ID EF015591; SV 1; circular; genomic DNA; STD; PRO; 6823 BP. XX AC EF015591; XX DT 29-OCT-2006 (Rel. 89, Created) DT 13-JUN-2007 (Rel. 92, Last updated, Version 3) XX DE Bacillus coagulans plasmid pMSR0, complete sequence. XX KW . XX OS Bacillus coagulans OC Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. OG Plasmid pMSR0 XX RN [1] RP 1-6823 RX DOI; 10.1016/j.plasmid.2006.11.006. RX PUBMED; 17215040. RA Rhee M.S., Kim J.W., Qian Y., Ingram L.O., Shanmugam K.T.; RT "Development of plasmid vector and electroporation condition for gene RT transfer in sporogenic lactic acid bacterium, Bacillus coagulans"; RL Plasmid 58(1):13-22(2007). XX RN [2] RP 1-6823 RA Rhee M.S., Shanmugam K.T.; RT ; RL Submitted (20-SEP-2006) to the INSDC. RL Microbiology and Cell Science, University of Florida, Museum Rd, RL Gainesville, FL 32611, USA XX FH Key Location/Qualifiers FH FT source 1..6823 FT /organism="Bacillus coagulans" FT /plasmid="pMSR0" FT /strain="P4-102B" FT /mol_type="genomic DNA" FT /db_xref="taxon:1398" FT CDS 27..392 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF-1" FT /db_xref="InterPro:IPR006339" FT /db_xref="InterPro:IPR007159" FT /db_xref="UniProtKB/TrEMBL:A0FJX4" FT /protein_id="ABJ99979.1" FT /translation="MGVLNGKTKRRVKISKQRQINIPKDFYEALNFSDEAFIEYNGKEI FT VIRPAGDEVVDFSEDILRDLIAKGLSGEKLLEQFRLIKSEIPHALERLKQEAMERPSFE FT GSLSDYLDAVGEDETDE" FT CDS 376..696 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF-2" FT /db_xref="InterPro:IPR007712" FT /db_xref="UniProtKB/TrEMBL:A0FJX5" FT /protein_id="ABJ99980.1" FT /translation="MKQMSNLLPFRLSKVAEKNLKKIKKTDRILFEKIEIAIETIREDP FT DVGDRKLGDLEGYFCVNVHHLRVEYRICYTVEEDENGDLVVIIMIGPRENFYRDLKRYL FT SF" FT CDS 764..931 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF-3" FT /protein_id="ABK33449.1" FT /translation="MVITDKKQLDDAISYAMHSLYLEGFNVTADVEKNVRAVLTGQLSM FT KELLEKIKGA" FT CDS complement(1036..1422) FT /codon_start=1 FT /transl_table=11 FT /product="TnpV" FT /note="ORF-4" FT /db_xref="UniProtKB/TrEMBL:A0FJX6" FT /protein_id="ABJ99981.1" FT /translation="MKNTLTYFKNKKGQLIPEIQTSNDPKYARPLGKWGKMALKYLQET FT NPIRFMELQMNGTLQEKMHKINDQAADKFLLIFDQLVEKDPAPITEDVLVKTRHLNHLK FT LQAEEFVRNEIYESLASQIPNDPY" FT CDS 1873..2307 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /note="ORF-5" FT /db_xref="GOA:A0FJX7" FT /db_xref="InterPro:IPR002145" FT /db_xref="UniProtKB/TrEMBL:A0FJX7" FT /protein_id="ABJ99982.1" FT /translation="MKKNTGFRLGEDTLKKLDEYCKQTNSKKVEIVEAAINQFIDNDGQ FT VKDALTIKLETICEQTIKKVIKEKVAPDLSRIRAAANNADLYTQVTVELLNHQFMNLDK FT ESLITTDIKVSPALGKAIFVAKERIHNYRMKKLEQEKKKK" FT CDS 2686..3204 FT /codon_start=1 FT /transl_table=11 FT /product="putative DNA-binding protein" FT /note="ORF-6" FT /db_xref="GOA:A0FJX8" FT /db_xref="InterPro:IPR009061" FT /db_xref="UniProtKB/TrEMBL:A0FJX8" FT /protein_id="ABJ99983.1" FT /translation="MSKYLTIAEIAELAGIPNSTCRRYLASFESFFLVRGGNRVKKYEE FT SAVKVLKRVKHLYEEGQDTNEIHDILRNEFPLVIDDDHEQGEAAKQPPGLATVEDIAGI FT RAALQEQKEFNKVLLEKLEKQQEYINSRLDQHDKLLMESLKESMEARKQIAATKNEKKS FT FWQRIFKRN" FT CDS 3360..3923 FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase" FT /note="ORF-7; putative resolvase" FT /db_xref="GOA:A0FJX9" FT /db_xref="InterPro:IPR006118" FT /db_xref="InterPro:IPR006119" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:A0FJX9" FT /protein_id="ABJ99984.1" FT /translation="MKYGYARVSTVHQDLEAQITALRNEGCEKIFQEKFTGTTRERPEF FT QKLLNTLKSGDTLVVTKLDRFARTAVEGIRTIKELFERGVKVHVLNMGLIEDTPTGRLI FT LNIMLAFAEFERDMIVERTAEGKAIARTKPGFREGRPKKFTKKQIEHAIMLKDKEGYSY FT KQVDELTGISKSTLIRAKRERGLI" FT CDS 3923..4129 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /note="ORF-8" FT /db_xref="UniProtKB/TrEMBL:A0FJY0" FT /protein_id="ABJ99985.1" FT /translation="MDLKEINERYEKIILSNTPQDEKDKQLAGLMSEMETDFNIPMLRR FT PEWERENRSVIALYRKIANSRKL" FT CDS 4988..5608 FT /codon_start=1 FT /transl_table=11 FT /product="Rep protein" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:A0FJY1" FT /protein_id="ABJ99986.1" FT /translation="MKKNNVVDFEKAEKNARLRDFEVEKKKFKQSYNDVSQEQLEEALQ FT VVSRATGKEHYIGTKKSSQSKVRFAQQLQENLGFLNKKKYLTGREKIFLQDIIPYIAFE FT TNCIVLDIKAKNPVPASITEIGELINSSRQNVSAVINSLKRKGIIAKAESGIEGNNAKA FT YAIFINPHVVYTGDKDNVNEALQVMFRKAMKMPVLRDLPDRLF" FT rep_origin 5772..6171 FT /note="double-stranded origin of replication" XX SQ Sequence 6823 BP; 2358 A; 1099 C; 1422 G; 1944 T; 0 other; cgactgtaga gaaggggaga aaaaccatgg gtgtgttaaa tgggaagacg aaacggcgtg 60 taaaaatatc gaaacagcgt caaatcaaca ttcccaaaga cttttatgaa gccttaaact 120 tttcggatga agcttttatt gaatacaacg gaaaagaaat tgttatccgc ccagccggcg 180 atgaagtggt ggatttttca gaggatattt tacgggattt aattgcaaaa ggattgagtg 240 gtgaaaagct gcttgaacaa ttccggctca taaaaagtga aattccgcat gcgctggaac 300 gtttgaagca ggaagcaatg gaacgcccat cgtttgaagg gagtttaagc gactacttgg 360 atgcagtagg ggaagatgaa acagatgagt aacctactgc cattccggct atcaaaagtc 420 gcagaaaaaa acctcaaaaa gattaaaaag acggatcgta tcttattcga gaaaattgaa 480 atcgccattg aaacgatcag agaagatccg gatgtcggag atcggaaatt aggagatttg 540 gaaggctatt tttgtgtaaa tgtccatcat ctaagggttg aatacaggat ttgctatacg 600 gtggaagaag atgaaaacgg tgatttagtg gtcattatta tgatcggacc gcgtgaaaat 660 ttctatcgtg atttaaaacg gtacttgagt ttttagattt ttggttggat cgtgtctcca 720 tggaactttg taaaaaaacc taagcataat gaggagtgat cttatggtta taactgacaa 780 aaaacaatta gatgacgcta tttcttatgc gatgcattcc ctttatctcg agggatttaa 840 tgtgactgct gatgttgaaa aaaacgtgcg ggctgtatta acaggtcagt taagtatgaa 900 agagcttctt gaaaaaataa agggtgctta atttatgatc agtcaatgtg ttgtttatcc 960 gggtactaat tttaatcggt tatgtacaat accccctatt aaaaaaattt aagtaccccc 1020 ccctattaaa tttttttaat aggggtcatt tggaatttgg cttgctaggg attcataaat 1080 ttcatttcga acaaattctt cagcctgtaa ttttaaatga ttgagatgac gggttttgac 1140 caacacatct tctgttatgg gagccggatc tttttccacg agttgatcga aaatcagcaa 1200 aaatttatct gcagcctggt catttatttt gtgcattttt tcctgcagcg ttccattcat 1260 ttgtaattcc ataaaccgga tcggattcgt ttcctgaaga tatttgagcg ccatttttcc 1320 ccatttccct aatggacgag catactttgg atcgttgctt gtttgaattt caggaataag 1380 ttgacccttt ttgttcttga aataagttaa tgtgtttttc attttagttt ccccttttga 1440 aggattttta tggatacctc attcgtttga tataaaaaac taccttttaa actagactaa 1500 ggttcgattg aaaagttgcc aaattaaatt cgaaaatgag catagcaact gcatagcaag 1560 actgcaaaat tgcattgcaa aagcatagct ttcgttttat aatgcatagt aagtgcatag 1620 cattttgatt ttttgcgata tcgctctaac atcaggctct gcctgatcta tcaccctggt 1680 gatagcatgt ttaccttatg ctcttgcagt ttaaaagggt tcgggaagta tttttcactc 1740 ttttgcgcgg aacttaaagt ttttcctata aaaactgaaa ggctacaagg aataaatttt 1800 tgaatgaatc tcagaaaaat tttgttccat tttaagtcat aatcttaaca aaatctagag 1860 aggaattttt gcatgaaaaa aaatacagga tttcgattag gagaagacac gttaaaaaaa 1920 ttagatgaat attgcaagca gacaaattct aaaaaagttg aaatagtgga agcagccatc 1980 aatcaattca ttgataatga tggacaagtt aaagatgccc taacaattaa acttgaaaca 2040 atttgcgagc agacaataaa aaaagtaata aaagaaaagg tcgcccctga tctttctcga 2100 ataagagcag cagcaaacaa tgcagactta tatacccaag taacagtcga attgcttaat 2160 catcagttta tgaatttgga caaggaatct cttattacaa ccgatataaa agtatctcct 2220 gcacttggta aagccatatt cgtcgcaaag gagagaattc acaattatcg aatgaaaaaa 2280 ctggaacagg aaaagaaaaa gaaatgatta atgttacctt aaaagtgttg tcggaaattc 2340 tgatcagaaa atgtggtgct gcgttagggg atgagaacat tggaaagtga ctacacgaag 2400 gactccttga aatttattcc gtatataggt gagtttgcca gaattaaagc aaaagcgtac 2460 ggaacttctt tattttattt agagggggat agcatcgtag aagaaaaacc agatggaacc 2520 aaggttgttg ttgagaagtt gataaagaac aatgagtaag ctcaattttt tttagcagga 2580 aatgagccac ctattgttta atttaagata atgaagaata acaaatgagt aaaggataat 2640 gccaaataaa caataatcat ttagcgtgaa aagcggtgaa aaatagtgag taaatactta 2700 acgattgccg aaatagcaga gctggcagga ataccaaaca gtacatgccg ccggtattta 2760 gcatcctttg aatctttttt ccttgtgagg ggcggaaacc gcgtgaaaaa gtatgaagaa 2820 tcagcggtta aggttttaaa acgggttaaa catctttatg aggaaggaca ggatacaaac 2880 gaaatacatg atattttaag aaatgagttt ccacttgtga ttgatgatga ccacgagcaa 2940 ggagaggctg caaaacagcc accgggactt gccacagtgg aagatattgc aggaatccgg 3000 gcagccttac aagaacaaaa ggagtttaac aaggtattac tggaaaagct ggaaaaacag 3060 caggaatata taaacagccg cttagatcag cacgacaaac tactaatgga atctttaaaa 3120 gaaagcatgg aagccaggaa acagattgca gcaacaaaaa acgaaaaaaa atctttttgg 3180 caacgaattt ttaaaagaaa ttagagcgtt aaccgcttgc ggtatggcgc ttttttaatg 3240 ctttctgccg ttaaaataga ttcaaaacct ataagtattg acacctaaaa gcaaaagtaa 3300 taaaatcaat gtatgggaag gtctcatatt atagtttcaa aagtgagggt gaaatttcta 3360 tgaaatacgg ctatgccagg gtatcaacag tacatcagga tttagaagcg cagataacag 3420 cattaaggaa tgagggttgc gaaaagatct ttcaagaaaa gtttaccgga acaacgagag 3480 agcgtccaga gtttcaaaag cttttaaata ccttgaaatc cggcgatacc ttggttgtaa 3540 caaaactgga ccgttttgcc aggacggcag tagaaggcat aaggaccata aaagaattat 3600 ttgaacgtgg cgtaaaagtg catgttttga atatgggttt aattgaagat acgccaacag 3660 gccgccttat tttaaacatt atgttagctt tcgccgagtt tgaaagggat atgatcgttg 3720 aacgtacagc tgaagggaag gcaatagcaa ggacaaagcc aggatttaga gaaggtcgcc 3780 caaaaaagtt tacaaagaag cagatagaac acgccatcat gctaaaggat aaagagggct 3840 attcatataa gcaagttgat gaactaacag gaataagcaa aagtacgttg ataagggcaa 3900 aaagagaaag gggcttaatt taatggacct aaaagaaatt aacgagcgat acgaaaaaat 3960 tattttatcg aacacgccac aggacgaaaa ggacaagcag cttgccgggc ttatgtcaga 4020 aatggaaacc gattttaata taccgatgtt gcgccgtcca gaatgggaac gtgaaaacag 4080 atcggtaatt gccttatatc gcaaaatcgc aaacagcagg aaattataag gtatagtgaa 4140 caatggcgag atgccaatac acatagaaag cggtggaaac catgtacaaa attataagcg 4200 acaaatacag cttggaagat acagctatga ataacgccgg taaagaacca gttttcaaaa 4260 cgattgaaga agcacaggcc catctcgaaa ctttaaaaca gtttttgccg caaggaaatt 4320 ttaagatcgt gaaaattaag tgatccggac cgaaagcgat attggaacac ggtttatagt 4380 ccgtcctatt aacaatggcc atgtcgcctg tatggcgacg ctcttttcgc tttatgcgaa 4440 aatgaaaggg gtggcataat cttggagcct ttgatttttg aggaagaagc atttaaaccg 4500 atagaagaat tgtggaagct gaaaacctat gaacttctgc tactgctgaa agagtgccgg 4560 aaaaggcgtt cagagcaata tgaacttttg tcggatatgc agcgaatcaa taataagacc 4620 ggaaatacga tctcaaaaga tgatatgaga ctgtttcaga aggattattt acagttaaca 4680 gaggttcaga agaatattga aagactcata aaaaaacgcc tggattatgt accccggcgg 4740 ttggatgatc ggtatctttc gcaatatctc tatcaaatga cgcataatgc aaaaaaaggc 4800 tagaaaaaag tggattttat tgatattgtc gaaatataaa aaaagaaccg cctgcggcca 4860 tgcaaagtgc ggttcccgaa attctgtgta aggttcccaa aatgctgtgc agggattagt 4920 ccctcaatat gttaaattca attttaacac gagagactaa ttcctgccac ataaggagag 4980 gaattagatg aaaaaaaata atgttgtaga ttttgaaaaa gctgaaaaga acgctagatt 5040 aagggacttt gaagttgaaa agaaaaagtt taagcaaagc tataacgatg tttctcagga 5100 acaattggaa gaggctttgc aagtagtaag cagagctact ggaaaagagc attatatagg 5160 tactaaaaaa agttctcaat cgaaagtgag gtttgctcaa caattgcaag agaatctagg 5220 atttttaaat aaaaaaaaat atctaacggg cagagagaaa atttttttac aagatataat 5280 tccttacata gcttttgaga ctaattgtat tgttcttgat ataaaagcca aaaaccccgt 5340 tccagcaagc attacagaaa ttggggaatt aattaatagt tcaaggcaaa acgtaagtgc 5400 ggtaattaat tctttaaaaa gaaaaggaat tattgcaaaa gccgaatcag gtattgaggg 5460 taataatgca aaagcatatg caattttcat taaccctcat gtagtttata cgggtgataa 5520 agacaatgta aatgaagctt tgcaagtcat gtttcgtaaa gccatgaaaa tgcccgtatt 5580 aagggattta cctgataggt tattttaata tgtcagtcgc agtcatcgat ttgataactg 5640 cgactttttt gttcacattt tgttcacatt cagtttgtat tttgttcgta tttttgttct 5700 tgttcgtatt tttgttcgtc gcatttttgc gacgcaagtg tcgcaaaaat gcgacggacg 5760 aaaatctctg aaacccttga tatataagga tttttagcac tttttaaacc tcttcccttc 5820 tcattcttta taaatagcat ttcgttctgg aatttgcaac cctgaattta gggaaattga 5880 cgtaatttcg cataaagcga aaaaagccac cataaaggtg gcaagatctt ctgttaagca 5940 aagatttatc cctgccttct gaaggccatt atttgccgca tatagcgttt ttcttgtgta 6000 ctgctataaa aaccctaaaa atcatttttc gtcgctgtat ggctgtttcc ggccgttaaa 6060 aagccattca atgcagttta agaagaattt tgcctaatct aatacaacca ttttctctgc 6120 cggatttggc gtatgttaga gcccggttaa cggactcttt ttttatgggc aatgttgtaa 6180 tgatttttca ttacaacgga atttttaaaa acctaattaa atcaagggtt taacccactt 6240 tcttaggaat gtcccttctt actcttatga taaatagcaa ttcgtcccgg aatttgcaac 6300 cctgaattta gggaaattga cgtaatttcg cataaagcga aaaaagccac cgtaaaggtg 6360 gcaagatttt ttgttcgtgt cttttttgac acggaggtgt gaccaaatgg acacacacgg 6420 aaattcctca aaatttatcc ctgtcttctg aaggccatta tttgccgcat atagcgtttt 6480 tcttgtgtac tgctataaaa aaccctaaaa atcatttttc atcgctctat ggctgtttcc 6540 ggccgttaaa atgccattta aggagaattt ttcccaatct aatacaatga atgcaggtca 6600 ttttctctgc cagtttgcat acgggcatcc tgttgctaca tgatctggaa atctaggttg 6660 ttgaaaatca acaacctgat agtcccgggc tttttaaacg atactcctca atgataatga 6720 gcaattgcaa aaagatgaga ggggttttat aataaagaaa aaagaaaata aagttttaaa 6780 gaaaatgtgt ttttttatcg aaagggggca taacttatgg tac 6823 //