ID FM178379; SV 1; circular; genomic DNA; STD; PRO; 3325165 BP. XX AC FM178379; XX PR Project:PRJEA30703; XX DT 01-OCT-2008 (Rel. 97, Created) DT 23-SEP-2011 (Rel. 110, Last updated, Version 8) XX DE Aliivibrio salmonicida LFI1238 chromosome 1 complete genome XX KW complete genome. XX OS Aliivibrio salmonicida LFI1238 OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; OC Aliivibrio. XX RN [1] RP 1-3325165 RA Hjerde E.; RT ; RL Submitted (26-JUN-2008) to the INSDC. RL Hjerde E., Department of Molecular Biotechnology, University of Tromso, RL Breivika, 9037 Tromso, NORWAY. XX RN [2] RX DOI; 10.1186/1471-2164-9-616. RX PUBMED; 19099551. RA Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N., RA Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S., RA Thurston S., Parkhill J., Willassen N.P., Thomson N.R.; RT "The genome sequence of the fish pathogen Aliivibrio salmonicida strain RT LFI1238 shows extensive evidence of gene decay"; RL BMC Genomics 9:616-616(2008). XX DR ENA; ERS000076. DR GR; FM178379_GR. DR RFAM; RF00001; 5S_rRNA. DR RFAM; RF00005; tRNA. DR RFAM; RF00010; RNaseP_bact_a. DR RFAM; RF00013; 6S. DR RFAM; RF00018; CsrB. DR RFAM; RF00021; Spot_42. DR RFAM; RF00023; tmRNA. DR RFAM; RF00057; RyhB. DR RFAM; RF00059; TPP. DR RFAM; RF00101; SraC_RyeA. DR RFAM; RF00111; RyeB. DR RFAM; RF00114; S15. DR RFAM; RF00127; t44. DR RFAM; RF00140; Alpha_RBS. DR RFAM; RF00168; Lysine. DR RFAM; RF00169; Bacteria_small_SRP. DR RFAM; RF00174; Cobalamin. DR RFAM; RF00177; SSU_rRNA_bacteria. DR RFAM; RF00240; RNA-OUT. DR RFAM; RF00378; Qrr. DR RFAM; RF00504; Glycine. DR RFAM; RF00506; Thr_leader. DR RFAM; RF00514; His_leader. DR RFAM; RF00630; P26. DR RFAM; RF01051; GEMM_RNA_motif. DR RFAM; RF01055; MOCO_RNA_motif. DR RFAM; RF01086; LR-PK1. DR RFAM; RF01118; PK-G12rRNA. DR RFAM; RF01770; rimP. DR RFAM; RF01794; sok. DR RFAM; RF01854; Bacteria_large_SRP. DR RFAM; RF02001; group-II-D1D4-3. DR SILVA-LSU; FM178379. DR SILVA-SSU; FM178379. DR StrainInfo; 379913; 0. XX FH Key Location/Qualifiers FH FT source 1..3325165 FT /organism="Aliivibrio salmonicida LFI1238" FT /chromosome="1" FT /strain="LFI1238" FT /mol_type="genomic DNA" FT /country="Norway:Hammerfest" FT /isolation_source="Atlantic cod" FT /db_xref="taxon:316275" FT CDS complement(312..746) FT /transl_table=11 FT /gene="mioC" FT /locus_tag="VSAL_I0001" FT /old_locus_tag="TVS3117" FT /product="MioC protein" FT /note="Similar to Escherichia coli Protein MioC FT UniProt:P03817 (146 aa) fasta scores: E()=2.7e-20, 45.985% FT id in 137 aa. Shown to be important for the modulation of FT initiation at oriC in a minichromosome model (its true role FT in chromosome replication in E. coli is equivocal)" FT /db_xref="GOA:B6EP38" FT /db_xref="InterPro:IPR008254" FT /db_xref="UniProtKB/TrEMBL:B6EP38" FT /inference="similar to sequence:UniProt:P03817" FT /protein_id="CAQ77686.1" FT /translation="MKNASIITGSTLGAAEYVGDHIADLLEEMDFATDIHNQPILSEID FT TKGLWILVVSTHGAGDYPDNIKPFIQELEEGSQDLSDVEFAIIAIGDSNYDTFCAAGKS FT LQKVLHNRNVKEIFPLLEIDVTQNPIPEEPAELWLKQHIC" FT misc_feature complement(333..731) FT /gene="mioC" FT /locus_tag="VSAL_I0001" FT /note="HMMPfam hit to PF00258, Flavodoxin, score 1.8e-24" FT /inference="protein motif:HMMPfam:PF00258" FT CDS complement(811..2178) FT /transl_table=11 FT /gene="trmE" FT /locus_tag="VSAL_I0002" FT /old_locus_tag="TVS3118" FT /product="probable tRNA modification GTPase" FT /db_xref="GOA:B6EP39" FT /db_xref="InterPro:IPR004520" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR018948" FT /db_xref="UniProtKB/TrEMBL:B6EP39" FT /protein_id="CAQ77687.1" FT /translation="MTLHTDTIVAQATAPGRGGVGIIRVSGPKAQQVALEVVGKTLKPR FT YAEYTPFKDDNGLELDQGIALYFPNPHSFTGEDVLELQGHGGPVVMDMLIKRILKIEGI FT RTARPGEFSERAFLNDKMDLAQAEAIADLIDASSEEAAKSALNSLQGVFSRKINTLVES FT LIYLRIYVEAAIDFPEEEIDFLADGKVSGDLQGIIDNLNAVRQEANQGAIMREGMKVVI FT AGRPNAGKSSLLNALSGKDSAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDE FT VERIGIERAWQEIAQADRVLFMVDGTTTDATDPKVIWPEFLDRLPKNMGMTVIRNKADQ FT TGENLGICHVNDPTLIRLSAKTGEGVDALRLHLKECMGFSGNQEGGFMARRRHLEALEK FT ASEHLDIGQQQLEGYMAGEILAEELRIAQQHLSEITGEFSSDDLLGRIFTSFCIGK" FT misc_feature complement(1162..1527) FT /gene="trmE" FT /locus_tag="VSAL_I0002" FT /note="HMMPfam hit to PF01926, GTPase of unknown FT function,score 6.3e-41" FT /inference="protein motif:HMMPfam:PF01926" FT misc_feature complement(1486..1509) FT /gene="trmE" FT /locus_tag="VSAL_I0002" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(2056..2079) FT /gene="trmE" FT /locus_tag="VSAL_I0002" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(2277..3902) FT /transl_table=11 FT /gene="oxaA" FT /locus_tag="VSAL_I0003" FT /old_locus_tag="TVS3119" FT /product="inner membrane protein" FT /db_xref="GOA:B6EP40" FT /db_xref="InterPro:IPR001708" FT /db_xref="InterPro:IPR019998" FT /db_xref="UniProtKB/Swiss-Prot:B6EP40" FT /protein_id="CAQ77688.1" FT /translation="MDTQRNILLLALALVSFLLFQQWQVETNPQQPATVSTVQQTHKNG FT DVPTSSTANSDAPVDSAQSDKLITITTDVLTLKVDTLGGDIIESVLNKYDAELDSKAKF FT VLLKNDADHSYIAQSGLIGPQGIDSNTGRAQFTAKKTDYVLADGQNELRIPLTLEKNGI FT TYTKTLIVKRDSYAIDVEYTVNNQSSAPATVEMYANLKQNLLDDGGSLTMPTYRGGAYS FT TEDTRYKKYSFDDMEDKNLSIDMTNGQGWAGMLQHYFASAWIPRNVNDATLTTRVAGDY FT GYIGVRMPSVTIPAGQEDTLTATLWTGPKLQPQMAATAKYLDLSVDYGWLWFIASPLHK FT LLSFIQSIVGNWGLAIMILTFIVRGAMYPLTKAQYTSMAKMRMLQPKLAAMRERIGDDR FT QRMSQEMMELYKKEKVNPLGGCLPIVLQMPIFISLYWALMESVELRHAPFFGWITDLSA FT QDPYYILPLLMGASMFLIQKMSPTTVTDPMQQKIMTFIPVMFTVFFLWFPAGLVLYWLV FT SNVVTLIQQTLIYRALEKKGLHSK" FT misc_feature complement(2301..2855) FT /gene="oxaA" FT /locus_tag="VSAL_I0003" FT /note="HMMPfam hit to PF02096, 60Kd inner membrane protein, FT score 8.2e-121" FT /inference="protein motif:HMMPfam:PF02096" FT misc_feature complement(order(2352..2420,2478..2531,2589..2657, FT 2814..2882,3828..3884)) FT /gene="oxaA" FT /locus_tag="VSAL_I0003" FT sig_peptide complement(3840..3902) FT /gene="oxaA" FT /locus_tag="VSAL_I0003" FT CDS complement(4129..4482) FT /transl_table=11 FT /gene="rnpA" FT /locus_tag="VSAL_I0004" FT /old_locus_tag="TVS3120" FT /product="ribonuclease P protein component (RNase P FT protein)" FT /EC_number="3.1.26.5" FT /db_xref="GOA:B6EP41" FT /db_xref="InterPro:IPR000100" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020539" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:B6EP41" FT /protein_id="CAQ77689.1" FT /translation="MNYDFSRELRLLTPEDYKSVFKQAHRAGSPHFTILARENSLSHPR FT LGLAVPKKQIKTAVGRNKFKRITRESFRNKQHSLPAKDFVVIAKKSAQELSNEDFNKLL FT DKLWHRLSRPSRG" FT misc_feature complement(4147..4470) FT /gene="rnpA" FT /locus_tag="VSAL_I0004" FT /note="HMMPfam hit to PF00825, Ribonuclease P, score FT 6.8e-40" FT /inference="protein motif:HMMPfam:PF00825" FT misc_feature complement(4276..4320) FT /gene="rnpA" FT /locus_tag="VSAL_I0004" FT /note="PS00648 Bacterial ribonuclease P protein component FT signature." FT /inference="protein motif:ProSite:PS00648" FT CDS complement(4499..4633) FT /transl_table=11 FT /gene="rpmH" FT /locus_tag="VSAL_I0005" FT /old_locus_tag="TVS3121" FT /product="50S ribosomal protein L34" FT /db_xref="GOA:B6EP42" FT /db_xref="InterPro:IPR000271" FT /db_xref="InterPro:IPR020939" FT /db_xref="UniProtKB/Swiss-Prot:B6EP42" FT /protein_id="CAQ77690.1" FT /translation="MKRTFQPSVLKRKRSHGFRARMATKNGRNTINARRAKGRKRLSK" FT misc_feature complement(4502..4633) FT /gene="rpmH" FT /locus_tag="VSAL_I0005" FT /note="HMMPfam hit to PF00468, Ribosomal protein L34,score FT 9.9e-19" FT /inference="protein motif:HMMPfam:PF00468" FT misc_feature complement(4571..4630) FT /gene="rpmH" FT /locus_tag="VSAL_I0005" FT /note="PS00784 Ribosomal protein L34 signature." FT /inference="protein motif:ProSite:PS00784" FT CDS complement(4820..5557) FT /transl_table=11 FT /locus_tag="VSAL_I0006" FT /old_locus_tag="TVS3122" FT /product="putative amino-acid ABC transporter ATP-binding FT protein" FT /db_xref="GOA:B6EP43" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EP43" FT /protein_id="CAQ77691.1" FT /translation="MIKITNLHKSFGTTEVLSGIDLTINKGEIIAIIGSSGTGKSTLLR FT CINFLETADQGTITIDDVSVNTEKYTKTEVLALRRKTGFIFQNYALFAHLTARQNIAEG FT LITVHKWNKADALKRSQQILDDIGLGDKGDSYPAALSGGQQQRVGIGRAMALETELLLF FT DEPTSALDPEWVNEVLTLMKKLATQHQTMLVVTHEMQFAKEVADRVIYMADGKIVEQGT FT PEQIFGYPQDLKLKKFLNQVGIA" FT misc_feature complement(4913..5479) FT /locus_tag="VSAL_I0006" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.5e-62" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(5097..5140) FT /locus_tag="VSAL_I0006" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(5435..5458) FT /locus_tag="VSAL_I0006" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(5554..6225) FT /transl_table=11 FT /locus_tag="VSAL_I0007" FT /old_locus_tag="TVS3123" FT /product="putative amino-acid ABC transporter, permease FT protein" FT /db_xref="GOA:B6EP44" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:B6EP44" FT /protein_id="CAQ77692.1" FT /translation="MGFDFAYMIELLPILFKYLGTTLEMAVWGLFFALALALVLANLRV FT FKVPVLDQLSQLYISFFRGTPLLVQLFLLYYGLPQVFPIFVGLDAFSAAVIGLTLHFAA FT YMAESIRAAIIGVDRSQMEASLSIGMTTSQAMRRIILPQATRIALPSLMNYFIDMIKST FT SLAFTLGVSEIMAKAQMEASSSFKFFEAFLAVALIYWGVVIILTQVQTWAEKKLNKAYV FT R" FT misc_feature complement(5569..6183) FT /locus_tag="VSAL_I0007" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 5.5e-19" FT /inference="protein motif:HMMPfam:PF00528" FT misc_feature complement(order(5596..5664,5914..5982,5992..6051, FT 6088..6156)) FT /locus_tag="VSAL_I0007" FT misc_feature complement(5800..5886) FT /locus_tag="VSAL_I0007" FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT CDS complement(6380..7132) FT /transl_table=11 FT /locus_tag="VSAL_I0008" FT /old_locus_tag="TVS3124" FT /product="putative amino acid ABC FT transporter,substrate-binding protein" FT /note="Similar to Escherichia coli Cystine-binding FT periplasmic protein precursor FliY UniProt:P0AEM9 (266 aa) FT fasta scores: E()=6.8e-24, 40.969% id in 227 aa" FT /db_xref="GOA:B6EP45" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:B6EP45" FT /inference="similar to sequence:UniProt:P0AEM9" FT /protein_id="CAQ77693.1" FT /translation="MKWTKQILTGLALTLAATQFAQAATEVKVGMSGRYFPFTFVKLDK FT LQGFEVDLWDEIGRRNDYKIEYVTASFSGLFGLLETGRIDTISNQITKTEAREAKYLFA FT DPYVVDGAQITVRKGNESIKGIEDLAGKTVAVDLGSNFEKLLRDNDKSNQIDIKTYDTG FT IEHDVALGRSDAFVMDRLSAAQLIKKSGLPLQLAGEPFETIENAWPFVKNEKGQKLQQE FT VNKALSEMRTDGTLAEISQKWFDADVTK" FT misc_feature complement(6395..7054) FT /locus_tag="VSAL_I0008" FT /note="HMMPfam hit to PF00497, Bacterial extracellular FT solute-binding prot, score 1.6e-75" FT /inference="protein motif:HMMPfam:PF00497" FT misc_feature complement(6950..6991) FT /locus_tag="VSAL_I0008" FT /note="PS01039 Bacterial extracellular solute-binding FT proteins, family 3 signature." FT /inference="protein motif:ProSite:PS01039" FT sig_peptide complement(7064..7132) FT /locus_tag="VSAL_I0008" FT CDS 7427..8833 FT /transl_table=11 FT /gene="dnaA" FT /locus_tag="VSAL_I0009" FT /old_locus_tag="TVS3125" FT /product="chromosomal replication initiator protein DnaA" FT /db_xref="GOA:B6EP46" FT /db_xref="InterPro:IPR001957" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010921" FT /db_xref="InterPro:IPR013159" FT /db_xref="InterPro:IPR013317" FT /db_xref="InterPro:IPR018312" FT /db_xref="InterPro:IPR020591" FT /db_xref="UniProtKB/Swiss-Prot:B6EP46" FT /protein_id="CAQ77694.1" FT /translation="MSSSLWLQCLQRLQEELPSAEFSMWVRPLQAELNDNTLTLFAPNR FT FVLDWVRDKYLNSINSLLNEFCGGDIPTLRFEVGSKPISAPPRPQRTAADVAAATSAPA FT QMQARQSLHKPWESRGPEPVDDLNHRSNVNPKHKFTNFVEGKSNQLGLAAARQVSDNPG FT TAYNPLFLYGGTGLGKTHLLQAVGNAILERKPNAKVVYMHSERFVQDMVKALQNNAIEE FT FKCYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVED FT RLKSRFGWGLTVAIEPPELETRVAILMKKAEDHQIHLADEVAFFIAKRLRSNVRELEGA FT LNRVVANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADLLSKR FT RSRSVARPRQLAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKED FT YSNLIRTLSS" FT misc_feature 7823..8479 FT /gene="dnaA" FT /locus_tag="VSAL_I0009" FT /note="HMMPfam hit to PF00308, Bacterial dnaA protein,score FT 1.4e-145" FT /inference="protein motif:HMMPfam:PF00308" FT misc_feature 7943..7966 FT /gene="dnaA" FT /locus_tag="VSAL_I0009" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 8552..8761 FT /gene="dnaA" FT /locus_tag="VSAL_I0009" FT /note="HMMPfam hit to PF08299, Bacterial dnaA protein FT helix-turn-helix, score 2.9e-48" FT /inference="protein motif:HMMPfam:PF08299" FT misc_feature 8702..8761 FT /gene="dnaA" FT /locus_tag="VSAL_I0009" FT /note="PS01008 DnaA protein signature." FT /inference="protein motif:ProSite:PS01008" FT CDS 8866..9975 FT /transl_table=11 FT /gene="dnaN" FT /locus_tag="VSAL_I0010" FT /old_locus_tag="TVS3126" FT /product="DNA polymerase III subunit beta-subunit" FT /EC_number="2.7.7.7" FT /note="Similar to Escherichia coli DNA polymerase III FT subunit beta-subunit DnaN UniProt:P0A988 (366 aa) fasta FT scores: E()=8.7e-95, 65.854% id in 369 aa" FT /db_xref="GOA:B6EP47" FT /db_xref="InterPro:IPR001001" FT /db_xref="InterPro:IPR022634" FT /db_xref="InterPro:IPR022635" FT /db_xref="InterPro:IPR022637" FT /db_xref="InterPro:IPR024693" FT /db_xref="UniProtKB/TrEMBL:B6EP47" FT /inference="similar to sequence:UniProt:P0A988" FT /protein_id="CAQ77695.1" FT /translation="MKFSIERSHLLKPLQQVSGALGGRPSLPIFGNILLQVENGQLSMT FT ATDLEVELISNILLEGDFEAGAITVPSRKFLDICRGLPDGANITIVLEGDRVLVRSGRS FT RFTLATLPAQDFPNIEGWQSEVEITLSQAQLRKLIESTQFSMANQDVRYYLNGMMFETQ FT GTIFRSVATDGHRMAVCNMPVESELPEQQVIMPRKGIQELVRLLDSPEQSVTLQFGNSN FT VRAEVNNFIFTSKLVDGRFPDYRRVMPQSSNKTLEADCDELRQAFARAAILSNEKFRGV FT RVNLANNQMRITANNPEQEEAEEILDVDFQGEDIEIGFNVSYVLDVLDVLNTLKCERVR FT ISMTTANASALVEDCANDEAQYVVMPIRL" FT misc_feature 8866..9225 FT /gene="dnaN" FT /locus_tag="VSAL_I0010" FT /note="HMMPfam hit to PF00712, DNA polymerase III beta FT subunit, N-te, score 4e-57" FT /inference="protein motif:HMMPfam:PF00712" FT misc_feature 8875..9219 FT /gene="dnaN" FT /locus_tag="VSAL_I0010" FT /note="HMMPfam hit to PF02767, DNA polymerase III beta FT subunit, cent, score 0.00024" FT /inference="protein motif:HMMPfam:PF02767" FT misc_feature order(9250..9348,9349..9594) FT /gene="dnaN" FT /locus_tag="VSAL_I0010" FT /note="HMMPfam hit to PF02767, DNA polymerase III beta FT subunit, cent, score 3.3e-54" FT /inference="protein motif:HMMPfam:PF02767" FT misc_feature 9597..9968 FT /gene="dnaN" FT /locus_tag="VSAL_I0010" FT /note="HMMPfam hit to PF02768, DNA polymerase III beta FT subunit, C-te, score 1.2e-52" FT /inference="protein motif:HMMPfam:PF02768" FT CDS 9989..11068 FT /transl_table=11 FT /gene="recF" FT /locus_tag="VSAL_I0011" FT /old_locus_tag="TVS3128" FT /product="DNA replication and repair protein RecF" FT /db_xref="GOA:B6EP48" FT /db_xref="InterPro:IPR001238" FT /db_xref="InterPro:IPR003395" FT /db_xref="InterPro:IPR018078" FT /db_xref="UniProtKB/Swiss-Prot:B6EP48" FT /protein_id="CAQ77696.1" FT /translation="MPLSRLIINDFRNIETCDIQLSTGFNFVIGPNGSGKTSVLEAIYL FT LGHGRSFKSSLTGRIIRNSCDELFIHGRFTTPEQFELPIGINKQRDGTTEVKIGGESGQ FT KLAQLAKVLPLQLIHPEGFELVTDGPKFRRAFIDWGVFHVEPAFYEAWSRVKRLTKQRN FT ALLKTAQSYRELSYWDLELANLAEKIDQWRVDYINHISEATQQICQAFLPEYDIKLSYY FT RGWERETPYAELLKRNFERDKQLGYTVGGPNKADLRIKVAGTPVEDVLSRGQLKLMVCA FT LRLAQGQHLTEATGKQCIYLIDDFASELDSHRRQLLAQYLKQTKAQVFISSITAEQIAD FT MHDEESKMFEIEHGKIAQG" FT misc_feature 9992..11059 FT /gene="recF" FT /locus_tag="VSAL_I0011" FT /note="HMMPfam hit to PF02463, RecF/RecN/SMC N terminal FT domain, score 1.3e-38" FT /inference="protein motif:HMMPfam:PF02463" FT misc_feature 10076..10099 FT /gene="recF" FT /locus_tag="VSAL_I0011" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 10886..10939 FT /gene="recF" FT /locus_tag="VSAL_I0011" FT /note="PS00618 RecF protein signature 2." FT /inference="protein motif:ProSite:PS00618" FT CDS 11086..13503 FT /transl_table=11 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /old_locus_tag="TVS3129" FT /product="DNA gyrase subunit B" FT /EC_number="5.99.1.3" FT /db_xref="GOA:B6EP49" FT /db_xref="InterPro:IPR001241" FT /db_xref="InterPro:IPR002288" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR011557" FT /db_xref="InterPro:IPR013506" FT /db_xref="InterPro:IPR013759" FT /db_xref="InterPro:IPR013760" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR018522" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:B6EP49" FT /protein_id="CAQ77697.1" FT /translation="MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVD FT NSIDEALAGHCSDIIVTIHEDDSVSVSDDGRGIPTEIHEEEGVSAAEVIMTVLHAGGKF FT DDNSYKVSGGLHGVGVSVVNALSEKVELTINRRGEIFQQIYCHGVPQAPLAVIGTTDTT FT GTKIRFWPSDQTFANIEFVYDILAKRLRELSFLNSGVSIRLQDMREEDKSDHFMFEGGI FT KAFVTHLNRNKTPVHQKIFYFDSERKEDGIVVEVAMQWNDSYQENIFCYTNNIPQRDGG FT AHLSGFRSALTRTLNSFMDKEGFSKKAKSSASGDDAREGLTAVVSVKVPDPKFSSQTKD FT KLVSSEVKSAVESAMNEKLAEFLAENPGEAKMVCSKIIDAARAREAARKAREMTRRKGA FT LDIAGLPGKLADCQEKDPAQSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKA FT RFDKMISSQEVGTLITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFY FT RQMPELIERGYIYIAQPPLYKVKKGKQEQYIKDEEAMAEYQITQALDNASLFVNPHESI FT FGQELENLIRKFNSVMKLLDRMSRRYPLPLLNRLVYTSRLTQDECENEATVQAWTEALV FT IALNEHETGASQYTAALQFNEELNIHQPKLVVRTHGVQHEYVLSADLLNSKEYGRIAEL FT SESLNGLIEEGAYVQRGERKLATETLDEAIAWLIKDSRRGVYLQRYKGLGEMNPEQLWE FT TTMDPDSRRMMQVTINDAVSADELFTTLMGDHVEPRRNFIEENALRVANLDV" FT misc_feature 11176..11607 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and H, score 6.7e-31" FT /inference="protein motif:HMMPfam:PF02518" FT misc_feature 11746..12264 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /note="HMMPfam hit to PF00204, DNA gyrase B, score 2.4e-92" FT /inference="protein motif:HMMPfam:PF00204" FT misc_feature 12343..12681 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /note="HMMPfam hit to PF01751, Toprim domain, score FT 2.1e-06" FT /inference="protein motif:HMMPfam:PF01751" FT misc_feature 12355..12381 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /note="PS00177 DNA topoisomerase II signature." FT /inference="protein motif:ProSite:PS00177" FT misc_feature 13270..13467 FT /gene="gyrB" FT /locus_tag="VSAL_I0012" FT /note="HMMPfam hit to PF00986, DNA gyrase B FT subunit,carboxyl terminus, score 4.7e-45" FT /inference="protein motif:HMMPfam:PF00986" FT repeat_region complement(order(13718..13882,15328..17034)) FT /note="VSa2" FT repeat_region complement(13718..13741) FT /note="IR of VSa2" FT CDS complement(join(13734..13880,15330..16223)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0013" FT /old_locus_tag="TVS3133" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=2.3e-66, 54.1% id in 296 aa. CDS is FT disrupted by the insertion of an IS element" FT /db_xref="PSEUDO:CAQ77698.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT repeat_region complement(13883..15327) FT /note="VSa9" FT CDS complement(14049..15239) FT /transl_table=11 FT /locus_tag="VSAL_I0014" FT /old_locus_tag="TVS3131" FT /product="transposase" FT /db_xref="GOA:B6EHE4" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EHE4" FT /protein_id="CAQ77699.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHLS FT VTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDWS FT RFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLDH FT RTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIEA FT EPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT misc_feature complement(order(15269..15413,15409..15899)) FT /locus_tag="VSAL_I0013" FT /note="HMMPfam hit to PF03050, Transposase IS66 FT family,score 1.4e-30" FT /inference="protein motif:HMMPfam:PF03050" FT CDS complement(16295..16642) FT /transl_table=11 FT /locus_tag="VSAL_I0015" FT /old_locus_tag="TVSb0112" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77700.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS complement(16639..16953) FT /transl_table=11 FT /locus_tag="VSAL_I0016" FT /old_locus_tag="TVS3135" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77701.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT repeat_region complement(17011..17034) FT /note="IR of VSa2" FT CDS complement(17172..18809) FT /transl_table=11 FT /gene="groL1" FT /locus_tag="VSAL_I0017" FT /old_locus_tag="TVS3136" FT /product="60 kda chaperonin 1" FT /db_xref="GOA:B6ENX0" FT /db_xref="InterPro:IPR001844" FT /db_xref="InterPro:IPR002423" FT /db_xref="InterPro:IPR018370" FT /db_xref="UniProtKB/TrEMBL:B6ENX0" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ77702.1" FT /translation="MAAKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFG FT APTITKDGVSVAREIELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIIAEGL FT KAVAAGMNPMDLKRGIDKAVIAAVEALKDLSVPCADTKAIAQVGTISANSDYTVGNLIA FT EAMEKVGRDGVITVEEGQSLQDELDVVEGMQFDRGYLSPYFVNNQEAGSVDLDSPFILL FT VDKKVSNIRELLPTLEAVAKASRPLLIIAEDIEGEALATLVVNNMRGIVKVAAVKAPGF FT GDRRKAMLQDIAALTAGSVISEEIGLELEKVVLEDLGQAKRVTITKETTTIIDGAGDET FT IISGRVSQIRQQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDA FT LHATRAAVEEGVVAGGGVALIRAASKVVNLEGDNEEQTVGIRLALRAMEAPLRQIVKNA FT GEEDSVVANNVRAGEDNYGYNAATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITT FT EAMITDKPQDSSSSMPDMGGMGGMGGMM" FT misc_feature complement(17235..18743) FT /gene="groL1" FT /locus_tag="VSAL_I0017" FT /note="HMMPfam hit to PF00118, TCP-1/cpn60 chaperonin FT family, score 9.5e-194" FT /inference="protein motif:HMMPfam:PF00118" FT misc_feature complement(17562..17597) FT /gene="groL1" FT /locus_tag="VSAL_I0017" FT /note="PS00296 Chaperonins cpn60 signature." FT /inference="protein motif:ProSite:PS00296" FT misc_feature complement(18141..18173) FT /gene="groL1" FT /locus_tag="VSAL_I0017" FT /note="PS00284 Serpins signature." FT /inference="protein motif:ProSite:PS00284" FT CDS complement(18902..19189) FT /transl_table=11 FT /gene="groS1" FT /locus_tag="VSAL_I0018" FT /old_locus_tag="TVS3137" FT /product="10 kDa chaperonin 1" FT /db_xref="GOA:B6ENX1" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR018369" FT /db_xref="InterPro:IPR020818" FT /db_xref="UniProtKB/Swiss-Prot:B6ENX1" FT /protein_id="CAQ77703.1" FT /translation="MNIRPLHDRVIVERQESESKSAGGIVLTGSAAEKSTRGIILAVGN FT GRILENGSVQPLDVKVGDSVIFAEGNIKAEKIDGKEVLIMSEYNILAIVE" FT misc_feature complement(18908..19186) FT /gene="groS1" FT /locus_tag="VSAL_I0018" FT /note="HMMPfam hit to PF00166, Chaperonin 10 Kd FT subunit,score 3e-36" FT /inference="protein motif:HMMPfam:PF00166" FT misc_feature complement(19109..19183) FT /gene="groS1" FT /locus_tag="VSAL_I0018" FT /note="PS00681 Chaperonins cpn10 signature." FT /inference="protein motif:ProSite:PS00681" FT repeat_region complement(19550..20988) FT /note="VSa9" FT CDS complement(19716..20909) FT /transl_table=11 FT /locus_tag="VSAL_I0019" FT /old_locus_tag="TVS3138" FT /product="transposase" FT /db_xref="GOA:B6ENX2" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6ENX2" FT /protein_id="CAQ77704.1" FT /translation="MHAYKPLKQLFNSQNNGLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 21269..21523 FT /transl_table=11 FT /locus_tag="VSAL_I0020" FT /old_locus_tag="TVS3139" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENX3" FT /protein_id="CAQ77705.1" FT /translation="MKFSRVKEGEFKRLVETKTITTLIAQESNNEHNKFSLFGIDEKNQ FT LGYAVRHGRVDELRTWRLDILSAFVKSLGFKSIEVYFSK" FT CDS 22530..23489 FT /transl_table=11 FT /locus_tag="VSAL_I0021" FT /old_locus_tag="TVS3141" FT /product="antirestriction protein" FT /db_xref="InterPro:IPR013610" FT /db_xref="InterPro:IPR017113" FT /db_xref="UniProtKB/TrEMBL:B6ENX4" FT /protein_id="CAQ77706.1" FT /translation="MTYSTTINSTITKETEATKARAGYPKNEMVKKRKTTKKRAVVKVS FT KDIYQMVTDRIIAALESGVKPWACPWDRTNECSMLPMNFKTKANYSGVNILLLWSETVM FT KGFTSPYWLTYNQAVELGGNVIKGQKGTPIIYYKNWEKENDDGKTEIIPMLKTFTVFNL FT DQVEGIEKPAVTVAEVREKNEFVTLDHVVEAINATGIKINHCGIRAFYSSAHDEITLPM FT VDRFNSSYDYYATTWHELVHATGHKTRLDRNLKNSFGSKDYAFEELIAELGAEFCCADL FT GIVGEVQHESYIASWLERLNGDKKFIFKAASQARRING" FT misc_feature 22662..23012 FT /locus_tag="VSAL_I0021" FT /note="HMMPfam hit to PF08401, Domain of unknown function FT (DUF1738), score 2.3e-68" FT /inference="protein motif:HMMPfam:PF08401" FT repeat_region complement(23773..25188) FT /note="VSa9" FT CDS complement(23916..25109) FT /transl_table=11 FT /locus_tag="VSAL_I0022" FT /old_locus_tag="TVS3142" FT /product="transposase" FT /db_xref="GOA:B6EGT7" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EGT7" FT /protein_id="CAQ77707.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYDELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 25189..26034 FT /transl_table=11 FT /locus_tag="VSAL_I0023" FT /old_locus_tag="TVS3143" FT /product="metallo-beta-lactamase superfamily protein" FT /db_xref="GOA:B6ENX6" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:B6ENX6" FT /protein_id="CAQ77708.1" FT /translation="MILTSLIDNTRLNNRTDLAIERGLSIHASTMGKSILFDAGSSEAF FT CDNATLLNVDISNVDAAVISHRHHDHCNGVTHFLDRNSKAPVYFRECEETNYLFKTFGF FT KNNVGINKQLLVKGASRLTFVNQMTEISPNIFIITDLSNKYAKSKGNQYLFTESDGCCK FT PDSFDHELLLVVKENDGLIVFTGCAHSGVLNMIDTAISHFPNTKIKAVVGGFHLVGLPL FT FNSIGGTKKQIEEIGESILNYPIDKLYTGHCTGMKAYHILKGVLGDRLEYFPTGRSITI FT " FT misc_feature 25252..25944 FT /locus_tag="VSAL_I0023" FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily, score 3.8e-05" FT /inference="protein motif:HMMPfam:PF00753" FT CDS 26437..26988 FT /transl_table=11 FT /gene="cyaB" FT /locus_tag="VSAL_I0024" FT /old_locus_tag="TVS3144" FT /product="adenylate cyclase" FT /EC_number="4.6.1.1" FT /db_xref="GOA:B6ENX7" FT /db_xref="InterPro:IPR008172" FT /db_xref="InterPro:IPR008173" FT /db_xref="InterPro:IPR023577" FT /db_xref="UniProtKB/TrEMBL:B6ENX7" FT /protein_id="CAQ77709.1" FT /translation="MSEHFEGKFEVELKYRLKSKSQFLTILNSMMYEVMLEDNLESDCY FT FDTPEQVLLAENKSLCIREMEPSGIKLWIVKGPEADHCEATNITDTNKAKSMLNTMGYH FT VVLAMKKTRSIYFVGKFHITIDNLNGLGDFAEFAIMTDDESLLESYRSELIVLASKFGL FT SSTDLEHRSYRKMYSESLTV" FT misc_feature 26458..26973 FT /gene="cyaB" FT /locus_tag="VSAL_I0024" FT /note="HMMPfam hit to PF01928, CYTH domain, score 3.1e-26" FT /inference="protein motif:HMMPfam:PF01928" FT CDS 27382..27747 FT /transl_table=11 FT /locus_tag="VSAL_I0025" FT /old_locus_tag="TVS3145" FT /product="putative exported protein" FT /note="Expression may be regulated by Fur" FT /db_xref="UniProtKB/TrEMBL:B6ENX8" FT /protein_id="CAQ77710.1" FT /translation="MKFISKVIFITCSIAFGCVANESIEPTSILLTYDSSFVLAAIQQD FT RKFLAVENNDEGSLELSGLVTKQYSDYLVDVVVAQERKYNQSSREIKTTILVREDQIGK FT PIVLGSVNNEKFTFTLK" FT sig_peptide 27382..27441 FT /locus_tag="VSAL_I0025" FT misc_feature 27472..27504 FT /locus_tag="VSAL_I0025" FT /note="PS00284 Serpins signature." FT /inference="protein motif:ProSite:PS00284" FT CDS 27776..28180 FT /transl_table=11 FT /locus_tag="VSAL_I0026" FT /old_locus_tag="TVS3146" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENX9" FT /protein_id="CAQ77711.1" FT /translation="MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAV FT GGVRLMVNEADVEMALSIINTDFSEAVINSPETEIIKNCCPNCGSEDLVLFTKGKKPAF FT VVFILLGFPLFFFKHGYKCQGCNEFIQKVE" FT CDS 28436..29215 FT /transl_table=11 FT /locus_tag="VSAL_I0027" FT /old_locus_tag="TVS3147" FT /product="hypothetical protein" FT /note="Similar to Escherichia coli o157:h- Plasmid pSFO157 FT Wb0013. UniProt:Q8VU43 (262 aa) fasta scores: FT E()=2.3e-08,24.254% id in 268 aa" FT /db_xref="InterPro:IPR021352" FT /db_xref="UniProtKB/TrEMBL:B6ENY0" FT /inference="similar to sequence:UniProt:Q8VU43" FT /protein_id="CAQ77712.1" FT /translation="MLLWHYTSVEVLSSILGQAKPTLRATHINYLNDSVELKHGLDAIK FT NILIKTHDPSVNDIVEDINELLDDNYDPHIFSFSLSEAKDSLYQWLAYCPSNGGVSLGF FT EFSDTMVMEDVICVKNAFELPLPNYPSSQIPQYRKCNYFLSEIDIKTDWYRPQNGKTTK FT ANLLTNAMFLKHSAFHFEQEHRLFFHPMPNSQFYVPAKFQGSKPYVDFHFDPKILKYVC FT VSPRGNKDIGVKIVKKILSTYGFNHVEVIVSSIPFRE" FT CDS 29602..30555 FT /transl_table=11 FT /locus_tag="VSAL_I0028" FT /old_locus_tag="TVS3148" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR021139" FT /db_xref="UniProtKB/TrEMBL:B6ENY1" FT /protein_id="CAQ77713.1" FT /translation="MRTRIYIDGYNFYYGCLKGTPYKWLDLVKLFEEHIIPRSDVYNAT FT LHDNVGIKYFTAEITNKAAADPNSVNDQRSYHHALYLHSENLLKTIKGSYAVDKVEYPK FT VEYYEAGIEKEPKDCARVKVWKLEEKQSDVNIAIEAVYDAVMDHTLEQIIFVTNDTDIV FT PALEKIREHNQKSLRSPIKIGLVIPSKENNEYRKPNKSLSNLADWTVKYIKNSELSESQ FT LPCRIAGRKSSAIKPTSWFKYNQKVEEILEILAASDVLKTIPRAWRWLSEPKPEVKDLP FT ILTSTPDQLLDCEKDIEDVLEHVKAFALYMREKNKS" FT repeat_region complement(30791..31828) FT /note="VSa17" FT CDS complement(30807..31769) FT /transl_table=11 FT /locus_tag="VSAL_I0029" FT /old_locus_tag="TVS3149" FT /product="transposase" FT /db_xref="InterPro:IPR006842" FT /db_xref="InterPro:IPR010106" FT /db_xref="UniProtKB/TrEMBL:B6ENY2" FT /protein_id="CAQ77714.1" FT /translation="MSKKNTTTPHDGLFKAFLTTPDTAKDMLEIHLPTHLKTLCDLSTL FT KLESGSFLEDDLRPYYSDVLYSMKTECGDGYIYALIEHQSSPDEHMAFRMFRYAIAAMQ FT KHLDAGNKDLPLVVPLLFYHGKTSPYPYSMNWLDCFTKPEMAKALYNNDFPLVDVTVMD FT DSEIMQHKRIALLELVQKHIYQKDINDILESLAILLLNDYHTDSQVRTLIEYLVTVGET FT QNVNTLLEELAQQVPKHEGTLMTIAEQLILQGEQKGLQQGLQQGRQEGEQKGRQEGRQE FT GRQDTLKEMARNLLLSGVDKDAIMKATGFSSRELELISH" FT misc_feature complement(30876..31766) FT /locus_tag="VSAL_I0029" FT /note="HMMPfam hit to PF04754, Putative FT transposase,YhgA-like, score 1.2e-176" FT /inference="protein motif:HMMPfam:PF04754" FT repeat_region complement(31802..31828) FT /note="IR of VSa17" FT CDS 32166..32456 FT /transl_table=11 FT /locus_tag="VSAL_I0030" FT /old_locus_tag="TVS3150" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENY3" FT /protein_id="CAQ77715.1" FT /translation="MRLTMGTTINSKNLSEQIFNFLRENKKASIRELIELTGESRQRVQ FT STISGLRVKSENSDYKILSRNENIGEVTYEYTPQEKNQFQRCEQLLKSIFC" FT CDS 33193..35412 FT /transl_table=11 FT /locus_tag="VSAL_I0031" FT /old_locus_tag="TVS3151" FT /product="putative cell wall degradation enzyme" FT /db_xref="GOA:B6ENY4" FT /db_xref="InterPro:IPR002477" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR018392" FT /db_xref="InterPro:IPR023346" FT /db_xref="UniProtKB/TrEMBL:B6ENY4" FT /protein_id="CAQ77716.1" FT /translation="MKVDDRKFVNAYYPWNEELAREAKADTPHHEPIKEKLVETAAFEY FT SIEIACTLDELNTYQVGAFFLGKTKEEESISLWTKSQTDKGFSLLTASVKVNEPKSLTR FT EFFISSGYSLTFNDVSPVKKGSGTHAESFVLIKPSIQIYNRLAWPKVGFFYHFINDELE FT NEYPLSGGDKWSFKVTYSKGKTLSSDLLSEHEYAFILLPWKIDNTVISRQHLLYTKEKM FT TQEQLSEINDQWLDESACLINPDEVVTARSDKIVLREKEDNGRITYTVQSGDTLGLIAK FT KQGITYDGLLALNPQITNPDLIQVDDVVTIKDTPPEQESIQFHVCKIKSETGQRETWGE FT IAEQHGMGAKELYDLNADNPMHKDGALALDNELRVKNTAQSEALDVVYRNAQSPEDVSG FT DKWVFSFANVWSVIEKPFSDVAHMFVQDDTALNKNTCVIKVNSIRLHSKILSGSDGLEA FT IAQEKKGAIKKGDKDAPKSNEIKTIQEALLALNFDLGKYGADGDFGSGTEQAVIDFQRE FT FVPTHEVHPEYEMKKSDGVVGNQTLLALDEAVTIEWKYIRKCKLMIDHHFIQLLEGTKK FT EGYVPMPDKSQSGVTIGSGFDLGARNVNDLISMGLPESLVEKFTPYLGLKKYEAVNKLK FT ALPLSLTEADLSVVEATVKKSETDKIIKLFNSSSKVKFECLPANAQTVVASVAYQYGYL FT PRRAEKFWEQAINQDWNGMYDNLMAFGDDFEVRRHKEAKLIKEIL" FT misc_feature 33376..33399 FT /locus_tag="VSAL_I0031" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 33994..34128 FT /locus_tag="VSAL_I0031" FT /note="HMMPfam hit to PF01476, LysM domain, score 1.9e-14" FT /inference="protein motif:HMMPfam:PF01476" FT misc_feature 34618..34839 FT /locus_tag="VSAL_I0031" FT /note="HMMPfam hit to PF01471, Putative peptidoglycan FT binding domain, score 6.9e-08" FT /inference="protein motif:HMMPfam:PF01471" FT CDS 35412..35801 FT /transl_table=11 FT /locus_tag="VSAL_I0032" FT /old_locus_tag="TVS3152" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:B6ENY5" FT /protein_id="CAQ77717.1" FT /translation="MKKLLLLMYVFSCSVSAFPMKDIYNNLDITSFNSSLMPLRKGEER FT TFKDFNKKLPTPIFSEKNILLDDDYWTYSLTVIKASSDNDYYVCFKDKAKMGTYDSQKP FT MIIRKYERYYVAISSSSNVCDDYAK" FT sig_peptide 35412..35462 FT /locus_tag="VSAL_I0032" FT CDS complement(35944..36303) FT /transl_table=11 FT /locus_tag="VSAL_I0033" FT /old_locus_tag="TVS3153" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENY6" FT /protein_id="CAQ77718.1" FT /translation="MDKLFKVVSNGIYEIVDNACNHNTIATPLSQKAFSPLAYMSEMMV FT PNDMPMKMHDFAARCINLIGLSCQIMNTHQSNFKTTDTYLICKSFISNVCDELEMPSNS FT YQRQYWLEQIDNKLL" FT CDS complement(36382..37035) FT /transl_table=11 FT /locus_tag="VSAL_I0034" FT /old_locus_tag="TVS3154" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENY7" FT /protein_id="CAQ77719.1" FT /translation="MPSNYWVAFPNTHIGIEEVKFLEEIATPSEVPAYIYPLNSNMIKI FT MNNRLLSSGLAEMSFSEKQWVVVSTATLLPLESFTELSEAKDFVFKQFPQTKSIRSDCL FT GILSSEPDYTQLPVLTIYDEKIWEDYLLELENKHGFLFSEEYLLGDLLQKLIVEHQAPK FT EIYQEFNDFNAIEKAIDFIKKNQLIGYQCAISVITQFSEKLSRIDSQRSMLEID" FT repeat_region complement(37110..38545) FT /note="VSa9" FT CDS complement(37276..38466) FT /transl_table=11 FT /locus_tag="VSAL_I0035" FT /old_locus_tag="TVS3156" FT /old_locus_tag="TVS3155" FT /product="transposase" FT /db_xref="GOA:B6EMK7" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EMK7" FT /protein_id="CAQ77720.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHLS FT VTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYDELDLSSEECPYIRNKTDWS FT RFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLDH FT RTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIEA FT EPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 38547..39242 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0036" FT /old_locus_tag="TVS3157" FT /product="toxin coregulated pilus biosynthesis protein I FT (Tcp pilus biosynthesis protein TcpI) (fragment)" FT /note="Similar to C-terminal part of Vibrio cholerae Toxin FT coregulated pilus biosynthesis protein I TcpI FT UniProt:P29486 (620 aa) fasta scores: E()=1.4e-24, 46.552% FT id in 232 aa. CDS is truncated by the insertion of the FT upstream IS element and subsequent recombination events" FT /inference="similar to sequence:UniProt:P29486" FT misc_feature 38547..39239 FT /locus_tag="VSAL_I0036" FT /note="HMMPfam hit to PF00015, Methyl-accepting chemotaxis FT protein (MCP) s, score 1.4e-40" FT /inference="protein motif:HMMPfam:PF00015" FT CDS 39505..40020 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0037" FT /old_locus_tag="TVS3158" FT /product="putative exported protein (fragment)" FT /note="Similar to Shewanella frigidimarina ncimb 400 FT Hypothetical protein precursor UniProt:Q3NML9 (287 aa) FT fasta scores: E()=2.8e-36, 56.614% id in 189 aa. CDS is FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:Q3NML9" FT sig_peptide 39505..39570 FT /locus_tag="VSAL_I0037" FT repeat_region 40023..41027 FT /note="VSa6" FT repeat_region 40023..40041 FT /note="IR of VSa6" FT CDS 40119..41000 FT /transl_table=11 FT /locus_tag="VSAL_I0038" FT /old_locus_tag="TVS3159" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ77723.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 40446..40940 FT /locus_tag="VSAL_I0038" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 41009..41027 FT /note="IR of VSa6" FT repeat_region 41228..42253 FT /note="VSa17" FT CDS 41289..42239 FT /transl_table=11 FT /locus_tag="VSAL_I0039" FT /old_locus_tag="TVS3161" FT /product="transposase" FT /db_xref="InterPro:IPR006842" FT /db_xref="InterPro:IPR010106" FT /db_xref="UniProtKB/TrEMBL:B6ENZ0" FT /protein_id="CAQ77724.1" FT /translation="MNKKNTSTPHDGLFKAFLSKPDTAKDMLETHLPAHLQTLCDLSTL FT KLESGTFLEDDLRPYYSDVLYSMKTECGDGYIYALIEHQSSPDEHMAFRMFRYAIAAMQ FT KHLDAGNKELPLVVPLLFYHGKTSPYPYSMNWLDCFTNPDMAKILYSNNFPLVDVTVMD FT DSEIMQHKRIALLELVQKHIYQKDIIEIIKPLAILLSNDYHTDSQIRTLIEYLVTVGES FT QNVSTLLEELAQQVPKHEGVLMTIAEQLIQQGEQKGLLRGEQTGLKKGLEKGLEKGRQD FT TLNEMARNLLQSGVDKDVIMKATGFSSRELELLSH" FT misc_feature 41292..42170 FT /locus_tag="VSAL_I0039" FT /note="HMMPfam hit to PF04754, Putative FT transposase,YhgA-like, score 3.7e-173" FT /inference="protein motif:HMMPfam:PF04754" FT repeat_region 42661..44099 FT /note="VSa9" FT CDS 42740..43933 FT /transl_table=11 FT /locus_tag="VSAL_I0040" FT /old_locus_tag="TVS3162" FT /product="transposase" FT /db_xref="GOA:B6ENZ1" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6ENZ1" FT /protein_id="CAQ77725.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFYALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS complement(44102..44461) FT /pseudo FT /transl_table=11 FT /gene="ilvG" FT /locus_tag="VSAL_I0041" FT /old_locus_tag="TVS3163" FT /product="acetolactate synthase isozyme II large subunit" FT /EC_number="2.2.1.6" FT /note="Similar to Escherichia coli Acetolactate synthase FT isozyme II large subunit IlvG UniProt:P00892 (548 aa) fasta FT scores: E()=9.5e-32, 77.500% id in 120 aa. CDS is truncated FT by the insertion of the downstream IS element and FT subsequent recombination events (fragment)" FT /inference="similar to sequence:UniProt:P00892" FT misc_feature complement(44102..44461) FT /gene="ilvG" FT /locus_tag="VSAL_I0041" FT /note="HMMPfam hit to PF02776, Thiamine pyrophosphate FT enzyme, N-termina, score 8.9e-44" FT /inference="protein motif:HMMPfam:PF02776" FT misc_feature complement(44192..44284) FT /gene="ilvG" FT /locus_tag="VSAL_I0041" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature complement(44261..44326) FT /gene="ilvG" FT /locus_tag="VSAL_I0041" FT /note="Predicted helix-turn-helix motif with score 987.000, FT SD 2.55 at aa 46-67, sequence HEQGAAMAAIGMARSTKSVAVC" FT CDS 44867..46393 FT /transl_table=11 FT /locus_tag="VSAL_I0042" FT /old_locus_tag="TVS3164" FT /product="putative competence protein" FT /db_xref="GOA:B6ENZ2" FT /db_xref="InterPro:IPR000523" FT /db_xref="InterPro:IPR002078" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004482" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:B6ENZ2" FT /protein_id="CAQ77727.1" FT /translation="MGLAIIHSRACVGVEAPEVTVEVHISNGMPGFNLVGLPETTVKEA FT KDRVRSAIINSNFEFPSKKITVNLAPADLPKEGGRFDLPIALGILAASDQIPNHKLKDH FT EFVGELALSGELRRVKGVLPAALASLKANRSLIVPDENGDQAALVGANVHKSAPHLLSV FT CGFLCGQQQLGLFTSPVIEHIDLPLERDLQDIIGQQQGKRALEIAAAGGHNLLYLGPPG FT TGKTMLASRMSDLLPEMTNDEALETAAVASLTHQHINESNWRTRPFRSPHHSSSMAALV FT GGGSIPRPGEISLAHNGILFLDEMPEFERKVLDSLREPLESGEIIISRVASKMRFPARF FT QLVGALNPSPTGYYEGNNTRTNPQLILRYLNRISGPLLDRFDMSLEIPLLPKGTLTEGG FT DRGESSLQVKERVRLARVKMLERSGKINALLSSREVETYCPLEKEDAVFLEDTLYRLGL FT SIRAYHRIIKVARTIADLSGSENIQRIHLGEAVGYRAMDRLLKQLSAQAV" FT misc_feature 45437..46051 FT /locus_tag="VSAL_I0042" FT /note="HMMPfam hit to PF01078, Magnesium chelatase,subunit FT ChlI, score 2.1e-138" FT /inference="protein motif:HMMPfam:PF01078" FT misc_feature 45506..46033 FT /locus_tag="VSAL_I0042" FT /note="HMMPfam hit to PF07728, ATPase family associated FT with various ce, score 3.9e-05" FT /inference="protein motif:HMMPfam:PF07728" FT misc_feature 45521..45544 FT /locus_tag="VSAL_I0042" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 45734..45781 FT /locus_tag="VSAL_I0042" FT /note="PS00676 Sigma-54 interaction domain ATP-binding FT region B signature." FT /inference="protein motif:ProSite:PS00676" FT CDS 46481..47350 FT /transl_table=11 FT /locus_tag="VSAL_I0043" FT /old_locus_tag="TVS3165" FT /product="putative acyltransferase" FT /note="Similar to Escherichia coli Probable acyltransferase FT YihG UniProt:P32129 (310 aa) fasta scores: E()=5.3e-48, FT 42.612% id in 291 aa" FT /db_xref="GOA:B6ENZ3" FT /db_xref="InterPro:IPR002123" FT /db_xref="UniProtKB/TrEMBL:B6ENZ3" FT /inference="similar to sequence:UniProt:P32129" FT /protein_id="CAQ77728.1" FT /translation="MKIFMFANIRLVISTLLVILNTALTSFIISFFAVIKFILPFPFVK FT KLMVSMANKTLWCWATLNLWMLNINNTIDWVVDGGETLSQEKWYLLLSNHVSWADIVIL FT SSVMKDKVPMTKFFLKYELLYVPFVGLACWGADMPFMRRNPERKDDDFKAIQKSCENFR FT SVPTTVVNFVEGTRATPDKLKEARTPYQHLFKPKIGGVAFTLSAMGELFDGIVDVTLAY FT PENQDSPFIDMLQGKLTKVVVRIKLHANDEKVNGDYFEDKVFRRGFHQWINELWKEKDE FT YLQRILKR" FT sig_peptide 46481..46636 FT /locus_tag="VSAL_I0043" FT misc_feature 46517..46585 FT /locus_tag="VSAL_I0043" FT misc_feature 46700..47107 FT /locus_tag="VSAL_I0043" FT /note="HMMPfam hit to PF01553, Acyltransferase, score FT 7.9e-18" FT /inference="protein motif:HMMPfam:PF01553" FT CDS complement(47417..48040) FT /transl_table=11 FT /gene="dsbA" FT /locus_tag="VSAL_I0044" FT /old_locus_tag="TVS3166" FT /product="thiol/disulfide interchange protein DsbA FT precursor" FT /db_xref="GOA:B6ENZ4" FT /db_xref="InterPro:IPR001853" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR023205" FT /db_xref="UniProtKB/TrEMBL:B6ENZ4" FT /experiment="The expressed protein is found to be exported FT (extracellular) by Aliivibrio salmonicida" FT /protein_id="CAQ77729.1" FT /translation="MDWRKLNMMKTMMALFGALVLSFSVNAANFTEGDYYKVLNLPESK FT TPTVNEFFSFYCPHCNSFEPLIQGLKKTLPENATFKKTHVSFMGGKMGLSMSKAYATMV FT SLGIEDKMVPVMFNRIHSMQKPPRNDKELRQIFLDEGVNADEFDGTYNSFAINSMVNRF FT DKSFQDSGLTGVPALMVNNKYLVETSKIKSTEEYYELVNWLLKK" FT misc_feature complement(47444..47899) FT /gene="dsbA" FT /locus_tag="VSAL_I0044" FT /note="HMMPfam hit to PF01323, DSBA-like thioredoxin FT domain, score 4.6e-30" FT /inference="protein motif:HMMPfam:PF01323" FT misc_feature complement(47948..48007) FT /gene="dsbA" FT /locus_tag="VSAL_I0044" FT sig_peptide complement(47960..48040) FT /gene="dsbA" FT /locus_tag="VSAL_I0044" FT CDS complement(48066..49049) FT /transl_table=11 FT /gene="rdoA" FT /locus_tag="VSAL_I0045" FT /old_locus_tag="TVS3167" FT /product="putative phosphotransferase" FT /note="Similar to Escherichia coli Protein RdoA FT UniProt:P0C0K3 (328 aa) fasta scores: E()=1.9e-82, 56.707% FT id in 328 aa" FT /db_xref="GOA:B6ENZ5" FT /db_xref="InterPro:IPR002575" FT /db_xref="InterPro:IPR011009" FT /db_xref="UniProtKB/TrEMBL:B6ENZ5" FT /inference="similar to sequence:UniProt:P0C0K3" FT /protein_id="CAQ77730.1" FT /translation="MSEHAFNFSTLTPDLLWYALADIGVRAESGFLALNSYENRVYQFS FT DEHKRRFVVKFYRPQRWSEAQILEEHLFAKQLVQQDIPVAAPLEINGKTLHFAKGYWFA FT LFDSLGGRTFEVDNFDQLEWVGRFLGRIHKVGEAELFTHRPTVGLDEYLYQPRKLLENS FT SFIPSYLENSFFSDLDLLISRIEQHWQPSKAIRLHGDCHPSNILWRDGPLFVDLDDARN FT GPAAQDMWMLLNGDRQDKLVQLDILVEAYSEYCDFDHNQLKLIEPLRGLRMVHYMAWLA FT KRWQDPAFPIAFPWFSDAKYWESQVLGFKEQIAALNEAPLELMPQW" FT misc_feature complement(48255..48962) FT /gene="rdoA" FT /locus_tag="VSAL_I0045" FT /note="HMMPfam hit to PF01636, Phosphotransferase enzyme FT family, score 5.1e-34" FT /inference="protein motif:HMMPfam:PF01636" FT CDS complement(49108..50526) FT /transl_table=11 FT /locus_tag="VSAL_I0046" FT /old_locus_tag="TVS3168" FT /product="putative ferredoxin" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6ENZ6" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014116" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:B6ENZ6" FT /protein_id="CAQ77731.1" FT /translation="MSQDKIDIKDVTPKQFNPKTHKSSGDRFNPSTGIYVRQSKGTFQQ FT LRRYGGWFLLALFVLTPWISFGDRQAILLDIGSQQFNFFGTTLFPQDLTLLALLFVIAA FT FGLFFITTFLGRVWCGYLCPQTVWTFMYIWFEEKLEGSANKRRKQDQLPMTSSLLLRKT FT LKHCAWIAIAIATGITFIGYFVPVKELVIDFFTLNIDFLPAFWILFFAACTYGNAGWMR FT SIVCLHMCPYARFQSAMFDKDTYIVGYDPKRGESRGPRSRKKDHKALGLGDCIDCNLCV FT QVCPTGIDIRDGLQYECINCGACIDACNETMDKMGYEKNLISYTTEHKLAGHKTHVMRP FT KLIGYGIVMILMIGLFLAQIATVDPMGLDILRDRNQLSRMNNSGLIENTYTLKIINKTQ FT QPQHYQLSVSGIENTTWYGPQNVNVKPGEVLSLPMSLGASSENLTKTITTIVFEIKNDD FT EQVIKTESRFFKPL" FT misc_feature complement(order(49438..49503,49855..49923,49966..50025, FT 50182..50250,50329..50382)) FT /locus_tag="VSAL_I0046" FT misc_feature complement(49657..49728) FT /locus_tag="VSAL_I0046" FT /note="HMMPfam hit to PF00037, 4Fe-4S binding domain,score FT 0.0013" FT /inference="protein motif:HMMPfam:PF00037" FT misc_feature complement(49672..49707) FT /locus_tag="VSAL_I0046" FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS complement(50752..51015) FT /transl_table=11 FT /locus_tag="VSAL_I0047" FT /old_locus_tag="TVS3169" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009383" FT /db_xref="UniProtKB/TrEMBL:B6ENZ7" FT /protein_id="CAQ77732.1" FT /translation="MKCHRVNELIELIHPEWKKEPELNLMQFIVKLAEETKYEGKIEDL FT TDDILIYHLKMRNSKKTDMIPGLAKDHETDFKTAILKARGLL" FT misc_feature complement(50755..51015) FT /locus_tag="VSAL_I0047" FT /note="HMMPfam hit to PF06288, Protein of unknown function FT (DUF1040), score 1.3e-47" FT /inference="protein motif:HMMPfam:PF06288" FT CDS 51533..52318 FT /transl_table=11 FT /locus_tag="VSAL_I0048" FT /old_locus_tag="TVS3170" FT /product="putative sporulation-control protein" FT /db_xref="InterPro:IPR009776" FT /db_xref="UniProtKB/TrEMBL:B6ENZ8" FT /protein_id="CAQ77733.1" FT /translation="MSFLKKTLASLGIGSANVDTIIHHEALIPGQKIKITIDITGGATA FT QSIDNIELKLCCQYKKEVERQGENNSREAIIKQTYVLADWSLPYAFTIKPKQQRQFDID FT LDLPLNTPITIGETKVWVETGLDISLGLDPTDKDPITVRPDELFEGVLSALEGEGLRIR FT QVECEAASGFELPFVQEFEFVPFDGPYHGRWRELEIIAYRDNDKLQLWFEVDRQQKGLS FT GLLSTFIGSNELKRYLEIPSDTPPDIAGQQVIDFLNQTT" FT sig_peptide 51533..51586 FT /locus_tag="VSAL_I0048" FT misc_feature 51542..52213 FT /locus_tag="VSAL_I0048" FT /note="HMMPfam hit to PF07070, SpoOM protein, score FT 5.7e-113" FT /inference="protein motif:HMMPfam:PF07070" FT CDS 52420..53067 FT /transl_table=11 FT /gene="hlyIII" FT /locus_tag="VSAL_I0049" FT /old_locus_tag="TVS3171" FT /product="hemolysin III" FT /db_xref="GOA:B6ENZ9" FT /db_xref="InterPro:IPR004254" FT /db_xref="InterPro:IPR005744" FT /db_xref="UniProtKB/TrEMBL:B6ENZ9" FT /protein_id="CAQ77734.1" FT /translation="MSTTTPYSKKEELANSLSHGLGLVFGVVALILLLVKANAVDADWL FT TIASMSVYGASIILLFLASTLYHSIATPKAKRLLKTLDHCAIFLLIAGSYTPYLLVSLR FT TPLAYWLMAVIWAIALIGIIGKIVFVYRFKKLSLITYLIMGWLSVIAVYQLVIHIDING FT VILLGLGGVIYSLGVIFYVSKKIPYNHAIWHLFVLGGCVTQFLSIYYYVQPV" FT sig_peptide 52420..52536 FT /gene="hlyIII" FT /locus_tag="VSAL_I0049" FT misc_feature 52438..53034 FT /gene="hlyIII" FT /locus_tag="VSAL_I0049" FT /note="HMMPfam hit to PF03006, Haemolysin-III related,score FT 5.2e-58" FT /inference="protein motif:HMMPfam:PF03006" FT misc_feature order(52456..52524,52567..52635,52672..52731,52744..52812, FT 52831..52890,52900..52968,52987..53055) FT /gene="hlyIII" FT /locus_tag="VSAL_I0049" FT repeat_region 53172..53195 FT /note="IR of VSa2" FT repeat_region complement(53198..54636) FT /note="VSa9" FT CDS complement(53364..54557) FT /transl_table=11 FT /locus_tag="VSAL_I0050" FT /old_locus_tag="TVS3175" FT /product="transposase" FT /db_xref="GOA:B6EIP3" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EIP3" FT /protein_id="CAQ77735.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS complement(54711..54920) FT /transl_table=11 FT /gene="cspV" FT /locus_tag="VSAL_I0051" FT /old_locus_tag="TVS3176" FT /product="cold shock protein" FT /db_xref="GOA:B6EP01" FT /db_xref="InterPro:IPR002059" FT /db_xref="InterPro:IPR011129" FT /db_xref="InterPro:IPR012156" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR019844" FT /db_xref="UniProtKB/TrEMBL:B6EP01" FT /protein_id="CAQ77736.1" FT /translation="MSKTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIASEGFKTLK FT EGQKVSFEVEQGQKGPQASNVVGE" FT misc_feature complement(54714..54914) FT /gene="cspV" FT /locus_tag="VSAL_I0051" FT /note="HMMPfam hit to PF00313, 'Cold-shock' DNA-binding FT domain, score 8.9e-40" FT /inference="protein motif:HMMPfam:PF00313" FT misc_feature complement(54813..54872) FT /gene="cspV" FT /locus_tag="VSAL_I0051" FT /note="PS00352 'Cold-shock' DNA-binding domain signature." FT /inference="protein motif:ProSite:PS00352" FT CDS complement(55198..56730) FT /transl_table=11 FT /gene="ilvA" FT /locus_tag="VSAL_I0052" FT /old_locus_tag="TVS3177" FT /product="threonine dehydratase" FT /EC_number="4.3.1.19" FT /db_xref="GOA:B6EP02" FT /db_xref="InterPro:IPR000634" FT /db_xref="InterPro:IPR001721" FT /db_xref="InterPro:IPR001926" FT /db_xref="InterPro:IPR005787" FT /db_xref="UniProtKB/TrEMBL:B6EP02" FT /protein_id="CAQ77737.1" FT /translation="MTTPSYQTGAEYLRQILRAPVYDVATVTQLQDMPRLSERIQNRVQ FT LKREDRQPVHSFKLRGAYNMVSSLTEEQQKAGVIAASAGNHAQGMALSGTKLGIQTTIV FT MPRTTPDIKVEAVKGFGGHVILHGRNFDEAKAEAERLATLHGYTFVPPFDHPLVIAGQG FT TIGMEMLQQNGHLDYIFVPVGGGGLAAGVAVLIKQLMPEIKVIAVEPEDSACLKAALDA FT GEPVVLDQVSMFADGVAVKRIGDETFRLCQQYIDGHITVSSDEICSAVKDIFEDTRAIA FT EPSGALALAGLKKFADQHQLKDKQLSTVLSGANTNFHGLRYVSERCELGEKREGLLAVT FT IPERQGAFFEFCNLIGGRAVTEFNYRYHDDKKANIFVGVRLQDGQEELNNIIHDLQQGD FT YPVVDLSDDEMAKLHIRYMIGGKPLKPLKERLYSFEFPEYPGALVKFLSTLGTHWNISL FT FNYRNHGADYGRVLCGFELRDSDLIDFSKHLEELGYQCKDETNNPAYQFFLS" FT misc_feature complement(55204..55473) FT /gene="ilvA" FT /locus_tag="VSAL_I0052" FT /note="HMMPfam hit to PF00585, C-terminal regulatory domain FT of Threon, score 2.8e-38" FT /inference="protein motif:HMMPfam:PF00585" FT misc_feature complement(55486..55758) FT /gene="ilvA" FT /locus_tag="VSAL_I0052" FT /note="HMMPfam hit to PF00585, C-terminal regulatory domain FT of Threon, score 4.6e-39" FT /inference="protein motif:HMMPfam:PF00585" FT misc_feature complement(55792..56670) FT /gene="ilvA" FT /locus_tag="VSAL_I0052" FT /note="HMMPfam hit to PF00291, Pyridoxal-phosphate FT dependent enzyme, score 4.8e-101" FT /inference="protein motif:HMMPfam:PF00291" FT misc_feature complement(56545..56586) FT /gene="ilvA" FT /locus_tag="VSAL_I0052" FT /note="PS00165 Serine/threonine dehydratases FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00165" FT CDS complement(56735..58207) FT /transl_table=11 FT /gene="ilvD" FT /locus_tag="VSAL_I0053" FT /old_locus_tag="TVS3178" FT /product="dihydroxy-acid dehydratase" FT /EC_number="4.2.1.9" FT /note="The CDS appears to have a deletion of 130 amino acid FT residues after codon 297 in comparison to orthologues" FT /db_xref="GOA:B6EP03" FT /db_xref="InterPro:IPR000581" FT /db_xref="InterPro:IPR015928" FT /db_xref="InterPro:IPR020558" FT /db_xref="UniProtKB/TrEMBL:B6EP03" FT /protein_id="CAQ77738.1" FT /translation="MSTTPKNRYRSATTTHGRNMAGARALWRATGVKEEDFGKPIIAVV FT NSFTQFVPGHVHLKDMGQLVAGEIEKAGGIAKEFNTIAVDDGIAMGHGGMLYSLPSREL FT IADSVEYMVNAHCADAMVCISNCDKITPGMMMAAMRLNIPVIFVSGGPMEAGKTKLSDQ FT IIKLDLVDAMIQGADPTVSDAQSEQIERSACPTCGSCSGMFTANSMNCLTEALGLSQPG FT NGSMLATHADREELFINAGKRIVTLTKRYYEQGDDSALPRNIANKAAFENAMALDIAMG FT GSSNTVLHLIASAQEGGLAVLSGNIAVDGCIVKTAGVDEDNLKFQGPAIVFESQDTAVE FT NILAGEVKAGNVVVIRYEGPKGGPGMQEMLYPTTYLKSMGLGKACALLTDGRFSGGTSG FT LSIGHASPEAASGGTIGLVKTGDIITIDIPNRSITLDVPEAELSERRAEQDKLGWKPVN FT RQREVSFALKAYAMMATSADKGAVRDRSKLEG" FT misc_feature complement(56756..58093) FT /gene="ilvD" FT /locus_tag="VSAL_I0053" FT /note="HMMPfam hit to PF00920, Dehydratase family, score FT 4.3e-259" FT /inference="protein motif:HMMPfam:PF00920" FT misc_feature complement(57017..57052) FT /gene="ilvD" FT /locus_tag="VSAL_I0053" FT /note="PS00887 Dihydroxy-acid and 6-phosphogluconate FT dehydratases signature 2." FT /inference="protein motif:ProSite:PS00887" FT misc_feature complement(57734..57757) FT /gene="ilvD" FT /locus_tag="VSAL_I0053" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(57797..57829) FT /gene="ilvD" FT /locus_tag="VSAL_I0053" FT /note="PS00886 Dihydroxy-acid and 6-phosphogluconate FT dehydratases signature 1." FT /inference="protein motif:ProSite:PS00886" FT CDS complement(58234..58482) FT /transl_table=11 FT /gene="ilvM" FT /locus_tag="VSAL_I0054" FT /old_locus_tag="TVS3179" FT /product="putative acetolactate synthase small regulatory FT subunit" FT /db_xref="UniProtKB/TrEMBL:B6EP04" FT /protein_id="CAQ77739.1" FT /translation="MQQRYILEIKATDKPVLLERVLRVIRHRGFAIKQVLATQNQSDGV FT AAIEIIVESDRPISLLTNQIEKLWDITTVNVATLHRT" FT misc_feature complement(58246..58470) FT /gene="ilvM" FT /locus_tag="VSAL_I0054" FT /note="HMMPfam hit to PF01842, ACT domain, score 0.0058" FT /inference="protein motif:HMMPfam:PF01842" FT CDS complement(58486..59766) FT /pseudo FT /transl_table=11 FT /gene="ilvG" FT /locus_tag="VSAL_I0055" FT /old_locus_tag="TVS3180" FT /product="acetolactate synthase isozyme II large subunit FT (fragment)" FT /EC_number="2.2.1.6" FT /note="Similar to Escherichia coli Acetolactate synthase FT isozyme II large subunit IlvG UniProt:P00892 (548 aa) fasta FT scores: E()=1.5e-100, 62.383% id in 428 aa. CDS is FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:P00892" FT misc_feature complement(58561..59007) FT /gene="ilvG" FT /locus_tag="VSAL_I0055" FT /note="HMMPfam hit to PF02775, Thiamine pyrophosphate FT enzyme, C-termina, score 2.8e-68" FT /inference="protein motif:HMMPfam:PF02775" FT misc_feature complement(58636..58659) FT /gene="ilvG" FT /locus_tag="VSAL_I0055" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(58837..58896) FT /gene="ilvG" FT /locus_tag="VSAL_I0055" FT /note="PS00187 Thiamine pyrophosphate enzymes signature." FT /inference="protein motif:ProSite:PS00187" FT misc_feature complement(59125..59574) FT /gene="ilvG" FT /locus_tag="VSAL_I0055" FT /note="HMMPfam hit to PF00205, Thiamine pyrophosphate FT enzyme, central d, score 8.8e-49" FT /inference="protein motif:HMMPfam:PF00205" FT repeat_region 59768..61206 FT /note="VSa9" FT CDS 59847..61040 FT /transl_table=11 FT /locus_tag="VSAL_I0056" FT /old_locus_tag="TVS3182" FT /product="transposase" FT /db_xref="GOA:B6EIP3" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EIP3" FT /protein_id="CAQ77741.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 61632..62159 FT /transl_table=11 FT /locus_tag="VSAL_I0057" FT /old_locus_tag="TVS3183" FT /product="putative exported protein" FT /note="Expression may be regulated by Fur" FT /db_xref="UniProtKB/TrEMBL:B6EP06" FT /protein_id="CAQ77742.1" FT /translation="MKKNILKISLITIISGCSHSHTIDIYTWVPENQSPKITTEKDINY FT WNKKGYYDGACGWTLSTKISILPPPNSPDYIYGTEQIFEYDLSGKIITQWAAPANSYPI FT AIQDDLMFIDSGLAISTDGQLKQMTFNKQKVVYSSCPENLDIDNSDYLRCAIFSDTLFV FT KDRNIAYQAPCT" FT sig_peptide 61632..61691 FT /locus_tag="VSAL_I0057" FT CDS 62442..63239 FT /transl_table=11 FT /locus_tag="VSAL_I0058" FT /old_locus_tag="TVS3184" FT /product="putative ParA chromosome partitioning protein" FT /note="Similar to Bacillus subtilis Sporulation initiation FT inhibitor protein Soj UniProt:P37522 (253 aa) fasta scores: FT E()=1.6e-13, 32.389% id in 247 aa" FT /db_xref="InterPro:IPR002586" FT /db_xref="UniProtKB/TrEMBL:B6EP07" FT /inference="similar to sequence:UniProt:P37522" FT /protein_id="CAQ77743.1" FT /translation="MGKIIAIGNEKGGVGKTTSVVNLAYYFSHMRNKKVLVVDMDPQCN FT LTDKYFDQNDESKAKPASITRKVGEANVISFFDEEFYGKPVELNPNLHIFGATFNISSL FT NNCTNDEIGFFADNLNTLAEQYDYVFIDTAPSVGNLQYSALIACDGLWIPTTAEEDSFQ FT GVSKILKSVARIKSTYGLDVSVLGMYLNMVKKIPTQLQDHFATKLSEDYGDLVFNTQVI FT HTTRVSEASAFKKSILEYDAKKAKYINIDALMQEFELKSEALS" FT misc_feature 62454..63128 FT /locus_tag="VSAL_I0058" FT /note="HMMPfam hit to PF01656, CobQ/CobB/MinD/ParA FT nucleotide binding domai, score 1.2e-27" FT /inference="protein motif:HMMPfam:PF01656" FT CDS 63236..64210 FT /transl_table=11 FT /locus_tag="VSAL_I0059" FT /old_locus_tag="TVS3185" FT /product="putative chromosome partitioning protein ParB" FT /db_xref="GOA:B6EP08" FT /db_xref="InterPro:IPR003115" FT /db_xref="InterPro:IPR004437" FT /db_xref="InterPro:IPR013741" FT /db_xref="UniProtKB/TrEMBL:B6EP08" FT /protein_id="CAQ77744.1" FT /translation="MSKKKDFKSLMNNKSKSLLDEEINEVKPGESVVLIPKEDIYSSEQ FT IRKFFDEEYILELSKNMDDIGQIQPIVVTHNDIRGYKIQVGECRWRAANLSDKITHVEC FT LVRDAGTVLAQLSENLHRNDLTPFETGRALELLMEEQGIVENKDLANVVSLSEPRISAF FT RKAAQCPPYIELAYHNGIIRDVDTVNSLRIAGELSEVETKKLLESPVSRKEAKDLVKSL FT KASQKELKSAQVDEEQSSLEHQEVANENPSNKADQTKVSGVIPTSQNNGIRISFEGNQG FT FIDLNGQAESGKIVIVLDASSGKLTVPACEVSVIGYHSLEHVH" FT misc_feature 63332..63595 FT /locus_tag="VSAL_I0059" FT /note="HMMPfam hit to PF02195, ParB-like nuclease FT domain,score 1.9e-05" FT /inference="protein motif:HMMPfam:PF02195" FT CDS 64200..64604 FT /transl_table=11 FT /locus_tag="VSAL_I0060" FT /old_locus_tag="TVS3186" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP09" FT /protein_id="CAQ77745.1" FT /translation="MSTNKKKLSRVVNTNRASLIKLYSLHFEDSATQAIEQITIRAINR FT TYVAYRPPPPGEVMKAWVIENRAPQWACRATFDLLIELDWLPNTDIEKAIAARFLFLND FT YPITESWKALLGEWLELAKQAQNENSDEYE" FT CDS 64789..65160 FT /transl_table=11 FT /locus_tag="VSAL_I0061" FT /old_locus_tag="TVS3187" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP10" FT /protein_id="CAQ77746.1" FT /translation="MNFSYEQRIKHLHELSQLPRQSLCFQLLMIMNLCHHDLDSGKVER FT LKSDDETYFYEANSLKEQLLDVPSLSNSHKVLYLLLDAGFIERRVLDKDGQVVIGDSYQ FT RNTAKIYWRISDKGLSVFG" FT CDS complement(65851..66444) FT /transl_table=11 FT /locus_tag="VSAL_I0062" FT /old_locus_tag="TVS3189" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR021316" FT /db_xref="UniProtKB/TrEMBL:B6EP11" FT /protein_id="CAQ77747.1" FT /translation="MPHKEYDKLLLETVDNALLHLYMAVAKATQFMPKKTRNERVVKWL FT KPKLTHSKYKLIKKEIKSFIQIGRHAKGDLERRLIELKSLSERVHHEMDDVSRIYDLLN FT CLYDKHGIHSYLIDDHDTKKNETLYLSKQDIIECFSDDNKQIAPLSAFIVTLKVDEIAK FT MINDTGLMKASIKEFNDETMIAHFQLNTIHCPEA" FT CDS complement(join(67138..67530,67532..68629)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0063" FT /old_locus_tag="TVS3190" FT /product="hypothetical protein (pseudogene)" FT /note="Similar to Photobacterium profundum Hypothetical FT protein SA0089 UniProt:Q6LUB5 (478 aa) fasta scores: FT E()=4.6e-147, 78.319% id in 452 aa. CDS contains a FT frameshift after codon 366. The sequence has been checked FT and is believed to be correct" FT /db_xref="PSEUDO:CAQ77748.1" FT /inference="similar to sequence:UniProt:Q6LUB5" FT misc_feature complement(68519..68572) FT /locus_tag="VSAL_I0063" FT CDS 68814..69041 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0064" FT /old_locus_tag="TVS3192" FT /product="hypothetical protein (fragment)" FT /note="No significant database matches. CDS is probably FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT repeat_region 69042..69804 FT /note="VSa18" FT CDS 69062..69418 FT /transl_table=11 FT /locus_tag="VSAL_I0065" FT /old_locus_tag="TVS3193" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EP13" FT /protein_id="CAQ77750.1" FT /translation="MKMFVDISMIYLHKAPVDFRKGINGLSMIVEQQMVISPFSDALFV FT FCNRQNDKIKVLYWDRNGFCLWQKRLEEDKFTWPKKMTGATVSLTEEQWHWLLNGLDID FT KMQPHKSIHYQSLN" FT misc_feature 69077..69406 FT /locus_tag="VSAL_I0065" FT /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score FT 7.1e-42" FT /inference="protein motif:HMMPfam:PF05717" FT CDS 69494..69790 FT /transl_table=11 FT /locus_tag="VSAL_I0066" FT /old_locus_tag="TVS3194" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EP14" FT /protein_id="CAQ77751.1" FT /translation="MNKKLSHKSNELVLLRALFAEKEAQNNELQLTVDKLNDALKESEA FT RYQSLLEKMQLARHRQFGASSESLPKEDCVFNEAEEVSSDTLLMRILLSIKEH" FT CDS 69805..71031 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0067" FT /old_locus_tag="TVS3195" FT /product="putative hemolysin/hemagglutinin-like protein FT (fragment)" FT /note="Similar to central part of Erwinia chrysanthemi FT Hemolysin/hemagglutinin-like protein HecA UniProt:P94772 FT (3848 aa) fasta scores: E()=3.9e-08, 28.864% id in 440 aa. FT CDS is truncated by the insertion of the upstream and FT downstream IS elements and subsequent recombination events" FT /inference="similar to sequence:UniProt:P94772" FT misc_feature 69847..70014 FT /locus_tag="VSAL_I0067" FT /note="HMMPfam hit to PF05594, Haemagluttinin repeat,score FT 0.36" FT /inference="protein motif:HMMPfam:PF05594" FT misc_feature 70021..70191 FT /locus_tag="VSAL_I0067" FT /note="HMMPfam hit to PF05594, Haemagluttinin repeat,score FT 0.68" FT /inference="protein motif:HMMPfam:PF05594" FT misc_feature 70255..70914 FT /locus_tag="VSAL_I0067" FT /note="HMMPfam hit to PF05594, Haemagluttinin repeat,score FT 3.5" FT /inference="protein motif:HMMPfam:PF05594" FT repeat_region complement(71139..73455) FT /note="VSa2" FT repeat_region complement(71139..71162) FT /note="IR of VSa2" FT CDS complement(join(71155..72354,72354..72644)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0068" FT /old_locus_tag="TVSb0114" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=2.2e-119, 56.7% id in 494 aa. CDS FT contains a frameshift after codon 97" FT /db_xref="PSEUDO:CAQ77753.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT CDS complement(72716..73063) FT /transl_table=11 FT /locus_tag="VSAL_I0069" FT /old_locus_tag="TVSb0115" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77754.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS complement(73060..73374) FT /transl_table=11 FT /locus_tag="VSAL_I0070" FT /old_locus_tag="TVS3199" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77755.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT repeat_region complement(73432..73455) FT /note="IR of VSa2" FT CDS complement(73457..74899) FT /pseudo FT /transl_table=11 FT /gene="trkH" FT /locus_tag="VSAL_I0071" FT /old_locus_tag="TVS3200" FT /product="Trk system potassium uptake protein (fragment)" FT /note="The insertion of the downstream IS element truncates FT the original translational stop codon of the CDS. There is FT an inframe translational stop codon 8 amino acid residues FT further downstream within the IS element. The extended CDS FT may therefore be expressed and functional" FT misc_feature complement(73463..74449) FT /gene="trkH" FT /locus_tag="VSAL_I0071" FT /note="HMMPfam hit to PF02386, Cation transport FT protein,score 1.6e-85" FT /inference="protein motif:HMMPfam:PF02386" FT misc_feature complement(order(73472..73540,73670..73738,73871..73939, FT 74027..74095,74132..74200,74303..74371,74432..74500, FT 74624..74692,74729..74797,74813..74881)) FT /gene="trkH" FT /locus_tag="VSAL_I0071" FT misc_feature complement(73814..73891) FT /gene="trkH" FT /locus_tag="VSAL_I0071" FT /note="PS00217 Sugar transport proteins signature 2." FT /inference="protein motif:ProSite:PS00217" FT sig_peptide complement(74771..74899) FT /gene="trkH" FT /locus_tag="VSAL_I0071" FT CDS complement(74902..76278) FT /transl_table=11 FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /old_locus_tag="TVS3201" FT /product="Trk system potassium uptake protein TrkA" FT /db_xref="GOA:B6EP18" FT /db_xref="InterPro:IPR003148" FT /db_xref="InterPro:IPR006036" FT /db_xref="InterPro:IPR006037" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EP18" FT /protein_id="CAQ77757.1" FT /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDKSSERLRELQDKYDL FT RVVQGFASHPDTLREAGAQDADMLVAVTNSDETNMIACQIAFTLFNTPNRIARIRSPEY FT LKEKERLFQSDAIPVDHLIAPEELVTGYIERLIEYPGALQVASFAEKKVSLVAVKAYYG FT GPLVGNALSALRDHMPHIDTRVAAIFRQGRPIRPQGTTVIEADDEVFFVAASNHIRSVM FT SELQRLERPYKRIMIVGGGNIGAGLAKRLEQNYSVKLIERNLKRAEQLSELLEESIVFC FT GDAADQELLSEEHIDQVDVFIAVTNEDEANIMSAMLAKRMGAKKVMVLIQRSAYVDLVQ FT GGVIDVAISPQQATISALLTHVRRADIVNVSSLRRGAAEAIEAIAHGDETTSKVVGKEV FT QNIKLPPGTTIGAIVRGEEVLIAHDKTVIEQDDHVVMFLVDKKYVQDVERLFQPSPFFL FT " FT misc_feature complement(74923..75132) FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /note="HMMPfam hit to PF02080, TrkA-C domain, score FT 7.3e-10" FT /inference="protein motif:HMMPfam:PF02080" FT misc_feature complement(75007..75579) FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /note="HMMPfam hit to PF03807, NADP oxidoreductase coenzyme FT F420-depen, score 0.0038" FT /inference="protein motif:HMMPfam:PF03807" FT misc_feature complement(75229..75576) FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /note="HMMPfam hit to PF02254, TrkA-N domain, score FT 5.2e-34" FT /inference="protein motif:HMMPfam:PF02254" FT misc_feature complement(75601..75816) FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /note="HMMPfam hit to PF02080, TrkA-C domain, score FT 4.2e-10" FT /inference="protein motif:HMMPfam:PF02080" FT misc_feature complement(75904..76272) FT /gene="trkA" FT /locus_tag="VSAL_I0072" FT /note="HMMPfam hit to PF02254, TrkA-N domain, score FT 3.6e-36" FT /inference="protein motif:HMMPfam:PF02254" FT CDS complement(76303..77637) FT /transl_table=11 FT /gene="rsmB" FT /locus_tag="VSAL_I0073" FT /old_locus_tag="TVS3202" FT /product="ribosomal RNA small subunit methyltransferase B" FT /EC_number="2.1.1.-" FT /note="Possible alternative translational start site after FT codon 18" FT /db_xref="GOA:B6EP19" FT /db_xref="InterPro:IPR001678" FT /db_xref="InterPro:IPR004573" FT /db_xref="InterPro:IPR006027" FT /db_xref="InterPro:IPR018314" FT /db_xref="InterPro:IPR023267" FT /db_xref="UniProtKB/TrEMBL:B6EP19" FT /protein_id="CAQ77758.1" FT /translation="MANIVFAILFCQSYLGDDMNVRAAAAKVIYQVVDQGHSLSSALPK FT AQSEIKPRDQALLQEICYGVLRFLPRLESVAQSLMDKPLKGKQRVFHHLILVGIYQLSF FT MRIPAHAAVGETVEGTKNLKGPKLRGLINGVLRSYQRSQEELDAKSISHDSGKYGHPGW FT LLKMLKEAYPTQWESIVEANNSKAPMWLRVNSQHHTRDEYIALLEKEEIAVTPHSQATD FT ALLLDKARDVFTLPGFEKGWVSVQDAAAQLSVEYLQPQDGELILDCCAAPGGKTAHILE FT RTKNTNVVAIDCDETRLTRVYENLERLNLEAKVICGDARHPEEWWQGEQFDRILLDAPC FT SATGVIRRHPDIKWLRRSEDIKALAELQSEIFDAMWLQLKSGGTMVYATCSITPQENGD FT QVKAFLERTENASLVDNTDPAKPGRQILPGEENMDGFYYAVLQKA" FT misc_feature complement(76312..77103) FT /gene="rsmB" FT /locus_tag="VSAL_I0073" FT /note="HMMPfam hit to PF01189, NOL1/NOP2/sun family, score FT 9.2e-104" FT /inference="protein motif:HMMPfam:PF01189" FT misc_feature complement(76612..76647) FT /gene="rsmB" FT /locus_tag="VSAL_I0073" FT /note="PS01153 NOL1/NOP2/sun family signature." FT /inference="protein motif:ProSite:PS01153" FT misc_feature complement(77209..77583) FT /gene="rsmB" FT /locus_tag="VSAL_I0073" FT /note="HMMPfam hit to PF01029, NusB family, score 1.7e-44" FT /inference="protein motif:HMMPfam:PF01029" FT misc_feature complement(77590..77625) FT /gene="rsmB" FT /locus_tag="VSAL_I0073" FT /note="PS00962 Ribosomal protein S2 signature 1." FT /inference="protein motif:ProSite:PS00962" FT CDS complement(77686..78651) FT /transl_table=11 FT /gene="fmt" FT /locus_tag="VSAL_I0074" FT /old_locus_tag="TVS3203" FT /product="methionyl-tRNA formyltransferase" FT /EC_number="2.1.2.9" FT /note="Possible alternative translational start site after FT codon 6" FT /db_xref="GOA:B6EP20" FT /db_xref="InterPro:IPR001555" FT /db_xref="InterPro:IPR002376" FT /db_xref="InterPro:IPR005793" FT /db_xref="InterPro:IPR005794" FT /db_xref="InterPro:IPR011034" FT /db_xref="InterPro:IPR015518" FT /db_xref="UniProtKB/TrEMBL:B6EP20" FT /protein_id="CAQ77759.1" FT /translation="MMTEVNLNKPLRIIFAGTPDFAARHLAALLDSHHEIIGVYTQPDR FT PAGRGKKLTASPVKELALKHAIPVFQPENFKSDDAKQELADQNADLMVVVAYGLLLPQA FT VLDTPKLGCINVHGSILPRWRGAAPIQRSIWAGDAETGVTIMQMDIGLDTGDMLNITTL FT PIEATDTSASMYNKLAELGPIALVNCLSDIANGNALAEKQNDEKANYAKKLSKEEAKID FT WTMDAETIERCVRAFNPWPMSHFSVDDKAIKVWQSRVETYEGDATPGTIIQADKTGIYV FT ATSSNAIVFEQLQVPGKKAMGVQDILNSRKEWFEVGNTLN" FT misc_feature complement(77719..78009) FT /gene="fmt" FT /locus_tag="VSAL_I0074" FT /note="HMMPfam hit to PF02911, Formyl FT transferase,C-terminal domain, score 2.4e-38" FT /inference="protein motif:HMMPfam:PF02911" FT misc_feature complement(78082..78627) FT /gene="fmt" FT /locus_tag="VSAL_I0074" FT /note="HMMPfam hit to PF00551, Formyl transferase, score FT 1.5e-63" FT /inference="protein motif:HMMPfam:PF00551" FT CDS complement(78654..79163) FT /transl_table=11 FT /gene="def" FT /locus_tag="VSAL_I0075" FT /old_locus_tag="TVS3204" FT /product="peptide deformylase (polypeptide deformylase)" FT /EC_number="3.5.1.88" FT /db_xref="GOA:B6EP21" FT /db_xref="InterPro:IPR000181" FT /db_xref="InterPro:IPR023635" FT /db_xref="UniProtKB/Swiss-Prot:B6EP21" FT /protein_id="CAQ77760.1" FT /translation="MAVLEVLTFPDDRLRTVAKPVKTVTPEIQTFIDDMIETMYDEEGI FT GLAATQVDFHQRIVVIDVSETRDEPMVLINPVITQKSGDDGIEEGCLSVPGAKGMVPRS FT AEVSVTALDRDGNEFSFDADDLLAICVQHELDHLEGKLFVDYLSPLKRKRIKEKLEKIK FT KFNEKN" FT misc_feature complement(78705..79157) FT /gene="def" FT /locus_tag="VSAL_I0075" FT /note="HMMPfam hit to PF01327, Polypeptide FT deformylase,score 2.9e-74" FT /inference="protein motif:HMMPfam:PF01327" FT CDS 79281..80342 FT /transl_table=11 FT /locus_tag="VSAL_I0076" FT /old_locus_tag="TVS3205" FT /product="putative cell wall degradation enzyme" FT /db_xref="GOA:B6EP22" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR018392" FT /db_xref="UniProtKB/TrEMBL:B6EP22" FT /protein_id="CAQ77761.1" FT /translation="MFKKMLILTSLFTTITLSPLSFSNEDKLMLKKDYPDTYTVEKGDT FT LWDISALFLDNPWFWPKLWKINPDINNPHLIYPGDKLSLSWHNGNPVLSLKPLQKLSPK FT TRIIEKEAVPTLAPSLVVPYLKSDRLIDDVNYRAAYRVLGTSDGRKFLSSNERVYVDGE FT LSHKEWGIYRVINEFKRRDNKEKAYALKSIGTAELVDSTEEFSGLRVLKQQQEITINDI FT VLPLDGKSNLSLTTTFYPLPAPTNSKASLLGSIDGGDYLAVNQVAVIDKGTNDGLQQGS FT MFALKEKGYAVKGDKGEYHYDDENNKKSIQLPETVVGELIVIRPYESFSLALITRSETP FT IHKRMIVTSPQTK" FT sig_peptide 79281..79349 FT /locus_tag="VSAL_I0076" FT misc_feature 79392..79535 FT /locus_tag="VSAL_I0076" FT /note="HMMPfam hit to PF01476, LysM domain, score 7.1e-11" FT /inference="protein motif:HMMPfam:PF01476" FT CDS 80351..81460 FT /transl_table=11 FT /gene="smf" FT /locus_tag="VSAL_I0077" FT /old_locus_tag="TVS3206" FT /product="Smf protein" FT /db_xref="GOA:B6EP23" FT /db_xref="InterPro:IPR003488" FT /db_xref="UniProtKB/TrEMBL:B6EP23" FT /protein_id="CAQ77762.1" FT /translation="MFNSDKHLSAWLTLCFCPRIGGKVMSRLLAIDSVENIVKYDKDKL FT QSIGLSCAQIAYIQAVNHEEVDKCLLWEDGDSLNTILTLSDPRYPKLLSEISAPPPVLF FT VKGDVLALSEPQVAIVGSRNASLEGLECAKQFAASIVQHNYVVTSGLALGVDGYAHHGA FT IEAKGQTIAVLGSGLNKVYPAKHRTLADRVIHNGALVSEFRPDSPPRADNFPRRNRIIS FT GLSTGVLVVEAAERSGSLITARYANEQGREVFALPGSIHNPTAQGSNSLIKAGAKLVSS FT PEDIFEEIGALTYCAISHQPSLFEQEVVTEQLPFPKVFATVGIEATPVDIIAERCQTPV FT HEIMMQLLELELQGFITAVPGGYIKKRRG" FT misc_feature 80558..81190 FT /gene="smf" FT /locus_tag="VSAL_I0077" FT /note="HMMPfam hit to PF02481, SMF family, score 9.5e-93" FT /inference="protein motif:HMMPfam:PF02481" FT CDS 81463..81936 FT /transl_table=11 FT /locus_tag="VSAL_I0078" FT /old_locus_tag="TVS3207" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007456" FT /db_xref="UniProtKB/Swiss-Prot:B6EP24" FT /protein_id="CAQ77763.1" FT /translation="MMDVLMYLFETYIHSDIELTVDQEKLEDELLKAGFHQEAIYKALD FT WLEDLAHLQETDSHEHIAKSTSTAMRIYTQQEIDGIDTVCRGFLLFLEQIKVLTCETRE FT MVIEQVMTLETEDLSLDDLKWVILMVLFNVPGQESAYTQMEELLYTSDTGMTH" FT misc_feature 81463..81933 FT /locus_tag="VSAL_I0078" FT /note="HMMPfam hit to PF04361, Protein of unknown function FT (DUF494), score 4.5e-94" FT /inference="protein motif:HMMPfam:PF04361" FT CDS 81946..82515 FT /transl_table=11 FT /gene="yrdD" FT /locus_tag="VSAL_I0079" FT /old_locus_tag="TVS3208" FT /product="DNA topoisomerase" FT /EC_number="5.99.1.2" FT /note="Similar to Bacillus subtilis DNA topoisomerase 1 FT TopA UniProt:P39814 (691 aa) fasta scores: FT E()=2e-10,32.258% id in 124 aa" FT /db_xref="GOA:B6EP25" FT /db_xref="InterPro:IPR013498" FT /db_xref="UniProtKB/TrEMBL:B6EP25" FT /inference="similar to sequence:UniProt:P39814" FT /protein_id="CAQ77764.1" FT /translation="MSGKINKQLFQAHEHALDHESCPQCSGELAIRYGKRGPFLGCGNY FT PECDYIRPLKSNDGHVVKELGIPCPECDSELVLRQGRYGMFIGCSSYPECSHIESLEQK FT KEEPKELLACPSCHSGSLHEKQSRFGKTFYACDAYPVCRFVVNFAPEKGICQQCGFELL FT LRKEIATGLKLVCADKKCSVVQDIKK" FT misc_feature 82000..82116 FT /gene="yrdD" FT /locus_tag="VSAL_I0079" FT /note="HMMPfam hit to PF01396, Topoisomerase DNA binding C4 FT zinc fing, score 3.6e-16" FT /inference="protein motif:HMMPfam:PF01396" FT misc_feature 82141..82257 FT /gene="yrdD" FT /locus_tag="VSAL_I0079" FT /note="HMMPfam hit to PF01396, Topoisomerase DNA binding C4 FT zinc fing, score 4.2e-17" FT /inference="protein motif:HMMPfam:PF01396" FT misc_feature 82285..82398 FT /gene="yrdD" FT /locus_tag="VSAL_I0079" FT /note="HMMPfam hit to PF01396, Topoisomerase DNA binding C4 FT zinc fing, score 3.1e-09" FT /inference="protein motif:HMMPfam:PF01396" FT CDS complement(82555..83673) FT /transl_table=11 FT /gene="purK" FT /locus_tag="VSAL_I0080" FT /old_locus_tag="TVS3209" FT /product="phosphoribosylaminoimidazole carboxylase ATPase FT subunit PurK" FT /db_xref="GOA:B6EP26" FT /db_xref="InterPro:IPR003135" FT /db_xref="InterPro:IPR005875" FT /db_xref="InterPro:IPR011054" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="UniProtKB/TrEMBL:B6EP26" FT /protein_id="CAQ77765.1" FT /translation="MMKVLVLGSGQLARMMSLASAPLNIDIIAYDVNNNKIVHPLTQQV FT MDTTLEQTINSVDVITAEFEHIPYDILDICSQSGKFQPNPEAIKAGGDRRIEKTLLDNA FT NVANATHHIITTKQEFLDSISSVGLPMVLKSALGGYDGKGQWRLKEASQIDHIWEEMNE FT LIQSTPNQAIVAEQFIPFNREVSLIGARNKNGDIVTYPLTENVHVNGVLALSTALEGTS FT LLQQQADDMFSAIVNELDYIGVLAIEFFDVDGQLLVNEIAPRVHNSGHWTQQGTDVCQF FT EMHIRAVCNLPLVGAELIRSTAMINILGEDSLPKELLTMPHCHIHWYGKEKRVGRKMGH FT INVCASSPEALEKELMALSELLDKNAFQVLSK" FT misc_feature complement(82846..83397) FT /gene="purK" FT /locus_tag="VSAL_I0080" FT /note="HMMPfam hit to PF02222, ATP-grasp domain, score FT 3.9e-65" FT /inference="protein motif:HMMPfam:PF02222" FT sig_peptide complement(83617..83673) FT /gene="purK" FT /locus_tag="VSAL_I0080" FT CDS complement(83673..84209) FT /transl_table=11 FT /gene="purE" FT /locus_tag="VSAL_I0081" FT /old_locus_tag="TVS3210" FT /product="phosphoribosylaminoimidazole carboxylase FT catalytic subunit" FT /EC_number="4.1.1.21" FT /db_xref="GOA:B6EP27" FT /db_xref="InterPro:IPR000031" FT /db_xref="InterPro:IPR024694" FT /db_xref="UniProtKB/TrEMBL:B6EP27" FT /protein_id="CAQ77766.1" FT /translation="MLPTFYILPLSLSKEFTMKVGIIMGSKSDWPTMKLAAEMLERFNV FT PYETKVVSAHRTPQLLADYATQAKDRGIKVIIAGAGGAAHLPGMAAAFTSIPVLGVPVQ FT SKVLKGIDSLLSIVQMPKGIAVGTLAIGEAGAANAGILAAQIIGTSNEAVMAAVEAFRK FT EQTDTVLANPDPSED" FT misc_feature complement(83682..84158) FT /gene="purE" FT /locus_tag="VSAL_I0081" FT /note="HMMPfam hit to PF00731, AIR carboxylase, score FT 4.8e-92" FT /inference="protein motif:HMMPfam:PF00731" FT CDS 84360..84917 FT /transl_table=11 FT /locus_tag="VSAL_I0082" FT /old_locus_tag="TVS3211" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EP28" FT /db_xref="InterPro:IPR006070" FT /db_xref="InterPro:IPR017945" FT /db_xref="InterPro:IPR023535" FT /db_xref="UniProtKB/TrEMBL:B6EP28" FT /protein_id="CAQ77767.1" FT /translation="MKNLDQVVKALNNGGVIAYPTEGVFGVGCDPDNEFALHQLLKVKQ FT RPREKGLILIAASIDQLLPYIDLAQLNNDQINRIKFTWPGPVTWIVPVNKNTLPLVTGQ FT FDSIAVRVSAHPQVKAICSAFGKPITSTSANLSGYEPCRTVLEVEEQLGDLGVVVFQGE FT IGNRTQPTEIRDAKTGETLRQG" FT misc_feature 84381..84914 FT /locus_tag="VSAL_I0082" FT /note="HMMPfam hit to PF01300, yrdC domain, score 1.7e-55" FT /inference="protein motif:HMMPfam:PF01300" FT CDS 84984..85805 FT /transl_table=11 FT /gene="aroE" FT /locus_tag="VSAL_I0083" FT /old_locus_tag="TVS3212" FT /product="shikimate dehydrogenase" FT /EC_number="1.1.1.25" FT /db_xref="GOA:B6EP29" FT /db_xref="InterPro:IPR006151" FT /db_xref="InterPro:IPR011342" FT /db_xref="InterPro:IPR013708" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR022893" FT /db_xref="UniProtKB/Swiss-Prot:B6EP29" FT /protein_id="CAQ77768.1" FT /translation="MDKYAVFGHPIKQSKSPFIHTLFARQTIQPLEYVAIEAPVDGFLN FT SVTHFFSNGGKGCNITVPFKEEAFQFADQLTDRAKLAGAVNTLKKLDDGIILGDNTDGE FT GLVQDLLQYQVPLQDKRILLIGAGGAARGVLLPLLKQNPSSITVVNRTYEKAEALAEIF FT SAYGAVEAVRMSDVTRSFDVIINSTSASLSGELPNISPVIFSKGSISYDMMYGKGKTVF FT NQWALDNDVYQAYDGLGMLVGQAAESFTVWRGLRPSSKQILRELRKNLEGM" FT misc_feature 84999..85247 FT /gene="aroE" FT /locus_tag="VSAL_I0083" FT /note="HMMPfam hit to PF08501, Shikimate dehydrogenase FT substrate bind, score 3.4e-29" FT /inference="protein motif:HMMPfam:PF08501" FT misc_feature 85299..85652 FT /gene="aroE" FT /locus_tag="VSAL_I0083" FT /note="HMMPfam hit to PF01488, Shikimate / quinate FT 5-dehydrogenase, score 7.2e-27" FT /inference="protein motif:HMMPfam:PF01488" FT CDS 85879..86064 FT /transl_table=11 FT /locus_tag="VSAL_I0084" FT /old_locus_tag="TVS3213" FT /product="hypothetical protein" FT /note="Similar to Vibrio fischeri Hypothetical protein FT UniProt:Q5E1R7 (87 aa) fasta scores: E()=7e-11, 65.000% id FT in 60 aa" FT /db_xref="InterPro:IPR009962" FT /db_xref="UniProtKB/TrEMBL:B6EP30" FT /inference="similar to sequence:UniProt:Q5E1R7" FT /protein_id="CAQ77769.1" FT /translation="MGNLIPCLVFVSWLASESGETITNELDALRIFEEYRFDIEEHAEA FT LIEDEEFNASGEVEIK" FT CDS complement(86057..86602) FT /transl_table=11 FT /locus_tag="VSAL_I0085" FT /old_locus_tag="TVS3214" FT /product="putative transferase" FT /db_xref="GOA:B6EP31" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:B6EP31" FT /protein_id="CAQ77770.1" FT /translation="MNSSLRSYKSTFPTIGLRSYIDSSSILIGDINIGDDCSVWPLVVA FT RGDVNSIVIGQRTNIQDGSILHVTHKNPENPKGAPLLIGDDVTIGHKVMLHGCEIKDRV FT LVGMGSIILDNAIIESDVMIGAGSLIPPNKILKSGYLYIGSPVKQVRSLSTDEIGFLKK FT SAMNYVSFKNSYINEEAI" FT misc_feature complement(86189..86242) FT /locus_tag="VSAL_I0085" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 14" FT /inference="protein motif:HMMPfam:PF00132" FT misc_feature complement(86243..86296) FT /locus_tag="VSAL_I0085" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 4" FT /inference="protein motif:HMMPfam:PF00132" FT misc_feature complement(86312..86365) FT /locus_tag="VSAL_I0085" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 16" FT /inference="protein motif:HMMPfam:PF00132" FT misc_feature complement(86399..86452) FT /locus_tag="VSAL_I0085" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 63" FT /inference="protein motif:HMMPfam:PF00132" FT misc_feature complement(86462..86515) FT /locus_tag="VSAL_I0085" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 21" FT /inference="protein motif:HMMPfam:PF00132" FT rRNA 87125..88661 FT /locus_tag="VSAL_I3071r" FT /product="16S ribosomal RNA" FT rRNA 88992..91882 FT /locus_tag="VSAL_I3072r" FT /product="23S ribosomal RNA" FT rRNA 91976..92095 FT /locus_tag="VSAL_I3073r" FT /product="5S ribosomal RNA" FT rRNA 92502..94038 FT /locus_tag="VSAL_I3074r" FT /product="16S ribosomal RNA" FT tRNA 94110..94183 FT /locus_tag="VSAL_I3075t" FT /product="transfer RNA-Ile" FT tRNA 94226..94298 FT /locus_tag="VSAL_I3076t" FT /product="transfer RNA-Ala" FT rRNA 94571..97458 FT /locus_tag="VSAL_I3077r" FT /product="23S ribosomal RNA" FT rRNA 97552..97671 FT /locus_tag="VSAL_I3078r" FT /product="5S ribosomal RNA" FT rRNA 98079..99614 FT /locus_tag="VSAL_I3079r" FT /product="16S ribosomal RNA" FT tRNA 99711..99783 FT /locus_tag="VSAL_I3080t" FT /product="transfer RNA-Glu" FT tRNA 99789..99861 FT /locus_tag="VSAL_I3081t" FT /product="transfer RNA-Lys" FT tRNA 99896..99968 FT /locus_tag="VSAL_I3082t" FT /product="transfer RNA-Val" FT rRNA 100241..103131 FT /locus_tag="VSAL_I3083r" FT /product="23S ribosomal RNA" FT rRNA 103225..103344 FT /locus_tag="VSAL_I3084r" FT /product="5S ribosomal RNA" FT rRNA 103751..105287 FT /locus_tag="VSAL_I3085r" FT /product="16S ribosomal RNA" FT tRNA 105384..105456 FT /locus_tag="VSAL_I3086t" FT /product="transfer RNA-Glu" FT tRNA 105462..105534 FT /locus_tag="VSAL_I3087t" FT /product="transfer RNA-Lys" FT tRNA 105562..105634 FT /locus_tag="VSAL_I3088t" FT /product="transfer RNA-Ala" FT tRNA 105669..105741 FT /locus_tag="VSAL_I3089t" FT /product="transfer RNA-Val" FT rRNA 106014..108904 FT /locus_tag="VSAL_I3090r" FT /product="23S ribosomal RNA" FT rRNA 108998..109117 FT /locus_tag="VSAL_I3091r" FT /product="5S ribosomal RNA" FT rRNA 109524..111060 FT /locus_tag="VSAL_I3092r" FT /product="16S ribosomal RNA" FT rRNA 111391..114281 FT /locus_tag="VSAL_I3093r" FT /product="23S ribosomal RNA" FT rRNA 114375..114494 FT /locus_tag="VSAL_I3094r" FT /product="5S ribosomal RNA" FT tRNA 114553..114626 FT /locus_tag="VSAL_I3095t" FT /product="transfer RNA-Thr" FT rRNA 114645..114765 FT /locus_tag="VSAL_I3096r" FT /product="5S ribosomal RNA" FT CDS complement(114812..115696) FT /transl_table=11 FT /gene="ilvY" FT /locus_tag="VSAL_I0086" FT /old_locus_tag="TVS3308" FT /product="HTH-type transcriptional regulator, LysR-family" FT /db_xref="GOA:B6EP32" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EP32" FT /protein_id="CAQ77771.1" FT /translation="MNIKLLQTFLHLCESHSFTNTSKAMHLSLSALSRQIQKLEDEIGH FT PLFVRDNRSVELTSSAKKLMPIALNICSEWSSYKSSSNTVNNSLKGELKLFCSVTASYS FT HLPQLLNNFKVNYPHIEIKLSTGDPAQAIKKVESSEVDIAISAIPEKRSNKLAFEIISE FT IPLSIIAPIGNNTFSGDINKENTNWDTLPFILPKEGTARERANLWFKEQKIKPTIYAQV FT SGHEAIVSMVALGCGIGIAPDVVINNSPVKDKIQRLNTTPIAPFKLGLCCKQSKLNDSV FT IQALWRVAENTFI" FT misc_feature complement(114815..115441) FT /gene="ilvY" FT /locus_tag="VSAL_I0086" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 5e-24" FT /inference="protein motif:HMMPfam:PF03466" FT misc_feature complement(115511..115690) FT /gene="ilvY" FT /locus_tag="VSAL_I0086" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 3.6e-17" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature complement(115556..115648) FT /gene="ilvY" FT /locus_tag="VSAL_I0086" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature complement(115586..115651) FT /gene="ilvY" FT /locus_tag="VSAL_I0086" FT /note="Predicted helix-turn-helix motif with score FT 1546.000, SD 4.45 at aa 16-37, sequence FT HSFTNTSKAMHLSLSALSRQIQ" FT CDS 115825..117309 FT /transl_table=11 FT /gene="ilvC" FT /locus_tag="VSAL_I0087" FT /old_locus_tag="TVS3307" FT /product="ketol-acid reductoisomerase" FT /EC_number="1.1.1.86" FT /db_xref="GOA:B6EP33" FT /db_xref="InterPro:IPR000506" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR013023" FT /db_xref="InterPro:IPR013116" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR014359" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:B6EP33" FT /protein_id="CAQ77772.1" FT /translation="MSNYFDTLNLREQLDQLGRCRFMDREEFSTEADYLKGKRVVIVGC FT GAQGLNQGLNMRDSGLNVAYALRQAAIDEQRQSFKNASENGFEVASYEKLIPQADLVIN FT LTPDKQHTNVVETVMPLMKEGATLGYSHGFNIVEEGMKIRKDLTVVMVAPKCPGTEVRE FT EYKRGFGVPTLIAVHPENDPKGEGWDIAKAWAAGTGGHRAGCLESSFVAEVKSDLMGEQ FT TILCGMLQAGSIVCYEKMIADGIDASYAGKLLQFGWETVTEALKFGGVTHMMDRLSNPA FT KIKAFDLSEELKDLMRPLYNKHMDDIISGHFSSTMMADWANDDVNLLGWREETGETAFE FT NYPDSSLEIPEQEYFDNGILMVAMVRAGVELAFEAMTASGIVDESAYYESLHELPLIAN FT TVARKRLYEMNVVISDTAEYGNYLFANVATPLLREKFMPLVDTDVIGRGLGAISNQVDN FT AKLIEVNETIRNHPVEYIGEELRGYMTDMKTIAVGG" FT misc_feature 115924..116436 FT /gene="ilvC" FT /locus_tag="VSAL_I0087" FT /note="HMMPfam hit to PF07991, Acetohydroxy acid FT isomeroreductase, catalyti, score 9.4e-87" FT /inference="protein motif:HMMPfam:PF07991" FT misc_feature 116452..117288 FT /gene="ilvC" FT /locus_tag="VSAL_I0087" FT /note="HMMPfam hit to PF01450, Acetohydroxy acid FT isomeroreductase, catalyti, score 1.2e-117" FT /inference="protein motif:HMMPfam:PF01450" FT CDS complement(117397..117648) FT /transl_table=11 FT /locus_tag="VSAL_I0088" FT /old_locus_tag="TVS3306" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007475" FT /db_xref="UniProtKB/TrEMBL:B6EP34" FT /protein_id="CAQ77773.1" FT /translation="MFNPKKLEQVAKQIHDSMPQPVKELGTDVEQKVRQVIQGQLNKLD FT IVAREEFDVQTQVLLRTRKKLTEMEQKLALLEEKLSEK" FT misc_feature complement(117400..117648) FT /locus_tag="VSAL_I0088" FT /note="HMMPfam hit to PF04380, Protein of unknown function FT (DUF526), score 7.9e-41" FT /inference="protein motif:HMMPfam:PF04380" FT CDS complement(117758..120826) FT /transl_table=11 FT /locus_tag="VSAL_I0089" FT /old_locus_tag="TVS3305" FT /product="putative integral membrane component of multidrug FT efflux system" FT /note="Similar to Escherichia coli Acriflavine resistance FT protein F AcrF UniProt:P24181 (1034 aa) blastp scores: FT E()=0e-130" FT /db_xref="GOA:B6EP35" FT /db_xref="InterPro:IPR001036" FT /db_xref="UniProtKB/TrEMBL:B6EP35" FT /inference="similar to sequence:UniProt:P24181" FT /protein_id="CAQ77774.1" FT /translation="MRFTDVFIKRPVLAVSISFLIALLGIQAIFKMQVREYPEMTNTVV FT TVTTSYYGASADLIQGFITQPLEQAVAQADNIDFMTSQSVMGQSTITVTMKLNTDPNAA FT LSDILAKTNSVRSQLPKEAEDPTVTMSTGSTTAVLYIGFTSDELASSQITDYLERVVNP FT QLFTVNGVSKIDLYGGIRYALRIWLEPARMAAVNMTATDVMSVLNANNFQSAAGQATGE FT FVLYNGSANTQVSNVEELERLVIKTDDGEVVRLSDIAKVSLEKSHDIYRASANGKEAVV FT TAINAAPSANPINIAADVLKLLPQLEKNLPTNIKMNIMYDSTIAINESIHEVIKTIVEA FT AVIVLIVITLFLGSFRAVIIPIVTIPLSLVGVAMVMQVMGFSWNLMTLLAMVLAIGLVV FT DDAIVVLENVDRHVKLGETPFRAAIIGTREIAIPVIAMTLTLGAVYAPIAMMGGITGSL FT FKEFALTLAGSVFVSGIVALTLSPMMCSKMLKANEVPSKFESTVHHFLDGMTNKYERIL FT GSVMQHRPVIIAFAVIVFASLPLLFKFIPSELAPSEDKGVVMLMGTGTSNANLDYLQNT FT MNDVNKILSDQPEIAFAQVFTGVPNSNQAFGIASMVPWSQREASQAEVTDRVGKLVQNV FT PGMAVTAFQMPELPGAGSGLPIQFVITTPNSFESLFQIATEVLTEVKGSPLFVYSDIDL FT NFDSATMKINIDKDKAGAYGVTMQDIGITLSTMMADGYVNRIDLNGRSYEVIPQVERKF FT RLNPESMNNYYVRSASGEAVPLGSLIAIDVIAEPRSLPHFNQLNSATVGAVPSPGVAMG FT DAISWFENIANSKLPSGYNHDYMGEARQYVTEGSALYATFGLALAIIFLVLAIQFESIR FT DPLVIMVSVPLAICGALIALAWGAATMNIYSQVGLITLVGLITKHGILICEVAKEEQLH FT NLKNRVEAVTEAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQRFSIGIVIVAGLAIG FT TLFTLFVLPVIYSYLASEHKPLPEFEEGKEIQE" FT misc_feature complement(117812..120820) FT /locus_tag="VSAL_I0089" FT /note="HMMPfam hit to PF00873, AcrB/AcrD/AcrF family,score FT 3.8e-283" FT /inference="protein motif:HMMPfam:PF00873" FT misc_feature complement(order(117824..117892,117911..117979, FT 118139..118207,118226..118294,119201..119254, FT 119384..119443,119471..119539,119609..119677, FT 119690..119758,119762..119821,120737..120793)) FT /locus_tag="VSAL_I0089" FT CDS complement(120838..121944) FT /transl_table=11 FT /locus_tag="VSAL_I0090" FT /old_locus_tag="TVS3304" FT /product="putative multidrug transporter, HlyD family" FT /note="Similar to Pseudomonas aeruginosa Multidrug FT transporter, membrane fusion protein MexA (PDB FT 1VF7),evalue=3e-21, identity=(80, 326)" FT /db_xref="GOA:B6EP36" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:B6EP36" FT /protein_id="CAQ77775.1" FT /translation="MKKWTFFMLLLALLIFGSVIGFNMFKQQKIAEFMANRPEPEFPVT FT IETVKASTWTPTIEAIGFIEPNQGVTLTTESNGVIDKISFDSGSQVKDDQLLISLDSKV FT EKANLRSSQARLPAAEAKYKRYKGLFKKGSISKEAYDEAEANFFSLAADIEGLKATIER FT REIKAPFAGVIGIRNVYLGQYLQPGTDIVRLEDTSIMRLRFTVPQTDISRINIGQDIDI FT YIDSYPTETFKGSISAIEPAVNIQSGLIQVQADIPNNGGKLRSGMFARAEIILPAFENQ FT VVIPQTSITFTLYGDNVYIVSDVDGVKRVKQAVVKVGERTKAVAHILDGVKPGDMVVTS FT GQVRLSNDAKVRVVESDATTPPAETPML" FT misc_feature complement(120928..121743) FT /locus_tag="VSAL_I0090" FT /note="HMMPfam hit to PF00529, HlyD family secretion FT protein, score 0.00067" FT /inference="protein motif:HMMPfam:PF00529" FT misc_feature complement(121870..121926) FT /locus_tag="VSAL_I0090" FT sig_peptide complement(121882..121944) FT /locus_tag="VSAL_I0090" FT CDS complement(121963..122562) FT /transl_table=11 FT /locus_tag="VSAL_I0091" FT /old_locus_tag="TVS3303" FT /product="HTH-type transcriptional regulator, TetR family" FT /db_xref="GOA:B6EP37" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR015893" FT /db_xref="InterPro:IPR023772" FT /db_xref="InterPro:IPR023773" FT /db_xref="UniProtKB/TrEMBL:B6EP37" FT /protein_id="CAQ77776.1" FT /translation="MNVHSFHKDSFMKEKRRLILESAEQLLATDGFRGLSMQKVANQAG FT VAAGTIYRYFDDKEALIQEIKLNILQRVACAIQENVCNTDPLKVRFRTMWLNIWYFAIS FT EKNTFLNRNQYESLPTTDLVKFRELEKEMFAQVNQLFVDGLEQGVFKPFNVEILTGLSL FT ETSVCLARRYAQGTFTLTDDDLDSAIEASWDAIIKH" FT misc_feature complement(122368..122508) FT /locus_tag="VSAL_I0091" FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 2.4e-18" FT /inference="protein motif:HMMPfam:PF00440" FT misc_feature complement(122380..122472) FT /locus_tag="VSAL_I0091" FT /note="PS01081 Bacterial regulatory proteins, tetR family FT signature." FT /inference="protein motif:ProSite:PS01081" FT misc_feature complement(122395..122460) FT /locus_tag="VSAL_I0091" FT /note="Predicted helix-turn-helix motif with score FT 1736.000, SD 5.10 at aa 35-56, sequence FT LSMQKVANQAGVAAGTIYRYFD" FT CDS 122717..124732 FT /transl_table=11 FT /gene="rep" FT /locus_tag="VSAL_I0092" FT /old_locus_tag="TVS3302" FT /product="ATP-dependent DNA helicase rep" FT /db_xref="GOA:B6EP51" FT /db_xref="InterPro:IPR000212" FT /db_xref="InterPro:IPR005752" FT /db_xref="InterPro:IPR013986" FT /db_xref="InterPro:IPR014016" FT /db_xref="InterPro:IPR014017" FT /db_xref="UniProtKB/TrEMBL:B6EP51" FT /protein_id="CAQ77777.1" FT /translation="MRLNPQQDEAVKFVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGY FT KARNIAAVTFTNKAAREMKERVGQTLNKQESRGLLVSTFHSLGLDIIRREYKILGLKAG FT FSLFDDQDQLALLKELTEKQIDGDKDLLRQLLSCISKWKTDMLTPDQVKGIVRSEQEQL FT FAFCYEMYLTQMKAYNALDFDDLISLPVLLLRNNQDVRERWQMKLRYLLVDEYQDTNTS FT QYELVKLLVGERGRLTVVGDDDQSIYSWRGAKPQNLILLSEDYPNLKVIKLEQNYRSTS FT RILRAANILIANNPHAFEKRLFSEIPDGEQIKILTAKDDAHEAERVVGEIIAHRFLNRT FT DYKDYAVLYRGNHQSRLIEKSLMQNRVPYKISGGTSFFSRSEIKDIMAYLRLLTNPDDD FT NAFLRVVNTPRREIGPVTLEKLGTYANMRGKSLFEACFEMGLEQTLSGRGLESLRRFGH FT WVVSISENAERGNTVEAVRSLVKDIHYEDWLYETSPSAKAAEMRMKNVSDLYSWIVADL FT EGDNYDKEEKTLKEVVLRLTLRDMMERGEDEDGADQVQLMTLHASKGLEFPYVYLIGAE FT EGILPHQTSVDEDNVEEERRLAYVGITRAKKELTFTLCKERRQYGELIRPTPSRFLEEL FT PQDDLDWEMKKPKPTQEERMEKGKSNIAHLRAMLKK" FT misc_feature 122723..124171 FT /gene="rep" FT /locus_tag="VSAL_I0092" FT /note="HMMPfam hit to PF00580, UvrD/REP helicase, score FT 1e-211" FT /inference="protein motif:HMMPfam:PF00580" FT misc_feature 122780..122803 FT /gene="rep" FT /locus_tag="VSAL_I0092" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(124833..125240) FT /transl_table=11 FT /locus_tag="VSAL_I0093" FT /old_locus_tag="TVS3301" FT /product="cytochrome c" FT /db_xref="GOA:B6EP52" FT /db_xref="InterPro:IPR002323" FT /db_xref="InterPro:IPR009056" FT /db_xref="UniProtKB/TrEMBL:B6EP52" FT /protein_id="CAQ77778.1" FT /translation="MDKSIRNTIVAIVAALTFSTASFAANNADDAIAERIKPVGQVYLA FT SDVPVVEEPTGPRTGDQVYNTFCIACHSTGAAGAPKTQNAADWAPRIAKGMDVLKDHAI FT NGFNAMPARGTCMNCSDDELVAAIDHLIKGL" FT misc_feature complement(124836..125072) FT /locus_tag="VSAL_I0093" FT /note="HMMPfam hit to PF00034, Cytochrome c, score 0.018" FT /inference="protein motif:HMMPfam:PF00034" FT sig_peptide complement(125169..125240) FT /locus_tag="VSAL_I0093" FT tRNA 125523..125596 FT /locus_tag="VSAL_I3097t" FT /product="transfer RNA-Arg" FT tRNA 125644..125716 FT /locus_tag="VSAL_I3098t" FT /product="transfer RNA-His" FT tRNA 125805..125878 FT /locus_tag="VSAL_I3099t" FT /product="transfer RNA-Pro" FT tRNA 125924..125996 FT /locus_tag="VSAL_I3100t" FT /product="transfer RNA-His" FT tRNA 126084..126157 FT /locus_tag="VSAL_I3101t" FT /product="transfer RNA-Pro" FT CDS join(126692..127534,127536..128423) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0094" FT /old_locus_tag="TVS3296" FT /product="ABC transporter, ATP-binding protein FT (pseudogene)" FT /note="Similar to Vibrio fischeri Dipeptide transport FT ATP-binding protein DppD UniProt:Q5E1T2 (578 aa) fasta FT scores: E()=1e-173, 94.435% id in 575 aa. CDS contains a FT frameshift after codon 290. The sequence has been checked FT and is believed to be correct" FT /db_xref="PSEUDO:CAQ77779.1" FT /inference="similar to sequence:UniProt:Q5E1T2" FT misc_feature 126815..127408 FT /locus_tag="VSAL_I0094" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 9.2e-58" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature 126836..126859 FT /locus_tag="VSAL_I0094" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 127178..127222 FT /locus_tag="VSAL_I0094" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature order(127415..127534,127536..127562) FT /locus_tag="VSAL_I0094" FT /note="HMMPfam hit to PF08352, Oligopeptide/dipeptide FT transporter, C-termi, score 0.00011" FT /inference="protein motif:HMMPfam:PF08352" FT misc_feature 127734..128312 FT /locus_tag="VSAL_I0094" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.8e-69" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature 127755..127778 FT /locus_tag="VSAL_I0094" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 128082..128126 FT /locus_tag="VSAL_I0094" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 128498..130051 FT /transl_table=11 FT /locus_tag="VSAL_I0095" FT /old_locus_tag="TVS3295" FT /product="transport protein, extracellular solute-binding FT protein" FT /db_xref="GOA:B6EP54" FT /db_xref="InterPro:IPR000914" FT /db_xref="InterPro:IPR023765" FT /db_xref="UniProtKB/TrEMBL:B6EP54" FT /protein_id="CAQ77780.1" FT /translation="MKTIKTKLAIAIMAAGLSFSAAAADITVAYDADPVSLDPHEQLSG FT GTLQLSHMVFDPLVRYTQEFDFEPRLAEKWERVDDKTFRFTLRKGVKFHSGNTMTADDV FT VWTFNRLKDSADFKAIFAPYEKLVKIDDYTVELISKGAYPLVLQTATYLFPMDSKFYSG FT KTEDGKDKDEIVKHGNSFTSTHISGTGPFVVKSREQGVKVVFDRFDGYWDKNSPGNVDE FT LTLVPIKENATRVAALLSGDVDVIAPVAPNDHKRVKNTKGIDLVTLPGTRLISFQMNQT FT SNEALKDVRVRQAIVHAINNEGIVKKIMKGFATAAGQQSPPGYSGYDADLVPRYDLKKA FT KELMKEAGYENGFKLSMMAPNNRYVNDAKIAQAAAAMLSKIGIKVDLKTLPKAQYWPEF FT DVCSADMMMIGWHSDTEDSANLTEFLTMTRNEETGKGQYNCGHYSNPEVDRLIEAANVE FT TDPAKRSEMLKTVEDTLYNDAAFVPLHWQNLAWGAKSNIDIQPIVNSMEYPYFGDLVVK FT " FT sig_peptide 128498..128566 FT /locus_tag="VSAL_I0095" FT misc_feature 128693..129796 FT /locus_tag="VSAL_I0095" FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding prot, score 4e-80" FT /inference="protein motif:HMMPfam:PF00496" FT misc_feature 128711..128776 FT /locus_tag="VSAL_I0095" FT /note="PS01040 Bacterial extracellular solute-binding FT proteins, family 5 signature." FT /inference="protein motif:ProSite:PS01040" FT CDS 130188..131165 FT /transl_table=11 FT /locus_tag="VSAL_I0096" FT /old_locus_tag="TVS3294" FT /product="binding-protein-dependent transport system,inner FT membrane component" FT /note="Similar to Bacillus subtilis Oligopeptide transport FT system permease protein AppB UniProt:P42062 (317 aa) fasta FT scores: E()=1e-32, 34.161% id in 322 aa" FT /db_xref="GOA:B6EP55" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:B6EP55" FT /inference="similar to sequence:UniProt:P42062" FT /protein_id="CAQ77781.1" FT /translation="MFTFLVKRLFQALIVMFVISLVAFSIQDNLGDPLRELVGQSVSES FT ERQALRDDLGLNDPFVTKYTRFITNAVQGDLGTSYFFKKPAVEVILDKLVATLELVLGS FT ALIIICLSIPLGVYSAIHPKSFFTKAIMAFSSIGISIPVFLTAIMLMYVFSIELNWLPS FT YGRGETYNLLGWESGFFTIDGLAHLVLPCVSLASIMLPLFIRLVRSEMIEVLSSEYIKF FT AKAKGIATNKIYYQHALKNTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAI FT NRVDTPLITAYVIFVGLIFVVTNTIVDLLYGLINPTVDITGKGA" FT sig_peptide 130188..130262 FT /locus_tag="VSAL_I0096" FT misc_feature order(130212..130265,130485..130553,130587..130655, FT 130740..130808,130911..130979,131061..131129) FT /locus_tag="VSAL_I0096" FT misc_feature 130467..131147 FT /locus_tag="VSAL_I0096" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 6.1e-46" FT /inference="protein motif:HMMPfam:PF00528" FT CDS 131168..132109 FT /transl_table=11 FT /locus_tag="VSAL_I0097" FT /old_locus_tag="TVS3293" FT /product="binding-protein-dependent transport system,inner FT membrane component" FT /db_xref="GOA:B6EP56" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:B6EP56" FT /protein_id="CAQ77782.1" FT /translation="MNTTTNRVPTRWERFKSSDFLYYFLRDKVAMFSFAVFVVFVLGAL FT LSPVLAPSNPYDLSSIDIMDSELPPSWMEEGDERFLLGTDDQGRDVLSTILYGSRLSLT FT IGFLAVAVQLTLGIVIGLSAGYFGGRIDSFLMRFADVQLSFSTMMVAIIVSAIFKASFG FT TEFFSQYAVIMLVVIIGIAEWPQYARTIRASVLAEKQKEYVEAAKVMGFRSPRIMFRHI FT LPNCLSPILVISTVQIANAIMSEAALSFLGLGLPVDQPSLGSLISIGFNYIFSGSWWIT FT AFPGLVLVALVLVINLLGDWLRDVFNPKIYKG" FT sig_peptide 131168..131320 FT /locus_tag="VSAL_I0097" FT misc_feature order(131252..131320,131480..131548,131567..131635, FT 131663..131722,131831..131899,131996..132064) FT /locus_tag="VSAL_I0097" FT misc_feature 131462..132103 FT /locus_tag="VSAL_I0097" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 1.8e-43" FT /inference="protein motif:HMMPfam:PF00528" FT misc_feature 131753..131839 FT /locus_tag="VSAL_I0097" FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT CDS 132347..133927 FT /transl_table=11 FT /locus_tag="VSAL_I0098" FT /old_locus_tag="TVS3292" FT /product="transporter, BCCT family" FT /note="Similar to Bacillus subtilis Glycine betaine FT transporter OpuD UniProt:P54417 (512 aa) fasta scores: FT E()=4.2e-65, 41.968% id in 498 aa" FT /db_xref="GOA:B6EP57" FT /db_xref="InterPro:IPR000060" FT /db_xref="InterPro:IPR018093" FT /db_xref="UniProtKB/TrEMBL:B6EP57" FT /inference="similar to sequence:UniProt:P54417" FT /protein_id="CAQ77783.1" FT /translation="MSRNKDKYSIDNTDYTVGQDNVQKWGLDIHNTVFGISAGLIALFL FT IAVAVTDPETAKTVLNGLKSQIINAFDGLFMWSANIFVVFCLALIVSPFGKIRLGGDKA FT KPDYSMISWIAMLFAAGMGIGLMFWGVAEPVAYFTGWFGTPLGVEAYTPEARQLALGAT FT MFHWGIHPWAIYGVVALSLAFFSYNKGLPLSMRSIFYPILGDRTWGWPGHIVDILAVLA FT TLFGLATSLGLGAQQAASGFQHVFGIEGGLGLQVAIIFIVTLLAVVSVMRGIDGGVKII FT SNINMIIAIVFVVFVALVTFAVSMGAIPTTIMGYIENIIPLSNPSGRDDEAWMHGWTVT FT YWAWWISWSPFVGMFIARVSRGRTVREFLIAVLVVPTVFTVLWMSTFGGVAIDQVMNNV FT GTLGTDGLTDVSLAMFQMFDALPMGNVLSMIAVVLVLVFFITSSDSGSLVIDSITAGGK FT VDAPIPQRVFWAFMEGAIAVALLWVGGTQAVEALQAGAISTALPFTIILLVMCVSLLMG FT MRTEKHNRS" FT misc_feature order(132431..132499,132563..132631,132668..132736, FT 132842..132910,132971..133039,133082..133150, FT 133187..133255,133343..133411,133448..133516, FT 133598..133666,133745..133813,133826..133894) FT /locus_tag="VSAL_I0098" FT misc_feature 132443..133909 FT /locus_tag="VSAL_I0098" FT /note="HMMPfam hit to PF02028, BCCT family FT transporter,score 8.4e-173" FT /inference="protein motif:HMMPfam:PF02028" FT misc_feature 133352..133381 FT /locus_tag="VSAL_I0098" FT /note="PS01303 BCCT family of transporters signature." FT /inference="protein motif:ProSite:PS01303" FT CDS complement(134012..134728) FT /transl_table=11 FT /locus_tag="VSAL_I0099" FT /old_locus_tag="TVS3291" FT /product="putative exonuclease" FT /db_xref="GOA:B6EP58" FT /db_xref="InterPro:IPR006055" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR013520" FT /db_xref="UniProtKB/TrEMBL:B6EP58" FT /protein_id="CAQ77784.1" FT /translation="MISNTHQEILNWTAFFTHKYEASKDQRLKNFYQTGTYEEETPLKE FT IEFVALDFETTGLDANQNSIISIGLVPFTLERIRCRESQHWFVKAQDSLEENSVVIHGI FT THSDLQGAPDLRRILEKVLDALAGKVVVVHYRKIERDFFDINLRNLIGEGIVFPIVDTM FT QIEGDFQQEQAKGLINWIKGKRPESIRLANSRSRYGLPAYAPHHALTDAIATAELFQAQ FT IRYHFSENDPIRKIWQ" FT misc_feature complement(134072..134587) FT /locus_tag="VSAL_I0099" FT /note="HMMPfam hit to PF00929, Exonuclease, score 9.3e-10" FT /inference="protein motif:HMMPfam:PF00929" FT CDS complement(134738..136618) FT /transl_table=11 FT /locus_tag="VSAL_I0100" FT /old_locus_tag="TVS3290" FT /product="putative cyclic nucleotide binding protein" FT /db_xref="GOA:B6EP59" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR005105" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018490" FT /db_xref="InterPro:IPR018821" FT /db_xref="UniProtKB/TrEMBL:B6EP59" FT /protein_id="CAQ77785.1" FT /translation="MEVELLEIQHFLSQYPPFSLLPEEAIKEAAQSVEISYYRAESMVI FT GFGDEIKDLYMVRSGIIEVYRRNGELYNRLDQGSIFGQMGLLMNNKVRFPAKALKDSLL FT YCIPESVFDDYCERYDEFSDFVEVEDATRLKQAVESNHDDANDLTTSKVKTLLTREAVM FT ITKYETIQSAAKTMAEENVSAVLITDPEINTDEEDNDFVGIITDRDLCTKVLACGLDFD FT TPVSEVMSTELISLDHNAYVFEAMLMMLRYNVHHLPVLRNKQPIGVLEVSDIVRYESQN FT SLLFVSSIFQQQTIEDLVILSAQLKDCFVRMVNEDANSHMVGSAMSEIGRSFKQRLLEL FT AEEELGHPPVPYCFLALGSMARDEQLIVTDQDNAIILDNDYNEAEHGDYFKALSAFVCD FT GLAACGYTYCTGDIMATNPEWRKTQSEWEECFADWIDNPDPQALLNSSIFFDLNGVYGR FT TKWAEQLNGFIVRRAKKNNRFLACLARNGLRRTPPLGFFKDFVMEKDGRHNNSINLKRR FT GTAPLADLIRVHALAIGSQAQNSFERLDDIIEAGILPKSKGGDLHHAMELISLVRLRHQ FT ALDVEANIEPDNNIEPENMSDFERRNLKDAFQVLSNAQNFLKFRYSASKF" FT misc_feature complement(134741..135712) FT /locus_tag="VSAL_I0100" FT /note="HMMPfam hit to PF03445, Putative FT nucleotidyltransferase DUF294, score 4e-114" FT /inference="protein motif:HMMPfam:PF03445" FT misc_feature complement(135782..136156) FT /locus_tag="VSAL_I0100" FT /note="HMMPfam hit to PF00571, CBS domain pair, score FT 3e-29" FT /inference="protein motif:HMMPfam:PF00571" FT misc_feature complement(136256..136516) FT /locus_tag="VSAL_I0100" FT /note="HMMPfam hit to PF00027, Cyclic nucleotide-binding FT domain, score 4e-16" FT /inference="protein motif:HMMPfam:PF00027" FT CDS 136794..137672 FT /transl_table=11 FT /locus_tag="VSAL_I0101" FT /old_locus_tag="TVS3289" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR007730" FT /db_xref="UniProtKB/TrEMBL:B6EP60" FT /protein_id="CAQ77786.1" FT /translation="MTKLINKTALSFIVLSNVVVVTSAYANINLTDYLTTKKSALMSVC FT VPKASTAMNELSESCPIGEGLWGNQSAKHDEGDSEFWIQCGLFRKTIDDAVISRLSEAV FT NAPINMKKEGDLNRCLIGPYLDYTIASKSLAALQRDRLFKLATLREVDLSTIPKPEIIP FT EVVAEPEPAPITIRKAVMINQTHFVVPFSHDTTEGFYMEGKMPWLRATEQHAQEICQRI FT DMNLVTKEQWKILADSTIMKKDKWPMQLPYWGANDLGLFKDGSTKKLKNTSMLNVVCTK FT KTEGDVVGNPI" FT sig_peptide 136794..136871 FT /locus_tag="VSAL_I0101" FT misc_feature 136827..136895 FT /locus_tag="VSAL_I0101" FT CDS 137656..137919 FT /transl_table=11 FT /locus_tag="VSAL_I0102" FT /old_locus_tag="TVS3288" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP61" FT /protein_id="CAQ77787.1" FT /translation="MEIQFKGRWDSKSLAENLQEALETLEEEFGVKALSDITLSICLED FT EHKEELALLSPTGRALELIVINNPRDVNDGEKAPVLEFKPRS" FT CDS complement(137970..139940) FT /transl_table=11 FT /locus_tag="VSAL_I0103" FT /old_locus_tag="TVS3287" FT /product="HTH-type transcriptional regulator" FT /db_xref="GOA:B6EP62" FT /db_xref="InterPro:IPR002178" FT /db_xref="InterPro:IPR007737" FT /db_xref="InterPro:IPR011608" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013011" FT /db_xref="InterPro:IPR013196" FT /db_xref="InterPro:IPR016152" FT /db_xref="UniProtKB/TrEMBL:B6EP62" FT /protein_id="CAQ77788.1" FT /translation="MILLLIRINSLNFGSLMIQLPYPRLNTIFEALRHEPLPQQELAQR FT CDISTRTIRTDISALNDILASYGAQIQHQRGTGYHFDIYDEARFSDIEKQTQKMKTSPR FT NAKDRVVYLIMRLLSQEEECKLDDLANQWFVSRTSLQADMTEIREILEQYNLEIVSKAH FT HGLKLFGEEQAIRACIAHVLFQFKPSDRTFINVCDHFFPEINLPSLKEDLLTLINQNHI FT RLTDEGLHHLLVYCGITLHRVKLNSVIHHVHQPKISNEAQNAALDLSKTIEVLLSAPLP FT QSEIDYLSIQIAARRVTGVTIVDTEKHTEQLELTHFLLDYVNEHYNYDLRNDELLKRDL FT LCHITTMILRVKYQITIPNPLVDHIKRYYPLAYDMTVAAISHWGKHLIPDGEVGYLVMH FT IGVGLERNFALEEQQPPKALLVCDSGTSIMRLLESQLLRSLPQLDIQKIDSVREYESLT FT KVDADFVISTEKVSQKNRPTITISPLPTSFQLEQVNKLILMNRSHPYMLDKFFDQRYFS FT VLSEPTTQAELLKKFTAHFTEDNITPIEFYDSVIERENITSTILGEGIAIPHSLGLLAN FT ETKVYTIISPHGIDWGNGKIAHVIFLFAINKDDYEEAMSLYDLFVTFMNGKAVDTILEC FT LSYEEFQYVAKECWFNRRKDW" FT misc_feature complement(138024..138416) FT /locus_tag="VSAL_I0103" FT /note="HMMPfam hit to PF00359,Phosphoenolpyruvate-dependent FT sugar phosph, score 0.0019" FT /inference="protein motif:HMMPfam:PF00359" FT misc_feature complement(138732..138995) FT /locus_tag="VSAL_I0103" FT /note="HMMPfam hit to PF00874, PRD domain, score 4.6e-10" FT /inference="protein motif:HMMPfam:PF00874" FT misc_feature complement(139389..139688) FT /locus_tag="VSAL_I0103" FT /note="HMMPfam hit to PF05043, Mga helix-turn-helix domain, FT score 4.2e-06" FT /inference="protein motif:HMMPfam:PF05043" FT misc_feature complement(139440..139616) FT /locus_tag="VSAL_I0103" FT /note="HMMPfam hit to PF08279, HTH domain, score 0.00019" FT /inference="protein motif:HMMPfam:PF08279" FT misc_feature complement(139701..139871) FT /locus_tag="VSAL_I0103" FT /note="HMMPfam hit to PF08279, HTH domain, score 4.1e-12" FT /inference="protein motif:HMMPfam:PF08279" FT misc_feature complement(139767..139832) FT /locus_tag="VSAL_I0103" FT /note="Predicted helix-turn-helix motif with score FT 1735.000, SD 5.10 at aa 37-58, sequence FT LPQQELAQRCDISTRTIRTDIS" FT CDS complement(140087..140827) FT /transl_table=11 FT /locus_tag="VSAL_I0104" FT /old_locus_tag="TVS3286" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR010763" FT /db_xref="UniProtKB/TrEMBL:B6EP63" FT /protein_id="CAQ77789.1" FT /translation="MTLKANFYKNRVCLNVLAGSVDNAGEIYNAAEGHVLVGVLSKNYP FT DVDTAVTDMKKYSEVTNNAVSVGLGAGDPNQSMMVSLISQHVQPQHINQVFTGVATSRA FT LVGQDKSIVNGLISPTGTVGMVKISTGPLSSRSEDAIVPVETAIAMLKDMGGSSVKYFP FT MGGLESREEFAYVAKACAEQDFWLEPTGGIDLENYEEIMQIALDAGVSKIIPHIYSSII FT DKATGNSRPTDVTTLLEMTKKLLN" FT misc_feature complement(140153..140806) FT /locus_tag="VSAL_I0104" FT /note="HMMPfam hit to PF07071, Protein of unknown function FT (DUF1341), score 6e-144" FT /inference="protein motif:HMMPfam:PF07071" FT CDS complement(140840..141886) FT /transl_table=11 FT /locus_tag="VSAL_I0105" FT /old_locus_tag="TVS3285" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EP64" FT /db_xref="InterPro:IPR006337" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR018319" FT /db_xref="UniProtKB/TrEMBL:B6EP64" FT /protein_id="CAQ77790.1" FT /translation="MTALGVSTPNEDVVNAVTEGLGQYFDMKDLVIKTGEYIANLLNVD FT AAVVVSCASAGIAQSVAAVIVKDSQYRLENLHAHAHDVPSEIVLPKGHNVNFGAPVGTM FT VTLGGGTIKEAGYANECSAEQLEAAITKNTAAILYIKSHHCVQKSILTVEQAVAVAQKH FT DLPLIVDAAAEEDLQGYFAMGADLVIYSGTKAIEGPTSGLVVGKTHYINWVRKQSQGIG FT RAMKVGKEGILGLTHAITDYLTVEKESGQEMVAKMETFISDINSINGVKSRVVWDSAGR FT DIARAEIAFDHDELQTTTTDIVKQLQNGNPAVYCRGYKANEGIIEIDVRSVNSTQLNTI FT FLKINALF" FT misc_feature complement(141029..141802) FT /locus_tag="VSAL_I0105" FT /note="HMMPfam hit to PF01212, Beta-eliminating lyase,score FT 7.3e-05" FT /inference="protein motif:HMMPfam:PF01212" FT CDS complement(141927..143063) FT /transl_table=11 FT /locus_tag="VSAL_I0106" FT /old_locus_tag="TVS3284" FT /product="hypothetical protein" FT /db_xref="GOA:B6EP65" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="InterPro:IPR020043" FT /db_xref="UniProtKB/TrEMBL:B6EP65" FT /protein_id="CAQ77791.1" FT /translation="MYDLLIKNGKLVNGGLVDVAILNEKIARVESDINDAAIRTVDLKG FT LHFLSAGWIDSHTHCYPSSPIYNDEPDLIGVTHGVTTVVDAGSVGADDVDDFYRLTQQS FT ATNVYSILNISRIGLLRQDELADMSDISLDAAKTAITKHSDFVVGIKARMSGSVVKNNG FT LAPLIRAKEMQAQNNNLPLMVHVGNNPPNLDDIAELLTKGDIITHCYNGKPNRILTPEG FT ELKESMKKAIKRGVILDVGHGGASFSFDVAEQAIKKGIYPDTISSDIYCKNRISGPVRS FT LSHIMSKFLSIGLPMDRVIDCVTINAANALKMETKGTLEIGQDADITIFNIHHEACTFE FT DSEQGTRQGEESFLPLASIVAGKLITTQHGEQTNVFNS" FT misc_feature complement(142071..142922) FT /locus_tag="VSAL_I0106" FT /note="HMMPfam hit to PF01979, Amidohydrolase family,score FT 0.00049" FT /inference="protein motif:HMMPfam:PF01979" FT CDS complement(143122..143772) FT /transl_table=11 FT /locus_tag="VSAL_I0107" FT /old_locus_tag="TVS3283" FT /product="membrane protein" FT /db_xref="InterPro:IPR020041" FT /db_xref="UniProtKB/TrEMBL:B6EP66" FT /protein_id="CAQ77792.1" FT /translation="MDDKLKNNFWYADWSFPFFVGLLSSGVFAGTHMYYLYGIGAFNEV FT AFVSMLRAGMDTGVYGAVAAFGASFLFARIIEGSLVGILDIGGAIQTGVGLGVPALLLG FT AGIVYPLENFIASLIVGFLLGVAIGYIIILARKYTVGQSNSTYGADVMMGAGNSSGRFL FT GPLIVLSAIAASIPIGIGSLIGALAFYQWKKPITGGAIIGAMVFGSLFPVAIG" FT misc_feature complement(order(143128..143187,143206..143274, FT 143368..143436,143449..143517,143545..143604, FT 143662..143730)) FT /locus_tag="VSAL_I0107" FT CDS complement(143787..144566) FT /transl_table=11 FT /locus_tag="VSAL_I0108" FT /old_locus_tag="TVS3282" FT /product="membrane protein" FT /db_xref="InterPro:IPR020042" FT /db_xref="UniProtKB/TrEMBL:B6EP67" FT /protein_id="CAQ77793.1" FT /translation="MFLIILMKSLIIGALVGVGVGVGAARMFHAPTVQGMGAFRTLGEL FT NSCEGDPASHFSFGLGFFFNAWASSVAAGAFTQDVDHRIIPHWGAAALMFKNKNVAETM FT HDPKKMGIACGIIGMVVVAFLNSTASAVPESLQITAVKVLVPAANLLVNIAMPVIFWLA FT AIDAGRRSGFWATIFGGLAQMIMGNAVPGLVLGILIGKGVEDGGWNKVTKIMLAAVITL FT FVMSAFFRGFDLELIESFRLTVPTWLESVHTTLSGNQ" FT misc_feature complement(order(143871..143927,143970..144038, FT 144072..144140,144168..144236,144336..144404, FT 144495..144563)) FT /locus_tag="VSAL_I0108" FT sig_peptide complement(144477..144566) FT /locus_tag="VSAL_I0108" FT CDS complement(144627..144923) FT /transl_table=11 FT /locus_tag="VSAL_I0109" FT /old_locus_tag="TVS3281" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR020037" FT /db_xref="UniProtKB/TrEMBL:B6EP68" FT /protein_id="CAQ77794.1" FT /translation="MKESITTTVTVSGNGNTKQAAFSSALNNIQKTILKDNEQVILRIE FT PVDVKLINAEKKERIEKFMFFFLPRNKTSYSVTLDVTVNVTIINIDQLDFKSI" FT CDS complement(144926..145288) FT /transl_table=11 FT /locus_tag="VSAL_I0110" FT /old_locus_tag="TVS3280" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR020034" FT /db_xref="UniProtKB/TrEMBL:B6EP69" FT /protein_id="CAQ77795.1" FT /translation="MTNIKVVIGDRLGKGQKVGLGVEAAGGSVTVIPGMAADMKLGDVM FT NEEQADFGISFCGSGGAGAITAQNKYGYKAKYGMRSVEEGVTAINEGFNVLGFGFMDKE FT ELGQRLVEAFVKKYRS" FT CDS complement(145290..145637) FT /transl_table=11 FT /locus_tag="VSAL_I0111" FT /old_locus_tag="TVS3279" FT /product="hypothetical protein" FT /db_xref="GOA:B6EP70" FT /db_xref="InterPro:IPR011608" FT /db_xref="InterPro:IPR020044" FT /db_xref="UniProtKB/TrEMBL:B6EP70" FT /protein_id="CAQ77796.1" FT /translation="MDSNTLDINEELFTEEVDSTFNKVISILRAENIFPDSVQKQMLFS FT HLKAMVIRSHTHESLPEVEIEMFDEISKSSHKLAEDVVSLFPTLAYEESYLLSVHFEVA FT KENELTEELGA" FT repeat_region 145806..146810 FT /note="VSa6" FT repeat_region 145806..145824 FT /note="IR of VSa6" FT CDS 145902..146783 FT /transl_table=11 FT /locus_tag="VSAL_I0112" FT /old_locus_tag="TVS3278" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EJM9" FT /protein_id="CAQ77797.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSHTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 146229..146723 FT /locus_tag="VSAL_I0112" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 146792..146810 FT /note="IR of VSa6" FT repeat_region 146823..149137 FT /note="VSa2" FT repeat_region 146823..146846 FT /note="IR of VSa2" FT CDS 146904..147218 FT /transl_table=11 FT /locus_tag="VSAL_I0113" FT /old_locus_tag="TVS3277" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77798.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 147215..147562 FT /transl_table=11 FT /locus_tag="VSAL_I0114" FT /old_locus_tag="TVSb0156" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77799.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 147634..149121 FT /transl_table=11 FT /locus_tag="VSAL_I0115" FT /old_locus_tag="TVSb0155" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EGR2" FT /protein_id="CAQ77800.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 149114..149137 FT /note="IR of VSa2" FT CDS complement(149312..151027) FT /transl_table=11 FT /locus_tag="VSAL_I0116" FT /old_locus_tag="TVS3273" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP75" FT /protein_id="CAQ77801.1" FT /translation="MGCGSSDDDSNDPSTNIDTAKTQKPSIAIPTAGKFIDAKVIGLDY FT ISGSLEEKKTDINGTYTIDTNNPEISFYLGGKDGLFIGSISGRHITTPFEAAGTYQRAV FT NLARLLLTVGEGTSTLIKTGQAVLIKEITLPQDLSVAATELKEATLDDEASLLAVATAL FT NPAITALVSQDDATTHMQSSLANIPRGSDVNLSHWSRGSNWTFVSRDSTQRIRNSANQE FT FDLVINVDRTLTDSQGNPRNLFEKTSSMIFTLADNNLIVRKGSNDSSISGHYVADYLTC FT LDNDGIFNTVETDDNEYNTCDGNRITVTDERYNYFYNLDNKYQYSFISPNKEQISDINE FT PWIEISEMGDAFECMNAKNCTEQALSKFEVLERDDSDEQDGSYMLEETISGTYDPITDV FT YINTTSKKYLDNSPYPGRISERISFLYPVEALGQDRYVDFIGTWESRELCANKSIAVAK FT MTFTETGLTMTGEECGTLGFINKTHTYAQLSPKDLWWFGTNDAGDSKATLDQLNSTVRW FT NDKNSTDDPNNIKINRFTYIPAGKNWDQGLLIRDTLNLDGTKKSTITMKKIKSL" FT CDS complement(151287..151856) FT /transl_table=11 FT /locus_tag="VSAL_I0117" FT /old_locus_tag="TVS3272" FT /product="putative RNA polymerase sigma factor" FT /db_xref="GOA:B6EP76" FT /db_xref="InterPro:IPR011517" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:B6EP76" FT /protein_id="CAQ77802.1" FT /translation="MITITKLTRTIQYWQSGDKVAENHVYQFAYLQLHNIAQKERKRNA FT KKYGPDNDMFADSVNNTTSLIHDAYIKLSNSKLTDIKTKRDFFLMITRVMRQILIDNAR FT SLQAKKRQPLAPINRDIDKFEQLITMDKALDNFAIRYPRQSNVLKLKYLMGMKNTEICQ FT LLECSSSLVEKDLKFSRCWLHSYIMK" FT misc_feature complement(151290..151847) FT /locus_tag="VSAL_I0117" FT /note="HMMPfam hit to PF07638, ECF sigma factor, score FT 1.3e-12" FT /inference="protein motif:HMMPfam:PF07638" FT CDS complement(151960..153300) FT /transl_table=11 FT /locus_tag="VSAL_I0118" FT /old_locus_tag="TVS3271" FT /product="putative protein kinase" FT /db_xref="GOA:B6EP77" FT /db_xref="InterPro:IPR000719" FT /db_xref="InterPro:IPR008271" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR017441" FT /db_xref="InterPro:IPR017442" FT /db_xref="UniProtKB/TrEMBL:B6EP77" FT /protein_id="CAQ77803.1" FT /translation="MQLITSPTQIFYDLMDLDNIQKQKVLDALQNSHPNIYQDLIPLLN FT NTTSEPFFDLFGFGAQQTFNTEWDFSHHMVDKYQITKELGRGGMGVVYSAYRANGTFEQ FT ELAIKFIQPDLKNLLNKHALFEEAQLLARLNHPYIAKVFDGGEYEGAVYVVMEKIIGTT FT LNDFLKHNLLSRQQKLQLFSQICQALEHAHQHDVLHADLKPENILIDKRNCPKLIDFNL FT TQQVKKNGHHNTQGLVAYSEHFASPEQKEGNYLTPLSDVYSLGKILLLLFPNLHKKEDI FT TYIQEKTTQETLSKRYCSVEALRKDIECVLASRPITLKQHTPLYTFRCLLKRKPISAFI FT LVLLTLSTLILSSVLIIKNNNLKHDKIVSEKIMFEITHLLFNSKGKDISKASINSMLEL FT TRCKILSNPELPAYIKQKMQLAMMMPIQTKQKSLPEEQRREIKIQFK" FT misc_feature complement(152230..152298) FT /locus_tag="VSAL_I0118" FT misc_feature complement(152353..153069) FT /locus_tag="VSAL_I0118" FT /note="HMMPfam hit to PF00069, Protein kinase domain,score FT 1e-25" FT /inference="protein motif:HMMPfam:PF00069" FT misc_feature complement(152674..152712) FT /locus_tag="VSAL_I0118" FT /note="PS00108 Serine/Threonine protein kinases active-site FT signature." FT /inference="protein motif:ProSite:PS00108" FT misc_feature complement(152974..153051) FT /locus_tag="VSAL_I0118" FT /note="PS00107 Protein kinases ATP-binding region FT signature." FT /inference="protein motif:ProSite:PS00107" FT CDS 153609..154199 FT /transl_table=11 FT /locus_tag="VSAL_I0119" FT /old_locus_tag="TVS3270" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP78" FT /protein_id="CAQ77804.1" FT /translation="MTAHHHPHFQVGQTIEDHPFRQGDGAMLEMFRNDLPNILYVGLGN FT ITADEQAVLGQESAQLGMTMTNEGACLTVFSLGELTFEMQFNAAVIPEEYFQSPESGKL FT SFSMLAIDSATNTLQAIREFTLSEELSRQFVEVMQIQRKINDVNVVNRVNEMLLNTLTT FT EELNEKITLEPLQSVVAAPTCGCGHHHNHDHSH" FT CDS complement(154286..155641) FT /transl_table=11 FT /gene="gor" FT /locus_tag="VSAL_I0120" FT /old_locus_tag="TVS3269" FT /product="glutathione reductase" FT /EC_number="1.8.1.7" FT /db_xref="GOA:B6EP79" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR006322" FT /db_xref="InterPro:IPR012999" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016156" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:B6EP79" FT /protein_id="CAQ77805.1" FT /translation="MATHFDYICIGGGSGGIASANRAAMHGAKVALIEAQELGGTCVNV FT GCVPKKVMWHGAQVAEAINLYAEDYGFDVELKKFNWSKMVENRQAYIGRIHESYDRVLG FT NNKINVIKGFAKFVDANTVEVNGEHYTADHILIAVGGRPTIPNIPGAEHGIDSNGFFDI FT TEQPKRVAIIGAGYIAVEIAGVLHSLGTETHLFVRKESPLRSFDPMIIDTLVEVMNTEG FT PTLHTHSVPKEVVKEADGSLTLHLENGETQNVDTLIWAIGRHPATDAINLEKTGVAIND FT RGYIKVDEYQSTNVKGIYCVGDIMEGGIELTPIAVKAGRLLSERLFNGQTNAKMDYTLV FT PTVVFSHPPIGTIGLTEQEADEQYGKDNVKVYTSGFTAMYTAVTKHRQPCKMKLVCAGE FT NEKVVGLHGIGFTVDEMIQGFAVAMKMGATKADFDAVVAIHPTGSEEFVTMR" FT misc_feature complement(154289..154624) FT /gene="gor" FT /locus_tag="VSAL_I0120" FT /note="HMMPfam hit to PF02852, Pyridine FT nucleotide-disulphide oxidored, score 2.6e-52" FT /inference="protein motif:HMMPfam:PF02852" FT misc_feature complement(154715..155626) FT /gene="gor" FT /locus_tag="VSAL_I0120" FT /note="HMMPfam hit to PF07992, Pyridine FT nucleotide-disulphide oxidored, score 5.8e-69" FT /inference="protein motif:HMMPfam:PF07992" FT misc_feature complement(154856..155137) FT /gene="gor" FT /locus_tag="VSAL_I0120" FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidored, score 3.5e-28" FT /inference="protein motif:HMMPfam:PF00070" FT misc_feature complement(155495..155527) FT /gene="gor" FT /locus_tag="VSAL_I0120" FT /note="PS00076 Pyridine nucleotide-disulphide FT oxidoreductases class-I active site." FT /inference="protein motif:ProSite:PS00076" FT CDS complement(155854..156693) FT /transl_table=11 FT /locus_tag="VSAL_I0121" FT /old_locus_tag="TVS3268" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EP80" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR007473" FT /db_xref="UniProtKB/TrEMBL:B6EP80" FT /protein_id="CAQ77806.1" FT /translation="MLSYRHSFHAGNHADVVKHIVQSLILNSLTLKDKPFVYHDTHSGV FT GRYDLTHEWSEKTGEYKQGIERIWDKTDIPEEITSYLDAVKALNEDGELRYYPGSPCVG FT RAHIRCYDRMVLTELHPSDYPLLEQEFHSDRQVSIYKEDGFARLKASLPPPERRGLVLI FT DPPYELAKEYYDVVNAIGQSHKRWATGIYAIWYPVVNRCDIDDMINGLKKLNIRNILQI FT ELGVSPDTNERGMTASGMIVINPPWKLESQMNTILPFLKEAIAPATGHCKVEWIVPE" FT misc_feature complement(155863..156597) FT /locus_tag="VSAL_I0121" FT /note="HMMPfam hit to PF04378, Protein of unknown function FT (DUF519), score 1.4e-155" FT /inference="protein motif:HMMPfam:PF04378" FT misc_feature complement(155953..155973) FT /locus_tag="VSAL_I0121" FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT misc_feature complement(156193..156213) FT /locus_tag="VSAL_I0121" FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT CDS 156846..158888 FT /transl_table=11 FT /gene="prlC" FT /locus_tag="VSAL_I0122" FT /old_locus_tag="TVS3267" FT /product="oligopeptidase A" FT /EC_number="3.4.24.70" FT /db_xref="GOA:B6EP81" FT /db_xref="InterPro:IPR001567" FT /db_xref="InterPro:IPR024077" FT /db_xref="InterPro:IPR024079" FT /db_xref="InterPro:IPR024080" FT /db_xref="UniProtKB/TrEMBL:B6EP81" FT /protein_id="CAQ77807.1" FT /translation="MSNPLLTFTDLPLFSQIKPEHIQPAVEQAIADCRAKIEDVLASDA FT VPSWNSIIVPLAETDDRLSRIWSPVSHLNSVQNSEALREAYEACLPILSEYGTWVGQNK FT ALYHAYKEIKASADFSALSQAQQKTIIDELRDFELSGIGLPADQQKRYGDISKRTSELS FT SNFSNNVLDATMGWSKHITDEAELSGLPESAMSAAKAAAEAKELDGWLLTLEMPSYIPV FT MTYSDNKPLRREIYEAFVTRASDRGPNAGKWDNTDLISEELNLRHEVSRLLGFSSYSEK FT SLATKMAESPTQVLGFLNDLAAKAKPQGEREVAELKAFVKEEFDIDELDLWDVTYYSEK FT LKQKLYQISDEELRPYFPESKAVSGLFEVLNRVFGMTVVEREGVDVWHESVRFFDIFDS FT TNTLRGSFYLDLYAREHKRGGAWMDECRVRRLTENGELQTPVAYLTCNFSKPVGGKPAL FT FTHDEVVTLFHEFGHGIHHMLTQIDVASVSGINGVPWDAVELPSQFLENWCYEEEALAF FT ISGHYETGEPLPKEMLDKMLAAKNFQSAMFILRQLEFGMFDFTLHTNYDPDLGAKVLET FT LAEVKAKVAVLPSVEWNRFSHSFSHIFAGGYGAGYYSYLWAEVLSADAFSRFEEEGIFN FT TETGQSFLNNILEMGGSEEPMELFKRFRGREPQVDAMLRHAGIGA" FT misc_feature 157380..157445 FT /gene="prlC" FT /locus_tag="VSAL_I0122" FT /note="Predicted helix-turn-helix motif with score FT 1024.000, SD 2.67 at aa 181-202, sequence FT KHITDEAELSGLPESAMSAAKA" FT misc_feature 157509..158879 FT /gene="prlC" FT /locus_tag="VSAL_I0122" FT /note="HMMPfam hit to PF01432, Peptidase family M3, score FT 3.3e-219" FT /inference="protein motif:HMMPfam:PF01432" FT misc_feature 158241..158270 FT /gene="prlC" FT /locus_tag="VSAL_I0122" FT /note="PS00142 Neutral zinc metallopeptidases,zinc-binding FT region signature." FT /inference="protein motif:ProSite:PS00142" FT CDS complement(158962..160401) FT /transl_table=11 FT /locus_tag="VSAL_I0123" FT /old_locus_tag="TVS3266" FT /product="putative exported peptidase" FT /db_xref="GOA:B6EP82" FT /db_xref="InterPro:IPR001915" FT /db_xref="UniProtKB/TrEMBL:B6EP82" FT /protein_id="CAQ77808.1" FT /translation="MPMKSISNITKITGMTLISLSISACSISPNYDKSVGEKNSLVIEQ FT QMGIYQNESLDQYVKQVGARLVSHLDSPQFDFKFEIVDDPIPNAFALPGGYIYISRGLL FT TLMNNEDELACVLAHEIIHVTERHSIQQMKRSILPGITQLPGNIVGSVINEDLGNLINT FT PFTFSNDLLMANYSRSHETESDELGVNLAAKSGYNPMAMGVILARINDAIEFKTQTETE FT KSYFDSHPYTPERVKHVDLSASALRVIPQKPIKPNFLYNLNELVVGDNPENGVFSESTF FT IQPTMGFTIIFPKEWQTVNQPQVVAAINETHDGFVALSVSDPQYTAEQTAHRFSQYLEL FT KYHYLAPVNTVELTWGATMYNVQLTDKEGKQDTFITQYWLDLNDITYQVLTLSTAKNKS FT EVSISALSLQPITDAQIAAITQKEIAITTVIKGESVNELTKRNHSDLSAEETAIWNGLE FT ENTPLHQGDEVKIVVTKPYKK" FT misc_feature complement(159570..159589) FT /locus_tag="VSAL_I0123" FT /note="HMMPfam hit to PF02743, Cache domain, score 3.4e-21" FT /inference="protein motif:HMMPfam:PF02743" FT misc_feature complement(159670..160218) FT /locus_tag="VSAL_I0123" FT /note="HMMPfam hit to PF01435, Peptidase family M48, score FT 2.7e-27" FT /inference="protein motif:HMMPfam:PF01435" FT sig_peptide complement(160324..160401) FT /locus_tag="VSAL_I0123" FT CDS complement(160523..160837) FT /transl_table=11 FT /gene="cyaY" FT /locus_tag="VSAL_I0124" FT /old_locus_tag="TVS3265" FT /product="protein CyaY" FT /db_xref="InterPro:IPR002908" FT /db_xref="InterPro:IPR020895" FT /db_xref="UniProtKB/Swiss-Prot:B6EP83" FT /protein_id="CAQ77809.1" FT /translation="MNNTEFHELVDAKLQLLEDMIDDSGADIEPIITGNVLTLEFENRS FT QIVINKQEPMHEIWLASKSGGFHFAYTDEKWTCSKTGVEFIEMVKEECQKHADEVIQWA FT " FT misc_feature complement(160526..160837) FT /gene="cyaY" FT /locus_tag="VSAL_I0124" FT /note="HMMPfam hit to PF01491, Frataxin-like domain, score FT 1.2e-39" FT /inference="protein motif:HMMPfam:PF01491" FT CDS 161114..162367 FT /transl_table=11 FT /gene="lysA" FT /locus_tag="VSAL_I0125" FT /old_locus_tag="TVS3264" FT /product="diaminopimelate decarboxylase" FT /EC_number="4.1.1.20" FT /db_xref="GOA:B6EP84" FT /db_xref="InterPro:IPR000183" FT /db_xref="InterPro:IPR002986" FT /db_xref="InterPro:IPR009006" FT /db_xref="InterPro:IPR022643" FT /db_xref="InterPro:IPR022644" FT /db_xref="InterPro:IPR022653" FT /db_xref="UniProtKB/TrEMBL:B6EP84" FT /protein_id="CAQ77810.1" FT /translation="MDYFNYKDDGQLWAEERPITQLAEQYGTPLYVYSRATLERHWNAF FT DSSVGEQPHLVCYAVKANSNIGVLNALACLGSGFDIVSQGELERVVAAGGDPTKVVFSG FT VGKTAKEMRRALELNIKCFNVESEPELERLNAVAEEMGVIAPISLRINPDVDAKTHPYI FT STGLRDNKFGIAFDRAPEVYKFAQTLPNLNIQGIDCHIGSQLTDITPFIDATDRLLALI FT DDLKAQGVNIRHLDVGGGLGVVYRDELPPQPSEYATALLSRLTGREDLELIFEPGRAIA FT ANAGILVTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVPVVPREGEAQSYDLV FT GPICETGDFLGKDRDLVLEANDLLAVRSSGAYGFVMSSNYNTRTRAAEIMVDGDQVHLV FT RKREELSSLWELESILPN" FT misc_feature 161213..161962 FT /gene="lysA" FT /locus_tag="VSAL_I0125" FT /note="HMMPfam hit to PF02784, Pyridoxal-dependent FT decarboxylase, py, score 1.7e-102" FT /inference="protein motif:HMMPfam:PF02784" FT misc_feature 161285..161341 FT /gene="lysA" FT /locus_tag="VSAL_I0125" FT /note="PS00878 Orn/DAP/Arg decarboxylases family 2 FT pyridoxal-P attachment site." FT /inference="protein motif:ProSite:PS00878" FT misc_feature 161798..161839 FT /gene="lysA" FT /locus_tag="VSAL_I0125" FT /note="PS00879 Orn/DAP/Arg decarboxylases family 2 FT signature 2." FT /inference="protein motif:ProSite:PS00879" FT misc_feature 161969..162286 FT /gene="lysA" FT /locus_tag="VSAL_I0125" FT /note="HMMPfam hit to PF00278, Pyridoxal-dependent FT decarboxylase, C-, score 8.9e-33" FT /inference="protein motif:HMMPfam:PF00278" FT CDS 162449..163279 FT /transl_table=11 FT /gene="dapF" FT /locus_tag="VSAL_I0126" FT /old_locus_tag="TVS3263" FT /product="diaminopimelate epimerase" FT /EC_number="5.1.1.7" FT /db_xref="GOA:B6EP85" FT /db_xref="InterPro:IPR001653" FT /db_xref="InterPro:IPR018510" FT /db_xref="UniProtKB/Swiss-Prot:B6EP85" FT /protein_id="CAQ77811.1" FT /translation="MHFHFSKMHGLGNDFMVVDCLTQNIFFSPDLIRRLADRNRGIGFD FT QLLVVEAPYDPETDFHYRIFNSDGTEVEQCGNGARCFARFVRMKGLTNRTTILVSTKKG FT KMSLKVEDDDQITVNMGEPQFEPNKIPFKATQAEKTYLLRAEDKTLFCGAVSMGNPHCV FT TVVDDVDNYDVDKYGPLVEGHERFPERVNAGFMEIVSPSEIKLRVYERGAGETQACGSG FT ACAAVAVGIMQELLEEDVKVSLPGGDLRIVWQGPGKPLFMTGPATHVYDGQLSI" FT misc_feature 162461..162826 FT /gene="dapF" FT /locus_tag="VSAL_I0126" FT /note="HMMPfam hit to PF01678, Diaminopimelate FT epimerase,score 4.3e-50" FT /inference="protein motif:HMMPfam:PF01678" FT misc_feature 162905..163255 FT /gene="dapF" FT /locus_tag="VSAL_I0126" FT /note="HMMPfam hit to PF01678, Diaminopimelate FT epimerase,score 1.9e-47" FT /inference="protein motif:HMMPfam:PF01678" FT CDS 163276..163977 FT /transl_table=11 FT /locus_tag="VSAL_I0127" FT /old_locus_tag="TVS3262" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007435" FT /db_xref="UniProtKB/TrEMBL:B6EP86" FT /protein_id="CAQ77812.1" FT /translation="MNEVTPIEPQPTQLTEDVVAQFLMDHPDFFQQHPELLGRIKVDTP FT ERGVVSLVEVQVSKLRNRIGDLEEEITQLMSLAAKNDRLFHDFADVQKQLLMCESFDQA FT AKIIEQKAVVLNLTAYIKIIDHAHPKYNVDKTALDNFMKKFLNGRSAYLGRLRQTERDS FT LLAYGGLNTSSSELGSFSVLPLGQSTPMGIMAFASRDGGHFQPNMDTLFLEQLVSVFHY FT LLTQWSKAHNE" FT misc_feature 163297..163962 FT /locus_tag="VSAL_I0127" FT /note="HMMPfam hit to PF04340, Protein of unknown function, FT DUF484, score 3.5e-59" FT /inference="protein motif:HMMPfam:PF04340" FT CDS 163970..164881 FT /transl_table=11 FT /gene="xerC" FT /locus_tag="VSAL_I0128" FT /old_locus_tag="TVS3261" FT /product="tyrosine recombinase XerC" FT /db_xref="GOA:B6EP87" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR011931" FT /db_xref="InterPro:IPR013762" FT /db_xref="InterPro:IPR023009" FT /db_xref="InterPro:IPR023109" FT /db_xref="UniProtKB/TrEMBL:B6EP87" FT /protein_id="CAQ77813.1" FT /translation="MSESLPPQYEKHLTAFYEFLRNEKGLSIYTQRNYKRQLTTIAEQL FT IELGVDSWQDVDAGWVRQITSKGMRSGLKASSLSTRLSSLRSFFDFLVLRNVLQANPAK FT GVSAPRKSRPLPKNIDVDEMGQLLEVNEDDPLSIRDRAMMELMYGAGLRLAELVGIDVR FT DIQLRQGELRVIGKGDKERKVPFSGKAKEWLGHWLQVRNQLANPEEKGLFVSKLGVRIS FT HRNVQKRMAEWGMKQGVNSHISPHKLRHSFATHMLESSGNLRAVQELLGHENISTTQIY FT THLDFQHLAQAYDQAHPRAKKK" FT misc_feature 164006..164257 FT /gene="xerC" FT /locus_tag="VSAL_I0128" FT /note="HMMPfam hit to PF02899, Phage integrase, N-terminal FT SAM-like, score 3.5e-17" FT /inference="protein motif:HMMPfam:PF02899" FT misc_feature 164348..164842 FT /gene="xerC" FT /locus_tag="VSAL_I0128" FT /note="HMMPfam hit to PF00589, Phage integrase family,score FT 4.7e-52" FT /inference="protein motif:HMMPfam:PF00589" FT repeat_region 164969..165558 FT /note="VSa2" FT repeat_region 164969..164992 FT /note="IR of VSa2" FT CDS 165050..165364 FT /transl_table=11 FT /locus_tag="VSAL_I0129" FT /old_locus_tag="TVS3260" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77814.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 165361..165558 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0130" FT /old_locus_tag="TVS3259" FT /product="putative transposase (fragment)" FT /note="Similar to Pseudoalteromonas haloplanktis (strain FT TAC 125) putative orphan protein putative transposase (is66 FT family element,orf2-like). UniProt:Q3IIG1 (EMBL:CR954246) FT (115 aa) fasta scores: E()=1.1e-17, 65.2% id in 66 aa. CDS FT is truncated by the insertion of the downstream IS element FT and subsequent recombination events" FT /inference="similar to sequence:UniProt:Q3IIG1" FT misc_feature 165376..165558 FT /locus_tag="VSAL_I0130" FT /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score FT 3.7e-10" FT /inference="protein motif:HMMPfam:PF05717" FT repeat_region complement(165559..166994) FT /note="VSa9" FT CDS complement(165725..166915) FT /transl_table=11 FT /locus_tag="VSAL_I0131" FT /old_locus_tag="TVS3258" FT /product="transposase" FT /db_xref="GOA:B6EP89" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EP89" FT /protein_id="CAQ77816.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHLS FT VTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYDELDLSSEECPYIHNKTDWS FT RFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLDH FT RTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIEA FT EPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 167270..167860 FT /transl_table=11 FT /locus_tag="VSAL_I0132" FT /old_locus_tag="TVS3257" FT /product="putative lipoprotein" FT /db_xref="UniProtKB/TrEMBL:B6EP90" FT /protein_id="CAQ77817.1" FT /translation="MKKYLFILPLLLVGCDDDDINANNNTDDDVQSVIEKTPELIGLLQ FT SQETINDQFSVLYEQFEPLLDRSDSLTGVDVNNDGIRDDIEAFIEALEVEEPVRNALKQ FT EARYAQENLYYDFTEKTDANINKAMTMGAKYNKVLACKEFRGILIDDNINTGRTIDALT FT YNTKARTMAYLAYNHLQDGAVSTSLNAEAQYCE" FT misc_feature 167282..167314 FT /locus_tag="VSAL_I0132" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 167877..169328 FT /transl_table=11 FT /locus_tag="VSAL_I0133" FT /old_locus_tag="TVS3256" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EP91" FT /protein_id="CAQ77818.1" FT /translation="MIGALLPLNVNANSCKIEGYTIGFFNGVATTKKDAERGRDKIKST FT LDITQYNGEKVEYQLFYNDSYIESNGFNVLADFAETFDQRTQELEQKQFDRWEAFWDIV FT NGKQDSSIIKKISAAFSWFGGFFTDFNSQRSNIIIREFLELLTLSVDSPDTAKTQMQHK FT LINDSNTWQGKKLIYIAHSQGNLWVNKSYNYVVSQLGYDASNIHVVHIAPASPTLSPNS FT DYILSSSDLVINGLNFTGVGSVPPFNTIIAPSSSDIAGHGLIEVYLTHPKSIQKIKSAT FT DKAFASLTKPDMEDVLFSIDYNYTPTFSESHASPEIEFVDNNNNWVKRTDIYSEISYLQ FT RADPNENKYELNPAKDFEPLSFIHNKKDRESQVISIDQCSDIPNNDPFILGEQSNETIR FT YAWDKVPPNTKVSVTVRDRYGVKLQNDEVSINELRPRGHTYQGIFIDLNAINPYTKEEK FT AFIKQQKLETKYELYSDSILFSISS" FT CDS 169900..171447 FT /transl_table=11 FT /locus_tag="VSAL_I0134" FT /old_locus_tag="TVS3255" FT /product="L-2,4-diaminobutyrate decarboxylase" FT /note="Similar to Rhizobium meliloti L-2,4-diaminobutyrate FT decarboxylase, UniProt:Q9Z3R1 (495 aa) fasta scores: FT E()=3e-36, 36.034% id in 469 aa. Expression may be FT regulated by Fur" FT /db_xref="GOA:B6EP92" FT /db_xref="InterPro:IPR002129" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EP92" FT /inference="similar to sequence:UniProt:Q9Z3R1" FT /protein_id="CAQ77819.1" FT /translation="MDTKYFEKNANNDTLFNQSSLLSNVDFFDSSSLDHYKEITELGLN FT TLIKTVKETSHPNSGISPEELKNAFKNIDLDSPLIDINDVVDELDELYLKHAVYFHHKD FT YLAHLNCPVLLTSLLAEQISCAINTAVETWDQSAGGTFIEQKVIDWLAYRIGYLKSADG FT VFTTGGTQSNLMALLLAREQCSTKLDDTKKASLPTNTSKFRILCSEYSHYSIQKAAFVL FT GLGQEAVISVPANAQRQMDPTALSSTLASLVEQGLIPMAVVATAGTTDFGSIDPIEEIA FT SLCQQYQCWLHVDAAYGGVLLISNKFPHLLKSIEQADSVSIDFHKSFFQPLCCSALMVS FT NGQSLSHLTYHADYLNPKHQADNGIPDLANKSLQTSRRFDALKIWLTLRACGPEAIGKL FT FDDLILNTQEVYQRSQHLTDIKFVQEPQLTTLVFRFVDQRLTPTEQDTCNRAIREALSK FT SRRALIAATVVKGRQYLKITMLNPQTPVNSIVAVFEAINTCGHSITEQLLTNVKQSA" FT misc_feature 170086..171207 FT /locus_tag="VSAL_I0134" FT /note="HMMPfam hit to PF00282, Pyridoxal-dependent FT decarboxylase conse, score 2.2e-42" FT /inference="protein motif:HMMPfam:PF00282" FT CDS 171464..172792 FT /transl_table=11 FT /gene="iucD" FT /locus_tag="VSAL_I0135" FT /old_locus_tag="TVS3254" FT /product="siderophore biosynthetis protein" FT /note="Similar to Escherichia coli L-lysine 6-monooxygenase FT IucD UniProt:P11295 (425 aa) fasta scores: E()=7.3e-46, FT 33.021% id in 427 aa" FT /db_xref="UniProtKB/TrEMBL:B6EP93" FT /inference="similar to sequence:UniProt:P11295" FT /protein_id="CAQ77820.1" FT /translation="MNKNIYDILGVGIGPFNLSLAALSSSVPDCKSIFLDARSHFDWHP FT GMMLEGTRLQTPFMSDLVTMADPTNEYSFLNYAKLNDRLYPFYIRENFFLAREEYNHYC FT QWACNRLSNLTFNSCVTHIDYDENEAIYCVKTQNTLLDREETYYCHHLVLGTGTQPYLP FT DFCSKKEPKVTHSAHYLMNKAELKASTCITVVGSGQSAAEIFYDLLTDIDVEKYRLRWL FT TRSPRFFSLEYTKLTLEMTSPEYIDYFHQLEPEQRRVLIQKQKHLYKGINADLINDIYD FT LLYIKQLSHDFTVEMMTNVSVHSLSSEQSQVTLHCLHTETQHNFELQTQHIVMATGYEY FT QLPQFLDGICAHLRFDSHGELDVQRNYSVDRNNKIFVQNVGLHTHGLTSPDLGMVCYRN FT ATILNQVLGRTHYKVEKSIAFQQFSPPNCESHLYNATTEHSLE" FT CDS 172803..175262 FT /transl_table=11 FT /gene="iucC" FT /locus_tag="VSAL_I0136" FT /old_locus_tag="TVS3253" FT /product="siderophore biosynthesis protein" FT /note="Similar to Vibrio hollisae Aerobactin synthetase FT IucC UniProt:Q4H460 (586 aa) fasta scores: FT E()=3.9e-49,30.100% id in 598 aa. Possible alternative FT translational start site after codon 56" FT /db_xref="GOA:B6EP94" FT /db_xref="InterPro:IPR007310" FT /db_xref="InterPro:IPR016181" FT /db_xref="InterPro:IPR022770" FT /db_xref="UniProtKB/TrEMBL:B6EP94" FT /inference="similar to sequence:UniProt:Q4H460" FT /protein_id="CAQ77821.1" FT /translation="MTDFTAKAQCSFTDRYAPKKDQLINISEFEFRNYNEDTDFSVINQ FT WLSQSYSSYWGMNELTEDQRNLELKNTAHKFGLVGLKRGKILFYTELYHPAKDEIGEHY FT PVQEGDCGMHLIIAPVDIPEHRLSQNVITAISSLILEHLPFTRLVVEPDIQNEKVHRLN FT HLIGIEYSQIVPLNSKTAKLGFATKSQFLQSQGKVSSMKNSSKNPSLSLATSHLTTEYW FT HKANQHLIAKMITELSHEQIITPIKLDDASNAQAASWCITFNSDTGTSEYLFRARQYQL FT DHLFVEPQSITCTKDDKNQPLDAVSFILSCRHLLEISDALLPTYLEEITSTLYSKAYKL FT MHQNKTSAQLANASYQEIEAAMTEGHPVFIANNGRIGFDMLDHVEFSPESGQSLNLQWI FT AVLREKTSFAVIESLSYDRLIFDELGQSQLNEFNQQLSMQGLEPSHYYLMPIHPWQWRE FT KISRIFAADIANQYVVPLGTTEDKYQAQQSIRTFFNLSSPEKCYVKTALSILNMGFMRG FT LSPYYMSRTPAINTFIANLIETDPYFAKKQFFVLKEVAAIGYHHSYYEQATRTDNPYKK FT MLSSLWRESPYAPDQHGNVLVNKQQKLLTMASLLHVDDQGKSLISALMADSPLSDHNWL FT KQYMDLYLQPLLHSFFAYDLVFMPHGENLILVLEDNSPIKIIMKDIGEEVAILNGEKTL FT PNDMNCLAVDLEDPMKLNYILLDIFDCIFRFIAPLLEQQTQVSESDFWEIVADSVKDYQ FT QEHPQFDAKYQRYDLYCSSFARTCLNRIQLNNNQQMIDLEDREKNLRFAEDIANPLALF FT AKTHRII" FT misc_feature 173853..175235 FT /gene="iucC" FT /locus_tag="VSAL_I0136" FT /note="HMMPfam hit to PF04183, IucA / IucC family, score FT 9.2e-130" FT /inference="protein motif:HMMPfam:PF04183" FT CDS 175286..177451 FT /transl_table=11 FT /locus_tag="VSAL_I0137" FT /old_locus_tag="TVS3252" FT /product="TonB-dependent iron-siderophore receptor FT precursor" FT /note="Similar to Pseudomonas aeruginosa Ferripyoverdine FT receptor precursor FpvA UniProt:P48632 (815 aa) fasta FT scores: E()=4.5e-83, 36.483% id in 688 aa" FT /db_xref="GOA:B6EP95" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR010105" FT /db_xref="InterPro:IPR010917" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:B6EP95" FT /inference="similar to sequence:UniProt:P48632" FT /protein_id="CAQ77822.1" FT /translation="MTLNTNMTSPKIPTYSLFYGLSCVLTLPVMAEDNDNEAMEVMTIT FT AHKQEIASYKTGETSTSTGMDLSYLETPQSVTAVNEQAMKDQQLNSVVDVMNSVSSVYA FT RPMDNDRYTVSARGMEVSTILYDGVPITYDTRFNYGDNLMDTAIYDRVEVVRGANGLMI FT GAGEPSASINLIRKRPTHDFNANVSVGTGSWNLKRGVVDISGSVNTDESIRARLVAVHQ FT ERDSYLDRYEQKRSTLYGVIEADLTTDTLLTVGTDYQYNEPKGTMAGGLPLFHSDGTRT FT NYSTSATTAPDWASAETTALNSFVSLEHSFNPDWVIKGTYTYGDNSLDFNYLWPKGFPD FT PNTNEGMVPGSINYIDGNRKINNLNLTLKGHFSLFGQDHQMIAGFNNQKMTFENTYYKG FT LNAQSEVGDFTDPNWSYPEPEWSREKSWESTGETKQQGIYVASHINVTDQWSFVLGGRL FT SDWETDMNDFGTLHKNKISNEFTSYVGTTYAITPIVAVYASYSDIFTPQNVKGKNNTYL FT DPIKGKNYETGIKASLLDDQLNLSLNGFNTLQDNLGIKTGDVDPNTGMPIYRGVDGTET FT KGFEFETNGAITDDWNLTLGYTYFKIEDPQGNRLKTDIPNKQLKLFTTYELGDVLEGLQ FT IGGGARWYSSIYKEVSGIPNVGDTKVKQDSYAIYDVMVRYEVNKKLNVNANVKNLFDKE FT YYSQMGIYNQYHAGEPRNISVNVDYQF" FT sig_peptide 175286..175378 FT /locus_tag="VSAL_I0137" FT misc_feature 175487..175798 FT /locus_tag="VSAL_I0137" FT /note="HMMPfam hit to PF07715, TonB-dependent Receptor Plug FT Domain, score 7.7e-16" FT /inference="protein motif:HMMPfam:PF07715" FT misc_feature 176726..177448 FT /locus_tag="VSAL_I0137" FT /note="HMMPfam hit to PF00593, TonB dependent FT receptor,score 7.6e-24" FT /inference="protein motif:HMMPfam:PF00593" FT CDS 177570..178520 FT /transl_table=11 FT /locus_tag="VSAL_I0138" FT /old_locus_tag="TVS3251" FT /product="iron-siderophore ABC transporter, periplasmic FT binding protein" FT /note="Similar to Escherichia coli FT Ferrienterobactin-binding periplasmic protein precursor FT FepB UniProt:P0AEL6 (318 aa) fasta scores: FT E()=4.8e-05,21.908% id in 283 aa" FT /db_xref="GOA:B6EP96" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:B6EP96" FT /inference="similar to sequence:UniProt:P0AEL6" FT /protein_id="CAQ77823.1" FT /translation="MSSHTAAIPLNQISSSPFPVTIKTAHGTAVIPTHPQRVITLGATT FT EDWCLLLGIVPIAIEAHYWGGDSKGYLPWFKQAVLEQEKALPSVLNSYPELDIEHILSL FT KPDLILAPQSGITLETFNQLNSFVPVVAYPDQPWLTPIDKQVTLISTALGKTEEGEALL FT VQLHQYLASLADANPQFKGKKLAYINAGSRFGNLALYVPGDPRIDSLLALGFIQLPEVK FT DIKPTRGHFTANIGLEHSDIFNDADLIISWYESEKSKQAVEKIPLFSHINAVKQGRYLA FT ITDPSIVMATSYGSLLSLEWVMPAFIPKIKEVMGK" FT misc_feature 177672..178424 FT /locus_tag="VSAL_I0138" FT /note="HMMPfam hit to PF01497, Periplasmic binding protein, FT score 7e-07" FT /inference="protein motif:HMMPfam:PF01497" FT CDS 178517..179617 FT /transl_table=11 FT /gene="fepD" FT /locus_tag="VSAL_I0139" FT /old_locus_tag="TVS3250" FT /product="iron-siderophore ABC transporter, membrane FT permease component" FT /db_xref="GOA:B6EP97" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:B6EP97" FT /protein_id="CAQ77824.1" FT /translation="MNNADNQLTSTPDLAILPSLISRNKKVTTTLILLIILSFSAIISG FT LLLGTTTLSPFYLLRLFSENNLNHDTLIIQARLPRVLIGLLAGMSLAMAGCVMQALTRN FT PLADPGLLGVNAGANASIITLSLLSFSANWPLFWLAIPGALLTSVMVYLLSRGHNQSPT FT RLILSGAAISAVLGAYVQARVIVNPSLFSDLKYWMSGSLSGLQLSDINTIWPYFIIATV FT ILLLLAPALNLLSIDRNIAISLGANLRWQPQLGWLGATILCAASTATVGSLTFVGLASA FT HLSRFIAPQDFRWQLPISALIGGNLVVIADVIARTLMPPTELITGIVVAMLGAPFLYLA FT VRRDQMKKSSSVTPCKRRLKRNSNEN" FT misc_feature order(178607..178675,178742..178810,178844..178912, FT 178922..178990,179009..179077,179150..179218, FT 179276..179344,179483..179539) FT /gene="fepD" FT /locus_tag="VSAL_I0139" FT misc_feature 178625..179542 FT /gene="fepD" FT /locus_tag="VSAL_I0139" FT /note="HMMPfam hit to PF01032, FecCD transport family,score FT 1.3e-78" FT /inference="protein motif:HMMPfam:PF01032" FT CDS 179607..180632 FT /transl_table=11 FT /gene="fecD" FT /locus_tag="VSAL_I0140" FT /old_locus_tag="TVS3249" FT /product="iron-siderophore ABC transporter, membrane FT permease component" FT /note="Similar to Vibrio cholerae Cytoplasmic membrane FT permease (viuG); id 34.328%; ungapped id 35.276%; FT E()=5.4e-27; 335 aa overlap" FT /db_xref="GOA:B6EP98" FT /db_xref="InterPro:IPR000522" FT /db_xref="UniProtKB/TrEMBL:B6EP98" FT /protein_id="CAQ77825.1" FT /translation="MKTNLVSTWQLGSIVILAPSKRTLNAVIMAMILITLSLVFSLMLG FT KNGITPDDFITLFKGEASPYQDWLFWQSRLPRVLCAIGAGAALGISGAVFQTLTKNPLG FT SPDIIGINAGASAGAVLWLWFLPNQPIAIGALLGAVSVLTIMLIALGKSWQLSRQLVLL FT GIAINAFAVATVQLILTLVQREQAQQLFGYLSGSLANRNWQDVSVIFMTLIIFVPLLLL FT LARRLSLLTQGYDSAIVLGSRVDTAQWQALLLASGLALGAVLTVGPVAFVALVAPHLAR FT FGHSRLALLRSAIYGSLLLLVSDTITLTLPGLFRMPVGVLTALIGGLYLVGLLSRQVTN FT K" FT misc_feature order(179673..179741,179823..179891,179928..179984, FT 179997..180065,180084..180152,180210..180278, FT 180360..180428,180543..180611) FT /gene="fecD" FT /locus_tag="VSAL_I0140" FT misc_feature 179703..180614 FT /gene="fecD" FT /locus_tag="VSAL_I0140" FT /note="HMMPfam hit to PF01032, FecCD transport family,score FT 2e-58" FT /inference="protein motif:HMMPfam:PF01032" FT CDS 180647..181453 FT /transl_table=11 FT /gene="fepC" FT /locus_tag="VSAL_I0141" FT /old_locus_tag="TVS3248" FT /product="iron-siderophore ABC transporter, ATP-binding FT protein" FT /note="Similar to Vibrio cholerae ATPase (viuC); FT length=279; id 49.802%; ungapped id 50.000%; E()=7.2e-40; FT 253 aa overlap" FT /db_xref="GOA:B6EP99" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:B6EP99" FT /protein_id="CAQ77826.1" FT /translation="MQNNNEITKTLSAHHVSLSYSEGQIINRMQLAIPAKKLTVILGPN FT GCGKSSLLKMLSRIKHPDEGCILLGEENILKMNSKTLARQLALLVQKPELPEGIEVIEL FT VSRGRYPHQKMWQQWSLDDETAVQEALIATGLTELIHRPVASLSGGQQQQVWLAMVLAQ FT KSNILMLDEPTSFLDIRAQLLVMNFCLSLRDQGKTLVMVLHDINQAFRYADNIIMMHKG FT KIVAEGKPEDLANPDIIHTIYGVNTTIITDPESQTPMIIPKKDPSI" FT misc_feature 180752..181312 FT /gene="fepC" FT /locus_tag="VSAL_I0141" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 8.8e-50" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature 180773..180796 FT /gene="fepC" FT /locus_tag="VSAL_I0141" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT repeat_region 181497..183811 FT /note="VSa2" FT repeat_region 181497..181520 FT /note="IR of VSa2" FT CDS 181578..181892 FT /transl_table=11 FT /locus_tag="VSAL_I0142" FT /old_locus_tag="TVS3247" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77827.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 181889..182236 FT /transl_table=11 FT /locus_tag="VSAL_I0143" FT /old_locus_tag="TVSb0153" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77828.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 182308..183795 FT /transl_table=11 FT /locus_tag="VSAL_I0144" FT /old_locus_tag="TVS3244" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EGR2" FT /protein_id="CAQ77829.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 183788..183811 FT /note="IR of VSa2" FT CDS complement(join(183831..184646,184645..185283)) FT /pseudo FT /transl_table=11 FT /gene="gppA" FT /locus_tag="VSAL_I0145" FT /old_locus_tag="TVS3242" FT /product="guanosine-5'-triphosphate,3'-diphosphate FT pyrophosphatase (pseudogene)" FT /EC_number="3.6.1.40" FT /note="Similar to Escherichia coli FT Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase FT GppA UniProt:P25552 (494 aa) fasta scores: FT E()=6.1e-48,51.935% id in 491 aa. CDS contains a frameshift FT after codon 213. The sequence has been checked and is FT believed to be correct" FT /db_xref="PSEUDO:CAQ77830.1" FT /inference="similar to sequence:UniProt:P25552" FT misc_feature complement(order(184410..184645,184646..185217)) FT /gene="gppA" FT /locus_tag="VSAL_I0145" FT /note="HMMPfam hit to PF02541, Ppx/GppA phosphatase family, FT score 1.1e-94" FT /inference="protein motif:HMMPfam:PF02541" FT CDS complement(185316..186620) FT /transl_table=11 FT /gene="rhlB" FT /locus_tag="VSAL_I0146" FT /old_locus_tag="TVS3241" FT /product="ATP-dependent RNA helicase RhlB" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6EPA4" FT /db_xref="InterPro:IPR000629" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014014" FT /db_xref="InterPro:IPR023554" FT /db_xref="UniProtKB/Swiss-Prot:B6EPA4" FT /protein_id="CAQ77831.1" FT /translation="MKKTHITEQKFADLGLEPQVLDGLNAKGFINCTPIQAKALPVLLA FT GQDIAGQAQTGTGKTLAFLAATFNHLLTTPAPEGRKITQPRAIIMAPTRELAIQIYNDA FT ESLIASTGLKAALAYGGERYEKQQKVIEAGVDILIGTTGRIIDFYKQGQIDFKAIQVVV FT LDEADRMFDLGFIKDIRFVFRRMPAPAERLNMLFSATLSYRVQELAFEHMQEPEHVVVE FT PDQKTGHLITEELFYPSNDHKMALLQTLIEEEWPDRAIIFANTKHKCELVWGHLAADKH FT RVGLLTGDVPQKKRERILEEFTKGEVDILVATDVAARGLHIPQVTHVFNFDLPNEAEDY FT VHRIGRTGRAGESGNSISFACEEYAINLPAIEEYIEHSIPQSDYDTSALLEDLPAPIRL FT QRRPPQNRRNGSNNGQRQSGNRKHSRPRPPRSPQA" FT misc_feature complement(185568..185798) FT /gene="rhlB" FT /locus_tag="VSAL_I0146" FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 8.5e-34" FT /inference="protein motif:HMMPfam:PF00271" FT misc_feature complement(185997..186524) FT /gene="rhlB" FT /locus_tag="VSAL_I0146" FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score FT 2.3e-63" FT /inference="protein motif:HMMPfam:PF00270" FT misc_feature complement(186108..186134) FT /gene="rhlB" FT /locus_tag="VSAL_I0146" FT /note="PS00039 DEAD-box subfamily ATP-dependent helicases FT signature." FT /inference="protein motif:ProSite:PS00039" FT misc_feature complement(186441..186464) FT /gene="rhlB" FT /locus_tag="VSAL_I0146" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 186733..187059 FT /transl_table=11 FT /gene="trxA" FT /locus_tag="VSAL_I0147" FT /old_locus_tag="TVS3240" FT /product="thioredoxin 1" FT /db_xref="GOA:B6EPA5" FT /db_xref="InterPro:IPR005746" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR013766" FT /db_xref="InterPro:IPR017937" FT /db_xref="UniProtKB/TrEMBL:B6EPA5" FT /protein_id="CAQ77832.1" FT /translation="MSDKILQLTDDGFEESVINASGPVLVDFWAEWCGPCKMIAPILDE FT IADEYEGKLTIGKLNIDQNAGTPPKFGIRGIPTLLLFKDGGVAATKVGALSKTQLKEFL FT DANL" FT misc_feature 186742..187053 FT /gene="trxA" FT /locus_tag="VSAL_I0147" FT /note="HMMPfam hit to PF00085, Thioredoxin, score 2.2e-49" FT /inference="protein motif:HMMPfam:PF00085" FT misc_feature 186805..186861 FT /gene="trxA" FT /locus_tag="VSAL_I0147" FT /note="PS00194 Thioredoxin family active site." FT /inference="protein motif:ProSite:PS00194" FT CDS 187298..188557 FT /transl_table=11 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /old_locus_tag="TVS3239" FT /product="transcription termination factor rho" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6EPA6" FT /db_xref="InterPro:IPR000194" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004665" FT /db_xref="InterPro:IPR011112" FT /db_xref="InterPro:IPR011113" FT /db_xref="InterPro:IPR011129" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:B6EPA6" FT /protein_id="CAQ77833.1" FT /translation="MNLTELKNRPVSDLVALGESLGLENLARLRKQDIIFSILKQHAKS FT GEDIFGDGVLEILQDGFGFLRSADCSYLAGPDDIYVSPSQIRRFNLRTGDTIGGKIRPP FT KDGERYFALLKVNAVNYDRPDNARNKILFENLTPLHANDRLRMERGNGSTEDITARILD FT LASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAHNYPECELMVLLIDERPEEVTEMQRL FT VKGEVIASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSS FT GKVLTGGIDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGN FT MELHLNRKIAEKRIFPAIDFNRSGTRREELLTKTDELQKMWILRKIVHPMGESDAMEFL FT IDKLSMTKTNNEFFDAMRRQ" FT misc_feature 187310..187438 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="HMMPfam hit to PF07498, Rho termination FT factor,N-terminal domai, score 1.1e-19" FT /inference="protein motif:HMMPfam:PF07498" FT misc_feature 187442..187675 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="HMMPfam hit to PF07497, Rho termination FT factor,RNA-binding doma, score 5.6e-58" FT /inference="protein motif:HMMPfam:PF07497" FT misc_feature 187454..187645 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="HMMPfam hit to PF08206, Ribonuclease B OB FT domain,score 0.002" FT /inference="protein motif:HMMPfam:PF08206" FT misc_feature 187727..187801 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="PS00464 Ribosomal protein L22 signature." FT /inference="protein motif:ProSite:PS00464" FT misc_feature 187766..188392 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="HMMPfam hit to PF00006, ATP synthase alpha/beta FT family, nucleoti, score 6.2e-74" FT /inference="protein motif:HMMPfam:PF00006" FT misc_feature 187829..187852 FT /gene="rho" FT /locus_tag="VSAL_I0148" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 188701..189723 FT /transl_table=11 FT /locus_tag="VSAL_I0149" FT /old_locus_tag="TVS3238" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:B6EPA7" FT /protein_id="CAQ77834.1" FT /translation="MRQGLLASILLSTSLMVGVVSASEIQPTFAKSLLVDAQLKKKVDE FT LHQYLIDGDIITLNFSLNRLSMPQQEAVRFMLLQQIEQQKLILDPKGTIWLRAQLTKHP FT TYMIKEQGDGYVVTKLAFDYSSIASRVLNQMSKDQQVLDFILAAEEHSLVLSEWLVGEP FT HEVRVRQSIVLAELDSLTPEALAYLSGQIDDGPISVWLPTTEIVVRLAPLSQDPAVYKI FT LWKMRTDQHSISELTRLSRLSRLSRLSRLAPDKFATDQLIAATSNPSLKQSAFASLAQL FT HPLPSDVEQFLLAKLSHIQDGGAVALHLANYGHGSWLESLLNSRNKVRKQHVRFALSQR FT " FT sig_peptide 188701..188766 FT /locus_tag="VSAL_I0149" FT CDS 189820..191661 FT /transl_table=11 FT /gene="ubiD" FT /locus_tag="VSAL_I0150" FT /old_locus_tag="TVS3237" FT /product="3-octaprenyl-4-hydroxybenzoate carboxy-lyase" FT /EC_number="4.1.1.-" FT /db_xref="GOA:B6EPA8" FT /db_xref="InterPro:IPR002830" FT /db_xref="InterPro:IPR009002" FT /db_xref="UniProtKB/TrEMBL:B6EPA8" FT /protein_id="CAQ77835.1" FT /translation="MQYKDLRGFLDHLEAIGQLKRISHPIDPHYEMTEISDRTLRAGGP FT ALLFENPIGYDIPVLTNLFGTAERVAIGMGRKDVLELREVGKLLAYLKEPEPPKGFKDA FT MDKLPVFKQVLNMPTKNIRKAACQQIVWKGDDVDLDKIPVMSCWAGDVAPLLTWGLTVT FT RGPHKKRQNLGIYRQQKLSKNKVIMRWLAHRGGALDLRDWMETNPGEPFPVSVAFGADP FT ATILGAVTPVPDTLSEYAFAGLLRGSKTEVTKSISNDLEVPASAEIVLEGYIDPSEFAD FT EGPYGDHTGYYNEIEKHHVFTVTHITMRKDPIYHSTYTGRPPDEPAVLGVALNEVFVPI FT LQKQFPEIIDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVLVCD FT EEVNARDWSEVTAAMSQHMDPFRDSLMIENTPIDSLDFASPVVGLGSKMGLDITKKWDA FT ELALSPNIESSSIESAHIEGNLAELTKAFPEIIDIYLQNDNASMVIVSINKQAAHNGKR FT IMEGVWSQFDENKFVIVCDGDVDVSNWNDIIWAVTTRMDPARDTLFLKNEDSHSKVGLD FT ATNKWEEECLREWGTPIKKDPEIVAKIDAIWGELGIF" FT misc_feature 189847..191121 FT /gene="ubiD" FT /locus_tag="VSAL_I0150" FT /note="HMMPfam hit to FT PF01977,3-octaprenyl-4-hydroxybenzoate carboxy-lyase, score FT 2.7e-200" FT /inference="protein motif:HMMPfam:PF01977" FT CDS 191658..191921 FT /transl_table=11 FT /locus_tag="VSAL_I0151" FT /old_locus_tag="TVS3236" FT /product="putative ferredoxin" FT /note="Similar to Equisetum telmateia (Giant horsetail) FT Ferredoxin-1 UniProt:P00234 (95 aa) fasta scores: FT E()=2.5e-08, 42.857% id in 84 aa" FT /db_xref="GOA:B6EPA9" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR006058" FT /db_xref="InterPro:IPR012675" FT /db_xref="UniProtKB/TrEMBL:B6EPA9" FT /inference="similar to sequence:UniProt:P00234" FT /protein_id="CAQ77836.1" FT /translation="MKKITLLPQKKEFGIEEGQTILDAALEAGINYPNRCQVGACAMCL FT CKKLEGEIEYDLDPLLTDKEQEEGWVFACQATAKSDLVLLLE" FT misc_feature 191667..191897 FT /locus_tag="VSAL_I0151" FT /note="HMMPfam hit to PF00111, 2Fe-2S iron-sulfur cluster FT binding domain, score 8.1e-17" FT /inference="protein motif:HMMPfam:PF00111" FT misc_feature 191763..191789 FT /locus_tag="VSAL_I0151" FT /note="PS00197 2Fe-2S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00197" FT CDS 192020..192730 FT /transl_table=11 FT /gene="fre" FT /locus_tag="VSAL_I0152" FT /old_locus_tag="TVS3235" FT /product="NAD(P)H-flavin reductase" FT /EC_number="1.6.8.-" FT /db_xref="GOA:B6EPB0" FT /db_xref="InterPro:IPR001221" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR008333" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="UniProtKB/TrEMBL:B6EPB0" FT /protein_id="CAQ77837.1" FT /translation="MPINCKVKSIEPLACNTFRILLHPEQPIAFKAGQYLMVVMGEKDK FT RPFSIASSPCRHEGEIELHIGAAEQNAYANEVVQSMKAALENGGDIQIDAPHGEAWIRE FT DNTRSMLLIAGGTGFSYVRSILDHCISQNIEKPIYLYWGGRDERQLYAKAELEAIAAAH FT SHITFVPVIEQGEGWTGKTGNVLEAVKEDFNSLAELDIYIAGRFEMAGAAREQFTTEKQ FT AKKEHLFGDAFAFI" FT misc_feature 192029..192322 FT /gene="fre" FT /locus_tag="VSAL_I0152" FT /note="HMMPfam hit to PF00970, Oxidoreductase FAD-binding FT domain, score 7e-05" FT /inference="protein motif:HMMPfam:PF00970" FT misc_feature 192350..192664 FT /gene="fre" FT /locus_tag="VSAL_I0152" FT /note="HMMPfam hit to PF00175, Oxidoreductase NAD-binding FT domain, score 5.2e-33" FT /inference="protein motif:HMMPfam:PF00175" FT misc_feature 192542..192565 FT /gene="fre" FT /locus_tag="VSAL_I0152" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT repeat_region complement(192815..195130) FT /note="VSa2" FT repeat_region complement(192815..192838) FT /note="IR of VSa2" FT CDS complement(join(192831..194039,194042..194320)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0153" FT /old_locus_tag="TVSa0221" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=1.2e-119, 56.998% id in 493 aa. CDS FT contains a frameshift after codon 93" FT /db_xref="PSEUDO:CAQ77838.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT CDS complement(join(194392..194658,194658..194738)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0154" FT /old_locus_tag="TVSa0220" FT /product="transposase (pseudogene)" FT /note="Similar to Pseudoalteromonas haloplanktis (strain FT TAC 125) putative orphan protein putative transposase (is66 FT family element,orf2-like). UniProt:Q3IIG1 (EMBL:CR954246) FT (115 aa) fasta scores: E()=3.3e-31,57.391% id in 115 aa. FT CDS contains a frameshift after codon 27" FT /db_xref="PSEUDO:CAQ77839.1" FT /inference="similar to sequence:UniProt:Q3IIG1" FT CDS complement(194735..195049) FT /transl_table=11 FT /locus_tag="VSAL_I0155" FT /old_locus_tag="TVS3231" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77840.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT repeat_region complement(195107..195130) FT /note="IR of VSa2" FT CDS 195131..195317 FT /pseudo FT /transl_table=11 FT /gene="coaD" FT /locus_tag="VSAL_I0156" FT /old_locus_tag="TVS3230" FT /product="phosphopantetheine adenylyltransferase FT (fragment)" FT /EC_number="2.7.7.3" FT /note="Similar to C-terminal part of Serratia marcescens FT Phosphopantetheine adenylyltransferase CoaD UniProt:Q9X980 FT (161 aa) fasta scores: E()=7.7e-10, 61.111% id in 54 aa. FT CDS is truncated by the insertion of the upstream IS FT element and subsequent recombination events" FT /inference="similar to sequence:UniProt:Q9X980" FT CDS complement(195363..197342) FT /transl_table=11 FT /locus_tag="VSAL_I0157" FT /old_locus_tag="TVSa0219" FT /product="membrane associated sulfatase" FT /db_xref="GOA:B6EPB4" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:B6EPB4" FT /protein_id="CAQ77842.1" FT /translation="MSFQQNFKQLSRTIWLSVFIATAIMSVGRLVFLANIGDMAELTHR FT GGDLWRALFTGLRFDLKIVVIGFVPLLLIGLVLAIFPKAYRFFVRIIPWYAGLIFFIVT FT GFSIGNYYYYLTYGNYIDVFIFGLADDDTKAVLANAWADYPIFLSFISSVIVAFFSAII FT VRSAVNKMQQWEWKLQHKGIISVSVFVMILTIFFFARGTLGSHPLKRYHAQISDYKVLN FT SITPNGLIALEWAKSDYKKQNKFHSVNKVDLEAQFTKVVGNSTGQFTTPYNAYLAENKP FT HVVMALMEGMGTNVLVEDNYPENDLLGALRPTFESGFVFKRFLAETPATINTLVNMLGQ FT SNVPTISHSSAQKVEVAAAAARPYKAAGYKTIFITATNGMWRNVANYLPSQGFDEILDE FT NAILKAFPEAEAFRGEWGLSDEYAFKLAEKELKEATQPLMIYILTITNHTPYEVPENYD FT VKPLKVSERLLERMGSGEEEATRLLETYQYANNALGEFIMDIKQSPLGESTLIAATGDH FT KLRGFTMQYPDDLAIINAVPFYLYVPEKIQHQVPYIYNEKVVGSHKDIFPTLYAFSLSE FT ATYYSLGGENMLSTTDTNRFGYNPEMTLIEQGIYMNKQPDRLYPWVSEVAITPESISNN FT GKLLDKDYHTLQTLYINSQVKGVH" FT CDS complement(197379..198197) FT /transl_table=11 FT /gene="mutM" FT /locus_tag="VSAL_I0158" FT /old_locus_tag="TVSa0218" FT /product="formamidopyrimidine-DNA glycosylase" FT /EC_number="4.2.99.18" FT /db_xref="GOA:B6EPB5" FT /db_xref="InterPro:IPR000191" FT /db_xref="InterPro:IPR000214" FT /db_xref="InterPro:IPR010663" FT /db_xref="InterPro:IPR010979" FT /db_xref="InterPro:IPR012319" FT /db_xref="InterPro:IPR015886" FT /db_xref="InterPro:IPR020629" FT /db_xref="UniProtKB/TrEMBL:B6EPB5" FT /protein_id="CAQ77843.1" FT /translation="MPELPEVETSRLGITPHLQGQTIKAITVRTEKLRWPIPQELQKLV FT GQRIQSIRRRAKYLMIDTPEGTAIIHLGMSGSLRILDEAIPTAKHDHVDLVLDSGKLLR FT YNDPRKFGAWLYSEVGVSHDVLAKLGPEPLTDVFNVEYLAEKAKNKKIVVKQFIMNNTI FT VVGVGNIYASESLFMAKINPKAPVGTLTLAQIERLVSDIKKVLETAIKQGGTTLKDFNQ FT VDGKPGYFAQELQVYGRAGEACLICQSLIQEQKIGQRNTFWCEKCQPINQ" FT misc_feature complement(197856..198194) FT /gene="mutM" FT /locus_tag="VSAL_I0158" FT /note="HMMPfam hit to PF01149, Formamidopyrimidine-DNA FT glycosylase N-, score 7.9e-47" FT /inference="protein motif:HMMPfam:PF01149" FT CDS 198490..199431 FT /transl_table=11 FT /gene="hldD" FT /locus_tag="VSAL_I0159" FT /old_locus_tag="TVSa0217" FT /product="ADP-L-glycero-D-manno-heptose-6-epimerase" FT /EC_number="5.1.3.20" FT /db_xref="GOA:B6EPB6" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR011912" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPB6" FT /protein_id="CAQ77844.1" FT /translation="MIIVTGGAGMIGSNIIKSLNDNGFNDILVVDNLKDGKKFKNLVDL FT DITDYMDKEDFITQIMAGDDFGTIDAIFHEGACSATTEWDGKYMMMNNYEYSKEVLHFC FT IEREIPFLYASSAATYGDTDTFIEEREYEGALNVYGYSKQQFDNYVRRLWADAEAHGET FT VSQITGFRYFNVYGPREQHKGSMASVAFHLNNQMNASEDPKLFERSDEFKRDFVYVGDV FT AAVNLWFLENGVSGIFNCGTGRAEPFRAVADAVIKHHGKGEVQSIPFPEHLKGAYQEFT FT QADLTKLRAAGCDVEFKSVADGVAEYMAIVNK" FT misc_feature 198493..199212 FT /gene="hldD" FT /locus_tag="VSAL_I0159" FT /note="HMMPfam hit to PF01370, NAD dependent FT epimerase/dehydratase family, score 9.3e-45" FT /inference="protein motif:HMMPfam:PF01370" FT misc_feature 198496..199302 FT /gene="hldD" FT /locus_tag="VSAL_I0159" FT /note="HMMPfam hit to PF01073, 3-beta hydroxysteroid FT dehydrogenase/isomera, score 3.9e-06" FT /inference="protein motif:HMMPfam:PF01073" FT CDS 199602..200828 FT /transl_table=11 FT /gene="waaL" FT /locus_tag="VSAL_I0160" FT /old_locus_tag="TVSa0216" FT /product="O-antigen ligase WaaL" FT /db_xref="GOA:B6EPB7" FT /db_xref="InterPro:IPR007016" FT /db_xref="UniProtKB/TrEMBL:B6EPB7" FT /protein_id="CAQ77845.1" FT /translation="MKKISLPLIATILCFLFFSTPIIYPDSYVVAPLLLALFGLFLLPK FT TYHAFKNRDVKYISLSMVGYFILTIISFLYSGGETSQLDMPSRTVLASFILCFLVTYKP FT NPAPLFLAAPIGAAIAGFISFYHSFYIGGCAFVGTFGYMPIQIGGIIASLATFSVISFF FT YYRKTEQKNFAVFSFVAANLGYIATLLSGARGAWLLTPFVLLIVLYLNKELINKKIVGY FT ALLAAIIDLSIASAQITSRLDAIQSDLTQYSAEQSASSSGARLEMWKSALYSAQESPLF FT GQGFSGIEAAKQRQLDAGLIDPIALKYSRAHNQYLEDLQTKGIFGLSVLLIMFAVPFAF FT FKRNLKQYINDSDKDTHYFLALMGASHVALVAGYALTQHYLSHHSGILFFAVGIAILSA FT LVINQRKPS" FT CDS 200825..201895 FT /transl_table=11 FT /gene="rfaF" FT /locus_tag="VSAL_I0161" FT /old_locus_tag="TVSa0215" FT /product="ADP-heptose-LPS heptosyltransferase II" FT /EC_number="2.-.-.-" FT /db_xref="GOA:B6EPB8" FT /db_xref="InterPro:IPR002201" FT /db_xref="InterPro:IPR011910" FT /db_xref="UniProtKB/TrEMBL:B6EPB8" FT /protein_id="CAQ77846.1" FT /translation="MKILIIGPSWVGDMVMSQSLYITLKQQNPDAVIDVMAPAWCKPIL FT ERMPEVNQAIEMPLGHGAFDLFGRRRLSKQLSANNYTHAYICPNSAKSALIPWFAGIPI FT RTGWKGEMRYGLLNDLRSNKKSFQYMVERYVALAHPKSEMINSSSLGGLDTLPRPKLAI FT DADTQQAMLTKFSLSADKPVLGLCPGAEFGPAKQWPVEHYAAVANEMINQGYQVWLFGS FT AKDKETTEAIKSLVHSDNQASVFNLAGDTSLIEAVDLLAACKTVVSNDSGLMHVAAAVG FT CHVVGVYGSTSPKYTPPLAEKVDIVSTDIECRPCFKRECEFKHLKCLTDLDPQLVLDKI FT SPKSHSNESVIQVTSC" FT CDS 201889..203151 FT /transl_table=11 FT /gene="kdtA" FT /locus_tag="VSAL_I0162" FT /old_locus_tag="TVSa0214" FT /product="3-deoxy-D-manno-octulosonic-acid transferase" FT /EC_number="2.-.-.-" FT /db_xref="GOA:B6EPB9" FT /db_xref="InterPro:IPR001296" FT /db_xref="InterPro:IPR007507" FT /db_xref="UniProtKB/TrEMBL:B6EPB9" FT /protein_id="CAQ77847.1" FT /translation="MLIRLVYTLLLTLLSPVLLFGLYKKKPNKPQFGDRWKEHFGFTPT FT LKKSEQPLWIHAVSVGEAIAATPLIKALKQQSPEQPILVTTTTSTGAEQIAKLGDLVEH FT RYMPIDFPFAVNGFLKTVNPSKLLIIETELWPNTLHSVGKSNIPIYVVNARLSEKSCQG FT YTKIQPVFTELSKHLTKVLCQTQADADRFARLGINKERLCATGSIKFDIQISDEIKQQG FT QELRQLLDNDRPIWIAASTHKGEDEQVLDAHKEVLKEHPNALLILVPRHPERFDTVFEL FT SKNSGFSSIRRTSNKTVTAETQVYLGDTMGEMLVLIGAADVCFMGGSLLGDKVGGHNVL FT EPAALGVPVIIGPSYYNFKEIVDTLRGEQGIVICEPTQLSNHIVKLIDDSTEYQLLQNS FT ASNVVQSNQGALNRTIAISNI" FT CDS 203198..204199 FT /transl_table=11 FT /locus_tag="VSAL_I0163" FT /old_locus_tag="TVSa0213" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR012477" FT /db_xref="UniProtKB/TrEMBL:B6EPC0" FT /protein_id="CAQ77848.1" FT /translation="MNVFLVTSPFQYICANEARCHYATNDNILLLVKQDMEPAISQMTK FT IVNENDWTHVINIERSQRTFSMPKAIKAVNKIRTNSSIKHFFHGEYNGWRTKFLLRNLK FT PDTEIYFDDGSLTLGEYERFIKTEHTFYRPRFVNDLIIKMQGLKPIGRLPISKKLEIFT FT IFDIKDPTVPVVKNDFSNMRETYNLNDDHQREHSNEYALFLGQGSIDCHGTIKSFYLDA FT IKRFAKTTGKKILYAPHRTETSDIRKEILKIENLTYHDSTLPIELEIAEKQLNINNIGG FT IASTALYTLKIIYPHIKIYSAKQSKEEYHTQVTYTDNELMLELLKSIGIELF" FT repeat_region complement(204351..205404) FT /note="VSa7" FT repeat_region complement(204351..204380) FT /note="IR of VSa7" FT CDS complement(204352..205308) FT /transl_table=11 FT /locus_tag="VSAL_I0164" FT /old_locus_tag="TVSa0212" FT /product="transposase" FT /db_xref="GOA:B6EKX7" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:B6EKX7" FT /protein_id="CAQ77849.1" FT /translation="MGYQYKQLTLGERYQIEAWNTHSISAREIGQKLKRSNGSISKELR FT RCPAGSYSAEQAHKHAFQKRTLSIKHTKCSQKNKKIIHLYLQLGWSPEQISGRMRREKI FT ENTICCSTIYNAIKREQWQRMLARKGKKYKQRKGVEAGARLIPNRIDISQRPAIVDDKS FT EVGHWEGDTVYGQDGYLVTMVERVSKLLVTCKVRNKSKKAVTRGINRMMKPFKELCKTI FT TFDNGGEFAGHAKIAKHLNCDIYFAKPYHSWQRGLNENTNGLLRRFFPKGMAIGELTAK FT EIKQAEFLINSRPRKTLNFLSPSEFLNGKSVSVIVTI" FT repeat_region complement(205375..205404) FT /note="IR of VSa7" FT CDS complement(205561..206664) FT /transl_table=11 FT /locus_tag="VSAL_I0165" FT /old_locus_tag="TVSa0211" FT /product="hypothetical protein, putative pseudaminic acid FT biosynthesis protein" FT /note="Similar to Campylobacter jejuni PseA UniProt:Q939J7 FT (378 aa) fasta scores: E()=6.6e-39, 36.216% id in 370 aa" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR020022" FT /db_xref="UniProtKB/TrEMBL:B6EPC2" FT /inference="similar to sequence:UniProt:Q939J7" FT /protein_id="CAQ77850.1" FT /translation="MKYCSKCVMPDTRPGIAFDENGICTPCLNHEKKKNIDWDSRYKEL FT EKLCEKYRGINGEGQYDCMIAVSGGKDSHYQVYFMKEVMKMNPLLVSVEDNFPMTDAGK FT HNIRNISEEFGCDIISLKPNIKVQKHLMRKTFERYGKPTWFIDRLIYTYPLMMAEKFNT FT ALLVYGENVSFEYGGADAVETYSARNIIDNGVASDIPFEDLIDDNIQDNDLVLCHAPTK FT SQLDRIDPMYLGYFIPWDSFTNYNFATKRGFKDLTHEWDRTHHVENFDQVDSRAYLVHP FT WLKYPKFGHASATDYAARMVRYGMLTRKEAVELVKAKDAKLDPKCIEDFCNFLGYSNRQ FT FWDVVDGLYNTELFNKDNNGEWVLKSI" FT CDS complement(join(206661..207218,207222..207356)) FT /pseudo FT /transl_table=11 FT /gene="nnaC" FT /locus_tag="VSAL_I0166" FT /old_locus_tag="TVSa0210" FT /product="putative acylneuraminate cytidylyltransferase FT (pseudogene)" FT /note="Similar to Escherichia coli NnaC UniProt:Q93NQ1 (421 FT aa) fasta scores: E()=3.8e-21, 42.130% id in 216 aa. CDS FT contains a nonsense mutation (TAG) after codon 45. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ77851.1" FT /inference="similar to sequence:UniProt:Q93NQ1" FT CDS complement(207356..208414) FT /transl_table=11 FT /locus_tag="VSAL_I0167" FT /old_locus_tag="TVSa0208" FT /product="nucleotidyl transferase" FT /note="Similar to Campylobacter coli PtmE UniProt:Q7X521 FT (220 aa) fasta scores: E()=5.9e-31, 43.439% id in 221 aa" FT /db_xref="GOA:B6EPC4" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:B6EPC4" FT /inference="similar to sequence:UniProt:Q7X521" FT /protein_id="CAQ77852.1" FT /translation="MSYSWKKVLIKPESTIVDALRVIDNESLRIALVVNDEQQLLGVVT FT DGDIRRSILNNLPLDTLVVDIMSCSPITASVNTAKEQLVKLMESEGILAIPLMEENKVV FT GLETLHHLFEEKTYHNPVFIMAGGFGTRLRPLTDSCPKPMLKIGNKPILETVIRSFIKA FT GFVNFYISTHYMPEQIQQHFGDGSDLGVKISYVHEDFPLGTGGALGLLPDDLPKDLPLI FT MMNGDVLTKVDFERLLDFHTENEADATMCVREYDYQIPYGVINGEGNKITSMVEKPIQR FT FFVNAGIYVVSPRVIQSVPENHHIDMPTLLEQHMNERDNILMFPIHEYWLDIGRMDDFN FT RAQADIHTLGVL" FT CDS complement(208430..209074) FT /transl_table=11 FT /locus_tag="VSAL_I0168" FT /old_locus_tag="TVSa0207" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6EPC5" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR018357" FT /db_xref="InterPro:IPR020019" FT /db_xref="UniProtKB/TrEMBL:B6EPC5" FT /protein_id="CAQ77853.1" FT /translation="MSKTELKPLVVIGGGGHASVLVDILRSQQREILAIVSPEDISQRR FT VFSGLTHLKNDDDVLGFSPDSVYLVNGVGMLPKSGLKRKLNEYFISLGYSFETVISDSA FT QVSSFAEIEQGAQIFSGAIIQAGVVIGAHSIINSGVIIEHDCMIGQYNHIAPKAILCGQ FT VTTHQYVYIGANATVIQNITLEQSSIVGAGAIVTKNISSEQICYPSRSVLK" FT CDS complement(209067..210140) FT /transl_table=11 FT /locus_tag="VSAL_I0169" FT /old_locus_tag="TVSa0206" FT /product="N-acetylneuraminic acid synthase" FT /note="Similar to Campylobacter coli PtmC UniProt:Q7X523 FT (334 aa) fasta scores: E()=4.5e-31, 52.113% id in 355 aa" FT /db_xref="GOA:B6EPC6" FT /db_xref="InterPro:IPR006190" FT /db_xref="InterPro:IPR013132" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR013974" FT /db_xref="InterPro:IPR020007" FT /db_xref="UniProtKB/TrEMBL:B6EPC6" FT /inference="similar to sequence:UniProt:Q7X523" FT /protein_id="CAQ77854.1" FT /translation="MTLIIAEAGVNHNGDENLAFQLVDAAYHAGADIVKFQTFKAKNLV FT TEDAVQAEYQVTNTQKQESQLAMLSRLELSYDIHHQLVKHCESLGIEFLSTAFDSESLD FT FLVNDLGLTRLKIPSGEITNAPLVLEHARTGCDLIVSTGMATLSEIEAVLGVIAFGYVA FT DKTEEPSELAFQQAYASEQGQKALKKKVTILHCTTEYPAPMVEINLKAMDTLGRAFELP FT AGYSDHSAGITIPIAAVARGAVLIEKHFTLDQNMEGPDHKASLEPQELTAMVSAIRQVE FT VALGVGVKSPTVSEVKNKAVARKSLVAAKAIQQGDLITEDNLTIKRPGSGMSPYHYWAL FT LNQPASQDYKAGDLIVE" FT CDS complement(210148..211332) FT /transl_table=11 FT /locus_tag="VSAL_I0170" FT /old_locus_tag="TVSa0204" FT /product="UDP-N-acetylglucosamine 2-epimerase" FT /EC_number="5.1.3.-" FT /note="Similar to Campylobacter coli PtmD UniProt:Q7X522 FT (391 aa) fasta scores: E()=1.7e-50, 42.010% id in 388 aa" FT /db_xref="GOA:B6EPC7" FT /db_xref="InterPro:IPR003331" FT /db_xref="InterPro:IPR020004" FT /db_xref="UniProtKB/TrEMBL:B6EPC7" FT /inference="similar to sequence:UniProt:Q7X522" FT /protein_id="CAQ77855.1" FT /translation="MSQLFMNKKVAVFTGTRAEYGLLFWLLKDIQNDPELQLQLLVSGM FT HLSPEFGETYKQIETDGFVIDEKIEILLSSDSAVGTAKSMGLGVLGFADSLSRLQPDVL FT VILGDRFEALAAAQTAMIMRIPIVHLHGGEITEGAYDDAIRHAITKLSYLHGTSTEDYR FT QRVIQLGEDPSRVQNVGAIGLDHLKRATFMTVAELSESLDFTLDKPFFLVTYHPVTLGN FT EAPEESFQALLNALDEYPDHQVILTYPNADDGGRRIIPILEEYARSNPTRVLAIPSLGQ FT VRYLSSVMHATAVIGNSSSGIIEVPAFDVPTVNIGSRQKGRLAAKSVLNVEPNQQSISD FT AIQVAIDRTYKLADEKIHNPYGQGDTSGKVIEMIKSLQFTPSKAFYDITINDVE" FT CDS complement(211370..212515) FT /transl_table=11 FT /locus_tag="VSAL_I0171" FT /old_locus_tag="TVSa0203" FT /product="DegT/DnrJ/EryC1/StrS aminotransferase" FT /db_xref="GOA:B6EPC8" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EPC8" FT /protein_id="CAQ77856.1" FT /translation="MNKTPLVEFVRDIYQTNDFIPLHAPTFDGNEQKYVLETIQSTFVS FT SVGKFVDEFEQKIESYTGTAKAVATVNGTAALHAALYMAGVQHGDFVITQALTFVATCN FT ALHHMGAEPIFVDVSPVSLGLCPKAMDEYLTQHAQVTETGCIHSQTKRPIRAVVPMHTF FT GHPVELDELIAVCHKWNITLVEDAAESLGSFYKGKHTGTLGDFGAVSFNGNKIITTGGG FT GMVLCKTAELGARTKHVTTTAKVPHPYEFYHDEAGFNYRMPNLNAALGCAQMEVLEPYL FT AQKRVLANRYQDFFAESDFQFVSEPEYAQSNYWLNAVICPSVDARNDILKQTNESGVMT FT RPIWQLMHRLPMFKEAPRGDLTQSEYIEAHLINLPSTPVAL" FT CDS complement(212539..213729) FT /transl_table=11 FT /locus_tag="VSAL_I0172" FT /old_locus_tag="TVSa0202" FT /product="polysaccharide biosynthesis protein" FT /db_xref="GOA:B6EPC9" FT /db_xref="InterPro:IPR003869" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPC9" FT /protein_id="CAQ77857.1" FT /translation="MNPILSLIGRTDALFTQDIASHEAELSRIVSQSRFLVLGGAGSIG FT QAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFI FT KADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTD FT KAANPVNMMGASKRIMEMFLMRKSEKMAISTARFANVAFSDGSLLHGFNQRIQKNQPIV FT APNDIKRYFVTPQESGELCLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQIGYE FT PHLCDSEDEARELAKTLPAQGKWPCLFTSSDTTGEKDFEEFFTDKETLDMARFDNLGII FT KNDPLYQQELLALFEQKIGQMKSDRQWTKEEIVQLFFTMIPDFGHKETGKYLDSKM" FT CDS complement(213847..214968) FT /transl_table=11 FT /locus_tag="VSAL_I0173" FT /old_locus_tag="TVSa0200" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPD0" FT /protein_id="CAQ77858.1" FT /translation="MIDIKDKHVFFIADNDRFFYLYADALIHRAKISPESLVVIVFPML FT GHMDNLNKIEQVTYAQINPEVIASALDAKTITFMSLHKGNSSYVKQVLELNESIVDKVH FT IFLADDEVDRWGRVFKKHDNIVEDNKALIGRDDIWVLGKINKFIAHKKTFEQKLVTLLK FT RETIEFIDAGVIFDTLPTLESECLRQAYIKNKIVADSEKKILIGTKQKSFDLRTIISII FT KECTAVLGDEYKFLILWHKKQRKERMFLDLHLIYLRHIKRKTVDVSYVTALNPLGYTAL FT VMSCSHIILQGRGGASTARQFIKWAGGIVCIQEDTANNFGFRDALGLDILSFESSKELA FT SKIKEEKISLQLNAERTQDEEKRSIQELFRLYN" FT CDS complement(214965..216107) FT /transl_table=11 FT /gene="rffA" FT /locus_tag="VSAL_I0174" FT /old_locus_tag="TVSa0199" FT /product="lipopolysaccharide biosynthesis protein RffA" FT /db_xref="GOA:B6EPD1" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR012749" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EPD1" FT /protein_id="CAQ77859.1" FT /translation="MIPFNKPPVTDNEISYIDQAIKSGCLAGDGHFSKKCETWFENATG FT AQKTLLTPSCTHALEMAALLIDIQPGDEVIMPSYTFVSTANAFVLRGAKIIFVDVHPET FT MNINENLIEAAITKKTKAIVPVHYAGVACEMDLIMSLAHKYSLFVIEDAAQGVMSTYKG FT KALGSIGHLGAFSFHETKNYTSGGEGGLLLINDSRFIKRAEILREKGTNRSQFFRGMVD FT KYSWVDVGSSFLPSEIQSAYLWAQLGSADKINKKRLSDWLFYFNKLLPFQHEGLIDLPH FT IPEEVKHNAHMFYIKVENLEVRTQVLNKLKDRGILAVFHYIPLHSSIAGLQFGRFHAED FT KYTTEESERLLRLPMFYNLLESERELVCNELIKILKEIQS" FT CDS join(216190..216645,216649..216903) FT /pseudo FT /transl_table=11 FT /gene="wavS" FT /locus_tag="VSAL_I0175" FT /old_locus_tag="TVSa0198" FT /product="lipopolysaccharide biosynthesis protein WavS FT (pseudogene)" FT /note="Similar to Vibrio cholerae WavS UniProt:Q8RTH0 (222 FT aa) fasta scores: E()=3.6e-13, 39.161% id in 143 aa. CDS FT contains a nonsense mutation (TAA) after codon 152. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ77860.1" FT /inference="similar to sequence:UniProt:Q8RTH0" FT CDS complement(216890..217729) FT /transl_table=11 FT /gene="wavT" FT /locus_tag="VSAL_I0176" FT /old_locus_tag="TVSa0197" FT /product="putative glycosyl transferase" FT /db_xref="GOA:B6EPD3" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:B6EPD3" FT /protein_id="CAQ77861.1" FT /translation="MLKPKASLIIAFYNNTVCLELIFKALSTQTESNFEVIIADDGSKQ FT EAIDFINTRKESLPFTVKHVWHEDKGFRKNRILNHAVLKSSSDYLIIIDGDCIPEKHFI FT EDHFNNAEKGRSLSGRRVELPELYTQRVMNSVSPGAFFSENKLEILIRYMLSNGDKQTK FT GRHIEKGLRFAKLWQQSLFKGKKAKAILGCNFSLFKEDLLKINGFDMRYEAPAVGEDSD FT VDYRLNLVGVTNKSLNGLAVQIHLYHPWLDRVSGNWDILRDTMKHERYWADSGINDC" FT CDS complement(217730..218287) FT /transl_table=11 FT /gene="rmlC" FT /locus_tag="VSAL_I0177" FT /old_locus_tag="TVSa0196" FT /product="dTDP-4-dehydrorhamnose 3,5-epimerase" FT /db_xref="GOA:B6EPD4" FT /db_xref="InterPro:IPR000888" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:B6EPD4" FT /protein_id="CAQ77862.1" FT /translation="MNVIDTNIPDVKIFEPTVFGDERGFFMETWSQKKFEELVTGKPTQ FT FVQDNHSKSKKGILRGLHYQTENTQGKLVRVVSGEVFDVVVDIRENSPTFGQWVGTYLS FT AENKHQLWVPEGFAHGFYVTSEDAEFVYKCTDYYNPKSEISIAWDDKAIGIEWPITTPP FT QLSEKDKNAMILSQVTPIKQED" FT CDS complement(join(218298..218987,218997..219197)) FT /pseudo FT /transl_table=11 FT /gene="rmlD" FT /locus_tag="VSAL_I0178" FT /old_locus_tag="TVSa0195" FT /product="dTDP-4-dehydrorhamnose reductase (pseudogene)" FT /note="Similar to Vibrio cholerae FT DTDP-6-deoxy-L-mannose-dehydrogenase rmlD UniProt:Q842N3 FT (291 aa) fasta scores: E()=2.3e-59, 58.108% id in 296 aa. FT CDS contains two nonsense mutations (TAA) and (TAA) after FT codon 67. The sequence has been checked and is believed to FT be correct" FT /db_xref="PSEUDO:CAQ77863.1" FT /inference="similar to sequence:UniProt:Q842N3" FT CDS complement(219197..220081) FT /transl_table=11 FT /gene="rmlA" FT /locus_tag="VSAL_I0179" FT /old_locus_tag="TVSa0194" FT /product="glucose-1-phosphate thymidylyltransferase RmlA" FT /EC_number="2.7.7.24" FT /db_xref="GOA:B6EPD6" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR005907" FT /db_xref="UniProtKB/TrEMBL:B6EPD6" FT /protein_id="CAQ77864.1" FT /translation="MKGIVLAGGSGTRLYPLTRGVSKQLLPIYDKPMVFYPISTLMLAG FT IKDILIITTPEDNAGFKRLLGDGSDFGINLEYAIQPSPDGLAQAFIIGEEFIGDDPVCL FT VLGDNIFYGQSFSKTLKNAASRDLGATVFGYQVKDPERFGVVEFDEKMKAISIEEKPLK FT PKSNYAVTGLYFYDNRVVEMAKQVKPSHRGELEITTLNEMYLNDGSLNVELLARGFAWL FT DTGTHESLHEASSFVQTIEHIQGLKVACLEEISWRNGWLSDEQILDLATPMMKNEYGQY FT LTRLINDNKQKEL" FT CDS complement(220081..221172) FT /transl_table=11 FT /gene="rmlB" FT /locus_tag="VSAL_I0180" FT /old_locus_tag="TVSa0193" FT /product="dTDP-D-glucose-4,6-dehydratase" FT /db_xref="GOA:B6EPD7" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR005888" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPD7" FT /protein_id="CAQ77865.1" FT /translation="MNILVTGGAGFIGSAVIRHIISNTSNSVINVDSLTYAGNLESLSQ FT VEASDRYSFEHVDICNRTELDRIFSEYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGT FT YTLLEATRAYWNLLADDKKQAFRFHHISTDEVYGDLEGTDDLFTETTPYEPSSPYSASK FT ASSDHLVRAWQRTYGLPTVITNCSNNYGPYHFPEKLIPLMILNALEGKYLPVYGNGMQI FT RDWLFVEDHARALYKVVTEGEIGETYNIGGHNEKANIEVVKTICSLLEELVPNKPEGVA FT QYLDLITYVTDRPGHDVRYAIDASKIEHELGWKPEESFESGIRKTVQWYLDNKQWWSRV FT LDGSYAGERLGVSSEQVVHKEIR" FT CDS complement(221194..223047) FT /transl_table=11 FT /locus_tag="VSAL_I0181" FT /old_locus_tag="TVSa0193a" FT /product="membrane associated sulfatase" FT /db_xref="GOA:B6EPD8" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR012159" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR024588" FT /db_xref="UniProtKB/TrEMBL:B6EPD8" FT /protein_id="CAQ77866.1" FT /translation="MILNTLTFKQKLHSHGWFILINSLIAMAIATRYFAFLPEIPTDIL FT GFSFITSGTFSQMVLLVGLIGLVALPALAIRPAKIRNGLQALIASICIATLFIDILVFA FT QYRFHINAVVLELVLSGQVVSFPLITWVTVIGGVIALVVGQYLLISWLEKPAAITQHKL FT GRKFALITFFALLATHGIHIWAAANAYQPVTTVKRYLPAFYPATSTSMMKKYGWVNEEA FT IAQQKAMKLNRKSDLNYPLAPLQKEAVEKPINIMILTVDSWRADTFNAENTPNMWEYAQ FT SGVIFNNHIATGNATRTGIFGLFYGIPGTYWHGFLANQKTPALIDRLQELNYDMGIFTA FT AQLEKPEFNQTVFKNIPNLRIKSEGGSPSELDKDLTKDWLEWYSKRDTSKPAFSFLFYD FT APHGYDFPKDYAHRYEPMLDEINYLELSNDSDPTPFFNRYKTSVHFVDSVAKQVLDKLK FT ETGDLENTLVIITGDHGQEMNDNRMNFWGHNSNFTDAQVKVPFAIFGPKINGKALDWTA FT DDLTSHQDVVPTLMKNYLGVTNNIKDYSVGEDLLGKHVDRNWIMTSNYSGYAIIDKESI FT LEVGATGQYQLLDKTNRPMKDAELNYQHLQEALEQISRFSK" FT CDS complement(223080..223784) FT /transl_table=11 FT /gene="wavC" FT /locus_tag="VSAL_I0182" FT /old_locus_tag="TVSa0192" FT /product="lipopolysaccharide core oligosaccharide FT biosynthesis protein WavC" FT /db_xref="GOA:B6EPD9" FT /db_xref="InterPro:IPR010440" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR022826" FT /db_xref="UniProtKB/TrEMBL:B6EPD9" FT /protein_id="CAQ77867.1" FT /translation="MQKIQTTKQTIWYDDSILSDSPEQCCDPDYWQQQDKVIGSAQGRG FT TTWFVALDTMDAALRHYRRGGLFGKLIKDHYIFTGWEKTRSYQEFQLLNILIEAGVNVP FT KPIAARSIKRTFCYQADLLSEKIPHARDLVAILQEESLSKEIYQKIGAEIGKMHTAQVN FT HTDLNIHNILIDDKENVWIIDFDKCYQQEGSDWKESNLSRLNRSFHKEVNKRQIKWSED FT EWQHLFSGYNTI" FT CDS 224160..225230 FT /transl_table=11 FT /locus_tag="VSAL_I0183" FT /old_locus_tag="TVSa0191" FT /product="glycosyl transferase" FT /db_xref="GOA:B6EPN4" FT /db_xref="InterPro:IPR002201" FT /db_xref="UniProtKB/TrEMBL:B6EPN4" FT /protein_id="CAQ77868.1" FT /translation="MALFTSAPNSLCILRLSAIGDVCHAVAAVQAIQKEWPTTKITWIV FT GKIEAQLIHDLPGITVIPFDKKLGLKGMKAIWSQLNNQRFDALIHMQLALRASVLTIGI FT KAKYKVGFNRKRAKEGQWLFTNRKIEDTASAHVLDSFYSFIEYLGVPKSEPTWNIPLSD FT DDFSFVNSHIPAEKPYVVISPAASKDERNWLTERYAQLSDWLTTQGYQVVLCGSPSDRE FT KQLGDSIESLANSPLINLIGKTSLKQLTAVLKKATVVIAPDSGPAHIATTQATPVIGLY FT GHSNPKRTGPYNSLSYVVSVYEQHVTQQQNKPVNELKWSTRVKGEHIMQDITLDMVARS FT FQQLEIILNSTEEGKK" FT CDS 225230..226012 FT /transl_table=11 FT /gene="waaE" FT /locus_tag="VSAL_I0184" FT /old_locus_tag="TVS0057a" FT /product="glycosyl transferase" FT /db_xref="GOA:B6EPF5" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:B6EPF5" FT /protein_id="CAQ77869.1" FT /translation="MTTSSPTLAVALIVKNEAKHLKACLDTVADWVDEIVIMDSGSTDS FT TETIAREFTDKFIVNKEWPGFGKQRQLAQQHVTSDYVLWLDADERVTPELKTEILAAVK FT ANKTKTAYKINRSSSAFGKFIKHSGWSPDWVVRLYKTDETQYSDSLVHESVVIPNHIQV FT NALTGRLLHFTYDALQQYNAKNVMYIKSWVDQREGKKKGSLSGAFLHGFFCFIRMYILK FT RGFLDGRHGLLLATLSASVTFNRYADLWLRDYNKANKE" FT CDS 226012..227043 FT /transl_table=11 FT /locus_tag="VSAL_I0185" FT /old_locus_tag="TVS0057" FT /product="glycosyl tranferase" FT /EC_number="2.-.-.-" FT /note="Similar to Rhizobium meliloti lipopolysaccharide FT core biosynthesis glycosyl transferase LpsD UniProt:Q9R9N0 FT (343 aa) fasta scores: E()=1e-10, 25.852% id in 352 aa" FT /db_xref="GOA:B6EPF4" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:B6EPF4" FT /inference="similar to sequence:UniProt:Q9R9N0" FT /protein_id="CAQ77870.1" FT /translation="MMKIYHVNLARGFSGGEQQTLALIQQHLKEKQNIAVIALTNSPFY FT NAISDLGCEVITVRHYLLGHTISLPKDAVLHVHEGHAIYWAALQHKVSQTPYIITRRLD FT NPIKKKWLTTFAYSNAAAIVGISTCVSEVVRQRLPQQHIMTIPDSPVTYPINHSEVANI FT RERFKDKFLVIQAGNMIPHKGFDVTVNAAMLLKDPRVHICLLGDGKQRCELEKQASGLT FT NISFMGRQHNMGDWFAAADLLIHPSYTEGLGSVILEGMSTGLPAIGSRAGGIPNIIEHE FT KSGLLIEPGNSTELAEHIEKIANNATLKEHLIEGGWEKLTAFMIEHTAALYFKVYQRAL FT QHD" FT CDS 227036..227524 FT /transl_table=11 FT /gene="coaD" FT /locus_tag="VSAL_I0186" FT /old_locus_tag="TVS0056" FT /product="phosphopantetheine adenylyltransferase" FT /EC_number="2.7.7.3" FT /db_xref="GOA:B6EPN7" FT /db_xref="InterPro:IPR001980" FT /db_xref="InterPro:IPR004820" FT /db_xref="InterPro:IPR004821" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:B6EPN7" FT /protein_id="CAQ77871.1" FT /translation="MTKLTLYPGTFDPITNGHLDLIKRSAAMFEHIIVAVAASPSKNTL FT FTLDERVQLVQEVTQDLPNVSVEGFSGLMVDFARQKQANLLVRGLRTTMDFEYEFGLTS FT MYRKLMPELESVFLTPSEEYAFLSSTIVREVALHGGSVEAFVPSVVNQALIHKVKSPV" FT misc_feature 227051..227440 FT /gene="coaD" FT /locus_tag="VSAL_I0186" FT /note="HMMPfam hit to PF01467, Cytidylyltransferase, score FT 4e-36" FT /inference="protein motif:HMMPfam:PF01467" FT misc_feature 227072..227497 FT /gene="coaD" FT /locus_tag="VSAL_I0186" FT /note="HMMPfam hit to PF08218, Citrate lyase ligase FT C-terminal domain, score 0.0044" FT /inference="protein motif:HMMPfam:PF08218" FT CDS complement(227568..229547) FT /transl_table=11 FT /locus_tag="VSAL_I0187" FT /old_locus_tag="TVS0055" FT /product="membrane protein" FT /db_xref="GOA:B6EPB4" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:B6EPB4" FT /protein_id="CAQ77872.1" FT /translation="MSFQQNFKQLSRTIWLSVFIATAIMSVGRLVFLANIGDMAELTHR FT GGDLWRALFTGLRFDLKIVVIGFVPLLLIGLVLAIFPKAYRFFVRIIPWYAGLIFFIVT FT GFSIGNYYYYLTYGNYIDVFIFGLADDDTKAVLANAWADYPIFLSFISSVIVAFFSAII FT VRSAVNKMQQWEWKLQHKGIISVSVFVMILTIFFFARGTLGSHPLKRYHAQISDYKVLN FT SITPNGLIALEWAKSDYKKQNKFHSVNKVDLEAQFTKVVGNSTGQFTTPYNAYLAENKP FT HVVMALMEGMGTNVLVEDNYPENDLLGALRPTFESGFVFKRFLAETPATINTLVNMLGQ FT SNVPTISHSSAQKVEVAAAAARPYKAAGYKTIFITATNGMWRNVANYLPSQGFDEILDE FT NAILKAFPEAEAFRGEWGLSDEYAFKLAEKELKEATQPLMIYILTITNHTPYEVPENYD FT VKPLKVSERLLERMGSGEEEATRLLETYQYANNALGEFIMDIKQSPLGESTLIAATGDH FT KLRGFTMQYPDDLAIINAVPFYLYVPEKIQHQVPYIYNEKVVGSHKDIFPTLYAFSLSE FT ATYYSLGGENMLSTTDTNRFGYNPEMTLIEQGIYMNKQPDRLYPWVSEVAITPESISNN FT GKLLDKDYHTLQTLYINSQVKGVH" FT CDS complement(229584..230402) FT /transl_table=11 FT /gene="mutM" FT /locus_tag="VSAL_I0188" FT /old_locus_tag="TVS0054" FT /product="formamidopyrimidine-DNA glycosylase" FT /EC_number="4.2.99.18" FT /db_xref="GOA:B6EPB5" FT /db_xref="InterPro:IPR000191" FT /db_xref="InterPro:IPR000214" FT /db_xref="InterPro:IPR010663" FT /db_xref="InterPro:IPR010979" FT /db_xref="InterPro:IPR012319" FT /db_xref="InterPro:IPR015886" FT /db_xref="InterPro:IPR020629" FT /db_xref="UniProtKB/TrEMBL:B6EPB5" FT /protein_id="CAQ77873.1" FT /translation="MPELPEVETSRLGITPHLQGQTIKAITVRTEKLRWPIPQELQKLV FT GQRIQSIRRRAKYLMIDTPEGTAIIHLGMSGSLRILDEAIPTAKHDHVDLVLDSGKLLR FT YNDPRKFGAWLYSEVGVSHDVLAKLGPEPLTDVFNVEYLAEKAKNKKIVVKQFIMNNTI FT VVGVGNIYASESLFMAKINPKAPVGTLTLAQIERLVSDIKKVLETAIKQGGTTLKDFNQ FT VDGKPGYFAQELQVYGRAGEACLICQSLIQEQKIGQRNTFWCEKCQPINQ" FT misc_feature complement(230061..230288) FT /gene="mutM" FT /locus_tag="VSAL_I0188" FT /note="HMMPfam hit to PF01149, Formamidopyrimidine-DNA FT glycosylase N-, score 7.9e-47" FT /inference="protein motif:HMMPfam:PF01149" FT CDS complement(230590..231048) FT /transl_table=11 FT /locus_tag="VSAL_I0189" FT /old_locus_tag="TVS0001c" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPP0" FT /protein_id="CAQ77874.1" FT /translation="MKKPSRRKYNNILMIAVLVFIGVLQAPQLIKTYLLEPEQQVDTVT FT GVQPLFEGSNTIQKMHFADYDPAPDTSETVSQLIEHWFTLQGTVLNEESVKVLKTKLPA FT PSTVEAWLEKQEEPQRITIYQAPNFWMMQNWQGEWIAVSGEEGYLFRN" FT misc_feature complement(230962..231015) FT /locus_tag="VSAL_I0189" FT sig_peptide complement(230971..231048) FT /locus_tag="VSAL_I0189" FT CDS complement(231313..231480) FT /transl_table=11 FT /gene="rpmG" FT /locus_tag="VSAL_I0190" FT /old_locus_tag="TVS0001b" FT /product="50S ribosomal protein L33" FT /db_xref="GOA:B6EPP1" FT /db_xref="InterPro:IPR001705" FT /db_xref="InterPro:IPR011332" FT /db_xref="InterPro:IPR018264" FT /db_xref="UniProtKB/Swiss-Prot:B6EPP1" FT /protein_id="CAQ77875.1" FT /translation="MAKGAREKIKLVSTANTGHFYTTDKNKRNMPGKMEIKKFDPVVRQ FT HVLYKEAKIK" FT misc_feature complement(231361..231420) FT /gene="rpmG" FT /locus_tag="VSAL_I0190" FT /note="PS00582 Ribosomal protein L33 signature." FT /inference="protein motif:ProSite:PS00582" FT CDS complement(231494..231730) FT /transl_table=11 FT /gene="rpmB" FT /locus_tag="VSAL_I0191" FT /old_locus_tag="TVS0001a" FT /product="50S ribosomal protein L28" FT /db_xref="GOA:B6EPP2" FT /db_xref="InterPro:IPR001383" FT /db_xref="UniProtKB/Swiss-Prot:B6EPP2" FT /protein_id="CAQ77876.1" FT /translation="MSRVCQVTGKRPAVGNNRSHAKNATKRRFLPNLQTHRFWVESEKR FT FVKLRLTAKGMRIIDKKGIDVVLSEMRARGENV" FT CDS complement(231926..232600) FT /transl_table=11 FT /gene="radC" FT /locus_tag="VSAL_I0192" FT /old_locus_tag="TVS0001" FT /product="DNA repair protein RadC" FT /db_xref="InterPro:IPR001405" FT /db_xref="InterPro:IPR010994" FT /db_xref="InterPro:IPR020891" FT /db_xref="UniProtKB/Swiss-Prot:B6EPP3" FT /protein_id="CAQ77877.1" FT /translation="MSLMNLPEESRPREKLLALGPKSLTDAELLAIFLRTGIKGMNAIE FT LADKLLKEFGSLRKLLGSNENEFCSHKGLGTAKFAQLQAVVEMTERYLFEKIEKEDALT FT SPEHTKRYLTRILRDRHREAFYVLFLDNQHRVLKGEVLFEGTIDAAAVYPREVVKRSID FT YNAAAIILAHNHPSGVAEPSQADRRITKRISDAVELVDIRVLDHFVIGDGEIVSFAERG FT WI" FT misc_feature complement(231929..232303) FT /gene="radC" FT /locus_tag="VSAL_I0192" FT /note="HMMPfam hit to PF04002, RadC, DNA repair FT protein,score 1.8e-75" FT /inference="protein motif:HMMPfam:PF04002" FT CDS 232816..234036 FT /transl_table=11 FT /gene="coaBC" FT /locus_tag="VSAL_I0193" FT /old_locus_tag="TVS0002" FT /product="coenzyme A biosynthesis bifunctional protein FT CoaBC [includes: phosphopantothenoylcysteine decarboxylase; FT phosphopantothenate--cysteine ligase]" FT /EC_number="6.3.2.5" FT /note="Possible alternative upstream translational start FT sites" FT /db_xref="GOA:B6EPP4" FT /db_xref="InterPro:IPR003382" FT /db_xref="InterPro:IPR005252" FT /db_xref="InterPro:IPR007085" FT /db_xref="UniProtKB/TrEMBL:B6EPP4" FT /protein_id="CAQ77878.1" FT /translation="MASLSGKRILLGISGGIAAYKCAELTRRLIERGAEVRVVMTTAAK FT EFITPLTMQAVSGHPVADSLLDPAAEASMGHIELAKWADIVLLAPATADLIARMAAGMG FT NDLLSTLVLATDSPIAVSPAMNQQMYANLATQENIATLTRRGMHIWGPAAGQQACGDVG FT MGRMLEPMELVHLCEDFFQPKALEGQSLLITAGPTREALDPVRYISNHSSGKMGFAIAE FT AAAQLGAKVTLISGPVNLATPANVERIDIESAEQMHSAVMSNASSHSLFIACAAVADFR FT PSQVATQKMKKTADNDGMTITMVKNPDIVASVAAMTEQRPFTVGFAAETQEVEKYARGK FT LERKNLDMICANDVSIQGQGFNSDNNALHLYWKGGDKALPLTAKSELGKAIMLEIVERL FT ETIRCAN" FT misc_feature 232834..233187 FT /gene="coaBC" FT /locus_tag="VSAL_I0193" FT /note="HMMPfam hit to PF02441, Flavoprotein, score 1.9e-43" FT /inference="protein motif:HMMPfam:PF02441" FT misc_feature 233371..233913 FT /gene="coaBC" FT /locus_tag="VSAL_I0193" FT /note="HMMPfam hit to PF04127, DNA / pantothenate FT metabolism flavoprote, score 8e-44" FT /inference="protein motif:HMMPfam:PF04127" FT misc_feature 233605..233637 FT /gene="coaBC" FT /locus_tag="VSAL_I0193" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 234260..234850 FT /transl_table=11 FT /gene="slmA" FT /locus_tag="VSAL_I0194" FT /old_locus_tag="TVS0003" FT /product="HTH-type regulatory protein, TetR-family" FT /db_xref="GOA:B6EPP5" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR015893" FT /db_xref="InterPro:IPR023769" FT /db_xref="UniProtKB/TrEMBL:B6EPP5" FT /protein_id="CAQ77879.1" FT /translation="MTTTKKINRRDEILQSLAQMLESNEGASRITTAKLAKQVGVSEAA FT LYRHFPSKAKMFEGLIEFIEESLFSRINRIIEDEKDTLKRIELLLKLLLAFAERNPGLT FT RIMTGHALMFENERLRERINQIFERIELQFKQILRERMIREGKAFPVDEGILAAQLVGQ FT VEGSFCRFVRSDFKYQPTANFNEYWALLSAQIQ" FT misc_feature 234296..234439 FT /gene="slmA" FT /locus_tag="VSAL_I0194" FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 8.7e-10" FT /inference="protein motif:HMMPfam:PF00440" FT misc_feature 234347..234412 FT /gene="slmA" FT /locus_tag="VSAL_I0194" FT /note="Predicted helix-turn-helix motif with score FT 2248.000, SD 6.84 at aa 30-51, sequence FT ITTAKLAKQVGVSEAALYRHFP" FT CDS 234906..235847 FT /transl_table=11 FT /gene="htrB" FT /locus_tag="VSAL_I0195" FT /old_locus_tag="TVS0004" FT /product="lipid A biosynthesis lauroyl acyltransferase" FT /EC_number="2.3.1.-" FT /db_xref="GOA:B6EPP6" FT /db_xref="InterPro:IPR004960" FT /db_xref="InterPro:IPR011920" FT /db_xref="UniProtKB/TrEMBL:B6EPP6" FT /protein_id="CAQ77880.1" FT /translation="MMSKYQAPTFSYSLLHPKYWGVWFGFGLLFTIVTILPYKATYKLA FT RGLGFLGLKVSTSRAHVARRNLELAFPEMTPSEREAIVIENFKNSGLAIFETAMAWVWP FT DWRIEKHFSYENVQHLLDFEKEKKGVLVVIVHALNLELTCRAMAAVSPGYGVYRPHNNP FT AYDFIQYWGRTSHGNQTIDRKDVKGMIRKLRNGERVCYLPDHDYNRNKSVFVPFFAVPD FT ACTTIGTDILISASQCAVITASGFRTYNNYHLNIDHDISDQLPKNDPTGVATVMNQAVE FT RVILRGIPQWMWLHKRFKTMEDPSIKKGIRYD" FT misc_feature 234924..235805 FT /gene="htrB" FT /locus_tag="VSAL_I0195" FT /note="HMMPfam hit to PF03279, Bacterial lipid A FT biosynthesis acyltr, score 6.9e-82" FT /inference="protein motif:HMMPfam:PF03279" FT misc_feature 234963..235031 FT /gene="htrB" FT /locus_tag="VSAL_I0195" FT CDS 235883..236350 FT /transl_table=11 FT /gene="greB" FT /locus_tag="VSAL_I0196" FT /old_locus_tag="TVS0005" FT /product="transcription elongation factor GreB" FT /db_xref="GOA:B6EPP7" FT /db_xref="InterPro:IPR001437" FT /db_xref="InterPro:IPR006358" FT /db_xref="InterPro:IPR018151" FT /db_xref="InterPro:IPR022691" FT /db_xref="InterPro:IPR023459" FT /db_xref="UniProtKB/TrEMBL:B6EPP7" FT /protein_id="CAQ77881.1" FT /translation="MKTNLITREGFNKLQDELTFLWKEDRPEVTKKVTWAASLGDRSEN FT ADYQYNKKRLREIDRRVRYLRKRLDQVKVVDYSPQQDGKVFFGAFVVIENEQGDTLSFR FT IVGPDEIFGRHDYISIDSPMARALIKKEVDEEAIVKTPEGDKEWFVNSIKY" FT misc_feature 235883..236104 FT /gene="greB" FT /locus_tag="VSAL_I0196" FT /note="HMMPfam hit to PF03449, Prokaryotic transcription FT elongation fact, score 1.5e-38" FT /inference="protein motif:HMMPfam:PF03449" FT misc_feature 235901..236026 FT /gene="greB" FT /locus_tag="VSAL_I0196" FT /note="PS00829 Prokaryotic transcription elongation factors FT signature 1." FT /inference="protein motif:ProSite:PS00829" FT misc_feature 236120..236347 FT /gene="greB" FT /locus_tag="VSAL_I0196" FT /note="HMMPfam hit to PF01272, Prokaryotic transcription FT elongation fact, score 6.6e-34" FT /inference="protein motif:HMMPfam:PF01272" FT misc_feature 236237..236287 FT /gene="greB" FT /locus_tag="VSAL_I0196" FT /note="PS00830 Prokaryotic transcription elongation factors FT signature 2." FT /inference="protein motif:ProSite:PS00830" FT CDS 236541..238877 FT /transl_table=11 FT /locus_tag="VSAL_I0197" FT /old_locus_tag="TVS0006" FT /product="putative RNA binding protein" FT /note="Similar to Escherichia coli S1 RNA binding domain FT (PDB 1SRO), evalue=5e-09 identity=(31, 75). Expression may FT be regulated by Fur" FT /db_xref="GOA:B6EPP8" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR006641" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018974" FT /db_xref="InterPro:IPR022967" FT /db_xref="InterPro:IPR023097" FT /db_xref="InterPro:IPR023319" FT /db_xref="InterPro:IPR023323" FT /db_xref="UniProtKB/TrEMBL:B6EPP8" FT /protein_id="CAQ77882.1" FT /translation="MIINIIAKELNVRPQQVAAAVQLIDEGSTIPFIARYRKEVTEGLD FT DTQLRTLDTRLTYLRELDDRRKSILKSIKEQEKLTPELEREILDADSKTRLEDLYLPFK FT RKRRTKGQIAIEAGIEPLADLLWTRPENTPEEAAQSYINADNGFADTKAVLDGARAILM FT ERMAEDANLLEKVRNYLTSNAELSSKMVDGQEHTGEKFKDYFEHNEKLTRVPSHRALAM FT LRGRNEGFLQLSINADPNQEEGVRGSYCEIIIANHYGVTLGSQPADLWRKQVISWTWRI FT KILMHMETELMGALKERSEDEAIDVFATNLKDLLMAAPAGLKTTLGLDPGLRTGTKVAV FT VDATGKVLATDTIYQNQPHNKTAQSAQIIETLIKRHNVDLIAIGNGTASRETDAFVGDL FT LKKSGLSATKIIVSEAGASVYSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKID FT PKAIGVGQYQHDVSQSQLAKKLDAVIEDCVNAVGVDVNTASSALLTRVAGLSTTIAQNI FT VDYRDENGRFENRITLKKVARLGPKAFEQCAGFLRVMNGKNPLDASAVHPEAYPVVKTI FT AEKNGKAIDAIIGNTEFLRSVSANDYISADFGLPTVTDIISELDKPGRDPRPEFKTATF FT ADGVNTVSDLELGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSDTFVSDPREVVKA FT GDIVKVKVMEVDAQRKRIALTMRLNDQPGEDTRPQRQSNQPQQRNERTQAPRPSSSARQ FT QRSNNDVGNAAMGGAFAAAFAKAKK" FT misc_feature 238470..238691 FT /locus_tag="VSAL_I0197" FT /note="HMMPfam hit to PF00575, S1 RNA binding domain,score FT 5.6e-25" FT /inference="protein motif:HMMPfam:PF00575" FT CDS complement(239187..239666) FT /transl_table=11 FT /locus_tag="VSAL_I0198" FT /old_locus_tag="TVS0007" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPP9" FT /protein_id="CAQ77883.1" FT /translation="MNFSINSVNVPLIAPSVNLPTEQVARENRIKKPVVPTTKMSETTS FT EKAIKGDDKQHKRDAWEPSDHPGYDVMEEKSKSKPHIGTLYDIDDDLAKLARLLSLDTY FT AQGEGTGYTMRFNLPKELLEKLAEMGRMVRRRSVISFHYDKAVVPNNPSDILAVL" FT CDS complement(239701..240486) FT /transl_table=11 FT /gene="bioH" FT /locus_tag="VSAL_I0199" FT /old_locus_tag="TVS0008" FT /product="carboxylesterase BioH" FT /EC_number="3.1.1.1" FT /db_xref="GOA:B6EPQ0" FT /db_xref="InterPro:IPR010076" FT /db_xref="UniProtKB/Swiss-Prot:B6EPQ0" FT /protein_id="CAQ77884.1" FT /translation="MTTSLYWQTEGEGSDLVLIHGWGMNGAVWQPIVEKLSSQYRVHTV FT DLSGYGYSAELGSADFDEMVAQVLAQAPEKSAWLGWSLGGLIATQAALTAPDRVSQLIT FT VASSPRFAAEKGWRGIKSAVLSQFTEQLKEDFTLTVERFMTLQAMGSPNAKQDIKQVKR FT AVLSRPAPNPSALATGLTILADIDLRESLSQLTMPVCRMYGRLDGLVPIKVAHDMDAFI FT PHSTKVVFEQASHAPFISHSDEFITELHRFLQPEDEFLI" FT misc_feature complement(239734..240369) FT /gene="bioH" FT /locus_tag="VSAL_I0199" FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase FT fold,score 2.7e-26" FT /inference="protein motif:HMMPfam:PF00561" FT misc_feature complement(240049..240078) FT /gene="bioH" FT /locus_tag="VSAL_I0199" FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT /inference="protein motif:ProSite:PS00339" FT CDS join(240515..240799,241807..242241) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0200" FT /old_locus_tag="TVS0009" FT /product="hypothetical protein (pseudogene)" FT /function="could be involved in gluconate metabolism by FT similarity to E.coli" FT /note="Similar to Escherichia coli Protein GntX FT UniProt:P46846 (227 aa) fasta scores: E()=4.9e-19, 35.398% FT id in 226 aa. CDS is disrupted by the insertion of an IS FT element after codon 95" FT /db_xref="PSEUDO:CAQ77885.1" FT /inference="similar to sequence:UniProt:P46846" FT repeat_region 240800..241804 FT /note="VSa6" FT repeat_region 240800..240818 FT /note="IR of VSa6" FT CDS 240896..241777 FT /transl_table=11 FT /locus_tag="VSAL_I0201" FT /old_locus_tag="TVS0010" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ77886.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 241223..241717 FT /locus_tag="VSAL_I0201" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 241786..241804 FT /note="IR of VSa6" FT CDS join(242708..243046,243048..244100) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0202" FT /old_locus_tag="TVS0013" FT /product="membrane permease (pseudogene)" FT /note="Similar to Vibrio fischeri Xanthine permease FT UniProt:Q5E8N5 (463 aa) fasta scores: E()=1.2e-133,93.043% FT id in 460 aa. CDS contains a framshift after codon 115. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ77887.1" FT /inference="similar to sequence:UniProt:Q5E8N5" FT misc_feature order(242777..243046,243048..243962) FT /locus_tag="VSAL_I0202" FT /note="HMMPfam hit to PF00860, Permease family, score FT 4.1e-130" FT /inference="protein motif:HMMPfam:PF00860" FT misc_feature 242807..242875 FT /locus_tag="VSAL_I0202" FT misc_feature order(243072..243131,243150..243218,243276..243329, FT 243348..243407,243450..243518,243729..243797, FT 243810..243878,243897..243950,243993..244052) FT /locus_tag="VSAL_I0202" FT misc_feature 243801..243863 FT /locus_tag="VSAL_I0202" FT /note="PS01116 Xanthine/uracil permeases family signature." FT /inference="protein motif:ProSite:PS01116" FT CDS complement(244329..245636) FT /transl_table=11 FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT /old_locus_tag="TVS0015" FT /product="sensor outer membrane protein EnvZ" FT /db_xref="GOA:B6EPQ4" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:B6EPQ4" FT /protein_id="CAQ77888.1" FT /translation="MKSTFARTLLLLASLLIASQIFSYLAVFNYALLPSLQQFNRILAY FT EVRLMLAEDVTLKNGTNIQLGQPLRRQLLEQLGVSIHDEHDPEMREFYQASPVEFLSEE FT MSRELESPTEVRLILGADSYVLWMKTEAMPEFYMRIPLSELQEEDFAPLFRNSLFIALL FT VILGGWAFIRIQNRPLMALQTAARKVGKGEIPEPLPEKGASEIQAVTRAFNQMAKGIQQ FT LEQDRALLMAGVSHDIRTPLTRIRLATEMMSPQDDYLAESMIKDTEECNEIIGQFMDYL FT KPVAKQDFIDVDINTIVNEVILAEGGYEREIKTNLANIPQSVHGNAIAIKRVITNLVVN FT AIRYGGDWIAVSTRVSADHKTAWIIIEDNGPGIDEAQLESVFEPFTRGDTARGSEGTGL FT GLAIVKRIVGQHQGEVSLANRREGGLKVQVKLPLGR" FT misc_feature complement(244335..244664) FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HSP90, score 2.4e-35" FT /inference="protein motif:HMMPfam:PF02518" FT misc_feature complement(244779..244961) FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain, score 1.1e-10" FT /inference="protein motif:HMMPfam:PF00512" FT misc_feature complement(244971..245180) FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT /note="HMMPfam hit to PF00672, HAMP domain, score 2.2e-12" FT /inference="protein motif:HMMPfam:PF00672" FT misc_feature complement(order(245121..245180,245541..245609)) FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT sig_peptide complement(245568..245636) FT /gene="envZ" FT /locus_tag="VSAL_I0203" FT CDS complement(245950..246669) FT /transl_table=11 FT /gene="ompR" FT /locus_tag="VSAL_I0204" FT /old_locus_tag="TVS0016" FT /product="response regulator homolog OmpR" FT /db_xref="GOA:B6EPQ5" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EPQ5" FT /protein_id="CAQ77889.1" FT /translation="MQENHKILVVDDDARLRSLLERYLSEQGFQVRSVANSEQMDRLLA FT RETFHLMVLDLMLPGEDGLSICRRLRSNNNMLPILMLTAKGDEIDRIVGLEVGADDYLP FT KPFNPRELLARIRAVLRRQVIEAPGAPSAEDKMVEFGEFRLNLGTREMFRNEEPMPLTS FT GEFAVLKSLVTNMREPMSRDKLMNMARGREYSAMERSIDVQISRLRRMIEVDSSRPRYI FT QTVWGLGYVFVPDGAEG" FT misc_feature complement(245974..246204) FT /gene="ompR" FT /locus_tag="VSAL_I0204" FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C te, score 2.7e-14" FT /inference="protein motif:HMMPfam:PF00486" FT misc_feature complement(246319..246657) FT /gene="ompR" FT /locus_tag="VSAL_I0204" FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 4.7e-40" FT /inference="protein motif:HMMPfam:PF00072" FT CDS 246879..247619 FT /transl_table=11 FT /locus_tag="VSAL_I0205" FT /old_locus_tag="TVS0018" FT /product="putative partitioning protein ParA" FT /note="Similar to Pseudomonas aeruginosa Partitioning FT protein ParA UniProt:Q4W1V5 (212 aa) fasta scores: FT E()=3.2e-05, 28.571% id in 168 aa" FT /db_xref="InterPro:IPR002586" FT /db_xref="UniProtKB/TrEMBL:B6EPQ6" FT /inference="similar to sequence:UniProt:Q4W1V5" FT /protein_id="CAQ77890.1" FT /translation="MLVGYKRAQCKKVLVINRKGGAGKSTFAIAMASFYAHQNVKTEII FT DLDPQGTSYFWGNKSEGVRTTKFLPSSNVPFSLALRLEADTKITVIDSPSNFSQFEMEK FT YISMVDKIVFPVQPSPIDVHSMLGFIKDLIKSPAFKNNRVELAFVITRCKENKQGTEFI FT HKVLQHMKYPLLGSMSESQAYQNMFSEKNSFLISHPELDKELWQRMKLWLDVDMTPPQT FT LAPETTKVAEPKPTTYRSLLKRRY" FT CDS complement(247781..248290) FT /transl_table=11 FT /gene="pyrE" FT /locus_tag="VSAL_I0206" FT /old_locus_tag="TVS0019" FT /product="orotate phosphoribosyltransferase" FT /EC_number="2.4.2.10" FT /db_xref="GOA:B6EPQ7" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR004467" FT /db_xref="InterPro:IPR023031" FT /db_xref="UniProtKB/TrEMBL:B6EPQ7" FT /protein_id="CAQ77891.1" FT /translation="MKAYQREFIEFALEKEVLKFGEFTLKSGRISPYFFNAGLFNTGRD FT LARLGRFYAAALVESGIDYDVLFGPAYKGIPIATTTAVALADHHDTDKPYCFNRKEAKN FT HGEGGNLVGSALEGRIMLVDDVITAGTAIRESMEIIQANGADLAGVLWQSIAKKKAKAN FT YLRFKK" FT misc_feature complement(247782..248185) FT /gene="pyrE" FT /locus_tag="VSAL_I0206" FT /note="HMMPfam hit to PF00156, Phosphoribosyl transferase FT domain, score 4.5e-32" FT /inference="protein motif:HMMPfam:PF00156" FT misc_feature complement(247895..247933) FT /gene="pyrE" FT /locus_tag="VSAL_I0206" FT /note="PS00103 Purine/pyrimidine phosphoribosyl FT transferases signature." FT /inference="protein motif:ProSite:PS00103" FT CDS complement(248525..249241) FT /transl_table=11 FT /gene="rph" FT /locus_tag="VSAL_I0207" FT /old_locus_tag="TVS0020" FT /product="ribonuclease PH" FT /EC_number="2.7.7.56" FT /db_xref="GOA:B6EPI9" FT /db_xref="InterPro:IPR001247" FT /db_xref="InterPro:IPR002381" FT /db_xref="InterPro:IPR015847" FT /db_xref="InterPro:IPR018336" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:B6EPI9" FT /protein_id="CAQ77892.1" FT /translation="MRPSGRTAQQVRPITITRHFTAHAEGSVLVEFGNTKVICTASVEE FT NVPRWLKGKGKGWVTAEYGMLPRATHTRNNREAASGKQGGRTMEIQRLIARSLRAAVDL FT EALGEQMITVDCDVIQADGGTRTASITGASVALADAINHMIASGKLKKNPMKGHVAAVS FT VGIYKGEAICDLEYLEDSAADTDMNVVMMEDGKMIEVQGTAEVAPFSHQELLDMLALAQ FT QGINDIIEKQKAALAE" FT misc_feature complement(248570..248773) FT /gene="rph" FT /locus_tag="VSAL_I0207" FT /note="HMMPfam hit to PF03725, 3' exoribonuclease FT family,domain, score 2.3e-18" FT /inference="protein motif:HMMPfam:PF03725" FT misc_feature complement(248813..249214) FT /gene="rph" FT /locus_tag="VSAL_I0207" FT /note="HMMPfam hit to PF01138, 3' exoribonuclease FT family,domain, score 1.8e-57" FT /inference="protein motif:HMMPfam:PF01138" FT misc_feature complement(248858..248896) FT /gene="rph" FT /locus_tag="VSAL_I0207" FT /note="PS01277 Ribonuclease PH signature." FT /inference="protein motif:ProSite:PS01277" FT CDS 249413..250276 FT /transl_table=11 FT /locus_tag="VSAL_I0208" FT /old_locus_tag="TVS0021" FT /product="outer membrane protein" FT /db_xref="InterPro:IPR005229" FT /db_xref="InterPro:IPR013527" FT /db_xref="InterPro:IPR013551" FT /db_xref="UniProtKB/TrEMBL:B6EPJ0" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ77893.1" FT /translation="MIYSMTAYARREVKGDWGTAVWEIRSVNQRYLETYFRMPEQFRGL FT EPVLRERFRKRLARGKVECHLRFESNNAASSELKINEDLARQVIKAAQWVKTESGEGGI FT NPFQVLQWQGVMEAPEQDFDSINKELLAEFELAVNDFVEARASEGENMKALIVQRLDAI FT TTEAAKVRARMPEILEWQRNRLLTKFEDAKIELDSGRVEQELILLAQKSDVAEELDRLD FT SHVKETTNVMKKGGACGRKLDFMMQEFNREANTLASKSISTDVTASGVELKVLIEQMRE FT QIQNIE" FT misc_feature 249416..249877 FT /locus_tag="VSAL_I0208" FT /note="HMMPfam hit to PF03755, YicC-like family,N-terminal FT region, score 8.1e-75" FT /inference="protein motif:HMMPfam:PF03755" FT misc_feature 250010..250273 FT /locus_tag="VSAL_I0208" FT /note="HMMPfam hit to PF08340, Domain of unknown function FT (DUF1732), score 4.1e-58" FT /inference="protein motif:HMMPfam:PF08340" FT CDS complement(250359..250787) FT /transl_table=11 FT /locus_tag="VSAL_I0209" FT /old_locus_tag="TVS0022" FT /product="phosphate-starvation-inducible E" FT /db_xref="GOA:B6EPJ1" FT /db_xref="InterPro:IPR009315" FT /db_xref="InterPro:IPR020948" FT /db_xref="UniProtKB/TrEMBL:B6EPJ1" FT /protein_id="CAQ77894.1" FT /translation="MPSHLPKSFSKPFLKIFHILEAVLLVAITLATVFAMVNEFVHVFS FT ERQIQLTDILLMFIYLEVLAMVQQFVMNGKIPVRYPIYIAMMAIARYITLGMKELDAVL FT VVWLALAAFILAAATLLIRAGHYYWPYETHESSKKYDE" FT misc_feature complement(250368..250787) FT /locus_tag="VSAL_I0209" FT /note="HMMPfam hit to FT PF06146,Phosphate-starvation-inducible E, score 1.8e-58" FT /inference="protein motif:HMMPfam:PF06146" FT misc_feature complement(order(250416..250484,250503..250562, FT 250575..250643,250677..250745)) FT /locus_tag="VSAL_I0209" FT sig_peptide complement(250677..250787) FT /locus_tag="VSAL_I0209" FT CDS 250943..251566 FT /transl_table=11 FT /gene="gmk" FT /locus_tag="VSAL_I0210" FT /old_locus_tag="TVS0023" FT /product="5'guanylate kinase" FT /EC_number="2.7.4.8" FT /db_xref="GOA:B6EPJ2" FT /db_xref="InterPro:IPR008144" FT /db_xref="InterPro:IPR008145" FT /db_xref="InterPro:IPR017665" FT /db_xref="InterPro:IPR020590" FT /db_xref="UniProtKB/TrEMBL:B6EPJ2" FT /protein_id="CAQ77895.1" FT /translation="MSKGTLYIVSAPSGAGKSSLISALIESNPTYAMKVSVSHTTRGMR FT PGEQDGVHYHFMQKEHFEDLIEKEEFLEYAEVFGNYYGTSRVWIEETLDKGIDVFLDID FT WQGARQIRIQMPLAKSLFILPPSNGELERRLNVRGQDSEAVIAKRMSEAKSEISHYNEY FT DYVIINDDFDTAQMDFKAIIRAERLKQDKQTSKYKGMLSALLAD" FT misc_feature 250973..250996 FT /gene="gmk" FT /locus_tag="VSAL_I0210" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 251060..251113 FT /gene="gmk" FT /locus_tag="VSAL_I0210" FT /note="PS00856 Guanylate kinase signature." FT /inference="protein motif:ProSite:PS00856" FT misc_feature 251063..251377 FT /gene="gmk" FT /locus_tag="VSAL_I0210" FT /note="HMMPfam hit to PF00625, Guanylate kinase, score FT 3.4e-47" FT /inference="protein motif:HMMPfam:PF00625" FT CDS 251679..251951 FT /transl_table=11 FT /gene="rpoZ" FT /locus_tag="VSAL_I0211" FT /old_locus_tag="TVS0024" FT /product="DNA-directed RNA polymerase, omega chain" FT /EC_number="2.7.7.6" FT /db_xref="GOA:B6EPJ3" FT /db_xref="InterPro:IPR003716" FT /db_xref="InterPro:IPR006110" FT /db_xref="InterPro:IPR012293" FT /db_xref="UniProtKB/Swiss-Prot:B6EPJ3" FT /protein_id="CAQ77896.1" FT /translation="MARVTVQDTVEKIGNRFDLVLVSSRRARQLQTGGKDALVPEENDK FT PTVIALREIEEGLITKDLLDARERQEQQEQDAAELAAVSSITHNR" FT misc_feature 251712..251873 FT /gene="rpoZ" FT /locus_tag="VSAL_I0211" FT /note="HMMPfam hit to PF01192, RNA polymerase Rpb6, score FT 2.2e-20" FT /inference="protein motif:HMMPfam:PF01192" FT CDS 252018..254147 FT /transl_table=11 FT /gene="spoT" FT /locus_tag="VSAL_I0212" FT /old_locus_tag="TVS0025" FT /product="guanosine-3',5'-bisbis(diphosphate) FT 3'-pyrophosphydrolase" FT /EC_number="3.1.7.2" FT /db_xref="GOA:B6EPJ4" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR004095" FT /db_xref="InterPro:IPR004811" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR007685" FT /db_xref="InterPro:IPR012675" FT /db_xref="InterPro:IPR012676" FT /db_xref="UniProtKB/TrEMBL:B6EPJ4" FT /protein_id="CAQ77897.1" FT /translation="MDLFDSLKDVAKDYLPEPHIEALRRSYLVAKEAHEGQTRSTGEPY FT IIHPVAVARILAEMRLDHKTLMAALLHDVIEDTQVSKEELAEQFGDTVAELVDGVSKLD FT KLKFRDKKEAQAENFRKMVMAMVQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETL FT EIFSPLAHRLGIHNIKTELEELGFEALYPNRYRVLKEVVKSARGNRKEMIQKIHAEIEG FT RIAEAGIKGRVVGREKNLFAIYHKMKNKEQRFHTIMDIYAFRVITDDVDTCYRALGQVH FT SIYKPRPGRIKDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMEQMANKGVAAHWS FT YKEGDNSSSTTAQIRAQRWMQSLLELQQSAGSSFEFIENVKSDLFPNEIYVFTPKGRIF FT ELPVGATAVDFAYAVHSDVGNSCVGSRVNRQPYPLSKPLKSGQTVEIISAPGARPNAAW FT LNYVVTSKARTKIRQVLKTMRKEDSVILGRRLLNHALGHNLSLDDVSEENMTHVLSDLK FT LATQDDLLAAIGLGELMSIVVARRLLGDADELTQQNPSNIETSTGKKLPIRGADGILLT FT FANCCRPIPGDHIIAHVSPGRGLVVHMEDCANVRGYQKELDKYMGVEWADEFDQEFATA FT LDIDLQNHQGALANLTNVVASTGSNIRGISTEEKDGRLYTVTIELTAKDRTHLAEIMRR FT IRVMPHALKVRRHKN" FT misc_feature 252150..252449 FT /gene="spoT" FT /locus_tag="VSAL_I0212" FT /note="HMMPfam hit to PF01966, HD domain, score 5.5e-16" FT /inference="protein motif:HMMPfam:PF01966" FT misc_feature 252720..253052 FT /gene="spoT" FT /locus_tag="VSAL_I0212" FT /note="HMMPfam hit to PF04607, Region found in RelA / SpoT FT proteins, score 1.3e-43" FT /inference="protein motif:HMMPfam:PF04607" FT misc_feature 253182..253361 FT /gene="spoT" FT /locus_tag="VSAL_I0212" FT /note="HMMPfam hit to PF02824, TGS domain, score 2.3e-26" FT /inference="protein motif:HMMPfam:PF02824" FT misc_feature 253917..254138 FT /gene="spoT" FT /locus_tag="VSAL_I0212" FT /note="HMMPfam hit to PF01842, ACT domain, score 0.00013" FT /inference="protein motif:HMMPfam:PF01842" FT CDS 254408..254977 FT /pseudo FT /transl_table=11 FT /gene="trmH" FT /locus_tag="VSAL_I0213" FT /old_locus_tag="TVS0025a" FT /product="tRNA (guanosine-2'-o-)-methyltransferase FT (fragment)" FT /EC_number="2.1.1.34" FT /note="Similar to Escherichia coli tRNA FT guanosine-2'-O-methyltransferase TrmH UniProt:P0AGJ2 (229 FT aa) fasta scores: E()=1.1e-45, 68.783% id in 189 aa. CDS is FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:P0AGJ2" FT misc_feature 254462..254884 FT /gene="trmH" FT /locus_tag="VSAL_I0213" FT /note="HMMPfam hit to PF00588, SpoU rRNA Methylase FT family,score 2.6e-53" FT /inference="protein motif:HMMPfam:PF00588" FT repeat_region complement(254976..257290) FT /note="VSa2" FT repeat_region complement(254976..254999) FT /note="IR of VSa2" FT CDS complement(254992..256479) FT /transl_table=11 FT /locus_tag="VSAL_I0214" FT /old_locus_tag="TVS0026" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EHG8" FT /protein_id="CAQ77899.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT CDS complement(256551..256898) FT /transl_table=11 FT /locus_tag="VSAL_I0215" FT /old_locus_tag="TVSb0116" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77900.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS complement(256895..257209) FT /transl_table=11 FT /locus_tag="VSAL_I0216" FT /old_locus_tag="TVS0028" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77901.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT repeat_region complement(257267..257290) FT /note="IR of VSa2" FT CDS complement(257294..258475) FT /transl_table=11 FT /gene="hemY" FT /locus_tag="VSAL_I0217" FT /old_locus_tag="TVS0029" FT /product="protein HemY" FT /db_xref="GOA:B6EPJ8" FT /db_xref="InterPro:IPR010817" FT /db_xref="InterPro:IPR011990" FT /db_xref="UniProtKB/TrEMBL:B6EPJ8" FT /protein_id="CAQ77902.1" FT /translation="MIRLLLLAIVLVGGLIVGTTFADQQGYVLISVAEITIEMSLTTLV FT LFIGALIAGLFLLEIVVKRILSVSNFTRGWFSARHLRKARYNTFKGMIKLHEGEWKEAE FT RLITKGGRHNDFPLLNYLAAAEAAQGRQHIEQRDAYLKLASEQPGSHLAVALTSAKLQM FT REEQYEFALATLQSVNVDYPHNPVLLDLLKDCYLALNEWQALKNIIHPLTKGNLITEQQ FT ALELEEKVECGILALIATNKGTTGLLDHWQSLPKKLKKHIPILVCLIRQLHNRKADSEA FT YILLRDNLKKRNDDRLIELLPTLNLPDYHPATVLLEDLARYDIRNPIIQSTLAQLYMRT FT QKWQPAREHFEAALAIREDMSDYAYLARVLDKQNRKQAAADISRKALTMVDDI" FT misc_feature complement(257396..257497) FT /gene="hemY" FT /locus_tag="VSAL_I0217" FT /note="HMMPfam hit to PF07719, Tetratricopeptide FT repeat,score 0.00091" FT /inference="protein motif:HMMPfam:PF07719" FT misc_feature complement(258077..258475) FT /gene="hemY" FT /locus_tag="VSAL_I0217" FT /note="HMMPfam hit to PF07219, HemY protein FT N-terminus,score 1.6e-41" FT /inference="protein motif:HMMPfam:PF07219" FT misc_feature complement(order(258302..258370,258413..258472)) FT /gene="hemY" FT /locus_tag="VSAL_I0217" FT sig_peptide complement(258410..258475) FT /gene="hemY" FT /locus_tag="VSAL_I0217" FT CDS complement(258472..259686) FT /transl_table=11 FT /gene="hemX" FT /locus_tag="VSAL_I0218" FT /old_locus_tag="TVS0030" FT /product="putative uroporphyrin-III C-methyltransferase FT HemX" FT /note="Similar to Escherichia coli Putative FT uroporphyrin-III C-methyltransferase HemX UniProt:P09127 FT (393 aa) fasta scores: E()=1.5e-36, 32.718% id in 379 aa. FT Possible alternative translational start site after codon FT 25" FT /db_xref="GOA:B6EPJ9" FT /db_xref="InterPro:IPR007470" FT /db_xref="UniProtKB/TrEMBL:B6EPJ9" FT /inference="similar to sequence:UniProt:P09127" FT /protein_id="CAQ77903.1" FT /translation="MTKDNNKPQSAEEKSSNSATAPSSQIPKKETEKHVQPTTSKAPSN FT KEEPIVDKKSRRLGTVAIIISILLSGGAFLASQQQVTQQQLKIAQLQQQLKNADSTFNE FT KLVTAEQRITDKADDIVRKATVLIQQQDKSIASLQLAIADVKGRRPNDWLLAEADYLVK FT MAGRKLWLEHDVVSATRLMENADQRISALNDPSLMPLRRAMASDISTLKAIPLIDRDGL FT VLKLNSLEQQINTLPLASAILPEAGVVEQKEVSTNINDWQSNLMQSLDDFAGHFITYRV FT REGNVIPLLSPEQHFYLKENIKGKLLLASKALYREQSEVYVTSLESAKLWSSQYFQQDD FT PAVKSFMAQLDSLTKFKVDVRYPQKMKTQALLSDFISERLRRNIQAVGTTTPETKTATI FT EGGKS" FT misc_feature complement(258475..258498) FT /gene="hemX" FT /locus_tag="VSAL_I0218" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(258508..259626) FT /gene="hemX" FT /locus_tag="VSAL_I0218" FT /note="HMMPfam hit to PF04375, HemX, score 7.3e-104" FT /inference="protein motif:HMMPfam:PF04375" FT misc_feature complement(259456..259515) FT /gene="hemX" FT /locus_tag="VSAL_I0218" FT CDS complement(259699..260445) FT /transl_table=11 FT /gene="hemD" FT /locus_tag="VSAL_I0219" FT /old_locus_tag="TVS0031" FT /product="uroporphyrinogen III synthase HemD" FT /EC_number="4.2.1.75" FT /db_xref="GOA:B6EPK0" FT /db_xref="InterPro:IPR003754" FT /db_xref="UniProtKB/TrEMBL:B6EPK0" FT /protein_id="CAQ77904.1" FT /translation="MTILVTRPEQESQALCDALHQAGHLAISHPLLTIHPGRELSQLPS FT LFSSLSDGDFIIAVSQHAVEHAQNSLQMQQTEWKKGVNYIAVGQKSAQHLKKYVVDTVH FT FPTHSDSEHLLALPVLKNTKGKKALILRGNGGRDLIFQALDNSGVEVSYCETYQRKNTP FT FNGALKAAEWQKEHVDTIIVTSGEQLSFFTEQFTLIHLHWVLHCRLLVPSERINQLAQQ FT LGYQHIETVGGASNSDVLHYLSEHHA" FT misc_feature complement(259723..260418) FT /gene="hemD" FT /locus_tag="VSAL_I0219" FT /note="HMMPfam hit to PF02602, Uroporphyrinogen-III FT synthase HemD, score 5.5e-21" FT /inference="protein motif:HMMPfam:PF02602" FT CDS complement(260447..261382) FT /transl_table=11 FT /gene="hemC" FT /locus_tag="VSAL_I0220" FT /old_locus_tag="TVS0032" FT /product="porphobilinogen deaminase HemC" FT /EC_number="2.5.1.61" FT /db_xref="GOA:B6EPK1" FT /db_xref="InterPro:IPR000860" FT /db_xref="InterPro:IPR022417" FT /db_xref="InterPro:IPR022418" FT /db_xref="InterPro:IPR022419" FT /db_xref="UniProtKB/Swiss-Prot:B6EPK1" FT /protein_id="CAQ77905.1" FT /translation="MSQQLPVRIATRKSPLALWQAHFVKDALQAAHPGLEVELVTMVTK FT GDIILDTPLAKIGGKGLFVKELEVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICERGD FT PRDAFVSNTYNNIDELPQGATVGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLQKLDDG FT NYDAIILACAGLIRLGLEDRIKSSIEPEQSLPAVGQGAVGIETRLNDDRIRALLAPLNH FT PETAHRVLCERAMNNRLEGGCQVPIGSYSLIDGDQIWLRALVGEPDGSIMVRGETTGPV FT SDAEELGTKLAEQLLNDGAKDILDRLYADA" FT misc_feature complement(260486..260707) FT /gene="hemC" FT /locus_tag="VSAL_I0220" FT /note="HMMPfam hit to PF03900, Porphobilinogen FT deaminase,C-terminal, score 6.6e-30" FT /inference="protein motif:HMMPfam:PF03900" FT misc_feature complement(260639..260689) FT /gene="hemC" FT /locus_tag="VSAL_I0220" FT /note="PS00533 Porphobilinogen deaminase cofactor-binding FT site." FT /inference="protein motif:ProSite:PS00533" FT misc_feature complement(260729..261367) FT /gene="hemC" FT /locus_tag="VSAL_I0220" FT /note="HMMPfam hit to PF01379, Porphobilinogen FT deaminase,dipyrometh, score 8.5e-140" FT /inference="protein motif:HMMPfam:PF01379" FT CDS 261640..264150 FT /transl_table=11 FT /gene="cya" FT /locus_tag="VSAL_I0221" FT /old_locus_tag="TVS0033" FT /product="adenylate cyclase" FT /EC_number="4.6.1.1" FT /db_xref="GOA:B6EPK2" FT /db_xref="InterPro:IPR000274" FT /db_xref="InterPro:IPR024685" FT /db_xref="InterPro:IPR024686" FT /db_xref="UniProtKB/TrEMBL:B6EPK2" FT /protein_id="CAQ77906.1" FT /translation="MHTYIETLIARQKRLTEQRVERALALMKPLAQEIFHQLPLLLHFN FT HSELPGFIEGAPSGIKKFHANQKQREWMAELTLRYPLSTSNQENILGLYSMGSTSSIGQ FT TVASDLDIWVCIPEHLTPEKKALLQQKCDAITEWALQFYIEANFFLMEQNRFRDAYSEE FT MTGDNCGSSQHLLLLDEFYRTAVCLGGQQLLWQIIPPEMEESYDEYVAQLCESGVIKRD FT EWVDFGRLNHIPAEEYFGSSLWQLYKSIDSPFKSVLKAILLEAYSWEYPHTQLLSIDSK FT RRFFADEPDLYGMDAYYLMLEKVTRYLERTNDLSRLELVRRSFYLKTHEKLSRRQVQDS FT VEWRRKALTELTTQWGWSQSTIVELDSRRTWKVEQVKKAHNDLLEALMQSYRNLIRFAR FT NNDITSSISPEDISILARKLYAAFEELPGKVTLLNPQISPDLHESDLSFIEVPENGVNK FT PGWYVYKQPLIAKELMGAKHLEHNKYLSKLVAWAFFNGLLTESTRLDAVVRNADLNIDK FT FYQMVSDLRNTFSVHSPRPTKEELASPCEVRQLSIFINLESDPTEELTIKAERATQSDA FT DIFSCGKEQHNLVGSVDLVYRNSWHEVRTLNFSGETAILDALKTVLCKMHQDAERPESV FT DVFCYSKQMRGIIRNNIYQLLAECLELRLKPVENSEKRRRFKGIKIGSTMYGLFFERRG FT VSIQKLEDSVQFYSSISTNKAIGSTSVPLDRRGILIPDVVDSFASEGLIQFFFDDIEKG FT FNIYVLDEENNVEIYHDCYGSKDDMVNSINHYYTSSRNNVDLESPDKVNFNLPQFYDLA FT YCENREASIVPYRSGQQQSKVKQA" FT misc_feature 261640..264132 FT /gene="cya" FT /locus_tag="VSAL_I0221" FT /note="HMMPfam hit to PF01295, Adenylate cyclase, FT class-I,score 0" FT /inference="protein motif:HMMPfam:PF01295" FT misc_feature 262348..262383 FT /gene="cya" FT /locus_tag="VSAL_I0221" FT /note="PS01092 Adenylate cyclases class-I signature 1." FT /inference="protein motif:ProSite:PS01092" FT CDS 264252..266456 FT /transl_table=11 FT /gene="uvrD" FT /locus_tag="VSAL_I0222" FT /old_locus_tag="TVS0034" FT /product="DNA helicase II UvrD" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6EPK3" FT /db_xref="InterPro:IPR000212" FT /db_xref="InterPro:IPR005753" FT /db_xref="InterPro:IPR013986" FT /db_xref="InterPro:IPR014016" FT /db_xref="InterPro:IPR014017" FT /db_xref="UniProtKB/TrEMBL:B6EPK3" FT /protein_id="CAQ77907.1" FT /translation="MDVSFLLDGLNDKQREAVAAPLENMLVLAGAGSGKTRVLVHRIAW FT LMQIEQASPFSIMSVTFTNKAAAEMRGRIEELMHGSAGGMWNGTFHGICHRILRAHYLD FT AKLPEGFQIIDSDDQQRLLKRLIKAQNLDDKNWPARQAAWFINGKKDEGLRPHQINSFN FT DPIAETWLKVYRAYQEACDRSGLVDFAEILLRAHELLRDHQYICEHYQARFKHILVDEF FT QDTNNIQYAWLRMMAGSDCKVMIVGDDDQSIYGWRGAQIENIQRFLNEFVGAKTILLEQ FT NYRSTANILNAANELISNNTERMGKELWTEDADGELISIYSAYNEMDEARFAVGKIKEW FT RDNGGALEDTAFLYRNNAQSRVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYLRLMN FT NRNDDAAFERVVNTPTRGLGDKTLETVRLAARERGATMWQASIALIEEQVLPGRAAGAL FT GRFVELINALEDDTRDCRLHEQTDQVIKSSGLFTMYEQEKGEKSKARIENLEELVTATR FT QFDKPEEAEEMTDLTAFLTHAALEAGDGQADEFEDAVQLMTLHSAKGLEFPLVFMVGVE FT EGMFPSQMSAEEAGRLEEERRLCYVGMTRAMEKLYILYAETRRVYGQEKFHKPSRFIKE FT ISAKFVEEVRMKAKVSRTSLYGSYGSQSESSQERFGQTAMSNSFNETGYNLGQRVKHPK FT FGEGTIINFEGAGPQGRVQVAFNGEGIKWLVTQYAKLESV" FT misc_feature 264279..265721 FT /gene="uvrD" FT /locus_tag="VSAL_I0222" FT /note="HMMPfam hit to PF00580, UvrD/REP helicase, score FT 1.8e-207" FT /inference="protein motif:HMMPfam:PF00580" FT misc_feature 264336..264359 FT /gene="uvrD" FT /locus_tag="VSAL_I0222" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(267419..268336) FT /transl_table=11 FT /gene="rarD" FT /locus_tag="VSAL_I0223" FT /old_locus_tag="TVS0035" FT /product="chloramphenicol-sensitive protein RarD" FT /db_xref="GOA:B6EPK4" FT /db_xref="InterPro:IPR000620" FT /db_xref="InterPro:IPR004626" FT /db_xref="UniProtKB/TrEMBL:B6EPK4" FT /protein_id="CAQ77908.1" FT /translation="MPTTELEQQRTRQGILLAIAAYTMWGIAPIYFKTINSVSPLEILS FT HRAIWSFFFLAGLLCVSKGWKTVLNTLKDKRKMTYLVTTGLLVGTNWLIFIWAVNNNHM FT LDASLGYYINPLLNVVLGMIFLGERLRKLQWVAVACAAIGVIVQLITFGSIPIVALALA FT CSFGFYGLLRKKVAMDAQSGLFIETLVMLPMAAIYLLFIADSATSSFTNNAMSLNLLLI FT AAGIITTIPLLCFTGAATRLKLSTLGFFQYIGPSLMFLLAVGLYGEEFSTDKAITFAFI FT WSALILFTGDALLYKKRNQKINTK" FT misc_feature complement(order(267452..267511,267539..267607, FT 267620..267688,267731..267787,267821..267874, FT 267887..267940,267959..268012,268040..268105, FT 268142..268198,268241..268300)) FT /gene="rarD" FT /locus_tag="VSAL_I0223" FT misc_feature complement(267845..267877) FT /gene="rarD" FT /locus_tag="VSAL_I0223" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature complement(267887..268270) FT /gene="rarD" FT /locus_tag="VSAL_I0223" FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 9.3e-10" FT /inference="protein motif:HMMPfam:PF00892" FT CDS 268514..270349 FT /transl_table=11 FT /gene="recQ" FT /locus_tag="VSAL_I0224" FT /old_locus_tag="TVS0036" FT /product="ATP-dependent DNA helicase RecQ" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6EPK5" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR002121" FT /db_xref="InterPro:IPR004589" FT /db_xref="InterPro:IPR006293" FT /db_xref="InterPro:IPR010997" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR018982" FT /db_xref="UniProtKB/TrEMBL:B6EPK5" FT /protein_id="CAQ77909.1" FT /translation="MSSITVEQPMEQVSQSQTVLRDVFGYQEFRVGQEEVINAVLEGKD FT SLVIMPTGGGKSLCYQIPALVFEGLTLVISPLISLMKDQVDQLKADGVQAECLNSTIDR FT DAQVSIWNRVNSGQIKMLYVSPERVMMRDFMDRLASLNLCMIAVDEAHCISQWGHDFRP FT EYASLGQIKQRFPNVPIMALTATADEATRKDILSRLSLPNPHEYLGSFDRPNIRYTVLE FT KHKPVSQIVRYLATQKNQCGVIYCGSRKKVEMLTEKLCNNHIRAASYHAGLDLDERNYV FT QEAFQRDDIQIVVATVAFGMGINKSNVRFVAHFDIPKNIESYYQETGRAGRDGLPAEAV FT MLYDPADIVWLRKLVEEKPEGPQKLVESHKLNAMTAFAEAQTCRRQVLLNYFGEYNPKP FT CGNCDVCLDPPKQFDGTEAAQKALSCVYRVNQSFGVGYVVEVLRGLKIARIREHGHDKL FT STYGIGKDNSHEYWVSIIRQLIHKGLLTQNITRNSTLQLTEEARPILKGQEPLELAVPR FT LDTAAKTAKSEKLNNRQYDKQLFAKLRKLRKSIADRDDLPPYVVFSDATLMDMADITPT FT SYGEMLAVNGVGQKKLEKYADPFLDLIEMHITGQG" FT misc_feature 268601..269098 FT /gene="recQ" FT /locus_tag="VSAL_I0224" FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score FT 9.1e-34" FT /inference="protein motif:HMMPfam:PF00270" FT misc_feature 269285..269515 FT /gene="recQ" FT /locus_tag="VSAL_I0224" FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 6.5e-28" FT /inference="protein motif:HMMPfam:PF00271" FT misc_feature 270110..270346 FT /gene="recQ" FT /locus_tag="VSAL_I0224" FT /note="HMMPfam hit to PF00570, HRDC domain, score 5e-25" FT /inference="protein motif:HMMPfam:PF00570" FT CDS 270353..270643 FT /transl_table=11 FT /locus_tag="VSAL_I0225" FT /old_locus_tag="TVS0037" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR022080" FT /db_xref="UniProtKB/TrEMBL:B6EPK6" FT /protein_id="CAQ77910.1" FT /translation="MSLFSVIEFDNNEGRIIFGIPPFDFDSFDVIGQQLVFAMDASIVE FT KQMDADLHSWLIDFEGCQFMLRAEHYSNSVWLEALARKEHQDELSFIAGLF" FT CDS 270782..271447 FT /transl_table=11 FT /locus_tag="VSAL_I0226" FT /old_locus_tag="TVS0038" FT /product="integral membrane protein" FT /db_xref="InterPro:IPR003744" FT /db_xref="UniProtKB/TrEMBL:B6EPK7" FT /protein_id="CAQ77911.1" FT /translation="MSTFTPAQQRNALSFLVLFHLVIIASSNYLVQIPFTLFWFHTTWG FT AFTFPFIFLATDLTVRIFGAKMARSIIFFVMLPALAVSYVLSVVFFEGQYQGLLHLSEF FT NLFVARIAVASFMAYLLGQILDVYVFNRLRQLKQWWIAPTCSTLFGNALDTLAFFAIAF FT YQSPDAFMAEHWTEIALVDYSIKLVISLGLFVPMYGVLLNYLIRKLTSEGHQLATQAS" FT misc_feature order(270818..270886,270914..270973,270992..271060, FT 271103..271171,271205..271273,271331..271399) FT /locus_tag="VSAL_I0226" FT misc_feature 270890..271342 FT /locus_tag="VSAL_I0226" FT /note="HMMPfam hit to PF02592, Uncharacterized ACR, YhhQ FT family COG1738, score 4.8e-71" FT /inference="protein motif:HMMPfam:PF02592" FT misc_RNA 271600..271779 FT /gene="ryhB" FT /locus_tag="VSAL_I3102s" FT /old_locus_tag="VSsrna22" FT /product="small RNA RyhB" FT /note="small RNA RyhB" FT /experiment="Northern blot and 5`RACE" FT CDS 272158..274962 FT /transl_table=11 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /old_locus_tag="TVS0039" FT /product="DNA polymerase I" FT /EC_number="2.7.7.7" FT /db_xref="GOA:B6EPK8" FT /db_xref="InterPro:IPR001098" FT /db_xref="InterPro:IPR002298" FT /db_xref="InterPro:IPR002421" FT /db_xref="InterPro:IPR002562" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR008918" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR018320" FT /db_xref="InterPro:IPR019760" FT /db_xref="InterPro:IPR020045" FT /db_xref="InterPro:IPR020046" FT /db_xref="UniProtKB/TrEMBL:B6EPK8" FT /protein_id="CAQ77912.1" FT /translation="MARIPDNPFILVDGSSYLFRAYHAAPNFTNGNGEPTGAVYGVINM FT LRSLLKQFETNRIAVIFDAKGKTFRNDMYPEYKANRPPMPDELRCQIEPLHKLIKAMGL FT PLISISGVEADDVIGTLASQASKAGIPVLISTGDKDMAQLVDENVTLINTMTNVIMGPE FT GVVEKFGVPPELIIDYLALMGDASDNIPGVPGIGDKTARALLQGVGGLDTLYANLDDIA FT PLGFRGSKGMAKKLEENKEGAYLSYKLATIKLDVELEQQPEELVKQEPNVDELIQMFGQ FT MNFKRWLTEMLDGSDGKIVSHETSAHRTTSSSSDEGDSAEEETIVAAQVDRSKYETIFT FT KEAFSAWLEKVNNAEVTAFDTETDSLDYMVANLIGLSFSVEEGEAAYVPVAHDYLDAPE FT QLDRDWVLAQLKPYLEDETKAKVGQNLKYDASVLARYDIEMKGIKFDTMLESYVYNSVA FT GKHNMDSLALRYLQHNTISFEEIAGKGKKQLTFNQIALEEAAPYAAEDADITLRLHNVL FT HAKLVTDEKLNAVFTDIELPLISVLSRMERKGVYIDDMLLSAQSLEIGQRLDELETASF FT EVAGQEFNMNSPKQLQTILFEKMELPVIKKTPSGAASTNEEVLQELALEYELPKLILEY FT RGLAKLKSTYTDKLPKMINPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPIRNKEGRRI FT RQAFVAPHGWKILAVDYSQIELRIMAHLSQDRALLEAFSAGKDIHAATAAEVKGVSIEE FT VTSEDRRRAKAINFGLIYGMSAFGLAKQIGISRGEAQDYMNVYFERYPGVMQYMEETRL FT LATEQGYVETLYGRRLYLPEINARNAIRRKAAERAAINAPMQGTAADIIKKAMILVDNW FT IEAEGTGRVNLLMQVHDELVFEVKEDELEAITKQVTALMEAAVSLDVPLIAESGFGDNW FT DEAH" FT misc_feature 272176..272664 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /note="HMMPfam hit to PF02739, 5'-3' exonuclease,N-terminal FT resolvase-, score 1.5e-87" FT /inference="protein motif:HMMPfam:PF02739" FT misc_feature 272668..272988 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /note="HMMPfam hit to PF01367, 5'-3' exonuclease,C-terminal FT SAM fold, score 4.2e-48" FT /inference="protein motif:HMMPfam:PF01367" FT misc_feature 273160..273723 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /note="HMMPfam hit to PF01612, 3'-5' exonuclease, score FT 7.1e-55" FT /inference="protein motif:HMMPfam:PF01612" FT misc_feature 273811..274956 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /note="HMMPfam hit to PF00476, DNA polymerase family FT A,score 3.2e-201" FT /inference="protein motif:HMMPfam:PF00476" FT misc_feature 274432..274491 FT /gene="polA" FT /locus_tag="VSAL_I0227" FT /note="PS00447 DNA polymerase family A signature." FT /inference="protein motif:ProSite:PS00447" FT misc_RNA 275173..275291 FT /gene="spot 42" FT /locus_tag="VSAL_I3103s" FT /old_locus_tag="VSsrna23" FT /product="small RNA Spot 42" FT /note="small RNA Spot 42 (RF00021) predicted by Rfam,score FT 81.85" FT /experiment="Northern blot and 5`RACE" FT misc_RNA 275570..275630 FT /gene="sRNA2" FT /locus_tag="VSAL_I3104s" FT /old_locus_tag="VSsrna24" FT /product="small RNA sRNA2" FT /note="small RNA sRNA2" FT /experiment="Northern blot and 5`RACE" FT CDS complement(275687..276361) FT /transl_table=11 FT /gene="engB" FT /locus_tag="VSAL_I0228" FT /old_locus_tag="TVS0040" FT /product="probable gtp-binding protein EngB" FT /function="necessary for normal cell division and for the FT maintenance of normal septation" FT /db_xref="GOA:B6EPK9" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR019987" FT /db_xref="UniProtKB/TrEMBL:B6EPK9" FT /protein_id="CAQ77913.1" FT /translation="MVSLETELTVSKIIHYQKTHFITSAPDIRHLPEDEGIEVAFAGRS FT NAGKSSALNRLTNQRSLAKTSKTPGRTQLINLFKVDENCHIVDLPGYGFAQVPIELKKK FT WQKSLGEYLQKRECLKGLVVLMDIRHPMKDLDQQLIYWAVDQAIPVQVLLTKADKLKSG FT ARQTQVLKIREASLEFGGEVAVDAFSSLKGIGVDLLRAKLDTWFAPAFEFDEEFIENID FT AE" FT misc_feature complement(275888..276253) FT /gene="engB" FT /locus_tag="VSAL_I0228" FT /note="HMMPfam hit to PF01926, GTPase of unknown FT function,score 3.2e-29" FT /inference="protein motif:HMMPfam:PF01926" FT misc_feature complement(276212..276235) FT /gene="engB" FT /locus_tag="VSAL_I0228" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 276622..277239 FT /transl_table=11 FT /locus_tag="VSAL_I0229" FT /old_locus_tag="TVS0041" FT /product="cytochrome c" FT /db_xref="GOA:B6EPL0" FT /db_xref="InterPro:IPR003088" FT /db_xref="InterPro:IPR009056" FT /db_xref="InterPro:IPR024167" FT /db_xref="UniProtKB/TrEMBL:B6EPL0" FT /protein_id="CAQ77914.1" FT /translation="MKKLALILTLLASCSTWAQGDIEAGKQKSVTCTACHGQEGNSTLT FT QYPNLAGQHAGYLEKQINEFKLGMQTQGKQGRMDPVMGAMAMAVSEEDAKDIAAYYASL FT PMADNTTPEDSIPAGKALYLAGDMERGITACVACHGPRGNGTSLSGFPKISGQHSDYVK FT AQLEKFRSADRANDMNGMMRDIAKKLTDDDIATLSQYVGGLH" FT sig_peptide 276622..276675 FT /locus_tag="VSAL_I0229" FT misc_feature 276631..276663 FT /locus_tag="VSAL_I0229" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 276685..276936 FT /locus_tag="VSAL_I0229" FT /note="HMMPfam hit to PF00034, Cytochrome c, score 1e-12" FT /inference="protein motif:HMMPfam:PF00034" FT CDS 277381..278025 FT /transl_table=11 FT /locus_tag="VSAL_I0230" FT /old_locus_tag="TVS0042" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPL1" FT /protein_id="CAQ77915.1" FT /translation="MMQFCPLCQHSQADNFHQDKHRRYYRCQQCYLIYVDEADRFDAEA FT EKAHYDCHENNLDDEGYKTFLSRFSEPLLQRVGKTPQQGLDFGCGPGPLLAHMMREAGH FT HIELYDIYYTPDKSVLTKQYDFVSCTEAIEHFYQPQNELELLLSLIKPGGWLGIMTKLA FT RDESAFATWHYKSDLTHVSFFSKDTFEFVAKRYQLDMEFVGEDVILLRKTQ" FT CDS 278025..278573 FT /transl_table=11 FT /locus_tag="VSAL_I0231" FT /old_locus_tag="TVS0043" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EPL2" FT /db_xref="InterPro:IPR007336" FT /db_xref="UniProtKB/TrEMBL:B6EPL2" FT /protein_id="CAQ77916.1" FT /translation="MSRTKKARTPGMASEPVVVTRNRTDRDVDSREIKRKKKRKGLKPG FT ARNVESDSEKARRFSQNKDPRIGSKKPIQLVVEEKKKSSKQERRLTNEQELAQLENDAQ FT LMVLLDRIDNGENLGMGLQKYVDEKLARIEHLMGRLGLLEDEETEEEIAEFPEFAAPKT FT KSDDDLLAEFDNFNMDDFK" FT misc_feature 278046..278570 FT /locus_tag="VSAL_I0231" FT /note="HMMPfam hit to PF04220, Protein of unknown function, FT DUF414, score 1.7e-47" FT /inference="protein motif:HMMPfam:PF04220" FT CDS 278576..279067 FT /transl_table=11 FT /locus_tag="VSAL_I0232" FT /old_locus_tag="TVS0044" FT /product="putative exported protein" FT /db_xref="InterPro:IPR019617" FT /db_xref="UniProtKB/TrEMBL:B6EPL3" FT /protein_id="CAQ77917.1" FT /translation="MTTVTLLALLGGAIILALAGYASSLLMKLKKQKELQERHRKLAIQ FT KRNANIFDNVVLLCQASLQEQCDYSEMSIRLYCIMDYLQDDDRIDVEKEYPALSELYHV FT VKDMPRGDKRQALAKQDRMKDNLIRTKAEARLQDAVKIEIQQLHDRIKPLNQKIDIKMI FT " FT sig_peptide 278576..278641 FT /locus_tag="VSAL_I0232" FT misc_feature 278585..278653 FT /locus_tag="VSAL_I0232" FT CDS 279179..280552 FT /transl_table=11 FT /gene="hemN" FT /locus_tag="VSAL_I0233" FT /old_locus_tag="TVS0046" FT /product="oxygen-independent coproporphyrinogen III FT oxidase" FT /EC_number="1.3.99.22" FT /db_xref="GOA:B6EPL4" FT /db_xref="InterPro:IPR004558" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR010723" FT /db_xref="InterPro:IPR023404" FT /db_xref="UniProtKB/TrEMBL:B6EPL4" FT /protein_id="CAQ77918.1" FT /translation="MSNQQIVWDQAIIEKYNYSGPRYTSYPTALEFHEAYTPAEFDMAC FT TQYPERPLSLYIHIPFCHKLCYFCGCNKVITRHHHKADIYLDSLELEIRQRAALFTDRK FT VTQLHFGGGTPTFLTKIQFTRLMNLLRGEFHFEAGAEISIEVDPREIELDMLDHLRDEG FT FNRLSIGVQDFNKEVQLLVNRDQDEDFIISMVQRAKELGFRSTNLDLIYGLPKQSAESL FT AITIKRVLEMEPGRLSVFNYAHMPTLFAAQRKIKDADLPAPAEKLVMLQDTIETLTGAG FT YQFIGMDHFALPDDELAVAQRDGILHRNFQGYTTQGECDLLGMGVSAISMIGDSYAQNK FT KDLKEYYAQVDDKRHALWRGVALDQDDLIRREVIKQLICNFTLDTKAIEVEFNLDFATY FT FAEDFKLLQTFVDDELVSLHEGRIDVELRGRLLIRNICMCFDKYLRDRARQQQFSRVI" FT misc_feature 279344..279865 FT /gene="hemN" FT /locus_tag="VSAL_I0233" FT /note="HMMPfam hit to PF04055, Radical SAM FT superfamily,score 1.5e-25" FT /inference="protein motif:HMMPfam:PF04055" FT misc_feature 280109..280471 FT /gene="hemN" FT /locus_tag="VSAL_I0233" FT /note="HMMPfam hit to PF06969, HemN C-terminal region,score FT 9.2e-49" FT /inference="protein motif:HMMPfam:PF06969" FT repeat_region 280688..283002 FT /note="VSa2" FT repeat_region 280688..280711 FT /note="IR of VSa2" FT CDS 280769..281083 FT /transl_table=11 FT /locus_tag="VSAL_I0234" FT /old_locus_tag="TVS0047" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77919.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 281080..281427 FT /transl_table=11 FT /locus_tag="VSAL_I0235" FT /old_locus_tag="TVSb0117" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77920.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 281499..282986 FT /transl_table=11 FT /locus_tag="VSAL_I0236" FT /old_locus_tag="TVS0050" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EHG8" FT /protein_id="CAQ77921.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 282979..283002 FT /note="IR of VSa2" FT CDS complement(283005..283310) FT /pseudo FT /transl_table=11 FT /gene="coaD" FT /locus_tag="VSAL_I0237" FT /old_locus_tag="TVS0051" FT /product="phosphopantetheine adenylyltransferase FT (fragment)" FT /EC_number="2.7.7.3" FT /note="Similar to Escherichia coli coad phosphopantetheine FT adenylyltransferase (ec 2.7.7.3 ) (pantetheine phosphate FT adenylyltransferase) (ppat) (dephospho-co FT pyrophosphorylase). UniProt:P0A6I6 (EMBL:ECKDTA) (159 aa) FT fasta scores: E()=3.2e-20, 58.824% id in 102 aa. CDS is FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:P0A6I6" FT misc_feature complement(283008..283295) FT /gene="coaD" FT /locus_tag="VSAL_I0237" FT /note="HMMPfam hit to PF01467, Cytidylyltransferase, score FT 3.3e-12" FT /inference="protein motif:HMMPfam:PF01467" FT CDS complement(283303..284334) FT /transl_table=11 FT /locus_tag="VSAL_I0238" FT /old_locus_tag="TVS0057b" FT /product="glycosyl tranferase" FT /EC_number="2.-.-.-" FT /note="Similar to Rhizobium meliloti lipopolysaccharide FT core biosynthesis glycosyl transferase LpsD UniProt:Q9R9N0 FT (EMBL:AF193023) (343 aa) fasta scores: E()=1e-10, 25.852% FT id in 352 aa" FT /db_xref="GOA:B6EPF4" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:B6EPF4" FT /inference="similar to sequence:UniProt:Q9R9N0" FT /protein_id="CAQ77923.1" FT /translation="MMKIYHVNLARGFSGGEQQTLALIQQHLKEKQNIAVIALTNSPFY FT NAISDLGCEVITVRHYLLGHTISLPKDAVLHVHEGHAIYWAALQHKVSQTPYIITRRLD FT NPIKKKWLTTFAYSNAAAIVGISTCVSEVVRQRLPQQHIMTIPDSPVTYPINHSEVANI FT RERFKDKFLVIQAGNMIPHKGFDVTVNAAMLLKDPRVHICLLGDGKQRCELEKQASGLT FT NISFMGRQHNMGDWFAAADLLIHPSYTEGLGSVILEGMSTGLPAIGSRAGGIPNIIEHE FT KSGLLIEPGNSTELAEHIEKIANNATLKEHLIEGGWEKLTAFMIEHTAALYFKVYQRAL FT QHD" FT CDS complement(284334..285116) FT /transl_table=11 FT /gene="waaE" FT /locus_tag="VSAL_I0239" FT /old_locus_tag="TVS0058" FT /product="glucosyl transferase" FT /db_xref="GOA:B6EPF5" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:B6EPF5" FT /protein_id="CAQ77924.1" FT /translation="MTTSSPTLAVALIVKNEAKHLKACLDTVADWVDEIVIMDSGSTDS FT TETIAREFTDKFIVNKEWPGFGKQRQLAQQHVTSDYVLWLDADERVTPELKTEILAAVK FT ANKTKTAYKINRSSSAFGKFIKHSGWSPDWVVRLYKTDETQYSDSLVHESVVIPNHIQV FT NALTGRLLHFTYDALQQYNAKNVMYIKSWVDQREGKKKGSLSGAFLHGFFCFIRMYILK FT RGFLDGRHGLLLATLSASVTFNRYADLWLRDYNKANKE" FT CDS complement(285116..286237) FT /transl_table=11 FT /locus_tag="VSAL_I0240" FT /old_locus_tag="TVS0059" FT /product="lipopolysaccharide core biosynthesis glycosyl FT transferase protein" FT /db_xref="GOA:B6EPF6" FT /db_xref="InterPro:IPR002201" FT /db_xref="UniProtKB/TrEMBL:B6EPF6" FT /protein_id="CAQ77925.1" FT /translation="MNVNSIILPHSFWVNIFMALFTSAPNSLCILRLSAIGDVCHAVAA FT VQAIQKEWPTTKITWIVGKIEAQLIHDLPGITVIPFDKKLGLKGMKAIWSQLNNQRFDA FT LIHMQLALRASVLTIGIKAKYKVGFNRKRAKEGQWLFTNRKIEDTASAHVLDSFYSFIE FT YLGVPKSEPTWNIPLSDDDFSFVNSHIPAEKPYVVISPAASKDERNWLTERYAQLSDWL FT TTQGYQVVLCGSPSDREKQLGDSIESLANSPLINLIGKTSLKQLTAVLKKATVVIAPDS FT GPAHIATTQATPVIGLYGHSNPKRTGPYNSLSYVVSVYEQHVTQQQNKPVNELKWSTRV FT KGEHIMQDITLDMVARSFQQLEIILNSTEEGKK" FT CDS 286562..287266 FT /transl_table=11 FT /gene="wavC" FT /locus_tag="VSAL_I0241" FT /old_locus_tag="TVS0061" FT /product="lipopolysaccharide core oligosaccharide FT biosynthesis protein WavC" FT /note="Similar to Vibrio cholerae WavC UniProt:Q8RJM8 (252 FT aa) fasta scores: E()=4e-62, 65.665% id in 233 aa" FT /db_xref="GOA:B6EPD9" FT /db_xref="InterPro:IPR010440" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR022826" FT /db_xref="UniProtKB/TrEMBL:B6EPD9" FT /inference="similar to sequence:UniProt:Q8RJM8" FT /protein_id="CAQ77926.1" FT /translation="MQKIQTTKQTIWYDDSILSDSPEQCCDPDYWQQQDKVIGSAQGRG FT TTWFVALDTMDAALRHYRRGGLFGKLIKDHYIFTGWEKTRSYQEFQLLNILIEAGVNVP FT KPIAARSIKRTFCYQADLLSEKIPHARDLVAILQEESLSKEIYQKIGAEIGKMHTAQVN FT HTDLNIHNILIDDKENVWIIDFDKCYQQEGSDWKESNLSRLNRSFHKEVNKRQIKWSED FT EWQHLFSGYNTI" FT CDS 287299..289152 FT /transl_table=11 FT /locus_tag="VSAL_I0242" FT /old_locus_tag="TVS0062" FT /product="membrane associated sulfatase" FT /db_xref="GOA:B6EPD8" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR012159" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR024588" FT /db_xref="UniProtKB/TrEMBL:B6EPD8" FT /protein_id="CAQ77927.1" FT /translation="MILNTLTFKQKLHSHGWFILINSLIAMAIATRYFAFLPEIPTDIL FT GFSFITSGTFSQMVLLVGLIGLVALPALAIRPAKIRNGLQALIASICIATLFIDILVFA FT QYRFHINAVVLELVLSGQVVSFPLITWVTVIGGVIALVVGQYLLISWLEKPAAITQHKL FT GRKFALITFFALLATHGIHIWAAANAYQPVTTVKRYLPAFYPATSTSMMKKYGWVNEEA FT IAQQKAMKLNRKSDLNYPLAPLQKEAVEKPINIMILTVDSWRADTFNAENTPNMWEYAQ FT SGVIFNNHIATGNATRTGIFGLFYGIPGTYWHGFLANQKTPALIDRLQELNYDMGIFTA FT AQLEKPEFNQTVFKNIPNLRIKSEGGSPSELDKDLTKDWLEWYSKRDTSKPAFSFLFYD FT APHGYDFPKDYAHRYEPMLDEINYLELSNDSDPTPFFNRYKTSVHFVDSVAKQVLDKLK FT ETGDLENTLVIITGDHGQEMNDNRMNFWGHNSNFTDAQVKVPFAIFGPKINGKALDWTA FT DDLTSHQDVVPTLMKNYLGVTNNIKDYSVGEDLLGKHVDRNWIMTSNYSGYAIIDKESI FT LEVGATGQYQLLDKTNRPMKDAELNYQHLQEALEQISRFSK" FT CDS 289174..290265 FT /transl_table=11 FT /gene="rmlB" FT /locus_tag="VSAL_I0243" FT /old_locus_tag="TVS0063" FT /product="dTDP-D-glucose-4,6-dehydratase" FT /db_xref="GOA:B6EPD7" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR005888" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPD7" FT /protein_id="CAQ77928.1" FT /translation="MNILVTGGAGFIGSAVIRHIISNTSNSVINVDSLTYAGNLESLSQ FT VEASDRYSFEHVDICNRTELDRIFSEYQPDAVMHLAAESHVDRSIDGPAAFIETNIVGT FT YTLLEATRAYWNLLADDKKQAFRFHHISTDEVYGDLEGTDDLFTETTPYEPSSPYSASK FT ASSDHLVRAWQRTYGLPTVITNCSNNYGPYHFPEKLIPLMILNALEGKYLPVYGNGMQI FT RDWLFVEDHARALYKVVTEGEIGETYNIGGHNEKANIEVVKTICSLLEELVPNKPEGVA FT QYLDLITYVTDRPGHDVRYAIDASKIEHELGWKPEESFESGIRKTVQWYLDNKQWWSRV FT LDGSYAGERLGVSSEQVVHKEIR" FT CDS 290265..291149 FT /transl_table=11 FT /gene="rmlA" FT /locus_tag="VSAL_I0244" FT /old_locus_tag="TVS0064" FT /product="glucose-1-phosphate thymidylyltransferase RmlA" FT /EC_number="2.7.7.24" FT /db_xref="GOA:B6EPD6" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR005907" FT /db_xref="UniProtKB/TrEMBL:B6EPD6" FT /protein_id="CAQ77929.1" FT /translation="MKGIVLAGGSGTRLYPLTRGVSKQLLPIYDKPMVFYPISTLMLAG FT IKDILIITTPEDNAGFKRLLGDGSDFGINLEYAIQPSPDGLAQAFIIGEEFIGDDPVCL FT VLGDNIFYGQSFSKTLKNAASRDLGATVFGYQVKDPERFGVVEFDEKMKAISIEEKPLK FT PKSNYAVTGLYFYDNRVVEMAKQVKPSHRGELEITTLNEMYLNDGSLNVELLARGFAWL FT DTGTHESLHEASSFVQTIEHIQGLKVACLEEISWRNGWLSDEQILDLATPMMKNEYGQY FT LTRLINDNKQKEL" FT CDS join(291149..291349,291359..292048) FT /pseudo FT /transl_table=11 FT /gene="rmlD" FT /locus_tag="VSAL_I0245" FT /old_locus_tag="TVS0065" FT /product="dTDP-4-dehydrorhamnose reductase (pseudogene)" FT /note="Similar to Vibrio cholerae FT DTDP-6-deoxy-L-mannose-dehydrogenase rmlD UniProt:Q842N3 FT (291 aa) fasta scores: E()=2.3e-59, 58.108% id in 296 aa. FT CDS contains two nonsense mutations (TAA) and (TAA) after FT codon 67. The sequence has been checked and is believed to FT be correct" FT /db_xref="PSEUDO:CAQ77930.1" FT /inference="similar to sequence:UniProt:Q842N3" FT CDS 292059..292616 FT /transl_table=11 FT /gene="rmlC" FT /locus_tag="VSAL_I0246" FT /old_locus_tag="TVS0067" FT /product="dTDP-4-dehydrorhamnose 3,5-epimerase" FT /db_xref="GOA:B6EPD4" FT /db_xref="InterPro:IPR000888" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:B6EPD4" FT /protein_id="CAQ77931.1" FT /translation="MNVIDTNIPDVKIFEPTVFGDERGFFMETWSQKKFEELVTGKPTQ FT FVQDNHSKSKKGILRGLHYQTENTQGKLVRVVSGEVFDVVVDIRENSPTFGQWVGTYLS FT AENKHQLWVPEGFAHGFYVTSEDAEFVYKCTDYYNPKSEISIAWDDKAIGIEWPITTPP FT QLSEKDKNAMILSQVTPIKQED" FT CDS 292617..293456 FT /transl_table=11 FT /gene="wavT" FT /locus_tag="VSAL_I0247" FT /old_locus_tag="TVS0068" FT /product="putative glycosyl transferase" FT /db_xref="GOA:B6EPD3" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:B6EPD3" FT /protein_id="CAQ77932.1" FT /translation="MLKPKASLIIAFYNNTVCLELIFKALSTQTESNFEVIIADDGSKQ FT EAIDFINTRKESLPFTVKHVWHEDKGFRKNRILNHAVLKSSSDYLIIIDGDCIPEKHFI FT EDHFNNAEKGRSLSGRRVELPELYTQRVMNSVSPGAFFSENKLEILIRYMLSNGDKQTK FT GRHIEKGLRFAKLWQQSLFKGKKAKAILGCNFSLFKEDLLKINGFDMRYEAPAVGEDSD FT VDYRLNLVGVTNKSLNGLAVQIHLYHPWLDRVSGNWDILRDTMKHERYWADSGINDC" FT CDS complement(join(293443..293697,293701..294162)) FT /pseudo FT /transl_table=11 FT /gene="wavS" FT /locus_tag="VSAL_I0248" FT /old_locus_tag="TVS0069" FT /product="lipopolysaccharide biosynthesis protein WavS FT (pseudogene)" FT /note="Similar to Vibrio cholerae WavS UniProt:Q8RTH0 (222 FT aa) fasta scores: E()=3.6e-13, 39.161% id in 143 aa. CDS FT contains a nonsense mutation (TAA) after codon 152. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ77933.1" FT /inference="similar to sequence:UniProt:Q8RTH0" FT CDS 294239..295381 FT /transl_table=11 FT /gene="rffA" FT /locus_tag="VSAL_I0249" FT /old_locus_tag="TVS0070" FT /product="lipopolysaccharide biosynthesis protein RffA" FT /db_xref="GOA:B6EPD1" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR012749" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EPD1" FT /protein_id="CAQ77934.1" FT /translation="MIPFNKPPVTDNEISYIDQAIKSGCLAGDGHFSKKCETWFENATG FT AQKTLLTPSCTHALEMAALLIDIQPGDEVIMPSYTFVSTANAFVLRGAKIIFVDVHPET FT MNINENLIEAAITKKTKAIVPVHYAGVACEMDLIMSLAHKYSLFVIEDAAQGVMSTYKG FT KALGSIGHLGAFSFHETKNYTSGGEGGLLLINDSRFIKRAEILREKGTNRSQFFRGMVD FT KYSWVDVGSSFLPSEIQSAYLWAQLGSADKINKKRLSDWLFYFNKLLPFQHEGLIDLPH FT IPEEVKHNAHMFYIKVENLEVRTQVLNKLKDRGILAVFHYIPLHSSIAGLQFGRFHAED FT KYTTEESERLLRLPMFYNLLESERELVCNELIKILKEIQS" FT CDS 295378..296499 FT /transl_table=11 FT /locus_tag="VSAL_I0250" FT /old_locus_tag="TVS0071" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPD0" FT /protein_id="CAQ77935.1" FT /translation="MIDIKDKHVFFIADNDRFFYLYADALIHRAKISPESLVVIVFPML FT GHMDNLNKIEQVTYAQINPEVIASALDAKTITFMSLHKGNSSYVKQVLELNESIVDKVH FT IFLADDEVDRWGRVFKKHDNIVEDNKALIGRDDIWVLGKINKFIAHKKTFEQKLVTLLK FT RETIEFIDAGVIFDTLPTLESECLRQAYIKNKIVADSEKKILIGTKQKSFDLRTIISII FT KECTAVLGDEYKFLILWHKKQRKERMFLDLHLIYLRHIKRKTVDVSYVTALNPLGYTAL FT VMSCSHIILQGRGGASTARQFIKWAGGIVCIQEDTANNFGFRDALGLDILSFESSKELA FT SKIKEEKISLQLNAERTQDEEKRSIQELFRLYN" FT CDS 296617..297807 FT /transl_table=11 FT /locus_tag="VSAL_I0251" FT /old_locus_tag="TVS0072" FT /product="capsular polysaccharide biosynthesis protein" FT /db_xref="GOA:B6EPC9" FT /db_xref="InterPro:IPR003869" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPC9" FT /experiment="The expressed protein is found to be exported FT (extracellular) by Aliivibrio salmonicida" FT /protein_id="CAQ77936.1" FT /translation="MNPILSLIGRTDALFTQDIASHEAELSRIVSQSRFLVLGGAGSIG FT QAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFI FT KADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTD FT KAANPVNMMGASKRIMEMFLMRKSEKMAISTARFANVAFSDGSLLHGFNQRIQKNQPIV FT APNDIKRYFVTPQESGELCLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQIGYE FT PHLCDSEDEARELAKTLPAQGKWPCLFTSSDTTGEKDFEEFFTDKETLDMARFDNLGII FT KNDPLYQQELLALFEQKIGQMKSDRQWTKEEIVQLFFTMIPDFGHKETGKYLDSKM" FT CDS 297831..298976 FT /transl_table=11 FT /locus_tag="VSAL_I0252" FT /old_locus_tag="TVS0073" FT /product="DegT/DnrJ/EryC1/StrS aminotransferase" FT /db_xref="GOA:B6EPC8" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EPC8" FT /protein_id="CAQ77937.1" FT /translation="MNKTPLVEFVRDIYQTNDFIPLHAPTFDGNEQKYVLETIQSTFVS FT SVGKFVDEFEQKIESYTGTAKAVATVNGTAALHAALYMAGVQHGDFVITQALTFVATCN FT ALHHMGAEPIFVDVSPVSLGLCPKAMDEYLTQHAQVTETGCIHSQTKRPIRAVVPMHTF FT GHPVELDELIAVCHKWNITLVEDAAESLGSFYKGKHTGTLGDFGAVSFNGNKIITTGGG FT GMVLCKTAELGARTKHVTTTAKVPHPYEFYHDEAGFNYRMPNLNAALGCAQMEVLEPYL FT AQKRVLANRYQDFFAESDFQFVSEPEYAQSNYWLNAVICPSVDARNDILKQTNESGVMT FT RPIWQLMHRLPMFKEAPRGDLTQSEYIEAHLINLPSTPVAL" FT CDS 299014..300198 FT /transl_table=11 FT /locus_tag="VSAL_I0253" FT /old_locus_tag="TVS0074" FT /product="UDP-N-acetylglucosamine 2-epimerase" FT /EC_number="5.1.3.-" FT /note="Similar to Campylobacter coli PtmD UniProt:Q7X522 FT (391 aa) fasta scores: E()=1.7e-50, 42.010% id in 388 aa" FT /db_xref="GOA:B6EPC7" FT /db_xref="InterPro:IPR003331" FT /db_xref="InterPro:IPR020004" FT /db_xref="UniProtKB/TrEMBL:B6EPC7" FT /inference="similar to sequence:UniProt:Q7X522" FT /protein_id="CAQ77938.1" FT /translation="MSQLFMNKKVAVFTGTRAEYGLLFWLLKDIQNDPELQLQLLVSGM FT HLSPEFGETYKQIETDGFVIDEKIEILLSSDSAVGTAKSMGLGVLGFADSLSRLQPDVL FT VILGDRFEALAAAQTAMIMRIPIVHLHGGEITEGAYDDAIRHAITKLSYLHGTSTEDYR FT QRVIQLGEDPSRVQNVGAIGLDHLKRATFMTVAELSESLDFTLDKPFFLVTYHPVTLGN FT EAPEESFQALLNALDEYPDHQVILTYPNADDGGRRIIPILEEYARSNPTRVLAIPSLGQ FT VRYLSSVMHATAVIGNSSSGIIEVPAFDVPTVNIGSRQKGRLAAKSVLNVEPNQQSISD FT AIQVAIDRTYKLADEKIHNPYGQGDTSGKVIEMIKSLQFTPSKAFYDITINDVE" FT CDS 300206..301279 FT /transl_table=11 FT /locus_tag="VSAL_I0254" FT /old_locus_tag="TVS0075" FT /product="N-acetylneuraminic acid synthase" FT /note="Similar to Campylobacter coli PtmC UniProt:Q7X523 FT (334 aa) fasta scores: E()=4.5e-31, 52.113% id in 355 aa" FT /db_xref="GOA:B6EPC6" FT /db_xref="InterPro:IPR006190" FT /db_xref="InterPro:IPR013132" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR013974" FT /db_xref="InterPro:IPR020007" FT /db_xref="UniProtKB/TrEMBL:B6EPC6" FT /inference="similar to sequence:UniProt:Q7X523" FT /protein_id="CAQ77939.1" FT /translation="MTLIIAEAGVNHNGDENLAFQLVDAAYHAGADIVKFQTFKAKNLV FT TEDAVQAEYQVTNTQKQESQLAMLSRLELSYDIHHQLVKHCESLGIEFLSTAFDSESLD FT FLVNDLGLTRLKIPSGEITNAPLVLEHARTGCDLIVSTGMATLSEIEAVLGVIAFGYVA FT DKTEEPSELAFQQAYASEQGQKALKKKVTILHCTTEYPAPMVEINLKAMDTLGRAFELP FT AGYSDHSAGITIPIAAVARGAVLIEKHFTLDQNMEGPDHKASLEPQELTAMVSAIRQVE FT VALGVGVKSPTVSEVKNKAVARKSLVAAKAIQQGDLITEDNLTIKRPGSGMSPYHYWAL FT LNQPASQDYKAGDLIVE" FT CDS 301272..301916 FT /transl_table=11 FT /locus_tag="VSAL_I0255" FT /old_locus_tag="TVS0076" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6EPC5" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR018357" FT /db_xref="InterPro:IPR020019" FT /db_xref="UniProtKB/TrEMBL:B6EPC5" FT /protein_id="CAQ77940.1" FT /translation="MSKTELKPLVVIGGGGHASVLVDILRSQQREILAIVSPEDISQRR FT VFSGLTHLKNDDDVLGFSPDSVYLVNGVGMLPKSGLKRKLNEYFISLGYSFETVISDSA FT QVSSFAEIEQGAQIFSGAIIQAGVVIGAHSIINSGVIIEHDCMIGQYNHIAPKAILCGQ FT VTTHQYVYIGANATVIQNITLEQSSIVGAGAIVTKNISSEQICYPSRSVLK" FT CDS 301932..302990 FT /transl_table=11 FT /locus_tag="VSAL_I0256" FT /old_locus_tag="TVS0077" FT /product="nucleotidyl transferase" FT /note="Similar to Campylobacter coli PtmE UniProt:Q7X521 FT (220 aa) fasta scores: E()=5.9e-31, 43.439% id in 221 aa" FT /db_xref="GOA:B6EPC4" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:B6EPC4" FT /inference="similar to sequence:UniProt:Q7X521" FT /protein_id="CAQ77941.1" FT /translation="MSYSWKKVLIKPESTIVDALRVIDNESLRIALVVNDEQQLLGVVT FT DGDIRRSILNNLPLDTLVVDIMSCSPITASVNTAKEQLVKLMESEGILAIPLMEENKVV FT GLETLHHLFEEKTYHNPVFIMAGGFGTRLRPLTDSCPKPMLKIGNKPILETVIRSFIKA FT GFVNFYISTHYMPEQIQQHFGDGSDLGVKISYVHEDFPLGTGGALGLLPDDLPKDLPLI FT MMNGDVLTKVDFERLLDFHTENEADATMCVREYDYQIPYGVINGEGNKITSMVEKPIQR FT FFVNAGIYVVSPRVIQSVPENHHIDMPTLLEQHMNERDNILMFPIHEYWLDIGRMDDFN FT RAQADIHTLGVL" FT CDS join(302990..303124,303128..303685) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0257" FT /old_locus_tag="TVS0078" FT /product="putative acylneuraminate cytidylyltransferase FT (pseudogene)" FT /note="Similar to Escherichia coli NnaC UniProt:Q93NQ1 (421 FT aa) fasta scores: E()=3.8e-21, 42.130% id in 216 aa. CDS FT contains a nonsense mutation (TAG) after codon 45. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ77942.1" FT /inference="similar to sequence:UniProt:Q93NQ1" FT CDS 303682..304785 FT /transl_table=11 FT /locus_tag="VSAL_I0258" FT /old_locus_tag="TVS0080" FT /product="putative outer membrane protein" FT /note="Similar to Campylobacter jejuni PseA UniProt:Q939J7 FT (378 aa) fasta scores: E()=3.7e-39, 36.216% id in 370 aa" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR020022" FT /db_xref="UniProtKB/TrEMBL:B6EPC2" FT /inference="similar to sequence:UniProt:Q939J7" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ77943.1" FT /translation="MKYCSKCVMPDTRPGIAFDENGICTPCLNHEKKKNIDWDSRYKEL FT EKLCEKYRGINGEGQYDCMIAVSGGKDSHYQVYFMKEVMKMNPLLVSVEDNFPMTDAGK FT HNIRNISEEFGCDIISLKPNIKVQKHLMRKTFERYGKPTWFIDRLIYTYPLMMAEKFNT FT ALLVYGENVSFEYGGADAVETYSARNIIDNGVASDIPFEDLIDDNIQDNDLVLCHAPTK FT SQLDRIDPMYLGYFIPWDSFTNYNFATKRGFKDLTHEWDRTHHVENFDQVDSRAYLVHP FT WLKYPKFGHASATDYAARMVRYGMLTRKEAVELVKAKDAKLDPKCIEDFCNFLGYSNRQ FT FWDVVDGLYNTELFNKDNNGEWVLKSI" FT repeat_region 304942..305995 FT /note="VSa7" FT repeat_region 304942..304971 FT /note="IR of VSa7" FT CDS 305038..305994 FT /transl_table=11 FT /locus_tag="VSAL_I0259" FT /old_locus_tag="TVSa0178" FT /product="transposase" FT /db_xref="GOA:B6EKX7" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:B6EKX7" FT /protein_id="CAQ77944.1" FT /translation="MGYQYKQLTLGERYQIEAWNTHSISAREIGQKLKRSNGSISKELR FT RCPAGSYSAEQAHKHAFQKRTLSIKHTKCSQKNKKIIHLYLQLGWSPEQISGRMRREKI FT ENTICCSTIYNAIKREQWQRMLARKGKKYKQRKGVEAGARLIPNRIDISQRPAIVDDKS FT EVGHWEGDTVYGQDGYLVTMVERVSKLLVTCKVRNKSKKAVTRGINRMMKPFKELCKTI FT TFDNGGEFAGHAKIAKHLNCDIYFAKPYHSWQRGLNENTNGLLRRFFPKGMAIGELTAK FT EIKQAEFLINSRPRKTLNFLSPSEFLNGKSVSVIVTI" FT repeat_region 305966..305995 FT /note="IR of VSa7" FT CDS complement(306147..307148) FT /transl_table=11 FT /locus_tag="VSAL_I0260" FT /old_locus_tag="TVS0082" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR012477" FT /db_xref="UniProtKB/TrEMBL:B6EPC0" FT /protein_id="CAQ77945.1" FT /translation="MNVFLVTSPFQYICANEARCHYATNDNILLLVKQDMEPAISQMTK FT IVNENDWTHVINIERSQRTFSMPKAIKAVNKIRTNSSIKHFFHGEYNGWRTKFLLRNLK FT PDTEIYFDDGSLTLGEYERFIKTEHTFYRPRFVNDLIIKMQGLKPIGRLPISKKLEIFT FT IFDIKDPTVPVVKNDFSNMRETYNLNDDHQREHSNEYALFLGQGSIDCHGTIKSFYLDA FT IKRFAKTTGKKILYAPHRTETSDIRKEILKIENLTYHDSTLPIELEIAEKQLNINNIGG FT IASTALYTLKIIYPHIKIYSAKQSKEEYHTQVTYTDNELMLELLKSIGIELF" FT CDS complement(307195..308457) FT /transl_table=11 FT /locus_tag="VSAL_I0261" FT /old_locus_tag="TVS0083" FT /product="3-deoxy-D-manno-octulosonic-acid transferase" FT /EC_number="2.-.-.-" FT /db_xref="GOA:B6EPB9" FT /db_xref="InterPro:IPR001296" FT /db_xref="InterPro:IPR007507" FT /db_xref="UniProtKB/TrEMBL:B6EPB9" FT /protein_id="CAQ77946.1" FT /translation="MLIRLVYTLLLTLLSPVLLFGLYKKKPNKPQFGDRWKEHFGFTPT FT LKKSEQPLWIHAVSVGEAIAATPLIKALKQQSPEQPILVTTTTSTGAEQIAKLGDLVEH FT RYMPIDFPFAVNGFLKTVNPSKLLIIETELWPNTLHSVGKSNIPIYVVNARLSEKSCQG FT YTKIQPVFTELSKHLTKVLCQTQADADRFARLGINKERLCATGSIKFDIQISDEIKQQG FT QELRQLLDNDRPIWIAASTHKGEDEQVLDAHKEVLKEHPNALLILVPRHPERFDTVFEL FT SKNSGFSSIRRTSNKTVTAETQVYLGDTMGEMLVLIGAADVCFMGGSLLGDKVGGHNVL FT EPAALGVPVIIGPSYYNFKEIVDTLRGEQGIVICEPTQLSNHIVKLIDDSTEYQLLQNS FT ASNVVQSNQGALNRTIAISNI" FT CDS complement(308451..309521) FT /transl_table=11 FT /locus_tag="VSAL_I0262" FT /old_locus_tag="TVS0084" FT /product="ADP-heptose-LPS heptosyltransferase II" FT /EC_number="2.-.-.-" FT /db_xref="GOA:B6EPB8" FT /db_xref="InterPro:IPR002201" FT /db_xref="InterPro:IPR011910" FT /db_xref="UniProtKB/TrEMBL:B6EPB8" FT /protein_id="CAQ77947.1" FT /translation="MKILIIGPSWVGDMVMSQSLYITLKQQNPDAVIDVMAPAWCKPIL FT ERMPEVNQAIEMPLGHGAFDLFGRRRLSKQLSANNYTHAYICPNSAKSALIPWFAGIPI FT RTGWKGEMRYGLLNDLRSNKKSFQYMVERYVALAHPKSEMINSSSLGGLDTLPRPKLAI FT DADTQQAMLTKFSLSADKPVLGLCPGAEFGPAKQWPVEHYAAVANEMINQGYQVWLFGS FT AKDKETTEAIKSLVHSDNQASVFNLAGDTSLIEAVDLLAACKTVVSNDSGLMHVAAAVG FT CHVVGVYGSTSPKYTPPLAEKVDIVSTDIECRPCFKRECEFKHLKCLTDLDPQLVLDKI FT SPKSHSNESVIQVTSC" FT CDS complement(309518..310744) FT /transl_table=11 FT /locus_tag="VSAL_I0263" FT /old_locus_tag="TVSa0182" FT /product="O-antigen ligase WaaL" FT /note="Similar to Vibrio cholerae Putative O-antigen ligase FT WaaL UniProt:Q8RJ54 (399 aa) fasta scores: E()=7e-14, FT 27.094% id in 406 aa" FT /db_xref="GOA:B6EPB7" FT /db_xref="InterPro:IPR007016" FT /db_xref="UniProtKB/TrEMBL:B6EPB7" FT /inference="similar to sequence:UniProt:Q8RJ54" FT /protein_id="CAQ77948.1" FT /translation="MKKISLPLIATILCFLFFSTPIIYPDSYVVAPLLLALFGLFLLPK FT TYHAFKNRDVKYISLSMVGYFILTIISFLYSGGETSQLDMPSRTVLASFILCFLVTYKP FT NPAPLFLAAPIGAAIAGFISFYHSFYIGGCAFVGTFGYMPIQIGGIIASLATFSVISFF FT YYRKTEQKNFAVFSFVAANLGYIATLLSGARGAWLLTPFVLLIVLYLNKELINKKIVGY FT ALLAAIIDLSIASAQITSRLDAIQSDLTQYSAEQSASSSGARLEMWKSALYSAQESPLF FT GQGFSGIEAAKQRQLDAGLIDPIALKYSRAHNQYLEDLQTKGIFGLSVLLIMFAVPFAF FT FKRNLKQYINDSDKDTHYFLALMGASHVALVAGYALTQHYLSHHSGILFFAVGIAILSA FT LVINQRKPS" FT CDS complement(310915..311856) FT /transl_table=11 FT /gene="hldD" FT /locus_tag="VSAL_I0264" FT /old_locus_tag="TVS0086" FT /product="ADP-L-glycero-D-manno-heptose-6-epimerase" FT /EC_number="5.1.3.20" FT /db_xref="GOA:B6EPB6" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR011912" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPB6" FT /protein_id="CAQ77949.1" FT /translation="MIIVTGGAGMIGSNIIKSLNDNGFNDILVVDNLKDGKKFKNLVDL FT DITDYMDKEDFITQIMAGDDFGTIDAIFHEGACSATTEWDGKYMMMNNYEYSKEVLHFC FT IEREIPFLYASSAATYGDTDTFIEEREYEGALNVYGYSKQQFDNYVRRLWADAEAHGET FT VSQITGFRYFNVYGPREQHKGSMASVAFHLNNQMNASEDPKLFERSDEFKRDFVYVGDV FT AAVNLWFLENGVSGIFNCGTGRAEPFRAVADAVIKHHGKGEVQSIPFPEHLKGAYQEFT FT QADLTKLRAAGCDVEFKSVADGVAEYMAIVNK" FT misc_feature complement(311044..311850) FT /gene="hldD" FT /locus_tag="VSAL_I0264" FT /note="HMMPfam hit to PF01073, 3-beta hydroxysteroid FT dehydrogenase/isomera, score 3.9e-06" FT /inference="protein motif:HMMPfam:PF01073" FT misc_feature complement(311134..311853) FT /gene="hldD" FT /locus_tag="VSAL_I0264" FT /note="HMMPfam hit to PF01370, NAD dependent FT epimerase/dehydratase family, score 9.3e-45" FT /inference="protein motif:HMMPfam:PF01370" FT CDS 312237..313691 FT /transl_table=11 FT /locus_tag="VSAL_I0265" FT /old_locus_tag="TVS0087" FT /product="putative metallo-beta-lactamase" FT /db_xref="GOA:B6EPH0" FT /db_xref="InterPro:IPR001279" FT /db_xref="InterPro:IPR011108" FT /db_xref="InterPro:IPR022712" FT /db_xref="UniProtKB/TrEMBL:B6EPH0" FT /protein_id="CAQ77950.1" FT /translation="MPTPQKHSTQSTNFEINLKHHGGKLGVTGSCHELCINSNGNKHGI FT LIDCGLFQGKDAKDKHGNDKKLDIEFPISHLKALILTHTHIDHIGRLPWLLTKGFKQPI FT YCTPATAELVPLMLDDGLKLQLGLNKGQRERVLELIRKQIKPIPYNQWHRIKLTSTMVP FT SHSKSSCSSLKAKRPESLNLLLRFQPAGHILGSAYVEIKLPNDEIVVFSGDLGPSNTPL FT LPDPISPKRADLLVIESTYGNKLHDSVETRAKRLQEIIERSLQDGGAIIIPAFSVGRTQ FT ELLFDIEHLIHHNKIDSKIPIILDSPLANKVTKQYRRFKKLWSKEAKTKLNNQRHPLNF FT EQCITIESHKEHMQIVNRLKSTAKPCIIVAASGMCAGGRVMNYLEALLPDKRTDIILAG FT YQAHGTLGRDLQNQRSTVWIDNQPVDVNAQIHTMSGYSAHADQADLIKFVDGIEEGRKE FT VVVVHGEDNVREEFERVLEARNYTLR" FT misc_feature 312318..313061 FT /locus_tag="VSAL_I0265" FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily, score 1.7e-18" FT /inference="protein motif:HMMPfam:PF00753" FT misc_feature 313500..313637 FT /locus_tag="VSAL_I0265" FT /note="HMMPfam hit to PF07521, RNA-metabolising FT metallo-beta-lactamase, score 8.6e-15" FT /inference="protein motif:HMMPfam:PF07521" FT CDS 313868..314215 FT /transl_table=11 FT /locus_tag="VSAL_I0266" FT /old_locus_tag="TVS0088" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR008815" FT /db_xref="InterPro:IPR023377" FT /db_xref="UniProtKB/TrEMBL:B6EPH1" FT /protein_id="CAQ77951.1" FT /translation="MLFEKLKIWQRSARLACDVIELFEGNRNFALKDQILRSSLSVPSN FT ISEGEERETLKEKIRFYYYAKGSCGELLTQLLIAIETSSVPKEPALILVKETREIAKVI FT ATIIQKDKRKK" FT CDS 314332..314976 FT /transl_table=11 FT /locus_tag="VSAL_I0267" FT /old_locus_tag="TVS0089" FT /product="HTH-type transcriptional regulator, tetR-family" FT /db_xref="GOA:B6EPH2" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR015893" FT /db_xref="InterPro:IPR023773" FT /db_xref="UniProtKB/TrEMBL:B6EPH2" FT /protein_id="CAQ77952.1" FT /translation="MKTKDRIILGALTLFNQNGERNITTNHISAHLEISPGNLYYHFGN FT KEAIINSIFDNYANELKTRFKPMAEEDQSTMPSVQIMLSYLDSIFELMWNYRFFYANLP FT DILSRDTELKEKYTKAQESLNDNLISIMKGFRTSGLIALEDDELLALTKTLHLVSSCWI FT SYQTAQLSDKEITEAVVYQGMLQMLNVVRPIATEQGRAQILELEAHYQSRL" FT misc_feature 314350..314490 FT /locus_tag="VSAL_I0267" FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 2e-13" FT /inference="protein motif:HMMPfam:PF00440" FT misc_feature 314398..314463 FT /locus_tag="VSAL_I0267" FT /note="Predicted helix-turn-helix motif with score FT 1148.000, SD 3.10 at aa 23-44, sequence FT ITTNHISAHLEISPGNLYYHFG" FT misc_feature 314593..314622 FT /locus_tag="VSAL_I0267" FT /note="PS00904 Protein prenyltransferases alpha subunit FT repeat signature." FT /inference="protein motif:ProSite:PS00904" FT CDS 315135..316286 FT /transl_table=11 FT /locus_tag="VSAL_I0268" FT /old_locus_tag="TVS0090" FT /product="putative exported protein" FT /db_xref="GOA:B6EPH3" FT /db_xref="InterPro:IPR000184" FT /db_xref="UniProtKB/TrEMBL:B6EPH3" FT /protein_id="CAQ77953.1" FT /translation="MKRIILSTILFISNPLTAAIEPLFDTPKDMEPTWVDNLLDVFGAD FT GGFDESKVIDMSYLPTAYYTPEKKFGVGLLMVGLYKTENAAVEEQPSSLVVNSFVSMNK FT SYGVSVENMSFFNQGKQRLLLELELHNEAAVYYGKGIEQGNKDSNYHEFDEQVYSFKPR FT WMTEVANNYFIGIGADLTYAKAENLELVTTGRSYQSDRYLPDNLSSGVIITSVYDSRDY FT RLNAKKGWLLQFDAGLYHNDKADSFSTYDLEVANYIDLNGLPGLIAWQIQGHFTQGEAP FT WNIMPDLGGSSAMRGYIKGRYRDDQMMMGQVEYRLPIFQRYGMVFWGAVGSVAPSVSEL FT SDELMTSYGTGFRFKVKDNINLRADVGIGQNETNFYLNVNEVF" FT sig_peptide 315135..315188 FT /locus_tag="VSAL_I0268" FT CDS 316286..317005 FT /transl_table=11 FT /locus_tag="VSAL_I0269" FT /old_locus_tag="TVS0091" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:B6EPH4" FT /protein_id="CAQ77954.1" FT /translation="MGFRLICLTLAMSASVQSVMANEQVREASCSVASSYGIYLSGIHT FT GEMKRVEAWQGTRAIITSNSKASILGIGTAYSQSAEVSWSELENEWVTDKFHQKVSGFR FT SRDMKVTFTDGGHQSDVDIDGKESTYFSKEIPLRDVDTLSIQIRENLLQGKQTFRLNRQ FT ASDGIEPYQYQVHEKQIKTFEKWGELEVIPVEQTGAEHVTFLFAPELEYQLIEARYHGF FT ILRGLLTLEGYESTCGG" FT sig_peptide 316286..316348 FT /locus_tag="VSAL_I0269" FT CDS 317174..317698 FT /transl_table=11 FT /locus_tag="VSAL_I0270" FT /old_locus_tag="TVS0092" FT /product="putative lipoprotein" FT /db_xref="UniProtKB/TrEMBL:B6EPH5" FT /protein_id="CAQ77955.1" FT /translation="MNKMIPIGLFSTLLLTACGGSDSGGGSGGGTPAPTKYTWQFVQMK FT ANTQKNMLSSCAGKAPTEFYVDTNDIDESKWVYTFAVQAPNITDILVYDANSVLYTDTN FT LSKFDINPTTATLTFSENDIPDGGYVTIVDSIKDGSKHLLTVQKELLSDALIKVNVEQG FT TQKCYAENKFS" FT sig_peptide 317174..317248 FT /locus_tag="VSAL_I0270" FT misc_feature 317195..317227 FT /locus_tag="VSAL_I0270" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 317676..318617 FT /transl_table=11 FT /locus_tag="VSAL_I0271" FT /old_locus_tag="TVS0093" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EPH6" FT /protein_id="CAQ77956.1" FT /translation="MQRINLVKNSKNKKVIIGTFDGVAESSVEGFLTGQSQKGSGTTKT FT EIETLNNEYVLLSGFNADNQITGFNYQASSALSDMTSTSTASHALDALTSFINIDLRDS FT SDFSFLDMTIFSNYKGQVFTWNSWATKPSIFTSYAKLGDEFNYSATYKGTLNSWKITVN FT STASATGDISIVLDSLDMQTIPAPAFECGGSTCYVNVKTLTSLDVDTIKLEYTAGVTRH FT TIYTNDRDMFIPEIPSYIEDVTYPDSLTPVNVSFLMGDNITNEARSGFMSYSNIKENPP FT RDGYIDMLIAPGLEMKHQLGVKQSNFISVVSP" FT CDS complement(318954..321161) FT /transl_table=11 FT /locus_tag="VSAL_I0272" FT /old_locus_tag="TVS0094" FT /product="putative outer membrane protein" FT /db_xref="InterPro:IPR010344" FT /db_xref="UniProtKB/TrEMBL:B6EPH7" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ77957.1" FT /translation="MPYPKFALSLIASAITATFSTFSLAAESSEYIEPITFTPSQTDFG FT GVGLMQMPSGRNAEEGTFSFNTSFNNEYHFYNLSLQLMPWLETTIRYTLTQDMKYSSDP FT SFSGDTTHADKGIDFKVRLLEESDWLPETSIGVRDFGGTGLFDGEFVAATKRFGNLDVT FT VGMGWGYLGQSGNITNPFCKASDKYCSRESDFKGNGGSVDFERWFKGSASLYGGLEYQT FT PFQPLRLKLEYDGNDYSQDYPVKGGVADMTQHTPWNFGVLYGLGDWGDMRLSYERGDTL FT TFGFTLTTNFNTMKANWRDTPETVYQAPSVNHVDEINWNYIEQELDNNAGYSNSKFYVK FT GNELTIVTGQEKYRNKDIAHQEAAAILASNTPEYIQTYRIIEENNSLLTTETVIDAERY FT KDAAQFNYVGAKITDATVTQDISETDSINDDNLKHDSFDRWDVNISPSLRQSIGGAEGF FT YLYEIGIKAGSSYWLTDNLQASGSLYLNLIDNYDKFNYIAPPDATEVPRVRTMFRAYAT FT ESALRLERLQLTWFDEYAEGLYGQTYGGYLESMFGGVGTEILYRPINSRWAVGLDYTYI FT QQRSPDNWFDFYQDDRQYSEADGRYYNVRSQGTTGHLTGYYMPQWSFLKSTLLKVSYGE FT FLAGDKGYRVDFSKQFDSGVIVGAYASMTDLSAEEFGEGSYTKGFYLSIPYDIMTVKPS FT KNRAYFDWQPLTRDGGQMLSKENTLFGLTDARQPWYTKKGL" FT misc_feature complement(318969..321143) FT /locus_tag="VSAL_I0272" FT /note="HMMPfam hit to PF06082, Bacterial putative FT lipoprotein (DUF940), score 0" FT /inference="protein motif:HMMPfam:PF06082" FT sig_peptide complement(321087..321161) FT /locus_tag="VSAL_I0272" FT CDS complement(321164..321928) FT /transl_table=11 FT /locus_tag="VSAL_I0273" FT /old_locus_tag="TVS0095" FT /product="exported protein" FT /db_xref="InterPro:IPR010425" FT /db_xref="UniProtKB/TrEMBL:B6EPH8" FT /protein_id="CAQ77958.1" FT /translation="MTMRIFGFLFLSLCSFFSYASDSALSITLVKNSVILSFPQATRLD FT SALLESLNYSNIYAYPLGLILSDDEKKNTVIQQQEKLSQQLSKLGEYSPFLSWTESTYQ FT LNSSLLINQLAQLSFVSRLFIPLDIDEIRIKKENNPLLSGQFSLFVPERPTTITVLGLT FT LSPKPQTLSYIENGSVKDYLHNVDVSSQANTSQVYVIQPDGVVQIASNNQWQKNTVSIA FT PGATIFIGFNELPDSLSSIHQDIIQLLRNKVN" FT misc_feature complement(321170..321916) FT /locus_tag="VSAL_I0273" FT /note="HMMPfam hit to PF06251, Protein of unknown function FT (DUF1017), score 4.9e-33" FT /inference="protein motif:HMMPfam:PF06251" FT misc_feature complement(321401..321466) FT /locus_tag="VSAL_I0273" FT /note="Predicted helix-turn-helix motif with score FT 1038.000, SD 2.72 at aa 155-176, sequence FT TTITVLGLTLSPKPQTLSYIEN" FT sig_peptide complement(321869..321928) FT /locus_tag="VSAL_I0273" FT CDS complement(321935..322600) FT /transl_table=11 FT /locus_tag="VSAL_I0274" FT /old_locus_tag="TVS0096" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR021308" FT /db_xref="InterPro:IPR023373" FT /db_xref="UniProtKB/TrEMBL:B6EPH9" FT /protein_id="CAQ77959.1" FT /translation="MKNITLYLLTFGCFLLTGCSQKIQDVQSTFNEAVFGMSDVELSAE FT HINELPYASAFVKINDSHNIFMVLALAESNPTTGVTQLKWLSSDNVMIVTENGRIIKTL FT ALPNYNLIALNSVALPKLSQQLTAPQQWQAVYDWMPDYRYHYQASIHALPGEKSTLTSL FT VWTKEVTAIQELVSFSALDLTFTNQYWLDNTGEVVKTRQFIGPNMATIEMTFLKPFRS" FT sig_peptide complement(322529..322600) FT /locus_tag="VSAL_I0274" FT misc_feature complement(322562..322594) FT /locus_tag="VSAL_I0274" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(322685..322942) FT /transl_table=11 FT /locus_tag="VSAL_I0275" FT /old_locus_tag="TVS0097" FT /product="membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EPI0" FT /protein_id="CAQ77960.1" FT /translation="MKKTAIALMLAMTAGSAFAAAEATTAAASTGSAAGTAAGTARATT FT AAVGVAGTTAIAVGAVVAVAVAVADSGSDTATSTSTSVTQ" FT misc_feature complement(order(322736..322804,322862..322930)) FT /locus_tag="VSAL_I0275" FT sig_peptide complement(322886..322942) FT /locus_tag="VSAL_I0275" FT CDS 323139..324506 FT /transl_table=11 FT /locus_tag="VSAL_I0276" FT /old_locus_tag="TVS0098" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EPI1" FT /protein_id="CAQ77961.1" FT /translation="MILKNRFGKYLIMHTVMANYTNKKRSLTPIAAALACCYSAITFMA FT TPAMASPWLEANDPFLRSSLQVLSDSGVISSPTNQYPLRWSLFGDDIINNDTSHDLSVT FT LAQREVRYSMNSAKLNRGQSSAKFVASNEEAPSTGFGQFSKDKWGASASYEYLDTSYAF FT RVTTSYSNYQGEEEIRWDDSYLSLNLGAWLFSIGTVDRWWGQGWQHNLILGSYAKADPD FT ISASYIGKNRVLGVWNIETVVAKPDDAEFNYHSATRLVSKPFSFFEYGLTYQVWFDSNN FT SSDSDDSIKQAAVDAKLTLPSINVSNDSAEEQTHVYHSVYAELASTENTTELGALLLGW FT SGSVNIEGQTVRLVLESQQSTSENEASFNANSSYAVDNSYSVALYVQMSNDHNVSLSYQ FT QSEWDDTQSSQSKTTQANYRLPAASGMVHLGLGYTQMKTTTDDDQINASLGYEFRF" FT sig_peptide 323139..323288 FT /locus_tag="VSAL_I0276" FT misc_feature 323217..323285 FT /locus_tag="VSAL_I0276" FT CDS 324575..327184 FT /transl_table=11 FT /locus_tag="VSAL_I0277" FT /old_locus_tag="TVS0099" FT /product="periplasmic protein involved in polysaccharide FT export" FT /db_xref="GOA:B6EPI2" FT /db_xref="InterPro:IPR003715" FT /db_xref="InterPro:IPR010425" FT /db_xref="InterPro:IPR019554" FT /db_xref="UniProtKB/TrEMBL:B6EPI2" FT /protein_id="CAQ77962.1" FT /translation="MMMKRTLTASLFAMISTSTMAFTPSAEQMAQFQKLPKSQQEQLAR FT QYGVDVSVLTGSASPVHRAKGKTEQQPVRASAPIVPSVADKSERFSAFGYDMFLGKVKT FT LTSVDNLPVPNDYVMAPGDEVAIQIYGKSSEELNLVIDRQGRLNFPEFGPVAVSGQTFA FT DMQKHLTGIIKQKMLGVDVLVSMGAMRTMQVYVVGEATQPGAYNVNGLTTVTQALIASG FT GIKESGSLRYVELKRKGRVVERFDVYDLLLKGDSRSDVRLLSGDTLYIPTKNSSVELHG FT AVKRPAIYELKGKTTLSRLLSFGGGLQPNAFLSKINITRMGSNGYEQFTVDMSTSKGKN FT FIIKNGDKVVISKAAESLNNAVALRGEVARQGAYNFKQGMKVSDIVSSVRTDLKQNADL FT NYALIVREINKQRDIEVLQFNLGEAIANPSSKENLSLKESDQIFVFNSGLDLDYWFKSY FT ADAEVKVKHSEQKKNVERVDVETGAIIETQSVTTLKTEDIDTVSRGEQQIQKSREKLLT FT PIIDRLKSQATLDNPARLIEVSGAVKYPGVYPLSRIGTIKQIILAAGGLTEEAYLDSAE FT WTVRDVNGSELIIEQKKISLRDALSVEGEKNFTLTGQDRLIVKTKPNWQEGYTIELQGE FT VMFPGAYSFTRGETLQEVIERAGGLTEYAYADGSVFSRERLKRLEEERLKILNMQLKQE FT IGNLALRRQNSSAQYTTPPGDAMLIADELAKTEAMGRMVISIPRAIEGDEIANLMLEKG FT DKLYIPARNPVISIMGEVQFASNQLFEPNMTVEEYIEVAGGTKKQADTDRIYVVRADGS FT VMVPNNSYWFSRSDKPLAPGDTIIVPLDTDYLDGLSTLTSATQILYQIGVAWSAIKD" FT sig_peptide 324575..324637 FT /locus_tag="VSAL_I0277" FT misc_feature 324890..325249 FT /locus_tag="VSAL_I0277" FT /note="HMMPfam hit to PF02563, Polysaccharide FT biosynthesis/export protei, score 3.8e-20" FT /inference="protein motif:HMMPfam:PF02563" FT misc_feature 324950..324973 FT /locus_tag="VSAL_I0277" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 327417..328394 FT /transl_table=11 FT /gene="wzz" FT /locus_tag="VSAL_I0278" FT /old_locus_tag="TVS0100" FT /product="O-antigen length determinant protein" FT /db_xref="GOA:B6EPI3" FT /db_xref="InterPro:IPR003856" FT /db_xref="UniProtKB/TrEMBL:B6EPI3" FT /protein_id="CAQ77963.1" FT /translation="MNEKQQLPHSQHLAFPPAMPADDEIDLRELFGALWKGKWIIIATT FT FIFAVGGVLFALSQPNTYKAEVVLAPAGESGGGLAVMAGELGGLASLAGINIGGGGTDS FT KGMSLAVLQSRQFINAFITKHDLVVPLFAGTEWNKQSGELIIDPEVYNTETKEWVREVK FT PDESPVPTDWQAHKAFKGFLSTADAKDTGLVTLSVTHISPIIAQQWVEWLVADLNLWMK FT DKSLTETKRNIGYLEQQLQKTDISDMRSVFYQLIEDQTKNLMLAEVEAEFAFKTIDPAV FT IPEEKAGPKRALICVLSVLLGGMLGVAVVLVRFAFRKEELETRN" FT misc_feature 327483..328064 FT /gene="wzz" FT /locus_tag="VSAL_I0278" FT /note="HMMPfam hit to PF02706, Chain length determinant FT protein, score 1.3e-23" FT /inference="protein motif:HMMPfam:PF02706" FT misc_feature order(327531..327590,328296..328364) FT /gene="wzz" FT /locus_tag="VSAL_I0278" FT repeat_region 328703..330982 FT /note="VSa2" FT repeat_region 328703..328726 FT /note="IR of VSa2" FT CDS 328784..329098 FT /transl_table=11 FT /locus_tag="VSAL_I0279" FT /old_locus_tag="TVS0101" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77964.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 329095..329442 FT /transl_table=11 FT /locus_tag="VSAL_I0280" FT /old_locus_tag="TVSb0146" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ77965.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS join(329514..329732,329731..330966) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0281" FT /old_locus_tag="TVS0104" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=1.2e-119, 56.998% id in 493 aa. Contains FT a 31 nucleotide deletion after codon 73" FT /db_xref="PSEUDO:CAQ77966.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT CDS complement(331420..331788) FT /transl_table=11 FT /locus_tag="VSAL_I0282" FT /old_locus_tag="TVS0105" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR007569" FT /db_xref="InterPro:IPR011335" FT /db_xref="UniProtKB/TrEMBL:B6EPI7" FT /protein_id="CAQ77967.1" FT /translation="MTLIYNKSKHKTLRQKLRSEVPTAERVLWNKLRRNQLNVKFRRQY FT GIGRYVCDFYNAEYKLVIELDGDSHFTPEAENYDAIRNEYMRNLGMSVLRFTNQDIMNN FT INGVIEFILIHIDQLKSE" FT misc_feature complement(331438..331767) FT /locus_tag="VSAL_I0282" FT /note="HMMPfam hit to PF04480, Protein of unknown function FT (DUF559), score 1.2e-35" FT /inference="protein motif:HMMPfam:PF04480" FT CDS complement(332081..332851) FT /transl_table=11 FT /gene="tpiA" FT /locus_tag="VSAL_I0283" FT /old_locus_tag="TVS0106" FT /product="triosephosphate isomerase" FT /EC_number="5.3.1.1" FT /db_xref="GOA:B6EPI8" FT /db_xref="InterPro:IPR000652" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR020861" FT /db_xref="InterPro:IPR022896" FT /db_xref="UniProtKB/Swiss-Prot:B6EPI8" FT /protein_id="CAQ77968.1" FT /translation="MRHPVVMGNWKLNGSKEMVVDLLNGLNAELEGVTGVDVAVAPPAL FT FIDLAERTLTEAGSAIILGAQNSDLNNSGAFTGDMSPAMLKEFGATHIIIGHSERREYH FT NESDEFVAKKFAFLKENGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEALEG FT AIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHIAEKSEEVAKNVVIQYGGSVKPENAEA FT YFAQPDIDGALVGGAALDAKSFAAIAKAAAKAKA" FT misc_feature complement(332108..332842) FT /gene="tpiA" FT /locus_tag="VSAL_I0283" FT /note="HMMPfam hit to PF00121, Triosephosphate FT isomerase,score 1e-122" FT /inference="protein motif:HMMPfam:PF00121" FT misc_feature complement(332321..332353) FT /gene="tpiA" FT /locus_tag="VSAL_I0283" FT /note="PS00171 Triosephosphate isomerase active site." FT /inference="protein motif:ProSite:PS00171" FT CDS 333134..333484 FT /transl_table=11 FT /gene="hpcD" FT /locus_tag="VSAL_I0284" FT /old_locus_tag="TVS0107" FT /product="5-carboxymethyl-2-hydroxymuconate isomerase" FT /db_xref="GOA:B6EPL5" FT /db_xref="InterPro:IPR004220" FT /db_xref="InterPro:IPR014347" FT /db_xref="UniProtKB/TrEMBL:B6EPL5" FT /protein_id="CAQ77969.1" FT /translation="MMPHLVMEYSNSADERLNMQGLLEDLHQVAIESELFSVDDVKSRA FT IRVHSWLVGDKGNSVDFIHITIELLSGRTTEQKRELSRALMDVLAEQASHIDSLTINVR FT DMEKESFQKVGQ" FT misc_feature 333140..333466 FT /gene="hpcD" FT /locus_tag="VSAL_I0284" FT /note="HMMPfam hit to FT PF02962,5-carboxymethyl-2-hydroxymuconate isomerase, score FT 2.4e-05" FT /inference="protein motif:HMMPfam:PF02962" FT CDS complement(join(333518..333592,334600..334866)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0285" FT /old_locus_tag="TVS0109" FT /product="hypothetical protein (pseudogene)" FT /note="Similar to Vibrio fischeri Hypothetical protein FT UniProt:Q5E8E3 (117 aa) fasta scores: E()=1.4e-26, 83.333% FT id in 90 aa. CDS is disrupted by the insertion of an IS FT element after codon 107" FT /db_xref="PSEUDO:CAQ77970.1" FT /inference="similar to sequence:UniProt:Q5E8E3" FT repeat_region 333593..334597 FT /note="VSa6" FT repeat_region 333593..333611 FT /note="IR of VSa6" FT CDS 333689..334570 FT /transl_table=11 FT /locus_tag="VSAL_I0286" FT /old_locus_tag="TVS0108" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ77971.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 334016..334510 FT /locus_tag="VSAL_I0286" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 334579..334597 FT /note="IR of VSa6" FT CDS complement(335317..336324) FT /transl_table=11 FT /gene="glpX" FT /locus_tag="VSAL_I0287" FT /old_locus_tag="TVS0110" FT /product="fructose-1,6-bisphosphatase class II GlpX" FT /EC_number="3.1.3.11" FT /db_xref="GOA:B6EPL8" FT /db_xref="InterPro:IPR004464" FT /db_xref="UniProtKB/TrEMBL:B6EPL8" FT /protein_id="CAQ77972.1" FT /translation="MKRDLAMAFSRVTEGAALAGYKWLGRGDKNAADGAAVEVMRTLLN FT KTDISGEIVIGEGEIDDAPMLYIGETVGTGGDAVDIAVDPIEGTRMTAMGQSNALAVLA FT AGEKGSFLKAPDMYMEKLVVGPGAKGAIDLNLSLEENLENVAKALGKTLDTLVVTTLAK FT PRHDVMIAKMQKMGVRVFAVPDGDVAASILTCMPDSEVDVMYCIGGAPEGVISAAAIRA FT LDGDMQARLLPRHEVKGDTEENRAYGEEELKRCKEMGVEANVILKMTDMARSDDVVFAA FT TGITKGDLLEGITRQGNIATTETLLIRGRCRTIRRIKSIHYLERKDAEVRDFIL" FT misc_feature complement(335362..336321) FT /gene="glpX" FT /locus_tag="VSAL_I0287" FT /note="HMMPfam hit to PF03320, Bacterial FT fructose-1,6-bisphosphatase, gl, score 3.2e-213" FT /inference="protein motif:HMMPfam:PF03320" FT CDS 336692..336934 FT /transl_table=11 FT /locus_tag="VSAL_I0288" FT /old_locus_tag="TVS0111" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EPL9" FT /db_xref="InterPro:IPR009252" FT /db_xref="UniProtKB/Swiss-Prot:B6EPL9" FT /protein_id="CAQ77973.1" FT /translation="MSLEILEQLEAKVQMAVDTIALLQMEVEELKETNAELTQNLEQAN FT NGRSEVEQEAQKARDEQASFEARIRGLLGKMEEVE" FT misc_feature 336692..336928 FT /locus_tag="VSAL_I0288" FT /note="HMMPfam hit to PF06005, Protein of unknown function FT (DUF904), score 4.4e-28" FT /inference="protein motif:HMMPfam:PF06005" FT repeat_region 337139..339453 FT /note="VSa2" FT repeat_region 337139..337162 FT /note="IR of VSa2" FT CDS 337220..337534 FT /transl_table=11 FT /locus_tag="VSAL_I0289" FT /old_locus_tag="TVS0112" FT /product="putative transposase?" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ77974.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 337531..337878 FT /transl_table=11 FT /locus_tag="VSAL_I0290" FT /old_locus_tag="TVSb0147" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGS1" FT /protein_id="CAQ77975.1" FT /translation="MNVFTDISTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 337950..339437 FT /transl_table=11 FT /locus_tag="VSAL_I0291" FT /old_locus_tag="TVS0115" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EGR2" FT /protein_id="CAQ77976.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 339430..339453 FT /note="IR of VSa2" FT CDS complement(339695..340192) FT /transl_table=11 FT /gene="rraA" FT /locus_tag="VSAL_I0292" FT /old_locus_tag="TVS0116" FT /product="regulator of ribonuclease activity A" FT /db_xref="GOA:B6EPM3" FT /db_xref="InterPro:IPR005493" FT /db_xref="InterPro:IPR010203" FT /db_xref="InterPro:IPR014339" FT /db_xref="UniProtKB/TrEMBL:B6EPM3" FT /protein_id="CAQ77977.1" FT /translation="MEYNTSALCDIYLDQVDVVEPMFSHFGAKSSFSGQITTIKCFEDN FT GLISQLLDEKGEGRILLIDGGGSLRRALIDADLAAKAAHNGWEGLIVYGCVREVDYLEE FT IELGIQALASIPVGAAKKNVGEIDVAVNFGSVTFLPEDYLYADSTGIIISQEPLEEMGE FT EE" FT misc_feature complement(339734..340192) FT /gene="rraA" FT /locus_tag="VSAL_I0292" FT /note="HMMPfam hit to PF03737, Demethylmenaquinone FT methyltransferase, score 1.7e-77" FT /inference="protein motif:HMMPfam:PF03737" FT CDS complement(340286..341194) FT /transl_table=11 FT /gene="menA" FT /locus_tag="VSAL_I0293" FT /old_locus_tag="TVS0117" FT /product="1,4-dihydroxy-2-naphthoate octaprenyltransferase" FT /EC_number="2.5.1.-" FT /db_xref="GOA:B6EPM4" FT /db_xref="InterPro:IPR000537" FT /db_xref="InterPro:IPR004657" FT /db_xref="UniProtKB/TrEMBL:B6EPM4" FT /protein_id="CAQ77978.1" FT /translation="MKTSPFAIWLSAARPKTLPLALASIMTGSALAYWNNHASATITIM FT AFVTATLLQILSNLANDYGDAVKGTDNDERLGPQRAMQSGLVTQATMKKAIGINIVLTI FT ISGLILVFSSLHQTMDIIGFIILGLLAIGAAIAYTMGDKPYGYRGLGDISVFIFFGLLG FT VAGTYYLQTGHLSSSLLLPAIACGLLAVAVLNINNLRDIDNDAACGKMTLAVRMGPNWG FT RKYHAIIIAISFTCLALFSATQIHSLAGWLFLIPAPFVLNHVISVMRAPDGEAIRPMMG FT TVVQCALFTNIFFSLGLYLSI" FT misc_feature complement(340289..341143) FT /gene="menA" FT /locus_tag="VSAL_I0293" FT /note="HMMPfam hit to PF01040, UbiA prenyltransferase FT family, score 1.2e-30" FT /inference="protein motif:HMMPfam:PF01040" FT misc_feature complement(order(340295..340363,340391..340450, FT 340469..340522,340607..340666,340685..340738, FT 340781..340834,340853..340912,341030..341098)) FT /gene="menA" FT /locus_tag="VSAL_I0293" FT sig_peptide complement(341099..341194) FT /gene="menA" FT /locus_tag="VSAL_I0293" FT CDS complement(341282..342151) FT /transl_table=11 FT /gene="cfxP" FT /locus_tag="VSAL_I0294" FT /old_locus_tag="TVS0118" FT /product="phosphoribulokinase" FT /EC_number="2.7.1.19" FT /db_xref="GOA:B6EPM5" FT /db_xref="InterPro:IPR006082" FT /db_xref="InterPro:IPR006083" FT /db_xref="UniProtKB/TrEMBL:B6EPM5" FT /protein_id="CAQ77979.1" FT /translation="MSAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDIKASWLEGDSFH FT RFTRPEMDVEIRKAKEQGKHISYFGPQANDFPALEQFFHQYGIDGSGQYRRYLHTFDEA FT VPFNQMPGTFTPWQELPDNTDVLFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLEWIQ FT KFVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGI FT PSLDESFVVIRFRGIANVDFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIIRPLLQQ FT LIETGKIG" FT misc_feature complement(341510..342133) FT /gene="cfxP" FT /locus_tag="VSAL_I0294" FT /note="HMMPfam hit to PF00485, Phosphoribulokinase / FT Uridine kinase family, score 1.2e-101" FT /inference="protein motif:HMMPfam:PF00485" FT CDS complement(342253..342495) FT /transl_table=11 FT /locus_tag="VSAL_I0295" FT /old_locus_tag="TVS0119" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR010648" FT /db_xref="UniProtKB/Swiss-Prot:B6EPM6" FT /protein_id="CAQ77980.1" FT /translation="MIIPWQDIAPDTLENLISEFVLREGTDYGEMECSHQDKIEQVKLL FT LKNGDAMVVFSELHETVDIQTKARFNPNMTNHDFE" FT misc_feature complement(342286..342495) FT /locus_tag="VSAL_I0295" FT /note="HMMPfam hit to PF06794, Uncharacterised protein FT family (UPF0270), score 1.8e-38" FT /inference="protein motif:HMMPfam:PF06794" FT CDS complement(342530..343498) FT /transl_table=11 FT /locus_tag="VSAL_I0296" FT /old_locus_tag="TVS0120" FT /product="putative hydrolase" FT /db_xref="GOA:B6EPM7" FT /db_xref="InterPro:IPR000073" FT /db_xref="InterPro:IPR012020" FT /db_xref="UniProtKB/TrEMBL:B6EPM7" FT /protein_id="CAQ77981.1" FT /translation="MMDQFTPITGLSNAHIQTLLPRLLRRHPLFNAYWQRLELPDGDFV FT DLAWSENPNTAGNKPLFILFHGLEGSFESPYANGLLSSAKEQGWLGVMMHFRGCSDVPN FT RLEKAYHSGETEDARFFLETIHDRFPNRVKVATGVSLGGNMLVNYLAKYNSNTLLNAAT FT IISAPLDLSACSERIQQGFSRVYQGYLLRSLKTNSIKKLNSTRKHIVGLDKDMIAAIPD FT LLQFDNLITAPLNDYADAQDYYQQCSGLQFLNDINIPTRIIHAKDDPFMTTAVIPTHPL FT PNCVHYQLTEHGGHVGFINGSMTKPNFWLEDTVNRWFQTVV" FT misc_feature complement(342554..343234) FT /locus_tag="VSAL_I0296" FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase FT fold,score 1.5e-07" FT /inference="protein motif:HMMPfam:PF00561" FT CDS complement(343518..344000) FT /transl_table=11 FT /locus_tag="VSAL_I0297" FT /old_locus_tag="TVS0121" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR012659" FT /db_xref="UniProtKB/TrEMBL:B6EPM8" FT /protein_id="CAQ77982.1" FT /translation="MKPAHNGILTPTQQAQLTTDAFWAFSLSHYKKEGVQQACLTLQDQ FT YSGNVNLVLLFIWLDSLAISISKTQRHQLQDALFYTDPLLISYRSLRKNIKLTESKTLY FT QQALNFELQLEKQQQHDLLHTLHRIDLNQTQLTHSTLLSLYCVSLNAQSLLNTLHP" FT CDS complement(343984..345915) FT /transl_table=11 FT /locus_tag="VSAL_I0298" FT /old_locus_tag="TVS0122" FT /product="ABC transporter ATP-binding protein" FT /db_xref="GOA:B6EPM9" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EPM9" FT /protein_id="CAQ77983.1" FT /translation="MITFSDIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFA FT LIKGELSVDGGSNRVPHHWELAWVAQETPALERKALDYVIDGDREYRNLEAQLIEAEEA FT DNGTLVAELHSKIDIVGGYTINSRAAELLNGLGFSQQQMDWNLTQFSGGWRMRLNLAQA FT LLCHSDLLLLDEPTNHLDLDAVMWLERWLQNYPGTLMLISHDRDFLDPVINRIVHVENQ FT QLNEYTGNYSSFEIQRSEKLVLQQAKYQKQQKNMSHMQSYIDRFRYKASKARQAQSRIK FT ALEKMEKVLPAQLDNPFTFNFREPDALPNPILMMDEVSAGYENNTILEQIRLNLVPGSR FT IGLLGRNGAGKSTLIKILSGELAPQSGIFTYSQGVKIGYFAQHQLETLQVEETPLQHLM FT QVAPNHTEQQLRDYLGSFGFKGEKALDKVGPFSGGEKARLVLALVVWQKPNMLLLDEPT FT NHLDLDMRQALTMALQTFEGAMVIVSHDRYLLRATTDDLYLVHDRQVMPFDGDLNDYYK FT WLTEQNKSERKEQLQQDKQDSPSASTSLSAAEKKEQKRKEAEFRKQIAPLRKEVTKLEK FT KMDALNNTISKAEEELGDVSLYEAENKKRLTEVLATQASAKSELEDVEMEWMDLQEQIE FT EKENEARS" FT misc_feature complement(344407..344904) FT /locus_tag="VSAL_I0298" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 3.8e-49" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(344581..344625) FT /locus_tag="VSAL_I0298" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(344860..344883) FT /locus_tag="VSAL_I0298" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(345250..345837) FT /locus_tag="VSAL_I0298" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.3e-43" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(345424..345468) FT /locus_tag="VSAL_I0298" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(345793..345816) FT /locus_tag="VSAL_I0298" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 346064..346636 FT /transl_table=11 FT /gene="kefG" FT /locus_tag="VSAL_I0299" FT /old_locus_tag="TVS0123" FT /product="glutathione-regulated potassium-efflux system FT ancillary protein KefG" FT /db_xref="GOA:B6EPN0" FT /db_xref="InterPro:IPR003680" FT /db_xref="UniProtKB/TrEMBL:B6EPN0" FT /protein_id="CAQ77984.1" FT /translation="MTQSNDVLLTSTPLPKILVILAHPDPEHSIANKAILAAYQQLPHV FT TVHDLYATYPEFFIDVVYEHELLAQHDIIVFQHPLYLYSCPSLLKEWMDCVLGKGFAYG FT EGNALKGKQWRSVITAGGIEEAFSETGYNQHSMDDILIPFKITAALCQMEWITPSVQYW FT ARKITIEKRQSYINDYRNWLLNPKGEL" FT misc_feature 346106..346627 FT /gene="kefG" FT /locus_tag="VSAL_I0299" FT /note="HMMPfam hit to PF02525, Flavodoxin-like fold, score FT 5.8e-56" FT /inference="protein motif:HMMPfam:PF02525" FT CDS 346636..348426 FT /transl_table=11 FT /gene="kefB" FT /locus_tag="VSAL_I0300" FT /old_locus_tag="TVS0124" FT /product="glutathione-regulated potassium-efflux system FT protein KefB (K(+)/H(+) antiporter)" FT /db_xref="GOA:B6EPN1" FT /db_xref="InterPro:IPR003148" FT /db_xref="InterPro:IPR004771" FT /db_xref="InterPro:IPR006036" FT /db_xref="InterPro:IPR006153" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPN1" FT /protein_id="CAQ77985.1" FT /translation="MAGDWLHTSAIFLAAAVVTVPLAQRFGLGAVLGYLLAGIAIGPWG FT LQLISDVDAILHFSEFGVVLLLFLIGLELNPNKLWKMRKPIIGLGGSQVVVTSCVITAA FT MMFYGLAWQVSVVIGMGLALSSTAIALRVIEERKLSDSESGQSGFAVLLFQDIAVIPML FT AVLPVLAGGASGNWLDGLWVLAGVIGIFTLGHFLLRPLFSYVVKSGARELFTVAALLLV FT IGVSAAMKELGLSMALGAFLAGVLLAESEFRHELEVAIEPFKGLLLGLFFIAVGMSVNL FT GLLLQYPVEIVIAVTLLVASKGFLLYGLARTFGTQAKARSQMAMILSQGGEFAFVLFTA FT AQMEGLLSKELTAFLLVVVSLSMMTTPLLLIAQDKWFARTLNHEEEMPLSDFTHATQPK FT VIIAGFGRFGQIVGRLLFANKIKLTILEGDPSQIRLLRKFGYKVYYGDATQVELLRAAG FT AEKAEAIVICKTDPQKVMEIVALCKQHFPHLKILARARSRVEAYELLNEGVDHFSRETF FT YGALDLGRQTLTSLGMHPYQAKRAESHFKKLDVAMLKELLPLHSDDKILASKAKAARIE FT LEEIFGLEMESERSNQAHWD" FT misc_feature order(346648..346701,346714..346782,346795..346854, FT 346891..346959,346972..347040,347077..347145, FT 347173..347241,347260..347319,347332..347391, FT 347428..347496,347506..347565,347602..347655, FT 347683..347751) FT /gene="kefB" FT /locus_tag="VSAL_I0300" FT misc_feature 346663..347748 FT /gene="kefB" FT /locus_tag="VSAL_I0300" FT /note="HMMPfam hit to PF00999, Sodium/hydrogen exchanger FT family, score 4.8e-74" FT /inference="protein motif:HMMPfam:PF00999" FT misc_feature 347833..348180 FT /gene="kefB" FT /locus_tag="VSAL_I0300" FT /note="HMMPfam hit to PF02254, TrkA-N domain, score FT 8.8e-28" FT /inference="protein motif:HMMPfam:PF02254" FT CDS 348447..348641 FT /transl_table=11 FT /locus_tag="VSAL_I0301" FT /old_locus_tag="TVS0125" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR012658" FT /db_xref="UniProtKB/TrEMBL:B6EPN2" FT /protein_id="CAQ77986.1" FT /translation="MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPK FT SIETSKHAQDDVIGVFKPE" FT CDS 348699..349289 FT /transl_table=11 FT /gene="slyD" FT /locus_tag="VSAL_I0302" FT /old_locus_tag="TVS0126" FT /product="FKBP-type peptidyl-prolyl cis-trans isomerase FT SlyD" FT /EC_number="5.2.1.8" FT /db_xref="GOA:B6EPN3" FT /db_xref="InterPro:IPR001179" FT /db_xref="UniProtKB/TrEMBL:B6EPN3" FT /protein_id="CAQ77987.1" FT /translation="MKIEKNVVVSLAYQVKTEEGVVVDQSTAEAPLDYLHGHDNLIVGL FT EKALEGKVAGDKFSITVAPEEAYGEHMDEMIQRVPADVFQGVEQIEVGMRFLADTDQGP FT IPVEVTEVDGDEVVVDGNHMLAGQTLGFEVEVIAVRAATEEEATHGHVHQEGGCGHDHG FT HDHDHEGGCCGGEGHSHEHKEDHECCGSGNCSK" FT misc_feature 348699..349109 FT /gene="slyD" FT /locus_tag="VSAL_I0302" FT /note="HMMPfam hit to PF00254, FKBP-type peptidyl-prolyl FT cis-trans isomeras, score 8.2e-05" FT /inference="protein motif:HMMPfam:PF00254" FT misc_feature 348699..348893 FT /locus_tag="VSAL_I0301" FT /note="PS00430 TonB-dependent receptor proteins signature FT 1." FT /inference="protein motif:ProSite:PS00430" FT misc_feature 348729..348776 FT /locus_tag="VSAL_I0301" FT /note="PS00453 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 1." FT /inference="protein motif:ProSite:PS00453" FT misc_feature 348819..348905 FT /locus_tag="VSAL_I0301" FT /note="PS00454 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 2." FT /inference="protein motif:ProSite:PS00454" FT CDS complement(349477..349701) FT /transl_table=11 FT /locus_tag="VSAL_I0303" FT /old_locus_tag="TVS0127" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli Protein SlyX FT UniProt:P0A8R4 (72 aa) fasta scores: E()=1.4e-06, 37.313% FT id in 67 aa" FT /db_xref="InterPro:IPR007236" FT /db_xref="UniProtKB/Swiss-Prot:B6EPQ8" FT /inference="similar to sequence:UniProt:P0A8R4" FT /protein_id="CAQ77988.1" FT /translation="MTTDIKQLELKISDLECQMAFQEQTIDELNDALSQQQLLITNMQV FT QMKFVVGKMKTMDTSSMADASEETPPPHY" FT misc_feature complement(349480..349683) FT /locus_tag="VSAL_I0303" FT /note="HMMPfam hit to PF04102, SlyX, score 6.6e-31" FT /inference="protein motif:HMMPfam:PF04102" FT CDS complement(349698..350714) FT /transl_table=11 FT /locus_tag="VSAL_I0304" FT /old_locus_tag="TVS0128" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR001680" FT /db_xref="InterPro:IPR011047" FT /db_xref="InterPro:IPR015943" FT /db_xref="InterPro:IPR017986" FT /db_xref="InterPro:IPR019775" FT /db_xref="UniProtKB/TrEMBL:B6EPQ9" FT /protein_id="CAQ77989.1" FT /translation="MRVISQYLAIFVITLTLAGCFFNNSDVQRWEMAPEGTTSFALSRD FT ARFALFYVKPHPKDKNPQLNKKSGLHFWDLIENKELTYFGEQDQLKSVVSHIKISDNSR FT FAITATQTNFAVWDLGMGVSEGLWSISDGIIRDVDISSNGQQVLLGLSNGKAIYIDLAT FT GRRLEFLAHREKINSVALSANGKFALSGGNDHFAYFWDTTTGQIIYTFEHDKRVSRIAL FT QRDGKFALTADGGNEGFIWDLKTGQKISTLSTFSRQQVFSTARFSDDGNYLVTGSPAGT FT IKLWNIPSGKKQEQWRAEPLKDARPPTAVVYDVAIDKKQRVISATSAGIAQAWLIEE" FT misc_feature complement(350109..350153) FT /locus_tag="VSAL_I0304" FT /note="PS00678 Trp-Asp (WD) repeats signature." FT /inference="protein motif:ProSite:PS00678" FT misc_feature complement(350112..350225) FT /locus_tag="VSAL_I0304" FT /note="HMMPfam hit to PF00400, WD domain, G-beta FT repeat,score 0.0011" FT /inference="protein motif:HMMPfam:PF00400" FT sig_peptide complement(350640..350714) FT /locus_tag="VSAL_I0304" FT misc_feature complement(350655..350687) FT /locus_tag="VSAL_I0304" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 350844..351638 FT /transl_table=11 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /old_locus_tag="TVS0129" FT /product="FKBP-type peptidyl-prolyl cis-trans isomerase FT FkpA precursor" FT /EC_number="5.2.1.8" FT /db_xref="GOA:B6EPR0" FT /db_xref="InterPro:IPR000774" FT /db_xref="InterPro:IPR001179" FT /db_xref="InterPro:IPR023566" FT /db_xref="UniProtKB/TrEMBL:B6EPR0" FT /experiment="FkpA probably acts in the folding of FT extracytoplasmic proteins. The expressed protein is found FT to be associated with the outer membrane of Aliivibrio FT salmonicida" FT /protein_id="CAQ77990.1" FT /translation="MKSIFKVSLLAATVAFVVGCQKEEAPKTEATTLPAKIEASAEGAT FT ASTFASEDEKAGYAIGASLAKYLNSNLEKQTELGLDLKKADVLAGVTDVFNGKERLTDE FT QIQGALQALDQRVAEIGKKKAAAESEANIKAGADYRAKFAKEDGVIKTESGLLYKVLTP FT ADGPKPKDTDTVVVHYTGTLIDGTKFDSSYDRKQPATFPLNAVIPGWTEGVQLMNVGSK FT YKFVVPAELGYGAQGNQAIPANSTLVFDVELLEIKDAAKPAK" FT sig_peptide 350844..350909 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT misc_feature 350871..350903 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 350937..351323 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /note="HMMPfam hit to PF01346, Domain amino terminal to FT FKBP-type peptidyl-, score 7.6e-28" FT /inference="protein motif:HMMPfam:PF01346" FT misc_feature 351333..351605 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /note="HMMPfam hit to PF00254, FKBP-type peptidyl-prolyl FT cis-trans isomeras, score 1e-47" FT /inference="protein motif:HMMPfam:PF00254" FT misc_feature 351372..351419 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /note="PS00453 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 1." FT /inference="protein motif:ProSite:PS00453" FT misc_feature 351459..351545 FT /gene="fkpA" FT /locus_tag="VSAL_I0305" FT /note="PS00454 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 2." FT /inference="protein motif:ProSite:PS00454" FT CDS 351827..352540 FT /transl_table=11 FT /locus_tag="VSAL_I0306" FT /old_locus_tag="TVS0130" FT /product="putative DNA-binding protein" FT /db_xref="GOA:B6EPR1" FT /db_xref="InterPro:IPR013559" FT /db_xref="UniProtKB/TrEMBL:B6EPR1" FT /protein_id="CAQ77991.1" FT /translation="MVNMNIETAIEERLSEMKPFTEFDHHILQSYEAVVDGIASLIGNY FT CEIVLHSLEDINKSAVKIANGENTGRKVGSPITDLALQMLKDIQRSKRNFSRSYFTRAK FT GGVLMKSITIAIRNGDQRIIGLLCININLDAPFSQVLQSFMPSEEANEAASSVNFASDV FT DELVDQTVKRTIDEINADKEVGNNAKNKQIVIDLYDKGIFDIKDAINRVADQLNISKHT FT VYLYIRQRKIEDGEK" FT misc_feature 351905..352255 FT /locus_tag="VSAL_I0306" FT /note="HMMPfam hit to PF08348, YheO-like protein, score FT 6.3e-62" FT /inference="protein motif:HMMPfam:PF08348" FT misc_feature 352445..352510 FT /locus_tag="VSAL_I0306" FT /note="Predicted helix-turn-helix motif with score FT 1246.000, SD 3.43 at aa 207-228, sequence FT DAINRVADQLNISKHTVYLYIR" FT CDS 352537..352929 FT /transl_table=11 FT /gene="dsrE" FT /locus_tag="VSAL_I0307" FT /old_locus_tag="TVS0131" FT /product="intracellular sulfur oxidation protein DsrE" FT /EC_number="2.8.1.-" FT /db_xref="GOA:B6EPR2" FT /db_xref="InterPro:IPR003787" FT /db_xref="InterPro:IPR017463" FT /db_xref="UniProtKB/TrEMBL:B6EPR2" FT /protein_id="CAQ77992.1" FT /translation="MSLTYGIVVNGSAYGTQASRQAYQFSKALIEQGHTLKKVFFYQDG FT VLNASALILPANDEVNITQAWQQLASEHSIELETCVAAALRRGVIGEEEANQHKLSQHN FT LASGFQQAGLGGLATALLRYDRVIQF" FT misc_feature 352543..352926 FT /gene="dsrE" FT /locus_tag="VSAL_I0307" FT /note="HMMPfam hit to PF02635, DsrE/DsrF-like family,score FT 2.9e-46" FT /inference="protein motif:HMMPfam:PF02635" FT CDS 352959..353315 FT /transl_table=11 FT /gene="dsrF" FT /locus_tag="VSAL_I0308" FT /old_locus_tag="TVS0132" FT /product="intracellular sulfur oxidation protein DsrF" FT /db_xref="InterPro:IPR003787" FT /db_xref="InterPro:IPR017462" FT /db_xref="UniProtKB/TrEMBL:B6EPR3" FT /protein_id="CAQ77993.1" FT /translation="MNRLGFVFQSSPHSTTQGREGLDAILAASAYSDDIRIFFVGDGIL FT QLLKSQKPEMILSRDYIAGFKMLELYDLDDIFVDKAALANRGITESHLLIDAHLISIEY FT LNEKLSQCDQVMVF" FT misc_feature 352962..353312 FT /gene="dsrF" FT /locus_tag="VSAL_I0308" FT /note="HMMPfam hit to PF02635, DsrE/DsrF-like family,score FT 1.6e-31" FT /inference="protein motif:HMMPfam:PF02635" FT CDS 353325..353612 FT /transl_table=11 FT /locus_tag="VSAL_I0309" FT /old_locus_tag="TVS0133" FT /product="Hypothetical protein" FT /db_xref="GOA:B6EPR4" FT /db_xref="InterPro:IPR007215" FT /db_xref="UniProtKB/TrEMBL:B6EPR4" FT /protein_id="CAQ77994.1" FT /translation="MLHILTKVENLQTVRMNELPINKESDRVLLTKDCVYAGINDHKDH FT SVILSFKQCYILQEDAEARGVLSLINNKIQLVNYSSFVVLTQEHSPTVTW" FT CDS 353778..354152 FT /transl_table=11 FT /gene="rpsL" FT /locus_tag="VSAL_I0310" FT /old_locus_tag="TVS0135" FT /product="30S ribosomal protein S12" FT /db_xref="GOA:B6EPR5" FT /db_xref="InterPro:IPR005679" FT /db_xref="InterPro:IPR006032" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/Swiss-Prot:B6EPR5" FT /protein_id="CAQ77995.1" FT /translation="MATINQLVRQPRAKQVVKSNVPALEACPQKRGVCTRVYTTTPKKP FT NSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDC FT AGVNDRKKGRSKYGVKRPKS" FT misc_feature 353781..354146 FT /gene="rpsL" FT /locus_tag="VSAL_I0310" FT /note="HMMPfam hit to PF00164, Ribosomal protein S12,score FT 1.3e-74" FT /inference="protein motif:HMMPfam:PF00164" FT misc_feature 353904..353927 FT /gene="rpsL" FT /locus_tag="VSAL_I0310" FT /note="PS00055 Ribosomal protein S12 signature." FT /inference="protein motif:ProSite:PS00055" FT CDS 354263..354733 FT /transl_table=11 FT /gene="rpsG" FT /locus_tag="VSAL_I0311" FT /old_locus_tag="TVS0136" FT /product="30S ribosomal protein S7" FT /db_xref="GOA:B6EPR6" FT /db_xref="InterPro:IPR000235" FT /db_xref="InterPro:IPR005717" FT /db_xref="InterPro:IPR020606" FT /db_xref="InterPro:IPR023798" FT /db_xref="UniProtKB/Swiss-Prot:B6EPR6" FT /protein_id="CAQ77996.1" FT /translation="MPRRRVIGQRKILPDPKFKSELLAKFVNIVMVDGKKSTAEKIVYG FT ALELMAEKSGKDHLAVFEEALENIRPSVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWL FT VEAARKRGEKSMAQRLANEMLDASENKGTSVKKREDVHRMADANKAFAHYRW" FT misc_feature 354266..354709 FT /gene="rpsG" FT /locus_tag="VSAL_I0311" FT /note="HMMPfam hit to PF00177, Ribosomal protein FT S7p/S5e,score 7.5e-85" FT /inference="protein motif:HMMPfam:PF00177" FT misc_feature 354320..354400 FT /gene="rpsG" FT /locus_tag="VSAL_I0311" FT /note="PS00052 Ribosomal protein S7 signature." FT /inference="protein motif:ProSite:PS00052" FT CDS 354867..356954 FT /transl_table=11 FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /old_locus_tag="TVS0138" FT /product="elongation factor G" FT /db_xref="GOA:B6EPR7" FT /db_xref="InterPro:IPR000640" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR004540" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR005517" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009022" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:B6EPR7" FT /protein_id="CAQ77997.1" FT /translation="MARNTPIERYRNIGICAHVDAGKTTTTERILFYTGLSHKIGEVHD FT GAATMDWMEQEQERGITITSAATTTFWRGMDAQFQDHRINIIDTPGHVDFTIEVERSLR FT VLDGAVVVFCASSGVEPQSETVWRQADKYGVPRIVFVNKMDRAGADFLRVIEQIKNRLG FT ANPVPIQLNIGAEEDFGGVIDLIKMKTINWNEADQGMTFSYEEIPADMQELADEWRLNL FT VEAAAEASEELMDKYLEGEELTEAEIKNALRTRTINNEIVLATCGSAFKNKGVQAVLDA FT VVEFLPAPIDVPAIKGLDENDNEVERHADDNEPFAALAFKIATDPFVGTLTFIRVYSGV FT VNSGDGVYNSVKQKRERFGRIVQLHANKREEVKEIRAGDIAAAIGLKDVTTGDTLCDQN FT AKVVLERMEFPEPVIQIAVEPRTQADQEKMGVALGKLAAEDPSFRVETDKESGQTLISG FT MGELHLDIIVDRMKREFSVECNVGKPQVAYRETIRGKAEVEGKFIRQSGGRGQYGHVWL FT RIEPAEHDAGFVFVDETVGGSVPREYISSVAKGIEEQMHNGVLAGYPVLDVKATLFDGS FT YHDVDSNEMAFRIAGSMAFKNGALEAQPVILEPTMKVEITTPEDWMGDVVGDLNRRRGM FT IEGMDDGVAGLKIIRAQVPLSEMFGYATSLRSATQGRASYSMEFSEYGEVPKNVADRIM FT G" FT misc_feature order(354888..355041,355047..355736) FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /note="HMMPfam hit to PF00009, Elongation factor Tu GTP FT binding domain, score 2e-111" FT /inference="protein motif:HMMPfam:PF00009" FT misc_feature 354915..354938 FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 355851..356054 FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /note="HMMPfam hit to PF03144, Elongation factor Tu domain, FT score 9.6e-21" FT /inference="protein motif:HMMPfam:PF03144" FT misc_feature 356316..356675 FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /note="HMMPfam hit to PF03764, Elongation factor G, domain FT IV, score 5.5e-70" FT /inference="protein motif:HMMPfam:PF03764" FT misc_feature 356679..356945 FT /gene="fusA" FT /locus_tag="VSAL_I0312" FT /note="HMMPfam hit to PF00679, Elongation factor G FT C-terminus, score 3.2e-49" FT /inference="protein motif:HMMPfam:PF00679" FT CDS 357073..358257 FT /transl_table=11 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /old_locus_tag="TVSa0184" FT /product="elongation factor Tu" FT /db_xref="GOA:B6ENS0" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004160" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR004541" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="UniProtKB/TrEMBL:B6ENS0" FT /protein_id="CAQ77998.1" FT /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAICTTLAKIYGGVAK FT DFASIDNAPEERERGITISTSHVEYDTPARHYAHVDCPGHADYVKNMITGAAQMDGGIL FT VVAATDGPMPQTREHILLGRQVGIPFIVVFMNKCDMVDDEELLELVEMEVRELLSEYDY FT PGDDLPVIQGSALGALNGEKQWEDKIIELAEALDTYIPLPERAVDMPFLLPIEDVFSIQ FT GRGTVVTGRIERGILRVGDEVEIIGIKETTVSTCTGVEMFRKLLDEGRAGENVGALLRG FT TKRDDVERGQVLAAKGSINPHTKFESEVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTG FT DITLPEGVEMVMPGDNVQMTVELIAPIAMDEGLRFAIREGGRTVGAGVVAKIFA" FT misc_feature 357100..357684 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /note="HMMPfam hit to PF00009, Elongation factor Tu GTP FT binding domain, score 1.3e-97" FT /inference="protein motif:HMMPfam:PF00009" FT misc_feature 357127..357150 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 357223..357270 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /note="PS00301 GTP-binding elongation factors signature." FT /inference="protein motif:ProSite:PS00301" FT misc_feature 357745..357954 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /note="HMMPfam hit to PF03144, Elongation factor Tu domain, FT score 2.4e-24" FT /inference="protein motif:HMMPfam:PF03144" FT misc_feature 357967..358251 FT /gene="tuf" FT /locus_tag="VSAL_I0313" FT /note="HMMPfam hit to PF03143, Elongation factor Tu FT C-terminal domain, score 2.5e-60" FT /inference="protein motif:HMMPfam:PF03143" FT repeat_region complement(order(358438..359302,362595..363168)) FT /note="VSa9" FT CDS complement(join(358604..359302,362595..363089)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0314" FT /old_locus_tag="TVSa0185" FT /product="transposase (pseudogene)" FT /note="Similar to Pasteurella piscicida Putative FT transposase UniProt:Q2VL27 (402 aa) fasta scores: FT E()=9.9e-89, 49.6% id in 387 aa. CDS is disrupted by the FT insertion of two IS elements after codon 165" FT /db_xref="PSEUDO:CAQ77999.1" FT /inference="similar to sequence:UniProt:Q2VL27" FT misc_feature complement(358814..359302) FT /locus_tag="VSAL_I0314" FT /note="HMMPfam hit to PF04986, Putative transposase, score FT 3e-24" FT /inference="protein motif:HMMPfam:PF04986" FT repeat_region order(359306..360102,361108..362589) FT /note="VSa2" FT repeat_region 359306..359329 FT /note="IR of VSa2" FT CDS 359387..359698 FT /transl_table=11 FT /locus_tag="VSAL_I0315" FT /old_locus_tag="TVS4514" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EKJ3" FT /protein_id="CAQ78000.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPATEPHWIGLLLKGYQS" FT CDS 359695..360042 FT /transl_table=11 FT /locus_tag="VSAL_I0316" FT /old_locus_tag="TVS4515" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78001.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT misc_feature 359710..360036 FT /locus_tag="VSAL_I0316" FT /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score FT 5.1e-32" FT /inference="protein motif:HMMPfam:PF05717" FT repeat_region complement(360103..361107) FT /note="VSa6" FT repeat_region complement(360103..360121) FT /note="IR of VSa6" FT CDS complement(360130..361011) FT /transl_table=11 FT /locus_tag="VSAL_I0317" FT /old_locus_tag="TVS4516" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ78002.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature complement(360190..360684) FT /locus_tag="VSAL_I0317" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(361089..361107) FT /note="IR of VSa6" FT CDS join(361121..361339,361338..362573) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0318" FT /old_locus_tag="TVSa0189" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=1.8e-109, 55.781% id in 493 aa. CDS FT contains a frameshift after codon 73" FT /db_xref="PSEUDO:CAQ78003.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT misc_feature 361410..362009 FT /locus_tag="VSAL_I0318" FT /note="HMMPfam hit to PF03050, Transposase IS66 FT family,score 8.3e-57" FT /inference="protein motif:HMMPfam:PF03050" FT repeat_region 362566..362589 FT /note="IR of VSa2" FT CDS 363557..363868 FT /transl_table=11 FT /gene="rpsJ" FT /locus_tag="VSAL_I0319" FT /old_locus_tag="TVS3217" FT /product="30S ribosomal subunit protein S10" FT /db_xref="GOA:B6EPS4" FT /db_xref="InterPro:IPR001848" FT /db_xref="InterPro:IPR005731" FT /db_xref="InterPro:IPR018268" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS4" FT /protein_id="CAQ78004.1" FT /translation="MQNQRIRIRLKAFDYKLIDQSTAEIVETAKRTGAQVRGPIPLPTR FT KERFTVLTSPHVNKDARDQYEIRTHKRLIDIVEPTDKTVDALMRLDLAAGVDVQISLG" FT misc_feature 363569..363856 FT /gene="rpsJ" FT /locus_tag="VSAL_I0319" FT /note="HMMPfam hit to PF00338, Ribosomal protein S10p/S20e, FT score 2e-60" FT /inference="protein motif:HMMPfam:PF00338" FT misc_feature 363641..363688 FT /gene="rpsJ" FT /locus_tag="VSAL_I0319" FT /note="PS00361 Ribosomal protein S10 signature." FT /inference="protein motif:ProSite:PS00361" FT CDS 363881..364510 FT /transl_table=11 FT /gene="rplC" FT /locus_tag="VSAL_I0320" FT /old_locus_tag="TVS3218" FT /product="50S ribosomal protein L3" FT /db_xref="GOA:B6EPS5" FT /db_xref="InterPro:IPR000597" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR019926" FT /db_xref="InterPro:IPR019927" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS5" FT /protein_id="CAQ78005.1" FT /translation="MIGLVGRKVGMTRIFTEEGVSIPVTVVEVEVNRVSQVKTVETDGY FT NAIQVTCGSKKANRVSKPEAGHFAKAGVEAGRGLWEFRLENGEEFTVGAELSVEIFNEI FT KKVDVTGTSKGKGFQGAIKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAG FT HMGAERCTTQNLEIVRVDAERNLLLIKGAVPGSTGGNVIVKPAVKA" FT misc_feature 363902..364492 FT /gene="rplC" FT /locus_tag="VSAL_I0320" FT /note="HMMPfam hit to PF00297, Ribosomal protein L3, score FT 5.2e-98" FT /inference="protein motif:HMMPfam:PF00297" FT misc_feature 364181..364252 FT /gene="rplC" FT /locus_tag="VSAL_I0320" FT /note="PS00474 Ribosomal protein L3 signature." FT /inference="protein motif:ProSite:PS00474" FT CDS 364528..365130 FT /transl_table=11 FT /gene="rplD" FT /locus_tag="VSAL_I0321" FT /old_locus_tag="TVS3219" FT /product="50S ribosomal protein L4" FT /db_xref="GOA:B6EPS6" FT /db_xref="InterPro:IPR002136" FT /db_xref="InterPro:IPR013005" FT /db_xref="InterPro:IPR023574" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS6" FT /protein_id="CAQ78006.1" FT /translation="MELMVKGAAALTVSETTFGREFNEALVHQVVVAYAAGARQGTRAQ FT KTRSEVSGGGAKPWRQKGTGRARAGTIRSPIWRSGGVTFAAKPQDHSLKVNKKMYRGAL FT KSILSELVRQDRLIVVEDFSIEAPKTKELVAKLKELELNDVLIVTGEVDENLFLAARNL FT YKVDARDVAGIDPVSLVAFNKVLMTAAAVKQVEEMLA" FT misc_feature 364555..365121 FT /gene="rplD" FT /locus_tag="VSAL_I0321" FT /note="HMMPfam hit to PF00573, Ribosomal protein L4/L1 FT family, score 2.6e-55" FT /inference="protein motif:HMMPfam:PF00573" FT CDS 365127..365429 FT /transl_table=11 FT /gene="rplW" FT /locus_tag="VSAL_I0322" FT /old_locus_tag="TVS3220" FT /product="50S ribosomal protein L23" FT /db_xref="GOA:B6EPS7" FT /db_xref="InterPro:IPR012677" FT /db_xref="InterPro:IPR012678" FT /db_xref="InterPro:IPR013025" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS7" FT /protein_id="CAQ78007.1" FT /translation="MISEERLLKVLRGPHISEKATMTAEGNNTIVFKVVINATKKEIKA FT AVEKLFEVEVKSVNTLITKGKTKRQGARQGRRSDVKKAYVILKEGQDLDFVGGAE" FT misc_feature 365148..365423 FT /gene="rplW" FT /locus_tag="VSAL_I0322" FT /note="HMMPfam hit to PF00276, Ribosomal protein L23,score FT 9.3e-33" FT /inference="protein motif:HMMPfam:PF00276" FT CDS 365445..366269 FT /transl_table=11 FT /gene="rplB" FT /locus_tag="VSAL_I0323" FT /old_locus_tag="TVS3221" FT /product="50S ribosomal protein L2" FT /db_xref="GOA:B6EPS8" FT /db_xref="InterPro:IPR002171" FT /db_xref="InterPro:IPR005880" FT /db_xref="InterPro:IPR008991" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR014722" FT /db_xref="InterPro:IPR014726" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR022666" FT /db_xref="InterPro:IPR022669" FT /db_xref="InterPro:IPR022671" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS8" FT /protein_id="CAQ78008.1" FT /translation="MAIVKCKPTSPGRRHVVKIVNADLHKGKPYAPLLEKNSKSGGRNN FT NGRITVRHVGGGHKQHYRLIDFKRTKDGIPAIVERLEYDPNRSANIALVLFADGERRYI FT IAPKGLKAGDTVQSGVDAPIKAGNCLPLRNIPVGSTVHCVELKPGKGAQVARSAGAYAQ FT IIARDGAYVTLRLRSGEMRKVLSEGRATIGEVGNSEHMLRELGKAGATRWRGVRPTVRG FT VAMNPVDHPHGGGEGRTSGGRHPVSPWGMPTKGFKTRKNKSTDKYIVRRRNK" FT misc_feature 365568..365798 FT /gene="rplB" FT /locus_tag="VSAL_I0323" FT /note="HMMPfam hit to PF00181, Ribosomal Proteins L2, RNA FT binding dom, score 1.1e-45" FT /inference="protein motif:HMMPfam:PF00181" FT misc_feature 365814..366200 FT /gene="rplB" FT /locus_tag="VSAL_I0323" FT /note="HMMPfam hit to PF03947, Ribosomal Proteins FT L2,C-terminal doma, score 1.4e-87" FT /inference="protein motif:HMMPfam:PF03947" FT misc_feature 366096..366131 FT /gene="rplB" FT /locus_tag="VSAL_I0323" FT /note="PS00467 Ribosomal protein L2 signature." FT /inference="protein motif:ProSite:PS00467" FT CDS 366289..366567 FT /transl_table=11 FT /gene="rpsS" FT /locus_tag="VSAL_I0324" FT /old_locus_tag="TVS3222" FT /product="30S ribosomal protein S19" FT /db_xref="GOA:B6EPS9" FT /db_xref="InterPro:IPR002222" FT /db_xref="InterPro:IPR005732" FT /db_xref="InterPro:IPR020934" FT /db_xref="InterPro:IPR023575" FT /db_xref="UniProtKB/Swiss-Prot:B6EPS9" FT /protein_id="CAQ78009.1" FT /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPTMI FT NLTIAVHNGRQHVPVFVTEDMIGHKLGEFAPTRTYRGHAADKKAKKR" FT misc_feature 366295..366537 FT /gene="rpsS" FT /locus_tag="VSAL_I0324" FT /note="HMMPfam hit to PF00203, Ribosomal protein S19,score FT 9.3e-52" FT /inference="protein motif:HMMPfam:PF00203" FT misc_feature 366445..366519 FT /gene="rpsS" FT /locus_tag="VSAL_I0324" FT /note="PS00323 Ribosomal protein S19 signature." FT /inference="protein motif:ProSite:PS00323" FT CDS 366578..366910 FT /transl_table=11 FT /gene="rplV" FT /locus_tag="VSAL_I0325" FT /old_locus_tag="TVS3223" FT /product="50S ribosomal subunit protein L22" FT /db_xref="GOA:B6EPT0" FT /db_xref="InterPro:IPR001063" FT /db_xref="InterPro:IPR005727" FT /db_xref="InterPro:IPR018260" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT0" FT /protein_id="CAQ78010.1" FT /translation="MEAIAKHRFASISPQKARLVADQIRGKSVDQALEILTFSNKKAAV FT IIKKVVESAIANAEHNEGADIDDLNVAKIFVDEGPIMKRIMPRAKGRADRILKRSSHIT FT IVVADR" FT misc_feature 366590..366904 FT /gene="rplV" FT /locus_tag="VSAL_I0325" FT /note="HMMPfam hit to PF00237, Ribosomal protein L22p/L17e, FT score 5.1e-56" FT /inference="protein motif:HMMPfam:PF00237" FT misc_feature 366638..366661 FT /gene="rplV" FT /locus_tag="VSAL_I0325" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 366824..366898 FT /gene="rplV" FT /locus_tag="VSAL_I0325" FT /note="PS00464 Ribosomal protein L22 signature." FT /inference="protein motif:ProSite:PS00464" FT CDS 366930..367628 FT /transl_table=11 FT /gene="rpsC" FT /locus_tag="VSAL_I0326" FT /old_locus_tag="TVS3224" FT /product="30S ribosomal subunit protein S3" FT /db_xref="GOA:B6EPT1" FT /db_xref="InterPro:IPR001351" FT /db_xref="InterPro:IPR004044" FT /db_xref="InterPro:IPR004087" FT /db_xref="InterPro:IPR005704" FT /db_xref="InterPro:IPR008282" FT /db_xref="InterPro:IPR009019" FT /db_xref="InterPro:IPR015946" FT /db_xref="InterPro:IPR018280" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT1" FT /protein_id="CAQ78011.1" FT /translation="MGQKVHPNGIRLGIVKPWNATWFASSQEFADNLDGDFKVRQYLTK FT ELKKASLSRIVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRAGVAKIAGVPAQINIA FT EVRKPELDAHLVADSIASQLERRVMFRRAMKRAVQNAMRLGAQGIKVQVGGRLGGAEIA FT RSEWYREGRVPLHTLRADIDYATASAHTQYGVIGVKVWIFKGEVLGGMPAANAVEPKAD FT KPKKQRRSRK" FT misc_feature 366930..367115 FT /gene="rpsC" FT /locus_tag="VSAL_I0326" FT /note="HMMPfam hit to PF00417, Ribosomal protein FT S3,N-terminal domai, score 3.2e-27" FT /inference="protein motif:HMMPfam:PF00417" FT misc_feature 367116..367280 FT /gene="rpsC" FT /locus_tag="VSAL_I0326" FT /note="HMMPfam hit to PF07650, KH domain, score 2.1e-19" FT /inference="protein motif:HMMPfam:PF07650" FT misc_feature 367284..367535 FT /gene="rpsC" FT /locus_tag="VSAL_I0326" FT /note="HMMPfam hit to PF00189, Ribosomal protein FT S3,C-terminal domai, score 2.4e-52" FT /inference="protein motif:HMMPfam:PF00189" FT misc_feature 367416..367520 FT /gene="rpsC" FT /locus_tag="VSAL_I0326" FT /note="PS00548 Ribosomal protein S3 signature." FT /inference="protein motif:ProSite:PS00548" FT CDS 367640..368050 FT /transl_table=11 FT /gene="rplP" FT /locus_tag="VSAL_I0327" FT /old_locus_tag="TVS3225" FT /product="50S ribosomal subunit protein L16" FT /db_xref="GOA:B6EPT2" FT /db_xref="InterPro:IPR000114" FT /db_xref="InterPro:IPR016180" FT /db_xref="InterPro:IPR020798" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT2" FT /protein_id="CAQ78012.1" FT /translation="MLQPKRTKFRKVMTGRNRGLAKGTEVSFGEFGLKAVGRGRLTARQ FT IEAARRAMTRHVKRQGQIWIRVFPDKPITEKPLEVRQGKGKGNVEYWVAQIQPGKVMYE FT MNGVPEELAREAFRLAARKLPIKTTFVTKQVM" FT misc_feature 367640..368032 FT /gene="rplP" FT /locus_tag="VSAL_I0327" FT /note="HMMPfam hit to PF00252, Ribosomal protein L16,score FT 5.1e-85" FT /inference="protein motif:HMMPfam:PF00252" FT misc_feature 367811..367846 FT /gene="rplP" FT /locus_tag="VSAL_I0327" FT /note="PS00586 Ribosomal protein L16 signature 1." FT /inference="protein motif:ProSite:PS00586" FT CDS 368050..368241 FT /transl_table=11 FT /gene="rpmC" FT /locus_tag="VSAL_I0328" FT /old_locus_tag="TVS3225a" FT /product="50S ribosomal protein L29" FT /db_xref="GOA:B6EPT3" FT /db_xref="InterPro:IPR001854" FT /db_xref="InterPro:IPR018254" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT3" FT /protein_id="CAQ78013.1" FT /translation="MKAQDLREKNVEELNEELLNLLREQFNLRMQAATGQLQQTHTLKA FT VRRDIARVKTLLNEKAGA" FT misc_feature 368056..368229 FT /gene="rpmC" FT /locus_tag="VSAL_I0328" FT /note="HMMPfam hit to PF00831, Ribosomal L29 protein,score FT 8.4e-29" FT /inference="protein motif:HMMPfam:PF00831" FT CDS 368241..368495 FT /transl_table=11 FT /gene="rpsQ" FT /locus_tag="VSAL_I0329" FT /old_locus_tag="TVS3225b" FT /product="30S ribosomal protein S17" FT /db_xref="GOA:B6EPT4" FT /db_xref="InterPro:IPR000266" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR019979" FT /db_xref="InterPro:IPR019984" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT4" FT /protein_id="CAQ78014.1" FT /translation="MSEKIRTMQGRVISDKMDKSIVVAIERMVKHPIYGKYIKRTTKLH FT AHDENNECGQGDLVVIRECRPLSKTKSWTLVNIVEKAKA" FT misc_feature 368268..368474 FT /gene="rpsQ" FT /locus_tag="VSAL_I0329" FT /note="HMMPfam hit to PF00366, Ribosomal protein S17,score FT 1.7e-39" FT /inference="protein motif:HMMPfam:PF00366" FT CDS 368658..369029 FT /transl_table=11 FT /gene="rplN" FT /locus_tag="VSAL_I0330" FT /old_locus_tag="TVS3225c" FT /product="50S ribosomal protein L14" FT /db_xref="GOA:B6EPT5" FT /db_xref="InterPro:IPR000218" FT /db_xref="InterPro:IPR005745" FT /db_xref="InterPro:IPR019972" FT /db_xref="InterPro:IPR023571" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT5" FT /protein_id="CAQ78015.1" FT /translation="MIQMQSTLDAADNSGARKVMCIKVLGGSHRRYAHIGDVIKVTVKE FT AIPRGKVKKGDVLKAVVVRTRKGVRRPDGSIIRFDRNACVLLNDTTEQPVGTRIFGPVT FT RELRNAKFMKIVSLAPEVL" FT misc_feature 368658..369026 FT /gene="rplN" FT /locus_tag="VSAL_I0330" FT /note="HMMPfam hit to PF00238, Ribosomal protein L14p/L23e, FT score 2.1e-74" FT /inference="protein motif:HMMPfam:PF00238" FT CDS 369040..369357 FT /transl_table=11 FT /gene="rplX" FT /locus_tag="VSAL_I0331" FT /old_locus_tag="TVS3225d" FT /product="50S ribosomal protein L24" FT /db_xref="GOA:B6EPT6" FT /db_xref="InterPro:IPR003256" FT /db_xref="InterPro:IPR005824" FT /db_xref="InterPro:IPR005825" FT /db_xref="InterPro:IPR008991" FT /db_xref="InterPro:IPR014723" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT6" FT /protein_id="CAQ78016.1" FT /translation="MAAKIRRNDEVIVLVGKDKGKKGKVTKVLETGKVIVEGINLVKKH FT QKPVPALGQQGGIVEKEAAIDASNIAIFNDATGKADRIGFRFEEGKKVRFFKSNGETIS FT N" FT misc_feature 369052..369150 FT /gene="rplX" FT /locus_tag="VSAL_I0331" FT /note="HMMPfam hit to PF00467, KOW motif, score 1.2e-06" FT /inference="protein motif:HMMPfam:PF00467" FT CDS 369385..369924 FT /transl_table=11 FT /gene="rplE" FT /locus_tag="VSAL_I0332" FT /old_locus_tag="TVS0142" FT /product="50S ribosomal protein L5" FT /db_xref="GOA:B6EPT7" FT /db_xref="InterPro:IPR002132" FT /db_xref="InterPro:IPR020929" FT /db_xref="InterPro:IPR020930" FT /db_xref="InterPro:IPR022803" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT7" FT /protein_id="CAQ78017.1" FT /translation="MAKLHDYYKSSVVAELTKEFSYSSVMQVPRVEKITLNMGVGEAIN FT DKKLLENAAADMAIISGQKPLITKARKSVAGFKIREGYPIGCKVTLRGERMWEFLERLV FT SIALPRVRDFRGVSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTSANTD FT AEGRALLAAFNFPFRK" FT misc_feature 369454..369624 FT /gene="rplE" FT /locus_tag="VSAL_I0332" FT /note="HMMPfam hit to PF00281, Ribosomal protein L5, score FT 2e-33" FT /inference="protein motif:HMMPfam:PF00281" FT misc_feature 369634..369918 FT /gene="rplE" FT /locus_tag="VSAL_I0332" FT /note="HMMPfam hit to PF00673, ribosomal L5P family FT C-terminus, score 3e-59" FT /inference="protein motif:HMMPfam:PF00673" FT CDS 369942..370247 FT /transl_table=11 FT /gene="rpsN" FT /locus_tag="VSAL_I0333" FT /old_locus_tag="TVS0143" FT /product="30S ribosomal protein S14" FT /db_xref="GOA:B6EPT8" FT /db_xref="InterPro:IPR001209" FT /db_xref="InterPro:IPR018271" FT /db_xref="InterPro:IPR023036" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT8" FT /protein_id="CAQ78018.1" FT /translation="MAKQSMKAREAKRAKLVTKFAEKRAALKVLISDVNASEEDRWNAV FT LKLQSLPRDSSASRQRNRCNQTGRPHGYLRKFGLSRIKVREACMKGEIPGLRKASW" FT misc_feature 370077..370241 FT /gene="rpsN" FT /locus_tag="VSAL_I0333" FT /note="HMMPfam hit to PF00253, Ribosomal protein S14p/S29e, FT score 4.9e-23" FT /inference="protein motif:HMMPfam:PF00253" FT misc_feature 370128..370196 FT /gene="rpsN" FT /locus_tag="VSAL_I0333" FT /note="PS00527 Ribosomal protein S14 signature." FT /inference="protein motif:ProSite:PS00527" FT CDS 370277..370669 FT /transl_table=11 FT /gene="rpsH" FT /locus_tag="VSAL_I0334" FT /old_locus_tag="TVS0144" FT /product="30S ribosomal protein S8" FT /db_xref="GOA:B6EPT9" FT /db_xref="InterPro:IPR000630" FT /db_xref="UniProtKB/Swiss-Prot:B6EPT9" FT /protein_id="CAQ78019.1" FT /translation="MSMQDPISDMLTRVRNGQSANKVAVKMPSSKLKVAIAALLKAEGY FT IADFAVEGDIKPELEITLKYFQAKQVIEQIQRVSRPGLRVYKKNDALPSVMGGLGIAVI FT STSKGLMSDRAARKAGLGGEIICYVA" FT misc_feature 370289..370666 FT /gene="rpsH" FT /locus_tag="VSAL_I0334" FT /note="HMMPfam hit to PF00410, Ribosomal protein S8, score FT 2.6e-65" FT /inference="protein motif:HMMPfam:PF00410" FT misc_feature 370574..370627 FT /gene="rpsH" FT /locus_tag="VSAL_I0334" FT /note="PS00053 Ribosomal protein S8 signature." FT /inference="protein motif:ProSite:PS00053" FT CDS 370682..371215 FT /transl_table=11 FT /gene="rplF" FT /locus_tag="VSAL_I0335" FT /old_locus_tag="TVS0145" FT /product="50E ribosomal protein L6" FT /db_xref="GOA:B6EPU0" FT /db_xref="InterPro:IPR000702" FT /db_xref="InterPro:IPR002358" FT /db_xref="InterPro:IPR019906" FT /db_xref="InterPro:IPR020040" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU0" FT /protein_id="CAQ78020.1" FT /translation="MSRVAKAPVVLPAGVEVKLNGQEITIKGGKGELTRVLNNAVVVSQ FT EDNSIVFGPREGVANAWAQAGTARALVNNMVVGVNEGFTKKLTLKGVGYRATMKGNAVG FT LTLGFSHPVEHALPEGIKAECPTQTEIIITGCDKQVVGQVAADIRSYRKPEPYKGKGVR FT YADEIVRTKEAKKK" FT misc_feature 370712..370927 FT /gene="rplF" FT /locus_tag="VSAL_I0335" FT /note="HMMPfam hit to PF00347, Ribosomal protein L6, score FT 1.4e-21" FT /inference="protein motif:HMMPfam:PF00347" FT misc_feature 370949..371176 FT /gene="rplF" FT /locus_tag="VSAL_I0335" FT /note="HMMPfam hit to PF00347, Ribosomal protein L6, score FT 5.9e-31" FT /inference="protein motif:HMMPfam:PF00347" FT misc_feature 371141..371167 FT /gene="rplF" FT /locus_tag="VSAL_I0335" FT /note="PS00525 Ribosomal protein L6 signature 1." FT /inference="protein motif:ProSite:PS00525" FT CDS 371225..371578 FT /transl_table=11 FT /gene="rplR" FT /locus_tag="VSAL_I0336" FT /old_locus_tag="TVS0146" FT /product="50S ribosomal protein L18" FT /db_xref="GOA:B6EPU1" FT /db_xref="InterPro:IPR004389" FT /db_xref="InterPro:IPR005484" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU1" FT /protein_id="CAQ78021.1" FT /translation="MDKKASRIRRATRARRKIAELCATRLVVHRTPRHTYAQVIAPNGS FT EVIAAASTVEKAIREQVGNTSNKAAAVAIGKLIAERAIEKGITNVAFDRSGFQYHGRVA FT ALADSAREAGLKF" FT misc_feature 371225..371575 FT /gene="rplR" FT /locus_tag="VSAL_I0336" FT /note="HMMPfam hit to PF00861, Ribosomal L18p/L5e FT family,score 1.5e-50" FT /inference="protein motif:HMMPfam:PF00861" FT CDS 371593..372093 FT /transl_table=11 FT /gene="rpsE" FT /locus_tag="VSAL_I0337" FT /old_locus_tag="TVS0147" FT /product="30S ribosomal protein S5" FT /db_xref="GOA:B6EPU2" FT /db_xref="InterPro:IPR000851" FT /db_xref="InterPro:IPR005324" FT /db_xref="InterPro:IPR005712" FT /db_xref="InterPro:IPR013810" FT /db_xref="InterPro:IPR014720" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR018192" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU2" FT /protein_id="CAQ78022.1" FT /translation="MAKEQQQATDLNEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGR FT IGFGYGKAREVPAAIQKSMEKARRNMFTIALNEGTLHHAVKGRHTGSKVYMQPASEGTG FT IIAGGAMRAVLEVVGVRNVLAKAYGSTNPINVVRATILGLTSVKSPEMVAAKRGLTVEA FT ISE" FT misc_feature 371620..371820 FT /gene="rpsE" FT /locus_tag="VSAL_I0337" FT /note="HMMPfam hit to PF00333, Ribosomal protein FT S5,N-terminal domai, score 7.1e-38" FT /inference="protein motif:HMMPfam:PF00333" FT misc_feature 371674..371772 FT /gene="rpsE" FT /locus_tag="VSAL_I0337" FT /note="PS00585 Ribosomal protein S5 signature." FT /inference="protein motif:ProSite:PS00585" FT misc_feature 371845..372066 FT /gene="rpsE" FT /locus_tag="VSAL_I0337" FT /note="HMMPfam hit to PF03719, Ribosomal protein FT S5,C-terminal domai, score 9.7e-37" FT /inference="protein motif:HMMPfam:PF03719" FT CDS 372099..372278 FT /transl_table=11 FT /gene="rpmD" FT /locus_tag="VSAL_I0338" FT /old_locus_tag="TVS0148" FT /product="50S ribosomal protein L30" FT /note="No description. Coding potential quality = FT -0.00667893331308523" FT /db_xref="GOA:B6EPU3" FT /db_xref="InterPro:IPR005996" FT /db_xref="InterPro:IPR016082" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU3" FT /protein_id="CAQ78023.1" FT /translation="MSKTIKVTQTKSSIGRLPKHVLCLKGLGLRRINHTVELEDTACVR FT GMINKVHYMVKIEE" FT misc_feature 372105..372263 FT /gene="rpmD" FT /locus_tag="VSAL_I0338" FT /note="HMMPfam hit to PF00327, Ribosomal protein FT L30p/L7e,score 1.5e-19" FT /inference="protein motif:HMMPfam:PF00327" FT CDS 372285..372719 FT /transl_table=11 FT /gene="rplO" FT /locus_tag="VSAL_I0339" FT /old_locus_tag="TVS0149" FT /product="50S ribosomal protein L15" FT /db_xref="GOA:B6EPU4" FT /db_xref="InterPro:IPR001196" FT /db_xref="InterPro:IPR005749" FT /db_xref="InterPro:IPR021131" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU4" FT /protein_id="CAQ78024.1" FT /translation="MRLNTLSPAAGSNPSKKRVGRGIGSGLGKTGGRGHKGQKSRSGGK FT VRVGFEGGQMPLKQRLPKFGFTSRKSLVTAEVRLSELAKVEGNVIDLNSLKAANVITKN FT IVFAKVVLSGEIATAVTVKGLRVTKGAKAAIEAAGGKIEE" FT misc_feature 372285..372587 FT /gene="rplO" FT /locus_tag="VSAL_I0339" FT /note="HMMPfam hit to PF01305, Ribosomal protein L15 amino FT terminal re, score 6.7e-51" FT /inference="protein motif:HMMPfam:PF01305" FT misc_feature 372609..372704 FT /gene="rplO" FT /locus_tag="VSAL_I0339" FT /note="HMMPfam hit to PF00256, Ribosomal protein L15,score FT 6.6e-09" FT /inference="protein motif:HMMPfam:PF00256" FT misc_feature 372609..372701 FT /gene="rplO" FT /locus_tag="VSAL_I0339" FT /note="PS00475 Ribosomal protein L15 signature." FT /inference="protein motif:ProSite:PS00475" FT CDS 372740..374071 FT /transl_table=11 FT /gene="secY" FT /locus_tag="VSAL_I0340" FT /old_locus_tag="TVS0150" FT /product="preprotein translocase SecY subunit" FT /db_xref="GOA:B6EPU5" FT /db_xref="InterPro:IPR002208" FT /db_xref="InterPro:IPR023201" FT /db_xref="UniProtKB/TrEMBL:B6EPU5" FT /protein_id="CAQ78025.1" FT /translation="MAKKPGKEVNSAQSGLAELKSRLLFVIGALLVFRAGSFVPIPGID FT AAVLADLFEQQQGTIIEMFNMFSGGALSRASILALGIMPYISASIVVQLLTVVHPPLAE FT LKKEGESGRRKINQYTRYGTLVLATFQAIGISTGLPSMIPGLVSNPDMMFYLTATVSLI FT TGTMFLMWLGEQITERGIGNGISLIIFTGIVAGLPPAIGETIQQARQGELHVLLLLLIA FT VLSFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSI FT ILFPGTLAQWFGGNGEGTFGWLTDVSMALSPGQPLYVMLYAAAIIFFCFFYTALVFNPR FT ETADNLKKSGAFVPGIRPGEQTTKYIDKVMTRLTLAGAMYITFICLIPEFMMIAWNVRF FT YFGGTSLLIVVVVIMDFMAQVQTHLMSQQYESVLKKANLKGYGR" FT misc_feature order(372800..372868,372962..373030,373103..373171, FT 373199..373258,373277..373345,373373..373441, FT 373550..373618,373685..373753,373856..373924, FT 373934..373993) FT /gene="secY" FT /locus_tag="VSAL_I0340" FT misc_feature 372965..373996 FT /gene="secY" FT /locus_tag="VSAL_I0340" FT /note="HMMPfam hit to PF00344, eubacterial secY FT protein,score 7.4e-196" FT /inference="protein motif:HMMPfam:PF00344" FT misc_feature 372965..373024 FT /gene="secY" FT /locus_tag="VSAL_I0340" FT /note="PS00755 Protein secY signature 1." FT /inference="protein motif:ProSite:PS00755" FT misc_feature 373250..373306 FT /gene="secY" FT /locus_tag="VSAL_I0340" FT /note="PS00756 Protein secY signature 2." FT /inference="protein motif:ProSite:PS00756" FT misc_feature 373274..373330 FT /gene="secY" FT /locus_tag="VSAL_I0340" FT /note="PS00095 C-5 cytosine-specific DNA methylases FT C-terminal signature." FT /inference="protein motif:ProSite:PS00095" FT misc_RNA 374286..374394 FT /locus_tag="VSAL_I3105s" FT /product="alpha operon ribosome binding site" FT /note="Alpha operon ribosome binding site (RF00140) FT predicted by Rfam, score 56,91" FT CDS 374362..374718 FT /transl_table=11 FT /gene="rpsM" FT /locus_tag="VSAL_I0341" FT /old_locus_tag="TVS0151" FT /product="30S ribosomal protein S13" FT /db_xref="GOA:B6EPU6" FT /db_xref="InterPro:IPR001892" FT /db_xref="InterPro:IPR010979" FT /db_xref="InterPro:IPR018269" FT /db_xref="InterPro:IPR019980" FT /db_xref="UniProtKB/TrEMBL:B6EPU6" FT /protein_id="CAQ78026.1" FT /translation="MARIAGINIPDHKHAVIALTAIYGIGKTRSQAILAAVGIAEDVKI FT SELNDEQIDILRDGVAKYTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKT FT NARTRKGPRKPIKK" FT misc_feature 374368..374685 FT /gene="rpsM" FT /locus_tag="VSAL_I0341" FT /note="HMMPfam hit to PF00416, Ribosomal protein FT S13/S18,score 7.5e-59" FT /inference="protein motif:HMMPfam:PF00416" FT misc_feature 374389..374475 FT /gene="rpsM" FT /locus_tag="VSAL_I0341" FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT /inference="protein motif:ProSite:PS00061" FT misc_feature 374422..374445 FT /gene="rpsM" FT /locus_tag="VSAL_I0341" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 374620..374661 FT /gene="rpsM" FT /locus_tag="VSAL_I0341" FT /note="PS00646 Ribosomal protein S13 signature." FT /inference="protein motif:ProSite:PS00646" FT CDS 374740..375129 FT /transl_table=11 FT /gene="rpsK" FT /locus_tag="VSAL_I0342" FT /old_locus_tag="TVS0152" FT /product="30S ribosomal protein S11" FT /db_xref="GOA:B6EPU7" FT /db_xref="InterPro:IPR001971" FT /db_xref="InterPro:IPR018102" FT /db_xref="InterPro:IPR019981" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU7" FT /protein_id="CAQ78027.1" FT /translation="MAKQPTRARKRVRKQVADGVAHIHASFNNTIVTITDRQGNALAWA FT TAGGSGFRGSRKSTPFAAQVAAERCGEMAKEYGVKNLEVMVKGPGPGRESTIRALNAAG FT YRITNIVDATPIPHNGCRPPKKRRV" FT misc_feature 374794..375123 FT /gene="rpsK" FT /locus_tag="VSAL_I0342" FT /note="HMMPfam hit to PF00411, Ribosomal protein S11,score FT 1.3e-70" FT /inference="protein motif:HMMPfam:PF00411" FT CDS 375161..375781 FT /transl_table=11 FT /gene="rpsD" FT /locus_tag="VSAL_I0343" FT /old_locus_tag="TVS0153" FT /product="30S ribosomal protein S4" FT /db_xref="GOA:B6EPU8" FT /db_xref="InterPro:IPR001912" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR005709" FT /db_xref="InterPro:IPR018079" FT /db_xref="InterPro:IPR022801" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU8" FT /protein_id="CAQ78028.1" FT /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARR FT GRLSEYGVQLREKQKVRRMYGVLEKQFRNYYKDAARIKGNTGENLLQLLEGRLDNVVYR FT MGFGSTRAESRQLVSHKSILVNGKVVNVPSFKVSANDVVSIREKAKLQSRIKAALEVAE FT QREKPTWIEVDAGKMEGTFKRLPERSDLSADINEHLIVELYSK" FT misc_feature 375164..375445 FT /gene="rpsD" FT /locus_tag="VSAL_I0343" FT /note="HMMPfam hit to PF00163, Ribosomal protein S4/S9 FT N-terminal domai, score 6.2e-36" FT /inference="protein motif:HMMPfam:PF00163" FT misc_feature 375440..375514 FT /gene="rpsD" FT /locus_tag="VSAL_I0343" FT /note="PS00632 Ribosomal protein S4 signature." FT /inference="protein motif:ProSite:PS00632" FT misc_feature 375446..375589 FT /gene="rpsD" FT /locus_tag="VSAL_I0343" FT /note="HMMPfam hit to PF01479, S4 domain, score 5e-20" FT /inference="protein motif:HMMPfam:PF01479" FT CDS 375805..376794 FT /transl_table=11 FT /gene="rpoA" FT /locus_tag="VSAL_I0344" FT /old_locus_tag="TVS0154" FT /product="RNA polymerase alpha-subunit" FT /db_xref="GOA:B6EPU9" FT /db_xref="InterPro:IPR009025" FT /db_xref="InterPro:IPR011260" FT /db_xref="InterPro:IPR011261" FT /db_xref="InterPro:IPR011262" FT /db_xref="InterPro:IPR011263" FT /db_xref="InterPro:IPR011773" FT /db_xref="UniProtKB/Swiss-Prot:B6EPU9" FT /protein_id="CAQ78029.1" FT /translation="MQGSVTEFLKPRLVDIEQVSLTHAKVTLEPLERGFGHTLGNALRR FT ILLSSMPGCAVTEVEIEGVLHEYSTKEGVQEDILEILLNLKGLAVKVEGKDEVIITLNK FT SGAGPVVAGDITHDGDVEIANPEHVICHLTDDNAEISMRIKVERGRGYVPSTARIHTEE FT DERPIGRLLVDATYSPVDKISYAVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRAAT FT ILAEQLDAFVDLRDVRVPEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDL FT VQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIAED" FT misc_feature 375877..376503 FT /gene="rpoA" FT /locus_tag="VSAL_I0344" FT /note="HMMPfam hit to PF01193, RNA polymerase Rpb3/Rpb11 FT dimerisation, score 8.2e-22" FT /inference="protein motif:HMMPfam:PF01193" FT misc_feature 375979..376338 FT /gene="rpoA" FT /locus_tag="VSAL_I0344" FT /note="HMMPfam hit to PF01000, RNA polymerase Rpb3/RpoA FT insert domain, score 8.4e-59" FT /inference="protein motif:HMMPfam:PF01000" FT misc_feature 376528..376731 FT /gene="rpoA" FT /locus_tag="VSAL_I0344" FT /note="HMMPfam hit to PF03118, Bacterial RNA FT polymerase,alpha chain C, score 9.8e-36" FT /inference="protein motif:HMMPfam:PF03118" FT CDS 376831..377211 FT /transl_table=11 FT /gene="rplQ" FT /locus_tag="VSAL_I0345" FT /old_locus_tag="TVS0155" FT /product="50S ribosomal protein L17" FT /db_xref="GOA:B6EPV0" FT /db_xref="InterPro:IPR000456" FT /db_xref="UniProtKB/Swiss-Prot:B6EPV0" FT /protein_id="CAQ78030.1" FT /translation="MRHRKSGRQLNRNSSHRKAMFSNMACSLVRHEIIKTTVPKAKELR FT RVVEPLITLAKTDSVANRRLAFARTRDNEVVAKLFTELGPRFAQRAGGYTRILKCGFRT FT GDKAPMAYIELVDRPEVEAAAE" FT misc_feature 376888..377178 FT /gene="rplQ" FT /locus_tag="VSAL_I0345" FT /note="HMMPfam hit to PF01196, Ribosomal protein L17,score FT 1.4e-62" FT /inference="protein motif:HMMPfam:PF01196" FT misc_feature 376930..376998 FT /gene="rplQ" FT /locus_tag="VSAL_I0345" FT /note="PS01167 Ribosomal protein L17 signature." FT /inference="protein motif:ProSite:PS01167" FT CDS complement(377275..378285) FT /transl_table=11 FT /gene="fbp" FT /locus_tag="VSAL_I0346" FT /old_locus_tag="TVS0156" FT /product="fructose-1,6-bisphosphatase" FT /EC_number="3.1.3.11" FT /db_xref="GOA:B6EPV3" FT /db_xref="InterPro:IPR000146" FT /db_xref="InterPro:IPR020548" FT /db_xref="UniProtKB/Swiss-Prot:B6EPV3" FT /protein_id="CAQ78031.1" FT /translation="MSEIRTLGEFIVAKQHDFPHASGELSSLIGSIKLAAKIVNREINK FT AGLVDITGASGDENIQGEQQQKLDIYANDKFKAALENRDQVCGVASEEEDEAVAFNKEL FT NKNAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRISPIGSPATEEDFLQPGNKQVAAGY FT IIYGSSTMLVYTTGNGVHGFTYDPSLGVFCLSHEDMKIPQDGNIYSINEGNYIRFPEGV FT KQYLKYCQEIKPAENRPYTSRYIGSLVADFHRNLLKGGIYLYPSTQAYPNGKLRLLYEC FT NPMAMLIEEAGGKATSGEERILDITPTELHQRVPFFVGSINMVDKVQNFLDEWQD" FT misc_feature complement(377284..378273) FT /gene="fbp" FT /locus_tag="VSAL_I0346" FT /note="HMMPfam hit to PF00316,Fructose-1-6-bisphosphatase, FT score 5.6e-197" FT /inference="protein motif:HMMPfam:PF00316" FT misc_feature complement(377431..377469) FT /gene="fbp" FT /locus_tag="VSAL_I0346" FT /note="PS00124 Fructose-1-6-bisphosphatase active site." FT /inference="protein motif:ProSite:PS00124" FT CDS 378499..379860 FT /transl_table=11 FT /gene="mpl" FT /locus_tag="VSAL_I0347" FT /old_locus_tag="TVS0157" FT /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelat FT ligase" FT /EC_number="6.3.2.-" FT /db_xref="GOA:B6EPV4" FT /db_xref="InterPro:IPR000713" FT /db_xref="InterPro:IPR004101" FT /db_xref="InterPro:IPR005757" FT /db_xref="InterPro:IPR013221" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EPV4" FT /protein_id="CAQ78032.1" FT /translation="MHIHILGICGTFMGGAATLARQLGHKVTGSDANVYPPMSTLLESQ FT GIEIIEGFDPSQLDPAPDLVVIGNAMSRGNPCVEYVLDKNLKYTSGPQWLQEFLLQDRW FT VLAVAGTHGKTTTSSMLAWVLEECGYKPGFLVGGVLGNFGESARLGESMFFVVEADEYD FT SAFFDKRSKFVHYRPRTLVLNNLEFDHADIFDDLAAIQRQFHHLIRTVPSSGRIFAPKQ FT DKPLAEVLEQGCWSEIEFTGEEGEWKASKLKKDGSQFDVYFNDENVGQVNWNLVGDHNV FT SNALMVVASARHVGVTPDLACEALGSFINTKRRLEFKGEVNGVTVYDDFAHHPTAIDLT FT LSGLRNKVGDNKIIAVLEPRSSTMKLGVHKDTLAGSLHAADSVYLFQPDNISWSVDDVA FT KQCVQPAYTHHEINAFVDMIVAEAKEGDQILVMSNGGFEGIHGKLLSALEQKAI" FT sig_peptide 378499..378558 FT /gene="mpl" FT /locus_tag="VSAL_I0347" FT misc_feature 378502..378807 FT /gene="mpl" FT /locus_tag="VSAL_I0347" FT /note="HMMPfam hit to PF01225, Mur ligase family,catalytic FT domain, score 2e-30" FT /inference="protein motif:HMMPfam:PF01225" FT misc_feature 378814..379371 FT /gene="mpl" FT /locus_tag="VSAL_I0347" FT /note="HMMPfam hit to PF08245, Mur ligase middle FT domain,score 1e-18" FT /inference="protein motif:HMMPfam:PF08245" FT misc_feature 379429..379671 FT /gene="mpl" FT /locus_tag="VSAL_I0347" FT /note="HMMPfam hit to PF02875, Mur ligase family,glutamate FT ligase doma, score 1.4e-08" FT /inference="protein motif:HMMPfam:PF02875" FT CDS 379862..380491 FT /transl_table=11 FT /locus_tag="VSAL_I0348" FT /old_locus_tag="TVS0158" FT /product="probable aromatic acid decarboxylase" FT /EC_number="4.1.1.-" FT /db_xref="GOA:B6EPV5" FT /db_xref="InterPro:IPR003382" FT /db_xref="InterPro:IPR004507" FT /db_xref="UniProtKB/TrEMBL:B6EPV5" FT /protein_id="CAQ78033.1" FT /translation="MYKKQKTITLAMTGASGAPYGLRLLECLLAADYQVYFLISSAARV FT VMVTEHNLKLPSGPDAMKAVLVEHLGCDADKLIVCGKEDWFSPVASGSAAPKQMVVCPC FT SAGSVASIAHGISDNLIERAADVVLKERGQLIMVVRETPFSTLHLENMLKLSQMGTTIM FT PAAPGFYHQPKSIEDLIDFMVARILDHLGVEQGLVPRWGYDQRQKS" FT sig_peptide 379862..379912 FT /locus_tag="VSAL_I0348" FT misc_feature 379877..380281 FT /locus_tag="VSAL_I0348" FT /note="HMMPfam hit to PF02441, Flavoprotein, score 1.3e-22" FT /inference="protein motif:HMMPfam:PF02441" FT misc_RNA 380531..380644 FT /locus_tag="VSAL_I3106s" FT /product="TPP riboswitch (THI element)" FT /note="TPP riboswitch (THI element) (RF00059) predicted by FT Rfam, score 68.34" FT CDS 380696..381712 FT /transl_table=11 FT /gene="tbpA" FT /locus_tag="VSAL_I0349" FT /old_locus_tag="TVS0159" FT /product="thiamine-binding periplasmic protein precursor" FT /db_xref="GOA:B6EPV6" FT /db_xref="InterPro:IPR005948" FT /db_xref="InterPro:IPR005967" FT /db_xref="InterPro:IPR006059" FT /db_xref="UniProtKB/TrEMBL:B6EPV6" FT /protein_id="CAQ78034.1" FT /translation="MKTRYISPLLKTLPIALAVSSLSSFSASASETLTVYTYDSFAADW FT GPGPTIKAAFEKQCGCNLDLVALDDGVSILNRLRLEGSNSKADIVLGLDNNLMAEAKVT FT GLLAEHNVNTDSVTIPNGWNDKTFVPYDYGYFAFVYNKEKVKNPPKSLKELVEQRDDLT FT VIYQDPRTSTPGQGLLLWMKSVYGDDVAQAWKQLAKKTVTVTKGWSEAYSMFLEGESDL FT VLSYTTSPAYHSLAEKDDRFAAANFSEGHYMQVEVAAKVKNTQHNALTDEFLAFILSKE FT FQSAMPTGNWMYPVTNITLPKGFEDLKVPTKALSFSSAEIAKQRKLWIREWQHALIF" FT sig_peptide 380696..380782 FT /gene="tbpA" FT /locus_tag="VSAL_I0349" FT misc_feature 380726..381547 FT /gene="tbpA" FT /locus_tag="VSAL_I0349" FT /note="HMMPfam hit to PF01547, Bacterial extracellular FT solute-binding prot, score 0.00062" FT /inference="protein motif:HMMPfam:PF01547" FT CDS 381775..383397 FT /transl_table=11 FT /gene="thiP" FT /locus_tag="VSAL_I0350" FT /old_locus_tag="TVS0160" FT /product="thiamine transport system permease protein ThiP" FT /db_xref="GOA:B6EPV1" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR005947" FT /db_xref="UniProtKB/TrEMBL:B6EPV1" FT /protein_id="CAQ78035.1" FT /translation="MKTNPLNSIPYIGYMIATVIVIFVGGAIGALLIASPSINVSLIWS FT DPYYIHITKFSFYQATLSTLFSVVLAVPTAYALSRRSFLGRGLLLKLCATTLVLPVLVG FT VFGLLAIYGNSGLLAKVFAFFGGKLPFSIYGLNGILLAHVFFNYPFATRLFLQSLDSIP FT MEQHQLSAHLGLTGWNKFNVVAWPRVKQQFPHVAGLVFMLCFTSFATVMALGGGPKSTT FT IELAIYQAIKFDFDLQAGAILALWQMLLCAGLSLCIQRFSTSIAVDSATLGKPIIYQDS FT KRQKLWDKGWIILLTLFILPPLLMVVISGINSEVITVMTSSAFWSAFANSFIVAFCAAL FT LAMVFGVLLLHTTRALRLNHQRFLADKLDLIGTMILVTPGLVISTGLFLLLRNITDVFS FT MAIWIVILVNALMALPYVIKTLAQPLLHMAQQYQLLCASLGLNGFTRFRLIEWRGLRKP FT MAHAFAFAFAIAFILSMGDLSAIALFGSQDFRTLPLYLFQLLGSYQMEAAAVVSLCLLL FT LSVGVFSTVEWLFSSKNLQRENV" FT misc_feature order(381808..381876,381943..382011,382048..382116, FT 382159..382227,382351..382419,382477..382545, FT 382642..382710,382753..382821,382882..382950, FT 382963..383028,383161..383229,383296..383364) FT /gene="thiP" FT /locus_tag="VSAL_I0350" FT misc_feature 381919..382575 FT /gene="thiP" FT /locus_tag="VSAL_I0350" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 0.002" FT /inference="protein motif:HMMPfam:PF00528" FT misc_feature 382744..383370 FT /gene="thiP" FT /locus_tag="VSAL_I0350" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 0.0049" FT /inference="protein motif:HMMPfam:PF00528" FT CDS 383397..384071 FT /transl_table=11 FT /gene="thiQ" FT /locus_tag="VSAL_I0351" FT /old_locus_tag="TVS0161" FT /product="thiamine transport ATP-binding protein ThiQ" FT /db_xref="GOA:B6EPV2" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR005968" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EPV2" FT /protein_id="CAQ78036.1" FT /translation="MLTFSNVKYRYHSEVFEFDMSVKQGEVVAILGPSGAGKSTLLSLL FT AGFINPELGDIVINGHSVLSLAPHQRPLSMLFQEHNLFAHLSIADNIGLGIKANLRLND FT EEKERVIYAAQQVGVDELLLRLPEQLSGGQKQRVALARCLVHNKPVLLLDEPFSALDPM FT LREEMIVLIRTLIKTQQLTVLMVTHSLQDAKELASGYAFVCHHKILSYGKMSEIMTQDT FT PP" FT misc_feature 383469..384014 FT /gene="thiQ" FT /locus_tag="VSAL_I0351" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.6e-55" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature 383490..383513 FT /gene="thiQ" FT /locus_tag="VSAL_I0351" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 383784..383828 FT /gene="thiQ" FT /locus_tag="VSAL_I0351" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 384295..387204 FT /transl_table=11 FT /gene="rapA" FT /locus_tag="VSAL_I0352" FT /old_locus_tag="TVS0162" FT /product="RNA polymerase-associated protein RapA FT (ATP-dependent helicase hepA)" FT /EC_number="3.6.1.-" FT /note="Expression may be stress-induced" FT /db_xref="GOA:B6EPV7" FT /db_xref="InterPro:IPR000330" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR022737" FT /db_xref="InterPro:IPR023949" FT /db_xref="UniProtKB/Swiss-Prot:B6EPV7" FT /protein_id="CAQ78037.1" FT /translation="MSFALGQRWISDTESDLGLGTVVAVDDRTVSVLFAASEENRLYAK FT HDAPITRVTFNKGDTIESHEGWSLEVEDVIEDGGLLTYIGTRTDTDEVNVVLRETLLSH FT QIRFNKPQDKLFAGQIDRMDRFALRFRALQNQYEQHKNPMRGLCGMRAGLIPHQLFIAH FT EVGRRYAPRVLLADEVGLGKTIEAGMIIHQQVLSGRAERVLIVVPETLQHQWLVEMMRR FT FNLHFSIFDEERCIESYADSENPFDTAQLVLCSLDFIRRSKRRFEQVVEADWDLLVVDE FT AHHLEWNQTKPSRAYQVIEAIAEETAGVLLLTATPEQLGHESHFARLRLLDPDRFYDYD FT AFVEEERQYQPVADAVTALMSGDKLSNDAKNRIAELLSEQDVEPLFRIIESDGSEEQQS FT QVRQELVDNLMDRHGTGRVLFRNTRAAIKGFPQRNLNLMPMALPPQYATSMRVATMMGG FT RMSNEARAMKMLYPEEIFQEFEGDSATWWQFDPRVNWLLELLKENRNEKVLIIASRAST FT ALQLEQALREREGIRGTVFHEGMSIIERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQF FT ANQLVMFDLPFNPDLLEQRIGRLDRIGQKRDIDIHVPYLQGTSQELLARWFDEGLNAFG FT ETCPTGRAVYEKFSDTIIAILATGKSDGLEPLIEESAALNKELKAQLEQGRDRLLEVHS FT NGGNKAKELAEKIAATDGDIHLVNFALNLFDTIGLNQDDKGENAIVVTPAENMLVSSYP FT GLPYEGCTITFDRKTALSREDMNLISWEHPMIQGGIDLVLTEGVGATAVSLLKNKALPA FT GTLLLELIYVVDAQAPKKSGIGRFLPKTPIRLMMDSKGNDLSAQVEFESFNRQLSPVNR FT HMASKLVNSVQKEIHALIDTAEVSIEDRIEAVRVDANAEMKTALNGELDRLQALKAVNP FT NIRDEELTQIETQMSELSAYIGKAQVQLDSLRLIVVSHN" FT misc_feature 384745..385248 FT /gene="rapA" FT /locus_tag="VSAL_I0352" FT /note="HMMPfam hit to PF04851, Type III restriction enzyme, FT res subunit, score 9.8e-06" FT /inference="protein motif:HMMPfam:PF04851" FT misc_feature 384763..385662 FT /gene="rapA" FT /locus_tag="VSAL_I0352" FT /note="HMMPfam hit to PF00176, SNF2 family N-terminal FT domain, score 9.2e-48" FT /inference="protein motif:HMMPfam:PF00176" FT misc_feature 385867..386103 FT /gene="rapA" FT /locus_tag="VSAL_I0352" FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 8.7e-16" FT /inference="protein motif:HMMPfam:PF00271" FT misc_feature 386254..386277 FT /gene="rapA" FT /locus_tag="VSAL_I0352" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 387207..387941 FT /transl_table=11 FT /gene="rluA" FT /locus_tag="VSAL_I0353" FT /old_locus_tag="TVS0163" FT /product="ribosomal large subunit pseudouridine synthase A" FT /EC_number="5.4.99.-" FT /db_xref="GOA:B6EPV8" FT /db_xref="InterPro:IPR006145" FT /db_xref="InterPro:IPR006224" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/TrEMBL:B6EPV8" FT /protein_id="CAQ78038.1" FT /translation="MAMLEYNPPMEPLDIVYQDEAILAVNKPAGLLSNPGRAPEHYDSV FT WSRVVAEFPDAQLVHRLDMSTSGLMIFALYKEAERHIKKQFQYRLTHKVYYARVWGNVE FT KVEGQIDLPLICDWPNRPRQKVCYEHGKSSQTGYEVIQVEEKTTLVRLLPITGRSHQLR FT VHMMEEGHEIVGDEFYASKEALAFSDRLQLHSAELSFYHPETDKFISLFAPCAFYPEAQ FT AGVLDAMDIAPVRPDYKTLPKQ" FT misc_feature 387267..387710 FT /gene="rluA" FT /locus_tag="VSAL_I0353" FT /note="HMMPfam hit to PF00849, RNA pseudouridylate FT synthase, score 1.9e-44" FT /inference="protein motif:HMMPfam:PF00849" FT misc_feature 387381..387425 FT /gene="rluA" FT /locus_tag="VSAL_I0353" FT /note="PS01129 Rlu family of pseudouridine synthase FT signature." FT /inference="protein motif:ProSite:PS01129" FT CDS complement(388002..388439) FT /transl_table=11 FT /gene="uspF" FT /locus_tag="VSAL_I0354" FT /old_locus_tag="TVS0164" FT /product="universal stress protein F" FT /db_xref="GOA:B6EL34" FT /db_xref="InterPro:IPR006015" FT /db_xref="InterPro:IPR006016" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:B6EL34" FT /protein_id="CAQ78039.1" FT /translation="MYKQILVPVDLNDKGFADKAVEMAVWHAKHSNAELHLLNVLPGIH FT MSMVSTYFPKGAAKQMKEDVSKQLNEFAAKFVDDDVVYRVHVAEGKPYVTILDYAERLG FT ADLIVMPSHKRSKIDKVMLGSVASKVVENSPINVMVVKPQG" FT misc_feature complement(388014..388439) FT /gene="uspF" FT /locus_tag="VSAL_I0354" FT /note="HMMPfam hit to PF00582, Universal stress protein FT family, score 2.4e-20" FT /inference="protein motif:HMMPfam:PF00582" FT CDS complement(388495..391074) FT /transl_table=11 FT /locus_tag="VSAL_I0355" FT /old_locus_tag="TVS0165" FT /product="integral membrane transport protein" FT /db_xref="InterPro:IPR010656" FT /db_xref="InterPro:IPR011853" FT /db_xref="InterPro:IPR021814" FT /db_xref="UniProtKB/TrEMBL:B6EL35" FT /protein_id="CAQ78040.1" FT /translation="MTQSSNTSQDVQEMVAQSDTGARSPEGLSGRILWFVPLCWSLFQL FT WYASPLPFIFNFGILNDTEARSVHLAFAIFLAFTAYPALKNSPRDRIPVIDWILAFAGS FT FSAAYIYIFYTQLAERSGAPTTPDIIASVVGMVLLLEATRRALGPPLMVVAAVFLLYTF FT AGPHMPDVIAHKGASLNKAMSHLWLTTEGVFGVALGVSTSFVFLFVLFGAMLEKAGAGA FT YFIKVAFSLLGHMKGGPAKAAVVASGLSGLVSGSSIANVVTTGTFTIPLMKRVGFSGEK FT AGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYVEVIKAALLPALISYIALLYIVHLE FT ACKAGMKGLPRRHTPTLVHSLLSFTGTILGLCVLSAAVYYGIGWTKDVFGDAATPIVTV FT ALLLSYVGLTSISAKYQEHAMMAIDEELTEVPDPGPTIKSGLHFLLPIVVLVWCLTVER FT FSPGLSAFWASVFMIFILLTQRPLIGFFTKEGTLVNQVKQGVDDLLESLVSGARNMIGI FT GVATAAAGIVVGVVTLTGIGLVMTDFVEFISGGSIILMLLFTAVISLILGMGLPTTANY FT IVVSTLMAPVIVTLGAAHGLIIPLIAVHLFVFYFGILADDTPPVGLAAFAAAAIAKSDP FT IRTGIQGFTYDIRTAILPFMFVFNTQLLLMGIDSWWHLALTIISSIIAMLTFSAATQGW FT WFTKTKWWEVVLLLLITFSLFRPGFWWDQIYPAKDYYQGIEIAQLAEELNVGQSLTLEV FT SGENLEGNIVSKTVRLPFDDRAVTGEERVSSMGLMLSKVDNKMIVDMVEFGSPAEASGI FT DFDWEITNVVLDAERPLKEWVFIPTLLLLFALGFNQRRRAKKENLAA" FT misc_feature complement(order(388915..388974,389002..389070, FT 389083..389151,389194..389262,389281..389349, FT 389377..389445,389458..389526,389623..389691, FT 389842..389910,389938..390006,390064..390132, FT 390274..390342,390430..390498,390580..390639, FT 390736..390795,390823..390876,390895..390963)) FT /locus_tag="VSAL_I0355" FT misc_feature complement(389059..390675) FT /locus_tag="VSAL_I0355" FT /note="HMMPfam hit to PF06808, DctM-like transporters,score FT 5.2e-77" FT /inference="protein motif:HMMPfam:PF06808" FT CDS complement(391308..392282) FT /transl_table=11 FT /locus_tag="VSAL_I0356" FT /old_locus_tag="TVS0166" FT /product="putative exported protein" FT /db_xref="InterPro:IPR011852" FT /db_xref="InterPro:IPR015168" FT /db_xref="UniProtKB/TrEMBL:B6EL36" FT /protein_id="CAQ78041.1" FT /translation="MALKNLIKVSAVAAAMLGAGMGTASAQEFITIGTGSVTGVYYPTG FT GAICKLVNKDRKEHNVRCSVESTGGSIYNVNTIRSGELDFGIVQSDWQYHGYNGTSKFE FT AQGPYKKLRAMFSLHTEPFNIIARSDSGINDVSDLAGKRVNIGNPGSGDRATMGVVMNA FT MGWTNDSFKLASELKSSELSQALCDNKIDAFIYMVGHPNGSIKEATTSCDAKLVPATGP FT KIDKIVADNPYYAYTTVPASMYRGTEGDVNSFGVAATVVTTSDVSDEVAYSVAKAVFEN FT FNTFKRLHPAFATLKKEDMVKAGISIPLHPGAVKYYKEVGLLK" FT sig_peptide complement(392205..392282) FT /locus_tag="VSAL_I0356" FT repeat_region 392617..394027 FT /note="VSa1" FT repeat_region 392617..392635 FT /note="IR of VSa1" FT CDS join(392708..393397,393397..394014) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0357" FT /old_locus_tag="TVS0167" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella oneidensis issod7,transposase. FT UniProt:Q8CM19 (EMBL:AE014299) (440 aa) fasta scores: FT E()=8.1e-88, 48.409% id in 440 aa. CDS contains a FT frameshift after codon 230" FT /db_xref="PSEUDO:CAQ78042.1" FT /inference="similar to sequence:UniProt:Q8CM19" FT misc_feature 393086..393744 FT /locus_tag="VSAL_I0357" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 7.6e-28" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 394009..394027 FT /note="IR of VSa1" FT CDS complement(394047..394517) FT /transl_table=11 FT /gene="argR" FT /locus_tag="VSAL_I0358" FT /old_locus_tag="TVS0168" FT /product="arginine repressor" FT /db_xref="GOA:B6EL38" FT /db_xref="InterPro:IPR001669" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR020899" FT /db_xref="InterPro:IPR020900" FT /db_xref="UniProtKB/TrEMBL:B6EL38" FT /protein_id="CAQ78043.1" FT /translation="MRNNEKQERLVKEFKSILKAERFGSQGEIVDALRISGFDNINQSK FT VSRMLTKFGAVRTRNAKMEMVYCLPIELGVPTVSSSLRELVMDVDYNSALVVIHTGPGA FT AQLIARLLDSLGKAEGILGVVAGDDTIFITPTRNIEIKTLFDSVCDLFEYSI" FT misc_feature complement(394065..394277) FT /gene="argR" FT /locus_tag="VSAL_I0358" FT /note="HMMPfam hit to PF02863, Arginine FT repressor,C-terminal domain, score 4.3e-21" FT /inference="protein motif:HMMPfam:PF02863" FT misc_feature complement(394293..394505) FT /gene="argR" FT /locus_tag="VSAL_I0358" FT /note="HMMPfam hit to PF01316, Arginine repressor, DNA FT binding domai, score 6e-26" FT /inference="protein motif:HMMPfam:PF01316" FT CDS 394789..395724 FT /transl_table=11 FT /gene="mdh" FT /locus_tag="VSAL_I0359" FT /old_locus_tag="TVS0169" FT /product="malate dehydrogenase" FT /EC_number="1.1.1.37" FT /db_xref="GOA:B6EL39" FT /db_xref="InterPro:IPR001236" FT /db_xref="InterPro:IPR001252" FT /db_xref="InterPro:IPR001557" FT /db_xref="InterPro:IPR010097" FT /db_xref="InterPro:IPR015955" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR022383" FT /db_xref="InterPro:IPR023958" FT /db_xref="UniProtKB/Swiss-Prot:B6EL39" FT /experiment="The expressed protein is found to be exported FT (extracellular) by Aliivibrio salmonicida" FT /protein_id="CAQ78044.1" FT /translation="MKVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAAD FT LSHIPTPVSIKGYCGEDPTPALEGADVVLISAGVARKPGMDRSDLFNINAGIVKSLAEK FT IAVTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVAELKG FT KNPGEICVPVIGGHSGVTILPLLSQVEGVEFTAEEVAALTPRIQNAGTEVVEAKAGGGS FT ATLSMGQAACRFGLSLVKALSGEKGVVECAYVEGNGEHARFFAQPILLGKNGVEEIQHY FT GELSTFEQDALDSMLDTLKADIKIGEEFIK" FT misc_feature 394789..395223 FT /gene="mdh" FT /locus_tag="VSAL_I0359" FT /note="HMMPfam hit to PF00056, lactate/malate FT dehydrogenase, NAD binding do, score 3.3e-72" FT /inference="protein motif:HMMPfam:PF00056" FT sig_peptide 394789..394839 FT /gene="mdh" FT /locus_tag="VSAL_I0359" FT misc_feature 395224..395262 FT /gene="mdh" FT /locus_tag="VSAL_I0359" FT /note="PS00068 Malate dehydrogenase active site signature." FT /inference="protein motif:ProSite:PS00068" FT misc_feature 395227..395718 FT /gene="mdh" FT /locus_tag="VSAL_I0359" FT /note="HMMPfam hit to PF02866, lactate/malate FT dehydrogenase, alpha/beta C-t, score 9.8e-70" FT /inference="protein motif:HMMPfam:PF02866" FT CDS complement(395817..396788) FT /transl_table=11 FT /gene="ispB" FT /locus_tag="VSAL_I0360" FT /old_locus_tag="TVS0170" FT /product="octaprenyl-diphosphate synthase" FT /EC_number="2.5.1.-" FT /db_xref="GOA:B6EL40" FT /db_xref="InterPro:IPR000092" FT /db_xref="InterPro:IPR008949" FT /db_xref="InterPro:IPR017446" FT /db_xref="UniProtKB/TrEMBL:B6EL40" FT /protein_id="CAQ78045.1" FT /translation="MDFKAIQALTADDMAIVNETILAQLNSDVALINQLGFYIVSGGGK FT RLRPVLAILSAKALGYEGKDHTMAAAFIEFIHTATLLHDDVVDESDMRRGKATANAEFG FT NAASVLVGDFIYTRSFQMMTSLGSIKILSLMSESVNVIAEGEVLQLMNCNDPNTTEESY FT MQVIYSKTARLFEAATQIGAILNNASQEIETALQNYGKYLGTAFQLIDDVMDYTSDGED FT MGKNVGDDLAEGKPTLPLLHAMNNGNAEQAAMIRHAIEQGNGLDKLDPILACMKEVGSL FT EYTKQKADEEADKAIAELSIIPESEYKEALKALAHLAVKRSK" FT misc_feature complement(395934..396698) FT /gene="ispB" FT /locus_tag="VSAL_I0360" FT /note="HMMPfam hit to PF00348, Polyprenyl synthetase,score FT 4.6e-106" FT /inference="protein motif:HMMPfam:PF00348" FT misc_feature complement(396144..396182) FT /gene="ispB" FT /locus_tag="VSAL_I0360" FT /note="PS00444 Polyprenyl synthetases signature 2." FT /inference="protein motif:ProSite:PS00444" FT misc_feature complement(396504..396548) FT /gene="ispB" FT /locus_tag="VSAL_I0360" FT /note="PS00723 Polyprenyl synthetases signature 1." FT /inference="protein motif:ProSite:PS00723" FT CDS 397065..397376 FT /transl_table=11 FT /gene="rplU" FT /locus_tag="VSAL_I0361" FT /old_locus_tag="TVS0171" FT /product="50S ribosomal protein L21" FT /db_xref="GOA:B6EL41" FT /db_xref="InterPro:IPR001787" FT /db_xref="InterPro:IPR018258" FT /db_xref="UniProtKB/Swiss-Prot:B6EL41" FT /protein_id="CAQ78046.1" FT /translation="MYAVFQSGGKQHRVSEGQTLRLEKLDVETGATVDFDNVLMIANGE FT EITVGAPLVAGGKVTAEVVQHGRGDKVKIVKFRRRKHSRKQQGHRQWFTEVRITGISA" FT misc_feature 397065..397352 FT /gene="rplU" FT /locus_tag="VSAL_I0361" FT /note="HMMPfam hit to PF00829, Ribosomal prokaryotic L21 FT protein, score 1.8e-59" FT /inference="protein motif:HMMPfam:PF00829" FT misc_feature 397278..397346 FT /gene="rplU" FT /locus_tag="VSAL_I0361" FT /note="PS01169 Ribosomal protein L21 signature." FT /inference="protein motif:ProSite:PS01169" FT CDS 397394..397651 FT /transl_table=11 FT /gene="rpmA" FT /locus_tag="VSAL_I0362" FT /old_locus_tag="TVS0172" FT /product="50S ribosomal protein L27" FT /db_xref="GOA:B6EL42" FT /db_xref="InterPro:IPR001684" FT /db_xref="InterPro:IPR018261" FT /db_xref="UniProtKB/Swiss-Prot:B6EL42" FT /protein_id="CAQ78047.1" FT /translation="MAHKKAGGSTRNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKF FT HAGTNVGIGKDHTLFALSEGKVKFEVKGPKNRKFVSIDAE" FT misc_feature 397397..397642 FT /gene="rpmA" FT /locus_tag="VSAL_I0362" FT /note="HMMPfam hit to PF01016, Ribosomal L27 protein,score FT 1.2e-56" FT /inference="protein motif:HMMPfam:PF01016" FT misc_feature 397493..397537 FT /gene="rpmA" FT /locus_tag="VSAL_I0362" FT /note="PS00831 Ribosomal protein L27 signature." FT /inference="protein motif:ProSite:PS00831" FT CDS 397929..399107 FT /transl_table=11 FT /locus_tag="VSAL_I0363" FT /old_locus_tag="TVS0173" FT /product="putative GTP-binding protein" FT /db_xref="GOA:B6EL43" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR006074" FT /db_xref="InterPro:IPR006169" FT /db_xref="InterPro:IPR014100" FT /db_xref="UniProtKB/Swiss-Prot:B6EL43" FT /protein_id="CAQ78048.1" FT /translation="MKFVDEATIKVDAGDGGNGTVSFWREKFVAKGGPDGGDGGDGGDV FT YLEADENLNTLIDYRFNRFYDAERGKNGGGTNSTGRRGEDITLKVPVGTRAIDIDTGEK FT VAELMAHGMKIMVAKGGWHGLGNTRFKSSVNRAPRQKTMGTKGEVRELRLELLLLADVG FT MLGLPNAGKSTFIRAVSAAKPKVADYPFTTLIPSLGVVRARGNKSFVIADIPGLIEGAA FT EGAGLGVRFLKHLERCRVLLHVIDILPIDGSDPVQNALTIIDELERYSEKVAGKPRWLL FT FNKTDLLLEAEADEKIAEILEALAWEGAHFKIAAVSRTGTQEVCNELSDFMDTLPKEIM FT TDEEKAALKVDFMWDDYHKDAMSGKNVVTEDGDDDDDWDDEEDDGHVIYARD" FT misc_feature 397935..398402 FT /locus_tag="VSAL_I0363" FT /note="HMMPfam hit to PF01018, GTP1/OBG, score 2.1e-82" FT /inference="protein motif:HMMPfam:PF01018" FT misc_feature 398406..398786 FT /locus_tag="VSAL_I0363" FT /note="HMMPfam hit to PF01926, GTPase of unknown FT function,score 1.9e-37" FT /inference="protein motif:HMMPfam:PF01926" FT misc_feature 398424..398447 FT /locus_tag="VSAL_I0363" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 398565..398606 FT /locus_tag="VSAL_I0363" FT /note="PS00905 GTP1/OBG family signature." FT /inference="protein motif:ProSite:PS00905" FT CDS 399220..399999 FT /transl_table=11 FT /locus_tag="VSAL_I0364" FT /old_locus_tag="TVS0174" FT /product="membrane protein" FT /db_xref="InterPro:IPR010619" FT /db_xref="UniProtKB/TrEMBL:B6EL44" FT /protein_id="CAQ78049.1" FT /translation="MRIQMEEQQREISRLVAKAGQMLLQHGAESSLVSDVSRRLGIAVG FT ADEVEISLSASSLVITTVINEHCVTTARRAPDRGINMRAITEIQRICIMSEKGLLDRHE FT ATHKLNNISPERYNRWLVVVMIGLSCASFSRLAGGDWPVFMMTFLASSLGMIVRQEIGH FT RHFNPLLNFGITAFVTTLISSQAVIYHIGNTPFLAMASSVLMLVPGFPLINAVADMVKG FT YVNMGIARWTFATLLTLATSIGIVGAMNLVGVWGWIN" FT misc_feature 399274..399846 FT /locus_tag="VSAL_I0364" FT /note="HMMPfam hit to PF06738, Protein of unknown function FT (DUF1212), score 7.6e-63" FT /inference="protein motif:HMMPfam:PF06738" FT misc_feature order(399577..399636,399646..399705,399724..399792, FT 399802..399870,399925..399993) FT /locus_tag="VSAL_I0364" FT CDS 399999..400490 FT /transl_table=11 FT /locus_tag="VSAL_I0365" FT /old_locus_tag="TVS0175" FT /product="membrane protein" FT /db_xref="InterPro:IPR024528" FT /db_xref="UniProtKB/TrEMBL:B6EL45" FT /protein_id="CAQ78050.1" FT /translation="MDNVTMQSIFELFLALLNDMFFAMIPAIGFALVFNVPVKALKYCA FT IGGAIGHGTRFLLMHYGAPLEWATLCAATVVGMIGVHWSHRFLAHPKVFTVAALIPMIP FT GVFAFKAMIAVVEINHLGYSPELWALMIDNLIKTLFTIAALAIGLAMPGLLFYRRKSIV FT " FT misc_feature order(400032..400100,400182..400250,400275..400343, FT 400401..400469) FT /locus_tag="VSAL_I0365" FT CDS 400556..401077 FT /transl_table=11 FT /gene="folA" FT /locus_tag="VSAL_I0366" FT /old_locus_tag="TVS0176" FT /product="dihydrofolate reductase type 3" FT /EC_number="1.5.1.3" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EL46" FT /db_xref="InterPro:IPR001796" FT /db_xref="InterPro:IPR012259" FT /db_xref="InterPro:IPR024072" FT /db_xref="UniProtKB/TrEMBL:B6EL46" FT /protein_id="CAQ78051.1" FT /translation="MKISMIAAMANNGKIDKSCNLSNSQSRIIGKNNQMPWHLPADFAW FT FKQCTMGKPIVMGRKTYESIGRPLPGRLNIVLSRDASLKIEGVTCVTSIDEAKQVAGDI FT EELMIIGGGSIYQACLPDADTLYLTFIDADIDGDTQFPDWGEGWNQTHSEMYLKDEKNQ FT YDMEFVVLER" FT misc_feature 400559..401074 FT /gene="folA" FT /locus_tag="VSAL_I0366" FT /note="HMMPfam hit to PF00186, Dihydrofolate FT reductase,score 4.8e-52" FT /inference="protein motif:HMMPfam:PF00186" FT CDS complement(401288..402109) FT /transl_table=11 FT /gene="apaH" FT /locus_tag="VSAL_I0367" FT /old_locus_tag="TVS0177" FT /product="bis(5'nucleosyl)-tetraphosphatase" FT /EC_number="3.6.1.41" FT /db_xref="GOA:B6EL47" FT /db_xref="InterPro:IPR004617" FT /db_xref="InterPro:IPR004843" FT /db_xref="UniProtKB/Swiss-Prot:B6EL47" FT /protein_id="CAQ78052.1" FT /translation="MATYFVGDIQGCLDELLLLLDQVSFDKEKDQLWLTGDLVARGPKS FT LETLRFVKSLDKAAVTILGNHDLHLLAVSQGISRIKEKDKTASIFTAPDSEELLTWLRH FT QPLLATHAQHNIVMTHAGISPQWNIETATECAREIESVLVSDKWVWLLENMYENQPDLW FT QSDLTGINRYRYIINAFTRMRFCYPDGRLDMECKQPPQELSSDDKEKLIPWFDLKSRCP FT LSHTVIFGHWAALMGYENNGVIALDTGCVWGEYMTMYRVDDGQYFTQKAIS" FT misc_feature complement(401405..402109) FT /gene="apaH" FT /locus_tag="VSAL_I0367" FT /note="HMMPfam hit to PF00149, Calcineurin-like FT phosphoesterase, score 1.5e-15" FT /inference="protein motif:HMMPfam:PF00149" FT CDS complement(402206..403039) FT /transl_table=11 FT /gene="ksgA" FT /locus_tag="VSAL_I0368" FT /old_locus_tag="TVS0178" FT /product="dimethyladenosine transferase" FT /EC_number="2.1.1.-" FT /db_xref="GOA:B6EL48" FT /db_xref="InterPro:IPR001737" FT /db_xref="InterPro:IPR011530" FT /db_xref="InterPro:IPR020596" FT /db_xref="InterPro:IPR020598" FT /db_xref="InterPro:IPR023165" FT /db_xref="UniProtKB/Swiss-Prot:B6EL48" FT /protein_id="CAQ78053.1" FT /translation="MSTRNDVHLGHKAKKRFGQNFLNDPYVIDGIVSAINPLPGQNLVE FT IGPGLGAITEPVGREIDKFTVIELDRDLAARLRTHPELGSKLTIYEGDAMRFDFTQLIQ FT EGNKLRIFGNLPYNISTPLMFHLFEFHKDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTV FT MAQYYCKVMPVLEVPPTAFVPPPKVDSAVVRLVPYEVLPFPAKNLKWLDRVCREGFNQR FT RKTVRNCFKALLTKEQLEALGVNPSHRPENLTLEQFVIMANWLNDNYQAESTESA" FT misc_feature complement(402239..403012) FT /gene="ksgA" FT /locus_tag="VSAL_I0368" FT /note="HMMPfam hit to PF00398, Ribosomal RNA adenine FT dimethylase, score 1.1e-96" FT /inference="protein motif:HMMPfam:PF00398" FT CDS complement(403036..404025) FT /transl_table=11 FT /gene="pdxA" FT /locus_tag="VSAL_I0369" FT /old_locus_tag="TVS0179" FT /product="4-hydroxythreonine-4-phosphate dehydrogenase" FT /EC_number="1.1.1.262" FT /db_xref="GOA:B6EL49" FT /db_xref="InterPro:IPR005255" FT /db_xref="UniProtKB/TrEMBL:B6EL49" FT /protein_id="CAQ78054.1" FT /translation="MNNIKRIAITPGEPAGIGPDLVLSIAQQDWPHQLVICGNRTALEQ FT RAKQLKLSINIENYDVNTPAKSHRAGTLIVDNIELGIDVIAGELNEANGHYVLETLTRA FT AQGNMDGEFDAVVTGPVHKGVINRAGVAFSGHTEFFAELSNTQQVVMMLATEGLRVALV FT TTHIPLAYVAKAITDDRLKQVIRILHQDLITKFGITNPAIFVCGLNPHAGEDGCLGREE FT IDIITPALNDLREKESMNLIGPLPADTLFQDKYLQEADAVLAMYHDQGLPVLKFKGFGK FT SVNITLGLPFIRTSVDHGTALELAGTGKADAGSFITALTHAIELVENK" FT misc_feature complement(403057..403953) FT /gene="pdxA" FT /locus_tag="VSAL_I0369" FT /note="HMMPfam hit to PF04166, Pyridoxal phosphate FT biosynthetic protein Pdx, score 1.6e-161" FT /inference="protein motif:HMMPfam:PF04166" FT CDS complement(404018..405328) FT /transl_table=11 FT /gene="surA" FT /locus_tag="VSAL_I0370" FT /old_locus_tag="TVS0180" FT /product="chaperone SurA precursor" FT /EC_number="5.2.1.8" FT /db_xref="GOA:B6EL50" FT /db_xref="InterPro:IPR000297" FT /db_xref="InterPro:IPR008880" FT /db_xref="InterPro:IPR015391" FT /db_xref="InterPro:IPR023034" FT /db_xref="UniProtKB/TrEMBL:B6EL50" FT /protein_id="CAQ78055.1" FT /translation="MKNWKIPFISSLLLMLTINVHAAPVELDRVIAIVDEGVVLQSDIE FT TSLKTVKINAQEKGQPLPEENVLREQVLEKLILDTIQSQQAEKMGIRIDDTRLEEALNN FT IAKDNKMTLAQLQQKAASQGLAYADFREQIRKEIAASEARNAQVRRRINILPQEVESLA FT LLLSEETQATVQYKISHIQLRTDGATQAEKEALEKQALELTERLKQGADFATMAYTYSK FT GPKALQGGDWGWMRKEEMPTIFADQITGQGKSSIIGPFRSGVGFHIIKIDDVKGLETVA FT VTEVNARHILVKTSVIMSDEGAERLLNQITSDIESGKETFAAMAQRYSQDPGSAAANGE FT LGFQTPDLYVPEFKHQVEILPVGQISKPFKTVHGWHIAEVLERRQVDRTDAAMKNKAYR FT ILMNRKFNEESGAWLQEIRASAYVEILQDNDDSDENE" FT misc_feature complement(404183..404464) FT /gene="surA" FT /locus_tag="VSAL_I0370" FT /note="HMMPfam hit to PF00639, PPIC-type PPIASE FT domain,score 8.1e-27" FT /inference="protein motif:HMMPfam:PF00639" FT misc_feature complement(404510..404791) FT /gene="surA" FT /locus_tag="VSAL_I0370" FT /note="HMMPfam hit to PF00639, PPIC-type PPIASE FT domain,score 9.7e-18" FT /inference="protein motif:HMMPfam:PF00639" FT sig_peptide complement(405263..405328) FT /gene="surA" FT /locus_tag="VSAL_I0370" FT CDS complement(405399..407753) FT /transl_table=11 FT /gene="imp" FT /locus_tag="VSAL_I0371" FT /old_locus_tag="TVS0181" FT /product="organic solvent tolerance protein precursor" FT /db_xref="GOA:B6EL51" FT /db_xref="InterPro:IPR005653" FT /db_xref="InterPro:IPR007543" FT /db_xref="InterPro:IPR020889" FT /db_xref="UniProtKB/TrEMBL:B6EL51" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ78056.1" FT /translation="MSFTSRSLLASFTGCLLYGSPAIADDAGQFIPPENNIIFPLKTDA FT VNSCQVPVKMSKEEEDQQPVLIQADSVEAHNNSKATYKGNVHVIKGRQEIKADNITLHQ FT QENIAIAEGNVDYSSMDMRSTSDKVTTDLNTEDTTMINTSYKMSCQPIRGTASRVLKTG FT QAIYQLEDASFTTCPAGDKSWRVKASDIELDQSDEWATFYNARFEILDVPILYLPYITV FT PVGDTRKTGVLIPSAGLDSKNGFELSIPIYWNIAPNYDATTTINYMEKRGTQLEGNFRY FT LTDFGSGQVDAEYLGDDAKYKEKGARWGASWNHSGIYKQNWKFEVEYSQVSDITYFQDL FT NSSIGTRDEGQLQQSGEVSYRTQDWDLTMRVRDFQVLVENSYPYRLMPQMEFNYYAPQF FT YNEFDFNLNSHISKFETDDPTKPSATRVHMEPKLSLPLSGTWWSLTPETSLLYTYYTQE FT FDAKKDPSLSDLAEETDRTIPEVRINGAIYLDSTHKFLGKYLQTLEPKIQYLYVPEVDQ FT SDIYGGKGEGGYDSSKLQLDYYGLFRDRQYSGVDYIAAANQFSIGATSRFYDDTYKERM FT NISFGQILYMNGSGTANEGDDKNSSAWAIESDFNYDDYLFYHGGVQYDSNVDELQVANS FT TIEYQHSNGYVQLNYRYVSKNYIQSNVNFQDDLDKITQHGIYQAGFLTQYNINNSWQLQ FT AQYFHDTKEDYMLEALVGATYLSDCWSFGLTYSDQLIAPESAGSIGSYEPEYESNLMLS FT IAIRGLGTNTGITSGTATNALGYGRPFYLNN" FT misc_feature complement(405681..406841) FT /gene="imp" FT /locus_tag="VSAL_I0371" FT /note="HMMPfam hit to PF04453, Organic solvent tolerance FT protein, score 1.7e-135" FT /inference="protein motif:HMMPfam:PF04453" FT misc_feature complement(407157..407738) FT /gene="imp" FT /locus_tag="VSAL_I0371" FT /note="HMMPfam hit to PF03968, OstA-like protein, score FT 2.4e-44" FT /inference="protein motif:HMMPfam:PF03968" FT sig_peptide complement(407682..407753) FT /gene="imp" FT /locus_tag="VSAL_I0371" FT CDS 407960..408811 FT /transl_table=11 FT /gene="djlA" FT /locus_tag="VSAL_I0372" FT /old_locus_tag="TVS0182" FT /product="DnaJ-like protein DjlA" FT /db_xref="GOA:B6EL52" FT /db_xref="InterPro:IPR001623" FT /db_xref="InterPro:IPR003095" FT /db_xref="InterPro:IPR007791" FT /db_xref="InterPro:IPR023749" FT /db_xref="UniProtKB/TrEMBL:B6EL52" FT /protein_id="CAQ78057.1" FT /translation="MQIFGKILGGFFGFLFGGFFGAALGVFIGHQFDKAKRMANSGFTF FT QTGGASQTEKQAEFFHAAFAVMGHVAKAKGQVTAQEIQLASMMMERMNLSTAQKKEAQE FT AFIEGKENNFPLRETLQKIRSITGGRYDLLQFFLELQIASALADGDIHPSERDILHIVA FT EELGFSAAQLEKRLKMQEAAFRFQQGGGFSGQQSGSHQSNGQWQKASSANQLKDAYNLL FT GVSEDADAKAIKRAHRKLMNEHHPDKLVAKGLPPEMMNMAKEKAQEIQGAYDLIKKAKG FT IK" FT sig_peptide 407960..408034 FT /gene="djlA" FT /locus_tag="VSAL_I0372" FT misc_feature 407978..408046 FT /gene="djlA" FT /locus_tag="VSAL_I0372" FT misc_feature 408608..408805 FT /gene="djlA" FT /locus_tag="VSAL_I0372" FT /note="HMMPfam hit to PF00226, DnaJ domain, score 1.3e-09" FT /inference="protein motif:HMMPfam:PF00226" FT CDS complement(408841..409680) FT /transl_table=11 FT /locus_tag="VSAL_I0373" FT /old_locus_tag="TVS0183" FT /product="exported protein" FT /db_xref="InterPro:IPR006869" FT /db_xref="UniProtKB/TrEMBL:B6ELJ6" FT /protein_id="CAQ78058.1" FT /translation="MFNDLFKLVSLNNTKVRHLTMKIFISSLLLLFSFNSFAAPKSELW FT DYWNISNENNPTTISHQYWQQTLDKYVVAEGEYTLFDYANVTDADERTLNSYLRQMRRI FT DPREYKKAEQYAYWVNLYNAITVKIILDNYPIKSITKLGGLFSFGPWDENVVTVAGKTL FT TLNDIEHRILRPIWNDPRTHYAVNCASFGCPNLQSKAFTARNSDKLLEKAATEFINSKK FT GVLITDNKVQLSSIYDWFAVDFGNKQQLFEHLKKYRPELRPFEGDIKYDYDWKLNQQ" FT misc_feature complement(409027..409407) FT /locus_tag="VSAL_I0373" FT /note="HMMPfam hit to PF04784, Protein of unknown function, FT DUF547, score 4.1e-38" FT /inference="protein motif:HMMPfam:PF04784" FT sig_peptide complement(409567..409680) FT /locus_tag="VSAL_I0373" FT CDS complement(409804..410406) FT /transl_table=11 FT /gene="leuD" FT /locus_tag="VSAL_I0374" FT /old_locus_tag="TVS0184" FT /product="3-isopropylmalate dehydratase small subunit" FT /EC_number="4.2.1.33" FT /db_xref="GOA:B6ELJ7" FT /db_xref="InterPro:IPR000573" FT /db_xref="InterPro:IPR004431" FT /db_xref="InterPro:IPR015928" FT /db_xref="InterPro:IPR015936" FT /db_xref="InterPro:IPR015937" FT /db_xref="UniProtKB/Swiss-Prot:B6ELJ7" FT /protein_id="CAQ78059.1" FT /translation="MSGFKQHTGLVVPLDTANIDTDAIIPKQFLQKVNRTGFGKHLFHD FT WRFLDDAGQQPNPEFVMNAPRYQGASILLARENFGCGSSREHAPWALADYGIQVMIAPS FT FADIFYGNSINNQMIPVRLTDIEVDEIFQFVEANEGAEVAVDLEAMLVSANGKQYSFEI FT DEFRRHCLLNGLDNIGLTLQHADKISEYEAKIPNFLK" FT misc_feature complement(410029..410406) FT /gene="leuD" FT /locus_tag="VSAL_I0374" FT /note="HMMPfam hit to PF00694, Aconitase C-terminal domain, FT score 3.8e-62" FT /inference="protein motif:HMMPfam:PF00694" FT CDS complement(410418..411833) FT /transl_table=11 FT /gene="leuC" FT /locus_tag="VSAL_I0375" FT /old_locus_tag="TVS0185" FT /product="3-isopropylmalate dehydratase large subunit" FT /EC_number="4.2.1.33" FT /db_xref="GOA:B6ELJ8" FT /db_xref="InterPro:IPR001030" FT /db_xref="InterPro:IPR004430" FT /db_xref="InterPro:IPR015931" FT /db_xref="InterPro:IPR015932" FT /db_xref="InterPro:IPR015936" FT /db_xref="InterPro:IPR015937" FT /db_xref="InterPro:IPR018136" FT /db_xref="UniProtKB/Swiss-Prot:B6ELJ8" FT /protein_id="CAQ78060.1" FT /translation="MSNAKTLYEKVYDAHVAVAAKGETPILYIDRHLVHEVTSPQAFDG FT LREKGRNVRQVGKTFATMDHNVSTQTKDINASGEMARIQMETLSKNCEEFGVTLYDLNH FT KYQGIVHVMGPELGITLPGMTIVCGDSHTATHGAFGSLAFGIGTSEVEHVLATQTLKQA FT RAKTMKIEVKGKVTEGITAKDIVLAIIGKTTAAGGTGYVVEFCGEAITDLTMEGRMTVC FT NMAIELGAKAGLIAPDATTFDYITGRKFSPQGEDLTAAIEYWSSLKTDDDAKFDAVVSL FT DASEIKPQVTWGTNPGQVIAIDQPIPAPESFSDPVEKVSAEKALAYMGLEAGKSLTDYN FT VDKVFVGSCTNSRIEDIRAAAAVAKGNKVAAHVQALIVPGSEQVKAQAEKEGLDIIFKE FT AGFEWRLPGCSMCLAMNNDRLGPQERCASTSNRNFEGRQGRDGRTHLVSPAMAAAAAIA FT GHFVDIRTITEKA" FT misc_feature complement(410457..411818) FT /gene="leuC" FT /locus_tag="VSAL_I0375" FT /note="HMMPfam hit to PF00330, Aconitase family (aconitate FT hydratase), score 3.4e-266" FT /inference="protein motif:HMMPfam:PF00330" FT misc_feature complement(410592..410633) FT /gene="leuC" FT /locus_tag="VSAL_I0375" FT /note="PS01244 Aconitase family signature 2." FT /inference="protein motif:ProSite:PS01244" FT misc_feature complement(410763..410813) FT /gene="leuC" FT /locus_tag="VSAL_I0375" FT /note="PS00450 Aconitase family signature 1." FT /inference="protein motif:ProSite:PS00450" FT CDS complement(411849..412940) FT /transl_table=11 FT /gene="leuB" FT /locus_tag="VSAL_I0376" FT /old_locus_tag="TVS0186" FT /product="3-isopropylmalate dehydrogenase" FT /EC_number="1.1.1.85" FT /db_xref="GOA:B6ELJ9" FT /db_xref="InterPro:IPR001804" FT /db_xref="InterPro:IPR004429" FT /db_xref="InterPro:IPR019818" FT /db_xref="InterPro:IPR024084" FT /db_xref="UniProtKB/TrEMBL:B6ELJ9" FT /protein_id="CAQ78061.1" FT /translation="MTNKTYKIAILPGDGIGPEVMDQAHKVLDAIEKKHAISFSREQHD FT VGGIAIDNHGCPLPESTVKGCEESDAVLFGSVGGPKWENLPPNDQPERGALLPLRKHFE FT LFCNLRPAQIHKGLEGFSPLRADISGNGFDIVVVRELTGGIYFGQPKGREGEGPQEKAY FT DTEIYHRYEIERIAKIAFESALLRNKNVYSIDKANVLQSSILWREVVEEVAKGYPEVKL FT SHMYIDNATMQLIKDPSQFDVMLCSNIFGDIISDECAMITGSMGMLPSASLNKDNFGLY FT EPAGGSAPDIAGKNIANPVAQILSAALMLRYSLGEEEAAQSIEAAVSKALSAGELTADL FT AGNKPALTTSAMGDKIAEYILNS" FT misc_feature complement(411873..412922) FT /gene="leuB" FT /locus_tag="VSAL_I0376" FT /note="HMMPfam hit to PF00180, Isocitrate/isopropylmalate FT dehydrogenase, score 2.2e-210" FT /inference="protein motif:HMMPfam:PF00180" FT misc_feature complement(412140..412199) FT /gene="leuB" FT /locus_tag="VSAL_I0376" FT /note="PS00470 Isocitrate and isopropylmalate FT dehydrogenases signature." FT /inference="protein motif:ProSite:PS00470" FT CDS complement(413018..414565) FT /transl_table=11 FT /gene="leuA" FT /locus_tag="VSAL_I0377" FT /old_locus_tag="TVS0187" FT /product="2-isopropylmalate synthase" FT /EC_number="2.3.3.13" FT /db_xref="GOA:B6ELK0" FT /db_xref="InterPro:IPR000891" FT /db_xref="InterPro:IPR002034" FT /db_xref="InterPro:IPR005671" FT /db_xref="InterPro:IPR013709" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:B6ELK0" FT /protein_id="CAQ78062.1" FT /translation="MSDQVIIFDTTLRDGEQALSASLTVKEKLQIAFALERLGVDVIEA FT GFPISSPGDFESVRTIAKHIKNSRICALSRAVTKDIDVAADALKVAEAFRIHTFISTST FT VHVQDKLRRSYDDVVEMGVKAVQRARKYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGA FT NTINIPDTVGYTIPGEFGGIIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAVQAGA FT RQVEGTINGIGERAGNCSLEEIAMILQTRSEYLGVHTSLKNDEIHRTSKLVSQLCNMPI FT QSNKAIVGANAFSHSSGIHQDGMLKNKNTYEIMTPESIGLKNKALNLTSRSGRAAVKSH FT MDSMGYKAEEYNLDTLYADFVKLADRKGQVFDYDLEALMHFANLRDEDDFYKLNYLSVQ FT SGSVMATTSIKLLCGDEEKCEAAVGNGPVDALYQCIYKLTGYEIVLDKFDLTAKGEGED FT GLGQADIIANYKGRKYHGTGLATDIIEASGQALLHVINSIHRADQIAEIKQNKITTV" FT misc_feature complement(413069..413461) FT /gene="leuA" FT /locus_tag="VSAL_I0377" FT /note="HMMPfam hit to PF08502, LeuA allosteric FT (dimerisation) domain, score 8.3e-52" FT /inference="protein motif:HMMPfam:PF08502" FT misc_feature complement(413729..414529) FT /gene="leuA" FT /locus_tag="VSAL_I0377" FT /note="HMMPfam hit to PF00682, HMGL-like, score 3.4e-137" FT /inference="protein motif:HMMPfam:PF00682" FT misc_feature complement(413930..413971) FT /gene="leuA" FT /locus_tag="VSAL_I0377" FT /note="PS00816 Alpha-isopropylmalate and homocitrate FT synthases signature 2." FT /inference="protein motif:ProSite:PS00816" FT misc_feature complement(414482..414532) FT /gene="leuA" FT /locus_tag="VSAL_I0377" FT /note="PS00815 Alpha-isopropylmalate and homocitrate FT synthases signature 1." FT /inference="protein motif:ProSite:PS00815" FT CDS join(415037..415447,415451..415681) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0378" FT /old_locus_tag="TVS0188" FT /product="transcriptional regulator, AcrR/TetR family FT (pseudogene)" FT /note="Similar to Vibrio fischeri Hypothetical protein FT UniProt:Q5E855 (214 aa) fasta scores: E()=1.2e-60, 80.193% FT id in 207 aa. CDS contains a nonsense mutation (CAA to TAA) FT after codon 137. The sequence has been checked and is FT believed to be correct" FT /db_xref="PSEUDO:CAQ78063.1" FT /inference="similar to sequence:UniProt:Q5E855" FT misc_feature 415097..415237 FT /locus_tag="VSAL_I0378" FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 4.5e-12" FT /inference="protein motif:HMMPfam:PF00440" FT CDS 415681..417000 FT /transl_table=11 FT /locus_tag="VSAL_I0379" FT /old_locus_tag="TVS0189" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6ELK2" FT /protein_id="CAQ78064.1" FT /translation="MKITKKLLFFPVVAIGVIILVTITKLRPEAEVKPVEDRSKIVKTI FT ALEQQSIAPKVIGFGKIRPKFEWKAIAEVSGKVVYRHPELNKGNVLLAGTEVLRIDPLD FT YELKLAQAEADLGSSETQLAKVDLEEKNIRNTLKIEKNRLAISKKELSRKVNLQKKGLT FT SQSDLDQQNQSYLAQQKVVLDIQNQILLLPDERKVAQAIVKVNQAKLKEAQRSLDKTSI FT VLPTDVRISEVDIEADQVVNLQQEIFIAHGIKTMEVEAQVSIHDMQTLVHSFGMFQSNE FT QGMPNLDSLPLKANVQLSSGRFNAEWQAQVARISETVDPNQATVGIILEIQQDYRSLTP FT STLPPLVNGMFVKAEIEGEVSPQWVIPESALHGDKIYLLNNDSQLTILPVNIVFRRDNQ FT VAIVGDITSGDLLILNDLLPAINGMQLRSVEQRKEGESAE" FT misc_feature 415699..415752 FT /locus_tag="VSAL_I0379" FT CDS 416997..420101 FT /transl_table=11 FT /locus_tag="VSAL_I0380" FT /old_locus_tag="TVS0190" FT /product="integral membrane protein, AcrB/AcrD/AcrF family" FT /db_xref="GOA:B6ELK3" FT /db_xref="InterPro:IPR001036" FT /db_xref="UniProtKB/TrEMBL:B6ELK3" FT /protein_id="CAQ78065.1" FT /translation="MIKFFARHPTAANLLMLSILLLGVVSLSQLKRETFPEFSPPYILA FT GVVYPGASPQEVEESICIRLEDAVDGLGNIEETKCEAIEGSARLVIKLNAKADIGRMLV FT DVQTQIDSINDFPKEIESPIVQELDWNEPVVDVAITADTTWPELKAYAEKLKQSLKLDY FT DVSLVEVSGFSDHQYRVELDEGAIRQLGLNVSDIANKLAEQNVKLPSGSIETPEKNFLI FT RFDERKTTPQELAKTVMGASANGALIRLGDIATITDRFELDEQKVLFDGKPSALLKISK FT NKEEDALRIKDRVTEFVKYQQSVAPDGVALEMTNDLSSLLWDRLTMMVKNGWQGIILVF FT LTMWLFFTFRYSFWVAAGLPVAFLGGLFLMASFGLSINIMSLVALLMAIGIMMDDAIVI FT AESIASHLDRGQEIDDAVYNGVKKVFPGVLSSFLTTVCIFGSLMFLQGEMGAVLKVIPQ FT VLILVLSLSLIEAFLILPNHLSHSLHKAKKDKPISGIKKIVLDRFEHFRNVTLVKAVTK FT VVEWRYAFLGAVIASLLISFSLISGGALKFVGFPELDGDIAEARIILPPGTSLSQTEIV FT VDKIVSAAEKLNKEWCDNNEDGRPLVEHITQQFNTNADASESGPHLATIRLDLLGAEER FT TTLIDDFIDAWREEVGDLAEPITMVYKQPTMGPGGRAIEIRMMDDDLHTLKSASLEVQA FT YLNEFSGVYGVLDDMRMGKEEVLVKLRPGAETYGVTGQLIANQLRAAYFGQTADEIQLG FT VENIEIEVRLNKEQAGDLHTLENFPIIMPDGSQIPLASIATLDFQRNYVRIQRINGLRT FT LSVFGDVHASQVSSSEILAQFRSELAPALQNKYPRLRFDFEGEAKDTAETGQSMGTGFM FT LGLFGVFVILSFQFRSYLEPFVVMLAIPLALIGVLWGHVLLGHPLSMPSIMGFVSLAGI FT VVNDSILLVQYIRHHVDEGDSVYEAVVKASQERFRAVFLTSVTTAVGLLPLLLETSLQA FT QVIQPLVVSIVFGIFTSTLLVLFMIPAAYAILADFGLVKKHEELH" FT misc_feature 416997..420062 FT /locus_tag="VSAL_I0380" FT /note="HMMPfam hit to PF00873, AcrB/AcrD/AcrF family,score FT 3.6e-72" FT /inference="protein motif:HMMPfam:PF00873" FT sig_peptide 416997..417080 FT /locus_tag="VSAL_I0380" FT misc_feature order(417024..417077,417990..418058,418086..418154, FT 418266..418334,418362..418430,418563..418631, FT 419592..419651,419670..419729,419757..419825, FT 419886..419945,419988..420056) FT /locus_tag="VSAL_I0380" FT CDS complement(420124..421125) FT /transl_table=11 FT /locus_tag="VSAL_I0381" FT /old_locus_tag="TVS0191" FT /product="putative exported protein" FT /note="130 amino acid residues longer than the V.fischeri FT homologue" FT /db_xref="InterPro:IPR007433" FT /db_xref="UniProtKB/TrEMBL:B6ELK4" FT /protein_id="CAQ78066.1" FT /translation="MLKKVLLTGLIAINASVHASEIESEDADTSPPSPRESQVELGYGS FT DNSLSLNCSLEPVYTSGQNSHASDVKYYLSKDECETDTEQLTLEKKPSISVPTSEIDTE FT DDDTSPPSPWESQVEFGYQSSKGNDDSQSLNGRLEASYTSGQHRHTGEVKYYLSKEDGE FT TDKDQLSLNLQSDYKISPDYYLYANFKGLETEYSAYFKDYTFSGGLGYQASNTEKLVLE FT LELGPGYRYQNPNLDEIDDDDLIFPETVAEAILRTNITVSWKPMDVLTLASEVTVTSGR FT SNTRIDSEVSLTNNITEEIALKIAQSQEYLDRVPPGLSKTDSVISVNLLFLF" FT misc_feature complement(420127..420843) FT /locus_tag="VSAL_I0381" FT /note="HMMPfam hit to PF04338, Protein of unknown function, FT DUF481, score 3.4e-73" FT /inference="protein motif:HMMPfam:PF04338" FT sig_peptide complement(421069..421125) FT /locus_tag="VSAL_I0381" FT CDS 421307..422704 FT /transl_table=11 FT /gene="dnaB" FT /locus_tag="VSAL_I0382" FT /old_locus_tag="TVS0192" FT /product="replicative DNA helicase" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6ELK5" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR007692" FT /db_xref="InterPro:IPR007693" FT /db_xref="InterPro:IPR007694" FT /db_xref="InterPro:IPR016136" FT /db_xref="UniProtKB/TrEMBL:B6ELK5" FT /protein_id="CAQ78067.1" FT /translation="MADNRNQNRKYDAQVDALKVPPHSLEAEQSVLGGLLLDNERWDTV FT AEKVVAVDFYSRPHRLIFESVKSILEDSMPLDLITLSEHLERHEKLDSVGGFAYLADLV FT KNTPSAANINAYADIVRERAMVRNLISVANEIADAGYDPQGRTSEDLLDMAESKVFAIA FT EARTTENEGPQTVDTILERTLERIELLYQSPQDGVTGVSTGFTDLNKKTAGLQGSDLII FT VAARPSMGKTTFAMNLCENAAMDQDKPVLIFSLEMPAEQLMMRMLASMSRVDQTKIRTG FT QLDDEDWARISSTMGILTQKKNMYIDDSSGLTPTELRSRARRVARESGGLSMIMIDYLQ FT LMRVPGMQDNRTQEISEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPINSDLRES FT GAIEQDADLIMFIYRDEVYNPESNRKGIAEIILGKQRNGPIGSVSLTFQGQFSRFDNYA FT GPAFDDE" FT misc_feature 421364..421672 FT /gene="dnaB" FT /locus_tag="VSAL_I0382" FT /note="HMMPfam hit to PF00772, DnaB-like helicase N FT terminal domain, score 3.8e-54" FT /inference="protein motif:HMMPfam:PF00772" FT misc_feature 421895..422494 FT /gene="dnaB" FT /locus_tag="VSAL_I0382" FT /note="HMMPfam hit to PF03796, DnaB-like helicase C FT terminal domain, score 2e-141" FT /inference="protein motif:HMMPfam:PF03796" FT misc_feature 421979..422002 FT /gene="dnaB" FT /locus_tag="VSAL_I0382" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 422384..422449 FT /gene="dnaB" FT /locus_tag="VSAL_I0382" FT /note="Predicted helix-turn-helix motif with score FT 1557.000, SD 4.49 at aa 360-381, sequence FT RSLKALAKELNVPVVALSQLNR" FT CDS 422726..423802 FT /transl_table=11 FT /gene="alr" FT /locus_tag="VSAL_I0383" FT /old_locus_tag="TVS0193" FT /product="alanine racemase" FT /EC_number="5.1.1.1" FT /db_xref="GOA:B6ELK6" FT /db_xref="InterPro:IPR000821" FT /db_xref="InterPro:IPR001608" FT /db_xref="InterPro:IPR009006" FT /db_xref="InterPro:IPR011079" FT /db_xref="InterPro:IPR020622" FT /db_xref="UniProtKB/Swiss-Prot:B6ELK6" FT /protein_id="CAQ78068.1" FT /translation="MTAAAAQIDMSALAHNLQKIKQQAPNSKLLAVVKANGYGHGLLNI FT AKGAHGVDAFGVARIEEALQLRAGGIVKQVLLLEGFYSAGDLPILVANNIQTAVHCKEQ FT LEALENADLEGPVVVWLKVDSGMHRLGIRPEEYQEYVDRLHACKNVAQPLRYMSHFGCA FT DELDNPTTNEQIETFMSLTDGCQGERSLAASAGLLAWPDSQLDWVRPGIIMYGVSPFSE FT KTAQDLGYLPTMTLTSHLIAVREVKAGESVGYGAMWTSERDTKIGVIAIGYGDGYPIAA FT PNGTPVLVNGRKVPVAGRVSMDMLTVDLGPDAEDNVGDEAILWGRDLPAEEVAEHIGTI FT AYELVTKLTSRVQMQYIP" FT misc_feature 422732..423385 FT /gene="alr" FT /locus_tag="VSAL_I0383" FT /note="HMMPfam hit to PF01168, Alanine racemase,N-terminal FT domain, score 1.7e-93" FT /inference="protein motif:HMMPfam:PF01168" FT misc_feature 422816..422848 FT /gene="alr" FT /locus_tag="VSAL_I0383" FT /note="PS00395 Alanine racemase pyridoxal-phosphate FT attachment site." FT /inference="protein motif:ProSite:PS00395" FT misc_feature 423422..423796 FT /gene="alr" FT /locus_tag="VSAL_I0383" FT /note="HMMPfam hit to PF00842, Alanine racemase,C-terminal FT domain, score 7.1e-72" FT /inference="protein motif:HMMPfam:PF00842" FT CDS 423817..425037 FT /transl_table=11 FT /locus_tag="VSAL_I0384" FT /old_locus_tag="TVS0194" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:B6ELK7" FT /protein_id="CAQ78069.1" FT /translation="MRVNLKQLFLRSATGLALFLISPYVFSESDIWPNSLPETAAVPFM FT YSSESLGTTIGVAGVMKGVGQPQATLFAAGMYSSKGSYLTYLSSDNNQVGHSWLFGANA FT YNASFKDMDYYIGTAGSNNSHQSDEVFTDSTEAQYHLTANYILPIGNAKDIGAQAAYTP FT NRKVKSGNPFDSGVSSIELSPFYYSRTLSDVSDWDEPESNWGMKVNFDWDNRNSVRNTT FT NGSRTELDFTYSPETSSQEEWWTWEFQQSAFFDLGGIGNVIKKQVLAFDFYLADTPSWE FT DGAHQPPEYAGIKLGGLYRLRSYGGGRFHGRSAVHYSAEYRVMPDWQPLEDWPIFNLYD FT VPWWQWVAFVDTGRVADEFSLSTLHDDMRWSAGGAIRFQVEGIVVRTEMAWGSEENVFR FT VMINQPF" FT sig_peptide 423817..423897 FT /locus_tag="VSAL_I0384" FT CDS 425233..426885 FT /transl_table=11 FT /gene="pgi" FT /locus_tag="VSAL_I0385" FT /old_locus_tag="TVS0195" FT /product="glucose-6-phosphate isomerase" FT /EC_number="5.3.1.9" FT /db_xref="GOA:B6ELK8" FT /db_xref="InterPro:IPR001672" FT /db_xref="InterPro:IPR018189" FT /db_xref="InterPro:IPR023096" FT /db_xref="UniProtKB/Swiss-Prot:B6ELK8" FT /protein_id="CAQ78070.1" FT /translation="MLKNINPTETQAWADLTAHFETAQNFNLADLFSADAQRFDKFSTT FT FGQDILVDFSKNLVTEETMQKLFSLAEQTELSEAIKAMFSGEKINKTEDRSVLHTALRN FT RSNTPVIVDGEDVMPAVNAVLEKMKAFTERLISGEWKGYTGKEITDIVNIGIGGSDLGP FT YMVSEALAPYKTRLNMHFVSNVDGTHIVETLKPLNPETTLFLIASKTFTTQETMTNAHS FT ARDWFLAEAGDQAHVAKHFAALSTNAESVSEFGIDTDNMFEFWDWVGGRYSLWSAIGLS FT IALAVGFDNFVELLEGAHEVDNHFANTELENNVPVILALIGLWYNNFHGSESESILPYD FT QYLHRFAAYFQQGNMESNGKCVDRNGNPVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKL FT IPCDFIAPAISHNQVGDHHQKLMSNFFAQTEALAFGKKEETVRAEFAAAGKTEAEMAEL FT VAFKVFEGNRPTNSILVKKVTPKTLGNLIAMYEHKIFVQGVIWNIFSFDQWGVELGKQL FT ANQILPELADDKAINSHDSSTNGLINAFKAFKA" FT misc_feature 425389..426858 FT /gene="pgi" FT /locus_tag="VSAL_I0385" FT /note="HMMPfam hit to PF00342, Phosphoglucose FT isomerase,score 0" FT /inference="protein motif:HMMPfam:PF00342" FT misc_feature 426028..426069 FT /gene="pgi" FT /locus_tag="VSAL_I0385" FT /note="PS00765 Phosphoglucose isomerase signature 1." FT /inference="protein motif:ProSite:PS00765" FT misc_feature 426217..426249 FT /gene="pgi" FT /locus_tag="VSAL_I0385" FT /note="PS00133 Zinc carboxypeptidases, zinc-binding region FT 2 signature." FT /inference="protein motif:ProSite:PS00133" FT misc_feature 426724..426777 FT /gene="pgi" FT /locus_tag="VSAL_I0385" FT /note="PS00174 Phosphoglucose isomerase signature 2." FT /inference="protein motif:ProSite:PS00174" FT CDS complement(426981..427475) FT /transl_table=11 FT /locus_tag="VSAL_I0386" FT /old_locus_tag="TVS0196" FT /product="putative chemotaxis protein" FT /db_xref="InterPro:IPR007597" FT /db_xref="UniProtKB/TrEMBL:B6ELK9" FT /protein_id="CAQ78071.1" FT /translation="MRAEFVNPFLASLMNVLKTMASMELKPQKPRIKKDEIARGDVSGL FT IGMVASQSRGSMSITFEESLALQIMQNMLGERPNSINEEVTDMVGEITNMVTGGAKRIL FT SESGFEFDMAIPMVVSGRAHTITHKCEGAIIIMPFTSEWGNAFIEICFENRDELKKERL FT M" FT misc_feature complement(427116..427226) FT /locus_tag="VSAL_I0386" FT /note="HMMPfam hit to PF04509, CheC-like family, score FT 6.6e-08" FT /inference="protein motif:HMMPfam:PF04509" FT CDS complement(427496..427945) FT /transl_table=11 FT /gene="zur" FT /locus_tag="VSAL_I0387" FT /old_locus_tag="TVS0197" FT /product="zinc uptake regulation protein" FT /db_xref="GOA:B6ELL0" FT /db_xref="InterPro:IPR002481" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6ELL0" FT /protein_id="CAQ78072.1" FT /translation="MNSSQKQKVEQLCQQRGVRLTQQRLTVLELIVIHHGAISAYDLLE FT QLKKIEPQAKPPTIYRALDFLVTQGFVHKVESINSYISCCVIGEHAHFSQLFICRTCDD FT VVECHDTKITEQLTKHAEQIEFSVENHIVETHGTCKACLHSDNQN" FT misc_feature complement(427538..427903) FT /gene="zur" FT /locus_tag="VSAL_I0387" FT /note="HMMPfam hit to PF01475, Ferric uptake regulator FT family, score 1.2e-05" FT /inference="protein motif:HMMPfam:PF01475" FT CDS 428519..428800 FT /transl_table=11 FT /locus_tag="VSAL_I0388" FT /old_locus_tag="TVS0198" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6ELL1" FT /protein_id="CAQ78073.1" FT /translation="MMTANSIKLELFLSNERFNLLSLFNGCAHRYEFKQLIRCMHSENE FT CSSLPFASLLRYVDCYQLKGIFSLMEYYSNGHSIESAFSPEYFQTLLK" FT CDS complement(428844..429683) FT /transl_table=11 FT /locus_tag="VSAL_I0389" FT /old_locus_tag="TVS0199" FT /product="hypothetical protein, putative phage gene" FT /note="Similar to central part of Vibrio parahaemolyticus FT (Q8L0W3) Hypothetical protein (Fragment)" FT /db_xref="UniProtKB/TrEMBL:B6ELL2" FT /protein_id="CAQ78074.1" FT /translation="MLKNWTVITQAVKNGADGIMARERYLLSTQHPNHKHTELIIPIIG FT NKNTSLRIAIAGEKFKLQQKINNKKGGRPLSSFGMEYCLTLPKIHRPTPQQWRAIIADC FT CMCLAYTLKLNPNELIQYKSQIRAVLHQQPQIGRTGSGDHVHLIIGKVINNKVLKELQQ FT KKVTSLIKQAFNTAVLKHVGLDHREYKTYELSRGKRLETWKYQHQKAEESICIQKNIIK FT LQNQTNKWLTAFELSNFKNKNRQFNRLIKTFDLLSTYSLSPEQQRQIDSMKAIINKI" FT CDS 429880..430272 FT /transl_table=11 FT /locus_tag="VSAL_I0390" FT /old_locus_tag="TVS0200" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6ELL3" FT /protein_id="CAQ78075.1" FT /translation="MEKKHSALSDNVETENQQYNFNKSLAYALMDSRRGHVMLRKFVLD FT LCEKSRLITADDETKKTLKYRWLIDVIELNIKTIELLELSDSGDYTYNSIEDMKVSIEA FT KSIIIVKDIVRRIIHTPMYFPINKDK" FT misc_feature 430090..430113 FT /locus_tag="VSAL_I0390" FT /note="PS00867 Carbamoyl-phosphate synthase subdomain FT signature 2." FT /inference="protein motif:ProSite:PS00867" FT CDS 430429..431454 FT /transl_table=11 FT /locus_tag="VSAL_I0391" FT /old_locus_tag="TVS0201" FT /product="hypothetical protein, ADP-ribose binding protein" FT /db_xref="InterPro:IPR002589" FT /db_xref="UniProtKB/TrEMBL:B6ELL4" FT /protein_id="CAQ78076.1" FT /translation="MIVYVKGDLLNDDAEALVNAVNTVGVMGKGLAYQFKEKFHENFLI FT YRDVCKKELLSVGKVLLVETDEGSIPNYIINFPTKAHWRGKSKIEYIEEGLNDLIKVVK FT ENQINSVALPALGSGLGGLPWSQVERVMLDKLSNIENIEWRIYAPNNTPNLRKKLPLTE FT GRSILIYTLNYYLRMTKKQQLTELEIHCLMYLLQCNGLSLTGIKFNEFREVPFSDVLHV FT ALSKMDGDFLYISGVNKPIQSSFITLESKIVVEAKKLLQKKVEKIKKISDVMELISGYE FT SKDGMAIISTALWVANENKNANVDLANTTLDIISNNFNSSNGVVKGAFVRLYEEKWLPL FT N" FT misc_feature 430480..430824 FT /locus_tag="VSAL_I0391" FT /note="HMMPfam hit to PF01661, Appr-1-p processing enzyme FT family, score 1.5e-22" FT /inference="protein motif:HMMPfam:PF01661" FT CDS complement(431463..431678) FT /transl_table=11 FT /locus_tag="VSAL_I0392" FT /old_locus_tag="TVS0202" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6ELL5" FT /protein_id="CAQ78077.1" FT /translation="MNQRDYGDDEGRSVCMAECLSPNPVPATNITQIYVATQENKESVE FT SILRDYQLSPHVNLNAAMFPKRGSRD" FT repeat_region 431696..432817 FT /note="VSa8" FT repeat_region 431696..431724 FT /note="IR of VSa8" FT CDS 431804..432226 FT /transl_table=11 FT /locus_tag="VSAL_I0393" FT /old_locus_tag="TVS0203" FT /product="transposase" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:B6EGL6" FT /protein_id="CAQ78078.1" FT /translation="MKAVNPLTDNEKITLKEAIANHPKNRVRIRAHAIILSDKGYSILA FT LTDILDAKFETISSWIDHWEACGMLGLYDAVRIGRKPIYTEAEVYRLKSLVDEEPHQLK FT RAQAILEEETGKKSSLDTIKRNIKKVITVTKEPDTH" FT CDS 432244..432810 FT /transl_table=11 FT /locus_tag="VSAL_I0394" FT /old_locus_tag="TVS0204" FT /product="transposase" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:B6ELL7" FT /protein_id="CAQ78079.1" FT /translation="MKFNNFSNILNSLIEMERTNKCELFYFDESGFSQKSNLPYCWGPI FT GVQSLRPAHSHSKRLNVLGFLSRQGKLSFQTTEGRVTTDTVIDAFEHFINARKNDKPCF FT IILDNASFHRSAKFKQKLHEWLINDVLVCYLPPYSPELNIIEILWKKVKYEWLPCEAFK FT TFEDLSINIKNILNYYGEKFTITFA" FT repeat_region 432789..432817 FT /note="IR of VSa8" FT CDS complement(432820..433170) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0395" FT /old_locus_tag="TVS0205" FT /product="hypothetical protein, putative phage gene FT (fragment)" FT /note="No significant database matches. CDS is probably FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT CDS complement(433433..434509) FT /transl_table=11 FT /locus_tag="VSAL_I0396" FT /old_locus_tag="TVS0206" FT /product="hypothetical protein, putative phage gene" FT /note="Weakly similar to Bacteriophage BFK20 ORF43 FT UniProt:Q3V5F2 (982 aa) fasta scores: E()=1.5e-11, 33.803% FT id in 213 aa" FT /db_xref="UniProtKB/TrEMBL:B6ELL8" FT /inference="similar to sequence:UniProt:Q3V5F2" FT /protein_id="CAQ78081.1" FT /translation="MEFKHMSQQIQNLELNTKNHLERFGTLLFSIGSKGYDCVANWLVH FT DLIPSSSFGIIYGASGSLKSFLAIDLCCSITRGNHWNYHAVKKGAVVYVAAEGQMGVAK FT RIKACEIANSIKTEHLYVLGHSLTMSEESNQEALITAIQEIEQTRNVKVQLVVLDTLAR FT CYSGDENTSRDMSAFVHGCDIVRAVTDTTILCIHHSGRDEAKGARGSSALKAACDFEFH FT VKRTGKSKLLTFTNTKQKDGEEAPNMEVEFDSIELGINDVNGKALTSLALIKSVVQQHN FT LIVSDNPVIKALQENSISKIKRTHLKEMLFPNTTMNVAQRKSLSRWLKNLESDGKILIE FT KISIQKSSPDDMIVNLLH" FT CDS complement(434540..435601) FT /transl_table=11 FT /locus_tag="VSAL_I0397" FT /old_locus_tag="TVS0207" FT /product="shufflon-specific DNA recombinase" FT /note="Similar to Escherichia coli Shufflon-specific DNA FT recombinase rci UniProt:P16470 (384 aa) fasta scores: FT E()=1e-14, 33.065% id in 248 aa" FT /db_xref="GOA:B6ELL9" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:B6ELL9" FT /inference="similar to sequence:UniProt:P16470" FT /protein_id="CAQ78082.1" FT /translation="MATKTIETVKRKNGTSYKARVRLTSYGKTIAEYCQCFNLYIDAKK FT WSEKIAKEADSKGATWLNAQKNPKKILISDVLLMVLTRSPTAENLKKSKRSNLKKLQSY FT PIAKIPLTSLTAKHLFEHCVLRCQTVKPQTVAHDLSNLSTALKDASVFFDLPFDSSVFT FT NAYSSLQRHGFIARSDIRTRRPNKNELKLIIDELSLNRKNYLLHIFELTLETALRRGEI FT TKLRWQDFNLKNKTLTVRGRKHPCNSKRQTTTIPLSKKAVEILIKIPKNIESDLIFTIK FT SASISTNWRKLMKKLKIKDLHFHDLRAEAACRFFELGLTPVEIAKITGHRDINILMNIY FT LRLKVSPERLLVA" FT misc_feature complement(434546..435064) FT /locus_tag="VSAL_I0397" FT /note="HMMPfam hit to PF00589, Phage integrase family,score FT 2.5e-27" FT /inference="protein motif:HMMPfam:PF00589" FT CDS complement(435736..436806) FT /transl_table=11 FT /locus_tag="VSAL_I0398" FT /old_locus_tag="TVS0208" FT /product="shufflon-specific DNA recombinase" FT /note="Similar to Escherichia coli Shufflon-specific DNA FT recombinase rci UniProt:P10487 (384 aa) fasta scores: FT E()=1.3e-11, 27.211% id in 294 aa" FT /db_xref="GOA:B6ELM0" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:B6ELM0" FT /inference="similar to sequence:UniProt:P10487" FT /protein_id="CAQ78083.1" FT /translation="MATVAIEKVIGKKAIKYKARVRLTSNRKRIFEQSKTFTKESEAKN FT WATKLAKQLNKSGVPTEKQKTILIGDLITKYLIDPVTSASIGRSKYAVLSRLRAYDIAL FT IQADLLTAHDLINHCRVRKEESTHPLPQTIYHDITYLKSVIDVAEPMFGYIANTKAHHD FT AIPTLVRYDLIGRSQRRERRPTNKELVTMEQGLTRRQSHRCANIPLVDIFHLSIMTCMR FT LGEITRITWDDVDFKASTLTIRDRKDPRNKHGNNCIIPLYQKVKEIIERQPKVGTLIFP FT YKKESIGAAWQRVCKEEGIEDLHYHDLRAEGACQLFERGLNIVEVSKITGHKDINVLNN FT VYLRLGISEIHHNLSS" FT misc_feature complement(435751..436221) FT /locus_tag="VSAL_I0398" FT /note="HMMPfam hit to PF00589, Phage integrase family,score FT 2.7e-14" FT /inference="protein motif:HMMPfam:PF00589" FT CDS 437014..438030 FT /transl_table=11 FT /gene="dusA" FT /locus_tag="VSAL_I0399" FT /old_locus_tag="TVS0209" FT /product="tRNA-dihydrouridine synthase A" FT /EC_number="1.-.-.-" FT /db_xref="GOA:B6ELM1" FT /db_xref="InterPro:IPR001269" FT /db_xref="InterPro:IPR004653" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR018517" FT /db_xref="UniProtKB/TrEMBL:B6ELM1" FT /protein_id="CAQ78084.1" FT /translation="MANTLNSKEILTMHPLQRFSVAPMLDWTDRHCRYFHRQLSEHALL FT YSEMITTGAIIHGKGDFLAYNEEEHPLALQLGGSNAKDLAHCAKLAADRGYDEINLNVG FT CPSDRVQNGRFGACLMADPELVAECIAEMKAVVDIPVTVKTRIGIDDQDSYEFLTKFVS FT TVHEKGGCDQFTIHARKAWLSGLSPKENREIPPLDYPRAYQIKKDFPQLIIAVNGGIKT FT LEEAKEHLAHLDGVMIGREAYQSPYLLAEVDQQLFGSDKPIKKRREIVESMYPYIERQL FT ENGAHLGHITRHMLGLFQSMPGARQWRRYISENAHKPGSGIEVVQAALAKIPAELDV" FT misc_feature 437071..438012 FT /gene="dusA" FT /locus_tag="VSAL_I0399" FT /note="HMMPfam hit to PF01207, Dihydrouridine synthase FT (Dus), score 2.3e-131" FT /inference="protein motif:HMMPfam:PF01207" FT misc_feature 437308..437364 FT /gene="dusA" FT /locus_tag="VSAL_I0399" FT /note="PS01136 Uncharacterized protein family UPF0034 FT signature." FT /inference="protein motif:ProSite:PS01136" FT CDS 438149..438847 FT /transl_table=11 FT /locus_tag="VSAL_I0400" FT /old_locus_tag="TVS0210" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:B6ELM2" FT /protein_id="CAQ78085.1" FT /translation="MNKLSLTTVVASVVLVLAVPAHSAEKEFTTKIAIDAWFPDGKVGS FT KDNAVRDNDVDASQAFSIAFEHPYPILPNVKVRYTPVKADRFEYDQIDYTGYYKLLDTN FT GLQFDVGLTLTQFANGEFNKGGSVDSTQPHDQSFSETAMNMYADASLHIPNTNFHIFGQ FT YDFGSSSDTRTMDGQAGVKYILPVDETVDVEFKLGYRVMDHEFGYFEGFDSDQANVMVD FT GWFGGLSFDF" FT sig_peptide 438149..438217 FT /locus_tag="VSAL_I0400" FT CDS 438951..439223 FT /transl_table=11 FT /locus_tag="VSAL_I0401" FT /old_locus_tag="TVS0211" FT /product="hypothetical protein" FT /note="Alternative start at codon 15" FT /db_xref="UniProtKB/TrEMBL:B6ELM3" FT /protein_id="CAQ78086.1" FT /translation="MDITMIFIFVKDAVMTTLSELKLMYQEDQLVEAVIESAMVEDTWI FT VEFRHVHGGLVLLTDMKGGELKYRDLESASKSALAVGFNQVRIND" FT CDS 439340..441181 FT /transl_table=11 FT /gene="cysJ" FT /locus_tag="VSAL_I0402" FT /old_locus_tag="TVS0212" FT /product="sulfite reductase [NADPH] flavoprotein FT alpha-component" FT /EC_number="1.8.1.2" FT /db_xref="GOA:B6ELM4" FT /db_xref="InterPro:IPR001094" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR001709" FT /db_xref="InterPro:IPR003097" FT /db_xref="InterPro:IPR008254" FT /db_xref="InterPro:IPR010199" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="InterPro:IPR023173" FT /db_xref="UniProtKB/TrEMBL:B6ELM4" FT /protein_id="CAQ78087.1" FT /translation="MNRDVVMLLKELSALASPLNDQQIGQLQLAASELSPQQLAWVSGY FT LWGVSQTSGATQPANQAAVAVSSEPVSKLSIIYASQTGNAKGVAEALKAEASAIGIRVE FT LFDASDYKGKNLAKETHVIIVASTNGEGEAPDNGIELHEFLQSKKAPKLDKLHYGVIGL FT GDSSYEFFCQTGKDFDGFLAKKGATAFIDRIDLDVDYEASAVEWRKQALEKVKETLSTD FT NESKNGQVVQLPVGQAARSASQYSKQNPYTATLLASQKITGRDSGKDVRHIEIDLEDSG FT LTYQPGDALGVWFENSLELVTAVLKQVGLTGEEHIEVDDESISLQKALIEKYEITSANP FT QQVSKFSELSGSKKLEKLVQDKDKLRQYAGNTQVIDLLSEKKTKLTAEQLVGLLRRLTP FT RLYSIASSQSEVDEEVHLTVGVVEYQLGDETRFGGASSFLSHRLEEGAEVNVFIEHNNN FT FKLPQDDNVPVIMIGPGTGIAPFRAFVQERDNRDAEGKNWLFFGDRTFTQDFLYQVEWQ FT KYLKSGVINQLDVAFSRDQQEKVYVQHRILEHSIQVWQWLQDGAYIYVCGDATRMAKDV FT HEALITIVEQQGKKNREEAEQFVNDLRKAKRYQRDVY" FT misc_feature 439565..439960 FT /gene="cysJ" FT /locus_tag="VSAL_I0402" FT /note="HMMPfam hit to PF00258, Flavodoxin, score 1.2e-34" FT /inference="protein motif:HMMPfam:PF00258" FT misc_feature 440066..440653 FT /gene="cysJ" FT /locus_tag="VSAL_I0402" FT /note="HMMPfam hit to PF00667, FAD binding domain, score FT 1e-43" FT /inference="protein motif:HMMPfam:PF00667" FT misc_feature 440747..441073 FT /gene="cysJ" FT /locus_tag="VSAL_I0402" FT /note="HMMPfam hit to PF00175, Oxidoreductase NAD-binding FT domain, score 7.1e-31" FT /inference="protein motif:HMMPfam:PF00175" FT CDS 441181..442911 FT /transl_table=11 FT /gene="cysI" FT /locus_tag="VSAL_I0403" FT /old_locus_tag="TVS0213" FT /product="sulfite reductase [NADPH] hemoprotein FT beta-component" FT /EC_number="1.8.1.2" FT /db_xref="GOA:B6ELM5" FT /db_xref="InterPro:IPR005117" FT /db_xref="InterPro:IPR006066" FT /db_xref="InterPro:IPR006067" FT /db_xref="InterPro:IPR011786" FT /db_xref="UniProtKB/Swiss-Prot:B6ELM5" FT /protein_id="CAQ78088.1" FT /translation="MSEQIAVKTILSGTELGPLADNERLKRESKNLRGTIVEDLQDRIT FT GGFTNDNFQLIRFHGMYQQDDRDIRAERAKQKLEPLHNVMLRARMPGGIITPKQWLAID FT KFAEENTSYGSLRLTTRQTFQFHGVLKPNIKLMHQTLNSIGIDSIATAGDVNRNVLCTT FT NPVESELHQEAYEWAKKISEHLLPKTRAYAEIWLDGEKLETTDEEPILGSNYLPRKFKT FT TVVIPPQNDVDVHANDLNFIAIANNGKLVGFNVLVGGGLAMTHGDTATYPRRADDFGFV FT PLEKTLEVAAAVVTTQRDWGNRSNRKNAKTKYTLDRVGVDVFKAEVEKRAGIQFEASRP FT YELTERGDRIGWVDGIDGKHHLALFIENGRLLDYPGKPLKTGVAEIAKIHQGDFRMTAN FT QNLIVAGVPAEQKDQIEQIAREHGLIDDGHSEQRKNSMACVAFPTCPLAMAEAERFLPE FT FVTEIEGVLKKHNLPEDDNIIFRVTGCPNGCGRAMLAEIGLIGKAPGRYNFHLGGNRSG FT TRVPKMYKENITDRQILSEIDELVGRWATERQENEGFGDFTIRAGIVDEVKVSKRDFYA FT " FT misc_feature 441400..441612 FT /gene="cysI" FT /locus_tag="VSAL_I0403" FT /note="HMMPfam hit to PF03460, Nitrite/Sulfite reductase FT ferredoxin-lik, score 1.7e-20" FT /inference="protein motif:HMMPfam:PF03460" FT misc_feature 441706..442185 FT /gene="cysI" FT /locus_tag="VSAL_I0403" FT /note="HMMPfam hit to PF01077, Nitrite and sulphite FT reductase 4Fe-4S do, score 1.7e-56" FT /inference="protein motif:HMMPfam:PF01077" FT misc_feature 442228..442446 FT /gene="cysI" FT /locus_tag="VSAL_I0403" FT /note="HMMPfam hit to PF03460, Nitrite/Sulfite reductase FT ferredoxin-lik, score 8.2e-18" FT /inference="protein motif:HMMPfam:PF03460" FT misc_feature 442627..442677 FT /gene="cysI" FT /locus_tag="VSAL_I0403" FT /note="PS00365 Nitrite and sulfite reductases FT iron-sulfur/siroheme-binding site." FT /inference="protein motif:ProSite:PS00365" FT CDS 442904..443665 FT /transl_table=11 FT /gene="cysH" FT /locus_tag="VSAL_I0404" FT /old_locus_tag="TVS0214" FT /product="phosphoadenosine phosphosulfate reductase" FT /EC_number="1.8.4.8" FT /db_xref="GOA:B6ELM6" FT /db_xref="InterPro:IPR002500" FT /db_xref="InterPro:IPR004511" FT /db_xref="InterPro:IPR011800" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:B6ELM6" FT /protein_id="CAQ78089.1" FT /translation="MPKLQLSELLSLNKVEQILRLAEINTELEQLTAQERVSWALDNLE FT GKPAVSSSFGIQAAVMLQLVTDVKSDTPVILTDTGYLFPETYQFIDTLTERLNLNLQVF FT TADETPMWQEARYGKLWEQGVDGLKHYNRLNKVQPMRRALDQLQVGVWFSGLRRDQSSS FT RSHLPILSIQNGVFKFLPVIDWSNQEVHYYLEEKGLPYHPLRDEGYLSVGDTHTTQKWE FT PGMKEEDTRFFGLKRECGLHEDDAEAEGSGI" FT misc_feature 443042..443563 FT /gene="cysH" FT /locus_tag="VSAL_I0404" FT /note="HMMPfam hit to PF01507, Phosphoadenosine FT phosphosulfate reductase, score 1.8e-71" FT /inference="protein motif:HMMPfam:PF01507" FT CDS complement(443742..444215) FT /transl_table=11 FT /locus_tag="VSAL_I0405" FT /old_locus_tag="TVS0215" FT /product="putative membrane protein" FT /note="Expression may be regulated by Fur" FT /db_xref="InterPro:IPR021302" FT /db_xref="UniProtKB/TrEMBL:B6ELM7" FT /protein_id="CAQ78090.1" FT /translation="MTMKKTLILSTLAIALTAAAPANAFLSSLFGGGDDEAKTEQAAAS FT NPLVGMLTDNLGISADQAAGGAGALLAMAGNGLSSSESSELNSMVPGLESLTGAIPGGL FT GGMISNMDSVKTAFSALGLDPALISKFTPLITQYLTSQDASSGLLDSLTSLWK" FT misc_feature complement(444129..444197) FT /locus_tag="VSAL_I0405" FT sig_peptide complement(444144..444215) FT /locus_tag="VSAL_I0405" FT CDS complement(444332..444952) FT /transl_table=11 FT /gene="fklB" FT /locus_tag="VSAL_I0406" FT /old_locus_tag="TVS0216" FT /product="FKBP-type peptidyl-prolyl cis-trans isomerase" FT /EC_number="5.2.1.8" FT /db_xref="GOA:B6ELM8" FT /db_xref="InterPro:IPR000774" FT /db_xref="InterPro:IPR001179" FT /db_xref="InterPro:IPR023566" FT /db_xref="UniProtKB/TrEMBL:B6ELM8" FT /protein_id="CAQ78091.1" FT /translation="MSEVKLETVEQRASYGIGLQMGQQLAQSGLEGLNVAAIAKGIATS FT LTGDMPEIEVDAINEALQALHMRAEETRAEASKAAAADGETFLADNALRSEVTVLESGL FT QYEVLTEGTGEIPTSDKTVRVHYHGMLTDGSVFDSSVERGQPAEFPVTGVIAGWVEALQ FT LMPVGSKWKLSIPQDLAYGERGAGAAIPPYAALVFEVELLDIL" FT misc_feature complement(444344..444619) FT /gene="fklB" FT /locus_tag="VSAL_I0406" FT /note="HMMPfam hit to PF00254, FKBP-type peptidyl-prolyl FT cis-trans isomeras, score 3.5e-43" FT /inference="protein motif:HMMPfam:PF00254" FT misc_feature complement(444407..444493) FT /gene="fklB" FT /locus_tag="VSAL_I0406" FT /note="PS00454 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 2." FT /inference="protein motif:ProSite:PS00454" FT misc_feature complement(444533..444580) FT /gene="fklB" FT /locus_tag="VSAL_I0406" FT /note="PS00453 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 1." FT /inference="protein motif:ProSite:PS00453" FT CDS 445092..445754 FT /transl_table=11 FT /locus_tag="VSAL_I0407" FT /old_locus_tag="TVS0217" FT /product="opacity-associated protein A" FT /function="This protein is required for efficient FT nasopharyngeal mucosal colonisation in Haemophilus FT influenzae" FT /db_xref="InterPro:IPR007340" FT /db_xref="InterPro:IPR013731" FT /db_xref="UniProtKB/TrEMBL:B6ELM9" FT /protein_id="CAQ78092.1" FT /translation="MNKKKKPNIKRPDFKVQLAVVQKKLEPIAARFSPFWDRLPAFHQK FT ALMVLLPVTLVLVLLPSGNQEVDSATVESISPTMIPADEMQRQTVSLNLEGLSEQEEAI FT RNAPSPYELEQEKSAEEITEVKTSPQERSAEKWHDYKIKEGDTLYQVFRKNNLSLTELN FT KVLKVEGADKPLSNVKKGQLFRFKLNTRGDLDIIQIEREGQAVMYFRMSDGNFGRSK" FT misc_feature 445191..445280 FT /locus_tag="VSAL_I0407" FT /note="HMMPfam hit to PF08525, Opacity-associated protein A FT N-terminal moti, score 1e-08" FT /inference="protein motif:HMMPfam:PF08525" FT misc_feature 445497..445751 FT /locus_tag="VSAL_I0407" FT /note="HMMPfam hit to PF04225, Opacity-associated protein A FT LysM-like domai, score 9.5e-50" FT /inference="protein motif:HMMPfam:PF04225" FT CDS complement(445766..446635) FT /transl_table=11 FT /locus_tag="VSAL_I0408" FT /old_locus_tag="TVS0218" FT /product="integral membrane protein" FT /db_xref="GOA:B6ELN0" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:B6ELN0" FT /protein_id="CAQ78093.1" FT /translation="MTQLKPQISPTNMAILLLVLGNLMASLSDVAVKVLEGGVSPFQYI FT FIRQLVSLALIFPFWIKQPSAERQISNIKMTAIRAHVVLIGSGCMVVSITYLSLATANA FT IFYTAPLIMIPLSMLLLKEKPSTKKIIQTLIGFLGVLIILRPSQFHWAAIFALGTAITL FT ALFNILIRRIPSEQSVITTLLWTTLLSLPVSGTLAFLYWQPLTLHAFFWVALSASCIIT FT YNGLATMAYKKAPATQISLAEYSGLIFVVLFGVWWFDEVPDSLTLVGIGLIIFPLMPKA FT WLKNLRGK" FT misc_feature complement(order(445787..445846,445862..445921, FT 445955..446023,446033..446101,446126..446185, FT 446195..446248,446273..446326,446339..446392, FT 446453..446512,446540..446599)) FT /locus_tag="VSAL_I0408" FT misc_feature complement(446201..446569) FT /locus_tag="VSAL_I0408" FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 2e-16" FT /inference="protein motif:HMMPfam:PF00892" FT sig_peptide complement(446543..446635) FT /locus_tag="VSAL_I0408" FT CDS complement(446635..447087) FT /transl_table=11 FT /locus_tag="VSAL_I0409" FT /old_locus_tag="TVS0219" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6ELN1" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6ELN1" FT /protein_id="CAQ78094.1" FT /translation="MIQWQKIPFSKLTTPQLYDLLRLRVDVFVVEQTCPYPELDGKDCV FT DGVYHLIGIKNNEMVACARLLPPGTSYDHVSIGRVATKESARGHGFGHQLLSEALLHCE FT ELWPGETIDIGAQEHLTHFYQKHGFTVISDMYLEDDIPHVDMRLEK" FT misc_feature complement(446698..446937) FT /locus_tag="VSAL_I0409" FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 1.3e-11" FT /inference="protein motif:HMMPfam:PF00583" FT CDS complement(447153..447725) FT /transl_table=11 FT /locus_tag="VSAL_I0410" FT /old_locus_tag="TVS0220" FT /product="putative DNA-binding protein" FT /db_xref="GOA:B6ELN2" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018490" FT /db_xref="UniProtKB/TrEMBL:B6ELN2" FT /protein_id="CAQ78095.1" FT /translation="MLNDFIHRLQCYDFTAKEIEVLISKTKQTQLASKQIIIKQDDMTD FT NLYFLIDGICHASYLTEHGKQFSKEFYWQGDWIICFESLVNNQTSPYTLETITPVTLLS FT IPISFLKTWRAQSHPFYLQLLETQLMYKEKKERFMLLYSPQEKYQIFCQTYPALIEKLT FT DYQIAAYLGITHISLSRIKGRIKNKLT" FT misc_feature complement(447177..447242) FT /locus_tag="VSAL_I0410" FT /note="Predicted helix-turn-helix motif with score FT 1314.000, SD 3.66 at aa 162-183, sequence FT LTDYQIAAYLGITHISLSRIKG" FT misc_feature complement(447369..447644) FT /locus_tag="VSAL_I0410" FT /note="HMMPfam hit to PF00027, Cyclic nucleotide-binding FT domain, score 1.3e-10" FT /inference="protein motif:HMMPfam:PF00027" FT CDS complement(447735..449507) FT /transl_table=11 FT /locus_tag="VSAL_I0411" FT /old_locus_tag="TVS0221" FT /product="hemolysin" FT /db_xref="GOA:B6ELN3" FT /db_xref="InterPro:IPR002123" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6ELN3" FT /protein_id="CAQ78096.1" FT /translation="MVTSPFRLPRVTPFGLGESFAEWVTGLNRLDTHYQERPKGLNSFE FT FMRYTLQCLDVTYDIHQGELDSIPTTGPVVIVANHPLGALEGVILAEMVGRVRPDVKVL FT ANEYLKQIPEISELFIGVDVFETKQAKKTNANALREAHQHLANNGVLIIFPAGEVSTYN FT KETKLLSDKRWSYSATKFIQKHNATTVPIYIDGRNSHTFYLAGKIHPLLRTLMLGREML FT NKKENTINLSIGNPISHKELSGFNSPIETINYLRLNTYLLATNTDQTPQPEVKATALSP FT IMPAINADILEKEIHGLPESAKLLEQSGLAVYCTKSQFIPAVIQEIGRIREVTFRDVGE FT GTGLSCDLDEYDTHYYHLFIWHQENKEIVGSYRLGLVDELIEEFGLDGLYSRSLFNYQQ FT PFINTLHNSIEVGRSVVAKKYQRNVSSLLLLWKGISTFVYQRPQYTHLFGPVSISNDYS FT LSARQLIASTLTIHHYDNEKAALVSATTPLKPIIKKVWNGDMLSLLGDLKLLSKVLSRI FT EKGKGLPVLLRQYIGLNGKLICFNVDPDFNDALDGLIVVDMSNVPHKTLSKYMGKEEAM FT CYLEKHNRNNIHSK" FT misc_feature complement(448923..449333) FT /locus_tag="VSAL_I0411" FT /note="HMMPfam hit to PF01553, Acyltransferase, score FT 3.7e-06" FT /inference="protein motif:HMMPfam:PF01553" FT CDS complement(449511..449969) FT /transl_table=11 FT /locus_tag="VSAL_I0412" FT /old_locus_tag="TVS0222" FT /product="membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6ELN4" FT /protein_id="CAQ78097.1" FT /translation="MMKEKLLKYGPSVFIAFVFIQSLFFKFTGSYETDHIFGVLAEWSG FT ITWFGVNGGYLIGTAELIASLLLFTRFHGLGAIMTVGIMSGAIFFHLFTPLGIQMPEFN FT SVGNIIGYDGGLLFGMACLVWLCGVFLSVRDLKSDNGFLALLLNSKGI" FT misc_feature complement(order(449577..449645,449688..449756, FT 449769..449837,449895..449951)) FT /locus_tag="VSAL_I0412" FT CDS complement(450040..450465) FT /transl_table=11 FT /locus_tag="VSAL_I0413" FT /old_locus_tag="TVS0223" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR007029" FT /db_xref="UniProtKB/TrEMBL:B6ELN5" FT /protein_id="CAQ78098.1" FT /translation="MIMKKLLCLFMLIFSQSSFASDAIYTGFFSNKAIDGYDSVSYFTA FT EKPLKGSSEFVTSYMDADWYFVSQENLNLFTANPTKYAPQYGGFCAWAVAEKNDRAPGD FT PNQFSIVDGKLYLNYDAGVKTLWEKDIQGFITQGDKN" FT misc_feature complement(450208..450339) FT /locus_tag="VSAL_I0413" FT /note="HMMPfam hit to PF04945, YHS domain, score 9.4e-05" FT /inference="protein motif:HMMPfam:PF04945" FT CDS complement(450478..451224) FT /transl_table=11 FT /locus_tag="VSAL_I0414" FT /old_locus_tag="TVS0224" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR008551" FT /db_xref="UniProtKB/TrEMBL:B6ELN6" FT /protein_id="CAQ78099.1" FT /translation="MCTVSWFNTPTGYELFFNRDEQRSRSDALTPQVFQENNVDYIMPI FT DPVGGGSWISLNNHGISICLLNYYQGSTPPNNALSRGLLIKELATCHHIDSIQHVLSKM FT DFSHFASFTLLIFPSTASNENNTVKGFRWDGQSFDSITPISPMISSSVDAKSVIEHRLS FT VYKELTDSGVNRQTLNTFHQHHHVKLGHRSPCMHRQDAQTVSFTHIIVDNENNTLRYFS FT GSPCQTKKYLAYDVPFHSYNNTHSYS" FT CDS complement(451224..451832) FT /transl_table=11 FT /locus_tag="VSAL_I0415" FT /old_locus_tag="TVS0225" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ELN7" FT /protein_id="CAQ78100.1" FT /translation="MERRETTHSSISTDRLNKKEFLMPTLATQEVHQSPVISGCIDELT FT KGVTLLNLINDSDYIHLALPYVESSIGKHFRHILDLFQALIKKEPTEPINYNVRRRGHP FT IEKNKDIAITELNDTIDWLTHFPIEQLTSQVSLITEVCPYKKQDHIMLSSIEREITFAS FT LHASHHYALIKVITLSIGINTQSTFGFAPTTTTYLRGEA" FT CDS complement(451784..452914) FT /transl_table=11 FT /locus_tag="VSAL_I0416" FT /old_locus_tag="TVS0226" FT /product="hypothetical protein" FT /db_xref="GOA:B6ELN8" FT /db_xref="InterPro:IPR013815" FT /db_xref="UniProtKB/TrEMBL:B6ELN8" FT /protein_id="CAQ78101.1" FT /translation="MTNNTINTIAKGHINAGMPELESDTHRSVSPYEFLPSWFFYTPVV FT IQSFFLGLKHFDFTLPLIANPSIKLSGMVGESKHDILNLAGPIAQQWISPFTTITTTND FT PILQQTQNAIDEMNQHQLSFPVVAKPDLGCRGVGVKLIQSPKQLSDYFNSFPIHARFLI FT QEKAPYAAEAGIFYVRYPNEKKGNIISITLKYSPLVVGDGISTLKQLIENDSRAGQLAH FT LYLPRHEKKINMVLDEGKEFQLAFAGSHSRGSIFRDGNQYITDQLAERLDQIFNDLEGF FT HYGRLDVKFKDIQSLMKGDDFTILEINGASSEAAHIWDRNTPLKTIFSTLLLQYKILFE FT IGALQKKQGHHSPKIKELLAAWKEEKQLTLQYPPTD" FT CDS complement(452914..453504) FT /transl_table=11 FT /locus_tag="VSAL_I0417" FT /old_locus_tag="TVS0227" FT /product="membrane protein" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:B6ELN9" FT /protein_id="CAQ78102.1" FT /translation="MNDLVANIQEALFTSHSSELSIFVGIILLSYLLEDLAIVTAASLS FT AQEMVTPMIGLLAAFIGIASGDLGLYFLGRLSTRFRLLRYKTLTNAHLRYLRKKLQSNP FT MLNLFIIRFIPGLRTIGFTLSGVFHIRVLTFLTAVMSATAVWTALVFPSVYFLGSSSWI FT KASEHQWLLIPIMTLVLFATNRIAKKKISKELT" FT misc_feature complement(order(452944..452997,453034..453102, FT 453115..453183,453283..453351,453379..453447)) FT /locus_tag="VSAL_I0417" FT CDS 453631..454044 FT /transl_table=11 FT /locus_tag="VSAL_I0418" FT /old_locus_tag="TVS0228" FT /product="membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6ELP0" FT /protein_id="CAQ78103.1" FT /translation="MNKRFWLHLGTAIGLFGFFFIAAFVFHIYEVFYFFSFLAYGVLIF FT NLLSAIVYADQWFHYVLCSVLLIILGTFASIDVLSARDELLTNWIEAEWLGLTVKNSDD FT YIQVILILINIFTGSLAANTLFYGLCKKNSTVK" FT sig_peptide 453631..453792 FT /locus_tag="VSAL_I0418" FT misc_feature order(453643..453711,453721..453789,453802..453870, FT 453943..454011) FT /locus_tag="VSAL_I0418" FT CDS complement(454084..456066) FT /transl_table=11 FT /gene="cpdB" FT /locus_tag="VSAL_I0419" FT /old_locus_tag="TVS0229" FT /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase FT precursor" FT /EC_number="3.1.4.16" FT /db_xref="GOA:B6ELP1" FT /db_xref="InterPro:IPR004843" FT /db_xref="InterPro:IPR006146" FT /db_xref="InterPro:IPR006179" FT /db_xref="InterPro:IPR006294" FT /db_xref="InterPro:IPR008334" FT /db_xref="UniProtKB/TrEMBL:B6ELP1" FT /protein_id="CAQ78104.1" FT /translation="MENTMKLSIKPLSLAVLGGLLTLSGCTPAETNEVIKLRIVETTDI FT HTNLMDYDYYKDKPSQKIGLARTATLVKEARGEVINSVLVDNGDLLQGSPMGDYMADKG FT LEEGEVHPAYKAMNQLSYDAGNIGNHEFNYGLDFLAESINDANFPYINANVYDAKTKEH FT YFKPYIIKTHKFKDTAGVEHYIKVGYIGFVPPQIMVWDKKNLEGKVFVKDIIETANEII FT PQMKSEGADVIVAIPHSGVSTNPYKQGEENSTYYLSEVEGIDAIAFGHSHAVFPGKGFD FT NMQGIDNVNGTINGVAAVMPGRWGSHVGVMDLTLEQKDGKWIVAKSQAEARPIFDKENN FT KSLAAADEGIVKALEADHKGTREFVNQPIGKADDVMYSFLALVQDDPTVQIVNLAQKDY FT VERFIQGDPDLDGTPVLSAAAPFKAGGRGNDPTNFTEVESGQLTFRNAADLYLYPNTLV FT AMKVTGKEVKEWLECSAGQFKQIDINSTAPQQLIDWDGFRTYNFDVIDGVNYQINVTQP FT AKYDGDCNLINEGSERIIGLTYQGKPIDAKQDFLIATNNYRAYSGKFPGTGTDFIAFDS FT PDENRTVLASYISRVSKEEGQVQPSADNNWSFAPIEGGENLDIRFETSPTEKATQFIKD FT NGQYPMKQVATDDVGFAVYNINLSK" FT misc_feature complement(454360..454965) FT /gene="cpdB" FT /locus_tag="VSAL_I0419" FT /note="HMMPfam hit to PF02872, 5'-nucleotidase, C-terminal FT domain, score 3.2e-58" FT /inference="protein motif:HMMPfam:PF02872" FT misc_feature complement(455245..455958) FT /gene="cpdB" FT /locus_tag="VSAL_I0419" FT /note="HMMPfam hit to PF00149, Calcineurin-like FT phosphoesterase, score 8.7e-15" FT /inference="protein motif:HMMPfam:PF00149" FT misc_feature complement(455668..455703) FT /gene="cpdB" FT /locus_tag="VSAL_I0419" FT /note="PS00786 5'-nucleotidase signature 2." FT /inference="protein motif:ProSite:PS00786" FT sig_peptide complement(455974..456066) FT /gene="cpdB" FT /locus_tag="VSAL_I0419" FT misc_feature complement(455989..456021) FT /gene="cpdB" FT /locus_tag="VSAL_I0419" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 456434..457342 FT /transl_table=11 FT /gene="cysD" FT /locus_tag="VSAL_I0420" FT /old_locus_tag="TVS0230" FT /product="sulfate adenylyltransferase subunit 2" FT /EC_number="2.7.7.4" FT /db_xref="GOA:B6ELP2" FT /db_xref="InterPro:IPR002500" FT /db_xref="InterPro:IPR011784" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:B6ELP2" FT /protein_id="CAQ78105.1" FT /translation="MDAKRLTHLQQLEAESIHIIREVAAEFDNPVMMYSIGKDSSVMLH FT LARKAFYPGKIPFPLLHVDTDWKFKEMIEFRDKTAKKYGFDLLVHKNPEGIEMGISPFV FT HGSSKHTDIMKTQGLKQALNQHGFDAAFGGARRDEEKSRAKERVYSFRDKNHTWDPKNQ FT RPELWNTYNGQVNKGESIRVFPLSNWTELDIWQYIYLESIDIVPLYLAEKRPVVDRDGM FT LIMVDDERMELKEGEKIEYKDIRFRTLGCYPLTGAVESKANTLPEIIEEMLVATSSERQ FT GRAIDHDSSGSMEQKKRQGYF" FT misc_feature 456518..457204 FT /gene="cysD" FT /locus_tag="VSAL_I0420" FT /note="HMMPfam hit to PF01507, Phosphoadenosine FT phosphosulfate reductase, score 2.6e-135" FT /inference="protein motif:HMMPfam:PF01507" FT CDS 457371..458807 FT /transl_table=11 FT /gene="cysN" FT /locus_tag="VSAL_I0421" FT /old_locus_tag="TVS0231" FT /product="sulfate adenylyltransferase subunit 1" FT /EC_number="2.7.7.4" FT /db_xref="GOA:B6ELP3" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009001" FT /db_xref="InterPro:IPR011779" FT /db_xref="UniProtKB/Swiss-Prot:B6ELP3" FT /protein_id="CAQ78106.1" FT /translation="MNSAVEQELAELGIEAYLSQHQHKSMLRFLTCGSVDDGKSTLIGR FT LLHDSKQIYADQLEAVHADSQRVGTTGERPDLALLVDGLQAEREQGITIDVAYRYFSTQ FT KRKFIISDTPGHEQYTRNMATGASTCDVAVILIDARKGVLDQTRRHSYIANLLGIRHFV FT VAVNKMDLVDYSQSRFEEIKEEYVTFSKKLNNPNLDISILPLSALEGDNVVNHSAALAW FT YKGAPLLEVLEDIDIDADRGNGEFRFPVQYVNRPNLDFRGFSGSVSSGEIKVGDDIIAL FT PSGKKSKVARIVTFDGDLPSAQAGQAVTLTLEDEIDISRGDLLVKSTSNLTATDQFKAE FT IVWMTEKGLQPGRQYDIKIAGKKTVGQIDAIHHQVNINSLETFVTDELPLNGIGLCDVS FT LTEVVSLDRYQDCADTGGFIFIDRLTNVTVGAGMIQNLSELSDVAPINDNVSAFEVELN FT ALVRKHFPHWGAQDISKLLS" FT misc_feature 457440..458084 FT /gene="cysN" FT /locus_tag="VSAL_I0421" FT /note="HMMPfam hit to PF00009, Elongation factor Tu GTP FT binding domain, score 1.2e-69" FT /inference="protein motif:HMMPfam:PF00009" FT misc_feature 457467..457490 FT /gene="cysN" FT /locus_tag="VSAL_I0421" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 457614..457661 FT /gene="cysN" FT /locus_tag="VSAL_I0421" FT /note="PS00301 GTP-binding elongation factors signature." FT /inference="protein motif:ProSite:PS00301" FT misc_feature 458148..458345 FT /gene="cysN" FT /locus_tag="VSAL_I0421" FT /note="HMMPfam hit to PF03144, Elongation factor Tu domain, FT score 2.9e-10" FT /inference="protein motif:HMMPfam:PF03144" FT CDS 458830..460557 FT /transl_table=11 FT /locus_tag="VSAL_I0422" FT /old_locus_tag="TVS0232" FT /product="ion transporter superfamily protein" FT /db_xref="GOA:B6ELP4" FT /db_xref="InterPro:IPR001898" FT /db_xref="InterPro:IPR006037" FT /db_xref="UniProtKB/TrEMBL:B6ELP4" FT /protein_id="CAQ78107.1" FT /translation="MPWEQGFVLALLTLIIVSLLASKLKPSVIFAGSAFIAFMVGMIDL FT PSLAKNFTNSSLLTLVLLILSSCALEKTRLISWVGRYISEGRLGSVVGKLGLSTALLSS FT FTNNTAVVVSLIGAIKRNQRHAPSRLLIPLSYAAILGGTLTLIGTSTNLIINSFVEDAG FT LPSLSFFAPTAIGLVVLAGGLLILIPLSYLLPQYDDGSQDELPYFLEARVEGASPLVGK FT SISENNLRALRKLFLAEVIREGRTITSVDPDMILLAGDRLLFCGDIESVTTLQEINGLT FT LFGQHHLNGQNLIEVVVSQSASIRGKSIKSAHFRERFDAVVVAIRRGHERLEGGLGKIE FT LQAGDTLVLVPGKNFEQSKQQLKREFVIISDLDSAAKLDGDKSTFVLLGFASVIAAALL FT DVFPIIKGLSVYLLAMFAFGVVSLGELRRRFPIDIVVIVGAALSIAQLMLSSGLSVQLG FT DMFIELFNGWGVMGALIAVYLITLVLTELITNNAAAALAFPIGYSMALGYGVDPMPFIM FT AVLFGASASFISPYGYQTNLLVFSVGNYTLLDYVKVGLPMSIIYSVLVLSLIPHFFPF" FT sig_peptide 458830..458976 FT /locus_tag="VSAL_I0422" FT misc_feature order(458842..458895,458908..458976,459118..459186, FT 459223..459291,459334..459402,459976..460044, FT 460057..460110,460129..460197,460210..460278, FT 460291..460359,460372..460440,460477..460545) FT /locus_tag="VSAL_I0422" FT misc_feature 458851..460398 FT /locus_tag="VSAL_I0422" FT /note="HMMPfam hit to PF03600, Citrate transporter, score FT 9.5e-05" FT /inference="protein motif:HMMPfam:PF03600" FT misc_feature 458860..460548 FT /locus_tag="VSAL_I0422" FT /note="HMMPfam hit to PF06808, DctM-like transporters,score FT 7.5e-05" FT /inference="protein motif:HMMPfam:PF06808" FT misc_feature 459451..459666 FT /locus_tag="VSAL_I0422" FT /note="HMMPfam hit to PF02080, TrkA-C domain, score FT 1.3e-11" FT /inference="protein motif:HMMPfam:PF02080" FT misc_feature 459475..459498 FT /locus_tag="VSAL_I0422" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 459706..459921 FT /locus_tag="VSAL_I0422" FT /note="HMMPfam hit to PF02080, TrkA-C domain, score FT 1.1e-10" FT /inference="protein motif:HMMPfam:PF02080" FT CDS 460572..461204 FT /transl_table=11 FT /gene="cysC" FT /locus_tag="VSAL_I0423" FT /old_locus_tag="TVS0233" FT /product="adenylylsulfate kinase" FT /EC_number="2.7.1.25" FT /db_xref="GOA:B6ELP5" FT /db_xref="InterPro:IPR002891" FT /db_xref="UniProtKB/TrEMBL:B6ELP5" FT /protein_id="CAQ78108.1" FT /translation="MTTEQTKERQVVNDENVVWHQYSVTKETRSGLKKQKPVVLWFTGL FT SGAGKSTIAGALEVKLAELGYHTYLLDGDNVRHGLCKDLGFSDHDRQENIRRIGELAKL FT MSDAGLIVLSAFISPHRAERQIVRELLPENEFLEVFVNTSLDECEKRDPKGLYKKARAG FT EIKHFTGIDSDYEQPLNPDIDLLAGTQSIDELVEQCLAVLKEKNIIQ" FT misc_feature 460677..461147 FT /gene="cysC" FT /locus_tag="VSAL_I0423" FT /note="HMMPfam hit to PF01583, Adenylylsulphate FT kinase,score 1.2e-108" FT /inference="protein motif:HMMPfam:PF01583" FT misc_feature 460701..460724 FT /gene="cysC" FT /locus_tag="VSAL_I0423" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(461248..462144) FT /transl_table=11 FT /locus_tag="VSAL_I0424" FT /old_locus_tag="TVS0234" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR021254" FT /db_xref="UniProtKB/TrEMBL:B6ELP6" FT /protein_id="CAQ78109.1" FT /translation="MDNKKNVIVNDAQNSKEKATHKKEHYVVSSERRLKEIAIKQGLGA FT KLQAPKPEETLLKRALYREKLLREQQQNNLEQIIKYAHGYCSDETAGDPDPDWLHRFFE FT MAKDIHDPSMQRLWSQIFKQEVVSPGATSMKALKVLKDMTQREAQTFQRAASLACSFGQ FT DNSKKLLLGYKCAGTLFTFYKTEGPQLIHLGNYKLPYSSLLLLIDLGLLLGTELESGEI FT EFEPALPLHYQGKQLAIKPMQKGSRLIYYRFSPTGAELCKLLGNKPNDSYYDSLTGLLS FT QKFMVETDVKTSISTMV" FT CDS complement(462468..462953) FT /transl_table=11 FT /locus_tag="VSAL_I0425" FT /old_locus_tag="TVS0235" FT /product="putative exported protein" FT /db_xref="InterPro:IPR021727" FT /db_xref="UniProtKB/TrEMBL:B6ELP7" FT /protein_id="CAQ78110.1" FT /translation="MKKKLLLCLLLLLPFSAFSDEVLKLDWIDLVPEQERHQFDAIGMP FT KVNHNGAQMQQSLVGGVRQELNGSMVKIPGFVIPLEGDDKMITEFLLVPYFGACIHVPP FT PPPNQIIYVKFKKGAPIQQLWDVVYIVGTLKTETIDSELAETGYLIDGVRLEEYDDE" FT sig_peptide complement(462897..462953) FT /locus_tag="VSAL_I0425" FT CDS complement(462963..464222) FT /transl_table=11 FT /locus_tag="VSAL_I0426" FT /old_locus_tag="TVS0236" FT /product="predicted permease" FT /db_xref="GOA:B6ELP8" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:B6ELP8" FT /protein_id="CAQ78111.1" FT /translation="MVGILQLAWKSLKNRKTTVLLTVATIAISVMLLVGVERIRTQAKT FT SFANTISNTDLIVGARSGQVNLLLYSVFRIGNATNNIDWKSYQEIISQRAVKWSIPISL FT GDSHKGFRVMGTNQDYFRFYQYGKKQPLAFKEGKPFDDLFDVVLGADVAQKLNYHLGDK FT LVIAHGISDKSFTRHDKLPFTVVGILKPTGTPVDKTLHVSLGAISAIHVGWESGAHLGN FT TPDAKILEKQKFEPTEITAFMLGLKSKIQTFALQRYINDYTKEPLSAILPGIALHELWG FT MMSVAEQALLAVSIFVVAAGLMGMLTSLLTSLQERRREMAILRAMGAQPKHIFILLVSE FT AVVITSFGIIVGLIGLYLSLSILQPIIQQYYGIAIELTLPTLYELKLLALVLCSGFIIG FT VIPAIQAYRHSLSDGMTIRL" FT misc_feature complement(462990..463508) FT /locus_tag="VSAL_I0426" FT /note="HMMPfam hit to PF02687, Predicted permease, score FT 6.9e-27" FT /inference="protein motif:HMMPfam:PF02687" FT misc_feature complement(order(462996..463064,463158..463226, FT 463284..463352,464115..464168)) FT /locus_tag="VSAL_I0426" FT misc_feature complement(464085..464135) FT /locus_tag="VSAL_I0426" FT /note="PS00358 Ribosomal protein L5 signature." FT /inference="protein motif:ProSite:PS00358" FT sig_peptide complement(464121..464222) FT /locus_tag="VSAL_I0426" FT CDS complement(464216..464905) FT /transl_table=11 FT /locus_tag="VSAL_I0427" FT /old_locus_tag="TVS0237" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:B6ELP9" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:B6ELP9" FT /protein_id="CAQ78112.1" FT /translation="MNIIELSDLTFHWPNQKELTINIPFFSQKQGNKLFIKGPSGSGKS FT TLLSLLTGIVSPTSGSVIINGTDINHLSSNQRDRFRADNIGYIFQQFNLLPYLSVIDNV FT VLPYQFSSKSKLSKKELRQEAERLLTQLQLPRSHFDRPITDLSIGQQQRVAAARAFIGK FT PTLIIADEPTSALDHETRFAFIKLLMNECENSQASLLFVSHDPSLESLFDQSIDLRTLN FT TAGEYSW" FT misc_feature complement(464249..464815) FT /locus_tag="VSAL_I0427" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.9e-50" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(464771..464794) FT /locus_tag="VSAL_I0427" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(464942..465583) FT /transl_table=11 FT /locus_tag="VSAL_I0428" FT /old_locus_tag="TVS0238" FT /product="putative exported protein" FT /db_xref="InterPro:IPR021253" FT /db_xref="UniProtKB/TrEMBL:B6ELQ0" FT /protein_id="CAQ78113.1" FT /translation="MLIRNKKILLSLAISSSLFSISNASNANTHDHAHDGDQQHESEHR FT HHDAHVHGVVETNIAQDGDHLLFEITAPGADVVGFEHAPKDDTQKRILSEAVKTLNNPS FT VIFTLPAEAKCTLEEAHVSHNLTPHDHDHDHDHDHDHDQHDGEHHKEHSKHGEFNAQYE FT YHCEAISKLDNIETQWFTHFTHTQKMTIQYLGDAGQKADTLTPNSPIITL" FT sig_peptide complement(465503..465583) FT /locus_tag="VSAL_I0428" FT CDS complement(465635..465925) FT /transl_table=11 FT /locus_tag="VSAL_I0429" FT /old_locus_tag="TVS0239" FT /product="membrane protein" FT /db_xref="InterPro:IPR019731" FT /db_xref="UniProtKB/TrEMBL:B6ELQ1" FT /protein_id="CAQ78114.1" FT /translation="MQSYFFTKQRWLNWSLVILLALFGILVANHQIDTNIQHHENHHCQ FT MFHSIGSGITAHVASLPIIPQLIISSTFTSVENSNPSSITVHSRAPPFSIL" FT misc_feature complement(order(465719..465787,465845..465898)) FT /locus_tag="VSAL_I0429" FT sig_peptide complement(465842..465925) FT /locus_tag="VSAL_I0429" FT CDS complement(465991..466542) FT /transl_table=11 FT /locus_tag="VSAL_I0430" FT /old_locus_tag="TVS0240" FT /product="putative exported protein" FT /db_xref="InterPro:IPR006513" FT /db_xref="InterPro:IPR012336" FT /db_xref="UniProtKB/TrEMBL:B6ELQ2" FT /protein_id="CAQ78115.1" FT /translation="MKKITLLTLAACLLPTLGFAHNITLNKTVPTVSIDNYGEIFFEDS FT AATYQPWDSEQLKGKVRVLQAIAGRSSAKAMNTELMSAITLEKFPETQYQTTTIINQDD FT SIWGTGGFVKSSAEESKEEFSWSSMVLDENGTAAKTWDLQPESSAIIVQNKEGNVLFVK FT EGKLTSDEIKQVISLIHAQL" FT sig_peptide complement(466483..466542) FT /locus_tag="VSAL_I0430" FT CDS 466791..467000 FT /transl_table=11 FT /locus_tag="VSAL_I0431" FT /old_locus_tag="TVS0242" FT /product="conserved hypothetical protein" FT /note="Expression may be stress-induced" FT /db_xref="InterPro:IPR009491" FT /db_xref="UniProtKB/TrEMBL:B6ELQ3" FT /protein_id="CAQ78116.1" FT /translation="MFRNFKAYRPLQVARFVKTLFKGQIHIEGVGTFDFDEGKILMPSL FT ENKRMLSVMSEVNQHIRQLSLMPA" FT misc_feature 466794..466997 FT /locus_tag="VSAL_I0431" FT /note="HMMPfam hit to PF06526, Protein of unknown function FT (DUF1107), score 3.9e-30" FT /inference="protein motif:HMMPfam:PF06526" FT CDS complement(467069..467719) FT /transl_table=11 FT /gene="msrA" FT /locus_tag="VSAL_I0432" FT /old_locus_tag="TVS0243" FT /product="peptide methionine sulfoxide reductase MSRA" FT /EC_number="1.8.4.11" FT /db_xref="GOA:B6ELQ4" FT /db_xref="InterPro:IPR002569" FT /db_xref="UniProtKB/TrEMBL:B6ELQ4" FT /protein_id="CAQ78117.1" FT /translation="MVIYSFYRVAQGKCLLNYSVKGCDMTMEKHTVQPLHFISQHDIES FT IPTGCEQILFGMGCFWGTERLFWKLTGVYSTAVGYSGGKTKIPTYKDVCSGSTDHVEVV FT KVVFNPALISLEELLHSFWQTHNPTQGMRQGNDIGTQYRSVIYTYDKNQQEIATHTKKQ FT YQHALSQQGIEEPITTEITPANDFYFAEEYHQQYLAKNPNGYCGLSGTGVCFL" FT misc_feature complement(467087..467569) FT /gene="msrA" FT /locus_tag="VSAL_I0432" FT /note="HMMPfam hit to PF01625, Peptide methionine sulfoxide FT reductase, score 1.9e-96" FT /inference="protein motif:HMMPfam:PF01625" FT CDS 467761..469482 FT /transl_table=11 FT /locus_tag="VSAL_I0433" FT /old_locus_tag="TVS0244" FT /product="surface antigen protein" FT /db_xref="GOA:B6ELQ5" FT /db_xref="InterPro:IPR000184" FT /db_xref="UniProtKB/TrEMBL:B6ELQ5" FT /protein_id="CAQ78118.1" FT /translation="MTKKLSLFFTFCLFAISSNVSAETELDIEGLEGSLLSNVEAYISG FT IPEEDYSVSLRFQARLEESTTDALKALGYYQPVITFTIEGEKSKHTLIMTVEEGEPVVI FT YVSDIVITGEARNDIDFTNAVDSSGLNLGQVLNHGRYESLKSTLQNLALRKGYFDGEFS FT VSRLEVAPGRHQAMVRLRYDSGKRYSFGETTIDGSQVEEKRVRSIIPFEPGDPYLASLV FT GDLNQSLSNTEWFSSVYVEPDLDAVGETHQLPMKVHVSPQVRNQLETSIGYSTDVGARG FT KIRWKNPWLNKYGHSLDTALSISKPEQEARISYKIPLEQVLKDYYIVKYGLKNVDNRDT FT DSLESNLAFERHWVYDSGWHRTIYTRFLYEEFTQGIQDGTAWLVLPGISFSKSRTRGGT FT MPMWGDKKAFTIEGTDEALTSDVRMLRLQAQGAIVRSIGENHRGVARADIGAIYTDDFY FT KLPPSIRFFAGGDNSIRGYGYEEVSPKDSSGYLTGGQFMATTSLEYQYRVVGNWWLATF FT IDYGDAWITTPDWKTGAGLGIRWASPVGPVRLDFAWGFDAEPGDEFKIHFTLGPEV" FT sig_peptide 467761..467826 FT /locus_tag="VSAL_I0433" FT misc_feature 468322..468546 FT /locus_tag="VSAL_I0433" FT /note="HMMPfam hit to PF07244, Surface antigen variable FT number repeat, score 5.6e-05" FT /inference="protein motif:HMMPfam:PF07244" FT misc_feature 468625..469479 FT /locus_tag="VSAL_I0433" FT /note="HMMPfam hit to PF01103, Surface antigen, score FT 5.4e-76" FT /inference="protein motif:HMMPfam:PF01103" FT misc_feature 469267..469305 FT /locus_tag="VSAL_I0433" FT /note="PS00213 Lipocalin signature." FT /inference="protein motif:ProSite:PS00213" FT CDS 469479..473276 FT /transl_table=11 FT /locus_tag="VSAL_I0434" FT /old_locus_tag="TVS0245" FT /product="putative membrane protein" FT /note="Similar to Vibrio fischeri Hypothetical outer FT membrane protein UniProt:Q5E818 (1266 aa) fasta scores: FT E()=0, 72.874% id in 1176 aa" FT /db_xref="InterPro:IPR007452" FT /db_xref="UniProtKB/TrEMBL:B6ELQ6" FT /inference="similar to sequence:UniProt:Q5E818" FT /protein_id="CAQ78119.1" FT /translation="MSSLSVNEEQNKPQLKKKRRFSRYCICLALFVPTIILMILLLIGA FT LVFTNSGLKLIIWGAEKAVPELSIKNIDGSLIPEFTLSEVKYHNDDLLNADISRFHFGL FT TAKCLLVPSLCIDDITIDGLVLDFPQLPTSPEDEATKAPTNNELLSIPIPINITKISIN FT NIDATVLGNRIQWDSFSTGIKIYKSDLTITPLQWNRINLQLAESEKEKTKSKAPADKVS FT DTPIVLPDVYVPLNIKVEQFSLRDFVLQQEALVKINQLDFKANIGENDIKVNDFYLDTP FT QANLSLDNEISLQGDYPLTLNANAVIKETELKGHKVTIIAKGSVANLEASLNLTGGLKA FT NVEANIHPLETTLPFDVHVYKTELYWPLSGVKEFKVSVPNIKAEGDLNQYKFASALYIE FT GKTIPQTDLRLEGKGNLEKVELYDFMADTLGGSISGSAEADWASLVHWKADVHLQNIQP FT GLQWPEAEGDISGELVTSGSLTKEGGWKVTVPTIDINGIFREYPLIIEGSLKADDVKGL FT GEPYLEVAQLTLHHGDNGLTISGSLDKEWDLNVDIDFPELSDSVPDVHGQLMGNVALTG FT KVTEPKINVDINAVELQLPQKTTLNKASIKGYVVPMPAIDADLSIKLLGGKYKKQTLKD FT LVVRFSGKEHNHKLQIDLDSNVIQSHLLFNGSLERKKGWKGELSKADVVTEIGPWKLDK FT KASLAYDIQKQELFVQANCWSQGKTSLCLNKDLVAGNSGSADVSIKHFEFSKIKKFLPE FT ETNINGEVNLDALAKWAVGKPPYVKASLYLPKGNIEQEMETPLIVGWDKVNVNAEMKND FT ELKSDWLIALTNNGELKGEMTVNQLTGSKKLNGYSNINTVSLAMLEPILGEYSQLEAMV FT NSSIKVSGPIEHPKLFGDLSVDKIKVKGEISPVDISNGNINILFGGHSGKLTSLITTSD FT GDLHLKGFGDWSALDAWKAGLDVFGNELQVNVPPMVKLKVKPDMKIRVIPTLAKITGSI FT EIPWGRIVVKDLPESAIGVSKDEIILGDNLKPIESNTSLPMAVETDIDLSIGDDVLLSA FT FGLEGGLVGKLNITQKNKGPFISGEINIEDGTYRSFGQDLQITKGKILFNGPADQPYVD FT IEAIRNPDNTKDDVVAGVKVNGPADTPKVEIFSSPSMPQANALSYLLRGQDIDSDSGGN FT AMTTTLIGLSLAKSGKVVGEIGKAFGVQDLQLDTAGSGGDSQVTISGYIAPDLQVKYGV FT GIFNSLGEFTLRYRIVSDLYIEAISGLDNAVDLIYQFEFN" FT sig_peptide 469479..469625 FT /locus_tag="VSAL_I0434" FT misc_feature 469554..469622 FT /locus_tag="VSAL_I0434" FT misc_feature 470661..470684 FT /locus_tag="VSAL_I0434" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 472233..473000 FT /locus_tag="VSAL_I0434" FT /note="HMMPfam hit to PF04357, Family of unknown function FT (DUF490), score 5.9e-43" FT /inference="protein motif:HMMPfam:PF04357" FT rRNA 473821..475357 FT /locus_tag="VSAL_I3107r" FT /product="16S ribosomal RNA" FT rRNA 475688..478578 FT /locus_tag="VSAL_I3108r" FT /product="23S ribosomal RNA" FT rRNA 478672..478791 FT /locus_tag="VSAL_I3109r" FT /product="5S ribosomal RNA" FT rRNA 479198..480734 FT /locus_tag="VSAL_I3110r" FT /product="16S ribosomal RNA" FT tRNA 480806..480879 FT /locus_tag="VSAL_I3111t" FT /product="transfer RNA-Ile" FT tRNA 480922..480994 FT /locus_tag="VSAL_I3112t" FT /product="transfer RNA-Ala" FT rRNA 481267..484157 FT /locus_tag="VSAL_I3113r" FT /product="23S ribosomal RNA" FT rRNA 484251..484370 FT /locus_tag="VSAL_I3114r" FT /product="5S ribosomal RNA" FT tRNA 484466..484539 FT /locus_tag="VSAL_I3115t" FT /product="transfer RNA-Asp" FT repeat_region 484654..486965 FT /note="VSa2" FT repeat_region 484654..484677 FT /note="IR of VSa2" FT CDS 484735..485046 FT /transl_table=11 FT /locus_tag="VSAL_I0435" FT /old_locus_tag="TVSa0112" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EKJ3" FT /protein_id="CAQ78120.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPATEPHWIGLLLKGYQS" FT CDS 485043..485390 FT /transl_table=11 FT /locus_tag="VSAL_I0436" FT /old_locus_tag="TVSa0113" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78121.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 485462..486949 FT /transl_table=11 FT /locus_tag="VSAL_I0437" FT /old_locus_tag="TVSa0114" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EHG8" FT /protein_id="CAQ78122.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 486942..486965 FT /note="IR of VSa2" FT repeat_region complement(487011..488141) FT /note="VSa1" FT repeat_region complement(487011..487029) FT /note="IR of VSa1" FT CDS complement(join(487024..487656,487704..487934, FT 487934..488119)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0438" FT /old_locus_tag="TVS0262" FT /product="transposase (fragment)" FT /note="Similar to Shewanella oneidensis issod7,transposase. FT UniProt:Q8CM19 (EMBL:AE014299) (440 aa) fasta scores: FT E()=5e-36, 44.241% id in 382 aa. CDS contains frameshifts FT and is truncated by the insertion of the upstream IS FT element and subsequent recombination events" FT /db_xref="PSEUDO:CAQ78123.1" FT /inference="similar to sequence:UniProt:Q8CM19" FT repeat_region 488142..489402 FT /note="VSa11" FT CDS 488216..488527 FT /transl_table=11 FT /locus_tag="VSAL_I0439" FT /old_locus_tag="TVS0263" FT /product="transposase" FT /db_xref="GOA:B6ELR1" FT /db_xref="InterPro:IPR002514" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:B6ELR1" FT /protein_id="CAQ78124.1" FT /translation="MTKRIRRLFSTEFKLEAAQLVLDQNHSVAEVAKAMNVGKSTMDKW FT VRQLKNERLGKSPKESPITPEQIEIRELKKKLARLEEHNSILKKATALLMSDSLNNSH" FT misc_feature 488231..488476 FT /locus_tag="VSAL_I0439" FT /note="HMMPfam hit to PF01527, Transposase, score 2.7e-16" FT /inference="protein motif:HMMPfam:PF01527" FT misc_feature 488291..488356 FT /locus_tag="VSAL_I0439" FT /note="Predicted helix-turn-helix motif with score FT 1720.000, SD 5.05 at aa 26-47, sequence FT HSVAEVAKAMNVGKSTMDKWVR" FT CDS 488524..489393 FT /transl_table=11 FT /transl_except=(pos:488524..488526,aa:Met) FT /locus_tag="VSAL_I0440" FT /old_locus_tag="TVS0264" FT /product="transposase" FT /note="CDS contanins a rare Leucine start codon (TTA)" FT /db_xref="GOA:B6ELR2" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:B6ELR2" FT /protein_id="CAQ78125.1" FT /translation="MIEKLKQSYSISIICKVFDIHRSSYKYWREHLKEMIAEQVILRSE FT VRAAHTARNGSAGARSIADILTNKGIKLSRYRASKLMKELEIVSCQIPKHKYNNEVKEH FT IEIPNKLNRKFAATAPNKVWCGDVTYIWIGSRWAYLAIVMDLFSRKPIGWAMSLSPDST FT LTGKALSMAFESRGRPKNVMFHSDQGCHYTSRQFRQLLWRYQIDQSLSRRGNCWDNSPM FT ERFFRSLKSEWISKVGYRNVVEAKINIINYITSYYSTVRPHQYNGGLTPNESERIFWLN FT SKAVASFT" FT misc_feature 488869..489351 FT /locus_tag="VSAL_I0440" FT /note="HMMPfam hit to PF00665, Integrase core domain,score FT 9.2e-44" FT /inference="protein motif:HMMPfam:PF00665" FT CDS complement(489668..490945) FT /transl_table=11 FT /locus_tag="VSAL_I0441" FT /old_locus_tag="TVS0265" FT /product="sodium/proton antiporter" FT /db_xref="GOA:B6ELR3" FT /db_xref="InterPro:IPR006153" FT /db_xref="InterPro:IPR018421" FT /db_xref="InterPro:IPR018422" FT /db_xref="UniProtKB/TrEMBL:B6ELR3" FT /protein_id="CAQ78126.1" FT /translation="MSVYNTLCFLAAGAMLIAFFNSKIGKMQTTIAITAGSIMLSLAII FT IAGHNGWFHLREIATETLTEINFEDFLLKGILGFLLFAGGLGIKLPHMKDQKWEITVLA FT LGATLFSTFFIGFALWFICGFIGINFDLIYCLLFGALISPTDPIAVLAIVKKMNAPQRI FT STQIEGESLFNDGFGLVIFVTLFTIAFGNETPTIGSVTSLFFQEAIGGIIYGFVLGLVF FT HYLISSTNDHSMELLLTIGIPTAGYALADVIHVSGPLSMVVAGIMIGNWTRFIGFSKES FT EEHLDHFWELVDEFLNGVLFLLIGMSMLLFKFHQEDWILMAISIPLVLTSRYLSVYVSY FT IGFKRFRTYNPLSVKILTWGGLRGGLALAMALAIPSGIMVIPDKNIDVREIILVMTYSV FT VVFSILVQGSTITNMIEKAKLLEKNK" FT misc_feature complement(489695..490927) FT /locus_tag="VSAL_I0441" FT /note="HMMPfam hit to PF00999, Sodium/hydrogen exchanger FT family, score 1.5e-51" FT /inference="protein motif:HMMPfam:PF00999" FT misc_feature complement(order(489707..489775,489803..489871, FT 489926..489994,490004..490063,490124..490192, FT 490268..490336,490373..490441,490484..490552, FT 490571..490639,490682..490750,490787..490855, FT 490883..490942)) FT /locus_tag="VSAL_I0441" FT sig_peptide complement(490868..490945) FT /locus_tag="VSAL_I0441" FT CDS 491126..494806 FT /transl_table=11 FT /gene="metH" FT /locus_tag="VSAL_I0442" FT /old_locus_tag="TVS0266" FT /product="methionine synthase" FT /EC_number="2.1.1.13" FT /db_xref="GOA:B6ELR4" FT /db_xref="InterPro:IPR000489" FT /db_xref="InterPro:IPR003726" FT /db_xref="InterPro:IPR003759" FT /db_xref="InterPro:IPR004223" FT /db_xref="InterPro:IPR006158" FT /db_xref="InterPro:IPR011005" FT /db_xref="InterPro:IPR011822" FT /db_xref="UniProtKB/TrEMBL:B6ELR4" FT /protein_id="CAQ78127.1" FT /translation="MAGSMIKNQIEKQLLERILLIDGGMGTMIQEYKFEENDYRGERFI FT DWHCDLKGNNDLLVLSNPSVIRDIHLAYLEAGADILETNTFNATTIAMADYDMESLSAE FT INFEAAKLARKAADEWTLKTPHKPRYVAGVLGPTNRTCTLSPDVNDPGFRNVTFDGLVK FT AYSESTRALIKGGSDLILIETIFDTLNAKACSFAVESVFEEMGITLPVMISGTITDASG FT RTLSGQTTEAFYNALRHVKPISFGLNCALGPDELREYVGELSRISECSVSAHPNAGLPN FT AFGEYDLSPEEMAEHVAEWARSGFLNLIGGCCGTTPEHIRQMAAAVEGVKPRVLPDIPV FT ACRLSGLEPLTISKESLFVNVGERTNVTGSARFKRLIKEELYDEALSVAREQVENGAQI FT IDINMDEGMLESEACMVRFLNLCASEPEISKVPVMVDSSKWEVIEAGLKCIQGKGIVNS FT ISLKEGKEKFVEQAKLVRRYGAAVIVMAFDEKGQADTRERKIEICTNAYNILVNEVGFP FT PEDIIFDPNIFAIATGIDEHNNYAVDFIEAVADIKRTLPHAMISGGVSNVSFSFRGNNY FT VREAIQAVFLYHCFKHGMDMGIVNAGQLEIYDNVPEELREAVEDVVLNRRDDSTERLLD FT IATAYLEKAVGKVEDKSALEWRTWTVEKRLEHSLVKGITDFIVDDTEEARVNSERPIHV FT IEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAHLEPFINATKDVGSTNGKILL FT ATVKGDVHDIGKNIVGVVLQCNNYEIIDLGVMVSCEKILKVAKEENVDIIGLSGLITPS FT LDEMVHVAKEMERQGFTVPLLIGGATTSKAHTAVKIEQNYSQPVVYVNNASRAVGVCTS FT LLSNELKPAFIEKLDLDYDRVRDQHNRKIPRTKPITLERARANKVDIDWVSYTPPTPMK FT PGVHIIDDVDIATLRKYIDWTPFFMTWSLMGKYPAILEHDEVGEEAKRLYKDANDLLDR FT VDTEGLLKARGMCALFPAAGIGDDIEVYSDESRTTVVKVLHNLRQQTAKPKGFNYCLSD FT YIAPKESGKKDWIGGFAVTGGIGERDLADAYKANGDDYNAIMIQAIADRLAEGFAEYLH FT EKVRKEIWGYATDENLANDELIREKYQGIRPAPGYPACPEHTEKGALWELMKIEESIGM FT SLTSSYAMWPGASVSGMYFSHPDSRYFAIAQIQKDQAESYAERKGWDMLEAEKWLGPNL FT N" FT misc_feature 491177..492112 FT /gene="metH" FT /locus_tag="VSAL_I0442" FT /note="HMMPfam hit to PF02574, Homocysteine FT S-methyltransferase, score 3.3e-151" FT /inference="protein motif:HMMPfam:PF02574" FT misc_feature 492197..492844 FT /gene="metH" FT /locus_tag="VSAL_I0442" FT /note="HMMPfam hit to PF00809, Pterin binding enzyme,score FT 1.5e-70" FT /inference="protein motif:HMMPfam:PF00809" FT misc_feature 493094..493357 FT /gene="metH" FT /locus_tag="VSAL_I0442" FT /note="HMMPfam hit to PF02607, B12 binding domain, score FT 1.2e-43" FT /inference="protein motif:HMMPfam:PF02607" FT misc_feature 493370..493741 FT /gene="metH" FT /locus_tag="VSAL_I0442" FT /note="HMMPfam hit to PF02310, B12 binding domain, score FT 5e-28" FT /inference="protein motif:HMMPfam:PF02310" FT misc_feature 494297..494710 FT /gene="metH" FT /locus_tag="VSAL_I0442" FT /note="HMMPfam hit to PF02965, Vitamin B12 dependent FT methionine synth, score 9.4e-72" FT /inference="protein motif:HMMPfam:PF02965" FT CDS complement(join(494875..495219,496227..497234)) FT /pseudo FT /transl_table=11 FT /gene="lysC" FT /locus_tag="VSAL_I0443" FT /old_locus_tag="TVS0267" FT /product="lysine-sensitive aspartokinase III (pseudogene)" FT /EC_number="2.7.2.4" FT /note="Similar to Escherichia coli Lysine-sensitive FT aspartokinase 3 LysC UniProt:P08660 (449 aa) fasta scores: FT E()=1.7e-10, 57.407% id in 54 aa. CDS is disrupted by the FT insertion of an IS element after codon 336" FT /db_xref="PSEUDO:CAQ78128.1" FT /inference="similar to sequence:UniProt:P08660" FT misc_feature complement(order(495067..495219,496227..496304)) FT /gene="lysC" FT /locus_tag="VSAL_I0443" FT /note="HMMPfam hit to PF01842, ACT domain, score 0.00011" FT /inference="protein motif:HMMPfam:PF01842" FT repeat_region complement(495222..496226) FT /note="VSa6" FT repeat_region complement(495222..495240) FT /note="IR of VSa6" FT CDS complement(495249..496130) FT /transl_table=11 FT /locus_tag="VSAL_I0444" FT /old_locus_tag="TVS0268" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ78129.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature complement(495309..495803) FT /locus_tag="VSAL_I0444" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(496208..496226) FT /note="IR of VSa6" FT misc_feature complement(496395..497174) FT /gene="lysC" FT /locus_tag="VSAL_I0443" FT /note="HMMPfam hit to PF00696, Amino acid kinase FT family,score 1.4e-27" FT /inference="protein motif:HMMPfam:PF00696" FT misc_RNA complement(497299..497473) FT /locus_tag="VSAL_I3116s" FT /product="lysine riboswitch" FT /note="Lysine riboswitch (RF00168) predicted by Rfam,score FT 62.78" FT CDS 497687..498796 FT /transl_table=11 FT /locus_tag="VSAL_I0445" FT /old_locus_tag="TVS0270" FT /product="aminotransferase class-V" FT /db_xref="GOA:B6ELR7" FT /db_xref="InterPro:IPR000192" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR020578" FT /db_xref="InterPro:IPR024169" FT /db_xref="UniProtKB/TrEMBL:B6ELR7" FT /protein_id="CAQ78130.1" FT /translation="MQSFIPPQRTLMGPGPSDVSPQVLQALSRPTIGHLDPLFIKMMDE FT VKELLKYAFQTKNEFTIAVSAPGSAGMETCFVNLVERGEKVLVCRNGVFGERMRQNVER FT CGGIAIVIDDEWGTPVSLAKVEEALIKDPEINVIAFVHAETSTGVLSDAKSISELAQKY FT NCLTIVDAVTSLGGVPLFVDEWLLDAVYSGSQKCLSCIPGLSPVTFSNKAVEKMKSRKE FT PVQSWFLDQSLVLGYWSGEGKRSYHHTAPVNSLYALHESLLMLKNEGLENAWKRHDHFH FT QELKRGLESLGVSFIVDEKYRLPQLNAVYIPDGTDDALVRKVLLEEYNLEIGAGLGDLA FT GKAWRIGLMGYAARKENVSLCLKALSDVL" FT misc_feature 497711..498769 FT /locus_tag="VSAL_I0445" FT /note="HMMPfam hit to PF00266, Aminotransferase FT class-V,score 2.8e-13" FT /inference="protein motif:HMMPfam:PF00266" FT misc_feature 498245..498307 FT /locus_tag="VSAL_I0445" FT /note="PS00595 Aminotransferases class-V FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00595" FT CDS complement(498845..500602) FT /transl_table=11 FT /locus_tag="VSAL_I0446" FT /old_locus_tag="TVS0271" FT /product="O-antigen polymerase" FT /db_xref="InterPro:IPR007016" FT /db_xref="InterPro:IPR021797" FT /db_xref="UniProtKB/TrEMBL:B6ELR8" FT /protein_id="CAQ78131.1" FT /translation="MATLLTQGTQLEARKIKKPLTKSFLVSLSILFFVCAHFFQPNPGG FT SGLHLAFNAASWIPASIAIAIAFYHIAKQGLIKYSTLTIVLFFSAVLLSVPLIYQDSSP FT LLAAGKFFGLWAGWLFFLTLQQFAFSNKQKQWLLWCIIGSVLIEAIFGYIQYLFLESGN FT SFGYNVISNRPYGIFQQPNVMASFLVTGLAIASYFLARQPIKYRENPVALTLLYITIIL FT TLPLIIVLASRTGWIAAVFSLLLLIPYMWKYCTKKRFSSWVLALIMGVSGSFVILHFSQ FT NDDFNNISLLSKKADLESPRRYTFPQALDMFLEKPITGYGNFEAAYILYTAKQHQISAD FT YKSGLPSMDHPHNEVLYWGVEGGILAIFGLLLAAGGVLLKIRKSKLDTQFALLALISPI FT FIHSQLEYPFYHSMLHWFTFIILLFWIDQLSCKYKKYRITGVSKISLRVSSLVLPIITA FT FYMLSTLHTNWILTKFETTKPMNPEILNQVSNPVVWEDRFNWDVLSAQLSIGVINKRPD FT LIIPYITWSKELIKNKPRPAFYQNLIIAYQALEQEANAEDIRREAVFLFPNNNFETVQL FT DQKLRQIRK" FT misc_feature complement(order(499193..499261,499325..499378, FT 499388..499447,499466..499534,499763..499831, FT 499850..499903,499913..499966,500003..500071, FT 500129..500197,500231..500299,500309..500368, FT 500387..500455,500483..500536)) FT /locus_tag="VSAL_I0446" FT misc_feature complement(499499..499720) FT /locus_tag="VSAL_I0446" FT /note="HMMPfam hit to PF04932, O-Antigen Polymerase, score FT 6.5e-16" FT /inference="protein motif:HMMPfam:PF04932" FT CDS complement(500682..503510) FT /transl_table=11 FT /gene="uvrA" FT /locus_tag="VSAL_I0447" FT /old_locus_tag="TVS0272" FT /product="UvrABC system protein A" FT /db_xref="GOA:B6EM51" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR004602" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EM51" FT /protein_id="CAQ78132.1" FT /translation="MDKIEVRGARTHNLKNISLTLPRDKLIVITGLSGSGKSSLAFDTL FT YAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEI FT YDYLRLLYARIGEPRCPEHHVELTAQTVSQMVDKALELPEGTKLMLLAPIIKERKGEHV FT KTLENLAAQGFIRARIDGEVCDLSDPPTLELHKKHTIEVVVDRFKVRSDLQQRLAESFE FT TALELTGGIAVIDYMDKTDNEPLIFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCD FT GLGVQQYFDADRIVLDNKLSIAEGAIKGWDQKNYYYFQMLTSLAEHYTFDLFSPFKSLS FT KKIQQIILNGSGNEEVEFHYSNDRGDLRVKRHPFEGILNTLDRRYKETESSSVRDDLSK FT YISTQSCSSCHGTRLRLEARSVFVADTTLSEICEMSIQDSMAFFSSLTLTGQKAQIADK FT IMKEINERLNFLINVGLNYLNLSRGADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSI FT GLHQRDNERLLKTLNHLRDLGNTVIVVEHDEDAIRSADHIIDIGPGAGVHGGYIVAEGD FT YAAIINNPDSLTGQYLSGAKKIPVPKERVKADPKKQVELIGATGNNLKNVTLKLPVGLF FT TCITGVSGSGKSTLINDTFFKIAHTQLNGATTSEPAPYKKIKGIEHFDKVIDIDQSPIG FT RTPRSNPATYTGIFTPIRELFSGTPESRSRGYKPGRFSFNVRGGRCEACQGDGVIKVEM FT HFLPDVYVPCDVCKSKRYNRETLEVKYKGKSIDEVLQMTIEDAHTFFAPVPVIARKLKT FT LMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQL FT LTVLHHLRERGNTIVVIEHNLDVVKTADWVVDLGPEGGNGGGEIIAEGTPEEVALVEGS FT HTARFLKPMLSL" FT misc_feature complement(500787..501614) FT /gene="uvrA" FT /locus_tag="VSAL_I0447" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 4.2e-40" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(500979..501023) FT /gene="uvrA" FT /locus_tag="VSAL_I0447" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(501570..501593) FT /gene="uvrA" FT /locus_tag="VSAL_I0447" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(501822..503441) FT /gene="uvrA" FT /locus_tag="VSAL_I0447" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 4.6e-08" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(502008..502052) FT /gene="uvrA" FT /locus_tag="VSAL_I0447" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(503397..503420) FT /gene="uvrA" FT /locus_tag="VSAL_I0447" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(503682..504551) FT /transl_table=11 FT /gene="galU" FT /locus_tag="VSAL_I0448" FT /old_locus_tag="TVS0273" FT /product="UTP-glucose-1-phosphate uridylyltransferase" FT /EC_number="2.7.7.9" FT /db_xref="GOA:B6EM52" FT /db_xref="InterPro:IPR005771" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/TrEMBL:B6EM52" FT /protein_id="CAQ78133.1" FT /translation="MIKKCLFPAAGYGTRFLPATKSMPKEMMPIVNKPLIEYGVEEAIN FT AGMDGICIVTGRGKHSLMDHFDKNYELEHQISGTNKEELLEDVRELIDAAHFTYIRQRE FT MKGLGHAILTGRELIGDEPFAVVLADDLCVNEEQGVLSQMVALYKQFRCSIVAVEEVPD FT NETHKYGVIAGEMIKDDLYRIDNMVEKPEPGTAPSNLAIIGRYILTPDIFEIIEQTEPG FT KGGEIQITDALLKQAQSGCVLAYKFKGKRFDCGSVEGYIQATNYCYENVYLKDKKSAEL FT AKQTTGKK" FT misc_feature complement(503742..504542) FT /gene="galU" FT /locus_tag="VSAL_I0448" FT /note="HMMPfam hit to PF00483, Nucleotidyl FT transferase,score 3.6e-21" FT /inference="protein motif:HMMPfam:PF00483" FT CDS complement(504688..505092) FT /transl_table=11 FT /locus_tag="VSAL_I0449" FT /old_locus_tag="TVS0274" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EM53" FT /protein_id="CAQ78134.1" FT /translation="MDKKQQRLIANFYSALDGNISNELSFEQKKSIERAVIATGLGSNN FT NIDIRKSVSFFNKRYFFVFLLGRDYRNKMRSESPLALFFMTLLTCFGVVALFGLAVVIL FT YLIKSALGIDIFHNFSFGIWDWFKEVMHIS" FT misc_feature complement(504787..504855) FT /locus_tag="VSAL_I0449" FT CDS complement(505085..506215) FT /transl_table=11 FT /locus_tag="VSAL_I0450" FT /old_locus_tag="TVS0275" FT /product="putative glycosyl transferase" FT /db_xref="GOA:B6EM54" FT /db_xref="InterPro:IPR001296" FT /db_xref="InterPro:IPR015393" FT /db_xref="UniProtKB/TrEMBL:B6EM54" FT /protein_id="CAQ78135.1" FT /translation="MTTNITVIGTRGIPDVLGGVETHCQNLYPEIKTQFDTEICVIARS FT PYVDYKKSTYRGVNTKAIWAPKKKSLEAIVHSTLSSFSTLFDRSNIVHVHAIGPGLVVP FT LLRVLGKKVVFTHHGPDYDRQKWGGFAKRMLQLGERLAVTYATEVIVISDVINDIIKSK FT YNRHDAHLVYNGVNLPTPLPQEKIDAVLTQFTLTENNYLVAVGRLVEEKGFHDLISAYE FT KANIDIPLVIMGDTDHPTPYSEQLKAQAKHVDGVIMTGFLKGEQLQSIFSKAKAFVMPS FT YHEGLPIALLEAMSYSLPAIVSNIPANLEVKLSPESYFPVGDIDSLTTALINHSIGSES FT NVNYSQYLAHYDWHKIAGKTMAIYDTIEKKRTQHDG" FT misc_feature complement(505163..505657) FT /locus_tag="VSAL_I0450" FT /note="HMMPfam hit to PF00534, Glycosyl transferases group, FT score 1.1e-25" FT /inference="protein motif:HMMPfam:PF00534" FT CDS complement(506219..507424) FT /transl_table=11 FT /locus_tag="VSAL_I0451" FT /old_locus_tag="TVS0276" FT /product="putative glycosyl transferase" FT /db_xref="GOA:B6EM55" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:B6EM55" FT /protein_id="CAQ78136.1" FT /translation="MKVRLVNKFFFMKGGAETVYFQERDMLLSEGIDIIEFSMNHEKNL FT ESNYSYFFVNNVDYYQEQTLKNKITTAVNFIHNSEACIKFKQLLEQEKPDLVHFHNIYH FT QLTPSIIKVAKQFGCKTVLTAHDTKIACPSYTMYRDGHTCEDCVHGSVFNATIHRCQES FT SLIKSFLLSAEAIYQKVSGNYQQLDAIVSPSRFLGRFIQQKLPHNRVDIIVNGIDEHVS FT NEGISDQGYFLYLGRLSTEKGVPTLAKAHQLMKENTALKIVGDGPVFNELKETYPRAEL FT LGFKSGDELLTLIKQAKAVIVPSECYENCSMSVLEAMSYSKPVIASRIGGLPEQIRDGV FT DGYLFEAGNAQALADKLDVLAASLSASAEMGKNARQRFLSKYTLTKHKTDLLNLYNELL FT KG" FT misc_feature complement(506294..506776) FT /locus_tag="VSAL_I0451" FT /note="HMMPfam hit to PF00534, Glycosyl transferases group, FT score 8e-33" FT /inference="protein motif:HMMPfam:PF00534" FT CDS complement(507421..508419) FT /transl_table=11 FT /locus_tag="VSAL_I0452" FT /old_locus_tag="TVS0277" FT /product="putative glycosyl transferase" FT /db_xref="GOA:B6EM56" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:B6EM56" FT /protein_id="CAQ78137.1" FT /translation="MTSSPFISVIIKTYNEESGIANTITSIQEHMSKYPHKIIVADSLS FT TDKTQKIATQMGVTVVSLTNEEDRCCGVGHQLGYLHSEGDFLLLLDGDMKLESGFIDHG FT ISFLLEHPEYAAVAGAVEMDDVDSYEFKSRKQRIHQIYPIGDCSHLGGGGLYRKSVIDE FT IGYLTNRNLHAYEESELGMRLGLAGYKLHRLDVPYFSHTSYTMSSFELIKHRWKGGYLF FT ASGELLKGSFGTPLFKKALSTVQNEAIFTLYLLLLISTLFTFNSLIIMLTALPLFAFIT FT LKTIKNRSIKDALHSVINLSVFSAGLLRGLFLPLKSPTQPPQHKIINEGKK" FT misc_feature complement(order(507475..507543,507580..507648)) FT /locus_tag="VSAL_I0452" FT misc_feature complement(507925..508398) FT /locus_tag="VSAL_I0452" FT /note="HMMPfam hit to PF00535, Glycosyl transferase family, FT score 8e-17" FT /inference="protein motif:HMMPfam:PF00535" FT CDS complement(508412..509794) FT /transl_table=11 FT /locus_tag="VSAL_I0453" FT /old_locus_tag="TVS0278" FT /product="membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EM57" FT /protein_id="CAQ78138.1" FT /translation="MMPLNTGFFLQIYAVISLVLCGLTQYFTGISAILWLPFLLAFTMT FT GLLFLQNRYTPLDLDHKEIIILVLFIGFFVQAVLSTFLQNGITTTIVGLKNELALSLIL FT FCLLLRFCRESQIYRVTKTLYWIFYAQFPVILFQIFVILPKRVAAHGEYEKWDSVVGTF FT GGDPMGGGNTAAMGLFCLLIMLLKLSEYKHGLCSIKSTILHIGAAFTLCILGEVKFVIL FT LSPILLAYVWLAPSYIKGMKSYDIKIILAIIGGMLLLMSIAILLLSLSYSSAFGSDPSK FT GPLDIFIGSLEYIFDPNYIMPTGELGRMTTIFFWLDNNDFYGLPNALFGYGLNTTNHGS FT SVSPGFLNVLFNVILDTTALSVLLWELGIIGTLFFISMTLYILRVCKPTPLFNRDDVTQ FT EDIRLMSYPPAFNAFAIACLLSLPYSQILMLVPMLQFIFYLSLGSNLVIRKSLITAAAN FT HD" FT misc_feature complement(order(508451..508519,508646..508714, FT 508985..509053,509096..509191,509228..509296, FT 509366..509425,509459..509527,509555..509608, FT 509645..509698,509708..509776)) FT /locus_tag="VSAL_I0453" FT CDS complement(509794..510999) FT /transl_table=11 FT /locus_tag="VSAL_I0454" FT /old_locus_tag="TVS0279" FT /product="membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EM58" FT /protein_id="CAQ78139.1" FT /translation="MSLLKSVSTIAGASVISQIIGAVSIWLISHKYDMAQVGVYALVYS FT VVLIGAQICTFASQLLLPKQSDSQVTQNIIFSLLQSVIIALPYTVIIIQFFDLNGYLLY FT LLTLCHAWVLISENLLLRIENIRLLAFQRISISLLVIGAVALTQTTELFYVCWAIGLFI FT LVSIWICHSVSFSKIRFSHFSLSNNVQFMKENRAHLSGIGSAEVLAMANNNLPTLLINF FT WFSPLIAGYFAVVNRFCLAPVTIVGNAVRNSIFAKWSIDFRNNKFNYQEFKKVRLMLLI FT LGLIATAGVLLFYPLIMQLGFNDEWLSSVPTSRYMLPYLLPALAVCPLTVIELVFGSPK FT YFLRIQIEQLLVITIAFIIFPYFYHNYAYSVLLFSILSFVRYSFIYLKVNKRAHLLAQE FT NK" FT misc_feature complement(order(509845..509898,509908..509976, FT 509989..510057,510100..510168,510277..510345, FT 510475..510543,510562..510615,510712..510780, FT 510817..510885,510913..510981)) FT /locus_tag="VSAL_I0454" FT sig_peptide complement(510934..510999) FT /locus_tag="VSAL_I0454" FT CDS complement(join(511007..512431,513552..514313)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0455" FT /old_locus_tag="TVS0280" FT /product="putative chain length determinant protein FT (pseudogene)" FT /EC_number="2.7.10.2" FT /note="Similar to Escherichia coli Tyrosine-protein kinase FT etk UniProt:P38134 (726 aa) fasta scores: FT E()=8.8e-08,19.214% id in 458 aa. CDS is disrupted by the FT insertion of an IS element after codon 255" FT /db_xref="PSEUDO:CAQ78140.1" FT /inference="similar to sequence:UniProt:P38134" FT misc_feature complement(511862..511921) FT /locus_tag="VSAL_I0455" FT repeat_region complement(512434..513555) FT /note="VSa8" FT repeat_region complement(512434..512462) FT /note="IR of VSa8" FT CDS complement(512441..513007) FT /transl_table=11 FT /locus_tag="VSAL_I0456" FT /old_locus_tag="TVS0281" FT /product="transposase" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:B6EGL7" FT /protein_id="CAQ78141.1" FT /translation="MKFNNFSNILNSLIEMERTNKCELFYFDESGFSQKSNLPYCWGPI FT GVQSLRPAHSHSKRLNVLGFLSRQGKLSFQTTEGRVTTDTVIDAFEHFINARKNDKPCF FT IILDNASFHRSAKFKQKLHEWLMNDVLVCYLPPYSPELNIIEILWKKVKYEWLPCEAFK FT TFEDLSINIKNILNYYGEKFTITFA" FT CDS complement(513025..513447) FT /transl_table=11 FT /locus_tag="VSAL_I0457" FT /old_locus_tag="TVS0282" FT /product="transposase" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:B6EGL6" FT /protein_id="CAQ78142.1" FT /translation="MKAVNPLTDNEKITLKEAIANHPKNRVRIRAHAIILSDKGYSILA FT LTDILDAKFETISSWIDHWEACGMLGLYDAVRIGRKPIYTEAEVYRLKSLVDEEPHQLK FT RAQAILEEETGKKSSLDTIKRNIKKVITVTKEPDTH" FT repeat_region complement(513527..513555) FT /note="IR of VSa8" FT misc_feature complement(513795..514274) FT /locus_tag="VSAL_I0455" FT /note="HMMPfam hit to PF02706, Chain length determinant FT protein, score 2.2e-17" FT /inference="protein motif:HMMPfam:PF02706" FT misc_feature complement(514158..514226) FT /locus_tag="VSAL_I0455" FT CDS complement(514317..514898) FT /transl_table=11 FT /locus_tag="VSAL_I0458" FT /old_locus_tag="TVS0284" FT /product="polysaccharide biosynthesis/export protein" FT /db_xref="GOA:B6EM62" FT /db_xref="InterPro:IPR003715" FT /db_xref="InterPro:IPR019554" FT /db_xref="UniProtKB/TrEMBL:B6EM62" FT /protein_id="CAQ78143.1" FT /translation="MKSFFISFCLFISVLSHAYASETSPVKNTEIQKSDTTIQKDDLGY FT VLGAGDSIQISVFKEPDMTLRLKIHRGGFVNFPYLGDVQLLGRTPAQIEKDIETKLADG FT YIVQPMVTVSIESFRKFFISGEVANPNGYEFQPGLTVEQAIAMAGGFTDRSDRDGINVR FT LAATNELIEDVGPTYPVGPGDVVIIEQSFF" FT misc_feature complement(514443..514799) FT /locus_tag="VSAL_I0458" FT /note="HMMPfam hit to PF02563, Polysaccharide FT biosynthesis/export protei, score 1.6e-33" FT /inference="protein motif:HMMPfam:PF02563" FT sig_peptide complement(514839..514898) FT /locus_tag="VSAL_I0458" FT CDS complement(514899..516215) FT /transl_table=11 FT /locus_tag="VSAL_I0459" FT /old_locus_tag="TVS0285" FT /product="putative exported protein" FT /note="Weakly similar to Vibrio parahaemolyticus CPS FT biosynthesis protein CpsB UniProt:Q847V4 (402 aa) fasta FT scores: E()=2e-14, 24.936% id in 393 aa" FT /db_xref="InterPro:IPR018759" FT /db_xref="UniProtKB/TrEMBL:B6EM63" FT /inference="similar to sequence:UniProt:Q847V4" FT /protein_id="CAQ78144.1" FT /translation="MSVIPPIKLACTQRVLLLMFYMMSSFCYAALTPKPHIGPAGIEFQ FT SNVDLDYGYDDNVNFQSEKAPHVTSDFFNLKPFLKLEGKRNADTYTVEYLGDYRQYQND FT ATSDDYDDHTIRFIGSWEKGLNNDLLFTIENVLAHENRGEGLTDGLSAEQFKQYGIDDV FT LKTNMLNTELRYSIDKQDSIGKLSFAAQYKEFSYDGRESNDVHKNNFNQYIKDQNWNQT FT TFTIELFDQASSRTRFRYSIISNLRDYEEDNKKNTNETFLVAGIKSQQTGKTTIDANIA FT WLYKTFPNQPDSQGFSGLNWDVDIAWSPVRYSTFHLFTDQRVEDPTEVGGYVLNTKYGT FT RWEHFWWSNRFSSELGFNYETSADQHKNDGKTTTTTDAMAKLTYKFRPSIILELSYQQM FT INTSDKEFDDFTINNSAETIIQTLGYDKSIIMFTTKVQI" FT sig_peptide complement(516129..516215) FT /locus_tag="VSAL_I0459" FT CDS complement(join(516193..517509,517517..517627)) FT /pseudo FT /transl_table=11 FT /gene="wcaJ" FT /locus_tag="VSAL_I0460" FT /old_locus_tag="TVS0286" FT /product="colanic biosynthesis UDP-glucose lipid carrier FT transferase (pseudogene)" FT /note="Similar to Escherichia coli Putative colanic FT biosynthesis UDP-glucose lipid carrier transferase FT UniProt:P71241 (464 aa), E()=3.5e-63 id 48.387%; ungapped FT id 51.429%; 372 aa overlap. Contains a framshift after FT codon 37. The sequence has been checked and is believed to FT be correct." FT /db_xref="PSEUDO:CAQ78145.1" FT /inference="similar to sequence:UniProt:P71241" FT misc_feature complement(516196..516768) FT /gene="wcaJ" FT /locus_tag="VSAL_I0460" FT /note="HMMPfam hit to PF02397, Bacterial sugar transferase, FT score 1.1e-37" FT /inference="protein motif:HMMPfam:PF02397" FT misc_feature complement(order(516688..516753,517195..517263)) FT /gene="wcaJ" FT /locus_tag="VSAL_I0460" FT CDS 517928..518479 FT /transl_table=11 FT /gene="ssb" FT /locus_tag="VSAL_I0461" FT /old_locus_tag="TVS0288" FT /product="single-stranded DNA-binding protein" FT /db_xref="GOA:B6EM65" FT /db_xref="InterPro:IPR000424" FT /db_xref="InterPro:IPR011344" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:B6EM65" FT /protein_id="CAQ78146.1" FT /translation="MASRGINKVILVGNLGQDPEIRYMPSGGAVANITIATSESWRDKA FT TGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYVEGQLQTRKWQDQSGQDRFTTEVVV FT QGFNGVMQMLGGRGQGQGAPAGGQQQQQQGNWGQPQQPAQQNNFAPQQQQQQAPQQQAP FT QAAQPQYNEPPMDFDDDIPF" FT misc_feature 517943..518269 FT /gene="ssb" FT /locus_tag="VSAL_I0461" FT /note="HMMPfam hit to PF00436, Single-strand binding FT protein family, score 3.6e-37" FT /inference="protein motif:HMMPfam:PF00436" FT misc_feature 517943..517981 FT /gene="ssb" FT /locus_tag="VSAL_I0461" FT /note="PS00735 Single-strand binding protein family FT signature 1." FT /inference="protein motif:ProSite:PS00735" FT misc_feature 518084..518113 FT /gene="ssb" FT /locus_tag="VSAL_I0461" FT /note="PS00736 Single-strand binding protein family FT signature 2." FT /inference="protein motif:ProSite:PS00736" FT CDS complement(518552..519181) FT /transl_table=11 FT /locus_tag="VSAL_I0462" FT /old_locus_tag="TVS0289" FT /product="membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EM66" FT /protein_id="CAQ78147.1" FT /translation="MVIANCFAVISKQYLNYSHMETIIRLFDLDREMNVPTLYSSCAMI FT VASILLGLIAYIHKQKKERHLAWAGLSGIFLFLALDEMTELHEMLVGPVRNSLHTTGAL FT YFAWVIPYAVLLVIFALTYFKFLFRLPKTTRNLLVISGIVYVSGALMMELIGGAISQQY FT GTDSLIYSISYSIEETLEMLGIAFLIYTTTTYISAQFPNLTMTIKK" FT misc_feature complement(order(518579..518647,518705..518773, FT 518810..518878,518921..518989,519008..519076)) FT /locus_tag="VSAL_I0462" FT repeat_region complement(519226..520339) FT /note="VSa8" FT repeat_region complement(519226..519254) FT /note="IR of VSa8" FT CDS complement(519233..519799) FT /transl_table=11 FT /locus_tag="VSAL_I0463" FT /old_locus_tag="TVS0290" FT /product="transposase" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:B6EGL7" FT /protein_id="CAQ78148.1" FT /translation="MKFNNFSNILNSLIEMERTNKCELFYFDESGFSQKSNLPYCWGPI FT GVQSLRPAHSHSKRLNVLGFLSRQGKLSFQTTEGRVTTDTVIDAFEHFINARKNDKPCF FT IILDNASFHRSAKFKQKLHEWLMNDVLVCYLPPYSPELNIIEILWKKVKYEWLPCEAFK FT TFEDLSINIKNILNYYGEKFTITFA" FT CDS complement(519817..520239) FT /transl_table=11 FT /locus_tag="VSAL_I0464" FT /old_locus_tag="TVS0291" FT /product="transposase" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:B6EGL6" FT /protein_id="CAQ78149.1" FT /translation="MKAVNPLTDNEKITLKEAIANHPKNRVRIRAHAIILSDKGYSILA FT LTDILDAKFETISSWIDHWEACGMLGLYDAVRIGRKPIYTEAEVYRLKSLVDEEPHQLK FT RAQAILEEETGKKSSLDTIKRNIKKVITVTKEPDTH" FT repeat_region complement(520311..520339) FT /note="IR of VSa8" FT CDS 520546..522531 FT /transl_table=11 FT /locus_tag="VSAL_I0465" FT /old_locus_tag="TVS0292" FT /product="putative membrane associated signaling protein" FT /db_xref="GOA:B6EM69" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001054" FT /db_xref="InterPro:IPR001633" FT /db_xref="UniProtKB/TrEMBL:B6EM69" FT /protein_id="CAQ78150.1" FT /translation="MRKTPNLRLSNRLISFVTLMVSAAIFVLFVGGAISFKQIGTEYLD FT HYLVGVVNVVDEELLEPEEATSMAKWLPKLLKASSVMSMELSSESGPIYAFQSLAILPD FT DNLLYQKTYPLDLNKGYSITFKSLPPYSAFTYSLGALFSITAAIAIIVVSLLWGVVWLR FT KQLYGSELLEERGRMLLAGKVDSYEVGSEEEWPATASLALDNVIAELKDARKERSRFDT FT FIRTHTFLDQLTGSANRVLFDSKLESTLQESESQGVLLLLRINGWEDLIEEQGKRAGDE FT LIVELGKQLNNLIQRYSDSVLSRYYTSEFALLIPQQSLKEAKLLSSQCLKMVEKIIPPT FT SLDADNWCHIGVSMYVSGEQRGRLMNELDMAHRSALLQNNNSWSLFKKQQQLIESLGSV FT RWRTLFDAIFEQEQLVLYKQTTFLFEGNNIIPLHLELFSRIKDENGIQIKASRFLPAIE FT QVGYQIKLDSAVLKQAFPLLNDTEMSQHSFSVHLHIKSLQNSAFIRQLRDRLLQTPREE FT LQRLSFELAEGQVVTHLDSVRPIAKMLKSFGCKLVVEQAGRTIVSTHYIKDLHVDYVKL FT HRSLIKDIHQRYENQLFVRSLLGACETTGAQVIAVGIEKDKELKRLKELGVKGGQGRIF FT EVETSLFHQQKKIAIPKRRNRWEKRY" FT sig_peptide 520546..520656 FT /locus_tag="VSAL_I0465" FT misc_feature order(520582..520650,520957..521025) FT /locus_tag="VSAL_I0465" FT misc_feature 521215..521691 FT /locus_tag="VSAL_I0465" FT /note="HMMPfam hit to PF00990, GGDEF domain, score 2.8e-10" FT /inference="protein motif:HMMPfam:PF00990" FT misc_feature 521734..522459 FT /locus_tag="VSAL_I0465" FT /note="HMMPfam hit to PF00563, EAL domain, score 1.2e-41" FT /inference="protein motif:HMMPfam:PF00563" FT CDS 522657..524120 FT /transl_table=11 FT /gene="mshI" FT /locus_tag="VSAL_I0466" FT /old_locus_tag="TVS0293" FT /product="type IV pilus, mannose-sensitive hemagglutinin D FT (MSHI)" FT /db_xref="InterPro:IPR016871" FT /db_xref="UniProtKB/TrEMBL:B6EM70" FT /protein_id="CAQ78151.1" FT /translation="MNMMDAFKKLTLSRSIKTTTSIVLLQGGIYIAKSDDDNQLKESHY FT TEINHPQAWKEALVSACQQAGVSDCGANIIVGSHLYQSFQIEKPNIPKEELIGALPFLV FT KDLITDRVSDIVADGIETSNGKLQVYISQIATIKSIVDLLQPFSIQVINITPDELTWAN FT AKPEQDGFMLLCHSKSADFKLLAFNEGRLHLNRSLRGIKAPLTGDESSHFQLDNLALEL FT QRSLDYLSAHSQGVNINHLYFRCDDEDDSTLSTELQNRLGVKVASLLVDEPRVFRAGEV FT LSWLGLFNKPNINLYNDTLKPKTDYLTLPNALISWGVGMVLVGIIAGYYQWQLYGVENK FT VALASSQESIYNQELIEVNKKLAGHKPSAAKLAAIKRLKDDINAKKASLKMIDNFDEGM FT QVGYSGLMSSLTQIGKGNISLTKIYISGNDVNFTGFARTPDVVPSWIQSFESELHLVGR FT TFAQLNIKTDEKGVVSFTLNTTVSKESNE" FT CDS 524113..524751 FT /transl_table=11 FT /gene="mshJ" FT /locus_tag="VSAL_I0467" FT /old_locus_tag="TVS0294" FT /product="type IV pilus, mannose-sensitive hemagglutinin D FT (MSHJ)" FT /db_xref="GOA:B6EM71" FT /db_xref="InterPro:IPR007690" FT /db_xref="InterPro:IPR014717" FT /db_xref="UniProtKB/TrEMBL:B6EM71" FT /protein_id="CAQ78152.1" FT /translation="MNNWIKAKDAFLALSQREKMLIVIVGWVAVIFISLTLVIEPQMAK FT TQKAEQQLSRVTNSISSLKQQIELAQFRLQKDPNLEINKEYKELTLQSQDLANILSKRV FT AALVSPSQMAQLLETVLQKSSKLRLSSMSTLPSERLLDENSNAGYYIHPIKLVLSGSYF FT DFEEYLSNLESLPVKYYWRNFQYKVKTYPNAELSIEVYTLGSSKGFIGG" FT misc_feature 524170..524229 FT /gene="mshJ" FT /locus_tag="VSAL_I0467" FT CDS 524753..525094 FT /transl_table=11 FT /gene="mshK" FT /locus_tag="VSAL_I0468" FT /old_locus_tag="TVS0295" FT /product="type IV pilus, mannose-sensitive hemagglutinin D FT (MSHK)" FT /db_xref="UniProtKB/TrEMBL:B6EM72" FT /protein_id="CAQ78153.1" FT /translation="MKYFLLLFVLLASSINASEISAGHDPTEPLSWLKPEPQQKKIVKK FT SQYFPSLQAINCNGSGNADCYAVLDDKSMKQGEKISGYTLLSINDDNVFIGRAGKRWEL FT SLFSQDIKH" FT sig_peptide 524753..524803 FT /gene="mshK" FT /locus_tag="VSAL_I0468" FT CDS 525107..526747 FT /transl_table=11 FT /gene="mshD" FT /locus_tag="VSAL_I0469" FT /old_locus_tag="TVS0296" FT /product="type IV pilus, mannose-sensitive hemagglutinin D FT (MSHD)" FT /db_xref="GOA:B6EM73" FT /db_xref="InterPro:IPR001775" FT /db_xref="InterPro:IPR004845" FT /db_xref="InterPro:IPR004846" FT /db_xref="InterPro:IPR011514" FT /db_xref="InterPro:IPR011662" FT /db_xref="InterPro:IPR013358" FT /db_xref="UniProtKB/TrEMBL:B6EM73" FT /protein_id="CAQ78154.1" FT /translation="MKACKIIVGLMVASLAGCSMGHRDPTEIKQTLDQSINDNGGQLLD FT DLPASIQADLMPDLNSSTVSIDEPVKRFRIKANGVSAKAFFTSLVKGTEYSVILHPDVS FT GRITMNVNEVTLDEVLRSVEDLYGYEIIKSGKVLQVYPATIRTETIPVDYLQLTRKGRS FT LTTITTGSITNSDSNSSNSNDSSNSNNSSSSSSSSSATGGTEIETTSESDFWKELEKAV FT SVMIGNGSGRSVVVSPQASVITITASPDELRKVKQFLGISHKRLQRQVILEAKLLEVTL FT SDGYQQGINWSNLTAAVGGTDIVFGQVPGTTAGVLPGMDAIGSLLGGQTNITVSDGNFS FT AVLSFMDTQGDLNVLSSPRVTAANNQKAVIKVGRDEYFVTEVSSVTGNGDNSNASPEVT FT LTPFFSGISLDVTPQIDDKGNVMLHVHPSVIDVETETKIIDLGDVGGVLELPLAKSSIR FT ESDSVIRAKSGDVVVIGGLMKSQTVDQVSKVPFLGDIPVLGHLFRNVSQLTTKTELVIL FT LKPTVVGVDTWQEELERSRDLLQEWFPDE" FT sig_peptide 525107..525175 FT /gene="mshD" FT /locus_tag="VSAL_I0469" FT misc_feature 525128..525160 FT /gene="mshD" FT /locus_tag="VSAL_I0469" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 525389..525535 FT /gene="mshD" FT /locus_tag="VSAL_I0469" FT /note="HMMPfam hit to PF07660, Secretin and TonB N terminus FT short domai, score 2.6e-08" FT /inference="protein motif:HMMPfam:PF07660" FT misc_feature 525545..525826 FT /gene="mshD" FT /locus_tag="VSAL_I0469" FT /note="HMMPfam hit to PF07655, Secretin N-terminal FT domain,score 6.2e-26" FT /inference="protein motif:HMMPfam:PF07655" FT misc_feature 525917..526678 FT /gene="mshD" FT /locus_tag="VSAL_I0469" FT /note="HMMPfam hit to PF00263, Bacterial type II and III FT secretion syst, score 6.2e-67" FT /inference="protein motif:HMMPfam:PF00263" FT misc_feature 526511..526612 FT /gene="mshD" FT /locus_tag="VSAL_I0469" FT /note="PS00875 Bacterial type II secretion system protein D FT signature." FT /inference="protein motif:ProSite:PS00875" FT CDS 526758..527606 FT /transl_table=11 FT /gene="mshM" FT /locus_tag="VSAL_I0470" FT /old_locus_tag="TVS0297" FT /product="type IV pilus, mannose-sensitive hemagglutinin D FT (MSHM)" FT /db_xref="InterPro:IPR018647" FT /db_xref="UniProtKB/TrEMBL:B6EM74" FT /protein_id="CAQ78155.1" FT /translation="MYESHFGLKQLPFTLTPNTSLFHGLLPHYEAIQTVLSAISMGEGV FT IKVTGEIGTGKTLVCRMLMNQLPSNVELLYLPNPVMNGHELRQALAKELRIEQHGDDIA FT LTDRIHEKIIELQALGKTAVVFLDEAQALSDEALETLRLFGNLETDYKKLLQIVLFGQP FT ELDERLQQYHLRQLRQRITFSATLRPLTMSETVAYIRFRMTESGCEVNPFSLTQMKAIW FT RATTGVPRLINQVCHKSLLISFSEQLIIVSSRSVFSAIKDTTDTMKPTYYFPKFWGWRK FT A" FT misc_feature 526905..526928 FT /gene="mshM" FT /locus_tag="VSAL_I0470" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 527603..528676 FT /transl_table=11 FT /gene="mshN" FT /locus_tag="VSAL_I0471" FT /old_locus_tag="TVS0298" FT /product="type IV pilus, mannose-sensitive hemagglutinin D FT (MSHN)" FT /db_xref="GOA:B6EM75" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="UniProtKB/TrEMBL:B6EM75" FT /protein_id="CAQ78156.1" FT /translation="MSVTNKALLNITKAKSDVENTSTISPAIVPNMESRFKAPFFFAIG FT LLSSISVLGWATLNNEPTPVTTPIANDAAVVELASNSPTKNSTPESVSSIYLSESRDKT FT EKQAAKITTPVPTAIIKTASTAEKPTVKNENTVPVISTKQNVKSESDAFYVEEVELLPS FT ELAEKSRSAARKALDESDFKQAILEYYTVLKYQPRDDDSRKKLAALLYGKHQVKEAAVV FT LQQGIKLDNDSVTLRLALASLLQREEQPEAALSVVEYIPLEASIDYLATRGGLAQQLKF FT IDLAKESYQMLVNKDPDNGRWWLGLAIVYEREAEIDKAYDTYQSALIKPGLSRSSQVFV FT RDRIKLLETMKEVNNAS" FT CDS join(528666..529007,529011..530399) FT /pseudo FT /transl_table=11 FT /gene="mshE" FT /locus_tag="VSAL_I0472" FT /old_locus_tag="TVS0299" FT /product="type IV pilus, mannose-sensitive hemagglutinin E FT (MSHE) (pseudogene)" FT /note="Similar to Vibrio cholerae Mannose-sensitive FT hemagglutinin E MshE (fragment) UniProt:Q56676 (535 aa) FT fasta scores: E()=5.8e-27, 73.874% id in 111 aa. Contains a FT nonsense mutation (GAA to TAA) after codon 114. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ78157.1" FT /inference="similar to sequence:UniProt:Q56676" FT misc_feature order(528789..529007,529011..529124) FT /gene="mshE" FT /locus_tag="VSAL_I0472" FT /note="HMMPfam hit to PF05157, GSPII_E N-terminal FT domain,score 1.9e-23" FT /inference="protein motif:HMMPfam:PF05157" FT misc_feature 529200..530036 FT /gene="mshE" FT /locus_tag="VSAL_I0472" FT /note="HMMPfam hit to PF00437, Type II/IV secretion system FT protein, score 3.7e-109" FT /inference="protein motif:HMMPfam:PF00437" FT misc_feature 529638..529661 FT /gene="mshE" FT /locus_tag="VSAL_I0472" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 529815..529859 FT /gene="mshE" FT /locus_tag="VSAL_I0472" FT /note="PS00662 Bacterial type II secretion system protein E FT signature." FT /inference="protein motif:ProSite:PS00662" FT CDS 530410..531636 FT /transl_table=11 FT /gene="mshG" FT /locus_tag="VSAL_I0473" FT /old_locus_tag="TVS0301" FT /product="type IV pilus, mannose-sensitive hemagglutinin FT protein" FT /db_xref="GOA:B6EM77" FT /db_xref="InterPro:IPR003004" FT /db_xref="InterPro:IPR018076" FT /db_xref="UniProtKB/TrEMBL:B6EM77" FT /protein_id="CAQ78158.1" FT /translation="MAMFKYSGRNARGIQVSGRVESVSQEGAAEQLMNEGIIPTSIVAS FT KFGSSSSTLDWKKWFQPNIPLDVLVIFCRQMYSLTKAGVPLLRAMNGLSQNSSNKILKK FT ALDEVTSDLTNGRSLSVSMQQHPHVFSSLFVSMIHVGENTGRLDQALMQLASYYEQEME FT TRKRIKSAMRYPIFVLSFILLAMFVLNVKVIPQFTSMFARFGVELPLPTRILMATSSFF FT VNYWHVLIAAMAGAFCAFQAWISRDDGREKWDKFRLKVPIVGDIVTRAQMSRFSRTFAL FT MLKSGVPLNQSLALSAEALGNKYLENRLLEMKNGIESGTSMSATAAQSGIFTPLVQQMI FT AVGEETGQIDDLLLEVSDFYDREVDYDLRTLTARIEPLLLVVVAGMVLILALGIFLPMW FT NMLDVVKGS" FT misc_feature 530623..530994 FT /gene="mshG" FT /locus_tag="VSAL_I0473" FT /note="HMMPfam hit to PF00482, Bacterial type II secretion FT system protein F, score 5.1e-25" FT /inference="protein motif:HMMPfam:PF00482" FT misc_feature order(530935..531003,531076..531144,531538..531606) FT /gene="mshG" FT /locus_tag="VSAL_I0473" FT misc_feature 531232..531600 FT /gene="mshG" FT /locus_tag="VSAL_I0473" FT /note="HMMPfam hit to PF00482, Bacterial type II secretion FT system protein F, score 2.8e-20" FT /inference="protein motif:HMMPfam:PF00482" FT CDS 531636..532088 FT /transl_table=11 FT /gene="mshF" FT /locus_tag="VSAL_I0474" FT /old_locus_tag="TVS0302" FT /product="type IV pilus, mannose-sensitive hemagglutinin FT protein MshF" FT /db_xref="UniProtKB/TrEMBL:B6EM78" FT /protein_id="CAQ78159.1" FT /translation="MVSSSRIMWGTIFVILLATIMWQWNKMEPEVENAALIMTSRDILS FT SANEYRNYWVVSGEPASIQKEGINVQFSALGWPIVFNDGKLDCRAWLTLLLPEKKTIYT FT DSITITHEIKESNYNRCNYGIADGKMISVMLINDIFKVNVIFSETK" FT misc_feature 531639..531707 FT /gene="mshF" FT /locus_tag="VSAL_I0474" FT CDS 532170..532739 FT /transl_table=11 FT /gene="mshB" FT /locus_tag="VSAL_I0475" FT /old_locus_tag="TVS0303" FT /product="type IV pilus, prepilin-like protein (MSHB)" FT /db_xref="InterPro:IPR001120" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:B6EM79" FT /protein_id="CAQ78160.1" FT /translation="MIMKRQKGFSLVELVIVIVVIGLLATVALPRFLDVSLEAKKASVE FT GVAGGYATAVLSARAQWEAEARPKIDGYNAVSYDGTEFWLTDPSQANQSDFRPGYPMAP FT REDLDGATTGGYPSELTSKECILLMEMLLQNAPYVTDDAKDEKAKYLAEIITDNSRKQC FT KYTQQENEGHFFTYEPESGRVVVTLQ" FT misc_feature 532188..532259 FT /gene="mshB" FT /locus_tag="VSAL_I0475" FT /note="HMMPfam hit to PF07963, Prokaryotic N-terminal FT methylation motif, score 2e-07" FT /inference="protein motif:HMMPfam:PF07963" FT misc_feature 532188..532256 FT /gene="mshB" FT /locus_tag="VSAL_I0475" FT misc_feature 532188..532250 FT /gene="mshB" FT /locus_tag="VSAL_I0475" FT /note="PS00409 Prokaryotic N-terminal methylation site." FT /inference="protein motif:ProSite:PS00409" FT CDS 532892..533365 FT /transl_table=11 FT /gene="mshA" FT /locus_tag="VSAL_I0476" FT /old_locus_tag="TVS0304" FT /product="type IV pilus, mannose-sensitive hemagglutinin A" FT /note="Expression may be regulated by Fur" FT /db_xref="InterPro:IPR001120" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:B6EM80" FT /protein_id="CAQ78161.1" FT /translation="MKRQGGFTLIELVVVIVILGILAVTAAPKFLNLQGDARKSSLQGL FT KGAMAGASGIVYGKAAIEGVERGDASGDSKLADGTTLKYGYPTADNNGIESVVVGLAED FT WSRASVSGASSLLVGFKVSGATETTIKATKCFVTYNEATASSAVTTLVTDDGC" FT sig_peptide 532892..532969 FT /gene="mshA" FT /locus_tag="VSAL_I0476" FT misc_feature 532904..532975 FT /gene="mshA" FT /locus_tag="VSAL_I0476" FT /note="HMMPfam hit to PF07963, Prokaryotic N-terminal FT methylation motif, score 5.9e-08" FT /inference="protein motif:HMMPfam:PF07963" FT misc_feature 532904..532972 FT /gene="mshA" FT /locus_tag="VSAL_I0476" FT misc_feature 532904..532966 FT /gene="mshA" FT /locus_tag="VSAL_I0476" FT /note="PS00409 Prokaryotic N-terminal methylation site." FT /inference="protein motif:ProSite:PS00409" FT CDS 533617..534087 FT /transl_table=11 FT /gene="mshA" FT /locus_tag="VSAL_I0477" FT /old_locus_tag="TVS0305" FT /product="type IV pilus, mannose-sensitive hemagglutinin A" FT /note="Putative duplicate of TVS0304" FT /db_xref="InterPro:IPR001120" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:B6EM81" FT /protein_id="CAQ78162.1" FT /translation="MKRQGGFTLIELVVVIVILGILAVTAAPKFLNLQGDARKSSLQGL FT KGAMSGASGIVYGKSAINGVEGAISGSVDSIDVAFGYPTATSAGIATAVVGLSDDWTSF FT PDATTTPKSYVSTFKKDTLSDVSEIRATECFVEYKEGVSGAAPIITVDDDKC" FT sig_peptide 533617..533694 FT /gene="mshA" FT /locus_tag="VSAL_I0477" FT misc_feature 533629..533700 FT /gene="mshA" FT /locus_tag="VSAL_I0477" FT /note="HMMPfam hit to PF07963, Prokaryotic N-terminal FT methylation motif, score 5.9e-08" FT /inference="protein motif:HMMPfam:PF07963" FT misc_feature 533629..533697 FT /gene="mshA" FT /locus_tag="VSAL_I0477" FT misc_feature 533629..533691 FT /gene="mshA" FT /locus_tag="VSAL_I0477" FT /note="PS00409 Prokaryotic N-terminal methylation site." FT /inference="protein motif:ProSite:PS00409" FT CDS 534214..534828 FT /transl_table=11 FT /gene="mshC" FT /locus_tag="VSAL_I0478" FT /old_locus_tag="TVS0306" FT /product="type IV pilus, prepilin-like protein (MSHC)" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:B6EM82" FT /protein_id="CAQ78163.1" FT /translation="MKVPRIKLQQIKRIKINGFTLIELIVVIVLLAIIAAYASSKYMGV FT SRFSSAAAQEQVMSILRQIQVASMQTNIPINETSKDGVDECRILHLASDKFGVSQACQN FT QNMNSAVLSDYSKETNQQQLELMKLSYEFTNSDGAISISQLSFDLLGRPIIPLSSATSS FT LCSGEDCRITITTSSSNESRSVCINGEGFIYRSILDEGCGL" FT sig_peptide 534214..534372 FT /gene="mshC" FT /locus_tag="VSAL_I0478" FT misc_feature 534259..534327 FT /gene="mshC" FT /locus_tag="VSAL_I0478" FT misc_feature 534262..534333 FT /gene="mshC" FT /locus_tag="VSAL_I0478" FT /note="HMMPfam hit to PF07963, Prokaryotic N-terminal FT methylation motif, score 1.4e-06" FT /inference="protein motif:HMMPfam:PF07963" FT CDS 534825..535418 FT /transl_table=11 FT /gene="mshD" FT /locus_tag="VSAL_I0479" FT /old_locus_tag="TVS0307" FT /product="type IV pilus, prepilin-like protein (MSHD)" FT /db_xref="InterPro:IPR001120" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:B6EM83" FT /protein_id="CAQ78164.1" FT /translation="MKGYKYNQQGLTLIESVVGIVILGFALSILVSGVFSSSEKSHKAT FT YEAQAAALGHSIMTDILSRQFDQHSDPNGGLYRCGEKNESNTLIPCSVTLGRDGDEQNV FT SVNASVFNDVDDFIGCWGKAELCSSNGLINYDFDKLIASDSANEYKNFTVEIQVNYANV FT DGGSSVSPPYKKIDITLYASQHARYTFSAYRGNY" FT misc_feature 534849..534920 FT /gene="mshD" FT /locus_tag="VSAL_I0479" FT /note="HMMPfam hit to PF07963, Prokaryotic N-terminal FT methylation motif, score 0.004" FT /inference="protein motif:HMMPfam:PF07963" FT misc_feature 534849..534911 FT /gene="mshD" FT /locus_tag="VSAL_I0479" FT /note="PS00409 Prokaryotic N-terminal methylation site." FT /inference="protein motif:ProSite:PS00409" FT misc_feature 534861..534929 FT /gene="mshD" FT /locus_tag="VSAL_I0479" FT CDS 535418..536173 FT /transl_table=11 FT /gene="mshO" FT /locus_tag="VSAL_I0480" FT /old_locus_tag="TVS0308" FT /product="exported protein MshO" FT /note="Weakly similar to Vibrio cholerae Hypothetical FT protein MshO UniProt:Q9ZA95 (256 aa) fasta scores: FT E()=2e-14, 28.846% id in 260 aa" FT /db_xref="InterPro:IPR001120" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:B6EM84" FT /inference="similar to sequence:UniProt:Q9ZA95" FT /protein_id="CAQ78165.1" FT /translation="MNRQRGFTLIELILTVVVVAIVAMAASNTLLLGFQSYSTSIDRQD FT TQMQAKFVIEKFSRELRHAVPNSIDASNGGECVSFVSIEASAFYLSLPLVGEDSIDTVI FT MSTNFLDLDNTRLTINPSTQKDLIEASSLRYVSVNSVSMSSGVSTINFSSNNNPAFISN FT STSERAFFYQPEVIEYCIQDNGVYRSRINASGDRVSTVQLANQVSSGKFEFESASMHRN FT STVRMVLAFTNGLDEVTQYQHDVQVMNVP" FT sig_peptide 535418..535492 FT /gene="mshO" FT /locus_tag="VSAL_I0480" FT misc_feature 535430..535501 FT /gene="mshO" FT /locus_tag="VSAL_I0480" FT /note="HMMPfam hit to PF07963, Prokaryotic N-terminal FT methylation motif, score 8.7e-07" FT /inference="protein motif:HMMPfam:PF07963" FT misc_feature 535430..535492 FT /gene="mshO" FT /locus_tag="VSAL_I0480" FT /note="PS00409 Prokaryotic N-terminal methylation site." FT /inference="protein motif:ProSite:PS00409" FT misc_feature 535451..535519 FT /gene="mshO" FT /locus_tag="VSAL_I0480" FT CDS 536163..536597 FT /transl_table=11 FT /gene="mshP" FT /locus_tag="VSAL_I0481" FT /old_locus_tag="TVS0309" FT /product="exported protein MshP" FT /note="Weakly similar to Vibrio cholerae MshP FT UniProt:Q9ZA94 (141 aa) fasta scores: E()=0.017, 28.676% id FT in 136 aa" FT /db_xref="UniProtKB/TrEMBL:B6EM85" FT /inference="similar to sequence:UniProt:Q9ZA94" FT /protein_id="CAQ78166.1" FT /translation="MFHNYAKQSGNILILSVIIMVVVGFLSLNLLKVETSNHDAVSKEV FT LGTQAWFLAYSGAEWGLVQLFPIGVSGADSSLCDEEIHRPNMALNNSGCSSEPEVVCVA FT TPVNHLGEVITYFKITSTAVCGSGINQVARIQEVWAKEIN" FT sig_peptide 536163..536258 FT /gene="mshP" FT /locus_tag="VSAL_I0481" FT misc_feature 536193..536285 FT /gene="mshP" FT /locus_tag="VSAL_I0481" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature 536196..536255 FT /gene="mshP" FT /locus_tag="VSAL_I0481" FT CDS join(536597..538102,538105..540891) FT /pseudo FT /transl_table=11 FT /gene="mshQ" FT /locus_tag="VSAL_I0482" FT /old_locus_tag="TVS0310" FT /product="hypothetical protein MshQ (pseudogene)" FT /note="Weakly similar to Vibrio cholerae MshQ FT UniProt:Q9ZA93 (1252 aa) fasta scores: E()=1e-07, 21.483% FT id in 917 aa. CDS contains a frameshift after codon 502. FT The sequence has been checked and is believed to be FT correct" FT /db_xref="PSEUDO:CAQ78167.1" FT /inference="similar to sequence:UniProt:Q9ZA93" FT misc_feature 538480..538503 FT /gene="mshQ" FT /locus_tag="VSAL_I0482" FT /note="PS00881 Protein splicing signature." FT /inference="protein motif:ProSite:PS00881" FT CDS 541014..542057 FT /transl_table=11 FT /gene="mreB" FT /locus_tag="VSAL_I0483" FT /old_locus_tag="TVS0312" FT /product="rod shape-determining protein MreB" FT /db_xref="GOA:B6EM87" FT /db_xref="InterPro:IPR001023" FT /db_xref="InterPro:IPR004753" FT /db_xref="UniProtKB/TrEMBL:B6EM87" FT /protein_id="CAQ78168.1" FT /translation="MFKKLRGMFSNDLSIDLGTANTLIYVKGQGIVLDEPSVVAIRQDR FT NGSAKSVAAVGHEAKRMLGRTPGNISAIRPMKDGVIADFYVTEKMLQHFIKQVHDNSFL FT RPSPRVLVCVPCGSTQVERRAIRESAQGAGAREVFLIDEPMAAAIGAGLPVSEATGSMV FT VDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEI FT GSAYPGDDVLEIEVRGRNLAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQCPPE FT LASDVSEHGMVLTGGGALLRDLDRLLTEETGIPVVVAENPLTCVALGGGKALEMIDMHG FT GDLFSDE" FT misc_feature 541041..542036 FT /gene="mreB" FT /locus_tag="VSAL_I0483" FT /note="HMMPfam hit to PF06723, MreB/Mbl protein, score FT 2e-235" FT /inference="protein motif:HMMPfam:PF06723" FT CDS 542080..542937 FT /transl_table=11 FT /gene="mreC" FT /locus_tag="VSAL_I0484" FT /old_locus_tag="TVS0313" FT /product="rod shape-determining protein MreC" FT /db_xref="GOA:B6EM88" FT /db_xref="InterPro:IPR007221" FT /db_xref="UniProtKB/TrEMBL:B6EM88" FT /protein_id="CAQ78169.1" FT /translation="MTPIFGRGPSLQLRLFIAVMVSASLMLADSRLNAFSDIRYLLNSF FT VSPIHYAANLPRTMFDGMYERFNSRNALMFENQKLKQDMFIQNSNLLLLEQLKQENSRL FT RDLLGSPFIRDEKKLVTEVMAVDSAPYTHQVMIDKGQVDGVYEGQPVISDKGIVGQINY FT VGAHNSRVLLLTDPNNAIPVQVVRNDIRVIASGKGNLNLMQLEHIPTNTDIEIGDLLVS FT SGLGGRYPEGYPVGYISSIDNNNKRPFASIELETAVEFDKLRYLLLVWPTEIEGKIKEV FT TNDE" FT misc_feature 542440..542788 FT /gene="mreC" FT /locus_tag="VSAL_I0484" FT /note="HMMPfam hit to PF04085, rod shape-determining FT protein MreC, score 1.4e-37" FT /inference="protein motif:HMMPfam:PF04085" FT CDS 542927..543418 FT /transl_table=11 FT /gene="mreD" FT /locus_tag="VSAL_I0485" FT /old_locus_tag="TVS0314" FT /product="rod shape-determining protein MreD" FT /db_xref="GOA:B6EM89" FT /db_xref="InterPro:IPR007227" FT /db_xref="UniProtKB/TrEMBL:B6EM89" FT /protein_id="CAQ78170.1" FT /translation="MTSSHLMRGRVIIWLSFLIALILQAAPWPGTLEVLRPSWIILVTF FT YWVLALPHRVNVGTAMILGILWDLLLGTTLGIRGMTMAILVYLVAANFKLLRNLALWQQ FT AAIFSALTLLGKLLEFLGEFLVHDVSFNGHFLWAGVLNFILWPWLFLLMRRVRRHWSIR FT " FT sig_peptide 542927..543001 FT /gene="mreD" FT /locus_tag="VSAL_I0485" FT misc_feature 542945..543394 FT /gene="mreD" FT /locus_tag="VSAL_I0485" FT /note="HMMPfam hit to PF04093, rod shape-determining FT protein MreD, score 2.4e-34" FT /inference="protein motif:HMMPfam:PF04093" FT misc_feature order(542957..543010,543038..543097,543131..543199, FT 543323..543382) FT /gene="mreD" FT /locus_tag="VSAL_I0485" FT misc_feature 543086..543217 FT /gene="mreD" FT /locus_tag="VSAL_I0485" FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT CDS 543428..544003 FT /transl_table=11 FT /locus_tag="VSAL_I0486" FT /old_locus_tag="TVS0315" FT /product="Maf-like protein" FT /note="Putative inhibitor of septum formation" FT /db_xref="GOA:B6EM90" FT /db_xref="InterPro:IPR003697" FT /db_xref="UniProtKB/TrEMBL:B6EM90" FT /protein_id="CAQ78171.1" FT /translation="MSNQLFLASGSPRRKELLQQLGYQFEIVTVDVEEQHQSHESPLEY FT VERLSKDKAQAGLRVVEQNKNTIVPVLGSDTIVVIDGVILEKPTDFEDAKRMLLALSGR FT QHQVMTAVTLMTPEKTRTKTVITQVWFKTLSEQEIKTYWESGEPCDKAGSYGIQGSGGR FT FVSRIDGSYHAVMGLPLMETDQLLHQFL" FT misc_feature 543434..544000 FT /locus_tag="VSAL_I0486" FT /note="HMMPfam hit to PF02545, Maf-like protein, score FT 3.7e-66" FT /inference="protein motif:HMMPfam:PF02545" FT CDS 544023..545492 FT /transl_table=11 FT /gene="cafA" FT /locus_tag="VSAL_I0487" FT /old_locus_tag="TVS0316" FT /product="ribonuclease G" FT /EC_number="3.1.4.-" FT /db_xref="GOA:B6EM91" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR004659" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR019307" FT /db_xref="InterPro:IPR022967" FT /db_xref="UniProtKB/TrEMBL:B6EM91" FT /protein_id="CAQ78172.1" FT /translation="MSTELLINVTPSETRVAMIEAGVLQEIHVEREARRGIVGNIYKGR FT VSRVLPGMQAAFIDIGLDKAAFLHASDIVPHTECVSENEKRQFQVRDISQLVHQGQDLV FT VQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESEKERNRLKNTVSDYCD FT EFGGFIIRTAAEGAKEAEISQDAAFLKRLWHKVIERRKKSKTKSMLYGELGLDQRILRD FT FVGTELDLIRVDSKQAFEKLKEFTTEFVPELTKKLEYYSGDKPIFDMYETENEIQRALD FT RKVELKSGGYLIIDQTEAMTTVDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNL FT GGIIIIDFIDMMSEEHRRRVLQVLGAALDKDRVKTNINGFTQLGLVEMTRKRTRESIEH FT VLCGQCPTCEGRGAVKTVESVCYEILREITRVNRAYDSDKFVVYAAVAVADALQGEESH FT ALAELELFIGKQVKIQAEPLYIQEQFDVVMM" FT misc_feature 544125..544388 FT /gene="cafA" FT /locus_tag="VSAL_I0487" FT /note="HMMPfam hit to PF00575, S1 RNA binding domain,score FT 2.9e-15" FT /inference="protein motif:HMMPfam:PF00575" FT CDS 545504..549367 FT /transl_table=11 FT /locus_tag="VSAL_I0488" FT /old_locus_tag="TVS0317" FT /product="putative exported protein" FT /db_xref="InterPro:IPR011836" FT /db_xref="UniProtKB/TrEMBL:B6EM92" FT /protein_id="CAQ78173.1" FT /translation="MTTKLIRTERCLMGLLLLVFLLAALVITSLRLLLPTLNKYQPEIE FT QLLSQSTGFSISIGEVKGRWRNTNPSLNLTKLTATDPNTGDEIISVGSVEIQLNILSSL FT WAQQPQFADLRIDKLTADLTSLGNDKSEENKLEVDDKNTEDSLSKRLEDLFLVRLNHFS FT IKNSHVTFTALNGNEKTILIDSLQWRNESRKHLAEGVVSVLGSEINQLKVIANFKEKGT FT FKSLDGDFYVEAQNIQITPWIKDNIQQEYGVTEGEVSVNAWLSFKNGQPIDALVEAAPS FT YINWEEDKTIHKLSIESGVFELQPEKEGWKVISSGIQIKHEDDEWPELAGNFVWQPSKW FT ILNLGHIDLENALGLKTLLPASQDEITNLLGTLNPKGDIDDIRVEYDATTGLNYSASIH FT AAGMNQWELLPGFHKLDILVAGDETKGKAELSLVDDTLPYGDVFQAPLNIENAKVTAYW FT KVNDEGWRLWSDYIDVSTPDLQAKGEFRLDFPKDKPSVLSFYAEADAFNADQTWRYLPT FT LALGQDLTDYLSSAVQGGSAKTVQLLWYGELSDFPYTKYDGIFQIKVGLKDAKFSFDTA FT WPPLTNLQLDLMFQNASMFLSSHSADLMGVHATRVTGQIANLAEDGKLTIRARANGSGK FT AVREYMTATPLVDSVGAALNSIQIDNRVDALLRLDIPFNSEDVRAWGYADLANNHIELQ FT SPNIELTNAKGRIEFDNDVVKAKGIKASLLGQPISLSFNGETQSDFYGVNIDVKGKWNI FT DPLREYIDSPLIDKVKGTSIWDTSINLQMADVGFTYQIGMDAALNDIQSTLPYPLALEK FT GSTDKAVLQVSGNAERLSGRLIFPDAKYQAEISIDKETPVIDASYLIVGRGNFKVSPIV FT GHSASLNTKNLDADAWIEEPIQSKEKPSSGSKSKASSFPVIPMPTRIDTDIKSLRLASI FT DWNDVNADIRKKSQGWYFQVQSQEVDGKATWKNNEALAVQLDNLHIFIPSLDNVDSEGG FT LNYAKAKDPLISSFDREFFKLMPNLELTIKDTWVQGYKLGKVETKLHKKNDTFYLDTLN FT IVSGKNKFSMTGDWKLNKESSKSSFSANASGDDNSELLARFGISTGIQNATYTMSANLN FT WDGAPWRIKTNTLAGDLASTLDEGVITDVKGAARFLGLFSMDSIIRKMKLDFRDVFDDG FT MAFNSITGSGEMRKGVFVSNNLVMDAVAGEMKIKGKADLNTRLVDAEVNFTPDLTSGIP FT IITAFAVAPQTAIIVLAVATAISPVIDVITQVNYKVEGPLDAPTVKELSRSQGEYKLPE FT SNE" FT sig_peptide 545504..545581 FT /locus_tag="VSAL_I0488" FT misc_feature 545537..545605 FT /locus_tag="VSAL_I0488" FT CDS 549469..550233 FT /transl_table=11 FT /locus_tag="VSAL_I0489" FT /old_locus_tag="TVS0318" FT /product="putative carbon-nitrogen hydrolase" FT /db_xref="GOA:B6EM93" FT /db_xref="InterPro:IPR001110" FT /db_xref="InterPro:IPR003010" FT /db_xref="UniProtKB/TrEMBL:B6EM93" FT /protein_id="CAQ78174.1" FT /translation="MKQLKLNLKGLHQQGAKLALTPENTLVFGQKEDYEKHAEPLGKGP FT LQEKLAKLAKHYHLWLIIGSFPIRNADGSLSSTCLVFNHDGDLVEHYHKLHMFDVDVED FT GHQSYRESDTFTAGSEIKVVDTPIGKIGLSICYDVRFPQLYSELRQQGAEILIVPAAFT FT KVTGYAHWDILLRSRAIENQCWLLAAGQWGSHGSGRETWGHSMVVDPWGNKVVTQREGT FT GVIAAEIDKNQTTAIRKKMPVAQHARLACNIQ" FT misc_feature 549475..549951 FT /locus_tag="VSAL_I0489" FT /note="HMMPfam hit to PF00795, Carbon-nitrogen FT hydrolase,score 2.2e-27" FT /inference="protein motif:HMMPfam:PF00795" FT misc_feature 549862..549924 FT /locus_tag="VSAL_I0489" FT /note="PS01227 Uncharacterized protein family UPF0012 FT signature." FT /inference="protein motif:ProSite:PS01227" FT CDS 550344..551789 FT /transl_table=11 FT /gene="tldD" FT /locus_tag="VSAL_I0490" FT /old_locus_tag="TVS0319" FT /product="protein TldD" FT /function="suppresses the inhibitory activity of the carbon FT storage regulator (CsrA) in E.coli" FT /db_xref="InterPro:IPR002510" FT /db_xref="UniProtKB/TrEMBL:B6EM94" FT /protein_id="CAQ78175.1" FT /translation="MSLQEVEQSLLNQAGIGQQELSQTLSSIAKRDVDYADIYFQSCWH FT ESLVLEDSIIKDGSFNIDRGVGIRAVAGEKTGFAYSDQINLDALKQSAKAARGIVQQGG FT SGKVNAFTAQPIPQFYAPMNPLNSLDKQKKIALLQEVDVYIRAKEPLIQEVSVSISGVY FT EQMLVAALDGTYAADIRPLVRLSISVLVQRGDKRERGSAGGGGRYGYDYFLTEVDGKSI FT ALEFADEAIRQALVNLDAEAAPAGMMPVVLGSGWPGVLLHEAVGHGLEGDFNRKGSSVF FT SGKLGDKVTSSVCTIVDDGTMLDRRGSLNVDDEGVPGQYNTLIENGVLKGYMQDKLNAR FT LMGVAPTGNGRRESYAHLPMPRMTNTYMLPGEHTPEEIISTVKKGIYAPNFGGGQVDIT FT SGKFVFSASEAYLIEDGKITRPVKGATLIGSGIEAMQQISMVGNDLSLDRGVGVCGKAG FT QSVPVGVGQPTLKLDALTVGGTE" FT misc_feature 550443..551339 FT /gene="tldD" FT /locus_tag="VSAL_I0490" FT /note="HMMPfam hit to PF01523, Putative modulator of DNA FT gyrase, score 9.6e-89" FT /inference="protein motif:HMMPfam:PF01523" FT CDS complement(551887..552426) FT /transl_table=11 FT /locus_tag="VSAL_I0491" FT /old_locus_tag="TVS0320" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR006839" FT /db_xref="InterPro:IPR023153" FT /db_xref="UniProtKB/TrEMBL:B6EM95" FT /protein_id="CAQ78176.1" FT /translation="MKTMARKNQKAPWEEEEEIIWVSRTEMKNDMEAIQKLGEELVGLK FT PAVLAKFPLSELLQIAIFDAQRFRNEAKRRQLQYIGKLMRLEDPEAIQAALDKVRNKHS FT QTTIALQKLEILRDRMIETPDAVIEDLMVKYPEADRQRFRQLARQAKKEKESNKPPKAY FT REIFQVLKDLYLAKDL" FT misc_feature complement(551896..552417) FT /locus_tag="VSAL_I0491" FT /note="HMMPfam hit to PF04751, Protein of unknown function FT (DUF615), score 1.7e-96" FT /inference="protein motif:HMMPfam:PF04751" FT CDS 552536..553879 FT /transl_table=11 FT /gene="pmbA" FT /locus_tag="VSAL_I0492" FT /old_locus_tag="TVS0321" FT /product="protein PmbA (protein TldE)" FT /db_xref="InterPro:IPR002510" FT /db_xref="UniProtKB/TrEMBL:B6EM96" FT /protein_id="CAQ78177.1" FT /translation="MDAKAQMMNQKIELEAAVAKALEMATKHASAAEVAITKTTGISVS FT TLMGEVENVEFNRDGALGITVYRGHRKGSASTSDLSDKAIQETVAAALDIANYTSEDPF FT SGPAPKELMAQNIPDLDLFHPDDPEPDYAAQKAIEAEEAALAYHSSIKQSDGASYDSHY FT GIKVYGNSHGMLASYPSSRHSISCSVIGVDKNGNMERDYSYTVARHRDDLWDAKKVGLD FT AAERTVSRLDAQKLNTMKVPVMFSADVATGLIGHLVMAISGANLYRKSTFMLDKLNEKI FT LPDWFNVSERPHILKGLASSPFDSEGLYTQDREIITDGVLATYLLTSYAARKLNMTPTG FT HAGGIHNWFVKSTGQSFDQMLKTMGTGLLVTELMGQGVNTVTGDYSRGAAGFWVENGEI FT QYPVSEITIAGNLAEMYQNIIAVGSDVETRSQIQTGSILIESMKIAGQ" FT misc_feature 552623..553507 FT /gene="pmbA" FT /locus_tag="VSAL_I0492" FT /note="HMMPfam hit to PF01523, Putative modulator of DNA FT gyrase, score 3.8e-64" FT /inference="protein motif:HMMPfam:PF01523" FT CDS complement(553963..555318) FT /transl_table=11 FT /locus_tag="VSAL_I0493" FT /old_locus_tag="TVS0322" FT /product="magnesium transporter" FT /db_xref="GOA:B6EM97" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR006667" FT /db_xref="InterPro:IPR006668" FT /db_xref="InterPro:IPR006669" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:B6EM97" FT /protein_id="CAQ78178.1" FT /translation="MQELQDFDQTHQTLQEVSNALDSGMFVHVRRLLQDMEPEDIAHLL FT EASPRKSRNVLWQLTDPEDYGEILDELSEDVKDGIVSRMNPESIAEATEGMETDDVAYV FT LRSLPNDLSREILSQMDTVDRFRVETALSYPEDTAGGMMNTDFITIRADVEIDVVLRYL FT RMKGDLPESTDALYVLDEESRLIGHLSLTTLLTTQQDTLVSDVMSDADEAIPVNTDDGE FT VANLFERRNWVSAPVVDENHLLLGRITIDDVVDVIREDAEHSMMSMAGMDDEEDTFAPV FT VKSARRRSVWLGMNVLAALAAASVSNMFEATLAQMASIAVLMTIVPSMGGVAGNQTVAL FT VIRGLAVGHIGDSNQKELLMKEAGIGLLNGILWASIIGGIVMVWKSDMMLGAIISAAML FT VNLTVAGIAGVSIPLILKKMNIDPALAGGMALTTITDIIGLFAFLGLATILM" FT misc_feature complement(order(553969..554037,554080..554148, FT 554167..554235,554293..554361,554380..554448)) FT /locus_tag="VSAL_I0493" FT misc_feature complement(553978..554355) FT /locus_tag="VSAL_I0493" FT /note="HMMPfam hit to PF01769, Divalent cation transporter, FT score 1.5e-14" FT /inference="protein motif:HMMPfam:PF01769" FT misc_feature complement(554545..554898) FT /locus_tag="VSAL_I0493" FT /note="HMMPfam hit to PF00571, CBS domain pair, score FT 2.6e-11" FT /inference="protein motif:HMMPfam:PF00571" FT misc_feature complement(554902..555288) FT /locus_tag="VSAL_I0493" FT /note="HMMPfam hit to PF03448, MgtE intracellular FT domain,score 4.7e-44" FT /inference="protein motif:HMMPfam:PF03448" FT CDS complement(555630..555908) FT /transl_table=11 FT /gene="ptsO" FT /locus_tag="VSAL_I0494" FT /old_locus_tag="TVS0323" FT /product="phosphocarrier protein NPr" FT /db_xref="GOA:B6EM98" FT /db_xref="InterPro:IPR000032" FT /db_xref="InterPro:IPR005698" FT /db_xref="UniProtKB/TrEMBL:B6EM98" FT /protein_id="CAQ78179.1" FT /translation="MPISSRHLLIKNRLGLHARAAIKLVEMAQSFKATITITNDENLQA FT TADGVMGLLMLDSAQGQYVDVSADGPDAVQALNAICELIEAGFDEDE" FT misc_feature complement(555648..555902) FT /gene="ptsO" FT /locus_tag="VSAL_I0494" FT /note="HMMPfam hit to PF00381, PTS HPr component FT phosphorylation site, score 1.4e-23" FT /inference="protein motif:HMMPfam:PF00381" FT CDS complement(555911..556765) FT /transl_table=11 FT /locus_tag="VSAL_I0495" FT /old_locus_tag="TVS0324" FT /product="ATP/GTP-binding protein" FT /db_xref="GOA:B6EM99" FT /db_xref="InterPro:IPR005337" FT /db_xref="UniProtKB/Swiss-Prot:B6EM99" FT /protein_id="CAQ78180.1" FT /translation="MKLMVVSGNSGAGKSVALRVLEDLGYYCVDNLPVDLLAQFVESIQ FT HSSQNVAVSVDIRNLPKDPSLLKNTLTELKKSHDVTVIFLDAEDKELIKRYSETRRLHP FT LSLIGEQCSLEQAVELEKSILCHFKEDADLVLDTTSKSIHDLSETLRSRILGRESKELV FT MVFESFGFKHGLPTDADYVFDVRFLPNPHWEPTLRPMTGLDKPVADYLEKHAEVIQLKE FT QIQHFLMTWLPALEKNNRSYLTVAIGCTGGQHRSVYITQQLGEYFKQQGQQVQIRHKTL FT ERH" FT misc_feature complement(555914..556765) FT /locus_tag="VSAL_I0495" FT /note="HMMPfam hit to PF03668, P-loop ATPase protein FT family, score 3.3e-153" FT /inference="protein motif:HMMPfam:PF03668" FT misc_feature complement(556721..556744) FT /locus_tag="VSAL_I0495" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(556789..557235) FT /transl_table=11 FT /gene="ptsN" FT /locus_tag="VSAL_I0496" FT /old_locus_tag="TVS0325" FT /product="nitrogen regulatory IIA protein, PTS system" FT /EC_number="2.7.1.-" FT /db_xref="GOA:B6EMA0" FT /db_xref="InterPro:IPR002178" FT /db_xref="InterPro:IPR006320" FT /db_xref="InterPro:IPR016152" FT /db_xref="UniProtKB/TrEMBL:B6EMA0" FT /protein_id="CAQ78181.1" FT /translation="MQLSTILSLDCTKSAVQCTSKKRALELISEIAAPQLGQNPQALFE FT SLLNREKMGSTGIGNGIAIPHGRLHNCDTAVAVLIQCQEPIEFDSIDNRPVDVLFALLV FT PDEQCKLHLKTLSSVAEKLNDKQILRQLRHAESDQELYQIFTSE" FT misc_feature complement(556792..557223) FT /gene="ptsN" FT /locus_tag="VSAL_I0496" FT /note="HMMPfam hit to PF00359,Phosphoenolpyruvate-dependent FT sugar phosph, score 1.4e-37" FT /inference="protein motif:HMMPfam:PF00359" FT misc_feature complement(557035..557085) FT /gene="ptsN" FT /locus_tag="VSAL_I0496" FT /note="PS00372 PTS EIIA domains phosphorylation site FT signature 2." FT /inference="protein motif:ProSite:PS00372" FT CDS complement(557237..557524) FT /transl_table=11 FT /locus_tag="VSAL_I0497" FT /old_locus_tag="TVS0326" FT /product="sigma-54 modulation protein" FT /db_xref="GOA:B6EMA1" FT /db_xref="InterPro:IPR003489" FT /db_xref="UniProtKB/TrEMBL:B6EMA1" FT /protein_id="CAQ78182.1" FT /translation="MQINITGQNVELTDSLREYVDTKFQKLERFFEHIHNVHVVLKLEK FT VHHVAEATLHVNQGDIHAHSDSEDMYAAIDGLVDKLIRQLNKHKEKLSSH" FT misc_feature complement(557240..557521) FT /locus_tag="VSAL_I0497" FT /note="HMMPfam hit to PF02482, Sigma 54 modulation protein FT / S30EA r, score 1.2e-45" FT /inference="protein motif:HMMPfam:PF02482" FT CDS complement(557544..559013) FT /transl_table=11 FT /gene="rpoN" FT /locus_tag="VSAL_I0498" FT /old_locus_tag="TVS0327" FT /product="RNA polymerase sigma-54 factor (sigma-N)" FT /db_xref="GOA:B6EMA2" FT /db_xref="InterPro:IPR000394" FT /db_xref="InterPro:IPR007046" FT /db_xref="InterPro:IPR007634" FT /db_xref="UniProtKB/TrEMBL:B6EMA2" FT /protein_id="CAQ78183.1" FT /translation="MKASLQLKMGQQLAMTPQLQQAIRLLQLSTLDLQQEIQEALDSNP FT LLDVEEEQLSTPESLLSPEPTPEKETATAEQEPSVTDSSDVIDSNNISEELEMDASWDD FT VYSANSGSTGLAIDDDTPLYQGETTESLQDYLMWQAELTPFTEVDRAIATTIIESLDEY FT GYLTISLDDVLESIGNEEVELDEVEAVLKRIQHFDPLGVASRDLAECLMIQLATYPVDT FT PWLPETQLILTKHINLLGNRDYRQLAKETKLKEYDLKQVMMLIHQLDPRPGNRVIDTDT FT EYVIPDVSVFKHNGKWVVTINPDSVPRLKVNAEYAALGKGLGNSPDGQFIRTNLQEAKW FT LIKSLESRNETLLKVARCIVEHQQDFFEYGEEAMKPMVLNDIALDVEMHESTISRVTTQ FT KFMHTPRGIFELKYFFSSHVSTDSGGECSSTAIRALVKKLVAAENQAKPLSDSKIATLL FT AEQGIQVARRTIAKYRESLGIAPSNQRKRLL" FT misc_feature complement(557553..558032) FT /gene="rpoN" FT /locus_tag="VSAL_I0498" FT /note="HMMPfam hit to PF04552, Sigma-54, DNA binding FT domain, score 3.2e-112" FT /inference="protein motif:HMMPfam:PF04552" FT misc_feature complement(557592..557615) FT /gene="rpoN" FT /locus_tag="VSAL_I0498" FT /note="PS00718 Sigma-54 factors family signature 2." FT /inference="protein motif:ProSite:PS00718" FT misc_feature complement(557820..557885) FT /gene="rpoN" FT /locus_tag="VSAL_I0498" FT /note="Predicted helix-turn-helix motif with score FT 1190.000, SD 3.24 at aa 377-398, sequence FT MVLNDIALDVEMHESTISRVTT" FT misc_feature complement(557829..557888) FT /gene="rpoN" FT /locus_tag="VSAL_I0498" FT /note="PS00717 Sigma-54 factors family signature 1." FT /inference="protein motif:ProSite:PS00717" FT misc_feature complement(558066..558662) FT /gene="rpoN" FT /locus_tag="VSAL_I0498" FT /note="HMMPfam hit to PF04963, Sigma-54 factor, core FT binding domain, score 1.4e-103" FT /inference="protein motif:HMMPfam:PF04963" FT misc_feature complement(558861..559007) FT /gene="rpoN" FT /locus_tag="VSAL_I0498" FT /note="HMMPfam hit to PF00309, Sigma-54 factor, Activator FT interacting do, score 1.4e-20" FT /inference="protein motif:HMMPfam:PF00309" FT misc_feature complement(558879..558998) FT /gene="rpoN" FT /locus_tag="VSAL_I0498" FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT CDS complement(559040..559765) FT /transl_table=11 FT /locus_tag="VSAL_I0499" FT /old_locus_tag="TVS0328" FT /product="ABC transport protein, ATP-binding component" FT /db_xref="GOA:B6EMA3" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EMA3" FT /protein_id="CAQ78184.1" FT /translation="MAILEAKNLAKTYGSRKVVSDVSLTVESGKIVGLLGPNGAGKTTS FT FYMIVGLVSRDEGSITIDGVDISLQPMHNRSKMGIGYLPQEASIFRKLSVFDNIMAVLQ FT TRKDLSKAERLDKLEELLDEFNIQHIRNSNGMALSGGERRRVEIARALAANPKFILLDE FT PFAGVDPISVIDIKKIIQHLRDRGLGVLITDHNVRETLDVCEHAYIVSQGHMIANGTPE FT HVLNDEHVKRVYLGDQFKL" FT misc_feature complement(559127..559681) FT /locus_tag="VSAL_I0499" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.6e-59" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(559310..559354) FT /locus_tag="VSAL_I0499" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(559637..559660) FT /locus_tag="VSAL_I0499" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(559768..560268) FT /transl_table=11 FT /locus_tag="VSAL_I0500" FT /old_locus_tag="TVS0329" FT /product="putative exported protein" FT /db_xref="GOA:B6EMA4" FT /db_xref="InterPro:IPR005653" FT /db_xref="InterPro:IPR014340" FT /db_xref="UniProtKB/TrEMBL:B6EMA4" FT /protein_id="CAQ78185.1" FT /translation="MKLSHVSLLAGLLFSSSSWALSTDTEQPIHINSDTQNFDMQSNRV FT TFNGDVTLKQGSIKIFADKLIVIRPQGQEGREILEAYGKPARFSQLTDDGKTLRGKANK FT LRYELENEFLTMTDNAELTQDDSVIQGKVITYNMKTQKLIADGGKDERVTTILQPSQLN FT KKQ" FT misc_feature complement(559843..560265) FT /locus_tag="VSAL_I0500" FT /note="HMMPfam hit to PF03968, OstA-like protein, score FT 6.8e-60" FT /inference="protein motif:HMMPfam:PF03968" FT sig_peptide complement(560209..560268) FT /locus_tag="VSAL_I0500" FT CDS complement(560249..560812) FT /transl_table=11 FT /locus_tag="VSAL_I0501" FT /old_locus_tag="TVS0330" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR010664" FT /db_xref="UniProtKB/TrEMBL:B6EMA5" FT /protein_id="CAQ78186.1" FT /translation="MTLKHLFMTLLLLIASWSGYYLYYEYAKSEQQVIPDLQTPVFTGK FT NVSNNNYDENGVRNYQINAKALARFAQTGNTNFTIPHLFVFKEGKVKEWEIISDVGVLN FT KDHTLYLTGNVIIKNLLPEAAFDTMTTDSMTIELTTKDFMTDDVVNLVGPTFETTGVGM FT KGNFTSQQTTLLENVQGIYEAFTR" FT misc_feature complement(560264..560791) FT /locus_tag="VSAL_I0501" FT /note="HMMPfam hit to PF06835, Protein of unknown function FT (DUF1239), score 1.3e-56" FT /inference="protein motif:HMMPfam:PF06835" FT misc_feature complement(560741..560800) FT /locus_tag="VSAL_I0501" FT CDS complement(560809..561366) FT /transl_table=11 FT /gene="kdsC" FT /locus_tag="VSAL_I0502" FT /old_locus_tag="TVS0331" FT /product="3-deoxy-d-manno-octulosonate 8-phosphate FT phosphatase" FT /EC_number="3.1.3.45" FT /db_xref="GOA:B6EMA6" FT /db_xref="InterPro:IPR010023" FT /db_xref="InterPro:IPR013200" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:B6EMA6" FT /protein_id="CAQ78187.1" FT /translation="MPTMIETLYGEVEESILSIAKTIKLLICDVDGVFSDGLVYMGNDG FT EELKTFHTRDGYGVKSLMSAGVEVAIITGRNSQIVENRMRALGISLIYQGQDNKLQAYE FT DILTKLNIAPEHTGYIGDDLIDWPVMEKVALKVCVADGHPLLVKRANYVTTIKGGHGAV FT REVSDLILEAKGELEQHKGLSI" FT CDS complement(561366..562340) FT /transl_table=11 FT /gene="kdsD" FT /locus_tag="VSAL_I0503" FT /old_locus_tag="TVS0332" FT /product="arabinose 5-phosphate isomerase" FT /EC_number="5.3.1.13" FT /db_xref="GOA:B6EMA7" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR001347" FT /db_xref="InterPro:IPR004800" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:B6EMA7" FT /protein_id="CAQ78188.1" FT /translation="MATQFDFCKAGKNVLQIEIDALTQLNNYINDDFTKACQLMLECKR FT KVVIMGMGKSGHIGKKIAATLASTGTPSFFVHPGEASHGDLGMIEKGDVILAISNSGEA FT AEILALLPVIKRQGITLITMTSKSSSSMANVADVNLLITVPQEACPLALAPTSSTTATL FT VMGDALAMALLEARGFTSDDFALSHPGGALGRKLLLHLADIMHTDDELPMVTSDALIKT FT ALLEVSEKGLGMTAIVDEDQKVIGIFTDGDLRRLLDNRIDIHTQTIGEVMAHTPSVASP FT NLLAVEGLNLMQDKKINGLLLCDENNRLVGALNMHDLLKAGVM" FT misc_feature complement(561372..561728) FT /gene="kdsD" FT /locus_tag="VSAL_I0503" FT /note="HMMPfam hit to PF00571, CBS domain pair, score FT 1.4e-22" FT /inference="protein motif:HMMPfam:PF00571" FT misc_feature complement(561822..562232) FT /gene="kdsD" FT /locus_tag="VSAL_I0503" FT /note="HMMPfam hit to PF01380, SIS domain, score 9.5e-36" FT /inference="protein motif:HMMPfam:PF01380" FT CDS complement(562544..563512) FT /transl_table=11 FT /locus_tag="VSAL_I0504" FT /old_locus_tag="TVS0333" FT /product="sodium/calcium exchanger protein" FT /note="Similar to Escherichia coli Inner membrane protein FT YrbG UniProt:P45394 (325 aa) fasta scores: FT E()=9e-44,44.688% id in 320 aa" FT /db_xref="GOA:B6EMA8" FT /db_xref="InterPro:IPR004481" FT /db_xref="InterPro:IPR004837" FT /db_xref="UniProtKB/TrEMBL:B6EMA8" FT /inference="similar to sequence:UniProt:P45394" FT /protein_id="CAQ78189.1" FT /translation="MTELLMPSLLLVVGLSLLVWGADKLVFGSAALAKNYGISPLVIGM FT TILAMGSSAPEMMVSAAAALDGKTDTAVGNVIGSNIANIALILGITALIKPLAISSGII FT RRELPLMLIVTLLAGGIMYDNYLGFNEGILLVALFIAFILAMLYISRKEQPNGDTLLNE FT QESEIPDGVPNGKAIFWVVVGLALLPLGANMLIDNAVIIAKHFGMSDLVIGLTIIAIGT FT SLPELAASVAGVLKGEDDMAVGNIIGSNVFNILAVMGIPALLHPSSISEYIMSRDFYVM FT LGVSVLLLIMALGKSRSINRIEGGILVTCFLIYQGFLFYTM" FT misc_feature complement(order(562550..562609,562628..562681, FT 562724..562792,562811..562879,562907..562975, FT 563066..563134,563144..563212,563231..563299, FT 563342..563410,563447..563503)) FT /locus_tag="VSAL_I0504" FT misc_feature complement(562559..562957) FT /locus_tag="VSAL_I0504" FT /note="HMMPfam hit to PF01699, Sodium/calcium exchanger FT protein, score 5.8e-42" FT /inference="protein motif:HMMPfam:PF01699" FT misc_feature complement(563075..563467) FT /locus_tag="VSAL_I0504" FT /note="HMMPfam hit to PF01699, Sodium/calcium exchanger FT protein, score 2.9e-36" FT /inference="protein motif:HMMPfam:PF01699" FT misc_feature complement(563306..563329) FT /locus_tag="VSAL_I0504" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT sig_peptide complement(563450..563512) FT /locus_tag="VSAL_I0504" FT CDS 563711..564517 FT /transl_table=11 FT /locus_tag="VSAL_I0505" FT /old_locus_tag="TVS0334" FT /product="toluene tolerance protein Ttg2A" FT /db_xref="GOA:B6EMA9" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EMA9" FT /protein_id="CAQ78190.1" FT /translation="MDTQPILVKVDNLTFRRGNRVIFDDISLFVPKGKITAIMGPSGIG FT KTTLLRLIGGQILPESGDIHFEGWNIPKLGRKALYLARKKMGMLFQSGALFTDMNVFDN FT VAFPLREHTQLSEEFIRTLVLLKLEAVGLRGASELMPSELSGGMARRAALARAIALDPD FT LIMYDEPFVGQDPITMGVLVELIRNLNDALGLTSVVVSHDVPEVMSIADHVYLLANGKI FT IAQGSPFELENNPDPQVRQFLDGRSDGPVPFRFPSKPLVEELFPGE" FT misc_feature 563807..564370 FT /locus_tag="VSAL_I0505" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 5.2e-49" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature 563828..563851 FT /locus_tag="VSAL_I0505" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 564140..564184 FT /locus_tag="VSAL_I0505" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 564510..565304 FT /transl_table=11 FT /locus_tag="VSAL_I0506" FT /old_locus_tag="TVS0335" FT /product="toluene tolerance protein Ttg2B" FT /db_xref="InterPro:IPR003453" FT /db_xref="UniProtKB/TrEMBL:B6EMB0" FT /protein_id="CAQ78191.1" FT /translation="MSNFSLILFVENIGKRALSTCEAIGRATFMLFGAIIAKPQPVRMF FT PLLLQQLYSVGVLSLVIIVVSGLFIGMVISLQGYVILVDYGAETSLGQLVSLSLLRELG FT PVVTALLFAGRAGSALTAEIGLMKTTEQLSSMEMMAIDPLRRIIAPRLWAGVISMPLLA FT MIFMAVGIWGGQIVGVEWKGIDHGSFWSVMQASVDVRHDIVNSLIKCVVFAFVVTWIAL FT FNGYDATPTSEGISLATTRTVVHSSLAVLGIDFVLTALMFGN" FT misc_feature 564558..565295 FT /locus_tag="VSAL_I0506" FT /note="HMMPfam hit to PF02405, Domain of unknown function FT DUF140, score 1.6e-117" FT /inference="protein motif:HMMPfam:PF02405" FT misc_feature order(564663..564731,564963..565031,565116..565178, FT 565236..565295) FT /locus_tag="VSAL_I0506" FT CDS 565307..565801 FT /transl_table=11 FT /locus_tag="VSAL_I0507" FT /old_locus_tag="TVS0336" FT /product="toluene tolerance protein Ttg2C" FT /db_xref="InterPro:IPR003399" FT /db_xref="UniProtKB/TrEMBL:B6EMB1" FT /protein_id="CAQ78192.1" FT /translation="MQQTRKIELLVGFFVLAGAAALLMLLLKVADVRSGGSGEYYTINA FT QFDNIGSLKSRSPVKIGGVVVGRVSGITLDIESYLPVVSMQIDKQFGQFPETSAAQILT FT AGLIGEQYVGIVPGFIDEDIDMLGEGDYIEDTKSALVLEDMIGQVLYSIGGDSSEKSED FT K" FT sig_peptide 565307..565396 FT /locus_tag="VSAL_I0507" FT misc_feature 565325..565384 FT /locus_tag="VSAL_I0507" FT misc_feature 565421..565660 FT /locus_tag="VSAL_I0507" FT /note="HMMPfam hit to PF02470, mce related protein, score FT 4.5e-18" FT /inference="protein motif:HMMPfam:PF02470" FT CDS 565801..566442 FT /transl_table=11 FT /locus_tag="VSAL_I0508" FT /old_locus_tag="TVS0337" FT /product="toluene tolerance protein Ttg2" FT /db_xref="InterPro:IPR008869" FT /db_xref="InterPro:IPR023094" FT /db_xref="UniProtKB/TrEMBL:B6EMB2" FT /protein_id="CAQ78193.1" FT /translation="MKLGMKIVGIILSLFIGVAQAEPIDKTKPYEMMTKVSEDTFARLK FT AEQVAIQKDPNILKTVVEEELMPYVNVKYAAYKLLGPHLKKTTAAEREQFVTAFRGYLV FT SSYAQVLTLYTDQKIELEKPKAIPEKKSIISVRVDILDSARPTVKVDFKLRKNKKTSEW FT QAFDMVAEGVSLLSTKQSEWSAKIRKEGIESVSKELTSLAAQPIRLEGSK" FT sig_peptide 565801..565863 FT /locus_tag="VSAL_I0508" FT misc_feature 565870..566409 FT /locus_tag="VSAL_I0508" FT /note="HMMPfam hit to PF05494, Toluene tolerance, FT Ttg2,score 1.7e-63" FT /inference="protein motif:HMMPfam:PF05494" FT CDS 566442..566762 FT /transl_table=11 FT /locus_tag="VSAL_I0509" FT /old_locus_tag="TVS0338" FT /product="conserved hypothetical protein containing" FT /db_xref="InterPro:IPR002645" FT /db_xref="UniProtKB/TrEMBL:B6EMB3" FT /protein_id="CAQ78194.1" FT /translation="MSEMDLCEAKSDEISFKGTLDRETVPNLWNKLTEWKPKLEQVKVD FT LTHVNRIDSAGVVLLLHLIEHAKKQNCHIMLAFVPDQLITLIQLSNVESLFADHLITQK FT VE" FT misc_feature 566448..566732 FT /locus_tag="VSAL_I0509" FT /note="HMMPfam hit to PF01740, STAS domain, score 0.0017" FT /inference="protein motif:HMMPfam:PF01740" FT CDS 566762..567019 FT /transl_table=11 FT /locus_tag="VSAL_I0510" FT /old_locus_tag="TVS0339" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR002634" FT /db_xref="UniProtKB/TrEMBL:B6EMB4" FT /protein_id="CAQ78195.1" FT /translation="MDSAEIKELLDAALQLQEIHVKGEGSHFEVIAVDESFNGMNRVKK FT QQTIYGPLMEHISTNTIHALSIKAFTPEEWARDKKLNSLF" FT misc_feature 566762..566986 FT /locus_tag="VSAL_I0510" FT /note="HMMPfam hit to PF01722, BolA-like protein, score FT 4.3e-33" FT /inference="protein motif:HMMPfam:PF01722" FT CDS 567032..568300 FT /transl_table=11 FT /gene="murA" FT /locus_tag="VSAL_I0511" FT /old_locus_tag="TVS0340" FT /product="UDP-N-acetylglucosamine FT 1-carboxyvinyltransferase" FT /EC_number="2.5.1.7" FT /db_xref="GOA:B6EMB5" FT /db_xref="InterPro:IPR001986" FT /db_xref="InterPro:IPR005750" FT /db_xref="InterPro:IPR013792" FT /db_xref="UniProtKB/Swiss-Prot:B6EMB5" FT /protein_id="CAQ78196.1" FT /translation="MYKFRIQGSDKPLSGEVTISGAKNAALPILFAALLAEEPVEVANV FT PKLRDVDTTIELLQRLGAKVSRNGSVHIDASEVNNFCAPYDLVKTMRASIWALGPLVAR FT FGKGQVSLPGGCAIGARPVDLHIHGLEQLGATIKLEDGYVKAEVDGRLKGAHIVMDKVS FT VGATITVMCAATLAEGTTILENAAREPEIVDTAHFLNAIGAKVSGMGTDTITIEGVERL FT GGGYHEVVADRIETGTFLVAAAVSGGKVVCKNTKASLLESVLAKLEEAGAKVESGEDWI FT SLDMTGRELKAVNIRTAPHPAFPTDMQAQFTLLNMMAKGPGIITETIFENRFMHIPELQ FT RMGAHAEIEGNTAICGDTDGLSGAQVMATDLRASASLVIAGCIAKGETIVDRIYHIDRG FT YDKIEDKLTALGANIERVRSSEL" FT misc_feature 567047..568252 FT /gene="murA" FT /locus_tag="VSAL_I0511" FT /note="HMMPfam hit to PF00275, EPSP synthase FT (3-phosphoshikimate 1-car, score 4.6e-167" FT /inference="protein motif:HMMPfam:PF00275" FT CDS 568435..569160 FT /transl_table=11 FT /gene="plsC" FT /locus_tag="VSAL_I0512" FT /old_locus_tag="TVS0341" FT /product="1-acyl-sn-glycerol-3-phosphate acyltransferase" FT /EC_number="2.3.1.51" FT /db_xref="GOA:B6EMB6" FT /db_xref="InterPro:IPR002123" FT /db_xref="InterPro:IPR004552" FT /db_xref="UniProtKB/TrEMBL:B6EMB6" FT /protein_id="CAQ78197.1" FT /translation="MIALLRLIALAIFAVFTFVFGCGYCLLSPRNPKHVYTFGLWFARM FT SRVFGIKLEVRVPESVKNSGPSLYIANHQNSWDLFTVSGAIQPRTVTVGKKSIAWMPLF FT GQLYWITGNILIDRNNRSKAVGTISQVADNIKKRNVSVWMFPEGTRSRGRGLLPFKTGA FT FHAAIAADVPVTPIVCSNTEGVKLNRWNNGVVIVEILPPVSLDGYTKANVRELANECRE FT QMKVKLEELNKEVAERNQA" FT sig_peptide 568435..568497 FT /gene="plsC" FT /locus_tag="VSAL_I0512" FT misc_feature 568453..568521 FT /gene="plsC" FT /locus_tag="VSAL_I0512" FT misc_feature 568468..568500 FT /gene="plsC" FT /locus_tag="VSAL_I0512" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 568588..568974 FT /gene="plsC" FT /locus_tag="VSAL_I0512" FT /note="HMMPfam hit to PF01553, Acyltransferase, score FT 3.5e-47" FT /inference="protein motif:HMMPfam:PF01553" FT CDS join(569231..569539,571809..572042) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0513" FT /old_locus_tag="TVS0346" FT /product="isopentenyl-diphosphate delta-isomerase FT (pseudogene)" FT /EC_number="5.3.3.2" FT /note="Similar to Rhodobacter capsulatus FT Isopentenyl-diphosphate delta-isomerase idi UniProt:P26173 FT (176 aa) fasta scores: E()=1.1e-16, 35.758% id in 165 aa. FT CDS is disrupted by the insertion of an IS element after FT codon 103" FT /db_xref="PSEUDO:CAQ78198.1" FT /inference="similar to sequence:UniProt:P26173" FT misc_feature order(569315..569539,571809..572015) FT /locus_tag="VSAL_I0513" FT /note="HMMPfam hit to PF00293, NUDIX domain, score 6.8e-16" FT /inference="protein motif:HMMPfam:PF00293" FT repeat_region complement(569549..571809) FT /note="VSa2" FT repeat_region complement(569549..569572) FT /note="IR of VSa2" FT CDS complement(join(569565..570326,570328..570342, FT 570349..570372,570374..570391,570391..570420, FT 570420..571043)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0514" FT /old_locus_tag="TVSb0092" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=2.7e-115, 55.781% id in 493 aa. CDS FT contains several frameshifts and translational stop codons" FT /db_xref="PSEUDO:CAQ78199.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT CDS complement(571115..571462) FT /transl_table=11 FT /locus_tag="VSAL_I0515" FT /old_locus_tag="TVSb0093" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78200.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT misc_feature complement(571120..571310) FT /locus_tag="VSAL_II0220" FT /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score FT 5.1e-32" FT /inference="protein motif:HMMPfam:PF05717" FT misc_feature complement(571121..571447) FT /locus_tag="VSAL_I0515" FT /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score FT 5.1e-32" FT /inference="protein motif:HMMPfam:PF05717" FT CDS complement(571459..571728) FT /transl_table=11 FT /locus_tag="VSAL_I0516" FT /old_locus_tag="TVS0345" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EHB3" FT /protein_id="CAQ78201.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS" FT repeat_region complement(571786..571809) FT /note="IR of VSa2" FT CDS complement(572099..572488) FT /transl_table=11 FT /locus_tag="VSAL_I0517" FT /old_locus_tag="TVS0347" FT /product="Endoribonuclease L-PSP" FT /db_xref="InterPro:IPR006056" FT /db_xref="InterPro:IPR006175" FT /db_xref="InterPro:IPR013813" FT /db_xref="InterPro:IPR019897" FT /db_xref="UniProtKB/TrEMBL:B6EMC1" FT /protein_id="CAQ78202.1" FT /translation="MTKVLHTDNAPAAIGPYIQGVDLGSMVLTSGQIPVNPATGEVSDD FT IAEQARQSLENVKAVIESSGLTVSDIVKMTVFVKDLNDFGTVNEVYGNFFDEHNVANYP FT ARSCVEVARLPKDVGIEIEAIAVRK" FT misc_feature complement(572105..572470) FT /locus_tag="VSAL_I0517" FT /note="HMMPfam hit to PF01042, Endoribonuclease L-PSP,score FT 4.4e-63" FT /inference="protein motif:HMMPfam:PF01042" FT misc_feature complement(572123..572179) FT /locus_tag="VSAL_I0517" FT /note="PS01094 Uncharacterized protein family UPF0076 FT signature." FT /inference="protein motif:ProSite:PS01094" FT CDS complement(572628..573092) FT /transl_table=11 FT /gene="pyrI" FT /locus_tag="VSAL_I0518" FT /old_locus_tag="TVS0348" FT /product="aspartate carbamoyltransferase regulatory chain" FT /db_xref="GOA:B6EMC2" FT /db_xref="InterPro:IPR002801" FT /db_xref="InterPro:IPR020542" FT /db_xref="InterPro:IPR020545" FT /db_xref="UniProtKB/Swiss-Prot:B6EMC2" FT /protein_id="CAQ78203.1" FT /translation="MSNKTELRVEAIKNGTVIDHIPANIGVKVLKLFQMDKTAERVTIG FT LNLPSSALGSKDLLKIENTFVTPEQASKLALYAPHATVNQIENYEVVKKIPLILPKQIT FT GVFECPNSNCITHGEPVDSSFKVIAKKGNIHLKCKYCEKVYSQEVVTDLH" FT misc_feature complement(572637..572792) FT /gene="pyrI" FT /locus_tag="VSAL_I0518" FT /note="HMMPfam hit to PF02748, Aspartate FT carbamoyltransferase regulatory ch, score 3.4e-24" FT /inference="protein motif:HMMPfam:PF02748" FT misc_feature complement(572796..573089) FT /gene="pyrI" FT /locus_tag="VSAL_I0518" FT /note="HMMPfam hit to PF01948, Aspartate FT carbamoyltransferase regulatory ch, score 1e-50" FT /inference="protein motif:HMMPfam:PF01948" FT CDS complement(573106..574035) FT /transl_table=11 FT /gene="pyrB" FT /locus_tag="VSAL_I0519" FT /old_locus_tag="TVS0349" FT /product="aspartate carbamoyltransferase catalytic subunit" FT /EC_number="2.1.3.2" FT /db_xref="GOA:B6EMS5" FT /db_xref="InterPro:IPR002082" FT /db_xref="InterPro:IPR006130" FT /db_xref="InterPro:IPR006131" FT /db_xref="InterPro:IPR006132" FT /db_xref="UniProtKB/Swiss-Prot:B6EMS5" FT /protein_id="CAQ78204.1" FT /translation="MANSLYQKHIISIPELSREELELIVETAGNIKKEPQPDLLKNKVI FT ASCFFEASTRTRLSFETAIQRLGGSVIGFDSAGNTSLAQKGETLADSVQIIASYANAYV FT MRHPREGAARLASEFSNGTPVINAGDGANQHPTQTLLDLYTIYETQGRLDNLNIAFVGD FT LKYGRTVHSLTQALAKFNGVKFFFIAPEVLAMPDYICEELDELGIEYQLLNSMEEAIPE FT LDILYMTRVQKERFDESEYAHIKSAYILSAADLKPARENLKVLHPLPRIDEINIDVDKT FT PHAYYFQQAENGVYARQALLALVLNESL" FT misc_feature complement(573124..573579) FT /gene="pyrB" FT /locus_tag="VSAL_I0519" FT /note="HMMPfam hit to PF00185, Aspartate/ornithine FT carbamoyltransferase, As, score 3.3e-54" FT /inference="protein motif:HMMPfam:PF00185" FT misc_feature complement(573589..574014) FT /gene="pyrB" FT /locus_tag="VSAL_I0519" FT /note="HMMPfam hit to PF02729, Aspartate/ornithine FT carbamoyltransferase, ca, score 1.5e-60" FT /inference="protein motif:HMMPfam:PF02729" FT misc_feature complement(573868..573891) FT /gene="pyrB" FT /locus_tag="VSAL_I0519" FT /note="PS00097 Aspartate and ornithine FT carbamoyltransferases signature." FT /inference="protein motif:ProSite:PS00097" FT CDS complement(574311..575315) FT /transl_table=11 FT /gene="argI" FT /locus_tag="VSAL_I0520" FT /old_locus_tag="TVS0350" FT /product="ornithine carbamoyltransferase chain I" FT /EC_number="2.1.3.3" FT /db_xref="GOA:B6EMS6" FT /db_xref="InterPro:IPR002292" FT /db_xref="InterPro:IPR006130" FT /db_xref="InterPro:IPR006131" FT /db_xref="InterPro:IPR006132" FT /db_xref="InterPro:IPR024904" FT /db_xref="UniProtKB/TrEMBL:B6EMS6" FT /protein_id="CAQ78205.1" FT /translation="MAFNLRNRNFLKLLDFTPKEIQHLLDLSADLKKAKYAGYEQPRLS FT GKNIALIFEKSSTRTRCAFEVAAFDQGAKVTYLGPSGSQIGHKESIKDTARVLGRMYDG FT IEYRGFGQSIVEELGKYAGVPVWNGLTDEFHPTQILADFLTMQEYAEDKQLNQIKFAYL FT GDARNNMGNSLMVGAAKMGMEIRLVAPKQFWPEDTLVTQCQEIASQTGAKIILTEDVTT FT GVEGCDFLYTDVWVSMGEAPEAWDERVALMTPYQINMNVIKATNNPNVKFMHCLPAFHN FT DETALGKEIAEKYGMNGLEVTDEVFESDYSIVFDEAENRMHTIKAIMVATLGQ" FT misc_feature complement(574323..574853) FT /gene="argI" FT /locus_tag="VSAL_I0520" FT /note="HMMPfam hit to PF00185, Aspartate/ornithine FT carbamoyltransferase, As, score 1.5e-87" FT /inference="protein motif:HMMPfam:PF00185" FT misc_feature complement(574869..575294) FT /gene="argI" FT /locus_tag="VSAL_I0520" FT /note="HMMPfam hit to PF02729, Aspartate/ornithine FT carbamoyltransferase, ca, score 4.5e-80" FT /inference="protein motif:HMMPfam:PF02729" FT misc_feature complement(575136..575159) FT /gene="argI" FT /locus_tag="VSAL_I0520" FT /note="PS00097 Aspartate and ornithine FT carbamoyltransferases signature." FT /inference="protein motif:ProSite:PS00097" FT CDS complement(575411..576631) FT /transl_table=11 FT /gene="arcA" FT /locus_tag="VSAL_I0521" FT /old_locus_tag="TVS0351" FT /product="arginine deiminase" FT /EC_number="3.5.3.6" FT /db_xref="GOA:B6EMS7" FT /db_xref="InterPro:IPR003198" FT /db_xref="InterPro:IPR003876" FT /db_xref="UniProtKB/Swiss-Prot:B6EMS7" FT /protein_id="CAQ78206.1" FT /translation="MSKLFVGSEIGQLRRVILHRPERALSHLTPTNCHNLLFDDVLSVE FT KALHEHDQFVATLRQQDVEVLLLQDLLEETLAHPEAKQWLLRHQISHYRFGPTFANQIR FT AFLLEKNNKELASILLGGLAFIELPFKAPSMLQQLSDPFDFVIDPLPNHLFTRDTSCWI FT YGGVSINPMAKAARKRESNHLRAIYKWHPLFSNQSFPRYFGDENRHYDNATIEGGDVLI FT IGKGNVLVGISERTTPQGIENLAKQLFRTEQAKQVIAIKLPENRSCMHLDTVMTHMDHN FT VFSVYPRVIDKNMPCWSITPCGDQQLAIQEKPNFEHSLMQALELDSLNIITTGGDSYEA FT EREQWHDANNVLTIKPGVVVAYERNVYTNEKYDKAGITVLPIMGDELGRGRGGARCMSC FT PIERDGI" FT misc_feature complement(575423..576610) FT /gene="arcA" FT /locus_tag="VSAL_I0521" FT /note="HMMPfam hit to PF02274, Amidinotransferase, score FT 9.7e-174" FT /inference="protein motif:HMMPfam:PF02274" FT CDS 576784..577200 FT /transl_table=11 FT /locus_tag="VSAL_I0522" FT /old_locus_tag="TVS0352" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EMS8" FT /db_xref="InterPro:IPR009671" FT /db_xref="InterPro:IPR016716" FT /db_xref="UniProtKB/TrEMBL:B6EMS8" FT /protein_id="CAQ78207.1" FT /translation="MSQEDEYLSVEQFLEFQKIETREIIESLKADGSEPEALYAIEHHL FT MAEDFKALENAVVEAFKMGFEVLEAEELEDENGAKILCCDAVMDCALDADVIDSQVEKL FT VLIAEKFDIIYDGWGTYYEGEDAEYDVIEDGDDE" FT misc_feature 576829..577149 FT /locus_tag="VSAL_I0522" FT /note="HMMPfam hit to PF06877, Protein of unknown function FT (DUF1260), score 3.2e-46" FT /inference="protein motif:HMMPfam:PF06877" FT CDS 577288..578124 FT /transl_table=11 FT /locus_tag="VSAL_I0523" FT /old_locus_tag="TVS0353" FT /product="hypothetical protein" FT /db_xref="GOA:B6EMS9" FT /db_xref="InterPro:IPR006104" FT /db_xref="InterPro:IPR008979" FT /db_xref="UniProtKB/TrEMBL:B6EMS9" FT /protein_id="CAQ78208.1" FT /translation="MNSRILLNGEKALWQLSPLTDTSLPIKDIPIQQGVAFAYDVLSVE FT DANHQEWHLMRFFDVDETLLSYPAIELVMSGVSRYAEVRINGVAVFDCNELMTRYRKDI FT KEYLQLGGNRFEILFLEEDDEDWLLDDNEVSGVCEINQAYYRRFGAVQSIDIKDDIGVF FT GVCFFQPIPHLSLNHISIEQIWHHGCELKVDVRFHTYKPNLISASIKFDGMTLTLPVDV FT RSDHVSALFQVEAPKYWDDQMQNSDDLYVIDVILDGQHHELEIGLCRTENVIHFPL" FT CDS complement(578281..581142) FT /transl_table=11 FT /gene="valS" FT /locus_tag="VSAL_I0524" FT /old_locus_tag="TVS0354" FT /product="valyl-tRNA synthetase" FT /EC_number="6.1.1.9" FT /db_xref="GOA:B6EMT0" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002300" FT /db_xref="InterPro:IPR002303" FT /db_xref="InterPro:IPR009008" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR010978" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR019499" FT /db_xref="UniProtKB/TrEMBL:B6EMT0" FT /protein_id="CAQ78209.1" FT /translation="MEKTYNPQSIEQALYQTWEEKGYFKPHGDTSKEAYSIMIPPPNVT FT GSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHD FT YGRETFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGLSAATQEVFVRLFEE FT DLIYRGKRLVNWDPKLHTAISDLEVESKDKKGFMWHFRYPLANGVKTADGKDYIVVATT FT RPETMLGDTGVAVNPEDPRYKDLIGQHIELPIVGRLIPIVGDEHADMDKGTGCVKITPA FT HDFNDYEVGKRHSLPMINILTFNADIRETAEVFTTNGEESDVYSAELPAKYHGMERFAA FT RKAIVAEFDELGLLEEIKDHDLTVPYGDRGGVVIEPMLTDQWYVRTAPLAAPAVKAVED FT GQIKFVPKQYENMYFSWMRDVQDWCISRQLWWGHRIPAWYDNSGKVYVGRSEEEVREKN FT NLAPVVVLRQDDDVLDTWFSSALWTFGTQGWPENTDALKTFHPSEVLVSGFDIIFFWVA FT RMIMMTMHFVKDEEGNAQVPFKTVYMTGLIRDENGDKMSKSKGNVLDPIDMIDGIGLEE FT LVEKRCGNMMQPQLAKKIEKATRKTFEGGIEPYGTDALRFTLAAMASTGRDINWDMKRL FT EGYRNFCNKLWNASRYVLMNTEEHDCGMAEGAELEFSLADQWITSQFEVAAKEFNAHLD FT NYRLDMAANTLYEFIWNQFCDWYLELTKPVLWKGTEAQQRATRYTLITVLEKTLRLAHP FT ILPYITESIWQSVKPLVDGVEGETIMTQALPQFNEENFNADVVSDLEWVKAFITSIRNL FT RAEYDIAPSKGLDVMIKVADEKDAARIKANEIVLTSLAKLDSIKVLDDNEETPACATSL FT VGKSELMIPMAGLIDKDAELARLDKEVAKIQGEIKRIEGKLGNEGFVAKAPEVVIAKER FT EKLDGYNETLVKLEAQKETIAAL" FT misc_feature complement(578518..578541) FT /gene="valS" FT /locus_tag="VSAL_I0524" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(578656..579120) FT /gene="valS" FT /locus_tag="VSAL_I0524" FT /note="HMMPfam hit to PF08264, Anticodon-binding FT domain,score 1.9e-62" FT /inference="protein motif:HMMPfam:PF08264" FT misc_feature complement(579250..581106) FT /gene="valS" FT /locus_tag="VSAL_I0524" FT /note="HMMPfam hit to PF00133, tRNA synthetases class I (I, FT L, M and V), score 0" FT /inference="protein motif:HMMPfam:PF00133" FT misc_feature complement(580984..581019) FT /gene="valS" FT /locus_tag="VSAL_I0524" FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT /inference="protein motif:ProSite:PS00178" FT CDS complement(581253..581696) FT /transl_table=11 FT /gene="holC" FT /locus_tag="VSAL_I0525" FT /old_locus_tag="TVS0355" FT /product="DNA polymerase III, chi subunit" FT /EC_number="2.7.7.7" FT /db_xref="GOA:B6EMT1" FT /db_xref="InterPro:IPR007459" FT /db_xref="UniProtKB/TrEMBL:B6EMT1" FT /protein_id="CAQ78210.1" FT /translation="MSQALFYVLESTSPAATQPGLLKFVCQLAHYYYSQNARVYILSDD FT KEQALLIDELLWQNDVSEFIPHNLIGEGPKSGSPIEIGWGTLRPSGRRHVLINLAQEVA FT TFAVSFAQVVDFVPCEEKVKQHARERYKIYRNAGRAMQTETLK" FT misc_feature complement(581259..581696) FT /gene="holC" FT /locus_tag="VSAL_I0525" FT /note="HMMPfam hit to PF04364, DNA polymerase III chi FT subunit, HolC, score 1.5e-56" FT /inference="protein motif:HMMPfam:PF04364" FT CDS complement(581790..583298) FT /transl_table=11 FT /gene="pepA" FT /locus_tag="VSAL_I0526" FT /old_locus_tag="TVS0356" FT /product="cytosol aminopeptidase" FT /EC_number="3.4.11.1" FT /db_xref="GOA:B6EMT2" FT /db_xref="InterPro:IPR000819" FT /db_xref="InterPro:IPR008283" FT /db_xref="InterPro:IPR011356" FT /db_xref="InterPro:IPR023042" FT /db_xref="UniProtKB/Swiss-Prot:B6EMT2" FT /protein_id="CAQ78211.1" FT /translation="MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISS FT LLRRGDLEGKPGQMLLLHQVPNILSERVLLVGCGKERELGERQYKDIIKKTISTLNETG FT SMEAVCFLTELHVKGRDTYWKVRQAVESTKDSLYTFNQFKSNKPETRRPLRKLVFNVPT FT RRELSLGEKAINHGLSISSGVKASKDLGNMPPNVANPAYLASQARRLADDFETVTTKVI FT GEEEMKKLGMTSYLAVGQGSHNESMMSVMEYKGHPNPDAKPIVLIGKGLTFDSGGISLK FT PSDSMDEMKYDMCGAASVFGAMKALAKLNLPLNVVGILAGCENMPSSNSYRPGDILTTM FT SGQTVEVLNTDAEGRLVLCDALTYVERYEPDCVVDVATLTGACVVALGHHINGLLSNHN FT PLAHELINASEQSGDRAWRLPMSEEYNEQLNSPFADMANIGGKAGGTITAGCFLARFAK FT KYNWAHIDSAGTAWVSGANKGSTGRPVSLLVQFLLNRSGPESVE" FT misc_feature complement(581829..582749) FT /gene="pepA" FT /locus_tag="VSAL_I0526" FT /note="HMMPfam hit to PF00883, Cytosol aminopeptidase FT family, cataly, score 1.1e-186" FT /inference="protein motif:HMMPfam:PF00883" FT misc_feature complement(582231..582254) FT /gene="pepA" FT /locus_tag="VSAL_I0526" FT /note="PS00631 Cytosol aminopeptidase signature." FT /inference="protein motif:ProSite:PS00631" FT misc_feature complement(582858..583244) FT /gene="pepA" FT /locus_tag="VSAL_I0526" FT /note="HMMPfam hit to PF02789, Cytosol aminopeptidase FT family, N-term, score 3.3e-41" FT /inference="protein motif:HMMPfam:PF02789" FT CDS 583488..584600 FT /transl_table=11 FT /locus_tag="VSAL_I0527" FT /old_locus_tag="TVS0357" FT /product="putative permease" FT /note="Similar to Escherichia coli Inner membrane protein FT YjgP UniProt:P0AF98 (366 aa) fasta scores: FT E()=2.7e-54,43.443% id in 366 aa" FT /db_xref="GOA:B6EMT3" FT /db_xref="InterPro:IPR005495" FT /db_xref="UniProtKB/TrEMBL:B6EMT3" FT /inference="similar to sequence:UniProt:P0AF98" FT /protein_id="CAQ78212.1" FT /translation="MIIIRYLIKETLKSQLAIFFVLFLIFMSQKFIQILADASDGDIPG FT GLILSLVGYNMPAMGLLMLPLSIFIGILLTFGRLYAESEITVMNATGMGNSILIRAALY FT LALITGSIAAVNSLWLSPWSQEQSTKLMENVESDAGIELLQKGQFKPSPDGKAVVFIDD FT ISDKGGKHLVNIFLAQPVPNDSLRPSVLISEKGTVKQLDDGRQVLVLDNGTRYEGIPTR FT LDYLESNFESYEVLIGQKEVKEKRRDWDALPTLDLIKRTELEAKAELQWRISLILCIPL FT LTMVVVPLSAVNPRQGRFAKLAPAILLYLAYFLSLSAGKSAIEEGSLHPSVGLWAINAV FT LLIIGIILNSMDSVFVRKLKDKMRRKPKHV" FT sig_peptide 583488..583595 FT /locus_tag="VSAL_I0527" FT misc_feature 583500..584558 FT /locus_tag="VSAL_I0527" FT /note="HMMPfam hit to PF03739, Predicted permease YjgP/YjgQ FT family, score 2.9e-92" FT /inference="protein motif:HMMPfam:PF03739" FT misc_feature order(583533..583601,583659..583727,583788..583856, FT 584295..584363,584382..584444,584487..584555) FT /locus_tag="VSAL_I0527" FT CDS 584593..585669 FT /transl_table=11 FT /locus_tag="VSAL_I0528" FT /old_locus_tag="TVS0358" FT /product="putative permease" FT /note="Similar to Escherichia coli Inner membrane protein FT YjgQ UniProt:P0ADC6 (360 aa) fasta scores: FT E()=2.6e-66,51.685% id in 356 aa" FT /db_xref="GOA:B6EMT4" FT /db_xref="InterPro:IPR005495" FT /db_xref="UniProtKB/TrEMBL:B6EMT4" FT /inference="similar to sequence:UniProt:P0ADC6" FT /protein_id="CAQ78213.1" FT /translation="MFKILDWYIGRTIIATSSLCLVTLVGLSSIIKYVEQLRKVGKGTY FT DLLDALYFVILSMPRDIEMFFPMAALLGALIGLGMLAASSELVVMQAAGYSKLDIGISV FT LKTAIPLMLMVMALGQWGAPQAQKMARDLRAFSISGGNIASMRTGVWAKDGNDFIYLSR FT VDDQAKLYGVTLWQFDKERKLDDIVFAKKAEYESKEEGWKLIDVSITDMKDENIITEKK FT LDSLSWSTTLTPDKLAVVSVKPEEQSLTGLYDYVNYLKDSELDASRYELAFWRKALQPI FT SVAVMMLLALSFVFGPLRSVTMGARILSGVIAGFSFYISNEVFGPMTLVYNIHPIFGAL FT GPSFVFLLITLGLLNRKL" FT misc_feature 584611..585660 FT /locus_tag="VSAL_I0528" FT /note="HMMPfam hit to PF03739, Predicted permease YjgP/YjgQ FT family, score 2.2e-96" FT /inference="protein motif:HMMPfam:PF03739" FT misc_feature order(584611..584679,584791..584859,584896..584964, FT 585424..585492,585511..585579,585589..585657) FT /locus_tag="VSAL_I0528" FT CDS complement(585746..586222) FT /transl_table=11 FT /locus_tag="VSAL_I0529" FT /old_locus_tag="TVS0359" FT /product="membrane protein" FT /db_xref="InterPro:IPR010432" FT /db_xref="UniProtKB/TrEMBL:B6EMT5" FT /protein_id="CAQ78214.1" FT /translation="MEEKMKTQKQAGFMRRMGAWFYDTLIISAIMMLTGGIIVATLEML FT YGMGLISYGSYPDVSSYLNNDPMWSNLYPITLISVFVGFFAYFWCKGQTLGMRAWKLQV FT QQFDGSPITLTQAIIRMSTSAFGLGNFLVFISQDNSAFQDTWAKTQVIVLDKAV" FT misc_feature complement(585764..586195) FT /locus_tag="VSAL_I0529" FT /note="HMMPfam hit to PF06271, RDD family, score 4.3e-29" FT /inference="protein motif:HMMPfam:PF06271" FT misc_feature complement(order(585956..586024,586082..586150)) FT /locus_tag="VSAL_I0529" FT tRNA 586390..586471 FT /locus_tag="VSAL_I3117t" FT /product="transfer RNA-Leu" FT CDS complement(586622..586879) FT /transl_table=11 FT /locus_tag="VSAL_I0530" FT /old_locus_tag="TVS0360" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR021376" FT /db_xref="UniProtKB/TrEMBL:B6EMT6" FT /protein_id="CAQ78215.1" FT /translation="MNPIIQTLKEHNVSDEKITEVFQALTQNPLAAMATIQSLGIPQEK FT LQPLMMMVMTNPSLIKEAVEELGLDFSKVEEAKAKLEENK" FT CDS complement(586955..587341) FT /transl_table=11 FT /gene="dgkA" FT /locus_tag="VSAL_I0531" FT /old_locus_tag="TVS0361" FT /product="diacylglycerol kinase" FT /EC_number="2.7.1.107" FT /db_xref="GOA:B6EMT7" FT /db_xref="InterPro:IPR000829" FT /db_xref="UniProtKB/TrEMBL:B6EMT7" FT /protein_id="CAQ78216.1" FT /translation="MTDTPSGKPANTGIKRVIKATQFSMQGLKAAFKHEAAVRQEFAML FT VITAPIALLLDVTIVEKILLIGVFVLIFIVELLNSAIEAVVDRIGPEHHELSGRAKDIG FT SSAVFVALCLAGFTWLMILGSHYL" FT misc_feature complement(586967..587302) FT /gene="dgkA" FT /locus_tag="VSAL_I0531" FT /note="HMMPfam hit to PF01219, Prokaryotic diacylglycerol FT kinase, score 1.3e-44" FT /inference="protein motif:HMMPfam:PF01219" FT misc_feature complement(order(586967..587035,587096..587155, FT 587165..587218)) FT /gene="dgkA" FT /locus_tag="VSAL_I0531" FT misc_feature complement(587081..587116) FT /gene="dgkA" FT /locus_tag="VSAL_I0531" FT /note="PS01069 Prokaryotic diacylglycerol kinase FT signature." FT /inference="protein motif:ProSite:PS01069" FT tRNA complement(587496..587568) FT /locus_tag="VSAL_I3118t" FT /product="transfer RNA-Asn" FT tRNA complement(587579..587651) FT /locus_tag="VSAL_I3119t" FT /product="transfer RNA-Phe" FT tRNA complement(587662..587734) FT /locus_tag="VSAL_I3120t" FT /product="transfer RNA-Thr" FT tRNA complement(587814..587886) FT /locus_tag="VSAL_I3121t" FT /product="transfer RNA-Asn" FT tRNA complement(587896..587968) FT /locus_tag="VSAL_I3122t" FT /product="transfer RNA-Phe" FT tRNA complement(587979..588051) FT /locus_tag="VSAL_I3123t" FT /product="transfer RNA-Thr" FT tRNA complement(588131..588203) FT /locus_tag="VSAL_I3124t" FT /product="transfer RNA-Phe" FT CDS complement(588313..589449) FT /transl_table=11 FT /gene="mltC" FT /locus_tag="VSAL_I0532" FT /old_locus_tag="TVS0362" FT /product="membrane-bound lytic murein transglycosylase C FT precursor" FT /EC_number="3.2.1.-" FT /db_xref="GOA:B6EMT8" FT /db_xref="InterPro:IPR000189" FT /db_xref="InterPro:IPR008258" FT /db_xref="InterPro:IPR023346" FT /db_xref="InterPro:IPR024570" FT /db_xref="UniProtKB/TrEMBL:B6EMT8" FT /protein_id="CAQ78217.1" FT /translation="MKKIILIVSTCLFLTSCSRESIESTFGINYDTTNRFAKNLAPLPG FT QFTKDLKALDSLISSFNGNIEKRWGKKNLITAGKRSYVKYTDGYLSRSQVDFTSGRVTV FT ETVAGTEPKAHLRQAIITTLLTPDDPAGVDLYSDADVTLGGKPFLYQQVLDQDKKPIEW FT SWRASRYADYLIAHHLKQKNIDYKKAYYVDIPMVKNHEQLREYQYADIVRKASQRYDIP FT EDLIYSIIRTESSFNPYAVSWANAYGLMQVVPKTAGRDVFKLVKKKSGDPTPEYLFNPH FT NNIDTGAAYFHILKTRYLKDIRNPISKQYSMISAYNGGAGGVFTTFSSSRSRAINDINS FT LNPNQVYWALTKKHKNAEARRYLEKVTAYKKEFNSGKI" FT misc_feature complement(588433..588822) FT /gene="mltC" FT /locus_tag="VSAL_I0532" FT /note="HMMPfam hit to PF01464, Transglycosylase SLT domain, FT score 4.5e-36" FT /inference="protein motif:HMMPfam:PF01464" FT misc_feature complement(588679..588765) FT /gene="mltC" FT /locus_tag="VSAL_I0532" FT /note="PS00922 Prokaryotic transglycosylases signature." FT /inference="protein motif:ProSite:PS00922" FT sig_peptide complement(589387..589449) FT /gene="mltC" FT /locus_tag="VSAL_I0532" FT misc_feature complement(589399..589431) FT /gene="mltC" FT /locus_tag="VSAL_I0532" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(589560..589832) FT /transl_table=11 FT /gene="yggX" FT /locus_tag="VSAL_I0533" FT /old_locus_tag="TVS0363" FT /product="probable Fe(2+) trafficking protein" FT /db_xref="GOA:B6EMT9" FT /db_xref="InterPro:IPR007457" FT /db_xref="UniProtKB/Swiss-Prot:B6EMT9" FT /protein_id="CAQ78218.1" FT /translation="MSRTVFCVLLNKEADGLDFQLYPGELGKRIFDNISKEAWGQWQHK FT QTMLINEKKLNMMDPEHRKMLETEMEGFLFDGKDVVIDGYTPPSK" FT misc_feature complement(589569..589832) FT /gene="yggX" FT /locus_tag="VSAL_I0533" FT /note="HMMPfam hit to PF04362, Bacterial Fe(2+) FT trafficking, score 4.8e-61" FT /inference="protein motif:HMMPfam:PF04362" FT CDS complement(589835..590887) FT /transl_table=11 FT /gene="mutY" FT /locus_tag="VSAL_I0534" FT /old_locus_tag="TVS0364" FT /product="A/G-specific adenine glycosylase" FT /EC_number="3.2.2.-" FT /db_xref="GOA:B6EMU0" FT /db_xref="InterPro:IPR000086" FT /db_xref="InterPro:IPR000445" FT /db_xref="InterPro:IPR003265" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR003651" FT /db_xref="InterPro:IPR004035" FT /db_xref="InterPro:IPR004036" FT /db_xref="InterPro:IPR005760" FT /db_xref="InterPro:IPR011257" FT /db_xref="InterPro:IPR015797" FT /db_xref="InterPro:IPR023170" FT /db_xref="UniProtKB/TrEMBL:B6EMU0" FT /protein_id="CAQ78219.1" FT /translation="MTSFSHAILEWYDNYGRKTLPWQLEKTPYKVWLSEIMLQQTQVTT FT VIPYFERFMTRFPTVIDLANADQDEVLHLWTGLGYYARARNLHKTAQIIAEQYNGRFPE FT TIDEVIALPGIGRSTAGAVLSLSLKQRHPILDGNVKRTLSRCFAIEGWSGKKSVENAMW FT EIAEEHTPELGVERYNQAMMDMGAIVCTRSKPKCEICPVNDLCQAKAQDRQLDFPTKKP FT KKEKPMKEAWFAIYYHDGEVWLEQRPQTGIWGGLFCFPEQPENTLVDLSVRYGVEIKST FT QQLIAFRHTFSHYHLDITPVLITLVKKPNMVMEGTRGVWYNLSQPMTVGLAAPVQKLLD FT ALPYEISNGE" FT misc_feature complement(590270..590320) FT /gene="mutY" FT /locus_tag="VSAL_I0534" FT /note="PS00764 Endonuclease III iron-sulfur binding region FT signature." FT /inference="protein motif:ProSite:PS00764" FT misc_feature complement(590384..590791) FT /gene="mutY" FT /locus_tag="VSAL_I0534" FT /note="HMMPfam hit to PF00730, HhH-GPD superfamily base FT excision DNA repair, score 4.1e-19" FT /inference="protein motif:HMMPfam:PF00730" FT misc_feature complement(590510..590599) FT /gene="mutY" FT /locus_tag="VSAL_I0534" FT /note="HMMPfam hit to PF00633, Helix-hairpin-helix FT motif,score 0.0001" FT /inference="protein motif:HMMPfam:PF00633" FT CDS 591105..591821 FT /transl_table=11 FT /gene="trmB" FT /locus_tag="VSAL_I0535" FT /old_locus_tag="TVS0366" FT /product="tRNA (guanine-n(7)-)-methyltransferase" FT /EC_number="2.1.1.33" FT /db_xref="GOA:B6EMU1" FT /db_xref="InterPro:IPR003358" FT /db_xref="UniProtKB/Swiss-Prot:B6EMU1" FT /protein_id="CAQ78220.1" FT /translation="MTEVTKNDFTEEGKIVRKIRSFVRREGRLTKGQEGAITECWSTMG FT IDFVEQVLDWNEVFGNNNPVVLEIGFGMGASLVEMAQKAPDVNFLGIEVHRPGVGACLA FT AAKEAGVTNLRVMCHDAVEVFESMIPDSSVTTLQLFFPDPWHKARHHKRRIVKAEFAEM FT IRPKLNAEGVFHMATDWENYAEHMIEVMNAAPGYENIATDGDYIPRPDERPLTKFEARG FT HRLGHGVWDIKFRRNA" FT misc_feature 591225..591815 FT /gene="trmB" FT /locus_tag="VSAL_I0535" FT /note="HMMPfam hit to PF02390, Putative FT methyltransferase,score 3.6e-88" FT /inference="protein motif:HMMPfam:PF02390" FT CDS 591928..592848 FT /transl_table=11 FT /gene="glsA" FT /locus_tag="VSAL_I0536" FT /old_locus_tag="TVS0367" FT /product="thermolabile glutaminase" FT /EC_number="3.5.1.2" FT /db_xref="GOA:B6EMU2" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR015868" FT /db_xref="UniProtKB/Swiss-Prot:B6EMU2" FT /protein_id="CAQ78221.1" FT /translation="MKPTKQILEDILNEVRPLIGQGEVADYIPALACVPSNKLGIAVYT FT NDGEMITAGDANERFSIQSISKALSLTLAMELYQPEELWHRVGKEPSGQAFNSLIQLEM FT EQGVPRNPFINAGAIVVADMLFSRFSAPKHRLLEFVRKLSGNEHIIYDRVVANSEMDHS FT DRNASIAYLMRSFGNFENEVMPVLKNYFHACSLNMSCVDLAKTFGYLANKGIQPETNEF FT IITPMQSKQINALMATCGLYDGAGEFAYRVGMPGKSGVGGGIIAIVPGEMTIAVWSPEL FT DPSGNSLAGTQALELLSERIGRSIF" FT misc_feature 591991..592845 FT /gene="glsA" FT /locus_tag="VSAL_I0536" FT /note="HMMPfam hit to PF04960, Glutaminase, score 3.1e-182" FT /inference="protein motif:HMMPfam:PF04960" FT CDS complement(592953..594113) FT /transl_table=11 FT /gene="yggW" FT /locus_tag="VSAL_I0537" FT /old_locus_tag="TVS0368" FT /product="oxygen-independent coproporphyrinogen III FT oxidase-like protein" FT /EC_number="1.3.99.-" FT /db_xref="GOA:B6EMU3" FT /db_xref="InterPro:IPR004559" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR010723" FT /db_xref="InterPro:IPR023404" FT /db_xref="UniProtKB/TrEMBL:B6EMU3" FT /protein_id="CAQ78222.1" FT /translation="MLVPPPLSLYIHIPWCIQKCPYCDFNSHALKTTIPEAQYISALID FT DLDTDLARYNMQNEPRKLHSIFIGGGTPSLITAPEIKRLLIEVEKRLPFADDIEITMEA FT NPGTVEAGRFIEYREAGVNRISIGVQSFQQEKLEKLGRIHGKDEALRAARLAHEAGLNS FT FNLDLMHGLPNQSIDDALSDLKQAIELNPPHLSWYQLTIEPNTVFYYKPPTLPDDDDLW FT DIFEQGHQILADAGYVQYEISGYSKVGYQCRHNLNYWRFGDYLGIGCGAHGKLSFADGR FT IIRTTKIKHPRGFLDLMKPYLIDEQEVADHDRSFEFFMNRFRLLEACPKQDFIDKTGLG FT LESIQETMDWAKEKKYLEETETHWQITEHGKLFLNDLLEAFVSDEE" FT misc_feature complement(592998..593348) FT /gene="yggW" FT /locus_tag="VSAL_I0537" FT /note="HMMPfam hit to PF06969, HemN C-terminal region,score FT 3.3e-22" FT /inference="protein motif:HMMPfam:PF06969" FT misc_feature complement(593553..594086) FT /gene="yggW" FT /locus_tag="VSAL_I0537" FT /note="HMMPfam hit to PF04055, Radical SAM FT superfamily,score 6e-28" FT /inference="protein motif:HMMPfam:PF04055" FT CDS complement(594117..594713) FT /transl_table=11 FT /locus_tag="VSAL_I0538" FT /old_locus_tag="TVS0369" FT /product="putative hydrolase" FT /db_xref="GOA:B6EMU4" FT /db_xref="InterPro:IPR002637" FT /db_xref="InterPro:IPR020922" FT /db_xref="UniProtKB/TrEMBL:B6EMU4" FT /protein_id="CAQ78223.1" FT /translation="MSKIVLATGNQGKVREMADVLSDFGFDVVAQSEFNVSDVAETGTT FT FIENAIIKARHAAKESGLPAIADDSGLEVDALHGAPGVYSARYSGEGATDQKNIDKMLA FT AMKDIPEEKRTARFHCVLVLMKHENDPTPLICHGSWEGHITTEQQGENGFGYDPIFWVS FT EDNCSSAELEPARKKQLSHRGQALKKLFAALKEGQ" FT misc_feature complement(594132..594704) FT /locus_tag="VSAL_I0538" FT /note="HMMPfam hit to PF01725, Ham1 family, score 1.5e-97" FT /inference="protein motif:HMMPfam:PF01725" FT CDS complement(594724..595155) FT /transl_table=11 FT /locus_tag="VSAL_I0539" FT /old_locus_tag="TVS0370" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:B6EMU5" FT /protein_id="CAQ78224.1" FT /translation="MKKTLLLLSLFLFSLPSFAGQFVQIKNVEVHYSAFNSTFLTPKVA FT RAYQLKRSGYTALINISVLDISQAGKPAISAQVSGTAKNLLGQTKTLTFREIKEKNAIY FT YIAELPITNEETFRFDIDVSSGKKGAGKLKFNQKFYVEE" FT sig_peptide complement(595099..595155) FT /locus_tag="VSAL_I0539" FT CDS complement(595227..595478) FT /transl_table=11 FT /locus_tag="VSAL_I0540" FT /old_locus_tag="TVS0371" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003746" FT /db_xref="InterPro:IPR005228" FT /db_xref="UniProtKB/TrEMBL:B6EMU6" FT /protein_id="CAQ78225.1" FT /translation="MPIKYDNDDLVLRLYLQPKASRDQIVGIHGEELKVAITAPPVDGK FT ANAHLIKYFSKLFKVAKGKITVEKGELNRHKQGSNSLS" FT misc_feature complement(595239..595463) FT /locus_tag="VSAL_I0540" FT /note="HMMPfam hit to PF02594, Uncharacterised ACR, YggU FT family COG1872, score 2.9e-34" FT /inference="protein motif:HMMPfam:PF02594" FT CDS complement(595507..596061) FT /transl_table=11 FT /locus_tag="VSAL_I0541" FT /old_locus_tag="TVS0372" FT /product="membrane protein, related to K+ transport" FT /db_xref="GOA:B6EMU7" FT /db_xref="InterPro:IPR003425" FT /db_xref="UniProtKB/TrEMBL:B6EMU7" FT /protein_id="CAQ78226.1" FT /translation="MNAMSFLISTVFDLYIMVVILRIWLQVARADFYNPFSQFIIKATQ FT PVVSPLRRIIPSIGSLDLATVLFAYVLCVVKFVALQVVVSGGITFGPEFLIIGLIALAK FT AAGGLLFWILLVRAILSWVSQGRSPIEYVMNQLTEPMLAPIRKILPQMGGLDLSVLVLF FT IVLQFANFLMGDLLGPIWYSL" FT misc_feature complement(order(595519..595587,595714..595782, FT 595801..595869,595981..596049)) FT /locus_tag="VSAL_I0541" FT misc_feature complement(595534..595776) FT /locus_tag="VSAL_I0541" FT /note="HMMPfam hit to PF02325, YGGT family, score 1.1e-28" FT /inference="protein motif:HMMPfam:PF02325" FT misc_feature complement(595816..596061) FT /locus_tag="VSAL_I0541" FT /note="HMMPfam hit to PF02325, YGGT family, score 4.5e-23" FT /inference="protein motif:HMMPfam:PF02325" FT CDS complement(596137..596955) FT /transl_table=11 FT /gene="proC" FT /locus_tag="VSAL_I0542" FT /old_locus_tag="TVS0373" FT /product="pyrroline-5-carboxylate reductase" FT /EC_number="1.5.1.2" FT /db_xref="GOA:B6EMU8" FT /db_xref="InterPro:IPR000304" FT /db_xref="InterPro:IPR004455" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EMU8" FT /protein_id="CAQ78227.1" FT /translation="MEHRNIAFIGAGNMTRSIIAGLISSGYPKKNITATNPSTDKLNNL FT EQCYGINISTDNLAAAQQADVIVLAVKPQMMETAAKPLQSVDYSDKLVISIAAGISAKR FT LNEMFAAELNLVRVMPNTPALVGKGMSGLFAVEHISEQDKHFASDLLSAVGEVCWVEKE FT SGINSVIAAAGSAPAYFFLFMEAMQAEAIKQGFSEDTARLLVQQSALGAAEMVIANPET FT PLSTLREQVTSKGGTTAEALRTFNEHHLQEIVAKAMQAAVARAEEMETLF" FT misc_feature complement(596197..596943) FT /gene="proC" FT /locus_tag="VSAL_I0542" FT /note="HMMPfam hit to PF03807, NADP oxidoreductase coenzyme FT F420-depe, score 2.4e-77" FT /inference="protein motif:HMMPfam:PF03807" FT misc_feature complement(596218..596289) FT /gene="proC" FT /locus_tag="VSAL_I0542" FT /note="PS00521 Delta 1-pyrroline-5-carboxylate reductase FT signature." FT /inference="protein motif:ProSite:PS00521" FT misc_feature complement(596545..596946) FT /gene="proC" FT /locus_tag="VSAL_I0542" FT /note="HMMPfam hit to PF01210, NAD-dependent FT glycerol-3-phosphate deh, score 0.00084" FT /inference="protein motif:HMMPfam:PF01210" FT CDS complement(596942..597709) FT /transl_table=11 FT /locus_tag="VSAL_I0543" FT /old_locus_tag="TVS0374" FT /product="membrane protein, related to K+ transport" FT /db_xref="InterPro:IPR001608" FT /db_xref="InterPro:IPR011078" FT /db_xref="UniProtKB/TrEMBL:B6EMU9" FT /protein_id="CAQ78228.1" FT /translation="MTSIKQNIHQITLQIENSIQKCGRSPDSVQLLAVSKTKPIELLEQ FT AIESGQHSFGENYVQEGVDKVHYFQKNHSNIELEWHFIGPIQSNKTRPIAEHFDWVHSI FT DRLKIAQRLNEQRPSDLGELNVLIQVNISSEDSKSGTTANEVMSLAAAIHAMPNLTLRG FT LMSIPANVSNYEEQLAAFKQLASIQNQLEAQYPQVDTLSMGMSGDIDAAIEAGSTMVRI FT GTAIFGARNYTNEVIIHSKRLLKIKNRNTNGTS" FT misc_feature complement(597014..597703) FT /locus_tag="VSAL_I0543" FT /note="HMMPfam hit to PF01168, Alanine racemase,N-terminal FT domain, score 1.3e-36" FT /inference="protein motif:HMMPfam:PF01168" FT misc_feature complement(597428..597472) FT /locus_tag="VSAL_I0543" FT /note="PS01211 Uncharacterized protein family UPF0001 FT signature." FT /inference="protein motif:ProSite:PS01211" FT CDS 597733..598770 FT /transl_table=11 FT /gene="pilT" FT /locus_tag="VSAL_I0544" FT /old_locus_tag="TVS0375" FT /product="twitching mobility protein PilT, type II/IV FT secretion system protein" FT /db_xref="GOA:B6EMV0" FT /db_xref="InterPro:IPR001482" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR006321" FT /db_xref="UniProtKB/TrEMBL:B6EMV0" FT /protein_id="CAQ78229.1" FT /translation="MDITELLDFSVKQNASDLHLSAGVPPMVRVDGEVRKLTLPDFTHA FT DVHRLVTDFMNDAQRSEFEEKLEVDFSFELPSVGRFRVNAFNQSRGCAAVFRTIPVEVP FT SLDQLDVPDIFLDIAKYQKGLVLITGPTGSGKSTTLAAMVDYVNEHHNKHILTIEDPIE FT FVHKNKKCLINQREVHRDTHSFKAALRSALREDPDVILVGELRDQETISLALTAAETGH FT LVFATLHTSSAAKTIDRIIDVFPGSDKSMVRSMLSESLRAVVAQTLLKRIGGGRIACHE FT IMIATPAIRNLIREDKVAQMYSIIQTGSAFGMQTMEQNAKKIIAQGLVDPDEVAKKVEI FT TSMGF" FT misc_feature 597736..598548 FT /gene="pilT" FT /locus_tag="VSAL_I0544" FT /note="HMMPfam hit to PF00437, Type II/IV secretion system FT protein, score 1.6e-26" FT /inference="protein motif:HMMPfam:PF00437" FT misc_feature 598120..598143 FT /gene="pilT" FT /locus_tag="VSAL_I0544" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 598309..598353 FT /gene="pilT" FT /locus_tag="VSAL_I0544" FT /note="PS00662 Bacterial type II secretion system protein E FT signature." FT /inference="protein motif:ProSite:PS00662" FT CDS 598773..599879 FT /transl_table=11 FT /gene="pilU" FT /locus_tag="VSAL_I0545" FT /old_locus_tag="TVS0376" FT /product="twitching motility protein PilU, type II/IV FT secretion system protein" FT /db_xref="GOA:B6EMV1" FT /db_xref="InterPro:IPR001482" FT /db_xref="InterPro:IPR006321" FT /db_xref="UniProtKB/TrEMBL:B6EMV1" FT /protein_id="CAQ78230.1" FT /translation="MNLDDLLNQMVKQKASDIYITVDAPCLLRVDGVLQATGAKQTVES FT VTALLAEMMNDDREKEFTQTLEANFAIVKESGRFRVSAFWQREQPGAVIRRIETKIPSM FT DSLYLPSIMKDLAVAKRGLVLVVGATGSGKSTTMAAMTGYRNDHKSGHILTVEDPIEFV FT HPHNKCIVTQREVGLDTDSYEVALKNSLRQAPDMILIGEIRTRETMKYAMMFAETGHLC FT MATLHANNANQALERILHLVPKENKEQFLFDLSMNLKGVIAQQLVPDAQGNGRHGVFEV FT LLNTPRIADLIRRGDLHELKGTMTRSRESGMQTFDQCLFDLVIDGKITETEALHSADSA FT NDLRLMLKTKRGDSFTTSKFDNVSISLD" FT misc_feature 598773..599582 FT /gene="pilU" FT /locus_tag="VSAL_I0545" FT /note="HMMPfam hit to PF00437, Type II/IV secretion system FT protein, score 6.8e-17" FT /inference="protein motif:HMMPfam:PF00437" FT misc_feature 599154..599177 FT /gene="pilU" FT /locus_tag="VSAL_I0545" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(599983..600408) FT /transl_table=11 FT /gene="yqgF" FT /locus_tag="VSAL_I0546" FT /old_locus_tag="TVS0377" FT /product="conserved hypothetical protein" FT /EC_number="3.1.-.-" FT /note="Similar to Escherichia coli yqgf putative holliday FT junction resolvase (ec 3.1.-.-). UniProt:P0A8I1 FT (EMBL:EC28377) (138 aa) fasta scores: E()=8.2e-32, 68.148% FT id in 135 aa" FT /db_xref="GOA:B6EMV2" FT /db_xref="InterPro:IPR005227" FT /db_xref="InterPro:IPR006641" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/Swiss-Prot:B6EMV2" FT /inference="similar to sequence:UniProt:P0A8I1" FT /protein_id="CAQ78231.1" FT /translation="MSSRTIMAFDFGTKSIGSAIGQEITGTASPLKAFKAQDGTPNWDD FT IEKQIKEWQPDLIVVGLPTDLHGKELDVITPKAKKFANRLHGRFGNQVELHDERLSTVE FT ARADLFEFGGYKALSKGNVDCQSAVVILESWFESQWG" FT misc_feature complement(599995..600399) FT /gene="yqgF" FT /locus_tag="VSAL_I0546" FT /note="HMMPfam hit to PF03652, Uncharacterised protein FT family (UPF0081), score 3.5e-53" FT /inference="protein motif:HMMPfam:PF03652" FT CDS complement(600405..600968) FT /transl_table=11 FT /locus_tag="VSAL_I0547" FT /old_locus_tag="TVS0378" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003774" FT /db_xref="UniProtKB/Swiss-Prot:B6EMV3" FT /protein_id="CAQ78232.1" FT /translation="MDLKNHFLVAMPSMNDPVFTRSVIYICEHDSDGTMGLRINQPVQI FT SLKGMLDQIKLDNPSPIIFPQTLSQPVLNGGPVSDDRGFVLHYPKDNYSSSIEVTEELS FT VTTSKDILATLGTEDQPYKYLVALGYSGWDAGQLEQELSENTWLILEADSSVIFDTPIP FT DRWRRAIEILGISPVNISSEVGHA" FT misc_feature complement(600408..600968) FT /locus_tag="VSAL_I0547" FT /note="HMMPfam hit to PF02622, Uncharacterized ACR,COG1678, FT score 3e-89" FT /inference="protein motif:HMMPfam:PF02622" FT CDS complement(601042..602028) FT /transl_table=11 FT /gene="gshB" FT /locus_tag="VSAL_I0548" FT /old_locus_tag="TVS0379" FT /product="glutathione synthetase" FT /EC_number="6.3.2.3" FT /db_xref="GOA:B6EMV4" FT /db_xref="InterPro:IPR004215" FT /db_xref="InterPro:IPR004218" FT /db_xref="InterPro:IPR006284" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="UniProtKB/TrEMBL:B6EMV4" FT /protein_id="CAQ78233.1" FT /translation="MAILANWRNTMIKLGIVMDPISSINIKKDSSFAMMLEAQKRGWEI FT HYMEMADLHLDQGKAVADTKVVELKEDPTGWYEFKSEQTIDLAELDAVLMRKDPPFDTE FT YIYATYILERAEIQGALIVNKPQSLRDCNEKLFTAWFPELTPTTLVTRKSDKIKAFREK FT HGDIILKPLDGMGGASIFRVKAGDPNVSVIIETLTNHEQNYCMAQTFVPDISNGDKRIL FT VVDGEPMPYCLARIPAKGETRGNLAAGGTGEARPLSETDWAIANAVAPTLKEKGLIFVG FT LDVIGDKLTEINVTSPTCIKEIEAAFDISITGKLMDAIERRINEKSA" FT misc_feature complement(601072..601641) FT /gene="gshB" FT /locus_tag="VSAL_I0548" FT /note="HMMPfam hit to PF08443, RimK-like ATP-grasp FT domain,score 2.6e-05" FT /inference="protein motif:HMMPfam:PF08443" FT misc_feature complement(601099..601629) FT /gene="gshB" FT /locus_tag="VSAL_I0548" FT /note="HMMPfam hit to PF02955, Prokaryotic glutathione FT synthetase, ATP-gra, score 2.1e-129" FT /inference="protein motif:HMMPfam:PF02955" FT misc_feature complement(601639..601995) FT /gene="gshB" FT /locus_tag="VSAL_I0548" FT /note="HMMPfam hit to PF02951, Prokaryotic glutathione FT synthetase, N-termi, score 5.7e-61" FT /inference="protein motif:HMMPfam:PF02951" FT CDS complement(602012..602743) FT /transl_table=11 FT /locus_tag="VSAL_I0549" FT /old_locus_tag="TVS0380" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EMV5" FT /db_xref="InterPro:IPR006700" FT /db_xref="InterPro:IPR015947" FT /db_xref="UniProtKB/TrEMBL:B6EMV5" FT /protein_id="CAQ78234.1" FT /translation="MRIPRIHHPELLPSQGKVNLSDDAANHVGRVMRMKEGEAVLLFDG FT SGAEFPAVITSSSKKSVEVEISERIDHSSESPLNLHLGQVVSRGDKMEFTIQKSVELGV FT NIITPLISERCGVKLNKERFEKKLDQWHKIAIAACEQCGRNTIPEIRPIMSLEEWCAEE FT YEGLKLNLHPRAKYSINTLPEPVTNVRLLIGPEGGLSSEEITMTEQYQFEETLLGPRVL FT RTETAALTAITALQVRFGDLG" FT misc_feature complement(602033..602692) FT /locus_tag="VSAL_I0549" FT /note="HMMPfam hit to PF04452, Protein of unknown function FT (DUF558), score 4.1e-105" FT /inference="protein motif:HMMPfam:PF04452" FT CDS complement(602822..603535) FT /transl_table=11 FT /locus_tag="VSAL_I0550" FT /old_locus_tag="TVS0381" FT /product="endonuclease I precursor" FT /db_xref="GOA:B6EMV6" FT /db_xref="InterPro:IPR007346" FT /db_xref="UniProtKB/TrEMBL:B6EMV6" FT /protein_id="CAQ78235.1" FT /translation="MYFMKLIRLVISLIAVSFTVNVMAAPPSSFSKAKKEAVKIYLDYP FT TSFYCGCDITWKNKKKGIPELESCGYQVRKQEKRASRIEWEHVVPAWQFGHQRQCWQKG FT GRKNCTRNDKQFKSMEADLHNLVPAIGEVNGDRSNFRFSQWNGSKGAFYGQCAFKVDFK FT GRVAEPPAQSRGAIARTYLYMNNEYKFNLSKAQRQLMEAWNKQYPVSTWECTRDERIAK FT IQGNHNQFVYKACTK" FT misc_feature complement(602831..603454) FT /locus_tag="VSAL_I0550" FT /note="HMMPfam hit to PF04231, Endonuclease I, score FT 5.7e-127" FT /inference="protein motif:HMMPfam:PF04231" FT sig_peptide complement(603464..603535) FT /locus_tag="VSAL_I0550" FT CDS complement(603626..604111) FT /transl_table=11 FT /locus_tag="VSAL_I0551" FT /old_locus_tag="TVS0382" FT /product="putative metallopeptidase, SprT family" FT /function="Sprt is involved in bola gene expression at the FT stationary phase in E.coli" FT /note="Similar to Escherichia coli Protein SprT FT UniProt:P39902 (165 aa) fasta scores: E()=5.2e-31, 51.634% FT id in 153 aa" FT /db_xref="GOA:B6EMV7" FT /db_xref="InterPro:IPR006640" FT /db_xref="InterPro:IPR023483" FT /db_xref="UniProtKB/TrEMBL:B6EMV7" FT /inference="similar to sequence:UniProt:P39902" FT /protein_id="CAQ78236.1" FT /translation="MTPLQQASVAKAQQCIQQASTFFNRPFSLPAINFTQRGKIAGTAR FT LQGWEVRINPVLLEENQHTFINEVIPHEIAHLITFKLYGRVRPHGKEWQGIMNQVFNLP FT ARTTHSFSVESVKGKTFPYRCKCTTHELTVRRHNRVQRKETQYLCRQCQSPLNVVKK" FT misc_feature complement(603635..604084) FT /locus_tag="VSAL_I0551" FT /note="HMMPfam hit to PF03926, Putative metallopeptidase FT (SprT family), score 3.3e-70" FT /inference="protein motif:HMMPfam:PF03926" FT misc_feature complement(603878..603907) FT /locus_tag="VSAL_I0551" FT /note="PS00142 Neutral zinc metallopeptidases,zinc-binding FT region signature." FT /inference="protein motif:ProSite:PS00142" FT CDS complement(604227..605381) FT /transl_table=11 FT /gene="metK" FT /locus_tag="VSAL_I0552" FT /old_locus_tag="TVS0383" FT /product="S-adenosylmethionine synthetase" FT /EC_number="2.5.1.6" FT /db_xref="GOA:B6EMV8" FT /db_xref="InterPro:IPR002133" FT /db_xref="InterPro:IPR022628" FT /db_xref="InterPro:IPR022629" FT /db_xref="InterPro:IPR022630" FT /db_xref="InterPro:IPR022631" FT /db_xref="InterPro:IPR022636" FT /db_xref="UniProtKB/Swiss-Prot:B6EMV8" FT /protein_id="CAQ78237.1" FT /translation="MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETY FT VKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDIN FT QGVDKEDPKEQGAGDQGIMFGYATNETPILMPAPITYAHLLVKQQAEVRKSGKLDFLRP FT DAKSQVTFQYDQGKIVGIDAVVLSTQHSDSVTTADLREAVMEEIIKPVLPAEWLSKETK FT FFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARY FT VAKNIVAAGMADRCEIQLSYAIGVADPTSIMIETFGTEKVSHDIIIESVRQHFDLRPYG FT LQEMLNLLQPIYKKTAAYGHFGREEFPWEATDKAEILRDFAGIK" FT misc_feature complement(604272..604685) FT /gene="metK" FT /locus_tag="VSAL_I0552" FT /note="HMMPfam hit to PF02773, S-adenosylmethionine FT synthetase, C-te, score 8.9e-88" FT /inference="protein motif:HMMPfam:PF02773" FT misc_feature complement(604581..604607) FT /gene="metK" FT /locus_tag="VSAL_I0552" FT /note="PS00377 S-adenosylmethionine synthetase signature FT 2." FT /inference="protein motif:ProSite:PS00377" FT misc_feature complement(604689..605045) FT /gene="metK" FT /locus_tag="VSAL_I0552" FT /note="HMMPfam hit to PF02772, S-adenosylmethionine FT synthetase, cent, score 2.1e-79" FT /inference="protein motif:HMMPfam:PF02772" FT misc_feature complement(605004..605036) FT /gene="metK" FT /locus_tag="VSAL_I0552" FT /note="PS00376 S-adenosylmethionine synthetase signature FT 1." FT /inference="protein motif:ProSite:PS00376" FT misc_feature complement(605079..605378) FT /gene="metK" FT /locus_tag="VSAL_I0552" FT /note="HMMPfam hit to PF00438, S-adenosylmethionine FT synthetase, N-te, score 3.3e-62" FT /inference="protein motif:HMMPfam:PF00438" FT CDS complement(605512..605667) FT /transl_table=11 FT /locus_tag="VSAL_I0553" FT /old_locus_tag="TVS0384" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EMV9" FT /protein_id="CAQ78238.1" FT /translation="MSQSLIVTANVYLANKVLFFTILTENLVSVDKSNCRTQTIGYVLY FT LFSYPK" FT CDS 605768..607765 FT /transl_table=11 FT /gene="tktA" FT /locus_tag="VSAL_I0554" FT /old_locus_tag="TVS0385" FT /product="transketolase 1" FT /EC_number="2.2.1.1" FT /db_xref="GOA:B6EMW0" FT /db_xref="InterPro:IPR005474" FT /db_xref="InterPro:IPR005475" FT /db_xref="InterPro:IPR005476" FT /db_xref="InterPro:IPR005478" FT /db_xref="InterPro:IPR009014" FT /db_xref="InterPro:IPR015941" FT /db_xref="InterPro:IPR020826" FT /db_xref="UniProtKB/TrEMBL:B6EMW0" FT /protein_id="CAQ78239.1" FT /translation="MSSRKHLANAIRALSMDGVQQANSGHPGAPMGMADIAEVLWRSHL FT NHNPQNPEWADRDRFILSNGHGSMLIYSLLHLSGYNLSIEDLKNFRQLHSKTPGHPEYG FT YAPGIETTTGPLGQGITNGVGMAMAEKALAAQFNREGHDIVDHNTYVFMGDGCLMEGIS FT HEACSLAGTLGLGKLVAFWDDNGISIDGEVEGWFSDDTPKRFEAYGWHVIPAVDGHDAD FT AINAAIEAAKAETGRPTLICTKTIIGFGSPNKEGTHDCHGAPLGADEIVATKAKLGWEF FT GPFDIPTDVYAEWNAKEAGKAKEASWNAKFDAYAAAHPELAAEYKRRVNGGLPAEWEEK FT TSAIIADLQANPANIASRKASQNALEAFGAMLPEFMGGSADLAPSNLTMWSGSKSLTAD FT DFSGNYIHYGVREFAMTAIMNGIALHGGFVPYGATFLMFMEYARNAMRMAALMKIQNIQ FT VYTHDSIGLGEDGPTHQPVEQIASLRLTPNMSTWRPCDQVESAVAWKLAIERRDGPTAL FT IFSRQNLAQQDRDAEQVANIAKGGYILKDCEGQPELIFIATGSEVELAVEAAAQLTAEG FT KAVRVVSMPATDAFDKQDEAYRESVLPSAVTKRVAIEAGIADFWYKYVGFGGKIIGMTT FT FGESAPADELFKMFGFTTENAVKTAKELLA" FT misc_feature 605774..606769 FT /gene="tktA" FT /locus_tag="VSAL_I0554" FT /note="HMMPfam hit to PF00456, Transketolase, thiamine FT diphosphate b, score 3.6e-238" FT /inference="protein motif:HMMPfam:PF00456" FT misc_feature 605801..605863 FT /gene="tktA" FT /locus_tag="VSAL_I0554" FT /note="PS00801 Transketolase signature 1." FT /inference="protein motif:ProSite:PS00801" FT misc_feature 606830..607345 FT /gene="tktA" FT /locus_tag="VSAL_I0554" FT /note="HMMPfam hit to PF02779, Transketolase, pyridine FT binding domai, score 3.2e-65" FT /inference="protein motif:HMMPfam:PF02779" FT misc_feature 607013..607081 FT /gene="tktA" FT /locus_tag="VSAL_I0554" FT misc_feature 607169..607219 FT /gene="tktA" FT /locus_tag="VSAL_I0554" FT /note="PS00802 Transketolase signature 2." FT /inference="protein motif:ProSite:PS00802" FT misc_feature 607388..607735 FT /gene="tktA" FT /locus_tag="VSAL_I0554" FT /note="HMMPfam hit to PF02780, Transketolase, C-terminal FT domain, score 6.7e-15" FT /inference="protein motif:HMMPfam:PF02780" FT CDS 607905..608924 FT /transl_table=11 FT /gene="epd" FT /locus_tag="VSAL_I0555" FT /old_locus_tag="TVS0386" FT /product="erythrose-4-phosphate dehydrogenase" FT /db_xref="GOA:B6EMW1" FT /db_xref="InterPro:IPR006422" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020828" FT /db_xref="InterPro:IPR020829" FT /db_xref="InterPro:IPR020831" FT /db_xref="UniProtKB/Swiss-Prot:B6EMW1" FT /protein_id="CAQ78240.1" FT /translation="MLRVAINGFGRIGRSVLRALYESGKRDQIEIVAVNELSQPEGMAH FT LLQYDSTHGRFLHKVTHDQEYLYIDLPNGSQDRIRIVHQADISLLPWQSLQVDLVLDCT FT GVYGSKADGERHIDAGAKKVLFSHPGSADLDNTIIYGVNHDTLLPEHRVVSNGSCTTNC FT IIPVIKAIDDAFGIESGTITTIHSAMNDQPVIDAYHTDLRRTRAASQSIIPVDTKLHKG FT IERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASQCTLHNIVD FT YTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTALVMKK" FT misc_feature 607908..608381 FT /gene="epd" FT /locus_tag="VSAL_I0555" FT /note="HMMPfam hit to PF00044, Glyceraldehyde 3-phosphate FT dehydrogenase, NA, score 1.2e-74" FT /inference="protein motif:HMMPfam:PF00044" FT misc_feature 608394..608864 FT /gene="epd" FT /locus_tag="VSAL_I0555" FT /note="HMMPfam hit to PF02800, Glyceraldehyde 3-phosphate FT dehydrogenase, C-, score 1.1e-72" FT /inference="protein motif:HMMPfam:PF02800" FT misc_feature 609088..610233 FT /gene="pgk" FT /locus_tag="VSAL_I0556" FT /note="HMMPfam hit to PF00162, Phosphoglycerate FT kinase,score 4.8e-131" FT /inference="protein motif:HMMPfam:PF00162" FT CDS 609091..610254 FT /transl_table=11 FT /gene="pgk" FT /locus_tag="VSAL_I0556" FT /old_locus_tag="TVS0387" FT /product="phosphoglycerate kinase" FT /EC_number="2.7.2.3" FT /db_xref="GOA:B6EMW2" FT /db_xref="InterPro:IPR001576" FT /db_xref="InterPro:IPR015824" FT /db_xref="InterPro:IPR015901" FT /db_xref="InterPro:IPR015911" FT /db_xref="UniProtKB/Swiss-Prot:B6EMW2" FT /protein_id="CAQ78241.1" FT /translation="MSVIKMTDLELAGKRVFIRADLNVPVKDGKVTSDARILASLPTIK FT LCLEAGAKVMVTSHLGRPTEGEYNEEFSLAPVVNYLNDALDCDVKLAKDYLDGLELNAG FT ELVVLENVRFNKGEKKNEEALSKKYAALCDIFVMDAFGTAHRAQASTHGVGMNAPIACA FT GPLLAAELEALGKAMDNPARPLVAIVGGSKVSTKLTVLESLSKIADQLVVGGGIANTFI FT AAQGHNVGKSLYEADLVETAKKLMVECAIPVATDVACAKAFDENAEAEIKNVADVQDDD FT MIFDLGPDSTAVLADIIKNAKTILWNGPVGVFEFKNFEAGTAGISKAIADSEGFSVAGG FT GDTLAAIDKFGIKADVSYISTGGGAFLEFVEGKVLPAVAMLEERAKA" FT misc_feature 609133..609165 FT /gene="pgk" FT /locus_tag="VSAL_I0556" FT /note="PS00111 Phosphoglycerate kinase signature." FT /inference="protein motif:ProSite:PS00111" FT CDS 610409..611485 FT /transl_table=11 FT /gene="fbaA" FT /locus_tag="VSAL_I0557" FT /old_locus_tag="TVS0388" FT /product="fructose-bisphosphate aldolase class II" FT /EC_number="4.1.2.13" FT /db_xref="GOA:B6EMW3" FT /db_xref="InterPro:IPR000771" FT /db_xref="InterPro:IPR006411" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:B6EMW3" FT /experiment="The expressed protein is found to be exported FT (extracellular) by Aliivibrio salmonicida" FT /protein_id="CAQ78242.1" FT /translation="MSKIFDFVKPGVISGDDVQKVFAVAKENKFALPAVNVVNTDTINA FT VLEAASKAKAPVVVQFSNGGAGFFAGKGVKLEGQGAQILGAVAGAKYVHAVAESYGVPV FT ILHTDHAAKKLLPWIDGLLDAGEVFFAETGKPLFSSHMLDLSEESLEENIETCAKYLER FT MAKMNMTIEIELGCTGGEEDGVDNSDMDASELYTSPEDVAYAYEKLTAISPRFTIAASF FT GNVHGVYQAGNVVLTPTILRDSQAYCAEKFGIASDALNFVFHGGSGSSEAEIQESIGYG FT VIKMNIDTDTQWASWDGVRAYEAENRDFLQGQIGNPTGESAPNKKYYDPRVWLRAGQAS FT MVTRLEKAFADLNAIDVL" FT misc_feature 610451..611482 FT /gene="fbaA" FT /locus_tag="VSAL_I0557" FT /note="HMMPfam hit to PF01116, Fructose-bisphosphate FT aldolase class-II, score 1.4e-199" FT /inference="protein motif:HMMPfam:PF01116" FT misc_feature 610706..610741 FT /gene="fbaA" FT /locus_tag="VSAL_I0557" FT /note="PS00602 Fructose-bisphosphate aldolase class-II FT signature 1." FT /inference="protein motif:ProSite:PS00602" FT misc_feature 610919..610954 FT /gene="fbaA" FT /locus_tag="VSAL_I0557" FT /note="PS00806 Fructose-bisphosphate aldolase class-II FT signature 2." FT /inference="protein motif:ProSite:PS00806" FT CDS complement(611726..612976) FT /transl_table=11 FT /gene="srmB" FT /locus_tag="VSAL_I0558" FT /old_locus_tag="TVS0389" FT /product="ATP-dependent RNA helicase SrmB" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6EMW4" FT /db_xref="InterPro:IPR000629" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014014" FT /db_xref="UniProtKB/TrEMBL:B6EMW4" FT /protein_id="CAQ78243.1" FT /translation="MIKTFADLDLSPNLLRALEEIGYQRPTQVQAMAIPEALEGKDILA FT SAPTGTGKSAAFLLPALQHLDDFPRRDPGPARVLILTPTRELAIQVADEARELAKYTHH FT KVFTITGGISYQEHADILARTQDIVVATPGRLMEYIEAERFDCRAIETLILDEADRMLD FT MGFGPVVDRLSKECRWRKQTFLFSATLEGRGVDGFTADLLNEPAKIVAEPSRRERKKIT FT QWYHRADSLPHKIELLKSILTNQTERAIVFVKTRERLAELRGHLETAKISCAWLQGEMP FT QESRNNAISRFRDGKVNVLIATDVAARGIDLPDVSHVINFDMPRTADVYLHRIGRTARA FT GKKGNAVSLIEAHDQKMMERVGRYVKEEDEIIKERFVEGLKPTHKKAVFKNKQKKNAKK FT KAVLAKKNAPKKKKKKK" FT misc_feature complement(611954..612184) FT /gene="srmB" FT /locus_tag="VSAL_I0558" FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 5.1e-36" FT /inference="protein motif:HMMPfam:PF00271" FT misc_feature complement(612383..612898) FT /gene="srmB" FT /locus_tag="VSAL_I0558" FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score FT 1.8e-64" FT /inference="protein motif:HMMPfam:PF00270" FT misc_feature complement(612491..612517) FT /gene="srmB" FT /locus_tag="VSAL_I0558" FT /note="PS00039 DEAD-box subfamily ATP-dependent helicases FT signature." FT /inference="protein motif:ProSite:PS00039" FT misc_feature complement(612815..612838) FT /gene="srmB" FT /locus_tag="VSAL_I0558" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(613065..613769) FT /transl_table=11 FT /locus_tag="VSAL_I0559" FT /old_locus_tag="TVS0390" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EMW5" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR002296" FT /db_xref="InterPro:IPR007848" FT /db_xref="InterPro:IPR022882" FT /db_xref="UniProtKB/Swiss-Prot:B6EMW5" FT /protein_id="CAQ78244.1" FT /translation="MNKGFTFKQFHINIGLCGMPVSTDGVLLGAWANIEQSKNILDIGC FT GTGLLSLMSAQRNENSHVDAVELMPLAAEVALQNFVQSPWKNRLHLIHQDILHYHPAHL FT YDAIICNPPYFNNGEQSQKGERSIARHTDSLPFDKLLKCCKALMSSKGRASFILPFIEG FT NQFIEIAKKHSFHLTKLTKIQTTEKKDVSRLLIELSIFPYIYQETTLIIHSKDGYSNDF FT IQLTRHFYLNMA" FT misc_feature complement(613233..613718) FT /locus_tag="VSAL_I0559" FT /note="HMMPfam hit to PF05175, Methyltransferase small FT domain, score 2.9e-06" FT /inference="protein motif:HMMPfam:PF05175" FT misc_feature complement(613308..613649) FT /locus_tag="VSAL_I0559" FT /note="HMMPfam hit to PF08242, Methyltransferase FT domain,score 4.2e-06" FT /inference="protein motif:HMMPfam:PF08242" FT misc_feature complement(613428..613448) FT /locus_tag="VSAL_I0559" FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT CDS 614058..615371 FT /transl_table=11 FT /locus_tag="VSAL_I0560" FT /old_locus_tag="TVS0391" FT /product="branched chain amino acid transport system II FT carrier protein" FT /db_xref="GOA:B6EMW6" FT /db_xref="InterPro:IPR004685" FT /db_xref="UniProtKB/TrEMBL:B6EMW6" FT /protein_id="CAQ78245.1" FT /translation="MKQSLKLTDIIAVGFMLFAFFLGAGNIIFPPIAGQMAGEHVYSAM FT GGFLITAVGLPLMTIITIGVAGGSWQQLTRDLPPKVAIIMAILMFVIIGPAFAAPRTGL FT VAYEMAAKPFMSADAGQISLTLFSIAFFSIAMFFAWSQGKLIDTIGKFLTPALFIGLII FT LAIAVFVNPQGEIVAATGNYINQPLTTGFFEGYNTMDTFGALMFGILMIDALKKKGITD FT HKATTKYLTAAGCIAALGLAFVYVSLFYLGATSSSVAPGATNGGEILTAYTHALFGSSG FT QIVLSIIVMIACLTTAIGLISACADYFSSICKVTYKTWVIVVGVACAIVANVGLTQLIA FT LSVPVLFLLYPIAMALIVLAFLRHMMPNPRLAYRVVVTVATCFAVLDAAKVAGADMSAF FT SMLPMFDRGMAWVIPTFASIIIVRFIGKKEDELVTKEV" FT sig_peptide 614058..614129 FT /locus_tag="VSAL_I0560" FT misc_feature 614073..615344 FT /locus_tag="VSAL_I0560" FT /note="HMMPfam hit to PF05525, Branched-chain amino acid FT transport p, score 2.7e-206" FT /inference="protein motif:HMMPfam:PF05525" FT misc_feature order(614088..614156,614199..614267,614286..614354, FT 614412..614480,614499..614567,614625..614693, FT 614751..614819,614904..614972,615009..615077, FT 615090..615143,615180..615239,615282..615335) FT /locus_tag="VSAL_I0560" FT CDS complement(615500..616018) FT /transl_table=11 FT /gene="fldB" FT /locus_tag="VSAL_I0561" FT /old_locus_tag="TVS0392" FT /product="flavodoxin 2" FT /db_xref="GOA:B6EMW7" FT /db_xref="InterPro:IPR008254" FT /db_xref="InterPro:IPR010086" FT /db_xref="UniProtKB/TrEMBL:B6EMW7" FT /protein_id="CAQ78246.1" FT /translation="MKIGLFYGSSTCYTEMASEKIRSTIGEDIVDIFNIKDTSASAMND FT YDLLILGISTWDFGEIQEDWLAVWEELDGLSLKGKTIALFGLGDQGGYGEWFLDAMGLL FT HDELKATDATFIGYWKNEGYVFDASKALTEDESHFVGLALDEDSQYDKSDERIEQWCEQ FT ILVEYHDSL" FT misc_feature complement(615539..616006) FT /gene="fldB" FT /locus_tag="VSAL_I0561" FT /note="HMMPfam hit to PF00258, Flavodoxin, score 5.7e-37" FT /inference="protein motif:HMMPfam:PF00258" FT misc_feature complement(615776..615799) FT /gene="fldB" FT /locus_tag="VSAL_I0561" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 616155..617057 FT /transl_table=11 FT /gene="xerD" FT /locus_tag="VSAL_I0562" FT /old_locus_tag="TVS0393" FT /product="tyrosine recombinase XerD" FT /db_xref="GOA:B6EMW8" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR011932" FT /db_xref="InterPro:IPR013762" FT /db_xref="InterPro:IPR023009" FT /db_xref="InterPro:IPR023109" FT /db_xref="UniProtKB/TrEMBL:B6EMW8" FT /protein_id="CAQ78247.1" FT /translation="MVMNNDMALIERFLDTMWMERGLSENTLSSYRNDLMKLLNWLDEN FT HYKCASISAMGLNEYQAYLVDKQYKQTSRARMLSALRRFFQYLHREKIRGDDPTALLMS FT PKLPQRLPKDLSEEQVNDLLEAPNVDDPLELRDRAMLELLYATGLRVTELVSLTMENLS FT LRQGVVRVTGKGDKERLVPMGENAVYWIQTFLDQGRSTLLGEKSSDVVFPSRRARQMTR FT QTFWHRIKHYAVIAGIDTDKLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIY FT THVATERLKQIHQEHHPRS" FT misc_feature 616182..616430 FT /gene="xerD" FT /locus_tag="VSAL_I0562" FT /note="HMMPfam hit to PF02899, Phage integrase, N-terminal FT SAM-like, score 1.6e-26" FT /inference="protein motif:HMMPfam:PF02899" FT misc_feature 616521..617027 FT /gene="xerD" FT /locus_tag="VSAL_I0562" FT /note="HMMPfam hit to PF00589, Phage integrase family,score FT 3.1e-65" FT /inference="protein motif:HMMPfam:PF00589" FT CDS 617137..617913 FT /transl_table=11 FT /gene="dsbC" FT /locus_tag="VSAL_I0563" FT /old_locus_tag="TVS0394" FT /product="thiol/disulfide interchange protein DsbC FT precursor" FT /db_xref="GOA:B6EMW9" FT /db_xref="InterPro:IPR009094" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR017937" FT /db_xref="InterPro:IPR018950" FT /db_xref="UniProtKB/TrEMBL:B6EMW9" FT /protein_id="CAQ78248.1" FT /translation="MSFIRRTSAMIIALLSVASFTACSDEQVKETATPASPVVASNSDS FT TIAITQRLTTLGLPVEAIHDSDIDGFKQVETPFGIFYVSDDGKHFIQGRIFEFDENGNM FT KDLLAARFAKLVDSQSENMIVFPAKNEKYVITVFTDITCGYCTKLHKEMKDYNDAGITV FT RYLAYPRQGYQGSVADKMAQVWCADDKQQAMEDAKSNRPINGSKPATAQCKNIIKEQYL FT LGRKMGVNGTPAIVLPNGDLVPGYKPAKELLADLEK" FT sig_peptide 617137..617208 FT /gene="dsbC" FT /locus_tag="VSAL_I0563" FT misc_feature 617539..617595 FT /gene="dsbC" FT /locus_tag="VSAL_I0563" FT /note="PS00194 Thioredoxin family active site." FT /inference="protein motif:ProSite:PS00194" FT CDS 617993..619732 FT /transl_table=11 FT /gene="recJ" FT /locus_tag="VSAL_I0564" FT /old_locus_tag="TVS0395" FT /product="single-stranded-DNA-specific exonuclease RecJ" FT /EC_number="3.1.-.-" FT /db_xref="GOA:B6EMX0" FT /db_xref="InterPro:IPR001667" FT /db_xref="InterPro:IPR003156" FT /db_xref="InterPro:IPR004610" FT /db_xref="UniProtKB/TrEMBL:B6EMX0" FT /protein_id="CAQ78249.1" FT /translation="MIEVKRRIIPVIPNFPSSIPSILQRIYATRGITSNNQLERGAKHL FT LSFQSMHGIEKAVDILVEAIAKQTRIIVVGDFDVDGATSSALSVMAFRMMGSNNVDYLV FT PNRFEDGYGLSPDVVDQAKAMGAEIIMTVDNGVSSIDGVAAAKAYGMQVVVTDHHLPGS FT SLPIADSIVNPNLEECAFPSKSLAGVGVAFYLMLAIRARLRENNWFETQNIPIPNLADL FT LDLVALGTVADLVALDENNRILVHQGIQRIRAGKCRPGIQALIEVANKVPSRINASDFG FT FALGPRINAAGRLDDMSFGVELLMSNNIHAARRMASELDALNQTRKEIEQGMKEEAMAI FT CERLEFGAQSELPFGLVLFQRDWHQGVIGILASRLKEKYHRPVIAFADGGDGLIKGSCR FT SISGFHMRDALDLIDTRNPGLILKFGGHAMAAGLSIKEVDYKRFSQAFDDVVRESVEEE FT ALTGVVLSDGELMPEEFTLGTAEILRAGGPWGQAFPEPIFDGEFKVLNQRLVGEKHLKL FT MLEPIHKDFPTNKMIDAIAFNIDVRRWPDASVQKVKLAYRLDINEFRGNQTLQLMVDYI FT EPI" FT misc_feature 618182..618685 FT /gene="recJ" FT /locus_tag="VSAL_I0564" FT /note="HMMPfam hit to PF01368, DHH family, score 1.3e-51" FT /inference="protein motif:HMMPfam:PF01368" FT misc_feature 619130..619339 FT /gene="recJ" FT /locus_tag="VSAL_I0564" FT /note="HMMPfam hit to PF02272, DHHA1 domain, score 1.8e-16" FT /inference="protein motif:HMMPfam:PF02272" FT CDS join(619999..620073,620075..621097) FT /pseudo FT /transl_table=11 FT /gene="prfB" FT /locus_tag="VSAL_I0565" FT /old_locus_tag="TVS0396" FT /product="peptide chain release factor 2 (RF-2) FT (pseudogene)" FT /note="Similar to Salmonella typhimurium Peptide chain FT release factor 2 PrfB (RF-2) UniProt:P0A289 (365 aa) fasta FT scores: E()=2.3e-90, 80.935% id in 278 aa. Contains a FT framshift after codon 25. The sequence has been checked and FT is believed to be correct" FT /db_xref="PSEUDO:CAQ78250.1" FT /inference="similar to sequence:UniProt:P0A289" FT misc_feature 620261..620584 FT /gene="prfB" FT /locus_tag="VSAL_I0565" FT /note="HMMPfam hit to PF03462, PCRF domain, score 7e-53" FT /inference="protein motif:HMMPfam:PF03462" FT misc_feature 620672..621010 FT /gene="prfB" FT /locus_tag="VSAL_I0565" FT /note="HMMPfam hit to PF00472, Peptidyl-tRNA hydrolase FT domain, score 6.6e-71" FT /inference="protein motif:HMMPfam:PF00472" FT misc_feature 620732..620782 FT /gene="prfB" FT /locus_tag="VSAL_I0565" FT /note="PS00745 Prokaryotic-type class I peptide chain FT release factors signature." FT /inference="protein motif:ProSite:PS00745" FT CDS 621111..622616 FT /transl_table=11 FT /gene="lysU" FT /locus_tag="VSAL_I0566" FT /old_locus_tag="TVS0397" FT /product="lysyl-tRNA synthetase, heat inducible" FT /EC_number="6.1.1.6" FT /db_xref="GOA:B6EMX2" FT /db_xref="InterPro:IPR002313" FT /db_xref="InterPro:IPR004364" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018149" FT /db_xref="InterPro:IPR018150" FT /db_xref="UniProtKB/Swiss-Prot:B6EMX2" FT /protein_id="CAQ78251.1" FT /translation="MTDQVQLDENKLIAERRGKLDHIRQACKANGHPNDFRRDSLAADL FT QSEFGEKTKEELEELNHIVAIAGRVMAKRGPFLLIQEVSGKIQAYASKDVQKELKEKYQ FT GLDIGDIIGVKGALHKSGKGDLYVNMEEFVLLTKALRPLPEKFHGLTDQEMRYRQRYVD FT LIVNEDSRTAFIIRSKVVSAIRNFMVDKGFMEVETPMMHVIPGGASARPFVTHHNALDV FT DMYLRVAPELYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLM FT DLTEAMLSQVAISVLGSDKMPYGEYTVDFGGKYARLSMLDAIKMYNPEHAEIQALTYDG FT VQDRDLMVSIAKSVHVEVESFWTCGQLLEEIFGETAEPKLMQPTFITEYPADISPLARR FT NDNNAFITDRFEFFIGGREVANGFSELNDAQDQDERFKAQVSAKESGDDEAMFYDADYI FT TALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPSMRPQA" FT misc_feature 621300..621518 FT /gene="lysU" FT /locus_tag="VSAL_I0566" FT /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding FT domain, score 4.4e-13" FT /inference="protein motif:HMMPfam:PF01336" FT misc_feature 621564..622607 FT /gene="lysU" FT /locus_tag="VSAL_I0566" FT /note="HMMPfam hit to PF00152, tRNA synthetases class II FT (D, K and N), score 6.6e-127" FT /inference="protein motif:HMMPfam:PF00152" FT misc_feature 621864..621917 FT /gene="lysU" FT /locus_tag="VSAL_I0566" FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT /inference="protein motif:ProSite:PS00179" FT misc_feature 622524..622553 FT /gene="lysU" FT /locus_tag="VSAL_I0566" FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT /inference="protein motif:ProSite:PS00339" FT CDS 623013..624350 FT /transl_table=11 FT /locus_tag="VSAL_I0567" FT /old_locus_tag="TVS0398" FT /product="sigma-54 interacting regulatory protein" FT /note="Similar to Escherichia coli Transcriptional FT regulatory protein ZraR UniProt:P14375 (441 aa) fasta FT scores: E()=2.5e-36, 34.197% id in 386 aa" FT /db_xref="GOA:B6EMX3" FT /db_xref="InterPro:IPR002078" FT /db_xref="InterPro:IPR002197" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR020441" FT /db_xref="UniProtKB/TrEMBL:B6EMX3" FT /inference="similar to sequence:UniProt:P14375" FT /protein_id="CAQ78252.1" FT /translation="MGTQFRMDSVPGSLVVVGGSYEPWLAVLEQVGWRCHRCYDLRAAQ FT TLFDEIGPCIGIVDLSQDDFSLNGIATLVNNNKQVRWIAFIRESQLGSDTICQFIVNFC FT IDFFTAPIPDAQLLSTIGHQLGMLKLERKVWPNLGNKSDLGILGEAPAVKRLRDQIRRV FT APTDVSILISGESGVGKDVVAKAVHDSSGRNKGPFVSLNCGSLSEVKIEQELFGLNSEF FT PETSKLLQANGGTLFLNDINDLPVSQQQLLLRFLQESNMETPQGLVDLDVRVIVASHID FT LEKAIEEGDFKEELYYRLNVLRIHVPALKERSSDISILAEHFLQRYAKEYNTQARTFSE FT EALQTMIHYPWPGNVRELVNQVKRAVLLADSMTIDLEHLDLPQRNDTKRSLRTIRENSE FT RDALLLVLESHDGQVSSAAKELGVSRATMYRLLNKHNLISEPRTYS" FT misc_feature 623448..624089 FT /locus_tag="VSAL_I0567" FT /note="HMMPfam hit to PF00158, Sigma-54 interaction domain, FT score 1.1e-75" FT /inference="protein motif:HMMPfam:PF00158" FT misc_feature 623520..623561 FT /locus_tag="VSAL_I0567" FT /note="PS00675 Sigma-54 interaction domain ATP-binding FT region A signature." FT /inference="protein motif:ProSite:PS00675" FT misc_feature 624063..624092 FT /locus_tag="VSAL_I0567" FT /note="PS00688 Sigma-54 interaction domain C-terminal part FT signature." FT /inference="protein motif:ProSite:PS00688" FT misc_feature 624195..624317 FT /locus_tag="VSAL_I0567" FT /note="HMMPfam hit to PF02954, Bacterial regulatory FT protein, Fis fam, score 6.1e-08" FT /inference="protein motif:HMMPfam:PF02954" FT misc_feature 624246..624311 FT /locus_tag="VSAL_I0567" FT /note="Predicted helix-turn-helix motif with score FT 1644.000, SD 4.79 at aa 412-433, sequence FT GQVSSAAKELGVSRATMYRLLN" FT CDS complement(624417..625085) FT /transl_table=11 FT /gene="mutH" FT /locus_tag="VSAL_I0568" FT /old_locus_tag="TVS0399" FT /product="DNA mismatch repair protein MutH" FT /db_xref="GOA:B6EMX4" FT /db_xref="InterPro:IPR004230" FT /db_xref="InterPro:IPR011335" FT /db_xref="InterPro:IPR011337" FT /db_xref="UniProtKB/TrEMBL:B6EMX4" FT /protein_id="CAQ78253.1" FT /translation="MTPLPPKTIDELLSRAESIAGYTLAELALQAGIPVPENLKRDKGW FT VGQLLEWHLGASAGSKPVPDFIDLDIELKTIPISHSGKPLETTFVCVAPLTGVHSLQWK FT ESHVRHKLSHVLWIPVEGEREIPVGDRHVGYPVLWKPSIKEEQQLQQDWEELMDLIVLG FT KVESITARHGEVLQLRPKAANSRALTEAYGDNGQPIKTLPRGFYLKTHFTHSILTSFFN FT " FT misc_feature complement(624630..624932) FT /gene="mutH" FT /locus_tag="VSAL_I0568" FT /note="HMMPfam hit to PF02976, DNA mismatch repair enzyme FT MutH, score 1.7e-40" FT /inference="protein motif:HMMPfam:PF02976" FT CDS 625679..626191 FT /transl_table=11 FT /gene="nudH" FT /locus_tag="VSAL_I0569" FT /old_locus_tag="TVS0401" FT /product="(di)nucleoside polyphosphate hydrolase" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6EMX5" FT /db_xref="InterPro:IPR000086" FT /db_xref="InterPro:IPR015797" FT /db_xref="InterPro:IPR020084" FT /db_xref="InterPro:IPR020476" FT /db_xref="InterPro:IPR022927" FT /db_xref="UniProtKB/Swiss-Prot:B6EMX5" FT /protein_id="CAQ78254.1" FT /translation="MIDGDGFRPNVGIVICNSHGQVFWAKRYGQHSWQFPQGGIDDGET FT PEQAMYRELYEEVGLTKNDVRILASSRHWLRYKLPKRLVRWDSKPVCIGQKQKWFLLRL FT ECDESKVNMQRDRSPEFDGWRWVSYWYPVRQVVSFKRDVYRRALKEFAAIAMPFKERKF FT KRKGKKG" FT misc_feature 625697..626128 FT /gene="nudH" FT /locus_tag="VSAL_I0569" FT /note="HMMPfam hit to PF00293, NUDIX domain, score 3.9e-28" FT /inference="protein motif:HMMPfam:PF00293" FT misc_feature 625790..625849 FT /gene="nudH" FT /locus_tag="VSAL_I0569" FT /note="PS00893 mutT domain signature." FT /inference="protein motif:ProSite:PS00893" FT CDS 626228..628489 FT /transl_table=11 FT /gene="ptsP" FT /locus_tag="VSAL_I0570" FT /old_locus_tag="TVS0402" FT /product="phosphoenolpyruvate-protein phosphotransferase FT PtsP" FT /EC_number="2.7.3.9" FT /db_xref="GOA:B6EMX6" FT /db_xref="InterPro:IPR000121" FT /db_xref="InterPro:IPR003018" FT /db_xref="InterPro:IPR006318" FT /db_xref="InterPro:IPR008279" FT /db_xref="InterPro:IPR008731" FT /db_xref="InterPro:IPR015813" FT /db_xref="InterPro:IPR018274" FT /db_xref="InterPro:IPR023151" FT /db_xref="UniProtKB/TrEMBL:B6EMX6" FT /protein_id="CAQ78255.1" FT /translation="MLTQLRDIVDQVAKAESLDDALALLVKSTRHSMRTECCSVYLMSN FT DSLRLELMATEGLKAKPNTVSLSIDEGLVGLVARSCEPLNLANASVHPSYKYIPSIAEY FT KFNSFLATPIIYRRQNLGVLVVQQKEKRQFTEVEESFIVTLSAQLAVVLAHAKAQESWS FT SQLQLTSVNQKQFKGLSASTGVAIAPLWFDDAQPNVEAVLPSSCIDIEKEQDRLGSAIE FT FALKDFRRAKKRFEQELNTETLAIFDLFTHLLNDPMLKGDLKKQINQGDSAEWALRQVI FT ESYAARFGRMSDSYLSERANDVRELGQRLLYFLNYENKFDLELSEPVILVTTQLTASML FT ASIPREKLKAVISLEGAANSHAAILSRALGIPAIMGVEFNPAHYHQKLAIVDGYSGMLY FT IKPTEALVQEYIELQNEELALSQLITLDLDKPTFTRDAHQMRIHLNAGLSADTTIAVNQ FT GVDGVGLYRTEIPFLLQQRFPSEEEQYLQYKSILETYIDKPVIMRTLDIGGDKPLPYLP FT IEEDNPFLGWRGIRFTLDHPDIFLLQLKAMVRANIGNNNLSIMLPMISGIPELKQSRKL FT INQAYEEVLNESGVSFVLPRIGMMIEVPSMLYLLPRITELVDFISVGTNDLTQYLLAVD FT RNNSRVSHVYESYHPAVLLALKQIIDTAQQYNLPVSVCGELAGDPIGCLLLMGLGYEHL FT SMNTSNVAKVKYIIRKVTLEEVKEIVEKLLHHDDAESILADMMVFFEKHDLSGFIRAGK FT " FT misc_feature 626276..626686 FT /gene="ptsP" FT /locus_tag="VSAL_I0570" FT /note="HMMPfam hit to PF01590, GAF domain, score 3.5e-23" FT /inference="protein motif:HMMPfam:PF01590" FT misc_feature 626753..627127 FT /gene="ptsP" FT /locus_tag="VSAL_I0570" FT /note="HMMPfam hit to PF05524, PEP-utilising FT enzyme,N-terminal, score 6.2e-38" FT /inference="protein motif:HMMPfam:PF05524" FT misc_feature 627137..627415 FT /gene="ptsP" FT /locus_tag="VSAL_I0570" FT /note="HMMPfam hit to PF00391, PEP-utilising enzyme,mobile FT domain, score 2.6e-20" FT /inference="protein motif:HMMPfam:PF00391" FT misc_feature 627293..627328 FT /gene="ptsP" FT /locus_tag="VSAL_I0570" FT /note="PS00370 PEP-utilizing enzymes phosphorylation site FT signature." FT /inference="protein motif:ProSite:PS00370" FT misc_feature 627488..628366 FT /gene="ptsP" FT /locus_tag="VSAL_I0570" FT /note="HMMPfam hit to PF02896, PEP-utilising enzyme, TIM FT barrel doma, score 1.8e-123" FT /inference="protein motif:HMMPfam:PF02896" FT misc_feature 628079..628135 FT /gene="ptsP" FT /locus_tag="VSAL_I0570" FT /note="PS00742 PEP-utilizing enzymes signature 2." FT /inference="protein motif:ProSite:PS00742" FT CDS 628490..629293 FT /transl_table=11 FT /locus_tag="VSAL_I0571" FT /old_locus_tag="TVS0403" FT /product="integral membrane protein" FT /db_xref="GOA:B6EMX7" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:B6EMX7" FT /protein_id="CAQ78256.1" FT /translation="MVISVWELFALYLALGSIVGVMAGLLGIGGGLLVVPALLWLLPQA FT GISPDIVMQMALGTSLATIILTSASSALNHLRLGNVEFKLIKGLAPGVIVGGFLGSYAA FT ELIPSQYLPKVFGVIVLLLALQMLLALKFTATRPLPSPLKVGISGGFIGVISSLAGIGG FT GSLTVPYLNFHGVEMRKAIGSSSLCGMLIAMAGMIGFIIHGAQVSDLPPMSLGYVYLPA FT LCGVGLTSIFTTRIGAKLTSYLPTPTLKKIFAVFLVFIGTKMFLG" FT sig_peptide 628490..628558 FT /locus_tag="VSAL_I0571" FT misc_feature order(628514..628582,628640..628708,628742..628810, FT 628820..628888,628922..628990,629033..629101, FT 629135..629203) FT /locus_tag="VSAL_I0571" FT misc_feature 628517..629284 FT /locus_tag="VSAL_I0571" FT /note="HMMPfam hit to PF01925, Domain of unknown function FT DUF81, score 6.4e-39" FT /inference="protein motif:HMMPfam:PF01925" FT CDS 629304..630155 FT /transl_table=11 FT /gene="lgt" FT /locus_tag="VSAL_I0572" FT /old_locus_tag="TVS0404" FT /product="prolipoprotein diacylglyceryl transferase" FT /EC_number="2.4.99.-" FT /db_xref="GOA:B6EMX8" FT /db_xref="InterPro:IPR001640" FT /db_xref="UniProtKB/Swiss-Prot:B6EMX8" FT /protein_id="CAQ78257.1" FT /translation="MSQGYLNFPHIDPILFQIGPLAIRWYGLMYLFGFMFALWLANKRA FT DKPNSGWTKDQVSDLLFAGFLGVVIGGRIGYVLFYNFGYFLDNPLYLFEVWTGGMSFHG FT GLLGVISAMLWYGYKNNRSFFTIADFVAPLVPFGLGAGRLGNFMNGELWGRVTDVPWAM FT VFPSGGPFPRHPSQLYEFALEGIVLFLILNWFIRKPRPLGAVSGLFLFGYGTFRFLVEY FT VREPDAQLGLFGDWISMGQILSLPMVIGGLLMMVWAFKRNLYATDLKNSGDKQNSSKQK FT AK" FT misc_feature 629334..630086 FT /gene="lgt" FT /locus_tag="VSAL_I0572" FT /note="HMMPfam hit to PF01790, Prolipoprotein FT diacylglyceryl transferase, score 9.1e-142" FT /inference="protein motif:HMMPfam:PF01790" FT misc_feature order(629361..629429,629487..629555,629598..629657, FT 629670..629738,629832..629891,629910..629969, FT 630012..630080) FT /gene="lgt" FT /locus_tag="VSAL_I0572" FT misc_feature 629727..629765 FT /gene="lgt" FT /locus_tag="VSAL_I0572" FT /note="PS01311 Prolipoprotein diacylglyceryl transferase FT signature." FT /inference="protein motif:ProSite:PS01311" FT CDS 630234..631091 FT /transl_table=11 FT /gene="thyA" FT /locus_tag="VSAL_I0573" FT /old_locus_tag="TVS0405" FT /product="thymidylate synthase" FT /EC_number="2.1.1.45" FT /note="Possible start codon at codon 3" FT /db_xref="GOA:B6EMX9" FT /db_xref="InterPro:IPR000398" FT /db_xref="InterPro:IPR020940" FT /db_xref="InterPro:IPR023451" FT /db_xref="UniProtKB/TrEMBL:B6EMX9" FT /protein_id="CAQ78258.1" FT /translation="MTVKQYLDLCQRIVSEGTWIENERTGKRCLTVINADLTYDVANGE FT FPLVTTRKSFWKSAVAEMIGYIRGYDNAEDFRQIGTKTWDANANLNNAWLNNPHRKGED FT DMGRVYGVQGRSWAKPNGEFVDQLKKIIDDLSQGIDDRGEILNFYNPGEFDIGCLRPCM FT YSHHFSLLGDTLYLNSTQRSCDVPLGLNFNMVQVYFLLAIVAQITGHKAGKAYHKIVNG FT HIYEDQLELMKDVQLKREPLKAPVFKINPKITSLEDLETWVTMDDFEVIGYESHEVIKY FT PFSV" FT misc_feature 630234..631088 FT /gene="thyA" FT /locus_tag="VSAL_I0573" FT /note="HMMPfam hit to PF00303, Thymidylate synthase, score FT 9.7e-52" FT /inference="protein motif:HMMPfam:PF00303" FT CDS complement(631160..632305) FT /transl_table=11 FT /gene="nptA" FT /locus_tag="VSAL_I0574" FT /old_locus_tag="TVS0406" FT /product="sodium-dependent phosphate pump" FT /db_xref="GOA:B6EMY0" FT /db_xref="InterPro:IPR003841" FT /db_xref="UniProtKB/TrEMBL:B6EMY0" FT /protein_id="CAQ78259.1" FT /translation="MNTQSIPAATMSNTSRMLRWANLAFMLYLLLLAVAMVGTGFKWSV FT GEQAKVLFEFASHPIAGLMIGLVATALIQSSSTVTSIIVGLVASGLPVETAIPMVMGAN FT IGTTVTNTLVSLGHARCKVEFRRAFTCATVHDFFNLLAVAIFLPLEMMFGIFQKLSAWL FT VSPLLNAGDMSIKGFDFIKPITKPVISAIKEPLSTFGSMTGGLLMIGLCIAILIIAITL FT MGKLMKSLMVGRAKDILKSAIGRGPLHGIASGTVVTVLVQSSSTTTSLMVPLVGTGVLK FT IRDVYPFTLGANIGTCVTALLAATAVSGEYAVFALQIALVHLCFNVIATLVIYGTPFLR FT ELPLKGAEWIAEMANRNKGVVAGYLSFVFIILPGSVLALTV" FT misc_feature complement(order(631169..631228,631289..631357, FT 631385..631453,631634..631702,631838..631897, FT 632087..632155,632183..632248)) FT /gene="nptA" FT /locus_tag="VSAL_I0574" FT misc_feature complement(631187..631663) FT /gene="nptA" FT /locus_tag="VSAL_I0574" FT /note="HMMPfam hit to PF02690, Na+/Pi-cotransporter, score FT 5.4e-25" FT /inference="protein motif:HMMPfam:PF02690" FT misc_feature complement(631751..632221) FT /gene="nptA" FT /locus_tag="VSAL_I0574" FT /note="HMMPfam hit to PF02690, Na+/Pi-cotransporter, score FT 1.4e-56" FT /inference="protein motif:HMMPfam:PF02690" FT sig_peptide complement(632201..632305) FT /gene="nptA" FT /locus_tag="VSAL_I0574" FT CDS 632642..633583 FT /transl_table=11 FT /gene="nhaR" FT /locus_tag="VSAL_I0575" FT /old_locus_tag="TVS0407" FT /product="transcriptional activator protein NhaR FT (sodium/proton antiporter regulator protein)" FT /db_xref="GOA:B6EMY1" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EMY1" FT /protein_id="CAQ78260.1" FT /translation="MTYLLEKINVGTVMSHLNYNHLYYFWMVCKQGSVTKAAEALFLTP FT QTVTGQIKALEERVDGKLTKRNGRNIEPTELGQLIYKYADRMFGLSYEMLDIVNYSQQS FT NVLFDVGVADALSKRLVSKVLSTTIPEDASIHLRCFESTHELLLEQLSQHKLDMILSDC FT PVDSSQNSGLFSKKLGECGMSFFCSKEMTDIQFPEVLEIKKVLIPGSRTSMGRKVVQWC FT DQQGITPNILGEFDDVALMKAFARENDSVFLAPTVYMNEADSDLSLHRIADVKDLKEEY FT YVIFAERMIQHPAVKSICEADFSQLFDFNLQK" FT misc_feature 632696..632875 FT /gene="nhaR" FT /locus_tag="VSAL_I0575" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 5.4e-18" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature 632735..632800 FT /gene="nhaR" FT /locus_tag="VSAL_I0575" FT /note="Predicted helix-turn-helix motif with score FT 1368.000, SD 3.85 at aa 32-53, sequence FT GSVTKAAEALFLTPQTVTGQIK" FT misc_feature 632738..632830 FT /gene="nhaR" FT /locus_tag="VSAL_I0575" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature 632942..633562 FT /gene="nhaR" FT /locus_tag="VSAL_I0575" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 0.00017" FT /inference="protein motif:HMMPfam:PF03466" FT CDS 633619..633930 FT /transl_table=11 FT /gene="hlyU" FT /locus_tag="VSAL_I0576" FT /old_locus_tag="TVS0408" FT /product="transcriptional activator HlyU" FT /db_xref="GOA:B6EMY2" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EMY2" FT /protein_id="CAQ78261.1" FT /translation="MAGIFMDLQQMEKNAPQAVTLLKAMANERRLFILCLLLEGELSVG FT QIAEQLSLSQSALSQHLGWLRKDALVSTRKESQTVFYSLSSHEVKSVIQLLHNLYCSK" FT misc_feature 633697..633837 FT /gene="hlyU" FT /locus_tag="VSAL_I0576" FT /note="HMMPfam hit to PF01022, Bacterial regulatory FT protein, arsR family, score 1.4e-15" FT /inference="protein motif:HMMPfam:PF01022" FT misc_feature 633742..633807 FT /gene="hlyU" FT /locus_tag="VSAL_I0576" FT /note="Predicted helix-turn-helix motif with score FT 1737.000, SD 5.10 at aa 42-63, sequence FT LSVGQIAEQLSLSQSALSQHLG" FT CDS complement(634052..634312) FT /transl_table=11 FT /gene="rpsT" FT /locus_tag="VSAL_I0577" FT /old_locus_tag="TVS0409" FT /product="30S ribosomal protein S20" FT /db_xref="GOA:B6EMY3" FT /db_xref="InterPro:IPR002583" FT /db_xref="UniProtKB/Swiss-Prot:B6EMY3" FT /protein_id="CAQ78262.1" FT /translation="MANSKSAKKRATQAERRRQHNASRRSMMRTYMKKTIAAIEAGDKE FT AATAALAIATPLLDRMATKGLIHKNKAARHKARFTAAIKAL" FT misc_feature complement(634058..634309) FT /gene="rpsT" FT /locus_tag="VSAL_I0577" FT /note="HMMPfam hit to PF01649, Ribosomal protein S20,score FT 5.4e-42" FT /inference="protein motif:HMMPfam:PF01649" FT CDS 634534..636093 FT /transl_table=11 FT /gene="mviN" FT /locus_tag="VSAL_I0578" FT /old_locus_tag="TVS0416" FT /product="virulence factor MviN homolog" FT /db_xref="InterPro:IPR004268" FT /db_xref="UniProtKB/TrEMBL:B6EMY4" FT /protein_id="CAQ78263.1" FT /translation="MSKRLLRSGLIVSIMTLVSRVLGLVRDVVVANLMGAGASADVFFF FT ANKIPNFLRRLFAEGAFSQAFVPVLTEYHASGDDNKTRELIAKASGTLGVLVTIVTFFG FT ILGSGVVTALFGAGWFMDWLNDGPNAPKFELASFLLKITFPYLWFITFVALSGAILNTL FT GKFAVSSFTPVFLNVAIIACAYFISPNLEQPEIGLAIGVFLGGLIQFLFQIPFLYKAKM FT LVRPQWGWNDPGVVKIRTLMIPALFGVSVSQINLLFDTFIASFLATGSISWLYYSDRLL FT EFPLGLFGIAIATVILPALSRQHVDAKGAGFSNTMDWGVRMVILLGIPAMLGLMVLAKP FT MLMVLFMRGEFSPNDVHNASLSLIAYGSGLLNFMLIKILAPGYYARQDTKTPVRYGIIA FT MVTNMVFNAIFASFYGYVGLAMATALSAFVNMALLYRGLHLANVYKLSKETMIFIVKLV FT LSGAIMVGVLLWFIPAMNVWLEWDLAKRMAMLLSFIALGAVSYLIPAVILGLRPRQLRV FT NA" FT sig_peptide 634534..634602 FT /gene="mviN" FT /locus_tag="VSAL_I0578" FT misc_feature order(634546..634605,634615..634674,634810..634878, FT 634957..635025,635029..635097,635125..635193, FT 635254..635322,635380..635436,635497..635565, FT 635608..635676,635710..635778,635788..635847, FT 635884..635952,635995..636063) FT /gene="mviN" FT /locus_tag="VSAL_I0578" FT misc_feature 634621..636006 FT /gene="mviN" FT /locus_tag="VSAL_I0578" FT /note="HMMPfam hit to PF03023, MviN-like protein, score FT 3.3e-167" FT /inference="protein motif:HMMPfam:PF03023" FT CDS 636184..637116 FT /transl_table=11 FT /gene="ribF" FT /locus_tag="VSAL_I0579" FT /old_locus_tag="TVS0417" FT /product="riboflavin biosynthesis protein RibF" FT /EC_number="2.7.1.26" FT /db_xref="GOA:B6EMY5" FT /db_xref="InterPro:IPR002606" FT /db_xref="InterPro:IPR004821" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015864" FT /db_xref="InterPro:IPR015865" FT /db_xref="InterPro:IPR023465" FT /db_xref="InterPro:IPR023468" FT /db_xref="UniProtKB/TrEMBL:B6EMY5" FT /protein_id="CAQ78264.1" FT /translation="MELIRGIHNITPNHQGCVMTIGNFDGVHLGHQQVLQQVKGKAKQL FT GLPSVVMTFDPQPMEFFAKEKAPARLTRLRDKFVQLNKLDIDRLLCINFNHKFAQQTAD FT EFVEHLLVKLLGVKFLVIGDDFCFGKHRLGNFDMLQKAGEKYGFEVVNTKSFCIEKQRV FT SSTAIRNALAENRLKDVAVMLGRDYSITGRVSHGRKLGRTIGFPTANIPLKRCVSPVSG FT VYVVQAKDSSGKQLGGVANIGHRPTVDGVRQQLEVHFFDYKGNLYGQQLDVELLCKLRD FT EHKFESFDALKQQIELDSQAARVWLSENK" FT misc_feature 636226..636684 FT /gene="ribF" FT /locus_tag="VSAL_I0579" FT /note="HMMPfam hit to PF06574, FAD synthetase, score FT 3.8e-86" FT /inference="protein motif:HMMPfam:PF06574" FT misc_feature 636730..637104 FT /gene="ribF" FT /locus_tag="VSAL_I0579" FT /note="HMMPfam hit to PF01687, Riboflavin kinase, score FT 6.7e-49" FT /inference="protein motif:HMMPfam:PF01687" FT CDS 637153..640011 FT /transl_table=11 FT /gene="ileS" FT /locus_tag="VSAL_I0580" FT /old_locus_tag="TVS0418" FT /product="isoleucyl-tRNA synthetase" FT /EC_number="6.1.1.5" FT /db_xref="GOA:B6EMY6" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002300" FT /db_xref="InterPro:IPR002301" FT /db_xref="InterPro:IPR009008" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR010663" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR023585" FT /db_xref="UniProtKB/Swiss-Prot:B6EMY6" FT /protein_id="CAQ78265.1" FT /translation="MSDYKETLNLPETGFPMRGNLANREPVMLKHWYDEDLYGEIRKAK FT KGKKSFILHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGLPIEL FT MVEKKKGKPGQKISAAEFREECRKYAAVQVEGQKESFKRLGIMGEWDKPYRTMDFGTEA FT NIIRSLGKIADQGHLLKGFKPVHWCTDCGSALAEAEVEYQDKFSPSIDVRFVAADEAAT FT LAKFSTPEGHQGEGELSVVIWTTTPWTLPANRAVALHADLEYVLVQVEAHGEQKAERLI FT LASELAKSVMDRAGIEHFHNLGFAKGSELELLQFNHPFYGFTVPAILGEHVTVDSGTGI FT VHTAPGHGQEDFVVGKKYDLEIANPVGSNGVYLPDTELFAGQHVFKANDSVIDVLKEKG FT ALLHHHAIEHSYPHCWRHKTPIIFRATPQWFISMDQAGLRAKALEEVKSVEWMPEWGQS FT RIEGMIEGRPEWCISRQRTWGVPIALFVHKETSELHPDSLELIEKVAKLVEEKGIQAWW FT DLDIAELMGEDDATKYEKVLDTLDVWFDSGVTHFSVVDSREEYNFPQEERTHSADLYLE FT GSDQHRGWFQSSLISSVAMKGKAPYRQVLTHGFVVDGNGRKMSKSVGNVVAPKDVTNKL FT GADILRLWVASTDYTNEVAVSDEILKRSADAYRRIRNTARFFLANLNGFNPETDIVPAE FT EMVALDRWAVGRAFAAQEEIIKSYDEYNLHEVTQRLMHFCSIEMGSFYLDVIKDRQYTA FT KKSGHAQRSCQTALYYIVEALVRWMAPIMSFTADEIWNEMPGKRDKFVFTGEWYEGLFD FT LAEGEDLNNEFWSKIQAVRASVNKLLEAARGEKVIGGSLQAEITLYADDALAAKINKLD FT NELRFVLLTSSATVKPLSEKSDSAKATELDGLFVDVAASEAAKCERCWHHVADVGTIEG FT HEEVCGRCVSNVEGEGEERKFA" FT misc_feature 637231..639120 FT /gene="ileS" FT /locus_tag="VSAL_I0580" FT /note="HMMPfam hit to PF00133, tRNA synthetases class I (I, FT L, M and V), score 0" FT /inference="protein motif:HMMPfam:PF00133" FT misc_feature 637324..637359 FT /gene="ileS" FT /locus_tag="VSAL_I0580" FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT /inference="protein motif:ProSite:PS00178" FT misc_feature 639250..639726 FT /gene="ileS" FT /locus_tag="VSAL_I0580" FT /note="HMMPfam hit to PF08264, Anticodon-binding FT domain,score 1e-54" FT /inference="protein motif:HMMPfam:PF08264" FT misc_feature 639886..639975 FT /gene="ileS" FT /locus_tag="VSAL_I0580" FT /note="HMMPfam hit to PF06827, Zinc finger found in FPG and FT IleRS, score 8.8e-10" FT /inference="protein motif:HMMPfam:PF06827" FT CDS 640011..640526 FT /transl_table=11 FT /gene="lspA" FT /locus_tag="VSAL_I0581" FT /old_locus_tag="TVS0419" FT /product="lipoprotein signal peptidase" FT /EC_number="3.4.23.36" FT /db_xref="GOA:B6EMY7" FT /db_xref="InterPro:IPR001872" FT /db_xref="UniProtKB/TrEMBL:B6EMY7" FT /protein_id="CAQ78266.1" FT /translation="MTSDNKTLPLLKESGLRWLWLAGLVFMADISIKLFVMKEMTYGWA FT NRIEVLPFFNFLYAHNYGAAFSFLSDQAGWQRWFFTGIAIVVCGLLAYWMRKAPQTDKL FT NNIAYALIIGGAIGNVFDRLVHGFVVDYLDFYWGSYHWPTFNLADAAICIGAGLIILDG FT FRSNKKEQ" FT misc_feature order(640053..640121,640158..640217,640227..640295, FT 640329..640397,640425..640493) FT /gene="lspA" FT /locus_tag="VSAL_I0581" FT misc_feature 640056..640523 FT /gene="lspA" FT /locus_tag="VSAL_I0581" FT /note="HMMPfam hit to PF01252, Signal peptidase (SPase) II, FT score 2.7e-69" FT /inference="protein motif:HMMPfam:PF01252" FT misc_feature 640350..640382 FT /gene="lspA" FT /locus_tag="VSAL_I0581" FT /note="PS00855 Signal peptidases II signature." FT /inference="protein motif:ProSite:PS00855" FT CDS 640621..641052 FT /transl_table=11 FT /gene="fkpB" FT /locus_tag="VSAL_I0582" FT /old_locus_tag="TVS0420" FT /product="FkbP-type 16 kDa peptidyl-prolyl cis-trans FT isomerase" FT /EC_number="5.2.1.8" FT /db_xref="GOA:B6ENC6" FT /db_xref="InterPro:IPR001179" FT /db_xref="InterPro:IPR023566" FT /db_xref="UniProtKB/TrEMBL:B6ENC6" FT /protein_id="CAQ78267.1" FT /translation="MSKIESNSEVTLHFTIKLKDGSIADSTQTSGKAAKFTMGDGSLSE FT NFEQCLLGLEANQSKSIELNTVDAFGLPNPDNIHHMDRNRFVGDAAAEVGTIMAFTGPD FT GVDIPGIITDIAGDSVTVDFNHPLSGQDVIFDVEIVAVG" FT misc_feature 640624..641040 FT /gene="fkpB" FT /locus_tag="VSAL_I0582" FT /note="HMMPfam hit to PF00254, FKBP-type peptidyl-prolyl FT cis-trans isomeras, score 0.00067" FT /inference="protein motif:HMMPfam:PF00254" FT CDS 641077..642021 FT /transl_table=11 FT /gene="ispH" FT /locus_tag="VSAL_I0583" FT /old_locus_tag="TVS0421" FT /product="4-hydroxy-3-methylbut-2-enyl diphosphate FT reductase" FT /EC_number="1.17.1.2" FT /db_xref="GOA:B6ENC7" FT /db_xref="InterPro:IPR003451" FT /db_xref="UniProtKB/Swiss-Prot:B6ENC7" FT /protein_id="CAQ78268.1" FT /translation="MKIVLANPRGFCAGVDRAISIVERALELYKAPIYVRHEVVHNRFV FT VEGLKQRGAIFVEELSEVPDDNIVIFSAHGVSQAVRTEAKERALTVFDATCPLVTKVHM FT EVARASKKSIEVVLIGHAGHPEVEGTMGQYASEAGGMYLVETPEDVEKLIVQDPNNLHY FT VSQTTLSVDETADVIDELRRVFPKIQGPRKDDICYATQNRQDAVRDMAGQVDVMIVVGS FT KNSSNSNRLRELSEKLGTTSYLIDCPEELKEEWLTNQAKVGVTAGASAPEELVNQIIEQ FT VKVFGGTTVDELKGREENMFFEVPKELQIKTVS" FT misc_feature 641083..641931 FT /gene="ispH" FT /locus_tag="VSAL_I0583" FT /note="HMMPfam hit to PF02401, LytB protein, score FT 2.1e-164" FT /inference="protein motif:HMMPfam:PF02401" FT CDS 642091..642900 FT /transl_table=11 FT /gene="dapB" FT /locus_tag="VSAL_I0584" FT /old_locus_tag="TVS0422" FT /product="dihydrodipicolinate reductase" FT /EC_number="1.3.1.26" FT /db_xref="GOA:B6ENC8" FT /db_xref="InterPro:IPR000846" FT /db_xref="InterPro:IPR011770" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR022663" FT /db_xref="InterPro:IPR022664" FT /db_xref="InterPro:IPR023940" FT /db_xref="UniProtKB/Swiss-Prot:B6ENC8" FT /protein_id="CAQ78269.1" FT /translation="MVRVAIAGAAGRMGRNLIKAVNGSQYAVLAAASEHPESSLIGVDV FT GEMAGLGKSGIVIVDDLAKAVDDFDVIIDFTLPISTLKNIELCQEHNKAIVIGTTGFSE FT PGKELIDQAAKEIPIVMAPNYSVGVNVVFKLLEKAAKIMGDYCDIEIIEAHHRYKVDAP FT SGTAIGMGEAIAGAMGNKLDDVAVYTREGITGERTKNEIGFATIRAGDIVGEHTAMFAD FT IGERVEITHKATDRMTFANGAVRASHWLHQKSPGFYTMHDVLDLDQI" FT misc_feature 642094..642465 FT /gene="dapB" FT /locus_tag="VSAL_I0584" FT /note="HMMPfam hit to PF01113, Dihydrodipicolinate FT reductase, N-terminus, score 2.5e-57" FT /inference="protein motif:HMMPfam:PF01113" FT misc_feature 642472..642885 FT /gene="dapB" FT /locus_tag="VSAL_I0584" FT /note="HMMPfam hit to PF05173, Dihydrodipicolinate FT reductase, C-terminus, score 1.1e-78" FT /inference="protein motif:HMMPfam:PF05173" FT misc_feature 642538..642591 FT /gene="dapB" FT /locus_tag="VSAL_I0584" FT /note="PS01298 Dihydrodipicolinate reductase signature." FT /inference="protein motif:ProSite:PS01298" FT CDS 643459..644613 FT /transl_table=11 FT /gene="carA" FT /locus_tag="VSAL_I0585" FT /old_locus_tag="TVS0423" FT /product="carbamoyl-phosphate synthase small chain" FT /EC_number="6.3.5.5" FT /db_xref="GOA:B6ENC9" FT /db_xref="InterPro:IPR002474" FT /db_xref="InterPro:IPR006274" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/TrEMBL:B6ENC9" FT /protein_id="CAQ78270.1" FT /translation="MSKSALLVLEDGTVFRGQSIGADGSAVGEVVFNTSMTGYQEILTD FT PSYSQQIVTLTYPHIGNTGINSEDEESSSIHAQGLVIRDLPLLASNFRSEQTLSEYLKS FT QNIVGIADIDTRKLTRILREKGAQNGCIIACSSKKESNLDEAFALAQAKAFPGLKGMDL FT AKEVTTSEAYQWKQGSWTLTGGLPEEKADSELPFHVVAYDFGAKRNILRMLVDRGCRLT FT VVPAQTSAEEVLAMNPDGVFLSNGPGDPAPCTYAIEATKVFLDKGLPIFGICLGHQILA FT LASGAQTIKMKFGHHGANHPVKDLDRDVVMITAQNHGFAADEETLPANLRATHKSLFDG FT TLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFNHFIELIQQHKA" FT misc_feature 643465..643926 FT /gene="carA" FT /locus_tag="VSAL_I0585" FT /note="HMMPfam hit to PF00988, Carbamoyl-phosphate synthase FT small ch, score 8e-94" FT /inference="protein motif:HMMPfam:PF00988" FT misc_feature 644056..644592 FT /gene="carA" FT /locus_tag="VSAL_I0585" FT /note="HMMPfam hit to PF00117, Glutamine amidotransferase FT class-I, score 2e-70" FT /inference="protein motif:HMMPfam:PF00117" FT misc_feature 644263..644298 FT /gene="carA" FT /locus_tag="VSAL_I0585" FT /note="PS00442 Glutamine amidotransferases class-I active FT site." FT /inference="protein motif:ProSite:PS00442" FT CDS 644631..647861 FT /transl_table=11 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT /old_locus_tag="TVS0424" FT /product="carbamoyl-phosphate synthase large chain" FT /EC_number="6.3.5.5" FT /db_xref="GOA:B6END0" FT /db_xref="InterPro:IPR005479" FT /db_xref="InterPro:IPR005480" FT /db_xref="InterPro:IPR005481" FT /db_xref="InterPro:IPR005483" FT /db_xref="InterPro:IPR006275" FT /db_xref="InterPro:IPR011607" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="UniProtKB/TrEMBL:B6END0" FT /protein_id="CAQ78271.1" FT /translation="MPKRTDIKSVLILGAGPIVIGQACEFDYSGAQACKALREEGYRVI FT LVNSNPATIMTDPDMADATYIEPIHWEVVRNIIEKERPDAVLPTMGGQTALNCALDLER FT HGVLAEFGVEMIGATADAIDKAEDRSRFDKAMKSIGLECPNADTAKTMEEAYKVLDMVG FT FPCIIRPSFTMGGTGGGIAYNKEEFEEICRGGLDLSPTNELLIDESLIGWKEYEMEVVR FT DKNDNCIIVCTIENFDAMGIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGG FT SNVQFGINPKDGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAIGYTLDELMNDIT FT GGATPASFEPTIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKAL FT RGLEVGADGFDEMVDLDAPDALTKIRHELKDAGAERIWYIADAFRAGMSIDGVFNLTNV FT DRWFLVQIEDLVKMEAEVKAGGFASLTADSLRQLKRKGFADARLSKLLGVAESEIRRLR FT DQYDIHPVYKRVDTCAAEFSSDTAYMYSTYDEECESNPTDNDKIMILGGGPNRIGQGIE FT FDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLAIVRIEKPK FT GVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQVAVDRLGLLQPENATV FT TAMEQAIEKSREIGFPLVVRPSYVLGGRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDS FT FLDDAIEVDVDAICDGEQVVIAGIMEHIEQAGVHSGDSACSLPAYTLSEEIQDVMRDQV FT RKLAFELGVRGLMNTQFAVKNNEVYLIEVNPRAARTIPFVSKATGAPIAKIAARVMAGQ FT SLESQGFTKEIIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGNTFAEAFAKA FT ELGCSKEYPEGGRALLSVRDGDKKRVVDLAKHLVKIGYQLDATHGTAVILGEAGINPRL FT VNKVHEGRPHILDRIKNGEYTYIVNTASGRQAIEDSKLLRRGALAGKVNYTTTLNAAFA FT SCLAHEADDRNTINSLQELHARVAAKYA" FT sig_peptide 644631..644699 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT misc_feature 644646..645008 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthase FT L chain,, score 9.5e-62" FT /inference="protein motif:HMMPfam:PF00289" FT misc_feature 645012..645722 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase FT L chain,, score 1.2e-130" FT /inference="protein motif:HMMPfam:PF02786" FT misc_feature 645120..645164 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT /note="PS00866 Carbamoyl-phosphate synthase subdomain FT signature 1." FT /inference="protein motif:ProSite:PS00866" FT misc_feature 645519..645542 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT /note="PS00867 Carbamoyl-phosphate synthase subdomain FT signature 2." FT /inference="protein motif:ProSite:PS00867" FT misc_feature 645900..646271 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT /note="HMMPfam hit to PF02787, Carbamoyl-phosphate FT synthetase large c, score 4.6e-66" FT /inference="protein motif:HMMPfam:PF02787" FT misc_feature 646299..646643 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT /note="HMMPfam hit to PF00289, Carbamoyl-phosphate synthase FT L chain,, score 1e-27" FT /inference="protein motif:HMMPfam:PF00289" FT misc_feature 646647..647279 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT /note="HMMPfam hit to PF02786, Carbamoyl-phosphate synthase FT L chain,, score 2.7e-25" FT /inference="protein motif:HMMPfam:PF02786" FT misc_feature 646755..646799 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT /note="PS00866 Carbamoyl-phosphate synthase subdomain FT signature 1." FT /inference="protein motif:ProSite:PS00866" FT misc_feature 647142..647165 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT /note="PS00867 Carbamoyl-phosphate synthase subdomain FT signature 2." FT /inference="protein motif:ProSite:PS00867" FT misc_feature 647493..647753 FT /gene="carB" FT /locus_tag="VSAL_I0586" FT /note="HMMPfam hit to PF02142, MGS-like domain, score FT 1.4e-27" FT /inference="protein motif:HMMPfam:PF02142" FT CDS complement(647963..649372) FT /transl_table=11 FT /gene="dacB" FT /locus_tag="VSAL_I0587" FT /old_locus_tag="TVS0425" FT /product="penicillin-binding protein 4 precursor" FT /EC_number="3.4.-.-" FT /db_xref="GOA:B6END1" FT /db_xref="InterPro:IPR000667" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:B6END1" FT /protein_id="CAQ78272.1" FT /translation="MPLSRLFILSLSLYSFSTFASIPSSIQLLPSGSRAAIVVESLHDQ FT SIEFQQKENELLPPASTLKVATALASRLALGKNFQFKTTLHKTKHNSVQLTFSGDPSLT FT RENLSSLFKNSGLKNIKGDLWVDDSIFTGYERAVGWPWDILGVCYSAPSSALSIDENCV FT QASISTNENGTTRVFVPIHQPISFTTAARTVSAKEKKNSFCDLELTTQGNNYHLSGCLV FT ARSKPLPLKFAVQNTTEFTEQTLLRILNEQNINLSGKIIFGNSTGKIQKTVLLASHQSE FT PLMVLLNHMLKKSDNHYADNLVKTLGHYHYQQPGSFSNGTAAVKDILLKQANVDLTNAV FT IVDGSGLSRNNRMTANQMKSLLQFVYRYDKELGLIALLPTSGIDGTLIYRNSMRKEPIK FT GSIKSKSGSLFGSYNMAGFVGLEGNNPQLFVQFVADYHPIAAEEGVLPVERPIDSFEKA FT FYQALIKLSND" FT misc_feature complement(648071..649198) FT /gene="dacB" FT /locus_tag="VSAL_I0587" FT /note="HMMPfam hit to PF02113, D-Ala-D-Ala carboxypeptidase FT 3 (S13) fa, score 2.3e-75" FT /inference="protein motif:HMMPfam:PF02113" FT sig_peptide complement(649313..649372) FT /gene="dacB" FT /locus_tag="VSAL_I0587" FT CDS complement(649514..650515) FT /transl_table=11 FT /gene="ompU" FT /locus_tag="VSAL_I0588" FT /old_locus_tag="TVS0426" FT /product="major outer membrane protein OmpU" FT /note="In Vibrio anguillarum OmpU limits the progression of FT biofilm formation outside of the fish host." FT /db_xref="InterPro:IPR001702" FT /db_xref="InterPro:IPR017690" FT /db_xref="InterPro:IPR023614" FT /db_xref="UniProtKB/TrEMBL:B6END2" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ78273.1" FT /translation="MNKNVLALAVAAIMSTGAVNAAEIYKGADQTLEMGGRAEARLSMK FT DGKAEDASRIRLNVKGTTQISDGLYGVGFWEGEFTTAENGGVDGNSNLDSRYAYAGMGG FT NFGEVTYGKNDGALGVITDFTDIMAYAGNTAAAKIAVADRTDNNLGYKGTFGDFSAKAN FT YRFADRTENLAGTEYKDNGQDGYALSGIYAFGDSGFKLGAGYADQAEQNEVMLAGSYTM FT DNLYFAGTFTNGELAEKNADYTGYEAAVAYTMGKTVFTSTYNNAETNDETSADNFAVDA FT TYFFNANFRTYISYNFNLISEGDKLGTAGVSNAKASDVDAENELALGMRYDF" FT misc_feature complement(649517..650440) FT /gene="ompU" FT /locus_tag="VSAL_I0588" FT /note="HMMPfam hit to PF00267, Gram-negative porin, score FT 4.5e-09" FT /inference="protein motif:HMMPfam:PF00267" FT misc_feature complement(649796..649843) FT /gene="ompU" FT /locus_tag="VSAL_I0588" FT /note="PS00453 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 1." FT /inference="protein motif:ProSite:PS00453" FT sig_peptide complement(650453..650515) FT /gene="ompU" FT /locus_tag="VSAL_I0588" FT misc_feature 651095..651316 FT /gene="greA" FT /locus_tag="VSAL_I0589" FT /note="HMMPfam hit to PF03449, Prokaryotic transcription FT elongation fact, score 8.7e-30" FT /inference="protein motif:HMMPfam:PF03449" FT CDS 651098..651571 FT /transl_table=11 FT /gene="greA" FT /locus_tag="VSAL_I0589" FT /old_locus_tag="TVS0428" FT /product="transcription elongation factor GreA" FT /db_xref="GOA:B6END3" FT /db_xref="InterPro:IPR001437" FT /db_xref="InterPro:IPR006359" FT /db_xref="InterPro:IPR018151" FT /db_xref="InterPro:IPR022691" FT /db_xref="InterPro:IPR023459" FT /db_xref="UniProtKB/TrEMBL:B6END3" FT /protein_id="CAQ78274.1" FT /translation="MDKVPMTIRGEKLLRDELEVLLKRRPVISKAIGEARELGDLKENA FT EYHAAREDQGICEAQIRDIEYKLSVAQVIDVTKMTNTGKVIFGATVTLLDVDTEDKVKY FT QIVADDEANIKEGRISVNSPIARGLIGKLVEDEVSIRTPGGTKEFEIDAVEYI" FT misc_feature 651116..651238 FT /gene="greA" FT /locus_tag="VSAL_I0589" FT /note="PS00829 Prokaryotic transcription elongation factors FT signature 1." FT /inference="protein motif:ProSite:PS00829" FT misc_feature 651332..651565 FT /gene="greA" FT /locus_tag="VSAL_I0589" FT /note="HMMPfam hit to PF01272, Prokaryotic transcription FT elongation fact, score 1.1e-37" FT /inference="protein motif:HMMPfam:PF01272" FT CDS complement(651666..651962) FT /transl_table=11 FT /locus_tag="VSAL_I0590" FT /old_locus_tag="TVS0429" FT /product="putative RNA-binding protein" FT /db_xref="GOA:B6END4" FT /db_xref="InterPro:IPR001890" FT /db_xref="InterPro:IPR017924" FT /db_xref="UniProtKB/TrEMBL:B6END4" FT /protein_id="CAQ78275.1" FT /translation="MNLSTKQKQHLKGLAHYLKPVVMMGSNGLTEAVVAEIEIALNHHE FT LIKVKIASEDRDTKQLIVDAIIRETEAEKVQVIGKTLVLYRASEARKIEIPRK" FT misc_feature complement(651705..651956) FT /locus_tag="VSAL_I0590" FT /note="HMMPfam hit to PF01985, CRS1 / YhbY domain, score FT 4.5e-33" FT /inference="protein motif:HMMPfam:PF01985" FT CDS 652081..652710 FT /transl_table=11 FT /gene="rrmJ" FT /locus_tag="VSAL_I0591" FT /old_locus_tag="TVS0430" FT /product="ribosomal RNA large subunit methyltransferase J FT (cell division protein FtsJ)" FT /EC_number="2.1.1.-" FT /db_xref="GOA:B6END5" FT /db_xref="InterPro:IPR002877" FT /db_xref="InterPro:IPR015507" FT /db_xref="UniProtKB/Swiss-Prot:B6END5" FT /protein_id="CAQ78276.1" FT /translation="MSKNKLSASSGRWLKEHFDDKYVLEAQKRGYRSRAIFKLEEIQNK FT DKLLKPGMTVVDLGAAPGGWSQYAVEQVGDSGQVIACDILAMDSIAGVSFLQGDFREEA FT VLDALLERIQPDMVDVVMSDMAPNMSGNPSVDQPRSMYLVELALDMCRQVLAPNGSFTV FT KVFQGESFDAYLQEVRKVFKVVKIRKPDSSRARSREVYIVATGYKG" FT misc_feature 652171..652707 FT /gene="rrmJ" FT /locus_tag="VSAL_I0591" FT /note="HMMPfam hit to PF01728, FtsJ-like methyltransferase, FT score 2.2e-79" FT /inference="protein motif:HMMPfam:PF01728" FT CDS 652796..654778 FT /transl_table=11 FT /gene="hflB" FT /locus_tag="VSAL_I0592" FT /old_locus_tag="TVS0432" FT /product="cell division protein FtsH" FT /EC_number="3.4.24.-" FT /db_xref="GOA:B6END6" FT /db_xref="InterPro:IPR000642" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR003960" FT /db_xref="InterPro:IPR005936" FT /db_xref="InterPro:IPR011546" FT /db_xref="UniProtKB/TrEMBL:B6END6" FT /protein_id="CAQ78277.1" FT /translation="MAKNLILWLVIAVVLMSVFQSFGPSDSSGRSVDYTTFVKEVGNSQ FT VQEATFNNREIKVTKSDGTRYVTYMPVYQDPKLLDDLINQNVIVKGTPPEEQSLLESIF FT ISWFPMILLIGVWIFFMRQMQGGGGKGAMSFGKSKAKMMTEEQINTTFDDVAGCDEAKE FT DVKELVDYLREPSRFQKLGGKIPTGVLLVGPPGTGKTLIAKAIAGEAKVPFFSISGSDF FT VEMFVGVGASRVRDMFEQAKKSSPCIIFIDEIDAVGRQRGAGVGGGNDEREQTLNQMLV FT EMDGFEGNEGVIVVAATNRPDVLDAALLRPGRFDRQVVVGLPDIRGREQILQVHMRKVP FT LGSGVEPSLIARGTPGFSGADLANLVNEAALFAARTNKRVVSMVEFELAKDKIMMGAER FT KSMVMTEETKTSTAYHEAGHAIVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVSM FT NRQHLESMISSLYGGRLAEELIYGVDKVSTGASNDIERATDIARKMVTQWGFSESLGPL FT LYAEDQGDPFSGHGSSHQSKHVSPETLRLIDAEIRTIIDRNYARTRQILEDNMDLLHSM FT KDALMTFETIDAGQIDDLMERKTEIREPQGWGDDNQTKPEEKNEKPAEADVEIKTEESK FT VEESTEEEKPQVAEETKKDSDSSEK" FT sig_peptide 652796..652864 FT /gene="hflB" FT /locus_tag="VSAL_I0592" FT misc_feature order(652808..652867,653090..653158) FT /gene="hflB" FT /locus_tag="VSAL_I0592" FT misc_feature 652883..653281 FT /gene="hflB" FT /locus_tag="VSAL_I0592" FT /note="HMMPfam hit to PF06480, FtsH Extracellular, score FT 5e-44" FT /inference="protein motif:HMMPfam:PF06480" FT misc_feature 653186..653209 FT /gene="hflB" FT /locus_tag="VSAL_I0592" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 653357..653920 FT /gene="hflB" FT /locus_tag="VSAL_I0592" FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various c, score 2.4e-98" FT /inference="protein motif:HMMPfam:PF00004" FT misc_feature 653357..653761 FT /gene="hflB" FT /locus_tag="VSAL_I0592" FT /note="HMMPfam hit to PF07728, ATPase family associated FT with various c, score 0.00027" FT /inference="protein motif:HMMPfam:PF07728" FT misc_feature 653372..653395 FT /gene="hflB" FT /locus_tag="VSAL_I0592" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 653669..653725 FT /gene="hflB" FT /locus_tag="VSAL_I0592" FT /note="PS00674 AAA-protein family signature." FT /inference="protein motif:ProSite:PS00674" FT misc_feature 653936..654577 FT /gene="hflB" FT /locus_tag="VSAL_I0592" FT /note="HMMPfam hit to PF01434, Peptidase family M41, score FT 1.3e-117" FT /inference="protein motif:HMMPfam:PF01434" FT CDS 654843..655676 FT /transl_table=11 FT /gene="folP" FT /locus_tag="VSAL_I0593" FT /old_locus_tag="TVS0433" FT /product="dihydropteroate synthase" FT /EC_number="2.5.1.15" FT /db_xref="GOA:B6END7" FT /db_xref="InterPro:IPR000489" FT /db_xref="InterPro:IPR006390" FT /db_xref="InterPro:IPR011005" FT /db_xref="UniProtKB/TrEMBL:B6END7" FT /protein_id="CAQ78278.1" FT /translation="MKLISKEKTLILDRSHVMGILNVTPDSFSDGGKFTDLEAALRQVE FT KMVNAGVSFIDIGGESTRPGAPEVGVQQELDRVIPIIEAIHQRFDTWISIDTSKAVVMD FT EAVKFGADLINDVRALQEPNALEVAAKANVPICLMHMQGQPRTMQSNPTYENVFSDVSL FT FLEERIAACQSIGITKDKLILDPGFGFGKSLAHNYQLLTELERFHQFGLPILAGMSRKS FT MIFKLLDIEPQEAISGSLACATIAAMKGAQIIRVHDFEQTMDIVKVCQATLEQAS" FT misc_feature 654891..654938 FT /gene="folP" FT /locus_tag="VSAL_I0593" FT /note="PS00792 Dihydropteroate synthase signature 1." FT /inference="protein motif:ProSite:PS00792" FT misc_feature 654900..655526 FT /gene="folP" FT /locus_tag="VSAL_I0593" FT /note="HMMPfam hit to PF00809, Pterin binding enzyme,score FT 7.5e-98" FT /inference="protein motif:HMMPfam:PF00809" FT CDS 655733..657070 FT /transl_table=11 FT /gene="glmM" FT /locus_tag="VSAL_I0594" FT /old_locus_tag="TVS0434" FT /product="phosphoglucosamine mutase" FT /EC_number="5.4.2.10" FT /db_xref="GOA:B6END8" FT /db_xref="InterPro:IPR005841" FT /db_xref="InterPro:IPR005843" FT /db_xref="InterPro:IPR005844" FT /db_xref="InterPro:IPR005845" FT /db_xref="InterPro:IPR005846" FT /db_xref="InterPro:IPR006352" FT /db_xref="InterPro:IPR016055" FT /db_xref="InterPro:IPR016066" FT /db_xref="UniProtKB/Swiss-Prot:B6END8" FT /protein_id="CAQ78279.1" FT /translation="MAERKYFGTDGVRGLVGQSPITPEFVMKLGWAAGKVLAKQGTKKV FT IIGKDTRISGYMLESALEAGLAAAGLKAKFTGPMPTPAVAYLTQTFRAEAGIVISASHN FT PYYDNGIKFFSSEGTKLPDDVEMAIEAELDKPMTCVESALLGKASRLNDAAGRYIEFCK FT STFPKELSLAGVKMVVDCAHGATYHIAPNVFKELGAEIITIGCEPNGTNINHEVGATDV FT RALQAKVLEEKADFGVAFDGDGDRIIMVDDLGNKVDGDQIAYIIARDALRRGELKGGVV FT GTLMTNMGMEVALRNLGIPFVRSNVGDRYVMEKLLENNWKIGAENSGHVILLDKVTTGD FT AIVAALQVIASIVGSKMSLKELCNGMTLFPQVLENIRFVGDNNPLDTELVKAAQADVET FT KLGDNGRVLLRKSGTEPLIRVMVEGENAELVQQYALQIVDAVKESC" FT misc_feature 655742..656152 FT /gene="glmM" FT /locus_tag="VSAL_I0594" FT /note="HMMPfam hit to FT PF02878,Phosphoglucomutase/phosphomannomutase, al, score FT 1.1e-58" FT /inference="protein motif:HMMPfam:PF02878" FT misc_feature 656018..656062 FT /gene="glmM" FT /locus_tag="VSAL_I0594" FT /note="PS00710 Phosphoglucomutase and phosphomannomutase FT phosphoserine signature." FT /inference="protein motif:ProSite:PS00710" FT misc_feature 656198..656500 FT /gene="glmM" FT /locus_tag="VSAL_I0594" FT /note="HMMPfam hit to FT PF02879,Phosphoglucomutase/phosphomannomutase, al, score FT 2.5e-46" FT /inference="protein motif:HMMPfam:PF02879" FT misc_feature 656504..656839 FT /gene="glmM" FT /locus_tag="VSAL_I0594" FT /note="HMMPfam hit to FT PF02880,Phosphoglucomutase/phosphomannomutase, al, score FT 1.1e-31" FT /inference="protein motif:HMMPfam:PF02880" FT misc_feature 656849..657061 FT /gene="glmM" FT /locus_tag="VSAL_I0594" FT /note="HMMPfam hit to FT PF00408,Phosphoglucomutase/phosphomannomutase, C-, score FT 4.5e-10" FT /inference="protein motif:HMMPfam:PF00408" FT CDS 657222..657554 FT /transl_table=11 FT /gene="secG" FT /locus_tag="VSAL_I0595" FT /old_locus_tag="TVS0435" FT /product="protein-export membrane protein SecG (preprotein FT translocase band subunit)" FT /db_xref="GOA:B6END9" FT /db_xref="InterPro:IPR004692" FT /db_xref="UniProtKB/TrEMBL:B6END9" FT /protein_id="CAQ78280.1" FT /translation="MHTILLVIYLIAAVGVIGLVLVQHGKGADMGASFGAGASNTVFGS FT GGSGNFLTRMTAICATVFFIISLALGNMSTHKSEGFDLKLDQQATEQVTDNVSDVPATE FT NSDVPL" FT sig_peptide 657222..657335 FT /gene="secG" FT /locus_tag="VSAL_I0595" FT misc_feature 657225..657446 FT /gene="secG" FT /locus_tag="VSAL_I0595" FT /note="HMMPfam hit to PF03840, Preprotein translocase SecG FT subunit, score 2.1e-34" FT /inference="protein motif:HMMPfam:PF03840" FT misc_feature order(657234..657287,657372..657440) FT /gene="secG" FT /locus_tag="VSAL_I0595" FT tRNA 657564..657645 FT /locus_tag="VSAL_I3125t" FT /product="transfer RNA-Leu" FT tRNA 657719..657792 FT /locus_tag="VSAL_I3126t" FT /product="transfer RNA-Met" FT CDS 657962..658417 FT /transl_table=11 FT /locus_tag="VSAL_I0596" FT /old_locus_tag="TVS0436" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6ENE0" FT /db_xref="InterPro:IPR003728" FT /db_xref="UniProtKB/Swiss-Prot:B6ENE0" FT /protein_id="CAQ78281.1" FT /translation="MTGLERQLTEMLEAPVGALGYELVGLEFIRAGEHSTLRVFIDHEN FT GIFVEDCAEASRQISAVMDVEDPITVAYNLEVSSPGLERPLFKAAHYQQFVGHEVSLVL FT KMPMNNRRKWKGDILDINGEIVTVTVDGNNEEFALSNISKANLVPKF" FT misc_feature 657992..658402 FT /locus_tag="VSAL_I0596" FT /note="HMMPfam hit to PF02576, Uncharacterised BCR, YhbC FT family COG0779, score 1.3e-66" FT /inference="protein motif:HMMPfam:PF02576" FT CDS 658434..659921 FT /transl_table=11 FT /gene="nusA" FT /locus_tag="VSAL_I0597" FT /old_locus_tag="TVS0437" FT /product="transcription elongation protein NusA" FT /db_xref="GOA:B6ENE1" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR004087" FT /db_xref="InterPro:IPR004088" FT /db_xref="InterPro:IPR009019" FT /db_xref="InterPro:IPR010213" FT /db_xref="InterPro:IPR010214" FT /db_xref="InterPro:IPR010995" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013735" FT /db_xref="InterPro:IPR015946" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR022967" FT /db_xref="UniProtKB/TrEMBL:B6ENE1" FT /protein_id="CAQ78282.1" FT /translation="MNKEILAVVEAVSNEKAVPRERIFEALEIALATATKKKSALEIEV FT RVAIDRKTGAVETFRRWVAVAQVEHPTLEISIEAAQFEDETIEIGGFIEDDIESVTFDR FT ITTQTAKQVIVQKVREAERAMIVEQFIDNEGELITGIVKKVNRDAIIVDLGSNAEAVIL FT REDQLPRENFRPGDRVRGLLYAVKPEARGFQLFMTRSKGVMLTELFRVEVPEIGEELIE FT IKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSNDLGGERIDIVLWDDNPA FT QFVINSMAPAEVASIIVDEDNNTMDIAVEADNLAQAIGRSGQNVRLASQLTGWELNVMT FT VADLNKKHQEEAQGSIDAFVKHLDIDADFAQLLVEEGFTTLEEIAYVPVNELLEVEALD FT EETVDLLRTRAKEALTTLALAQEESLDGIEPAEDLLALEGLERELAFKFAAKGVITLED FT LADQGVDELSDIEDLTEERAGELIMAARNICWFSDEA" FT misc_feature 658443..658808 FT /gene="nusA" FT /locus_tag="VSAL_I0597" FT /note="HMMPfam hit to PF08529, NusA N-terminal domain,score FT 5.3e-55" FT /inference="protein motif:HMMPfam:PF08529" FT misc_feature 658824..659027 FT /gene="nusA" FT /locus_tag="VSAL_I0597" FT /note="HMMPfam hit to PF00575, S1 RNA binding domain,score FT 1.8e-09" FT /inference="protein motif:HMMPfam:PF00575" FT CDS 659945..662620 FT /transl_table=11 FT /locus_tag="VSAL_I0598" FT /old_locus_tag="TVS0438" FT /product="translation initiation factor IF-2" FT /db_xref="GOA:B6ENE2" FT /db_xref="InterPro:IPR000178" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006847" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009061" FT /db_xref="InterPro:IPR013575" FT /db_xref="InterPro:IPR015760" FT /db_xref="InterPro:IPR023115" FT /db_xref="UniProtKB/Swiss-Prot:B6ENE2" FT /protein_id="CAQ78283.1" FT /translation="MTKLTVKALSEDIGTPVDRLLQQFSDAGINKKDGDSVSEGEKQSL FT LIHLKKEHGSADESASPTRLTLQRKTRSTLSVAGSGGKSKDVQVEVRKKRTYVKASTLE FT EEKKTEQMKVEAGDKAKRDAEEAAVRELEQKAKREAEEKAKREAEAEVKVKRDAEQTAK FT RTKTEKAKKEMTTKNDQAKTEADELKLRQETEATRKAEAEAAKLVEDARKLAEENEGRW FT KEEEQKKTAAEKTADYHVTTSTHAREAEDAADRKDEQQPRRRKKKAKAAPVERGGRNQR FT GGRNRKPQVNKPTSMQHGFDKSATVAKQDVAIGETIIVSELANKMSVKATEVIKVMMKM FT GAMATINQVIDQETAALVAEEMGHKVVLRKENELEEAVLSDRDNSATVEGRAPVVTIMG FT HVDHGKTSTLDYIRRAHVADAEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTAMRAR FT GAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPLIVAVNKIDKEGANPDNVKNELAQ FT YDIIPEEWGGENMFVHISAKQGTNIEGLLEAILLQSEVLELTAVKEGMASGVVVESRLD FT KGRGPVATVLVQSGTLHKGDIVLCGQEYGRVRAMRDENGKDIDSAGPSIPVEILGLSGV FT PASGDEATVVRDERKAREVANYRQGKFRDVKLARQQKAKLENMFANMEAGEVAECNVVL FT KADVQGSVEAIADSLRKLSTDEVKVNIVGSGVGGITETDATLAAASNAILLGFNVRADT FT SARRTIENENLDLRYYSIIYQLIDEVKQAMGGMLAPEFRQEIIGLAQVREVFKSPKIGA FT VAGCMVTEGTIKRNNPIRVLRDNIVIYEGELESLRRFKDDMPEVKNGYECGIGVKNYND FT VRVGDQIEVFEIVEIQRTLD" FT misc_feature 659945..660100 FT /locus_tag="VSAL_I0598" FT /note="HMMPfam hit to PF04760, Translation initiation FT factor IF-2, N-ter, score 9.9e-05" FT /inference="protein motif:HMMPfam:PF04760" FT misc_feature 660125..660247 FT /locus_tag="VSAL_I0598" FT /note="HMMPfam hit to PF08364, Bacterial translation FT initiation factor I, score 1.2e-21" FT /inference="protein motif:HMMPfam:PF08364" FT misc_feature 660884..661039 FT /locus_tag="VSAL_I0598" FT /note="HMMPfam hit to PF04760, Translation initiation FT factor IF-2, N-ter, score 3.1e-18" FT /inference="protein motif:HMMPfam:PF04760" FT misc_feature 661112..661615 FT /locus_tag="VSAL_I0598" FT /note="HMMPfam hit to PF00009, Elongation factor Tu GTP FT binding domain, score 4.1e-54" FT /inference="protein motif:HMMPfam:PF00009" FT misc_feature 661139..661162 FT /locus_tag="VSAL_I0598" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 661682..661873 FT /locus_tag="VSAL_I0598" FT /note="HMMPfam hit to PF03144, Elongation factor Tu domain, FT score 2.5e-13" FT /inference="protein motif:HMMPfam:PF03144" FT misc_feature 662375..662581 FT /locus_tag="VSAL_I0598" FT /note="HMMPfam hit to PF03144, Elongation factor Tu domain, FT score 3.6e-10" FT /inference="protein motif:HMMPfam:PF03144" FT misc_feature 662465..662533 FT /locus_tag="VSAL_I0598" FT /note="PS01176 Initiation factor 2 signature." FT /inference="protein motif:ProSite:PS01176" FT CDS 662734..663141 FT /transl_table=11 FT /gene="rbfA" FT /locus_tag="VSAL_I0599" FT /old_locus_tag="TVS0439" FT /product="ribosome-binding factor A" FT /db_xref="GOA:B6ENE3" FT /db_xref="InterPro:IPR000238" FT /db_xref="InterPro:IPR015946" FT /db_xref="InterPro:IPR023799" FT /db_xref="UniProtKB/Swiss-Prot:B6ENE3" FT /protein_id="CAQ78284.1" FT /translation="MSKEFSRAQRVSQQLQKELAVILQREVRDSRIGMVTISDVEVSRD FT LAYAKVFVTFFCVGEQTPETCLAALKEHEVPVRMMLGKRIRHRLTPEVRFTYDNTLVEG FT MRMSNLVSDVVNTDKRKMAESGRTESDEGEE" FT misc_feature 662752..663066 FT /gene="rbfA" FT /locus_tag="VSAL_I0599" FT /note="HMMPfam hit to PF02033, Ribosome-binding factor FT A,score 1.4e-41" FT /inference="protein motif:HMMPfam:PF02033" FT CDS 663141..664097 FT /transl_table=11 FT /gene="truB" FT /locus_tag="VSAL_I0600" FT /old_locus_tag="TVS0440" FT /product="tRNA pseudouridine synthase B" FT /EC_number="5.4.99.-" FT /db_xref="GOA:B6ENE4" FT /db_xref="InterPro:IPR002501" FT /db_xref="InterPro:IPR014780" FT /db_xref="InterPro:IPR015240" FT /db_xref="InterPro:IPR015947" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/Swiss-Prot:B6ENE4" FT /protein_id="CAQ78285.1" FT /translation="MARRRKGRPIDGVILIDKPAGITSNDTLQKVKRIYFAEKAGHTGA FT LDPLATGMLPLCFGEATKFSQFLLDSDKRYRVVAKLGERTNTSDSDGEVVETREVKVDR FT GQLERCIAKFRGTTDQIPSMFSALKHEGRPLYEYAREGIEVPRKSRKITVYSIELIRFE FT GHEVEMEVHCSKGTYIRTITDDLGEMLGCGAHVTYLRRTGVSNYPYENMVTIEHLEALL FT EKAHREEISPRELLDPLLMPMDSAVQDLPEVNMITELADHVLHGQPVQVFGAPQDGIVR FT MTSGEERLFIGIGHIDDDGRVAPKRLVVFRDEIEEDK" FT misc_feature 663234..663677 FT /gene="truB" FT /locus_tag="VSAL_I0600" FT /note="HMMPfam hit to PF01509, TruB family pseudouridylate FT synthase (N term, score 6.6e-77" FT /inference="protein motif:HMMPfam:PF01509" FT misc_RNA 664197..664316 FT /locus_tag="VSAL_I3127s" FT /product="ribosomal S15 leader" FT /function="This pseoduknot structure causes translational FT regulation of the S15 protein" FT /note="Ribosomal S15 leader (RF00114) predicted by FT Rfam,score 51.30" FT CDS 664260..664529 FT /transl_table=11 FT /gene="rpsO" FT /locus_tag="VSAL_I0601" FT /old_locus_tag="TVS0441" FT /product="30S ribosomal protein S15" FT /db_xref="GOA:B6ENE5" FT /db_xref="InterPro:IPR000589" FT /db_xref="InterPro:IPR005290" FT /db_xref="InterPro:IPR009068" FT /db_xref="UniProtKB/Swiss-Prot:B6ENE5" FT /protein_id="CAQ78286.1" FT /translation="MSLNAETKAAIVAEYAQCENDTGSPEVQVALLTASINHLQGHFAN FT HKHDHHSRRGLLRMVSSRRKLLDYLKGKNSTRYQDLIKRLGLRR" FT misc_feature 664275..664523 FT /gene="rpsO" FT /locus_tag="VSAL_I0601" FT /note="HMMPfam hit to PF00312, Ribosomal protein S15,score FT 3.7e-36" FT /inference="protein motif:HMMPfam:PF00312" FT misc_feature 664374..664466 FT /gene="rpsO" FT /locus_tag="VSAL_I0601" FT /note="PS00362 Ribosomal protein S15 signature." FT /inference="protein motif:ProSite:PS00362" FT CDS 664832..666988 FT /transl_table=11 FT /gene="pnp" FT /locus_tag="VSAL_I0602" FT /old_locus_tag="TVS0442" FT /product="polyribonucleotide nucleotidyltransferase" FT /EC_number="2.7.7.8" FT /db_xref="GOA:B6ENE6" FT /db_xref="InterPro:IPR001247" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR004087" FT /db_xref="InterPro:IPR004088" FT /db_xref="InterPro:IPR012162" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR015847" FT /db_xref="InterPro:IPR015848" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018111" FT /db_xref="InterPro:IPR020568" FT /db_xref="InterPro:IPR022967" FT /db_xref="UniProtKB/Swiss-Prot:B6ENE6" FT /protein_id="CAQ78287.1" FT /translation="MCIEAKGKKMFEKPVVKSFQYGNHTVTLETGVMARQATAAVMASM FT DDTSVFVSVVAKKEAVAGQDFFPLTVNYQERTYAAGKIPGGFFKREGRPSEGETLTARL FT IDRPIRPLFPSAFKNEVQVIATVVSINPDVNPDMITMIATSAALSIAGVPFNGPIGAAR FT VGHINGELVLNPSNTELANSKLDLVVSGTEAAVLMVESEADNLSEEEMLSAVVFGHDQQ FT QVVIKAINEFAAEVATPSWNWEAPVVNAELKAQVAELAETRLSEAYQITEKMARYEQVG FT AIKSEVVAALLVQNEALDEREIRGMLGALEKNVVRSRIIAGHPRIDGREKDMVRALDVR FT TGVLPRTHGSALFTRGETQALVTATLGTQRDAQIIDSLMGEKKDHFLLHYNFPPYCVGE FT TGFVGSPKRREIGHGKLAKRGIAAVMPSVEEFPYTVRVVSEITESNGSSSMASVCGTSL FT ALMDAGVPIKASVAGIAMGLVKEGDDFVVLSDILGDEDHLGDMDFKVAGTNAGITALQM FT DIKIEGITKEIMQIALNQAQGARKHILTVMDEAISGAREDISQYAPRIHTMKISSDKIK FT DVIGKGGAVIRALCEETGTTIEIEDDGTIKIAATEGAAAKEAIRRIEEITAEVEVGKIY FT PGKVMRIVDFGAFVTVLGPKEGLVHISQIAEERIEKVADHLQVGQEVQTKVLEIDRQGR FT IRLSIKEATAELNPVAATEVKDAE" FT misc_feature 664895..665293 FT /gene="pnp" FT /locus_tag="VSAL_I0602" FT /note="HMMPfam hit to PF01138, 3' exoribonuclease FT family,domain, score 5.5e-39" FT /inference="protein motif:HMMPfam:PF01138" FT misc_feature 665300..665494 FT /gene="pnp" FT /locus_tag="VSAL_I0602" FT /note="HMMPfam hit to PF03725, 3' exoribonuclease FT family,domain, score 3.8e-15" FT /inference="protein motif:HMMPfam:PF03725" FT misc_feature 665585..665821 FT /gene="pnp" FT /locus_tag="VSAL_I0602" FT /note="HMMPfam hit to PF03726, Polyribonucleotide FT nucleotidyltransferase,, score 3.8e-35" FT /inference="protein motif:HMMPfam:PF03726" FT misc_feature 665828..666229 FT /gene="pnp" FT /locus_tag="VSAL_I0602" FT /note="HMMPfam hit to PF01138, 3' exoribonuclease FT family,domain, score 2.6e-51" FT /inference="protein motif:HMMPfam:PF01138" FT misc_feature 666236..666448 FT /gene="pnp" FT /locus_tag="VSAL_I0602" FT /note="HMMPfam hit to PF03725, 3' exoribonuclease FT family,domain, score 6.1e-21" FT /inference="protein motif:HMMPfam:PF03725" FT misc_feature 666524..666697 FT /gene="pnp" FT /locus_tag="VSAL_I0602" FT /note="HMMPfam hit to PF00013, KH domain, score 7.8e-16" FT /inference="protein motif:HMMPfam:PF00013" FT misc_feature 666713..666931 FT /gene="pnp" FT /locus_tag="VSAL_I0602" FT /note="HMMPfam hit to PF00575, S1 RNA binding domain,score FT 6.1e-21" FT /inference="protein motif:HMMPfam:PF00575" FT CDS 667099..668082 FT /transl_table=11 FT /gene="nlpI" FT /locus_tag="VSAL_I0603" FT /old_locus_tag="TVS0443" FT /product="lipoprotein NlpI precursor" FT /function="May be involved in cell division" FT /note="CDS is extended at the C-terminus in comparison to FT orthologues" FT /db_xref="GOA:B6ENE7" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="InterPro:IPR023605" FT /db_xref="UniProtKB/TrEMBL:B6ENE7" FT /protein_id="CAQ78288.1" FT /translation="MNWIRITLVSAVLILSGCASTKDSSSWMYPPMAVPLQPSIQQEIQ FT LSRLNQLLLRTDIDDVTRAKMFYDRGLINDSLGLRDLARVDFTQSLNLKPDQSDVFNIL FT GVYYTQNTDFDGAYEAFDSALELDPSNQFAERNLAIALYYGERYDQAYEIAKKHYNDAQ FT SDPYRAIWLYWIGLNVDATAATEAFKIQYQERTDEDFGWDLAGVILKETSDDAFFQKIL FT TTTRNNTALAQKLTEGYFYLGKRYQYEGDYPTAIALYKLAMSNNVYEFVEHRYSFIELG FT NIFKTLRELQEQKQKEQQALEVKEKQNSPEQDSVEKEELKKEATTK" FT sig_peptide 667099..667161 FT /gene="nlpI" FT /locus_tag="VSAL_I0603" FT misc_feature 667120..667152 FT /gene="nlpI" FT /locus_tag="VSAL_I0603" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 667288..667389 FT /gene="nlpI" FT /locus_tag="VSAL_I0603" FT /note="HMMPfam hit to PF00515, Tetratricopeptide FT repeat,score 0.034" FT /inference="protein motif:HMMPfam:PF00515" FT misc_feature 667390..667491 FT /gene="nlpI" FT /locus_tag="VSAL_I0603" FT /note="HMMPfam hit to PF00515, Tetratricopeptide FT repeat,score 8.8e-05" FT /inference="protein motif:HMMPfam:PF00515" FT CDS complement(668165..669043) FT /transl_table=11 FT /locus_tag="VSAL_I0604" FT /old_locus_tag="TVS0444" FT /product="putative peptidase" FT /db_xref="GOA:B6ENE8" FT /db_xref="InterPro:IPR001539" FT /db_xref="UniProtKB/TrEMBL:B6ENE8" FT /protein_id="CAQ78289.1" FT /translation="MKYALGPLLYFWSKDNIEQFYQQASNSQADIIYLGESVCSKRREI FT KPKDWFSIAKDLSSSGKQVVLSTMALLEAPSEVNAMKKYIDNGDFIIEANDVSAIQLAS FT ESKVPFVVGPAVNCYNAQTLNLFLKQGMTRWCMPVELSREWLNNVLIQCDELGIKGKFE FT TEVFSYGYLPLAYSARCFTARAENKPKDECETCCIKYPNGITVNSQEGQEVFTLNGIQT FT QSGYCYNLINDLPSMIDLVDVVRLSPLSVDTFDEINKFKLNEKGIEKYQLNDSRHCNGY FT WHNIAGLAVQM" FT misc_feature complement(668180..668812) FT /locus_tag="VSAL_I0604" FT /note="HMMPfam hit to PF01136, Peptidase family U32, score FT 1.3e-08" FT /inference="protein motif:HMMPfam:PF01136" FT CDS complement(669053..670054) FT /transl_table=11 FT /locus_tag="VSAL_I0605" FT /old_locus_tag="TVS0445" FT /product="putative peptidase" FT /db_xref="GOA:B6ENE9" FT /db_xref="InterPro:IPR001539" FT /db_xref="UniProtKB/TrEMBL:B6ENE9" FT /protein_id="CAQ78290.1" FT /translation="MELLCPAGNLPALKTAIDCGADAVYIGFKDDTNARHFAGLNFTGK FT KLEKAVQYVHDNNKHIHVALNTFAHPDGFNRWTKAVDNAAAMGIDALIISDIGVLEYAA FT NTYPELELHLSVQASATNVAAIDFYKKNFNIKRVVLPRVLSIHQVKQLSRNLTSDVDLE FT VFAFGSLCIMSEGRCYLSSYMTGESPNTVGACSPAKYVRWQETENGLESRLNNILIDRY FT GEGENAGYPTLCKGRFDVQGKTFHALEEPTSLNTLSLVPELFSANVASVKIEGRQRSPA FT YVEQVTRTWRAAIDRYKANPEGYSVEPQWDATLANVSEGTQTTLGAYHKKWQ" FT misc_feature complement(669056..669835) FT /locus_tag="VSAL_I0605" FT /note="HMMPfam hit to PF01136, Peptidase family U32, score FT 7.5e-117" FT /inference="protein motif:HMMPfam:PF01136" FT misc_feature complement(669512..669568) FT /locus_tag="VSAL_I0605" FT /note="PS01276 Peptidase family U32 signature." FT /inference="protein motif:ProSite:PS01276" FT CDS complement(670270..672309) FT /transl_table=11 FT /locus_tag="VSAL_I0606" FT /old_locus_tag="TVS0446" FT /product="putative signaling protein" FT /db_xref="GOA:B6ENF0" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001054" FT /db_xref="InterPro:IPR001633" FT /db_xref="InterPro:IPR013656" FT /db_xref="UniProtKB/TrEMBL:B6ENF0" FT /protein_id="CAQ78291.1" FT /translation="MSLAQIQHWLPLLTDNSPFLFAILDSDHKYVTVNNRYSEISGLNR FT ESLCGRTDPEILGEHFYSSLKSYYDRAFNGEKIEAEITLNDHRFETSLHFSLFPIEQDG FT NTYIVFHAVDTSERQLLLNSLEESESKYRKLTELLTDAIFLLEGDIIVSANTASATILG FT FNKPSEFIGESIEQLFSSPSKTKSLSELITALPSEQQLVVRSSANCATRAELSLSVEKT FT HVLGSTAHLVILKNKKPTEKNVTICSPQVDLLTGIYNRHGFTHVIEKMIKEDIPFFMLY FT LDIDIDIDNFKNINDSLGHHIGDRVLKEISTRLQKLLPKHAVVGHLGGDEFGIIFPKPE FT HNQILDQLAEKIINLINQPFDLVHFSKRLACSIGSVQYPVDGTDARSLLQNADTAMYEA FT KDRGRNRLIKFHDQMNKEARMRLWLEIELQKALQNNGLEVWYQPKVSARDFRINGAEAL FT VRWKHPVEGYISPARFIPVAERSGLIETLGKVVMREVFQTVKEWGNQGILPGRIAINLS FT PAQFGNPQLIEYMERLLKTTQVDPNCITLELTESAVMSDGEHAIQMLDAIKKLGFTLSI FT DDFGTGYSSLAYLARFPVDELKIDRGFISEIDTLPKQITIIENVINLGKNLNMDIIAEG FT VETRQQAMLLSSLNCDSIQGFHFYKPQPKQEIEALLVQNKRASS" FT misc_feature complement(670327..671052) FT /locus_tag="VSAL_I0606" FT /note="HMMPfam hit to PF00563, EAL domain, score 2.3e-108" FT /inference="protein motif:HMMPfam:PF00563" FT misc_feature complement(671092..671568) FT /locus_tag="VSAL_I0606" FT /note="HMMPfam hit to PF00990, GGDEF domain, score 3e-40" FT /inference="protein motif:HMMPfam:PF00990" FT misc_feature complement(671950..672270) FT /locus_tag="VSAL_I0606" FT /note="HMMPfam hit to PF08448, PAS fold, score 5.2e-08" FT /inference="protein motif:HMMPfam:PF08448" FT CDS 672524..673042 FT /transl_table=11 FT /locus_tag="VSAL_I0607" FT /old_locus_tag="TVS0447" FT /product="conserved hypothetical protein" FT /function="May participate in the intracellular transport FT of cholesterol and various other lipids" FT /db_xref="GOA:B6ENF1" FT /db_xref="InterPro:IPR003033" FT /db_xref="InterPro:IPR016830" FT /db_xref="UniProtKB/TrEMBL:B6ENF1" FT /protein_id="CAQ78292.1" FT /translation="MFNKIRSTLVENAASVLKVPAKVVPVSVQKKILLEGLKQVFHEAL FT EDGDFEFLEDKWLKVSILDLELQWFISYQDEKLIVSDKIEVDDVSFSGELNDLILIAGR FT KEDPDTLFFQRRLKIEGDTELGLEVKNLMDSVDLDSLPKPLNQALMTLANFVQQGLQKI FT EVKESLNAY" FT misc_feature 672611..672934 FT /locus_tag="VSAL_I0607" FT /note="HMMPfam hit to PF02036, SCP-2 sterol transfer FT family, score 1.4e-10" FT /inference="protein motif:HMMPfam:PF02036" FT CDS 673032..673535 FT /transl_table=11 FT /locus_tag="VSAL_I0608" FT /old_locus_tag="TVS0448" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6ENF2" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6ENF2" FT /protein_id="CAQ78293.1" FT /translation="MLIRTEAPADILTIDLLVKSVFDTTAEAKLVMSLRENSHLTLSLV FT ACNDDGELIGHCLFSPVTINGEDIAWQGLAPLCVKKEYQKQGVATAMMKEAFETLTELG FT YPVCVVLGDPAYYQRFGFEAAEKYNMSCQWEVPEGAFMVKACDAEFLADRSGLIEYCPE FT FNDL" FT misc_feature 673164..673400 FT /locus_tag="VSAL_I0608" FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 1.8e-11" FT /inference="protein motif:HMMPfam:PF00583" FT CDS 673678..673836 FT /transl_table=11 FT /locus_tag="VSAL_I0609" FT /old_locus_tag="TVS0449" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6ENF3" FT /protein_id="CAQ78294.1" FT /translation="MLTSCISIVNIYGIISFVNIQGVKALKVINVMFGIIIYVPTELHF FT PFLYYAS" FT misc_feature order(673690..673746,673759..673827) FT /locus_tag="VSAL_I0609" FT CDS complement(673857..674105) FT /transl_table=11 FT /locus_tag="VSAL_I0610" FT /old_locus_tag="TVS0450" FT /product="putative exported protein" FT /note="Doubtful CDS, poor translational start site. No FT significant database matches to the full length CDS" FT /db_xref="UniProtKB/TrEMBL:B6ENF4" FT /protein_id="CAQ78295.1" FT /translation="MDNVPLYFYTRSIIMKKQLLTTAGICSAIAIVIFVILLNTIAVNT FT AYAKGNDEWILIGENVINLKTETDKIKPIALIKKDHN" FT sig_peptide complement(673962..674105) FT /locus_tag="VSAL_I0610" FT misc_feature complement(673980..674048) FT /locus_tag="VSAL_I0610" FT CDS 674232..674633 FT /transl_table=11 FT /locus_tag="VSAL_I0611" FT /old_locus_tag="TVS0451" FT /product="DNA polymerase III, psi subunit" FT /EC_number="2.7.7.7" FT /db_xref="GOA:B6ENF5" FT /db_xref="InterPro:IPR004615" FT /db_xref="UniProtKB/TrEMBL:B6ENF5" FT /protein_id="CAQ78296.1" FT /translation="MPKQALQFLNEMDISVWQIRHAEYFPTLETSTISLPETCQLLFIA FT ESIPTERDAYLFGKVLASMKLKPEQALFLSSESLEYVAEHHLNWCWFSGVPVTELEGVQ FT ILNSPLLSEMHTNTQLRRDLWRQICSYDN" FT CDS 674623..675069 FT /transl_table=11 FT /gene="rimI" FT /locus_tag="VSAL_I0612" FT /old_locus_tag="TVS0452" FT /product="ribosomal-protein-alanine acetyltransferase" FT /EC_number="2.3.1.128" FT /db_xref="GOA:B6ENF6" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR006464" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6ENF6" FT /protein_id="CAQ78297.1" FT /translation="MTINIQLITESHLDDIWRIEQTAHSHSWAESMIRDLESRCAQHRV FT MLVEGKVVGYFYAQNVVGEVTLLNVAVDPAYQGKGFGRKLTEFFIDMCMEQKAESAWLE FT VRKSNAKAISLYESEGFNEVTRRHDYYPTSNGKEDAIIMSYIFF" FT misc_feature 674752..674988 FT /gene="rimI" FT /locus_tag="VSAL_I0612" FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 2.7e-18" FT /inference="protein motif:HMMPfam:PF00583" FT CDS 675187..676767 FT /transl_table=11 FT /gene="prfC" FT /locus_tag="VSAL_I0613" FT /old_locus_tag="TVS0453" FT /product="peptide chain release factor 3 (RF-3)" FT /db_xref="GOA:B6ENF7" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR004548" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009022" FT /db_xref="UniProtKB/Swiss-Prot:B6ENF7" FT /protein_id="CAQ78298.1" FT /translation="MSFLQEVGKRRTFAIISHPDAGKTTITEKVLLFGNAIQKAGTVKG FT RGSNQHAKSDWMEMEKERGISVTTSVMQFPFNGCLVNLLDTPGHEDFSEDTYRTLTAVD FT SCLMVIDAAKGVEDRTRKLMEVTRLRDTPIVTFMNKMDREVRDPMEVLDEVESELGMAC FT APISWPIGCGKEFKGVYHIHRDETILYQSGHGHEIQEVRTIKGLDNPELDVAIGNELAL FT SVREELELVIGAAHEFDLELFLKGELTPVYFGTALGNFGVDHMLEGLTEWAPAPQTREA FT TERPVEATEEKFSGFVFKIQANMDPKHRDRIAFMRIVSGTYTQGMKMNHVRTGKNISIS FT DAVTFMAGDRARAEVAYAGDIIGLHNHGTIQIGDTFTQGENLKFSGIPNFAPELFRRIR FT LRDPLKQKQLLKGLVQLSEEGAVQVFRPLQNNDLIVGAVGVLQFDVVVSRLKSEYNVEA FT IYEGISVATARWVECSDGKMQDEFQRKNQTNLALDGGNNLTYIAPTMVNLNLAIERFPD FT VQFRATREH" FT misc_feature 675208..676017 FT /gene="prfC" FT /locus_tag="VSAL_I0613" FT /note="HMMPfam hit to PF00009, Elongation factor Tu GTP FT binding domain, score 1.5e-58" FT /inference="protein motif:HMMPfam:PF00009" FT misc_feature 675349..675396 FT /gene="prfC" FT /locus_tag="VSAL_I0613" FT /note="PS00301 GTP-binding elongation factors signature." FT /inference="protein motif:ProSite:PS00301" FT misc_feature 676114..676317 FT /gene="prfC" FT /locus_tag="VSAL_I0613" FT /note="HMMPfam hit to PF03144, Elongation factor Tu domain, FT score 5.8e-08" FT /inference="protein motif:HMMPfam:PF03144" FT misc_feature 676690..676740 FT /gene="prfC" FT /locus_tag="VSAL_I0613" FT /note="PS00237 G-protein coupled receptors signature." FT /inference="protein motif:ProSite:PS00237" FT CDS 676846..676992 FT /transl_table=11 FT /locus_tag="VSAL_I0614" FT /old_locus_tag="TVS0454" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6ENF8" FT /protein_id="CAQ78299.1" FT /translation="MVIMIWKTIKLWVKKYDAWCLSLGLTPENKRSCVPYKKEEISNDN FT KTD" FT CDS 676973..677749 FT /transl_table=11 FT /locus_tag="VSAL_I0615" FT /old_locus_tag="TVS0455" FT /product="putative DNase" FT /db_xref="GOA:B6ENF9" FT /db_xref="InterPro:IPR001130" FT /db_xref="InterPro:IPR012278" FT /db_xref="InterPro:IPR018228" FT /db_xref="UniProtKB/TrEMBL:B6ENF9" FT /protein_id="CAQ78300.1" FT /translation="MTTKLIDSHCHFDFPPFKDNELFYLEKARSVGVKKLIIPSVNSSN FT WETVERLSHQYPELYYALGIHPQFLTENDEDDVKKLEVLLANKANKCVAIGECGLDFWN FT QEYDKKHQMNVFKMQCKLAVKYELPLIIHSRKSHDVVLKILREIKPLKGGVIHGFSGST FT QQAEAFIKLGFFIGVGGVISYDRSMKTKRTISELPLEWLMLETDAPDMPLSGFQGTPNT FT PDKVSNILECLIFIRKEPRETIANAVYRNANHLFGI" FT misc_feature 676979..677743 FT /locus_tag="VSAL_I0615" FT /note="HMMPfam hit to PF01026, TatD related DNase, score FT 1.6e-91" FT /inference="protein motif:HMMPfam:PF01026" FT misc_feature 676985..677011 FT /locus_tag="VSAL_I0615" FT /note="PS01137 Uncharacterized protein family UPF0006 FT signature 1." FT /inference="protein motif:ProSite:PS01137" FT CDS 677973..679256 FT /transl_table=11 FT /locus_tag="VSAL_I0616" FT /old_locus_tag="TVS0456" FT /product="putative sodium-dependent nucleoside transporter FT protein" FT /db_xref="GOA:B6ENG0" FT /db_xref="InterPro:IPR002668" FT /db_xref="InterPro:IPR008276" FT /db_xref="InterPro:IPR011642" FT /db_xref="InterPro:IPR011657" FT /db_xref="InterPro:IPR018270" FT /db_xref="UniProtKB/TrEMBL:B6ENG0" FT /protein_id="CAQ78301.1" FT /translation="MSLLMSLVGIVALLAFAVLISDNRKAINLRTVGGAFAIQFILGAF FT ILYVPVGRDVLLGASEAVANVINYGNTGIEFLFGGLVSNKMFEVFGGGGFVFALRVLPV FT IVFFASLTAVLYYLGIMQVVINFLGGALQKALGTSRAESLSATANIFVGQTEAPLVVRP FT FIPKMTQSELFAVMCGGLASVAGGVLAGYASMGVPLEYLIAASFMAAPGGLLFAKILKP FT ETETPVDQFDALDNKGDDKPANVIDAAAAGAATGMQLALNVGAMLLAFIGLIALINGIL FT GGVGGWFGMPEITLELILGYVFAPVAFLIGVPWEEATVAGSFLGQKLVVNEFVAYLNFA FT PYLKDVADGGMLVAQTGVEMSEKTKAIISFALCGFANLSSVAILLGGLGSLAPERRHDI FT AKMGMKAVAAGTLSNLMSATIAGLFLSI" FT misc_feature 677973..678218 FT /locus_tag="VSAL_I0616" FT /note="HMMPfam hit to PF01773, Na+ dependent nucleoside FT transporter N, score 7e-35" FT /inference="protein motif:HMMPfam:PF01773" FT sig_peptide 677973..678023 FT /locus_tag="VSAL_I0616" FT misc_feature order(677982..678035,678048..678116,678258..678326, FT 678489..678557,678768..678836,678855..678914, FT 679071..679139,679176..679244) FT /locus_tag="VSAL_I0616" FT misc_feature 678264..678572 FT /locus_tag="VSAL_I0616" FT /note="HMMPfam hit to PF07670, Nucleoside recognition,score FT 1.5e-17" FT /inference="protein motif:HMMPfam:PF07670" FT misc_feature 678576..679247 FT /locus_tag="VSAL_I0616" FT /note="HMMPfam hit to PF07662, Na+ dependent nucleoside FT transporter C, score 8.9e-109" FT /inference="protein motif:HMMPfam:PF07662" FT repeat_region 679302..680713 FT /note="VSa1" FT repeat_region 679302..679320 FT /note="IR of VSa1" FT CDS 679393..680700 FT /transl_table=11 FT /locus_tag="VSAL_I0617" FT /old_locus_tag="TVS0457" FT /product="transposase" FT /db_xref="GOA:B6EJK5" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR024473" FT /db_xref="UniProtKB/TrEMBL:B6EJK5" FT /protein_id="CAQ78302.1" FT /translation="MDVSQALNIINDWKPSNVETLADLLPIHLIDEAYSLTDTVTMRKR FT KLTLESMVWLLVGMAIYNNKSMKDLVNQLDIVDRTGKAFVAPSALTQRRKNLGEAAMKA FT VFERMTSSWLKSANLPKWNGLTLLGVDGVVWRAPDNQKNEEAFSRQKGTQYPQVRMVCQ FT MELSSHLITASAFDNYNTNEMILAEKLIDSTPDHSVTMFDKGFYSLGLLHKWQMTGSER FT HWLIPLKKNTQYEIIRSLGRNDKLVILRSNPRARKLFSNLPETMTARLVTRKIKGKDYQ FT VLTSMIDPLRYPLKDIVGLYEHRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGI FT LLTYNLIRYQMVELCFNLKGNYLPYQLSFNGTLAHVSALLVGLPYSTPGAIPRQLKGFH FT QMAESLILDRRRERTFPRMVKPRPQRYARNKNAIHP" FT misc_feature 679771..680430 FT /locus_tag="VSAL_I0617" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 7.6e-28" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 680695..680713 FT /note="IR of VSa1" FT CDS 681014..681223 FT /transl_table=11 FT /locus_tag="VSAL_I0618" FT /old_locus_tag="TVS0459" FT /product="putative membrane protein" FT /note="Expression may be stress-induced" FT /db_xref="InterPro:IPR009872" FT /db_xref="InterPro:IPR020017" FT /db_xref="UniProtKB/TrEMBL:B6ENG2" FT /protein_id="CAQ78303.1" FT /translation="MIKKHNKTWELTMLNEVLLSVFAGLIVGVVFSAIKLPIPAPPVLS FT GVMGIVGVYLGAIGYQWIIERFFS" FT sig_peptide 681014..681109 FT /locus_tag="VSAL_I0618" FT misc_feature order(681047..681115,681125..681193) FT /locus_tag="VSAL_I0618" FT CDS 681508..682284 FT /transl_table=11 FT /gene="deoC" FT /locus_tag="VSAL_I0619" FT /old_locus_tag="TVS0460" FT /product="deoxyribose-phosphate aldolase" FT /EC_number="4.1.2.4" FT /db_xref="GOA:B6ENG3" FT /db_xref="InterPro:IPR002915" FT /db_xref="InterPro:IPR011343" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR023649" FT /db_xref="UniProtKB/Swiss-Prot:B6ENG3" FT /protein_id="CAQ78304.1" FT /translation="MSDLKAAALRALKLMDLTTLNDNDTDEAVIALCKNAKTAVGNTAA FT VCIYPRFVPIAKKTLREQGTPDVRIATVTNFPHGNDDIAIAVAETKAAVAYGADEVDVV FT FPYRALIAGNETVGFELVKQCKEACGDILLKVIIETGELKEEALIKKTSQICIEAGANF FT IKTSTGKVPVNATPEYARMMLEVIRDMGVAKTVGFKPAGGVRTAEDAQAYLAMADDILG FT GDWADNMHYRFGASSLLTNLLNTLEVTAETADPSAY" FT misc_feature 681535..682239 FT /gene="deoC" FT /locus_tag="VSAL_I0619" FT /note="HMMPfam hit to PF01791, DeoC/LacD family FT aldolase,score 6.2e-72" FT /inference="protein motif:HMMPfam:PF01791" FT CDS 682400..683731 FT /transl_table=11 FT /gene="deoA" FT /locus_tag="VSAL_I0620" FT /old_locus_tag="TVS0461" FT /product="thymidine phosphorylase" FT /EC_number="2.4.2.4" FT /db_xref="GOA:B6ENG4" FT /db_xref="InterPro:IPR000053" FT /db_xref="InterPro:IPR000312" FT /db_xref="InterPro:IPR013102" FT /db_xref="InterPro:IPR013465" FT /db_xref="InterPro:IPR017459" FT /db_xref="InterPro:IPR017872" FT /db_xref="InterPro:IPR018090" FT /db_xref="InterPro:IPR020072" FT /db_xref="UniProtKB/Swiss-Prot:B6ENG4" FT /protein_id="CAQ78305.1" FT /translation="MYLPQEIIRRKRDNKVLTTEEINFFIQGVAKNTVSEGQIAAFAMA FT VYFNEMTMPERIALTCAMRDSGMVIDWSHMNFDGPIVDKHSTGGVGDVTSLMLGPMVAA FT CGGYVPMISGRGLGHTGGTLDKLESIAGYNIMPNNDLFGKVTKEAGVAIIGQTGDLAPA FT DKRVYATRDVTATVDNISLITASILSKKLAAGLDSLVMDVKVGSGAFMPTYEASEELAK FT SIVAVANGAGTKTTALLTDMNQVLASTAGNALEVREAIRFLTGEYRNPRLYEVAMALCA FT EMLVIANLAKDEQEACIKLQAVLDNGKAAECFGKMVFGLGGPNDIIENYDNHLETAQII FT KPVFADKSGFVNTMDTRDLGMAVVGMGGGRRVASDTIDYAVGLSDMIRLGQTVDSNQPL FT AMIHARNEDQWQQAADAVKAAIVISEEQPEATPEVYRKVRSQDV" FT misc_feature 682406..682603 FT /gene="deoA" FT /locus_tag="VSAL_I0620" FT /note="HMMPfam hit to PF02885, Glycosyl transferase family, FT helical, score 1.9e-15" FT /inference="protein motif:HMMPfam:PF02885" FT misc_feature 682631..683398 FT /gene="deoA" FT /locus_tag="VSAL_I0620" FT /note="HMMPfam hit to PF00591, Glycosyl transferase family, FT a/b doma, score 2.2e-59" FT /inference="protein motif:HMMPfam:PF00591" FT misc_feature 682736..682783 FT /gene="deoA" FT /locus_tag="VSAL_I0620" FT /note="PS00647 Thymidine and pyrimidine-nucleoside FT phosphorylases signature." FT /inference="protein motif:ProSite:PS00647" FT misc_feature 683447..683671 FT /gene="deoA" FT /locus_tag="VSAL_I0620" FT /note="HMMPfam hit to PF07831, Pyrimidine nucleoside FT phosphorylase C, score 3.7e-31" FT /inference="protein motif:HMMPfam:PF07831" FT CDS 683742..684962 FT /transl_table=11 FT /gene="deoB" FT /locus_tag="VSAL_I0621" FT /old_locus_tag="TVS0462" FT /product="phosphopentomutase" FT /EC_number="5.4.2.7" FT /db_xref="GOA:B6ENG5" FT /db_xref="InterPro:IPR006124" FT /db_xref="InterPro:IPR010045" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR024052" FT /db_xref="UniProtKB/Swiss-Prot:B6ENG5" FT /protein_id="CAQ78306.1" FT /translation="MKRAIILVLDSFGIGAAGDAEKFGDVGSDTMGHIAEQCDKGLADN FT GNRKGPLTLPNLSKLGLAMAGKESTGKLAAGLDADAEIIGAYGHAAELSSGKDTPSGHW FT EIAGVPVLFDWGYFSDKENSFPKELTDRILARANLSGYLGNCHASGTQVLDDLGEEHMK FT TGMPIFYTSADSVFQIACHEETFGLDNLLTLCQIAREELEDYNIGRVIARPFIGAGKGQ FT FERTGNRRDLSLEPPAITVLQKLVEEKNGHVHSIGKISDIYAGCGITQKTKATGIPALF FT DATKEAITAASDNTIVFTNFVDFDSAYGHRRDVAGYAAALEYFDGRLPEIMEMLQEDDI FT LILTADHGCDPTWPGTDHTREHIPVLVYGHKVPAGSLGLRDTFADIGQTLAEYFEISDM FT EYGKSFL" FT misc_feature 683748..684065 FT /gene="deoB" FT /locus_tag="VSAL_I0621" FT /note="HMMPfam hit to PF08342, Phosphopentomutase FT N-terminal, score 3.9e-66" FT /inference="protein motif:HMMPfam:PF08342" FT misc_feature 684564..684893 FT /gene="deoB" FT /locus_tag="VSAL_I0621" FT /note="HMMPfam hit to PF01676, Metalloenzyme FT superfamily,score 2.3e-39" FT /inference="protein motif:HMMPfam:PF01676" FT CDS join(685033..685161,685165..685749) FT /pseudo FT /transl_table=11 FT /gene="deoD" FT /locus_tag="VSAL_I0622" FT /old_locus_tag="TVS0463" FT /product="purine nucleoside phosphorylase (pseudogene)" FT /EC_number="2.4.2.1" FT /note="Similar to Escherichia coli Purine nucleoside FT phosphorylase DeoD-type UniProt:P0ABP8 (238 aa) fasta FT scores: E()=2.4e-10, 83.333% id in 42 aa. CDS contains a FT nonsense mutation (CGA or AGA to UGA) after codon 43. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ78307.1" FT /inference="similar to sequence:UniProt:P0ABP8" FT misc_feature order(685075..685161,685165..685731) FT /gene="deoD" FT /locus_tag="VSAL_I0622" FT /note="HMMPfam hit to PF01048, Phosphorylase family, score FT 4.8e-94" FT /inference="protein motif:HMMPfam:PF01048" FT misc_feature 685216..685263 FT /gene="deoD" FT /locus_tag="VSAL_I0622" FT /note="PS01232 Purine and other phosphorylases family 1 FT signature." FT /inference="protein motif:ProSite:PS01232" FT CDS complement(685836..686435) FT /transl_table=11 FT /gene="smp" FT /locus_tag="VSAL_I0623" FT /old_locus_tag="TVS0465" FT /product="peripheral membrane protein" FT /db_xref="InterPro:IPR019305" FT /db_xref="UniProtKB/TrEMBL:B6ENG7" FT /protein_id="CAQ78308.1" FT /translation="MMLSQNLIIKSLMLLSLIAFSYFILINSTVISDNNQIIQNKQLQD FT LSRTMTRQAALFAVDSIKKDDHEALLQLTNNLAKENLVFDATIYDAEGGVLSKSSNALT FT ASQITGINTPLSIDGIGRQQLIEPIVKDDRVLGFLRITFEKSTLTGFANHHYRKSDRLM FT FGMLIISLVSGMFIMAILKKREDSSKPVTTLFGGKS" FT misc_feature complement(order(685893..685952,686358..686417)) FT /gene="smp" FT /locus_tag="VSAL_I0623" FT sig_peptide complement(686340..686435) FT /gene="smp" FT /locus_tag="VSAL_I0623" FT misc_feature complement(686379..686426) FT /gene="smp" FT /locus_tag="VSAL_I0623" FT /note="PS00589 PTS HPR component serine phosphorylation FT site signature." FT /inference="protein motif:ProSite:PS00589" FT CDS 686566..687534 FT /transl_table=11 FT /gene="serB" FT /locus_tag="VSAL_I0624" FT /old_locus_tag="TVS0466" FT /product="phosphoserine phosphatase" FT /EC_number="3.1.3.3" FT /db_xref="GOA:B6ENG8" FT /db_xref="InterPro:IPR004469" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006383" FT /db_xref="InterPro:IPR023190" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:B6ENG8" FT /protein_id="CAQ78309.1" FT /translation="MDAITPFAIKKHTTLVNRFSTSVTASQLEVKSVGWIIYGSHLSPL FT HTKDIYFFVGMTTKVIRTWKVGDYEVAAIAGEMTPEHKIIVDELGLDYAEIKDIPDLSN FT PGIILFDMDSTTIEIECIDEIAKLAGVGEQVSEVTERAMLGELDFKESLIQRVSTLEGA FT SESILAQVKETLPFMPEMRELVMTMQNYGWKVAIASGGFTYFSDYLKEELNLVHAQSNQ FT LEIIDGKLTGKVLGDIVSAETKADILIELADKYDIEMSNTVAVGDGANDLVMMSAAGLG FT IAYHAKPKVQEQAQAAVRYADLGGVACILSASLLMNNKLSW" FT misc_feature 686878..687429 FT /gene="serB" FT /locus_tag="VSAL_I0624" FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase, score 1.5e-24" FT /inference="protein motif:HMMPfam:PF00702" FT misc_feature 686887..687495 FT /gene="serB" FT /locus_tag="VSAL_I0624" FT /note="HMMPfam hit to PF08282, haloacid dehalogenase-like FT hydrolase, score 0.00014" FT /inference="protein motif:HMMPfam:PF08282" FT CDS complement(687588..689933) FT /transl_table=11 FT /locus_tag="VSAL_I0625" FT /old_locus_tag="TVS0467" FT /product="conserved hypothetical protein" FT /note="May be involved in signalling" FT /db_xref="GOA:B6ENG9" FT /db_xref="InterPro:IPR009875" FT /db_xref="UniProtKB/TrEMBL:B6ENG9" FT /protein_id="CAQ78310.1" FT /translation="MHQEEYQSYVEQLIPVFDAPDFDSVCSQVMSHEHPSIHLIVKIEL FT KRIMTPCKKSIDLRGRVKGQCHQYSLDGYTHFLDDVAINTYHKSIERYGSYTEGVWEAL FT TNTRNNFRVLHKNKDSNPSSLQQENKNIFDAKLIRFGHYLTRSENRLRMSTQVTVLLPN FT GNHIHGTSSDLSSSGARIKVPTAFEYGLGQIIQVSFPNLAKDTGIKELNGDFPYRILGI FT HDSEENDSYRWLRLKMESNHDVIAHAIDVKLNKNKRRNQHDQRDQIVRVRTQGYEHCFL FT KHTTNIPLFFAKEQLKYAVITDHNEGLWKHWHDEKNQPVINHLFKPERMEFLTKPGLKA FT SNTHFYSFKHDHEERELFYSMMSSEGTQQERQLFWHIGAKRKSWKVIRLSLFELAKGDK FT ERLLSVAPEMEAILSSLTHMGILTEISLPETQKDYLLTDKPTLEPKTLNAYRHPIAPIC FT QAHALYYDSAPRRTEPRFNYETLITLSHPTLGELSGRTQDISIKGQSITLDKPAQLTKK FT SDVKITFNDLQMMDRNTPLSRITYHVLKVASNGQHIQLQIEDSLQTQKSKLFLGRLIQH FT NIERLPMDYEQLPSMDMLKIMHQLLLTKLTTAPFFIEKDNHSVKPRCMGVNFPLNRINK FT IWQQLGSENSVNLEPIFKSRVQRLLAEPLRTPANTRSHHHEIYIAVVIREGKIKSVFTR FT LLQEFESYNDRLTFIKKAKEHGEFLAIRVTTTAVKNPLSSTSEIELSQLAQSAIHYARA FT LEDELSSIVGCGEITDITDEVLIRLELG" FT misc_feature complement(688218..688529) FT /locus_tag="VSAL_I0625" FT /note="HMMPfam hit to PF07238, PilZ domain, score 0.00032" FT /inference="protein motif:HMMPfam:PF07238" FT misc_feature complement(689184..689504) FT /locus_tag="VSAL_I0625" FT /note="HMMPfam hit to PF07238, PilZ domain, score 5.1e-08" FT /inference="protein motif:HMMPfam:PF07238" FT CDS 690051..691430 FT /transl_table=11 FT /gene="radA" FT /locus_tag="VSAL_I0626" FT /old_locus_tag="TVS0468" FT /product="DNA repair protein RadA (dna repair protein sms)" FT /db_xref="GOA:B6ENH0" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004504" FT /db_xref="InterPro:IPR008269" FT /db_xref="InterPro:IPR014774" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:B6ENH0" FT /protein_id="CAQ78311.1" FT /translation="MAKAKRAYVCNDCGADFPRWQGQCSACGAWNTITEVRLAASPQVA FT RNERLVGYSGSATDSKVQTLSSIDLQEVPRFSSSFKEFDRVLGGGIVPGAAILIGGNPG FT AGKSTLLLQTMCRLASEMPTLYVTGEESLQQVAMRASRLGLPKDNLKMLSETSIDKICQ FT IADKEKPKIMVIDSIQVMHVDDVQSSPGSVAQVRESATTLTRYAKQNNVSIFLVGHVTK FT DGSLAGPKVLEHIIDCSVLLDGSADSRFRTLRCNKNRFGAVNELGVFAMTGQGLKEVNN FT PSAIFLSRGEEETSGSSVMVVWEGTRPLLVEIQALVDYSQLSNPRRVSVGLDQNRLSML FT LAVLHKHGGLQMADQDVFVNVVGGVKVAETSADLALIMALLSSFKDRPLPKDVVVFGEV FT GLAGEIRPVPSGQERLMEAYKHGFKRAIVPAANMPKGGIEGMQIHGVKKLSEAIDAFDE FT L" FT misc_feature 690351..690374 FT /gene="radA" FT /locus_tag="VSAL_I0626" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 691624..693708 FT /transl_table=11 FT /gene="fusA" FT /locus_tag="VSAL_I0627" FT /old_locus_tag="TVS0469" FT /product="elongation factor G (EF-G)" FT /db_xref="GOA:B6ENH1" FT /db_xref="InterPro:IPR000640" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR004540" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR005517" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR009022" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:B6ENH1" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ78312.1" FT /translation="MTDLSKYRNIGIFAHVDAGKTTTTERILKLTGQIHKTGEVHDGES FT TTDFMEQEAERGITIQSAAVSCFWKDHRFNVIDTPGHVDFTVEVYRSLKVLDGGIGVFC FT GSGGVEPQSETNWRYANESEVARIIFVNKLDRMGADFFRVIKQTETVLGANPLIMVLPI FT GIEDDFVGVVDLLTRKAFVWDDTGLPENYEITDIPADMVDQVEEYREMLVETAVEQDDD FT LMEAYMEGEEPTIEQLKMCIRKGTRTMDFFPAYCGSAFKNKGMQLILDAVVDYLPSPTE FT VDPQPLMDENGEENGEHAIVSVDETFKALAFKIMDDRFGALTFVRIYSGKLNKGDTILN FT SFTGKTERVGRMVEMQANDRNELTYAQAGDIIAIVGMKNVQTGHTLCDPKHEVTLEPMV FT FPVPVISISVTPKDKGSTEKMGIAIGKMVAEDPSFQVETDEETGETILKGMGELHLDIK FT VDILRRTYGVDLAVGQPQVAYRETITQLVEDSYTHKKQSGGSGQFGKIDYIMKPGEVGS FT GFSFKSSVVGGNVPKEFWPAIEKGFKGMMDTGVLAGFPVLDVEIELLDGGFHAVDSSAV FT AFEIAAKGAFRQSMPKAGAQLLEPIMAVDVFTPDDHVGDVIGDLNRRRGMIKDQMAGVT FT GVRVKADIPLSEMFGYIGSLRTMTSGRGQFSMEFSHYAPCPMNVAEQVIVAVKEANAKK FT " FT misc_feature 691636..692463 FT /gene="fusA" FT /locus_tag="VSAL_I0627" FT /note="HMMPfam hit to PF00009, Elongation factor Tu GTP FT binding domain, score 2.1e-99" FT /inference="protein motif:HMMPfam:PF00009" FT misc_feature 691663..691686 FT /gene="fusA" FT /locus_tag="VSAL_I0627" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 691765..691812 FT /gene="fusA" FT /locus_tag="VSAL_I0627" FT /note="PS00301 GTP-binding elongation factors signature." FT /inference="protein motif:ProSite:PS00301" FT misc_feature 692581..692784 FT /gene="fusA" FT /locus_tag="VSAL_I0627" FT /note="HMMPfam hit to PF03144, Elongation factor Tu domain, FT score 2.8e-17" FT /inference="protein motif:HMMPfam:PF03144" FT misc_feature 693046..693405 FT /gene="fusA" FT /locus_tag="VSAL_I0627" FT /note="HMMPfam hit to PF03764, Elongation factor G, domain FT IV, score 6.3e-57" FT /inference="protein motif:HMMPfam:PF03764" FT misc_feature 693409..693672 FT /gene="fusA" FT /locus_tag="VSAL_I0627" FT /note="HMMPfam hit to PF00679, Elongation factor G FT C-terminus, score 2.9e-45" FT /inference="protein motif:HMMPfam:PF00679" FT CDS complement(693819..694052) FT /transl_table=11 FT /locus_tag="VSAL_I0628" FT /old_locus_tag="TVS0470" FT /product="hypothetical protein" FT /db_xref="GOA:B6ENH2" FT /db_xref="InterPro:IPR003034" FT /db_xref="InterPro:IPR018668" FT /db_xref="UniProtKB/TrEMBL:B6ENH2" FT /protein_id="CAQ78313.1" FT /translation="MTQQNNPLHGVTLQGILTELVEHYGWEELSYMININCFKSDPTIK FT SSLKFLRKTEWARVRVENVYLKLQRHKERASK" FT CDS complement(694165..695442) FT /transl_table=11 FT /gene="codA" FT /locus_tag="VSAL_I0629" FT /old_locus_tag="TVS0471" FT /product="cytosine deaminase" FT /EC_number="3.5.4.1" FT /db_xref="GOA:B6ENH3" FT /db_xref="InterPro:IPR011059" FT /db_xref="InterPro:IPR013108" FT /db_xref="UniProtKB/TrEMBL:B6ENH3" FT /protein_id="CAQ78314.1" FT /translation="MTDLLIKNIALRDQEGLFQILIQDGQFTAIANNHEELSFSGDILD FT AEGGLANAPFCEPHVHLDTTQTAGEPSWNISGTLFEGIERWSERKKLLTVDDVKSRAKQ FT TLKWQIANGIQHVRTHVDVSDPTLIALKAMLEVKEEMKEWIDIQIVAFPQEGILSYPNG FT KALLEEAVQLGADVIGAIPHFEFTREYGVESLHYVFELAQKYDRLIDVHCDEIDDEQSR FT FIETLAALAHKFNMGEKVTASHTTAMHSYNGAYASRLFRLLKMSGINFVANPLVNIHLQ FT GRFDDYPKRRGITRVKEMLASDINVCFGHDDIFDPWYPLGTANMLQVLHMGLHVCQIMG FT YEQINQGLDLISYKSARTLNIQENYGIDVGKPGNLIILPAENGFDALRRQVPVRYSIRQ FT GKIISETQPATTTITLDKAEIVSFKR" FT misc_feature complement(694312..695295) FT /gene="codA" FT /locus_tag="VSAL_I0629" FT /note="HMMPfam hit to PF07969, Amidohydrolase family,score FT 9.4e-70" FT /inference="protein motif:HMMPfam:PF07969" FT CDS complement(695453..696706) FT /transl_table=11 FT /gene="codB" FT /locus_tag="VSAL_I0630" FT /old_locus_tag="TVS0472" FT /product="cytosine permease" FT /db_xref="GOA:B6ENH4" FT /db_xref="InterPro:IPR001248" FT /db_xref="UniProtKB/TrEMBL:B6ENH4" FT /protein_id="CAQ78315.1" FT /translation="MSHDNDFSLGPVPKTARKGIVSLTLVMLGLTFFSASMWTGGALGT FT GLSFNDFFLAVLIGNLILGIYTSFLGYIGASTGLSTHLLARFSFGSKGSWLPSLLLGGT FT QVGWFGVGVGVGVAMFAIPVQKATGIDTNTLIVISGLLMTVTVYFGISALMILSMIAVP FT AISILGGYSVLTAVDSVGGISELQKIQPTEPMDFSIALAMVVGSFISAGTLTADFVRFG FT KKPMGAVAITMIAFFIGNSLMFIFGAAGASVTGQSDISEVMIAQGLLIPAIIVLGLNIW FT TTNDNALYASGLGFSNITGLPSKYVSMLNGLIGTICALWLYNNFVGWLTFLSLAIPPIG FT GVIIADFFRNRKRYHDFNNAKFKTINWAGIIAVVIGVAAGKFLPGIVPLNAVLGGALGY FT LLLNPILNKEPASKTEIA" FT misc_feature complement(695501..696676) FT /gene="codB" FT /locus_tag="VSAL_I0630" FT /note="HMMPfam hit to PF02133, Permease for FT cytosine/purines, uracil,, score 2.9e-79" FT /inference="protein motif:HMMPfam:PF02133" FT misc_feature complement(order(695546..695614,695672..695731, FT 695741..695794,695864..695932,695960..696028, FT 696047..696115,696158..696226,696245..696313, FT 696356..696424,696485..696553,696581..696649)) FT /gene="codB" FT /locus_tag="VSAL_I0630" FT sig_peptide complement(696575..696706) FT /gene="codB" FT /locus_tag="VSAL_I0630" FT CDS complement(697136..698812) FT /transl_table=11 FT /locus_tag="VSAL_I0631" FT /old_locus_tag="TVS0473" FT /product="putative AMP-binding acetyl-CoA synthetase" FT /db_xref="GOA:B6ENH5" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:B6ENH5" FT /protein_id="CAQ78316.1" FT /translation="MSQSVFDHKQNPSLPHEAILQWAEEKPNSIFLRQVINREFVDYTF FT AEVVDKALRLVSALQDLGLNPKDRVALISKNCAEWFITDLALMLGDFVSVPIFPTAGLE FT TIEHCLTHSDSKVLIAGKLDNSDATTQVIEKLDYLSTIAFNYDSAPKCQLQFEDIVQQH FT QPSSSRPSHHDNTLMSIVYTSGTSGLPKGAMLTYGGFSTSAKHLINHIGMKPDDRLFSY FT LPLAHITERVYILGSAFFGGIQTAFPESLDTFIDDVKMHRPTLFISVPRLWTVFQQRIQ FT DKLPQKKLNILLKIPFVNGIIKRKLADGLGLDKARVLGCGSAPVSAGLLKWYESIGLNI FT TEAWGMTETFAYSTLNHPYRSDKVGTVGAAGPGVELKIAQDEEILVRGDGIFAGYYKND FT GATAESFNKDGWLHTGDIGSIDAEGFLTIQGRKKDTFKTAKGKFVAPVPIEKRIFDLSN FT LEMMCLIGSGLTGPILLAIPHTYPNFDQKRYERTALKNLETINSGLESHEKLKGILMVK FT EPWTIENGILTPTLKIKRHILEKKYHDFASQWPKDKKIIWE" FT misc_feature complement(697424..698683) FT /locus_tag="VSAL_I0631" FT /note="HMMPfam hit to PF00501, AMP-binding enzyme, score FT 3.6e-76" FT /inference="protein motif:HMMPfam:PF00501" FT misc_feature complement(698213..698245) FT /locus_tag="VSAL_I0631" FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT /inference="protein motif:ProSite:PS00178" FT misc_feature complement(698240..698275) FT /locus_tag="VSAL_I0631" FT /note="PS00455 Putative AMP-binding domain signature." FT /inference="protein motif:ProSite:PS00455" FT CDS complement(699029..701596) FT /transl_table=11 FT /gene="mutS" FT /locus_tag="VSAL_I0632" FT /old_locus_tag="TVS0474" FT /product="DNA mismatch repair protein MutS" FT /db_xref="GOA:B6ENH6" FT /db_xref="InterPro:IPR000432" FT /db_xref="InterPro:IPR001611" FT /db_xref="InterPro:IPR005748" FT /db_xref="InterPro:IPR007695" FT /db_xref="InterPro:IPR007696" FT /db_xref="InterPro:IPR007860" FT /db_xref="InterPro:IPR007861" FT /db_xref="InterPro:IPR016151" FT /db_xref="UniProtKB/Swiss-Prot:B6ENH6" FT /protein_id="CAQ78317.1" FT /translation="MAIKSTEKHTPMMQQYLRLKSENPDILLFYRMGDFYELFYDDAKR FT ASQLLEISLTKRGSSAGEPIPMAGLPYHAVEGYLAKLVQQGESVAICEQIGDPATSKGP FT VERKVVRIVTPGTVTDEALLPERFDNLIAAIYHHKGQFGYATLDITSGRFKVSEPSTEE FT SMLAELQRTSPTELLFSEDFEPVHLLEKRNGNRRRPVWEFELDTAKQQLNQQFGTRDLV FT GFGVENAEFGLCAAGCLIQYVKDTQRTTLPHIRSIVMDRQDDSVILDAATRRNLEITQN FT LAGGFNHTLSEVLDHTSTAMGSRLLKRWLHQPIRTHDVLNQRLDAIGELKSNGLYAELS FT PQLKQIGDVERILARLALRSARPRDLARLRNALQQLPELAQSTQAFEQTHLLELASLAQ FT PIDSICELLERAVKENPPVVIRDGGVLADGYNEELDQWRDLANGAALFLSKLEQEERER FT HDIDTLKVGYNNVHGFYIQISKGQSHKAPAHYVRRQTLKNAERYIIPELKAHEDKVLSS FT KSKALAIEKKLWEELFDQLLPHLEQLQLMANAISELDVLSNLAERADTLNYCRPTLSSD FT IGMKIEGGRHPVVEQVMSDPFIANPINLNDDRKMLIITGPNMGGKSTYMRQTALIALMA FT HVGCYVPADSAHIGLLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATQHSLVLMD FT EIGRGTSTYDGLSLAWASAEWLATKINAMTLFATHYFELTELPNLFSGLANVHLDAVEH FT GDEIAFMHAVQEGAANKSYGLAVASLAGVPKAVIKKAKQKLQQLENGQPKNQSLTSTQI FT KQEHQLSLIPEPSEVEEALAKVNPDDLSPRQALEALYRLKALL" FT misc_feature complement(699197..699895) FT /gene="mutS" FT /locus_tag="VSAL_I0632" FT /note="HMMPfam hit to PF00488, MutS domain V, score FT 3.5e-166" FT /inference="protein motif:HMMPfam:PF00488" FT misc_feature complement(699482..699532) FT /gene="mutS" FT /locus_tag="VSAL_I0632" FT /note="PS00486 DNA mismatch repair proteins mutS family FT signature." FT /inference="protein motif:ProSite:PS00486" FT misc_feature complement(699731..699754) FT /gene="mutS" FT /locus_tag="VSAL_I0632" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(699863..699928) FT /gene="mutS" FT /locus_tag="VSAL_I0632" FT /note="Predicted helix-turn-helix motif with score 981.000, FT SD 2.53 at aa 546-567, sequence SNLAERADTLNYCRPTLSSDIG" FT misc_feature complement(699902..700810) FT /gene="mutS" FT /locus_tag="VSAL_I0632" FT /note="HMMPfam hit to PF05192, MutS domain III, score FT 4.8e-93" FT /inference="protein motif:HMMPfam:PF05192" FT misc_feature complement(700037..700312) FT /gene="mutS" FT /locus_tag="VSAL_I0632" FT /note="HMMPfam hit to PF05190, MutS family domain IV,score FT 2.8e-40" FT /inference="protein motif:HMMPfam:PF05190" FT misc_feature complement(700832..701209) FT /gene="mutS" FT /locus_tag="VSAL_I0632" FT /note="HMMPfam hit to PF05188, MutS domain II, score 3e-45" FT /inference="protein motif:HMMPfam:PF05188" FT misc_feature complement(701231..701563) FT /gene="mutS" FT /locus_tag="VSAL_I0632" FT /note="HMMPfam hit to PF01624, MutS domain I, score FT 9.9e-68" FT /inference="protein motif:HMMPfam:PF01624" FT CDS 701705..702202 FT /transl_table=11 FT /locus_tag="VSAL_I0633" FT /old_locus_tag="TVS0475" FT /product="putative competence-damaged protein" FT /db_xref="InterPro:IPR008136" FT /db_xref="UniProtKB/TrEMBL:B6ENH7" FT /protein_id="CAQ78318.1" FT /translation="MDMIKNAQLAQKVGELLMQQGKMMACSESCTGGGVAFCATENAGS FT SAWFERGFVTYSNEAKQDSLGVNLETIGRFGAVSEEVVKEMAFGTLAHSEADISVSISG FT IAGPGGATEGKPIGTVCFGFADTTNWHVERTVYFTGDRTKVRQSAIEYAFLTLKKRLLE FT AN" FT misc_feature 701720..702187 FT /locus_tag="VSAL_I0633" FT /note="HMMPfam hit to PF02464, Competence-damaged FT protein,score 2e-63" FT /inference="protein motif:HMMPfam:PF02464" FT CDS 702343..703386 FT /transl_table=11 FT /gene="recA" FT /locus_tag="VSAL_I0634" FT /old_locus_tag="TVS0476" FT /product="protein RecA (recombinase A)" FT /db_xref="GOA:B6ENH8" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR013765" FT /db_xref="InterPro:IPR020584" FT /db_xref="InterPro:IPR020587" FT /db_xref="InterPro:IPR020588" FT /db_xref="InterPro:IPR023400" FT /db_xref="UniProtKB/Swiss-Prot:B6ENH8" FT /protein_id="CAQ78319.1" FT /translation="MDDNKKKALAAALGQIEKQFGKGSIMKLGDNRTMDVETVSTGSLS FT LDIALGAGGLPMGRIVEIYGPESSGKTTLTLEVIAQAQKAGKTCAFIDAEHALDPIYAQ FT KLGVDIDQLLCSQPDTGEQALEIVDALARSGAVDLIVVDSVAALTPKAEIEGEMGDSHM FT GLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRL FT DIRRTGAVKDGDEVVGNETRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKHK FT LVDKAGAWYSYNGDKIGQGKANASKFMRENPEIGAELDKKLREMLLTPTEDKPEVVEKI FT EEENEEF" FT misc_feature 702361..703326 FT /gene="recA" FT /locus_tag="VSAL_I0634" FT /note="HMMPfam hit to PF00154, recA bacterial DNA FT recombination protein, score 4e-243" FT /inference="protein motif:HMMPfam:PF00154" FT misc_feature 702535..702558 FT /gene="recA" FT /locus_tag="VSAL_I0634" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 702979..703005 FT /gene="recA" FT /locus_tag="VSAL_I0634" FT /note="PS00321 recA signature." FT /inference="protein motif:ProSite:PS00321" FT CDS 703629..706211 FT /transl_table=11 FT /gene="alaS" FT /locus_tag="VSAL_I0635" FT /old_locus_tag="TVS0477" FT /product="alanyl-tRNA synthetase" FT /EC_number="6.1.1.7" FT /db_xref="GOA:B6ENH9" FT /db_xref="InterPro:IPR002318" FT /db_xref="InterPro:IPR003156" FT /db_xref="InterPro:IPR012947" FT /db_xref="InterPro:IPR018162" FT /db_xref="InterPro:IPR018163" FT /db_xref="InterPro:IPR018164" FT /db_xref="InterPro:IPR018165" FT /db_xref="InterPro:IPR023033" FT /db_xref="UniProtKB/TrEMBL:B6ENH9" FT /protein_id="CAQ78320.1" FT /translation="MYMSTDEVRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMN FT QFKDCFLGSEKRSYTRATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFK FT QDAIKYAWEFLTERLELPADRLLVTIYETDDEAFEIWNKEMGIPADRIVRIGDNKGAPY FT ASDNFWQMGDTGPCGPCTEIFYDHGEHIWGGRPGTPEEDGDRFIEIWNNVFMQFNRLAD FT GTMEPLPKPSVDTGMGIERIAAIMQGVHSNYEIDIFQTLIKETAKVVGYDDLSNQSLRV FT VADHIRSCSYLIVDGVMPSNEGRGYVLRRIIRRAVRHGNKLGAKGSYFYKLVGPLAEIM FT GTAGEELKKQQALVEKVLKIEEENFGRTLERGMVILNEALDNLEGTVLDGETVFKLYDT FT YGFPADLTNDVARERELTIDEDGFEKAMNEQRQRAREAGQFGTDYNAVIKVESETVFHG FT YDFTEAKATVLEIFCEGEAVETLSAGDDAILILDVTPFYAESGGQSGDAGIITVEAGKF FT VVTDTQKVGNAIGHHGKLVEGVLSTADRAMAQVDEERRTAITLNHSATHLLHAALRQVL FT GEHVTQKGSLVKAESLRFDFSNLEGVKPEELRLVERIVNQQVRLNHAIETDLMDVDAAK FT EKGAMALFGEKYDDEVRVLSMGEFSTELCGGIHASSTGDIGLFKITSEGGIAAGIRRIE FT AVTGEAALDAIESQQKLADKKLHDASSKTKLLEKEIQQLKDKLASQASSDLISQVQDIS FT GVKVLITQLDGADNKALRGMVDELKNQIGSGVIMIGNVSDDKVGLIAGVTKDLIGQVKA FT GELVNMVALQVGGKGGGRPDMAQAGGTDAKALPAALATVEAWLTERLS" FT misc_feature 703647..705290 FT /gene="alaS" FT /locus_tag="VSAL_I0635" FT /note="HMMPfam hit to PF01411, tRNA synthetases class II FT (A), score 0" FT /inference="protein motif:HMMPfam:PF01411" FT misc_feature 704334..704363 FT /gene="alaS" FT /locus_tag="VSAL_I0635" FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT /inference="protein motif:ProSite:PS00339" FT misc_feature 705579..705710 FT /gene="alaS" FT /locus_tag="VSAL_I0635" FT /note="HMMPfam hit to PF07973, Threonyl and Alanyl tRNA FT synthetase seco, score 6.5e-21" FT /inference="protein motif:HMMPfam:PF07973" FT misc_feature 705975..706187 FT /gene="alaS" FT /locus_tag="VSAL_I0635" FT /note="HMMPfam hit to PF02272, DHHA1 domain, score 4.5e-21" FT /inference="protein motif:HMMPfam:PF02272" FT CDS 706221..707390 FT /transl_table=11 FT /gene="lysC" FT /locus_tag="VSAL_I0636" FT /old_locus_tag="TVS0478" FT /product="aspartokinase 2" FT /EC_number="2.7.2.4" FT /db_xref="GOA:B6ENI0" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR001341" FT /db_xref="InterPro:IPR005260" FT /db_xref="InterPro:IPR018042" FT /db_xref="UniProtKB/TrEMBL:B6ENI0" FT /protein_id="CAQ78321.1" FT /translation="MALIVQKYGGTSVGSVERIQLVSDRIILTKQQGHQVVVAVSAMAG FT ETNRLLNLAHQINEVPEPRELDMLLSAGEQVSIALLAISLNQKGIKAISLTADQAGIKT FT NDVFNDATIEHIETSKLTEWLDKGYVVIVAGFQGRDSVGNITTLGRGGSDTTAVALAAA FT LKADECQIFTDVDGVYSSDPRYVSNTRKLKEVSFSDMHALAKSGAKVLQEHSVSHAWRS FT SVSLRVLSSFDNGEGTLICEKPNDYFPVTGLALKQDLYLAECTDINEEDRILLAKEYRV FT LTNTDDCFQIVVPKATFLQLKLVFNTKIRNISSLSILTLVGDNVEGMADSACNQLMVNS FT VDIYQCYTEPKSVSVIVIQADLQQAAEILHKTFVITEQSQDNNVLIAVS" FT misc_feature 706224..706910 FT /gene="lysC" FT /locus_tag="VSAL_I0636" FT /note="HMMPfam hit to PF00696, Amino acid kinase FT family,score 6.2e-70" FT /inference="protein motif:HMMPfam:PF00696" FT misc_feature 706233..706259 FT /gene="lysC" FT /locus_tag="VSAL_I0636" FT /note="PS00324 Aspartokinase signature." FT /inference="protein motif:ProSite:PS00324" FT misc_feature 706257..706286 FT /gene="lysC" FT /locus_tag="VSAL_I0636" FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT /inference="protein motif:ProSite:PS00339" FT CDS 707472..707672 FT /transl_table=11 FT /gene="csrA" FT /locus_tag="VSAL_I0637" FT /old_locus_tag="TVS0479" FT /product="carbon storage regulator" FT /db_xref="GOA:B6ENI1" FT /db_xref="InterPro:IPR003751" FT /db_xref="UniProtKB/Swiss-Prot:B6ENI1" FT /protein_id="CAQ78322.1" FT /translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHRE FT EIYMRIQAEKGTTPAAAPGNF" FT misc_feature 707472..707651 FT /gene="csrA" FT /locus_tag="VSAL_I0637" FT /note="HMMPfam hit to PF02599, Global regulator protein FT family, score 9.4e-30" FT /inference="protein motif:HMMPfam:PF02599" FT tRNA 707891..707980 FT /locus_tag="VSAL_I3128t" FT /product="transfer RNA-Ser" FT tRNA 708037..708110 FT /locus_tag="VSAL_I3129t" FT /product="transfer RNA-Arg" FT tRNA 708186..708275 FT /locus_tag="VSAL_I3130t" FT /product="transfer RNA-Ser" FT tRNA 708331..708404 FT /locus_tag="VSAL_I3131t" FT /product="transfer RNA-Arg" FT tRNA 708474..708547 FT /locus_tag="VSAL_I3132t" FT /product="transfer RNA-Arg" FT tRNA 708617..708690 FT /locus_tag="VSAL_I3133t" FT /product="transfer RNA-Arg" FT tRNA 708760..708833 FT /locus_tag="VSAL_I3134t" FT /product="transfer RNA-Arg" FT tRNA 708902..708975 FT /locus_tag="VSAL_I3135t" FT /product="transfer RNA-Arg" FT CDS 709310..709561 FT /transl_table=11 FT /locus_tag="VSAL_I0638" FT /old_locus_tag="TVS0480" FT /product="oxaloacetate decarboxylase 1, subunit gamma" FT /EC_number="4.1.1.3" FT /db_xref="GOA:B6EGA8" FT /db_xref="InterPro:IPR005899" FT /db_xref="InterPro:IPR023424" FT /db_xref="UniProtKB/TrEMBL:B6EGA8" FT /protein_id="CAQ78323.1" FT /translation="MTDIGSLLWEAATLMLTGMGVVFIFLTILVYLVQLMSKLLPVELP FT PKQVLAVQKVQNPDETTVQPQIIAAISAAVKLYRQKNR" FT misc_feature 709331..709552 FT /locus_tag="VSAL_I0638" FT /note="HMMPfam hit to PF04277, Oxaloacetate FT decarboxylase,gamma chain, score 3.3e-23" FT /inference="protein motif:HMMPfam:PF04277" FT misc_feature 709340..709408 FT /locus_tag="VSAL_I0638" FT CDS 709599..711386 FT /transl_table=11 FT /locus_tag="VSAL_I0639" FT /old_locus_tag="TVS0481" FT /product="oxaloacetate decarboxylase 2, subunit alpha" FT /EC_number="4.1.1.3" FT /db_xref="GOA:B6EGA9" FT /db_xref="InterPro:IPR000089" FT /db_xref="InterPro:IPR000891" FT /db_xref="InterPro:IPR001882" FT /db_xref="InterPro:IPR003379" FT /db_xref="InterPro:IPR005776" FT /db_xref="InterPro:IPR011053" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:B6EGA9" FT /protein_id="CAQ78324.1" FT /translation="MSKPLSITDVVLRDAHQSLFATRMRVEDMLPIAEQLDKIGYWSLE FT TWGGATFDACIRYLGEDPWERLRLLKKAMPNTPMQMLLRGQNLLGYRHYADDVVEKFVE FT RAHCNGMDVFRIFDAMNDVRNFQTAVKATIDVGAHAQGTLSYTTSPVHNSDTWVDLAKR FT LEDLGCHSLCIKDMSGLLKPYEAEELITRIKSSCDVPLALHSHATTGLSTATALKAAEA FT GIDILDTAISSMSQTYGHTPTETVVAMLEGTGRDTNLNLEQLEPIATYFREVRKKYAKF FT EGQMKGVDSRILIAQVPGGMLTNMESQLKEQGAADRLDEVLIEIPKVRKDLGYIPLVTP FT TSQIVGTQAVINILTGERYKSITKETAGVLKGEYGSAPAAVNAELQARVLEGAEPITCR FT PADLLAAELHTLTDELIAKAKEDNIALAEEQIDDVLTYALFPQVGLKFLKNRNNPDAFE FT PAPGTEVESAANVVKANTAKGGVEAYSVKVDGQIYNVEVGPQGVISSVEPISAQAAPVQ FT SPQLSAVDAESVDAPLAGTIFKVLVQAGAEVAEGDVLLILEAMKMETEIRASRNGTVQD FT ILTKEGDAVAVGTPLLSLA" FT misc_feature 709635..710429 FT /locus_tag="VSAL_I0639" FT /note="HMMPfam hit to PF00682, HMGL-like, score 2.2e-68" FT /inference="protein motif:HMMPfam:PF00682" FT misc_feature 710472..711101 FT /locus_tag="VSAL_I0639" FT /note="HMMPfam hit to PF02436, Conserved carboxylase FT domain, score 1.1e-75" FT /inference="protein motif:HMMPfam:PF02436" FT misc_feature 711177..711380 FT /locus_tag="VSAL_I0639" FT /note="HMMPfam hit to PF00364, Biotin-requiring FT enzyme,score 3.4e-23" FT /inference="protein motif:HMMPfam:PF00364" FT misc_feature 711249..711302 FT /locus_tag="VSAL_I0639" FT /note="PS00188 Biotin-requiring enzymes attachment site." FT /inference="protein motif:ProSite:PS00188" FT CDS 711398..712528 FT /transl_table=11 FT /locus_tag="VSAL_I0640" FT /old_locus_tag="TVS0482" FT /product="oxaloacetate decarboxylase, beta subunit" FT /EC_number="4.1.1.3" FT /db_xref="GOA:B6EGB0" FT /db_xref="InterPro:IPR005661" FT /db_xref="UniProtKB/TrEMBL:B6EGB0" FT /protein_id="CAQ78325.1" FT /translation="MDGLLILWNETAIANFKFEQLIMILVGCGLLFLAIRKGFEPLLLL FT PIGFGAVLANIPNAGFTDPGGLLYYVYYVGIETGVFPLLIFMGVGAMTDFGALIANPKT FT LWLGAAAQVGIFATLFGAILLNFVPGMEFSLADASSIAIIGGADGPTAIFLASKLSPDL FT LGAIAVAAYSYMALVPIIQPPIMKALTTPEERQIKMAQLRHVSKAEKIIFPLAVLLMTI FT LFLPSATPLVGMFCLGNLMKESGVVDRLSNTAQNELINIVTIFLGLGVGSKLKAETFLN FT VETLGILLLGAVAFSVGTAGGVIMAKILNKYSKEDINPLIGAAGVSAVPMAARVVNKVG FT LEANPQNFLLMHAMGPNVAGVLGSAVAAGILLALVG" FT misc_feature order(711434..711502,711512..711580,711599..711667, FT 711710..711778,712028..712096,712154..712213, FT 712247..712315,712454..712522) FT /locus_tag="VSAL_I0640" FT misc_feature 711446..712525 FT /locus_tag="VSAL_I0640" FT /note="HMMPfam hit to PF03977, Na+-transporting FT methylmalonyl-CoA/oxaloacet, score 2.4e-274" FT /inference="protein motif:HMMPfam:PF03977" FT CDS 712625..713056 FT /transl_table=11 FT /locus_tag="VSAL_I0641" FT /old_locus_tag="TVS0483" FT /product="inner membrane protein" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:B6EGB1" FT /protein_id="CAQ78326.1" FT /translation="MFDWFNADSALWVLFSSGFLSATLLPGASEASLIATLKLDSFSMW FT TVITVATLGNTLGGITNYWLGLLLPDKTSSQKHGHKAIEWIKKYGYWTLLFSWLPVIGD FT PLCLAAGWLRMKFLPCVILIGIGKAARYVLLSLAVNGIL" FT sig_peptide 712625..712717 FT /locus_tag="VSAL_I0641" FT misc_feature order(712658..712726,712763..712831,712892..712960, FT 712973..713041) FT /locus_tag="VSAL_I0641" FT CDS 713065..715917 FT /transl_table=11 FT /locus_tag="VSAL_I0642" FT /old_locus_tag="TVS0484" FT /product="exported pepdidase, putative zinc protease" FT /db_xref="GOA:B6EGB2" FT /db_xref="InterPro:IPR007863" FT /db_xref="InterPro:IPR011237" FT /db_xref="InterPro:IPR011249" FT /db_xref="InterPro:IPR011765" FT /db_xref="UniProtKB/TrEMBL:B6EGB2" FT /protein_id="CAQ78327.1" FT /translation="MKKLLCVSIALALVGCSNSEFEAPKTSDLPQGVTLVEQVLPKEGS FT TVIPYQKYTLENGLTVILSPDSSDPLVHVDVTYHVGSAREDIGKSGFAHFFEHMMFQGS FT EHVGDQQHFKIITEAGGTLNGTTNRDRTNYFETVPANQLEKMLWLESDRMGFLIDAVSQ FT KKFEIQRSTVKNERGQNYDNRPYGLIYERMGEALFPQDHPYSWQTIGYVEDLDRVDVND FT LKAFFLRWYGPNNAVITIGGDLDSKQTLEWVNKYFGTIPRGPEVENAPKQPVTLTEDRF FT ITLEDRIQQPMVMIGWPTTYRGEETEASLDMLATLLGNGKTSLMYQELVKTGKAVDAGA FT FHDCAELSCTMYVYAMTDSSDKNDLATAYQEVMDVLDKFEKEGVSQEDLAEVQGSAEAG FT AIFGLQSVSGKVSQLASNETFYGNPNQLEAQLAELKAVTPDKVSQAFDTYIANKYKVTL FT SVVPKGKTQLQVRKPNFITPKRDLPEYQKIDENSLDVRKAVDNFDRSVMPQPSKAVTAK FT TPDIYRAKLANGIEVLGSEAIETPTVQLQISIPAGNRYVSRGKEGLASLTASMMEEGTV FT KSSSEDIQKRLDKLGSSISFNSGSYTTAISISSLTKNLDETLSIVNEMLFSPAFKQSDF FT DRLQKQAIEGLVYDHQKPAWLASQATREVLFKGTIFDRSPDGTMESVKSLTLSDVKAFY FT KKRYTPIGTQVVSVGDVQKSDLISKLSFLSTWEGSAPSLLAPQQLPTLAGQKIYLIDKP FT NAPQSVVRFVRQGIPFDATGELYQTQLANFNLAGNFNSRINQNLREDKGYTYGAGGYLM FT GNKEVGMAIFYAQVRADVTLESIKEFISEMDKYKNDGMTMDELNFMRLAVGQQDALKYE FT TPSQKANLLGKILTYSLDDDFIDEQNTLIATLGREDLNALASKWFDPTQYQIIVVGDAK FT SLTPKLKTLGLPIESITVNK" FT sig_peptide 713065..713130 FT /locus_tag="VSAL_I0642" FT misc_feature 713245..713700 FT /locus_tag="VSAL_I0642" FT /note="HMMPfam hit to PF00675, Insulinase (Peptidase family FT M16), score 2.3e-06" FT /inference="protein motif:HMMPfam:PF00675" FT misc_feature 713311..713334 FT /locus_tag="VSAL_I0642" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 713713..714252 FT /locus_tag="VSAL_I0642" FT /note="HMMPfam hit to PF05193, Peptidase M16 inactive FT domain, score 1.2e-43" FT /inference="protein motif:HMMPfam:PF05193" FT misc_feature 715114..715650 FT /locus_tag="VSAL_I0642" FT /note="HMMPfam hit to PF05193, Peptidase M16 inactive FT domain, score 9.8e-26" FT /inference="protein motif:HMMPfam:PF05193" FT CDS 716044..717609 FT /transl_table=11 FT /gene="gshA" FT /locus_tag="VSAL_I0643" FT /old_locus_tag="TVS0485" FT /product="glutamate--cysteine ligase" FT /EC_number="6.3.2.2" FT /db_xref="GOA:B6EGB3" FT /db_xref="InterPro:IPR006334" FT /db_xref="InterPro:IPR007370" FT /db_xref="UniProtKB/Swiss-Prot:B6EGB3" FT /protein_id="CAQ78328.1" FT /translation="MTEFTNRLQKVASNPKAFKNTGRGIERETLRFTLDAALSSKPHPA FT GVGSALTHKYITTDFAESLLEFITPVSHDVKTVLKQLEDVHHYTVSHMGEEKLWPLSMP FT CFVSKDDDITLAQYGKSNVGQLKTTYREGLKRRYGSVMQVISGVHFNFSFSNEFWDELL FT GEQTEKDRQDSVSDAYFGLIRNYYRFGWLIPYFFGASPALCGSFIQGRETTMNFESLGK FT TLYLPYATSLRLSDLGYTNDAQSDLKISLNSIDEYIEGLNKAIRTPSEEFAKIGLKEGD FT KHIQLNANVLQIENELYAPIRPKRVAKSGEKPSEALERSGIEYIEVRSLDVNPFSPIGV FT DEDQVRFLDLFLTWSVLTDSAPMDDSEMACWKDNWNKIVELGRKPGLELQIGCQGERLT FT QKAWAERVFDDLFTIAKKMDAVNGDDAYQQTHQRLSAMIENPELTISGRLLAETKKAGG FT IGIIGCKLAIQHRQAHLDHKYSFYTKDELDAEVERSVLAQKEIEASDTMPFSEYLDDYF FT NYLK" FT misc_feature 716056..717180 FT /gene="gshA" FT /locus_tag="VSAL_I0643" FT /note="HMMPfam hit to PF04262, Glutamate-cysteine FT ligase,score 1.2e-232" FT /inference="protein motif:HMMPfam:PF04262" FT CDS 717676..718275 FT /transl_table=11 FT /locus_tag="VSAL_I0644" FT /old_locus_tag="TVS0486" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR023346" FT /db_xref="UniProtKB/TrEMBL:B6EGB4" FT /protein_id="CAQ78329.1" FT /translation="MNYKFSLIIVALVSLSGCATAPPTKQDNLCEIFREKGGWYDDAKD FT MNEEYGTPINVAMAIMKQESSFRSDVRPPRTKLLGFIPWSRPSSAYGYAQAQDPVWGEY FT EDETGGGSRSSFDDAIMFIGWYTDGSQKQLGISKWDPYNQYLAYHEGRGGYKRKSYQKK FT PQLIKIARRVESQAKTYGWQLKQCKVELERQSSWWW" FT sig_peptide 717676..717738 FT /locus_tag="VSAL_I0644" FT misc_feature 717697..717729 FT /locus_tag="VSAL_I0644" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 718309..718827 FT /transl_table=11 FT /gene="luxS" FT /locus_tag="VSAL_I0645" FT /old_locus_tag="TVS0487" FT /product="S-ribosylhomocysteine lyase" FT /EC_number="4.4.1.21" FT /db_xref="GOA:B6EGB5" FT /db_xref="InterPro:IPR003815" FT /db_xref="InterPro:IPR011249" FT /db_xref="UniProtKB/Swiss-Prot:B6EGB5" FT /protein_id="CAQ78330.1" FT /translation="MPLLDSFTVDHTRMEAPAVRVAKKMQTPKGDTITVFDLRFTAPNK FT DILSEKGIHTLEHLYAGFMRNHLNGTDVEIIDISPMGCRTGFYMSLIGTPVEQTVANAW FT IASMEDVLNVEDQNKIPELNEYQCGTYTMHSLEEAKAIATAILAAGIQVNKNDDLALPE FT SMLKELSVD" FT misc_feature 718312..718794 FT /gene="luxS" FT /locus_tag="VSAL_I0645" FT /note="HMMPfam hit to PF02664, S-Ribosylhomocysteinase FT (LuxS), score 5.7e-103" FT /inference="protein motif:HMMPfam:PF02664" FT CDS complement(718895..720166) FT /transl_table=11 FT /locus_tag="VSAL_I0646" FT /old_locus_tag="TVS0488" FT /product="putative transport protein" FT /db_xref="GOA:B6EGB6" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR002550" FT /db_xref="InterPro:IPR005170" FT /db_xref="InterPro:IPR016169" FT /db_xref="UniProtKB/TrEMBL:B6EGB6" FT /protein_id="CAQ78331.1" FT /translation="MDDISTGALFTILAVLIIASGYFSSSETGMMSLNRYRLKHLSNQG FT HKGAQRVEKLLSRPDRLIGLILIGNNLVNILASAIATILGMRLYGDYGVAIATGVLTLV FT ILVFAEVTPKTLAAMYPERVAYSSSILLNILMKILSPLVILVNLITNGFLKLLGLGTNH FT SHKDNLSSEELRTVVHEAGGLIPRRHQDMLISILDLEHVTVNDIMVPRSEITGIDINDD FT WKSISRQLAHSPHGRIVLYRDQIDEVVGMLRLRESYRLMLEKNEFTKETLLRAADEIYF FT IPEATPLNIQLLKFQRNKERIGLIVDEYGDIQGLITLEDILEEIVGEFTTSMAPSLTEE FT ITPQPDGSFMIEGSANIRDINKGLKWSLPTDGPRTLNGLILEHLEEIPGTQIKVNIEHH FT QMEIIAVEENKINLVKVFPSSDNN" FT misc_feature complement(718907..719143) FT /locus_tag="VSAL_I0646" FT /note="HMMPfam hit to PF03471, Transporter associated FT domain, score 5.2e-13" FT /inference="protein motif:HMMPfam:PF03471" FT misc_feature complement(719189..719545) FT /locus_tag="VSAL_I0646" FT /note="HMMPfam hit to PF00571, CBS domain pair, score FT 5.6e-18" FT /inference="protein motif:HMMPfam:PF00571" FT misc_feature complement(719594..720145) FT /locus_tag="VSAL_I0646" FT /note="HMMPfam hit to PF01595, Domain of unknown function FT DUF21, score 9.1e-68" FT /inference="protein motif:HMMPfam:PF01595" FT misc_feature complement(order(719729..719797,719834..719902, FT 719915..719983,720089..720157)) FT /locus_tag="VSAL_I0646" FT sig_peptide complement(720092..720166) FT /locus_tag="VSAL_I0646" FT CDS complement(720268..721062) FT /transl_table=11 FT /locus_tag="VSAL_I0647" FT /old_locus_tag="TVS0489" FT /product="inner membrane protein, putative cytochrome c FT assembly protein" FT /db_xref="GOA:B6EGB7" FT /db_xref="InterPro:IPR002541" FT /db_xref="UniProtKB/TrEMBL:B6EGB7" FT /protein_id="CAQ78332.1" FT /translation="MDIITAISAALFYFLALGFVIPGLASQNKIKTNAVFICASFALLV FT HAWQLKELILNTSGQNLSILNVASLISFIISLTMSVSMLKFRVWFILPVVYSFSAINLL FT AATFLSGAFITHLETHPSLLIHISLALFAYSTLMIATLYALQLAWLDHKLRSKKSLTLN FT PNLPPLMMVERQLFKIILVGLFLLTLTLLTGLTFIQDMLAQGKTHKAVLSFIAWVIYAV FT LTWGHYQRGWRGQKALWFSLTGAFLLTLAYFGSRFVQEVILT" FT misc_feature complement(720274..720963) FT /locus_tag="VSAL_I0647" FT /note="HMMPfam hit to PF01578, Cytochrome C assembly FT protein, score 1e-66" FT /inference="protein motif:HMMPfam:PF01578" FT misc_feature complement(order(720286..720354,720379..720432, FT 720460..720528,720628..720696,720724..720792, FT 720811..720870,720913..720966,720985..721053)) FT /locus_tag="VSAL_I0647" FT sig_peptide complement(720988..721062) FT /locus_tag="VSAL_I0647" FT CDS 721225..722610 FT /transl_table=11 FT /gene="ffh" FT /locus_tag="VSAL_I0648" FT /old_locus_tag="TVS0490" FT /product="signal recognition particle protein" FT /db_xref="GOA:B6EGB8" FT /db_xref="InterPro:IPR000897" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004125" FT /db_xref="InterPro:IPR004780" FT /db_xref="InterPro:IPR013822" FT /db_xref="UniProtKB/TrEMBL:B6EGB8" FT /protein_id="CAQ78333.1" FT /translation="MFDNLTDRLSKTLKNISGKGRLTEENIKETLREVRMALLEADVAL FT PVVRDFVKRIKENAVGVEVSKSLTPGQEFIKIVQSELEAIMGDSNEALNLACQPPAVIL FT MAGLQGAGKTTSTGKLAKLLKERDKKKVLVVSADVYRPAAIKQLEMLASEVDVDFFPSS FT ADQKPIDIVDGAISHAKLKFFDVVIVDTAGRLAVDTEMMEEIKQLHAHVNPIETLFVVD FT AMTGQDAANTAKAFGDILPLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDA FT LEPFHPERIASRILGMGDVLSLIEDLEKNVDKEKAERLAKKFKEKKGFDLEDFREQLGQ FT MTNMGGMMGMMDKLPGMSQLPANVKDKVDDKMFNQMEAIINSMTMKERQRPELIKGSRK FT KRIAAGSGTQVQDVNRMLKQFTQMQKMMKKMQKGGMKGMMRNMQGMMGGMGGMGGGMGG FT FGR" FT misc_feature 721225..721485 FT /gene="ffh" FT /locus_tag="VSAL_I0648" FT /note="HMMPfam hit to PF02881, SRP54-type protein, helical FT bundle domain, score 4.7e-34" FT /inference="protein motif:HMMPfam:PF02881" FT misc_feature 721519..722112 FT /gene="ffh" FT /locus_tag="VSAL_I0648" FT /note="HMMPfam hit to PF00448, SRP54-type protein, GTPase FT domain, score 2.1e-113" FT /inference="protein motif:HMMPfam:PF00448" FT misc_feature 721543..721566 FT /gene="ffh" FT /locus_tag="VSAL_I0648" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 722029..722070 FT /gene="ffh" FT /locus_tag="VSAL_I0648" FT /note="PS00300 SRP54-type proteins GTP-binding domain FT signature." FT /inference="protein motif:ProSite:PS00300" FT misc_feature 722206..722505 FT /gene="ffh" FT /locus_tag="VSAL_I0648" FT /note="HMMPfam hit to PF02978, Signal peptide binding FT domain, score 2.5e-47" FT /inference="protein motif:HMMPfam:PF02978" FT CDS 722830..723120 FT /transl_table=11 FT /gene="rpsP" FT /locus_tag="VSAL_I0649" FT /old_locus_tag="TVS0491" FT /product="30S ribosomal protein S16" FT /db_xref="GOA:B6EGB9" FT /db_xref="InterPro:IPR000307" FT /db_xref="InterPro:IPR020592" FT /db_xref="InterPro:IPR023803" FT /db_xref="UniProtKB/TrEMBL:B6EGB9" FT /protein_id="CAQ78334.1" FT /translation="MSQFNFCTKQIEDDMVTIRLARHGAKKRPFYQIVVADSRFKSTGR FT YIEKVGFFNPTAQGQEEGLRLDLDRVNHWVGLGAGLSDRVAKLVKDANKAA" FT misc_feature 722875..722904 FT /gene="rpsP" FT /locus_tag="VSAL_I0649" FT /note="PS00732 Ribosomal protein S16 signature." FT /inference="protein motif:ProSite:PS00732" FT misc_feature 722893..723075 FT /gene="rpsP" FT /locus_tag="VSAL_I0649" FT /note="HMMPfam hit to PF00886, Ribosomal protein S16,score FT 5.1e-27" FT /inference="protein motif:HMMPfam:PF00886" FT CDS 723147..723674 FT /transl_table=11 FT /gene="rimM" FT /locus_tag="VSAL_I0650" FT /old_locus_tag="TVS0492" FT /product="16S rRNA processing protein RimM" FT /db_xref="GOA:B6EGC0" FT /db_xref="InterPro:IPR002676" FT /db_xref="InterPro:IPR007903" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR011033" FT /db_xref="InterPro:IPR011961" FT /db_xref="UniProtKB/Swiss-Prot:B6EGC0" FT /protein_id="CAQ78335.1" FT /translation="MSKQDEVIVVGKFGASYGIRGWLKVVSFTDQPESIFDYKPLLIKV FT KDEWVEFSVESWKRHKGLVCKLEGLEVREEAQAYTNLEIAVKADALPELSEDEFYWREL FT FGMEVVTSQGYGLGIVDDIFETGSNDVLVVKANLKDAFGKKERLIPFIDEQVIKVIDRE FT AQRIEVDWDPGF" FT misc_feature 723171..723416 FT /gene="rimM" FT /locus_tag="VSAL_I0650" FT /note="HMMPfam hit to PF01782, RimM N-terminal domain,score FT 6e-28" FT /inference="protein motif:HMMPfam:PF01782" FT misc_feature 723432..723671 FT /gene="rimM" FT /locus_tag="VSAL_I0650" FT /note="HMMPfam hit to PF05239, PRC-barrel domain, score FT 3.7e-16" FT /inference="protein motif:HMMPfam:PF05239" FT CDS 723697..724446 FT /transl_table=11 FT /gene="trmD" FT /locus_tag="VSAL_I0651" FT /old_locus_tag="TVS0493" FT /product="tRNA(guanine-N1)methyltransferase" FT /EC_number="2.1.1.31" FT /db_xref="GOA:B6EGC1" FT /db_xref="InterPro:IPR002649" FT /db_xref="InterPro:IPR016009" FT /db_xref="InterPro:IPR023148" FT /db_xref="UniProtKB/Swiss-Prot:B6EGC1" FT /protein_id="CAQ78336.1" FT /translation="MWVGVISLFPEMFRSVTDFGVTSQAIKKGLLSIETWNPRDFTQDK FT HRTVDDRPYGGGPGMLMMVQPLRDAITAAREAAPGKTKVIYLSPQGRTLNQAGVEELAT FT NENLVLICGRYEGVDERIIQSEVDEEWSIGDFVLTGGELPAMTLIDSVSRFVPGVLGDF FT ASAEEDSFADGLLDCPHYTRPEVLDGKEVPSVLKSGNHKDIARWRMKQSLGRTWLRRPE FT LLGNLALTDEQELLLAEFVREEHQQSK" FT misc_feature 723760..724359 FT /gene="trmD" FT /locus_tag="VSAL_I0651" FT /note="HMMPfam hit to PF01746, tRNA FT (Guanine-1)-methyltransferase, score 2.4e-81" FT /inference="protein motif:HMMPfam:PF01746" FT CDS 724487..724840 FT /transl_table=11 FT /gene="rplS" FT /locus_tag="VSAL_I0652" FT /old_locus_tag="TVS0494" FT /product="50S ribosomal protein L19" FT /db_xref="GOA:B6EGC2" FT /db_xref="InterPro:IPR001857" FT /db_xref="InterPro:IPR008991" FT /db_xref="InterPro:IPR018257" FT /db_xref="UniProtKB/Swiss-Prot:B6EGC2" FT /protein_id="CAQ78337.1" FT /translation="MSNIIKAIEDAQLKQDLPKFSPGDTVIVQVKVKEGERERLQAFEG FT VVIAIRNRGLHSAFTVRKISNGEGVERTFQTHSPIVNSIEVKRRGAVRRAKLYYLRERS FT GKSARIKEKLAKK" FT misc_feature 724490..724828 FT /gene="rplS" FT /locus_tag="VSAL_I0652" FT /note="HMMPfam hit to PF01245, Ribosomal protein L19,score FT 3.5e-73" FT /inference="protein motif:HMMPfam:PF01245" FT misc_feature 724742..724789 FT /gene="rplS" FT /locus_tag="VSAL_I0652" FT /note="PS01015 Ribosomal protein L19 signature." FT /inference="protein motif:ProSite:PS01015" FT CDS 725054..726127 FT /transl_table=11 FT /gene="aroF" FT /locus_tag="VSAL_I0653" FT /old_locus_tag="TVS0495" FT /product="phospho-2-dehydro-3-deoxyheptonate FT aldolase,Tyr-sensitive" FT /EC_number="2.5.1.54" FT /db_xref="GOA:B6EGC3" FT /db_xref="InterPro:IPR006218" FT /db_xref="InterPro:IPR006219" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:B6EGC3" FT /protein_id="CAQ78338.1" FT /translation="MKKSELSNINIIDEQVLITPQELKNKIPLSESARHFIQQSRQTIS FT NIIHKKDHRLLIVCGPCSIHDIDAAKEYAKRLKAISEELSDQLFIVMRVYFEKPRTTVG FT WKGLINDPHLDGSFDIEGGLHTARQLLVDLSEMGIPLATEALDPISPQYIGDTFSWAAI FT GARTTESQTHREMASGLSVPVGFKNGTDGSLSTSINAMQAAASGHRFMGINSEGQVALL FT TTQGNPNGHVILRGGKQTNYDSVSVAECEDELSKSNLDAALMIDCSHANSRKDYRRQPL FT VAEDAIHQIREGNKSIIGLMIESHLNEGNQPSDIPLSEMKYGVSITDACINWASTEALL FT RHTHEELIPVLEDRLKG" FT misc_feature 725129..726076 FT /gene="aroF" FT /locus_tag="VSAL_I0653" FT /note="HMMPfam hit to PF00793, DAHP synthetase I FT family,score 3.3e-156" FT /inference="protein motif:HMMPfam:PF00793" FT CDS 726134..727267 FT /transl_table=11 FT /gene="tyrA" FT /locus_tag="VSAL_I0654" FT /old_locus_tag="TVS0496" FT /product="T-protein [includes: chorismate mutase and FT prephenate dehydrogenase]" FT /EC_number="1.3.1.12" FT /db_xref="GOA:B6EGC4" FT /db_xref="InterPro:IPR002701" FT /db_xref="InterPro:IPR003099" FT /db_xref="InterPro:IPR008244" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR011277" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020822" FT /db_xref="UniProtKB/TrEMBL:B6EGC4" FT /protein_id="CAQ78339.1" FT /translation="MAVELSHLRDKIDAVDKQMLDLLAQRLQLVEQVGEVKSAYGLPIY FT DPSREAAMLASRREEAERKGVPPSLIEDILRRTMRESYSSENDSGFKCLRPELRPIVIV FT GGKGQLGGLFAKMFKLSGYDVRILGSKDWDNADVILEGVGMVVVTVPINLTIDVIGKLS FT MLPDDCILCDLTSIKQKPLEAMMKVHKGPVVGLHPMFGPDVPSLAKQVIVMCDGRGKDA FT YSWLKDQFEIWGAIVRDISASEHDKGMTLIQALRHFTSFAYGQHLSKENPDIEQLLNLS FT SPIYRLELLMVGRLFAQDPNLYADIILSSEENIEMIKRFHQRFGDAILLLENHNRVGFI FT ESFEEVETWFGDYAEQFLVESKGLLRQANDSIHRERN" FT misc_feature 726158..726400 FT /gene="tyrA" FT /locus_tag="VSAL_I0654" FT /note="HMMPfam hit to PF01817, Chorismate mutase type FT II,score 6.2e-32" FT /inference="protein motif:HMMPfam:PF01817" FT misc_feature 726443..727183 FT /gene="tyrA" FT /locus_tag="VSAL_I0654" FT /note="HMMPfam hit to PF02153, Prephenate FT dehydrogenase,score 4.8e-24" FT /inference="protein motif:HMMPfam:PF02153" FT CDS complement(727315..728328) FT /transl_table=11 FT /locus_tag="VSAL_I0655" FT /old_locus_tag="TVS0497" FT /product="putative membrane associated metallopeptidases" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR016047" FT /db_xref="UniProtKB/TrEMBL:B6EGC5" FT /protein_id="CAQ78340.1" FT /translation="MPDKIRISVSHNKGTRFFALSPKRKNMVILSLLLGISSFVFTCFG FT LHYFYQQQQLSKLAITHLQEQNKGLNKLIIDNNSNNHELTQQLETKEDELLVISQRIED FT VESVLGLQELSEDDSLLAEKTLEQRLDVAAIDSAVRATMFRLIPNDTPLNYTRESSSFG FT RRTNPISGKRQRHLGLDLTCKRGTEIYAPADGVIELARGSNKGYGNLLKVQHSFGFMTM FT YAHLQKFKVRSGQFVKKGDLIATCGNSGNSTGPHLHYEVRFLGRVLNPRSFIDWTPEKF FT DSLFEKERSVKWTPLVNVISNVVKLQLKLTQKPTIEQVEAINTVKAEQKNNQQLTQ" FT misc_feature complement(727519..727809) FT /locus_tag="VSAL_I0655" FT /note="HMMPfam hit to PF01551, Peptidase family M23, score FT 5.8e-46" FT /inference="protein motif:HMMPfam:PF01551" FT misc_feature complement(728179..728247) FT /locus_tag="VSAL_I0655" FT sig_peptide complement(728203..728328) FT /locus_tag="VSAL_I0655" FT CDS complement(728351..728716) FT /transl_table=11 FT /locus_tag="VSAL_I0656" FT /old_locus_tag="TVS0498" FT /product="putative signaling protein" FT /db_xref="GOA:B6EGC6" FT /db_xref="InterPro:IPR009875" FT /db_xref="UniProtKB/TrEMBL:B6EGC6" FT /protein_id="CAQ78341.1" FT /translation="MMIERRKFSRVVYQSSITLIQEIQQWKGSLIDLSLHGLLIQLSDH FT CEIELNNQVIAHFTLNDSDIHIIAECEIIQKTNNMLRLCISHIDIDSISHLKRLIELNV FT GNDELLLRQLSELTEPN" FT misc_feature complement(728411..728707) FT /locus_tag="VSAL_I0656" FT /note="HMMPfam hit to PF07238, PilZ domain, score 2.1e-15" FT /inference="protein motif:HMMPfam:PF07238" FT CDS complement(join(728827..729924,729921..730490)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0657" FT /old_locus_tag="TVS0499" FT /product="ABC transporter protein, ATP-binding component FT (pseudogene)" FT /note="Similar to Escherichia coli ABC transporter FT ATP-binding protein YjjK UniProt:P0A9W3 (554 aa) fasta FT scores: E()=1.3e-78, 79.009% id in 343 aa. CDS contains a FT frameshift after codon 192. The sequence has been checked FT and is believed to be correct" FT /db_xref="PSEUDO:CAQ78342.1" FT /inference="similar to sequence:UniProt:P0A9W3" FT misc_feature complement(728944..729450) FT /locus_tag="VSAL_I0657" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.4e-49" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(729406..729429) FT /locus_tag="VSAL_I0657" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(order(729790..729924,729921..730397)) FT /locus_tag="VSAL_I0657" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.5e-51" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(729960..730004) FT /locus_tag="VSAL_I0657" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(730353..730376) FT /locus_tag="VSAL_I0657" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 730675..732609 FT /transl_table=11 FT /gene="slt" FT /locus_tag="VSAL_I0658" FT /old_locus_tag="TVS0501" FT /product="soluble lytic murein transglycosylase precursor" FT /EC_number="3.2.1.-" FT /db_xref="GOA:B6EGC8" FT /db_xref="InterPro:IPR000189" FT /db_xref="InterPro:IPR008258" FT /db_xref="InterPro:IPR008939" FT /db_xref="InterPro:IPR012289" FT /db_xref="InterPro:IPR016026" FT /db_xref="InterPro:IPR023346" FT /db_xref="UniProtKB/TrEMBL:B6EGC8" FT /protein_id="CAQ78343.1" FT /translation="MKYSGHKLGMMAALCIGMSVHTAEALSIDESRVQYQEAKDLLTEK FT KFDEYKKVRASLDDYPLAPYLDYRELKMDLQAKTPDDIRLFRHAHQTLAIGNSLDYQYL FT VILGLNERWADFVDYFPQEPSSTNLQCYYYQAKNKLGDKKTAWKGAEKLWLTGSSVTYE FT CDDLFSAWSDAGKLTDELIIERMLLVYKARNNNLFSYLEKMLSSEKAKIQAKHIVELFN FT EPDSLNEYSAKNEATEFTKQLTLISIEREARKNPKKAIEMLPELVKKQQFSSDEHIAIK FT KRIVSSIMSTDSASLAAWRDTELETNPEDSFVERRIRVAIRAADWNDVSKWIGYLTPSA FT KKSLRWQFWIARIESEEGKQSAADARLKKLLGQRDFYSVAAANILGEPIQYSMDKASKN FT TKAVAGKYKNELNRIKELIAIDEISTAKSEWEYLLVRSSKKEVKELASYAAQHRWHHFT FT VLATIKGKMWGYLSLRFPIAHQWWFGHYSKELGLDKITLMSLSRQESALYAEAQSPVGA FT RGLMQIMPATAKYTAKKIDYDKYEGVSSLNNVDVNIHIGSNYLKGLLDDYDGNRIFALA FT GYNAGPHRVKRWRAVSNEKLDAYAFIEAIPFKETRGYVQNILMFETYYRSLLGEKGPFL FT SVKELNLEY" FT sig_peptide 730675..730740 FT /gene="slt" FT /locus_tag="VSAL_I0658" FT misc_feature 732115..732477 FT /gene="slt" FT /locus_tag="VSAL_I0658" FT /note="HMMPfam hit to PF01464, Transglycosylase SLT domain, FT score 2.1e-28" FT /inference="protein motif:HMMPfam:PF01464" FT misc_feature 732172..732258 FT /gene="slt" FT /locus_tag="VSAL_I0658" FT /note="PS00922 Prokaryotic transglycosylases signature." FT /inference="protein motif:ProSite:PS00922" FT CDS 732680..733006 FT /transl_table=11 FT /gene="trpR" FT /locus_tag="VSAL_I0659" FT /old_locus_tag="TVS0502" FT /product="trp operon repressor" FT /db_xref="GOA:B6EGC9" FT /db_xref="InterPro:IPR000831" FT /db_xref="InterPro:IPR010921" FT /db_xref="InterPro:IPR013335" FT /db_xref="UniProtKB/Swiss-Prot:B6EGC9" FT /protein_id="CAQ78344.1" FT /translation="MSGSAKYSDWSQVMALIANAAEQNKHQSLLTMLMTPDEREALMAR FT VNICHELLQGDLSQRQISQLLGVGVATITRGSNELKSHTDDEKAWLMEVLEVSAKSDQG FT ARKE" FT misc_feature 732701..732964 FT /gene="trpR" FT /locus_tag="VSAL_I0659" FT /note="HMMPfam hit to PF01371, Trp repressor protein,score FT 1.4e-37" FT /inference="protein motif:HMMPfam:PF01371" FT misc_feature 732848..732913 FT /gene="trpR" FT /locus_tag="VSAL_I0659" FT /note="Predicted helix-turn-helix motif with score FT 1443.000, SD 4.10 at aa 57-78, sequence FT LSQRQISQLLGVGVATITRGSN" FT CDS complement(732975..733496) FT /transl_table=11 FT /locus_tag="VSAL_I0660" FT /old_locus_tag="TVS0503" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR002786" FT /db_xref="UniProtKB/TrEMBL:B6EGD0" FT /protein_id="CAQ78345.1" FT /translation="MQKMNVIIASLNPAKINAVKAAFTLVFPDTTFSFEGVSVSSNVPD FT QPMSCTETKQGAINRINNAKQQHPNNRYYVGLEAGIEESSTFAWIIVDNGKKIGESRSS FT SLPLPPAIIVAVSAGKELGEVMDEQFNTDNIKQKGGAIGLLTNNLLTRSSVYQQALILA FT LIPFLHPDRF" FT misc_feature complement(732978..733475) FT /locus_tag="VSAL_I0660" FT /note="HMMPfam hit to PF01931, Protein of unknown function FT DUF84, score 1.4e-45" FT /inference="protein motif:HMMPfam:PF01931" FT CDS complement(733504..734679) FT /transl_table=11 FT /gene="pheA" FT /locus_tag="VSAL_I0661" FT /old_locus_tag="TVS0504" FT /product="P-protein (includes: chorismate mutase and FT prephenate dehydratase)" FT /EC_number="4.2.1.51" FT /db_xref="GOA:B6EGD1" FT /db_xref="InterPro:IPR001086" FT /db_xref="InterPro:IPR002701" FT /db_xref="InterPro:IPR008242" FT /db_xref="InterPro:IPR010952" FT /db_xref="InterPro:IPR018528" FT /db_xref="InterPro:IPR020822" FT /db_xref="UniProtKB/TrEMBL:B6EGD1" FT /protein_id="CAQ78346.1" FT /translation="MTDTHYSLDDIRLRLNDLDNELLKLFSERRKLSLKVAKSKVQTSK FT PVRDSKREQQLLVKLIKNGKAFDLDAHYITQIFHTIIEDSVLLQQEYFQNLANPELSRK FT PIARVAYLGSKGSYSNLASRRYFSKKNTELAELGCENFREVIKTVESGHADYGVLPIEN FT TSSGSINEVYDLLQHTSLYIVGELTQKIDHCLLTTSETSLEQITTLYSHPQPHQQCSEF FT LNRLDNVELISCSSTADAMIMVKDINSPTVAAIGNSDSGKLYSLQQLITNISNQTENQT FT RFIVVARKPVDVSEQIPAKTTLIMSTSQDAGSLVESLLVLRKYGINMTKLESRPIMGNP FT WEEMFYIDLEAHLKSDAMNSAIEELTSITQYLKVLGCYPIENVTPTTIPLT" FT misc_feature complement(733675..733698) FT /gene="pheA" FT /locus_tag="VSAL_I0661" FT /note="PS00858 Prephenate dehydratase signature 2." FT /inference="protein motif:ProSite:PS00858" FT misc_feature complement(733807..734355) FT /gene="pheA" FT /locus_tag="VSAL_I0661" FT /note="HMMPfam hit to PF00800, Prephenate dehydratase,score FT 1.3e-70" FT /inference="protein motif:HMMPfam:PF00800" FT misc_feature complement(733822..733890) FT /gene="pheA" FT /locus_tag="VSAL_I0661" FT /note="PS00857 Prephenate dehydratase signature 1." FT /inference="protein motif:ProSite:PS00857" FT misc_feature complement(734404..734646) FT /gene="pheA" FT /locus_tag="VSAL_I0661" FT /note="HMMPfam hit to PF01817, Chorismate mutase type FT II,score 2.5e-28" FT /inference="protein motif:HMMPfam:PF01817" FT CDS complement(734792..735154) FT /transl_table=11 FT /gene="raiA" FT /locus_tag="VSAL_I0662" FT /old_locus_tag="TVS0505" FT /product="ribosome-associated inhibitor A" FT /db_xref="GOA:B6EGD2" FT /db_xref="InterPro:IPR003489" FT /db_xref="UniProtKB/TrEMBL:B6EGD2" FT /experiment="The expressed protein is found to be exported FT (extracellular) by Aliivibrio salmonicida" FT /protein_id="CAQ78347.1" FT /translation="MKVEITGNNIDITPGIRERIEGKFKKLEEKRHLDIIGRHASVTKR FT SNGKHKVEAYVTIAGGKVAASAEQEDLFGTIREMYQKLERQLDKLQHKSEARRATHAQA FT PVVEEPEVELEDEYEQ" FT misc_feature complement(734864..735151) FT /gene="raiA" FT /locus_tag="VSAL_I0662" FT /note="HMMPfam hit to PF02482, Sigma 54 modulation protein FT / S30EA r, score 1.6e-18" FT /inference="protein motif:HMMPfam:PF02482" FT CDS complement(735514..736281) FT /transl_table=11 FT /locus_tag="VSAL_I0663" FT /old_locus_tag="TVS0506" FT /product="outer membrane protein" FT /db_xref="GOA:B6EGD3" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR017689" FT /db_xref="UniProtKB/TrEMBL:B6EGD3" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ78348.1" FT /translation="MDNLSFFIQGSFSSMKRLTLSSLLAVSLLVGCSSSDDVIPDIPPS FT ELYSQAQISLQAGNWTSAVERLEALDSRYPFGAYSEQVQLDLIYVYYKNDDLALGLATI FT ERFNRLNPTNPKADWVLYMRGLTHMAQDRSFMHDLFRVNRSDRDPEPARSAFKDFKRLL FT ERYPDSLYAEDAQTRMFALKNRLADYELATADFYLRREAWISAINRSQELQRTYPDTEA FT ARKSLTIMLSAYKELKLDDAIQRTEELIALNPQ" FT misc_feature complement(736072..736101) FT /locus_tag="VSAL_I0663" FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT /inference="protein motif:ProSite:PS00339" FT misc_feature complement(736075..736140) FT /locus_tag="VSAL_I0663" FT /note="Predicted helix-turn-helix motif with score FT 1086.000, SD 2.89 at aa 81-102, sequence FT YSQAQISLQAGNWTSAVERLEA" FT sig_peptide complement(736177..736281) FT /locus_tag="VSAL_I0663" FT misc_feature complement(736186..736218) FT /locus_tag="VSAL_I0663" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 736402..737376 FT /transl_table=11 FT /gene="rluD" FT /locus_tag="VSAL_I0664" FT /old_locus_tag="TVS0507" FT /product="ribosomal large subunit pseudouridine synthase D" FT /EC_number="5.4.99.-" FT /db_xref="GOA:B6EGD4" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR006145" FT /db_xref="InterPro:IPR006224" FT /db_xref="InterPro:IPR006225" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/TrEMBL:B6EGD4" FT /protein_id="CAQ78349.1" FT /translation="MAQQIELTSTVKDSQLGQRLDQAAAELFSDFSRSRIKEWVLAGSI FT SVNGEVITKARVKMMGGEEIVVKAELEDEERWLAQDIPLEIVYEDDDILVINKPRDLVV FT HPGAGTPDGTILNALLFHYPSIAEVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVRALQ FT KRKITREYEAIVLGRMTAGGMIEKPIGRHPQKRTLMAVHELGKDAVTHYRVAEHFRIHT FT RLRLRLETGRTHQIRVHMSFLQHPLVGDTAYGGRARIPKGASQELIDMIRGFNRQALHA FT AMLRFDHPITGEVMEFHAPIPDDIIALAQALRDDERLLHEEEY" FT misc_feature 736453..736596 FT /gene="rluD" FT /locus_tag="VSAL_I0664" FT /note="HMMPfam hit to PF01479, S4 domain, score 3e-06" FT /inference="protein motif:HMMPfam:PF01479" FT misc_feature 736675..737127 FT /gene="rluD" FT /locus_tag="VSAL_I0664" FT /note="HMMPfam hit to PF00849, RNA pseudouridylate FT synthase, score 3.9e-66" FT /inference="protein motif:HMMPfam:PF00849" FT misc_feature 736804..736848 FT /gene="rluD" FT /locus_tag="VSAL_I0664" FT /note="PS01129 Rlu family of pseudouridine synthase FT signature." FT /inference="protein motif:ProSite:PS01129" FT CDS 737376..738110 FT /transl_table=11 FT /locus_tag="VSAL_I0665" FT /old_locus_tag="TVS0509" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003730" FT /db_xref="InterPro:IPR011324" FT /db_xref="UniProtKB/TrEMBL:B6EGD5" FT /protein_id="CAQ78350.1" FT /translation="MSILSPKWSAPKNINVVSTTRVGGVSKAPFTSFNLGDHVGDNSND FT VVLNREKLITLAQLPTAPTWLSQIHSTMVITLPISSEEINSPLVDASYTNQANQVCCVM FT TADCLPVVICNREGTEVAAAHAGWRGLLDGILENTVKHFSSNDLIAWCGPAIGPTAFEV FT GDEVKQLFCEKDPQAINAFTPSHNSNKWFANLNLLATQRLQSVGVQDIYYSNFCTYSNT FT DQFFSYRKEGSTGRQATLIWFE" FT misc_feature 737457..738107 FT /locus_tag="VSAL_I0665" FT /note="HMMPfam hit to PF02578, Uncharacterised ACR, YfiH FT family COG1496, score 1.3e-69" FT /inference="protein motif:HMMPfam:PF02578" FT CDS 738205..740790 FT /transl_table=11 FT /gene="clpB" FT /locus_tag="VSAL_I0666" FT /old_locus_tag="TVS0510" FT /product="chaperone ClpB (heat-shock protein)" FT /db_xref="GOA:B6EGD6" FT /db_xref="InterPro:IPR001270" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR004176" FT /db_xref="InterPro:IPR013093" FT /db_xref="InterPro:IPR017730" FT /db_xref="InterPro:IPR018368" FT /db_xref="InterPro:IPR019489" FT /db_xref="InterPro:IPR023150" FT /db_xref="UniProtKB/TrEMBL:B6EGD6" FT /protein_id="CAQ78351.1" FT /translation="MRLDRFTSKFQIAISDAQSLALGQDHQYIEPTHLMVALLNQNGST FT IRPLLTLLNVDVTQLRSKLTEILDKAPKVIGIGGDVQLSSNMGVIFNLCDKIAQKRKDT FT YISSEIFMLAAIEDKGPLGHLLKESGLTEAKISKSIDEIRGGEKVNDPNAEEKRQALEK FT FTIDLTEQAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTAIVEGLAQR FT IINGEVPEGLKHKRVLSLDIGSLIAGAKFRGEFEERLKAVLNELAKEEGNIILFIDEVH FT TMVGAGKGEGSMDAGNMLKPALARGDLHCVGATTLDEYRKYIEKDPALERRFQKVIVDE FT PTVEDTIAILRGLKERYEIHHHVEITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAAS FT SIRMEIDSKPESLDKLERKIIQLKIEQQALVKESDDASLKRLDSLNLELREKERDYSEL FT EEIWKAEKAALSGTQHIKTELDIARSNMDIARRAGDLNRMSELQYGRIPELEKQLDLAA FT QAEMQEMSLLKNKVTDAEIAEVLSRQTGIPVNKMLEGERDKLLKMEAMLHHRVIGQDEA FT VEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFMFDSEDAMVRIDMS FT EFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVL FT DDGRLTDGQGRTVDFKNTVIIMTSNLGSEKIQQHFGELDYGGIKELVMDVVGQHFRPEF FT LNRVDEAVVFHPLGQENIKSIAKIQLQRLEKRLNEKDYQLKVSNEALTLISEAGFDPVY FT GARPLKRAIQTYIENPLAQDILSGKLRTGEEIKLKVRNGQLIATQNDDF" FT misc_feature 738253..738411 FT /gene="clpB" FT /locus_tag="VSAL_I0666" FT /note="HMMPfam hit to PF02861, Clp amino terminal FT domain,score 3.4e-14" FT /inference="protein motif:HMMPfam:PF02861" FT misc_feature 738484..738639 FT /gene="clpB" FT /locus_tag="VSAL_I0666" FT /note="HMMPfam hit to PF02861, Clp amino terminal FT domain,score 8e-13" FT /inference="protein motif:HMMPfam:PF02861" FT misc_feature 738805..739389 FT /gene="clpB" FT /locus_tag="VSAL_I0666" FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellul, score 1.1e-10" FT /inference="protein motif:HMMPfam:PF00004" FT misc_feature 738820..738843 FT /gene="clpB" FT /locus_tag="VSAL_I0666" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 739084..739122 FT /gene="clpB" FT /locus_tag="VSAL_I0666" FT /note="PS00870 Chaperonins clpA/B signature 1." FT /inference="protein motif:ProSite:PS00870" FT misc_feature 739990..740484 FT /gene="clpB" FT /locus_tag="VSAL_I0666" FT /note="HMMPfam hit to PF07724, ATPase family associated FT with various cellul, score 1.7e-112" FT /inference="protein motif:HMMPfam:PF07724" FT misc_feature 740002..740499 FT /gene="clpB" FT /locus_tag="VSAL_I0666" FT /note="HMMPfam hit to PF07728, ATPase family associated FT with various cellul, score 1.3e-05" FT /inference="protein motif:HMMPfam:PF07728" FT misc_feature 740017..740040 FT /gene="clpB" FT /locus_tag="VSAL_I0666" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 740095..740151 FT /gene="clpB" FT /locus_tag="VSAL_I0666" FT /note="PS00871 Chaperonins clpA/B signature 2." FT /inference="protein motif:ProSite:PS00871" FT rRNA 741262..742798 FT /locus_tag="VSAL_I3136r" FT /product="16S ribosomal RNA" FT tRNA 742871..742943 FT /locus_tag="VSAL_I3137t" FT /product="transfer RNA-Ala" FT rRNA 743221..746110 FT /locus_tag="VSAL_I3138r" FT /product="23S ribosomal RNA" FT rRNA 746204..746323 FT /locus_tag="VSAL_I3139r" FT /product="5S ribosomal RNA" FT tRNA 746419..746492 FT /locus_tag="VSAL_I3140t" FT /product="transfer RNA-Asp" FT tRNA 746534..746607 FT /locus_tag="VSAL_I3141t" FT /product="transfer RNA-Trp" FT CDS complement(746868..747275) FT /transl_table=11 FT /locus_tag="VSAL_I0667" FT /old_locus_tag="TVS0511" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR001120" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:B6EGD7" FT /protein_id="CAQ78352.1" FT /translation="MIYKQKGFSLLEIMISFTIIGIGALGLLKLQTFIELKSEHATRSI FT EALYSAETQLEKFRSRSISGAGGTITYDSIATSSNEVTINDITYMLTWNVDSIISASAK FT HITISSAWNTRHGNQEFVTLETIISKYNEFD" FT misc_feature complement(747189..747260) FT /locus_tag="VSAL_I0667" FT /note="HMMPfam hit to PF07963, Prokaryotic N-terminal FT methylation motif, score 1.1e-05" FT /inference="protein motif:HMMPfam:PF07963" FT misc_feature complement(747192..747257) FT /locus_tag="VSAL_I0667" FT misc_feature complement(747198..747260) FT /locus_tag="VSAL_I0667" FT /note="PS00409 Prokaryotic N-terminal methylation site." FT /inference="protein motif:ProSite:PS00409" FT CDS complement(747265..748509) FT /transl_table=11 FT /locus_tag="VSAL_I0668" FT /old_locus_tag="TVS0512" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EGD8" FT /protein_id="CAQ78353.1" FT /translation="MNIEKQNGAVVLIMTSLLILAALILSLGTYKSTFYQIKRSQNEVI FT AKQSNWKAEGAIECLFSFISESKTEPSLLSKNNTSTEYSNMNTQCNINNPMESLYAQPV FT SSANSAITYQLTYELNEKELIKKNIIPKITYGNGAIQARGNLIIDGSLNVYPDVTGHKI FT NEKDECVAIKYSGYIDYRFSGSGLKTLNPEENGPYDGYSGTCHSTTQSNIQTNSKTDDS FT ATSGNFLSDYIKEEHYDPFEPFFQKPRSKLSEVKNEYTVISGNKSNCDSSIATAFATSD FT KVWVEGNCDLGDGHSLTSLTDKSRNLVIEDGVFGVYGAVNFYGSVYHMYHHPIGTDLTD FT NWDGMVSSNTLATNDKKTVSHFQAGAFIPTGGLILDIPNSSALLRGAIVFNYKRSARKE FT EYNNFTWQKGSWNDL" FT sig_peptide complement(748417..748509) FT /locus_tag="VSAL_I0668" FT misc_feature complement(748423..748491) FT /locus_tag="VSAL_I0668" FT CDS complement(748509..749141) FT /transl_table=11 FT /locus_tag="VSAL_I0669" FT /old_locus_tag="TVS0513" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EGD9" FT /protein_id="CAQ78354.1" FT /translation="MGSSMDIIPVHKYKQNGSSLIELLIASFIGIIAISLVGSIFINGQ FT RVAKNRGLELLLAQNLTSTMQIIKNDIQRAGYNGTDGQSVKLSAATNIIEITPNSIGFV FT YHKKLSGAQKTYQNVIYKYSPSDKKLKVCEEETLITNIKSLTTVSNCYSLFDTQNIQVT FT NFSVLRKPLITSSATSSIIDIRLDTELVNIPTMKKDLSFSVKQRNWQ" FT misc_feature complement(749016..749084) FT /locus_tag="VSAL_I0669" FT CDS complement(749107..749622) FT /transl_table=11 FT /locus_tag="VSAL_I0670" FT /old_locus_tag="TVS0514" FT /product="putative membrane protein" FT /note="Similar to Pseudomonas aeruginosa Type 4 fimbrial FT biogenesis protein FimU UniProt:Q59652 (168 aa) fasta FT scores: E()=5.2e-05, 31.447% id in 159 aa" FT /db_xref="InterPro:IPR001120" FT /db_xref="InterPro:IPR012902" FT /db_xref="InterPro:IPR016824" FT /db_xref="UniProtKB/TrEMBL:B6EGE0" FT /inference="similar to sequence:UniProt:Q59652" FT /protein_id="CAQ78355.1" FT /translation="MNRGFTLLEMLITITVLAILLSVAAPNFNTVNNSVKMQRLATELN FT GFLIQAKSEAVLRNSDLWVHISFPKKEENKIGSWNLALRDSTSTSGNMVAYLDGTNFSD FT ITLKHTYAHKKTKFEGIRGRPASGSFTFYPNTDTKKVLKVVLSNPPGRIKVCYDNTSGE FT LYGYNSCS" FT misc_feature complement(749527..749595) FT /locus_tag="VSAL_I0670" FT misc_feature complement(749545..749616) FT /locus_tag="VSAL_I0670" FT /note="HMMPfam hit to PF07963, Prokaryotic N-terminal FT methylation motif, score 1.3e-08" FT /inference="protein motif:HMMPfam:PF07963" FT sig_peptide complement(749551..749622) FT /locus_tag="VSAL_I0670" FT misc_feature complement(749554..749616) FT /locus_tag="VSAL_I0670" FT /note="PS00409 Prokaryotic N-terminal methylation site." FT /inference="protein motif:ProSite:PS00409" FT CDS 749726..750157 FT /transl_table=11 FT /locus_tag="VSAL_I0671" FT /old_locus_tag="TVS0515" FT /product="putative membrane protein" FT /note="Similar to Pseudomonas aeruginosa Type 4 fimbrial FT biogenesis protein PilE UniProt:Q60148 (141 aa) fasta FT scores: E()=4.6e-08, 32.168% id in 143 aa" FT /db_xref="GOA:B6EGE1" FT /db_xref="InterPro:IPR000983" FT /db_xref="InterPro:IPR001120" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:B6EGE1" FT /inference="similar to sequence:UniProt:Q60148" FT /protein_id="CAQ78356.1" FT /translation="MILINKCNLSRVHIRGMTLIEIMIVIAIIGLLSAIAYPAYTNHIL FT KANRIVALADMAKIQLELETKYITNYSDIASSIVSGGTCSFCETQSDKYTLSLEGLTAT FT TYTIKATPIKAQIKDTCSGKTYTAITLNQFNKSEPKECW" FT misc_feature 749768..749839 FT /locus_tag="VSAL_I0671" FT /note="HMMPfam hit to PF07963, Prokaryotic N-terminal FT methylation motif, score 3.8e-09" FT /inference="protein motif:HMMPfam:PF07963" FT misc_feature 749768..749830 FT /locus_tag="VSAL_I0671" FT /note="PS00409 Prokaryotic N-terminal methylation site." FT /inference="protein motif:ProSite:PS00409" FT misc_feature 749780..749848 FT /locus_tag="VSAL_I0671" FT CDS complement(750194..751345) FT /transl_table=11 FT /locus_tag="VSAL_I0672" FT /old_locus_tag="TVS0516" FT /product="putative chromate transporter" FT /db_xref="GOA:B6EGE2" FT /db_xref="InterPro:IPR003370" FT /db_xref="InterPro:IPR014047" FT /db_xref="UniProtKB/TrEMBL:B6EGE2" FT /protein_id="CAQ78357.1" FT /translation="MFEIFNRFFLLGWVSFGGPAAHIGYFRNEFVQKRGWISEEEYAQL FT IALSQFLPGPGSSQVGFALGYHRKGLFGALLASIGFTLPSILIMVLLANISHSFFGNDI FT FEGIIHGLKLLAVVVVADAIMGMYKSFCKDKITILLCIMTATLLLILPSISTQLIALLI FT AAIIGRIYLKSDKVTEIKKESKGINWLPLIIFALCFFALPAIVNHSPLLLLFSDFFQAG FT SLVFGGGHVVLPLLQNIVGDQISTDSFLTGYAAAQAVPGPMFTFATFLGYELWSEQPIL FT GALVATIAIFLPGFSLVLGVFSHWQVLAQKPALAGAITGINASVVGLLIAALYDPVFTS FT AVGSGVDMALVIIGFALLKVLKLPIVGLVGFFIAAGGMLPFVG" FT misc_feature complement(order(750200..750253,750272..750337, FT 750347..750406,750440..750508,750536..750604, FT 750623..750691,750719..750787,750845..750940, FT 750968..751036,751070..751138,751268..751327)) FT /locus_tag="VSAL_I0672" FT misc_feature complement(750200..750721) FT /locus_tag="VSAL_I0672" FT /note="HMMPfam hit to PF02417, Chromate transporter, score FT 2.5e-08" FT /inference="protein motif:HMMPfam:PF02417" FT misc_feature complement(750827..751345) FT /locus_tag="VSAL_I0672" FT /note="HMMPfam hit to PF02417, Chromate transporter, score FT 3.5e-25" FT /inference="protein motif:HMMPfam:PF02417" FT CDS join(751404..751460,751464..752387) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0673" FT /old_locus_tag="TVS0517" FT /product="HTH-type transcriptional regulator, LysR family FT (pseudogene)" FT /note="Similar to Pseudomonas aeruginosa MexT protein FT UniProt:O87785 (304 aa) fasta scores: E()=8.4e-21, 29.930% FT id in 284 aa. CDS contains a nonsense mutation (GAA or GAG FT to TAA) after codon 19. The sequence has been checked and FT is believed to be correct" FT /inference="similar to sequence:UniProt:O87785" FT misc_feature 751500..751664 FT /locus_tag="VSAL_I0673" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 1.2e-15" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature 751737..752360 FT /locus_tag="VSAL_I0673" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 1.1e-17" FT /inference="protein motif:HMMPfam:PF03466" FT CDS complement(752403..752591) FT /transl_table=11 FT /locus_tag="VSAL_I0674" FT /old_locus_tag="TVS0518" FT /product="putative membrane protein" FT /db_xref="GOA:B6EGE3" FT /db_xref="InterPro:IPR000612" FT /db_xref="UniProtKB/TrEMBL:B6EGE3" FT /protein_id="CAQ78359.1" FT /translation="MRLLLALLLPWLQFFTIGRPFSGVICLILQLTLIGWIPAAIWSVY FT ALSQYNTDEKIKDAFGR" FT misc_feature complement(752466..752534) FT /locus_tag="VSAL_I0674" FT CDS complement(752758..753810) FT /transl_table=11 FT /gene="dapD" FT /locus_tag="VSAL_I0675" FT /old_locus_tag="TVS0519" FT /product="tetrahydrodipicolinate succinylase" FT /EC_number="2.3.1.117" FT /note="Large N-terminal truncation of around 110 amino acid FT residues compared with the Corynebacterium glutamicum FT orthologue" FT /db_xref="GOA:B6EGE4" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR019876" FT /db_xref="UniProtKB/TrEMBL:B6EGE4" FT /protein_id="CAQ78360.1" FT /translation="MKMENHYMAHFALAFGTATKNRDNKIIEAFFPHPVLNPSESLVNA FT IAKASGYTEGNQAIEITSEVCTELANAFAANGDVPNAAFAEKAVQSKQPLVLVVLATDE FT QSQSVAEGFLKLQLISNRLVKPHGTVLDGIFGLLHNIAWTNQGPIDLPELADRQIEARL FT AGDTLTVDCVDKFPKMVDYVVPTGIRIADTSRVRLGAHVGKGTTVMHEGFINFNAGTTG FT VSMVEGRISAGVVVGNGSDIGGGASIMGTLSGGGKMVISIGENCLLGANAGLGFPMGDR FT CTIESGLYVTAGTKVSMLDNQGKEVEVAKARDLAGKTDLLFRRNSITGQIECLTNKSAI FT ELNSELHSNN" FT misc_feature complement(752857..752880) FT /gene="dapD" FT /locus_tag="VSAL_I0675" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(752983..753036) FT /gene="dapD" FT /locus_tag="VSAL_I0675" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 21" FT /inference="protein motif:HMMPfam:PF00132" FT misc_feature complement(753061..753114) FT /gene="dapD" FT /locus_tag="VSAL_I0675" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 0.83" FT /inference="protein motif:HMMPfam:PF00132" FT misc_feature complement(753199..753252) FT /gene="dapD" FT /locus_tag="VSAL_I0675" FT /note="HMMPfam hit to PF00132, Bacterial transferase FT hexapeptide (three rep, score 1.1e+02" FT /inference="protein motif:HMMPfam:PF00132" FT CDS complement(754187..754477) FT /transl_table=11 FT /locus_tag="VSAL_I0676" FT /old_locus_tag="TVS0520" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009813" FT /db_xref="UniProtKB/TrEMBL:B6EGE5" FT /protein_id="CAQ78361.1" FT /translation="MAVIVKYVVERNGEEKMTFTSKTEADAYDKMLDVADELFTLLNES FT NLIEDEGKQEELSLYLAKHKEDVLVALGAKRKPVPKKAKIEAVKDEESDAA" FT misc_feature complement(754253..754477) FT /locus_tag="VSAL_I0676" FT /note="HMMPfam hit to PF07130, YebG protein, score 1.4e-41" FT /inference="protein motif:HMMPfam:PF07130" FT CDS 754689..755327 FT /transl_table=11 FT /locus_tag="VSAL_I0677" FT /old_locus_tag="TVS0521" FT /product="putative membrane protein" FT /db_xref="GOA:B6EGE6" FT /db_xref="InterPro:IPR002680" FT /db_xref="UniProtKB/TrEMBL:B6EGE6" FT /protein_id="CAQ78362.1" FT /translation="MMSDFELKHKATTKMSERIAYKITQCLKFLLNIFYGSQYAKRAVI FT LETIAAVPGMVAGMFNHLKALRRMKDDEGWIRELLNEAENERMHLMIFLDIAKPRWIER FT TLVLLGQGVFMVVYSFIYLLSSKVAHRVVGYFEEEACKSYTEYLSKIDNGDVENEAAPQ FT IAIDYYQLPNDALLRDVILKIRDDEAKHRDRNHSFADAYENHDLPAHQR" FT misc_feature 754689..755312 FT /locus_tag="VSAL_I0677" FT /note="HMMPfam hit to PF01786, Alternative oxidase, score FT 6.3e-63" FT /inference="protein motif:HMMPfam:PF01786" FT misc_feature order(754815..754868,754989..755057) FT /locus_tag="VSAL_I0677" FT CDS complement(755360..756235) FT /transl_table=11 FT /locus_tag="VSAL_I0678" FT /old_locus_tag="TVS0522" FT /product="HTH-type transciptional regulator, LysR-family" FT /db_xref="GOA:B6EGE7" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EGE7" FT /protein_id="CAQ78363.1" FT /translation="MRISLKQLNVFTAIAQEKTMTKAAERLFITKPAVSLSLSELEKNL FT GYKVFDRVNNRLVLNSEGRQLLPLADELLERAEAIEHQFTADSQLTGSLNIGASDTIGN FT HIAPVLLSKFQQQHPCDIQQLFISNTAQIINRLLEFKLDIGLVEGKAHHPKLNMIEWQQ FT DDMYIVCAPSHPLAMQNIITLEDLEHSTWLLREEGSGSREYFLNHIASNLNDWHESLQL FT HTTEAIINCCSENMGLACLSQLAAQNSINDGRLVQLPYEKKLTRPYWLLVHKEKYQTPL FT LQYFMTFIQR" FT misc_feature complement(755363..755977) FT /locus_tag="VSAL_I0678" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 3.2e-40" FT /inference="protein motif:HMMPfam:PF03466" FT misc_feature complement(756044..756223) FT /locus_tag="VSAL_I0678" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 2.5e-15" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature complement(756089..756181) FT /locus_tag="VSAL_I0678" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature complement(756119..756184) FT /locus_tag="VSAL_I0678" FT /note="Predicted helix-turn-helix motif with score FT 1166.000, SD 3.16 at aa 18-39, sequence FT KTMTKAAERLFITKPAVSLSLS" FT CDS 756371..757360 FT /transl_table=11 FT /locus_tag="VSAL_I0679" FT /old_locus_tag="TVS0523" FT /product="putative C4-dicarboxylate/malic acid transport FT protein" FT /db_xref="GOA:B6EGE8" FT /db_xref="InterPro:IPR004695" FT /db_xref="UniProtKB/TrEMBL:B6EGE8" FT /protein_id="CAQ78364.1" FT /translation="MLNYTKQKVVGAPTPMAGLALGIASLGWCWENALPFHGYAQWISA FT AIASVLLLVLAIKFLLHPAVLWSELAHPVVGSVAPTFAMGTMVVSSSVGHFYPAAGDAL FT WLAAIALHLIFLISFIYHRAKDFELHHMVPSWFVPPVGLVVADVSFSGNPTLAPVAHWI FT LMFGLIIYAIMLPIMIYRLMFCHEIPDAAKPTIAIMAAPASLSLAGYLTVTASPSPVII FT ALLFGIAVLMTSVIYMAFFKLMRLPFSPGYAAFTFPMVIGATALFKTANWMLSQGVVAD FT YVYQVRMLAVVELVVATCVVSYVAVHYLAHYRPITRMVNRLANPKHAH" FT misc_feature order(756395..756460,756494..756562,756590..756658, FT 756677..756736,756854..756922,756956..757015, FT 757025..757093,757112..757171,757235..757303) FT /locus_tag="VSAL_I0679" FT misc_feature 756410..757165 FT /locus_tag="VSAL_I0679" FT /note="HMMPfam hit to PF03595, C4-dicarboxylate FT transporter/malic aci, score 3.2e-77" FT /inference="protein motif:HMMPfam:PF03595" FT CDS 757441..760824 FT /transl_table=11 FT /gene="recC" FT /locus_tag="VSAL_I0680" FT /old_locus_tag="TVS0524" FT /product="exodeoxyribonuclease V gamma chain" FT /EC_number="3.1.11.5" FT /db_xref="GOA:B6EGE9" FT /db_xref="InterPro:IPR006697" FT /db_xref="InterPro:IPR011335" FT /db_xref="UniProtKB/TrEMBL:B6EGE9" FT /protein_id="CAQ78365.1" FT /translation="MFTVYHSNQLDVLKSLVVELIRLNPLDNPFEQEQILVQSPGMSQW FT LKIELAKELGIAANLTFPLPATFIWDLFTQVLDDVPKRSAFNKEAMTWKIVTLLPELLK FT QDEFAPLQRYLENDDKQLKCYQLAAKIADIFDQYLVFRPEWIQKWEAGEEVIELEGEHP FT WQPILWQALYDQTLALGHSPYHRANMFEHFIETLENYLQTGTLPKGMPKRLFVVGITSL FT PPRYLDALAALGQHIDVHLMFTNPCQHYWGDLRDNKYLAKLDRQNRIAKRLSSDLSTLE FT NDDSDLFTNKSENSLLASWGKLGRDNFQLLLDLEPNEYKIFVPTGREDLLHSIQSDILN FT LEERSRDDVLDNSEHKQPISPDDRSILLHSCHSPMREVEVLHDQLLDMFANDPELKPRD FT IIVMVADINVYSAAIQAVFGNAAFDRYIPFAISDQSAEQENPVLLAFMNLMALPENRCG FT LSELLSLLEVPAVMSRFKFNAEQFEIVKRWAEETGIRWGLDNSTSAHFDLPEHNQNSWL FT FGIQRMLLGYAMEQDAGLFEGMASYEQVQGMNAEIAGNLAHFIDQLLTYQITLGQAQKI FT NAWRTIINQLMDDFLLVELEGELVVKSIRDQLQKLEENLEDAGFDAPISAPIINNYLKN FT NLSGGKASQRFLAGKVNFCTLMPMRSIPFDVICLLGMTDGSYPRTMPVEGFDLMQKRMK FT PGDRSRRDDDRYLFLEALQSANKAFYLSYIGRSIRDNTEKAPSVLVSELLEYCQQSYCL FT DGDSELNPEESAKHLVKKLTIEHPLVPYSQQSFVGDNTSYASEWLPTAKLEGQAAPEFQ FT TEPLVFAPESKELELTELQRFWRLPVAYFFNRGLKVFFETVESRVEDDEPFSIDGRTGY FT GMKSELLEELLAYDDPNQVFQLSREFYQQQKAQGKLPIGSFGEIAADKEVNTVKELVDH FT IQPLTTSPLEDQEVRLRFTFPHGEMELQGWLKQRYKEGMLRYRGGKIRSHEVLATWIDH FT LCLCAMKQQQFTHLFGTDAIYHFEPIETEKAYQHLEVILSLYISGNCAPLPYLPKAALA FT GLEAHIDKKGVWNDDDETHEKALKKMADEYSGTRYAGENSNDYVMRMWPEWNDELGQTI FT FDNAKNVLHDALLHSEKEKL" FT misc_feature 757441..760812 FT /gene="recC" FT /locus_tag="VSAL_I0680" FT /note="HMMPfam hit to PF04257, Exodeoxyribonuclease V,gamma FT subunit, score 0" FT /inference="protein motif:HMMPfam:PF04257" FT misc_feature 757579..757608 FT /gene="recC" FT /locus_tag="VSAL_I0680" FT /note="PS00304 Small, acid-soluble spore FT proteins,alpha/beta type, signature 1." FT /inference="protein motif:ProSite:PS00304" FT CDS 761158..764784 FT /transl_table=11 FT /gene="recB" FT /locus_tag="VSAL_I0681" FT /old_locus_tag="TVS0525" FT /product="exodeoxyribonuclease V beta chain" FT /EC_number="3.1.11.5" FT /db_xref="GOA:B6EGF0" FT /db_xref="InterPro:IPR000212" FT /db_xref="InterPro:IPR004586" FT /db_xref="InterPro:IPR011335" FT /db_xref="InterPro:IPR011604" FT /db_xref="InterPro:IPR014016" FT /db_xref="InterPro:IPR014017" FT /db_xref="UniProtKB/TrEMBL:B6EGF0" FT /protein_id="CAQ78366.1" FT /translation="MTTIAAPNQLNAMTFPLHGTRLIEASAGTGKTFTIASLYLRLLLG FT HGDENSRHSEELTVDKILVVTFTEAATAELRERIRAKIHDARLAFARAVHKSDYKSGDP FT VIDPLLAAISDHKSAAHILLNAERSMDEASIFTIHGFCQRMLTQNAFESGAQFESEFVT FT DQAKLMHQVAADFWRRSFYHLPKMVAESVYDCWPSPSALLGDMGNSLTGVPKHLTVEPL FT EKSLEDFCQQGIARIDELKKQWSEHCVDFEALISGSGVDKRSYTKKNLPNWLDQVSIWA FT SNPTTSLQIHDKLEKFSQSLLIDKTKKGEAPEHAVFKLIDDFLAQPLEIKQPLLSLAIH FT KCRETLQQAKEQKNWLSFDDLLTQLSAATKNQENALLLEKIREQYPIALIDEFQDTDPL FT QYSIFNTIYQDQSQCGLFMIGDPKQAIYAFRGADIFTYIQARRQVADHYTLDTNWRSTA FT DMVSSVNRIFEHGKQPFLYDDDIPFYPVKYNPINAEQKSWSLDNQTQPAMTFWLQESKD FT GNPINKGNYQRVMAESTAAQIQTILTGSQQGSAHLQNGEKKEAIKAGNIAVLVRTGKEG FT KLVREALSKQGIASVYLSNRDSVFSSPLAKDILRLLQAAMTPTDARAVRSALASSLFAY FT TADQLHQFNVDEMQWELAVNEFRTYRKHWLQRGIMPMLHQIITQQGISERLLAENGGER FT HLTDLLHIGELLQQTSQTLDSDYGLLRWLSDAISEPNGDAEEQTVRLESERNLVQIVTI FT HKSKGLEYDLVFLPFVCSYRAVDKKGEVSFYDEDNRYSVLDLLKEDESVEKAEKERLAE FT DLRLIYVALTRAVYACYIGMAPIGKGTSKKPPTGVHLSGLGYLIQQADECDIAELQACL FT EKLIAGNSPMVIQSPQTLSDVLYKETEDNLFALTANKLSKPVKSNWWMTSYSGLVKQGN FT HHNDSSLELINLDVDSAEDKDDKELDLEPERTIFTFPRGARAGTFLHSLFEEVEFTQPI FT NSEENTQIIIKLLEKENYDVEWLDVVQSMMQRVLDCPLDGHDLRLATKGPTQRLVEMEF FT LLPITLLNSSLVNKTIAKHDEVSARAGELGFSTVSGMLKGFIDLVFEHEGKYYVLDWKS FT NHLGDSPECYGGDALIEAMRDHRYDFQYQLYALALHRFLKSRIADYNYDTHFGGAYYIF FT LRGIEESHEGHDSNSNGVFYSKPSEVLLEELEQLVNGETVDA" FT misc_feature 761170..763314 FT /gene="recB" FT /locus_tag="VSAL_I0681" FT /note="HMMPfam hit to PF00580, UvrD/REP helicase, score FT 3.9e-98" FT /inference="protein motif:HMMPfam:PF00580" FT misc_feature 761230..761253 FT /gene="recB" FT /locus_tag="VSAL_I0681" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 764777..766801 FT /transl_table=11 FT /gene="recD" FT /locus_tag="VSAL_I0682" FT /old_locus_tag="TVS0526" FT /product="exodeoxyribonuclease V alpha chain" FT /EC_number="3.1.11.5" FT /note="CDS contains additional 60 internal amino acid FT residues in comparison to the E.coli orthologue" FT /db_xref="GOA:B6EGF1" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR006344" FT /db_xref="InterPro:IPR007807" FT /db_xref="UniProtKB/TrEMBL:B6EGF1" FT /protein_id="CAQ78367.1" FT /translation="MLKQLQHLMAHGVLRPLDLQFAKFLGQQEKNSDKNLIMLLAAMTS FT HELGKGHVCIDIEQVEQGDLFTLPAKYRDALLALVPEKNQWISELSAASTISNGTEATP FT LAFDGTRLYLQRYWSFEQRVANRITKAAQSVAVNAQLSNTLDELFARQYHFLFSGLKKL FT ENNNQVSRQQLVCDMLDVVGSSSSELDWQAIDGVLLSATKSSELEPLDNLIPTKHCVNW FT QKVAAAVALTRRFSVISGGPGTGKTTTVTKLLASLVTQAQQDNKSIAIKLVAPTGKAAA FT RLTESIGQAVQSIGLAPEVKEAIPTDASTLHRLLGYIPNQVDFRHNKSNPLHLDVLVVD FT EASMVDLPMMARLLDAVPEHARVILLGDKDQLASVEAGAVLGDICQFTKMGYSQNQAQQ FT LSQLTGYALPVQSHNNAVADSLCMLQKSYRFDARSGIGQLAKAINEGCKFKVEAVWAKG FT FSDIRFHDLSNDSYNAMITMMVNGYRSYLGHIHAGDKPEVALKAFSQIQLLCAMREGDF FT GVVGLNQRIEKGLRKSDLIPHGDEVWYSGRPVMVTQNDYGVGLYNGDIGIAMPDPVDQR FT LRVYFDMPDGSIRGVLPSQLPEHETVYAMTIHKSQGSEFEHTVLALPAEFSPILTRELI FT YTGVTRAKKKLDLFATEKVVARGVMIKTQRNSGLAALMS" FT misc_feature 765494..765517 FT /gene="recD" FT /locus_tag="VSAL_I0682" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(767012..768346) FT /transl_table=11 FT /gene="dcuB" FT /locus_tag="VSAL_I0683" FT /old_locus_tag="TVS0527" FT /product="anaerobic c4-dicarboxylate transporter DcuB" FT /db_xref="GOA:B6EGF2" FT /db_xref="InterPro:IPR004668" FT /db_xref="UniProtKB/TrEMBL:B6EGF2" FT /protein_id="CAQ78368.1" FT /translation="MNIDFWLQLAVVLGCIGIGGRFGGVGLGAAGGLGVCLLVLGFGLQ FT PASPPVTVLLIIIAVIACTSVLQGAGGLDFLVRIAEKLLRKKPSAITFLGPLISSMFVI FT FCGTSYVAFAVYPVIAEVAAEAKIRPERPMSMAVIASGIAITASPMSAATAGMIASLSL FT YDVSFFQILAVSMPAFLIGALCGCAFVYKRGLELEQDPEFQRRVASGEYQLIHEDVNSP FT EEEYKPSTGVKASVLVFGLGVATVILFGTFKSLLPSWDIDGKTVVLSTPMLIQMVMLAS FT ALFIIVFAKVPSDKFASGSVFRSGLIGVVGVFGISWMTGTFFNAYQPFFETTFEGMVET FT APMMFGLILFCFSAVIFSPSATVSALMPLGAAMGIPPGLLVALYPATCGDFIVPGTGQI FT GCLSFDRTGTTRLGTYVINHSYILPGFVMVISSVTAGYFISKIVF" FT misc_feature complement(order(767030..767098,767189..767257, FT 767276..767335,767378..767446,767483..767551, FT 767579..767647,767777..767845,767873..767941, FT 768002..768070,768128..768196,768215..768283)) FT /gene="dcuB" FT /locus_tag="VSAL_I0683" FT misc_feature complement(767216..768325) FT /gene="dcuB" FT /locus_tag="VSAL_I0683" FT /note="HMMPfam hit to PF03605, Anaerobic c4-dicarboxylate FT membrane transpo, score 2.8e-131" FT /inference="protein motif:HMMPfam:PF03605" FT misc_feature complement(767732..767809) FT /gene="dcuB" FT /locus_tag="VSAL_I0683" FT /note="PS00217 Sugar transport proteins signature 2." FT /inference="protein motif:ProSite:PS00217" FT CDS complement(768445..769827) FT /transl_table=11 FT /gene="argH" FT /locus_tag="VSAL_I0684" FT /old_locus_tag="TVS0528" FT /product="argininosuccinate lyase" FT /EC_number="4.3.2.1" FT /db_xref="GOA:B6EGF3" FT /db_xref="InterPro:IPR000362" FT /db_xref="InterPro:IPR003031" FT /db_xref="InterPro:IPR008948" FT /db_xref="InterPro:IPR009049" FT /db_xref="InterPro:IPR020557" FT /db_xref="InterPro:IPR022761" FT /db_xref="UniProtKB/TrEMBL:B6EGF3" FT /protein_id="CAQ78369.1" FT /translation="MSSKLWGGRFDLPTNKLVEEFNATILIEKRLFPVDIKGSIAHATM FT LEKQKIITQIEAEQIISGLQAVAKEIEEGSFVYDTADEDVHMSIEKRMTEIIGSVGGKL FT HTARSRNDQTTLDSKIHMRATIKENLALIRQMQEIIIQRAKGEINVIMPGYTHLQTGQP FT ILFSHWIMAYFWMLERDYSRFQDLYRRMGQCPLGAAALAGTTFPIDRFYTAELLGFDEP FT TPNSIDSVSDRDHMVEFNSTAAICFMHLSRLSEEIVLFSSQDFKFIELSDDFCTGSSIM FT PQKKNPDIAEKIRGKTGRMYGNLMAILTTMKGLPLAYNTDMSEDKEAVYDSMDTLQLSL FT QVMTPMIEKMIIIEANTRNAADRGFSTATDMADYLVRKGLPFREAHHIVGSTVNYCIKH FT DKKLDDLTIDEFRSFSNLIEDDIYQNITLEACVSARGSYGGTAPQAVEAQIQHAESIVT FT AG" FT misc_feature complement(768922..769806) FT /gene="argH" FT /locus_tag="VSAL_I0684" FT /note="HMMPfam hit to PF00206, Lyase, score 2e-80" FT /inference="protein motif:HMMPfam:PF00206" FT misc_feature complement(768937..768960) FT /gene="argH" FT /locus_tag="VSAL_I0684" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(768970..768999) FT /gene="argH" FT /locus_tag="VSAL_I0684" FT /note="PS00163 Fumarate lyases signature." FT /inference="protein motif:ProSite:PS00163" FT CDS complement(770708..772057) FT /transl_table=11 FT /gene="argA" FT /locus_tag="VSAL_I0685" FT /old_locus_tag="TVS0529" FT /product="amino-acid acetyltransferase" FT /EC_number="2.3.1.1" FT /db_xref="GOA:B6EGF4" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR010167" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6EGF4" FT /protein_id="CAQ78370.1" FT /translation="MNRVKFRSTALVKGFRQSAPYVNAHRDKTVVIMLGGEAIADQNFA FT NIVNDIALLNSLGLRIVIVYGTRPQMRSQLKENGHHAPFHKGIRVTDEQTLELVKQIAG FT QLQLDITARLSMSLNNTPMAGAQINVISGNFIIAQPLGVDDGIDYCHSGRVRRIDTNGI FT SRMLDQQSIVLLGPVASSVTGECFNLLSEDVATQLAIRLNADKLIGFCSEQGVVDNQGH FT ILAELFPNEAETILGKLETDLNPKDGNSTGTMRFLRGAISACKAGVPRSHLISYKEDGA FT LIQELFSFDGIGTQVVMASSEQIRDAEIDDIGGIMDLIHPLEEEGILVRRSREQLEQEV FT AQFTIIEKDGLVIACAALYPFPEDGMAEMGCVAVHPDYRDGDRGVTLLNRLRFKAKQFK FT LLQLFVLTTRSLHWFREQGFVEVDVSQLPMTKQKLYNYQRKSKILVLKIQ" FT misc_feature complement(770798..771028) FT /gene="argA" FT /locus_tag="VSAL_I0685" FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 1.5e-07" FT /inference="protein motif:HMMPfam:PF00583" FT misc_feature complement(771233..771976) FT /gene="argA" FT /locus_tag="VSAL_I0685" FT /note="HMMPfam hit to PF00696, Amino acid kinase FT family,score 2.3e-16" FT /inference="protein motif:HMMPfam:PF00696" FT CDS 772199..772585 FT /transl_table=11 FT /locus_tag="VSAL_I0686" FT /old_locus_tag="TVS0530" FT /product="putative exported protein" FT /note="Possible alternative translational start site after FT codon 1" FT /db_xref="InterPro:IPR021271" FT /db_xref="UniProtKB/TrEMBL:B6EGF5" FT /protein_id="CAQ78371.1" FT /translation="MMSQTQQKELKKRKIRLLVLMSFFAVGLVSAVIAAMFRVGFFAQM FT PVSQLYGNWIELGVPTYARDSFTVNSSGVYTHGRLINTKFDFDGKTLTYMHGETEYVYL FT VEDNDGAELLRMKPTHYKSSFRKQ" FT sig_peptide 772199..772300 FT /locus_tag="VSAL_I0686" FT misc_feature 772247..772315 FT /locus_tag="VSAL_I0686" FT CDS 772764..773864 FT /transl_table=11 FT /gene="mltA" FT /locus_tag="VSAL_I0687" FT /old_locus_tag="TVS0531" FT /product="membrane-bound lytic murein transglycosylase A FT precursor" FT /EC_number="3.2.1.-" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EGF6" FT /db_xref="InterPro:IPR005300" FT /db_xref="InterPro:IPR010611" FT /db_xref="InterPro:IPR014733" FT /db_xref="UniProtKB/TrEMBL:B6EGF6" FT /protein_id="CAQ78372.1" FT /translation="MLRKLPFVCILLALAGCADQPTDRAQQYLDGSFSSNLNEVSDIDS FT DKPSDFSAFKNQSKEVVERSESMSLRYEELYTKLQQWIDESSNPAKLSNYGIQFAQMGG FT GDKQGNVMFTGYFSPVIEMRHKPTDKFKYPVYDKPACGSNCPTRAEINAGALSGLGLEL FT GYSDNMIDPFIMEVQGSGFIHFGDDDKLEYFAYGGKNNHPYVSIGKVLIERGEVERKDM FT SLKAIKEWVERNDDATVRELLETNPSYVFFSPRDANHVLGTAGIPLIAGAAVAADRTLL FT PMGTPILAEVPQLDKDGKWTGKHVLKVLLALDTGGAVKENHLDQYYGMGPEAGIAAGHF FT KHFGRVWKLGLKDSETENPWEMPKKK" FT sig_peptide 772764..772817 FT /gene="mltA" FT /locus_tag="VSAL_I0687" FT misc_feature 772782..772814 FT /gene="mltA" FT /locus_tag="VSAL_I0687" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 773022..773567 FT /gene="mltA" FT /locus_tag="VSAL_I0687" FT /note="HMMPfam hit to PF03562, MltA N-terminal domain,score FT 1.3e-86" FT /inference="protein motif:HMMPfam:PF03562" FT misc_feature 773577..773813 FT /gene="mltA" FT /locus_tag="VSAL_I0687" FT /note="HMMPfam hit to PF06725, 3D domain, score 9.3e-22" FT /inference="protein motif:HMMPfam:PF06725" FT CDS 773959..774774 FT /transl_table=11 FT /locus_tag="VSAL_I0688" FT /old_locus_tag="TVS0532" FT /product="putative membrane protein" FT /db_xref="GOA:B6EGF7" FT /db_xref="InterPro:IPR000594" FT /db_xref="InterPro:IPR009036" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EGF7" FT /protein_id="CAQ78373.1" FT /translation="MRELTTPASESYDQRFGGTRRLYGNSEVEIMRAAHVCVVGIGGVG FT SWAVEALVRTGLGEITLIDMDDVCVTNINRQIHAMTGTIGQSKIEVMAERIKLINPECK FT INLIDDFITPENQAEYISKEFDYVLDAIDSMKPKAALLAYCKSNKIKVITTGGAGGQTD FT PTQIAITDLSKTIQDPLAKKLRDTLRHHHNFTKNTKRKFGIDCVYSTEHLKYPQADGSV FT CATKATAEGPKRMDCATGFGAATVVTATFGFVAVSRIVEKLIEKHSTRD" FT misc_feature 774052..774459 FT /locus_tag="VSAL_I0688" FT /note="HMMPfam hit to PF00899, ThiF family, score 2.3e-57" FT /inference="protein motif:HMMPfam:PF00899" FT misc_feature 774670..774738 FT /locus_tag="VSAL_I0688" FT CDS complement(774899..775336) FT /transl_table=11 FT /locus_tag="VSAL_I0689" FT /old_locus_tag="TVS0533" FT /product="conserved hypothetical protein, SufE-related FT protein" FT /note="Similar to Escherichia coli ygdk SufE-like protein FT YgdK. Members of the YgdK/SufE protein family are enhancers FT of cysteine desulfurases" FT /db_xref="InterPro:IPR003808" FT /db_xref="InterPro:IPR017763" FT /db_xref="UniProtKB/TrEMBL:B6EGF8" FT /protein_id="CAQ78374.1" FT /translation="MSTFPSSPFGFDVTHTTVLDFMSEAKGWEDRYRNVIQLGKKLPKM FT PEKLQQETVTISGCESKVWLQHEVVDGVYFFCADSDARIVRGLIALVMAAVNNKTAEEI FT SAFDMDGYFAQLGLIEHLSPSRGNGLKAIIETINKAIRSDR" FT misc_feature complement(774911..775285) FT /locus_tag="VSAL_I0689" FT /note="HMMPfam hit to PF02657, Fe-S metabolism associated FT domain, score 3.9e-40" FT /inference="protein motif:HMMPfam:PF02657" FT CDS complement(775361..776578) FT /transl_table=11 FT /gene="sufS" FT /locus_tag="VSAL_I0690" FT /old_locus_tag="TVS0534" FT /product="cysteine desulfurase" FT /EC_number="2.8.1.7" FT /db_xref="GOA:B6EGF9" FT /db_xref="InterPro:IPR000192" FT /db_xref="InterPro:IPR010970" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR022471" FT /db_xref="UniProtKB/TrEMBL:B6EGF9" FT /protein_id="CAQ78375.1" FT /translation="MTAFTIDAVRSQFPALSQKINGQPIAYFDSAATTQKPKVVLNAIQ FT DYYQNDNANVHRGSHSLTASATLKFEQARATVQQFINAKNAKEIIWTRGATEAINLIAQ FT TYARSTLQPGNEILISELEHHANIVPWQIVAEQTGAKIIKIPMKQDCTLDMLAFESLVT FT QNTKIIAIAQVTNVTGTLNPIDTIIKAAHNVGAIVVIDGAQGIVHHDIDVQAMDADFYV FT FSGHKLFAPAGIGALYGKQHLLESMPVWHGGGKMVEKVSFEKTTFAELPGKFEAGTPNV FT AGAIAFATAIKWIKQFAHDDLNTHINELRHMAIDGIKDIEDLRFIGLQDNASLFSFVID FT GVHHQDIATLLDQQGIAVRSGNHCAHPMLDALGLTGTVRVSFALYNTKQDVQRFIDALN FT KAADML" FT misc_feature complement(775385..776473) FT /gene="sufS" FT /locus_tag="VSAL_I0690" FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II, score 4.9e-05" FT /inference="protein motif:HMMPfam:PF00155" FT misc_feature complement(775397..776503) FT /gene="sufS" FT /locus_tag="VSAL_I0690" FT /note="HMMPfam hit to PF00266, Aminotransferase FT class-V,score 2.6e-194" FT /inference="protein motif:HMMPfam:PF00266" FT CDS 776939..777847 FT /transl_table=11 FT /gene="gcvA" FT /locus_tag="VSAL_I0691" FT /old_locus_tag="TVS0535" FT /product="glycine cleavage system transcriptional FT activator" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EGG0" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EGG0" FT /protein_id="CAQ78376.1" FT /translation="MSRRLPPLNSLRVFEAAARHLSFTRAAEELFVTQAAVSHQIKALE FT EFLGLKLFRRRNRSLLLTEEGQGYFLDIKEIFSSLSEATDKVLERSAKGALTISLPPSF FT AIQWLVPRLSDFNQKEPDIDVRIKAVDMDEGSLTEDVDVAIYYGRGNWPGLRVELLYQE FT QLLPLCSPQVLLNEKPLATIDDLRFHTLLHDTSRKDWKLFVKQFELQGMNVNQGPIFSH FT STMVLQAAAHGQGIALGNNVLAQPELDAGRLVAPFEELLISKNAFYLVCNEKQADTGRI FT ATFREWVLSKARSEQDVVDDE" FT misc_feature 776960..777139 FT /gene="gcvA" FT /locus_tag="VSAL_I0691" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 1.4e-21" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature 776999..777064 FT /gene="gcvA" FT /locus_tag="VSAL_I0691" FT /note="Predicted helix-turn-helix motif with score FT 1791.000, SD 5.29 at aa 21-42, sequence FT LSFTRAAEELFVTQAAVSHQIK" FT misc_feature 777002..777094 FT /gene="gcvA" FT /locus_tag="VSAL_I0691" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature 777203..777817 FT /gene="gcvA" FT /locus_tag="VSAL_I0691" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 4.3e-42" FT /inference="protein motif:HMMPfam:PF03466" FT CDS 777840..778226 FT /transl_table=11 FT /locus_tag="VSAL_I0692" FT /old_locus_tag="TVS0536" FT /product="membrane protein" FT /db_xref="InterPro:IPR006696" FT /db_xref="UniProtKB/TrEMBL:B6EGG1" FT /protein_id="CAQ78377.1" FT /translation="MNSRLCFLIAGLSGALTVGLGAFGSHGLKDVLSPYLLDVYQTAVQ FT YQMWHTLALFGCGILLRNSMSKGVSYAALLFTIGIIFFSGSLYALVFTGIKWFGPITPL FT GGLCFISGWLTLAVSTYRLTEVSK" FT sig_peptide 777840..777920 FT /locus_tag="VSAL_I0692" FT misc_feature order(777852..777920,777963..778031,778050..778118, FT 778128..778196) FT /locus_tag="VSAL_I0692" FT misc_feature 777891..778193 FT /locus_tag="VSAL_I0692" FT /note="HMMPfam hit to PF04241, Protein of unknown function FT (DUF423), score 6.6e-45" FT /inference="protein motif:HMMPfam:PF04241" FT CDS 778223..779314 FT /transl_table=11 FT /gene="mtfA" FT /locus_tag="VSAL_I0693" FT /old_locus_tag="TVS0537" FT /product="putative RNA 2'-O-ribose methyltransferase mtfA" FT /EC_number="2.1.1.-" FT /db_xref="GOA:B6EGG2" FT /db_xref="InterPro:IPR002877" FT /db_xref="InterPro:IPR011224" FT /db_xref="UniProtKB/Swiss-Prot:B6EGG2" FT /protein_id="CAQ78378.1" FT /translation="MKQVMFYCRSGFEKECAGEIQDKATQLEVFGFPRLKSNTGYVLFE FT CYQEGDADKLIQQIKFNELIFARQMFAVATELSDLPTEDRISPILNALSSVEGVPHCGD FT IRIETPDTNEAKELLKFCRKFTVPLRQALRGKQMLTARDTDRIPVMHVCFIEPGHCYVG FT YSYTNNNSKFFMGIPRLKFPSDSPSRSTLKLEEAFHVFIPRDEWDTRLASGMWAVDLGA FT CPGGWTYQLVKRSMFVHAIDNGMMAQSLMDTGQVKHHMVDGFKFEPQRKNVTWIVCDMI FT EKPARVAHLMGEWLIKGWAKEALFNLKLPMKGRYDEVLQDIENLKEFLNKNGFKYKLQA FT KHLYHDREEITVHIQAITNISPH" FT CDS complement(779521..780294) FT /transl_table=11 FT /gene="exo" FT /locus_tag="VSAL_I0694" FT /old_locus_tag="TVS0538" FT /product="5'-3' exonuclease" FT /db_xref="GOA:B6EGG3" FT /db_xref="InterPro:IPR008918" FT /db_xref="InterPro:IPR020045" FT /db_xref="InterPro:IPR020046" FT /db_xref="InterPro:IPR022895" FT /db_xref="UniProtKB/Swiss-Prot:B6EGG3" FT /protein_id="CAQ78379.1" FT /translation="MAIHLVIIDALNLIRRVHSAQPNQDDIQAVVTTTGRTINRILKET FT EPTHIIAVFDHHLQDRGWRAEVLPKYKEDRKPMPEALQKGMDAIQESWWKLGIDSLLSD FT GDEADDLVATLANKVASRNEQVTIVSTDKGYCQLLSPTLRIRDYFQHRWLDEPFIEKEF FT GLKPEQLADYWGLAGISSSKITGIPGIGPKAALEILTQFPTIEAANESDELPKKYRKKF FT DEYYNTAILCRKVAGLRTDIELGFNLQDIRYEKPE" FT misc_feature complement(779524..779802) FT /gene="exo" FT /locus_tag="VSAL_I0694" FT /note="HMMPfam hit to PF01367, 5'-3' exonuclease,C-terminal FT SAM fold, score 3.4e-10" FT /inference="protein motif:HMMPfam:PF01367" FT misc_feature complement(779821..780288) FT /gene="exo" FT /locus_tag="VSAL_I0694" FT /note="HMMPfam hit to PF02739, 5'-3' exonuclease,N-terminal FT resolvase-, score 1.5e-13" FT /inference="protein motif:HMMPfam:PF02739" FT CDS complement(780377..781735) FT /transl_table=11 FT /locus_tag="VSAL_I0695" FT /old_locus_tag="TVS0539" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR005269" FT /db_xref="InterPro:IPR021826" FT /db_xref="UniProtKB/TrEMBL:B6EGG4" FT /protein_id="CAQ78380.1" FT /translation="MITHISPAGSMDLLSQLEIDQLKKTASSDVYRMYRNCTLAVLNSG FT SHTDSSKELLDKYKSFDVSVTRRDRGIKLELSNPPEHAFVDGNIIKGIQEHLFSVLRDM FT VYVNMQIADHNRLNLTKATHLTNLVFSILRNAKALHTGIEPNLVVCWGGHSINPIEYQY FT TREVGHELGLRELNICTGCGPGAMEGPMKGAAIGHAKQRYSQSRFVGLTEPSIIAAEPP FT NPIVNELIIMPDIEKRLEAFVRMAHGIVIFPGGPGTAEELLYILGIMMNPANRQQPMPI FT VLTGPKESEAYFLSIDTFIRETLGEEATQYYSIVVGDPEKAAVIINHGIKKVKEYRKAT FT DDSYSFNWALKIEPEFQLPFEPNHEAMASLDLHLNQPTESLAANLRQAFSGIVTGNVKA FT EGIAEIEKHGVFKLHGEPELMKKMDRLLQDFVEQGRMKLPGSKYVPCYEIVVD" FT misc_feature complement(780749..781177) FT /locus_tag="VSAL_I0695" FT /note="HMMPfam hit to PF03641, Possible lysine FT decarboxylase, score 3.5e-50" FT /inference="protein motif:HMMPfam:PF03641" FT CDS complement(781864..783426) FT /transl_table=11 FT /locus_tag="VSAL_I0696" FT /old_locus_tag="TVS0540" FT /product="conserved hypothetical protein" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EGG5" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001054" FT /db_xref="UniProtKB/TrEMBL:B6EGG5" FT /protein_id="CAQ78381.1" FT /translation="MIEVSIVASELSQLKQQLDQTRLSHRDTSLKSRREILLLKRIILR FT FCAACKHHDSDLDKEIIELAHDIEHIENTSDLTVRIATFERLINRYQLNVQKEHSVMEE FT HISYCGETLQRVVGLPTGLKRDLRNLLRHPSQDGTKHIQRIVRLIELYERAIKFISAGS FT VSSEINANEIIDVDTQEQLSNELQHLISELDFNNTSGEDLLDIRNKLLTGVDAVSLIDL FT ALQTLQLVLQGTNKERKASQVFVGEMNTQVAQIIKTSEQNQEQGQSYLDQRSLLNEEYG FT LLIKQAENILESKISAQEHKTKMSLLLNEMSDLAERNKAMQEREAALIERHEYTTKKLN FT SVYQETLEYRRQLNDQQQRVFKDPLTNVYNRAAMHERLDLEYKRWVRHQHSLVLSMIDI FT DQFKRINEQFGHLAGDKALKIIAKTIEKQVSNTDFVARFSGKEFLILFTETTKEERETV FT LKAIQAAIAKLPFKFKGNHVQVTVSICSSEFTNSDIPEKVIERSVQALYKQKTKGTQQR FT ICA" FT misc_feature complement(781879..782361) FT /locus_tag="VSAL_I0696" FT /note="HMMPfam hit to PF00990, GGDEF domain, score 9.2e-42" FT /inference="protein motif:HMMPfam:PF00990" FT CDS complement(783603..785834) FT /transl_table=11 FT /locus_tag="VSAL_I0697" FT /old_locus_tag="TVS0541" FT /product="putative exported protein" FT /db_xref="GOA:B6EGG6" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:B6EGG6" FT /protein_id="CAQ78382.1" FT /translation="MIYMPLRQCFLVILILFPLSAWAKFFSAPILNDAYQLLETNPEQS FT LSIANQYLEQRQISPSQDPNRIQINNDSERTIRTPISTVEAFQIKALANKRLSRNRESI FT ESIKQAISLADDFSLKSSYLESKLIYASLWWDLTKDIDETNTILDEIQQSLSQLNTKTD FT IHQKIYFRLALIHAQVESEQGNNNKAQRYFSEAMSYGNSLNDPSSMIYYHISYGRHFLK FT NKQFDQALTELLSAYWQSIEADNSGQLASTNYLLGQLFFQRKVLDKALEHASQSAEFYG FT RYNKSEQLSNVLVLIAKIHLEQGRFNLALVQYFNALDQEKEKNNVNKLISLRLDIANTY FT FLLYNYALSEHYLKQANNLNEYVDLPKEQAFANLLQAKLNLVHNKPKLAVSDIQKAIKY FT SNQDNNISLKLQSQKLLSETYEKMGLFKKALVAQREYETLNSSLQAAQNQINEEVFRQQ FT KSIIEQSLHYQGLEEQLKENHIQTLKIQKIAGFLVVLLTVLAIYSFRKQQVNRFLKKRL FT HLLLNKYYTHPRSGLRNLRLLTERLPSSLQQSSSNLEQWHLGELINEPLSDRLRFTLFN FT VPMLQDLYMTQGYQEGLAIEKEFGDHLSAVVRSPSRIYHFSDASFLYIEHKSDTTSCAQ FT EMAETVQQWINNFTSDVMTDKTVNIGMVEYPFLPRAYTAINDRELIDILLMATNTARDI FT HAQESGSQWVHYRAIDNAPAASFATNNIRSACEQAINQGLIKVYSSRNT" FT misc_feature complement(784866..784967) FT /locus_tag="VSAL_I0697" FT /note="HMMPfam hit to PF00515, Tetratricopeptide FT repeat,score 0.17" FT /inference="protein motif:HMMPfam:PF00515" FT misc_feature complement(785484..785585) FT /locus_tag="VSAL_I0697" FT /note="HMMPfam hit to PF00515, Tetratricopeptide FT repeat,score 0.18" FT /inference="protein motif:HMMPfam:PF00515" FT misc_feature complement(785742..785810) FT /locus_tag="VSAL_I0697" FT sig_peptide complement(785766..785834) FT /locus_tag="VSAL_I0697" FT CDS complement(785945..786790) FT /transl_table=11 FT /gene="queF" FT /locus_tag="VSAL_I0698" FT /old_locus_tag="TVS0542" FT /product="7-cyano-7-deazaguanine reductase" FT /EC_number="1.7.1.-" FT /db_xref="GOA:B6EGG7" FT /db_xref="InterPro:IPR016428" FT /db_xref="InterPro:IPR020602" FT /db_xref="UniProtKB/Swiss-Prot:B6EGG7" FT /protein_id="CAQ78383.1" FT /translation="MTKYTNADELKSLTLGQKTEYKHSYEPELLQAVPRSLNRDDLALG FT DELPFVGCDVWTLYELSWLNQNGLPQVAIGDVVLPATSPNLVESKSFKLYLNSFNQTKF FT SSWEDVTSTLIKDLSVCAGEEVMVNIHPVQAYSQQPIVDMQGECIDNQDIVIDSYEFDA FT NYLESSTSEKMVNEVLHSHLLKSNCLITNQPDWGSVEINYEGNKIDHEKLLRYLISFRQ FT HNEFHEQCVERIYTDIMKFCSPKSLTVFARYTRRGGLDINPFRSSHLIKPEHNLRLARQ FT " FT misc_feature complement(785975..786262) FT /gene="queF" FT /locus_tag="VSAL_I0698" FT /note="HMMPfam hit to PF01227, GTP cyclohydrolase I, score FT 4e-06" FT /inference="protein motif:HMMPfam:PF01227" FT CDS 786899..787447 FT /transl_table=11 FT /gene="syd" FT /locus_tag="VSAL_I0699" FT /old_locus_tag="TVS0543" FT /product="protein Syd" FT /function="In the E.coli orthologue; functioning either as FT a chelating agent for excess secY in the cell or as a FT regulatory factor that negatively controls the translocase FT function" FT /db_xref="GOA:B6EGG8" FT /db_xref="InterPro:IPR009948" FT /db_xref="UniProtKB/Swiss-Prot:B6EGG8" FT /protein_id="CAQ78384.1" FT /translation="MPLSVEQALANFSQRYVEAWKEKHDSLPINEELVGLASPCIDETR FT NLEVLWQPVARDESIRLVNIENGIELDLHDDFHAFYGAQFSADMTAKFEGMNVELLQIW FT SDEDLENLQGNMLGHLVMQRRLKLVPTLFIAVTDDEMEVISICNQSGEVILDTVGTKKR FT KVLAESMAEFLEKLEPVVA" FT misc_feature 786920..787441 FT /gene="syd" FT /locus_tag="VSAL_I0699" FT /note="HMMPfam hit to PF07348, Syd protein, score 1.5e-97" FT /inference="protein motif:HMMPfam:PF07348" FT CDS 787551..788324 FT /transl_table=11 FT /locus_tag="VSAL_I0700" FT /old_locus_tag="TVS0544" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR016908" FT /db_xref="UniProtKB/TrEMBL:B6EGG9" FT /protein_id="CAQ78385.1" FT /translation="MFVTELDFEVYCDTSMAAVEKAINYCLDCLRYNGQVIGRELPVLM FT KGTNFVARVVCPEEDSLHPDNHSPQVNLALKQLSDFGLLQPKIRVVGQDMNSDPSDESE FT KVSWQILYTTHLHTCSPIRHGETFQPIPLYRLPAVANGDQKQFIKWQEDWSACDQLQMN FT GSVVEHPALHEVSSSESRLFKRGWDLCRRMEVLSGISTYLYIYRVGGESKEKELARKCP FT VCDGDWALEEPIHDVFDFKCDECRLVSNLSWDFKE" FT CDS complement(788386..788841) FT /transl_table=11 FT /locus_tag="VSAL_I0701" FT /old_locus_tag="TVS0545" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR003791" FT /db_xref="UniProtKB/Swiss-Prot:B6EGH0" FT /protein_id="CAQ78386.1" FT /translation="MQIWVDADACPKVVKEVLCRAATRTGLQITFVANHYVPVPTAPNI FT KSIQVESGFDVADDEIVRRSEAGDLVISGDIPLAAELIEKKVQVLNPRGELYTEATIKA FT RLNIRDFMDTMRASGIQTGGPAALSQTDRREFANQLDRILAKVKKTI" FT misc_feature complement(788404..788841) FT /locus_tag="VSAL_I0701" FT /note="HMMPfam hit to PF02639, Uncharacterized FT BCR,YaiI/YqxD family COG167, score 2e-64" FT /inference="protein motif:HMMPfam:PF02639" FT CDS complement(788841..789110) FT /transl_table=11 FT /locus_tag="VSAL_I0702" FT /old_locus_tag="TVS0546" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR019466" FT /db_xref="UniProtKB/TrEMBL:B6EGW0" FT /protein_id="CAQ78387.1" FT /translation="MKNVTDELQTIMQDLINEGKKPTTALVKSRLSTQVPIPAIITAIK FT SFKSSAQVPKIEVRETSLTADERIAQLEQQIKELTQRLNALENK" FT misc_RNA 789582..789818 FT /gene="csrB1" FT /locus_tag="VSAL_I3142s" FT /old_locus_tag="VSsRNA55" FT /product="CsrA-regulating small RNA CsrB1" FT /note="similar to Vibrio fischeri CsrB1 (gb|CP000020.1|) FT 88% identity; E()=6e-75; 237 nt overlap" FT /inference="similar to sequence:INSDC:CP000020" FT CDS 790040..791326 FT /transl_table=11 FT /locus_tag="VSAL_I0703" FT /old_locus_tag="TVS0547" FT /product="PTS system, cellobiose permease IIC component" FT /note="Possible alternative translational start site after FT codon 7" FT /db_xref="GOA:B6EGW1" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR004501" FT /db_xref="InterPro:IPR004796" FT /db_xref="UniProtKB/TrEMBL:B6EGW1" FT /protein_id="CAQ78388.1" FT /translation="MSTQAATMQSTIMEKVNKILPKLLKVVNSKPIVAIKEGFMLTMPL FT TIIGSVFLLLAFVPIDGYDQFMAGIFGAEWSTPLFQVVGATFDILALIGAFGIAYTYVK FT YEGHNGVNAGVLAIVSLLIVMNAFVVAPDGVRHIGGVIPKAFLGGKGMIAAIVIGLVVG FT MIYSMAFNRNWVIKLPDSVPEGVSNAFKSLIPGFLIITLAFLTYIFFEVVFERTFIETI FT YHIIQTPLQSMSDSFFGAVGIALLISLLWWCGVHGPVIVMGIMGPIVTANALHNQSIVN FT AGEVLIAGENGKIVTNQFVDQFITVGGSGLTFGLVCCMVLFARSVQFKQLGRLSFIPGI FT FNINEPVIFATPIIFNPIMFIPFVTAPVLSAIMVYTSINMGFVGPFTAVQVPWTTPIVL FT SGFIVGGVECRCITSHRVLYDVMCVFPIL" FT misc_feature 790145..791140 FT /locus_tag="VSAL_I0703" FT /note="HMMPfam hit to PF02378, Phosphotransferase FT system,EIIC, score 4.9e-87" FT /inference="protein motif:HMMPfam:PF02378" FT misc_feature order(790151..790219,790277..790345,790364..790432, FT 790490..790549,790613..790681,790751..790819, FT 790955..791023,791081..791149) FT /locus_tag="VSAL_I0703" FT CDS 791444..791749 FT /transl_table=11 FT /gene="bglE" FT /locus_tag="VSAL_I0704" FT /old_locus_tag="TVS0548" FT /product="PTS system, cellobiose-specific component IIB" FT /EC_number="2.7.1.69" FT /db_xref="GOA:B6EGW2" FT /db_xref="InterPro:IPR003501" FT /db_xref="InterPro:IPR013012" FT /db_xref="UniProtKB/TrEMBL:B6EGW2" FT /protein_id="CAQ78389.1" FT /translation="MKKILLLCAAGMSTSMVVKKMGEAAVQQGLEIHIEAHGVETIQDY FT LAEYDLFLLGPQIRFKKDELQKLADEVNKKVEVIDMMDYGMMKGDKILKDALVLLS" FT sig_peptide 791444..791500 FT /gene="bglE" FT /locus_tag="VSAL_I0704" FT misc_feature 791450..791737 FT /gene="bglE" FT /locus_tag="VSAL_I0704" FT /note="HMMPfam hit to PF02302, PTS FT system,Lactose/Cellobiose specific IIB, score 8.1e-35" FT /inference="protein motif:HMMPfam:PF02302" FT misc_feature 791830..793236 FT /gene="pbgA" FT /locus_tag="VSAL_I0705" FT /note="HMMPfam hit to PF00232, Glycosyl hydrolase FT family,score 4.8e-199" FT /inference="protein motif:HMMPfam:PF00232" FT CDS 791836..793245 FT /transl_table=11 FT /gene="pbgA" FT /locus_tag="VSAL_I0705" FT /old_locus_tag="TVS0549" FT /product="6-phospho-beta-glucosidase" FT /EC_number="3.2.1.86" FT /db_xref="GOA:B6EGW3" FT /db_xref="InterPro:IPR001360" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR018120" FT /db_xref="UniProtKB/TrEMBL:B6EGW3" FT /protein_id="CAQ78390.1" FT /translation="MKFANDFLLGAATASYQIEGAWDQDGKGPTNWDEFTKIPGKTFEG FT TNGDIAIDHYNRYKEDIALMAEMGLESYRFSISWARIFPNGTGEINQKGIDFYNNVIDE FT CLKYGIVPFVTLYHWDLPLTLEKEGSWLNKATCDAYVEFAKLCFNEFGDRVKHFITFNE FT TVVFCALGYMAGAHPPGIQNDPKKYFQATHNVFYAHAKAVIEYKKLNQFGEIGLSHVFS FT PAFGVDDSEASHFAAIHANQFSMNWFYDPILLGKYPEYVVKQLQEEGNLPDWTDEELQT FT IFEAAPLNDFMGLNYYQPQRVEKIESGMEIRKITRENSTGSPGNPSYDNVYRTVKMDDK FT KYTKWDWEISPEGFVAGLEMIKEHYGQIKLYITENGLGDEDPIIDGEVCDIPRINFIKD FT HLGAVKEAVRRGVHIKGYYAWSAIDLLSWLNGYKKQYGFIYVDHQNGLERKKKASFHWF FT KDVIATRGENI" FT misc_feature 792943..792969 FT /gene="pbgA" FT /locus_tag="VSAL_I0705" FT /note="PS00572 Glycosyl hydrolases family 1 active site." FT /inference="protein motif:ProSite:PS00572" FT CDS 793275..794210 FT /transl_table=11 FT /locus_tag="VSAL_I0706" FT /old_locus_tag="TVS0550" FT /product="putative glucokinase" FT /EC_number="2.7.1.2" FT /db_xref="GOA:B6EGW4" FT /db_xref="InterPro:IPR000600" FT /db_xref="UniProtKB/TrEMBL:B6EGW4" FT /protein_id="CAQ78391.1" FT /translation="MATYLSFDIGGTDIKFGVLNEHGHILDQGKVQTESSGDQIIQTIV FT DIKEQWSTRYTFDGAAFSLPGFVDVNTGYLKTGGAIDDFYGFQFKEVMVAKLSLPVELE FT NDVNCVALAEKWLGKAQSVDNFICITIGTGIGGAIYINNQMVRGHGFMAGEFGYMFTKN FT IFDTKDKTTATMSFTASVREGLRRRYSKLKNINSIENLSGKDIFKLADSGDNIAINIID FT DFYKNIAIGLYNLTFILNPEKIIIGGAISNRDDLISNIENKFEEIIQTQPSINKFNVKE FT LVAIEKSTFNNDSGLIGSVYHFLSMTNQIK" FT misc_feature 793290..793805 FT /locus_tag="VSAL_I0706" FT /note="HMMPfam hit to PF00480, ROK family, score 1.3e-24" FT /inference="protein motif:HMMPfam:PF00480" FT CDS 794221..794544 FT /transl_table=11 FT /gene="bglI" FT /locus_tag="VSAL_I0707" FT /old_locus_tag="TVS0551" FT /product="phosphotransferase system (PTS) component IIA" FT /EC_number="2.7.1.69" FT /db_xref="GOA:B6EGW5" FT /db_xref="InterPro:IPR003188" FT /db_xref="UniProtKB/TrEMBL:B6EGW5" FT /protein_id="CAQ78392.1" FT /translation="MLVGEELESTVMELIINAGESKSCAMEALRAAKSGEWDKVDELLT FT QSAEASKRAHDVQTQLIGLDEGEGKVPVNLIMVHAQDHIMTSMLAKEMIQELIEIHRVL FT QNK" FT misc_feature 794242..794529 FT /gene="bglI" FT /locus_tag="VSAL_I0707" FT /note="HMMPfam hit to PF02255, PTS FT system,Lactose/Cellobiose specific IIA, score 1e-38" FT /inference="protein motif:HMMPfam:PF02255" FT CDS 794614..795624 FT /transl_table=11 FT /locus_tag="VSAL_I0708" FT /old_locus_tag="TVS0552" FT /product="HTH-type transcriptional regulator, LacI family" FT /db_xref="GOA:B6EGW6" FT /db_xref="InterPro:IPR000843" FT /db_xref="InterPro:IPR001761" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:B6EGW6" FT /protein_id="CAQ78393.1" FT /translation="MATINDVCKLAGVSKATVSRVMNGKGPVKEETKKLIFDAMETLNY FT KPSLVAQALATNSSNSIGLIVSFFDGYYFGILLKEATRIAEESGKQLIVTDGHNQLETE FT IEAINSLVARKCDAILIYSRTMTATDYCKIQETLPIPLVVINRTLPDGLGHAVAFDQYD FT ASRMAIEHLIELKHKNIAIITISLASSTGQIRLQGAKETLEKHGVHYDESLTIVKHGKL FT EDGYQACKELLSKSDKITAIFCFNDHLALGAIKALKEMNLRVPEDISIVGIDNDEISAF FT LSPALTTINVPIQEITQLAMNKALALISDKDIKPTTEVLTGELIIRDSSIYNKNK" FT misc_feature 794617..794694 FT /locus_tag="VSAL_I0708" FT /note="HMMPfam hit to PF00356, Bacterial regulatory FT proteins, lacI fami, score 3.4e-10" FT /inference="protein motif:HMMPfam:PF00356" FT misc_feature 794617..794682 FT /locus_tag="VSAL_I0708" FT /note="Predicted helix-turn-helix motif with score FT 1625.000, SD 4.72 at aa 2-23, sequence FT ATINDVCKLAGVSKATVSRVMN" FT misc_feature 794788..795597 FT /locus_tag="VSAL_I0708" FT /note="HMMPfam hit to PF00532, Periplasmic binding proteins FT and sugar b, score 3.3e-09" FT /inference="protein motif:HMMPfam:PF00532" FT CDS 795907..797184 FT /transl_table=11 FT /gene="lamB" FT /locus_tag="VSAL_I0709" FT /old_locus_tag="TVS0553" FT /product="maltoporin precursor (outer membrane protein S)" FT /db_xref="GOA:B6EGW7" FT /db_xref="InterPro:IPR003192" FT /db_xref="UniProtKB/TrEMBL:B6EGW7" FT /protein_id="CAQ78394.1" FT /translation="MKLLPVAFAVTAALSSPIILAETELLDNIQLDDQQPLVISPETDI FT PDGIVFSGYARYGFHFSDDTEKYVSADGQLIGNATGRLGYESNGGEFQFAKGFVSDNGT FT IWDVVLMLEHWGDEVGLKKFYAGATNVFESQPNAYIWAGRDFHNRPQTGLNDYFWMQND FT AQGAGIKNLEFGSVKFDMAAVAQVDDNGGTGDSGNYAITSKLHDINLTDALALSLYANY FT GFSSKNTETDKDTQTCTGTGLDKQCYVDDIDSYQLAIQLDHTYGAMTNKFVTRYGNNVD FT NNIFNKTEDLTTLLMQLEGKLVISNQTNIEYLAGYQSLEDKNASQDDRANYSAIVRPTY FT AWNSIHSTWLEAGYSVVDFDNQSGQNDAWKVTLSQNISFDMDSGARPMLRFYATVGDSN FT TEVDLTRGETGKQETFAVGAMWEAWW" FT sig_peptide 795907..795969 FT /gene="lamB" FT /locus_tag="VSAL_I0709" FT CDS complement(797251..797559) FT /transl_table=11 FT /locus_tag="VSAL_I0710" FT /old_locus_tag="TVS0554" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR021732" FT /db_xref="UniProtKB/TrEMBL:B6EGW8" FT /protein_id="CAQ78395.1" FT /translation="MENLFAILGLTFFCFLFWQQRRQSEFANQAIQHYCKKMELQLLSV FT ARGSYGFRLPSGKKRLYTTYEFEFSSIGDDHYTGKLIMVGFKAAKFNLPPYRIDGEF" FT CDS complement(797562..798602) FT /transl_table=11 FT /locus_tag="VSAL_I0711" FT /old_locus_tag="TVS0555" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR021936" FT /db_xref="UniProtKB/TrEMBL:B6EGW9" FT /protein_id="CAQ78396.1" FT /translation="MEQIYTLSQLIQQSNCEYAIYDLGRRVQRIDSKQFESIEAAQQPY FT LFPLQRHAHLAIAYWNETKQPWIWFLKLPLDERSLLQQADVGNFIKYVIEAIGVSLSSE FT LNEDQQQNLSNNPYTFKPKDNKMAMFHSLLRADLKQPMSQYYEQAKTYLSGNNGWTNWQ FT SVGVQGLADVCANLNKDNNSVALRNALTHLPNTVLYATLGCLEHIKLPEKLAQRQLEII FT NDLCDSDAADLFLLSAHIRALSGAPKKVLSEALAQILRSERLSHPEVLVAIAGRCWGGL FT EDIAIANQFLLRLAQTGDQQLFNQLFADLVMQPTLRMCMLQILHSDADSQLAQALVKLQ FT QNTKSE" FT CDS 798705..799025 FT /transl_table=11 FT /locus_tag="VSAL_I0712" FT /old_locus_tag="TVS0556" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007384" FT /db_xref="InterPro:IPR023376" FT /db_xref="UniProtKB/TrEMBL:B6EGX0" FT /protein_id="CAQ78397.1" FT /translation="MTTSLSLTVLLKQLTEQLQHHGHWQTATPSLSALASTEPFAIDTL FT SSTEWLQWIFIPKMFILIENGHPLPKGFSIAPYIEEALKNQKGTTEIIGICQNIDKLGK FT IL" FT misc_feature 798711..799016 FT /locus_tag="VSAL_I0712" FT /note="HMMPfam hit to PF04287, Domain of unknown FT function,DUF446, score 1.4e-39" FT /inference="protein motif:HMMPfam:PF04287" FT CDS 799022..799813 FT /transl_table=11 FT /gene="truC" FT /locus_tag="VSAL_I0713" FT /old_locus_tag="TVS0557" FT /product="tRNA pseudouridine synthase C" FT /EC_number="5.4.99.-" FT /note="CDS is extended at the N-terminus in comparison to FT orthologues" FT /db_xref="GOA:B6EGX1" FT /db_xref="InterPro:IPR006145" FT /db_xref="InterPro:IPR006224" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/TrEMBL:B6EGX1" FT /protein_id="CAQ78398.1" FT /translation="MNINKHNINTEALSENEEKPKPIELEIVYRDDDLIAINKPAGMLV FT HRSWLDKHETVFAMQTLRDQIGQHVFPLHRLDRPTSGILFFALSSAVAAQFSPLFASRE FT IKKTYHAIVRGWIEEGDILDYPLKEQLDKIADKKASKDVEAKEAITEYKPLANVELPYS FT TGKFPTSRYCLMELKPHTGRKHQLRRHMAHLRHPIVGDTTHGDSKHNRLFQNNLDSHRL FT LLHASELSFIHPSTNKHVVIKASVGEKWNKLMADFGWEIEL" FT misc_feature 799118..799600 FT /gene="truC" FT /locus_tag="VSAL_I0713" FT /note="HMMPfam hit to PF00849, RNA pseudouridylate FT synthase, score 1.6e-47" FT /inference="protein motif:HMMPfam:PF00849" FT misc_feature 799238..799282 FT /gene="truC" FT /locus_tag="VSAL_I0713" FT /note="PS01129 Rlu family of pseudouridine synthase FT signature." FT /inference="protein motif:ProSite:PS01129" FT CDS complement(799918..800772) FT /transl_table=11 FT /gene="suhB" FT /locus_tag="VSAL_I0714" FT /old_locus_tag="TVS0558" FT /product="inositol-1-monophosphatase" FT /EC_number="3.1.3.25" FT /db_xref="GOA:B6EGX2" FT /db_xref="InterPro:IPR000760" FT /db_xref="InterPro:IPR020583" FT /db_xref="InterPro:IPR022337" FT /db_xref="UniProtKB/TrEMBL:B6EGX2" FT /protein_id="CAQ78399.1" FT /translation="MYTRGRFLFFNIFWDITMHPMLNIAIRTARKAGDFVAKSFEQTDK FT IETTKKGNNEFITNIENDAQYMLVDMIKKSYPDHSIISEESGLIEGRDADVQWIIDPLD FT GTTNFVKGIPHFAISIAVRIKGRTEVACVYDPIRNELFTAQRGSGAQRNNQRMRVQELK FT DMNETILATGLPYRQKQHAESYTKILGAMFVECSDIRSSGCPSLDLCYLAAARIDGFFA FT LGLKPWEISAADLIARESGVICTDFTGNTDYMKTGNLVAGSPRMVKSMLKKIRDNGSEA FT LTK" FT misc_feature complement(799933..800724) FT /gene="suhB" FT /locus_tag="VSAL_I0714" FT /note="HMMPfam hit to PF00459, Inositol monophosphatase FT family, score 1.3e-75" FT /inference="protein motif:HMMPfam:PF00459" FT misc_feature complement(800440..800481) FT /gene="suhB" FT /locus_tag="VSAL_I0714" FT /note="PS00629 Inositol monophosphatase family signature FT 1." FT /inference="protein motif:ProSite:PS00629" FT CDS 800930..801658 FT /transl_table=11 FT /gene="yfhQ" FT /locus_tag="VSAL_I0715" FT /old_locus_tag="TVS0559" FT /product="hypothetical tRNA/rRNA methyltransferase" FT /EC_number="2.1.1.-" FT /note="Similar to Escherichia coli Hypothetical tRNA/rRNA FT methyltransferase YfhQ UniProt:P0AE01 (246 aa) fasta FT scores: E()=6e-57, 63.934% id in 244 aa" FT /db_xref="GOA:B6EGX3" FT /db_xref="InterPro:IPR001537" FT /db_xref="InterPro:IPR004384" FT /db_xref="UniProtKB/TrEMBL:B6EGX3" FT /inference="similar to sequence:UniProt:P0AE01" FT /protein_id="CAQ78400.1" FT /translation="MLDRIRIVLVGTSHSGNIGSAARAMKVMGLTNMVLVAPECEVDGQ FT AIALAAGASDIANRARIVSTLDEAISDCGLVIGSSARSRTLEWPMLEPREAGVKAIEEA FT PSHPIAFVFGRERVGLTNEELQKCHFHVCIPANPEYSSLNLAMAVQTISYEARVAWLDS FT QAYKGESKEAEYPLNNELELFYEHLEKVMMDTDFINKAHPGQVMNKMRRMFNRARPEIH FT ELRTLRGILTAVERSSNIKK" FT misc_feature 800939..801391 FT /gene="yfhQ" FT /locus_tag="VSAL_I0715" FT /note="HMMPfam hit to PF00588, SpoU rRNA Methylase FT family,score 1.2e-38" FT /inference="protein motif:HMMPfam:PF00588" FT CDS 801764..802270 FT /transl_table=11 FT /locus_tag="VSAL_I0716" FT /old_locus_tag="TVS0560" FT /product="HTH-type transcriptional regulator" FT /note="Expression may be stress-induced" FT /db_xref="GOA:B6EGX4" FT /db_xref="InterPro:IPR000944" FT /db_xref="InterPro:IPR010242" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:B6EGX4" FT /protein_id="CAQ78401.1" FT /translation="MKLTSKGRYAVTAMLDVALHAQEGPVPLADISERQGISLSYLEQL FT FSKLRKAGLVASVRGPGGGYRLGLKPDEIAVGMVISAVDESVDATKCHGKEGCQGGTRC FT LTHTLWRDLSSRISSFLDGISLGELMVDNEVQQVSDRQNIDAALNNGLVTNSKLTNSVG FT VNVRF" FT misc_feature 801764..802126 FT /locus_tag="VSAL_I0716" FT /note="HMMPfam hit to PF02082, Transcriptional FT regulator,score 3.9e-50" FT /inference="protein motif:HMMPfam:PF02082" FT sig_peptide 801764..801826 FT /locus_tag="VSAL_I0716" FT misc_feature 801839..801904 FT /locus_tag="VSAL_I0716" FT /note="Predicted helix-turn-helix motif with score FT 1222.000, SD 3.35 at aa 26-47, sequence FT VPLADISERQGISLSYLEQLFS" FT misc_feature 801908..801964 FT /locus_tag="VSAL_I0716" FT /note="PS01332 Uncharacterized protein family UPF0074 FT signature." FT /inference="protein motif:ProSite:PS01332" FT CDS 802296..803516 FT /transl_table=11 FT /gene="iscS" FT /locus_tag="VSAL_I0717" FT /old_locus_tag="TVS0561" FT /product="cysteine desulfurase" FT /EC_number="2.8.1.7" FT /db_xref="GOA:B6EGX5" FT /db_xref="InterPro:IPR000192" FT /db_xref="InterPro:IPR010240" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR016454" FT /db_xref="InterPro:IPR020578" FT /db_xref="UniProtKB/TrEMBL:B6EGX5" FT /protein_id="CAQ78402.1" FT /translation="MKMKLPIYFDYSATCPVDKRVADKMVQHMTMDGCFGNPASRSHRY FT GWQAEEAVDTARDNIAALLNADPREIVFTSGATESDNLAIKGAAHFYHKKGKHVITCKT FT EHKAVLDPCRQLEREGYEVTYLDPESNGLVDFAKLEAAMREDTVLVSIMHVNNEIGVIQ FT DITAIGELCRSRKIVFHVDAAQSAGKIPLDVQEVKVDLISLSAHKMYGPKGIGALYVRR FT KPRIRLEAQMHGGGHERGFRSGTLATHQIVGMGEACRIAKEEMQKDYDHCLAMRDRLLD FT GVKDMEAVHINGDLDQRVPHNLNISFEFVEGESLLMALKDLAVSSGSACTSASLEPSYV FT LRALGLNDELAHSSIRFSFGRYTTAEDIDHAITQISQAVNKLRDMSPLWDMYKEGIDLN FT TVEWAHH" FT misc_feature 802314..803408 FT /gene="iscS" FT /locus_tag="VSAL_I0717" FT /note="HMMPfam hit to PF00266, Aminotransferase FT class-V,score 3.4e-119" FT /inference="protein motif:HMMPfam:PF00266" FT misc_feature 802443..803192 FT /gene="iscS" FT /locus_tag="VSAL_I0717" FT /note="HMMPfam hit to PF01212, Beta-eliminating lyase,score FT 0.00059" FT /inference="protein motif:HMMPfam:PF01212" FT misc_feature 802890..802949 FT /gene="iscS" FT /locus_tag="VSAL_I0717" FT /note="PS00595 Aminotransferases class-V FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00595" FT CDS 803550..803927 FT /transl_table=11 FT /locus_tag="VSAL_I0718" FT /old_locus_tag="TVS0562" FT /product="putative iron-sulphur cluster biosynthesis FT protein" FT /note="Weakly similar to chain A, solution structure of FT iron-sulfur cluster assembly protein SufU From Bacillus FT subtilis (pdb 2AZ) identity=(33, 86)" FT /db_xref="GOA:B6EGX6" FT /db_xref="InterPro:IPR002871" FT /db_xref="InterPro:IPR011339" FT /db_xref="UniProtKB/TrEMBL:B6EGX6" FT /protein_id="CAQ78403.1" FT /translation="MAYSEKVIDHYENPRNVGSFEKDDPSVGSGMVGAPACGDVMKLQI FT KVSPEGIIEDAKFKTYGCGSAIASSSLVTEWVKGKTLDEAAALKNAEIAEELELPPVKV FT HCSILAEDAIKAAVLDYRNKH" FT misc_feature 803553..803924 FT /locus_tag="VSAL_I0718" FT /note="HMMPfam hit to PF01592, NifU-like N terminal domain, FT score 3.3e-77" FT /inference="protein motif:HMMPfam:PF01592" FT CDS 804048..804371 FT /transl_table=11 FT /gene="iscA" FT /locus_tag="VSAL_I0719" FT /old_locus_tag="TVS0563" FT /product="iron-binding protein IscA (iron-sulfur cluster FT assembly protein)" FT /db_xref="GOA:B6EGX7" FT /db_xref="InterPro:IPR000361" FT /db_xref="InterPro:IPR011302" FT /db_xref="InterPro:IPR016092" FT /db_xref="InterPro:IPR017870" FT /db_xref="UniProtKB/TrEMBL:B6EGX7" FT /protein_id="CAQ78404.1" FT /translation="MAISVTEAAASRVQTFLENRGKGIGLRLGVRTSGCSGMAYILEFV FT DDLNEEDEVFEKFGVKIIIDPKSLAYMDGTELDFAKEGLNEGFKFNNPNVKSECGCGES FT FNV" FT misc_feature 804054..804326 FT /gene="iscA" FT /locus_tag="VSAL_I0719" FT /note="HMMPfam hit to PF01521, Iron-sulphur cluster FT biosynthesis, score 4.8e-39" FT /inference="protein motif:HMMPfam:PF01521" FT misc_feature 804309..804362 FT /gene="iscA" FT /locus_tag="VSAL_I0719" FT /note="PS01152 Hypothetical hesB/yadR/yfhF family FT signature." FT /inference="protein motif:ProSite:PS01152" FT CDS 804387..804902 FT /transl_table=11 FT /gene="hscB" FT /locus_tag="VSAL_I0720" FT /old_locus_tag="TVS0564" FT /product="Co-chaperone protein HscB" FT /db_xref="GOA:B6EGX8" FT /db_xref="InterPro:IPR001623" FT /db_xref="InterPro:IPR004640" FT /db_xref="InterPro:IPR009073" FT /db_xref="UniProtKB/Swiss-Prot:B6EGX8" FT /protein_id="CAQ78405.1" FT /translation="MNHFELFGLPNQFELDGGLLSAQFLELQKRFHPDNFATSSERDRL FT LSVQKAAQINDAYQTLKNPVTRAEYILSEQGHDIRGEQTTMQDPMFLMQQMELREDLED FT LLSSSDPESALFDFSENVSAMRKTQLAELKQQLESELWQEAAQSVRKLKFIDKLNQEVE FT KLEDKLLG" FT misc_feature 804390..804599 FT /gene="hscB" FT /locus_tag="VSAL_I0720" FT /note="HMMPfam hit to PF00226, DnaJ domain, score 5e-09" FT /inference="protein motif:HMMPfam:PF00226" FT misc_feature 804642..804878 FT /gene="hscB" FT /locus_tag="VSAL_I0720" FT /note="HMMPfam hit to PF07743, HSCB C-terminal FT oligomerisation domain, score 1.4e-33" FT /inference="protein motif:HMMPfam:PF07743" FT CDS 804938..806791 FT /transl_table=11 FT /gene="hscA" FT /locus_tag="VSAL_I0721" FT /old_locus_tag="TVS0565" FT /product="chaperone protein HscA" FT /db_xref="GOA:B6EGX9" FT /db_xref="InterPro:IPR001023" FT /db_xref="InterPro:IPR010236" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="UniProtKB/Swiss-Prot:B6EGX9" FT /protein_id="CAQ78406.1" FT /translation="MAFLQISEPGQSAAPHQHKLAVGIDLGTTNSLVASVRSGEANTLP FT DMKGNVILPSVVQYQDDKICVGANAYQSAASDPQNTIISVKRLMGRSLKDIQTRYPDLP FT YQFTESDNGLPVIHTTQGDVNPIQVSAEILKSLSNRAEVTLGGSLEGVVITVPAYFDDA FT QRAGTKDAATLAGLNVLRLLNEPTAAAIAYGLDSGQEGIIAVYDLGGGTFDISILRLSK FT GVFEVLATGGDSALGGDDFDHVLSQWIKDQAEITTALSNQEQRELLTLATETKVALSDA FT DSVTVSFKEWSGTITADIFNQLIQSLVKKTLMACRRALKDADISSEDVMEVVMVGGSTR FT TPIVRRSVGDYFAKTPLTSIDPDQVVAIGAAIQADILVGNKPDTEMLLLDVIPLSLGIE FT TMGGLVEKIIPRNTTIPVAKAQEFTTFKDGQTGMMVHVVQGEREMVEDGRSLARFSLKG FT IPPMTAGAAHIRVTYQVDADGLLSVTAMEKSTGVQSHIQVKPSYGLSDNEVATMLKDSM FT TYAKDDMKARALAEQQVEADRVIEGLVVALNNDGDALLSKEEQTVILQAVEALITVRKG FT TDTQAIEDGIKHADEASQEFAARRMDASIRAALAGQSIDEV" FT misc_feature 804998..806743 FT /gene="hscA" FT /locus_tag="VSAL_I0721" FT /note="HMMPfam hit to PF00012, Hsp70 protein, score FT 7.3e-236" FT /inference="protein motif:HMMPfam:PF00012" FT misc_feature 805007..805030 FT /gene="hscA" FT /locus_tag="VSAL_I0721" FT /note="PS00297 Heat shock hsp70 proteins family signature FT 1." FT /inference="protein motif:ProSite:PS00297" FT misc_feature 805550..805591 FT /gene="hscA" FT /locus_tag="VSAL_I0721" FT /note="PS00329 Heat shock hsp70 proteins family signature FT 2." FT /inference="protein motif:ProSite:PS00329" FT CDS 806794..807132 FT /transl_table=11 FT /gene="fdx" FT /locus_tag="VSAL_I0722" FT /old_locus_tag="TVS0566" FT /product="2Fe-2S ferredoxin" FT /db_xref="GOA:B6EGY0" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR001055" FT /db_xref="InterPro:IPR011536" FT /db_xref="InterPro:IPR012675" FT /db_xref="InterPro:IPR018298" FT /db_xref="UniProtKB/TrEMBL:B6EGY0" FT /protein_id="CAQ78407.1" FT /translation="MPKIIVLPHSELCPDGAVLEANEGDTVLDVALKNGIAIEHACEKS FT CACTTCHIVIREGFDSLEESDELEDDMLDKAWGLEPESRLGCQARMAKQDLVVEIPKYT FT LNLASEEH" FT misc_feature 806821..807072 FT /gene="fdx" FT /locus_tag="VSAL_I0722" FT /note="HMMPfam hit to PF00111, 2Fe-2S iron-sulfur cluster FT binding domain, score 2.4e-21" FT /inference="protein motif:HMMPfam:PF00111" FT misc_feature 806917..806949 FT /gene="fdx" FT /locus_tag="VSAL_I0722" FT /note="PS00814 Adrenodoxin family, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00814" FT CDS 807261..807461 FT /transl_table=11 FT /locus_tag="VSAL_I0723" FT /old_locus_tag="TVS0567" FT /product="iron-sulfur cluster assembly protein" FT /note="Similar to hypothetical protein yfhJ (PDB 1UJ8). FT Evalue=6e-20, identity=(38, 62). Member of the ISC FT machinery of E.coli involved in assembly of iron-sulfur FT clusters" FT /db_xref="GOA:B6EGY1" FT /db_xref="InterPro:IPR007479" FT /db_xref="UniProtKB/TrEMBL:B6EGY1" FT /protein_id="CAQ78408.1" FT /translation="MSLKWIDSQDIAIELVEKYPEVDPKTVRFTDLLEWILELDDFDDD FT PKHSGEKVLEAIILCWMDEWD" FT misc_feature 807267..807458 FT /locus_tag="VSAL_I0723" FT /note="HMMPfam hit to PF04384, Protein of unknown function FT (DUF528), score 9.8e-39" FT /inference="protein motif:HMMPfam:PF04384" FT CDS 807699..808985 FT /transl_table=11 FT /gene="pepB" FT /locus_tag="VSAL_I0724" FT /old_locus_tag="TVS0568" FT /product="peptidase B (aminopeptidase B)" FT /EC_number="3.4.11.23" FT /db_xref="GOA:B6EGY2" FT /db_xref="InterPro:IPR000819" FT /db_xref="InterPro:IPR008330" FT /db_xref="InterPro:IPR011356" FT /db_xref="UniProtKB/TrEMBL:B6EGY2" FT /protein_id="CAQ78409.1" FT /translation="MSQKMTVQLSNTKALAHWGNNALLSFTTEGAVIHNTDNDVYSTVQ FT RAARKLNTQGIVDVALDGASWDLESIWSFIQGFRGSKSNNDIAWNSLSDHDEKELNARI FT LTTNWTRDIINKTAEEVAPRQLASMAAEFIKSVAPEGTVKAKIVKDKDLLTEGWTGTYA FT VGRGSERTSAMLQLDYNPTGDENTPVYACLVGKGITFDSGGYSIKPSGGMASMKADMGG FT AALVTAGLAMSILRGLDKRVKLILCCAENMISGRALKLGDIITYKNGKTVEILNTDAEG FT RLVLADGLQFASEQTPELIIDCATLTGSAKMAVGNDFHSLLSFDEKLSQQALISAQEEN FT EGLWRLPLMEFHREMLPSNFADLANIGSGAYSPGASTAAGFLSYFVDDYKKGWLHMDCS FT ATYRTAPSDKWSAGATGVGVRTLANILTK" FT misc_feature 808017..808970 FT /gene="pepB" FT /locus_tag="VSAL_I0724" FT /note="HMMPfam hit to PF00883, Cytosol aminopeptidase FT family, catalyti, score 1.6e-135" FT /inference="protein motif:HMMPfam:PF00883" FT misc_feature 808524..808547 FT /gene="pepB" FT /locus_tag="VSAL_I0724" FT /note="PS00631 Cytosol aminopeptidase signature." FT /inference="protein motif:ProSite:PS00631" FT CDS 809074..809508 FT /transl_table=11 FT /gene="ndk" FT /locus_tag="VSAL_I0725" FT /old_locus_tag="TVS0569" FT /product="nucleoside diphosphate kinase" FT /EC_number="2.7.4.6" FT /db_xref="GOA:B6EGY3" FT /db_xref="InterPro:IPR001564" FT /db_xref="InterPro:IPR023005" FT /db_xref="UniProtKB/Swiss-Prot:B6EGY3" FT /protein_id="CAQ78410.1" FT /translation="MTIERTFSIVKPDAVKRNLIGAIYRRIEKTGMQVVAAKMLSLTKE FT QAQGFYAEHEGKEFFDALVEYMTSGPVMVQVLEGESVITRYRELMGKTNPDEAACGSLR FT SDYAISMRYNSVHGSDSPESAAREIAYFFVEDEICPRPAE" FT misc_feature 809083..809487 FT /gene="ndk" FT /locus_tag="VSAL_I0725" FT /note="HMMPfam hit to PF00334, Nucleoside diphosphate FT kinase, score 7.7e-79" FT /inference="protein motif:HMMPfam:PF00334" FT misc_feature 809413..809439 FT /gene="ndk" FT /locus_tag="VSAL_I0725" FT /note="PS00469 Nucleoside diphosphate kinases active site." FT /inference="protein motif:ProSite:PS00469" FT CDS 809739..810890 FT /transl_table=11 FT /locus_tag="VSAL_I0726" FT /old_locus_tag="TVS0570" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EGY4" FT /db_xref="InterPro:IPR004383" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/Swiss-Prot:B6EGY4" FT /protein_id="CAQ78411.1" FT /translation="MTTTKTNLLDFDRKGLRAFFSEELGEKAFRADQIMKWMYHFGCDD FT FDQMNNINKKLREKLKQKCEIRAPYVSEAQHSVDGTIKWAMKVGDQDVETVYIPDGDRA FT TLCVSSQVGCALACTFCSTAQQGFNRNLKVSEIVGQIWRAAREIGLEKETGRRPITNVV FT MMGMGEPLLNMKNLMPSLDIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGKVDVALAIS FT LHAPTDKLRSEIMPINDRWNIEAFLACVREYIASSNANRGRVTVEYVLLDHINDDMDHA FT RQLAELLKDTPAKINLIPFNPYPGSPYKKPSNSRIDRFMKTLMEYDFTVTVRRTRGDDI FT DAACGQLVGDVIDRTKRTQVKQQGEAIPVKLFNLDVLQQGKAE" FT misc_feature 810060..810593 FT /locus_tag="VSAL_I0726" FT /note="HMMPfam hit to PF04055, Radical SAM FT superfamily,score 1e-10" FT /inference="protein motif:HMMPfam:PF04055" FT CDS 810887..811648 FT /transl_table=11 FT /locus_tag="VSAL_I0727" FT /old_locus_tag="TVS0571" FT /product="putative type 4 fimbrial biogenesis protein PilF" FT /db_xref="GOA:B6EGY5" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR013360" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:B6EGY5" FT /protein_id="CAQ78412.1" FT /translation="MIKWSAAWLAIGLLTSAGCVTVNEADEMTDDEIIRASEARITLGL FT GYLNAGNMMKARENLELAAQYAPDYYRSQTSLAYYYQQVEENELAEKAYKRALRYSSKN FT GNVLNDYGVFLCRKGRYEEAQQKFTLAIEQPYYYLVSASYENAAMCALSSGDNVTAKTY FT FERSLAHDPHRVRSTLQLAKLNIDEGNYSEPRISLFKFNKKYGYKPVSLSLLIELEKKA FT GNAHLVTKYANILGQKYPDSKEYQTYINHDY" FT sig_peptide 810887..810952 FT /locus_tag="VSAL_I0727" FT misc_feature 810911..810943 FT /locus_tag="VSAL_I0727" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 810995..811096 FT /locus_tag="VSAL_I0727" FT /note="HMMPfam hit to PF00515, Tetratricopeptide FT repeat,score 0.16" FT /inference="protein motif:HMMPfam:PF00515" FT misc_feature 811097..811198 FT /locus_tag="VSAL_I0727" FT /note="HMMPfam hit to PF00515, Tetratricopeptide FT repeat,score 0.049" FT /inference="protein motif:HMMPfam:PF00515" FT misc_feature 811307..811408 FT /locus_tag="VSAL_I0727" FT /note="HMMPfam hit to PF00515, Tetratricopeptide FT repeat,score 0.16" FT /inference="protein motif:HMMPfam:PF00515" FT CDS 811638..812528 FT /transl_table=11 FT /locus_tag="VSAL_I0728" FT /old_locus_tag="TVS0572" FT /product="putative membrane protein" FT /db_xref="GOA:B6EGY6" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:B6EGY6" FT /protein_id="CAQ78413.1" FT /translation="MTIEHTEDNIETIIAPGQLLKNAREASNLTLEDISARLRLRVEVL FT EQIEADQFDMGKLATFTRGYYRSYAKAVNVPEMAVLNGLDILGKAQIEEHDMQSFSRKT FT KREKHDNRIMKLTWVIFALILSMSVLWWWQEQAQFETAEATSHVEEINKEEAVIVDELA FT DSSTESAVALDDGIDTLESSDTVAAPLAEITVTDEATDSVETPTVSEQAQEAIITDDVV FT ITFNSDCWLQVKDAANNRLYSGVKKSNQTLKLTGKAPYELVIGAPNAVTLSYKGKPVNL FT SAYPAGKVARLTLPQ" FT misc_feature 811983..812036 FT /locus_tag="VSAL_I0728" FT CDS 812541..813659 FT /transl_table=11 FT /gene="ispG" FT /locus_tag="VSAL_I0729" FT /old_locus_tag="TVS0573" FT /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate FT synthase" FT /EC_number="1.17.4.3" FT /db_xref="GOA:B6EGY7" FT /db_xref="InterPro:IPR004588" FT /db_xref="InterPro:IPR011005" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR016425" FT /db_xref="UniProtKB/Swiss-Prot:B6EGY7" FT /protein_id="CAQ78414.1" FT /translation="MHIESPIKRRQSTRIYVGNVPIGDGAPIAVQSMTNTLTTDVAATV FT AQINALQKVGADIVRVSVPTMDAAEAFKLIKQQVSVPLVADIHFDYRIALKVAEYGVDC FT LRINPGNIGNEQRIRSVVDCARDNNIPIRIGVNGGSLEKDIQAKYKEPTAEALLESAMR FT HVDILDRMNFDQFKVSVKASDVFLAVDSYRLLAKQIVQPLHLGITEAGGARAGSVKSAV FT GLGLLLSEGIGDTLRISLAADPIEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVI FT ATVNELEQRLEDLITPMDVSLIGCVVNGPGEAEVSHMGIAGSYRKSAFYEDGIRQKERF FT DNDNIVDKLEARIRAKAAMLSKENQIDINQID" FT misc_feature 812565..813623 FT /gene="ispG" FT /locus_tag="VSAL_I0729" FT /note="HMMPfam hit to PF04551, GcpE protein, score FT 6.5e-236" FT /inference="protein motif:HMMPfam:PF04551" FT CDS 813694..814968 FT /transl_table=11 FT /gene="hisS" FT /locus_tag="VSAL_I0730" FT /old_locus_tag="TVS0574" FT /product="histidyl-tRNA synthetase" FT /EC_number="6.1.1.21" FT /db_xref="GOA:B6EGY8" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR004154" FT /db_xref="InterPro:IPR004516" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR015807" FT /db_xref="UniProtKB/TrEMBL:B6EGY8" FT /protein_id="CAQ78415.1" FT /translation="MNVAKAIQAIRGMNDCLPTQSPLWHKVEDSVKRVISAYGYSEIRM FT PIVEQTHLFKRAIGEVTDVVEKEMYTFDDRNGDSLALRPEGTAGCVRAGIENGLLYNQE FT QRLWYMGPMFRHERPQKGRYRQFHQVGVEVFGLNGPDVDAELIMMTARLWRELGIDKHV FT HLELNSIGSLEARANYRVVLIEFLEQHLDILDEDCKRRMYTNPMRVLDTKNPAVQAILG FT DAPKLSEYLDDDSKAHFSGLCELLDAAGIQYQVNERLVRGLDYYNRTVFEWVTESLGAQ FT GTVCAGGRYDGLVEQLGGKETSAVGFAMGLERLVLLMETLELTDVRRSVDIYMVTSGAD FT TLMAGMKLAERLREQVPGLRVMCHFGGGNFKKQFKRADNAGAAVALILGESEVAELTVN FT VKDLRTGEQETFAQADVFAKLAELI" FT misc_feature 813760..814263 FT /gene="hisS" FT /locus_tag="VSAL_I0730" FT /note="HMMPfam hit to PF00587, tRNA synthetase class II FT core domain (, score 7.3e-54" FT /inference="protein motif:HMMPfam:PF00587" FT misc_feature 814615..814644 FT /gene="hisS" FT /locus_tag="VSAL_I0730" FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT /inference="protein motif:ProSite:PS00339" FT misc_feature 814684..814962 FT /gene="hisS" FT /locus_tag="VSAL_I0730" FT /note="HMMPfam hit to PF03129, Anticodon binding FT domain,score 3.9e-12" FT /inference="protein motif:HMMPfam:PF03129" FT CDS 814980..815591 FT /transl_table=11 FT /locus_tag="VSAL_I0731" FT /old_locus_tag="TVS0575" FT /product="putative outer membrane protein" FT /db_xref="GOA:B6EGY9" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR018704" FT /db_xref="UniProtKB/TrEMBL:B6EGY9" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ78416.1" FT /translation="MEAYETEEQQVEAIKSWWKENGKAVVIGGVVGIGAILGWKYYQSM FT QVTAKETASAGYERTLTALHTSGAKAEETTQTFIAAHAKSEYAALAALQLAKVQVEANQ FT LDAALEQLIWISNNSKDDALVAMAQVRAARIQAEQNKFDAALTTLAGVKSTSWSARVAE FT LKGDIALSQGDIATARSEYTESLQDGMNPSVQMKLDDLAE" FT CDS 815602..816759 FT /transl_table=11 FT /gene="yfgL" FT /locus_tag="VSAL_I0732" FT /old_locus_tag="TVS0576" FT /product="lipoprotein precursor" FT /note="Similar to Methylophilus methylotrophus quinoprotein FT methanol dehydrogenase (PDB 1G72). Evalue=9e-06, FT identity=(42, 152)" FT /db_xref="InterPro:IPR002372" FT /db_xref="InterPro:IPR011047" FT /db_xref="InterPro:IPR017687" FT /db_xref="InterPro:IPR018391" FT /db_xref="UniProtKB/TrEMBL:B6EGZ0" FT /protein_id="CAQ78417.1" FT /translation="MRKVLKKAALCTFGFSMLVGCASEEDTIVMAPVPVVQNQFEPTTE FT WTSSIGDGVGHYFSRLTPAYAYDKIYVASRDGLVKALDPKNGKTIWEQDLEQDDTARLS FT GGLTLTYGKVFIGSENGEIITLDAETGEELWREKVDGEVIAKPLADEGYVIVHTSRGAL FT VAFDAETGTEKWEINSEVPSLTLRGDSAPVSISGGVFWGMSNGRLAAALMSKGQLLWQQ FT PVGTPKGATEIDRLVDVDSSPLILGGRLYTIGYNGQLIALDLRTGQPAWKRNYSSAMDM FT STDGKRLFLVTEKDHVVAVDARSGTELWNNKELEYRQLTSPIIIDNYVVLADNEGYLHW FT LDKESGLFVSQQEIDSDGIAVSPIVVGDSFLIVTREGDIKKMRIK" FT sig_peptide 815602..815667 FT /gene="yfgL" FT /locus_tag="VSAL_I0732" FT misc_feature 815632..815664 FT /gene="yfgL" FT /locus_tag="VSAL_I0732" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 815803..815916 FT /gene="yfgL" FT /locus_tag="VSAL_I0732" FT /note="HMMPfam hit to PF01011, PQQ enzyme repeat, score FT 2.6e-06" FT /inference="protein motif:HMMPfam:PF01011" FT misc_feature 815935..816048 FT /gene="yfgL" FT /locus_tag="VSAL_I0732" FT /note="HMMPfam hit to PF01011, PQQ enzyme repeat, score FT 1.3e-07" FT /inference="protein motif:HMMPfam:PF01011" FT CDS 816940..818442 FT /transl_table=11 FT /locus_tag="VSAL_I0733" FT /old_locus_tag="TVS0577" FT /product="GTP-binding protein" FT /note="Similar to Thermotoga maritima Der, a switch protein FT containing two GTPase domains (PDB 1X1L). Evalue=5e-61, FT identity=(153, 471). Expression may be stress-induced" FT /db_xref="GOA:B6EGZ1" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR015946" FT /db_xref="InterPro:IPR016484" FT /db_xref="UniProtKB/Swiss-Prot:B6EGZ1" FT /protein_id="CAQ78418.1" FT /translation="MIPVVALVGRPNVGKSTLFNRVTRTRDALVADFPGLTRDRKYGRA FT KLEEQEFILIDTGGIDGTEEGVETKMAEQSLAAIEEADVVLFMVDGRAGLTSSDEAIAK FT HLRSREKPTFLVVNKIDGIDADAASAEFWQLGMSKVYQIAASHGRGVTSLLELALAPFM FT EELVEESLRDENGEITDLTEFEDFEDEEKDLTEEDAEKDFARLQDQPIKLAIIGRPNVG FT KSTLINRILGEERVVVYDMPGTTRDSIYIPMEREGQEYVLIDTAGVRRRGRINETVEKF FT SVIKTLKAIEDANVVLLVIDARENISDQDLSLLGFALNAGRSLVIAVNKWDGLNNEVKE FT KVKSELDRRLGFVDFARLHFISALHGTGVGHLYESVQEAYVSATKRVGTSVLTRVMKMA FT QDDHQPPMVRGRRVKLKYAHAGGYNPPLIVIHGNQVKELPSSYKRFLMNYFRKSLEIMG FT TPIRIQFQNSENPFEDRGGKLTLSQERQRKRLVGAVKNRNKK" FT misc_feature 816946..817302 FT /locus_tag="VSAL_I0733" FT /note="HMMPfam hit to PF01926, GTPase of unknown FT function,score 7.8e-48" FT /inference="protein motif:HMMPfam:PF01926" FT misc_feature 816964..816987 FT /locus_tag="VSAL_I0733" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 817570..817935 FT /locus_tag="VSAL_I0733" FT /note="HMMPfam hit to PF01926, GTPase of unknown FT function,score 1.2e-44" FT /inference="protein motif:HMMPfam:PF01926" FT misc_feature 817588..817611 FT /locus_tag="VSAL_I0733" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 818497..819372 FT /transl_table=11 FT /locus_tag="VSAL_I0734" FT /old_locus_tag="TVS0578" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EGZ2" FT /protein_id="CAQ78419.1" FT /translation="MTQFFSTDVLFCHQTWQHTSEIQLIKKTEQGQWLVVKETPFHPVS FT HIWPDHPEDKGTISTRSNEYPVLACHTAAIELSTGTLYTNKEIPIKRGEEGWVFVVAHL FT VESAVPVSLGDSIELTVDEEHQKALSRGHSAGHIAYLALNKALHAKYWRKDADRKDELG FT HYNFNNYAQVTSFVTEDNCEDIYRLGKTLRKRGLNSVEMLDDLSAIEHQINQQIKEWLS FT LGSKVSMKCDGKALTDSRYWIADFGIDGSAKLPCGGTHVASFDEYQEIKVQLQVQGEQE FT LLMITQSIKR" FT CDS 819669..819905 FT /transl_table=11 FT /locus_tag="VSAL_I0735" FT /old_locus_tag="TVS0579" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR010807" FT /db_xref="UniProtKB/TrEMBL:B6EGZ3" FT /protein_id="CAQ78420.1" FT /translation="MQVNQCPSCQSELRWQKEGYHCDFCQVDFKKIAHCPDCNKEMEKL FT NACGAANYFCHECNELKSKSRVKTELVQLSDKL" FT misc_feature 819675..819884 FT /locus_tag="VSAL_I0735" FT /note="HMMPfam hit to PF07191, Protein of unknown function FT (DUF1407), score 1.1e-30" FT /inference="protein motif:HMMPfam:PF07191" FT CDS complement(819907..821241) FT /transl_table=11 FT /gene="xseA" FT /locus_tag="VSAL_I0736" FT /old_locus_tag="TVS0580" FT /product="exodeoxyribonuclease VII large subunit" FT /EC_number="3.1.11.6" FT /db_xref="GOA:B6EGZ4" FT /db_xref="InterPro:IPR003753" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR020579" FT /db_xref="UniProtKB/Swiss-Prot:B6EGZ4" FT /protein_id="CAQ78421.1" FT /translation="MSLDSNPRIFTVSRLNSEVRLLLENEMGIVWLVGEVSNLTMPVSG FT HWYLTLKDSQAQVKCAMFKGNNRRVTFKPQNGKQVLVKARLSLYEPRGDYQLIIESMQA FT EGDGRLQQEFDHLKMSLAAEGLFAQTAKKALPEQPKCVGIITSKTGAALFDILNVLKRR FT DPNLPVIIYPTLVQGTNAAIQIAQAIGRANSRNECDILIVGRGGGSLEDLWCFNEEIVA FT RTIAASQIPIVSAVGHEIDVTIADFVADVRAPTPSAAAELVSRDLSSQLQIVSHQKRRL FT RSAIERYLSQQQKRLSTYQFRIEKQHPQLQLNTQSQRLDDLNQRLENHIQQRLERNQHK FT IENLSLRLSNLSPARKVHQDKQRIETLKRRLLDSMDRNLLMQRHQLALAAEKLDTVSPL FT ATLKRGYSITRNASGSLITSTQQVHTGDTITTRFVDGEVQSTVDK" FT misc_feature complement(820123..820650) FT /gene="xseA" FT /locus_tag="VSAL_I0736" FT /note="HMMPfam hit to PF02601, Exonuclease VII, large FT subunit, score 6e-60" FT /inference="protein motif:HMMPfam:PF02601" FT misc_feature complement(820927..821154) FT /gene="xseA" FT /locus_tag="VSAL_I0736" FT /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding FT domain, score 2.5e-11" FT /inference="protein motif:HMMPfam:PF01336" FT CDS 821451..822914 FT /transl_table=11 FT /gene="guaB" FT /locus_tag="VSAL_I0737" FT /old_locus_tag="TVS0581" FT /product="inosine-5'-monophosphate dehydrogenase" FT /EC_number="1.1.1.205" FT /db_xref="GOA:B6EGZ5" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR001093" FT /db_xref="InterPro:IPR005990" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR015875" FT /db_xref="InterPro:IPR018529" FT /db_xref="UniProtKB/TrEMBL:B6EGZ5" FT /protein_id="CAQ78422.1" FT /translation="MLRIAKEALTFDDVLLVPAHSTVLPNTADIRTQLTKSISLNIPMI FT SASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAEEVRLVKIFEAGVVSAPVTVRPDA FT TIQDVKDLTEKHGFAGFPVVTETNELVGIITGRDVRFVTDLSKKVDVVMTPKSRLASVK FT EGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKAERKPNACKDERGRLRVGA FT AVGAGAGNEERVAALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAFPDLQIIGGNVATG FT LGAQALIDAGVSAVKVGIGPGSICTTRIVTGVGVPQITAISDAAEVANAHGIPVIADGG FT IRYSGDICKAIAAGASCVMVGSMFAGTEEAPGEVILFQGRSYKSYRGMGSLGAMSQGSS FT DRYFQSDNAADKLVPEGIEGRIAYRGRLKEIVHQQMGGLRSSMGLTGSATIEDMRTKAE FT FVIISGAGMKESHVHDVQITKEAPNYRLG" FT misc_feature 821469..822869 FT /gene="guaB" FT /locus_tag="VSAL_I0737" FT /note="HMMPfam hit to PF00478, IMP dehydrogenase / GMP FT reductase domain, score 8.8e-241" FT /inference="protein motif:HMMPfam:PF00478" FT misc_feature 821721..822068 FT /gene="guaB" FT /locus_tag="VSAL_I0737" FT /note="HMMPfam hit to PF00571, CBS domain pair, score FT 2.7e-22" FT /inference="protein motif:HMMPfam:PF00571" FT misc_feature 822333..822371 FT /gene="guaB" FT /locus_tag="VSAL_I0737" FT /note="PS00487 IMP dehydrogenase / GMP reductase FT signature." FT /inference="protein motif:ProSite:PS00487" FT CDS 823131..824684 FT /transl_table=11 FT /gene="guaA" FT /locus_tag="VSAL_I0738" FT /old_locus_tag="TVS0582" FT /product="GMP synthase [glutamine-hydrolyzing]" FT /EC_number="6.3.5.2" FT /note="The CDS appears to have a deletion of 8 amino acid FT residues after codon 129 in comparison to the E.coli FT orthologue" FT /db_xref="GOA:B6EGZ6" FT /db_xref="InterPro:IPR001674" FT /db_xref="InterPro:IPR004739" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR017926" FT /db_xref="InterPro:IPR022310" FT /db_xref="InterPro:IPR022955" FT /db_xref="UniProtKB/Swiss-Prot:B6EGZ6" FT /protein_id="CAQ78423.1" FT /translation="MTTNIHAQRILILDFGSQYTQLVARRIREIGVYCELWSWDVEESD FT IRDFNPDGIILSGGPESVTEANSPRAPQYVFDSGVPVFGVCYGMQTMAEQLGGKVATST FT EREFGYAAVQVTGESALFKDLEATQDVWMSHGDKVVEIPSDFVKIAETETCPYAAMANE FT EKKYYGVQFHPEVTHTKNGLKMLENFVLNVCGCEGLWTSASIIEDAIARIKEQVGDDEV FT ILGLSGGVDSSVVAMLAHRAIGDKLTCVFVDNGLLRLNEAEQVMEMFSEGFGLKIIHVE FT AEERFLSALSGESDPEAKRKIIGHVFVDIFDEESKKLSNAKWLAQGTIYPDVIESAASK FT TGKAHVIKSHHNVGGLPDDMEMGLVEPLRELFKDEVRKIGLELGLPYNMLYRHPFPGPG FT LGVRVLGEVKKEYCDLLRRADAIFIEELHNADLYNKVSQAFTVFLPVRSVGVMGDGRKY FT DWVVSLRAVETIDFMTAHWAHLPYDFLGKVSNRIINEVGGISRVVYDISGKPPATIEWE FT " FT misc_feature 823161..823709 FT /gene="guaA" FT /locus_tag="VSAL_I0738" FT /note="HMMPfam hit to PF00117, Glutamine amidotransferase FT class-I, score 5.7e-56" FT /inference="protein motif:HMMPfam:PF00117" FT misc_feature 823371..823406 FT /gene="guaA" FT /locus_tag="VSAL_I0738" FT /note="PS00442 Glutamine amidotransferases class-I active FT site." FT /inference="protein motif:ProSite:PS00442" FT misc_feature 823791..824282 FT /gene="guaA" FT /locus_tag="VSAL_I0738" FT /note="HMMPfam hit to PF06508, ExsB, score 0.0026" FT /inference="protein motif:HMMPfam:PF06508" FT misc_feature 824400..824678 FT /gene="guaA" FT /locus_tag="VSAL_I0738" FT /note="HMMPfam hit to PF00958, GMP synthase C terminal FT domain, score 4.7e-58" FT /inference="protein motif:HMMPfam:PF00958" FT CDS 824963..826522 FT /transl_table=11 FT /locus_tag="VSAL_I0739" FT /old_locus_tag="TVS0583" FT /product="putative ion transporter" FT /note="Expression may be regulated by Fur" FT /db_xref="InterPro:IPR004697" FT /db_xref="UniProtKB/TrEMBL:B6EGZ7" FT /protein_id="CAQ78424.1" FT /translation="MSNQSTEKAPKLSAMDRFLNTIERVGNKIPDPALLFFWGLLIVWG FT LSALLSQINFDLIHPVTQDAVQVKNLLTGDSLANFLATMVTNFTSFAPLGIVLVAMLGV FT GVADSSGFIQTGLKKMLNFTPAKLLTPMLVLVAIVSHTAADAGYVLVIPLGGIIFHAAG FT RHPLAGIAAAFAGVSGGFSANFIPSGIDPLLAGFTQTAAQVLDQSYVVNPLANIFFTGL FT SSVLIVAIGWYVTEKIIEPRLANTPVDKDAEEAPDLGSFTEIESKAFKYAGWAMVAGIA FT LLIALIYPEGSALRSPEGEITSFSAPLMKSIVPLIFILFVIPGIVFGRVSGKFKSSNDV FT IKAMSETMGTMGAYMVMSFFCAQFLVAFSQSNIGTILAMYGADFLKALDLPGQLTIVGM FT ILLTAFVNLLIGSASAKWALIGPVLVPMLMGVGISPELSQAAYRVGDSVSNIISPLMVF FT FPLVVVYCQRYVKSTGIGTLASLMMPFSIAMLIGWTIFLLAYWALGIPLGIQAPYTYQL FT PG" FT misc_feature 825011..826507 FT /locus_tag="VSAL_I0739" FT /note="HMMPfam hit to PF03806, AbgT putative transporter FT family, score 0" FT /inference="protein motif:HMMPfam:PF03806" FT misc_feature 825047..826447 FT /locus_tag="VSAL_I0739" FT /note="HMMPfam hit to PF03606, C4-dicarboxylate anaerobic FT carrier, score 0.0039" FT /inference="protein motif:HMMPfam:PF03606" FT misc_feature order(825059..825127,825215..825283,825320..825388, FT 825398..825451,825464..825532,825590..825658, FT 825773..825841,825884..825952,826013..826081, FT 826124..826192,826211..826264,826292..826360, FT 826421..826489) FT /locus_tag="VSAL_I0739" FT CDS complement(826619..827254) FT /transl_table=11 FT /locus_tag="VSAL_I0740" FT /old_locus_tag="TVS0584" FT /product="putative DNA-binding protein" FT /db_xref="GOA:B6EGZ8" FT /db_xref="InterPro:IPR013559" FT /db_xref="UniProtKB/TrEMBL:B6EGZ8" FT /protein_id="CAQ78425.1" FT /translation="MLHKLSTADKLILKSTYSIVDGIAAMFGKHVEVVLHSLDSDNPSI FT IKIANGHVTGRGIGAPITNLALEKLKAGSDVSTPYFTRTDKGELLRSVTSMIRNEVGIP FT IALLCINSNLDVPMNSFFMDLFPQANQLAASPETFAKDSIEMLTDSIARIQSEVLEDES FT ITVSRRVRTIVERLHHQGAFNIKDATQITANILNVSKDSVYRYLRKFK" FT misc_feature complement(826631..826696) FT /locus_tag="VSAL_I0740" FT /note="Predicted helix-turn-helix motif with score FT 1056.000, SD 2.78 at aa 187-208, sequence FT DATQITANILNVSKDSVYRYLR" FT misc_feature complement(826883..827221) FT /locus_tag="VSAL_I0740" FT /note="HMMPfam hit to PF08348, YheO-like protein, score FT 9.9e-57" FT /inference="protein motif:HMMPfam:PF08348" FT CDS complement(827315..828592) FT /transl_table=11 FT /locus_tag="VSAL_I0741" FT /old_locus_tag="TVS0585" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR005130" FT /db_xref="InterPro:IPR021144" FT /db_xref="UniProtKB/Swiss-Prot:B6EGZ9" FT /protein_id="CAQ78426.1" FT /translation="MNSTWKQYITILKNVVKPALGCTEPICAAYATSVATQMLGEKAET FT IDVFVSDNLYKNSMGVFVPRTGRVGLAIAAAAGATGGNPEAGLEVLAKLTQSQVNEAQQ FT LIDAGRVQVKRETTDEFIYCRVVVKGSQHHAEVTISGGHTLIVEKRLDDNVIFSLDSSL FT PKASTASICDGVDITISSIYDFATHAEFDDIKFILKAKDLNIALAQEGLKNPYGLEVGR FT TYQKNIDTGLLSKSLDSDILIYTSAASDARMGGANLPAMSNYGSGNQGIAATIPVVKMA FT DFYNADEETLARAFIMSHLGAIYIKSHYPPLSAFCGNAVTSAAAAMAMVYLAGGSFEQS FT CSAIQNTISDTSGMICDGAKSTCAMKVGSSAQSAMKSSLLALNNHCVTKQGVIAEDVEK FT TIKNIGRMITTGMPNIDHEIIEIMAS" FT misc_feature complement(827318..828583) FT /locus_tag="VSAL_I0741" FT /note="HMMPfam hit to PF06354, Protein of unknown function FT (DUF1063), score 3.5e-214" FT /inference="protein motif:HMMPfam:PF06354" FT CDS complement(828610..828999) FT /transl_table=11 FT /locus_tag="VSAL_I0742" FT /old_locus_tag="TVS0586" FT /product="putative endoribonuclease L-PSP" FT /db_xref="InterPro:IPR006056" FT /db_xref="InterPro:IPR006175" FT /db_xref="InterPro:IPR013813" FT /db_xref="UniProtKB/TrEMBL:B6EH00" FT /protein_id="CAQ78427.1" FT /translation="MKQIIVAKSAPEAIGPYSHGTAFNGLIFTSGQLPVDSSTGSVVEG FT GITAQSEMSLKNLISVIEAADGDVNTVLKTTCYLANITDFSAFNEVYKTVFHTDCPARS FT CFAVKDLPLGVLVEVEAIAHKKTTV" FT misc_feature complement(828625..828981) FT /locus_tag="VSAL_I0742" FT /note="HMMPfam hit to PF01042, Endoribonuclease L-PSP,score FT 2.7e-46" FT /inference="protein motif:HMMPfam:PF01042" FT CDS join(829292..830356,831364..831603) FT /pseudo FT /transl_table=11 FT /gene="yhaO" FT /locus_tag="VSAL_I0743" FT /old_locus_tag="TVS0587" FT /product="inner membrane transport protein (pseudogene)" FT /note="Similar to Escherichia coli Inner membrane transport FT protein YhaO UniProt:P42628 (443 aa) fasta scores: FT E()=2e-81, 63.537% id in 458 aa. CDS is disrupted by the FT insertion of an IS element after codon 370" FT /db_xref="PSEUDO:CAQ78428.1" FT /inference="similar to sequence:UniProt:P42628" FT misc_feature 829310..829333 FT /gene="yhaO" FT /locus_tag="VSAL_I0743" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature order(829385..829453,829466..829534,829610..829678, FT 829721..829780,829799..829867,829934..830002, FT 830063..830131,830213..830281,831370..831420, FT 831430..831498,831535..831594) FT /gene="yhaO" FT /locus_tag="VSAL_I0743" FT misc_feature 830126..830191 FT /gene="yhaO" FT /locus_tag="VSAL_I0743" FT /note="Predicted helix-turn-helix motif with score FT 1048.000, SD 2.76 at aa 288-309, sequence FT ISQEQAAEAMNKNISALAIIAH" FT repeat_region complement(830359..831363) FT /note="VSa6" FT repeat_region complement(830359..830377) FT /note="IR of VSa6" FT CDS complement(830386..831267) FT /transl_table=11 FT /locus_tag="VSAL_I0744" FT /old_locus_tag="TVS0588" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ78429.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature complement(830446..830940) FT /locus_tag="VSAL_I0744" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(831345..831363) FT /note="IR of VSa6" FT CDS complement(831701..832543) FT /transl_table=11 FT /gene="yeiG" FT /locus_tag="VSAL_I0745" FT /old_locus_tag="TVS0590" FT /product="putative esterase" FT /EC_number="3.1.-.-" FT /db_xref="GOA:B6EH03" FT /db_xref="InterPro:IPR000801" FT /db_xref="InterPro:IPR014186" FT /db_xref="UniProtKB/TrEMBL:B6EH03" FT /protein_id="CAQ78430.1" FT /translation="MTVENISQAKVAGGWHKQYTHTSSTLNCDMRFAIFLPANASESNP FT VPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAMDTSPRGEDVDDDAEGAYDFGLG FT AGFYLNATQAPWNRHYHMYDYVTKELPSLIEEHFPVSDKKSISGHSMGGHGAITIGLKN FT QDAYQSISAFSPISSPINCPWGQKALGLYLGDNKETWKEYDSSELLKKGSKLPILVDQG FT EADGFLEEQLKPEYLLSSAEQSGTNIEVRMQPGYDHSYFFMSTFIDEHLEFHATYLNK" FT misc_feature complement(831725..832501) FT /gene="yeiG" FT /locus_tag="VSAL_I0745" FT /note="HMMPfam hit to PF00756, Putative esterase, score FT 5.7e-82" FT /inference="protein motif:HMMPfam:PF00756" FT CDS complement(832820..833968) FT /transl_table=11 FT /gene="adhC" FT /locus_tag="VSAL_I0746" FT /old_locus_tag="TVS0591" FT /product="alcohol dehydrogenase class 3" FT /EC_number="1.1.1.1" FT /note="Expression may be stress-induced" FT /db_xref="GOA:B6EH04" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR002328" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR014183" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EH04" FT /protein_id="CAQ78431.1" FT /translation="MALDIKPGQTSIKSKAMVAWAAGEPLKMEEVDVQLPKAGEVLVRI FT VATGVCHTDLFTLSGDDPEGIFPSILGHEGGGIVEMIGEGVTSVEVGDHVIPLYTAECG FT ECKFCKSGKTNLCQAVRETQGQGLMPDGTSRFSINGETIFHYMGCSTFSEFTVLPEISL FT AKVSKEAPLEEVCLLGCGVTTGMGAVLNTAKVEKGDTVAVFGLGGIGLSAIIGAKMAGA FT SRIIGVDLNESKYELAKKLGATDCINPTKFDKPIQEVIVEMTDGGVDYSFECIGNVHVM FT RAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVDR FT YMQGEFALDDFITHTMGLADVNAAFDLMHEGKSIRTVLHMDK" FT misc_feature complement(832952..833380) FT /gene="adhC" FT /locus_tag="VSAL_I0746" FT /note="HMMPfam hit to PF00107, Zinc-binding FT dehydrogenase,score 2.6e-40" FT /inference="protein motif:HMMPfam:PF00107" FT misc_feature complement(833471..833857) FT /gene="adhC" FT /locus_tag="VSAL_I0746" FT /note="HMMPfam hit to PF08240, Alcohol dehydrogenase FT GroES-like domain, score 4.5e-37" FT /inference="protein motif:HMMPfam:PF08240" FT misc_feature complement(833711..833755) FT /gene="adhC" FT /locus_tag="VSAL_I0746" FT /note="PS00059 Zinc-containing alcohol dehydrogenases FT signature." FT /inference="protein motif:ProSite:PS00059" FT CDS 834157..835029 FT /transl_table=11 FT /locus_tag="VSAL_I0747" FT /old_locus_tag="TVS0592" FT /product="HTH-type transcriptional regulator, LysR-family" FT /note="Similar to Alcaligenes eutrophus LysR-type FT Transcriptional Regulator CbnR (PDB 1IXC). FT Evalue=1e-06,identity=(26, 65)" FT /db_xref="GOA:B6EH05" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EH05" FT /protein_id="CAQ78432.1" FT /translation="MINWEGVTEFVAVAEAQSFTGAAKALDTSVAQISRKVAALEERLS FT IKLLIRTTRKVSVTEAGQTYYQHCRHLVEGLKQADRAITELNATPQGRLKITSSVTYGE FT QLIAPLLSDFMLMYPQLELELVLSNQTFDLVEQDFDLAIRLGRLSDSTMMAKRLSSRQV FT RVCASPAYIEKYGEPHTLSELSQHNCLVGSLPIWRFIENKKEKSVRVKGSVHCNSGAAL FT TNAALKGLGIVQLPDFYVQESMDKGELVEILVPYREPKEGIWAVYPNNRHLSTKVRLLV FT EFLAKELAE" FT misc_feature 834178..834345 FT /locus_tag="VSAL_I0747" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 5.7e-15" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature 834205..834270 FT /locus_tag="VSAL_I0747" FT /note="Predicted helix-turn-helix motif with score FT 1285.000, SD 3.56 at aa 17-38, sequence FT QSFTGAAKALDTSVAQISRKVA" FT misc_feature 834415..835023 FT /locus_tag="VSAL_I0747" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 1.4e-46" FT /inference="protein motif:HMMPfam:PF03466" FT CDS 835031..835564 FT /transl_table=11 FT /gene="tadA" FT /locus_tag="VSAL_I0748" FT /old_locus_tag="TVS0593" FT /product="tRNA-specific adenosine deaminase" FT /EC_number="3.5.4.-" FT /db_xref="GOA:B6EH06" FT /db_xref="InterPro:IPR002125" FT /db_xref="InterPro:IPR016192" FT /db_xref="InterPro:IPR016193" FT /db_xref="UniProtKB/TrEMBL:B6EH06" FT /protein_id="CAQ78433.1" FT /translation="MTDLDENKSATFYMQRAIELASIAEGEGEVPVGAVIVLNGEIIGE FT GWNRSIGTHDATAHAEMMAIKQAGQTVENYRLVNATLYVTLEPCPMCAGAIVQSRIKQV FT FFGAADLKTGASGSVINLFTAATAFHFVECESGLMADECREQLQAFFKRRRKEKKEEKQ FT LQREVEKKDELESK" FT misc_feature 835049..835354 FT /gene="tadA" FT /locus_tag="VSAL_I0748" FT /note="HMMPfam hit to PF00383, Cytidine and deoxycytidylate FT deaminas, score 1.6e-41" FT /inference="protein motif:HMMPfam:PF00383" FT misc_feature 835205..835318 FT /gene="tadA" FT /locus_tag="VSAL_I0748" FT /note="PS00903 Cytidine and deoxycytidylate deaminases FT zinc-binding region signature." FT /inference="protein motif:ProSite:PS00903" FT CDS complement(835973..837457) FT /transl_table=11 FT /locus_tag="VSAL_I0749" FT /old_locus_tag="TVS0594" FT /product="membrane-bound transglycosylase" FT /db_xref="GOA:B6EH07" FT /db_xref="InterPro:IPR000189" FT /db_xref="InterPro:IPR001638" FT /db_xref="InterPro:IPR008258" FT /db_xref="InterPro:IPR023346" FT /db_xref="InterPro:IPR023703" FT /db_xref="UniProtKB/TrEMBL:B6EH07" FT /protein_id="CAQ78434.1" FT /translation="MSHIRYYRLLKSCLVISTLVFTLTGCQVESEPKTKLEQVRERGIL FT RVSTLNNQLSYYIGSNGPTGLDYDLAKAFAEKLNVKLEITPAYTYSGLFPALNRNELDI FT VAANMTITPERLENFRTGPIYYYVSQQVVYKKGNWRPRNIKNLTELDENLTIVKDSSFE FT GTLLKLKEKYKKLEWSTEDNTDVSELLKQVARGEIHYTLADSVELSLTQRIHPDLAVAF FT ELTEDQPIAWFLQKTEDDSLQALLIEFFGELKSSGKLALLEEKYFGHVETFDYVDTRAF FT IRSLESKLPKWEPLFKKYAGDFDWRFLAALSYQESHWNPVAKSPTGVRGMMMLTLPTAQ FT SVGVKNRLDPEESIRGGAEYLRRIVKRVPDSITEHEKIWFALASYNIGFGHMMDARRLT FT QRLGGDPNSWTDVKDNLPLLRQKRYYKYLRYGFARGDEAQNYVENIRRYYQSIIGYEQE FT QANKLIQEDITVEDLTVIDVPLSSATSTTSHAVSSQ" FT misc_feature complement(836234..836578) FT /locus_tag="VSAL_I0749" FT /note="HMMPfam hit to PF01464, Transglycosylase SLT domain, FT score 2.9e-32" FT /inference="protein motif:HMMPfam:PF01464" FT misc_feature complement(836441..836527) FT /locus_tag="VSAL_I0749" FT /note="PS00922 Prokaryotic transglycosylases signature." FT /inference="protein motif:ProSite:PS00922" FT misc_feature complement(836651..837325) FT /locus_tag="VSAL_I0749" FT /note="HMMPfam hit to PF00497, Bacterial extracellular FT solute-binding prot, score 1.1e-26" FT /inference="protein motif:HMMPfam:PF00497" FT sig_peptide complement(837368..837457) FT /locus_tag="VSAL_I0749" FT misc_feature complement(837380..837412) FT /locus_tag="VSAL_I0749" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 837821..841750 FT /transl_table=11 FT /gene="purL" FT /locus_tag="VSAL_I0750" FT /old_locus_tag="TVS0595" FT /product="phosphoribosylformylglycinamidine synthase" FT /EC_number="6.3.5.3" FT /db_xref="GOA:B6EH08" FT /db_xref="InterPro:IPR000728" FT /db_xref="InterPro:IPR010073" FT /db_xref="InterPro:IPR010918" FT /db_xref="InterPro:IPR016188" FT /db_xref="InterPro:IPR017926" FT /db_xref="InterPro:IPR022940" FT /db_xref="UniProtKB/TrEMBL:B6EH08" FT /protein_id="CAQ78435.1" FT /translation="MRILRGSPALSVFRVNKLLELCRELSLPVTGIYAEFAHFADVKAD FT LDASEVEKLEKLLTYGPTIEEHEPEGLLLLSAPRPGTISPWSSKSTDIAHNCGLSNIAR FT LERGTAYYVETSETLSELQLVELKAILHDRMMEVVFTDFESAAALFTVAEPIPYAEVDL FT LVGGRKALENANVTLGLALAEDEIDYLLESFTEKLGRNPTDIELMMFAQANSEHCRHKI FT FNADWTIDGVKQDKTLFKMIKNTFEVTPEHVLSAYKDNAAVMTGSTVGRFFPDPETRQY FT NYHQEKTHILMKVETHNHPTAISPWPGASTGSGGEIRDEGATGIGGKPKAGLVGFSVSN FT LKIPNFVQPWETDFGKPSRIVTALDIMLEGPLGGAAFNNEFGRPNLLGYFRTYEEKVNS FT HNGEEVRGYHKPIMLAGGLGNIRDDHVQKKEIPVGASLIVLGGPAMNIGLGGGAASSMA FT SGQSAEDLDFASVQRENPEMERRCQEVIDRCWQLGDANPIAFIHDVGAGGISNALPELV FT DDGERGGIFNLRDVPNDEPGMSPLEIWCNESQERYVMAVADKDLATFEAICKRERAPYA FT VVGKATEERDLKLEDSHFDNTPIDMPMDILLGKTPKMHRDAKTLKANNSALDCSGIELN FT EAIERVLRLPTVAEKTFLITIGDRSVTGLVARDQMVGPWQVPVANCAVTAASYDTYHGE FT AMSLGERTPVALLDFGASARLAVGEAITNIAATNVGDIKHIKLSANWMSPAGHPGEDAG FT LYEAVKAVGEELCPALGLTIPVGKDSMSMKTKWEENGEQKEVTSPLSLVITAFARIEDV FT RKTVTPQLRTDKGETSLVLIDLGNGKNRMGATALAQVYKQLGDKPADVDNAVQLKGFYE FT GIQTLVANDQLVAYHDKGDGGLFVTLAEMAFAGHCGVNANIEALLLESESNENTLAVLF FT NEELGAVIQVRNEDLDSVLSTLAANELGECSHVIGSVADSDELVIKSGETVVVERNRTE FT LRTIWAETTHKMQGLRDNPECADQEHEAKKDNSDPGLNVSLSFDVNEDIAAPIIEAAMI FT NKGAKPKMAILREQGVNSHVEMAAAFDRAGFEATDIHMSDILTGSAVLEEYNGLVACGG FT FSYGDVLGAGEGWAKSVLFNEKTRNQFEDFFKREDTFSLGVCNGCQMLSNLRELIPGAE FT YWPRFVRNESERFEARFSLVEVQKSDSVFFNGMEGSRMPIAVSHGEGRVEVRDNDHLNA FT IENSGTVALRYVDNNGNQTQQYPNNPNGSPNAITGLTTTDGRVTIMMPHPERVFRTVAN FT SWAPESWGENGAWMRMFQNARKNIG" FT misc_feature 838535..839086 FT /gene="purL" FT /locus_tag="VSAL_I0750" FT /note="HMMPfam hit to PF00586, AIR synthase related FT protein, N-terminal dom, score 5.4e-35" FT /inference="protein motif:HMMPfam:PF00586" FT misc_feature 839114..839596 FT /gene="purL" FT /locus_tag="VSAL_I0750" FT /note="HMMPfam hit to PF02769, AIR synthase related FT protein, C-terminal dom, score 5.1e-37" FT /inference="protein motif:HMMPfam:PF02769" FT misc_feature 840290..840748 FT /gene="purL" FT /locus_tag="VSAL_I0750" FT /note="HMMPfam hit to PF02769, AIR synthase related FT protein, C-terminal dom, score 4.6e-19" FT /inference="protein motif:HMMPfam:PF02769" FT CDS 841969..842460 FT /transl_table=11 FT /locus_tag="VSAL_I0751" FT /old_locus_tag="TVS0597" FT /product="hypothetical protein" FT /note="Possible alternative translational start site after FT codon 7" FT /db_xref="InterPro:IPR003731" FT /db_xref="UniProtKB/TrEMBL:B6EH09" FT /protein_id="CAQ78436.1" FT /translation="MLLNEVFMIYAIPSHRDKIAPHFSKAEQFLILDDRKGRSISIDNP FT AKVITGCKGKKALLDMLIMNGVEAVVVRNIGERLLTKLLSRNVDIYQATRMSQLSSIHP FT SGLEKIMDCSAAKQSINHLNKVGCSEGRKTERTQAKILAPRLIGVVAKMLNFRKGEEGL FT " FT CDS 842457..842660 FT /transl_table=11 FT /locus_tag="VSAL_I0752" FT /old_locus_tag="TVS0598" FT /product="putative exported protein" FT /db_xref="InterPro:IPR007495" FT /db_xref="UniProtKB/TrEMBL:B6EH10" FT /protein_id="CAQ78437.1" FT /translation="MMTFMVTFCVFLAVILMMAIGVIFHRQSIKGSCGGLSILKVKRVC FT NCKTTCIEEAKQSLYQIQEPQR" FT sig_peptide 842457..842534 FT /locus_tag="VSAL_I0752" FT misc_feature 842466..842525 FT /locus_tag="VSAL_I0752" FT misc_feature 842520..842657 FT /locus_tag="VSAL_I0752" FT /note="HMMPfam hit to PF04400, Protein of unknown function FT (DUF539), score 2e-11" FT /inference="protein motif:HMMPfam:PF04400" FT CDS complement(842678..842953) FT /transl_table=11 FT /locus_tag="VSAL_I0753" FT /old_locus_tag="TVS0599" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR002852" FT /db_xref="UniProtKB/TrEMBL:B6EH11" FT /protein_id="CAQ78438.1" FT /translation="MARPIIERNIRCRPAHSCFKPNGIPMTELEQVSLLPDEFEAIRLS FT DLNGLNQQACADQMGISRQTFGNTIKRARAKTAQSIIEGKALMLSK" FT misc_feature complement(842681..842953) FT /locus_tag="VSAL_I0753" FT /note="HMMPfam hit to PF02001, Protein of unknown function FT DUF134, score 2.8e-13" FT /inference="protein motif:HMMPfam:PF02001" FT misc_feature complement(842723..842878) FT /locus_tag="VSAL_I0753" FT /note="HMMPfam hit to PF08281, Sigma-70, region, score FT 0.0025" FT /inference="protein motif:HMMPfam:PF08281" FT misc_feature complement(842741..842806) FT /locus_tag="VSAL_I0753" FT /note="Predicted helix-turn-helix motif with score FT 1739.000, SD 5.11 at aa 50-71, sequence FT LNQQACADQMGISRQTFGNTIK" FT CDS 843130..843645 FT /transl_table=11 FT /locus_tag="VSAL_I0754" FT /old_locus_tag="TVS0600" FT /product="rRNA methylase (SpoU_methylase)" FT /db_xref="GOA:B6EH12" FT /db_xref="InterPro:IPR001537" FT /db_xref="UniProtKB/TrEMBL:B6EH12" FT /protein_id="CAQ78439.1" FT /translation="MKNTHVTIGLSNPKSPTNVGAVMRAAGCYQVDDVRYTGERYDRAT FT KFQTDTKKAVNKIPLTSVECLLDNLADDMKIVCVELAEGAVSLPEFKHPDKAIYVFGPE FT DGSITQQVADRADHVVYIPTVGCMNLAATVNVLLYDRLAKSVDIVKGDELIRSSRDNRN FT HLVIKEKE" FT misc_feature 843142..843546 FT /locus_tag="VSAL_I0754" FT /note="HMMPfam hit to PF00588, SpoU rRNA Methylase FT family,score 5.1e-20" FT /inference="protein motif:HMMPfam:PF00588" FT CDS 843716..844252 FT /transl_table=11 FT /locus_tag="VSAL_I0755" FT /old_locus_tag="TVS0601" FT /product="membrane protein" FT /db_xref="InterPro:IPR021768" FT /db_xref="UniProtKB/TrEMBL:B6EH13" FT /protein_id="CAQ78440.1" FT /translation="MKKSIIKVIAISAVALTLSGCVGSNAVTGMLMKFNVQVVDNRYAR FT AGVNFLLAPVYALTLASDYIVFNSLEFWTGKNVLTGTPHIFDSKVDTMMKINDSLDDSL FT KTAPIPLSSNRAIEFGQMKQIDENTIQMDITYNNGEKAVLLGVRDGNYITYYMDGQIVS FT ETSIEALEELAASRS" FT sig_peptide 843716..843793 FT /locus_tag="VSAL_I0755" FT misc_feature order(843740..843808,843851..843919) FT /locus_tag="VSAL_I0755" FT CDS 844660..844986 FT /transl_table=11 FT /locus_tag="VSAL_I0756" FT /old_locus_tag="TVS0602" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR022069" FT /db_xref="UniProtKB/TrEMBL:B6EH14" FT /protein_id="CAQ78441.1" FT /translation="MAKFDYRIVEKRNAWAAEITRQVTSRRTVVSKRQLGFESEAEAVE FT WAQKELVEFAKTQAVRNDRKADQRSEKEEMIARKKEKSAAQKAEYEAARDAKEDESEYD FT YDEE" FT CDS complement(845055..847595) FT /transl_table=11 FT /gene="chiA" FT /locus_tag="VSAL_I0757" FT /old_locus_tag="TVS0603" FT /product="endochitinase ChiA" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EH15" FT /db_xref="InterPro:IPR001223" FT /db_xref="InterPro:IPR001579" FT /db_xref="InterPro:IPR003610" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:B6EH15" FT /protein_id="CAQ78442.1" FT /translation="MKRIFINSAIASALFISYGANAFDCSSLPLWQNSEPYSGGAEIQQ FT NQIAYQAQWWSQGNSPETHSGEWQKWKRLGQCDNSGGNTAPTLSIISPLNNAAIAEGSA FT ITLQANAVDSDGEITRVEFLADSQSITIITAPPYNTDWVALKNTTSISVIATDNEGSST FT TESVSIRVQSTGDLIPPSIQLLSPTGNEVLSVGDDLLMSADAIDNDGQIAYVEFYVDSE FT LVFTDSSAPFEHLWTATKGTHRFKAKAIDNDEQSSISQESILTITEPSSGGCAGLPQYK FT SGTAYTQGDEIQNINQKYRCDVGGWCSSSSDWAYAPGTGSSWQDAWTGLGVCSTPPEVA FT ITSPSDNSVILAGSSIIINATASDSDGSIVGVEFFANDMTLGADTQAPYSMTWTAALIG FT NNTLKAVATDNEGNNSDNSILVTVSDQNVVTSLTSPASGSSLALGKVTQLSATATSLTS FT SITQVDFLINGAIVGSDTTTPYNTNWTPSAIGSYSISTEATDAQGNKALSIASSIAVLE FT QSQATHKLIGYWHNFVNGSGCPIRLSEMPDEWDVIDIAFADNDRNSNGTVHFNLYSGDI FT HSSCLALDPNQFKQDMAALQAKGKIFVLSLGGAEGTITLNTEQDEANFVSSLTALIDEW FT GFDGLDIDLESGSNLLHGTQIQARLPTALKQIEMNMGGDMYLTMAPEHPYVQGGMVAYS FT GIWGAYIPVIDQVRDTLDLLHVQLYNNGGLANPYMPGAAPEGSVDMMVASVKMLVEGFE FT LADGSFFAPLRDDQVAIGLPSGPSSANSGQAPTQNIIDALDCVTYGSACSTVVPNKLYP FT NFGGVMTWSINWDKHDGFNFSQPIGEKLTLMNAQ" FT misc_feature complement(845121..846029) FT /gene="chiA" FT /locus_tag="VSAL_I0757" FT /note="HMMPfam hit to PF00704, Glycosyl hydrolases FT family,score 1.4e-23" FT /inference="protein motif:HMMPfam:PF00704" FT misc_feature complement(845661..845687) FT /gene="chiA" FT /locus_tag="VSAL_I0757" FT /note="PS01095 Chitinases family 18 active site." FT /inference="protein motif:ProSite:PS01095" FT misc_feature complement(846678..846767) FT /gene="chiA" FT /locus_tag="VSAL_I0757" FT /note="HMMPfam hit to PF02839, Carbohydrate binding domain, FT score 0.0065" FT /inference="protein motif:HMMPfam:PF02839" FT misc_feature complement(847383..847514) FT /gene="chiA" FT /locus_tag="VSAL_I0757" FT /note="HMMPfam hit to PF02839, Carbohydrate binding domain, FT score 1.6e-06" FT /inference="protein motif:HMMPfam:PF02839" FT sig_peptide complement(847530..847595) FT /gene="chiA" FT /locus_tag="VSAL_I0757" FT CDS 847796..848317 FT /transl_table=11 FT /locus_tag="VSAL_I0758" FT /old_locus_tag="TVS0604" FT /product="hypothetical protein" FT /db_xref="GOA:B6EH16" FT /db_xref="InterPro:IPR001437" FT /db_xref="UniProtKB/TrEMBL:B6EH16" FT /protein_id="CAQ78443.1" FT /translation="MISGRFYGLSNMIEKEALLDSIIQQLRQVHQMALEATQRAIEQAT FT DKEAIARSKYETFGLEASYLAHGQARRVSECDADILAYRKLPRLEYGEDSVINQCALVT FT LVNQDDIESQFFIGPSAGGGVKVTHEDMTFLLITPSAPLGKAMIGKQLGDEFELDLSGR FT KQQYEIIGVQ" FT CDS complement(848387..849481) FT /transl_table=11 FT /locus_tag="VSAL_I0759" FT /old_locus_tag="TVS0605" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EH17" FT /db_xref="InterPro:IPR007036" FT /db_xref="UniProtKB/TrEMBL:B6EH17" FT /protein_id="CAQ78444.1" FT /translation="MQRQKGLKLVAKARQNKAFDILTYSVAPGERKVIEIEAAKLYTHS FT PLSIPVEIINGQHAGPILMVNAAIHGDELNGVEIVRQLINNIDPKTLKGTLIAVPIVNV FT FGFIHKSRYLPDRRDLNRCFPGSEKGSLASRMANTFFTQIAKRCDYIVDLHTGAIHRTN FT LPQIRANLSNPETLRIAKAFATPLIVDSPLRDGSLRSEAERCGIPVLTYEAGEALRFEP FT IAINAGYVGVQRVMQSIGMLKASRKRLPTAIIAKSTGWLRAESDGILRTIVTLGEQVEK FT DQVLAYISAPLGHGEIEIIAHKGGIVIGQQTLPLVNEGDAIFNLAYFSEDDEMVGQTVE FT TYIDEMIDADTDQLTNGQITTSTL" FT misc_feature complement(848498..849307) FT /locus_tag="VSAL_I0759" FT /note="HMMPfam hit to PF04952, Succinylglutamate FT desuccinylase / Aspartoac, score 9.8e-87" FT /inference="protein motif:HMMPfam:PF04952" FT CDS complement(849441..850346) FT /transl_table=11 FT /gene="rimK" FT /locus_tag="VSAL_I0760" FT /old_locus_tag="TVS0606" FT /product="ribosomal protein S6 modification protein" FT /db_xref="GOA:B6EH18" FT /db_xref="InterPro:IPR004666" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013651" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR023533" FT /db_xref="UniProtKB/Swiss-Prot:B6EH18" FT /protein_id="CAQ78445.1" FT /translation="MKIGILSRNQDLYSTRRLIEAAESRGHEVKVIDALRCYMNINSEK FT PQIHFKGEELINYDAIIPRIGASVTFYGTAVLRQFEMMNVYPVNESVAITRSRDKLRSM FT QLLSRKGIGMPITGFASKPDDVKDLLDMVGGGPVVIKLLEGTQGIGVVLAETRKAAESV FT VEAFMGLKANIMVQEFIKEAGGADIRCFVIGGKVIAAMKRQGAEGEFRSNLHRGGSASL FT VKLTPEERKTAVAAANIMGLNVAGVDLLRSDRGPLVMEVNSSPGLEGIEAATGKDVAGL FT IVDFIEKNAATKGTKTRGKG" FT misc_feature complement(849489..850058) FT /gene="rimK" FT /locus_tag="VSAL_I0760" FT /note="HMMPfam hit to PF08443, RimK-like ATP-grasp FT domain,score 9.3e-90" FT /inference="protein motif:HMMPfam:PF08443" FT misc_feature complement(849516..850052) FT /gene="rimK" FT /locus_tag="VSAL_I0760" FT /note="HMMPfam hit to PF02955, Prokaryotic glutathione FT synthetase, ATP-g, score 1.1e-10" FT /inference="protein motif:HMMPfam:PF02955" FT misc_feature complement(849555..850058) FT /gene="rimK" FT /locus_tag="VSAL_I0760" FT /note="HMMPfam hit to PF02655, ATP-grasp domain, score FT 0.00014" FT /inference="protein motif:HMMPfam:PF02655" FT CDS complement(850346..850786) FT /transl_table=11 FT /locus_tag="VSAL_I0761" FT /old_locus_tag="TVS0607" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EH19" FT /db_xref="InterPro:IPR008503" FT /db_xref="InterPro:IPR009007" FT /db_xref="UniProtKB/TrEMBL:B6EH19" FT /protein_id="CAQ78446.1" FT /translation="MTNKIMVGWRESLSLPELGIKLIKAKVDTGAQTSCLHAFKVEPFT FT KDGEAWVRFWIHPEKRNNDFVQICEAPIVDKRVVKSSSGQEEMRYVIRTMIRLAGQEWP FT AEITLSNRETMVFRMLLGRSSMQDRIVVDPSSSYLVDFEEIV" FT misc_feature complement(850358..850771) FT /locus_tag="VSAL_I0761" FT /note="HMMPfam hit to PF05618, Protein of unknown function FT (DUF785), score 1.9e-55" FT /inference="protein motif:HMMPfam:PF05618" FT CDS 851281..852645 FT /transl_table=11 FT /locus_tag="VSAL_I0762" FT /old_locus_tag="TVS0608" FT /product="sodium-dependent transporter" FT /db_xref="GOA:B6EH20" FT /db_xref="InterPro:IPR000175" FT /db_xref="UniProtKB/TrEMBL:B6EH20" FT /protein_id="CAQ78447.1" FT /translation="MTTGNRESFSSRLGFILSAAGAAVGLGNIWGFPTQAASNGGGAFL FT LVYLIMILVVAFPMLVVEMAIGRHGQANPVDSMRALTSNPMGKRFGAFVGWIGLSVPSV FT VLMFYSIVGGWLICFLFGAMANVVGLHDLAEWFKGFSIERNLLGTILFYVLTILIVQGG FT IKDGIEKWSTRLMPALFVLFGLLFVYIMMQQGAVEGLKHYLIPDFEKVMDKKLILAAMG FT QGFFSLTIGGCSMLIYGSYLSKTENLPKMAMNVTLVDTAVAFVAGLVVMPAMFVAMQKG FT VQIYAEDGSLLSSDTLVFTVLPMMFDSLGLLGDLFAIAFFLLLTIAALTSSISMLECSV FT SLVSERFETRRTPTSWVLGLLIAVFSVVIVFNFSELFGLVAMIATQYLQPVAALLFCVF FT GGWVWSRHSKIKELEQGYPEFQQGFFGKVWPLYVKFVCPVLVIAVLWASFLFAYK" FT sig_peptide 851281..851394 FT /locus_tag="VSAL_I0762" FT misc_feature 851296..852537 FT /locus_tag="VSAL_I0762" FT /note="HMMPfam hit to PF00209, Sodium:neurotransmitter FT symporter family, score 1.2e-10" FT /inference="protein motif:HMMPfam:PF00209" FT misc_feature order(851317..851370,851398..851466,851554..851655, FT 851698..851766,851803..851871,851938..852006, FT 852043..852111,852184..852252,852343..852411, FT 852424..852492,852571..852639) FT /locus_tag="VSAL_I0762" FT CDS complement(852737..853345) FT /pseudo FT /transl_table=11 FT /gene="chiA" FT /locus_tag="VSAL_I0763" FT /old_locus_tag="TVS0610" FT /product="chitinase A (fragment)" FT /note="Similar to Vibrio harveyi chitinase A ChiA FT UniProt:P96168 (729 aa) fasta scores: E()=1.1e-29, 40.099% FT id in 202 aa. CDS is truncated by the insertion of the FT upstream IS element and subsequent recombination events" FT /inference="similar to sequence:UniProt:P96168" FT misc_feature complement(852803..852904) FT /gene="chiA" FT /locus_tag="VSAL_I0763" FT /note="HMMPfam hit to PF02839, Carbohydrate binding domain, FT score 0.0088" FT /inference="protein motif:HMMPfam:PF02839" FT misc_feature complement(853268..853345) FT /gene="chiA" FT /locus_tag="VSAL_I0763" FT /note="HMMPfam hit to PF02839, Carbohydrate binding domain, FT score 0.00096" FT /inference="protein motif:HMMPfam:PF02839" FT repeat_region complement(853348..855660) FT /note="VSa2" FT repeat_region complement(853348..853371) FT /note="IR of VSa2" FT CDS complement(join(853364..853597,853597..853653, FT 853653..854849)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0764" FT /old_locus_tag="TVS0612" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=2.1e-119, 56.795% id in 493 aa. CDS FT contains frameshifts after codon 399 adn 418" FT /db_xref="PSEUDO:CAQ78449.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT CDS complement(join(854921..855163,855167..855268)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0765" FT /old_locus_tag="TVSa0119" FT /product="transposase (pseudogene)" FT /note="Similar to Pseudoalteromonas haloplanktis (strain FT TAC 125) putative orphan protein putative transposase (is66 FT family element,orf2-like). UniProt:Q3IIG1 (EMBL:CR954246) FT (115 aa) fasta scores: E()=6.3e-31,58.261% id in 115 aa. FT CDS contains a translational stopcodon after codon 34" FT /db_xref="PSEUDO:CAQ78450.1" FT /inference="similar to sequence:UniProt:Q3IIG1" FT CDS complement(855265..855579) FT /transl_table=11 FT /locus_tag="VSAL_I0766" FT /old_locus_tag="TVS0614" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78451.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT repeat_region complement(855637..855660) FT /note="IR of VSa2" FT CDS complement(855663..855806) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0767" FT /old_locus_tag="TVS0615" FT /product="hypothetical protein, putative phage gene FT (fragment)" FT /note="Weakly similar to Bacteriophage Mu Protein gp38 FT UniProt:P79677 (67 aa) fasta scores: E()=0.0037, 47.826% id FT in 46 aa. CDS is truncated by the insertion of the FT downstream IS element and subsequent recombination events" FT /inference="similar to sequence:UniProt:P79677" FT CDS complement(855807..856337) FT /transl_table=11 FT /locus_tag="VSAL_I0768" FT /old_locus_tag="TVS0616" FT /product="hypothetical protein, putative phage gene" FT /db_xref="InterPro:IPR006522" FT /db_xref="UniProtKB/TrEMBL:B6EH24" FT /protein_id="CAQ78453.1" FT /translation="MRLTNPEHLTSMLENVALNPRQQFQLNQKLANHSRRFFRSQISHQ FT RDIDNTPYQSRTRRTKKQQADPKVVLNTKSNRNMLMGLSRSLRTNVTGEAFEVGLTGIP FT AKIGREHNEGQTLSFTTHVNGFYDSKTSRWKGGVKTKNNYRMPKRTFIGWTPSLERELM FT TMIRDELVINMEP" FT CDS complement(856328..856801) FT /transl_table=11 FT /locus_tag="VSAL_I0769" FT /old_locus_tag="TVS0617" FT /product="hypothetical protein, putative phage gene" FT /db_xref="InterPro:IPR009678" FT /db_xref="UniProtKB/TrEMBL:B6EH25" FT /protein_id="CAQ78454.1" FT /translation="MKALQSLTELFTQSVTDAKNVELWAEDGQIECAQGVSVDGFDIAY FT TVNINMSDVDVQPETLMMHLVLWLNQYDVDRSTKGLPAPSFATEILDNGRCDIKLKIDM FT KESYSVEESEHGVWQQGGIRFDCVSDFALAAIEEELPLLEFVGAHDRDLPECD" FT CDS complement(856805..857263) FT /transl_table=11 FT /locus_tag="VSAL_I0770" FT /old_locus_tag="TVS0618" FT /product="hypothetical protein, putative phage gene" FT /db_xref="GOA:B6EH26" FT /db_xref="InterPro:IPR009225" FT /db_xref="UniProtKB/TrEMBL:B6EH26" FT /protein_id="CAQ78455.1" FT /translation="MSRMAFVGNKDDAYLGELPATIHHPKLVVAEFQAVFHFLSNETEI FT GILHNLTLARITVNSELLDLMNTHGTLDNASEYWFGDTDTGNALYKQAVFSLAANYIVG FT NKLSMDATAEAAERQDALQQKADNCLVHYRRAVDLLLHGKETYTFEVV" FT CDS complement(857360..858394) FT /transl_table=11 FT /locus_tag="VSAL_I0771" FT /old_locus_tag="TVS0619" FT /product="phage major capsid protein" FT /db_xref="GOA:B6EH27" FT /db_xref="InterPro:IPR006441" FT /db_xref="UniProtKB/TrEMBL:B6EH27" FT /protein_id="CAQ78456.1" FT /translation="MQEATKVVLAAYAKAVAKKYGVSDVTEKFSVTPVQTQRIIAQIRE FT SNWFLGKINIISVSNQKGEALGLGVTGMIASRTDTSEGTTRKTKTVFNLKAMPYLCEQI FT NFDTHMRYNQLDAFAHMKNFAIIISMQTREQIDTNKITIGFYGKECAANTDPKANPNGE FT DVCKGWFQALREHNPAALLVQGKTENEIRIGEGGDFVNLDLAVMNVKGLLHDACENAPD FT LIAIIGSDLLAYEKAKFYVKHGNTPSEKAKIEEMQIIGTYGGLPAVSVPGFPPSGILVT FT SYKNLSIYIQEGSIRRAVAKRNDERDQIENFESMNMAYVIEQLEKAAAVEFDNVRLLID FT GEWV" FT misc_feature complement(857390..858379) FT /locus_tag="VSAL_I0771" FT /note="HMMPfam hit to PF05125, Phage major capsid FT protein,P2 family, score 8.2e-85" FT /inference="protein motif:HMMPfam:PF05125" FT misc_feature complement(857834..857857) FT /locus_tag="VSAL_I0771" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(858446..859318) FT /transl_table=11 FT /locus_tag="VSAL_I0772" FT /old_locus_tag="TVS0620" FT /product="probable capsid scaffolding protein" FT /note="Similar to Bacteriophage HP1 Probable capsid FT scaffolding protein UniProt:P51719 (298 aa) fasta scores: FT E()=1e-15, 32.740% id in 281 aa" FT /db_xref="GOA:B6EH28" FT /db_xref="InterPro:IPR009228" FT /db_xref="UniProtKB/TrEMBL:B6EH28" FT /inference="similar to sequence:UniProt:P51719" FT /protein_id="CAQ78457.1" FT /translation="MFQSEPICILTAGPTIDGRHIEQQVIDDIVEQYDPERYNARINEE FT HWYWGEKFGSVLSVEKRGNQLMAILKPNSKLLSTIEEGQLLHTSCEIQKNFADSGKYYL FT TGLALTDDPASLGTTEIHLSARRPEDKGKDLLSTGSTISKKMLTGNVLDEQEERSFITK FT LMSFMSSNRHQEQNNEEDNDMNEELKGLLTKNTEQNEAVATALNILATAVEKLSVGNVG FT ETSLTPTTPAPPADGSNAIAEGNTELSAKVDALSTQLSELTTKLSAMTDEKGRLLAGEG FT GDDDAERWL" FT CDS 859448..861244 FT /transl_table=11 FT /locus_tag="VSAL_I0773" FT /old_locus_tag="TVS0621" FT /product="putative bacteriophage terminase" FT /db_xref="GOA:B6EH29" FT /db_xref="InterPro:IPR004921" FT /db_xref="InterPro:IPR010332" FT /db_xref="UniProtKB/TrEMBL:B6EH29" FT /protein_id="CAQ78458.1" FT /translation="MLSLSKTQRNMKEKTKRSNDIPIYTQEQTLALGYYLRQYETKEIA FT EETNVNPRTVQQWIAKFGWKKMRDDSPVELMLRQRIAYLLWIDRKHAEQLAELEMLLEQ FT KYKRDRAAEYKKRKASHADGGDAPARGRPSNKVKNDVSGITAEMLSEYYETKYFQYQKD FT IHAHKGDERINEQRFYLKSRQIGLSDYFSFEAFEDAVLTGDNQVFISASRKQAEIFKNY FT IRKFALQIGGVELKGKDSITLSNGAEFHFMSTNVFTSQGFNGHMYYDEVFWMPNFQRLD FT DYAGGMSIQAQYRTTYLSTPSSTAHEAYPKWTGPKDKGIDISHKALKKGAMGVDGVFRQ FT MITVDDAIKGGATFFNMDKLRRKYPIKSIFDNVLRCVFLDDSASFFNIKALLACKTDTS FT KWKTIDMGKCRPAGDLEVLVGYDPRGGGQADGSDDAGLVISLKPLKKGGVFRFLERIRL FT KGSSYEEQAKAIEGITEKYHVVHLEMDTSGVGSAVAELVRKFYPSLKEVNYSPEVKRMM FT AYKAREIINAGRLQFDDSWDDVVHSFLMIRQHTTKASNQITMISTRTKRGSHADLAWAA FT MHVLHWEPIDILNDHSTTVSFS" FT misc_feature 859562..859627 FT /locus_tag="VSAL_I0773" FT /note="Predicted helix-turn-helix motif with score FT 1994.000, SD 5.98 at aa 39-60, sequence FT YETKEIAEETNVNPRTVQQWIA" FT misc_feature 859979..861196 FT /locus_tag="VSAL_I0773" FT /note="HMMPfam hit to PF03237, Terminase-like family,score FT 4.9e-81" FT /inference="protein motif:HMMPfam:PF03237" FT CDS join(861286..861855,861854..862234) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0774" FT /old_locus_tag="TVS0623" FT /product="putative portal vertex protein (pseudogene)" FT /note="Similar to Bacteriophage P2 Presumed portal vertex FT protein (GpQ) UniProt:P25480 (344 aa) fasta scores: FT E()=6.2e-09, 40.769% id in 130 aa. CDS contains a FT frameshift after codon 190. The sequence has been checked FT and is believed to be correct" FT /db_xref="PSEUDO:CAQ78459.1" FT /inference="similar to sequence:UniProt:P25480" FT misc_feature order(861295..861854,861855..862216) FT /locus_tag="VSAL_I0774" FT /note="HMMPfam hit to PF04860, Phage portal protein, score FT 1.2e-28" FT /inference="protein motif:HMMPfam:PF04860" FT CDS complement(862454..863467) FT /transl_table=11 FT /locus_tag="VSAL_I0775" FT /old_locus_tag="TVS0624" FT /product="putative exported protein, putative phage gene" FT /db_xref="InterPro:IPR003848" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:B6EH31" FT /protein_id="CAQ78460.1" FT /translation="MKKNLIALVLMAFTFNTYASVDSPLSKRIQNLNNIMISSHSVRAD FT IISGDFDAVFSLYDNIESEKINMQHFSPTIGTTDVVNKLADDQRNIIDYAYNTVKNNTG FT KIIPRRNNNYKPNGLIVLGSTPKLGILESRLNQAYTLAIKYPNMPIILSGKGRKNNVIE FT ADYMYDYLKDKGIETKRMYKESESLDTVGNAEFSYFTIQENPSLNKIKNWLVITNNYHA FT MRSLFNFSRIFPESYTISVLLAPLLPDGITNPDEDKILKNLIGKEIKSDSNEQFMELLR FT YNRYSINRHKFKSQNLTGKPCAILNEILLEHGLYKDNVDKFTNKFSQCYEGLDNNQ" FT misc_feature complement(862622..863125) FT /locus_tag="VSAL_I0775" FT /note="HMMPfam hit to PF02698, DUF218 domain, score FT 1.5e-14" FT /inference="protein motif:HMMPfam:PF02698" FT sig_peptide complement(863405..863467) FT /locus_tag="VSAL_I0775" FT CDS complement(863578..864039) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0776" FT /old_locus_tag="TVS0625" FT /product="hypothetical protein, putative phage gene FT (fragment)" FT /note="Similar to Vibrio fischeri Thioredoxin peroxidase FT UniProt:Q5E1J4 (177 aa) fasta scores: E()=5.7e-32, 60.544% FT id in 147 aa. The CDS appears to be truncated at the FT N-terminus. The sequence has been checked and is believed FT to be correct" FT /db_xref="PSEUDO:CAQ78461.1" FT /inference="similar to sequence:UniProt:Q5E1J4" FT misc_feature complement(863644..864039) FT /locus_tag="VSAL_I0776" FT /note="HMMPfam hit to PF08534, Redoxin, score 0.00085" FT /inference="protein motif:HMMPfam:PF08534" FT CDS complement(864223..864978) FT /transl_table=11 FT /locus_tag="VSAL_I0777" FT /old_locus_tag="TVS0626" FT /product="N-acetylmuramoyl-L-alanine amidase" FT /db_xref="GOA:B6EH33" FT /db_xref="InterPro:IPR002477" FT /db_xref="InterPro:IPR002502" FT /db_xref="UniProtKB/TrEMBL:B6EH33" FT /protein_id="CAQ78462.1" FT /translation="MCHIDYNSYRSVSSYNRRVRFLVMHYTAINFSASINALTGKEATV FT SAHYLVPNPLDITYQNAGFGDMRIFNLVDENERAWHAGVSSWAGRNGLNDSSIGIEIVN FT EASDDKGVFTFPPYSPTQIQALISLSKNILQRYPDLSPTNVVGHSDIAVGRKVDPGPAF FT PWKALYDEGVGAWYDEDKKQKYTTKLSTGLPDKKDILAAFKKYGYAVDGEYSLLVRAFQ FT LHFRPRRTTGVADLETLSILFALVEKYFK" FT misc_feature complement(864451..864957) FT /locus_tag="VSAL_I0777" FT /note="HMMPfam hit to PF01510, N-acetylmuramoyl-L-alanine FT amidase, score 1.2e-43" FT /inference="protein motif:HMMPfam:PF01510" FT misc_feature complement(864526..864564) FT /locus_tag="VSAL_I0777" FT /note="PS00018 EF-hand calcium-binding domain." FT /inference="protein motif:ProSite:PS00018" FT CDS complement(865267..865629) FT /transl_table=11 FT /locus_tag="VSAL_I0778" FT /old_locus_tag="TVS0627" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EH34" FT /protein_id="CAQ78463.1" FT /translation="MLITIVALVTLLVGVYREGYNNGFSMTMNKIQTQHLEQINIAIKK FT ANTTINNDKRVIREFMTKQTDFIKRVETNTGSVLLTQPHHNKEEEHEQQSSEYVVGIDA FT DELRELQRLTHLANTH" FT CDS complement(865634..865804) FT /transl_table=11 FT /locus_tag="VSAL_I0779" FT /old_locus_tag="TVS0628" FT /product="putative membrane protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EH35" FT /protein_id="CAQ78464.1" FT /translation="MSLFVGYMWVEFNTYFFSIPINQHSEFALVQYAAITGVFIGFCKF FT YMDTGKRLNAD" FT misc_feature complement(order(865667..865720,865748..865816)) FT /locus_tag="VSAL_I0779" FT CDS complement(865839..866237) FT /transl_table=11 FT /locus_tag="VSAL_I0780" FT /old_locus_tag="TVS0629" FT /product="putative membrane protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EH36" FT /protein_id="CAQ78465.1" FT /translation="MNKFSKKSASRLATCHPDLITVFTRVLEICDCSILCGHRTKEEQN FT ALPSTNTQVRYPNSKHNSLPSEAVDATPYPYDEDDRERFSYFAGIVMGVGASMGIAIRW FT GGDWDRDFDLKDNTFDDLMHFELASNDA" FT misc_feature complement(865920..865988) FT /locus_tag="VSAL_I0780" FT repeat_region 866292..868606 FT /note="VSa2" FT repeat_region 866292..866315 FT /note="IR of VSa2" FT CDS 866373..866687 FT /transl_table=11 FT /locus_tag="VSAL_I0781" FT /old_locus_tag="TVS0630" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78466.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 866684..867031 FT /transl_table=11 FT /locus_tag="VSAL_I0782" FT /old_locus_tag="TVSa0121" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78467.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 867103..868590 FT /transl_table=11 FT /locus_tag="VSAL_I0783" FT /old_locus_tag="TVSa0122" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EHG8" FT /protein_id="CAQ78468.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 868583..868606 FT /note="IR of VSa2" FT tRNA complement(868719..868790) FT /locus_tag="VSAL_I3143t" FT /product="transfer RNA-Gln" FT tRNA complement(868844..868925) FT /locus_tag="VSAL_I3144t" FT /product="transfer RNA-Leu" FT tRNA complement(869045..869116) FT /locus_tag="VSAL_I3145t" FT /product="transfer RNA-Gln" FT tRNA complement(869170..869251) FT /locus_tag="VSAL_I3146t" FT /product="transfer RNA-Leu" FT tRNA complement(869371..869442) FT /locus_tag="VSAL_I3147t" FT /product="transfer RNA-Gln" FT tRNA complement(869496..869577) FT /locus_tag="VSAL_I3148t" FT /product="transfer RNA-Leu" FT tRNA complement(869657..869730) FT /locus_tag="VSAL_I3149t" FT /product="transfer RNA-Met" FT tRNA complement(869766..869847) FT /locus_tag="VSAL_I3150t" FT /product="transfer RNA-Leu" FT tRNA complement(869910..869967) FT /locus_tag="VSAL_I3151t" FT /product="transfer RNA-Gln" FT tRNA complement(869967..870038) FT /locus_tag="VSAL_I3152t" FT /product="transfer RNA-Gln" FT tRNA complement(870092..870173) FT /locus_tag="VSAL_I3153t" FT /product="transfer RNA-Leu" FT tRNA complement(870276..870349) FT /locus_tag="VSAL_I3154t" FT /product="transfer RNA-Met" FT CDS complement(870657..871748) FT /transl_table=11 FT /gene="engD" FT /locus_tag="VSAL_I0784" FT /old_locus_tag="TVS0640" FT /product="GTP-dependent nucleic acid-binding protein EngD" FT /db_xref="GOA:B6EHG9" FT /db_xref="InterPro:IPR004396" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR012675" FT /db_xref="InterPro:IPR012676" FT /db_xref="InterPro:IPR013029" FT /db_xref="InterPro:IPR023192" FT /db_xref="UniProtKB/TrEMBL:B6EHG9" FT /protein_id="CAQ78469.1" FT /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVP FT VPDLRLDVLAKIVNPERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVV FT RCFEDDNIIHVAGKISPIEDIEIINLELALADLDSCERAILRQAKKAKGGDQTAKFEIS FT VLEKLLPVFTEGGMARTVELSKEEVAAVSYLNFLTLKPTMYIANVAEDGFENNPFLDLV FT RDYATAENNVVVAVCAAIESELSELDDEDREEFFADMGIEEPGLNRVIRSGYDLLALQT FT YFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAEVVGYDNFIEFSGESGAKEAG FT KWRLEGKDYIVKDGDVVHFRFNV" FT misc_feature complement(871414..871742) FT /gene="engD" FT /locus_tag="VSAL_I0784" FT /note="HMMPfam hit to PF01926, GTPase of unknown FT function,score 9.9e-29" FT /inference="protein motif:HMMPfam:PF01926" FT misc_feature complement(871701..871724) FT /gene="engD" FT /locus_tag="VSAL_I0784" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(871722..871748) FT /gene="engD" FT /locus_tag="VSAL_I0784" FT /note="PS00443 Glutamine amidotransferases class-II active FT site." FT /inference="protein motif:ProSite:PS00443" FT CDS complement(871768..872358) FT /transl_table=11 FT /gene="pth" FT /locus_tag="VSAL_I0785" FT /old_locus_tag="TVS0641" FT /product="peptidyl-tRNA hydrolase" FT /EC_number="3.1.1.29" FT /db_xref="GOA:B6EHH0" FT /db_xref="InterPro:IPR001328" FT /db_xref="InterPro:IPR018171" FT /db_xref="UniProtKB/Swiss-Prot:B6EHH0" FT /protein_id="CAQ78470.1" FT /translation="MSNQIKLLVGLANPGLEYKRTRHNAGAWVVEELARIHNIPMREEA FT KFFGLTGRIQTNGQDLRLLIPTTFMNLSGKAIASIAKFYQIKPEEILVAHDELDLPPGV FT AKFKKGGGHGGHNGLRDTISKLANTKEFYRLRIGIGHPGHKDKVAGFVLGKAPTKEQEL FT IDAAVDESTRCLDILLKDGLSKAQNRLHTFKAE" FT misc_feature complement(871786..872238) FT /gene="pth" FT /locus_tag="VSAL_I0785" FT /note="HMMPfam hit to PF01195, Peptidyl-tRNA FT hydrolase,score 3.6e-59" FT /inference="protein motif:HMMPfam:PF01195" FT misc_feature complement(871993..872025) FT /gene="pth" FT /locus_tag="VSAL_I0785" FT /note="PS01196 Peptidyl-tRNA hydrolase signature 2." FT /inference="protein motif:ProSite:PS01196" FT CDS complement(872539..873537) FT /transl_table=11 FT /gene="prs" FT /locus_tag="VSAL_I0786" FT /old_locus_tag="TVS0642" FT /product="ribose-phosphate pyrophosphokinase" FT /EC_number="2.7.6.1" FT /note="Possible alternative translational start site after FT codon 17" FT /db_xref="GOA:B6EHH1" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR000842" FT /db_xref="InterPro:IPR005946" FT /db_xref="UniProtKB/TrEMBL:B6EHH1" FT /protein_id="CAQ78471.1" FT /translation="MQHIKFSQFGRNPEVSTVPDMKLFTGNATPELAQRIAERLYISLG FT DATVDRFSDGEVAVQINENVRGSDVFIIQSTCAPTNDNIMELVVMIDALRRASAGRITA FT VIPYFGYARQDRRVRSARVPITAKVIADMLSNVGVDRVLTIDLHAEQIQGFFDVPVDNI FT FGTPVLLDDMRTRGLENPVVVSPDLGGVVRARATAKALGDVDIAIVDKRRPRANVSEVM FT NLIGDVDGRDCVIVDDMIDTGGTLCKAAEALKERGAKRVFAYATHAVFSGTAAHNIANS FT VIDQVVVTDSIPLSKEMAATGKVTELSLSRMLAEAIRRISNEESISAMFDH" FT misc_feature complement(872677..873069) FT /gene="prs" FT /locus_tag="VSAL_I0786" FT /note="HMMPfam hit to PF00156, Phosphoribosyl transferase FT domain, score 2e-34" FT /inference="protein motif:HMMPfam:PF00156" FT misc_feature complement(872803..872841) FT /gene="prs" FT /locus_tag="VSAL_I0786" FT /note="PS00103 Purine/pyrimidine phosphoribosyl FT transferases signature." FT /inference="protein motif:ProSite:PS00103" FT misc_feature complement(873055..873102) FT /gene="prs" FT /locus_tag="VSAL_I0786" FT /note="PS00114 Phosphoribosyl pyrophosphate synthetase FT signature." FT /inference="protein motif:ProSite:PS00114" FT CDS complement(873525..874391) FT /transl_table=11 FT /gene="ispE" FT /locus_tag="VSAL_I0787" FT /old_locus_tag="TVS0643" FT /product="4-diphosphocytidyl-2-C-methyl-D-erythritol FT kinase" FT /EC_number="2.7.1.148" FT /db_xref="GOA:B6EHH2" FT /db_xref="InterPro:IPR004424" FT /db_xref="InterPro:IPR006204" FT /db_xref="InterPro:IPR013750" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/Swiss-Prot:B6EHH2" FT /protein_id="CAQ78472.1" FT /translation="MITTATRWPSPAKLNLFLYINGQHDNGYHELQTLFQFIDLCDHLT FT ITPNDSGEITLSPPIPGVEKKDNLIWKAATQLQEHTLCPLGAHIELEKILPIGGGIGGG FT SSNAATTLVALNFLWDLNLTNKELADLGVTLGADVPIFVHGFSAFAEGIGEKLQPANPK FT ELWYVLIKPEVSIATVDVFSHPELIRNTAKQPLNVLLSASYENDCEKIVRRVYPEVDYQ FT LSWLLEYAPSRLTGTGACVFAEFINEKEAQHVFSLIPDNATGFITRGRNTSPLNQALEE FT YKSLCNI" FT misc_feature complement(873600..873833) FT /gene="ispE" FT /locus_tag="VSAL_I0787" FT /note="HMMPfam hit to PF08544, GHMP kinases C FT terminal,score 0.0024" FT /inference="protein motif:HMMPfam:PF08544" FT misc_feature complement(873954..874130) FT /gene="ispE" FT /locus_tag="VSAL_I0787" FT /note="HMMPfam hit to PF00288, GHMP kinases N terminal FT domain, score 3.7e-16" FT /inference="protein motif:HMMPfam:PF00288" FT CDS complement(874388..874999) FT /transl_table=11 FT /locus_tag="VSAL_I0788" FT /old_locus_tag="TVS0644" FT /product="outer-membrane lipoprotein LolB precursor" FT /note="Expression may be stress-induced" FT /db_xref="GOA:B6EHH3" FT /db_xref="InterPro:IPR004565" FT /db_xref="UniProtKB/TrEMBL:B6EHH3" FT /protein_id="CAQ78473.1" FT /translation="MLRRPLSFFASVFFLLFFLSACSTTPLTPQQSTNWNKHQSNIEQL FT TQYKVTGKIGYQDLEQRHSLNFQWTQKEDNSQLLLTTFLGQTIMKLTLSKNKATIETGD FT GKKFEGNDPGRLLYGLTGMTIPIAYLSDWLKGLPTSADAFELNELNTVEHLSKQISQTN FT WHLRYNSYIETNGLLLPNSMKLTQKDTTIKIIASNWIISQ" FT misc_feature complement(874403..874870) FT /locus_tag="VSAL_I0788" FT /note="HMMPfam hit to PF03550, Outer membrane lipoprotein FT LolB, score 3.1e-50" FT /inference="protein motif:HMMPfam:PF03550" FT sig_peptide complement(874907..874999) FT /locus_tag="VSAL_I0788" FT misc_feature complement(874919..874987) FT /locus_tag="VSAL_I0788" FT misc_feature complement(874934..874966) FT /locus_tag="VSAL_I0788" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 875199..876455 FT /transl_table=11 FT /gene="hemA" FT /locus_tag="VSAL_I0789" FT /old_locus_tag="TVS0645" FT /product="glutamyl-tRNA reductase" FT /EC_number="1.2.1.70" FT /db_xref="GOA:B6EHH4" FT /db_xref="InterPro:IPR000343" FT /db_xref="InterPro:IPR006151" FT /db_xref="InterPro:IPR015895" FT /db_xref="InterPro:IPR015896" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR018214" FT /db_xref="UniProtKB/Swiss-Prot:B6EHH4" FT /protein_id="CAQ78474.1" FT /translation="MSLLVIGINHTSATVDLREKVAFSPDKLTKALDELKNSDAIKSGV FT ILSTCNRTEIYCEVKLGISSGYVINWLAEFHHVALDLLMPSIYIYEEQAAVKHLMRVSC FT GLDSLVLGEPQILGQVKKAFADAREHNAVEGVVEKLFQSDFSVAKRVRTETNIGGNAVS FT VAYAACTLARQIFESLAESTVMLVGAGETIELVAKHLNDAGCKQLIVANRTRERAMILA FT DQFNADVISLPEIPEHLSKADIIISSTASPLPIIGKGMVESALKQRRHQPMLFVDIAVP FT RDIESEVADLNDVYLYSVDDLKSIIDHNIEQRKIEAIQAEAIVSEESAGFMTWIRSRQA FT VNSIRQYRENSESIRIELLQKSIQALASGQNAEKVLAELSNKLTNKLIHAPTLAMQQAA FT KNGEPDKLAVIRTSIGLDN" FT misc_feature 875214..875666 FT /gene="hemA" FT /locus_tag="VSAL_I0789" FT /note="HMMPfam hit to PF05201, Glutamyl-tRNAGlu FT reductase,N-terminal d, score 2.6e-71" FT /inference="protein motif:HMMPfam:PF05201" FT misc_feature 875490..875561 FT /gene="hemA" FT /locus_tag="VSAL_I0789" FT /note="PS00747 Glutamyl-tRNA reductase signature." FT /inference="protein motif:ProSite:PS00747" FT misc_feature 875676..876113 FT /gene="hemA" FT /locus_tag="VSAL_I0789" FT /note="HMMPfam hit to PF01488, Shikimate / quinate FT 5-dehydrogenase, score 7.3e-71" FT /inference="protein motif:HMMPfam:PF01488" FT misc_feature 876150..876449 FT /gene="hemA" FT /locus_tag="VSAL_I0789" FT /note="HMMPfam hit to PF00745, Glutamyl-tRNAGlu FT reductase,dimerisation, score 1.6e-29" FT /inference="protein motif:HMMPfam:PF00745" FT CDS 876495..877583 FT /transl_table=11 FT /gene="prfA" FT /locus_tag="VSAL_I0790" FT /old_locus_tag="TVS0646" FT /product="peptide chain release factor 1" FT /db_xref="GOA:B6EHH5" FT /db_xref="InterPro:IPR000352" FT /db_xref="InterPro:IPR004373" FT /db_xref="InterPro:IPR005139" FT /db_xref="UniProtKB/Swiss-Prot:B6EHH5" FT /protein_id="CAQ78475.1" FT /translation="MKASIRVKLETLVERYEEVQHLLGDPGVIGDQNKFRALSREYSQL FT EEVTQCFQAYEKVQEDLVAAQEMAQEDDAEMREMAQDEIKEAKEASERLTDELQVLLIP FT KDPNDERNCFLEIRAGAGGDEAGIFAGNLFRMYSRFAEKKGWRIEVMSSHASEQGGFKE FT MIAKVSGDGAYGILKFESGGHRVQRVPETESQGRVHTSACTIAVMAEIPEADLPEIKSS FT DLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGTVVECQDERSQHKNKAKAMSVLAARII FT QAEEARRAAVVSDTRRNLLGSGDRSDRIRTYNYPQSRVSDHRINLTIYRLNEVMEGDLA FT ALIEPVVLEYQADQLAALAEQN" FT misc_feature 876693..877034 FT /gene="prfA" FT /locus_tag="VSAL_I0790" FT /note="HMMPfam hit to PF03462, PCRF domain, score 1e-67" FT /inference="protein motif:HMMPfam:PF03462" FT misc_feature 877122..877463 FT /gene="prfA" FT /locus_tag="VSAL_I0790" FT /note="HMMPfam hit to PF00472, Peptidyl-tRNA hydrolase FT domain, score 3.3e-71" FT /inference="protein motif:HMMPfam:PF00472" FT misc_feature 877182..877232 FT /gene="prfA" FT /locus_tag="VSAL_I0790" FT /note="PS00745 Prokaryotic-type class I peptide chain FT release factors signature." FT /inference="protein motif:ProSite:PS00745" FT CDS 877583..878449 FT /transl_table=11 FT /gene="hemK" FT /locus_tag="VSAL_I0791" FT /old_locus_tag="TVS0647" FT /product="protein methyltransferase HemK" FT /EC_number="2.1.1.-" FT /db_xref="GOA:B6EHH6" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR004556" FT /db_xref="InterPro:IPR007848" FT /db_xref="InterPro:IPR019874" FT /db_xref="UniProtKB/TrEMBL:B6EHH6" FT /protein_id="CAQ78476.1" FT /translation="MSISIEALLMRSIQLLKLEGSDSPQVDAAVLLCHVLDKPRSYLLT FT WPEKLVAETEYNAFESLLSRRLSGEPIAYIIGYREFWSLPLKVSPTTLIPRPDTERLVE FT VALEHLSPSSEKVLDLGTGTGAIALAIASEMPDMCVIGVDYQYDAVALAKDNAKDNNIL FT NTEFRQGSWFDPIRMDEQFSIIVSNPPYIDGNDPHLSQGDVRFEPQTALVAEKEGFADL FT IHIMEHSRTHLVENGWLLMEHGFEQGKQLRDYFEEYGFINVKTEQDYAGNDRVTLGQWI FT TNTENKG" FT misc_feature 877892..878347 FT /gene="hemK" FT /locus_tag="VSAL_I0791" FT /note="HMMPfam hit to PF05175, Methyltransferase small FT domain, score 5.9e-08" FT /inference="protein motif:HMMPfam:PF05175" FT misc_feature 878135..878155 FT /gene="hemK" FT /locus_tag="VSAL_I0791" FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT CDS 878453..878833 FT /transl_table=11 FT /locus_tag="VSAL_I0792" FT /old_locus_tag="TVS0648" FT /product="protein SirB, invasion gene expression FT up-regulator" FT /db_xref="InterPro:IPR007360" FT /db_xref="UniProtKB/TrEMBL:B6EHH7" FT /protein_id="CAQ78477.1" FT /translation="MYTAVKHIHLFMIACSVLLFIVRYALMMVDSDLRNKAFFKRVPHV FT VDTAMLLSGVALIFITGFIPFTGAAPWLTEKLTCVLVYIALGFVTLGNSKNKVFKTFAF FT LGALGWLMVAANIAMTKATFLG" FT misc_feature 878453..878827 FT /locus_tag="VSAL_I0792" FT /note="HMMPfam hit to PF04247, Invasion gene expression FT up-regulator, SirB, score 6.4e-45" FT /inference="protein motif:HMMPfam:PF04247" FT sig_peptide 878453..878533 FT /locus_tag="VSAL_I0792" FT misc_feature order(878480..878539,878576..878644,878657..878725, FT 878744..878812) FT /locus_tag="VSAL_I0792" FT CDS 878836..879645 FT /transl_table=11 FT /locus_tag="VSAL_I0793" FT /old_locus_tag="TVS0649" FT /product="protein SirB1" FT /db_xref="UniProtKB/TrEMBL:B6EHH8" FT /protein_id="CAQ78478.1" FT /translation="MFQLLDENLEDLSLVEGALALNLAINPDIQRQRVDIKLREMCIEA FT EQTLVHEPTDEQRLERLIQLFYVEWGYQGDVYTYFNSENAFIDHVLESKKGIPVTLGAI FT FLHICQYVNLPVSAINFPTQLVLQVEWPNQAPRYLNPFDGQYVSTHLMTAWLIGYGGPL FT AEILPIHLEKIDNPTLVGRLLAVIKTACIRERKFSFALTCSDLALNVVPDDPFEIRDRG FT LIYQQLHCNDVAKTDLIYFIEQCPNDPSTLMMKEQVQLLEQHPTVLH" FT CDS 879657..880511 FT /transl_table=11 FT /gene="kdsA" FT /locus_tag="VSAL_I0794" FT /old_locus_tag="TVS0650" FT /product="2-dehydro-3-deoxyphosphooctonate aldolase" FT /EC_number="2.5.1.55" FT /db_xref="GOA:B6EHH9" FT /db_xref="InterPro:IPR006218" FT /db_xref="InterPro:IPR006269" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:B6EHH9" FT /protein_id="CAQ78479.1" FT /translation="MQNQKTVKIGNIDVANDKPFTLFAGMNVLESRDLAMRMCETYVEI FT TDRLGIPYVFKASFDKANRSSVHSYRGPGMEEGLKIFQELKDTFGVKIITDIHTEAQAQ FT PVADVVDVIQLPAFLARQTDLVETMARTGAVINVKKPQFMSPDQVGNIVDKFAECGNEN FT IILCERGSCMGYDNLVVDMLGFGVMKKVSNGSPIIFDVTHSLQNRDPSGKASGGRRSQT FT VELAKAGLATGIAGLFIEAHPTPDKALCDGPSALPLDQLEPFLKQMKALDDLIKGFEHI FT DIK" FT misc_feature 879687..880487 FT /gene="kdsA" FT /locus_tag="VSAL_I0794" FT /note="HMMPfam hit to PF00793, DAHP synthetase I FT family,score 9.8e-117" FT /inference="protein motif:HMMPfam:PF00793" FT CDS complement(880601..881428) FT /transl_table=11 FT /gene="cysG" FT /locus_tag="VSAL_I0795" FT /old_locus_tag="TVS0651" FT /product="siroheme synthase (Includes: Uroporphyrin-III FT C-methyltransferase, Precorrin-2 FT dehydrogenase,Sirohydrochlorin ferrochelatase)" FT /EC_number="4.99.1.4" FT /EC_number="1.3.1.76" FT /EC_number="2.1.1.107" FT /note="The CDS appears to be truncated at the N-terminus in FT comparison to orthologues. Although other vibrio FT orthologues are found to be of similar size" FT /db_xref="GOA:B6EHI0" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR003043" FT /db_xref="InterPro:IPR006366" FT /db_xref="InterPro:IPR014776" FT /db_xref="InterPro:IPR014777" FT /db_xref="UniProtKB/TrEMBL:B6EHI0" FT /protein_id="CAQ78480.1" FT /translation="MESASIFIILFWNPIMPSIQAQSEQKKQNGFVSLVGPGPGDADLL FT TVKGYRLIQQADVVVYDRLVSKEILALANDTAEMIYVGKKLDFHFVPQDKINQILVDKA FT QEGKHVVRLKGGDSFIFGRGGEELETLAENGVRFEVVPGITAAAGATSYAGIPLTHRDH FT AQSVQFITAHVQKDGAEIEWDALVRSNNTLVFYMGLKQSSHISTQLIEHGLAADTPCAI FT IERGTTQKQKVFTGTISELAQMAKNAISPSLIVVGSVTTLHHKLDWFTPTNAE" FT misc_feature complement(880703..881338) FT /gene="cysG" FT /locus_tag="VSAL_I0795" FT /note="HMMPfam hit to PF00590, Tetrapyrrole FT (Corrin/Porphyrin) Methylas, score 4.6e-79" FT /inference="protein motif:HMMPfam:PF00590" FT misc_feature complement(881000..881101) FT /gene="cysG" FT /locus_tag="VSAL_I0795" FT /note="PS00840 Uroporphyrin-III C-methyltransferase FT signature 2." FT /inference="protein motif:ProSite:PS00840" FT CDS complement(881524..882336) FT /transl_table=11 FT /locus_tag="VSAL_I0796" FT /old_locus_tag="TVS0652" FT /product="formate/nitrite transporter" FT /db_xref="GOA:B6EHI1" FT /db_xref="InterPro:IPR000292" FT /db_xref="UniProtKB/TrEMBL:B6EHI1" FT /protein_id="CAQ78481.1" FT /translation="MSYVKPAELVQTMIDIGEAKVKTSSRDLLLRGTMAGIILSLAVVV FT AITTIVQTGVGIVGALVFPVGFCILSLMGYDLLTGVFGLAPLAKFDNRPGITWGRIFRT FT WGWVGLGNLIGSLLVAFLIALVFTMNFSVEAGAVGQKFIAAATSRTIGYAAHGMDGWIT FT VFVKAILCNLMVCLGVIGNMTSRSVAGKIAAMWLPIFIFFALVFEHAVVNMFLFPLGMM FT LGADFTIMDWLNWNLIPTLLGNLVGGLLFTCIPLYLTHAKTAPSLDLK" FT misc_feature complement(881542..882333) FT /locus_tag="VSAL_I0796" FT /note="HMMPfam hit to PF01226, Formate/nitrite transporter, FT score 8.8e-25" FT /inference="protein motif:HMMPfam:PF01226" FT misc_feature complement(order(881560..881628,881686..881754, FT 881791..881859,881956..882024,882085..882153, FT 882163..882231)) FT /locus_tag="VSAL_I0796" FT CDS complement(882434..882763) FT /transl_table=11 FT /gene="nirD" FT /locus_tag="VSAL_I0797" FT /old_locus_tag="TVS0653" FT /product="nitrite reductase (NAD(P)H) small subunit" FT /EC_number="1.7.1.4" FT /db_xref="GOA:B6EHI2" FT /db_xref="InterPro:IPR012748" FT /db_xref="InterPro:IPR017881" FT /db_xref="InterPro:IPR017941" FT /db_xref="UniProtKB/TrEMBL:B6EHI2" FT /protein_id="CAQ78482.1" FT /translation="MTTKFQKICPLDDIIPGTGVCALINGEQVAIFRPNADDQVFAISN FT RDPFANSNVLSRGLTVQHQGELWVASPLKKQRFNLTTGVCMEDERFNVKAYSVRVIKNT FT VEIAA" FT CDS complement(882766..885342) FT /transl_table=11 FT /gene="nirB" FT /locus_tag="VSAL_I0798" FT /old_locus_tag="TVS0654" FT /product="nitrite reductase (NAD(P)H) large subunit" FT /EC_number="1.7.1.4" FT /db_xref="GOA:B6EHI3" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR005117" FT /db_xref="InterPro:IPR006066" FT /db_xref="InterPro:IPR006067" FT /db_xref="InterPro:IPR007419" FT /db_xref="InterPro:IPR012744" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR017121" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:B6EHI3" FT /protein_id="CAQ78483.1" FT /translation="MSKMKLVIIGNGMVGHPYIEDLVEKTDVQNMDITVFCEEPRVAYD FT RVHLSSYFSHHTADELSLVKEGFYDKHGINVLIGERAININRENKIVYSSTGREIQYDK FT LVLATGSFPFVPPIKGNESKDCFVYRTIEDLKSIEATAKKSKSGVVIGGGLLGLEAAGA FT LKALGVTTHVVEFAPVLMAEQLDLQGGLQLRNKIERMGVQVHTGKNTLEIAPEGTEARN FT VMRFADGTELETDFIVFSAGIRPQDKLARQMELDIASRGGIAINNNCQTSDEHIYAIGE FT CASWNQTFYGLVAPGYKMATVAVDHLVGNDSTFEGADMSAKLKLLGVKVGSIGDANGRT FT PGCKSYVYQNEEDEVYKRIIVSEDGKKLLGAVMVGDTSDYGDLLQLKLNDIDLPDHPDL FT LILPAHAGAEKPSLGADSLPETAVICSCFDVTKGKIAQAVANGNHTMAEIKAVTGAGTG FT CGGCLPLVASVLNAELAKSGIEVKNDVCEHFAYSRQELFHLIRIEEIKTFDELLEKYGK FT GYGCEVCKPLAGSILASCWGEHILKPALVKLHDTNDNFLGNIQKDGTYSVIPRMAGGEV FT TPQALGALAAVAAEYNLYTKITGAQRIGLFGAQKDDLPTIWKKLIEAGYETGQAYGKAL FT RMAKTCVGSTWCRYGVQDSVGLGVTLENRYKGIRTPHKMKFGVSGCTRECAEAQGKDLG FT IIATDAGWNMYVCGNGGMKPRHADLLATDLDQETLIKYIDRFMMFYIRTAAPLQRTSVW FT MDNLEGGVDYLREVIVDNKLGINDQLETDVASLINNFSCEWTDTINDEAQLKRFSHFIN FT SEERDDNVVFVSDGREQHRPATYTEKNPNAKGDILHVALTDTSVEK" FT misc_feature complement(883012..883452) FT /gene="nirB" FT /locus_tag="VSAL_I0798" FT /note="HMMPfam hit to PF01077, Nitrite and sulphite FT reductase 4Fe-4S do, score 2.2e-44" FT /inference="protein motif:HMMPfam:PF01077" FT misc_feature complement(883258..883308) FT /gene="nirB" FT /locus_tag="VSAL_I0798" FT /note="PS00365 Nitrite and sulfite reductases FT iron-sulfur/siroheme-binding site." FT /inference="protein motif:ProSite:PS00365" FT misc_feature complement(883474..883677) FT /gene="nirB" FT /locus_tag="VSAL_I0798" FT /note="HMMPfam hit to PF03460, Nitrite/Sulfite reductase FT ferredoxin-lik, score 1.4e-19" FT /inference="protein motif:HMMPfam:PF03460" FT misc_feature complement(883921..884079) FT /gene="nirB" FT /locus_tag="VSAL_I0798" FT /note="HMMPfam hit to PF04324, BFD-like [2Fe-2S] binding FT domain, score 2.3e-22" FT /inference="protein motif:HMMPfam:PF04324" FT misc_feature complement(884482..885330) FT /gene="nirB" FT /locus_tag="VSAL_I0798" FT /note="HMMPfam hit to PF07992, Pyridine FT nucleotide-disulphide oxidoredu, score 5.7e-47" FT /inference="protein motif:HMMPfam:PF07992" FT misc_feature complement(884617..884904) FT /gene="nirB" FT /locus_tag="VSAL_I0798" FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidoredu, score 1.2e-20" FT /inference="protein motif:HMMPfam:PF00070" FT CDS complement(885635..887509) FT /transl_table=11 FT /locus_tag="VSAL_I0799" FT /old_locus_tag="TVS0655" FT /product="methyl-accepting chemotaxis protein" FT /db_xref="GOA:B6EHI4" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR004010" FT /db_xref="InterPro:IPR004089" FT /db_xref="UniProtKB/TrEMBL:B6EHI4" FT /protein_id="CAQ78484.1" FT /translation="MKLKHKLIGASLLAVIVTAAALTWLASNQLFEQTRNGVYSRAESV FT TSSATTGISNWISIKAEIAHAINDYTQEDDVVSFLQLSRKAGGFDNIFFGTPQGDMYRS FT HPERNRADYDPRQRPWYQEAQRENKQIITSAYQDAITQSLLVTIAEPVYKNGQFLGVVG FT ADVLIDQLIDDVISLDAGKDTITMLIDSDGTFLTHPNTSLIKKEVNRYFSGMTPQSIQE FT SINSKTIEFAEINGSNKLVYFAKVPNTKWTFAVEMTQATEEAAHSALLREIILLSIVLT FT VIVVIGVTTLVNVLFRDLLRVSDALAEISSGEGDLTQRLIPNSNDEVGQLAINFNTFVG FT NMHSMVCRLRDISLTLANQANLTAESAEERNVRIQHQMDEINMVATAINEMAAATQEIA FT SNADNTAQTAEQTVSASNHGAEQVSQSQHSIDNLAKEVETATQVIGELHHNAQNINTIL FT STIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRILSQRTHASTQEIQQMIETL FT QGTTQKAVGIMEDSQNLANTSVEDAQSASASLLQITNSVTLISDMAAQIAAAAEEQSSV FT TEEITRNTEAVRDVSNELTTETQQSVIQASQLSELSNELKQEIDRFKL" FT misc_feature complement(885641..886387) FT /locus_tag="VSAL_I0799" FT /note="HMMPfam hit to PF00015, Methyl-accepting chemotaxis FT protein (MCP) s, score 6.9e-59" FT /inference="protein motif:HMMPfam:PF00015" FT misc_feature complement(886478..886693) FT /locus_tag="VSAL_I0799" FT /note="HMMPfam hit to PF00672, HAMP domain, score 4.2e-14" FT /inference="protein motif:HMMPfam:PF00672" FT misc_feature complement(order(886622..886690,887432..887491)) FT /locus_tag="VSAL_I0799" FT misc_feature complement(886877..887116) FT /locus_tag="VSAL_I0799" FT /note="HMMPfam hit to PF02743, Cache domain, score 4.4e-15" FT /inference="protein motif:HMMPfam:PF02743" FT sig_peptide complement(887447..887509) FT /locus_tag="VSAL_I0799" FT CDS 887932..889593 FT /transl_table=11 FT /gene="nutA" FT /locus_tag="VSAL_I0800" FT /old_locus_tag="TVS0656" FT /product="5'-nucleotidase precursor" FT /EC_number="3.1.3.5" FT /db_xref="GOA:B6EHI5" FT /db_xref="InterPro:IPR004843" FT /db_xref="InterPro:IPR006146" FT /db_xref="InterPro:IPR006179" FT /db_xref="InterPro:IPR008334" FT /db_xref="UniProtKB/TrEMBL:B6EHI5" FT /protein_id="CAQ78485.1" FT /translation="MMERLSLKTAIAAALLTTLAGCATTSEHAWQEDTTYKLTVLHTND FT NHGRFWQNKYGEYGMAARKTLIDELRADVQAEGGSVLLLSGGDINTGVPESDLQDAEPD FT FKGMNKIGYDAIALGNHEFDNPLDVLQKQIDWAKFPMLSANIYDKETGERMYQAYEIFE FT KQGIKIAVIGFTTEDTAKIGNPEYIGGIDFRDPKEEAKKVIAELNESEKPDLIFAVTHM FT GHYENGQRGINAPGDVALARSLELGELDMIVGGHSQEPVCMEGANVVKQNFKPGDECQP FT DQQNGTWIVQAHEWGKYVGRADFEFRNGELEMVSYNLIPVNLKKKIKVDGKSERVFIQD FT EIVQDPELLAFLTPYQEKGQGQLNVKIAETNGKLEGDRNVVRFEQTNLGRLIATSHMVR FT AKADFAVMNSGGVRDSIEMGDVTYKDVLTVQPFGNIVSYVDMNRAEVLDYLNVVATKPI FT DSGAYAQFAGIKMTVEAGKVSNVFIGGKQLRLDKTYRFTIPSYNAAGGDGYPKVSGHSG FT YVNTGFVDAEVLKEFLETNSPIDVNEFAPRGEIVYK" FT sig_peptide 887932..888018 FT /gene="nutA" FT /locus_tag="VSAL_I0800" FT misc_feature 887965..887997 FT /gene="nutA" FT /locus_tag="VSAL_I0800" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 888043..888711 FT /gene="nutA" FT /locus_tag="VSAL_I0800" FT /note="HMMPfam hit to PF00149, Calcineurin-like FT phosphoesterase, score 1.7e-19" FT /inference="protein motif:HMMPfam:PF00149" FT misc_feature 888043..888081 FT /gene="nutA" FT /locus_tag="VSAL_I0800" FT /note="PS00785 5'-nucleotidase signature 1." FT /inference="protein motif:ProSite:PS00785" FT misc_feature 888268..888303 FT /gene="nutA" FT /locus_tag="VSAL_I0800" FT /note="PS00786 5'-nucleotidase signature 2." FT /inference="protein motif:ProSite:PS00786" FT misc_feature 889027..889473 FT /gene="nutA" FT /locus_tag="VSAL_I0800" FT /note="HMMPfam hit to PF02872, 5'-nucleotidase, C-terminal FT domain, score 1.1e-47" FT /inference="protein motif:HMMPfam:PF02872" FT tRNA 889776..889849 FT /locus_tag="VSAL_I3155t" FT /product="transfer RNA-Pro" FT CDS complement(889989..890423) FT /transl_table=11 FT /locus_tag="VSAL_I0801" FT /old_locus_tag="TVS0657" FT /product="putative exported protein" FT /db_xref="InterPro:IPR007332" FT /db_xref="UniProtKB/TrEMBL:B6EHI6" FT /protein_id="CAQ78486.1" FT /translation="MKLFKLTFASLLFLTTSAYASTEVMTYKSPYCGCCSEWVEHMEDN FT GFTVKIEDHEDMNPIKEKLGVEPRLASCHTAVIDGYVFEGHIPAEDIKQFLAEPRDFKG FT LAVPGMPMGSPGMEYGDKKDTYQVIAFKENGKLAIFNTHN" FT misc_feature complement(890034..890300) FT /locus_tag="VSAL_I0801" FT /note="HMMPfam hit to PF04214, Protein of unknown function, FT DUF, score 1.4e-53" FT /inference="protein motif:HMMPfam:PF04214" FT sig_peptide complement(890364..890423) FT /locus_tag="VSAL_I0801" FT CDS complement(890523..893231) FT /transl_table=11 FT /gene="copA" FT /locus_tag="VSAL_I0802" FT /old_locus_tag="TVS0658" FT /product="copper-transporting P-type ATPase" FT /EC_number="3.6.3.4" FT /note="CDS is extended at the N-terminus in comparison to FT orthologues other than vibrio orthologues" FT /db_xref="GOA:B6EHI7" FT /db_xref="InterPro:IPR000150" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006121" FT /db_xref="InterPro:IPR006403" FT /db_xref="InterPro:IPR006404" FT /db_xref="InterPro:IPR006416" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR017969" FT /db_xref="InterPro:IPR018303" FT /db_xref="InterPro:IPR023214" FT /db_xref="InterPro:IPR023299" FT /db_xref="InterPro:IPR023300" FT /db_xref="UniProtKB/TrEMBL:B6EHI7" FT /protein_id="CAQ78487.1" FT /translation="MSQKLTLPLAGLNCGRCIAKVEKALSEIPKISHFSVTKTELTLTT FT TLSYEEIAENITQLGYSIPEPELITLYLAGLKCGKCINKTTDTLSTLSHTSIESISKDK FT ITLNTVHSQESIIELIESIGFQASSAPFIPDSPLPKEEVITLNKETPTDQSKTEKQKIE FT KTTQLILSGMTCASCVASVEKIISAVANVQSVSVNLAERTALIYGDINAPELIKAIEKG FT GYGAEISLSEEQRRKSQKEQYLKTTVAHKRNTIMSLAIGAPLMLWGVFGGNMQITTVND FT QLAWGLIGLICLGLLLTAGKHFFVNAWKAFTHHRATMDTLVSLGTGSAWLYSMALVIYP FT AFFPEQARHVYFEATAMILGLITLGNLIETKARNRTSNAIEKLLNLQPQTATVIQDGKE FT VELPVALVTKGMIIKIKPGEKIPVDGSIISGESYLDEAMLTGEPLPCLKIKDDVVHAGT FT INQQGSFTFTATNVGEHTMLARIIAMVRNAQSSKPKLAKLADKISSVFVPSVMIIAIFS FT ALLWYNFGPEPTSSYMLVVATTVLIIACPCALGLATPMSVTVGVGKAAEFGALIKDADV FT LQTASHIDTVVVDKTGTLTEGKPTVSKVTSFAAYNEKDIISFAAAIESHSEHPLAHAVM FT TYLNQHSWDLVTSTQFNAQLGLGASANIAGETVFIGNTSYLLNNEIATPDVELSPASTP FT LFVAINKECIGVIEVSDAIRPDSKLAVAQFTQLGINVVMLTGDRKETANYVAQQLGITH FT VVSGVLPDGKAQTIKDLQAQGKKVAMIGDGINDAPALAQAEVGIAMGNGSDVAIESAQL FT TLIRHSLLTAVNAIELSRATITNMKQNLFGAFIYNAIGIPIAAGILFSFTGMLLSPVVA FT GAAMALSSITVVSNANRLRLFKSQFSNKHTD" FT misc_feature complement(order(890574..890642,890655..890714, FT 891573..891641,891669..891728,892128..892187, FT 892203..892271,892308..892376,892404..892472)) FT /gene="copA" FT /locus_tag="VSAL_I0802" FT misc_feature complement(890823..891485) FT /gene="copA" FT /locus_tag="VSAL_I0802" FT /note="HMMPfam hit to PF00702, haloacid dehalogenase-like FT hydrolase, score 1.8e-30" FT /inference="protein motif:HMMPfam:PF00702" FT misc_feature complement(890826..890894) FT /gene="copA" FT /locus_tag="VSAL_I0802" FT /note="PS01229 Hypothetical cof family signature 2." FT /inference="protein motif:ProSite:PS01229" FT misc_feature complement(891447..891467) FT /gene="copA" FT /locus_tag="VSAL_I0802" FT /note="PS00154 E1-E2 ATPases phosphorylation site." FT /inference="protein motif:ProSite:PS00154" FT misc_feature complement(891495..892163) FT /gene="copA" FT /locus_tag="VSAL_I0802" FT /note="HMMPfam hit to PF00122, E1-E2 ATPase, score 6.2e-94" FT /inference="protein motif:HMMPfam:PF00122" FT misc_feature complement(892548..892733) FT /gene="copA" FT /locus_tag="VSAL_I0802" FT /note="HMMPfam hit to PF00403, Heavy-metal-associated FT domain, score 2.9e-12" FT /inference="protein motif:HMMPfam:PF00403" FT misc_feature complement(892635..892724) FT /gene="copA" FT /locus_tag="VSAL_I0802" FT /note="PS01047 Heavy-metal-associated domain." FT /inference="protein motif:ProSite:PS01047" FT misc_feature complement(893037..893216) FT /gene="copA" FT /locus_tag="VSAL_I0802" FT /note="HMMPfam hit to PF00403, Heavy-metal-associated FT domain, score 0.0019" FT /inference="protein motif:HMMPfam:PF00403" FT CDS 893319..893717 FT /transl_table=11 FT /gene="cueR" FT /locus_tag="VSAL_I0803" FT /old_locus_tag="TVS0659" FT /product="HTH-type transcriptional regulator CueR (copper FT export regulator)" FT /db_xref="GOA:B6EHI8" FT /db_xref="InterPro:IPR000551" FT /db_xref="InterPro:IPR009061" FT /db_xref="InterPro:IPR011789" FT /db_xref="InterPro:IPR015358" FT /db_xref="UniProtKB/TrEMBL:B6EHI8" FT /protein_id="CAQ78488.1" FT /translation="MNISDVAKLTGLTTKAIRFYESKGVIREANRSANGYRQYTKNQVE FT ELQLIRRSRLVGFSLEECQELLSLSNNPNRRSADVKRKTLEKVTEIEAKIKELEGMKQT FT LLELANACPGDESHDCPIIKGLTCCHNK" FT misc_feature 893319..893384 FT /gene="cueR" FT /locus_tag="VSAL_I0803" FT /note="Predicted helix-turn-helix motif with score FT 1580.000, SD 4.57 at aa 1-22, sequence FT MNISDVAKLTGLTTKAIRFYES" FT misc_feature 893322..893435 FT /gene="cueR" FT /locus_tag="VSAL_I0803" FT /note="HMMPfam hit to PF00376, MerR family regulatory FT protein, score 2e-11" FT /inference="protein motif:HMMPfam:PF00376" FT misc_feature 893328..893396 FT /gene="cueR" FT /locus_tag="VSAL_I0803" FT /note="PS00552 Bacterial regulatory proteins, merR family FT signature." FT /inference="protein motif:ProSite:PS00552" FT CDS complement(893742..894596) FT /transl_table=11 FT /locus_tag="VSAL_I0804" FT /old_locus_tag="TVS0660" FT /product="thioredoxin" FT /db_xref="GOA:B6EHI9" FT /db_xref="InterPro:IPR005746" FT /db_xref="InterPro:IPR006822" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR013766" FT /db_xref="UniProtKB/TrEMBL:B6EHI9" FT /protein_id="CAQ78489.1" FT /translation="MQSEHSVELNEQNFQQILEGSTQTPVLIHFWAPMSQESITVIPAL FT QQLAQQYGDAVTLVLLNCEEQQGLAQQFGVQTLPTIALFKSGQAIDGMGGPQSIDAILG FT MLDKHLPSQEELQLGQAFKLVEEGNYQSALPILLALLEHFGGNGQIKLHIAQCYIETQS FT YEQAETILSEILMQDQDSKYKELIAKLQLHKQAGNTPEIQALEDQYKADTTNNEIALEL FT AIQYSQVNRQEEALDILIAILLKDLNAEDGQVKKTMMDILSALGQGNPIAGKYRRQLYS FT LLY" FT misc_feature complement(894270..894584) FT /locus_tag="VSAL_I0804" FT /note="HMMPfam hit to PF00085, Thioredoxin, score 5.3e-07" FT /inference="protein motif:HMMPfam:PF00085" FT misc_feature complement(894465..894596) FT /locus_tag="VSAL_I0804" FT /note="PS00430 TonB-dependent receptor proteins signature FT 1." FT /inference="protein motif:ProSite:PS00430" FT CDS complement(894931..895758) FT /transl_table=11 FT /locus_tag="VSAL_I0805" FT /old_locus_tag="TVS0661" FT /product="putative exported NAD-or NADP-dependent FT oxidoreductase" FT /db_xref="GOA:B6EHJ0" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020904" FT /db_xref="UniProtKB/TrEMBL:B6EHJ0" FT /protein_id="CAQ78490.1" FT /translation="MQRAIFITGCSTGIGYTTAHQLSKHGFHVIASCRKKEDVLRLQNE FT GLTCLHLDYSDSESISLAVSELLALTDGKLYALFNNGAYGQAGALEDLPREALKEQFEA FT NFFGWHQLVIELLPIMRKQGYGRIIQNSSVLGIVAMKYRGAYNSSKFAIEGWSDTLRLE FT LMQTNIQISLIEPGPIETNFRSNALKAFKKWVTIENSPHKEKYLMQQQRLEKEASGSAF FT VLPPESIMSPLLHALNSKKPKARYRVTFPTHLFAILKRLLPTKWLDMILNKSD" FT misc_feature complement(895264..895752) FT /locus_tag="VSAL_I0805" FT /note="HMMPfam hit to PF00106, short chain FT dehydrogenase,score 1.2e-07" FT /inference="protein motif:HMMPfam:PF00106" FT misc_feature complement(895276..895362) FT /locus_tag="VSAL_I0805" FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT /inference="protein motif:ProSite:PS00061" FT sig_peptide complement(895702..895758) FT /locus_tag="VSAL_I0805" FT CDS complement(895887..896792) FT /transl_table=11 FT /locus_tag="VSAL_I0806" FT /old_locus_tag="TVS0662" FT /product="putative NAD dependent epimerase/dehydratase" FT /db_xref="GOA:B6EHJ1" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR010099" FT /db_xref="InterPro:IPR013549" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EHJ1" FT /protein_id="CAQ78491.1" FT /translation="MKILITGSTGLIGKKLLDHLKGHHLVLLTRNIKKAQTALNHLALP FT HADFISDLSTLSHLNDFDTIINLAGEPIADKKWTNKQKRTILDSRCELTHALTQLCLAS FT STPPRCFISGSAVGYYSDQGSNDIDESTVISSNDFAHRVCKEWEDVALKANNEGTRVCI FT LRTGVVLATSGGALKKMLLPYQCGVGGPIGKGAQYMSWIHIDDMVYAILFLLEHEKSQG FT IYNLTAPHPVTNKEFSQTLASTLKRPHLLVTPTLVIKILLGEASVLLTDSQRIRPKRLV FT NEGFKFRYSRIESALKHLLG" FT misc_feature complement(895893..896036) FT /locus_tag="VSAL_I0806" FT /note="HMMPfam hit to PF08338, Domain of unknown function FT (DUF1731), score 6.2e-22" FT /inference="protein motif:HMMPfam:PF08338" FT misc_feature complement(896112..896786) FT /locus_tag="VSAL_I0806" FT /note="HMMPfam hit to PF01370, NAD dependent FT epimerase/dehydratase fam, score 1e-08" FT /inference="protein motif:HMMPfam:PF01370" FT misc_feature complement(896160..896780) FT /locus_tag="VSAL_I0806" FT /note="HMMPfam hit to PF07993, Male sterility protein,score FT 0.0039" FT /inference="protein motif:HMMPfam:PF07993" FT CDS 896899..897480 FT /transl_table=11 FT /gene="yfcE" FT /locus_tag="VSAL_I0807" FT /old_locus_tag="TVS0663" FT /product="phosphodiesterase yfce (ec 3.1.4.-)" FT /EC_number="3.1.4.-" FT /db_xref="GOA:B6EHJ2" FT /db_xref="InterPro:IPR000979" FT /db_xref="InterPro:IPR024654" FT /db_xref="UniProtKB/TrEMBL:B6EHJ2" FT /protein_id="CAQ78492.1" FT /translation="MCIINLGHHVKLFFASDLHGSLPATQRMIELFLASKAEHLILLGD FT LINFGPRNPLPEGHNPIAVAELLNEHAESIIAVRGNCDSEVDQMLLSFPIMADFHIVLL FT PTGQKIFLTHGHIYNAEKRPLLRKGDIIAHGHTHITVAEWQGEHIIFNPGSTTFPRIVG FT EKPSYGLLDELTLSVYDFDGNTLNSIGLSS" FT misc_feature 896926..897318 FT /gene="yfcE" FT /locus_tag="VSAL_I0807" FT /note="HMMPfam hit to PF00149, Calcineurin-like FT phosphoesterase, score 2.5e-14" FT /inference="protein motif:HMMPfam:PF00149" FT repeat_region order(897515..898422,900739..901246) FT /note="VSa1" FT repeat_region 897515..897533 FT /note="IR of VSa1" FT CDS join(897606..898421,900742..901233) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0808" FT /old_locus_tag="TVS0664" FT /product="transposase (pseudogene)" FT /note="Similar to Escherichia coli Transposase InsG for FT insertion sequence element IS4 UniProt:P03835 (442 aa) FT fasta scores: E()=2.4e-77, 48.843% id in 432 aa. CDS is FT disrupted by the insertion of an IS element after codon FT 272" FT /db_xref="PSEUDO:CAQ78493.1" FT /inference="similar to sequence:UniProt:P03835" FT misc_feature 897984..898415 FT /locus_tag="VSAL_I0808" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 0.00011" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 898427..900738 FT /note="VSa2" FT repeat_region 898427..898450 FT /note="IR of VSa2" FT CDS 898508..898819 FT /transl_table=11 FT /locus_tag="VSAL_I0809" FT /old_locus_tag="TVSb0001" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EHJ4" FT /protein_id="CAQ78494.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCSNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPATEPHWIGLLLKGYQS" FT CDS 898816..899163 FT /transl_table=11 FT /locus_tag="VSAL_I0810" FT /old_locus_tag="TVSb0002" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78495.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 899235..900722 FT /transl_table=11 FT /locus_tag="VSAL_I0811" FT /old_locus_tag="TVS0667" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EGR2" FT /protein_id="CAQ78496.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 900715..900738 FT /note="IR of VSa2" FT repeat_region 901228..901246 FT /note="IR of VSa1" FT CDS complement(901288..901833) FT /transl_table=11 FT /gene="toxS" FT /locus_tag="VSAL_I0812" FT /old_locus_tag="TVS0669" FT /product="transmembrane regulatory protein ToxS" FT /db_xref="GOA:B6EHJ7" FT /db_xref="UniProtKB/TrEMBL:B6EHJ7" FT /protein_id="CAQ78497.1" FT /translation="MWLNKEQVPLMKRFFPLALLLLSILGSAWFYWASDSKVEQLLTSK FT EWQSMRTIRIDTNYEDMGPLKRADIRSNVVYLPNKTYSKSSNLTLFSPSDDKQQPLTIN FT VMETGNWDYSGDYLLIDPTEFKDVTSNDNKEFTGSQKELIMRVFRMDAQQSKRVDVLND FT KTLLLTSLNYGSDILFSH" FT sig_peptide complement(901735..901833) FT /gene="toxS" FT /locus_tag="VSAL_I0812" FT misc_feature complement(901738..901797) FT /gene="toxS" FT /locus_tag="VSAL_I0812" FT CDS complement(join(901824..902678,902678..902695)) FT /pseudo FT /transl_table=11 FT /gene="toxR" FT /locus_tag="VSAL_I0813" FT /old_locus_tag="TVS0670" FT /product="transcriptional regulator ToxR protein FT (pseudogene)" FT /note="Similar to Vibrio fischeri ToxR protein FT UniProt:Q56689 (316 aa) fasta scores: E()=2.1e-62, 68.651% FT id in 252 aa. CDS contains a frameshift after codon 5. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ78498.1" FT /inference="similar to sequence:UniProt:Q56689" FT misc_feature complement(902376..902591) FT /gene="toxR" FT /locus_tag="VSAL_I0813" FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C ter, score 2.6e-18" FT /inference="protein motif:HMMPfam:PF00486" FT CDS 902909..904807 FT /transl_table=11 FT /gene="htpG" FT /locus_tag="VSAL_I0814" FT /old_locus_tag="TVS0671" FT /product="chaperone protein HtpG (heat shock protein HtpG)" FT /db_xref="GOA:B6EHJ9" FT /db_xref="InterPro:IPR001404" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR019805" FT /db_xref="InterPro:IPR020568" FT /db_xref="InterPro:IPR020575" FT /db_xref="UniProtKB/Swiss-Prot:B6EHJ9" FT /protein_id="CAQ78499.1" FT /translation="MSEQTINNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNAS FT DASDKLRFKALSNGDLYEGNADLGVKISFNVEANTLTISDNGIGMGREDVIEHLGTIAK FT SGTADFFSKLSEDQSKDSQLIGQFGVGFYSAFIVADAVTVRTRVAGAAKDQAVQWHSEG FT EGDYTIEDVTKESRGTDIILHMRDEGKEFLSEWRLKEVIGKYSDHIGIPVSIWTVEKDE FT EGKETEGKWEQVNKAQALWTRNKSEIEDAEYQEFYKHVSHDFADPLTWSHNKVEGKNDY FT TSLLYIPAKAPFDMMNRDHKSGLKLYVQRVFVMDDAEQFMPSYLRFVKGLIDSNDLALN FT VSREILQDNKVTQSLRGACTKRVLSMLEKIAKKDNDKYLSFWKEFGQVLKEGLAEDFAN FT KDKIAGLLRFASTNKDSSEQAISLASYVERMKEDQDKIFYLTSDSYAAAKNSPHLEQFK FT SKGIEVVLMYDRIDEWLMSYLTEFDGKQFQSITKAGLDLSKFENEAEKEKQKETTEEFK FT SVVERTKAYLGDRVKEVRTTFKLATTPAVVVTDDFEMGTQMAKLLEAAGQAAPEVKYIF FT EINPEHALIKQMADEADEEAFGRWVEMLLGQAMLAERGSLDDPSQFLSAMNQLLSK" FT misc_feature 902996..903025 FT /gene="htpG" FT /locus_tag="VSAL_I0814" FT /note="PS00298 Heat shock hsp90 proteins family signature." FT /inference="protein motif:ProSite:PS00298" FT misc_feature 903002..903472 FT /gene="htpG" FT /locus_tag="VSAL_I0814" FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HSP90, score 2e-09" FT /inference="protein motif:HMMPfam:PF02518" FT misc_feature 903479..904804 FT /gene="htpG" FT /locus_tag="VSAL_I0814" FT /note="HMMPfam hit to PF00183, Hsp90 protein, score FT 1.8e-90" FT /inference="protein motif:HMMPfam:PF00183" FT CDS 905084..905731 FT /transl_table=11 FT /gene="adk" FT /locus_tag="VSAL_I0815" FT /old_locus_tag="TVS0672" FT /product="adenylate kinase" FT /EC_number="2.7.4.3" FT /db_xref="GOA:B6EHK0" FT /db_xref="InterPro:IPR000850" FT /db_xref="InterPro:IPR006259" FT /db_xref="InterPro:IPR007862" FT /db_xref="UniProtKB/Swiss-Prot:B6EHK0" FT /protein_id="CAQ78500.1" FT /translation="MRIILLGAPGAGKGTQAQFIMDKFGIPQISTGDMLRAAIIKAGTE FT MGKQAKSVIDAGQLVSDEIILGLVKERIAQEDCAKGFLLDGFPRTIPQADGLKENGVSI FT DYVLEFDVADEVIVERMSGRRAHLPSGRTYHVTFNPSKVEGQDDVTGEPLVIREDDKPE FT TVLARLGVYHEQTAPLIAYYTKEAEAGKTEYLKFDGTKLVAEVSAEIEKVLS" FT misc_feature 905096..905647 FT /gene="adk" FT /locus_tag="VSAL_I0815" FT /note="HMMPfam hit to PF00406, Adenylate kinase, score FT 4.8e-95" FT /inference="protein motif:HMMPfam:PF00406" FT misc_feature 905327..905362 FT /gene="adk" FT /locus_tag="VSAL_I0815" FT /note="PS00113 Adenylate kinase signature." FT /inference="protein motif:ProSite:PS00113" FT misc_feature 905453..905560 FT /gene="adk" FT /locus_tag="VSAL_I0815" FT /note="HMMPfam hit to PF05191, Adenylate kinase, active FT site lid, score 5.7e-17" FT /inference="protein motif:HMMPfam:PF05191" FT CDS 905815..906783 FT /transl_table=11 FT /gene="hemH" FT /locus_tag="VSAL_I0816" FT /old_locus_tag="TVS0673" FT /product="ferrochelatase" FT /EC_number="4.99.1.1" FT /db_xref="GOA:B6EHK1" FT /db_xref="InterPro:IPR001015" FT /db_xref="InterPro:IPR019772" FT /db_xref="UniProtKB/Swiss-Prot:B6EHK1" FT /protein_id="CAQ78501.1" FT /translation="MNNKKAGVLLVNLGTPTAPTAAAVKTFLSEFLHDKRVVDMNRFIW FT CPLLHGVILPIRAPKVAKLYQSVWMEDDSPLMVYSQRQVSALQDRLSLPVALGMTYGQP FT AIKSGIELLEEQGCDEIIILPLYPQYSRTTTAAVFDQIGKQYKTTSVLPNFTMVHNYHD FT HPLYIKALAESIRLSWKEKGKGDYVLCSYHGIPQRFVDNGDIYAEHCIRTTELLAEELG FT LNSEQIGMSYQSRFGREAWLQPYTSETLKELAPKGIKSLDIISPAFSVDCLETLEELSE FT ECKEIYMTAGGEKYTFIPCLNDDELHIEMMAAIVSSKISRS" FT sig_peptide 905815..905883 FT /gene="hemH" FT /locus_tag="VSAL_I0816" FT misc_feature 905827..906771 FT /gene="hemH" FT /locus_tag="VSAL_I0816" FT /note="HMMPfam hit to PF00762, Ferrochelatase, score FT 1.1e-109" FT /inference="protein motif:HMMPfam:PF00762" FT misc_feature 906376..906432 FT /gene="hemH" FT /locus_tag="VSAL_I0816" FT /note="PS00534 Ferrochelatase signature." FT /inference="protein motif:ProSite:PS00534" FT CDS 907133..908431 FT /transl_table=11 FT /gene="tig" FT /locus_tag="VSAL_I0817" FT /old_locus_tag="TVS0674" FT /product="trigger factor (TF)" FT /db_xref="GOA:B6EHK2" FT /db_xref="InterPro:IPR001179" FT /db_xref="InterPro:IPR005215" FT /db_xref="InterPro:IPR008880" FT /db_xref="InterPro:IPR008881" FT /db_xref="UniProtKB/Swiss-Prot:B6EHK2" FT /protein_id="CAQ78502.1" FT /translation="MQVTVETKEGLERVLTITVPAANIEDAVNAELRNIAKNRRFDGFR FT KGKVPMKMVAKMYGSAVRHDKMGEVMQRHFIEAIVKDKINPAGAPTFAPVEFAEGQDLV FT FTATFEIYPEVTLQGLDKVVVEKPQVEVKDEDVAEMLETLRKQQATWSDADVAAEDGTR FT ATINFVGSIDGELFEGGKADNFPLEMGQGRMIPGFEDGIKGKKAGDELTINVNFPEDYH FT AENLKGKAAEFAITVVKVEARELPEMNDEFVTKFGAQGGVEGLKTEVRKNMERELAQTV FT KNKIKEQAINGLVEQNNIDVPSALIDQEVQVLRQQAVQRFGGNADSAPELPRELFEEQA FT KRRVVVGLLLGEVIKTEELKADDEKVKALINEMASAYEDPTEVVAYYEGNEQMMNNMRN FT VALEEQAIDAILAKAQVSEKAVGFNELMNQQPA" FT misc_feature 907133..907567 FT /gene="tig" FT /locus_tag="VSAL_I0817" FT /note="HMMPfam hit to PF05697, Bacterial trigger factor FT protein (TF), score 1.2e-63" FT /inference="protein motif:HMMPfam:PF05697" FT misc_feature 907586..907846 FT /gene="tig" FT /locus_tag="VSAL_I0817" FT /note="HMMPfam hit to PF00254, FKBP-type peptidyl-prolyl FT cis-trans isomera, score 2.3e-25" FT /inference="protein motif:HMMPfam:PF00254" FT misc_feature 907847..908353 FT /gene="tig" FT /locus_tag="VSAL_I0817" FT /note="HMMPfam hit to PF05698, Bacterial trigger factor FT protein (TF) C-ter, score 1.5e-54" FT /inference="protein motif:HMMPfam:PF05698" FT CDS 908532..909155 FT /transl_table=11 FT /gene="clpP" FT /locus_tag="VSAL_I0818" FT /old_locus_tag="TVS0675" FT /product="ATP-dependent Clp protease proteolytic subunit" FT /EC_number="3.4.21.92" FT /db_xref="GOA:B6EHK3" FT /db_xref="InterPro:IPR001907" FT /db_xref="InterPro:IPR018215" FT /db_xref="InterPro:IPR023562" FT /db_xref="UniProtKB/Swiss-Prot:B6EHK3" FT /protein_id="CAQ78503.1" FT /translation="MSYQENNAMPSIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFL FT TGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTV FT CMGQACSMGAFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKKKL FT NTLLAEHTGQPLEVIEKDTDRDNFMAADDAVKYGLVDAVLNKRD" FT misc_feature 908604..909149 FT /gene="clpP" FT /locus_tag="VSAL_I0818" FT /note="HMMPfam hit to PF00574, Clp protease, score FT 2.2e-137" FT /inference="protein motif:HMMPfam:PF00574" FT misc_feature 908838..908873 FT /gene="clpP" FT /locus_tag="VSAL_I0818" FT /note="PS00381 Endopeptidase Clp serine active site." FT /inference="protein motif:ProSite:PS00381" FT misc_feature 908904..908945 FT /gene="clpP" FT /locus_tag="VSAL_I0818" FT /note="PS00382 Endopeptidase Clp histidine active site." FT /inference="protein motif:ProSite:PS00382" FT CDS join(909242..910294,911633..911866) FT /pseudo FT /transl_table=11 FT /gene="clpX" FT /locus_tag="VSAL_I0819" FT /old_locus_tag="TVS0676" FT /product="ATP-dependent Clp protease ATP-binding subunit FT ClpX (pseudogene)" FT /note="Similar to Escherichia coli ATP-dependent Clp FT protease atp-binding subunit ClpX UniProt:P0A6H1 (423 aa) FT fasta scores: E()=1.2e-92, 80.046% id in 436 aa. CDS is FT disrupted by the insertion of an IS element after codon FT 351" FT /db_xref="PSEUDO:CAQ78504.1" FT /inference="similar to sequence:UniProt:P0A6H1" FT misc_feature 909278..909397 FT /gene="clpX" FT /locus_tag="VSAL_I0819" FT /note="HMMPfam hit to PF06689, ClpX C4-type zinc FT finger,score 6.9e-26" FT /inference="protein motif:HMMPfam:PF06689" FT misc_feature 909581..910186 FT /gene="clpX" FT /locus_tag="VSAL_I0819" FT /note="HMMPfam hit to PF07724, ATPase family associated FT with various cell, score 1e-78" FT /inference="protein motif:HMMPfam:PF07724" FT misc_feature order(909593..910294,911633..911668) FT /gene="clpX" FT /locus_tag="VSAL_I0819" FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cell, score 8.1e-06" FT /inference="protein motif:HMMPfam:PF00004" FT misc_feature 909608..909631 FT /gene="clpX" FT /locus_tag="VSAL_I0819" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT repeat_region 910297..911625 FT /note="VSa5" FT repeat_region 910297..910318 FT /note="IR of VSa5" FT misc_RNA complement(910342..910411) FT /locus_tag="VSAL_I3156s" FT /product="anti-sense RNA (RNA-OUT)" FT /note="anti-sense RNA (RNA-OUT) (RF00240) predicted by FT Rfam, score 57.49" FT CDS 910404..911612 FT /transl_table=11 FT /gene="tnpR" FT /locus_tag="VSAL_I0820" FT /old_locus_tag="TVS0677" FT /product="transposase" FT /db_xref="GOA:B6EHK5" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR014736" FT /db_xref="UniProtKB/TrEMBL:B6EHK5" FT /protein_id="CAQ78505.1" FT /translation="MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELG FT RNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQ FT KRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAG FT FKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKRLTKS FT NPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWVLATNLPVEIRTPKQL FT VNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQ FT KQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNLFTHGYAL FT GKL" FT misc_feature 910680..911396 FT /gene="tnpR" FT /locus_tag="VSAL_I0820" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 2.3e-39" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 911604..911625 FT /note="IR of VSa5" FT CDS 912000..914363 FT /transl_table=11 FT /gene="lon" FT /locus_tag="VSAL_I0821" FT /old_locus_tag="TVS0678" FT /product="ATP-dependent protease LA" FT /EC_number="3.4.21.53" FT /db_xref="GOA:B6EHK6" FT /db_xref="InterPro:IPR003111" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR004815" FT /db_xref="InterPro:IPR008269" FT /db_xref="InterPro:IPR015947" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:B6EHK6" FT /protein_id="CAQ78506.1" FT /translation="MNLERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAME FT QNKQVLLVAQKEAAKEEPQLDDLHSVGTIATILQLLKLPDGTVKVLVEGQQRAKIHQFL FT EADFFTADAEFLVTPEIDDAEQEVIMRSAINQFDGFIKLNKKIPPEVLTSLSGIEDAAR FT LADTIAAHMPLKLADKQEVLELIDVIARLEFLMGMMESEIDLLQIEKRIRGRVKKQMEK FT SQREYYLNEQMKAIQKELGDLDDAPDEFEALQKKIADAKMPKEAQEKAEQELQKLKMMS FT PMSAEATVVRSYIDCMVGVPWFKRSKVKKDLAKAEDILNADHYGLERVKERILEYLAVQ FT SRVTKLKGPILCLVGPPGVGKTSLGQSIARATGRKYTRMALGGVRDEAEIRGHRRTYIG FT SLPGKLIQKMSKVEVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSTFSDHYLEV FT DYDLSDVMFVATSNSMNIPGPLLDRMEVIRLSGYTEDEKLNIAKNHLLMKQVKRNGLKE FT DEIQIDDSAIMGIIRYYTREAGVRSLEREISKLCRKAVKQILLDKSIKKVTINQDNLKD FT FLGVQRCDYGKADTENRVGQVVGLAWTEVGGDLLTIEAESMIGKGKLAYTGSLGDVMKE FT SIQAAMTVVRTRAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGVGMCTALVSSLTGN FT PVRSDVAMTGEITLRGEVLPIGGLKEKLLAAHRGGIKTVIIPKDNERDLEEIPANVIAD FT LSVHPVKWIDEVLTLALQNDPQGFSLESSQKSDV" FT misc_feature 912027..912602 FT /gene="lon" FT /locus_tag="VSAL_I0821" FT /note="HMMPfam hit to PF02190, ATP-dependent protease La FT (LON) domain, score 7.1e-52" FT /inference="protein motif:HMMPfam:PF02190" FT misc_feature 913047..913631 FT /gene="lon" FT /locus_tag="VSAL_I0821" FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellul, score 2e-41" FT /inference="protein motif:HMMPfam:PF00004" FT misc_feature 913047..913475 FT /gene="lon" FT /locus_tag="VSAL_I0821" FT /note="HMMPfam hit to PF07728, ATPase family associated FT with various cellul, score 2.8e-05" FT /inference="protein motif:HMMPfam:PF07728" FT misc_feature 913062..913085 FT /gene="lon" FT /locus_tag="VSAL_I0821" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 913701..914315 FT /gene="lon" FT /locus_tag="VSAL_I0821" FT /note="HMMPfam hit to PF05362, Lon protease (S16) FT C-terminal proteolytic do, score 1.3e-152" FT /inference="protein motif:HMMPfam:PF05362" FT CDS 914503..914799 FT /transl_table=11 FT /gene="hupB" FT /locus_tag="VSAL_I0822" FT /old_locus_tag="TVS0679" FT /product="DNA-binding protein HU-beta" FT /note="Possible alternative translational start site after FT codon 8" FT /db_xref="GOA:B6EHK7" FT /db_xref="InterPro:IPR000119" FT /db_xref="InterPro:IPR010992" FT /db_xref="InterPro:IPR020816" FT /db_xref="InterPro:IPR023630" FT /db_xref="UniProtKB/TrEMBL:B6EHK7" FT /protein_id="CAQ78507.1" FT /translation="MNNLKGNTVNKSQLVDQIAENADISKAAAGRALDALVETVTETLK FT SGDQVTLVGFGSFIVRERAARTGRNPKTGEAIEISAAKVPAFKAGKALKDACN" FT misc_feature 914527..914796 FT /gene="hupB" FT /locus_tag="VSAL_I0822" FT /note="HMMPfam hit to PF00216, Bacterial DNA-binding FT protein, score 1.9e-51" FT /inference="protein motif:HMMPfam:PF00216" FT misc_feature 914662..914721 FT /gene="hupB" FT /locus_tag="VSAL_I0822" FT /note="PS00045 Bacterial histone-like DNA-binding proteins FT signature." FT /inference="protein motif:ProSite:PS00045" FT CDS 915001..916857 FT /transl_table=11 FT /locus_tag="VSAL_I0823" FT /old_locus_tag="TVS0680" FT /product="peptidyl-prolyl cis-trans isomerase D" FT /EC_number="5.2.1.8" FT /db_xref="GOA:B6EHK8" FT /db_xref="InterPro:IPR000297" FT /db_xref="InterPro:IPR008880" FT /db_xref="InterPro:IPR015391" FT /db_xref="InterPro:IPR023058" FT /db_xref="UniProtKB/TrEMBL:B6EHK8" FT /protein_id="CAQ78508.1" FT /translation="MMDRIREGSTGLVVKIILGLIIFSFVFAGVGSYLVGGSQPLAAKV FT GEREITRNDFEQVYQNERNRMQSQLGEYFSTLLGDPAYVEQFRKSVLDRMVNDALLDNQ FT AQELGLRVSDEQIRQAILSMPQFQKDGKFDEEIFNVSLRRAGFTSDSFAEYLRGDLVRN FT QLVSALESTEFTLSNEVKAQGELEGQQREIRTITLDTATFAKNAKVTEEEVKEYYDANK FT QQFVRPEQVKVSYIELSGESLKAQAPITDEEIQTYYNENQDKYSTQEKREVSHILIKGD FT EADAQAVLARLDAGEDFATVAKEDSQDIPTAKEGGSLGWIERGVIDPEFEDAAFQLVNV FT GDHSGLVKSAFGYHIIQLDAIEAPKTKPLAKVSADIKAFLVDEHAADAFYSMQTELAEK FT AFESPDSLDDAAEAVNAKVITSDFFSQADAPALLANSDVLQAIYSAEVKEDGLNSDVIE FT IAPEHVVVVRVEESRDEMVLPLEEVKASVITRLSQAKGEQKALELAKNIITALNKDDDA FT YLSEQGLVFTEARMITRADELANDVYRLQKPTADKPTYAQVMDRQGNNVIVALDDVLEL FT DNSAMAEQVSTRLLRTQTQQDLTATLDTLKSNTEISYPLLEQ" FT misc_feature 915034..915102 FT /locus_tag="VSAL_I0823" FT misc_feature 915823..916080 FT /locus_tag="VSAL_I0823" FT /note="HMMPfam hit to PF00639, PPIC-type PPIASE FT domain,score 2.5e-30" FT /inference="protein motif:HMMPfam:PF00639" FT misc_feature 915892..915957 FT /locus_tag="VSAL_I0823" FT /note="PS01096 PpiC-type peptidyl-prolyl cis-trans FT isomerase signature." FT /inference="protein motif:ProSite:PS01096" FT CDS 917063..917359 FT /transl_table=11 FT /locus_tag="VSAL_I0824" FT /old_locus_tag="TVS0681" FT /product="putative exported protein" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EHK9" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR004509" FT /db_xref="UniProtKB/TrEMBL:B6EHK9" FT /protein_id="CAQ78509.1" FT /translation="MSVFINTLLLSFCLFTSGVISASEKAIDKHEGIEIVVNINKADIE FT ELDTLLIGVGESKAQAIIDYRNENGKFTTINELANVKGIGEKLIEKNKNRIKL" FT sig_peptide 917063..917128 FT /locus_tag="VSAL_I0824" FT CDS complement(917450..918805) FT /transl_table=11 FT /locus_tag="VSAL_I0825" FT /old_locus_tag="TVS0682" FT /product="di-/tripeptide transporter" FT /db_xref="GOA:B6EHL0" FT /db_xref="InterPro:IPR005279" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR018456" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:B6EHL0" FT /protein_id="CAQ78510.1" FT /translation="MPNNNKLLMGHPQGLFLLFGTELWERFSYYAMRAILVLYLTDRTI FT NGGLGWTVKDALSLYGTYTALMYITPLIGGWLADNYLGQRKSLLIGGFLMVIGQFTLAL FT PHNTLPLSVETLFYVGLGFLIAGNGLFKPNVSTMVGDLYQNGDHRRDGAFTIFYMGINL FT GSLLAGVVSGSVTGIWGWKAGFAAAGIGMIISLIIQTFFAQRFLGDIGVRPAAHIAKER FT AEAKGTSHHVLSKVETDRLKVIMVMGLFVIVFWAGFEQAGGLMNIYSQQYTDRMIGSFE FT VPAAWFQSLNPFFIITLAPLIAILWIKLGPKEPSSPIKFALALFFLAIGFLCMVGAVMQ FT QGGDLTIKTSMYWLVGAYFFHTLGELCLSPIGLSLVTKLAPLRLASLMMGTWFGFNAIS FT NYIAGVVGSHVESLGALDIFAGIAISATISGILLLMISGTLIRWMHGAEKAH" FT misc_feature complement(order(917486..917554,917597..917665, FT 917678..917746,917789..917848,917885..917953, FT 918011..918079,918197..918256,918284..918352, FT 918413..918481,918494..918547,918572..918640)) FT /locus_tag="VSAL_I0825" FT misc_feature complement(917570..918754) FT /locus_tag="VSAL_I0825" FT /note="HMMPfam hit to PF07690, Major Facilitator FT Superfamily, score 1.5e-17" FT /inference="protein motif:HMMPfam:PF07690" FT misc_feature complement(917606..918553) FT /locus_tag="VSAL_I0825" FT /note="HMMPfam hit to PF00854, POT family, score 4.5e-32" FT /inference="protein motif:HMMPfam:PF00854" FT misc_feature complement(918308..918346) FT /locus_tag="VSAL_I0825" FT /note="PS01023 PTR2 family proton/oligopeptide symporters FT signature 2." FT /inference="protein motif:ProSite:PS01023" FT CDS 919200..919697 FT /transl_table=11 FT /gene="rfaH" FT /locus_tag="VSAL_I0826" FT /old_locus_tag="TVS0683" FT /product="transcriptional activator RfaH" FT /db_xref="GOA:B6EHL1" FT /db_xref="InterPro:IPR006645" FT /db_xref="InterPro:IPR010215" FT /db_xref="UniProtKB/TrEMBL:B6EHL1" FT /protein_id="CAQ78511.1" FT /translation="MKLWYLLYCKRGDQQRAKLHLENQNVECFYPEIDVEKMIRGKRTT FT VKEPLFPCYMFVRFDFTVGPTFTTIRSTRGISDFVRFGSQPTVLNGDLIYSLKQLGENL FT HHKKTIECLPESGQKVDIIEGPYTGIDAIYKEADGEMRSILLITLINKKVEIKIENINV FT GF" FT misc_feature 919203..919475 FT /gene="rfaH" FT /locus_tag="VSAL_I0826" FT /note="HMMPfam hit to PF02357, Transcription termination FT factor nusG, score 3.7e-27" FT /inference="protein motif:HMMPfam:PF02357" FT CDS complement(919744..921411) FT /transl_table=11 FT /gene="asnB" FT /locus_tag="VSAL_I0827" FT /old_locus_tag="TVS0684" FT /product="asparagine synthetase B" FT /EC_number="6.3.5.4" FT /db_xref="GOA:B6EHL2" FT /db_xref="InterPro:IPR001962" FT /db_xref="InterPro:IPR006426" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR017932" FT /db_xref="UniProtKB/TrEMBL:B6EHL2" FT /protein_id="CAQ78512.1" FT /translation="MCSIFGILDIKSDPTPLRKVALEMSKKLRHRGPDWSGIYSSDKAI FT LAHERLAIVGLNSGAQPLYSKDKQHILAVNGEIYNHKELRAKYADDYDFQTDSDCEVIL FT ALYRDKGADLLEDLNGIFAFILYDEEKDEYLIGRDHIGIIPMYHGYDEHGNYYIASEMK FT ALVPVCKSMSEFPPGHFYSSKDAEPTRYYVRDWMEYDAVKDNPTSKDDLKQALEDAVKR FT QLMTDVPYGVLLSGGLDSSITSAVAKKFAAMRIEDNEKSEAWWPQLHSFAVGLEGAPDL FT KAAREVANQIGTVHHEMTYTIQEGLDAIRDVIYHIETYDVTTIRASTPMYLLGRKIKAM FT GIKMVLSGEGADEIFGGYLYFHKAPNKKEFHEETVRKLLALNMFDCARANKSLAAWGVE FT GRVPFLDKEFIDVAMRLNPQDKMCGNGKMEKHILRECFEDDLPEAIAWRQKEQFSDGVG FT YGWIDSLRETAEVKVTDQQMESAKFRFPYNTPLTKEAYVYREIFEELFPLEDAAKCVPG FT GPSIACSSAKAIEWDESFKNCADPSGRAVQAIHNEAYS" FT misc_feature complement(920062..920781) FT /gene="asnB" FT /locus_tag="VSAL_I0827" FT /note="HMMPfam hit to PF00733, Asparagine synthase, score FT 8e-104" FT /inference="protein motif:HMMPfam:PF00733" FT misc_feature complement(920926..921408) FT /gene="asnB" FT /locus_tag="VSAL_I0827" FT /note="HMMPfam hit to PF00310, Glutamine amidotransferases FT class-II, score 1.7e-25" FT /inference="protein motif:HMMPfam:PF00310" FT CDS complement(921693..923276) FT /transl_table=11 FT /locus_tag="VSAL_I0828" FT /old_locus_tag="TVS0685" FT /product="sodium/hydrogen antiporter" FT /db_xref="GOA:B6EHL3" FT /db_xref="InterPro:IPR003148" FT /db_xref="InterPro:IPR006153" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EHL3" FT /protein_id="CAQ78513.1" FT /translation="MELLFIIAAFVMGFIALKINLPPLVGFLLAGFGLHAFGFQSNDTL FT STFADLGVTLLLFSIGLKLDIKTLLAKEIWLGATLHNVFSTLFFTLALLGLKLLGITML FT ANIEIAQLVLFGFALSFSSTVFAVKALQEKGEMNATYGTLAIGILVMQDIFAVVFLSVS FT TGKTPEITALALFALPLFRPLFFKLLDWAGHGEMLVLYGIFLALVAGAGTFELVGMKPD FT LGALILGMLLAGHSKASELSKSLFNLKEILLICFFLNIGLSAAPTLSGLTLALLLVLLL FT PVKGFLYFIIINKFKFRVRTSLLASLTLFNYSEFGLIVGGLAFKMGWLPGDTLVAIAIA FT VSISFIISAPLNNFGHSIYQRSRHWLKEHTAEKLNSMDKLINPGRAQILILGMGSIGSG FT AYDELKDKYGDIILGIELKDDAAKHHQELRRNVITGDATDPDFWERILSTSHVKLVLLA FT MPNHQGNQFALEQLKSRNYKGQTAAIAAYNDQIDGLVEQGVDAAFNIYNEAGNGFARHV FT TEQLNPKFNQ" FT misc_feature complement(921762..922115) FT /locus_tag="VSAL_I0828" FT /note="HMMPfam hit to PF02254, TrkA-N domain, score FT 4.4e-19" FT /inference="protein motif:HMMPfam:PF02254" FT misc_feature complement(order(922209..922277,922305..922373, FT 922407..922475,922620..922688,922701..922769, FT 922797..922865,922884..922952,922962..923030, FT 923091..923147,923190..923258)) FT /locus_tag="VSAL_I0828" FT misc_feature complement(922218..923270) FT /locus_tag="VSAL_I0828" FT /note="HMMPfam hit to PF00999, Sodium/hydrogen exchanger FT family, score 3.7e-57" FT /inference="protein motif:HMMPfam:PF00999" FT CDS complement(923355..924569) FT /transl_table=11 FT /gene="nagC" FT /locus_tag="VSAL_I0829" FT /old_locus_tag="TVS0686" FT /product="N-acetylglucosamine repressor" FT /db_xref="GOA:B6EHL4" FT /db_xref="InterPro:IPR000600" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EHL4" FT /protein_id="CAQ78514.1" FT /translation="MTDGQIGNVDLVKQLNSAAVYRLIDQKGPISRIQIADVSQLAPAS FT VTKITRQLLERGLIKEVAQQASTGGRRAISLTTETSPFHSIAVRLGRDYIQLSLFDLST FT KELASEYQEFHYSNQEHLLDGLNKLLQNFITRNQDTIKQLIAIGITLPGLVNPETGVVE FT YMPNTDIDKLALADFIKETFDIQCFVGNDIRGLALAEHYFGASQDCRDSILVSVHRGTG FT AGIIVNGKVFLGHNRNVGEIGHIQIDPIGDKCQCGNFGCLETVAANPAIISRIETLLEQ FT GYPSSLSQLETITMSDICHAANHGDELAIQTLLRVGNQLGKAIAMTVNLFNPQKIVIAG FT AITQADKIVFAAIQNCIKNQSLTAFHKNLPVVASQLDNQPTIGAFSMVKRAMLNGVLLQ FT KLLDE" FT misc_feature complement(923757..924311) FT /gene="nagC" FT /locus_tag="VSAL_I0829" FT /note="HMMPfam hit to PF00480, ROK family, score 1.5e-61" FT /inference="protein motif:HMMPfam:PF00480" FT misc_feature complement(923838..923921) FT /gene="nagC" FT /locus_tag="VSAL_I0829" FT /note="PS01125 ROK family signature." FT /inference="protein motif:ProSite:PS01125" FT CDS complement(924571..925707) FT /transl_table=11 FT /gene="nagA" FT /locus_tag="VSAL_I0830" FT /old_locus_tag="TVS0687" FT /product="N-acetylglucosamine-6-phosphate deacetylase" FT /EC_number="3.5.1.25" FT /db_xref="GOA:B6EHL5" FT /db_xref="InterPro:IPR003764" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="UniProtKB/TrEMBL:B6EHL5" FT /protein_id="CAQ78515.1" FT /translation="MYALTNCKVYTGNDVLVDHSVIINGTNIEKICLTSELPDGIERKD FT LDGANLSPGFIDLQLNGCGGVMLNDEITAKTMQIMHEANLKSGCTSFLPTLITSSDEDM FT RASIEAAREYHNKYQNQSLGLHLEGPYLNVMKKGIHSVDHIRHSDSDMIQLMCDNADLI FT TKVTLAPEQNDPEHIERLHKAGIVVSIGHTNATYAEARQGFESGITFATHLFNAMTPMV FT GREPGVVGAIYDTPDVYAGIIADGFHVDYANIRIAHKIKKEKLVLVTDATAPAGADMEY FT FIFVGKKVYYKDGKCVDENGTLGGSALTMIEAVQNTVEHVGIALDEALRMATLYPAQAI FT GVDNKLGRIKKDMVANLAIFDRDFNVKATVVNGQYEQS" FT misc_feature complement(924625..925560) FT /gene="nagA" FT /locus_tag="VSAL_I0830" FT /note="HMMPfam hit to PF01979, Amidohydrolase family,score FT 5.6e-24" FT /inference="protein motif:HMMPfam:PF01979" FT CDS 926109..927599 FT /transl_table=11 FT /gene="nagE" FT /locus_tag="VSAL_I0831" FT /old_locus_tag="TVS0688" FT /product="PTS permease for N-acetylglucosamine and glucose" FT /EC_number="2.7.1.69" FT /db_xref="GOA:B6EHL6" FT /db_xref="InterPro:IPR001996" FT /db_xref="InterPro:IPR003352" FT /db_xref="InterPro:IPR010974" FT /db_xref="InterPro:IPR011535" FT /db_xref="InterPro:IPR013013" FT /db_xref="InterPro:IPR018113" FT /db_xref="UniProtKB/TrEMBL:B6EHL6" FT /protein_id="CAQ78516.1" FT /translation="MNILGKFQKVGKALMVPVATLPAAAILMGIGYWIDPVAWGGNSAL FT AAFLIKAGASIIDNMSVLFAIGVAYGMSKDKDGAAALSGFVGFLVVTNLLSPGAVAQIQ FT GIDPAAVPAAFSKINNQFVGILVGIISAEIYNRFSAVELHKTLAFFSGKRLVPILTSFA FT GILIAFVLMYVWPAIYDGLVHFGESIQGMGATGAGIYAFFNRLLIPVGLHHALNSVFWF FT DVAGINDIPNFLGGAKSIAEGTATVGVTGMYQAGFFPIMMFGLPGAALAIYHTAKVENK FT EKVASIMIAAGFASFFTGVTEPLEFSFMFLAPALYVVHAALTGISVFIAASMHWIAGFG FT FSAGLVDMVLSSRNPLAVNWYMLIIQGIVFFALYYFIFRAVILKFNLKTPGREDDDEEE FT SSIRGSKETGELAKQYLKALGGHDNIENIDACITRLRLTLRDTSVISEKQLKGLGAMGV FT VKLGSNNVQVILGPLTEIVAGEMKKIPASEDLTAVALP" FT sig_peptide 926109..926270 FT /gene="nagE" FT /locus_tag="VSAL_I0831" FT misc_feature 926139..927080 FT /gene="nagE" FT /locus_tag="VSAL_I0831" FT /note="HMMPfam hit to PF02378, Phosphotransferase FT system,EIIC, score 9.1e-90" FT /inference="protein motif:HMMPfam:PF02378" FT misc_feature order(926145..926210,926238..926306,926343..926411, FT 926469..926537,926571..926639,926856..926924, FT 926958..927026,927069..927137,927174..927242) FT /gene="nagE" FT /locus_tag="VSAL_I0831" FT misc_feature 927342..927446 FT /gene="nagE" FT /locus_tag="VSAL_I0831" FT /note="HMMPfam hit to PF00367, phosphotransferase FT system,EIIB, score 4.5e-15" FT /inference="protein motif:HMMPfam:PF00367" FT misc_feature 927378..927431 FT /gene="nagE" FT /locus_tag="VSAL_I0831" FT /note="PS01035 PTS EIIB domains cysteine phosphorylation FT site signature." FT /inference="protein motif:ProSite:PS01035" FT CDS 927768..929426 FT /transl_table=11 FT /gene="glnS" FT /locus_tag="VSAL_I0832" FT /old_locus_tag="TVS0689" FT /product="glutaminyl-tRNA synthetase" FT /EC_number="6.1.1.18" FT /db_xref="GOA:B6EHL7" FT /db_xref="InterPro:IPR000924" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR004514" FT /db_xref="InterPro:IPR011035" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR020056" FT /db_xref="InterPro:IPR020058" FT /db_xref="InterPro:IPR020059" FT /db_xref="InterPro:IPR020061" FT /db_xref="InterPro:IPR022861" FT /db_xref="UniProtKB/Swiss-Prot:B6EHL7" FT /protein_id="CAQ78517.1" FT /translation="MSETETRPTNFIRQIIDEDLKSGKHSSVHTRFPPEPNGYLHIGHA FT KSICLNFGIAQDYQGQCNLRFDDTNPEKEDIEYVESIKNDVKWLGFDWSGDIHYSSNYF FT DKLYDYAVELIEKGLAYVDELTSDQIREYRGSLKEPGKNSPYRDRSVEENLALFEQMRD FT GKFKEGTICLRAKIDMASSFIVMRDPVIYRIRFATHHQTGDKWCIYPMYDFTHCISDAL FT EGITHSICTLEFQDNRRLYDWVLENITIDCQPHQYEFSRLNLEYTIMSKRKLNELVTEK FT LVNGWDDPRMPTVSGLRRRGFTAGSIREFCKRIGVTKQENMIEFGSLESCIRDDLNENA FT PRAMAVLEPVKVVIENYEEGKVETLNVANHPNKPEMGTREVPFTREIYIEQDDFREEAN FT KKYKRLVLGKEVRLRGAYVIQANRIEKDEAGNITTIFCSYDTETLGKNPADGRKVKGVI FT HWVSADKAFPAEIRLYDRLFTVPNSAALEDFSESINPESLITKQGFVEPSLVTAEAEAG FT YQFERTGYFCIDNKDSTPEALVFNRTVGLRDTWEG" FT misc_feature 927846..928781 FT /gene="glnS" FT /locus_tag="VSAL_I0832" FT /note="HMMPfam hit to PF00749, tRNA synthetases class I (E FT and Q), ca, score 3.2e-178" FT /inference="protein motif:HMMPfam:PF00749" FT misc_feature 927867..927902 FT /gene="glnS" FT /locus_tag="VSAL_I0832" FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT /inference="protein motif:ProSite:PS00178" FT misc_feature 928785..929354 FT /gene="glnS" FT /locus_tag="VSAL_I0832" FT /note="HMMPfam hit to PF03950, tRNA synthetases class I (E FT and Q), an, score 1.2e-97" FT /inference="protein motif:HMMPfam:PF03950" FT CDS complement(929500..929943) FT /transl_table=11 FT /gene="fur" FT /locus_tag="VSAL_I0833" FT /old_locus_tag="TVS0690" FT /product="ferric uptake regulator protein" FT /db_xref="GOA:B6EHL8" FT /db_xref="InterPro:IPR002481" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EHL8" FT /protein_id="CAQ78518.1" FT /translation="MSDNNQALKKAGLKVTLPRLKILEILQQPESQHISAEDLYKKLID FT IGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELATQHHHDHLVCLDCGKVIEFSD FT DLIEERQKDIANKYNVRLTNHSLYLYGHCITGDCIENTTAHNG" FT misc_feature complement(929554..929916) FT /gene="fur" FT /locus_tag="VSAL_I0833" FT /note="HMMPfam hit to PF01475, Ferric uptake regulator FT family, score 3.4e-69" FT /inference="protein motif:HMMPfam:PF01475" FT CDS 930125..930589 FT /transl_table=11 FT /locus_tag="VSAL_I0834" FT /old_locus_tag="TVS0691" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EHL9" FT /protein_id="CAQ78519.1" FT /translation="MYRYFTPKIVRWALNIWPPFWGAGISIKNISENFQDVRVVLKDRF FT WNRNANRTQYGGSIFSMTDPVFSLMLMGIFREEYFVWDKKAEIDFISPGTSNLEAHFVI FT SDEKIKEIKQLTENGNKCFPEFEVYIYDKNGKVVARVNRTLYVRKKPQFR" FT CDS complement(930627..931154) FT /transl_table=11 FT /gene="fldA" FT /locus_tag="VSAL_I0835" FT /old_locus_tag="TVS0692" FT /product="flavodoxin 1" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EHM0" FT /db_xref="InterPro:IPR008254" FT /db_xref="InterPro:IPR010086" FT /db_xref="UniProtKB/TrEMBL:B6EHM0" FT /protein_id="CAQ78520.1" FT /translation="MASVGLFFGSDTGNTEAIGKMIQKQLGKKLVHVQDIAKSSKEDID FT NFDLLLLGIPTWYYGEAQCDWDDFFPELEGIDFSTKLVAIFGCGDQEDYAEYFCDAMGN FT IRDIVEAKGGTVIGYWPTEGYEFEASKALVDENNFVGLCIDEDRQPELTEERVTAWVKQ FT IHEEMCLAELED" FT misc_feature complement(930675..931139) FT /gene="fldA" FT /locus_tag="VSAL_I0835" FT /note="HMMPfam hit to PF00258, Flavodoxin, score 4.1e-50" FT /inference="protein motif:HMMPfam:PF00258" FT CDS complement(931214..931435) FT /transl_table=11 FT /locus_tag="VSAL_I0836" FT /old_locus_tag="TVS0693" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR021249" FT /db_xref="UniProtKB/TrEMBL:B6EHM1" FT /protein_id="CAQ78521.1" FT /translation="MLYEHFDLIESIGLDLLFASIFFFIGMAIKDVLKQGNVPSFGRRI FT VWLVLFLGCTGFIAKGLIQLSWEGAGLG" FT misc_feature complement(order(931235..931303,931337..931405)) FT /locus_tag="VSAL_I0836" FT CDS complement(931522..932298) FT /transl_table=11 FT /locus_tag="VSAL_I0837" FT /old_locus_tag="TVS0694" FT /product="putative esterase" FT /EC_number="3.1.-.-" FT /note="Expression may be stress-induced" FT /db_xref="GOA:B6EHM2" FT /db_xref="InterPro:IPR000073" FT /db_xref="InterPro:IPR000639" FT /db_xref="UniProtKB/TrEMBL:B6EHM2" FT /protein_id="CAQ78522.1" FT /translation="MKRLNYKQQGNGDPLILIHGLFGSLDNLGLIARQFESSYQVISVD FT LRNHGLSFHSNEHNYDLLATDVIELMDHLSITSAHIIGHSMGGKVAMAIAGSSPEKINS FT LSILDMAPVSYSERKHDAVFTGLQRVITTPPTSRKEADVLLSTSIIDPGVRQFLSKSLH FT KINNTLTFRFNVSTLFNQYSDIIGWHDITPFSGHVLFIKGENSDYILPGHRASIMAQFP FT TAKAHVVNGTGHWLHAEKPETIYRIINRFIENSRKR" FT misc_feature complement(931549..932184) FT /locus_tag="VSAL_I0837" FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase FT fold,score 1.4e-15" FT /inference="protein motif:HMMPfam:PF00561" FT misc_feature complement(931753..932274) FT /locus_tag="VSAL_I0837" FT /note="HMMPfam hit to PF07819, PGAP1-like protein, score FT 2.7e-11" FT /inference="protein motif:HMMPfam:PF07819" FT CDS 932392..932934 FT /transl_table=11 FT /gene="seqA" FT /locus_tag="VSAL_I0838" FT /old_locus_tag="TVS0695" FT /product="protein SeqA (negative regulator of replication FT initiation)" FT /db_xref="GOA:B6EHM3" FT /db_xref="InterPro:IPR005621" FT /db_xref="InterPro:IPR010985" FT /db_xref="UniProtKB/TrEMBL:B6EHM3" FT /protein_id="CAQ78523.1" FT /translation="MKTIEVDEELYRFIASQTQHIGESASDILRRILMQSSATELVVTA FT PSAVIKRGIVVSKDAGKESSVDRVKAVRTLLISDEFSSLDKAIDRFLTVLSELYTIDSK FT AFSEATEVKGRTRVYFADNQDTLIASGKTTKPREIKGTPFWVITNTNTNRKRHMVELLM FT ERMGFQHDLTEKVCAAI" FT misc_feature 932392..932931 FT /gene="seqA" FT /locus_tag="VSAL_I0838" FT /note="HMMPfam hit to PF03925, SeqA protein, score 8.4e-94" FT /inference="protein motif:HMMPfam:PF03925" FT CDS 932983..934629 FT /transl_table=11 FT /gene="pgm" FT /locus_tag="VSAL_I0839" FT /old_locus_tag="TVS0696" FT /product="phosphoglucomutase" FT /EC_number="5.4.2.2" FT /db_xref="GOA:B6EHM4" FT /db_xref="InterPro:IPR005843" FT /db_xref="InterPro:IPR005844" FT /db_xref="InterPro:IPR005845" FT /db_xref="InterPro:IPR005846" FT /db_xref="InterPro:IPR005852" FT /db_xref="InterPro:IPR016055" FT /db_xref="InterPro:IPR016066" FT /db_xref="UniProtKB/TrEMBL:B6EHM4" FT /protein_id="CAQ78524.1" FT /translation="MAIHPRAGQKAQQEDLHNIPVLVANYFLLEPNPANADQKVQFGTS FT GHRGTADKSTFNQHHIWAIAQAVVDVRKANGVTGPLFLGKDTHALSEPAFTSAIEVFVA FT NGVEVIIQENNGYTPTPGISHAILTHNVKFDEKADGIVITPSHNPPQDGGIKYNPVHGG FT PAEGELTTAIENRANQLIANELKEVKRVSITEAMASDLVKQIDLVQPYIDDLKNVINIE FT AIQKANLKLGVDPLGGSGIEYWRQIGQAFELDLTLVSEAIDPSFQFMSLDKDGVVRMDC FT SSPYAMAGLLSLKDDYDLAFGNDPDYDRHGIVTPSGLMNPNHYLAVCIDYLYQNRPQWK FT SEVAVGKTLVSSAIIDKVVADLGRDLCEVPVGFKWFVDGLYNGTLGFGGEESAGASFLR FT FDGTPWSTDKDGILLCLLAAEITAITGMNPQEYYNKLAAQHGESSYNRIQAVANKEQKA FT VLSKLSPEMVSATTLAGDEITARLTHAPGNGAAIGGLKVTTANGWFAARPSGTEEIYKI FT YCESFKGADHLALIEQEAQEIVSNVFKDAGL" FT misc_feature 933097..933534 FT /gene="pgm" FT /locus_tag="VSAL_I0839" FT /note="HMMPfam hit to FT PF02878,Phosphoglucomutase/phosphomannomutase, al, score FT 4.2e-41" FT /inference="protein motif:HMMPfam:PF02878" FT misc_feature 933400..933444 FT /gene="pgm" FT /locus_tag="VSAL_I0839" FT /note="PS00710 Phosphoglucomutase and phosphomannomutase FT phosphoserine signature." FT /inference="protein motif:ProSite:PS00710" FT misc_feature 933607..933939 FT /gene="pgm" FT /locus_tag="VSAL_I0839" FT /note="HMMPfam hit to FT PF02879,Phosphoglucomutase/phosphomannomutase, al, score FT 8.1e-14" FT /inference="protein motif:HMMPfam:PF02879" FT misc_feature 933940..934302 FT /gene="pgm" FT /locus_tag="VSAL_I0839" FT /note="HMMPfam hit to FT PF02880,Phosphoglucomutase/phosphomannomutase, al, score FT 2.2e-23" FT /inference="protein motif:HMMPfam:PF02880" FT misc_feature 934345..934614 FT /gene="pgm" FT /locus_tag="VSAL_I0839" FT /note="HMMPfam hit to FT PF00408,Phosphoglucomutase/phosphomannomutase, C-, score FT 1.5e-19" FT /inference="protein motif:HMMPfam:PF00408" FT CDS 934715..935470 FT /transl_table=11 FT /locus_tag="VSAL_I0840" FT /old_locus_tag="TVS0697" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR002678" FT /db_xref="UniProtKB/TrEMBL:B6EHM5" FT /protein_id="CAQ78525.1" FT /translation="MNNFQLETVLNNELKPQLIKDYCPNGLQVEGKNEVKKIITGVTAS FT QALIDAAIEYKADALLVHHGYFWKGENESIKGMKGNRIRSLIKNDINLFAYHLPLDIHP FT TLGNNAELARLFSIINVEGLEPTPQSIAMKGEFDVALSGEDLSLRISQILNREPLHITP FT DVNKNIKTVAWCSGGGQDYIELAAEQGIDAFISGEISERTTYIARELGIHYFAAGHHAT FT ERYGVKALGEWLVREHGFDVKFIDIDNPV" FT misc_feature 934742..935455 FT /locus_tag="VSAL_I0840" FT /note="HMMPfam hit to PF01784, NIF3 (NGG1p interacting FT factor 3), score 1.9e-111" FT /inference="protein motif:HMMPfam:PF01784" FT CDS complement(935590..936879) FT /transl_table=11 FT /gene="gltA" FT /locus_tag="VSAL_I0841" FT /old_locus_tag="TVS0698" FT /product="citrate synthase" FT /EC_number="2.3.3.1" FT /db_xref="GOA:B6EHU9" FT /db_xref="InterPro:IPR002020" FT /db_xref="InterPro:IPR010953" FT /db_xref="InterPro:IPR016141" FT /db_xref="InterPro:IPR016142" FT /db_xref="InterPro:IPR016143" FT /db_xref="InterPro:IPR019810" FT /db_xref="InterPro:IPR024176" FT /db_xref="UniProtKB/TrEMBL:B6EHU9" FT /protein_id="CAQ78526.1" FT /translation="MADKKATLHIEGQAPIDMPVMEGTIGPEVIDVRKLGANGYFTFDP FT GFLATASCESQITYIDGDKGVLLHRGFPIDQLANNADYLEVCYILLNGQAPSREEYETF FT KDIVTRHTMVHEQISSFFHGFRRDAHPMAVMCGVVGALAAFYHDSLDINNDEHREIAAF FT RLLSKMPTLSAMCYKYSIGQPFIYPRNDLTYAENFLHMMFANPCEEYEVNPVVARAMDK FT IFTLHADHEQNASTSTVRLAGSSGANPFACIAAGIASLWGPAHGGANEACLRMLEEIGS FT LDNIDEYVAKAKDKEDPFRLMGFGHRVYKNYDPRATVMREACHEVLKELNIKDPLLDVA FT MELERIALSDEYFVSKKLYPNVDFYSGIILKAIGIPASMFTVIFALSRTVGWIAHWSEM FT HSDPDNRIGRPRQLYTGEELREFKPLHERE" FT misc_feature complement(935650..936744) FT /gene="gltA" FT /locus_tag="VSAL_I0841" FT /note="HMMPfam hit to PF00285, Citrate synthase, score FT 9.9e-229" FT /inference="protein motif:HMMPfam:PF00285" FT misc_feature complement(935935..935973) FT /gene="gltA" FT /locus_tag="VSAL_I0841" FT /note="PS00480 Citrate synthase signature." FT /inference="protein motif:ProSite:PS00480" FT CDS 937266..937667 FT /transl_table=11 FT /gene="sdhC" FT /locus_tag="VSAL_I0842" FT /old_locus_tag="TVS0699" FT /product="succinate dehydrogenase cytochrome b556 subunit" FT /db_xref="GOA:B6EHV0" FT /db_xref="InterPro:IPR000701" FT /db_xref="InterPro:IPR014314" FT /db_xref="InterPro:IPR014361" FT /db_xref="InterPro:IPR018495" FT /db_xref="UniProtKB/TrEMBL:B6EHV0" FT /protein_id="CAQ78527.1" FT /translation="MELSEPLVKVKKSRPVNLDLQTIRFPITAIASILHRVSGVITFVS FT VGILLWLLNLSLSSPIGFAQAADHIDGFFVTFIMWGILTALAYHIVVGIRHLLMDMGHF FT EELESASQSAKIAFVITAVLSLLAGVLVW" FT misc_feature 937293..937643 FT /gene="sdhC" FT /locus_tag="VSAL_I0842" FT /note="HMMPfam hit to PF01127, Succinate dehydrogenase FT cytochrome b subunit, score 1.3e-43" FT /inference="protein motif:HMMPfam:PF01127" FT misc_feature 937305..937379 FT /gene="sdhC" FT /locus_tag="VSAL_I0842" FT /note="PS01000 Succinate dehydrogenase cytochrome b subunit FT signature 1." FT /inference="protein motif:ProSite:PS01000" FT misc_feature order(937362..937430,937473..937541,937602..937661) FT /gene="sdhC" FT /locus_tag="VSAL_I0842" FT misc_feature 937530..937571 FT /gene="sdhC" FT /locus_tag="VSAL_I0842" FT /note="PS01001 Succinate dehydrogenase cytochrome b subunit FT signature 2." FT /inference="protein motif:ProSite:PS01001" FT CDS 937661..938008 FT /transl_table=11 FT /gene="sdhD" FT /locus_tag="VSAL_I0843" FT /old_locus_tag="TVS0700" FT /product="succinate dehydrogenase hydrophobic membrane FT anchor protein" FT /db_xref="GOA:B6EHV1" FT /db_xref="InterPro:IPR000701" FT /db_xref="InterPro:IPR014312" FT /db_xref="UniProtKB/TrEMBL:B6EHV1" FT /protein_id="CAQ78528.1" FT /translation="MVANVSSLGRSGVHDFILIRASAIILTLYTLYIVGFCVFGPELTY FT MSWTNFFGGLFTKVFTMLALLSIIIHAWIGLWQVLTDYIKPVLLRALLQLGLVAVLLGY FT FFSGLIIVWGV" FT misc_feature order(937709..937777,937835..937903,937931..937999) FT /gene="sdhD" FT /locus_tag="VSAL_I0843" FT CDS 938005..939774 FT /transl_table=11 FT /transl_except=(pos:938005..938007,aa:Met) FT /gene="sdhA" FT /locus_tag="VSAL_I0844" FT /old_locus_tag="TVS0701" FT /product="succinate dehydrogenase flavoprotein subunit" FT /EC_number="1.3.99.1" FT /db_xref="GOA:B6EHV2" FT /db_xref="InterPro:IPR003952" FT /db_xref="InterPro:IPR003953" FT /db_xref="InterPro:IPR004112" FT /db_xref="InterPro:IPR011281" FT /db_xref="InterPro:IPR014006" FT /db_xref="InterPro:IPR015939" FT /db_xref="UniProtKB/TrEMBL:B6EHV2" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ78529.1" FT /translation="MVSIAVREFDAVVIGAGGAGMRAALQISEQGLSCALLSKVFPTRS FT HTVSAQGGITVALGNAHEDHWEQHMYDTVKGSDYIGDQDAIEYMCKNGPESVIELEKMG FT LPFSRFDDGTIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNIKHKTTIFS FT EWYALDLVKNEDGAILGCTALCMETGEICYFKSKATILATGGAGRIYASTTNAHINTGD FT GVGMAIRAGVPMQDIEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNA FT KDLAGRDVVARSMMVEIREGRGCDGPWGPHLKLKLDHLGKETLESRLPGVCELSRTFAH FT VDPVKEPIPVIPTCHYMMGGVPTQVSGQAIKQDPTGADVEIQGLFACGEIASVSVHGAN FT RLGGNSLLDLVVFGRATGLHLGETLKKQAEAKPATEADIEASLDRYNRWENSTGGEDPV FT QIRKDLQQCMQNNFSVFREGDAMAKGLEELKAIRERLKNAYLADKSTEFNTQRIECLEL FT ENLMETAFATAVAANYRTESRGAHARFDFPDRDDVNWLCHSVYNPETESMTKRGVNMEP FT IHREAFPPKARTY" FT misc_feature 938032..939222 FT /gene="sdhA" FT /locus_tag="VSAL_I0844" FT /note="HMMPfam hit to PF00890, FAD binding domain, score FT 3.4e-171" FT /inference="protein motif:HMMPfam:PF00890" FT misc_feature 938134..938163 FT /gene="sdhA" FT /locus_tag="VSAL_I0844" FT /note="PS00504 Fumarate reductase / succinate dehydrogenase FT FAD-binding site." FT /inference="protein motif:ProSite:PS00504" FT misc_feature 939385..939771 FT /gene="sdhA" FT /locus_tag="VSAL_I0844" FT /note="HMMPfam hit to PF02910, Fumarate reductase/succinate FT dehydroge, score 2.2e-66" FT /inference="protein motif:HMMPfam:PF02910" FT CDS 939789..940502 FT /transl_table=11 FT /gene="sdhB" FT /locus_tag="VSAL_I0845" FT /old_locus_tag="TVS0702" FT /product="succinate dehydrogenase iron-sulfur protein" FT /EC_number="1.3.99.1" FT /db_xref="GOA:B6EHV3" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR004489" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR012675" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:B6EHV3" FT /protein_id="CAQ78530.1" FT /translation="MKLNFSIYRYNPDVDNAPHMKAYTLEVEEGSDMMVLDALILLKEQ FT DPTISFRRSCREGVCGSDGLNMNGKNGLACITPLSELIGKGDLVIRPLPGLPVVRDLIV FT DMAQFYENYEKVKPFLISDGATPPSRENLQSPEEREHLDGLYECIMCACCTTSCPSFWW FT NPDKFIGPAGLLAAYRWLIDSRDTATNERLSNLDDAFSVFRCHGIMNCVSVCPKGLNPT FT KAIGHIKTMLLKKAV" FT misc_feature 940230..940265 FT /gene="sdhB" FT /locus_tag="VSAL_I0845" FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT /inference="protein motif:ProSite:PS00198" FT CDS 940625..943441 FT /transl_table=11 FT /gene="sucA" FT /locus_tag="VSAL_I0846" FT /old_locus_tag="TVS0703" FT /product="2-oxoglutarate dehydrogenase E1 component" FT /EC_number="1.2.4.2" FT /db_xref="GOA:B6EHV4" FT /db_xref="InterPro:IPR001017" FT /db_xref="InterPro:IPR005475" FT /db_xref="InterPro:IPR011603" FT /db_xref="UniProtKB/TrEMBL:B6EHV4" FT /protein_id="CAQ78531.1" FT /translation="MQNSVMKAWFESSHLAGANATYVEELYELYLSDPEIVSDEWREVF FT DTLPVENTGVSEQAHSPVRDYFRRLAKETKQVSAQVNDPDVDAKQVRVLQLINAYRFRG FT HQNANLDPLELQQHEYVAELEPAFHNLTDADFSETFNVGSFASGQETMKLSDLYEALRG FT TYCGSVGAEYMHITNTEEKRWIQQRLESVAGKPTFTPQEKLTFLEELTAAEGLERYLGA FT KFPGAKRFSLEGGDAMVPMVKEIIRRGGENGCREIVIGMAHRGRLNMLINVLGKKPQDL FT FDEFAGKHGESWGTGDVKYHQGFSSDFATPGGNVHLALAFNPSHLEIVNPVVIGSVRAR FT QDRLNDAAGDKVIPITIHGDSAIAGQGVVAETFNMSQARAFHVGGTIRIVINNQVGFTT FT SNPKDMRSTQYCTDIAKMVQAPIFHVNADDPEAVAFVTRIALDYRNEFKRDVVIDLVCY FT RRHGHNEADEPNATQPLMYQKIKKHPTPRKLYADTLIARQDLELETTTQLINEYRDALD FT HGEVVVKEWRPMQLHNVDWTPFLGHDWNIEWDNKFDKTRLVELGQRVCQYPESHKLHSR FT VNKMCNDRISMVAGEKAIDWGMAETLAYATLVDEGQRIRITGQDSGRGTFFHRHAVLHN FT QSDASTYVPLANIHDKQGPFEVHDSVLSEAAVLAFEYGYATAEPSGLTIWEAQFGDFAN FT CAQVVIDQFISSGEQKWGRMCGLTMLLPHGYEGQGPEHSSARLERFLQMCAEQNMQVVV FT PSTPAQVYHMLRRQVVRPMRRPLIVMSPKSLLRHPLCTSSLEDLAEGNFQPAIPEIDAL FT DPALVKRVVFCSGKVYFDLLEQRRTNEQNDVAIVRIEQLYPFPKEDVEAAIAQYTNVVD FT YVWCQEEPQNQGAWYSSQHNFRSALPASAILHYAGRPASASPAVGYMSVHVKQQKALVE FT DALTLDKN" FT misc_feature 941246..942220 FT /gene="sucA" FT /locus_tag="VSAL_I0846" FT /note="HMMPfam hit to PF00676, Dehydrogenase E1 FT component,score 3.2e-39" FT /inference="protein motif:HMMPfam:PF00676" FT misc_feature 942404..942988 FT /gene="sucA" FT /locus_tag="VSAL_I0846" FT /note="HMMPfam hit to PF02779, Transketolase, pyridine FT binding domain, score 5.6e-72" FT /inference="protein motif:HMMPfam:PF02779" FT CDS 943461..944672 FT /transl_table=11 FT /gene="sucB" FT /locus_tag="VSAL_I0847" FT /old_locus_tag="TVS0704" FT /product="dihydrolipoamide succinyltransferase component of FT 2-oxoglutarate dehydrogenase complex" FT /EC_number="2.3.1.61" FT /db_xref="GOA:B6EHV5" FT /db_xref="InterPro:IPR000089" FT /db_xref="InterPro:IPR001078" FT /db_xref="InterPro:IPR003016" FT /db_xref="InterPro:IPR004167" FT /db_xref="InterPro:IPR006255" FT /db_xref="InterPro:IPR011053" FT /db_xref="InterPro:IPR023213" FT /db_xref="UniProtKB/TrEMBL:B6EHV5" FT /protein_id="CAQ78532.1" FT /translation="MTIEILVPDLPESVADATVATWHKKPGDTVERDEILVDIETDKVV FT LEVPAPEAGVLEAIFEDEGATVLSKQLLAKIKLGAVVGEPTKDVTNETESSPDKRHTAS FT LAEEKNDALSPAVRRLLGEHDIKASDVKGTGVGGRITREDVDAHVAALKATSAKATVSN FT EPAAPLAHRSQKRVPMTRLRKTVARRLLEAKNSTAMLTTFNEVNMKPIMELRKQYQEQF FT EKRHGTRLGFMSFYVKAVTEALKRYPEVNASIDGDDIIYHNYFDISMAVSTPRGLVTPV FT LKDCDALGFADIEKGIKELAIKGRDGKLAVEDLIGGNFTITNGGVFGSLMSTPIINPPQ FT AAILGMHKIQDRPMAVNGKVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPARL FT LLDV" FT misc_feature 943467..943688 FT /gene="sucB" FT /locus_tag="VSAL_I0847" FT /note="HMMPfam hit to PF00364, Biotin-requiring FT enzyme,score 3.2e-25" FT /inference="protein motif:HMMPfam:PF00364" FT misc_feature 943539..943628 FT /gene="sucB" FT /locus_tag="VSAL_I0847" FT /note="PS00189 2-oxo acid dehydrogenases acyltransferase FT component lipoyl binding site." FT /inference="protein motif:ProSite:PS00189" FT misc_feature 943797..943907 FT /gene="sucB" FT /locus_tag="VSAL_I0847" FT /note="HMMPfam hit to PF02817, e3 binding domain, score FT 2.3e-17" FT /inference="protein motif:HMMPfam:PF02817" FT misc_feature 943971..944663 FT /gene="sucB" FT /locus_tag="VSAL_I0847" FT /note="HMMPfam hit to PF00198, 2-oxoacid dehydrogenases FT acyltransferas, score 3e-142" FT /inference="protein motif:HMMPfam:PF00198" FT CDS 944824..945990 FT /transl_table=11 FT /gene="sucC" FT /locus_tag="VSAL_I0848" FT /old_locus_tag="TVS0705" FT /product="succinyl-CoA synthetase beta chain" FT /EC_number="6.2.1.5" FT /db_xref="GOA:B6EHV6" FT /db_xref="InterPro:IPR005809" FT /db_xref="InterPro:IPR005811" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013650" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR016102" FT /db_xref="InterPro:IPR017866" FT /db_xref="UniProtKB/Swiss-Prot:B6EHV6" FT /protein_id="CAQ78533.1" FT /translation="MNLHEYQAKQLFAEYGLPVPEGYACDTAQEAFEAAGRISTAKKVV FT KCQVHAGGRGKAGGVELHDTKEGVKEFAQKWLGKNLVTFQTDAKGQPVTKVLVEEASNI FT ANELYLGAVVDRATRRIVFMASTEGGVDIEKIAEETPELIHQAAIDPLVGPQAFQGREL FT AFKLGLEGDQIKQFVKIFLGLGNMFAQYDLALLEINPLVVTAEGNLLCLDGKINIDSNA FT MYRQPKLREMHDPSQEDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGG FT QPANFLDVGGGATKERVTEAFKIILSDSNVKAVLVNIFGGIVRCDLIADGIIGAVEEVG FT VKVPVVVRLEGNNAPLGSQKLAESGLNIIAATSLTEAAEKVVAAAEGK" FT misc_feature 944827..945432 FT /gene="sucC" FT /locus_tag="VSAL_I0848" FT /note="HMMPfam hit to PF08442, ATP-grasp domain, score FT 5e-116" FT /inference="protein motif:HMMPfam:PF08442" FT misc_feature 945559..945969 FT /gene="sucC" FT /locus_tag="VSAL_I0848" FT /note="HMMPfam hit to PF00549, CoA-ligase, score 6.3e-80" FT /inference="protein motif:HMMPfam:PF00549" FT misc_feature 945592..945666 FT /gene="sucC" FT /locus_tag="VSAL_I0848" FT /note="PS01217 ATP-citrate lyase / succinyl-CoA ligases FT family signature 3." FT /inference="protein motif:ProSite:PS01217" FT CDS 945990..946862 FT /transl_table=11 FT /gene="sucD" FT /locus_tag="VSAL_I0849" FT /old_locus_tag="TVS0706" FT /product="succinyl-CoA synthetase alpha chain" FT /EC_number="6.2.1.5" FT /db_xref="GOA:B6EHV7" FT /db_xref="InterPro:IPR003781" FT /db_xref="InterPro:IPR005810" FT /db_xref="InterPro:IPR005811" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR016102" FT /db_xref="InterPro:IPR017440" FT /db_xref="UniProtKB/TrEMBL:B6EHV7" FT /protein_id="CAQ78534.1" FT /translation="MSVLINKDTKVICQGFTGGQGTFHSEQAIDYGTKMVGGVSPGKGG FT QVHLGLPVFNTVRDAVEATGATASVIYVPAPFCKDAILEAIDAGIKLIITITEGIPTLD FT LLDVKVRLDAEGVVMIGPNCPGVITPDECKIGIMPGHIHKKGKVGIVSRSGTLTYEAVK FT QTTDEGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPETEAIVMIGEIGGTAEEEAAEFI FT KHNVTKPVVSYIAGVTAPPGKRMGHAGAIISGGKGTAEDKFAALEAAGVKTVKSLADIG FT KGLREITGW" FT misc_feature 945999..946289 FT /gene="sucD" FT /locus_tag="VSAL_I0849" FT /note="HMMPfam hit to PF02629, CoA binding domain, score FT 1e-50" FT /inference="protein motif:HMMPfam:PF02629" FT misc_feature 946386..946811 FT /gene="sucD" FT /locus_tag="VSAL_I0849" FT /note="HMMPfam hit to PF00549, CoA-ligase, score 8.2e-69" FT /inference="protein motif:HMMPfam:PF00549" FT misc_feature 946443..946532 FT /gene="sucD" FT /locus_tag="VSAL_I0849" FT /note="PS01216 ATP-citrate lyase / succinyl-CoA ligases FT family signature 1." FT /inference="protein motif:ProSite:PS01216" FT misc_feature 946695..946736 FT /gene="sucD" FT /locus_tag="VSAL_I0849" FT /note="PS00399 ATP-citrate lyase / succinyl-CoA ligases FT family active site." FT /inference="protein motif:ProSite:PS00399" FT CDS complement(946963..947748) FT /transl_table=11 FT /gene="znuB" FT /locus_tag="VSAL_I0850" FT /old_locus_tag="TVS0707" FT /product="high-affinity zinc uptake system membrane protein FT ZnuB" FT /db_xref="GOA:B6EHV8" FT /db_xref="InterPro:IPR001626" FT /db_xref="UniProtKB/TrEMBL:B6EHV8" FT /protein_id="CAQ78535.1" FT /translation="MIEFLLPALLAGLGIALLAGPLGSFVVWRKMAYFGDTLAHASLLG FT LSLGFLFDINLNLALIVCCIAIALLLVTLQKQRLVATDTLLGILAHSSLSLGLVAVSFL FT DNVRVDLMSYLFGDLLAVTYNDLLYIYTGVIIVLGQIYIVWRPLLSSTISEELAQVEGV FT NVELMRLVLMLMVGLVIAISMKFVGALIITSLLIIPAATARRFSRSPEQMVLFASIFGC FT IAVIAGLALSWHYDTPAGPSVVVSGAAIFMLSQLKKTTQ" FT misc_feature complement(946975..947748) FT /gene="znuB" FT /locus_tag="VSAL_I0850" FT /note="HMMPfam hit to PF00950, ABC 3 transport family,score FT 5.7e-93" FT /inference="protein motif:HMMPfam:PF00950" FT misc_feature complement(order(947044..947112,947155..947223, FT 947302..947370,947428..947496,947533..947601, FT 947668..947736)) FT /gene="znuB" FT /locus_tag="VSAL_I0850" FT sig_peptide complement(947692..947748) FT /gene="znuB" FT /locus_tag="VSAL_I0850" FT CDS complement(947745..948515) FT /transl_table=11 FT /gene="znuC" FT /locus_tag="VSAL_I0851" FT /old_locus_tag="TVS0708" FT /product="high-affinity zinc uptake system atp-binding FT protein ZnuC" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EHV9" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017882" FT /db_xref="UniProtKB/TrEMBL:B6EHV9" FT /protein_id="CAQ78536.1" FT /translation="MTTLLTLQDVCVVFDDRHVLDNISLSIESNKIITLIGPNGAGKST FT LVKAILGLQKPTSGQIKREKKLRIGYVPQKIHLNDSLPLTVQGFLKLAGKYSQQEYLDA FT LKLVEAEHLLNSNMHKLSGGESQRVLLARALLQRPDLLVLDEPAQGVDVQGQISLYALI FT ESIRHRFNCAIFMVSHDLHLVMAKTDEVICLQHHICCSGAPESISKHPKYIALFGQQRD FT QELAFYHHDHHHNHDLSGEPTNGSCCSKNKKASS" FT misc_feature complement(947925..948428) FT /gene="znuC" FT /locus_tag="VSAL_I0851" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.8e-51" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(948111..948155) FT /gene="znuC" FT /locus_tag="VSAL_I0851" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(948384..948407) FT /gene="znuC" FT /locus_tag="VSAL_I0851" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 948604..949497 FT /transl_table=11 FT /gene="znuA" FT /locus_tag="VSAL_I0852" FT /old_locus_tag="TVS0709" FT /product="high-affinity zinc uptake system protein ZnuA FT precursor" FT /db_xref="GOA:B6EHW0" FT /db_xref="InterPro:IPR006127" FT /db_xref="InterPro:IPR006128" FT /db_xref="UniProtKB/TrEMBL:B6EHW0" FT /protein_id="CAQ78537.1" FT /translation="MSKKNQFIALCLCTLLSAQAQAMNVLSSVKPINLIVQELTNGVSE FT SSYLVPQSASPHDYALRPSDIKKIKNADMIIWYGNDLEPFLSKVLADQKNVITISEFSS FT VDFYHFDQHGDDAHAEESGHHHNTDPHFWLGPKEALGVAKEITVQLIKIDPLNKDQYKS FT NLAAFENKLAQAVETISKQLKPVQSKGYFVFHDAYGYFERYFGMNNLGHFTVSPDRKPG FT AKTLINIKKSLLNQQAVCVFSEPQFEPAIVTTITRGTEVHKGELDPLAIQQADENGAYF FT IFLSTISNELSRCLSQ" FT sig_peptide 948604..948684 FT /gene="znuA" FT /locus_tag="VSAL_I0852" FT misc_feature 948622..949479 FT /gene="znuA" FT /locus_tag="VSAL_I0852" FT /note="HMMPfam hit to PF01297, Periplasmic solute binding FT protein family, score 8.9e-30" FT /inference="protein motif:HMMPfam:PF01297" FT CDS 949494..950834 FT /transl_table=11 FT /locus_tag="VSAL_I0853" FT /old_locus_tag="TVS0710" FT /product="exported peptidase" FT /note="CDS contanins a rare Isoleucine start codon (ATA)" FT /db_xref="InterPro:IPR007340" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR016047" FT /db_xref="UniProtKB/TrEMBL:B6EHW1" FT /protein_id="CAQ78538.1" FT /translation="MKYKKAIAAKVGTLSKRHKFILLSLSLFTCVILIWEPTHSLGTSS FT SVQGRNEVSLSSDNLQTLADQNSEPVETIFEQDDPNFNAPKDELDKQLDAADTVHSHTV FT ASGETLGEIFKQYALPMADMYSLLDVNKSAANMRVGADLEWQQDNDGKLTELKIHRNIK FT DTDVYAWSGDKYTFTQLEEKGEIKPVFLTGRVTSNFYNSARSAGLTPGQIQTLTKQLQW FT KFDFGREARKGDKFAVEINKEFIDGKAVSSGEVEAVLYKNGSREITLLKHTDGHYYDVQ FT GRSLNRALDRYPTHERFRISSPFNPYRKHPITGRISPHNGTDFAAPVGTSVYATGDGVV FT VRALHHPLAGNYVIIKHGREYMTRYLHLSKILVKKGQKVSMGDKIALSGNTGRSTGPHL FT HYELIKNGRAVNAMKVPLPQASPVDNSERAHFKQQAKLTIDALRDQV" FT sig_peptide 949494..949640 FT /locus_tag="VSAL_I0853" FT misc_feature 949551..949610 FT /locus_tag="VSAL_I0853" FT misc_feature 949785..950030 FT /locus_tag="VSAL_I0853" FT /note="HMMPfam hit to PF04225, Opacity-associated protein A FT LysM-like, score 4.3e-05" FT /inference="protein motif:HMMPfam:PF04225" FT misc_feature 950442..950729 FT /locus_tag="VSAL_I0853" FT /note="HMMPfam hit to PF01551, Peptidase family M23, score FT 1.6e-49" FT /inference="protein motif:HMMPfam:PF01551" FT CDS complement(950894..951664) FT /transl_table=11 FT /locus_tag="VSAL_I0854" FT /old_locus_tag="TVS0711" FT /product="putative exported protein" FT /db_xref="UniProtKB/TrEMBL:B6EHW2" FT /protein_id="CAQ78539.1" FT /translation="MKKFARAAVLMVLVFGRPQVQAASLIESIEPDFQEANQSELDRHH FT VLHSLNGLLSIESWNQFSHQPYSDFDILNSKAHQAQRELENICKETALISNTQPQFAGV FT KSSERALLKIEQELNGQVNKLTDIARATIVADSIPDLVTAYESLNRETTILSVTNRFST FT PAKSGYRDIKLLVELPKTKLVAEVQLHLKDIAIVKNGAEHKIYEEIQNMERLVFVEDRN FT FTEFEQARITKLRALSQSLYANAWKSYLPTQALA" FT sig_peptide complement(951599..951664) FT /locus_tag="VSAL_I0854" FT CDS 952023..953303 FT /transl_table=11 FT /gene="tyrS" FT /locus_tag="VSAL_I0855" FT /old_locus_tag="TVS0712" FT /product="tyrosyl-tRNA synthetase" FT /EC_number="6.1.1.1" FT /db_xref="GOA:B6EHW3" FT /db_xref="InterPro:IPR002305" FT /db_xref="InterPro:IPR002307" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR024088" FT /db_xref="InterPro:IPR024107" FT /db_xref="UniProtKB/Swiss-Prot:B6EHW3" FT /protein_id="CAQ78540.1" FT /translation="MTATNELLQDLKARGLIAQCTADEELAEHLSTDCRTLYCGFDPTA FT DSLHIGSLVPLLVLKRFQQAGHKPLALVGGATGLIGDPSFKAAERQLNTSDVVGDWVNK FT IRAQVSAFVDFNESKNGAEVVNNLDWIGEINVIEFMRDIGKHFSVNSMIQKESVKQRID FT REGSGISFTEFSYMLLQSYDFAALNKAKECTLQIGGSDQWGNITGGIDLTRRMNRNKVF FT GLTLPLVTKSDGTKFGKTESGTIWLDPSKTSPYAFFQFWLGTADADVYDFLRFFTFLSV FT DEIAAFEESDKSVQGRPAGQGVLAKEVTRLVHGEEGLASSERITAALFSGDLASLTETD FT LAQLAQDGLPTTELEASEQTIVEVLTQSELAKSNKMAREFIGNGAVSVNGEKVADAEVI FT LKKEDALFGKYSVIKRGKKLFNLYIWK" FT misc_feature 952125..953012 FT /gene="tyrS" FT /locus_tag="VSAL_I0855" FT /note="HMMPfam hit to PF00579, tRNA synthetases class I (W FT and Y), score 6.5e-116" FT /inference="protein motif:HMMPfam:PF00579" FT misc_feature 953097..953240 FT /gene="tyrS" FT /locus_tag="VSAL_I0855" FT /note="HMMPfam hit to PF01479, S4 domain, score 8.4e-06" FT /inference="protein motif:HMMPfam:PF01479" FT CDS complement(953440..955812) FT /transl_table=11 FT /locus_tag="VSAL_I0856" FT /old_locus_tag="TVS0713" FT /product="conserved hypothetical protein" FT /note="Expression may be stress-induced" FT /db_xref="GOA:B6EHW4" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013704" FT /db_xref="InterPro:IPR020612" FT /db_xref="InterPro:IPR022946" FT /db_xref="InterPro:IPR023404" FT /db_xref="InterPro:IPR024560" FT /db_xref="UniProtKB/TrEMBL:B6EHW4" FT /protein_id="CAQ78541.1" FT /translation="MHNVTPINEYPKFWAECYGTAPFFPTSRKEMDQLGWDSCDIIIVT FT GDAYVDHPSFGMAIIGRLLEAQGFRVGIIAQPKWENKDEFMILGQPNLFFGITAGNMDS FT MINRYTSDKKLRHDDAYTPNNEGGKRPDRAVLVYSQRCREAFKDTPIVLGGIEASLRRL FT AHYDYWSDKVRRSVLFDAKGDILLFGNAERALVEVAHRLASGEDVKTMTNIRGTAVNLA FT AEPEGFKIIDSSRIEKPGKTMFVPINPYATEEQCETNKAEVKEEQPQVITVTASRHDSK FT TTAIRIPPFEKLNSDRILYAHASRIMHLETNPYSGRALIQRHGDRELWVNQAPIPLTTE FT EMDFVFDLPYARVPHPMYGKAKIPAYEMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNR FT SKKSILNELEEIRDKVPGFTGTISDLGGPTANMYRLGCSIPKAEATCRRPSCVFPKICD FT KLNTDHVHTIDLYREARQVKGIKKVLIASGVRYDLAIESPEYVRELVTHHVGGYLKIAP FT EHTEKGPLDLMMKPEMGSYDRFKTMFEKYSKEAGKKQYLIPYFISAHPGTEDEDMLNLA FT MWLKKNNLECDQVQNFYPSPMCNATSMYYSETNPLKRVKYKKREDVTVAKGERQRRLHK FT GLLRYHDPKNWKMIREALTEMGKKHLIGDKPHCLVPEHDIDTQTPAERRQTGRHGAKRF FT ATKHTQAQFDGDPRTSNNRSGQNNSNRSGKPATQGQQQNRTGNSGSDKPASSGQKNGVR FT NGYSNNKPSGNGKPGSSKPTANKPSGSAPKRNKPKHR" FT misc_feature complement(954076..954696) FT /locus_tag="VSAL_I0856" FT /note="HMMPfam hit to PF04055, Radical SAM FT superfamily,score 1.3e-07" FT /inference="protein motif:HMMPfam:PF04055" FT misc_feature complement(954634..954696) FT /locus_tag="VSAL_I0856" FT /note="PS01278 Uncharacterized protein family UPF0004 FT signature." FT /inference="protein motif:ProSite:PS01278" FT misc_feature complement(954697..955746) FT /locus_tag="VSAL_I0856" FT /note="HMMPfam hit to PF08497, Radical SAM N-terminal,score FT 1.2e-259" FT /inference="protein motif:HMMPfam:PF08497" FT CDS complement(956160..957527) FT /transl_table=11 FT /gene="dcuC" FT /locus_tag="VSAL_I0857" FT /old_locus_tag="TVS0714" FT /product="anaerobic C4-dicarboxylate transporter DcuC" FT /db_xref="GOA:B6EHW5" FT /db_xref="InterPro:IPR004669" FT /db_xref="InterPro:IPR018385" FT /db_xref="UniProtKB/TrEMBL:B6EHW5" FT /protein_id="CAQ78542.1" FT /translation="MLELMIGLVITVLVGYFIVKGYKAAGVLLTAGLALLMIAGLLGHT FT VLPAKVATTGNLLTDALEYVKYMLQYRGGGLGMQIMLLCGFASYMTHIGANNVVVKQFS FT KPLAFIKSPYVLLVAAYIVACLMSLAVSSATGLGVLLMATLFPMMTAMGISRPAAVAVC FT ASPAAIILSPTSGDVIVAAEKSGLPLHTFAVETVLPVSICAIIVMAAAAFFWNKYLDKK FT ENTPMEKVDISAMEVNAPSYYAILPFLPIVGVFIFNGQTIPGLSLDIYTIVVASIFIGA FT IVNFITNRFNGRATLEDLESCYEGMADAFKGVVMLLVAAGVFAQGLMSVGAIDNLLHLA FT DSAGAGGMALMLLLTGLTVAAAIATGSGNAPFYAFVELAPQLADKMGLSPAFLIIPMLQ FT ASNLGRTISPVSGVIVATSGMAKISPFEVVKRTSVPVICGLITVIVGTMVLVPMYV" FT misc_feature complement(order(956166..956234,956433..956501, FT 956544..956603,956664..956732,956742..956810, FT 956871..956939,956982..957050,957063..957131, FT 957141..957209,957228..957296,957384..957452, FT 957471..957518)) FT /gene="dcuC" FT /locus_tag="VSAL_I0857" FT misc_feature complement(956166..957440) FT /gene="dcuC" FT /locus_tag="VSAL_I0857" FT /note="HMMPfam hit to PF06808, DctM-like transporters,score FT 0.00091" FT /inference="protein motif:HMMPfam:PF06808" FT misc_feature complement(956172..957524) FT /gene="dcuC" FT /locus_tag="VSAL_I0857" FT /note="HMMPfam hit to PF03606, C4-dicarboxylate anaerobic FT carrier, score 3.8e-189" FT /inference="protein motif:HMMPfam:PF03606" FT misc_feature complement(956325..957515) FT /gene="dcuC" FT /locus_tag="VSAL_I0857" FT /note="HMMPfam hit to PF03600, Citrate transporter, score FT 0.0023" FT /inference="protein motif:HMMPfam:PF03600" FT CDS 957853..958560 FT /transl_table=11 FT /locus_tag="VSAL_I0858" FT /old_locus_tag="TVS0715" FT /product="membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EHW6" FT /protein_id="CAQ78543.1" FT /translation="MFFQTLQYILIPALLGAQILLTIILHKGDICPGQRGRIHKWLPVL FT ILGWCLIAGVGMTYAMVFAINLIPAIAIAGFYFSVKTSKTRDKGPLIIMALANGFAAAS FT FVNLALGSGSFTQLFFALIGPFLFGALLTHLLLTLARTRLQAFHRLLPISGIISGIVMV FT VILLCQTLSIHEIFLDRMAVKLGIGLGLMLLSLGLWNFHLFNKQAAKWQFLVPASIIMA FT ISGYYQFQLFFVM" FT misc_feature order(957862..957930,957964..958023,958033..958092, FT 958117..958185,958195..958263,958300..958368, FT 958396..958464,958483..958551) FT /locus_tag="VSAL_I0858" FT CDS 958628..958822 FT /transl_table=11 FT /locus_tag="VSAL_I0859" FT /old_locus_tag="TVS0716" FT /product="hypothetical protein" FT /note="Similar to Vibrio vulnificus Hypothetical protein FT UniProt:Q8DAI1 (76 aa) fasta scores: E()=2e-12, 68.254% id FT in 63 aa overlap; query 1-63; subject 11-73. Expression may FT be stress-induced. The CDS may be truncated at the FT N-terminus" FT /db_xref="UniProtKB/TrEMBL:B6EHW7" FT /inference="similar to sequence:UniProt:Q8DAI1" FT /protein_id="CAQ78544.1" FT /translation="MDLSNAHGLESGILLGIINEKLRLECHSLEELSRMYELDTEGVQD FT KLSGLGYKYDPLTNQFKNK" FT CDS complement(958840..959751) FT /transl_table=11 FT /gene="metR" FT /locus_tag="VSAL_I0860" FT /old_locus_tag="TVS0717" FT /product="transcriptional activator MetR" FT /function="involved in at least two processes in V.harveyi; FT methionine biosynthesis and as a repressor on luminescence" FT /db_xref="GOA:B6EHW8" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EHW8" FT /protein_id="CAQ78545.1" FT /translation="MIELKHLKTLVTLRDTGSLTATANALHLTQSALSHQLKDFETRLG FT GTVFLRKTRPVKFTSEGEILLTLADDILPKMARAEYDIASLKEDLHGRLHMAIECHSCF FT QWLMPAIKEYQVGWPEVELDFSSGFGFEPLPALVNGDLDLVITSDIQPRNEVHYEPLFD FT FEMRLVMATNHPLASKEYIEPEDLIDQTMMTYPVQKQRLDVVKHFLSPNNVEPAKWKQA FT ENTLMLIQMVSAGLGVAALPNWAISEFSRQGLIESKPLGKGLWRRLFAAVRDSEHDKKY FT LQAFFSTAKQQSQSHLDGIKMT" FT misc_feature complement(958870..959493) FT /gene="metR" FT /locus_tag="VSAL_I0860" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 3.7e-41" FT /inference="protein motif:HMMPfam:PF03466" FT misc_feature complement(959548..959589) FT /gene="metR" FT /locus_tag="VSAL_I0860" FT /note="PS00300 SRP54-type proteins GTP-binding domain FT signature." FT /inference="protein motif:ProSite:PS00300" FT misc_feature complement(959563..959742) FT /gene="metR" FT /locus_tag="VSAL_I0860" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 1.6e-17" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature complement(959608..959700) FT /gene="metR" FT /locus_tag="VSAL_I0860" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature complement(959638..959703) FT /gene="metR" FT /locus_tag="VSAL_I0860" FT /note="Predicted helix-turn-helix motif with score FT 1892.000, SD 5.63 at aa 17-38, sequence FT GSLTATANALHLTQSALSHQLK" FT CDS 959972..960271 FT /pseudo FT /transl_table=11 FT /gene="metE" FT /locus_tag="VSAL_I0861" FT /old_locus_tag="TVS0718" FT /product="5-methyltetrahydropteroyltriglutamate--homocyst FT eine methyltransferase (fragment)" FT /EC_number="2.1.1.14" FT /note="Similar to Escherichia coli FT 5-methyltetrahydropteroyltriglutamate--homocysteine FT methyltransferase MetE UniProt:P25665 (752 aa) fasta FT scores: E()=1.1e-20, 61.702% id in 94 aa. CDS is truncated FT by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:P25665" FT misc_feature 959999..960271 FT /gene="metE" FT /locus_tag="VSAL_I0861" FT /note="HMMPfam hit to PF08267, Cobalamin-independent FT synthase, N-termina, score 1.6e-07" FT /inference="protein motif:HMMPfam:PF08267" FT repeat_region 960274..961278 FT /note="VSa6" FT repeat_region 960274..960292 FT /note="IR of VSa6" FT CDS 960370..961251 FT /transl_table=11 FT /locus_tag="VSAL_I0862" FT /old_locus_tag="TVS0719" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ78547.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 960697..961191 FT /locus_tag="VSAL_I0862" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 961260..961278 FT /note="IR of VSa6" FT CDS complement(961294..964896) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0863" FT /old_locus_tag="TVS0720" FT /product="accessory colonization factor AcfD precursor FT (fragment)" FT /note="Similar to Vibrio cholerae Accessory colonization FT factor AcfD precursor UniProt:Q9KTQ4 (1520 aa) fasta FT scores: E()=5.8e-72, 35.620% id in 1283 aa. CDS is FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:Q9KTQ4" FT misc_feature complement(964843..964875) FT /locus_tag="VSAL_I0863" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(965183..966433) FT /transl_table=11 FT /gene="glyA" FT /locus_tag="VSAL_I0864" FT /old_locus_tag="TVS0721" FT /product="serine hydroxymethyltransferase" FT /EC_number="2.1.2.1" FT /db_xref="GOA:B6EHX0" FT /db_xref="InterPro:IPR001085" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="InterPro:IPR019798" FT /db_xref="UniProtKB/Swiss-Prot:B6EHX0" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /experiment="The expressed protein is found to be exported FT (extracellular) by Aliivibrio salmonicida" FT /protein_id="CAQ78549.1" FT /translation="MLKRDMNIADYDADLFAAIQEETVRQEEHIELIASENYTSPRVME FT AQGSQLTNKYAEGYPGKRYYGGCEFVDKVETLAINRACELFGAEYANVQPHSGSQANNA FT VYMALLNAGDTVLGMSLAHGGHLTHGSPVNFSGKLYNIIPYGIDEAGQIDYEEMEALAI FT EHKPKMIIGGFSAYSQICDWARMREIADKVGAYFFVDMAHVAGLIAAGVYPNPVPHAHV FT VTTTTHKTLAGPRGGLILSNEGEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEP FT EFKEYQVRVVANAKAMVAEFLARGYNIVSGSTENHLFLVDLIDKDITGKEADAALGSAN FT ITVNKNSVPNDPRSPFVTSGIRVGSPSITRRGFSEEDAKNLAGWMCDILDNMGDESVIE FT ATKAKVLEICKRLPVYA" FT misc_feature complement(965252..966280) FT /gene="glyA" FT /locus_tag="VSAL_I0864" FT /note="HMMPfam hit to PF01276, Orn/Lys/Arg FT decarboxylase,major doma, score 0.065" FT /inference="protein motif:HMMPfam:PF01276" FT misc_feature complement(965279..966412) FT /gene="glyA" FT /locus_tag="VSAL_I0864" FT /note="HMMPfam hit to PF00464, Serine FT hydroxymethyltransferase, score 2.3e-269" FT /inference="protein motif:HMMPfam:PF00464" FT misc_feature complement(965465..966229) FT /gene="glyA" FT /locus_tag="VSAL_I0864" FT /note="HMMPfam hit to PF01212, Beta-eliminating lyase,score FT 0.0018" FT /inference="protein motif:HMMPfam:PF01212" FT misc_feature complement(965723..965773) FT /gene="glyA" FT /locus_tag="VSAL_I0864" FT /note="PS00096 Serine hydroxymethyltransferase FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00096" FT CDS 966748..967356 FT /transl_table=11 FT /locus_tag="VSAL_I0865" FT /old_locus_tag="TVS0722" FT /product="putative ABC transporter permease" FT /note="Expression may be stress-induced" FT /db_xref="InterPro:IPR003740" FT /db_xref="UniProtKB/TrEMBL:B6EHX1" FT /protein_id="CAQ78550.1" FT /translation="MEKIKHTHKEDVIAILTGTFLVSQGIFFLQAANLLTGGTTGLALL FT LSQMTDISFGVLYFVCNLPFYALAWNRFGKKFALTSLISGALVSIMTDHLNMMISVDHI FT NDIYCAVAGGLLMGLGMLILFRHRSSLGGFNVLCLFIQEKFGISVGKVQMAIDFCILSA FT SFFFITPSLLLISVLGAIVLNIVLAMNHKPNRYIVTYGS" FT misc_feature 966778..967023 FT /locus_tag="VSAL_I0865" FT /note="HMMPfam hit to PF02588, Uncharacterized BCR, YitT FT family COG1284, score 8.6e-18" FT /inference="protein motif:HMMPfam:PF02588" FT misc_feature order(966781..966849,966892..966960,967066..967122, FT 967240..967308) FT /locus_tag="VSAL_I0865" FT misc_feature 967063..967308 FT /locus_tag="VSAL_I0865" FT /note="HMMPfam hit to PF02588, Uncharacterized BCR, YitT FT family COG1284, score 2.2e-19" FT /inference="protein motif:HMMPfam:PF02588" FT CDS complement(967429..967755) FT /transl_table=11 FT /locus_tag="VSAL_I0866" FT /old_locus_tag="TVS0723" FT /product="putative lipoprotein" FT /note="Expression may be stress-induced" FT /db_xref="InterPro:IPR018660" FT /db_xref="UniProtKB/TrEMBL:B6EHX2" FT /protein_id="CAQ78551.1" FT /translation="MKKLFALAAVMTLAGCSTTMPDMGTAQPVHYTCEAGRNFQITFND FT DNALLQLPKEDYALKRAVSASGMKYISDDGMPDVSKTIVFHGKGDSAILELGRVVLKEC FT TVIQ" FT sig_peptide complement(967678..967755) FT /locus_tag="VSAL_I0866" FT misc_feature complement(967708..967740) FT /locus_tag="VSAL_I0866" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(join(967879..968538,968542..968847)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0867" FT /old_locus_tag="TVS0724" FT /product="oligopeptide transport ATP-binding protein FT (pseudogene)" FT /note="Similar to Bacillus subtilis Oligopeptide transport FT ATP-binding protein AppF UniProt:P42065 (329 aa) fasta FT scores: E()=8.7e-39, 58.095% id in 210 aa. CDS contains a FT nonsense mutation (TCG to TAG) after codon 102. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ78552.1" FT /inference="similar to sequence:UniProt:P42065" FT misc_feature complement(967951..968151) FT /locus_tag="VSAL_I0867" FT /note="HMMPfam hit to PF08352, Oligopeptide/dipeptide FT transporter, C-termi, score 8.1e-35" FT /inference="protein motif:HMMPfam:PF08352" FT misc_feature complement(968158..968514) FT /locus_tag="VSAL_I0867" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 1.2e-13" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(968344..968388) FT /locus_tag="VSAL_I0867" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(968686..968709) FT /locus_tag="VSAL_I0867" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(968844..969854) FT /transl_table=11 FT /gene="dppD" FT /locus_tag="VSAL_I0868" FT /old_locus_tag="TVS0726" FT /product="dipeptide transport ATP-binding protein DppD" FT /db_xref="GOA:B6EHX4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010066" FT /db_xref="InterPro:IPR013563" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EHX4" FT /protein_id="CAQ78553.1" FT /translation="MDRQIILSVENVITEFETDEGIIRVLDGVSFDVPKGKTIGIVGES FT GCGKSVTALSIMGLLPKPYGNVVSGQILYGNTNLVQLSPSQLYEMRGNHISMIFQDPMT FT ALNPVHTIGKQLNEVLELHRSDLNKKQRLAYSIEMLEKVGMPSPESRLHEYPHSLSGGM FT RQRVMIAIALACEPDILICDEPTTALDVTIQAQILTLMKKLQDETGMSIIFITHDLGVV FT AEICDEVVVMYAGRVAEQADIFELFDNPLHPYTQGLMSSMPSLSLQPKTELETIQGTVP FT SLNEMPQGCRFSTRCKFKQDQCDLVVPELTQISPLHNVSCHFSGQLIENKSEGTL" FT misc_feature complement(968946..969143) FT /gene="dppD" FT /locus_tag="VSAL_I0868" FT /note="HMMPfam hit to PF08352, Oligopeptide/dipeptide FT transporter, C-termi, score 6e-30" FT /inference="protein motif:HMMPfam:PF08352" FT misc_feature complement(969150..969749) FT /gene="dppD" FT /locus_tag="VSAL_I0868" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 7.4e-62" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(969336..969380) FT /gene="dppD" FT /locus_tag="VSAL_I0868" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(969705..969728) FT /gene="dppD" FT /locus_tag="VSAL_I0868" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(969878..971758) FT /transl_table=11 FT /locus_tag="VSAL_I0869" FT /old_locus_tag="TVS0727" FT /product="extracellular solute-binding protein" FT /note="Similar to Bacillus subtilis oligopeptide-binding FT protein AppA (PDB 1XOC). Evalue=4e-12, identity=(100, 479)" FT /db_xref="GOA:B6EHX5" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:B6EHX5" FT /protein_id="CAQ78554.1" FT /translation="MCKPKRINNRKESMTIKNKMTLFSASAALFSVGLFSAELPTNLEW FT KTNDLAPTFASPEAVFGGTYRTYSLSFPQTFRSVGPDSNGAFRSWIVEANLPPLIQHPN FT TGEWLPGLATSWAFGDDNKTMYFKLNPKATWSDGKPVTADDYQFMLTLMRSKDIVAPWY FT NDFFTNEIADVISYDAHTIGVVSAKERNRDELIQYTNLMPRPAHFYGKPKLDENNDGID FT DKFVRKYNFKPEPVTGPYYIDKIRKGKNIVFKHVGEDWWGYENKYNQNRYNVEKINIKV FT IRDDDIALKHFEKGNLDSFTLLRPDLWHEKSNGKNYQNGYIQKAWVYNQAPVGAGGLWL FT NTAKPMLNDMNIRKGIMYATDFDMMIAKVLRGDYSRKPNGMGFGHIGYDNTTINAPTFD FT AKKAIEYFEKAGFEKIGPDGIRINAKGERLSFAITYSAQAHTPRIAVLREQAKLAGVDF FT ELNLIDGSSMFKYVLEKKHDISFHNMGTSEIPAYWEYFHSDNANKPQTNHFTNFTSPEL FT DTLIDSFKNEFDIDKKQALSREIQQAIADANVIVPGYMVPYARSGYWRWMKLPEKMATK FT QTGYLFHGWGFSQTFSTFWIDASIKKETKAAMKSGKAFEPVIIIDETYKL" FT misc_feature complement(970241..971440) FT /locus_tag="VSAL_I0869" FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding prot, score 4.5e-51" FT /inference="protein motif:HMMPfam:PF00496" FT sig_peptide complement(971648..971758) FT /locus_tag="VSAL_I0869" FT misc_feature complement(971648..971701) FT /locus_tag="VSAL_I0869" FT CDS complement(971751..972803) FT /transl_table=11 FT /gene="yejE" FT /locus_tag="VSAL_I0870" FT /old_locus_tag="TVS0728" FT /product="inner membrane ABC transporter permease protein" FT /db_xref="GOA:B6EHX6" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:B6EHX6" FT /protein_id="CAQ78555.1" FT /translation="MSSILKVSPLTQKKIQRFKAIKRSYWSFIILLLLLVLSIFAEVFV FT NSRALLVSYQGEWHFPTYGDVKSGEMFGLDYVHETNYRDLKAEFKEQDNGDFVVMPIVP FT WNPYEQDFSGDFPPTAPSVEAQHYLGTDTIGRDIVSRLVYGFRIAIGFALITLVISYAI FT GVSVGCAMGFFGGKFDLFFQRFIEIWSMVPFLFVIMILVSIMKPSFMLFTLINVMFGWM FT GMTWYMRTMTYKEKSREYVMAAKALGASNSRILFHHILPNTMVMIVTLAPFTIVANITA FT LTALDYLGLGLMPPTPSWGELLQQGKSNLDSPWIASSVVTAIVTVLIMVTFIGEGIREA FT FDPKKHTRYV" FT misc_feature complement(971763..972368) FT /gene="yejE" FT /locus_tag="VSAL_I0870" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 7.2e-44" FT /inference="protein motif:HMMPfam:PF00528" FT misc_feature complement(order(971802..971870,971949..972017, FT 972120..972179,972192..972251,972309..972377, FT 972666..972734)) FT /gene="yejE" FT /locus_tag="VSAL_I0870" FT sig_peptide complement(972675..972803) FT /gene="yejE" FT /locus_tag="VSAL_I0870" FT CDS complement(972806..973834) FT /transl_table=11 FT /gene="yejB" FT /locus_tag="VSAL_I0871" FT /old_locus_tag="TVS0729" FT /product="inner membrane ABC transporter permease protein" FT /db_xref="GOA:B6EHX7" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:B6EHX7" FT /protein_id="CAQ78556.1" FT /translation="MISYLFRRLLLVVPTFIGITLLIFALTRFVPGGPVERMLLSLQMQ FT GSSETGGTSSVTDGNNALSEEQIAELNAFYGLDKPVFEAYYDWLTKLVVLDLGESTRYY FT EPVWDMISERLPVSLFYGGMTFLLSYLISIPLGYFKALKHGSILDSMSSVAIFVGFSLP FT GYVIGVFLISLFSYQMEWFPMGGFVSDDFDDYGAIEQIKDIMWHAVLPLFCYLIGDFAL FT LTMTMKNNLMENLTADYVRTAIAKGLPFKTAVRKHALRNSLIPVASHFGNSLMFFMTGS FT FLIEVIFNIDGIGLLGYEAIMERDYPVVMGLFAINAMMLMIGNILSDVCVAVVDPRVKF FT GA" FT misc_feature complement(972815..973492) FT /gene="yejB" FT /locus_tag="VSAL_I0871" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 1.7e-43" FT /inference="protein motif:HMMPfam:PF00528" FT misc_feature complement(order(972833..972901,972971..973039, FT 973157..973225,973313..973381,973418..973486, FT 973742..973810)) FT /gene="yejB" FT /locus_tag="VSAL_I0871" FT misc_feature complement(973055..973141) FT /gene="yejB" FT /locus_tag="VSAL_I0871" FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT sig_peptide complement(973760..973834) FT /gene="yejB" FT /locus_tag="VSAL_I0871" FT CDS complement(974090..974266) FT /transl_table=11 FT /locus_tag="VSAL_I0872" FT /old_locus_tag="TVS0731" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EHX8" FT /protein_id="CAQ78557.1" FT /translation="MVIYMNKLDKNSMVSDEETIKTLPTQPAQSNDSINTWDQLTDEQQ FT QDILAHLTEVPFQ" FT CDS complement(974411..975142) FT /transl_table=11 FT /locus_tag="VSAL_I0873" FT /old_locus_tag="TVS0732" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR022201" FT /db_xref="UniProtKB/TrEMBL:B6EHX9" FT /protein_id="CAQ78558.1" FT /translation="MIVSHNELVAVTNKAFLGMRRTCGEADVIANMVADLQMVGLNGVR FT HFNNSTKFLTVEEDCPVEITMSKSGNLVVDLHGCSVACHLPVIVDYAVEKMVKRKRLSI FT TLTKCHNRWLAYSELVKLAAKGIACKAEWENGTSPKRTLYVLNRGCVSPELFLSDDVEL FT NSGKLNDMTIELSVRDFDVVALSEGYSIHINSAELNGSQENAWSHGIQVDDADWESLKK FT TATAILVENSEQSLKGAGELA" FT CDS complement(975139..976839) FT /transl_table=11 FT /locus_tag="VSAL_I0874" FT /old_locus_tag="TVS0733" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EHY0" FT /protein_id="CAQ78559.1" FT /translation="MVVSNMDAHRSTYAETHLRKPEIVMAPERLGAMHQNRISFVRSLI FT RKMAQQEWQVTKYEWQLSPQGFGHVIYKLVTPNDTYHLVVFCDEIADEERNDRVIAEKW FT DVTFALVLGEVNVDLLSQLRANVPLQEAGRNSNNVLVLARANKSVRVFDHLVSHLSRGE FT QPNQKELAEVGYILRTTAVYGNGKFGIADFKLLENNADFNQSFSAQMCAVYLLRQFSLD FT WVHYLATEQGGVNAVTLDRELQRYLGVGNATGLGMAPYLINHPCIVDQWMFAREMALSA FT VLNAPVIRERKEPLQTLLRKGVRHLQQVITINEHQDALNHRAVSELNELIASLDNIVAK FT SSTWEDVVTHSNGMSLEAQEMLLSCLMEIYPELVDRFEEQMNGNENLSLPSGKKIQDLI FT TTLEACYQWAIKTDFTKPENNYWFWYRSQDKEEPRLGVRGEEKGEDRELPLDIGRQVYR FT LYHALLKCEASMSLAEFLVEHPQYRAISRRVWTLGHKALGDIQMNVLHKSSLPMHLLRC FT KLAVFGATKFDPRSDRWVRVTFFQGAPLLDEVHDGEWLFPLLPNAGEGQ" FT CDS complement(976947..978521) FT /transl_table=11 FT /locus_tag="VSAL_I0875" FT /old_locus_tag="TVS0734" FT /product="glycine betaine transporter OpuD" FT /note="CDS is extended at the N-terminus in comparison to FT the Bacillus subtilis orthologue" FT /db_xref="GOA:B6EHY1" FT /db_xref="InterPro:IPR000060" FT /db_xref="UniProtKB/TrEMBL:B6EHY1" FT /protein_id="CAQ78560.1" FT /translation="MSDVTDNMKSSSKNSSIKENESTAEKLGLDNPALWYSGGFIALFV FT SLALVNAELLSTIVNSGFAWAVSVFGPYWQILLLLTFLIGLGLAAGRTGRVILGGIDKP FT EMDGFRWMAIIFCTLLAGGGVFWAAAEPIAHFVSAPPLYGAQENVQQAAVNALSQSFMH FT WGFLAWAIVGSLTSIVVMHLHYDKGLPLKPRILLYPLFGKRVLTGHTGALIDACCIVAV FT AAGTIGPIGFLGLQVSYALNALFDIPDGFTTQLIIILFAIALYTISALSGLNRGMQMLS FT RYNVILASALMIYVLVFGPTNFIVNGYIQGVGSMIDNFIPMATYRGDEGWLSWWTVFFW FT GWFLGYGPMMAIFIARISRGRSIRQLISTISIIAPLVTCFWFTIVGGSGLAFEIANPGS FT VSSAFEGFNLPGALLAVTSQLPMPMVTSILFLILTTIFIVTTGDSMTYTISVVISGETE FT PNAIIRTFWGVMMGVTALILISLGSGGISALQSFIVITAVPVSLILLPSLWDAPRIAMR FT MAKEQGL" FT misc_feature complement(976977..978425) FT /locus_tag="VSAL_I0875" FT /note="HMMPfam hit to PF02028, BCCT family FT transporter,score 1.8e-59" FT /inference="protein motif:HMMPfam:PF02028" FT misc_feature complement(order(976998..977066,977076..977144, FT 977205..977264,977367..977426,977460..977528, FT 977601..977669,977706..977774,977817..977885, FT 977973..978041,978132..978200,978261..978329, FT 978357..978425)) FT /locus_tag="VSAL_I0875" FT CDS complement(978620..979609) FT /transl_table=11 FT /locus_tag="VSAL_I0876" FT /old_locus_tag="TVS0735" FT /product="membrane dipeptidase" FT /db_xref="GOA:B6EHY2" FT /db_xref="InterPro:IPR008257" FT /db_xref="UniProtKB/TrEMBL:B6EHY2" FT /protein_id="CAQ78561.1" FT /translation="MYQQRIVIDGLQYCNWDREYFQTLKASGITAVHATMVYHENARET FT LSRFAEWNLRFEQNADLIMPVYSMADIELAKAEGKVGIFFGAQNCSPIDDEIGLVEVMR FT QQGLLIMQLTYNNQSLLATGCYEKNDTGITRFGQQVIEEMNRVGMIVDMSHSAERSTLE FT AIDLSSRPICISHANPSFAHDALRNKSDTVIKALAERGGLLGFSLYPFHLPNGSQCSLD FT DFCQMVATTADMVGIEHLGIGSDLCLNQPQEVLEWMRNGRWSKAMNYGEGSASNSGWPD FT ALPWFCGSAGMENIYNGLMRHGFSESEAGKVLGENWFNFLKQGLEPIS" FT misc_feature complement(978641..979594) FT /locus_tag="VSAL_I0876" FT /note="HMMPfam hit to PF01244, Membrane dipeptidase FT (Peptidase family, score 1.7e-103" FT /inference="protein motif:HMMPfam:PF01244" FT CDS complement(979666..981129) FT /transl_table=11 FT /locus_tag="VSAL_I0877" FT /old_locus_tag="TVS0736" FT /product="aldehyde dehydrogenase" FT /EC_number="1.2.1.3" FT /db_xref="GOA:B6EHY3" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="InterPro:IPR016163" FT /db_xref="UniProtKB/TrEMBL:B6EHY3" FT /protein_id="CAQ78562.1" FT /translation="MTVQAQNISAEKSLYIGGEWQSGISTIANINPSDISQHLGHFAQA FT SESQVQDAISAAKKAQPEWERTPLERKQAVLQAIGDELIARCDELGRLLSSEEGKPFME FT GRGEIYRAGQFFQYFAAEVLRQIGDSADSVRPGVSVEVTREAVGVIAVISPWNFPTATA FT AWKIAPALAFGNSVIWKPANLTPASAVALTEIIHRQGLPEGTFNLVLGNGSQVGNALIN FT SKEINGVSFTGSVDTGRKVATATAPNFVRCQLEMGSKNALVIADDADINIAVEATIAGS FT FSGAGQKCTASSRLVVMDGIHDAYVEALIKRMSQLKVGHALEEGVFMGPVVDGNQLDAN FT FGWMENARQSGAELAFGGERLSLEHEGYYMSPTLFINTSNKWEVNQEEVFAPMASVIRV FT ADLEEAIATTNDTRFGLTGGIITQSLRTSALFKQQAQTGCVMVNLPTAGTDYHVPFGGR FT KESSFGPREQGQYAKEFYTVVKTAYQRPY" FT misc_feature complement(979684..981072) FT /locus_tag="VSAL_I0877" FT /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase FT family, score 2.7e-183" FT /inference="protein motif:HMMPfam:PF00171" FT misc_feature complement(980251..980286) FT /locus_tag="VSAL_I0877" FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT /inference="protein motif:ProSite:PS00070" FT misc_feature complement(981010..981075) FT /locus_tag="VSAL_I0877" FT /note="Predicted helix-turn-helix motif with score FT 1104.000, SD 2.95 at aa 40-61, sequence FT EWQSGISTIANINPSDISQHLG" FT CDS complement(981216..981599) FT /transl_table=11 FT /locus_tag="VSAL_I0878" FT /old_locus_tag="TVS0737" FT /product="endoribonuclease L-PSP" FT /note="Expression may be stress-induced" FT /db_xref="InterPro:IPR006175" FT /db_xref="InterPro:IPR013813" FT /db_xref="UniProtKB/TrEMBL:B6EHY4" FT /protein_id="CAQ78563.1" FT /translation="MKKHSVKTDLFASKAPLEWAIVNNGTLYTAQIPIDQSGAVVEGGI FT EAQTHQTFKNLVHTLECAGESLDSVLQVLIYVTDRAYLATVNKVYAEYFNAPYPNRAAM FT IVAGLAREEMLVEFVVYAAVEPK" FT misc_feature complement(981228..981581) FT /locus_tag="VSAL_I0878" FT /note="HMMPfam hit to PF01042, Endoribonuclease L-PSP,score FT 2.1e-25" FT /inference="protein motif:HMMPfam:PF01042" FT CDS 981768..982646 FT /transl_table=11 FT /locus_tag="VSAL_I0879" FT /old_locus_tag="TVS0738" FT /product="transcriptional regulator, LysR-family" FT /db_xref="GOA:B6EHY5" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EHY5" FT /protein_id="CAQ78564.1" FT /translation="MSIKLQQLKHFTLVVEEGGFRAASGRANRSQAALSTSIKELERIL FT EQPLFEAGNKSKLTPFGEICFPKITQFLDVYDRLTNDLRADAAGQQGRVRIASVPSVAA FT KLIPSVLGAFSEKYPNVEVSLIDDNAAGVEARLLSGEVDLALGNYSQLEEKAIHFTPLI FT SDPIGVVCLKDNPIATHPEGIEWKTLLKQTFIRNGTCTLLNSTPARVLSEQALYSVENI FT TSLFSILELGIGITTLPKLAFPTNETRLVWIPLIDPPLERQIGIFQLADRTISPQAQQF FT YDLCIQYLNYK" FT misc_feature 981780..981956 FT /locus_tag="VSAL_I0879" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 2.1e-13" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature 981822..981914 FT /locus_tag="VSAL_I0879" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature 982026..982637 FT /locus_tag="VSAL_I0879" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 4.1e-37" FT /inference="protein motif:HMMPfam:PF03466" FT CDS 982878..983096 FT /transl_table=11 FT /locus_tag="VSAL_I0880" FT /old_locus_tag="TVS0739" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EHY6" FT /protein_id="CAQ78565.1" FT /translation="MPNIRMDELEVLINRNSTFEVTAINITQEGNHVIYREISLNDIGE FT RPIKDMHTGENISASEVCLFKKTINSK" FT CDS complement(983209..983985) FT /transl_table=11 FT /locus_tag="VSAL_I0881" FT /old_locus_tag="TVS0740" FT /product="putative exported protein" FT /db_xref="GOA:B6EHY7" FT /db_xref="InterPro:IPR003540" FT /db_xref="UniProtKB/TrEMBL:B6EHY7" FT /protein_id="CAQ78566.1" FT /translation="MFKTVVVIFFTFMSFLAQSEDFSEFKGRELTFFEEEKITENLMDW FT VKAHHVKAAKKLLPNEYSAMKAYGRVDHHIMNQFLRTGKSTDFLKLGIYESVKGKVDSL FT RGALNKLPNYRGTVYRGSSIKDSLLEKLNVGDILHEKAFLSTSTNSSFARNFSASATNE FT EVSLSAAQFKIDLKSSGRAISDYTFKPDEAEILVKPNTYFQVEAIERHSIEYNFIKLKE FT IKNPGRHLSIEPDVAIYDSFSGDEISLRSRSSLFCI" FT sig_peptide complement(983929..983985) FT /locus_tag="VSAL_I0881" FT CDS complement(984010..984765) FT /transl_table=11 FT /locus_tag="VSAL_I0882" FT /old_locus_tag="TVS0741" FT /product="putative exported protein" FT /db_xref="GOA:B6EHY8" FT /db_xref="InterPro:IPR003540" FT /db_xref="UniProtKB/TrEMBL:B6EHY8" FT /protein_id="CAQ78567.1" FT /translation="MKKYILLILWAWAAFTFASPFEVFKQPTRSKEAITELSEGFKDWS FT KSNANWKSKLLSNAEAEALEDFSISGYRTANQYLHAAETKSWGSSGREIKGFVRTLKSG FT LNKMPEYRGTTYRGTWSNKAMIEQLEVGDVMYESGFLSTSVIPEVARRFAVVPPNSGNR FT TVRALFHIETNRRSFSIASISDYSSEAEVVISPNSYFKVTGIERGALNNYISLETVLPR FT SVRMGSDRLFNLYSGEQLPPSRWQQMFCR" FT misc_feature complement(984694..984753) FT /locus_tag="VSAL_I0882" FT sig_peptide complement(984712..984765) FT /locus_tag="VSAL_I0882" FT CDS complement(984783..987374) FT /transl_table=11 FT /locus_tag="VSAL_I0883" FT /old_locus_tag="TVS0742" FT /product="putative exported protein" FT /note="Expression may be regulated by Fur. No significant FT database matches" FT /db_xref="UniProtKB/TrEMBL:B6EHY9" FT /protein_id="CAQ78568.1" FT /translation="MKLNNLMLVCSLLSTGASALELCRVGDEINVLDKESFNNLSKKNY FT RSFSDEIMPEDLFPKVPDHFSSLKPNLSEATHVYSDTSSLLETGPASSFAVETEEASRL FT LSTIGRSASEAGSAALEALGPIGEAAAVGLWARDVADTFEDESRTSYDRFATVMGLVDW FT FGVLKLPERAVDRYIISNRWDSMASGNHYSFTIYDDIVTQQDLRDKKHWAELASNQHRT FT LESIVKSYASDVALKYQLHYQETVKAQALLANELISAVDQELEKTLHFQLGINKEGSRL FT FSSDIASTCRTETDALFALYPNQQENNNRPPSVPSARVANRTLAALQHCQQYILDQAVT FT KLDEIRNGQLNGLNHLALTQLYTRTLNAKKKIAETADNHVRITSMKLQNSMKNDGLALI FT NRLFDSGSVEKANAFFKEQASRYAVDEMARSLLYRPATSRELSSKVLVLKETYKYCSSV FT GVLAGDPNFRGCLKYTWEPAETRRFDSSQDDVTSQIKMPLRETYYEVFATTLNLLIKEG FT WNSEVEEQWLEQQILDYSEQQNQMVQSRENKAEIYRWLFDSRAQLGSECIGERECSGWS FT SSYLAKENLSRTSSLAHIARWLADYSGRGAYIHRKRLEKLDELIKPALESDWKATQGSQ FT FYSYAYPSSFDMEKYAPLIASALKSSTLDVTNLSGNALPLAKGIVKSRLIEAVELGEQN FT GSDWLLSQVGDFQRYAAIVHSQHTSVGRHAPEMEETPVLFSEMLPAYILRYLVSDLIPD FT SYDARLVNSINALYDPSSELGQKITQLVDVNQTLNDRSNRTCDINFMPLKETLLAISGD FT ESLYWLSPISSWLDNLTRQQLTSQAVIGWGSRKQTEFGIECGISPNSLSYQ" FT misc_feature complement(986673..986741) FT /locus_tag="VSAL_I0883" FT /note="PS00334 Myb DNA-binding domain repeat signature 2." FT /inference="protein motif:ProSite:PS00334" FT sig_peptide complement(987318..987374) FT /locus_tag="VSAL_I0883" FT CDS complement(987481..987894) FT /transl_table=11 FT /locus_tag="VSAL_I0884" FT /old_locus_tag="TVS0743" FT /product="putative exported protein" FT /note="Expression may be regulated by Fur" FT /db_xref="UniProtKB/TrEMBL:B6EHZ0" FT /protein_id="CAQ78569.1" FT /translation="MKTMTFIGLVAFTTSISAFANAIVFPDSENNARIETEIVFPKDKT FT PVPLVGGYQIENGILTSRTYNCGINISDLDIEAKLQWNGATPQLLIVGVYPSSMCRAGF FT TGPRSVDLAEFIHSIPAHVLDRLVVANHSPLDL" FT misc_feature complement(987817..987885) FT /locus_tag="VSAL_I0884" FT sig_peptide complement(987829..987894) FT /locus_tag="VSAL_I0884" FT CDS complement(988174..988725) FT /transl_table=11 FT /gene="gmhB" FT /locus_tag="VSAL_I0885" FT /old_locus_tag="TVS0745" FT /product="D,D-heptose 1,7-bisphosphate phosphatase" FT /EC_number="3.1.3.-" FT /db_xref="GOA:B6EHZ1" FT /db_xref="InterPro:IPR004446" FT /db_xref="InterPro:IPR006543" FT /db_xref="InterPro:IPR006549" FT /db_xref="InterPro:IPR013954" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:B6EHZ1" FT /protein_id="CAQ78570.1" FT /translation="MSKPAIFIDRDGVINVDRGYVHKRDDFEYIDGVFDAVKICKDMGY FT LLVLVTNQSGIARGIFTEEQFETLTEWMDWNFAEHDIDFDGIYYCPHHPEATVEQYKEE FT CDCRKPNPGMFMSAQSFLDIDMEKSVMIGDKKEDMMAAQVAGVGTRILVRTGKPVTEEG FT EALATTVLDSIADVPKFLFA" FT CDS 988979..990013 FT /transl_table=11 FT /gene="metN" FT /locus_tag="VSAL_I0886" FT /old_locus_tag="TVS0746" FT /product="D-methionine transport ATP-binding protein MetN" FT /db_xref="GOA:B6EHZ2" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR012692" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017908" FT /db_xref="InterPro:IPR018449" FT /db_xref="UniProtKB/TrEMBL:B6EHZ2" FT /protein_id="CAQ78571.1" FT /translation="MIEINRVNKVFYQGAKEINALKDINLHIAQGTIFGVIGSSGAGKS FT TLIRCVNMLEKPTNGEVIVDGVDLTKLSSSELSKARRNIGMIFQHFNLLSSRTVFENVA FT LPLELAGKSKQEINKKVNDLLDLVGLSDKHHTYPANLSGGQKQRVAIARALSTDPKVLL FT CDEATSALDPATTKSILELIKDLNRKLSITILIITHEMEVVKNICHEVAIIGDGELVEK FT GIVSDIFAHPKTVLAQEFIRATLDLSIPDDFKTRLHDTYVEGSYPLIRLEFTGATVNAP FT VISQISREFNIDISILSSDIDYAGGVKFGLMLAEFFGNQESTKQAIEFLRNHHVKVEVL FT GYVV" FT misc_feature 989069..989629 FT /gene="metN" FT /locus_tag="VSAL_I0886" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 3.7e-71" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature 989090..989113 FT /gene="metN" FT /locus_tag="VSAL_I0886" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 989399..989443 FT /gene="metN" FT /locus_tag="VSAL_I0886" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT CDS 990003..990680 FT /transl_table=11 FT /gene="metI" FT /locus_tag="VSAL_I0887" FT /old_locus_tag="TVS0747" FT /product="D-methionine transport system permease protein FT MetI" FT /db_xref="GOA:B6EHZ3" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:B6EHZ3" FT /protein_id="CAQ78572.1" FT /translation="MSFDVISAWLDLNSKLLLNATGETLYMVSVAGIVGFAIGIPLGVI FT LHITKKGGLMENPAFNSILGAVVNMGRSVPFLVLMVAIIPVTKFIVGSFIGTTAAIVPL FT TIGAIPFVARLVEGALIEVPSGLVEAAQSMGATPLQIITKVLLPEALPMIVNSVTITLV FT TLVSYSAMAGTVGGGGLGDVAIRYGFHRYDLTIMAVTVVMLIVLVQIIQSIGDNLVKKV FT DHR" FT misc_feature 990063..990674 FT /gene="metI" FT /locus_tag="VSAL_I0887" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 4.5e-20" FT /inference="protein motif:HMMPfam:PF00528" FT misc_feature order(990075..990143,990186..990254,990267..990335, FT 990474..990542,990576..990644) FT /gene="metI" FT /locus_tag="VSAL_I0887" FT misc_feature 990360..990446 FT /gene="metI" FT /locus_tag="VSAL_I0887" FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT /inference="protein motif:ProSite:PS00402" FT CDS 990725..991534 FT /transl_table=11 FT /gene="metQ" FT /locus_tag="VSAL_I0888" FT /old_locus_tag="TVS0748" FT /product="D-methionine-binding lipoprotein MetQ precursor" FT /db_xref="InterPro:IPR004478" FT /db_xref="InterPro:IPR004872" FT /db_xref="UniProtKB/TrEMBL:B6EHZ4" FT /protein_id="CAQ78573.1" FT /translation="MVLNIKKLAAIAGLASTLILTGCGQEETNTNLIKVGVMAGAEAQV FT AEVAAKVAKEQYGLDVELVTFTDYVTPNAALDDGSIDLNAFQHKPYLDQQVADRGYKIE FT VAGNSFVYPIAGYSKQVTAVDQIEDGARIAVPNDPTNLGRSLLLLQEQGLITLRDGSGL FT AATVRDITANPKNITIVELDAAQLPRSLDDVALSVINTTYASSLNLTPEKDGIFVEDKD FT SPYVNLIVGRTDNVNTENVKTFVKAYQSEEVYQAALKTFKGGVVKGW" FT sig_peptide 990725..990802 FT /gene="metQ" FT /locus_tag="VSAL_I0888" FT misc_feature 990761..990793 FT /gene="metQ" FT /locus_tag="VSAL_I0888" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 990821..991531 FT /gene="metQ" FT /locus_tag="VSAL_I0888" FT /note="HMMPfam hit to PF03180, NLPA lipoprotein, score FT 1.1e-137" FT /inference="protein motif:HMMPfam:PF03180" FT CDS complement(991596..991733) FT /transl_table=11 FT /locus_tag="VSAL_I0889" FT /old_locus_tag="TVS0749" FT /product="50S ribosomal protein L36" FT /db_xref="GOA:B6EHZ5" FT /db_xref="InterPro:IPR000473" FT /db_xref="UniProtKB/Swiss-Prot:B6EHZ5" FT /protein_id="CAQ78574.1" FT /translation="MKVLSSLKSAKSRHKDCQIVKRKGRVFVICKTNPRFKAVQGKKKK FT " FT misc_feature complement(991611..991733) FT /locus_tag="VSAL_I0889" FT /note="HMMPfam hit to PF00444, Ribosomal protein L36,score FT 4.3e-06" FT /inference="protein motif:HMMPfam:PF00444" FT CDS complement(991733..991990) FT /transl_table=11 FT /gene="rpmE2" FT /locus_tag="VSAL_I0890" FT /old_locus_tag="TVS0750" FT /product="50S ribosomal protein L31 type B" FT /db_xref="GOA:B6EHZ6" FT /db_xref="InterPro:IPR002150" FT /db_xref="UniProtKB/Swiss-Prot:B6EHZ6" FT /protein_id="CAQ78575.1" FT /translation="MKEGIHPTYRKVLFHDTSVNKYFLIGSTLQTDRTMKWEDGKEYPY FT MTLDISSESHPFYTGEQRVVSTEGRVANFNRRFGALKGKV" FT misc_feature complement(991748..991990) FT /gene="rpmE2" FT /locus_tag="VSAL_I0890" FT /note="HMMPfam hit to PF01197, Ribosomal protein L31,score FT 5.2e-18" FT /inference="protein motif:HMMPfam:PF01197" FT CDS 992134..992832 FT /transl_table=11 FT /locus_tag="VSAL_I0891" FT /old_locus_tag="TVS0751" FT /product="conserved hypothetical protein" FT /note="Expression may be regulated by Fur" FT /db_xref="InterPro:IPR001378" FT /db_xref="InterPro:IPR023368" FT /db_xref="InterPro:IPR023370" FT /db_xref="UniProtKB/TrEMBL:B6EHZ7" FT /protein_id="CAQ78576.1" FT /translation="MTYHIDPVGFIQSPYKEKFAVPRQPRLVPSATSRLKLVGDANSPE FT AVRGIEQFSHLWLLFLFDQNLEAGWRPTVRPPRLGGNERIGVFASRATFRPNGIGMSAV FT ELKGVIQEGNQTYLELGSVDLVDSTPIIDIKPYIPYSDSIPTALGGFAEKEPDVLNVYL FT SIEAQKSLASHPQKSHIEAVIKEVLGQDPRPAYKKGKVDTKEYAVNLFDLNVKFTVDSN FT SITVTAIDRF" FT misc_feature 992182..992562 FT /locus_tag="VSAL_I0891" FT /note="HMMPfam hit to PF01980, Uncharacterised protein FT family UPF0066, score 1.8e-49" FT /inference="protein motif:HMMPfam:PF01980" FT misc_feature 992389..992424 FT /locus_tag="VSAL_I0891" FT /note="PS01318 Uncharacterized protein family UPF0066 FT signature." FT /inference="protein motif:ProSite:PS01318" FT CDS 992979..994694 FT /transl_table=11 FT /gene="proS" FT /locus_tag="VSAL_I0892" FT /old_locus_tag="TVS0752" FT /product="prolyl-tRNA synthetase" FT /EC_number="6.1.1.15" FT /db_xref="GOA:B6EHZ8" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR002316" FT /db_xref="InterPro:IPR004154" FT /db_xref="InterPro:IPR004500" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR007214" FT /db_xref="InterPro:IPR023717" FT /db_xref="UniProtKB/Swiss-Prot:B6EHZ8" FT /protein_id="CAQ78577.1" FT /translation="MRTSKYLLSTLKETPNDAEVVSHQLMLRAGMIRRLASGLYTWLPT FT GLRVLRKVENIVRQEIDNAGAIETLMPVVQPFELWEETGRSEEMGPELLRFTDRHARPF FT VLSPTAEEVITSLVRNEVNSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSF FT DIDKEGLQKSYDAMHDAYCRAFDRMGLEYRPVLADSGAIGGSGSQEFHVLAESGEDLIA FT FSTESDYAANIEKAEALAPTTERAAPTQEMTTVDTPNAKTIAELVEQHGIAIEKTVKTL FT FVKASDEVDADIIALIIRGDHELNEVKAENLPHVLSPLEMADEAQLRDLIGAGAGSLGP FT VGLELPFIVDRSVAVMSDFSTGANIDGKHFFGVNWDRDVQLGQIEDLRSVVEGDLSPCG FT QGTLQLKRGIEVGHIFQLGTAYSEAMNCGVLDANGKNSILEMGCYGIGVSRVVASAIEQ FT NNDEYGIVWPEALAPFTVAIVPMNMYKSDRVKEAAEKLYAELTAMGIDVLFDDRKERPG FT VMFKDIELIGIPHTVVIGDRSMDEGNFEYKNRRANSKEVIEIANIVEHIKAQLS" FT misc_feature 993123..993635 FT /gene="proS" FT /locus_tag="VSAL_I0892" FT /note="HMMPfam hit to PF00587, tRNA synthetase class II FT core domain (, score 7.3e-55" FT /inference="protein motif:HMMPfam:PF00587" FT misc_feature 993393..993455 FT /gene="proS" FT /locus_tag="VSAL_I0892" FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT /inference="protein motif:ProSite:PS00179" FT misc_feature 993726..994139 FT /gene="proS" FT /locus_tag="VSAL_I0892" FT /note="HMMPfam hit to PF04073, YbaK / prolyl-tRNA FT synthetases associa, score 5.3e-07" FT /inference="protein motif:HMMPfam:PF04073" FT misc_feature 994401..994685 FT /gene="proS" FT /locus_tag="VSAL_I0892" FT /note="HMMPfam hit to PF03129, Anticodon binding FT domain,score 1e-23" FT /inference="protein motif:HMMPfam:PF03129" FT CDS complement(994766..995236) FT /transl_table=11 FT /locus_tag="VSAL_I0893" FT /old_locus_tag="TVS0753" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR004375" FT /db_xref="UniProtKB/TrEMBL:B6EHZ9" FT /protein_id="CAQ78578.1" FT /translation="MIYGHIEHQVTNQYLPPVIQQCLTYLNETDLARLTTGKHIIDGER FT IFANVMEFDTGFANDKQAEVHKEYIDVQCLIHGEERIQYSLENEVNPIAKAYDEENDFY FT LVESMHQCSEVIMHPKMFAIFFPEEPHKPGCLVEQSMPIKKIVIKVHRSLLS" FT misc_feature complement(994778..995236) FT /locus_tag="VSAL_I0893" FT /note="HMMPfam hit to PF04074, Domain of unknown function FT (DUF386), score 4.2e-57" FT /inference="protein motif:HMMPfam:PF04074" FT CDS complement(995293..996786) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0894" FT /old_locus_tag="TVS0754" FT /product="sodium/solute symporter (fragment)" FT /note="Similar to Vibrio fischeri Sodium-glucose/galactose FT cotransporter UniProt:Q5E733 (505 aa) fasta scores: FT E()=8.5e-163, 93.159% id in 497 aa. CDS is truncated by the FT insertion of the upstream IS element and subsequent FT recombination events" FT /inference="similar to sequence:UniProt:Q5E733" FT misc_feature complement(order(995374..995442,995455..995511, FT 995530..995598,995626..995694,995800..995868, FT 995911..995973,996067..996126,996184..996252, FT 996271..996339,996382..996450,996511..996579, FT 996622..996690,996724..996777)) FT /locus_tag="VSAL_I0894" FT misc_feature complement(995485..996699) FT /locus_tag="VSAL_I0894" FT /note="HMMPfam hit to PF00474, Sodium:solute symporter FT family, score 4.3e-10" FT /inference="protein motif:HMMPfam:PF00474" FT repeat_region 996789..999068 FT /note="VSa2" FT repeat_region 996789..996812 FT /note="IR of VSa2" FT CDS 996870..997184 FT /transl_table=11 FT /locus_tag="VSAL_I0895" FT /old_locus_tag="TVS0755" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EI00" FT /protein_id="CAQ78580.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCSNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 997181..997528 FT /transl_table=11 FT /locus_tag="VSAL_I0896" FT /old_locus_tag="TVSb0003" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78581.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS join(997600..997809,997808..999052) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0897" FT /old_locus_tag="TVS0759" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. Transposase IS66 FT UniProt:A1RLT8 (500 aa) fasta scores: E()=6.6e-110, 56.2% FT id in 493 aa overlap. CDS contains a frameshift after codon FT 70" FT /db_xref="PSEUDO:CAQ78582.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT repeat_region 999045..999068 FT /note="IR of VSa2" FT CDS complement(999132..1000010) FT /transl_table=11 FT /locus_tag="VSAL_I0898" FT /old_locus_tag="TVS0760" FT /product="HTH-type transcriptional regulator, rpiR family" FT /note="Expression may be stress-induced. Probably regulator FT of genes involved in synthesis of phosphosugars" FT /db_xref="GOA:B6EI03" FT /db_xref="InterPro:IPR000281" FT /db_xref="InterPro:IPR001347" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EI03" FT /protein_id="CAQ78583.1" FT /translation="MSNHHIQIKAGNIIDMIGSLYNSLTPSSKRIADYVMANATQVSKH FT SIAELSQIVNAGDATIIRFCRTLGFKGYQDFKMELAIEVSNLQGREKEIFDTDVTAEDN FT AEVIGHKLQATIESVLSETMNLLNFQSLELVAEALKDAKAIYFFGVGSSGLTAESAKHK FT FMRIGLNVDAFTNNHFMYVKSSLMQPGDFAVGISHSGCSVETTKALRLAKDNGATTIAI FT THNPRSDITKYSDYVLVNGNRQGQLQGDSIGTKISQLFVLDLIYTLLVKRDINGAKANK FT LKTTEALCHKS" FT misc_feature complement(999198..999605) FT /locus_tag="VSAL_I0898" FT /note="HMMPfam hit to PF01380, SIS domain, score 2.1e-19" FT /inference="protein motif:HMMPfam:PF01380" FT misc_feature complement(999651..999980) FT /locus_tag="VSAL_I0898" FT /note="HMMPfam hit to PF01418, Helix-turn-helix domain,rpiR FT family, score 7.2e-26" FT /inference="protein motif:HMMPfam:PF01418" FT misc_feature complement(999813..999878) FT /locus_tag="VSAL_I0898" FT /note="Predicted helix-turn-helix motif with score 984.000, FT SD 2.54 at aa 45-66, sequence HSIAELSQIVNAGDATIIRFCR" FT CDS 1000299..1001192 FT /transl_table=11 FT /locus_tag="VSAL_I0899" FT /old_locus_tag="TVS0761" FT /product="dihydropicolinate synthase" FT /EC_number="4.1.3.3" FT /db_xref="GOA:B6EI04" FT /db_xref="InterPro:IPR002220" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR020624" FT /db_xref="UniProtKB/TrEMBL:B6EI04" FT /protein_id="CAQ78584.1" FT /translation="MKKLTGLIAAPHTPFDSSSNVNFEEIDKIAKHLINDGVKGIYVCG FT TTGEGIHCSVEERKAIAERWVSACNHKLDIIVHTGALSIVDTLELTRHADTLDILATSA FT IGPCFFKPGSVSDLVEYCATIAAAAPSKGFYYYHSGMSGVNLNMEEFLIQADKRIPNLS FT GLKFNSGDLYEYQRCLRACDGKFDVPFGVDEFLPGALAVGAKSAVGSTYNYAAPHFNSI FT IEAFNKGDHDAVFNKMTNVIELIRVLVEFGGVAAGKIAMELHDINAGDPRLPLMPLSAE FT QKLTVVEKMRAANFLK" FT misc_feature 1000305..1001180 FT /locus_tag="VSAL_I0899" FT /note="HMMPfam hit to PF00701, Dihydrodipicolinate FT synthetase family, score 7.6e-33" FT /inference="protein motif:HMMPfam:PF00701" FT misc_feature 1000416..1000469 FT /locus_tag="VSAL_I0899" FT /note="PS00665 Dihydrodipicolinate synthetase signature 1." FT /inference="protein motif:ProSite:PS00665" FT CDS 1001328..1001546 FT /transl_table=11 FT /locus_tag="VSAL_I0900" FT /old_locus_tag="TVS0762" FT /product="conserved hypothetical protein" FT /note="Expression may be regulated by Fur" FT /db_xref="InterPro:IPR009624" FT /db_xref="UniProtKB/TrEMBL:B6EI05" FT /protein_id="CAQ78585.1" FT /translation="MESIMKVYDCCDMVRELYSLIGSGDQGYIPQAINCAVKSLNDIAA FT DDSLPKETREKAAFAAANLLISDFEDA" FT misc_feature 1001340..1001543 FT /locus_tag="VSAL_I0900" FT /note="HMMPfam hit to PF06786, Uncharacterised protein FT family (UPF0253), score 1.5e-38" FT /inference="protein motif:HMMPfam:PF06786" FT CDS 1001546..1001734 FT /transl_table=11 FT /locus_tag="VSAL_I0901" FT /old_locus_tag="TVS0763" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EI06" FT /protein_id="CAQ78586.1" FT /translation="MTPEKVASMDPIMLMSIVNMKIRDEFGDLHCFVKFYELDQDALIK FT RLADAGFDYLEEAKQFR" FT CDS 1002234..1003832 FT /pseudo FT /transl_table=11 FT /gene="chiA" FT /locus_tag="VSAL_I0902" FT /old_locus_tag="TVS0764" FT /product="chitinase A (fragment)" FT /note="Similar to Vibrio harveyi Chitinase A ChiA FT UniProt:P96168 (729 aa) fasta scores: E()=4.7e-136,67.232% FT id in 531 aa. CDS is truncated by the insertion of the FT downstream IS element and subsequent recombination events" FT /inference="similar to sequence:UniProt:P96168" FT misc_feature 1002342..1003202 FT /gene="chiA" FT /locus_tag="VSAL_I0902" FT /note="HMMPfam hit to PF00704, Glycosyl hydrolases FT family,score 1.3e-19" FT /inference="protein motif:HMMPfam:PF00704" FT misc_feature 1002684..1002710 FT /gene="chiA" FT /locus_tag="VSAL_I0902" FT /note="PS01095 Chitinases family 18 active site." FT /inference="protein motif:ProSite:PS01095" FT misc_feature 1002690..1002731 FT /gene="chiA" FT /locus_tag="VSAL_I0902" FT /note="PS01039 Bacterial extracellular solute-binding FT proteins, family 3 signature." FT /inference="protein motif:ProSite:PS01039" FT misc_feature 1003545..1003754 FT /gene="chiA" FT /locus_tag="VSAL_I0902" FT /note="HMMPfam hit to PF07523, no description, score 0.012" FT /inference="protein motif:HMMPfam:PF07523" FT repeat_region 1003833..1006144 FT /note="VSa2" FT repeat_region 1003833..1003856 FT /note="IR of VSa2" FT CDS 1003914..1004228 FT /transl_table=11 FT /locus_tag="VSAL_I0903" FT /old_locus_tag="TVS0765" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78588.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 1004225..1004572 FT /transl_table=11 FT /locus_tag="VSAL_I0904" FT /old_locus_tag="TVSb0005" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78589.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS join(1004644..1005093,1005097..1005126,1005130..1006128) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0905" FT /old_locus_tag="TVS0768" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. Transposase IS66 FT UniProt:A1RLT8 (500 aa) fasta scores: E()=5.8e-104, 51.6% FT id in 502 aa. CDS is disrupted by stop codons after codon FT 150 (TAA) and codon 161 (TAA)" FT /db_xref="PSEUDO:CAQ78590.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT repeat_region 1006121..1006144 FT /note="IR of VSa2" FT CDS complement(1006147..1007619) FT /pseudo FT /transl_table=11 FT /gene="fadD" FT /locus_tag="VSAL_I0906" FT /old_locus_tag="TVS0769" FT /product="long-chain-fatty-acid-CoA ligase (fragment)" FT /EC_number="6.2.1.3" FT /note="Similar to Escherichia coli FT Long-chain-fatty-acid--CoA ligase FadD UniProt:P69451 (561 FT aa) fasta scores: E()=9.5e-138, 74.180% id in 488 aa. CDS FT is truncated by the insertion of the downstream IS element FT and subsequent recombination events" FT /inference="similar to sequence:UniProt:P69451" FT misc_feature complement(1006165..1007472) FT /gene="fadD" FT /locus_tag="VSAL_I0906" FT /note="HMMPfam hit to PF00501, AMP-binding enzyme, score FT 3.1e-128" FT /inference="protein motif:HMMPfam:PF00501" FT misc_feature complement(1006954..1006989) FT /gene="fadD" FT /locus_tag="VSAL_I0906" FT /note="PS00455 Putative AMP-binding domain signature." FT /inference="protein motif:ProSite:PS00455" FT misc_feature complement(1007098..1007145) FT /gene="fadD" FT /locus_tag="VSAL_I0906" FT /note="PS00038 Myc-type, 'helix-loop-helix' dimerization FT domain signature." FT /inference="protein motif:ProSite:PS00038" FT CDS complement(1007807..1008676) FT /transl_table=11 FT /locus_tag="VSAL_I0907" FT /old_locus_tag="TVS0770" FT /product="putative hydrolase" FT /db_xref="GOA:B6EI10" FT /db_xref="InterPro:IPR000073" FT /db_xref="UniProtKB/TrEMBL:B6EI10" FT /protein_id="CAQ78592.1" FT /translation="MHAFHQYDLSLHHGSLAVIELGPNNADNVVLFLHGWQDNAATFLS FT TMTAFSVSNPTCRLIAFDWFGHGLSDHKGVDHFYHFFDYVDDLHQAILSLKLDSVILVG FT HSLGGLIASAYSAAFPEKVAALMMIEALGPLSEEAEKTSERLREGVLSRQRYRHKPQRT FT LKDRQAALALRSKVNQLPEVLLEPIMQRAVRSTSDGVQWTTDAKVKCESLYRMSEAHAL FT ALLSDITCPVIVIIGVDGYEHLKQKEHRYSYIQHVESFQIEGGHHCHLQHPEKISTYLN FT VLFNKINT" FT misc_feature complement(1007831..1008508) FT /locus_tag="VSAL_I0907" FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase FT fold,score 1e-15" FT /inference="protein motif:HMMPfam:PF00561" FT misc_feature complement(1008002..1008607) FT /locus_tag="VSAL_I0907" FT /note="HMMPfam hit to PF07819, PGAP1-like protein, score FT 0.00093" FT /inference="protein motif:HMMPfam:PF07819" FT misc_feature complement(1008350..1008379) FT /locus_tag="VSAL_I0907" FT /note="PS00120 Lipases, serine active site." FT /inference="protein motif:ProSite:PS00120" FT CDS complement(1008683..1009240) FT /transl_table=11 FT /locus_tag="VSAL_I0908" FT /old_locus_tag="TVS0771" FT /product="outer membrane lipoprotein, Slp family" FT /db_xref="GOA:B6EI11" FT /db_xref="InterPro:IPR004658" FT /db_xref="InterPro:IPR012640" FT /db_xref="UniProtKB/TrEMBL:B6EI11" FT /protein_id="CAQ78593.1" FT /translation="MIMKRSLFLLCALFLAGCSSLPTELESNQENTIVTYTPFSDASES FT GSVVAVRLGGVIARIDNQAEKTRIEVVNLPISSAGKPDISEEPNGRFVVYMDGFVDLIA FT YAKGRLITVLGKTASIEKGNVGDYEYSFPVINGSALHLWQIQEYVVTNDFDMDYMPCRG FT TRCMYQRSHIDTRRGKVVQEVQ" FT misc_feature complement(1008731..1009198) FT /locus_tag="VSAL_I0908" FT /note="HMMPfam hit to PF03843, Outer membrane lipoprotein FT Slp family, score 2.8e-45" FT /inference="protein motif:HMMPfam:PF03843" FT sig_peptide complement(1009160..1009240) FT /locus_tag="VSAL_I0908" FT misc_feature complement(1009187..1009219) FT /locus_tag="VSAL_I0908" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1009256..1009555) FT /transl_table=11 FT /locus_tag="VSAL_I0909" FT /old_locus_tag="TVS0772" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EI12" FT /protein_id="CAQ78594.1" FT /translation="MVSIQGLPPALIQKQQAVGKKNQVKKAGGDKASVSQPSQVAKAVT FT NHIKHLDASAYADSRLQYDLPEGRNRHAMEEYMDIMLQKRRDELAQLVGVDLYI" FT CDS complement(1009618..1010319) FT /transl_table=11 FT /locus_tag="VSAL_I0910" FT /old_locus_tag="TVS0773" FT /product="glycoprotease" FT /db_xref="GOA:B6EI13" FT /db_xref="InterPro:IPR000905" FT /db_xref="InterPro:IPR022496" FT /db_xref="UniProtKB/TrEMBL:B6EI13" FT /protein_id="CAQ78595.1" FT /translation="MSVKILAVDTATENCSVALIIDGKVHSRSAVAPREHTIKILPFVD FT EVLKEAGVRLQDLDALAFGQGPGSFTGVRIGIGIAQGLAFGADLPMIGISTLEAMAQAA FT YRIHGATQIAGAIDARMSEVYFGMYQRNDDATWSPLVSDMVSVPAELAAKLPDQTGEWL FT TVGTGWDAYPDALETLPLETKASDILYPEAQDMAILALQKFEQGLAVPVEESTPVYVRD FT TVTWKKLPGRE" FT misc_feature complement(1009633..1010250) FT /locus_tag="VSAL_I0910" FT /note="HMMPfam hit to PF00814, Glycoprotease family, score FT 2.2e-54" FT /inference="protein motif:HMMPfam:PF00814" FT CDS complement(1010327..1012282) FT /transl_table=11 FT /locus_tag="VSAL_I0911" FT /old_locus_tag="TVS0774" FT /product="putative ATP-dependent helicase" FT /EC_number="3.6.1.-" FT /note="Similar to Escherichia coli Probable ATP-dependent FT helicase YoaA UniProt:P76257 (636 aa) fasta scores: FT E()=5.9e-163, 65.714% id in 630 aa" FT /db_xref="GOA:B6EI14" FT /db_xref="InterPro:IPR006555" FT /db_xref="InterPro:IPR010614" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014013" FT /db_xref="UniProtKB/TrEMBL:B6EI14" FT /inference="similar to sequence:UniProt:P76257" FT /protein_id="CAQ78596.1" FT /translation="MIAKIFSSSGALGKAIPGFQPRQPQLDMAHAVHAAIKDGTQLVVE FT AGTGTGKTFAYLVPALISGKKTIISTGSKNLQEQLFHRDLPLMTSSLGFYGQVALLKGR FT SNYLCPERLNQQLVESHTPQADPELLTQLVKVRAWSSETKTGDLGDCTAIAEDSPIIPS FT ITSTNDNCLGKDCPSFDECFVVKARKKAMDADVVVVNHHLFLADLAIKETGFGELIPEA FT DIFIFDEAHQLPDIASQYFGQNLSSRQLTELAKDIEIGYRTEARDMRQLQKVAERLAGA FT AMDLRIVLGEPGFRGNWREAIKSAAVQREIVRINDAFELAHDVLKLALGRSQLLDAAFD FT RCALLKNRLERVCDTTIGGYSYWFECTPRHFSLNITPLSVADKFKEQVADKEGAWIFTS FT ATLGVNDDFSHFTERLGLEPTKQFSLPSPFDYQTQALLCVPRFLPEPNSHGIANKLVEL FT LLPVIKQNNGRCFFLCTSHQMMRDLAGQFREMLDLPVLMQGETTKQKLLAEFMELGNAL FT LVATGAFWEGIDVRGDALSCVIIDKLPFTAPDDPLLKARIEDCQLSGGDAFSQVQIPDA FT VITLKQGVGRLIRDTKDKGVLIICDNRLVTRPYGATFLQSLPPIPRTRDLKNVSEFLAK FT ADQHKKLEKQEVILEN" FT misc_feature complement(1012124..1012147) FT /locus_tag="VSAL_I0911" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1012702..1013535 FT /transl_table=11 FT /gene="purU" FT /locus_tag="VSAL_I0912" FT /old_locus_tag="TVS0775" FT /product="formyltetrahydrofolate deformylase" FT /EC_number="3.5.1.10" FT /db_xref="GOA:B6EI15" FT /db_xref="InterPro:IPR002376" FT /db_xref="InterPro:IPR002912" FT /db_xref="InterPro:IPR004810" FT /db_xref="UniProtKB/TrEMBL:B6EI15" FT /experiment="The expressed protein is found to be exported FT (extracellular) by Aliivibrio salmonicida" FT /protein_id="CAQ78597.1" FT /translation="MEKKILLTDCPDSRGLIAKITNICYKHQLNIVHNNEYVDNVTGQF FT FMRTELEGIFNDETFLLDIDQALPPGSQRKLVLEPKKKVVILVTKEAHCIGDILIKAYS FT GAMNIEISAVIGNHDTLGALIEKFDIPFHYVSHEGLSRGEHEDKMLSIIHSYDPEYVVL FT AKYMRVLTPEFVEQFPKRIINIHHSFLPAFIGAKPYQQAYDRGVKIIGATAHFVTNNLD FT EGPIIKQDVIPIDHNFSAEDMAMAGRDVEKSVLSKALTKVLNDHVFVYGNKTVIL" FT misc_feature 1012711..1012956 FT /gene="purU" FT /locus_tag="VSAL_I0912" FT /note="HMMPfam hit to PF01842, ACT domain, score 0.00082" FT /inference="protein motif:HMMPfam:PF01842" FT misc_feature 1012945..1013478 FT /gene="purU" FT /locus_tag="VSAL_I0912" FT /note="HMMPfam hit to PF00551, Formyl transferase, score FT 8.5e-57" FT /inference="protein motif:HMMPfam:PF00551" FT CDS complement(1013608..1014405) FT /transl_table=11 FT /locus_tag="VSAL_I0913" FT /old_locus_tag="TVS0776" FT /product="putative hydrolytic enzyme" FT /db_xref="GOA:B6EI88" FT /db_xref="InterPro:IPR000639" FT /db_xref="UniProtKB/TrEMBL:B6EI88" FT /protein_id="CAQ78598.1" FT /translation="MSNSLLFHKTYEHESSSKWVVFVHGAGGSSTTWFKQIAAFRKNFN FT ILLIDLRGHGRSSHFSQLKEFINKQYSFKVVSQDIIDVLDHLNIKSAHFVGMSLGTIII FT RNLAELAQDRVSSMVLAGAITRFNFRSQFLIKMGDITKNIMPYMWLYKLFAYVVMPQKS FT QKESRHIFTREAKKLCQKEFKRWFKLAADVNPLMRCFKDKELPIPTLYVMGENDYMFMK FT PVQEMVAVHEHSHLLQIPECGHVCNIDRPREFNKHAIEFITAQ" FT misc_feature complement(1013626..1014276) FT /locus_tag="VSAL_I0913" FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase FT fold,score 1.4e-08" FT /inference="protein motif:HMMPfam:PF00561" FT CDS complement(1014523..1014720) FT /transl_table=11 FT /locus_tag="VSAL_I0914" FT /old_locus_tag="TVS0777" FT /product="hypothetical protein" FT /note="No significant database matches. Doubtful CDS, poor FT translational start site" FT /db_xref="UniProtKB/TrEMBL:B6EI89" FT /protein_id="CAQ78599.1" FT /translation="MIAQLVSQINILQFDGLDEYDFYETNALFVLNCYIEKEQGSLAYI FT DYFNSIYRVITLNLTKKSIT" FT CDS 1014975..1015133 FT /transl_table=11 FT /locus_tag="VSAL_I0915" FT /old_locus_tag="TVS0778" FT /product="membrane protein" FT /db_xref="GOA:B6EI90" FT /db_xref="InterPro:IPR000612" FT /db_xref="UniProtKB/TrEMBL:B6EI90" FT /protein_id="CAQ78600.1" FT /translation="MNKLVLIILCVLLPPVGVFFAKGVGKDLLINIILTVFFWIPGVIH FT GLWIATR" FT sig_peptide 1014975..1015037 FT /locus_tag="VSAL_I0915" FT misc_feature 1014978..1015130 FT /locus_tag="VSAL_I0915" FT /note="HMMPfam hit to PF01679, Uncharacterized protein FT family UPF0057, score 5.1e-21" FT /inference="protein motif:HMMPfam:PF01679" FT misc_feature order(1014984..1015037,1015056..1015124) FT /locus_tag="VSAL_I0915" FT CDS complement(1015203..1015631) FT /pseudo FT /transl_table=11 FT /gene="metE" FT /locus_tag="VSAL_I0916" FT /old_locus_tag="TVS0779" FT /product="5-methyltetrahydropteroyltriglutamate--homocyst FT eine methyltransferase (methionine synthase, vitamin-b12 FT independent isozyme (cobalamin-independent methionine FT synthase) (fragment)" FT /EC_number="2.1.1.14" FT /note="Similar to Vibrio harveyi FT 5-methyltetrahydropteroyltriglutamate--homocysteine FT methyltransferase MetE UniProt:Q8KRG6 (760 aa) fasta FT scores: E()=5.1e-42, 86.667% id in 135 aa. CDS is truncated FT by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:Q8KRG6" FT misc_feature complement(1015236..1015559) FT /gene="metE" FT /locus_tag="VSAL_I0916" FT /note="HMMPfam hit to PF01717, Cobalamin-independent FT synthase, Catalytic, score 1.7e-06" FT /inference="protein motif:HMMPfam:PF01717" FT repeat_region complement(1015633..1016637) FT /note="VSa6" FT repeat_region complement(1015633..1015651) FT /note="IR of VSa6" FT CDS complement(1015660..1016541) FT /transl_table=11 FT /locus_tag="VSAL_I0917" FT /old_locus_tag="TVS0780" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ78602.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature complement(1015720..1016214) FT /locus_tag="VSAL_I0917" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(1016619..1016637) FT /note="IR of VSa6" FT CDS 1016646..1017515 FT /pseudo FT /transl_table=11 FT /gene="acfD" FT /locus_tag="VSAL_I0918" FT /old_locus_tag="TVS0781" FT /product="accessory colonization factor AcfD precursor FT (fragment)" FT /note="Similar to Vibrio cholerae Accessory colonization FT factor AcfD precursor UniProt:Q9KTQ4 (1520 aa) fasta FT scores: E()=2.9e-47, 44.558% id in 294 aa. CDS is truncated FT by the insertion of the upstream IS element and subsequent FT recombination events" FT /db_xref="PSEUDO:CAQ78603.1" FT /inference="similar to sequence:UniProt:Q9KTQ4" FT misc_feature 1016871..1016900 FT /gene="acfD" FT /locus_tag="VSAL_I0918" FT /note="PS00142 Neutral zinc metallopeptidases,zinc-binding FT region signature." FT /inference="protein motif:ProSite:PS00142" FT CDS complement(1017599..1017925) FT /transl_table=11 FT /locus_tag="VSAL_I0919" FT /old_locus_tag="TVS0782" FT /product="putative lipoprotein" FT /db_xref="UniProtKB/TrEMBL:B6EI93" FT /protein_id="CAQ78604.1" FT /translation="MKKISLACAFALVLAGCSSAPKQQDNYQDASFELCNTEVKVYSVS FT DDGRVRIICSDGSKFQLNTEKTLDVMRDINVDYCTGEGLGKFNETSRYYTFQCKSGALI FT NINK" FT sig_peptide complement(1017860..1017925) FT /locus_tag="VSAL_I0919" FT misc_feature complement(1017875..1017907) FT /locus_tag="VSAL_I0919" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1018025..1020013) FT /transl_table=11 FT /locus_tag="VSAL_I0920" FT /old_locus_tag="TVS0783" FT /product="nitrate and nitrite sensing methyl-accepting FT chemotaxis protein" FT /db_xref="GOA:B6EI94" FT /db_xref="InterPro:IPR004089" FT /db_xref="InterPro:IPR013587" FT /db_xref="UniProtKB/TrEMBL:B6EI94" FT /protein_id="CAQ78605.1" FT /translation="MKLSILKSIKTRLLLISLLPTLIITLFLTQLLIQENQKVHDANYS FT LEAVSLFNLLDNVAHNFAVERGITAGYLASQGKSGNSKLIEQRKKSDTAEQALRNFTPN FT FLEKTIVSSLLFEVTQQLNNKNSIRSQVDNFSITHSPFVYYSTLNQLSLDSISIIVSKI FT NSPILRSEMQGLSALLQVKEEAGKVRGALNGAFAGKTSSLDKYADISSYLSTEYFSIRQ FT AKSILSADFVQQLNNAMSSNTWKKVTDTQSIYLSQKNTLATLQGPSANVWFPMATQRIG FT LIKTITDNLSKSLNIAATKEMSQSAFIRNGYIAVALCLILPIIFISFFTAKSINSRMTS FT FSLRINEISASKNLTLTLENNNENKFDAIARDINSLLENIALPLRSAHNVASQTQNELN FT LLSEHLKQATQSSQTTLTHCDSIATAMTEMAQTSSEIAGVTNSAHETTTQATANATECK FT NQTLATTETVNELHSSIINTHQHVEHLEKQTLNVSEILDTITAVSDQTNLLALNAAIEA FT ARAGEQGRGFAVVADEVRKLAQRSQEATHDIRQLLDGIGVNAKQSFLLMEESKLLSETT FT QDSVTDSAQYIESLSHSVSEIDNFNTSISAATLEQSETANAVNTDIDELASLANSTNEL FT IHHLEHEMKQLETKMSELTTQINTITV" FT misc_feature complement(1018031..1018801) FT /locus_tag="VSAL_I0920" FT /note="HMMPfam hit to PF00015, Methyl-accepting chemotaxis FT protein (MCP) s, score 1.7e-40" FT /inference="protein motif:HMMPfam:PF00015" FT misc_feature complement(order(1019021..1019080,1019918..1019977)) FT /locus_tag="VSAL_I0920" FT misc_feature complement(1019120..1019851) FT /locus_tag="VSAL_I0920" FT /note="HMMPfam hit to PF08376, Nitrate and nitrite sensing, FT score 2.4e-60" FT /inference="protein motif:HMMPfam:PF08376" FT sig_peptide complement(1019927..1020013) FT /locus_tag="VSAL_I0920" FT CDS 1020181..1020630 FT /transl_table=11 FT /gene="ribx" FT /locus_tag="VSAL_I0921" FT /old_locus_tag="TVS0784" FT /product="putative rib operon regulator RibX" FT /db_xref="GOA:B6EI95" FT /db_xref="InterPro:IPR003796" FT /db_xref="InterPro:IPR005144" FT /db_xref="UniProtKB/Swiss-Prot:B6EI95" FT /protein_id="CAQ78606.1" FT /translation="MHCPFCSATDTKVIDSRLVSDGHQVRRRRQCLACSERFTTFESAE FT LVMPKVIKSNGNREPFDEDKLSGGLYRSLEKRPVSADLVELALNTIKSKLRATGEREVP FT SEMIGNFVMDQLKELDKVAYIRFASVYRSFEDIKEFGEEIAKLEK" FT misc_feature 1020325..1020597 FT /gene="ribx" FT /locus_tag="VSAL_I0921" FT /note="HMMPfam hit to PF03477, ATP cone domain, score FT 5.4e-32" FT /inference="protein motif:HMMPfam:PF03477" FT CDS 1020632..1021753 FT /transl_table=11 FT /gene="ribD" FT /locus_tag="VSAL_I0922" FT /old_locus_tag="TVS0785" FT /product="pyrimidine deaminase/pyrimidine reductase FT (riboflavin biosynthesis protein RibD)" FT /EC_number="3.5.4.26" FT /db_xref="GOA:B6EI96" FT /db_xref="InterPro:IPR002125" FT /db_xref="InterPro:IPR002734" FT /db_xref="InterPro:IPR004794" FT /db_xref="InterPro:IPR011549" FT /db_xref="InterPro:IPR016192" FT /db_xref="InterPro:IPR016193" FT /db_xref="InterPro:IPR024072" FT /db_xref="UniProtKB/TrEMBL:B6EI96" FT /protein_id="CAQ78607.1" FT /translation="MKFTPQDHLMMQRAIQLAKRGIYTTAPNPNVGCVLVKNGLIVGEG FT AHLKAGEPHAEVHALRQASENAKGATAYVTLEPCSHYGRTPPCAEGLIKAGVVKVICAM FT VDPNPQVAGRGLAMLEAAGIETASGLLETESRALNPSFLTRMETGKPFVQLKMAASLDG FT KTALKNGVSQWITSKEARQDVQRYRAQAGVILSTAKTVIEDNASLNVRWSDLPNSIQES FT YLEAEVRQPLRVILDRQHQLTSELALFNTTGNVVTVSHQPSHPLSHPESHLYCDLDNNK FT QLVLSDVIQKIAQEHNVNHLWVEAGATLAASMICEGLVDELIIYLAPKLMGADGRSIVN FT LIGLEAMSEAINLDISDIRMVGKDIRITATIVR" FT misc_feature 1020641..1020943 FT /gene="ribD" FT /locus_tag="VSAL_I0922" FT /note="HMMPfam hit to PF00383, Cytidine and deoxycytidylate FT deaminas, score 1.6e-41" FT /inference="protein motif:HMMPfam:PF00383" FT misc_feature 1020791..1020907 FT /gene="ribD" FT /locus_tag="VSAL_I0922" FT /note="PS00903 Cytidine and deoxycytidylate deaminases FT zinc-binding region signature." FT /inference="protein motif:ProSite:PS00903" FT misc_feature 1021082..1021732 FT /gene="ribD" FT /locus_tag="VSAL_I0922" FT /note="HMMPfam hit to PF01872, RibD C-terminal domain,score FT 3.9e-53" FT /inference="protein motif:HMMPfam:PF01872" FT misc_feature 1021103..1021126 FT /gene="ribD" FT /locus_tag="VSAL_I0922" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1021757..1022413 FT /transl_table=11 FT /gene="ribC" FT /locus_tag="VSAL_I0923" FT /old_locus_tag="TVS0786" FT /product="riboflavin synthase alpha chain" FT /EC_number="2.5.1.9" FT /db_xref="GOA:B6EI97" FT /db_xref="InterPro:IPR001783" FT /db_xref="InterPro:IPR017938" FT /db_xref="InterPro:IPR023366" FT /db_xref="UniProtKB/TrEMBL:B6EI97" FT /protein_id="CAQ78608.1" FT /translation="MFTGIIESIGTLQAITPKGEDVSVTVNVGKLDMGDVKLGDSIATN FT GVCLTVVAMTKNSYTADLSLETLKRTGFVHYKAGDKVNLEKAMLPTTRFGGHIVSGHVD FT AVGEIIERHQTGRAVEFWIQLPQDLAKYVVEKGSITIDGISLTVNDLRKNAFKLTIVPH FT TASETTMDTFTVGKKVNLEVDLIARYLEKLVIGQKEEQPQSSVTMDLLAKSGFLN" FT misc_feature 1021763..1022017 FT /gene="ribC" FT /locus_tag="VSAL_I0923" FT /note="HMMPfam hit to PF00677, Lumazine binding FT domain,score 8.4e-34" FT /inference="protein motif:HMMPfam:PF00677" FT misc_feature 1021973..1022011 FT /gene="ribC" FT /locus_tag="VSAL_I0923" FT /note="PS00693 Riboflavin synthase alpha chain family FT signature." FT /inference="protein motif:ProSite:PS00693" FT misc_feature 1022054..1022308 FT /gene="ribC" FT /locus_tag="VSAL_I0923" FT /note="HMMPfam hit to PF00677, Lumazine binding FT domain,score 8.3e-40" FT /inference="protein motif:HMMPfam:PF00677" FT CDS 1022450..1023559 FT /transl_table=11 FT /gene="ribBA" FT /locus_tag="VSAL_I0924" FT /old_locus_tag="TVS0787" FT /product="3,4-dihydroxy-2-butanone 4-phosphate synthase FT (GTP cyclohydrolase II) (riboflavin biosynthesis protein FT RibBA)" FT /db_xref="GOA:B6EI98" FT /db_xref="InterPro:IPR000422" FT /db_xref="InterPro:IPR000926" FT /db_xref="InterPro:IPR016299" FT /db_xref="InterPro:IPR017945" FT /db_xref="UniProtKB/TrEMBL:B6EI98" FT /protein_id="CAQ78609.1" FT /translation="MAISSAKDIIEDIRLGKMVILMDDEDRENEGDLIIAAEKITPEAI FT NFMATHGRGLICLTMTKDRCEKLGLPPMVQDNNAQFTTNFTVSIEAAEGVTTGISAADR FT SRTVEAAVAKNAVAADLVQPGHIFPLAAQEGGVLTRAGHTEAGCDLARLAGFEPAGVIV FT EILNDDGSMARRPDLEIFAEKHDVKLGTIADLIEYRNNNETTIERVAECKLPTEFGDFD FT LVTYRDTIDNQLHYAMKKENTSGIAPLVRVHLQDTFTDILYSDRCAERSWTLPMAMQRI FT AAEGGVLIILGNEESTDSIVHKIKALERQDNGESPTMAKKQGTSRRVGVGSQILADMGI FT SDMRLLSSSSKRYHSLSGFGLNVVEYVSK" FT misc_feature 1022465..1023052 FT /gene="ribBA" FT /locus_tag="VSAL_I0924" FT /note="HMMPfam hit to PF00926, 3,4-dihydroxy-2-butanone FT 4-phosphate, score 1.5e-126" FT /inference="protein motif:HMMPfam:PF00926" FT misc_feature 1023065..1023556 FT /gene="ribBA" FT /locus_tag="VSAL_I0924" FT /note="HMMPfam hit to PF00925, GTP cyclohydrolase II,score FT 4.6e-11" FT /inference="protein motif:HMMPfam:PF00925" FT CDS 1023709..1024179 FT /transl_table=11 FT /gene="ribH" FT /locus_tag="VSAL_I0925" FT /old_locus_tag="TVS0788" FT /product="6,7-dimethyl-8-ribityllumazine synthase FT (riboflavin synthase beta chain)" FT /EC_number="2.5.1.9" FT /db_xref="GOA:B6EI99" FT /db_xref="InterPro:IPR002180" FT /db_xref="UniProtKB/Swiss-Prot:B6EI99" FT /protein_id="CAQ78610.1" FT /translation="MNVIEGGVAAPNAKIAIVISRFNSFINESLLSGAIDTLKRFGQVS FT EENITVVRCPGAVELPLVAQRVAKTAKYDAIVSLGSVIRGGTPHFEYVCSECNKGLAQV FT SLEYSIPVAFGVLTVDTIDQAIERAGTKAGNKGAEAALSALEMINVLSQIES" FT misc_feature 1023736..1024170 FT /gene="ribH" FT /locus_tag="VSAL_I0925" FT /note="HMMPfam hit to FT PF00885,6,7-dimethyl-8-ribityllumazine synthase, score FT 5.3e-88" FT /inference="protein motif:HMMPfam:PF00885" FT CDS 1024179..1024646 FT /transl_table=11 FT /gene="nusB" FT /locus_tag="VSAL_I0926" FT /old_locus_tag="TVS0789" FT /product="N utilization substance protein B (protein NusB)" FT /db_xref="GOA:B6EIA0" FT /db_xref="InterPro:IPR006027" FT /db_xref="InterPro:IPR011605" FT /db_xref="UniProtKB/Swiss-Prot:B6EIA0" FT /protein_id="CAQ78611.1" FT /translation="MGVSVKPAARRNARQFALQAIYSWQISKENVAAIEEQFLTADKYD FT EEEHHAKEPKLQAPETDVAYFRDLFSGVALNHIKLDGKMRPYLSRPLQDLDQMELALLR FT MSIYEMMNRDDVPYKVVINEAIELAKVFAAEDSHKFVNGVLDKAAPTLRKK" FT misc_feature 1024209..1024634 FT /gene="nusB" FT /locus_tag="VSAL_I0926" FT /note="HMMPfam hit to PF01029, NusB family, score 2e-40" FT /inference="protein motif:HMMPfam:PF01029" FT CDS 1024736..1025728 FT /transl_table=11 FT /gene="thiL" FT /locus_tag="VSAL_I0927" FT /old_locus_tag="TVS0790" FT /product="thiamine-monophosphate kinase" FT /EC_number="2.7.4.16" FT /db_xref="GOA:B6EIA1" FT /db_xref="InterPro:IPR000728" FT /db_xref="InterPro:IPR006283" FT /db_xref="InterPro:IPR010918" FT /db_xref="InterPro:IPR016188" FT /db_xref="UniProtKB/TrEMBL:B6EIA1" FT /protein_id="CAQ78612.1" FT /translation="MTSEFNLIERFFVEGNLSRKDVELGIGDDCALVSVPENHHVAITT FT DTLAAGTHFLLTADPVNVGYKALASNLSDLAAMGAKPTWVSLALTLPEPNEEWLKGFCE FT GFFCLAKLHNVQLIGGDTTKGPLSITITVQGIVPKGEAMTRKGALCGDDIYVTGTLGDS FT AAGLEVILEQTNDIELPLAKELEHRHYYSSPRIELAQEIRHLCHSALDISDGVISDLGH FT ILKQSNVNALLEVTLLPISNELKSYHHGDDEKCQKMALISGEEYELCFTAPRENREAIK FT KITTLLNQNVSIIGEITQGPFTNLQSGVQLVKEGKQLDWSLYGYDHFRS" FT misc_feature 1025186..1025659 FT /gene="thiL" FT /locus_tag="VSAL_I0927" FT /note="HMMPfam hit to PF02769, AIR synthase related FT protein, C-terminal dom, score 0.00078" FT /inference="protein motif:HMMPfam:PF02769" FT CDS 1025731..1026234 FT /transl_table=11 FT /gene="pgpA" FT /locus_tag="VSAL_I0928" FT /old_locus_tag="TVS0791" FT /product="phosphatidylglycerophosphatase A" FT /EC_number="3.1.3.27" FT /db_xref="GOA:B6EIA2" FT /db_xref="InterPro:IPR007686" FT /db_xref="UniProtKB/TrEMBL:B6EIA2" FT /protein_id="CAQ78613.1" FT /translation="MTNPLALISLKNPWHLLATGFGSGLAPIIPGTMGTLAAIPFYLLL FT AQLPFYLFVIAVIFSALIGIKICDITSSDMKVHDHGSIVWDEFVGLWITMSIVPYLNLS FT VTDWKWLLTGFILFRFFDMVKPWPIGWLDSKVHGGVGIMIDDIVAGFMALISLWLIGKY FT SGWL" FT misc_feature 1025767..1026216 FT /gene="pgpA" FT /locus_tag="VSAL_I0928" FT /note="HMMPfam hit to FT PF04608,Phosphatidylglycerophosphatase A, score 7.6e-82" FT /inference="protein motif:HMMPfam:PF04608" FT misc_feature order(1025800..1025868,1025881..1025949,1025977..1026045, FT 1026058..1026126,1026154..1026213) FT /gene="pgpA" FT /locus_tag="VSAL_I0928" FT CDS join(1026329..1026781,1026775..1027350) FT /pseudo FT /transl_table=11 FT /gene="luxP" FT /locus_tag="VSAL_I0929" FT /old_locus_tag="TVS0792" FT /product="autoinducer 2-binding periplasmic protein LuxP FT precursor (pseudogene)" FT /note="Similar to Vibrio harveyi Autoinducer 2-binding FT periplasmic protein LuxP precursor UniProt:P54300 (365 aa) FT fasta scores: E()=2e-68, 56.973% id in 337 aa. CDS contains FT a frameshift after codon 159. The CDS also seems to be FT truncated at the N-terminus. The sequence has been checked FT and is believed to be correct" FT /db_xref="PSEUDO:CAQ78614.1" FT /inference="similar to sequence:UniProt:P54300" FT CDS 1027355..1029592 FT /transl_table=11 FT /gene="luxQ" FT /locus_tag="VSAL_I0930" FT /old_locus_tag="TVS0794" FT /product="autoinducer 2 sensor kinase/phosphatase LuxQ" FT /EC_number="3.1.3.-" FT /note="The CDS appears to have a deletion of around 150 FT amino acid residues after codon 346 in comparison to the FT Vibrio cholerae orthologue" FT /db_xref="GOA:B6EIA4" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR015387" FT /db_xref="UniProtKB/TrEMBL:B6EIA4" FT /protein_id="CAQ78615.1" FT /translation="MNDKRKVLKKASLADLIFRAIFIIFSILTVGITIHTYQLSVNTIN FT EEVKRNLEQTSALLENYFNHRLAILQIRQDTDAGSLGLTDHYGNGRILNLEQYFSDIEA FT KEPSNSPDFRFLEANNHVFWSDDNHLFLGMNSENLKYIIDKNIYINTWYYLTVTTDEKI FT THLLIRRTPVVSSFTGEVRSYLYNAAILNNNISFVHSLKRVSRSQEIFIVNNKKLISST FT IKKSTPRYAEVEKCIGNGVDTFSGKILNYTPLKIKSLNGSLSIVSLKNKENVTLLEQRF FT IYSVVLSFFVLIAIAVLVRGLFEHRILLALNALLSYAKSVSKKNGNKHYLGSGILEFDQ FT IGAKLEGIFIELIEAKEESHKAQAAAEKLTLVKSDFLARMSHEIRTPLNGILGISGLLK FT QAQLPLEQKKQIQIIHQGGEHLLAVLNDILDFSQIEQDKLNINFEEFVLDDVLDTINAI FT YTPLCMEKNITFNLNNNIDNNVILYTDKVRLTQILFNLLSNGVKFTEIGQVTLSLNLES FT KNGQIFLCFDVEDTGVGIDIENQASVFDPFIQVESTGTRKFGGSGLGLAIVKQLLHLLN FT GSITVVSSPGLGTSFTIRLPVEVIEYKKELPLAASSHNEYLLPTNLKVLLVEDNKSNAY FT IAKAYCQKYSLDVTWVTSAAEGIQMIKEHSFDLVLMDNQMPEMSGIEATRYIRKILNLS FT LPIYAYTADVLEDATNEFLSAGADYIITKPIKEKSILDALVFYKAELKRKN" FT misc_feature order(1027397..1027465,1028195..1028263) FT /gene="luxQ" FT /locus_tag="VSAL_I0930" FT misc_feature 1028468..1028665 FT /gene="luxQ" FT /locus_tag="VSAL_I0930" FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain, score 2.5e-21" FT /inference="protein motif:HMMPfam:PF00512" FT misc_feature 1028804..1029148 FT /gene="luxQ" FT /locus_tag="VSAL_I0930" FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HS, score 1e-37" FT /inference="protein motif:HMMPfam:PF02518" FT misc_feature 1029218..1029559 FT /gene="luxQ" FT /locus_tag="VSAL_I0930" FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 2.1e-29" FT /inference="protein motif:HMMPfam:PF00072" FT CDS complement(1029589..1029864) FT /transl_table=11 FT /locus_tag="VSAL_I0931" FT /old_locus_tag="TVS0795" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EIA5" FT /protein_id="CAQ78616.1" FT /translation="MKSDVDKMLNKHQDLTHSTDMKVTSHTQREVGDWVLHTVMIENCN FT TPFKFKRSQAYKSLKGANVNMTYYPSTESLAGFELEIMKVVRIKRS" FT CDS 1029953..1030303 FT /transl_table=11 FT /locus_tag="VSAL_I0932" FT /old_locus_tag="TVS0796" FT /product="antibiotic biosynthesis monooxygenase" FT /db_xref="GOA:B6EIA6" FT /db_xref="InterPro:IPR007138" FT /db_xref="InterPro:IPR011008" FT /db_xref="UniProtKB/TrEMBL:B6EIA6" FT /protein_id="CAQ78617.1" FT /translation="MSKKVYCIAQFLPKEGKLNELFRVLQALEPNTMREDGCQQYTVTR FT QLQSPFAEGESYPIAFNEIWANNDVFEAHCQREEIKQFFEQQCIAEDGLVDKWNVCIYS FT DEPNDFDAPKLN" FT misc_feature 1029989..1030198 FT /locus_tag="VSAL_I0932" FT /note="HMMPfam hit to PF03992, Antibiotic biosynthesis FT monooxygenase, score 0.0021" FT /inference="protein motif:HMMPfam:PF03992" FT CDS complement(1030373..1032256) FT /transl_table=11 FT /gene="dxs" FT /locus_tag="VSAL_I0933" FT /old_locus_tag="TVS0797" FT /product="1-deoxy-D-xylulose-5-phosphate synthase FT (1-deoxyxylulose 5-phosphate synthase)" FT /EC_number="2.2.1.7" FT /db_xref="GOA:B6EIA7" FT /db_xref="InterPro:IPR005474" FT /db_xref="InterPro:IPR005475" FT /db_xref="InterPro:IPR005476" FT /db_xref="InterPro:IPR005477" FT /db_xref="InterPro:IPR009014" FT /db_xref="InterPro:IPR011766" FT /db_xref="InterPro:IPR015941" FT /db_xref="InterPro:IPR020826" FT /db_xref="UniProtKB/Swiss-Prot:B6EIA7" FT /protein_id="CAQ78618.1" FT /translation="MSLDISKYPILALANTPDELRSLPKESLPALCDELRAYLLKSVSK FT SSGHLASGLGVVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRREKLSTIRQKDGL FT HPFPWRDESEYDVLSVGHSSTSISAALGLAICAEKEQANRKVISVIGDGAITAGMAFEA FT LNHAGDIHPDMLVVLNDNEMSISENVGALNNQLARVLSGSLYTSIREGGKKVLSGTPTI FT KELLKRTEEHIKGMVIPGTMFEELGFNYIGPVDGHDVNELVRTLKNMRNLKGPQFLHIM FT TKKGKGYEPAEKDPISYHGVPKFDPSNHSLPKSSGGKPTFSNIFGDFLCDMAKDDDKLM FT AITPAMREGSGMVRFSKEFPGQYFDTAIAEQHAVTLASGMAIAGYNPIVAIYSTFLQRG FT YDQLIHDVAIMNLPVMFAIDRAGLVGADGQTHQGAFDISFMRCIPNMVIMTPSDENECR FT QMLYTGHKHTGPSAVRYPRGSATGIEVNKEMQALEIGKGRLIRETKITEKGERVAILNF FT GTFLSNSVEAAEKLDATVADMRFAKPLDETLLCELVTSHDVLVTIEENAISGGAGSGVI FT EFLMKNRLIKPVLQLGLPDQFIAQGTQEEMHAELMLDATGIEKQIRDYLDL" FT misc_feature complement(1030406..1030774) FT /gene="dxs" FT /locus_tag="VSAL_I0933" FT /note="HMMPfam hit to PF02780, Transketolase, C-terminal FT domain, score 3.8e-30" FT /inference="protein motif:HMMPfam:PF02780" FT misc_feature complement(1030811..1031302) FT /gene="dxs" FT /locus_tag="VSAL_I0933" FT /note="HMMPfam hit to PF02779, Transketolase, pyridine FT binding domai, score 4.6e-55" FT /inference="protein motif:HMMPfam:PF02779" FT misc_feature complement(1030934..1030984) FT /gene="dxs" FT /locus_tag="VSAL_I0933" FT /note="PS00802 Transketolase signature 2." FT /inference="protein motif:ProSite:PS00802" FT misc_feature complement(1032092..1032151) FT /gene="dxs" FT /locus_tag="VSAL_I0933" FT /note="PS00801 Transketolase signature 1." FT /inference="protein motif:ProSite:PS00801" FT CDS complement(1032279..1033175) FT /transl_table=11 FT /gene="ispA" FT /locus_tag="VSAL_I0934" FT /old_locus_tag="TVS0798" FT /product="geranyltranstransferase" FT /EC_number="2.5.1.10" FT /db_xref="GOA:B6EIA8" FT /db_xref="InterPro:IPR000092" FT /db_xref="InterPro:IPR008949" FT /db_xref="InterPro:IPR017446" FT /db_xref="UniProtKB/TrEMBL:B6EIA8" FT /protein_id="CAQ78619.1" FT /translation="MTDSLKQQLPIFQQRNIEHLNQWFEKIEIQQQPLTDAMKYALLLG FT GKRARPYLVYITANMLGIDSEHADAPAAAVECIHSYSLIHDDLPAMDNDDLRRGHATCH FT IKFDEATAILAGDALQTLAFEILANGTLAEEAESSRIDMIRVLSKASGASGMCMGQSLD FT LQAEGKQVDLLSLEQIHANKTGALMKSAIQLGALCAGEKGKQILPQLEKYADAIGLAFQ FT VQDDILDITSDTETLGKPQGSDIALEKSTYPALLGLDGAKLKAEQLYQTAITALDDIPY FT NTDAMQAFAQYVIERKN" FT misc_feature complement(1032294..1033076) FT /gene="ispA" FT /locus_tag="VSAL_I0934" FT /note="HMMPfam hit to PF00348, Polyprenyl synthetase,score FT 1.3e-98" FT /inference="protein motif:HMMPfam:PF00348" FT misc_feature complement(1032489..1032527) FT /gene="ispA" FT /locus_tag="VSAL_I0934" FT /note="PS00444 Polyprenyl synthetases signature 2." FT /inference="protein motif:ProSite:PS00444" FT misc_feature complement(1032879..1032929) FT /gene="ispA" FT /locus_tag="VSAL_I0934" FT /note="PS00723 Polyprenyl synthetases signature 1." FT /inference="protein motif:ProSite:PS00723" FT CDS complement(1033168..1033410) FT /transl_table=11 FT /gene="xseB" FT /locus_tag="VSAL_I0935" FT /old_locus_tag="TVS0799" FT /product="exodeoxyribonuclease VII small subunit" FT /EC_number="3.1.11.6" FT /db_xref="GOA:B6EIA9" FT /db_xref="InterPro:IPR003761" FT /db_xref="UniProtKB/Swiss-Prot:B6EIA9" FT /protein_id="CAQ78620.1" FT /translation="MAVKKPENLTFEAAIEELDSVVNQLESGDLPLEDALKKFERGISL FT ARAGQEKLTQAEQRVDILLQADDNAELTPFDANDD" FT misc_feature complement(1033195..1033386) FT /gene="xseB" FT /locus_tag="VSAL_I0935" FT /note="HMMPfam hit to PF02609, Exonuclease VII small FT subunit, score 2.5e-27" FT /inference="protein motif:HMMPfam:PF02609" FT CDS 1033690..1034454 FT /transl_table=11 FT /gene="motA" FT /locus_tag="VSAL_I0936" FT /old_locus_tag="TVS0800" FT /product="sodium-driven polar flagellar protein MotA" FT /db_xref="GOA:B6EIB0" FT /db_xref="InterPro:IPR000540" FT /db_xref="InterPro:IPR002898" FT /db_xref="UniProtKB/TrEMBL:B6EIB0" FT /protein_id="CAQ78621.1" FT /translation="MDLATLIGLVGSFAFIIMAMVLAGGLAIFMDVTSVLIVFGGSIFV FT VLMKFTVGQFFGAGKIAAKAFIFKTDEPVDLIVTIVEMADAARKGGFLALEEKEISNSF FT MQKGIDLLVDGHDAEVVKATLQKDIALTNERHEKGIGVFTAFGDVAPAMGMIGTLIGLV FT GMLSNMDDPKSIGPAMAVALLTTLYGSVISNMIAFPIAHKLELRKEQEKLNRRLILDGI FT LAIQDGQNPRVIDSYLRNYLNEKKRVVDTGEE" FT sig_peptide 1033690..1033758 FT /gene="motA" FT /locus_tag="VSAL_I0936" FT misc_feature order(1033696..1033764,1033792..1033860,1034104..1034172, FT 1034215..1034283) FT /gene="motA" FT /locus_tag="VSAL_I0936" FT misc_feature 1033948..1034349 FT /gene="motA" FT /locus_tag="VSAL_I0936" FT /note="HMMPfam hit to PF01618, MotA/TolQ/ExbB proton FT channel family, score 5.5e-07" FT /inference="protein motif:HMMPfam:PF01618" FT misc_feature 1034233..1034286 FT /gene="motA" FT /locus_tag="VSAL_I0936" FT /note="PS01307 Flagellar motor protein motA family FT signature." FT /inference="protein motif:ProSite:PS01307" FT CDS 1034469..1035398 FT /transl_table=11 FT /gene="motB" FT /locus_tag="VSAL_I0937" FT /old_locus_tag="TVS0801" FT /product="sodium-driven polar flagellar protein MotB" FT /db_xref="GOA:B6EIB1" FT /db_xref="InterPro:IPR006665" FT /db_xref="UniProtKB/TrEMBL:B6EIB1" FT /protein_id="CAQ78622.1" FT /translation="MEDEDKCKCPPGSPIWMAIFADLATLLMCFFVLLLSFSEMDVLKF FT KQIAGSMKFAFGVQNVLEVKDIPKGTSVIAQEFRPGRPEPTPIEVIMQQTIDIPQKTLD FT FHDGESDRAGGSKREAGNLTGGESSSTSTQTNAQSDAESQSQNQSQQELEETIKKALER FT EIAEGAVEVENLGQQLVIRIREKGAFPAGSAFLQPKFRPLIRQIGELVKDVPGIIRVSG FT HTDNQPLESELYRSNWDLSAQRAVSVGHEMLRVKGFNSDRLRVRGMASTEPLGPNKTAA FT QRARNRRVEISIMQGKPYESDEVPVAKN" FT misc_feature 1034508..1034576 FT /gene="motB" FT /locus_tag="VSAL_I0937" FT misc_feature 1035030..1035329 FT /gene="motB" FT /locus_tag="VSAL_I0937" FT /note="HMMPfam hit to PF00691, OmpA family, score 1.2e-25" FT /inference="protein motif:HMMPfam:PF00691" FT CDS 1035565..1037013 FT /transl_table=11 FT /gene="thiI" FT /locus_tag="VSAL_I0938" FT /old_locus_tag="TVS0802" FT /product="thiamine biosynthesis protein ThiI" FT /db_xref="GOA:B6EIB2" FT /db_xref="InterPro:IPR001763" FT /db_xref="InterPro:IPR003720" FT /db_xref="InterPro:IPR004114" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR020536" FT /db_xref="UniProtKB/Swiss-Prot:B6EIB2" FT /protein_id="CAQ78623.1" FT /translation="MKFIVKPHPEVFVKSDSVRKRFIRILETNLRSIIQRDTKGVEVIN FT RRDYIEVSGLDGTYRNQVLTAVTHTPGIHHTLEVKQTAFADMHDIYEQCLEMNREIIEG FT KTFCVRVKRRGTHPFTSIELERYVGGGLNQAVESAKVKLKNPDVTVKFEVENEKLNLVI FT ARHKGLGGFPLGTQEDVLSLISGGFDSGVSSYLHIKRGSKVHYMFFNLGGPAHEIGVKQ FT VSHFLWKKYGSSAKVKFIAVDFEPVVAEILEKVDDGQMGVILKRMFMRAGGMVAEKLGI FT QGMVTGEALGQVSSQTLTNLRHIDNVTDTLILRPLINWDKEDIINVARDIGTEDFAKTM FT PEYCGVISKKPTIKAEKLKLEKEEAKFDFSILDQVIYDARVMDIRAIEKESQEQAPEVE FT MVSELGSDVVVLDIRSAEEEDESPLIIEGVEVKHLPFFRIATQFGDLDQSKEYLLYCDH FT GVMSRLQALLLIENGYKNVKVYRP" FT misc_feature 1035787..1036059 FT /gene="thiI" FT /locus_tag="VSAL_I0938" FT /note="HMMPfam hit to PF02926, THUMP domain, score 5.5e-24" FT /inference="protein motif:HMMPfam:PF02926" FT misc_feature 1036087..1036671 FT /gene="thiI" FT /locus_tag="VSAL_I0938" FT /note="HMMPfam hit to PF02568, Thiamine biosynthesis FT protein (ThiI), score 1.1e-86" FT /inference="protein motif:HMMPfam:PF02568" FT misc_feature 1036099..1036560 FT /gene="thiI" FT /locus_tag="VSAL_I0938" FT /note="HMMPfam hit to PF06508, ExsB, score 0.0021" FT /inference="protein motif:HMMPfam:PF06508" FT CDS complement(1037075..1037992) FT /transl_table=11 FT /locus_tag="VSAL_I0939" FT /old_locus_tag="TVS0803" FT /product="transcriptional regulator, LysR family" FT /db_xref="GOA:B6EIB3" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EIB3" FT /protein_id="CAQ78624.1" FT /translation="MDINKLITLLPDMAAFVTVVDSGSFSKAAIILDMTPSGVSRQVSR FT LEKALQVKLLERTTRKQILTVAGQDTYNYCKNIVDNAQEVVNVSDSNNNKIEGELRIAT FT PKAFGNKVLQPLLRIFVHHYPHITLKIKVTDQPCDPIHDNLDLIFKLTNSPQENLVAKK FT LGDVDLILCASPEYLKQKGIPNHPMELSAYDCLYLGETQHDNQWLFEKGNECLTMTVNG FT RFIVNHTEMRLDAVKHHLGIGVFPDFVVREDLTHGKLIEVMPDWTLQGNYTGEIIMQFL FT RSNHMPNRLRVFIDFMVQQFKTQT" FT misc_feature complement(1037087..1037716) FT /locus_tag="VSAL_I0939" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 5.5e-36" FT /inference="protein motif:HMMPfam:PF03466" FT misc_feature complement(1037786..1037965) FT /locus_tag="VSAL_I0939" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 1e-16" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature complement(1037831..1037923) FT /locus_tag="VSAL_I0939" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature complement(1037861..1037926) FT /locus_tag="VSAL_I0939" FT /note="Predicted helix-turn-helix motif with score FT 1593.000, SD 4.61 at aa 23-44, sequence FT GSFSKAAIILDMTPSGVSRQVS" FT CDS 1038067..1039011 FT /transl_table=11 FT /locus_tag="VSAL_I0940" FT /old_locus_tag="TVS0804" FT /product="integral membrane protein" FT /db_xref="GOA:B6EIB4" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:B6EIB4" FT /protein_id="CAQ78625.1" FT /translation="MSYVISQRKKRIAMESCVTREQQGSLNQYIPPLMLLLVAIFWGTS FT YGIAKEALLFTGVLVFLMIRFVMTTLILLPIVIYRKNIAHWKSVIPTGFILFLIFICET FT YGIKNTTASNAAFLISLFVVFTPFVEWLINKNRPTNKLFFLSIMSVIGVFLLTNANVHQ FT ININIGDVLMLMAAVLRGFMVVLTKKVMVDKEVDPIMVTSVQSSVVSILSIILLLSIHG FT TEFIDTIPMEFSFWLLALYLVLFCTVFAFYAQNYSVKRMSPIRVSILMGSEPIFGALFA FT FLWLSESFTVIQIMGASLIFIVTFIVTRKETVS" FT misc_feature order(1038136..1038204,1038232..1038300,1038319..1038387, FT 1038397..1038465,1038490..1038543,1038556..1038624, FT 1038661..1038729,1038757..1038825,1038862..1038921, FT 1038931..1038990) FT /locus_tag="VSAL_I0940" FT misc_feature 1038184..1038540 FT /locus_tag="VSAL_I0940" FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 2.8e-17" FT /inference="protein motif:HMMPfam:PF00892" FT misc_feature 1038571..1038993 FT /locus_tag="VSAL_I0940" FT /note="HMMPfam hit to PF03151, Triose-phosphate Transporter FT family, score 0.0036" FT /inference="protein motif:HMMPfam:PF03151" FT misc_feature 1038598..1038993 FT /locus_tag="VSAL_I0940" FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 1e-20" FT /inference="protein motif:HMMPfam:PF00892" FT CDS complement(1039081..1039671) FT /transl_table=11 FT /gene="thiJ" FT /locus_tag="VSAL_I0941" FT /old_locus_tag="TVS0805" FT /product="protein ThiJ" FT /db_xref="InterPro:IPR002818" FT /db_xref="InterPro:IPR006287" FT /db_xref="UniProtKB/TrEMBL:B6EIB5" FT /protein_id="CAQ78626.1" FT /translation="MTTNILVCLAPGTEELEAITVIDILERAKFKVTIASTAFDGSLTM FT KAAQRVTLTADVKLVDVADEEFDCIVLPGGLKGSENFRDSTLLIELLKQQKDDGKWVAA FT ICAAPAIVLQHHNIYPAALMTCYPALMHHIPEQNRRVKRVFTDVLNNLITSQGPGSALE FT FAMEIVTQFGGKELTAQLATDLVTLPTLNYHQA" FT misc_feature complement(1039153..1039581) FT /gene="thiJ" FT /locus_tag="VSAL_I0941" FT /note="HMMPfam hit to PF01965, DJ-1/PfpI family, score FT 1.5e-31" FT /inference="protein motif:HMMPfam:PF01965" FT CDS complement(1039668..1040567) FT /transl_table=11 FT /gene="panE" FT /locus_tag="VSAL_I0942" FT /old_locus_tag="TVS0806" FT /product="2-dehydropantoate 2-reductase" FT /EC_number="1.1.1.169" FT /db_xref="GOA:B6EIB6" FT /db_xref="InterPro:IPR003710" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR013332" FT /db_xref="InterPro:IPR013752" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EIB6" FT /protein_id="CAQ78627.1" FT /translation="MSVNITILGPGAVGSLWACYFQKAGHNVSLWTRNTVPSDISLSLS FT AQENSSHQFSCDNPESLPHCDLLFITVKAWQVNLALLPLLPLLSKETILLFMHNGMGAI FT DTMENELTHHPILQATTTHAALKHNKNHVEHTGVGATVIGPFNSLGKQCLFMKEVLDHS FT LTNVEWNDSIQPALWKKLAINCAINPLTAIHQCKNGDLLHPKLHSDVLTICNEVYLVLE FT KNHSDWSLKELITTVNQVITATSVNYSSMNRDCFYQRKSEIDFITGYLLQQAKKHRISI FT PTNQALYNKIKQLEEYLL" FT misc_feature complement(1039683..1040054) FT /gene="panE" FT /locus_tag="VSAL_I0942" FT /note="HMMPfam hit to PF08546, Ketopantoate reductase FT PanE/ApbA C ter, score 1.5e-46" FT /inference="protein motif:HMMPfam:PF08546" FT misc_feature complement(1040124..1040555) FT /gene="panE" FT /locus_tag="VSAL_I0942" FT /note="HMMPfam hit to PF02558, Ketopantoate reductase FT PanE/ApbA, score 2.1e-41" FT /inference="protein motif:HMMPfam:PF02558" FT misc_feature complement(1040166..1040561) FT /gene="panE" FT /locus_tag="VSAL_I0942" FT /note="HMMPfam hit to PF01210, NAD-dependent FT glycerol-3-phosphate deh, score 0.00066" FT /inference="protein motif:HMMPfam:PF01210" FT CDS complement(join(1040669..1041394,1041398..1041505)) FT /pseudo FT /transl_table=11 FT /gene="ompK" FT /locus_tag="VSAL_I0943" FT /old_locus_tag="TVS0807" FT /product="outer membrane protein OmpK (pseudogene)" FT /note="Similar to Vibrio alginolyticus Outer membrane FT protein OmpK UniProt:Q4PNS4 (281 aa) fasta scores: FT E()=8.6e-71, 72.245% id in 245 aa. CDS contains a nonsense FT mutation (CAG to TAG) after codon 36. The sequence has been FT checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ78628.1" FT /inference="similar to sequence:UniProt:Q4PNS4" FT misc_feature complement(1040918..1041337) FT /gene="ompK" FT /locus_tag="VSAL_I0943" FT /note="HMMPfam hit to PF03502, Nucleoside-specific FT channel-forming prote, score 2.1e-67" FT /inference="protein motif:HMMPfam:PF03502" FT CDS complement(1041789..1043132) FT /transl_table=11 FT /locus_tag="VSAL_I0944" FT /old_locus_tag="TVS0809" FT /product="MSF transporter" FT /db_xref="GOA:B6EIB8" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:B6EIB8" FT /protein_id="CAQ78629.1" FT /translation="MSHSMQWKTAIKSYMDKRLLWVFMLGCSSGFPWVLIGSNMSGWLQ FT DAGLTRAAIGYFGSVFAVYAINFMWAPLVDRVKLPFLSKKLGQRKSWIFLCQGIVLVST FT FQIAGLNPTDNLVLISMFALVISIASSTQDIAIDAFRIDTFPKSESTKMPQASAMAVIG FT WWTGYSLPGYFAFVNADTIGWNNVYYGMTAIVALLMVFTLLVGEPKTKRDELQHEAEER FT YNKVIGSKTATWFSVTIIEPFYDFFKRNGVKTACTLLLFVFLFKIGEAFLGRMSITFYK FT EIGFSNEQIGYYSKLIGWGATIFFTLLGSLINVRFGVIKGLMIGGVAMAASNLMFALIA FT NVGPNEHLFLATIIVDNFTTAFSTVAFVSFLTILTGEAFSATQYALLASLGNLGRTTLA FT SFSGELADYLNSWPLFFILTAVMVIPSLIMLLMLKDHFKALLDKSQGS" FT misc_feature complement(order(1041834..1041902,1042020..1042088, FT 1042116..1042184,1042197..1042265,1042293..1042361, FT 1042515..1042574,1042602..1042661,1042722..1042790, FT 1042803..1042862,1042911..1042979,1043022..1043075)) FT /locus_tag="VSAL_I0944" FT misc_feature complement(1041912..1043069) FT /locus_tag="VSAL_I0944" FT /note="HMMPfam hit to PF07690, Major Facilitator FT Superfamily, score 1e-17" FT /inference="protein motif:HMMPfam:PF07690" FT CDS complement(1043240..1043797) FT /transl_table=11 FT /gene="rotA" FT /locus_tag="VSAL_I0945" FT /old_locus_tag="TVS0810" FT /product="peptidyl-prolyl cis-trans isomerase precursor" FT /EC_number="5.2.1.8" FT /db_xref="GOA:B6EIB9" FT /db_xref="InterPro:IPR002130" FT /db_xref="InterPro:IPR020892" FT /db_xref="UniProtKB/TrEMBL:B6EIB9" FT /protein_id="CAQ78630.1" FT /translation="MKLTSKVALLIAALGFNQSALAESVKFDTTLGSFTIELNAEKAPI FT SVANFIRYVEDGSYVGTQFHRVIPGFMAQGGGFDKDMLKKSNYGPIKNEGYNGLGNDTA FT TVAMARTNNPDSATRQFYINLNDNDFLNANQRPPGYAVFGKVTQGFDIIQKMASKPTKA FT LANGMRDIPVEPIIITKATLIK" FT misc_feature complement(1043246..1043728) FT /gene="rotA" FT /locus_tag="VSAL_I0945" FT /note="HMMPfam hit to PF00160, Cyclophilin type FT peptidyl-prolyl cis-tr, score 1.6e-37" FT /inference="protein motif:HMMPfam:PF00160" FT misc_feature complement(1043570..1043623) FT /gene="rotA" FT /locus_tag="VSAL_I0945" FT /note="PS00170 Cyclophilin-type peptidyl-prolyl cis-trans FT isomerase signature." FT /inference="protein motif:ProSite:PS00170" FT sig_peptide complement(1043732..1043797) FT /gene="rotA" FT /locus_tag="VSAL_I0945" FT CDS complement(1043800..1044369) FT /transl_table=11 FT /locus_tag="VSAL_I0946" FT /old_locus_tag="TVS0811" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR005619" FT /db_xref="UniProtKB/TrEMBL:B6EIC0" FT /protein_id="CAQ78631.1" FT /translation="MKKAIIALSALFLAACSAPSDPQLDIRPVASSSAHQIVDGTTLTL FT DSSDLRTAQYVAVIDNGRQNVQPIHAKQNLRVTLEDALSTQLKAQGFVITVDSDNTLRL FT DIIEALVSVQHSLMSNDMKTEVKLQITAETPQGKFVKTYTGVSEKTGAMSADNEAIEGV FT LNDLINAVLDKIAVDEELQTYIKGNF" FT misc_feature complement(1043806..1044369) FT /locus_tag="VSAL_I0946" FT /note="HMMPfam hit to PF03923, Uncharacterized lipoprotein, FT score 4.4e-54" FT /inference="protein motif:HMMPfam:PF03923" FT sig_peptide complement(1044310..1044369) FT /locus_tag="VSAL_I0946" FT misc_feature complement(1044322..1044354) FT /locus_tag="VSAL_I0946" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1044383..1045531) FT /transl_table=11 FT /locus_tag="VSAL_I0947" FT /old_locus_tag="TVS0812" FT /product="putative methyltransferase" FT /EC_number="2.1.1.52" FT /note="Weakly similar to Escherichia coli.; rsmC; Ribosomal FT RNA small subunit methyltransferase C (P39406); length=342; FT id 28.620%; ungapped id 30.249%; E()=4.9e-13; 297 aa FT overlap; query 125-418; subject 57-340" FT /db_xref="GOA:B6EIC1" FT /db_xref="InterPro:IPR007848" FT /db_xref="InterPro:IPR017237" FT /db_xref="UniProtKB/Swiss-Prot:B6EIC1" FT /protein_id="CAQ78632.1" FT /translation="MKTELCLFDRTLNLQRYPKRAQELLQAWDAGDEFIIKHVEEELNL FT EDNKNILILNDNFGALSCWFSEKHNVTMMTDSFVSQRGTLKNLQRNQCNRVQLISSTEE FT MPEGFDLVIMQIPKNNRMLAWQLQQLRQSMTAECPIIAVNKAKEIHSSTLEVFEDYLGE FT TKTSLAWKKHRLVFSNANATNPLTIAEAVCWSVDNEDIDLLNYPNVYSGERLDQGARFM FT LEHIPVDAELRHIIDLGCGNGVLSVKAAQLNPEARITCIDESFMAVESARRNLEVNLGK FT ERQFQFIANNCLDGFKKHSSYLVLCNPPFHQGQAVTDHIAWQMFCDAKHILCKEGKLLV FT IGNRHLDYDDKLCRLFGEENVTTIASNSKFVILEAVKAEKSK" FT misc_feature complement(1044410..1044934) FT /locus_tag="VSAL_I0947" FT /note="HMMPfam hit to PF05175, Methyltransferase small FT domain, score 1.5e-65" FT /inference="protein motif:HMMPfam:PF05175" FT misc_feature complement(1044602..1044622) FT /locus_tag="VSAL_I0947" FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT CDS 1045625..1045939 FT /transl_table=11 FT /gene="bolA" FT /locus_tag="VSAL_I0948" FT /old_locus_tag="TVS0813" FT /product="BolA protein" FT /db_xref="InterPro:IPR002634" FT /db_xref="UniProtKB/TrEMBL:B6EIC2" FT /protein_id="CAQ78633.1" FT /translation="MIQQQIEQKLHSELSSSYLKVLNESYMHNVPEGSESHFKVIVVSD FT QFNDKRLLARHRMINAILADELANHIHALAIHTYTESEWQALDSELVPSSPNCMGGSKS FT " FT misc_feature 1045649..1045876 FT /gene="bolA" FT /locus_tag="VSAL_I0948" FT /note="HMMPfam hit to PF01722, BolA-like protein, score FT 1.3e-39" FT /inference="protein motif:HMMPfam:PF01722" FT CDS 1046336..1047676 FT /transl_table=11 FT /gene="nqrA" FT /locus_tag="VSAL_I0949" FT /old_locus_tag="TVS0814" FT /product="Na(+)-translocating NADH-ubiquinone reductase FT subunit A" FT /EC_number="1.6.5.3" FT /db_xref="GOA:B6EIC3" FT /db_xref="InterPro:IPR008703" FT /db_xref="InterPro:IPR022615" FT /db_xref="UniProtKB/Swiss-Prot:B6EIC3" FT /protein_id="CAQ78634.1" FT /translation="MITIKKGLDLPIAGVPTQVINDGNSITKVALLGEEYVGMRPTMHA FT RVEDVVKKGQILFADKKNPGVIFTSPVSGKVVEINRGAKRVLQSVVIAVEGEEQVTFNS FT YAANQLASLDRDAIKQQLIDSGAWTALRTRPFSKVPAIDSETKAIFVTAMDTNPLAADA FT EVIINQQEDAFVAGLDLLSVLTGEKVYVCKKGGSLPRSSQGNVEEHVFDGPHPAGLAGT FT HMHYLYPVDLNNVAWSIGYQDVIAFGQLFLTGEIYSDRIVSLAGPAVNNPRLVRTITGA FT SLLELTDSEVMPGEVRIISGSVLNGTQASGPHAYLGPYHQQVCVLREGREKEFLGWAVP FT GKNKFSVTRSFLSHVFSGQLFNMTTTTNGSDRAMVPIGSYERVMPLDMEPTMLLRDLCA FT GDVDSAARLGALELDEDDLGLCTYVCPGKYEYGPMLREILDTIEKEG" FT misc_feature 1046336..1047673 FT /gene="nqrA" FT /locus_tag="VSAL_I0949" FT /note="HMMPfam hit to PF05896, Na(+)-translocating FT NADH-quinone reductase s, score 3.8e-284" FT /inference="protein motif:HMMPfam:PF05896" FT CDS 1047680..1048924 FT /transl_table=11 FT /gene="nqrB" FT /locus_tag="VSAL_I0950" FT /old_locus_tag="TVS0815" FT /product="Na(+)-translocating NADH-quinone reductase FT subunit B" FT /EC_number="1.6.5.3" FT /db_xref="GOA:B6EIC4" FT /db_xref="InterPro:IPR004338" FT /db_xref="InterPro:IPR010966" FT /db_xref="UniProtKB/TrEMBL:B6EIC4" FT /protein_id="CAQ78635.1" FT /translation="MSLLKIIEKIEPHFEPGGKYEKWFALYEAAATLFYTPGLVTKGGS FT HVRDSVDLKRIMIMVWFAVFPATFWGMYNSGHQAIVALEHMYSGAELAAVVSGDWHYWF FT TEMLGGTISADAGWGSSMLLGATYFLPIYAVVFIVGGFWEVLFCMVRKHEVNEGFFVTS FT ILFALIVPPTLPLWQAALGITFGVVVAKEIFGGTGRNFLNPALAGRAFLFFAYPAQISG FT DTVWTAADGFSGATALSQWAQGGQGGLVNTVTGNTISWMDAFIGNIPGSIGEVSTLALI FT LGGLMIVYMRIASWRIIAGVMIGMVAVSTLFNLIGSDTNAMFSMPWHWHLVLGGFAFGM FT IFMATDPVSASFTSKGKWWYGILIGGMAVMIRVVNPAYPEGMMLAILFANLFAPLFDNL FT VVEGNVKRRLKRYGK" FT misc_feature 1047791..1048903 FT /gene="nqrB" FT /locus_tag="VSAL_I0950" FT /note="HMMPfam hit to PF03116, NQR2, RnfD, RnfE FT family,score 4.9e-216" FT /inference="protein motif:HMMPfam:PF03116" FT misc_feature order(1047851..1047919,1048052..1048120,1048154..1048222, FT 1048466..1048534,1048553..1048621,1048664..1048732, FT 1048751..1048804,1048814..1048882) FT /gene="nqrB" FT /locus_tag="VSAL_I0950" FT CDS 1048914..1049684 FT /transl_table=11 FT /gene="nqrC" FT /locus_tag="VSAL_I0951" FT /old_locus_tag="TVS0816" FT /product="Na+-translocating NADH-quinone reductase subunit FT C" FT /db_xref="GOA:B6EIC5" FT /db_xref="InterPro:IPR007329" FT /db_xref="InterPro:IPR010204" FT /db_xref="UniProtKB/TrEMBL:B6EIC5" FT /protein_id="CAQ78636.1" FT /translation="MASNNDSIKKTLLVVVGLSLVCSLVVSMAASLLKDKQQYNAVLDK FT QKNIVAVASLNDKGTDIPAIYQEYIEPRLVDFSTGEFVEGNAASFNQRASAKDSATSIK FT LTPEQDKAKIIRRSNIGLVYLVKEDNELTRIILPIHGSGLWSMMYAFLAIETDGNTIAG FT ITYYDQAETPGLGGEVENPQWRAQFIGKKLFNADGTLAIKVVKGGAPADSVSGVDGLSG FT ATLTSNGVQHTFDFWLGDMGFGPFLAKVKAGDLN" FT sig_peptide 1048914..1049000 FT /gene="nqrC" FT /locus_tag="VSAL_I0951" FT misc_feature 1048947..1049012 FT /gene="nqrC" FT /locus_tag="VSAL_I0951" FT misc_feature 1049340..1049636 FT /gene="nqrC" FT /locus_tag="VSAL_I0951" FT /note="HMMPfam hit to PF04205, FMN-binding domain, score FT 1.8e-27" FT /inference="protein motif:HMMPfam:PF04205" FT CDS 1049684..1050313 FT /transl_table=11 FT /gene="nqrD" FT /locus_tag="VSAL_I0952" FT /old_locus_tag="TVS0817" FT /product="Na+-translocating NADH-quinone reductase subunit FT D" FT /db_xref="GOA:B6EIC6" FT /db_xref="InterPro:IPR003667" FT /db_xref="InterPro:IPR011292" FT /db_xref="UniProtKB/TrEMBL:B6EIC6" FT /protein_id="CAQ78637.1" FT /translation="MNTKDLKKNILAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTI FT AVMFVTAFSNFFVSLIRNHIPSSVRIIVQMAIIASLVIVVDQILRAYLYDISKQLSVFV FT GLIITNCIVMGRAEAFAMKSKPLPSFIDGIGNGLGYGFVLITVAFFRELLGSGKLFGVE FT VLPLVSNGGWYQPNGLMLLAPSAFFLIGFMIWAIRIFKPEQVEAKE" FT misc_feature 1049690..1050268 FT /gene="nqrD" FT /locus_tag="VSAL_I0952" FT /note="HMMPfam hit to PF02508, Rnf-Nqr subunit, membrane FT protein, score 1.7e-92" FT /inference="protein motif:HMMPfam:PF02508" FT misc_feature order(1049798..1049866,1049894..1049962,1049981..1050049, FT 1050215..1050283) FT /gene="nqrD" FT /locus_tag="VSAL_I0952" FT CDS 1050321..1050917 FT /transl_table=11 FT /gene="nqrE" FT /locus_tag="VSAL_I0953" FT /old_locus_tag="TVS0818" FT /product="Na+-translocating NADH-quinone reductase subunit FT E" FT /db_xref="GOA:B6EIC7" FT /db_xref="InterPro:IPR003667" FT /db_xref="InterPro:IPR010967" FT /db_xref="UniProtKB/Swiss-Prot:B6EIC7" FT /protein_id="CAQ78638.1" FT /translation="MEHYISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGVAV FT VVVLTLAVPLNNLVYTYLLKDGALVEGVDLSFLNFITFIGVIAALVQILEMVLDRFFPP FT LYNALGIFLPLITVNCAIFGGVSFMVQRDYNFTESIVYGFGSGVGWMLAIVALAGIREK FT MKYSDVPPGLRGLGITFITVGLMALGFMSFSGVQL" FT misc_feature 1050321..1050914 FT /gene="nqrE" FT /locus_tag="VSAL_I0953" FT /note="HMMPfam hit to PF02508, Rnf-Nqr subunit, membrane FT protein, score 6.3e-115" FT /inference="protein motif:HMMPfam:PF02508" FT misc_feature order(1050354..1050413,1050441..1050509,1050546..1050614, FT 1050642..1050710,1050735..1050803,1050846..1050908) FT /gene="nqrE" FT /locus_tag="VSAL_I0953" FT CDS 1050947..1052173 FT /transl_table=11 FT /gene="nqrF" FT /locus_tag="VSAL_I0954" FT /old_locus_tag="TVS0819" FT /product="NADH-uniquinone oxidoreductase subunit F" FT /db_xref="GOA:B6EIC8" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR001709" FT /db_xref="InterPro:IPR008333" FT /db_xref="InterPro:IPR010205" FT /db_xref="InterPro:IPR012675" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="UniProtKB/TrEMBL:B6EIC8" FT /protein_id="CAQ78639.1" FT /translation="MQSIILGVAMFTIIVLILVLVILFAKSKLVPAGDITISVNGDPEK FT AIITQPGSKLLSALGSAGIFVSSACGGGGSCGQCRVKVKSGGGDILPTELDHISKGEAR FT EGERLACQVAMKTDMEIELPEEIFGVKKWECTVTSNDNEATFIKELVLAIPDGEEVPFR FT AGGYIQIEAEPHHIKYADYDIPEEYRGDWDKFNLFRYESIVKEHSIRAYSMASYPEEKG FT IIKLNVRIATPPPNNPNVAPGIMSSYIWSLKEGDKCTISGPFGEFFAKDTDNEMVFIGG FT GAGMAPMRSHIFDQLLRLKSTRKMSYWYGARSKREMFYVEDFDGLAANNDNFVWHCALS FT DPMPEDNWDGYTGFIHNVLYENYLKDHEAPEDCEYYMCGPPMMNAAVISMLKDLGVEDE FT NILLDDFGG" FT sig_peptide 1050947..1051021 FT /gene="nqrF" FT /locus_tag="VSAL_I0954" FT misc_feature 1050953..1051021 FT /gene="nqrF" FT /locus_tag="VSAL_I0954" FT misc_feature 1051055..1051297 FT /gene="nqrF" FT /locus_tag="VSAL_I0954" FT /note="HMMPfam hit to PF00111, 2Fe-2S iron-sulfur cluster FT binding doma, score 8.3e-13" FT /inference="protein motif:HMMPfam:PF00111" FT misc_feature 1051346..1051750 FT /gene="nqrF" FT /locus_tag="VSAL_I0954" FT /note="HMMPfam hit to PF00970, Oxidoreductase FAD-binding FT domain, score 0.00012" FT /inference="protein motif:HMMPfam:PF00970" FT misc_feature 1051775..1052113 FT /gene="nqrF" FT /locus_tag="VSAL_I0954" FT /note="HMMPfam hit to PF00175, Oxidoreductase NAD-binding FT domain, score 8.6e-18" FT /inference="protein motif:HMMPfam:PF00175" FT CDS 1052339..1053376 FT /transl_table=11 FT /locus_tag="VSAL_I0955" FT /old_locus_tag="TVS0820" FT /product="thiamine biosynthesis lipoprotein ApbE precursor" FT /db_xref="InterPro:IPR003374" FT /db_xref="InterPro:IPR024932" FT /db_xref="UniProtKB/TrEMBL:B6EIC9" FT /protein_id="CAQ78640.1" FT /translation="MIVSVTHLVNRTKLILLSCFALLLLTGCGEQQREQVYLNGPTMGT FT SYNIKFINKDGLPKQDVIHAEIDKRLELVNDQMSTYRKDSELSQFNQSTALTPFTVSKD FT TATVISEAIRLNKVTLGALDITVGPLVNIWGFGPEARPEVVPTEDELNARRAIVGIQHL FT SATETTVTKDIPNLYVDLSTIAKGWGVDVVANYLEGLGITDYMVEVGGEMRVKGNNKEN FT VAWRIAIEKPTVDERSIQEIIEPGHHAVATSGDYRIYFEKEGVRYSHIINPITGNPIAN FT KVVSVTVLDKSSMTADGLATGLMVLGEEQGMAVANKHNIPVFMIVKTKNGFKELSSEAF FT KPFLK" FT sig_peptide 1052339..1052434 FT /locus_tag="VSAL_I0955" FT misc_feature 1052381..1053328 FT /locus_tag="VSAL_I0955" FT /note="HMMPfam hit to PF02424, ApbE family, score 7.8e-108" FT /inference="protein motif:HMMPfam:PF02424" FT misc_feature 1052390..1052422 FT /locus_tag="VSAL_I0955" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1053388..1053621 FT /transl_table=11 FT /locus_tag="VSAL_I0956" FT /old_locus_tag="TVS0821" FT /product="putative exported protein" FT /db_xref="InterPro:IPR007495" FT /db_xref="UniProtKB/TrEMBL:B6EID0" FT /protein_id="CAQ78641.1" FT /translation="MNTFLITFGVFLTVIGAMAIGYIVQRKVVKGSCGGLGSVGIDKVC FT NCPEPCDARKKREAKEIIRAEKLAAWEKDRIA" FT sig_peptide 1053388..1053444 FT /locus_tag="VSAL_I0956" FT misc_feature 1053400..1053459 FT /locus_tag="VSAL_I0956" FT misc_feature 1053451..1053585 FT /locus_tag="VSAL_I0956" FT /note="HMMPfam hit to PF04400, Protein of unknown function FT (DUF539), score 7.4e-24" FT /inference="protein motif:HMMPfam:PF04400" FT CDS 1053775..1054689 FT /transl_table=11 FT /gene="dinB" FT /locus_tag="VSAL_I0957" FT /old_locus_tag="TVS0822" FT /product="DNA polymerase IV" FT /EC_number="2.7.7.7" FT /db_xref="GOA:B6EID1" FT /db_xref="InterPro:IPR001126" FT /db_xref="InterPro:IPR017961" FT /db_xref="InterPro:IPR017962" FT /db_xref="InterPro:IPR017963" FT /db_xref="InterPro:IPR022880" FT /db_xref="UniProtKB/TrEMBL:B6EID1" FT /protein_id="CAQ78642.1" FT /translation="MRKIIHIDMDCFYAAVEMRDNPVLRDVPLAVGGSERQRGVLSTCN FT YQARKFGLHSAMPTGRALSLCPHLVVVPGRMQVYKQVSHHIHRIFRRYTDKIEPLSLDE FT AYLDVSECTLLHGSATLIAQQIRRDIFNELQLTASAGIAPLKFLAKIASDLNKPDGQYV FT ITPNMVMDEIDSLPLEKIPGVGKVSLERLHRSGLHTCKDVQQFDQRELLLLFGKMGASL FT WKRSHGIDEREVITERNRKSVGVERTFSHNISMFEECWEVIKTRLYPELESRLIKANGD FT NYIAKQGIKIKFADFQHFPNACF" FT misc_feature 1053793..1054686 FT /gene="dinB" FT /locus_tag="VSAL_I0957" FT /note="HMMPfam hit to PF00817, impB/mucB/samB family,score FT 8.4e-90" FT /inference="protein motif:HMMPfam:PF00817" FT CDS join(1054998..1055513,1056521..1057528) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0958" FT /old_locus_tag="TVS0823" FT /product="hypothetical protein (pseudogene)" FT /note="Similar to Neisseria gonorrhoeae Hypothetical FT protein UniProt:Q5F7I0 (539 aa) fasta scores: FT E()=1.2e-29,53.977% id in 176 aa. The CDS is disrupted by FT the insertion of an IS element after codon 172 and may be FT truncated at the N-terminus" FT /db_xref="PSEUDO:CAQ78643.1" FT /inference="similar to sequence:UniProt:Q5F7I0" FT repeat_region 1055516..1056520 FT /note="VSa6" FT repeat_region 1055516..1055534 FT /note="IR of VSa6" FT CDS 1055612..1056493 FT /transl_table=11 FT /locus_tag="VSAL_I0959" FT /old_locus_tag="TVS0825" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ78644.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 1055938..1056433 FT /locus_tag="VSAL_I0959" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 3.2e-25" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 1056502..1056520 FT /note="IR of VSa6" FT CDS complement(1057929..1058141) FT /transl_table=11 FT /gene="ahdIC" FT /locus_tag="VSAL_I0960" FT /old_locus_tag="TVS0827" FT /product="DNA methyltransferase" FT /product="c.ahdi" FT /db_xref="GOA:B6EID4" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:B6EID4" FT /protein_id="CAQ78645.1" FT /translation="MKYLAANFGKKLREIRKVKGVSQDKLALIADIDRSYVGRIERGEV FT NITLEKVYKLADALECDVTELLPLT" FT misc_feature complement(1057944..1058108) FT /gene="ahdIC" FT /locus_tag="VSAL_I0960" FT /note="HMMPfam hit to PF01381, Helix-turn-helix, score FT 1.6e-15" FT /inference="protein motif:HMMPfam:PF01381" FT misc_feature complement(1058016..1058081) FT /gene="ahdIC" FT /locus_tag="VSAL_I0960" FT /note="Predicted helix-turn-helix motif with score FT 1184.000, SD 3.22 at aa 21-42, sequence FT VSQDKLALIADIDRSYVGRIER" FT CDS 1058250..1058786 FT /transl_table=11 FT /locus_tag="VSAL_I0961" FT /old_locus_tag="TVS0828" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EID5" FT /protein_id="CAQ78646.1" FT /translation="MTTKSIDLNHSLYKILIEDQLDSFSVLELRDAFMKSSELLQDKDN FT VRRFVYRHILRLERMQLLERVIEKTSQKAKYRKTVLFSKAVWNTVIEERAPELIEPKHQ FT EGSFLFPKMTLQKRLEQCESDFLACIHEFETYKSLCSEYPHLADSLLDVQGQTKTQSSK FT LVGEMRAIKMALTLS" FT CDS 1058783..1060183 FT /transl_table=11 FT /locus_tag="VSAL_I0962" FT /old_locus_tag="TVS0829" FT /product="putative type III restriction enzyme" FT /db_xref="GOA:B6EID6" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR006935" FT /db_xref="InterPro:IPR014001" FT /db_xref="UniProtKB/TrEMBL:B6EID6" FT /protein_id="CAQ78647.1" FT /translation="MMPLRQWQAECVKLTLERYDSGHQHFLCLATPGAGKSVMAAEVAF FT SLFKGNKIDFVLCFSPSTAISQGLEQTFTSRLNCRFDGIIGALGASYTYQNLQFFDDKF FT WELIKKNRVLVVFDEIHHCAGSSLKDANSWGEKIIENIQFQATYTLALSGTPWRSDKAP FT ICLSNYINPNNEIECNYVYGLNQAISDGVCRSPKIVLVDNEKITLKSSKSEAKSFTCIN FT DFLNDSFGSYQTLINDEKCMMYLLEKGIEKLEKIRKNKKNAAGLVVASSVEHAIRLFSI FT LSNEFKKDTVLVTYKHNDPTSTINHFRHSEAEWIVSVGMVSEGTDIPRLQVCCHLSRVK FT TELYFRQVLGRILRVNNGDNQEAWLYTFAEPNLVEYAHRIDQEIPEQNLIFCEDMDVAV FT FTPLEPKENDSKGLISDIRIGLGEWCPLNEKSSEFPFTGVSNYLEESDEHYFDIVGSFR FT QQIVDVFR" FT misc_feature 1058783..1059256 FT /locus_tag="VSAL_I0962" FT /note="HMMPfam hit to PF04851, Type III restriction enzyme, FT res subunit, score 3.2e-08" FT /inference="protein motif:HMMPfam:PF04851" FT misc_feature 1058870..1058893 FT /locus_tag="VSAL_I0962" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1060435..1061100) FT /transl_table=11 FT /locus_tag="VSAL_I0963" FT /old_locus_tag="TVS0830" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR018742" FT /db_xref="UniProtKB/TrEMBL:B6EID7" FT /protein_id="CAQ78648.1" FT /translation="MEIRDVHLVESINKFIFQWQIKGLVHDSRNHSVFRKAGGLKEITW FT GNDGYILKDEEFSSISEYCSLVENRQYSMLLCDGSLFQISYTLDRSTIVKHRLCWYPCP FT IHVDSSDLDGNDITDIILEKMSTGDIESFRARSPLRFDYAPSQATEDHPTVHMHLSEET FT CRIPVKSPLCLKEFVTFIVRNFYDVLTQDPSLYQNLKTWGRIDTLTQEQKNRLHINTL" FT CDS complement(join(1061107..1061691,1061694..1063199)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0964" FT /old_locus_tag="TVS0831" FT /product="hypothetical protein (pseudogene)" FT /note="Similar to Agrobacterium tumefaciens (strain FT C58/ATCC 33970) Hypothetical protein UniProt:Q8UI64 (718 FT aa) fasta scores: E()=2.2e-102, 41.443% id in 707 aa. CDS FT contains a frameshift after codon 502. The sequence has FT been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ78649.1" FT /inference="similar to sequence:UniProt:Q8UI64" FT misc_feature complement(1061964..1061984) FT /locus_tag="VSAL_I0964" FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT /inference="protein motif:ProSite:PS00092" FT misc_feature complement(1062564..1062587) FT /locus_tag="VSAL_I0964" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1063619..1064671) FT /transl_table=11 FT /gene="dinB" FT /locus_tag="VSAL_I0965" FT /old_locus_tag="TVS0833" FT /product="DNA polymerase IV" FT /EC_number="2.7.7.7" FT /db_xref="GOA:B6EID9" FT /db_xref="InterPro:IPR001126" FT /db_xref="InterPro:IPR017961" FT /db_xref="InterPro:IPR017962" FT /db_xref="InterPro:IPR017963" FT /db_xref="InterPro:IPR022880" FT /db_xref="UniProtKB/TrEMBL:B6EID9" FT /protein_id="CAQ78650.1" FT /translation="MSQKIIHIDLDCYYAAVEARDNPELRGIPIAIGGSQHHRGVLSTC FT NYEAREFGVRSAMSTAKALQLCPNLTVVPGNMDKYKTVSKQIHKIFSEYTDLIEPLSLD FT EAYLDVTDSPLFHGSATLIAEDIRKTIWNELQLTASAGVAPLKFIAKVASDVDKPNGIC FT VVPPNKLDSFIEQLELGKISGVGKVTLEKLHKFGFYKGQDIRECDHHTLLSNFGKFGQV FT IWERCNGIDNRKIETNRTRKSVGVERTFQTDIYSEQECIEAIEVLYPKLIERLQKSSSN FT NSIIKQGLKLKFQDFKQTTIEHKKSQLDKDYFLELLREGLKRQQNRGIRLIGISIGLNT FT EKDSGQINLF" FT misc_feature complement(1063649..1064650) FT /gene="dinB" FT /locus_tag="VSAL_I0965" FT /note="HMMPfam hit to PF00817, impB/mucB/samB family,score FT 7.1e-102" FT /inference="protein motif:HMMPfam:PF00817" FT misc_feature complement(1064087..1064152) FT /gene="dinB" FT /locus_tag="VSAL_I0965" FT /note="Predicted helix-turn-helix motif with score 974.000, FT SD 2.50 at aa 174-195, sequence IEQLELGKISGVGKVTLEKLHK" FT CDS complement(1064843..1066204) FT /transl_table=11 FT /locus_tag="VSAL_I0966" FT /old_locus_tag="TVS0834" FT /product="putative phage recombinase/integrase" FT /note="Similar to Bacillus subtilis Tyrosine recombinase FT XerC UniProt:P39776 (304 aa) blastp scores: E()=3e-04. Lack FT of similarity at the N-terminus in comparison to other FT proteins" FT /db_xref="GOA:B6EIE0" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:B6EIE0" FT /inference="similar to sequence:UniProt:P39776" FT /protein_id="CAQ78651.1" FT /translation="MPYRKLRNFKSWSHIDPLSKKLKFNYSKDIQFFTWSNHNPCYEAN FT MFVHQRMLAKIANSTLKQEAGLIIHLIHFVEQQPSLTSFNQLTDATFTLFVQNLQNERE FT PTGELKRSNNRVIDIAEKCLDFLKFIQDLNDLSHFIGSDKANAIRTTEKPYKIKIDGHK FT GYKICISISHNSIPSKDAIRTRHPISSSDSLKLWNYLKAQPVGRDKRTRDKAMYVVMEQ FT LGARITEFHLITISDYEEARKTGSIKLTTLKRKEDKHRFLPIPQMVLNYIAPYIKIRKR FT VMNKKRTKHDMLFINLNNGEAFSPSSWGAYLNQWKREIGIEGNLHAHLYRHAFITDKLK FT EIILAHNEINGKDGFRKHLLHTKAFKQELQQWTGHTLLSSLDTYIDLVFEDINGYTETY FT NAVSLKNSVTLIKRQLTDLKDIYKKKELTLGEYNLRLNEMLNSFEQDIDNSINT" FT misc_feature complement(1065023..1065610) FT /locus_tag="VSAL_I0966" FT /note="HMMPfam hit to PF00589, Phage integrase family,score FT 0.02" FT /inference="protein motif:HMMPfam:PF00589" FT CDS complement(1066206..1066727) FT /transl_table=11 FT /locus_tag="VSAL_I0967" FT /old_locus_tag="TVS0835" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIE1" FT /protein_id="CAQ78652.1" FT /translation="MSAKEINQIKVFNTIAFLKCIITTPHKFKNDEVLKKALKSQTGIA FT KYENKDQEITICSLNTLKTTSDTLLGRGFLELNELRLNAKDALENTIEGKKSNKRTKTG FT LNNRVTELEAKLDIAYRSNFLLTTMISELRSQLKQIAIYEGSVEERKELYRKFNEGAET FT KLSYTLNGKF" FT CDS complement(1066728..1069151) FT /transl_table=11 FT /locus_tag="VSAL_I0968" FT /old_locus_tag="TVS0836" FT /product="hypothetical protein, putative phage gene" FT /note="Weakly similar to Pseudomonas syringae pv. tomato FT site-specific recombinase, phage integrase family domain FT protein. UniProt:Q87W32 (EMBL:AE016853) (698 aa) fasta FT scores: E()=1e-14, 26.775% id in 676 aa. Lack of similarity FT at both the N- and C-terminus in comparison to the FT Pseudomonas syringae pv. tomato site-specific recombinase" FT /db_xref="UniProtKB/TrEMBL:B6EIE2" FT /inference="similar to sequence:UniProt:Q87W32" FT /protein_id="CAQ78653.1" FT /translation="MLKPHLKLIEDIKSEERTFSSLSKFELEEMYKISIASGDFTALRM FT LTNHNTGIYNYNEREPSWLDSEFWAPIWTLMLTSKPKTIRWDSVFLNDGKKLTDPKHIK FT LLNAFKYWITATDNPLENGGNIEFSKKTIYIKVTYIIKLINAILLHSKELQLAEYHLLH FT VDDSFWLSIFSNMATYDPFEGVYRFKDRIKALIDKEATTISDEECVNFVAKYPLLLSKL FT PTDDLSIYPENRQKSCVWLFKQGYYKSYKGKPKYDGNSAVLTRLILNGKCLFEDINTPN FT FVEFHLKQKKTSTEYIPINNHDSSIGMNAQSLGQYISYLKLIHTNLDRNDSCTPSMITD FT TLTINSINNIKGVHLKKTMRTRTQPPSLIFNLIEKCFQFTQENQDELLNQCLTALKEGR FT SKLGKSNSNKLKPQATFKAFDEAIHSDMSGSERGHWFDTEAINCVTSKWKKKGIKQVAA FT FDIKTPNRHQRIRNNESLFELFQALEGSVQFLVGAIMARRQDELSSLKPYGNLIPNKNP FT FSIDDEDYFIKKGKDGSVKAQYNLKFKLKKSGYKGKNTHLIRPIPVSIAKLIWRLEEFN FT QETEKAGLTTGKLSLFNSLESKACNLSAANTHSFNNNYDAMCDYFETDLVLMDSGEYRR FT NYIRQHQLRRFFALVFFWSKKKESFDALRWMLGHTDMEHLYHYISESETGAVLNSAKAS FT VLASSVLNKDISDVDAKQLDKLRELLVKRLAGNERAEVIINTLSNTIDDYHESDYETTP FT HISVIEKNQIMENEVLRLLDNEVISLEPNFFIVTTPNGSTESTFNLTLTFNEIN" FT misc_feature complement(1067937..1067960) FT /locus_tag="VSAL_I0968" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1069145..1071484) FT /transl_table=11 FT /locus_tag="VSAL_I0969" FT /old_locus_tag="TVS0837" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIE3" FT /protein_id="CAQ78654.1" FT /translation="MNSSTLKSLSKLEVIRSSKYFEWLNSIARTHINDDSYRNRVLNIY FT AAYIYITEPKPYSFSGTNILNNSHAINEHLQLLIGFIYSEISFGTRAKYDHTRYVYAIF FT STIASNLQLSLSSIDIKKSRISDDITQYIVEYNDLDLNQGKLNYLNGWQIKSKEGAVLE FT VNLDSIFCQYGSNFTEKIHHALQNYGLKHKSATLKSTTSALCYHLLYFFTLNKNQSLKE FT LYIKLSARNVQHYFAEIMDIGFARAKIEGHDENTFYILWNRAIQTYIVCFIKIGFFEAP FT IKPFLTPKWKKPVNENLSFSIGGKTTENEAERWFSNIGLHIKDEEAVAEIQYRLNKDLN FT YIHLVCTHIFEQVKAINIRNKKYLLAGKIKPLKKLTHNDQCPIGPENLENTIATFFHHG FT IGGKHNAYSSFLGFVGNTPLLTKELALPTLLTLNAILSLLILNHPKITPSWLQEWELLD FT KKGNRSGYKQVGDQWMIISLKNRRGATLAQQEVVLNKKSKEIVDFLIEHTLLARERLKA FT LGDANWRKMIITATPSKVATYKSLGSSLSCDISFYETLRNYKNLPHGHILNQNDVNAIS FT EIFSLRSLRRHRGLQIYLETESMGAVARALGHKRVQLHLLEGVYLPKPLMDFFLERIIR FT QFQNSILFEAMKESQYLLDAVDISEGNITEFLEHHGISDIPFYLGNSANTQTKVKDIVL FT SFDGIVFTISTALLQLLIAIKTTVETAIEDTQFKEIVEHWYQCALFILLSLETDQYNEE FT DDYKNMLENARANPMDNNRIMGALIC" FT CDS 1071603..1071794 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0970" FT /old_locus_tag="TVS0838" FT /product="DNA polymerase IV (fragment)" FT /EC_number="2.7.7.7" FT /note="Similar to C-terminal part of Vibrio fischeri DNA FT polymerase IV UniProt:Q5E6W7 (365 aa) fasta scores: id FT E()=1.3e-11, 70.492%; ungapped id 61 aa overlap. The CDS FT appears to be truncated at the N-terminus. The sequence has FT been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ78655.1" FT /inference="similar to sequence:UniProt:Q5E6W7" FT CDS join(1072025..1072315,1073323..1074243) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I0971" FT /old_locus_tag="TVS0839" FT /product="alanine racemase (pseudogene)" FT /EC_number="5.1.1.1" FT /note="Similar to Mycobacterium tuberculosis alanine FT racemase Alr UniProt:P0A4X2 (386 aa) fasta scores: FT E()=2.8e-11, 28.077% id in 260 aa. CDS is disrupted by the FT insertion of an IS element after codon 98" FT /db_xref="PSEUDO:CAQ78656.1" FT /inference="similar to sequence:UniProt:P0A4X2" FT sig_peptide 1072025..1072084 FT /locus_tag="VSAL_I0971" FT misc_feature order(1072139..1072315,1073323..1073835) FT /locus_tag="VSAL_I0971" FT /note="HMMPfam hit to PF01168, Alanine racemase,N-terminal FT domain, score 4.6e-47" FT /inference="protein motif:HMMPfam:PF01168" FT repeat_region complement(1072318..1073322) FT /note="VSa6" FT repeat_region complement(1072318..1072336) FT /note="IR of VSa6" FT CDS complement(1072345..1073226) FT /transl_table=11 FT /locus_tag="VSAL_I0972" FT /old_locus_tag="TVS0840" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ78657.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature complement(1072405..1072899) FT /locus_tag="VSAL_I0972" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(1073304..1073322) FT /note="IR of VSa6" FT misc_feature 1073854..1074240 FT /locus_tag="VSAL_I0971" FT /note="HMMPfam hit to PF00842, Alanine racemase,C-terminal FT domain, score 1.9e-37" FT /inference="protein motif:HMMPfam:PF00842" FT misc_feature 1073896..1073943 FT /locus_tag="VSAL_I0971" FT /note="PS00038 Myc-type, 'helix-loop-helix' dimerization FT domain signature." FT /inference="protein motif:ProSite:PS00038" FT CDS complement(1074320..1075774) FT /transl_table=11 FT /locus_tag="VSAL_I0973" FT /old_locus_tag="TVS0842" FT /product="aminoacyl-histidine dipeptidase" FT /EC_number="3.4.13.3" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EIE7" FT /db_xref="InterPro:IPR001160" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:B6EIE7" FT /protein_id="CAQ78658.1" FT /translation="MSEISQLTPQPIWQFFDKICSIPHPSKHEDALAQYIIDWATSEGL FT DVRRDPTGNVFIKKAATPGMEDRKGVVLQAHIDMVPQKNEDTDHDFTNDPILPYIDGEW FT VTAKGTTLGADNGMGMASCLAVLASKELKHGPLEVLLTIDEEAGMTGAFGLEAGWLEGD FT ILLNTDSEQEGEIYMGCAGGADGAIKLMIEREALPAGYVTRQITLKGLKGGHSGCDIHT FT GRGNANKLLGRFLAGHAVELDLRLVEFRGGSLRNAIPREAFATVAVPAENEAKLAELFT FT FYTDLLKDELGRVETNIVSINETASAENVLTLATQTPFIATLNACPNGVIRMSDDIEGV FT VETSLNVGVITTEESTITILCLIRSLMDSGRSMVEGMLSSVAELAGAQVSFSGTYPGWK FT PDADSEIMHVFRDVYEGIYGNKPNIMVIHAGLECGLFKEPYPKMDMISFGPTIKFPHSP FT DEKVKIDTVALYWEQMVAILENIPKK" FT misc_feature complement(1074335..1075561) FT /locus_tag="VSAL_I0973" FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40, score 5e-10" FT /inference="protein motif:HMMPfam:PF01546" FT misc_feature complement(1074890..1075159) FT /locus_tag="VSAL_I0973" FT /note="HMMPfam hit to PF07687, Peptidase dimerisation FT domain, score 1e-16" FT /inference="protein motif:HMMPfam:PF07687" FT CDS 1076578..1077870 FT /transl_table=11 FT /locus_tag="VSAL_I0974" FT /old_locus_tag="TVS0843" FT /product="membrane permease" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EIE8" FT /db_xref="InterPro:IPR006043" FT /db_xref="UniProtKB/TrEMBL:B6EIE8" FT /protein_id="CAQ78659.1" FT /translation="MLEKLFQLKANGTNVRTEIIAGLTTFLTMAYVIFVNPAILADAGM FT DKGAVFVATCIAAAIGCFIMGFVANFPIAQAPGMGLNAFFTYTVVLGMGHTWQVALAAV FT FMSGVLFILLSLCKIRELIINSIPLSLRTGISAGIGLFLAFIALKNSGIVVDNPATLLS FT IGHINSFPAAMGALALFLTIALVHRGYKAAVMIAILAVTGLALLFGEVQYAGIMSMPPS FT LAPTFLQLDFSGAFDIGMLSVVFAFLFVDLFDTAGTLVGVSQKAGIMDKDGNIPRLNRA FT LLADSTATSVGALLGTSNTTSYIESVAGVAAGGRTGLTAVVVGILFLLALFFAPLAGMV FT PAYATAGALFYVAILMMSGLVSIDWRDLTEAAPVVVVCLLMPLTFSIADGISLGFISYA FT AIKLLSGKGRDVHISVWVLAALFTLKFIFTA" FT misc_feature 1076623..1077756 FT /locus_tag="VSAL_I0974" FT /note="HMMPfam hit to PF00860, Permease family, score FT 1.2e-40" FT /inference="protein motif:HMMPfam:PF00860" FT misc_feature order(1076632..1076700,1076719..1076787,1076857..1076925, FT 1076962..1077021,1077064..1077132,1077151..1077219, FT 1077295..1077363,1077511..1077579,1077592..1077660, FT 1077697..1077765,1077808..1077861) FT /locus_tag="VSAL_I0974" FT misc_feature 1076917..1077792 FT /locus_tag="VSAL_I0974" FT /note="HMMPfam hit to PF00916, Sulfate transporter FT family,score 0.00051" FT /inference="protein motif:HMMPfam:PF00916" FT CDS 1077908..1078366 FT /transl_table=11 FT /gene="gpt" FT /locus_tag="VSAL_I0975" FT /old_locus_tag="TVS0844" FT /product="xanthine phosphoribosyltransferase FT (xanthine-guanin phosphoribosyltransferase)" FT /EC_number="2.4.2.22" FT /db_xref="GOA:B6EIE9" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR023747" FT /db_xref="UniProtKB/Swiss-Prot:B6EIE9" FT /protein_id="CAQ78660.1" FT /translation="MANKFVITWDNMQMYTRQLAEQLLPAEQWKGILAVSRGGLVPAAI FT LARELNIRYVDTVCISSYDHDHQRDMTVVKAMEGDGEGFIIIDDLVDSGDTAVKLRQMY FT PKGKLVTVCAKPAGIDLVDAYVVDIPQDTWIEQPWDMAVTYVDPICKK" FT misc_feature 1077908..1078273 FT /gene="gpt" FT /locus_tag="VSAL_I0975" FT /note="HMMPfam hit to PF00156, Phosphoribosyl transferase FT domain, score 1.3e-14" FT /inference="protein motif:HMMPfam:PF00156" FT misc_feature 1078157..1078195 FT /gene="gpt" FT /locus_tag="VSAL_I0975" FT /note="PS00103 Purine/pyrimidine phosphoribosyl FT transferases signature." FT /inference="protein motif:ProSite:PS00103" FT CDS 1078525..1079766 FT /transl_table=11 FT /locus_tag="VSAL_I0976" FT /old_locus_tag="TVS0845" FT /product="putative esterase" FT /EC_number="3.1.-.-" FT /db_xref="GOA:B6EIF0" FT /db_xref="InterPro:IPR010520" FT /db_xref="UniProtKB/TrEMBL:B6EIF0" FT /protein_id="CAQ78661.1" FT /translation="MTQPESENLSVKLFKTNKQALETSCLVPYLPSSLEQISKNSERNW FT YRELRRPQWIWQGVYPIELEGILSKMASSDKDRTKPEWLDTVTGYRAGNWAYEWINAGM FT EHQKCASDLEGNEAAERLFKASLYFSIAGYPHIKGDNLATQAQVLASKAYDMAAKQTSH FT RIEKILVPYDGRKITCYLHLPNTEKPLPVVIVSGGMDSLQTDMWSLYRDYLAPNNMAML FT TLDMPSIGHSSYWPLTEDSSCLHQAVLNYLPHIPWVDRFHAAVMGFRFGGNVALRLSFL FT EPNKLKTCVALGAPIHQVLSNSTQLKKMPKMYLDILASRLAKQVVDVNSLTGQMKAWSL FT KFQGFLSGGRKTSVSILAIGLAGDPVSPKSDNKLAAMFSKYGKGVELKNKTLHSGYEDA FT LNQMIEWIKEEMKH" FT misc_feature 1078534..1079760 FT /locus_tag="VSAL_I0976" FT /note="HMMPfam hit to PF06500, Alpha/beta hydrolase of FT unknown function (DU, score 3.1e-230" FT /inference="protein motif:HMMPfam:PF06500" FT CDS 1079931..1081040 FT /transl_table=11 FT /gene="proB" FT /locus_tag="VSAL_I0977" FT /old_locus_tag="TVS0846" FT /product="glutamate 5-kinase" FT /EC_number="2.7.2.11" FT /db_xref="GOA:B6EIF1" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR001057" FT /db_xref="InterPro:IPR002478" FT /db_xref="InterPro:IPR005715" FT /db_xref="InterPro:IPR011529" FT /db_xref="InterPro:IPR015947" FT /db_xref="InterPro:IPR019797" FT /db_xref="UniProtKB/Swiss-Prot:B6EIF1" FT /protein_id="CAQ78662.1" FT /translation="MNTQSQTIVVKLGTSVLTGGTLKLDRAHMVELVRQCVHLKKLGHQ FT VIVVTSGAIAAGREHLNYPELPKTMANKQLLAAVGQSCLIQAWQSLFAIYGVNVGQMLL FT TRADLDDRERYLNARDMLQALLKNGIVPIVNENDAVATNEIKVGDNDNLSALVGILASA FT DKLLLLTDQSGLFTADPRKDPKAELIKEVHTIDETLRKIAGGSGTALGTGGMATKLQAA FT DIARRAGIEVVIAAGSAENVITDVVDSKPQGTKFLPVECALESRKRWILAGPASNGTIV FT IDDGAVNAVQQKGSSLLSKGISSISGHFVRGGVAKIVNTKGELIARGISRYSSDDLHKI FT LGKHSQDIYAVLGYEYGPVAIHRDDLVLI" FT misc_feature 1079946..1080638 FT /gene="proB" FT /locus_tag="VSAL_I0977" FT /note="HMMPfam hit to PF00696, Amino acid kinase FT family,score 9.6e-62" FT /inference="protein motif:HMMPfam:PF00696" FT misc_feature 1080552..1080617 FT /gene="proB" FT /locus_tag="VSAL_I0977" FT /note="PS00902 Glutamate 5-kinase signature." FT /inference="protein motif:ProSite:PS00902" FT misc_feature 1080762..1080986 FT /gene="proB" FT /locus_tag="VSAL_I0977" FT /note="HMMPfam hit to PF01472, PUA domain, score 4e-24" FT /inference="protein motif:HMMPfam:PF01472" FT CDS 1081071..1082312 FT /transl_table=11 FT /gene="proA" FT /locus_tag="VSAL_I0978" FT /old_locus_tag="TVS0847" FT /product="gamma-glutamyl phosphate reductase" FT /EC_number="1.2.1.41" FT /db_xref="GOA:B6EIF2" FT /db_xref="InterPro:IPR000965" FT /db_xref="InterPro:IPR012134" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="InterPro:IPR016163" FT /db_xref="InterPro:IPR020593" FT /db_xref="UniProtKB/TrEMBL:B6EIF2" FT /protein_id="CAQ78663.1" FT /translation="MGQAAKNAAFDLAVAPTAQKNKALAIIADELEANKEAILAANAKD FT ISAAVEAGISEAMQDRLLLTEERLVAIANDVRNVINLNDPVGSEIDSKMLENGMSLSRR FT RVPIGVIGVIYEARPNVTIDIASLCLKTGNASILRGGKETFFSNMELVKVIQVALEKAG FT LPAASVQYIEKPDRELVSELLRLDDYVDMIIPRGGAGLHKMCKENSSIPVIIGGFGISH FT AFVDDSADLERALLVVDNSKAQRPSACNALDTLLVHEAVAPQFLALLANKMAGRVELVA FT EPKAYSLLKEFKNVSLREAQDGDFDTEWLSYTLGVKVVSDVNEAAAHMQTHNASHSDTI FT LTNNIESAEKFINTAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLEELT FT SYKWVGKADYLIRP" FT CDS complement(1082414..1083379) FT /transl_table=11 FT /gene="lipA" FT /locus_tag="VSAL_I0979" FT /old_locus_tag="TVS0848" FT /product="lipoyl synthase (lipoic acid synthase)" FT /EC_number="2.8.1.-" FT /db_xref="GOA:B6EIF3" FT /db_xref="InterPro:IPR003698" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:B6EIF3" FT /protein_id="CAQ78664.1" FT /translation="MSKPIQMEKGVKYRDADKMALIPVKNMPTEKKEVLRKPEWMKIKL FT PSSSKRIDEIKSAMRKNNLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCDVA FT HGRPVTPEAEEPKKLAKTIKDMKLKYVVITSVDRDDLRDGGAQHFADCNREIRELNPEI FT RIETLVPDFRGRMDRALDAMHSNPPDVFNHNLETAPRLYRKVRPGANYQWSLDLLKKFK FT EQHPTVPTKSGVMMGLGETKEEIVEVLKDLRAHGVTMLTLGQYLAPSRHHLPVERYVPP FT AEFDELKVIALELGFTHAACGPFVRSSYHADLQAKGEEVK" FT misc_feature complement(1082624..1083118) FT /gene="lipA" FT /locus_tag="VSAL_I0979" FT /note="HMMPfam hit to PF04055, Radical SAM FT superfamily,score 9.6e-28" FT /inference="protein motif:HMMPfam:PF04055" FT CDS complement(1083372..1084058) FT /transl_table=11 FT /gene="lipB" FT /locus_tag="VSAL_I0980" FT /old_locus_tag="TVS0849" FT /product="lipoyltransferase (lipoate-protein ligase B)" FT /EC_number="2.3.1.-" FT /db_xref="GOA:B6EIF4" FT /db_xref="InterPro:IPR000544" FT /db_xref="InterPro:IPR004143" FT /db_xref="InterPro:IPR020605" FT /db_xref="UniProtKB/TrEMBL:B6EIF4" FT /protein_id="CAQ78665.1" FT /translation="MILLNKRLVVKNLGRQDYEPVWKAMHTFTDERDENSCDEVWLVEH FT NPVFTQGQAGKEEHVLAAGDIPVVKSDRGGQVTYHGPGQLVAYVLINLRRKKIGVRELV FT THIENTVINTLSQFTIESAARPDAPGVYVDNKKICSLGLRIRKGCSFHGLALNVNMDLS FT PFLRINPCGYAGMEMIQLHDLIKENDTVENKAEHVEDVHPLLIKELTTLLDYTDIEYIT FT ESSHHE" FT misc_feature complement(1083657..1083908) FT /gene="lipB" FT /locus_tag="VSAL_I0980" FT /note="HMMPfam hit to PF03099, Biotin/lipoate A/B protein FT ligase famil, score 1.6e-17" FT /inference="protein motif:HMMPfam:PF03099" FT misc_feature complement(1083795..1083842) FT /gene="lipB" FT /locus_tag="VSAL_I0980" FT /note="PS01313 Lipoate-protein ligase B signature." FT /inference="protein motif:ProSite:PS01313" FT CDS complement(1084196..1084465) FT /transl_table=11 FT /locus_tag="VSAL_I0981" FT /old_locus_tag="TVS0850" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007454" FT /db_xref="UniProtKB/TrEMBL:B6EIF5" FT /protein_id="CAQ78666.1" FT /translation="MQEQPKLKDLLEFPCKFTYKAVGLAHEDLPVLVLEVIQRHAPGDY FT TPHVKASGKGNYNSVSVSITATSIEQVEILYKELADIEMVRMVL" FT misc_feature complement(1084199..1084459) FT /locus_tag="VSAL_I0981" FT /note="HMMPfam hit to PF04359, Protein of unknown function FT (DUF493), score 9.2e-48" FT /inference="protein motif:HMMPfam:PF04359" FT CDS complement(1084621..1085796) FT /transl_table=11 FT /gene="dacA" FT /locus_tag="VSAL_I0982" FT /old_locus_tag="TVS0851" FT /product="penicillin-binding protein 5 precursor FT (D-alanyl-D-alanin carboxypeptidase fraction A)" FT /EC_number="3.4.16.4" FT /db_xref="GOA:B6EIF6" FT /db_xref="InterPro:IPR001967" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR012907" FT /db_xref="InterPro:IPR015956" FT /db_xref="InterPro:IPR018044" FT /db_xref="UniProtKB/TrEMBL:B6EIF6" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ78667.1" FT /translation="MKNSAKQLKRIILSSFILGSTVAVAAPAVIPNAPQIAAKGYVLMD FT YHSGKVLAEKDMNVRMNPASLTKMMTSYVIGQEIASGNISMDDDVVISKNAWAKNFPGS FT SKMFIEVGSVVKVRDLNQGIIVQSGNDACVAMAEHVAGSEDAFVDLMNAWSKTLNLQNT FT HFANVHGLDRDDLYSTPYDMALIGQALIRDVPEEYRVYSEKSYTYNGITQYNRNGLLWD FT KSMNVDGIKTGHTDGAGYNLVSSATEGKMRLVAVVMGTKSGNARKAESKKLLNYGFRFF FT ETVSPHKANETFVTEKVWMGSTDEVALGVAEDTYVTLPRGQAKKMTASFVLEKTLKAPI FT SKGDVVGKLFYQIDGEDIAEYPLLALNNVDEGGIFSRLIDYIVLTFKGWLS" FT misc_feature complement(1084684..1084956) FT /gene="dacA" FT /locus_tag="VSAL_I0982" FT /note="HMMPfam hit to PF07943, Penicillin-binding protein FT 5, C-termina, score 2.6e-41" FT /inference="protein motif:HMMPfam:PF07943" FT misc_feature complement(1085011..1085718) FT /gene="dacA" FT /locus_tag="VSAL_I0982" FT /note="HMMPfam hit to PF00768, D-alanyl-D-alanine FT carboxypeptidase, score 7.5e-124" FT /inference="protein motif:HMMPfam:PF00768" FT misc_feature complement(1085695..1085763) FT /gene="dacA" FT /locus_tag="VSAL_I0982" FT sig_peptide complement(1085722..1085796) FT /gene="dacA" FT /locus_tag="VSAL_I0982" FT CDS complement(1086079..1086888) FT /transl_table=11 FT /locus_tag="VSAL_I0983" FT /old_locus_tag="TVS0852" FT /product="rare lipoprotein A" FT /db_xref="InterPro:IPR007730" FT /db_xref="InterPro:IPR009009" FT /db_xref="InterPro:IPR012997" FT /db_xref="UniProtKB/TrEMBL:B6EIF7" FT /protein_id="CAQ78668.1" FT /translation="MRILLLVISLILVGCASEPPIKNTDEPNAGRYQIDNDIAPNTPIS FT VEHIEDAHPRYEPKSLYGNKDYTLLGKDYPIVRDPKGFKQEGKSSWYGNKFHGHKTSNG FT EIYDMYSMSAAHKTLPIPSYVKVINKDNGKTAIVRVNDRGPFHEGRIIDLSFAAATKLD FT VIKTGTANVKIEYISIDKPTNAQEWHAIDPNQYYIQMVAVKSEQSANSIAKKLQTQFNA FT PTHIVKSKSIYRVRLGPFIDRDIADKTLLDAKNGQYTSAFIIQEAKK" FT misc_feature complement(1086094..1086315) FT /locus_tag="VSAL_I0983" FT /note="HMMPfam hit to PF05036, Sporulation related FT domain,score 3.7e-14" FT /inference="protein motif:HMMPfam:PF05036" FT misc_feature complement(1086367..1086639) FT /locus_tag="VSAL_I0983" FT /note="HMMPfam hit to PF03330, Rare lipoprotein A FT (RlpA)-like double-psi be, score 1.8e-39" FT /inference="protein motif:HMMPfam:PF03330" FT misc_feature complement(1086622..1086645) FT /locus_tag="VSAL_I0983" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT sig_peptide complement(1086841..1086888) FT /locus_tag="VSAL_I0983" FT misc_feature complement(1086844..1086876) FT /locus_tag="VSAL_I0983" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1086892..1088013) FT /transl_table=11 FT /gene="mrdB" FT /locus_tag="VSAL_I0984" FT /old_locus_tag="TVS0853" FT /product="rod shape-determining protein RodA" FT /db_xref="GOA:B6EIF8" FT /db_xref="InterPro:IPR001182" FT /db_xref="InterPro:IPR011923" FT /db_xref="InterPro:IPR018365" FT /db_xref="UniProtKB/TrEMBL:B6EIF8" FT /protein_id="CAQ78669.1" FT /translation="MRVDIASGKNRDFFHRIHIDLPLLLGILLLMACALVIMYSASGQS FT LLMMDKQAMRMLLSLGVMALLAQIPPRTYEVAAPYLFAIGVILLLGVLFFGESSKGAQR FT WLNLGFVRFQPSELIKLAVPLMIARYIGNKPLPPTVRTLFIALLMVFVPTIMIAKQPDL FT GTSILIAASGVFVIFLAGISWKIITAAAIAVGGFIPILWFFLMRPYQKVRVETLFNPES FT DPLGAGYHIIQSKIAIGSGGLFGKGWLHGTQSQLEFIPERHTDFIFAVIAEEWGLIGVM FT VLLTIYLFIIGRGLFLASQAQTAFGRMMGGSVVLSFFVYIFVNIGMVSGILPVVGVPLP FT LVSYGGTSMVTLMAGFGILMSIHTHKKIHSKAN" FT misc_feature complement(1086910..1087953) FT /gene="mrdB" FT /locus_tag="VSAL_I0984" FT /note="HMMPfam hit to PF01098, Cell cycle protein, score FT 2.1e-148" FT /inference="protein motif:HMMPfam:PF01098" FT misc_feature complement(order(1086925..1086993,1087021..1087089, FT 1087123..1087191,1087396..1087455,1087468..1087527, FT 1087540..1087608,1087729..1087788,1087885..1087953)) FT /gene="mrdB" FT /locus_tag="VSAL_I0984" FT misc_feature complement(1086970..1087044) FT /gene="mrdB" FT /locus_tag="VSAL_I0984" FT /note="PS00428 Cell cycle proteins ftsW / rodA / spoVE FT signature." FT /inference="protein motif:ProSite:PS00428" FT sig_peptide complement(1087822..1088013) FT /gene="mrdB" FT /locus_tag="VSAL_I0984" FT misc_feature complement(1087915..1087947) FT /gene="mrdB" FT /locus_tag="VSAL_I0984" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1088013..1089890) FT /transl_table=11 FT /gene="mrdA" FT /locus_tag="VSAL_I0985" FT /old_locus_tag="TVS0854" FT /product="penicillin-binding protein 2" FT /db_xref="GOA:B6EIM7" FT /db_xref="InterPro:IPR001460" FT /db_xref="InterPro:IPR005311" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR017790" FT /db_xref="UniProtKB/TrEMBL:B6EIM7" FT /protein_id="CAQ78670.1" FT /translation="MFKRRRTQIRDYHAESRLFVSRAIVSFVGILVLISLLLTNLYNIQ FT INEFQDYKTRSNDNRIKIVPIAPNRGLIYDRNRMPLAENRPVFNLEITPDKVKDLSALF FT TEIQTILPISQDNIDDFTKERRRTRRFKSIPILSQLTQEQVAIFSVNQHKFSGVEIKAY FT LKRFYPYGKTFTHVLGYVAKINDRDLARLAREEKDANYQATRDIGKLGIERYYEDTLHG FT TAGYQEVEVNSRGRVVRTLKYVPPIPGKDIVLNLDIEIQKFVAKQLDGRRGAAIVLEPN FT TSAVLAMVSSPSYDPNLFVHGISSKNYNALLNNPDRPLVNRATLGIYPPASTVKPFIAV FT SALEEKIVTPLTTRNDPGYWRIPNSKTRPFRDWKRWGHGTVNLKQAIEESVDTFFYQIS FT FDMGIDRLSAWMMKFGFGDYTGIDIHEESKANMPTRDWKVARFRTPWYQGDTIPVGIGQ FT GYWTATPMQIAKATSVLVNRGKVQAPHLLKTIIDGNVETPFEPEPYPPIEGIRDSYWQL FT AIDGMILVNNGAKGTARRVFAGTPYVSAGKSGSSQVFGLNGQEYNADEIAERLRDHALF FT TGFAPAKDPKVIISLVLENGGGGSSQGGPIARSVFDHVLLPATGEVSNK" FT misc_feature complement(1088055..1089074) FT /gene="mrdA" FT /locus_tag="VSAL_I0985" FT /note="HMMPfam hit to PF00905, Penicillin binding protein FT transpeptid, score 7e-89" FT /inference="protein motif:HMMPfam:PF00905" FT misc_feature complement(1089165..1089698) FT /gene="mrdA" FT /locus_tag="VSAL_I0985" FT /note="HMMPfam hit to PF03717, Penicillin-binding Protein FT dimerisatio, score 5.3e-59" FT /inference="protein motif:HMMPfam:PF03717" FT misc_feature complement(1089765..1089833) FT /gene="mrdA" FT /locus_tag="VSAL_I0985" FT CDS complement(1089894..1090364) FT /transl_table=11 FT /locus_tag="VSAL_I0986" FT /old_locus_tag="TVS0855" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EIM8" FT /db_xref="InterPro:IPR003742" FT /db_xref="InterPro:IPR016051" FT /db_xref="UniProtKB/Swiss-Prot:B6EIM8" FT /protein_id="CAQ78671.1" FT /translation="MKLQLIAVGTKMPKWVEEGYKEYSRRFPKDMPLELIEITAGKRGK FT NADIARILQKEGEAMLAAVPKGNRIVTLDIPGKPWNTEQLAEQLEVWKLDARDVSILIG FT GPEGLSPACKTAAEQSWSLSPLTLPHPLVRVVMAESLYRAWSITANHPYHRE" FT misc_feature complement(1089903..1090364) FT /locus_tag="VSAL_I0986" FT /note="HMMPfam hit to PF02590, Uncharacterized ACR,COG1576, FT score 1e-82" FT /inference="protein motif:HMMPfam:PF02590" FT CDS complement(1090368..1090685) FT /transl_table=11 FT /locus_tag="VSAL_I0987" FT /old_locus_tag="TVS0856" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR004394" FT /db_xref="UniProtKB/TrEMBL:B6EIM9" FT /protein_id="CAQ78672.1" FT /translation="MQDKELHDFLFNHVDDMKAENITTVDVRDKSSITDFMIVCTGTSK FT RHVSSIASNVSDKAREAGLIPYGVDGEAEGEWVVVDMGDVMIHILQAEHRELYQLEKLW FT S" FT misc_feature complement(1090371..1090676) FT /locus_tag="VSAL_I0987" FT /note="HMMPfam hit to PF02410, Domain of unknown function FT DUF143, score 2.2e-40" FT /inference="protein motif:HMMPfam:PF02410" FT CDS complement(1090734..1091771) FT /transl_table=11 FT /gene="holA" FT /locus_tag="VSAL_I0988" FT /old_locus_tag="TVS0857" FT /product="DNA polymerase III, delta subunit" FT /EC_number="2.7.7.7" FT /db_xref="GOA:B6EIN0" FT /db_xref="InterPro:IPR005790" FT /db_xref="InterPro:IPR008921" FT /db_xref="InterPro:IPR010372" FT /db_xref="UniProtKB/TrEMBL:B6EIN0" FT /protein_id="CAQ78673.1" FT /translation="MRVFPEQLVQNLERGLRQNYLLFGNEPLLKQECLDQIRKHSFQQG FT FEEKHQFTLDKQLDWNLIFDCTQALSLFSSRQIIELTVSDTGLTAAHTSKIKELVPMLH FT DDILLIFQGPRVNKSQESTQWFKALTQQGLFIPCNTPDNQQLPRFIQQRCKLLKLKPDA FT EAVQMLAQWHEGNLLALAQSLDKLSLLYPDGLLTLIRIEEALNRNNHFTPFQLMDALLF FT GQAKRAQRILRQLEGESVEVVILLRTIQKEVFLLLSFQQAISQGEAMFTVFDRYKVWQN FT RRSLYQAALQRLSMTQIQALIKSLAQLEVAVKTDFDTNCWPQLSQLSLDICNIHISVTP FT PPSHS" FT misc_feature complement(1090785..1091714) FT /gene="holA" FT /locus_tag="VSAL_I0988" FT /note="HMMPfam hit to PF06144, DNA polymerase III, delta FT subunit, score 1.6e-99" FT /inference="protein motif:HMMPfam:PF06144" FT CDS complement(1091774..1092406) FT /transl_table=11 FT /locus_tag="VSAL_I0989" FT /old_locus_tag="TVS0858" FT /product="rare lipoprotein B precursor" FT /note="Lack of similarity at the N-terminus in comparison FT to other proteins" FT /db_xref="GOA:B6EIN1" FT /db_xref="InterPro:IPR007485" FT /db_xref="UniProtKB/TrEMBL:B6EIN1" FT /protein_id="CAQ78674.1" FT /translation="MREFSVKRLLSLFSIRAVIIIALSIMTSACGFQLRGSYLLPEEVH FT EVSLTSFDQYSNLTRDVQKQLRMNGVKQVAPTTVTPTLNLISETTSERTLSLYQNSRAA FT EIELTYTVQYSVLIPGHDLKTYTTTVNRNYLDNPLTALAKSVERDMIEDEMRTQAAEQI FT LRQMARLKADGELLDDTDIISNKDETETKVTTKEMAQSMATSTDNKK" FT misc_feature complement(1091888..1092319) FT /locus_tag="VSAL_I0989" FT /note="HMMPfam hit to PF04390, Rare lipoprotein B FT family,score 1.3e-60" FT /inference="protein motif:HMMPfam:PF04390" FT misc_feature complement(1092305..1092373) FT /locus_tag="VSAL_I0989" FT sig_peptide complement(1092314..1092406) FT /locus_tag="VSAL_I0989" FT misc_feature complement(1092317..1092349) FT /locus_tag="VSAL_I0989" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1092574..1095150) FT /transl_table=11 FT /gene="leuS" FT /locus_tag="VSAL_I0990" FT /old_locus_tag="TVS0859" FT /product="leucyl-tRNA synthetase" FT /EC_number="6.1.1.4" FT /db_xref="GOA:B6EIN2" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002300" FT /db_xref="InterPro:IPR002302" FT /db_xref="InterPro:IPR009008" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:B6EIN2" FT /protein_id="CAQ78675.1" FT /translation="MQEQYNPQDLEQKIQKHWDDSKTFVVTEDASKEKFYCLSMFPYPS FT GRLHMGHVRNYTIGDVVSRYQRLQGKNVMQPIGWDAFGLPAENAAVKNKTAPAPWTYEN FT IEYMKNQLKLLGFGYDWSREFATCTPEYYRWEQEFFTKLYNKGLVYKKTSSVNWCPNDQ FT TVLANEQVEDGCCWRCDTPVEQKKIPQWFIKITEYAQELLDDLDTLDGWPDMVKTMQRN FT WIGRSEGVELSFAVNGEEAPLEVYTTRPDTLMGVTYVGIAAGHPLAEQAAAKNPELFAF FT TEECRNTKVAEAELATMEKKGMDTGLRAIHPLNGREVPIYVANFVLMDYGTGAVMAVPA FT HDQRDYEFATKYGLDIIPVIKPEDGSDVDVSDVAYTEKGVLFDSGEFDGLAFQDAFDAI FT AAKLEAEGKGKKTVNFRLRDWGVSRQRYWGAPIPMVTTEDGEVHPVPADQLPVILPEDV FT VMDGVTSPIKADKEWAKTTFNGEPALRETDTFDTFMESSWYYARYCSPQADDILDPEKA FT NYWLPVDQYVGGIEHACMHLLYSRFFHKLLRDAGYVTSNEPFKQLLCQGMVLSDAFHHT FT NEKGTKEWIAPTDVTIERDAKGRIEKAVDDQGREVQHSGMIKMSKSKNNGIDPQEMVDK FT FGADTVRLFMMFAAPADMTLEWQESGVEGASRFLKRVWKLVHEHTTKGTTEALDVAALS FT GDQKALRRDVHKTIAKVSDDIGRRQTFNTAIAAIMELMNKLNKAPQGSAQDRALLDEAL FT KAVVVMLYPMTPHASFAMWEALGESNIDTTAWPTFDEKALIEDEKTIVVMINGKLRAKL FT IVAADATEEQVKELGLNDENALKFLDGLTIRKVIYVPGKLLNIVAN" FT misc_feature complement(1092673..1093062) FT /gene="leuS" FT /locus_tag="VSAL_I0990" FT /note="HMMPfam hit to PF08264, Anticodon-binding FT domain,score 6.7e-06" FT /inference="protein motif:HMMPfam:PF08264" FT misc_feature complement(1092979..1093029) FT /gene="leuS" FT /locus_tag="VSAL_I0990" FT /note="PS00216 Sugar transport proteins signature 1." FT /inference="protein motif:ProSite:PS00216" FT misc_feature complement(1093183..1095114) FT /gene="leuS" FT /locus_tag="VSAL_I0990" FT /note="HMMPfam hit to PF00133, tRNA synthetases class I (I, FT L, M and V), score 3.8e-15" FT /inference="protein motif:HMMPfam:PF00133" FT misc_feature complement(1094992..1095027) FT /gene="leuS" FT /locus_tag="VSAL_I0990" FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT /inference="protein motif:ProSite:PS00178" FT CDS 1095318..1095800 FT /transl_table=11 FT /locus_tag="VSAL_I0991" FT /old_locus_tag="TVS0860" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009912" FT /db_xref="UniProtKB/TrEMBL:B6EIN3" FT /protein_id="CAQ78676.1" FT /translation="MSKQKKGYNTIFEHVMNVMERSPEEFQRWAKSSEEVVDAASDMTK FT DEMSLISNYVKRDMKEFAQNYEESKTTFPDSPFYRLIADSIWHGLLEITDKTQLEWREV FT FDDLEHQGVYQAGEVVGLGVLVCEKCGHREQYNHAQIIQSCTHCDNNEFTRLSLKP" FT misc_feature 1095348..1095797 FT /locus_tag="VSAL_I0991" FT /note="HMMPfam hit to PF07295, Protein of unknown function FT (DUF1451), score 6.8e-77" FT /inference="protein motif:HMMPfam:PF07295" FT CDS complement(1095871..1097376) FT /transl_table=11 FT /gene="lnt" FT /locus_tag="VSAL_I0992" FT /old_locus_tag="TVS0861" FT /product="apolipoprotein N-acyltransferase" FT /EC_number="2.3.1.-" FT /db_xref="GOA:B6EIN4" FT /db_xref="InterPro:IPR003010" FT /db_xref="InterPro:IPR004563" FT /db_xref="UniProtKB/TrEMBL:B6EIN4" FT /protein_id="CAQ78677.1" FT /translation="MPFLNHYLSRLLIAVLFGASATLAFAPYSLWPFAFIAPLVLFLLL FT NNQTTKRSTWIGFFWGIGYFGSGINWIHISIDNFGGMPIAASLFLMIGLISYLALYPML FT FAFLATRFFSLHSLHKYLLAFPALWLVTDWLRGWVFTGFPWLWLGYSQIDSPFSAWAPI FT FGVEGITAIIILSVGAITYALLEKKWTLLLVPAILAATSFAIKPFDWVTPQPEKATKVA FT LIQGNVNQALKWLPSERWPTIMKYMDLSRKNWDADLIVWPEAAIPALESEIPSFLRNLD FT SAATMNNSTIITGIVGQSPTGNFYNNIISLGKNGTNGYDYLEQPRYSKHHLLPFGEFVP FT FEALLRPLAPIFNLPMSSFSRGSYIQPNIQASGSHLAPALCYEIVYGEQVRENITEQTD FT YILTLSNDAWFGTSIGPLQHMEMAQMRALETGKPVIRSTNNGVTAITDYRGNIIKQIPQ FT FTTAVLRGEVIPTTGTTPYRYWGTWPLYLLVMLSLLIAWRKQK" FT misc_feature complement(order(1095886..1095942,1096744..1096812, FT 1096831..1096899,1096957..1097016,1097053..1097121, FT 1097149..1097217,1097236..1097289,1097299..1097358)) FT /gene="lnt" FT /locus_tag="VSAL_I0992" FT misc_feature complement(1096159..1096719) FT /gene="lnt" FT /locus_tag="VSAL_I0992" FT /note="HMMPfam hit to PF00795, Carbon-nitrogen FT hydrolase,score 8.8e-39" FT /inference="protein motif:HMMPfam:PF00795" FT sig_peptide complement(1097299..1097376) FT /gene="lnt" FT /locus_tag="VSAL_I0992" FT CDS complement(1097468..1098343) FT /transl_table=11 FT /locus_tag="VSAL_I0993" FT /old_locus_tag="TVS0862" FT /product="hemolysin" FT /db_xref="GOA:B6EIN5" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR005170" FT /db_xref="InterPro:IPR016169" FT /db_xref="UniProtKB/TrEMBL:B6EIN5" FT /protein_id="CAQ78678.1" FT /translation="MNDENSQNTEGPSRKSFLGRLSQLFQGEPKDRQELVDVFRDSEEN FT EVIDHDTRDMLEGVMEISEMRVRDIMLPRSQMVTVEKTQNLESLIATIIEASHSRYPVI FT SEDKDHVEGILLAKDLLRYLGSDCEAFEIEQVIRPAVVVPESKRVDKLLKEFREERYHM FT AIVVDEFGGVSGLVTIEDILEEIVGDIEDEFDDEEEKDIRQLSKHTFAVKALTEIDDFN FT DAFLTNFSDEEIDTVGGLVLTTFGHLPESGETIEISGFTFKVTAADNRRIIQLQVTIPE FT KESDKKHEEE" FT misc_feature complement(1097501..1097737) FT /locus_tag="VSAL_I0993" FT /note="HMMPfam hit to PF03471, Transporter associated FT domain, score 1.4e-25" FT /inference="protein motif:HMMPfam:PF03471" FT misc_feature complement(1097783..1098133) FT /locus_tag="VSAL_I0993" FT /note="HMMPfam hit to PF00571, CBS domain pair, score FT 2e-30" FT /inference="protein motif:HMMPfam:PF00571" FT CDS complement(1098413..1098874) FT /transl_table=11 FT /locus_tag="VSAL_I0994" FT /old_locus_tag="TVS0863" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EIN6" FT /db_xref="InterPro:IPR002036" FT /db_xref="InterPro:IPR020549" FT /db_xref="InterPro:IPR023091" FT /db_xref="UniProtKB/Swiss-Prot:B6EIN6" FT /protein_id="CAQ78679.1" FT /translation="MSIELDLQIACENEKDLPSEKDFMSWLNAVLPQFQPQAELTIRIV FT DEKESHELNHQYRGMDKPTNVLSFPFEAPPEVEIDLLGDLIICRQVVEKEAVEQNKPLL FT AHWAHMVVHGSLHLLGYDHIEDEEAEEMESLETELMQEMGFEDPYLAEK" FT misc_feature complement(1098467..1098742) FT /locus_tag="VSAL_I0994" FT /note="HMMPfam hit to PF02130, Uncharacterized protein FT family UPF0054, score 1.2e-51" FT /inference="protein motif:HMMPfam:PF02130" FT misc_feature complement(1098506..1098538) FT /locus_tag="VSAL_I0994" FT /note="PS01306 Uncharacterized protein family UPF0054 FT signature." FT /inference="protein motif:ProSite:PS01306" FT CDS complement(1098896..1099966) FT /transl_table=11 FT /locus_tag="VSAL_I0995" FT /old_locus_tag="TVS0864" FT /product="PhoH-like protein" FT /db_xref="GOA:B6EIN7" FT /db_xref="InterPro:IPR003714" FT /db_xref="UniProtKB/TrEMBL:B6EIN7" FT /protein_id="CAQ78680.1" FT /translation="MSIKTTKLELTLEPANNKRLSNLCGPFDDNIKHLERRLGVEVNYR FT GNLFTVVGQPHTVSAAVDILRDLYVNTAPIKNQYPDIEPEQIHLAVKESGVLEQPSEAV FT TTLPYGKEIFIKTKKGLIKPRTENQAQYVTNIVTHDITFGIGPAGTGKTYLAVAAAVDA FT LERQEVRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFEMLGFERVEKLIER FT NVIEVAPLAYMRGRTLNDAFIILDESQNTTVEQMKMFLTRIGFNSRAVITGDVTQIDLP FT RGAKSGLRHAVEVLSEVDEISFNFFIADDVVRHPVVARIVNAYEKWETNDQKERKLGEQ FT RRKEERDARLLDSENN" FT misc_feature complement(1098992..1099606) FT /locus_tag="VSAL_I0995" FT /note="HMMPfam hit to PF02562, PhoH-like protein, score FT 4.6e-149" FT /inference="protein motif:HMMPfam:PF02562" FT misc_feature complement(1099508..1099531) FT /locus_tag="VSAL_I0995" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1100110..1101534) FT /transl_table=11 FT /locus_tag="VSAL_I0996" FT /old_locus_tag="TVS0865" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EIN8" FT /db_xref="InterPro:IPR002792" FT /db_xref="InterPro:IPR005839" FT /db_xref="InterPro:IPR006463" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013848" FT /db_xref="InterPro:IPR020612" FT /db_xref="InterPro:IPR023404" FT /db_xref="InterPro:IPR023970" FT /db_xref="UniProtKB/Swiss-Prot:B6EIN8" FT /protein_id="CAQ78681.1" FT /translation="MTKKLLIKTWGCQMNEYDSSKMADLLGAANGYELTEDPKEADVLL FT LNTCSIREKAQEKVFHQLGRWKHLKDKKPDLVIGVGGCVATQEGDHIRQRAPYVDVIFG FT PQTLHRLPQMIKQSLSNEKTVMDISFPEIEKFDNLPEPKADGVSAFVSIMEGCSKYCTY FT CVVPYTRGEEVSRPLDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPMYDGDICSFADLL FT RMVASIDGIDRLRFTTSHPLEFGDDIVAVYEDTPELVSFLHLPVQSGSDRILTMMKRPH FT TAIEYKSIIRKLRKARPDILISSDFIVAFPGESEKDFQDTMKLIKDVDFDMSYSFVFSP FT RPGTPAADYPCDIPEQTKKDRLAELQQQISFQSARFSRQMLNTELRALVEGPSKRNPME FT LRARTENNRVVNFTGSPELIGQFVDLHITESFTNSLRGTLVRTEKDMGLRVAVSPSEMI FT EKTRREDDLGVGTFTP" FT misc_feature complement(1100212..1100403) FT /locus_tag="VSAL_I0996" FT /note="HMMPfam hit to PF01938, TRAM domain, score 1.7e-16" FT /inference="protein motif:HMMPfam:PF01938" FT misc_feature complement(1100560..1101084) FT /locus_tag="VSAL_I0996" FT /note="HMMPfam hit to PF04055, Radical SAM FT superfamily,score 5e-29" FT /inference="protein motif:HMMPfam:PF04055" FT misc_feature complement(1101022..1101084) FT /locus_tag="VSAL_I0996" FT /note="PS01278 Uncharacterized protein family UPF0004 FT signature." FT /inference="protein motif:ProSite:PS01278" FT misc_feature complement(1101223..1101525) FT /locus_tag="VSAL_I0996" FT /note="HMMPfam hit to PF00919, Uncharacterized protein FT family UPF0004, score 8.5e-49" FT /inference="protein motif:HMMPfam:PF00919" FT CDS 1101750..1102907 FT /transl_table=11 FT /gene="ubiF" FT /locus_tag="VSAL_I0997" FT /old_locus_tag="TVS0866" FT /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol FT hydroxylase" FT /EC_number="1.14.13.-" FT /db_xref="GOA:B6EIN9" FT /db_xref="InterPro:IPR002938" FT /db_xref="InterPro:IPR003042" FT /db_xref="InterPro:IPR010971" FT /db_xref="UniProtKB/TrEMBL:B6EIN9" FT /protein_id="CAQ78682.1" FT /translation="MMKEYDFAIVGGGMVGAAAAIGLAKLGYLVAIIEHKEPSTYDNKQ FT PMDIRVSAISQSSVDLLEKLGAWESIKEMRVCPYKRLETWEHPECRTRFHSDALNMDQL FT GFIVENRLIQLGLWQTFSCYDNLNVITPTKITDLEFFSDHNELTLENGDKIKAKWVLGA FT DGANSYVRQKTNIGITAWDYRQHCMLINIETEQPQQDITWQWFTPSGPRSFLPLQGNKG FT SLVWYDSPKRIKQLCAMNSTQLESEIKAYFPKELGEFTVEQYGSFPLTRRHAQKYVDHH FT CVLLGDAAHTINPLAGQGVNLGFKDIKVLLEEVEKKGLNTDRAFKMYESRRKIDNLAMQ FT SSMDLFYTLFSNSLPPVKLLRNIGLKLADSSGKLKTQALKYALGL" FT misc_feature 1101759..1102772 FT /gene="ubiF" FT /locus_tag="VSAL_I0997" FT /note="HMMPfam hit to PF01494, FAD binding domain, score FT 3e-07" FT /inference="protein motif:HMMPfam:PF01494" FT misc_feature 1101768..1101836 FT /gene="ubiF" FT /locus_tag="VSAL_I0997" FT repeat_region order(1103023..1104971,1106411..1106776) FT /note="VSa2" FT repeat_region 1103023..1103046 FT /note="IR of VSa2" FT CDS 1103104..1103418 FT /transl_table=11 FT /locus_tag="VSAL_I0998" FT /old_locus_tag="TVS0867" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78683.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 1103415..1103762 FT /transl_table=11 FT /locus_tag="VSAL_I0999" FT /old_locus_tag="TVSb0007" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78684.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS join(1103834..1104970,1106440..1106760) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1000" FT /old_locus_tag="TVSb0008" FT /product="transposase (pseudogene)" FT /note="CDS is disrupted by the insertion of an IS element FT after codon 379" FT /note="Similar to Shewanella sp. Transposase IS66 FT UniProt:A1RLT8 (500 aa) fasta scores: E()=1.7e-86, 57.6% id FT in 490 aa. CDS is disrupted by the insertion of an IS FT element after codon 379" FT /db_xref="PSEUDO:CAQ78685.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT repeat_region complement(1104970..1106410) FT /note="VSa9" FT CDS complement(1105138..1106331) FT /transl_table=11 FT /locus_tag="VSAL_I1001" FT /old_locus_tag="TVS0871" FT /product="transposase" FT /db_xref="GOA:B6EIP3" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EIP3" FT /protein_id="CAQ78686.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT repeat_region 1106753..1106776 FT /note="IR of VSa2" FT CDS complement(1106777..1107511) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1002" FT /old_locus_tag="TVS0873" FT /product="membrane protein (fragment)" FT /note="Similar to N-terminal part of Vibrio fischeri FT Macrolide-efflux protein UniProt:Q5E486 (622 aa) fasta FT scores: E()=5.7e-67, 83.673% id in 245 aa. CDS is truncated FT by the insertion of the downstream IS element and FT subsequent recombination events. C-terminal part located FT around 95 kb further downstream" FT /inference="similar to sequence:UniProt:Q5E486" FT misc_feature complement(order(1106777..1106836,1106939..1106998, FT 1107011..1107079,1107116..1107184,1107197..1107250, FT 1107287..1107355,1107383..1107451)) FT /locus_tag="VSAL_I1002" FT CDS complement(1107542..1108141) FT /transl_table=11 FT /locus_tag="VSAL_I1003" FT /old_locus_tag="TVS0874" FT /product="putative HTH-type transcriptional regulator" FT /db_xref="GOA:B6EIP4" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR015893" FT /db_xref="UniProtKB/TrEMBL:B6EIP4" FT /protein_id="CAQ78688.1" FT /translation="MARRNDHSHQEIREMALNNVKLYLEEHSHHELSLRKLAKSIGYVP FT STLVNIFGSYNLLLLRSIAQTLDELMQRIALGIENSTTSEEALKAIAYCYYDFAKQHPN FT RWQLIFEHNMNGELLPEWQEDRINQIMTMLESIIRTINPSKSDGDIVVTSRVIWASVHG FT ITQLSVDDLFFSGLPFDGHQLIDNLFDNYINQWKIS" FT misc_feature complement(1107983..1108048) FT /locus_tag="VSAL_I1003" FT /note="Predicted helix-turn-helix motif with score FT 1321.000, SD 3.69 at aa 32-53, sequence FT LSLRKLAKSIGYVPSTLVNIFG" FT CDS 1108316..1109266 FT /transl_table=11 FT /locus_tag="VSAL_I1004" FT /old_locus_tag="TVS0875" FT /product="putative transport protein" FT /note="Possible alternative translational start site after FT codon 17" FT /db_xref="GOA:B6EIP5" FT /db_xref="InterPro:IPR007379" FT /db_xref="UniProtKB/TrEMBL:B6EIP5" FT /protein_id="CAQ78689.1" FT /translation="MQAIIGSNYFNRVKEEIMKRLLSVAALMFVFVFAAPHAEAKKFGG FT GKSFGKSFKTAPAPKQKQQNTNTIGKQDTAKGASSKKGLMGGLLGGLLVGGLLASMFGG FT GGFEGIQFMDIIIMAGVAFVLFKLFRMFMASKAGSINQRQGAAYAGPQASHDEKPSFRD FT NQQYFQGDQAQPQTQTTGGFGSIGSDEVPHNYPPGFDLQGFINGSREHYRILQGAWNHN FT QLETIQEYVSISLYNDLVQERANLEGEQHTDVMFVDAEVVRAEHNASSAQLSLQFSGRY FT RDSVEGLQEDITDVWHLERDLTQPNAPWLIIGIQA" FT sig_peptide 1108316..1108435 FT /locus_tag="VSAL_I1004" FT misc_feature order(1108376..1108429,1108562..1108630,1108649..1108717) FT /locus_tag="VSAL_I1004" FT misc_feature 1108448..1108471 FT /locus_tag="VSAL_I1004" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1108868..1109263 FT /locus_tag="VSAL_I1004" FT /note="HMMPfam hit to PF04280, Tim44-like domain, score FT 1.1e-37" FT /inference="protein motif:HMMPfam:PF04280" FT CDS 1109413..1109643 FT /transl_table=11 FT /locus_tag="VSAL_I1005" FT /old_locus_tag="TVS0876" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR013468" FT /db_xref="InterPro:IPR020948" FT /db_xref="UniProtKB/TrEMBL:B6EIP6" FT /protein_id="CAQ78690.1" FT /translation="MPFNKDIIEEMNLLKQFPLESTQAGLKVHSDAAPEAIEAMKRLFT FT KGLVTQNDGGYLTAHGTEVSEQVQNVIRVLS" FT CDS complement(1109644..1109895) FT /transl_table=11 FT /locus_tag="VSAL_I1006" FT /old_locus_tag="TVS0877" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR005358" FT /db_xref="UniProtKB/TrEMBL:B6EIP7" FT /protein_id="CAQ78691.1" FT /translation="MECRLYCGACCIAPSITSFIPGMPNGKPAGVRCVQLNDENLCKLF FT GQADRPKVCHQFKACPDVCGSTSEQALQTITELESMTL" FT misc_feature complement(1109701..1109895) FT /locus_tag="VSAL_I1006" FT /note="HMMPfam hit to PF03692, Uncharacterised protein FT family (UPF0153), score 9.5e-14" FT /inference="protein motif:HMMPfam:PF03692" FT CDS 1109923..1110495 FT /transl_table=11 FT /locus_tag="VSAL_I1007" FT /old_locus_tag="TVS0878" FT /product="conserved hypothetical protein" FT /note="Possible alternative translational start site after FT codon 44" FT /db_xref="InterPro:IPR005358" FT /db_xref="InterPro:IPR008228" FT /db_xref="UniProtKB/TrEMBL:B6EIP8" FT /protein_id="CAQ78692.1" FT /translation="MRKIPLFIFQVKVSLDSYLVICKPLALLSQDGYKTASSHNECKAM FT TEQFWQQKKLEEMTEQEWESLCDGCGKCCLHKLMDEDTDEVYYTNVACSWLNSKTCSCK FT DYAKRFTSGEECLKLSRENIAEFNWLPVTCAYRLLAEGNPIPEWHPLITGSKSAMHAAG FT ESVRNKVVYAIDVKNWEDHITNHPHRN" FT misc_feature 1110058..1110483 FT /locus_tag="VSAL_I1007" FT /note="HMMPfam hit to PF05779, Bacterial protein of unknown FT function (DUF83, score 8.1e-94" FT /inference="protein motif:HMMPfam:PF05779" FT CDS complement(1110598..1111641) FT /transl_table=11 FT /gene="int" FT /locus_tag="VSAL_I1008" FT /old_locus_tag="TVS0879" FT /product="phage integrase" FT /note="Similar to Bacteriophage 186 Integrase Int FT UniProt:P06723 (336 aa) fasta scores: E()=2.6e-53, 45.190% FT id in 343 aa" FT /db_xref="GOA:B6EIP9" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:B6EIP9" FT /inference="similar to sequence:UniProt:P06723" FT /protein_id="CAQ78693.1" FT /translation="MTVKKLDTDTKKPWLCDIYPQGRNGKRVRKHFATKGEALAYEKFV FT LKEADTTPWAGKKIERRSLLDMIDMWQERHGQSLAHQKYTYRKLKVIALGMGDPIYTRL FT TPKHFLEYRTARLAGQITNLSGKKEPVSFRTCNIEHDLLNAVINELRRMEEWKCENPLQ FT SVRQFKLHESEMEFLTMDEMKLLITDAENYETHDDMHKIIKLCLATGGRFLEVSKLTGS FT QLSKYKVTFTQTKGKKNRTVPISQDLYAEIYKEDSGPLFKIGYSTVYRFISKRVPRLTH FT QAAHVMRHTFASYYMMNGGNIIALQRILGHTDIKQTMRYAHLAPDHLEDVVTKNPLYII FT KNDYKTD" FT misc_feature complement(1110652..1111149) FT /gene="int" FT /locus_tag="VSAL_I1008" FT /note="HMMPfam hit to PF00589, Phage integrase family,score FT 1.3e-24" FT /inference="protein motif:HMMPfam:PF00589" FT misc_feature complement(1110823..1110888) FT /gene="int" FT /locus_tag="VSAL_I1008" FT /note="Predicted helix-turn-helix motif with score 978.000, FT SD 2.52 at aa 252-273, sequence IYKEDSGPLFKIGYSTVYRFIS" FT CDS complement(1111704..1112492) FT /transl_table=11 FT /locus_tag="VSAL_I1009" FT /old_locus_tag="TVS0880" FT /product="probable exclusion protein" FT /note="Similar to Vibrio phage K139 glo glo. UniProt:Q37932 FT (EMBL:AF125163) (137 aa) fasta scores: E()=1.7e-06, 28.814% FT id in 118 aa, and to Vibrio phage K139 glo glo. FT UniProt:Q37932 (EMBL:AF125163) (137 aa) fasta scores: FT E()=1.7e-06, 28.814% id in 118 aa. Lack of similarity at FT the N- and C-terminus in comparison to Vibrio phage K139 FT glo" FT /db_xref="UniProtKB/TrEMBL:B6EIQ0" FT /inference="similar to sequence:UniProt:Q37932" FT /protein_id="CAQ78694.1" FT /translation="MKKALSILSKLSLAIGIFIMPFIFSWFTLKKGTEKKYKILAFGWL FT ILYISLFTIGLMNPKTIETPQPKAEVSLNNCSYSLNVFSDINNLMDQIIKFRDEKASYK FT EIAEWRVAVFNPEFNNLSNKHHLAANIVMSPKHELARSVYTDYLLRMPLFLNDVYSAAR FT TGDYSNIKMQSDIMKTVIPKIRKSCVKEETTVSKPIEENKVTSTQTKSINASQELHIVK FT KSNSGICHDNFSSFYNRTKNYTPYNTIQDCLNSGGRLPKK" FT misc_feature complement(order(1112325..1112378,1112406..1112474)) FT /locus_tag="VSAL_I1009" FT sig_peptide complement(1112403..1112492) FT /locus_tag="VSAL_I1009" FT CDS complement(1112515..1113471) FT /transl_table=11 FT /locus_tag="VSAL_I1010" FT /old_locus_tag="TVS0881" FT /product="probable phage regulatory protein CI" FT /note="Similar to Vibrio phage K139 ci. UniProt:Q9XJF9 FT (EMBL:AF125163) (215 aa) fasta scores: E()=4.1e-21,47.257% FT id in 237 aa, and to Vibrio phage K139 ci. UniProt:Q9XJF9 FT (EMBL:AF125163) (215 aa) fasta scores: E()=4.1e-21, 47.257% FT id in 237 aa. Lack of similarity at the N-terminus in FT comparison to Vibrio phage K139 ci" FT /db_xref="GOA:B6EIQ1" FT /db_xref="InterPro:IPR010744" FT /db_xref="UniProtKB/TrEMBL:B6EIQ1" FT /inference="similar to sequence:UniProt:Q9XJF9" FT /protein_id="CAQ78695.1" FT /translation="MSLDKIENFNYLKGFDFTENLKFVTGTNSFVELAHLLGIAKGNIS FT TWNSRNTTSFESIVRLHLIYGIPVEAMALGKNPKKYKADKPTKPYKYMSGEPFINKIKE FT ITGANTLLDLSEIFDIPNTTFSAWRMANRNSHELTVRLHLAKGVPVKELAFENGVKPEG FT FREWVSSITSGVHQNESDKMEQLGVSDVAYSYNSNVEKLPNPQHQTVIVQSFCLNNGKL FT LDTGEIPYALRMMNSWDLASKNVIEVETNDGRYLVDISQNDAVSGSYLIDTNGRMSINT FT IQRLPNKLLVDFNGATIELSDDDIKVIGRIAVTIIKN" FT misc_feature complement(1112989..1113183) FT /locus_tag="VSAL_I1010" FT /note="HMMPfam hit to PF07022, Bacteriophage CI repressor FT helix-turn-h, score 8.4e-11" FT /inference="protein motif:HMMPfam:PF07022" FT misc_feature complement(1113232..1113426) FT /locus_tag="VSAL_I1010" FT /note="HMMPfam hit to PF07022, Bacteriophage CI repressor FT helix-turn-h, score 8.1e-14" FT /inference="protein motif:HMMPfam:PF07022" FT misc_feature complement(1113325..1113390) FT /locus_tag="VSAL_I1010" FT /note="Predicted helix-turn-helix motif with score FT 1119.000, SD 3.00 at aa 28-49, sequence FT NSFVELAHLLGIAKGNISTWNS" FT CDS 1113644..1113844 FT /transl_table=11 FT /locus_tag="VSAL_I1011" FT /old_locus_tag="TVS0882" FT /product="probable phage regulatory protein" FT /note="Weakly similar to Haemophilus phage HP2 orf2(s)cox FT UniProt:Q775G1 (70 aa) blastp scores: E()=0.020" FT /db_xref="UniProtKB/TrEMBL:B6EIQ2" FT /inference="similar to sequence:UniProt:Q775G1" FT /protein_id="CAQ78696.1" FT /translation="MASIAIVPPAPFWTKKKFSEQTGESMSSIENNIKSGKYPTLPKEA FT GKGLVRINIVKMFENSALQQV" FT misc_feature 1113680..1113745 FT /locus_tag="VSAL_I1011" FT /note="Predicted helix-turn-helix motif with score FT 1168.000, SD 3.17 at aa 13-34, sequence FT WTKKKFSEQTGESMSSIENNIK" FT CDS 1113931..1114473 FT /transl_table=11 FT /gene="cII" FT /locus_tag="VSAL_I1012" FT /old_locus_tag="TVS0883" FT /product="phage regulatory protein CII" FT /db_xref="InterPro:IPR009679" FT /db_xref="UniProtKB/TrEMBL:B6EIQ3" FT /protein_id="CAQ78697.1" FT /translation="MSSNMDMCELRERKQKQYDAVCSDFRLNHNMEELAIITGMKSGTL FT LRNRLNPEQSHKLDPVDLAMLCKASNDYTILNTMFADLGVVTIALPGQQDEKSYFERTL FT LNSKYSGELSSDALDMCNAERLPRSKKRKTLAKAQGALSNLVLLINDLENRTTGLQPIL FT QFGTDFLANGAPLPGLM" FT misc_feature 1113955..1114446 FT /gene="cII" FT /locus_tag="VSAL_I1012" FT /note="HMMPfam hit to PF06892, Phage regulatory protein CII FT (CP76), score 1.8e-66" FT /inference="protein motif:HMMPfam:PF06892" FT CDS 1114483..1114806 FT /transl_table=11 FT /locus_tag="VSAL_I1013" FT /old_locus_tag="TVS0885" FT /product="putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIQ4" FT /protein_id="CAQ78698.1" FT /translation="MSQLAKKQEIQTPTAQESIAEAKSLFTNGGKRKQLKIVFNSFDKQ FT GRGLICIAGGLSPKDCFRSFEDFDDLELQKVRRGMQVLQDITKRVYSKVGDVNKLKPSH FT FTA" FT CDS 1114874..1115356 FT /transl_table=11 FT /locus_tag="VSAL_I1014" FT /old_locus_tag="TVS0886" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIQ5" FT /protein_id="CAQ78699.1" FT /translation="MGAMNMNDLKTAKQFYQASLEHLNKANELHEKMEATERKTVALFS FT RFIDGTKSISGDVELVAKDNLKAIQQRDVLAVINSIVAMTMDSPSSLVVSFNFGTLYDG FT TGTFYVIAWENTEERETKLHEHADLSESNALARCIQIESKFAELIIEAKDNAEVTA" FT CDS 1115353..1115754 FT /transl_table=11 FT /locus_tag="VSAL_I1015" FT /old_locus_tag="TVS0887" FT /product="hypothetical protein, putative phage gene" FT /note="Weakly similar to Vibrio phage K139 orf5. FT UniProt:Q8W764 (EMBL:AF125163) (104 aa) blastp scores: FT E()=5.4" FT /db_xref="UniProtKB/TrEMBL:B6EIQ6" FT /inference="similar to sequence:UniProt:Q8W764" FT /protein_id="CAQ78700.1" FT /translation="MSVISVYQADLEFALRGAGFTSRKINMFLKAFNKETVSQGVICSL FT DSQRAMLVNVNGTEQGLCLSDFITAWWSFWVVVFDTTNNPDLEQQSLGAIRALFFISSS FT CRSVAQQSMMQTWWRDFEPEHGSPMLESI" FT CDS 1115754..1115882 FT /transl_table=11 FT /locus_tag="VSAL_I1016" FT /old_locus_tag="TVS0888" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIQ7" FT /protein_id="CAQ78701.1" FT /translation="MNKDKFLAKMSIAFMQNHGVAPTESQLDGWLEVYAVLESKGE" FT CDS 1115885..1116157 FT /transl_table=11 FT /locus_tag="VSAL_I1017" FT /old_locus_tag="TVS0889" FT /product="hypothetical protein, putative phage gene" FT /note="Weakly similar to Bacteriophage phi1026b gp41. FT UniProt:Q6JIJ0 (EMBL:AY453853) (85 aa) blastp scores: FT E()=0.22" FT /db_xref="UniProtKB/TrEMBL:B6EIQ8" FT /inference="similar to sequence:UniProt:Q6JIJ0" FT /protein_id="CAQ78702.1" FT /translation="MSKSCNCFEETRNKAKEHIRAKLPRDIVDFSVSWKDAAIFFSGDH FT VPVNPSLEVTYRKIKKDKAPAKNLTKDSIGIMCSYCPFCGRKLGE" FT CDS 1116160..1116390 FT /transl_table=11 FT /locus_tag="VSAL_I1018" FT /old_locus_tag="TVS0890" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIQ9" FT /protein_id="CAQ78703.1" FT /translation="MLRFLAVVLNSGGGVVRDAKTDEIQIKELGEYESKELAIDNACVQ FT LQCEHITNGMLVRGNHTGGFMICDTQEFAAL" FT CDS 1116387..1116746 FT /transl_table=11 FT /locus_tag="VSAL_I1019" FT /old_locus_tag="TVS0891" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIR0" FT /protein_id="CAQ78704.1" FT /translation="MNIVDDRVKPRISSVKDVYEQLFSLARLLKNKDSLLPIIGFEHFC FT FTSDTLSSHCCDYFDSLSDPEFCREIIYKVDNIVNPSEPHVSIQIQLMPLAERLLLHKM FT FKINTAGLDISDIPF" FT CDS 1116746..1119259 FT /transl_table=11 FT /locus_tag="VSAL_I1020" FT /old_locus_tag="TVS0892" FT /product="phage replication protein" FT /note="Similar to Bacteriophage 186 Replication gene A FT protein (gpa) UniProt:P41064 (694 aa) fasta scores: FT E()=1e-58, 36.631% id in 647 aa. Lack of similarity at the FT N-terminus in comparison to other proteins. CDS contains FT additional internal amino acids, residues 560 to 625, in FT comparison to Bacteriophage 186" FT /db_xref="GOA:B6EIR1" FT /db_xref="InterPro:IPR008766" FT /db_xref="UniProtKB/TrEMBL:B6EIR1" FT /inference="similar to sequence:UniProt:P41064" FT /protein_id="CAQ78705.1" FT /translation="MAKLTFTPQEQRAATKACLSFGGLCVFPQKPKAIQAPYSQVSFET FT PEPENMTVIERNLYSVDKVDHEWRKQFFADLPSYLSKYFADRYIAIFKKKGRAEANTYL FT RERMGGELQRRVSLVLYRYRQLPTYNKIKLMSEDEDADQCDFDATPKEGQLQFDLEKVE FT IKKPKSRLLAEMELDELKDMAFKISQIMNRRFNLLNKKYAGETDQEINEGLLNIYDELA FT ELTLSFGFAAPCTKKNPKTRIAQDVYGDIFRMLDEKFWLTSLKKARKIMREHLAIAMGQ FT VSKRASAYCSYDCVREHKEQQRKNWEYIQNQILVDDETQEECSMEDMVLKSVSNPAIRR FT HELMTRTRGCENIAEEMELCGLFLTLTAPGKYHNSYQRGGFIEHWNGSSPRDAQVYLNG FT VWSRIRAKLGREEFRWFGIRVAEPHHDGTPHWHLLLWCKPEEKEAITKIFIDYATKEDK FT HELMKKGVFDYSARCDIKAIDSEQGSATGYIAKYISKNIDGYKMDDEVSDETDKPIKDM FT AKNVTAWKSRWCIRQFQFIGGAPVTTYRELRRLANLDKASYMDFLHSQKREELLTVYRD FT MTANDMGPHLPSIMLTKSVIMKRLGDAYKPTIKHENNSVVATMQSADEGNWQGYIMGQG FT GPFVKRAQLMVRNAYEELPFSSRYSETIRKIEGIFAAGEFIKTRVRKWTIQNKPKVVTE FT LEAGALALDGSAAAPWSSVNNCTRDLKESRKGQVSDKLSTLLTPLGKKPESLDEHALNA FT FMKGSTLNLHDGRKVKLRSGYVDMDGNVRQPELIEITKEPENLSWLDFEGWPDAPTDTN FT SNEYQQPDLSIFPDCDFGDDEWPLV" FT misc_feature 1117820..1118389 FT /locus_tag="VSAL_I1020" FT /note="HMMPfam hit to PF05840, Bacteriophage replication FT gene A protein (G, score 7.3e-121" FT /inference="protein motif:HMMPfam:PF05840" FT CDS 1119368..1119751 FT /transl_table=11 FT /locus_tag="VSAL_I1021" FT /old_locus_tag="TVS0893" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIR2" FT /protein_id="CAQ78706.1" FT /translation="MLASGDILAVGDIFSKMGKKGSAGNQQIMPMKPWVQRYLGRLLID FT DEIIDLGFPPSYKDRDFVLFDALNTDDLTEGFAFNKKKNAYFSSEQGYVMAYLDLGDGT FT LLHIRTSGSSSVCKCDCLERVIV" FT CDS 1119972..1120886 FT /transl_table=11 FT /locus_tag="VSAL_I1022" FT /old_locus_tag="TVS0894" FT /product="membrane protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIR3" FT /protein_id="CAQ78707.1" FT /translation="MNNTLSKTFCTLVLLSCAVTSAYLTYLYMNELGAAIGVAVIFSLI FT GITLDLVKTITPTFIPTIAKQNQFVALLLVGLTGVLMVISTIASISAIEKGADNMAVST FT KQNVAITEQIKLKQQQLVNLQQLSNEQLRINHTTKAAETTVMISTVTDELNALYHAQSS FT VKNTSILREYNAIITLVIAVSIEVVSVVMALTLHTLNTLEVSVKSVSNPVNTRDAPPSE FT MQVVQSVLPSVEPLKSVEMQFAASVIEEVKEAILTGAVKPSQRGLKVAFNLPQEQIKII FT LNTLHEQNILEPWNNNGYKVKEA" FT sig_peptide 1119972..1120037 FT /locus_tag="VSAL_I1022" FT misc_feature order(1120005..1120058,1120071..1120139,1120176..1120244, FT 1120494..1120562) FT /locus_tag="VSAL_I1022" FT CDS 1121087..1121341 FT /transl_table=11 FT /locus_tag="VSAL_I1023" FT /old_locus_tag="TVS0895" FT /product="hypothetical protein, putative phage gene" FT /note="Expression may be Fur regulated" FT /db_xref="UniProtKB/TrEMBL:B6EIR4" FT /protein_id="CAQ78708.1" FT /translation="MSVGLLSFEHQNNKENDIVLAALNIIIDGIASSEVSTETKCAANY FT IAGLVMADNKGILDPEKQKAILCIFEMAFEVGSVGVMAN" FT CDS complement(1121338..1121802) FT /transl_table=11 FT /locus_tag="VSAL_I1024" FT /old_locus_tag="TVS0896" FT /product="phage zinc-binding transcriptional activator" FT /note="Similar to Vibrio phage K139 orf13 orf13. FT UniProt:Q8W755 (EMBL:AF125163) (83 aa) fasta scores: FT E()=5.2e-14, 56.098% id in 82 aa" FT /db_xref="InterPro:IPR007684" FT /db_xref="UniProtKB/TrEMBL:B6EIR5" FT /inference="similar to sequence:UniProt:Q8W755" FT /protein_id="CAQ78709.1" FT /translation="MVLSVREVFMRVLCQCGTAAIVSRNNITEAVCELSCSCKDAECGH FT SFITSICYKHTLVHSHIELHNGATMEGNRIRCGCGERAVIKKTNRLSYDCADLYCECKN FT TNCKHQFVMSLYYSHTLSPSAKTTDTLVYSLIKALPPQTRHDLGRQLSMF" FT misc_feature complement(1121440..1121577) FT /locus_tag="VSAL_I1024" FT /note="HMMPfam hit to PF04606, Ogr/Delta-like zinc FT finger,score 0.00031" FT /inference="protein motif:HMMPfam:PF04606" FT CDS complement(1121868..1122902) FT /transl_table=11 FT /locus_tag="VSAL_I1025" FT /old_locus_tag="TVS0897" FT /product="phage portal protein" FT /note="Similar to Vibrio phage K139 orf15 UniProt:Q8W753 FT (348 aa) fasta scores: E()=1.2e-85, 66.372% id in 339 aa" FT /db_xref="InterPro:IPR006430" FT /db_xref="InterPro:IPR006944" FT /db_xref="UniProtKB/TrEMBL:B6EIR6" FT /inference="similar to sequence:UniProt:Q8W753" FT /protein_id="CAQ78710.1" FT /translation="MTEQANTLVTQDKPKDDSVYHIDSSPEAVDASSWMTSYSDLFYNE FT FDDYWEPPISRQGLSDTSRANAYHCSLLRARANYVSARFEGGGGLTRRQLQFYCNNYFT FT FGDVAFLKIRNGFGVPVRLFPLPSMHLRKRKNGDFALLERDGKQRTYKAKDVIFLAQDD FT LQQQVYGLPDYLGSLQSSLLNKDATLFRRRYFKNGAHMGFIFYASDPNLSEEDEKKMKE FT TIASSKGVGNFRSMFVNIPNGKEKGIQLIPVGDIATKDEFERIKNITAQDILVGHRVPA FT GKGGIMPQPGSSFPDPEKVGREYDKDEVIPVCKLIMDEVNNDPEIIHRKHLHLRFNIDI FT EKTA" FT misc_feature complement(1121925..1122788) FT /locus_tag="VSAL_I1025" FT /note="HMMPfam hit to PF04860, Phage portal protein, score FT 4.6e-31" FT /inference="protein motif:HMMPfam:PF04860" FT CDS complement(1122899..1124671) FT /transl_table=11 FT /locus_tag="VSAL_I1026" FT /old_locus_tag="TVS0898" FT /product="terminase, ATPase subunit" FT /note="Similar to Vibrio phage K139 orf16 UniProt:Q8W752 FT (605 aa) fasta scores: E()=3e-143, 66.612% id in 605 aa" FT /db_xref="GOA:B6EIR7" FT /db_xref="InterPro:IPR004921" FT /db_xref="InterPro:IPR010332" FT /db_xref="UniProtKB/TrEMBL:B6EIR7" FT /inference="similar to sequence:UniProt:Q8W752" FT /protein_id="CAQ78711.1" FT /translation="MAYSDEIKEAAKKLYLRGLPPKEIAAHLSLNSDRIIYTWAEKFGW FT ALLLNELSVEEMINRRLAVLIDKDEKSDQQLKEMDKLIDHHVKLLKAMGDAKAKAERML FT SQGSSKDNDSGSSNQGRGSNKKKGKGKNNIEHLTEGDFVDWHESLFEYQHVMRNNIKQR FT IRNILKSRQIGATYYFSGEALEDAILTGDNQIFLSASRAQAEVFRSYIIAIGKEFLDIE FT LTGNPITLSNGAELRFLSTNSKTAQSYHGHVYVDEYFWIPKFDELNKLASAMATHKKWR FT KTYFSTPSSKMHQAYPFWTGDSWKKGKASREKLEFPTFAEFRDGGRLCDDKQWRYVVTI FT EDAANGGCDLFDIDELREEYSVDDFNNLFMCMFVDGSLSVFKFSDLEKGMVDAAHWQDF FT KPKNKQPFEHREVWLGYDPSRTRDNACLVVVAPPAVVVEKFRVLEKHYWKGLNFQYHVS FT EIDKVFKRYKVTYIGVDTTGIGGGVWDLISKKYPREAHAIHYSNENKNRLVMKMIDVVE FT ANRLQFDAEHKDIAMAFMSIKRVPTSSGNAMTFKAERNQTTGHADAFWAISHAIINEPL FT DHSSPTKSTWETAK" FT misc_feature complement(1122950..1124176) FT /locus_tag="VSAL_I1026" FT /note="HMMPfam hit to PF03237, Terminase-like family,score FT 1.1e-164" FT /inference="protein motif:HMMPfam:PF03237" FT misc_feature complement(1124480..1124656) FT /locus_tag="VSAL_I1026" FT /note="HMMPfam hit to PF06056, Putative ATPase subunit of FT terminase (gpP, score 1.2e-18" FT /inference="protein motif:HMMPfam:PF06056" FT CDS 1124840..1125715 FT /transl_table=11 FT /locus_tag="VSAL_I1027" FT /old_locus_tag="TVS0899" FT /product="phage capsid scaffolding protein" FT /note="Similar to Vibrio phage K139 orf17 UniProt:Q8W751 FT (299 aa) fasta scores: E()=4e-41, 49.020% id in 306 aa" FT /db_xref="GOA:B6EIR8" FT /db_xref="InterPro:IPR009228" FT /db_xref="UniProtKB/TrEMBL:B6EIR8" FT /inference="similar to sequence:UniProt:Q8W751" FT /protein_id="CAQ78712.1" FT /translation="MPKISDWKVIATEGPTIDGRKITREWLTQMAESYDQKEYTSLIWP FT EHKRFNGYGDNWGKVVELKAEELDGKMRLFAKLQPNQYLLEANKFGQKLFTSIEPNPDY FT KGEGRCYLEGLAVTDSPASTGVSELHFSRKDGETTKLECSVLEEFNLDECYSRSERFFS FT IVNDFFKSGEHSPEQPQEVEPEDTDVTEEQLKVALKEQFGVMREELKTDLKNELKQEFS FT LEAKPPVTPPETAPEGTTVEQFSAALKEALEPITEKLGGLETKFNSLSKEVPGQEPNGD FT GAAEDTSHYA" FT misc_feature 1124852..1125562 FT /locus_tag="VSAL_I1027" FT /note="HMMPfam hit to PF05929, Phage capsid scaffolding FT protein (GPO), score 1.5e-24" FT /inference="protein motif:HMMPfam:PF05929" FT CDS 1125729..1126739 FT /transl_table=11 FT /locus_tag="VSAL_I1028" FT /old_locus_tag="TVS0900" FT /product="major capsid protein" FT /note="Similar to Vibrio phage K139 orf18 UniProt:Q8W750 FT (341 aa) fasta scores: E()=2e-52, 48.000% id in 300 aa" FT /db_xref="GOA:B6EIR9" FT /db_xref="InterPro:IPR006441" FT /db_xref="UniProtKB/TrEMBL:B6EIR9" FT /inference="similar to sequence:UniProt:Q8W750" FT /protein_id="CAQ78713.1" FT /translation="MQLTQVARALLDEYCAKQCEVFKCPDVSKQFSISGPIETQLKSKL FT MESVDFLKLITVEDVDQKTGQVIEVGTNKLHTGRKKGGRHTTSGSVDGNTYTLVETDSC FT AVASWDLLSVWANSGKPGEFMKRLNENAILNFAQDILRVGFNGTSVAETTNPTTSPNGE FT DINKGWNQLVLDKSPEQIIDVDVYLDPDGKGDYRNLDAMASDLINTKIHPALRNDPSLV FT VLVGADLLSFEQARLYDAATTPTEKKAAQQLPNSIAGRRAMSPPFFPGMRMTVTTLKNL FT HVYTQKNTRHRKSEHAEDRKQHENSYLRYEGYAVGAHEGYAGFNEAKVHFGATPA" FT misc_feature 1125750..1126715 FT /locus_tag="VSAL_I1028" FT /note="HMMPfam hit to PF05125, Phage major capsid FT protein,P2 family, score 2.8e-36" FT /inference="protein motif:HMMPfam:PF05125" FT CDS 1126756..1127472 FT /transl_table=11 FT /locus_tag="VSAL_I1029" FT /old_locus_tag="TVS0901" FT /product="phage terminase, endonuclease subunit" FT /note="Similar to Vibrio phage K139 orf19 UniProt:Q8W749 FT (238 aa) fasta scores: E()=2.7e-49, 51.464% id in 239 aa" FT /db_xref="GOA:B6EIS0" FT /db_xref="InterPro:IPR010270" FT /db_xref="UniProtKB/TrEMBL:B6EIS0" FT /inference="similar to sequence:UniProt:Q8W749" FT /protein_id="CAQ78714.1" FT /translation="MRLSPGMRDNLAKRANKELNAVTVSSMADTNSLHIKLIDFEEDRK FT HLRSFNAIADRVEHKRSVLVPKYKPYVQAYLESGDQFENPIFTNLVIWLFDIKELDTAI FT DWCMKAIERDLPTPENFRRDWPTFCADEVLAWAERESERGHSIQPYFSQIFEKVHTEWR FT LHEKVQAKWYKFAGLSLIRNEDGNPQATAIGNVETLEKALALLQLAHEKHRHAGVGTQV FT KKIEQRIRAIKDGKNL" FT misc_feature 1126861..1127259 FT /locus_tag="VSAL_I1029" FT /note="HMMPfam hit to PF05944, Phage small terminase FT subunit, score 1.5e-16" FT /inference="protein motif:HMMPfam:PF05944" FT CDS 1127601..1127942 FT /transl_table=11 FT /locus_tag="VSAL_I1030" FT /old_locus_tag="TVS0902" FT /product="membrane protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIS1" FT /protein_id="CAQ78715.1" FT /translation="MFNIFMSLCILGGIYGVGFFNVDSGFLNLSIAWVWMLGALGVLST FT SPSVIKIHSKKFKPRLRQSVSRVLGWMIFTSLVFFGHWFSALMALIYVLGISYLHSQLR FT KIHKEESNV" FT misc_feature order(1127604..1127663,1127691..1127759,1127820..1127888) FT /locus_tag="VSAL_I1030" FT CDS 1127935..1128399 FT /transl_table=11 FT /locus_tag="VSAL_I1031" FT /old_locus_tag="TVS0903" FT /product="probable head completion/stabilization protein" FT /note="Similar to Vibrio phage K139 orf20 UniProt:Q8W748 FT (153 aa) fasta scores: E()=2.5e-26, 51.299% id in 154 aa" FT /db_xref="GOA:B6EIS2" FT /db_xref="InterPro:IPR009225" FT /db_xref="UniProtKB/TrEMBL:B6EIS2" FT /inference="similar to sequence:UniProt:Q8W748" FT /protein_id="CAQ78716.1" FT /translation="MFSGSSGADYQDTVIENDGFWPNLNAGDFEKRRSIPTDMDSETVA FT YALAAAIAQINIALINKKTAYEAEGITSASDVPGQPMIDNKNLLVILYEKSVFARAKAD FT LIPEFAMVQTKDAGDRVAENETLITERLLAESQQHIRAIFGKSRVGVELL" FT misc_feature 1127974..1128396 FT /locus_tag="VSAL_I1031" FT /note="HMMPfam hit to PF05926, Phage head completion FT protein (GPL), score 5.5e-35" FT /inference="protein motif:HMMPfam:PF05926" FT CDS 1128396..1128920 FT /transl_table=11 FT /locus_tag="VSAL_I1032" FT /old_locus_tag="TVS0904" FT /product="hypothetical protein, putative phage gene" FT /note="Similar to Vibrio phage K139 orf21 UniProt:Q8W747 FT (162 aa) fasta scores: E()=1.2e-15, 33.974% id in 156 aa" FT /db_xref="InterPro:IPR009678" FT /db_xref="UniProtKB/TrEMBL:B6EIS3" FT /inference="similar to sequence:UniProt:Q8W747" FT /protein_id="CAQ78717.1" FT /translation="MSEIQSQPQAGFMLQGLNQHLSNTTPERLHKHFECWMEDVELTLQ FT PKNQGQGFDIGYMQYTAVFSFEKFPFKKVNPATVMVNVLAWLDDNDEFREKFNLAEPSF FT DVEPENDDTVIMTLEVELIEPLMVIEDPDGEIVWRGKRWINAPYEIWEAEHISVINANN FT PPSPVITDDQN" FT CDS join(1128907..1129281,1129283..1129618) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1033" FT /old_locus_tag="TVS0905" FT /product="putative tail completion protein" FT /note="Similar to Pseudomonas syringae pv. phaseolicola FT Prophage pspph06, virion morphogenesis protein FT UniProt:Q48C42 (222 aa) fasta scores: E()=7.8e-11, 42.609% FT id in 115 aa. CDS contains a frameshift after codon 125. FT The sequence has been checked and is believed to be FT correct" FT /db_xref="PSEUDO:CAQ78718.1" FT /inference="similar to sequence:UniProt:Q48C42" FT CDS 1129637..1130749 FT /transl_table=11 FT /locus_tag="VSAL_I1034" FT /old_locus_tag="TVS0907" FT /product="putative tail sheat protein" FT /note="Similar to Haemophilus phage HP2 orf23 FT UniProt:Q94MY9 (376 aa) fasta scores: E()=9.3e-68, 50.667% FT id in 375 aa" FT /db_xref="InterPro:IPR019694" FT /db_xref="UniProtKB/TrEMBL:B6EIS5" FT /inference="similar to sequence:UniProt:Q94MY9" FT /protein_id="CAQ78719.1" FT /translation="MAWPIVQINTLNLMQGPVNEVERHFLYVGLGTKNAGSLLSVNTQS FT DFSALLDDGSELKANVEAAMLNAGQNWTAGVYVLTAPENWVEAVKTAQQTQSFEAVVLT FT APTTDKATVTAAQALYHELIAKYGRWTFMMLATPGIDKKTQTWSEYEAATVAIQDTIAA FT DGVMLVPQIFPDAIGKLAGRLCNRAASIADTPMRIKTGPLVGDVTLPVDSAGAELTTAT FT LQTLESNRFSVPAWFPDYDGIFWADGRLLDAEGGDYQVIEYRRIIDKVARRIRLIAISD FT IGDRSFNSTPASTARAQNRYCRPLREMAKSATVGEMVFPGEIETPSSDDITIMWENKNS FT VGIYMAAQPKDCPKKITANLMLDLSNPGDK" FT CDS 1130749..1131204 FT /transl_table=11 FT /locus_tag="VSAL_I1035" FT /old_locus_tag="TVS0908" FT /product="probable tail tube protein" FT /note="Similar to Vibrio phage K139 orf25 orf25. FT UniProt:Q8W743 (EMBL:AF125163) (152 aa) fasta scores: FT E()=8.2e-27, 55.782% id in 147 aa" FT /db_xref="InterPro:IPR019708" FT /db_xref="UniProtKB/TrEMBL:B6EIS6" FT /inference="similar to sequence:UniProt:Q8W743" FT /protein_id="CAQ78720.1" FT /translation="MSKRISGLSFDVDIHGVLIHVEKATVTISDESAAASTRGVPDGFT FT DGAVSAEGDYELDTKNFNLLGEAAAKAGSWRAIKPHDCLFYANTGSEEFKAEVFGVKLM FT IDSLLDIDPSSSDKSKHKIKFVVTSPDFIHINGTPYLSSEDTRDLIG" FT CDS 1131216..1131431 FT /transl_table=11 FT /locus_tag="VSAL_I1036" FT /old_locus_tag="TVS0909" FT /product="probable rRNA transcription initiatior FT protein,putative phage gene" FT /note="Similar to Vibrio phage K139 orf26 orf26. FT UniProt:Q8W742 (EMBL:AF125163) (69 aa) fasta scores: FT E()=5.9e-09, 50.794% id in 63 aa" FT /db_xref="GOA:B6EIS7" FT /db_xref="InterPro:IPR000962" FT /db_xref="InterPro:IPR012783" FT /db_xref="UniProtKB/TrEMBL:B6EIS7" FT /inference="similar to sequence:UniProt:Q8W742" FT /protein_id="CAQ78721.1" FT /translation="MDAFDRASALEAKQTEVALANHMAKQKNKVEIKSAEECIECEKAI FT PKARQEAVKGCQYCVNCQELADKGKL" FT misc_feature 1131219..1131425 FT /locus_tag="VSAL_I1036" FT /note="HMMPfam hit to PF01258, Prokaryotic dksA/traR FT C4-type zinc finge, score 2.4e-06" FT /inference="protein motif:HMMPfam:PF01258" FT CDS 1131428..1131850 FT /transl_table=11 FT /locus_tag="VSAL_I1037" FT /old_locus_tag="TVS0910" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIS8" FT /protein_id="CAQ78722.1" FT /translation="MKYYTLKRRYFDFGTYSYLFRQDGSKVCCFVEPVWANNQPFKSCV FT PEGDYDLVPHTSEKYGECYALESEFLGVTVYGPSIRDACLWHIANKPSQLVGCGAPGVD FT FGFLSGEWSVKSSGVAFKALMKELGGKPARLTIMKD" FT CDS 1131853..1132098 FT /transl_table=11 FT /locus_tag="VSAL_I1038" FT /old_locus_tag="TVS0911" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIS9" FT /protein_id="CAQ78723.1" FT /translation="MNFLIGIFGKSLLDIAKGIFLQITWKVIVERFATRIVVWGLEKLK FT SLTTNDVMQDTVDDVLQSLQGKRLKEVPIISAKQKE" FT CDS 1132101..1132340 FT /transl_table=11 FT /locus_tag="VSAL_I1039" FT /old_locus_tag="TVS0912" FT /product="probable exported protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIT0" FT /protein_id="CAQ78724.1" FT /translation="MDATWTNALIGALSLLTFLLGALITKFFSVTKELADFKTHVAETY FT ATKDEVKDAIERVERQIEIGFNRIYETLNKRDAA" FT sig_peptide 1132101..1132196 FT /locus_tag="VSAL_I1039" FT misc_feature 1132119..1132187 FT /locus_tag="VSAL_I1039" FT CDS 1132337..1132600 FT /transl_table=11 FT /locus_tag="VSAL_I1040" FT /old_locus_tag="TVS0913" FT /product="hypothetical protein, putative phage gene" FT /product="orf30" FT /note="Similar to Haemophilus phage HP2 orf26. FT UniProt:Q775G2 (EMBL:AY027935) (102 aa) fasta scores: FT E()=4e-05, 32.927% id in 82 aa overlap; query 5-86; subject FT 21-102" FT /db_xref="InterPro:IPR024406" FT /db_xref="UniProtKB/TrEMBL:B6EIT1" FT /inference="similar to sequence:UniProt:Q775G2" FT /protein_id="CAQ78725.1" FT /translation="MTTPIIITAAGKDLRFTPDLPTYNKYINEMMPHDKVSPATNYLRR FT IVHKDDKAHLDEMLKIPSALMRILAKVNDAFEGDLEIEVKNS" FT CDS 1132788..1134902 FT /transl_table=11 FT /locus_tag="VSAL_I1041" FT /old_locus_tag="TVS0914" FT /product="probable tail length determinator" FT /note="Similar to Vibrio phage K139 orf31 orf31. FT UniProt:Q8W737 (EMBL:AF125163) (605 aa) fasta scores: FT E()=3.2e-101, 55.500% id in 600 aa" FT /db_xref="InterPro:IPR010090" FT /db_xref="UniProtKB/TrEMBL:B6EIT2" FT /inference="similar to sequence:UniProt:Q8W737" FT /protein_id="CAQ78726.1" FT /translation="MSAHLDKLMMQVALIDSVTKPLKGIQNTVTETADVGRSGWEKMAG FT GTAGVIAAGFAVQQALMPAIEMDRVLGEVKSLGVVDEDLQQLQKTALAFSVEYGKSAQE FT VVGAAYDIKSAFGDITGPELSDITKSSAVLAAATKADTATITDYMGTMYGVFKNQANDM FT GVGIWSKNVAGMTAQSVEMFKTTGKGMSDAFTSVGANATAAGIKMNEQMAILGTLQSTM FT SGSEAGTKYKSFLTGVGGAQDKLNMKFVDSQGAMLPMVDILNKLKGQFGDTLDVAESDA FT LKKAFGSDEAVSMIKLLMADTNGLASSINSLGNVKGMSKAENMAGAMTDQWQRLEAAWF FT AIRAGAFGLILPSINAIAGSMADGFNVLLGWTQELPVLTQYLGYFALTIVAGAGLIAAW FT NMVVGLASLMSAGWSSATLLLTTVMKGFNLVMRMARFAALGFAMAAAVAQVPLLPLILG FT IGAVVAAVGAVIYFWDDLKAAWSDFSFIESLGSMVDWLIEKINLIPGINIGGESSGIPQ FT MDTLELSTATPTHYASKAAVPDYSYGYQAPVTQEVAVTPNVTEPVIPKVSEQSVNYGSQ FT YSGLNTVPSYQGNVYYQNQIPVQPESSDLIIGSVVAQPEVPEVNGIVTYDGAIPPLTDT FT DKSKEMSAPISAYIGGNAEGKANVSQQLKQMSAGSTDNSRTQHVGDVYITQEQAFTPED FT LSAWNEMSTP" FT misc_feature order(1133826..1133894,1133928..1133996,1134009..1134077, FT 1134138..1134206) FT /locus_tag="VSAL_I1041" FT CDS 1134899..1135225 FT /transl_table=11 FT /locus_tag="VSAL_I1042" FT /old_locus_tag="TVS0915" FT /product="hypothetical protein, putative phage gene" FT /note="Similar to Vibrio phage K139 orf32 orf32. FT UniProt:Q8W736 (EMBL:AF125163) (110 aa) fasta scores: FT E()=5.3e-13, 54.167% id in 96 aa" FT /db_xref="InterPro:IPR019697" FT /db_xref="UniProtKB/TrEMBL:B6EIT3" FT /inference="similar to sequence:UniProt:Q8W736" FT /protein_id="CAQ78727.1" FT /translation="MSQQYIDYLVTDGGLDFDAGQQPIETSDRNSIAQDVKHAILESGL FT LREYQAERNRTLRADVLTRIEMLIETDKRIEPGTAEIEEQTAEQLWMFAETVDNDNIEM FT GMPL" FT CDS 1135222..1136406 FT /transl_table=11 FT /locus_tag="VSAL_I1043" FT /old_locus_tag="TVS0916" FT /product="hypothetical protein, putative phage gene" FT /note="Similar to Vibrio phage K139 orf33 orf33. FT UniProt:Q8W735 (EMBL:AF125163) (399 aa) fasta scores: FT E()=1e-75, 51.139% id in 395 aa" FT /db_xref="InterPro:IPR006949" FT /db_xref="UniProtKB/TrEMBL:B6EIT4" FT /inference="similar to sequence:UniProt:Q8W735" FT /protein_id="CAQ78728.1" FT /translation="MSTRPLVDFKQIIADEGIPTTEEAIAIELEKEVVAAGSKVSNDSR FT MSPFWRLVKAIVITPTLWLIEQLLASHVLPNTFAATASKGYLDLKAWDVDLERKMATKT FT RGVVEFFKEVAENPIVILKGTIIETSRIEDKIYRLIVVEDVLIQANQASGFVLCEAQEA FT GAGYNLPAGYYSILPVGVSGITHAVNQADWITTPGANTEEDDELALRIRNQFSVVGRYH FT IDAIYRSMLASVAGVRSDQIYFLHDAPRGPGTANAYILLDVGETPSHLLEQLNNFVMFE FT GNHGHGDDILCLALPETQHSVSVTIWPRVNTSEERVAALKVEIENMIRAAFRESDSYSV FT VTRTYPSSMFSFSQLTTEIHTELAEDLLSLEFSNSDIVSELNIPRLSNVAVMNG" FT CDS 1136399..1136989 FT /transl_table=11 FT /locus_tag="VSAL_I1044" FT /old_locus_tag="TVS0917" FT /product="hypothetical protein, putative phage gene" FT /note="Similar to Vibrio phage K139 orf34 orf34. FT UniProt:Q8W734 (EMBL:AF125163) (219 aa) fasta scores: FT E()=1.3e-35, 50.000% id in 184 aa" FT /db_xref="InterPro:IPR006521" FT /db_xref="UniProtKB/TrEMBL:B6EIT5" FT /inference="similar to sequence:UniProt:Q8W734" FT /protein_id="CAQ78729.1" FT /translation="MDKTTNHENDAPELPTENVPWWMDGKTIAETLKEPHFLAKGVMQY FT WQRLKGWLLYPLAQLDPMICNERLLSLLAWDRDITRFKDEPTSLFRKRVKYAFVNAKDA FT GEKAGFIRIFQRLGVGMVEVDERTPDRDWDIITIRLSDSQLSENYSLLEQLLQQYGRTC FT RRYEYQVISLIPLEMSASPMDWQHQYTVVTLEE" FT CDS 1136992..1139064 FT /transl_table=11 FT /locus_tag="VSAL_I1045" FT /old_locus_tag="TVS0918" FT /product="tail fiber protein" FT /note="Similar to Bacteriophage HP1 probable tail fiber FT protein (orf31). UniProt:P51735 (EMBL:BH24159) (925 aa) FT fasta scores: E()=2.2e-35, 28.483% id in 646 aa" FT /db_xref="InterPro:IPR005068" FT /db_xref="InterPro:IPR022225" FT /db_xref="UniProtKB/TrEMBL:B6EIT6" FT /inference="similar to sequence:UniProt:P51735" FT /protein_id="CAQ78730.1" FT /translation="MSQSIITLAFETYKAQQEAIAAPIELNEFVLAFVPNQDPTQPIDR FT NEELPPQHQIVHVANVTQGGFVNPNAVVYSLIMDTRIGDFEFNWVGLRNKQSGVLASIL FT HIPTISKFKSVPGVQNGNSVTRSILMSYQDAKNATGITVDASTWQIDFTARLFGMDEAE FT RLVNLDVFGQAAFLADGFKVKKSGSTYLASIGRGYVGGLRCHLDNEVAISGGSNSSAIY FT LDASWQGLLTSQWQTVFEMKVSKSALSDYVDADGYQHYVTKIADINSAGNVVDTRHVEG FT FSEHLRHDEQATKAQAEAMTSSINWISPLRWKEAFLSRLSNSFAGTRTEYAASEKALSD FT GLRTKANSSHKHDASDVNSGILAKERLPNASTAVKGAVQLNDTVTSTSTTQALTANKGK FT SIWDRANEALNAAHAKWTYVVASTTVYGATKLSSATNSTSEALAATSGALKKTYDLAAS FT KITKVQGDLWYWKRGETVTNSTQLNGKTNSTAATGGTIAERDSSGDISTRLFRSSYQDE FT SVPSGGLAFRKSTSDNSIRFCNNIAAIRTWLSVYSRAEGDSRYVAQSRVSSSTTSTSTT FT NVANSAAAKAAMDRANAAYNKADTSGNKVYTGDNPNNINFPIGHFITAWVSSYYGRDKL FT NHSVKCYLNNNGSIGIYGTDWYGHAKGAYLNGTWGYRGYTGSPGNVNAGLMQRVL" FT misc_feature 1137685..1137750 FT /locus_tag="VSAL_I1045" FT /note="Predicted helix-turn-helix motif with score 980.000, FT SD 2.52 at aa 232-253, sequence TSQWQTVFEMKVSKSALSDYVD" FT misc_feature 1138102..1138233 FT /locus_tag="VSAL_I1045" FT /note="HMMPfam hit to PF03406, Phage tail fibre FT repeat,score 0.0011" FT /inference="protein motif:HMMPfam:PF03406" FT misc_feature 1138255..1138386 FT /locus_tag="VSAL_I1045" FT /note="HMMPfam hit to PF03406, Phage tail fibre FT repeat,score 1.6e-09" FT /inference="protein motif:HMMPfam:PF03406" FT misc_feature 1138660..1138791 FT /locus_tag="VSAL_I1045" FT /note="HMMPfam hit to PF03406, Phage tail fibre FT repeat,score 0.16" FT /inference="protein motif:HMMPfam:PF03406" FT CDS 1139064..1139507 FT /transl_table=11 FT /locus_tag="VSAL_I1046" FT /old_locus_tag="TVS0919" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIT7" FT /protein_id="CAQ78731.1" FT /translation="MEITLISATNLSFANEDKTAIFMTVEVDGVVEITEPVEFVASAFD FT SMAHGVEFYKRARLGEFGTVKPYEPYVPTEVNLLEEARMLFETEKPVALRIEEDYRLEF FT ADISDEQMREVKDYIRAIKPDAVTRSIPVRPEIMNQYEKLSGI" FT CDS 1139507..1140400 FT /transl_table=11 FT /locus_tag="VSAL_I1047" FT /old_locus_tag="TVS0920" FT /product="hypothetical protein, putative phage gene" FT /note="Similar to Vibrio phage K139 orf37. UniProt:Q8W731 FT (EMBL:AF125163) (297 aa) fasta scores: E()=1e-41, 41.497% FT id in 294 aa" FT /db_xref="UniProtKB/TrEMBL:B6EIT8" FT /inference="similar to sequence:UniProt:Q8W731" FT /protein_id="CAQ78732.1" FT /translation="MTWQTASHQWPDSTQAIQTQSETVLKQVAGKMDESANRVETLASK FT VALARHPLSTEAESLLHLRAELESLMCKGQILCVHPYQYQVGNQVESGQHLSPDTAIET FT LRAKLFDVNDKHKPTGQLYALGWMIAENSLANFAQATKALFDVVNIPELGMVARRTGKE FT QSLQTDKFTKHNAIIQPRFKPTAHINQQPIRSALNWQGSQLAQLESLAADKNTPAQKLA FT ALAQKRTQQLEEWTASLNQLKYRNISVLKFEAQGTTEVIATMLKESQAPSHANSYTFSA FT LFLSTEPLTFLTELFA" FT CDS 1140397..1140945 FT /transl_table=11 FT /locus_tag="VSAL_I1048" FT /old_locus_tag="TVS0921" FT /product="hypothetical protein, putative phage gene" FT /note="Similar to Yersinia pseudotuberculosis hypothetical FT protein. UniProt:Q666T6 (EMBL:BX936398) (184 aa) fasta FT scores: E()=1.4e-14, 38.926% id in 149 aa" FT /note="CDS is extended at the C-terminus in comparison to FT orthologues" FT /db_xref="UniProtKB/TrEMBL:B6EIT9" FT /inference="similar to sequence:UniProt:Q666T6" FT /protein_id="CAQ78733.1" FT /translation="MTQLALDAEIIPLKSPRINLSLELKAEDMSGQTSGTDASEQGDKG FT MVLSVSGLIPFKESKTLKRLMVLSRQKEDGKRKIYRIGNELAKSMTIRQVRFMGRVTAD FT EQENLMAWKVSFQLREHLSVSEVKEQRENEKEKQVQTDSTENTAAVKPKAHAAVSNTTD FT QSQPTRFEDALLQKERQLA" FT CDS 1140942..1142567 FT /transl_table=11 FT /locus_tag="VSAL_I1049" FT /old_locus_tag="TVS0922" FT /product="hypothetical protein, putative phage gene" FT /note="Similar to Vibrio phage K139 orf39 orf39. FT UniProt:Q8W729 (EMBL:AF125163) (543 aa) fasta scores: FT E()=2.6e-82, 47.162% id in 458 aa" FT /db_xref="UniProtKB/TrEMBL:B6EIU0" FT /inference="similar to sequence:UniProt:Q8W729" FT /protein_id="CAQ78734.1" FT /translation="MKLNKRIFINGEQRKLVSEQVILELSAGGRATFVIEGEVKESQLV FT ELQIGYQDDYKAYFDGFITKAQPAQNGFTRFIARERSGLLAARWPISIQHPTVSEVIEQ FT LSFETGLKFVLPEQDYIYNRIPNFTSQGTGYQLLNNLGRAFSIPDFCWYQQTDSTIYLG FT SFADSRWQSRPVPLETELSKKQRGGESMTLAVIPSVRPGAIINQKRITEVHFEKDEMTL FT YWKTESAEKRKMNYLFPELAAGHHLPRFARVEAVTDQSIAGHENNPYRPRYAVDVQLLT FT EHGEVDSLVPIYKAVPLPTVIGGAEQGQFATPSEGTIVEIAFAYGRSDKPFIRTILGDG FT WSLPELEPDEQLQQQRHEVFNKTDGAGNTTNSTDQIKHTQAFEHLHEVDKYLGDFGVHE FT LNVQQHSKETIAGQKLIETLGAFEVMAGDDVTLGSLSNLHLVNGGNQTQIIGQLRDIVI FT GLNDKLSVLGERIHTIEKGDTLIVNGKQTITISKDQIINAMNITQDAKTIKLNGGAGVI FT TCESICPFTGKSHVDGSTTVFAGK" FT CDS 1142569..1142766 FT /transl_table=11 FT /locus_tag="VSAL_I1050" FT /old_locus_tag="TVS0923" FT /product="hypothetical protein, putative phage gene" FT /db_xref="UniProtKB/TrEMBL:B6EIU1" FT /protein_id="CAQ78735.1" FT /translation="MALDKGSLKAKIVKEMQGKGMVTEGEFAKAADLAEAIANAVVDEM FT TANAMVIVDAGSSAGSYKVS" FT repeat_region 1143005..1144009 FT /note="VSa6" FT repeat_region 1143005..1143023 FT /note="IR of VSa6" FT CDS 1143101..1143982 FT /transl_table=11 FT /locus_tag="VSAL_I1051" FT /old_locus_tag="TVS0924" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ78736.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 1143428..1143922 FT /locus_tag="VSAL_I1051" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 1143991..1144009 FT /note="IR of VSa6" FT CDS 1144549..1144848 FT /transl_table=11 FT /locus_tag="VSAL_I1052" FT /old_locus_tag="TVS0926" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EIU3" FT /protein_id="CAQ78737.1" FT /translation="MSDKPKTQKPDRKTAMLNIIELVKADFPFDAPEAQICGDTCVGCP FT RKLIELVEGELLYWESYVERGETPNFSEIESFAKLCKNVRRGLVRNGILEPLPR" FT CDS 1145099..1145938 FT /transl_table=11 FT /locus_tag="VSAL_I1053" FT /old_locus_tag="TVS0927" FT /product="putative 2OG-Fe(II) oxygenase" FT /db_xref="GOA:B6EIU4" FT /db_xref="InterPro:IPR005123" FT /db_xref="UniProtKB/TrEMBL:B6EIU4" FT /protein_id="CAQ78738.1" FT /translation="MKLEAIDYTAENAAELFVKSLRETGFGVLKNHPIQQDLVQSIYDN FT WYSFFNSEEKENFQFNVDTQDGFFPASVSEVAKGHTKKDIKEYFHYYPTGQCPAELKAQ FT IQEYYDNANTLASELLSWVEAHSPSDVSELFSQSLSSMVEQSDKTLLRILHYPPLEGDE FT ELGAIRAGAHEDINLLTILPAANEPGLQVKTKENEWLDVPCDFGNLIINIGDMLQEASE FT GYYPSTTHRVVNPEGADKTKSRISLPLFLHPKPDVVLSERHTANSYLMERLRELGVI" FT misc_feature 1145537..1145857 FT /locus_tag="VSAL_I1053" FT /note="HMMPfam hit to PF03171, 2OG-Fe(II) oxygenase FT superfamily, score 2.1e-20" FT /inference="protein motif:HMMPfam:PF03171" FT CDS 1146101..1146595 FT /transl_table=11 FT /locus_tag="VSAL_I1054" FT /old_locus_tag="TVS0928" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6EIU5" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6EIU5" FT /protein_id="CAQ78739.1" FT /translation="MEYRIVKITPEHDNDICYIIKNVGVEFGAVGEGFGPSDDEVLEMS FT KHYHEKNRSRYLILLLNGRVVGGCGIAPFDSSETTCELRKLFLLPEARGRGFGKTMADK FT ILNFAKEAGFTQCYLDTLSSMKSAVKLYENLGFEHLPKPIDGTLHNGCDVWMLKSLVKE FT R" FT misc_feature 1146269..1146514 FT /locus_tag="VSAL_I1054" FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 4.3e-18" FT /inference="protein motif:HMMPfam:PF00583" FT CDS 1146709..1147524 FT /transl_table=11 FT /locus_tag="VSAL_I1055" FT /old_locus_tag="TVS0929" FT /product="phosphorylase" FT /db_xref="GOA:B6EIU6" FT /db_xref="InterPro:IPR000845" FT /db_xref="InterPro:IPR010049" FT /db_xref="InterPro:IPR018017" FT /db_xref="UniProtKB/TrEMBL:B6EIU6" FT /protein_id="CAQ78740.1" FT /translation="MKGFRCCFIALTMMFSFSASAMPQPILLQGAMDIEVEYMVAQLEN FT KKEETIGSWTFWEGTIDGYPVVVSRTEVGIANASASTVLGIEKFSPSMIVNQGTSGGHD FT PELYRGDIVLAVKSFNMGANRSEFSEASAGIQPEKWKNFTVTMRLREDNKLVEHDAFYS FT EPTLVDFAFENVSHPGKGKVVKGVIGTADEWNREVARINWLHKTYQTSAEEMESSSAAL FT VAKAYNIPFIGIRILSNTDLHNQDFDPETATVNQKYVIDFVKKWVASQK" FT sig_peptide 1146709..1146771 FT /locus_tag="VSAL_I1055" FT misc_feature 1146781..1147509 FT /locus_tag="VSAL_I1055" FT /note="HMMPfam hit to PF01048, Phosphorylase family, score FT 4.7e-09" FT /inference="protein motif:HMMPfam:PF01048" FT tRNA complement(1147580..1147667) FT /locus_tag="VSAL_I3157t" FT /product="transfer RNA-Ser" FT CDS complement(1147951..1148658) FT /transl_table=11 FT /gene="cah" FT /locus_tag="VSAL_I1056" FT /old_locus_tag="TVS0930" FT /product="carbonic anhydrase precursor" FT /EC_number="4.2.1.1" FT /db_xref="GOA:B6EIU7" FT /db_xref="InterPro:IPR001148" FT /db_xref="InterPro:IPR018338" FT /db_xref="InterPro:IPR023561" FT /db_xref="UniProtKB/TrEMBL:B6EIU7" FT /protein_id="CAQ78741.1" FT /translation="MKKIITTLAALTVLSTSYTVSASEWSYSGETAPTNWHGTCQSGVN FT QSPIDITHAIESTLDPIIFNYSKAGKNVVNNGHTVQVNFDAKQSIQIEGKTFTLLQLHF FT HAPSENLIEGHSFPLEMHLVHADKDGNLAVIGVMLKEGKPNSELTKIWAKMPQSGQVDL FT ENQLDLTKLLPRDQAYYRFNGSLTTPPCSEGVTWLVMKNPIEISSEQLAQFTALYNGNN FT CPTQAINARPILK" FT sig_peptide complement(1148587..1148658) FT /gene="cah" FT /locus_tag="VSAL_I1056" FT tRNA complement(1148968..1149041) FT /locus_tag="VSAL_I3158t" FT /product="transfer RNA-Asp" FT tRNA complement(1149083..1149170) FT /locus_tag="VSAL_I3159t" FT /product="transfer RNA-Ser" FT CDS complement(1149433..1151238) FT /transl_table=11 FT /locus_tag="VSAL_I1057" FT /old_locus_tag="TVS0931" FT /product="putative sulfatase" FT /db_xref="GOA:B6EIU8" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR012159" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR024588" FT /db_xref="UniProtKB/TrEMBL:B6EIU8" FT /protein_id="CAQ78742.1" FT /translation="MVDSGNTYGDKVSKLITWGHWFSFFNIIAAMLIGSRYISQSPWPE FT TLLGQTYLVLNWIGHFGFLVFGFYILVLFPLTFITPSQRLMRVLSVIIATAGMTLLLLD FT TYAYQNLHLHITPLVWDMLLNNDKSNLNTQWQYLFIVVPVIFLLQLSLSEWVWNKLRKL FT AHKQVGRPFAILFSVAFIGSHLIHTWADASAYGPVTAQRATFPLSYPMTARSFLEKHGF FT IDREALAKQIEDEGTGGATEAMRYPLEPIKFKSKQKEYNLQIIMVDSLRADTLNHTDTP FT NLTRFAQNNLNYNNHYSASNNPTSLFGLFYGLPGSYVDNFRNSHKASPVLAELHNRNYT FT FGLFSGDDFDSSLYKQLIFTHGELAEKPEKMSDTKAISQWNTWFTQQTTDQPWFSYLEL FT TAVSEYDDVGSISTNAGQHAFEANYRKAVQKTDQQLKAVLNTLKQSPDWEKTIVIITSN FT HGMEFDETNSNSWGSNTNFSQYQLRVPMLIHWPNAEPELITTRSSHLDLTPTLMESFLS FT TTTPAESYSSGINLFSPNDDRSWLLAGDRQNIALITDENTVVIDKFGNYKVYDENYQRL FT RDEKPKLSLLMQGISELKRFYHPKN" FT misc_feature complement(1149499..1150464) FT /locus_tag="VSAL_I1057" FT /note="HMMPfam hit to PF00884, Sulfatase, score 1.6e-19" FT /inference="protein motif:HMMPfam:PF00884" FT misc_feature complement(order(1150669..1150737,1150771..1150839, FT 1150915..1150983,1151002..1151070,1151137..1151205)) FT /locus_tag="VSAL_I1057" FT CDS complement(1151258..1151485) FT /transl_table=11 FT /locus_tag="VSAL_I1058" FT /old_locus_tag="TVS0932" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009857" FT /db_xref="InterPro:IPR023202" FT /db_xref="UniProtKB/Swiss-Prot:B6EIU9" FT /protein_id="CAQ78743.1" FT /translation="MAITSKYSNKQIEQMLTEMVDVLDKHRAPADLSLMLVGNIATNVL FT NQEVPAEQRKIIAEKFAQALLSSLDIPKTH" FT misc_feature complement(1151279..1151485) FT /locus_tag="VSAL_I1058" FT /note="HMMPfam hit to PF07208, Protein of unknown function FT (DUF1414), score 5.3e-43" FT /inference="protein motif:HMMPfam:PF07208" FT CDS 1151562..1152578 FT /transl_table=11 FT /gene="ndpA" FT /locus_tag="VSAL_I1059" FT /old_locus_tag="TVS0933" FT /product="nucleoid-associated protein Ndpa" FT /db_xref="GOA:B6EIV0" FT /db_xref="InterPro:IPR007358" FT /db_xref="UniProtKB/Swiss-Prot:B6EIV0" FT /protein_id="CAQ78744.1" FT /translation="MSLILSNVILHKLVKNEQDELEVCLRNQLLENEEFTEALVSELHR FT VFNSKAGKGFGIFKTESEFGHWLGSVRKNETPFLEFSNKSAEKLKSELIKYPFAEEGIL FT VIAEYQSLATEYLFVAVLPSNESMKVTDELNISATDYLDIAKMDIAARIDLSTWETDSD FT SNRYLTFIKGRVGRKVSDFFLDFLQADVGMDTKVQNQVLMQAVEDFCADERLEKEEKQQ FT YRKQVYDYCNGQLQAGEELTVKELSGELPTSESGSNFYQFAEEQGYELEESFPVDRTAL FT RKLTKFVGAGGGLSLNFDAMLLGERVFYDPETDTLTIKGTPPNLKDQLTRRLGSSES" FT misc_feature 1151568..1152557 FT /gene="ndpA" FT /locus_tag="VSAL_I1059" FT /note="HMMPfam hit to PF04245, 37-kD nucleoid-associated FT bacterial protein, score 4.9e-199" FT /inference="protein motif:HMMPfam:PF04245" FT CDS 1152720..1153910 FT /transl_table=11 FT /locus_tag="VSAL_I1060" FT /old_locus_tag="TVS0934" FT /product="putative exported protein" FT /note="Expression may be stress-induced and regulated by FT Fur" FT /db_xref="UniProtKB/TrEMBL:B6EIV1" FT /protein_id="CAQ78745.1" FT /translation="MKHTSKFFSIFLSLFVLNGCSLLELKIESQSVPLTTAELNTRILT FT RAYSKHFFSEVESAADEISAMYPKDDTLHQSYVLLWKIHAEEGLQHAAYQVSPTISLID FT TWVFAAQMEQFFSDDGKGADVFEGNIDFKTSQLLHIDIEALAKKLLPSSEFNEAKDFIA FT QFVAEHPFDSVAMRRTPALKAWLADQNIDETEAVATLGSMPEALGDVSDQLSLVSEQTP FT KIMTWKAQLIAMNSNLNGDDINKTMESLRNTSESFQDFVNNNPEYMQNLAEQMSLQLQP FT LLDDLDNKTDDKLNQLSAERIALEAMVARERQELVNMVERERKAIAVIVSQEREKFTQD FT LDQVSQDVLTLAMDKVIDLIKSTIIYFILFILAIFFAPLGLGYFLGKRAAVKKTVV" FT sig_peptide 1152720..1152788 FT /locus_tag="VSAL_I1060" FT misc_feature 1153806..1153874 FT /locus_tag="VSAL_I1060" FT repeat_region complement(1154076..1156292) FT /note="VSa2" FT repeat_region complement(1154076..1154099) FT /note="IR of VSa2" FT CDS complement(1154092..1155579) FT /transl_table=11 FT /locus_tag="VSAL_I1061" FT /old_locus_tag="TVS0935" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EIV2" FT /protein_id="CAQ78746.1" FT /translation="MIDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT CDS complement(1155651..1155998) FT /transl_table=11 FT /locus_tag="VSAL_I1062" FT /old_locus_tag="TVS0937" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78747.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT misc_feature complement(1155657..1155983) FT /locus_tag="VSAL_I1062" FT /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score FT 5.1e-32" FT /inference="protein motif:HMMPfam:PF05717" FT misc_feature complement(1155792..1156293) FT /locus_tag="VSAL_II0830" FT /note="HMMPfam hit to PF00248, Aldo/keto reductase FT family,score 1.1e-43" FT /inference="protein motif:HMMPfam:PF00248" FT CDS complement(join(1155995..1156048,1156047..1156211)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1063" FT /old_locus_tag="TVS0938" FT /product="transposase (pseudogene)" FT /note="Similar to Pseudoalteromonas haloplanktis (strain FT TAC 125) putative orphan protein putative transposase. FT UniProt:Q3IIG2 (EMBL:CR954246) (99 aa) fasta scores: FT E()=0.05, 35.294% id in 51 aa. CDS is contains a frameshift FT and a possible truncation of aa residues after codon 55" FT /db_xref="PSEUDO:CAQ78748.1" FT /inference="similar to sequence:UniProt:Q3IIG2" FT repeat_region complement(1156269..1156292) FT /note="IR of VSa2" FT CDS 1156366..1157490 FT /transl_table=11 FT /gene="rnd" FT /locus_tag="VSAL_I1064" FT /old_locus_tag="TVS0939" FT /product="ribonuclease D (rnase d)" FT /EC_number="3.1.26.3" FT /db_xref="GOA:B6EIV5" FT /db_xref="InterPro:IPR002121" FT /db_xref="InterPro:IPR002562" FT /db_xref="InterPro:IPR006292" FT /db_xref="InterPro:IPR010997" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:B6EIV5" FT /protein_id="CAQ78749.1" FT /translation="MEFEIVKHSQRLAEICQQASNKPFLMLDTEFVRTRTLYARLGLIQ FT MFDGETLALVDPVEIDDLTPLWDLLKNESVTKVLHACGEDLEVFQHYAGCMPTPMIDTQ FT IMAAFLGYGLSTGFAKLVSDYLGVDLDKGESRTDWMARPLSDKQLDYAAADVHYLLPLF FT EKLQAELAQTEWEKAAYQESLLAVKKREKQPDPEKAYLDIKNAWQLNGKQLAILKMAAQ FT WRLEEARKRDLAVNFVVQELNLWKLARFGLRSKEQMLKEEFDSREVQRHGGKLLRFTYL FT ADELNENEYPETLTRLMDYPGYKQIFKLLKDEVKAASDQSGLMPEFLASKKQLNQLLSW FT KWKKNSHPDLKPDVLKEWREGLLAERFMAVLDKS" FT misc_feature 1156372..1156878 FT /gene="rnd" FT /locus_tag="VSAL_I1064" FT /note="HMMPfam hit to PF01612, 3'-5' exonuclease, score FT 3.5e-52" FT /inference="protein motif:HMMPfam:PF01612" FT CDS complement(1157566..1157826) FT /transl_table=11 FT /gene="minE" FT /locus_tag="VSAL_I1065" FT /old_locus_tag="TVS0940" FT /product="cell division topological specificity factor" FT /db_xref="GOA:B6EIV6" FT /db_xref="InterPro:IPR005527" FT /db_xref="UniProtKB/Swiss-Prot:B6EIV6" FT /protein_id="CAQ78750.1" FT /translation="MALLEFFRPQKKATANIAKERLQIIVAERRNGGPAPSYLPQLKED FT ILKVISKYVNVSPDMITVSLEQKEEDLSVLELNITLPEDDN" FT misc_feature complement(1157578..1157826) FT /gene="minE" FT /locus_tag="VSAL_I1065" FT /note="HMMPfam hit to PF03776, Septum formation topological FT specificity fac, score 7.4e-49" FT /inference="protein motif:HMMPfam:PF03776" FT CDS complement(1157829..1158641) FT /transl_table=11 FT /gene="minD" FT /locus_tag="VSAL_I1066" FT /old_locus_tag="TVS0941" FT /product="septum site-determining protein MinD (cell FT division inhibitor MinD)" FT /db_xref="GOA:B6EIV7" FT /db_xref="InterPro:IPR002586" FT /db_xref="InterPro:IPR010223" FT /db_xref="UniProtKB/TrEMBL:B6EIV7" FT /protein_id="CAQ78751.1" FT /translation="MARIVVVTSGKGGVGKTTSSSAIASGLALAGKKTAVIDFDIGLRN FT LDLIMGCERRVVYDFVNVINGEATLNQALIKDKRVGNLFILPASQTRDKDALTKEGVRR FT VLDELIAMNFDFIICDSPAGIEAGALMALYFADEAIITTNPEVSSVRDSDRILGILDSK FT SHRSEEALEPVKQHLLLTRYCPTRVNQGEMLSVGDVEEILNIPLLGVIPESQSVLNASN FT KGVPVIFDEESNAGSAYQDAVDRLLGKEVSFRFLEEEKKGIFKRLFGG" FT misc_feature complement(1157985..1158629) FT /gene="minD" FT /locus_tag="VSAL_I1066" FT /note="HMMPfam hit to PF01656, CobQ/CobB/MinD/ParA FT nucleotide binding domai, score 1.9e-23" FT /inference="protein motif:HMMPfam:PF01656" FT misc_feature complement(1158591..1158614) FT /gene="minD" FT /locus_tag="VSAL_I1066" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1158665..1159330) FT /transl_table=11 FT /gene="minC" FT /locus_tag="VSAL_I1067" FT /old_locus_tag="TVS0942" FT /product="septum site-determining protein MinC (cell FT division inhibitor)" FT /db_xref="GOA:B6EIV8" FT /db_xref="InterPro:IPR005526" FT /db_xref="InterPro:IPR007874" FT /db_xref="InterPro:IPR013033" FT /db_xref="InterPro:IPR016098" FT /db_xref="UniProtKB/Swiss-Prot:B6EIV8" FT /protein_id="CAQ78752.1" FT /translation="MTKTADLKGSNFTLSVLHLPNDDITQALSMLEQKVAQAPSFFASA FT PVVINIENVSNEINFVDLKLGVERTGMIPVGITGCKDKEKQAQATSAGFAVMTSFTPQQ FT VTQKANMQPTKVVRTPIRSGQQVYAKDADLVILNHVSPGAEVIADGSIHIHGTLRGRAI FT AGASGQKEAKIFCKNLQAELISIAGNYWLSDQINKEYWHQNVMVTMVEDHIKIDTLTL" FT misc_feature complement(1158674..1159000) FT /gene="minC" FT /locus_tag="VSAL_I1067" FT /note="HMMPfam hit to PF03775, Septum formation inhibitor FT MinC, C-terminal, score 5.1e-60" FT /inference="protein motif:HMMPfam:PF03775" FT misc_feature complement(1159022..1159330) FT /gene="minC" FT /locus_tag="VSAL_I1067" FT /note="HMMPfam hit to PF05209, Septum formation inhibitor FT MinC, N-terminal, score 1.3e-28" FT /inference="protein motif:HMMPfam:PF05209" FT CDS 1159542..1159823 FT /transl_table=11 FT /locus_tag="VSAL_I1068" FT /old_locus_tag="TVS0943" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007840" FT /db_xref="UniProtKB/Swiss-Prot:B6EIV9" FT /protein_id="CAQ78753.1" FT /translation="MYCSIYKSSKKQGAYLYIEKKDDFSPVPQELMTMFGTPKMVMVVN FT LEGRKLASVDIEKVEVSLKNDGYFLQLPPPPENLLEKYKQDKAKRNEK" FT misc_feature 1159545..1159787 FT /locus_tag="VSAL_I1068" FT /note="HMMPfam hit to PF05166, Family of unknown function FT (DUF709), score 2.8e-42" FT /inference="protein motif:HMMPfam:PF05166" FT CDS 1159825..1160799 FT /transl_table=11 FT /locus_tag="VSAL_I1069" FT /old_locus_tag="TVS0944" FT /product="putative exported protein" FT /db_xref="InterPro:IPR011970" FT /db_xref="InterPro:IPR023346" FT /db_xref="UniProtKB/TrEMBL:B6EIW0" FT /protein_id="CAQ78754.1" FT /translation="MKKRLLLGIVSLLMATSVSANTPEGDFQDYIVNLKNEARENGISE FT PILERAFKNVAFKEKAVKSDRNQPEKKLTLDEYIPRAVPKWKIKQANDLYQKHHEVLTR FT IGKEYGVQPRFIVALWGVESNFGKLTGGYNVIEALTTLAYDGRREAFFRKQTMAALTIL FT EQGHITPENMKGSWAGAMGQCQFMPTSFLAYAVDGNDDGRKDIWTTHADVFASAANYLK FT QVGWDDTYTWGRQVTLPDAFDAEALKGLSEDKGKLLSEWGALGVRRLNGKSLPNVELEA FT WLVQPDDNDGRAYLVYNNYQVLMDWNRSHYFALAVSHLADSIK" FT sig_peptide 1159825..1159884 FT /locus_tag="VSAL_I1069" FT misc_feature 1159918..1159983 FT /locus_tag="VSAL_I1069" FT /note="Predicted helix-turn-helix motif with score FT 1111.000, SD 2.97 at aa 32-53, sequence FT VNLKNEARENGISEPILERAFK" FT CDS complement(1160921..1162963) FT /transl_table=11 FT /locus_tag="VSAL_I1070" FT /old_locus_tag="TVS0945" FT /product="FAD dependent oxidoreductase" FT /db_xref="GOA:B6EIW1" FT /db_xref="InterPro:IPR006076" FT /db_xref="InterPro:IPR008471" FT /db_xref="InterPro:IPR017610" FT /db_xref="InterPro:IPR023032" FT /db_xref="UniProtKB/TrEMBL:B6EIW1" FT /protein_id="CAQ78755.1" FT /translation="MSQNHVIPKNNITNAVLEWNESGTPVSNDFDDVYFSNDNGLEETR FT YVFLQQNHLLQRWQECDLRRFVIGETGFGTGLNFLAVWQCFKEFRAQYPDAPLKELHFV FT SFEKFPVTKSDLVKAHQAWPELAEFAEQLHKYYPAAVPDCHRLVLEEGMITLDLWFGDI FT KDCMPQIWMDDHGIIDAWFLDGFAPSKNPEMWNQNLFDNMANLAKEHCTCATFTSAGFV FT RRGLIEAGFDMKKVKGFAHKREMIAGTLTERKAKANHAVWYARTTPKEVTDVAIIGGGV FT ASAALAMTLLRRGVKVTVYCKDEKAAQGASGNQQGAVYPLLNEKYNSLSRFFAPGFIFA FT RQFIEQAAEQVEFDHDWCGVTQLKWDDKSEKKLNKMLTAHFPNELVTELNKEDTNLHVG FT LPINMESVHYPLGGWLCPKQLTRGLFDHFAANPLFTLHCDSEVTSLQQSNDKQWHVLLG FT DSVHPHQTVIVANGHRFTDFEQTKDIPATAVRGQVSHIPTTESLKKLNTVLCYDGYLTP FT ENTKYQTHCIGASYDRRDLDLKFKESDQVENGERLHKCIPNEVWPKEADTSSNQARVGI FT RCASRDHLPFIGNVVRFEAMQEEYKNLYKKRHWQRDAKEIPIYEGLFCMLTLGSRGLSS FT APLLAETLVSQIMGDPIPLPNSVLEGLHPGRLWVRRLLKGKPLDI" FT misc_feature complement(1161026..1162147) FT /locus_tag="VSAL_I1070" FT /note="HMMPfam hit to PF01266, FAD dependent FT oxidoreductase, score 7.3e-42" FT /inference="protein motif:HMMPfam:PF01266" FT misc_feature complement(1161206..1162162) FT /locus_tag="VSAL_I1070" FT /note="HMMPfam hit to PF06039, Malate:quinone FT oxidoreductase (Mqo), score 0.0037" FT /inference="protein motif:HMMPfam:PF06039" FT misc_feature complement(1162211..1162918) FT /locus_tag="VSAL_I1070" FT /note="HMMPfam hit to PF05430, Protein of unknown function FT (DUF752), score 1.8e-130" FT /inference="protein motif:HMMPfam:PF05430" FT CDS 1163084..1164295 FT /transl_table=11 FT /gene="fabB" FT /locus_tag="VSAL_I1071" FT /old_locus_tag="TVS0946" FT /product="3-ketoacyl-ACP synthase FabB" FT /EC_number="2.3.1.41" FT /db_xref="GOA:B6EIW2" FT /db_xref="InterPro:IPR000794" FT /db_xref="InterPro:IPR014030" FT /db_xref="InterPro:IPR014031" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR018201" FT /db_xref="UniProtKB/TrEMBL:B6EIW2" FT /protein_id="CAQ78756.1" FT /translation="MKRAVITGMGIVSSIGNNVEEVLESLKAGKSGINFSEQFAEKGLR FT SNVWGNLKMNPADHIDRKKMRFMGDAAAFAYISMEQAVADSGLTEDQVSNDRTGIVAGS FT GGASSLNQVNAVDILREKGVKRVGPYMVPRTMASTVSACLATPFKIRGVNYSMSSACAT FT SAHCIGHAVELIQLGKQDVMFAGGGEELDWSLTMMFDAMGALSSKYNDTPDKASRTYDT FT DRDGFVISGGGGMVVIEELEHALARGAKIYGEVVGYGATSDGYDMVAPSGEGAVRCMKM FT AMQNVDSVDYVNTHGTSTPVGDAKELGAIQEVFGTNSPAISATKAMTGHALGAAGVHEA FT IYSTLMLEHGFIAPSINIETLDPAAEGLDIVTEKRDQELTTVMSNSFGFGGTNATLVIK FT KFEA" FT misc_feature 1163087..1163815 FT /gene="fabB" FT /locus_tag="VSAL_I1071" FT /note="HMMPfam hit to PF00109, Beta-ketoacyl FT synthase,N-terminal do, score 1.1e-61" FT /inference="protein motif:HMMPfam:PF00109" FT misc_feature 1163537..1163587 FT /gene="fabB" FT /locus_tag="VSAL_I1071" FT /note="PS00606 Beta-ketoacyl synthases active site." FT /inference="protein motif:ProSite:PS00606" FT misc_feature 1163837..1164286 FT /gene="fabB" FT /locus_tag="VSAL_I1071" FT /note="HMMPfam hit to PF02801, Beta-ketoacyl FT synthase,C-terminal do, score 1e-60" FT /inference="protein motif:HMMPfam:PF02801" FT CDS 1164455..1165585 FT /transl_table=11 FT /gene="pdxB" FT /locus_tag="VSAL_I1072" FT /old_locus_tag="TVS0947" FT /product="erythronate-4-phosphate dehydrogenase" FT /EC_number="1.1.1.-" FT /note="Expression may be stress-induced" FT /db_xref="GOA:B6EIW3" FT /db_xref="InterPro:IPR006139" FT /db_xref="InterPro:IPR006140" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020921" FT /db_xref="InterPro:IPR024531" FT /db_xref="UniProtKB/Swiss-Prot:B6EIW3" FT /protein_id="CAQ78757.1" FT /translation="MKILIDENMPYAAELFSELGEVIAKSGRTLTADDLIDVDALMIRS FT VTKVNSELLSKANKLSFVGTATAGMDHVNQALLKNKGVFFTAAPGCNKVGVAEYVLSCV FT MVLAQQHGFSIFDKTFGIIGAGQVGSYLAQCLDALSIPYLLNDPIKEQEGDTRSFVSLD FT ELLEKSDVISLHTPITRDGNFPTHHLIGQERLLTLRHDQILINAARGPVVDNDALKNRL FT LIQDGFKAVLDVFEFEPEVDIALLPLLSFATPHIAGYGLEGKARGTTMIFNSFCEFLQR FT EERADPQNLLPVAPIPNVTLNQQWDHSTLHNLIQLVYDVRKDDAVFRKEISTIGAFDNM FT RKDYWDRREYSAITITGNKDCGLTPLKQLGFTIEEV" FT misc_feature 1164461..1165330 FT /gene="pdxB" FT /locus_tag="VSAL_I1072" FT /note="HMMPfam hit to PF00389, D-isomer specific FT 2-hydroxyacid dehydrog, score 5.6e-31" FT /inference="protein motif:HMMPfam:PF00389" FT misc_feature 1164632..1165225 FT /gene="pdxB" FT /locus_tag="VSAL_I1072" FT /note="HMMPfam hit to PF02826, D-isomer specific FT 2-hydroxyacid dehydrog, score 3.3e-17" FT /inference="protein motif:HMMPfam:PF02826" FT CDS 1165585..1166598 FT /transl_table=11 FT /gene="asd" FT /locus_tag="VSAL_I1073" FT /old_locus_tag="TVS0948" FT /product="aspartate-semialdehyde dehydrogenase" FT /EC_number="1.2.1.11" FT /db_xref="GOA:B6EIW4" FT /db_xref="InterPro:IPR000319" FT /db_xref="InterPro:IPR000534" FT /db_xref="InterPro:IPR005986" FT /db_xref="InterPro:IPR012080" FT /db_xref="InterPro:IPR012280" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EIW4" FT /protein_id="CAQ78758.1" FT /translation="MTQEFDVAILGATGAVGEAIINVLQERKFPVRNLYLLASERSEGK FT TVRFNGKTLTVENVEEFDWSQVQLGLFSAGSELSAKWAPIAAESGVVVIDNTSHFRYDQ FT DIPLVIPEVNPEALADFRNRNIIANPNCSTIQMLVALKPIHDAVGIDRINVSTYQSVSG FT SGKAGIDELAGQTAKLLNGLPAENKAYDKQIAFNCLPHIDEFMDNGYTKEEMKMVWETQ FT KIFADESITVNATCVRVPVFYGHAESVHVETRAPIDAEEATRLLEETDGIEVFHGNDYP FT TQVSDATGKDHVMVARIRADISHPMGLNMWVVADNVRKGAATNAVQIAEVLIRDYY" FT misc_feature 1165600..1165947 FT /gene="asd" FT /locus_tag="VSAL_I1073" FT /note="HMMPfam hit to PF01118, Semialdehyde FT dehydrogenase,NAD bindi, score 1e-47" FT /inference="protein motif:HMMPfam:PF01118" FT misc_feature 1166005..1166541 FT /gene="asd" FT /locus_tag="VSAL_I1073" FT /note="HMMPfam hit to PF02774, Semialdehyde FT dehydrogenase,dimerisat, score 2.4e-82" FT /inference="protein motif:HMMPfam:PF02774" FT misc_feature 1166278..1166322 FT /gene="asd" FT /locus_tag="VSAL_I1073" FT /note="PS01103 Aspartate-semialdehyde dehydrogenase FT signature." FT /inference="protein motif:ProSite:PS01103" FT CDS 1166802..1170623 FT /transl_table=11 FT /locus_tag="VSAL_I1074" FT /old_locus_tag="TVS0950" FT /product="putative membrane protein" FT /db_xref="InterPro:IPR020011" FT /db_xref="InterPro:IPR020012" FT /db_xref="UniProtKB/TrEMBL:B6EIW5" FT /protein_id="CAQ78759.1" FT /translation="MSDASKKFFKTLTPLALFVASQCSVANAASTIQIVGPDGKDQTIS FT SQVVDPTSSIRTSTVTTSASVAKAPTATKIYGPTGENETLWSIASRVNPSTTTSVQQTL FT LAIYRLNPQAFENNNIHGLEPKSRLRLPTLEQVRRENTDDAKQLLAAHKKKQTAQKKAE FT TRSSVAPKASTEPKVDVKPKLEKPTFTEKKTAVEKTVAPIMAEKTAGLGELKTELATTE FT QEFSALQENNHQLRVRLAEVQNEVDNLKNELGNEDRIRNEVEKFITEQKQLAVSEKKAE FT PSSMDKLASSPGLIALLALIPGALIAGLIAFFLSRRKKEEEEEAEAEAEENTQTDLPSA FT LIMPDDHFNMDDDIPEISLDDDDDILGDLDNDEFLFGDDTNTDSNDDLFAEFENENTDS FT LDDPFASLDDEDDLDSLLSKGDSELSDLDDLDSLDDLDDDLDMSGSALTVDAEEKALGL FT EEMEKALNDFDSDLFSKSDLEAEDDDFDLSLIDDSDLSAVDKKSPELEGNEDLDGGELD FT QSMLDDLFSSMDTEEDEESVLEQGWDLDEKEETKIVSEPEKSGLEEDVDFESLLGDMAD FT TEDNSIDFNLDDDTEVLNNILPEQNEKADTSLNFEDDSTALLDEMLAEADDDDINLDID FT DDNTSLLDEMLAESNDDDDLELDDNSTALLDELLEESDHDSTDLDDIEIDEDSTALLDE FT LLAGDDNDDSTFELDENSTDLLDELIGDDSDEEEALGKSGDDAEEGVTVSETLSEETPR FT DEDWLVESDDEEDDISLFEPETAVETEAFDIDEEELPLESEIPTDNVLEDDVIETLNTD FT AEEHDDVELAEEAESASQENDELDAFDIDEEELPLESEMPADNVLEDDVIETLNTDAEE FT HDDVELAEEAESDSQENDELDAFDIDDEELLLESEMPTDSEDLNESAISDLLSEQEEQE FT SLFDEINVDDELLLDNEERPQEQEVSSQLEETETATEEDETLSELDDLLADFDTDVEIS FT DEEAGIETPEIEELVTDEESEMPLSDMISEDENEDESDFSLDDFVASNATDFTDDSREH FT DTELSETNNEEDILPLVDDIEKEDHQFDGLSIEDALAALEEEDDLQVTPLTDETAAPFN FT FSSQVSDEEKEALTHVDSAGLDIDSMLEDGGSDWSGFSLDDTSNVDDALEDEDWSEQPN FT LENTPNRADQFLSIDALIAEAESGERTDIDDEELNLDVGLDEFPDVLGNVEAHDVDINS FT DAHSKLDLAKAYIEMSDDKGALELLEEVLRCDDPLLKVEAEKLMKQLD" FT sig_peptide 1166802..1166885 FT /locus_tag="VSAL_I1074" FT misc_feature 1167678..1167746 FT /locus_tag="VSAL_I1074" FT CDS 1170713..1171501 FT /transl_table=11 FT /gene="truA" FT /locus_tag="VSAL_I1075" FT /old_locus_tag="TVS0951" FT /product="tRNA pseudouridine synthase A" FT /EC_number="5.4.99.12" FT /db_xref="GOA:B6EIW6" FT /db_xref="InterPro:IPR001406" FT /db_xref="InterPro:IPR020094" FT /db_xref="InterPro:IPR020095" FT /db_xref="InterPro:IPR020097" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/Swiss-Prot:B6EIW6" FT /protein_id="CAQ78760.1" FT /translation="MRIALCIEYDGASYHGWQSQKDVTSVQEELEKALMVVANEPIEVM FT CAGRTDAGVHGTGQVVHFDTNSVRKLPVWMVGVNANLPKNIAVRWVKEVNEDFHARFTA FT TARRYRYIIFNNRQRPAIFSHGVSHYHETLDADLMHEAGQYLLGENDFTSFRAVRCQSR FT TPWRNLIHLKVTRHGDFIVIDIKANAFVHHMVRNITGSLIEVGRGKQKPEWVQWLLEAK FT DRKLAGATAKAEGLYLIDVDYPKEWDLPRVPLGPLFLPDN" FT misc_feature 1170725..1171021 FT /gene="truA" FT /locus_tag="VSAL_I1075" FT /note="HMMPfam hit to PF01416, tRNA pseudouridine synthase, FT score 3.8e-33" FT /inference="protein motif:HMMPfam:PF01416" FT misc_feature 1171136..1171444 FT /gene="truA" FT /locus_tag="VSAL_I1075" FT /note="HMMPfam hit to PF01416, tRNA pseudouridine synthase, FT score 3.2e-33" FT /inference="protein motif:HMMPfam:PF01416" FT CDS 1171682..1172572 FT /transl_table=11 FT /gene="accD" FT /locus_tag="VSAL_I1076" FT /old_locus_tag="TVS0952" FT /product="acetyl-coenzyme A carboxylase carboxyl FT transferase subunit beta" FT /EC_number="6.4.1.2" FT /db_xref="GOA:B6EIW7" FT /db_xref="InterPro:IPR000022" FT /db_xref="InterPro:IPR000438" FT /db_xref="InterPro:IPR011762" FT /db_xref="UniProtKB/TrEMBL:B6EIW7" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ78761.1" FT /translation="MSWLEKIFNTSNIVSSRKASIPEGVWTKCTSCEQVLYSAELERNL FT EVCPKCDHHMRMKARKRLETFLDAEGRVELGQEFEPKDLLKFKDSKRYKDRISAAQKSS FT NETDALIVMQGTLLELPIVACAFEFSFMGGSMGSVVGARFVKAVDAAIENNCPLVCFSA FT SGGARMQEALMSLMQMAKTSAALARLSRKGLPFFSVLTDPTMGGVSASLAMLGDINIGE FT PKALIGFAGRRVIEQTVREDLPEGFQRSEFLLEHGAIDMIVDRREMRQRIGGLMAKMTN FT QASPLVVPVDGSVKN" FT CDS 1172671..1173951 FT /transl_table=11 FT /gene="folC" FT /locus_tag="VSAL_I1077" FT /old_locus_tag="TVS0953" FT /product="FolC bifunctional protein (tetrahydrofolate FT synthase) (folylpolyglutamate synthase)" FT /EC_number="6.3.2.12" FT /db_xref="GOA:B6EIW8" FT /db_xref="InterPro:IPR001645" FT /db_xref="InterPro:IPR004101" FT /db_xref="InterPro:IPR013221" FT /db_xref="InterPro:IPR018109" FT /db_xref="UniProtKB/TrEMBL:B6EIW8" FT /protein_id="CAQ78762.1" FT /translation="MTTFDSPTATSDLSVWLRYLESIHTSAIDLGLDRVQRVAQRAKLT FT KPAPTVITVAGTNGKGSTCALMESILLNAGYRVGVYSSPHLIRYNERIRINGNDLSDSL FT ISQSFAAIEAWRKDTPLSLFEFGTLAALWAFKAHQVDVLLLEVGLGGRLDATNVVDHDV FT SIITSLAVDHVDWLGDDINVIGFEKAGIFRSDKPAICGQPNPPSSVAAHADDINADLHQ FT VGYQFTYKVNEDNKTWSWQSGAFDLTGLPLPKLPLANAATAIMALGCADLELTDVNIVE FT GLKAASLPGRMQILTRDEESIEPLILLDVAHNPHSAHYLVQQVRLRYPNKKIHAVVGML FT HDKDIESTVNEFTGVVDVWYPASLSGPRAAKASELVAFIEQETTEYSSPVEAFKVALQH FT AGDDELILVFGSFHTVGEVWNYWKQGS" FT misc_feature 1172824..1173480 FT /gene="folC" FT /locus_tag="VSAL_I1077" FT /note="HMMPfam hit to PF08245, Mur ligase middle FT domain,score 1.7e-06" FT /inference="protein motif:HMMPfam:PF08245" FT misc_feature 1172824..1172895 FT /gene="folC" FT /locus_tag="VSAL_I1077" FT /note="PS01011 Folylpolyglutamate synthase signature 1." FT /inference="protein motif:ProSite:PS01011" FT misc_feature 1173100..1173147 FT /gene="folC" FT /locus_tag="VSAL_I1077" FT /note="PS01012 Folylpolyglutamate synthase signature 2." FT /inference="protein motif:ProSite:PS01012" FT misc_feature 1173532..1173801 FT /gene="folC" FT /locus_tag="VSAL_I1077" FT /note="HMMPfam hit to PF02875, Mur ligase family,glutamate FT ligase doma, score 0.0019" FT /inference="protein motif:HMMPfam:PF02875" FT CDS 1173961..1174530 FT /transl_table=11 FT /locus_tag="VSAL_I1078" FT /old_locus_tag="TVS0954" FT /product="putative sporulation and cell division protein" FT /db_xref="GOA:B6EIW9" FT /db_xref="InterPro:IPR007730" FT /db_xref="UniProtKB/TrEMBL:B6EIW9" FT /protein_id="CAQ78763.1" FT /translation="MSSPFQRRLVGTIILVAIGVIVLPDLFDGKKKSYQEEFASIPIKP FT ELSKDVEQFAIQEPIDFDAELPGEPVEVTVGSSPTEPEKEVLTIVTKPASIEAEKTPKI FT DYAKSAWVIQLGVFRNADNAKNLALKLRKQGFQAHTFPKNPKEGDLVRVAVGPDVSKPD FT LEKQLPKLKEITGLNGQLLKFAPLNP" FT misc_feature 1174279..1174509 FT /locus_tag="VSAL_I1078" FT /note="HMMPfam hit to PF05036, Sporulation related FT domain,score 1.2e-15" FT /inference="protein motif:HMMPfam:PF05036" FT CDS 1174592..1175083 FT /transl_table=11 FT /gene="cvpA" FT /locus_tag="VSAL_I1079" FT /old_locus_tag="TVS0955" FT /product="colicin V production protein (protein DedE)" FT /db_xref="GOA:B6EIX0" FT /db_xref="InterPro:IPR003825" FT /db_xref="UniProtKB/TrEMBL:B6EIX0" FT /protein_id="CAQ78764.1" FT /translation="MIWIDFVILGVISLSAFISLIRGFVKEALSLVIWFGAFFVASNFY FT PKLAAYFTNIHDEMVRNGSAIAALFVATLIVGAVVNYVVAQLVQKTGLSGTDRVLGVVF FT GGLRGVLIIAAVLFFIDAFTSLSDSEWWKQSQLIPQFSVVIEWFFDYLKDTSSFLPGAK FT " FT misc_feature 1174598..1175053 FT /gene="cvpA" FT /locus_tag="VSAL_I1079" FT /note="HMMPfam hit to PF02674, Colicin V production FT protein, score 1.4e-56" FT /inference="protein motif:HMMPfam:PF02674" FT misc_feature order(1174601..1174663,1174682..1174750,1174778..1174846, FT 1174883..1174951) FT /gene="cvpA" FT /locus_tag="VSAL_I1079" FT CDS 1175118..1176632 FT /transl_table=11 FT /gene="purF" FT /locus_tag="VSAL_I1080" FT /old_locus_tag="TVS0956" FT /product="amidophosphoribosyltransferase" FT /EC_number="2.4.2.14" FT /db_xref="GOA:B6EIX1" FT /db_xref="InterPro:IPR000583" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR005854" FT /db_xref="InterPro:IPR017932" FT /db_xref="UniProtKB/TrEMBL:B6EIX1" FT /protein_id="CAQ78765.1" FT /translation="MCGIVGIVGATPVNQLIYDALTVLQHRGQDAAGIITVESNRFRLR FT KANGLVKDVFEAKHMQRLKGNVGIGHVRYPTAGSSSASEAQPFYVNSPFGITLAHNGNL FT TNANEIRETLFEQERRHVNTTSDSEVLLNIFAHHLDSTTHYPLTADDIFKTVANVHEQI FT RGAYAVTAMIIGHGMVAFRDPNGIRPLCLGKRDVEGRTEYMVASESVALDAVGFDFVRD FT VAPGEAIYAPFEGGLYTQQCAHDPKLNPCIFEFVYFARPDSFIDKISVYSARLEMGKRL FT GDKIKREWDDLDIDVVIPIPETSCDIALEIAQIINKPYRQGFVKNRYVGRTFIMPGQQE FT RKKSVRRKLNAIRSEFKDKNVLLVDDSIVRGTTSEQIIQMARDSGAKNVYMVSAAPEIR FT FPNVYGIDMPSANELIAHGREVDEICQKIGADALIFQDLSDLVDAVGCGNREVEQFETS FT VFNAHYVTGDVDQNYLEYLESLRGDDAKQESEAQDVASLDIYNEGV" FT misc_feature 1175121..1175744 FT /gene="purF" FT /locus_tag="VSAL_I1080" FT /note="HMMPfam hit to PF00310, Glutamine amidotransferases FT class-II, score 4.9e-55" FT /inference="protein motif:HMMPfam:PF00310" FT misc_feature 1175901..1176344 FT /gene="purF" FT /locus_tag="VSAL_I1080" FT /note="HMMPfam hit to PF00156, Phosphoribosyl transferase FT domain, score 2.5e-10" FT /inference="protein motif:HMMPfam:PF00156" FT misc_feature 1176198..1176236 FT /gene="purF" FT /locus_tag="VSAL_I1080" FT /note="PS00103 Purine/pyrimidine phosphoribosyl FT transferases signature." FT /inference="protein motif:ProSite:PS00103" FT CDS complement(1176715..1177590) FT /transl_table=11 FT /gene="aphB" FT /locus_tag="VSAL_I1081" FT /old_locus_tag="TVS0957" FT /product="transcriptional regulator AphB" FT /db_xref="GOA:B6EJ38" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EJ38" FT /protein_id="CAQ78766.1" FT /translation="MKLDDLNLFRQVVDNGSYTAASRKTLIPVATITRRIQALEDSLDI FT RLLNRHARKLSLTESGQKFYDECSPILSNLVNISEYLSEECRGAAGKLNIAAPSNLTKR FT MIQPILNQFMLIYPNININLTMSNQPEQLDPTDWDIIFRVGKQRDSSLIARQIGSLEDI FT LVASPIYLEQRSEPTHAQELHDHSLLKGHPLMRWRLTNIEGESVTITDAGRFEASELNV FT IRMACSDGLGITLMPDIMISKYLEDGSLVRVLKDWSANPRDIYMIYNYKDHQPEKVRLF FT IDFVSNHIPK" FT misc_feature complement(1176721..1177335) FT /gene="aphB" FT /locus_tag="VSAL_I1081" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 1.3e-37" FT /inference="protein motif:HMMPfam:PF03466" FT misc_feature complement(1177405..1177584) FT /gene="aphB" FT /locus_tag="VSAL_I1081" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 1.8e-16" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature complement(1177450..1177542) FT /gene="aphB" FT /locus_tag="VSAL_I1081" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature complement(1177480..1177545) FT /gene="aphB" FT /locus_tag="VSAL_I1081" FT /note="Predicted helix-turn-helix motif with score FT 1024.000, SD 2.67 at aa 16-37, sequence FT GSYTAASRKTLIPVATITRRIQ" FT CDS 1177829..1178932 FT /transl_table=11 FT /locus_tag="VSAL_I1082" FT /old_locus_tag="TVS0958" FT /product="response regulator" FT /db_xref="GOA:B6EJ39" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:B6EJ39" FT /protein_id="CAQ78767.1" FT /translation="MSIEQIKEKTKEDNTPVEDLLVNKDVLIVDDDPIFRSMVKAVLES FT YSCNVKEANNGLEGLQMLQHSLPDVLLCDLSMPILNGLEFVEEVVLEYPMLPIIVISGT FT GDMQDVAKVLRLGAKDFLVKPISNVSLLVKSLVSALKLSEESSLRMQDFSSQWFRTSDL FT DKSCTEELHWHLEHLQNEPNIGRELLFELLPESDAQHGEWKLAYRLLQSTDGMPLIFDY FT EWLLDGRLFFYLVDSQSGGENSVVSCLLIRAFFNDFIRDQHISLDVISKMVESIEKGMG FT TMEESESISALFGYVDFAEQALFILSAGLGAVWESTHSRHVLQIGELLTSERSNNKVQR FT FPIAKANNSLFLNCVGCSSFKMELNSF" FT misc_feature 1177898..1178239 FT /locus_tag="VSAL_I1082" FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 2.8e-32" FT /inference="protein motif:HMMPfam:PF00072" FT CDS 1178975..1179367 FT /transl_table=11 FT /locus_tag="VSAL_I1083" FT /old_locus_tag="TVS0959" FT /product="inner membrane protein" FT /note="Possible alternative translational start site after FT codon 9" FT /db_xref="InterPro:IPR007401" FT /db_xref="UniProtKB/TrEMBL:B6EJ40" FT /protein_id="CAQ78768.1" FT /translation="MYLNCRDTLLKFSHKILWFFFGGFFLLLGIIGIVLPLLPTTPFVL FT LASACFMRASPKIHLWLISHRYLGPPIVEWQSKKTINKKIKKKAVIMIVGSFVLSICIA FT PVIWVKGIIAVIGIALLIWFSKIPSS" FT misc_feature order(1179020..1179088,1179242..1179346) FT /locus_tag="VSAL_I1083" FT misc_feature 1179092..1179124 FT /locus_tag="VSAL_I1083" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 1179137..1179358 FT /locus_tag="VSAL_I1083" FT /note="HMMPfam hit to PF04304, Protein of unknown function FT (DUF454), score 3.5e-12" FT /inference="protein motif:HMMPfam:PF04304" FT CDS 1179452..1179997 FT /transl_table=11 FT /gene="apt" FT /locus_tag="VSAL_I1084" FT /old_locus_tag="TVS0960" FT /product="adenine phosphoribosyltransferase" FT /EC_number="2.4.2.7" FT /db_xref="GOA:B6EJ41" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR005764" FT /db_xref="UniProtKB/Swiss-Prot:B6EJ41" FT /protein_id="CAQ78769.1" FT /translation="MSTETLELIKNSIKSVPDYPKAGIMFRDVTSLMEDPKAYQATIQL FT LVEKYKQGGFTKIVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRPTIAQTYDLEYGT FT DTLEIHTDAIVEGDKVLVVDDLLATGGTIEATVKLIRQLGGDVQHAAFVINLPEIGGET FT RLEGLGLNVYSICEFPGH" FT misc_feature 1179533..1179943 FT /gene="apt" FT /locus_tag="VSAL_I1084" FT /note="HMMPfam hit to PF00156, Phosphoribosyl transferase FT domain, score 1.4e-50" FT /inference="protein motif:HMMPfam:PF00156" FT misc_feature 1179809..1179847 FT /gene="apt" FT /locus_tag="VSAL_I1084" FT /note="PS00103 Purine/pyrimidine phosphoribosyl FT transferases signature." FT /inference="protein motif:ProSite:PS00103" FT CDS 1180101..1182245 FT /transl_table=11 FT /gene="dnaX" FT /locus_tag="VSAL_I1085" FT /old_locus_tag="TVS0961" FT /product="DNA polymerase III subunit tau" FT /EC_number="2.7.7.7" FT /note="CDS contains around 100 additional internal amino FT acids, in comparison to Escherichia coli.; dnaX" FT /db_xref="GOA:B6EJ42" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR008921" FT /db_xref="InterPro:IPR012763" FT /db_xref="InterPro:IPR021029" FT /db_xref="InterPro:IPR022001" FT /db_xref="InterPro:IPR022754" FT /db_xref="UniProtKB/TrEMBL:B6EJ42" FT /protein_id="CAQ78770.1" FT /translation="MSYQVLARKWRPHHFKDVVGQSHVLTALENALDHNRLHHAYLFSG FT TRGVGKTTIARLFAKGLNCEEGITSTPCGVCSTCKEIDEGRFVDLLEIDAASRTKVEDT FT RDLLDNVQYKPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFILATTDPQKLP FT VTILSRCLQFHLKHISVDQIHAQLDLVLDKEEVSKDGRALGLIAHAADGSMRDALSLTD FT QAIALGNGNVTADIVSMMLGTLDTDQAIRILEAISTKNMQTLMSCINDLADIGVEWDGL FT AKEIAAQLHKLAMYQALPATLDKTQPDAERIELLSGQLSPQEVQLFYQIALQSRNDLPL FT APTEKTGVEMMLLRMVAFRPVHAQAIEALPIAVPSMEPAAVNVAPQQPAPASRVQQVIA FT SAPNAEVPVAPKPMQPQAVSQTVYSPVSNSQQSSSAPLDSTEAQPPVYDAPPMGESSQS FT DSAPVQNIPQEPIATPRSGLLGVRNQLRSAKNNLSNTTTGTSPKKGSAASDKKKTSSVL FT ERIAEKQHLAPRTQVSQLGTSVSQEKKPEEPYRWKASQPEVKKVVSDITPTKLKQALEH FT EKTPEMVQELVDETVKQDTWSALAMSLALPKLVQQLVLNSSFEEHDDQVSLHLRSAQSH FT LINDKAHELVSQALSSALNKEIKLNIDISAEGTSPLELREQMYQTKLQTAYQSLQQDPH FT VNFFMQRYGAEIDQESVRPI" FT misc_feature 1180218..1180790 FT /gene="dnaX" FT /locus_tag="VSAL_I1085" FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellul, score 1.6e-06" FT /inference="protein motif:HMMPfam:PF00004" FT misc_feature 1180233..1180256 FT /gene="dnaX" FT /locus_tag="VSAL_I1085" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1182334..1182669 FT /transl_table=11 FT /locus_tag="VSAL_I1086" FT /old_locus_tag="TVS0962" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR004401" FT /db_xref="UniProtKB/Swiss-Prot:B6EJ43" FT /protein_id="CAQ78771.1" FT /translation="MFGGKGGMGNLMKQAQQMQDRMQKMQEEIGNMEITGESGAGLVKV FT TITGSHSVRRVEIDPSLMEEDEKEMLEDLIAAAFNDASRRIEETQKERMAGVTGGMQMP FT PGFKMPF" FT misc_feature 1182367..1182645 FT /locus_tag="VSAL_I1086" FT /note="HMMPfam hit to PF02575, Uncharacterised BCR, YbaB FT family COG0718, score 3.1e-51" FT /inference="protein motif:HMMPfam:PF02575" FT CDS 1182772..1183374 FT /transl_table=11 FT /gene="recR" FT /locus_tag="VSAL_I1087" FT /old_locus_tag="TVS0963" FT /product="recombination protein RecR" FT /db_xref="GOA:B6EJ44" FT /db_xref="InterPro:IPR000093" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR015967" FT /db_xref="InterPro:IPR023627" FT /db_xref="InterPro:IPR023628" FT /db_xref="UniProtKB/Swiss-Prot:B6EJ44" FT /protein_id="CAQ78772.1" FT /translation="MRTSGLLEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLAD FT ALSRAMSEIGHCSECRTFTEEDTCAICLNPKRQMNGELCIVESPADIVAVEATGQFSGR FT YFVLMGHLSPLDGIGPSDIGLDLLDHRLGRGDIKEVILATNPTVEGEATAHYIAEICQE FT HHVSASRIAHGVPMGGELELVDGTTLSHSILGRQKLY" FT misc_feature 1182883..1183008 FT /gene="recR" FT /locus_tag="VSAL_I1087" FT /note="HMMPfam hit to PF02132, RecR protein, score 9.6e-18" FT /inference="protein motif:HMMPfam:PF02132" FT misc_feature 1182940..1183002 FT /gene="recR" FT /locus_tag="VSAL_I1087" FT /note="PS01300 RecR protein signature." FT /inference="protein motif:ProSite:PS01300" FT misc_feature 1183012..1183293 FT /gene="recR" FT /locus_tag="VSAL_I1087" FT /note="HMMPfam hit to PF01751, Toprim domain, score FT 1.2e-19" FT /inference="protein motif:HMMPfam:PF01751" FT CDS complement(1183346..1183906) FT /transl_table=11 FT /locus_tag="VSAL_I1088" FT /old_locus_tag="TVS0964" FT /product="integral membrane protein" FT /db_xref="GOA:B6EJ45" FT /db_xref="InterPro:IPR022764" FT /db_xref="InterPro:IPR023826" FT /db_xref="UniProtKB/TrEMBL:B6EJ45" FT /protein_id="CAQ78773.1" FT /translation="MIKLLLPILAVLALAQLNVISGYLVWDKSLIINGELWRLVTGNFT FT HTNLPHLLMNSAALCIFSVIFKDYLNTKKLWGLLLALSVMVGSLLLLSPIERYVGLSGV FT LHGLFVWAAIEDIKHKRYTGWLLLLGVLAKIGWEQLFGASASTISLINASVATDAHLFG FT ALSGGMLQLCVFLVANKASDDPK" FT misc_feature complement(1183370..1183819) FT /locus_tag="VSAL_I1088" FT /note="HMMPfam hit to PF01694, Rhomboid family, score FT 1.2e-06" FT /inference="protein motif:HMMPfam:PF01694" FT misc_feature complement(order(1183373..1183441,1183484..1183543, FT 1183622..1183681,1183709..1183768,1183829..1183897)) FT /locus_tag="VSAL_I1088" FT sig_peptide complement(1183862..1183906) FT /locus_tag="VSAL_I1088" FT CDS join(1183921..1184124,1185181..1185603) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1089" FT /old_locus_tag="TVS0965" FT /product="conserved hypothetical protein (pseudogene)" FT /note="CDS is disrupted by the insertion of an IS element FT after codon 68" FT /db_xref="PSEUDO:CAQ78774.1" FT misc_feature order(1183921..1184124,1185181..1185564) FT /locus_tag="VSAL_I1089" FT /note="HMMPfam hit to PF03942, DTW domain, score 1.3e-48" FT /inference="protein motif:HMMPfam:PF03942" FT repeat_region complement(1184127..1185179) FT /note="VSa7" FT repeat_region complement(1184127..1184156) FT /note="IR of VSa7" FT CDS complement(1184217..1185083) FT /transl_table=11 FT /locus_tag="VSAL_I1090" FT /old_locus_tag="TVS0966" FT /product="transposase" FT /db_xref="GOA:B6EJ47" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:B6EJ47" FT /protein_id="CAQ78775.1" FT /translation="MGYQYKQLTLGERYQIEAWNTHSISAREIGQKLKRSNGSISKELR FT RCPAGSYSAEQAHKHAFQKRTLSIKHTKCSQKNKKIIHLYLQLGWSPEQISGRMRREKI FT ENTICCSTIYNAIKREQWQRMLARKGKKYKQRKGVEAGARLIPNRIDISQRPAIVDDKS FT EVGHWEGDTVYGQDGYLVTMVERVSKLLVTCKVRNKSKKAVTRGINRMMKPFKELCKTI FT TFDNGGEFAGHAKIAKHLNCDIYFAKPYHSWQRGLNENTNGLLRRFFPKRMAIGELTAK FT EINRQSF" FT misc_feature complement(1184229..1184606) FT /locus_tag="VSAL_I1090" FT /note="HMMPfam hit to PF00665, Integrase core domain,score FT 2.8e-14" FT /inference="protein motif:HMMPfam:PF00665" FT misc_feature complement(1184949..1185014) FT /locus_tag="VSAL_I1090" FT /note="Predicted helix-turn-helix motif with score FT 1000.000, SD 2.59 at aa 24-45, sequence FT ISAREIGQKLKRSNGSISKELR" FT repeat_region complement(1185150..1185179) FT /note="IR of VSa7" FT CDS complement(1185629..1186975) FT /transl_table=11 FT /locus_tag="VSAL_I1091" FT /old_locus_tag="TVS0968" FT /product="deoxyguanosinetriphosphate triphosphohydrolase" FT /EC_number="3.1.5.1" FT /db_xref="GOA:B6EJ48" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006261" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR023023" FT /db_xref="InterPro:IPR023279" FT /db_xref="InterPro:IPR023293" FT /db_xref="UniProtKB/Swiss-Prot:B6EJ48" FT /protein_id="CAQ78776.1" FT /translation="MNKTIDITLSPHWEDRISNEQKLRRNDQRSVFQRDRARILHSAAF FT RRLQAKTQVHGPGSANDFYRTRLTHSLEVSQIGTGIVAQLKLRQPEFRHLLTSTSLMES FT ICLAHDIGHPPFGHGGEIALNYMMRNHGGFEGNGQTLRILSKLEPYTEHFGMNLARRTL FT MGVLKYPAFLDQVHSKYRPDDVTNLRHLKSIEWHPPKGIYRDDESILHWITAPLSEADK FT TLFSTFRFQKENDKVHKKTRFKSIDCSIMELADDIAYGIHDLEDAIVMGIVTRNQWQES FT VASKLAECGDEWFEAHINNIGDKLFSGLQYQRKDGIGGMVNALLTSITIQKSTFEEEQS FT FESELLKWNAYLSPSMSYALNILKKFVGQYVIHNSEMQRIEYKGQQIVMEIFDALNSDP FT ERLLPENDKREWREAKESGTNHHRIIADYIAGMTDGYAQRLYNQLFVPI" FT CDS 1187116..1188543 FT /transl_table=11 FT /gene="calB" FT /locus_tag="VSAL_I1092" FT /old_locus_tag="TVS0969" FT /product="coniferyl aldehyde dehydrogenase" FT /EC_number="1.2.1.68" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EJ49" FT /db_xref="InterPro:IPR012394" FT /db_xref="InterPro:IPR015590" FT /db_xref="InterPro:IPR016160" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="InterPro:IPR016163" FT /db_xref="UniProtKB/TrEMBL:B6EJ49" FT /protein_id="CAQ78777.1" FT /translation="MFYLLNGIRKMDDVVKLKSEFTQFQDAYQRNPYPIKEERLGHLST FT LKAALLAEQVAIIDALTADYGFRSKFDSTICDVMPTIQHINYTVKRVPKWLKPEKRKAG FT LLLSPSTLSITYQPLGVVGIIVPWNFPIFLSIAPIVTALAAGNRVMVKLSEYTPETNQV FT LRRVFSSLTEHICVIEGDGNIAAEFSQLPFNHLLFTGSTQIGKLVASSAAKNLTPVTLE FT LGGKSPVIIADDAEISTAVDAIMLGKSINAGQICVAPDYVFIPKDKVDAFIQRYSQRFL FT QAFPEKKGKREYSHIINQTQYDRLTHYSQDAQNKGATIISIGESSNDQGRLFLPQLMTN FT VSDEMLVMQEEIFGPILPIIGYDNVDEAITYIQAHPRPLALYIMSNDKEMIQNIIKQTH FT SGGVAVNDTMMHVAADDAPFGGIGDSGLGSYHGIEGFKTFSHAKTILQTPKWLPRSRLL FT LKHKKWMLKLLSIKFIK" FT misc_feature 1187161..1188450 FT /gene="calB" FT /locus_tag="VSAL_I1092" FT /note="HMMPfam hit to PF00171, Aldehyde dehydrogenase FT family, score 4.4e-50" FT /inference="protein motif:HMMPfam:PF00171" FT misc_feature 1187542..1187586 FT /gene="calB" FT /locus_tag="VSAL_I1092" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature 1187776..1187799 FT /gene="calB" FT /locus_tag="VSAL_I1092" FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT /inference="protein motif:ProSite:PS00687" FT CDS 1188622..1189506 FT /transl_table=11 FT /locus_tag="VSAL_I1093" FT /old_locus_tag="TVS0970" FT /product="integral membrane protein" FT /db_xref="GOA:B6EJ50" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:B6EJ50" FT /protein_id="CAQ78778.1" FT /translation="MSQHQPVQGASWMLTAGLAFAIVNSIAQYLSINFGLPSTMVALVQ FT YAIALVVILPYLRTLGIRNSLRTEYFGMHVIRVSLAVVGIQLWLWALAYPVPIWQGIAL FT LMTSPLFATIGSGLILKEKVGVARWCATLAGFVGAMIILEPWADDFTWATLLPVGAAFF FT WACYSLMVKKMSSKDSPSTMVVYLLILITPFNILLALPEWQVPSDMTMWMLLFGAGVMT FT ALAQWAIVKAYSAADASFVQPFDHAKLPLNVLAGWMVFGWAPPGRLWLGAAIIIASVAF FT ITQWERKKQTVIK" FT sig_peptide 1188622..1188684 FT /locus_tag="VSAL_I1093" FT misc_feature order(1188655..1188711,1188739..1188807,1188844..1188903, FT 1188913..1188981,1188994..1189062,1189075..1189134, FT 1189171..1189224,1189252..1189311,1189423..1189476) FT /locus_tag="VSAL_I1093" FT misc_feature 1188673..1189053 FT /locus_tag="VSAL_I1093" FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 4.9e-05" FT /inference="protein motif:HMMPfam:PF00892" FT misc_feature 1189105..1189473 FT /locus_tag="VSAL_I1093" FT /note="HMMPfam hit to PF00892, Integral membrane protein FT DUF6, score 1.5e-10" FT /inference="protein motif:HMMPfam:PF00892" FT CDS complement(1189612..1190760) FT /transl_table=11 FT /locus_tag="VSAL_I1094" FT /old_locus_tag="TVS0971" FT /product="iron-containing alcohol dehydrogenase" FT /EC_number="1.1.1.-" FT /db_xref="GOA:B6EJ51" FT /db_xref="InterPro:IPR001670" FT /db_xref="UniProtKB/TrEMBL:B6EJ51" FT /experiment="The expressed protein is found to be exported FT (extracellular) by Aliivibrio salmonicida" FT /protein_id="CAQ78779.1" FT /translation="MKFSYVNPTQIHFGQGQIAAIATSIPQDKKVLVIYGGGSIKNNGV FT YDQVVAALVDHSWIEFSGVEPNPTVETLDNAVAIAKAEKIDYILAVGGGSVIDGSKYVA FT AAAKYDGNGWDILIGKHTVTEAIPLGAILTLPATGSESNSGSVITQKSTQTKLPFMAAA FT VQPKFAVLDPDSMKTLPERQLINGLVDAWVHTCEQYLTMPIGAMVQDGYAETLLRNLLT FT LGAQYNNRDNNEWRSNLMWTANQALNGLIGSGVPHDWATHMIGHELTALYHVDHARSLS FT IIQPSLLRNQIEAKRAKLEQMGKNVFGLEASDDLAERTIIAIETFYHSLNSPTELTEHG FT DDKASAIDTIIKQLEAHGMVALGENQAITLDVSRAILEDAVK" FT misc_feature complement(1189657..1190739) FT /locus_tag="VSAL_I1094" FT /note="HMMPfam hit to PF00465, Iron-containing alcohol FT dehydrogenase, score 1.1e-13" FT /inference="protein motif:HMMPfam:PF00465" FT CDS 1190957..1191841 FT /transl_table=11 FT /locus_tag="VSAL_I1095" FT /old_locus_tag="TVS0972" FT /product="transcriptional regulator, AraC-family" FT /db_xref="GOA:B6EJ52" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR009594" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:B6EJ52" FT /protein_id="CAQ78780.1" FT /translation="MKSLGDLMQSYADSYGFNDLEGIRETAVPGVWFYRSSKGNQRQPF FT VYQSGIIVMGRGHKHIHIGNQPVHYGPDDYLVVGVPMPLECEAFPEKGEPLLGLSIDVD FT SALLHRLVSELENANFQVSAHSEQDGFGLISVKMADDMLESCKRLMLALHSDLDTQMLG FT ESLLTEIVYRVLTGPEGHVLFNLAHHDSQYARVAKALNKVHQSYADGLTVQNLAEEANM FT SVSAFHSAFRKVTLESPLQYLKKVRLNKAKELIQLEGRRVNDAAHLVGYTSTSQFSREF FT KRHFNMTPKGSVA" FT misc_feature 1191032..1191505 FT /locus_tag="VSAL_I1095" FT /note="HMMPfam hit to PF06719, AraC-type transcriptional FT regulator N-termin, score 1.2e-55" FT /inference="protein motif:HMMPfam:PF06719" FT misc_feature 1191548..1191688 FT /locus_tag="VSAL_I1095" FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix protei, score 1.1e-07" FT /inference="protein motif:HMMPfam:PF00165" FT misc_feature 1191587..1191652 FT /locus_tag="VSAL_I1095" FT /note="Predicted helix-turn-helix motif with score FT 1279.000, SD 3.54 at aa 212-233, sequence FT LTVQNLAEEANMSVSAFHSAFR" FT misc_feature 1191695..1191823 FT /locus_tag="VSAL_I1095" FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT misc_feature 1191704..1191838 FT /locus_tag="VSAL_I1095" FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix protei, score 2.2e-07" FT /inference="protein motif:HMMPfam:PF00165" FT CDS 1191884..1192417 FT /transl_table=11 FT /locus_tag="VSAL_I1096" FT /old_locus_tag="TVS0973" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EJ53" FT /db_xref="InterPro:IPR002734" FT /db_xref="InterPro:IPR024072" FT /db_xref="UniProtKB/TrEMBL:B6EJ53" FT /protein_id="CAQ78781.1" FT /translation="MSNSVFMATSLDGYIADKNGGIDWLHTIPNQDQNSMGYVEYFDRI FT DAMVMGRNTLDMVLGFGVDWPYSKPVFVLSNTMTSVPAGYEDKIFLVKGPLKEVIKGIN FT EQGFEHLYIDGGVTIQSFLKEDLIDEMIITTIPVLLGGGSPLFGDLNAPLNFKFVKNEV FT FLNAIVQNHFVRER" FT misc_feature 1191896..1192393 FT /locus_tag="VSAL_I1096" FT /note="HMMPfam hit to PF01872, RibD C-terminal domain,score FT 8.8e-09" FT /inference="protein motif:HMMPfam:PF01872" FT CDS complement(1192485..1193699) FT /transl_table=11 FT /locus_tag="VSAL_I1097" FT /old_locus_tag="TVS0974" FT /product="aminotransferase" FT /db_xref="GOA:B6EJ54" FT /db_xref="InterPro:IPR001176" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EJ54" FT /protein_id="CAQ78782.1" FT /translation="MQNIAMSSKLSSVCYDIRGPVLKHAKRMEEEGQKILKLNIGNPAQ FT FGFDAPEEILVDVIKNLPTSQGYGDSKGIYSARKAVVQHYQRRGLLDLDVEDVYIGNGA FT SELIVMAMQALLNNGDEMLVPAPDYPLWTAAVSLSGGNPVHYLCDEGADWYPDLDDIKK FT KITPNTKGIVLINPNNPTGAVYSRDFLLQIVEIARQNNLIIFADEIYDKVLYDGAIHTT FT LATLAPDLLTVTFNGLSKAYRVCGFRGGWMFLNGPKDHAQGYIAGLDMLASMRLCANVP FT MQHAIQTALGGYQSINELLLPGGRLLEQRDKAYELITQIPGVSCVKPKGAMYLFPKLDP FT KMYKIKDDQKFVLDFLIKEKVLLVQGTGFNWPTPDHFRIVTLPRVDDLEVAIGRLERFL FT HTYKQ" FT misc_feature complement(1192515..1193603) FT /locus_tag="VSAL_I1097" FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II, score 3.3e-47" FT /inference="protein motif:HMMPfam:PF00155" FT CDS 1194026..1195348 FT /transl_table=11 FT /gene="menF" FT /locus_tag="VSAL_I1098" FT /old_locus_tag="TVS0976" FT /product="menaquinone-specific isochorismate synthase" FT /EC_number="5.4.4.2" FT /note="Expression may be stress-induced" FT /db_xref="GOA:B6EJ55" FT /db_xref="InterPro:IPR004561" FT /db_xref="InterPro:IPR005801" FT /db_xref="InterPro:IPR015890" FT /db_xref="UniProtKB/TrEMBL:B6EJ55" FT /protein_id="CAQ78783.1" FT /translation="MSTFQDAIESIRHQIAQATSSHTICIDLDWTVGDQLIDWLEAQPI FT YPKFYWQSRDGEEEVAVLGQVKTFTDPKAAQQILAPQQRVWGGRSFDGRTERNRRCMSS FT FFFLPKVEITRLKSSWHFMVNLSDDNSRLLSTLDKLSEQFTPLSELHCRVQQRINTPEK FT EDWSNMVNKALTAISNKQFEKVVLARKTTLTLDQPLSSAQFLKASRKANSHSFHFMMAL FT DSEHCFIGSTPERLYVRNGYALKTEALAGTIGRGHDEEEDDQLASWLISDKKNQYENRL FT VVDDIVNRLSKFSLSMKVAEKSELVKLRKVQHLKRPISAEINQECSDSQLLDNLQPTAA FT IAGLPRMPALDFIIDNEPFARGWYSGAVGFLSQQRSEFCVAIRSALVMGNKLHLFAGAG FT IVPGSEPSSEWDELDRKTSTLCTLLESDITMNPEITESQVA" FT misc_feature 1194509..1195294 FT /gene="menF" FT /locus_tag="VSAL_I1098" FT /note="HMMPfam hit to PF00425, chorismate binding FT enzyme,score 2.2e-75" FT /inference="protein motif:HMMPfam:PF00425" FT CDS 1195345..1197078 FT /transl_table=11 FT /gene="menD" FT /locus_tag="VSAL_I1099" FT /old_locus_tag="TVS0977" FT /product="menaquinone biosynthesis protein MenD" FT /EC_number="4.1.1.71" FT /db_xref="GOA:B6EJ56" FT /db_xref="InterPro:IPR004433" FT /db_xref="InterPro:IPR011766" FT /db_xref="InterPro:IPR012001" FT /db_xref="UniProtKB/TrEMBL:B6EJ56" FT /protein_id="CAQ78784.1" FT /translation="MMQPEQQVMLNQVWAELIIEELVRNGVKHVCIAPGSRSTPLTLAA FT SEHENLSIHTHFDERGLGFLALGIAKASLQPVAVIVTSGTAVANLLPSVVESGLTKEKL FT ILLTADRPVELIDCGANQAINQHNIFSSHVCHSLSLPSPSSNVPAQWVLSRLDQACFTQ FT KEQGGAIHVNCPFPEPFYGKKDETLLLAYLAPIQAWKTTTLPYVEQLTPNYDVAVSPQW FT MEVAQKKGVVIIGKVTLVEAQAAADLGRELGWPVLSDPQSGYCSEWAHYDLWMQNQDCL FT ALLGDVECVLQFGARLVSKRLSAWLSMYDQQYWIVDIHPELLDSTFRQHTRYHASIVDW FT CSAHTERLQGRDCYFDHAPLTQWSESLKVASQNILALTCSMVCHTETLSELSFALTVGQ FT KVNHCDWFIGNSLIVRLLDMVGEINQQSVYTNRGASGIDGLMATAMGVHLSNQNPLLCL FT VGDTSLLYDLNSLALLKQATQPIVVVVLNNDGGGIFDLLPVDEKKKDDFYRMPHHLEFS FT HAAAMFGLTYHKPETLSCAISMINDGLKGGVHLVEINTPSGQAGEELTRLFQTIQHATL FT F" FT misc_feature 1195378..1195836 FT /gene="menD" FT /locus_tag="VSAL_I1099" FT /note="HMMPfam hit to PF02776, Thiamine pyrophosphate FT enzyme, N-termina, score 0.0013" FT /inference="protein motif:HMMPfam:PF02776" FT CDS 1197062..1197856 FT /transl_table=11 FT /locus_tag="VSAL_I1100" FT /old_locus_tag="TVS0978" FT /product="acyl-CoA thioester hydrolase" FT /EC_number="3.1.2.-" FT /db_xref="GOA:B6EJ57" FT /db_xref="InterPro:IPR022485" FT /db_xref="UniProtKB/TrEMBL:B6EJ57" FT /protein_id="CAQ78785.1" FT /translation="MPLYSKLIEPIESTTQPCVVFLHGLLGSIKEWDQIASVIAQSHPV FT LLIDLPGHGKSQSVELEESTGFEQACQLIIEQCHSSPYQEFVLVGYSLGGRLAMYLSAF FT FQLPNDITLRGLCVEGGNFGLISKEEKHIRWQNDTMWAERFEQQPIADVLDNWYQQKVF FT SSLNPEQRQVLVAKRSDNLGLSIGMMLRSTSLAKQPYLLNELHRCTIPMLYICGEAGQK FT FQHLAEQSQLTYQIIAQAGHNAHVEQPERFTHVLNTFLQQWT" FT misc_feature 1197188..1197835 FT /locus_tag="VSAL_I1100" FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase FT fold,score 1.7e-09" FT /inference="protein motif:HMMPfam:PF00561" FT CDS 1197861..1198727 FT /transl_table=11 FT /gene="menB" FT /locus_tag="VSAL_I1101" FT /old_locus_tag="TVS0979" FT /product="naphthoate synthase" FT /EC_number="4.1.3.36" FT /db_xref="GOA:B6EJ58" FT /db_xref="InterPro:IPR001753" FT /db_xref="InterPro:IPR010198" FT /db_xref="InterPro:IPR014748" FT /db_xref="InterPro:IPR018376" FT /db_xref="UniProtKB/TrEMBL:B6EJ58" FT /protein_id="CAQ78786.1" FT /translation="MARTVGISEEELYPPVNWTDCTAQYEDIQYHKSADGIAKITIARP FT QVRNAFRPGTVKEMMDALADARYDEKVGVIVLTGLGEEAFCSGGDQKIRGDYGGYRDDS FT GTHHLNVLDFQRQIRTCPKPVIAAVAGYAVGGGHVLHMMCDLTIAAENAQFGQTGPKVG FT SFDGGWGASYMARIVGQKKAREIWFLCRFYDAQEALDMGLVNTVVPVADLEKETVRWCR FT ETLQHSPMALRCLKAALNADCDGQAGLQELAGNATMMFYMTEEGQEGRNAFNEKRRPDF FT DKFPRNP" FT misc_feature 1197972..1198487 FT /gene="menB" FT /locus_tag="VSAL_I1101" FT /note="HMMPfam hit to PF00378, Enoyl-CoA FT hydratase/isomerase family, score 3.9e-70" FT /inference="protein motif:HMMPfam:PF00378" FT misc_feature 1198164..1198202 FT /gene="menB" FT /locus_tag="VSAL_I1101" FT /note="PS00018 EF-hand calcium-binding domain." FT /inference="protein motif:ProSite:PS00018" FT misc_feature 1198236..1198298 FT /gene="menB" FT /locus_tag="VSAL_I1101" FT /note="PS00166 Enoyl-CoA hydratase/isomerase signature." FT /inference="protein motif:ProSite:PS00166" FT CDS 1198806..1199780 FT /transl_table=11 FT /gene="menC" FT /locus_tag="VSAL_I1102" FT /old_locus_tag="TVS0980" FT /product="O-succinylbenzoate-CoA synthase" FT /EC_number="4.2.1.-" FT /db_xref="GOA:B6EJ59" FT /db_xref="InterPro:IPR001354" FT /db_xref="InterPro:IPR010196" FT /db_xref="InterPro:IPR013342" FT /db_xref="UniProtKB/Swiss-Prot:B6EJ59" FT /protein_id="CAQ78787.1" FT /translation="MKTAKIYQYQLPMDSGVILRDQRLQQRDGLIIELSDGKHTAKGEI FT APLPEFSQENLEQAREDLISLTQAWLNDEVLDVDANCPSVAFGFSMALLELENNLPEVG FT NYQVAPLCSGDPDDLVVKLNEMSGKKVAKIKVGMYEAIRDGMVANMFLELIPDLSLRLD FT ANRGWTPKKAEQFANYVSPQYRSRIEFLEEPCHRPEESLEFSKATGIAIAWDETVRDEG FT FEVKAQDGVAAIVIKPTLVGSVGKCIELVEQAHLLGMQAVISSSIESSLALTQLARLAA FT WKTPNTIPGLDTIDLFKMQLDTPWPHCELPMQALSDLEVIWES" FT CDS 1199768..1201165 FT /transl_table=11 FT /gene="menE" FT /locus_tag="VSAL_I1103" FT /old_locus_tag="TVS0981" FT /product="2-succinylbenzoate--CoA ligase FT (O-succinylbenzoyl-CoA synthetase)" FT /EC_number="6.2.1.26" FT /db_xref="GOA:B6EJ60" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR010192" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:B6EJ60" FT /protein_id="CAQ78788.1" FT /translation="MGKLITPEFTTWPWVKWSETRELEIALRDGDTIWTWAEVSTQINR FT YANGLLQQGVKRDEVVVGISKNCIELVWLQLACVRIGARFASINPKKPECELHQLVTSI FT SASHIWFGKDQKTISGIWHHLQLINAEYGVIAATWQLGRLATLTFTSGSTGLPKAVAHS FT ANNHLHSAAGLLSWMDFDVCDSWLLSLPLFHVSGLAIVWRWLLSGATLVMPTSNGLLHD FT LSSVTHASLVPTQLTQILADDQVSRLALKRVLLGGAVIPPVLTEAAELQGIECWLGYGM FT TEMGSTVTAKRADGHTGVGNVLPYREIKIDHGEVLVRGETLALGYYRSSGIIDIAEDDG FT WFKTKDLGDVSTGELHIKGRADNMFISGGENIHPEKIEQALLLHPMIEQVIVVESVDEQ FT FGYRPVAAVVTTSEIKEEELTYFLSDKLTSYELPIRYELMPKSLLNTGIKISRQKVREW FT VNDLLPA" FT misc_feature 1199870..1200943 FT /gene="menE" FT /locus_tag="VSAL_I1103" FT /note="HMMPfam hit to PF00501, AMP-binding enzyme, score FT 8.7e-65" FT /inference="protein motif:HMMPfam:PF00501" FT misc_feature 1200206..1200241 FT /gene="menE" FT /locus_tag="VSAL_I1103" FT /note="PS00455 Putative AMP-binding domain signature." FT /inference="protein motif:ProSite:PS00455" FT CDS complement(1201191..1201766) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1104" FT /old_locus_tag="TVS0982" FT /product="membrane protein (fragment)" FT /note="Similar to Vibrio fischeri Macrolide-efflux protein FT UniProt:Q5E486 (622 aa) fasta scores: E()=6e-32, 64.740% id FT in 173 aa. CDS is truncated by the insertion of the FT downstream IS element and subsequent recombination events. FT N-terminal part located around 95 kb further upstream" FT /inference="similar to sequence:UniProt:Q5E486" FT misc_feature complement(order(1201239..1201307,1201320..1201388, FT 1201425..1201493,1201551..1201619,1201656..1201715)) FT /locus_tag="VSAL_I1104" FT repeat_region 1201769..1204080 FT /note="VSa2" FT repeat_region 1201769..1201792 FT /note="IR of VSa2" FT CDS 1201850..1202164 FT /transl_table=11 FT /locus_tag="VSAL_I1105" FT /old_locus_tag="TVS0983" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78790.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS join(1202161..1202241,1202241..1202507) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1106" FT /old_locus_tag="TVS0983b" FT /product="transposase (pseudogene)" FT /note="Similar to Pseudoalteromonas haloplanktis Putative FT transposase UniProt:Q3IIG1 (115 aa) fasta scores: FT E()=3.5e-31, 57.4% id in 115 aa. CDS contains a frameshift FT after codon 27" FT /db_xref="PSEUDO:CAQ78791.1" FT /inference="similar to sequence:UniProt:Q3IIG1" FT CDS join(1202579..1203595,1203594..1204050) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1107" FT /old_locus_tag="TVSb0011" FT /product="transposase" FT /note="Similar to Shewanella sp. Transposase IS66 FT UniProt:A1RLT8 (500 aa) fasta scores: E()=5.5e-113, 54.4% FT id in 491 aa. CDS contains a frameshift after codon 339" FT /inference="similar to sequence:UniProt:A1RLT8" FT repeat_region 1204057..1204080 FT /note="IR of VSa2" FT CDS complement(1204083..1206722) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1108" FT /old_locus_tag="TVS0987" FT /product="chitodextrinase (fragment)" FT /EC_number="3.2.1.14" FT /note="Similar to Vibrio furnissii Chitodextrinase FT precursor Endo I UniProt:P96156 (1046 aa) fasta scores: FT E()=0, 76.510% id in 745 aa. CDS is truncated by the FT insertion of the downstream IS element and subsequent FT recombination events. CDS also appears to be truncated at FT the N-terminus. The sequence has been checked and is FT believed to be correct" FT /inference="similar to sequence:UniProt:P96156" FT misc_feature complement(1204083..1204463) FT /locus_tag="VSAL_I1108" FT /note="HMMPfam hit to PF06483, Chitinase C, score 3.2e-59" FT /inference="protein motif:HMMPfam:PF06483" FT misc_feature complement(1204545..1205927) FT /locus_tag="VSAL_I1108" FT /note="HMMPfam hit to PF00704, Glycosyl hydrolases FT family,score 6.5e-106" FT /inference="protein motif:HMMPfam:PF00704" FT misc_feature complement(1205454..1205480) FT /locus_tag="VSAL_I1108" FT /note="PS01095 Chitinases family 18 active site." FT /inference="protein motif:ProSite:PS01095" FT misc_feature complement(1206054..1206290) FT /locus_tag="VSAL_I1108" FT /note="HMMPfam hit to PF00801, PKD domain, score 0.0043" FT /inference="protein motif:HMMPfam:PF00801" FT misc_feature complement(1206072..1206305) FT /locus_tag="VSAL_I1108" FT /note="HMMPfam hit to PF02368, no description, score 0.016" FT /inference="protein motif:HMMPfam:PF02368" FT CDS complement(1206727..1207227) FT /transl_table=11 FT /locus_tag="VSAL_I1109" FT /old_locus_tag="TVSb0012" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR001120" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:B6EJ63" FT /protein_id="CAQ78794.1" FT /translation="MKKKGFTLIELIIVIVVLSILAITAASKFINLQRDSRISALQGLK FT GEMTGAMNQLHPKTILTGVDTQASGSITILGDNIHIVYGYPKADAAKSWNKLMNQVFVD FT SQYNDNIPSEWYFHNDTSKPYITFMHRSKKYSTDKCNIKYSEAVNRLHSFRYMEWCHCL FT QWW" FT misc_RNA complement(1207393..1207492) FT /locus_tag="VSAL_I3160s" FT /product="Bacterial signal recognition particle RNA" FT /note="Bacterial signal recognition particle RNA (RF00169) FT predicted by Rfam, score 89.21" FT CDS 1207732..1208481 FT /transl_table=11 FT /locus_tag="VSAL_I1110" FT /old_locus_tag="TVS0990" FT /product="putative exported protein" FT /note="Expression may be regulated by Fur" FT /db_xref="InterPro:IPR007433" FT /db_xref="UniProtKB/TrEMBL:B6EJ64" FT /protein_id="CAQ78795.1" FT /translation="MFRLTAIASFISALTLFNFSAVAAEEDDVSGEFSGDAKVGFIYSK FT TDETSMSVNSGITLKYKEARWHHTGEFSTYYTKGNEEDDGTNKNKIIYDVKYDITERIF FT AFGNAKYEHDQFATYCEQALLVGGFGANIIDTEHSTLDVGAGPGYRYSKRQVFDDDLPN FT NSEKEMIANFFIEGQSKITDGLEAGGGVRVDYGSSNTTTTTHVFLKNKLMESLSLMLDA FT EYIYNSVVATGKTHDEIYSTLSLNYGF" FT sig_peptide 1207732..1207800 FT /locus_tag="VSAL_I1110" FT misc_feature 1207801..1208478 FT /locus_tag="VSAL_I1110" FT /note="HMMPfam hit to PF04338, Protein of unknown function, FT DUF481, score 2.9e-07" FT /inference="protein motif:HMMPfam:PF04338" FT CDS 1208654..1208992 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1111" FT /old_locus_tag="TVS0991" FT /product="hypothetical protein (fragment)" FT /note="Similar to N-terminal part of Vibrio fischeri FT Sensory box/GGDEF family protein UniProt:Q5E662 (631 aa) FT fasta scores: E()=2.1e-20, 60.000% id in 105 aa. The CDS FT appears to be truncated at the C-terminus. The sequence has FT been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ78796.1" FT /inference="similar to sequence:UniProt:Q5E662" FT CDS complement(1209043..1209696) FT /transl_table=11 FT /gene="vasL" FT /locus_tag="VSAL_I1112" FT /old_locus_tag="TVS0992" FT /product="serine/threonine phosphoprotein phosphatase" FT /EC_number="3.1.3.16" FT /note="Similar to Pseudomonas aeruginosa Serine/threonine FT phosphoprotein phosphatase Stp1 UniProt:Q9I355 (242 aa) FT fasta scores: E()=6.2e-18, 36.283% id in 226 aa. The CDS FT appears to have a 16 amino acid residue deletion after FT codon 133 compared with Pseudomonas aeruginosa Stp1" FT /db_xref="GOA:B6EJ66" FT /db_xref="InterPro:IPR001932" FT /db_xref="InterPro:IPR015655" FT /db_xref="UniProtKB/TrEMBL:B6EJ66" FT /inference="similar to sequence:UniProt:Q9I355" FT /protein_id="CAQ78797.1" FT /translation="MAYFSAEGKVRDKNEDSILSLTEQGIWVVADGMGGYEHGEIASGM FT ITDSFKTEQLHGTLEQKITKAKRMLLKVNHHLSQEKTLSRSRIIGSTVCMLIAHHGHMA FT CLWAGDSRCYLFRHKRLYQISKDHTQEQNGKEALTQAIGMGNNLQIEHCIIPLQHQDTF FT LLTSDGVHKYLSNAMIEACMALPSTLKGCYHLKEQVLLTPANDNLSAIMIKVYR" FT CDS complement(join(1209711..1210775,1210775..1211263, FT 1211267..1213231)) FT /pseudo FT /transl_table=11 FT /gene="vasK" FT /locus_tag="VSAL_I1113" FT /old_locus_tag="TVS0993" FT /product="putative type VI secretion protein VasK FT (pseudogene)" FT /note="Similar to Vibrio cholerae IcmF-related protein FT UniProt:Q9KN45 (1181 aa) fasta scores: E()=4.6e-20,27.362% FT id in 307 aa. CDS contains a nonsense mutation (TAA) after FT codon 655. It also contains a frameshift after codon 818. FT The sequence has been checked and is believed to be FT correct" FT /db_xref="PSEUDO:CAQ78798.1" FT /inference="similar to sequence:UniProt:Q9KN45" FT misc_feature complement(1210143..1210514) FT /gene="vasK" FT /locus_tag="VSAL_I1113" FT /note="HMMPfam hit to PF06744, Protein of unknown function FT (DUF1215), score 2.9e-30" FT /inference="protein motif:HMMPfam:PF06744" FT misc_feature complement(order(1210844..1211263,1211267..1211728)) FT /gene="vasK" FT /locus_tag="VSAL_I1113" FT /note="HMMPfam hit to PF06761, ImcF-related, score 7.9e-73" FT /inference="protein motif:HMMPfam:PF06761" FT misc_feature complement(1212767..1212790) FT /gene="vasK" FT /locus_tag="VSAL_I1113" FT /note="PS00687 Aldehyde dehydrogenases glutamic acid active FT site." FT /inference="protein motif:ProSite:PS00687" FT misc_feature complement(1212797..1212820) FT /gene="vasK" FT /locus_tag="VSAL_I1113" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1213243..1214070) FT /transl_table=11 FT /gene="vasF" FT /locus_tag="VSAL_I1114" FT /old_locus_tag="TVS0996" FT /product="putative type VI secretion protein VasF" FT /db_xref="InterPro:IPR017732" FT /db_xref="UniProtKB/TrEMBL:B6EJ68" FT /protein_id="CAQ78799.1" FT /translation="MSSMDDRTVLITQDPNQVSPTLTQSPNAPKFDQLQNRMVYAARIK FT PEEYNFAGNNPLISAASSLLCITCDLKKETYQDIDLLKPKLVEEIKSFEFQALNSGVEN FT NYVALSRYLLCSFIDEVVVTTPWGAESHWASQSMLSSFHNETYGGEKFFLLLEKLSRNP FT AKYLELLELMYLCLSLGFEGKYRVLSRGLIELDAIRDSLYRQIRSLRGDEKSSLSPNWE FT PKQVQRHKLTRQTSWVGIVCVVLFSLCAIYGGFYYVLDQQSAHVIQAFEHIEL" FT misc_feature complement(1213294..1213362) FT /gene="vasF" FT /locus_tag="VSAL_I1114" FT CDS complement(1214072..1215394) FT /transl_table=11 FT /gene="vasE" FT /locus_tag="VSAL_I1115" FT /old_locus_tag="TVS0997" FT /product="putative type VI secretion protein VasE" FT /db_xref="InterPro:IPR010263" FT /db_xref="UniProtKB/TrEMBL:B6EJ69" FT /protein_id="CAQ78800.1" FT /translation="MQKVIWNEGMLLRPQHFQQNDRYYNHQLQTRTQQQHRFNWGFHSL FT SFDNHHLSVGKIVINQASGILPDGSLFDIQHQATPIIWESDEPKTNLTLYLALSLSTVN FT SPEARSDKEAGINTRYLSYDLTIADNNAQIQNLQTISCGELDFHIITEEELDNHWVKLK FT LCEIKQVTPEGAIQLNQNFEASFINGQHSSLVHRSLREVLTLVTHKADILAERITQSGH FT ATSEIGDFLLLQLLNKYEPQLHYLNQCNQYHPEELYLLLATLQGELATYDSAQRRAELS FT LAYNHKEQGDSFERLLFRLRKQLNQSLKQNAFEIPLQKRNHGVLIAPISDTSLLQEASF FT ILAARSHTDAETLRKQLPPQLKVGPVEKIRNLVNLQLPGITCRSLSVAPRQVPFHGDYC FT YFTLDLNANDRSQLTQSGGFAFHIAGDFPELSLFFWAIRNK" FT misc_feature complement(1214078..1215391) FT /gene="vasE" FT /locus_tag="VSAL_I1115" FT /note="HMMPfam hit to PF05936, Bacterial protein of unknown FT function (DUF87, score 6.8e-161" FT /inference="protein motif:HMMPfam:PF05936" FT CDS complement(1215406..1215894) FT /transl_table=11 FT /gene="vasD" FT /locus_tag="VSAL_I1116" FT /old_locus_tag="TVS0998" FT /product="putative type VI secretion protein VasD" FT /db_xref="InterPro:IPR017734" FT /db_xref="UniProtKB/TrEMBL:B6EJ70" FT /protein_id="CAQ78801.1" FT /translation="MKSLFALLTILMFSGCSNTPEPTYVALTLNASANLNPDHVDRPSP FT LVIRIIELSSITSLENAEFFDLYNNAKANLGPDFIAEEEIILRPGDKKIIKLKLSEKGQ FT YLAVIGAYQNIESADWRYIYTVEPEEAQKIELIATDTSIVKLERVKKKNTTPANNSHI" FT sig_peptide complement(1215838..1215894) FT /gene="vasD" FT /locus_tag="VSAL_I1116" FT misc_feature complement(1215847..1215879) FT /gene="vasD" FT /locus_tag="VSAL_I1116" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1215928..1217289) FT /transl_table=11 FT /gene="vasC" FT /locus_tag="VSAL_I1117" FT /old_locus_tag="TVS0999" FT /product="putative type VI secretion protein VasC" FT /db_xref="InterPro:IPR000253" FT /db_xref="InterPro:IPR008984" FT /db_xref="InterPro:IPR017735" FT /db_xref="UniProtKB/TrEMBL:B6EJ71" FT /protein_id="CAQ78802.1" FT /translation="MMITDLLAIRHHKNKQLSFQRRNKMELAFDIIQSQDLPIDTLPTF FT TFKKAGGTIGRSPNSDWYIADNKRQLSNVHVSISYENDQFFISDSSTNGTYLDGQEASL FT NNGELHPVSHGDIYELGLIKIRARLLQDPENYISPSQNTLDSSSNDEQSVFNMIPDDSF FT LSNAPIEELLNTDEDIILKQIEDAVPAQSQMDDTLLKEQFISPVLYDDFDEENDAASYT FT GEEQIIEDPIFSTQTRSTDNPIPESKEKTIEKENTAEQSQAYLAALSKGLGIELTNLED FT PEQTLFDVGSALRSSINGIQQLLRTRTEIKNKLTANATTIQAQGNNPIKFSHDVNDALN FT VIIHHKPGYLQGIEAINQSCKDIQANQLAIHDACQHTLDALIEKLSPQTLTYRFVQDGI FT QTKFTKPDALYWQAYKKLHEQISHDSDWRNALLEQDFAKQYESQLQMLSAALRV" FT misc_feature complement(1216927..1217136) FT /gene="vasC" FT /locus_tag="VSAL_I1117" FT /note="HMMPfam hit to PF00498, FHA domain, score 8.2e-10" FT /inference="protein motif:HMMPfam:PF00498" FT CDS complement(join(1217350..1217874,1217874..1218872)) FT /pseudo FT /transl_table=11 FT /gene="vasH" FT /locus_tag="VSAL_I1118" FT /old_locus_tag="TVS1000" FT /product="transcriptional regulatory protein, Fis family FT (pseudogene)" FT /note="Similar to Vibrio fischeri Transcriptional regulator FT UniProt:Q5E653 (522 aa) fasta scores: E()=4.1e-137, 72.189% FT id in 507 aa. CDS contains a frameshift after codon 333. FT The sequence has been checked and is believed to be FT correct" FT /db_xref="PSEUDO:CAQ78803.1" FT /inference="similar to sequence:UniProt:Q5E653" FT misc_feature complement(1217380..1217502) FT /gene="vasH" FT /locus_tag="VSAL_I1118" FT /note="HMMPfam hit to PF02954, Bacterial regulatory FT protein, Fis family, score 6.4e-07" FT /inference="protein motif:HMMPfam:PF02954" FT misc_feature complement(1217650..1217679) FT /gene="vasH" FT /locus_tag="VSAL_I1118" FT /note="PS00688 Sigma-54 interaction domain C-terminal part FT signature." FT /inference="protein motif:ProSite:PS00688" FT misc_feature complement(order(1217653..1217874,1217874..1218317)) FT /gene="vasH" FT /locus_tag="VSAL_I1118" FT /note="HMMPfam hit to PF00158, Sigma-54 interaction domain, FT score 6.5e-120" FT /inference="protein motif:HMMPfam:PF00158" FT misc_feature complement(1218012..1218059) FT /gene="vasH" FT /locus_tag="VSAL_I1118" FT /note="PS00676 Sigma-54 interaction domain ATP-binding FT region B signature." FT /inference="protein motif:ProSite:PS00676" FT misc_feature complement(1218204..1218245) FT /gene="vasH" FT /locus_tag="VSAL_I1118" FT /note="PS00675 Sigma-54 interaction domain ATP-binding FT region A signature." FT /inference="protein motif:ProSite:PS00675" FT CDS complement(1218905..1221523) FT /transl_table=11 FT /gene="vasG" FT /locus_tag="VSAL_I1119" FT /old_locus_tag="TVS1002" FT /product="chaperone ClpB" FT /db_xref="GOA:B6EJ73" FT /db_xref="InterPro:IPR001270" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR013093" FT /db_xref="InterPro:IPR017729" FT /db_xref="InterPro:IPR018368" FT /db_xref="InterPro:IPR019489" FT /db_xref="InterPro:IPR023150" FT /db_xref="UniProtKB/TrEMBL:B6EJ73" FT /protein_id="CAQ78804.1" FT /translation="MINVELPQLIKTLDKESHLALEQAAQLCVTRGGHEVLCEDFILAA FT LNNPQSFWNKACIQYEVSTENLIEALQHGRQSRSSESNNPVISTALIEWLQESYLYSML FT EMKLSEILSANLLLTLLAHPNKYGHTPYYRELSVIPLTDLKQQVEGLINSVTENKTVNH FT EHQDALSAYTTNYTQLAKDNKIDPVLCRDSEIRQMIDILARRRKNNPMIVGEAGVGKTA FT LVEGLAIKIAQGEVPDILENVSLLSLDLGLLQAGASIKGEFERRLNLVIKAVQQSLTPI FT ILFIDEAHTLIGAGGQAGSNDAANLLKPALARGELRTIGATTWSEYKKYIEKDPALARR FT FQPIKVDEPTVSQAITILRGLADKYEESHGVYVRDDAIVAAAELSARYITGRQLPDKAI FT DLLDTACARVKINLKAKPQPLEALFHIIAITQRELNCVLRDKQAGIHIDEKHIYDLENK FT LQETQSKAQHLEHDWLNQKELAEALLTSRINVAQCDDSQECEQLLSIQKETYHALMKAQ FT SNQVLVSYETCPSLVAEVISHWTGIPMSTLLRGQASQVLTLHTQLKQQIKGQDQAIIAL FT QKAIQATAAGLNNPNAPTGVFLFVGPSGVGKTQTALAIADLMYGGEQFLTTINMSEFQE FT KHTVSRLIGSPPGYVGYGEGGVLTEAVRQRPYSVILLDEVEKADSEVMNLFYQVFDKGV FT VNDGEGREINFKQTLIIMTSNLASEHIESLCNQDELPSVESLTKAIRPILNQYFKPALV FT ARMNIVPFYPLDLESMEALVDIRMQQLSQQLQKQRIALYYDAHIISHIAKSCTLTETGA FT RNIDAIINGQLKPAFSSQILLALAQKEPLKAISVNIDEDGQVYCQFEQHGTGEEDVCLP FT N" FT misc_feature complement(1219232..1219738) FT /gene="vasG" FT /locus_tag="VSAL_I1119" FT /note="HMMPfam hit to PF07728, ATPase family associated FT with various cellul, score 1.7e-05" FT /inference="protein motif:HMMPfam:PF07728" FT misc_feature complement(1219247..1219750) FT /gene="vasG" FT /locus_tag="VSAL_I1119" FT /note="HMMPfam hit to PF07724, ATPase family associated FT with various cellul, score 1.4e-84" FT /inference="protein motif:HMMPfam:PF07724" FT misc_feature complement(1219700..1219723) FT /gene="vasG" FT /locus_tag="VSAL_I1119" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(1220039..1220104) FT /gene="vasG" FT /locus_tag="VSAL_I1119" FT /note="Predicted helix-turn-helix motif with score 977.000, FT SD 2.51 at aa 474-495, sequence LNQKELAEALLTSRINVAQCDD" FT misc_feature complement(1220315..1220899) FT /gene="vasG" FT /locus_tag="VSAL_I1119" FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellul, score 1.8e-10" FT /inference="protein motif:HMMPfam:PF00004" FT misc_feature complement(1220582..1220620) FT /gene="vasG" FT /locus_tag="VSAL_I1119" FT /note="PS00870 Chaperonins clpA/B signature 1." FT /inference="protein motif:ProSite:PS00870" FT misc_feature complement(1220861..1220884) FT /gene="vasG" FT /locus_tag="VSAL_I1119" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1221520..1222449) FT /transl_table=11 FT /gene="vasG" FT /locus_tag="VSAL_I1120" FT /old_locus_tag="TVS1003" FT /product="putative type VI secretion protein VasG" FT /note="Possible alternative translational start site 99 FT nucleotides upstream present start" FT /db_xref="InterPro:IPR010732" FT /db_xref="UniProtKB/TrEMBL:B6EJ74" FT /protein_id="CAQ78805.1" FT /translation="MKALDHVCHQLIQYHPWSYDEAYDRIQFIANPSQGFAPREIQTVT FT VLMQDDGLPKVLLTLNMLSLIGASSPLPHYYNDYLQQDENNIIKPFLDIFHHRLHRLIR FT SVWQKYRYNAAFRKGANDPFSQHIFALLGLKSEELRDDDSINWSRLFPYLGLLSQRVRS FT ANTIEGLLRYYFQHPNIHIEECILRHCKIPNQQQCTLGNTNSLLGADVVLGDSTPDRAN FT KFRIHITELTWDHFHSFLTNKPNWITLNRLVRFTVKDPLDFDIQLHLKNDEPRPLTLSE FT SNECCLGWTSWLGSKPNEGRITLSGKTL" FT misc_feature complement(1221565..1222428) FT /gene="vasG" FT /locus_tag="VSAL_I1120" FT /note="HMMPfam hit to PF06996, Protein of unknown function FT (DUF1305), score 1.7e-80" FT /inference="protein motif:HMMPfam:PF06996" FT CDS complement(1222512..1224263) FT /transl_table=11 FT /gene="vasA" FT /locus_tag="VSAL_I1121" FT /old_locus_tag="TVS1004" FT /product="putative type VI secretion protein VasA" FT /db_xref="InterPro:IPR010272" FT /db_xref="UniProtKB/TrEMBL:B6EJ75" FT /protein_id="CAQ78806.1" FT /translation="MSFNTYYQTELAALRELGKSFSEENPALAPFLGQEGLDPDIERLF FT EGFAFLVGRLHQRLDNQLPELTHSLMRLLWPNYVQAIPAMSTLKFTPNAEATQCSTIPR FT GTKVKSQLIDGVHCQFKTCYDVELYPISLHSSSFTANGNGGIYQLRLELPTGVELHSLN FT MNKLKIHFNGDKASSLSLIMALCSSTTQAEFCALNSDNELINRSTFPTKSIKSVGFSSQ FT EALYDYPLNTFEGYRHIQEFFCYPEKYYYIDLTELPVWPAQFSQGCKFIDIKFTLAHIT FT QQPFYATRIQPALFCTPIVNLFTTDTQPILLSHRKDQYKVTPSSLSDSSSTILSVEEVH FT GWTPGQKGRINFYHFESFEHNDTNKHANYYSIKQEKNIVNGHFDTYLSFRSLNTFSNNI FT TVSISVTACNGQLAQRLSVGSITHATEQTTGSATFSNIRAVTPCYTPPIEKDGLWSLIS FT NMSLNYLSLTKPEAFKRILLAYDFAGQQDDSRRKKHRRLIDGIKHITTKPSDMLYEGAP FT VRAMNTQLSLNSKHFLCEGELYLFSSVINEFLSLYTSMNSFNQLNVTSTYGGDYSWQPR FT MGQQPLI" FT misc_feature complement(1222515..1224263) FT /gene="vasA" FT /locus_tag="VSAL_I1121" FT /note="HMMPfam hit to PF05947, Bacterial protein of unknown FT function (DUF87, score 2.5e-108" FT /inference="protein motif:HMMPfam:PF05947" FT misc_feature complement(1224204..1224227) FT /gene="vasA" FT /locus_tag="VSAL_I1121" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1224260..1224685) FT /transl_table=11 FT /gene="vasS" FT /locus_tag="VSAL_I1122" FT /old_locus_tag="TVS1005" FT /product="putative type VI secretion protein VasS" FT /db_xref="GOA:B6EJ76" FT /db_xref="InterPro:IPR007048" FT /db_xref="InterPro:IPR015801" FT /db_xref="InterPro:IPR017737" FT /db_xref="UniProtKB/TrEMBL:B6EJ76" FT /protein_id="CAQ78807.1" FT /translation="MLKQRLFERLLAGNVSMNTSVSVMILTESIKNHVTQLLSTRQGDA FT KIRPDLGLPDLNISHMTPHDAILHIKREVERVISQYETRIINTKVNYLGNINSPIHLYF FT EINGDILLNNQLTPISFNTYAQKVNTKPYNYEIQGLA" FT misc_feature complement(1224302..1224676) FT /gene="vasS" FT /locus_tag="VSAL_I1122" FT /note="HMMPfam hit to PF07025, Protein of unknown function FT (DUF1316), score 1.4e-20" FT /inference="protein motif:HMMPfam:PF07025" FT CDS complement(1224773..1226248) FT /transl_table=11 FT /gene="vasR" FT /locus_tag="VSAL_I1123" FT /old_locus_tag="TVS1006" FT /product="putative type VI secretion protein VasR" FT /db_xref="InterPro:IPR010269" FT /db_xref="UniProtKB/TrEMBL:B6EJ77" FT /protein_id="CAQ78808.1" FT /translation="MSETSTAQEIQKETTIGLLDQIVAQTNLTPEDETYGIAKRGVSAF FT IQELLKPHNQSEPVKKALIDKMITEIDQRLSTQVDEILHHSSFQQLESAWRGLKLLVDR FT TDFRENTKIEIINISKKDLLEDFEDASDITQSGLYKHVYTNEFGTFGGQPVGAIIGNYD FT FGPSAPDIKNLQNVAAVAAMAHAPFISAAGPKFFGLDSFEGLPDLKDLNDHFESPQYAK FT WQSFRDQEDARYVGLTLPRFLLRQPYDPEENPVKTFNYHENVSATHEDYLWGNTAFTMA FT SRVTESFANFRWCPNIIGPQSGGTVEDLPLHHFDSMGDIETKIPTEVLVSDRREFELAE FT EGFIALTMRKGSDNAAFFSANSVQKAKLFGNSEEGKSAELNYRLGTQLPYLFIISRLAH FT YIKVLQREQIGSWKEPTDLERELNTWIRQYITDQENPPAEVRSRRPLRAASIEVIDVEG FT SPGWYKVNLSVRPHFKYMGSDFTLSLVGKLDQE" FT misc_feature complement(1224779..1226191) FT /gene="vasR" FT /locus_tag="VSAL_I1123" FT /note="HMMPfam hit to PF05943, Protein of unknown function FT (DUF877), score 0" FT /inference="protein motif:HMMPfam:PF05943" FT misc_feature complement(1225118..1225141) FT /gene="vasR" FT /locus_tag="VSAL_I1123" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1226252..1226746) FT /transl_table=11 FT /gene="vasQ" FT /locus_tag="VSAL_I1124" FT /old_locus_tag="TVS1007" FT /product="putative type VI secretion protein VasQ" FT /db_xref="InterPro:IPR008312" FT /db_xref="UniProtKB/TrEMBL:B6EJ78" FT /protein_id="CAQ78809.1" FT /translation="MSKDGSVAPKERINVTFKPSSGDAAEALELPLKMMVLGDFTLQQD FT DRKLEDRKPLNIDKSNFNDVIEKQDLNIEFGVKNRLQDDENEEIPVNLSFKNMTDFDPS FT SIVEQVPELKGLMDLREALVSLKGPLGNVPAFRKAIEDALVNDEAREKLLSELGLVTEK FT E" FT misc_feature complement(1226267..1226743) FT /gene="vasQ" FT /locus_tag="VSAL_I1124" FT /note="HMMPfam hit to PF05591, Protein of unknown function FT (DUF770), score 7.5e-64" FT /inference="protein motif:HMMPfam:PF05591" FT CDS complement(1226761..1228302) FT /transl_table=11 FT /gene="vasJ" FT /locus_tag="VSAL_I1125" FT /old_locus_tag="TVS1008" FT /product="putative type VI secretion protein VasJ" FT /note="Weakly similar to Vibrio cholerae vasJ. Expression FT may be regulated by Fur" FT /db_xref="InterPro:IPR010657" FT /db_xref="InterPro:IPR017739" FT /db_xref="UniProtKB/TrEMBL:B6EJ79" FT /protein_id="CAQ78810.1" FT /translation="MCTYKTILSDLSGENHFGIDLSYETEFESIEKEVVKSTDIFATTK FT TDWSEVRSNSLNLLQYKSKDYRLLHWLLLSIKKENDHNTFIIILPIINQFFIKYSTTIY FT PLREKQLYSTINKIIVIIDDIVKSIIDNSIDTNASNNLIALLSILDITIDESFNANTDN FT LYLTINKLSINIKRISSEKKEGSTSSSPLINNEAIKSIASVSFSIDPITNDRDANKAFR FT HLQDIARNLSKFWLTQRINNEKAYQLNRTLTWLHIIQLPASNDEKITMLKPIPQTRLQY FT FIKLKNESDHETLLLEIEESLSKSPFWIDGHLIAWESLIALNHPEAAQIILEQMALLIK FT KIPEIITLKFDDGTEFASNSAKNWIAEHCTSAAPSQIAANTYNEISDGTDWEDALQAAQ FT SVLTTDNLSDAILPLITGHNQCRSDREVFFWKFSQAKLLYQAHKFDLVCALTSWLDSRY FT SHSILIHWDPVLEERLLELWLSSQNKLPNKEQDTHLMNTLRERLCCLNPMRVLNF" FT misc_feature complement(1227979..1228164) FT /gene="vasJ" FT /locus_tag="VSAL_I1125" FT /note="HMMPfam hit to PF06812, ImpA-related FT N-terminal,score 0.00014" FT /inference="protein motif:HMMPfam:PF06812" FT CDS complement(1228554..1228763) FT /transl_table=11 FT /locus_tag="VSAL_I1126" FT /old_locus_tag="TVS1009" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR019630" FT /db_xref="UniProtKB/TrEMBL:B6EJ80" FT /protein_id="CAQ78811.1" FT /translation="MTNLKANKKNTIETLISESHDIKSPSPLDNAPDEIKLAVDLIYLL FT ENNNVNKEIAIKALDIVLNDLRKK" FT CDS complement(1228750..1229310) FT /transl_table=11 FT /locus_tag="VSAL_I1127" FT /old_locus_tag="TVS1010" FT /product="primosomal replication protein N''" FT /db_xref="InterPro:IPR010890" FT /db_xref="UniProtKB/TrEMBL:B6EJ81" FT /protein_id="CAQ78812.1" FT /translation="MMANYKTIEIMLEQLAKTSAEIDRRRGEQRLPLFDERLFGCRSRY FT LIPCINETKATLQSIQREEKANMLTPQRAEYLTQMLLAQIEAIQREIATQRIRSHEVRP FT KGSNKKPISDMYQDLAQHQEWSRRLIQMVQEQEQNVNKCHSFSQQQELQKVLLTTEKRL FT QRCKTAMIRLEQQITYREQNDQS" FT misc_feature complement(1228765..1229298) FT /locus_tag="VSAL_I1127" FT /note="HMMPfam hit to PF07445, Primosomal replication FT protein priB and pri, score 3.3e-72" FT /inference="protein motif:HMMPfam:PF07445" FT CDS complement(1229341..1230111) FT /transl_table=11 FT /locus_tag="VSAL_I1128" FT /old_locus_tag="TVS1011" FT /product="membrane protein" FT /db_xref="GOA:B6EJ82" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:B6EJ82" FT /protein_id="CAQ78813.1" FT /translation="MEFLEPSTLIILGLVAFVAGFIDAVAGGGGMLTVPALLSIGLPPH FT IALGTNKLAATFASSTAAITYFKKKLFDPQFWKASFIATLLGATCGTLLVNYISTEWLE FT KGLPLIILGAAIYTIWPNRLISEQNQLPEKTPKFKKQQIIQGLSLGFYDGVAGPGTGAF FT WTVSSMALYRLNILLASGLAKAMNFTSNITSLVTFAILGQINWALGLTMGICLMVGAFL FT GAHSAIRFGSKFIRPVFVTVVCILAAKLAFDAWF" FT misc_feature complement(order(1229356..1229409,1229452..1229520, FT 1229581..1229649,1229818..1229886,1230016..1230084)) FT /locus_tag="VSAL_I1128" FT misc_feature complement(1229359..1230084) FT /locus_tag="VSAL_I1128" FT /note="HMMPfam hit to PF01925, Domain of unknown function FT DUF81, score 5.5e-32" FT /inference="protein motif:HMMPfam:PF01925" FT CDS complement(1230178..1232262) FT /transl_table=11 FT /locus_tag="VSAL_I1129" FT /old_locus_tag="TVS1012" FT /product="probable ATP-dependent DNA helicase DinG" FT /EC_number="3.6.1.-" FT /db_xref="GOA:B6EJ83" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR006555" FT /db_xref="InterPro:IPR010614" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014013" FT /db_xref="UniProtKB/TrEMBL:B6EJ83" FT /protein_id="CAQ78814.1" FT /translation="MLNKAVTDSIRESYKTLQDQLPGFIPRRAQNYLVAEIAKSLGGEY FT SDHHRMIVAEAGTGIGKSLAYLLSVIPFAKLNNKKVVISTATVALQEQLAHKDLPFYRR FT ISPLPFSFIIAKGRQRYCCSHKLASLVENNSNDTQQVSLFTEKPKKKDLDLLKRMYKAL FT SEGKWDGDIDNWPSTIPNPIWQTIVADKYSCHNGLPLHRECSFQKAREHLDKADVVIAN FT HSLVMADIDLGGGVVLSEPEQTIYIFDEAHHLPNVAREHSSAAASLKGSATWLEALNKS FT ISKFCNLADQKRVHRFQNNLHEYVQELIPSLNQLSKQFDPSLFNDDGIYRFEHGEIPVW FT LAEQSKDLKDLSTKANQALAKISDLISERMKDGELAPRMAEPALAEMGFYLQRLENLAQ FT VWFLMAKPNSDKGAPLARWLEKSKERDLDVIINVSPLEVGWQLDQNLWSRAAGAVLVSA FT TMRALNSYSFFCKQAGISEKPEDGIRFLSLASPFNYQENAQLVVPKLPMEPSAAGFTDL FT LIEELPFYLADQKSSLVLFSSYWQMNKVAEALEALVKKQGWSLLIQGKESRQEILKKHK FT ALCEVNKISILFGTGSFSEGLDLPGNLLTNLIITKIPFGVPTSPVEEAHSEYIESRGGN FT PFMQISVPEASKKLIQSVGRLLRKEDDSGRIVLLDRRIITKRYGKALLDALPPFKRVIE FT " FT misc_feature complement(1232074..1232097) FT /locus_tag="VSAL_I1129" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS join(1232777..1232971,1232975..1233793) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1130" FT /old_locus_tag="TVS1013" FT /product="putative outer membrane protein (pseudogene)" FT /note="Similar to Photobacterium damselae Porin-like FT protein P OmpP UniProt:Q71QD4 (338 aa) fasta scores: FT E()=2e-06, 28.013% id in 307 aa. CDS contains a nonsense FT mutation (TAA) after codon 65. The sequence has been FT checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ78815.1" FT /inference="similar to sequence:UniProt:Q71QD4" FT CDS 1233860..1234483 FT /transl_table=11 FT /locus_tag="VSAL_I1131" FT /old_locus_tag="TVS1015" FT /product="putative exported protein" FT /db_xref="InterPro:IPR018635" FT /db_xref="UniProtKB/TrEMBL:B6EJ85" FT /protein_id="CAQ78816.1" FT /translation="MKKILVICSLLFCSNLCAASIEPASGIHLRALNGEGVDDSKSILL FT INGDNQLVLDFTGRLKISGKRDHISTVPYIVIVNPKDIDRLEVQLVSQDLDKIKNKIDR FT NKPIFEFLGNGKKIDVIQFILPPNTDVFPYANIPEVVRSYNQKNGLIFDSGKIRELKKE FT LKAVNQSSNSGNSESENSLQLKLWYSRATEYERRAFQKWIIDHN" FT sig_peptide 1233860..1233916 FT /locus_tag="VSAL_I1131" FT CDS 1234971..1235969 FT /transl_table=11 FT /locus_tag="VSAL_I1132" FT /old_locus_tag="TVS1017" FT /product="putative outer membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EJ86" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ78817.1" FT /translation="MKKTLLALAIASISTSAFAVDTSSQNSRNEDMFAFDSMHKDQFSV FT SGSVGVGGYYDTGSKAFYDHWATGLTLAVNYRNNRIVGYFETDFMLNYTTDSETKSASS FT TEKNSSPATDVDKAWLGFDTGYGIASYGWENDTALDAVDGAGDFTYEFGASAGDASDAF FT NVVKFQGSTSGFAYGVSYFETDDVHVDAEKGVNGYVGIEQETFNVYAGYETRDSDYDVY FT TVTGNVTLGEVKLGANFWIEETDTTAKDMTNTGYYVSAGYAVSEDLTLAAGYAANTEEE FT KKVDTDYSYVNVAAMYTLAKNMNMGIDVRQDLDAGTKDEETYVFAAGYYYF" FT sig_peptide 1234971..1235027 FT /locus_tag="VSAL_I1132" FT CDS 1236478..1237374 FT /transl_table=11 FT /gene="hisG" FT /locus_tag="VSAL_I1133" FT /old_locus_tag="TVS1018" FT /product="ATP phosphoribosyltransferase" FT /EC_number="2.4.2.17" FT /db_xref="GOA:B6EJ87" FT /db_xref="InterPro:IPR001348" FT /db_xref="InterPro:IPR011322" FT /db_xref="InterPro:IPR013115" FT /db_xref="InterPro:IPR013820" FT /db_xref="InterPro:IPR015867" FT /db_xref="InterPro:IPR018198" FT /db_xref="InterPro:IPR020621" FT /db_xref="UniProtKB/Swiss-Prot:B6EJ87" FT /protein_id="CAQ78818.1" FT /translation="MSAQRLRIAIQKKGRLSKECQELFKRCGMKFNISGERLVVHSENM FT PIDLLLVRDDDIPSLIMDGVVDLGVIGENELEEVRLERKALGEPSAFTTLRRLDFGGCR FT LSIAIDKDAVYNGPQDLAGKRIATTYSQLLKSFMDEKNIPFSTCILNGSVEVAPRAGLS FT DAIADLVSTGATLEANGLKEAEVIFRSKATLIQREGEFDADKAALIDKLLTRMQGCIQA FT KESKYIMLHAPTDKLEAIKSLLPGAEDPTVLPLSSDGAKVAVHLVSTENLFWETMEQLK FT ALGASSILVLPIEKMME" FT misc_feature 1236631..1237137 FT /gene="hisG" FT /locus_tag="VSAL_I1133" FT /note="HMMPfam hit to PF01634, ATP FT phosphoribosyltransferase, score 5.6e-64" FT /inference="protein motif:HMMPfam:PF01634" FT misc_feature 1236940..1237005 FT /gene="hisG" FT /locus_tag="VSAL_I1133" FT /note="PS01316 ATP phosphoribosyltransferase signature." FT /inference="protein motif:ProSite:PS01316" FT misc_feature 1237138..1237365 FT /gene="hisG" FT /locus_tag="VSAL_I1133" FT /note="HMMPfam hit to PF08029, HisG, C-terminal FT domain,score 6.4e-35" FT /inference="protein motif:HMMPfam:PF08029" FT CDS 1237380..1238675 FT /transl_table=11 FT /gene="hisD" FT /locus_tag="VSAL_I1134" FT /old_locus_tag="TVS1019" FT /product="histidinol dehydrogenase" FT /EC_number="1.1.1.23" FT /db_xref="GOA:B6EJ88" FT /db_xref="InterPro:IPR001692" FT /db_xref="InterPro:IPR012131" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR022695" FT /db_xref="UniProtKB/TrEMBL:B6EJ88" FT /protein_id="CAQ78819.1" FT /translation="MKTLVWQSLSNSQQDTVLQRPAITEGANITAAVTSVINTVKQDGD FT AGVLALTEKFDKVKPESIRVSKSEIDAASERLSEKMKAALQQAYSNISKFHKAQKPQPI FT KVETQPGVVCEQITMPVNKVGLYIPGGSAPLPSTVLMLGIPAQIAGCHKVVLCSPPPIA FT DEILYVAKLCKVDEVYNIGGAQAIAAMAYGTESVSKVDKIFGPGNAYVTEAKRQVSNDF FT RGAAIDMPAGPSEVLVIADETADPDFIAADLLSQAEHGPDSQVILVTPSPIIADQVADA FT IEKQLKELTRADIARQALGSSLLIIAKSLTQCVSISNFYGPEHLIVQTKNPRELLPLLD FT NAGSIFLGEYSPESAGDYASGTNHVLPTYGYTRTHSSLGLADFSKRMTVQELTADGLKG FT LAPTVVTMADAEGLDAHKRAVTIRIEKLAKLN" FT misc_feature 1237419..1238654 FT /gene="hisD" FT /locus_tag="VSAL_I1134" FT /note="HMMPfam hit to PF00815, Histidinol FT dehydrogenase,score 5.8e-263" FT /inference="protein motif:HMMPfam:PF00815" FT misc_feature 1238058..1238156 FT /gene="hisD" FT /locus_tag="VSAL_I1134" FT /note="PS00611 Histidinol dehydrogenase signature." FT /inference="protein motif:ProSite:PS00611" FT CDS 1238690..1239730 FT /transl_table=11 FT /gene="hisC" FT /locus_tag="VSAL_I1135" FT /old_locus_tag="TVS1020" FT /product="histidinol-phosphate aminotransferase" FT /EC_number="2.6.1.9" FT /db_xref="GOA:B6EJ89" FT /db_xref="InterPro:IPR001917" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR005861" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/Swiss-Prot:B6EJ89" FT /protein_id="CAQ78820.1" FT /translation="MEKLARKQVQALTPYLSARRIGGSGDVWLNANESPFDNEYNVNFT FT RLNRYSECQPPELINAYAAYAKVTAEQVLTSRGADEGIELLIRAFCEPNEDAILYCPPT FT YGMYSISAETIGVETKTIPLTSEWQLDLPSIERNLDNVKLVFVCSPNNPTGNVINRKDI FT LSLLEMTKDRAIVVMDEAYIDFCMEVSTVDLLATYPNLAILRTLSKAFALAGLRCGFTL FT ANKELIDVLSKVIAPYPVPVPVADIATQALSEAGLARMKYQMLDLSANRAYLHAGLMVL FT NGVTVHEGWGNYLLVQFSDGDAVFKAAWDHGIILRNSPIKDCVRISVGNREECEKTLGF FT IRNQLM" FT misc_feature 1238759..1239712 FT /gene="hisC" FT /locus_tag="VSAL_I1135" FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II, score 1.9e-62" FT /inference="protein motif:HMMPfam:PF00155" FT misc_feature 1239305..1239334 FT /gene="hisC" FT /locus_tag="VSAL_I1135" FT /note="PS00599 Aminotransferases class-II FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00599" FT CDS 1239808..1240881 FT /transl_table=11 FT /gene="hisB" FT /locus_tag="VSAL_I1136" FT /old_locus_tag="TVS1021" FT /product="histidine biosynthesis bifunctional protein HisB FT [includes: histidinol-phosphatase and FT imidazoleglycerol-phosphate dehydratase]" FT /EC_number="4.2.1.19" FT /db_xref="GOA:B6EJ90" FT /db_xref="InterPro:IPR000807" FT /db_xref="InterPro:IPR005954" FT /db_xref="InterPro:IPR006543" FT /db_xref="InterPro:IPR006549" FT /db_xref="InterPro:IPR013954" FT /db_xref="InterPro:IPR020565" FT /db_xref="InterPro:IPR020566" FT /db_xref="InterPro:IPR020568" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:B6EJ90" FT /protein_id="CAQ78821.1" FT /translation="MSKQQKILFIDRDGTLIVEPPVDFQVDRLDKLKFEPLVISSLLFL FT QEAGYRLVMVTNQDGLGTDSYPQDEFDAPHNMMMEFFESQGVKFDDVLICPHFEEDNCS FT CRKPKLGMVKEYLQGGKVDFQHSVVIGDRQTDLQLAENMAIRGIQYHPETMNWPAILKD FT LTVNAGTAEVIRTTKETDIKVFVNLDEQGGNEISTGLGFFDHMLDQIATHGGFQMKINV FT DGDLHIDDHHTIEDTALALGEALKEALGDKRGIGRFGFSLPMDECLAQCALDLSGRPYL FT KFDAEFSRDQVGDLSTEMVVHFFRSLTDTLACTLHLSSAGHNDHHIIESLFKAFGRTLR FT QAIKVEGNELPSSKGVL" FT misc_feature 1240399..1240827 FT /gene="hisB" FT /locus_tag="VSAL_I1136" FT /note="HMMPfam hit to PF00475, Imidazoleglycerol-phosphate FT dehydratase, score 6.6e-96" FT /inference="protein motif:HMMPfam:PF00475" FT misc_feature 1240489..1240530 FT /gene="hisB" FT /locus_tag="VSAL_I1136" FT /note="PS00954 Imidazoleglycerol-phosphate dehydratase FT signature 1." FT /inference="protein motif:ProSite:PS00954" FT misc_feature 1240768..1240806 FT /gene="hisB" FT /locus_tag="VSAL_I1136" FT /note="PS00955 Imidazoleglycerol-phosphate dehydratase FT signature 2." FT /inference="protein motif:ProSite:PS00955" FT CDS 1240890..1241504 FT /transl_table=11 FT /gene="hisH" FT /locus_tag="VSAL_I1137" FT /old_locus_tag="TVS1022" FT /product="imidazole glycerol phosphate synthase subunit FT HisH (imidazole glycerol synthase glutamine FT amidotransferase subunit)" FT /EC_number="2.4.2.-" FT /db_xref="GOA:B6EJ91" FT /db_xref="InterPro:IPR010139" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/TrEMBL:B6EJ91" FT /protein_id="CAQ78822.1" FT /translation="MTKQNVVIIDTGCSNVSSVRFAIERLGYDVTISRDPQVVLAADKL FT FLPGVGTASEAMKNLAERDLIELVKQVEKPLLGICLGMQLLGKLSEEKGQKADQIVDCL FT GLCDGEVRKLQTGDLPLPHMGWNTIKPIEGNPLFKDIPENSYFYFVHSFGMQVGDYTIA FT TCDYGQPFTAALQVGNYYGVQFHPERSSKVGSTLIQNFLEL" FT misc_feature 1240908..1241501 FT /gene="hisH" FT /locus_tag="VSAL_I1137" FT /note="HMMPfam hit to PF00117, Glutamine amidotransferase FT class-I, score 7.9e-36" FT /inference="protein motif:HMMPfam:PF00117" FT misc_feature 1241112..1241147 FT /gene="hisH" FT /locus_tag="VSAL_I1137" FT /note="PS00442 Glutamine amidotransferases class-I active FT site." FT /inference="protein motif:ProSite:PS00442" FT CDS 1241619..1242356 FT /transl_table=11 FT /gene="hisA" FT /locus_tag="VSAL_I1138" FT /old_locus_tag="TVS1023" FT /product="1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) FT methylideneamino] imidazole-4-carboxamide isomerase FT (phosphoribosylformimino-5-aminoimidazole carboxamide FT ribotid isomerase)" FT /EC_number="5.3.1.16" FT /db_xref="GOA:B6EJ92" FT /db_xref="InterPro:IPR006062" FT /db_xref="InterPro:IPR006063" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR023016" FT /db_xref="UniProtKB/Swiss-Prot:B6EJ92" FT /protein_id="CAQ78823.1" FT /translation="MIIPALDLIEGQVVRLFQGDYGQVTEYKVDPAEQFNLYHQAGANW FT LHLVDLTGAKDTTARQLDLIARLLASTPANIQIGGGVRNEADVQDLLNAGAQRVVIGST FT AVKQPELVKGWMEKYGAEKIVLALDINIDENGTRNVAISGWQEDSGVTIEALLEDYLTV FT GLKHVLCTDISRDGTLQGSNVELYVDLCKQYPQVQFQSSGGIGSLDDIVALKGSGVAGV FT IVGRALLDGKFTAEEAFQCWQSE" FT misc_feature 1241619..1242320 FT /gene="hisA" FT /locus_tag="VSAL_I1138" FT /note="HMMPfam hit to PF00977, Histidine biosynthesis FT protein, score 1.5e-108" FT /inference="protein motif:HMMPfam:PF00977" FT CDS 1242338..1243111 FT /transl_table=11 FT /gene="hisF" FT /locus_tag="VSAL_I1139" FT /old_locus_tag="TVS1024" FT /product="imidazole glycerol phosphate synthase subunit FT HisF" FT /EC_number="4.1.3.-" FT /db_xref="GOA:B6EJ93" FT /db_xref="InterPro:IPR004651" FT /db_xref="InterPro:IPR006062" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:B6EJ93" FT /protein_id="CAQ78824.1" FT /translation="MLAKRIIPCLDVKDGQVVKGVQFRNHEIIGDIVPLAQRYAEEGAD FT ELVFYDITASSDGRVVDKSWVARVAEVIDIPFCVAGGIKTAEDAAKILEFGADKVSINS FT PALANPELITELADKFGVQCIVVGIDSYFDKETGKYQVYQFTGDEERTKATKWETKDWV FT QEVQKRGAGEIVLNMMNQDGVRNGYDLEQLNMVREVCHVPLIASGGAGEMVHFADVYKK FT TNVDGALAASVFHKQIINIGELKEYLAQQKIEVRR" FT misc_feature 1242350..1243057 FT /gene="hisF" FT /locus_tag="VSAL_I1139" FT /note="HMMPfam hit to PF00977, Histidine biosynthesis FT protein, score 3e-117" FT /inference="protein motif:HMMPfam:PF00977" FT CDS 1243108..1243728 FT /transl_table=11 FT /gene="hisI" FT /locus_tag="VSAL_I1140" FT /old_locus_tag="TVS1025" FT /product="histidine biosynthesis bifunctional protein HisIE FT [includes: phosphoribosyl-AMP cyclohydrolase and FT phosphoribosyl-ATP pyrophosphatase]" FT /EC_number="3.6.1.31" FT /db_xref="GOA:B6EJ94" FT /db_xref="InterPro:IPR002496" FT /db_xref="InterPro:IPR008179" FT /db_xref="InterPro:IPR021130" FT /db_xref="InterPro:IPR023019" FT /db_xref="UniProtKB/TrEMBL:B6EJ94" FT /protein_id="CAQ78825.1" FT /translation="MSQQDFATRIDWEKVDGLVPAIIQDFSSSQVLMMGYMNKDALSKT FT LETKKVTFFSRTKNRLWTKGEESGDSLNLVNISLDCDNDTLLIKVKPVGPTCHTGTTTC FT WDSDKTEESQLVWLHQLEQLLAERKNADPDSSYTASLYARGTKRISQKVGEEGVEVALA FT ATSGDKAELVCESADLMYHLFVLLQDQGLSFDDVINKLKERHT" FT misc_feature 1243204..1243428 FT /gene="hisI" FT /locus_tag="VSAL_I1140" FT /note="HMMPfam hit to PF01502, Phosphoribosyl-AMP FT cyclohydrolase, score 1.4e-41" FT /inference="protein motif:HMMPfam:PF01502" FT misc_feature 1243459..1243725 FT /gene="hisI" FT /locus_tag="VSAL_I1140" FT /note="HMMPfam hit to PF01503, Phosphoribosyl-ATP FT pyrophosphohydrolase, score 1.5e-47" FT /inference="protein motif:HMMPfam:PF01503" FT CDS 1243866..1244357 FT /transl_table=11 FT /locus_tag="VSAL_I1141" FT /old_locus_tag="TVS1026" FT /product="V10 pilin" FT /db_xref="InterPro:IPR001120" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:B6EJ95" FT /protein_id="CAQ78826.1" FT /translation="MKKASGFTLIELVVVIVILGILAVVAAPKFLNLQNDAKAAVINGL FT KGEMEGAISLTYSKAAILGIEKEDSIIQDGITYSYGYPIYDQWTQYMEIDYESYTVNKE FT WAGGSINDKDGIAEYISLSSIVGTYDQKDSVKKTNCYVKYVVAKSVDEPYQLSTVTTGC FT " FT sig_peptide 1243866..1243943 FT /locus_tag="VSAL_I1141" FT misc_feature 1243878..1243949 FT /locus_tag="VSAL_I1141" FT /note="HMMPfam hit to PF07963, Prokaryotic N-terminal FT methylation motif, score 3.7e-08" FT /inference="protein motif:HMMPfam:PF07963" FT misc_feature 1243878..1243946 FT /locus_tag="VSAL_I1141" FT misc_feature 1243878..1243940 FT /locus_tag="VSAL_I1141" FT /note="PS00409 Prokaryotic N-terminal methylation site." FT /inference="protein motif:ProSite:PS00409" FT CDS 1244482..1245168 FT /transl_table=11 FT /locus_tag="VSAL_I1142" FT /old_locus_tag="TVS1027" FT /product="RNA psedouridine synthase" FT /db_xref="GOA:B6EJ96" FT /db_xref="InterPro:IPR006145" FT /db_xref="InterPro:IPR006224" FT /db_xref="InterPro:IPR006508" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/TrEMBL:B6EJ96" FT /protein_id="CAQ78827.1" FT /translation="MFDILYQNSDFLVINKHPNVSVHKDDGDTSLLIELAKVTGDKQLY FT LIHRLDKMTSGLLLIGRHQSAASELSQLFAKRLVEKYYLAIGDKKPKKKQGLVIGDMER FT SRRASWKLINSKENPAITQFFSTAAHNGNRLFLCKPHTGKTHQIRVALKSVGSGILGDS FT IYSSSKADRGYLHAYALRFTYQEQAFEFIETPKQGEEWQDDTVQAGLAQWQTPWTLTWP FT EIKKKS" FT misc_feature 1244509..1244943 FT /locus_tag="VSAL_I1142" FT /note="HMMPfam hit to PF00849, RNA pseudouridylate FT synthase, score 1.3e-39" FT /inference="protein motif:HMMPfam:PF00849" FT misc_feature 1244620..1244664 FT /locus_tag="VSAL_I1142" FT /note="PS01129 Rlu family of pseudouridine synthase FT signature." FT /inference="protein motif:ProSite:PS01129" FT CDS 1245165..1246130 FT /transl_table=11 FT /locus_tag="VSAL_I1143" FT /old_locus_tag="TVS1028" FT /product="hypothetical protein" FT /db_xref="GOA:B6EJ97" FT /db_xref="InterPro:IPR019614" FT /db_xref="UniProtKB/TrEMBL:B6EJ97" FT /protein_id="CAQ78828.1" FT /translation="MKIEALDTLFTHLEQQLTQPLGELRRLFHGRGQCFEGLEQITVDW FT LQAKDSQGQGSQGQLVVALFKEQDLEFVEELEARLKAFADSELWTNAKGSSILLQHRYQ FT ELAPTQVVWGDENTFPVVEENGLKYQLELKKNQNMGIFLDMRYGRQWVQAHSEGKSVLN FT LFAYTCGFSVAAIAGGATQVVNLDMAKASLGRGRDNHRLNEHDLSKVKFLGHDIFKSWG FT KIKKLGLYDLIIIDPPSFQKGSFALTKDYQKILRRLPDLLTENGEVLACVNSPAVSTDF FT LTDGMAEEAPELKYIERLDNPPEFADINPESGLKVMRFTR" FT CDS complement(1246208..1246606) FT /transl_table=11 FT /locus_tag="VSAL_I1144" FT /old_locus_tag="TVS1029" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR016502" FT /db_xref="UniProtKB/TrEMBL:B6EJ98" FT /protein_id="CAQ78829.1" FT /translation="MKKILFTAFSLILLSGCASNEQQKEIDMLADYRASVLSSVLPLEI FT GPLTLLRAKAKHGVVEMMFLDSGNGKVSTTEVIEKSITTFCKDNEVRPVIDKGVTYQYI FT IRNSRGQQQNNIIVNEQSCLDREQTEKK" FT sig_peptide complement(1246547..1246606) FT /locus_tag="VSAL_I1144" FT misc_feature complement(1246556..1246588) FT /locus_tag="VSAL_I1144" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1246625..1246927) FT /transl_table=11 FT /locus_tag="VSAL_I1145" FT /old_locus_tag="TVS1030" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR005545" FT /db_xref="InterPro:IPR011008" FT /db_xref="UniProtKB/TrEMBL:B6EJ99" FT /protein_id="CAQ78830.1" FT /translation="MWYIIFSQDVENSLERRLRVREQHLARLTTLQNEGRLLVAGPMPA FT IDSENPGEAGFTGSTVIADFDSLASAQEWANNDPYIDAGVYANVIVKPFKKVLPA" FT misc_feature complement(1246634..1246903) FT /locus_tag="VSAL_I1145" FT /note="HMMPfam hit to PF03795, YCII-related domain, score FT 1.5e-44" FT /inference="protein motif:HMMPfam:PF03795" FT CDS complement(1247050..1247472) FT /transl_table=11 FT /gene="yciA" FT /locus_tag="VSAL_I1146" FT /old_locus_tag="TVS1031" FT /product="acyl-CoA thioester hydrolase (p14 protein)" FT /EC_number="3.1.2.-" FT /db_xref="GOA:B6EJA0" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:B6EJA0" FT /protein_id="CAQ78831.1" FT /translation="MEIILNTSVNTDQVPKGQLLLRTLSMPADTNANGDIFGGWIMSQL FT DLAGGILAKEISGGRIVTVSVSSITFKKPVKVGDVVCCYGECVNIGRTSMSINLEVWVK FT PIKEDGIGDRFQVCEATFNYVAIDAKGKPRPILKNA" FT misc_feature complement(1247143..1247376) FT /gene="yciA" FT /locus_tag="VSAL_I1146" FT /note="HMMPfam hit to PF03061, Thioesterase FT superfamily,score 1.7e-21" FT /inference="protein motif:HMMPfam:PF03061" FT CDS complement(1247571..1248116) FT /transl_table=11 FT /gene="ispZ" FT /locus_tag="VSAL_I1147" FT /old_locus_tag="TVS1032" FT /product="probable intracellular septation protein" FT /db_xref="GOA:B6EJA1" FT /db_xref="InterPro:IPR006008" FT /db_xref="UniProtKB/Swiss-Prot:B6EJA1" FT /protein_id="CAQ78832.1" FT /translation="MKQILDFIPLIIFFALYKMYDIYTATGALIVATAVQLILTYVLYK FT KVEKMQLITFIMVTVFGGMTIFLHDDNFIKWKVTIVYAVFAAGLIIAQILGRPIIKGML FT GKEVTLPDNKWNKINYAWILFFTACSIANLYVAFEMPLDVWVNFKVFGLLGLTFIYTLL FT TGMYVYKHMPKEKKEEQE" FT misc_feature complement(1247592..1248116) FT /gene="ispZ" FT /locus_tag="VSAL_I1147" FT /note="HMMPfam hit to PF04279, Intracellular septation FT protein A, score 1.1e-102" FT /inference="protein motif:HMMPfam:PF04279" FT misc_feature complement(order(1247610..1247669,1247697..1247756, FT 1247817..1247885,1247913..1247966,1247985..1248053)) FT /gene="ispZ" FT /locus_tag="VSAL_I1147" FT CDS complement(join(1248317..1249351,1249354..1249584)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1148" FT /old_locus_tag="TVS1033" FT /product="sodium/dicarboxylate symporter (pseudogene)" FT /note="Similar to Escherichia coli Proton glutamate symport FT protein UniProt:P21345 (EMBL:ECGACAR) (437 aa) blastp FT scores: E()=8e-46. CDS contains a frameshift after codon FT 77. The sequence has been checked and is believed to be FT correct" FT /inference="similar to sequence:UniProt:P21345" FT misc_feature complement(order(1248368..1249351,1249354..1249545)) FT /locus_tag="VSAL_I1148" FT /note="HMMPfam hit to PF00375, Sodium:dicarboxylate FT symporter family, score 7.2e-104" FT /inference="protein motif:HMMPfam:PF00375" FT misc_feature complement(1248368..1249285) FT /locus_tag="VSAL_I1148" FT /note="HMMPfam hit to PF00375, Sodium:dicarboxylate FT symporter family, score 3.1e-42" FT /inference="protein motif:HMMPfam:PF00375" FT misc_feature complement(order(1248446..1248514,1248527..1248595, FT 1248632..1248700,1248728..1248787,1248836..1248904, FT 1248947..1249015,1249073..1249132,1249378..1249446, FT 1249489..1249557)) FT /locus_tag="VSAL_I1148" FT CDS complement(1249890..1250696) FT /transl_table=11 FT /gene="trpA" FT /locus_tag="VSAL_I1149" FT /old_locus_tag="TVS1036" FT /product="tryptophan synthase alpha chain" FT /EC_number="4.2.1.20" FT /db_xref="GOA:B6EJA2" FT /db_xref="InterPro:IPR002028" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR018204" FT /db_xref="UniProtKB/Swiss-Prot:B6EJA2" FT /protein_id="CAQ78834.1" FT /translation="MDRYQALFAKLAEKNQGAFVPFVTIGDPNPELSYEIMDTLVKAGA FT DALELGIPFSDPLADGPTIQGANIRALNSKTTPIVCFDLIAKIRAKYPETPIGLLVYAN FT LVFANGIDTFYTKCQQAGVDSVLIADVPTNESEEFRTSAIKHNVHPIFIAPPSASDETL FT ETVAKLGGGYTYLLSRAGVTGAETKAGMPVAQLLARLNQFDAPPAILGFGISEPAQVEE FT AIKAGAAGAISGSATVKIIEQHQDNPAALLDALTAFTSAMKAATQK" FT misc_feature complement(1249896..1250675) FT /gene="trpA" FT /locus_tag="VSAL_I1149" FT /note="HMMPfam hit to PF00290, Tryptophan synthase alpha FT chain, score 6.1e-130" FT /inference="protein motif:HMMPfam:PF00290" FT misc_feature complement(1250514..1250555) FT /gene="trpA" FT /locus_tag="VSAL_I1149" FT /note="PS00167 Tryptophan synthase alpha chain signature." FT /inference="protein motif:ProSite:PS00167" FT CDS complement(1250696..1251886) FT /transl_table=11 FT /gene="trpB" FT /locus_tag="VSAL_I1150" FT /old_locus_tag="TVS1037" FT /product="tryptophan synthase beta chain 1" FT /EC_number="4.2.1.20" FT /db_xref="GOA:B6EJA3" FT /db_xref="InterPro:IPR001926" FT /db_xref="InterPro:IPR006653" FT /db_xref="InterPro:IPR006654" FT /db_xref="InterPro:IPR023026" FT /db_xref="UniProtKB/Swiss-Prot:B6EJA3" FT /protein_id="CAQ78835.1" FT /translation="MAKLDAYFGEYGGQYVPQILVPALDQLEQAFIDAQADEDFRAEFM FT TLLQEYAGRPTALTLCRNLTKGTKTKLYLKREDLLHGGAHKTNQVLGQALLALRMGKKE FT IIAETGAGQHGVATALACALLGLKCRVYMGAKDIERQSPNVFRMELMGAEVIPVHSGSA FT TLKDACNEALRDWSATYETAHYLLGTAAGPHPFPTIVREFQRMIGEETKMQILAREGRL FT PDAVIACVGGGSNAIGMFADFIKEENVRLIGVEPAGKGIDTDQHGAPLKHGKTGIFFGM FT KAPLMQDEHGQIEESYSVSAGLDFPSVGPQHAHLNSIGRAEYGSVTDDEALEAFQILAK FT GEGIIPALESSHALAYALQMAHSEPEKEQLLVVNLSGRGDKDIFTVHDILKEKGEI" FT misc_feature complement(1250753..1251742) FT /gene="trpB" FT /locus_tag="VSAL_I1150" FT /note="HMMPfam hit to PF00291, Pyridoxal-phosphate FT dependent enzyme, score 3.4e-118" FT /inference="protein motif:HMMPfam:PF00291" FT misc_feature complement(1251062..1251085) FT /gene="trpB" FT /locus_tag="VSAL_I1150" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(1251623..1251652) FT /gene="trpB" FT /locus_tag="VSAL_I1150" FT /note="PS00168 Tryptophan synthase beta chain FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00168" FT CDS complement(1251897..1253309) FT /transl_table=11 FT /gene="trpC" FT /locus_tag="VSAL_I1151" FT /old_locus_tag="TVS1038" FT /product="tryptophan biosynthesis protein TrpCF" FT /EC_number="5.3.1.24" FT /db_xref="GOA:B6EJA4" FT /db_xref="InterPro:IPR001240" FT /db_xref="InterPro:IPR001468" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR013798" FT /db_xref="UniProtKB/TrEMBL:B6EJA4" FT /protein_id="CAQ78836.1" FT /translation="MTQQLSEHISVENTQMAEVLVKIVKDKVIWVSERKETQPLDSFQN FT GLTASDRSFYKALKTGNTEFILECKKASPSKGLIRQDFDLNYIASVYNNHASAISVLTD FT EKYFQGSFDFLPIIRDQVNQPILCKDFMIDTYQVYLARHYGADAILLMLSVLDDEQYCE FT LAAVAHSLSMGILTEVSNEEELHRAVALEAQVIGINNRNLRDLSTDLNRTKELAPLLPK FT DTTIISESGIYNHQQVKDLAKHATGFLIGSSLMSEENLELAARKVILGENKVCGLTSIE FT DAKAVYNAGAVYGGLIFVEKSPRFVSLETAKTITQATTLNYVGVFQNETLKNIVKTAND FT LSLSVIQLHGNESEDYITELKQQLPTTCQVWNVISVSDDAQSISLPQSVADKVLVDCKV FT GSQTGGTGVSFDWNKLPHNNIILAGGLSLENTKTASQLGCFGLDFNSGVETTPGKKDHK FT KLSAVFSALRNY" FT misc_feature complement(1251912..1252496) FT /gene="trpC" FT /locus_tag="VSAL_I1151" FT /note="HMMPfam hit to FT PF00697,N-(5'phosphoribosyl)anthranilate (PRA) isome, score FT 1.5e-71" FT /inference="protein motif:HMMPfam:PF00697" FT misc_feature complement(1252509..1253255) FT /gene="trpC" FT /locus_tag="VSAL_I1151" FT /note="HMMPfam hit to PF00218, Indole-3-glycerol phosphate FT synthase, score 1.4e-140" FT /inference="protein motif:HMMPfam:PF00218" FT misc_feature complement(1253073..1253117) FT /gene="trpC" FT /locus_tag="VSAL_I1151" FT /note="PS00614 Indole-3-glycerol phosphate synthase FT signature." FT /inference="protein motif:ProSite:PS00614" FT CDS complement(1253315..1254322) FT /transl_table=11 FT /gene="trpD" FT /locus_tag="VSAL_I1152" FT /old_locus_tag="TVS1039" FT /product="anthranilate phosphoribosyltransferase" FT /EC_number="2.4.2.18" FT /note="Possible alternative translational start site after FT codon 3" FT /db_xref="GOA:B6EJA5" FT /db_xref="InterPro:IPR000312" FT /db_xref="InterPro:IPR005940" FT /db_xref="InterPro:IPR017459" FT /db_xref="InterPro:IPR020072" FT /db_xref="UniProtKB/TrEMBL:B6EJA5" FT /protein_id="CAQ78837.1" FT /translation="MTQIEAIFNKLYSQVSLSETESQILFDAIIKGELDPILLTAALTC FT LKIKGETPNEIAGAAKALLKNANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAAC FT GLKIAKHGNRGISSKSGSSDLLDSFGINLAMSAEDTRKAVDDLGVAFLFAPHYHGGVRH FT AMPIRQTMKTRTIFNILGPLINPARPNIELMGVYDESLVRPIAETMVNMGMKRAAVVFG FT SGLDEVAIHGPTTVAEIINGEIKEYTLTPEDFGLETHPLDAIKGGEPEENKAIITDILT FT GKGTDAQLGAIAVNVSLLMRLFGHEDLKANAQKAIDAMNSGKAFTLVQQLAARG" FT misc_feature complement(1253348..1254103) FT /gene="trpD" FT /locus_tag="VSAL_I1152" FT /note="HMMPfam hit to PF00591, Glycosyl transferase family, FT a/b doma, score 9.8e-149" FT /inference="protein motif:HMMPfam:PF00591" FT misc_feature complement(1254119..1254316) FT /gene="trpD" FT /locus_tag="VSAL_I1152" FT /note="HMMPfam hit to PF02885, Glycosyl transferase family, FT helical, score 9.2e-25" FT /inference="protein motif:HMMPfam:PF02885" FT CDS complement(1254333..1254941) FT /transl_table=11 FT /gene="trpG" FT /locus_tag="VSAL_I1153" FT /old_locus_tag="TVS1040" FT /product="anthranilate synthase component II" FT /EC_number="4.1.3.27" FT /db_xref="GOA:B6EJA6" FT /db_xref="InterPro:IPR006221" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/TrEMBL:B6EJA6" FT /protein_id="CAQ78838.1" FT /translation="MTHIVLLDNFDSFTYNLVDQFRSLGYPVTIYRNSLSAIAFEDAVT FT KLENPVVVLSPGPGAPSEAGCMPDVIQRLKGKVPMIGICLGHQAIVEAYDGIVAGAGEI FT VHGKSAMMTHNQHAIFDGLPNPLSIARYHSLVATKVTKQLTVTATVDDLVMAVIQEEDK FT VCGFQFHPESILTTQGEQLLINTLNWALDITQSHSENKE" FT misc_feature complement(1254375..1254929) FT /gene="trpG" FT /locus_tag="VSAL_I1153" FT /note="HMMPfam hit to PF00117, Glutamine amidotransferase FT class-I, score 1.6e-63" FT /inference="protein motif:HMMPfam:PF00117" FT misc_feature complement(1254615..1254638) FT /gene="trpG" FT /locus_tag="VSAL_I1153" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature complement(1254672..1254707) FT /gene="trpG" FT /locus_tag="VSAL_I1153" FT /note="PS00442 Glutamine amidotransferases class-I active FT site." FT /inference="protein motif:ProSite:PS00442" FT CDS complement(1254941..1256578) FT /transl_table=11 FT /gene="trpE" FT /locus_tag="VSAL_I1154" FT /old_locus_tag="TVS1041" FT /product="anthranilate synthase component I" FT /EC_number="4.1.3.27" FT /db_xref="GOA:B6EJA7" FT /db_xref="InterPro:IPR005257" FT /db_xref="InterPro:IPR005801" FT /db_xref="InterPro:IPR006805" FT /db_xref="InterPro:IPR015890" FT /db_xref="InterPro:IPR019999" FT /db_xref="UniProtKB/TrEMBL:B6EJA7" FT /protein_id="CAQ78839.1" FT /translation="MPIQKKLTEDQRISREAMMQSSHSKDGQLELLCLEVPYVSDPTEL FT YSTLCANQAMSLLLESAEVDSKQNLKSLMLIDAAVRIHCFDKIVTLEALTKNGEALLKT FT LRLSLPSSLVDLISSSVLKLHFPEINQDLDEDSRLRELSSFDALRFIQNQFDLTGLPSN FT ALFLGGLFAYDLVANFEQLGSAETTNKCPDYLFYIAESLLVIDHQTKTSTVQGSIFTKE FT PAIKQNISTRLEAINVFCSEPHTLPDAPILDRCEALPSVSDEDFCQTVLDLKEYVIRGD FT VFQVVPSRRFTLPCPAPLSAYRELKIGNPSPYMFYLQDRDFTLFGASPESALKYCKDSN FT QVEIYPIAGTRQRGKNNDGSINYDLDSRIELELRCDTKENAEHMMLVDLARNDVARISA FT PGTRYVADLLKVDRYSHVMHLVSRVVGQLRGDLDALHAYQACMNMGTLTGAPKIRAMQL FT IRDVEKTRRGTYGGAVGYLTGDGHMDTCIVIRSAYVEDGIAQVQAGAGVVYDSHPQAEA FT DETRGKAQAVISAIQKAHLASQKAKEKN" FT misc_feature complement(1254986..1255795) FT /gene="trpE" FT /locus_tag="VSAL_I1154" FT /note="HMMPfam hit to PF00425, chorismate binding FT enzyme,score 3.4e-151" FT /inference="protein motif:HMMPfam:PF00425" FT misc_feature complement(1255937..1256470) FT /gene="trpE" FT /locus_tag="VSAL_I1154" FT /note="HMMPfam hit to PF04715, Anthranilate synthase FT component I, N, score 3.8e-22" FT /inference="protein motif:HMMPfam:PF04715" FT CDS 1256941..1257786 FT /transl_table=11 FT /locus_tag="VSAL_I1155" FT /old_locus_tag="TVS1042" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EJA8" FT /db_xref="InterPro:IPR003141" FT /db_xref="InterPro:IPR004013" FT /db_xref="InterPro:IPR016195" FT /db_xref="UniProtKB/TrEMBL:B6EJA8" FT /protein_id="CAQ78840.1" FT /translation="MKIDLHSHTTASDGRLSPTELVERAVNFDVKVFAITDHDTVAGLA FT EAHKAIKEKDLPLHLIDGIEISTLWSNKDIHVVGLNLDINHPELLALIEQQEARRIARA FT EKMAERLERAGYPGALEGAKALANGGTLTRAHFGKWLVDQGYAKTMQAVFKKFLTRNNI FT GYVPPEWCSIEEAVEVIHNAGGKAILAHPGRYNLTAKWIKRLLAAFVEAKGDAMEVALP FT QQGVQERRVLADYAIHFDLLVSQGSDFHYPSPWTELGRNLWLPAGVVPVWQDWALPTFE FT " FT misc_feature 1256947..1257699 FT /locus_tag="VSAL_I1155" FT /note="HMMPfam hit to PF02811, PHP domain, score 3.9e-32" FT /inference="protein motif:HMMPfam:PF02811" FT CDS 1257859..1258479 FT /transl_table=11 FT /locus_tag="VSAL_I1156" FT /old_locus_tag="TVS1043" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR004388" FT /db_xref="InterPro:IPR006070" FT /db_xref="InterPro:IPR017945" FT /db_xref="UniProtKB/TrEMBL:B6EJA9" FT /protein_id="CAQ78841.1" FT /translation="MSQFFYVHPDNPQARLISQAVAIIRDGGVIIYPTDSGYALGCQIE FT NKQALERICQIRRLDDKHNFTLVCRDLSELSIYARVDNTMFRLLKNNTPGAYTFIFKGT FT KEVPRRLMNPKRKTIGMRVPDNKIALDLLEALGEPLMSTTLILPGNEMAEADPEAIRDQ FT LEHAVDLIMNGGYLGEQPTTVIDFSDDDIKIARVGAGDPSPFE" FT misc_feature 1257922..1258452 FT /locus_tag="VSAL_I1156" FT /note="HMMPfam hit to PF01300, yrdC domain, score 2.5e-62" FT /inference="protein motif:HMMPfam:PF01300" FT misc_feature 1257943..1257981 FT /locus_tag="VSAL_I1156" FT /note="PS01147 SUA5/yciO/yrdC family signature." FT /inference="protein motif:ProSite:PS01147" FT CDS complement(1258540..1261008) FT /transl_table=11 FT /gene="ainR" FT /locus_tag="VSAL_I1157" FT /old_locus_tag="TVS1044" FT /product="autoinducer regulatory protein AinR" FT /EC_number="3.1.3.-" FT /db_xref="GOA:B6EJH9" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:B6EJH9" FT /protein_id="CAQ78842.1" FT /translation="MLIGFPKDKLLLFIAVFILLWVAFFIRSLFKERMKVDPKIYYPYI FT GYSIFIVFWVLINYYFQSNLLLHFSERVATTMAILANLASYFAFAFAFLFSCRLSSTRK FT NKKMATWQIILFYAETIFAITINTIPNQTVTGVTIVEKGIFTIHFGPFASFFFINAFLF FT IGLIFYNFFKLRKSTIRLNKEKSIYLLFGIVIFMISTIISQIIIPIIWQDFSFAWLPPA FT LSVTEAILIGYTLLYHRLYSLRYLAFWILSYSLNALIYLLPLFYIYKGASESNLLYMSI FT FLIVFTGLFWEKSLKRTKKMSSLLIYKDRKTPVEKIYAIAEEFKFSSNNAMVKLAELLN FT TPKEDLLLVGKNANYNIFIPHLNKIHSALVKDELDYQIHYAPEKDNSSLHQVQEKMNES FT KTALILPIFGENKHISHLLISSNKRDGSTFSNEEISAIQWVLTKVQGYIESERKVLQSQ FT ALANSIAHEMRNPLSQLQYHFERIKHHSSIDKENKELINNELRQGSLAIQRGAQLIDII FT LSEAKNTAINDELFTHYSAALLTERIVDEYAFDSDDMKKRINIDLSQDFIFNLNDTLYS FT FILFNLLRNAVHYFSECNSTISIRLVKGFASNKVIFRDTGPGIDSHILPNIFDDFFTHN FT KEGGSGLGLSYCLRVMHAFEGNIACYSKKGEFTEFVLSFPYIEGDLTSLINQQEHHESA FT LPLIDVYDSGDTIKTILIVDDKKVQRMLIQTFIAQDNMNILQAENGEEAISIAMNHPLD FT IIFMDSRMPVMNGIDAAKRIKLSYPNLPIIALTGESGHDEIQRISQVMDGYLTKPISKP FT QLIQTLHKWV" FT misc_feature complement(1258552..1258887) FT /gene="ainR" FT /locus_tag="VSAL_I1157" FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 1.4e-29" FT /inference="protein motif:HMMPfam:PF00072" FT misc_feature complement(1258978..1259301) FT /gene="ainR" FT /locus_tag="VSAL_I1157" FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HS, score 2.1e-17" FT /inference="protein motif:HMMPfam:PF02518" FT misc_feature complement(1259431..1259643) FT /gene="ainR" FT /locus_tag="VSAL_I1157" FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain, score 0.0094" FT /inference="protein motif:HMMPfam:PF00512" FT misc_feature complement(order(1260136..1260189,1260208..1260276, FT 1260379..1260447,1260508..1260576,1260619..1260687, FT 1260724..1260792,1260820..1260888,1260922..1260981)) FT /gene="ainR" FT /locus_tag="VSAL_I1157" FT CDS complement(1261020..1262210) FT /transl_table=11 FT /gene="ainS" FT /locus_tag="VSAL_I1158" FT /old_locus_tag="TVS1045" FT /product="autoinducer synthase" FT /db_xref="GOA:B6EJI0" FT /db_xref="InterPro:IPR020384" FT /db_xref="UniProtKB/TrEMBL:B6EJI0" FT /protein_id="CAQ78843.1" FT /translation="MKEPKKNLQHEFIKELHEYCHRTQNYNLLQHLISTREATILSRLH FT HTDIGNLGHNFNTLQATEIIGKQPCASLPESYFIIEQLAMKVFGCLLICRTEYEIFKII FT HHSTHSLHKKLVSTNQSSHKNTINENYHYELVSDIALEQRYFQTEYSDVPLLLSDAIVL FT INIVTFIKEHKWYEMLNHLALSSQGEHFILYQYEDHTHAPMLISSALIESYKKKDDWLF FT FDDFFQSNKWVNENSFNTISSYFPKLDSLLTSTQKHLSLVSVSELENAMFHSIEDKTSI FT CGVIRFTISGQTSKINYHMYLAQKGLANALYDTGRDMIFSIIEQPAMVLFYQAMNSVND FT SKPPFLFTSSQDINHTGLVTYKGICLTNNASHAFDQCNFKSYNVNIIRKRKELNKR" FT CDS 1262544..1263608 FT /transl_table=11 FT /gene="rluB" FT /locus_tag="VSAL_I1159" FT /old_locus_tag="TVS1046" FT /product="ribosomal large subunit pseudouridine synthase B FT (rRNA pseudouridylate synthase B)" FT /EC_number="5.4.99.-" FT /db_xref="GOA:B6EJI1" FT /db_xref="InterPro:IPR000748" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR006145" FT /db_xref="InterPro:IPR018496" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/TrEMBL:B6EJI1" FT /protein_id="CAQ78844.1" FT /translation="MSEKLQKVLARAGLGSRRELETMIQAGRVSIDGQKAKLGDRLENV FT DARIRIDGHVVSVKESTDVICRVLAYHKPEGELCTRHDPEGRRTVFDRLPKIKDSRWVS FT VGRLDANTAGLLLFTTDGELANRLMHPSRKVEREYMCRIFGDINDKMVKNLVTGVKLED FT GEARFEDVMYAGGEGMNHTFYVVINEGRNREVRRLWDSQGVTVSRLKRVRYGDIFLEKA FT LPRGGWMELELKEVNYLRDMVELPHEKESLLDVDKESRKRAKSKSQKIRRAVKRHDERT FT TEDRNTAGGRRGRNNKKPVGGSLPTAKKPTSIESAKPAGKGKPKGKPSANGAKPIRTKF FT SPNGKAPKSAPRQR" FT misc_feature 1262550..1262690 FT /gene="rluB" FT /locus_tag="VSAL_I1159" FT /note="HMMPfam hit to PF01479, S4 domain, score 8.3e-09" FT /inference="protein motif:HMMPfam:PF01479" FT misc_feature 1262742..1263146 FT /gene="rluB" FT /locus_tag="VSAL_I1159" FT /note="HMMPfam hit to PF00849, RNA pseudouridylate FT synthase, score 5.2e-09" FT /inference="protein motif:HMMPfam:PF00849" FT misc_feature 1262859..1262903 FT /gene="rluB" FT /locus_tag="VSAL_I1159" FT /note="PS01149 Rsu family of pseudouridine synthase FT signature." FT /inference="protein motif:ProSite:PS01149" FT CDS complement(1263713..1264453) FT /transl_table=11 FT /locus_tag="VSAL_I1160" FT /old_locus_tag="TVS1047" FT /product="putative NAD-or NADP-dependent oxidoreductase" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EJI2" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020904" FT /db_xref="UniProtKB/TrEMBL:B6EJI2" FT /protein_id="CAQ78845.1" FT /translation="MNYHVSANALKNKTILVTGAGDGIGKQAALSYAKHGATVILLGRT FT VAKLEAVYDEIETAGYPTPAIIPLDLKGAKKQHYIDMAETIQSQFGKLDGLLHNAGLLG FT ILSPFEQFEESIFDEVMQINVKAQFLMTQALLPVLQKSDDSRIIFTTSTVGHQGRAFWG FT AYAISKFATEGMMQTLAHEMEGTHVKVNAINPGGTHTRMRAQAFPAEDISLLKTPEDLM FT PLYVYLMAPESITVNGQCIDAQPK" FT misc_feature complement(1263902..1264417) FT /locus_tag="VSAL_I1160" FT /note="HMMPfam hit to PF00106, short chain FT dehydrogenase,score 7.1e-21" FT /inference="protein motif:HMMPfam:PF00106" FT misc_feature complement(1263914..1264000) FT /locus_tag="VSAL_I1160" FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT /inference="protein motif:ProSite:PS00061" FT CDS 1264620..1265681 FT /transl_table=11 FT /gene="sohB" FT /locus_tag="VSAL_I1161" FT /old_locus_tag="TVS1048" FT /product="probable protease SohB" FT /EC_number="3.4.21.-" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EJI3" FT /db_xref="InterPro:IPR002142" FT /db_xref="InterPro:IPR013703" FT /db_xref="UniProtKB/TrEMBL:B6EJI3" FT /protein_id="CAQ78846.1" FT /translation="MEFLFDYGLFLAKIATVVVSIIAILVAAKAVSGKSTGAKGELEVT FT NLTEQYKETVADLEYHLFDDAELKARDKAEKKADKEAEKAKQKEIKQAAKAGTLELKRD FT ARLFVLDFKGSIDAKEVAGLREEVSAILAIAVEGDEVLLRLESGGGMVHGYGLASSQLD FT RLRDANITLTISVDKVAASGGYMMACIGEKIIAAPFAIVGSIGVVAQLPNFSKLLKRND FT IEFEQLTAGEYKRTLTMFGENSDKAREKFQLELEETHVLFKDFIHEHRADLDLEKVATG FT EHWFGKQALELGLIDAIQTSDDYVTQACKDREVLAIHYVQKKKLGAKIAGIAGQSAENV FT FMRMINIGQRPIV" FT misc_feature 1264620..1265105 FT /gene="sohB" FT /locus_tag="VSAL_I1161" FT /note="HMMPfam hit to PF08496, Peptidase family S49 FT N-terminal, score 1.3e-99" FT /inference="protein motif:HMMPfam:PF08496" FT misc_feature 1264638..1264703 FT /gene="sohB" FT /locus_tag="VSAL_I1161" FT misc_feature 1264701..1264724 FT /gene="sohB" FT /locus_tag="VSAL_I1161" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1265109..1265564 FT /gene="sohB" FT /locus_tag="VSAL_I1161" FT /note="HMMPfam hit to PF01343, Peptidase family S49, score FT 5.3e-50" FT /inference="protein motif:HMMPfam:PF01343" FT CDS complement(1265754..1265999) FT /transl_table=11 FT /locus_tag="VSAL_I1162" FT /old_locus_tag="TVS1049" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR019633" FT /db_xref="UniProtKB/TrEMBL:B6EJI4" FT /protein_id="CAQ78847.1" FT /translation="MSVKKSISEADLLLIANQIIQDHENYLEGMRATGVEEKEEVLVFK FT GEYFLSDQGLPTEKTTAVFNMFKYLAHQLSKEFTIK" FT CDS 1266064..1266192 FT /transl_table=11 FT /locus_tag="VSAL_I1163" FT /old_locus_tag="TVS1050" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EJI5" FT /protein_id="CAQ78848.1" FT /translation="MYIIVDKIKKSEEIELYCEQPQGIGPIFLSYLSVNANRCAAL" FT CDS 1266401..1269040 FT /transl_table=11 FT /gene="topA" FT /locus_tag="VSAL_I1164" FT /old_locus_tag="TVS1051" FT /product="DNA topoisomerase I (omega protein)" FT /EC_number="5.99.1.2" FT /db_xref="GOA:B6EJI6" FT /db_xref="InterPro:IPR000380" FT /db_xref="InterPro:IPR003601" FT /db_xref="InterPro:IPR003602" FT /db_xref="InterPro:IPR005733" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR013263" FT /db_xref="InterPro:IPR013497" FT /db_xref="InterPro:IPR013498" FT /db_xref="InterPro:IPR013824" FT /db_xref="InterPro:IPR013825" FT /db_xref="InterPro:IPR023405" FT /db_xref="InterPro:IPR023406" FT /db_xref="UniProtKB/TrEMBL:B6EJI6" FT /protein_id="CAQ78849.1" FT /translation="MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPMGSTSTG FT KKTAAASTKGMSVEDKARIKKERDKKNLINKMGIDPYNDWAANYQILPGKEKVVAELQK FT LAENADTIYLATDLDREGEAIAWHLREIIGGDDSRYKRVVFNEITKNAIQQAFETPGEL FT SMPGVNAQQARRFLDRVVGFMASPLLWKKVARGLSAGRVQSVAVKVLVEREREINAFIP FT EEFWDIHADTLTSGKENFRLQVAQRNGSVFKPLNQADTESAVSILEKAEYEVCKREDRP FT TKSKPSAPYITSTLQQAASTRLGYGVKKTMMLAQRLYEGGYITYMRTDSTNLSKEAVET FT LREFIGSEYGESYLPAAPIIYGSKEGAQEAHEAIRPSSVDVKVDDLQGMEADAHKLYNL FT IWNQFVSCQMTPAQYDSTTLSVKADEFTLKAKGRILKFDGWTRVQRPMGKNEDQLLPAV FT QLGDKLKLEQLDPKQHFTKPPARFTEAALVKELEKKGIGRPSTYASIISTIQDRGYVRV FT ESRRFYAEKMGEIVTDRLNQSFDDLMDYDFTARMEGNLDKIAEGSKDWKEVLNAFFQDF FT TDDIAKAELDESEGGMSPNNIVETDIKCPTCDRNMGIRTASTGVFLGCSGYALPPKERC FT KKTINLGNEEGIINVLEEDVETAALRAKKRCPKCETAMDPYLIDQDRKLHVCGNNPNCD FT GYIVEKGEFQLKGYDGPIVECDKCGSDMELKNGRFGKYMDCTSETCKNTRKILRNGDVA FT PPKEDPVHLPELECEKSDAYFVLRDGASGLFLAASTFPKSRETRAPLVEELVRFKDRLS FT PKFVYLTEAPTHDPDGKPAVIRFSRKTKENYVRTETDGKPSGWTALYLDGKWAVTDKRK FT KPKAEKES" FT misc_feature 1266407..1266838 FT /gene="topA" FT /locus_tag="VSAL_I1164" FT /note="HMMPfam hit to PF01751, Toprim domain, score FT 2.8e-32" FT /inference="protein motif:HMMPfam:PF01751" FT misc_feature 1266878..1268074 FT /gene="topA" FT /locus_tag="VSAL_I1164" FT /note="HMMPfam hit to PF01131, DNA topoisomerase, score FT 4.9e-165" FT /inference="protein motif:HMMPfam:PF01131" FT misc_feature 1267343..1267387 FT /gene="topA" FT /locus_tag="VSAL_I1164" FT /note="PS00396 Prokaryotic DNA topoisomerase I active FT site." FT /inference="protein motif:ProSite:PS00396" FT misc_feature 1268201..1268302 FT /gene="topA" FT /locus_tag="VSAL_I1164" FT /note="HMMPfam hit to PF01396, Topoisomerase DNA binding C4 FT zinc fing, score 0.0016" FT /inference="protein motif:HMMPfam:PF01396" FT misc_feature 1268534..1268647 FT /gene="topA" FT /locus_tag="VSAL_I1164" FT /note="HMMPfam hit to PF01396, Topoisomerase DNA binding C4 FT zinc fing, score 5.4e-08" FT /inference="protein motif:HMMPfam:PF01396" FT misc_feature 1268681..1268803 FT /gene="topA" FT /locus_tag="VSAL_I1164" FT /note="HMMPfam hit to PF08272, Topoisomerase I FT zinc-ribbon-like, score 1.3e-15" FT /inference="protein motif:HMMPfam:PF08272" FT misc_feature 1268882..1269007 FT /gene="topA" FT /locus_tag="VSAL_I1164" FT /note="HMMPfam hit to PF08272, Topoisomerase I FT zinc-ribbon-like, score 5.8e-19" FT /inference="protein motif:HMMPfam:PF08272" FT CDS 1269222..1270157 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1165" FT /old_locus_tag="TVS1052" FT /product="putative sodium/sulfate symporter (fragment)" FT /note="Similar to Vibrio fischeri Transporter, divalent FT anion:sodium symporter family UniProt:Q5E5Z9 (486 aa) fasta FT scores: E()=4.5e-101, 93.691% id in 312 aa. CDS is FT truncated by the insertion of the downstream IS element and FT subsequent recombination events" FT /inference="similar to sequence:UniProt:Q5E5Z9" FT misc_feature 1269240..1270157 FT /locus_tag="VSAL_I1165" FT /note="HMMPfam hit to PF00939, Sodium:sulfate symporter FT transmembrane, score 6.8e-05" FT /inference="protein motif:HMMPfam:PF00939" FT misc_feature order(1269258..1269326,1269363..1269431,1269525..1269593, FT 1269654..1269707,1269720..1269773,1269792..1269860, FT 1269918..1269986,1270050..1270103) FT /locus_tag="VSAL_I1165" FT repeat_region complement(1270158..1271596) FT /note="VSa9" FT CDS complement(1270324..1271517) FT /transl_table=11 FT /locus_tag="VSAL_I1166" FT /old_locus_tag="TVS1053" FT /product="transposase" FT /db_xref="GOA:B6EIP3" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EIP3" FT /protein_id="CAQ78851.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS join(1271615..1271797,1271801..1272178) FT /pseudo FT /transl_table=11 FT /gene="vasU-1" FT /locus_tag="VSAL_I1167" FT /old_locus_tag="TVS1054" FT /product="putative type VI secretion protein VasU-1 FT (pseudogene)" FT /note="Similar to Solibacter usitatus Twin-arginine FT translocation pathway signal UniProt:Q43WS8 (193 aa) fasta FT scores: E()=1.2e-18, 37.931% id in 174 aa. CDS contains a FT nonsense mutation (TAA) after codon 80. The sequence has FT been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ78852.1" FT /inference="similar to sequence:UniProt:Q43WS8" FT CDS 1272188..1272484 FT /transl_table=11 FT /gene="vasV-1" FT /locus_tag="VSAL_I1168" FT /old_locus_tag="TVS1056" FT /product="putative type VI secretion protein VasV-1, PAAR FT domain protein" FT /db_xref="InterPro:IPR008727" FT /db_xref="UniProtKB/TrEMBL:B6EJI9" FT /protein_id="CAQ78853.1" FT /translation="MLPAARATDMHMCPMQTPVVVPIPHVGGPLLPFPTTVLIGSLPAA FT TLGQMCICIGPPDSIIKGSATVLINNKPAARMGDMTAHGGTIIMGMPTVLIGG" FT misc_feature 1272263..1272364 FT /gene="vasV-1" FT /locus_tag="VSAL_I1168" FT /note="HMMPfam hit to PF05488, PAAR motif, score 1.3" FT /inference="protein motif:HMMPfam:PF05488" FT misc_feature 1272317..1272352 FT /gene="vasV-1" FT /locus_tag="VSAL_I1168" FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT /inference="protein motif:ProSite:PS00070" FT misc_feature 1272365..1272454 FT /gene="vasV-1" FT /locus_tag="VSAL_I1168" FT /note="HMMPfam hit to PF05488, PAAR motif, score 3.8e-07" FT /inference="protein motif:HMMPfam:PF05488" FT CDS 1272880..1274265 FT /transl_table=11 FT /gene="vasJ-1" FT /locus_tag="VSAL_I1169" FT /old_locus_tag="TVS1057" FT /product="putative type VI secretion protein VasJ-1" FT /note="Weakly similar to Rhizobium leguminosarum bv. FT trifolii ImpA UniProt:Q93ED3 (358 aa) fasta scores: FT E()=0.0033, 23.618% id in 398 aa. Operon structure similar FT to Rhizobium leguminosarum bv. trifolii operon harbouring FT putative temperature-dependent protein secretion proteins. FT Expression may be regulated by Fur" FT /db_xref="InterPro:IPR010657" FT /db_xref="UniProtKB/TrEMBL:B6EJJ0" FT /inference="similar to sequence:UniProt:Q93ED3" FT /protein_id="CAQ78854.1" FT /translation="MRFTQKNILEFQTPIAEDLICGVYLKLDKGAFRPLRNEFNVAQTS FT LRKLSQNPSSQELESLQDENYENWQVLSTSLMTTFENVTRDIELIGWFITSQILLDNSL FT SSVAYSMNWFAELLAEQWDSINPVLPEEKLKGDSDTGRLVEQYGAKVKAFFQLLGDSEE FT SSLLYTPLLLLPLVGHVTFYDFQSAERKGELSQLEQQATSLITFDRNGVRQRLESVADC FT LFQIERLITITKTYAQIAGVNAPNFNFVKTLFTKYNNALQQLSGMKAEVKVTSTSHKEK FT QRLINQSVNTETCGENVLLVEAVSQASDSSIPLRLTADNLSQVGLANSMNRDLAFHLLR FT EVSSYFRQSEPHSPVSFLLEKAIRWGYLSLPELLQEMMVEQDGDNVNKIFNASGLNHSE FT QILLPEVGIPPCVIEKTLTFTESSSFSEPVNIEAKVAQVSINDTELKQNEDESSSRPTA FT LRW" FT CDS 1274426..1274818 FT /transl_table=11 FT /gene="hcp-3" FT /locus_tag="VSAL_I1170" FT /old_locus_tag="TVS1059" FT /product="hemolysin-coregulated protein Hcp-3" FT /db_xref="InterPro:IPR008514" FT /db_xref="UniProtKB/TrEMBL:B6EJJ1" FT /protein_id="CAQ78855.1" FT /translation="MDIGNGNNADGGMVALSEINLSKQVDGASEDLLSYLFNPGKEGKT FT VEIAFTKPEADGSGAKLYFQVKLSKARLVSYNVAGTDGSQPQENIALSYVEIAQKHNYE FT LDGGEIKDGGIVSYNLPQGKLLSGAQ" FT CDS 1274890..1275399 FT /transl_table=11 FT /gene="vasQ-1" FT /locus_tag="VSAL_I1171" FT /old_locus_tag="TVS1060" FT /product="putative type VI secretion protein VasQ-1" FT /note="Operon structure similar to Rhizobium leguminosarum FT bv. trifolii operon harbouring putative FT temperature-dependent protein secretion proteins" FT /db_xref="InterPro:IPR008312" FT /db_xref="UniProtKB/TrEMBL:B6EJJ2" FT /protein_id="CAQ78856.1" FT /translation="MALNSQHKRVSKNRVSITYDVETNGAVETKELPFVVGVIGDFSGH FT KSESEKVDLEEREFTSIDKDNFDMVMGQVAPTLSYKVDNKLASDESQFEVNMNFSSMKD FT FHPESVVEQIDPLKKLVETRNQLKVLLSKADRSRDLERLLKEILQSTDAIQGLAQELGL FT NNEGAE" FT misc_feature 1274899..1275381 FT /gene="vasQ-1" FT /locus_tag="VSAL_I1171" FT /note="HMMPfam hit to PF05591, Protein of unknown function FT (DUF770), score 2.8e-62" FT /inference="protein motif:HMMPfam:PF05591" FT CDS 1275399..1276880 FT /transl_table=11 FT /gene="vasRA-1" FT /locus_tag="VSAL_I1172" FT /old_locus_tag="TVS1061" FT /product="putative type VI secretion protein VasRA-1" FT /note="Operon structure similar to Rhizobium leguminosarum FT bv. trifolii operon harbouring putative FT temperature-dependent protein secretion proteins" FT /db_xref="InterPro:IPR010269" FT /db_xref="InterPro:IPR022272" FT /db_xref="UniProtKB/TrEMBL:B6EJJ3" FT /protein_id="CAQ78857.1" FT /translation="MSTEQQITPEGTIEAGITISILDRAITATAQTPVDTTKELLSILT FT SQVLDGTVTWDKNLTLTIEKAINAIDTKISEQLSSVMQNRDFQKLEGTWLGLQKLVKNS FT DLGADLKIKLADYTKDELLEQFEDAPAIDRSRFFNMVYQEEFGTAGGQPYGALIGDYEF FT GYGDEDVALLRYMGEVASASHAPFIAAASASMFDFTTYATFSDGKPVAAGFDSPAYVSW FT NAFRASDDSRYVALTLPKTIARQPYGAQTVLVKSFDFEELKTRDNGQQIVGSDEDFVWS FT NAAYEFGLLLTRSFTEFGWCTAVRGTESGGKVESLPSFAYYSDAGDLLQQCPTEVNLTD FT EREKELSELGFLPLVHYKNTNYAVFMGAQTAHKPRGSLDPDAMANAAISARLPYTMASS FT RIAQCLKVMGRDLIGSNIDPKDVEKDLNAWIHKDVNPNAIGNESKARHPLVEAKVTVEE FT QAGRPGAYSAVAYLRPWLQMEELSTSLRMVANIPS" FT misc_feature 1275453..1276877 FT /gene="vasRA-1" FT /locus_tag="VSAL_I1172" FT /note="HMMPfam hit to PF05943, Protein of unknown function FT (DUF877), score 1.2e-221" FT /inference="protein motif:HMMPfam:PF05943" FT misc_feature 1275648..1275689 FT /gene="vasRA-1" FT /locus_tag="VSAL_I1172" FT /note="PS00213 Lipocalin signature." FT /inference="protein motif:ProSite:PS00213" FT CDS 1276930..1278291 FT /transl_table=11 FT /gene="vasRB-1" FT /locus_tag="VSAL_I1173" FT /old_locus_tag="TVS1062" FT /product="putative type VI secretion protein VasRB-1" FT /note="Operon structure similar to Rhizobium leguminosarum FT bv. trifolii operon harbouring putative FT temperature-dependent protein secretion proteins" FT /db_xref="InterPro:IPR010269" FT /db_xref="UniProtKB/TrEMBL:B6EJJ4" FT /protein_id="CAQ78858.1" FT /translation="MNTINQSITMQSELICLPWEELLSLSQKGKTAQFKVLITKLIANL FT DRVISEQLSTVMQDKHFKKLEASWLDLQLLTEKQVSSRRVKVKILDLSWSMVSDDLNYS FT FEIKQTALFKRLYANEFDTGGGTPFGLVVIDHKITSDYGEDEDHDDLYTLQLLSELAER FT SLCPVVLGVDEFFFGDDPNRQLHDNVRVKRILDSRDFLSWQLLRDKASSRFLHLVLPEY FT LQRRPYQNYAAGFIFTESNYRDNALWGNSAYLLAGNVIQEFERISWFGFLRSYNETGTY FT GAIIQHDLSLTAKVDIYNEDDGFWAEQGFVPLSSLYLTEQKGFFSNQSVWKASTEELQM FT LGTLQTNLMACRFGHYIKAQLRDQIGRYDSMEDCKRGLENWLKSYISEVDYGEDSVMAR FT YPLKASEVRIKEDSQDSTRYLCEIMLQPQYQYEMMDAQVLLTTSMPDQAVGGSA" FT misc_feature 1276930..1278267 FT /gene="vasRB-1" FT /locus_tag="VSAL_I1173" FT /note="HMMPfam hit to PF05943, Protein of unknown function FT (DUF877), score 2.7e-18" FT /inference="protein motif:HMMPfam:PF05943" FT CDS 1278288..1278710 FT /transl_table=11 FT /gene="vasS-1" FT /locus_tag="VSAL_I1174" FT /old_locus_tag="TVS1063" FT /product="putative type VI secretion protein VasS-1" FT /db_xref="GOA:B6EJJ5" FT /db_xref="InterPro:IPR007048" FT /db_xref="InterPro:IPR015801" FT /db_xref="UniProtKB/TrEMBL:B6EJJ5" FT /protein_id="CAQ78859.1" FT /translation="MSLMAKLTQSWTNDVDAVRDAIIDNICDLISSRAPIWPTLESSDE FT LADTIAYSGLRNMTRAQSKSNSDVIIVDITHLIRCYEPRLIDVLIEVEEKEKSKNQLQF FT RISATMLSDQGEEAIVLNSFLDLSRNILDVRKSNFV" FT misc_feature 1278288..1278671 FT /gene="vasS-1" FT /locus_tag="VSAL_I1174" FT /note="HMMPfam hit to PF07025, Protein of unknown function FT (DUF1316), score 3e-07" FT /inference="protein motif:HMMPfam:PF07025" FT CDS 1278703..1280484 FT /transl_table=11 FT /gene="vasA-1" FT /locus_tag="VSAL_I1175" FT /old_locus_tag="TVS1064" FT /product="putative type VI secretion protein VasA-1" FT /note="Operon structure similar to Rhizobium leguminosarum FT bv. trifolii operon harbouring putative FT temperature-dependent protein secretion proteins" FT /db_xref="InterPro:IPR010272" FT /db_xref="UniProtKB/TrEMBL:B6EJJ6" FT /protein_id="CAQ78860.1" FT /translation="MSDTLLTYFEQELRFIREEASYFSARHPGATEALGIRKDSIDDPQ FT ISRLIESVAFLNGRLQQRLDDSFPEFTESLIRLLFPHYLRPIPSYSLLDFVVNNDTNAT FT HHIPSGTEFEVRDEQINSAIFRTTEEVALYPLKIERVNVSFAPFELEKPKGAEQSNALI FT EISISTVDDTVVLSELLIESLKLHFKGETNFALRLFDLLSQGTSQICVSAQGKSYELSR FT NAMKPVGFEVNDTILPYQAASFGGFKLLTEFFMFSERFNGFHFNFGDVLKQIDSHQFKL FT QIFIDELSVDFARSLSAERFSLFTTPIVNLHQMVSDPLDVDFFKKQYPIILDANQGHNL FT ELFSVDEVMDVTQVEPTKIAQIYGEKFNGSESGLRWQLVQTLHENGLLESALKVADLEH FT ISAESESQTWLVNATVTDGMVTSHLSLLSEIECRESLTIPADIQLLRRPSLPMRSKETN FT KNVWTLLCHLHFNYHSILGSDDPVETLKNVFDLYNHNQNPQNYAYIESVTTIEQEQVVA FT PIRISGKTCFAYGTKITITLDPTNVNGGICLFGHILERFFAYFAGFNSFTQVNIKLKGQ FT DELYMAFPRRSGCKILL" FT misc_feature 1278706..1280481 FT /gene="vasA-1" FT /locus_tag="VSAL_I1175" FT /note="HMMPfam hit to PF05947, Bacterial protein of unknown FT function (DUF87, score 9.9e-88" FT /inference="protein motif:HMMPfam:PF05947" FT CDS 1280466..1281449 FT /transl_table=11 FT /gene="vasB-1" FT /locus_tag="VSAL_I1176" FT /old_locus_tag="TVS1065" FT /product="putative type VI secretion protein VasB-1" FT /db_xref="InterPro:IPR010732" FT /db_xref="UniProtKB/TrEMBL:B6EJJ7" FT /protein_id="CAQ78861.1" FT /translation="MQNFVVVRLNNNQQDVELDKAWQLFKHQAEHNGVRPNIAFSAEQL FT PAYYQTQVTEVYRNNIGNYVIKTPLAALSGCKGTIPRQMYRQVLSAQFDLGDEAPVDFF FT DVFNNRYFRLYCQAELKHDLSSQAEEETFTWNLHQQSLTTMLSSLCGLGENNSAIPKQD FT LIQYTGLLGLKLTCPFALKLLLEDYFDAEFVIKTSELEYQPLTPCTLTQLGKIGQNRQL FT GMGALVGKSAPMVGQKLHIKVCPRNYSHYIKIRSDRKMISAIEHLVRSYMGINIKYKLY FT MKVDSRYLPRVQLTSNADKGLKVGQSAWMNSRLNKQQHVEMLLTTS" FT CDS 1281456..1284074 FT /transl_table=11 FT /gene="vasG-1" FT /locus_tag="VSAL_I1177" FT /old_locus_tag="TVS1066" FT /product="chaperone ClpB-1" FT /db_xref="GOA:B6EJJ8" FT /db_xref="InterPro:IPR001270" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR013093" FT /db_xref="InterPro:IPR017729" FT /db_xref="InterPro:IPR018368" FT /db_xref="InterPro:IPR019489" FT /db_xref="InterPro:IPR023150" FT /db_xref="UniProtKB/TrEMBL:B6EJJ8" FT /protein_id="CAQ78862.1" FT /translation="MINIELQSLVKRLTPGMKASLEAAAGECVQRGHFSIEFEHWFVQL FT LQQPTVGWQKAVEQTGMASESILEQLNNHLSSLPRGNDSAPSLSPQLVELLKDAWMIGS FT LNHAQLSMNEFHVLIVLKQRIEQGAYNGALSTWIKSLSSEWLNRQSITKTASSHLSSTS FT MLCGKNQGMEGNMSTPALDKYSQNLTQAARNGDLDPISGRGNEIRKAIDILCRRRQNSP FT ILVGDPGVGKTAIVEGLAQQIVDGNVPPALKNVELRNLDLSLLQAGASIKGEFENRLKD FT VINEIKQSATPIIVFIDEAHTLIGAGGAAGQNDAANILKPALARGEFRSIAATTWAEYK FT QYFESDAALSRRFQVVSIGEPSEGDAIHMLSGVKTCLEKHHNVKVMQEAINAAVSLSIR FT YLPERKLPDKAISLLDTACSRIGLSQSAPPRQLEAVAEQICYVENEITTLNHEAALWSI FT DDDRLEQVQQRLIDLQEQHQEIGKCWEQEKTLVEEIIVLQTKLDEQFLNGDDLSENEDK FT FLLAIKMTELHAIQDDQPLVLPQVNEQTIAEVISLWTGIPVGNMLKEEVEHLMHLEKHI FT GERVIGQIAPIAEISKAIRMSRAGLTDLRKPVGVFLMCGPSGVGKTETALALTDLLYGG FT KRNITTINMTEFKEEHKVSTLLGSPAGYVGYGKGGVLTEAVRKNPYSVLLLDEMEKAHP FT GVHDIFYQIFDKGSISDSEGREVDFRNTIIIMTSNAADSAVVNGCADGRPSISILTKAI FT FPELQNFFKPAFLGRTTIVPYFPLNDEEMSKIAQLSLRRIEKRIKQHYNATFDYDTQVI FT ELLVSMNQSPETGARAIEQLINRQLMPELANQCIVRMSQSQPISEVLLTVNGNKFQIDI FT K" FT misc_feature 1282116..1282724 FT /gene="vasG-1" FT /locus_tag="VSAL_I1177" FT /note="HMMPfam hit to PF00004, ATPase family associated FT with various cellul, score 1.1e-10" FT /inference="protein motif:HMMPfam:PF00004" FT misc_feature 1282131..1282154 FT /gene="vasG-1" FT /locus_tag="VSAL_I1177" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1282395..1282433 FT /gene="vasG-1" FT /locus_tag="VSAL_I1177" FT /note="PS00870 Chaperonins clpA/B signature 1." FT /inference="protein motif:ProSite:PS00870" FT misc_feature 1283271..1283771 FT /gene="vasG-1" FT /locus_tag="VSAL_I1177" FT /note="HMMPfam hit to PF07724, ATPase family associated FT with various cellul, score 4.4e-79" FT /inference="protein motif:HMMPfam:PF07724" FT misc_feature 1283283..1283786 FT /gene="vasG-1" FT /locus_tag="VSAL_I1177" FT /note="HMMPfam hit to PF07728, ATPase family associated FT with various cellul, score 2.1e-05" FT /inference="protein motif:HMMPfam:PF07728" FT misc_feature 1283298..1283321 FT /gene="vasG-1" FT /locus_tag="VSAL_I1177" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1284155..1284313 FT /transl_table=11 FT /gene="vasV-1" FT /locus_tag="VSAL_I1178" FT /old_locus_tag="TVS1067" FT /product="putative type VI secretion protein VasV-1" FT /db_xref="UniProtKB/TrEMBL:B6EJJ9" FT /protein_id="CAQ78863.1" FT /translation="MVTVILDNKHLFWYEIQAVGLPAASFIAIGVEEDFLNERNQHQLD FT LFFEIIC" FT CDS 1284376..1285320 FT /transl_table=11 FT /gene="vasC-1" FT /locus_tag="VSAL_I1179" FT /old_locus_tag="TVS1068" FT /product="putative type VI secretion protein VasC-1" FT /note="Contains phospho-specific protein-protein FT interaction motif FHA" FT /db_xref="InterPro:IPR000253" FT /db_xref="InterPro:IPR008984" FT /db_xref="UniProtKB/TrEMBL:B6EJK0" FT /protein_id="CAQ78864.1" FT /translation="MPISIRIISSPDGESISEWNKLLPEEGGSIGRAFGASIQLSDAIR FT EVSASHAIIKKTSRGYQIIDDSTNGLFINGSDKPLGLSNQTALNDGDILDIGRYRLLVS FT CFVPEQAQIQDFSTLSEDFSLGGDPFNISEVEPSFSSSFVHKEPELDFAFSDCNIIGDN FT PFNIEDIKKVQEHKEVNLSFVALDDDPFSGSELQLNLPLESKEGKASIQESADDKYAFI FT VDQKSEERTQLHMNRALEMALTRLLSDISPHAMEDMFDEISRPSFFSGVPKYWDMYKRY FT FTRQVENKDWQIKFHAYFHDAIRLQRNLERGNK" FT misc_feature 1284457..1284666 FT /gene="vasC-1" FT /locus_tag="VSAL_I1179" FT /note="HMMPfam hit to PF00498, FHA domain, score 3.7e-08" FT /inference="protein motif:HMMPfam:PF00498" FT CDS 1285317..1285781 FT /transl_table=11 FT /gene="vasD-1" FT /locus_tag="VSAL_I1180" FT /old_locus_tag="TVS1069" FT /product="putative type VI secretion protein VasD-1" FT /db_xref="InterPro:IPR017734" FT /db_xref="UniProtKB/TrEMBL:B6EJK1" FT /protein_id="CAQ78865.1" FT /translation="MRKWLMSSIVVLLLSGCSFSGEEFTPQVVLNIKAASNINPNVEGK FT PSPLELRVYQLTDSQAFSQADFIQIYNDEQGVLKAELLLARQLESILPGETRQEVFPLA FT AETKYIGVIAEFAAYREAKNKVIYKPIILGITAINIEVDGINLSVSGEEE" FT sig_peptide 1285317..1285376 FT /gene="vasD-1" FT /locus_tag="VSAL_I1180" FT misc_feature 1285335..1285367 FT /gene="vasD-1" FT /locus_tag="VSAL_I1180" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1285784..1287100 FT /transl_table=11 FT /gene="vasE-1" FT /locus_tag="VSAL_I1181" FT /old_locus_tag="TVS1070" FT /product="putative type VI secretion protein VasE-1" FT /note="Operon structure similar to Rhizobium leguminosarum FT bv. trifolii operon harbouring putative FT temperature-dependent protein secretion proteins" FT /db_xref="InterPro:IPR010263" FT /db_xref="UniProtKB/TrEMBL:B6EJK2" FT /protein_id="CAQ78866.1" FT /translation="MDNKKVVWSEGMFLSPQHFQQQTRYIEHLTREFTEQIAPQGSGLT FT LLELDRSMLNIGKVSVRRARGIFQDGTPFEINRGLVLDIPKNTNHKKVYLALSVSRPGA FT VDVGANQHLRHSSVDHPVFDTSREHCESVLLEIAELNIVLKLEDEELQDYTLISVCEVI FT EHKSEGAVLLNQAFVPHCLQFGVSNYLKDSVADVLAQVQYRVMTISTRLQTENDSKSYQ FT AMMRDYLWLQALGAWMPKLQQWNQDGSLLTKHLYLECLSMAGQMQGLEGKMPKDSLVWD FT QNNLYSIFSVIFSELLVLLREVQIDNLTTLSWDKQLFVSRRLLRTLVKDRSLYNEGRFI FT LVATSPLGASRLSEEFPKAIKLAGNSDIAGLVRNALSGVGLRNLPYAPSELKSKHDAAY FT FEIDTKSELWQALVKNDEPIALHIDDRIEDVHVEFHVIR" FT misc_feature 1285793..1287097 FT /gene="vasE-1" FT /locus_tag="VSAL_I1181" FT /note="HMMPfam hit to PF05936, Bacterial protein of unknown FT function (DUF87, score 4.7e-34" FT /inference="protein motif:HMMPfam:PF05936" FT CDS 1287108..1288232 FT /transl_table=11 FT /gene="vasF-1" FT /locus_tag="VSAL_I1182" FT /old_locus_tag="TVS1071" FT /product="putative type VI secretion protein VasF-1" FT /db_xref="InterPro:IPR017732" FT /db_xref="UniProtKB/TrEMBL:B6EJK3" FT /protein_id="CAQ78867.1" FT /translation="MSELFNDEATIELRHTKEKIPAKKKNAELKDIDLLGAEWLIDNLS FT VYNSSLLNSATELFAILVTLSRQGEPRDINRFRQRLLDEISVFRQRGAHLEYHPSIIEK FT SCFVLCAAFDEAILYTQWGESARWENHSLLSKVFSQRNGGEAFFTLLDKASQQPAKLVD FT FLELQYVLLMLGFKGRFRHDNENVLHEIQSNVYSIIRHYRSESVLPVPKIPELIEGKQP FT WLMLSMSKTLVIAFFITIIVYGASEYWYFNRSQPILAQFNAINTSSVGKKNNKELINIS FT SGSDIGKIVDNRKQELKETLQWEVVLAAFTRSLDAVRLVSELQQAGYEPFTRETDHGVE FT LYIRAGDNLSVIRKLKNELNIRFDLNATIKRAQI" FT misc_feature 1287801..1287860 FT /gene="vasF-1" FT /locus_tag="VSAL_I1182" FT CDS join(1288234..1290648,1292094..1293113) FT /pseudo FT /transl_table=11 FT /gene="vasK-1" FT /locus_tag="VSAL_I1183" FT /old_locus_tag="TVS1072" FT /product="putative type VI secretion protein VasK-1 FT (pseudogene)" FT /note="Similar to Vibrio cholerae IcmF-related protein FT UniProt:Q9KN45 (1181 aa) fasta scores: E()=1.9e-32,22.852% FT id in 1199 aa. CDS is disrupted by the insertion of an IS FT element after codon 805" FT /db_xref="PSEUDO:CAQ78868.1" FT /inference="similar to sequence:UniProt:Q9KN45" FT sig_peptide 1288234..1288314 FT /gene="vasK-1" FT /locus_tag="VSAL_I1183" FT misc_feature order(1288252..1288311,1288339..1288392,1289461..1289529) FT /gene="vasK-1" FT /locus_tag="VSAL_I1183" FT misc_feature 1289641..1290540 FT /gene="vasK-1" FT /locus_tag="VSAL_I1183" FT /note="HMMPfam hit to PF06761, ImcF-related, score 1e-22" FT /inference="protein motif:HMMPfam:PF06761" FT repeat_region 1290656..1292067 FT /note="VSa1" FT repeat_region 1290656..1290674 FT /note="IR of VSa1" FT CDS 1290747..1292054 FT /transl_table=11 FT /locus_tag="VSAL_I1184" FT /old_locus_tag="TVS1074" FT /product="transposase" FT /db_xref="GOA:B6EJK5" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR024473" FT /db_xref="UniProtKB/TrEMBL:B6EJK5" FT /protein_id="CAQ78869.1" FT /translation="MDVSQALNIINDWKPSNVETLADLLPIHLIDEAYSLTDTVTMRKR FT KLTLESMVWLLVGMAIYNNKSMKDLVNQLDIVDRTGKAFVAPSALTQRRKNLGEAAMKA FT VFERMTSSWLKSANLPKWNGLTLLGVDGVVWRAPDNQKNEEAFSRQKGTQYPQVRMVCQ FT MELSSHLITASAFDNYNTNEMILAEKLIDSTPDHSVTMFDKGFYSLGLLHKWQMTGSER FT HWLIPLKKNTQYEIIRSLGRNDKLVILRSNPRARKLFSNLPETMTARLVTRKIKGKDYQ FT VLTSMIDPLRYPLKDIVGLYEHRWEIELGYREQKQYMLGNRLTLRSRLPELVKQELWGI FT LLTYNLIRYQMVELCFNLKGNYLPYQLSFNGTLAHVSALLVGLPYSTPGAIPRQLKGFH FT QMAESLILDRRRERTFPRMVKPRPQRYARNKNAIHP" FT misc_feature 1291235..1291784 FT /locus_tag="VSAL_I1184" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 6.6e-10" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 1292049..1292067 FT /note="IR of VSa1" FT misc_feature 1292316..1292690 FT /gene="vasK-1" FT /locus_tag="VSAL_I1183" FT /note="HMMPfam hit to PF06744, Protein of unknown function FT (DUF1215), score 5.9e-34" FT /inference="protein motif:HMMPfam:PF06744" FT CDS 1293110..1293727 FT /transl_table=11 FT /gene="vasX-1" FT /locus_tag="VSAL_I1185" FT /old_locus_tag="TVS1076" FT /product="putative type VI secretion protein VasX-1" FT /note="Serine/Threonine protein kinase domain" FT /db_xref="GOA:B6EJK6" FT /db_xref="InterPro:IPR000719" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR017442" FT /db_xref="InterPro:IPR020636" FT /db_xref="UniProtKB/TrEMBL:B6EJK6" FT /protein_id="CAQ78870.1" FT /translation="MSSKEFFTYKSFFHCFLLDGENWDLSKIGKHYINSKDMEREWEAV FT NECAGLYVQKPLSLDVMNSVIYFEYDSTAKPLSSFDKNNAKQFLWILPKIIRAIKHCHD FT KGWVHGDIKPSNILFIPALTSIRLIDFGASYRIGTSRKTLSCWQATPSFASPSQLQGKG FT LVKKEDDWYALTKIIDQLIDIEIEPRIQKKAMYIRNVLMNWV" FT CDS complement(1293881..1294516) FT /transl_table=11 FT /locus_tag="VSAL_I1186" FT /old_locus_tag="TVS1077" FT /product="putative lysine exporter protein" FT /db_xref="GOA:B6EJK7" FT /db_xref="InterPro:IPR001123" FT /db_xref="UniProtKB/TrEMBL:B6EJK7" FT /protein_id="CAQ78871.1" FT /translation="MIDISILPVYLTAVIALLLLPGPDMLLIASSSMSYGRKVGLFASL FT GNATSGIILTLLAALGVSTLIAMSPLALKALHLLGGIYLLKMGWDCIRAQADEAPELAD FT SSKMATTFYQRALVSNLLNPKALVFFVMFLPQFVSTNIAATSGEQMLALGLLLNVLGLL FT FNLLLVALVGSLGKSLINNIKFRTYQHKFMGGIFIILALWMLSTFFIA" FT misc_feature complement(order(1293887..1293955,1293992..1294060, FT 1294103..1294171,1294298..1294366,1294430..1294498)) FT /locus_tag="VSAL_I1186" FT misc_feature complement(1293893..1294474) FT /locus_tag="VSAL_I1186" FT /note="HMMPfam hit to PF01810, LysE type translocator,score FT 2.5e-24" FT /inference="protein motif:HMMPfam:PF01810" FT CDS 1294730..1295566 FT /transl_table=11 FT /locus_tag="VSAL_I1187" FT /old_locus_tag="TVS1078" FT /product="transcriptional regulator, AraC-family" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EJK8" FT /db_xref="InterPro:IPR003313" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:B6EJK8" FT /protein_id="CAQ78872.1" FT /translation="MMNDEKVKKEIAHYQVAEELGGLEILNADYEKQTFSRHSHEGYTI FT GVIERGAQHFYRTGGNHTAPQDSIILINADDIHSGHSATDGGWGYKAMYPLPEQLESLS FT RELSYGQVGAPYFPEPVVYDSELANQLRLVFTMLDQSDNRLLRETLVYGVLVKLMCKHS FT KARYTDVTISKAQKPLYLIKEFLDDFPQADISLEDLSQLSNLSAYHLVRSFQKTFGLPP FT HSYQIQSRLRMARKLLKQGHSLSDTAQETGFYDQSHLHRHFKKAMGITPGQYLKLF" FT misc_feature 1294787..1295212 FT /locus_tag="VSAL_I1187" FT /note="HMMPfam hit to PF02311, AraC-like ligand binding FT domain, score 1.2e-32" FT /inference="protein motif:HMMPfam:PF02311" FT misc_feature 1295270..1295410 FT /locus_tag="VSAL_I1187" FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix pr, score 2.4e-05" FT /inference="protein motif:HMMPfam:PF00165" FT misc_feature 1295309..1295374 FT /locus_tag="VSAL_I1187" FT /note="Predicted helix-turn-helix motif with score 990.000, FT SD 2.56 at aa 194-215, sequence ISLEDLSQLSNLSAYHLVRSFQ" FT misc_feature 1295417..1295542 FT /locus_tag="VSAL_I1187" FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT misc_feature 1295426..1295557 FT /locus_tag="VSAL_I1187" FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix pr, score 4.3e-10" FT /inference="protein motif:HMMPfam:PF00165" FT CDS 1295639..1296352 FT /transl_table=11 FT /locus_tag="VSAL_I1188" FT /old_locus_tag="TVS1079" FT /product="putative branched-chain amino acid transport FT protein" FT /db_xref="InterPro:IPR011606" FT /db_xref="UniProtKB/TrEMBL:B6EJK9" FT /protein_id="CAQ78873.1" FT /translation="MDINTAVQPCSNSRLFWQGTFAMIPLSIAVLPWGLLAGSFAIDVG FT LTPFEGQALSAILFAGSAQLVAMGMIKAGAGLTTMLLTTFFITSRHFLYRVSMRDKISP FT LPLRWRLSLGFLLTDELFAVCGHQSKKQFNRWYALGAGFSFYFFWNVATLAGIIASSYL FT PSLNELGLEFAVVATFIAIVVPTIKNIPVLVSVLSALVLSVVLNYFSVEGSLMIASIGG FT MCLGYLTETLRGGRS" FT misc_feature order(1295696..1295764,1295837..1295905,1296044..1296112, FT 1296155..1296223,1296236..1296304) FT /locus_tag="VSAL_I1188" FT misc_feature 1295708..1296130 FT /locus_tag="VSAL_I1188" FT /note="HMMPfam hit to PF03591, AzlC protein, score 1.2e-59" FT /inference="protein motif:HMMPfam:PF03591" FT CDS 1296349..1296669 FT /transl_table=11 FT /locus_tag="VSAL_I1189" FT /old_locus_tag="TVS1080" FT /product="putative branched-chain amino acid transport FT protein" FT /db_xref="InterPro:IPR008407" FT /db_xref="UniProtKB/TrEMBL:B6EJL0" FT /protein_id="CAQ78874.1" FT /translation="MIFLSILAMTTLVFLSRYLFLEPKLPLRLNAQTQRLLSYSSPAVL FT TAIWAPIVFMPNNELSLSGSNPYLWAALIAAVIAWKTKNVLLTTIVSMVVFLVLNLWVF FT IG" FT sig_peptide 1296349..1296411 FT /locus_tag="VSAL_I1189" FT misc_feature order(1296352..1296411,1296454..1296513,1296532..1296588, FT 1296601..1296660) FT /locus_tag="VSAL_I1189" FT misc_feature 1296352..1296651 FT /locus_tag="VSAL_I1189" FT /note="HMMPfam hit to PF05437, Branched-chain amino acid FT transport protein, score 7.4e-34" FT /inference="protein motif:HMMPfam:PF05437" FT CDS complement(1296672..1297286) FT /transl_table=11 FT /locus_tag="VSAL_I1190" FT /old_locus_tag="TVS1081" FT /product="putative fumarylacetoacetate hydrolase" FT /db_xref="GOA:B6EJL1" FT /db_xref="InterPro:IPR002529" FT /db_xref="InterPro:IPR011234" FT /db_xref="UniProtKB/TrEMBL:B6EJL1" FT /protein_id="CAQ78875.1" FT /translation="MNTIRIGEKRITPSKLLCVGRNYHAHINELNNAVPEQMVVFNKPN FT SCISSTLSSFHQETLHYEAEICFLIENGQLSAVAVGLDLTKRELQSYLKKKGLPWERAK FT AFNGSALFSRFIPLDTIDINALQIELFINSMRVQCGNVSQMIYSPEAILTDLQSYTQLY FT DGDVIMSGTPQGVGEIHCGDIFLSRLKSGDKTLIETEWVAR" FT misc_feature complement(1296744..1297199) FT /locus_tag="VSAL_I1190" FT /note="HMMPfam hit to PF01557, Fumarylacetoacetate (FAA) FT hydrolase fam, score 5.8e-15" FT /inference="protein motif:HMMPfam:PF01557" FT CDS 1297498..1298334 FT /transl_table=11 FT /locus_tag="VSAL_I1191" FT /old_locus_tag="TVS1082" FT /product="HTH-type transcriptional regulator, AraC family" FT /db_xref="GOA:B6EJL2" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:B6EJL2" FT /protein_id="CAQ78876.1" FT /translation="MINWIQTPKNPDVAKYIDCYWFLERTDDSNSNPFPKLNPEPAGHL FT IIAASTQGYNYDIESDLKKGQGSHWLFPYSKTLQMDHTKGFSIIGIKFQVGALYLLGIE FT PKQPVVNEIVDTNISDFLCVKEGEQVLLLQQAKSDSEQLSLQLDDLFQSLFTAVKEDKH FT YVLTRKAIPLLATTPIAKLGELLHCSQRTLERSFLRVTGFTLKQCQSMNRLEAMLTYLY FT QREEYEINWTTVAHEFGFSDQPHLIRYLKSTLGVTPKEYAKNRDLTIDIYGGIESL" FT misc_feature 1298026..1298091 FT /locus_tag="VSAL_I1191" FT /note="Predicted helix-turn-helix motif with score FT 1344.000, SD 3.76 at aa 177-198, sequence FT TPIAKLGELLHCSQRTLERSFL" FT misc_feature 1298149..1298286 FT /locus_tag="VSAL_I1191" FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix protei, score 1.8e-05" FT /inference="protein motif:HMMPfam:PF00165" FT CDS complement(1298406..1299218) FT /transl_table=11 FT /locus_tag="VSAL_I1192" FT /old_locus_tag="TVS1083" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6EJL3" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6EJL3" FT /protein_id="CAQ78877.1" FT /translation="MINVIKIEELNELSTLKAEYINQATAPLDGMWLCGFVPMATHFGF FT YNNEELIGFCCVNSDGYLLQFYVNQRHYVHAADIFTSVISKIESPAGKVNGAFASTAES FT HYFSLCLDEQQEMQVNGFMYQQVKALTTPQESYLTMAVATLDQLSEFVEFAKENIGAPE FT EWVSGYYANLISRQELFGHWNGSQLIAAGERRLFNEHQTNYADLGMVVATSERGKGLGA FT QVLRYLVALANSQGLTAMCSTEKSNIASQKAITHAGFSSSHRIVQFDF" FT misc_feature complement(1298439..1298681) FT /locus_tag="VSAL_I1192" FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 2.9e-06" FT /inference="protein motif:HMMPfam:PF00583" FT CDS 1299497..1300726 FT /transl_table=11 FT /locus_tag="VSAL_I1193" FT /old_locus_tag="TVS1084" FT /product="zinc metallopeptidase" FT /EC_number="3.4.11.4" FT /db_xref="GOA:B6EJL4" FT /db_xref="InterPro:IPR001261" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR010161" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:B6EJL4" FT /protein_id="CAQ78878.1" FT /translation="MNVVERFLGYTKINTTTNQANGAAGIMPSSAGQYELACLVKKQLE FT ELGCVDIVLRDTAILTATLPSNSKKQLPTVAFFGHLDTSSERTEDTHAEVVYYEGGDIP FT LSTGPILSLKEQPELANYVGQEIIVSDGQSLLGADDKAAIAAILNALQFFYENPEVEHG FT TVKVGFVPDEEQGLLGANAFDVNEFGADFAYTLDCCGIGEFVCENWNAGNAVVTFTGQS FT AHPMNSKGNLINSLLLANSFMAQFPTKETPEHTEGREGYYWMKKLAGNSAKTVLNMDIR FT DFTEEGYVYRKAFIAEQVSMFNEENNNRAVLEMSDRYSNVHNFLKDSTLPVDLAMAAYK FT ENGIEPKVIPMRGGYDGAVLSEKGLPCPNIFTGAHNFHSIFEYLPVPSLMAASNVVKTI FT IINLTEHEGI" FT misc_feature 1299719..1299748 FT /locus_tag="VSAL_I1193" FT /note="PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family FT signature 1." FT /inference="protein motif:ProSite:PS00758" FT misc_feature 1299875..1300702 FT /locus_tag="VSAL_I1193" FT /note="HMMPfam hit to PF01546, Peptidase family FT M20/M25/M40, score 4.4e-05" FT /inference="protein motif:HMMPfam:PF01546" FT misc_feature 1299905..1300024 FT /locus_tag="VSAL_I1193" FT /note="PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family FT signature 2." FT /inference="protein motif:ProSite:PS00759" FT misc_feature 1300112..1300426 FT /locus_tag="VSAL_I1193" FT /note="HMMPfam hit to PF07687, Peptidase dimerisation FT domain, score 7.2e-07" FT /inference="protein motif:HMMPfam:PF07687" FT CDS 1300729..1302093 FT /transl_table=11 FT /gene="dcuC" FT /locus_tag="VSAL_I1194" FT /old_locus_tag="TVS1085" FT /product="anaerobic C4-dicarboxylate transporter DcuC" FT /db_xref="GOA:B6EJL5" FT /db_xref="InterPro:IPR001991" FT /db_xref="InterPro:IPR004669" FT /db_xref="InterPro:IPR018385" FT /db_xref="UniProtKB/TrEMBL:B6EJL5" FT /protein_id="CAQ78879.1" FT /translation="MAQLILVLIIVVIAARMILKGYKAEPTLLMSGTVLIFATGIFGWG FT PMLPTSVASTNFSGFDPFKYIQFLMGYRAGALGLMIMALVGFADYMSHIGANDVVVRLA FT TKPLSRIKNKNIMLFFAYCMASILQLAIPSATGLGVLLMGTLYPVMLGLGLSRGSAAAV FT IASSLAVSFTPTGVDAIRASEALGMDLMSYVSHYQAPTSIATMVVIGIMHVIWQTHVDK FT KHPEQFEEATLAESKEGSSAPSYYVMLPLLPIIMAVFFSKLVVSTINMDVTTIVFVSMF FT IAMLCECVTKRSLKVVFDGFGVFSKGMGSAFSSVVVLLVAAGVFAYGIQATGAIANLIM FT LAESVGLPSVAMTLVFAVVTLLAAVIMGSGNAPFLAFVELIPTIAASMGANTAAMLMPM FT QQASAIGRGMSPVSAVVIASATGAKLSPFDVAKRTSVPVLVGFVFHFIIVYAFYS" FT misc_feature 1300738..1302090 FT /gene="dcuC" FT /locus_tag="VSAL_I1194" FT /note="HMMPfam hit to PF03606, C4-dicarboxylate anaerobic FT carrier, score 1.6e-88" FT /inference="protein motif:HMMPfam:PF03606" FT misc_feature order(1300738..1300791,1300810..1300878,1300921..1300989, FT 1301080..1301148,1301176..1301244,1301305..1301373, FT 1301455..1301523,1301542..1301610,1301653..1301721, FT 1301758..1301826,1302028..1302087) FT /gene="dcuC" FT /locus_tag="VSAL_I1194" FT misc_feature 1300741..1301949 FT /gene="dcuC" FT /locus_tag="VSAL_I1194" FT /note="HMMPfam hit to PF03600, Citrate transporter, score FT 0.0036" FT /inference="protein motif:HMMPfam:PF03600" FT misc_feature 1301233..1302069 FT /gene="dcuC" FT /locus_tag="VSAL_I1194" FT /note="HMMPfam hit to PF03553, Na+/H+ antiporter FT family,score 0.00075" FT /inference="protein motif:HMMPfam:PF03553" FT CDS complement(1302210..1303466) FT /transl_table=11 FT /locus_tag="VSAL_I1195" FT /old_locus_tag="TVS1086" FT /product="adenylosuccinate synthetase" FT /EC_number="6.3.4.4" FT /db_xref="GOA:B6EJL6" FT /db_xref="InterPro:IPR001114" FT /db_xref="UniProtKB/TrEMBL:B6EJL6" FT /protein_id="CAQ78880.1" FT /translation="MPSIVVVGANWGDEGKGRIVDFLAADASASIRFQGGNNAGHTVVN FT DFGTFKLHQLPRGIFNPDCTAVLGPGMVISPAALSEEIAEVKAAGIEVKMHISDRATLC FT LPLHALEDTLEELRLGDGAYGSTRQGIAPAYGDRVMKKGILVGWLMQPEVLLERIQFML FT DWKMPQLKALYPTCDFSQTAEEMTEWLLEVTAPWRKFICNVTEPLKVMQKNDANLLFEA FT QLGAGRDLVYGEYPWTTSSNVTAAYAGIGSGLPALRPERIIAVAKSFSSSVGTGTLVTA FT MEEQDNFREAANEYGAVTGRPRDMGYFDAVATRNGVELQAATEIALTKIDCLSGMADLK FT ICTSYAGEHTENPIWPQTAALSPVYENMEAWQEDITGCRTFESLPKAAQAYVLRIEELM FT GVPVSMVSVGPEREQMILR" FT misc_feature complement(1302216..1303460) FT /locus_tag="VSAL_I1195" FT /note="HMMPfam hit to PF00709, Adenylosuccinate synthetase, FT score 2.4e-178" FT /inference="protein motif:HMMPfam:PF00709" FT misc_feature complement(1303044..1303112) FT /locus_tag="VSAL_I1195" FT /note="PS00107 Protein kinases ATP-binding region FT signature." FT /inference="protein motif:ProSite:PS00107" FT CDS 1303596..1304492 FT /transl_table=11 FT /locus_tag="VSAL_I1196" FT /old_locus_tag="TVS1087" FT /product="HTH-type transcriptional regulator, LysR family" FT /note="Similar to Escherichia coli HTH-type transcriptional FT regulator CynR (cyn operon transcriptiona activator) FT UniProt:P27111 (299 aa) blastp scores: E()=1e-10" FT /db_xref="GOA:B6EJL7" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EJL7" FT /inference="similar to sequence:UniProt:P27111" FT /protein_id="CAQ78881.1" FT /translation="MGMLDLHWLKTFVTLAELKHFGKTATALHMTQPNVSLHIKQLERT FT TRVKLIERNPFHLTEAGVRLLETSQNTLMELQVCQADLNAINDLSRGTLTIAASDIISR FT LLLIGPFQLFKQEFPGIDFSLLNTTSSQASELVKSAEADLGFVIAQKESQPLHFTELQQ FT IKWCALGNHLEKWQQANFDPTIVLDSEPTLILLGHDTRTRDLLDLALPSLNLLKYRIME FT VGSVDAQIDWAEAGFGVAIVPEFSIHPKRNLKTTVTLLPKFPTTSLGYIVRQNQILSKA FT IKQLLKWVDEEIIRSQK" FT misc_feature 1303611..1303784 FT /locus_tag="VSAL_I1196" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 1.8e-13" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature 1303650..1303715 FT /locus_tag="VSAL_I1196" FT /note="Predicted helix-turn-helix motif with score FT 1350.000, SD 3.78 at aa 19-40, sequence FT KHFGKTATALHMTQPNVSLHIK" FT misc_feature 1303653..1303745 FT /locus_tag="VSAL_I1196" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature 1303854..1304477 FT /locus_tag="VSAL_I1196" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2.1e-20" FT /inference="protein motif:HMMPfam:PF03466" FT CDS 1304769..1306163 FT /transl_table=11 FT /gene="gadB" FT /locus_tag="VSAL_I1197" FT /old_locus_tag="TVS1088" FT /product="glutamate decarboxylase beta" FT /EC_number="4.1.1.15" FT /db_xref="GOA:B6EJL8" FT /db_xref="InterPro:IPR002129" FT /db_xref="InterPro:IPR010107" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EJL8" FT /protein_id="CAQ78882.1" FT /translation="MPLHSKDTVRDDLLDDVYSSTDLSLSMPKYKMPEHEHDPRHAYQV FT VHDELMMDGNSRQNLATFCQTWVEDEVHKLMDECIDKNMIDKDEYPQTAELEARCVHML FT ADLWNSPDAENTLGCSTTGSSEAAMLGGMALKWAWREKMKKLGKPTDKPNMICGPVQVC FT WHKFARYWDIELREIPMEGDRLIMTPEEVIKRCDENTIGVVPTLGVTFTCQYEPVKAVH FT EALDKLQEETGLDIPMHIDAASGGFLAPFCDPELEWDFRLPRVKSINASGHKFGLSPLG FT VGWVIWRDASALHEDLIFNVNYLGGNMPTFALNFSRPGGQIVAQYYNFLRLGKEGYRKI FT HQACYDTAVYLSAEIEKMGMFDIIYDGKGGIPAMSWSLKEGVNPGFNLFDLSDRIRSRG FT WQIAAYAMPPKREDLVIMRILVRHGFSRDQADLLVADLKHCIEFFDKHPISHGSDEVES FT SGFNHG" FT misc_feature 1304865..1305905 FT /gene="gadB" FT /locus_tag="VSAL_I1197" FT /note="HMMPfam hit to PF00282, Pyridoxal-dependent FT decarboxylase conse, score 9e-115" FT /inference="protein motif:HMMPfam:PF00282" FT CDS 1306260..1308137 FT /transl_table=11 FT /locus_tag="VSAL_I1198" FT /old_locus_tag="TVS1089" FT /product="probable membrane permease" FT /db_xref="GOA:B6EJL9" FT /db_xref="InterPro:IPR006037" FT /db_xref="InterPro:IPR006512" FT /db_xref="UniProtKB/TrEMBL:B6EJL9" FT /protein_id="CAQ78883.1" FT /translation="MNIDQLSNVFHWMKSQRRTLLLTLSLFLFSSRLMAAESVEALAQH FT EASGLFGFLFTYIAHNPFVFLFLSIAIGYPLGKVTIKGINLGSTAGTLVVGVGIALTAF FT SVYGLHIDAPGLVSDIFLMMFMYAIGMKVGPQFFSGLARGGIDFVVIGLIVVFSNFLIV FT FFGSKLLDLAPGYAAGIISGSYTVTAVMGVAQSAINLGAVKAPAGMTLDQISANIAAGY FT AISYILSSVFIILLIKYLPAMFGIDPVKAGKDAEADFGAGGDTEALPSTNGFSNLGVLP FT LDIRAYRVDHQELVGQNVEALFHRYPHAAILKVVRGDEVFDAVDNPQLQLGDVIGIRGD FT YHVLIEGGESTVGVEVDEPRARNVDIEVADIHLGKSAYTSKTIEEMSKEVGFGIYMKAV FT FRQGHQLPMLPQTVVEVGDVIRVAGSDWCVKQAAKKLNSNPIVESTLTETFYLALSLLI FT GYVCGHLSVTFSGIPFALGTSAGCMLTGIIFSFLRTRNPAFGGPMSEGARSFLQDIGLS FT LFVAVLAAAVGPKILASFQGIVVIKIAGLGLLAALLPPLLAWIYGLYFRKMNPAILAGA FT CAGARNSTPAMKGAQDECQSDMPAVGYPVPYALTSMIVLVLGYLTMVLY" FT sig_peptide 1306260..1306364 FT /locus_tag="VSAL_I1198" FT misc_feature order(1306317..1306376,1306419..1306487,1306506..1306574, FT 1306617..1306685,1306704..1306757,1306800..1306868, FT 1306902..1306970,1307670..1307738,1307799..1307858, FT 1307886..1307954,1308060..1308128) FT /locus_tag="VSAL_I1198" FT misc_feature 1306452..1306985 FT /locus_tag="VSAL_I1198" FT /note="HMMPfam hit to PF06826, Predicted Permease Membrane FT Region, score 1.7e-33" FT /inference="protein motif:HMMPfam:PF06826" FT misc_feature 1307364..1307387 FT /locus_tag="VSAL_I1198" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1307610..1308128 FT /locus_tag="VSAL_I1198" FT /note="HMMPfam hit to PF06826, Predicted Permease Membrane FT Region, score 4.2e-26" FT /inference="protein motif:HMMPfam:PF06826" FT CDS complement(1308200..1309102) FT /transl_table=11 FT /locus_tag="VSAL_I1199" FT /old_locus_tag="TVS1090" FT /product="HTH-type transcriptional regulator, LysR-family" FT /db_xref="GOA:B6EJM0" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EJM0" FT /protein_id="CAQ78884.1" FT /translation="MGQLESMHIFTKVVEAGGITKAAEQLNLAKSAVSKRLSELEQQLG FT IKLINRTTRTSSLTEAGQSYFIKCKLILEEVNDLNCHVSAIHQELNGTIKLAVPLTFGV FT MHLVPALDDFAKAHPKLKLDIDFSDRKVDLVEEGIDLAIRIGNLTSSTLQAKAIAPIHH FT VLCASPAYLAEHGNPSTPDALKSHQLLRYRQQPLSGVELRDNKNQAMTVPMETHCIANN FT GDFLKAMAVSGHGIIFMPTFIVWEELAKGTLLPIMNDYHFNSVHAYALYPETRYLPQKV FT RKLIDFLSAYFGNEPYWDK" FT misc_feature complement(1308224..1308844) FT /locus_tag="VSAL_I1199" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2.3e-44" FT /inference="protein motif:HMMPfam:PF03466" FT misc_feature complement(1308914..1309093) FT /locus_tag="VSAL_I1199" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 1.2e-20" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature complement(1308959..1309051) FT /locus_tag="VSAL_I1199" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature complement(1308989..1309054) FT /locus_tag="VSAL_I1199" FT /note="Predicted helix-turn-helix motif with score FT 1641.000, SD 4.78 at aa 17-38, sequence FT GGITKAAEQLNLAKSAVSKRLS" FT CDS 1309250..1310101 FT /transl_table=11 FT /locus_tag="VSAL_I1200" FT /old_locus_tag="TVS1091" FT /product="putative pirin" FT /db_xref="InterPro:IPR003829" FT /db_xref="InterPro:IPR008778" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR012093" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:B6EJM1" FT /protein_id="CAQ78885.1" FT /translation="MTNKNRALKNVFPGIATSDGDGVKLTRIIGTQQLNVLDPFLLLDC FT FESDDASDYIGGFPTHPHRGFETVTYLLNGKMRHKDNAGHEGVVEPGGVQWMSAGKGVL FT HSEMPEQEEGLLKGFQLWVNLPKASKMMAPAYQEYPPESTPVELRENGTEVRVISGTTN FT EGTTGPVKNTHITPTYMDVKLPEGMTFEQALPIGHNAFIYVIEGAVTMANDSTQKITKK FT SLGVFDEGEQVSVMASDSETRFLLIAGRPLNEPIARGGPFVMNTREEVLQAFDDYSQGR FT FN" FT misc_feature 1309313..1309618 FT /locus_tag="VSAL_I1200" FT /note="HMMPfam hit to PF02678, Pirin, score 1.3e-55" FT /inference="protein motif:HMMPfam:PF02678" FT misc_feature 1309784..1310098 FT /locus_tag="VSAL_I1200" FT /note="HMMPfam hit to PF05726, Pirin C-terminal cupin FT domain, score 7.4e-38" FT /inference="protein motif:HMMPfam:PF05726" FT CDS 1310164..1311135 FT /transl_table=11 FT /locus_tag="VSAL_I1201" FT /old_locus_tag="TVS1092" FT /product="putative IMP dehydrogenase/GMP reductase" FT /db_xref="InterPro:IPR004046" FT /db_xref="InterPro:IPR010987" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR016639" FT /db_xref="InterPro:IPR017933" FT /db_xref="UniProtKB/TrEMBL:B6EJM2" FT /protein_id="CAQ78886.1" FT /translation="MGLLVDGKWHTDWYDTASTGGKFERKASSFRHWITKDGRAGPSGV FT SGFNAESGRYHLYVSLACPWAHRTVIYRKLKGLEDMISMSVVNAFMGDDGWTFEPGEGV FT IEDTVNHATYAHEIYTKAAPDYTGRVTVPILWDKKTNTIVSNESAEIIRMFNSAFDDIG FT ATELDFSPEHLLNDIDELNAFIYPTINNGVYRAGFATTQAAYDDAVAEVFGALETVEQR FT LSTQRYLIGDEITEADWRLFTTLIRFDAVYVGHFKCNLKRIVDYPNIWGYLRDLFQQPG FT VSETVNIDYIKAHYYGSHETINPTLIIPKGPALDFFSQHHRD" FT misc_feature 1310704..1311003 FT /locus_tag="VSAL_I1201" FT /note="HMMPfam hit to PF00043, Glutathione FT S-transferase,C-terminal domain, score 0.00014" FT /inference="protein motif:HMMPfam:PF00043" FT CDS 1311319..1311840 FT /transl_table=11 FT /gene="hcp" FT /locus_tag="VSAL_I1202" FT /old_locus_tag="TVS1093" FT /product="secreted protein Hcp-1 (haemolysin co-regulated FT protein)" FT /note="Expression may be stress-induced" FT /db_xref="InterPro:IPR008514" FT /db_xref="InterPro:IPR017728" FT /db_xref="UniProtKB/TrEMBL:B6EJM3" FT /protein_id="CAQ78887.1" FT /translation="MPTPAYMSIKGEVQGDITKDAYSADSIGNTWQEAHIDEFLVQELD FT HVLTVPRDPQSGQPTGQRVHRPVIVTKQQDRCSPLLFNSLVSGEKLPECSINFYRTSIS FT GKQEHYYTIKLIDALLVDMQTRMAHCQDAATSDRVTEEVLKFTYRAIEVTHETCGTAGN FT DDWRAPREAG" FT misc_feature 1311328..1311786 FT /gene="hcp" FT /locus_tag="VSAL_I1202" FT /note="HMMPfam hit to PF05638, Protein of unknown function FT (DUF796), score 7.1e-73" FT /inference="protein motif:HMMPfam:PF05638" FT CDS complement(1311948..1312160) FT /transl_table=11 FT /locus_tag="VSAL_I1203" FT /old_locus_tag="TVS1094" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EJM4" FT /protein_id="CAQ78888.1" FT /translation="MMKDYELFIKINDAILLEFDIFKAWEKSLLLNAQNQLMDRFPISE FT PQRELLTKVLNKKRPKKKREKKPYC" FT CDS 1312374..1314290 FT /transl_table=11 FT /locus_tag="VSAL_I1204" FT /old_locus_tag="TVS1095" FT /product="putative phospholipase" FT /note="C-terminal part is similar to Vibrio cholerae FT Lysophospholipase L2 LypA UniProt:Q56636 (338 aa) fasta FT scores: E()=1.5e-40, 38.554% id in 332 aa, and N-terminal FT part is similar to Escherichia coli Hypothetical protein FT UniProt:Q2M5U0 (357 aa) fasta scores: E()=4.4e-40, 38.170% FT id in 317 aa. From sequence comparisons the CDS appears as FT a fusion of two genes. The sequence has been checked and is FT believed to be correct" FT /db_xref="GOA:B6EJM5" FT /db_xref="InterPro:IPR002641" FT /db_xref="InterPro:IPR016035" FT /db_xref="UniProtKB/TrEMBL:B6EJM5" FT /inference="similar to sequence:UniProt:Q56636" FT /protein_id="CAQ78889.1" FT /translation="MGEHYSISKQNYDVFRVPKTKVDKIALVTEGGGQRGIFTAGVLDT FT FLEAKFNPFALLIGTSAGSLNLASYICGHKGHAYRIINQITRSPDFFKLSRFLLSGEGM FT DLDWLIDKTEADIPLNWTVGEMHLHTKQVLAVAAHATNFETKYFDLSTTNWKDILRASC FT AIPALHKQPVIMDKMEWVDGGLTTPIPVQEAYDRGYRHIVVIRTVPVEFKENHDWMMKV FT AKMTKNAKLNQMAVMLMNHEESYRKTQVFLANPPDDVTIYEISPNKNLESKLLGSTKEQ FT LDNDYQHGKDVGKLFLEVIAPKLNLEQAPQPHILVKTHEDRLKEENRKQDYEDPIDKIW FT SNKTHGEVLGVDRIALKWININVGEKKQTLVIVNGRNESYWKYKEAILELSQYFNIYTY FT DHRGQGESGRITQDHELGHVDDFHDYVMDLYIFMEKVVRPNLEGECFMLSHSMGGAVTA FT QYLSKFDHPVTASAATSPMFGVYIPGKAYGLKTQTLNLLDVLASKPNYALGQSHFKKVE FT YDDNVLTHSKIRYQMFVELFENMPNLRLGGPSTHWITESIKAGKKCIAEAHKIKIPMLI FT LQAGDDLVVSNVAQRSFHENSHLCHLETIPDSYHDMLIEDDKHRDIVLRKLINFFSSDY FT KFY" FT misc_feature 1312452..1312958 FT /locus_tag="VSAL_I1204" FT /note="HMMPfam hit to PF01734, Patatin-like FT phospholipase,score 8.6e-14" FT /inference="protein motif:HMMPfam:PF01734" FT misc_feature 1313553..1314251 FT /locus_tag="VSAL_I1204" FT /note="HMMPfam hit to PF00561, alpha/beta hydrolase FT fold,score 2.5e-13" FT /inference="protein motif:HMMPfam:PF00561" FT repeat_region complement(1314379..1316692) FT /note="VSa2" FT repeat_region complement(1314379..1314402) FT /note="IR of VSa2" FT CDS complement(1314395..1315882) FT /transl_table=11 FT /locus_tag="VSAL_I1205" FT /old_locus_tag="TVS1096" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EHG8" FT /protein_id="CAQ78890.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT CDS complement(1315953..1316300) FT /transl_table=11 FT /locus_tag="VSAL_I1206" FT /old_locus_tag="TVSb0013" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78891.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS complement(1316297..1316611) FT /transl_table=11 FT /locus_tag="VSAL_I1207" FT /old_locus_tag="TVS1098" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78892.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT repeat_region complement(1316669..1316692) FT /note="IR of VSa2" FT CDS complement(1316693..1317643) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1208" FT /old_locus_tag="TVS1099" FT /product="putative exported protein (fragment)" FT /note="Similar to Vibrio fischeri Hypothetical protein FT UniProt:Q5E5X8 (317 aa) fasta scores: E()=2.1e-87, 68.770% FT id in 317 aa. The insertion of the downstream IS element FT truncates the original stop codon of the CDS. There is an FT inframe translational stop codon 10 amino acid residues FT further downstream within the IS element. The extended CDS FT may therefore be expressed and functional" FT /inference="similar to sequence:UniProt:Q5E5X8" FT sig_peptide complement(1317587..1317643) FT /locus_tag="VSAL_I1208" FT repeat_region complement(1317680..1318684) FT /note="VSa6" FT repeat_region complement(1317680..1317698) FT /note="IR of VSa6" FT CDS complement(1317707..1318588) FT /transl_table=11 FT /locus_tag="VSAL_I1209" FT /old_locus_tag="TVS1100" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EJM9" FT /protein_id="CAQ78894.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSHTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature complement(1317767..1318261) FT /locus_tag="VSAL_I1209" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(1318666..1318684) FT /note="IR of VSa6" FT CDS 1318900..1319895 FT /transl_table=11 FT /locus_tag="VSAL_I1210" FT /old_locus_tag="TVS1101" FT /product="putative NADP or NAD utilising oxidoreductase" FT /note="Expression may be stress-induced" FT /db_xref="GOA:B6EJN0" FT /db_xref="InterPro:IPR000683" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EJN0" FT /protein_id="CAQ78895.1" FT /translation="MTEKKIKWGIAGLGNIAHRFAQDLTSNSQCGELQAVAARDVDKAE FT RFATRYKAVSHYGDYEQLATDPTVDIVYVATIHPYHRPLVELFLSHHKHVLVEKPAFTN FT YQDWQDMQKLAKDSGVLLLEAMKTVVFPAYRELKTFMNEHKIVVDSIEASFGNESVYDP FT NIFVFNPELSGGATLDVGVYGVWFYCDLCHFFGEDVPTPSVSITAEHPEWRVDENVEFL FT FDGKMKGKIGASISKNLPRSAILKGDGVEIVIHDKWWNPSRIDVHLRGQTHTITHSCGG FT GFEHEIDYCSELLLNNAQTSSVLNTEISGQVLSILEQALITNGYTHLTKR" FT misc_feature 1318915..1319277 FT /locus_tag="VSAL_I1210" FT /note="HMMPfam hit to PF01408, Oxidoreductase FT family,NAD-binding Ross, score 2.4e-30" FT /inference="protein motif:HMMPfam:PF01408" FT misc_feature 1318933..1319271 FT /locus_tag="VSAL_I1210" FT /note="HMMPfam hit to PF03447, Homoserine dehydrogenase,NAD FT binding d, score 0.0034" FT /inference="protein motif:HMMPfam:PF03447" FT CDS 1319907..1321394 FT /transl_table=11 FT /locus_tag="VSAL_I1211" FT /old_locus_tag="TVS1102" FT /product="putative extracellular solute-binding protein" FT /db_xref="GOA:B6EJN1" FT /db_xref="InterPro:IPR000914" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EJN1" FT /protein_id="CAQ78896.1" FT /translation="MENIKRKLEVYEILFRKYGPVASSCNITELSLLLKVSERHVQTVI FT KRLVNTGWIEWKATPGRSKKAQLTCYKEPIEACYDCVSTVVDSGNTDSVLNILSFGGRN FT ASIELKKYLLHSNNIVPRSVCMPFHRKIGSLLPHNAICRTERYLVSQIFQRLVSIDNDI FT IHPDFAHHWEHDSSATQWRFYLRSGVVCHDGNPLTAKDVVRCLKTLIANYYWSPLYSNL FT KGIRFLSEECIEITLSEGDFHLPRLLARSEASIYPIHVSTDKIVGSGPFQVEVWSPRMI FT RLGRFEHYALVFPLLERVDLWVYEEWAKDKVCAQNQLSLSFPEKKVTYKSKYHSLFMII FT KKQGSNLDCSNIVTYENNNECKALAQKLYSSQTLQDVFYGDYHHQADTALCSILEESDR FT LYSRLAFLSLYPFKNKIVKDVDYDLFLNKVSDIRNTPDLALAVEELEQLYDWLQQIGVI FT DIVKKDSFELITSENLKEVRMNGFGWCDLAKLWIANH" FT misc_feature 1319979..1320044 FT /locus_tag="VSAL_I1211" FT /note="Predicted helix-turn-helix motif with score FT 1296.000, SD 3.60 at aa 25-46, sequence FT CNITELSLLLKVSERHVQTVIK" FT misc_feature 1320393..1321391 FT /locus_tag="VSAL_I1211" FT /note="HMMPfam hit to PF00496, Bacterial extracellular FT solute-binding prot, score 5.6e-07" FT /inference="protein motif:HMMPfam:PF00496" FT CDS complement(1321384..1322226) FT /transl_table=11 FT /locus_tag="VSAL_I1212" FT /old_locus_tag="TVS1103" FT /product="transcriptional regulator, AraC-family" FT /db_xref="GOA:B6EJN2" FT /db_xref="InterPro:IPR003313" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:B6EJN2" FT /protein_id="CAQ78897.1" FT /translation="MDVILANSKTHFLRSSVLPFELRYSGNSNACYKKHSHREFSIGVV FT DSGVSEYINQNSKQEISIGSTVIINPETVHSCNPKSGTNWSYKMLFVELDWLIQLQTSI FT TGKKHSEFHPFQQNHSRCPTLYQNFQSLTQVLIENESSLFVEESAITFFSTLFINDLKA FT MPSHKTIPKQATHLAYQYISDNVDKNMSISEIAKESGLSDFYLIHSFKKQYGITPHAYQ FT MMMKINKAKDLLKKGNDIASIATDLGFTDQSHFHRHFKSIVAATPKQYKIDKHSTFND" FT misc_feature complement(1321411..1321542) FT /locus_tag="VSAL_I1212" FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix pr, score 3.3e-07" FT /inference="protein motif:HMMPfam:PF00165" FT misc_feature complement(1321426..1321551) FT /locus_tag="VSAL_I1212" FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT /inference="protein motif:ProSite:PS00041" FT misc_feature complement(1321558..1321698) FT /locus_tag="VSAL_I1212" FT /note="HMMPfam hit to PF00165, Bacterial regulatory FT helix-turn-helix pr, score 3.3e-12" FT /inference="protein motif:HMMPfam:PF00165" FT misc_feature complement(1321594..1321659) FT /locus_tag="VSAL_I1212" FT /note="Predicted helix-turn-helix motif with score FT 1268.000, SD 3.51 at aa 190-211, sequence FT MSISEIAKESGLSDFYLIHSFK" FT misc_feature complement(1321750..1322178) FT /locus_tag="VSAL_I1212" FT /note="HMMPfam hit to PF02311, AraC-like ligand binding FT domain, score 8.8e-10" FT /inference="protein motif:HMMPfam:PF02311" FT CDS complement(1322229..1322831) FT /transl_table=11 FT /locus_tag="VSAL_I1213" FT /old_locus_tag="TVS1104" FT /product="transporter, LysE family" FT /db_xref="GOA:B6EJN3" FT /db_xref="InterPro:IPR001123" FT /db_xref="UniProtKB/TrEMBL:B6EJN3" FT /protein_id="CAQ78898.1" FT /translation="MTLFLAMAMFALITSLSPGPVNILATITGANHGYVKTIPHIFGAT FT VGFVSILILLGLGLIQVLDNSHTATSILNYFGSTFLLYLAYKVATSDRADQDRDNKGNA FT PTMVQGLLCQWLNPKAWIVSLSGVTVFSSNGVIPLEDLGAFSMIFFIVCYCCISTWALL FT GLTIGRYLEHPVHYKIFNRLMGSLLALTVVYVFFISN" FT misc_feature complement(1322235..1322798) FT /locus_tag="VSAL_I1213" FT /note="HMMPfam hit to PF01810, LysE type translocator,score FT 2.3e-09" FT /inference="protein motif:HMMPfam:PF01810" FT misc_feature complement(order(1322238..1322297,1322340..1322408, FT 1322574..1322633,1322646..1322714,1322751..1322819)) FT /locus_tag="VSAL_I1213" FT sig_peptide complement(1322757..1322831) FT /locus_tag="VSAL_I1213" FT CDS 1323029..1323775 FT /transl_table=11 FT /locus_tag="VSAL_I1214" FT /old_locus_tag="TVS1105" FT /product="putative mobile metallo-beta-lactamase" FT /note="Similar to Pseudomonas aeruginosa mobile FT metallo-beta-lactamase blaGIM-1 UniProt:Q704V1 (250 aa) FT fasta scores: E()=1.1e-33, 40.833% id in 240 aa" FT /db_xref="GOA:B6EJN4" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:B6EJN4" FT /inference="similar to sequence:UniProt:Q704V1" FT /protein_id="CAQ78899.1" FT /translation="MKFMFKLTLALLSSVIGFNAAAEPVVKPLQFEEITNNVFLVKSYR FT EFKNLQSPKKPILVDANSLVYVDGKDAYLIDTPWNASNMPQLMTWIENRGLTLKKTVFS FT HFHEDQTGGLEYLQEHHFETYASALTNKFLKGDNKKATNHQFSGDNFVLLENKIEVFYP FT GGGHTKDNAVVWLPKEKVLLGGCLMRANEVNTIGWTGDADMKAWAGSAQKVLTKYPQAN FT FVVPGHGNVGEGTSIISHTVDITGKI" FT sig_peptide 1323029..1323094 FT /locus_tag="VSAL_I1214" FT misc_feature 1323206..1323712 FT /locus_tag="VSAL_I1214" FT /note="HMMPfam hit to PF00753, Metallo-beta-lactamase FT superfamily, score 3.8e-16" FT /inference="protein motif:HMMPfam:PF00753" FT CDS 1323927..1324475 FT /transl_table=11 FT /locus_tag="VSAL_I1215" FT /old_locus_tag="TVS1106" FT /product="membrane protein" FT /db_xref="InterPro:IPR021354" FT /db_xref="UniProtKB/TrEMBL:B6EJN5" FT /protein_id="CAQ78900.1" FT /translation="MSNIQKQSRRARILFQGFLVFTPIAVLYYWLTIETQYDFLTSFGI FT IQTTIDVNGYTQLPLTLTIRMLAVISSLLLCSIVMYALNVLIHLFRNYERNDIFSLENA FT MSYQKLGYSLFYWVGASVIYGAAMSVILSFNNPPGERILAVSFVGMNFLTLLFGFITLI FT ISWVMKEGYILADENEHTI" FT misc_feature order(1323957..1324025,1324128..1324196,1324254..1324322, FT 1324350..1324418) FT /locus_tag="VSAL_I1215" FT CDS 1324485..1324712 FT /transl_table=11 FT /locus_tag="VSAL_I1216" FT /old_locus_tag="TVS1107" FT /product="putative HTH-type transcriptional regulator" FT /db_xref="GOA:B6EJN6" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:B6EJN6" FT /protein_id="CAQ78901.1" FT /translation="MTIRINLDVMMAKRKMRLKHLAQEVGITEANLSILKNGKAKAVRL FT ATLDKLCEILECQPGDILEYVVDLDSKTTD" FT misc_feature 1324530..1324595 FT /locus_tag="VSAL_I1216" FT /note="Predicted helix-turn-helix motif with score FT 1689.000, SD 4.94 at aa 16-37, sequence FT MRLKHLAQEVGITEANLSILKN" FT CDS complement(1324786..1325310) FT /transl_table=11 FT /locus_tag="VSAL_I1217" FT /old_locus_tag="TVS1108" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR018531" FT /db_xref="UniProtKB/TrEMBL:B6EJN7" FT /protein_id="CAQ78902.1" FT /translation="MTMLSDITLTPFSNSLNVAIHLMTKAKAHFEAQNRNTNDIVDLQL FT VDDMLPLSFQVNSICKHTLGATKAVLSGNFYIPSPLGEIDFNGLIELLQNTQKELSAIT FT ENEVNSRSGETVIFHYPERPMPFTAENFITSFSTPNLYFHQTTLYNLLRKEGVPLSKLD FT FIGALSLSPSE" FT misc_feature complement(1325032..1325094) FT /locus_tag="VSAL_I1217" FT /note="PS00079 Multicopper oxidases signature 1." FT /inference="protein motif:ProSite:PS00079" FT repeat_region 1325363..1326367 FT /note="VSa6" FT repeat_region 1325363..1325381 FT /note="IR of VSa6" FT CDS 1325459..1326340 FT /transl_table=11 FT /locus_tag="VSAL_I1218" FT /old_locus_tag="TVS1109" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ78903.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 1325786..1326280 FT /locus_tag="VSAL_I1218" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 1326349..1326367 FT /note="IR of VSa6" FT CDS 1326459..1326638 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1219" FT /old_locus_tag="TVS1110" FT /product="hypothetical protein (fragment)" FT /note="Similar to Vibrio vulnificus Threonine aldolase FT UniProt:Q7MEZ7 (358 aa) fasta scores: E()=2.7e-05, 44.898% FT id in 49 aa. CDS may be truncated by the insertion of the FT upstream IS element and subsequent recombination events" FT /db_xref="PSEUDO:CAQ78904.1" FT /inference="similar to sequence:UniProt:Q7MEZ7" FT CDS 1326995..1328293 FT /transl_table=11 FT /gene="braB" FT /locus_tag="VSAL_I1220" FT /old_locus_tag="TVS1111" FT /product="branched chain amino acid transport system II FT carrier protein" FT /db_xref="GOA:B6EJP0" FT /db_xref="InterPro:IPR004685" FT /db_xref="UniProtKB/TrEMBL:B6EJP0" FT /protein_id="CAQ78905.1" FT /translation="MKKHNLLAIGLMTFAMFLGAGNIIFPPFLGLEAGTQFLPAMLGFL FT LTAVGLPALTLIVLGRLSNSGQLTQALPKPLAIAFWVLLFIAIGPAFGMPRAVTVAYEM FT GIKPFFTGDHLMLFSVMFVGATLLLAFQRGKLVDYIGKVMTPLLVLMLAALALAAIITP FT LGVLGEPSASYQHKAITSGLIQGYMTMDAIAAVGFGWVIIKAIRDKGCESPKDVFQATL FT KVTLIYALLMSACYLAMAYVGATSTSIAEGATNGGELLTRYVAEIFGPLGQYLLAGIII FT MACLTTTVGLTNACAEYSQQTFRTPFAITAIIVTAMTGVVANFGLEQILAISLPAILIL FT CPVAIALVLAAWFLPTTKHNTISYVSVVMISVVFGGLDALHILGLLSDSLSASLTHYIP FT LFSAHASWFLPVVITVFISLLLNRKSSALESSN" FT sig_peptide 1326995..1327054 FT /gene="braB" FT /locus_tag="VSAL_I1220" FT misc_feature 1326998..1328269 FT /gene="braB" FT /locus_tag="VSAL_I1220" FT /note="HMMPfam hit to PF05525, Branched-chain amino acid FT transport p, score 8.3e-137" FT /inference="protein motif:HMMPfam:PF05525" FT misc_feature order(1327007..1327075,1327103..1327171,1327208..1327276, FT 1327319..1327387,1327424..1327492,1327535..1327603, FT 1327664..1327732,1327814..1327882,1327901..1327969, FT 1327979..1328047,1328081..1328149,1328192..1328260) FT /gene="braB" FT /locus_tag="VSAL_I1220" FT CDS 1328569..1329081 FT /transl_table=11 FT /locus_tag="VSAL_I1221" FT /old_locus_tag="TVS1112" FT /product="membrane protein" FT /note="CDS is extended at the N-terminus in comparison to FT orthologues" FT /db_xref="InterPro:IPR021125" FT /db_xref="UniProtKB/TrEMBL:B6EJP1" FT /protein_id="CAQ78906.1" FT /translation="MTFSIRESVELKEVNVTTIKKGLRAVAILEASKGIMSLLVAFGVH FT ALADHNLRHLAELIVSRLHLNPASHLPSVFIDAASGLTDAKIMLFTIGAVVYSIIRLVE FT AYGLWRAQVWTEWFALVSGAIYIPFELYEIIFRTSILSFGAFIINIIVVGYMAYVILDK FT KKVTPIS" FT misc_feature order(1328644..1328712,1328800..1328868,1328905..1328973, FT 1328983..1329051) FT /locus_tag="VSAL_I1221" FT CDS complement(1329187..1331943) FT /transl_table=11 FT /locus_tag="VSAL_I1222" FT /old_locus_tag="TVS1113" FT /product="outer membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EJP2" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ78907.1" FT /translation="MKIFLTGLTLLIAVPTLAHSAPLVTPNQAGVAQDQDYYTQDVRNT FT RLIFTEENKQHAEHAASIESILQPAYEDTFGYQMDDRLNVGLMSSYNQIANGFSTQYPL FT NRQINYMGGAQLPDYFSSSSWLDTLLFHETAHDYQMNAKDNVVSKSMFAVLHNGSIGPI FT GLIPAVLPNSTASSFMLEGNAVLNESWHGQGGRLYSGRYRAMTHVHAKAGNLSPERLYN FT DSLFFPYGESTYVFGSQYQYYLAETYGLDVTNKFFKNRSQHWLWPFQVNKPMKQTVGED FT FDTTFAAWVKQEAQEAKEMQLAQGEIVARSKYYGELNTQQGNILFLTNPTAVRAPTLVH FT YDLTNNEVTKESSSLDMGKVYYNQDKYYTVSGRRTSVWRTTQGLFNNDAQIKEGSEGRV FT HQGYMSNGKDVYFKTTESFVQPQLYVGDKFYSAVNSSVLVKNDNLYYFVQKGNDRTLYR FT NKEALLTLPAFYTIVKDVDSSGRVYFIANTETGSSLYRTKDGKVERVLSADNVIDARLI FT NDDKVLATAISADDYYYVVEDMEITEEAPYQVKLFWDDKGGLADQQQQKLANLEDKQLN FT TDTSYGLFNNIHYSRGALTVGAATEKDDNGESKQKLRYNATFEFTDPLERSTYSLWAMN FT DDEYSDLIGAGFSNNQFFIMGGVRAYYVLNDNYSDNNIQKDQTRSSGVAAQLRLPFLQT FT GFWNAEISSNFYQDYKLDEREPLSAQLDISRTEHYGNSWLLNKEAAVSLYGVQDRHDAI FT HGASLSFGTDLPSEFYINLSGKYSGSDTNKAGIYERRGVELTQGSDFINNDPSSFIMPS FT LKDDAFAETASLAELTLSKVINLSAYSFKGPISLRREMIEFSYRRYDLGNVNTLGDVAI FT NQGVVGLHFDTLIMNVLPIGFYTQYIHNDENPITDKNSFQAGLSVPL" FT sig_peptide complement(1331884..1331943) FT /locus_tag="VSAL_I1222" FT CDS complement(1332155..1332745) FT /transl_table=11 FT /locus_tag="VSAL_I1223" FT /old_locus_tag="TVS1114" FT /product="outer membrane protein A precursor" FT /db_xref="GOA:B6EJP3" FT /db_xref="InterPro:IPR000498" FT /db_xref="InterPro:IPR011250" FT /db_xref="InterPro:IPR017690" FT /db_xref="UniProtKB/TrEMBL:B6EJP3" FT /protein_id="CAQ78908.1" FT /translation="MKKPILLLALLSACSYANAAANDVSGVYLGGGFGTTDFDDDGGFG FT SANINDNDSTFKLIGGYQFNRIVAVEMQYTKYGDLKLTHYNSPINGTVEHSSVSLAANV FT GYTFGSGWRPFAIAGLGSIEQSGKAYGLSDSDSGTSFHYGAGVEYTPKTLGGLAFRVAY FT EGDLFVVDSGSNNIDDDYAMTIGTLYAGATYKF" FT misc_feature complement(1332158..1332730) FT /locus_tag="VSAL_I1223" FT /note="HMMPfam hit to PF01389, OmpA-like transmembrane FT domain, score 1.4e-07" FT /inference="protein motif:HMMPfam:PF01389" FT sig_peptide complement(1332689..1332745) FT /locus_tag="VSAL_I1223" FT misc_feature complement(1332704..1332736) FT /locus_tag="VSAL_I1223" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1333119..1334027 FT /transl_table=11 FT /locus_tag="VSAL_I1224" FT /old_locus_tag="TVS1115" FT /product="hypothetical protein" FT /db_xref="GOA:B6EJP4" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:B6EJP4" FT /protein_id="CAQ78909.1" FT /translation="MQKITIVNLVLEPATRRLSNNADDAIILRPLPYNVFTLLLEQKGN FT CIDRDELFDVCWEGAIVTDQALTNVISGLRRNLIQLEAEGIAIKTVSKVGYLLTVDETV FT VMQPVIEPKIIPPVIDNIEPKAVLVSPQAEDPLRVHDNVAISNDVQVLPTTEVGRSRVR FT LLTKPSLKSALIAFCLCSLIAAVCWYEKASSVPYFLVKENYNHFEIKNTDFYILNNTRG FT KDNIEAIQSGLESLNLVECNAEIYIRMYDSVYDDDTYSLKGYIVAKNSNRNSNYSLSKF FT SHENLPTIIANGLKRAKLICE" FT misc_feature 1333185..1333412 FT /locus_tag="VSAL_I1224" FT /note="HMMPfam hit to PF00486, Transcriptional regulatory FT protein, C ter, score 2.8e-05" FT /inference="protein motif:HMMPfam:PF00486" FT CDS 1334018..1334500 FT /transl_table=11 FT /locus_tag="VSAL_I1225" FT /old_locus_tag="TVS1116" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EJP5" FT /protein_id="CAQ78910.1" FT /translation="MRIVNLVLFLILIGAGIYKWMPENTEFSGTRWSCNELSTGFTSAP FT YEKYQEILERDLFDFASSSNLTLYQSGELVFKNGEREKYELLYELGYKTVAKNKISLVY FT KKIDWHRQPKNAPIFIRDIESLKGFEFDLKYMIDDDQLYFQNRIKNEDKNFVGFAS" FT CDS complement(1334541..1334876) FT /transl_table=11 FT /locus_tag="VSAL_I1226" FT /old_locus_tag="TVS1117" FT /product="hypothetical protein" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EJP6" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6EJP6" FT /protein_id="CAQ78911.1" FT /translation="MFIHTLFNIRNRNFLILLSENTMQQTSIKFSAFGLTHQLKRTILW FT LKSFGNGIGQQLMTHAKQQRNALSLSVYKQNEASYQFYLKQGFSVKSEQADEHTGCMEY FT SMTFDVK" FT CDS 1335288..1336601 FT /transl_table=11 FT /gene="dcuB" FT /locus_tag="VSAL_I1227" FT /old_locus_tag="TVS1118" FT /product="anaerobic C4-dicarboxylate transporter" FT /db_xref="GOA:B6EJP7" FT /db_xref="InterPro:IPR004668" FT /db_xref="UniProtKB/TrEMBL:B6EJP7" FT /protein_id="CAQ78912.1" FT /translation="MFLIEFLIVLVCILIGARIGGIGLGVMGGIGLAILSFVFGLQPTS FT PPIDVMLMIMAVVAAAAAMQAAGGLEYLIKIASRILRKNPRHITFIAPLVTYMFTFLAG FT TGHVAYSVLPVISEVSRRSGIRPERPLGMAVIASQFAIVASPIAAAVVALVAFLEPQGI FT TLADVLMITIPGTFCGLALACVIVNKLGKDLKDDPEYQRRMQDPVFRKEMEAEVKVEEI FT EIKPGAKKAVGLFLFGAIVVVIMGAFPSLRPNFNGSPMGMAHTIEIVMLAMAALIILLC FT KPDGNEITQGSVFHAGMRAIVAIFGIAWLGDTFIAGHDIMVKEAVSGLVEVAPWTFAFA FT LFGLSVMVNSQGATTAVLVPVAITLGLPPEVIIATFVAVNGYFFIPNYGPIIASIDFDR FT TGTTKIGKYIFNHSFMIPGLLSMVFSIIFGFVFASMVL" FT sig_peptide 1335288..1335470 FT /gene="dcuB" FT /locus_tag="VSAL_I1227" FT misc_feature 1335291..1336493 FT /gene="dcuB" FT /locus_tag="VSAL_I1227" FT /note="HMMPfam hit to PF03600, Citrate transporter, score FT 0.0028" FT /inference="protein motif:HMMPfam:PF03600" FT misc_feature 1335300..1336394 FT /gene="dcuB" FT /locus_tag="VSAL_I1227" FT /note="HMMPfam hit to PF03605, Anaerobic c4-dicarboxylate FT membrane transpo, score 4.8e-217" FT /inference="protein motif:HMMPfam:PF03605" FT misc_feature order(1335306..1335410,1335438..1335506,1335567..1335635, FT 1335693..1335761,1335780..1335848,1335981..1336040, FT 1336059..1336127,1336170..1336238,1336263..1336331, FT 1336398..1336466,1336527..1336595) FT /gene="dcuB" FT /locus_tag="VSAL_I1227" FT CDS 1336870..1338675 FT /transl_table=11 FT /locus_tag="VSAL_I1228" FT /old_locus_tag="TVS1119" FT /product="putative exported protein" FT /db_xref="InterPro:IPR015943" FT /db_xref="UniProtKB/TrEMBL:B6EJP8" FT /protein_id="CAQ78913.1" FT /translation="MNRNTLTLTTLAVVTSALLGCSQQSNIPTSENTFSAIDTFGIQCK FT SQEEPKRGSSGIRGLTFVGSSIADAPFVTSAAEIVSYDSCTDKLYVVNAQAKKIDVLTL FT DANSQPKAAGYIDLQSAAKRSGIEIGAANSVSAHHGLVAVAVENKDKQKNGIIALFRSD FT SLELLTTYPAGALPDMVSFSKDGRYIAAANEGEPSADYSIDPEGSVTLIDIANGPLNAS FT VIQLDFNAFDMGGSRHSELTDKVRISAPTASVSQDLEPEYLTFSDNGKLYVALQENNAL FT AAIDVESASIDGIFGLGGKSWENAQLDASNKDKTLGNFQNYPMLEGLYMPDSITSYSVN FT GNTYIVTANEGDGREYGVQTTQKQCDEKAYEWDGDDYKGTAEYATKQDFCIAYVDEIRG FT KKLDVDNNHPLASALKDKNQLARLKVVKPQGMLAADEKVQAFGSRSFSIWDESGEFVFD FT SGDEFARIVFEKNKENFNSTNDNNSSADDRSDDKGAEPEAIEVASINGRQYAFIGLERQ FT GGVMVYDVTKPKESRFITYVNNRNFDEPVCTQVDAEGECQNGIYNPKAGDLGPESIKYF FT TRLGDHFIAVGNEVSGTTSVYRIDM" FT sig_peptide 1336870..1336929 FT /locus_tag="VSAL_I1228" FT misc_feature 1336900..1336932 FT /locus_tag="VSAL_I1228" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1338909..1339841 FT /transl_table=11 FT /locus_tag="VSAL_I1229" FT /old_locus_tag="TVS1120" FT /product="putative immunogenic protein precursor" FT /db_xref="InterPro:IPR011852" FT /db_xref="UniProtKB/TrEMBL:B6EJP9" FT /protein_id="CAQ78914.1" FT /translation="MIVFKRNLLLALLFILPSAVNAENYSIGTGGQSGIYYPFGGALAK FT VWSEHVPDVNAKAEVTAASVENTIKVVRGDMIAGIAMGNVVLDAYNGKGKFPKKMPVNT FT LFALYPNLVHTLTLEKSGITSLSQLKGKRVSLGAPASGTAVTSAALLESLGIDVKKDID FT AVYLNYSETTNALANGQIDAGFIVGGQGVGAVTQIALTHKIKVLSITPEESAMFMKKYP FT AYSTYDMPAGVYNNVGEVSTLSVWNVLVVNAKMSDDMAYNLTKAAFENIGDVRKVVKMA FT EMTTPENADRLQGVPLHPGAQKYLDSIIK" FT sig_peptide 1338909..1338974 FT /locus_tag="VSAL_I1229" FT CDS 1339925..1341223 FT /transl_table=11 FT /locus_tag="VSAL_I1230" FT /old_locus_tag="TVS1121" FT /product="DctM-like transport protein" FT /db_xref="InterPro:IPR010656" FT /db_xref="InterPro:IPR011853" FT /db_xref="UniProtKB/TrEMBL:B6EJQ0" FT /protein_id="CAQ78915.1" FT /translation="MDIMTDKNQPDIEHLPHEKTVTVFGYLILGIAVALSMFQIWQGIS FT STISATYFRPIHLCWVLVLIFLHYPLISNRKSHLYLVGRVVDLALCGLIVFAAYRMSIF FT DYNDINHLFYGLQLSDMIAGCSLILLLMEGCRRTVGWVMVLIAVLFLSYSAFGDLLPSG FT FAIKSYSLQELIQFQIFSANGIFGSALGIAATTVFIFVLFGAFLEVTGAGKFFIDLAFS FT IAGKYRGGPAKAAVLASAGLGSISGSAIANTVTTGSITIPMMKKLGYKPEQAAGIEAAA FT STGGQIMPPIMGAGAFVMAQFTGVPYSEIMLASIAPAILYFFCTLLYVHLMACKLNLKA FT VSRTEAVMSVMKDGAHHLIPLALITTLLMMAYSPLLVGVAIGLFYHSTNYAEPFWRWFS FT WYCYYGRFDFSSVERQRAIQSELVFYHYITHLN" FT misc_feature order(1339985..1340047,1340075..1340143,1340162..1340221, FT 1340249..1340317,1340336..1340404,1340477..1340545, FT 1340624..1340692,1340750..1340818,1340852..1340920, FT 1340996..1341064) FT /locus_tag="VSAL_I1230" FT misc_feature 1340294..1341220 FT /locus_tag="VSAL_I1230" FT /note="HMMPfam hit to PF06808, DctM-like transporters,score FT 3.6e-12" FT /inference="protein motif:HMMPfam:PF06808" FT CDS 1341374..1342474 FT /transl_table=11 FT /locus_tag="VSAL_I1231" FT /old_locus_tag="TVS1122" FT /product="extracellular solute-binding protein" FT /db_xref="GOA:B6EJQ1" FT /db_xref="InterPro:IPR001320" FT /db_xref="InterPro:IPR001638" FT /db_xref="UniProtKB/TrEMBL:B6EJQ1" FT /protein_id="CAQ78916.1" FT /translation="MFDEKRGFRHCVISMVIFVAAMIGGIEKSQANTELKVGTYHCPPF FT IFHDKGQEFEGLSMTLWERIAEIMGATYTLQNYELDDLLLASEKGDIDVGISCISITPD FT REARVDFSHSFYETHLAIAVKSRSYFDTFISIVTNPTLWKAIGIFFTVAISVGGFFYLL FT ERKNNDKLYSMPTKKGRLAEALILGVLFITKGPFNYFEFKTLSARVMTVLIAMFSTVFI FT ASITAILTSSLTLEQLRFDVKNVNDLSKLRTGAKQATTASLLLADHSIAHENYQTMDEL FT LLALENDQVDAIVADDAVLRYMIKQGKNKQLFNELVVLPYQLEKQNYGLVLIENSEYEE FT EINRALLQIRETTEWHQILLEYFTEK" FT misc_feature order(1341392..1341451,1341794..1341862,1341923..1341976, FT 1342004..1342072) FT /locus_tag="VSAL_I1231" FT misc_feature 1341476..1342468 FT /locus_tag="VSAL_I1231" FT /note="HMMPfam hit to PF00497, Bacterial extracellular FT solute-binding prot, score 1.6e-19" FT /inference="protein motif:HMMPfam:PF00497" FT CDS complement(1342496..1343359) FT /transl_table=11 FT /locus_tag="VSAL_I1232" FT /old_locus_tag="TVS1123" FT /product="HTH-type transcription regulator, LysR family" FT /db_xref="GOA:B6EJX0" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EJX0" FT /protein_id="CAQ78917.1" FT /translation="MFNLQQLETLILCVECGSFSAAARKLGKAQSAVSTAIANLEIDTG FT VEIFDRSTRLPTLTPHGKRLYTQSIHLLSQAKDIETMLHSFSLGVEDTLTIVINELLLT FT PTFFNVINEFYLYFPHTELHINIAENKDISELVAQGKASIGFMLCDDALPQKVELGLVG FT YLPISMVANNNHPLHSQDSIHLNELKRYHQILLTNMHSPWNVHFSSSVTKTNNASALQS FT LLTVNDSWGFVPDHLTKKNNVLKILDLDSEEKNWLLHIDRVVIKNNNIGQAYSWLYQHS FT VDMFEQ" FT misc_feature complement(1343171..1343350) FT /locus_tag="VSAL_I1232" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protei, score 3.6e-18" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature complement(1343246..1343311) FT /locus_tag="VSAL_I1232" FT /note="Predicted helix-turn-helix motif with score FT 1483.000, SD 4.24 at aa 17-38, sequence FT GSFSAAARKLGKAQSAVSTAIA" FT CDS 1343523..1344458 FT /transl_table=11 FT /locus_tag="VSAL_I1233" FT /old_locus_tag="TVS1124" FT /product="HTH-type transcriptional regulator, LysR family" FT /db_xref="GOA:B6EJX1" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EJX1" FT /protein_id="CAQ78918.1" FT /translation="MHDRASQMVIFYALAKAGSFTAAAKQMGVSTSHVSKQLGILEAEL FT NVKLVQRTTRSLTLTDAGQQFYLYCEKMYSAMTEASAIMDNERDEVAGILRLGLSQSFG FT TMHIIPAIDKLRHQYPDLQVEVRLFDHRADMLKDGLDLWVTNFEDLPEGYVAQRLADSH FT FVLAASPDYLIDKAVPHHPQDLTEHNCLTYQSRHRDYSNWDFSKGNEALCVKVSGNYCV FT DLAEAVRDAAISGWGVAYLASYLLTNEFNDGKLIQLLPDWKASQKMPIYAVYPSRKHLP FT RKISAVIDFLREHIGQPPYWDKTLMKRVKL" FT misc_feature 1343535..1343714 FT /locus_tag="VSAL_I1233" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 1.4e-20" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature 1343574..1343639 FT /locus_tag="VSAL_I1233" FT /note="Predicted helix-turn-helix motif with score FT 1913.000, SD 5.70 at aa 18-39, sequence FT GSFTAAAKQMGVSTSHVSKQLG" FT misc_feature 1343784..1344410 FT /locus_tag="VSAL_I1233" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 7.2e-51" FT /inference="protein motif:HMMPfam:PF03466" FT CDS 1344745..1345950 FT /transl_table=11 FT /locus_tag="VSAL_I1234" FT /old_locus_tag="TVS1125" FT /product="sodium-dependent nucleoside transport protein" FT /db_xref="GOA:B6EJX2" FT /db_xref="InterPro:IPR002668" FT /db_xref="InterPro:IPR008276" FT /db_xref="InterPro:IPR011642" FT /db_xref="InterPro:IPR011657" FT /db_xref="InterPro:IPR018270" FT /db_xref="UniProtKB/TrEMBL:B6EJX2" FT /protein_id="CAQ78919.1" FT /translation="MTSFLGIFAILLFAYLCSTDRRNIPLRTVSLAFGLQILFALLVLY FT VPAGKEVLNSVTAGVSGVIEYGQEGIAFLFGGLATGKVGFVFAVNVLGIIIFFSALISA FT LYHLGIMPKVINFIGGGLQRLLGTGRAESLAATANIFVSMVEAPLVVKPYLKHMSDSQF FT FAVMTCGLASVAGGTMVGYASLGVDLNFLISAAFMSAPAGLLMAKMMVPPGDEENNDDE FT ITSVEIDHATNVFEALADGAMSGLRIAVAVGTTLLAFVSVIALLNGLLGHIGDFFGLKL FT SFELILGYVFAPVAFLLGVPWNEAILAGSLIGNKIVVNEFVAFIQLMEVKDQLSDHSVA FT IVTFALCGFANISTMAILIGGLGSLVPERRSFIAKMGFRAITAGVLANLMSAAIAGVIL FT SL" FT misc_feature 1344745..1344981 FT /locus_tag="VSAL_I1234" FT /note="HMMPfam hit to PF01773, Na+ dependent nucleoside FT transporter N, score 8.1e-35" FT /inference="protein motif:HMMPfam:PF01773" FT misc_feature order(1344754..1344801,1344820..1344888,1344991..1345059, FT 1345231..1345299,1345486..1345554,1345573..1345641, FT 1345765..1345833,1345870..1345938) FT /locus_tag="VSAL_I1234" FT misc_feature 1345006..1345314 FT /locus_tag="VSAL_I1234" FT /note="HMMPfam hit to PF07670, Nucleoside recognition,score FT 9.4e-14" FT /inference="protein motif:HMMPfam:PF07670" FT misc_feature 1345318..1345938 FT /locus_tag="VSAL_I1234" FT /note="HMMPfam hit to PF07662, Na+ dependent nucleoside FT transporter C, score 1.9e-107" FT /inference="protein motif:HMMPfam:PF07662" FT CDS 1346513..1346605 FT /transl_table=11 FT /locus_tag="VSAL_I1235" FT /old_locus_tag="TVS1127" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EJX3" FT /protein_id="CAQ78920.1" FT /translation="MKNETMIEGMEHLFTTMKVPFNGVEEPDSR" FT CDS 1346621..1346725 FT /transl_table=11 FT /locus_tag="VSAL_I1236" FT /old_locus_tag="TVS1128" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EJX4" FT /protein_id="CAQ78921.1" FT /translation="MIRYFLHEKAVMTNGEEHQIKPLFSVKGNDFKVT" FT CDS 1346786..1347229 FT /transl_table=11 FT /locus_tag="VSAL_I1237" FT /old_locus_tag="TVS1129" FT /product="membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EJX5" FT /protein_id="CAQ78922.1" FT /translation="MLERFFEKTMKAYLLGTGFLTATAFMTFLAPEWSMKNIFFYNEAM FT MENKEYFQAIYQHWGVMIGCIGVLLMFSAKYKQLRTSTMIYSAFEKSMFVGLFLYNVCV FT NEYSWFYGWSGGFVLDSFVTIYSLVYLYYYLTRDKLKTPAHLR" FT sig_peptide 1346786..1346872 FT /locus_tag="VSAL_I1237" FT misc_feature order(1346822..1346890,1346948..1347007,1347065..1347124, FT 1347134..1347193) FT /locus_tag="VSAL_I1237" FT CDS join(1347764..1349197,1351522..1351656) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1238" FT /old_locus_tag="TVS1130" FT /product="exported serine protease (pseudogene)" FT /note="Similar to Pseudoalteromonas sp. Serine protease FT MCP-03 preproprotein precursor UniProt:Q1W7M0 fasta scores: FT E()=4.8e-78, 45.194% id in 489 aa. CDS is disrupted by the FT insertion of an IS element after codon 478. The CDS also FT appears to be truncated at the C-terminus" FT /db_xref="PSEUDO:CAQ78923.1" FT /inference="similar to sequence:UniProt:Q1W7M0" FT sig_peptide 1347764..1347835 FT /locus_tag="VSAL_I1238" FT misc_feature 1348184..1349101 FT /locus_tag="VSAL_I1238" FT /note="HMMPfam hit to PF00082, Subtilase family, score FT 1.6e-88" FT /inference="protein motif:HMMPfam:PF00082" FT misc_feature 1348439..1348471 FT /locus_tag="VSAL_I1238" FT /note="PS00137 Serine proteases, subtilase family,histidine FT active site." FT /inference="protein motif:ProSite:PS00137" FT misc_feature 1348976..1349008 FT /locus_tag="VSAL_I1238" FT /note="PS00138 Serine proteases, subtilase family, serine FT active site." FT /inference="protein motif:ProSite:PS00138" FT misc_feature order(1349189..1349197,1351522..1351638) FT /locus_tag="VSAL_I1238" FT /note="HMMPfam hit to PF02839, Carbohydrate binding domain, FT score 4.9e-06" FT /inference="protein motif:HMMPfam:PF02839" FT repeat_region 1349200..1351515 FT /note="VSa2" FT repeat_region 1349200..1349223 FT /note="IR of VSa2" FT CDS 1349281..1349595 FT /transl_table=11 FT /locus_tag="VSAL_I1239" FT /old_locus_tag="TVS1131" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78924.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 1349592..1349939 FT /transl_table=11 FT /locus_tag="VSAL_I1240" FT /old_locus_tag="TVS1132" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78925.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS join(1350011..1351099,1351098..1351499) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1241" FT /old_locus_tag="TVS1135" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. Transposase IS66 FT UniProt:A1RLT8 (500 aa) fasta scores: E()=1.3e-119, 56.5% FT id in 494 aa. CDS contains a frameshift after codon 363" FT /db_xref="PSEUDO:CAQ78926.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT repeat_region 1351492..1351515 FT /note="IR of VSa2" FT CDS complement(1351891..1352463) FT /transl_table=11 FT /locus_tag="VSAL_I1242" FT /old_locus_tag="TVS1137" FT /product="transcriptional regulator, TetR-family" FT /db_xref="GOA:B6EJY0" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011075" FT /db_xref="InterPro:IPR015893" FT /db_xref="InterPro:IPR023773" FT /db_xref="UniProtKB/TrEMBL:B6EJY0" FT /protein_id="CAQ78927.1" FT /translation="MKDMRQSMLDAGFKLINEHGFAGVGLMKIINEAQGTKGSFYHYFK FT SKEHFGETLLSDYFEEHLAILETFLSDDSMTRNERVKAYFQYWATSKLTDDFHIKCLVV FT KLAGEISGASGKMQMVMAEGAEKVIQRMAQFFEQGNTENDFTIQNPEDTSRMIYSLWLG FT STLLAAMQKRREILNNAMKDTLIILKC" FT misc_feature complement(1352302..1352442) FT /locus_tag="VSAL_I1242" FT /note="HMMPfam hit to PF00440, Bacterial regulatory FT proteins, tetR family, score 5.2e-11" FT /inference="protein motif:HMMPfam:PF00440" FT CDS complement(1352593..1353501) FT /transl_table=11 FT /locus_tag="VSAL_I1243" FT /old_locus_tag="TVS1138" FT /product="putative exported amidase" FT /db_xref="GOA:B6EJY1" FT /db_xref="InterPro:IPR002901" FT /db_xref="UniProtKB/TrEMBL:B6EJY1" FT /protein_id="CAQ78928.1" FT /translation="MSLSKKLKHISASLLLIASSSAIANTSLPLSPEKITQPYPEVEVE FT TIHSAQSLISEFKEHQYQLSNITKNSTVPVFFVENLPDDLNSLPVEEKISGFIRLLLPT FT IIDVNKHIITVRNEAISLSKQPKTEWTKEESLWMSNLMASYDVNTNNIDELLLHLDVIP FT VGMVLAQGIDESGWGTSYFAINGNSLFGEHLSSQGGKYLSTPGGHVKVAAFDNLFEGTA FT RYMYNLNTTSAYHDLWTLRQQLRKDNKLSGYELVESLSHYSTRGQAYVDNLQALIKHHH FT LDSFDNVEFNYTTPLRIRFTK" FT misc_feature complement(1352656..1353060) FT /locus_tag="VSAL_I1243" FT /note="HMMPfam hit to PF01832, Mannosyl-glycoprotein FT endo-beta-N-ace, score 0.008" FT /inference="protein motif:HMMPfam:PF01832" FT sig_peptide complement(1353430..1353501) FT /locus_tag="VSAL_I1243" FT CDS complement(1353653..1354150) FT /transl_table=11 FT /gene="ppiB" FT /locus_tag="VSAL_I1244" FT /old_locus_tag="TVS1139" FT /product="peptidyl-prolyl cis-trans isomerase B" FT /EC_number="5.2.1.8" FT /db_xref="GOA:B6EJY2" FT /db_xref="InterPro:IPR002130" FT /db_xref="InterPro:IPR020892" FT /db_xref="UniProtKB/TrEMBL:B6EJY2" FT /protein_id="CAQ78929.1" FT /translation="MIILTTNFGDIHIELNKEKAPVSSKNFLKYCQDGFYEGTIFHRVI FT KGFMIQGGGFTADMQEKEMRAPIVNEANRGLKNLNGTIAMARTDAPHSATSEFFINIAN FT NTFLDHTATTNTGWGYTVFGEVTIGMDVVKKIAKIKTKSMGEFDDVPKESIIIEKVTII FT EE" FT misc_feature complement(1353662..1354150) FT /gene="ppiB" FT /locus_tag="VSAL_I1244" FT /note="HMMPfam hit to PF00160, Cyclophilin type FT peptidyl-prolyl cis-tr, score 4.2e-50" FT /inference="protein motif:HMMPfam:PF00160" FT misc_feature complement(1353992..1354045) FT /gene="ppiB" FT /locus_tag="VSAL_I1244" FT /note="PS00170 Cyclophilin-type peptidyl-prolyl cis-trans FT isomerase signature." FT /inference="protein motif:ProSite:PS00170" FT CDS complement(1354293..1355156) FT /transl_table=11 FT /gene="ampC" FT /locus_tag="VSAL_I1245" FT /old_locus_tag="TVS1140" FT /product="beta-lactamase" FT /db_xref="GOA:B6EJY3" FT /db_xref="InterPro:IPR000871" FT /db_xref="InterPro:IPR001466" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR023650" FT /db_xref="UniProtKB/TrEMBL:B6EJY3" FT /protein_id="CAQ78930.1" FT /translation="MIRKTVLTPFFILFMLFANTSMAASLNDTMIDLEKQTSGDIGVAV FT LDTKTNQIWSYKGNQRFPMMSTFKTLACAKMLHDADKKIINKKTETAIAQKDLIPWSPI FT TEKYVGKSISTEKACEATMLMSDNTAANIVLQQIGSPSSLTAFLRLMGDSTTQLDRIEP FT TLNEAKKGDIRDTTTPIAMVHTINKLLLGNTLTTTDKVTLKKWMMDNKVSDPLLRSILP FT IHWSIADRSGAGGYGSRGITAIIWNEHRLPLIISIYLTQTDLTLAERNDIIVHVGSALF FT TQFNVK" FT misc_feature complement(1354323..1355069) FT /gene="ampC" FT /locus_tag="VSAL_I1245" FT /note="HMMPfam hit to PF00144, Beta-lactamase, score FT 5.3e-31" FT /inference="protein motif:HMMPfam:PF00144" FT misc_feature complement(1354926..1354973) FT /gene="ampC" FT /locus_tag="VSAL_I1245" FT /note="PS00146 Beta-lactamase class-A active site." FT /inference="protein motif:ProSite:PS00146" FT misc_feature complement(1355079..1355138) FT /gene="ampC" FT /locus_tag="VSAL_I1245" FT sig_peptide complement(1355088..1355156) FT /gene="ampC" FT /locus_tag="VSAL_I1245" FT CDS complement(1355161..1356081) FT /transl_table=11 FT /locus_tag="VSAL_I1246" FT /old_locus_tag="TVS1143" FT /product="hypothetical protein" FT /db_xref="GOA:B6EJY4" FT /db_xref="InterPro:IPR001926" FT /db_xref="UniProtKB/TrEMBL:B6EJY4" FT /protein_id="CAQ78931.1" FT /translation="MKIENSPVTQHQFNGVDFYLKRDDQLHPQFSGNKARKFMGLLEGD FT FPNITTLIGYGSPQANSLYSLAALATLKEWHLDFYVDHIPSFLKENPKGNYRAALDLGA FT NIIALNSLESAKQDDGSVLSSLDYIQHIRQPKEHELFVPEGGRCGLAESGVKQLAQELI FT IWKEEQALSSLTVALPSGTGTTALFLHKHLKAHDTKVITCACVGGNQYLTDQFLELGET FT DHPEILTPTKKHHFGKLYRHDYDIWKHLHDQTNVEFELLYDPLMWRCLVDWLPNNPNTT FT LVYIHQGGLLGNESMLPRYIRKYEN" FT CDS complement(1356171..1356515) FT /transl_table=11 FT /locus_tag="VSAL_I1247" FT /old_locus_tag="TVS1144" FT /product="putative HNH endonuclease" FT /db_xref="GOA:B6EJY5" FT /db_xref="InterPro:IPR002711" FT /db_xref="InterPro:IPR003615" FT /db_xref="InterPro:IPR015880" FT /db_xref="UniProtKB/TrEMBL:B6EJY5" FT /protein_id="CAQ78932.1" FT /translation="MSSDFYGSSSTYARQESGYREKALKLYPWVCGNCAREFVYSNLRE FT LTVHHKDHDHTNNPNDGSNWELLCLFCHDHEHSKYTEHDQYGSEIKAGEDDHQSATHNP FT FAALKAMMKK" FT misc_feature complement(1356276..1356431) FT /locus_tag="VSAL_I1247" FT /note="HMMPfam hit to PF01844, HNH endonuclease, score FT 9.3e-05" FT /inference="protein motif:HMMPfam:PF01844" FT CDS complement(1356686..1357129) FT /transl_table=11 FT /locus_tag="VSAL_I1248" FT /old_locus_tag="TVS1145" FT /product="membrane protein" FT /note="Expression may be regulated by Fur" FT /db_xref="UniProtKB/TrEMBL:B6EJY6" FT /protein_id="CAQ78933.1" FT /translation="MNNENLKNLRLKDLEKMIKSHHFWRYLVATTLVVFCMDSLLQHRD FT YFGFVEFRPLFLLITFPLLFLSIRNHNDSVKTDEEKSKDIKRWEIRNLGRYEFIIILLI FT IFLFVPLTFFGQYTAFVHIFKASLITFAIQCLLKKSNNKVNQK" FT misc_feature complement(order(1356719..1356778,1356788..1356856, FT 1356926..1356994,1357007..1357066)) FT /locus_tag="VSAL_I1248" FT CDS 1357404..1357871 FT /transl_table=11 FT /locus_tag="VSAL_I1249" FT /old_locus_tag="TVS1146" FT /product="membrane protein" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EJY7" FT /db_xref="InterPro:IPR007269" FT /db_xref="UniProtKB/TrEMBL:B6EJY7" FT /protein_id="CAQ78934.1" FT /translation="MRSKLELRVPPPLVMLLFMATVFVFDYLAPFNLFYLPWLSYVLVL FT SLITLGGGIALCGVKEFREAKTTVNPLKPESSSSLVSSGIYQYTRNPMYLGLLLALLSS FT VAYTQHPLGLVSALGFVLYMNRFQIEPEEKMLVKLFGEDFKVYANQVKRWF" FT misc_feature order(1357416..1357484,1357512..1357580,1357686..1357754) FT /locus_tag="VSAL_I1249" FT CDS 1358066..1358929 FT /transl_table=11 FT /locus_tag="VSAL_I1250" FT /old_locus_tag="TVS1147" FT /product="HTH-type transcriptional regulator, LysR family" FT /db_xref="GOA:B6EJY8" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EJY8" FT /protein_id="CAQ78935.1" FT /translation="MNSIFGTIDDLFLFCKVVQLGSQQAAAKALGLPVSTVSRRLSLME FT EKLNVRLLEKKGRELVPTQTGQHYYQLLEDQFNLLESNCHQLSEQVEEVVGNIRLSLPY FT RFYNFYVRELITDFLLEFPQTSIEINLCAEDALPKTDRDLVLTFDISRAEDMIARPLFL FT AQHGVFVATSYWDKHKVAQIEELDWIRLDDQKTMTYTDQTQTLKQIHIHPRLQVNDIGQ FT VLHATVKGLGAATLPYHLIMPEMDLIEIFSDHKFPPRQSFLVYKQRKFQPKALAILIER FT LIATMP" FT misc_feature 1358087..1358266 FT /locus_tag="VSAL_I1250" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 5.3e-18" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature 1358126..1358191 FT /locus_tag="VSAL_I1250" FT /note="Predicted helix-turn-helix motif with score FT 2058.000, SD 6.20 at aa 21-42, sequence FT GSQQAAAKALGLPVSTVSRRLS" FT misc_feature 1358336..1358926 FT /locus_tag="VSAL_I1250" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2.1e-13" FT /inference="protein motif:HMMPfam:PF03466" FT CDS 1359029..1359820 FT /transl_table=11 FT /locus_tag="VSAL_I1251" FT /old_locus_tag="TVS1148" FT /product="putative membrane protein" FT /note="Possible alternative translational start site after FT codon 5" FT /db_xref="UniProtKB/TrEMBL:B6EJY9" FT /protein_id="CAQ78936.1" FT /translation="MARCIMKNKIKLVIKIVLFFAFFGVVGHVFAAETLSAKAIVEKSD FT KQMRGESRYIELTMNVIRPDSTRSLSMKSWNKGKDLSLVLVTAPAEERGNASLKRDNEI FT WNWDPRAEKVSKIVPSKLDRFWLASDFTTNDVSNQSSIVADYDQTIIKEEVIDGDKTWV FT IDAIAKPDAPIMLSKVRLWISQKTFIQRKVESYDEFNKLVNTMSTNDIKEFNGRNVATR FT IDMIPANKSGYKTEILINKAHFDFIIDDEFFSKLQMKSLRN" FT sig_peptide 1359029..1359121 FT /locus_tag="VSAL_I1251" FT misc_feature 1359062..1359121 FT /locus_tag="VSAL_I1251" FT CDS complement(1359896..1360810) FT /transl_table=11 FT /locus_tag="VSAL_I1252" FT /old_locus_tag="TVS1149" FT /product="HTH-type transcriptional regulator, LysR family" FT /note="Similar to Escherichia coli Glycine cleavage system FT transcriptional activator GcvA UniProt:P0A9F6 (305 aa) FT fasta scores: E()=2.4e-19, 32.013% id in 303 aa" FT /db_xref="GOA:B6EJZ0" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EJZ0" FT /inference="similar to sequence:UniProt:P0A9F6" FT /protein_id="CAQ78937.1" FT /translation="MAINHKNIPSLSCLIVFEAASRLGTLTKAADELCVTPTAVSKQIK FT KLEAFLNTQLFTRGKQGVELTPKGALYLNSVIEALEILSSQRIPMDDEHNPLPLNIEIG FT TCFSHFWLLPKLDDFRNKYPEITLNLVINNDRNIGDNADYDMAFFYSSMDSINKNNHLL FT FAEKVLLVCSPDFLKKRPECTDLSQLWQQPVIMLKETLSFWEDWQSWADVYGIEYQPPQ FT NVIQVEDQVSVIQAAVNDAGIALAWDWHVRELIEQGRLVALTKPVEFNTNAFFLSVSED FT SDHFASQLFVDWIISTERAYLNS" FT misc_feature complement(1359914..1360537) FT /locus_tag="VSAL_I1252" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 2.3e-17" FT /inference="protein motif:HMMPfam:PF03466" FT misc_feature complement(1360601..1360780) FT /locus_tag="VSAL_I1252" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 2.3e-16" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature complement(1360646..1360738) FT /locus_tag="VSAL_I1252" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature complement(1360676..1360741) FT /locus_tag="VSAL_I1252" FT /note="Predicted helix-turn-helix motif with score FT 2121.000, SD 6.41 at aa 24-45, sequence FT GTLTKAADELCVTPTAVSKQIK" FT CDS 1360921..1362912 FT /transl_table=11 FT /locus_tag="VSAL_I1253" FT /old_locus_tag="TVS1150" FT /product="X-Pro dipeptidyl-peptidase" FT /db_xref="GOA:B6EJZ1" FT /db_xref="InterPro:IPR000383" FT /db_xref="InterPro:IPR005674" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013736" FT /db_xref="UniProtKB/TrEMBL:B6EJZ1" FT /protein_id="CAQ78938.1" FT /translation="MNTVKEIHHDYLTLPDGTRLAYRAWMPEDAHTNPVPAILEFLPYR FT KNDGTIIRDEITMPQTAAQGYACVRVDLRGCGESEGFMTDEYSTQELQDGCDVITWIAA FT QAWCNGNLGMVGISWGGFNSLQVAALNPPALKAIITQCSTDDRYRDDIHFNGGCLLNDN FT MDWAAFFWAYAQGRSPDKALVGENWKEIWLERLENMPFLAKPWLTEQIRNDYWKHGSVC FT EKYSDIKIPVYAMGGWADGYRNTVFTLLQNLDVPTKGLVGPWAHKYPNIAFPNPKMDYV FT KESVRWWDRWLKGIDNGIMDEPKLNYYLQDSVTPATDYDTRPGKWVSEPDWPSDNTQYQ FT IWHLSDSGLKTTASESDTMSICSPQTVGLDGGRFCAGIRLDMEHPADQRIDDSGSLVFD FT SLILEQEVSIAGQVLANLNLSSDKPQASVIVRISDVHPNGQVTKVSHGILNLTHRDSHE FT FPQALNPDERYDIEIKVNHMAYVIPKGHKIRIAISTAYWPLIWPTADNATLTVYPQHSS FT ITLPVNAQPICSKSVPEHNKTVSFNGKILRPSDSKRVTHRDYKTGVVTLETMEDFGRQF FT YESSQSEIDFIIHQELSIHPDDPLSAKNDIRLKVDMGREGWWTGIECHYEMICDHDYFY FT ITANWKAFYDNDVVFEKQFTETIKRHFM" FT misc_feature 1360966..1361724 FT /locus_tag="VSAL_I1253" FT /note="HMMPfam hit to PF02129, X-Pro dipeptidyl-peptidase FT (S15 family), score 1.9e-81" FT /inference="protein motif:HMMPfam:PF02129" FT misc_feature 1361773..1362477 FT /locus_tag="VSAL_I1253" FT /note="HMMPfam hit to PF08530, X-Pro dipeptidyl-peptidase FT C-terminal n, score 1.2e-57" FT /inference="protein motif:HMMPfam:PF08530" FT CDS 1362933..1364456 FT /transl_table=11 FT /locus_tag="VSAL_I1254" FT /old_locus_tag="TVS1151" FT /product="transporter, BCCT family" FT /note="Similar to Marinococcus halophilus Ectoine FT transporter EctM UniProt:Q6VTH4 (525 aa) fasta scores: FT E()=5e-45, 27.733% id in 494 aa" FT /db_xref="GOA:B6EJZ2" FT /db_xref="InterPro:IPR000060" FT /db_xref="UniProtKB/TrEMBL:B6EJZ2" FT /inference="similar to sequence:UniProt:Q6VTH4" FT /protein_id="CAQ78939.1" FT /translation="MLKSIRPLVFFPTFLVLVAALILSLVDLKSFTALTSAANSFVLDK FT FSWLFSFGSFYLLVLIVITYFSKISDVRIGGENSVPRISKPRWFMIVLCTTLAVGVLFW FT TTAEPIYHLHTPPESLGIEPGSPNAILFAFSAMFLHWGPTPYAIYAVPALIFALTFYNL FT KLPFSITSPLRPIFGRYINDKVADVIDALALYSLVVGMASSLGTGALTMLGGVSQFIDI FT ERNAVTLGIFIAMIVVTFLVSAASGLTKGIARLSAANFWMLIALLVFVFICGPTVYILS FT IGVEGLGAYLQNFFRLSLFTGQAANDPWPQYWSVFYWAVWFAWAPITAMFLGKIARGYT FT VKEFIQMNVIYPSLFILVWVSVFSGTAVHMDTETNGGLNDILSNGGIEQLLYYIVHQLP FT FGGVTSFFLVLVAFISYVTAADSSTDAIGDLCTKGFNSDSEDGTSLPIKMLWGTIIGLV FT AWIMVSTVGIDGVKQLSNLGGLPATIIILCCSLTLIYWIRKPEMLTGKK" FT sig_peptide 1362933..1363043 FT /locus_tag="VSAL_I1254" FT misc_feature order(1362951..1363010,1363068..1363133,1363194..1363253, FT 1363353..1363421,1363512..1363580,1363608..1363676, FT 1363710..1363778,1363872..1363940,1363974..1364042, FT 1364115..1364183,1364277..1364336,1364364..1364423) FT /locus_tag="VSAL_I1254" FT misc_feature 1362957..1364432 FT /locus_tag="VSAL_I1254" FT /note="HMMPfam hit to PF02028, BCCT family FT transporter,score 3.9e-66" FT /inference="protein motif:HMMPfam:PF02028" FT CDS 1364764..1365657 FT /transl_table=11 FT /gene="dnaJ" FT /locus_tag="VSAL_I1255" FT /old_locus_tag="TVS1152" FT /product="chaperone protein DnaJ" FT /db_xref="GOA:B6EJZ3" FT /db_xref="InterPro:IPR001623" FT /db_xref="InterPro:IPR002939" FT /db_xref="InterPro:IPR003095" FT /db_xref="InterPro:IPR008971" FT /db_xref="InterPro:IPR018253" FT /db_xref="UniProtKB/TrEMBL:B6EJZ3" FT /protein_id="CAQ78940.1" FT /translation="MSKRDYYEVLGVSKSSTEKEIKKAYKRLAMKYHPDKNQGDPQAAD FT KFKEIKEAYEILTDADKRGQYDDYGHAAFQNGGSGGGGFGGQSQGYGGFEDIFGGAFGG FT GGRSRGGFEDMFSQQRRPRPQKGQDRQFNLTVEFADAINGCEQVIELPINGENKKINVK FT VPAGIDDGEKIRFSGKGESGANGGPAGDLLIQINTRPHEILKRDGNDLICPVTMDFATA FT ALGGEVEIQTLESRFKLKVPAGTQSGRKFRMKDKGVKGRKGITGDLMVEIIVATPTNLT FT DKQKELLMAFRDLATA" FT misc_feature 1364776..1364964 FT /gene="dnaJ" FT /locus_tag="VSAL_I1255" FT /note="HMMPfam hit to PF00226, DnaJ domain, score 7.8e-38" FT /inference="protein motif:HMMPfam:PF00226" FT misc_feature 1364902..1364961 FT /gene="dnaJ" FT /locus_tag="VSAL_I1255" FT /note="PS00636 Nt-dnaJ domain signature." FT /inference="protein motif:ProSite:PS00636" FT misc_feature 1365277..1365639 FT /gene="dnaJ" FT /locus_tag="VSAL_I1255" FT /note="HMMPfam hit to PF01556, DnaJ C terminal region,score FT 1.6e-56" FT /inference="protein motif:HMMPfam:PF01556" FT repeat_region 1365753..1368066 FT /note="VSa2" FT repeat_region 1365753..1365776 FT /note="IR of VSa2" FT CDS 1365834..1366148 FT /transl_table=11 FT /locus_tag="VSAL_I1256" FT /old_locus_tag="TVS1153" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78941.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 1366145..1366492 FT /transl_table=11 FT /locus_tag="VSAL_I1257" FT /old_locus_tag="TVSb0014" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78942.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS join(1366564..1367223,1367223..1368050) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1258" FT /old_locus_tag="TVS1157" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. Transposase IS66 FT UniProt:A1RLT8 (500 aa) fasta scores: E()=3.5e-120, 57.1% FT id in 496 aa. CDS contains a frameshift after codon 220" FT /db_xref="PSEUDO:CAQ78943.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT repeat_region 1368043..1368066 FT /note="IR of VSa2" FT CDS complement(1368340..1369143) FT /transl_table=11 FT /locus_tag="VSAL_I1259" FT /old_locus_tag="TVS1158" FT /product="HTH-type transcription regulator, RpiR family" FT /db_xref="GOA:B6EJZ7" FT /db_xref="InterPro:IPR000281" FT /db_xref="InterPro:IPR001347" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EJZ7" FT /protein_id="CAQ78944.1" FT /translation="MSILEKIQNQRSNLSANGIKILDFILEQPAAIGAYSSQELANRVQ FT VSQSSIIKLTQKLGFKGFTAFKLAIIEDIGRKHAILEPEKPIHNKIHSDDSSLTMAQKL FT VQEKHHALVATTNAIDYQEFEHIISLLNNANRIQIIGIGGSALTAKDLSFKLLKIGMTA FT LSEQDSHVQIATANTLSNTDVQMAIEKGATVIALTSTKKSPLRKVASYCIDTIADERQF FT RSSSISSRTAQNVITDLIFMTLFQLRSDSAKLLIDKISSTIDSIR" FT misc_feature complement(1368424..1368762) FT /locus_tag="VSAL_I1259" FT /note="HMMPfam hit to PF01380, SIS domain, score 6.2e-06" FT /inference="protein motif:HMMPfam:PF01380" FT misc_feature complement(1368808..1369143) FT /locus_tag="VSAL_I1259" FT /note="HMMPfam hit to PF01418, Helix-turn-helix domain,rpiR FT family, score 3.1e-29" FT /inference="protein motif:HMMPfam:PF01418" FT misc_feature complement(1368976..1369041) FT /locus_tag="VSAL_I1259" FT /note="Predicted helix-turn-helix motif with score FT 1253.000, SD 3.45 at aa 35-56, sequence FT YSSQELANRVQVSQSSIIKLTQ" FT CDS 1369405..1370307 FT /transl_table=11 FT /locus_tag="VSAL_I1260" FT /old_locus_tag="TVS1159" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EJZ8" FT /db_xref="InterPro:IPR001347" FT /db_xref="InterPro:IPR005486" FT /db_xref="InterPro:IPR005488" FT /db_xref="UniProtKB/Swiss-Prot:B6EJZ8" FT /protein_id="CAQ78945.1" FT /translation="MKIDLTTLVTESRNQASEQIDVLSTVEMLTVINKEDQKVALAVEA FT ILPQIAEVVDAIAVAFQCGGRLIYIGAGTSGRLGILDASECPPTYGSNPDLVVGLIAGG FT HKAILKAVENAEDNRELGASDLQDLGLNEKDVLVGIAASGRTPYVLGAMAYAKSVGATV FT ATLSCNPNSPMTELADINMTPVVGPEIVTGSSRMKAGTAQKLVLNMLTTGAMIRTGKVF FT GNLMVDVEATNAKLVQRQKNIVIEATGCSETEAAESLSQCNNHCKTAILIVLSGLDAKS FT ATDKLTEYNGFIRDALANS" FT misc_feature 1369963..1370016 FT /locus_tag="VSAL_I1260" FT /note="PS01272 Glucokinase regulatory protein family FT signature." FT /inference="protein motif:ProSite:PS01272" FT CDS join(1370367..1370702,1370702..1370842,1370842..1371165) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1261" FT /old_locus_tag="TVS1160" FT /product="PTS system EIIB, membrane component (pseudogene)" FT /EC_number="2.7.1.69" FT /note="Similar to Vibrio fischeri PTS FT system,sucrose-specific IIBC component UniProt:Q5E5T6 (484 FT aa) fasta scores: E()=2.1e-40, 48.554% id in 484 aa. CDS FT contains frameshifts after codon 112 and 159 and appears to FT have a deletion of around 200 amino acid residues after FT codon 180 in comparison to orthologues. The sequence has FT been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ78946.1" FT /inference="similar to sequence:UniProt:Q5E5T6" FT misc_feature 1370391..1370495 FT /locus_tag="VSAL_I1261" FT /note="HMMPfam hit to PF00367, phosphotransferase FT system,EIIB, score 5e-14" FT /inference="protein motif:HMMPfam:PF00367" FT misc_feature 1370427..1370480 FT /locus_tag="VSAL_I1261" FT /note="PS01035 PTS EIIB domains cysteine phosphorylation FT site signature." FT /inference="protein motif:ProSite:PS01035" FT misc_feature order(1370932..1371000,1371058..1371126) FT /locus_tag="VSAL_I1261" FT CDS 1371318..1371857 FT /transl_table=11 FT /locus_tag="VSAL_I1262" FT /old_locus_tag="TVS1162" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009822" FT /db_xref="UniProtKB/TrEMBL:B6EK00" FT /protein_id="CAQ78947.1" FT /translation="MAIKPTIYKFRIALTDLNRDHYDSVSLTIAQHPSESEERMMARVL FT AFCLNAEERLTFTKGLSAIDEPDIWVREYDDTISLWIDAGEPDPERMKKASRQSKVTKV FT YSFNSKSEVWWKQNQSKFKQYPVDVVRFDSVQIHSFSALLERTMEMSVMITGDSAFISA FT AKGDCEVTWETLQSVE" FT misc_feature 1371321..1371854 FT /locus_tag="VSAL_I1262" FT /note="HMMPfam hit to PF07152, YaeQ protein, score 1.8e-98" FT /inference="protein motif:HMMPfam:PF07152" FT CDS 1371953..1372681 FT /transl_table=11 FT /locus_tag="VSAL_I1263" FT /old_locus_tag="TVS1163" FT /product="membrane protein" FT /db_xref="GOA:B6EK01" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:B6EK01" FT /protein_id="CAQ78948.1" FT /translation="MELPLMDLGLLFAMILIFIGSFVQSAIGFGLAIVTAPLLFLISPS FT YVPAPIVIVGLFLSIINAYKYKENVSFRGLGYAFLGRIPGSILGGLLLYYVDAKLLSLW FT IGVVVLLAVVVSLLPFRIEPNNSRMTIAGFFSGLFGTSSGIGGPPMALLLQHQEANLIR FT ANLSAFFVVSSLISLAVQVPAGYMSMSHLYLTLPLLPASYVGYLVAMKVVDRIDKETIR FT NVSLVMCSISGVAAIVLALR" FT sig_peptide 1371953..1372027 FT /locus_tag="VSAL_I1263" FT misc_feature order(1371980..1372048,1372067..1372135,1372178..1372237, FT 1372250..1372318,1372346..1372414,1372433..1372501, FT 1372529..1372582,1372619..1372675) FT /locus_tag="VSAL_I1263" FT misc_feature 1371983..1372663 FT /locus_tag="VSAL_I1263" FT /note="HMMPfam hit to PF01925, Domain of unknown function FT DUF81, score 1.1e-35" FT /inference="protein motif:HMMPfam:PF01925" FT CDS complement(1372689..1373696) FT /transl_table=11 FT /locus_tag="VSAL_I1264" FT /old_locus_tag="TVS1164" FT /product="HTH-type transcriptional regulator, LysR-family" FT /db_xref="GOA:B6EK02" FT /db_xref="InterPro:IPR000847" FT /db_xref="InterPro:IPR005119" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:B6EK02" FT /protein_id="CAQ78949.1" FT /translation="MNTSRLKDHVIRLYFVEIPDNLTFTVSFFEHMDFRCKVMDRLTAL FT HVFVTIVEQKSLSAAADHLDMSRAKVSRYLAELESWMDVRLLHRTTRSLSLTTPGEETL FT DAARNLLALAGTLDGIRNQNTVKLKGQLRITASYSLIDSCLIDVIDEFVTMWPETSIDI FT LSTDESVNIIESRIDLAIRITNDVEPNIVAKRLGECRSIICASPSYLAKNGTPQNVQAL FT SQHNCLSYTYFGRSAWVFDGPNGPESVPITGNISANLSEVLLAATLRGNGISQQPLPTV FT QPLINRGDLVALLPEWQPKILNVYAIYATRKQVTPLQRAFIDFLTKRMKTSRYW" FT misc_feature complement(1372707..1373324) FT /locus_tag="VSAL_I1264" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 9.7e-41" FT /inference="protein motif:HMMPfam:PF03466" FT misc_feature complement(1373394..1373573) FT /locus_tag="VSAL_I1264" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix, score 1.4e-17" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature complement(1373469..1373534) FT /locus_tag="VSAL_I1264" FT /note="Predicted helix-turn-helix motif with score FT 1665.000, SD 4.86 at aa 55-76, sequence FT KSLSAAADHLDMSRAKVSRYLA" FT CDS 1373725..1373901 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1265" FT /old_locus_tag="TVS1165" FT /product="putative exported protein (pseudogene)" FT /note="Similar to Vibrio cholerae Hypothetical protein FT UniProt:Q9KKQ3 (292 aa) fasta scores: E()=1.3e-06, 54.902% FT id in 51 aa. CDS is truncated by the insertion of the FT downstream IS element and subsequent recombination events" FT /inference="similar to sequence:UniProt:Q9KKQ3" FT sig_peptide 1373725..1373787 FT /locus_tag="VSAL_I1265" FT repeat_region 1373905..1376219 FT /note="VSa2" FT repeat_region 1373905..1373928 FT /note="IR of VSa2" FT CDS 1373986..1374300 FT /transl_table=11 FT /locus_tag="VSAL_I1266" FT /old_locus_tag="TVS1166" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78951.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS join(1374297..1374434,1374434..1374643) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1267" FT /old_locus_tag="TVSb0016" FT /product="transposase (pseudogene)" FT /note="Similar to Pseudoalteromonas haloplanktis (strain FT TAC 125) putative orphan protein putative transposase (is66 FT family element,orf2-like). UniProt:Q3IIG1 (EMBL:CR954246) FT (115 aa) fasta scores: E()=6e-32, 58.261% id in 115 aa. CDS FT contains a frameshift after codon 46" FT /db_xref="PSEUDO:CAQ78952.1" FT /inference="similar to sequence:UniProt:Q3IIG1" FT CDS join(1374715..1375488,1375490..1376203) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1268" FT /old_locus_tag="TVS1169" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. Transposase IS66 FT UniProt:A1RLT8 (500 aa) fasta scores: E()=2.2e-113, 55.4% FT id in 498 aa. CDS contains a frameshift after codon 258" FT /db_xref="PSEUDO:CAQ78953.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT repeat_region 1376196..1376219 FT /note="IR of VSa2" FT CDS complement(1376340..1377029) FT /transl_table=11 FT /locus_tag="VSAL_I1269" FT /old_locus_tag="TVS1170" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR024434" FT /db_xref="UniProtKB/TrEMBL:B6EK06" FT /protein_id="CAQ78954.1" FT /translation="MVKKIDSKIIGFKVKSKEDIAQVQVAETEETIEQMHEMIQRPEKL FT LGSTYKLKTPEHVSEHSLFITINDVILNEGTKHEIRRPFEMFINSKSLEHYQWIIALTR FT IMSAVFRKGGDCTFLVEELRSVFDPRGGYWNKGKYVPSLIAEIGNVIEQHLKDIGLIED FT PEMDKHQKAFLDAKKAELATKEEPKEEKIESSFPPSATLCYKCHNKSVVVKDGCQTCLN FT CGDSKCG" FT misc_feature complement(1376406..1376423) FT /locus_tag="VSAL_I1269" FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT /inference="protein motif:ProSite:PS00190" FT CDS complement(1377116..1379269) FT /transl_table=11 FT /locus_tag="VSAL_I1270" FT /old_locus_tag="TVS1171" FT /product="ribonucleotide reductase" FT /note="Similar to Thermotoga maritima ribonucleotide FT reductase (B12-dependent) PDB 1XJE, Evalue 9e-56" FT /db_xref="GOA:B6EK07" FT /db_xref="InterPro:IPR000788" FT /db_xref="InterPro:IPR013344" FT /db_xref="InterPro:IPR013509" FT /db_xref="UniProtKB/TrEMBL:B6EK07" FT /protein_id="CAQ78955.1" FT /translation="MPQSKNATVSLANPTEIAYQSTSMDIWESKYCLKNKQGNRVDLSM FT DDTFKRVAKALSDLEQPAEQKQWNEQFLWALRNGAIPAGRITSNAGAFEHKPATSTINC FT TVSGTIVDSMDDILGKVHEAGLTLKAGCGIGYDFSTLRPRGAFVSGAGAYTSGPLSFMD FT IYDKMCFTVSSAGGRRGAQMGTMDIRHPDVIDFIRAKREDGRLRQFNLSLLITEDFVEA FT VKNQNDWQLIFPITLKEAKLDHMDLYSDNSVVWADWPVKEGFAENEEGLVACKVYRTMP FT AQNLWNIIMTSTYDYAEPGFILIDKVNQMNNNWFCEEIRATNPCGEQPLPPYGACLLGS FT INLTKFVRNPFTDTAFFDWDAYRNVVSIFTRMLDNVVEINQLPLEQQRHEIMHKRRHGM FT GFLGLGSTLTMLQHKYGSIESIGFTEQVAQEMAVTGWKSGLDLAAEKGSAPIMEESFIV FT TAKMLRQRPEMAEDGIKLGDKVKGKVLHAKYSRYMQQLAIIEPKLVAKIIEQGVRFTHH FT SSIAPTGTISLSLANNASNGIEPSFAHHYTRNVIKTGKKSKESVDVYSYELLAYRALIN FT DKAMPYSTNEENKLPDYFITADDITPQQHVAVQAAAQKWIDSSISKTANIPTDFPFEEF FT KDIYMDAYDKGLKGCTTFRFNPEVFQGVLVKEEDLENTTYCFTLEDGSTLEAKGNEKIE FT YDGEMHTAANLYDALKEGYYGKF" FT misc_feature complement(1377308..1378960) FT /locus_tag="VSAL_I1270" FT /note="HMMPfam hit to PF02867, Ribonucleotide FT reductase,barrel doma, score 1.6e-13" FT /inference="protein motif:HMMPfam:PF02867" FT CDS 1379624..1380955 FT /transl_table=11 FT /locus_tag="VSAL_I1271" FT /old_locus_tag="TVS1172" FT /product="putative response regulator" FT /EC_number="4.6.1.-" FT /note="Similar to caulobacter crescentus (caulobacter FT vibrioides) Response regulator PleD UniProt:Q9A5I5 (454 aa) FT fasta scores: E()=4.5e-16, 31.447% id in 318 aa" FT /db_xref="GOA:B6EK08" FT /db_xref="InterPro:IPR000160" FT /db_xref="InterPro:IPR001054" FT /db_xref="InterPro:IPR008979" FT /db_xref="UniProtKB/TrEMBL:B6EK08" FT /inference="similar to sequence:UniProt:Q9A5I5" FT /protein_id="CAQ78956.1" FT /translation="MRVFQKIIIGMLILSISALIWHHFWGDTKTLTISPEKYSYYGTDD FT RKVGGISEATLIDKNNVPSMLCNMKKGDYAWPYCEAAIHLSGSIFEGIDLSDYSTLVLD FT IDYKSTDPNGRLRVYLRNSNPAYTKRNDAASLKFNGIEYEPGFKTGPKEILLSDFQVLT FT WWIADYKVAVEHAAPEFSNVSIIEIATSSGLSVGNFEMTINSIELRGSWVKETTLLKFI FT LYAWLVMIIGYILYEQKGLNRRLKASTYRETKLQKMNDNLKEKNVEFAELAHRDSLTGA FT RNRNAVRDWLDRMSQQVRWGKQQFSVIYIDIDFFKGINDKLGHQVGDDILREFVLVVTG FT SIKTTDFLVRWGGEEFIVFSPQTGLDQAFEKAEHIRRTVEHHLWCHNESLTCSFGVAEM FT GNERISEVIARADDALYKAKNQGRNRVVRSNNLPDQRLVSRFMD" FT sig_peptide 1379624..1379701 FT /locus_tag="VSAL_I1271" FT misc_feature order(1379642..1379698,1380272..1380331) FT /locus_tag="VSAL_I1271" FT misc_feature 1380428..1380898 FT /locus_tag="VSAL_I1271" FT /note="HMMPfam hit to PF00990, GGDEF domain, score 1.9e-48" FT /inference="protein motif:HMMPfam:PF00990" FT CDS complement(1381019..1381696) FT /transl_table=11 FT /gene="sanA" FT /locus_tag="VSAL_I1272" FT /old_locus_tag="TVS1173" FT /product="vancomycin resistance protein SanA" FT /db_xref="InterPro:IPR003848" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:B6EK09" FT /protein_id="CAQ78957.1" FT /translation="MKILFPSKLKKWLKIILLVSGIFVAIVLLMDLYISLSTQSQLYDD FT IQALPTQETALVLGTSKYIRRTLNPYYQYRIDAAIELFKQNKVSHFLLSGDNAHRSYNE FT PWTMKRDLLKAGVPEENITLDYAGFRTLDSVLRAKDIFDVESLTIVTQQFHCQRALFIS FT NHSDMDAVCLVVPSPTGWANTKIRIREVLARTKAMLDLYIFNVQPKFLGPKEPIQHKTI FT PVE" FT misc_feature complement(1381115..1381546) FT /gene="sanA" FT /locus_tag="VSAL_I1272" FT /note="HMMPfam hit to PF02698, DUF218 domain, score FT 9.1e-43" FT /inference="protein motif:HMMPfam:PF02698" FT sig_peptide complement(1381577..1381696) FT /gene="sanA" FT /locus_tag="VSAL_I1272" FT misc_feature complement(1381595..1381663) FT /gene="sanA" FT /locus_tag="VSAL_I1272" FT CDS complement(1381724..1382056) FT /transl_table=11 FT /locus_tag="VSAL_I1273" FT /old_locus_tag="TVS1174" FT /product="membrane protein" FT /db_xref="InterPro:IPR021813" FT /db_xref="UniProtKB/TrEMBL:B6EK10" FT /protein_id="CAQ78958.1" FT /translation="MNLIISFFNTMGSYLTPYLSDISVAMIACALVMLGGDINRAVRAF FT LSGKHFLIRTGAFIGINAFGYGLLIVKAAPLLSSTLRSIQPAFMLAIVLSTFIIIGAWA FT QKNRQV" FT misc_feature complement(order(1381745..1381798,1381826..1381894, FT 1381955..1382014)) FT /locus_tag="VSAL_I1273" FT CDS complement(1382175..1383863) FT /transl_table=11 FT /gene="sfcA" FT /locus_tag="VSAL_I1274" FT /old_locus_tag="TVS1175" FT /product="NAD-dependent malic enzyme" FT /EC_number="1.1.1.38" FT /db_xref="GOA:B6EK11" FT /db_xref="InterPro:IPR001891" FT /db_xref="InterPro:IPR012301" FT /db_xref="InterPro:IPR012302" FT /db_xref="InterPro:IPR015884" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR023667" FT /db_xref="UniProtKB/Swiss-Prot:B6EK11" FT /protein_id="CAQ78959.1" FT /translation="MNNHIRPLYIPYAGPALLSTPLLNKGSAFSTTERKYFNLEGLLPE FT AIESIEEQTGRAYKQYQSFENDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPT FT VGAACENFSNIYRRGRGLFISYENKNRIDDLLNNAANQNVKVIVVTDGERILGLGDQGI FT GGMGIPIGKLALYTACGGISPAHTLPIVLDVGTNNPQRLADPMYMGWRHPRVTGNEYKD FT FVEEFIQAVQRRWPQALVQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLLA FT ACKAAGSSLAQQRVTFLGAGSAGCGIAEAIIAQMVSEGISDAQARSQVYMVDRWGLLQE FT GMPNLLDFQQRLVQKAENTKEWVSEEPNYSLFDVMHNAKPTVLIGVSGAPGLFSKEVIQ FT EMHKHCERPIVFPLSNPTSRVEATPNDIIRWTDGQALVATGSPFDPVTHNGQTYPIAQC FT NNSFIFPGIGLGVLAIKATRVSDEMLRESSRALSECSPLAINGSGALLPPLEEIHTVSK FT KIAFAVAKKAIEQGYALEITDEALMQKIEQYFWKPVYRRYKRTAF" FT misc_feature complement(1382280..1383062) FT /gene="sfcA" FT /locus_tag="VSAL_I1274" FT /note="HMMPfam hit to PF03949, Malic enzyme, NAD binding FT domain, score 2.1e-140" FT /inference="protein motif:HMMPfam:PF03949" FT misc_feature complement(1383024..1383074) FT /gene="sfcA" FT /locus_tag="VSAL_I1274" FT /note="PS00331 Malic enzymes signature." FT /inference="protein motif:ProSite:PS00331" FT misc_feature complement(1383066..1383629) FT /gene="sfcA" FT /locus_tag="VSAL_I1274" FT /note="HMMPfam hit to PF00390, Malic enzyme, N-terminal FT domain, score 6.2e-121" FT /inference="protein motif:HMMPfam:PF00390" FT CDS 1384018..1385565 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1275" FT /old_locus_tag="TVS1176" FT /product="helicase (fragment)" FT /EC_number="3.6.1.-" FT /note="Similar to Escherichia coli ATP-dependent RNA FT helicase HrpB UniProt:P37024 (809 aa) fasta scores: FT E()=9.2e-30, 31.140% id in 456 aa. CDS is truncated by the FT insertion of the downstream IS element and subsequent FT recombination events" FT /inference="similar to sequence:UniProt:P37024" FT misc_feature 1384036..1384485 FT /locus_tag="VSAL_I1275" FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score FT 1.4e-06" FT /inference="protein motif:HMMPfam:PF00270" FT misc_feature 1384699..1384968 FT /locus_tag="VSAL_I1275" FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 2.7e-11" FT /inference="protein motif:HMMPfam:PF00271" FT misc_feature 1385137..1385406 FT /locus_tag="VSAL_I1275" FT /note="HMMPfam hit to PF04408, Helicase associated domain FT (HA2), score 0.0052" FT /inference="protein motif:HMMPfam:PF04408" FT repeat_region 1385568..1386572 FT /note="VSa6" FT repeat_region 1385568..1385586 FT /note="IR of VSa6" FT CDS 1385664..1386545 FT /transl_table=11 FT /locus_tag="VSAL_I1276" FT /old_locus_tag="TVS1177" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ78961.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature 1385991..1386485 FT /locus_tag="VSAL_I1276" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region 1386554..1386572 FT /note="IR of VSa6" FT CDS 1386605..1387348 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1277" FT /old_locus_tag="TVS1178" FT /product="hypothetical protein (fragment)" FT /note="Similar to Vibrio fischeri Hypothetical protein FT UniProt:Q5E4I9 (446 aa) fasta scores: E()=1.7e-89, 84.337% FT id in 249 aa. CDS is truncated by the insertion of the FT upstream and downstream IS elements and subsequent FT recombination events" FT /inference="similar to sequence:UniProt:Q5E4I9" FT repeat_region 1387349..1389663 FT /note="VSa2" FT repeat_region 1387349..1387372 FT /note="IR of VSa2" FT CDS 1387430..1387744 FT /transl_table=11 FT /locus_tag="VSAL_I1278" FT /old_locus_tag="TVS1179" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78963.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 1387741..1388088 FT /transl_table=11 FT /locus_tag="VSAL_I1279" FT /old_locus_tag="TVS1179b" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78964.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 1388160..1389647 FT /transl_table=11 FT /locus_tag="VSAL_I1280" FT /old_locus_tag="TVS1181" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EHG8" FT /protein_id="CAQ78965.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 1389640..1389663 FT /note="IR of VSa2" FT CDS complement(1390096..1391400) FT /transl_table=11 FT /locus_tag="VSAL_I1281" FT /old_locus_tag="TVS1182" FT /product="sodium/dicarboxylate symporter" FT /db_xref="GOA:B6EK16" FT /db_xref="InterPro:IPR001991" FT /db_xref="UniProtKB/TrEMBL:B6EK16" FT /protein_id="CAQ78966.1" FT /translation="MTNDNKKIKSSLTARIITGMVAGILCGFLIRTFLGDNSFINEYLV FT NGLFDVGGKIFIASLKMLVIPLVFVSLVCGTSSLKDMTTLGRLGGKTLAFYIGTTALAI FT SLALIMGIFLHPGAGADLTSAASFSTAEAPSLGQVIVGMFPSNPMAAMSQGNTLQVIVF FT AVLFGIAISLAGEAGQRVSDFFSDVNEVIMKLVTLLMKVAPYGIFFLMAKLFTGLGLDS FT IANLAAYFLVLVAALLIHAFVTYSILLKVLSGLSPIVFWKKMKDAIMFAFSTASSNATI FT PVTMETATHRLGVSNKVASFTIPLGATINMDGTAIMQGVATAFIAQAFGVDLSIGDYMT FT VILTATLASVGTAGVPGVGLIMLAMVLNQVGLPLEGIALIMGVDRLLDMIRTAVNITGD FT SVVTCIVAKSENELDIDAFNDPKAGEAELALKRSA" FT misc_feature complement(1390174..1391367) FT /locus_tag="VSAL_I1281" FT /note="HMMPfam hit to PF00375, Sodium:dicarboxylate FT symporter family, score 9.1e-121" FT /inference="protein motif:HMMPfam:PF00375" FT misc_feature complement(order(1390312..1390380,1390654..1390722, FT 1390750..1390818,1390879..1390947,1391059..1391127, FT 1391164..1391232,1391299..1391367)) FT /locus_tag="VSAL_I1281" FT CDS 1392050..1393654 FT /transl_table=11 FT /locus_tag="VSAL_I1282" FT /old_locus_tag="TVS1183" FT /product="transporter, BCCT family" FT /note="Similar to bacillus subtilis Glycine betaine FT transporter OpuD UniProt:P54417 (512 aa) fasta scores: FT E()=4.2e-61, 38.763% id in 485 aa" FT /db_xref="GOA:B6EK17" FT /db_xref="InterPro:IPR000060" FT /db_xref="InterPro:IPR018093" FT /db_xref="UniProtKB/TrEMBL:B6EK17" FT /inference="similar to sequence:UniProt:P54417" FT /protein_id="CAQ78967.1" FT /translation="MGFKSEKYSIESTDYEVGQDNISKWGMDVHNTVFVASVGLSLLFI FT ITLLALPPADAKAAIDSLKGSVLSNFDFLFMWGANILLIFAIILAFSPLGKIRLGGDDA FT KPDYSKASWISMLFAAGMGIGLIFWGVAEPTAFFTNWFGTPLNVEPFTEAGRELALGAT FT VFHWGLHAWAIYGMTALCLAYFVYNKGLPLSMRSVFYPLLGDRVWGRTGDVIDILTVLV FT TLFGLATSLGLGGTQAASGISHVFGIDNNIYLQQAVIVLIMGLAIISVLRGMDGGVKFL FT SNLNMVIAFVFLGLIAVLNFTTVLDSLVTALTGYVKNIIPLSQTSGREDTAWLHGWTVF FT YWAWWVAYAPFFGMFVARISRGRTVREFLLCVMLIPTMVTTAWMSIFGGVAIQQVIDKV FT GLLGAQQGISDVSLSLFHMLDAYPFGDILSFIAVALIIVFFVTTLDSGSIVIDGMTAGG FT KLEVPVKQKVVWAVISGAIAMVMLWIGGTQSIESLQSITIIAAMPFTIILLLGSVSLLK FT GLLTEVDKPKVATKRVN" FT misc_feature order(1392140..1392208,1392266..1392334,1392395..1392463, FT 1392539..1392607,1392698..1392766,1392803..1392862, FT 1392896..1392964,1393046..1393114,1393151..1393219, FT 1393313..1393381,1393451..1393519,1393529..1393597) FT /locus_tag="VSAL_I1282" FT misc_feature 1392146..1393615 FT /locus_tag="VSAL_I1282" FT /note="HMMPfam hit to PF02028, BCCT family FT transporter,score 5.8e-153" FT /inference="protein motif:HMMPfam:PF02028" FT misc_feature 1393055..1393084 FT /locus_tag="VSAL_I1282" FT /note="PS01303 BCCT family of transporters signature." FT /inference="protein motif:ProSite:PS01303" FT CDS 1393885..1394196 FT /transl_table=11 FT /locus_tag="VSAL_I1283" FT /old_locus_tag="TVS1184" FT /product="hypothetical protein" FT /db_xref="GOA:B6EK18" FT /db_xref="InterPro:IPR018669" FT /db_xref="UniProtKB/TrEMBL:B6EK18" FT /protein_id="CAQ78968.1" FT /translation="MRVISKPILIEFYSNPLYKDSEEALKAWHDEVIQADWNTPHEIKA FT QYTNASIVGNKRVVFNICGNKYRLIVSVSYRLKAFYVKFVGTHKQYDNVDAETIDLFK" FT CDS 1394217..1394594 FT /transl_table=11 FT /locus_tag="VSAL_I1284" FT /old_locus_tag="TVS1185" FT /product="hypothetical protein" FT /db_xref="GOA:B6EK19" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:B6EK19" FT /protein_id="CAQ78969.1" FT /translation="MNIKPIRTKDDYKAAMARISELTSGDPDALPDIEFDELEILTTLV FT EAYENVHYKIEAPDPVEAIKFRMEQLGLSDSDLTPILGQRSRVTEILKRKRRLSLTMIR FT SLNSKLNIPLESLIGEYQLAK" FT CDS 1395025..1396188 FT /transl_table=11 FT /locus_tag="VSAL_I1285" FT /old_locus_tag="TVS1186" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EK20" FT /protein_id="CAQ78970.1" FT /translation="MRVVYIIACFIVGILGVLFGGIILGYTLDSLLAGNLQIGDAATWL FT AAISTLGAAIGTIGSLIMLNRQHNQNVIHQKRVWKKQEESLDFARYREHKVQFEQLLDT FT LEDKHSDFYVFKDRTKLYLNLFPNNSPRNELATFKYKLTRADLMKQHPLDAAWKNIDKV FT DRILRTHGQGRLIIDENGERLEKFPNPLPIHQIEHSIFNTAGSLGLRCNRIPQTGDLVN FT TDEVFASVFDTMLMRSHSADIFESLNEFCGLESPRERGVIYSPIDLGFQLLNYYKREDT FT PEYNSIISGHYRIVTILFELDRLVKLLPQEHPLVLFVRNLYGAPWDKTLLKDIDDKGRV FT KHYMNQVFIQLGDILEGEQKASEAVKQQAQYIFRYIQDQASYENSPF" FT sig_peptide 1395025..1395099 FT /locus_tag="VSAL_I1285" FT misc_feature order(1395037..1395105,1395148..1395216) FT /locus_tag="VSAL_I1285" FT CDS complement(1396332..1397294) FT /transl_table=11 FT /locus_tag="VSAL_I1286" FT /old_locus_tag="TVS1187" FT /product="hypothetical protein" FT /db_xref="GOA:B6EK21" FT /db_xref="InterPro:IPR004119" FT /db_xref="InterPro:IPR011009" FT /db_xref="UniProtKB/TrEMBL:B6EK21" FT /protein_id="CAQ78971.1" FT /translation="MFDLSRISGFENASIRQTDTLQILWGGYGELVRLHLTQAPTSSII FT IKQMTLPKPKVHPRGWNTDLSHQRKLNSYQVELNWYQTYANSVSTHCPVPRCLYVEQRD FT NELILVLEDLATCGFPIVKTNASINEAKACLTWLANFHAEHMNVEPIGLWQTGTYWHLD FT TRPDEFEALTDLPLKQAAVKIDETLKNTRYQTLVHGDAKLANFCFSEGGNQVAAVDFQY FT VGKGCGMKDVILFISSAVMPEQCAELENELLDNYFSQLKASLLRLGRTEASDDIEQEWR FT PLFSVAWADFQRFVKGWSPEHWKINGYTEGLKERALKGL" FT CDS complement(1397327..1397785) FT /transl_table=11 FT /locus_tag="VSAL_I1287" FT /old_locus_tag="TVS1188" FT /product="putative RNA methyltransferase" FT /db_xref="GOA:B6EK22" FT /db_xref="InterPro:IPR001537" FT /db_xref="UniProtKB/TrEMBL:B6EK22" FT /protein_id="CAQ78972.1" FT /translation="MTKGYSCIGLVNPKTPENVGSVMRAAGCYGVNSVFYTGRRYDIAK FT KFCTDTKSQHLNVPLIGVEDLKDIIPLDCVPVAVDLIEGAKPLPDYKHPPRAFYIFGPE FT DGTLKKEITDFCRETIYVPTNGCMNLAAAVNVIMYDRMAKGENFSNHK" FT misc_feature complement(1397369..1397773) FT /locus_tag="VSAL_I1287" FT /note="HMMPfam hit to PF00588, SpoU rRNA Methylase FT family,score 1.3e-15" FT /inference="protein motif:HMMPfam:PF00588" FT CDS 1397881..1398354 FT /transl_table=11 FT /locus_tag="VSAL_I1288" FT /old_locus_tag="TVS1189" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR021139" FT /db_xref="UniProtKB/TrEMBL:B6EK23" FT /protein_id="CAQ78973.1" FT /translation="MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTDGRKVVGANA FT YAIARSDDKQKQFHNILRGIGFDVKLKPFIQRRDGSAKGDWDVGIALDAIELAEQADIV FT VILSGDGDFELLVQRIQSRFNKEVEVYGVADLTANALIDAADRFIPIEGNLLL" FT misc_feature 1397881..1398348 FT /locus_tag="VSAL_I1288" FT /note="HMMPfam hit to PF01936, Protein of unknown function FT DUF88, score 1.4e-72" FT /inference="protein motif:HMMPfam:PF01936" FT CDS 1398517..1399893 FT /transl_table=11 FT /locus_tag="VSAL_I1289" FT /old_locus_tag="TVS1190" FT /product="alkaline-resistant alpha-amylase precursor" FT /db_xref="GOA:B6EK24" FT /db_xref="InterPro:IPR006046" FT /db_xref="InterPro:IPR006047" FT /db_xref="InterPro:IPR013780" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR015902" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:B6EK24" FT /protein_id="CAQ78974.1" FT /translation="MSQGMAGQLHNIPAVSNVILHAFDWTYQSIAEQAEQIAALGYRSV FT LVSPAMKSLQLPSGTQWWQRYQPQDYRLIDNPLGNTSDFKHMIERLAEFNLWVYVDVVF FT NHMANESDIRADLQYPNRWDREDYEKDPIKYHALTLFGDLSEPLFTEPDFVDAFGIENW FT NDKWEVQNGRISGGPHDPGLPTLIDNEHVVEQQRAYLLALKSMGVKGFRIDAAKHMSLE FT HLNKVWTDDITNDVHIFGEIITDGGATKEEYETFLSPYLMGTTLGAYDFPLFNILYQAF FT EKKGSLTSLIDPYCYGLALSPLRAITFAITHDIPNNQVFKSLVMSEHNEWLAYAYLFGR FT EGGIPLVYSDLDTSGITNSFGSPRWKNAWKEEKMSGLIHFHHRMYGEGQTLIEASDDHL FT VFARGDQGIVALNKSNKNIEVSMSSDSEWREFSSNQLCQKKEGVLVFSIPKYSYLLLCH FT " FT misc_feature 1398565..1399659 FT /locus_tag="VSAL_I1289" FT /note="HMMPfam hit to PF00128, Alpha amylase, catalytic FT domain, score 2e-39" FT /inference="protein motif:HMMPfam:PF00128" FT CDS complement(join(1400000..1400413,1402779..1403384)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1290" FT /old_locus_tag="TVS1191" FT /product="outer membrane protein, OmpA family (pseudogene)" FT /note="Similar to Vibrio cholerae putative outer membrane FT porin OmpA UniProt:O31154 (321 aa) fasta scores: FT E()=8.9e-17, 36.765% id in 340 aa. CDS is disrupted by the FT insertion of an IS element after codon 202" FT /db_xref="PSEUDO:CAQ78975.1" FT /inference="similar to sequence:UniProt:O31154" FT misc_feature complement(1400036..1400323) FT /locus_tag="VSAL_I1290" FT /note="HMMPfam hit to PF00691, OmpA family, score 5.5e-36" FT /inference="protein motif:HMMPfam:PF00691" FT repeat_region 1400415..1402729 FT /note="VSa2" FT repeat_region 1400415..1400438 FT /note="IR of VSa2" FT CDS 1400496..1400810 FT /transl_table=11 FT /locus_tag="VSAL_I1291" FT /old_locus_tag="TVS1192" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78976.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 1400807..1401154 FT /transl_table=11 FT /locus_tag="VSAL_I1292" FT /old_locus_tag="TVSb0017" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ78977.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 1401226..1402713 FT /transl_table=11 FT /locus_tag="VSAL_I1293" FT /old_locus_tag="TVS1194" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EK28" FT /protein_id="CAQ78978.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEACDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 1402706..1402729 FT /note="IR of VSa2" FT misc_feature complement(1402836..1403375) FT /locus_tag="VSAL_I1290" FT /note="HMMPfam hit to PF01389, OmpA-like transmembrane FT domain, score 1.4e-12" FT /inference="protein motif:HMMPfam:PF01389" FT misc_feature complement(1403304..1403372) FT /locus_tag="VSAL_I1290" FT sig_peptide complement(1403316..1403384) FT /locus_tag="VSAL_I1290" FT CDS complement(1403518..1405509) FT /transl_table=11 FT /locus_tag="VSAL_I1294" FT /old_locus_tag="TVS1196" FT /product="methyl-accepting chemotaxis protein" FT /db_xref="GOA:B6EK29" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR004089" FT /db_xref="InterPro:IPR004090" FT /db_xref="UniProtKB/TrEMBL:B6EK29" FT /protein_id="CAQ78979.1" FT /translation="MNSSVVRRMYAGFSLIVILFITTVIIMLNGTSNIHKQMQSVSTES FT MPLVSLSNETSVALLAADKSFKDFLTTRDPVQMQQARQQFSVAETTFKNTFQRLTAAAQ FT RNSTTAQQSAELASIESQYFTEALVAMDNYQDLLVAEDSKQKATRNFQRLYTELSVRMK FT EYIDGQESIAVKMMAKSYFVKLEDAELITSDALASNDVEFVKKAVNKNKKAVTHLNYAY FT RGLNNQLPELKPIFDDSVNKFSLEVGKKEGILNTHFIYLNAKETLYTNISNLAHQIDAG FT LTLLNSFNKSANQGLQNSLEQADVIYQQSFYKAVVLGVVVSLLATAIGFHLASSVRTPL FT NNMLRILESLTSGDMTQRIATKHNSEFSRVSRHINTLADNLQKVLLQLSAASDELTTVA FT QNNSSTAEKAKQQLLEQREKTTSVAAAMTEMEHSVVEVASSSESSLLKVQEVEAASEHG FT QQVMTNNIATIEQLSSRLDESVHAVANLQKVSSEIGSILDVINKIAAQTNLLALNAAIE FT AARAGEQGRGFAVVADEVRVLAKRTAESTSEIETMIGNLQSSSKTTTLVIESCVEDMQQ FT SVTQTNEANNAMVMIQNLIEEISHMSNHISQAANEQSATTTEIARSLEDISHIAEENQT FT AMNDIANVSSTLNELAHQQSDIVHQFKV" FT misc_feature complement(1403524..1404270) FT /locus_tag="VSAL_I1294" FT /note="HMMPfam hit to PF00015, Methyl-accepting chemotaxis FT protein (MCP) s, score 1.4e-57" FT /inference="protein motif:HMMPfam:PF00015" FT misc_feature complement(1404361..1404570) FT /locus_tag="VSAL_I1294" FT /note="HMMPfam hit to PF00672, HAMP domain, score 2.9e-10" FT /inference="protein motif:HMMPfam:PF00672" FT misc_feature complement(order(1404502..1404570,1405414..1405482)) FT /locus_tag="VSAL_I1294" FT CDS 1405807..1406157 FT /transl_table=11 FT /locus_tag="VSAL_I1295" FT /old_locus_tag="TVS1197" FT /product="HIT family protein" FT /db_xref="GOA:B6EK30" FT /db_xref="InterPro:IPR001310" FT /db_xref="InterPro:IPR011146" FT /db_xref="InterPro:IPR011151" FT /db_xref="InterPro:IPR019808" FT /db_xref="UniProtKB/TrEMBL:B6EK30" FT /protein_id="CAQ78980.1" FT /translation="MAEETIFSKIIRKEIPADVVYQDDLVTAFRDINPRAPSHVLIIPN FT KLIPTTNDLEQEDELVMGRLFTVAKKIAQEEGIAKEGYRLIVNCNPHGGQEVYHIHMHL FT VGGRPLGPMLLS" FT misc_feature 1405819..1406136 FT /locus_tag="VSAL_I1295" FT /note="HMMPfam hit to PF01230, HIT domain, score 6.2e-52" FT /inference="protein motif:HMMPfam:PF01230" FT misc_feature 1406068..1406124 FT /locus_tag="VSAL_I1295" FT /note="PS00892 HIT family signature." FT /inference="protein motif:ProSite:PS00892" FT CDS 1406225..1407622 FT /transl_table=11 FT /locus_tag="VSAL_I1296" FT /old_locus_tag="TVS1198" FT /product="putative lipoprotein" FT /db_xref="GOA:B6EK31" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:B6EK31" FT /protein_id="CAQ78981.1" FT /translation="MKSVLKKSVILSFTLILSGCANLSVGNLFSHYSAQTQDTYELVKN FT GEAKLAYQDAAEDTGGPILDNLELGRIALLSEQYAESKSDFEIAEQAARVQSDEATITV FT SGSANQVGSLVTNDNLIDYKPADYELGYLHLYLSLNYLKNNDLEGALVEVRKANYIQEQ FT ARKDREKELKSAEKEAKKKGVNANVGAILANYPDAGKTLKAVQNGYLFYYSGLLFETNR FT NFSDAYIDYKRALAVAPNNKTVIESVQRLARRLGMKNDIQTLEKQYGAYKVPNRTDSRV FT IIIDEQGILPQLDDWRLRLPMWDSHGNFVQYNLSLPYYKKMQRQTFPPLRVNDKALPSD FT QLADVTLMAENDLSERIPAMVIRQALRVVAKDELRKTSRNTKEEELANALFTIFNSLTE FT QPDTRSWQTLPAIISVTNMSVEAGNNTLEYQGNELNFSVKEGHTVVVWVSRQGNAVTWW FT HKQLGEI" FT sig_peptide 1406225..1406302 FT /locus_tag="VSAL_I1296" FT misc_feature 1406252..1406284 FT /locus_tag="VSAL_I1296" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 1406846..1406947 FT /locus_tag="VSAL_I1296" FT /note="HMMPfam hit to PF07719, Tetratricopeptide FT repeat,score 0.0066" FT /inference="protein motif:HMMPfam:PF07719" FT CDS 1407622..1408011 FT /transl_table=11 FT /locus_tag="VSAL_I1297" FT /old_locus_tag="TVS1199" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR010824" FT /db_xref="UniProtKB/TrEMBL:B6EK32" FT /protein_id="CAQ78982.1" FT /translation="MKKWFIALLLPLVLAACSSGQTSGISVDSSTQKVVFGDNVLGGRL FT SVDQISTQDNNGLVRGIVSLTSKFSGDQQLQYRFYWYDDQGLEVNGSDSPWRTFIVRGL FT DTMSVQGVAMKPEATQFRIQIRTLE" FT sig_peptide 1407622..1407693 FT /locus_tag="VSAL_I1297" FT misc_feature 1407628..1408002 FT /locus_tag="VSAL_I1297" FT /note="HMMPfam hit to PF07233, Protein of unknown function FT (DUF1425), score 2.4e-49" FT /inference="protein motif:HMMPfam:PF07233" FT misc_feature 1407640..1407672 FT /locus_tag="VSAL_I1297" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1408058..1408648 FT /transl_table=11 FT /locus_tag="VSAL_I1298" FT /old_locus_tag="TVS1200" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR005534" FT /db_xref="InterPro:IPR014094" FT /db_xref="UniProtKB/TrEMBL:B6EK33" FT /protein_id="CAQ78983.1" FT /translation="MKKSVVALLGLAVLLGGCSNKVSYGDAQAVETTTVDFGSTDLQKI FT AGEMTESMLSSGSVAQITQGNRPIVFVESIKNKTSEHIDTESVTDSISTKLLNSGKFRF FT VDMDRVEAVRTQLNFQNTDELVNQNTAIQFGKMVGAQYMLYGNLSSIVKNAGSDKDVYY FT KMTMRLMDLETGLIEWADETEIRKQQEKSLLGW" FT sig_peptide 1408058..1408144 FT /locus_tag="VSAL_I1298" FT misc_feature 1408079..1408111 FT /locus_tag="VSAL_I1298" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1408863..1412438 FT /transl_table=11 FT /locus_tag="VSAL_I1299" FT /old_locus_tag="TVS1201" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EK34" FT /protein_id="CAQ78984.1" FT /translation="MSHNYPFQPKNSMCWNTEEFSYEEAAQAFDKDGNLLSLKTMSTAP FT ADDTNGLPNEKSMYWTGETNKTDVVSNEPEVVDFTSKEEASNADAHFVPVRYAIDQQRN FT SDGSITPFGLPEGWNGNGLAARRLTSNQYTLRQLRDGWLYVYNYEQKTIDEYQVEGTQF FT THFKLSDSEDPSNKERGQKQASTGFLSYPNNSVLSLLYSKHRWSWIMFQDVLENIGRYS FT SYMQTVVLSRDGCPAHVGDIELLSKVADIEESAVDDGRFSASYVGTSDSQDGEHGHSEI FT KPVAFVSDFIPEIPEEEVAYVVAVNDHLVDCRDLATQFVGAATPYRFFDENFSNQWTLM FT QTAMQMTLFGSMDDIKFPPSVTRNNKELEFYLDMSRFYDAGEKTSNAYKSQSPSSDAIA FT RVYKGEQSEIAKSIQSKYSIPASHLNKYENWLAQSKWRKQLDWEAMLTEMDELQKERDE FT LEKEAFEAKKDFKHFLNAFTPFMIERQCDLWGEETQTELQDANLHFIEAFTFLASVEDK FT DWLTAQCEKPTSIIPLYTAGFSHTLFKKLEELLPKHDDNDGANKSNHESIIEDVDTPQT FT IQDGFYIEVAGLSNTTMMYSKIVDFMAHASVSETEIFKKLGETIQQLNHVLIAASGGLI FT QYIAKLGVSPIAQASVLLLPAMPTGYASRTTSLYRITFAEKLAHKIGINVAEGFAQNFD FT KWQKRMAQVDVDIKTSTTIVENKSISVKQKQAALKEMTRLQKVKAANVVGFPQRFEWPS FT DIKGAIHSMSEERLKGVAVSAKNHFADVGGLGFLVLVFNLISLNDSLRTIRQDGLATAD FT NYAEIGQKIAYTASAWAGIRTGTAWAKIQGNPELLKSTVSAIEKARLEGVDDWLTKLPL FT KDIKIFTRWLGVTAVLGTIASVTELLREADKLEDMYGIEKTMQYGKVYSLGGLSTIGAF FT QAIGAISGRFAIGVMFGPGVMAALLVLTIFYIAFGYQLDKFKQDEYQKWLALLPWGTNP FT KRVKWSESKDVSLRLEENTNILNTALNDLKRIQLQPVIYQEPQLTYVKSEQSYPAAVAL FT CHAIDVRFSVPRGMGSQSLRITTNSNASMEELESGEWLSNVDLVTLEKIQIDNKKPILS FT EQRDVYQVTLPISSEMNYLAVQIDYLMLSQNSEEEIQYSYQFQYAVTQKAVYTAISDSE FT KLNKWGTQSLNKSADIVIDHTKLED" FT misc_feature order(1411488..1411556,1411614..1411673,1411686..1411754) FT /locus_tag="VSAL_I1299" FT CDS 1412441..1413328 FT /transl_table=11 FT /locus_tag="VSAL_I1300" FT /old_locus_tag="TVS1202" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EK35" FT /protein_id="CAQ78985.1" FT /translation="MSYLPFYITPEEFEQECFKNKEKIEHSVGSMQWIAKNIEHKNRYD FT RKLFWLGCVAFSILLIAFVTGFDIEVWTLENELGYGFIPILIIINYIYYFVFALDDSYE FT YSFSSEGFSYSKQLDQPKIINSIAQKVAYVACAFCVFAVIFIGPMALAGAGGSLLLAFG FT MTKKQTVYVDHRFSSTEQFLYAQFNRKRNVMALYHRFDICYYCDTTHTMISRNQTRSRS FT YVFFNSDDDMAKVLDLLKQNTNIKIEEITDIKGFFDFDYYPKFVLDIDVIGEQYSVDEA FT TSRRGEPAPVMSDS" FT misc_feature order(1412582..1412641,1412669..1412737,1412834..1412902) FT /locus_tag="VSAL_I1300" FT CDS 1413481..1413819 FT /transl_table=11 FT /locus_tag="VSAL_I1301" FT /old_locus_tag="TVS1203" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR007416" FT /db_xref="UniProtKB/TrEMBL:B6EK36" FT /protein_id="CAQ78986.1" FT /translation="MKVKKLENKNRRIRKKLYLGEFAILGFELSCKTEFKDFDQYDVFV FT DEFIDYINSIDLCFCGGGLELFEGFVCSTERYDSATAEQQLLVANWLDSRPEVSKVEIS FT ELVDTNYL" FT misc_feature 1413499..1413813 FT /locus_tag="VSAL_I1301" FT /note="HMMPfam hit to PF04320, Protein with unknown FT function (DUF469), score 2.5e-15" FT /inference="protein motif:HMMPfam:PF04320" FT CDS complement(1413903..1414646) FT /transl_table=11 FT /locus_tag="VSAL_I1302" FT /old_locus_tag="TVS1204" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:B6EK37" FT /protein_id="CAQ78987.1" FT /translation="MSSNALYTDLSGYYDLMCADIDYHEQSNYVRRIHQIFGNQGRNYL FT DLACGTGPHVKHFINYGYQAKGLDINQPMLDLAKLRNPDAEFILHDMSNFTVDKPLDLI FT TCFLYSIHYNANIEKLAECIESVHAALKTDGVFCFNSVARNKIDNRSFVKHPAEHEGSQ FT FTFQSGWNYSGQGDGQHLLLKIEKTTDGVTEIWDDKHPMVAVDFEQLQALLEPYFEVHL FT FEHDYEKITPLETSSGNSIVVCIKK" FT misc_feature complement(1414230..1414514) FT /locus_tag="VSAL_I1302" FT /note="HMMPfam hit to PF08241, Methyltransferase FT domain,score 4.8e-10" FT /inference="protein motif:HMMPfam:PF08241" FT misc_feature complement(1414236..1414514) FT /locus_tag="VSAL_I1302" FT /note="HMMPfam hit to PF08242, Methyltransferase FT domain,score 2.9e-09" FT /inference="protein motif:HMMPfam:PF08242" FT CDS complement(1414909..1415691) FT /transl_table=11 FT /locus_tag="VSAL_I1303" FT /old_locus_tag="TVS1205" FT /product="membrane protein" FT /db_xref="GOA:B6EK38" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:B6EK38" FT /protein_id="CAQ78988.1" FT /translation="MEWISNDITLWILIALMLSAFAAGFIDSVAGGGGLILVPSFILAG FT LPPQVALGQEKIVSTLGTIAAIRNFIRNKKVVWAAVTTGIPAGLLGAYIGAEAILYFDP FT DTIGKIIMGMLPIGIVLSFIPKKAKEVNQSDINPKIILFGVPTAVFVIGFYDGFFGPGT FT GSFLILALHYLLRFDLVSASATSKLFNFASNIGALIAFTLSGHVLYLLAIPLVIMNLLG FT NHIGSSSALKYGPNLVKRTLTLSLTLLMGSLAYKFIVL" FT misc_feature complement(order(1414915..1414983,1415041..1415109, FT 1415167..1415220,1415230..1415286,1415320..1415376, FT 1415404..1415472,1415533..1415601,1415614..1415673)) FT /locus_tag="VSAL_I1303" FT misc_feature complement(1414930..1415652) FT /locus_tag="VSAL_I1303" FT /note="HMMPfam hit to PF01925, Domain of unknown function FT DUF81, score 4.3e-27" FT /inference="protein motif:HMMPfam:PF01925" FT sig_peptide complement(1415626..1415691) FT /locus_tag="VSAL_I1303" FT CDS complement(1415702..1416598) FT /transl_table=11 FT /locus_tag="VSAL_I1304" FT /old_locus_tag="TVS1206" FT /product="6-phosphogluconate dehydrogenase" FT /EC_number="1.1.1.31" FT /db_xref="GOA:B6EK39" FT /db_xref="InterPro:IPR002204" FT /db_xref="InterPro:IPR006115" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR015815" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EK39" FT /protein_id="CAQ78989.1" FT /translation="MEAQKVAFIGLGVMGYPMAGHLQHSGLETTVYNRSLDKALQWCTE FT YQGFLASSPAEAAKNCDIVFICVGNDDDVRSVVYGPEGVLEGMKENAILVDHTTVSADL FT AIELAQQCKQKKINFIDAPVSGGQAGAENGTLTIMCGGAKETFDQIVTTIDCYAKQATL FT LGDNGQGQRCKMVNQICIAGVLKGLSEALLLAEKSNLDIEQVVNVLKHGAAGSWQMENR FT AVTMAERKFDFGFAIDWMRKDLSICLNEAKQHNLSLPMTQEIDRSYAILQDLNLGRMDT FT SILIKSYDQPITNELAI" FT misc_feature complement(1416101..1416592) FT /locus_tag="VSAL_I1304" FT /note="HMMPfam hit to PF03446, NAD binding domain of FT 6-phosphoglucona, score 1.9e-70" FT /inference="protein motif:HMMPfam:PF03446" FT misc_feature complement(1416113..1416589) FT /locus_tag="VSAL_I1304" FT /note="HMMPfam hit to PF03721, UDP-glucose/GDP-mannose FT dehydrogenase, score 0.0014" FT /inference="protein motif:HMMPfam:PF03721" FT misc_feature complement(1416542..1416577) FT /locus_tag="VSAL_I1304" FT /note="PS00895 3-hydroxyisobutyrate dehydrogenase FT signature." FT /inference="protein motif:ProSite:PS00895" FT CDS complement(1416608..1417630) FT /transl_table=11 FT /locus_tag="VSAL_I1305" FT /old_locus_tag="TVS1207" FT /product="hypothetical protein" FT /db_xref="GOA:B6EK40" FT /db_xref="InterPro:IPR003819" FT /db_xref="InterPro:IPR014503" FT /db_xref="UniProtKB/TrEMBL:B6EK40" FT /protein_id="CAQ78990.1" FT /translation="MFNLKKESSQELLKIIEIHIPYDSARKLSSAFSHLRLGDDKSWLR FT TSHWFGTTIKHCLIKELNYKISNFKENKDQQALIIRGLPIDQNLCKTPYNGYVSPSKLP FT IISAINIGIYQLAKIEPTSYQSENDGLLFRHVVPSLKGRNDKSSHGSKHTFGHHVDNPD FT LPLTNEKITDKSGCPEFLSLMSLRSDLKVKSNFILVDDVLNQLSNGVIEQLSKPHFEIS FT RPDSFKQSVKTILPLISFDNDGVAYCRYDKENTTPLTTEAAAALVMWEAQLKNTELNNA FT ITYQPGDFLIIKNQRLMHSREGFSPRDDGTDRWLIRLFGMSSLERIIPINEENKHIAQD FT " FT CDS 1417791..1419131 FT /transl_table=11 FT /locus_tag="VSAL_I1306" FT /old_locus_tag="TVS1208" FT /product="putative HTH-type trancriptional regulator, GntR FT family" FT /db_xref="GOA:B6EK41" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EK41" FT /protein_id="CAQ78991.1" FT /translation="MSENKFKQIAETIESRIIDGIYPPNFKLPPHRELANELSTTPATI FT AKAYKLLADKKRVEPFVGRGTFVCGESRLDQVIQSSEDNGDYNFSILQPCLSHNVQPLK FT EALEKAASQLTSDLIGYTEHSGHETHRLAGVNWAKEYGLVGGNANNTLLTNGAQHALSL FT LIEVLTKPGDTIAIEALVYPGIIAIASLLGRQIVGVALDDKGMSPTDLTRVIKQHKPKL FT VIVIPSFQNPTGITMPTARRKEIADVIIKNNIYLIEDDIYGFLNEKVIPAICNWLPEQG FT FHITSLSKAISPAIRCGFVKVPDIHISNVGAQIRASIWLSSPINYIAASDMIETGVAYQ FT LANYQREIALRRQEMVYEVFGNSYLKTDGYHVWLPLMAHWQQDQFVLEAKNRGLIVSSG FT GYFNATDTHLNHVRLSLMSINSDEKFKKGLKALFELLNSNNKTMFPF" FT misc_feature 1417803..1417994 FT /locus_tag="VSAL_I1306" FT /note="HMMPfam hit to PF00392, Bacterial regulatory FT proteins, gntR fam, score 1.9e-13" FT /inference="protein motif:HMMPfam:PF00392" FT misc_feature 1417875..1417940 FT /locus_tag="VSAL_I1306" FT /note="Predicted helix-turn-helix motif with score FT 1124.000, SD 3.02 at aa 29-50, sequence FT PPHRELANELSTTPATIAKAYK" FT misc_feature 1418040..1419086 FT /locus_tag="VSAL_I1306" FT /note="HMMPfam hit to PF00155, Aminotransferase class I and FT II, score 1.3e-07" FT /inference="protein motif:HMMPfam:PF00155" FT CDS 1419148..1419978 FT /transl_table=11 FT /locus_tag="VSAL_I1307" FT /old_locus_tag="TVS1209" FT /product="putative antibiotic resistance protein" FT /db_xref="GOA:B6EK42" FT /db_xref="InterPro:IPR002575" FT /db_xref="InterPro:IPR011009" FT /db_xref="UniProtKB/TrEMBL:B6EK42" FT /protein_id="CAQ78992.1" FT /translation="MSLNTLKLDLIHVEPLTGGLTNACLKVEAKEGTFVWRPVSEQAKL FT LGADRYKERDILTALHAVPSTPRVHDSNEHGLLVEWFDGEVIALDKAQGVAIELLVSVH FT QLIIDDFTDDIKNDVMSLKSRILDYWSSLETENKTSEMQTYVDYFSTKEEQALFTPCLC FT HYDIGAYNIIVKEEGYGLIDWEYASIGDPSQDLTTMIIANQFDADEVISDYCQQRNVDI FT EPWQKAVTYWTPWVCFMGALWFTLGHQLLKDHCYQELAEREMNKLKKFLPLIEK" FT misc_feature 1419181..1419840 FT /locus_tag="VSAL_I1307" FT /note="HMMPfam hit to PF01636, Phosphotransferase enzyme FT family, score 8.7e-18" FT /inference="protein motif:HMMPfam:PF01636" FT repeat_region complement(1419984..1421096) FT /note="VSa8" FT repeat_region complement(1419984..1420012) FT /note="IR of VSa8" FT CDS complement(1419991..1420344) FT /transl_table=11 FT /locus_tag="VSAL_I1308" FT /old_locus_tag="TVS1210" FT /product="transposase" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:B6EK43" FT /protein_id="CAQ78993.1" FT /translation="MSFQTTEGRVTTDTVIDAFEHFINARKNDKPCFIILDNASFHRSA FT KFKQKLHEWLMNDVLVCYLPPYSPELNIIEILWKKVKYEWLPCEAFKTFEDLSINIKNI FT LNYYGEKFTITFA" FT CDS complement(1420574..1420996) FT /transl_table=11 FT /locus_tag="VSAL_I1309" FT /old_locus_tag="TVS1212" FT /product="transposase" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:B6EGL6" FT /protein_id="CAQ78994.1" FT /translation="MKAVNPLTDNEKITLKEAIANHPKNRVRIRAHAIILSDKGYSILA FT LTDILDAKFETISSWIDHWEACGMLGLYDAVRIGRKPIYTEAEVYRLKSLVDEEPHQLK FT RAQAILEEETGKKSSLDTIKRNIKKVITVTKEPDTH" FT repeat_region complement(1421068..1421096) FT /note="IR of VSa8" FT CDS 1421218..1421769 FT /transl_table=11 FT /locus_tag="VSAL_I1310" FT /old_locus_tag="TVS1213" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR008886" FT /db_xref="InterPro:IPR022987" FT /db_xref="UniProtKB/TrEMBL:B6EK45" FT /protein_id="CAQ78995.1" FT /translation="MIIYLHGFDSTSPGNHEKVMQLQFIDEDVRFINYSTLHPKHDMQH FT LLKEVSKVIEQAGDPNPIICGVGLGGFWAERIGFLCGIRQVMFNPNLHPEVNMEGRIDR FT PEEYADIATKCIEKFRQKNKEHCLCILSRSDEIRDNAETAAELEPYYQVIWDESEGHKF FT KKISQHLQAMKVFKDEETLI" FT misc_feature 1421218..1421751 FT /locus_tag="VSAL_I1310" FT /note="HMMPfam hit to PF05728, Uncharacterised protein FT family (UPF0227), score 4.4e-94" FT /inference="protein motif:HMMPfam:PF05728" FT CDS 1422124..1423413 FT /transl_table=11 FT /gene="ndh" FT /locus_tag="VSAL_I1311" FT /old_locus_tag="TVS1215" FT /product="NADH dehydrogenase" FT /EC_number="1.6.99.3" FT /db_xref="GOA:B6EK46" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:B6EK46" FT /protein_id="CAQ78996.1" FT /translation="MTKIVIVGGGAGGLELATKFGRTLGRKGRAEVTLVDRKTSHLWKP FT LLHEVATGSLDEGVDAISYRAHAKNHSFDFQMGSLCDIDREKKQIKLAVIKDEHGEVIV FT PVRHIDYDFLILAIGSTSNDFNTPGVRDNCIFLDSPEQANRFRTEMNNQFLKLHSHPTQ FT KTVDIAIVGAGATGVELSAELHNAVKELRSYGFGDLDSSKLNVSLVEAGERILPALPPR FT ISASAHSELTKLGVNVRTATMVTKADSEGLHTKDGDVIPAQIMVWAAGIKAPDFMKDIA FT GLETNRINQLVVKPTLQTTRDDCIFVIGDLASCQQADGSFVPPRAQSAHQMASHAFKNI FT VAKMTDREMKPYVYKDHGSLVSLSNFSTVGSLMGNLTKGSMMIEGRIARIVYISLYRMH FT QVALHGVFKTALIVLVGRINRVLRPNLKLH" FT misc_feature 1422130..1423071 FT /gene="ndh" FT /locus_tag="VSAL_I1311" FT /note="HMMPfam hit to PF07992, Pyridine FT nucleotide-disulphide oxidoreduc, score 8.3e-20" FT /inference="protein motif:HMMPfam:PF07992" FT misc_feature 1422130..1422480 FT /gene="ndh" FT /locus_tag="VSAL_I1311" FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidoreduc, score 0.0046" FT /inference="protein motif:HMMPfam:PF00070" FT misc_feature 1422622..1422933 FT /gene="ndh" FT /locus_tag="VSAL_I1311" FT /note="HMMPfam hit to PF00070, Pyridine FT nucleotide-disulphide oxidoreduc, score 1.1e-17" FT /inference="protein motif:HMMPfam:PF00070" FT CDS 1423587..1424891 FT /transl_table=11 FT /locus_tag="VSAL_I1312" FT /old_locus_tag="TVS1216" FT /product="putative helicase (DEAD/DEAH box helicase)" FT /db_xref="GOA:B6EKB3" FT /db_xref="InterPro:IPR000629" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014014" FT /db_xref="UniProtKB/TrEMBL:B6EKB3" FT /protein_id="CAQ78997.1" FT /translation="MSFSSQGLAPEVVKALTECGYQKLTPIQQKAIPLARKGHDILANA FT QTGTGKTAAFALPVIQRLLDTKKSATRRSARALILAPTRELAEQIAVNIISYTKYTSLK FT VTAVFGGKKMSSQERALDPGVDILVATPGRLQEHIEEGNVSIANLEFLVFDEADRMLDM FT GFVNAIRNIMMEVNSAPQIMLFSATSSAQMNKLASDILRKPKRISVDRENMTATTISHV FT VYPVDEERKTELLSELIGRKNWQQVLVFVNYKETANNIVKELKLDGIKAVICHGDKAQS FT ARRRALEEFKEGKARVMVATDVAARGLDIADLPHVINYDMPFLAEDYVHRIGRTGRAGK FT KGHAISFVSREEELTVVQVETLIQQRIHRVEQPGYEPKSRESYIEKVNTKAGFKDRKGR FT TNNATNANQDQSSAERRMRLKNAIQKKAGITKLKK" FT misc_feature 1423659..1424174 FT /locus_tag="VSAL_I1312" FT /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score FT 2.6e-62" FT /inference="protein motif:HMMPfam:PF00270" FT misc_feature 1423719..1423741 FT /locus_tag="VSAL_I1312" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT misc_feature 1424043..1424069 FT /locus_tag="VSAL_I1312" FT /note="PS00039 DEAD-box subfamily ATP-dependent helicases FT signature." FT /inference="protein motif:ProSite:PS00039" FT misc_feature 1424373..1424603 FT /locus_tag="VSAL_I1312" FT /note="HMMPfam hit to PF00271, Helicase conserved FT C-terminal domain, score 4.4e-34" FT /inference="protein motif:HMMPfam:PF00271" FT CDS 1424901..1425347 FT /transl_table=11 FT /locus_tag="VSAL_I1313" FT /old_locus_tag="TVS1217" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EKB4" FT /protein_id="CAQ78998.1" FT /translation="MERDYTFECLVTMPRHDLEEFSHRVVSRMVPEETMKEIFTFDQEE FT TVNEDRMQTAQLDAMLRLAAVALGEVTHAFSESDNSQQNSLRMMRLILWHAYAMLFNLE FT EAVTLEQHCELVETILMKPPTDALNWLPILSKLLGDYASIAAKK" FT repeat_region 1425448..1427759 FT /note="VSa2" FT repeat_region 1425448..1425471 FT /note="IR of VSa2" FT CDS 1425529..1425843 FT /transl_table=11 FT /locus_tag="VSAL_I1314" FT /old_locus_tag="TVS1218" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ78999.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS join(1425840..1425998,1425998..1426186) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1315" FT /old_locus_tag="TVSb0019" FT /product="transposase (pseudogene)" FT /note="Similar to Pseudoalteromonas haloplanktis (strain FT TAC 125) putative orphan protein putative transposase (is66 FT family element,orf2-like). UniProt:Q3IIG1 (EMBL:CR954246) FT (115 aa) fasta scores: E()=1.7e-31,57.391% id in 115 aa. FT CDS contains a frameshift after codon 53" FT /db_xref="PSEUDO:CAQ79000.1" FT /inference="similar to sequence:UniProt:Q3IIG1" FT CDS join(1426258..1427160,1427159..1427743) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1316" FT /old_locus_tag="TVSb0020" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=1.9e-115, 55.172% id in 493 aa. CDS FT contains a frameshift after codon 301" FT /db_xref="PSEUDO:CAQ79001.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT repeat_region 1427736..1427759 FT /note="IR of VSa2" FT CDS complement(join(1427841..1428233,1428237..1429307)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1317" FT /old_locus_tag="TVS1224" FT /product="carbon starvation protein (pseudogene)" FT /note="Similar to Vibrio fischeri Carbon starvation protein FT A UniProt:Q5E5Q4 (488 aa) fasta scores: E()=8.1e-158, FT 90.369% id in 488 aa. CDS contains a nonsense mutation (TAT FT or TAC to TAG) after codon 357. The sequence has been FT checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ79002.1" FT /inference="similar to sequence:UniProt:Q5E5Q4" FT misc_feature complement(order(1427895..1427963,1427982..1428050, FT 1428123..1428191,1428291..1428359,1428417..1428485, FT 1428546..1428605,1428672..1428740,1428759..1428827, FT 1428855..1428923,1429005..1429073,1429083..1429151, FT 1429227..1429295)) FT /locus_tag="VSAL_I1317" FT misc_feature complement(1428342..1429307) FT /locus_tag="VSAL_I1317" FT /note="HMMPfam hit to PF02554, Carbon starvation protein FT CstA, score 1.5e-61" FT /inference="protein motif:HMMPfam:PF02554" FT CDS complement(1429491..1430207) FT /transl_table=11 FT /locus_tag="VSAL_I1318" FT /old_locus_tag="TVS1226" FT /product="transcriptional regulator, two-component response FT regulator" FT /db_xref="GOA:B6EKB9" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR007492" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:B6EKB9" FT /protein_id="CAQ79003.1" FT /translation="MLKAIVIDDELFAREELIEQLNEIGHIEIIAECGNAIDGLKQINQ FT HKPDVVFLDIQMPKITGMDLISMLDPDTMPNVVFVTAYDEFAVKAFEDNAFDYLLKPID FT PCRLKKTVKRLLAAETKQDLSPIAQTEIELIPCSGHNRILLLPSHDIEVASIQASGVEL FT LTKTEKACTQLTLKVLEEKTPLIRCHRQFLINPHFIREIKLHDNGTSDTVTQSGHVAQV FT SRRHLKEIKERLGIQC" FT misc_feature complement(1429503..1429787) FT /locus_tag="VSAL_I1318" FT /note="HMMPfam hit to PF04397, LytTr DNA-binding FT domain,score 9.3e-20" FT /inference="protein motif:HMMPfam:PF04397" FT misc_feature complement(1429869..1430204) FT /locus_tag="VSAL_I1318" FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 2.3e-27" FT /inference="protein motif:HMMPfam:PF00072" FT CDS complement(1430200..1431882) FT /transl_table=11 FT /locus_tag="VSAL_I1319" FT /old_locus_tag="TVS1227" FT /product="membrane receptor, histidine kinase" FT /note="Probably regulates genes involved in cell wall FT metabolism and genes involved in virulence" FT /db_xref="GOA:B6EKC0" FT /db_xref="InterPro:IPR003018" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR010559" FT /db_xref="InterPro:IPR011620" FT /db_xref="UniProtKB/TrEMBL:B6EKC0" FT /protein_id="CAQ79004.1" FT /translation="MELVFSLLQQLSVYLVLAYLLSKTPLFLPITTISGRWSHRFLCYI FT IFSGFCILGTYFGLAIQDAIANTRAIGAVMGGVLGGPLVGFLVGLTGGLHRYSMGEFTD FT LACAISTTAEGLLGGLFHLYFLRKNQIDQLFRPRTVLMIAFIAELLQMAIILIVAKPFD FT QAYVLVSSIVLPMIVANSIGAAMFMSIIQDRKAIYEKYSAAFSNKALNIAQRSVGILSQ FT GFNQENSEQIAKIIYEETGVGAVSITDKEKILAFIGIGDDHHLPGTPIASDYTRKAIIQ FT SKVMYIDGDEHPYQCSINDKCKLGSALVIPLIGVNNEVIGTIKLYEPKRKLFSYINLTL FT GEGIAKLLSNQILAGRYLQQQTLLTQAELRLLQAQVNPHFLFNALNTISAVIRRDPNRA FT RELIQHLSQFFRRNLKQNFEQVTLKEELHHVQSYLEIELARFADRLTVNMDIDERLYSL FT KLPTFTLQPLVENAIKHGTSNMFEEGEITIKAYLSHHQVILEVIDNAGLYIEQENSDGL FT GTNIVDKRLKNQFGDAFGLTMSCIENQQTKATIHLPVETITHA" FT misc_feature complement(1430218..1430517) FT /locus_tag="VSAL_I1319" FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HS, score 0.00015" FT /inference="protein motif:HMMPfam:PF02518" FT misc_feature complement(1430536..1430781) FT /locus_tag="VSAL_I1319" FT /note="HMMPfam hit to PF06580, Histidine kinase, score FT 1.4e-40" FT /inference="protein motif:HMMPfam:PF06580" FT misc_feature complement(1430827..1431213) FT /locus_tag="VSAL_I1319" FT /note="HMMPfam hit to PF01590, GAF domain, score 0.00023" FT /inference="protein motif:HMMPfam:PF01590" FT misc_feature complement(order(1431319..1431387,1431406..1431465, FT 1431508..1431567,1431604..1431672,1431685..1431753, FT 1431772..1431840)) FT /locus_tag="VSAL_I1319" FT misc_feature complement(1431517..1431777) FT /locus_tag="VSAL_I1319" FT /note="HMMPfam hit to PF07694, 5TMR of 5TMR-LYT, score FT 9e-38" FT /inference="protein motif:HMMPfam:PF07694" FT CDS 1432162..1432713 FT /transl_table=11 FT /locus_tag="VSAL_I1320" FT /old_locus_tag="TVS1228" FT /product="membrane protein" FT /db_xref="GOA:B6EKC1" FT /db_xref="InterPro:IPR000791" FT /db_xref="UniProtKB/TrEMBL:B6EKC1" FT /protein_id="CAQ79005.1" FT /translation="MAFGMTTVLLNLHNAGFFPLNTAILSMGLFYGGIAQVIAGIMEYK FT KGNTFGTTAFTSYGFFWLSLVGLILMPEMGLGQATSPAFMGWYLAMWGVLTFFLFLGSF FT NYPRAKQVVFGSLTILFALLSARDFTGSVVIGHMAGYVGLFCGFSAMYFSMAQVINGEY FT GRTVLPVGEMKAKEAATVTA" FT misc_feature 1432162..1432683 FT /locus_tag="VSAL_I1320" FT /note="HMMPfam hit to PF01184, GPR1/FUN34/yaaH family,score FT 4.1e-51" FT /inference="protein motif:HMMPfam:PF01184" FT misc_feature order(1432204..1432263,1432300..1432368,1432411..1432479, FT 1432498..1432551,1432561..1432629) FT /locus_tag="VSAL_I1320" FT CDS complement(1432803..1432964) FT /transl_table=11 FT /locus_tag="VSAL_I1321" FT /old_locus_tag="TVS1229" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EKC2" FT /protein_id="CAQ79006.1" FT /translation="MAEQQTYLMAIDMLCCHLGLSKEEAKAQLGIESTNDIESKIADTQ FT EALLSLYQ" FT CDS 1433272..1434147 FT /transl_table=11 FT /locus_tag="VSAL_I1322" FT /old_locus_tag="TVS1230" FT /product="heat shock protein HtpX, membrane associated FT peptidase" FT /EC_number="3.4.24.-" FT /note="Similar to Escherichia coli Probable protease HtpX FT UniProt:P23894 (293 aa) fasta scores: E()=7.3e-70, 69.072% FT id in 291 aa" FT /db_xref="GOA:B6EKC3" FT /db_xref="InterPro:IPR001915" FT /db_xref="InterPro:IPR022919" FT /db_xref="UniProtKB/Swiss-Prot:B6EKC3" FT /inference="similar to sequence:UniProt:P23894" FT /protein_id="CAQ79007.1" FT /translation="MKRIALFLATNLAVMIVFSIVLNIVYAVTGIQQGSLSGLLVMAVL FT FGFGGSLVSLLMSKKMALRSVGGEVIEQPRNETEHWLMETVSRQAQQVGIGMPTVAIYD FT SPDMNAFATGAKRDDSLVAVSTGLLHNMTRDEAEAVLAHEVSHIANGDMITMTLMQGVV FT NTFVIFLSRMIANAVSGFTSNDEEGEGEGGSFMTYFIVSTVLEIAFGFLASFLTMWFSR FT HREFYADAGAANLVGKDKMIAALERLRMGQESQLEGSMMAFGINGKKSLTELLMSHPPL FT EKRINALRQL" FT misc_feature 1433272..1433514 FT /locus_tag="VSAL_I1322" FT /note="HMMPfam hit to PF06509, HtpX N-terminus, score FT 4.5e-54" FT /inference="protein motif:HMMPfam:PF06509" FT sig_peptide 1433272..1433352 FT /locus_tag="VSAL_I1322" FT misc_feature order(1433290..1433358,1433371..1433439,1433752..1433820, FT 1433863..1433931) FT /locus_tag="VSAL_I1322" FT misc_feature 1433515..1434144 FT /locus_tag="VSAL_I1322" FT /note="HMMPfam hit to PF01435, Peptidase family M48, score FT 3.4e-43" FT /inference="protein motif:HMMPfam:PF01435" FT CDS 1434291..1434785 FT /transl_table=11 FT /locus_tag="VSAL_I1323" FT /old_locus_tag="TVS1231" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EKC4" FT /db_xref="InterPro:IPR009921" FT /db_xref="InterPro:IPR011992" FT /db_xref="UniProtKB/TrEMBL:B6EKC4" FT /protein_id="CAQ79008.1" FT /translation="MTNNDVLRRIRYTFDFDDTKMIALFGAADLKVTREEVCNWLKSDE FT DKDYKSCQDVQLATFLNGFINDRRGKREGEQPKPEQKLTNNIILKKLQIALNLKADEVL FT DLMKLVNFRLSKHELSAFFRKADHKHYRICKDQVLRNFLQGVQFDLRGEVTEEDEENES FT E" FT misc_feature 1434297..1434500 FT /locus_tag="VSAL_I1323" FT /note="HMMPfam hit to PF07308, Protein of unknown function FT (DUF1456), score 4.8e-26" FT /inference="protein motif:HMMPfam:PF07308" FT misc_feature 1434543..1434746 FT /locus_tag="VSAL_I1323" FT /note="HMMPfam hit to PF07308, Protein of unknown function FT (DUF1456), score 1e-27" FT /inference="protein motif:HMMPfam:PF07308" FT CDS complement(1434877..1435389) FT /transl_table=11 FT /locus_tag="VSAL_I1324" FT /old_locus_tag="TVS1232" FT /product="putative exported protein" FT /note="Expression may be regulated by Fur" FT /db_xref="UniProtKB/TrEMBL:B6EKC5" FT /protein_id="CAQ79009.1" FT /translation="MKPYFLTTLLFLFLSSFKSNAESLSLYSMNTGSFLYHLVPYDPDS FT HQYFGNQYFSVERKFSEDSDYSFMVGTFLNSQANRCMLIGVRKDWYRVNDKLVIKGMYS FT YAGEFFVDAFENCGDGGIYETAKEKVGIAFAPYIYHAAQYNLTDYFGVEAGFILPGIIV FT MSMQWSF" FT sig_peptide complement(1435327..1435389) FT /locus_tag="VSAL_I1324" FT CDS complement(1435503..1436786) FT /transl_table=11 FT /locus_tag="VSAL_I1325" FT /old_locus_tag="TVS1233" FT /product="proton glutamate symport protein" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EKC6" FT /db_xref="InterPro:IPR001991" FT /db_xref="UniProtKB/TrEMBL:B6EKC6" FT /protein_id="CAQ79010.1" FT /translation="MKKSLSSRIFIGLFAGLLIGTAIQYLFNGVAFFDSFLLGAAEGVG FT GMFVSLIKLLVVPLVYVSIVCGIVELKDIASFGRLGGKTFALYLINTIIAIAAALTVGM FT IFAPGADANLAGTVVVGSVELKATETPDIFSLITNIVPSNPVEAFASGNMLQIIFMAIL FT TGLAIQALDHRGGPAIKTFKVANEIMMKLISLVMSLTPYGVFALMIQLGATLDANTLMS FT VAGYVALVVSMLVFWIFVFYPIMVGLSTGISPKTFLRAVREQILFSLSTASSNATIPVT FT MRTLTEKLNVSKSVAGFGVPLGATMNMSGVSIYIALAAIFVANAFGQPIDSADLFTLGF FT TILLLSIGAGGVPGGGVVMVGVILHQLGLPPEGLAIVAAVDRINDMFCTSSNVVGDTAV FT NTIVAKSEGEIGKAESTTDEVFTEKVNG" FT misc_feature complement(1435569..1436774) FT /locus_tag="VSAL_I1325" FT /note="HMMPfam hit to PF00375, Sodium:dicarboxylate FT symporter family, score 4.9e-77" FT /inference="protein motif:HMMPfam:PF00375" FT misc_feature complement(order(1435716..1435784,1435827..1435895, FT 1436049..1436117,1436145..1436213,1436274..1436342, FT 1436466..1436534,1436592..1436660,1436703..1436762)) FT /locus_tag="VSAL_I1325" FT sig_peptide complement(1436670..1436786) FT /locus_tag="VSAL_I1325" FT CDS 1437217..1438626 FT /transl_table=11 FT /locus_tag="VSAL_I1326" FT /old_locus_tag="TVS1234" FT /product="putative amidohydrolase" FT /note="Similar to Pseudomonas sp. Atrazine chlorohydrolase FT AtzA UniProt:P72156 (474 aa) blastp scores: E()=7e-45" FT /db_xref="GOA:B6EKC7" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="UniProtKB/TrEMBL:B6EKC7" FT /inference="similar to sequence:UniProt:P72156" FT /protein_id="CAQ79011.1" FT /translation="MYLRKSLLAVAIAAGSLFSFSASSAQQVDLMITDATLLTMNDSKE FT TFENGVVVISGNKIIAVGDKSIASKYAAKTVLDVDGDIVLPGLINTHTHASMTVFRSLG FT DDVLDRLHRYVFPLEKKLVSRDMVRIGANLGNVEMVKGGVTTYADMYYFEDEVAKTVDK FT IGMRAILGESVIKFPVADAANAEEGIQYAVNFIEEYKDHPRITPAFAPHAPYTNTTEVL FT QKIAKLSLELDVPVMIHLAESHREEEVIAERANGMSPVEYMHSIGALNKNLIGAHMILI FT DDKDIELVKESDMGVAHNMSANIKSAKGVSPALKMYDEGVRIGLGTDGPMSGNTLSIID FT EFNQVAKVHKLVNKDRAAMPPIKVIDMATMGAAKALHMEDKIGSIEVGKLADIIVVDTK FT APNMLPVYNPYSALVYSANSSNVRHTIVDGKILMKDREMLTVDEEQIRQEVLEFTKIVR FT KTVIESGEIVQ" FT sig_peptide 1437217..1437291 FT /locus_tag="VSAL_I1326" FT misc_feature 1437463..1438407 FT /locus_tag="VSAL_I1326" FT /note="HMMPfam hit to PF01979, Amidohydrolase family,score FT 1.4e-60" FT /inference="protein motif:HMMPfam:PF01979" FT misc_feature 1437463..1438401 FT /locus_tag="VSAL_I1326" FT /note="HMMPfam hit to PF07969, Amidohydrolase family,score FT 3e-05" FT /inference="protein motif:HMMPfam:PF07969" FT CDS 1438827..1440365 FT /transl_table=11 FT /locus_tag="VSAL_I1327" FT /old_locus_tag="TVS1235" FT /product="putative exported protein" FT /db_xref="GOA:B6EKC8" FT /db_xref="InterPro:IPR002477" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:B6EKC8" FT /protein_id="CAQ79012.1" FT /translation="MSRYIVFFTLLFCYFPLSAQTEDADTYIRKHQGSLYYASDVSRLY FT PNSQRKWNRAEDRKEIETQFALLILADVNNSLAKRYENLQNTEGLEYDVLATDTLLYML FT TYQSLISKYGTRWLFGGRLDNNIGKPSLFLIEKVNQHFEDDTLTALVNQLKPQSKQYQD FT LYTRLYRYYDPYHQEAPKLYSSRLLKPNQDIPYKSLVYRLQISGELNEEQIHYFLSQEG FT DKYNNELVNVVKSFQKRHGLVVDGIVGKRTLYWLNMSANERVRIMALNIQRLRLWENKN FT ARFVLVNIPSYEMGYWLKGELVFKSKVIVGKPERKTPLFTTRLDSIVFNPNWKVPTKIM FT KEDILPKALENQDYLLTHNYEVLPSWLSDEVIPFESIEWETMTVDNFPYKLRQKSGNAN FT ALGRYKFNTPNRNAIYLHDTPSRSLFNKQHRAYSSGCIRVEKASEFAQLLMKESHFTAK FT DYAGYHRLPKTNTVGLSQKIAVYTIYQTAWVDEADTIQFRNDVYRYDEWSKSKN" FT sig_peptide 1438827..1438898 FT /locus_tag="VSAL_I1327" FT misc_feature 1439400..1439606 FT /locus_tag="VSAL_I1327" FT /note="HMMPfam hit to PF01471, Putative peptidoglycan FT binding domain, score 2.9e-05" FT /inference="protein motif:HMMPfam:PF01471" FT CDS 1440531..1441082 FT /transl_table=11 FT /locus_tag="VSAL_I1328" FT /old_locus_tag="TVS1236" FT /product="putative membrane associated peptidase" FT /db_xref="InterPro:IPR009045" FT /db_xref="InterPro:IPR010275" FT /db_xref="UniProtKB/TrEMBL:B6EKC9" FT /protein_id="CAQ79013.1" FT /translation="MPEFDSLRRKILLGGVATVGLSLFPSISFASQFAESPRELAFKNL FT HTGEKLQSEYFNGQQYSNSELLKLNHLCRDFRRNETIDMDTGLFDQLSAIQKVIGCDTQ FT VQIISGYRSPATNEMLRGKSHGGVAKKSLHMLGKAMDFRLEDVPLIEVRKAALSLKAGG FT VGYYPGSNFVHIDTGRVRFW" FT sig_peptide 1440531..1440620 FT /locus_tag="VSAL_I1328" FT misc_feature 1440561..1440629 FT /locus_tag="VSAL_I1328" FT misc_feature 1440624..1441079 FT /locus_tag="VSAL_I1328" FT /note="HMMPfam hit to PF05951, Bacterial protein of unknown FT function, score 1.4e-89" FT /inference="protein motif:HMMPfam:PF05951" FT misc_feature 1440723..1441058 FT /locus_tag="VSAL_I1328" FT /note="HMMPfam hit to PF08291, Peptidase M15, score FT 1.4e-06" FT /inference="protein motif:HMMPfam:PF08291" FT CDS complement(1441205..1442605) FT /transl_table=11 FT /gene="asnS" FT /locus_tag="VSAL_I1329" FT /old_locus_tag="TVS1237" FT /product="asparaginyl-tRNA synthetase" FT /EC_number="6.1.1.22" FT /db_xref="GOA:B6EKD0" FT /db_xref="InterPro:IPR002312" FT /db_xref="InterPro:IPR004364" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR004522" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018150" FT /db_xref="UniProtKB/TrEMBL:B6EKD0" FT /protein_id="CAQ79014.1" FT /translation="MTYAPVTDVLSGKLAVDSEVTVRGWIRSRRDSKAGISFLAIYDGS FT CFDPIQAVVPNDLNNYNEEVLKLTTGCSVEVTGTIVASPAKGQDFELAATAVKVVGLVE FT DPDTYPMAKTRHSIEYLREVAHLRPRTNVIGAVARVRNCLSQAIHRFYHEQGYLWMSAP FT LITSSDAEGAGEMFRVSTLDHANVPLDDKGNVDYDKDFFGKETFLTVSGQLNAETYACA FT LSKVYTFGPTFRAENSHTSRHLAEFWMVEPEVAFADLDDVAKLAEDMLKYVFEAVLAER FT RDDLEFFASRIDKEAITRLEQFVSSDFAQVDYTDAIQILIDSGKKFEFDVEWGIDMSSE FT HERFLAEEHFKAPVIVKNYPKDIKAFYMRQNDDGKTVAAMDVLAPGIGEIIGGSQREER FT LDVLDARMIEMGIDPEHMTWYRDLRRYGTVPHAGFGLGFERLVSYVTGMGNVRDVIPFP FT RTPRSANF" FT misc_feature complement(1441220..1442257) FT /gene="asnS" FT /locus_tag="VSAL_I1329" FT /note="HMMPfam hit to PF00152, tRNA synthetases class II FT (D, K and N), score 4.8e-72" FT /inference="protein motif:HMMPfam:PF00152" FT misc_feature complement(1441274..1441303) FT /gene="asnS" FT /locus_tag="VSAL_I1329" FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT /inference="protein motif:ProSite:PS00339" FT misc_feature complement(1441853..1441909) FT /gene="asnS" FT /locus_tag="VSAL_I1329" FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT /inference="protein motif:ProSite:PS00179" FT misc_feature complement(1442306..1442548) FT /gene="asnS" FT /locus_tag="VSAL_I1329" FT /note="HMMPfam hit to PF01336, OB-fold nucleic acid binding FT domain, score 4.7e-17" FT /inference="protein motif:HMMPfam:PF01336" FT CDS 1442862..1443224 FT /transl_table=11 FT /locus_tag="VSAL_I1330" FT /old_locus_tag="TVS1238" FT /product="6-pyruvoyl tetrahydrobiopterin synthase" FT /EC_number="4.2.3.12" FT /db_xref="GOA:B6EKD1" FT /db_xref="InterPro:IPR007115" FT /db_xref="UniProtKB/TrEMBL:B6EKD1" FT /protein_id="CAQ79015.1" FT /translation="MTTELYKDFMFEAAHHLPHVPEGHKCGRLHGHSFLVRLYVEGEVD FT QHTGWVIDFSEIKAAFKPTYDRLDHYYLNDIKGLENPTSEVLAKWIWNEVKPSLPLLSK FT IEIKETCTAGCTYRGQ" FT misc_feature 1442862..1443221 FT /locus_tag="VSAL_I1330" FT /note="HMMPfam hit to PF01242, 6-pyruvoyl tetrahydropterin FT synthase, score 7e-61" FT /inference="protein motif:HMMPfam:PF01242" FT CDS complement(1443279..1444295) FT /transl_table=11 FT /locus_tag="VSAL_I1331" FT /old_locus_tag="TVS1239" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR005135" FT /db_xref="UniProtKB/TrEMBL:B6EKD2" FT /protein_id="CAQ79016.1" FT /translation="MLTIESITFTTINMFNFVEPPNAYYDFENILTQEEWQKKQDWFKN FT RITTLNSDVIGFQEVFSPEALEALVNSLGYPYFCTVDEPKSEDGYVFHSPVVAFASRYP FT IVSSQPVIAKSEQLARFGIEFEFNRVPVHASIDLPHLGVTDCYVVHFKSQRPKDPIEID FT GIEEPESTPLTQLHDEQLGSWLSSAQRGLEANTLHQYITTQRKKSSQPVVLMGDFNKPL FT FHNEFIGLLSHQLRYDKFSTDYLTTFQLKDSWDIYSQLKGTDLLEERVSTHYYGAKGSV FT LDYILLSNEFDSSYSGSLLEVTEYRVVDLHIVNPRFDIDQFSTDHALVSITARIRQA" FT misc_feature complement(1443297..1444277) FT /locus_tag="VSAL_I1331" FT /note="HMMPfam hit to FT PF03372,Endonuclease/Exonuclease/phosphatase fa, score FT 3.6e-06" FT /inference="protein motif:HMMPfam:PF03372" FT CDS 1444489..1445733 FT /transl_table=11 FT /gene="sbcD" FT /locus_tag="VSAL_I1332" FT /old_locus_tag="TVS1240" FT /product="nuclease sbcCD subunit D" FT /db_xref="GOA:B6EKD3" FT /db_xref="InterPro:IPR004593" FT /db_xref="InterPro:IPR024654" FT /db_xref="UniProtKB/TrEMBL:B6EKD3" FT /protein_id="CAQ79017.1" FT /translation="MRILHTSDWHLGQNFFTKSRRNEHQKFIAWLLEQVQENVINAVII FT AGDVFDTGAPPSYAREMYNQFVVEMNKVNCELIVLGGNHDSVSTLNESKQLLAHLNARV FT IANTNEDLSTQLLTLPNSDGTVGAILCAVPFIRPRDVVTSVAGSSGVEKQQALGEAIKS FT HYHQLYQKALELREELALDVPIIATGHLTALGVKQSDSVRDIYIGTLDGFAADGFPPAD FT YIALGHIHRPQLVAKSEHIRYSGSPIPLSFDELKSQKQVVMVEFDKDKVSHITPINVPI FT FQEMKALKGDLETIEQELAQFKECEETTWLCIEVEVQDYLSDLQQRIQTLTQDLNVEVL FT QLRRARNRNEQTLAQEKTETLAELTPFDVFTKRIEQEIFETEKEQQRAERMTTKFKQIL FT SEVEHKDTDPQEGDA" FT misc_feature 1444489..1445184 FT /gene="sbcD" FT /locus_tag="VSAL_I1332" FT /note="HMMPfam hit to PF00149, Calcineurin-like FT phosphoesterase, score 1e-14" FT /inference="protein motif:HMMPfam:PF00149" FT CDS 1445730..1449410 FT /transl_table=11 FT /gene="sbcC" FT /locus_tag="VSAL_I1333" FT /old_locus_tag="TVS1241" FT /product="nuclease sbcCD subunit C" FT /db_xref="UniProtKB/TrEMBL:B6EKD4" FT /protein_id="CAQ79018.1" FT /translation="MRILSLSFSNLNSLKGEWKIDFSASPFAENGLFAITGPTGAGKTT FT ILDAICLALYHKTPRLGGISTSSNEIMTRGTAECSAEVEFEVKGKAYRAFWSQRRSRGK FT VDGNLQAATVELAEVDSEKVLATQVKKKDELINSITGLDFSRFTKSMMLSQGQFAAFLN FT ADANDRAGLLEELTGTEIYGQISEKVHEHYSASKQKLAELKAKAEGVELLSEEDKQALI FT DEQTELQTNQKQQQAQVAEWQTHLEWWISDTKNQQQWQQASENNQLALDKQKSASIQLH FT RLAQSEPAEKLRTPYQLWKEAQTRFDSLVKELTLTEQLHQKTAAEKVDLGSTVTQLKQR FT FDRIKVESKSLEVLINDSVQPLDTAIEQLTQQSQEKQQQLTQVNTRLQDGSNKQQRLEA FT SLTELTSKLAVLNSYVETHQSDLNLERYLGQWKTQVSYILQQDKEVSSLVDKIEKANKI FT VATLLENVSQKEAELTQVQSTLNNETEVTKNAELVFKQQQEKGTETELTEQINALNTRH FT HYRVELNHTNNEFLRAEKEQQTLSEAQKAQSETILKLEAQRADLVIACKQQDQQILDLT FT TLIEQEDDLVKYRALLEKDHDCPLCGSTHHPLLEKAQTLDINVTIQRKKAAEQKRVEIV FT EQGQLVREKLDSLKVKQDHTQTQLTQWQQTAKMTKQQWSSLMEVTQLTLALGNTNGITQ FT FITECEASLLTLSEQIKQLRQADEKCRVQQTQLQQVQHRLDTLTKDLNYDRQSHQVATQ FT QLQDDNQKLVQLQQHQTELNQQLITEIEQTGFTAPEFTQIQSWFVQKEQDLQQIQQQVK FT NRQALLQQQQQVQSDQVHLAEQLEELNSQQQVSQTEVQRLASELEQHQQKRVELFGTQE FT IKTARSVMTDKLSVSEKTYDAEQQKLHVLVQALAALDGKLNSLKENHVSSEKLSIERSD FT LWKEALVQSPFETLELFQAALISEEDRQQLLSLKTEIQQAIERTGALLESAQQVKEQHY FT QEPKAVEWQLMTKETVETELAQVKFQSETLVKREGEIAQALRSDGERKLNQKSLFDEIE FT SYQFEYDDIQYLHSLIGSQKGDKFRKFAQGLTLENLVYLANKQLTRLHGRYELKRKASD FT GLELQVLDTWQGDVVRDTKTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTL FT DSETLDMALDALDNLNASGKMIGVISHIEAMKERIPVQIKVTKRSGLGVSELENQYKKV FT S" FT misc_feature 1445733..1449374 FT /gene="sbcC" FT /locus_tag="VSAL_I1333" FT /note="HMMPfam hit to PF02463, RecF/RecN/SMC N terminal FT domain, score 6.3e-08" FT /inference="protein motif:HMMPfam:PF02463" FT misc_feature 1445838..1445861 FT /gene="sbcC" FT /locus_tag="VSAL_I1333" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS 1449467..1449952 FT /transl_table=11 FT /locus_tag="VSAL_I1334" FT /old_locus_tag="TVS1242" FT /product="putative thioesterase" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:B6EKD5" FT /protein_id="CAQ79019.1" FT /translation="MGKNKREVTLRFLAEPSDVNFGGKVHGGAVMKWVDLAAYACSAGW FT SGKYCITAYAGGIRFVQPIHVGNLVEVTGKVIYTGKSSMHIAIDVQASDPKELENRLTT FT HCIVIMVAVDEHGKPTEVTEWVPQTEEDIKLRESAITLMNMRKQIGEEMEAHVKYLK" FT misc_feature 1449530..1449763 FT /locus_tag="VSAL_I1334" FT /note="HMMPfam hit to PF03061, Thioesterase FT superfamily,score 1.6e-17" FT /inference="protein motif:HMMPfam:PF03061" FT repeat_region complement(1450223..1451661) FT /note="VSa9" FT CDS complement(1450389..1451582) FT /transl_table=11 FT /locus_tag="VSAL_I1335" FT /old_locus_tag="TVS1243" FT /product="transposase" FT /db_xref="GOA:B6EIP3" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EIP3" FT /protein_id="CAQ79020.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 1451850..1452038 FT /pseudo FT /transl_table=11 FT /gene="vcmH" FT /locus_tag="VSAL_I1336" FT /old_locus_tag="TVS1244" FT /product="multidrug efflux pump (fragment)" FT /note="Similar to N-terminal part of Vibrio cholerae non-O1 FT Multidrug efflux pump VcmH UniProt:Q4W668 (458 aa) fasta FT scores: E()=4.6e-09, 62.963% id in 54 aa. The CDS appears FT to be truncated at the C-terminus. The sequence has been FT checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ79021.1" FT /inference="similar to sequence:UniProt:Q4W668" FT misc_feature 1451907..1451963 FT /gene="vcmH" FT /locus_tag="VSAL_I1336" FT CDS 1452557..1453711 FT /transl_table=11 FT /locus_tag="VSAL_I1337" FT /old_locus_tag="TVS1245" FT /product="tyrosine-specific transport protein (tyrosine FT permease)" FT /db_xref="GOA:B6EKD8" FT /db_xref="InterPro:IPR002091" FT /db_xref="InterPro:IPR018227" FT /db_xref="UniProtKB/TrEMBL:B6EKD8" FT /protein_id="CAQ79022.1" FT /translation="MNLKLIGSSLIISGTALGAGMLAIPMVLAQFGLLWGTALMLFICI FT GTTYAALLLLEASINVGGGLGMNTIARKTLGKGGQVVTNGLLYALLICLLMAYILGAGD FT LLNKLVRSIGMDLSLVQSQIAFTLIAGAIVASGTAVIDKLNRVLFAVMLGMLLLTLVFL FT VPGISAENMVQVSNSNMPDLIKTSSIIFTSFGFMVVIPSLVSYNHEATHKQLRNMVIVG FT SLIPLVCYLVWLYAVVGNLTSKQLVEFSNVSELISVFSAEHAFINVVLSSFTGLALLTS FT FLGVAMALFTQNQDTFKQNKVITYVISFIFPLAGAILAADKFLAVLSYAGIILVFLAVF FT VPLAMVVKLRQKETNEQGYKAEGGVAMLAFSFAFGSFLLVSQVL" FT misc_feature 1452557..1453702 FT /locus_tag="VSAL_I1337" FT /note="HMMPfam hit to PF03222, Tryptophan/tyrosine permease FT family, score 2.5e-53" FT /inference="protein motif:HMMPfam:PF03222" FT sig_peptide 1452557..1452706 FT /locus_tag="VSAL_I1337" FT misc_feature order(1452575..1452643,1452671..1452739,1452797..1452865, FT 1452908..1452976,1452995..1453063,1453106..1453174, FT 1453211..1453279,1453358..1453426,1453460..1453516, FT 1453529..1453597,1453631..1453699) FT /locus_tag="VSAL_I1337" FT CDS join(1453794..1454945,1455953..1455970) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1338" FT /old_locus_tag="TVS1246" FT /product="tyrosine-specific transport protein (tyrosine FT permease) (pseudogene)" FT /note="Similar to Escherichia coli Tyrosine-specific FT transport protein (Tyrosine permease) UniProt:P0AAD4 (403 FT aa) fasta scores: E()=2.4e-26, 32.824% id in 393 aa. CDS is FT disrupted by the insertion of an IS element after codon FT 384. There is an inframe translational stop codon 6 amino FT acid residues further downstream within the IS element. The FT extended CDS may therefore be expressed and functional" FT /db_xref="PSEUDO:CAQ79023.1" FT /inference="similar to sequence:UniProt:P0AAD4" FT misc_feature 1453794..1454960 FT /locus_tag="VSAL_I1338" FT /note="HMMPfam hit to PF01490, Transmembrane amino acid FT transporter pro, score 0.00027" FT /inference="protein motif:HMMPfam:PF01490" FT misc_feature 1453794..1454954 FT /locus_tag="VSAL_I1338" FT /note="HMMPfam hit to PF03222, Tryptophan/tyrosine permease FT family, score 1e-45" FT /inference="protein motif:HMMPfam:PF03222" FT sig_peptide 1453794..1453880 FT /locus_tag="VSAL_I1338" FT misc_feature order(1453806..1453874,1453884..1453952,1454034..1454102, FT 1454145..1454213,1454232..1454300,1454343..1454411, FT 1454448..1454516,1454595..1454663,1454697..1454753, FT 1454766..1454834,1454895..1454954) FT /locus_tag="VSAL_I1338" FT repeat_region 1454948..1455952 FT /note="VSa6" FT repeat_region 1454948..1454966 FT /note="IR of VSa6" FT CDS 1455044..1455925 FT /transl_table=11 FT /locus_tag="VSAL_I1339" FT /old_locus_tag="TVS1248" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ79024.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT repeat_region 1455934..1455952 FT /note="IR of VSa6" FT CDS 1456036..1456395 FT /transl_table=11 FT /locus_tag="VSAL_I1340" FT /old_locus_tag="TVS1249" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR021242" FT /db_xref="UniProtKB/TrEMBL:B6EKE1" FT /protein_id="CAQ79025.1" FT /translation="MKRLVVLAITLMIAACSSTPVPTSMMDKDWKDFGYERALKGLVIQ FT SESILVKKLDGETLKDTNYQSYLAGYKEGQAEYCQKDAYILGVKGESYNGICDVIDWTF FT REDYSSGRHSTAGGM" FT sig_peptide 1456036..1456110 FT /locus_tag="VSAL_I1340" FT misc_feature 1456051..1456083 FT /locus_tag="VSAL_I1340" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1456444..1456803 FT /transl_table=11 FT /locus_tag="VSAL_I1341" FT /old_locus_tag="TVS1250" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR021242" FT /db_xref="UniProtKB/TrEMBL:B6EKE2" FT /protein_id="CAQ79026.1" FT /translation="MRALLITVFALSLMACSSLAPLTSTLDSDWNSYGLDRGVKGWNFE FT SKEQITDLLDGTELKASNYDAYVSGYKKGLQEYCGQDAFELGTKGGVYTGVCDSIDKNF FT KYDYLRGYHSVADKM" FT sig_peptide 1456444..1456503 FT /locus_tag="VSAL_I1341" FT misc_feature 1456459..1456491 FT /locus_tag="VSAL_I1341" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1456867..1457409) FT /transl_table=11 FT /locus_tag="VSAL_I1342" FT /old_locus_tag="TVS1251" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EKE3" FT /protein_id="CAQ79027.1" FT /translation="MNKKKHTLSPRAQELRAEWTGMKSDHRFISHSFNCVKVHIHTPDD FT GMYNRSVGCLKQGRDKALKEALKQRNQVGRELWGSCWNAVLNTQSLFERLPHSLEPDVI FT EKKRTLLSGEVRGTKYYIVRWKELVGDEYKPKSRLFIHGDDRLGAYTKAKKLMIEVHKE FT FIPILKKMGRFNIIKVS" FT CDS complement(1457621..1458982) FT /transl_table=11 FT /gene="sdaA" FT /locus_tag="VSAL_I1343" FT /old_locus_tag="TVS1252" FT /product="L-serine dehydratase 1" FT /EC_number="4.3.1.17" FT /note="Expression may be regulated by Fur" FT /db_xref="GOA:B6EKE4" FT /db_xref="InterPro:IPR004644" FT /db_xref="InterPro:IPR005130" FT /db_xref="InterPro:IPR005131" FT /db_xref="UniProtKB/TrEMBL:B6EKE4" FT /protein_id="CAQ79028.1" FT /translation="MISVFDIYKIGVGPSSSHTVGPMKAGKEFIDDLRGMGKLRDITKI FT TVDVYGSLSLTGKGHHTDIAIIMGLAGNTPEHVDIDSIPGFIARVEETERLPVGMHCHT FT VEFPKDGGMNFHKTNLELHENGMQIHAWIDGEVVYSKTYYSIGGGFIVDEEHFGKEVES FT SIKVPYAFNSAEELVNLCKEHGLSISALVMKNEHAILAEDEVRTYFAKIWKTMRDCMEK FT GMNTEGLLPGPLRVPRRAAALRQQLLTSEKTSTDPMEVLDWVNMFAFAVNEENAAGGRV FT VTAPTNGACGIIPAVLAYYDKFIQTVTEKDYIRYFAASGAIGGLYKQNASISGAEVGCQ FT GEVGVACSMAAAGLAELMGGSPEQVCMAAEIGMEHNLGLTCDPVAGQVQVPCIERNGIA FT SVKAINSTRMALRRSSDPRVSLDKVIETMLETGKDMNAKYRETSQGGLAIKVIC" FT misc_feature complement(1457633..1458469) FT /gene="sdaA" FT /locus_tag="VSAL_I1343" FT /note="HMMPfam hit to PF03313, Serine dehydratase alpha FT chain, score 1.3e-187" FT /inference="protein motif:HMMPfam:PF03313" FT misc_feature complement(1458506..1458976) FT /gene="sdaA" FT /locus_tag="VSAL_I1343" FT /note="HMMPfam hit to PF03315, Serine dehydratase beta FT chain, score 2.5e-88" FT /inference="protein motif:HMMPfam:PF03315" FT CDS complement(1459080..1460330) FT /transl_table=11 FT /gene="sdaC" FT /locus_tag="VSAL_I1344" FT /old_locus_tag="TVS1253" FT /product="serine transporter" FT /db_xref="InterPro:IPR018227" FT /db_xref="UniProtKB/TrEMBL:B6EKE5" FT /protein_id="CAQ79029.1" FT /translation="MQTTTTASTGAKKAKWTYKDFTWCLSLFGTAVGAGVLFLPIKAGA FT GGFWPLVILALIAAPMTWFAHKSLARFVLSAKNPDADITDTVEEHFGKTGANLITFAYF FT FAIYPIVLIYGVGITNTVDSFMVNQMGMESIPRWLLSGVLITLMTCGVVFGKELMLKAT FT SAMVYPLVFILMVLSVYLIPEWNTSMASVAPDWSAMPSVVWLAIPIIVFSFNHSPVISQ FT FSKEQRRVYGENAVAKTDMITGGAAMMLMSFVMFFVFSVVLSLSPEQLAQAQAQNISVL FT SYLANVHESPMISIMGPVVAFAAITSSYFGHFLGAHEGLVGLTKSHTKAPLATVEKGSL FT IFIVVTTWIVSIVNPSILGMIETMGAPMIAAILFLMPVFAMRKVPAMAKYKTSAPVQIF FT TALCGVAAITSVIYGAL" FT misc_feature complement(order(1459086..1459154,1459188..1459241, FT 1459251..1459319,1459380..1459448,1459542..1459610, FT 1459671..1459739,1459782..1459841,1459866..1459919, FT 1459977..1460045,1460136..1460204,1460214..1460270)) FT /gene="sdaC" FT /locus_tag="VSAL_I1344" FT misc_feature complement(1459104..1460276) FT /gene="sdaC" FT /locus_tag="VSAL_I1344" FT /note="HMMPfam hit to PF03222, Tryptophan/tyrosine permease FT family, score 4.5e-05" FT /inference="protein motif:HMMPfam:PF03222" FT CDS complement(1460522..1461130) FT /transl_table=11 FT /locus_tag="VSAL_I1345" FT /old_locus_tag="TVS1254" FT /product="NUDIX hydrolase" FT /db_xref="GOA:B6EKE6" FT /db_xref="InterPro:IPR000086" FT /db_xref="InterPro:IPR015797" FT /db_xref="UniProtKB/TrEMBL:B6EKE6" FT /protein_id="CAQ79030.1" FT /translation="MSLKLRIRLMDTHLLSHLLLNKPNSYSEDLLLHPRFKNTNFKQAA FT VLVPLVKRPSGLHLILTQRAAHLHHHPSQISFPGGKAEPSDLSLIHTAIRETNEEIGIQ FT LEQIHPLVKLNTIPTISGYKVTPIVALIDENYTTAIDYGEVSSTFEAPLSHLLNPMNTT FT KHKVFNKKHTYELIFIPFNKKLIWGITAEIIHSMNHITN" FT misc_feature complement(1460606..1461007) FT /locus_tag="VSAL_I1345" FT /note="HMMPfam hit to PF00293, NUDIX domain, score 1.1e-09" FT /inference="protein motif:HMMPfam:PF00293" FT CDS complement(1461130..1462500) FT /transl_table=11 FT /gene="pabB" FT /locus_tag="VSAL_I1346" FT /old_locus_tag="TVS1255" FT /product="para-aminobenzoate synthase component I" FT /note="unknown EC_number=6.3.5.8" FT /db_xref="GOA:B6EKE7" FT /db_xref="InterPro:IPR005801" FT /db_xref="InterPro:IPR005802" FT /db_xref="InterPro:IPR006805" FT /db_xref="InterPro:IPR015890" FT /db_xref="InterPro:IPR019999" FT /db_xref="UniProtKB/TrEMBL:B6EKE7" FT /protein_id="CAQ79031.1" FT /translation="MNNQLDAKLQMTSLDYQSNSLVDLFSAIESQPWSMLLHSSAVAHV FT DNRYDIVVSDPIATLQTHDKITSINIKGRDLITSEDCPFELLAHYQESLTPSCDSITDL FT PFIGGALGYFSYDLGRRVESIPNISEKDIPTAEMAIGIYDWALVADHKKKTLTLIQPNN FT SDRLAWLQPFTAIQEEKLSFQLTTPWSSNMTKIEYSEKFDVISEYLQSGDCYQINLAQR FT FSAHYEGSEWLAYQKLAINNGAPFSAFIRTPELTIISVSPERFLHVKDKQIETKPIKGT FT RPRSKDPVIDAKEAEILRNSAKDRSENLMIVDLLRNDIGRVAKPGSVNVPSLFAIESFP FT AVHHLVSTITGELNTGYSAFDLLKASFPGGSITGAPKIRAMEIIEELEPHRRNLYCGSI FT GYISRCGAMDTSITIRTLIAYDDTLYASAGGGIVADSEVELEYEETLHKLSKILPIL" FT misc_feature complement(1461142..1461921) FT /gene="pabB" FT /locus_tag="VSAL_I1346" FT /note="HMMPfam hit to PF00425, chorismate binding FT enzyme,score 1.6e-120" FT /inference="protein motif:HMMPfam:PF00425" FT misc_feature complement(1462027..1462455) FT /gene="pabB" FT /locus_tag="VSAL_I1346" FT /note="HMMPfam hit to PF04715, Anthranilate synthase FT component I, N, score 8.2e-27" FT /inference="protein motif:HMMPfam:PF04715" FT CDS 1462671..1464215 FT /transl_table=11 FT /locus_tag="VSAL_I1347" FT /old_locus_tag="TVS1256" FT /product="fumarate hydratase class I" FT /EC_number="4.2.1.2" FT /db_xref="GOA:B6EKE8" FT /db_xref="InterPro:IPR004646" FT /db_xref="InterPro:IPR004647" FT /db_xref="InterPro:IPR011167" FT /db_xref="UniProtKB/TrEMBL:B6EKE8" FT /protein_id="CAQ79032.1" FT /translation="MTNVNKEMVAQTRTTIRNEDVISSVADALQYISYYHPLDFVQALE FT KAYHREQSQAAKDAIAQILINSRMSAEGRRPICQDTGIVTCFVNIGMNVQWEGDLTVQQ FT MIDEGTRQAYLNPDNPLRASILSDPAGKRINTKDNTPSVVHINMVPGNTVEIQIAAKGG FT GSENKTKMVMLNPSDDIAEWVEKTLPLMGAGWCPPGMLGIGIGGTAEKAAVLAKESLMG FT HIDIQELIDRGPENAEEELRLDIFNRVNKLGIGAQGLGGLTTVVDVKIKSAPTHAASKP FT VCMIPNCAATRHVHFTLDGSGPADLQPPKLEEWPDITWEAGANTRRVNLDGLTKADVQE FT WRTGETVLLTGKILTGRDAAHKRLQSMIESGEGLPEGVDFNGKFIYYVGPVDAVRDEAV FT GPAGPTTSTRMDKFTDMMLETGLMGMIGKAERGPATVASIKAKKAVYLMAVGGAAYLVS FT KAIKKARVVAFEELGMEAIYEFDVEDMPVTVAVDSTGANAHQIGPDTWKVKIAEME" FT misc_feature 1462731..1463564 FT /locus_tag="VSAL_I1347" FT /note="HMMPfam hit to PF05681, Fumarate hydratase FT (Fumerase), score 2.4e-153" FT /inference="protein motif:HMMPfam:PF05681" FT misc_feature 1463568..1464185 FT /locus_tag="VSAL_I1347" FT /note="HMMPfam hit to PF05683, Fumarase C-terminus, score FT 2.2e-111" FT /inference="protein motif:HMMPfam:PF05683" FT repeat_region complement(1464233..1465237) FT /note="VSa6" FT repeat_region complement(1464233..1464251) FT /note="IR of VSa6" FT CDS complement(1464260..1465141) FT /transl_table=11 FT /locus_tag="VSAL_I1348" FT /old_locus_tag="TVS1257" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ79033.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature complement(1464320..1464814) FT /locus_tag="VSAL_I1348" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(1465219..1465237) FT /note="IR of VSa6" FT repeat_region complement(1465278..1466689) FT /note="VSa1" FT repeat_region complement(1465278..1465296) FT /note="IR of VSa1" FT CDS complement(1465291..1466616) FT /transl_table=11 FT /locus_tag="VSAL_I1349" FT /old_locus_tag="TVS1258" FT /product="transposase" FT /db_xref="GOA:B6EGT0" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR024473" FT /db_xref="UniProtKB/TrEMBL:B6EGT0" FT /protein_id="CAQ79034.1" FT /translation="MHLDFFMDVSQALNIINDWKPSNVETLADLLPIHLIDEAYSLTDT FT VTMRKRKLTLESMVWLLVGMAIYNNKSMKDLVNQLDIVDRTGKAFVAPSALTQRRKNLG FT EAAMKAVFERMTSSWLKSANLPKWNGLTLLGVDGVVWRAPDNQKNEEAFSRQKGTQYPQ FT VRMVCQMELSSHLITASAFDNYNTNEMILAEKLIDSTPDHSVTMFDKGFYSLGLLHKWQ FT MTGSERHWLIPLKKNTQYEIIRSLGRNDKLVILRSNPRARKLFSNLPETMTARLVTRKI FT KGKDYQVLTSMIDPLRYPLKDIVGLYEHRWEIELGYREQKQYMLGNRLTLRSRLPELVK FT QELWGILLTYNLIRYQMVELCFNLKGNYLPYQLSFNGTLAHVSALLVGLPYSTPGAIPR FT QLKGFHQMAESLILDRRRERTFPRMVKPRPQRYARNKNAIHP" FT misc_feature complement(1465561..1466220) FT /locus_tag="VSAL_I1349" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 7.6e-28" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(1466671..1466689) FT /note="IR of VSa1" FT CDS 1466801..1467163 FT /transl_table=11 FT /locus_tag="VSAL_I1350" FT /old_locus_tag="TVS1259" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR021242" FT /db_xref="UniProtKB/TrEMBL:B6EKF1" FT /protein_id="CAQ79035.1" FT /translation="MKLFISAILALLLVGCSSSSQAEKEKNADDWFNYGEFRAKKGFVV FT QTQEQLEAMNPKEVITGEFYNAYFSGHQEGTIVYCTQVPYILGLSEEPYFGLCDQSHPK FT FKEEYEKGVNHKKNKK" FT sig_peptide 1466801..1466866 FT /locus_tag="VSAL_I1350" FT misc_feature 1466816..1466848 FT /locus_tag="VSAL_I1350" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1467216..1468289 FT /transl_table=11 FT /locus_tag="VSAL_I1351" FT /old_locus_tag="TVS1260" FT /product="putative multidrug resistance protein precursor" FT /note="Similar to Pseudomonas aeruginosa Multidrug FT resistance protein MexA precursor UniProt:P52477 (383 aa) FT blastp scores: E()=9e-17" FT /db_xref="GOA:B6EKF2" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:B6EKF2" FT /inference="similar to sequence:UniProt:P52477" FT /protein_id="CAQ79036.1" FT /translation="MLLYKNYHYKELFMFKKTAVATLLSSVLLMGCDSKAPQIAEPESR FT PAKTMVVSIGNQATSRLFPAQAEAGDKAVLAFRVPGQLNTLEVHAGEMVSKGQQLATIN FT PDEYRLLQKQAQAQYRLIDVQYQRTKKLRKDQVVSEQDYDTAVANRKTAKAALDQAKAN FT LSYTKLIAPYEGTISLLPSENFEYVSAKQSIMHIQTNDIFYVVFQLPDYLLQRFSFSEV FT EATVTFDSFPNFQFPLEFEEIDTEADSKTSSYTVKMSMARPTELGILPGMSGQVKVTIP FT SGESEKLPVGAIDTEGDKTYVWRVAEDGRVEKVEVELSDKRQILSGINDSDQIVSSGIA FT GLEEGMKVRKWVKERGL" FT sig_peptide 1467216..1467329 FT /locus_tag="VSAL_I1351" FT misc_feature 1467279..1467311 FT /locus_tag="VSAL_I1351" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS 1468292..1469371 FT /transl_table=11 FT /locus_tag="VSAL_I1352" FT /old_locus_tag="TVS1261" FT /product="organic solvent efflux pump precursor FT (periplasmic linker protein component)" FT /note="Similar to Pseudomonas putida Solvent efflux pump FT periplasmic linker SrpA precursor UniProt:O31099 (382 aa) FT fasta scores: E()=9.6e-13, 26.829% id in 369 aa" FT /db_xref="GOA:B6EKF3" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:B6EKF3" FT /inference="similar to sequence:UniProt:O31099" FT /protein_id="CAQ79037.1" FT /translation="MQKLMRFSLLSTALLLTACKPAPIDTVLEAPDVIIKTINSGLVSD FT HLYLPAVATAADRSHLSFRLSGEIKELNVRSGETVKAGQVLAILDKTDYNIDVDNARAR FT YNVANSQYRRSKPLVDKGLLAKSQFDELAAQRQIALADLELAKLRLSFTELKAPIDGII FT SRVSVEQFENIQVGQQIFNIHNRSAVDITVQVPDKLYAKQPNKGLVDKIKASVRLDDGS FT SYQATVKEFTTEPDPESGAYLVTLTMPMPKDQFILDGMAVEVTTEQSSLGASSQFGMVI FT PIEAVFNEDGDNIDRDEKYVWLVDSDNKVKKQKIITTKATSSGLRVVEGVTTGDRIVIA FT GVSRLRDGIEVNIINTEEK" FT sig_peptide 1468292..1468345 FT /locus_tag="VSAL_I1352" FT misc_feature 1468316..1468348 FT /locus_tag="VSAL_I1352" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT misc_feature 1468460..1469308 FT /locus_tag="VSAL_I1352" FT /note="HMMPfam hit to PF00529, HlyD family secretion FT protein, score 0.00041" FT /inference="protein motif:HMMPfam:PF00529" FT CDS 1469371..1472448 FT /transl_table=11 FT /locus_tag="VSAL_I1353" FT /old_locus_tag="TVS1262" FT /product="putative multi-drug efflux protein" FT /note="Similar to Ralstonia metallidurans FT Cobalt-zinc-cadmium resistance protein CzcA UniProt:P13511 FT (1063 aa) blastp scores: E()=2e-66" FT /db_xref="GOA:B6EKF4" FT /db_xref="InterPro:IPR001036" FT /db_xref="UniProtKB/TrEMBL:B6EKF4" FT /inference="similar to sequence:UniProt:P13511" FT /protein_id="CAQ79038.1" FT /translation="MSQEKGIAAYFIQNKVISWMLTLIFIIGGTSAFFGLGRLEDPAFT FT IKDAMVVTNYPGATPEQVEEEVTYPLEKAIQQLTYVDEVNSLSSRGLSQITVTMKNNYG FT PDDLPQIWDELRRKVNDLKRQLPPGVGEPSVIDDFGDVYGVLLAVTGQGYSYKELLDYV FT DYLRRELELVDGVSKVSVSGVQQEQVFIEASLKRMTSLGISPQTLYSLLSEQNTVSSAG FT AVKIGSEYIQIHPTGEFQDVSQLGDLIITEGGAQGLIYLKDIATVKRGYVEVPSNLINF FT NGNFALNMGISFSAGVNVVEIGKLVDQRMLELKNQQPIGIDISEIYSQPKEVDKSVSGF FT VVSLAQAVAIVIIVLLFFMGVRSGLLIGLILLITVCGTFVFMKYLAIDLQRISLGALVI FT ALGMLVDNAIVVVEGILIGMQKGRTRMQAATDIVTQTKWPLLGATVIAVTAFAPIGLSD FT DATGEYCGTLFTVLLISLMLSWFTAISLTPFFASLFFKETVQVEGENNEDKDPYNGMIF FT VIYKRFLEFCMRYSIATMLILVVALGGSMYGFTKVKQSFFPSSTTPIFLVDVWMPEGTD FT IRSTNKTLKELEDWILEQKHIDHVTTTAGKGLQRFMLTYAPEKSYAAYGEIMTRVDDYN FT ALLALMAKFRQHIETNYPQIQYKLKQIELGPGGGAKVEARIVGADPTVLRSLAAQVIEV FT MHNDPSATNIRHDWRERTKVLEPQFNESQARRYGISKTDVNELLEMAFAGKAIGVYRDG FT TTLMPIVTRLPENERVDISTIEGMKIWSPALSLYIPLQQVVLGYDVIWEDPLIVRKNRK FT RMLTIMADPDILGEETAATLQKRLQPQIEAIDFPTGYSLEWGGEYESSRDAQASLFQTM FT PMGYLFMFLVTVFLFNSVKESVIVWLTVPLALIGVTTGLLALNTPFGFMALLGFLSLSG FT MLLKNGIVLLDQIEIEIHSGKEPYHAVVDAALSRVRPVCMAAITTILGMIPLLPDTFFK FT PMAVTIMFGLGFATVLTLIVVPVLYRMFHKIKVVEY" FT misc_feature 1469389..1472424 FT /locus_tag="VSAL_I1353" FT /note="HMMPfam hit to PF00873, AcrB/AcrD/AcrF family,score FT 5.1e-95" FT /inference="protein motif:HMMPfam:PF00873" FT misc_feature order(1469413..1469481,1470202..1470270,1470376..1470444, FT 1470463..1470531,1470559..1470627,1470685..1470738, FT 1470781..1470849,1470946..1471014,1471969..1472028, FT 1472047..1472106,1472119..1472187,1472248..1472316, FT 1472344..1472412) FT /locus_tag="VSAL_I1353" FT CDS 1472721..1473107 FT /transl_table=11 FT /locus_tag="VSAL_I1354" FT /old_locus_tag="TVS1263" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR021284" FT /db_xref="UniProtKB/TrEMBL:B6EKF5" FT /protein_id="CAQ79039.1" FT /translation="MSQLDQQTIEKIVNSHEEERFTYFMKEVVANREIWILTDEHGCVM FT LNTEEEDCVPVWPNKEFAEAWATGEWDVCKAESISLNKWHSRWTTGLEDDELAVVVFPN FT QNEEGQVLFPDEFDFELTKQERKR" FT CDS complement(1473236..1474426) FT /transl_table=11 FT /gene="metC" FT /locus_tag="VSAL_I1355" FT /old_locus_tag="TVS1264" FT /product="cystathionine beta-lyase" FT /EC_number="4.4.1.8" FT /db_xref="GOA:B6EKF6" FT /db_xref="InterPro:IPR000277" FT /db_xref="InterPro:IPR006233" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:B6EKF6" FT /protein_id="CAQ79040.1" FT /translation="MSDKLDTKYVTAGRSKKWTKGVVNPPVQRASTVVFNSVAEKNHAM FT VNRAKQTLFYGRRGTETHFALQDAMVELEGGAGCALYPCGTAAIANAILCFVKTGDHIL FT MVDGCYEPTRDYCDTMLKKMGIETTYYDPMIGEGIRDLIKPNTTVLFTESPCSITMEVQ FT DVPLLARIAHESDIVVMLDNTWAAGVNFSPFDHGVDISIQAATKYIVGHSDVMLGTAVA FT NEKHWDQLREQSYLMGQCISPDDAYLAMRGLRTMGVRLKQHEKSSIKIANWLAEHPLVD FT HVRHPALESCLGNDIYQRDFTGCNGLFSFVLKQSDTKATTALLDSMTHFNMGYSWGGFE FT SLILANEPKSFNALRTVAHPNFEGTLIRLHIGLEDIDDLIEDLEEGLALYQETLSA" FT misc_feature complement(1473263..1474411) FT /gene="metC" FT /locus_tag="VSAL_I1355" FT /note="HMMPfam hit to PF01053, Cys/Met metabolism FT PLP-dependent enzy, score 7.3e-135" FT /inference="protein motif:HMMPfam:PF01053" FT misc_feature complement(1473788..1473832) FT /gene="metC" FT /locus_tag="VSAL_I1355" FT /note="PS00868 Cys/Met metabolism enzymes FT pyridoxal-phosphate attachment site." FT /inference="protein motif:ProSite:PS00868" FT CDS 1474582..1474932 FT /transl_table=11 FT /locus_tag="VSAL_I1356" FT /old_locus_tag="TVS1265" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EKF7" FT /protein_id="CAQ79041.1" FT /translation="MQQNEFETLVKELCQKENLPQVLEALKACEDQDVVEAAESLAGQF FT RLAEVEGEQRIYHVFNDEDENGETQELAEWIMNEGDDVIKFVAWFFYAMFDMKQKETYQ FT AAGKTYQQPKRS" FT CDS 1475219..1475737 FT /transl_table=11 FT /gene="hpc" FT /locus_tag="VSAL_I1357" FT /old_locus_tag="TVS1266" FT /product="secreted protein Hcp-2 (haemolysin co-regulated FT protein)" FT /db_xref="InterPro:IPR008514" FT /db_xref="InterPro:IPR017728" FT /db_xref="UniProtKB/TrEMBL:B6EKF8" FT /protein_id="CAQ79042.1" FT /translation="MPTPAYMSIKGETQGDITKDAYSADSVGNTWQEAHIDEFLVQELD FT HVLTVPRDPQSGQPTGQRVHRPVIVTKQQDRCSPLLFNSLVSGEKLPECSINFYRTSIS FT GKQEHYYTIKLIDALLVDMQTRMAHCQDAATSDRVTEEVLKFTYRAIEVTHETCGTAGD FT DDWRKPREA" FT misc_feature 1475228..1475686 FT /gene="hpc" FT /locus_tag="VSAL_I1357" FT /note="HMMPfam hit to PF05638, Protein of unknown function FT (DUF796), score 4.8e-74" FT /inference="protein motif:HMMPfam:PF05638" FT CDS 1475814..1478078 FT /transl_table=11 FT /locus_tag="VSAL_I1358" FT /old_locus_tag="TVS1267" FT /product="VgrG preotein, VgrG-2" FT /db_xref="InterPro:IPR006531" FT /db_xref="InterPro:IPR006533" FT /db_xref="InterPro:IPR017847" FT /db_xref="UniProtKB/TrEMBL:B6EKF9" FT /protein_id="CAQ79043.1" FT /translation="MANEVEFKFEVLGTNHEFRVESFNVVEEVSQPFKITLSLLSLDPD FT IAFDVLSRKPALLTVLGQGMNAGRLFHGVVNEVRYLGAGRRFSHYQITLVPQLWFLTQR FT QDCRIFQDKSIVDILTEVLDGASVTDYRFELSNTYPNQEYLLQYRETDSHFVQRLLAEH FT GLWYYFEHTTSNHSMVIIDKNDAIPELISTPLNASYIGPLVYQSEGGGNADREHIFELS FT SYNRVRTGHVIQTDYNYDQPRIPQQVQQQGDRDTDLAFFDYPGRYGESVEGQQRSNYLI FT ADHQVENHQIEAESNIMRLTAGYSFDLAKHPRNAINRDYTLTAITHSGYNPQVHEEESS FT GLPTTYQNYFNCIPRDVGYKAPKLAAPVVDGPQTAVVVGPAGEEIYTDPMGRIKVQFHW FT DRYGNNDEHSGCWLRVSQSMAAPTWGAVYLPRIGHEVVVTFLEGDPDRPLVTGAVYNGL FT HTPPYALPEHKTKTVFRTQTHKGEGYNEMSFEDEANQEEVYFHAQKDMRTKVLNNRFRT FT IGNDEELEVGRNQENIINKDRKETIEGHKTSITNQTFSETVEQDVTVKYNANIEKSVAV FT EQTLTIYENRQSTIGKNDELTIKGEQSRITMGASSSDISADDTLTVGQNLTIEVGNNAS FT IKSDADHTIISADEITAQVGSSGFILKNNGTITLYGSDITVDGSGSVALVGGNVAINPG FT AASSQSSSVSANLPRTFSMSPLASTKPVMNSAAYSEMVEDGALMKELCQCGKEGICKLH FT S" FT misc_feature 1476927..1477163 FT /locus_tag="VSAL_I1358" FT /note="HMMPfam hit to PF04524, Protein of unknown function, FT DUF586, score 5e-49" FT /inference="protein motif:HMMPfam:PF04524" FT misc_feature 1477635..1477706 FT /locus_tag="VSAL_I1358" FT /note="HMMPfam hit to PF06715, Gp5 C-terminal repeat (3 FT copies), score 0.021" FT /inference="protein motif:HMMPfam:PF06715" FT CDS 1478060..1478653 FT /transl_table=11 FT /locus_tag="VSAL_I1359" FT /old_locus_tag="TVS1268" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EKG0" FT /protein_id="CAQ79044.1" FT /translation="MQAAQLNNEWRVNSVEVPLFSASESIYAFIEPELWPEWNAELSSH FT IDELDIVNLFNATQFSAIKNGPVVVNLLSSQVLLDVCVKKMSTTHCGALFHTDIATNRS FT ALMYSLRNALVVKKGRGEVFIRYYDSRGLLPLVASMSNEERRDYFSPINKITWFNKAWL FT SVSVFAPIAPLFSDYQWSITEQHFASMQSISTQW" FT CDS 1478669..1480660 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1360" FT /old_locus_tag="TVS1269" FT /product="putative peptidoglycan-binding LysM (fragment)" FT /note="Similar to Vibrio fischeri MJ11 putative FT uncharacterized protein. UniProt:A9ICK7 (EMBL:ABIH01000005) FT (844 aa) fasta scores: E()=2.2e-165,68.9% id in 675 aa. CDS FT is truncated by the insertion of the downstream IS element FT and subsequent recombination events. There is an inframe FT translational stop codon one amino acid residue further FT downstream within the IS element. The extended CDS may FT therefore be expressed and functional" FT /inference="similar to sequence:UniProt:A9ICK7" FT misc_feature 1478681..1478818 FT /locus_tag="VSAL_I1360" FT /note="HMMPfam hit to PF01476, LysM domain, score 2e-08" FT /inference="protein motif:HMMPfam:PF01476" FT misc_feature 1480226..1480261 FT /locus_tag="VSAL_I1360" FT /note="PS00070 Aldehyde dehydrogenases cysteine active FT site." FT /inference="protein motif:ProSite:PS00070" FT repeat_region complement(1480663..1482979) FT /note="VSa2" FT repeat_region complement(1480663..1480686) FT /note="IR of VSa2" FT CDS complement(join(1480679..1481878,1481878..1482168)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1361" FT /old_locus_tag="TVS1270" FT /product="transposase (pseudogene)" FT /note="Similar to Shewanella sp. (strain W3-18-1) FT transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa) FT fasta scores: E()=3e-120, 56.680% id in 494 aa. CDS FT contains a frameshift after codon 97" FT /db_xref="PSEUDO:CAQ79046.1" FT /inference="similar to sequence:UniProt:A1RLT8" FT CDS complement(1482240..1482587) FT /transl_table=11 FT /locus_tag="VSAL_I1362" FT /old_locus_tag="TVS1273b" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ79047.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS complement(1482584..1482898) FT /transl_table=11 FT /locus_tag="VSAL_I1363" FT /old_locus_tag="TVS1273" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ79048.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT repeat_region complement(1482956..1482979) FT /note="IR of VSa2" FT CDS complement(1482981..1485653) FT /transl_table=11 FT /locus_tag="VSAL_I1364" FT /old_locus_tag="TVS1274" FT /product="putative exported nuclease" FT /note="CDS may be truncated by the insertion of the FT downstream IS element and subsequent recombination events" FT /note="Similar to Aeromonas hydrophila Nuclease NucH FT UniProt:Q44070 (1070 aa) fasta scores: E()=1.7e-38,38.610% FT id in 878 aa. CDS is slightly extended at the N-terminus in FT comparison to orthologues. Probably due to the insertion of FT the downstream IS element" FT /db_xref="InterPro:IPR005135" FT /db_xref="UniProtKB/TrEMBL:B6EKG4" FT /inference="similar to sequence:UniProt:Q44070" FT /protein_id="CAQ79049.1" FT /translation="MESSEMKTTQLKTTLAAAVGLALSGSAYADVIISQYVEGGSYNKS FT LEISNTGDSSVSLAGYVLKSKYNGLNEWQKDLDLSAITLDAKSVYVISNSRASDAIKAV FT TNNIESIVNHNGDDTYMLFKDGIEHDRIGVDGDVDWGKDKSFVRSTLSPSTTFDPTMWL FT ELPKDNIDGLGTYQEGITPPLPFACETDSGTTPTFTEINEIQGTGNKSPLITSGFISDD FT EYFVQGIVTARGDSLLKGFYLQGLNNDNDPNSSEGIFVSTGSAPSQEIQPGALVCVKAK FT VQEYYSQTQLKPDTNNVVVQGSQSPVDVTELVINENETLADALERHEGMHVKLTSHSDL FT RITRNFSFDYDSKRNNMVLSHGAPLYKPTQLFAAESTEAIQLAKENAKRQITIESDNKA FT ANGKVPYFPEFASDIDQDGSADSYLRLGARIEGLEGVVAYSYGQYRLVASNTITQENII FT TKALNTDGSTLFNVERTDKPSIDDEDLTITSFNVLNYFTSVSINGDANPTGQNRGATTA FT DEFAIQQAKILSALTAIDADIIGLMEIENNGFGENSAIHDLTAVLNAQFEDKEDHYKYV FT EIDAADKYQGEYLGSDAIMVALLYRPDKVRLEGDARVIKTPEQHVTANTVTRDNNGTIE FT SNPAYDKYQRHSLVQEFIVKEAKEPLTVVVNHLKSKGSECIEQWQNFNEDSEAPDLQGN FT CNRFRVSAVKAIGDELSTVEGDILILGDMNAYGMEDPLLTLTDYSPDKYDRDIFTASYT FT TLGNDTAGNPIPYEETGSQIKKGYGYLNLNTLLHSTETFSYTYSGELGNLDHALANESL FT AKRVTQIEDWHINATESNLFEYSSKYTGDMAKYNDMYSASDHDPVVISLEYAGSLNLLA FT LSSLFGFGYLRRKLNKDNK" FT misc_feature complement(1483071..1484201) FT /locus_tag="VSAL_I1364" FT /note="HMMPfam hit to FT PF03372,Endonuclease/Exonuclease/phosphatase fa, score FT 4.4e-17" FT /inference="protein motif:HMMPfam:PF03372" FT sig_peptide complement(1485567..1485653) FT /locus_tag="VSAL_I1364" FT repeat_region complement(1485887..1486891) FT /note="VSa6" FT repeat_region complement(1485887..1485905) FT /note="IR of VSa6" FT CDS complement(1485914..1486795) FT /transl_table=11 FT /locus_tag="VSAL_I1365" FT /old_locus_tag="TVS1275" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ79050.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature complement(1485974..1486468) FT /locus_tag="VSAL_I1365" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(1486873..1486891) FT /note="IR of VSa6" FT CDS 1487015..1487869 FT /transl_table=11 FT /locus_tag="VSAL_I1366" FT /old_locus_tag="TVS1276" FT /product="ATP-dependent DNA ligase" FT /db_xref="GOA:B6EKG6" FT /db_xref="InterPro:IPR012310" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:B6EKG6" FT /protein_id="CAQ79051.1" FT /translation="MKVSTLSTLIGIGLFSAPMLAFDKSNTVPVSVLLATSYEEGIEVD FT KYWVSEKLDGIRAYWTGSELLTRKGHKIMAPDWFIAPLPKHAIDGELWAGRGGFQQVAS FT TVLDSQPDDELWAEITFMMFDIPHSIGMFPQRYSDLSLLVQGLATPHLKLVEHHPISSE FT DDLLKSLEEMAVNKGEGLMLRKLDSIYRAGRSDDLIKLKKHYDDEAIIVGYTDGKGKFE FT GMVGALILQMPNGQEFKIGSGLSNEVRENPPILGQQVTYRYNGFTDSGIPKFARYIAVR FT EKY" FT sig_peptide 1487015..1487116 FT /locus_tag="VSAL_I1366" FT misc_feature 1487108..1487620 FT /locus_tag="VSAL_I1366" FT /note="HMMPfam hit to PF01068, ATP dependent DNA ligase FT domain, score 1.3e-07" FT /inference="protein motif:HMMPfam:PF01068" FT CDS complement(1487925..1488926) FT /transl_table=11 FT /gene="rbsR" FT /locus_tag="VSAL_I1367" FT /old_locus_tag="TVS1277" FT /product="ribose operon repressor" FT /db_xref="GOA:B6EKG7" FT /db_xref="InterPro:IPR000843" FT /db_xref="InterPro:IPR001761" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:B6EKG7" FT /protein_id="CAQ79052.1" FT /translation="MATIKDVAKHAGVSTSTVSHVLNKTRFVSEDISDRVAFAVKELNY FT APSALARSLKVNHTKTFGMLVTTSTNPFFGEVVKGVERRCYEKGYNLILCNTEGDAERV FT HSSLDTLLQKRVDGLLLMCTEIEHQVLELFSRYQAVPTVVMDWGLIDFPSDKIQDNSHH FT GGYLATKHLIEQGHTDIGCLTGPLNKLQAQQRLSGFVQAMEESGLTINKNWIASGNFEC FT EGGESAFNALHARGALPTALFVCNDMMAMGMINCASKKGISVPNDISVVGYDDINMAKY FT ITPSLTTIHQPKHRLGQQAVDSLLEKIATKSDTNRVIQLEPTLMIRDSVKTI" FT misc_feature complement(1487943..1488752) FT /gene="rbsR" FT /locus_tag="VSAL_I1367" FT /note="HMMPfam hit to PF00532, Periplasmic binding proteins FT and sugar b, score 4.6e-24" FT /inference="protein motif:HMMPfam:PF00532" FT misc_feature complement(1488846..1488923) FT /gene="rbsR" FT /locus_tag="VSAL_I1367" FT /note="HMMPfam hit to PF00356, Bacterial regulatory FT proteins, lacI fami, score 1.2e-11" FT /inference="protein motif:HMMPfam:PF00356" FT misc_feature complement(1488858..1488923) FT /gene="rbsR" FT /locus_tag="VSAL_I1367" FT /note="Predicted helix-turn-helix motif with score FT 2209.000, SD 6.71 at aa 21-42, sequence FT ATIKDVAKHAGVSTSTVSHVLN" FT misc_feature complement(1488861..1488917) FT /gene="rbsR" FT /locus_tag="VSAL_I1367" FT /note="PS00356 Bacterial regulatory proteins, lacI family FT signature." FT /inference="protein motif:ProSite:PS00356" FT CDS complement(1489002..1489919) FT /transl_table=11 FT /gene="rbsK" FT /locus_tag="VSAL_I1368" FT /old_locus_tag="TVS1278" FT /product="ribokinase" FT /EC_number="2.7.1.15" FT /db_xref="GOA:B6EKG8" FT /db_xref="InterPro:IPR002139" FT /db_xref="InterPro:IPR002173" FT /db_xref="InterPro:IPR011611" FT /db_xref="InterPro:IPR011877" FT /db_xref="UniProtKB/TrEMBL:B6EKG8" FT /protein_id="CAQ79053.1" FT /translation="MNKLVVLGSVNADHVLQVASFPRPGETLHGHSYSVIPGGKGANQA FT VAAARLGADVAFIASVGDDNFGQQMIEAFKFDGINTEAVMIEENTPTGIAMIQVAATGE FT NSICISAEANARLTAERIAPHHGLIEAADTLLMQLETPIETIEKAAQIAKAAGTKVVLN FT PAPAQQLSDDLLQLVDMITPNETEAELLTGIEVTDMASAQRAADALHAKGIETVMITLG FT SKGVWISKNGKGRQVEGFRVQATDTTGAGDTFNGAFLTGLQSGRKLDDAIKFAHAAAAI FT SVTRMGAQTSIPSITEVERFLLEH" FT misc_feature complement(1489035..1489919) FT /gene="rbsK" FT /locus_tag="VSAL_I1368" FT /note="HMMPfam hit to PF00294, pfkB family carbohydrate FT kinase, score 2.5e-89" FT /inference="protein motif:HMMPfam:PF00294" FT misc_feature complement(1489047..1489598) FT /gene="rbsK" FT /locus_tag="VSAL_I1368" FT /note="HMMPfam hit to PF08543, Phosphomethylpyrimidine FT kinase, score 4.3e-06" FT /inference="protein motif:HMMPfam:PF08543" FT misc_feature complement(1489143..1489184) FT /gene="rbsK" FT /locus_tag="VSAL_I1368" FT /note="PS00584 pfkB family of carbohydrate kinases FT signature 2." FT /inference="protein motif:ProSite:PS00584" FT misc_feature complement(1489734..1489808) FT /gene="rbsK" FT /locus_tag="VSAL_I1368" FT /note="PS00583 pfkB family of carbohydrate kinases FT signature 1." FT /inference="protein motif:ProSite:PS00583" FT CDS complement(1490100..1490978) FT /transl_table=11 FT /gene="rbsB" FT /locus_tag="VSAL_I1369" FT /old_locus_tag="TVS1279" FT /product="D-ribose-binding periplasmic protein precursor FT RbsB" FT /EC_number="3.6.3.17" FT /db_xref="GOA:B6EKG9" FT /db_xref="InterPro:IPR001761" FT /db_xref="UniProtKB/TrEMBL:B6EKG9" FT /protein_id="CAQ79054.1" FT /translation="MKKLATLISAALLSASFSSTASAQDTMAMVVSTLNNPFFVTMKEG FT AEAKAKELGYKLIVLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRMANRS FT GIPVLTLDRGASRGDVVSHIASDNVAGGEMAGKYIMEKVGQKARVIQLEGIAGTSAARE FT RGEGFMKTVNSGDLVLLGSQPADFDRTKGLNVMENMLAANPDVQAVFAQNDEMALGALR FT AVQASGKDVLIVGFDGTEDGIAAVNRGILGATIAQQPDLIGALGVETADKVLKGETVAK FT YIPVELKVITK" FT misc_feature complement(1490106..1490909) FT /gene="rbsB" FT /locus_tag="VSAL_I1369" FT /note="HMMPfam hit to PF00532, Periplasmic binding proteins FT and sugar b, score 3.5e-12" FT /inference="protein motif:HMMPfam:PF00532" FT sig_peptide complement(1490910..1490978) FT /gene="rbsB" FT /locus_tag="VSAL_I1369" FT CDS complement(1491115..1492086) FT /transl_table=11 FT /gene="rbsC" FT /locus_tag="VSAL_I1370" FT /old_locus_tag="TVS1280" FT /product="ribose transport system permease protein RbsC" FT /EC_number="3.6.3.17" FT /db_xref="GOA:B6EKH0" FT /db_xref="InterPro:IPR001851" FT /db_xref="UniProtKB/TrEMBL:B6EKH0" FT /protein_id="CAQ79055.1" FT /translation="MTPSESQKKKGGMFSKEWLIEQKSLIALLLLIVVVSFLNDNFFTV FT DNILNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLALCGAFAATMIGLEIHPIIAVP FT TSLLAGAILGAISGIIIAKGKVQAFIATLVTMTLLRGVTMVYTEGRPISTGFTDVADSF FT SWFGTGYALGIPVPIWLMVIVFASVWYLLNHTRFGRYVYALGGNESATRLSGINVDRVK FT IGVYAICGLLAALAGLIVTSRLSSAQPTAGMGYELDAIAAVVLGGTSLAGGKGRIMGTL FT VGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVDNKNK" FT misc_feature complement(1491139..1491948) FT /gene="rbsC" FT /locus_tag="VSAL_I1370" FT /note="HMMPfam hit to PF02653, Branched-chain amino acid FT transport syst, score 1.3e-76" FT /inference="protein motif:HMMPfam:PF02653" FT misc_feature complement(order(1491196..1491264,1491352..1491420, FT 1491511..1491579,1491637..1491705,1491724..1491792, FT 1491850..1491918,1491976..1492035)) FT /gene="rbsC" FT /locus_tag="VSAL_I1370" FT CDS complement(1492098..1493612) FT /transl_table=11 FT /gene="rbsA" FT /locus_tag="VSAL_I1371" FT /old_locus_tag="TVS1281" FT /product="ribose transport ATP-binding protein RbsA" FT /EC_number="3.6.3.17" FT /db_xref="GOA:B6EKH1" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR015861" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EKH1" FT /protein_id="CAQ79056.1" FT /translation="MNQPILELKGIEKAFPGVKALDGACLNVYPGKVMALMGENGAGKS FT TLMKSLTGIYAMDAGEIRYEGKAVNFNGPKHSQESGISIIHQELNLIPELTIAENIFLG FT REKTNVFGGIKWAEMYSDADALLNRLNVKHHSRQLLGELSLGEQQMVEIAKALSFKSKV FT IIMDEPTDALTDTETESLFKVINELRDEGCGIVYISHRLKEIFEICDDITVLRDGKFIG FT ERVVAEIDEDTLIEMMVGRRLDEQYPRIDATHGDKSLELFDVSGPGVENVSFSLDRGEI FT LGISGLMGAGRTELMKIIYGAAPMTCGAIKLNNKMINPISPRDGLANGIAYISEDRKGD FT GLVLGLSVKENMSLCSLDQLSKGIQLDHQAEVTAVEDFIRLFNIKTPSRDQIIGNLSGG FT NQQKVAIAKGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILASSEMPEV FT LGMSDRILVMHEGHISGEFMAKDADQEKLLACAVGKTVQQNVEVTA" FT misc_feature complement(1492200..1492778) FT /gene="rbsA" FT /locus_tag="VSAL_I1371" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 3.2e-27" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(1492383..1492427) FT /gene="rbsA" FT /locus_tag="VSAL_I1371" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(1492959..1493522) FT /gene="rbsA" FT /locus_tag="VSAL_I1371" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 2.7e-51" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(1493142..1493186) FT /gene="rbsA" FT /locus_tag="VSAL_I1371" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(1493478..1493501) FT /gene="rbsA" FT /locus_tag="VSAL_I1371" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1493673..1494092) FT /transl_table=11 FT /gene="rbsD" FT /locus_tag="VSAL_I1372" FT /old_locus_tag="TVS1282" FT /product="high affinity ribose transport protein RbsD" FT /db_xref="GOA:B6EKH2" FT /db_xref="InterPro:IPR007721" FT /db_xref="InterPro:IPR023064" FT /db_xref="InterPro:IPR023750" FT /db_xref="UniProtKB/Swiss-Prot:B6EKH2" FT /protein_id="CAQ79057.1" FT /translation="MKKNTLLNAELSYIIASLGHTDEITICDAGLPIPDRSQRIDLALI FT QGIPTFIDTVKATLAEMQIEGVIVAQEFKTVSPQLHDELMTLVQIEEELRGKPITISYI FT PHEEFKSHSHQSKAIVRTGECTPYANVIFQSGVVF" FT misc_feature complement(1493676..1494092) FT /gene="rbsD" FT /locus_tag="VSAL_I1372" FT /note="HMMPfam hit to PF05025, RbsD / FucU transport FT protein family, score 2.8e-73" FT /inference="protein motif:HMMPfam:PF05025" FT CDS 1494476..1494637 FT /transl_table=11 FT /locus_tag="VSAL_I1373" FT /old_locus_tag="TVS1283" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EKH3" FT /protein_id="CAQ79058.1" FT /translation="MRKRYTTEGDTTSKKEKEAYPILALCKNCVGSYTVINEGERTHVA FT CAKCGADD" FT CDS 1494709..1495161 FT /transl_table=11 FT /locus_tag="VSAL_I1374" FT /old_locus_tag="TVS1284" FT /product="membrane protein" FT /db_xref="InterPro:IPR005185" FT /db_xref="UniProtKB/TrEMBL:B6EKH4" FT /protein_id="CAQ79059.1" FT /translation="MSAIGNLIWFLFGGVFMGLAWCFFGLIAFISIIGIPWGRACFVIA FT GFSFFPFGKEAIRRDDLTKSEDIGTGSLGFLGNVLWFIFAGFWLAIGHVISAIACFVTI FT IGIPFAIQHLKLAAISIAPIGQTIVDKEVASVVRNANAKIEADKWK" FT misc_feature 1494715..1494885 FT /locus_tag="VSAL_I1374" FT /note="HMMPfam hit to PF03733, Domain of unknown function FT (DUF307), score 7.6e-20" FT /inference="protein motif:HMMPfam:PF03733" FT misc_feature order(1494727..1494795,1494805..1494864,1494910..1494963, FT 1494973..1495041) FT /locus_tag="VSAL_I1374" FT misc_feature 1494931..1495101 FT /locus_tag="VSAL_I1374" FT /note="HMMPfam hit to PF03733, Domain of unknown function FT (DUF307), score 1.1e-27" FT /inference="protein motif:HMMPfam:PF03733" FT CDS 1495390..1495632 FT /transl_table=11 FT /locus_tag="VSAL_I1375" FT /old_locus_tag="TVS1285" FT /product="membrane protein" FT /note="Expression may be regulated by Fur" FT /db_xref="UniProtKB/TrEMBL:B6EKH5" FT /protein_id="CAQ79060.1" FT /translation="MAPMAISNYLGWLIILLGSYPFLFVAINICTYEPMRRKVNIWFNI FT LCMLLVVFLLVMHMNIDIVYGKELLDAWYSNNPRK" FT misc_feature order(1495417..1495485,1495504..1495572) FT /locus_tag="VSAL_I1375" FT CDS 1495877..1496020 FT /transl_table=11 FT /locus_tag="VSAL_I1376" FT /old_locus_tag="TVS1286" FT /product="hypothetical protein, putative gene remnant" FT /note="Similar to C-terminal part of Vibrio fischeri FT Ferrichrome-binding protein. UniProt:Q5E573 (178 aa) blastp FT scores: E()=8e-04" FT /db_xref="UniProtKB/TrEMBL:B6EKH6" FT /inference="similar to sequence:UniProt:Q5E573" FT /protein_id="CAQ79061.1" FT /translation="MTKMISESHLFTVRLVDPMSFIDFLFLHKSDSGIVYLGYLLGEIF FT WW" FT CDS 1496286..1496651 FT /transl_table=11 FT /locus_tag="VSAL_I1377" FT /old_locus_tag="TVS1287" FT /product="putative lipoprotein" FT /db_xref="UniProtKB/TrEMBL:B6EKH7" FT /protein_id="CAQ79062.1" FT /translation="MKTLMVSTIIASTMLLTGCVTFPTQESEKVEVVWDEVDAVKDCER FT MGIVFGSEGHFYDYWLHADKDMVWGSLNQMRIKSAKLGADTLYLYQPLSFSSSVTMFGN FT AYLCGKPEKNKTAVLPN" FT sig_peptide 1496286..1496369 FT /locus_tag="VSAL_I1377" FT misc_feature 1496310..1496342 FT /locus_tag="VSAL_I1377" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT repeat_region complement(1496773..1497894) FT /note="VSa8" FT repeat_region complement(1496773..1496801) FT /note="IR of VSa8" FT CDS complement(1496780..1497346) FT /transl_table=11 FT /locus_tag="VSAL_I1378" FT /old_locus_tag="TVS1288" FT /product="transposase" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:B6EGL7" FT /protein_id="CAQ79063.1" FT /translation="MKFNNFSNILNSLIEMERTNKCELFYFDESGFSQKSNLPYCWGPI FT GVQSLRPAHSHSKRLNVLGFLSRQGKLSFQTTEGRVTTDTVIDAFEHFINARKNDKPCF FT IILDNASFHRSAKFKQKLHEWLMNDVLVCYLPPYSPELNIIEILWKKVKYEWLPCEAFK FT TFEDLSINIKNILNYYGEKFTITFA" FT CDS complement(1497364..1497786) FT /transl_table=11 FT /locus_tag="VSAL_I1379" FT /old_locus_tag="TVS1289" FT /product="transposase" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:B6EGL6" FT /protein_id="CAQ79064.1" FT /translation="MKAVNPLTDNEKITLKEAIANHPKNRVRIRAHAIILSDKGYSILA FT LTDILDAKFETISSWIDHWEACGMLGLYDAVRIGRKPIYTEAEVYRLKSLVDEEPHQLK FT RAQAILEEETGKKSSLDTIKRNIKKVITVTKEPDTH" FT repeat_region complement(1497866..1497894) FT /note="IR of VSa8" FT CDS 1497895..1498407 FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1380" FT /old_locus_tag="TVS1290" FT /product="hypothetical protein (fragment)" FT /note="Similar to N-terminal part of Vibrio fischeri FT Hypothetical protein UniProt:Q5DYX7 (205 aa) fasta scores: FT E()=1.6e-51, 79.245% id in 159 aa. CDS is truncated by the FT insertion of the upstream IS element and subsequent FT recombination events" FT /inference="similar to sequence:UniProt:Q5DYX7" FT CDS 1498417..1499034 FT /transl_table=11 FT /locus_tag="VSAL_I1381" FT /old_locus_tag="TVS1291" FT /product="putative lipoprotein" FT /db_xref="InterPro:IPR021326" FT /db_xref="UniProtKB/TrEMBL:B6EKI0" FT /protein_id="CAQ79066.1" FT /translation="MIKIILSIFCLLLSGCGSSLFEKQKQLDEWTISTMSPKYYTVRGD FT TLLIVGEKKSGGWKGMIGKATMESLDPLNWEGLERFHSGYSIKSTELPGLFYIRWHSLS FT NKKTYNKSVRVSEEIRKKMSEYHDMRCGFNNGLYPYKDNILLGLAPDGMISVFLNGTCF FT KNELQFKVQAIEYKVSDDFIYPELSEEAQAYVDEHGVPVGIW" FT sig_peptide 1498417..1498488 FT /locus_tag="VSAL_I1381" FT misc_feature 1498432..1498464 FT /locus_tag="VSAL_I1381" FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT /inference="protein motif:ProSite:PS00013" FT CDS complement(1499112..1500494) FT /transl_table=11 FT /gene="norM" FT /locus_tag="VSAL_I1382" FT /old_locus_tag="TVS1292" FT /product="multidrug resistance protein NorM (sodium/drug FT antiporter)" FT /db_xref="GOA:B6EKI1" FT /db_xref="InterPro:IPR002528" FT /db_xref="UniProtKB/TrEMBL:B6EKI1" FT /protein_id="CAQ79067.1" FT /translation="MHRYQKEIVRLIKLSTPVLIASVAQTGMGFVDTVMAGGVSATDMA FT AVAIAASVWLPAILFGVGLLMALVPVVAQLNGSGKSKKIPFEIHQGIYLALLISIPIMV FT ILYNAGHIIALMNVEPELYEKTKGYLHAVLWAAPAFLLFQALRSFCEGLSLTIPAMVIG FT FIGLAANIPLNWMFVYGKLGAPPLGGVGCGIATAIVYWLMFVAMIIYTFVAPKLRRVNL FT YENWNKPQLKEIYRLFKLGLPVALSIFFEVTLFAAVALLVSPLGSTVVAAHQVAINFSS FT LIFMVPMSIAIAVSIRVGQKLGENDLEGARIASYCGLAFGLLMAFCTAILTVLFRESIA FT YLYTDNVEVVHLAVSLMLLAAVYQCTDAVQVVAAGALRGYKDMTAIFKRTFISYWIVGL FT PAGYILGMTDWIVEPMGVYGFWIGFIGGLSTAAILLSLRLRWLQKNPQHINMEVDELQV FT MH" FT misc_feature complement(order(1499178..1499246,1499256..1499324, FT 1499382..1499450,1499493..1499561,1499598..1499666, FT 1499709..1499777,1499856..1499915,1499958..1500026, FT 1500045..1500113,1500156..1500224,1500282..1500350, FT 1500393..1500461)) FT /gene="norM" FT /locus_tag="VSAL_I1382" FT misc_feature complement(1499283..1499768) FT /gene="norM" FT /locus_tag="VSAL_I1382" FT /note="HMMPfam hit to PF01554, MatE, score 2.1e-44" FT /inference="protein motif:HMMPfam:PF01554" FT misc_feature complement(1499967..1500446) FT /gene="norM" FT /locus_tag="VSAL_I1382" FT /note="HMMPfam hit to PF01554, MatE, score 1e-42" FT /inference="protein motif:HMMPfam:PF01554" FT sig_peptide complement(1500345..1500494) FT /gene="norM" FT /locus_tag="VSAL_I1382" FT CDS 1500753..1501364 FT /transl_table=11 FT /gene="ribE" FT /locus_tag="VSAL_I1383" FT /old_locus_tag="TVS1293" FT /product="riboflavin synthase alpha chain" FT /EC_number="2.5.1.9" FT /db_xref="GOA:B6EKI2" FT /db_xref="InterPro:IPR001783" FT /db_xref="InterPro:IPR017938" FT /db_xref="InterPro:IPR023366" FT /db_xref="UniProtKB/TrEMBL:B6EKI2" FT /protein_id="CAQ79068.1" FT /translation="MFTGIVATTAKVIDIIKKENFQTHIVEILEPYNHELEIGASVAHN FT GCCLTVTKIDGNKVWFDLIEETLRLTNLGFLSIGQRVNIERAARFGDEIGGHSMSGHIV FT DIMIVREVIKTPANCKIWFDVPPTWLKYVLHKGYVGVDGISLTIGDVDAKGFNVNLIPE FT TLERTNLSERIVGDKINLEIDPQTQAIVDTIERVLANQNN" FT misc_feature 1500759..1501013 FT /gene="ribE" FT /locus_tag="VSAL_I1383" FT /note="HMMPfam hit to PF00677, Lumazine binding FT domain,score 1e-33" FT /inference="protein motif:HMMPfam:PF00677" FT misc_feature 1500969..1501007 FT /gene="ribE" FT /locus_tag="VSAL_I1383" FT /note="PS00693 Riboflavin synthase alpha chain family FT signature." FT /inference="protein motif:ProSite:PS00693" FT misc_feature 1501050..1501304 FT /gene="ribE" FT /locus_tag="VSAL_I1383" FT /note="HMMPfam hit to PF00677, Lumazine binding FT domain,score 4.1e-23" FT /inference="protein motif:HMMPfam:PF00677" FT CDS complement(1501380..1501583) FT /transl_table=11 FT /locus_tag="VSAL_I1384" FT /old_locus_tag="TVS1294" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EKI3" FT /protein_id="CAQ79069.1" FT /translation="MNNYITKNIECPNCQHSIDMVIGQNQRSQQVYDDCPSCHRAIEMK FT MTVNPHNSTINLSIDSNEDGLF" FT CDS complement(1501813..1502679) FT /transl_table=11 FT /locus_tag="VSAL_I1385" FT /old_locus_tag="TVS1295" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EKI4" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR016477" FT /db_xref="UniProtKB/TrEMBL:B6EKI4" FT /protein_id="CAQ79070.1" FT /translation="MWQAIAQQISDVTKRPFTISDRETINGGEINDCYMISNGSERYFV FT KVNDRAELPIFETELESLTQLDKSDHIFVPKPIHIGVTKTHSFLVLNYLPTKVMDKKAS FT YDLGISLAHHHLWGDQLEYGFDGDNYLGSVLQVNTWHRRWDCFFAEQRIGWQLQLLHEK FT GMFLGDIDTLVNNSKKILHNHNPKPSLLHGDFWHGNVSLSVKGPIVYDPACYWGDPECD FT LAMATLFGGFQDSFFEGYLSIRNIEEGFETRQNLYNLYHVLNHCNMFGGEYLNHAQQLI FT DKLNLTH" FT misc_feature complement(1501816..1502679) FT /locus_tag="VSAL_I1385" FT /note="HMMPfam hit to PF03881, Fructosamine kinase, score FT 2.1e-140" FT /inference="protein motif:HMMPfam:PF03881" FT misc_feature complement(1501912..1502619) FT /locus_tag="VSAL_I1385" FT /note="HMMPfam hit to PF01636, Phosphotransferase enzyme FT family, score 2.4e-25" FT /inference="protein motif:HMMPfam:PF01636" FT CDS 1502924..1503259 FT /transl_table=11 FT /locus_tag="VSAL_I1386" FT /old_locus_tag="TVS1296" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR020979" FT /db_xref="UniProtKB/TrEMBL:B6EKI5" FT /protein_id="CAQ79071.1" FT /translation="MVINSDGYHALIEYLTEHLAIFANQQGDTGEETVEDIVTDLVASN FT LMAVFQQNPELDPDVRFTLMREADAVVADLGEVLASAWVQKATNEQVMFLDDYIGLIKN FT LFDSAFK" FT CDS complement(1503335..1503823) FT /transl_table=11 FT /locus_tag="VSAL_I1387" FT /old_locus_tag="TVS1297" FT /product="putative lipoprotein" FT /note="Similar to Escherichia coli Lipoprotein Spr FT UniProt:P0AFV4 (188 aa) fasta scores: E()=4.6e-19, 50.000% FT id in 112 aa" FT /db_xref="InterPro:IPR000064" FT /db_xref="UniProtKB/TrEMBL:B6EKI6" FT /inference="similar to sequence:UniProt:P0AFV4" FT /protein_id="CAQ79072.1" FT /translation="MTRNISLIFGFILLSSIAGCSSTPPSQQLSKQDIEVKYPQLKQSD FT GYQDYFREWQGVPYKYGGISKDGVDCSAFTQDALQTLHQLSLPRTTEYQISTGQKIALV FT NAKKGDLIFFKTGIKVRHVGVYIGNREFMHASTSKGVIISSLDNPYWKKAYWQARRVL" FT misc_feature complement(1503344..1503658) FT /locus_tag="VSAL_I1387" FT /note="HMMPfam hit to PF00877, NlpC/P60 family, score FT 1.1e-42" FT /inference="protein motif:HMMPfam:PF00877" FT sig_peptide complement(1503740..1503823) FT /locus_tag="VSAL_I1387" FT CDS 1504126..1505718 FT /transl_table=11 FT /locus_tag="VSAL_I1388" FT /old_locus_tag="TVS1298" FT /product="putative ion transporter" FT /db_xref="InterPro:IPR004697" FT /db_xref="UniProtKB/TrEMBL:B6EKQ0" FT /protein_id="CAQ79073.1" FT /translation="MSSSASQQKNQQQPKRPLFTRFLDSVEYLGNLLPHPITLFAIFCV FT AILVLSGIAGYFEVSVIDPRPEGEKGRAADGMIHGISLFNAEGLQLIVTNLVKNFVGFA FT PLGTVLVAMLGVAIAEHSGMLSAAMRGMVMGASKRMVTVTVVFAGIISNTASELGYVVL FT IPLAAMLFHSLGRHPLAGLAAAFAGVSGGYSANLLIGTVDPLLSGITETAAQMIDPTYT FT VGPEANWYFMFVSTFFIAITGAFVTEKIIEPKLGKYNDEEAAEDLSNDKMGKLTAVEKK FT GLKFAGVAVLIVSALLAWTIVPEDGVLRSATGTVSGSPFLKSIVAFIFVFFAVPGFVYG FT KIVGTMKNDRDVINAMATSMSSMGMYIVLVFFAAQFVAFFKWTNFGQVIAVGGASFLQD FT VGLTGPMLFFAFILMCGFINLMIGSASAQWAVTAPIFVPMLMLVGYAPETIQAAYRIGD FT STTNIITPMMSYFGLILAVATRYMKNLGIGTLIATMLPYSICFMFGWSILFYLWVFVFG FT LPVGPGAATFYTP" FT misc_feature 1504186..1505709 FT /locus_tag="VSAL_I1388" FT /note="HMMPfam hit to PF03806, AbgT putative transporter FT family, score 0" FT /inference="protein motif:HMMPfam:PF03806" FT misc_feature order(1504234..1504302,1504423..1504491,1504549..1504617, FT 1504654..1504722,1504810..1504866,1504966..1505034, FT 1505092..1505160,1505197..1505265,1505323..1505391, FT 1505410..1505463,1505491..1505559,1505620..1505688) FT /locus_tag="VSAL_I1388" FT misc_feature 1505248..1505277 FT /locus_tag="VSAL_I1388" FT /note="PS00019 Actinin-type actin-binding domain signature FT 1." FT /inference="protein motif:ProSite:PS00019" FT CDS 1505861..1506550 FT /transl_table=11 FT /gene="rsuA" FT /locus_tag="VSAL_I1389" FT /old_locus_tag="TVS1299" FT /product="ribosomal small subunit pseudouridine synthase A" FT /EC_number="5.4.99.-" FT /db_xref="GOA:B6EKQ1" FT /db_xref="InterPro:IPR000748" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR006145" FT /db_xref="InterPro:IPR018496" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/TrEMBL:B6EKQ1" FT /protein_id="CAQ79074.1" FT /translation="MRLDKFVCKSTTLTKNEALECIAEGRVKVNAKIVTVESTQVHENN FT HVTLNGDLLTARPFRYLLMNKPANTICSNIDEAYPSLFNYIKEGNNSELHIAGRLDSDT FT TGLVLITDDGRWSYNIITPSKKCEKVYRVGLRNIITSEAIIKIELGVQLQGEVELTRPA FT KLKIITEREVLLTIIEGKFHQVKRMFSAVGNKVILLHREQFGEISLDVNEGEWRYLTDY FT EVNSFEY" FT misc_feature 1505861..1506001 FT /gene="rsuA" FT /locus_tag="VSAL_I1389" FT /note="HMMPfam hit to PF01479, S4 domain, score 4.1e-06" FT /inference="protein motif:HMMPfam:PF01479" FT misc_feature 1506038..1506433 FT /gene="rsuA" FT /locus_tag="VSAL_I1389" FT /note="HMMPfam hit to PF00849, RNA pseudouridylate FT synthase, score 6.1e-10" FT /inference="protein motif:HMMPfam:PF00849" FT misc_feature 1506152..1506196 FT /gene="rsuA" FT /locus_tag="VSAL_I1389" FT /note="PS01149 Rsu family of pseudouridine synthase FT signature." FT /inference="protein motif:ProSite:PS01149" FT CDS complement(1506586..1507389) FT /transl_table=11 FT /locus_tag="VSAL_I1390" FT /old_locus_tag="TVS1300" FT /product="membrane protein" FT /db_xref="GOA:B6EKQ2" FT /db_xref="InterPro:IPR006694" FT /db_xref="UniProtKB/TrEMBL:B6EKQ2" FT /protein_id="CAQ79075.1" FT /translation="MENSWIEQSDTIRLGCFVAAFILFALVEYKWPRKKLTQKKSLRWV FT NNLGLIVFNSIVLRLALPLLAIDAAYIAQQENFGVFNYLGTPYFLTFLLSILLLDWIIY FT WQHRAFHRVPSLWRLHRMHHSDQDIDLTTGTRFHPVEIILSMLIKIAAIGILGIPVEAV FT IVFEIILNVSAMFNHSNLHIPRWLDRYIRTLLITPDVHRVHHSIHVTEMNNNYGFFLSI FT WDRIGKTYLVRPRDGHEDMKIGTALFRSEKEQRLDKMLTQPFRKK" FT misc_feature complement(order(1506895..1506963,1507075..1507143, FT 1507180..1507248,1507309..1507362)) FT /locus_tag="VSAL_I1390" FT CDS 1507476..1508219 FT /transl_table=11 FT /locus_tag="VSAL_I1391" FT /old_locus_tag="TVS1301" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR005636" FT /db_xref="UniProtKB/TrEMBL:B6EKQ3" FT /protein_id="CAQ79076.1" FT /translation="MRIHSVHQLHKERLARSTKPFNARGGNVDRCEFCQVRKDYCICEY FT QPQAASKAAFLLIMFDTEVLKPSNTGKLIADVIPDTHAYLWSRTEPNPELLALLKDESY FT QPFVIFPEELIENKSLVRNDIVVEEGKTPLFILLDGSWREAGRMYRKSVYLHHLPVLSF FT NREHLSNYIMRKATKDHQLATAEVASLVLDLLGEKENAKHLECWFDLFREHYLYSKRPV FT KGAERGMGLKRLIEFRTELKVNNLI" FT misc_feature 1507554..1508135 FT /locus_tag="VSAL_I1391" FT /note="HMMPfam hit to PF03942, DTW domain, score 5.9e-56" FT /inference="protein motif:HMMPfam:PF03942" FT CDS 1508346..1509254 FT /transl_table=11 FT /locus_tag="VSAL_I1392" FT /old_locus_tag="TVS1302" FT /product="putative outer membrane protein" FT /db_xref="GOA:B6EKQ4" FT /db_xref="InterPro:IPR000600" FT /db_xref="InterPro:IPR023505" FT /db_xref="UniProtKB/Swiss-Prot:B6EKQ4" FT /experiment="The expressed protein is found to be FT associated with the outer membrane in Aliivibrio FT salmonicida" FT /protein_id="CAQ79077.1" FT /translation="MYYGFDVGGTKIEFGAFNEKLERVATERIPTQTEDYSLLVNDIAS FT LIAKYDAEFGVEGKVGLGIPGMEDAETGALLTSNVPAAKGQFLRKDLEAKIGRSVKIDN FT DANCFALSEAWDEELKDSPSVLGLILGTGFGGGLVFDGKVFSGYSHVAGELGHSRLPID FT AWFHLGEKAPLLECGCGNKGCIDNYLSGRGFELLYAHYYGQEKKAIDIIKANEAGDADA FT VEHVDRFMELLAICFANLFTCFDPHVVALGGGLSNFALIYDELPKRLPKHLLSVARVPR FT IIKAKHGDSGGVRGAAFLNIK" FT misc_feature 1508355..1508927 FT /locus_tag="VSAL_I1392" FT /note="HMMPfam hit to PF00480, ROK family, score 2.8e-47" FT /inference="protein motif:HMMPfam:PF00480" FT misc_feature 1508733..1508816 FT /locus_tag="VSAL_I1392" FT /note="PS01125 ROK family signature." FT /inference="protein motif:ProSite:PS01125" FT CDS complement(1509379..1509711) FT /transl_table=11 FT /locus_tag="VSAL_I1393" FT /old_locus_tag="TVS1303" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR004027" FT /db_xref="UniProtKB/TrEMBL:B6EKQ5" FT /protein_id="CAQ79078.1" FT /translation="MSKMFFKGRIETRQNHVKSGFNTKRDVKLGTEEAPLTLVVQTEER FT KVEIEAQITEHDLFANIEVNAEKEENILELEGVLNKPKTTRFEKTPNRNEACPCGSGQK FT YKKCCA" FT misc_feature complement(1509382..1509435) FT /locus_tag="VSAL_I1393" FT /note="HMMPfam hit to PF02810, SEC-C motif, score 0.00039" FT /inference="protein motif:HMMPfam:PF02810" FT CDS 1510487..1512079 FT /transl_table=11 FT /locus_tag="VSAL_I1394" FT /old_locus_tag="TVS1304" FT /product="hypothetical protein" FT /db_xref="GOA:B6EKQ6" FT /db_xref="InterPro:IPR006076" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EKQ6" FT /protein_id="CAQ79079.1" FT /translation="MIRICYSCHFWLILLEVINMINSNKEKALYQPHITVIGAGISGLT FT IAHQCIKQGYRVSVYEKASFAGGKCIGHVIDGKVHELTHRQIFAKNKNLLSLLKEIPTK FT TGTCLDYIHSQKKVQFHWGTKNKTMQFQRSYFSIIEKLVDDAKSAYSMIYSKVPLIDIY FT WFKKQALLTKIDDSYTHIPISEYFQYKERPKLANFLRPMLTAWIGATDDTSAISVLDLL FT RNKEGQLHPDSPDGYSLGFSLPISQSVIEPWYEYLKASSVTFHFNNDVAHIIGHKDIVN FT QASIWLINGQELKADYFVLAIPAHIIQQKISNQGSENLDLHRVFSHGFQLHFDKLPQAL FT NDKTVGIVLDSPWGLSYCITYPECENNKNQLVCLSITATNMDTAHGCVYDKPLFLCSKT FT ETLIELLTQLMGNTQLLDESGFVSFHIGPGARIVSLLDAEHLDYADWHKGNMFFDENGI FT MSCWVIQHSLAHPTYKNKMAIRSDEFDNLFFTGEYIVDTEQTWRVPATLERTIETAILC FT NERLTACIEKTES" FT misc_feature 1510715..1510744 FT /locus_tag="VSAL_I1394" FT /note="PS00142 Neutral zinc metallopeptidases,zinc-binding FT region signature." FT /inference="protein motif:ProSite:PS00142" FT CDS 1512083..1512886 FT /transl_table=11 FT /locus_tag="VSAL_I1395" FT /old_locus_tag="TVS1305" FT /product="membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EKQ7" FT /protein_id="CAQ79080.1" FT /translation="MDQTSRRHLLTSGLFLSLCFIYARGFYQLALSSITMAVLITLVLP FT VLFSPLIKRVENHQEIKRILVLESGFNFICILALTDFIYKGAIDTLFVVFFIIQAGGFI FT TVQIKKKAFLSLPSSLCLSVAITIWIINGNQTELLGDGKLLIFGSAVPWQLKGIYFAWL FT AQVLLNEYRHILPKLTILLVHIASLSVALMAEDFFHARIVTASHLLFLSLCFDLKLLSW FT GGEDFAISQRINVMMLNINIANLFSRVCSLICLILVIHLILITLN" FT sig_peptide 1512083..1512193 FT /locus_tag="VSAL_I1395" FT misc_feature order(1512107..1512160,1512170..1512238,1512272..1512331, FT 1512341..1512400,1512419..1512475,1512518..1512586, FT 1512599..1512658,1512686..1512754,1512812..1512880) FT /locus_tag="VSAL_I1395" FT CDS 1513088..1513318 FT /transl_table=11 FT /locus_tag="VSAL_I1396" FT /old_locus_tag="TVS1306" FT /product="putative DNA-damage-inducible protein I (DinI)" FT /db_xref="InterPro:IPR010391" FT /db_xref="UniProtKB/TrEMBL:B6EKQ8" FT /protein_id="CAQ79081.1" FT /translation="MRIEMMITAAQLPKDGLTLIHQEMERRVWEYYPNARIRIRKGANN FT HLEIYAPKDDKKAANIIVEQMFNEAEEWLYA" FT misc_feature 1513121..1513312 FT /locus_tag="VSAL_I1396" FT /note="HMMPfam hit to PF06183, DinI-like family, score FT 3.4e-13" FT /inference="protein motif:HMMPfam:PF06183" FT CDS complement(1513835..1515616) FT /transl_table=11 FT /gene="moeA" FT /locus_tag="VSAL_I1397" FT /old_locus_tag="TVS1307" FT /product="molybdopterin biosynthesis protein MoeA" FT /note="CDS is extended with approximately 180 aa residues FT at the N-terminus in comparison to the Escherichia coli FT orthologue" FT /db_xref="GOA:B6EKQ9" FT /db_xref="InterPro:IPR001453" FT /db_xref="InterPro:IPR004435" FT /db_xref="InterPro:IPR005110" FT /db_xref="InterPro:IPR005111" FT /db_xref="InterPro:IPR008284" FT /db_xref="InterPro:IPR012182" FT /db_xref="InterPro:IPR020817" FT /db_xref="UniProtKB/TrEMBL:B6EKQ9" FT /protein_id="CAQ79082.1" FT /translation="MSLTTASIPLLGFVAYSGTGKTTLLEKLLPKLNEMGLKVAVIKHA FT HHNFDIDQEGKDSYRLRKAGASQMLISSRFRHALITETPDEETSCQQLINKLDQTQLDL FT ILIEGFKQLPYTKIELHRDDVGKPWIFPEDNNIIAIAADSKAKSELPQMNINDTDAITA FT FIVEYVKQHQHKQQSDLSANCDELSPAFLSVSQGRAKILEAIKPLESNENVCLISSINA FT LSAQDILSPINVPQHNNSAMDGYVICGDDLERNSYTVVAEIMAGHSYDHPLQHGEAAKI FT MTGAPVPQNGNAVIMREQATQEGNQVRFDTGKSGIRKGQNVRLAGEDLAINQVCVAKGT FT RITAPEVGMLASLGIASVSVVTKTKVAIFSTGDEVQAPGEAQKANSIYDSNRFTLTALL FT QKLGCEVIDFGIIEDNEAALESTLSQASQQADMILSSGGVSVGDADYIKTILDKLGDIN FT FWRINMRPGRPLAFGHIGDTPFFGLPGNPVAVMVAFLQFVEPALRKLQGEDNWQPETYT FT AIAKEFIRSRTGRTEYSRGVYSINQNGQMEVVTTGKQGSGILRSMSEANCLIEVQPEVE FT SVNIGQKVTVIPLLSRI" FT misc_feature complement(1513847..1514068) FT /gene="moeA" FT /locus_tag="VSAL_I1397" FT /note="HMMPfam hit to PF03454, MoeA C-terminal region FT (domain IV), score 2e-19" FT /inference="protein motif:HMMPfam:PF03454" FT misc_feature complement(1514105..1514518) FT /gene="moeA" FT /locus_tag="VSAL_I1397" FT /note="HMMPfam hit to PF00994, Probable molybdopterin FT binding domain, score 2e-50" FT /inference="protein motif:HMMPfam:PF00994" FT misc_feature complement(1514198..1514299) FT /gene="moeA" FT /locus_tag="VSAL_I1397" FT /note="PS01079 Molybdenum cofactor biosynthesis proteins FT signature 2." FT /inference="protein motif:ProSite:PS01079" FT misc_feature complement(1514555..1515046) FT /gene="moeA" FT /locus_tag="VSAL_I1397" FT /note="HMMPfam hit to PF03453, MoeA N-terminal region FT (domain I and II, score 6.3e-54" FT /inference="protein motif:HMMPfam:PF03453" FT misc_feature complement(1515191..1515592) FT /gene="moeA" FT /locus_tag="VSAL_I1397" FT /note="HMMPfam hit to PF03205, Molybdopterin guanine FT dinucleotide synt, score 2.5e-48" FT /inference="protein motif:HMMPfam:PF03205" FT misc_feature complement(1515551..1515574) FT /gene="moeA" FT /locus_tag="VSAL_I1397" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1515613..1516197) FT /transl_table=11 FT /gene="mobA" FT /locus_tag="VSAL_I1398" FT /old_locus_tag="TVS1308" FT /product="molybdopterin-guanine dinucleotide biosynthesis FT protein A" FT /db_xref="GOA:B6EKR0" FT /db_xref="InterPro:IPR013482" FT /db_xref="UniProtKB/Swiss-Prot:B6EKR0" FT /protein_id="CAQ79083.1" FT /translation="MLQPKQTNWVILAGGQARRMGGQDKGFVTFQDKPLIEHALDTLRS FT QTDHIAINANRSIDNYSRYTVTFKDEFTDYPGPLAGMHAGLVNMASDWVGFIPCDSPNL FT PNNLISLLCNAVKDDTDIVVAHDGEYMQPVVTLMHKRIIPKIDAFLARGDRKIILLYKE FT CNTVFADFSDYPNAFINLNSPQELEQFGTLL" FT CDS complement(1516209..1516883) FT /transl_table=11 FT /locus_tag="VSAL_I1399" FT /old_locus_tag="TVS1309" FT /product="ABC transporter, ATP-binding protein" FT /note="Similar to Escherichia coli Glutamine transport FT ATP-binding protein GlnQ UniProt:P10346 (240 aa) blastp FT scores: E()=1e-18" FT /db_xref="GOA:B6EKR1" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:B6EKR1" FT /inference="similar to sequence:UniProt:P10346" FT /protein_id="CAQ79084.1" FT /translation="MTIRITADNLSMRFNDRVLFHIPHLSLGPKDSVYLRGANGVGKTT FT LLKILSGLQTATTGKLNLNQPHWTARLLGRSGNNQIVYLHQNPFLFDGTVYDNVIYGMK FT YTTMNRLEKRHMVINALRMVGLETLADEHISVLSGGEKQRVAMARAWVLTPSILLMDEP FT SASVDQESIKLLVIMAKDLLERGSSIVVTSHQTNALTEICHRQWTISDAKLIESTPIES FT DC" FT misc_feature complement(1516248..1516796) FT /locus_tag="VSAL_I1399" FT /note="HMMPfam hit to PF00005, ABC transporter, score FT 3.7e-38" FT /inference="protein motif:HMMPfam:PF00005" FT misc_feature complement(1516431..1516475) FT /locus_tag="VSAL_I1399" FT /note="PS00211 ABC transporters family signature." FT /inference="protein motif:ProSite:PS00211" FT misc_feature complement(1516752..1516775) FT /locus_tag="VSAL_I1399" FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT /inference="protein motif:ProSite:PS00017" FT CDS complement(1516894..1517592) FT /transl_table=11 FT /gene="tupB" FT /locus_tag="VSAL_I1400" FT /old_locus_tag="TVS1310" FT /product="permease component of tungstate ABC transporter" FT /note="Similar to Eubacterium acidaminophilum Permease FT component of tungstate ABC transporter TupB UniProt:Q93KD5 FT (228 aa) fasta scores: E()=1.8e-16, 35.407% id in 209 aa" FT /db_xref="GOA:B6EKR2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:B6EKR2" FT /inference="similar to sequence:UniProt:Q93KD5" FT /protein_id="CAQ79085.1" FT /translation="MTILATSHEAIQLLFSGDTALWSIVGVSFSVSLFAMAVVLLPALL FT LAFALAYGSFPGRWLLLSLINTLQSVPTVVIGLLLYMVLSRAGPLGDWQLLFTQEAMII FT GQMFICFPIMVAMMHGAFQHSDRRVWETAFTLGASLPRAFGSLIWETRFPILAAVIAGF FT SRIITEVGCSMMVGGNIFNATRNIPTAIAMESQKGAFAQGVALGMVLLILALVLNFFLS FT FTRGKGYLRT" FT misc_feature complement(1516900..1517532) FT /gene="tupB" FT /locus_tag="VSAL_I1400" FT /note="HMMPfam hit to PF00528, Binding-protein-dependent FT transport syst, score 0.0018" FT /inference="protein motif:HMMPfam:PF00528" FT misc_feature complement(order(1516930..1516998,1517041..1517109, FT 1517239..1517307,1517350..1517418,1517437..1517535)) FT /gene="tupB" FT /locus_tag="VSAL_I1400" FT CDS complement(1517596..1518417) FT /transl_table=11 FT /gene="tupA" FT /locus_tag="VSAL_I1401" FT /old_locus_tag="TVS1311" FT /product="extracellular tungstate binding protein FT precursor" FT /note="Similar to Eubacterium acidaminophilum Extracellular FT tungstate binding protein precursor TupA UniProt:Q93KD6 FT (286 aa) fasta scores: E()=1e-41, 49.796% id in 245 aa" FT /db_xref="InterPro:IPR024370" FT /db_xref="UniProtKB/TrEMBL:B6EKR3" FT /inference="similar to sequence:UniProt:Q93KD6" FT /protein_id="CAQ79086.1" FT /translation="MNNKISTFSAMAVVALSSFTATNVYAEDANVIRLATTTSTYHSGL FT LDYILPVFKKDSGYEVQVLAAGTGKALKMGENGDVDLVMTHAPKAEADFVEKGYGIEPK FT SLMYNDFVLVGPKNDPAHIYGMKDVTAAFAKMAEADATFVSRGDDSGTNKKEIILWNQA FT NIEPNFGGYKAVGQGMGPTLNMTSELQAYTLTDRGTWLAYQNKLDLEIMVEGDKRLFNP FT YQVILINPERYNNLNTKGARAFSDWLVSDKGQALINSFELSGQKLFTADAK" FT sig_peptide complement(1518340..1518417) FT /gene="tupA" FT /locus_tag="VSAL_I1401" FT CDS join(1518700..1518948,1518950..1520146) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1402" FT /old_locus_tag="TVS1313" FT /product="putative sigma-54 dependent response regulator FT (pseudogene)" FT /note="Similar to Escherichia coli Acetoacetate metabolism FT regulatory protein AtoC UniProt:Q06065 (461 aa), score FT E()=6e-78. CDS contains a frameshift after codon 83. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ79087.1" FT /inference="similar to sequence:UniProt:Q06065" FT misc_feature order(1518727..1518948,1518950..1519066) FT /locus_tag="VSAL_I1402" FT /note="HMMPfam hit to PF00072, Response regulator receiver FT domain, score 9.4e-33" FT /inference="protein motif:HMMPfam:PF00072" FT misc_feature 1519145..1519807 FT /locus_tag="VSAL_I1402" FT /note="HMMPfam hit to PF00158, Sigma-54 interaction domain, FT score 3.9e-134" FT /inference="protein motif:HMMPfam:PF00158" FT misc_feature 1519214..1519651 FT /locus_tag="VSAL_I1402" FT /note="HMMPfam hit to PF07728, ATPase family associated FT with various, score 0.00025" FT /inference="protein motif:HMMPfam:PF07728" FT misc_feature 1519217..1519258 FT /locus_tag="VSAL_I1402" FT /note="PS00675 Sigma-54 interaction domain ATP-binding FT region A signature." FT /inference="protein motif:ProSite:PS00675" FT misc_feature 1519400..1519447 FT /locus_tag="VSAL_I1402" FT /note="PS00676 Sigma-54 interaction domain ATP-binding FT region B signature." FT /inference="protein motif:ProSite:PS00676" FT misc_feature 1519781..1519810 FT /locus_tag="VSAL_I1402" FT /note="PS00688 Sigma-54 interaction domain C-terminal part FT signature." FT /inference="protein motif:ProSite:PS00688" FT misc_feature 1520006..1520128 FT /locus_tag="VSAL_I1402" FT /note="HMMPfam hit to PF02954, Bacterial regulatory FT protein, Fis fam, score 1.4e-10" FT /inference="protein motif:HMMPfam:PF02954" FT misc_feature 1520057..1520122 FT /locus_tag="VSAL_I1402" FT /note="Predicted helix-turn-helix motif with score FT 1664.000, SD 4.85 at aa 352-373, sequence FT GNKSAAARQLGVARKTLERKFK" FT CDS 1520143..1522170 FT /transl_table=11 FT /locus_tag="VSAL_I1403" FT /old_locus_tag="TVS1315" FT /product="signal transduction protein, histidine kinase" FT /note="Similar to Escherichia coli Signal transduction FT histidine-protein kinase AtoS UniProt:Q06067 (608 aa) fasta FT scores: E()=1e-20, 34.333% id in 300 aa" FT /db_xref="GOA:B6EKR5" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:B6EKR5" FT /inference="similar to sequence:UniProt:Q06067" FT /protein_id="CAQ79088.1" FT /translation="MMLSPSLWKRRIKTMVRYRLLWLNSVPLFLTMLALIIITAFWSIH FT YTWQNALNDVGSKLSVANNSIELLQREQSAELGGFVDSYAFQIKLKNGQDYIQRWSSNQ FT AAKYHADFISLHPANYAKKLPETLERQMYLGRSRTFFQVMDETALVEIDEDLPKRVSIR FT NKDNNIIETRGLISRTLIPIFNEHGSLEWIVDSGIILNNSTSLVDRIRDLIYPEGKGAT FT EQVGTVTLFLDDLRISTNVFTDDISGQERAIGTEVSPEVKHQVIENGERWVNRAYVYND FT WYISAYKPITDLNGNVVGMLYTGYLEWPLLKQYIYNLLQAGITILITLLLSTIFVHRGA FT RDLFQPIERIHYVVKSVQLGKNDRIGDLGLDNGHELASLAQQFDNMLDQLQLRNSQIQR FT ASKELESKVESRTASLHEKTIELEQYIKLLKQAQDKLIMSEKLASLGELTAGIAHEINN FT PTAVILGNAELIKYELGDNASVVSEELDAIMEQIDRIRNITRSLLQYSRQGGIQDEVTW FT QYINPIIEESVTLVRTGAHKRDIDVEFDFEQPPRVEVNRHHLLQVLVNLQMNGIHAMKA FT KGKLIIRSRTWQEEEINLGAIIEVEDFGSGMSHEQLGRIFDPFYTTKRDGTGLGLSVSQ FT SLLSQTGGEIKVRSQLGEGTVFTIYLPTKSEHYPYDNLIG" FT sig_peptide 1520143..1520289 FT /locus_tag="VSAL_I1403" FT misc_feature 1520200..1520268 FT /locus_tag="VSAL_I1403" FT misc_feature 1521103..1521318 FT /locus_tag="VSAL_I1403" FT /note="HMMPfam hit to PF00672, HAMP domain, score 2.7e-07" FT /inference="protein motif:HMMPfam:PF00672" FT misc_feature 1521472..1521675 FT /locus_tag="VSAL_I1403" FT /note="HMMPfam hit to PF00512, His Kinase A FT (phosphoacceptor) domain, score 1.2e-11" FT /inference="protein motif:HMMPfam:PF00512" FT misc_feature 1521802..1522134 FT /locus_tag="VSAL_I1403" FT /note="HMMPfam hit to PF02518, Histidine kinase-, DNA FT gyrase B-, and HSP90, score 9.9e-28" FT /inference="protein motif:HMMPfam:PF02518" FT CDS 1522197..1522598 FT /transl_table=11 FT /locus_tag="VSAL_I1404" FT /old_locus_tag="TVS1316" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR004360" FT /db_xref="UniProtKB/TrEMBL:B6EKR6" FT /protein_id="CAQ79089.1" FT /translation="MKKPIQQKIGSVALVVENYDDAIEFYTHKLNFELIEDTDLGDGKR FT WILISPPNSNGTNLLLAQASNEEQQKSVGNQTGGRVFLFLHTNDFWRDYEDMKKKGVVF FT NEEPRKEVYGTVVVFQDLYGTKWDLLELK" FT misc_feature 1522218..1522583 FT /locus_tag="VSAL_I1404" FT /note="HMMPfam hit to PF00903, Glyoxalase/Bleomycin FT resistance protein/Di, score 6.5e-18" FT /inference="protein motif:HMMPfam:PF00903" FT CDS complement(1522687..1522869) FT /transl_table=11 FT /locus_tag="VSAL_I1405" FT /old_locus_tag="TVS1317" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EKR7" FT /protein_id="CAQ79090.1" FT /translation="MKVIVQYTETGIYKDHAWEASSLRIKGQLHAVTPSYAAQLIEQRK FT AQLHTDQNDSIVIVN" FT CDS 1523086..1523517 FT /transl_table=11 FT /locus_tag="VSAL_I1406" FT /old_locus_tag="TVS1318" FT /product="membrane protein" FT /db_xref="InterPro:IPR007896" FT /db_xref="UniProtKB/TrEMBL:B6EKR8" FT /protein_id="CAQ79091.1" FT /translation="MRTRFDRIRHAILFEIIGLVIIVGVLSQLGFNMGHVGVMGVIFSI FT IATGWNYVYNIGFDNYLVKKTGSAVKTAWIRIVHSLGFEGGLLFLTIPFMAWFLNLTIW FT DAFVLDIGMVIFYLFYAYIYNFIYDTIFPVNAERVISKS" FT misc_feature 1523089..1523289 FT /locus_tag="VSAL_I1406" FT /note="HMMPfam hit to PF05232, Bacterial Transmembrane Pair FT family, score 1.5e-09" FT /inference="protein motif:HMMPfam:PF05232" FT misc_feature order(1523119..1523178,1523191..1523259,1523320..1523388, FT 1523401..1523469) FT /locus_tag="VSAL_I1406" FT misc_feature 1523296..1523499 FT /locus_tag="VSAL_I1406" FT /note="HMMPfam hit to PF05232, Bacterial Transmembrane Pair FT family, score 2e-20" FT /inference="protein motif:HMMPfam:PF05232" FT CDS 1523869..1524600 FT /transl_table=11 FT /locus_tag="VSAL_I1407" FT /old_locus_tag="TVS1319" FT /product="putative glycosyl transferase" FT /db_xref="GOA:B6EKR9" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:B6EKR9" FT /protein_id="CAQ79092.1" FT /translation="MSSVSIIIITLNEEKKIGCLLSDLTKQTHQKFEVIVVDSNSDDST FT CEAALTFQDDLPKLTVHKMDTTGVSLGRNTGAALAKYERILFLDADVCLSPDFLSKSLS FT LLDEKKLEVAGIYMGSKGLPTAHKLGYGLFNVGLFVTQFIFPTAVGACLFSTQRAHRDL FT QGFDEKITLCEDCDYVKRASQTWRFRFLPMTFQFDPRRLDQEGLFKIGFTYLKANVRRF FT FFGEMRNNEMEYKFGHYSEQK" FT misc_feature 1523881..1524360 FT /locus_tag="VSAL_I1407" FT /note="HMMPfam hit to PF00535, Glycosyl transferase family, FT score 1.3e-22" FT /inference="protein motif:HMMPfam:PF00535" FT CDS 1524623..1525201 FT /transl_table=11 FT /locus_tag="VSAL_I1408" FT /old_locus_tag="TVS1320" FT /product="membrane protein" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:B6EKS0" FT /protein_id="CAQ79093.1" FT /translation="MSGSVALFMGALLDALIGPNIFVPGEPFLIAAGYQLHQGMMGGVI FT AVLLGGLLGDQLSYFIGKGYGRKAQHSLIKWKPKTRRLLARCRFLLQTRGNVVLMFARL FT LGPIAWFVPFVAGVNQIQWRRFSLFSSIGLCLGVGQFIFFGYALSYGLDKFPWLIESKI FT LIIEYRYSITAVFIFGVFLLMTKKLRWKK" FT misc_feature order(1524650..1524718,1524737..1524805,1524911..1524979, FT 1524998..1525066,1525109..1525177) FT /locus_tag="VSAL_I1408" FT CDS join(1525583..1526467,1527475..1528149) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1409" FT /old_locus_tag="TVS1321" FT /product="transporter, BCCT family (pseudogene)" FT /note="Similar to Bacillus subtilis Glycine betaine FT transporter OpuD UniProt:P54417 (512 aa) fasta scores: FT E()=7e-41, 33.126% id in 483 aa. CDS is disrupted by the FT insertion of an IS element after codon 295" FT /db_xref="PSEUDO:CAQ79094.1" FT /inference="similar to sequence:UniProt:P54417" FT sig_peptide 1525583..1525693 FT /locus_tag="VSAL_I1409" FT misc_feature order(1525619..1526467,1527475..1528077) FT /locus_tag="VSAL_I1409" FT /note="HMMPfam hit to PF02028, BCCT family FT transporter,score 8.8e-59" FT /inference="protein motif:HMMPfam:PF02028" FT misc_feature order(1525640..1525708,1525736..1525804,1525841..1525909, FT 1526021..1526089,1526150..1526218,1526276..1526335, FT 1526372..1526440,1527538..1527606,1527640..1527708, FT 1527790..1527858,1527925..1527978,1528006..1528074) FT /locus_tag="VSAL_I1409" FT repeat_region complement(1526468..1527472) FT /note="VSa6" FT repeat_region complement(1526468..1526486) FT /note="IR of VSa6" FT CDS complement(1526495..1527376) FT /transl_table=11 FT /locus_tag="VSAL_I1410" FT /old_locus_tag="TVS1322" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EKS2" FT /protein_id="CAQ79095.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIELVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature complement(1526555..1527049) FT /locus_tag="VSAL_I1410" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(1527454..1527472) FT /note="IR of VSa6" FT CDS 1528352..1528810 FT /transl_table=11 FT /locus_tag="VSAL_I1411" FT /old_locus_tag="TVS1325" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EKS3" FT /protein_id="CAQ79096.1" FT /translation="MPNKDAIFQQLFLRETQGAPIVDRESVPLNHTHKQDYEKWLAEKR FT DFTIEEIDESHWIKSCTAGYITEVIFKESGSLTEFTLFERLKTVGHWQLKEGLVYVSIF FT KGENQYDFVIVANANVHIHSAIEYKNDEIHSYLKLAQTRVPYRLSQSH" FT CDS 1528916..1529311 FT /transl_table=11 FT /locus_tag="VSAL_I1412" FT /old_locus_tag="TVS1326" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EKS4" FT /protein_id="CAQ79097.1" FT /translation="MTALISDRQKNSRAKLLLCFVLLSVFICFSQLIGVTSSCQEHLIE FT AQARVHQLDSTIDNGSQTIAEKCDLVEHLLSFDNSIHDLLLCVWLLLGITLLVIPLLYT FT SLIFVEPIERQVQKIRRRHLTFCVFLE" FT sig_peptide 1528916..1529020 FT /locus_tag="VSAL_I1412" FT misc_feature order(1528952..1529020,1529174..1529242) FT /locus_tag="VSAL_I1412" FT CDS 1529362..1529850 FT /transl_table=11 FT /locus_tag="VSAL_I1413" FT /old_locus_tag="TVS1327" FT /product="putative membrane protein" FT /db_xref="UniProtKB/TrEMBL:B6EKS5" FT /protein_id="CAQ79098.1" FT /translation="MKKLEKAIEVIKYLPFYMLFAPFWFSNGVVDKFYGILFGTSHGDS FT WEGWKEYIAGTWAKKPLTDALFVPMFDYLFPVLVILQIVPVILLIASFLKLEILPNKPK FT TLLKAGLLSSLFVTSSMAVSQTLAGASDVQYLFQFWAVSLLAFWYVETQAKSMDLAIA" FT misc_feature order(1529398..1529451,1529575..1529643,1529677..1529745, FT 1529758..1529811) FT /locus_tag="VSAL_I1413" FT CDS complement(join(1529922..1530089,1532407..1533921)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1414" FT /old_locus_tag="TVS1328" FT /product="putative chitinase (pseudogene)" FT /EC_number="3.2.1.14" FT /note="Similar to Vibrio proteolyticus Chitinase FT UniProt:Q25BT4 (544 aa) fasta scores: E()=8.8e-163,73.545% FT id in 567 aa. CDS is disrupted by the insertion of an IS FT element after codon 506" FT /db_xref="PSEUDO:CAQ79099.1" FT /inference="similar to sequence:UniProt:Q25BT4" FT misc_feature complement(join(1529934..1530062,1532491..1532616)) FT /locus_tag="VSAL_I1414" FT /note="HMMPfam hit to PF02839, Carbohydrate binding domain, FT score 4.7e-13" FT /inference="protein motif:HMMPfam:PF02839" FT repeat_region 1530090..1532404 FT /note="VSa2" FT repeat_region 1530090..1530113 FT /note="IR of VSa2" FT CDS 1530171..1530485 FT /transl_table=11 FT /locus_tag="VSAL_I1415" FT /old_locus_tag="TVS1329" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ79100.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS 1530482..1530829 FT /transl_table=11 FT /locus_tag="VSAL_I1416" FT /old_locus_tag="TVS1329b" FT /product="transposase" FT /db_xref="InterPro:IPR008878" FT /db_xref="UniProtKB/TrEMBL:B6EGN4" FT /protein_id="CAQ79101.1" FT /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI FT FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL FT GHQPVHYQTTL" FT CDS 1530901..1532388 FT /transl_table=11 FT /locus_tag="VSAL_I1417" FT /old_locus_tag="TVS1331" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EHG8" FT /protein_id="CAQ79102.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS FT KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT FT LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA FT KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV" FT repeat_region 1532381..1532404 FT /note="IR of VSa2" FT misc_feature complement(1532497..1532538) FT /locus_tag="VSAL_I1414" FT /note="PS00761 Signal peptidases I signature 3." FT /inference="protein motif:ProSite:PS00761" FT misc_feature complement(1532902..1533657) FT /locus_tag="VSAL_I1414" FT /note="HMMPfam hit to PF00182, Chitinase class I, score FT 1.6e-22" FT /inference="protein motif:HMMPfam:PF00182" FT sig_peptide complement(1533865..1533921) FT /locus_tag="VSAL_I1414" FT CDS 1534103..1534549 FT /transl_table=11 FT /locus_tag="VSAL_I1418" FT /old_locus_tag="TVS1333" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6EKT0" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6EKT0" FT /protein_id="CAQ79103.1" FT /translation="MTSITEARKEDIKRIHEIETEAFGSHGYPSFFIRQAFDCWSNGLL FT VARKNDDVVGYLLQVPSSSTVGDAWVLSLAVSKQAQGGGLGKKLLETAIKNAKGYQRLL FT LTVCPKNQSAYALYQSYGFYLLNEEQDYFDEGEHRFVLAMDISQ" FT misc_feature 1534235..1534474 FT /locus_tag="VSAL_I1418" FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 3.3e-15" FT /inference="protein motif:HMMPfam:PF00583" FT CDS 1534590..1535009 FT /transl_table=11 FT /locus_tag="VSAL_I1419" FT /old_locus_tag="TVS1334" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6EKT1" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6EKT1" FT /protein_id="CAQ79104.1" FT /translation="MEIDYKVNEPMSAEQFIELLKKTTLGARRPIDDVARIQAMLDNSN FT LIVTAWGDGELIGVARSVTDFNFCCYLSDLAVDESVQSMGVGKYLILVTKEEVSPECKL FT ILLSAPQAEGYYPKIGFEAHNSAWVLSDESQLKLY" FT misc_feature 1534731..1534955 FT /locus_tag="VSAL_I1419" FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 2.7e-06" FT /inference="protein motif:HMMPfam:PF00583" FT CDS 1535018..1535806 FT /transl_table=11 FT /locus_tag="VSAL_I1420" FT /old_locus_tag="TVS1335" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EKT2" FT /db_xref="InterPro:IPR004455" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:B6EKT2" FT /protein_id="CAQ79105.1" FT /translation="MTSISILGCGWLGLPLAKQLVECGFSVKGSVRSEEKAHSLNEFSV FT TPFILNIDDATTDQQWDEFLGSEILIIAIPSKNTDGFMSLISALEKSFVKRVIFVSSTS FT VYKDTNDVVFESEAAQDSSTLYQIETLFTQSVFFATTVVRFSGLVGYSRNPGRFFQKSG FT RSVSNPDAAVSMIHQDDCIGLIEQIIKQNQWGQTFNACADTHPTKREFYTEMTQRIGVD FT TPTFIESENQTFKLISNQKIKEALGYEFIYPDVMQITYDE" FT CDS 1535830..1536660 FT /transl_table=11 FT /locus_tag="VSAL_I1421" FT /old_locus_tag="TVS1336" FT /product="sulfurtransferase (rhodanese-like protein)" FT /EC_number="2.8.1.2" FT /note="Similar to Escherichia coli 3-mercaptopyruvate FT sulfurtransferase SseA UniProt:P31142 (280 aa) fasta FT scores: E()=5.9e-30, 35.507% id in 276 aa" FT /db_xref="GOA:B6EKT3" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:B6EKT3" FT /inference="similar to sequence:UniProt:P31142" FT /protein_id="CAQ79106.1" FT /translation="MNNPLVTTDWLAAHINDENIVIVDAYMANVVGKVPLAYDVFSCLP FT NAIKLDVEADFCDPTSSQTHALPTESQFTQAVQALGINTDSTVIIYDNQGIYSSPRAWW FT TFKVMGFDNVYVLDGGLPQWIEEGREIAFEYSINQTIGNAVAKLHDQLACDSASVLNVI FT NTNAAIVDARAEMRFLGKAPEPREGVRSGHIPSSANLPFSILLDGFAYQNKEALRTIFQ FT ERIPTLETQSFFSCGSGITACILMLAAVSVGYNDVVLYDGSWADWGSNHALPIE" FT misc_feature 1535848..1536210 FT /locus_tag="VSAL_I1421" FT /note="HMMPfam hit to PF00581, Rhodanese-like domain,score FT 2.9e-18" FT /inference="protein motif:HMMPfam:PF00581" FT misc_feature 1536292..1536639 FT /locus_tag="VSAL_I1421" FT /note="HMMPfam hit to PF00581, Rhodanese-like domain,score FT 3.2e-11" FT /inference="protein motif:HMMPfam:PF00581" FT CDS 1536688..1536906 FT /transl_table=11 FT /locus_tag="VSAL_I1422" FT /old_locus_tag="TVS1337" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EKT4" FT /protein_id="CAQ79107.1" FT /translation="MQDGLRNKIIAVCNKKIEQKGGNVGLSFYAFFANKNDDPELLMEA FT ATWWISTHKLDHFEKAIKIKTMVENKE" FT CDS join(1536945..1537148,1537152..1537385) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1423" FT /old_locus_tag="TVS1338" FT /product="hypothetical protein (pseudogene)" FT /note="Similar to Vibrio fischeri Acetyltransferase, GNAT FT family UniProt:Q5E515 (148 aa) fasta scores: FT E()=6.3e-33,68.056% id in 144 aa. CDS contains a nonsense FT mutation (TAG) after codon 68. The sequence has been FT checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ79108.1" FT /inference="similar to sequence:UniProt:Q5E515" FT CDS 1537500..1537976 FT /transl_table=11 FT /locus_tag="VSAL_I1424" FT /old_locus_tag="TVS1340" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6EKT6" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6EKT6" FT /protein_id="CAQ79109.1" FT /translation="MDRIIFQKVTACEYPSLFSIYKKYLYSAIEDTFGWDEGFQTQHFA FT DSYRKEWFEWIMFNGERLGFICVKQEQTSVHFHLLLIFEKYQNKGVGSAVMKYYQRYYS FT DRVIKVSLSAFKCNQKVIDFYSALGYQITGENEHFFDMERSLCFNGYLGTDSYI" FT misc_feature 1537662..1537892 FT /locus_tag="VSAL_I1424" FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 1.3e-08" FT /inference="protein motif:HMMPfam:PF00583" FT repeat_region complement(1538044..1539157) FT /note="VSa8" FT repeat_region complement(1538044..1538072) FT /note="IR of VSa8" FT CDS complement(1538051..1538617) FT /transl_table=11 FT /locus_tag="VSAL_I1425" FT /old_locus_tag="TVS1341" FT /product="transposase" FT /db_xref="InterPro:IPR001584" FT /db_xref="UniProtKB/TrEMBL:B6EGL7" FT /protein_id="CAQ79110.1" FT /translation="MKFNNFSNILNSLIEMERTNKCELFYFDESGFSQKSNLPYCWGPI FT GVQSLRPAHSHSKRLNVLGFLSRQGKLSFQTTEGRVTTDTVIDAFEHFINARKNDKPCF FT IILDNASFHRSAKFKQKLHEWLMNDVLVCYLPPYSPELNIIEILWKKVKYEWLPCEAFK FT TFEDLSINIKNILNYYGEKFTITFA" FT CDS complement(1538635..1539057) FT /transl_table=11 FT /locus_tag="VSAL_I1426" FT /old_locus_tag="TVS1342" FT /product="transposase" FT /db_xref="InterPro:IPR009057" FT /db_xref="UniProtKB/TrEMBL:B6EGL6" FT /protein_id="CAQ79111.1" FT /translation="MKAVNPLTDNEKITLKEAIANHPKNRVRIRAHAIILSDKGYSILA FT LTDILDAKFETISSWIDHWEACGMLGLYDAVRIGRKPIYTEAEVYRLKSLVDEEPHQLK FT RAQAILEEETGKKSSLDTIKRNIKKVITVTKEPDTH" FT repeat_region complement(1539129..1539157) FT /note="IR of VSa8" FT CDS complement(1539188..1539427) FT /transl_table=11 FT /locus_tag="VSAL_I1427" FT /old_locus_tag="TVS1343" FT /product="hypothetical protein" FT /note="No significant database matches. Expression may be FT regulated by Fur" FT /db_xref="UniProtKB/TrEMBL:B6EKT9" FT /protein_id="CAQ79112.1" FT /translation="MHLTLFNNQKYRGKIMTMKWDHRKVSIDAFKHALKTHGHISLFSL FT AVWSDILSKHNESNIKVKKVYSLLEGTPIHEKGK" FT CDS complement(1540076..1540750) FT /transl_table=11 FT /locus_tag="VSAL_I1428" FT /old_locus_tag="TVS1344" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR004046" FT /db_xref="InterPro:IPR010987" FT /db_xref="InterPro:IPR012336" FT /db_xref="UniProtKB/TrEMBL:B6EKU0" FT /protein_id="CAQ79113.1" FT /translation="MTSPILYSLRQCPYAMRARLGIIHAHQIVLLRDVDMNNKPEEMLS FT ISPKGTVPVLLLENGSVIDESIDVMIWALNQSDPNNLLYSHDKALLPVMLELINRSDTE FT FVNALQKYRAASRYHDDNETACRDMCCGWLMEIEQRLSQHAYIMGEKPSLVDYSILPFI FT RQFSRVDKKWYAQAPLPYLRAWLVNHYNDPLFSKVMMTYPKWKNNDDSILFGDVHSRKK FT QR" FT misc_feature complement(1540562..1540741) FT /locus_tag="VSAL_I1428" FT /note="HMMPfam hit to PF00462, Glutaredoxin, score 0.004" FT /inference="protein motif:HMMPfam:PF00462" FT CDS join(1540933..1541619,1543059..1544624) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1429" FT /old_locus_tag="TVS1345" FT /product="putative peptidase (pseudogene)" FT /note="Similar to Vibrio fischeri Hypothetical protein FT UniProt:Q5E518 (747 aa) fasta scores: E()=0, 78.267% id in FT 750 aa. CDS is disrupted by the insertion of an IS element FT after codon 229" FT /db_xref="PSEUDO:CAQ79114.1" FT /inference="similar to sequence:UniProt:Q5E518" FT misc_feature 1541158..1541619 FT /locus_tag="VSAL_I1429" FT /note="HMMPfam hit to PF01136, Peptidase family U32, score FT 7.5e-28" FT /inference="protein motif:HMMPfam:PF01136" FT repeat_region complement(1541621..1543059) FT /note="VSa9" FT CDS complement(1541787..1542980) FT /transl_table=11 FT /locus_tag="VSAL_I1430" FT /old_locus_tag="TVS1347" FT /product="transposase" FT /db_xref="GOA:B6EIP3" FT /db_xref="InterPro:IPR007069" FT /db_xref="UniProtKB/TrEMBL:B6EIP3" FT /protein_id="CAQ79115.1" FT /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA FT AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT FT LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL FT SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW FT SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD FT HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE FT AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA" FT CDS 1544754..1545284 FT /transl_table=11 FT /locus_tag="VSAL_I1431" FT /old_locus_tag="TVS1350" FT /product="putative acetyltransferase" FT /db_xref="GOA:B6EKU3" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:B6EKU3" FT /protein_id="CAQ79116.1" FT /translation="MAVLHLLTIDDTSALLAFELANKEWFESFIEARDDDFFDDEGIKA FT HIVCCLSEYEKGKTYPMLLKDDLGVICGRANLYNINKEKESASIGYRIGEDFVSKGLAT FT CATKILIDIAKDTLGLSSLTASASTDNFASQQVLKKNGFKQVGFKPEFTIVDGEIIDCY FT EYRCVIKQLSVAI" FT misc_feature 1544940..1545185 FT /locus_tag="VSAL_I1431" FT /note="HMMPfam hit to PF00583, Acetyltransferase (GNAT) FT family, score 0.0001" FT /inference="protein motif:HMMPfam:PF00583" FT CDS 1545349..1545699 FT /transl_table=11 FT /locus_tag="VSAL_I1432" FT /old_locus_tag="TVS1351" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:B6EKU4" FT /protein_id="CAQ79117.1" FT /translation="MEMIIVSSERQKRLIMIFARMKAKMSDKALLKNLDAYDINSTAYA FT AFKKASDLHIERIHLPFGDDRTGSLDGGDFLFRYLSKGYICLGDFEGQPKPDLAPWGVR FT SVRRQPKIGFGL" FT CDS 1546052..1548943 FT /transl_table=11 FT /locus_tag="VSAL_I1433" FT /old_locus_tag="TVS1352" FT /product="putative exported protein" FT /db_xref="GOA:B6EKU5" FT /db_xref="InterPro:IPR002591" FT /db_xref="InterPro:IPR017849" FT /db_xref="UniProtKB/TrEMBL:B6EKU5" FT /protein_id="CAQ79118.1" FT /translation="MKNRSFSSIFILSVLSLSMLSANSSANVSAIPVIGGVVNSAEILK FT NQINASVIYTTKTVRDAAIFTIAGITLDAYILSLPLESDVKKSIIAKLSNPSYAIPLGH FT FLYTFVDKYGDMDNEDAFKAYLKTQYDEETLTGFSHSLFTLNEEDKEKEPELADSHHQG FT LTIDRKFIANMVIVYDELVQIGEWKDLDVLPERYTYLSDTPEDKKIIDKIQPIIIASMT FT KAVTGMNEGEMRATLEQIIEDGQPEHKGSVNNKAEALTITLIDFVRLNVLKSYRQFIYQ FT EQRQEVLNEWLQARFKDNPDTLIAYLDSRQQRRLAVQVTVDGLQQGLLEGLVSPLKKPF FT IKQIYQDHLNHESYKPQNEITTQPEHEQQLSFLKRLTEKEYKDPSYLPFFTELYKNYDN FT SIVDVGISSTPTISVRNLPIIKTGAKVSGKGGTGIPNFHFVDRKEDRAYYFFGNDALQL FT DRLMEANKVQTMFDRLDYLVTLNCNAQYDWNAHTTYDGLVNLGAGESLRDFGEKRCLRE FT LTQRAEIEKTVSTMRADLIEDIRVYDGIFALDIYSKLTQKWKIQQNLESLSKLEQKGMP FT DYTLIYNPWPDHFAHFTGPFSDEILMPTGELNRLDYWLTQFTNTYKDAGVYDRTLWGMA FT GDHGLAPVYYSLNPEKQVFEPLEKELGYPLVIKKISSDEGEGPKITNALNYESNKEVDV FT VVASTAGGNFMMDFFNSAQGWKVQPTYAELTTWTPVNALKGKSINVINEVASRLEESLD FT YLVVREKNCTLDECTVRIIGFKDDVRVDELITKKGDRLLYQPVIGSSQLLELDVLNPYK FT SQPNKAELASYQELYQRCMVSAKADKPTAWCTKAQWRALTAFSARPDSVNQLATLYEED FT RAGTINLFPKFGVGFNTKVPGRHAGEHYLEKDAFLGFWGTPVGPNVTALTSEANGSLAP FT TLYEYLTQETVIENNNGWGYPSLLDDLDIQPSK" FT sig_peptide 1546052..1546141 FT /locus_tag="VSAL_I1433" FT CDS complement(join(1548964..1549221,1549225..1549857)) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1434" FT /old_locus_tag="TVS1354" FT /product="HTH-type transcriptional regulator, LysR family FT (pseudogene)" FT /note="Similar to Bacillus subtilis GltR UniProt:P94501 FT (296 aa) fasta scores: E()=4.4e-14, 26.749% id in 243 aa. FT CDS contains a nonsense mutation (TAA) after codon 211. The FT sequence has been checked and is believed to be correct" FT /db_xref="PSEUDO:CAQ79119.1" FT /inference="similar to sequence:UniProt:P94501" FT misc_feature complement(order(1548982..1549221,1549225..1549602)) FT /locus_tag="VSAL_I1434" FT /note="HMMPfam hit to PF03466, LysR substrate binding FT domain, score 1.3e-26" FT /inference="protein motif:HMMPfam:PF03466" FT misc_feature complement(1549669..1549848) FT /locus_tag="VSAL_I1434" FT /note="HMMPfam hit to PF00126, Bacterial regulatory FT helix-turn-helix protei, score 2e-18" FT /inference="protein motif:HMMPfam:PF00126" FT misc_feature complement(1549714..1549806) FT /locus_tag="VSAL_I1434" FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT /inference="protein motif:ProSite:PS00044" FT misc_feature complement(1549744..1549809) FT /locus_tag="VSAL_I1434" FT /note="Predicted helix-turn-helix motif with score FT 1561.000, SD 4.50 at aa 44-65, sequence FT GSFRKAAKHLCTTQPAISTRIA" FT CDS 1550006..1550791 FT /transl_table=11 FT /locus_tag="VSAL_I1435" FT /old_locus_tag="TVS1356" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR009906" FT /db_xref="InterPro:IPR016938" FT /db_xref="UniProtKB/Swiss-Prot:B6EKU7" FT /protein_id="CAQ79120.1" FT /translation="MDKDLSLDNLRKKIRSNEFTKATSGYAPGYLQANLVILPALWATD FT FLLFCQKNPVACPLIDVTQPGERYLPSIGADIDLSRDVPEYHVFYEGNFEASVPDLTEL FT WQDDLVTFVLGCSFSFEEALIQSGLSIRNIDDGKNVSMYDTNIACQPAGKFDGNFVVSM FT RPFTPKDAIRAIQITTRFPKSHGAPVHFGDPSVIGISDIAKPNYGEAVHINSDEIPVFW FT ACGVTPQNVIRQSRPPFCITHAPGKMLITDRLSSEFAVL" FT misc_feature 1550330..1550761 FT /locus_tag="VSAL_I1435" FT /note="HMMPfam hit to PF07286, Protein of unknown function FT (DUF1445), score 2.2e-95" FT /inference="protein motif:HMMPfam:PF07286" FT CDS 1550854..1551594 FT /transl_table=11 FT /locus_tag="VSAL_I1436" FT /old_locus_tag="TVS1357" FT /product="conserved hypothetical protein" FT /db_xref="GOA:B6EKU8" FT /db_xref="InterPro:IPR005501" FT /db_xref="InterPro:IPR011330" FT /db_xref="UniProtKB/TrEMBL:B6EKU8" FT /protein_id="CAQ79121.1" FT /translation="MKINCDMGESFGLWALGEDAAVMPALDMANIACGMHASDPSVMMK FT TVALAKDNGVMVGAHPGYNDLQGFGRRDIAMNATDLAALFIYQLGALQGICQSQNTRLS FT YVKPHGALYNAMMKDDAILETLLGALQRYDVTLPFVVMAVPDHARYQTLADKFGITLWF FT EAFVDRAYDEEGRLVPRSVPNSSHYTDEAIQHQADQLIDQGCVTTLSGKTIAIHADTLC FT IHGEGPFAVSTATYLRKKLQKKAE" FT misc_feature 1550860..1551585 FT /locus_tag="VSAL_I1436" FT /note="HMMPfam hit to PF03746, LamB/YcsF family, score FT 8.7e-115" FT /inference="protein motif:HMMPfam:PF03746" FT CDS 1551597..1552316 FT /transl_table=11 FT /locus_tag="VSAL_I1437" FT /old_locus_tag="TVS1358" FT /product="putative allophanate hydrolase subunit 1" FT /note="Similar to Bacillus subtilis Kinase A inhibitor KipI FT UniProt:P60495 (240 aa) fasta scores: E()=2.1e-23,34.361% FT id in 227 aa" FT /db_xref="GOA:B6EKU9" FT /db_xref="InterPro:IPR002130" FT /db_xref="InterPro:IPR003833" FT /db_xref="InterPro:IPR010016" FT /db_xref="UniProtKB/TrEMBL:B6EKU9" FT /inference="similar to sequence:UniProt:P60495" FT /protein_id="CAQ79122.1" FT /translation="MKISAVNESTVLVVFSDTVSPETADIIAQSVAMINQESDLFVIDM FT VPSYTSILITYDLTRIELRSFMSRLHHCLHQDNNSGQLPLSSVVIELPVYYGPEVSLDA FT EDISRHTGLSFDEVVSIHSSQEYRVYAIGFAPGFAYLGNTDSRIHIPRKSTPRLSVPAG FT SLAIAEQQTAIYPKSSPGGWQVIGRTPINLIDFNRDNLTVFEMGAKVTFRPISREEYLT FT MGGELPEALLVKEGSKV" FT misc_feature 1551597..1552208 FT /locus_tag="VSAL_I1437" FT /note="HMMPfam hit to PF02682, Allophanate hydrolase FT subunit, score 4e-50" FT /inference="protein motif:HMMPfam:PF02682" FT CDS 1552313..1553269 FT /transl_table=11 FT /locus_tag="VSAL_I1438" FT /old_locus_tag="TVS1359" FT /product="putative allophanate hydrolase subunit 2" FT /db_xref="GOA:B6EKV0" FT /db_xref="InterPro:IPR003778" FT /db_xref="UniProtKB/TrEMBL:B6EKV0" FT /protein_id="CAQ79123.1" FT /translation="MTLRIHSTGPLALLQDKGRYGHQSVGVTPGGPMDEHAFDWANKLV FT DNDSNATQIEITLGQFSCTFYAATTIALTGADMGAKLNGDAISPWQSYAINSGDKLEMS FT IAKSGLRAYLAVSGGFKVETILGSSATVSRDGLGGDDGKGSALIPNRLIRYSVDVSQLS FT ASFSEPRLRKQVPSRFIPTYDRHINIGVIPSYQYNDFSIADRQRFFSSIYTVSTNIDRM FT GYRLSGEPIHCKRNNLISEGIALGSIQIPSDGQPIVLMRDRQTIGGYPKIGCVVHADIN FT RLAQCLPGSTVQFYEKELYSAEAELMIQRQFFTSYCS" FT misc_feature 1552382..1553251 FT /locus_tag="VSAL_I1438" FT /note="HMMPfam hit to PF02626, Allophanate hydrolase FT subunit, score 3.2e-69" FT /inference="protein motif:HMMPfam:PF02626" FT repeat_region order(1553283..1553922,1554928..1556604) FT /note="VSa2" FT repeat_region 1553283..1553306 FT /note="IR of VSa2" FT CDS 1553364..1553678 FT /transl_table=11 FT /locus_tag="VSAL_I1439" FT /old_locus_tag="TVS1360" FT /product="transposase" FT /db_xref="UniProtKB/TrEMBL:B6EGN3" FT /protein_id="CAQ79124.1" FT /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA FT RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS FT " FT CDS join(1553675..1553920,1554928..1555029) FT /pseudo FT /transl_table=11 FT /locus_tag="VSAL_I1440" FT /old_locus_tag="TVS1361" FT /product="transposase (pseudogene)" FT /note="Similar to Pseudoalteromonas haloplanktis Putative FT transposase UniProt:Q3IIG1 (115 aa) fasta scores: FT E()=8.1e-32, 58.3% id in 115 aa. CDS is disrupted by an IS FT element after codon 82" FT /db_xref="PSEUDO:CAQ79125.1" FT /inference="similar to sequence:UniProt:Q3IIG1" FT misc_feature 1553690..1553920 FT /locus_tag="VSAL_I1440" FT /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score FT 6.2e-18" FT /inference="protein motif:HMMPfam:PF05717" FT repeat_region complement(1553923..1554927) FT /note="VSa6" FT repeat_region complement(1553923..1553941) FT /note="IR of VSa6" FT CDS complement(1553950..1554831) FT /transl_table=11 FT /locus_tag="VSAL_I1441" FT /old_locus_tag="TVS1362" FT /product="transposase" FT /db_xref="InterPro:IPR002559" FT /db_xref="UniProtKB/TrEMBL:B6EH02" FT /protein_id="CAQ79126.1" FT /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC FT MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK FT GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS FT LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE FT ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI FT KLSECEFELILA" FT misc_feature complement(1554010..1554504) FT /locus_tag="VSAL_I1441" FT /note="HMMPfam hit to PF01609, Transposase DDE domain,score FT 9.3e-30" FT /inference="protein motif:HMMPfam:PF01609" FT repeat_region complement(1554909..1554927) FT /note="IR of VSa6" FT CDS 1555101..1556588 FT /transl_table=11 FT /locus_tag="VSAL_I1442" FT /old_locus_tag="TVS1364" FT /product="transposase" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR024463" FT /db_xref="InterPro:IPR024474" FT /db_xref="UniProtKB/TrEMBL:B6EGR2" FT /protein_id="CAQ79127.1" FT /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS FT ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC FT CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK FT GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL FT HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY FT HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKG