ID DQ103758; SV 1; circular; genomic DNA; STD; PRO; 4815 BP. XX AC DQ103758; XX DT 01-NOV-2006 (Rel. 89, Created) DT 11-SEP-2007 (Rel. 93, Last updated, Version 3) XX DE Bifidobacterium pseudolongum subsp. globosum plasmid pASV479, complete DE sequence. XX KW . XX OS Bifidobacterium pseudolongum subsp. globosum OC Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; OC Bifidobacteriaceae; Bifidobacterium. OG Plasmid pASV479 XX RN [1] RP 1-4815 RX DOI; 10.1016/j.plasmid.2007.02.004. RX PUBMED; 17467795. RA Sangrador-Vegas A., Stanton C., van Sinderen D., Fitzgerald G.F., RA Ross R.P.; RT "Characterization of plasmid pASV479 from Bifidobacterium pseudolongum RT subsp. globosum and its use for expression vector construction"; RL Plasmid 58(2):140-147(2007). XX RN [2] RP 1-4815 RA Sangrador-Vegas A., Stanton C., Ross R.P.; RT ; RL Submitted (24-JUN-2005) to the INSDC. RL Dairy Products Research Center, Teagasc, Moorepark, Fermoy, Co. Cork, RL Ireland XX FH Key Location/Qualifiers FH FT source 1..4815 FT /organism="Bifidobacterium pseudolongum subsp. globosum" FT /plasmid="pASV479" FT /sub_species="globosum" FT /mol_type="genomic DNA" FT /db_xref="taxon:1690" FT CDS 72..653 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A0EJ80" FT /protein_id="AAZ30036.1" FT /translation="MTHWIPLTDYVDMLHGYKSAATIKAYANGSISTDGKPRIEAKLTK FT TDPHKRATWHVDVDGERAKALISKADAWKAEQDKPTIEELYDDAQLEIASLRATIDKLN FT TTIASKSKTIDEMQETIDKLTTTIDSMKPTRTHHTTKDQAERDAQLLAQWEAWHEANPD FT GTRTEFAAAIGRPATTVRGGLRRALKAIKQ" FT CDS complement(656..1792) FT /codon_start=1 FT /transl_table=11 FT /product="replication protein" FT /note="similar to Bifidobacterium breve 2258 plasmid pCIBb1 FT replication protein" FT /db_xref="GOA:A0EJ81" FT /db_xref="InterPro:IPR000989" FT /db_xref="UniProtKB/TrEMBL:A0EJ81" FT /protein_id="AAZ30037.2" FT /translation="MMIRWHGGESKGFDPLSLPRCAKCGMSVKSAVGISTNGKRSAFSG FT VMRCGSIWACPVCSGIIRTARADEVSKMVERNASGALVFGTLTVRHHAGMPLQMLLDAV FT MAGWQKMVTGSPWKRMRQRYGVQGYVRATEVTYSRGNGWHPHIHFIMPLDAPLSGEEAQ FT ALRTWLIDRWRSMVMRVAKKYGDWDIRPDDAHGIDLQVKHDYKACEKAAEYITKWQADK FT GMAELGMEIARGDVKGGRAAGSINPFQLLDEGMLGLSDSQRDALWHEYYAATMRRRCIT FT WSRGLRERYEVEEVEDEDLVTAEDKPEELVEYVAPRRVYERLRKTAPALLADVLEAAER FT CDWAFVDSVLHGVHLTDAQQDMLADGEAHMFDFLPKRE" FT CDS complement(2113..2895) FT /codon_start=1 FT /transl_table=11 FT /product="FtsK-like protein" FT /note="similar to Bifidobacterium breve 2258 plasmid pCIBb1 FT FtsK" FT /db_xref="GOA:A0EJ82" FT /db_xref="InterPro:IPR002543" FT /db_xref="UniProtKB/TrEMBL:A0EJ82" FT /protein_id="AAZ30038.2" FT /translation="MGADGVLRVGLLEDGSPAELTLRNQSGVVVGGVPGSGKTAGMTVI FT ALAMLRAGANLHVIDGKGGDDWGWCAPAATDFARDDISVVHEMLLSVQAAMRRRLASMR FT TDYGQSNYWNIPAADRPPLEVIIIDECQTFFDAKSVLGDKETKQKAAEITAIATDLVKK FT GRSAGYLVFVMTQKPTADSIPTALRDNCGVRVCFRVATIEAAKAVLGDVPDGSPSPVEI FT PRSRVGGAVIGRDDGTLATCRFAYVDEAAATRFAQGAL" FT CDS complement(2946..3419) FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A0EJ83" FT /protein_id="AAZ30039.2" FT /translation="MAVLWVYDLHTAAIAVGVVAVLLAVTSLCWRPMRSAMSGGWVALV FT PLGGILARANQIRTCEALERAGIYKRRKPTATIPAHTVHRRSCTTVRFDGSGEAGMSPD FT KLAKRLAENARVWGARSYAISEEANRPGRYTLRLYRSEVAPSALDTDIVGTVA" FT CDS complement(3527..3916) FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A0EJ84" FT /protein_id="AAZ30040.2" FT /translation="MFSLSSFALSATDIDGLFQTTRAFDPARSQPKKAYGTDDVALVDG FT RPVYTMPVQFIDETGVDTGVNVQVFDKPAQPIPALSRVSLTGALRVSAWVRDGRVHYTL FT TADGVEVEQLDVTPVAPAHALRGDD" FT CDS 4011..4535 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:A0EJ85" FT /protein_id="AAZ30041.1" FT /translation="MRYKKVKTQNPKLAQTFNANTNAAIYWCEANPEEWQSLLNEAVTK FT TLNQLEQILTGKEDEKTNPAYPASHELADTLAERGIIMYPQLIEMLICKKLEAVLDLEV FT ETTAGLLLADGFTKKNLAFFMDTSPSNLNVRYPHLNDIAAAQDEADATNQTQVVDMGNG FT ITREVFPNPRQ" XX SQ Sequence 4815 BP; 1105 A; 1560 C; 1294 G; 856 T; 0 other; taatttgact ttctatcgat agttatgtta tactatagat aacaaggcaa tcactatcga 60 taggaatcat catgacgcac tggataccac tcaccgatta cgtggacatg ctccacggct 120 acaagtcagc cgccaccatc aaggcgtacg cgaacggcag catctccacc gacggcaagc 180 cccgcatcga ggcgaagctc accaagaccg acccgcacaa gcgagccaca tggcacgtgg 240 acgtggacgg ggaacgcgcc aaggccttga tttccaaggc ggacgcatgg aaagccgagc 300 aggacaagcc gaccatcgag gaattgtacg atgacgccca actggaaatc gccagcctac 360 gcgccactat cgataagctg aacactacta tcgctagcaa gtccaagact atcgatgaaa 420 tgcaagaaac tatagataag ctaacaacta ctatcgatag catgaagccg acccgaacac 480 accacaccac caaagaccaa gcggaacgcg acgcgcagct actcgcacag tgggaagcat 540 ggcatgaagc caatccggac ggaacgcgca ccgagttcgc cgcagccatc gggcgaccag 600 ccacgaccgt gcgcggaggt ctacgcagag cgctcaaggc catcaagcag tagggctact 660 cccgcttcgg caggaaatcg aacatgtgcg cctcgccgtc ggcgagcatg tcctgctgcg 720 catcggtcag gtggacaccg tgcagcacgc tatccacaaa cgcccaatca caccgttcag 780 ccgcctccaa cacgtccgcg agcaacgccg gagccgtctt gcgcagccgc tcgtacacgc 840 ggcgcggcgc gacgtattcg accagctcct cgggcttgtc ctcagccgtc acgaggtctt 900 cgtcctcaac ctcctcgacc tcgtagcgct ctcgcagacc gcgagaccac gtgatacacc 960 gacgccgcat cgtagccgca tagtattcat gccagagcgc atcacgctgc gaatcagaca 1020 agccgagcat gccctcgtcc agcagctgga acgggttaat ggatccagcg gcacgaccgc 1080 ccttgacatc accgcgcgca atctccatgc caagctcggc catacccttg tcggcctgcc 1140 acttggtgat gtactctgcc gctttctcgc acgccttgta gtcgtgcttg acctgcaaat 1200 cgatgccgtg ggcatcatcg gggcgaatat cccaatcccc gtattttttt gctacgcgca 1260 tcaccatcga ccgccagcgg tcaatcagcc acgttcgtaa ggcctgcgct tcctcgccgg 1320 agagcggcgc gtccaacggc ataatgaagt ggatatgcgg atgccagcca ttgccacgcg 1380 aatacgtgac ctccgtagcg cgcacgtagc cctgcacccc gtagcgttgc ctcatgcgtt 1440 tccacgggct gccggtcacc atcttctgcc agcccgccat caccgcatcg agcagcatct 1500 gcagcggcat tcccgcgtga tgccgcaccg tcagagtgcc gaacacgagc gcaccagaag 1560 cgttccgctc caccatcttc gagacctcat cggcacgagc ggtacgaatg attcccgagc 1620 agaccggaca cgcccagatc gagccgcatc gcatcacacc cgaaaacgca ctgcgcttgc 1680 cgttcgttga aatgccaaca gcggatttca ccgacatgcc acacttcgca caacgaggaa 1740 gcgacagcgg gtcgaagcct ttactctcac ccccgtgcca gcgaatcatc atcgcccgcg 1800 aacttccacg tcgctcatac gaacgcgccc gcaaatcggc agaacgccgc gatttttcag 1860 ggggggttgc gttattagtg ttttcccaag gctcgccgct acgcggctcg cacgcggccg 1920 cgctacgcgg cttgacgccg ctacgcgccg ctcgcgtctc gcgtgtctcg atggcgggtg 1980 atacactggc catagcgcac ccctttcggg tgagtggtat tgcgtgcggt ttctctcgcc 2040 aaaggttgac cgcgtgcaaa ggtttttgga agcccccatt tcgggggctt ttccttttat 2100 tgctgctctc catcatagcg ccccctgtgc gaatcgtgtc gcggcagcct cgtctacgta 2160 cgcgaagcgg catgtggcga gcgtgccgtc atcacgtccg atgactgctc caccgacacg 2220 gcttcgcgga atctcgaccg gcgagggcga cccgtccggc acatcaccga gcacggcctt 2280 agcggcctcg atcgtggcga ccctaaaaca gacacgcacc ccgcaattat cgcgaagcgc 2340 agtggggatt gagtcagccg tcggcttttg tgtcatgacg aagacgaggt agccagccga 2400 gcgacctttc ttcacaaggt cagtggcaat cgcggtgatt tcagcagctt tctgcttcgt 2460 ttccttatcg ccgagcacgc tcttcgcatc gaaaaaagtc tgacattcat cgatgatgat 2520 gacctcaagc gggggacggt cagcggcggg aatgttccaa tagttcgatt gcccgtagtc 2580 ggttcgcata gatgctaatc gccgtcgcat ggcggcctga accgaaagga gcatctcatg 2640 cacaacactg atatcgtccc gcgcgaagtc cgtggccgct ggggcacacc agccccaatc 2700 atcgccaccc ttgccatcga tgacgtggag gttggcaccg gcacgcagca tggcgagggc 2760 aataaccgtc atgccagcgg tcttgccact gccgggcaca ccacccacaa caacgccgga 2820 ctgattgcgg agggtcagct cggcgggtga accgtcctca agcaagccga cgcgaagcac 2880 gccgtccgcg cccattggcg gtaaatccag cgtgctccgc gtctgccgat gccgatgcca 2940 ccacatcacg ccaccgtccc cacgatgtca gtatcgagcg ctgacggggc gacctccgaa 3000 cgatacaagc gcagcgtgta gcgtccgggg cgattagctt cctcactaat cgcgtatgag 3060 cgggcacccc acacgcgcgc attctcagcc aatcgcttcg cgagcttgtc aggcgacatt 3120 cccgcctcgc cagacccatc gaagcgcacc gtggtgcagg aacggcggtg caccgtgtgc 3180 gcgggaatcg tcgccgtggg cttgcgccgc ttatatatgc ccgcacgctc cagcgcctcg 3240 catgtgcgaa tctggtttgc gcgggcgagg ataccgccga ggggaacgag cgcgacccag 3300 ccgccactca tggccgaccg catcggacgc cagcacagcg aggtgacggc gaggaggacg 3360 gccaccacac caaccgcaat agcagcggta tgcaggtcgt agacccacag cacagccacc 3420 gccatgaccc acaggagcga gcaaaccatg gccatggcgc aatcggggcg cgagggagtg 3480 cgaggagagg tagataccct cgtctgaccg ccattagagg ggttcatcag tcatcacccc 3540 gcagcgcatg agccggagca accggcgtca cgtccaactg ttcgacctca acgccatcgg 3600 cggtgagcgt gtagtgcacg cgaccgtcac gcacccacgc ggacacacga agcgcacccg 3660 tcaggctcac gcgggagagc gccgggatcg gctgcgccgg cttgtcaaac acctgcacat 3720 tcacgccggt atcaacaccg gtttcgtcga tgaattgcac cggcatcgtg tataccggtc 3780 gaccatcaac aagagcgaca tcatcagtgc cataggcctt cttcggctga gatctagcgg 3840 ggtcgaacgc gcgcgtcgtc tggaaaaggc cgtcgatgtc ggtggcagac agggcgaaag 3900 aggagagcga gaacatgaag taatcctttc ttcataagag atttccattt aatatatcct 3960 catgatatca taaagatatg atatctcaac tctacgaata ggattacatc atgcgctaca 4020 aaaaagtgaa gacccagaat ccgaaactcg cccagacatt caacgcgaac acgaacgccg 4080 cgatttactg gtgcgaagcc aaccccgagg agtggcagag cctcctcaac gaggccgtga 4140 cgaagacctt gaaccagctt gagcagatac tgaccggcaa ggaggatgaa aagaccaatc 4200 cggcctatcc agcctcccac gagcttgccg acacgctcgc cgaaagaggc atcatcatgt 4260 acccgcagct catagagatg cttatctgca agaagctgga agccgtgctc gatctcgaag 4320 tcgagaccac agcaggacta ctactcgccg acggcttcac caaaaagaac cttgcgtttt 4380 tcatggacac cagcccgtcg aacctgaacg tgcgctaccc acacctgaac gacatcgccg 4440 cagcgcagga cgaagcggac gcgacaaacc aaacacaggt cgtggatatg gggaatggca 4500 tcacgcgcga agtcttcccc aatccccgtc agtagatgcg cttttcaccc catcgagggg 4560 cgaaaagcac gtgcaggggt cccctccgct acgctccacc cctgtcacag gaagcaacgg 4620 aggagggaga gcatcccgaa aaaatcgaac cacgaattgc cgcctggaaa atctgaccgg 4680 gcggcttttt gccatattgc gcactactct gaccgccgac catgttcggc agcctacgac 4740 actctatcga tagtactgtt cttcatatcg atattctttc aacttctatc tatagttctt 4800 taacttctat cgtta 4815 //