ID   HQ738637; SV 1; circular; genomic DNA; STD; VRL; 1703 BP.
XX
AC   HQ738637;
XX
DT   31-JAN-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cyclovirus bat/USA/2009 isolate CyCV-TB, complete genome.
XX
KW   .
XX
OS   Cyclovirus bat/USA/2009
OC   Viruses; ssDNA viruses; Circoviridae; unclassified Circoviridae.
XX
RN   [1]
RP   1-1703
RX   DOI; 10.1099/vir.0.028704-0.
RX   PUBMED; 21177928.
RA   Li L., Shan T., Soji O.B., Alam M.M., Kunz T.H., Zaidi S.Z., Delwart E.;
RT   "Possible cross-species transmission of circoviruses and cycloviruses among
RT   farm animals";
RL   J. Gen. Virol. 92(Pt 4):768-772(2011).
XX
RN   [2]
RP   1-1703
RA   Li L., Delwart E.;
RT   ;
RL   Submitted (20-DEC-2010) to the INSDC.
RL   Blood Systems Research Institute, University of California, San Francisco,
RL   270 Masonic Ave, San Francisco, CA 94118, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1703
FT                   /organism="Cyclovirus bat/USA/2009"
FT                   /host="bat"
FT                   /isolate="CyCV-TB"
FT                   /mol_type="genomic DNA"
FT                   /country="USA"
FT                   /isolation_source="muscle"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:942035"
FT   CDS             1..837
FT                   /codon_start=1
FT                   /product="Rep protein"
FT                   /note="putative replication-associated protein"
FT                   /db_xref="GOA:E9NWS8"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:E9NWS8"
FT                   /protein_id="ADU76999.1"
FT                   /translation="MANATLRRFVFTWNNYNADDIEKVVKFIKEKCKYGIVGEEIAPTT
FT                   NTPHLQGFCNLKTPMRFKSIKTHLHTNIHIEKAKGTDLQNQEYCKKGNKWIEEGTPCTQ
FT                   GKRTDLETLVSAINSGTNTQQKIAKEFPICYIKYHRGINEYLKLIHPIEPRKEKTWVYY
FT                   YWGPPGTGKSRRALEEASQINSNSIYYKPRGLWWDGYHQQENVIIDDFYGWIKYDELLK
FT                   ITDRYPYKVQIKGGFEEFTSKRIWFTSNVDTDKLYHFIDYNNAAFERRITCKIHIT"
FT   CDS             complement(834..1511)
FT                   /codon_start=1
FT                   /product="Cap protein"
FT                   /note="putative capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:E9NWS9"
FT                   /protein_id="ADU77000.1"
FT                   /translation="MVRLRRFFRRFRRPLRAVRRMRRYFPNRRRKVRSRRGSMFCKLTK
FT                   VATITVENNINSVWDGSFVPDDFKEFTSLSKNFEFVRFLKVRITVVPLQNVANNSTSSV
FT                   PAFAMTPWHYAMDLPKNFQNYLSMDKSKMSRQTHVMSQTYVPNIGLLTSVLDHSGKVAE
FT                   DVDAIQWRPYVRTVNQNGNSLPRVRCGVVAFQGQSDMAGRTTTFNIKTDVFVRFTGQSI
FT                   MNI"
XX
SQ   Sequence 1703 BP; 603 A; 395 C; 311 G; 394 T; 0 other;
     atggcgaacg caaccctgcg cagatttgtt tttacgtgga ataactataa cgcggacgac        60
     atagaaaaag ttgttaagtt catcaaagaa aagtgcaaat atggaatagt tggtgaggaa       120
     attgcaccta caacaaatac accacacctg caggggttct gcaatctaaa aacacctatg       180
     cgattcaaaa gcatcaaaac tcatctacac acaaacatcc acatagaaaa agcaaaaggt       240
     actgatctac aaaatcaaga atactgcaaa aaaggaaaca aatggataga agaaggaaca       300
     ccatgcaccc aaggaaaacg cactgacttg gaaaccttag taagtgccat aaacagcgga       360
     acaaataccc aacaaaaaat agctaaggaa ttccctatat gctacatcaa ataccacaga       420
     ggaatcaacg aatatctcaa actaatacat cctattgaac cccgcaaaga aaaaacatgg       480
     gtctactact actggggacc accaggcacg ggaaaatcac gacgagctct ggaagaagca       540
     tcccaaatca acagcaatag tatatactac aaaccacgtg gactctggtg ggacggttat       600
     catcaacaag aaaatgtcat catagacgat ttctacggat ggataaagta cgacgaactc       660
     ctcaaaataa ctgaccgcta cccatataaa gtacaaatca aaggaggatt tgaggagttc       720
     acatcaaaac gcatttggtt tacaagcaac gtagacaccg ataaattata tcattttatt       780
     gattataata atgcagcgtt cgaaagacgc attacatgta aaattcacat tacttaaata       840
     ttcattattg attgccctgt aaaccgaaca aatacatcag tctttatatt aaatgtagtt       900
     gttcttccag ccatatctga ttgtccctga aacgctacta ctccgcagcg tacacgtggc       960
     aatgaattcc cattttgatt aaccgttcgc acataaggtc gccattgaat tgcatcaaca      1020
     tcctccgcaa ctttcccaga atgatccaaa acagacgtta atagtccaat atttggtaca      1080
     taggtctgac tcattacatg cgtttgacga gacatctttg acttatccat tgacaaatag      1140
     ttttgaaaat ttttaggcaa atccatagca taatgccacg gtgtcatggc aaaagcaggg      1200
     acagacgacg tagaattatt agcaacattt tgtaagggaa caactgtaat acgaacttta      1260
     aggaagcgaa caaattcaaa atttttcgac aaagacgtaa actccttaaa atcatcaggc      1320
     acaaaagagc catcccacac agaatttata ttattctcaa cagtaatcgt agccacctta      1380
     gtaagtttac aaaacattga acccctacgc gaacgaacct tcctccttcg gttaggaaag      1440
     taccgccgca tccgacgaac cgcccgcaac ggtcgtcgga aacgacgaaa aaaacgtctt      1500
     aatcttacca ttgctcaagg ccaactggat gcgcggacgt tgcaggggcg taggcctccg      1560
     ctaccgctcc ggccacaagg tgtgtgtggg ggggcattcc tgcacaaacc tgttttaccc      1620
     cctaaccagt ttactcagcc tccctgcaac gaagtcggat acgaagtggc gggtaatact      1680
     ataccgccac ttcgtttcat acc                                              1703
//