ID HQ262536; SV 1; circular; genomic DNA; STD; VRL; 7784 BP. XX AC HQ262536; XX DT 20-SEP-2011 (Rel. 110, Created) DT 20-SEP-2011 (Rel. 110, Last updated, Version 1) XX DE Canine papillomavirus 8 isolate Charlotte, complete genome. XX KW . XX OS Canine papillomavirus 8 OC Viruses; dsDNA viruses, no RNA stage; Papillomaviridae; OC unclassified Papillomaviridae. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-7784 RX PUBMED; 21883544. RA Lange C.E., Tobler K., Lehner A., Vetsch E., Favrot C.; RT "A case of a canine pigmented plaque associated with the presence of a RT Chi-papillomavirus"; RL Vet. Dermatol. 0:0-0(2011). XX RN [2] RP 1-7784 RA Lange C.E., Tobler K., Lehner A., Vetsch E., Favrot C.; RT ; RL Submitted (16-SEP-2010) to the INSDC. RL Clinic for Small Animal Internal Medicine, University of Zurich, Vetsuisse RL Faculty, Winterthurerstrasse 260, Zurich 8057, Switzerland XX FH Key Location/Qualifiers FH FT source 1..7784 FT /organism="Canine papillomavirus 8" FT /host="canis lupus familiaris" FT /isolate="Charlotte" FT /mol_type="genomic DNA" FT /country="Switzerland" FT /db_xref="taxon:1081055" FT CDS 1..435 FT /codon_start=1 FT /product="E6" FT /note="putative E6 ORF" FT /db_xref="GOA:G3DRD7" FT /db_xref="InterPro:IPR001334" FT /db_xref="UniProtKB/TrEMBL:G3DRD7" FT /protein_id="AEO16195.1" FT /translation="MWESSGVAMEHLQGAASLAAHIKVPIEDLLLPCVFCGRFLDFHEL FT TAFDYKQLQLTWKGGFPRGCCIPCAKTVSEQECMLFTEVVLTSEEFANQVGGFASIFVR FT CRLCLKLLSLTEKVNAILHGEQFLRVRGRWRARCRCCINI" FT CDS 438..752 FT /codon_start=1 FT /product="E7" FT /note="putative E7 ORF" FT /db_xref="GOA:G3DRD8" FT /db_xref="InterPro:IPR000148" FT /db_xref="UniProtKB/TrEMBL:G3DRD8" FT /protein_id="AEO16196.1" FT /translation="MIGKDATLRDIVLEEEQPCPVDDLYCDEELPPEEEEEAERELQSF FT APYRIQAHCGHCERPIRLVVLSTRDGIISLEELLTSCLDLCCPDCASRRWRFGRAQHGG FT " FT CDS 742..2619 FT /codon_start=1 FT /product="E1" FT /note="putative E1 ORF" FT /db_xref="GOA:G3DRD9" FT /db_xref="InterPro:IPR001177" FT /db_xref="InterPro:IPR014000" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR016393" FT /db_xref="UniProtKB/TrEMBL:G3DRD9" FT /protein_id="AEO16192.1" FT /translation="MEGELEAGTDPQEGCSGHFIVQEAECSDMGSDEESDTEGDIPGLI FT SDTPVEQGNTRALFQQQALTDDSREAQLLKRKLMSPKQKVADLSPRLRSITITPPKPSA FT KRRLFESSFDSGIENSGNHETEATNTDETQVDAVMFDNGDGRSEGRGEGDGEEYGPKEG FT GSGSIVKQLMKTSNRRAALLGKFKESFGLGLGELTRAFKSHKTCNADWVVYICGVHHSV FT YESMPEILRPICDYMVITGNSGRGGYLVLMLLRFKAQKCRDTLLKMLKDKFNVNDLQVV FT ADPPKVKSVPAALYWFRMALSKTASVGGDTPEWITRQTLVNHQTGDAAKFDLAHMVQWA FT FDNNYTEESIIAYNYALIADEDINAAAWLNTNSQAKHVKDCCTMVRLYKTAIMRSLSIS FT GWIHTRMKEFDDSGDWRDIVNFLRFQHVEFIAFLGAFKALLKGIPKRNCICIHGPPNTG FT KSMFCMSLLGFFGGRVISFANSKSQFWMQPLADARLALLDDATRATWDYFDMYLRNALD FT GNPISVDLKHRAPTQIKCPPLLITTNLNITHDDRWRYLFTRVKLFEFKYDFPFNEEGQP FT LYKLNHESWKSFFKRLWLQLDLSDQEDEGEDGEPEQTFKCGPRRSSQSL" FT CDS 2561..4144 FT /codon_start=1 FT /product="E2" FT /note="putative E2 ORF" FT /db_xref="GOA:G3DRE0" FT /db_xref="InterPro:IPR000427" FT /db_xref="InterPro:IPR001866" FT /db_xref="InterPro:IPR012677" FT /db_xref="UniProtKB/TrEMBL:G3DRE0" FT /protein_id="AEO16193.1" FT /translation="MESLSKRLNAVQDDLLNLYEEGSDQLQRQVEHWNLTRQENVLLHY FT ARQSGVMRVGMQPVPPLQVSAERAKSAIEMQLMLQSLCDSPWATETWTLSDTCRERWLA FT DPPRCWKKGPCTVEVVYDGDADNSMHYTLWQRIYYQDSSDRWQMSKSQVDHSGIWFWDC FT EHKHYYVKFATDAERYSATGVWEVVYNNETISSCDPVTSTTPPTDPCGEAELYPHRIPT FT TQRRAGDGGEEPSKGEAPAAQGETELPAIHTPTHTSPFPDSTSNSPEPVSQSAGGVQRP FT SVEPVGTSPQSTPPCTGSQQGPNAPETPRKPKKRQPTSATAGPGSKRKPADSQSAKGGA FT QEPSDEPLLVPVYGERGGGGDGPVGCEGGGQQHARALAVPSADPGPLGPPSPSRGSASP FT SPPPPPAAAARRPPPRAPAARQGRVPVEGGHRDGPEHLFREAGDSPASALVLCGPANTL FT KCFRYRLCHNHSHRYSHCSTTWYWTGQGAGRLGPARIIVTFRDRHQKSDFLAAVRLPPS FT VTAARSLLAI" FT CDS 3084..3908 FT /codon_start=1 FT /product="E4" FT /note="putative E4 ORF" FT /db_xref="UniProtKB/TrEMBL:G3DRE1" FT /protein_id="AEO16194.1" FT /translation="MQRDIVLREYGRLCITMRPFHLAILLLALHRPPTLVERLNYILTG FT YPPPNDEPETGERSPARGRRRRRKERLSSPQFTPPHTPPRSPTALLTPPSPFPSLLGGF FT SDPPSSQWELPPSQRRLAQGRSRGPTPPKHPESQRSDSPHPPQQGPGPSASQRIVSLPR FT GVPRSPRTNPFWFPFTESVEEEGTGLSVVRGGGNNTPGPLRSRPQTPDHWDPLPRPEEV FT PRRRRRPRLQQQHEDLRLALQQLGRDAFQLREDIETDLNTFFGKLGIAPHRL" FT CDS 4308..5837 FT /codon_start=1 FT /product="L2" FT /note="putative L2 ORF" FT /db_xref="GOA:G3DRE2" FT /db_xref="InterPro:IPR000784" FT /db_xref="UniProtKB/TrEMBL:G3DRE2" FT /protein_id="AEO16198.1" FT /translation="MVRARRTRRAAAEDLYKTCKAAGTCPPDIIPKIERKTVADKILQW FT GAAGTFFGGLGIGTGSGRGGATGYIPLGGGGRGPGVNIGAGGRTVRPPIPVDALGPAEV FT LPVDALDPAVVPLVDGSATDVSVIESGVDLVPRPAPEAPTDVVPVDVSTEVTADGFTNV FT SLHVPPEATPPSRSSVSWSQFSNPAFEVAPDSTHGFGETSSSHNIFVTEGGDGVPVGEG FT SEDIPLVEFRTSTPKQRPARPRTRGRGYPQRFYEKVKVSDPAFLSRPGTLVQFGFDNPV FT FDETLEFTVPAEPEAAPDPDFTDIRRLTSSRFTEVDGRVRVSRFGARAGVRTRSGLQIG FT SQVHFYHDISDIHPVEEVELSILGETSNADPITISDDTQPLDVAMDEDAFESISLDSLT FT SADLDSRATSSWEVLENEDVPLIQGRLSFGHGRNRQTIEVVVRPATAGGPVDYDDEGVY FT IDYQDDYTPQRPVRPTPLPPTVVVGSFGGVDYSLHPSLLRKRRRRRKRYIS" FT CDS 5849..7342 FT /codon_start=1 FT /product="L1" FT /note="putative L1 ORF" FT /db_xref="GOA:G3DRE3" FT /db_xref="InterPro:IPR002210" FT /db_xref="InterPro:IPR011222" FT /db_xref="UniProtKB/TrEMBL:G3DRE3" FT /protein_id="AEO16197.1" FT /translation="MSLWTPNSQKIFLPPNPVTKVLSTDTYVRRTNVYCHANSDRLLLV FT GHPLFEIKNEETVKVPKCSSNQWRVFRIKLPDPNRFAFGDTTIHNPETERLVWGVKGID FT VGRGQPLGLGVTGHPLFNKLADNENPNKYDAAQTKDNRLNVAFDVKQTQMIILGCAPAV FT GEHWRKARVCPNTATKKGDCPPIELQNTVIQDGDMFDIGFGAMEFSTLQENKSDAPLDI FT NTTTCKYPDFLKMAKETTGDSMFFFARREQSYARHFLSRGGTPGEPVPDGLVLKPESQP FT SMGTSVYFGTQSGSLVSSDAQVFNRPYWLLRSQGLNNGICWRDQLFVTVADNTRGTNMT FT ISMSNDQSPQTTYDSTKFNTYTRHVEEFELALILQLCIVPLSSDVLSHLQSMNPSILEG FT WNLGVNPPTSSLLEDAYRFIDSDATRCPRANPPKEPEDPYGAYKFWDVDLTERLSMDLD FT QFPLGRKFIAQNQGGGSNRKRSLPPSRGTVKKRRKTSAK" XX SQ Sequence 7784 BP; 1944 A; 1877 C; 2111 G; 1852 T; 0 other; atgtgggaaa gcagtggggt tgccatggag catttgcaag gggctgcttc attggctgct 60 catatcaagg tgccaatcga ggatttgctt ttgccatgtg tgttttgcgg gcgtttccta 120 gattttcatg aattgacagc ttttgactat aagcagttgc agcttacatg gaaaggcgga 180 tttccacgcg gatgctgcat tccatgtgca aagacggtgt ctgagcagga gtgtatgctc 240 tttacagagg tagtattaac aagcgaagag ttcgctaacc aggttggggg ctttgcttct 300 atatttgtaa ggtgtagact ctgcttaaaa ttgctttccc taacagaaaa agtaaacgct 360 atattgcatg gtgagcagtt tttacgggtc agagggaggt ggcgggcacg ttgtcgctgc 420 tgtataaata tctgataatg attgggaaag acgctactct tagagacatt gtgcttgagg 480 aggagcagcc ttgccctgtc gacgacttat attgcgacga ggagcttcct ccagaggaag 540 aggaggaggc ggagcgagag ctacagagct ttgctcccta cagaatacag gctcattgcg 600 ggcactgcga acgacctatt agacttgtgg tcctgtccac cagggacggt ataatcagcc 660 ttgaagaact actgacgagc tgccttgatt tgtgctgccc cgattgtgcg tcacgtcggt 720 ggagattcgg cagagcgcaa catggagggt gaactagaag caggtacaga cccgcaggaa 780 ggttgtagtg gtcatttcat tgtgcaggag gccgagtgta gcgatatggg cagtgatgag 840 gaaagcgata cagaaggtga tattcctggg ctaatatcag atacaccagt tgagcaggga 900 aatacccggg cactgtttca acagcaggca cttacagatg acagtagaga ggctcaactg 960 ttaaaaagaa aactgatgag tccgaaacag aaagtagccg acttaagccc caggcttagg 1020 tctatcacaa taacaccacc aaagccttca gctaagagga ggttatttga gtcgagcttc 1080 gacagcggga tagaaaactc agggaaccat gaaactgaag ctactaacac ggatgagaca 1140 caggtagatg ccgtgatgtt tgacaatggc gacggtcgta gtgaagggag gggggaggga 1200 gacggagagg aatacgggcc gaaagaaggg gggtccggga gcatagtgaa gcaattaatg 1260 aaaacatcaa acagacgagc agcgctgctg ggcaaattta aggaaagctt tgggcttggg 1320 cttggagagc ttacccgcgc ctttaagagc cacaaaacat gcaatgcaga ctgggttgtg 1380 tatatttgtg gcgtgcacca ttcggtatat gaaagcatgc cagaaatact cagaccaatc 1440 tgtgattaca tggttatcac tgggaacagc ggaagggggg gctaccttgt gctaatgcta 1500 ttgagattca aagcacagaa gtgcagagac acgctcctaa aaatgctgaa ggataaattc 1560 aatgtaaatg atctgcaagt agtggcggat cctccaaagg tgaagagcgt tccagctgca 1620 ttgtactggt ttaggatggc actctcaaaa acagcaagtg tagggggtga tacacctgag 1680 tggatcacca ggcaaacact tgtaaatcat caaacaggag acgcagccaa atttgacctt 1740 gcacatatgg tgcagtgggc atttgataac aattatacag aggaaagtat catagcatac 1800 aattatgctc tgattgcaga tgaagacatc aatgcagctg cctggctcaa tacaaattcg 1860 caggcaaaac atgtgaagga ctgttgtacg atggtcaggc tttataagac agccattatg 1920 aggagcctgt ctatatcagg gtggatacac acaagaatga aggagttcga cgacagcggg 1980 gactggaggg acatagttaa ttttctgaga tttcagcatg ttgagtttat tgcatttttg 2040 ggggccttta aagctctcct gaaggggata cccaaaagaa attgtatctg catacacggg 2100 cccccgaaca cggggaaatc tatgttctgc atgagcttgc ttggcttttt tggtggcagg 2160 gtcatttctt ttgcaaattc caaaagccaa ttttggatgc agccattagc tgacgcgcgc 2220 ctggcattgc ttgacgatgc caccagagcg acgtgggact attttgacat gtatctcaga 2280 aatgcattag atggcaatcc tatctctgta gatctaaagc acagggcacc cacgcaaata 2340 aaatgtccac cgttgctaat aacaaccaat ttaaacatta cacatgacga caggtggcgc 2400 tacctgttta caagagtaaa gctttttgag tttaagtatg actttccctt taacgaggaa 2460 ggacagcccc tatacaagct taatcatgag agttggaaat ctttttttaa aaggttgtgg 2520 ttacaattag acctaagtga tcaagaggac gagggggaag atggagagcc tgagcaaacg 2580 tttaaatgcg gtccaagacg atcttctcaa tctttatgaa gagggcagtg accagttgca 2640 gcgtcaggtt gagcactgga atctaacgcg gcaggaaaac gtgctgctac attatgccag 2700 gcaatccggg gtgatgcggg tgggcatgca acccgtgcca ccgctgcagg tatcggccga 2760 gcgggccaaa agcgcaattg agatgcagct tatgctgcag tcgctgtgtg actctccgtg 2820 ggcgacggag acatggacac tcagcgacac gtgtagagag cgttggctgg cggatccgcc 2880 gcggtgctgg aaaaaggggc cttgcactgt tgaggttgtt tatgatgggg acgcggacaa 2940 tagcatgcac tacacgcttt ggcagcggat atattatcag gattcttcgg acaggtggca 3000 aatgtctaaa agtcaggttg accacagtgg gatatggttt tgggactgtg agcataaaca 3060 ttactatgtg aagtttgcca cggatgcaga gagatatagt gctacgggag tatgggaggt 3120 tgtgtataac aatgagacca tttcatcttg cgatcctgtt actagcacta caccgcccac 3180 cgacccttgt ggagaggctg aattatatcc tcaccggata cccaccaccc aacgacgagc 3240 cggagacggg ggagaggagc ccagcaaggg ggaggcgccg gcggcgcaag gagagactga 3300 gctccccgca attcacaccc ccacacacac ctccccgttc cccgacagca cttctaactc 3360 ccccgagccc gtttcccagt ctgctggggg ggttcagcga ccctccgtcg agccagtggg 3420 aacttccccc cagtcaacgc cgccttgcac agggtcgcag caggggccca acgcccccga 3480 aacacccaga aagccaaaga agcgacagcc cacatccgcc acagcagggc ccgggtccaa 3540 gcgcaagcca gcggatagtc agtctgccaa ggggggtgcc caggagccct cggacgaacc 3600 ccttctggtt cccgtttacg gagagcgtgg aggaggaggg gacgggcctg tcggttgtga 3660 gggggggggg caacaacacg ccagggccct tgcggtcccg tccgcagacc ccggaccatt 3720 gggaccccct tccccgtcca gaggaagtgc ctcgccgtcg ccgccgcccc cgcctgcagc 3780 agcagcacga agacctccgc ctcgcgctcc agcagctcgg cagggacgcg ttccagttga 3840 gggaggacat cgagacggac ctgaacacct ttttcgggaa gctggggata gccccgcatc 3900 ggctctagtt ctctgtggac ccgctaacac tctgaagtgt ttcaggtaca gactctgtca 3960 taatcacagc caccgctatt cacactgcag cactacctgg tactggacag gtcagggtgc 4020 agggagactt ggacctgcaa ggatcatagt gacttttcgg gacaggcatc aaaaaagtga 4080 ctttttggcc gcggtcaggc tccccccctc cgtgacggca gcccgctccc ttttggccat 4140 ttaggtgtcc atgtatttct gtgtcctcat ttcatgattt ttctacacgg tcttgctttt 4200 ttttactttg tctgttacta cattttgttt cacttatttt ttgtactgtg catttggctg 4260 gtcataaagg cattgctttc ttgtaccact ctgttgtgtt gggtctaatg gtaagggcca 4320 gaaggacgcg gcgggcggcc gcagaggacc tgtacaaaac atgcaaggcc gcaggtacgt 4380 gcccacctga cattattcca aagatagaga ggaaaacagt tgcggacaaa atattgcagt 4440 ggggggcggc tgggaccttt ttcggtggcc ttggtatagg gaccggatcc ggtaggggag 4500 gagctactgg atatatccct ctcggtggtg gggggcgtgg ccctggagtc aacataggag 4560 cgggggggag gacagtgcgt ccaccgatac cggtcgacgc cctgggtcct gcagaggtct 4620 tacctgtgga cgcccttgat cctgctgttg ttccactggt cgacgggtca gcaacggatg 4680 tcagcgtcat agaaagtggt gtggaccttg tccctcgccc tgctccagag gcgcccacgg 4740 acgttgtgcc cgtggatgtg tccactgagg tcactgctga tggctttaca aatgtgtcgc 4800 tacatgtccc acctgaagca acacctcctt cacggtccag tgtgtcgtgg tctcagttta 4860 gcaaccctgc attcgaggtt gcccctgaca gcacacacgg ttttggggag acatcctctt 4920 cacataacat atttgtcaca gagggggggg acggggtgcc tgtaggcgaa ggctctgagg 4980 acataccact tgtggaattc agaaccagca cccctaaaca aaggcctgca cgtccccgca 5040 cacggggccg agggtatcct caaaggtttt atgagaaggt gaaagtctcg gaccctgctt 5100 ttcttagcag gccaggcaca ctcgtgcagt ttggctttga caaccctgtg tttgatgaaa 5160 cactcgagtt tactgtccct gctgagcccg aagcggcccc tgaccctgac tttactgata 5220 ttaggcgcct gacatcatcc agatttacag aggtggatgg ccgtgttagg gttagccgtt 5280 ttggggcccg tgccggggtc cgcacccgta gcggccttca gattgggtct caggtacact 5340 tttaccatga cataagtgac atacatcccg tggaagaggt ggagctatcc atactaggtg 5400 aaacctccaa cgcagacccc ataaccatat cggatgacac acagcccctt gatgtcgcca 5460 tggatgagga tgcctttgag tctattagtc tggacagtct gaccagtgca gatttggact 5520 cacgtgccac atcatcatgg gaggttttag aaaatgagga tgtcccactt atacagggca 5580 gactatcctt tggtcacgga cgcaaccggc aaaccattga ggttgttgtc cggcctgcaa 5640 ccgctggtgg ccccgttgat tatgatgatg agggtgttta cattgactac caggatgact 5700 acactcctca gagacctgtc agacccacgc cacttccgcc caccgtggtg gtgggctctt 5760 tcgggggtgt ggattatagt ctgcacccca gcctactcag gaaacgtcgc cgcagacgca 5820 aacggtacat ttcttgattc tgttgcagat gtcactgtgg acccctaaca gccagaagat 5880 cttcctgcct cccaaccctg taactaaagt tttaagcact gacacctatg ttaggcgcac 5940 caatgtttac tgtcatgcta actctgaccg cctgcttctt gtgggtcacc ccttatttga 6000 gattaaaaat gaggaaacag ttaaggtccc taaatgttcc agtaaccagt ggagggtctt 6060 tcgcatcaag cttcctgacc ccaataggtt tgcttttggg gacaccacta ttcataaccc 6120 tgaaactgaa aggttagtgt ggggtgtgaa aggtatagat gttggtaggg gacagccatt 6180 aggcctcggg gttacaggtc accctctgtt taacaagtta gcagacaatg aaaatcctaa 6240 taaatatgat gctgcacaga caaaggacaa cagacttaat gttgcttttg atgtgaagca 6300 gactcaaatg attattctgg gctgtgcccc tgctgttggg gagcactggc ggaaggcacg 6360 tgtctgtcct aatacagcta caaagaaagg agactgccca cccatagaac tgcaaaacac 6420 agtgatacaa gatggtgata tgtttgacat tggctttggt gccatggagt tttccacctt 6480 gcaggaaaac aagtcagatg caccactgga cattaacaca actacctgta aataccctga 6540 ttttcttaaa atggctaagg aaacaacagg ggattctatg tttttctttg ctaggcgtga 6600 gcaatcttat gcccgccatt ttcttagccg tgggggtacc cctggtgagc ctgttcccga 6660 tggtctggtt ctaaaaccag agagtcagcc atcaatggga acttctgtat actttggtac 6720 acagagtgga tccctggttt ccagtgatgc acaagttttc aacaggcctt actggctgct 6780 gcgttcgcag ggccttaaca atggtatatg ctggagggac cagctctttg ttacagtggc 6840 tgacaatacc aggggcacca acatgacaat ttcaatgagc aatgaccagt ctcctcaaac 6900 tacatatgac tctacaaagt tcaacaccta cacaaggcat gtggaagagt ttgagcttgc 6960 tttgatcctg cagctctgta ttgtccccct gtcgtctgat gtcctcagcc acctacagtc 7020 aatgaacccc tctattttgg agggctggaa ccttggagtt aaccctccca catcgtcgct 7080 gctggaggat gcctaccgct tcatcgactc tgatgctacc cgctgtccta gggccaaccc 7140 tccaaaggaa cctgaggacc cctatggtgc atacaagttt tgggatgtgg accttacgga 7200 gcgcctatcg atggaccttg accaattccc tcttggaaga aaattcatag cacagaacca 7260 aggcggtggt tccaaccgaa aacgttcgct ccccccctcc cgcggcactg tgaaaaaaag 7320 gaggaagaca tctgccaaat aaatttgatc ttttgcccgc gatgtccttg gcacagaggt 7380 tgtttttgag tgaaatactc attgaacatt ctaatcccca accgcgcccg gttgcaccca 7440 gtgagtaaga cccgcacctg catcggtctg gcgcggatat accaaacacc gcccctactg 7500 attggcttta aagtctgcag cgtctgccaa tactgtcata tttattggcg ggagcgtgca 7560 agcatcctgc caagtaccgg gagcggtcgc tgtttgggtt catgtcctta cgtatactgc 7620 tgactctgca tcttacataa gcgggagcgg tgttcctgac cggcggcggt gcaggtactg 7680 gcatattatg attgttgcta actacaacaa tctttatatg cttttttttt tccagagcac 7740 cgaaagcggt tgaggttttg cgccaaaaag ctgctataaa atag 7784 //