ID   GQ404855; SV 1; circular; genomic DNA; STD; VRL; 1795 BP.
XX
AC   GQ404855;
XX
DT   15-MAR-2010 (Rel. 104, Created)
DT   15-MAR-2010 (Rel. 104, Last updated, Version 1)
XX
DE   Cyclovirus NG14, complete genome.
XX
KW   .
XX
OS   Cyclovirus NG14
OC   Viruses; ssDNA viruses; Circoviridae; unclassified Circoviridae.
XX
RN   [1]
RP   1-1795
RX   DOI; 10.1128/JVI.02109-09.
RX   PUBMED; 20007276.
RA   Li L., Kapoor A., Slikas B., Bamidele O.S., Wang C., Shaukat S.,
RA   Masroor M.A., Wilson M.L., Ndjango J.B., Peeters M., Gross-Camp N.D.,
RA   Muller M.N., Hahn B.H., Wolfe N.D., Triki H., Bartkus J., Zaidi S.Z.,
RA   Delwart E.;
RT   "Multiple diverse circoviruses infect farm animals and are commonly found
RT   in human and chimpanzee feces";
RL   J. Virol. 84(4):1674-1682(2010).
XX
RN   [2]
RP   1-1795
RA   Li L., Kapoor A., Delwart E.;
RT   ;
RL   Submitted (23-JUL-2009) to the INSDC.
RL   Department of Laboratory Medicine, University of California, San Francisco,
RL   Blood Systems Research Institute, 270 Masonic Ave, San Francisco, CA 94118,
RL   USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1795
FT                   /organism="Cyclovirus NG14"
FT                   /host="Homo sapiens"
FT                   /isolate="NG14"
FT                   /mol_type="genomic DNA"
FT                   /country="Nigeria"
FT                   /isolation_source="stool"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:742923"
FT   gene            157..1017
FT                   /gene="rep"
FT   CDS             157..1017
FT                   /codon_start=1
FT                   /gene="rep"
FT                   /product="replication-association protein"
FT                   /db_xref="GOA:D4N3Q8"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D4N3Q8"
FT                   /protein_id="ADD62473.1"
FT                   /translation="MALADVRGMANSTVRRFCFTWNNYSELEYVLCCEFIKKYCCYGIV
FT                   GKEIAPNTGTHHLQGFCNLEKPMRFSTIKKRLDSRIHIEKAAGSDSENQTYCSKTGNFF
FT                   ESGTPNQQGRRTDLQAVVSAIQNGEITTPKMVAELHGAVYIKYHRGIEKILHQLHPVPP
FT                   RDIPTELRVYWGPPGSGKSRRALEEARTLGGSIYYKPRGLWWDGYEQQNCVIIDDFYGW
FT                   IKYDELLKICDRYPYKVQIKGSFQEFTSKYIFITSNVDTCDWYKFAGYNVNAIERRITI
FT                   KEYMD"
FT   gene            complement(1014..1706)
FT                   /gene="cap"
FT   CDS             complement(1014..1706)
FT                   /codon_start=1
FT                   /gene="cap"
FT                   /product="capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:D4N3Q9"
FT                   /protein_id="ADD62474.1"
FT                   /translation="MPAVRRSRVRRRKPVYRRRRYRRRYRRKRGTTKGFKVKLTETQLV
FT                   QANVTKNELKELHIDLANFTEFNRLQDSFEYFVPRLVVHTIIPQQNVSNTSTSAVPPYC
FT                   MFPYHKNIPSTGVGWTDYLSVDKAKLYRGTQVGRMAFVPSIGMLNNVEINCVGSDCKLN
FT                   KFYRQDIFRPKLRCPDSNAPEASQLPRLFCGGVCFAGNSFLKESDKSYFMIKTDVYLTL
FT                   YNQNTLEH"
XX
SQ   Sequence 1795 BP; 518 A; 416 C; 417 G; 444 T; 0 other;
     ataccgtcac ttcgatgttg gcgcgccccg acagtgggga gtgcaaaggc gccgctacgc        60
     ggcgccgtgg caaatactct caactaacat gcctagcggg atagcggcta ggggcgcgcc       120
     aatgccggct tgggttcgct tcgctcaccc accggcatgg cgttggcaga cgtccgtggc       180
     atggcaaaca gtactgtgcg ccgtttctgc ttcacgtgga acaattattc agaactagag       240
     tacgtgctgt gctgcgaatt cattaaaaaa tattgctgtt atggcatcgt tggaaaagaa       300
     atcgctccca ataccgggac acaccatctg caggggtttt gcaatctcga gaaacccatg       360
     cgcttcagta ccatcaagaa gcgtctcgat agtagaatcc atattgagaa ggcagctgga       420
     tccgactcag aaaaccaaac gtactgttct aagacaggca acttttttga atcgggaacg       480
     ccaaaccaac agggacgcag gacggatctt caggccgtcg tttctgccat acagaatgga       540
     gaaatcacca cacccaaaat ggtcgctgaa ctacatggcg ccgtgtatat caaataccat       600
     cgtggaatcg aaaaaatcct tcatcagctg catccagtgc cgcctaggga tataccgact       660
     gaactgcggg tgtattgggg accacccggt tctgggaaat ctcgcagggc gttggaggaa       720
     gcacgtactc tgggaggaag catctactac aaaccacgag gtctctggtg ggacggatat       780
     gaacagcaga attgtgtcat catcgacgac ttttatggtt ggataaaata cgacgagcta       840
     ttaaaaatat gtgacagata tccatacaag gttcaaataa aaggatcatt ccaagaattc       900
     acatccaaat atatctttat tacatcaaac gttgatacat gcgattggta caaattcgcc       960
     ggatacaatg taaacgctat agagcgtcgt attacaataa aggagtacat ggactaatgt      1020
     tccaatgtat tttgattgta caatgttaaa taaacatctg tttttatcat aaaataagac      1080
     ttgtcagatt ctttcaaaaa tgaatttcca gcaaaacaca cccctccgca aaataatctt      1140
     ggtaattgcg aagcctcggg agcattagaa tccgggcatc tcagtttagg tctaaatata      1200
     tcctgacgat aaaacttatt cagcttgcaa tcgcttccca cgcagtttat ctccacatta      1260
     ttcagcattc caatggaagg aacaaaagcc attcttccta cttgggttcc acggtagagt      1320
     ttggccttat cgacagagag gtaatcagtc caaccaactc ctgttgacgg aatattttta      1380
     tgataaggaa acatgcaata aggaggaaca gcactagtac tggtgttgga cacattctgc      1440
     tggggaatga tagtgtgcac gacgaggcgg ggcacgaaat attcaaaact atcttgaagt      1500
     cgattaaatt cagtaaaatt agccagatct atatgcaatt ctttcaactc attttttgtt      1560
     acatttgcct gcacaagttg cgtctcggtg agctttactt tgaaaccctt ggttgttcca      1620
     cgcttcctac ggtacctacg ccggtaccgc ctacggcggt aaaccggttt ccgtcggcga      1680
     actcgggagc ggcgcacagc tggcatggtc aacgaacctg ttacaactgg cacgcgaacc      1740
     ttgaaaagtg aaaggcgcgc gctacgacgt ctgctacgaa gtgacgggta atact           1795
//