ID DQ335247; SV 1; linear; genomic DNA; STD; VRL; 5515 BP. XX AC DQ335247; XX DT 23-JAN-2006 (Rel. 86, Created) DT 29-OCT-2007 (Rel. 93, Last updated, Version 2) XX DE Bovine parvovirus-1 strain Abinanti, complete genome. XX KW . XX OS Bovine parvovirus-1 OC Viruses; ssDNA viruses; Parvoviridae; Parvovirinae; Bocavirus. XX RN [1] RP 1-5515 RX DOI; 10.1128/JVI.00815-07. RX PUBMED; 17715221. RA Qiu J., Cheng F., Johnson F.B., Pintel D.; RT "The transcription profile of the bocavirus bovine parvovirus is unlike RT those of previously characterized parvoviruses"; RL J. Virol. 81(21):12080-12085(2007). XX RN [2] RP 1-5515 RA Qiu J., Pintel D., Johnson F.B.; RT ; RL Submitted (16-DEC-2005) to the INSDC. RL Dept. of Molecular Microbiology and Immunology, University of RL Missouri-Columbia, 1201 Rollins Street, Columbia, MO 65211, USA XX FH Key Location/Qualifiers FH FT source 1..5515 FT /organism="Bovine parvovirus-1" FT /strain="Abinanti" FT /mol_type="genomic DNA" FT /db_xref="taxon:365609" FT CDS 336..2918 FT /codon_start=1 FT /product="NS-1" FT /note="nonstructural protein 1" FT /db_xref="GOA:Q2LD59" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="UniProtKB/TrEMBL:Q2LD59" FT /protein_id="ABC69727.1" FT /translation="MATGGLAKWVGAVQAFGHPSWSYVIKLRHGHVTMIERGFYELCGG FT ENWNMLHELPGDNGLLEMWESRESMLESWSPGDGHSWAMAWAGWRAARETMQRRQYVNE FT PTFSCWSQSELGENGWHVHIIIGGPGLTRQNAAISRSILCTSFFKHLLITIRQRTHAPY FT TVLSRDELNAWNWLQKIAQRVMRGDMDDIVDILKCRKANGTLVAQAINGTEFITRYMLP FT KNRKVANTVLTRHTTPEQSYDSTWGKTYGFAVCNGETVSEFTRKDLWKVLYNIYTAHPA FT ENMLNSNPSVWGDLPRVSANRIDADDAEARSRPIKLSRKQKIMAEVIQRATDGLLLTYN FT DLVVHLSDLMLMLEGMPGGSKTAEQLLTMIHIKLCAKYNAYEFMLMKTPATQNMNPGAP FT HYDCQGNLVFKLLNLQGYNPWQVGHWLVMMLSKKTGKRNSTLFYGPASTGKTNLAKAIC FT HAVGLYGCVNHNNKQFPFNDAPNKMILWWEECIMTTDYVEAAKCVLGGTHVRVDVKHKD FT SRELPQIPVLLSSNHDVYTVVGGNATFGVHAAPLKERITQMNFMKQLPNTFGEITPGMI FT SNWLSHCAHIHQEHLSLEGFAIKWDVQSVGNSFPLQTLCPGHSQNWTFSENGVCWHCGG FT FIQPTPESDTDSDGDPDPDGAVAGDSDTSANSESTVSFSSNDSGLGSVTSSAPSVPDRA FT EEIEEIPSECLEWMREEVDRLSAHDINSLAHQATGFILDPIPEEPEERERDLAREDAEP FT EASTSHTPATKRARVEEGEPWDGTQPITEGDWIDFESRQKRRRLEREEKGGEDEDMEVQ FT ESDPSAWGEKLGIVEKPGEEPIVLYCFETLPESDEEGDSDKENKTHTV" FT CDS 1185..2918 FT /codon_start=1 FT /product="NS-2" FT /note="nonstructural protein 2" FT /db_xref="GOA:Q2LD58" FT /db_xref="InterPro:IPR001257" FT /db_xref="InterPro:IPR014015" FT /db_xref="UniProtKB/TrEMBL:Q2LD58" FT /protein_id="ABC69730.1" FT /translation="MLNSNPSVWGDLPRVSANRIDADDAEARSRPIKLSRKQKIMAEVI FT QRATDGLLLTYNDLVVHLSDLMLMLEGMPGGSKTAEQLLTMIHIKLCAKYNAYEFMLMK FT TPATQNMNPGAPHYDCQGNLVFKLLNLQGYNPWQVGHWLVMMLSKKTGKRNSTLFYGPA FT STGKTNLAKAICHAVGLYGCVNHNNKQFPFNDAPNKMILWWEECIMTTDYVEAAKCVLG FT GTHVRVDVKHKDSRELPQIPVLLSSNHDVYTVVGGNATFGVHAAPLKERITQMNFMKQL FT PNTFGEITPGMISNWLSHCAHIHQEHLSLEGFAIKWDVQSVGNSFPLQTLCPGHSQNWT FT FSENGVCWHCGGFIQPTPESDTDSDGDPDPDGAVAGDSDTSANSESTVSFSSNDSGLGS FT VTSSAPSVPDRAEEIEEIPSECLEWMREEVDRLSAHDINSLAHQATGFILDPIPEEPEE FT RERDLAREDAEPEASTSHTPATKRARVEEGEPWDGTQPITEGDWIDFESRQKRRRLERE FT EKGGEDEDMEVQESDPSAWGEKLGIVEKPGEEPIVLYCFETLPESDEEGDSDKENKTHT FT V" FT CDS 2659..3300 FT /codon_start=1 FT /product="NP" FT /note="nonstructural protein" FT /db_xref="InterPro:IPR021075" FT /db_xref="UniProtKB/TrEMBL:Q2LD57" FT /protein_id="ABC69728.1" FT /translation="MERSRSPRETGSTSSRDKSDADWSERRREERTRTWKSRSPIRAHG FT ERSWGSWRSREKNQSSSTASRPYQKATRKETATKKTKHTPFNVFSAHRALSKTDLQFCG FT FYWHSTRLASKGTNEIFNGLKQSFQSKAIDGKLDWEGVGELLFEQKKCLDTWYRNMMYH FT FALGGDCEKCNYWDDVYKKHLANVDTYSVAEEITDSEMLEAAEAVDAANQ" FT CDS 3284..5305 FT /codon_start=1 FT /product="VP1" FT /note="capsid protein" FT /db_xref="GOA:Q2LD56" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR013607" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q2LD56" FT /protein_id="ABC69729.1" FT /translation="MPPTNKANSKKGLTLPGYNYLGPFNSLFAGAPVNKADAAARKHDF FT GYSDLLKEGKNPYLYFNTHDQNLIDELKDDTSFGGKLARGVFQIKKALAPALPGTSKGG FT DKALKRKLYFARSNKGAKKANREPAPSTSNQQNMEVSNDIPNDEAGNQPIELATRSVGG FT SGSVGGGGRGGSGVGYSTGGWTGGTIFSENIVVTKNTRQFICDIKNGHLYKSEVLNTGD FT TAHRQYAITTPWSYFNFNQYSSHFSPNDWQHLVNDYERFRPKAMIVRVYNLQIKQIMTD FT GAMGTVYNNDLTAGMHIFCDGDHRYPYVQHPWDDQCMPELPNSIWELPQYAYIPAPISV FT VDNNTTNTVEEHLLKGVPLYMLENSDHEVLRTGESTEFTFNFGDCEWIENNITFSMPQM FT MYNPLVRSRRIYSYSGPNNQTSNAFQNAALRTSNWMSGPGIARGTHNATLQTQSAGALV FT TMVTNGADVSGVGAVRVGYSTDPIYGGQQPDSDLLRLRYSASAAEGQQNPILENAARHT FT FTREARTKLITGSNGADGNYKEWWMLPNQMWDSAPISRYNPIWVKVPRVNRKTLLDTQD FT GSIPMSHPPGTIFIKLARIPVPGNGDSFLNIYVTGQVSCEVVWEVEKRGTKNWRPEYMH FT SATNMSVDAYTINNAGVYAGAVQNADVMQTRFNHHKVL" FT CDS 3695..5305 FT /codon_start=1 FT /product="VP2" FT /note="capsid protein" FT /db_xref="GOA:Q2LD55" FT /db_xref="InterPro:IPR001403" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q2LD55" FT /protein_id="ABC69731.1" FT /translation="MEVSNDIPNDEAGNQPIELATRSVGGSGSVGGGGRGGSGVGYSTG FT GWTGGTIFSENIVVTKNTRQFICDIKNGHLYKSEVLNTGDTAHRQYAITTPWSYFNFNQ FT YSSHFSPNDWQHLVNDYERFRPKAMIVRVYNLQIKQIMTDGAMGTVYNNDLTAGMHIFC FT DGDHRYPYVQHPWDDQCMPELPNSIWELPQYAYIPAPISVVDNNTTNTVEEHLLKGVPL FT YMLENSDHEVLRTGESTEFTFNFGDCEWIENNITFSMPQMMYNPLVRSRRIYSYSGPNN FT QTSNAFQNAALRTSNWMSGPGIARGTHNATLQTQSAGALVTMVTNGADVSGVGAVRVGY FT STDPIYGGQQPDSDLLRLRYSASAAEGQQNPILENAARHTFTREARTKLITGSNGADGN FT YKEWWMLPNQMWDSAPISRYNPIWVKVPRVNRKTLLDTQDGSIPMSHPPGTIFIKLARI FT PVPGNGDSFLNIYVTGQVSCEVVWEVEKRGTKNWRPEYMHSATNMSVDAYTINNAGVYA FT GAVQNADVMQTRFNHHKVL" XX SQ Sequence 5515 BP; 1722 A; 1275 C; 1402 G; 1116 T; 0 other; atatttttat tactcatctc ctgcatccac catattggct gcccgggcca ataatgcgag 60 cggctgcgcc gctgcgcgct tcgcgcgcgc attgtaaggc ctaatcgggc agccaatatg 120 gtggatgcag gagatgagta ataaaaatat agagcctgtg attaagcgag acgtcataga 180 cgaggacagg tggaccaatc acattaaagg tcaagctaat gattaaccag ggggtggaga 240 ctagagggta tataaagaga aaaccaggaa gtcaaaaatc agactgctgc agacctcgac 300 agagaacaca cgtctctgcg ctctggtgag tgaagatggc tactgggggg ctagctaaat 360 gggtgggagc tgtgcaggcc tttgggcatc catcttggtc ctacgtcatc aagctgcgtc 420 atggtcacgt gaccatgatt gagagaggct tctatgaact gtgtggggga gagaattgga 480 atatgctcca cgaactacct ggagacaatg gactgttaga gatgtgggag agcagagaaa 540 gcatgctaga gagttggagt ccaggagatg gacacagttg ggccatggca tgggcagggt 600 ggagagctgc tagagagacc atgcagagaa gacagtatgt caacgagccg acatttagtt 660 gctggagcca gagcgagctg ggggagaacg gatggcatgt gcatataatt attgggggtc 720 cgggactgac cagacaaaat gcagccatct cgaggtctat actctgcact tcattcttta 780 aacaccttct gatcactatt agacagagaa cacacgctcc atacactgtg ctatctagag 840 atgagctgaa tgcatggaac tggctacaaa agatagctca gagagtgatg aggggagaca 900 tggatgacat tgtagacatc ctgaagtgca gaaaggccaa cggcacgctg gtagctcagg 960 cgatcaacgg cacagaattc atcactagat atatgctacc taaaaataga aaggtggcta 1020 acacagtctt aacgagacac actacaccag aacagagcta cgactctact tggggtaaaa 1080 catatggctt cgcggtctgt aacggcgaga cggtctccga gttcacaagg aaagatctct 1140 ggaaagtcct ttacaacatc tacacagcgc atccagctga gaacatgctc aactcaaacc 1200 caagcgtgtg gggagacctt ccaagggtaa gcgctaaccg catcgacgcg gacgacgcgg 1260 aggccagatc aaggccgatt aaattatcca gaaaacaaaa aatcatggct gaagtgattc 1320 agcgagccac tgatgggtta ctgttaacct acaatgattt ggtagtacat ttgtctgatt 1380 tgatgttaat gcttgagggc atgccgggcg gaagtaaaac tgctgaacag ctgcttacca 1440 tgattcacat taaattgtgt gccaaataca atgcttatga atttatgctg atgaaaactc 1500 ctgctactca aaacatgaat ccgggagcac cacactatga ctgccaggga aacttggtct 1560 ttaagctgct caacttacaa ggatacaatc cttggcaagt ggggcactgg ttagtcatga 1620 tgctttctaa aaaaacgggg aaaagaaatt ctactctttt ctatgggcca gcgagcacgg 1680 ggaaaaccaa tctcgctaag gccatctgcc acgcagtggg gctatacggg tgcgtgaacc 1740 acaacaacaa acagtttcct tttaacgatg cacccaacaa aatgatcctg tggtgggagg 1800 aatgcatcat gactacagac tacgtagagg cagcaaagtg tgtgctcggg ggaactcacg 1860 tcagggtaga cgtgaaacac aaagattcta gggagctgcc tcagattcca gtgcttcttt 1920 cgagcaacca cgacgtatat accgtcgtgg ggggaaacgc cacgtttgga gttcacgcgg 1980 caccgctcaa agaaagaatc actcagatga attttatgaa gcagctccct aacacttttg 2040 gagaaatcac tccgggcatg atttcaaatt ggctgtctca ctgcgcgcac attcaccaag 2100 aacatctgtc gctggaaggc tttgctatta aatgggacgt gcagagcgtg ggaaacagct 2160 ttcctttaca gactctctgt cctggccatt cacagaactg gacattcagc gaaaacggcg 2220 tctgctggca ctgcggaggt ttcatccagc caacaccaga atcagacact gactctgacg 2280 gagatcctga ccctgacggt gctgttgctg gcgatagcga tacttctgct aacagtgagt 2340 ctacagtatc gtttagcagt aacgactcag gactaggatc cgtcacttca tcagctccat 2400 cggtacctga cagagccgag gaaatagagg agattcccag tgagtgcttg gagtggatgc 2460 gggaggaggt tgatagactg agcgctcacg acatcaactc actcgctcac caagctactg 2520 ggttcatcct agatcccatt ccagaagaac cagaagaaag ggagcgggat ctggctagag 2580 aggacgccga gccagaagca tcgacgagtc acactccagc taccaaaaga gctcgcgtgg 2640 aggaaggtga gccgtgggat ggaacgcagc cgatcaccga gggagactgg atcgacttcg 2700 agtcgagaca aaagcgacgc agactggagc gagaggagaa gggaggagag gacgaggaca 2760 tggaagtcca ggagtccgat ccgagcgcat ggggagagaa gctggggatc gtggagaagc 2820 cgggagaaga accaatcgtc ctctactgct tcgagacctt accagaaagc gacgaggaag 2880 gagacagcga caaagaaaac aaaacacaca ccgtttaacg tgtttagcgc tcaccgagca 2940 ctctccaaaa cagatctcca gttctgcggc ttctactggc actcaactcg actagccagc 3000 aaaggaacta atgaaatatt caatggacta aaacaatcat ttcaatcaaa agcgattgac 3060 gggaaacttg attgggaagg ggtgggagaa ttgttatttg agcaaaaaaa atgtttagac 3120 acttggtata gaaacatgat gtatcacttt gccttggggg gtgattgtga aaaatgtaat 3180 tactgggatg atgtgtacaa aaaacacttg gctaatgtag acacttattc tgttgcagaa 3240 gagataactg attctgaaat gctggaagcg gcagaagctg ttgatgccgc caaccaataa 3300 agctaattca aaaaaaggcc tgacattacc tggctacaat tatttgggtc cattcaattc 3360 tttattcgcg ggcgcgccag tgaataaagc agacgcggca gcgcgaaaac acgactttgg 3420 ctattctgac ttgttaaagg agggaaagaa tccctaccta tactttaaca cacacgacca 3480 aaacctcata gacgaactca aagacgacac ttcctttggc gggaaactcg caagaggagt 3540 gtttcaaata aaaaaagcac tggcgccagc tctgccaggc acatccaaag gaggagacaa 3600 agccttaaaa agaaagctat actttgcgcg ctcaaacaag ggcgccaaaa aagcaaacag 3660 agaacctgca ccaagcacat ccaatcaaca gaacatggag gtatcaaatg atatacctaa 3720 cgacgaggct ggcaatcagc caattgaact ggcgactcgg tccgtggggg gatcgggttc 3780 ggtgggtggc ggcggccgag ggggctctgg agtgggctac tcaactggcg gatggacggg 3840 gggcaccata tttagcgaga acattgtggt cactaaaaac actcgccagt ttatatgtga 3900 catcaaaaac ggccatctct ataaaagcga ggtgcttaac actggtgaca cggctcacag 3960 gcaatatgcc attaccactc cgtggagcta ttttaatttc aaccagtaca gctctcactt 4020 tagtcctaat gactggcaac acctggtcaa cgactacgag agattcagac caaaagccat 4080 gatagtgaga gtatacaacc tgcagataaa acagatcatg acagacggag ccatggggac 4140 cgtctacaac aatgatctga ctgcaggcat gcacatcttc tgcgacgggg atcacagata 4200 cccatacgta cagcatccat gggatgacca atgcatgcca gagctgccaa acagcatatg 4260 ggagctacca caatatgctt acataccagc tccaatatca gtcgtagaca acaacactac 4320 aaacacagta gaagaacacc tactgaaagg agtacctcta tacatgctgg aaaactctga 4380 ccacgaagtg ctacgcacgg gagaatctac agaatttaca ttcaactttg gagactgcga 4440 atggatagaa aacaacatca cattcagcat gcctcagatg atgtacaatc cactggtcag 4500 aagcagaaga atctactcat acagcggacc aaacaaccaa acaagcaacg cattccagaa 4560 tgcagcactg agaaccagca actggatgtc aggaccagga atcgcaaggg gaacacacaa 4620 cgcaactctg caaacacaat ctgcaggggc actggtgacc atggtaacta acggagcaga 4680 cgtctccggg gtgggagccg tgcgagtagg atactcgacg gatccaatct acgggggaca 4740 gcaaccagat tcagacctgc tgagactgag atactccgca tcggcagcag aaggacaaca 4800 aaacccaata ttggaaaacg cagcaagaca cacttttacc agagaggcga gaacgaaact 4860 gatcacggga tccaacggag cagacggaaa ctacaaagaa tggtggatgc taccaaacca 4920 gatgtgggac tcggcgccta tctcgagata caatccaata tgggtcaagg taccgagagt 4980 caacagaaag acactcctgg acacgcaaga cggatccatt ccaatgtcac atccgccagg 5040 aaccatcttc atcaagctag caagaattcc agtaccagga aacggagact cgttcctcaa 5100 catctacgtc accggacaag tctcatgcga agtcgtctgg gaggtagaaa agaggggcac 5160 caaaaattgg agaccggaat acatgcactc agcaacaaac atgtccgtcg atgcatacac 5220 catcaacaac gccggcgtct acgcaggcgc ggtacaaaac gcagacgtca tgcagacaag 5280 attcaatcac cacaaagtcc tgtagggggc gcaagaaaaa agacactcta tacacccgct 5340 ttatatattt ttacactgat tcactctttc cgccatcttt tagttgtatt cttagttatc 5400 aataaaggcg cggagcgcca taaaaaatta tgtcatatgg cgcttcgcgc ctttattgat 5460 aactaagaat acaactaaaa gatggcggaa agagtgaatc cgtgtaaaaa tattt 5515 //