ID   JF938082; SV 1; circular; genomic DNA; STD; VRL; 1818 BP.
XX
AC   JF938082;
XX
DT   10-AUG-2011 (Rel. 109, Created)
DT   20-OCT-2011 (Rel. 110, Last updated, Version 2)
XX
DE   Bat circovirus ZS/China/2011 isolate YN-BtCV-5, complete genome.
XX
KW   .
XX
OS   Bat circovirus ZS/China/2011
OC   Viruses; ssDNA viruses; Circoviridae; Circovirus; unclassified Circovirus.
XX
RN   [1]
RP   1-1818
RX   DOI; 10.1099/vir.0.034108-0.
RX   PUBMED; 21795473.
RA   Ge X., Li J., Peng C., Wu L., Yang X., Wu Y., Zhang Y., Shi Z.;
RT   "Genetic diversity of novel circular ssDNA viruses in bats in China";
RL   J. Gen. Virol. 92(Pt 11):2646-2653(2011).
XX
RN   [2]
RP   1-1818
RA   Ge X., Li J., Peng C., Wu L., Yang X., Wu Y., Zhang Y., Shi Z.;
RT   ;
RL   Submitted (09-MAY-2011) to the INSDC.
RL   Wuhan Institute of Virology, Chinese Academy of Sciences, 44 Xiao Hong
RL   Shan, Wuhan, Hubei 430071, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1818
FT                   /organism="Bat circovirus ZS/China/2011"
FT                   /host="bat"
FT                   /isolate="YN-BtCV-5"
FT                   /mol_type="genomic DNA"
FT                   /country="China"
FT                   /isolation_source="bat feces"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:1072162"
FT   CDS             45..905
FT                   /codon_start=1
FT                   /product="putative replication-associated protein"
FT                   /note="Rep protein"
FT                   /db_xref="GOA:G1D7G8"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:G1D7G8"
FT                   /protein_id="AEL87792.1"
FT                   /translation="MANSTVRRFCFTWNNPTELDFALCSEFIKKYCKYGIVGKEIAPTT
FT                   GTLHLQGFCNLQKPMRFSTIKQRLDNRIHLEKANGSDEENQKYCSKSGDFFEEGSPGFP
FT                   GRRTDLESLVSSIKNREVTTLKGVAEMHGACFIKYHRGIQAYMQQMVPIQPRDFKTEVY
FT                   FYWGPPGTGKSRRAAEEARTRFPNNPDTGRDEVYYKPRGLWWDGYEQQKAVVIDDFYGW
FT                   IKYDEMLKICDRYPYKVQIKGGFQEFKAEAIWITSNVSIDLLYRFTGYDPAALQRRMTC
FT                   IDYMD"
FT   CDS             complement(902..1570)
FT                   /codon_start=1
FT                   /product="putative capsid protein"
FT                   /note="Cap protein"
FT                   /db_xref="UniProtKB/TrEMBL:G1D7G9"
FT                   /protein_id="AEL87793.1"
FT                   /translation="MARFRRRVARRRPVRSIRRIRRRRRYGRRRSKFGCMMTKLTRLQT
FT                   FQADATKNTLQELHIQLAGFPEYLDVAQNFEFAKFVKVVTRIYPHQNVGNNSSSALGNY
FT                   ILFPYHKFIPARTSASDYLSIDKAKMYPSWRSAILRSVPSILTVTYANTGDTTRSDNIV
FT                   YRPKIPWWDTEHAKNLPTIYLGGMLYQGLSTAPAGSKATFTIKQDIYVKFFNQNTINDV
FT                   "
XX
SQ   Sequence 1818 BP; 543 A; 411 C; 417 G; 447 T; 0 other;
     ggcgccctcg atatataccg ggcgcccgct tggaaagttg cagaatggca aacagtacag        60
     tgcgtagatt ctgcttcacg tggaataatc ccacggagtt agatttcgct ctgtgtagtg       120
     aattcataaa gaagtattgc aaatatggca tcgttggaaa ggaaatcgct ccaacaaccg       180
     ggactctcca tttgcaaggg ttttgtaacc ttcaaaaacc catgcgcttc agtaccatca       240
     agcagcgtct cgataacaga atccatcttg agaaggcaaa tggatccgac gaagaaaacc       300
     aaaaatactg ttcaaaatca ggcgactttt ttgaagaggg gagtcccgga tttcccggac       360
     ggcgtacgga tctggagtcc ctcgtgtctt ccatcaagaa cagagaagtc accacactca       420
     aaggcgtggc tgagatgcat ggcgcctgtt ttatcaaata ccatcgtgga atacaagcat       480
     acatgcagca aatggtgccc attcaaccca gagattttaa aactgaagtc tatttctact       540
     ggggaccacc cggaaccggt aaatcgcgcc gcgctgctga ggaagcacga acaaggtttc       600
     ccaataaccc tgacacaggc agagatgaag tatactacaa gccgagagga ctctggtggg       660
     atggttacga acaacaaaaa gcagtggtaa tcgatgactt ctatggatgg atcaaatatg       720
     acgaaatgct aaaaatctgc gaccgttatc catacaaagt acaaataaaa ggagggtttc       780
     aagaattcaa agcagaagca atatggatta catcaaatgt atcaattgat ttattatata       840
     gatttactgg gtatgaccca gcggcattac aacgacgtat gacatgtatt gattatatgg       900
     attaaacatc attaattgta ttctgattaa agaatttcac atatatatct tgttttattg       960
     taaatgtagc ctttgacccc gctggcgctg ttgacaatcc ctgatacaac attcctccca      1020
     aatatatcgt aggtaaattc ttcgcatgct cagtatccca ccatgggatc ttcggacgat      1080
     atacaatatt atcggaccgt gtagtatctc ctgtattagc atacgtaaca gtcaaaatag      1140
     aaggaacact tctcaatatg gcacttcgcc atgatggata catcttcgcc ttatcaatag      1200
     acaggtaatc agaggccgaa gtacgggcag gaataaactt atgataagga aatagtatat      1260
     aatttccgag ggcactagac gaattatttc caacattctg atgcggatat attctagtaa      1320
     caactttaac aaatttcgca aattcaaaat tctgggcaac gtcgagatat tctggaaatc      1380
     cagcgagttg aatgtgcaac tcctgcaatg tgttcttcgt ggcgtcagct tgaaatgtct      1440
     gtagtctagt aagcttagtc atcatgcagc caaatttaga tctacgcctt ccataccggc      1500
     gacgacgcct aatacggcgt atactgcgaa ccggtctccg cctagcaaca cgacgtctga      1560
     accgcgccat agcaacagag caactaacgg aaaacctgac gcaaccggat tcggttccgc      1620
     tcaggagtgg ggggctacga ggttacagct acgaggtggc gggtaatact ataccgccac      1680
     ctcggtgttg ctatgccccg tgttgctaag taaagagcgc cgctgcgcgg cgctttttgg      1740
     aactactcta ccggggctgt gagtgcatgc agtaagctca gaggacccgg gctccccgct      1800
     tacggggcgg ggcgacac                                                    1818
//