ID DQ518171; SV 1; circular; genomic DNA; STD; PRO; 3303 BP. XX AC DQ518171; XX DT 29-MAY-2006 (Rel. 87, Created) DT 19-SEP-2007 (Rel. 93, Last updated, Version 3) XX DE Campylobacter coli RM2228 plasmid pCC2228-2, complete sequence. XX KW . XX OS Campylobacter coli RM2228 OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Campylobacteraceae; Campylobacter. OG Plasmid pCC2228-2 XX RN [1] RP 1-3303 RX DOI; 10.1016/j.plasmid.2006.08.005. RX PUBMED; 17064774. RA Miller W.G., Heath S., Mandrell R.E.; RT "Cryptic plasmids isolated from Campylobacter strains represent multiple, RT novel incompatibility groups"; RL Plasmid 57(2):108-117(2007). XX RN [2] RP 1-3303 RA Miller W.G., Mandrell R.E.; RT ; RL Submitted (26-APR-2006) to the INSDC. RL Produce Safety and Microbiology Research Unit, USDA, ARS, WRRC, 800 RL Buchanan St., Albany, CA 94710, USA XX DR StrainInfo; 692414; 0. XX FH Key Location/Qualifiers FH FT source 1..3303 FT /organism="Campylobacter coli RM2228" FT /plasmid="pCC2228-2" FT /strain="RM2228" FT /mol_type="genomic DNA" FT /db_xref="taxon:306254" FT misc_feature 150..173 FT /note="GC-rich region" FT misc_feature 174..209 FT /note="AT-rich region" FT repeat_region 249..270 FT /rpt_type=DIRECT FT /note="iteron I" FT repeat_region 271..292 FT /rpt_type=DIRECT FT /note="iteron II" FT repeat_region 293..314 FT /rpt_type=DIRECT FT /note="iteron III" FT repeat_region 315..336 FT /rpt_type=DIRECT FT /note="iteron IV" FT repeat_region 337..351 FT /rpt_type=DIRECT FT /note="iteron V" FT gene 355..520 FT /gene="repA" FT promoter 355..383 FT /gene="repA" FT -35_signal 355..360 FT /gene="repA" FT -10_signal 378..383 FT /gene="repA" FT stem_loop 390..417 FT /note="imperfect" FT CDS 440..520 FT /codon_start=1 FT /transl_table=11 FT /gene="repA" FT /product="RepA" FT /note="replication protein" FT /db_xref="UniProtKB/TrEMBL:Q19N26" FT /protein_id="ABF69288.1" FT /translation="MKRHSKRFVRLYLKFRFFKLKVEVFF" FT gene 578..1615 FT /gene="repB" FT CDS 578..1615 FT /codon_start=1 FT /transl_table=11 FT /gene="repB" FT /product="replication initiation protein" FT /db_xref="GOA:Q19N25" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q19N25" FT /protein_id="ABF69289.1" FT /translation="MSEIVKYHNDFNKIQLPSFTEQEQNLLFLIFARIKEKGIDNVINL FT YANDFKINEKLSNSREYLTENINSLKYKFFKANFKQIIETKTEVIHKYVNLFETMEIHY FT VKRNPDDGYDESTLFNRITLKINPDFAYLVNQLTTNFTAFELEEFIALSGKYAKTLYRL FT LKQFRTTGKAYFEWDEFCKVMDIPQDYRQSEVDKWILKPAIKELSKERNLFDQIRVPFK FT NLAYEKEKTAGRGRGGKVSGISFTFKPENIQMQKLENESQKIMSDEQKYLKILNNMKLN FT QVRFDYNDKLWQFNDFDFDEFKIIAIELVRDEYENLNFGNHMHFNAKNQEQFFKMIETF FT RKGIR" FT gene 2029..3303 FT /gene="mob" FT CDS 2029..3303 FT /codon_start=1 FT /transl_table=11 FT /gene="mob" FT /product="mobilization protein" FT /db_xref="UniProtKB/TrEMBL:Q19N24" FT /protein_id="ABF69290.1" FT /translation="MSKVATAHCNPKKQPALNHNDRTNDNAKTITKELTHLNEYSCTSD FT EVRKNIERLYKKAYENFYKYCENKNGLAKSGKPKGLQNFTKKEKCYHEFIYEIGENTTM FT EQCQELTQKIAELTGFTPLQVVIHRDEVSENAKGEKQTHYHAHAVFFTLDNNGLQLARR FT EASLNKANLSKIQTLTAQSLKMERGANRYENNEKQPQYIQDYKTYAQFKEQEKALLQRI FT QEQEHKLTQMALELKKKEKEIQDKAKELKSKENELQAKIEQHQKHIQNLELGHERALKE FT LTQEFEKRLSLWKNILTFGKYNAKVREDYQLTKNAFLISTDESRREANKELEYLKFEYH FT KVKDERDNLKTLFEAHKTKNVKLETRLKEIGKWCEKNLSVEQLKEIFPLKAERIEKELK FT YQRAFENSFEQTKTKRNDRGFGFSR" XX SQ Sequence 3303 BP; 1340 A; 462 C; 582 G; 919 T; 0 other; ttttcttttt tggtgcttta gcaaatcgca cctgttaagg tgctatgatt tgcgaaaagg 60 gggtgcgggg gctgtctgag tgcgtagcac ggaagacgga caaagcccac cgccctagaa 120 aaaaaattac tcaacttttt ttgttttttc tctcgcgcgc gtacgcgtac gcgatttttt 180 ttatttttta tatatttttc ttatttttag ggggctttct aagccctata tgatgggggc 240 tagcgaaata ttaagggtag aaatggtagg tattaagggt agaaatggta ggtattaagg 300 gtagaaatgg taggtattaa gggtagaaat ggtaggtatt aagggtagaa actattgaca 360 atctattttt aatatgctac aataaaaaat ccgccttgag ttttcactct tggcggaaat 420 ttatcaatca aggctaacta tgaaacgaca tagtaagcgt tttgtgagat tatacctaaa 480 atttaggttt tttaagctta aagttgaagt atttttctag caaaaccgca ggggcagaga 540 agccccttgc cttgattgtc ttactttgga tattcaaatg agcgaaatag ttaaatatca 600 caacgatttt aataaaattc agttgcctag ctttacagag caagaacaaa accttttgtt 660 tttaatcttt gcaagaatta aagaaaaagg catagacaat gtaattaatc tctatgctaa 720 tgattttaaa attaatgaaa aactttctaa ctcaagagaa tatttaacag aaaatatcaa 780 tagcttaaaa tataaatttt tcaaggcaaa ttttaaacaa atcatagaaa caaagacaga 840 agttatacac aaatatgtaa atttgtttga aacaatggaa atacactatg ttaaaagaaa 900 tcctgatgat ggatatgatg aaagcacttt atttaacaga ataaccctaa aaataaaccc 960 tgattttgct tatttagtca atcaactaac tactaatttt acagcttttg agcttgaaga 1020 atttatagcc cttagcggta aatatgctaa aacactttac cgccttttaa agcaatttag 1080 aaccactggc aaagcttatt ttgagtggga cgagttttgt aaagttatgg atataccaca 1140 agattataga caaagcgaag tcgataaatg gattttaaaa cctgctatca aagaactttc 1200 taaagaacgc aatctttttg accaaatcag agtgcctttt aaaaatcttg cttatgaaaa 1260 agaaaaaacc gcagggcgtg ggcgtggcgg taaagtttca ggtattagct ttacttttaa 1320 acctgaaaat atccaaatgc aaaagctaga aaatgaaagt caaaaaataa tgagcgatga 1380 gcaaaaatat ttaaagattt taaacaatat gaaacttaat caagttagat ttgattataa 1440 tgacaagctt tggcaattta acgattttga ttttgatgaa tttaaaatta ttgcaataga 1500 gcttgtaaga gatgaatacg agaatttaaa ctttggaaat catatgcact ttaatgctaa 1560 aaatcaagag cagtttttta aaatgattga aacctttaga aaaggtatta ggtaaaaatt 1620 tgctataatt atatctttaa aggatacaag ttatccgcca cttgtgccaa gtgtcgagct 1680 tgtaaggggt gcaacccctt aaccccacta ataaaaatca actaaaatca ataaatgatt 1740 ttttgatttt tattaagctt ttaaaacacc aaaaaaggaa aaatttaaaa atgcaaaaac 1800 aatatcccga agtgcatagc ttagaagaaa gccttgcaat acttaaaaaa tataaagatg 1860 atgtaaataa ggaagattat gaaggtataa aatctgttat aagtaatcat gcgatagaga 1920 gtatttacat gaatgaatta gatattatcg ctatgataaa acaaagtgct ttaaagttaa 1980 gtgctgatga aatcattgct gaatataagg aaaagggatt tgtagaatat gtcaaaagtt 2040 gccaccgctc attgcaatcc taaaaaacaa cctgcattaa accacaatga tagaaccaac 2100 gataatgcta agacaatcac taaagaactt acgcatttaa atgaatactc ttgcactagc 2160 gatgaagtgc gtaagaacat agaaaggctt tataaaaaag cttatgaaaa tttttataaa 2220 tattgtgaaa ataagaatgg tttagctaaa agtggaaagc ctaaaggact tcaaaatttt 2280 actaaaaaag aaaaatgtta tcacgagttt atatacgaaa tcggcgaaaa tactacaatg 2340 gagcaatgcc aagagcttac gcaaaaaatt gcagagctta caggatttac acctttacaa 2400 gttgtaatcc atagagatga agtaagtgag aatgctaaag gggaaaaaca aacccattat 2460 cacgcccacg cagtattttt tacactcgat aacaatggct tacaacttgc taggcgtgaa 2520 gcaagtttga ataaagccaa tcttagcaaa attcaaaccc taaccgcaca aagtttaaaa 2580 atggagcgtg gagctaatcg ctacgagaat aacgaaaagc aacctcaata catacaagat 2640 tataaaacat acgctcaatt taaagaacaa gaaaaagcat tacttcaaag aatacaagaa 2700 caagagcata aattaacgca aatggcccta gaattgaaaa aaaaagaaaa agagatacaa 2760 gacaaggcta aagagttaaa atcgaaagaa aacgaattac aagcgaaaat agagcaacat 2820 caaaaacata tacaaaattt agaactagga cacgaaagag ctttaaagga acttacacaa 2880 gagtttgaaa agcgtttaag cctatggaaa aacattttaa cctttggaaa atacaacgcc 2940 aaagtaagag aagactatca gttaacaaag aatgcttttt taattagcac agatgaaagc 3000 aggagagaag ctaacaaaga gcttgaatat ttaaaatttg aatatcataa agtcaaagat 3060 gaacgagata atttaaaaac tttgtttgag gcacacaaaa caaaaaatgt taaattagaa 3120 actcgactaa aagaaatagg caaatggtgt gaaaaaaatt taagcgtgga gcagttaaaa 3180 gaaatatttc cattaaaagc cgaaagaata gaaaaagagc ttaaatatca aagagctttt 3240 gaaaattctt ttgaacaaac aaaaactaaa agaaacgata gagggtttgg gtttagcaga 3300 tag 3303 //