ID DQ318776; SV 1; circular; genomic DNA; STD; PRO; 3607 BP. XX AC DQ318776; XX DT 04-AUG-2006 (Rel. 88, Created) DT 04-AUG-2006 (Rel. 88, Last updated, Version 1) XX DE Candidatus Phytoplasma australiense plasmid pPAPh2, complete sequence. XX KW . XX OS Candidatus Phytoplasma australiense OC Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; OC Candidatus Phytoplasma; 16SrXII (Stolbur group). OG Plasmid pPAPh2 XX RN [1] RP 1-3607 RX DOI; 10.1016/j.plasmid.2006.02.001. RX PUBMED; 16620976. RA Liefting L.W., Andersen M.T., Lough T.J., Beever R.E.; RT "Comparative analysis of the plasmids from two isolates of "Candidatus RT Phytoplasma australiense""; RL Plasmid 56(2):138-144(2006). XX RN [2] RP 1-3607 RA Liefting L.W., Andersen M.T., Lough T.J., Beever R.E.; RT ; RL Submitted (07-DEC-2005) to the INSDC. RL AgriGenesis Biosciences Ltd, 1 Fox St, Auckland, New Zealand XX FH Key Location/Qualifiers FH FT source 1..3607 FT /organism="Candidatus Phytoplasma australiense" FT /plasmid="pPAPh2" FT /isolate="NZPh2" FT /mol_type="genomic DNA" FT /db_xref="taxon:59748" FT CDS 706..1173 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q0QLC8" FT /protein_id="ABD04141.1" FT /translation="MQQLFNFNIEEIINKIKLYATIIITFIKTTFNNIIAIKNVDFHIG FT NILNSSGIIINFILSLFYILIFITFLVLLGSIFNIIKTTIKIIFFPFKILFIGVFKFIQ FT FLIGPKPKPDVSISNKNQDDEIKKQLFLLKLQNGKLKKQLEKKVGKTNVKK" FT CDS 1160..1594 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q0QLC7" FT /protein_id="ABD04142.1" FT /translation="MSKNNSSKISLVFVFWALSISAAVIFILFLVFLSLKQEKESKPKE FT NKTEDKQNEIAKKQQEQYNNLLNKLDKEIDKITSNDENKTTKKETFRDIYNSDNLVKTT FT SFHEDGKTPREIIERDPETDTTRKITYYNLDGTIKETYYF" FT CDS 1597..2061 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q0QLC6" FT /protein_id="ABD04143.1" FT /translation="MHKKRKLILKIWFIFLAIILFLLLLLLGLNLPKLPKFKSKQTKTQ FT TQSQTQLETKNIYDFNYIENLIKLMNKLNNYKGLSLDIPNKQNQKDKLKDLKNKSSEYE FT TDKRSSYDFPLPNLIPEPETVNKLLPLILGAAALGLLATAPQALPLLALL" FT gene 2118..3248 FT /gene="Rep" FT CDS 2118..3248 FT /codon_start=1 FT /transl_table=11 FT /gene="Rep" FT /product="replication associated protein" FT /db_xref="GOA:Q0QLC5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="UniProtKB/TrEMBL:Q0QLC5" FT /protein_id="ABD04144.1" FT /translation="MKKENKMKKETKTNFRLRTRDIFLTYSKCPLGKEKIHNHLKQLLA FT SKKKEIKYIISNNENHQDHKEIHTHVFIQLKKQIEITNQRFFDIEGYHPKIETARDVEK FT SVSYIKKDKDFIDEGEYIQKKYVRQNQKEERKQLIYDYICEKRIEYYNDNDNSLNINKI FT RKEIDDFILKIDRDFYYEQIELIDRILNRRFIRKKEELADTIKLFGKSHYQFNSFKTNS FT ETNEIIDAINSQLLSEHRPKSIVIEGESRMGKTQFILSYLTHKNLQYNYIKGEFDFSKK FT TYKDYYKIDVYDDFGVPEINSQGLQKNIIGGQECFTCNVKYAPKRQLSGNKLSIFLVNP FT DNSFKGYCEWSRNNGHKFHKYIEENCIFIYVSDKLF" XX SQ Sequence 3607 BP; 1421 A; 525 C; 422 G; 1239 T; 0 other; aagcttacta agttctcttt tttttctttt tttatcaatc ttaggaaaaa gtataaaaaa 60 cctagttttt atctaggttt ttcctaatgt ttttttccct cacatttttt ttaatttcaa 120 caaaacccta aaaaacctag tatatttcca tgggggggtt cttcaacttt atacctgaaa 180 tggaaatgtt ggggactttt ttttatttta ttaggtattt actatctttt atgcgcgtgg 240 ggaataacat tgccccacgc acatctctag tattttccta gcttttttta gtccccaaaa 300 actccccaaa atatcaattg tggggagtta ttttcaattg tggggacttt tttaattttg 360 accgttaaat ggaacatttg acgggcacaa ctggcgctta aaaacttgtt ttttaagtga 420 cacattcttt tttttttttt tcttttactt cttctctttt tatgttaaaa tataagtgta 480 ttcccaacca cacaaataca acttgatata aaattataat tttaatatgt ttttaatgtt 540 aaaattatta atgaccctat tatatatgtt cgtggttggg cgtatatata gggtcgtttt 600 tttatacctt aattccctat aaaaagataa aaaaaatagt tatataagcc ccgatctcgc 660 aaagaaaaaa aggtttatat aactaacata gaaaggtcac aaattatgca acaattattc 720 aatttcaaca tagaagaaat tattaacaaa ataaaactct acgccacaat tattataaca 780 tttattaaaa ctactttcaa caacattatt gccatcaaaa acgttgattt tcatatcggc 840 aatattttaa acagttcagg aatcattatt aacttcattt tgtctttatt ttatatctta 900 attttcatca cttttttagt tcttcttggt agtattttta acataattaa aacaactatc 960 aaaatcattt tctttccatt taaaatatta tttatcggtg ttttcaagtt catccagttt 1020 ttaattggcc caaaaccaaa acccgatgtt tctatttcaa ataaaaacca agatgacgaa 1080 ataaaaaaac aattgttcct tttaaaatta caaaatggta aattaaaaaa acaattagag 1140 aagaaagtag gcaaaacaaa tgtcaaaaaa taattcttct aaaataagtc tcgtttttgt 1200 tttttgggct ttatcaatat ctgctgcagt tatttttatt ttattccttg tttttttatc 1260 tttaaaacag gaaaaagaat caaaaccaaa agaaaataaa acagaagata aacaaaatga 1320 gattgccaaa aaacaacaag aacaatataa taatttatta aataaacttg ataaagaaat 1380 agataaaata acatctaacg acgaaaataa aacaactaaa aaagaaacct ttcgggacat 1440 ttacaattcc gataacctag tcaaaacaac tagttttcat gaagacggta aaacacctag 1500 ggaaattatt gaacgcgacc ccgaaacaga tacaacaaga aaaataacct attacaacct 1560 agatggaaca attaaagaaa cttattattt ttaatcatgc ataaaaaaag aaaattaata 1620 ttaaaaatct ggtttatatt tcttgcaatt attcttttct tgcttctctt acttttaggt 1680 cttaatttac ctaaattacc taaattcaaa tccaaacaaa ccaaaactca aacccaatct 1740 caaacccaat tagaaaccaa aaatatttat gactttaatt acattgaaaa cctcattaaa 1800 ttaatgaata aactaaataa ttataaaggc ttaagtttgg atataccaaa caaacaaaac 1860 caaaaagata aattaaaaga cttaaaaaat aaatcttctg aatacgaaac agataaacga 1920 tcttcatatg attttccttt acctaattta atcccagaac cagaaacagt taataaatta 1980 ctccctttaa ttctcggtgc tgctgctctt ggattacttg ccacagcccc tcaagcactt 2040 cctctattag ccttacttta atataaaaac aactccctat tttaataggg agttgttata 2100 gaaagagaat atacaaaatg aaaaaagaaa ataaaatgaa aaaagaaaca aaaactaatt 2160 ttagattacg aaccagagac atctttttaa cttattccaa atgtcctttg ggtaaagaaa 2220 aaatccataa tcatctcaaa caattattag cttctaaaaa aaaggaaatt aaatatatta 2280 tttctaataa cgagaatcac caagatcata aagaaatcca cactcacgtt tttattcaat 2340 taaaaaaaca aattgaaatt acaaaccaga gattttttga tattgaagga taccatccta 2400 aaattgaaac tgcccgtgat gtagaaaaat cagttagtta tattaaaaaa gataaagatt 2460 ttattgatga aggtgaatat atacaaaaaa aatatgttcg tcaaaaccaa aaagaagaac 2520 gtaaacaatt aatttatgat tatatttgtg aaaaaagaat tgaatattat aatgataatg 2580 ataattcttt aaatataaat aaaataagaa aagaaattga tgattttata ttaaaaatcg 2640 accgtgattt ttattacgaa caaatagaat taattgacag aatattaaat agaagattca 2700 ttagaaaaaa agaagagcta gctgatacaa ttaaattatt tggcaaatcc cactaccaat 2760 ttaattcatt caaaactaac tctgaaacta atgaaataat tgatgctatt aattctcaat 2820 tattatcgga acacagacct aaatcaattg tgattgaagg agaaagcaga atgggaaaaa 2880 cccaatttat acttagttat ttaacacata aaaaccttca atataattat atcaaaggtg 2940 agtttgattt tagcaaaaaa acttataaag attattataa aatagatgtt tatgatgatt 3000 ttggtgttcc agaaattaat agtcaaggtt tgcaaaaaaa catcataggc ggtcaagaat 3060 gttttacttg taatgttaaa tatgctccta aaaggcagtt atcgggtaat aaattaagta 3120 tttttctagt taatccagat aattcattta aaggttattg cgaatggtct cgtaataacg 3180 gtcataagtt ccataaatat atcgaagaga attgtatttt tatttatgtt tctgataaat 3240 tattttaatt tcggtcccgc ggaatgttaa tttatttaac ctattaatct aaattacccc 3300 ttaaaactca atattttacc ctttaaacag ttttttttaa tgtgttttga tttaaacctc 3360 aaatcacatt tttttttata caacacactt ccttttttag atctgtgttt gctgattcca 3420 cttgtttaat cctcacacaa ttaaaagtgc tcttttttaa gagagcttgg tagcttcatc 3480 cgttgtcaat cctcacaata taaaaaacat aaccattaaa aaacgaatgt aaaaaaaagt 3540 atttttttta tgtgagtttt tggggttatg ttatattgtg agttaggatt gacaaaacgg 3600 ataaatg 3607 //