ID DQ079870; SV 1; circular; genomic DNA; STD; PHG; 6068 BP. XX AC DQ079870; XX DT 25-JAN-2006 (Rel. 86, Created) DT 28-FEB-2006 (Rel. 87, Last updated, Version 2) XX DE Coliphage ID21, complete genome. XX KW . XX OS Escherichia phage ID21 OC Viruses; ssDNA viruses; Microviridae; Bullavirinae; Alpha3microvirus. XX RN [1] RP 1-6068 RX DOI; 10.1128/JB.188.3.1134-1142.2006. RX PUBMED; 16428417. RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT "Horizontal gene transfer and the evolution of microvirid coliphage RT genomes"; RL J. Bacteriol. 188(3):1134-1142(2006). XX RN [2] RP 1-6068 RA Rokyta D.R., Burch C.L., Caudle S.B., Wichman H.A.; RT ; RL Submitted (31-MAY-2005) to the INSDC. RL Biological Sciences, University of Idaho, PO Box 443051, Moscow, ID RL 83844-3051, USA XX DR MD5; f3570720c35b60a392f20cc12879aa3c. XX FH Key Location/Qualifiers FH FT source 1..6068 FT /organism="Escherichia phage ID21" FT /mol_type="genomic DNA" FT /db_xref="taxon:338101" FT gene 761..2245 FT /gene="A" FT CDS 761..2245 FT /codon_start=1 FT /transl_table=11 FT /gene="A" FT /product="gpA" FT /note="Rf replication; viral strand synthesis" FT /db_xref="GOA:Q2LMC2" FT /db_xref="InterPro:IPR008766" FT /db_xref="UniProtKB/TrEMBL:Q2LMC2" FT /protein_id="AAZ48959.1" FT /translation="MATEIFSDVVKSVWSHATAKHSHLRMAVQVDNRSRLLSDLVYQLE FT KRLSEETHLDDETYALYESQTGLLEDHMALVRKCAAQLDNSNTIDHRTPLDSECVFLFE FT MICPGVRYGKTLNSLWTKYVAQWPEKLIRQELDMVKPLSFKDEVAKYMEKMQEKTRKNR FT MTQKVINEMRIAHQKGWFFVFDTLTLADDRLQAFNENPNALRDYFRTVGRAVLRAEGRS FT VKDSYNDCYRYLCVPEFGGQHGRLHWHVVHMVRTLPLGSHDPNFGRKVRNYRQINSFRG FT MWPYGFTQPIAVRYQHDAYSRKGWLWHVDKSGKAMQSKPYQAVAWYVTKYVAKQSDQRQ FT KAITERQKKCKNPLMAICLKKEFRVRSSRKLGMELPSMAHLSNKVLLELSRISFDSSPL FT YQIVKENAKKQLTLNIGALPLHVILDVRPEVRSMLKNIRRLMKKTPEFNWQSSIASMTV FT TLKNGDISNEARQYIIDAGITPSDLRAKATQTFGGK" FT gene 1807..2160 FT /gene="B" FT CDS 1807..2160 FT /codon_start=1 FT /transl_table=11 FT /gene="B" FT /product="gpB" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LMC1" FT /db_xref="InterPro:IPR003513" FT /db_xref="UniProtKB/TrEMBL:Q2LMC1" FT /protein_id="AAZ48960.1" FT /translation="MQESTYGNMSEKGIQSSQQPEARNGVAVDGASQQQGTSGTESNQL FT RFQPSVSDSERERQKAIDLEHRRAAFTRHFGCAPGSEKYVEKYPSFDEKDTRVQLAEFY FT RFNDGHLKKWGYF" FT gene 2160..2348 FT /gene="K" FT CDS 2160..2348 FT /codon_start=1 FT /transl_table=11 FT /gene="K" FT /product="gpK" FT /db_xref="UniProtKB/TrEMBL:Q2LMC0" FT /protein_id="AAZ48965.1" FT /translation="MKHVNTLLMQELRLLICELKRLKLSAVSDPDFSQEKIHAELNSLL FT CKLSRYFDEAADVSYKG" FT gene 2272..2478 FT /gene="C" FT CDS 2272..2478 FT /codon_start=1 FT /transl_table=11 FT /gene="C" FT /product="gpC" FT /note="DNA maturation" FT /db_xref="GOA:Q2LMB9" FT /db_xref="InterPro:IPR016407" FT /db_xref="UniProtKB/TrEMBL:Q2LMB9" FT /protein_id="AAZ48961.1" FT /translation="MLSSTRYYASYRATLTKQLMFLTKADFTNDDEKWLNAFGNLLRQW FT FEIEQWKGNHKKLLDDLKKRNYI" FT gene 2521..2979 FT /gene="D" FT CDS 2521..2979 FT /codon_start=1 FT /transl_table=11 FT /gene="D" FT /product="gpD" FT /note="capsid morphogenesis" FT /db_xref="GOA:Q2LMB8" FT /db_xref="InterPro:IPR004196" FT /db_xref="UniProtKB/TrEMBL:Q2LMB8" FT /protein_id="AAZ48962.1" FT /translation="MSNLVATDVNFATSVAALKMLQASAVLDITEEDFDFLTGDKIWIA FT TDRNRARRCVEACVYGTLDFVGYPRFPAPVEFIAAVIAYYVHPVNIQTACLIMEGAEFT FT ENIVNGVERPVKAAELFAYTLRVKAGFKETVLSAEDNARQKLRASGVM" FT gene 2699..2929 FT /gene="E" FT CDS 2699..2929 FT /codon_start=1 FT /transl_table=11 FT /gene="E" FT /product="gpE" FT /note="cell lysis protein" FT /db_xref="GOA:Q2LMB7" FT /db_xref="InterPro:IPR007605" FT /db_xref="UniProtKB/TrEMBL:Q2LMB7" FT /protein_id="AAZ48963.1" FT /translation="MGHWTLSGILAFLLLLSLLLPSLLIMFIPLTFRRPASSWKARSLQ FT KILLMASSVRLKPLSSSRIPCVLRPDSKRRF" FT gene 2981..3055 FT /gene="J" FT CDS 2981..3055 FT /codon_start=1 FT /transl_table=11 FT /gene="J" FT /product="gpJ" FT /note="core protein; DNA condensation" FT /db_xref="GOA:Q2LMB6" FT /db_xref="InterPro:IPR006815" FT /db_xref="UniProtKB/TrEMBL:Q2LMB6" FT /protein_id="AAZ48964.1" FT /translation="MKKARRSPSRKKGARLWYVGGSQF" FT gene 3090..4373 FT /gene="F" FT CDS 3090..4373 FT /codon_start=1 FT /transl_table=11 FT /gene="F" FT /product="gpF" FT /note="major coat protein" FT /db_xref="GOA:Q2LMB5" FT /db_xref="InterPro:IPR003514" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q2LMB5" FT /protein_id="AAZ48966.1" FT /translation="MSNVQTSAERIPHDLSHLVFDAGKIGRLKVVSWTPVVAGDSFELD FT MIGAIRLSPLRRGLAVDSRVDLFTFYVPHRHVYGEQWIEFMKQGVDAAPLAPVQCSRGW FT DSAQYLATIPSSNLKVPKFLHQGYLNIYNNYFKAPWMDDLTYANPSNMEGEDVRFGVRA FT CNLKTIWTAPLPPDTETSHSMETETNSIDIMGLQAAYAQLHTEQERDYFMTRYRDIVNE FT FGGSTSYDADNRPLLVMHSEFWASGYDVDGTDQSSLGQFSGRVQQTFKHSVPRFFCPEH FT GTMFTLALVRFPPTHEMEMHYLVGKEDLTYTDLACDPALMANLPPREVNMSQFFHSGST FT SAKFKIAEGQWYRMQPDRVALPYNYLDGFPFYSAIPSDDIKQRVLVNTDNYDEVFQSMQ FT LAHWNMQTKFNCTIYRNMPTTRDSIMTS" FT gene 4410..4955 FT /gene="G" FT CDS 4410..4955 FT /codon_start=1 FT /transl_table=11 FT /gene="G" FT /product="gpG" FT /note="major spike protein" FT /db_xref="GOA:Q2LMB4" FT /db_xref="InterPro:IPR003515" FT /db_xref="InterPro:IPR016184" FT /db_xref="UniProtKB/TrEMBL:Q2LMB4" FT /protein_id="AAZ48967.1" FT /translation="MFQVYVAKHVAPFTSMNRAFSISPAADPQVVNSGEIVAGRSTFRI FT ASSIDSASNGNGFAFVQMMDPNSPDSQQVFSVAASLSFSVDSNYVPCVVRFESSAAQPG FT RFAISKADFIPVEASALSARALSVRDCVTVDVKPRTEGNNVFVGLFLSSAAANAGNVTG FT VISMAQVDHEVTALQPLK" FT gene 5091..6068 FT /gene="H" FT CDS 5091..6068 FT /codon_start=1 FT /transl_table=11 FT /gene="H" FT /product="gpH" FT /note="minor spike protein" FT /db_xref="GOA:Q2LMB3" FT /db_xref="InterPro:IPR006777" FT /db_xref="UniProtKB/TrEMBL:Q2LMB3" FT /protein_id="AAZ48968.1" FT /translation="MLGAVVGGIASALAGGAASKLFGGKSAPQAATESAGLSNGQGVIG FT MDQDAGIQSAIQGSNVPNGQIPAPTTTGGVMSDAGNMIKNAGKDLLDGVMTAGSDRVKQ FT ALIDKLGGNNAKKQGQATRDYLAAAFPELNAWERAGAGASGAGLESSSQDQQKELMRMQ FT LDNQKDIAKMQMQNNLQIAGIQSATSRQNTKDSVYAQNEMLQYNQRESQARVESILANT FT DLTAKQATHEIMRMALTRAQETGQHLTNSQVMALEKKVYAEIGKIHQDTQNARYGSSQV FT TAAAKDVTNMISDAAGGVADWASQQWNSFFKDGKSNGIPLNTRK" XX SQ Sequence 6068 BP; 1418 A; 1302 C; 1445 G; 1903 T; 0 other; ttgttgacat tccctaaatc cttatgagac tcttgcttca gcgaaatgac gcaggagtct 60 ttgcttatga aacccgcaca tcgcttaacc catccggttc tcggttcttg gttgtttaag 120 tgtcctgttt atatccgtta cgaacacctt catcatggtc gtcttattaa ggttcgtgct 180 gttcgcgatt tatcccctcg ccaacagctt attgctaacc ctaaaaattg ctttgacgtt 240 gttattgctg agattgatgt tacttatggc tccctcactt ggtttgatta tgagcatgag 300 gaatatgacg agtttgagcc tgatgttata aaaggcctcg ttaactatat tgaaatccct 360 catgttatcc gttctgagga agatccttct gttgatattg atgatatgga ttggctttat 420 gaaattgcgg agtaaattat ggaaactgtt atcggaaaac ttattgctct ggctgttgtt 480 gctcttatgc tgtatggaat tgcccgtttg attcggaggt ttccgtgaaa tattttagtt 540 tggtagatga acattatgct tactgccctg atacaaggat tttgcacatc actcgtagtc 600 gtgtttctga ccctcgttat gagcgtcgct ttcttactga tgaggagcat tttgcacttt 660 tggattggtt aaaaaatcgc ccaacttata ttaattcttg acaggccttt aaaataccct 720 ctatattgcc ctcatagttt cactacgagg gctttttcgc atggctactg aaatcttctc 780 tgatgttgtt aagtctgttt ggtcgcacgc tacggctaag cattctcatc ttcgtatggc 840 tgtgcaggtt gataaccgta gtcgtcttct ttctgatttg gtttaccagc tggaaaagcg 900 cctctctgaa gagactcatc tggatgatga gacttatgct ctttatgaat ctcaaactgg 960 tctcttggag gaccatatgg cgctggttcg gaagtgtgct gcccaacttg ataatagtaa 1020 cactatagac caccgtactc ctttggactc cgaatgtgtt ttcctctttg agatgatttg 1080 ccccggtgtt cgctacggta aaacattgaa ttctctttgg accaagtatg ttgcccagtg 1140 gcctgagaag ttgattcgtc aggagcttga tatggttaag cctttatcct ttaaggatga 1200 ggttgccaag tacatggaga aaatgcagga aaagacacgc aaaaatcgca tgactcagaa 1260 agtaattaat gagatgcgta ttgctcacca gaaaggctgg ttcttcgtat ttgatacgtt 1320 gacccttgcc gatgaccgtt tgcaggcttt taatgaaaac ccaaatgctc ttcgtgatta 1380 tttcaggact gttggtcgag ctgttctgcg cgctgaaggc cgctcggtta aggattccta 1440 caacgactgc tatcgctatc tttgtgtgcc ggagtttgga ggtcagcatg gccgtcttca 1500 ttggcacgtt gtgcatatgg tgcggactct tcctttggga agtcacgacc ctaatttcgg 1560 tcgcaaggta cgtaattatc gccagattaa ctcgttccgt ggcatgtggc cttatggctt 1620 cacgcaaccg atagctgtac gctatcaaca tgatgcttat tctcgcaaag gttggctgtg 1680 gcatgttgac aaatcaggaa aagcaatgca gagtaagcct tatcaggcgg tcgcatggta 1740 tgtgaccaag tatgtggcta agcagtctga ccagcgtcag aaagctatta ccgagagaca 1800 aaagaaatgc aagaatccac ttatggcaat atgtctgaaa aaggaattca gagttcgcag 1860 cagccggaag ctcggaatgg agttgccgtc gatggcgcat ctcagcaaca aggtacttct 1920 ggaactgagt cgaatcagct tcgattccag ccctctgtat cagatagtga aagagaacgc 1980 caaaaagcaa ttgaccttga acatcggcgc gctgccttta cacgtcattt tggatgtgcg 2040 cccggaagtg agaagtatgt tgaaaaatat ccgtcgtttg atgaaaaaga cacccgagtt 2100 caattggcag agttctatcg cttcaatgac ggtcacctta aaaaatgggg atatttctaa 2160 tgaagcacgt caatacatta ttgatgcagg aattacgcct tctgatttgc gagctaaagc 2220 gactcaaact ttcggcggta agtgacccgg atttttctca ggagaagatt catgctgagc 2280 tcaactcgtt attatgcaag ttatcgcgct actttgacga agcagctgat gtttcttaca 2340 aaggctgact ttacgaatga tgatgaaaag tggcttaacg cttttggtaa tcttcttcgt 2400 cagtggtttg aaattgaaca atggaaaggc aatcataaaa aattgcttga cgacctgaaa 2460 aaacgtaatt acatttgagt tgtttcaaag gtttttaccc ataaatgtta ggagtatgtt 2520 atgtctaatc tcgttgctac cgatgttaat tttgctactt ctgttgctgc tctgaagatg 2580 cttcaggctt cagccgtttt ggatattacc gaagaggatt ttgattttct gactggtgat 2640 aaaatttgga ttgctaccga ccgcaaccgc gcgcgtcgtt gtgtagaggc ttgcgtttat 2700 gggacactgg actttgtcgg gtatcctcgc tttcctgctc ctgttgagtt tattgctgcc 2760 gtcattgctt attatgttca tcccgttaac attcagacgg cctgcctcat catggaaggc 2820 gcggagttta cagaaaatat tgttaatggc gtcgagcgtc cggttaaagc cgctgagctc 2880 ttcgcgtata ccttgcgtgt taaggccgga ttcaaagaga cggttttaag cgctgaggat 2940 aatgctcgtc agaaactgcg tgcaagtgga gttatgtaat atgaaaaaag ctcgtcgttc 3000 tccttctcgt aagaaaggtg ctcgcctctg gtatgtaggc ggttctcaat tttaattaat 3060 ggggcttcgg cccctataag gattcttaaa tgtcaaacgt gcaaacttcc gctgaacgta 3120 ttcctcacga cctctctcat ctggtttttg atgcaggcaa aattggtcgt ttaaaggttg 3180 tttcttggac tcctgttgtt gcaggtgatt cttttgagct tgatatgatt ggcgctattc 3240 gcctttctcc gcttcgtcgt ggccttgctg ttgactctcg cgttgacctg ttcacgtttt 3300 atgttcctca tcgtcatgta tatggtgagc agtggattga gtttatgaag caaggtgttg 3360 atgctgctcc tttggcccct gttcagtgct ctcgcggttg ggatagtgct cagtatcttg 3420 ctaccattcc gtctagtaac ctgaaggttc ctaagtttct tcatcaaggt tacctgaata 3480 tttataacaa ctattttaaa gctccgtgga tggatgattt gacttatgcc aatccgtcca 3540 atatggaagg tgaagatgtt cgttttggtg ttcgcgcatg taacctgaag actatctgga 3600 ctgcccctct gccgccggat accgagacct ctcattctat ggagaccgag actaactcca 3660 ttgatattat gggtttacag gctgcttatg ctcaattgca tactgagcag gagcgtgatt 3720 actttatgac tcgttatcgt gatatcgtta acgaatttgg aggtagcacg tcttatgacg 3780 cggataatcg tcctcttctg gttatgcact ctgagttttg ggcttcaggc tatgacgtcg 3840 acggcaccga ccaaagctct ctcggtcagt tctccggtcg tgtccagcag acgtttaagc 3900 attcagtacc gcgattcttc tgtcctgagc atggcactat gtttacactc gcattggtcc 3960 gcttcccgcc gacccatgag atggagatgc attacttagt tggtaaggaa gatttgactt 4020 atactgattt ggcttgtgac ccagctctga tggctaactt gcctccgcgt gaggttaata 4080 tgtctcagtt cttccattct ggaagtacta gtgctaagtt taagatcgct gaaggtcagt 4140 ggtatcgtat gcagcctgac cgtgttgctc tgccttataa ctatcttgat ggtttcccgt 4200 tctatagcgc gattccgtct gatgatatta agcagcgtgt tctggttaat actgataact 4260 acgatgaggt tttccagtct atgcaacttg ctcactggaa tatgcagact aagtttaact 4320 gcaccattta tcgtaatatg ccgactactc gtgattctat tatgacttct tgattatgtg 4380 gggcttcggc cccctttaag gatttgatta tgtttcaagt ttatgtagct aaacatgttg 4440 ctccgttcac ttccatgaat cgtgcatttt ctatctctcc tgctgctgac ccgcaggttg 4500 ttaactctgg cgagattgtt gctggtcgtt ctaccttccg cattgcttct tctattgatt 4560 cagcttccaa tggtaatggt tttgcattcg ttcagatgat ggaccctaac tctcctgatt 4620 ctcagcaggt cttctctgtt gctgcgtcac tgtcttttag cgttgactcg aattatgtcc 4680 cttgcgttgt tcgctttgag agtagtgctg ctcagcctgg tcgattcgct atttctaagg 4740 ctgattttat tccggttgag gcctccgccc tctctgcgcg cgcgcttagt gttcgtgatt 4800 gtgttactgt tgatgttaag cctcgcactg aaggtaataa cgtctttgtt ggtctattcc 4860 tgtcttctgc tgccgctaat gctggtaatg ttactggtgt tatttcgatg gctcaggttg 4920 accatgaagt tacagctttg cagcctctta aataaaaggc cgccgcactc ccggttatat 4980 gcctgcccag tgtagggcgg accgagccgt acggagatac ccgataaact aggaacgtgg 5040 aaggcgttag ccgccttccc tcctgctaag cccaaaggag actttcagct atgttaggtg 5100 ccgttgtagg tggtattgct tcagccttag ccggtggagc cgcctctaag ttatttggtg 5160 gcaagtctgc ccctcaagcc gctacagagt ccgctggtct atctaacggt caaggtgtta 5220 ttggtatgga ccaagatgcc ggtattcagt ctgctattca gggttcaaat gtcccaaatg 5280 gtcagattcc tgctcctact actacaggtg gcgttatgtc tgatgctggc aatatgatta 5340 agaatgctgg taaagatttg cttgatggtg ttatgactgc tggtagtgac cgcgttaagc 5400 aggctttgat tgataagtta ggtggcaata atgcgaagaa acaaggacaa gcaacccgtg 5460 attacttggc tgcggccttc cctgagctca acgcatggga gcgtgctgga gctggtgctt 5520 ccggcgccgg cttggaatct tccagtcagg accaacagaa agaattgatg cggatgcagt 5580 tggacaacca gaaagatatt gcgaagatgc agatgcagaa taatttgcag attgcaggta 5640 ttcagtccgc tacttctcgt caaaatacga aggattctgt ttatgctcag aatgagatgc 5700 ttcagtacaa tcagcgtgag tcgcaagcgc gtgttgagtc catccttgcc aacactgacc 5760 ttacggctaa acaggccacc catgaaatta tgagaatggc ccttactcgt gctcaggaga 5820 ctggtcaaca cttaactaac tcccaggtta tggcattgga gaaaaaggtt tatgcagaaa 5880 tcggaaaaat tcatcaggat actcaaaatg ctcgttatgg tagctctcaa gttactgctg 5940 cggcgaaaga tgttacaaat atgatttctg atgctgctgg cggtgttgcc gattgggctt 6000 ctcagcagtg gaattctttc tttaaagatg gcaagtctaa tggtattcct ctcaatacca 6060 gaaaataa 6068 //