ID EU715328; SV 1; linear; genomic RNA; STD; VRL; 7510 BP. XX AC EU715328; XX DT 31-DEC-2009 (Rel. 103, Created) DT 21-OCT-2010 (Rel. 106, Last updated, Version 2) XX DE Armigeres subalbatus virus SaX06-AK20, complete genome. XX KW . XX OS Armigeres subalbatus virus SaX06-AK20 OC Viruses; dsRNA viruses; Totiviridae. XX RN [1] RP 1-7510 RX DOI; 10.1099/vir.0.024794-0. RX PUBMED; 20702653. RA Zhai Y., Attoui H., Mohd Jaafar F., Wang H.Q., Cao Y.X., Fan S.P., RA Sun Y.X., Liu L.D., Mertens P.P., Meng W.S., Wang D., Liang G.; RT "Isolation and full-length sequence analysis of Armigeres subalbatus RT totivirus, the first totivirus isolate from mosquitoes representing a RT proposed novel genus (Artivirus) of the family Totiviridae"; RL J. Gen. Virol. 91(Pt 11):2836-2845(2010). XX RN [2] RP 1-7510 RA Liang G., Zhai Y., Fu S.; RT ; RL Submitted (12-MAY-2008) to the INSDC. RL State Key Laboratory for Infectious Disease Prevention and Control, RL Institute for Viral Disease Control and Prevention, Chinese Center for RL Disease Control and Prevention, #100 Ying Xin St., Xuanwu Dis., Beijing RL 100052, P.R. China XX FH Key Location/Qualifiers FH FT source 1..7510 FT /organism="Armigeres subalbatus virus SaX06-AK20" FT /host="Armigeres subalbatus" FT /strain="SaX06-AK20" FT /mol_type="genomic RNA" FT /country="China:Shaanxi province" FT /collection_date="2006" FT /note="AsTV" FT /db_xref="taxon:556524" FT CDS 472..4914 FT /codon_start=1 FT /product="coat protein" FT /note="ORF1; structural protein" FT /db_xref="GOA:D2CSN1" FT /db_xref="InterPro:IPR001159" FT /db_xref="InterPro:IPR014720" FT /db_xref="UniProtKB/TrEMBL:D2CSN1" FT /protein_id="ACH85915.1" FT /translation="MERHHNSNAQNEYPNEILSSAVQPNNNVSWNYHKIDGASAPLYPQ FT PNGAETPDRLKVLRKYFTLSNVVLGAKIIIIGGVAFAGYKVAHGMYTWYEAISSPIAAL FT ETTVSTEYHTLQTKYGYQWYDYFCPKCMLYKFATHSGNATTAASHHNHIMHALNGNGEQ FT IHVIQIGNQIELTNTIAAMKFNVKLRSKNKVIVELVPLTAPSGDMATRNKTRHDQNNAI FT AILNQIASQGNDKRLPLYHSFIKTGSDDRPRFDVSMVFKNVTYVGLGGATKHAAKTKAA FT SAALIALHTSPELNGDQRATLSAWTRDLTKDGDVESNPGPRGLDLDFSYPNEETPPDMS FT NFVPYTSYSTHTNLKPFNDVENYDRDSAFAEDYVADEYKAHLAKRVEYENATGNYFNYL FT SSLLNLPTSNRFALLCVDDVDPEPCDDETETSTPEKQKPRPPKVARERKERPFVEKPVP FT VKKIEKTEEEKKTDRMFALKRIAGQLKQTPEKVFLWVKRKMSPVFKTTILDLVFGLNWQ FT EKTIMNQYEFAAYANLHDITDDELISTVINHDTKWASYSLQQKITLAKELNFSYVEAKS FT LSHNKEMHSANGNILSNTLSDVEEHDKAQNIVKYNQATLPQYRGIEAQVYITNVAGDTN FT PNFTRIFDQDRIRGNVVGAANNITNNCAVPLPMTCLIPRQVRPLVPGALVPALQRLRIT FT ELNTAEYYLNPIIATDLSKMISDQVKNNQSSNWRRDNNSLSGFSTFDIATINTALLPKG FT LTLESMLLKPDLLHSITSLRTNFTSINRSTFNAIDNNTVPSVGVSVTIGINNSPVFGED FT CGGNNPVFPWLGNKGSVAFHLTLASVPIDQRDDAIVMPPGLLQASYDASEAVAMFVMSW FT AEWPFGIYTATRPTTDTAGGNNQNQVFVPTQSLTRVAGRRTLNIVLPKRFAEAAPTSGP FT QANAQATLRPTAGPVAAAGAPPILAGQVLDINFVGGALIAYPLTDYLYTWATQFDATPI FT RQYIGRLGVLMGVKDTLLVAHEMNIALCQQYPKMVTGAGGVASPAPNSIPQFDLCYCNH FT TQVTTSVANFPLAADVRADYRIFETNPATWNKVCLGLATAPNLTPDEPVDIPYHLGNPS FT NAFWERLESVPMAASWALYYNLRGLTTLAWNNAYTNANSVWAQRMARETFCTTHVTGTI FT VPARYGRIPHDIMKSVYGRAPKTTQTSKGGTLIDISHFERWLPGAPFASVYTAAGVEVT FT GLTPTILADIWIQYPADNLPILAATFPPPFHRDSVQGFDSRNGLAIHRNMNNDLVSPYM FT EPDPRAFFDVNKGPVMNDFAVWNSRLWFTHPNRQILDYSGGAIAEVIPAAGTYPLGRGI FT PLLTGENVPPELANASTICIPRFSNAGQRIFLYVTQAQSVQLVGACNRSNRLMRSAWLL FT NDVYKAPDVQQWGRDEEDEFDTITKSYFLDVTTAGVDNATNQIPATLVNTNEQAVDVSQ FT LPSSANPSTTMEQPTSVAI" FT CDS 5145..7430 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /note="ORF2; deduced RNA-dependent RNA polymerase; FT nonstructural protein" FT /db_xref="GOA:D2CSN2" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:D2CSN2" FT /protein_id="ACH85916.1" FT /translation="MKDILCVVSQELKEEMKYYQHLDNILFTNIMIYGHIHGPSTIREL FT RELGMFNDFETFVTMAGKISGHFKRYPICKDETKQRLCEIQCLTGYLQNDPPGWDFEKE FT FVSLAEGGYEHGLVGEDWPARFKELNDKVMTRQPMPDFISFEDFIRDGLWITAGSSSIG FT KVEWTKTDDKGKFKARKNMLTELYTDEDLIEIVNNWDGILRSRVFTKDELSKRRLAVAS FT NIEAYLSEAWILHLFGHGFKNYEYITLDESPKRQHERTSKLINLLRNGSFCLPFDFKGF FT DHQPQIKAEVQVILQKIVDHVRTKVPKDKLATFNSIAVRMVESYAKGEIINPMTMEVLI FT QIGGIPSGVRPTSLIGNVWNGDMTTYARELTKLMMRRDEIEEIGIKGDDTYIASKNPVA FT LIIFRLAYAAVNAIGLDSKFGISQNICEFLRNEISINGCQGWSNRAIPSLSQRKPWNAQ FT PWSPSSEVATVANNIYLLERRLKRSTPQLHQANKIKWSKYTNQSYHWLHLPVRLGGFGL FT YPFEGWEPNGKLPLVAKPFITVNNLKISREYVPWAKLTPEQNILYAQEDFNSKIATDDI FT PGPQKYYSRDFVNILRTKTFSWTKEPTIIRIFPPKVQRPPVAEHVWWPRDRFVNQKSLD FT PTMPIFAEFIRQHQTLKRASGRMNIKVEPLPALAKKWYPHLWSSVEYFEANGWHRTDAI FT NLAIGNIPTEPTKILHPSLTAFVKESVKRNNFRYWKGRRNIALNLYTITTLAVHEIQAT FT GGKHLYAY" XX SQ Sequence 7510 BP; 2239 A; 1815 C; 1672 G; 1784 T; 0 other; gaagtagaag aggagacctg atcttctact tcacaagatc atccggattt ccttgtaatc 60 catcaatcag gcacaaacaa gcttactttg atctgttttt aaagagggta cagatgactt 120 cgctctcctc gttggacggg agagactctg acctattttg acataactat atctttgatt 180 ttgtatttat cacttgcctc tagtcctagg gatgtcgtgt gttggtcatg acctgtcgta 240 gcacgaatac ttatgatgga tgtaggaggg gaaagcatag atgcagatga ttaactactg 300 gtgtgatgag ttggtgatac cctgccagta gggatagaca ttattaatga atagcgagga 360 tggcatccga ggccacttaa tctgcagtga atgtttgtgg acgtgtgtta ttgatgctgg 420 aaagcatgga aatttgagaa ccagggtgac ttctggaaag acagacggct gatggaaaga 480 catcacaata gcaatgctca aaatgaatac ccaaacgaaa ttctctcgag cgcagtccaa 540 cccaacaaca acgtttcgtg gaactaccac aagatagatg gagctagcgc tcctctatac 600 ccgcaaccaa acggtgccga gacccctgac cgtttgaagg ttctgcggaa gtacttcaca 660 ctatcaaatg tcgtgttagg ggcaaaaatc atcattatcg gcggagttgc ttttgccgga 720 tacaaagttg cacacggaat gtatacctgg tatgaggcaa tctcgtctcc gatagcagca 780 cttgaaacta cagtatcaac cgaataccac actctccaaa caaaatatgg ctaccaatgg 840 tatgactatt tctgcccaaa atgcatgctt tacaaatttg ccactcatag tggaaacgct 900 accacagcag cttctcacca caaccatatt atgcacgcgc tcaatggcaa tggagaacaa 960 attcacgtca tacagatagg aaaccaaatc gaacttacaa acacgattgc cgccatgaaa 1020 ttcaacgtca aactcaggtc taagaacaaa gtgattgttg aacttgtccc acttacagct 1080 ccttctggcg atatggctac ccgaaacaaa acacggcatg accagaataa cgccatcgct 1140 atactgaacc aaatcgcatc ccaaggcaat gacaagcggc taccactgta tcacagtttt 1200 atcaaaacag gatcggatga caggccgagg ttcgacgtgt cgatggtatt caaaaatgta 1260 acctacgtag ggctgggggg tgctacgaag catgcagcta agactaaagc agcgtctgct 1320 gccctcatag cattgcatac atcacccgag ctcaacggcg accaaagggc gacgttaagc 1380 gcctggacac gcgatttgac caaagacggc gacgttgaga gcaatcctgg acctagagga 1440 ttggatttgg atttttccta cccaaatgaa gagactccac ctgatatgtc caacttcgta 1500 ccatacacga gttactccac acatactaac ttaaaacctt tcaatgacgt ggagaactac 1560 gaccgagact ctgctttcgc tgaggattac gttgctgacg agtacaaggc tcatcttgcc 1620 aagcgcgtgg aatacgagaa tgcgacaggc aactacttta actatttatc tagtctgctg 1680 aacttaccaa cctccaaccg attcgccctc ctgtgtgttg atgacgtaga cccggagcca 1740 tgtgatgacg aaacagaaac aagcacacca gagaagcaaa aacctcgacc tccaaaagtt 1800 gctagggagc ggaaggaaag gccatttgtc gagaagcctg ttcctgtcaa gaagatcgaa 1860 aagacagaag aagaaaagaa gactgatcga atgttcgcgc tcaaaagaat agctggccaa 1920 ctgaaacaga cccccgaaaa agtgtttctc tgggtaaaaa gaaaaatgag tcccgtgttc 1980 aagacaacaa tattagatct ggtatttggt ctgaactggc aggagaaaac catcatgaac 2040 cagtatgaat ttgcggccta cgccaaccta cacgacatta ctgacgatga gttaatctca 2100 acagtcatca atcacgacac gaagtgggcc agctattccc tccaacaaaa gatcacattg 2160 gctaaagaac taaacttttc ctacgtcgaa gccaaatccc tctcccataa caaggagatg 2220 cactcagcta acggcaacat cctgtccaac accttatccg atgtcgagga acatgacaaa 2280 gcccaaaata ttgtcaaata taatcaagcc acactaccac agtaccgcgg aatcgaagca 2340 caagtgtata taacgaacgt ggctggtgac accaacccta attttacgcg aatttttgat 2400 caggaccgga tccgtggtaa tgtcgttgga gcagctaata atatcacaaa taattgcgct 2460 gtcccccttc caatgacttg cctcattcca cgccaagtta gacctctggt accgggcgcg 2520 ctagtcccag cgctgcaaag gttgcgtatt actgagttaa acaccgctga atattatttg 2580 aatcctatca tagcaaccga cttatccaaa atgatttccg atcaggtcaa gaataatcaa 2640 agctccaact ggcgccggga taacaactct ctatcgggat tttcgacctt tgacatcgca 2700 accatcaaca ctgccttgct acctaaaggc ttgactttag aatccatgct gttgaagcct 2760 gacttgttgc attccataac ctcactaagg actaacttca catctattaa ccgttcaacc 2820 ttcaatgcta ttgacaacaa taccgttcca tctgtcggag tcagcgtaac tatcgggatc 2880 aacaactccc ctgtatttgg agaagactgc ggaggtaaca accctgtgtt tccatggttg 2940 ggaaacaagg gcagtgtcgc atttcatctt accttggcat ccgttccaat tgatcaacgt 3000 gatgatgcaa tcgtcatgcc tcctggcttg ttacaagcgt cttatgatgc gagcgaagcg 3060 gtagcaatgt tcgttatgtc atgggcggag tggccctttg gcatctacac tgcaactaga 3120 ccaacgaccg acaccgccgg agggaacaat caaaatcagg tgtttgtccc cactcaaagt 3180 ttgacacgcg tagcagggcg gaggacactc aacatcgtgc tacccaagcg gttcgctgag 3240 gccgctccca catctggacc ccaggcaaac gctcaagcca ctcttcgacc aactgctggg 3300 cccgttgctg cggccggtgc accaccaatt ttggctgggc aagtgcttga catcaatttc 3360 gttggcggag cactaatagc ttaccctctt accgactacc tgtacacatg ggctactcaa 3420 ttcgacgcaa caccaattag acaatacatt ggcagactgg gagtgttgat gggagtgaag 3480 gatacactgc tcgtagctca tgagatgaac attgctctgt gtcagcaata ccctaagatg 3540 gtgactggag ccggaggtgt tgcctcgccc gctcctaatt ccataccaca gtttgatttg 3600 tgctactgca accacactca ggttaccacc tctgtagcta actttccttt ggctgctgat 3660 gttcgagctg actaccggat ctttgaaact aatcctgcaa cttggaacaa ggtgtgcttg 3720 ggtctggcaa cggcacccaa cctaacacct gatgagccgg tagatattcc ttaccacctg 3780 ggcaatccct cgaatgcatt ctgggaacgg cttgagtctg taccaatggc cgcttcttgg 3840 gcactctact ataatctgcg cggtctcacc accttggcgt ggaataatgc gtatactaat 3900 gccaacagcg tgtgggctca aaggatggct agggaaacat tctgcacaac tcatgtcaca 3960 ggaaccatag tgccagccag gtacggcaga ataccgcatg acataatgaa gtctgtatac 4020 ggccgagctc caaaaactac tcaaaccagc aagggcggca cactcatcga tatttctcac 4080 ttcgaacgct ggttaccggg cgccccattc gcgtcagtat acacagccgc aggtgtggag 4140 gtgactgggc taacaccgac aatcctggct gatatctgga ttcagtatcc agctgacaat 4200 ttgcccatct tggctgcaac tttcccacct ccatttcacc gggattctgt ccaagggttt 4260 gactcacgaa acgggctcgc aatccacagg aacatgaaca acgatctggt atctccgtat 4320 atggagccag accccagagc cttcttcgac gtgaacaagg gacctgtcat gaacgatttc 4380 gcagtatgga attcaagact gtggtttacc catcctaaca gacaaatcct tgactattca 4440 ggaggggcta tcgctgaagt gattccggcc gcgggtactt accccttggg acgcggcatt 4500 ccactgttga caggggagaa cgtccctcct gagcttgcaa atgcttcaac aatctgcata 4560 cctcggttct cgaacgctgg acagcggata tttttatatg tcacacaggc acagtccgtc 4620 cagttggtgg gggcatgcaa caggtctaat cgactaatgc gcagtgcttg gctgcttaac 4680 gatgtgtaca aggcacccga tgttcaacaa tggggcagag atgaagagga cgaatttgac 4740 actattacca agagctattt tttagatgta acgaccgcag gtgtcgacaa tgctacgaat 4800 cagatacccg cgacattagt aaatacgaac gagcaagcgg tggatgtatc acagctgccc 4860 tcttcggcaa atccatcgac tactatggaa caaccgacat cggtcgcaat ctagaagaaa 4920 tactcaaatt aaaggacaag cctttgacag ccaggctgca agaaagactc acttctttaa 4980 ccgacggatt ggtcaagttt gacgagatta attggacagg agcattacag tggattaaga 5040 acaatttgcc cgcagtgaac acaacaatta agggtgagtt agaaccatcg gacgatacaa 5100 tagaccctcg tgtgaaagga gatctagcca tcagacggct aaggatgaaa gacattctgt 5160 gtgtcgtatc tcaagagctt aaggaggaga tgaaatatta ccaacacctt gacaacattc 5220 tgtttaccaa catcatgatt tatggtcaca tccatggacc ctcaaccatt cgagaattgc 5280 gagagctggg catgtttaac gactttgaaa cgtttgtcac aatggctggg aaaatttcag 5340 gacatttcaa aagatacccc atttgcaagg acgaaacaaa acaaaggttg tgcgagattc 5400 aatgtcttac tgggtaccta cagaacgacc cacccggttg ggatttcgaa aaagagtttg 5460 tatcactagc agagggtgga tatgaacatg gtttggtggg agaagactgg cctgctcgat 5520 ttaaggaatt gaacgataaa gtgatgacac gacagccaat gcctgacttc atatcgtttg 5580 aggacttcat tcgtgacgga ctgtggatta ctgccggatc atcgtcaatt gggaaagtgg 5640 aatggaccaa aacggacgac aagggtaagt tcaaggcccg aaagaacatg ctgactgaat 5700 tgtacactga cgaggatctg attgagatcg tgaacaactg ggatgggatt ttgagatcaa 5760 gagtgtttac gaaggatgaa ttgtctaagc gacgtcttgc tgttgcatcg aacatcgagg 5820 cttacctgtc agaagcctgg atcctacatc tatttgggca cggttttaaa aactacgaat 5880 acatcacctt agacgaatcg cccaaacgtc aacatgagcg aacatccaaa ctaattaact 5940 tgctgagaaa tggttctttc tgcctaccat tcgatttcaa agggtttgat caccaaccac 6000 agattaaagc tgaagttcaa gttattttgc aaaaaattgt cgatcatgtg cgaaccaaag 6060 ttccaaagga taagctggcc actttcaata gtatagctgt gcggatggtt gaaagctacg 6120 caaaaggaga aattatcaat ccaatgacaa tggaagtgct gatacaaata gggggaatac 6180 cgtctggtgt gcgtccaact tcattgattg gcaatgtttg gaatggagac atgaccacct 6240 acgctcgcga gttgaccaag ctcatgatgc ggcgtgacga gatagaagaa attggcatca 6300 aaggcgacga tacatacata gcatcaaaga accccgtcgc tttgataata ttcagactgg 6360 cttatgcagc agtcaatgcc attggtttag attcaaaatt tggaatatca caaaacatct 6420 gcgaattttt gagaaacgag atatcaatta acggttgcca aggatggtcc aatcgagcta 6480 taccatcatt atctcaaaga aaaccatgga atgcacaacc ttggtcaccc tcttccgaag 6540 ttgcgaccgt cgctaataat atttatttac ttgaacgtcg actgaaacgc agcacaccac 6600 aacttcatca agccaacaaa atcaaatgga gcaaatatac caatcaatca tatcattggc 6660 ttcatcttcc ggttcgactc ggaggttttg gactgtatcc gtttgagggg tgggaaccta 6720 atggcaagct accacttgtc gcgaaaccct tcataacggt gaacaatctc aagatctccc 6780 gagagtacgt accttgggca aagctgacac cagaacagaa tatcttgtac gctcaggaag 6840 atttcaacag caaaatagcc acagacgaca tcccaggtcc gcaaaaatac tactcgcgtg 6900 atttcgtgaa cattctgcgt actaaaacat tctcatggac caaagaacca accataattc 6960 ggatttttcc accgaaagtg caacgtcctc cggtcgctga acacgtttgg tggcctaggg 7020 acagatttgt caatcaaaaa tctctcgatc caacaatgcc tatatttgcc gagtttatca 7080 gacaacatca aacactcaaa cgagcatcgg gtcgtatgaa catcaaggtc gagccgcttc 7140 ccgcacttgc taaaaagtgg tatccacact tgtggtcaag tgtcgaatat tttgaagcga 7200 atggctggca tagaaccgac gcaatcaatc tggcaatcgg caacatacca actgagccga 7260 caaaaatatt acacccttcg ctgaccgctt ttgtgaagga aagtgtcaag cgaaacaact 7320 ttcggtattg gaaaggtcga cgcaacattg cgctaaattt gtacactata acaacactag 7380 cagtacacga aatacaggca acaggcggca aacatctgta cgcctactag gtaagactca 7440 tgaccatcag tgagcaccat actagagaac cctataacat cgatatgcag ttgcatactc 7500 ttctagccta 7510 //