ID DQ499634; SV 2; circular; genomic DNA; STD; PRO; 5161 BP. XX AC DQ499634; XX DT 05-JUN-2006 (Rel. 88, Created) DT 11-SEP-2007 (Rel. 93, Last updated, Version 4) XX DE Acidiphilium multivorum strain JCM8867 plasmid pAM5, complete sequence. XX KW . XX OS Acidiphilium multivorum OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; OC Acetobacteraceae; Acidiphilium. OG Plasmid pAM5 XX RN [1] RP 1-5161 RX DOI; 10.1016/j.plasmid.2007.01.005. RX PUBMED; 17363056. RA Singh S.K., Banerjee P.C.; RT "Nucleotide sequence analysis of cryptic plasmid pAM5 from Acidiphilium RT multivorum"; RL Plasmid 58(2):101-114(2007). XX RN [2] RP 1-5161 RA Singh S.K., Banerjee P.C.; RT ; RL Submitted (19-APR-2006) to the INSDC. RL Molecular Genetics, Indian Institute of Chemical Biology, 4-Raja SC Mullick RL Road, Jadavpur, Kolkata, W.B 700032, India XX RN [3] RC Sequence update by submitter RP 1-5161 RA Singh S.K., Banerjee P.C.; RT ; RL Submitted (15-DEC-2006) to the INSDC. RL Molecular Genetics, Indian Institute of Chemical Biology, 4-Raja SC Mullick RL Road, Jadavpur, Kolkata, W.B 700032, India XX DR StrainInfo; 162548; 1. XX CC On Dec 15, 2006 this sequence version replaced gi:103485463. XX FH Key Location/Qualifiers FH FT source 1..5161 FT /organism="Acidiphilium multivorum" FT /plasmid="pAM5" FT /strain="JCM8867" FT /mol_type="genomic DNA" FT /db_xref="taxon:62140" FT CDS complement(71..1162) FT /codon_start=1 FT /transl_table=11 FT /product="RepB/MobA" FT /note="mobilization protein; conserved MobA_MobL protein FT family" FT /db_xref="GOA:Q19QS6" FT /db_xref="InterPro:IPR005053" FT /db_xref="UniProtKB/TrEMBL:Q19QS6" FT /protein_id="ABF71733.2" FT /translation="MAIYHASVKVVGRGGGRSSVAASAYRSGECLTNERDGNTHDYTKK FT QGVVHREIMTPENAPAWMSDRSKLWNGVEAAEKRKDAQLFRDVEIALPRELSREELINL FT VRDFVKERCVTMGWWPTSLSRAPRQRRGEATSCPHHADHAPHRGRELGNKAREWNPDFA FT TKDGKGFVKDKSPLLGLREGWAEHINRALERAHIAERVDHRSLTVQREVALEMSQDQTR FT PEPERLLAERCAQDLDREPQPKLGAAAAMERRGVQTDRGDQMRAVQGRNRERQGVWQQV FT REWGAQALDKARDWAVELRERLAGVDLSGLRTANLSAALAGADLFCVAAGQPSCRRPTK FT EAVISRQPSRTPSKGRDGPEMDL" FT CDS 1937..2173 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q19QS5" FT /protein_id="ABF71734.1" FT /translation="MVLAVAVLLVGGGSFLSLAWQRHESASLRTEETALRAQIQTDRAN FT LAALKAKGGNSHLFFCGGGRARKEEPSLRPGCP" FT CDS 2836..3810 FT /codon_start=1 FT /transl_table=11 FT /product="Rep" FT /note="replication initiation protein; protein involved in FT initiation of replication" FT /db_xref="GOA:Q19QS4" FT /db_xref="InterPro:IPR007889" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q19QS4" FT /protein_id="ABF71732.1" FT /translation="MKQKQLGLTTEPGGTWVQVERAAMERWSKLAVSNSRAAAVMMLIT FT SQMGRHNALVVSQATLAKMAGCGLNTLKRALGVLRDGNWIEVRQIGPTGTACAYIVNDR FT VAWSGNRDGIRYSLFSAAVLVSDAEQPDHSELGAQPSLERIPTMHPGERQLPTGPGLDP FT PTQPPLMGLEPDLPARVKEPYGPRDGATWAMLSQRRAAQAWGISRATLQRAVSSGKLSA FT LPDGTIDPAEMLRVFGEAKGGPSGHHNEPLGPPLGRGDEMAFQAEIRMLKAQIEAKEAL FT LSAKDRHIEDLSQALRLLAGPPAPAPQPSLLAKLFSRQRSPRS" FT CDS 3946..4257 FT /codon_start=1 FT /transl_table=11 FT /product="DUF-29 protein" FT /db_xref="InterPro:IPR002636" FT /db_xref="UniProtKB/TrEMBL:Q19QS3" FT /protein_id="ABF71735.1" FT /translation="MGKSEKRELVSRLTILLLHLLKWQFQAPKRSKSWQNSVEVQRISL FT DSHLRDNPSLKSVLDSAISEAYRVARLEAENETGIDKNIFPVTCPWSFEKMMAEDFWP" FT CDS 4645..5160 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /note="similar to Solibacter usitatus integrase catalytic FT region" FT /db_xref="UniProtKB/TrEMBL:Q19QS2" FT /protein_id="ABF71736.1" FT /translation="MPPQEAALLNTLSKYNEAYDQAPNEIQQDRVSTEFARRFCAEIPQ FT GTVHDWIGTLETILPTHHPSGVQITIELPSRDLYSGSLGIGLSVGNFYGYGVTRDGMIP FT SGPLLIRANTPLYHTVSKIPDNDYDRVSFSGRFVPFISPTACEKAIHYATYFDAIRFYK FT VRDLGPDK" XX SQ Sequence 5161 BP; 1145 A; 1573 C; 1397 G; 1046 T; 0 other; ggcgccaaca gtcctctgcc tgtacaccat ggctaaataa atttgtcgtt ccccttactc 60 ggcctctggc ctaaaggtcc atctctggcc cgtctcggcc cttgctaggt gtacggctag 120 gctgccggga gataacagcc tcctttgtag gacgcctgca gcttggttgg cctgccgcaa 180 cacagaacag atctgcacca gccagggccg cgctgaggtt ggcggttctc aacccagaca 240 gatcaacgcc ggccagcctc tcccgaagct caacagccca atcacgggcc ttgtcgagcg 300 cctgagcccc ccactcgcgc acctgctgcc aaaccccctg ccgctcccta ttcctgccct 360 gcacggctcg catctggtcg ccgcggtcgg tctggacgcc ccgtcgctcc atcgcggccg 420 ccgcccccag cttcggttgc ggctcgcggt ccaggtcctg cgcgcacctc tccgctagca 480 agcgttccgg ttcaggccga gtctggtcct gcgacatctc aagtgccact tcacgctgga 540 cggtcaggct ccgatggtcc acccgctccg cgatgtgggc gcgctccaac gcccggttga 600 tgtgctcagc ccaaccctct cgcagaccca acagcgggct tttgtccttc acgaacccct 660 tcccgtcttt ggtggcaaag tccgggttcc actcccgcgc cttgttgcca agctctcgcc 720 ctcgatgtgg cgcatggtca gcatgatgtg ggcatgaagt tgcttctccc cgtcgctggc 780 gcggggctcg tgaaagcgat gtcggccacc atcccatggt cacgcatcgc tctttcacga 840 agtcccgtac aaggttgatc agctcttccc gcgaaagctc acggggaaga gcaatctcaa 900 catcgcggaa tagctgcgca tccttccgct tttccgccgc ctcgacgccg ttccataatt 960 ttgagcgatc agacatccag gcaggcgcat tctcgggagt cataatctcc cgatgaacaa 1020 cgccttgctt tttggtgtaa tcatgcgtgt tgccgtcgcg ctcgttcgtc aggcattcgc 1080 ctgaacggta cgccgatgct gcaaccgatg aacggccacc accacgcccg acgactttca 1140 cactggcatg atagatcgcc atagacaacc tcacacctac tgaaggggtg cagggggaac 1200 ccctgccgtg cacattgcaa agcaatgtat aagcgcgcac ttcgtgcatt gtccagttca 1260 tattcatccg ataaagtgac atcatctctg attgaggaac cgtgagatgg caaagactat 1320 cgaccagcag attgccgatg cagaggcccg tcttgcacgg ttacgtgaaa aatctcggaa 1380 gaaggaaact cgtcacaaga tcattgtggg tgcgctcgtt ttgaccgaag cagcgaagga 1440 tgcaaaaatt gccgggtggc tgctaaagca gattgacacc aaggtcacgc gcgacgtgga 1500 caaaaccgat atcgctccgg tcgtcgatga tctgaggaag gtggcagcaa gccagaatca 1560 tcaagcggcc tcggtagagg ccgcgcatga gtgaccccgt tgtagaactg gtcgaaaccc 1620 tcaaggcggt tcgcctcgaa gttgctgcta tcggtcagaa gatcgacacc aaagctgcca 1680 ctcccgccca actggcagag ctctctcggg ccgttaaatc ggcagatccc gccgaactcg 1740 cctcttgcat cgcaaccgcc gctgtgcagg caggacagaa aatcgccaga gaggttcggg 1800 gcgaaaccga gaaattgagc actgccacgg ccagtctcac tacccatgac accaatctgg 1860 acacagccat caaaagcatt gccgcaaccg gggaggctat caggaaagcg agtttctggc 1920 ttattttcgc gccattatgg tcctggctgt ggctgtgctc ctggtcggtg gcggaagctt 1980 cctctccctg gcatggcaac ggcacgaaag cgccagcctt cgcaccgagg aaaccgccct 2040 gcgcgcccaa atccaaaccg acagggccaa tctcgcggct ctaaaagcca agggaggtaa 2100 cagtcatctt ttcttctgcg gcggggggcg ggcacgaaaa gaggaaccgt ctctgcgtcc 2160 aggttgcccc tgatcagctt ggcccaaaca tggctcatgc ggtcacatgg cacgatgtcc 2220 acaaagcgcg cggcccccag tatgtcatcg ttgccggata ttagggctgc aatcagacgg 2280 ccctagagcc gcccctggcg gctggatagg gcacaacctc gccccaacgc ccctcaatgc 2340 cactttgtgg gcctcagagc cgccctaggc ggctggatag gatacgatcc ggttcgccag 2400 tgcggcccgt tagggccgcc gatcatgggg caagccgctg acgccggctt gccggccatc 2460 attcatcggc cctgagggcc gctgatcagc ccgtccgcac aggtgggtcc accgggatgg 2520 ctacgcgtcg ccagcctcct tacggggcgc tccgaaacgc atccccgtgg actacctgca 2580 cggcaggcag cccccttcgg gggtgctcct taagatcata gaaggagcga gaaaaaaagt 2640 attatatatc aataatatag aagggggggg tagcccacca gctatgggct acccctagcc 2700 caccagctat gggctaggtt tggacgaaat ttgtccattt aatgttgaat ttcatccaca 2760 cttacgctat tcagcatgga taaaatccgt ccattttcgg atgaataatg cccaattttg 2820 ggctaggggt agcccatgaa gcaaaagcaa ctcggattga ccaccgagcc cggcggaact 2880 tgggtgcaag tcgaacgcgc cgcgatggag cgttggtcca agctcgccgt ttcaaactct 2940 cgggcagccg ccgtgatgat gctcatcacc tcccagatgg ggaggcacaa cgctctggtg 3000 gtttctcaag ccacattggc gaagatggca ggctgtggat tgaacaccct gaagagagct 3060 ttaggggttt tgagggatgg caactggatc gaagttcgcc agatcggccc gacaggcacc 3120 gcctgcgcct acatcgtcaa cgatcgcgta gcttggtccg gtaaccgcga tggcatccgc 3180 tatagcctgt tctcggcggc agtgctggtc tcggatgccg aacaaccaga ccattctgag 3240 cttggcgcac aaccatccct agagcgtatc ccgaccatgc atcccggcga gcgccagcta 3300 cccactggtc ccggtctcga cccgcccacc cagccgccac tgatgggatt ggagcctgac 3360 ctaccagccc gcgtgaagga gccatatggg ccacgtgatg gagccacttg ggccatgctg 3420 agccagaggc gagccgccca agcctggggg atatctagag ccaccctaca gcgggccgta 3480 tctagcggaa aacttagtgc tttgccggat ggaacgattg atccggcaga gatgcttcgt 3540 gtctttggcg aagccaaggg tggcccatcg ggccaccaca atgagccact tgggccaccc 3600 ctgggccggg gggatgagat ggcttttcag gccgaaatcc ggatgctcaa agcgcagatc 3660 gaggccaagg aggctctgct ctccgccaag gatcggcaca tcgaggattt gagccaggcg 3720 ctccggctgc tcgctggccc gccagcaccg gcaccacagc cgtctctgct ggccaagcta 3780 ttttcccgcc agaggtcgcc ccgttcgtga taggatcaac accatgagca catcgaccct 3840 ctatgaccgc gatttctacg cctgggcgaa tgacaggccg gacttctgcg cgctgggaag 3900 ctgacgcagg ccgacattga acacatcgcc gaggagatcg agagcatggg caaatccgag 3960 aagcgcgaat tagtcagccg actgactatc ttgcttctcc atctgctcaa gtggcaattc 4020 caagctccaa agcgcagcaa aagctggcaa aacagcgtcg aagtccagcg aatcagccta 4080 gattcgcatt tacgcgacaa tcccagcctc aaatccgtct tggatagcgc aatttctgaa 4140 gcctaccgcg tggcgcgcct ggaggctgaa aacgaaaccg gcatcgacaa gaatattttt 4200 ccggtgacct gcccatggtc ctttgaaaaa atgatggcag aagacttctg gccatagttt 4260 gggagccacc acaatgacac aaaatctgaa taatgaatta cgcctcaaaa ttctcgaaaa 4320 gctatattct atagaatcta cgcttaaccc tggagatagc gttctggtgc agccgtatat 4380 cgacggacag gaaaccacta atctccgttg aaaatacatg gctatgattg gaaccaaatt 4440 gattccacgc ttcgtgaaat gtgtagaacg ggcctcttaa gctcgggctc agtccagtat 4500 gacgcgcccg ccattggtat atactttagc gcattaacac cacgcggccg taccctgctt 4560 ggaaaataga accctagatt tatatcggct gtcaaagtag tggttgtcgc cttatgtttg 4620 gtgagccttc cggctttcgc agcgatgccg ccacaagagg ccgcgctgct caataccctt 4680 tcaaaatata acgaagcgta tgatcaggca ccaaatgaga tccaacaaga tagggtctca 4740 actgaattcg ctcgcaggtt ttgcgccgaa attccgcagg ggacggtaca tgactggatc 4800 ggcacactgg aaacgatcct gccaacccat catccgtccg gcgttcagat cacaatcgaa 4860 ctgcctagcc gcgatctcta ctcgggatcg cttggaatcg ggctgtctgt cggcaatttc 4920 tacggatacg gcgtcacgcg agatggcatg attccctcgg gaccgctgct gattcgtgcc 4980 aacacgccgc tctatcatac tgtctcaaaa atccccgata atgactatga ccgggtgagc 5040 tttagcggaa gatttgtgcc gttcatcagc cccaccgctt gcgaaaaggc gatccattac 5100 gccacttact ttgatgcgat tcgcttctat aaggtcagag acctcgggcc ggataagtag 5160 a 5161 //