ID   GQ404847; SV 1; circular; genomic DNA; STD; VRL; 1759 BP.
XX
AC   GQ404847;
XX
DT   15-MAR-2010 (Rel. 104, Created)
DT   15-MAR-2010 (Rel. 104, Last updated, Version 1)
XX
DE   Cyclovirus PK5510, complete genome.
XX
KW   .
XX
OS   Cyclovirus PK5510
OC   Viruses; ssDNA viruses; Circoviridae; unclassified Circoviridae.
XX
RN   [1]
RP   1-1759
RX   DOI; 10.1128/JVI.02109-09.
RX   PUBMED; 20007276.
RA   Li L., Kapoor A., Slikas B., Bamidele O.S., Wang C., Shaukat S.,
RA   Masroor M.A., Wilson M.L., Ndjango J.B., Peeters M., Gross-Camp N.D.,
RA   Muller M.N., Hahn B.H., Wolfe N.D., Triki H., Bartkus J., Zaidi S.Z.,
RA   Delwart E.;
RT   "Multiple diverse circoviruses infect farm animals and are commonly found
RT   in human and chimpanzee feces";
RL   J. Virol. 84(4):1674-1682(2010).
XX
RN   [2]
RP   1-1759
RA   Li L., Kapoor A., Delwart E.;
RT   ;
RL   Submitted (23-JUL-2009) to the INSDC.
RL   Department of Laboratory Medicine, University of California, San Francisco,
RL   Blood Systems Research Institute, 270 Masonic Ave, San Francisco, CA 94118,
RL   USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1759
FT                   /organism="Cyclovirus PK5510"
FT                   /host="Homo sapiens"
FT                   /isolate="PK5510"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan"
FT                   /isolation_source="stool"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:742918"
FT   gene            191..1033
FT                   /gene="rep"
FT   CDS             191..1033
FT                   /codon_start=1
FT                   /gene="rep"
FT                   /product="replication-association protein"
FT                   /db_xref="GOA:D4N3P2"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D4N3P2"
FT                   /protein_id="ADD62457.1"
FT                   /translation="MSNSTVRRFCFTWNNYTELNYALCQEFIKKYCKYGIVGKELAPTT
FT                   NTPHLQGFCNLQKPMRFSTIKKRLDNGIHIEKSMGSDTQNQTYCSKSGEFFEAGDPQCQ
FT                   GKRNDLQSVVDTIQAGNGSLSSIANEHPTAYIRYFRGIQEYIKTVRPIPPRYHKTEVRY
FT                   YHGPPGSGKSRRALEEATALASDLNDIYYKPRGTWWDGYKQQSCVIIDDFYGWIKYDEM
FT                   LKICDRYPYKVQIKGGFEEFTSKYIWITSNIDTNLLYKFNDYNDTAFVRRIEIKLLIE"
FT   gene            complement(1019..1678)
FT                   /gene="cap"
FT   CDS             complement(1019..1678)
FT                   /codon_start=1
FT                   /gene="cap"
FT                   /product="capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:D4N3P3"
FT                   /protein_id="ADD62458.1"
FT                   /translation="MPFSRRRRVVRRRKPVRRLRRRRRRFFKRAGRGSFRVKLTRFVSI
FT                   TQDISKTTQFSFEITPSDFTEFATLADAFEAVRFTRAKVTVLPQQNVSNNSTSLIPAYC
FT                   MFPWHKELPTVATFNGFLSIDRAKCFRGTQVGIQHYVPSTLDSIQTKGAAGYEVQSVQT
FT                   KYKPTIQISGGASTVVLYTGALGMQALSDAPENAQAHYNIKIDMWCTFINQTSFNK"
XX
SQ   Sequence 1759 BP; 552 A; 393 C; 392 G; 422 T; 0 other;
     ataccacgac ttcgttgtag cacgccaacc ggttccagcg cgtcaagaat aatatatccc        60
     ctccacagat ggtacctcga acgggttaag tagcgccgcc caatgcggga ggcaaccgga       120
     atcgacgcgg gcactcgcgc tgacgcgctc gtgctattcc gcgtcgagcc agtgacccgc       180
     atgcggcgtg atgtccaaca gtactgtgcg tagattttgt tttacttgga acaattatac       240
     tgaattgaac tacgcgctgt gtcaagagtt tatcaaaaaa tactgcaaat atggcatcgt       300
     tggaaaggaa ctcgctccaa caaccaacac gcctcatcta caaggattct gtaatcttca       360
     aaaacccatg cgcttcagta ccatcaaaaa gcgtctcgat aacggaatcc atattgagaa       420
     gtcaatgggg agtgacaccc aaaaccaaac gtactgttca aaatcaggcg agttttttga       480
     agcgggtgac cctcaatgcc aagggaagag aaatgatcta caatccgtcg tggataccat       540
     ccaggctggg aatgggtctt tatccagtat cgcgaatgaa caccccacag cttatatacg       600
     gtactttcgt ggaatccaag agtacatcaa gaccgttaga cctattcccc cacgatacca       660
     caaaactgag gtcagatatt accacggacc tccagggtca gggaaatcga gacgggcact       720
     ggaagaggca acggctctcg catctgatct aaacgatatc tattacaaac cacgtgggac       780
     ttggtgggac ggatacaagc agcaatcatg cgtcatcata gacgactttt atgggtggat       840
     aaaatatgac gaaatgttaa aaatatgcga cagatatcca tataaagttc aaataaaggg       900
     ggggtttgag gaattcacaa gtaaatacat ttggattaca agtaatattg ataccaattt       960
     attgtacaaa tttaatgatt acaacgatac agcttttgta agacgaattg aaataaaatt      1020
     acttattgaa tgaagtttga ttaataaatg tacaccacat atcaattttt atattatagt      1080
     gcgcctgagc attttcagga gcgtcgctaa gcgcttgcat acccaaggca ccagtataca      1140
     aaacaacagt tgaggcccct ccagatattt gaattgtagg tttatacttt gtttgaacag      1200
     actgaacttc atatcctgct gctcctttag tctgaataga atccaatgtt gaaggaacgt      1260
     aatgctgaat ccccacttgc gttccacgaa agcatttagc ccgatcaata gacaaaaaac      1320
     cattaaaagt tgcaacagtt ggcaactcct tatgccatgg aaacatacaa taagcaggga      1380
     ttaaacttgt tgaattgttg gaaacattct gctgcgggag tacggtaact ttggctcgtg      1440
     tgaaacgaac tgcctcaaaa gcatcagcca atgttgcaaa ttctgtaaaa tcgctaggag      1500
     taatctcaaa ggagaactga gtggtcttag aaatatcctg agtaattgaa acgaagcgag      1560
     taagcttaac tctaaaagat ccacgaccgg cccgcttaaa aaacctccga cggcgtcggc      1620
     gaagtcgccg aaccggttta cggcgccgca caacacgtct gcgtcgagag aaaggcattg      1680
     cggcactgat gcgctcgacc ttgtaaagtg aaaggagcgc gcctgctaca aggtgcgcta      1740
     cgaagtcgtg ggtaatact                                                   1759
//