ID M18262; SV 1; linear; genomic DNA; STD; UNC; 2053 BP. XX AC M18262; X52972; XX DT 16-JUL-1988 (Rel. 16, Created) DT 15-JAN-2007 (Rel. 90, Last updated, Version 13) XX DE Plasmid pCU1 (from E.coli) DNA fragment with direct and inverted repeats. XX KW complete genome; direct repeat; inverted repeat. XX OS Plasmid pCU1 OC other sequences; plasmids. OG Plasmid pCU1 XX RN [1] RP 1-2053 RX DOI; 10.1016/0378-1119(87)90377-5. RX PUBMED; 2828186. RA Kozlowski M., Thatte V., Lau P.C., Visentin L.P., Iyer V.N.; RT "Isolation and structure of the replicon of the promiscuous plasmid pCU1"; RL Gene 58(2-3):217-228(1987). XX RN [2] RP 1-2053 RX DOI; 10.1016/0378-1119(90)90155-K. RX PUBMED; 2205534. RA Krishnan B.R., Fobert P.R., Seitzer U., Iyer V.N.; RT "Mutations within the replicon of the IncN plasmid pCU1 that affect its RT Escherichia coli polA-independence but not its autonomous replication RT ability"; RL Gene 91(1):1-7(1990). XX DR GOA; P18352. DR InterPro; IPR011991; WHTH_trsnscrt_rep_DNA-bd. DR UniProtKB/Swiss-Prot; P18352; YPC3_ECOLX. XX CC On Feb 26, 2002 this sequence version replaced gi:45571. XX FH Key Location/Qualifiers FH FT source 1..2053 FT /organism="Plasmid pCU1" FT /plasmid="pCU1" FT /host="Escherichia coli" FT /mol_type="genomic DNA" FT /clone="pCU32" FT /db_xref="taxon:2543" FT repeat_region 406..424 FT /note="group III inverted repeat" FT repeat_region 415..444 FT /note="group II direct repeat" FT repeat_region 460..479 FT /note="group II direct partial repeat" FT CDS 471..611 FT /codon_start=1 FT /transl_table=11 FT /product="unknown protein" FT /note="ORF46" FT /db_xref="UniProtKB/Swiss-Prot:P19755" FT /protein_id="AAA98067.1" FT /translation="MGISPPCYGNWPTLDETVKNVFTCLNFVVVWRVIFNPQRQGSWIS FT C" FT repeat_region 481..510 FT /note="group II direct repeat" FT CDS 596..1315 FT /codon_start=1 FT /transl_table=11 FT /product="unknown protein" FT /note="ORF239" FT /db_xref="GOA:P18351" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:P18351" FT /protein_id="AAA98068.1" FT /translation="MDKLLNKKIKVKQSNELTEAAYYLSLKAKRVLWLCLMQTYFTASV FT SEDDDEMAVLGDSTFKVKVADYQQIFQVSRNQAIKDVKEGVFELSRSAVIFYPKEGSFD FT CVARPWLTEAGSRSARGIWEIEFNHKLLRYIYGLTNQFTTYSLRDCGSLRNPRTIRLYE FT SLAQFKSSGLWVTTHAWLNDRFLLPESQQKNLAELKRSFLDPALKQINEKTPLLAKYSI FT DDSGKFLFSIIDKQNPV" FT CDS 704..1315 FT /codon_start=1 FT /transl_table=11 FT /product="unknown protein" FT /note="ORF203" FT /db_xref="GOA:P18351" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:P18351" FT /protein_id="AAA98069.1" FT /translation="MQTYFTASVSEDDDEMAVLGDSTFKVKVADYQQIFQVSRNQAIKD FT VKEGVFELSRSAVIFYPKEGSFDCVARPWLTEAGSRSARGIWEIEFNHKLLRYIYGLTN FT QFTTYSLRDCGSLRNPRTIRLYESLAQFKSSGLWVTTHAWLNDRFLLPESQQKNLAELK FT RSFLDPALKQINEKTPLLAKYSIDDSGKFLFSIIDKQNPV" FT CDS 749..1315 FT /codon_start=1 FT /transl_table=11 FT /product="unknown protein" FT /note="ORF188" FT /db_xref="GOA:P18351" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:P18351" FT /protein_id="AAA98070.1" FT /translation="MAVLGDSTFKVKVADYQQIFQVSRNQAIKDVKEGVFELSRSAVIF FT YPKEGSFDCVARPWLTEAGSRSARGIWEIEFNHKLLRYIYGLTNQFTTYSLRDCGSLRN FT PRTIRLYESLAQFKSSGLWVTTHAWLNDRFLLPESQQKNLAELKRSFLDPALKQINEKT FT PLLAKYSIDDSGKFLFSIIDKQNPV" FT CDS complement(1126..1863) FT /codon_start=1 FT /transl_table=11 FT /product="unknown protein" FT /note="ORF 245" FT /db_xref="UniProtKB/Swiss-Prot:P18128" FT /protein_id="AAA98072.1" FT /translation="MEIRPPCRAPVPCGNPPTLPGAGAVWKSAHLAGRRCCVEIRPPCR FT APVPCGNPPTLPGAGAVWESAHLAGRRCRVGIRPPCRAPVLCGNPPTLPGAGAVWESAH FT LAGRRCRVGIRPPCRAPVLCGNPPTVAGRRCRVGIRPPCRASVPCGNPPTLPGAGAVWK FT FAHLHDKNLSNDRLMCADLCQTGFCLSIIENRNFPESSILYLASKGVFSFICLRAGSRK FT DRFNSAKFFCWDSGKRKRSFNQA" FT CDS complement(1126..1332) FT /codon_start=1 FT /transl_table=11 FT /product="unknown protein" FT /note="ORF 68" FT /db_xref="UniProtKB/Swiss-Prot:P18128" FT /protein_id="AAA98071.1" FT /translation="MCADLCQTGFCLSIIENRNFPESSILYLASKGVFSFICLRAGSRK FT DRFNSAKFFCWDSGKRKRSFNQA" FT repeat_region 1367..1403 FT /note="group I direct repeat" FT repeat_region 1399..1417 FT /note="group III inverted repeat" FT repeat_region 1404..1440 FT /note="group I direct repeat" FT repeat_region 1436..1454 FT /note="group III inverted repeat" FT repeat_region 1441..1477 FT /note="group I direct repeat" FT repeat_region 1473..1492 FT /note="group III inverted repeat" FT repeat_region 1479..1515 FT /note="group I direct repeat" FT repeat_region 1511..1529 FT /note="group III inverted repeat" FT repeat_region 1516..1552 FT /note="group I direct repeat" FT repeat_region 1548..1566 FT /note="group III inverted repeat" FT repeat_region 1553..1589 FT /note="group I direct repeat" FT repeat_region 1585..1603 FT /note="group III inverted repeat" FT repeat_region 1590..1626 FT /note="group I direct repeat" FT repeat_region 1622..1640 FT /note="group III inverted repeat" FT repeat_region 1627..1663 FT /note="group I direct repeat" FT repeat_region 1659..1677 FT /note="group III inverted repeat" FT repeat_region 1664..1700 FT /note="group I direct repeat" FT repeat_region 1696..1714 FT /note="group III inverted repeat" FT repeat_region 1701..1737 FT /note="group I direct repeat" FT repeat_region 1733..1751 FT /note="group III inverted repeat" FT repeat_region 1738..1774 FT /note="group I direct repeat" FT repeat_region 1770..1788 FT /note="group III inverted repeat" FT repeat_region 1775..1811 FT /note="group I direct repeat" FT repeat_region 1807..1825 FT /note="group III inverted repeat" FT repeat_region 1812..1848 FT /note="group I direct repeat" FT repeat_region 1844..1862 FT /note="group III inverted repeat" FT repeat_region 1849..1862 FT /note="group I direct partial repeat" XX SQ Sequence 2053 BP; 494 A; 524 C; 547 G; 488 T; 0 other; ctgtttccat tctgtttctg aaattctgtt tttctgagcc atctgtgggc ctccgtagtt 60 ttggttacag aaaggatata ctcagaataa ataggggtca atacaagtac gatttttata 120 aactttattt tatttgaggg tgaggcccgg tgcggcacga gcgcggcgtt gatggtgccg 180 cgaaaggtgc ctggcgccat gcttggatta aaacatgaac cgtgaagaac tgcgaaactt 240 gttttcgcgg ttctgagggg ttgaccgagc cgcgaagtgg taagcgatga tatgcacata 300 tccacaggca tatttttaaa aggtatttta tagatttttt atctttttaa agtcttttag 360 agctatataa ctcattgatt taaaatcata aataagtgtt atctctggga atccgcccac 420 cttgttatgg gaattggccc acctatctat gggaaacacc ccaccttact atgggaatta 480 gcccaccttg ttatgggaat tggcccacct tagacgaaac tgtaaaaaat gtatttactt 540 gtttgaactt tgtggtagtg tggagagtaa tttttaaccc acaaaggcaa ggctcatgga 600 taagttgctg aacaaaaaga taaaagttaa gcagtctaac gagcttaccg aagctgctta 660 ctacctctcg ctaaaagcaa agcgcgttct ctggttatgt cttatgcaga cgtatttcac 720 agcttcagta agcgaagatg atgatgagat ggctgtactc ggtgactcta ctttcaaagt 780 aaaggtggct gactatcagc aaatttttca ggtaagccgt aaccaggcta tcaaggatgt 840 taaagaaggc gtgtttgagt taagccgttc tgcggtaatc ttttacccga aagaagggag 900 ttttgactgc gtcgcgcgcc cctggctaac agaggctggc agccgatcag ctcgtggtat 960 ctgggaaatc gaatttaacc ataaactcct gcggtacatt tacggcctga cgaaccagtt 1020 caccacctac tcgctccgcg attgtggcag tcttcgaaat ccacggacga tccgccttta 1080 tgaaagtctt gctcaattca aatcttcagg cttatgggtt actactcatg cttggttaaa 1140 tgaccgtttc cttttgccgg aatcccaaca gaagaacttg gcagagttga aacgatcttt 1200 ccttgatcct gctctcaagc agataaatga gaaaacacct ttacttgcta agtatagtat 1260 tgatgattca ggaaaatttc tgttctcaat aattgataag caaaatcccg tctgacataa 1320 atcagcacac atgagcctgt catttgacaa atttttgtca tgaagatggg cgaatttcca 1380 cacagcaccg gcgcccggca aggtgggcgg attcccacac ggcaccgacg cccggcaagg 1440 tgggcggatt cccacacggc accggcgccc ggcaacggtg ggcggatttc cacacagcac 1500 cggcgcccgg caaggtgggc ggattcccac acggcaccgg cgcccggcaa ggtgggcgga 1560 ttcccacaca gcaccggcgc ccggcaaggt gggcggattt ccacacagca ccggcgcccg 1620 gcaaggtggg cggattccca cacggcaccg gcgcccggca aggtgggcgg attcccacac 1680 ggcaccggcg cccggcaagg tgggcggatt cccacacggc accggcgccc ggcaaggtgg 1740 gcggatttcc acacagcacc ggcgcccggc aaggtgggcg gatttccaca cagcaccggc 1800 gcccggcaag gtgggcggat ttccacacgg caccggcgcc cggcaaggtg ggcggatttc 1860 cataacttta attatacctt tgtgttattt gtggattgtg cagctcagtg gggcgctggc 1920 cgtgacggtg cggtgtcccc cgtaaccggc cgcgcggccg ctaactcgca gtacggcgcc 1980 gcgacccgca gcgggccgcc gtacccgcgc cgcacggcgc ccactgcgca cccccgtgga 2040 ggacgtgcgg cag 2053 //