ID   DQ518170; SV 1; circular; genomic DNA; STD; PRO; 1307 BP.
XX
AC   DQ518170;
XX
DT   29-MAY-2006 (Rel. 87, Created)
DT   19-SEP-2007 (Rel. 93, Last updated, Version 3)
XX
DE   Campylobacter coli RM2228 plasmid pCC2228-1, complete sequence.
XX
KW   .
XX
OS   Campylobacter coli RM2228
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
OG   Plasmid pCC2228-1
XX
RN   [1]
RP   1-1307
RX   DOI; 10.1016/j.plasmid.2006.08.005.
RX   PUBMED; 17064774.
RA   Miller W.G., Heath S., Mandrell R.E.;
RT   "Cryptic plasmids isolated from Campylobacter strains represent multiple,
RT   novel incompatibility groups";
RL   Plasmid 57(2):108-117(2007).
XX
RN   [2]
RP   1-1307
RA   Miller W.G., Mandrell R.E.;
RT   ;
RL   Submitted (26-APR-2006) to the INSDC.
RL   Produce Safety and Microbiology Research Unit, USDA, ARS, WRRC, 800
RL   Buchanan St., Albany, CA 94710, USA
XX
DR   StrainInfo; 692414; 0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1307
FT                   /organism="Campylobacter coli RM2228"
FT                   /plasmid="pCC2228-1"
FT                   /strain="RM2228"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:306254"
FT   stem_loop       405..421
FT   stem_loop       422..459
FT                   /note="imperfect"
FT   stem_loop       477..512
FT                   /note="imperfect"
FT   stem_loop       513..531
FT   stem_loop       544..561
FT   stem_loop       631..677
FT                   /note="imperfect"
FT   misc_feature    672..780
FT                   /note="AT-rich region"
FT   stem_loop       681..698
FT   repeat_region   682..699
FT                   /rpt_type=DIRECT
FT   stem_loop       704..764
FT                   /note="imperfect"
FT   repeat_region   704..721
FT                   /rpt_type=DIRECT
FT   gene            732..1307
FT                   /gene="repL"
FT   promoter        732..765
FT                   /gene="repL"
FT   -35_signal      732..737
FT                   /gene="repL"
FT   -10_signal      760..765
FT                   /gene="repL"
FT   CDS             792..1307
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="repL"
FT                   /product="replication initiation protein"
FT                   /note="similar to RepL (PF05732)"
FT                   /db_xref="GOA:Q19N27"
FT                   /db_xref="InterPro:IPR008813"
FT                   /db_xref="UniProtKB/TrEMBL:Q19N27"
FT                   /protein_id="ABF69287.1"
FT                   /translation="MTQISEVDLIDETRTKIDDNPRKISGIKTNYIGHRTFRDIETGEV
FT                   IELEYVEKKVSHTLPKGWRRVYLEHFMEVLTGLLASNRKIDVIEYILSNLDSENKFTQT
FT                   QAFVVKKLKSNPRTVNETFKYLVDMDFMKKQGTAYIVNPKYVCAFGSDKKNRTIAINYS
FT                   YDEPTLFD"
XX
SQ   Sequence 1307 BP; 468 A; 211 C; 241 G; 387 T; 0 other;
     aggctagaag cggtgtaagg gcgtcggccg cccttatgca ctccaaaaag caaagaaaag        60
     cccttaaaag gactttcttt gcaaaaaaga atattacccc taagaaatct cctaaaaacg       120
     atttaaaccc taatttcatt cttttttggt gctttagcaa atcgcaccgt aaggtgcaat       180
     gatttgcggc aaggaaaggt gcggtgtcgt gaagttagcc tagagctaac gaacggacaa       240
     gacaccgccc tattagttag ctagtcgctc cgctccctaa actaacctaa cgccaagttg       300
     tattacaggc taatatgatg atgaagtttt ggctatattc tttggagtgt tctaggcggg       360
     ctgtccgcct taatctgcta tctgcgtttg aatttgaagg ggttaagggg ttgcacccct       420
     tacaagctcg acacttggca caagtggcgg atagcttgta tccttttctc atagggcgag       480
     gttactcttt gtagctacaa agagaacact cgttagggga ttttccccta agacccctta       540
     gtcgctgttt taaaaaacag ctctaatata ctagaacaaa gagaaaaaaa aaacagctct       600
     aatatactag aacaaagaga aaaaaaaatg aaaaatctta ataaataact atggcatagg       660
     agtttgaaag catttttaaa attatacttt tgtataataa atcttatact tttgtataat       720
     agaaatttat ttttaagtaa atttttatta tactagaagt ataatttttt aaaaatttta       780
     ggagtaaatt tatgacacaa attagcgaag ttgatttaat tgatgaaact agaactaaga       840
     ttgatgataa tcctagaaaa atttcaggta taaaaacaaa ttatataggg catagaacct       900
     ttagagacat agaaacagga gaggttatag agcttgaata tgtggaaaaa aaggtatctc       960
     acacccttcc aaaagggtgg agaagggttt atttagaaca ttttatggaa gttttaacag      1020
     gtttattagc ttcaaatcgt aaaatcgacg tcattgaata tatactctca aacttagata      1080
     gtgaaaacaa atttacacaa acacaagctt ttgtggttaa aaaattaaaa tctaatccaa      1140
     gaacagtgaa tgaaactttt aaatatttag tggatatgga ttttatgaaa aaacaaggaa      1200
     ctgcatacat tgtaaatcct aaatatgtct gtgctttcgg ctctgataaa aagaaccgca      1260
     ccattgcgat taattacagc tacgatgaac ctactctttt tgactaa                    1307
//