ID L22695; SV 1; linear; genomic DNA; STD; VRL; 8607 BP. XX AC L22695; XX DT 30-JAN-1995 (Rel. 42, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Canine oral papillomavirus complete genome. XX KW . XX OS Canine oral papillomavirus OC Viruses; dsDNA viruses, no RNA stage; Papillomaviridae; OC Lambdapapillomavirus. XX RN [1] RP 1-8607 RX DOI; 10.1006/viro.1994.1552. RX PUBMED; 8091677. RA Delius H., Van Ranst M.A., Jenson A.B., zur Hausen H., Sundberg J.P.; RT "Canine oral papillomavirus genomic sequence: a unique 1.5-kb intervening RT sequence between the E2 and L2 open reading frames"; RL Virology 204(1):447-452(1994). XX FH Key Location/Qualifiers FH FT source 1..8607 FT /organism="Canine oral papillomavirus" FT /mol_type="genomic DNA" FT /db_xref="taxon:35258" FT CDS 102..536 FT /codon_start=1 FT /gene="E6" FT /product="transforming protein" FT /note="E6 ORF from bp 1 to 536; putative" FT /db_xref="GOA:Q89808" FT /db_xref="InterPro:IPR001334" FT /db_xref="UniProtKB/Swiss-Prot:Q89808" FT /protein_id="AAA61744.1" FT /translation="MFWGALLSMERPTSVRDLCMSLKLSLLDLSLACKFCGNNITNIEK FT LLFDKAGFQLIWRENNAFGCCQYCARVCSVVEQCFGSHRHLTSEELVNVTKTLQQLSLR FT CLGCLSILSEADKELCAELNDFSVVRGKTRGLCSLCRLPP" FT CDS 533..826 FT /codon_start=1 FT /gene="E7" FT /product="transforming protein" FT /note="E7 ORF from bp 503 to 826; putative" FT /db_xref="GOA:Q89759" FT /db_xref="InterPro:IPR000148" FT /db_xref="UniProtKB/Swiss-Prot:Q89759" FT /protein_id="AAA61745.1" FT /translation="MIGQCATLLDIVLTEQPEPIDLQCYEQLPSSDEEEEEEEPTEKNV FT YRIEAACGFCGKGVRFFCLSQKEDLRVLQVTLLSLSLVCTTCVQTAKLDHGG" FT CDS 816..2609 FT /codon_start=1 FT /gene="E1" FT /product="replication protein" FT /note="E1 ORF from bp 768 to 2609; putative" FT /db_xref="GOA:Q89536" FT /db_xref="InterPro:IPR001177" FT /db_xref="InterPro:IPR014000" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR016393" FT /db_xref="UniProtKB/Swiss-Prot:Q89536" FT /protein_id="AAA61746.1" FT /translation="MAARKGTDSETEDGGWVLIEADCSEVDSADETSENASNVSDLVDN FT ASIAETQGLSLQLFQQQELTECEEQLQQLKRKFVQSPQSRDLCSLSPQLASISLTPRTS FT KKVKKQLFATDSGIQSSNEADDSLEGQRQVEPLPGREENGADALFKVRDKRAFLYSKFK FT SSFGISFTDLTRVYNSDKTCSSDWVVCLYHVSDDRREAGKTLLQDHCEYFFLHSMGFCT FT LLLLCLFVPKCRNTLFKLCRSLFHISNVQMLADPPKTRSPAVALYWYKKGFASGTFTHG FT ELPSWIAQQTLITHHLAAEKTFDLSEMVQWAYDNDLKDESEIAYKYAALAETDENALAF FT LKSNNQPKHVKDCATMCRYYKKAEMKRLSMSQWIDERCKATDDGPGDWKEVVKFLRHQG FT IEFILFLADFKRFLRGRPKKNCLVFWGPPNTGKSMFCMSLLSFLHGVVISYVNSKSHFW FT LQPLTEGKMGLLDDATRPCWLYIDTYLRNALDGNTFSVDCKHKAPLQLKCPPLLITTNV FT NVCGDEKFKYLRSRCSFFHFPQEFPLDDNGNPGFQLNDQSWASFFKRFWKHLDLSDPED FT GEDGETQRGLRLTARGTTESV" FT CDS 2551..3708 FT /codon_start=1 FT /gene="E2" FT /product="regulatory protein" FT /note="E2 ORF from bp 2530 to 3708; putative" FT /db_xref="GOA:Q89420" FT /db_xref="InterPro:IPR000427" FT /db_xref="InterPro:IPR001866" FT /db_xref="InterPro:IPR012677" FT /db_xref="UniProtKB/Swiss-Prot:Q89420" FT /protein_id="AAA61747.1" FT /translation="MEKLSEALDLLQEELLSLYEQNSQSLADQSRHWSLLRKEQVLLYY FT ARGKGIMRIGMQPVPPQSVSQAKAKQAIEQSLYIDSLLHSKYANEPWTLCDTSRERLVA FT EPAYTFKKGGKQIDVRYGDSEENIVRYVLWLDIYYQDEFDTWEKAHGKLDHKGLSYMHG FT TQQVYYVDFEEEANKYSETGKYEILNQPTTIPTTSAAGTSGPELPGHSASGSGACSLTP FT RKGPSRRPGRRSSRFPRRSGGRGRLGRGGSGELPPQPQPSSSWSPPSPQQVGSKHQLRT FT TSSAGGRLGRLLQEAYDPPVLVLAGDPNSLKCIRYRLSHKHRGLYLGASTTWKWTSGGD FT GASKHDRGSARMLLAFLSDQQREDFMDRVTFPKSVRVFRGGLDEL" FT CDS <3116..3463 FT /codon_start=1 FT /gene="E4" FT /note="5' end derived by splicing; putative" FT /db_xref="UniProtKB/TrEMBL:Q84278" FT /protein_id="AAA61748.1" FT /translation="TNPLLFPPPVPPEPPDRNSPVTPPRGPVPVPLPPGKGRHGGLDGG FT RRGSPEGQEDEEDSDEEEAENYPPSRSRPRRGRRRLHNKWDQNINYEPPAAPEDDWEDF FT CKKLTIPQFLF" FT CDS 5288..6829 FT /codon_start=1 FT /gene="L2" FT /product="minor capsid protein" FT /note="L2 ORF from bp 5267 to 6829.; putative" FT /db_xref="GOA:Q89892" FT /db_xref="InterPro:IPR000784" FT /db_xref="UniProtKB/Swiss-Prot:Q89892" FT /protein_id="AAA61749.1" FT /translation="MALIRKRRAAPQDIYPACKVSNTCPADILNKMEQNTLADKILKYG FT SAGVFLGGLGISTGKGVGGRTGYIPLGGTESGVGVGTRVTTIRPTVPISSVGSPDFIPV FT DAVDPLGPAVIPPERFPIAVEDPFTLPPPRFPTAVEEDVIELQPIPGPSSEIPLAGPKI FT TTDAQPAILEVIPETRPPKVITRHQYSNPAFEVSITSNSGAGESSASDHVLVEGFSGGH FT SIGEHIPLQDLAPSRPSFSETIEDETAFSSSTPKQGSRSERPKSYYNRRRYQQVQVTDP FT VFISRPRSLVTFDNPAFDESVDLIFERDVAEITAAPHADFTDITKLTKPAYHRGPSGHV FT RVSRLGHRANIKTRSGLTIGPQSHFYYDVSSIDPAESFELQALGNVSSAEQTGEAVISS FT GTGDFEIISLEDSILESYNDEDLIDVFEDVARDLHLLVGERRQQPIQVQRYIKPFSFVN FT EGVHIIHPGSESDFWLPPVTPDSTPAIVIDILDSSADYYLHPSLIKKRKRKHFFF" FT CDS 6837..8348 FT /codon_start=1 FT /gene="L1" FT /product="major capsid protein" FT /note="L1 ORF from bp 6798 to 8348.; putative" FT /db_xref="GOA:Q89828" FT /db_xref="InterPro:IPR002210" FT /db_xref="InterPro:IPR011222" FT /db_xref="UniProtKB/Swiss-Prot:Q89828" FT /protein_id="AAA61750.1" FT /translation="MAVWLPAQNKFYLPPQPSTKVLSTDEYVSRTNIFYHASSERLLTV FT GHPFYEIYKEERSEEVIVPKVSPNQYRVFRLLLPDPNNFAFGDKSLFDPEKERLVWGLR FT GLEIGRGQPLGISVTGHPTFDRYNDVENPNKNLAGHGGGTDSRVNMGLDPKQTQMFMIG FT CKPALGEHWSLTRWCTGQVHTAGQCPPIELRNTTIEDGDMVDIGFGAMDFKALQHYKSG FT VPIDIVNSACKYPDYLKMANEPYGDRCFFFVRREQLYARHIMSRSGTQGLEPVPKDTYA FT TREDNNIGTTNYFSTPSGSLVSSEGQLFNRPYWIQRSQGKNNGIAWGNQLFLTVVDNTR FT GTPLTINIGQQDKPEEGNYVPSSYRTYLRHVEEYEVSIIVQLCKVKLSPENLAIIHTMD FT PNIIEDWHLNVTPPSGTLDDTYRYINSLATKCPTNIPPKTNVDPFADFKFWEVDLKDKM FT TEQLDQTPLGRKFLFQTNVLRPRSVKVRSTSHVSVKRKAVKRKRK" XX SQ Sequence 8607 BP; 2630 A; 1674 C; 1905 G; 2398 T; 0 other; aaaaggtgtg ttctcttatt gtagctaaca acaatcttac ttacagtaaa attccaagac 60 cgatttcggt cctggcaact gtttcggtcg gtatatatag catgttttgg ggggcactgt 120 tatcaatgga gcgcccgacg tcggtgagag atctttgcat gtctctaaag ctctctttgc 180 ttgatctgtc gcttgcttgc aaattttgtg gcaataatat aacaaatata gaaaagctgc 240 tttttgataa agctggtttt cagttaatct ggcgagaaaa caacgcattt ggatgctgtc 300 agtactgtgc aagagtctgc agcgttgtgg agcaatgttt tggaagccac agacacttga 360 cttctgagga gcttgtcaac gtaacaaaga ccttgcagca gcttagtctt agatgtttag 420 gatgcctcag tattctgagt gaggcggaca aagaactatg tgctgaattg aacgattttt 480 ctgtggtcag ggggaaaact aggggcttgt gttcgctgtg ccgattacca ccatgattgg 540 gcaatgcgca acccttttgg atattgtgct gacagagcag ccggagccga tagacttgca 600 atgctatgaa caattaccat cgtctgacga ggaggaggag gaggaggagc caactgaaaa 660 aaatgtttac agaatagagg ctgcctgtgg attttgtggg aaaggggtga ggtttttttg 720 tctgtctcaa aaagaggatc tgcgtgtgct gcaggtcact ttgctgagcc tcagcctggt 780 gtgcaccacc tgtgtgcaga ccgccaagct tgaccatggc ggctagaaaa ggtactgact 840 ctgagactga ggatggtggt tgggtactaa tagaggcaga ttgtagtgag gtagactctg 900 cagatgaaac cagtgaaaat gcaagtaatg tctctgatct tgtagacaat gcgagcattg 960 cagaaacaca gggactttcc ctgcaactgt ttcaacagca agagctgact gaatgtgaag 1020 agcagttgca gcagctaaaa cgaaagtttg tacaaagccc gcaatctcgg gatttgtgta 1080 gccttagtcc gcaattggca agcattagct taacgccacg gacgtctaaa aaggttaaaa 1140 agcagctgtt tgcaactgat agtggcattc agtccagcaa tgaagctgat gattctcttg 1200 aggggcaaag acaggtagaa ccgttgccgg gtcgggaaga aaatggcgcc gatgcattgt 1260 ttaaagtgag ggataagcgc gcctttttgt attcaaaatt taaatcttcg tttggaataa 1320 gctttacaga tttaactaga gtttataata gtgataaaac ttgcagctcg gattgggtag 1380 tatgtcttta tcatgtatct gatgatagaa gagaggcagg aaaaacatta ttgcaggatc 1440 attgtgaata tttttttttg cattcaatgg ggttttgtac tttgttatta ttatgtttgt 1500 ttgtgcctaa gtgtagaaat actttgttta aattatgtag aagtttattt catataagta 1560 atgtacagat gttggctgat cctcctaaaa ctagaagtcc tgcagttgca ttatattggt 1620 ataaaaaagg gtttgcatca ggtacattta cacacggaga gttgccaagt tggatagctc 1680 agcagacact aataacacat catttagctg cagagaaaac ctttgatttg agtgagatgg 1740 ttcagtgggc ttatgataat gatctgaaag acgagtctga aattgcatac aaatatgcag 1800 cattagcaga aacagatgaa aatgctttag cttttttaaa gtctaataac cagcctaaac 1860 atgtaaaaga ctgtgcaaca atgtgcagat attataaaaa agctgaaatg aaaagattaa 1920 gtatgtctca gtggatagac gaaagatgca aggctactga tgatggtcca ggtgattgga 1980 aggaagttgt gaaattttta agacatcaag ggatagaatt tattttgttt ttggcagact 2040 ttaaaagatt tttgagaggt aggcctaaaa aaaattgcct tgtattctgg ggtcctccaa 2100 atacaggcaa gtctatgttt tgcatgagcc tgcttagttt tttgcacgga gtagttattt 2160 catatgtcaa tagcaaaagt catttttggc tgcaacctct tacagagggg aaaatgggtc 2220 tgttagatga tgccactagg ccttgctggc tctatataga cacttatttg agaaatgctc 2280 tagatggcaa tacatttagt gttgattgca agcacaaagc gcctttgcaa ctaaaatgcc 2340 cgcctctgct gattactact aatgtcaatg tttgtggaga tgaaaaattt aaatatcttc 2400 gcagcagatg ctctttcttt cattttccac aagaatttcc tttggatgac aatggaaatc 2460 ctggctttca gttaaatgac caaagctggg cttctttttt taaaaggttc tggaaacatt 2520 tagatttaag tgaccctgaa gacggggaag atggagaaac tcagcgaggc cttagactta 2580 ctgcaagagg aactactgag tctgtatgag cagaatagcc aaagtcttgc agaccaatca 2640 aggcactggt cattgctcag aaaagagcaa gtcctacttt attatgccag aggcaagggc 2700 ataatgagga taggcatgca gcctgtgcct ccacagtctg tgtctcaagc caaagctaag 2760 caggccatag agcagtcact ttacatagac agcttgttac actcaaagta tgcaaatgaa 2820 ccgtggacac tatgcgatac aagcagggag aggttggttg cagaacctgc atacaccttc 2880 aaaaaaggtg gaaagcagat tgatgtcaga tatggtgaca gtgaggaaaa cattgtcaga 2940 tatgtattgt ggctggatat ctattaccag gatgagtttg acacctggga aaaagcacat 3000 ggcaagctag atcacaaagg actctcatac atgcatggga ctcagcaggt gtattatgtg 3060 gactttgaag aggaggccaa caaatatagc gagactggga aatatgagat tctaaaccaa 3120 cccactacta ttcccaccac cagtgccgcc ggaacctccg gaccggaact ccccggtcac 3180 tccgcctcgg ggtccggtgc ctgttccctt acccccagga aagggccgtc acggcggcct 3240 ggacggaggt cgtcgcggtt ccccagaagg tcaggaggac gaggaagact cggacgagga 3300 ggaagcggag aattaccccc ccagccgcag ccgtcctcgt cgtggtcgcc gccgtctcca 3360 caacaagtgg gatcaaaaca tcaactacga accaccagca gcgccggagg acgactggga 3420 agacttctgc aagaagctta cgatccccca gttcttgttt tagctgggga tcctaatagt 3480 ttaaaatgca taagatatag attaagtcat aagcataggg ggttatattt gggggccagc 3540 acgacgtgga aatggacatc aggcggggat ggagcatcta agcatgaccg gggcagtgcg 3600 cggatgctgt tagcattttt aagtgatcaa caacgggagg actttatgga cagagtgact 3660 tttcctaagt ctgtgcgagt atttcgggga gggttagatg agttataagg gagggagggg 3720 gggatggtgt ggtgaagggg accaaaaaaa aaaggttaac aggtgtagta aggtgttggg 3780 acatataact gaaagggtgg ttcataagaa tttcagccag agctttaata tttacagagt 3840 caacaaacgt tagtctctta gcctaaaaat ttaagcagtt taaagcataa gcaaacaatc 3900 tttcattatt tttctttttt tttttttttt tttagtgtgt agacttcaca gaagagggca 3960 aaacaaaaac attgtgtgta gtgttagata acagtcatat tttagctacc atagtcttat 4020 ttttttttct ctgttttgtt ttaagtcacc atttattcac tgcgaaaata ccatcatata 4080 ttcttagcct agctatattc atcagtttta gaccattatc cattagttgc taagttagtg 4140 ttaggtaaca acgcttaggt aaacaacaga aaagatcata gtgtttacaa caacaacaag 4200 atagttaaag tgaacaacga caagtccgac agtccaaccc tactttgtgt ttatttgtct 4260 ctcgtatagt ataaggcata tagtatcagt taagttagaa aatgtgtaaa taagccagat 4320 atatcgatat ccaattaggc aagtgaaact tcaatatgtt tattgcagtc tccaaattta 4380 gtttagtttg atatgttgtc tgattagatt atattgcagt tgggagaata tcaagaacac 4440 accatccaca gacaaatgca ttgacatcgg aacaaaaaga aagaaaagaa gtagaaaatg 4500 ggaatgaaag tttgaatgaa tgctgttaat tttgttccat ttgtacctgt tatagctatc 4560 tcttttttgg tcgatccttt gtgatcctct gtactatact gtgaaaacca gtggaattca 4620 gaaactctac tacttataag ctgtcccccc cacctgctct ttcatcatac tgtaaaactg 4680 tttactgttc aactacaata ctgttatact gttttctggg caccttctct ctcactagca 4740 aaacaatggt tcactgaaaa atccagtata ttgtaaatat tgtatataca aagttttgaa 4800 attgttcaca actgtataac ctgtagaaca tctctgcatt tcttcacatg tcttacatag 4860 gataacacac atttgcaaat tgttctgagt tgttgcatac tccataagtt ccttttgaag 4920 ttcctctttt ttttttttgt agaaatcctt aagttttttt atattgtacc ggcagtcaca 4980 gtaggtgttt gaatctagaa taactacatc atacatacca tcaaatcaaa ccatcagtga 5040 aacatcatca gctttaatgt caaaagcaat catagcatta gcactgttgc ataagtccaa 5100 aaactactcg acccccctac ccgcttatct gaccaagagt ctgtgtgcgg acatctgagc 5160 acattgtaaa tacatttaac cgctaaaacc ccgtgcagca aaggaaagac aaaaaaaagt 5220 ccccgctgtc acaaccgtga cagcaaagaa agacaaaaaa aaataaaaaa catccctcgc 5280 ttacgcaatg gcattgatca ggaaaagacg cgcagcccct caagatatat accctgcttg 5340 taaagtgtcc aacacttgcc ccgctgatat tttgaataaa atggagcaaa atacgcttgc 5400 agataaaatc ctcaaatatg gtagtgctgg tgtttttttg gggggtctag gaatatcaac 5460 aggcaaaggg gtaggggggc gcacaggtta cattcctttg ggaggaacag aaagtggagt 5520 gggtgtaggc acaagggtca caacaataag acctactgtc ccaataagca gtgtggggtc 5580 tcctgacttt attcctgtag atgcagtaga ccctctaggg cctgcagtca tacccccaga 5640 aagatttcct atagcagtag aggatccttt tactctacct ccaccacgtt tcccaactgc 5700 agtagaagaa gatgtaattg agctgcagcc tattccaggc ccctcatctg aaatcccact 5760 cgctggccct aagattacca ctgatgctca gcctgcaata ttggaagtca taccagagac 5820 taggcctcct aaagtaatca ctaggcatca gtacagtaac cctgcatttg aggtgtccat 5880 tacttctaac tctggtgcag gggagtcttc tgcttctgac catgtgctgg tggaaggttt 5940 ttctggtggc cactcaattg gtgaacacat tccattgcaa gaccttgcac ccagcaggcc 6000 ttcattctct gagaccatag aagatgaaac tgcttttagc agcagtactc ctaaacaagg 6060 ctctagatct gaaaggccta aaagttacta taataggcga agatatcagc aagtacaagt 6120 tactgaccct gtgtttattt caagaccacg gtcacttgtc acgtttgata acccagcctt 6180 tgatgaatct gttgacctga tatttgaaag agatgttgca gaaataactg cagcacctca 6240 tgcagacttt acagatatca caaagctcac aaagcctgca tatcacagag gcccatctgg 6300 ccatgtccgt gtcagtaggc ttggacatag agctaatata aaaactagaa gtggtcttac 6360 aatagggcca caaagccatt tttactacga tgtcagcagc attgaccctg cagaatcttt 6420 tgagctgcag gcacttggca atgtatccag tgctgaacaa acaggagaag cagtaatctc 6480 ctctggcaca ggagactttg aaattataag ccttgaagac agtattttgg aatcctacaa 6540 tgatgaggat ttaatagacg tgtttgagga tgtagctaga gatttgcatt tattagttgg 6600 agaaagaagg cagcaaccga tccaagttca acgttacata aagccttttt cttttgttaa 6660 tgagggagta cacataattc acccaggatc tgagtcagat ttttggctgc ctcctgtaac 6720 gcctgacagc acacctgcaa tagtgattga cattttggac tcctctgcag attactatct 6780 gcatccaagt ttaataaaaa aacgcaaacg caaacatttt tttttttaat ttgcagatgg 6840 cggtttggct tcctgcacag aataaatttt accttccacc acagcccagc accaaggtct 6900 taagcacgga tgaatatgtc tccagaacaa atatttttta tcatgctagc agtgaacgtc 6960 ttcttactgt ggggcaccct ttttatgaaa tttataaaga agaacgttct gaagaggtta 7020 tagttcctaa agtatctcct aatcagtacc gggtattccg cttgctactt ccagacccta 7080 acaattttgc atttggagat aagtcattat ttgatcctga aaaagaaaga cttgtttggg 7140 gcttaagagg attagaaata ggtagggggc aaccattagg tataagtgtt acgggtcatc 7200 caacatttga cagatacaat gatgtagaaa acccaaacaa aaatcttgct ggacatggag 7260 gtggaacaga cagcagggtt aacatgggtt tagaccctaa acaaactcag atgtttatga 7320 tagggtgcaa accagcttta ggtgaacact ggtctttaac tagatggtgc acaggacagg 7380 tacacactgc aggacaatgt ccaccaatag aactgagaaa cacaacaata gaagatggag 7440 atatggtaga tatagggttt ggtgcaatgg attttaaggc tttgcagcat tataagtcag 7500 gagttccaat tgacatagta aattctgcat gcaaatatcc agactacctc aaaatggcaa 7560 atgagcctta tggagataga tgtttttttt ttgtaagaag agagcaactg tatgccagac 7620 atattatgtc cagatctggc acacaaggtt tagaaccagt ccccaaagat acctatgcaa 7680 caagagaaga caataacata ggaacaacta attacttctc cacacctagt ggctctctgg 7740 tttctagtga gggacaactg tttaacaggc cttactggat ccagcgctcg cagggcaaga 7800 ataatgggat tgcatggggc aatcagctgt ttttaacagt agtggacaac acacgaggaa 7860 ctcccttaac tataaacata gggcaacaag acaagccaga agaaggaaat tatgttcctt 7920 catcatacag aacctacctc agacatgttg aagaatatga agtaagcata attgtgcagc 7980 tgtgcaaagt taagctgtcc cctgaaaatc tagcaataat tcatactatg gatcctaata 8040 ttattgagga ttggcaccta aatgtcactc ctccatctgg tactttagat gacacatata 8100 ggtacataaa ctctcttgct actaagtgcc ctactaatat acctccaaaa actaacgttg 8160 atccttttgc agactttaaa ttttgggaag tagatcttaa agataaaatg actgaacagt 8220 tagaccaaac tccactgggt cgcaaatttt tattccagac aaatgtgtta cgtcctagat 8280 ctgtaaaagt acgttctacc tcgcacgttt ctgtcaaacg aaaagctgtg aaacgcaaac 8340 gcaaataatg tgtcattgat tacttgtgaa taaacagata attatttatg tccagttgtt 8400 gtggtcattg tttactgact gaccggcacc gcaccctgca catattgcac acagcaccag 8460 caaaggcagg ctaactcaga caagccggca cctgaattaa gcttttaatc tttttaatct 8520 taaaaatccc tttaatcttt tggagcgacc gttattggtt tggagtgacg cccggacatt 8580 cctgacaaga ccggattcgt tcgaccg 8607 //