ID DQ286581; SV 1; circular; genomic DNA; STD; PRO; 4892 BP. XX AC DQ286581; XX DT 11-DEC-2005 (Rel. 86, Created) DT 12-DEC-2007 (Rel. 94, Last updated, Version 2) XX DE Bifidobacterium sp. A24 plasmid pBIFA24, complete sequence. XX KW . XX OS Bifidobacterium sp. A24 OC Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; OC Bifidobacteriaceae; Bifidobacterium. OG Plasmid pBIFA24 XX RN [1] RP 1-4892 RX DOI; 10.1007/s10529-007-9504-5. RX PUBMED; 17700996. RA Park Y.S., Kim K.H., Park J.H., Oh I.K., Yoon S.S.; RT "Isolation and molecular characterization of a cryptic plasmid from RT Bifidobacterium longum"; RL Biotechnol. Lett. 30(1):145-151(2008). XX RN [2] RP 1-4892 RA Yoon S.-S., Park Y.-S., Kim K.-H., Oh I.-K., Park J.-H.; RT "Sequence analysis of plasmid pBIFA24 from Bifidobacterium sp. A24"; RL Unpublished. XX RN [3] RP 1-4892 RA Yoon S.-S., Park Y.-S., Kim K.-H., Oh I.-K., Park J.-H.; RT ; RL Submitted (09-NOV-2005) to the INSDC. RL Department of Biological Resources and Technology, Yonsei University, 234 RL Maeji-ri, Heungeop-myeon, Gangwon-do, Wonju 220-710, Korea XX FH Key Location/Qualifiers FH FT source 1..4892 FT /organism="Bifidobacterium sp. A24" FT /plasmid="pBIFA24" FT /strain="A24" FT /mol_type="genomic DNA" FT /db_xref="taxon:359132" FT CDS join(4204..4892,1..46) FT /codon_start=1 FT /transl_table=11 FT /product="RepA" FT /note="replication protein" FT /db_xref="GOA:Q2PZL5" FT /db_xref="InterPro:IPR000525" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q2PZL5" FT /protein_id="ABB99375.1" FT /translation="MSDEIVKYSNQFNNQALRKFTALDLDLLMAIASRVRDKGTDEVAF FT TFEELKRLAGLQRNMTNDEFAKQIANVNRRLLALNFEFQNEEHDIIQFALFAGFVTSPT FT KRTLTVSVNSRFSFLLNDLTSQFTRFELAEFTALRSSYAKECYRRLKQYRQTGVWKVSL FT EDFRRLLDVPKSYRPSEINKYVLKPIEEELGPLLNLKVHRKYLKKKPGRGRASLVGFEF FT EFDPEKVPAALPLRAWSCPAPW" FT CDS 925..1749 FT /codon_start=1 FT /transl_table=11 FT /product="MembA" FT /note="transmembrane protein" FT /db_xref="UniProtKB/TrEMBL:Q2PZL4" FT /protein_id="ABB99376.1" FT /translation="MHDFSGMADAGGMGYPPSPLIGPWPRVFGCGAGVFKHQPFALLVC FT SIQGPRAIISLSDARLAYLIKGAKMLRTKHLKMAVVPMTLLALLSTAVPVASAQETTDE FT SFYELTTTPSGGDMIVGEPGTTILFDSSNGELVDVLPPSEAEDYSVTVSRGCADSNAGC FT WAGGNALGDMQFAGTGTATGSWPYRNSYTTGNKSGQITFAINGVTYTPVAAGPWMRICH FT GRTALASTAYPLPAGKDVFLNFGPVSSDAGLCVPGVLTGRVRGLPCPSPCRC" FT CDS complement(2091..3074) FT /codon_start=1 FT /transl_table=11 FT /product="MobA" FT /note="mobilization protein" FT /db_xref="GOA:Q2PZL3" FT /db_xref="InterPro:IPR005053" FT /db_xref="UniProtKB/TrEMBL:Q2PZL3" FT /protein_id="ABB99377.1" FT /translation="MLRWYIQRKRALPRGHSVGAKRAPLGSAPRPGGVPATSPVEWPTG FT LPALWIPGKEYSPVAIYSLHVSNVSRARLQRRRLLLVHHLASDARRAHRRGVQRVRPQG FT SASSMYARCCPSGAPGEYLDPERLFNAVEMAEKRSDARPAKKIMVALPREFDARERFRA FT LEDFISWNITANGYACTYAIHTDKDGRNPHAHILVANRRIDPKTGRWAAKSRSEFALDA FT NGRRIPVIDPDTGRQKIGARNRKVWKRVNVSNNPLDSKEFLERLRREWADSCNALFPGY FT AVIDHRSFKARGIERIPTSTRDTPAARWRNAAAGATCARRTGASRP" XX SQ Sequence 4892 BP; 869 A; 1419 C; 1603 G; 1001 T; 0 other; ggcggcgctc ccgctccgcg cgtggagctg tccggctccg tggtgaccga tgaggcgagg 60 aagtcgctca ggggacgtgt cgaagacgcc cgtgcccgat ctgtcggtgc cgggcgaggg 120 accggcgctc gaccctgata ctcaggcgtt cctcgacgcg cacggcggtc atggattcgc 180 cggtgccgag gggtatgtct ccgactggcc gagtgctgcg tgatggtatg tgaaagcccg 240 tccgggcttg cgctcggacg ggccgggtgc cgtttagcgg ctgtttctca tcgcccagac 300 ggccaggccg tgaggatgat gtccgcggcg atgggatgca ccgccggtgc gagacagacg 360 gcgatgaccg ccatcagcaa atcaagatcg agcgcggtga acttgcggcg gaacgagcca 420 ggctgaactg gatgcgtata aggcggccca cgatggtctg acaccattcg aggtggccag 480 acgcagccat gattcacagg ccatgcccga tgatcggatg gagcctggta tcgagccgac 540 tcttttctga acaaggggcc tgccgcgggc tccgacccgc ggcaggttgc gccgtcaacg 600 gcggctggat gccatcgccc agacggccag ggccgtcacg gtgatgtcgg ccgcgatggg 660 atccatcacg ggagcgaggc agatgacgat gaccgccatc agccatatcc agggccggcc 720 gtgcggcccc ttgttaccca tgcgcatgtg ctgcgccttt cgttcgggcc gcgccgcgac 780 tggcgcggca gcgtcgcccg gcggatgccg ggcggtcggt tttcgtccct gctacaagac 840 gtccatcgac gacgccaatc gtatcggcta agatggaaac gccggcggag gcgctgctaa 900 cttccccctt acgatcaggc gggcatgcat gacttttcgg ggatggccga tgccggcggg 960 atgggttacc cgccatcccc tttgattggg ccgtggcccc gcgtcttcgg atgcggggcc 1020 ggcgtcttca aacaccaacc ctttgcatta ctggtctgtt caatccaagg tccaagagct 1080 ataatttcct tgtcagacgc acgtctggca tacctaatca agggggcaaa aatgttacgt 1140 accaagcatt tgaagatggc agtggttcca atgactctgc tggcgctcct gtcgacggca 1200 gtcccggtgg catctgctca agaaaccact gacgagtcgt tctatgaact taccaccact 1260 ccgtcgggcg gggacatgat tgtcggcgaa cctggcacaa cgattctctt tgattccagc 1320 aacggcgaat tggtggacgt gctgccgccg agcgaggctg aagattattc ggtaactgtc 1380 tcgcgtggat gcgctgattc caatgctgga tgctgggctg gcgggaacgc tttgggtgac 1440 atgcagtttg caggcaccgg aacggcaacg gggtcctggc cgtatcgcaa cagctatacg 1500 accggcaata agtcgggaca gatcaccttc gcaatcaatg gagttacata cacccctgtc 1560 gcagctggtc cgtggatgcg catctgccac ggcagaacgg ctctggcgtc gacggcgtat 1620 ccgttacccg ctggtaagga tgtctttcta aatttcgggc cggtgtcttc ggatgccggc 1680 ctttgcgttc ccggcgttct cacaggccga gtccgtggcc tcccgtgccc cagcccatgc 1740 cgatgttgag cgggtcggcg gggtcggaga ggtcccatgt ctcctccatg tcgggttcgg 1800 ctgtttttcg gcctgtttgc gttcgttttc ggccagccgc tcgtcaagcc gtgtcttgaa 1860 cctgtcggtg agcgcctttt tcgtcctgat gggcttcggg ggttcctgcg gggcctgtgg 1920 cggcgtttca cgagcctgcg ggcgttcctg tggcctttcg gccggttcag ggcttgaagg 1980 ggcctgtggc gcgcctgagg gccgttggcg gcgtttgacg gccgtcagga tgccttgcgc 2040 ttggtcggag agccgcccga tcatggccct aagcgcgtcg aggagccggt tcagggcctg 2100 gatgcgccgg ttctcctcgc acaggtcgcc cctgccgccg cgtttctcca tctcgcggct 2160 ggcgtatccc tcgtggatgt tgggatgcgt tcgatgcccc gcgccttgaa gctccgatgg 2220 tcgatgacgg cgtatccggg gaacagggcg ttgcaggagt cggcccactc gcgcctgagc 2280 ctttcgagga actccttgga gtccaagggg ttgttgctca cgttgacgcg cttccagacc 2340 ttgcggtttc tggcgccgat cttctgccgt ccggtgtcgg ggtcgatgac ggggatgcgc 2400 cggccgttgg cgtccaacgc gaactcgctg cggctcttcg ccgcccatct gccggtcttc 2460 gggtcgatgc gccggttggc gacgaggatg tgcgcgtggg ggttacgtcc gtccttgtcg 2520 gtgtggatgg cgtacgtgca ggcgtagccg ttggccgtga tgttccatga gatgaagtcc 2580 tccagtgcgc ggaagcgttc gcgggcgtcg aactcgcggg gcagggcgac catgatcttc 2640 ttcgcgggcc tcgcgtcgga acgtttctcg gccatctcga cggcgttgaa caaacgctcc 2700 gggtcgaggt actcgccggg cgcgccactc gggcagcatc gtgcatacat gctcgacgcg 2760 ctcccctgcg gccgaacccg ttgaacgcct cgccggtgcg ctcgtcgcgc atccgacgcg 2820 aggtgatgta cgagcaggag gcgacggcgc tggagccgcg cacggctcac gttcgacacg 2880 tgcaacgagt agatcgccac gggactgtac tcctttccgg gaatccaaag ggccgggagg 2940 cccgttggcc actccaccgg ggaggtggcc ggcaccccgc cgggacgggg cgcggatcca 3000 agcggcgcac gcttggcccc cacggagtgg cccctcggga gagcgcgctt acgctgaatg 3060 taccaccgta acatgtaagt gcgccctcaa tgaaattgag ggacttccac ctgaccttgc 3120 ggggatggtt ccgttaccgg cgtgtcggtc gacgcataga gcggtgcatg gacgaatttt 3180 ctgatgctct tatgcaatgg gcttggcgat tcatgggatt gatttacggg gagtttcctg 3240 agactgcggc aaggctgatc ctctcggctg ctcttcgcaa gctgccgcag cttgcgaaga 3300 ggcttttccg gtcggtgttt ccctcccgtg gccgtcatgc gcgcggaaat cggcgggggc 3360 ggcacgttcg gcattgatga acgcttcgcc ctcgcggctt ggatgtccaa accggctccg 3420 ttcttccggg tttaggtttg gtgtgtagac gccgtgcccc gtgccgtgct gccgtggggt 3480 ctagcgtcct gattgataac cgacggaacg cagggaggaa ccgatgacca ggagcgtcga 3540 ggagcagatg gccgacatcg agcgccggat gaagcagctc agggcgcgca aacagcgcat 3600 cgtggctagg gagaacgcca aggcgcgcaa gcggcgcacc catctgatca tccggctggg 3660 cggcatcctc tccaacgagg gcgtgcttgg ctacgacgag ggcgtctgga acgacgagga 3720 caaccggcaa aggctgctgg acatgctcaa ggcccatgcc gccgaactgc gcgcatgggc 3780 ctctgacgcg ggcgtgaggc tccccagcgc tgagtcggcg ggtgagctgc gggtaacagg 3840 ttcgtgacct gccccaagag cctcagatac aggagcagcc gggctatggc taccagcccg 3900 gattccaaca gccacagcaa tggcagcagc agccttggaa ctgagtcggt ttcttctctt 3960 catcggggcg gagccccttt ttatagaatc ttttgtactc ttttagactc cccgcaggcc 4020 ttacggcagt aggggaaacg cactattaaa ggggagaaaa tgggagatta aaggggaggt 4080 tttgggaatt atttagggga ggttttggga gaataaagga cgcttttgag gaataaaaac 4140 gaggttttgg gagaataaag ggtagaaaat ataaaaatct cgtttttatg gtagaatgca 4200 gtcatgtccg atgagatcgt gaagtactcg aaccagttca acaatcaggc gctgcgcaag 4260 ttcaccgcgc tcgatcttga tttgctgatg gccatcgcgt ctcgcgtgcg ggacaagggc 4320 acggacgagg tggcgttcac gttcgaagaa ttgaagcggc tggccggact tcagaggaac 4380 atgaccaacg atgagttcgc caagcagatt gccaatgtga accgtcgcct gctcgcgctc 4440 aacttcgagt tccagaacga agagcacgac atcatccagt tcgccctgtt cgcaggcttc 4500 gtcaccagcc cgaccaaacg cacactcacc gtatcggtga actcgcgctt ctcgttcctg 4560 cttaacgacc tcacctcgca gttcacccgc ttcgagctgg ccgagttcac ggccctgcgc 4620 tccagctacg ccaaggagtg ctacaggagg ctcaagcagt accgacaaac cggtgtgtgg 4680 aaggtcagcc ttgaggactt ccgccgactg ctcgacgtac ccaaatcgta tcggccgagc 4740 gaaatcaaca agtatgttct taagccgatt gaggaggagt tggggcctct gctgaatctg 4800 aaggtgcatc gcaagtacct gaagaagaag ccgggacgtg gccgcgcttc ccttgtcggg 4860 ttcgaatttg aatttgaccc ggagaaggta cc 4892 //