ID   HQ738636; SV 1; circular; genomic DNA; STD; VRL; 1751 BP.
XX
AC   HQ738636;
XX
DT   31-JAN-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cyclovirus PKgoat11/PAK/2009 isolate PKgoat11, complete genome.
XX
KW   .
XX
OS   Cyclovirus PKgoat11/PAK/2009
OC   Viruses; ssDNA viruses; Circoviridae; unclassified Circoviridae.
XX
RN   [1]
RP   1-1751
RX   DOI; 10.1099/vir.0.028704-0.
RX   PUBMED; 21177928.
RA   Li L., Shan T., Soji O.B., Alam M.M., Kunz T.H., Zaidi S.Z., Delwart E.;
RT   "Possible cross-species transmission of circoviruses and cycloviruses among
RT   farm animals";
RL   J. Gen. Virol. 92(Pt 4):768-772(2011).
XX
RN   [2]
RP   1-1751
RA   Li L., Delwart E.;
RT   ;
RL   Submitted (20-DEC-2010) to the INSDC.
RL   Blood Systems Research Institute, University of California, San Francisco,
RL   270 Masonic Ave, San Francisco, CA 94118, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1751
FT                   /organism="Cyclovirus PKgoat11/PAK/2009"
FT                   /host="goat"
FT                   /isolate="PKgoat11"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:942034"
FT   CDS             1..837
FT                   /codon_start=1
FT                   /product="Rep protein"
FT                   /note="putative replication-associated protein"
FT                   /db_xref="GOA:E9NWS6"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:E9NWS6"
FT                   /protein_id="ADU76997.1"
FT                   /translation="MANRTVRRFCFTWNNYDDSAYEKCEKFIEKFCKYGIVGEESAPTT
FT                   GTLHLQGFCNLHKPTRYSTIKKHLDNSIHIEKANGTDEQNQKYCSKSGIFFESGIPNKQ
FT                   GTRNDLKSVVESINKEGATLGNIATEHPEIYIRYFRGIQQLLQLVRPIRQRDFKTEVFY
FT                   YWGPPGSGKSRRALEEARQLDGESIYYKPRGLWWDGYEQQRSVIIDDFYGWIKYDEMLK
FT                   IMDRYPYKVQIKGGFQEFTSEKIFITSNVDVCDLYKFVGYETAAFDRRITLKEYMD"
FT   CDS             complement(834..1529)
FT                   /codon_start=1
FT                   /product="Cap protein"
FT                   /note="putative capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:E9NWS7"
FT                   /protein_id="ADU76998.1"
FT                   /translation="MARFRAVYRRRRVGRRRRFRRRRTYRKRRRLSKGSFMCKLTKVST
FT                   YEVPNNATSTYSCSFLPSDFPEYKSLAPNFEYCKFIKQRVRVIPMQNVSNANTTIIPSY
FT                   CILPWHKGGEAKKSFNQVISSDRAKIYRQTERGQMIFTCNTWTQSSPDDVTVRGMNTII
FT                   WKPTVPYDQTKFEPRIYSGLVVWQGEGNLEGRTSTFNVVEDVYCIFSNQTSLHVSPYPP
FT                   TQSVEAMKI"
XX
SQ   Sequence 1751 BP; 547 A; 391 C; 374 G; 439 T; 0 other;
     atggcaaacc gtacagtaag gcgtttctgt tttacgtgga acaactacga cgactctgcg        60
     tacgaaaagt gcgaaaagtt tatcgaaaaa ttttgcaaat atggaatcgt gggagaagaa       120
     tcagctccaa ccactgggac gcttcacttg caagggttct gtaatctaca taagccaaca       180
     cgctacagta ccatcaagaa gcatctcgat aacagcatcc atattgagaa ggcaaatggg       240
     acagacgaac aaaaccaaaa atactgttcg aaatcaggca tattttttga atcgggtatt       300
     ccaaacaaac aagggacacg gaatgatctt aaatctgtgg tggaatcaat caacaaagaa       360
     ggtgctacgc tgggaaatat tgccaccgaa caccctgaaa tatacatacg ctatttccgt       420
     ggcatccaac aactgctgca actggtacgc ccaatacgtc aacgcgattt caagactgag       480
     gttttttatt actgggggcc gccaggatct gggaaatcta gaagagcgct tgaggaagcg       540
     aggcaacttg acggagaatc catatactac aaaccccgag gattatggtg ggatggctat       600
     gaacaacagc gcagcgttat aatagacgac ttctatggat ggataaagta cgacgaaatg       660
     ctgaaaataa tggaccgcta cccatacaag gtacaaataa aaggaggatt tcaagaattc       720
     acatcagaaa aaatttttat tacttcaaat gtcgacgttt gtgacttata caaattcgta       780
     ggttacgaaa ctgccgcctt tgacagacgc attacattaa aagaatacat ggattaaatt       840
     ttcatagcct ctacactctg ggtaggagga tacggagaca catgtaaaga tgtttgattt       900
     gaaaaaatac aataaacgtc ctctacaaca ttaaatgtcg atgttcttcc ttccaaatta       960
     ccctctccct gccaaacaac caaaccagaa tatatcctag gctcaaattt cgtttgatca      1020
     tacggcacag tcggtttcca tattatagta ttcattcctc gcacagtgac gtcatcagga      1080
     ctgctctgag tccacgtatt acatgtaaat atcatttgac cacgttccgt ctgcctatat      1140
     atcttagcac gatcactact aataacttga ttaaaagact tcttagcctc accacctttg      1200
     tgccacggca atatacaata tgacggaata attgtagtat tagcattact aacattttgc      1260
     ataggaatta cacgaactcg ttgtttgata aatttgcagt attcaaaatt cggggcaagc      1320
     gatttatatt caggaaaatc agaaggaaga aagctacacg agtaagtaga agttgcatta      1380
     ttcggaactt catatgtaga cactttagta agtttacaca taaaggagcc cttagaaaga      1440
     cgcctacgtt tccgataagt tcttcgacga cgaaatctcc gacgacgccc cacgcgccta      1500
     cgcctatata cggccctgaa tcgcgccatg cctttcactt ttacgctcgg ttaaaaataa      1560
     ctcctcttca ggcggcagac tgttgccaag tgaacgttgc gccccccccc tcggccgggg      1620
     agcctgcccg gccggccccc ggcgggggga gggcgtgcgt gttgaaacct gtttgggcgg      1680
     atgtagcggc ggttacgaag tgacggttac gaagtgacgg ggtaatacta tgcccgtcac      1740
     ttcgttgcag a                                                           1751
//