ID DQ079876; SV 1; circular; genomic DNA; STD; PHG; 6051 BP. XX AC DQ079876; XX DT 25-JAN-2006 (Rel. 86, Created) DT 28-FEB-2006 (Rel. 87, Last updated, Version 2) XX DE Coliphage ID62, complete genome. XX KW . XX OS Escherichia phage ID62 OC Viruses; ssDNA viruses; Microviridae; Bullavirinae; Alpha3microvirus. XX RN [1] RP 1-6051 RX DOI; 10.1128/JB.188.3.1134-1142.2006. RX PUBMED; 16428417. RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT "Horizontal gene transfer and the evolution of microvirid coliphage RT genomes"; RL J. Bacteriol. 188(3):1134-1142(2006). XX RN [2] RP 1-6051 RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT ; RL Submitted (31-MAY-2005) to the INSDC. RL Biological Sciences, University of Idaho, PO Box 443051, Moscow, ID RL 83844-3051, USA XX DR MD5; a7234e19213918496e3246ac77155b54. XX FH Key Location/Qualifiers FH FT source 1..6051 FT /organism="Escherichia phage ID62" FT /mol_type="genomic DNA" FT /db_xref="taxon:338107" FT gene 760..2244 FT /gene="A" FT CDS 760..2244 FT /codon_start=1 FT /transl_table=11 FT /gene="A" FT /product="gpA" FT /note="Rf replication; viral strand synthesis" FT /db_xref="GOA:Q2LM62" FT /db_xref="InterPro:IPR008766" FT /db_xref="UniProtKB/TrEMBL:Q2LM62" FT /protein_id="AAZ49028.1" FT /translation="MATEIFSDVVKAVWSHATAKHAHLRMAVQVDNRSRLLSDLVYQLE FT KRLSEETHLDDETLAVYEFQTALLEDHMALVRKCAAQLDNSNTIDHRTPLDAECVFLFE FT MICPGVRYGKTLNSLWTKYVVQWPEKLIRQELDMVKPLSFKDEVAKYMEKMQEKTRKNR FT MTQKVINEMRIAHQKGWFFVFDTLTLADDRLQAFNENPNALRDYFRTVGRAVLRAEGRS FT VKDSYNDCYRYLCVPEFGGQHGRLHWHVVHMVRTLPLGSHDPNFGRKVRNYRQINSFRG FT MWPYGFTQPIAVRYQHDAYSRKGWLWPVDKLGKAMQSKPYQAVAWYVTKYVAKQSDQRQ FT KAITERQKKCKNPLMAICLKKEFRVRSSRKLGMELPSMAHLSNKVLLELSRISFDSSPL FT YQIVKENAKKQLTLNIGALPLHVILDVRPEVRSMLKNIRRLMKKTPEFNCQSSIASMTV FT TLKNGDISDEARRYIIDAGITPFDLRAKATQTFGGK" FT gene 1806..2159 FT /gene="B" FT CDS 1806..2159 FT /codon_start=1 FT /transl_table=11 FT /gene="B" FT /product="gpB" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LM61" FT /db_xref="InterPro:IPR003513" FT /db_xref="UniProtKB/TrEMBL:Q2LM61" FT /protein_id="AAZ49027.1" FT /translation="MQESTHGNLSEKGIQSSQQPEARNGAPFDGSPQQQGSSGTEPNQL FT RFQSSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKYVEKYPSFDEKDTRVQLSEFY FT RFNDGHLKKWGYF" FT gene 2159..2320 FT /gene="K" FT CDS 2159..2320 FT /codon_start=1 FT /transl_table=11 FT /gene="K" FT /product="gpK" FT /db_xref="UniProtKB/TrEMBL:Q2LM60" FT /protein_id="AAZ49026.1" FT /translation="MKHVDTLLMQELRLLICELKRLRLSAVSDPDFSQEKIHAELDSLL FT CKLSRYFD" FT gene 2271..2477 FT /gene="C" FT CDS 2271..2477 FT /codon_start=1 FT /transl_table=11 FT /gene="C" FT /product="gpC" FT /note="DNA maturation" FT /db_xref="GOA:Q2LM59" FT /db_xref="InterPro:IPR016407" FT /db_xref="UniProtKB/TrEMBL:Q2LM59" FT /protein_id="AAZ49025.1" FT /translation="MLSSTRYYASYRATLTKQLMFLTKADFTNDDEKWLNAFGNLLRQW FT FQIEDWKGNHKKLLDDLKKRNYI" FT gene 2504..2962 FT /gene="D" FT CDS 2504..2962 FT /codon_start=1 FT /transl_table=11 FT /gene="D" FT /product="gpD" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LM58" FT /db_xref="InterPro:IPR004196" FT /db_xref="UniProtKB/TrEMBL:Q2LM58" FT /protein_id="AAZ49024.1" FT /translation="MSNLVATDVNFATSVAALKMLQSSAVLDITEEDFDFLTGDKIWIA FT TDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFT FT ENIVNGVERPVKAAELFAYTLRVKAGLKETVLNAEENARQKLRASGVM" FT gene 2682..2912 FT /gene="E" FT CDS 2682..2912 FT /codon_start=1 FT /transl_table=11 FT /gene="E" FT /product="gpE" FT /note="cell lysis protein" FT /db_xref="GOA:Q2LM57" FT /db_xref="InterPro:IPR007605" FT /db_xref="UniProtKB/TrEMBL:Q2LM57" FT /protein_id="AAZ49023.1" FT /translation="MERWTLWDTLAFLLLLSLLLPSLLIMFIPSIFRQPASSWRALSLR FT KTLLMASSVRLKPLNSSRTPCVLKPDLKKRF" FT gene 2964..3038 FT /gene="J" FT CDS 2964..3038 FT /codon_start=1 FT /transl_table=11 FT /gene="J" FT /product="gpJ" FT /note="core protein; DNA condensation" FT /db_xref="GOA:Q2LM56" FT /db_xref="InterPro:IPR006815" FT /db_xref="UniProtKB/TrEMBL:Q2LM56" FT /protein_id="AAZ49022.1" FT /translation="MKKIRRSPSRKKGARLWYVGGSQF" FT gene 3073..4356 FT /gene="F" FT CDS 3073..4356 FT /codon_start=1 FT /transl_table=11 FT /gene="F" FT /product="gpF" FT /note="major coat protein" FT /db_xref="GOA:Q2LM55" FT /db_xref="InterPro:IPR003514" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q2LM55" FT /protein_id="AAZ49021.1" FT /translation="MSNVQTSAERIPHDLSHLVFEAGKIGRLKVVSWTPVVAGDSFELD FT MVGAIRLSPLRRGLAVDSRVDLFTFYVPHRHIYGEEWIQFMKDGVNAKPLAPVTCSRGW FT DSAQYLGTIPSSTLKVPKFLHQGYLNIYNNYFKAPWMDDLTYANPSNMEGEDVRFGVRA FT CNLKTIWTAPLPPGTETSHSMKTEANSIDIMGLQAAYAQLHTEQERDYFMTRYRDIVNE FT FGGSTSYDADNRPLLVMHSEFWASGYDVDGTDQSSLGQFSGRVQQTFKHSVPRFFCPEH FT GTMFTLALVRFPPTHEMEMHYLVGKEDLTYTDLACDPALMANLPPREVNMKQFFHSGDA FT NAKFKIAEGQWYRMQPDRVALPYNYLDGFPFYSAIPSSDIKQRVLVNTDNYDEVFQSMQ FT LAHWNMQTKFNCTIYRNMPTTRDSIMTS" FT gene 4393..4938 FT /gene="G" FT CDS 4393..4938 FT /codon_start=1 FT /transl_table=11 FT /gene="G" FT /product="gpG" FT /note="major spike protein" FT /db_xref="GOA:Q2LM54" FT /db_xref="InterPro:IPR003515" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q2LM54" FT /protein_id="AAZ49020.1" FT /translation="MFQVYVSKHVAPFTSKNRAFSISPAANPQVVNSGEIVAGRSTFRV FT ASSIGAASNGSGFAFVQMMDPNSPDSQQVFSVAASLSFSVDSNYIPCVVRFESTAAQPT FT GFNIATSDFIPVEASALSPRALSVRDCVTVDVKPRAEGNNVFVGVVFFSASANAGNVTG FT VVSMAQVDHEVTALQPLK" FT gene 5074..6051 FT /gene="H" FT CDS 5074..6051 FT /codon_start=1 FT /transl_table=11 FT /gene="H" FT /product="gpH" FT /note="minor spike protein" FT /db_xref="GOA:Q2LM53" FT /db_xref="InterPro:IPR006777" FT /db_xref="UniProtKB/TrEMBL:Q2LM53" FT /protein_id="AAZ49019.1" FT /translation="MIGAVVGGIASALASGAASKLFGGKPAAQAATESSGLSNGQGVIG FT MDNDAGIQSAIQGSNVPNGQIPAPTQTGGVMADAKNMIKNAGKDLLDGVMTAGSDRVKQ FT ALVDKLSGNNAKKQGQATRDYLAAAFPELNAWERAGAGASGAGLESSGQDQQKELMRMQ FT LDTQKDIAKMQMQNNLQIAGIQSATSRQNTKDSVYAQNEMLQYNQRESQARVESILANT FT DLTAKQATHEIMRMALTRAQETGQHLTNSQIMALEKKVYAEIGKIHQDTQNARYGSSQV FT TATAKDVSNMITDAASGFGDWASQQWNSFFKDGKSNGIPLNTRK" XX SQ Sequence 6051 BP; 1416 A; 1288 C; 1431 G; 1916 T; 0 other; ttgttgacat tccctaaacc cttatgagac tcttgcttca acgaaatgaa gttggagtct 60 tttttatgaa acctgctcac cgccttactc accctgttct tggttcatgg ttgtttaagt 120 gccccgtcta tgttcgttat gagtctgttc acaatggtcg ccttatcaag gttcgcgctg 180 ttcgtgattt gtctcctcgc cagcaactga ttgctaaccc taaaaattgt tttgacgttg 240 tcattgttga gattgacttc acttattgct ctgttaccta ttttgattat gaggctgagg 300 aatatgctga gtgtggccca gagactatgg atagcatcat tgcttatatt aacgctcctc 360 actcccttcg ctctgaggag gatttatccg ttgatgttga tgatatggaa tggctctatg 420 aaattgcgga gtaaatcatg gaaactgtta tcggaaaatt tattgctctg gctgttgttg 480 ctcttatgct gtatggaatt tcccgtttga ttcggaggtt cccgtgaaat attttagttt 540 ggttgatgaa cattatgctt attgccttga tacaaggatt ttgcatatca ctcgcagtcg 600 tgtttctgac cctcggtatg agcgtcgctt tcttactgat gaggagcatc ttgcactttt 660 ggattggttg aaaaatcgcc cagcttacat taattcttga cagaccttta aaataccctc 720 tatattgctc tcatagtttc actatgaggg ctttttcgca tggctactga aattttctct 780 gatgttgtaa aggctgtttg gtcgcatgct acggctaagc acgctcatct tcgtatggct 840 gttcaggttg ataatcgtag ccgtcttctt tctgacctcg tttatcagtt ggaaaaacgc 900 ctttctgaag agactcattt ggatgatgag actcttgccg tttatgaatt tcagactgcc 960 cttctggaag accatatggc actggttcgg aagtgtgctg ctcaacttga taatagtaac 1020 actatagacc accgtacccc tttggatgcc gaatgtgttt ttctgtttga aatgatttgt 1080 ccgggtgttc gctacggtaa aacgttgaat tctctttgga ctaagtatgt tgttcaatgg 1140 cctgagaagt taatccgtca ggagttggac atggtcaagc ctttatcttt taaagatgag 1200 gttgctaagt acatggagaa aatgcaggaa aaaacacgca aaaatcgcat gactcagaag 1260 gtgattaatg agatgcgtat tgctcaccaa aagggctggt tctttgtatt tgatacgttg 1320 actcttgctg atgaccgttt gcaggctttt aatgaaaacc ctaatgctct tcgtgattat 1380 tttaggactg ttggtcgagc tgttttgcgc gctgaaggtc gttcggttaa ggattcctac 1440 aacgactgct atcgctatct ttgtgtgccg gagtttggag gccagcacgg ccgtcttcat 1500 tggcacgttg tgcatatggt gcggactctt cctttgggaa gtcacgaccc taatttcggt 1560 cgcaaggtac gtaattatcg ccagattaac tcgttccgcg gtatgtggcc ttatggtttc 1620 acgcaaccga tagctgttcg ctatcaacat gatgcttatt ctcgtaaagg ttggctttgg 1680 cctgttgaca aattaggaaa agcaatgcag agtaagccgt atcaggcggt cgcatggtat 1740 gtgaccaagt atgtagccaa gcaatctgac caacgtcaga aagctattac tgagagacaa 1800 aaaaaatgca agaatccact catggcaatc tgtctgaaaa aggaattcag agttcgcagc 1860 agccggaagc tcggaatgga gctcccttcg atggctcacc tcagcaacaa ggttcttctg 1920 gaactgagcc gaatcagctt cgattccagt cctctgtatc agatagtgaa agagaacgcc 1980 aaaaagcaat tgaccttgaa catcggcgcg ctgcctttgc acgtcatttt ggatgtgcgc 2040 ccggaagtga gaagtatgtt gaaaaatatc cgtcgtttga tgaaaaagac acccgagttc 2100 aattgtcaga gttctatcgc ttcaatgacg gtcaccttaa aaaatgggga tatttctgat 2160 gaagcacgtc gatacattat tgatgcagga attacgcctt ttgatttgcg agctaaagcg 2220 actcagactt tcggcggtaa gtgacccgga tttttctcag gagaagatac atgctgagct 2280 cgactcgtta ttatgcaagt tatcgcgcta ctttgactaa gcagttgatg tttttgacta 2340 aagctgactt taccaatgat gatgaaaaat ggcttaatgc ctttggtaat ttgcttcggc 2400 agtggtttca gattgaagat tggaaaggca atcataaaaa attgcttgac gatttgaaaa 2460 aacgtaatta catttgaggt gttttcactg aaaggagttt gttatgtcta atcttgttgc 2520 tactgatgtt aactttgcta cctctgttgc cgctctgaag atgcttcagt cttctgctgt 2580 tctggatatt accgaggagg attttgattt tctgactggt gataaaattt ggattgctac 2640 cgaccgcaac cgtgcgcgtc gttgtgttga ggcttgtgtt tatggaacgt tggactttgt 2700 gggataccct cgctttcctg ctcctgttga gtttattgct gccgtcattg cttattatgt 2760 tcatcccgtc aatattcaga cagcctgcct catcatggag ggcgctgagt ttacggaaaa 2820 cattgttaat ggcgtcgagc gtccggttaa agccgctgaa ctcttcgcgt acaccttgcg 2880 tgttaaagcc ggacttaaag aaacggtttt gaatgctgaa gagaatgctc gccagaaact 2940 tcgtgcaagt ggagtaatgt aatatgaaga aaattcgtcg ttctccttct cgtaagaaag 3000 gtgctcgcct ctggtatgta ggcggttctc agttttaatt gatggggctt cggcccctat 3060 aaggatttat aaatgtctaa tgtacagact tccgctgaac gtattcccca tgacctgtct 3120 catctggttt ttgaagcagg taaaattggt cgcttaaaag ttgtttcttg gactcctgtt 3180 gttgcaggtg attcttttga gcttgatatg gttggcgcta ttcgcctttc tccgcttcgt 3240 cgcggtcttg ctgttgactc tcgcgttgac ctgttcacgt tctatgtccc tcaccgtcat 3300 atttatggtg aagagtggat tcagtttatg aaagatggcg ttaatgctaa acctcttgca 3360 cctgtgactt gttcgcgtgg ttgggatagt gctcagtatt taggtacaat cccttccagt 3420 acccttaagg tgcctaaatt tcttcatcaa ggttatttga atatttataa taactacttc 3480 aaagctccgt ggatggatga cctgacttac gctaacccgt ccaatatgga aggtgaagac 3540 gttcgttttg gtgttcgtgc ttgtaacctg aaaactattt ggactgcccc tttgcctccg 3600 ggtactgaaa cttctcattc tatgaagact gaggctaact ctatcgatat tatgggttta 3660 caagccgctt atgctcaatt gcatactgag caggagcgtg attacttcat gactcgttat 3720 cgtgatattg ttaatgaatt tggtggtagt acttcttatg atgcggataa tcgtcctttg 3780 cttgttatgc attctgagtt ttgggcttca ggctatgacg tcgacggcac cgaccaaagt 3840 tctctcggtc agttctccgg acgtgtacag cagaccttta agcattcagt accgcgattc 3900 ttctgtcctg aacacggcac tatgttcacg cttgcactgg tccgcttccc gccaactcac 3960 gaaatggaga tgcattactt agttggtaaa gaggatttaa cttatactga tttggcttgt 4020 gatccagctc tgatggctaa ccttcctcct cgtgaggtta atatgaagca gttcttccac 4080 tctggcgatg ctaatgccaa gtttaagatt gctgaaggtc aatggtatcg tatgcagcct 4140 gaccgtgttg cgttgccgta taactatctt gatggcttcc cgttctatag cgcgattccg 4200 tctagtgata ttaagcagcg tgttttggtc aatactgaca actacgatga ggttttccag 4260 tctatgcagc ttgctcattg gaatatgcag actaagttca actgcacgat ttatcgtaat 4320 atgccgacca ctcgcgattc cattatgact tcttgattat gtggggcttc ggcccccttt 4380 aaggatttga ttatgtttca agtttatgta tctaagcatg ttgccccgtt cacttctaag 4440 aaccgtgcct tttctatttc ccctgccgct aacccgcagg ttgttaactc tggtgagatt 4500 gttgcaggtc gctccacttt ccgcgttgcg tcttccattg gcgctgcttc taatggtagt 4560 ggttttgcgt ttgttcagat gatggacccc aattctcctg attctcagca ggttttctct 4620 gttgctgctt cgctgtcctt tagtgttgac tcgaattaca ttccttgtgt tgttcgtttt 4680 gagagcactg ctgctcagcc tactggtttt aatattgcaa cctctgattt cattccggtt 4740 gaggcttctg ctctttctcc tcgtgcgctt agtgttcgcg attgtgtcac tgttgatgtt 4800 aagcctcgtg ctgaaggcaa taatgtcttt gttggtgtgg ttttcttctc tgcctccgct 4860 aatgctggta atgttactgg tgttgtttcg atggctcagg ttgaccacga agttacagct 4920 ttgcagccgc ttaaataaaa ggccgccgca ctcccggtta gatgcctgcc cagtgtaggg 4980 cggaccgagc cttacggaga tacccgataa actaggaacg cggaaggcgt aagccgcctt 5040 ccctcctgct aagcccaaag gagactttca gctatgatag gtgccgttgt aggtggtatt 5100 gcttcagcct tagccagtgg agccgcttct aagctgtttg gtggcaaacc tgccgctcaa 5160 gccgctactg agtcctctgg cctttccaat ggtcaaggtg ttattggtat ggataatgat 5220 gccggtatcc agtcagctat tcagggttct aatgttccta atggtcagat tcccgctccc 5280 actcagactg gaggtgttat ggctgatgcc aagaatatga ttaagaatgc cggtaaggat 5340 ttgcttgatg gtgtcatgac tgctggtagt gaccgagtca agcaagcgtt agttgataaa 5400 ttgagtggta ataatgcaaa gaaacaagga caagcaaccc gtgattactt ggctgcggcc 5460 ttccctgagc tcaatgcatg ggaacgtgct ggagctggtg cttccggcgc cggactggaa 5520 tcttccggtc aggaccaaca gaaggagttg atgcgtatgc agctggatac tcagaaggat 5580 attgctaaga tgcagatgca gaataatttg cagattgccg gtattcagtc cgctacttct 5640 cgtcagaaca caaaggattc tgtttatgct cagaatgaga tgcttcagta caatcaacgt 5700 gagtcacagg cacgcgtcga gtccatcctc gccaatactg accttacggc taaacaagct 5760 acccatgaaa ttatgagaat ggctcttacc cgtgctcagg agactggtca gcatttgact 5820 aatagtcaga ttatggcttt ggagaagaaa gtttatgcag aaatcggaaa aattcatcaa 5880 gatactcaaa acgctcgcta tggtagctct caagttactg ctacggcgaa agacgtttcg 5940 aacatgatta ctgatgccgc ctcaggtttt ggtgattggg cctctcaaca gtggaattcc 6000 ttctttaagg atggcaagtc caacggtatt cctcttaaca ctagaaaata a 6051 //