ID FJ492743; SV 1; circular; genomic DNA; STD; VRL; 7810 BP. XX AC FJ492743; XX DT 16-SEP-2009 (Rel. 102, Created) DT 23-OCT-2009 (Rel. 102, Last updated, Version 2) XX DE Canine papillomavirus 5 isolate Birkenfeld, complete genome. XX KW . XX OS Canine papillomavirus 5 OC Viruses; dsDNA viruses, no RNA stage; Papillomaviridae; Chipapillomavirus. XX RN [1] RP 1-7810 RX DOI; 10.1099/vir.0.014498-0. RX PUBMED; 19656968. RA Lange C.E., Tobler K., Ackermann M., Panakova L., Thoday K.L., Favrot C.; RT "Three novel canine papillomaviruses support taxonomic clade formation"; RL J. Gen. Virol. 90(Pt 11):2615-2621(2009). XX RN [2] RP 1-7810 RA Lange C.E., Tobler K., Ackermann M., Favrot C.; RT ; RL Submitted (26-NOV-2008) to the INSDC. RL Dermatology, Vetsuisse Faculty University of Zurich, Winterthurerstrasse RL 260, Zurich, Zurich 8057, Switzerland XX FH Key Location/Qualifiers FH FT source 1..7810 FT /organism="Canine papillomavirus 5" FT /host="Canis lupus familiaris" FT /isolate="Birkenfeld" FT /mol_type="genomic DNA" FT /country="Germany" FT /collection_date="Sep-2007" FT /db_xref="taxon:658422" FT CDS 422..880 FT /codon_start=1 FT /product="E6" FT /db_xref="GOA:C8YJK5" FT /db_xref="InterPro:IPR001334" FT /db_xref="UniProtKB/TrEMBL:C8YJK5" FT /protein_id="ACU27450.1" FT /translation="MERPWSLAGLSLRSGVPFCHLHVPCVFCGIPLDYEDRVAFDYKAF FT QVTWKNGQPHGFCTRCSRNLAQHEVGFFTQEELTYKEFVQRLGAGFYYVPVRCTICYGL FT VTATQKIEALYRRQTFKKVRGRWRTPCNNCAQSDNNDWERRYFERYSP" FT CDS 840..1142 FT /codon_start=1 FT /product="E7" FT /db_xref="GOA:C8YJK6" FT /db_xref="InterPro:IPR000148" FT /db_xref="UniProtKB/TrEMBL:C8YJK6" FT /protein_id="ACU27451.1" FT /translation="MIGKDATLRDIVLEEQPTPLDILWCDEELTPSDDEEEEPTSNQNL FT SPFRIQTHCGTCERGIRIVVLCTQEGIHCLETLLCNNTSFCCPVCAATYKFDHGR" FT CDS 1132..3021 FT /codon_start=1 FT /product="E1" FT /db_xref="GOA:C8YJK7" FT /db_xref="InterPro:IPR001177" FT /db_xref="InterPro:IPR014000" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR016393" FT /db_xref="UniProtKB/TrEMBL:C8YJK7" FT /protein_id="ACU27447.1" FT /translation="MDGELDSGTDPEEGTSSGGLILREAECSDMDTSEDADEDDDMGDF FT INDNLEGQCSQGNSQALLHQQRAREDNRQVQVLKRKYASPKQKVDSDLSPRLRAITISP FT PKQTAKRRLFSHSVDSGLEASGENETGNSIETDSDQVDAVMLVGEEDERLGRTPPQGGF FT RMRGGSQALLTQLMKSSNQRATQYALFKKGYGISLSELTRPFKSNKTCNPDWVAVGFGV FT HHNTYNDIVQRLEKHCEYVQLLGNAGSAGYIVLLLMRFTAHKSRDTLKKLLKNILNVSD FT AQLILDPPKVRSVAAALYWYRNSMSTAVQTHGTLPEWVTRQTLVQHHCGEEAKFVLATM FT VQWAYDNDHTEESDIAYHYALLADEDANAAAWLGTNSQAKHVRDCSVMVKHYKRAIMAS FT LSMSEWINRRINLIDEEGDWKHIGNFLRFQCVEVIAFIGALKNMLKKIPKKTCICIVGP FT PDTGKSAFCLSLLEFFGGKVISFTNYKSQFWLQPLADTRLALLDDATKTTWDYIDAYLR FT NALDGNTICLDLKHKAPLQIRCPPLLITTNIDIRENDRWRYLYSRIYTVEFKYAFPFNE FT EGEPVYQLTKGNWKSFFKRLWSRLDLSEQEDEGEDGEPDKAFRCDTRRAPDHL" FT CDS 2963..4432 FT /codon_start=1 FT /product="E2" FT /db_xref="GOA:C8YJK8" FT /db_xref="InterPro:IPR000427" FT /db_xref="InterPro:IPR001866" FT /db_xref="InterPro:IPR012677" FT /db_xref="UniProtKB/TrEMBL:C8YJK8" FT /protein_id="ACU27448.1" FT /translation="MESLTKRLGAIQDALLTIYEEGSDRLSDQVQHWNLLRKENVLLHY FT AKKAGILRLGLQPVPALRVSAEKAKQAIGMQLVLQSLQNSAYATEQWTLQDTSYERWMA FT EPSSCLKKGATYVEVYFDGDRANSMQYTMWHHVYFTDWTDTWQKTRSHVTSDGLWFWDN FT GERRYYVRFEDEAKKYATTGKWDVMFNNEPICPLESVTSTTPSTNLGAKTSVPVDWEPR FT RVAGGGGTAGPTGQGNWRAPQRDTWQAADSTETPSFTAPEVTQAEEEQVPCEEAPGVGG FT GLAVSGSLCSDPAVSESCRDPRGLLVSEYTGVSSGAEPLSRCVSPESGSGQPGTLQAPA FT APEPGLGHFPAASAANTPAPAGPEANPAAAEGGPREGAEAGFQGRFPAASRPRRRPRQI FT LREAGDSSTSVIVLSGPSNVLKCFRYRAKQMHKGCFCMISTTWYWAGDGSERIGNARIL FT VTFSSNSQRAEFLDRVRLPSSVTLLDSIHTF" FT CDS 3429..4193 FT /codon_start=1 FT /product="E4" FT /db_xref="UniProtKB/TrEMBL:C8YJK9" FT /protein_id="ACU27449.1" FT /translation="MDSGSGTMVKGGTMYGSRMRPKSMQQRESGMLCLTMNLFALLNLL FT PAPHRPQTLVQRLLFLLTGSHDGWPEEVELQDLQDRETGEPRRGTRGRPPTPQRPPPSP FT PPRSRRRRKNRSPVRRPPEWEEDLQYLGACALTPPLASPAETPEDCWYPSTQESPPVLS FT PCPGASPPSQGPDSPEHYRHPRPRSPDWDTFQPLPRPTPLPLPDQRPTLQQQKEALEKA FT LRQVSKDAFQLQVDLDADLGRFFGKLGIAPRQ" FT CDS 4628..6145 FT /codon_start=1 FT /product="L2" FT /db_xref="GOA:C8YJL0" FT /db_xref="InterPro:IPR000784" FT /db_xref="UniProtKB/TrEMBL:C8YJL0" FT /protein_id="ACU27453.1" FT /translation="MVRARRTKRASAADLYKTCKAANTCPPDVINTYEHKTVADKILQI FT GGAAVFFGGLGIGTGAGKGGATGYTPLGGRVSSGVTVGTGTRVVRPPVPIDVLGASEVV FT PVDALAPSVVPLHEAVPEIPLLEITPGEPTGLPTVPLEVPVDTSGSSFDAGPVRVTVHA FT VVEPVPSTPPVRTSVSWSQHSNPAFDILPDSNNSLGETSSSSNILVTHSNGGVSVGVSE FT EIPLQVFRTSTPRSTPVRPATARRGGYPRRFIEQVDISDPGVLEDPGRRVQFDFDNPAF FT EGTLEFEPPPYPEVRAAPDPRFRDILKLSSTRYGQTESGHVRIARTGIRGTITTRSGVQ FT LGSQAHFYHDISTLTVPEEIELTALGEHSGTTVVVSGGGSESAMEVIDLDSSSFSSIGL FT DSDDLEALLGVEDLPAFENLRLEFPMRRNRVTLDLPTRNLAMPGPLDINQEVYVDYPGS FT DSGGVYGPFGPEPPLVIADITMGEGTDYYLHPSLTRKRRRRRRRRSL" FT CDS 6167..7672 FT /codon_start=1 FT /product="L1" FT /db_xref="GOA:C8YJL1" FT /db_xref="InterPro:IPR002210" FT /db_xref="InterPro:IPR011222" FT /db_xref="UniProtKB/TrEMBL:C8YJL1" FT /protein_id="ACU27452.1" FT /translation="MAVWVSNSQKLFLPPNPVSKVLHTDTYVKRTSVFCHAGSDRLLTV FT GNPFFSILDEDQKTVKVPKVSSNQYRVFRVSLPDPNQFAFAERPTHDPEKERLVWGLRG FT MDVGRGQPLGIGVTGHPLFNRFSDVENPGKYQDKAQPKDSRQNVGFDAKQTQVLIVGCT FT PAMGEHWESAPACNGAVKGSCPPLELRNTVIQDGDMLEIGYGAMDFRNLSRNRSDAPLD FT IILSISKYPDYLKMSKEASGDSMFFFARREQEYIRHFFTREGKVGEDVPEALMYPADDS FT QPQKTNLGTPVYYGAPSGSLTSSDSQIFNRPYWLQRSQGLNNGICWLNQLFVTVGDTTR FT GTNMTISVSNEADPEKYDSSKFSVYLRHTEEFELSFIFQLCIVPLTPDVIAQLHSLNPL FT ILDKWNIGLQPPTATLLEDKYRYIDSLATRCPSKVPPKPSEDPYSGLTFWMVDLTEKFS FT QDLDQFPLGRKFLAQSNLSTTRKRARSPSTSKSTRTVKKKKSK" XX SQ Sequence 7810 BP; 2047 A; 1860 C; 2028 G; 1875 T; 0 other; gcacctggat atttctggca gtacatccac cgctcccggt gcagacggct tctgccaagc 60 tactcggtgt tctgccaaac gtcggcttag atgactgatc aacacggtgt ggcgccaact 120 ggcaggatta aagctttcta atcttttttg gcgcggattc tgcagcggct tccagaccgg 180 cagcggttgc tgcatacaga ataggcttgg gttctactgc caactaaggc ttatctgatg 240 gattaaacgg gagcggttcc actgaccgcc ggcggtacag gtaaagactt ctactctcta 300 tattgttgtt agcaacaaca acaaccgttt gcggttaagt gacgttgtac cgtcaacggt 360 catcttggcc atgccaattt tctagctatt tattgacaga aaaaccgttg cgaggcgggc 420 tatggagcgc ccatggagcc ttgcaggtct tagcctgcgt tcaggagtgc ccttttgtca 480 tctacatgta ccctgtgtgt tctgtgggat acccttagac tatgaggacc gtgtagcctt 540 tgattataag gcattccagg taacctggaa aaacggacag ccacacggat tttgcacccg 600 ttgttccaga aatcttgcac agcacgaggt gggatttttt acccaagagg agctgaccta 660 taaggaattt gttcagagac ttggtgcagg attttactat gtgcctgtga gatgcacaat 720 ttgttatgga ctagtgaccg ctacccagaa gattgaagcc ctttacagaa ggcaaacatt 780 caaaaaggtc agagggcggt ggcggacgcc ctgcaacaat tgtgcacaat ctgataataa 840 tgattgggaa agacgctact ttgagagata tagtccttga ggagcaaccc acaccacttg 900 acattctctg gtgtgatgag gagctaacac cgtccgatga tgaggaggag gagccgacct 960 ccaatcaaaa cctgagtcca tttagaatac aaacccattg tggcacctgc gagcgaggga 1020 tcaggatcgt tgtgctgtgc acccaggagg ggatccactg cctagaaacc ctgctgtgca 1080 acaacacatc attctgctgt ccggtctgcg cagccaccta caaatttgac catggacggt 1140 gaactagatt caggtacaga tcctgaggaa ggcacaagtt cggggggact tatattgcgg 1200 gaagcagagt gtagtgacat ggatactagt gaggatgcag acgaggacga cgacatgggt 1260 gactttatta atgataacct ggagggacag tgtagtcagg ggaattccca agctttattg 1320 caccagcaga gagcgaggga ggacaatagg caggtacagg tcctaaaaag aaagtatgca 1380 agtccgaaac agaaagtgga ttcagaccta agccccaggc ttagagctat aacaatatca 1440 ccacctaaac aaacagcaaa gcgcaggtta ttttcacaca gtgtagacag cgggctggag 1500 gcgtcgggag aaaatgaaac tggcaattct attgagacgg actccgatca ggtagatgcg 1560 gtcatgttgg tgggcgagga ggacgaacgt ctgggccgta cccctccgca gggcgggttt 1620 agaatgagag gggggtcaca ggcattattg acacagctaa tgaaatcctc taatcagaga 1680 gctacgcagt atgcattgtt taaaaagggg tatggtatta gtctttcgga gttgaccagg 1740 ccatttaaaa gcaataagac atgtaatcct gactgggtcg cggtgggctt tggcgtgcat 1800 cacaatacct ataatgatat tgtacagaga ctagaaaaac attgtgaata cgtgcagctg 1860 ttagggaatg cagggtccgc ggggtatata gttctcctgt tgatgagatt cactgcacac 1920 aaaagcagag acacgttaaa aaaactgcta aaaaatatat tgaacgtgtc ggacgcacag 1980 ctcatactag accctccaaa agttagaagt gttgcagctg cattatattg gtatagaaat 2040 agtatgtcca ctgctgtaca aacccacggc accctaccag agtgggtgac acgacaaaca 2100 ctagtacagc accattgcgg cgaagaggca aaatttgttt tggcaaccat ggtgcagtgg 2160 gcatatgaca atgaccacac agaggagagc gacatagcct atcactatgc attactagca 2220 gatgaggatg ctaatgccgc cgcatggcta gggacaaact cgcaggccaa gcatgtcaga 2280 gactgctctg ttatggttaa gcattataag agggcgataa tggcgtcatt atctatgtcg 2340 gagtggataa atagaagaat aaatctgata gatgaggaag gggactggaa gcacataggg 2400 aactttctta gattccagtg tgtagaagtg attgcattta taggagcgct gaaaaacatg 2460 ctaaaaaaaa tacctaaaaa aacctgcata tgtatagtgg gccccccgga tacggggaag 2520 tcagcttttt gcctaagcct gctagaattc tttgggggaa aggtgatatc attcacaaac 2580 tataaaagcc aattttggct gcagccatta gctgacacca gacttgcctt gctagacgat 2640 gctactaaaa caacgtggga ttacatcgat gcgtatctaa gaaatgcgct ggacggaaat 2700 actatttgcc tggaccttaa acataaggct ccattgcaaa taagatgtcc gccattgctt 2760 attaccacaa acattgacat tagagagaac gacagatggc gctacctata tagcagaatc 2820 tacacagttg aatttaagta tgcctttccc tttaacgagg agggcgagcc tgtgtatcaa 2880 ttaacaaaag gtaactggaa atcgtttttc aaaaggttgt ggtcacgatt agacctaagt 2940 gagcaagagg acgaggggga agatggagag cctgacaaag cgtttaggtg cgatacaaga 3000 cgcgctcctg accatttatg aagagggcag cgaccggctg tcagatcagg tccagcactg 3060 gaacctgctc aggaaggaaa atgttctgct ccactatgcc aaaaaggccg gtatcctaag 3120 gctagggctg caaccggtgc cagctctgag agtgtcagcc gaaaaagcga agcaggctat 3180 agggatgcag ctggtattgc aatctctgca gaactctgca tacgccacgg agcagtggac 3240 attacaggac acgagctacg agaggtggat ggcagagcct agcagctgtc taaaaaaagg 3300 agcaacatac gtggaggtgt attttgatgg ggacagggct aattcaatgc aatatactat 3360 gtggcaccac gtgtatttca cggactggac agatacatgg cagaagacac ggagccacgt 3420 aactagtgat ggactctggt tctgggacaa tggtgaaagg aggtactatg tacggttcga 3480 ggatgaggcc aaaaagtatg caacaacggg aaagtgggat gttatgttta acaatgaacc 3540 tatttgccct cttgaatctg ttaccagcac cacaccgtcc acaaaccttg gtgcaaagac 3600 ttctgttcct gttgactggg agccacgacg ggtggccgga ggaggtggaa ctgcaggacc 3660 tacaggacag ggaaactgga gagccccgca gagggacacg tggcaggccg ccgactccac 3720 agagaccccc tccttcaccg cccccgaggt cacgcaggcg gaggaagaac aggtcccctg 3780 tgaggaggcc cccggagtgg gaggaggact tgcagtatct gggagcctgt gctctgaccc 3840 cgccgttagc gagtcctgca gagaccccag aggactgctg gtatccgagt acacaggagt 3900 ctcctccggt gctgagcccc tgtccaggtg cgtctccccc gagtcagggt ccggacagcc 3960 cggaacacta caggcacccg cggccccgga gcccggactg ggacactttc cagccgcttc 4020 cgcggccaac acccctgccc ctgccggacc agaggccaac cctgcagcag cagaaggagg 4080 ccctcgagaa ggcgctgagg caggtttcca aggacgcttt ccagctgcaa gtagacctag 4140 acgccgacct aggcagattc ttcgggaagc tggggatagc tccacgtcag tgatcgttct 4200 ctctggacct agcaacgtgc ttaagtgctt caggtaccgg gcaaagcaaa tgcacaaggg 4260 ctgcttctgc atgattagca ctacatggta ctgggcaggg gacgggtctg aaaggattgg 4320 aaacgcgagg atacttgtga ctttttcaag caactcacaa agggctgaat ttctggaccg 4380 cgtgcggttg ccctcctcag tgaccttgct agactccatc cacaccttct agccacgcct 4440 accagcgaaa aaaaaaactg agctgctgag tcagccattt gcggcagcca ttttgagact 4500 ttgatcttgt gtcctggaca tttccagcct ttgctgactt ttatttacca tacccccatt 4560 tttgtacttt tataacaaac taaccaagcg cgtatcggcc acctgacttg tcacctgttg 4620 acctgtcatg gtacgagcgc gcagaacaaa aagagcgtct gctgcagacc tctacaaaac 4680 ttgcaaagca gctaacacgt gtcctccaga tgttatcaat acctatgagc ataagacagt 4740 tgctgataaa attttgcaaa ttggaggtgc tgcagtattt tttgggggac tcggtattgg 4800 tacaggggct ggaaaagggg gcgccacagg atatacacct ctcggtggga gggtgtcttc 4860 cggggtcact gttggtacgg gtactcgtgt tgtacggcct cctgtaccca ttgatgtgct 4920 tggcgcaagt gaggtggtac ccgtggatgc acttgcaccg tctgtggtcc ccctgcatga 4980 ggcagttcct gaaatacctc ttctggagat tacccctgga gagcccactg gcttgccgac 5040 tgttccttta gaggtccctg tggacacttc ggggtcttcc tttgatgccg gtcctgtgcg 5100 tgtcacggta cacgcagtgg tagagccagt accaagcacc cccccagtca gaactagtgt 5160 cagctggtca cagcactcca atccagcgtt tgatatactg cctgacagca ataacagtct 5220 tggtgagacc tcctcctcca gtaacatctt ggtcacccat agtaacggtg gtgtttctgt 5280 tggggtctcc gaggagattc ccttacaagt gtttcgcaca agcactcctc gcagcactcc 5340 tgtacggcct gcaactgcta gacggggggg gtatcctcgc aggttcattg aacaggtaga 5400 catttcagac ccgggggtgc ttgaggaccc cggacgacgt gtgcagtttg attttgataa 5460 cccagctttt gagggcacac tggaatttga accccctccg tacccagagg tccgagctgc 5520 ccctgaccct cgatttcgag acatactaaa gctctcttct acccggtatg gccaaacaga 5580 gtcgggtcat gtgaggatag caagaacagg aatacggggc acaatcacca cacgcagtgg 5640 tgtgcaattg gggtctcagg cacattttta ccatgacata agcaccttga cagtccctga 5700 ggaaattgaa ctaacagcac ttggagagca ttctggaacc acagtggtag tttcgggggg 5760 tggttcagaa tctgcaatgg aggtgattga tctggacagt tctagctttt catctatagg 5820 tcttgactct gatgacctgg aagctttact tggtgttgag gaccttccag catttgaaaa 5880 tctcaggctg gaatttccta tgagacgtaa cagggtgacc cttgacctac caacaaggaa 5940 tctggctatg cctgggcctc tagacataaa ccaggaggtt tatgtagatt acccgggatc 6000 tgattctggg ggcgtgtatg gcccctttgg acctgagcct cctctggtta ttgcagacat 6060 aacgatgggg gagggtactg attactatct acacccctct ctcacacgta aacgcaggcg 6120 ccgtcgcagg cgcaggtcac tgtgatcttt tcttttttct ttacagatgg ccgtgtgggt 6180 ttcaaacagc cagaagcttt tcctgccccc taaccctgtt tctaaggtct tgcacactga 6240 cacttatgtt aaaagaacat ctgtgttttg tcatgcaggt tctgatagac ttctgacagt 6300 aggaaaccca ttttttagta tattagatga ggaccaaaaa actgtcaagg ttcctaaggt 6360 ctccagtaat caatataggg tatttagggt atctctccct gacccaaacc aatttgcatt 6420 tgcagagcgt cccacgcatg atcctgaaaa ggagagactt gtttggggcc tccgtggtat 6480 ggatgttggt cgtgggcaac cgttgggaat tggggtgaca ggccaccctc tttttaatag 6540 attctcagat gtggaaaatc ctggtaagta tcaggacaag gcccagccca aggattcaag 6600 acagaatgta ggttttgatg caaagcaaac acaggtttta atagtgggat gcacaccggc 6660 catgggtgaa cactgggaat ctgcacccgc ctgtaatggt gcagttaaag gctcctgccc 6720 ccctctcgag ctgcgtaaca cagtaattca ggatggtgac atgcttgaga taggttatgg 6780 tgcgatggac tttagaaacc tctccagaaa caggtccgat gcacctttgg acatcatact 6840 ttccatctcc aaatatccag attaccttaa aatgagtaag gaggctagcg gtgactccat 6900 gtttttcttt gcacgcaggg aacaggagta cattaggcac ttttttacca gggaaggtaa 6960 ggttggggag gatgtcccag aggccctgat gtatcctgcc gatgacagtc agcctcaaaa 7020 aactaattta ggcacccctg tttattatgg ggctcctagt gggtccctta catctagtga 7080 ttctcagata ttcaaccgtc catactggct tcagcgctct cagggcctga acaatggtat 7140 ttgctggctc aatcagttgt ttgtcactgt tggtgacact acacgtggca caaatatgac 7200 aattagtgta tctaatgagg ctgaccccga gaagtacgac tcctccaagt tcagcgtgta 7260 tcttcgccat acggaggagt tcgaactctc attcatcttt cagctatgca ttgtccccct 7320 aactccggat gtgattgccc agttacatag cctgaatcct cttatacttg acaaatggaa 7380 tataggcctg cagccaccca ctgcaacatt gttggaggac aagtataggt acatagactc 7440 tcttgctacc agatgtccca gcaaggttcc ccctaaacct tctgaggacc cctacagtgg 7500 ccttactttt tggatggttg atcttacaga aaagttctca caggacctgg atcaatttcc 7560 tctgggacgt aagtttttag ctcaatctaa tctatccacc actcggaagc gcgcgcggtc 7620 cccctctact tctaaatcta cacgaactgt aaaaaagaaa aagagcaaat aaacacattt 7680 tattttttct ctgtgcgtga gcatgctcat gtttttgcaa agctctgtca gcactcttac 7740 agtggttcgg gcccccttcc agcattcctc ggtcaaccgc acccggttgc gcccgggtga 7800 ctaaaaccgt 7810 //