ID GQ351275; SV 1; circular; genomic DNA; STD; VRL; 2589 BP. XX AC GQ351275; XX DT 14-JAN-2010 (Rel. 103, Created) DT 14-JAN-2010 (Rel. 103, Last updated, Version 1) XX DE Chimpanzee stool associated circular ssDNA virus isolate GM510, complete DE genome. XX KW . XX OS Chimpanzee stool associated circular ssDNA virus OC Viruses; ssDNA viruses; unclassified ssDNA viruses. XX RN [1] RP 1-2589 RX DOI; 10.1099/vir.0.015446-0. RX PUBMED; 19759238. RA Blinkova O., Victoria J., Li Y., Keele B.F., Sanz C., Ndjango J.B., RA Peeters M., Travis D., Lonsdorf E.V., Wilson M.L., Pusey A.E., Hahn B.H., RA Delwart E.L.; RT "Novel circular DNA viruses in stool samples of wild-living chimpanzees"; RL J. Gen. Virol. 91(Pt 1):74-86(2010). XX RN [2] RP 1-2589 RA Blinkova O., Victoria J., Li Y., Keele B.F., Hahn B.H., Delwart E.L.; RT ; RL Submitted (30-JUN-2009) to the INSDC. RL Molecular Virology, Blood Systems Research Institute, 270 Masonic Ave, RL BSRI, San Francisco, CA 94118, USA XX FH Key Location/Qualifiers FH FT source 1..2589 FT /organism="Chimpanzee stool associated circular ssDNA FT virus" FT /host="Pan troglodytes (chimpanzee)" FT /isolate="GM510" FT /mol_type="genomic DNA" FT /country="Tanzania" FT /isolation_source="stool" FT /collection_date="May-2004" FT /db_xref="taxon:702718" FT CDS join(2309..2589,1..34) FT /codon_start=1 FT /transl_except=(pos:2309..2311,aa:Met) FT /product="ORF3" FT /db_xref="UniProtKB/TrEMBL:D2WKF5" FT /protein_id="ADB24812.1" FT /translation="MYLSEHSSVQIEIGPSHPNTALRYAVQSLTTSTRTLHLTCQCPYS FT PLPSSSPMTHLWISRSRKILNQRISSALVCVLCIVVIMSTDIPSVNKCISERPSWTTPL FT " FT CDS 126..557 FT /codon_start=1 FT /product="ORF9" FT /db_xref="UniProtKB/TrEMBL:D2WKF6" FT /protein_id="ADB24814.1" FT /translation="MAYYRRSYRRSYNRRPVRRSYGKKVLPQVIRMFVKVSETYDLSTQ FT TDKMGFVGIHTPEGKLVYNMWSGLFKNFRKFRYASCDVTMACASMLPADPLQIGVEAGD FT IAPQDMFNPILYKAVSMTLCLRCSIGSTSVRLVLPPQSR" FT CDS 494..1309 FT /codon_start=1 FT /product="putative capsid protein" FT /note="ORF2" FT /db_xref="UniProtKB/TrEMBL:D2WKF7" FT /protein_id="ADB24811.1" FT /translation="MSTLLNRLYVGKAGSTSAIAMNSVVAQNDEDFGYDASKDVDQFAM FT YYGLLADSDGWRKAMPQAGLQMKGLKPLVFSMTTNFGQPSNVGLPNGAMVYTPNGAGKS FT SVENVADSTLFQYMRGPTMAMPALDTFIQCSGDTVPLGEDSVSPTPVPEVSGSSVPALS FT GTVNMPYSWCTPNIDTPDAFVAAIVLPPAKLNRLYYRMKVTWTVEFSGLRPDTDLTNWY FT GLALAGVQSYGSDYITQTATIARSTSTANTSGMVDTGDVSLTKVMEGAN" FT gene complement(1774..2589) FT /gene="rep" FT CDS complement(1774..2589) FT /codon_start=1 FT /gene="rep" FT /product="putative replicase protein" FT /note="ORF1" FT /db_xref="UniProtKB/TrEMBL:D2WKF8" FT /protein_id="ADB24810.1" FT /translation="MHLFTEGISVDIMTTMQRTHTNAELIRWFKIFRDLDIHKWVIGLE FT EGKGEYGHWQVRCNVRVEVVNDWTAYLRAVFGWLGPISIWTEECSDKYTYETKEGKYWA FT SWDTMGARQQRFGKMRWNQEGAVQALQRTNDREIVVWYDEGGNMGKSWLCGHLFETGQA FT YYIPPYMTSIQSMIQTVASLVLQDRETGYPPRPLIVIDIPRSWKWSTELYTAIEAIKGG FT LIMDPRYGARPVNIHGTKVIVLTNTKPKLDKLSEDRWVLYDPMDYLMML" FT CDS complement(1835..2473) FT /codon_start=1 FT /gene="rep" FT /product="ORF7" FT /db_xref="UniProtKB/TrEMBL:D2WKF9" FT /protein_id="ADB24813.1" FT /translation="MGHRARRRQRRIRALAGQMQCPGRSGQRLDSIPKSGIWMARTNLN FT LDRGMFRQIHLRDQGRQILGIMGYDGSKATAVRENEMEPRRGRTGPTADERPRDSSLVR FT RRRQHGQIVALRAPIRDRAGVLHTAVHDKHTKHDSNGRITGPTGPGNRVSPAPPHSHRH FT SEIVEMEHRAIHGYRSDQGRANHGPEIRSAPGKHTRHKSDRANKHQAQA" FT CDS 2043..2396 FT /codon_start=1 FT /transl_except=(pos:2043..2045,aa:Met) FT /product="ORF10" FT /db_xref="UniProtKB/TrEMBL:D2WKG0" FT /protein_id="ADB24815.1" FT /translation="MMRPFESCFVCLSCTAVCSTPALSRIGARKATICPCCRLRRTKLL FT SRGRSSAVGPVRPLLGSISFSRTAVALLPSYPMMPNICLPWSRRCICRNIPRSRLRLVL FT AIQIPLLGMLSSR" XX SQ Sequence 2589 BP; 544 A; 662 C; 640 G; 743 T; 0 other; atccgagagg ccgtcgtgga caaccccttt ataagcacgt gtacccgaac atcggtaacg 60 ctcaaataaa agtagcgtgt tgcttgtaac gcaattacct aaactaattg caggaatgtg 120 taaaaatggc gtattatagg cgctcgtata gaaggtccta caaccgcagg cctgttcgca 180 ggtcttatgg gaagaaggta ctaccgcagg tgattcgaat gtttgtaaaa gtgtctgaaa 240 cgtatgacct gtctacccag actgataaaa tgggattcgt cgggattcat actcctgagg 300 gcaagttggt ctacaatatg tggtctggcc tgttcaagaa cttcagaaaa tttaggtatg 360 cgtcctgcga cgtgactatg gcgtgcgcat cgatgctacc cgctgaccct ctccagatag 420 gcgttgaggc tggtgacatt gctccgcagg atatgttcaa ccccattctg tataaggcgg 480 tctccatgac tctatgtcta cgctgctcaa taggctctac gtcggtaagg ctggttctac 540 ctccgcaatc gcgatgaatt ctgttgtcgc tcagaacgat gaggattttg gatacgacgc 600 ttcgaaggat gttgaccagt tcgcaatgta ctacggactt ctcgccgatt ctgatgggtg 660 gcgtaaagcg atgcctcaag cgggtcttca gatgaaagga ctgaaaccgc tggttttctc 720 gatgactacg aacttcggtc agccttctaa tgtgggcctg cctaatggcg ctatggtcta 780 tactccgaac ggtgctggta agtcttctgt ggagaatgtc gcggattcta cgcttttcca 840 gtatatgaga ggtccgacta tggcgatgcc tgcgctggat accttcattc agtgttctgg 900 ggatactgtc cctctcggag aagattccgt ttcaccgact cctgttcctg aagtctctgg 960 ttcgtctgtt ccggctctct ctggtactgt caatatgccg tactcttggt gtactccgaa 1020 cattgacact ccggatgcgt tcgttgccgc gattgtgctt cccccggcta aactcaaccg 1080 tctctactac cgtatgaagg tcacttggac tgtcgagttc tctggactta ggcccgatac 1140 cgacctgact aactggtatg gtctcgctct cgcaggtgtc cagtcctatg gctctgacta 1200 catcacccag actgctacta ttgctaggtc tacctccacg gctaacacgt cgggaatggt 1260 agatactggt gacgtgtcgc taaccaaggt aatggaaggt gccaattgat gtttgattac 1320 tttgaatccg attcttgggc caagtggtcg tactacctca aggcggtaga ggctggtagg 1380 aatcccctct atcgtaacct tgtgtccttt ggcgaccatg ttcggtatat gaatgactat 1440 atgactaacc gcgggttgtc ttacaagtct attcgttatc cgtctatgac catcggatgg 1500 caaggtgtct cgtctgctac ctctaacgcg cttaattttg tgtcctcgaa cattgagagg 1560 ttgtacatat gattgtggag ttggctatca tattcgctct caccgctatc ggattgtcct 1620 tcaccgtgaa gtacaagaaa aaagacgagt aacctgaacc gcgctattcc cgcgttagcg 1680 ctcaaacctt ttctaaatcc tttaccccct aaagggggta aaagagggga cctcaatagt 1740 tacgaaaaga ggtcccctcc catcccccgc ttgtcaaagc atcatgaggt agtccattgg 1800 gtcgtaaaga acccaacgat cttcggagag tttgtcaagc ttgggcttgg tgtttgttag 1860 cacgatcact tttgtgccgt gtatgtttac cgggcgcgct ccgtatctcg ggtccatgat 1920 tagcccgccc ttgatcgctt cgatagccgt gtatagctcg gtgctccatt tccacgatct 1980 cggaatgtcg atgactatga gggggcgcgg gggataccct gtttcccggt cctgtaggac 2040 cagtgatgcg accgtttgaa tcatgctttg tatgcttgtc atgtacggcg gtatgtagta 2100 cgcctgccct gtctcgaata ggtgcccgca aagccacgat ttgcccatgt tgccgccttc 2160 gtcgtaccaa actactatct cgcggtcgtt cgtccgctgt agggcctgta cggccccttc 2220 ttggttccat ctcattttcc cgaaccgctg ttgccttgct cccatcgtat cccatgatgc 2280 ccaatatttg ccttccttgg tctcgtaggt gtatttgtcg gaacattcct cggtccagat 2340 tgagattggt cctagccatc caaataccgc tcttaggtat gctgtccagt cgttgaccac 2400 ttctacccgg acattgcatc tgacctgcca gtgcccgtat tctcctttgc cttcttctag 2460 cccgatgacc catttgtgga tatcgaggtc gcggaagatt ttgaaccaac ggattagttc 2520 ggcgttggta tgcgttctct gcattgttgt cattatgtcc actgatatcc cttccgtaaa 2580 caagtgcat 2589 //