ID EU727537; SV 1; circular; genomic DNA; STD; PRO; 3869 BP. XX AC EU727537; XX DT 17-JUN-2008 (Rel. 96, Created) DT 29-DEC-2008 (Rel. 98, Last updated, Version 2) XX DE Alpha proteobacterium endosymbiont of Amoeba proteus plasmid pAP3.9, DE complete sequence. XX KW . XX OS alpha proteobacterium endosymbiont of Amoeba proteus OC Bacteria; Proteobacteria; Alphaproteobacteria. OG Plasmid pAP3.9 XX RN [1] RP 1-3869 RX DOI; 10.1016/j.plasmid.2008.09.007. RX PUBMED; 18951917. RA Park M., Kim M.S., Lee K.M., Hwang S.Y., Ahn T.I.; RT "Characterization of a cryptic plasmid from an alpha-proteobacterial RT endosymbiont of Amoeba proteus"; RL Plasmid 61(1):78-87(2009). XX RN [2] RP 1-3869 RA Kim M.S., Park M., Lee K.M., Hwang S.Y., Ahn T.I.; RT ; RL Submitted (19-MAY-2008) to the INSDC. RL Department of Biological Sciences, Seoul National University, San 56-1 RL Sillim-Dong, Kwanak-Gu, Seoul 151-742, Korea XX DR RFAM; RF01691; Bacillus-plasmid. XX FH Key Location/Qualifiers FH FT source 1..3869 FT /organism="alpha proteobacterium endosymbiont of Amoeba FT proteus" FT /plasmid="pAP3.9" FT /host="Amoeba proteus" FT /mol_type="genomic DNA" FT /db_xref="taxon:538945" FT CDS 661..1941 FT /codon_start=1 FT /transl_table=11 FT /product="Mob" FT /note="involved in mobilization" FT /db_xref="GOA:B3VBH1" FT /db_xref="InterPro:IPR001668" FT /db_xref="UniProtKB/TrEMBL:B3VBH1" FT /protein_id="ACE62909.1" FT /translation="MSMSVSLKKATNKTNIRHNNRTMSEKEKEQNSHIDYSRSDENKYL FT VQKDLKKLYREEFGEVLENYNAKQKRNDRKIDDYYKHIQSSKKTSLQQEMIIQVGDKDD FT FSSKQDFEKANEILEEWLLGFEKRNPNLKIYNAVIHNDEASPHMHLNFVPVASGYKRGL FT EKQVSFDRAITQQDPKLDKTRPFDDWREKEVKILEEMLKERGIERKLVGSNNYKDVNEY FT KEKKDLEKEILSLENQLFEKKNELLEMNERLPGEIKIKAEREKKTEVVNKGFLKKEKVE FT KPTGNWIVETKELKRVQGIINAGYSVKKDYDRLQRMDLVKENKELCDKVDSLAEGYVKA FT INENTDLENENRELRKEISSLKAHIRDLKENVKVLYHNTKKLLGRQFEGFRGLIKNELD FT MKGIDNQFEREHKKEMKTKQRGYDMER" FT CDS complement(1978..2520) FT /codon_start=1 FT /transl_table=11 FT /product="Rep" FT /note="involved in replication" FT /db_xref="GOA:B3VBH2" FT /db_xref="InterPro:IPR008813" FT /db_xref="UniProtKB/TrEMBL:B3VBH2" FT /protein_id="ACE62910.1" FT /translation="MDKNSQEKITIELNADEFKKLQKLLELDEKNEQDQQKKESEKKNL FT NFIQLYRDNMPELRWLMANHNFASSLLFFIIEHMDNKNALACSYSTFEDYFGKSKMTIY FT RGIKVLEENGFLSVLKMGTSNVYLVNEDLAWTDSNDKKKFTKYDGKILVSKKENKDYIY FT RKQFDRFKALRKRENLK" FT CDS complement(3150..3740) FT /codon_start=1 FT /transl_table=11 FT /product="PGPase" FT /note="phosphoglycolate phosphatase" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:B3VBH3" FT /protein_id="ACE62911.1" FT /translation="MNILWDFDGTLFNTYPAYTKILSLVLGEEIDKQEIYKKLKISYSH FT ALDYYNVSSDQKEKIKSLKKELSPKDMKPFDGVEEILKFADKNVIMTHKHRDGVLAILK FT YYGWDKYFVDMVTIDNGFPRKPNPSAYTYLHQKHKIDLAIGDRELDLLPAKELGIITCM FT FQGQSDVADYYLNDYSEFFNKGIPLSKQLYLQQ" XX SQ Sequence 3869 BP; 1291 A; 639 C; 702 G; 1237 T; 0 other; ctattcccac aaggaatccg cctttgtctt tttctatgat tctatgcatt tttttataca 60 ttcctattat ggcgggcttt tcggcctccc catagttccc tatgtcttcc gattttttgc 120 ataaaatctt gcatactctt agcgtggttt ttttcaaaat gctggtggta ctccttaata 180 acaagttcat agaatgttga ttttataaat caaaagagag gggaacctat gtagtgctac 240 ttgagtagaa aattaggttt ttaattaggt agaggtagct gcatagcgtg tgtcaacggt 300 accggaccga acccgtaagg gggcgggagg ataaggagtt gacacactca ctatgcaacc 360 ctcttgtggt tgtcaaaagg tacccttttg actctgccaa ccggcgaggg agcccctcaa 420 ggattgaggg gttggggagt tggattaagg gggtctgggg aagagttccc cagcaggttt 480 ggacagagtc caaggttttg ttttttgtca tgcaaagcat ggcttggcga tagccaaaac 540 agcctcgcag agccttttca ttgtgtacat ggagcgtagc ggaatgtcac aatacagaaa 600 aggttacttt gccaaggtaa caaagctttt ggtatagtgg aaccaaggag ttgattcgtt 660 atgagtatgt cagtttctct caagaaggca acgaacaaaa ccaacattag acacaataac 720 aggacaatga gcgagaagga aaaagagcaa aattcgcaca tagattattc aaggtctgac 780 gaaaataaat atcttgttca gaaagattta aagaaattat atcgagaaga atttggagaa 840 gtgttggaga actataacgc caaacaaaaa cgtaacgacc gaaaaattga tgactattat 900 aaacacattc agtccagtaa aaaaacatca cttcagcaag aaatgattat tcaagttggc 960 gataaagatg atttttctag taaacaagat tttgaaaagg ctaacgaaat tttagaagaa 1020 tggttattgg gatttgaaaa acgaaatcca aatttaaaaa tttataacgc agtcattcat 1080 aatgatgaag cgagcccaca catgcatttg aattttgttc cagtagcaag cgggtataaa 1140 cgtggacttg aaaagcaagt atcatttgac cgagcaatta cgcaacaaga tccaaaatta 1200 gataaaactc gtccttttga tgattggcga gaaaaagaag tgaagatatt agaagaaatg 1260 ttaaaagagc gtggtatcga acggaaatta gttggttcaa ataattataa agatgtgaat 1320 gaatacaaag aaaaaaagga tttagaaaag gaaattcttt ctttggaaaa ccagcttttt 1380 gaaaagaaaa atgaattact ggaaatgaac gaacgattgc caggagaaat taagattaaa 1440 gctgagagag aaaagaaaac agaggttgtt aataaaggtt ttttaaaaaa agaaaaagta 1500 gaaaaaccaa cagggaattg gattgttgaa actaaagaat taaaaagagt gcaaggaata 1560 attaacgctg gatattcagt gaaaaaagat tatgatcgtt tgcagcgtat ggatttagtt 1620 aaagaaaaca aagaattatg tgacaaagtt gatagtttag ctgaaggtta tgttaaagct 1680 attaacgaaa atacagattt ggaaaatgag aatagagaat tgcgtaagga aataagctcg 1740 ttaaaagccc atataagaga tttaaaggaa aatgtaaagg ttttatacca taacacaaaa 1800 aaactcttag gaaggcaatt tgagggcttt agaggtctta ttaagaacga gttggatatg 1860 aaagggatag ataatcaatt tgagcgtgaa cataaaaaag aaatgaagac taaacaacga 1920 gggtatgaca tggagcgatg aaaacataaa taaagcgagt agactttact acccgcttta 1980 ttttaggttt tcccgttttc gcaaagcttt aaatctatca aattgtttac gatatatata 2040 gtctttattt tcttttttgc tgactaagat tttcccgtcg tattttgtaa attttttctt 2100 gtcgtttgaa tcagtccacg ctaaatcttc atttactaaa taaacatttg atgtacccat 2160 ttttagtaca ctcaaaaatc cgttctcttc aagtactttg attcctctat aaatagtcat 2220 ttttgatttt ccaaagtaat cttcaaaagt tgaatatgag catgctaatg cattcttgtt 2280 atccatgtgt tcgattatga aaaataaaag agaactagcg aaattgtggt ttgccattaa 2340 ccatcttagt tctggcatgt tatctcgata aagttgaatg aaattaagat tctttttttc 2400 actttctttt ttctgttgat cttgttcatt tttttcatct agttctaata atttttgaag 2460 ttttttaaat tcatccgcgt ttaattctat agtgattttt tcttgggagt tcttgtccat 2520 ttttccaccc cttttttgca agaaggtatc acactatgat acctatatgt ataatctttg 2580 ttatatccta taacatgacc tgatatatgt aaagacaaat ttgttatatt cttctacaaa 2640 taggtatcac aagctatgtt acctataggt atcacactat gatacctatt aaactctgaa 2700 acccttatat atcaaggctt ctcttacgtt ccctttctat atctcctaat agggtttttc 2760 tccacgcaat gggcaggtag tattttttga gaaacccact caaaaaatct ccaccttttt 2820 tccattgcat tccgaaattc ggctggtttt tagctttcgc caagccgaac agaccaaaaa 2880 cgaggttaag ttgcccgact tggaccagca attgtaccag ccgaaccacc cagttttatc 2940 gatctaagca ataagcttac tctatattca gttacgttaa gttcttaggg gctagcccct 3000 cgcttcgctt caccccagcc ttcaccactc cacccaaaaa caagacgatc gtttaaaata 3060 aaaaataaaa taagctgtcc atatggacag cttatttaca taaaattcga aagcggaagt 3120 caataaatct atcatatatc ttcagcgatt tattgctgaa gatacaactg ttttgataat 3180 ggaataccct tattgaaaaa ttctgagtaa tcgtttaaat aataatctgc tacatcactt 3240 tgaccttgaa acatgcatgt tatgattcct aattcttttg caggtagcaa atctaattct 3300 ctatctccaa tagctagatc aattttgtgt ttttgatgca agtaagtata tgctgatggg 3360 ttgggtttgc gaggaaaacc attatcaatc gtaaccatat ctacaaagta tttgtcccat 3420 ccataatatt ttaaaattgc taaaactcca tctctgtgtt tatgtgtcat gattacattc 3480 ttatctgcaa atttcaaaat ttcttccacg ccatcaaatg gtttcatgtc ttttggagac 3540 aattcctttt ttaagctttt aattttctct ttctggtcac tagaaacatt atagtagtct 3600 agtgcatgtg agtatgaaat ctttaatttt ttataaatct cctgtttatc tatctcttct 3660 ccaagtacta gagagagtat tttggtatag gcaggatatg tattaaaaag tgttccgtca 3720 aagtcccata aaatattcaa ttaaatcacc ctttctattc cattttatca caagaatgtg 3780 gtagccatac tcttgttttc tttgtatact ccatacacta tcagttaaca taacgtctca 3840 ttatcggtag tgaagacaaa ggcggatcc 3869 //