ID   GQ404857; SV 1; circular; genomic DNA; STD; VRL; 1867 BP.
XX
AC   GQ404857;
XX
DT   15-MAR-2010 (Rel. 104, Created)
DT   15-MAR-2010 (Rel. 104, Last updated, Version 1)
XX
DE   Cyclovirus TN25, complete genome.
XX
KW   .
XX
OS   Cyclovirus TN25
OC   Viruses; ssDNA viruses; Circoviridae; unclassified Circoviridae.
XX
RN   [1]
RP   1-1867
RX   DOI; 10.1128/JVI.02109-09.
RX   PUBMED; 20007276.
RA   Li L., Kapoor A., Slikas B., Bamidele O.S., Wang C., Shaukat S.,
RA   Masroor M.A., Wilson M.L., Ndjango J.B., Peeters M., Gross-Camp N.D.,
RA   Muller M.N., Hahn B.H., Wolfe N.D., Triki H., Bartkus J., Zaidi S.Z.,
RA   Delwart E.;
RT   "Multiple diverse circoviruses infect farm animals and are commonly found
RT   in human and chimpanzee feces";
RL   J. Virol. 84(4):1674-1682(2010).
XX
RN   [2]
RP   1-1867
RA   Li L., Kapoor A., Delwart E.;
RT   ;
RL   Submitted (23-JUL-2009) to the INSDC.
RL   Department of Laboratory Medicine, University of California, San Francisco,
RL   Blood Systems Research Institute, 270 Masonic Ave, San Francisco, CA 94118,
RL   USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1867
FT                   /organism="Cyclovirus TN25"
FT                   /host="Homo sapiens"
FT                   /isolate="TN25"
FT                   /mol_type="genomic DNA"
FT                   /country="Tunisia"
FT                   /isolation_source="stool"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:742924"
FT   gene            55..1086
FT                   /gene="rep"
FT   CDS             join(55..236,408..1086)
FT                   /codon_start=1
FT                   /gene="rep"
FT                   /product="replication-association protein"
FT                   /db_xref="GOA:D4N3R2"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D4N3R2"
FT                   /protein_id="ADD62477.1"
FT                   /translation="MAVSSRKQTNSTLRRFCWTLNNYTEEDVTTLQKDLAELCKFAIFG
FT                   RETCPNTGTKHLQGFCNLQRPKRFSSIRKLFKERAHIEKAKGSDFDNKAYCSKSGEVWM
FT                   HGEPSSQGARNDLQEVVSVIEGGERNIKAVALQFPTTYIKYFKGIEQYIRICHSSAERD
FT                   FATQVSFFWGPTGSGKSRRAYEEAKATGEPIYYKPRGEWWDGYCGHANVIIDDFYGWLK
FT                   YDELLKICDRYPYRVPVKGGYENFVTKRIWITSEKPLEQIYRFIGYDCSSIRRRLNTEL
FT                   YIGYE"
FT   gene            complement(1093..1761)
FT                   /gene="cap"
FT   CDS             complement(1093..1761)
FT                   /codon_start=1
FT                   /gene="cap"
FT                   /product="capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:D4N3R3"
FT                   /protein_id="ADD62478.1"
FT                   /translation="MAFRRRVVRSRAPIRRKLPRRRVARRRRFRRSRRLRGNFTVLAKR
FT                   TQVVVIQGDEGGTVTIAPSLNDFTELAPLVPNFEGFRIWSVSCKIRPLFNVASDVGPVP
FT                   RYYVAPWHKPTPTTVDSNGVLSIDRSKSYNGTSGAFRRFVPALLSAVGYSGIAGNQYGK
FT                   IEWRPRVELNSNTQSLQHYCGVVHWSKDQLPGAGAPSRRQYEIELVAKITLYNQKYFIG
FT                   "
XX
SQ   Sequence 1867 BP; 568 A; 417 C; 427 G; 455 T; 0 other;
     ataccgccac ttcgtgttat ataaagccat gcgttacaag ctaagcttca gacaatggct        60
     gtatcaagtc gcaaacagac gaactctacg ctgcgtcgct tctgttggac actcaacaac       120
     tacaccgagg aagatgtcac tactcttcag aaggatctcg ctgagctatg taaatttgct       180
     atatttggta gagagacatg tcctaacact ggaacaaaac atctgcaggg attttggtaa       240
     atatactcta ctcgtgcaat tcgagagaaa ctactgcttg gtgttgaccg cccgatcccg       300
     ctacgaggtg gaccaccccc tggcgcgctt cgcgcgccgg ggccccgtcc acctctgcgc       360
     gggacgggct ccgtgtgttg tgatagtaat gtgtattgtt ttttcagcaa tctgcagcga       420
     cccaagcgat tcagtagcat acgaaaacta tttaaagagc gagcgcacat tgaaaaagct       480
     aaaggaagtg atttcgataa taaggcatac tgttctaaat ctggcgaggt atggatgcac       540
     ggagaaccta gttctcaagg agctagaaac gatctccaag aggttgtttc tgtcattgaa       600
     ggaggagaga gaaacattaa agcagtggcc cttcagttcc ccacaacgta catcaagtat       660
     tttaaaggaa ttgaacaata cattagaatc tgtcattcaa gtgcagaacg agattttgct       720
     acccaagtct cgttcttctg gggacctacc ggatctggga aatctagacg agcctacgaa       780
     gaagcgaaag cgacaggaga gccaatctac tacaagccta gaggagaatg gtgggatgga       840
     tactgtggac acgctaatgt catcatcgac gacttctacg gatggcttaa atacgacgaa       900
     ttattaaaaa tttgcgaccg atatccgtat agagtaccag taaagggggg atatgaaaat       960
     tttgttacaa aacgtatatg gataacaagc gaaaaaccgt tggaacaaat ataccgattt      1020
     ataggttatg attgtagtag tataagaagg agactaaaca cagaattgta tattggatat      1080
     gaataaaatt tattaaccaa taaaatattt ttgattgtat aaagttattt tagctacaag      1140
     ttctatctca tattgtctcc tagacggcgc acccgcaccg gggagttgat ctttcgacca      1200
     gtgcacaact ccgcaataat gttgtaaact ttgcgtattc gaattaagtt ccacgcgcgg      1260
     cctccactca attttgccat attgatttcc cgcaatccca gaatagccaa cagcagaaag      1320
     aagagcagga acaaaccgcc ggaaggcccc agatgtgcca ttatacgatt tactcctatc      1380
     aatagataat acaccgttgc tatccacagt agttggagta ggcttatgcc atggtgccac      1440
     gtaataacga ggaacaggac caacgtcaga ggccacgtta aaaagcggtc taattttaca      1500
     tgacacactc caaatacgga atccctcaaa gtttggaaca agcggcgcca actcagtaaa      1560
     atcattcaaa gaaggagcaa tagttacagt tccaccttcg tctccttgaa taactacaac      1620
     ctgagtacgt ttagcaagca ccgtaaaatt tcctcttagt cgacgtgacc ttcggaagcg      1680
     gcgccgccta gcaacacgac ggcgcggcaa ctttcgcctt atcggagcgc gtgaccgtac      1740
     cactcgacgt ctgaaggcca tctctgacgt cacgcgataa accggttata tcatgttgct      1800
     atggaaggag aggggagcca atcagcgggc gatacgatgt tacggttacg aagtggcggg      1860
     taatact                                                                1867
//