ID   GQ404846; SV 1; circular; genomic DNA; STD; VRL; 1740 BP.
XX
AC   GQ404846;
XX
DT   15-MAR-2010 (Rel. 104, Created)
DT   15-MAR-2010 (Rel. 104, Last updated, Version 1)
XX
DE   Cyclovirus PK5222, complete genome.
XX
KW   .
XX
OS   Cyclovirus PK5222
OC   Viruses; ssDNA viruses; Circoviridae; unclassified Circoviridae.
XX
RN   [1]
RP   1-1740
RX   DOI; 10.1128/JVI.02109-09.
RX   PUBMED; 20007276.
RA   Li L., Kapoor A., Slikas B., Bamidele O.S., Wang C., Shaukat S.,
RA   Masroor M.A., Wilson M.L., Ndjango J.B., Peeters M., Gross-Camp N.D.,
RA   Muller M.N., Hahn B.H., Wolfe N.D., Triki H., Bartkus J., Zaidi S.Z.,
RA   Delwart E.;
RT   "Multiple diverse circoviruses infect farm animals and are commonly found
RT   in human and chimpanzee feces";
RL   J. Virol. 84(4):1674-1682(2010).
XX
RN   [2]
RP   1-1740
RA   Li L., Kapoor A., Delwart E.;
RT   ;
RL   Submitted (23-JUL-2009) to the INSDC.
RL   Department of Laboratory Medicine, University of California, San Francisco,
RL   Blood Systems Research Institute, 270 Masonic Ave, San Francisco, CA 94118,
RL   USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1740
FT                   /organism="Cyclovirus PK5222"
FT                   /host="Homo sapiens"
FT                   /isolate="PK5222"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan"
FT                   /isolation_source="stool"
FT                   /collection_date="2006"
FT                   /db_xref="taxon:742917"
FT   gene            23..862
FT                   /gene="rep"
FT   CDS             23..862
FT                   /codon_start=1
FT                   /gene="rep"
FT                   /product="replication-association protein"
FT                   /db_xref="GOA:D4N3P0"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D4N3P0"
FT                   /protein_id="ADD62455.1"
FT                   /translation="MANRTVRRFCFTWNNYPDTAYEKCETFIQKFCKYGIVGEELAPTT
FT                   GTPHLQGFCNLRKPTRFSTIKKHLDNSIHIEKANGSDEQNQAYCSKTGIFFEEGSPTKQ
FT                   GQRNDLQLLVDDVIGHPDIKTKDIAAKYPSTFVRYFRGIKELQRVVHPVAERMFKTEVY
FT                   YYWGPPGTGKSRRALEEAQATGNGSIYYKPRGLWWDGYEQQDSVIIDDFYGWIKYDELL
FT                   KITDRYPYKVQIKGGFEEFTSKKIFITSNVDTDELYKFNGYNTAALERRLTVKEYMS"
FT   gene            complement(859..1515)
FT                   /gene="cap"
FT   CDS             complement(859..1515)
FT                   /codon_start=1
FT                   /gene="cap"
FT                   /product="capsid protein"
FT                   /db_xref="UniProtKB/TrEMBL:D4N3P1"
FT                   /protein_id="ADD62456.1"
FT                   /translation="MALRRYRRVRRPLRRYRRRRRKFFRRKSRVGKSDLLVKLTKIDTV
FT                   NVDISKINVWSLSYLPTDFSEYNELKKNFEYCVFLKERVTIYPMQNIANNSTSQVPAYL
FT                   MAPWHRGGPASATFNTYLTIDRAKIFRGTQVGSQTYVPSVLIEGLSDSGGGTSSPDMIQ
FT                   FRPKVYISNSQTRAIRIYNGIIAFQGNGEMTGTARYNVKHDVWVVFKKQNTLASL"
XX
SQ   Sequence 1740 BP; 536 A; 402 C; 357 G; 445 T; 0 other;
     atacccgtca cttcgttgtg aaatggcaaa ccgtacagtg cgccgattct gctttacatg        60
     gaacaactat cctgacacag cgtacgaaaa gtgtgaaaca ttcatacaaa agttctgcaa       120
     atatggaatc gtgggagaag aactcgctcc aacaacaggg acgcctcacc tacaagggtt       180
     ttgtaactta cgtaaaccca cacgcttcag taccatcaag aagcatctcg ataactcaat       240
     ccatattgag aaggcaaacg gatccgacga acagaaccaa gcatactgtt cgaagacagg       300
     catatttttt gaagagggta gtcccactaa acaagggcaa cgcaacgatt tacaacttct       360
     cgtggatgat gttatcggac accctgatat taaaacaaaa gatattgccg ccaaatatcc       420
     ttctacattt gttagatact tcagaggaat taaagaatta caacgagtgg ttcatccagt       480
     ggcagaaaga atgttcaaaa ctgaggtgta ctattattgg ggacctcctg gaactggcaa       540
     aagtagaaga gccctagaag aagcccaggc gacaggaaac ggatcgatat actacaaacc       600
     acgcggcctc tggtgggacg ggtacgaaca acaagattcc gttattatag acgacttcta       660
     cggatggata aaatatgacg aactacttaa aattacagac cgctacccat acaaggtaca       720
     aataaaagga ggattcgaag aatttacatc aaaaaaaatt tttattacat caaacgttga       780
     tacagatgaa ctttacaaat ttaatggtta caacacagca gctttagaac gccgtttaac       840
     cgtcaaggaa tatatgtctt aaagcgacgc caatgtattc tgtttcttaa atacaaccca       900
     tacatcatgt ttaacattat atctcgctgt tccagtcatt tcaccattcc cttgaaaagc       960
     tattattcca ttataaatcc ttatagctct tgtctgagaa ttagatatat atacttttgg      1020
     cctaaactgt atcatatcgg gtgaggatgt accacctccg gaatctgata gtccctctat      1080
     taatactgaa ggtacatatg tctgcgatcc aacttgagta cctctaaata ttttagctct      1140
     atcgattgtc aaataagtat taaacgtagc tgatgctggt cctccgcgat gccatggggc      1200
     catcaaatat gccggtactt gacttgtcga attattagca atattctgca tcggatatat      1260
     agtaactctc tctttcaaaa aaacacaata ttcaaaattc tttttcaact cattgtactc      1320
     cgaaaaatcc gtcgggagat atgacaaaga ccacacgtta attttagaaa tgtcaacatt      1380
     aaccgtatcg attttggtaa gtttaaccaa gagatcagat tttccgacgc gacttttacg      1440
     gcgaaaaaac ttgcgacggc gtcgacgata ccgccgcagc ggtcgccgaa cccgtctata      1500
     acgcctcaag gccatgcctt tcactttgac gctcggtata aaataactcc acttcaggcg      1560
     gctgcctgtt gccaagtgaa cgttgcgccc cccccctcgg ccggggagcc tgcccggccg      1620
     gtcccccccc cgccggccgg gcggcccccg gcggggggag ggcgtgcgtg ttgaaacttg      1680
     tttgggcggt tgagtcagac cagttacgaa gttacggtta cgaagtgacg gggtaatact      1740
//