ID DQ079874; SV 1; circular; genomic DNA; STD; PHG; 6068 BP. XX AC DQ079874; XX DT 25-JAN-2006 (Rel. 86, Created) DT 28-FEB-2006 (Rel. 87, Last updated, Version 2) XX DE Coliphage WA45, complete genome. XX KW . XX OS Escherichia phage WA45 OC Viruses; ssDNA viruses; Microviridae; Bullavirinae; Alpha3microvirus. XX RN [1] RP 1-6068 RX DOI; 10.1128/JB.188.3.1134-1142.2006. RX PUBMED; 16428417. RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT "Horizontal gene transfer and the evolution of microvirid coliphage RT genomes"; RL J. Bacteriol. 188(3):1134-1142(2006). XX RN [2] RP 1-6068 RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT ; RL Submitted (31-MAY-2005) to the INSDC. RL Biological Sciences, University of Idaho, PO Box 443051, Moscow, ID RL 83844-3051, USA XX DR MD5; 271c9004ffcc4af4e22ccdcba9001535. XX FH Key Location/Qualifiers FH FT source 1..6068 FT /organism="Escherichia phage WA45" FT /mol_type="genomic DNA" FT /db_xref="taxon:338105" FT gene 759..2243 FT /gene="A" FT CDS 759..2243 FT /codon_start=1 FT /transl_table=11 FT /gene="A" FT /product="gpA" FT /note="Rf replication; viral strand synthesis" FT /db_xref="GOA:Q2LM82" FT /db_xref="InterPro:IPR008766" FT /db_xref="UniProtKB/TrEMBL:Q2LM82" FT /protein_id="AAZ48999.1" FT /translation="MASEIFSDVVKSVWSHATAKHAHLRMAVQVDNRSRLLSDLVYQLE FT KRLSEETHLDDETYALYESQTGLLEDHMALVRKCAAQLDNSNTIDHRTPLDAECVFLFE FT MICPGVRYGKTLNSLWTKYVAQWPEKLIRQELDMVKPLSFKDEVAKYMEKMQEKTRKNR FT MTQKVINEMRIAHQKGWFFVFDTLTLADDRLQAFNENPNALRDYFRTVGRAVLRAEGRS FT VKDSYNDCYRYLCVPEFGGQHGRLHWHVVHMVRTLPLGSYDPNFGRKVRNYRQINSFRG FT MWPYGFTQPIAVRYQHDAYSRKGWLWPVDKSGKAMQSKPYQAVAWYVTKYVAKQSDQRQ FT KAITERQKKCKNPLMAICLKKEFRVRSSRKLGMELPSMAHLSNKVLLELSRISFDSSPL FT YQIVKENAKKQLTLNIGALPLHVILDVRPEVRSMLKNIRRLMKKTPEFNWQSSIASMTV FT TLKNGDISDEARQYIIDAGITPFDLRAKATQTFGGK" FT gene 1805..2158 FT /gene="B" FT CDS 1805..2158 FT /codon_start=1 FT /transl_table=11 FT /gene="B" FT /product="gpB" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LM81" FT /db_xref="InterPro:IPR003513" FT /db_xref="UniProtKB/TrEMBL:Q2LM81" FT /protein_id="AAZ49000.1" FT /translation="MQESTYGNLSEKGIQSSQQPETRNGVTVDGASQQQSASGAEPNQL FT RFQPSVSDSERERQKAIDLEHRRAAFARHFGCAPGSEKYVEKYPSFDEKDTRVQLAEFY FT RFNDGHLKKWGYF" FT gene 2158..2319 FT /gene="K" FT CDS 2158..2319 FT /codon_start=1 FT /transl_table=11 FT /gene="K" FT /product="gpK" FT /db_xref="UniProtKB/TrEMBL:Q2LM80" FT /protein_id="AAZ49001.1" FT /translation="MKHVNTLLMQELRLLICELKRLKLSAVSDPDFSQEKIHAELDSLL FT RKLSRYFD" FT gene 2270..2476 FT /gene="C" FT CDS 2270..2476 FT /codon_start=1 FT /transl_table=11 FT /gene="C" FT /product="gpC" FT /note="DNA maturation" FT /db_xref="GOA:Q2LM79" FT /db_xref="InterPro:IPR016407" FT /db_xref="UniProtKB/TrEMBL:Q2LM79" FT /protein_id="AAZ49002.1" FT /translation="MLSSTRYYASYRATLTKQLMFLTKADFTNDDEKWLNAFGNLLRQW FT FQIEDWKGNHKKLLDDLKKRDYI" FT gene 2520..2978 FT /gene="D" FT CDS 2520..2978 FT /codon_start=1 FT /transl_table=11 FT /gene="D" FT /product="gpD" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LM78" FT /db_xref="InterPro:IPR004196" FT /db_xref="UniProtKB/TrEMBL:Q2LM78" FT /protein_id="AAZ49003.1" FT /translation="MSNLVATDVNFATSVAALKMLQASAVLDITEEDFDFLTGDKIWIA FT TDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFT FT ENIVNGVERPVKAAELFAYTLRVKAGFKETVLSAEENARQKLRASGVM" FT gene 2698..2928 FT /gene="E" FT CDS 2698..2928 FT /codon_start=1 FT /transl_table=11 FT /gene="E" FT /product="gpE" FT /note="cell lysis protein" FT /db_xref="GOA:Q2LM77" FT /db_xref="InterPro:IPR007605" FT /db_xref="UniProtKB/TrEMBL:Q2LM77" FT /protein_id="AAZ49004.1" FT /translation="MERWTLWDTLAFLLLLSLLLPSLLIMFIPSTFRRPASSWKALSLR FT KTLLMASSVRLKPLSSSRTPCVLRPDSKKRF" FT gene 2980..3054 FT /gene="J" FT CDS 2980..3054 FT /codon_start=1 FT /transl_table=11 FT /gene="J" FT /product="gpJ" FT /note="core protein; DNA condensation" FT /db_xref="GOA:Q2LM76" FT /db_xref="InterPro:IPR006815" FT /db_xref="UniProtKB/TrEMBL:Q2LM76" FT /protein_id="AAZ49005.1" FT /translation="MKKARRSPSRKKGARLWYVGGSQF" FT gene 3089..4372 FT /gene="F" FT CDS 3089..4372 FT /codon_start=1 FT /transl_table=11 FT /gene="F" FT /product="gpF" FT /note="major coat protein" FT /db_xref="GOA:Q2LM75" FT /db_xref="InterPro:IPR003514" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q2LM75" FT /protein_id="AAZ49006.1" FT /translation="MSNVQTSAERIPHDLSHLVFDAGKIGRLKVVSWTPVVAGDSFELD FT MIGAIRLSPLRRGLAVDSRVDLFTFYVPHRHVYGEQWIDFMKQGVDAAPLAPVQCSRGW FT DSAQYLATIPSSNLKVPKFLHQGYLNIYNNYFKAPWMDDLTYANPSNMEGEDVRFGVRA FT CNLKTIWTAPLPPDTETSHSMETETNSIDIMGLQAAYAQLHTEQERDYFMTRYRDIVNE FT FGGSTSYDADNRPLLVMHSEFWASGYDVDGTDQSSLGQFSGRVQQTFKHSVPRFFCPEH FT GTMFTLALVRFPPTHEMEMHYLVGKEDLTYTDLACDPALMANLPPREVTMQQFFHSGNA FT NAKFKIAEGQWYRMQPDRVALPYNYLDGFPFYSAIPSDDIKQRVLVNTDNYDEVFQSMQ FT LAHWNMQTKFNCTIYRNMPTTRDSIMTS" FT gene 4410..4955 FT /gene="G" FT CDS 4410..4955 FT /codon_start=1 FT /transl_table=11 FT /gene="G" FT /product="gpG" FT /note="major spike protein" FT /db_xref="GOA:Q2LM74" FT /db_xref="InterPro:IPR003515" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q2LM74" FT /protein_id="AAZ49007.1" FT /translation="MFQVYVSKHVAPFTSVNRAFSIAPAANPQVVNSGEIVAGRSTFRI FT ASSIASASNGSGFAFVQMMDPNSPDSQQVFSVAASLSFSVDSNYIPCVVRFESTVAQPT FT SFDIATADFIPVEASALSPRALSVRDCVTVDVKPRTEGNNVFVGVVFFSAAANAGNVTG FT VVSMAQVDHEVTALQPLK" FT gene 5091..6068 FT /gene="H" FT CDS 5091..6068 FT /codon_start=1 FT /transl_table=11 FT /gene="H" FT /product="gpH" FT /note="minor spike protein" FT /db_xref="GOA:Q2LM73" FT /db_xref="InterPro:IPR006777" FT /db_xref="UniProtKB/TrEMBL:Q2LM73" FT /protein_id="AAZ49008.1" FT /translation="MLGAVVGGIASALAGGAASKLFGGKPAAQAATESSGLSNGQGVIG FT MDQDAGIQSAIQGSNVPNGQIPAPTQTGGVMSDAKNMIKNAGKDLLDGVMTAGSDRIKQ FT ALVDKLSGNDAKKQGQATRDYLAAAFPELNAWERAGAGASGAGLESSGQNQQKELMRMQ FT LDTQKDIAKMQMHNNLQIAGIQSATSRENTKDSVYAQNEMLKFNQQESQARVESILANT FT DLTAKQAAHEIMRMALTRAQETGQHLTNSQIMALEKKVYAEIGKIHQDTQNARYGSSQV FT TAAAKDVTNMITDAASGAADWVSQQWNSFFKDGKSNGIPLNTRK" XX SQ Sequence 6068 BP; 1418 A; 1294 C; 1433 G; 1923 T; 0 other; ttgttgacat tccctaaacc cttatgagac tcttgcttca acgaatgaag taggagtctt 60 tattatgaaa cccgcttacc gcttgactca tccgattctc ggctcttggt tgtttaagtg 120 ccccgtttat atccgttatg agtaccttca tcacggtcgt cttatcaagg ttcgcgctgt 180 tcgtgatttg tccccgcgtc agcagcttat tgctaaccct aaaaactgct ttgacgttgt 240 tattgctgag attgacgtta cttattgttc tgtcacttat tttgattatg aggctgagga 300 atatgccgag tgtgattcag aaactatgga taatatcctt gcttatatta actctcctca 360 ttcccttcgc tctgaggagg attcatccgt tgatgttgac gatatggcgt ggctttatga 420 aattgcggag taagttatgg aaactgttgt cggaaaattt attgctttgg ctgttgttgc 480 tcttatgctg tatggaattg cccgcttaat tcggaggttc ccgtgaagta ttttagtctt 540 gtggatgaac attatgctta ttgccctgat acgaggattt tgcatattac tcgtagccgt 600 gtttctgacc ctcgttatga gcgtcgcttt cttactgatg aggaacattt tgcacttttg 660 gattggttga aaaatcgccc aacttatatt aattcttgac aggcctttaa aataccctct 720 atattgccct cataggttca ctacgagggc ttttttgcat ggcttctgaa atcttctctg 780 atgttgttaa gtctgtttgg tcgcacgcta cggctaagca cgctcatctt cgtatggctg 840 ttcaggttga taatcgtagt cgccttcttt ctgatttggt ttaccagttg gaaaagcgcc 900 tttccgaaga gactcatttg gatgatgaga cttatgccct ttatgaatct cagactggcc 960 ttttggaaga tcatatggca ctggttcgga agtgtgcagc ccaacttgat aatagtaaca 1020 ctatagacca ccgtacccct ttggatgccg aatgtgtttt cctgtttgaa atgatttgcc 1080 caggcgttcg ctacggtaaa acgttgaatt ctctttggac taagtatgtt gctcaatggc 1140 ctgagaagtt aattcgtcaa gagttagaca tggttaagcc tttatccttt aaggatgagg 1200 ttgctaagta catggagaag atgcaggaaa aaacacgcaa aaatcgcatg actcaaaaag 1260 taattaatga gatgcgtatt gctcaccaaa agggctggtt tttcgtattt gatacgttga 1320 cacttgctga tgatcgtttg caggctttta atgaaaaccc caatgctctt cgtgattatt 1380 tcaggactgt tggtcgagct gttctgcgcg ctgaaggtcg ttcggttaag gattcctaca 1440 acgattgcta tcgctatctt tgtgtgccgg agtttggagg tcagcacggt cgtcttcatt 1500 ggcatgttgt gcatatggtg cggactcttc ctttgggaag ttacgaccct aatttcggtc 1560 gcaaggtacg taattatcgc cagattaact cgttccgtgg catgtggcct tatggcttca 1620 cgcaaccgat agctgtacgc tatcaacatg atgcttattc tcgcaaaggt tggttgtggc 1680 ctgttgacaa atcaggtaaa gcaatgcaga gtaagcccta tcaggcggtc gcatggtatg 1740 tgaccaaata tgtagctaag caatctgacc agcgtcagaa agctattact gagagacaaa 1800 aaaaatgcaa gaatccactt atggcaatct gtctgaaaaa ggaattcaga gttcgcagca 1860 gccggaaact cggaatggag ttaccgtcga tggcgcatct cagcaacaaa gtgcttctgg 1920 agctgagccg aatcagcttc gattccagcc ctctgtatca gatagtgaaa gagaacgcca 1980 aaaagcaatt gaccttgaac atcggcgcgc tgcctttgca cgtcattttg gatgtgcgcc 2040 cggaagtgag aagtatgttg aaaaatatcc gtcgtttgat gaaaaagaca cccgagttca 2100 attggcagag ttctatcgct tcaatgacgg tcaccttaaa aaatggggat atttctgatg 2160 aagcacgtca atacattatt gatgcaggaa ttacgccttt tgatttgcga gctaaagcga 2220 ctcaaacttt cggcggtaag tgacccggat ttttctcagg agaagattca tgctgagctc 2280 gactcgttac tacgcaagtt atcgcgctac tttgactaag cagctgatgt ttttgactaa 2340 agctgacttt accaatgatg atgaaaaatg gcttaatgcc tttggtaatt tgctccgtca 2400 gtggtttcag attgaggatt ggaaaggcaa tcataaaaaa ttgcttgacg atttaaaaaa 2460 acgtgattac atttgagctg tttcaaggtt tcttacccat taaatgttag gagaatgtta 2520 tgtctaatct tgttgctact gatgttaact ttgctacttc tgttgctgct ctgaagatgc 2580 ttcaggcttc cgctgttctg gatattaccg aggaggattt tgatttcctg actggtgata 2640 aaatttggat tgctactgac cgcaaccgtg cgcgtcgctg tgttgaggct tgtgtttatg 2700 gaacgctgga ctttgtggga taccctcgct ttcctgctcc tgttgagttt attgctgccg 2760 tcattgctta ttatgttcat cccgtcaaca ttcagacggc ctgcctcatc atggaaggcg 2820 ctgagtttac ggaaaacatt gttaatggcg tcgagcgtcc ggttaaagcc gctgagctct 2880 tcgcgtacac cttgcgtgtt aaggccggat tcaaagaaac ggttctgagc gctgaagaga 2940 atgctcgtca gaaacttcgt gcaagtggag taatgtaata tgaagaaagc tcgtcgttcc 3000 ccttctcgta agaaaggcgc tcgtctctgg tatgtaggcg gttctcaatt ttaattaacg 3060 gggcttcggc ccctataagg attcttaaat gtcaaacgtg caaacttccg ctgaacgtat 3120 tcctcacgac ctttctcatc tggtttttga tgcaggcaaa attggtcgtt taaaggttgt 3180 ttcttggact cctgttgttg caggtgattc ttttgagctt gatatgattg gcgctattcg 3240 cctttccccg cttcgtcgtg gccttgctgt tgactctcgt gttgacctgt tcacgtttta 3300 tgtccctcat cgtcatgtat atggtgagca gtggattgat tttatgaagc aaggtgttga 3360 tgctgctcct ttggcccctg ttcagtgctc tcgcggttgg gatagtgctc agtatcttgc 3420 tactattccg tctagtaact taaaggttcc taagtttctt catcaaggtt acctgaacat 3480 ttacaataat tactttaaag ctccgtggat ggatgacctg acttatgcca acccgtctaa 3540 tatggagggt gaagatgttc gttttggtgt tcgtgcatgt aacttgaaaa ctatttggac 3600 tgctccgctt cctccggata ctgaaacctc tcattctatg gagactgaaa ccaactccat 3660 tgacattatg ggtttgcagg ccgcttatgc tcaattacat actgagcagg agcgtgatta 3720 cttcatgact cgttatcgtg atattgttaa cgaatttgga ggtagtactt cttatgatgc 3780 ggataatcgt cctttgcttg ttatgcattc tgagttctgg gcctcaggct atgatgttga 3840 cggcaccgac caaagctctc tcggtcagtt ctccggtcgt gtccagcaaa cgtttaagca 3900 ttcagtaccg cgattcttct gccctgagca tggcactatg ttcacactcg cattggtccg 3960 cttcccgccc actcacgaaa tggagatgca ttacttagtt ggcaaggaag atttgactta 4020 tactgatttg gcttgtgacc cagctctgat ggctaacctt ccccctcgtg aggttactat 4080 gcagcagttc ttccactctg gtaatgctaa tgccaagttt aagattgctg agggtcagtg 4140 gtatcgtatg cagcctgacc gtgttgcttt gccttataac tatcttgatg gcttcccgtt 4200 ctatagcgcg attccgtctg atgatattaa gcagcgcgtt ctggttaata ctgataacta 4260 cgatgaggtt ttccagtcta tgcagcttgc tcactggaat atgcagacta agtttaattg 4320 caccatttat cgtaatatgc cgaccactcg cgactctatt atgacctctt gattatgtgg 4380 ggcttcggcc ccctttaagg atattgatta tgtttcaagt ttatgtatct aaacatgttg 4440 ctccgttcac ctctgtgaat cgtgcctttt ctattgcccc tgccgccaat ccgcaggttg 4500 ttaactctgg tgagattgtt gcaggtcgtt ctacttttcg cattgcttct tctattgctt 4560 ctgcttccaa tggtagtggt tttgcttttg ttcagatgat ggatccgaat tctcctgatt 4620 ctcagcaggt tttctctgtt gctgcttcgt tgtcctttag tgttgattcg aattatattc 4680 cttgtgttgt tcgttttgag agcactgttg ctcagcctac cagctttgat attgcaaccg 4740 ctgattttat tccggttgag gcttctgccc tttctcctcg tgcgcttagc gttcgcgatt 4800 gtgttaccgt tgatgttaag cctcgtactg aaggcaataa tgtttttgtt ggtgtggttt 4860 tcttctctgc tgccgctaat gctggtaatg tcactggtgt tgtttcgatg gctcaggttg 4920 accacgaagt tacagctttg cagccgctta aataaaaggc tgccgcactc ccggttagat 4980 gcctgcccag tgtagggcat gccgagccgt acagagatac ccgataaact aggaacgtgg 5040 aaggcgcaag ccgccttccc tcctgctaag ccccaaaagg agttacagcg atgttaggtg 5100 ccgttgtagg tggtattgct tcagccttag ctggtggagc cgcttctaag ctgtttggtg 5160 gtaaacctgc cgctcaagcc gctaccgagt cctctggcct ttctaatggt caaggcgtta 5220 ttggtatgga tcaagatgct ggtattcagt cagctattca gggctctaat gttcccaatg 5280 gtcagattcc tgcccccacg cagactggtg gcgttatgtc tgatgctaaa aatatgatta 5340 agaatgctgg taaagatttg cttgatggcg ttatgaccgc tggaagtgat cgcattaagc 5400 aggcattggt tgataagttg agtggtaacg atgcaaagaa acaaggacaa gcaacccgtg 5460 attacttggc tgcggccttc cctgagctca atgcatggga acgtgctgga gctggtgctt 5520 ccggtgccgg attggagtct tccggccaga atcagcaaaa ggagttgatg cgtatgcagc 5580 tggatactca gaaggatatt gctaagatgc aaatgcataa taatttgcag attgctggta 5640 ttcagtccgc tacttctcgc gagaatacga aggattcagt ttatgctcag aatgagatgc 5700 ttaaatttaa tcaacaggag tcacaggcac gcgttgagtc tatcctcgcc aacactgacc 5760 ttacggctaa acaggctgcc catgaaatta tgagaatggc ccttactcgt gctcaggaga 5820 ctggtcagca tttaactaat agtcagatta tggcattgga gaaaaaagtt tatgcagaaa 5880 tcggaaaaat tcatcaagat actcaaaacg ctcgttatgg tagctctcaa gttactgctg 5940 cggcgaaaga tgttacgaat atgattaccg atgccgcttc tggtgctgcc gattgggtct 6000 ctcaacagtg gaattctttc tttaaagatg gcaagtctaa tggtattccc ctcaatacca 6060 gaaaataa 6068 //