ID   GQ404848; SV 1; circular; genomic DNA; STD; VRL; 1741 BP.
XX
AC   GQ404848;
XX
DT   15-MAR-2010 (Rel. 104, Created)
DT   15-MAR-2010 (Rel. 104, Last updated, Version 1)
XX
DE   Cyclovirus PK6197, complete genome.
XX
KW   .
XX
OS   Cyclovirus PK6197
OC   Viruses; ssDNA viruses; Circoviridae; unclassified Circoviridae.
XX
RN   [1]
RP   1-1741
RX   DOI; 10.1128/JVI.02109-09.
RX   PUBMED; 20007276.
RA   Li L., Kapoor A., Slikas B., Bamidele O.S., Wang C., Shaukat S.,
RA   Masroor M.A., Wilson M.L., Ndjango J.B., Peeters M., Gross-Camp N.D.,
RA   Muller M.N., Hahn B.H., Wolfe N.D., Triki H., Bartkus J., Zaidi S.Z.,
RA   Delwart E.;
RT   "Multiple diverse circoviruses infect farm animals and are commonly found
RT   in human and chimpanzee feces";
RL   J. Virol. 84(4):1674-1682(2010).
XX
RN   [2]
RP   1-1741
RA   Li L., Kapoor A., Delwart E.;
RT   ;
RL   Submitted (23-JUL-2009) to the INSDC.
RL   Department of Laboratory Medicine, University of California, San Francisco,
RL   Blood Systems Research Institute, 270 Masonic Ave, San Francisco, CA 94118,
RL   USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1741
FT                   /organism="Cyclovirus PK6197"
FT                   /host="Homo sapiens"
FT                   /isolate="PK6197"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan"
FT                   /isolation_source="stool"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:742919"
FT   gene            23..862
FT                   /gene="rep"
FT   CDS             23..862
FT                   /codon_start=1
FT                   /gene="rep"
FT                   /product="replication-association protein"
FT                   /db_xref="GOA:D4N3P4"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D4N3P4"
FT                   /protein_id="ADD62459.1"
FT                   /translation="MANRTVRRFCFTWNNYPDTAYEKCEIFIKKFCKYGIVGEELAPTT
FT                   GTPHLQGFCNLHKPTRFSTIKKHLDNSIHIEKANGSDEQNQAYCSKTGIFFEEGSPAKQ
FT                   GQRNDLQLLVDDVIGHPDIKTKDIATKYPSTFVRYFRGIKELQRVVHPVAERMFKTEVY
FT                   YYWGPPGTGKSRRALEEAQATGNGSIYYKPRGLWWDGYEQQDSVIIDDFYGWIKYDELL
FT                   KITDRYPYKVQIKGGFEEFTSKKIFITSNVDTDELYKFNGYNTAALERRLTVKEYMS"
FT   gene            complement(859..1515)
FT                   /gene="cap"
FT   CDS             complement(859..1515)
FT                   /codon_start=1
FT                   /gene="cap"
FT                   /product="capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:D4N3P5"
FT                   /protein_id="ADD62460.1"
FT                   /translation="MALRRYRRVRRPLRRFRRRRRKFFRRKSRVGKSDLLVKLTKIDTV
FT                   NVDISKINVWSLSYLPTDFSEYNELKKNFEYCVFLKERVTIYPMQNIANNSTSQVPAYL
FT                   MAPWHRGGPASATFNTYLTIDRAKIFRGTQVGSQTYVPSVLIEGLSDSGGGTSSPDMIQ
FT                   FRPKIYISNSQTRAIRIYNGIIAFQGNGEMTGTARYNVKHDVWVVFKKQNTLASL"
XX
SQ   Sequence 1741 BP; 544 A; 404 C; 354 G; 439 T; 0 other;
     atacccgtca cttcgttgtg aaatggcaaa ccgtacagtg cgccgattct gctttacgtg        60
     gaacaactat ccagacacag cttatgaaaa gtgcgaaatt ttcatcaaaa aattctgcaa       120
     atatggaatc gtgggagaag aactcgctcc aacaaccggg acgcctcacc tacaagggtt       180
     ttgtaactta cataaaccca cacgcttcag taccatcaaa aagcatctcg ataactcaat       240
     ccatattgag aaggctaacg gatccgacga acaaaaccag gcttactgtt cgaagacagg       300
     catatttttt gaagagggta gtcccgctaa acaagggcaa cgcaacgatt tacaacttct       360
     cgtggatgat gttatcggac accctgatat taaaacaaaa gatattgcca ccaaatatcc       420
     ttctacattt gttagatact tccgaggaat taaagaatta caacgagtgg ttcatccagt       480
     ggcagaacga atgttcaaaa ctgaggtgta ctattattgg ggacctcctg gaactggcaa       540
     aagtagaaga gccctagaag aagcacaagc aacaggaaac ggatcaatct actacaaacc       600
     acgcggccta tggtgggacg ggtacgaaca acaagactcc gttattatag acgacttcta       660
     tggttggata aaatatgacg aacttctaaa aattacagac cgctacccat acaaggtaca       720
     aataaaagga ggattcgaag aatttacatc aaaaaaaatc tttattacat caaatgtgga       780
     tacagacgaa ctatataaat tcaacggtta caacacagct gctttagaac gtcgtttaac       840
     agtaaaagaa tatatgtctt aaagcgatgc taatgtattc tgttttttaa atacaaccca       900
     tacatcatgt ttaacattat atcttgctgt accagtcatt tcaccattcc cttgaaacgc       960
     tattatacca ttatatatcc ttatagctct tgtctgcgaa ttcgatatat atatttttgg      1020
     gcgaaattga atcatatcag gcgacgacgt gcctccacca gaatcggaca atccctctat      1080
     tagcactgag ggaacgtagg tctgtgatcc aacttgagta cctctaaata ttttagctcg      1140
     atcaattgtc aaatatgtat taaacgtagc agatgcgggt cccccacgat gccatggtgc      1200
     catcaaatat gccggtactt gactagtaga attattagca atattctgca tcggatatat      1260
     agtaactctc tccttcaaaa acacacaata ttcaaaattc ttttttaact cattgtactc      1320
     cgaaaaatcc gtcgggagat atgacaaaga ccacacgtta attttagaaa tgtcaacatt      1380
     aaccgtatcg attttggtaa gtttaaccaa gagatcagat tttccaacgc gacttttacg      1440
     gcgaaaaaac ttacgacggc gtcggcgaaa ccgccgtaac ggtcgccgaa cccgtctata      1500
     gcgcctcaag gccatgcctt tcactttgac gctcggttaa atataactcc acttcaggcg      1560
     gcagactgtt gccaagtgaa cgttgcgccc cccccctcgg ccggggagcc tgcccggccg      1620
     gccccccccc ccgccggccg ggcggccccc ggcgggggga gggcgtgcgt gtagaaactc      1680
     gtttgggcgg ttgagtcaga ccggttacga agttacggtt acgaagtgac ggggtaatac      1740
     t                                                                      1741
//