ID FN396963; SV 1; circular; genomic DNA; STD; VRL; 2728 BP. XX AC FN396963; XX DT 05-JUN-2009 (Rel. 101, Created) DT 05-JUN-2009 (Rel. 101, Last updated, Version 1) XX DE Clerodendrum golden mosaic China virus complete DNA-B genome, isolate YX1 XX KW complete genome. XX OS Clerodendrum golden mosaic China virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-2728 RA Zhou X.P.; RT ; RL Submitted (31-MAY-2009) to the INSDC. RL Zhou X.P., Zhejiang University, Institute of Biotechnology, NO. 268, RL Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RA Li J., Zhou X.; RT "Molecular characterization of begomoviruses in Clerodendrum cyrtophyllum RT Turcz. in China"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..2728 FT /organism="Clerodendrum golden mosaic China virus" FT /mol_type="genomic DNA" FT /country="China:Jiangsu province" FT /lat_lon="31.21 N 119.49 E" FT /isolation_source="Clerodendrum cyrtophyllum Turcz." FT /collected_by="Xue-ping Zhou" FT /collection_date="11-May-2008" FT /db_xref="taxon:559878" FT CDS 260..1096 FT /gene="BV1" FT /product="BV1 protein" FT /db_xref="GOA:C5J9H7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:C5J9H7" FT /protein_id="CAZ40056.1" FT /translation="MPAASSDRLGSWYRRISTPMYPRRRLATGPLYSPRLGRYISNRPR FT SRVPAMPYAHRRHGRVRSSLFSRNSDGVSMKVQTIEEVQNGPQYVLTNNTSKVSYITYP FT SISRSAFSSRVNDYVKVLSISASGSVVVKQVGSTPGATSTCINGIFTTVLVCDKRPSEF FT SSSDPIVPYGELFGLEHGSCSKLRVRDNHRDRFRVLQQRKCIVNTSLSTYVFKFDYTVH FT MRHYPFWVRFKDTPSLEASGRYGNIAKNALVLYYVWLCDSPVTAEVHVMYHTMYLG" FT CDS complement(1114..1959) FT /gene="BC1" FT /product="BC1 protein" FT /db_xref="GOA:C5J9H8" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:C5J9H8" FT /protein_id="CAZ40057.1" FT /translation="METHNSTLAYTTSDRTEYQLSNDLTDVTLLFPSTLDQQLSRLRGR FT CLRIDHVILEYRNQVPINATGHVIIEMHDTRLGDGDSKQAEFTIPIGCNCNIHYYSSSY FT FSPKDPNPWRVMYRVDNTNVINGVHFCRIQGKLRMSSAKQSSDIQFRSPRIDILSKAYN FT NTHIDFWTVGQTQAQFARRPVMGLRSASARFQRPTIGPGETWASASSIDGPSVADYPYR FT ALNRLDPASLDPGPSASQVNNNVISAGHSNVNDDVINIIKKTVELCMSSNNVTSNAKPV FT " XX SQ Sequence 2728 BP; 737 A; 555 C; 605 G; 831 T; 0 other; accgggtggc cgcgtttcca cctcatatag tgggacccac tccacgtggt cgtacagtcc 60 acatggtact attggtcaaa aagaccaaaa agcccttgta tcctgtcggt gaaattaccc 120 taaagccctt tagacattgg cgagtaagga attgacacgt ggcacttgaa gtcgttcatc 180 ttgagttgcg agtctttccc tgcacaactg aaaatagtat taatactcct tgccgccggg 240 atattaactg tgaaacagaa tgcctgccgc gtctagtgat cgattaggca gttggtaccg 300 acggatcagt actccgatgt atccccgtcg gcgacttgca accggtccct tgtactctcc 360 taggttgggt agatatatat ccaacaggcc aaggtcacgt gtccctgcca tgccgtacgc 420 ccatcggagg catggtcgtg ttcggtcaag tctcttttcc agaaactccg acggagtttc 480 tatgaaggtc cagacgattg aggaagtaca gaatggtccc cagtacgtgc tcaccaacaa 540 tacctcgaag gtgtcatata taacatatcc tagcatctct cgcagtgcat ttagtagtcg 600 tgtaaacgac tatgtgaagg tgctttccat cagtgcctcc ggttccgttg ttgttaagca 660 ggtcggatcg acgccgggtg ctacttccac ttgtatcaac ggcatattca cgaccgtcct 720 tgtgtgcgac aagaggccgt ccgaattctc atctagcgat cccattgtcc cttacggaga 780 gttatttggg ctcgagcatg gatcatgttc caaactacgt gtccgcgaca atcataggga 840 taggtttcgt gtgcttcagc agaggaagtg tattgttaat acttctctct cgacctatgt 900 ttttaaattt gattatactg tacatatgag gcactatccc ttttgggtta gattcaaaga 960 cactcctagt cttgaggcaa gtggtaggta tggaaatata gccaaaaatg ccctggttct 1020 gtactatgtt tggttgtgtg atagtcctgt aactgcagaa gttcatgtga tgtaccatac 1080 aatgtatttg ggataaataa aatttatatt ttattaaaca ggctttgcat ttgaagttac 1140 attgtttgaa gacatacaga gttcgactgt ttttttgatg atgtttatta catcatcatt 1200 tacatttgag tgccctgcac taataacatt gttattaact tgtgatgctg atgggcctgg 1260 gtccaatgat gctgggtcca gtctgttgag agccctatat ggataatctg caactgaagg 1320 cccgtcaatt gagcttgcag aggcccatgt ttctcctggg ccgatagtgg gcctttgaaa 1380 acgggcagat gcagatcgca ggcccatgac tgggcgtctt gcgaattggg cctgggtctg 1440 tccaacagtc cagaaatcaa tatgtgtgtt gttgtaggcc tttgaaagaa tatctattct 1500 tggagatcgg aattggatgt cagatgactg ctttgctgat gacatcctga gcttgccttg 1560 aatcctgcag aaatggaccc cattgatgac atttgtgttg tcgactctgt acattaccct 1620 ccatggattt ggatcctttg gcgaaaaata cgacgacgag tagtagtgaa tgttgcagtt 1680 gcatccaatc ggaatggtaa attccgcttg ttttgagtct ccgtcaccta gtcttgtgtc 1740 gtgcatttca atgatcacat gtccagtcgc gtttatagga acttggttcc tatactccag 1800 tattacgtga tctattctta gacaacgacc tcggagtctt gataattgtt gatcgagggt 1860 tgaaggaaac agcagggtaa cgtcggtgag gtcgttggat agttggtatt ccgtgcgatc 1920 ggaagtcgta taagctagtg ttgagttgtg tgtttccatc gaaacttagt aggagtttga 1980 gcatattggc tcattgatgt ggtggtattt taaaacgaaa aatcgttacg ggacccacat 2040 acctttttca gaggaagaat cttccaaccg aaggaactat cacatactaa caattcattt 2100 atttatcaaa ggccgcgcag cggaacttac actaaatctt agtactcaac gtgtataaac 2160 tctataaatc tttaaaatac agacactcta atcgtctgta gattccattt acctaagcta 2220 cctcagtgtc cctatttgac atgtaattaa tttattaatt atataggtga atcaattaat 2280 ttgttttaag agacttgatg gaaccctaaa tggcaaagtc cgtggatcct aaaatcccat 2340 aaaataaaca aattaatata taataaaagt ctggatggaa ccctaaatgg caaagtccgt 2400 ggatcctaaa atcctataaa aaaataaata aaaaatttat tctatgaatt ttatttcgag 2460 catcgtcgaa tctaaaatcc catcaattaa ataatttatt gcataggagg cagagcagtg 2520 gcatagagaa attctagaga gagaaatatt gcgtgcctgg gctctcgttt tggtgacagc 2580 aaactctgtg gaatgaattg gtgactggtg tacaatatat accttgtcac ctaatggcat 2640 attcgtaaat atccctttac tttttgaatt tgaatttgaa ttttgaatta aatttcggcc 2700 ccaattgcgg ccacccgtta ctaatatt 2728 //