ID DQ458911; SV 1; circular; genomic DNA; STD; PRO; 3680 BP. XX AC DQ458911; XX DT 01-NOV-2006 (Rel. 89, Created) DT 01-NOV-2006 (Rel. 89, Last updated, Version 1) XX DE Bifidobacterium longum plasmid p6043B, complete sequence. XX KW . XX OS Bifidobacterium longum OC Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; OC Bifidobacteriaceae; Bifidobacterium. OG Plasmid p6043B XX RN [1] RP 1-3680 RA Sangrador-Vegas A., Stanton C., Ross R.P.; RT "Relatedness among Bifidobacterium longum plasmids"; RL Unpublished. XX RN [2] RP 1-3680 RA Sangrador-Vegas A., Stanton C., Ross R.P.; RT ; RL Submitted (23-MAR-2006) to the INSDC. RL Moorepark Food Research Centre, Teagasc, Moorepark, Fermoy, Co. Cork, RL Ireland XX FH Key Location/Qualifiers FH FT source 1..3680 FT /organism="Bifidobacterium longum" FT /plasmid="p6043B" FT /strain="DPC6043" FT /mol_type="genomic DNA" FT /db_xref="taxon:216816" FT CDS 398..2092 FT /codon_start=1 FT /transl_table=11 FT /product="Mob" FT /note="mobilization protein" FT /db_xref="GOA:A0ES92" FT /db_xref="InterPro:IPR005053" FT /db_xref="UniProtKB/TrEMBL:A0ES92" FT /protein_id="ABE99606.1" FT /translation="MAIYHLSVSNVSRASGSKATATLSYISGRRVHDERRGETYDYGRK FT ERVLRVGTLLPEGAPAEYADPAVLFNAVELHETGRTARPAKKIVVALPREFTPRQRVQA FT LEEYIRENLNADGYAATYAIHDDGRGNNPHAHILVANRQIDPATGGWARLKQRMEYVLD FT ERGERVPLIDPETGRQKTDKRGRRQWKRTSVSLNPLDRKAKLKALRESWANTCNARLDE FT TARIDHRSLEDQGSDLEPTIHEGYAARAIERAGGVSERCQTNREIRRSNSLLTAVRAEL FT GRIFDRLGELFAAKIGRLRRRQARPEPAAPNWRYFEGDARRQLEADKADHTAAIRGKLM FT DARADVGNREEWWRSHGTEEHEAAKQIIDVARAASREARDANIFKRGRLLRNAEQVAGE FT QSERLRGAVPWLEDADIPADWDQANRFRMRTTKAIYDHDMQPRTRLVAELERRLEQAER FT AESERPSPEQVKALALRMAEQRAQAENPTQDTKRPAPSGDEPLDLSEPEDWGEASPFES FT RQAPRTKADLLNEIRQRTDRLTGQREAEQRQIDPWSAQPPQRRGHGR" FT CDS complement(2089..2982) FT /codon_start=1 FT /transl_table=11 FT /product="Rep" FT /note="replication protein" FT /db_xref="GOA:Q83YJ5" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q83YJ5" FT /protein_id="ABE99607.1" FT /translation="MSNEIVKFSNQFNNVALKKFDAVHLDVLMAIASRVREKGTATVEF FT SFEELRGLMRLRKNLTNRQLADKIVQTNARLLALNYMFEDSGKIIQFALFTKFVTDPQE FT ATLAVGVNEEFAFLLNDLTSQFTRFELAEFADLKSKYAKEFYRRAKQYRSSGIWKISRD FT EFCRLLSVPKSTAEQVRDLNKRVLKPIIEECGPLLGLKIERQYVKRRLSGFVFTFARET FT PPVIDARPVEARKAEDAGHWTSVAGYGEVFTTTELFDVTAARDHFDGTVEAGECRFCAF FT DARNREHHAQNAGKLF" XX SQ Sequence 3680 BP; 680 A; 1227 C; 1169 G; 604 T; 0 other; gggccctgcg ttcgcgttcc ctgcgccgcg ccatgaggtc gttctcgcgg gccttgagct 60 gggcctgcct ctcctgcagg gacttgatct gctcatccag gctcttcacc atcgaaacgg 120 ctccttacat ggtctgcatc atccgtatgg tgatatgatt ctaccagcaa ggaaatccct 180 aatcaaagat tagggcgcac ttacatgcaa ccggaggttg cattttccgt aagcgcgccc 240 tccgggggcc acgggcgttg ccctttggat tcccaccctt ccgggggagc ctcccggcag 300 gcccgggggt gctcgccgca cccctgggaa ccccttgccg cagggccgag gccccgcacc 360 ccgccgcccg cgccgatcac gaaaggagcc gaagccgatg gcgatctacc atctgtccgt 420 ctccaacgtg agccgcgcga gcggttccaa ggccacggcc acgctctcgt acatcagcgg 480 caggcgggtg catgacgagc gtcgcggcga gacctacgac tacgggcgca aggagcgcgt 540 gctgcgcgtc ggcaccctgc tgccggaggg cgcgccggcc gagtacgccg accccgccgt 600 gctgttcaac gcggtcgagc tgcacgagac cggccggacg gcgaggccgg ccaagaagat 660 cgtcgtggcc ctgccgcgcg agttcacccc caggcagcgc gtgcaggcgc tggaggagta 720 catccgcgag aacctgaacg cggacggcta cgcggccacc tacgccatcc acgacgacgg 780 gcggggcaac aacccgcacg cgcacatcct cgtcgccaac cggcagatcg acccggccac 840 gggcggctgg gcccggctca agcagcgcat ggagtacgtg ctggacgagc ggggcgagcg 900 ggttccgctg atcgaccccg agaccggcag gcagaagacc gacaagcggg gccgcaggca 960 gtggaagcgc acgagcgtgt ccctgaaccc gctcgaccgg aaggccaagc tcaaggccct 1020 gcgcgagtcc tgggcgaaca cctgcaacgc gcggctggac gagaccgcga gaatcgacca 1080 caggagcctc gaagaccagg gcagcgacct cgaacccacc atccacgagg gatacgccgc 1140 cagggccatc gaacgggccg gaggcgtcag cgagaggtgc cagaccaacc gtgagatcag 1200 gcgcagcaac agcctgctga ccgccgtccg cgccgaactc ggacggatat tcgaccgcct 1260 gggcgagctg ttcgccgcca agatcgggcg gctgcgccga cgccaggcgc ggccggaacc 1320 ggccgcgccg aactggcgct acttcgaggg cgacgcgcgc cgccagctcg aagccgacaa 1380 ggccgaccac acggccgcga tccgcggaaa actcatggac gcgagggccg acgtggggaa 1440 ccgggaggag tggtggagga gccacggcac cgaggagcac gaggccgcca agcagatcat 1500 cgacgtggcg cgggcggcct cgcgcgaggc cagggacgcg aacatcttca agcgcggcag 1560 gctgctgcgg aacgccgagc aggtggccgg agagcagtcc gagaggctgc gcggggcggt 1620 gccgtggctc gaagacgccg acatcccggc cgactgggac caggccaaca ggttccgcat 1680 gaggaccacc aaggccatct acgaccacga catgcagccg aggaccaggc tcgtggccga 1740 actggagagg cggctcgaac aggccgaacg ggccgagagc gaacggccaa gccccgaaca 1800 ggtgaaggcc ctcgcactgc gtatggccga acaacgcgcg caggcggaga acccgacgca 1860 ggacacgaaa cgtcccgcac cgtccggcga cgagccgctg gacctcagcg agcccgagga 1920 ctggggagag gccagcccgt tcgaatcacg ccaggccccc aggaccaagg ccgacctgct 1980 caacgagatc agacagcgca cggacaggct cacaggccag cgggaggccg aacagcggca 2040 gatcgaccca tggagcgcgc aaccgcccca gaggcgcgga cacggccgct agaacagctt 2100 tccggcgttc tgcgcatgat gttcgcggtt gcgagcgtca aacgcgcaga aacggcattc 2160 cccggcctcc acggtgccgt cgaagtggtc acgcgcggcc gtcacgtcga acagctcagt 2220 ggtcgtgaac acctcgccgt acccggcgac gctcgtccaa tggcccgcat cctccgcctt 2280 cctcgcctcc acgggcctgg cgtcgatcac cggaggggtc tcgcgggcga acgtgaacac 2340 gaaccccgac agcctgcgtt tcacgtactg gcgctcgatc ttcagtccaa ggagtggccc 2400 acactcctcg ataatcggct tgaggactcg tttgttgaga tctctcactt gctcggctgt 2460 ggatttggga acgctgagca gtcggcagaa ctcgtcgcgg ctgatcttcc agattccgga 2520 gctgcggtat tgtttggccc tgcggtagaa ctccttggcg tacttgcttt tgaggtcggc 2580 gaactcggcc agctcgaagc gcgtgaactg gctggtcagg tcgttgagca ggaacgcgaa 2640 ctcctcgttg accccaaccg cgagggtcgc ctcctgcggg tcggtaacga acttcgtgaa 2700 cagcgcgaac tggatgatct tgcccgaatc ctcgaacatg tagttcaacg ccagcagccg 2760 cgcgttcgtc tgcacgatct tgtcggccag ctgcctgttg gtcaggttct tcctcagccg 2820 catgaggccg cgcagctcct cgaacgagaa ctccaccgtg gccgtgccct tctccctcac 2880 ccttgaggcg atcgccatga gcacgtccag gtgcacggcg tcgaacttct tcagtgccac 2940 gttgttgaac tggttgctga acttcacgat ctcattggac atggccttag catagctcct 3000 atgggggact caaattaagt tagtccacaa ataatttgag tccccacctt gattaaaaag 3060 gagacacatt ttagcaacgt ccccggttcg ctcccttttt gtccccggtt cgctcccttt 3120 ttgtccccgg ttcgctccct ttttgtcccc ggttcgctcc ctttttgtcc ccagtaacat 3180 cctctgagcc caatgtttcc aagggctgcg gagggcctaa aagaatgtaa aaagatttta 3240 aaagatttaa aaagggcgca cggcgccttt ttttggacgt cagatcaggc catcggaggg 3300 tgtttgggga gtcctgcgtt cggggttgac cggctcgtat gagggtggct ggtatccgct 3360 tggcccgtcg tccgcccaga ggtcgctgat ctcgccgtcc cttctgcccc attcctcgct 3420 cagcgcctcg tacaccaggt cgtgcaggtt ccagttcatg ccatcgctgg ttctgacgtt 3480 gtgttccagg gccttggtga cggtggtctt gaggtcctcg cggctcgtgt agttgtccat 3540 cacgtcggtg gagcacatgg cttccaccag cgagccgagc tgcacgaggc gggctatgcg 3600 ctccttggcc ctctcgtcgc cgccctcgaa gcccgcggcc gactcggcca tcgcgccgac 3660 ctcgatcagg cgcttggtgc 3680 //