ID L25529; SV 1; circular; genomic DNA; STD; UNC; 2926 BP. XX AC L25529; XX DT 04-JAN-1995 (Rel. 42, Created) DT 15-JAN-2007 (Rel. 90, Last updated, Version 7) XX DE Plasmid pCI411, complete sequence. XX KW . XX OS Plasmid pCI411 OC other sequences; plasmids. OG Plasmid pCI411 XX RN [1] RP 1-2926 RX PUBMED; 7952178. RA Coffey A., Harrington A., Kearney K., Daly C., Fitzgerald G.; RT "Nucleotide sequence and structural organization of the small, RT broad-host-range plasmid pCI411 from Leuconostoc lactis 533"; RL Microbiology (Reading, Engl.) 140(Pt 9):2263-2269(1994). XX RN [2] RP 1-2926 RA Coffey A., Harrington A., Kearney K., Daly C., Fitzgerald G.; RT ; RL Submitted (20-JUL-1994) to the INSDC. XX FH Key Location/Qualifiers FH FT source 1..2926 FT /organism="Plasmid pCI411" FT /plasmid="pCI411" FT /host="Leuconostoc lactis 533" FT /mol_type="genomic DNA" FT /note="CI4REPAB; cryptic rolling circle plasmid" FT /db_xref="taxon:35412" FT misc_feature 22..41 FT /note="recombination site A" FT repeat_region 232..276 FT /rpt_type=DIRECT FT repeat_region 251..301 FT /rpt_type=DIRECT FT stem_loop 346..385 FT /note="346" FT repeat_region 406..441 FT /rpt_type=DIRECT FT misc_feature 423..440 FT /note="recombination site A" FT repeat_region 575..612 FT /rpt_type=DIRECT FT repeat_region 617..642 FT /rpt_type=DIRECT FT repeat_region 654..692 FT /rpt_type=DIRECT FT stem_loop 806..866 FT /note="346" FT stem_loop 1020..1056 FT /note="346" FT repeat_region 1170..1192 FT /rpt_type=DIRECT FT rep_origin 1201..1221 FT /note="nick site for replication initiation protein; plus FT origin; putative" FT stem_loop 1314..1381 FT /note="346" FT stem_loop 1548..1623 FT /note="346" FT gene 1638..2264 FT /gene="repB" FT CDS 1638..2264 FT /codon_start=1 FT /transl_table=11 FT /gene="repB" FT /product="replication initiation protein" FT /function="plasmid replication by rolling circle mechanism" FT /note="topoisomerase" FT /db_xref="GOA:Q52222" FT /db_xref="InterPro:IPR002631" FT /db_xref="UniProtKB/TrEMBL:Q52222" FT /protein_id="AAA66485.1" FT /translation="MVEKDIQNDEKDNRVRNWSWIVYPESAPENWRQLLDETGEKWIES FT PLHDKDINETTDEIKKPHWHIIISFTNKKSYKQALYISEMMNAPEPKKVASLQGSVQYL FT WHRNNPEKYQYDKSEVVAHNGFKYRQYLTDVGVDTDVILQEIVQWIRESNCYEYGDLVD FT YAVSEKFDDWFPTVRSQTIFLTAYLRSNRHKPFKKIDRETGEILE" FT gene 2261..2431 FT /gene="repA" FT CDS 2261..2431 FT /codon_start=1 FT /transl_table=11 FT /gene="repA" FT /product="repressor protein" FT /db_xref="UniProtKB/TrEMBL:Q52223" FT /protein_id="AAA66486.1" FT /translation="MMDREKELQAEIKDLKKENEELKKRIERYREIEVELSTEVDLLSY FT TLHGSPTGIIK" FT repeat_region 2306..2336 FT /rpt_type=DIRECT FT CDS 2444..2761 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="label:ORF3" FT /note="ORF3" FT /db_xref="UniProtKB/TrEMBL:Q52224" FT /protein_id="AAA66487.1" FT /translation="MIYATGISFNENDVHDLKSIVQIKLESTEDETWTVDDEKIQGWYK FT KEAIHIWLKSKGEQGFKIKVKLSPYSELEAVESNGVKYVRAVADDTEKNNLLKLKAYTE FT Q" XX SQ Sequence 2926 BP; 1024 A; 434 C; 593 G; 875 T; 0 other; gagctcacac tttataacat aaagtatagt gagttatact tcgatgccgt ttatcaggaa 60 cgtaagtacg gcagagagga cataaacaaa gagactggtg agatacaaaa ttaattataa 120 aatgggaagt gggtgctcaa aatgagcgcc cttttttgtt gcggctagcc gacttctgat 180 acatttttta agcacaaaaa ccacccaatt ttggagtggt gtgtaagtgc gcattgcttt 240 aaaaatagca atgaaaaaat cattgcttag aagttataca agattaaaaa ataagttgct 300 ttattgacgt tgagcttcgg aatccttaac aatcccaaaa cttgtcgaat ggtcggctta 360 atagctcacg ctacgccgac attcgtcttc aagtttagtt aagggttctt ctcaacataa 420 ataaattttc tcggcataaa tgtgtcataa aactaataga aaaagtgcat tatagtcata 480 atcaaagtta ataaacaagc taataacgta acattacgag ctttggttgt gttctgattc 540 ccatttctat attctttcat aacaaataac caagaaagaa ttactaaaat tcctaaaata 600 attgcaaaaa ttttcatttt taaaactcct ttttagtaaa ctttatcaca atagttatcg 660 atttacaggt ctatttttgt cgttatgatt tagttaagtc ccataagggt gcacttatac 720 tctaaataaa ttggagttgt gctaaaacac ttgaacctgt atcagatttc actttgctca 780 aacaaaactg actttcgtca gttggaatct tcaaagccga taaagtccag tcgccaactc 840 ctccagactt atcggctttg aagattgctt ttaaatgcct ctaatttgct ctctaagcca 900 ttttagctgt tacctgtata atttactgtc cgtcaacggt aaatcgacgt agaacggctt 960 ttagccgttc tgggaggctt taaggagttg acggactcgc taggccaaga cacttttgcg 1020 catgcaaaga aaagcaaccc tgcttttttt gcctgcctca cggcgagtgc ggggtgagtt 1080 tgagcggggg ctccctatct ataggcggtc aagctggcgc acgttggact gggtttgggg 1140 cgtcaaccat gattttgatt tggtttgagt gggataaaaa ttgggagaaa aacatggggg 1200 tactacaaca cccccctatg tggtcatttg gtcatttggt caaaatggct agaaacgttg 1260 atatgacatg gctcaatttt tgaaccacaa aatttggttt tttttggtca tggtcaaaaa 1320 agtaacactt ttcttacttt tttgttgctg aacagtaaga aaagtgttac tcttattttg 1380 aaaagataaa aaaagaaggt ggtggtcatt ttggtaagca atgataaaaa gagagtgatg 1440 ttaactctaa caaaagaagt tgctgatgat ttagaaaaaa atgcaaaaag tatggggtta 1500 agtaagtctt cacttattac ttcttggatt aacgaaaata gaaaggaatc tgaacaaaaa 1560 aaataagcga tttccgcatt ttttgagaga aacggaaatc gctattcttg cttttgtttt 1620 gataaggtaa ttatagcatg gttgaaaaag atattcaaaa cgatgaaaaa gataatcgtg 1680 ttaggaattg gagttggatt gtatatcctg aatcagctcc tgaaaattgg agacaattgt 1740 tagatgaaac aggagaaaag tggatagaaa gcccactgca tgataaagat ataaacgaaa 1800 cgactgatga aataaaaaaa cctcactggc atataataat ttcgtttact aacaaaaaaa 1860 gctataaaca agcgttatat atctctgaaa tgatgaatgc accagaacca aaaaaagttg 1920 ctagtttaca aggttcagtt caatatttgt ggcacagaaa caatcctgaa aagtatcagt 1980 atgataaaag tgaagttgtt gctcataatg gttttaaata tcgtcaatat ttaacagatg 2040 ttggagtaga tacggatgtc attctgcaag aaatagtgca atggattcgt gaatctaact 2100 gttatgaata tggggattta gttgattatg ctgtatctga aaagttcgat gattggtttc 2160 ccaccgttag aagtcaaacg atctttttaa ctgcttatct acgctctaat cgtcataagc 2220 cttttaaaaa aatagataga gaaactggag agatattgga atgatggata gagaaaaaga 2280 attacaagct gaaattaaag atttaaaaaa agagaacgaa gaattaaaaa agcgaattga 2340 gagatatagg gaaattgaag tggaattatc aacggaagtt gatttactga gttatacttt 2400 acatggaagt cctaccggaa taataaaatg aggaggtgat ttaatgattt atgcaacagg 2460 aattagtttt aatgagaatg atgttcatga tctaaaaagt attgttcaaa ttaagttaga 2520 atcaaccgaa gatgaaactt ggacagttga tgatgaaaaa attcagggat ggtacaaaaa 2580 agaagctatt catatttggc tcaaatcaaa aggagaacaa ggatttaaaa ttaaagttaa 2640 attatctcca tattctgagt tagaagctgt cgaaagtaat ggtgttaaat atgttcgcgc 2700 agtagcagat gatactgaaa aaaataattt gttaaaattg aaggcttata ctgagcagta 2760 gtttttaatt tggtatgtag ccgtagccct gcatgagcga gagcgctact aactagcctt 2820 aaagttacgt aaaaaaacag ccaaaatttt cgataacgag agcggaattt ttcgtcagaa 2880 aaataagcgg tggggtctgt cccactggca aggcgtccct ctgaaa 2926 //