ID CR626927; SV 1; circular; genomic DNA; STD; PRO; 5205140 BP. XX AC CR626927; XX PR Project:PRJNA46; XX DT 03-MAR-2005 (Rel. 83, Created) DT 01-JUL-2011 (Rel. 109, Last updated, Version 6) XX DE Bacteroides fragilis NCTC 9343, complete genome XX KW complete genome. XX OS Bacteroides fragilis NCTC 9343 OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; OC Bacteroides. XX RN [1] RP 1-5205140 RX DOI; 10.1126/science.1107008. RX PUBMED; 15746427. RA Cerdeno-Tarraga A.M., Patrick S., Crosmann L., Blakely G., Abratt V., RA Lennard N., Duerden B., Poxton I., Harris B., Quail M.A., Barron A., RA Clarck L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., RA Lord A., Norbertczak H., Ormond D., Price C., Rabbinowitsch E., RA Woodward J., Barrel B.G., Parkhill J.; RT "Extensive DNA inversions in the B. fragilis genome control variable gene RT expression"; RL Science 307(5714):1463-1465(2005). XX RN [2] RP 1-5205140 RA Cerdeno-Tarraga A.M.; RT ; RL Submitted (29-JUL-2004) to the INSDC. RL Cerdeno-Tarraga A.M., submitted on behalf of the Pathogen Sequencing Unit, RL Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA RL E-mail: amct@sanger.ac.uk XX DR ENA; ERS000045. DR GR; CR626927_GR. DR RFAM; RF00001; 5S_rRNA. DR RFAM; RF00005; tRNA. DR RFAM; RF00010; RNaseP_bact_a. DR RFAM; RF00023; tmRNA. DR RFAM; RF00059; TPP. DR RFAM; RF00174; Cobalamin. DR RFAM; RF00177; SSU_rRNA_bacteria. DR RFAM; RF01118; PK-G12rRNA. DR RFAM; RF01362; CRISPR-DR49. DR RFAM; RF01692; Bacteroid-trp. DR RFAM; RF01693; Bacteroidales-1. DR RFAM; RF01694; Bacteroides-1. DR RFAM; RF01705; Flavo-1. DR RFAM; RF01726; SAM-II_long_loops. DR RFAM; RF02012; group-II-D1D4-7. DR SILVA-LSU; CR626927. DR SILVA-SSU; CR626927. DR StrainInfo; 5232; 1. XX CC Accession number for plasmid pBF9343 in this genome project: CR626928 XX FH Key Location/Qualifiers FH FT source 1..5205140 FT /organism="Bacteroides fragilis NCTC 9343" FT /strain="ATCC 25285 = NCTC 9343" FT /mol_type="genomic DNA" FT /db_xref="taxon:272559" FT CDS 67..594 FT /transl_table=11 FT /locus_tag="BF9343_0001" FT /old_locus_tag="BF0001" FT /product="putative SpoU rRNA methylase family protein" FT /note="Similar to Bacteroides thetaiotaomicron tRNA/rRNA FT methyltransferase BT3165 SWALL:AAO78271 (EMBL:AE016939) FT (175 aa) fasta scores: E(): 4.1e-62, 90.85% id in 175 aa, FT and to Chlorobium tepidum SpoU rRNA methylase family FT protein CT1255 SWALL:Q8KD02 (EMBL:AE012885) (169 aa) fasta FT scores: E(): 1.3e-21, 41.66% id in 168 aa, and to FT Fusobacterium nucleatum 23S rRNA methyltransferase FN1519 FT SWALL:Q8R6H6 (EMBL:AE010460) (234 aa) fasta scores: E(): FT 5.6e-11, 35.29% id in 153 aa" FT /db_xref="GOA:Q5LJ96" FT /db_xref="InterPro:IPR001537" FT /db_xref="UniProtKB/TrEMBL:Q5LJ96" FT /protein_id="CAH05780.1" FT /translation="MRKLKITELNRISIEEFKEADKLPLVVVLDDIRSLHNIGSVFRTA FT DAFRIECIYLCGITATPPHPEMHKTALGAEFTVDWKYVNNAVETVDNLRSEGYVVYSVE FT QAEGSIMLDELTLDRSKKYAVVMGNEVKGVQQEVIDHSDGCIEIPQYGTKHSLNVSVTA FT GIVIWDLFKKLK" FT misc_feature 136..570 FT /note="Pfam match to entry PF00588 SpoU_methylase, SpoU FT rRNA Methylase family, score 75.5, E-value 9.7e-20" FT CDS 749..2218 FT /transl_table=11 FT /locus_tag="BF9343_0002" FT /old_locus_tag="BF0002" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron outer FT membrane protein TolC, putative BT0857 SWALL:AAO75964 FT (EMBL:AE016929) (490 aa) fasta scores: E(): 4.6e-35, 27.45% FT id in 488 aa, and to Bacteroides thetaiotaomicron outer FT membrane protein TolC, putative BT0671 SWALL:AAO75778 FT (EMBL:AE016928) (499 aa) fasta scores: E(): 2.3e-31, 24.54% FT id in 493 aa, and to Bacteroides thetaiotaomicron putative FT outer membrane protein OprM precursor BT1530 SWALL:AAO76637 FT (EMBL:AE016932) (492 aa) fasta scores: E(): 6.2e-28, 24.74% FT id in 489 aa, and to Neisseria meningitidis putative outer FT membrane lipoprotein MtrE or NMA1968 SWALL:Q9JT52 FT (EMBL:AL162757) (467 aa) fasta scores: E(): 4.8e-05, 20.21% FT id in 371 aa, and to Acinetobacter baumannii AdeC outer FT membrane protein SWALL:Q93E18 (EMBL:AF370885) (465 aa) FT fasta scores: E(): 6.3e-05, 20.53% id in 414 aa" FT /db_xref="GOA:Q5LJ95" FT /db_xref="InterPro:IPR003423" FT /db_xref="UniProtKB/TrEMBL:Q5LJ95" FT /protein_id="CAH05781.1" FT /translation="MKTLLVYILVFSLCYTNAYCQSIPREVTLDEVINRLSLESSSAKI FT ELLNFQNDLLQYENYKKSFLPAFVLNFNPINFNRSLRLLQQPIDGSYSYVEDNSNNTNF FT GTTVRQKISITGGELSIGSNINYLNEFSRKQNSFSTNPFFISYSQQLWGGGKLQRLENK FT IERAKNEVAVKQYCSNIAQIQQQALTLYLSAILSKMDSELAIDIKQSNDTLLHIAEIKL FT RNGSITEYDYKQMELQSLNLQYMYENAVRHYAESRQKLFTFLGIENNAEITIPDFDLPL FT TIDARLAIYYVKKNNPISNQQEIQQLEEEKNLFSIKLKNRFNGNISLNYGINQYAETLA FT DAYRHGNTRQSVIIEFQIPIFQWGINKNNIRIAKNNYDASRLRIEKKIFEFENEVKEKI FT NAYDHSVKLWLTASRAYALSKEQYKMLTKKFSLGKVSVYELATAQKERNDAMQRYYSAI FT KDSYESFFTLRNLALYDFKKNVELEKILFND" FT misc_feature 1721..2110 FT /note="Pfam match to entry PF02321 OEP, Outer membrane FT efflux protein, score 32.3, E-value 2.1e-09" FT CDS 2211..3182 FT /transl_table=11 FT /locus_tag="BF9343_0003" FT /old_locus_tag="BF0003" FT /product="hypothetical protein" FT /note="Limited similarity to Bacteroides thetaiotaomicron FT hypothetical protein BT4283 SWALL:AAO79388 (EMBL:AE016944) FT (329 aa) fasta scores: E(): 1.5e-08, 29.44% id in 180 aa" FT /db_xref="InterPro:IPR007822" FT /db_xref="UniProtKB/TrEMBL:Q5LJ94" FT /protein_id="CAH05782.1" FT /translation="MISDTTIRKLVDYISLNACSVNSSGLYNGKSGISLALFETAKCLQ FT DTEIEDKAFSLFQESLIRKTNDYGFENGMSGIGYVLIYLITNKLIDADFEDLFGDQREA FT IIKHFENIDKQPDKLLVSYKIIYFLFVLDKLQKQDERIYSIIEKIFQGLELYLSLQFFD FT WKNIYYINSKDYVLQMYEAYLKLVDFCNYKYFSKSLMDSYVTLYSEGRIASSLVRGYYL FT HSIITKNNMVGFNDVIRDHIRYGQKNINPAILFLDQKINLTGIIENADENRVKIQRIEM FT DLFEESLERIKRMVRPNCIHVGYQYGLARYLGFCANKKFPLL" FT CDS 3196..4035 FT /transl_table=11 FT /locus_tag="BF9343_0004" FT /old_locus_tag="BF0004" FT /product="putative sugar transferase" FT /note="Similar to Vibrio cholerae sugar transferase FT SWALL:O34234 (EMBL:Y07786) (337 aa) fasta scores: E(): FT 1.7e-22, 40.16% id in 239 aa, and to Bacteroides FT thetaiotaomicron putative glycosyltransferase BT4281 FT SWALL:AAO79386 (EMBL:AE016944) (277 aa) fasta scores: E(): FT 4.5e-42, 41.45% id in 275 aa, and to Vibrio cholerae FT ORF139-19 protein SWALL:P74947 (EMBL:AB012956) (337 aa) FT fasta scores: E(): 1.5e-22, 39.75% id in 249 aa" FT /db_xref="GOA:Q5LJ93" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q5LJ93" FT /protein_id="CAH05783.1" FT /translation="MCEISVVMPVYNAEMHIKDAIESVLEQSFVDFEFILIDDGSTDHT FT SSIIQSYNDKRVRLIQNSHNFIESLNLGIENSLGKYMARMDGDDIMHIDRLKIQYAIMQ FT EYPDVTVCGTWMNSIGTYSQTNGLLSTLSGWVEQPLLKFTKGNFLFHPTTMIRMDFLKK FT NALKYENYPYAEDFKFWVEIAKSGGRFYIDSQPLLYYRISDSQVSSQKSSEQRATTESI FT INEVLEYLMELNKNEYPELAAAYGDLCKLYEKQLLTKCEVLTLFQTLFSKNEKKLNL" FT misc_feature 3208..3690 FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferase, score 121.9, E-value 1e-33" FT CDS 4069..4602 FT /transl_table=11 FT /locus_tag="BF9343_0005" FT /old_locus_tag="BF0005" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ92" FT /protein_id="CAH05784.1" FT /translation="MKKLTRKSLNELAKTMPVIEESLQMSYVGGGNGTSANPYTQAEFD FT NMLSNDNWNGGYVEGMGYVATNTYIYGSSVYSGSVSQMYYTFPDYVTSISSTGWDRFLS FT EAVGLTPLGSLVSHVSQDITNMELSILRELLEKGYNASSSFNFVKTNIPYGGTQISVYD FT AATGQFVTSRTVGE" FT CDS 4663..6468 FT /transl_table=11 FT /locus_tag="BF9343_0006" FT /old_locus_tag="BF0006" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4273 SWALL:AAO79378 (EMBL:AE016944) FT (519 aa) fasta scores: E(): 6e-13, 23.65% id in 503 aa" FT /db_xref="GOA:Q5LJ91" FT /db_xref="InterPro:IPR007815" FT /db_xref="UniProtKB/TrEMBL:Q5LJ91" FT /protein_id="CAH05785.1" FT /translation="MKYLILLASVIFLAQSCSVAPSMRESARSYDWATYTNFSWQSKID FT SAISSYPLLLYPSYEAKGSAGFTVPLFYHMDKKKRADIEVRIKYKTENCNDLYLKLSGI FT SECREVTSVDTFRLSAANTWRVARRSVDIASPLLLGVALEAQGEKPWKKDFPVDPLGSA FT DNSFKPGEYSKIWIDSLDILIDGKYAVEPPSLNNGATASVRELDVIPVNGDDLKSLSFS FT DKRILAIGESVHGTGTMNDMGVEIIKNRIEHGKCRLVLLEMPLTLSFHINRYLEGDERF FT KPDSIASSFDKVLFSSSSFVSLMRWIKEYNRHSEEKVSFFGIDRNIYRLQSSIDLFYFF FT YTLRRGKGDEGLKAICNSLLLSDEKFPFKGADSVLHANHGFKGILTRREAEIMSYCLNA FT EEEATVDELNRFRGRDSGMYENAKFLMKTMLKKDETTTVYCHLGHANYTSIAGWLGSDM FT RPFGEYMKGSYGDDYSAVGLLAGGGSYLTWVFPGKMGIRRLQSSSSAGLEYCIERSGIS FT PCYLSMDKLSDADVLKMRYIGNTESKIGQFQWVFPKCMMDGVLFTKNASAINKREEFFK FT MNLDYHVQTLFALMYLYEKKRKWIP" FT misc_feature 4663..4719 FT /note="Signal peptide predicted for BF0006 by SignalP 2.0 FT HMM (Signal peptide probability 0.992) with cleavage site FT probability 0.647 between residues 19 and 20" FT misc_feature 4681..4713 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 6658..8469 FT /transl_table=11 FT /locus_tag="BF9343_0007" FT /old_locus_tag="BF0007" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4273 SWALL:AAO79378 (EMBL:AE016944) FT (519 aa) fasta scores: E(): 1.1e-15, 26.02% id in 488 aa" FT /db_xref="GOA:Q5LJ90" FT /db_xref="InterPro:IPR007815" FT /db_xref="UniProtKB/TrEMBL:Q5LJ90" FT /protein_id="CAH05786.1" FT /translation="MNSITKLHVLFFFVFIFYAVSCTAKLEKQTYTNVYDLHFAMRFDS FT AVVYPWRENGAYSNYTIPAYIQDSNRNLFAKKYFKGFPFSKRLRSEYEQRILLPNNNIK FT EAVIGFEGKGDNIKLVSIILDAIGKQENILFSDTLRFRPDSILSLVTQNINLNNAEMLN FT VRINVEGEIDKNAYIAFSRLDILIDGKPIDEFPVRTLSPLIVDKKINYTGINVDRKIGL FT EQINEINDKKIIGLGESVHGNDGIKNLAYQLIIQAVERLNCKLVLQEMPLEQSFAYNRF FT IQDDNYELDSSLVINHATINFLKRLRSFNSGKTKDSKVKLYGMDYNSILSSTQSSAMDI FT FDFITGLNKKSQIPEVDQLSLLLMKKDRNCAINFLDIHRDKIKKLLTAEEIECILHILR FT VSKQAGDGGIERFIRRDSIMFVNARFLIDKFAKDENVKTVIYGHAGHINPISSYPAVPC FT IPFGRYMRKAYGESYSPLLFLIGSGEAMAYDEHYNRKDNWLSSPPENSMEYFLSLIDDN FT VFYTPLTVDFNELTLSRLQGSHHIPQEFYPFNLYQRFKGVFFIKSTDCTHKDEKEISFE FT KASDRLIMKIKQRQEKIKEIQKRIENL" FT misc_feature 6658..6729 FT /note="Signal peptide predicted for BF0007 by SignalP 2.0 FT HMM (Signal peptide probability 0.940) with cleavage site FT probability 0.683 between residues 24 and 25" FT CDS 8625..9743 FT /transl_table=11 FT /locus_tag="BF9343_0008" FT /old_locus_tag="BF0008" FT /product="putative glycosyltransferase" FT /note="Similar to N-terminus of Bacteroides FT thetaiotaomicron putative glycosyltransferase BT4280 FT SWALL:Q89ZU4 (EMBL:AE016944) (577 aa) fasta scores: E(): FT 8.8e-59, 43.73% id in 375 aa, and to entire protein of FT Streptococcus thermophilus EPS10P SWALL:Q8GP63 FT (EMBL:AF454500) (376 aa) fasta scores: E(): 4.2e-21, 27.48% FT id in 382 aa, and to Thermoanaerobacter tengcongensis FT predicted glycosyltransferases RfaG2 or TTE0275 FT SWALL:Q8RCY0 (EMBL:AE013000) (404 aa) fasta scores: E(): FT 5.7e-09, 25.66% id in 300 aa" FT /db_xref="GOA:Q5LJ89" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q5LJ89" FT /protein_id="CAH05787.1" FT /translation="MNIAFLTTLNPADINNWSGTTFHLFHALSRKHHVKVIGQNTLPQA FT AYFTKDNCIKKNPLENYVSVFGKLCTEQLTNYDLVFFGDLYLAPFLDVNVPVVHLSDVT FT YHSFQSYLNPLKNEEQIKKIEMMEKKLLNKYTAIIYSSEWAKQSTINYYDIEPGKIHVV FT EFGANIPTPSDYKIDIQTDICNLVFIGKNWQKKGGDKVLGAYRKLKSDGFRCTLTIIGS FT IIREPYDEDENLVIIPYLDKSQPEHLERFCNILQEAHFLVLPTEFDAFGIVFCEASAYA FT VPSIAANVGGVSQPVREGKNGYLLMPDATAEDYAEKIKSVFADKENYLKLRMSSRQEFE FT TRLNWEVWSEKVNKILEEIVEEHHKNNGNKQQ" FT misc_feature 9129..9638 FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 38.2, E-value 1.6e-08" FT CDS 9724..10392 FT /transl_table=11 FT /locus_tag="BF9343_0009" FT /old_locus_tag="BF0009" FT /product="putative glycosyltransferase" FT /note="Similar to C-terminus of Bacteroides FT thetaiotaomicron putative glycosyltransferase BT4280 FT SWALL:Q89ZU4 (EMBL:AE016944) (577 aa) fasta scores: E(): FT 1.4e-45, 57.35% id in 204 aa, and to entire Yersinia pestis FT hypothetical protein YPO1382 or Y2791 SWALL:Q8ZGC1 FT (EMBL:AJ414148) (224 aa) fasta scores: E(): 0.48, 25.78% id FT in 190 aa" FT /db_xref="GOA:Q5LJ88" FT /db_xref="InterPro:IPR002654" FT /db_xref="UniProtKB/TrEMBL:Q5LJ88" FT /protein_id="CAH05788.1" FT /translation="MGTNNSDFYLPVYVINLKERTERRQHIEEQFQGKVEFALHWIEAI FT EHSIGAVGLWQSMLKAVQTAIDKRDDIMIICEDDHIFTPAYNKDYLFANIIGANAQGSE FT LLSGGVGGFGTAVPVDTNRYWMDWFWSTQFIIIFKPLFQKILDYDFKDTDTADGVLSVL FT AKDKMTIYPFISVQKDFGYSDVTVYNGTPGMISNYFSQANYRLRMIHHVSHKFKEQAKR FT " FT CDS 10512..11747 FT /transl_table=11 FT /locus_tag="BF9343_0010" FT /old_locus_tag="BF0010" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT hemolysin secretion protein BT4289 SWALL:AAO79394 FT (EMBL:AE016944) (416 aa) fasta scores: E(): 1.2e-35, 30.69% FT id in 417 aa, and to Anabaena sp. hypothetical protein FT ALR1928 SWALL:Q8YVP6 (EMBL:AP003587) (512 aa) fasta scores: FT E(): 8.4e-09, 24.47% id in 286 aa, and to Xylella FT fastidiosa colicin V secretion protein XF1216 SWALL:Q9PE12 FT (EMBL:AE003955) (420 aa) fasta scores: E(): 7.7e-08, 21.15% FT id in 416 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LJ87" FT /protein_id="CAH05789.1" FT /translation="MPTYWAKWVILCVGVLMGMIILLGFLIQYPDTVDGQISVTANAAP FT VRLVANSNGRITLFQPNKALLHKNDVISCIESGADYKHILWIDSFLKTLSDKSTIRVAL FT PDTLLLGEVSSAYNSFLLSFLQYERLLTSDIYSTMRQKLQQQIISDEAVIANFNNELRL FT KKQILDNSQNQLSKDSILLSMKGISEQEYQQKFSTHLSLKESQLNLQSNRQMKQSEISR FT NQLEIQRICLEETEAKEKAYSDYITRKNELSNAIKLWKEHYLQYAPVEGELEYLGFWRN FT NRFVQSGQELFSIIPDKTNILGEVVIPSFGAGKVEVGQTVNVKMDNYPYDEYGLLKGVV FT KSVSRITNKIKTQNGDMDTYLVIISFPDGTLTNFGKILPLDFETKGTVEIITKRKRLIE FT RLFDNLKSKGEK" FT misc_feature 10512..10592 FT /note="Signal peptide predicted for BF0010 by SignalP 2.0 FT HMM (Signal peptide probability 0.663) with cleavage site FT probability 0.625 between residues 43 and 44" FT CDS 11752..13935 FT /transl_table=11 FT /locus_tag="BF9343_0011" FT /old_locus_tag="BF0011" FT /product="putative ABC transporter ATP-binding protein" FT /note="Similar to Riemerella anatipestifer ABC transporter FT SWALL:Q9AM85 (EMBL:AF327734) (678 aa) fasta scores: E(): FT 2.1e-88, 37.46% id in 670 aa, and to Bacteroides FT thetaiotaomicron ABC transporter ATP-binding protein BT4288 FT SWALL:AAO79393 (EMBL:AE016944) (741 aa) fasta scores: E(): FT 1.4e-177, 62.63% id in 728 aa, and to Anabaena sp. ABC FT transporter ATP-binding protein ALR1927 SWALL:Q8YVP7 FT (EMBL:AP003587) (1011 aa) fasta scores: E(): 1.6e-58, FT 32.69% id in 728 aa" FT /db_xref="GOA:Q5LJ86" FT /db_xref="InterPro:IPR001140" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR005074" FT /db_xref="InterPro:IPR011527" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:Q5LJ86" FT /protein_id="CAH05790.1" FT /translation="MLLHRFPVEYQMDSQDCGPASLKIIAKHFGKFYSLQFMRDRCGIT FT KEGVSLLDLSTGAESIGLRTLAIKCTIDDVVNSIPFPAIVFWNDSHFIVVYHSDRKYIW FT VSDPAKGRIKYTHEEFRKGWYQRDESQGVLLAVEPTTDFKNSKAEQEQKRNSFSSILKY FT FFPYKKSFGLIFIIMLVVTVLQGMLPFISKAVIDVGIKTSDRNFINMVLIGNICILLSV FT MIFNVLRDWILLHITARVNIALISDYLIKLMKLPVTFFENKLLGDILQRAQDHERIRSF FT IMNNSLALIFSTLTFAVFSIILLIYNTIIFYIFLSGSVLYACWVLLFLSIRKKLDWEYF FT ELLSKNQSYWVETVSTIQDIKIYNYDKYRRWKWEEIQARLYHVNKRVLAITNAQNLGAQ FT FIENIKNMAIVFFCAMAVIKGEITFGIMISTQFIIGMLNGPLVQFINFVVSAQYAKISF FT LRINEIRQLENEDELLSIGSTTILPERKTILLENIHFQYTPNSPLVLRNIYLQIPENKI FT TAIVGGSGSGKSTLLKLLVRLYKPSHGEIKMDKMNVSAINLRQWRNMCGVVMQDGKIFS FT DTILNNIVLDDEQINYTRLREVCRIAQIEDEINAMPKGFETTIGETGRGLSGGQKQRLL FT IARALYRDPKFLFMDEATNSLDSINERKIVNALNNAFEQRTVVVIAHRLSTIRNADQIV FT VLDKGFIVETGTHEILMEKKGHYFELVSSQVQD" FT misc_feature 11776..12177 FT /note="Pfam match to entry PF03412 Peptidase_C39, Peptidase FT C39 family, score 123.2, E-value 4.1e-34" FT misc_feature order(12259..12327,12370..12438,12592..12660,12673..12741, FT 12973..13041) FT /note="5 probable transmembrane helices predicted for FT BF0011 by TMHMM2.0 at aa 170-192, 207-229, 281-303, 308-330 FT and 408-430" FT misc_feature 12262..13074 FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transporter transmembrane region, score 74.1, E-value FT 2.4e-19" FT misc_feature 13294..13848 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 192.2, E-value 6.8e-55" FT misc_feature 13315..13338 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 13627..13671 FT /note="PS00211 ABC transporters family signature." FT CDS complement(14052..14651) FT /transl_table=11 FT /locus_tag="BF9343_0012" FT /old_locus_tag="BF0012" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3166 SWALL:AAO78272 (EMBL:AE016939) FT (190 aa) fasta scores: E(): 2.9e-56, 77.36% id in 190 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LJ85" FT /protein_id="CAH05791.1" FT /translation="MRLTIGLLMLSIALLFSSESLAQEKTNLGGYLVPMCVYNGDTIPA FT FQIPTIHIFKPLKFRNRKEQMEYYKLVRNVKKVYPIAREINRTIIETYEYLQTLPNEKA FT RQRHIKRVEKGLKEQYTPRMKKLSFAQGKLLIKLIDRQSHQSSYELVKAFMGPFKAGFY FT QTFAALFGASLKKQYDPEGEDKLTERVILLVESGQL" FT misc_feature complement(14586..14651) FT /note="Signal peptide predicted for BF0012 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 1.000 between residues 22 and 23" FT CDS 14771..16798 FT /transl_table=11 FT /locus_tag="BF9343_0013" FT /old_locus_tag="BF0013" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3167 SWALL:AAO78273 (EMBL:AE016939) FT (682 aa) fasta scores: E(): 2.7e-177, 60.05% id in 681 aa, FT and to Chlorobium tepidum hypothetical protein CT0480 FT SWALL:Q8KF52 (EMBL:AE012824) (667 aa) fasta scores: E(): FT 6.7e-19, 26.65% id in 664 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LJ84" FT /protein_id="CAH05792.1" FT /translation="MNESISILSIFLLVNMTLITSTCHAQNRSDYPWEEVMENLSISDE FT EGDIRNWENELEELTDLVNNPVNINSATKEQLQRFPFLNDVQIENLLAYIYIHGSMQTV FT YELQLVEELDRQTIQYLLPFVCVEPVDKKESVTLKQILKYGKHEAVTRMDVPLYKRKGY FT EKNYLGPAVYNSVKYGFHYREKVYAGIVAEKDSGEPFGALHNKQGYDYYSFYLLLHDIG FT ILKTGIVGNYRLNFGQGLVLGQGSMFGKTAYSSSFTFRSTGIRRHTSTDEYNYFRGSGI FT ALKWKQWTLSVFYSHRSLDGVIKGGEITSIYKTGLHRSEKEADKMNQLTMQMSGGNISY FT TGNSYQLGITGVYYCFNRSYEPELKDYSKYNLHGRSFYNLGMDYKYRFHRFSIQGEAAL FT GISGMAFMNQVLYSPLQDIRLMLVHRYYSHDYWAMFAHSFSEGSSVQNENGWYLAASVN FT PFNRWTFFVSADLFSFPWWRYRISKASKGVDLLFQADYVPSKTVDMYVNYRYKQKERDV FT TGTQGKVILPTYHHRLRYRLNYLPCSSLSLRTTVDYNHFHSSGKTAGQGYQLTQTAGWK FT LPWLPLTTELQGSYFHTDDYDSRIYIYEKGLLYSFYTPSFQGEGIRLAIHFRYDMNKHW FT TAIAKLGQTTYFDRDEIGSGNDLIRGNKKTDVQMQLRLKF" FT misc_feature 14771..14845 FT /note="Signal peptide predicted for BF0013 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.995 between residues 25 and 26" FT CDS 16856..17629 FT /transl_table=11 FT /locus_tag="BF9343_0014" FT /old_locus_tag="BF0014" FT /product="putative SAM superfamily protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT Fe-S oxidoreductase BT3168 SWALL:AAO78274 (EMBL:AE016939) FT (257 aa) fasta scores: E(): 8.2e-83, 79.76% id in 257 aa, FT and to Helicobacter pylori hypothetical protein HP0117 FT SWALL:Y117_HELPY (SWALL:P56080) (308 aa) fasta scores: E(): FT 1.5e-13, 31.37% id in 255 aa, and to Thermoplasma FT acidophilum hypothetical protein TA1466 SWALL:Q9HI79 FT (EMBL:AL445067) (325 aa) fasta scores: E(): 1.6e-13, 32.97% FT id in 188 aa" FT /db_xref="GOA:Q5LJ83" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/TrEMBL:Q5LJ83" FT /protein_id="CAH05793.1" FT /translation="MTIIFPSPIFGPVHSRRLGVSLGINLLPSDGKVCSFDCIYCECGY FT NGEHRPKSSLPTREEVCMALEEKLKEMKSNGPAPDVLTFAGNGEPTAHPHFPEIIEDTL FT ALRDAYFPDAKVSVLSNATFINRPAVFDALNRVDNNILKLDTVDEEYIRTVDRPNGRYD FT LNGTVGLLKAFKGNCIVQTMFMKGKYKGKDVDNTSDKYVLPWLKVVKDIAPRQVMIYTI FT DRETPDQDLQKATHEELDRIVALLTKEGLSASASY" FT misc_feature 16937..17458 FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 27.7, E-value 2.3e-05" FT CDS 17671..18180 FT /transl_table=11 FT /locus_tag="BF9343_0015" FT /old_locus_tag="BF0015" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT0585 SWALL:AAO75692 (EMBL:AE016928) FT (169 aa) fasta scores: E(): 9.3e-45, 65.08% id in 169 aa, FT and to Clostridium tetani conserved protein CTC01047 FT SWALL:AAO35630 (EMBL:AE015939) (164 aa) fasta scores: E(): FT 1.3e-13, 36.07% id in 158 aa, and to Fusobacterium FT nucleatum hypothetical cytosolic protein FN0320 FT SWALL:Q8RGH5 (EMBL:AE010544) (180 aa) fasta scores: E(): FT 6.1e-09, 30.85% id in 175 aa" FT /db_xref="GOA:Q5LJ82" FT /db_xref="InterPro:IPR002563" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="UniProtKB/TrEMBL:Q5LJ82" FT /protein_id="CAH05794.1" FT /translation="MMKPIAVSQLSDNFFETISKEWMLVTAGNKNAFNTMTANWGGIGF FT LWNKPVVYVFIRPERYTFGFMEKSDYFTLSFLGEENKSIHKICGSKSGREVDKIKETGL FT KPMITDKGNVLFEQGRLSLECRKLYTDVLRKENFLDPSVYEQWYTTHGGLHHVYVAEIT FT SAWIKD" FT CDS 18198..19811 FT /transl_table=11 FT /locus_tag="BF9343_0016" FT /old_locus_tag="BF0016" FT /product="putative arylsulfatase precursor" FT /EC_number="3.1.6.1" FT /note="Similar to Klebsiella pneumoniae arylsulfatase FT precursor AtsA SWALL:Q9X759 (EMBL:AJ131525) (577 aa) fasta FT scores: E(): 1.2e-37, 32.13% id in 529 aa, and to FT Bacteroides thetaiotaomicron arylsulfatase BT4683 FT SWALL:AAO79788 (EMBL:AE016946) (523 aa) fasta scores: E(): FT 2.8e-145, 66.93% id in 499 aa, and to Bacteroides FT thetaiotaomicron arylsulfatase BT3093 SWALL:AAO78199 FT (EMBL:AE016939) (540 aa) fasta scores: E(): 1.1e-45, 39.32% FT id in 534 aa" FT /db_xref="GOA:Q5LJ81" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR024607" FT /db_xref="UniProtKB/TrEMBL:Q5LJ81" FT /protein_id="CAH05795.1" FT /translation="MKNNCLICSLLFASGIQNAWGTQITDRKANPDQAKPNIILIMCDD FT MGFSDLSCYGGEVHTPHIDFLAENGIRFSQFKNTGRSCPSRAALLTGRYQHEVGMGWMT FT AVDEHRPGYRGQISDRYPTIAEVFRENGYHTYMSGKWHVTVEGAFTQPNGSYPVERGFE FT KYYGCLSGGGSYYTPKPVFSGLQRITEFPKDYYYTTAITDSAVSFIRQHPVDEPMFMYL FT AHYAPHLPLQAPKERVEACREKYKAGYDVLRKQRFERIRRNGLIDIERELPVFEKEFGG FT KRPAWNSLTPQQQERWITEMATYAAMIEIMDDGIGEVIKATKEKGIFDNTIFLFLTDNG FT ATNEGDMITQLRADLSNTPFRSYKQWCFQGGTSAPLIIMYGGGQPDGKKGAVRHEFTHI FT IDLFPTCLDMASIEYPREFRNHAIDAPGGRTILPALKGKKLSKRDLFFEHQTSCGIISG FT DWKLVRANGKQPWELFNLLQDPFEQNDLSARYPDRVKTLEKKWNQWAEKQQVFPFEYRP FT WTKRINYYKSLYPDQSGKDL" FT misc_feature 18198..18260 FT /note="Signal peptide predicted for BF0016 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.517 between residues 21 and 22" FT misc_feature 18303..19487 FT /note="Pfam match to entry PF00884 Sulfatase, Sulfatase, FT score 161.1, E-value 1.6e-45" FT misc_feature 19368..19397 FT /note="PS00142 Neutral zinc metallopeptidases, zinc-binding FT region signature." FT CDS complement(19915..20418) FT /transl_table=11 FT /locus_tag="BF9343_0017" FT /old_locus_tag="BF0017" FT /product="conserved hypothetical iron transport-related FT transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein, putative iron uptake factor BT2063 FT SWALL:AAO77170 (EMBL:AE016934) (429 aa) fasta scores: E(): FT 9e-15, 43.69% id in 119 aa, and to Xanthomonas campestris FT iron-uptake factor PiuB or XCC3955 SWALL:Q8P3W4 FT (EMBL:AE012516) (839 aa) fasta scores: E(): 1.9e-09, 38.88% FT id in 108 aa, and to Bradyrhizobium japonicum protein FT BLL7967 SWALL:BAC53232 (EMBL:AP005964) (398 aa) fasta FT scores: E(): 1.9e-09, 38.23% id in 102 aa" FT /db_xref="GOA:Q5LJ80" FT /db_xref="UniProtKB/TrEMBL:Q5LJ80" FT /protein_id="CAH05796.1" FT /translation="MGYDSIRESPLMIVMKLHRWLMDDTRTTGKMIVGISTLFFIFILI FT SGLTVYWPRKWKKSRLIIEHQKGRRRLMFDLHSVLGLYAALILLVCALTGLMWSFQWYR FT DIVSFIFDAEVKRGAPIWKIVRALHFGTYAGMFSKIVTFIAALIGTSLPVTGYWMYLKR FT KKLL" FT misc_feature complement(19924..20418) FT /note="Pfam match to entry PF03929 DUF337, Uncharacterized FT iron-regulated membrane protein (DUF337), score -62.7, FT E-value 0.00022" FT misc_feature complement(order(19936..20001,20116..20184,20260..20328)) FT /note="3 probable transmembrane helices predicted for FT BF0017 by TMHMM2.0 at aa 31-53, 79-101 and 140-161" FT CDS complement(20542..22956) FT /transl_table=11 FT /locus_tag="BF9343_0018" FT /old_locus_tag="BF0018" FT /product="putative iron transport receptor protein" FT /note="Similar to Salmonella typhimurium ferrichrome iron FT receptor FhuA SWALL:O86925 (EMBL:Y14025) (729 aa) fasta FT scores: E(): 3.2e-30, 24.85% id in 684 aa, and to Anabaena FT sp. ferrichrome-iron receptor ALR2626 SWALL:Q8YTT7 FT (EMBL:AP003590) (872 aa) fasta scores: E(): 1.2e-43, 28.55% FT id in 676 aa, and to Anabaena sp. ferrichrome iron receptor FT ALL4924 SWALL:Q8YMK9 (EMBL:AP003598) (858 aa) fasta scores: FT E(): 1.3e-37, 25.97% id in 716 aa" FT /db_xref="GOA:Q5LJ79" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR010105" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="UniProtKB/TrEMBL:Q5LJ79" FT /protein_id="CAH05797.1" FT /translation="MKQIYSTLLLLVLLIFPSLLFATEPESVDRVPAIRGVVYDETDTP FT LASATVQIEGTTIGTTTNSEGRFILRNLARKVYKINVSFVGYVTQTRTVDLTSRSVAQL FT SFTLLPDDNLLSTVEVFGERYKQPKKLDAITRMPLRPSEQIQSISVISEKSITEQGALT FT VTDVARNVPGVTLFGSYGGVRESMSIRGYRGVPILKNGVRIDSDFRTGSALSEMQGVES FT IQVIKGSAAVTQGIGNDLGSAGGVINVVTKTPKFTNEGEVSLRAGSWGLFRPTFDVQSV FT LDKNQTIAFRMNGAFERSDNYRPVIHSNRVYINPSLEWRPDDKTSVTIEMDYLNDNRTP FT YTSSVNLSKDTEENLYDMPHNKFLGFKNDNVNNKTLTYAARITRQLTDNISVRAAYFGS FT SYKVDNTSTSVKTVVNKEYNMRRRTISRSLRDDRNSTFQLDFIGRDIFTGPVKHTFQLG FT FDYKNTDLSITNYTPVNIDTINVLAPSISNVLPVAVKFVPETPVESNSSSYGIMAQEVM FT TFNKYIKAILGLRYSYISSQDGTSAGPTTGDAWNPMLGIMLTPIKNINLFGSYTTTTSL FT LHAARRMENGDEIGPSKTRQFEVGIKSDWLNNRLRFNLTYFDILTKNLSYSTYHPGTTQ FT PTGYFDKAGSLKRKGIETELSGSILENLQVMMGYAYLDAKYENSPAFKNGSAPMNTPKH FT TANGWIQYRFDKGVLKRLSAGIGVYFVGKRPVNDFAIKPDGHGSMTNEKPFDMPGYTTI FT NAQLAYSIHKFTARVYLNNLFDALGYNSYYRGGYINQIDPRNFSAVISYHF" FT misc_feature complement(20545..22533) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 253.8, E-value 2e-73" FT misc_feature complement(21667..21732) FT /note="Predicted helix-turn-helix motif with score 994.000, FT SD 2.57 at aa 409-430, sequence SVKTVVNKEYNMRRRTISRSLR" FT misc_feature complement(22891..22956) FT /note="Signal peptide predicted for BF0018 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.999 between residues 22 and 23" FT CDS complement(23157..24836) FT /transl_table=11 FT /locus_tag="BF9343_0019" FT /old_locus_tag="BF0019" FT /product="putative sulfate permease transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT sulfate transporter, permease BT3181 SWALL:AAO78287 FT (EMBL:AE016939) (559 aa) fasta scores: E(): 8.6e-190, FT 88.17% id in 558 aa, and to Chlorobium tepidum sulfate FT transporter family protein CT0714 SWALL:Q8KEH5 FT (EMBL:AE012842) (618 aa) fasta scores: E(): 6.6e-107, FT 52.61% id in 555 aa, and to Clostridium perfringens FT probable sulfate permease CPE1480 SWALL:Q8XKC0 FT (EMBL:AP003190) (551 aa) fasta scores: E(): 2.1e-106, FT 51.79% id in 558 aa" FT /db_xref="GOA:Q5LJ78" FT /db_xref="InterPro:IPR001902" FT /db_xref="InterPro:IPR002645" FT /db_xref="InterPro:IPR011547" FT /db_xref="UniProtKB/TrEMBL:Q5LJ78" FT /protein_id="CAH05798.1" FT /translation="MKVLDFKPRLFSTLKNYSKETFMSDLMAGIIVGIVALPLAIAFGI FT ASGVSPEKGIITAIIAGFIISLLGGSKVQIGGPTGAFIVIIYGIIQQYGEAGLIVATLM FT AGILLILLGVFKLGAIIKFIPYPIIVGFTSGIAVTIFTTQIADIFGLNFGGEKVPGDFI FT GKWMIYFRHFDTVNWWNAVVSILSIIIIAITPRFSKKIPGSLIAIIVVTIGVYVLKTYA FT GIDSIDTIGDRFTIKSELPEAAIPTLNWEAIKDLFPVAITIAVLGAIESLLSATVADGV FT TGDKHDSNTELIAQGTANLITPLFGGIPATGAIARTMTNINNGGKTPVAGIIHAIVLLL FT ILLFLMPLAQYIPMACLAGVLVIVSYNMSEWRTFKALLKNPKSDVTVLLITFFLTIIFD FT LTIAIEVGLVIACILFMRRVMETTEISVIKDEIDPNDELDIAACEEHLIIPAGVEVYEI FT NGPYFFGIATKFEETMAQLGDRPKVRIIRMRKVPFIDSTGIHNLTSLCKMSQKEKITIV FT LSGVNEKVHKTLEKSGFYELLGKQNICPNINVALDRAKEIIN" FT misc_feature complement(23187..23501) FT /note="Pfam match to entry PF01740 STAS, STAS domain, score FT 55.1, E-value 1.3e-13" FT misc_feature complement(23580..24503) FT /note="Pfam match to entry PF00916 Sulfate_transp, Sulfate FT transporter family, score 306.8, E-value 2.3e-89" FT misc_feature complement(order(23607..23675,23733..23786,23796..23855, FT 23892..23960,24003..24071,24183..24236,24246..24314, FT 24414..24482,24492..24551,24570..24674,24702..24761)) FT /note="11 probable transmembrane helices predicted for FT BF0019 by TMHMM2.0 at aa 26-45, 55-89, 96-115, 119-141, FT 175-197, 201-218, 256-278, 293-315, 328-347, 351-368 and FT 388-410" FT CDS 25097..25675 FT /transl_table=11 FT /gene="rbr" FT /gene_synonym="rr" FT /locus_tag="BF9343_0020" FT /old_locus_tag="BF0020" FT /product="putative rubrerythrin" FT /note="Similar to Porphyromonas gingivalis rubrerythrin Rr FT or Rbr SWALL:RUBY_PORGI (SWALL:Q9AGG3) (200 aa) fasta FT scores: E(): 2.7e-49, 66.66% id in 192 aa, and to FT Bacteroides thetaiotaomicron rubrerythrin BT3182 FT SWALL:AAO78288 (EMBL:AE016939) (192 aa) fasta scores: E(): FT 4.8e-71, 94.79% id in 192 aa, and to Moorella thermoacetica FT rubrerythrin Rbr SWALL:Q9RMF8 (EMBL:AF202316) (191 aa) FT fasta scores: E(): 1.9e-46, 67.19% id in 189 aa" FT /db_xref="GOA:Q5LJ77" FT /db_xref="InterPro:IPR003251" FT /db_xref="InterPro:IPR004039" FT /db_xref="InterPro:IPR009040" FT /db_xref="InterPro:IPR009078" FT /db_xref="InterPro:IPR012347" FT /db_xref="InterPro:IPR024934" FT /db_xref="UniProtKB/TrEMBL:Q5LJ77" FT /protein_id="CAH05799.1" FT /translation="MTKSIKGTQTEKNLLTSFAGESQARMRYTYFASVAKKEGYEQIAA FT IFTETADQEKEHAKRMFKFLEGGMVEITASYPAGVIGNTLQNLQAAAAGEHEEWSLDYP FT HFADVAEQEGFPMIAAMYRNISIAEKGHEERYLAFVKNIEVASVFAKEGEVVWQCRNCG FT YIEVGKEAPEVCPACLHPQAYFEIKKENY" FT misc_feature 25121..25525 FT /note="Pfam match to entry PF02915 Rubrerythrin, FT Rubrerythrin, score 209.4, E-value 4.7e-60" FT CDS complement(25759..27330) FT /transl_table=11 FT /gene="nadB" FT /gene_synonym="nicB" FT /locus_tag="BF9343_0021" FT /old_locus_tag="BF0021" FT /product="putative exported L-aspartate oxidase" FT /EC_number="1.4.3.16" FT /note="Similar to Escherichia coli L-aspartate oxidase NadB FT or NicB or B2574 SWALL:NADB_ECOLI (SWALL:P10902) (540 aa) FT fasta scores: E(): 6.3e-85, 46.4% id in 528 aa, and to FT Bacteroides thetaiotaomicron L-aspartate oxidase BT3184 FT SWALL:AAO78290 (EMBL:AE016939) (523 aa) fasta scores: E(): FT 1.7e-194, 94.07% id in 523 aa, and to Chlorobium tepidum FT L-aspartate oxidase NadB or CT0561 SWALL:Q8KEX1 FT (EMBL:AE012830) (531 aa) fasta scores: E(): 1.2e-100, FT 51.83% id in 517 aa" FT /db_xref="GOA:Q5LJ76" FT /db_xref="InterPro:IPR003953" FT /db_xref="InterPro:IPR004112" FT /db_xref="InterPro:IPR005288" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR015939" FT /db_xref="UniProtKB/TrEMBL:Q5LJ76" FT /protein_id="CAH05800.1" FT /translation="MVKKFDFLVIGSGIAGMSFALKVAHKGKVALVCKSGLEEANTYFA FT QGGVASVTNLLVDNFEKHIEDTMIAGDWISDRTAVEKVVREAPAQIQELISWGVNFDKN FT EKGEFDLHREGGHSEFRILHHKDNTGAEIQDSLIRAVQQHPNITVIENHFAIEILTQHH FT LGVTVTRQTPNIKCYGAYILDPKTGKVDTYLAKVTLMATGGVGAVYQTTTNPLVATGDG FT IAMVYRAKGTVKDMEFVQFHPTALYHPGDRPSFLITEAMRGYGGVLRTMDGKEFMQKYD FT PRLSLAPRDIVARAIDNEMKNRGDDHVYLDVTHKDPEETKKHFPNIYEKCLSLGIDITR FT EYIPVAPSAHYLCGGIKVDLNGQSSIERLYAAGECSCTGLHGGNRLASNSLIEAVVYAD FT AAARHCLSVIDQYTYNEEIPEWNDEGTRSPEEMVLITQSMKEVNQIMSTYVGIVRSDLR FT LKRAWDRLDILYEETESLFKRSVASKEICELRNMINVGYLIMRMAMERKESRGLHYTVD FT YPHAGK" FT misc_feature complement(25762..26016) FT /note="Pfam match to entry PF02910 succ_DH_flav_C, Fumarate FT reductase/succinate dehydrogenase flavoprotein C-terminal FT domain, score 4.7, E-value 3.9e-08" FT misc_feature complement(26080..27024) FT /note="Pfam match to entry PF00890 FAD_binding_2, FAD FT binding domain, score 439.8, E-value 2e-129" FT misc_feature complement(27271..27330) FT /note="Signal peptide predicted for BF0021 by SignalP 2.0 FT HMM (Signal peptide probability 0.835) with cleavage site FT probability 0.723 between residues 20 and 21" FT CDS 27438..27836 FT /transl_table=11 FT /locus_tag="BF9343_0022" FT /old_locus_tag="BF0022" FT /product="conserved hypothetical transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3185 SWALL:AAO78291 (EMBL:AE016939) (131 aa) FT fasta scores: E(): 4.7e-38, 77.16% id in 127 aa" FT /db_xref="GOA:Q5LJ75" FT /db_xref="InterPro:IPR009589" FT /db_xref="UniProtKB/TrEMBL:Q5LJ75" FT /protein_id="CAH05801.1" FT /translation="MNRIFHARIVWYQYFLLVVLGVNAFGFLWCKNIILATLMMLFLIV FT VIEQIIHTVYTVTADGLLLLNHGRFIRKKTIPIAEITSIRKVHSMKFGSFSVTNYLLIE FT YGKGKYASVLPVKEKEFMELIEKTRNLI" FT misc_feature order(27456..27524,27534..27602) FT /note="2 probable transmembrane helices predicted for FT BF0022 by TMHMM2.0 at aa 7-29 and 33-55" FT CDS 27843..29186 FT /transl_table=11 FT /gene="pdhD" FT /locus_tag="BF9343_0023" FT /old_locus_tag="BF0023" FT /product="putative dihydrolipoamide dehydrogenase" FT /EC_number="1.8.1.4" FT /note="Similar to Bacillus stearothermophilus FT dihydrolipoamide dehydrogenase PdhD SWALL:DLD1_BACST FT (SWALL:P11959) (470 aa) fasta scores: E(): 1.3e-51, 36.94% FT id in 452 aa, and to Bacteroides thetaiotaomicron FT dihydrolipoamide dehydrogenase BT3186 SWALL:AAO78292 FT (EMBL:AE016939) (447 aa) fasta scores: E(): 6.7e-141, FT 86.13% id in 447 aa, and to Bacteroides thetaiotaomicron FT dihydrolipoamide dehydrogenase BT0309 SWALL:AAO75416 FT (EMBL:AE016927) (447 aa) fasta scores: E(): 6.5e-94, 57.87% FT id in 451 aa" FT /db_xref="GOA:Q5LJ74" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR006258" FT /db_xref="InterPro:IPR012999" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016156" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:Q5LJ74" FT /protein_id="CAH05802.1" FT /translation="MKYQVIIIGGGPAGYTAAEAAGKAGLSVLLFEKQNLGGVCLNEGC FT IPTKTLLYSAKTYDGAKHASKYAVTVPEVFFDLPKIIARKSKVVRKLVLGVKSKLTSNN FT VTIISGEATILDKNTVRCGEETYECDNLILCTGSETFIPPIPGIDSVNYWTHREALDNK FT ELPASLAIVGGGVIGMEFASFFNSLGVKVTVIEMMDEILGGMDKELSALLRADYAKRGI FT QFLLSTKVVSLAQTEEGAVVSYENAEGAGSVIAEKLLMSVGRRPVTKGFGLENLNLQRT FT ERGSIVVNGQMESSLPGVYVCGDLTGFSLLAHTAVREAEVAVHAILGKEDRMSYAAIPG FT VVYTNPEIAGVGQTEESLTAKGIAYRAVKLPMAYSGRFVAENEGVNGVCKVLLGEDDTI FT LGAHVLGNPASEIITLAGMAVEMKLKAAEWKKIVFPHPTVAEIFREAL" FT misc_feature 27843..27902 FT /note="Signal peptide predicted for BF0023 by SignalP 2.0 FT HMM (Signal peptide probability 0.622) with cleavage site FT probability 0.431 between residues 20 and 21" FT misc_feature 27852..28784 FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 327.0, E-value FT 1.9e-95" FT misc_feature 27951..27983 FT /note="PS00076 Pyridine nucleotide-disulphide FT oxidoreductases class-I active site." FT misc_feature 28854..29183 FT /note="Pfam match to entry PF02852 pyr_redox_dim, Pyridine FT nucleotide-disulphide oxidoreductase, dimerisation domain, FT score 111.1, E-value 1.8e-30" FT CDS 29290..30699 FT /transl_table=11 FT /gene="dacB" FT /locus_tag="BF9343_0024" FT /old_locus_tag="BF0024" FT /product="putative exported D-alanyl-D-alanine FT carboxypeptidase penicillin-binding protein" FT /EC_number="3.4.16.4" FT /note="Similar to Escherichia coli penicillin-binding FT protein 4 precursor DacB or B3182 SWALL:PBP4_ECOLI FT (SWALL:P24228) (477 aa) fasta scores: E(): 2.9e-24, 25.95% FT id in 470 aa, and to Bacteroides thetaiotaomicron FT penicillin-binding protein, D-alanyl-D-alanine FT carboxypeptidase BT3187 SWALL:AAO78293 (EMBL:AE016939) (468 FT aa) fasta scores: E(): 3.4e-131, 68.87% id in 469 aa, and FT to Shewanella oneidensis penicillin-binding protein 4 DacB FT or SO2394 SWALL:Q8EEI8 (EMBL:AE015680) (507 aa) fasta FT scores: E(): 8.2e-25, 25.81% id in 461 aa" FT /db_xref="GOA:Q5LJ73" FT /db_xref="InterPro:IPR000667" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:Q5LJ73" FT /protein_id="CAH05803.1" FT /translation="MKKLNLFILFSFCFSIITWGQANFAAIDSLIKKELPQGSEVGISV FT YDLTARKTLYTYRDTKLSRPASTMKLLTTITALARSDADEPFRTEVWYKGTIEHDTLRG FT DIYVVGGFDPEFNDEGMNALVEEVITFPFSVLKGNIYGDISMKDSLYWGSGWAWDDTPS FT SFQPYLSPLMYHKGMVKVTAVPGATRGDSARLSFEPSSSYYTMTNETKTRTSSAGKFSV FT SRGWLENKNNLIVSGNVENRRIGDVNVYSSQDFFMHTFVERLRNKGIEISNHYAFDSFR FT SDSLSICMARWECPAQDVIDQIMKESDNLSAEALLCRLGARATGKKQVSAKDGIEEIYR FT LIQDLGHDPDNYKIADGCGLSNYDYLSPALLVDFLKFAYSRTDIFRKLYKALPVAGIDG FT TLKNRMKQGAAFKNVHAKTGSYTAINTLAGYLKMANGHQVAFAIMNQNILSAAKARNFQ FT NKVCEILANHQ" FT misc_feature 29290..29364 FT /note="Signal peptide predicted for BF0024 by SignalP 2.0 FT HMM (Signal peptide probability 0.994) with cleavage site FT probability 0.745 between residues 25 and 26" FT misc_feature 29482..30627 FT /note="Pfam match to entry PF02113 Peptidase_S13, FT D-Ala-D-Ala carboxypeptidase 3 (S13) family, score 133.5, FT E-value 3.4e-37" FT CDS complement(30775..32274) FT /transl_table=11 FT /locus_tag="BF9343_0025" FT /old_locus_tag="BF0025" FT /product="putative CoA transferase" FT /EC_number="2.8.3.-" FT /note="Similar to Clostridium kluyveri FT succinyl-CoA:coenzyme A transferase Cat1 SWALL:CAT1_CLOKL FT (SWALL:P38946) (538 aa) fasta scores: E(): 7.1e-84, 47.03% FT id in 489 aa, and to Bacteroides thetaiotaomicron putative FT coenzyme A transferase BT3193 SWALL:AAO78299 FT (EMBL:AE016939) (499 aa) fasta scores: E(): 1.1e-180, FT 92.58% id in 499 aa, and to Escherichia coli hypothetical FT protein Ygfh or B2920 SWALL:YGFH_ECOLI (SWALL:P52043) (492 FT aa) fasta scores: E(): 3.7e-92, 48.96% id in 484 aa" FT /db_xref="GOA:Q5LJ72" FT /db_xref="InterPro:IPR003702" FT /db_xref="InterPro:IPR006472" FT /db_xref="InterPro:IPR017821" FT /db_xref="UniProtKB/TrEMBL:Q5LJ72" FT /protein_id="CAH05804.1" FT /translation="MAFKSISAAEAASLVKHGYNIGLSGFTPAGTAKAVTSEIAKIAEA FT EHAKGNPFQIGIFTGASTGDSCDGILSRVKAIRYRAPYTTNPDFRKAVNNGEIAYNDIH FT LSQMAQEVRYGFMGKVNVAIIEACEVTPDGKIYLTAAGGIAPTVCRLADQIIVELNSAH FT SKNMMGMHDVYEPLDPPYRREIPIYKPSDRIGLPYIQVDPKKIVGIVETNWPDEARSFA FT AADPITDKIGQNVADFLAADMKRGIIPSTFLPLQSGVGNIANAVLGALGRDQTIPAFEM FT YTEVIQNSVIGLIREGRVKFGSACSLTVTNDCLQGIYDDMDFFRDKLILRPSEISNSPE FT VVRRLGIISINTAIEADIYGNVNSTHIGGTKMMNGIGGSGDFTRNAYISIFTCPSVAKE FT GKISSIVPMVSHLDHSEHSVNIVITEQGVADLRGKSPKERAQAIIENCAHPDYKQILWD FT YLKLAGNKSQTPHAIQAALGMHAELAKSGDMKNVNWAEYER" FT misc_feature complement(30808..32274) FT /note="Pfam match to entry PF02550 AcetylCoA_hydro, FT Acetyl-CoA hydrolase/transferase, score 520.5, E-value FT 1.1e-153" FT CDS complement(32311..32640) FT /transl_table=11 FT /locus_tag="BF9343_0026" FT /old_locus_tag="BF0026" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ71" FT /protein_id="CAH05805.1" FT /translation="MDDIVKVLVIMAAFALPLIRQIKKSKTERSAQKPFVPIPDTEEPE FT VLKVTRKYQPLHSQPTSQKVEVKKNKTVSQKIETTPANDPEFTIHSAEEARKAIIWSEI FT LNRKY" FT CDS 32971..34344 FT /transl_table=11 FT /locus_tag="BF9343_0027" FT /old_locus_tag="BF0027" FT /product="putative SAM/TRAM family methylase protein" FT /note="Similar to Salmonella typhimurium protein MiaB FT (methylthiolation of isopentenylated a37 derivatives in FT rRNA) or STM0670 SWALL:Q9RCI2 (EMBL:AJ249116) (474 aa) FT fasta scores: E(): 1.6e-62, 42.15% id in 446 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT3195 SWALL:AAO78301 (EMBL:AE016939) (455 aa) fasta FT scores: E(): 4.1e-173, 95.16% id in 455 aa, and to FT Chlorobium tepidum hypothetical protein CT1993 SWALL:Q8KB05 FT (EMBL:AE012950) (444 aa) fasta scores: E(): 8.3e-82, 50% id FT in 438 aa" FT /db_xref="GOA:Q5LJ70" FT /db_xref="InterPro:IPR002792" FT /db_xref="InterPro:IPR005839" FT /db_xref="InterPro:IPR006463" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013848" FT /db_xref="InterPro:IPR020612" FT /db_xref="InterPro:IPR023404" FT /db_xref="InterPro:IPR023970" FT /db_xref="UniProtKB/Swiss-Prot:Q5LJ70" FT /protein_id="CAH05806.1" FT /translation="MNELTGADFKSATADDNKKLFIETYGCQMNVADSEVIASVMQMAG FT YSVAETLEEADAVFMNTCSIRDNAEQKILNRLEFFHSMKKKKKHLIVGVLGCMAERVKD FT DLIEHHHVDLVVGPDAYLTLPELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISG FT FVSIMRGCNNFCTYCIVPYTRGRERSRDVESILNEVADLVSKGYKEITLLGQNVNSYRF FT EKEGGEVVTFPMLLRLVAEAAPGIRVRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQ FT SGSSRILKLMNRKYTREWYLDRVAAIKRIVPDCGLTTDIFSGFHSETEEDHRESLSLME FT ACGYDAAFMFKYSERPGTYASKHLEDNVPEEIKVRRLNEIIALQNRLSAESNNRCIGKT FT YEVLVEGVSKRSRDQLFGRTEQNRVVVFDRGTHRIGDFVNVRITEASSATLKGEEVFS" FT misc_feature 33025..33321 FT /note="Pfam match to entry PF00919 UPF0004, Uncharacterized FT protein family UPF0004, score 153.2, E-value 3.9e-43" FT misc_feature 33463..33525 FT /note="PS01278 Uncharacterized protein family UPF0004 FT signature." FT misc_feature 33463..33987 FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 106.1, E-value 5.9e-29" FT misc_feature 34147..34338 FT /note="Pfam match to entry PF01938 TRAM, TRAM domain, score FT 59.9, E-value 4.7e-15" FT CDS 34462..35880 FT /transl_table=11 FT /locus_tag="BF9343_0028" FT /old_locus_tag="BF0028" FT /product="putative alpha-L-fucosidase protein" FT /note="Similar to Bacteroides thetaiotaomicron FT alpha-L-fucosidase precursor BT2970 SWALL:AAO78076 FT (EMBL:AE016938) (484 aa) fasta scores: E(): 3.1e-164, FT 77.94% id in 476 aa, and to Bacteroides thetaiotaomicron FT alpha-L-fucosidase precursor BT1842 SWALL:AAO76949 FT (EMBL:AE016933) (438 aa) fasta scores: E(): 5.6e-32, 29.63% FT id in 469 aa, and to Streptomyces coelicolor putative FT glycosyl hydrolase SCO0279 or SCF85.07 SWALL:Q9S2D4 FT (EMBL:AL939104) (423 aa) fasta scores: E(): 4.8e-20, 28.46% FT id in 383 aa" FT /db_xref="GOA:Q5LJ69" FT /db_xref="InterPro:IPR000933" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR016286" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LJ69" FT /protein_id="CAH05807.1" FT /translation="MKNKLFILFAFCISVHVYAQQPSREIPLKYGATNIGKRQDDAMKR FT FRNNRLGEFIHWGLYAIPGGEWKGKVYNGAAEWLKSWAKVPAADWLELMKQWNPVKFDA FT RQWARMAKEMGVKYVKITTKHHEGFCLWPSQYSQYTVAQTPYRKDILGELVKAYNDEGI FT DVHFYFSVMDWSHPDYRYEITSKEDSIAFSRFLTFTDHQLKELATRYPTVKDFWFDGTW FT DASIKKNGWWTAHAEQMLKELVPGVTVNSRLRADDYGKRHFDSNGRLMGDYESGYERRL FT PDPVKDLQVTKWDWEACMTVPENQWGYHKDWSLSYVKTPIEVIDRIVHAVSMGGNMVVN FT FGPQPDGDFRSEEKELAMALGCWMKRYGECIYGCDYAGWDKQDWGYYTRKGQEVYMVVF FT NRPYSGLLKVKVPKGTEIERAVLPDGQVVKVTETARNEYNVAMPSQDPGEPFIIKLQVK FT EASGAADGYRDALT" FT misc_feature 34462..34518 FT /note="Signal peptide predicted for BF0028 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.998 between residues 19 and 20" FT misc_feature 34474..35697 FT /note="Pfam match to entry PF01120 Alpha_L_fucos, FT Alpha-L-fucosidase, score -6.0, E-value 2.2e-12" FT CDS 35936..38050 FT /transl_table=11 FT /locus_tag="BF9343_0029" FT /old_locus_tag="BF0029" FT /product="putative beta-galactosidase" FT /EC_number="3.2.1.23" FT /note="Similar to Thermoanaerobacter thermosulfurogenes FT beta-galactosidase LacZ SWALL:BGAL_THETU (SWALL:P26257) FT (716 aa) fasta scores: E(): 5.1e-27, 27.75% id in 490 aa, FT and to Bacteroides thetaiotaomicron beta-galactosidase FT BT2969 SWALL:AAO78075 (EMBL:AE016938) (702 aa) fasta FT scores: E(): 0, 78.77% id in 702 aa, and to Bacteroides FT thetaiotaomicron beta-galactosidase BT0757 SWALL:AAO75864 FT (EMBL:AE016929) (682 aa) fasta scores: E(): 5e-77, 38.35% FT id in 691 aa" FT /db_xref="GOA:Q5LJ68" FT /db_xref="InterPro:IPR006101" FT /db_xref="InterPro:IPR006102" FT /db_xref="InterPro:IPR006103" FT /db_xref="InterPro:IPR006104" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013812" FT /db_xref="InterPro:IPR017853" FT /db_xref="PDB:3FN9" FT /db_xref="UniProtKB/TrEMBL:Q5LJ68" FT /protein_id="CAH05808.1" FT /translation="MRKLSYLIIVCLCLCSGVIPLMARQVTAFNTGWQFKKGPFATDPM FT RAASQWDGKWETVEIPHTWNAMDMQVQSGSFYEGAGYYRKTQFFPHDLEGKRVFLRFEG FT VGACAEVYVNGKLAGTHKGGYSAFACEIGTALKLGAENEIIVKADNKARPDVIPVNQNL FT FGVYGGIYRPVWLIVTEQNNITVTDCASPGVYITQKDVSKKSADITVKVKLDNAGLQPA FT AVTLENTIYTQEGQKVGTHSRSFDLSPQGTQTYLSTFKLKNPHLWQGRKDPYLYKVVCR FT LMADGKVIDEVVQPLGVRKYEIVAGKGFFLNGEKYSMYGVTRHQDWWGLGSALKNEHHD FT FDLAAIMDVGATTVRFAHYQQSDYLYSRCDTLGLIIWAEIPCVNRVTGYETENAQSQLR FT ELIRQSFNHPSIYVWGLHNEVYQPHEYTAALTRSLHDLAKTEDPDRYTVSVNGYGHMDH FT PVNLNADIQGMNRYFGWYEKKIQDIKPWVEQLEKDYPYQKLMLTEYGADANLAHQTEYL FT GDALNWGKPFYPETFQTKTHEYQWSIIKDHPYIIASYLWNMFDFAVPMWTRGGVPARNM FT KGLITFDRKTKKDSYFWYKANWSEEPVLYLTQRRNADREKRTTAVTVYSNIGTPKVYLN FT GQELSGIRNGYTDVHYVFDNVSLADGKNILKAVVSTKGKEYTDEIEWNYSGEKNREIDS FT YENKNEHSGF" FT misc_feature 35948..36016 FT /note="1 probable transmembrane helix predicted for BF0029 FT by TMHMM2.0 at aa 5-27" FT misc_feature 36029..36475 FT /note="Pfam match to entry PF02837 Glyco_hydro_2_N, FT Glycosyl hydrolases family 2, sugar binding domain, score FT -22.1, E-value 3.8e-06" FT misc_feature 36266..36301 FT /note="Pfam match to entry PF04566 RNA_pol_Rpb2_4, RNA FT polymerase Rpb2, domain 4, score 13.0, E-value 0.0016" FT misc_feature 36515..36832 FT /note="Pfam match to entry PF00703 Glyco_hydro_2, Glycosyl FT hydrolases family 2, immunoglobulin-like beta-sandwich FT domain, score 18.2, E-value 8.2e-05" FT misc_feature 36845..37744 FT /note="Pfam match to entry PF02836 Glyco_hydro_2_C, FT Glycosyl hydrolases family 2, TIM barrel domain, score FT -26.2, E-value 2.4e-10" FT CDS complement(38442..40181) FT /transl_table=11 FT /locus_tag="BF9343_0030" FT /old_locus_tag="BF0030" FT /product="putative AraC family/two component family FT regulatory protein" FT /note="Similar to C-terminus of Prevotella bryantii two FT component regulatory protein XynR SWALL:Q8GBY6 FT (EMBL:AJ428204) (834 aa) fasta scores: E(): 1.6e-17, 22.48% FT id in 627 aa, and to C-terminus of Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase/response regulator, hybrid BT3738 SWALL:AAO78843 FT (EMBL:AE016942) (1330 aa) fasta scores: E(): 4.8e-21, FT 26.69% id in 562 aa, and to C-terminus of Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase/response regulator, hybrid BT1734 SWALL:AAO76841 FT (EMBL:AE016933) (1346 aa) fasta scores: E(): 5.7e-21, FT 26.95% id in 564 aa" FT /db_xref="GOA:Q5LJ67" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:Q5LJ67" FT /protein_id="CAH05809.1" FT /translation="MKSILTFLLIILMDIQLNYACPCSPTNTFIEMNESFASQFQTATI FT IPMFLWQSSWSYPIEGLAIGLLISLIVYYRMVYSTKLFPHEKLRLILNITHKTQTPLTL FT IHHLLEEIISDSLSESTSQKIKRILGYTSHIMSCYQNIAVFDDKENELHPGSSPIEFEL FT YTFITSIVNQCRAYADTRQIKLNINKDFSYISCRMDEITMTAALQCLLNKMIEATPCKG FT CINMDVSHSIKHWNLQITNGPECRQSHKKILSFISTFMLIHYCGSLQIIKKIIRLHGGK FT LIGSYHGRSITLRVTVPINGYCNTIQCPEVVPPVMKDDKIIRPDKKQHHILLVMADTEL FT SNYLHKAFSILFRITILENPEQILHFSGDRLPDIIVIDETVNGIRGKEICSKIKSNTSM FT VHIPVILLISNNDNGSYLAHADCGVDKLEPRAINICRLKMDIQILINKHERIMKLLEKN FT LSDNLPSPTAKSEEDTLFINKVNKLLEKNLSTESYTVDMLSADMGMCRTKFYTKIKEIT FT DKTPTEYMHYFKMNKAKILLVTQQYTVTEIATFLGFCNAKYFGKRFKKFYKVPPTQYIK FT EVF" FT misc_feature complement(38454..38585) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 33.6, E-value 3.8e-07" FT misc_feature complement(38469..38597) FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature complement(38604..38744) FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 24.2, E-value 0.00025" FT CDS 41125..42360 FT /transl_table=11 FT /locus_tag="BF9343_0031" FT /old_locus_tag="BF0031" FT /product="hypothetical transmembrane protein" FT /note="no significant database matches" FT /db_xref="GOA:Q5LJ66" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:Q5LJ66" FT /protein_id="CAH05810.1" FT /translation="MQKQTVMKRSRLFLWILGILMQAFLISMHFYQRNMEAMYTETEYL FT LKEVLNEELHRKQLELNMFYVSRIVVDTVPLTIRVTTSEGVKTYTVDLQKSKKNISQSM FT AERSWHSIVCMKSCLSTDSLQQLWNERLKKSKIFANTDIHISITHLDNTTSYFKCKTCD FT DLCFGTHKITFYVGNRCEIEITAFWSYLWQAIYQYNSTPFEVIGIVAAVLIIIFCSWYL FT TKRYISKIRNDRRRLANDRDRERKVRMQLEKDQKRLEVKQKEYERRIKDLSLKGEEREE FT ERKSMEKILKEYKMQIQKLKELRESGKEPLLYILSSKVTFDSYAKLLICGDQSISLTSQ FT ACQLLDTFLNAPEYILTYEELLECLWKDGSGDMIRLRVAISRLRIVLSVDPEISIFQKD FT INKYQLVLPEKG" FT misc_feature order(41158..41217,41722..41790) FT /note="2 probable transmembrane helices predicted for FT BF0031 by TMHMM2.0 at aa 12-31 and 200-222" FT CDS 42396..42704 FT /transl_table=11 FT /locus_tag="BF9343_0032" FT /old_locus_tag="BF0032" FT /product="hypothetical transmembrane protein" FT /note="no significant database matches" FT /db_xref="GOA:Q5LJ65" FT /db_xref="UniProtKB/TrEMBL:Q5LJ65" FT /protein_id="CAH05811.1" FT /translation="MYYMIFYWLIAFNFGVNNLNLYFMKMKNYLKAAFLLVAIVSVWVL FT KPIEKSQDADPLLLQNVEALASGEDSSQTHCYGRGSVDCPVSHDKVDVVYDSYSLGE" FT misc_feature order(42405..42458,42477..42530) FT /note="2 probable transmembrane helices predicted for FT BF0032 by TMHMM2.0 at aa 4-21 and 28-45" FT CDS 42808..43740 FT /transl_table=11 FT /locus_tag="BF9343_0033" FT /old_locus_tag="BF0033" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LJ64" FT /protein_id="CAH05812.1" FT /translation="MGKYISILILIETILLGCHSTKEKIEFSNRVICSDSISRELVVLN FT DTFLFSYPLQIECIDSMLLVLDNVNNNFFHLFTLKGVPIKSFGEKGQGPIDFINVESFN FT LSEDRETMYAYDTSLRKIVKYDVSSFLKDSLKSEVIQVNYDSLPQAEVPTIVYDMLSLK FT DSNFLVKANHKGLRFGLLKDGKITQLYNSFSDCVNTNDDEEVWSVFCSNTKTKLRPDRT FT KMLNATYLGGVLELFDLDDNCSLSLAKILYIYEPKYGIAEGAIPKYVVFNETTQIGRSF FT TCHWSDNPITIGWSLIKHTSMAGFFSKKQ" FT CDS 43795..43956 FT /transl_table=11 FT /locus_tag="BF9343_0034" FT /old_locus_tag="BF0034" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ63" FT /protein_id="CAH05813.1" FT /translation="MFNLCNIFQFIILNAPDYTVSDEDIIKFIWKGETSIQINTFCSAG FT NKLGKRLE" FT CDS 44128..44355 FT /transl_table=11 FT /locus_tag="BF9343_0035" FT /old_locus_tag="BF0035" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ62" FT /protein_id="CAH05814.1" FT /translation="MKNYMKLIFGLIVLIGYWPTTKIPKRVNSLFLQNVEALAGSEHVT FT NLGCLGDGSVDCPINHIKVEHVVQGFSLGE" FT CDS complement(44481..44669) FT /transl_table=11 FT /locus_tag="BF9343_0036" FT /old_locus_tag="BF0036" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ61" FT /protein_id="CAH05815.1" FT /translation="MTTVKMTVSLIIINLVATSYSIRTRMGARIFRVATSAVEKVNATF FT THSNKFFAIFVPGNLLF" FT CDS 44820..45938 FT /transl_table=11 FT /locus_tag="BF9343_0037" FT /old_locus_tag="BF0037" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0664 SWALL:AAO75771 (EMBL:AE016928) (382 aa) FT fasta scores: E(): 4.2e-06, 21.51% id in 395 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT0661 FT SWALL:AAO75768 (EMBL:AE016928) (408 aa) fasta scores: E(): FT 0.0011, 21.06% id in 394 aa" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LJ60" FT /protein_id="CAH05816.1" FT /translation="MKNILLTLLLFILFSCKSTGDKTDCEVLHVDLVERPVPTEELFSK FT ISVIPLETNDSSFLVRPVKVIIKDNGYYIVDEGVPAVFSFDEEGHLLHKIGKKGQGPGE FT YREIYDAVIKEKENAVYMLSPFGSLYVYSLDGKFIKEIKLPTRSNYQLIEELDSKYFVT FT WTLPASENENCISVISKESFNNVKEFWHVPPVLTTLNSKPFYNYEHKVYFSNPYQNEVY FT EVRTDSLRVAYRWDFGKDNLDLKEYGFTLLEDQKVEEYKLMLQCLRDSTVPYLLRHQFQ FT NKKYYYTMLTFGFRHRINLFYRKDDGKSFFFEKTAEGVLLHPLAFNEDFLTCIVFNEDF FT PNYEKVLPSEEYKKLEERLEDDNPCLIKFYFK" FT misc_feature 44820..44879 FT /note="Signal peptide predicted for BF0038 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.977 between residues 20 and 21" FT CDS 45935..46054 FT /transl_table=11 FT /locus_tag="BF9343_0038" FT /old_locus_tag="BF0038" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ59" FT /protein_id="CAH05817.1" FT /translation="MKNLILVLGCFFFLISCQQTEKERLEELVKNWNGKEVLL" FT CDS 46027..46185 FT /transl_table=11 FT /locus_tag="BF9343_0039" FT /old_locus_tag="BF0039" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ58" FT /protein_id="CAH05818.1" FT /translation="MEWEGGTIVKKVILDRWDICISVDSNDERLCLMTKETDGGEERYH FT YYCYQLN" FT CDS 46514..47653 FT /transl_table=11 FT /locus_tag="BF9343_0040" FT /old_locus_tag="BF0040" FT /product="hypothetical transmembrane protein" FT /note="no significant database matches" FT /db_xref="GOA:Q5LJ57" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:Q5LJ57" FT /protein_id="CAH05819.1" FT /translation="MTKNKLLSCVIGVIILSLLVGAYFYQRNKVAVHQQAERLFVQMLQ FT EEIERKERNLNLFHLFSESSSDTLPLKICIITEEGKKEYEVDSLKSKKNISQNLRNRSI FT HSILCEKSHLLPDSLNEHWQSMLKKDHIDTESTIHVRMENLQGKIISSSSHDGVWDTSS FT GIITSYIGNRCEIEVIGLLAFSWKTILWYHWQPFGWIVICLLLMLLFICFYYKKVNRPP FT ELKEVPYEVVVEKEVVVEKEVIREIIVEKETSPEKKAPLIKQICKVEGQLYGLRYGVVF FT DSQNRVLNCNGKKMSLSPQQCQILKLFLDAPDYTVTDEDIIKFIWKGQSNVQINTFCSA FT GNKLGKRLEQAGCGVCFRRFGSDRYRMLFIDDLVDNDLT" FT misc_feature order(46532..46591,47084..47152) FT /note="2 probable transmembrane helices predicted for FT BF0040 by TMHMM2.0 at aa 7-26 and 191-213" FT CDS 47735..47968 FT /transl_table=11 FT /locus_tag="BF9343_0041" FT /old_locus_tag="BF0041" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ56" FT /protein_id="CAH05820.1" FT /translation="MKNYMKLIFGLGLIALVGYWPAAKTPKRVNSLFLQNVEALAGSEH FT VTNLGCLGDGSVDCPINHIKVEYVVQGFSLGE" FT misc_feature 47753..47803 FT /note="1 probable transmembrane helix predicted for BF0041 FT by TMHMM2.0 at aa 7-23" FT CDS 47969..48088 FT /transl_table=11 FT /locus_tag="BF9343_0042" FT /old_locus_tag="BF0042" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ55" FT /protein_id="CAH05821.1" FT /translation="MLFYINLITLESFIALLTWVRKGVDDLRPGKVLESFTPG" FT CDS 48234..48500 FT /transl_table=11 FT /locus_tag="BF9343_0043" FT /old_locus_tag="BF0043" FT /product="hypothetical exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ54" FT /protein_id="CAH05822.1" FT /translation="MSKKIFAALIVAVVATFAGYNIYQSQKTEKIVSDLVIANVEALAG FT DTEGGATITCSRTCSDGVGRCYKVYDKWGNCHFDGSQTYSCTC" FT misc_feature 48234..48287 FT /note="Signal peptide predicted for BF0043 by SignalP 2.0 FT HMM (Signal peptide probability 0.988) with cleavage site FT probability 0.779 between residues 18 and 19" FT CDS 48631..49749 FT /transl_table=11 FT /locus_tag="BF9343_0044" FT /old_locus_tag="BF0044" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0664 SWALL:AAO75771 (EMBL:AE016928) (382 aa) FT fasta scores: E(): 1.5e-06, 20.69% id in 401 aa" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LJ53" FT /protein_id="CAH05823.1" FT /translation="MKNISLILLLFILFSCKSTGDKTDCEVLHVDLVERPVPTEELFSK FT ISVIPLETNDSSFLVRPVKVIIKDNRYYIVDEGVPAVFSFDEEGHLLHKIGKKGQGPGE FT YREIYDAVIKEKENAVYMLSPFGSLYVYSLDGKFIKEIKLPTRANYQLIEELESKYFVT FT WTLPASENDNCISVISKESSKNVKEFWHVPPVLTTLNSKPFYNYEHKIYFSNPYQNEVY FT EVRTDSLRVAYRWDFGKDNLDLKEYGFTLLEDKKVEEYKLMLQYLRDSTVPYFLCDQYQ FT NDKFYYIMLVFGLKHSKNLFYRKEDSKSFFFEKTTEGIHFEPLAFNEDFLTCIVFNEDF FT PNYEKVLPPEEYKKLEERLEDDNPCLIKFYFK" FT misc_feature 48631..48690 FT /note="Signal peptide predicted for BF0044 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.976 between residues 20 and 21" FT CDS 49746..50615 FT /transl_table=11 FT /locus_tag="BF9343_0045" FT /old_locus_tag="BF0045" FT /product="conserved hypothetical lipoprotein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT1085 SWALL:AAO76192 (EMBL:AE016930) (131 aa) FT fasta scores: E(): 6e-08, 40.4% id in 99 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT4048 FT SWALL:AAO79153 (EMBL:AE016943) (373 aa) fasta scores: E(): FT 3.1e-06, 34.48% id in 87 aa" FT /db_xref="InterPro:IPR008962" FT /db_xref="InterPro:IPR011467" FT /db_xref="InterPro:IPR012336" FT /db_xref="UniProtKB/TrEMBL:Q5LJ52" FT /protein_id="CAH05824.1" FT /translation="MKNLILVLGCFFFLISCQQTEKEKLEELVKNWNGKEVLFPTNPSF FT TLYGKTPVDFKIPVSDYKIVTYVDSLGCSSCKLQLPKWKEFMKYADSIVGYQIPVLFFL FT HPANVREMRSVLKQNRFDYPVCMDTEDTFNKVNKFPSQLNFQTFLLDKNNHVIAIGNPV FT HNYDVRELYIHLISGGIDGDSLSNMRTVIKIEEDMVDLGSFDWRREQHITFEIHNIGNN FT NLVVYDNKTSCGCTSVEYSKEPVQPGKSLAVKVTYKADHPEHFNKTIILYCNASASPLE FT LKITGNAK" FT misc_feature 49746..49808 FT /note="Signal peptide predicted for BF0045 by SignalP 2.0 FT HMM (Signal peptide probability 0.862) with cleavage site FT probability 0.205 between residues 21 and 22" FT misc_feature 49764..49796 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 50660..50902 FT /transl_table=11 FT /locus_tag="BF9343_0046" FT /old_locus_tag="BF0046" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ51" FT /protein_id="CAH05825.1" FT /translation="MSYLSLIVAVVATFAGYNIYQSQRVESIMSDLTMANVEALAGSEI FT NDEDCVSASNRYCSVLIVTPNGNYLETYFDQKTKY" FT CDS 50970..52025 FT /transl_table=11 FT /locus_tag="BF9343_0047" FT /old_locus_tag="BF0047" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ50" FT /protein_id="CAH05826.1" FT /translation="MNKIVSFFILILVCSCSDRKEHIANILSMNSIDIKTNRINKDEVI FT ARGAFPFEMIDSLFFLFNGDPSSGALVLCESNASELGHFLQKGNGFGECITPGYIGHCN FT DTIYVSERSRTRRMTYLLSNHNDSLQYKCLEDVSPKMNSEFYYQICRLQSGLFVGARLF FT GKEHLFTLLDESLDTLTTFARVPIDIEENANNKLAPFIGHLCIDDNTVYYASNDFSYMA FT AYDILSEKEIKPVFERMYISPIIQKSANGISLDKYKHLLGFGDIRVYQNYIFATYIGKP FT DITMDQENDISALVPTHLLVFNKDGVPIVKFKFPFKIRSFVFTKSKMYLLDVDCNIESV FT DLVELWKHLPD" FT CDS 52054..53106 FT /transl_table=11 FT /locus_tag="BF9343_0048" FT /old_locus_tag="BF0048" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0659 SWALL:AAO75766 (EMBL:AE016928) (345 aa) FT fasta scores: E(): 2.9e-14, 22.64% id in 340 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LJ49" FT /protein_id="CAH05827.1" FT /translation="MNNMRFNLVVLFVILLSFYSCGREEKTVYDFPLEQSLKSDKEVSL FT NKELLAPYLMCSYDSTLCLIDWTANPMVHVYNMNTGKEMVAFGNKGMGPDDFLSISQMY FT VDMGKRSLLLYDQSLQTISSFQIDSLAQGSLSKIDCVSAPKLGMNRVYAYSDSIFYGSG FT TFESGLIAKCNQKEILNQYLPFPHTEQAVNRDVNYLLFQGDLIMKPDKKRFAYLAYECD FT LLSIQKVVNDTCLESVVHLNTYTPVFENQSTNEVSSVNVSTDSPKGFLRGVATENYVYA FT LYSGQIGKNKAIANEVYVFDWEGRAVKKVILDRWGICISVDSNDERLCLMTKETDGGEE FT RYHYYCYQLN" FT misc_feature 52054..52119 FT /note="Signal peptide predicted for BF0048 by SignalP 2.0 FT HMM (Signal peptide probability 0.861) with cleavage site FT probability 0.766 between residues 22 and 23" FT CDS complement(53115..53219) FT /transl_table=11 FT /locus_tag="BF9343_0049" FT /old_locus_tag="BF0049" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ48" FT /protein_id="CAH05828.1" FT /translation="MLLHYLYLHNSRKDPCMKKNLKDKKYISNKPVTP" FT CDS 53351..54817 FT /transl_table=11 FT /locus_tag="BF9343_0050" FT /old_locus_tag="BF0050" FT /product="hypothetical transmembrane protein" FT /note="no significant database matches" FT /db_xref="GOA:Q5LJ47" FT /db_xref="UniProtKB/TrEMBL:Q5LJ47" FT /protein_id="CAH05829.1" FT /translation="MFVFLIIFFDVFVLVVNNLIFVSKINRNGKNGFSLKYIDMKYIRL FT LLCILGIVLLAFLVSLYFFQRNRKLMHIKAEKLFTQVLKDEMKKKGEELDLFYSFSGIS FT SDTIPLTISIMTETGSRQYKVDAGKSRKNLSQISRERSLHSVICSEKQLSPMTLSQTWA FT DSLQTRHILARAAIQIVTTDLENNTLYKKSRTVNLSPELKFVVYLGERCEIEVSGFLYY FT TWWSVCRYHFFPFGMIVGIALCLIVYLIYLFRVKNRLFKIQSERWLLAEKLKRREEKLV FT ELASIRDQYAHQIEVQRSDAREKDILLKDLEQKLKECEDQIADLNKSKEKLVELASIRD FT QYAQQVEMQRSDAREKDMLLKDLEQKSKAYEGQIAELKKAKELLGTKSLVYKLSPILTF FT DAYKKILVCNEEIIPLNLQSSTLLLAFLNATDCQLTREEIEKCLSGRSRECLRTAKHRL FT SKVLQIDPSISIVQHNRDLFQLQLPEIEAL" FT misc_feature order(53354..53416,53474..53542,54038..54106) FT /note="3 probable transmembrane helices predicted for FT BF0050 by TMHMM2.0 at aa 2-22, 42-64 and 230-252" FT CDS 54894..55127 FT /transl_table=11 FT /locus_tag="BF9343_0051" FT /old_locus_tag="BF0051" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ46" FT /protein_id="CAH05830.1" FT /translation="MKKTLKVAILLIAILSMGHWMPVKQVRDLNSLSLQNVEALASGET FT PIYTSCIGTGSVDCPIQHDKVKYVSQGFSLDY" FT misc_feature 54894..54947 FT /note="Signal peptide predicted for BF0051 by SignalP 2.0 FT HMM (Signal peptide probability 0.970) with cleavage site FT probability 0.716 between residues 18 and 19" FT CDS 55360..55632 FT /transl_table=11 FT /locus_tag="BF9343_0052" FT /old_locus_tag="BF0052" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ45" FT /protein_id="CAH05831.1" FT /translation="MSKKIFAALIVAVVATFAGYNIYQSQRAEMEMSDLAMANIEALAN FT DGESSTETTWSCKGTVGTCGAKCGLCGTTIPKSKGTLTGSHKCSM" FT misc_feature 55360..55413 FT /note="Signal peptide predicted for BF0052 by SignalP 2.0 FT HMM (Signal peptide probability 0.988) with cleavage site FT probability 0.778 between residues 18 and 19" FT CDS 55722..56789 FT /transl_table=11 FT /locus_tag="BF9343_0053" FT /old_locus_tag="BF0053" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0659 SWALL:AAO75766 (EMBL:AE016928) (345 aa) FT fasta scores: E(): 3.3e-08, 23.49% id in 349 aa" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LJ44" FT /protein_id="CAH05832.1" FT /translation="MGKNFSILILIGTILLGCHSTKEKIEFSNRVICSDSISRGLVVLN FT DTFLFSYPLQMECIDSMLLVLDNVNNNFFHLFTLKGVPIKSFGEKGQGPTDFINVESFN FT LSEDRKNMYAYDTSLRKIVKYDVSSFLKDSLKSEVIQVNYDSLPQAEVPTIIYDMLSLK FT DSNFLVKANHKGLRFGLLKDRKVTQLYNSFSDCVNTNDDEEVWSVFCSNTKTKLRPDRT FT KMLNATYLGGVLELFDLDDNCSLSLAKILYIYEPKYGIAEGAIPKYVVFNETTQIGFED FT IYVTNNSIYTLLHSIGSETLPSEITVFNWEGIPITKIKTGCSLSNIAVDEKDNAIYVIA FT ENEQNAYELSCLSLN" FT CDS 56949..57383 FT /transl_table=11 FT /locus_tag="BF9343_0054" FT /old_locus_tag="BF0055" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0659 SWALL:AAO75766 (EMBL:AE016928) (345 aa) FT fasta scores: E(): 7.2e-05, 26.51% id in 132 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LJ43" FT /protein_id="CAH05833.1" FT /translation="MKPDKKRFAYLAYECDLLSIQKVVNDTCLESVVHLNTYTPLFENQ FT STNEVSSVNVSTDSPKGFLRGVATENYVYALYSGQIGKNKAIANEVYVFDWEGRAVKRV FT ILDRWGICISVDSNDERLCLMTKETDGGEERYHYYCYQLN" FT CDS 57397..57528 FT /transl_table=11 FT /locus_tag="BF9343_0055" FT /old_locus_tag="BF0056" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ42" FT /protein_id="CAH05834.1" FT /translation="MLRVCLIYFKNEIYVVFTFSMEEVALRKRDTTNKRITNHIKNM" FT CDS 57532..57783 FT /transl_table=11 FT /locus_tag="BF9343_0056" FT /old_locus_tag="BF0057" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ41" FT /protein_id="CAH05835.1" FT /translation="MSKKIFAALIVAVVATFAGYNIYKSQRAEVTMSDLAMANVEALAD FT SRESSADCTFGNVNYDQYSNTLHCSGNGTLCCKKTVAG" FT misc_feature 57532..57585 FT /note="Signal peptide predicted for BF0057 by SignalP 2.0 FT HMM (Signal peptide probability 0.987) with cleavage site FT probability 0.848 between residues 18 and 19" FT CDS 57856..59007 FT /transl_table=11 FT /locus_tag="BF9343_0057" FT /old_locus_tag="BF0058" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0664 SWALL:AAO75771 (EMBL:AE016928) (382 aa) FT fasta scores: E(): 1.3e-11, 25.24% id in 404 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT0661 FT SWALL:AAO75768 (EMBL:AE016928) (408 aa) fasta scores: E(): FT 3.3e-05, 22.16% id in 361 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT0666 SWALL:AAO75773 FT (EMBL:AE016928) (381 aa) fasta scores: E(): 5.6e-05, 23.24% FT id in 327 aa" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LJ40" FT /protein_id="CAH05836.1" FT /translation="MVTKWKITVGLLLILFCGCSQVKELHESSTIISFKEHTDVNADSI FT LELSFLKLQTKDSCLVKNVGLIRELNNCLLILDSANSNLYVFNKSGAFVNQIGQKGSGP FT GEYILLSSFFVDNNKNYIAAIDIAQDKVLYYNATDFSFLYERRLPFSTSCCLQLEDGNL FT LWNSREYTDSKLSDFYFVVTDSLFDIIDYKMNKEFKSGYTTGPSQMIYKVGTNVFAYTP FT FDLTIYRVGTSEIVPAHSFSFEGTDIPSLDFLNKTSNQGNSNYLYDLIQSDYISYYCVE FT ETERDLFVCYMKNKEKYIGLYDKNTDRTYNYPIKIFQDQLKVGELNYFSIGSVDDYHVA FT PLDVLSLKDMAGNGYVFDDKLSELLTISNEEDNSILLFVRIKK" FT misc_feature 57856..57921 FT /note="Signal peptide predicted for BF0058 by SignalP 2.0 FT HMM (Signal peptide probability 0.984) with cleavage site FT probability 0.965 between residues 22 and 23" FT CDS 59016..59885 FT /transl_table=11 FT /locus_tag="BF9343_0058" FT /old_locus_tag="BF0059" FT /product="putative lipoprotein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT1085 SWALL:AAO76192 (EMBL:AE016930) (131 aa) FT fasta scores: E(): 2.5e-10, 48.95% id in 96 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT4048 FT SWALL:AAO79153 (EMBL:AE016943) (373 aa) fasta scores: E(): FT 6.3e-05, 27.61% id in 105 aa" FT /db_xref="InterPro:IPR008962" FT /db_xref="InterPro:IPR011467" FT /db_xref="InterPro:IPR012336" FT /db_xref="UniProtKB/TrEMBL:Q5LJ39" FT /protein_id="CAH05837.1" FT /translation="MKSGLICCLMLCILLVGCEGKKVKGIKNMVDSWMGREILFPNSVS FT CMALKESNLGLIERRTDYTIVSYIDSSGCTACKMQLRKWMEVINCFDSLNTNVKFLFYL FT HPKEPKEITYLLKRDGFEYPVFVDRLDSFNILNHFSTDINFCTFLLDKTNRVIAIGNPL FT YSKKVKDLYKGIVLKRKEVTVSGILQTETTLPKSSIDMGSFSSEKSQSCIFTLYNIGKN FT MLVIDDAVTSCGCTSVEYSKEPVSPGKSLDIIVTYKADHPEHFNKTITVYCNSSVSPLR FT LKIMGNAK" FT misc_feature 59016..59066 FT /note="Signal peptide predicted for BF0059 by SignalP 2.0 FT HMM (Signal peptide probability 0.652) with cleavage site FT probability 0.547 between residues 17 and 18" FT misc_feature 59037..59069 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 59928..60293 FT /transl_table=11 FT /locus_tag="BF9343_0059" FT /old_locus_tag="BF0060" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ38" FT /protein_id="CAH05838.1" FT /translation="MRKKLVLSVMGILLILGTVTNVMFTRAEKSSDRAWLASIEALEAL FT AEDEIGGSPGGCGTAVGTVLEEQECNGRKVLSRYLVKFSCTGSRTGVCQSGTIYYFYDC FT YGAQIAENDFTRSIPCQ" FT misc_feature 59928..59990 FT /note="Signal peptide predicted for BF0060 by SignalP 2.0 FT HMM (Signal peptide probability 0.987) with cleavage site FT probability 0.339 between residues 21 and 22" FT CDS 60262..61524 FT /transl_table=11 FT /locus_tag="BF9343_0060" FT /old_locus_tag="BF0061" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0664 SWALL:AAO75771 (EMBL:AE016928) (382 aa) FT fasta scores: E(): 1.2e-05, 22.33% id in 412 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT0661 FT SWALL:AAO75768 (EMBL:AE016928) (408 aa) fasta scores: E(): FT 1.5e-05, 31.28% id in 163 aa" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LJ37" FT /protein_id="CAH05839.1" FT /translation="MILRDQYLVNKKIAWYRIVSVLLFLSAFSSCSLVEKSKNEIYIAD FT LDSAIQKDWYLYSDVFKSVRVIPLAMDKSVLLGDVNKMQVYKGHYIVLDEEIARGVYLF FT DSKGRFIRKIGDVGSGPGEYSKPTDFTIDTKKGEIYIFDYSQKKIFKYDIASGKYLGVC FT NVEHRLNRMFFSKGYLYANIDYQLEDEPGQEHYLLQRIDFDNEGNVEMFFKVADYKKGW FT DGIALQGNMFFNLGTESALFVQDFMDTIIYVNGDQVIPYMVVKSQDWVCKTDLEILGTT FT DNPSAKGLAMMKLIQHLGAQRRAYNLSDVFVNDSVIGFSYMQGMMGTDALYDKSTGETM FT VFDRSKDDVLFGEQPSHRQIPTFLYASDRGVFYSLKPSHLPEMKYFISQGLVKDEVIGK FT NDLDSLDGDANPVLLYYEYKD" FT misc_feature 60262..60363 FT /note="Signal peptide predicted for BF0061 by SignalP 2.0 FT HMM (Signal peptide probability 0.893) with cleavage site FT probability 0.450 between residues 34 and 35" FT CDS 61508..62083 FT /transl_table=11 FT /locus_tag="BF9343_0061" FT /old_locus_tag="BF0062" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ36" FT /protein_id="CAH05840.1" FT /translation="MNIKIKIVLIGLVISNFFLLWNVVTQRIKVYDGLDRINDLKEKVD FT SCGDSFFNYIDVNSDLTFDIKPIDTLKNVQLVYCFSEYMCEECVRQDLCVLLDIQKRIG FT ADRILILTAYADNRNNHIRLSNLLRKFRYRNIDYSCLVFPKHNRTGMDQRYFYFIDKDG FT NCKYPFYPLKDHLELTQYYLGFIAKKIV" FT misc_feature 61526..61579 FT /note="1 probable transmembrane helix predicted for BF0062 FT by TMHMM2.0 at aa 7-24" FT CDS 62080..64062 FT /transl_table=11 FT /locus_tag="BF9343_0062" FT /old_locus_tag="BF0063" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3542 SWALL:AAO78648 (EMBL:AE016941) (400 aa) FT fasta scores: E(): 9.5e-13, 27.23% id in 426 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT3420 FT SWALL:AAO78526 (EMBL:AE016940) (508 aa) fasta scores: E(): FT 1.3e-10, 26.54% id in 437 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT0668 SWALL:AAO75775 FT (EMBL:AE016928) (649 aa) fasta scores: E(): 4.2e-07, 28.76% FT id in 671 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LJ35" FT /protein_id="CAH05841.1" FT /translation="MKRTEIFIATGLFCLVSSCGGRDRQVEEALSLSGNNRNELEAVLK FT HYEGDGRKLEAARFLIGNMPGSYGANPIVEQDCSAFYEAYDSLGQKYGYRVGTEWGKQV FT DSLWQNFSNRHRVRQELNYDITRMKAEDLIREIDLAFRAWVENVHSRNCSFEDFCEYIL FT PYRRQNGLLIDNARREFNKRHQGKYFVKEGKDWQQEIDSLLYEYKYLTHSGFWGTKIPI FT WNAATLEKMRHGLCAQRCWYNSLLLSSLGIPVAIDFVPAWGNRNNSHTWNVVLINGESH FT AFEAFWDNDRWKYKRIYNNRNDDELWGRFRLPKVYRYTYSNHIEGPLADVEVDKADIPE FT LFRSVKKVDVSSEYFETADVTVELTGEAPQGVKYAYLAVFGYQDWHPVQWGKVENGRAV FT FREIGKDMVYLPVYYKRGGLLPAAEPFRLRNDGTMEKLSGNEGTEEVAVRMVTGAPAYD FT QNREYLGCMKGSRIVGLLDGKSEEELCRWTDSLALQSVVRKVSARLPYRFVRLLLPSDS FT IALGELSFYTEEGRIGNVRIITPMRATGRNEVPGMITDGLGATGYRGRVAERLVDIDLG FT KEYMVSHIGMTSYLKTQLFCPDEFELRYWDNGWKTVERKQADHKGYLVFERVPRGALLM FT LKNCRWKGKTAERIFTYEKGDVKWE" FT CDS 64085..64219 FT /transl_table=11 FT /locus_tag="BF9343_0063" FT /old_locus_tag="BF0064" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ34" FT /protein_id="CAH05842.1" FT /translation="MPLLLNLLKEMPIRHFLFVILHQIRVECVLSFRGTLKYADKTNE" FT CDS 64260..65111 FT /transl_table=11 FT /locus_tag="BF9343_0064" FT /old_locus_tag="BF0065" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3209 SWALL:AAO78315 (EMBL:AE016939) FT (279 aa) fasta scores: E(): 1.3e-94, 80.64% id in 279 aa, FT and to Chlorobium tepidum hypothetical protein CT0759 FT SWALL:Q8KED0 (EMBL:AE012845) (312 aa) fasta scores: E(): FT 2.4e-17, 30.34% id in 290 aa, and to Shewanella oneidensis FT conserved domain protein SO3267 SWALL:Q8EC77 FT (EMBL:AE015763) (303 aa) fasta scores: E(): 5e-10, 28.33% FT id in 240 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LJ33" FT /protein_id="CAH05843.1" FT /translation="MKRAMTCTDFYASGEQFDLYTCEDCGFIFTQGVPVEAEIGRYYET FT PDYISHSDTKKGAMNAIYHHVRQYMLGRKARLVMKESHRKTGRILDIGTGTGYFAHTMQ FT NKGWEVEAVEKSGQARNFAREHFGLNVRPEAALKELVPGTFDVITLWHVMEHLEHLDET FT WELLRELLTEKGVLIVAVPNCSSYDAMKYGKYWAAYDVPRHLWHFTPATIQQFGSKHGF FT ILAARHPMPFDAFYVSMLTEKHKGSAYSFVKGMWTGTAAWLSAQAKKERSSSMIYVFRK FT KR" FT CDS 65111..65992 FT /transl_table=11 FT /gene="ftsX" FT /locus_tag="BF9343_0065" FT /old_locus_tag="BF0066" FT /product="putative cell division protein" FT /note="Similar to Cytophaga johnsonae cell division protein FT FtsX SWALL:Q9RB39 (EMBL:AF169967) (291 aa) fasta scores: FT E(): 1.2e-30, 34.82% id in 290 aa, and to Bacteroides FT thetaiotaomicron cell division protein FtsX BT3210 FT SWALL:AAO78316 (EMBL:AE016939) (293 aa) fasta scores: E(): FT 5.4e-91, 83.61% id in 293 aa, and to Chlorobium tepidum FT cell division protein, putative CT0315 SWALL:Q8KFL1 FT (EMBL:AE012810) (284 aa) fasta scores: E(): 2.6e-16, 29.3% FT id in 273 aa" FT /db_xref="GOA:Q5LJ32" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:Q5LJ32" FT /protein_id="CAH05844.1" FT /translation="MKSKSRNNAVSYFDMQFITSSISTTLVLLLLGLVVFFVLAANNLS FT VYVRENINFSVLISDDMKETDILKLQKRLNNEPFVKETEYISKKQALKEQTEAMGTDPQ FT EFLGYNPFTASIEIKLHSDYANSDSIAKIEKLIKRNTNIQDVLYQKDLIDAVNENIRNI FT SLVLLALAVMLTFISFALINNTIRLAIYSKRFLIHTMKLVGASWGFIRRPFLKRNIWSG FT VLAAFIADTILMGAAYWLVSYEPELIRVITPEVMLLVSGAVLVFGVVITFLCAYLSINK FT YLRMKASTLYYV" FT misc_feature order(65159..65227,65588..65656,65765..65833,65876..65944) FT /note="4 probable transmembrane helices predicted for FT BF0066 by TMHMM2.0 at aa 17-39, 160-182, 219-241 and FT 256-278" FT misc_feature 65585..65971 FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 51.0, E-value 2.2e-12" FT CDS 66033..66266 FT /transl_table=11 FT /locus_tag="BF9343_0066" FT /old_locus_tag="BF0067" FT /product="putative membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3211 SWALL:AAO78317 (EMBL:AE016939) FT (77 aa) fasta scores: E(): 1.9e-24, 83.11% id in 77 aa, and FT to Cytophaga johnsonae FJO13 SWALL:Q9RB38 (EMBL:AF169967) FT (85 aa) fasta scores: E(): 2.8e-10, 48.61% id in 72 aa, and FT to Bacteroides thetaiotaomicron hypothetical protein BT0967 FT SWALL:AAO76074 (EMBL:AE016929) (73 aa) fasta scores: E(): FT 5.3e-08, 38.8% id in 67 aa" FT /db_xref="InterPro:IPR021448" FT /db_xref="UniProtKB/TrEMBL:Q5LJ31" FT /protein_id="CAH05845.1" FT /translation="MGDKQKFAFDKTNFILLAIGMAVVILGFILMTGPSSSETVFQADI FT FSVRRIKVAPVVCFLGFIFMIYGVMRKPKTKE" FT misc_feature order(66069..66128,66171..66239) FT /note="2 probable transmembrane helices predicted for FT BF0067 by TMHMM2.0 at aa 13-32 and 47-69" FT CDS 66273..67073 FT /transl_table=11 FT /locus_tag="BF9343_0067" FT /old_locus_tag="BF0068" FT /product="putative undecaprenol kinase" FT /EC_number="2.7.1.66" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 putative undecaprenol kinase Upk or BacA or B3057 FT or Z4410 or ECS3940 SWALL:UPK_ECOLI (SWALL:P31054) (273 aa) FT fasta scores: E(): 1.7e-26, 36.56% id in 268 aa, and to FT Bacteroides thetaiotaomicron putative bacitracin resistance FT protein BT3212 SWALL:AAO78318 (EMBL:AE016939) (264 aa) FT fasta scores: E(): 2.9e-91, 88.3% id in 265 aa, and to FT Oceanobacillus iheyensis bacitracin resistance protein FT OB1199 SWALL:Q8CXK0 (EMBL:AP004597) (275 aa) fasta scores: FT E(): 2.3e-33, 41.72% id in 266 aa" FT /db_xref="GOA:Q5LJ30" FT /db_xref="InterPro:IPR003824" FT /db_xref="UniProtKB/Swiss-Prot:Q5LJ30" FT /protein_id="CAH05846.1" FT /translation="MEWFEALILGLIQGLTEYLPVSSSGHLAIGSALFGIEGEENLAFT FT IVVHVATVFSTLVILWKEIDWIFRGLFKFEMNSETRYVINILISMIPIGIVGVFFKDEV FT EAIFGSGLLIVGCMLLLTAALLSFSYYAKPRQKENISMKDAFIIGLAQACAVLPGLSRS FT GSTIATGLLLGDNKAKLAQFSFLMVIPPILGEALLDGMKMIKGEAIAGDIPTLSLIVGF FT IAAFVSGCLACKWMINIVKKGKLIYFAIYCAIVGVVTIVVSQLQ" FT misc_feature 66285..67049 FT /note="Pfam match to entry PF02673 BacA, Bacitracin FT resistance protein BacA, score 272.7, E-value 4.2e-79" FT misc_feature order(66396..66455,66516..66572,66600..66668,66705..66773, FT 66894..66962,66999..67067) FT /note="6 probable transmembrane helices predicted for FT BF0068 by TMHMM2.0 at aa 42-61, 82-100, 110-132, 145-167, FT 208-230 and 243-265" FT CDS 67081..67782 FT /transl_table=11 FT /locus_tag="BF9343_0068" FT /old_locus_tag="BF0069" FT /product="putative tRNA pseudouridine synthase" FT /note="Similar to Bacteroides thetaiotaomicron tRNA FT pseudouridine synthase B BT3213 SWALL:AAO78319 FT (EMBL:AE016939) (240 aa) fasta scores: E(): 1.6e-76, 83.33% FT id in 234 aa, and to Cytophaga johnsonae tRNA pseudouridine FT synthase B TruB SWALL:TRUB_CYTJO (SWALL:Q9RB36) (229 aa) FT fasta scores: E(): 2.7e-43, 52.94% id in 221 aa, and to FT Oryza sativa putative tRNA synthase SWALL:Q94HL3 FT (EMBL:AC079022) (525 aa) fasta scores: E(): 5.1e-31, 45.17% FT id in 228 aa. Although the similarities are to the entire FT proteins, only the N-terminal domain of the TruB family FT pseudouridylate synthase is present" FT /db_xref="GOA:Q5LJ29" FT /db_xref="InterPro:IPR002501" FT /db_xref="InterPro:IPR014780" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/Swiss-Prot:Q5LJ29" FT /protein_id="CAH05847.1" FT /translation="MNFKEGEVLYFNKPLGWTSFKVVGHARYHMCRRMKVKKLKVGHAG FT TLDPLATGVMIVCTGKATKRIEEFQYHTKEYVATIQLGATTPSYDLEHEIDATYPTEHI FT TRELVEKTLKTFVGEIQQIPPAFSACKVDGARAYDLARKGQEVELKPKLLVIDEIELLE FT CNLPEIKIRVVCSKGTYIRALARDIGEALQSGAHLTGLIRTRVGDVKLEQCLDPAKFAE FT WIDQQDVEISD" FT misc_feature 67180..67623 FT /note="Pfam match to entry PF01509 TruB_N, TruB family FT pseudouridylate synthase (N terminal domain), score 177.8, FT E-value 1.5e-50" FT CDS 67830..68888 FT /transl_table=11 FT /locus_tag="BF9343_0069" FT /old_locus_tag="BF0070" FT /product="putative S-adenosylmethionine:tRNA FT ribosyltransferase-isomerase" FT /note="Similar to Escherichia coli, Escherichia coli FT O157:H7, and Shigella flexneri S-adenosylmethionine:tRNA FT ribosyltransferase-isomerase QueA or B0405 or Z0504 or FT ECS0456 or SF0342 SWALL:QUEA_ECOLI (SWALL:P21516) (356 aa) FT fasta scores: E(): 5.2e-44, 38.46% id in 351 aa, and to FT Bacteroides thetaiotaomicron S-adenosylmethionine:tRNA FT ribosyltransferase-isomerase BT3214 SWALL:AAO78320 FT (EMBL:AE016939) (352 aa) fasta scores: E(): 5.1e-132, FT 93.46% id in 352 aa, and to Chlorobium tepidum FT S-adenosylmethionine:tRNA ribosyltransferase-isomerase FT QueA-2 or CT1316 SWALL:Q8KCU4 (EMBL:AE012891) (346 aa) FT fasta scores: E(): 7.2e-65, 49% id in 351 aa" FT /db_xref="GOA:Q5LJ28" FT /db_xref="InterPro:IPR003699" FT /db_xref="UniProtKB/Swiss-Prot:Q5LJ28" FT /protein_id="CAH05848.1" FT /translation="MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHKRTGEIEHKMFKD FT ILNYFDDKDVFVFNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRLWDVLVDPARKI FT RIGNKLYFGDDDSMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHTILNR FT PVEEEDAERFQSIFAKNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRD FT IDVEDLTKHKMDSEQMFVTEEAVKIVNRAKDLGKNVCAVGTTVMRAIESTVSTDGHLKE FT YEGWTNKFIFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYDQVMDAYHIALKEGYRF FT GTYGDAMLILDK" FT misc_feature 67830..68504 FT /note="Pfam match to entry PF02547 Queuosine_synth, FT Queuosine biosynthesis protein, score 241.2, E-value FT 1.2e-69" FT CDS 68888..69349 FT /transl_table=11 FT /locus_tag="BF9343_0070" FT /old_locus_tag="BF0071" FT /product="putative FT 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine FT pyrophosphokinase (HPPK)" FT /EC_number="2.7.6.3" FT /note="Similar to Porphyromonas gingivalis FT 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine FT pyrophosphokinase FolK SWALL:HPPK_PORGI (SWALL:O83019) (147 FT aa) fasta scores: E(): 3e-21, 49.64% id in 139 aa, and to FT Bacteroides thetaiotaomicron 2-amino-4-hydroxy-6- FT hydroxymethyldihydropteridine BT3216 SWALL:AAO78322 FT (EMBL:AE016939) (160 aa) fasta scores: E(): 3.1e-35, 66.01% FT id in 153 aa, and to the C-terminus of Streptococcus FT pneumoniae bifunctional folate synthesis protein [includes: FT dihydroneopterin aldolase suld or spr0269 SWALL:AAK99073 FT (EMBL:AE008408) (270 aa) fasta scores: E(): 3.6e-19, 42.38% FT id in 151 aa" FT /db_xref="GOA:Q5LJ27" FT /db_xref="InterPro:IPR000550" FT /db_xref="UniProtKB/TrEMBL:Q5LJ27" FT /protein_id="CAH05849.1" FT /translation="MKVYLGLGTNLGDKELNLRVALQKIEERIGKIISLSAFYATAPWG FT FQSENNFLNAAVGVETVLSPVGILESTQRIEQEIGRLHKSRDGVYSDRLIDIDLLLYGD FT KILQDESLIVPHPLMTDRKFVLEPLAEIAPDVVHPVFHKTIKELFLALS" FT misc_feature 68891..69286 FT /note="Pfam match to entry PF01288 HPPK, FT 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK), FT score 186.4, E-value 4e-53" FT CDS 69732..71024 FT /transl_table=11 FT /gene="metK" FT /gene_synonym="metX" FT /locus_tag="BF9343_0071" FT /old_locus_tag="BF0072" FT /product="putative S-adenosylmethionine synthetase" FT /EC_number="2.5.1.6" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT Escherichia coli O157:H7, and Shigella flexneri FT S-adenosylmethionine synthetase MetK or MetX or B2942 or FT c3528 or Z4287 or ECS3818 or SF2933 SWALL:METK_ECOLI FT (SWALL:P04384) (383 aa) fasta scores: E(): 1.5e-37, 52.33% FT id in 428 aa, and to Bacteroides thetaiotaomicron FT S-adenosylmethionine synthetase BT3219 SWALL:AAO78325 FT (EMBL:AE016939) (430 aa) fasta scores: E(): 2.4e-144, FT 90.93% id in 430 aa, and to Deinococcus radiodurans FT s-adenosylmethionine synthetase MetK or dr0640 FT SWALL:METK_DEIRA (SWALL:Q9RWM6) (408 aa) fasta scores: E(): FT 3.4e-50, 51.47% id in 408 aa" FT /db_xref="GOA:Q5LJ26" FT /db_xref="InterPro:IPR002133" FT /db_xref="InterPro:IPR022628" FT /db_xref="InterPro:IPR022629" FT /db_xref="InterPro:IPR022630" FT /db_xref="InterPro:IPR022631" FT /db_xref="InterPro:IPR022636" FT /db_xref="UniProtKB/Swiss-Prot:Q5LJ26" FT /protein_id="CAH05850.1" FT /translation="MGYLFTSESVSEGHPDKVADQISDAVLDKLLAYDPSSKVACETLV FT TTGQVVLAGEVKTGAYVDLQLIAREVIQKIGYTKGEYMFESNSCGVLSAIHEQSADINR FT GVEREDPMNQGAGDQGMMFGYATNETENYMPLSLDLAHRILLVLADIRREGKEMTYLRP FT DAKSQVTIEYDDNGTPVRIDTIVVSTQHDEFILPADNSAAAQLKADEEMLAVIRKDVIE FT VLMPRVIASINHPKVLALFNDHIIYHVNPTGKFVIGGPHGDTGLTGRKIIVDTYGGKGA FT HGGGAFSGKDPSKVDRSAAYAARHIAKNLVAAGVADEMLVQVSYAIGVARPINIYVNTY FT GRSNVKMSDGEIARKIDELFDLRPKAIEDRLKLRYPIYSETAAYGHMGREPQMVTKHFQ FT SRYEGDRTMEVELFTWEKLDYVDKVKAAFGL" FT misc_feature 69732..70034 FT /note="Pfam match to entry PF00438 S-AdoMet_synt, FT S-adenosylmethionine synthetase, N-terminal domain, score FT 167.5, E-value 1.9e-47" FT misc_feature 70065..70496 FT /note="Pfam match to entry PF02772 S-AdoMet_syntD2, FT S-adenosylmethionine synthetase, central domain, score FT 170.0, E-value 3.3e-48" FT misc_feature 70074..70106 FT /note="PS00376 S-adenosylmethionine synthetase signature FT 1." FT misc_feature 70500..70955 FT /note="Pfam match to entry PF02773 S-AdoMet_syntD3, FT S-adenosylmethionine synthetase, C-terminal domain, score FT 237.3, E-value 1.8e-68" FT misc_feature 70578..70604 FT /note="PS00377 S-adenosylmethionine synthetase signature FT 2." FT CDS 71156..71752 FT /transl_table=11 FT /locus_tag="BF9343_0072" FT /old_locus_tag="BF0073" FT /product="putative lysine decarboxylase" FT /note="Similar to Eikenella corrodens lysine decarboxylase FT (fragment) SWALL:Q9Z4R8 (EMBL:U89166) (183 aa) fasta FT scores: E(): 1.8e-19, 47.48% id in 139 aa, and to FT Bacteroides thetaiotaomicron putative lysine decarboxylase FT BT3224 SWALL:AAO78330 (EMBL:AE016939) (195 aa) fasta FT scores: E(): 1.3e-61, 81.53% id in 195 aa, and to Ralstonia FT solanacearum hypothetical protein RSC2087 RSC2087 or FT RS03652 SWALL:Q8XXM6 (EMBL:AL646068) (194 aa) fasta scores: FT E(): 9.5e-28, 44.44% id in 180 aa" FT /db_xref="InterPro:IPR005269" FT /db_xref="UniProtKB/TrEMBL:Q5LJ25" FT /protein_id="CAH05851.1" FT /translation="MQEMNQITSVCVYCASSTKIDQTYFDAAMKLGHLLANRHIRLING FT AGNIGLMRSVADAVLQNGGEVTGVIPHFMVDQGWHHTGLTELIEVEGMHERKRLMAEKS FT DAVIALPGGCGTLEELLEIITWKQLGLYLNPIVILNTNGFFDPLLEMLENAIEGNFMRK FT QHGDIWHVAHTPEEAVELVYSIPVWDGSIRKFAAI" FT misc_feature 71309..71710 FT /note="Pfam match to entry PF03641 Lysine_decarbox, Lysine FT decarboxylase family, score 184.2, E-value 1.8e-52" FT CDS 71749..72579 FT /transl_table=11 FT /locus_tag="BF9343_0073" FT /old_locus_tag="BF0074" FT /product="conserved hypothetical transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3225 SWALL:AAO78331 (EMBL:AE016939) (240 aa) FT fasta scores: E(): 6.2e-67, 72.72% id in 231 aa" FT /db_xref="GOA:Q5LJ24" FT /db_xref="UniProtKB/TrEMBL:Q5LJ24" FT /protein_id="CAH05852.1" FT /translation="MIFVQDSLGAQEADTVQHVISAAGAPQNTLGSRVDLQAVSETVTG FT AEGMPIPYSPRTDDGLAMILLGCFFVSAYVLARSKKFLLQQVKDFMLHRERTSIFASST FT AADMRYLLLLIVQTCVLGGVCIFNYFNDVRPALMERVSPHILLGVYVAVCLLYLLFKWI FT LYSFLGWVFFDKSKTDIWLESYSTLIYYLGFALFPFVLFLVYFDLNVTFLVSIGCVLVI FT FTKILMFYKWLKLFSCNIYGVFLLILYFCALEIVPCLIVYQGMIQLNNVLIINF" FT misc_feature order(71926..71979,72079..72138,72181..72249,72310..72366, FT 72379..72447,72466..72534) FT /note="6 probable transmembrane helices predicted for FT BF0074 by TMHMM2.0 at aa 60-77, 111-130, 145-167, 188-206, FT 211-233 and 240-262" FT CDS 72584..73336 FT /transl_table=11 FT /locus_tag="BF9343_0074" FT /old_locus_tag="BF0075" FT /product="possible uroporphyrinogen-III synthase" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3226 SWALL:AAO78332 (EMBL:AE016939) (163 aa) FT fasta scores: E(): 1e-56, 92.02% id in 163 aa, and to FT Oceanobacillus iheyensis uroporphyrinogen-III synthase FT ob2067 SWALL:Q8EPM9 (EMBL:AP004599) (252 aa) fasta scores: FT E(): 0.039, 22.31% id in 242 aa, and to Chlorobium FT vibrioforme uroporphyrinogen-III synthase hemD FT SWALL:HEM4_CHLVI (SWALL:Q59335) (246 aa) fasta scores: E(): FT 0.16, 20.23% id in 252 aa" FT /db_xref="GOA:Q5LJ23" FT /db_xref="InterPro:IPR003754" FT /db_xref="UniProtKB/TrEMBL:Q5LJ23" FT /protein_id="CAH05853.1" FT /translation="MKIKKVLVSQPKPASEKSPYYDIAEKYGVKIDFRPFIKVESVSAK FT EFRQQKVSILDHTAVIFTSRHAIDHFFHLCTELRVTIPETMKYFCVTEAVALYIQKYVQ FT YRKRKIFFGATGKIEDLIPSIVKHKTEKYLVPMSDVHNDDVRDLLDKNNIQHTECVMYR FT TVSNDFMEGEEFDYDMLVFFSPAGVSSLKKNFPDFDQKDIKIGTFGSTTAQAVRDAGLR FT LDLEAPNVKAPSMTAALDLFIKENNKGK" FT misc_feature 72617..73297 FT /note="Pfam match to entry PF02602 HEM4, FT Uroporphyrinogen-III synthase HemD, score 9.9, E-value FT 2.2e-06" FT CDS 73484..73807 FT /transl_table=11 FT /locus_tag="BF9343_0075" FT /old_locus_tag="BF0076" FT /product="possible ribonuclease P component" FT /note="Similar to Bacteroides thetaiotaomicron putative FT ribonuclease P protein component BT3227 SWALL:AAO78333 FT (EMBL:AE016939) (109 aa) fasta scores: E(): 1.3e-24, 72.89% FT id in 107 aa, and to Chlorobium tepidum ribonuclease P FT protein component RnpA or CT0004 SWALL:RNPA_CHLTE FT (SWALL:Q8KGG4) (154 aa) fasta scores: E(): 0.0019, 35.96% FT id in 114 aa, and to Escherichia coli, and Shigella FT flexneri ribonuclease p protein component RnpA or B3704 or FT SF3760 SWALL:RNPA_ECOLI (SWALL:P06277) (119 aa) fasta FT scores: E(): 0.42, 50% id in 34 aa" FT /db_xref="GOA:Q5LJ22" FT /db_xref="InterPro:IPR000100" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR020539" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:Q5LJ22" FT /protein_id="CAH05854.1" FT /translation="MFAGGSKSFSIFPLRVVYMPVENQDVQASILLSVSKKRFKRAVKR FT NRVKRQLREAYRMHKHQLLQILTDKQQQLAIAFIYLSDELTSSAEIEEKMKILLARISE FT KLV" FT misc_feature 73577..73672 FT /note="Pfam match to entry PF00825 Ribonuclease_P, FT Ribonuclease P, score 33.4, E-value 1.6e-08" FT misc_feature 73598..73642 FT /note="PS00648 Bacterial ribonuclease P protein component FT signature." FT CDS 73804..74025 FT /transl_table=11 FT /locus_tag="BF9343_0076" FT /old_locus_tag="BF0077" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3228 SWALL:AAO78334 (EMBL:AE016939) FT (91 aa) fasta scores: E(): 7e-27, 82.19% id in 73 aa, and FT to Neisseria meningitidis hypothetical protein NMA0549 or FT NMB1906 SWALL:Y549_NEIMA (SWALL:Q9JW47) (73 aa) fasta FT scores: E(): 6.6e-19, 65.75% id in 73 aa, and to FT Fusobacterium nucleatum hypothetical protein Fn0003 FT SWALL:Y003_FUSNN (SWALL:Q8RHA5) (82 aa) fasta scores: E(): FT 3.1e-16, 63.76% id in 69 aa" FT /db_xref="GOA:Q5LJ21" FT /db_xref="InterPro:IPR002696" FT /db_xref="UniProtKB/Swiss-Prot:Q5LJ21" FT /protein_id="CAH05855.1" FT /translation="MKRLLSYILLLPIYFYRACISPMTPPSCRFTPTCSQYAIEAIKKH FT GPFKGLYLAVRRILRCHPWGGSGYDPVP" FT misc_feature 73816..74019 FT /note="Pfam match to entry PF01809 DUF37, Domain of unknown FT function DUF37, score 124.6, E-value 1.6e-34" FT CDS 74032..74667 FT /transl_table=11 FT /locus_tag="BF9343_0077" FT /old_locus_tag="BF0078" FT /product="putative tatD-related DNAse protein" FT /note="Similar to Bacteroides thetaiotaomicron TatD-related FT DNAse BT3229 SWALL:AAO78335 (EMBL:AE016939) (229 aa) fasta FT scores: E(): 2.4e-29, 42.79% id in 222 aa, and to FT Shewanella oneidensis hydrolase, TatD family so1213 FT SWALL:Q8EHK8 (EMBL:AE015565) (256 aa) fasta scores: E(): FT 1.6e-13, 35.09% id in 151 aa, and to Vibrio vulnificus FT Mg-dependent DNAse VV11722 SWALL:Q8DBT5 (EMBL:AE016802) FT (265 aa) fasta scores: E(): 9.4e-10, 28.94% id in 190 aa" FT /db_xref="GOA:Q5LJ20" FT /db_xref="InterPro:IPR001130" FT /db_xref="InterPro:IPR012278" FT /db_xref="UniProtKB/TrEMBL:Q5LJ20" FT /protein_id="CAH05856.1" FT /translation="MDILDIHTHRMPVELGQAIQNCQPAEFDPLAGAYYSVGIHPWYLT FT RENLDRQWEMLLAAIQCPQVLAIGEAGLDKLVRTDYMLQQEVFEKQAMLAHEMKYPLVI FT HAVRSANEIICLRKKMKPSNPWIIHGFRGKKELALQYIREGIYVSLGEKYQEEVLWGIP FT LEYLFLETDESMIDIHCLYERAALLLEIPLCKLMQQVRQNINNVFFRQ" FT misc_feature 74032..74661 FT /note="Pfam match to entry PF01026 TatD_DNase, TatD related FT DNase, score 55.6, E-value 9.1e-14" FT CDS 74735..76027 FT /transl_table=11 FT /gene="tyrS" FT /locus_tag="BF9343_0078" FT /old_locus_tag="BF0079" FT /product="putative tyrosyl-tRNA synthetase 1" FT /EC_number="6.1.1.1" FT /note="Similar to Bacillus subtilis tyrosyl-tRNA synthetase FT 1 TyrS SWALL:SYY1_BACSU (SWALL:P22326) (422 aa) fasta FT scores: E(): 4e-72, 45.95% id in 433 aa, and to Bacteroides FT thetaiotaomicron tyrosyl-tRNA synthetase BT3230 FT SWALL:AAO78336 (EMBL:AE016939) (430 aa) fasta scores: E(): FT 3.5e-159, 92.32% id in 430 aa, and to Enterococcus faecalis FT V583 tyrosyl-tRNA synthetase TryS-2 SWALL:AAO81513 FT (EMBL:AE016952) (420 aa) fasta scores: E(): 1.1e-72, 47.77% FT id in 427 aa" FT /db_xref="GOA:Q5LJ19" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002305" FT /db_xref="InterPro:IPR002307" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR024088" FT /db_xref="InterPro:IPR024107" FT /db_xref="UniProtKB/Swiss-Prot:Q5LJ19" FT /protein_id="CAH05857.1" FT /translation="MNFVEELRWRGMVHDMMPGTEELLAKEQVTAYVGIDPTADSLHIG FT HLCGVMILRHFQRCGHKPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLA FT KFLDFESDAPNRAELVNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARD FT GLSFTEFTYQLLQGYDFLHLYETKGCKLQMGGSDQWGNITTGTELIRRTNGGEAYALTC FT PLITKADGGKFGKTESGNIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEID FT GLIAEHNEAPHLRVLQKRLAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDT FT LLAVFEGVPQFEISRDALAEGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAA FT FDQVITTADLLDEKYLLVQRGKKNYYLIIAK" FT misc_feature 74810..75712 FT /note="Pfam match to entry PF00579 tRNA-synt_1b, tRNA FT synthetases class I (W and Y), score 363.2, E-value FT 2.3e-106" FT misc_feature 74843..74875 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT CDS complement(76140..79412) FT /transl_table=11 FT /locus_tag="BF9343_0079" FT /old_locus_tag="BF0080" FT /product="putative peptidase/protease family protein" FT /note="Similar to Streptomyces coelicolor tricorn protease FT homolog 1 Tri1 or sco2549 or scc77.16C SWALL:TRI1_STRCO FT (SWALL:Q9RDE2) (1067 aa) fasta scores: E(): 4.7e-27, 23.81% FT id in 1121 aa, and to Prevotella sp. RS2 MdsD protein FT precursor SWALL:Q9L5V8 (EMBL:AF248951) (1073 aa) fasta FT scores: E(): 9.3e-177, 44.56% id in 1086 aa, and to FT Bacteroides thetaiotaomicron putative tricorn-like protease FT BT1408 SWALL:AAO76515 (EMBL:AE016931) (1102 aa) fasta FT scores: E(): 3.1e-155, 76.6% id in 1103 aa" FT /db_xref="GOA:Q5LJ18" FT /db_xref="InterPro:IPR001478" FT /db_xref="InterPro:IPR005151" FT /db_xref="InterPro:IPR011659" FT /db_xref="InterPro:IPR012393" FT /db_xref="InterPro:IPR024070" FT /db_xref="UniProtKB/TrEMBL:Q5LJ18" FT /protein_id="CAH05858.1" FT /translation="MRKLFVCIALGLTTLTGNAASPLWMRDVQISPDGTEIAFCYKGDI FT YKVSAGGGTAIQLTTQPSYECTPIWSPDSKQIAFASDRNGNFDIFVMPATGGTAQRLTT FT HSSSELPSAFTPDGKYILFSASIQDPSQSALFPTTAMTELYKVPVNGGRTEQVLGTPAE FT AVCYAPSGEFFLYQDRKGFEDEWRKHHTSSITRDIWLYDTKTGKHTNLTNHAGEDRNPV FT LSPDGKSVYLLSERKGSFNVYSFPLDNAQDLKAVTSFKTHPVRFLSMSHGGTLCYAYDG FT EIYTQKDNATPQKINIDIVRDDQDKIADLTFTNGATSGTVSPDGKQIAFIVRGEVFVTS FT TDYATTKQITHTPAREAGLTFAPDNRTLAYASERNGNWQLFLAKIARKEEANFPNATII FT EEEVLLPSATVERAYPQFSPDGKELAFIEERNRLMVINLDTKKVRQITDGSTWFSTDGN FT FDYQWSPDGKWFTLEFIGNRHDPYSDIGLVSAKGDSPITNLTNSGYMSGSPRWVLDGNA FT ILFTTERYGMRAHASWGSQNDAMLVFLNQDAFDKFRLSKEDYELQKELEKEQQKDKEKA FT SIDPKKDKKKDPQTDTEKKDEIKNILVELNGLEDRIIRLTPNSSNLGSTIISKDGETLY FT YLSAFEGGFDLWKMDLRKKETKLLHKMNAGWASMDMDKDGKSLFVLGGNTMQKMDLSGE FT TLKPINYKAEMKMDLAAEREYMFDHVYKQQQKRFYNANMHGVNWDTMSAAYRKFLPHIN FT NNYDFAELLSEWLGELNVSHTGGRFSPSIPGDATASLGVLTDWNYKGKGASIMEVIEKG FT PFDHARSKVKAGTIIEKINGQEITPETDYHTLLNDKANKKTLVSLYNPQSGERWEEVVI FT PIGNGILNNLLYKRWVKQRAADVDKWSDGRLGYVHIQSMGDDSFRSVYSDILGKYNNRE FT GIVIDTRFNGGGRLHEDIEVLFSGKKYFTQVVRGREACDMPSRRWNKPSIMLTCEANYS FT NAHGTPWVYSHQKLGKLVGMPVPGTMTSVSWERLQDPSLVFGIPVIGYRLPDGSYLENT FT QLEPDIKVANSPETIVKGEDTQLKTAVEELLKELPAGKGKKH" FT misc_feature complement(76167..77312) FT /note="Pfam match to entry PF03572 Peptidase_S41B, FT Peptidase family S41B, score 236.5, E-value 3.3e-68" FT misc_feature complement(79356..79412) FT /note="Signal peptide predicted for BF0080 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.962 between residues 19 and 20" FT tRNA 79576..79646 FT /note="tRNA Gln anticodon TTG, Cove score 47.95" FT CDS 80020..81552 FT /transl_table=11 FT /locus_tag="BF9343_0080" FT /old_locus_tag="BF0081" FT /product="putative choline-sulfatase" FT /note="Similar to Rhizobium meliloti choline-sulfatase BetC FT or r00949 or SMC00127 SWALL:BETC_RHIME (SWALL:O69787) (512 FT aa) fasta scores: E(): 2.5e-32, 31.64% id in 455 aa, and to FT Bacteroides thetaiotaomicron choline-sulfatase BT1918 FT SWALL:AAO77025 (EMBL:AE016933) (500 aa) fasta scores: E(): FT 1.2e-146, 67.36% id in 478 aa, and to Clostridium FT perfringens probable phosphonate monoester hydrolase FT CPE0231 SWALL:Q8XNV1 (EMBL:AP003186) (481 aa) fasta scores: FT E(): 8.4e-45, 37.39% id in 476 aa" FT /db_xref="GOA:Q5LJ17" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR024607" FT /db_xref="UniProtKB/TrEMBL:Q5LJ17" FT /protein_id="CAH05859.1" FT /translation="MAASPSTYAFNGESKETGNDSSKLSKAPATKGGKPHIIFIMSDQH FT RGDALHCMGNKAVISPNIDKLAQEGSLFVCGYSSAPSSTPARAGLLTGMSPWHHGMLGY FT GKVASKYKYEMPQMLRDLGYYTFGIGKMHWFPQKALHGFHATLVDESGRSETRDFISDY FT REWFQLQAPGKNPDLTGIGWNNHNAGTYKLEERLHPTAWTGQTACELIRNYDSDQPLFL FT KVSFARPHSPYDPPKRYLDMYEKVDIPVPFVGDWCGKYAERKDPERVSKDAAFANLGEE FT YAVNSRRHYYANVTFIDDQIGQIIQTLKEKGMYENAIICYTADHGDMLGDHYHWRKTYA FT YEGSAKIPYIIKWPSAMTTQAIRGKRIEQPVELRDFLPTFIELAGGTVPDDMDGKSLVA FT LASGNKNGWRKYIDLEHATCYSADNYWCALTDGKMKYIWFIHTGEEQLFDLSSDPGEQK FT NLSGNSRYADRLVEMRKAMVDHLQERGTEFVKDGKLAVRDQTLLYSPNYPKD" FT misc_feature 80122..81207 FT /note="Pfam match to entry PF00884 Sulfatase, Sulfatase, FT score 155.7, E-value 6.6e-44" FT misc_feature 80260..80298 FT /note="PS00523 Sulfatases signature 1." FT CDS 81676..82518 FT /transl_table=11 FT /locus_tag="BF9343_0081" FT /old_locus_tag="BF0082" FT /product="putative 4-deoxy-L-threo-5-hexosulose-uronate FT ketol-isomerase" FT /EC_number="5.3.1.17" FT /note="Similar to Erwinia chrysanthemi FT 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI FT SWALL:KDUI_ERWCH (SWALL:Q05529) (278 aa) fasta scores: E(): FT 3.8e-54, 49.09% id in 277 aa, and to Bacteroides FT thetaiotaomicron 4-deoxy-L-threo-5-hexosulose-uronate FT ketol-isomerase BT3231 SWALL:AAO78337 (EMBL:AE016939) (280 FT aa) fasta scores: E(): 2e-107, 91.42% id in 280 aa, and to FT Bacteroides thetaiotaomicron FT 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase BT4106 FT SWALL:AAO79211 (EMBL:AE016943) (306 aa) fasta scores: E(): FT 1e-63, 54.67% id in 289 aa, and to Yersinia pestis FT 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI FT or YPO1725 or Y1887 SWALL:Q8ZFH8 (EMBL:AJ414150) (278 aa) FT fasta scores: E(): 3.2e-56, 50.54% id in 277 aa" FT /db_xref="GOA:Q5LJ16" FT /db_xref="HSSP:1X8M" FT /db_xref="InterPro:IPR007045" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR021120" FT /db_xref="UniProtKB/Swiss-Prot:Q5LJ16" FT /protein_id="CAH05860.1" FT /translation="MKTNYEIRYAAHPEDARSYDTKRIRRDFLIEKVFSADEVNMVYSM FT YDRMVVGGAMPVKEVLKLEAIDPLKAPYFLTRREMGIFNVGGPGVVRAGDAIFQLDYKE FT ALYLGAGDRDVTFESTDAAHPAKFYFNSLAAHRNYPDKKVTKADAVVAEMGTLEGSNHR FT NINKMLVNQVLPTCQLQMGMTELAPGSVWNTMPAHVHSRRMEAYFYFEVPEEHAVCHFM FT GEVDETRHVWMKGDQAVLSPEWSIHSAAATHNYTFIWGMGGENLDYGDQDFSLITDLK" FT misc_feature 81688..82515 FT /note="Pfam match to entry PF04962 KduI, 5-keto FT 4-deoxyuronate isomerase, score 470.6, E-value 1.1e-138" FT CDS 82585..83376 FT /transl_table=11 FT /gene="gno" FT /locus_tag="BF9343_0082" FT /old_locus_tag="BF0083" FT /product="putative gluconate 5-dehydrogenase" FT /EC_number="1.1.1.69" FT /note="Similar to Escherichia coli O6 gluconate FT 5-dehydrogenase c0321 SWALL:Q8FKS4 (EMBL:AE016755) (266 aa) FT fasta scores: E(): 1.2e-71, 73.07% id in 260 aa, and to FT Streptococcus pneumoniae 5-keto-D-gluconate 5-reductase Gno FT or spr0290 SWALL:Q8DR79 (EMBL:AE008410) (271 aa) fasta FT scores: E(): 2.4e-83, 83.46% id in 260 aa, and to FT Clostridium acetobutylicum short-chain alcohol FT dehydrogenase family protein CAC2607 SWALL:Q97FW9 FT (EMBL:AE007758) (267 aa) fasta scores: E(): 4.1e-83, 84.67% FT id in 261 aa" FT /db_xref="GOA:Q5LJ15" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020904" FT /db_xref="UniProtKB/TrEMBL:Q5LJ15" FT /protein_id="CAH05861.1" FT /translation="MVNFSLEGKVAWVTGASYGIGFALATAFSEAGAKIVFNDISRELV FT DKGLAAYKELGIEARGYVCDVTSEEQVNALVAQIEKEVGVVDILVNNAGIIKRIPMCEM FT TAEQFRQVIDVDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGG FT LKMLTRNIASEYGEFNIQCNGIGPGYIATPQTAPLREVQSDGSRHPFDSFIISKTPAAR FT WGTPEDLMGPAVFLASDASNFVNGHVLYVDGGILAYIGKQP" FT misc_feature 82603..83349 FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 298.9, E-value 5.3e-87" FT misc_feature 83014..83100 FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS 83403..84647 FT /transl_table=11 FT /locus_tag="BF9343_0083" FT /old_locus_tag="BF0084" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3233 SWALL:AAO78339 (EMBL:AE016939) (414 aa) FT fasta scores: E(): 1.4e-116, 70.45% id in 413 aa" FT /db_xref="GOA:Q5LJ14" FT /db_xref="InterPro:IPR011013" FT /db_xref="UniProtKB/TrEMBL:Q5LJ14" FT /protein_id="CAH05862.1" FT /translation="MKKVFLFVAAVLLCLACNEAGRTVSVTVSNATSLERSGEMVEVSM FT GEVSSKLHLPDTAQIVVVDAEGQQVPYQITSDEKVIFPVTVQANGSAVYTIKVGIPQEC FT PVKACGRYYPERVDDVAWENDLTAFRAYGPALQETGERAFGYDIWTKYNTTEPVVEARY FT EGELNPDMKAKIAELGKTDPKAAQELYRSVSYHVDHGNGLDCYKVGPTLGGGTTALMAG FT DTIVYPYCYATQEILDNGPLRFTVKLVYNPLVVKGDSTIIETRIITLDAGSYCNKTVVS FT YTNLKETMPLAVGIVLHEPDGAIVADAANGYMTYVDPTDNAGGDNGKIFVGAAFPTLVK FT EAKAVLFPEKEKKELRGGADGHVLAISEYEPGADFTYYWGAAWSKADIKDSAAWNAYMA FT DFAQKVRNPLTVTVK" FT misc_feature 83403..83459 FT /note="Signal peptide predicted for BF0084 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.286 between residues 19 and 20" FT CDS complement(84681..85610) FT /transl_table=11 FT /locus_tag="BF9343_0084" FT /old_locus_tag="BF0085" FT /product="putative iron-sulfur cluster-binding protein" FT /note="Similar to Escherichia coli putative electron FT transport protein YjeS or B4166 SWALL:YJES_ECOLI FT (SWALL:P39288) (379 aa) fasta scores: E(): 1.6e-38, 39.35% FT id in 310 aa, and to Bacteroides thetaiotaomicron putative FT iron-sulfur cluster-binding protein BT3245 SWALL:AAO78351 FT (EMBL:AE016939) (343 aa) fasta scores: E(): 7.4e-55, 60% id FT in 340 aa, and to Pseudomonas syringae iron-sulfur FT cluster-binding protein PSPTO4948 SWALL:AAO58376 FT (EMBL:AE016873) (362 aa) fasta scores: E(): 3.4e-43, 44.07% FT id in 304 aa" FT /db_xref="GOA:Q5LJ13" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR013542" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:Q5LJ13" FT /protein_id="CAH05863.1" FT /translation="METKINSKALKAEALRLGFSACGIAPAEPIDQAHQNALKMWLDAD FT RQAGMTYMANHFDKRCDPALLVEGTRCVVSVALNYYPATRIPDEEYQFAWYAYGKDYHD FT LMREKLATLFRFIQESDVPELNGRMFCDTAPVPERYWAWRAGLGWIGKNTQLIIPHAGS FT TFFLGELFLNTEADTYDRPQPNRCGRCNRCLQACPTKALETPYSLNAHRCLSYLTIENK FT SEIPDSIAPFMGNRVYGCDECQKACPWNRFATPCRTPELQPSPEFMNMKKEDWKQLSEE FT KYRALFKGSAVKRAKYSGLIRNIRQMED" FT misc_feature complement(85002..85073) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 22.0, E-value 8.1e-05" FT misc_feature complement(85017..85052) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT CDS complement(85610..86224) FT /transl_table=11 FT /locus_tag="BF9343_0085" FT /old_locus_tag="BF0086" FT /product="putative polysaccharide deacetylase" FT /note="Similar to C-terminus of Streptococcus pneumoniae FT peptidoglycan GlcNac deacetylase PgdA SWALL:Q9K516 FT (EMBL:AJ251472) (463 aa) fasta scores: E(): 6.6e-16, 36.61% FT id in 183 aa, and to Bacteroides thetaiotaomicron FT polysaccharide deacetylase BT3246 SWALL:AAO78352 FT (EMBL:AE016939) (204 aa) fasta scores: E(): 4.7e-70, 80.39% FT id in 204 aa, and to Anabaena sp. polysaccharide FT deacetylase ALL4345 SWALL:Q8YP55 (EMBL:AP003596) (305 aa) FT fasta scores: E(): 1.7e-20, 39.47% id in 190 aa" FT /db_xref="GOA:Q5LJ12" FT /db_xref="InterPro:IPR002509" FT /db_xref="InterPro:IPR011330" FT /db_xref="UniProtKB/TrEMBL:Q5LJ12" FT /protein_id="CAH05864.1" FT /translation="MFIEQPPWFFRAIYPDAIFRMDPDEKAVYLTFDDGPIPEVTPWVL FT ELLDKHNIKATFFMVGDNIRKHPDVFRMVVERGHRIGNHTFNHIRGFEYLSSNYLANTD FT KANEMMKTDLFRPPHGHMRWMQYMTLKRHYKIIMWDLVTRDYSKKLRPPQVLANVMRYA FT RNGSIITFHDSLKSWNNGNLQYALPRAIDFLKEEGYEFRLL" FT misc_feature complement(85814..86167) FT /note="Pfam match to entry PF01522 Polysacc_deacet, FT Polysaccharide deacetylase, score 91.2, E-value 1.8e-24" FT CDS complement(86241..89600) FT /transl_table=11 FT /locus_tag="BF9343_0086" FT /old_locus_tag="BF0087" FT /product="conserved hypothetical transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3247 SWALL:AAO78353 (EMBL:AE016939) FT (1124 aa) fasta scores: E(): 0, 81.3% id in 1123 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT0968 SWALL:AAO76075 (EMBL:AE016929) (1044 aa) fasta FT scores: E(): 1.1e-128, 51.55% id in 1129 aa, and to FT Chlorobium tepidum hypothetical protein CT2009 SWALL:Q8KAY9 FT (EMBL:AE012951) (886 aa) fasta scores: E(): 9e-29, 28.85% FT id in 1050 aa, and to Homo sapiens hypothetical protein FT SWALL:AAH45556 (EMBL:BC045556) (272 aa) fasta scores: E(): FT 0.051, 27.27% id in 209 aa" FT /db_xref="GOA:Q5LJ11" FT /db_xref="InterPro:IPR021280" FT /db_xref="UniProtKB/TrEMBL:Q5LJ11" FT /protein_id="CAH05865.1" FT /translation="MKQYKTVNNLVGWITFLIAATVYCMTIEPTASFWDCPEFITTAYK FT LEVGHPPGAPFFMLTANLFTQFVSDPALVAKMVNYMSALMSGACILFLFWSITHLVRKL FT VITDETNITRGQLITVMGSGLVGALAYTFSDTFWFSAVEGEVYAYSSMFTAIVFWLILK FT WEDVADQPHSDRWIILIAYLTGLSIGVHLLNLLCLPAIVLVYYYKKVPGANAKGSLLAL FT AGSMVLVAAVLYGIVPGVVKVGGWFELLFVNSLGMPFNTGVIVYVALLAAAIIWGIYES FT YNEKSRTRMNLSFLLTIAMLGIPFYGHGASAVIIGILVLGVLAAYLFASKLNEKIRMSA FT RTMNTALLCTMMIMVGYSSYALIVIRSVANTPMDQNSPEDIFTLGEYLGREQYGTRPLF FT YGPAYSSKVALDVEDGYCVPRQKSTDTKYVRKEKTSPDEKDSYVELPGRVEYEYAQNML FT FPRMYSSAHTAYYKSWQDITGYDVPYDQCGEMLMVNMPTQWDNIKFFFSYQLNFMYWRY FT FMWNFAGRQNDIQSSGEIEHGNWITGIPFIDNLLYGDQNMLPQELKDNKGHNVFYCLPL FT ILGIIGLFWQAWRGQKGIQQFWVVFFLFFMTGIAIVLYLNQTPGQPRERDYAYAGSFYA FT FAIWIGMGVAGIVHLLRNYMKEVPAAALTSAVCLLVPIQMASQTWDDHDRSGRYVARDF FT GQNYLMSLQESGNPIIYTNGDNDTFPLWYNQETEGFRTDARTCNLSYLQTDWYIDQMKR FT PAYDSPALPITWDRTEYMEGQNEYVPIRPDFKKQIDKAYKAAEEEVLNGKNPEALNNIR FT AQFGDNPYELKNILKYWVRTKDGQAVIPTDSIVVKIDKEAVRRSGMMIPEALGDSIPDY FT MHISLKDEKGNPKRALYKSELMMLEMLANANWERPIYMAITVGTDNQLNMREHFIQEGL FT TYRFTPFDTEALGATIDSEKMYDNLMNKFKFGGIDKPGIYIDENTMRMCYTHRRIFAQL FT ITQLMKEGKKDKALAALEYAEKMIPAFNVPYDVQNGALEMAEAYYQLGNNTKADQIIDE FT LANKSVEYLTWYLSLDDNHLLMSQREFIMHLSALDMEAKMMEKYKSKLAGNYTPKVNEL FT YNIYVGRMKAHQ" FT misc_feature complement(order(87648..87716,87753..87821,87834..87893, FT 88506..88574,88617..88721,88767..88835,88878..88946, FT 89007..89075,89118..89186,89199..89267,89295..89363, FT 89376..89444,89514..89582)) FT /note="13 probable transmembrane helices predicted for FT BF0087 by TMHMM2.0 at aa 7-29, 53-75, 80-102, 112-134, FT 139-161, 176-198, 219-241, 256-278, 294-328, 343-365, FT 570-589, 594-616 and 629-651" FT repeat_region 89789..89949 FT /note="invertible region A; inactive in shotgun" FT CDS 90096..91688 FT /transl_table=11 FT /locus_tag="BF9343_0087" FT /old_locus_tag="BF0088" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LJ10" FT /protein_id="CAH05866.1" FT /translation="MNTKTKLLYVGFRALSTCCLYAAFLMITSCGDNVVNPDSPEPDGE FT DMIPVTISRVEDGSYMESHVDTPDTTGGRTLVDEWVPVKEPPASRAIPAAVPYEGPSAV FT RMTLREEPQVTTRASTLGNDIYFRLIAFRKVGSNYVFQSAADFTTNGASAPTLRLGNLL FT TRAGTVRVIGYSFNSTAGMGTIPSSYTYNSTSVTIPNMNSDFMVYDSGDIANVSTISHN FT LSVSFTQKLCKLTVKLSLSQFGSNTFTNCTGVYVSQGGNTSAWTIGPSTNNVSANTGNT FT PTFNIANNSTATVRLVPFSGSRAITVHIGTLKLSNYFNANNRNITSSQNVQLLPGKSYT FT ITLKFELGVQLAASDINLTQNGCTASDKNYLAKLRWATGNLKSTGNTNYVWTSSTDRGY FT YYTFYSTYTGNKTTNNTDPCSKLNTAYYGTGWRTPSENDYISLSRCTDKVLTNGGMWFM FT NKSIGVFLLASGGIGWGGSSSTGDPTSDGGTGGQYWSSTYNKNDAKRLVFANGSAGIGL FT DYLASGLAVRCVK" FT misc_feature 90114..90182 FT /note="1 probable transmembrane helix predicted for BF0088 FT by TMHMM2.0 at aa 7-29" FT repeat_region 91906..92066 FT /note="invertible region B; active in shotgun" FT CDS 92218..93834 FT /transl_table=11 FT /locus_tag="BF9343_0088" FT /old_locus_tag="BF0089" FT /product="hypothetical protein" FT /note="Very limited similarity to Bacteroides FT thetaiotaomicron hypothetical protein BT4606 SWALL:AAO79711 FT (EMBL:AE016945) (394 aa) fasta scores: E(): 0.039, 21.18% FT id in 321 aa" FT /db_xref="InterPro:IPR011871" FT /db_xref="UniProtKB/TrEMBL:Q5LJ09" FT /protein_id="CAH05867.1" FT /translation="MNRTFIMRECLGKALWLCFCLSIAGCAEDDRMTPLSADSGNTADE FT LIPIHISLTGDNDYHSSSFNDASTRSHSPLIAEWVGVKAFSPTRTGEQPDYEGPRIASM FT ELTEDTLPRVSTRATVPVGVYFRLIVFRKSGNNYVFQSAADYASNGTGTPVLKQGKLLT FT RSGTIRVVGYSFNTTADLGTIPASYTYNSSTVSIPDMTKDFMTFDSGDITNVNSLSHNL FT LPVSFSQKLCKLTITISPTGFPSNTITNCTGVYVKQGGNSTSWKIGPSTNVVAANTNNT FT AAFSPSTALSTTIRMVPFAGARTITVHFNTLTISGRTIPNNTEITSTQSIQLKEGKSYT FT MKIQFKKTIGINVPSGSINLTTNGCSSADKTALAKLIWADGNLKSTGSANYVWGTYSEY FT GYYYTWKSTYTGNTSLNNTDPCPKLKSDYGTGWRTPSKDEMDKLSRCTNKAVVTNGGNK FT GFWFMNSTIGLFLPFGGSHGGATGSKTTPPGNAGSEGAYWCLDANGSTYGYLLYFTTGG FT ESRTGHYPKTNGQSVRCVKNK" FT CDS 93863..94621 FT /transl_table=11 FT /locus_tag="BF9343_0089" FT /old_locus_tag="BF0090" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0003 SWALL:AAO75110 (EMBL:AE016926) (258 aa) FT fasta scores: E(): 1.3e-57, 64.65% id in 249 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LJ08" FT /protein_id="CAH05868.1" FT /translation="MKTELKGWLADNTVTTDNKEDKILVLESAGNLTLSDVLDEMKKED FT TGLRAETLKHAVDLFQRTVSELVLNGYSVNTGLFRAVPQFRGVIDGGVWNPERNSIYVS FT FNQDKDLRETIARTGVKILGAKGDPAYFIGGEDAATRATDGSATAGRNYRLQGKNIKVT FT GTDSAVGIVLIDEKGTETKLPMDMIAVNNPSEVLVLLPADLKDGVYELRLTTQFSTGNK FT LLKVPRTVIRSLVIGLPSGGDGDIVDDPTA" FT CDS complement(94794..95603) FT /transl_table=11 FT /locus_tag="BF9343_0090" FT /old_locus_tag="BF0091" FT /product="putative metal uptake system ABC transporter FT ATP-binding protein" FT /note="Similar to Listeria monocytogenes zinc uptake system FT ATP-binding protein ZurA or LMO1447 SWALL:ZURA_LISMO FT (SWALL:Q9XDA6) (257 aa) fasta scores: E(): 9e-22, 35.74% id FT in 221 aa, and to Bacteroides thetaiotaomicron putative FT metal ABC transporter, ATP-binding protein BT3248 FT SWALL:AAO78354 (EMBL:AE016939) (273 aa) fasta scores: E(): FT 6e-55, 73.89% id in 272 aa, and to Synechocystis sp. ABC FT transporter SLR2044 SWALL:P73086 (EMBL:D90903) (289 aa) FT fasta scores: E(): 1.5e-34, 38.79% id in 250 aa" FT /db_xref="GOA:Q5LJ07" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q5LJ07" FT /protein_id="CAH05869.1" FT /translation="MDKERKPHKHTEAATSSPLLSIRGLSAAYDGRTVLHDVDLEVYEH FT DFLGIIGPNGGGKTTLIKCILGLLRPTGGEIIKYHEPLTTGYLPQYNSIDRSFPISVLE FT VVLSGLSSKKSLTGRFNDRHREKARQVIHRMGLEGLEHRAIGQLSGGQLQRALLGRAII FT SDPQLLILDEPSTYIDKRFEARLYQLLAEINRDCAIILVSHDIGTVLQQVKNIACVNET FT LDYHPAASVNTEWLERNFNCPIELLGHGTLPHRVLGEHCHCHEDGKA" FT misc_feature complement(94938..95471) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 143.9, E-value 2.5e-40" FT misc_feature complement(95118..95162) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(95427..95450) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(95624..96556) FT /transl_table=11 FT /locus_tag="BF9343_0091" FT /old_locus_tag="BF0092" FT /product="putative metal ABC transporter substrate-binding FT precursor" FT /note="Similar to Streptococcus pyogenes, and Streptococcus FT pyogenes metal ABC transporter substrate-binding FT lipoprotein precursor MtsA or SPY0453 or SPYM3_0318 or FT SPS1539 SWALL:MTSA_STRPY (SWALL:Q9A157) (310 aa) fasta FT scores: E(): 1e-14, 27.11% id in 284 aa, and to Bacteroides FT thetaiotaomicron putative zinc ABC transporter, FT zinc-binding protein BT3249 SWALL:AAO78355 (EMBL:AE016939) FT (308 aa) fasta scores: E(): 1.6e-80, 75.17% id in 294 aa, FT and to Chlorobium tepidum adhesion protein, putative CT2106 FT SWALL:Q8KAQ0 (EMBL:AE012959) (344 aa) fasta scores: E(): FT 3.1e-34, 35.58% id in 281 aa" FT /db_xref="GOA:Q5LJ06" FT /db_xref="InterPro:IPR006127" FT /db_xref="InterPro:IPR006128" FT /db_xref="InterPro:IPR006129" FT /db_xref="UniProtKB/TrEMBL:Q5LJ06" FT /protein_id="CAH05870.1" FT /translation="MRMNRTHQSIVTHIPGRGMRGQTVLFLFLLLLSACSGRGKGDAGE FT RIITVTMEPQRYFTEAIAGDKFTVRSMVPKGSSPETYDPTPQQLVSLGESEAYLRIGYI FT GFERSWMDRLMNNTPHIQVFDTSTGVDLIFESAFDHGDHRHEGGVEPHIWNSTANALII FT AGNTFKALTVLDKGNEAYYKARYDSLCQRIEQTDSLIRQTLSVPGADRAFIIYHPALSY FT FARDYGLHQISIEEGGKEPSPAHLKGLMDLCKKEGVRVIFVQPEFDRRNAEIIAKQTGT FT QVISINPLSYDWEEEMLNVARSLRGEPGY" FT misc_feature complement(95642..96490) FT /note="Pfam match to entry PF01297 SBP_bac_9, Periplasmic FT solute binding protein family, score 168.3, E-value FT 1.1e-47" FT misc_feature complement(96437..96556) FT /note="Signal peptide predicted for BF0092 by SignalP 2.0 FT HMM (Signal peptide probability 0.677) with cleavage site FT probability 0.198 between residues 40 and 41" FT CDS complement(96562..97338) FT /transl_table=11 FT /locus_tag="BF9343_0092" FT /old_locus_tag="BF0093" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3250 SWALL:AAO78356 (EMBL:AE016939) FT (240 aa) fasta scores: E(): 1.5e-55, 65.73% id in 251 aa, FT and to Escherichia coli O157:H7 hypothetical protein YfcK FT or Z3587 or ECS3208 SWALL:YFCK_ECO57 (SWALL:Q8XCQ7) (668 FT aa) fasta scores: E(): 3.5e-10, 31.12% id in 241 aa, and to FT Escherichia coli O6 hypothetical protein YfcK or C2870 FT SWALL:Q8FFH0 (EMBL:AE016764) (688 aa) fasta scores: E(): FT 3.6e-10, 32.08% id in 240 aa" FT /db_xref="GOA:Q5LJ05" FT /db_xref="InterPro:IPR008471" FT /db_xref="UniProtKB/TrEMBL:Q5LJ05" FT /protein_id="CAH05871.1" FT /translation="MERIIEYTADGSATLFVPELNEHYHSVKGALTESSHIFIDMGLKA FT SASPAPHILEIGFGTGLNALLTLIEAERSGRQIHYTGIELYPLPWETVEKLRYNDRPGG FT DGEQRLTTGDEQAAQWMKALHTSPWGEDVRITPHFTLRKIQGDFTIMDRSSLITDRTSL FT FSLLYFDAFAPEKQPEMWTQELFDELYVMMEEEGILTTYCAKGVVRRMLQAAGFIVERL FT PGPPGGKREILRAKKRSQDSPAVTQCNAQPTLKQKG" FT CDS complement(97347..97823) FT /transl_table=11 FT /locus_tag="BF9343_0093" FT /old_locus_tag="BF0094" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein, putative integral membrane protein FT BT3251 SWALL:AAO78357 (EMBL:AE016939) (159 aa) fasta FT scores: E(): 4.9e-48, 78.98% id in 157 aa, and to FT Methanosarcina acetivorans hypothetical protein Ma3555 FT SWALL:Q8TK61 (EMBL:AE011064) (153 aa) fasta scores: E(): FT 2.4e-13, 33.09% id in 142 aa, and to Campylobacter jejuni FT putative integral membrane protein cj0341C SWALL:Q9PIF9 FT (EMBL:AL139074) (147 aa) fasta scores: E(): 3.7e-13, 34.32% FT id in 134 aa" FT /db_xref="GOA:Q5LJ04" FT /db_xref="InterPro:IPR015414" FT /db_xref="InterPro:IPR020143" FT /db_xref="UniProtKB/TrEMBL:Q5LJ04" FT /protein_id="CAH05872.1" FT /translation="MDAFIETVSQILIDWGYPGLFISALLAGSIVPFSSEIVLLGLVKL FT GLDPTLCLISASLGNTAGGMTCYYMGRLGRIDWIEKYFKVKKEKIDKMQRFLQGKGALM FT AFFAFLPAIGEVISIALGYMRSNVWLTTASMFAGKLIRYIILLKAMQEALNLVM" FT misc_feature complement(order(97383..97442,97452..97520,97698..97766)) FT /note="3 probable transmembrane helices predicted for FT BF0094 by TMHMM2.0 at aa 20-42, 102-124 and 128-147" FT CDS complement(97808..98800) FT /transl_table=11 FT /locus_tag="BF9343_0094" FT /old_locus_tag="BF0095" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3252 SWALL:AAO78358 (EMBL:AE016939) (336 aa) FT fasta scores: E(): 2.7e-86, 63.09% id in 336 aa" FT /db_xref="GOA:Q5LJ03" FT /db_xref="UniProtKB/TrEMBL:Q5LJ03" FT /protein_id="CAH05873.1" FT /translation="MRNQRLQGRITAGRFTLPIVIFTCIACWVLTSVLLPGLEVKESSY FT PLWNIVNIPAWANRIVSFLLFAGIGYFLIELNNTFAIIRMRASVQTSLYFLLITACPGM FT HLLYAGDVAAVTFLISLYFLFKSYQQPRPAGYLFHSFALLSAGSVAFPQLTYFIPIWLM FT GASGFQSLTFRSFCGSIIGWSIPYWFLLGHAFFHNEIELFYQPFIHLADFRDIDFGRDF FT QLWEVVTLGYLFILYIVSSIHCIVAGYEDKIRTRAYLHFLIFLNFCIFLFIVLQPALSM FT NLLSLLLIGISILVGHLFVLTNSKSSNLFFIGSMITLIALFCFNIWTLL" FT misc_feature complement(order(97814..97882,97901..97954,97964..98032, FT 98069..98137,98210..98278,98315..98383,98426..98521, FT 98579..98638,98696..98764)) FT /note="9 probable transmembrane helices predicted for FT BF0095 by TMHMM2.0 at aa 13-35, 55-74, 94-125, 140-162, FT 175-197, 222-244, 257-279, 283-300 and 307-329" FT CDS complement(98800..100074) FT /transl_table=11 FT /gene="purD" FT /locus_tag="BF9343_0095" FT /old_locus_tag="BF0096" FT /product="putative phosphoribosylamine--glycine ligase" FT /EC_number="6.3.4.13" FT /note="Similar to Escherichia coli FT phosphoribosylamine--glycine ligase PurD or B4005 FT SWALL:PUR2_ECOLI (SWALL:P15640) (429 aa) fasta scores: E(): FT 5.5e-69, 48.25% id in 429 aa, and to Bacteroides FT thetaiotaomicron phosphoribosylamine--glycine ligase BT3253 FT SWALL:AAO78359 (EMBL:AE016939) (424 aa) fasta scores: E(): FT 1.1e-136, 83.96% id in 424 aa, and to Pseudomonas putida FT phosphoribosylamine--glycine ligase PurD or PP4823 FT SWALL:AAN70392 (EMBL:AE016792) (431 aa) fasta scores: E(): FT 8.1e-71, 49.06% id in 428 aa" FT /db_xref="GOA:Q5LJ02" FT /db_xref="InterPro:IPR000115" FT /db_xref="InterPro:IPR011054" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="InterPro:IPR020560" FT /db_xref="InterPro:IPR020561" FT /db_xref="InterPro:IPR020562" FT /db_xref="UniProtKB/TrEMBL:Q5LJ02" FT /protein_id="CAH05874.1" FT /translation="MKILLLGSGGREHALAWKIAQSPKVEKLFIAPGNAGTGEVGENVN FT IKATDFAALGAFALEESIDMIVVGPEDPLVEGIYDHFQSNPCLKNIAIIGPSKEGARLE FT GSKEFAKEFMHRHHIPTARYQSVTADTLNEGLAFLETLEAPYVLKADGLCAGKGVLILP FT TLEEAKKELKEMLGGMFGNASATVVIEEFLSGIECSVFVLTDGDHYKVLPVAKDYKRIG FT EGDKGLNTGGMGSVTPVPFADEVFMEKVRTRIIEPTVNGLKAEGITYKGFIFLGLINVK FT GEPMVIEYNVRMGDPETESVMLRIQSDLVELLEGVAEGNLDARSLVIDPRTATCVMMVS FT GGYPEAYQKGYAINGLEAARATDSILFHAGTAMKDGQAVTSGGRVLAICSYGNDKADAL FT AQCYKVADMIDFKDKNYRRDIGFDL" FT misc_feature complement(98806..99081) FT /note="Pfam match to entry PF02843 GARS_C, FT Phosphoribosylglycinamide synthetase, C domain, score FT 111.3, E-value 1.5e-30" FT misc_feature complement(99091..99507) FT /note="Pfam match to entry PF01071 GARS, FT Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain, FT score 205.7, E-value 6.1e-59" FT misc_feature complement(99244..99267) FT /note="PS00030 Eukaryotic putative RNA-binding region RNP-1 FT signature." FT misc_feature complement(99508..99759) FT /note="Pfam match to entry PF02842 GARS_B, FT Phosphoribosylglycinamide synthetase, B domain, score FT 117.8, E-value 1.7e-32" FT misc_feature complement(99763..100074) FT /note="Pfam match to entry PF02844 GARS_N, FT Phosphoribosylglycinamide synthetase, N domain, score FT 169.7, E-value 4.2e-48" FT CDS complement(100096..102255) FT /transl_table=11 FT /locus_tag="BF9343_0096" FT /old_locus_tag="BF0097" FT /product="putative exported dipeptidyl peptidase IV" FT /note="Similar to Xanthomonas maltophilia dipeptidyl FT peptidase IV SWALL:P95782 (EMBL:D83263) (741 aa) fasta FT scores: E(): 2.2e-56, 32.47% id in 622 aa, and to FT Bacteroides thetaiotaomicron dipeptidyl peptidase IV BT3254 FT SWALL:AAO78360 (EMBL:AE016939) (732 aa) fasta scores: E(): FT 1.7e-113, 69.95% id in 729 aa, and to Xanthomonas FT axonopodis dipeptidyl peptidase IV XAC4046 SWALL:Q8PFD7 FT (EMBL:AE012053) (757 aa) fasta scores: E(): 1.2e-57, 31.48% FT id in 632 aa" FT /db_xref="GOA:Q5LJ01" FT /db_xref="InterPro:IPR001375" FT /db_xref="InterPro:IPR002469" FT /db_xref="UniProtKB/TrEMBL:Q5LJ01" FT /protein_id="CAH05875.1" FT /translation="MIKQIMKTNSKQKSALLVMLLSLLIPNIMAQEPKMPTLEDLIPGG FT ATYRSAENISGLQWWGDQCIKPGIEAVFMINPKNGKETPLTTRNIVNKALEAGNHGKLQ FT HFYNVSFPWPKKSLMLIALPDKYIVYDFDYREVISTRPLPKEGANRDYHPETGHVAYTI FT GNNLYVDDRAVTNEPEGIVCGQSVHRNEFGIKKGTFWSPSGNLLAFYRMDQSMVAQYPL FT VDVTAPIAEVNNIRYPMAGMTSHQVKVGIYNPTTGKSIYLNAGDPTDRYFTNISWAPDE FT KSLYLIELNRNQNHAKLCRYDVETGELTATLFEEKSDKYVEPQDPIIFLPWDNSKFIYQ FT SQKDGFSHLYLYDTNGRQIRQLTEGDWLVKEVLGFDTKKKEIIIASTEFSPLQNNLFRL FT DTKTGTRTPLGSAEGVHSGQLSPSGRYLIDQYNSPTVPRSINIIDVQSGKSVNLLTAAD FT PFTGYKMPGIETGTIKAADGKTDLYYRLIKPADFDPNKKYPAIVYVYGGPHAQLVTNGW FT QNGARGWDIYMANKGYIMFTVDGRGSSNRGLDFENVTFRQLGIEEGRDQVKGTEFLKSL FT PYVDGNRIGVHGWSFGGHMTTALLLRYPEIFKVGVAGGPVIDWGYYEVMYGERYMDTPQ FT SNPKGYKECNLKNLAGNLKGHLMIIHDDHDDTCVPQHTLSFMKACIDARTYPDLFIYPC FT HKHNVSGRDRVHLHEKITRYFEDYL" FT misc_feature complement(100471..100695) FT /note="Pfam match to entry PF00326 Peptidase_S9, Prolyl FT oligopeptidase family, score 21.8, E-value 2.3e-05" FT misc_feature complement(100720..102150) FT /note="Pfam match to entry PF00930 DPPIV_N_term, Dipeptidyl FT peptidase IV (DPP IV) N-terminal region, score 109.6, FT E-value 5e-30" FT misc_feature complement(102166..102255) FT /note="Signal peptide predicted for BF0097 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 1.000 between residues 30 and 31" FT CDS complement(102391..103731) FT /transl_table=11 FT /locus_tag="BF9343_0097" FT /old_locus_tag="BF0098" FT /product="putative methylase" FT /note="Similar to Bacteroides thetaiotaomicron putative FT N6-adenine-specific DNA methylase BT3255 SWALL:AAO78361 FT (EMBL:AE016939) (489 aa) fasta scores: E(): 4.3e-143, FT 78.11% id in 489 aa, and to Synechocystis sp. hypothetical FT protein SLR0064 SWALL:Y064_SYNY3 (SWALL:Q55156) (384 aa) FT fasta scores: E(): 2.2e-46, 38.48% id in 369 aa, and to FT Vibrio parahaemolyticus putative N6-adenine-specific DNA FT methylase vp1597 SWALL:BAC59860 (EMBL:AP005078) (707 aa) FT fasta scores: E(): 4.4e-41, 35.06% id in 405 aa" FT /db_xref="GOA:Q5LJ00" FT /db_xref="InterPro:IPR000241" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR004114" FT /db_xref="UniProtKB/TrEMBL:Q5LJ00" FT /protein_id="CAH05876.1" FT /translation="MSEQFEMIAKTFQGLEEILAEELTTLGANDVQIGRRMVSFTGDKE FT MMYKANFCLRTAIRILKPIKHFTAKDADAVYEQIKAIRWEEILDVDKTFAVDAVVFSDE FT FRHSKFVSYKVKDAIVDYFRELNGKRPSVRISRPDVLLNIHIAQTTCTLSLDSSGESLH FT RRGYRQEAVEAPLNEVLAAGMILMTGWKGECDLIDPMCGSGTIPIEAALIARNIAPGVF FT RKEFAFEKWGDFDQNLFDRIYNDDSQEREFTHKIYGYDNNPKANEIATHNVKAAGVSKD FT IILKLQPFQQFEQPAEKSIIITNPPYGERISTNDLLGLYNMIGERLKHAFVGNDAWILS FT YREECFDQIGLKPSVKTPLFNGPLECEFRKYQIFDGKYKEFKSQEGGDENGERAPKERR FT EFKPRREEGGFRGERRPREERNSEYGDRRPREFKGNREPKIKKPQED" FT misc_feature complement(102622..103239) FT /note="Pfam match to entry PF01170 UPF0020, Putative RNA FT methylase family UPF0020, score 144.7, E-value 1.4e-40" FT misc_feature complement(102811..102831) FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT misc_feature complement(103105..103140) FT /note="PS01261 Uncharacterized protein family UPF0020 FT signature." FT misc_feature complement(103261..103554) FT /note="Pfam match to entry PF02926 THUMP, THUMP domain, FT score 51.6, E-value 1.5e-12" FT CDS complement(103809..104708) FT /transl_table=11 FT /locus_tag="BF9343_0098" FT /old_locus_tag="BF0099" FT /product="putative serine acetyltransferase" FT /EC_number="2.3.1.30" FT /note="Similar to Synechococcus sp. serine FT acetyltransferase, plasmid srpH SWALL:SRPH_SYNP7 FT (SWALL:Q59967) (319 aa) fasta scores: E(): 9.8e-49, 48.28% FT id in 292 aa, and to Bacteroides thetaiotaomicron serine FT acetyltransferase BT3256 SWALL:AAO78362 (EMBL:AE016939) FT (300 aa) fasta scores: E(): 1.6e-103, 89.03% id in 301 aa, FT and to Synechococcus sp. CysE sex3037 SWALL:AAM81165 FT (EMBL:AF441790) (319 aa) fasta scores: E(): 9.8e-49, 48.28% FT id in 292 aa" FT /db_xref="GOA:Q5LIZ9" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:Q5LIZ9" FT /protein_id="CAH05877.1" FT /translation="MSPLNFTHILTQTVDELSESESYKGLFHQHKDGEPLPSPRVLCDV FT IELARSILFPGYYGNSTVNSRTINYHIGVNVEKLFNLLTEQILAGLCFGNGDRCDECTE FT AKREEAARLAAKFISKLPHLRRVLATDVEAAYNGDPAAQSFGEVIFCYPAIKAISNYRI FT AHELLELGVPLIPRIITEMAHSETGIDIHPGARIGTHFTIDHGTGVVIGATSIIGNNVK FT LYQGVTLGARSFPLDADGKPIKGIPRHPILEDNVIVYSNATILGRITIGRDATVGGNIW FT VTENIPAGARIVQTKAKK" FT misc_feature complement(103893..103946) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 10.6, FT E-value 3" FT misc_feature complement(104016..104069) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 17.2, FT E-value 0.034" FT CDS 104835..106865 FT /transl_table=11 FT /locus_tag="BF9343_0099" FT /old_locus_tag="BF0100" FT /product="putative two-component regulator sensor kinase" FT /note="Similar to Bacteroides thetaiotaomicron putative FT two-component system sensor histidine kinase BT3257 FT SWALL:AAO78363 (EMBL:AE016939) (692 aa) fasta scores: E(): FT 1.6e-160, 61.41% id in 679 aa, and to Escherichia coli, and FT Escherichia coli O157:H7 hypothetical protein YpdA or b2380 FT or Z3645 or ECS3260 SWALL:YPDA_ECOLI (SWALL:P76523) (565 FT aa) fasta scores: E(): 4.9e-11, 25.67% id in 335 aa, and to FT Escherichia coli O6 hypothetical protein YpdA or c2919 FT SWALL:Q8FFE1 (EMBL:AE016764) (565 aa) fasta scores: E(): FT 7.6e-11, 25.37% id in 335 aa" FT /db_xref="GOA:Q5LIZ8" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR010559" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:Q5LIZ8" FT /protein_id="CAH05878.1" FT /translation="MRHRANLAIVFFCLLLPLTGCKQKINRSDSAFGGMSIDSVERCAQ FT DSLFSNTRYSRSLLRHAMADAPDSLSYYYLLSFYSKSYFVTADFDSVLYYNRLVKRFCN FT EVELSAEVHDLLSTVYNMEGNVLMQCTQPDSAIISYKKAYEERLQGQQTDYLPDLCINL FT ADANVHKGDYAYAAYYYRRALFICDSLGLPDRNKFPVYYGLGQTYMELRDFELSNHYYE FT LAGNFFPQMSVSEKWTYLNNRGNHFYYKKDYPQAVHYIGRALEVVKSYPQMVFEQNLCK FT ANLGELYVITNKLDSAQLYLDESYRFFSGIGNQSALYYIETQMIELALKKGNVALAGDI FT IRRSADYGHIDANMINIRNHYLQHYYEQVGNYKKAYEYQKHDLQLNDSIRNERVRTRVA FT ELDMRYRQDTIVMRKELVIEKQKGEMEVLKLTTYIWALIGIVSVIVAGLVYWYMKKKRM FT FLQERHINQISRFRMENIRNRLSPHFTFNVLNREISRFRDGETLCGDLTELVKLLRKSL FT ELTEKLSISLYDELEFVKTYIHLEQGRLGSDFSMDVKIEEDLDIQQVVIPSMVVQIPVE FT NALKHGLAGIDGLKLLGISVCRKGSGILIDICDNGRGYSPQTLSSTRGTGTGLKVLYQT FT IQLLNDKNREKIRFEIKNLVNNGQTGTQVLIYIPLDYSYNL" FT misc_feature 105183..105284 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 2.1, E-value 2.3" FT misc_feature 105303..105404 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 12.5, E-value 0.18" FT misc_feature 105426..105527 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 5.9, E-value 0.91" FT misc_feature 105543..105644 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 21.6, E-value 0.0016" FT misc_feature 106125..106193 FT /note="1 probable transmembrane helix predicted for BF0100 FT by TMHMM2.0 at aa 431-453" FT misc_feature 106518..106847 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 35.3, FT E-value 1.2e-07" FT CDS 106878..107633 FT /transl_table=11 FT /locus_tag="BF9343_0100" FT /old_locus_tag="BF0101" FT /product="putative two-component response regulator" FT /note="Similar to Bacteroides thetaiotaomicron FT two-component system response regulator BT3258 FT SWALL:AAO78364 (EMBL:AE016939) (210 aa) fasta scores: E(): FT 1.7e-56, 70.47% id in 210 aa, and to Vibrio cholerae FT hypothetical response regulatory protein Vc0693 FT SWALL:Q9KU36 (EMBL:AE004155) (237 aa) fasta scores: E(): FT 5e-13, 31.2% id in 250 aa, and to Vibrio parahaemolyticus FT hypothetical response regulatory protein Vp0538 FT SWALL:BAC58801 (EMBL:AP005074) (242 aa) fasta scores: E(): FT 3.4e-12, 40.32% id in 124 aa" FT /db_xref="GOA:Q5LIZ7" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR007492" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/TrEMBL:Q5LIZ7" FT /protein_id="CAH05879.1" FT /translation="MYKVIIIDDEKAAIETLRRDLEVQTDLEIKGTAGNGAKGKKLIMD FT IHPDLLFLDIELPDIQGIRLLSEIREQVLWDMKVVFYTAYDKYLLQALRESAFDYLLKP FT YDIEELNLIIERYRKTMASARPLPSFASAVGTLMPGRDLFMISTVTGFRFLRLEEIGYF FT EYLKDKRLWQVELFNQTKLCLKKNTTAGDIIGYSDAFVQISQSAIININYLAMIKSKQC FT LLYPPFSDKEDLIISRGFLKELQERFCII" FT misc_feature 106881..107243 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 86.2, E-value 5.7e-23" FT CDS 107845..107961 FT /transl_table=11 FT /locus_tag="BF9343_0101" FT /old_locus_tag="BF0102" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIZ6" FT /protein_id="CAH05880.1" FT /translation="MKKLRLFYDVVISNNLFYFFFMFHVTQKKTEAVSNGLF" FT misc_feature 107863..107922 FT /note="1 probable transmembrane helix predicted for BF0102 FT by TMHMM2.0 at aa 7-26" FT CDS complement(108009..108404) FT /transl_table=11 FT /locus_tag="BF9343_0102" FT /old_locus_tag="BF0103" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3259 SWALL:AAO78365 (EMBL:AE016939) (131 aa) FT fasta scores: E(): 1.3e-34, 68.7% id in 131 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT2500 FT SWALL:AAO77607 (EMBL:AE016936) (172 aa) fasta scores: E(): FT 2.7e-10, 29.54% id in 132 aa" FT /db_xref="InterPro:IPR024339" FT /db_xref="UniProtKB/TrEMBL:Q5LIZ5" FT /protein_id="CAH05881.1" FT /translation="MKTTGFLKTVALSAVLLVSSVAVSARNYDNNLIYNSEEENGMLIG FT QTVYKKEGSSLANYMKYNYKYDDNKRMIESQTMKWNSNKNNWENDLLVRYTYEGKTITT FT NYYKWNNRKSEFILAPEMTVTMDNPNL" FT misc_feature complement(108330..108404) FT /note="Signal peptide predicted for BF0103 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.645 between residues 25 and 26" FT CDS complement(108674..111499) FT /transl_table=11 FT /gene="polA" FT /locus_tag="BF9343_0103" FT /old_locus_tag="BF0104" FT /product="putative DNA polymerase I" FT /EC_number="2.7.7.7" FT /note="Similar to Escherichia coli DNA polymerase I PolA or FT ResA or B3863 SWALL:DPO1_ECOLI (SWALL:P00582) (928 aa) FT fasta scores: E(): 2.1e-121, 44.57% id in 949 aa, and to FT Bacteroides thetaiotaomicron DNA polymerase I BT3260 FT SWALL:Q8A2P5 (EMBL:AE016939) (949 aa) fasta scores: E(): FT 1.7e-191, 83.26% id in 950 aa, and to Yersinia pestis DNA FT polymerase I PolA or YPO0017 or Y3811 SWALL:Q8ZJS1 FT (EMBL:AJ414141) (932 aa) fasta scores: E(): 7.2e-125, FT 42.66% id in 947 aa" FT /db_xref="GOA:Q5LIZ4" FT /db_xref="InterPro:IPR001098" FT /db_xref="InterPro:IPR002298" FT /db_xref="InterPro:IPR002421" FT /db_xref="InterPro:IPR002562" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR008918" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR018320" FT /db_xref="InterPro:IPR019760" FT /db_xref="InterPro:IPR020045" FT /db_xref="InterPro:IPR020046" FT /db_xref="UniProtKB/TrEMBL:Q5LIZ4" FT /protein_id="CAH05882.1" FT /translation="MKKLKNMNQNSKLFLLDAYALIYRAYYAFIKNPRINSKGFNTSAI FT LGFVNTLEEVLKKENPTHIGVAFDPPGPTFRHEAFEQYKAQREETPEAIRLSVPIIKDI FT IKAYRIPILEVAGYEADDVIGTLATEAGNQGITTYMMTPDKDYGQLVTDHVFMYRPKYG FT DKEFEVMGVEQVKAKFDIQSPAQVIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSI FT ENLLEHTDQLKGALKTKVETNREMIIFSKFLATIKVDVPIRLDMNSLVREQADEDTLRK FT IFEELEFRTLMERIFKKESSPASPIAGTLFNQENGPVQGNLFEEFTPDHTNEEKKSNLE FT SLNSLSYDYQLIDTEEKRNEIIKKLLTSEILALDTETTGTDPMDAELVGMSFSITENQA FT FYVPVPAEREEAIKIVREFEPVFKNEKSLKVGQNIKYDMLVLQNYGIEVRGKLFDTMVA FT HYVLQPELRHNMDYLAEIYLHYQTIHIEELIGPKGKGQKNMRDLSPQEVYLYACEDADV FT TLKLKNILEQELKKNDAEKLFYEIEMPLVPVLVNIESNGVRLDTEALKQSSEHFTTRLQ FT SIEKEIYTLAEGEFNIASPKQVGEILFDKLKIVEKAKKTKTGQYVTSEEVLESLRNKHD FT IIGKILEYRGLKKLLSTYIDALPQLINPKTGRIHTSFNQTVTATGRLSSSNPNLQNIPI FT RDEDGKEIRKAFIPDDGCSFFSADYSQIELRIMAHLSEDKNMIDAFLSGYDIHAATAAK FT IYKVDIKEVTADMRRKAKTANFGIIYGISVFGLAERMNVDRKEAKELIDGYFETYPQVK FT SYMDKSIQVAREHGYVETIFHRKRFLPDINSRNAVVRGYAERNAINAPIQGSAADIIKV FT AMARIYERFKAEGLKAKMILQVHDELNFSVPAKEKEIVEQVVIEEMEKAYRMHVPLKAD FT CGWGTNWLEAH" FT misc_feature complement(108680..109825) FT /note="Pfam match to entry PF00476 DNA_pol_A, DNA FT polymerase family A, score 594.6, E-value 5.2e-176" FT misc_feature complement(109142..109201) FT /note="PS00447 DNA polymerase family A signature." FT misc_feature complement(109910..110473) FT /note="Pfam match to entry PF01612 3_5_exonuclease, 3'-5' FT exonuclease, score 164.5, E-value 1.5e-46" FT misc_feature complement(110657..110950) FT /note="Pfam match to entry PF01367 5_3_exonuclease, 5'-3' FT exonuclease, C-terminal SAM fold, score 157.7, E-value FT 1.7e-44" FT misc_feature complement(110963..111337) FT /note="Pfam match to entry PF02739 5_3_exonuc_N, 5'-3' FT exonuclease, N-terminal resolvase-like domain, score 108.6, FT E-value 1e-29" FT CDS 111567..112541 FT /transl_table=11 FT /locus_tag="BF9343_0104" FT /old_locus_tag="BF0105" FT /product="putative octaprenyl-diphosphate synthase" FT /note="Similar to Escherichia coli, and Shigella flexneri FT octaprenyl-diphosphate synthase IspB or Cel or B3187 or FT SF3227 SWALL:ISPB_ECOLI (SWALL:P19641) (323 aa) fasta FT scores: E(): 1.2e-27, 32.66% id in 300 aa, and to FT Bacteroides thetaiotaomicron octaprenyl-diphosphate FT synthase BT3261 SWALL:AAO78367 (EMBL:AE016939) (324 aa) FT fasta scores: E(): 3.7e-94, 75.61% id in 324 aa, and to FT Chlorobium tepidum polyprenyl synthetase CT1206 FT SWALL:Q8KD49 (EMBL:AE012881) (324 aa) fasta scores: E(): FT 2.4e-36, 34.87% id in 324 aa" FT /db_xref="GOA:Q5LIZ3" FT /db_xref="InterPro:IPR000092" FT /db_xref="InterPro:IPR008949" FT /db_xref="InterPro:IPR017446" FT /db_xref="UniProtKB/TrEMBL:Q5LIZ3" FT /protein_id="CAH05883.1" FT /translation="MDSLSLIKSPITTELEDFKNLFDSSLSSSNLLLNNVIAHIRQRNG FT KMMRPILVLLVAKLYGEIKPETLHAAVSLELLHTASLVHDDVVDESTERRGQLSVNAIF FT NNKVAVLVGDFLLATSLVHAERTRNHDIIGVVACLGQDLAEGEILQLSNVSNREYSETI FT YFDVIRKKTAALFAACTKAAALSVEVTDEKAEFARLFGENIGICFQIKDDIFDYFESKE FT IGKPTGNDMLEGKLTLPALYVLNTTTDAWAQEMALRVKAGTATVDEITRLIEFIKQNGG FT IEYAVKVMYEYKERALDLLRTLPDSAVKTSLITYLDYVVDRDK" FT misc_feature 111660..112397 FT /note="Pfam match to entry PF00348 polyprenyl_synt, FT Polyprenyl synthetase, score 163.9, E-value 2.4e-46" FT misc_feature 111810..111854 FT /note="PS00723 Polyprenyl synthetases signature 1." FT misc_feature 112176..112214 FT /note="PS00444 Polyprenyl synthetases signature 2." FT CDS complement(112551..113258) FT /transl_table=11 FT /locus_tag="BF9343_0105" FT /old_locus_tag="BF0106" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3262 SWALL:AAO78368 (EMBL:AE016939) (226 aa) FT fasta scores: E(): 7.4e-21, 34.45% id in 209 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT3652 SWALL:AAO78757 (EMBL:AE016941) (262 aa) fasta FT scores: E(): 2.5e-07, 23.68% id in 228 aa" FT /db_xref="InterPro:IPR009677" FT /db_xref="UniProtKB/TrEMBL:Q5LIZ2" FT /protein_id="CAH05884.1" FT /translation="MAEQALFQPFNRNQQRENLESTKETDLLISLIPSLQEDFYVDSLT FT TGASKETLSKLLLRNPGIKNETAVIEMIHFLHDEGDRISFSILLPFLVAEYDPKELEEK FT IRERFFGIELFIRKCNNLHHFITCIKADQTFKIGEEELKRGVLAWDMGRMVCLTRIAYD FT AGFIDESLAWNYICSAGQQCIQAFNDWTEVGKSFLLGQAMEATEKRKQELYIRLYRQAT FT ENPNSPWKKRTLK" FT CDS 113306..113479 FT /transl_table=11 FT /locus_tag="BF9343_0106" FT /old_locus_tag="BF0107" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIZ1" FT /protein_id="CAH05885.1" FT /translation="MLCIFPGASASRYDDTSNSLTLHSIYNKSIYVKVRETRLLITFHN FT MNFAEFQEKDNN" FT CDS complement(113659..114555) FT /transl_table=11 FT /locus_tag="BF9343_0107" FT /old_locus_tag="BF0108" FT /product="putative deoxyribose-phosphate aldolase" FT /EC_number="4.1.2.4" FT /note="Similar to Escherichia coli, and Escherichia coli O6 FT deoxyribose-phosphate aldolase DeoC or Dra or ThyR or B4381 FT or C5465 SWALL:DEOC_ECOLI (SWALL:P00882) (259 aa) fasta FT scores: E(): 1.1e-27, 41.39% id in 244 aa, and to FT Bacteroides thetaiotaomicron putative deoxyribose-phosphate FT aldolase BT3263 SWALL:AAO78369 (EMBL:AE016939) (300 aa) FT fasta scores: E(): 2.5e-97, 83.83% id in 297 aa, and to FT Caenorhabditis elegans putative deoxyribose-phosphate FT aldolase f09e5.3 SWALL:DEOC_CAEEL (SWALL:Q19264) (303 aa) FT fasta scores: E(): 6.6e-36, 43.4% id in 288 aa" FT /db_xref="GOA:Q5LIZ0" FT /db_xref="InterPro:IPR002915" FT /db_xref="InterPro:IPR011343" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q5LIZ0" FT /protein_id="CAH05886.1" FT /translation="MNDTPQDKYLTALAKYDTQLNDADVQVQVAALIEKKVPENNTEEV FT KKFLFNCIDLTTLNTTDSDESVMRFTEKVNRFDDEFPDLKNVAAICVYPNFAQVVKDTL FT EVEGINIACVSGGFPSSQTFTEVKIAETAMALADGADEIDIVIPVGAFLSGDYETMCEE FT IMELKETCKEHHLKVILETGALKTASNIKKASILSMYSGADFIKTSTGKQQPAATPEAA FT YVMCQAIKEYYEQTGNKVGFKPAGGINTVNDALIYYTIVKEVLGKEWLSNELFRLGTSR FT LANLLLSEIKGEELKFF" FT misc_feature complement(113731..114417) FT /note="Pfam match to entry PF01791 DeoC, FT Deoxyribose-phosphate aldolase, score 202.2, E-value FT 6.6e-58" FT CDS complement(114548..114886) FT /transl_table=11 FT /locus_tag="BF9343_0108" FT /old_locus_tag="BF0109" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3264 SWALL:AAO78370 (EMBL:AE016939) FT (112 aa) fasta scores: E(): 1.6e-34, 81.25% id in 112 aa, FT and to Leptospira interrogans conserved hypothetical FT protein LB212 SWALL:Q8EXJ6 (EMBL:AE011608) (114 aa) fasta FT scores: E(): 2.7e-22, 58.87% id in 107 aa, and to FT Staphylococcus aureus hypothetical protein sav1459 sav1459 FT or sa1292 or mw1349 SWALL:Q99U30 (EMBL:AP003362) (105 aa) FT fasta scores: E(): 5.7e-12, 45.45% id in 99 aa" FT /db_xref="InterPro:IPR004518" FT /db_xref="InterPro:IPR012359" FT /db_xref="UniProtKB/TrEMBL:Q5LIY9" FT /protein_id="CAH05887.1" FT /translation="MTLEEAQKAVDEWIHKYGVRYFSELTNMAVLTEEVGELARIMARK FT YGDQSFKEGEKDDISDEITDVLWVLLCIANQTGVNLTEAFARNLEKKTQRDNKRHINNP FT KLSEHGNE" FT CDS complement(114886..115338) FT /transl_table=11 FT /gene="dtd" FT /locus_tag="BF9343_0109" FT /old_locus_tag="BF0110" FT /product="putative D-tyrosyl-tRNA acylase" FT /note="Similar to Bacillus subtilis putative D-tyrosyl-tRNA FT Dtd SWALL:DTD_BACSU (SWALL:O32042) (146 aa) fasta scores: FT E(): 4.5e-24, 51.37% id in 146 aa, and to Bacteroides FT thetaiotaomicron putative D-tyrosyl-tRNA deacylase BT3265 FT SWALL:AAO78371 (EMBL:AE016939) (150 aa) fasta scores: E(): FT 4.7e-50, 86% id in 150 aa, and to Enterococcus faecalis FT hypothetical protein EF1973 SWALL:AAO81719 (EMBL:AE016953) FT (148 aa) fasta scores: E(): 3.3e-29, 58.38% id in 149 aa" FT /db_xref="GOA:Q5LIY8" FT /db_xref="HSSP:2DBO" FT /db_xref="InterPro:IPR003732" FT /db_xref="InterPro:IPR023509" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIY8" FT /protein_id="CAH05888.1" FT /translation="MRVVIQRVSHASVTIDGHCKSAIQKGMMILVGIEETDSWEDIDWL FT CKKIVNLRIFDDENGVMNKSILEDEGNILVISQFTLHASTKKGNRPSYIKAAKPEISIP FT LYEQFCNDLSCALGKEVKTGEFGADMKVELLNDGPVTICIDTKNKE" FT misc_feature complement(114901..115257) FT /note="Pfam match to entry PF02580 Tyr_Deacylase, FT D-Tyr-tRNA(Tyr) deacylase, score 210.1, E-value 2.8e-60" FT CDS complement(115384..117210) FT /transl_table=11 FT /gene="uvrC" FT /locus_tag="BF9343_0110" FT /old_locus_tag="BF0111" FT /product="putative excinuclease UvrC protein" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT and Escherichia coli O157:H7 UvrABC system protein c UvrC FT or B1913 or C2326 or Z3001 or ECS2651 SWALL:UVRC_ECOLI FT (SWALL:P07028) (610 aa) fasta scores: E(): 4.1e-55, 32.18% FT id in 609 aa, and to Bacteroides thetaiotaomicron FT excinuclease ABC subunit C BT3266 SWALL:AAO78372 FT (EMBL:AE016939) (609 aa) fasta scores: E(): 1.3e-194, FT 86.51% id in 608 aa, and to Eubacterium acidaminophilum FT UvrC protein uvrC SWALL:Q93SG1 (EMBL:AJ312124) (607 aa) FT fasta scores: E(): 2.9e-62, 36.34% id in 597 aa" FT /db_xref="GOA:Q5LIY7" FT /db_xref="InterPro:IPR000305" FT /db_xref="InterPro:IPR001162" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR004791" FT /db_xref="InterPro:IPR009055" FT /db_xref="InterPro:IPR010994" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIY7" FT /protein_id="CAH05889.1" FT /translation="MDTNQELKTSEYLKGIVSNLPEKPGIYQYLNAEGTIIYVGKAKNL FT KRRVYSYFSKEHQPGKTRVLVSKIADIRYIVVNSEEDALLLENNLIKKYKPRYNVLLKD FT DKTYPSICVQNEYFPRVFKTRRIIRNGSSYYGPYSHSPSMHAVLDLIKHLYPLRTCNLN FT LSPENIRAGKFNVCLEYHIKNCAGPCIGLQSQEEYLKNIAEIKEILKGNTQEISRLLYQ FT RMQDLAAEMKFEEAQKVKEKYALIENYRSKSEVVSSVLHNIDVFSIEEDGEKSAFINYL FT HITNGAINQAFTFEYKKKLNETKEELLTLGIIEMRERYKSASREIIVPFDIEIELNDVT FT FTIPQRGDKKKLLELSLLNVKQYKADRMKQAEKLNPEQRSMRLMKEIQQELHLDRLPMQ FT IECFDNSNIQGTDAVAACVVFKKAKPSKSDYRKYNIKTVVGADDYASMKEVVRRRYQRA FT IEEESPLPDLIITDGGKGQMEVVRQVMEELQLDIPIAGLAKDRKHRTSEVLFGFPPQTI FT GIKQHSPLFRLLEQIQDEVHRFAITFHRDKRSKRQVASALDNIKGIGEKTKTALLKEFK FT SVKRIKEATIEEVSAIIGESKAKIIKEGLDNH" FT misc_feature complement(116890..117144) FT /note="Pfam match to entry PF01541 Exci_endo_N, FT Endo/excinuclease amino terminal domain, score 105.9, FT E-value 6.6e-29" FT CDS complement(117263..117799) FT /transl_table=11 FT /gene="apt" FT /locus_tag="BF9343_0111" FT /old_locus_tag="BF0112" FT /product="putative adenine phosphoribosyltransferase" FT /EC_number="2.4.2.7" FT /note="Similar to Escherichia coli, and Escherichia coli O6 FT adenine phosphoribosyltransferase Apt or B0469 or C0588 FT SWALL:APT_ECOLI (SWALL:P07672) (183 aa) fasta scores: E(): FT 2.6e-25, 50.62% id in 160 aa, and to Bacteroides FT thetaiotaomicron adenine phosphoribosyltransferase BT3267 FT SWALL:AAO78373 (EMBL:AE016939) (176 aa) fasta scores: E(): FT 9.5e-54, 86.51% id in 178 aa, and to Leptospira interrogans FT adenine phosphoribosyltransferase LB176 SWALL:Q8EXN2 FT (EMBL:AE011606) (177 aa) fasta scores: E(): 1.1e-26, 50.29% FT id in 169 aa, and to Triticum aestivum adenine FT phosphoribosyltransferase 1 apt1 SWALL:APT1_WHEAT FT (SWALL:Q43199) (181 aa) fasta scores: E(): 1.5e-25, 50% id FT in 156 aa" FT /db_xref="GOA:Q5LIY6" FT /db_xref="HSSP:1G2P" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR005764" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIY6" FT /protein_id="CAH05890.1" FT /translation="MIMSKEKLIKSIREVPDFPIPGILFYDVTTLFKDSERLQELSDIM FT YEMYKDKGITKVVGIESRGFIMGPILATRLGAGFIPIRKPGKLPAETMEESYDKEYGKD FT TVQIHKDALNENDVVLLHDDLLATGGTMKAACNLVKKLHPKKVYVNFIIELKELNGKQV FT FENDQDVDIQSVLSL" FT misc_feature complement(117272..117727) FT /note="Pfam match to entry PF00156 Pribosyltran, FT Phosphoribosyl transferase domain, score 140.1, E-value FT 3.3e-39" FT CDS complement(117850..119727) FT /transl_table=11 FT /gene="gidA" FT /locus_tag="BF9343_0112" FT /old_locus_tag="BF0113" FT /product="putative glucose inhibited division protein A" FT /note="Similar to Escherichia coli, and Escherichia coli O6 FT glucose inhibited division protein A GidA or B3741 or c4669 FT SWALL:GIDA_ECOLI (SWALL:P17112) (629 aa) fasta scores: E(): FT 1.3e-104, 47.74% id in 622 aa, and to Bacteroides FT thetaiotaomicron glucose-inhibited division protein a FT BT3268 SWALL:AAO78374 (EMBL:AE016939) (628 aa) fasta FT scores: E(): 1e-216, 88.21% id in 628 aa, and to Chlorobium FT tepidum glucose inhibited division protein A GidA or CT2283 FT SWALL:Q8KA85 (EMBL:AE012973) (621 aa) fasta scores: E(): FT 8.6e-116, 50.64% id in 622 aa" FT /db_xref="GOA:Q5LIY5" FT /db_xref="InterPro:IPR002218" FT /db_xref="InterPro:IPR004416" FT /db_xref="InterPro:IPR020595" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIY5" FT /protein_id="CAH05891.1" FT /translation="MDFKYDVIVIGAGHAGCEAAAAAANLGSKTCLITMDMNKVAQMSC FT NPAVGGIAKGQIVREIDALGGYMGLVTDQTAIQFRILNRSKGPAMWSPRAQCDRNKFIW FT AWREILENIPNLHIWQDTVKEIIVENGEVVGLKTFWDVTFHARCIVLTAGTFLNGLMHV FT GKTQLPGGRMAEPASYKLTESIAEHGIEYGRMKTGTPVRIDGRSVHYELMDTQDGECDF FT HKFSFMNTSVRHLKQLQCWTCFTNEEAHNVLRNGLADSPLFNGQIQSIGPRYCPSIETK FT IVTFPDKEQHQLFLEPEGETTQELYLNGFSSSLPMEIQIEALKKIPAFKDLVIYRPGYA FT IEYDYFDPTQLKHTLESKKIKNLFFAGQVNGTTGYEEAGGQGIIAGINAHINCHGGEPF FT TLARDEAYIGVLIDDLVTKGVDEPYRMFTSRAEYRILLRMDDADMRLTERAYKLGLVKE FT DRYALLKSKREAVENIVNFTRNYSIKAALINDALENLGTTPLRQGCKLIDLINRPQITI FT ENISEYVPAFKRELDKITDERKEEILEAAEILIKYEGYIGRERIIADKLARLESIKIKG FT KFDYDSLQSLSTEARQKLKKIDPETIAQASRIPGVSPSDINVLLVLSGR" FT misc_feature complement(117856..119715) FT /note="Pfam match to entry PF01134 GIDA, Glucose inhibited FT division protein A, score 1009.6, E-value 6.2e-301" FT misc_feature complement(117865..117930) FT /note="Predicted helix-turn-helix motif with score FT 1214.000, SD 3.32 at aa 600-621, sequence FT ETIAQASRIPGVSPSDINVLLV" FT misc_feature complement(118561..118632) FT /note="PS01281 Glucose inhibited division protein A family FT signature 2." FT misc_feature complement(119230..119253) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 120464..122152 FT /transl_table=11 FT /locus_tag="BF9343_0113" FT /old_locus_tag="BF0114" FT /product="putative lipoprotein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4492 SWALL:AAO79597 (EMBL:AE016945) FT (578 aa) fasta scores: E(): 5.7e-40, 30.42% id in 572 aa, FT and to Bacteroides thetaiotaomicron TPR-repeat-containing FT protein BT3220 SWALL:AAO78326 (EMBL:AE016939) (578 aa) FT fasta scores: E(): 1.4e-22, 24.69% id in 567 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT0240 SWALL:AAO75347 (EMBL:AE016926) (584 aa) fasta FT scores: E(): 8.9e-18, 24.39% id in 578 aa" FT /db_xref="GOA:Q5LIY4" FT /db_xref="InterPro:IPR011990" FT /db_xref="UniProtKB/TrEMBL:Q5LIY4" FT /protein_id="CAH05892.1" FT /translation="MNKTFVGFIFLLFLVGGVVSCQRSSSPYPYSLRYADSLMEISPER FT TLAYLRKLDVSTYSAGDRAYFSLLFTQATDKNMLSLLPCDSLIDTALDYYIKKDGVNWA FT KAWLYKGRIQKKMNMTEQALKSCFTALQGVEGNTGEELKLKGMLYEDMGSIYLHQSLYQ FT KAFDAFYRSYQCDSLLNDHRLVMYPLSNMGWVRVIQGKTVEAFYYLNQSIQLALRLNDS FT AFVSDIYERMSLNCENVDSAFLYAHLSHQYLTKDGDSISLWLTFGDLYLDKQELDSAEY FT YLKRILDTADFKRKILASYSLAEVEKIRGNYQRAFEYQSYYGDNIDSIFLLNKASDIER FT LAYKYDSEAKVVKEKEKQRFLIQQLCYGGVLFLLVIVVIFQRVYRRRQIARLLYEQRIT FT YLNEKTALSQLQIERLEVQISALKQSGMEREQEIDLKQAELCCVIDEKARLRNCLFMET FT SIFKHIRELSTQPRLGQNGTKGSPKVLLMKEQEQLKNILFGIYDDYIRYLKGTYPKITD FT NDCIYCCLKLCEFDDQTIAYCFGNVSKQIVAQRRLRLKKKMAEAN" FT misc_feature 120464..120538 FT /note="Signal peptide predicted for BF0114 by SignalP 2.0 FT HMM (Signal peptide probability 0.975) with cleavage site FT probability 0.356 between residues 25 and 26" FT misc_feature 120494..120526 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 120785..120850 FT /note="Predicted helix-turn-helix motif with score 983.000, FT SD 2.53 at aa 108-129, sequence LYKGRIQKKMNMTEQALKSCFT" FT misc_feature 121544..121603 FT /note="1 probable transmembrane helix predicted for BF0114 FT by TMHMM2.0 at aa 361-380" FT CDS 122322..122672 FT /transl_table=11 FT /locus_tag="BF9343_0114" FT /old_locus_tag="BF0115" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIY3" FT /protein_id="CAH05893.1" FT /translation="MKTKMIVLVGMLFTQIVFTSNNVYGEDVMAIMKDRHKVHLITHKE FT ANLQRSTLLVACGYIEESQLFLNFNSSLENRKIQVVDSETGQTVFDDTITGTSFSIFLE FT RDSDSFDIYIGR" FT misc_feature 122322..122396 FT /note="Signal peptide predicted for BF0115 by SignalP 2.0 FT HMM (Signal peptide probability 0.985) with cleavage site FT probability 0.526 between residues 25 and 26" FT CDS 122708..123931 FT /transl_table=11 FT /locus_tag="BF9343_0115" FT /old_locus_tag="BF0116" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT pyrogenic exotoxin B BT2451 SWALL:Q8A4Z6 (EMBL:AE016936) FT (426 aa) fasta scores: E(): 1.1e-05, 24.13% id in 435 aa" FT /db_xref="GOA:Q5LIY2" FT /db_xref="UniProtKB/TrEMBL:Q5LIY2" FT /protein_id="CAH05894.1" FT /translation="MKEIFKLILLLVILSGCIENDEEIILNNSDLEDVSEYKRAEDLIC FT QFSERIDKEKGGTRSSTSQIILSLAGKKSVVIPKIATRTGEISTDSVNMFIFDTEKDGR FT FGFAIATGKAEVGRVYAYVENGILSDTIENEGMAYLVSQIPDIIKQDQLNPNLTRSGEQ FT RTTHVSIPLVKTEWNQHYPYNAQMPTNGKCSISYYYAGCIPIAVAQAITYYRKCPVAYD FT WDAFTVNTGIYDTNLIAPVSQFVKKVADGIKVGYKCDGTGAKNLGSTNDFLKGWGYNVE FT RHKTNDVDKNLLYKCLITKNVVIFGGKKKKSTGHVWLVDGGVFEYSGNMMIGCTNIQVK FT AIHCNFGWNRANNGWYAIKDGAYNRPANSASQDGNNPTNDKNSPNGNFYTENDYIYFHE FT AMGTEILW" FT CDS 123949..124329 FT /transl_table=11 FT /locus_tag="BF9343_0116" FT /old_locus_tag="BF0117" FT /product="conserved hypothetical protein" FT /note="Low similarity to Bacteroides thetaiotaomicron FT hypothetical protein BT0224 SWALL:AAO75331 (EMBL:AE016926) FT (134 aa) fasta scores: E(): 0.015, 25.54% id in 137 aa, and FT to Bacteroides thetaiotaomicron hypothetical protein BT2452 FT SWALL:AAO77559 (EMBL:AE016936) (131 aa) fasta scores: E(): FT 0.21, 27.41% id in 124 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LIY1" FT /protein_id="CAH05895.1" FT /translation="MKKVFFLYCISLLCIYGCNDDSDKYSSNFLKSREVTLNAEGGDIT FT VEGREKFILVQTEEILNQDTIFSIGEINGVEYQGGWYQLEVNGKEMTLNCDRNLTGNKR FT KVVLHFQGTGNSFDVFSLTQLE" FT misc_feature 124159..124200 FT /note="PS00213 Lipocalin signature." FT CDS complement(124621..125040) FT /transl_table=11 FT /locus_tag="BF9343_0117" FT /old_locus_tag="BF0118" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein with conserved domain BT3283 FT SWALL:AAO78389 (EMBL:AE016939) (137 aa) fasta scores: E(): FT 1.6e-49, 86.13% id in 137 aa, and to Chlorobium tepidum FT hypothetical protein CT1383 SWALL:Q8KCN1 (EMBL:AE012896) FT (137 aa) fasta scores: E(): 1.7e-12, 38.05% id in 113 aa, FT and to Treponema pallidum hypothetical UPF0054 protein FT TP0650 SWALL:Y650_TREPA (SWALL:O83656) (160 aa) fasta FT scores: E(): 3.5e-09, 39.42% id in 104 aa" FT /db_xref="GOA:Q5LIY0" FT /db_xref="InterPro:IPR002036" FT /db_xref="InterPro:IPR023091" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIY0" FT /protein_id="CAH05896.1" FT /translation="MAITYQTEGIKMPDIKKRETTEWIKAVAATYEKRIGEIAYIFCSD FT EKILEVNRQYLQHDYYTDIITFDYCEGNRLSGDLFISLETVKTNSEQFNTPYEEELHRT FT IIHGILHLCGINDKGPGEREIMEAAENKALAMRKQ" FT misc_feature complement(124651..124914) FT /note="Pfam match to entry PF02130 UPF0054, Uncharacterized FT protein family UPF0054, score 25.6, E-value 2.1e-07" FT CDS 125239..125361 FT /transl_table=11 FT /locus_tag="BF9343_0118" FT /old_locus_tag="BF0119" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIX9" FT /protein_id="CAH05897.1" FT /translation="MVRIVFKELISMIFRHYLFANITEAPKSRSDIEENREMSN" FT CDS 125490..125915 FT /transl_table=11 FT /locus_tag="BF9343_0119" FT /old_locus_tag="BF0120" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIX8" FT /protein_id="CAH05898.1" FT /translation="MTEFRYSICEPLNPKVIEKGMIAPDSVIGLFNDFQWDYYLKQIEV FT AETRKMDIYFSPSLEVENKANKNGLTISAVGDPEDPEFYIFYKRPISVVKKQFFRKPQT FT VVEDYVSEITGQTKEDVIECLNALIKNDQEFLRRKIA" FT CDS 126080..126961 FT /transl_table=11 FT /locus_tag="BF9343_0120" FT /old_locus_tag="BF0121" FT /product="putative exported protein" FT /note="Similar to Shewanella oneidensis hypothetical FT protein SO0764 SWALL:Q8EIS1 (EMBL:AE015521) (269 aa) fasta FT scores: E(): 2e-24, 41.32% id in 196 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LIX7" FT /protein_id="CAH05899.1" FT /translation="MKIVIKEKVIPYILISLFSSIGLSAYGYKAEGQGGSKAVVWSISK FT IDTMQKNVQRNDERNPNIQNIEYLKKIFRQKAVDEISENIVYPLKRTSPIPSVENAEEL FT KERFDSIFDEDLIRIITSSDIDQWSEMGWRGIMLDDGILWMDYDGKITAVNYQSKYEKK FT LAKKLTSKVKGDLSSDLRHNFKGEVYKFKTKNYFIRIDELKNGMYRYACWKKENPESTK FT PDLVLENGKIEFSGSGGNHVITFKNNIYEYKVFHNKIAASGIADITLVVEKNGKEILSE FT DGKLEGDTTQTD" FT misc_feature 126080..126166 FT /note="Signal peptide predicted for BF0121 by SignalP 2.0 FT HMM (Signal peptide probability 0.904) with cleavage site FT probability 0.484 between residues 29 and 30" FT CDS 127330..127464 FT /transl_table=11 FT /locus_tag="BF9343_0121" FT /old_locus_tag="BF0122" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIX6" FT /protein_id="CAH05900.1" FT /translation="MTKSKTGRGKPHSMIIKNLLEEVVRLLPEHHAQTDKILGQREKL" FT CDS complement(127629..129254) FT /transl_table=11 FT /locus_tag="BF9343_0122" FT /old_locus_tag="BF0123" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4606 SWALL:AAO79711 (EMBL:AE016945) (394 aa) FT fasta scores: E(): 0.00073, 22.98% id in 322 aa" FT /db_xref="InterPro:IPR011871" FT /db_xref="UniProtKB/TrEMBL:Q5LIX5" FT /protein_id="CAH05901.1" FT /translation="MNRTFIMRECLGKALWLCFCLSITGCAEDDRMTPLSADSGDTADE FT LIPIHISLTGDNDYHSSSFNDASTRSHSPLIAEWVGVKAFSPTRTGEQPDYEGPRIASM FT ELTEDTLPRVSTRATVPAGVYFRLIVFRKSGNNYVFQSVADYASNGTGTPVLERGKLLT FT RSGTIRVVGYSFNTTADLGDMPSTYAYNSSTVSIPDMSKDFMTFDSGDITNVNSLSHNL FT PVSFSQKLCKLTITISPTGFPSNTITNCTGVYVKQGGNSTSWKIGPSTNVVAANTNNTA FT AFSPNTTLNTTIRMVPFAGARTITVHFNTLTVGGRTVNNNTEITSTQSVQLKEGKSYTL FT KIQFKKGPGINVPASNINLTQNGCTENDKTILSKLRWAEGNLNSQSNYNLTWASSTTDY FT GYYYIWKNVYVSSGYTGYGAVDPCTRLDESIYGSGWRTPTRSEFISLSRCSNKQLVKYN FT GIQGMWFMNSSTGLFLPAAGYRDGDKGSGTTATAYTNGTGSYYWSSDLNGNSAYGLYIL FT KNDVFVDANGNRKSGVSVRCVHNL" FT repeat_region 129406..129566 FT /note="invertible region C; active in shotgun" FT CDS 129652..129759 FT /transl_table=11 FT /locus_tag="BF9343_0123" FT /old_locus_tag="BF0124" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIX4" FT /protein_id="CAH05902.1" FT /translation="MSESLEKLTSEFLVYAEHGKVCEVNCHNSSLTEYL" FT CDS complement(129876..131108) FT /transl_table=11 FT /locus_tag="BF9343_0124" FT /old_locus_tag="BF0125" FT /product="putative transmembrane spore maturation-like FT protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3284 SWALL:AAO78390 (EMBL:AE016939) FT (410 aa) fasta scores: E(): 1e-133, 87.31% id in 410 aa, FT and N-terminus to residue 198 similar to Bacillus subtilis FT spore maturation protein A SpmA SWALL:SPMA_BACSU FT (SWALL:P35157) (196 aa) fasta scores: E(): 1.4e-24, 43.45% FT id in 191 aa, and C-terminus from residue 243 is similar to FT Bacillus subtilis spore maturation protein B SpmB FT SWALL:SPMB_BACSU (SWALL:P35158) (179 aa) fasta scores: E(): FT 1.8e-15, 38.46% id in 169 aa" FT /db_xref="GOA:Q5LIX3" FT /db_xref="InterPro:IPR011415" FT /db_xref="InterPro:IPR011642" FT /db_xref="UniProtKB/TrEMBL:Q5LIX3" FT /protein_id="CAH05903.1" FT /translation="MVLNYIWIAFFVIAFVVAVCKLLFFGDTQIFTEIINSTFDSSKTA FT FEISLGLTGVLSLWLGVMKIGENSGLINALSRWLSPVFCRLFPDIPKGHPVMGSIFMNM FT SANMLGLDNAATPMGLKAMKELQELNPKKDTASNPMIMFLVINTSGLIIIPISIMVYRA FT QMGAAQPTDIFIPILLSTFISTLVGVIAVSISQRINLINKAILTLMGCLSLFFGGIIYL FT TTTLSREEMGVYSTLIANVILFSVILLFIIAGIRKKINVYDSFVEGAKEGFTTAVRIIP FT YLVAFLVGIAVFRTSGAMDILVGGIGAIVEFCGLDTGFVGALPTALMKSLSGSGANGLM FT IDTMKQFGPDSFVGRVSCVVRGASDTTFYILAVYFGSVGITKTRNAVTCGLIADFAGII FT AAILISYLFFF" FT misc_feature complement(129882..130355) FT /note="Pfam match to entry PF03751 Spore_mat_B, Spore FT maturation protein B, score 151.2, E-value 1.6e-42" FT misc_feature complement(order(129882..129950,129969..130037, FT 130140..130208,130227..130286,130344..130412, FT 130431..130499,130527..130592,130626..130694, FT 130920..130973,131031..131099)) FT /note="10 probable transmembrane helices predicted for FT BF0125 by TMHMM2.0 at aa 4-26, 46-63, 139-161, 173-194, FT 204-226, 233-255, 275-294, 301-323, 358-380 and 387-409" FT misc_feature complement(130512..131105) FT /note="Pfam match to entry PF04291 Spore_mat_A, Spore FT maturation protein A, score 321.0, E-value 1.2e-93" FT CDS 131215..131913 FT /transl_table=11 FT /locus_tag="BF9343_0125" FT /old_locus_tag="BF0126" FT /product="conserved hypothetical protein" FT /note="Similar to Chlorobium tepidum hypothetical protein FT CT1302 SWALL:Q8KCV8 (EMBL:AE012890) (232 aa) fasta scores: FT E(): 1.4e-47, 54.62% id in 227 aa, and to Rickettsia FT conorii hypothetical protein RC0866 SWALL:Q92HA5 FT (EMBL:AE008641) (139 aa) fasta scores: E(): 7.3e-21, 43.7% FT id in 135 aa, and to Methanosarcina mazei hypothetical FT protein MM0566 SWALL:Q8PZC8 (EMBL:AE013281) (239 aa) fasta FT scores: E(): 2.4e-10, 27.38% id in 241 aa, and to FT Methanosarcina acetivorans predicted protein MA3673 FT SWALL:Q8TJV4 (EMBL:AE011076) (239 aa) fasta scores: E(): FT 1.1e-09, 28.68% id in 244 aa" FT /db_xref="GOA:Q5LIX2" FT /db_xref="InterPro:IPR014825" FT /db_xref="InterPro:IPR016024" FT /db_xref="UniProtKB/TrEMBL:Q5LIX2" FT /protein_id="CAH05904.1" FT /translation="MKAIEIQKELETYIDPVKREYLPGFFKTGKGQYGEGDRFLGIVVP FT ATRLVAKKYKNAPFEVMAELLQSEWHECRLCALLMMVERFKKSGGEEREAIYRFYLSQT FT ERINNWDLVDLSAPYIVGEYLKDKSRDDLYRLAESTLLWDQRIAVVSTVTFIRNNDFID FT ILRLSELLLQHKHDLMRKAIGWMLREMGKRDKTLLLQFLDKYSKVMPRTMLRYSIEKLT FT DEERKLYMER" FT CDS 132026..132154 FT /transl_table=11 FT /locus_tag="BF9343_0126" FT /old_locus_tag="BF0127" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIX1" FT /protein_id="CAH05905.1" FT /translation="MENFVRDISSGAAKEISCPESDNKERQICRRNLWACLSLNKA" FT CDS 132242..133270 FT /transl_table=11 FT /gene="ruvB" FT /locus_tag="BF9343_0127" FT /old_locus_tag="BF0128" FT /product="putative holliday junction DNA helicase" FT /note="Similar to Pseudomonas aeruginosa holliday junction FT DNA helicase RuvB or pa0967 SWALL:RUVB_PSEAE (SWALL:Q51426) FT (352 aa) fasta scores: E(): 7e-64, 60.31% id in 320 aa, and FT to Bacteroides thetaiotaomicron holliday junction DNA FT helicase RuvB BT3285 SWALL:AAO78391 (EMBL:AE016939) (343 FT aa) fasta scores: E(): 3.1e-110, 95.89% id in 341 aa, and FT to Chlorobium tepidum holliday junction DNA helicase RuvB FT or CT1630 SWALL:RUVB_CHLTE (SWALL:Q8KC00) (344 aa) fasta FT scores: E(): 6e-67, 61.35% id in 326 aa" FT /db_xref="GOA:Q5LIX0" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004605" FT /db_xref="InterPro:IPR008823" FT /db_xref="InterPro:IPR008824" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIX0" FT /protein_id="CAH05906.1" FT /translation="MEEDFNIRDHQLTSRERDFENALRPLSFEDFNGQDKVVDNLRIFV FT KAARLRAEALDHVLLHGPPGLGKTTLSNIIANELGVGFKVTSGPVLDKPGDLAGVLTSL FT EPNDVLFIDEIHRLSPVVEEYLYSAMEDYRIDIMIDKGPSARSIQIDLNPFTLVGATTR FT SGLLTAPLRARFGINLHLEYYDDDILSNIISRSAGILDVPCSSQAAGEIASRSRGTPRI FT ANALLRRVRDFAQVKGSGSIDTEIANYALEALNIDKYGLDEIDNKILCTIIDKFKGGPV FT GLTTIATALGEDAGTIEEVYEPFLIKEGFLKRTPRGREVTELAYKHLGRSLYNSQKTLF FT ND" FT misc_feature 132410..132949 FT /note="Pfam match to entry PF00004 AAA, ATPase family FT associated with various cellular activities (AAA), score FT 105.2, E-value 1.1e-28" FT misc_feature 132425..132448 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 133263..134795 FT /transl_table=11 FT /locus_tag="BF9343_0128" FT /old_locus_tag="BF0129" FT /product="possible polysaccharide biosynthesis FT transmembrane protein" FT /note="Similar to Leptospira interrogans hypothetical 51.3 FT kDa protein SWALL:Q8VTY3 (EMBL:AF316500) (447 aa) fasta FT scores: E(): 6.3e-05, 21.19% id in 368 aa, and to FT Bacteroides thetaiotaomicron polysaccharide biosynthesis FT protein BT3287 SWALL:AAO78393 (EMBL:AE016939) (482 aa) FT fasta scores: E(): 1.4e-82, 61.24% id in 498 aa, and to FT Chlorobium tepidum polysaccharide biosynthesis protein FT CT0273 SWALL:Q8KFP9 (EMBL:AE012806) (514 aa) fasta scores: FT E(): 3e-27, 25.91% id in 521 aa" FT /db_xref="GOA:Q5LIW9" FT /db_xref="InterPro:IPR002797" FT /db_xref="UniProtKB/TrEMBL:Q5LIW9" FT /protein_id="CAH05907.1" FT /translation="MISGNTINHKNNMAGLKSLVKDTALYGLSSMVGRFLNYLLVPLYT FT AVLPAASGGYGVVTNVYAWAGLIMVLLTFGMETGFFRFANKSEEDPVKVYANSLISVGG FT ISLIFAILCLTFLQPVSHLLEYGDHPDFIGMMIIVMALDAFLCIPFAYLRFKKRPIKFV FT AIKFVSIIANIVLNLFFLLLCPWLHEHFPAWVDWFYNPTYLVGYIFVSNLITTCLQLFC FT LIPELRGFAYRVDKQLLKRMLIYSFPILIFGLVGILNQTVDKIIYPFLFADRQEGLVQL FT GIYGAATKIAMVMAMFTQAFRYAYEPFVFGKQKEGDNRRMYAQAMKYFLIFAMFAFLVV FT MFYLDLLRYMVAPDYWAGLSVVAIVIGAEIFKGIYFNLSFWYKLIDETRWGAYFSIVGC FT VIIVGMNVMLVPTYGFVASAWASVAGYAVITILSYWIGQKKYPIHYDLKHLGTYVLFTA FT VLYVIGEWVPIENIVLRLAFRTVLLLIFMAYVVRKDLPLSQIPVINRIIKKK" FT misc_feature order(133365..133433,133443..133511,133548..133616, FT 133659..133727,133746..133814,133872..133931, FT 133989..134048,134106..134174,134247..134315, FT 134328..134396,134433..134492,134505..134573, FT 134610..134663,134676..134735) FT /note="14 probable transmembrane helices predicted for FT BF0129 by TMHMM2.0 at aa 35-57, 61-83, 96-118, 133-155, FT 162-184, 204-223, 243-262, 282-304, 329-351, 356-378, FT 391-410, 415-437, 450-467 and 472-491" FT CDS 134798..136165 FT /transl_table=11 FT /locus_tag="BF9343_0129" FT /old_locus_tag="BF0130" FT /product="conserved hypothetical transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT integral membrane protein BT3288 SWALL:AAO78394 FT (EMBL:AE016939) (451 aa) fasta scores: E(): 6.2e-143, FT 84.58% id in 454 aa, and to Leptospira interrogans FT conserved hypothetical protein la3012 SWALL:Q8F1W6 FT (EMBL:AE011464) (456 aa) fasta scores: E(): 5.8e-65, 41.59% FT id in 440 aa, and to Chlorobium tepidum membrane protein, FT putative CT0488 SWALL:Q8KF44 (EMBL:AE012825) (441 aa) fasta FT scores: E(): 1.7e-53, 39.42% id in 449 aa" FT /db_xref="GOA:Q5LIW8" FT /db_xref="InterPro:IPR005240" FT /db_xref="InterPro:IPR013031" FT /db_xref="UniProtKB/TrEMBL:Q5LIW8" FT /protein_id="CAH05908.1" FT /translation="MKADNRNIFAIKAFLREYLDLRKDKDNELATVDSIRKGVEFKGAN FT LWILIFAIFMASLGLNVNSTAVIIGAMLISPLMGPIMGVGLSVGMNDFELMKRSLKSFL FT ITTAFSVTTATVFFLFTPIAEAQSELLARTSPTIYDVFIALFGGLAGVVALSTKEKGNV FT IPGVAIATALMPPLCTAGYGLASGNLIYFLGAFYLYFINSVFISLATFIGVRLMHFQRK FT EFVDKNREKKVRKYIVLIVILTMCPAIYLTMGIIRSTFFEAAANRFVSEQLNFDNTQVL FT NKKIHYEGDSCEIRVVLIGPEVPEASIAIARSKMKDYKLENTKLIVLQGMNNNEAMDMS FT SIRAMVMEDFYKNSEQRLQEQQVKIATLQQSLERYKSYDEMSRKIIPELKVLYPSVTAL FT SISHTIETTVDSMKTDTIALAVLKFTRHPKNEEKAKISAWLQARVGAKKLRLIVEE" FT misc_feature order(134924..134983,134996..135064,135101..135169, FT 135197..135265,135284..135352,135380..135448, FT 135506..135565) FT /note="7 probable transmembrane helices predicted for FT BF0130 by TMHMM2.0 at aa 43-62, 67-89, 102-124, 134-156, FT 163-185, 195-217 and 237-256" FT misc_feature 134969..135424 FT /note="Pfam match to entry PF04087 DUF389, Domain of FT unknown function (DUF389), score 180.6, E-value 2.2e-51" FT CDS 136217..138394 FT /transl_table=11 FT /locus_tag="BF9343_0130" FT /old_locus_tag="BF0131" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3289 SWALL:AAO78395 (EMBL:AE016939) FT (713 aa) fasta scores: E(): 0, 78.12% id in 704 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT0237 SWALL:AAO75344 (EMBL:AE016926) (695 aa) fasta FT scores: E(): 1e-93, 39.54% id in 703 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT0236 FT SWALL:AAO75343 (EMBL:AE016926) (682 aa) fasta scores: E(): FT 1.4e-90, 38.86% id in 687 aa, and to Xylella fastidiosa FT hypothetical protein Xf1887 xf1887 SWALL:Q9PC94 FT (EMBL:AE004008) (716 aa) fasta scores: E(): 9.5e-60, 30.7% FT id in 723 aa" FT /db_xref="GOA:Q5LIW7" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR019500" FT /db_xref="UniProtKB/TrEMBL:Q5LIW7" FT /protein_id="CAH05909.1" FT /translation="MNKMKVITSFHNGKRWGEALFLALLLLYPVSMHADEGMWMLGNLN FT KETRKTMKELGLQMPADQLYSTRHPSLKDAVVSFGGFCSGVVVSEDGLVFTNHHCGFSS FT IQQHSSVDHDYLKDGFTAHSREEELPNPELYVRFLLRTENVTRRVLKATTPGMTESERS FT LAIDSMMVLLGDEVTKKDSTLVGIVDAYYGGNEFWLSVYRDFNDVRLVFAPPSSIGKFG FT WDTDNWMWPRHTGDFCVFRIYAGKDNRPADYSPDNVPYRPEYVAPITLDGYKEGSFCMT FT LGYPGSTERYLSSFGIEEMMNGMNQAMIDVRGVKQAIWKREMDRRDSIRIKYASKYDES FT SNYWKNSIGTNKAIRKLKVLDKKRQAEEALRQWIQKTPAEREKLLHLMSSLELNYKDRK FT EVNRAMSYFGESFINGPELVQFALTILNFDFEAEQKQVVAQLQKLLDKYANYDVSIDKE FT VFVAMLKEYRSKVDKAYLPDLYQTIDTLYGGNEQMYVDTLYAHSELTSPRGLKRFLERD FT TTFHMIDDPAVSLGIDLIVKLFDMRSQMAEASDNIEKDEREFNAAMRRMYADRNFYPDA FT NSTMRLSFGTIGSYSPYDGADYGYYTTVKGIFEKVKEHSGDPDFAVQPEVLSLLSSGDF FT GRYADTKGDMNVCFISNNDITGGNSGSAMFNGKGELLGLAFDGNWEAMSSDIVFEPDVQ FT RCIGVDVRYMLFIIEKFGKASHLIQELKIEG" FT CDS complement(138444..139307) FT /transl_table=11 FT /locus_tag="BF9343_0131" FT /old_locus_tag="BF0132" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3290 SWALL:AAO78396 (EMBL:AE016939) FT (288 aa) fasta scores: E(): 1e-82, 78.47% id in 288 aa, and FT to Bacteroides thetaiotaomicron putative integral membrane FT protein BT2248 SWALL:AAO77355 (EMBL:AE016935) (284 aa) FT fasta scores: E(): 5.5e-36, 39.32% id in 267 aa, and to FT Clostridium tetani integral membrane protein CTC01885 FT SWALL:AAO36400 (EMBL:AE015942) (299 aa) fasta scores: E(): FT 2.1e-18, 29.35% id in 293 aa" FT /db_xref="GOA:Q5LIW6" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q5LIW6" FT /protein_id="CAH05910.1" FT /translation="MNKLNGFLYGLLSSASFGLIPLFTIPAMREGMNFESILFYRFLFA FT CLALGCILLLDKQSFHIKRKEIPSLMLLAFLYLMSAVFLFWGYKFMASGVATTIHFMYP FT VLTTLIMMIFFRERKSTWRFFAIALAVVGVSCLSYGDSSGGITALGLFIVLLSALGYAL FT YLVTVSQLKIGQMKGLRLTFYVFLFGTLLLLAGIGTTTGIQTIPDWHTGGNLVLLALIP FT TVVSNLALVRAVKSIGSTLTSVLGAMEPVTAVCVGIFIFGEPFTQSIGIGILLIISAVI FT VIILKR" FT misc_feature complement(138453..138833) FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 57.2, E-value 3.1e-14" FT misc_feature complement(order(138453..138515,138528..138596, FT 138615..138683,138699..138767,138804..138872, FT 138885..138944,138963..139022,139050..139109, FT 139143..139199,139227..139295)) FT /note="10 probable transmembrane helices predicted for FT BF0132 by TMHMM2.0 at aa 5-27, 37-55, 67-86, 96-115, FT 122-141, 146-168, 181-203, 209-231, 238-260 and 265-285" FT misc_feature complement(138891..139265) FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 47.0, E-value 3.5e-11" FT CDS complement(139391..139810) FT /transl_table=11 FT /locus_tag="BF9343_0132" FT /old_locus_tag="BF0133" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIW5" FT /protein_id="CAH05911.1" FT /translation="MPAASEEETHSIGTFFIKAPVSESVGIRRGARTNYQKGTIFLSER FT SICSQITAYSKNQKGNRRILKHRILSLMQNPAIFITSTGERAEINDSEWVGKAKSQNDN FT IHRRATKSKPDLWVTNDIYLRKAVESAVNTSCDPP" FT CDS complement(140054..141997) FT /transl_table=11 FT /locus_tag="BF9343_0133" FT /old_locus_tag="BF0134" FT /product="putative RNA helicase dead-box protein" FT /note="Similar to Escherichia coli cold-shock dead-box FT protein A Dead or CsdA or MssB or B3162 SWALL:DEAD_ECOLI FT (SWALL:P23304) (628 aa) fasta scores: E(): 1.6e-51, 34.3% FT id in 618 aa, and to Bacteroides thetaiotaomicron FT ATP-dependent RNA helicase BT3303 SWALL:AAO78409 FT (EMBL:AE016940) (647 aa) fasta scores: E(): 8.8e-175, FT 84.99% id in 653 aa, and to Methanosarcina acetivorans FT ATP-dependent RNA helicase Dead or ma3956 SWALL:Q8TJ32 FT (EMBL:AE011107) (555 aa) fasta scores: E(): 3.3e-59, 38.92% FT id in 578 aa" FT /db_xref="GOA:Q5LIW4" FT /db_xref="InterPro:IPR000629" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR005580" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR012677" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014014" FT /db_xref="UniProtKB/TrEMBL:Q5LIW4" FT /protein_id="CAH05912.1" FT /translation="MHPKIKIYRDLMKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIP FT YLLGENNDVVALAQTGTGKTAAFGLPLIQKINVKNRIPQSLVLCPTRELCLQIAGDLND FT YSKYIDGLKVLPVYGGSSIDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLATVTNVVM FT DEADEMLNMGFTDSINAILADVPQERNTLLFSATMSPEIARISKNYLHNAKEITIGRKN FT ESTSNVKHVVYTVHAKDKYAALKRIVDYYPQIYGIIFCRTRKETQEIADKLMQEGYNAD FT SLHGELSQAQRDTVMQKFRIRNIQILVATDVAARGLDVDDLTHVINYGLPDDTESYTHR FT SGRTGRAGKTGTSIAIINLREKGKMREIERIIGKKFIAGEMPTGKQICEKQLLKVIDDL FT EKVKVNEEDINDFMPEIYRKLEWLSKEDLIKRMVSHEFNRFVDYYRNREEIEVPTDSRS FT ERAGKSREGKSSRQAEPGYTRLFINLGKMDNFFPHELITLLNNNTRGRVELGRIDLMKN FT FSFFEVEEKQAQNVVKALNRTNWNGRKVTVEVAGEEASTEHKGRGKRNEGNDQGGRGRS FT SAPSADRKERGKGSKDSKQADSRKGKKPSREERGYSAARGPKGKDEWKQFFKDAEPDFS FT EEGWARRKPKKS" FT misc_feature complement(140345..140599) FT /note="Pfam match to entry PF03880 DbpA, DbpA RNA binding FT domain, score 40.9, E-value 2.4e-09" FT misc_feature complement(140591..140614) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(140954..141187) FT /note="Pfam match to entry PF00271 helicase_C, Helicase FT conserved C-terminal domain, score 124.1, E-value 2.2e-34" FT misc_feature complement(141305..141922) FT /note="Pfam match to entry PF00270 DEAD, DEAD/DEAH box FT helicase, score 249.2, E-value 4.7e-72" FT misc_feature complement(141488..141514) FT /note="PS00039 DEAD-box subfamily ATP-dependent helicases FT signature." FT misc_feature complement(141803..141826) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(142059..143114) FT /transl_table=11 FT /locus_tag="BF9343_0134" FT /old_locus_tag="BF0135" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3304 SWALL:AAO78410 (EMBL:AE016940) FT (356 aa) fasta scores: E(): 4.6e-94, 68.75% id in 352 aa, FT and to Listeria innocua hypothetical protein LIN2049 FT SWALL:Q92A73 (EMBL:AL596170) (326 aa) fasta scores: E(): FT 9.1e-26, 34.36% id in 323 aa, and to Listeria monocytogenes FT hypothetical protein LMO1935 SWALL:Q8Y5X0 (EMBL:AL591981) FT (326 aa) fasta scores: E(): 2.7e-23, 32.19% id in 323 aa" FT /db_xref="GOA:Q5LIW3" FT /db_xref="InterPro:IPR000387" FT /db_xref="InterPro:IPR004861" FT /db_xref="InterPro:IPR016130" FT /db_xref="UniProtKB/TrEMBL:Q5LIW3" FT /protein_id="CAH05913.1" FT /translation="MYKNLFNLLTILLILPSCTDMSPNISVVCEENNIGNCILKWETTP FT LIKGQVKVYTSDNPEFIPEDNPVAMANISDARMTIVTNDPSRRSYYMLVFNDKYRVKVA FT PRNVNMPGIQNFRDLGGYKSATGKHVRWGKLYRSAQIDSLNCFALRKLQNLGIKTILDL FT RSESELHNTPPLQKGFNVVHIPINTGDMEHILHGIQQEKIKTDTIYHMVEAMNRELVAK FT YQKEYKEIFDILLDKNSYPVVIHCSSGKGRTGIVSALILASLDVNADIIMEDYRLSNDY FT FNIPKASKYAYNLPVNSQEAITTLFSAKEDFLNAAKDEIERKYGDVPTYLRKAIGLQSE FT DIHRLRTILLE" FT misc_feature complement(142347..142385) FT /note="PS00383 Tyrosine specific protein phosphatases FT active site." FT CDS complement(143299..144219) FT /transl_table=11 FT /gene="frk" FT /locus_tag="BF9343_0135" FT /old_locus_tag="BF0136" FT /product="putative fructokinase" FT /EC_number="2.7.1.4" FT /note="Similar to Rhizobium leguminosarum fructokinase frK FT SWALL:SCRK_RHILT (SWALL:P42720) (326 aa) fasta scores: E(): FT 4.3e-11, 25.53% id in 282 aa, and to Bacteroides FT thetaiotaomicron fructokinase BT3305 SWALL:AAO78411 FT (EMBL:AE016940) (308 aa) fasta scores: E(): 9.5e-106, FT 84.26% id in 305 aa, and to Vibrio cholerae fructokinase FT vca0656 SWALL:Q9KLT5 (EMBL:AE004395) (323 aa) fasta scores: FT E(): 4.6e-13, 25.68% id in 257 aa" FT /db_xref="GOA:Q5LIW2" FT /db_xref="InterPro:IPR002173" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:Q5LIW2" FT /protein_id="CAH05914.1" FT /translation="MRKVIGIGETILDIIFRNDQPSAAVPGGSVFNGIVSLGRMGVNVC FT FISETGNDHVGNIILQFMRDNHIPTDHVNVFPDGKSPVSLAFLNEHSDAEYIFYKDYPK FT QRLDVLFPSINEDDIIVIGSYYALNPVLRDKILELLDIAKEKRAIVYYDPNFRSSHKNE FT AMKLAPTIIENLEYADIVRGSLEDFYYMYGIKDVEKIYKDKIKFYCPLFLCTAGAERIS FT LRTNAISKEYPVAPLEAVSTIGAGDNFNAGLIYGMLKYDVRYRDLQHLSEETWDKVIQC FT GQDFAAEVCKSFNNSISGEFAANYR" FT misc_feature complement(143314..144219) FT /note="Pfam match to entry PF00294 pfkB, pfkB family FT carbohydrate kinase, score 103.8, E-value 2.9e-28" FT misc_feature complement(143458..143499) FT /note="PS00584 pfkB family of carbohydrate kinases FT signature 2." FT CDS complement(144207..144812) FT /transl_table=11 FT /locus_tag="BF9343_0136" FT /old_locus_tag="BF0137" FT /product="putative sugar isomerase SIS-domain protein" FT /note="Similar to Leptospira interrogans polysialic acid FT capsule expression protein KpsF or la0046 SWALL:Q8F9Z1 FT (EMBL:AE011196) (322 aa) fasta scores: E(): 4.2e-21, 37.24% FT id in 196 aa, and to Bacteroides thetaiotaomicron putative FT sugar isomerase BT3306 SWALL:AAO78412 (EMBL:AE016940) (201 FT aa) fasta scores: E(): 8.6e-68, 91.04% id in 201 aa, and to FT Pseudomonas putida KpsF/GutQ family protein PP0957 FT SWALL:AAN66582 (EMBL:AE016777) (324 aa) fasta scores: E(): FT 4e-25, 43.35% id in 203 aa" FT /db_xref="GOA:Q5LIW1" FT /db_xref="InterPro:IPR001347" FT /db_xref="PDB:3ETN" FT /db_xref="UniProtKB/TrEMBL:Q5LIW1" FT /protein_id="CAH05915.1" FT /translation="MIESIQELLQKEAQAVLNIPVTDAYEKAVELIVEQIHRKKGKLVT FT SGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIV FT ELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLSTGHPAEVCTLGMTPTTSTTVMTVI FT GDILVVQTMKRTEFTIEEYSKRHHGGYLGEKSRKLCVK" FT misc_feature complement(144303..144713) FT /note="Pfam match to entry PF01380 SIS, SIS domain, score FT 95.7, E-value 8.1e-26" FT CDS complement(144812..145342) FT /transl_table=11 FT /locus_tag="BF9343_0137" FT /old_locus_tag="BF0138" FT /product="putative lysine decarboxylase" FT /note="Similar to Eikenella corrodens lysine decarboxylase FT SWALL:Q9Z4R8 (EMBL:U89166) (183 aa) fasta scores: E(): FT 1.1e-14, 36.49% id in 137 aa, and to Bacteroides FT thetaiotaomicron lysine decarboxylase BT3307 SWALL:AAO78413 FT (EMBL:AE016940) (161 aa) fasta scores: E(): 2.6e-40, 72.5% FT id in 160 aa, and to Bacillus halodurans lysine FT decarboxylase BH2746 SWALL:Q9K9A3 (EMBL:AP001516) (190 aa) FT fasta scores: E(): 1.2e-17, 40.78% id in 152 aa" FT /note="unknown EC_number: ORLD" FT /db_xref="InterPro:IPR005269" FT /db_xref="UniProtKB/TrEMBL:Q5LIW0" FT /protein_id="CAH05916.1" FT /translation="MEKIGIFCSASGSIDPIYFDAAHQIGEWMGKNGKTLIYGGANLGL FT MECVAKAVKENGGHVIGVVPSKLEENGKVSTYPDEIIATHDLSDRKDIILQQSDVLVAL FT PGGIGTLDEVFHVMAAASIGYHQKKVIFYNADGFYNPLLAVLSELQARGFTRHPLSSYY FT EVANTFNELTIKI" FT misc_feature complement(144815..145207) FT /note="Pfam match to entry PF03641 Lysine_decarbox, Lysine FT decarboxylase family, score 89.1, E-value 7.7e-24" FT CDS 145471..146691 FT /transl_table=11 FT /locus_tag="BF9343_0138" FT /old_locus_tag="BF0139" FT /product="putative peptidase" FT /note="Similar to Bacteroides thetaiotaomicron putative FT zinc protease YmxG BT3308 SWALL:AAO78414 (EMBL:AE016940) FT (406 aa) fasta scores: E(): 1.4e-139, 85.71% id in 406 aa, FT and to Rickettsia conorii hypothetical zinc protease RC0293 FT rc0293 SWALL:Q92IX7 (EMBL:AE008595) (412 aa) fasta scores: FT E(): 3.2e-40, 32.59% id in 405 aa, and to Cucumis melo FT mitochondrial processing peptidase beta subunit FT SWALL:Q9AXQ2 (EMBL:AF297643) (528 aa) fasta scores: E(): FT 3.6e-25, 30% id in 400 aa, and to Blastocladiella emersonii FT mitochondrial processing peptidase beta subunit, FT mitochondrial precursor mpp1 SWALL:Q00302 (EMBL:U41300) FT (465 aa) fasta scores: E(): 1.6e-24, 25.67% id in 405 aa" FT /db_xref="GOA:Q5LIV9" FT /db_xref="InterPro:IPR001431" FT /db_xref="InterPro:IPR007863" FT /db_xref="InterPro:IPR011237" FT /db_xref="InterPro:IPR011249" FT /db_xref="InterPro:IPR011765" FT /db_xref="UniProtKB/TrEMBL:Q5LIV9" FT /protein_id="CAH05917.1" FT /translation="MQYNIHTLSNGLRIIHEPSSSKVAYCGFAVDAGTRDEAENEQGMA FT HFVEHLIFKGTRKRKAWHILNRMENVGGDLNAYTNKEETVIYSAFLTEHFGRALELLAD FT IVFHSTFPQNEIEKETEVIIDEIQSYEDTPSELIFDDFEDMIFRNHPLGRNILGRPDLL FT KKFRSEDAMAFTSRFYQPSNMVFFVLGDFNFQKIVRQVEKLLVDLPLVTVENQRTIPPL FT YVPEQLVVHKETHQAHVMIGSRGYNAYDDKRTALYLLNNILGGPGMNSRLNVSLRERRG FT LVYTVESNLTSYTDTGAFCIYFGTDPEDVDTCLKLTYKELKRMRDVKMTSSQLMAAKKQ FT LIGQIGVASDNNENNALGMAKTFLHYNKYESSESVFRRIEALTAEGLLEVANEMFAEEY FT LSTLIYR" FT misc_feature 145504..145950 FT /note="Pfam match to entry PF00675 Peptidase_M16, FT Insulinase (Peptidase family M16), score 129.9, E-value FT 3.9e-36" FT misc_feature 145567..145638 FT /note="PS00143 Insulinase family, zinc-binding region FT signature." FT misc_feature 145966..146493 FT /note="Pfam match to entry PF05193 Peptidase_M16_C, FT Peptidase M16 inactive domain, score 144.7, E-value FT 1.4e-40" FT CDS complement(146857..147243) FT /transl_table=11 FT /locus_tag="BF9343_0139" FT /old_locus_tag="BF0140" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIV8" FT /protein_id="CAH05918.1" FT /translation="MPPIMAAYIKLLMLCLLFLVFGTQKSSALQPVNNGVAVTTAVKSH FT THNVPSFDNSGHDLFDFNQGILLKKSVSDSANPYKQGNNFHPAIKTDAQRPITFKEDTS FT TYTLRNRVKPAQKYDVFALRHILI" FT misc_feature complement(147160..147243) FT /note="Signal peptide predicted for BF0140 by SignalP 2.0 FT HMM (Signal peptide probability 0.990) with cleavage site FT probability 0.823 between residues 28 and 29" FT CDS 147455..147985 FT /transl_table=11 FT /locus_tag="BF9343_0140" FT /old_locus_tag="BF0141" FT /product="possible acetyltransferase protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2051 SWALL:AAO77158 (EMBL:AE016934) FT (178 aa) fasta scores: E(): 2.7e-15, 34.28% id in 175 aa, FT and to Clostridium perfringens hypothetical protein CPE0912 FT SWALL:Q8XLX8 (EMBL:AP003188) (181 aa) fasta scores: E(): FT 2.2e-13, 36.69% id in 139 aa, and low similarity to FT Thermoanaerobacter tengcongensis acetyltransferases RimI3 FT or TTE0537 SWALL:Q8RC99 (EMBL:AE013024) (149 aa) fasta FT scores: E(): 0.00079, 26.45% id in 155 aa" FT /db_xref="GOA:Q5LIV7" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q5LIV7" FT /protein_id="CAH05919.1" FT /translation="MMTLIRITSADDSRLNRLIPLYEESFPESERRKIGQLKRMIENHA FT PMYFNAIECDGELSGMFVYWDMGDFYYLEHLAVFPEMRNKKIGQQVLDYVAEHLKGVRL FT LEVEPTEDEMTTRRVNYYRRNGYEVLDKTYVQPSYHALEDACPLWIMGSEDSPRLAEQV FT ERIKEEVYRQQVG" FT misc_feature 147602..147838 FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 34.9, E-value FT 1.6e-07" FT CDS complement(148132..149322) FT /transl_table=11 FT /gene="uxuA" FT /locus_tag="BF9343_0141" FT /old_locus_tag="BF0142" FT /product="putative mannonate dehydratase" FT /EC_number="4.2.1.8" FT /note="Similar to Escherichia coli mannonate dehydratase FT UxuA or B4322 SWALL:UXUA_ECOLI (SWALL:P24215) (394 aa) FT fasta scores: E(): 6.2e-99, 61.89% id in 391 aa, and to FT Bacteroides thetaiotaomicron mannonate dehydratase BT1432 FT SWALL:AAO76539 (EMBL:AE016931) (389 aa) fasta scores: E(): FT 8.1e-131, 81.23% id in 389 aa, and to Haemophilus FT influenzae mannonate dehydratase UxuA or hi0055 FT SWALL:UXUA_HAEIN (SWALL:P44488) (394 aa) fasta scores: E(): FT 8.2e-100, 64.12% id in 393 aa" FT /db_xref="GOA:Q5LIV6" FT /db_xref="InterPro:IPR004628" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIV6" FT /protein_id="CAH05920.1" FT /translation="MTLPKDKLFLSEQTWRWYGPDDPVSLWDIKQAGATGIVNALHHIP FT NGEVWTVEEIMKRKELIESVGLKWSVVESVPVHEHIKTQTGNFRKYIENYKESLRNLGQ FT CGIHIVTYNFMPVLDWTRTDLAYTLPDGSKALRFERAAFIAFDLFLLKRPGAETEYTDE FT EKTKARIRFEQMDEKEKQLLVRNMIAGLPGSEESFTLEQFQHELDRYRGIDAEKLRTHL FT IYFLKEITSTADEAGVKLVIHPDDPPCSILGLPRIMSCAEDFQALIDAVPNESNGLCLC FT TGSLGVSCANDLEGMMRRFGDRINFVHFRSTQRDAEGNFYEANHLEGDVDMYHVMKAFL FT ELQQRRKVSIPMRPDHGHQMVDDLKKKTNPGYSCIGRLRGLAELRGLEMGIAKSIF" FT misc_feature complement(148144..149292) FT /note="Pfam match to entry PF03786 UxuA, D-mannonate FT dehydratase (UxuA), score 716.6, E-value 9.6e-213" FT CDS complement(149437..150249) FT /transl_table=11 FT /gene="uxuB" FT /locus_tag="BF9343_0142" FT /old_locus_tag="BF0143" FT /product="putative D-mannonate oxidoreductase" FT /note="Similar to Bacillus stearothermophilus D-mannonate FT oxidoreductase UxuB SWALL:Q9ZFL6 (EMBL:AF098273) (281 aa) FT fasta scores: E(): 1.8e-20, 47.65% id in 277 aa, and to FT Bacteroides thetaiotaomicron putative oxidoreductase BT1433 FT SWALL:AAO76540 (EMBL:AE016931) (270 aa) fasta scores: E(): FT 3.4e-61, 65.92% id in 270 aa, and to Nostoc punctiforme FT oxidoreductase HrmU SWALL:Q51311 (EMBL:L37087) (278 aa) FT fasta scores: E(): 6.3e-45, 50.92% id in 271 aa" FT /db_xref="GOA:Q5LIV5" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020904" FT /db_xref="UniProtKB/TrEMBL:Q5LIV5" FT /protein_id="CAH05921.1" FT /translation="MANLFSVKDKVVVITGGTGVLGKAIAAHLAEEGAKVILLGRKTEV FT GNKIVESIRTQGGEALFLTTDVLDRKILEQNLADILKAYGRIDALLNAAGGNMPGATIS FT PTGDIFDLKIDEFQKVLDLNLTGTILPTQVFLKPMVEQRAGAIVNFSSMAAFRPLTRVA FT GYAAAKAGISNFTAFMATEIAKKFGEGIRINAIAPGFFLTEQNRALLTNPDGTYTQRGQ FT DVIRQTPFGRMGRAEELCGTIQYLISDAASFVTGTVAVVDGGFNAFAM" FT misc_feature complement(149455..150228) FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 217.7, E-value 1.5e-62" FT misc_feature complement(149710..149796) FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS complement(150378..151022) FT /transl_table=11 FT /locus_tag="BF9343_0143" FT /old_locus_tag="BF0144" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3317 SWALL:AAO78423 (EMBL:AE016940) FT (209 aa) fasta scores: E(): 1.4e-73, 83.49% id in 206 aa" FT /db_xref="InterPro:IPR014985" FT /db_xref="UniProtKB/TrEMBL:Q5LIV4" FT /protein_id="CAH05922.1" FT /translation="MKVAYLSSAYLAPVEYYSKLLNYDKIFIEQHDHYMKQTYRNRCTI FT AGPEGELALSIPIVKPEEPKCPMKDIRISDHGNWRHLHWNAIESAYNSTPFFEYYKDDF FT RPFYEKKYEFLTDFNEELCRLVCELIDIQPAIERTKEYKTDFAPNEIDFREAIHPKKDF FT HRTDPEFIPQPYYQVFEARYGFLPNLSIIDLLFNMGPESLLILQKTCADSQ" FT CDS complement(151086..152021) FT /transl_table=11 FT /locus_tag="BF9343_0144" FT /old_locus_tag="BF0145" FT /product="putative exported signal peptidase I" FT /note="Low similarity to Bradyrhizobium japonicum signal FT peptidase SipS SWALL:Q45225 (EMBL:U33883) (259 aa) fasta FT scores: E(): 0.00072, 29.68% id in 128 aa, and similar to FT Bacteroides thetaiotaomicron signal peptidase I BT3318 FT SWALL:AAO78424 (EMBL:AE016940) (312 aa) fasta scores: E(): FT 1.6e-94, 74.43% id in 309 aa, and to Bacteroides FT thetaiotaomicron signal peptidase I BT3319 SWALL:AAO78425 FT (EMBL:AE016940) (493 aa) fasta scores: E(): 1.1e-11, 25.64% FT id in 429 aa, and to Rhizobium loti signal peptidase i FT mlr7763 SWALL:Q985A7 (EMBL:AP003012) (249 aa) fasta scores: FT E(): 3.8e-07, 26.72% id in 232 aa" FT /db_xref="GOA:Q5LIV3" FT /db_xref="InterPro:IPR000223" FT /db_xref="InterPro:IPR011056" FT /db_xref="InterPro:IPR015927" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/TrEMBL:Q5LIV3" FT /protein_id="CAH05923.1" FT /translation="MGKGLKWIIAFAGAMVIVLLLRGFAFTSCLIPSAGMENSLFQGER FT ILVNKWSYGLRVPYMSLFSYHRWGESPIHKDDIVVFNNPAGIKEPVIDRREIYISRCIG FT VPGDTLLIDSLFNVVDRSTQLGPDRKQLYTYPQTKEQQLDSLLSILSIGPNELMGQHEG FT KNVRSFSRYEYYLLDQAMNGKSWIQPLQQSLQEEAKPLIVPGKGKAVRVYPWNRTLLRN FT TLVLHEGKQAEIRNDTLYIEGRPSQHCYFTKDYYWMASNNSVNLSDSRLFGFVPQDHVI FT GKASRIWFSKTDHTGIFSGYRWERFFQPVK" FT misc_feature complement(151176..152021) FT /note="Pfam match to entry PF00461 Peptidase_S26, Signal FT peptidase I, score 3.7, E-value 5e-05" FT misc_feature complement(151914..152021) FT /note="Signal peptide predicted for BF0145 by SignalP 2.0 FT HMM (Signal peptide probability 0.948) with cleavage site FT probability 0.428 between residues 36 and 37" FT CDS complement(152029..153513) FT /transl_table=11 FT /locus_tag="BF9343_0145" FT /old_locus_tag="BF0146" FT /product="possible signal peptidase" FT /note="Similar to 80 amino acids at the C-terminus of FT Escherichia coli O6 signal peptidase I LepB or C3092 FT SWALL:Q8FF16 (EMBL:AE016764) (324 aa) fasta scores: E(): FT 2.2e-06, 44.3% id in 79 aa, and to entire protein of FT Bacteroides thetaiotaomicron signal peptidase I BT3319 FT SWALL:AAO78425 (EMBL:AE016940) (493 aa) fasta scores: E(): FT 3.1e-175, 85.83% id in 494 aa, and to Chlorobium tepidum FT signal peptidase I LepB or CT1450 SWALL:Q8KCH1 FT (EMBL:AE012902) (280 aa) fasta scores: E(): 8.2e-15, 27.72% FT id in 440 aa" FT /db_xref="GOA:Q5LIV2" FT /db_xref="InterPro:IPR000223" FT /db_xref="InterPro:IPR011056" FT /db_xref="InterPro:IPR015927" FT /db_xref="InterPro:IPR019533" FT /db_xref="InterPro:IPR019758" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/TrEMBL:Q5LIV2" FT /protein_id="CAH05924.1" FT /translation="MRKATRTQWIKCSIAILLYLIFLIWVKSWWGLIVVPFIFDIYITK FT KIPWSFWKKSKNPTVRSVMSWVDAIVFALVAVYFVNIYVFQNYQIPSSSLEKSLLVGDF FT LYVSKMSYGPRVPNTPLSMPLAQHTLPILNTKSYIEWPQWKYKRVPGFGKVKLNDIVVF FT NFPAGDTVALNFQDADFYTLAYNIGKQIYPNPIDMDSLTREQQKTVYDLYYNAGRKEIL FT SNPQRYGKVVTRPVDRRENYVKRCVGLPGDTLQIINGQVMIDGKAIENPENLQFNYFVQ FT TTGPYITEEMFRELGISKADQRLTPEGAGYEEGLIELGLDGRNAQGGLNPVYHLPLTKK FT MYDTLSGNKKLVGKIVIEPEEYSGEVYPLNLNTHWNRSDYGPIWIPAKGATITLTPDNL FT PIYERCITAYEGNKLEQKEDGIYINGVKTNQYTFQMDYYWMMGDNRHNSADSRYWGFVP FT EDHVVGKPIVVWLSLDKDRNWFDGKIRWNRIFKWVD" FT misc_feature complement(152122..152202) FT /note="Pfam match to entry PF00461 Peptidase_S26, Signal FT peptidase I, score 39.7, E-value 3e-12" FT misc_feature complement(152161..152202) FT /note="PS00761 Signal peptidases I signature 3." FT misc_feature complement(152701..152799) FT /note="Pfam match to entry PF00461 Peptidase_S26, Signal FT peptidase I, score 13.8, E-value 0.00026" FT misc_feature complement(order(153259..153327,153385..153453)) FT /note="2 probable transmembrane helices predicted for FT BF0146 by TMHMM2.0 at aa 21-43 and 63-85" FT CDS complement(153518..154246) FT /transl_table=11 FT /locus_tag="BF9343_0146" FT /old_locus_tag="BF0147" FT /product="putative dihydrodipicolinate reductase" FT /EC_number="1.3.1.26" FT /note="Similar to Pseudomonas syringae dihydrodipicolinate FT reductase DapB SWALL:DAPB_PSESZ (SWALL:Q52419) (267 aa) FT fasta scores: E(): 5.8e-13, 30.71% id in 267 aa, and to FT Bacteroides thetaiotaomicron dihydrodipicolinate reductase FT BT3320 SWALL:AAO78426 (EMBL:AE016940) (254 aa) fasta FT scores: E(): 1.9e-56, 83.07% id in 254 aa, and to FT Chlorobium tepidum dihydrodipicolinate reductase DapB or FT CT1850 SWALL:Q8KBD8 (EMBL:AE012936) (249 aa) fasta scores: FT E(): 1.1e-28, 40.63% id in 251 aa" FT /db_xref="GOA:Q5LIV1" FT /db_xref="InterPro:IPR000846" FT /db_xref="InterPro:IPR011770" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR022663" FT /db_xref="InterPro:IPR023940" FT /db_xref="UniProtKB/TrEMBL:Q5LIV1" FT /protein_id="CAH05925.1" FT /translation="MKIALIGYGKMGKEIEKVALSRGHEIVSIIDINNQDDFESEAFKS FT ADVAIEFTNPMVAYSNYMKAFKAGVKLVSGSTGWMAEHGDEVKELCNKGGKTLFWSSNF FT SLGVTIFSAVNKYLAKIMNQFPAYDVTMSETHHVHKLDAPSGTAITLAEGILENMKRKS FT VWVKEEAHATNELPIHSIREGEVFGIHTIRYDSEADSISITHDAKNRGGFALGAVLAAE FT YTAAHEGYLGMSDLFPFLKD" FT misc_feature complement(153533..153928) FT /note="Pfam match to entry PF05173 DapB_C, FT Dihydrodipicolinate reductase, C-terminus, score 97.9, FT E-value 1.7e-26" FT misc_feature complement(153935..154246) FT /note="Pfam match to entry PF01113 DapB_N, FT Dihydrodipicolinate reductase, N-terminus, score 67.6, FT E-value 2.3e-17" FT CDS 154342..155610 FT /transl_table=11 FT /locus_tag="BF9343_0147" FT /old_locus_tag="BF0148" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3321 SWALL:AAO78427 (EMBL:AE016940) (427 aa) FT fasta scores: E(): 1.4e-133, 69.55% id in 427 aa" FT /db_xref="InterPro:IPR021272" FT /db_xref="UniProtKB/TrEMBL:Q5LIV0" FT /protein_id="CAH05926.1" FT /translation="MEQLLHYVWKHKIFPLHELQTTTGLPVEVIDTGLPNSDSGPDFFN FT AKLKIGGTLWVGNVEIHTASSDWFRHGHDRDIAYDSVILHIVTEIDCEIYRSNGEPVPQ FT LRLPCPEQVKEHYDELCRADIHPPCYSILETLPKLTIHSWLTALQTERFDQKNRTITRR FT LQRCNQHWEDAFFITLARNFGFGLNGDAFETWANLLSFRAIDKHRDDLTQVEAFFFGQA FT GLLEGESADDYFSWMQKEFRYLQHKFELPPVMNPSLWRFLRLRPGNFPHVRLAQLASLY FT YRERSLFSRVMEAETLKDLKHIFAGHTSAYWEEHFMFGKSSPRREKSIGAGAKELIIIN FT TVIPFLYAYGLHKADERLCERAASLLEELKAENNYVTRMWSGAGIPVQTAADSQALLQL FT QKEYCDKKKCLYCRFGYEYLRHK" FT misc_feature 154420..154455 FT /note="PS00136 Serine proteases, subtilase family, aspartic FT acid active site." FT CDS 155702..156262 FT /transl_table=11 FT /locus_tag="BF9343_0148" FT /old_locus_tag="BF0149" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3323 SWALL:AAO78429 (EMBL:AE016940) (173 aa) FT fasta scores: E(): 2.3e-51, 74.85% id in 175 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LIU9" FT /protein_id="CAH05927.1" FT /translation="MKVKRFVLCLFMLTLIGGICFISCGNTSKAKAESDVAAETAEETF FT QSFLKKFTSSASFQYTRVKFPLKTPITLMTDDGNSEKTFPFTQEKWPLLDAETLKEERI FT TQEEGGIYVSKFTVNEPTHKEFEAGYEESEVDLRVIFDLIDGKWYVTDCYTGWYGYDLP FT IDDLNETVKQVKEENDTFKELHP" FT misc_feature 155702..155797 FT /note="Signal peptide predicted for BF0149 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.496 between residues 32 and 33" FT CDS complement(156456..157388) FT /transl_table=11 FT /locus_tag="BF9343_0149" FT /old_locus_tag="BF0150" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT NifR3 family tim-barrel enzyme with dihydrouridine synthase FT domain BT3326 SWALL:AAO78432 (EMBL:AE016940) (314 aa) fasta FT scores: E(): 1.3e-83, 64.72% id in 309 aa, and to FT Clostridium perfringens probable transcriptional regulator FT CPE1275 SWALL:Q8XKW7 (EMBL:AP003189) (321 aa) fasta scores: FT E(): 2.3e-34, 33.97% id in 312 aa, and to Clostridium FT acetobutylicum predicted tim-barrel enzyme, NifR3 family FT CAC3454 SWALL:Q97DM0 (EMBL:AE007843) (311 aa) fasta scores: FT E(): 2.6e-31, 33.12% id in 314 aa" FT /db_xref="GOA:Q5LIU8" FT /db_xref="InterPro:IPR001269" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR018517" FT /db_xref="UniProtKB/TrEMBL:Q5LIU8" FT /protein_id="CAH05928.1" FT /translation="MNTLPIHLAPLQGYTEAAYRNAHAAVFGGVDVYHTPFVRIDRGEF FT RHKDVRDILPENNRVPHLIPQLIASEMDKTERIIALFIEQGYREMDINLGCPFPMLAKR FT QCGSGMLPHPDKVETLLKQIEQYPDVSFSVKMRLGWKKPDECLTLLPLLNAAPLTEIIV FT HPRLGIQQYKGEVNMEGFTAFYEACRHPVIYNGDILTIEDIRCITEKFPKLTGVMIGRG FT LLANPALGWEYKEGRKLMPEEWREKLRALHTAVFQHYETQIQGGEAQLVTKMKTFWEYL FT APQIDRKSWKAIHKSTTLAKYNIAVRSAF" FT misc_feature complement(157065..157121) FT /note="PS01136 Uncharacterized protein family UPF0034 FT signature." FT CDS complement(157395..158615) FT /transl_table=11 FT /locus_tag="BF9343_0150" FT /old_locus_tag="BF0151" FT /product="conserved hypothetical outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3325 SWALL:AAO78431 (EMBL:AE016940) (409 aa) FT fasta scores: E(): 4.5e-72, 76.29% id in 405 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LIU7" FT /protein_id="CAH05929.1" FT /translation="MKKHLILSACLIMAISSFAQKKDFSYKFYGQIRTDLYYNSRANEE FT TVDGLFYMYPKDEVFDSNGRDLNATANGSFYTLYTRLGLDVKGPKLGRAMTSAKVEADF FT RGSGTSYSTIRLRHAYLNLDWGRSALLLGQTWHPLFGDVSPQILNLSVGAPFQPFSRAP FT QIRYRYTHKGFQLTGAAIWQSQYLSQGIVGKSQTYIKNSCVPEFYLGLDYKANGWIAGA FT GIELLSLKPRTESKVEDQVYKVNERITTLSYEGHVKYSNKDWFVGAKTVLGSNLTQTSM FT LGGFGIKSIDNRTGEQKYTPIRVSSSWLNVVYGQKWKPGIFLGYVKNMGTSDALASNQV FT YGTGTNVDQVVTAGAELTYNVNHWKFGVEYTYTSAAYGSLYLKNGKIIDTHSVGNNRIV FT GVAMFMF" FT CDS 158846..159487 FT /transl_table=11 FT /locus_tag="BF9343_0151" FT /old_locus_tag="BF0152" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3335 SWALL:AAO78441 (EMBL:AE016940) (213 aa) FT fasta scores: E(): 9.1e-74, 76.99% id in 213 aa" FT /db_xref="GOA:Q5LIU6" FT /db_xref="InterPro:IPR008960" FT /db_xref="InterPro:IPR015922" FT /db_xref="UniProtKB/TrEMBL:Q5LIU6" FT /protein_id="CAH05930.1" FT /translation="MKVKKISIANVEVDALPELLDKEKIGFQPIDNVNWEAYPYRPKVE FT FRIAHSDDAVLLHFNVKEASVRAKYGEDDGSVWTDSCVEFFSVPAGDGIYYNIECNCIG FT TILIGAGAERNNRERASREVTDQVKRWASLGRQPFDERIGECNWEVALVIPYTAFFKHH FT ITSLDGKTITANFYKCGDELQTPHFLSWNPIKIEKPDFHRPDFFGTLEFE" FT CDS complement(159589..160359) FT /transl_table=11 FT /locus_tag="BF9343_0152" FT /old_locus_tag="BF0153" FT /product="putative FT acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine FT O-acyltransferase" FT /EC_number="2.3.1.129" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT and Shigella flexneri FT acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine FT O-acyltransferase LpxA or B0181 or C0218 or SF0171 FT SWALL:LPXA_ECOLI (SWALL:P10440) (262 aa) fasta scores: E(): FT 1.3e-29, 36.18% id in 257 aa, and to Bacteroides FT thetaiotaomicron UDP-N-acetylglucosamine acetyltransferase FT BT3336 SWALL:AAO78442 (EMBL:AE016940) (256 aa) fasta FT scores: E(): 1.4e-85, 83.98% id in 256 aa, and to FT Bacteroides thetaiotaomicron FT acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine FT O-acyltransferase BT4205 SWALL:AAO79310 (EMBL:AE016944) FT (255 aa) fasta scores: E(): 1.4e-46, 47.65% id in 256 aa" FT /db_xref="GOA:Q5LIU5" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR010137" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:Q5LIU5" FT /protein_id="CAH05931.1" FT /translation="MISPLASIAPGAKIGKNVIIQPFAYIEDNVEIGDDCIIMPYASVL FT NGTRLGKGNKVYQHAVLGAEPQDFHYKGEESSLIIGDNNHIRENVVISRATFGGNATKI FT GNGNFLMDKVHICHDVQIGDNCVAGIGTTIAGECTLDDCVILSGNVTLHQYCHVGQWTL FT VQSGCRISKDVPPYSIMAGNPVEYHGVNAVVLQQHKNTSERVLRHIANAYRLIYQGNFS FT LQDAVQKIIDQVPMSEEIENIVAFVKESKRGIVK" FT misc_feature complement(159880..159933) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 10.2, FT E-value 3.3" FT misc_feature complement(159952..160005) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 11.7, FT E-value 1.6" FT misc_feature complement(160006..160059) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 8.7, E-value FT 5.3" FT misc_feature complement(160078..160131) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 11.3, FT E-value 2.1" FT misc_feature complement(160168..160221) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 10.1, FT E-value 3.5" FT misc_feature complement(160222..160275) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 18.4, FT E-value 0.014" FT misc_feature complement(160276..160329) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 20.2, FT E-value 0.0043" FT CDS complement(160379..161770) FT /transl_table=11 FT /locus_tag="BF9343_0153" FT /old_locus_tag="BF0154" FT /product="putative outer membrane lipoprotein" FT /note="Similar to Escherichia coli probable outer membrane FT lipoprotein CusC precursor or IbeB or B0572 FT SWALL:CUSC_ECOLI (SWALL:P77211) (457 aa) fasta scores: E(): FT 3.7e-32, 29.5% id in 461 aa, and to Bacteroides FT thetaiotaomicron outer membrane protein OprM precursor, FT multidrug resistance protein BT3337 SWALL:AAO78443 FT (EMBL:AE016940) (461 aa) fasta scores: E(): 1.6e-127, FT 77.75% id in 463 aa, and to Bacteroides thetaiotaomicron FT multidrug efflux pump channel protein BT1965 SWALL:AAO77072 FT (EMBL:AE016934) (456 aa) fasta scores: E(): 4.2e-88, 56.37% FT id in 463 aa" FT /db_xref="GOA:Q5LIU4" FT /db_xref="InterPro:IPR003423" FT /db_xref="InterPro:IPR010131" FT /db_xref="UniProtKB/TrEMBL:Q5LIU4" FT /protein_id="CAH05932.1" FT /translation="MKKQIIGMLCATALLSSCHIYKSYDRPKDIEASGLYRDTVSVADT FT LVSDTVNFGNLPWREVFTDPQLQALIEQGLTHNTDLLTAALKVKEAQASLMSARLAYAP FT SLGLSPQGTISSFDKHAATKTYSLPATASWEIDLFGKLLNAKRGAQVTLLQTKAYRQAV FT QTQIISGIANTYYTLLMLDRQLDITEQTADIMKRNVETMQAMKDAAMFNTTSAGVEQSK FT AAYAQVLASIPAIQKSIREAENAMSMLLAQAPQTIKRGVLEEQQLPEDFSVGVPLQLLS FT NRPDVKAAEMALAGTYYNANSARAAFYPQITISGSAGWTNSAGSAIINPGKLLASVLGS FT LTQPLFYRGANIARLKIAKAQQEEAKLAFQQSLLNAGSEVSNALYQYQSASEKTASRKL FT QVESSEKASEYTKELFKLGTSTYLEVLSAEQSLLSARLSQVNDTFDRMQAVVSLYQALG FT GGRED" FT misc_feature complement(160391..160945) FT /note="Pfam match to entry PF02321 OEP, Outer membrane FT efflux protein, score 107.6, E-value 2.1e-29" FT misc_feature complement(160985..161572) FT /note="Pfam match to entry PF02321 OEP, Outer membrane FT efflux protein, score 49.1, E-value 8.5e-12" FT misc_feature complement(161702..161770) FT /note="Signal peptide predicted for BF0154 by SignalP 2.0 FT HMM (Signal peptide probability 0.848) with cleavage site FT probability 0.650 between residues 23 and 24" FT misc_feature complement(161717..161749) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(161787..164990) FT /transl_table=11 FT /locus_tag="BF9343_0154" FT /old_locus_tag="BF0155" FT /product="putative AcrB/AcrD family RND transport protein" FT /note="Similar to Pseudomonas aeruginosa RND transporter FT MexF protein SWALL:P95422 (EMBL:X99514) (1062 aa) fasta FT scores: E(): 1e-143, 39.77% id in 1056 aa, and to FT Bacteroides thetaiotaomicron AcrB/AcrD family multidrug FT resistance protein BT3338 SWALL:AAO78444 (EMBL:AE016940) FT (1071 aa) fasta scores: E(): 0, 75.91% id in 1071 aa, and FT to Bacteroides thetaiotaomicron multidrug resistance FT protein, AcrB/AcrD family BT1966 SWALL:AAO77073 FT (EMBL:AE016934) (1065 aa) fasta scores: E(): 1.5e-204, FT 55.81% id in 1066 aa" FT /db_xref="GOA:Q5LIU3" FT /db_xref="InterPro:IPR001036" FT /db_xref="InterPro:IPR004764" FT /db_xref="UniProtKB/TrEMBL:Q5LIU3" FT /protein_id="CAH05933.1" FT /translation="MKLDRFINRPVLSTVISIVIVILGVLGLLSLPISQYPDIAPPTVR FT VNTTYQGANAQTVLNSVIAPLEEQINGVENMMYMTSTATNTGEASIEVYFKQGTDPDMA FT AVNVQNRVAKAQGLLPAEVTKVGVITSKRQTSMLLVFSLYSSDDKYDNEFLENYAKINL FT VPEVQRVPGVGDAMVLGADYSMRIWLKPDVMAQYHLMPTDVSAALAEQNIEAAPGSFGE FT QGKQTFQYTLRYKGRLQSQEEFENIVIRANSDGQVLRLKDIATIELGRLTYGFSNNVNG FT HPAVTVIVFQTAGSNATAIINDILDLLEKSESTFPPGVKVNISQNANDFLFASIHEVVK FT TLIEAFILVFIVVYIFLQDLRSTLIPAIAIPVALIGTFFVLYIIGFSINLLTLCAMVLA FT IAIVVDDAIVVVEGVHAKLDQGYKSARLASIDAMNELGGAIVSITLVMMSVFIPVSFMT FT GTSGTFYRQFGLTMAIAIALSAVNALTLSPALCAILLKPHDPDAKKKSTLASRFHASFN FT AAYDTVLKKYKKRVLFFIQKPVLTIGSVVVGFALLIFLMKVTPTGLVPNEDTGTIMAVV FT DMPPGSSLERTQEVMWQVDSLLASDPAIESRTMIAGYSFIAGQGPSYGSFICKMKNWDE FT RSIAQRSDFVSGMLYLKAREVIKDARVLLFAPPMIPGYSVSNGFEMNLQDKTGGSLDKF FT YEVAQDFITKLQARPEIQSAQTSFNPNFPQYMIDIDAAACKKAGLSPSDILTTLQGYYG FT GLYSSNFNRFGKMYRVMIQADPNSRTNLESLNSVKVRNGNEMAPITQFMSVKRIYGPDN FT IKRFNMFTAMTINGSPADGYSSGQAIQAMQEVAEQTLPTGYGYEFSGMTREEQSSSGST FT TAMIFVLCFVFVYLLLSAQYESYILPFAVLLSIPFGLAGSFIFAHLMGLANNVLPILGA FT ATNNIYMQIALIMLMGLLAKNAILIVEFALDRRKMGMSITWAAVLGAGARLRPILMTSL FT AMVVGLLPLMFAMGVGANGNRALGTAAVGGMFIGMICQIFVVPALFVIFQYLQEKVKPI FT EWEDIDNTDAETEIEQYAK" FT misc_feature complement(161874..164987) FT /note="Pfam match to entry PF00873 ACR_tran, AcrB/AcrD/AcrF FT family, score 1190.2, E-value 0" FT misc_feature complement(order(161877..161945,161973..162041, FT 162111..162179,162237..162305,162324..162392, FT 163332..163400,163506..163574,163617..163685, FT 163746..163805,163833..163901,163920..163988, FT 164889..164957)) FT /note="12 probable transmembrane helices predicted for FT BF0155 by TMHMM2.0 at aa 12-34, 335-357, 364-386, 396-415, FT 436-458, 473-495, 531-553, 867-889, 896-918, 938-960, FT 984-1006 and 1016-1038" FT CDS complement(165015..166169) FT /transl_table=11 FT /locus_tag="BF9343_0155" FT /old_locus_tag="BF0156" FT /product="putative AcrA/AcrE RND transport or HlyD FT secretion family protein" FT /note="Similar to Enterobacter aerogenes EefA lipoprotein FT precursor SWALL:Q8GC84 (EMBL:AJ508047) (374 aa) fasta FT scores: E(): 5.2e-27, 33.69% id in 368 aa, and to FT Bacteroides thetaiotaomicron AcrA/AcrE family multidrug FT resistance protein BT3339 SWALL:AAO78445 (EMBL:AE016940) FT (391 aa) fasta scores: E(): 3.7e-84, 61.09% id in 383 aa, FT and to Bacteroides thetaiotaomicron multidrug efflux FT protein BT1967 SWALL:AAO77074 (EMBL:AE016934) (380 aa) FT fasta scores: E(): 2e-60, 49.18% id in 370 aa" FT /db_xref="GOA:Q5LIU2" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q5LIU2" FT /protein_id="CAH05934.1" FT /translation="MKSKIVLFAFCLALLSGCGKKGFNMGGTPECAVETLQPTTVNLKS FT SYPATIKGKQDIEIRPQVSGFITKLNIDEGSMVKKGQVLFVIDPVQYESAARAAKAAVA FT TAKANVSTQEITVKNKRELNKKNIISDYDLEMAENTLASAKAQLASAEAQLISANQNLA FT YTRVTSPSDGVAGTIPYRVGSLVSASSPSPLTVISDITQMYVYFSLTEKELLNLIRQDG FT SQTEFLNSFPAVQLTLADGTLYADSGKIETVSGVIDQNTGAVSMRATFPNHGHLLRTGG FT TGNIQIPYSKENVIVIPQKATYEIQDKKFVYLLQPDNTVKNTEIEILNLNDGQNYVVTA FT GLKAGDKIVVENVSTLKDGATIKPLTQQESAERFKAALEERKNQ" FT misc_feature complement(165120..166007) FT /note="Pfam match to entry PF00529 HlyD, HlyD family FT secretion protein, score 86.1, E-value 5.9e-23" FT misc_feature complement(165639..165890) FT /note="Pfam match to entry PF02321 OEP, Outer membrane FT efflux protein, score 20.3, E-value 6.6e-06" FT CDS complement(166478..169582) FT /transl_table=11 FT /locus_tag="BF9343_0156" FT /old_locus_tag="BF0157" FT /product="putative exported beta-galactosidase" FT /EC_number="3.2.1.23" FT /note="Similar to Thermotoga maritima beta-galactosidase FT LacZ or TM1193 SWALL:BGAL_THEMA (SWALL:Q56307) (1084 aa) FT fasta scores: E(): 3.6e-111, 39.86% id in 1016 aa, and to FT Bacteroides thetaiotaomicron beta-galactosidase BT3340 FT SWALL:AAO78446 (EMBL:AE016940) (1036 aa) fasta scores: E(): FT 0, 79.32% id in 1035 aa, and to Bacteroides FT thetaiotaomicron beta-galactosidase BT3293 SWALL:AAO78399 FT (EMBL:AE016939) (1421 aa) fasta scores: E(): 5.4e-119, FT 36.74% id in 1064 aa" FT /db_xref="GOA:Q5LIU1" FT /db_xref="InterPro:IPR004199" FT /db_xref="InterPro:IPR006101" FT /db_xref="InterPro:IPR006102" FT /db_xref="InterPro:IPR006103" FT /db_xref="InterPro:IPR006104" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR011013" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013812" FT /db_xref="InterPro:IPR014718" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR023230" FT /db_xref="UniProtKB/TrEMBL:Q5LIU1" FT /protein_id="CAH05935.1" FT /translation="MKRQLLTCCLAMCSLATMAQHDEWKNPEINAVNRAPMHTNYFAYS FT SSEEAAKADKENSSNFMTLNGIWKFNWVKNADARPTDFYRTDYNDKGWGQMKVPGVWEM FT NGYGDPIYVNVGYAWRSQYKNNPPYVPIENNHVGSYRKEIIIPAEWSGKEIFAHFGSVT FT SNMYLWVNGKYVGYSEDSKLEAEFNLTKYLKPGKNLIAFQVFRWCDGTYLEDQDFFRYS FT GVGRNCYLYSRNKKYIQDIRVTPDLDSNYTNGTLNVALNLNGSGTVELNLTDPAGKSVA FT TAQVNGNGQKSVVMDVSNPEKWTAETPNLYTLTATLKNGSNTLEVIPVKVGFRKIELKG FT GQILVNGQPVLFKGADRHEMDPDGGYVVSRERMLQDILRMKQLNINAVRTCHYPDDNLW FT YDLCDQYGIYVVAEANIESHGMGYGKETLAKNPSYKKAHMERNQRNVQRGYNHPSIIFW FT SLGNEAGYGPNFEQCYTWIKNEDKTRAVQYEQAGTNEFTDIFCPMYYDYDACKKYSEGN FT IDKPLIQCEYAHAMGNSQGGFKEYWDLIRKYPKYQGGFIWDFVDQSNHWKNKDGIDIYG FT YGGDFNKYDASDNNFNDNGLISPDRRPNPHAHEVGYFYQSIWTTPGDLSKGEIKVYNEN FT FFRDLSAYYMEWQLLANGEVMQTGVVQDLNVAPQQTATLKLNLNTEKICPCKELLLNVT FT YKLKAAETLMPAGSTVAYDQLTIRPYTAKALELKNQKASNLDIVVPVIKDNDHNYLIVE FT GENFIIEFNKHNGYLSRYEADGMQLLNPGAQLTPNFWRAPTDNDYGAGLQHRYAVWKNP FT GLKLTSLKQSIENEQAIVQAEYEMKAVKGKLFLTYVINNEGAVKVTQKMEAGKEEKVSD FT MFRFGMQMQMPENFNEVEYYGRGPVENYADRNHSTLIGKYRQTVAEQFYPYIRPQETGT FT KTDLRWWRVLNISGNGLQFVGDAPFSASALNYSIESLDDGVQKDQRHSPEVAKAPFTNL FT CIDKVQMGLGCVNSWGTLPLEKYRVPYQDYEFSFILTPVRHKVNM" FT misc_feature complement(166508..166819) FT /note="Pfam match to entry PF02930 Bgal_small_C, Beta FT galactosidase small chain, C terminal domain, score 66.6, FT E-value 4.5e-17" FT misc_feature complement(166847..167377) FT /note="Pfam match to entry PF02929 Bgal_small_N, Beta FT galactosidase small chain, N terminal domain, score 129.4, FT E-value 5.8e-36" FT misc_feature complement(167726..168577) FT /note="Pfam match to entry PF02836 Glyco_hydro_2_C, FT Glycosyl hydrolases family 2, TIM barrel domain, score FT 391.2, E-value 8.9e-115" FT misc_feature complement(168350..168427) FT /note="PS00719 Glycosyl hydrolases family 2 signature 1." FT misc_feature complement(168581..168877) FT /note="Pfam match to entry PF00703 Glyco_hydro_2, Glycosyl FT hydrolases family 2, immunoglobulin-like beta-sandwich FT domain, score 91.7, E-value 1.3e-24" FT misc_feature complement(168881..169450) FT /note="Pfam match to entry PF02837 Glyco_hydro_2_N, FT Glycosyl hydrolases family 2, sugar binding domain, score FT 184.2, E-value 1.8e-52" FT misc_feature complement(169526..169582) FT /note="Signal peptide predicted for BF0157 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.926 between residues 19 and 20" FT CDS 169688..171607 FT /transl_table=11 FT /locus_tag="BF9343_0157" FT /old_locus_tag="BF0158" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3341 SWALL:AAO78447 (EMBL:AE016940) FT (642 aa) fasta scores: E(): 1.1e-137, 73.2% id in 642 aa, FT and to Chlorobium tepidum hypothetical protein CT2013 FT SWALL:Q8KAY5 (EMBL:AE012951) (584 aa) fasta scores: E(): FT 8.5e-10, 26.41% id in 212 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LIU0" FT /protein_id="CAH05936.1" FT /translation="MDKAYFCSMLKDNIYRKKRLIRSLLGVAALVATLYSCASMGRPDG FT GPFDETPPRFIGSTPAAGAVNTKKSKIVLDFDEFIKLEKASEKVVVSPPQLQQPEIKPG FT GKRITVNLLDSLKPNTTYTIDFSDAIVDNNEGNPLGNFAFTFSTGASIDTMEVSGTLLE FT ASDLEPIKGMLVGLHSNLNDSAFTKLPFDRVARTDSRGHFTIRGIAPGKYRIFGLMDAD FT QNFFYNQKGEAVAFNDSLIIPRFEERIRQDTAWVDSLTIDTIVEQKYTYFLPDNIVLRS FT FKKPSVSQYLVKSERLTPNKFSLYFSAPADSLPVLKGLNFDEKDAFVIEKTFRNDTIHY FT WIRDSLLYQQDTLTLSLNYLYTDTLNQLVPRTDTLRLAAKKVKKEEPKKKKKKDDEPEP FT TKFLSVNTHAPSSMDVFDYITMTFEEPVARFDSAAIHLRQKVDTIWTDVPFEFEHDSLD FT VRRYNLYYDWEPGGEYEFAVDSTAFHGIYGLFTDKIKQAFKVRQIEEYGNVFLNITGAD FT SIAFVELLDNQDKVLRRRPVIDGRAEFYYLNPGKYGARLVNDTNGNGVWDAGDYEKGIQ FT PEMVYYYPHIIEFKANWDATQDWNVTAVPLDKQKPDELKKQKPDEDKKKKTRDSQNANR FT SRRN" FT CDS 171717..172424 FT /transl_table=11 FT /locus_tag="BF9343_0158" FT /old_locus_tag="BF0159" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3342 SWALL:AAO78448 (EMBL:AE016940) (259 aa) FT fasta scores: E(): 5.6e-77, 76.82% id in 233 aa" FT /db_xref="InterPro:IPR021457" FT /db_xref="UniProtKB/TrEMBL:Q5LIT9" FT /protein_id="CAH05937.1" FT /translation="MYELYFNWKFIWKKVGLASLTTNSTTYHSEPAYRVNLLAISSKEA FT DFFFKMRDTLTSVMTEKLEPRYFRKGAEEGKRYTVDEARFSFRNGMCYVNQKRVRKDGS FT ITETEQSDNRCIYDMLTILAQARSFDPKEYTIGQRIQFPMATGRRVEEQTLIYRGIKKI FT TAENDTTYRCLIFSLVEYNKKGKEKEVITFYVTDDRNHLPVRLDMHLNFGSAKAFLKSV FT SGYRHPQTSIVTK" FT CDS complement(172414..172818) FT /transl_table=11 FT /locus_tag="BF9343_0159" FT /old_locus_tag="BF0160" FT /product="putative phenylacetic acid degradation protein" FT /note="Similar to Escherichia coli phenylacetic acid FT degradation protein PaaI or B1396 SWALL:PAAI_ECOLI FT (SWALL:P76084) (140 aa) fasta scores: E(): 4.9e-12, 35.77% FT id in 123 aa, and to Bacteroides thetaiotaomicron putative FT phenylacetic acid degradation protein BT3343 SWALL:AAO78449 FT (EMBL:AE016940) (134 aa) fasta scores: E(): 3.5e-42, 87.31% FT id in 134 aa, and to Methanosarcina acetivorans FT phenylacetic acid degradation protein PaaI or ma0735 FT SWALL:Q8TSR0 (EMBL:AE010734) (146 aa) fasta scores: E(): FT 2.1e-19, 50% id in 130 aa" FT /db_xref="InterPro:IPR003736" FT /db_xref="InterPro:IPR006683" FT /db_xref="UniProtKB/TrEMBL:Q5LIT8" FT /protein_id="CAH05938.1" FT /translation="MTAQEFFKNDLFATNAGVELIEIREGYSKAKLEIKPEHLNAGQRT FT QGGAIFTLADLALAAAANSHGTLAFSLSSNITFLRASGPGDTLYAEARERYTGRSTGYY FT QIDVTDQEGRLIATFESSVFRKKDEVPFTL" FT misc_feature complement(172450..172725) FT /note="Pfam match to entry PF03061 4HBT, Thioesterase FT superfamily, score 68.4, E-value 1.3e-17" FT CDS complement(172929..174404) FT /transl_table=11 FT /gene="cysS" FT /locus_tag="BF9343_0160" FT /old_locus_tag="BF0161" FT /product="putative cysteinyl-tRNA synthetase" FT /EC_number="6.1.1.16" FT /note="Similar to Deinococcus radiodurans cysteinyl-tRNA FT synthetase CysS or dr1670 SWALL:SYC_DEIRA (SWALL:Q9RTT6) FT (498 aa) fasta scores: E(): 9.3e-82, 49.49% id in 495 aa, FT and to Bacteroides thetaiotaomicron cysteinyl-tRNA FT synthetase BT3351 SWALL:AAO78457 (EMBL:AE016940) (493 aa) FT fasta scores: E(): 2e-185, 90.06% id in 493 aa, and to FT Chlorobium tepidum cysteinyl-tRNA synthetase CysS or CT2158 FT SWALL:Q8KAK2 (EMBL:AE012964) (487 aa) fasta scores: E(): FT 6.3e-86, 48.79% id in 496 aa" FT /db_xref="GOA:Q5LIT7" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015273" FT /db_xref="InterPro:IPR015803" FT /db_xref="InterPro:IPR024909" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIT7" FT /protein_id="CAH05939.1" FT /translation="MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHAR FT PAITFDVLFRYLTRLGYKVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQY FT YLNRYHKAMEALNVLPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNK FT DYHYGKLSGRNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGW FT HAECTAMGRKYLGEHFDIHGGGMDLIFPHHECEIAQSVASQGDDMVHYWMHNNMITING FT TKMGKSLGNFITLDEFFSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKG FT LSRLMEAVDSLEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNII FT AGNNTISADDLKDLKEVFHTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKAN FT KDWATSDLIRNELTALGFEIKDTKDGFEWKLNK" FT misc_feature complement(172977..174356) FT /note="Pfam match to entry PF01406 tRNA-synt_1e, tRNA FT synthetases class I (C), score 528.1, E-value 5.3e-156" FT CDS complement(174959..175795) FT /transl_table=11 FT /locus_tag="BF9343_0161" FT /old_locus_tag="BF0163" FT /product="putative haloacid dehalogenase-like hydrolase" FT /note="Similar to Bacteroides thetaiotaomicron haloacid FT dehalogenase-like hydrolase BT3352 SWALL:AAO78458 FT (EMBL:AE016940) (270 aa) fasta scores: E(): 9.3e-70, 70.41% FT id in 267 aa, and to Bacteroides thetaiotaomicron putative FT hydrolase, haloacid dehalogenase-like hydrolase BT4699 FT SWALL:AAO79804 (EMBL:AE016946) (410 aa) fasta scores: E(): FT 1.2e-42, 48.12% id in 266 aa, and to Vibrio cholerae FT hypothetical protein Vc1364 vc1364 SWALL:Q9KS95 FT (EMBL:AE004216) (273 aa) fasta scores: E(): 3.6e-27, 35.33% FT id in 266 aa" FT /db_xref="GOA:Q5LIT6" FT /db_xref="InterPro:IPR000150" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR006379" FT /db_xref="InterPro:IPR013200" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:Q5LIT6" FT /protein_id="CAH05940.1" FT /translation="MKYKLLVLDLDGTLTNAKKEITLHNREALIRVQQQGVKLILASGR FT PTFGIVPLADELRMKEFGGFILSYNGGEIIDWSTGEIVYANVLPDEVIPRLYECATRNQ FT LPILTYDRQYIITEYPDDVYVRKEAFLNKMQIYPSTDFLKDIRLPLPKCLIVGEPHRLI FT PIEAELSVELQGQLSVYRSEPFFLELVPQGIDKAQSLSVLLNKLNMNREEMVAVGDGYN FT DLSMIQFAGLGVAMGNAQEPVKKAADYITLSNEEDGVAAVVNKFFTKAPEKGETTV" FT misc_feature complement(175076..175789) FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 49.1, E-value 8.6e-12" FT misc_feature complement(175079..175147) FT /note="PS01229 Hypothetical cof family signature 2." FT CDS complement(175859..176536) FT /transl_table=11 FT /locus_tag="BF9343_0162" FT /old_locus_tag="BF0164" FT /product="putative two-component system, response regulator FT protein" FT /note="Similar to Bacteroides fragilis transcriptional FT regulatory protein RprY SWALL:Q9AE24 (EMBL:S59000) (236 aa) FT fasta scores: E(): 1.6e-13, 30.73% id in 231 aa, and to FT Bacteroides thetaiotaomicron two-component system response FT regulator BT2165 SWALL:AAO77272 (EMBL:AE016935) (233 aa) FT fasta scores: E(): 1.4e-13, 30.73% id in 231 aa, and to FT Anabaena sp. two-component system response regulator FT ALL1964 SWALL:Q8YVL1 (EMBL:AP003587) (236 aa) fasta scores: FT E(): 2.4e-13, 31.03% id in 232 aa" FT /db_xref="GOA:Q5LIT5" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:Q5LIT5" FT /protein_id="CAH05941.1" FT /translation="MGKKLKIFFIDDDIALGHICTRIMQEEGYEVLYQTSLNGAKACIV FT ETHPDMIVLDVEIGNKNGIEAVPELKAIAPNTPILFISSHTNSQLVVQALSAGAVAYLK FT KPLEIDELIAYIKRYAISHPYQIKIGSLILDTDTQLLCTKELRVIKQLSEAEYKLLKLL FT VAYKEQLVERRQIEEELWGKVNGNEQGINNLISKLRKYLSIDPTIELVTIPRNGYKLSV FT NLS" FT misc_feature complement(175877..176104) FT /note="Pfam match to entry PF00486 trans_reg_C, FT Transcriptional regulatory protein, C terminal, score 43.1, FT E-value 5.3e-10" FT misc_feature complement(176165..176524) FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 75.2, E-value 1.1e-19" FT CDS complement(176546..177898) FT /transl_table=11 FT /locus_tag="BF9343_0163" FT /old_locus_tag="BF0165" FT /product="putative two-component regulatory system, sensor FT kinase protein" FT /note="Similar to Bacteroides fragilis sensor regulator FT protein RprX SWALL:Q08408 (EMBL:S59000) (519 aa) fasta FT scores: E(): 3.8e-14, 24.13% id in 290 aa, and to FT Bacteroides thetaiotaomicron two-component system sensor FT histidine kinase BT0733 SWALL:AAO75840 (EMBL:AE016929) (459 FT aa) fasta scores: E(): 6.4e-17, 27.54% id in 374 aa, and to FT Bacteroides thetaiotaomicron two-component system sensor FT histidine kinase BT2166 SWALL:AAO77273 (EMBL:AE016935) (515 FT aa) fasta scores: E(): 9.3e-17, 24.62% id in 333 aa" FT /db_xref="GOA:Q5LIT4" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:Q5LIT4" FT /protein_id="CAH05942.1" FT /translation="MKKELLLTILSSIALILLQVFWINSMYQKYENQYTEKINKAFFNA FT IEKEVGLRSMHIEQSKHSTIFIKSVEYMSEEERAGYKGDTIDLVHLEQNGVARNVSELL FT TQIKQDGLLAIQKPPILSIIDSLFQDELYDLNINHYITLRNKEKQIIDSVGNAHLQSHF FT QIIINQKPIGTKGLLYIQIESGLPNDTILSQMLYSLIASTLIVAIVLGCLIFQLTVIRK FT KNEILKNREASVNGIVHDLKSPLNALITLTCWLKKNESDHKKKQLMNEVIKRAKHLTTQ FT IESILICARGTTQHIILQRTKINIEEVIKTAIGNICVDLSSKPHSIEIVNESPNIECLA FT DQLYIENAIKNLIENALKYSNDGVKIQIKIVKISQGIQIEVKDNGWGIAHKYQKKIFSQ FT YYQVPRETSQIQKGYGIGLSYVKYIIQAHGGKIRLRSRENEGSTFTFYISK" FT misc_feature complement(176552..176881) FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 81.8, FT E-value 1.2e-21" FT misc_feature complement(177017..177214) FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 25.9, E-value 8.2e-05" FT misc_feature complement(order(177239..177307,177818..177886)) FT /note="2 probable transmembrane helices predicted for FT BF0165 by TMHMM2.0 at aa 5-27 and 198-220" FT CDS 178047..178241 FT /transl_table=11 FT /locus_tag="BF9343_0164" FT /old_locus_tag="BF0166" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIT3" FT /protein_id="CAH05943.1" FT /translation="MFATYPNYNKMEKILEKLSPEGMTICPTESCDPYFVGCGIDEHQG FT CNSDSFCLGDDFDHCMAMT" FT CDS 178449..179729 FT /transl_table=11 FT /locus_tag="BF9343_0165" FT /old_locus_tag="BF0167" FT /product="hypothetical Kelch-like protein" FT /note="Low similarity to Homo sapiens kelch-like protein 2 FT klhl2 SWALL:KHL2_HUMAN (SWALL:O95198) (593 aa) fasta FT scores: E(): 1.6e-06, 24.4% id in 254 aa" FT /db_xref="InterPro:IPR006652" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR011043" FT /db_xref="InterPro:IPR015915" FT /db_xref="UniProtKB/TrEMBL:Q5LIT2" FT /protein_id="CAH05944.1" FT /translation="MRSLFLIFFFCYVTGKAQDRACVVSEKDSIPLSNVYICLKDRRVI FT AISDEKGVFSLEKYDSLSLNDTLYFSHINYLHKKLSYGDLIKNRCTVFLIENNRVLEEV FT SIFSNRHLNRFLHYEILSPLKRGVYSFASVLVDGQIYIVGGSTSCGPFQSNIRSTLFWE FT KYSNMMYRYDIKQDKWETIRHKFRERAYHTAGYYDGKIFILGGKRLSETRIVDYLDNAI FT EIYDIKRDTVWTDYTNPHQATLLGSVVYKDNMIVLGGVKKVLQNNEGVYSDEMHLWNLK FT SGYWYELGKMPIRQAPETILVDHCIYLIGNRNGGGWSIECYNLLTGAWTNAGHLLYRLG FT WPSLAYHNDIIYIFEQGVVQTFNIKSRQVRSYMIDLKLKSPALYYFDGKLYILGGFYMG FT DPSRNVYSVDLKEFDKTEVDYYYNNVR" FT misc_feature 178827..179006 FT /note="Pfam match to entry PF01344 Kelch, Kelch motif, FT score 27.1, E-value 3.6e-05" FT misc_feature 179010..179168 FT /note="Pfam match to entry PF01344 Kelch, Kelch motif, FT score 20.3, E-value 0.004" FT misc_feature 179169..179324 FT /note="Pfam match to entry PF01344 Kelch, Kelch motif, FT score 16.7, E-value 0.038" FT misc_feature 179325..179456 FT /note="Pfam match to entry PF01344 Kelch, Kelch motif, FT score 9.9, E-value 0.21" FT misc_feature 179601..179684 FT /note="Pfam match to entry PF01344 Kelch, Kelch motif, FT score 8.9, E-value 0.057" FT CDS 180086..180772 FT /transl_table=11 FT /locus_tag="BF9343_0166" FT /old_locus_tag="BF0168" FT /product="putative two-component response regulator FT transcriptional regulatory protein" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT and Escherichia coli O157:H7 transcriptional regulatory FT protein CusR or B0571 or C0657 or Z0709 or ECS0609 FT SWALL:CUSR_ECOLI (SWALL:P77380) (227 aa) fasta scores: E(): FT 1.5e-32, 42.98% id in 221 aa, and to Bacteroides FT thetaiotaomicron two-component system response regulator FT BT0990 SWALL:AAO76097 (EMBL:AE016930) (228 aa) fasta FT scores: E(): 1.5e-65, 77.63% id in 228 aa, and to FT Bacteroides thetaiotaomicron two-component system response FT regulator BT0682 SWALL:AAO75789 (EMBL:AE016928) (245 aa) FT fasta scores: E(): 7e-36, 47.11% id in 225 aa" FT /db_xref="GOA:Q5LIT1" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q5LIT1" FT /protein_id="CAH05945.1" FT /translation="MYSILIIEDEQRVADLLRVGLEENGYNCLVAYDGAMGLRMFRANT FT FDLVISDIVLPKMDGFELCKEIRAANPAIPILMLTALGSTDDKLDGFDAGADDYMVKPF FT DFRELYARIRVLLKRKLAVVTDVEEELNYADLSVNLLDKSVKRAGRDIKLSPKEYNLLV FT YMIENAEKVVSRMDIADKVWNTHFDTGTNFIDVYINYLRKKIDRDFDTKLIHTKTGMGF FT ILTDKL" FT misc_feature 180089..180448 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 145.0, E-value 1.1e-40" FT misc_feature 180530..180757 FT /note="Pfam match to entry PF00486 trans_reg_C, FT Transcriptional regulatory protein, C terminal, score 67.6, FT E-value 2.3e-17" FT CDS 180769..182136 FT /transl_table=11 FT /locus_tag="BF9343_0167" FT /old_locus_tag="BF0169" FT /product="putative two-component regulator sensor kinase" FT /EC_number="2.7.3.-" FT /note="Similar to Escherichia coli sensor kinase CusS or FT b0570 SWALL:CUSS_ECOLI (SWALL:P77485) (480 aa) fasta FT scores: E(): 2.5e-19, 28.09% id in 331 aa, and to FT Bacteroides thetaiotaomicron two-component system sensor FT histidine kinase BT0989 SWALL:AAO76096 (EMBL:AE016930) (455 FT aa) fasta scores: E(): 5e-119, 69.67% id in 455 aa, and to FT Fusobacterium nucleatum two-component sensor kinase CzcS FT FN0586 SWALL:Q8R693 (EMBL:AE010570) (445 aa) fasta scores: FT E(): 8.5e-23, 28.86% id in 291 aa" FT /db_xref="GOA:Q5LIT0" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:Q5LIT0" FT /protein_id="CAH05946.1" FT /translation="MKIRSILTIKYAGITATIFLVFMATIYCVNEHLRSDSFYRSLRSE FT AITKAHLFLNNQVDVETMQSIYLNNRQFIDEVEVAVYTPDFRILYHDALHNDIIKETPG FT MIDEIVRKKEIDFRTGDYQGIGILYEFGGKNYVVTAAAYDRYGHINQVIMTRLLLLLSI FT GGLSVLVIVGYMLAKSSLAPIRSIVRKAEGITVTQIDERLPVKNEHDELGELALAFNAL FT LDRVEKTFNDQRMFVSNVSHELRTPMAALSAELDLALQKERTVTQYQNSIHNALQDSQR FT VIELIDGLLNLAKADYYPEQIKKEEIRLDELLLDANELVLKAHPDYHIELIFEQEADDD FT RVLTVIGNPYLLTTAFVNLIENNCKYSDNRTSFIQISFCDQWTIVSLSDNGAGMSETDK FT ENLFKLFYRGENKNQAQGHGIGMTLTKKILTLHKSEISVYSHQGEGTTFVIRFHHL" FT misc_feature order(180787..180855,181222..181290) FT /note="2 probable transmembrane helices predicted for FT BF0169 by TMHMM2.0 at aa 7-29 and 152-174" FT misc_feature 181240..181452 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain, score FT 54.6, E-value 1.9e-13" FT misc_feature 181462..181662 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 59.4, E-value 6.5e-15" FT misc_feature 181807..182133 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 80.3, FT E-value 3.3e-21" FT CDS 182296..184947 FT /transl_table=11 FT /gene="mgtA" FT /locus_tag="BF9343_0168" FT /old_locus_tag="BF0170" FT /product="putative Mg2+ transport ATPase protein" FT /EC_number="3.6.3.2" FT /note="Similar to Salmonella typhimurium Mg2+ transporter FT MgtA or STM4456 SWALL:ATMA_SALTY (SWALL:P36640) (902 aa) FT fasta scores: E(): 1.6e-170, 52.17% id in 874 aa, and to FT Bacteroides thetaiotaomicron Mg2+ transport ATPase protein FT B BT0988 SWALL:AAO76095 (EMBL:AE016930) (883 aa) fasta FT scores: E(): 0, 78.95% id in 884 aa, and to Escherichia FT coli, and Escherichia coli O157:H7 Mg2+ transporter MgtA or FT Mgt or CorB or B4242 or Z5853 or ECS5219 SWALL:ATMA_ECOLI FT (SWALL:P39168) (898 aa) fasta scores: E(): 1.6e-171, 52.34% FT id in 873 aa" FT /db_xref="GOA:Q5LIS9" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR004014" FT /db_xref="InterPro:IPR006415" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR018303" FT /db_xref="InterPro:IPR023214" FT /db_xref="InterPro:IPR023298" FT /db_xref="InterPro:IPR023299" FT /db_xref="InterPro:IPR023300" FT /db_xref="InterPro:IPR023306" FT /db_xref="UniProtKB/TrEMBL:Q5LIS9" FT /protein_id="CAH05947.1" FT /translation="MIWRKKEKKKAQYQFNSERVFLVATQPAKTAYSYFQTSSVGLSEE FT EIGQRQSAYGKNEISREQKKNPLVLFIRTFINPFIGVLTALAVISLVIDVVMARPEDRE FT WTAVLIIISMVVCSAILRFWQEWKASEATDSLMKMVKNTCFVKRFSGSEEVDITELVPG FT DVVCLAAGDMIPADIRIIESKDLFVSQASLTGESDPVEKFPEINGRRHSHGSVIELDNI FT CYMGSTVISGSAKGIVFGTGNDTYLGTIARSLVGERATTAFDKGISKVSFLLIRFMLVM FT VPFVFFVNGFTKGDWFEAFIFALSVAVGLTPEMLPMIVTANLSKGAVSMSKKKTVVKNL FT NAIQNFGAMNILCTDKTGTLTCDKIVLEKYINADGSDDHSRRILRHAFLNSYFQTGLKN FT LMDKAILAHVREENLEHLTEGYTKIDEIPFDFSRRRMSVVIEDQQGKRQIITKGAVEEM FT LNICSHAEFNGQVYELTDKLRSKAKRISDDMNRNGMRVLAIAQKSFISKARDFAVTDED FT EMVLIGYLAFLDPPKPSSAEAIRQLREYGIEVKILSGDNDVIVNAIARQIGIDTCHSVT FT GVELEGKDGEELREIVGQATLFSRLTPLQKSEIIMILQQNGNTVGFLGDGVNDAGALRQ FT SDIGISVDSAVDIAKESADIILLDKDLSVLKEGVLEGRKTFGNITKYIKMTASSNFGNM FT FSVMFASAFLPFLPMLPIHLLIQNLLYDISQTTIPFDRMDAEFLKQPQKWDASDLSRFM FT IYIGPISSVFDIATYCLMWYVFACNSPEHQTLFQSGWFVEGLLSQTLIVHMIRTRKIPF FT FQSRATWPVLGLTFLIMAMGIAIPFTSFGLSIGLEPLPLSYFPWLVLILVSYCVLTQFM FT KSWYIRRFSKWL" FT misc_feature 182353..182580 FT /note="Pfam match to entry PF00690 Cation_ATPase_N, Cation FT transporter/ATPase, N-terminus, score 52.3, E-value FT 9.3e-13" FT misc_feature order(182500..182568,182611..182667,183109..183168, FT 183196..183264,184363..184431,184555..184623, FT 184744..184812,184855..184923) FT /note="8 probable transmembrane helices predicted for FT BF0170 by TMHMM2.0 at aa 69-91, 106-124, 272-291, 301-323, FT 690-712, 754-776, 817-839 and 854-876" FT misc_feature 182623..183330 FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPase, score 249.9, E-value 3e-72" FT misc_feature 183340..184233 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 59.9, E-value 4.5e-15" FT misc_feature 183358..183378 FT /note="PS00154 E1-E2 ATPases phosphorylation site." FT CDS 185012..186097 FT /transl_table=11 FT /locus_tag="BF9343_0169" FT /old_locus_tag="BF0171" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIS8" FT /protein_id="CAH05948.1" FT /translation="MNYIAIVCWMLFGSVLRLCAQTCGATYITEFQYDLKKRTNWCNLL FT RLDAYVPIGTKGILEFASIHVYKTRPERIINDLQTFSNIEEDNLPCAIAVLGYTRLVGN FT VTLFAGIRNLNEDYFTTPCMSLFTNSSCGIFPTLSANYPIANYPLAALCLDYKMTLGRF FT GIESSLYNGKGYNGWSKGKHPFTFNPRKDGVFSITEINYQTEYGKCFGGFSLHTNGDMP FT DVAGEWKTREREKKVSPKMTFAWWGYAERKLWSRVRQEVNLLVQYTRTSSVFSECRNYM FT GAGVTWIYVPGGQKRHEAGLFLSAAQFKSCNEVAGEVTYRYSFNRDTYIQPAIHLIKNG FT GGLHEVFLIRMGYILNGGRVR" FT CDS 186318..187115 FT /transl_table=11 FT /locus_tag="BF9343_0170" FT /old_locus_tag="BF0172" FT /product="putative lipoprotein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIS7" FT /protein_id="CAH05949.1" FT /translation="MKTRALRSYLCFTLLATAFLLGLAGCDKEESEPLRIGDDSFNNIE FT NGVWTAYYPNTNQTSIAIYGGVKPYTVSSNSDILKVNMDKLSDAFNYETLGVGDAEVTI FT TDAKGESVGLKVKIDYRSDKMKIVKLDAYVKGDKMTVAAQKELKEKALASIPVKAGGGY FT QFIYTKDQGGIVYVYPDKYGEKYKEGTFTRSSLAVGNSSYRKYEIKLDGMERTYIVQRY FT YPSKTRSVAMVPYGFYEDLLDQFTDDYPEVESVYTMQVVSAVF" FT misc_feature 186318..186392 FT /note="Signal peptide predicted for BF0172 by SignalP 2.0 FT HMM (Signal peptide probability 0.960) with cleavage site FT probability 0.528 between residues 25 and 26" FT misc_feature 186363..186395 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(187162..190212) FT /transl_table=11 FT /locus_tag="BF9343_0171" FT /old_locus_tag="BF0173" FT /product="putative SNF family helicase" FT /note="Similar to Bacteroides thetaiotaomicron Snf2 family FT helicase BT3353 SWALL:AAO78459 (EMBL:AE016940) (1027 aa) FT fasta scores: E(): 4.1e-129, 61.8% id in 1029 aa, and to FT Chlamydia muridarum helicase, Snf2 family tc0081 FT SWALL:Q9PLL8 (EMBL:AE002276) (1181 aa) fasta scores: E(): FT 2.5e-50, 28.45% id in 970 aa, and to Chlamydia trachomatis FT Swf/Snf family helicase CT708 SWALL:O84714 (EMBL:AE001341) FT (1163 aa) fasta scores: E(): 3.2e-50, 28.35% id in 970 aa" FT /db_xref="GOA:Q5LIS6" FT /db_xref="InterPro:IPR000330" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR013663" FT /db_xref="InterPro:IPR014001" FT /db_xref="UniProtKB/TrEMBL:Q5LIS6" FT /protein_id="CAH05950.1" FT /translation="MKEALTTNQVVIVLVEHPVLGLLLVPYTVGRALDNTLEVIEQAFH FT ASPDALKKMNEAEQKAIDIASHYTEKYLMGVYSREKTVPKFLRKLTEDSNKLKQQIRPF FT IEKKLLEMLELICNGQLPFYQKPSGSKQLYEHHAYRVHPHNLKTHFSFKVTEEHFSYQL FT QCYDDDTPVSLMEQKPVVVLTSNPATLLLGMDLYTFSHIEASRLLPFTKKERISADASL FT TEKYIDNIIIPLARYHDISIQGLKVVREKRPCNAYLYLEDTIYNDTLLRLDFRYGEQSF FT SPQPSDETRKFVFREQEEEEIVIHYFQRNSTAERKAVHLLQKAGLQCISDSHFKLSSAA FT PEKNITEWISHHRQMLLEEFVLSSDTQNKPYYLPEIRIEQSCEDGPDWFDLHITVVIGN FT QRIPFSRFRKNILEGNREYILPDGHIVLLPEEWFSKYANLLEAGKESDKTIRLKRPFIG FT VIESILEKDRQSTSIKTLLSKEIPVPIGLKANLRSYQQKGFSWLANLYLEGFGGCLADD FT MGLGKTLQTLALLQYVYKPGNTTEAIRETIDLKKAESTSGCLPQKQVFFDEKGQFSLFP FT MQSKEEENSRIAPQVPQIPEPVQKQNRISPLHGTLIVVPTSLLHNWKREASRFTNLSMM FT EYNGSSPNEITRLKKYFDRYHLIFTTYGTMRNNIATLSQYTFECIVLDESQNIKNSESL FT TFRSAIQLRSRHRLILTGTPIENSLKDLWAQFHFLQPELLGNETTFSKHFINAIRQGDE FT RMKDRLRQLITPFILRRSKQEVTPELPSLTEEVVYCDMTERQNELYQHEKNSLRNILLE FT QTAEKGQQSFTVLNGILRLRQLSCHPQLFLPDFIGDSGKLYQIIETFETLRSEGHKVLI FT FSSFVKHLELVAGEFRKRKWDYAFLTGSSTNRPEEIARFNRDPKIQAFLISLKAGGVGL FT NLTQADYVFIIDPWWNPAAESQAIARAHRIGQNNQVIAYRFITQGSIEEKIIQLQEEKR FT KLAETFITDTEQLPALTNREWARLLGS" FT misc_feature complement(187330..187563) FT /note="Pfam match to entry PF00271 helicase_C, Helicase FT conserved C-terminal domain, score 75.3, E-value 1.1e-19" FT misc_feature complement(187690..188733) FT /note="Pfam match to entry PF00176 SNF2_N, SNF2 family FT N-terminal domain, score 262.4, E-value 5e-76" FT CDS 190264..191358 FT /transl_table=11 FT /locus_tag="BF9343_0172" FT /old_locus_tag="BF0174" FT /product="putative tRNA FT (5-methylaminomethyl-2-thiouridylate)-methyltransferase" FT /EC_number="2.1.1.61" FT /note="Similar to Escherichia coli tRNA FT (5-methylaminomethyl-2-thiouridylate)-methyltransferase FT tRmu or AsuE or MnmA or B1133 SWALL:TRMU_ECOLI FT (SWALL:P25745) (368 aa) fasta scores: E(): 1.4e-29, 33.69% FT id in 374 aa, and to Bacteroides thetaiotaomicron tRNA FT BT3354 SWALL:Q8A2F1 (EMBL:AE016940) (370 aa) fasta scores: FT E(): 1.2e-63, 74.18% id in 368 aa, and to Bacteroides FT thetaiotaomicron putative tRNA BT3888 SWALL:Q8A0Y3 FT (EMBL:AE016942) (351 aa) fasta scores: E(): 1.8e-50, 42.07% FT id in 347 aa" FT /db_xref="GOA:Q5LIS5" FT /db_xref="InterPro:IPR004506" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR023382" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIS5" FT /protein_id="CAH05951.1" FT /translation="MMEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGS FT TEYLEDARALAARLGIGHITYDARKVFQEQIIDYFIDEYMSGHTPVPCTLCNNQLKWPL FT LAKIADEMGIFYLATGHYVRKQWIDGNYYIAPAEDVDKDQSFFLWGLRQEILQRMLLPM FT GGMTKSEARAYAAGRGFEKVSKKKDSIGVCFCPLDYRSFLKKCLCDESGDKNRNIYRKV FT ERGRFLDESGNFIAWHEGYPFYTIGQRRGLGIQLNRAVFVKEIHPETNEVVLASLKSLE FT KSEMWLKDWNIVDESRLLGCDDVIVKIRYRKQENHCSVTITPEGLLHIRLHEPLSAIAE FT GQAAAFYKDGLLLGGGIITMTDQR" FT misc_feature 190297..191337 FT /note="Pfam match to entry PF03054 tRNA_Me_trans, tRNA FT methyl transferase, score 360.5, E-value 1.5e-105" FT CDS complement(191418..192929) FT /transl_table=11 FT /locus_tag="BF9343_0173" FT /old_locus_tag="BF0175" FT /product="putative plant auxin-regulated protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT auxin-regulated protein BT3355 SWALL:AAO78461 FT (EMBL:AE016940) (503 aa) fasta scores: E(): 4.3e-190, FT 91.01% id in 501 aa, and to Arabidopsis thaliana nt-gh3 FT deduced protein, putative f11i4_14 SWALL:Q9C736 FT (EMBL:AC073555) (525 aa) fasta scores: E(): 3.3e-10, 24.33% FT id in 522 aa, and to Clostridium acetobutylicum homolog of FT plant auxin-responsive gh3-like protein CAC3411 FT SWALL:Q97DR1 (EMBL:AE007838) (563 aa) fasta scores: E(): FT 7.3e-10, 23.92% id in 560 aa" FT /db_xref="InterPro:IPR004993" FT /db_xref="UniProtKB/TrEMBL:Q5LIS4" FT /protein_id="CAH05952.1" FT /translation="MNITKIISKVFDSRLKAIDLYDTQAGEIQHRVLTRLVKQAENTEW FT GKKYDYKSIRNYEDFKNRLPIQTYEEVKPYVERLRAGEQNLLWPSEIRWFAKSSGTTND FT KSKFLPVSKEALEDIHYRGGKDAAAIYFRMNPESRFFSGKGLILGGSHSPNLNSNHSLV FT GDLSAILIQNVSPLINLIRVPSKQIALMDEWEAKIEAIANSTIPVDVTNLSGVPSWMLV FT LIKRILEKTGKQTLEEVWPNLEVFFHGGVAFTPYREQYRQVIHSSKMHYVETYNASEGY FT FGTQNDLSDPSMLLMIDYGVFYEFIPLEDVEKENPRTYCLEEVELNKNYAMVISTSCGL FT WRYMIGDTVKFTRKNPYKFVITGRTKHFINAFGEELIVDNAEKGLAKACAETGAQVSEY FT SAAPVFMDANAKCRHQWLIEFAKMPDSIEKFAMILDATLKEVNSDYEAKRWKDIALQPL FT EVIVARKGLFHDWLAKKGKLGGQHKVPRLSNTRDYIEEMIALNER" FT misc_feature complement(191439..192893) FT /note="Pfam match to entry PF03321 GH3, GH3 FT auxin-responsive promoter, score -184.4, E-value 1.6e-08" FT CDS 193099..194109 FT /transl_table=11 FT /gene="pfkA2" FT /gene_synonym="pfk2" FT /locus_tag="BF9343_0174" FT /old_locus_tag="BF0176" FT /product="putative 6-phosphofructokinase 2" FT /EC_number="2.7.1.11" FT /note="Similar to Bacillus stearothermophilus FT 6-phosphofructokinase PfkA or Pfk SWALL:K6PF_BACST FT (SWALL:P00512) (319 aa) fasta scores: E(): 5.9e-41, 41.72% FT id in 302 aa, and to Bacteroides thetaiotaomicron FT 6-phosphofructokinase BT3356 SWALL:AAO78462 (EMBL:AE016940) FT (336 aa) fasta scores: E(): 2e-118, 93.15% id in 336 aa, FT and to Clostridium perfringens 6-phosphofructokinase PfkA FT or Pfk or CPE0361 SWALL:K6PF_CLOPE (SWALL:Q8XNH2) (319 aa) FT fasta scores: E(): 3e-41, 43.04% id in 309 aa" FT /db_xref="GOA:Q5LIS3" FT /db_xref="InterPro:IPR000023" FT /db_xref="InterPro:IPR012003" FT /db_xref="InterPro:IPR022953" FT /db_xref="UniProtKB/TrEMBL:Q5LIS3" FT /protein_id="CAH05953.1" FT /translation="MKIGILTSGGDCPGINATIRGVCKTAINHYGMEVVGIHSGFQGLL FT TKEVESFTEKSLSGLLNLGGTMLGTSREKPFRKQGIISDVDKPALIQRNIAELGLDCVV FT CIGGNGTQKTAAKFAAMGINIVSVPKTIDNDIWGTDISFGFDSAVSIATDAIDRLHSTA FT SSHKRVMVIEVMGHKAGWIALYSGMAGGGDVILVPEIPYNIKNIGDTILNRLKKGKPYS FT IVVVAEGIQTDGRKRAAEYIAQEIEYETGIETRETVLGYIQRGGSPTPFDRNLSTRMGG FT HATELIANGQFGRMIALKGDEISSVALEEVAGKLKLVTEEHDLVVQGRRMGICFG" FT misc_feature 193102..193965 FT /note="Pfam match to entry PF00365 PFK, FT Phosphofructokinase, score 327.1, E-value 1.7e-95" FT CDS complement(194128..195000) FT /transl_table=11 FT /locus_tag="BF9343_0175" FT /old_locus_tag="BF0177" FT /product="putative ribonuclease III" FT /note="Similar to Staphylococcus epidermidis RNAse III FT se0908 SWALL:Q8CPI1 (EMBL:AE016747) (245 aa) fasta scores: FT E(): 8.7e-17, 34.34% id in 230 aa, and to Bacteroides FT thetaiotaomicron ribonuclease III BT3357 SWALL:AAO78463 FT (EMBL:AE016940) (324 aa) fasta scores: E(): 4e-84, 80.76% FT id in 286 aa, and to Chlorobium tepidum ribonuclease III FT Rnc or CT2119 SWALL:RNC_CHLTE (SWALL:Q8KAN7) (272 aa) fasta FT scores: E(): 7.4e-20, 33.98% id in 256 aa" FT /db_xref="GOA:Q5LIS2" FT /db_xref="InterPro:IPR000999" FT /db_xref="InterPro:IPR001159" FT /db_xref="InterPro:IPR011907" FT /db_xref="InterPro:IPR014720" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIS2" FT /protein_id="CAH05954.1" FT /translation="MLRNKIDKIRLLFRKDRESYSCFYRILGFYPRNIRLYEQALLHKS FT TAVRSEKGRPLNNERLEFLGDAILDAIVGDIVYQHFEGKREGFLTNTRSKIVQRETLNK FT LAVEIGLDKLIKYSTRSSSHNSYMYGNAFEAFIGAIYLDRGYECCKQFMERRIIEPYID FT LDKLSRKEVNFKSKLIEWSQKNKMEVSFELIEQSLDKENNPVFQTEVRIEGILGGSGTG FT YSKKESQQNAAQMTLKKIKGDPEFMASVQEAKTQNNVPAEDTTPESETSLTAENQQIDE FT IISTEEISV" FT misc_feature complement(194281..194481) FT /note="Pfam match to entry PF00035 dsrm, Double-stranded FT RNA binding motif, score 54.7, E-value 1.7e-13" FT misc_feature complement(194566..194826) FT /note="Pfam match to entry PF00636 Ribonuclease_3, RNase3 FT domain, score 118.3, E-value 1.2e-32" FT misc_feature complement(194800..194826) FT /note="PS00517 Ribonuclease III family signature." FT CDS complement(195005..196267) FT /transl_table=11 FT /locus_tag="BF9343_0176" FT /old_locus_tag="BF0178" FT /product="putative 3-oxoacyl-[acyl-carrier-protein] FT synthase II" FT /EC_number="2.3.1.41" FT /note="Similar to Synechocystis sp. FT 3-oxoacyl-[acyl-carrier-protein] synthase II FabF or FT sll1069 SWALL:FABF_SYNY3 (SWALL:P73283) (416 aa) fasta FT scores: E(): 1.7e-76, 49.88% id in 419 aa, and to FT Bacteroides thetaiotaomicron FT 3-oxoacyl-[acyl-carrier-protein] synthase II BT3358 FT SWALL:AAO78464 (EMBL:AE016940) (420 aa) fasta scores: E(): FT 3.5e-148, 93.33% id in 420 aa, and to Chlorobium tepidum FT 3-oxoacyl- FabF or CT2118 SWALL:Q8KAN8 (EMBL:AE012960) (413 FT aa) fasta scores: E(): 1.7e-86, 58.27% id in 417 aa" FT /db_xref="GOA:Q5LIS1" FT /db_xref="InterPro:IPR000794" FT /db_xref="InterPro:IPR014030" FT /db_xref="InterPro:IPR014031" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR017568" FT /db_xref="InterPro:IPR018201" FT /db_xref="UniProtKB/TrEMBL:Q5LIS1" FT /protein_id="CAH05955.1" FT /translation="MELKRVVVTGLGAITPVGNNVPEFWENLVNGVSGAGPITHFDASQ FT FKTQFACEVKGFDATQYIDRKEARKMDLYTQYAVAVAKEAVADSGLDIENEDLNRIGVI FT FGAGIGGIRTFEEETSNYALHKENGPKYNPFFIPKMISDIAAGQISIMYGFHGPNYATC FT SACATSTNAIADAFNLIRLGKANVIVSGGSEAAIAAAGVGGFNAMHALSTRNDEPQSAS FT RPFSASRDGFVMGEGGGCLILEELEHAKARGAKIYAEVAGVGMSADAHHLTASHPEGLG FT AKLVMKNALEDAEMSPEEVDYINVHGTSTPVGDISEAKAIKEVFGEHAFELNISSTKSM FT TGHLLGAAGAVESIASILAIKNGIVPPTINHAEGDNDENIDYNLNFTFNKAQKREINVA FT LSNTFGFGGHNACVIFKKYAE" FT misc_feature complement(195011..195499) FT /note="Pfam match to entry PF02801 ketoacyl-synt_C, FT Beta-ketoacyl synthase, C-terminal domain, score 223.5, FT E-value 2.6e-64" FT misc_feature complement(195521..196261) FT /note="Pfam match to entry PF00109 ketoacyl-synt, FT Beta-ketoacyl synthase, N-terminal domain, score 263.5, FT E-value 2.4e-76" FT CDS complement(196283..196519) FT /transl_table=11 FT /gene="acpP" FT /gene_synonym="acpF" FT /locus_tag="BF9343_0177" FT /old_locus_tag="BF0179" FT /product="putative acyl carrier protein" FT /note="Similar to Azospirillum brasilense acyl carrier FT protein AcpP or AcpF SWALL:ACP_AZOBR (SWALL:P94123) (78 aa) FT fasta scores: E(): 2.4e-15, 68.42% id in 76 aa, and to FT Bacteroides thetaiotaomicron acyl carrier protein BT3359 FT SWALL:AAO78465 (EMBL:AE016940) (78 aa) fasta scores: E(): FT 5.1e-23, 94.87% id in 78 aa, and to Leucothrix mucor acyl FT carrier protein AcpP SWALL:ACP_LEUMU (SWALL:P80920) (76 aa) FT fasta scores: E(): 8.7e-14, 61.33% id in 75 aa" FT /db_xref="GOA:Q5LIS0" FT /db_xref="HSSP:1T8K" FT /db_xref="InterPro:IPR003231" FT /db_xref="InterPro:IPR006162" FT /db_xref="InterPro:IPR006163" FT /db_xref="InterPro:IPR009081" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIS0" FT /protein_id="CAH05956.1" FT /translation="MSEIASRVKAIIVDKLGVEESEVTETASFTNDLGADSLDTVELIM FT EFEKEFGISIPDDQAEKIGTVQDAVAYIEEHAK" FT misc_feature complement(196292..196339) FT /note="PS00038 Myc-type, 'helix-loop-helix' dimerization FT domain signature." FT misc_feature complement(196301..196504) FT /note="Pfam match to entry PF00550 pp-binding, FT Phosphopantetheine attachment site, score 80.9, E-value FT 2.3e-21" FT misc_feature complement(196379..196426) FT /note="PS00012 Phosphopantetheine attachment site." FT CDS 196618..197241 FT /transl_table=11 FT /gene="purN" FT /locus_tag="BF9343_0178" FT /old_locus_tag="BF0180" FT /product="putative phosphoribosylglycinamide FT formyltransferase" FT /EC_number="2.1.2.2" FT /note="Similar to Bacillus subtilis FT phosphoribosylglycinamide formyltransferase PurN FT SWALL:PUR3_BACSU (SWALL:P12040) (195 aa) fasta scores: E(): FT 3.5e-20, 40% id in 190 aa, and to Bacteroides FT thetaiotaomicron phosphoribosylglycinamide FT formyltransferase BT3360 SWALL:Q8A2E5 (EMBL:AE016940) (208 FT aa) fasta scores: E(): 1.2e-59, 74.63% id in 205 aa, and to FT Chlorobium tepidum phosphoribosylglycinamide FT formyltransferase PurN or CT0319 SWALL:Q8KFK7 FT (EMBL:AE012810) (199 aa) fasta scores: E(): 7.8e-28, 41.88% FT id in 191 aa. Possible alternative start site at codon 18." FT /db_xref="GOA:Q5LIR9" FT /db_xref="InterPro:IPR002376" FT /db_xref="InterPro:IPR004607" FT /db_xref="UniProtKB/TrEMBL:Q5LIR9" FT /protein_id="CAH05957.1" FT /translation="MQSFAHFSLFCALKGLIMGKNIAIFASGSGTNAENIIRYFEKNAS FT VRVRLVLSNRKDAYVLERACRLGVPYRAFPKSDWEAAESILDLLRKYQIDFIVLAGFLL FT RIPDALLHAYPDKIINIHPALLPKFGGKGMYGDRVHEAVVMAGESESGITIHYIDEHYD FT EGSTVFQAKCPVLPGDTPADVAKKVHALEYEWFPKIIERVVNSL" FT misc_feature 196675..197217 FT /note="Pfam match to entry PF00551 formyl_transf, Formyl FT transferase, score 187.0, E-value 2.5e-53" FT CDS complement(197279..198325) FT /transl_table=11 FT /gene="pdxB" FT /locus_tag="BF9343_0179" FT /old_locus_tag="BF0181" FT /product="putative erythronate-4-phosphate dehydrogenase" FT /note="Similar to Escherichia coli erythronate-4-phosphate FT dehydrogenase PdxB or B2320 SWALL:PDXB_ECOLI (SWALL:P05459) FT (378 aa) fasta scores: E(): 2.3e-47, 41.29% id in 356 aa, FT and to Bacteroides thetaiotaomicron erythronate-4-phosphate FT dehydrogenase BT3361 SWALL:AAO78467 (EMBL:AE016940) (348 FT aa) fasta scores: E(): 2.4e-97, 71.83% id in 348 aa, and to FT Shigella flexneri erythronate-4-phosphate dehyrogenase PdxB FT or SF2396 SWALL:AAN43909 (EMBL:AE015255) (378 aa) fasta FT scores: E(): 1.7e-48, 41.85% id in 356 aa" FT /db_xref="GOA:Q5LIR8" FT /db_xref="HSSP:1SC6" FT /db_xref="InterPro:IPR006139" FT /db_xref="InterPro:IPR006140" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020921" FT /db_xref="InterPro:IPR024531" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIR8" FT /protein_id="CAH05958.1" FT /translation="MKVIVDNKIPYIREAIEQIADEVIYVPGKDFTPELVQDADALIIR FT TRTRCDRSLLAGSKVKFIATATIGFDHIDTAYCREAGITWTNAPGCNSASVAQYIQSAL FT FILQQTRGMKLNQMTIGIVGVGNVGSKVADVARKLGIQVMLNDLPREEREESTMFASLK FT SIAEKCDIITFHVPLYKEGKYKTYHLADKHFFHSLKKGAVIMNTSRGEVIETEALLEAL FT RSGILSDAVIDVWEHEPDIDLELLEKVIIGTPHIAGYSADGKANATRMSLEALCRFFRI FT ETDYRITPPEPKNKLISTATYEEASLMIYDPRRDSDALKSHPGLFEQLRGDYPLRREEG FT AYRIVITK" FT misc_feature complement(197561..198052) FT /note="Pfam match to entry PF02826 2-Hacid_DH_C, D-isomer FT specific 2-hydroxyacid dehydrogenase, NAD binding domain, FT score 132.0, E-value 9.4e-37" FT misc_feature complement(198056..198325) FT /note="Pfam match to entry PF00389 2-Hacid_DH, D-isomer FT specific 2-hydroxyacid dehydrogenase, catalytic domain, FT score 77.5, E-value 2.4e-20" FT CDS 198458..199174 FT /transl_table=11 FT /locus_tag="BF9343_0180" FT /old_locus_tag="BF0182" FT /product="hypothetical protein" FT /note="Very low similarity to Methanosarcina mazei FT glycosyltransferase MM2109 SWALL:Q8PV65 (EMBL:AE013452) FT (297 aa) fasta scores: E(): 2, 27.15% id in 151 aa. FT Extremely low similarity to other glycosyltransferases" FT /db_xref="UniProtKB/TrEMBL:Q5LIR7" FT /protein_id="CAH05959.1" FT /translation="MKCIHIITPVKDSIELTLQTAEAILKSDFTVPFHYTIYNDFSTDE FT NTKQLKEASLKMGFELVNLSEITSHPSPNYLLVLQMAQEKAIAAEAGLLIVESDVIVKK FT HTLQSLFDGAQARKDCGIAAAVTVDEHEAINYPYLYAKGKENQVFPEKKHLSFCCSLLT FT TDFLRAFDFHSLNPEKNWFDVTISHQALEKGFVNYLFTTLTVWHRPHSSRPWKQLKYTN FT PLKYYWLKFTKGLDKI" FT CDS 199179..199892 FT /transl_table=11 FT /locus_tag="BF9343_0181" FT /old_locus_tag="BF0183" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3364 SWALL:AAO78470 (EMBL:AE016940) (247 aa) FT fasta scores: E(): 1.5e-31, 42.15% id in 223 aa" FT /db_xref="GOA:Q5LIR6" FT /db_xref="InterPro:IPR008266" FT /db_xref="InterPro:IPR010440" FT /db_xref="UniProtKB/TrEMBL:Q5LIR6" FT /protein_id="CAH05960.1" FT /translation="MTKRLTKIGVNPDFQELSSFVHELPTVFETGGKVIYKGRNELKEF FT DVEGKKLIVKSYQLPHLLNRIIYNFFRASKAKRSYSYALMLRKLGIGSPAPVGYYSTGS FT WLLFGRSYFVCLKSDCPYTYRDFEKTVFPNQEQILRAIARTTAMLHENGLLHKDYSAGN FT ILFRTIDEKVEVEIIDLNRMRFGNVGIEAGCKNFERLPGTHEMFAILAEEYAKARGFDV FT QTCLELIEQAHSLSD" FT misc_feature 199638..199676 FT /note="PS00109 Tyrosine protein kinases specific FT active-site signature." FT CDS complement(199861..200796) FT /transl_table=11 FT /locus_tag="BF9343_0182" FT /old_locus_tag="BF0184" FT /product="putative lipopolysaccharide FT 1,2-glucosyltransferase/general stress protein" FT /EC_number="2.4.1.58" FT /note="Similar to Escherichia coli lipopolysaccharide FT 1,2-glucosyltransferase RfaJ or WaaJ or B3626 FT SWALL:RFAJ_ECOLI (SWALL:P27129) (338 aa) fasta scores: E(): FT 2.2e-20, 28.66% id in 307 aa, and to Bacillus subtilis FT general stress protein A GspA or Ipa-12D SWALL:GSPA_BACSU FT (SWALL:P25148) (286 aa) fasta scores: E(): 2.1e-23, 29.03% FT id in 279 aa, and to Escherichia coli FT UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase FT WaaR SWALL:O68204 (EMBL:AF019375) (338 aa) fasta scores: FT E(): 7.4e-20, 28.33% id in 307 aa, and to Enterococcus FT faecalis general stress protein A GspA-2 or EF1811 FT SWALL:AAO81579 (EMBL:AE016952) (281 aa) fasta scores: E(): FT 1.5e-19, 30.51% id in 272 aa" FT /db_xref="GOA:Q5LIR5" FT /db_xref="InterPro:IPR002495" FT /db_xref="UniProtKB/TrEMBL:Q5LIR5" FT /protein_id="CAH05961.1" FT /translation="MIHIACNIDSNFTIHCAVTLTSLFANNRNSEFCVHIIASTLPEAD FT QKALSSIAESYGNKICFYFPEKDLLNNFSIKKSGNRISIATYYRCLLSRILPVNIDKIL FT YIDCDIVVLNDISEFWNTDITQYAIGCIEDIGSDEEEYYSRLQYDKKYSYFNAGVLLIN FT LKYWREHKIDEMCEQYFLAHSDRIRFNDQDLLNALLYKDKLFVPFRWNVQDTFYRRTYS FT HKVKEHSGLKEALLHPAILHYTNKKPWNYDSMHPLKQEYFKYLDMTPWKGTRPIIDFQT FT RVITGFKRLLYITGIKKSKYINLKDYELAQ" FT misc_feature complement(200026..200793) FT /note="Pfam match to entry PF01501 Glyco_transf_8, Glycosyl FT transferase family 8, score 188.0, E-value 1.3e-53" FT CDS complement(200824..201846) FT /transl_table=11 FT /locus_tag="BF9343_0183" FT /old_locus_tag="BF0185" FT /product="putative lipopolysaccharide core biosynthesis FT protein" FT /note="Similar to Bacteroides nodosus lipopolysaccharide FT biosynthesis LpsA protein SWALL:LPSA_BACNO (SWALL:P39907) FT (318 aa) fasta scores: E(): 8.2e-34, 35.11% id in 319 aa, FT and to Bacteroides thetaiotaomicron lipopolysaccharide core FT biosynthesis protein LpsA BT3363 SWALL:AAO78469 FT (EMBL:AE016940) (324 aa) fasta scores: E(): 1.1e-65, 57.73% FT id in 336 aa, and to Vibrio parahaemolyticus putative FT lipopolysaccharide A protein vp0191 SWALL:BAC58454 FT (EMBL:AP005073) (311 aa) fasta scores: E(): 2.1e-43, 41.35% FT id in 324 aa" FT /db_xref="InterPro:IPR006598" FT /db_xref="UniProtKB/TrEMBL:Q5LIR4" FT /protein_id="CAH05962.1" FT /translation="MGDSLVYKLRSGKPPKFIYFAYDMLKMAIPSYFYRMQLKRTIAQL FT SKRPDRAYIEERVSYYNRLSGNNHPIPQGTHVENKIRYLIYRGKLGNYKMSYFHKAYFF FT DAREYTRWFSPDLRWQYCPGDVYFTPDSPTIVKSRLLAGDNQNSVILKLDALRHFMFVN FT DKRSFTTKKDCAIFRGKIRDSRIRTQFIKMYINHPLCDCGVVGHETGIPQEWMVAKKTI FT REHLEYKFILSLEGNDVASNLKWVMSSNSIAVMTRPTCETWFMEGKLIPDYHYIEIKND FT FSDFEEKLTYYINHPEKAQQIIDHAHEYIKQFQNKKRERLISLLVLDKYFKATGQSGEM FT " FT CDS complement(201849..202652) FT /transl_table=11 FT /locus_tag="BF9343_0184" FT /old_locus_tag="BF0186" FT /product="putative glycosyltransferase" FT /note="Similar C-terminus of Campylobacter jejuni putative FT two-domain glycosyltransferase CJ1135 SWALL:Q9PNF9 FT (EMBL:AL139077) (515 aa) fasta scores: E(): 1.7e-30, 40.55% FT id in 254 aa, and to entire protein of Vibrio FT parahaemolyticus hypothetical protein VP0192 SWALL:BAC58455 FT (EMBL:AP005073) (262 aa) fasta scores: E(): 2.9e-44, 44.61% FT id in 269 aa, and to C-terminus of Campylobacter jejuni FT putative two-domain glycosyltransferase SWALL:Q938Y0 FT (EMBL:AY044868) (515 aa) fasta scores: E(): 5.4e-29, 38.4% FT id in 250 aa" FT /db_xref="GOA:Q5LIR3" FT /db_xref="InterPro:IPR001173" FT /db_xref="InterPro:IPR003859" FT /db_xref="UniProtKB/TrEMBL:Q5LIR3" FT /protein_id="CAH05963.1" FT /translation="MKTTLIISTYNRPEALSVCLDSVRFQTVMPDEVIVGDDGSTSETK FT DLIESFKKDFPVPLIHLWQEDKGFRLAMMRNKSVAAATGDYIIEIDGDIFLHNKFVEDH FT KRLAKPGHYLRGTRVNLGQKLTEEICKSKVNRRIYPWTIGIQNRAETAIHSTPVSNFFA FT DRYKKNVSSGLGCNMSFWRSDFLAINGYDEFFEGWGKEDDDLTHRLQRKGCKKRSLRFA FT GIVYHLWHGHESMESDQKNAEYFRKNNEKNIVYCENGVSKYLKQE" FT misc_feature complement(202095..202643) FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferase, score 78.5, E-value 1.2e-20" FT CDS complement(202773..203843) FT /transl_table=11 FT /locus_tag="BF9343_0185" FT /old_locus_tag="BF0187" FT /product="putative glycosyltransferase" FT /note="Similar to Lactobacillus delbrueckii FT glycosyltransferase EpsJ SWALL:Q9F0B8 (EMBL:AF267127) (327 FT aa) fasta scores: E(): 9.9e-34, 39.06% id in 256 aa, and to FT Bacteroides thetaiotaomicron putative glycosyltransferase FT YibD BT3366 SWALL:AAO78472 (EMBL:AE016940) (336 aa) fasta FT scores: E(): 5.3e-54, 43.21% id in 324 aa, and to FT Enterococcus faecalis glycosyl transferase, group 2 family FT protein EF2170 SWALL:AAO81902 (EMBL:AE016953) (324 aa) FT fasta scores: E(): 3.5e-37, 41.51% id in 277 aa" FT /db_xref="GOA:Q5LIR2" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q5LIR2" FT /protein_id="CAH05964.1" FT /translation="MEVNKPLPLISIIVPIYNIAEYASECIQSLINQTYKNIEIILVDD FT GSTDHSPAICDEFAEQDERIKVIHKRNGGLSDARNAGLDVATGEYIGFVDGDDWVDEDM FT YETLYHLIYEHQADISICTHYTELPNRTKVKYKSKKTKIFSSQKAIATLIEDKIIQNYI FT WEKLFKRELFTELRFPVGWSFEDIALCYKVFHKARKIVLLQTPKYHYRTRPGSITNSTR FT NPLKEFQYLQALHEQFQFAAENNIKVRKPKKLVQKTFHFINHIIILPPSSLKKKYINDA FT FEIAHTYDYLRNWEIGVAATLRRFFVYNYFNAYASVIITYRKYIPARTVKSTTEFFFVR FT RVATSLATAMRSILYI" FT misc_feature complement(203340..203813) FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferase, score 163.5, E-value 3.1e-46" FT CDS 204264..206099 FT /transl_table=11 FT /locus_tag="BF9343_0186" FT /old_locus_tag="BF0188" FT /product="putative transport ATP-binding protein" FT /note="Similar to Leptospira interrogans probable transport FT ATP-binding protein MsbA or la3694 SWALL:Q8F003 FT (EMBL:AE011524) (626 aa) fasta scores: E(): 1.8e-60, 36.68% FT id in 627 aa, and to Bacteroides thetaiotaomicron ABC FT transporter, ATP-binding protein BT3386 SWALL:AAO78492 FT (EMBL:AE016940) (611 aa) fasta scores: E(): 1.6e-187, FT 85.31% id in 613 aa, and to Chlorobium tepidum ABC FT transporter, ATP-binding protein CT0215 SWALL:Q8KFV5 FT (EMBL:AE012801) (620 aa) fasta scores: E(): 3.8e-68, 41.05% FT id in 531 aa. High similarity to lipid A transport FT proteins" FT /db_xref="GOA:Q5LIR1" FT /db_xref="InterPro:IPR001140" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011527" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:Q5LIR1" FT /protein_id="CAH05965.1" FT /translation="MKEFFQLMRRFVSPYKKFLGWAVFLNLLSAVFNIFSFTLLIPILQ FT ILFKMDNKVYEFIPWDAAGEGLKDIAVNNFYYYVTRMIEINGPSLTLLFLGLFLAFMTL FT LKTSCYFASSAVMIPLRTGVVRDIRIMVYSKVMSLPLGFFSEERKGDIIARMSGDVGEV FT ENSITSSLDMLIKNPILIVMYFGTLIITSWQLTLFTLLVVPGMGWIMGKVGKKLKRQSL FT EAQAKWSDTMSQLEETLGGLRIIKAFIAEQKMINRFTECSNEFRDATNRVAMRQALAHP FT MSEFLGTLLIVVVLWFGGSLILGNHSSIDAPTFIFYMVILYSVINPLKEFSKAGYNIPK FT GLASMERVDKILKAENKIVEIPNPKPLNGLEEQVEFKDISFSYDGKKEVLQHINLTVPK FT GKTVALVGQSGSGKSTLVDLLPRYHDVQEGTITIDGVNIKDVRISDLRSLIGNVNQEAI FT LFNDTFFNNIAFGVENATMEQVIEAAKIANAHDFIMEKEDGYHTNIGDRGSKLSGGQRQ FT RISIARAILKNPPILILDEATSALDTESERLVQEALERLMKTRTTIAIAHRLSTIKNAD FT EICVLYEGEIVERGKHEELLAKNGYYKRLNDMQSL" FT misc_feature 204321..205247 FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transporter transmembrane region, score 109.8, E-value FT 4.5e-30" FT misc_feature order(204324..204392,204531..204599,204801..204869, FT 205116..205175,205194..205247) FT /note="5 probable transmembrane helices predicted for FT BF0188 by TMHMM2.0 at aa 21-43, 90-112, 180-202, 285-304 FT and 311-328" FT misc_feature 205461..206015 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 190.9, E-value 1.8e-54" FT misc_feature 205482..205505 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 205794..205838 FT /note="PS00211 ABC transporters family signature." FT CDS 206102..207334 FT /transl_table=11 FT /locus_tag="BF9343_0187" FT /old_locus_tag="BF0189" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIR0" FT /protein_id="CAH05966.1" FT /translation="MTKKWQYLCRCLLVLVFIGGVIPAKAQLVERVCRTDYKISPERKG FT ELLLELDNISFFKDNEFAGTVIKGYSLPGLWIQPKFVYYPLKNIKLEGGVHMLWFSGAY FT RYPSVSYQDIALWKGEQYQKGAHLLPFFRAQISMKSVDLILGNIYGGSNHGLIAPLYNP FT ELNLTADPETGFQVLAGAPWIDLDAWIDWQSFIFRDDTHQEAFTVGLSTRFKLNAPSST FT FHCYIPLQILAQHRGGEIDTIRESSVQTLMNGAVGAGVTWNIDRRILKRVNVELDAAGY FT YQQKGELWPYHKGIGVYSSAFVDLGNFRVKMGHWICNDFITMFGIPYFGTVSTKKEGIT FT YDKPQTLFCSIEYSRMFGKHYALGLKADAYQFFPGTMRSANGELTSPGSTTSFSVGVYF FT RINPSFLLKKF" FT misc_feature 206102..206179 FT /note="Signal peptide predicted for BF0189 by SignalP 2.0 FT HMM (Signal peptide probability 0.959) with cleavage site FT probability 0.757 between residues 26 and 27" FT CDS complement(207338..207967) FT /transl_table=11 FT /gene="rnh1" FT /locus_tag="BF9343_0188" FT /old_locus_tag="BF0190" FT /product="putative ribonuclease H1" FT /note="Similar to Trypanosoma brucei ribonuclease H1 RnH1 FT SWALL:O00870 (EMBL:U74470) (301 aa) fasta scores: E(): FT 0.00053, 34% id in 100 aa, and to Bacteroides FT thetaiotaomicron ribonuclease H-related protein BT3391 FT SWALL:AAO78497 (EMBL:AE016940) (211 aa) fasta scores: E(): FT 8.5e-73, 82.93% id in 211 aa, and to Bacillus halodurans FT ribonuclease H-related protein BH0863 SWALL:Q9KEI9 FT (EMBL:AP001510) (196 aa) fasta scores: E(): 3.1e-24, 49.52% FT id in 210 aa" FT /db_xref="GOA:Q5LIQ9" FT /db_xref="InterPro:IPR002156" FT /db_xref="InterPro:IPR009027" FT /db_xref="InterPro:IPR011320" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR017290" FT /db_xref="UniProtKB/TrEMBL:Q5LIQ9" FT /protein_id="CAH05967.1" FT /translation="MGKQKFYVVWDGVTPGIYTSWTECQLQVKGYDSAKYKSFDNREEA FT ERAFAASPYAYIGKNAKKKTTGPSTEMLPAAVIENSLAVDAACSGNPGPMEYRGVHVAS FT RQEIFHFGPMKGTNNIGEFLALVHGLALLKQKGFDMPIYSDSANAISWVKQKKCKTKLS FT RTAETEALFVLIERAEKWLKENKYTTPILKWETREWGEIPADFGRK" FT CDS 208087..208689 FT /transl_table=11 FT /locus_tag="BF9343_0189" FT /old_locus_tag="BF0191" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron FT nitroreductase BT3392 SWALL:AAO78498 (EMBL:AE016940) (200 FT aa) fasta scores: E(): 5.9e-63, 78% id in 200 aa, and to FT Clostridium acetobutylicum nitroreductase family protein FT CAC3314 SWALL:Q97E06 (EMBL:AE007828) (198 aa) fasta scores: FT E(): 1.5e-47, 61.3% id in 199 aa, and to Listeria innocua FT hypothetical protein LIN2962 SWALL:Q926S9 (EMBL:AL596174) FT (199 aa) fasta scores: E(): 5.1e-40, 54% id in 200 aa" FT /db_xref="GOA:Q5LIQ8" FT /db_xref="InterPro:IPR000415" FT /db_xref="UniProtKB/TrEMBL:Q5LIQ8" FT /protein_id="CAH05968.1" FT /translation="MKKSFEEALKHRRTYYSITNQSPVSDEEIERIVNLAVTHVPSAFN FT SQSTRVVLLLGENHKKLWHIVKETLRKIVPPEVFKTTEAKIDNSFASGYGTVLFFEDQS FT VVKGLQEAFSSYKDNFPGWSLQTSAMHQLAVWTMLEDVGFGASLQHYNPLIDEEVRHTW FT HLPEEWHLIAEMPFGLPVQGPGDKDFKDLDTRVKVFK" FT repeat_region 208948..209450 FT /note="hit to rep1 6..513 score: 2303 percent id: 95.47" FT CDS 209525..210064 FT /transl_table=11 FT /locus_tag="BF9343_0190" FT /old_locus_tag="BF0192" FT /product="putative shikimate kinase" FT /EC_number="2.7.1.71" FT /note="Similar to Bacteroides thetaiotaomicron shikimate FT kinase BT3393 SWALL:Q8A2B2 (EMBL:AE016940) (175 aa) fasta FT scores: E(): 1.2e-52, 81.14% id in 175 aa, and to Bacillus FT anthracis str. Ames shikimate kinase AroK or ba4457 FT SWALL:AAP28170 (EMBL:AE017037) (165 aa) fasta scores: E(): FT 4.2e-16, 43.91% id in 148 aa, and to Anabaena sp. shikimate FT kinase Alr1244 SWALL:Q8YXG9 (EMBL:AP003585) (181 aa) fasta FT scores: E(): 2.1e-15, 37.72% id in 167 aa" FT /db_xref="GOA:Q5LIQ7" FT /db_xref="InterPro:IPR000623" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIQ7" FT /protein_id="CAH05969.1" FT /translation="MIRIFLTGYMGAGKTTLGKALARELHIPFIDLDWYIEERFHKTVG FT ELFSERGEASFRELEKNMLHEVGEFEDVVISTGGGAPCFFDNMEYMNRVGTTVFLDVDP FT KVLFSRLRVAKQQRPILQGKKDDELLDFIVQALEKRAPFYRQANYIYCADKLEDRSQIE FT TSVQQLRKLLNLHIAS" FT misc_feature 209552..210046 FT /note="Pfam match to entry PF01202 SKI, Shikimate kinase, FT score 93.5, E-value 3.6e-25" FT CDS 210211..212709 FT /transl_table=11 FT /locus_tag="BF9343_0191" FT /old_locus_tag="BF0193" FT /product="conserved hypothetical protein" FT /note="Similar to C-terminus of Encephalitozoon cuniculi FT hypothetical protein Ecu11_0430 ecu11_0430 SWALL:Q8SU70 FT (EMBL:AL590450) (590 aa) fasta scores: E(): 1.7e-30, 29.14% FT id in 470 aa, and to C-terminus of Escherichia coli O6 FT hypothetical protein c1269 SWALL:Q8FIV2 (EMBL:AE016759) FT (378 aa) fasta scores: E(): 4.2e-27, 30.8% id in 383 aa, FT and to C-terminus of Coxiella burnetii immunoreactive FT protein SWALL:Q9RN76 (EMBL:AF185288) (469 aa) fasta scores: FT E(): 6.9e-22, 29.04% id in 451 aa" FT /db_xref="GOA:Q5LIQ6" FT /db_xref="InterPro:IPR006597" FT /db_xref="InterPro:IPR011990" FT /db_xref="UniProtKB/TrEMBL:Q5LIQ6" FT /protein_id="CAH05970.1" FT /translation="METLKEKFEALAHRIQSSGKPAAAWFPQFTPVTLLNAENWWEALA FT VCEYALDTHEDEALTAGFFELIFSAYDCNVEVDLNEEEYAYWWEKVISVCDRVAVFNGA FT GWSQKGAQYSEARYGKRDLSLLFPCYEKAAEMGSPEAEATVAYWRYMGFYCEQDRAEGE FT RRFAALSSPEALLWGKYYRAYAEQHTGSKEKALLMRKELLDELPEGHRLRAHVYAAMGD FT ALDIEEGSVAEEAACYEKSLELVPNLYSLKNLATLYFRYPELGKQKELAFELWEKAWHA FT GVWSAANFLGYNYQEEEWLDMPKAIEWLEKGMLYCESYCAYELALIYLYNDEYKNVERG FT LMCLQRCVDDNYVEAIETLANVYFNGELVEENISYACQLLERAIELGSGSAAYRIGWMY FT ERGLLSEEPDYQKAMEYYEKAVSMDSADGYARAALYLANGYSGVTDAGKSKAYYEKAAE FT LGSCFAMVELAFLYENGEVVEQSYEKAFDLLQKAAGQEYPYAMYRVGLYLDRGVIGEPR FT PEEAFAWYAKAAERGDGDAIFALGRCYKNGIGTEENPDKALEWFTKGAENNEPRCLTEM FT GLAYEYGSGIEENPHQAVEYMTKAAEQNYGYAQFKMGDYFFFGYGACPEDNKQAVEWYE FT KAVANDIPLAMLRMGEYYLYDYDKLNESEKAFSYFKKAAEAECYNEGLGICYEMGIGVE FT DNETEAFKYYTLAAGSGNVMSMYRTGLCYYNGVGVKQNYTEAYRWFNDAAGNDNVASYY FT YLGKMLMYGEGCVPDAEAGLQWLMKAAEHNSDKAQFELGNAYLMGNGVEENDEIAMEWF FT EKAAENGNAKALKITGRRQR" FT misc_feature 211534..211557 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 212717..214483 FT /transl_table=11 FT /locus_tag="BF9343_0192" FT /old_locus_tag="BF0194" FT /product="putative heat-shock protein" FT /note="Similar to Leptospira interrogans heat shock protein FT HtpG HtpG1 or La1231 SWALL:Q8F6S0 (EMBL:AE011304) (603 aa) FT fasta scores: E(): 2e-63, 36.54% id in 602 aa, and to FT Listeria monocytogenes hypothetical protein LMO0942 FT SWALL:Q8Y8G2 (EMBL:AL591977) (601 aa) fasta scores: E(): FT 9.4e-47, 32.82% id in 594 aa, and to Listeria innocua FT hypothetical protein Lin0941 SWALL:Q92D78 (EMBL:AL596167) FT (564 aa) fasta scores: E(): 2e-42, 34.05% id in 552 aa" FT /db_xref="GOA:Q5LIQ5" FT /db_xref="InterPro:IPR001404" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR020568" FT /db_xref="InterPro:IPR020575" FT /db_xref="UniProtKB/TrEMBL:Q5LIQ5" FT /protein_id="CAH05971.1" FT /translation="MEKEGNNLFQVNLKGMIALLSEHIYSNPNTFVRELLQNSVDAITA FT LHNIDENYSGRIDVFLNGDGSMVFQDNGIGLKEEEVYRFLTVIGESSKRDTPDADDFIG FT RFGIGLLSCFVVTNEIRVESRSAMGGNPVCWCGKVDGTYQTTFPDEEWEIGSRVVLRPK FT NEWAHLFEYEVFKKILVNYGEVLPYPVYLHGGEEEELVNTPSPVWLDPKATRKELLDYG FT TKVFQSSALDAFPIRTEHGRIEGVLYVLPFRTQFSVRNSHKVYLKRMLLSEDDCNLLPS FT WAFFIRCLVNADGLLSTASRESFVSNDSLKDARKEIGVAIKEYLRALVQNNRSVFNKIL FT DVHHFHIKAIASEDNELLRLFMDYLPFETNKGIRSFGSIRSSNNTIYYTRNLEDFRQVR FT RIAGAQGRLVVNAAYTFDETLLKKYIRLNQELSLEEISPARLLEEFAEVEGNKEHRSFE FT TKASELLKRFGCICRLKHFTPVDTPVIFVAEEKEENSKVANNPLAAVLGSVNAKKRLPP FT TLTFNADNEMVQTLLRIQGDNKLFQHVVHILYVQSLLQGKYPVNSEEMELFNHSLSELM FT TAKMNDFINFLN" FT misc_feature 212792..213211 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 15.4, FT E-value 0.0025" FT misc_feature 213227..214468 FT /note="Pfam match to entry PF00183 HSP90, Hsp90 protein, FT score -224.5, E-value 0.00014" FT CDS 214492..215571 FT /transl_table=11 FT /locus_tag="BF9343_0193" FT /old_locus_tag="BF0195" FT /product="conserved hypothetical protein" FT /note="Similar to Leptospira interrogans conserved FT hypothetical protein La1230 SWALL:Q8F6S1 (EMBL:AE011304) FT (371 aa) fasta scores: E(): 3.1e-19, 27.64% id in 340 aa, FT and to Listeria innocua hypothetical protein Lin0939 FT SWALL:Q92D79 (EMBL:AL596167) (320 aa) fasta scores: E(): FT 3.4e-15, 28.12% id in 352 aa, and to Listeria monocytogenes FT hypothetical protein LMO0940 SWALL:Q8Y8G4 (EMBL:AL591977) FT (320 aa) fasta scores: E(): 3.9e-15, 31.66% id in 240 aa" FT /db_xref="GOA:Q5LIQ4" FT /db_xref="InterPro:IPR011990" FT /db_xref="UniProtKB/TrEMBL:Q5LIQ4" FT /protein_id="CAH05972.1" FT /translation="MKYTLEIQKLLLQAQNDNLHPREKANLLREAIRIADENEDVQWAV FT EMRLDLIYELNLLSADAEEIAVFSKILDSYENHKDQINEDDILWKYKWIWSCTFDLPSI FT PMEQVEAVGEDYKTRILRNGYSLRTYYHRLSVEYTKMREYAKAKECIDKMLAEKMDDLT FT CEACELNFMLDYYLETGQFEEAYNRAQPLITRQVSCYEANLRAYMKLAYYACKAGKPEI FT AADMCARAEEALVGREKDEYLLLYLGLFIAYYFMTHPDRGWEYAERCIPWSLNTNMQKK FT YRFSCDMVEALSYESREEVSLSLPEEFPLYRADGIYSVAALRDYFYKQATQLASLYDTR FT NGNNGYQERLFNVNLIGNL" FT CDS 215629..217521 FT /transl_table=11 FT /locus_tag="BF9343_0194" FT /old_locus_tag="BF0196" FT /product="putative arginine decarboxylase" FT /EC_number="4.1.1.19" FT /note="Similar to Escherichia coli biosynthetic arginine FT decarboxylase SpeA or B2938 SWALL:SPEA_ECOLI (SWALL:P21170) FT (658 aa) fasta scores: E(): 1.7e-101, 45.15% id in 629 aa, FT and to Bacteroides thetaiotaomicron putative arginine FT decarboxylase BT3394 SWALL:AAO78500 (EMBL:AE016940) (630 FT aa) fasta scores: E(): 0, 95.39% id in 630 aa, and to FT Synechococcus elongatus arginine decarboxylase tll1807 FT SWALL:Q8DHY6 (EMBL:AP005375) (637 aa) fasta scores: E(): FT 3.1e-114, 46.09% id in 627 aa" FT /db_xref="GOA:Q5LIQ3" FT /db_xref="InterPro:IPR000183" FT /db_xref="InterPro:IPR002985" FT /db_xref="InterPro:IPR009006" FT /db_xref="InterPro:IPR022643" FT /db_xref="InterPro:IPR022644" FT /db_xref="InterPro:IPR022653" FT /db_xref="InterPro:IPR022657" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIQ3" FT /protein_id="CAH05973.1" FT /translation="MRKWRIEDSEELYNITGWGTSYFGINDKGHVVVTPRKDGVAVDLK FT ELVDELQLRDVAAPMLVRFPDILDNRIEKTAYCFKQASEEYGYKAQNFIIYPIKVNQMR FT PVVEEIISHGKKFNLGLEAGSKPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQKM FT GKRIFLVVEKMNELKLIARMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSS FT ELLEALDFLESKGMKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHAMGFNVEFV FT DIGGGLGVDYDGTRSSSSESSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRAL FT TAHHSVLIFEVLETATLPQWDDEEEIAPDAHELVQELYGIWDTLNQNKMLEAWHDAQQI FT REEALDLFSHGIVDLKTRAQIERLYWSITREINQIAGGLKHAPDEFRGLSKLLADKYFC FT NFSLFQSLPDSWAIDQIFPIMPIQRLDEKPDRSATLQDITCDSDGKIANFISTRNVAHY FT MPVHSLKQKEPYYVAVFLVGAYQEILGDMHNLFGDTNAVHVSVNEKGYNIEQIIDGETV FT AEVLDYVQYSPKKLVRTLETWVTKSVKEGKISVEEGKEFLSNYRSGLYGYTYLE" FT misc_feature 215824..216657 FT /note="Pfam match to entry PF02784 Orn_Arg_deC_N, FT Pyridoxal-dependent decarboxylase, pyridoxal binding FT domain, score 213.9, E-value 2e-61" FT misc_feature 215914..215970 FT /note="PS00878 Orn/DAP/Arg decarboxylases family 2 FT pyridoxal-P attachment site." FT misc_feature 216451..216492 FT /note="PS00879 Orn/DAP/Arg decarboxylases family 2 FT signature 2." FT misc_feature 216664..217305 FT /note="Pfam match to entry PF00278 Orn_DAP_Arg_deC, FT Pyridoxal-dependent decarboxylase, C-terminal sheet domain, FT score 39.6, E-value 9.1e-10" FT CDS 217649..218434 FT /transl_table=11 FT /locus_tag="BF9343_0195" FT /old_locus_tag="BF0197" FT /product="putative acetylglutamate kinase" FT /note="Similar to Campylobacter jejuni acetylglutamate FT kinase ArgB or CJ0226 SWALL:ARGB_CAMJE (SWALL:Q9PIR8) (281 FT aa) fasta scores: E(): 2.5e-20, 34.78% id in 253 aa, and to FT Bacteroides thetaiotaomicron putative acetylglutamate FT kinase BT3395 SWALL:AAO78501 (EMBL:AE016940) (257 aa) fasta FT scores: E(): 1.5e-82, 91.05% id in 257 aa, and to FT Methanopyrus kandleri acetylglutamate kinase ArgB or mk1631 FT SWALL:ARGB_METKA (SWALL:Q8TUX2) (246 aa) fasta scores: E(): FT 3.7e-28, 40.23% id in 256 aa" FT /db_xref="GOA:Q5LIQ2" FT /db_xref="HSSP:2BUF" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR004662" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIQ2" FT /protein_id="CAH05974.1" FT /translation="MKEKMKEKLTVIKVGGKIVEEEATLNQLLNDFAAIEGHKVLVHGG FT GRSATKIAAQLGIDSKMVNGRRITDAETLKVVTMVYGGLVNKNIVAGLQARGVNALGLT FT GADMNVIRSMKRPVKEVDYGFVGDVERVDSTLLSDLIHKGVVPVMAPLTHDGQGNMLNT FT NADTIAGETAKALSAIFDVTLVYCFEKKGVLRDENDDESVIPQINHAEFQRYIAEGVIQ FT GGMIPKLENSFEAINAGVSEVVITLASAIHTDGGTRIKK" FT misc_feature 217670..218389 FT /note="Pfam match to entry PF00696 aakinase, Amino acid FT kinase family, score 96.8, E-value 3.7e-26" FT CDS 218496..219005 FT /transl_table=11 FT /locus_tag="BF9343_0196" FT /old_locus_tag="BF0198" FT /product="putative extracytoplasmic function alternative FT sigma factor" FT /note="Similar to Mycobacterium smegmatis extracytoplasmic FT function alternative sigma factor SigE SWALL:O05767 FT (EMBL:U87307) (204 aa) fasta scores: E(): 3.8e-06, 29.33% FT id in 150 aa, and to Bacteroides thetaiotaomicron RNA FT polymerase ECF-type sigma factor BT3396 SWALL:AAO78502 FT (EMBL:AE016940) (169 aa) fasta scores: E(): 9.5e-50, 86.98% FT id in 169 aa, and to Bacteroides thetaiotaomicron putative FT RNA polymerase ECF-type sigma factor BT0326 SWALL:AAO75433 FT (EMBL:AE016927) (173 aa) fasta scores: E(): 1.6e-12, 33.12% FT id in 163 aa" FT /db_xref="GOA:Q5LIQ1" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:Q5LIQ1" FT /protein_id="CAH05975.1" FT /translation="MQEISFRDDILPLKDKLFRLALRITFDRAEAEDVVQDTMIRVWNK FT REEWTQFGSIEAYCLTVAKNLAIDRSQKKEAQNVELTPEMEEESEISGPYDQLVNNERM FT SIIHRLINELPEKQRLIMQLRDIEGESYKEIAKILNLTEEQVKVNLFRARQKVKQRYLE FT IDEYGL" FT misc_feature 218520..218726 FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 52.5, E-value 7.7e-13" FT misc_feature 218823..218972 FT /note="Pfam match to entry PF04545 sigma70_r4, Sigma-70, FT region 4, score 61.0, E-value 2.3e-15" FT misc_feature 218883..218948 FT /note="Predicted helix-turn-helix motif with score FT 1597.000, SD 4.63 at aa 130-151, sequence FT ESYKEIAKILNLTEEQVKVNLF" FT CDS 218995..219504 FT /transl_table=11 FT /locus_tag="BF9343_0197" FT /old_locus_tag="BF0199" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3397 SWALL:AAO78503 (EMBL:AE016940) (158 aa) FT fasta scores: E(): 2e-34, 63.52% id in 170 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT0325 FT SWALL:AAO75432 (EMBL:AE016927) (153 aa) fasta scores: E(): FT 0.00066, 30.76% id in 143 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LIQ0" FT /protein_id="CAH05976.1" FT /translation="MDYKYIEQLLERYWQCETSLEEESELRSFFSEEEVPAHLLRYKEL FT FVYQTVQQEVGLGKDFDARILAQVEAPVVKAKHLTMVGRFMPLFKAAAVVALILSLGNV FT AQHTFFADEALDYNYDAYKDTYDDPEVAYKQVSSALMMLSEGINKSQDQVVRDSVKVEP FT VRVMKE" FT CDS 219509..219985 FT /transl_table=11 FT /locus_tag="BF9343_0198" FT /old_locus_tag="BF0200" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIP9" FT /protein_id="CAH05977.1" FT /translation="MKSVLLMCWMALLSVAVSAQDFASRFMAEHQADSNLTCVTISPKM FT MEEIMKSDAEKDKEVLDMISNLKSMQVLTSDVEGKKYFNAALKVVEKNSGRFESFLSFK FT DKSENCQIMVRKKKSTIVELVMLMHEKNHFAVVNFTGNMSPEFIAQIKRHFHLL" FT misc_feature 219509..219565 FT /note="Signal peptide predicted for BF0200 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.992 between residues 19 and 20" FT CDS complement(220173..220952) FT /transl_table=11 FT /locus_tag="BF9343_0199" FT /old_locus_tag="BF0201" FT /product="putative lipoprotein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3398 SWALL:AAO78504 (EMBL:AE016940) FT (261 aa) fasta scores: E(): 4.8e-40, 48.65% id in 261 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT1007 SWALL:AAO76114 (EMBL:AE016930) (263 aa) FT fasta scores: E(): 3e-26, 36.29% id in 259 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT1534 FT SWALL:AAO76641 (EMBL:AE016932) (208 aa) fasta scores: E(): FT 1.1e-09, 27.77% id in 216 aa, and to Pseudomonas FT resinovorans hypothetical protein SWALL:Q8GI04 FT (EMBL:AB088420) (246 aa) fasta scores: E(): 1.1e-06, 27.85% FT id in 219 aa" FT /db_xref="InterPro:IPR021255" FT /db_xref="UniProtKB/TrEMBL:Q5LIP8" FT /protein_id="CAH05978.1" FT /translation="MKKYILSSLTITFLLLSITACSQGKQISGSSNYITKNIKVGSFDQ FT IKSMSSSDIVYTQKQGAPTVQIYGPDNIVELMETSVSGRTLTIKFKKNTSIRNSGKLEI FT RVSSPSLKHLSIYGSGNTTFTNGIKSHDELQMSIYGSGNISGNSFSCTKLAARIYGSGN FT VNLKRISTSDTQVNISGSGNVLLDGKSTEAEYHIAGSGDINATELKVENVNARISGSGS FT IRCYATENLTGGVSGSGNVAYKGNPQINFSKRGLQKL" FT misc_feature complement(220887..220952) FT /note="Signal peptide predicted for BF0201 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.491 between residues 22 and 23" FT misc_feature complement(220890..220922) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(220972..221706) FT /transl_table=11 FT /locus_tag="BF9343_0200" FT /old_locus_tag="BF0202" FT /product="putative lipoprotein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3398 SWALL:AAO78504 (EMBL:AE016940) FT (261 aa) fasta scores: E(): 2.6e-12, 29.88% id in 251 aa, FT and to Bacteroides thetaiotaomicron hypothetical protein FT BT1534 SWALL:AAO76641 (EMBL:AE016932) (208 aa) fasta FT scores: E(): 1.5e-11, 31.18% id in 186 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT1007 SWALL:AAO76114 (EMBL:AE016930) (263 aa) fasta FT scores: E(): 7.6e-10, 33.07% id in 254 aa, and to Anabaena FT sp. ORFr4 ALL1511 SWALL:P70759 (EMBL:U72238) (125 aa) fasta FT scores: E(): 4.6e-08, 35.71% id in 112 aa" FT /db_xref="InterPro:IPR021255" FT /db_xref="PDB:3PET" FT /db_xref="UniProtKB/TrEMBL:Q5LIP7" FT /protein_id="CAH05979.1" FT /translation="MKTIFRMLSVLLLTTGLLSSCIQIGEGIQPSKKLITRDYKVKEFN FT KIDAGTVGNIYYTQSTDGKTDLQIYGPDNIVALIQVAVKDNTLFLSIDKSKKVRNFKKM FT KITITSPTLNGISFKGVGDVHIENGLTTDNLDIESKGVGNVDIQSLTCQKLNVQSMGVG FT DVKLEGTAQIAALHSKGVGNIEAGNLRANAVEASSQGVGDITCNATESIDAAVRGVGSI FT KYKGSPTIKSLSKKGVGTIKNI" FT misc_feature complement(221632..221706) FT /note="Signal peptide predicted for BF0202 by SignalP 2.0 FT HMM (Signal peptide probability 0.982) with cleavage site FT probability 0.663 between residues 25 and 26" FT misc_feature complement(221644..221676) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 221827..222525 FT /transl_table=11 FT /locus_tag="BF9343_0201" FT /old_locus_tag="BF0203" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT zinc protease BT3399 SWALL:Q8A2A6 (EMBL:AE016940) (232 aa) FT fasta scores: E(): 1.8e-67, 71.98% id in 232 aa, and to FT Agrobacterium tumefaciens hypothetical protein atu0016 or FT agr_c_25 SWALL:Q8UJB2 (EMBL:AE008976) (255 aa) fasta FT scores: E(): 4.4e-12, 27.92% id in 222 aa, and to FT Chlorobium tepidum zinc protease, putative CT0704 FT SWALL:Q8KEI5 (EMBL:AE012841) (248 aa) fasta scores: E(): FT 1.1e-10, 26.9% id in 223 aa" FT /db_xref="InterPro:IPR002725" FT /db_xref="UniProtKB/TrEMBL:Q5LIP6" FT /protein_id="CAH05980.1" FT /translation="MDRVIEDKELGRLVVRDNVRAKRLVFRTKADAIYISIPLGVTMRE FT VKEAIEKLRPRLLDSRQKLVRPLIDLNYRIETEYFKLSLVSGKRERFLAHSELGEMRII FT CPPTADFTDSNLQDWLRKVIEEALRRNAKIILPPRLYMLSEKHRLPYESVQINSSRGRW FT GSCSSRKKINLSYFLVLLPKHLIDYVLLHELCHTCEMNHGDRFWDLLNGLTDGKALELR FT EELKRYKTEI" FT misc_feature 221953..222519 FT /note="Pfam match to entry PF01863 DUF45, Protein of FT unknown function DUF45, score 2.1, E-value 1.6e-06" FT CDS complement(222687..223085) FT /transl_table=11 FT /locus_tag="BF9343_0202" FT /old_locus_tag="BF0204" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3400 SWALL:AAO78506 (EMBL:AE016940) (131 aa) FT fasta scores: E(): 7.8e-37, 76.33% id in 131 aa" FT /db_xref="GOA:Q5LIP5" FT /db_xref="UniProtKB/TrEMBL:Q5LIP5" FT /protein_id="CAH05981.1" FT /translation="MAHRLNTNKQFMVGNGILAFAVIFVVVIFVYMSLRLQREKEANRH FT FSETYSIQLTKGFVGDSISLFVNDSLIMNKQIKEEPTAIEVGRFAEQSALMIVNNQTET FT VAAFDLSEKGGTYRFEKDIDGIKQLPQK" FT misc_feature complement(222984..223052) FT /note="1 probable transmembrane helix predicted for BF0204 FT by TMHMM2.0 at aa 12-34" FT CDS 223192..224247 FT /transl_table=11 FT /locus_tag="BF9343_0203" FT /old_locus_tag="BF0205" FT /product="putative transmembrane protein" FT /note="Similar to Synechocystis sp. regulatory components FT of sensory transduction system SLR1837 SWALL:P73404 FT (EMBL:D90906) (234 aa) fasta scores: E(): 0.052, 31.25% id FT in 80 aa, and to Clostridium tetani transcriptional FT regulatory component of sensory transduction system FT CTc01421 SWALL:Q894W3 (EMBL:AE015941) (230 aa) fasta FT scores: E(): 0.26, 23.93% id in 188 aa, and to FT Synechococcus elongatus two-component response regulator FT tll2099 SWALL:Q8DH60 (EMBL:AP005376) (232 aa) fasta scores: FT E(): 0.55, 26.89% id in 119 aa" FT /db_xref="GOA:Q5LIP4" FT /db_xref="InterPro:IPR001867" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:Q5LIP4" FT /protein_id="CAH05982.1" FT /translation="MVMSWEKTIFGCLIGGYALLGLLGGNYAYEQEVKALHVYADSVFH FT EAFHVELQKRGMDQVESWRYGCEDSFVSSVDTAFKKVTIQDEYGTYSFRVDAMKIRKNI FT VSSPGEQGLHTVVCLTHPLSVDTLNILWRTMLNERQKFPIRTGLKLTVSDNNGVVRSSF FT SPDSLSCLSYSSIFTYYVGYRCEIEILGFVSISFFSVFVNIVWTLIGVVVAFVLCVILT FT IYIYKLSVHPPKIKEVTTYIQTVAVKKGTLPIYDLKDDLKLDVGKGVLICENMEVSLTP FT QQRVLLVLFIKAENHTLSMSQIMADVWPGKSISPDCFHKAIERLRDLLRQLPMTIQIEY FT LGEEIYQMQIL" FT misc_feature order(223210..223278,223801..223869) FT /note="2 probable transmembrane helices predicted for FT BF0205 by TMHMM2.0 at aa 7-29 and 204-226" FT misc_feature 224104..224127 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 224408..224635 FT /transl_table=11 FT /locus_tag="BF9343_0204" FT /old_locus_tag="BF0206" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIP3" FT /protein_id="CAH05983.1" FT /translation="MRNFFVSAFLLLVGIAVMTVCRMNNKQYLSELALVNVEALATGEG FT DVPTSCYGSGNVDCPISDSKVSYVMNGRSF" FT misc_feature 224408..224476 FT /note="Signal peptide predicted for BF0206 by SignalP 2.0 FT HMM (Signal peptide probability 0.932) with cleavage site FT probability 0.398 between residues 23 and 24" FT CDS 224815..225081 FT /transl_table=11 FT /locus_tag="BF9343_0205" FT /old_locus_tag="BF0207" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIP2" FT /protein_id="CAH05984.1" FT /translation="MNYKKKIICLLALFTIVVVNVLNVVVKSDDAETLTLSGIEAVAAT FT YENSPGNYTGAHNQYCTSPKNATGCVSDPDPTRTCSYSIFCKK" FT misc_feature 224815..224883 FT /note="Signal peptide predicted for BF0207 by SignalP 2.0 FT HMM (Signal peptide probability 0.991) with cleavage site FT probability 0.429 between residues 23 and 24" FT CDS 225143..226336 FT /transl_table=11 FT /locus_tag="BF9343_0206" FT /old_locus_tag="BF0208" FT /product="hypothetical exported protein" FT /note="no significant database matches" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LIP1" FT /protein_id="CAH05985.1" FT /translation="MLVMKYLNLFIFVLLLAGCNRPVKHSDIIQADTMVSIIPQEDTIT FT LSALFSRCEIVKLNDIVLASINKVFKYDSLWIVQGKSDQGGVHLFNNEGRYLKTVLKWG FT QGPEEAYDIWSIKLLDGSIYLLINSGTEVVEYSLQKQKMVERFRLPSEILSATDFVVDN FT GGNYIFLKSISREKKKEEYKLYVYNKKEGTIVNRILNMDKKSSEYISFDQSDCLYRVQD FT EIYYYEVFRNGICRLSANDMTGYIAFKQNEYTFPEKELYNEDHTFQSFIDVCENSPFIW FT AHRNLFEGERFVSSTYMYKKELFWNIIDKSDYSVHSYKWVYDDLILNEVVPVEDYLYRA FT NVQENIHYYTLSFYDFDRIMQLKKKCKKSVGEKWMVKLDDMLDENSNDIIVCFYEKK" FT misc_feature 225167..225199 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 226341..226409 FT /note="1 probable transmembrane helix predicted for BF0209 FT by TMHMM2.0 at aa 7-29" FT CDS 226356..226883 FT /transl_table=11 FT /locus_tag="BF9343_0207" FT /old_locus_tag="BF0209" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIP0" FT /protein_id="CAH05986.1" FT /translation="MLALCLFTNCLFIGYYYYQQNREVLLGQELEHQKKQNYELIVNQI FT ESGIIPHVISDKKEFAGYFVLVFPNGICDVCNKWLFKQISELSSTSDLVVVVPDKLKKN FT MEIYNTVYKLKLSSIFCSEKYAMPQEEFKDMTYIFYCSKTGTVLYPLALHHKNIDLDLY FT FKLVKSIDLDFL" FT CDS 227088..228068 FT /transl_table=11 FT /gene="fucR" FT /locus_tag="BF9343_0208" FT /old_locus_tag="BF0210" FT /product="putative GntR-family regulatory protein" FT /note="Similar to Bacteroides thetaiotaomicron FucR or FT BT1272 SWALL:AAO76379 (EMBL:AF137263) (331 aa) fasta FT scores: E(): 1.3e-85, 68.3% id in 325 aa, and to FT Bacteroides thetaiotaomicron FucR or BT1272 SWALL:Q9RQ14 FT (EMBL:AF137263) (331 aa) fasta scores: E(): 1.3e-85, 68.3% FT id in 325 aa, and to Bacteroides thetaiotaomicron putative FT transcriptional regulator BT2096 SWALL:AAO77203 FT (EMBL:AE016934) (325 aa) fasta scores: E(): 4.6e-33, 36.22% FT id in 323 aa" FT /db_xref="GOA:Q5LIN9" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q5LIN9" FT /protein_id="CAH05987.1" FT /translation="MKITFGQQTTKVKQLADKISFDISMGVYKSGDSLPSINQLSQAYE FT VSRDTVFKAFLDLKERGIIDSTPGKGYYVVGRLKNVLLLLDEYSPFKYALYNSFVKRLS FT IRYKVDLLFHQYNERLFNTIIRESLGRYNKYIVMNFDNEKLSPNLYKINPSKLLLLDFG FT KFEKEGFSYVCQDFDQGFYNALFQLADRLRKYQKLVFVLVDDSMHPRSSRDFFERFCAD FT QHLGCEVVSDIEGLQVRRGEVYIAIRQIDVVSIIKKSRVEGLQCGVDFGLIGYNDTPAY FT EVIDQGITALSVDWEKMGDKAAEFVLQGKTIQDYLPTEVRLRASL" FT misc_feature 227130..227309 FT /note="Pfam match to entry PF00392 gntR, Bacterial FT regulatory proteins, gntR family, score 53.1, E-value FT 5.1e-13" FT misc_feature 227187..227261 FT /note="PS00043 Bacterial regulatory proteins, gntR family FT signature." FT CDS 228141..229913 FT /transl_table=11 FT /gene="fucI" FT /locus_tag="BF9343_0209" FT /old_locus_tag="BF0211" FT /product="putative L-fucose isomerase" FT /EC_number="5.3.1.25" FT /note="Similar to Escherichia coli, and Shigella flexneri FT L-fucose isomerase FucI or B2802 or SF2816 SWALL:FUCI_ECOLI FT (SWALL:P11552) (591 aa) fasta scores: E(): 4.7e-158, 63% id FT in 592 aa, and to Bacteroides thetaiotaomicron L-fucose FT isomerase FucI or BT1273 SWALL:Q9RQ13 (EMBL:AF137263) (591 FT aa) fasta scores: E(): 0, 90.52% id in 591 aa, and to FT Bacteroides thetaiotaomicron L-fucose isomerase FucI or FT BT1273 SWALL:AAO76380 (EMBL:AF137263) (591 aa) fasta FT scores: E(): 0, 90.52% id in 591 aa" FT /db_xref="GOA:Q5LIN8" FT /db_xref="HSSP:1FUI" FT /db_xref="InterPro:IPR004216" FT /db_xref="InterPro:IPR005763" FT /db_xref="InterPro:IPR009015" FT /db_xref="InterPro:IPR012888" FT /db_xref="InterPro:IPR012889" FT /db_xref="InterPro:IPR015888" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIN8" FT /protein_id="CAH05988.1" FT /translation="MKKYPKIGIRPTIDGRQGGVRESLEEKTMNLAKAVAELITSNLKN FT GDGTPVECVIADGTIGRVAESAACAEKFEREGVGATITVTSCWCYGAETMDMNPYYPKA FT VWGFNGTERPGAVYLAAVLAGHAQKGLPAFGIYGRDVQDLNDNSIPADVAEKILRFARA FT AQAVATMRGKSYLSMGSVSMGIAGSIVNPDFFQEYLGMRNESIDLTEIIRRMAEGIYDK FT EEYAKAMAWTEKYCKKNEGNDFNIPEKTKTRAQKDEDWEFIVKMTIIMRDLMQGNPKLK FT ELGFKEEALGHNAIAAGFQGQRQWTDFYPNGDFSEALLNTSFDWNGIREAFVVTTENDA FT CNGVAMLFGHLLTNRAQIFSDVRTYWSPEAVKRVTGKELTGMAANGIIHLINSGATTLD FT GTGQQTNANGEPAMKPCWEITEGEVEKCLEATTWYPANRDYFRGGGFSSNFLSKGGMPV FT TMMRLNLIKGLGPVLQIAEGWTVEIDPEIHKLLDERTDRTWPTTWFVPRLCDKPAFKDV FT YSVMNNWGANHGAISYGHIGQDVITLASMLRIPVCMHNVEEDQIFRPAAWNAFGMDKEG FT ADYRACTTYGPIYK" FT misc_feature 229206..229910 FT /note="Pfam match to entry PF02952 fucose_iso_C, L-fucose FT isomerase, C-terminal domain, score 606.2, E-value FT 1.6e-179" FT CDS 229932..231086 FT /transl_table=11 FT /gene="fucO" FT /locus_tag="BF9343_0210" FT /old_locus_tag="BF0212" FT /product="putative lactaldehyde reductase" FT /EC_number="1.1.1.77" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 lactaldehyde reductase FucO or B2799 or Z4116 or FT ECS3659 SWALL:FUCO_ECOLI (SWALL:P11549) (383 aa) fasta FT scores: E(): 1.3e-74, 55.87% id in 383 aa, and to FT Bacteroides thetaiotaomicron lactaldehyde reductase BT3767 FT SWALL:AAO78872 (EMBL:AE016942) (384 aa) fasta scores: E(): FT 2.7e-88, 64.15% id in 385 aa, and to Salmonella typhimurium FT L-1,2-propanediol oxidoreductase FucO or STM2973 FT SWALL:Q8ZMC8 (EMBL:AE008836) (382 aa) fasta scores: E(): FT 4e-77, 56.91% id in 383 aa" FT /db_xref="GOA:Q5LIN7" FT /db_xref="InterPro:IPR001670" FT /db_xref="InterPro:IPR013460" FT /db_xref="InterPro:IPR018211" FT /db_xref="UniProtKB/TrEMBL:Q5LIN7" FT /protein_id="CAH05989.1" FT /translation="MINRFILNEVSYFGPGAREVLPKEISRLGLHKAFVATDKDLIKFG FT VADKVLKVLEAAKIPYEIFSEIKPNPTVSNVKAGVEAFASSGADFILAIGGGSSMDTAK FT AIGIITNNPEFSDVVSLEGVADTKKKSVPIIALPTTAGTAAEVTINYVITDEKNQKKMV FT CVDPNDIPSIAIVDAELMYTLPKSLTAATGLDALTHAIEGLITKGAWEMSDMFEIKAIE FT MINRYLVTAVEEPSNAEARNGMAVAQYIAGMAFSNVGLGVVHGMAHPLGAIFDIPHGVA FT NALLLPIIMEFNAPAALDKYVEIAKAMNVYSTDMTKEKAAEAAVEAVKTLSLRVNIPQH FT LSDLGIQESDLDRLATAAFADVCTPGNPREVTKEIILDLYKKAL" FT misc_feature 229953..231059 FT /note="Pfam match to entry PF00465 Fe-ADH, Iron-containing FT alcohol dehydrogenase, score 532.4, E-value 2.7e-157" FT misc_feature 230451..230537 FT /note="PS00913 Iron-containing alcohol dehydrogenases FT signature 1." FT misc_feature 230712..230774 FT /note="PS00060 Iron-containing alcohol dehydrogenases FT signature 2." FT CDS 231083..231721 FT /transl_table=11 FT /gene="fucA" FT /locus_tag="BF9343_0211" FT /old_locus_tag="BF0213" FT /product="putative aldolase" FT /note="Similar to Escherichia coli hypothetical aldolase FT class II protein YgbL or B2738 SWALL:YGBL_ECOLI FT (SWALL:Q46890) (212 aa) fasta scores: E(): 3.8e-13, 33.51% FT id in 182 aa, and to Bacteroides thetaiotaomicron FT L-fuculose-1-phosphate aldolase FucA or BT1274 SWALL:Q9RQ12 FT (EMBL:AF137263) (212 aa) fasta scores: E(): 2.1e-79, 91.5% FT id in 212 aa, and to Bacteroides thetaiotaomicron FT L-fuculose-1-phosphate aldolase FucA or BT1274 FT SWALL:AAO76381 (EMBL:AF137263) (212 aa) fasta scores: E(): FT 2.1e-79, 91.5% id in 212 aa" FT /db_xref="GOA:Q5LIN6" FT /db_xref="InterPro:IPR001303" FT /db_xref="UniProtKB/TrEMBL:Q5LIN6" FT /protein_id="CAH05990.1" FT /translation="MITNEHIEQYLAQAHRYGDAKLMLCSSGNLSWRIGEEALVSGTGS FT WVPNLQKEKVSICNIATGTPQNGVKPSMESTFHLGILRERPDVNVVLHFQSEYATAVSC FT MKNKPSNFNVTAEIPCHVGKEIPIIPYYRPGSPALAKAVVEAMKEHNSVLLTNHGQVVC FT GKDFDQVYERATFFEMACRIIVQSGGDYSVLTPEEIDDLEVYVLGKKTK" FT misc_feature 231095..231676 FT /note="Pfam match to entry PF00596 Aldolase_II, Class II FT Aldolase and Adducin N-terminal domain, score 163.5, FT E-value 3.1e-46" FT CDS 231739..233151 FT /transl_table=11 FT /gene="fucK" FT /gene_synonym="rhaB" FT /locus_tag="BF9343_0212" FT /old_locus_tag="BF0214" FT /product="putative fuculokinase" FT /EC_number="2.7.1.5" FT /note="Similar to Salmonella typhimurium rhamnulokinase FT RhaB or STM4047 SWALL:RHAB_SALTY (SWALL:P27030) (489 aa) FT fasta scores: E(): 1e-63, 40.59% id in 468 aa, and to FT Bacteroides thetaiotaomicron L-fuculose kinase FucK or FT BT1275 SWALL:Q9RQ11 (EMBL:AF137263) (476 aa) fasta scores: FT E(): 3.9e-138, 68.87% id in 469 aa, and to Bacteroides FT thetaiotaomicron L-fuculose kinase FucK or BT1275 FT SWALL:AAO76382 (EMBL:AF137263) (476 aa) fasta scores: E(): FT 3.9e-138, 68.87% id in 469 aa" FT /db_xref="GOA:Q5LIN5" FT /db_xref="InterPro:IPR000577" FT /db_xref="InterPro:IPR018484" FT /db_xref="InterPro:IPR018485" FT /db_xref="UniProtKB/TrEMBL:Q5LIN5" FT /protein_id="CAH05991.1" FT /translation="MSTYLAADFGGGSGRIMAGTLTEGKLKLEEVYRFANRQIKLGNCV FT YWDFLSLFEEMKNGLRVAARKGYEVKSMAIDTWGVDFGLIDKDGKLLGNPVCYRDSRTD FT GIPERVFKQIDQTVHYAETGIQVMPINTLFQLYSMKQNDDVQLRVADKLLFMPDLFSYF FT LTGVANNEYCIASTSELLDARQRNWSDNLISELGLPRQLFGEIVFPGTVRGKLKQEIAD FT ETGLGCINVVAVGSHDTASAVFAVPSNEPNRAYLSSGTWSLLGAEVDQPILTEEARVAG FT FTNEGGIQGKIRFLQNITGLWILQRLMAEWKEQGKEISYDCAIAEATVSDIRSVIDVDD FT SAFCNPDHMEESIIKYCHKHHLRTPVSQGEFVRCVIESLAYRYKLGVEQMNRCLPAPVK FT QLHIIGGGCQNRLLNQLTANALGIPVYAGPVEATAIGNILVQAKAQGEVDSWEELKEII FT INSVEPQVYYPE" FT misc_feature 231745..232473 FT /note="Pfam match to entry PF00370 FGGY, FGGY family of FT carbohydrate kinases, N-terminal domain, score 8.3, E-value FT 1e-09" FT misc_feature 232840..233013 FT /note="Pfam match to entry PF02782 FGGY_C, FGGY family of FT carbohydrate kinases, C-terminal domain, score 26.6, FT E-value 1.9e-07" FT CDS 233163..234494 FT /transl_table=11 FT /gene="fucP" FT /locus_tag="BF9343_0213" FT /old_locus_tag="BF0215" FT /product="putative L-fucose permease" FT /note="Similar to Escherichia coli L-fucose permease FucP FT or B2801 SWALL:FUCP_ECOLI (SWALL:P11551) (438 aa) fasta FT scores: E(): 1.9e-46, 35.08% id in 419 aa, and to FT Bacteroides thetaiotaomicron L-fucose permease FucP or FT BT1277 SWALL:Q9RQ10 (EMBL:AF137263) (438 aa) fasta scores: FT E(): 5.9e-141, 82.56% id in 436 aa, and to Bacteroides FT thetaiotaomicron L-fucose permease FucP or BT1277 FT SWALL:AAO76384 (EMBL:AF137263) (438 aa) fasta scores: E(): FT 5.9e-141, 82.56% id in 436 aa" FT /db_xref="GOA:Q5LIN4" FT /db_xref="InterPro:IPR005275" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q5LIN4" FT /protein_id="CAH05992.1" FT /translation="MKNTNRSILHKDGVSYILPFILVTSCFALWGFANDITNPMVKAFS FT KIFRMSVTDGALVQVAFYGGYFAMAFPAAMFIRKYSYKAGILLGLGLYALGALLFFPAK FT MTGDYYPFLLAYFILTCGLSFLETSANPYILSMGTEETATRRLNLAQSFNPMGSLLGMY FT VAMNFIQARLNPMDTVERSQLSPAEFEVLKESDLSVLIAPYLIIGLVILAMLFVIRAVK FT MPKNGDKNHNIDFIPTLKRIFKIPHYREGVIAQFFYVGAQIMCWTFVIQYGTRLFMSQG FT MEEKAAEVLSQEYNIIAMIIFCISRFVCTFILRYLNPGMLLKILAIAGGAFTLGVIFLQ FT DIWGLYCLVAVSACMSLMFPTIYGIALRGLGDDAKFGAAGLIMAILGGSVLPPLQACII FT DQHTLLGMPAVNLSFILPFICFVVIIIYGHRTCARVKKIKAERG" FT misc_feature order(233199..233258,233325..233393,233412..233471, FT 233499..233567,233601..233669,233757..233825, FT 233916..233984,234042..234110,234123..234191, FT 234204..234272,234291..234359,234372..234440) FT /note="12 probable transmembrane helices predicted for FT BF0215 by TMHMM2.0 at aa 13-32, 55-77, 84-103, 113-135, FT 147-169, 199-221, 252-274, 294-316, 321-343, 348-370, FT 377-399 and 404-426" FT CDS 235211..235678 FT /transl_table=11 FT /locus_tag="BF9343_0214" FT /old_locus_tag="BF0217" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3402 SWALL:AAO78508 (EMBL:AE016940) FT (155 aa) fasta scores: E(): 1.9e-50, 89.03% id in 155 aa, FT and to Pseudomonas aeruginosa hypothetical protein Pa4746 FT SWALL:Q9HV53 (EMBL:AE004888) (152 aa) fasta scores: E(): FT 0.00019, 34.78% id in 92 aa, and to Ralstonia solanacearum FT hypothetical protein RSC1287 or RS02964 SWALL:Q8XZV8 FT (EMBL:AL646063) (162 aa) fasta scores: E(): 0.00027, 29.48% FT id in 156 aa" FT /db_xref="GOA:Q5LIN3" FT /db_xref="InterPro:IPR003728" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIN3" FT /protein_id="CAH05993.1" FT /translation="MIEKRTVCQIVEEWLEDKDYFLVEVTVSPDDKIVVEIDHAEGVWI FT EDCVELSRFIESKLNREEEDYELEVGSAGIGQPFKVLQQYYNHIGLEVEVLTKGGRKLS FT GVLKDADEEKFVVTVQKKVKPEGAKRPQLVEEDETFTYDDIKYTKYLISFK" FT misc_feature 235238..235660 FT /note="Pfam match to entry PF02576 DUF150, Uncharacterised FT BCR, YhbC family COG0779, score 41.1, E-value 2.2e-09" FT CDS 235681..236943 FT /transl_table=11 FT /locus_tag="BF9343_0215" FT /old_locus_tag="BF0218" FT /product="putative N utilization substance protein A" FT /note="Similar to Bacillus subtilis N utilization substance FT protein A homolog NusA SWALL:NUSA_BACSU (SWALL:P32727) (371 FT aa) fasta scores: E(): 3.6e-37, 35.75% id in 358 aa, and to FT Bacteroides thetaiotaomicron putative nitrogen utilization FT substance protein BT3403 SWALL:AAO78509 (EMBL:AE016940) FT (439 aa) fasta scores: E(): 1.4e-145, 98.32% id in 418 aa, FT and to Bradyrhizobium japonicum N-utilization substance FT protein A NusA or BLL0785 SWALL:BAC46050 (EMBL:AP005937) FT (536 aa) fasta scores: E(): 3.2e-40, 31.46% id in 429 aa" FT /db_xref="GOA:Q5LIN2" FT /db_xref="InterPro:IPR004087" FT /db_xref="InterPro:IPR009019" FT /db_xref="InterPro:IPR010213" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013735" FT /db_xref="InterPro:IPR015946" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR022967" FT /db_xref="UniProtKB/TrEMBL:Q5LIN2" FT /protein_id="CAH05994.1" FT /translation="MAKKEETISLIDTFSEFKELKNIDRTTMVSVLEESFRSVIAKMFG FT TDENYDVIVNPDKGDFEIWRNREVVADEDLTNPNMQISLTEAQKIDASYEVGEEVTDEV FT IFAKFGRRAILNLRQTLASKILELEKDSIYNKYIDKVGTIINAEVYQIWKKEMLLLDDE FT GNELLLPKTEQIPSDFYRKGETARAVVARVDNKNNNPKIILSRTSPVFLQRLFEMEVPE FT INDGLITIKKIARIPGERAKIAVESYDDRIDPVGACVGVKGSRIHGIVRELRNENIDVI FT NYTSNISLFIQRALSPAKISSIRLNEEERKAEVFLKPEEVSLAIGKGGLNIKLASMLTE FT YTIDVFRELDENAQDEDIYLDEFRDEIDGWVIDAIKAIGIDTAKSVLNAPREMLIEKTD FT LEEETVDEVLRILKSEFEDNE" FT misc_feature 236617..236766 FT /note="Pfam match to entry PF00013 KH, KH domain, score FT 23.9, E-value 0.00033" FT CDS 237064..240111 FT /transl_table=11 FT /locus_tag="BF9343_0216" FT /old_locus_tag="BF0219" FT /product="putative translation initiation factor IF-2" FT /note="Similar to Salmonella typhimurium translation FT initiation factor IF-2 InfB or STM3286 SWALL:IF2_SALTY FT (SWALL:Q9ZF31) (892 aa) fasta scores: E(): 7.8e-82, 41.81% FT id in 916 aa, and to Bacteroides thetaiotaomicron FT translation initiation factor IF-2 BT3404 SWALL:AAO78510 FT (EMBL:AE016940) (1040 aa) fasta scores: E(): 1.5e-177, FT 81.6% id in 1049 aa, and to Chlorobium tepidum translation FT initiation factor IF-2 InfB or CT0241 SWALL:IF2_CHLTE FT (SWALL:Q8KFT1) (914 aa) fasta scores: E(): 4.9e-92, 42.74% FT id in 1020 aa. CDS truncated at the N-terminus relative to FT the Salmonella IF2" FT /db_xref="GOA:Q5LIN1" FT /db_xref="InterPro:IPR000178" FT /db_xref="InterPro:IPR000795" FT /db_xref="InterPro:IPR004161" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006847" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR015760" FT /db_xref="InterPro:IPR023115" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIN1" FT /protein_id="CAH05995.1" FT /translation="MTIRLNKVTRDLNVGIATVVEFLQKKGYTVEANPNTKITEEQYAM FT LVKEFSTDKNLRLESERFIQERQNKDRNKASVSIDGYDKKEPEKTVADDVIKTVIPEDV FT RPKFKPVGKIDLDKLNRKVEKEPVKEEPKPQPVAAEEKKVAEEVKPVVNEVKKEEVTVT FT PATSEPKPVKEEPKPVVVEKPVETEKKVVEEVKKEEPKVVVSPEKTEKKEEKPVAEAPV FT TPVEKEEEGVFKIRPTEFVSKINVIGQIDLAALNQSTRPKKKSKEEKRKEREEKEKLRQ FT DQKKQMKEAIIKEIRKEDSKQAKVVGKENLDPNGKKKRNRINNNKEKVDVNNVASNFAH FT PTPNSERTNNNRGGNQQGGGGQNRNRNNNNKDRFKKPVVKQEVSEEDVAKQVKETLARL FT TSKGKNKGAKYRKEKRDMASNRMQELEDQEMAESKVLKLTEFVTANELASMMNVSVNQV FT IGTCMSIGMMVSINQRLDAETINLVAEEFGFKTEYVSAEVAQAIVEEEDAPEDLEHRAP FT IVTVMGHVDHGKTSLLDYIRKANVIAGEAGGITQHIGAYHVTLEDGRKITFLDTPGHEA FT FTAMRARGAKVTDIAIIIVAADDDVMPQTKEAINHAAAAGVPIVFAINKIDKPHANPEK FT IKETLAQMNYLVEEWGGKYQSQDISAKKGLGVPELMEKVLLEAEMLDLKANPNRNATGS FT IIESTLDKGRGYVATVLVSNGTLKVGDIVLAGTSYGRVKAMFNERNQRVAQAGPSEPVL FT ILGLNGAPAAGDTFHVIETDQEAREIANKREQLQREQGLRTQKLLTLDEVGRRIALGNF FT QELNVIVKGDVDGSIEALSDSLIKLSTEQIQVNVIHKAVGQISESDVTLAAASDAIIIG FT FQVRPSASARKFAEQEGVDIRLYSVIYAAIEEVKAAMEGMLAPEVKEVVTATIEVREVF FT HITKVGTVAGAVVKEGKVKRSDKARLIRDGIVIFSGSINALKRFKDDVKEVGTNFECGI FT SLVNYNDLKVGDMIETYEEVEVKQTL" FT misc_feature 238378..238533 FT /note="Pfam match to entry PF04760 IF2_N, Translation FT initiation factor IF-2, N-terminal region, score 50.0, FT E-value 4.5e-12" FT misc_feature 238603..239109 FT /note="Pfam match to entry PF00009 GTP_EFTU, Elongation FT factor Tu GTP binding domain, score 176.5, E-value 3.7e-50" FT misc_feature 238630..238653 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 239170..239367 FT /note="Pfam match to entry PF03144 GTP_EFTU_D2, Elongation FT factor Tu domain 2, score 62.8, E-value 6.3e-16" FT misc_feature 239863..240075 FT /note="Pfam match to entry PF03144 GTP_EFTU_D2, Elongation FT factor Tu domain 2, score 33.5, E-value 4.2e-07" FT CDS 240186..240689 FT /transl_table=11 FT /locus_tag="BF9343_0217" FT /old_locus_tag="BF0220" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3405 SWALL:AAO78511 (EMBL:AE016940) FT (176 aa) fasta scores: E(): 4e-50, 83.13% id in 166 aa" FT /db_xref="GOA:Q5LIN0" FT /db_xref="InterPro:IPR003825" FT /db_xref="UniProtKB/TrEMBL:Q5LIN0" FT /protein_id="CAH05996.1" FT /translation="MTTIDIIILIALGAGVIVGFMKGFIRQLASILGLIVGLLAAKALY FT TSLAVKLCPTVTDSMTVAQILAFIIIWIAVPLIFTLVASVLTKALEAVSLGWLNRMLGA FT GLGALKYLLLVSLVICVIQFIDSDSQLISQTKKEQSLLYYPMESFAGIFFPAAKEVTQQ FT YIFK" FT misc_feature 240192..240662 FT /note="Pfam match to entry PF02674 Colicin_V, Colicin V FT production protein, score 74.1, E-value 2.5e-19" FT misc_feature order(240195..240248,240267..240335,240363..240431, FT 240492..240560,240603..240656) FT /note="5 probable transmembrane helices predicted for FT BF0220 by TMHMM2.0 at aa 4-21, 28-50, 60-82, 103-125 and FT 140-157" FT CDS 240692..242149 FT /transl_table=11 FT /locus_tag="BF9343_0218" FT /old_locus_tag="BF0221" FT /product="putative ABC transporter membrane protein" FT /note="Similar to Escherichia coli predicted ABC FT transporter SufB protein or B1683 SWALL:SUFB_ECOLI FT (SWALL:P77522) (495 aa) fasta scores: E(): 2.3e-124, 61.72% FT id in 499 aa, and to Bacteroides thetaiotaomicron ABC FT transporter permease BT3406 SWALL:AAO78512 (EMBL:AE016940) FT (484 aa) fasta scores: E(): 4.8e-194, 98.14% id in 484 aa, FT and to Rhizobium meliloti hypothetical protein R01735 or FT SMC00530 SWALL:Q92PK9 (EMBL:AL591788) (489 aa) fasta FT scores: E(): 1.9e-141, 69.95% id in 486 aa" FT /db_xref="GOA:Q5LIM9" FT /db_xref="InterPro:IPR000825" FT /db_xref="InterPro:IPR010231" FT /db_xref="UniProtKB/TrEMBL:Q5LIM9" FT /protein_id="CAH05997.1" FT /translation="MMQQEEPNKYVKELTQEKYKYGFTTEVHTDIIEKGLNEDVVRLIS FT SKKNEPEWLLEFRLKAYRHWLTLEMPTWAHLRIPEIDYQAISYYADPTKKKEGPKSMDE FT VDPELIKTFNKLGIPLEEQMALSGMAVDAVMDSVSVKTTFKETLMEKGIIFCSFSEAVR FT EHPDLVKKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTG FT QFERTLIVADDDSYVSYLEGCTAPMRDENQLHAAIVEIMVHDRAEVKYSTVQNWYPGDA FT EGKGGVYNFVTKRGNCKGVDSKLSWTQVETGSAITWKYPSCILSGDNSTAEFYSVAVTN FT NYQQADTGTKMIHLGKNTRSTIVSKGISAGKSENSYRGLVRVAEKADNARNYSQCDSLL FT LGDKCGAHTFPYMDIHNETAVVEHEATTSKISEDQIFYCNQRGISTEDAIGLIVNGYAK FT EVLNKLPMEFAVEAQKLLTISLEGSVG" FT misc_feature 241337..242059 FT /note="Pfam match to entry PF01458 UPF0051, Uncharacterized FT protein family (UPF0051), score 464.7, E-value 6.5e-137" FT CDS 242149..242895 FT /transl_table=11 FT /locus_tag="BF9343_0219" FT /old_locus_tag="BF0222" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIM8" FT /protein_id="CAH05998.1" FT /translation="MKTKRVGWLLIFLSYVGVVLAQNLDDQERRWAISGSWGGNWPIVT FT KNTLSGKAVSAGHIHTLMLEYYIPYTRFSLKGGYTGEEIGLNPGISASMSNLEIGGRYY FT FLPQRFAIQPYGGLSTGWNLSPRRQEGMGSSSYYDPSRQEFRKDYDYRYRIKEPLFTVS FT PVVGADIYFLSCLALTLEYNFRMGIAGKISGEIEKTNSRGTGFVRSNGMRQTVSVGVKV FT NFPFTITQTDGNSILQWLDEVIFGKE" FT misc_feature 242149..242211 FT /note="Signal peptide predicted for BF0222 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.998 between residues 21 and 22" FT misc_feature 242308..242340 FT /note="PS00626 Regulator of chromosome condensation (RCC1) FT signature 2." FT misc_feature 242326..242358 FT /note="PS00133 Zinc carboxypeptidases, zinc-binding region FT 2 signature." FT CDS 242919..243671 FT /transl_table=11 FT /locus_tag="BF9343_0220" FT /old_locus_tag="BF0223" FT /product="putative ABC transporter, ATP-binding protein" FT /note="Similar to Escherichia coli probable ATP-dependent FT transporter SufC or B1682 SWALL:SUFC_ECOLI (SWALL:P77499) FT (248 aa) fasta scores: E(): 1.5e-50, 61.13% id in 247 aa, FT and to Bacteroides thetaiotaomicron ABC transporter FT ATP-binding protein BT3407 SWALL:Q8A298 (EMBL:AE016940) FT (250 aa) fasta scores: E(): 1.3e-83, 98.4% id in 250 aa, FT and to Ceratium horridum putative ATP-dependent transporter FT YCF16 SWALL:AAO85447 (EMBL:AF490364) (263 aa) fasta scores: FT E(): 3.4e-57, 68.54% id in 248 aa" FT /db_xref="GOA:Q5LIM7" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010230" FT /db_xref="UniProtKB/TrEMBL:Q5LIM7" FT /protein_id="CAH05999.1" FT /translation="MLEIKDLHASINGKEILKGINLTVKPGEVHAIMGPNGSGKSTLSS FT VLVGNPAFEVTKGSITFYGKNLLELSPEDRSHEGIFLSFQYPVEIPGVSMVNFMRAAVN FT EQRKYKGLPALTASEFLKLMREKRAVVELDNKLANRSVNEGFSGGEKKRNEIFQMAMLE FT PRLSILDETDSGLDIDALRIVAEGVNKLKTPDTSCIVITHYQRLLDYIKPDIVHVLYKG FT RIVKTAGPELALELEEKGYDWIKKELGE" FT misc_feature 242997..243584 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 105.0, E-value 1.3e-28" FT misc_feature 243018..243041 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 243668..245023 FT /transl_table=11 FT /locus_tag="BF9343_0221" FT /old_locus_tag="BF0224" FT /product="putative ABC transporter protein" FT /note="Similar to Erwinia chrysanthemi ABC transporter SufD FT protein SWALL:Q9EXP3 (EMBL:AJ301654) (430 aa) fasta scores: FT E(): 5.3e-25, 29.8% id in 416 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein, putative FT ABC transporter permease component BT3408 SWALL:AAO78514 FT (EMBL:AE016940) (447 aa) fasta scores: E(): 2.2e-167, FT 91.72% id in 447 aa, and to Bradyrhizobium japonicum FT Blr4341 protein SWALL:BAC49606 (EMBL:AP005950) (434 aa) FT fasta scores: E(): 3.8e-36, 32.01% id in 431 aa" FT /db_xref="GOA:Q5LIM6" FT /db_xref="InterPro:IPR000825" FT /db_xref="InterPro:IPR011542" FT /db_xref="UniProtKB/TrEMBL:Q5LIM6" FT /protein_id="CAH06000.1" FT /translation="MSLIMNAEQQYIDLFSQCEAMICRHSAEALNAPRATAFADFERQG FT FPTRKQEKYKYTDVSKFFEPDYGLNLNRLPIPVNPYEVFKCDVPNMSTSLFFVVNDAFY FT NQALPKSGLPEGVIFGSLRNMAEQHPELVKKYYGKLADTSKDAVTAFNTAFAQDGVLMY FT VPKNVIVDRPIQLVNILRADVNFMVNRRVLIILEEGAQARLLICDHAMDNVNFLATQVI FT EVFAEENSVFDLYELEETHTSTVRFSNLYVKQGANSNVLLNGMTLHNGTTRNTTEVTLA FT GEGAEINLCGMAIADKNQHVDNNTSIDHAVPNCTSNELFKYVLDDQSVGAFAGLVLVRP FT DAQHTSSQQTNRNLCATRDARMYTQPQLEIYADDVKCSHGATVGQLDENALFYMRARGI FT AEKEARLLLMFAFVNEVIDTIRLEALKDRLHLLVEKRFRGELNKCQGCSICK" FT misc_feature 244208..244903 FT /note="Pfam match to entry PF01458 UPF0051, Uncharacterized FT protein family (UPF0051), score 133.1, E-value 4.4e-37" FT CDS 245035..246246 FT /transl_table=11 FT /locus_tag="BF9343_0222" FT /old_locus_tag="BF0225" FT /product="putative aminotransferase" FT /note="Similar to Erwinia chrysanthemi cysteine desulfurase FT SufS SWALL:Q9EXP2 (EMBL:AJ301654) (412 aa) fasta scores: FT E(): 6.8e-79, 50% id in 402 aa, and to Bacteroides FT thetaiotaomicron aminotransferase, putative cysteine FT desulfurase BT3409 SWALL:Q8A296 (EMBL:AE016940) (403 aa) FT fasta scores: E(): 7.3e-138, 87.59% id in 403 aa, and to FT Nitrosomonas europaea aminotransferase class-V NE1447 FT SWALL:CAD85358 (EMBL:BX321861) (422 aa) fasta scores: E(): FT 7.5e-92, 57.85% id in 401 aa" FT /db_xref="GOA:Q5LIM5" FT /db_xref="InterPro:IPR000192" FT /db_xref="InterPro:IPR010970" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q5LIM5" FT /protein_id="CAH06001.1" FT /translation="MNIHKIREDFPILSRTVYGKPLVYLDNGATTQKPRLVIDSIVDEY FT YSVNANVHRGVHFLSQQATELHEASRETVRQFINARSTREVIFTRGTTESINLIVSSFG FT EEFMQEGDEVIVSVMEHHSNIVPWQLLAARKGIAIKVIPMNDKGELLLEEYENLFSERT FT KIVSVTQVSNVLGTINPVKEMIATAHAHGVPVMIDGAQSIPHMKVDVQDLDADFFVFSG FT HKIYGPTGIGVLYGKEDWLERLPPYQGGGEMIQSVSFEKTVFGELPFKFEAGTPDYIAT FT TGLAKALDYVTGIGLDPIALHEHELTVYAMQRLKEIPNMRIFGEAEHKSSVISFLVGDI FT HHLDLGTLLDRLGIAVRTGHHCAEPLMRRLGIEGTVRASFAVYNTKEEVDALVAGIERV FT SKMF" FT misc_feature 245143..246210 FT /note="Pfam match to entry PF00266 aminotran_5, FT Aminotransferase class-V, score 58.3, E-value 1.4e-14" FT CDS 246538..246858 FT /transl_table=11 FT /locus_tag="BF9343_0223" FT /old_locus_tag="BF0226" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3410 SWALL:AAO78516 (EMBL:AE016940) FT (107 aa) fasta scores: E(): 1.2e-29, 84.9% id in 106 aa, FT and to Salmonella typhimurium, and Salmonella typhi FT hypothetical protein YbjQ or STM0930 or STY0926 or t2003 FT SWALL:YBJQ_SALTY (SWALL:Q8XGV2) (107 aa) fasta scores: E(): FT 1e-22, 63.1% id in 103 aa, and to Salmonella typhimurium, FT and Salmonella typhi hypothetical protein YbjQ or STM0930 FT or STY0926 or t2003 SWALL:AAO69615 (EMBL:AE008739) (107 aa) FT fasta scores: E(): 1e-22, 63.1% id in 103 aa, and to FT Escherichia coli, Escherichia coli O6, and Escherichia coli FT O157:H7 hypothetical protein YbjQ or B0866 or C0999 or FT Z1099 or ECS0952 SWALL:YBJQ_ECOLI (SWALL:P75819) (107 aa) FT fasta scores: E(): 1.6e-22, 63.1% id in 103 aa" FT /db_xref="InterPro:IPR002765" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIM4" FT /protein_id="CAH06002.1" FT /translation="MLLATTPIIEGKRITTYYGIVSGETIIGANVFRDFFASIRDIVGG FT RSGSYEEVLREAKDTALKEMSEQARQMGANAVIGVDLDYETVGGSGSMLMVTASGTAVF FT LE" FT misc_feature 246538..246855 FT /note="Pfam match to entry PF01906 DUF74, Domain of unknown FT function DUF74, score 201.6, E-value 1e-57" FT CDS complement(246933..248525) FT /transl_table=11 FT /locus_tag="BF9343_0224" FT /old_locus_tag="BF0227" FT /product="putative exported alpha-galactosidase" FT /note="Similar to Coffea arabica alpha-galactosidase FT precursor SWALL:AGAL_COFAR (SWALL:Q42656) (378 aa) fasta FT scores: E(): 3.1e-31, 39.13% id in 368 aa, and to FT Bacteroides thetaiotaomicron alpha-galactosidase precursor FT BT4157 SWALL:AAO79262 (EMBL:AE016944) (606 aa) fasta FT scores: E(): 1.5e-105, 49.22% id in 518 aa, and to FT Bacteroides thetaiotaomicron alpha-galactosidase precursor FT BT2662 SWALL:AAO77769 (EMBL:AE016937) (507 aa) fasta FT scores: E(): 1.2e-90, 48.52% id in 509 aa" FT /db_xref="GOA:Q5LIM3" FT /db_xref="InterPro:IPR000111" FT /db_xref="InterPro:IPR002241" FT /db_xref="InterPro:IPR005084" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013780" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LIM3" FT /protein_id="CAH06003.1" FT /translation="MKKKKVTTYCCLLLLASFFTTVTAQNTNTPMMGWSSWNTFRVHIN FT EELIKETADAMVNRGLKDVGYGYVNIDDGYFGGRNSEGRLFANKKKFPNGMRVLSDYIH FT SKGLKAGIYSDAGSNTCGSIYDADTLGIGVGLWKHDDIDCQTFLKDWGYDFIKIDWCGG FT EATGQSEQQRYTDIYKAIRRTGRTDVRYNICRWQFPGTWATQLAGSWRIHTDINPRFTT FT IDRIIERNLYLAPYASPGHYNDMDMLEVGRGLTEDEEKTHFGIWSILSSPLMIGCDLRT FT IPEKTLSIITNKEVIALNQDSLGLQAEAIERGKDYLILSKAIQKREGKLRAVALYNRSN FT TDQQIRVDFDKLYLSGDVRVRDLWNHQEMGTFTDYYETLVPAHGTALIRLEGSKRHDRT FT CYEAEYAFMQEFLPDNKQAAHFTPKSGASGEYIMKNLGNSPSNWAEFRNVYISKGGDYQ FT LKLTYYSGDKRDIQIAVNGTEYKQSNLYSGTWDQAATTTIKVKLRTGYNTIRLYNSYGW FT APDIDKMEIIKGR" FT misc_feature complement(246942..247277) FT /note="Pfam match to entry PF03422 CBM_6, Carbohydrate FT binding module (family 6), score -1.3, E-value 0.0035" FT misc_feature complement(247512..248507) FT /note="Pfam match to entry PF02065 Melibiase, Melibiase, FT score -49.9, E-value 2.5e-11" FT misc_feature complement(248454..248507) FT /note="1 probable transmembrane helix predicted for BF0227 FT by TMHMM2.0 at aa 7-24" FT misc_feature complement(248454..248525) FT /note="Signal peptide predicted for BF0227 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.942 between residues 24 and 25" FT CDS complement(248617..250461) FT /transl_table=11 FT /locus_tag="BF9343_0225" FT /old_locus_tag="BF0228" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2858 SWALL:AAO77964 (EMBL:AE016937) (646 aa) FT fasta scores: E(): 2.6e-44, 36.5% id in 652 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT2904 FT SWALL:AAO78010 (EMBL:AE016938) (640 aa) fasta scores: E(): FT 6.1e-44, 34.38% id in 666 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT3013 SWALL:AAO78119 FT (EMBL:AE016938) (644 aa) fasta scores: E(): 3.4e-39, 35.84% FT id in 664 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LIM2" FT /protein_id="CAH06004.1" FT /translation="MKLKNIIVALLIGASLHSCDYLDIVPDDTPILADAFKNEQTAENF FT VFACYSFIPNYLNFRQNFSWCTTPETVGSAHWTTTWFTFMRMQQGLYNSADPIIDVWQS FT SYNGIRQCYTFLDNIDDVKPSQISEADLAAKKVLWKGEVKFLIAYYHYLLLQNYGPIVI FT LDEAIPLNAPKEELFKPRVPYDECVSRIAQMFDNASADLPMTVKASNYGRATKVIAQAL FT KARMYLYAASPQFNGNADMYKNFKNKDGQLLMNLTYDKNKWKTAMDECKKAIDMAHQAG FT AELYKYTKKGNLPEFNQAIANARNLVVDAWNKELIWGYSGWKETWADGNSIQTHVIPKG FT ISTSSGAPYGALGATAFSADMYLTKNGLPIDEDPEFDYAHRFTVAEGDSVAVLHRNREP FT RFYGSIGFNRGDYLINGDTINLKMRFKEQNGTRDAGSDQLYGSYAIAKLAHPETFVSGT FT SNSLVAFPFPIIRLGELYLDYAEAYFEYNGTLEGDALTYFNLIRQRAGIPNVEVSYKGL FT PSGDKLREVIHRERTIELMFEGHMSYDYRRWLIALKEWSGMENGMIGLNSYGTTNEEYY FT KNARLDAQPFIFRDEQYLSPIKQDYLNVNSNLVQNPGW" FT misc_feature complement(250408..250461) FT /note="Signal peptide predicted for BF0228 by SignalP 2.0 FT HMM (Signal peptide probability 0.966) with cleavage site FT probability 0.956 between residues 18 and 19" FT CDS complement(250476..253874) FT /transl_table=11 FT /locus_tag="BF9343_0226" FT /old_locus_tag="BF0229" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides fragilis FrrG SWALL:Q8VTA9 FT (EMBL:AF329100) (1137 aa) fasta scores: E(): 1.5e-44, FT 27.16% id in 1178 aa, and to Bacteroides thetaiotaomicron FT putative outer membrane protein, probably involved in FT nutrient binding BT3012 SWALL:AAO78118 (EMBL:AE016938) FT (1125 aa) fasta scores: E(): 6.4e-178, 43.82% id in 1125 FT aa, and to Bacteroides thetaiotaomicron putative outer FT membrane protein, probably involved in nutrient binding FT BT2905 SWALL:AAO78011 (EMBL:AE016938) (1067 aa) fasta FT scores: E(): 2.3e-150, 43.62% id in 1043 aa" FT /db_xref="GOA:Q5LIM1" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR011662" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LIM1" FT /protein_id="CAH06005.1" FT /translation="MKKKAIPCHKAGRITSFFLLISIFLLIPSITTPVYAVETYTQQTV FT FTLHATNKTVKEVFEYIEKNSEFVVLYSKDLLPVLQKKVSVSIDKQNVESILNILSKEA FT GLKYNINDRQITITKATAEAPQQEKKIKITGQVLDENGEGIPGANIVIKGNSTLGTVTN FT VEGNFTLMAPENSTLVASFIGYTPVEILLKGKKIVVFKLVPDAQSLEEVVVVGFGTQKK FT ASVVGAVQSIKPAELRVPSSNLSTSFAGRIAGVISMQRTGEPGADGANFWIRGAATFSG FT TTDPLIFIDGVEVSAGDMNAIPSEAIENFSILKDASATALYGARGANGVILITTRTGKD FT LEKARINVRIDNTFTAPTRTLKLADAVTAMKLRNEAILTRNPDGTPAFSDDKIQGTLEG FT RNQYVYPNVDWFDYMFKDYSMNQSANLNVMGGTKKVDYFISASINNDNGMLKKDPNNTF FT DNNIQNLRYSFQSNVGAWLTSSTKVNVRINSQIVNYNGPSTSMDDLYKYVMEAPSMYFA FT PVYPNINREDHTIFGNKSGGPIGSGGFSIYRNPYASMVQGSSKQSAYTINTAFELEQKL FT DFLTKGLNFKALVSFKNWSKTTVNRSFSPYFYELQNPQEQEDGSYLYDYNSISKGRTAL FT ETSTSTTGDRLMNLQATLNYQRMFGDKHDVGAMLVYLQREYNLNNPDNNYYNTLPERNQ FT GLAGRVTYAYDGRYLAEFNFGYNGSENFEKGSRYGFFPSLAVGYLISNEKFFEPLTKVI FT SNLKIRASYGLVGNADIGSNRFPYLTKVDLGGAGFVFGDQWQTSSNGATITTYGAEKVT FT WEIGKKYNVGFDLGLFNKLSLNVDFFREDRKDIFLRRNTIPAESGITGDLRPYGNLGKV FT RNQGVDMSLDYNHAVSKDFMISAKGTFTYAKNQYMEIDEPDYEYAYMSQVGRPLNQYKG FT YIALGLFKDQEEIDNSPKQILTGVVQPGDIKYADLNNDGKIDGNDQTYIGNPELPQISY FT GLGVSIQYKKWDASIFFQGVGKRSIMLSDIHPFGGESYGVMQFVADNHWTEANPNPEAM FT YPRLTNGKNNNNNPNSTYWLRDGSYIRLKNVELGYSYKFLRAYISGQNLLTFSKFKLWD FT PELYTSNGLKYPTQIMGSIGLQFTF" FT misc_feature complement(251541..251591) FT /note="PS00237 G-protein coupled receptors signature." FT misc_feature complement(253770..253838) FT /note="1 probable transmembrane helix predicted for BF0229 FT by TMHMM2.0 at aa 13-35" FT CDS complement(253890..254021) FT /transl_table=11 FT /locus_tag="BF9343_0227" FT /old_locus_tag="BF0230" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIM0" FT /protein_id="CAH06006.1" FT /translation="MFNLKKHTLLCRKKADKKRKSDNTPILSDSNDFLLNHKLLMIN" FT CDS complement(254040..255188) FT /transl_table=11 FT /locus_tag="BF9343_0228" FT /old_locus_tag="BF0231" FT /product="putative regulatory protein" FT /note="Similar to Bacteroides fragilis regulatory cluster FT gene FrrF SWALL:Q8VTB0 (EMBL:AF329100) (336 aa) fasta FT scores: E(): 2.1e-18, 34.27% id in 213 aa, and to FT Bacteroides thetaiotaomicron putative anti-sigma factor FT BT4635 SWALL:AAO79740 (EMBL:AE016946) (404 aa) fasta FT scores: E(): 3.2e-36, 35.26% id in 346 aa, and to FT Bacteroides thetaiotaomicron putative anti-sigma factor FT BT3518 SWALL:AAO78624 (EMBL:AE016941) (400 aa) fasta FT scores: E(): 6e-30, 33.73% id in 329 aa" FT /db_xref="InterPro:IPR006860" FT /db_xref="UniProtKB/TrEMBL:Q5LIL9" FT /protein_id="CAH06007.1" FT /translation="MRKNKFKSFASRLNKDGDHPEKISFESPEEQAEYDKLDFLWNRCL FT PEETGEPDIWAKVQAKINADNTPVRLALKSNKTARLFSILKYSAVAASVALLIGAGCFL FT LLNDEERHDLNKIAQSLQTEIPQDIKEVTLVVSDQKKIELDNNAQIVYSATGQVQVNSN FT KLVEDDIKEEYNQIIVPKGKRSQIVLADNSKIWINSGSKVIYPRAFEGKYREIYVEGEV FT YLNVTHDTSKPFIVNTSGFEVRVLGTSFNISAYKNQEKAAVVLVEGSVNVKDQQNHHIK FT MVPNEKVELNQEGISGKEKVNARDYISWIDGIWTLQGESLKQVLLRLQDYYGQNIRCDA FT EIENEQMFGKLFLNDDLNQVMKSILSILPAEYTMKNNVIYIE" FT misc_feature complement(254163..254651) FT /note="Pfam match to entry PF04773 FecR, FecR protein, FT score 28.1, E-value 4.6e-08" FT misc_feature complement(254871..254939) FT /note="1 probable transmembrane helix predicted for BF0231 FT by TMHMM2.0 at aa 84-106" FT CDS complement(255275..255838) FT /transl_table=11 FT /locus_tag="BF9343_0229" FT /old_locus_tag="BF0232" FT /product="putative ECF-type sigma factor" FT /note="Similar to Bacteroides fragilis ECF-type sigma FT factor RpoE SWALL:Q8VTB1 (EMBL:AF329100) (187 aa) fasta FT scores: E(): 1.5e-11, 28.65% id in 171 aa, and to FT Bacteroides thetaiotaomicron RNA polymerase ECF-type sigma FT factor BT2169 SWALL:AAO77276 (EMBL:AE016935) (182 aa) fasta FT scores: E(): 2.5e-12, 30.9% id in 165 aa, and to FT Bacteroides thetaiotaomicron RNA polymerase ECF-type sigma FT factor BT1877 SWALL:AAO76984 (EMBL:AE016933) (196 aa) fasta FT scores: E(): 3.3e-11, 28.96% id in 183 aa" FT /db_xref="GOA:Q5LIL8" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="InterPro:IPR014327" FT /db_xref="UniProtKB/TrEMBL:Q5LIL8" FT /protein_id="CAH06008.1" FT /translation="MVTITLYMNNNIEYISKIKKGEETSFRHFVNSYSKDLFYYAQCFV FT RSKETAEEVVSDVFLDVWRHREEIDEIKNIKAWLLTLTHNKAISYLRKAENSSEIASWE FT EIDDFQIIGNLQTPDEEMISKEEIAQINSLIQTLPPKCKVVFALAKIERLPYKEIADML FT NISVKTINVHVAKALEIISNGLKK" FT misc_feature complement(255290..255439) FT /note="Pfam match to entry PF04545 sigma70_r4, Sigma-70, FT region 4, score 41.8, E-value 1.3e-09" FT misc_feature complement(255314..255379) FT /note="Predicted helix-turn-helix motif with score FT 1853.000, SD 5.50 at aa 154-175, sequence FT LPYKEIADMLNISVKTINVHVA" FT misc_feature complement(255548..255754) FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 53.7, E-value 3.4e-13" FT CDS complement(256048..258207) FT /transl_table=11 FT /locus_tag="BF9343_0230" FT /old_locus_tag="BF0233" FT /product="putative exported alpha-galactosidase" FT /EC_number="3.2.1.22" FT /note="Similar to Bacillus stearothermophilus FT alpha-galactosidase AgaA SWALL:Q9ALJ4 (EMBL:AY013286) (729 FT aa) fasta scores: E(): 2.2e-65, 32.3% id in 650 aa, and to FT Bacteroides thetaiotaomicron alpha-galactosidase BT3131 FT SWALL:AAO78237 (EMBL:AE016939) (718 aa) fasta scores: E(): FT 2.8e-186, 62.22% id in 720 aa, and to Bacteroides FT thetaiotaomicron alpha-galactosidase BT2851 SWALL:AAO77957 FT (EMBL:AE016937) (721 aa) fasta scores: E(): 1.3e-185, FT 62.63% id in 720 aa. Note: Also similar to BF0498 (723 aa) FT fasta scores: E(): 9.6e-125, 44.693% identity in 716 aa FT overlap" FT /db_xref="GOA:Q5LIL7" FT /db_xref="InterPro:IPR000111" FT /db_xref="InterPro:IPR002252" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LIL7" FT /protein_id="CAH06009.1" FT /translation="MKKLLATLLILVACIHVNAQESRQIRISTDRTDLILEVAPDGRLY FT QSYLGDRLLNEQDLKNLSGSSRGWEVYPGSGGEDYFEPAVAITNNDGNLSTILRYVSSE FT QKAVEGGTETIIRMKDDQYPVDVTLHYVAYPKQNVIKTWSEIKHQQKKPVVLWRYASTM FT LYFSNQKYYLTEFSSDWAKEVQMSTQQLQPGKKILDTKLGSRAAMHMQPFFELGLEQPA FT QEHQGQVVLGTIGWTGNYQFTFEVDNEGNLRIIPAINPYASDYQLKANETFTTPEFIFT FT LSNNGTGEASRNLHNWARNYQLKDGKGDRMTLLNNWENTYFTFDEELLGKLMKEAKHLG FT VDMFLLDDGWFGNKHPRNDDHAGLGDWEAMKSKLPGGIPALVEKAKEAGVKFGIWIEPE FT MVNPKSDLFETHPEWAIHYPNRETYYFRNQLVLDLSNPKVQDFVFGVVDKIMTENPDVA FT FFKWDCNSPITNIYSPYLKDKQGQLYVDHVRGIYNVLKRVKEKYPNVPMMLCSGGGARC FT DYEALKYFTEFWCSDNTDPVERLFIQWGFSQFFPAKAMCAHVTSWNSKTSVKFRTDVAS FT MCKLGFDIGLKDMKADELTYCQEVVANYKRLKPVILDGDQYRLVSPYDGNHMAVMYTAP FT DASKAVLFTYDIHPRFGEKLLPVKLRGLDAQKMYRVKEINLMPGRKSNLSGNEKIFSGD FT YLMKIGLNAFTTSQTNSRVIELVAE" FT misc_feature complement(256210..257394) FT /note="Pfam match to entry PF02065 Melibiase, Melibiase, FT score 459.3, E-value 2.7e-135" FT misc_feature complement(258151..258207) FT /note="Signal peptide predicted for BF0233 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.993 between residues 19 and 20" FT CDS 258451..259005 FT /transl_table=11 FT /locus_tag="BF9343_0231" FT /old_locus_tag="BF0234" FT /product="putative lipoprotein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIL6" FT /protein_id="CAH06010.1" FT /translation="MKTGMKLIQGALFVLLFLFAACTPHRRPIPDEMIGEHRIHRADGL FT MTQDYRLSISPVNDSVYDIKLWERKSSSESPEKVYYDGLRFHYRDTVHIFTKRVTSGTE FT TYRVNRRRVTRDKNPRIWYTLKLSSTGFVMSDSLVERKGASDEQHRKLLYKRYGRLTFR FT EGKIIFLNSRCPAFYVKKEEK" FT misc_feature 258451..258513 FT /note="Signal peptide predicted for BF0234 by SignalP 2.0 FT HMM (Signal peptide probability 0.834) with cleavage site FT probability 0.481 between residues 21 and 22" FT misc_feature 258484..258516 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 259129..261333 FT /transl_table=11 FT /locus_tag="BF9343_0232" FT /old_locus_tag="BF0235" FT /product="putative inorganic pyrophosphatase" FT /note="Similar to Brucella suis inorganic pyrophosphatase FT (fragment) but extended at the N-terminus SWALL:Q8VRZ4 FT (EMBL:AF417512) (680 aa) fasta scores: E(): 9.2e-66, 43.63% FT id in 715 aa, and to entire Bacteroides thetaiotaomicron FT pyrophosphate-energized vacuolar membrane proton pump FT BT3411 SWALL:AAO78517 (EMBL:AE016940) (734 aa) fasta FT scores: E(): 0, 93.46% id in 734 aa, and to entire FT Acetabularia mediterranea inorganic pyrophosphatase FT SWALL:Q9STC8 (EMBL:D88820) (751 aa) fasta scores: E(): FT 6.8e-85, 46.5% id in 772 aa" FT /db_xref="GOA:Q5LIL5" FT /db_xref="InterPro:IPR004131" FT /db_xref="UniProtKB/TrEMBL:Q5LIL5" FT /protein_id="CAH06011.1" FT /translation="MDSILFWLVPFASVLALCFALYFHKQMMKESEGTPQMIKIAAAVR FT RGAMSYLKQQYKIVGWVFLGLVILFSVMAYGFQVQNAWVPIAFLTGGFFSGLSGFLGMK FT TATYASARTANAARTSLNAGLRIAFRSGAVMGLVVVGLGLLDISFWYLLLNWAIPADVL FT TPTHKLCIITTTMLTFGMGASTQALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRN FT PATIADNVGDNVGDVAGMGADLYESYCGSILATAALGAAAFIHTDDTVMQFKAVIAPML FT IAAIGIILSIIGIFSVRTKENATMKDLLGSLAWGTNLSSALIVAVTFFILWLLQLDNWM FT WISCAVVVGLVVGIVIGRSTEYYTSQSYRPTQKLSESGKTGPATVIISGIGLGMLSTAI FT PVVAVVIGIIASYLLASGFDFNNVGMGLYGIGIAAVGMLSTLGITLATDAYGPIADNAG FT GNAEMSSLGKEVRKRTDALDSLGNTTAATGKGFAIGSAALTGLALLASYIEEIRIGLTR FT LGNLVLTFPNGDTISTANATFVDFMNYYEVNLMNPKVLSGMFLGSMMAFLFCGLTMNAV FT GRAAGHMVDEVRRQFREMKGILTGETEPDYERCVAISTKGAQREMVVPSLIAIIAPILT FT GLIFGVPGVLGLLIGGLSSGFVLAIFMANAGGAWDNAKKYVEEGNFGGKGSEVHKATVV FT GDTVGDPFKDTSGPSLNILIKLMSMVAIVMAGLTVAWSLF" FT misc_feature 259132..261303 FT /note="Pfam match to entry PF03030 H_PPase, Inorganic H+ FT pyrophosphatase, score 1005.4, E-value 1.1e-299" FT misc_feature order(259138..259197,259300..259359,259369..259437, FT 259522..259590,259633..259701,259858..259926, FT 259954..260022,260059..260127,260140..260199, FT 260287..260355,260398..260466,260599..260652, FT 260788..260856,260992..261051,261061..261129, FT 261259..261327) FT /note="16 probable transmembrane helices predicted for FT BF0235 by TMHMM2.0 at aa 4-23, 58-77, 81-103, 132-154, FT 169-191, 244-266, 276-298, 311-333, 338-357, 387-409, FT 424-446, 491-508, 554-576, 622-641, 645-667 and 711-733" FT CDS 261582..262907 FT /transl_table=11 FT /locus_tag="BF9343_0233" FT /old_locus_tag="BF0237" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="InterPro:IPR006652" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR015915" FT /db_xref="UniProtKB/TrEMBL:Q5LIL4" FT /protein_id="CAH06012.1" FT /translation="MGKYLTLVIFLTFFDSSSLFSQVGGRIVDAKTKQPLVGANIYTDL FT GVGVSVADKKGEFMINNGELLRDADTLCFSFVGYCTKRFSVTSLLQKKNVILLQEEPFA FT LGEVTVYGIKKSYLRLPYTQISSMPVPLYSFAMISLEKKLYLTGGDRSQIKPPMGFSLT FT GSGGLPSGFVYEKYSNKIYVYDIISNTWTIINKKLRERAYHSALYNDGKIYVIGGKRFS FT TNRKIEYLDETVEIYDIHRDTLLTDPVNPHQAASAAAFVYDDKLIVMGGSTYRIENGWQ FT KYSDKIHMLDLKEGVWYEAGKMPLGMETNGILVGHTVFLFGGYRQRTLSDILTYDLITG FT LWRKRGKLWFSVGKAALARGGDKVYILENGVIQVYNLYTNEIKAYQIDLKLREGGLYCT FT DDKLIIVGGYSEGIDGKLGDAGVYEVRLSDFNRTELHLINRE" FT misc_feature 261972..262175 FT /note="Pfam match to entry PF01344 Kelch, Kelch motif, FT score 23.0, E-value 0.00061" FT misc_feature 262179..262334 FT /note="Pfam match to entry PF01344 Kelch, Kelch motif, FT score 22.5, E-value 0.00084" FT misc_feature 262338..262493 FT /note="Pfam match to entry PF01344 Kelch, Kelch motif, FT score 28.6, E-value 1.2e-05" FT misc_feature 262494..262628 FT /note="Pfam match to entry PF01344 Kelch, Kelch motif, FT score 7.9, E-value 0.35" FT CDS complement(262986..263201) FT /transl_table=11 FT /locus_tag="BF9343_0234" FT /old_locus_tag="BF0238" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIL3" FT /protein_id="CAH06013.1" FT /translation="MKNKRINVRHNNFISARMPVLTSPRTRPHGHRHAGRSRSQAIIAK FT DIKENKMLLTTFILKEGTTSISPSTV" FT CDS 263354..263959 FT /transl_table=11 FT /gene="rnhB" FT /locus_tag="BF9343_0235" FT /old_locus_tag="BF0239" FT /product="putative ribonuclease HII" FT /EC_number="3.1.26.4" FT /note="Similar to Escherichia coli ribonuclease HII RnhB or FT B0183 SWALL:RNH2_ECOLI (SWALL:P10442) (198 aa) fasta FT scores: E(): 2.6e-27, 51.13% id in 176 aa, and to FT Bacteroides thetaiotaomicron ribonuclease HII BT3412 FT SWALL:AAO78518 (EMBL:AE016940) (200 aa) fasta scores: E(): FT 3.8e-70, 87.87% id in 198 aa, and to Porphyromonas FT gingivalis ribonuclease HII RnhB SWALL:RNH2_PORGI FT (SWALL:Q51832) (168 aa) fasta scores: E(): 4.3e-38, 63.46% FT id in 156 aa" FT /db_xref="GOA:Q5LIL2" FT /db_xref="InterPro:IPR001352" FT /db_xref="InterPro:IPR012337" FT /db_xref="InterPro:IPR022898" FT /db_xref="InterPro:IPR024567" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIL2" FT /protein_id="CAH06014.1" FT /translation="MLLPWLNEELIEAGCDEAGRGCLAGAVYAAAVILPKDFENELLND FT SKQLSEKQRYALREVIERDAVAWAVGIVSPEEIDKINILNASFLAMHRAVDRLKTRPQH FT LLIDGNRFKKYPDIPHTTVIKGDGKYLSIAAASILAKTYRDDYMNKLHQEFPCYDWEHN FT KGYPTKKHRAAIAGHGTTPYHRMTFNLLGDGQLELFSK" FT misc_feature 263390..263926 FT /note="Pfam match to entry PF01351 RNase_HII, Ribonuclease FT HII, score 232.7, E-value 4.5e-67" FT CDS complement(263967..264893) FT /transl_table=11 FT /locus_tag="BF9343_0236" FT /old_locus_tag="BF0240" FT /product="putative cationic transporter" FT /note="Similar to Staphylococcus epidermidis cationic FT transporter se1958 SWALL:Q8CN83 (EMBL:AE016750) (315 aa) FT fasta scores: E(): 7.9e-27, 31.05% id in 293 aa, and to FT Bacteroides thetaiotaomicron mg2+/co2+ transporter BT3414 FT SWALL:AAO78520 (EMBL:AE016940) (309 aa) fasta scores: E(): FT 2.1e-105, 88.99% id in 309 aa, and to Clostridium FT acetobutylicum magnesium and cobalt transporter CAC0294 FT SWALL:Q97MA4 (EMBL:AE007544) (315 aa) fasta scores: E(): FT 9.7e-34, 37.28% id in 295 aa" FT /db_xref="GOA:Q5LIL1" FT /db_xref="InterPro:IPR002523" FT /db_xref="UniProtKB/TrEMBL:Q5LIL1" FT /protein_id="CAH06015.1" FT /translation="MRTYLYCEAGFVEKAQWLPNSWVNVVCPDSSDFKFLTETLKVPES FT FLNDIADTDERPRTETEGNWLLTILRIPVQNAQSSIPYTTVPIGIITNNEIIVSVCYHQ FT TDMIPDFIEHTRRKGIEVRNKLDLIFRLIYSSAVWFLKYLKQINIDITAAEKELERSIR FT NEDLLRLMKLQKTLVYFNTSIRGNEVMIGKLKTIFQDTDYLDEELVEDVIIELKQAFNT FT VNIYSDILTGTMDAFASIISNNVNAIMKRMTSLSITLMIPTLIASFYGMNVDIHLEEMP FT HAFLLIILVSVFLSALSFVIFRKIKWF" FT misc_feature complement(263970..264845) FT /note="Pfam match to entry PF01544 CorA, CorA-like Mg2+ FT transporter protein, score 41.9, E-value 1.3e-09" FT misc_feature complement(order(263988..264056,264084..264137)) FT /note="2 probable transmembrane helices predicted for FT BF0240 by TMHMM2.0 at aa 253-270 and 280-302" FT CDS 265179..266693 FT /transl_table=11 FT /gene="gpmI" FT /gene_synonym="pgmI" FT /locus_tag="BF9343_0237" FT /old_locus_tag="BF0241" FT /product="putative 2,3-bisphosphoglycerate-independent FT phosphoglycerate mutase" FT /EC_number="5.4.2.1" FT /note="Similar to Clostridium acetobutylicum FT 2,3-bisphosphoglycerate-independent phosphoglycerate mutase FT GpmI or Pgm-I or CAC0712 SWALL:GPMI_CLOAB (SWALL:Q97L53) FT (510 aa) fasta scores: E(): 8.5e-91, 49.7% id in 511 aa, FT and to Bacteroides thetaiotaomicron FT 2,3-bisphosphoglycerate-independent phosphoglycerate mutase FT BT3419 SWALL:AAO78525 (EMBL:AE016940) (504 aa) fasta FT scores: E(): 3.8e-176, 90.27% id in 504 aa, and to FT Methanosarcina acetivorans FT 2,3-bisphosphoglycerate-independent phosphoglycerate mutase FT 2 Gpmi2 or ma4007 SWALL:GMI2_METAC (SWALL:Q8TIY2) (521 aa) FT fasta scores: E(): 1.4e-91, 50.09% id in 505 aa" FT /db_xref="GOA:Q5LIL0" FT /db_xref="InterPro:IPR005995" FT /db_xref="InterPro:IPR006124" FT /db_xref="InterPro:IPR011258" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIL0" FT /protein_id="CAH06016.1" FT /translation="MSKKALLMILDGWGLGDHGKDDVIFNTATPYWDYLMETYPHSQLQ FT ASGENVGLPDGQMGNSEVGHLNIGAGRVVYQDLVKINLSCRDNSILKNPEIVSAFSYAK FT ENGKNVHFMGLTSDGGVHSSLDHLFKLCDIAKEYNIENTFVHCFMDGRDTDPKSGKGFI FT EQLEAHCAKSAGKVASIIGRYYAMDRDKRWERVKEAYDLLVNGIGKKATDMVQAMQESY FT DEGVTDEFIKPIVNAGVDGTIKEGDVVIFFNYRNDRAKELTVVLTQQDMPEAGMHTIPG FT LQYYCMTPYDASFKGVHILFDKENVVNTLGEYLAANGKKQLHIAETEKYAHVTFFFNGG FT RETPYDNEDRILVPSPKVATYDLKPEMSAYEVKDKLVAAINENKYDFIVVNYANGDMVG FT HTGIYEAIEKAVVAVDACVKDTIEAAKAQGYEAIIIADHGNADHALNEDGTPNTAHSLN FT PVPCVYVTENKEAKVADGRLADVAPTILHILDMVQPAEMTGCNLIK" FT misc_feature 266274..266621 FT /note="Pfam match to entry PF01676 Metalloenzyme, FT Metalloenzyme superfamily, score 129.0, E-value 7.6e-36" FT CDS 266842..267936 FT /transl_table=11 FT /locus_tag="BF9343_0238" FT /old_locus_tag="BF0242" FT /product="putative two-component system sensor kinase" FT /note="Similar to C terminus of Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase BT1597 SWALL:AAO76704 (EMBL:AE016932) (539 aa) fasta FT scores: E(): 5.7e-57, 49.53% id in 325 aa, and to C FT terminus of Bacteroides thetaiotaomicron putative FT two-component system sensor histidine kinase BT1800 FT SWALL:AAO76907 (EMBL:AE016933) (616 aa) fasta scores: E(): FT 1.4e-51, 44.76% id in 315 aa, and to C terminus of FT Bacteroides thetaiotaomicron two-component system sensor FT histidine kinase BT1237 SWALL:AAO76344 (EMBL:AE016931) (641 FT aa) fasta scores: E(): 7.5e-43, 41.75% id in 364 aa" FT /db_xref="GOA:Q5LIK9" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:Q5LIK9" FT /protein_id="CAH06017.1" FT /translation="MKQLILSGMFVVCGLSVSLASEKWAVDSINWHRAEQKMQEKDFQD FT AALTYKELITKGDSLFVDYAGRHVEDMREQYSIDELDLQNGMQQKKIWKLVFITILCLV FT VLLFVGLLYLRRAERKLLFSREELQKAKRLAEESVRNKSVFLSNMSHEIKTPLNALAGF FT SEILITPGIDDEVRAQCNDVIRLNSDLLLHLVNDVVDVSCLDVANMRFSVVPHEVVALC FT RNVVEMLRNIKQTSAEMIFETELSALEMETDPCRLQQVLINLLVNATKFTKEGYITLTL FT RINEAGVPEFMVTDTGCGIPLENQEAVFSRFEKLNEGIQGTGLGLPICKLIINRMGGDI FT RVDSTYSKGARFIFTHPLKQEENR" FT misc_feature 266842..266901 FT /note="Signal peptide predicted for BF0242 by SignalP 2.0 FT HMM (Signal peptide probability 0.995) with cleavage site FT probability 0.829 between residues 20 and 21" FT misc_feature 267115..267183 FT /note="1 probable transmembrane helix predicted for BF0242 FT by TMHMM2.0 at aa 92-114" FT misc_feature 267262..267462 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 56.5, E-value 4.8e-14" FT misc_feature 267595..267918 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 118.7, FT E-value 9.6e-33" FT CDS 267933..269876 FT /transl_table=11 FT /locus_tag="BF9343_0239" FT /old_locus_tag="BF0243" FT /product="putative two-component sensor histidine kinase" FT /note="Similar to C-terminus of Anabaena sp. Two-component FT regulator kinase HepK or ALL4496 SWALL:P70777 (EMBL:U68034) FT (575 aa) fasta scores: E(): 1.5e-06, 28.04% id in 189 aa, FT and to entire Bacteroides thetaiotaomicron putative FT two-component system sensor histidine kinase BT1598 FT SWALL:AAO76705 (EMBL:AE016932) (655 aa) fasta scores: E(): FT 3.9e-41, 26.09% id in 663 aa, and to entire Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase BT1801 SWALL:AAO76908 (EMBL:AE016933) (653 aa) fasta FT scores: E(): 3.4e-32, 23.93% id in 660 aa" FT /db_xref="GOA:Q5LIK8" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:Q5LIK8" FT /protein_id="CAH06018.1" FT /translation="MKRLVVLLFGLVGAALFMSAANSGDRVLRDSIFHVYRSMPADTTR FT TVFAKEAAMGHVKESWALELLDSALVFAREIKDVEGELELQYGIFRYYTFRMDGENMEK FT TCATLREACYRYKKYDNYFLALHYVLQLKGSEGDTEYAILESRKMREEAVRLHVDRGVF FT LSYITEGKSYVFARNTEKAIEQYLKALEIEGTTFGDKLMVHGYLASSYYLKDKYKEALG FT ELKAQRQLIDGVIKKKPSMLGVYRSTLLTIELMYCKIYLGMVDADPLWIHLNEAAKFYD FT DDCFSATAVNYHFSWAGYYYLRQDWERCFPEFERTLAAFKGTQPMYEIEIRRIMGDAYV FT DAGRYEEAARTYKTAAVMCDSVNKATLRMNEETVEANYRIRKALLDKELGEKRFLQVAV FT VGLSLFVVLLVWGVIRLIRIRGELVKSQKEMAESYAVVVATDKMKEFFLRNITDEIRVP FT LDTVVELSDRLCRETNLKQEKQQEYSATIKKCASKLIGLIFNVLDLARLESGMMKFVVE FT EYDVVQLCTDARLMVEMQTENRTKVDLHTEPDMLLIDVDTTWFMKMLASVLKYPEESEG FT LFRVKFILSRPSEDYLQIKVVNSPIFMTAESEKEFDVLHTINRLYLETFQGSYQLLEES FT GERMIIITYPVS" FT misc_feature order(267945..268004,269115..269183) FT /note="2 probable transmembrane helices predicted for FT BF0243 by TMHMM2.0 at aa 5-24 and 395-417" FT misc_feature 269259..269462 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 37.9, E-value 2e-08" FT CDS 270231..270812 FT /transl_table=11 FT /locus_tag="BF9343_0240" FT /old_locus_tag="BF0244" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3427 SWALL:AAO78533 (EMBL:AE016940) FT (193 aa) fasta scores: E(): 8.3e-69, 86.01% id in 193 aa, FT and to Chlorobium tepidum hypothetical protein CT1194 FT SWALL:Q8KD60 (EMBL:AE012880) (190 aa) fasta scores: E(): FT 5.1e-20, 35.35% id in 181 aa" FT /db_xref="InterPro:IPR021458" FT /db_xref="UniProtKB/TrEMBL:Q5LIK7" FT /protein_id="CAH06019.1" FT /translation="MIQIDNVVVSLDVLREKFVCNLDACKGECCIEGDAGAPVELEEVE FT KLEEVLPVVWDELSPEARAVIDKQGVVYTDRDGDLVTSIVNGKDCVFTCYDEKGYCYCA FT IEKAYRGGKTDFYKPVSCHLYPIRVGNYGPYQAVNYHRWDVCKAAVLLGKKENVPVYRF FT LKEPLIRKFGKEWYDELEIAVKELQDRGMI" FT CDS 270809..273775 FT /transl_table=11 FT /locus_tag="BF9343_0241" FT /old_locus_tag="BF0245" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron outer FT membrane assembly protein BT4129 SWALL:AAO79234 FT (EMBL:AE016943) (838 aa) fasta scores: E(): 4.5e-17, 20.65% FT id in 983 aa" FT /db_xref="InterPro:IPR007844" FT /db_xref="UniProtKB/TrEMBL:Q5LIK6" FT /protein_id="CAH06020.1" FT /translation="MNRQVKKTLKISGITLGTVLLVLLVAIAFVINFIVTPKKLTPVVL FT DAANQTLNAHLDMESVELTFFSTFPQFGLKVKNGSLVSKALNDSSWCKTDSLLSFKECV FT LTVNPIAYLTENRIVVHNLSLEEVAVYAYRNKAGKANWEVTRASADTIPADTASTDFNS FT EIDIRNIELKHANLVFDDRNTDIYSRIDDANLKLRLSLTKGISTLGLKFDNKNILFWQQ FT GELLVNKIATSLRTDIMVDRQTAVWKLKDTELDVNGIRLDVNGTFRRDTVAKTIGMDLE FT YGLHAPSMETVLRMIPKSYVKDSKVSAKGEVTVSGRVRGVYGDKKLPAVSLKIGIKEAS FT AQYKDLPYGIDEVTADFDAYVDLMRHQPSYLNLKIFHFKGAHTEVLADAKVDDLLDDPL FT ITFHTQSTVDLDALAKTFPLQESVTITGKLDADMGMKCRLSTLKKQDIGRMKLGGKLEL FT KDFELKDTAKDFDFLGNATFRFRDNETLQAQMDVRKLVLRSRFLSSDIERLVANVSSTN FT PQDTNRIVSLQCDMEVSKLRASMGDSIKLYSARTKAQAALGPQEVDVTKPAIDFSLRAD FT SLFFSAAGTRMAMNVAGIKMKADKLNDSLWMPKGIVGFNRLRFRTPEFGLPIRMSKTAV FT TVDGPKITLKNASVRIGRSNMTATGDMMGVYRAMTKGEKLTAHLSLTSDLIDCNQLINS FT LSFPEDTTEVLTDSVPSEMKLFVIPRNIDFELQTDLKKVIFEKMLFENVHGAVDIKNQA FT IHLEDLSIRALDADMKAVMVYKAGSPRGGYAGFDFKIRNINIAKLVDFVPALDTIVPML FT RSFKGRVMFDVAADARLDSAMNIRIPTLRSAIHIKGDSLVLMDGETFAEISKMLMFKNK FT KENVFDSISVNVTVHDGNVTVYPFLVEIDRYKAAVGGEQGLDMNFNYHISILKSPLPFK FT AGVNISGNLDKMKFRIGKAKYKDAVTPAAVHRVDSTRMNMGNEIVNRFRRVVLGRQPR" FT misc_feature 270809..270898 FT /note="Signal peptide predicted for BF0245 by SignalP 2.0 FT HMM (Signal peptide probability 0.991) with cleavage site FT probability 0.449 between residues 30 and 31" FT CDS complement(273876..275834) FT /transl_table=11 FT /locus_tag="BF9343_0242" FT /old_locus_tag="BF0246" FT /product="DNA gyrase subunit B" FT /note="Similar to previously sequenced Bacteroides fragilis FT DNA gyrase B subunit GyrB SWALL:Q9S1B0 (EMBL:AB017713) (653 FT aa) fasta scores: E(): 0, 98.77% id in 653 aa, and to FT Bacteroides thetaiotaomicron DNA gyrase subunit B BT3429 FT SWALL:AAO78535 (EMBL:AE016940) (653 aa) fasta scores: E(): FT 0, 95.09% id in 652 aa, and to Bacteroides fragilis DNA FT gyrase B subunit GyrB (fragment) but extended towards the N FT and C termini SWALL:Q9AQL5 (EMBL:AB048185) (477 aa) fasta FT scores: E(): 2.6e-184, 100% id in 477 aa" FT /db_xref="GOA:Q5LIK5" FT /db_xref="InterPro:IPR001241" FT /db_xref="InterPro:IPR002288" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR006171" FT /db_xref="InterPro:IPR011557" FT /db_xref="InterPro:IPR013506" FT /db_xref="InterPro:IPR013759" FT /db_xref="InterPro:IPR013760" FT /db_xref="InterPro:IPR014721" FT /db_xref="InterPro:IPR018522" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:Q5LIK5" FT /protein_id="CAH06021.1" FT /translation="MSEEQNPTNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHH FT LVYEIVDNSIDEALAGYCDHIEVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVAMTV FT LHAGGKFDKGSYKVSGGLHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYPVKE FT VGIADHTGTKQQFWPDDSIFTETIYDYKILASRLRELAYLNAGLRISLTDRRVVNEDGS FT FKHETFYSEEGLREFVRFIESSREHLINDVIYLNTEKQNIPIEVAIMYNTGFSENIHSY FT VNNINTIEGGTHLAGFRRALTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVA FT EPQFEGQTKTKLGNNEVMGAVDQAVGEVLNYYLEEHPKEAKAIVDKVILAATARHAARK FT AREMVQRKSPMSGGGLPGKLADCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQAILPL FT RGKILNVEKAMYHKALESEEIRNIYTALGVTIGTEEDSKAANIDKLRYHKIIIMTDADV FT DGSHIDTLIMTFFFRYMPQIIQNGYLYIATPPLYLCKKGKIEEYCWTDAQRQKFIDTYG FT GGSENAIHTQRYKGLGEMNAQQLWETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVG FT PRREFIEENATYANIDA" FT misc_feature complement(273909..274097) FT /note="Pfam match to entry PF00986 DNA_gyraseB_C, DNA FT gyrase B subunit, carboxyl terminus, score 147.7, E-value FT 1.7e-41" FT misc_feature complement(274212..274457) FT /note="Pfam match to entry PF01751 Toprim, Toprim domain, FT score 23.2, E-value 0.00016" FT misc_feature complement(274509..274535) FT /note="PS00177 DNA topoisomerase II signature." FT misc_feature complement(274626..275138) FT /note="Pfam match to entry PF00204 DNA_gyraseB, DNA gyrase FT B, score 273.1, E-value 3.1e-79" FT misc_feature complement(275292..275723) FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 108.1, FT E-value 1.5e-29" FT CDS complement(276015..276269) FT /transl_table=11 FT /gene="rpsT" FT /locus_tag="BF9343_0243" FT /old_locus_tag="BF0247" FT /product="30S ribosomal protein S20" FT /note="Similar to Salmonella typhimurium, and Salmonella FT typhi 30S ribosomal protein S20 RpsT or STM0043 or STY0052 FT or t0045 SWALL:RS20_SALTY (SWALL:P41787) (86 aa) fasta FT scores: E(): 0.00066, 38.37% id in 86 aa, and to FT Bacteroides thetaiotaomicron ribosomal protein S20 BT3430 FT SWALL:AAO78536 (EMBL:AE016940) (84 aa) fasta scores: E(): FT 5.2e-26, 90.47% id in 84 aa, and to Mycobacterium FT tuberculosis 30S ribosomal protein S20 RpsT or Rv2412 or FT MT2485 or MTCY253.08c SWALL:RS20_MYCTU (SWALL:P71731) (86 FT aa) fasta scores: E(): 3.9e-07, 45.34% id in 86 aa" FT /db_xref="GOA:Q5LIK4" FT /db_xref="InterPro:IPR002583" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIK4" FT /protein_id="CAH06022.1" FT /translation="MANHKSSIKRIRQEETRRLRNRYYGKTMRNAVRKLRSTTDKAEAT FT AMYPGIVKMVDKLAKTNVIHKNKANNLKSKLAIYINKLA" FT misc_feature complement(276024..276266) FT /note="Pfam match to entry PF01649 Ribosomal_S20p, FT Ribosomal protein S20, score 64.1, E-value 2.5e-16" FT tRNA complement(276306..276380) FT /note="tRNA Glu anticodon TTC, Cove score 50.05" FT CDS 276679..277407 FT /transl_table=11 FT /locus_tag="BF9343_0244" FT /old_locus_tag="BF0248" FT /product="possible DNA repair protein RecO" FT /note="Limited similarity to Bacillus subtilis DNA repair FT protein RecO SWALL:RECO_BACSU (SWALL:P42095) (255 aa) fasta FT scores: E(): 0.00079, 24.03% id in 258 aa, and to FT Bacteroides thetaiotaomicron DNA repair protein BT3431 FT SWALL:Q8A275 (EMBL:AE016940) (242 aa) fasta scores: E(): FT 6.9e-87, 83.05% id in 242 aa, and to Bacteroides forsythus FT hypothetical protein SWALL:AAO33829 (EMBL:AY184490) (208 FT aa) fasta scores: E(): 9.1e-33, 43.75% id in 208 aa" FT /db_xref="GOA:Q5LIK3" FT /db_xref="InterPro:IPR001164" FT /db_xref="InterPro:IPR003717" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR022572" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIK3" FT /protein_id="CAH06023.1" FT /translation="MLQKTVGIVLHVLKYNDTSNIVEMYTELSGRASFLVTVPRSKKAT FT VKSVLFQPLALIEFEADYRPNTSLFRIKEAKSFSPFTSIPYDPFKSAIALFLAEFLYRA FT IREEAENRPLFAYLQHSILWLDTCKISFANFHLVFLMRLSRFLGLYPNLDDYHAGDYFD FT MLNATFTSVRPQLHSSYIQPDEAGRLLQLMRMNYETMHLFGMNRTERARCLAIINEYYR FT LHLPDFPILKSLDVLKELFD" FT misc_feature 276679..277326 FT /note="Pfam match to entry PF02565 RecO, Recombination FT protein O, score -37.2, E-value 0.00019" FT CDS complement(277517..277966) FT /transl_table=11 FT /locus_tag="BF9343_0245" FT /old_locus_tag="BF0249" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein with a conserved domain BT3443 FT SWALL:AAO78549 (EMBL:AE016940) (135 aa) fasta scores: E(): FT 3.5e-36, 91.85% id in 135 aa, and to Chlorobium tepidum FT hypothetical protein CT0607 SWALL:Q8KES5 (EMBL:AE012834) FT (152 aa) fasta scores: E(): 3e-15, 42.66% id in 150 aa, and FT to Myxococcus xanthus hypothetical 18.5 kDa protein FT SWALL:Q50854 (EMBL:U20669) (175 aa) fasta scores: E(): FT 3e-14, 43.15% id in 146 aa" FT /db_xref="GOA:Q5LIK2" FT /db_xref="InterPro:IPR003789" FT /db_xref="InterPro:IPR019004" FT /db_xref="InterPro:IPR023168" FT /db_xref="UniProtKB/TrEMBL:Q5LIK2" FT /protein_id="CAH06024.1" FT /translation="MDLFERVSEDIKNAMKAKDKVALETLRNVKKFFLEAKTAPGANDT FT LTDADALKIVQKLVKQGKDAAEIYIGQGRQDLADAELAQVQVMETYLPKQMSAEELEAA FT LKEIIAEVGATSGKDMGKVMGVASKKLAGLAEGRAISAKVKELLG" FT misc_feature complement(277523..277951) FT /note="Pfam match to entry PF02637 GatB_Yqey, GatB/Yqey FT domain, score 65.9, E-value 7.1e-17" FT CDS complement(278041..279351) FT /transl_table=11 FT /gene="ftsZ" FT /locus_tag="BF9343_0246" FT /old_locus_tag="BF0250" FT /product="putative cell division protein" FT /note="Similar to Prevotella albensis cell division protein FT FtsZ SWALL:Q9S344 (EMBL:AJ249201) (438 aa) fasta scores: FT E(): 3.2e-86, 59.55% id in 445 aa, and to Bacteroides FT thetaiotaomicron cell division protein FtsZ BT3444 FT SWALL:AAO78550 (EMBL:AE016940) (435 aa) fasta scores: E(): FT 4.9e-141, 93.8% id in 436 aa, and to Porphyromonas FT gingivalis cell division protein FtsZ SWALL:FTSZ_PORGI FT (SWALL:O08466) (457 aa) fasta scores: E(): 4.2e-68, 52.02% FT id in 419 aa" FT /db_xref="GOA:Q5LIK1" FT /db_xref="InterPro:IPR000158" FT /db_xref="InterPro:IPR003008" FT /db_xref="InterPro:IPR008280" FT /db_xref="InterPro:IPR018316" FT /db_xref="InterPro:IPR020805" FT /db_xref="InterPro:IPR024757" FT /db_xref="UniProtKB/TrEMBL:Q5LIK1" FT /protein_id="CAH06025.1" FT /translation="MDEIVQFDFPTDSPKIIKVIGVGGGGGNAVNHMYREGIHDVTFVL FT CNTDNQALAESPVPVKLQLGRSITQGLGAGNRPERARDAAEESIEDIKTLLNDGTKMVF FT ITAGMGGGTGTGAAPVIARIAKEMDILTVGIVTIPFIFEGEKKIIQALDGVERIAQHVD FT ALLVINNERLREIYSDLTFMNAFGKADDTLSIAAKSIAEIITMRGTVNLDFADVKTILK FT DGGVAIMSTGFGEGENRVTKAIDDALHSPLLNNNDIFNAKKVMLNVSFCPASELMMEEM FT NEVHEFMSKFREGVEVIWGVAMDNSLDTKVKITVLATGFGVEDVPGMDDLHEKRSQEEE FT ERQLQLEEEKEKNKERIRKAYGESASGIGTRNLRKRRHIYLFNAEDLDNDDIIAMVEDS FT PTYLRDKTTLGKIKAKAALEEEIATEEAIDDSGVITF" FT misc_feature complement(278341..278724) FT /note="Pfam match to entry PF03953 tubulin_C, Tubulin/FtsZ FT family, C-terminal domain, score 35.4, E-value 1.1e-07" FT misc_feature complement(278728..279309) FT /note="Pfam match to entry PF00091 tubulin, Tubulin/FtsZ FT family, GTPase domain, score 264.2, E-value 1.5e-76" FT misc_feature complement(278986..279051) FT /note="PS01135 FtsZ protein signature 2." FT CDS complement(279378..280808) FT /transl_table=11 FT /gene="ftsA" FT /locus_tag="BF9343_0247" FT /old_locus_tag="BF0251" FT /product="putative cell division protein" FT /note="Similar to Prevotella albensis cell division protein FT FtsA SWALL:Q9S345 (EMBL:AJ249201) (481 aa) fasta scores: FT E(): 1.6e-60, 44.19% id in 482 aa, and to Bacteroides FT thetaiotaomicron cell division protein FtsA BT3445 FT SWALL:AAO78551 (EMBL:AE016940) (483 aa) fasta scores: E(): FT 7e-110, 73.51% id in 487 aa, and to Porphyromonas FT gingivalis cell division protein FtsA SWALL:FTSA_PORGI FT (SWALL:O07827) (456 aa) fasta scores: E(): 1.2e-25, 28.73% FT id in 449 aa" FT /db_xref="GOA:Q5LIK0" FT /db_xref="InterPro:IPR003494" FT /db_xref="InterPro:IPR020823" FT /db_xref="UniProtKB/TrEMBL:Q5LIK0" FT /protein_id="CAH06026.1" FT /translation="MATTDFIAAIELGSSKIAGIAGKKNSDGSIQVLAYAREDSSSFIR FT KGVIYNLDKTAQSLTSIINKLEGALNNSIAKIYVGIGGQSLRTVRNVVSRDLEEETIIS FT QELVDSICDENLEIPLIDMDILDVAPQEYKIGNNLQADPVGVAGSHIEGRFLNIVARAS FT LKKNLERCFEQAKIEIADLLISPLVTADAVLTESERRSGCALIDFGADTSTISIYKNNI FT LRFLTVLPLGGNSITHDLVSLQMEEEEAERLKIRYGNAFYEEEEGEEPATCQLEDGNRT FT IELGKLNNIIEARTEEIIANVWNQIQLSGYDDKLLAGLIITGGAANLKDLDEVLRKRSK FT IEKVRNARFVRNTIHADEDVVKKDGTQNTLFGLLIAGNENCCLLETPAPQPHIQPQPQP FT EPVNMFEEDESLKEQEAAARAAKKKKEEEEKKRKEEEKQRKLEEKKRREEERRNKPNWF FT KSTFDKLSNEIFSDEDMK" FT misc_feature complement(279687..280223) FT /note="Pfam match to entry PF02491 FtsA, Cell division FT protein FtsA, score 103.9, E-value 2.7e-28" FT misc_feature complement(280227..280790) FT /note="Pfam match to entry PF02491 FtsA, Cell division FT protein FtsA, score 82.0, E-value 1.1e-21" FT CDS complement(280885..281625) FT /transl_table=11 FT /gene="ftsQ" FT /locus_tag="BF9343_0248" FT /old_locus_tag="BF0252" FT /product="putative cell division protein" FT /note="Similar to Porphyromonas gingivalis cell division FT protein FtsQ SWALL:O07826 (EMBL:AB004555) (282 aa) fasta FT scores: E(): 1e-21, 27.27% id in 242 aa, and to Bacteroides FT thetaiotaomicron cell division protein FtsQ BT3446 FT SWALL:AAO78552 (EMBL:AE016940) (248 aa) fasta scores: E(): FT 7.6e-77, 78.36% id in 245 aa, and to fragment of Prevotella FT albensis cell division protein FtsQ (fragment) SWALL:Q9S346 FT (EMBL:AJ249201) (141 aa) fasta scores: E(): 7.9e-07, 46.61% FT id in 133 aa" FT /db_xref="GOA:Q5LIJ9" FT /db_xref="UniProtKB/TrEMBL:Q5LIJ9" FT /protein_id="CAH06027.1" FT /translation="MIKRILLTIVMLLLIAYLIAAVTVFNDKPAHQVCRDMELVIKDTL FT NAGFVTKNEVAAILQKKGIYPVGKKMDRVHTKTLEKELDKHPLINEAQCYKTPNGKICV FT EVTQRVPILHIMSSNGENYYLDNKGKMMPPDAKCVAHRAIVTGNVEKSFAMKDLYKFGV FT FLQNNPFWEAQIVQINVLPGKEIELVPRVGNHIIYLGKLEHFEDKLKRLKTFYEKGLNQ FT VGWNKYSRISLEFGNQIICTKKKQ" FT misc_feature complement(281554..281613) FT /note="1 probable transmembrane helix predicted for BF0252 FT by TMHMM2.0 at aa 5-24" FT CDS complement(281657..283051) FT /transl_table=11 FT /gene="murC" FT /locus_tag="BF9343_0249" FT /old_locus_tag="BF0253" FT /product="putative UDP-N-acetylmuramate--L-alanine ligase" FT /EC_number="6.3.2.8" FT /note="Similar to Porphyromonas gingivalis FT UDP-N-acetylmuramate--L-alanine ligase MurC FT SWALL:MURC_PORGI (SWALL:Q51831) (433 aa) fasta scores: E(): FT 1.6e-91, 54.65% id in 430 aa, and to Bacteroides FT thetaiotaomicron UDP-N-acetylmuramate--alanine ligase FT BT3447 SWALL:AAO78553 (EMBL:AE016940) (467 aa) fasta FT scores: E(): 1.1e-156, 90.02% id in 451 aa, and to FT Haemophilus influenzae UDP-N-acetylmuramate--L-alanine FT ligase MurC or HI1139 SWALL:MURC_HAEIN (SWALL:P45066) (475 FT aa) fasta scores: E(): 7.6e-42, 31.55% id in 469 aa" FT /db_xref="GOA:Q5LIJ8" FT /db_xref="InterPro:IPR000713" FT /db_xref="InterPro:IPR004101" FT /db_xref="InterPro:IPR005758" FT /db_xref="InterPro:IPR013221" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q5LIJ8" FT /protein_id="CAH06028.1" FT /translation="MNIETIQSVYFVGAGGIGMSALVRYFLSKGKVVAGYDRTPSELTQ FT HLIEEGAQIHYEENIDLIPEACKDKATTLVVLTPAVPQEHAELTYFRDNGFEIQKRAQV FT LGTITRSSKGLCVAGTHGKTTTSTMTAHLFHQSHVGCTAFLGGISKNYGTNLLLSSTSP FT YTVIEADEFDRSFHWLSPYMSVITATDPDHLDIYGTEQAYLESFEHYTTLIQPGGALII FT RKGISLQPKVKEGVKMYTYSRDEGDFHAENIRIGNGEIFIDFVGPDIRIDNIQLGVPVS FT INIENGVAAMALAHLNGVTPEEIKQGMASFRGVDRRFDFKIKNNRIVFLSDYAHHPSEI FT KQSVMSMRELYRDKKITAVFQPHLYTRTRDFYKDFADSLSLLDEVILVDIYPAREQPIP FT GVSSRLIYDNLRPGIEKSMCKKEEILDVLKAKHIEVLITLGAGDIDNYVPGICDLLSRR FT MVPSDN" FT misc_feature complement(281843..282112) FT /note="Pfam match to entry PF02875 Mur_ligase_C, Mur ligase FT family, glutamate ligase domain, score 90.2, E-value FT 3.6e-24" FT misc_feature complement(282134..282919) FT /note="Pfam match to entry PF01225 Mur_ligase, Mur ligase FT family, catalytic domain, score 160.5, E-value 2.4e-45" FT misc_feature complement(282968..283027) FT /note="1 probable transmembrane helix predicted for BF0253 FT by TMHMM2.0 at aa 9-28" FT CDS complement(283048..284214) FT /transl_table=11 FT /gene="murG" FT /locus_tag="BF9343_0250" FT /old_locus_tag="BF0254" FT /product="probable FT UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) FT pyrophosphoryl-undecaprenol N-acetylglucosamine FT transferase" FT /EC_number="2.4.1.227" FT /note="Similar to Bacillus halodurans FT UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) FT pyrophosphoryl-undecaprenol N-acetylglucosamine transferase FT MurG or BH2565 SWALL:MURG_BACHD (SWALL:Q9K9T0) (363 aa) FT fasta scores: E(): 1.1e-45, 36.61% id in 366 aa, and to FT Bacteroides thetaiotaomicron FT UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) FT pyrophosphoryl-undecaprenol N-acetylglucosamine transferase FT BT3448 SWALL:AAO78554 (EMBL:AE016940) (372 aa) fasta FT scores: E(): 3.2e-113, 83.28% id in 365 aa, and to FT Enterococcus hirae FT UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) FT pyrophosphoryl-undecaprenol N-acetylglucosamine transferase FT MurG SWALL:MURG_ENTHR (SWALL:O07670) (360 aa) fasta scores: FT E(): 1.8e-43, 36.48% id in 370 aa." FT /db_xref="GOA:Q5LIJ7" FT /db_xref="InterPro:IPR004276" FT /db_xref="InterPro:IPR006009" FT /db_xref="InterPro:IPR007235" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIJ7" FT /protein_id="CAH06029.1" FT /translation="MMLNLKSNMNKENNKEGQGDALRVIISGGGTGGHIFPAVSIANAI FT KELRPDAQILFVGAEGRMEMQRVPDAGYQIIGLPVAGFDRKHLWKNVAVLLKLVRSQWK FT ARNIIRQFRPQVAVGVGGYASGPTLKMAGMMGVPTLIQEQNSYAGVTNKLLAQKARRIC FT VAYDGMEKFFPANKIIMTGNPVRQNLLAEKPEREQAIRSFGLNPEKKTILILGGSLGAR FT TINNTLIAGLQLIRRTTDVQFIWQTGKIYHQQVTEAVKAAGEIPNLFVTDFIKDMAAAY FT AAADLVISRAGAGSISEFCLLNKPVILVPSPNVAEDHQTKNALALVNKQAAIYVKDAEA FT ENKLLPVALETIANAEKLSELSENIAHLALPDSAVVIAKEVIKLAQQS" FT misc_feature complement(283084..283584) FT /note="Pfam match to entry PF04101 Glyco_tran_28_C, FT Glycosyltransferase family 28 C-terminal domain, score FT 127.5, E-value 2e-35" FT misc_feature complement(283723..284145) FT /note="Pfam match to entry PF03033 Glyco_transf_28, FT Glycosyltransferase family 28 N-terminal domain, score FT 99.8, E-value 4.5e-27" FT CDS complement(284192..285487) FT /transl_table=11 FT /gene="ftsW" FT /locus_tag="BF9343_0251" FT /old_locus_tag="BF0255" FT /product="putative transmembrane rod-shape determining FT protein" FT /note="Similar to Streptococcus thermophilus RodA FT SWALL:Q8L331 (EMBL:AF399832) (416 aa) fasta scores: E(): FT 5.9e-21, 25.51% id in 392 aa, and to Bacteroides FT thetaiotaomicron rod shape-determining protein RodA BT3449 FT SWALL:Q8A257 (EMBL:AE016940) (438 aa) fasta scores: E(): FT 4.2e-142, 82.67% id in 433 aa, and to Porphyromonas FT gingivalis cell division protein FtsW, putative PG0579 FT SWALL:AAQ65766 (EMBL:AE017174) (418 aa) fasta scores: E(): FT 4.2e-46, 37.89% id in 409 aa" FT /db_xref="GOA:Q5LIJ6" FT /db_xref="InterPro:IPR001182" FT /db_xref="UniProtKB/TrEMBL:Q5LIJ6" FT /protein_id="CAH06030.1" FT /translation="MDLLKNIFKGDKVIWIIFLCLCLISIIEVFSAASTLTYKSGDHWG FT PITQHSIILMVGAVVVVLMHNIPYKWFQVFPVFLYPISVVLLAFVTLMGVITGDRVNGA FT ARWMSFMGLQFQPSELAKMAVIIAVSFILSKKQDDEGANPKAFKYIMILTGLVCMLIAP FT ENLSTAMLLFGVVVLMMFIGRVAFKKLAMLLGGLALVGCLGAVFLLAIPKDTDIPFLHR FT FDTWKSRITNFTEKEEVPAAKFDIDKDAQIAHARIAIATSNVIGKAPGNSIQRDFLSQA FT FSDFIFAIIIEELGLVGGAFVVILYIWLLVRTGRIAQKCERTFPAFLVMGIALMLVSQA FT ILNMMVAVGLFPVTGQPLPLISKGGTSTLINCAYIGMILSVSRYTAYLEEKKENPAPLL FT TQSEGNETIASEAQTAAEPTAEVLNSDAKFEE" FT misc_feature complement(284327..285457) FT /note="Pfam match to entry PF01098 FTSW_RODA_SPOVE, Cell FT cycle protein, score 204.0, E-value 2e-58" FT misc_feature complement(order(284342..284410,284453..284521, FT 284558..284626,284852..284920,284933..284986, FT 284999..285052,285089..285157,285200..285268, FT 285281..285349,285392..285451)) FT /note="10 probable transmembrane helices predicted for FT BF0255 by TMHMM2.0 at aa 13-32, 47-69, 74-96, 111-133, FT 146-163, 168-185, 190-212, 288-310, 323-345 and 360-382" FT misc_feature complement(284777..284827) FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT CDS complement(285546..286880) FT /transl_table=11 FT /gene="murD" FT /locus_tag="BF9343_0252" FT /old_locus_tag="BF0256" FT /product="putative UDP-N-acetylmuramoylalanine--D-glutamate FT ligase" FT /EC_number="6.3.2.9" FT /note="Similar to Bacillus subtilis FT UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD FT SWALL:MURD_BACSU (SWALL:Q03522) (451 aa) fasta scores: E(): FT 1.3e-43, 35.63% id in 449 aa, and to Bacteroides FT thetaiotaomicron UDP-N-acetylmuramoylalanine--D-glutamate FT ligase BT3450 SWALL:Q8A256 (EMBL:AE016940) (413 aa) fasta FT scores: E(): 1.1e-143, 91.52% id in 413 aa, and to FT Thermoanaerobacter tengcongensis FT UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD or FT TTE1647 SWALL:MURD_THETN (SWALL:Q8R9G4) (450 aa) fasta FT scores: E(): 4.7e-48, 38.22% id in 450 aa" FT /db_xref="GOA:Q5LIJ5" FT /db_xref="InterPro:IPR004101" FT /db_xref="InterPro:IPR005762" FT /db_xref="InterPro:IPR013221" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIJ5" FT /protein_id="CAH06031.1" FT /translation="MKRIVVLGAGESGAGAAVLAKVKGFDTFVSDMSAIKDKYKTLLDG FT HGIAWEEGRHTEEQILSADEVVKSPGIPNDAPLILRLREQGTPIISEIEFAGRYTDAKM FT ICITGSNGKTTTTSLIYHIFKSAGLNVGLAGNIGKSLALQVAEEKHDYYVIELSSFQLD FT NMYNFRADIAVLMNITPDHLDRYDHCMQNYINAKFRITQNQTSEDAFIFWNDDPIIKRE FT LDKHGIRAHLYPFSAIKEEGSIAYVEDHEVVITEPIAFNMEQEQLALTGQHNLYNSLAA FT GISANLAGITKEDIRKALSDFQGVEHRLEKVARVRGIDFINDSKATNVNSCWYALQSMT FT TKTVLILGGKDKGNDYTEIEELVREKCSALVYLGLHNEKLHEFFDRLGLPVAEVQTGMK FT DAVEAAYKLAKKGETVLLSPCCASFDLFKSYEDRGEQFKKYVREL" FT misc_feature complement(285735..285968) FT /note="Pfam match to entry PF02875 Mur_ligase_C, Mur ligase FT family, glutamate ligase domain, score 25.2, E-value FT 7.1e-05" FT misc_feature complement(285990..286766) FT /note="Pfam match to entry PF01225 Mur_ligase, Mur ligase FT family, catalytic domain, score 168.4, E-value 1e-47" FT CDS complement(287020..288288) FT /transl_table=11 FT /gene="mraY" FT /locus_tag="BF9343_0253" FT /old_locus_tag="BF0257" FT /product="putative FT UDP-N-acetylmuramoyl-pentapeptide:undecaprenyl-phosphate-ph FT osphatase" FT /EC_number="2.7.8.13" FT /note="Similar to Pasteurella multocida FT phospho-N-acetylmuramoyl-pentapeptide-transferase MraY or FT PM0139 SWALL:MRAY_PASMU (SWALL:P57816) (360 aa) fasta FT scores: E(): 7.3e-26, 34.97% id in 426 aa, and to FT Bacteroides thetaiotaomicron FT phospho-N-acetylmuramoyl-pentapeptide-transferase BT3451 FT SWALL:Q8A255 (EMBL:AE016940) (422 aa) fasta scores: E(): FT 3.5e-159, 95.02% id in 422 aa, and to Porphyromonas FT gingivalis FT phospho-N-acetylmuramoyl-pentapeptide-transferase MraY or FT PG0577 SWALL:AAQ65764 (EMBL:AE017174) (419 aa) fasta FT scores: E(): 8.7e-97, 58.72% id in 424 aa" FT /db_xref="GOA:Q5LIJ4" FT /db_xref="InterPro:IPR000715" FT /db_xref="InterPro:IPR003524" FT /db_xref="InterPro:IPR018480" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIJ4" FT /protein_id="CAH06032.1" FT /translation="MLYYLFEWLHKLNFPGAGMFGYTSFRALMAIILALLISSIWGDKF FT INLLKRKQITETQRDAKIDPFGVNKVGVPSMGGVIIIVAILIPCLLLGKLHNIYMILML FT ITTVWLGSLGFADDYIKIFKKDKEGLHGKFKIIGQVGLGLIVGLTLYLSPDVVIRENIE FT VQKSENEIEVIHGTHDLKSTQTTIPFFKSNNLDYADLVGFMGEHAQTAGWILFVIITIF FT VVTAVSNGANLNDGMDGMAAGNSAIIGLTLGILAYVSSHIEFAGYLNIMYIPGSEELVI FT FICAFIGALIGFLWYNAYPAQVFMGDTGSLTIGGIIAVFAIIIHKELLIPILCGIFLVE FT NLSVLLQRFYYKAGKRKGIKQRLFKRAPIHDHFRTSMSLVEPGCSVKFTKPDQLFHESK FT ITVRFWIVTIVLAAITIITLKIR" FT misc_feature complement(order(287032..287091,287236..287304, FT 287314..287382,287401..287454,287512..287571, FT 287590..287658,287815..287883,287944..287997, FT 288010..288078,288163..288231)) FT /note="10 probable transmembrane helices predicted for FT BF0257 by TMHMM2.0 at aa 20-42, 71-93, 98-115, 136-158, FT 211-233, 240-259, 279-296, 303-325, 329-351 and 400-419" FT misc_feature complement(287299..287991) FT /note="Pfam match to entry PF00953 Glycos_transf_4, FT Glycosyl transferase, score 148.7, E-value 8.9e-42" FT CDS complement(288374..289831) FT /transl_table=11 FT /gene="murE" FT /gene_synonym="murE2" FT /locus_tag="BF9343_0254" FT /old_locus_tag="BF0258" FT /product="probable FT UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate FT ligase" FT /EC_number="6.3.2.13" FT /note="Similar to Thermoanaerobacter tengcongensis FT UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate FT ligase MurE or MurE2 or TTE1649 SWALL:MURE_THETN FT (SWALL:Q8R9G2) (492 aa) fasta scores: E(): 1.9e-61, 39.91% FT id in 486 aa, and to Bacteroides thetaiotaomicron FT UDP-N-acetylmuramoylalanyl-D-glutamate--2, FT 6-diaminopimelate ligase BT3452 SWALL:AAO78558 FT (EMBL:AE016940) (482 aa) fasta scores: E(): 3.2e-161, FT 90.66% id in 482 aa, and to Clostridium tetani FT UDP-N-acetylmuramoylalanyl-D-glutamate--2, FT 6-diaminopimelate ligase CTC01632 SWALL:AAO36175 FT (EMBL:AE015941) (485 aa) fasta scores: E(): 4.1e-65, 42.74% FT id in 489 aa" FT /db_xref="GOA:Q5LIJ3" FT /db_xref="HSSP:1E8C" FT /db_xref="InterPro:IPR000713" FT /db_xref="InterPro:IPR004101" FT /db_xref="InterPro:IPR005761" FT /db_xref="InterPro:IPR013221" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIJ3" FT /protein_id="CAH06033.1" FT /translation="MKLKEILTSIQPVKITGNQDIEITGVDIDSRQVESGHLFMAMHGT FT QTDGHAYIPAAVEKGATAILCEELPAELAEGVTYIQVADSEDAVGKAATTFYGNPSSKL FT ELVGVTGTNGKTTIATLLYNTFRYFGYKVGLISTVCNYIDDEAIPTEHTTPDPITLNRL FT LGRMADEGCKYVFMEVSSHSIAQKRISGLRFAGGIFTNLTRDHLDYHKTVENYLKAKKK FT FFDDMPKNSFSLTNLDDKNGLVMTQNTKSKVYTYSLRSLSDFKGRVLESHFEGMLLDFN FT NHELAVQFIGKFNASNLLAVFGAAVLLGKKEEDVLVALSTLHPVAGRFDAIRSPQGYTA FT IVDYAHTPDALVNVLNAIHGVLEGKGKVITVVGAGGNRDKGKRPIMAKEAARASDRVII FT TSDNPRFEEPQDIINDMLAGLDTEDKKKTLSIADRKEAIRTACMLAEKGDVILVAGKGH FT ENYQDIKGVKHHFDDKEVLKEIFSLTV" FT misc_feature complement(288587..288859) FT /note="Pfam match to entry PF02875 Mur_ligase_C, Mur ligase FT family, glutamate ligase domain, score 98.9, E-value FT 8.7e-27" FT misc_feature complement(288881..289729) FT /note="Pfam match to entry PF01225 Mur_ligase, Mur ligase FT family, catalytic domain, score 176.7, E-value 3.2e-50" FT CDS complement(289849..291948) FT /transl_table=11 FT /gene="ftsI" FT /gene_synonym="pbpB" FT /locus_tag="BF9343_0255" FT /old_locus_tag="BF0259" FT /product="putative cell division specific FT transpeptidase/penicillin-binding protein" FT /note="Similar to Bacillus subtilis penicillin-binding FT protein PbpB or BSU15160 SWALL:PBPB_BACSU (SWALL:Q07868) FT (716 aa) fasta scores: E(): 1.2e-21, 24.76% id in 735 aa, FT and to Bacteroides thetaiotaomicron penicillin-binding FT protein BT3453 SWALL:Q8A253 (EMBL:AE016940) (708 aa) fasta FT scores: E(): 3.8e-190, 79.83% id in 709 aa, and to FT Porphyromonas gingivalis penicillin-binding protein 2, FT putative PG0575 SWALL:AAQ65762 (EMBL:AE017174) (733 aa) FT fasta scores: E(): 2.3e-77, 38.55% id in 721 aa" FT /db_xref="GOA:Q5LIJ2" FT /db_xref="InterPro:IPR001460" FT /db_xref="InterPro:IPR005311" FT /db_xref="InterPro:IPR005543" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:Q5LIJ2" FT /protein_id="CAH06034.1" FT /translation="MTRYFFVILLMGLIGVAIVVKAGITMFAERQYWQDVADRFVKENV FT TVKPNRGNIISSDGKLMASSLPEYRIYMDFKAGGVKKDTMLMNHLDEICEGLHKIFPDK FT SASEFKTHLKKGRKQGSRNYLIYPKRISYIQYKEAKRLPVFNLNKYKGGFHELAYNQRK FT KPFGSLAARTLGDLYADTAQGAKNGIELAFDSILKGHDGITHRQKVMNKYLNIVDIPPV FT DGCDLLSTIDVGMQDICEKALTDKLKELNASVGVAVLMEVATGEVKAIVNMTKAGDGNY FT YEMRNNAISDMLEPGSTFKTASIMVALEDGKITPEDGIDTGNGIKMMHGRPMKDWNWYK FT GGYGYLTVTQILEVSSNIGTSSIIEKYYGSNPQKFVDGLKRMSIDQPLQLQIAGEGKPN FT IKGPKERYFAKTTLPWMSIGYETQVPPMNILTFYNAIANNGVMVRPKFVKAAIKNGEIV FT KEYPTEIINPKICSERTLKQIQEILYKVVHEGLAAPAGSKQFAVSGKTGTAQISQGAAG FT YKSGRVNYLVSFCGYFPSEAPKYSCIVSIQKPGLPASGGLMAGSVFSKIAERVYAKDLR FT LDIRNAIDTNTVVIPDVKAGEMIEARQVLEGLNIQTQAEFKAKKNKEVWGHAQAAPKAV FT ILQGKEQLRNFVPSVIGMGAKDAVYLLESKGLKVTLSGVGKVKSQSLPQGTTIKKGQTI FT SIHLN" FT misc_feature complement(289852..290028) FT /note="Pfam match to entry PF03793 PASTA, PASTA domain, FT score 38.0, E-value 1.8e-08" FT misc_feature complement(290242..291243) FT /note="Pfam match to entry PF00905 Transpeptidase, FT Penicillin binding protein transpeptidase domain, score FT 182.4, E-value 6.4e-52" FT misc_feature complement(291886..291948) FT /note="Signal peptide predicted for BF0259 by SignalP 2.0 FT HMM (Signal peptide probability 0.940) with cleavage site FT probability 0.544 between residues 21 and 22" FT CDS complement(291976..292317) FT /transl_table=11 FT /locus_tag="BF9343_0256" FT /old_locus_tag="BF0260" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3454 SWALL:AAO78560 (EMBL:AE016940) (118 aa) FT fasta scores: E(): 8.7e-34, 91.58% id in 107 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LIJ1" FT /protein_id="CAH06035.1" FT /translation="MEDKEAKKKKSNSLKSILGGDILATDFFRRQTKLLVLIMVLIIFY FT IHNRYASQQQQIEIDKLKKELIDIKYDALTRSSELMEKSRQSRIEDYISTKESDLQTST FT HPPYLISTK" FT misc_feature complement(292165..292218) FT /note="1 probable transmembrane helix predicted for BF0260 FT by TMHMM2.0 at aa 34-51" FT CDS complement(292346..293260) FT /transl_table=11 FT /gene="mraW" FT /locus_tag="BF9343_0257" FT /old_locus_tag="BF0261" FT /product="putative S-adenosyl-methyltransferase" FT /note="Similar to Enterococcus faecalis FT S-adenosyl-methyltransferase MraW or EF0989 FT SWALL:MRAW_ENTFA (SWALL:O07104) (318 aa) fasta scores: E(): FT 1.2e-42, 45.25% id in 316 aa, and to Bacteroides FT thetaiotaomicron S-adenosyl-methyltransferase MraW BT3455 FT SWALL:AAO78561 (EMBL:AE016940) (304 aa) fasta scores: E(): FT 1e-103, 91.44% id in 304 aa, and to Enterococcus faecalis FT S-adenosyl-methyltransferase MraW or EF0989 SWALL:AAO80795 FT (EMBL:U94707) (319 aa) fasta scores: E(): 3.4e-42, 44.93% FT id in 316 aa" FT /db_xref="GOA:Q5LIJ0" FT /db_xref="InterPro:IPR002903" FT /db_xref="InterPro:IPR023397" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIJ0" FT /protein_id="CAH06036.1" FT /translation="MKEEETTYHVPVLLKESVDAMNISPDGTYVDVTFGGGGHSREILS FT RLGDGGRLLGFDQDEDAERNIVNDPHFTFVRSNFRYLHNFLRYHDIGEVDAILADLGVS FT SHHFDDSERGFSFRFDGKLDMRMNKRAGITAADVVNTYEEERLADIFYLYGELKNSRKL FT ASVIVKARTGQKIETIGEFLEIIKPLFGREREKKELAKIFQALRIEVNQEMEALKEMLM FT AATEALKPGGRLVVITYHSLEDRMVKNIMKTGNVEGKTTQDFFGNLQTPFRLVNNKVIV FT PDEDEITRNPRSRSAKLRIAEKK" FT misc_feature complement(292349..293242) FT /note="Pfam match to entry PF01795 Methyltransf_5, MraW FT methylase family, score 415.7, E-value 3.6e-122" FT CDS complement(293257..293733) FT /transl_table=11 FT /gene="mraZ" FT /locus_tag="BF9343_0258" FT /old_locus_tag="BF0262" FT /product="putative cell division protein" FT /note="Similar to Escherichia coli protein MraZ or B0081 FT SWALL:MRAZ_ECOLI (SWALL:P22186) (152 aa) fasta scores: E(): FT 2.8e-08, 30.83% id in 120 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT3456 FT SWALL:AAO78562 (EMBL:AE016940) (156 aa) fasta scores: E(): FT 3e-46, 78.8% id in 151 aa, and to Clostridium tetani MraZ FT protein or CTC01636 SWALL:AAO36179 (EMBL:AE015941) (142 aa) FT fasta scores: E(): 1.4e-09, 33.85% id in 127 aa" FT /db_xref="InterPro:IPR003444" FT /db_xref="InterPro:IPR020603" FT /db_xref="UniProtKB/Swiss-Prot:Q5LII9" FT /protein_id="CAH06037.1" FT /translation="MIRFLGNIEAKADAKGRVFIPAQFRRQLQSGSEDKLIMRKDVFQD FT CLVLYPEEVWNEELDELRQRLNKWNANHQLIFRQFVSDVEIITMDGNGRILIPKRYLQI FT TGIQSDVRFIGVDNKIEIWAKERAEKLFMEPKAFGAALEEIMKEERRTTNNELK" FT CDS complement(293840..294340) FT /transl_table=11 FT /locus_tag="BF9343_0259" FT /old_locus_tag="BF0263" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3610 SWALL:AAO78715 (EMBL:AE016941) FT (156 aa) fasta scores: E(): 2.6e-09, 33.83% id in 133 aa, FT and to Bacteroides thetaiotaomicron putative DNA-binding FT protein BT0281 SWALL:AAO75388 (EMBL:AE016927) (213 aa) FT fasta scores: E(): 5.9e-05, 26.53% id in 147 aa" FT /db_xref="GOA:Q5LII8" FT /db_xref="InterPro:IPR000119" FT /db_xref="InterPro:IPR005902" FT /db_xref="InterPro:IPR010992" FT /db_xref="InterPro:IPR023630" FT /db_xref="UniProtKB/TrEMBL:Q5LII8" FT /protein_id="CAH06038.1" FT /translation="MSINYAVTKKVDKSKGIAKERYYATTRALQKKPVNSVQIANQLAE FT RSSLQNGDVLSALTQLSDIIAAHLKEGRTVSIDGLGNFYPSITSEAVDKPEECTANKVW FT VSRICFKAAPAFLNNVRKTDFVSLQLKYGRKSAKSQNGSDKETTDVIPHQQSISEDSSL FT SDE" FT CDS 294606..294785 FT /transl_table=11 FT /locus_tag="BF9343_0260" FT /old_locus_tag="BF0264" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LII7" FT /protein_id="CAH06039.1" FT /translation="MLIWQDLYSVSTLMQMFDVILSPDSPVKEKYRAGFDSLREVINQD FT SNPVLLKYRLKNAG" FT CDS complement(294884..295390) FT /transl_table=11 FT /gene="sigE" FT /locus_tag="BF9343_0261" FT /old_locus_tag="BF0265" FT /product="putative extracytoplasmic function alternative FT sigma factor" FT /note="Similar to Mycobacterium smegmatis extracytoplasmic FT function alternative sigma factor SigE SWALL:O05767 FT (EMBL:U87307) (204 aa) fasta scores: E(): 3.2e-08, 29.41% FT id in 153 aa, and to Bacteroides thetaiotaomicron RNA FT polymerase ECF-type sigma factor BT3457 SWALL:AAO78563 FT (EMBL:AE016940) (167 aa) fasta scores: E(): 6.4e-58, 89.82% FT id in 167 aa, and to Bacteroides thetaiotaomicron RNA FT polymerase ECF-type sigma factor BT1197 SWALL:AAO76304 FT (EMBL:AE016930) (167 aa) fasta scores: E(): 7.4e-58, 92.16% FT id in 166 aa" FT /db_xref="GOA:Q5LII6" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:Q5LII6" FT /protein_id="CAH06040.1" FT /translation="MKSLSFRKDLIGVQEELLRFAYKLTTDREEANDLLQETSLKALDN FT EDKYTPDTNFKGWMYTIMRNIFINNYRKVVRDQTFVDQTDNLYHLSLPQESGLDSTESR FT YDLKEMHRIVNSLPKEYKVPFSMHVSGFKYREIAEKLDLPLGTVKSRIFFTRQRLQEEL FT KDFRQ" FT misc_feature complement(294932..294997) FT /note="Predicted helix-turn-helix motif with score FT 1049.000, SD 2.76 at aa 132-153, sequence FT FKYREIAEKLDLPLGTVKSRIF" FT misc_feature complement(295160..295363) FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 53.0, E-value 5.4e-13" FT CDS 295588..295929 FT /transl_table=11 FT /locus_tag="BF9343_0262" FT /old_locus_tag="BF0266" FT /product="conserved hypothetical membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT1421 SWALL:AAO76528 (EMBL:AE016931) (104 aa) FT fasta scores: E(): 1.4e-11, 41.23% id in 97 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LII5" FT /protein_id="CAH06041.1" FT /translation="MGVKRNTRHRIWLAWMLLMTFMPLSVVKVFHNHSEETSITCTDAH FT SGKSHHTCETCPICQFMLSPFIETPSTLLTYTPLYVKWESGTFQDKKLSIAFYPHYLRG FT PPPVFYHIV" FT misc_feature 295588..295668 FT /note="Signal peptide predicted for BF0266 by SignalP 2.0 FT HMM (Signal peptide probability 0.846) with cleavage site FT probability 0.505 between residues 27 and 28" FT CDS 296004..298163 FT /transl_table=11 FT /locus_tag="BF9343_0263" FT /old_locus_tag="BF0267" FT /product="putative exported protein" FT /note="Similar to Leptospira interrogans hemin receptor FT LA3149 SWALL:Q8F1I6 (EMBL:AE011477) (777 aa) fasta scores: FT E(): 7.1e-15, 26.54% id in 682 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT1420 FT SWALL:AAO76527 (EMBL:AE016931) (718 aa) fasta scores: E(): FT 1.2e-207, 67.45% id in 719 aa, and to Caulobacter FT crescentus TonB-dependent receptor CC0214 SWALL:Q9ABL3 FT (EMBL:AE005695) (687 aa) fasta scores: E(): 1e-13, 24.73% FT id in 744 aa" FT /db_xref="GOA:Q5LII4" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:Q5LII4" FT /protein_id="CAH06042.1" FT /translation="MRIGFFSGMLGGLCLISTLHAQEPDSLKAVSLSEVVVTESYQHLK FT NKNSTWHMEVVGKEFLREHFTGNLIQTLGTLPGVHSMDIGSGFSKPMIRGMGFNRISVV FT ENGIKQEGQQWGADHGLELDAFNAGQVSIRKGPASLLYGSDAMGGAIELVPLPLPAGNR FT LFGEASLLGKSVNGTLGGSLMLGIKKDAWYTWARYSEQHFGDYRIPTDTIVYLTQRMPV FT YHRRLKNTAGFERDVSWAAGFRKERYVSSYWVSNVFQKTGFFPGAHGIPDVSRLQDDGD FT SRNIELPYSQVNHLKVSTRQSLLYDKWALTWDIGFQKNHREEWSRFHTHYDAQPVPDKD FT PDKELAFTLNTYSSAVKLKLFASAVWQHTAGWDVQYQRNTIAGYSFLLPAYRRFTTGAF FT WMTTYRPGPTLSFSGGLRYDYGKIDASAYTDPYLAIYLREQGYGDEFIRKYEWRSYPVR FT RHFGDYSGSLGLVWSPSGGHLLQVNVGHSFRLPGANELASNGVHHGTFRHEQGDAALAS FT ERGWQFDVSYTYENGPLSVSLSPFVSWFSNYIFLRPTGEWSILPHAGQIYRYTGAEALF FT AGGEAAVGIDFLRHFNYRVSGEYVYTYNCDEHIPLSFSPPASLRNTLTWRYKEFSIYGE FT VQHIAAQHRVARNEDPTPGAQLLNAGVSANLRIGDIWVEVTLSARNLSGAKYFNHLSFY FT RKVEIPEPGRNFQILIKVPFKSLLK" FT misc_feature 296004..296066 FT /note="Signal peptide predicted for BF0267 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 1.000 between residues 21 and 22" FT misc_feature 296142..298145 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 87.8, E-value 1.9e-23" FT CDS 298160..298663 FT /transl_table=11 FT /locus_tag="BF9343_0264" FT /old_locus_tag="BF0268" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT1419 SWALL:AAO76526 (EMBL:AE016931) (164 aa) FT fasta scores: E(): 2e-33, 59.28% id in 167 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LII3" FT /protein_id="CAH06043.1" FT /translation="MKTKNYLSIISILFFSFLFVSCSKEDEGDTIKPVIDLLEPEEGAI FT LRIGSSHGVHFEMNLHDNEAIASYKINIHNNFDGHSHTRASEAGITKPFTFERTYTDKA FT GQKDAYVHNHDIKIPADATPGNYHLMVYCLDQSGNETYVVRNIVLSVEGGEEGEHHHDE FT HHHD" FT misc_feature 298160..298231 FT /note="Signal peptide predicted for BF0268 by SignalP 2.0 FT HMM (Signal peptide probability 0.985) with cleavage site FT probability 0.571 between residues 24 and 25" FT CDS 298929..299747 FT /transl_table=11 FT /locus_tag="BF9343_0265" FT /old_locus_tag="BF0269" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3458 SWALL:AAO78564 (EMBL:AE016940) FT (272 aa) fasta scores: E(): 1.1e-98, 87.13% id in 272 aa, FT and to Shewanella oneidensis acyltransferase family protein FT SO1238 SWALL:Q8EHI3 (EMBL:AE015568) (619 aa) fasta scores: FT E(): 1.2e-13, 25% id in 272 aa, and to Vibrio cholerae FT conserved hypothetical protein/hemolysin, putative VCA0646 FT SWALL:Q9KLU5 (EMBL:AE004394) (605 aa) fasta scores: E(): FT 1.4e-11, 28.72% id in 275 aa" FT /db_xref="GOA:Q5LII2" FT /db_xref="InterPro:IPR002123" FT /db_xref="UniProtKB/TrEMBL:Q5LII2" FT /protein_id="CAH06044.1" FT /translation="MADDSLFLIDIDKILQTKAPKHYKYIPKFVVSYLKRIVHQEELNV FT FLRDSKDKVGVDFLGACLEFLDAKLEVKGLENIPKDGLYTFVSNHPLGGQDGVSLGYIL FT GRHFDGKVKYLVNDLLMNLHGLAPLCIPINKTGKQAKDFPKMVEAGFKSDDQLIMFPAG FT LCSRRQNGVIRDLDWKKTFIVKSVQFQRGVIPVHFEGRNSDFFYNLANLCKALGIKFNI FT AMLYLADEMLKNRHKTFTVTFGKPIPWQTFDKSKTPAEWAQYVKDIVYKL" FT CDS 299778..300791 FT /transl_table=11 FT /locus_tag="BF9343_0266" FT /old_locus_tag="BF0270" FT /product="putative hemolysin A" FT /note="Similar to Prevotella melaninogenica hemolysin A FT PhyA SWALL:Q51888 (EMBL:U27587) (332 aa) fasta scores: E(): FT 2e-91, 69.56% id in 322 aa, and to Bacteroides FT thetaiotaomicron hemolysin A BT3459 SWALL:AAO78565 FT (EMBL:AE016940) (337 aa) fasta scores: E(): 1.2e-112, FT 82.38% id in 335 aa, and to Shewanella oneidensis FT acyltransferase family protein SO1238 SWALL:Q8EHI3 FT (EMBL:AE015568) (619 aa) fasta scores: E(): 9.6e-15, 31.62% FT id in 313 aa" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q5LII1" FT /protein_id="CAH06045.1" FT /translation="MEEVIEPVSKELIIAELTEDKRLRMTNKSNNQIYIITYQDSPNIM FT REIGRLREIAFRAAGGGTGLSMDIDEYDTMENPYKQLIVWNPEAEEILGGYRYILGTDV FT RFDEHGAPVLATSHMFNFSDRFVKEFLPTTIELGRSFVTLEYQSTRAGSKGLFALDNLW FT DGLGALTVVMPNVKYFFGKVTMYPSYHRQGRDMILYFLKKHFGDKDGLITPMKPLEMET FT DEAELARIFCKDSFKDDYRILNGEIRKLGFNIPPLVNAYMSLSPTMRMFGTAINYGFGD FT VEETGILIAVDEILEEKRMRHIESFVKNDPEDCQITSGVNKVFTPKVVTPQEDCSR" FT CDS complement(300763..302091) FT /transl_table=11 FT /gene="dgt" FT /locus_tag="BF9343_0267" FT /old_locus_tag="BF0271" FT /product="putative deoxyguanosinetriphosphate FT triphosphohydrolase" FT /EC_number="3.1.5.1" FT /note="Similar to Salmonella typhimurium FT deoxyguanosinetriphosphate triphosphohydrolase Dgt or FT STM0208 SWALL:DGTP_SALTY (SWALL:P40733) (504 aa) fasta FT scores: E(): 2.3e-11, 30.45% id in 509 aa, and to FT Bacteroides thetaiotaomicron dGTP triphosphohydrolase FT BT3460 SWALL:AAO78566 (EMBL:AE016940) (450 aa) fasta FT scores: E(): 6.6e-150, 84.22% id in 450 aa, and to FT Pseudomonas aeruginosa deoxyguanosinetriphosphate FT triphosphohydrolase-like protein Dgt2 or PA3043 FT SWALL:DGT2_PSEAE (SWALL:Q9HZG5) (443 aa) fasta scores: E(): FT 2.9e-53, 37.36% id in 455 aa" FT /db_xref="GOA:Q5LII0" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006261" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR023279" FT /db_xref="InterPro:IPR023293" FT /db_xref="UniProtKB/TrEMBL:Q5LII0" FT /protein_id="CAH06046.1" FT /translation="MMDWKRLISAKRFGMEEFHEERQENRSEFQRDYDRLVFSAPFRRL FT QNKTQVFPLPGSIFVHNRLTHSLEVSCVGRSLGNDVSKAILARQPELQDSFLPEIGSIV FT SAACLAHDLGNPPFGHSGEKAISTFFSEGKGAQLQEKLSPMEWNDLTHFEGNANAFRLL FT THQFEGRRKGGFVLTYSTLASIVKYPFSSSLAGNKSKFGFFTTEEEGFRRIATELGLIQ FT LSDRPLKYARHPLVYLVEAADDICYQMMDIEDAHKLKILTTEETKELLLAYFADERQTH FT IRKTFDIVKDTNEQIAYLRSSVIGLLIKECTQVFLNNETEILSGTFEGALIKHISERPG FT KAYKHCSEVSFSKIYRSRDVLDIELAGFRVINTLLELMIDAVTSPEKAYSQLLINRVSG FT QYNIKAPALYERVQAVLDYISGMTDVFALDLYRKINGNSLPAV" FT misc_feature complement(301714..301905) FT /note="Pfam match to entry PF01966 HD, HD domain, score FT 19.9, E-value 6.5e-05" FT CDS 302193..302627 FT /transl_table=11 FT /gene="dut" FT /locus_tag="BF9343_0268" FT /old_locus_tag="BF0272" FT /product="putative deoxyuridine 5'-triphosphate FT nucleotidohydrolase" FT /EC_number="3.6.1.23" FT /note="Similar to Zymomonas mobilis deoxyuridine FT 5'-triphosphate nucleotidohydrolase Dut SWALL:DUT_ZYMMO FT (SWALL:Q9X3X5) (146 aa) fasta scores: E(): 7.2e-24, 54.96% FT id in 131 aa, and to Bacteroides thetaiotaomicron FT deoxyuridine 5'-triphosphate nucleotidohydrolase BT3461 FT SWALL:AAO78567 (EMBL:AE016940) (144 aa) fasta scores: E(): FT 3.3e-52, 91.66% id in 144 aa, and to Fusobacterium FT nucleatum deoxyuridine 5'-triphosphate nucleotidohydrolase FT Dut or FN1028 SWALL:DUT_FUSNN (SWALL:Q8RER7) (146 aa) fasta FT scores: E(): 1.7e-29, 58.04% id in 143 aa" FT /db_xref="GOA:Q5LIH9" FT /db_xref="InterPro:IPR008180" FT /db_xref="InterPro:IPR008181" FT /db_xref="UniProtKB/Swiss-Prot:Q5LIH9" FT /protein_id="CAH06047.1" FT /translation="MNIQVINKSKHPLPAYATELSAGMDIRANISEPISLAPMQRCLVP FT TGLFIALPQGFEAQIRPRSGLALKKGITVLNSPGTIDADYRGEICIILVNLSAETFVIE FT DGERIAQMVIARHEQAVWKEVEVLDETERGAGGFGHTGRG" FT misc_feature 302217..302618 FT /note="Pfam match to entry PF00692 dUTPase, dUTPase, score FT 119.0, E-value 7.7e-33" FT CDS 302658..304415 FT /transl_table=11 FT /locus_tag="BF9343_0269" FT /old_locus_tag="BF0273" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron TPR domain FT protein BT3462 SWALL:Q8A244 (EMBL:AE016940) (584 aa) fasta FT scores: E(): 1.4e-163, 72.94% id in 584 aa, and to FT Porphyromonas gingivalis TPR domain protein PG0954 FT SWALL:AAQ66084 (EMBL:AE017175) (579 aa) fasta scores: E(): FT 2.4e-51, 30.39% id in 556 aa" FT /db_xref="GOA:Q5LIH8" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:Q5LIH8" FT /protein_id="CAH06048.1" FT /translation="MKINKLLFGMLLLLLASCGSSRKVEKQSEQVAVQEINLTPEQQRK FT YDYFFLEASRLKVKKEYTAAFDLLQHCLAINPTGSAALYEIAQYYLFLKQAPQGQEALE FT KAVAYAPDNYWYSQALAGLYQQQDQKEKAIGILEKMATRFPAKQDPLFNLLDLYNQKED FT YGKVISTLNRIEEKTGKNEQITMEKFRIYLQMKDDKKAFEEIESLVNEYPMDYRYQVIL FT GDVYMQNGKKQEAYDTYKKVLAAEPDNPMALFSLASYYEQTGQKELFEQQMDTLLLNRK FT VPSDTKVNVMRQFIVQSEQEGKDSTQVIGLFDRMMQMDMDDVQIPMLYAQYLLSKGMEA FT QSIPVLEQVVQIDPTNKAARMTLLGSAIRKNDYEQVIKICEPGIEATPDALEFYFYLVI FT AYNQAEHWDDVLEVSRKALEHVTPESDKQMVSDFYTIIGDVYHTKKLMKEAYAAYDSAL FT VYNPSNIGALNNYAYYLSVERRDLDKAEEMSYKTVKAAPNNATYLDTYAWILFEKGNYA FT EARIYIDDAIKNTKPEEESSVVFEHCGDIYFMTGDVEGALKYWKKALELGTESKTLKQK FT IEKKKYIAE" FT misc_feature 302658..302726 FT /note="Signal peptide predicted for BF0273 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.686 between residues 33 and 34" FT misc_feature 302895..302996 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 12.6, E-value 0.17" FT misc_feature 303303..303404 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 23.9, E-value 0.00033" FT misc_feature 303948..304049 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 20.4, E-value 0.0035" FT misc_feature 304266..304367 FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 13.1, E-value 0.15" FT CDS 304412..304999 FT /transl_table=11 FT /locus_tag="BF9343_0270" FT /old_locus_tag="BF0274" FT /product="putative lipoprotein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3463 SWALL:AAO78569 (EMBL:AE016940) (193 aa) FT fasta scores: E(): 9.7e-35, 59.14% id in 186 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LIH7" FT /protein_id="CAH06049.1" FT /translation="MKGSKLKQTVIKQSYLLPLLLMVVLLAGCKTSKVVKTTPVEPAYL FT SSKLQLTVPNKNGSMTVSGSMKMKSGERIQLSVLMPVFRSEVMRMEVTPDEVLLIDRMN FT KRYVRATRDELKGILPENADFDRLEKLLFKASLPGEKKELTGRELGIPSLEKAKVRLSD FT FSTAEFELIPTEVSSRYTQVALEDLLKMLMKL" FT misc_feature 304412..304519 FT /note="Signal peptide predicted for BF0274 by SignalP 2.0 FT HMM (Signal peptide probability 0.921) with cleavage site FT probability 0.429 between residues 36 and 37" FT misc_feature 304466..304498 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 304996..306309 FT /transl_table=11 FT /locus_tag="BF9343_0271" FT /old_locus_tag="BF0275" FT /product="putative exported peptidase" FT /note="Similar to Bacteroides thetaiotaomicron putative FT peptidase BT3464 SWALL:AAO78570 (EMBL:AE016940) (435 aa) FT fasta scores: E(): 1.4e-99, 80.77% id in 437 aa, and to FT Chlorobium tepidum zinc metalloendopeptidase CT0558 FT SWALL:Q8KEX4 (EMBL:AE012830) (303 aa) fasta scores: E(): FT 4e-09, 28.57% id in 301 aa, and to Pseudomonas syringae FT peptidase, M23/M37 family PSPTO5328 SWALL:AAO58754 FT (EMBL:AE016875) (440 aa) fasta scores: E(): 8.8e-09, 23.04% FT id in 447 aa" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR016047" FT /db_xref="UniProtKB/TrEMBL:Q5LIH6" FT /protein_id="CAH06050.1" FT /translation="MNRFLLILISCLCLTTTISAQSNKLIKELESKRGALQQQIAETES FT LLKNTKKDVGSQLNGLAVLTGQIEERKRYIIAINNDVEAVGREIAGLERQLRGLQRDLK FT DKKKKYESSVQYLYKNKSVEEKLMFIFSAKSLGQTYRRLRYVREYATYQRLQGEEILKK FT QEQVNRKKKELQQVKVAKENLLREREGEKAKLEAQEKEKREIVAGLQKKQKGLQSEISK FT KRREANQLNAKIDKLIAEEIERARKRAEEEARREEAARRKAAAKESKSSSTGGGTVPAK FT KKAEPLERFTMSKADRELSGNFVSNRGKLPMPITGPYIITSHYGQYAVEGLRNVKLDNK FT GIDIQGKPGAQARAIFDGKVAAVFQLNGLFNVLIRHGDYISVYCNLSSASVKSGDTVTT FT RQAIGPIFSDGSDNGRTVLHFQLRRERDKLNPEPWLNR" FT misc_feature 304996..305055 FT /note="Signal peptide predicted for BF0275 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.813 between residues 20 and 21" FT misc_feature 306052..306297 FT /note="Pfam match to entry PF01551 Peptidase_M37, Peptidase FT family M23/M37, score 21.6, E-value 9.7e-06" FT CDS 306379..310368 FT /transl_table=11 FT /locus_tag="BF9343_0272" FT /old_locus_tag="BF0276" FT /product="putative two-component system sensor histidine FT kinase/response regulator fusion protein" FT /note="Similar to Bacteroides thetaiotaomicron FT two-component system sensor histidine kinase/response FT regulator, hybrid BT3465 SWALL:AAO78571 (EMBL:AE016940) FT (1345 aa) fasta scores: E(): 0, 68.97% id in 1331 aa, and FT to Bacteroides thetaiotaomicron two-component system sensor FT histidine kinase/response regulator, hybrid BT2923 FT SWALL:AAO78029 (EMBL:AE016938) (1338 aa) fasta scores: E(): FT 7.8e-173, 37.77% id in 1337 aa, and to Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase/response regulator, hybrid BT2897 SWALL:AAO78003 FT (EMBL:AE016938) (1326 aa) fasta scores: E(): 5.5e-164, FT 37.48% id in 1358 aa" FT /db_xref="GOA:Q5LIH5" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011042" FT /db_xref="InterPro:IPR011110" FT /db_xref="InterPro:IPR011123" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:Q5LIH5" FT /protein_id="CAH06051.1" FT /translation="MRIITLLITLFAFGITPLQAFSYFSFKKYQVEDGLSHNTVWCAMQ FT DSYGFIWLGTSDGLNCYNGRGNKVYRNVLNDKFSLENNFVQALFEEENHNIWVGTNWGL FT YIYDREYDRFTYFDKKTRYGVFISSEIKKIIKSESGLIWIATLGQGLFVYNPQTDVLTQ FT NSLQTSFVWDVCENNSGHIYASSLQEGLLCFDENGKFLQSYPLLSAGNNPDNYRINCLL FT DIRSDIWFGAGSNLLYCLNERTGNLDCYNASHLNFGAIRCLLNYSETELLVGTDNGLYL FT FDLHDKNFSRIDNPSDPRSLSDQSINAMMRDAEGGIWVLTNLGGVNYLAKPTKRFDYYP FT PVYRDGGVAAGKVVGPFCENAAGDIWVGTRDGLCFFDVSTHQLTAYPIGGGVDKKYDIR FT SLLLDGERLWIGTYAEGLKVLDLRTGHVKSYNHLQDTPNTICSDDVLAVYKDRSGDIFV FT GTSWGLCRYNPREDNFSTITTVGSMVSVVDILEDMYDNLWIGTSNSGVFRFNTRNGHWK FT HFQHERNDSTTITNNSVITLFEDLKGTMWVGTNGGGLCSFDPKTETFIDFDPDNTILPN FT RVIYSIEQDKTGDFWISSNAGLITINPITKQHFRQFTVNDGLQGNQFTAQSSLKTASGK FT LYFGGISGFNSFVPDQFMDNQYIPSVYITEIRLPYTTDERLVQDILHLKGPLYRAETIT FT LPYEHNTFSVSFVALSYEDPLKNRYSYRLKGVDKEWVINSEQNTASYTNLPPGKYEFEV FT RGSNNDHKWNDQTTSLLIVVTPPWWLTIWAYCVYTLLLLGLAYYAGWHWNRHVKKKYKR FT RMEEYQTTKEKEVYKSKISFFINLVHEIRTPLSLIRLPLEKLLEDKREGRDAKYLSVID FT RNVNYLLGITNQLLDFQKMENGGVQLSLKKCDINQLVSDVHSQFTSPAELKGISVMLDL FT PEGEIFASVDREKVCKIIVNLIGNAVKYAQSRIDIKLVSSDEGFRVSVSDDGPGIPDVE FT KRKVFEAFYQVKDGKSGAVGTGIGLAFSKSLAEAHHGTLSLEDSVYGGSSFVLTLPWGE FT EAVSEEPEVVIPDGREAADEEQGTELSGSKFTILLVEDNVDLLNLTRESLSTWFKVLKA FT QNGRQALEVLANETVDVIVSDVMMPEMNGLELTAKVKSDIEYSHIPVILLTAKTTLEAK FT VEGFECGADVYIEKPFSIRQLRKQIENLLKLRQAFHKMMAELSGGNGAAPISPVEYSVS FT QKDCELMAKVRAAVEAQLSDENFSVDTLAESLNMSRSNFYRKIKALAGMPPNDYLKTIR FT LNKAAELLKSGVRITEVCEKIGFSSSSYFAKCFKIQFGVLPKDYH" FT misc_feature 306379..306438 FT /note="Signal peptide predicted for BF0276 by SignalP 2.0 FT HMM (Signal peptide probability 0.990) with cleavage site FT probability 0.549 between residues 20 and 21" FT misc_feature 308710..308778 FT /note="1 probable transmembrane helix predicted for BF0276 FT by TMHMM2.0 at aa 778-800" FT misc_feature 308860..309057 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 60.3, E-value 3.5e-15" FT misc_feature 309193..309519 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 120.7, FT E-value 2.4e-33" FT misc_feature 309613..309975 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 121.9, E-value 1e-33" FT misc_feature 309622..309687 FT /note="Predicted helix-turn-helix motif with score FT 1055.000, SD 3.43 at aa 1082-1103, sequence FT LLVEDNVDLLNLTRESLSTWFK" FT misc_feature 309622..310185 FT /note="Predicted helix-turn-helix motif with score FT 1246.000, SD 3.43 at aa 1082-1269, sequence FT LLVEDNVDLLNLTRESLSTWFKVLKAQNGRQALEVLANETVDVIVSDVMMPEMNGLE FT LTAKVKSDIEYSHIPVILLTAKTTLEAKVEGFECGADVYIEKPFSIRQLRKQIENLL FT KLRQAFHKMMAELSGGNGAAPISPVEYSVSQKDCELMAKVRAAVEAQLSDENFSVDT FT LAESLNMSRSNFYRKIK" FT misc_feature 310081..310221 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 33.5, E-value 4.1e-07" FT misc_feature 310120..310185 FT /note="Predicted helix-turn-helix motif with score FT 1246.000, SD 3.43 at aa 1248-1269, sequence FT FSVDTLAESLNMSRSNFYRKIK" FT misc_feature 310228..310353 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature 310240..310365 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 28.9, E-value 1e-05" FT CDS complement(310550..311626) FT /transl_table=11 FT /locus_tag="BF9343_0273" FT /old_locus_tag="BF0277" FT /product="putative exported protein" FT /note="Similar to Streptomyces chartreusis FT alpha-L-arabinofuranosidase II precursor SWALL:ABF2_STRCX FT (SWALL:P82594) (328 aa) fasta scores: E(): 2.7e-06, 33.33% FT id in 324 aa, and to Bacteroides thetaiotaomicron putative FT glycosylhydrolase BT3515 SWALL:AAO78621 (EMBL:AE016941) FT (389 aa) fasta scores: E(): 2e-115, 73.48% id in 347 aa, FT and to Bacteroides thetaiotaomicron putative FT glycosylhydrolase BT3467 SWALL:AAO78573 (EMBL:AE016940) FT (365 aa) fasta scores: E(): 9.9e-95, 60.57% id in 350 aa" FT /db_xref="GOA:Q5LIH4" FT /db_xref="InterPro:IPR006710" FT /db_xref="InterPro:IPR016828" FT /db_xref="InterPro:IPR023296" FT /db_xref="UniProtKB/TrEMBL:Q5LIH4" FT /protein_id="CAH06052.1" FT /translation="MKLKHIPLLLLVLTCCPACQNKKASATKEIPSEATYTNPLLAVGA FT EPWAVFHEGKYYYTQGAENKIILWETNDITDLEHAARKEVWIPKEISNSYHLWGPEIHR FT IDGKWYVYFAADDGNMDNHHIYVIENSSPNPLEGEFVMKGRIKTDKDDNWAIHASTFEH FT QGQRYLIWCGWPKRRIETETQCIYIARMENPWTLSSDRVMIAEPEYEWERQWISPDGSK FT TAYPIHVNESPQFFESKNKDKVLIYYCASGSWTPYYCIGLLTADAGSDLTNAASWKKQD FT TPVFEQQPEDSVFGPGSPSFVPTPDEKEWYMLYHARKIPNDAPGATDSRSPRLQKISWD FT ANGMPVLGKPCKEGTQIK" FT misc_feature complement(311564..311626) FT /note="Signal peptide predicted for BF0277 by SignalP 2.0 FT HMM (Signal peptide probability 0.991) with cleavage site FT probability 0.537 between residues 21 and 22" FT CDS complement(311708..314206) FT /transl_table=11 FT /locus_tag="BF9343_0274" FT /old_locus_tag="BF0278" FT /product="putative beta-glucosidase" FT /note="Similar to Agrobacterium tumefaciens FT beta-glucosidase cbg-1 with an N-terminal extension FT SWALL:BGLS_AGRTU (SWALL:P27034) (818 aa) fasta scores: E(): FT 1.8e-62, 37.88% id in 821 aa, and to Bacteroides FT thetaiotaomicron beta-glucosidase BT3300 SWALL:AAO78406 FT (EMBL:AE016940) (825 aa) fasta scores: E(): 0, 61.12% id in FT 818 aa, and to Rhizobium etli hypothetical protein BglS FT SWALL:Q8KKX3 (EMBL:U80928) (814 aa) fasta scores: E(): FT 1.1e-91, 36.66% id in 821 aa" FT /db_xref="GOA:Q5LIH3" FT /db_xref="InterPro:IPR001764" FT /db_xref="InterPro:IPR002772" FT /db_xref="InterPro:IPR011658" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LIH3" FT /protein_id="CAH06053.1" FT /translation="MKATTSLATSCRRLLLWGVLTLQCLFSTAQKRFTADVEQQAEKIL FT SQMTLDEKLSYIGGINWMYTRPLERFGIPRLKMSDGPQGLGTHGPSTAYPCALMLAATW FT NEQLATEYGSALGKDCRARGVHVLLGPAVNIYRAPMCGRNFEYMGEDPYLTSRMATGYI FT KGVQGQGVMATIKHFIANNSDYDRDHISSDIDERTLNEIYFPSFRAAVQEAEVGAVMSS FT YNLLNGIYTTEHPWLLKDVLRQQWGFKGILMSDWGSTHHCIPAVKGGLDLEMPAGSKMQ FT PEELKYYLRTGDITIETIDEKVRHILQTLLAFGFRETQQPDTHIPLKNPQCAQTALNVA FT SEGLVLLKNTNQILPIRSGKVKTIAVVGKNAQGYVCGGGSGEVHPFQYVSVLDGIRKEA FT AERDIRVEYLDVYDYLPTIIFTDTERKQKGFRAQYFDNMNLEGTPKVEQTETKINYSWS FT GGTGLKEMPKEQFSVRWNGTICPQETDEYLFTLGGDDGYRLYIDGKLIADEWHEGAFRN FT STYRCMLEAGKKYDLKIEYFQKGGGAAVNFIWKQKNASNNLFVEALNRNDLVVACIGFN FT SDTEGEGRDRTFELPEDEAQLLQNTLQSKRPVVGIVNAGGNVEMQSWEPSLKGLLWAWY FT GGQEAGTAIARTLFGELNPSGKLPITFEKRWEDNPTFHSYYDPDGDKHVEYAEGIFVGY FT RGYDKLKREVQYPFGYGLSYTRFKLSAPTVGTPKTDGSVTVTCKLTNTGRTAGAEVVQL FT YVSNKDTTVEHPEKELKGFRKVYLEPGETKSIEITVPAEAFSHYDTGSRRFVIDRGSHD FT ILLGFSSRDIKAKMSVGISR" FT misc_feature complement(312059..313177) FT /note="Pfam match to entry PF01915 Glyco_hydro_3_C, FT Glycosyl hydrolase family 3 C terminal domain, score 119.9, FT E-value 4.1e-33" FT misc_feature complement(313331..314098) FT /note="Pfam match to entry PF00933 Glyco_hydro_3, Glycosyl FT hydrolase family 3 N terminal domain, score 356.4, E-value FT 2.6e-104" FT misc_feature complement(313433..313486) FT /note="PS00775 Glycosyl hydrolases family 3 active site." FT CDS complement(314349..315515) FT /transl_table=11 FT /locus_tag="BF9343_0275" FT /old_locus_tag="BF0279" FT /product="putative glycosylhydrolase" FT /note="Similar to Bacillus circulans alpha-1,6-mannanase FT precursor AmaN6 SWALL:Q9Z4P9 (EMBL:AB024331) (589 aa) fasta FT scores: E(): 1.6e-15, 27.24% id in 345 aa, and to FT Bacteroides thetaiotaomicron putative hydrolase BT2631 FT SWALL:AAO77738 (EMBL:AE016936) (385 aa) fasta scores: E(): FT 2.8e-91, 57.94% id in 390 aa, and to Bacteroides FT thetaiotaomicron putative hydrolase BT3782 SWALL:AAO78887 FT (EMBL:AE016942) (387 aa) fasta scores: E(): 2.6e-89, 58.02% FT id in 374 aa" FT /db_xref="GOA:Q5LIH2" FT /db_xref="InterPro:IPR005198" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012341" FT /db_xref="InterPro:IPR014512" FT /db_xref="UniProtKB/TrEMBL:Q5LIH2" FT /protein_id="CAH06054.1" FT /translation="MRKSFIALTFLLVPACLSAQLGGKIYLQRADSLLQRVLSLYEVKK FT YGLLMETYPRNPKQQITYTANTGSEVTQQEVSFLWPYSAMVSGCVSLYKTSGNKKYKKL FT MDKQIKPGLDLYWDTTRQPECYQSYPAFAGQNDRYYDDNDWVAIDFCDYYAVTKNKEYL FT KKAIALHDYIYSGWSDELGGGIYWCEQKKESKNTCSNAPATVLCMKLYKLTKDKKYLDQ FT AMATYQWTRDNLRDPSDFVYWDNKNLQGKIGYAKYTYNSGQMIQAGVLLYQATGDEQYL FT KDAQQTAKGSYEHFLKPQPTVKGEMKFFPSSPWFNVILFRGLKALYKVDKNDTYVKAMI FT DNADYAWQYTRDENGLLNNDWSGNRKDKFKSLLENSCMIELYSEISEL" FT misc_feature complement(314385..315362) FT /note="Pfam match to entry PF03663 Glyco_hydro_76, Glycosyl FT hydrolase family 76, score -117.1, E-value 1.4e-07" FT misc_feature complement(315459..315515) FT /note="Signal peptide predicted for BF0279 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.367 between residues 19 and 20" FT CDS complement(315731..317515) FT /transl_table=11 FT /locus_tag="BF9343_0276" FT /old_locus_tag="BF0280" FT /product="putative exported glycosylhydrolase" FT /note="Similar to Escherichia coli beta-glucuronidase UidA FT or GusA or GurA or B1617 SWALL:BGLR_ECOLI (SWALL:P05804) FT (603 aa) fasta scores: E(): 1.6e-16, 24.44% id in 589 aa, FT and to Bacteroides thetaiotaomicron beta-glucuronidase FT BT3292 SWALL:AAO78398 (EMBL:AE016939) (591 aa) fasta FT scores: E(): 3.3e-122, 56.54% id in 596 aa, and to FT Streptomyces coelicolor putative hydrolase SCO7506 or FT SCBAC17A6.39 SWALL:Q93J91 (EMBL:AL939131) (606 aa) fasta FT scores: E(): 1.2e-73, 43.8% id in 589 aa" FT /db_xref="GOA:Q5LIH1" FT /db_xref="InterPro:IPR006102" FT /db_xref="InterPro:IPR006103" FT /db_xref="InterPro:IPR006104" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013812" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LIH1" FT /protein_id="CAH06055.1" FT /translation="MKKLLAAAMLFMLNSWSCFSADTPRAEYPRPQFEREQWLNLNGTW FT TFDFDFGKSGKDRRLQSAEKFDKNITVPFCPESKLSGVGYTDFIEQMWYQRNITIPSDW FT NGKKIFLNFGAVDYCAEIYVDGKFVQRHFGGSSSFAVDLTRYVTPGKTHNLVVFVQDDL FT RSGLQTGGKQCGNYYSGGCSYTRTTGIWQTVWMEAVSTDGLKSVFVRPDIDQKQLIIEP FT EFYNESANTLEIILKDGNKTVAKKSVNCANSSVVVLPVKNMKLWSPEDPFLYDLVYQVK FT DAKGNVLDEVKSYAGMRKVHTANGRFYLNNQPYFQRLVLDQGFYPEGIWTAPSDEDLKN FT DIVLGKEAGFNGARLHQKVFEERYYYWADKLGYITWGESASWMLDVNKELAARNFLGEW FT SEVVVRDRNHPSLVTWTPFNETWGGGPDAYVRLVRDVYNITKAIDPTRPVNDASGDNHV FT ITDIWSVHNYEQDRAKLTEQLKMEEGKEPYRNARDKDFLAVYEGQPYMVDEFGGIPWMA FT EKDRKNSWGYGGMPENAEAFYKRLEGQIDAFIDSPHVTGFCYTQLTDVEQEKNGIYYYD FT RTPKLDMKRIKAIFEKIK" FT misc_feature complement(315734..316618) FT /note="Pfam match to entry PF02836 Glyco_hydro_2_C, FT Glycosyl hydrolases family 2, TIM barrel domain, score FT -85.8, E-value 1.9e-06" FT misc_feature complement(316622..316669) FT /note="PS00038 Myc-type, 'helix-loop-helix' dimerization FT domain signature." FT misc_feature complement(316622..316906) FT /note="Pfam match to entry PF00703 Glyco_hydro_2, Glycosyl FT hydrolases family 2, immunoglobulin-like beta-sandwich FT domain, score 38.2, E-value 1.6e-08" FT misc_feature complement(316916..317461) FT /note="Pfam match to entry PF02837 Glyco_hydro_2_N, FT Glycosyl hydrolases family 2, sugar binding domain, score FT -36.8, E-value 5e-05" FT misc_feature complement(317456..317515) FT /note="Signal peptide predicted for BF0280 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.987 between residues 20 and 21" FT CDS complement(317632..319668) FT /transl_table=11 FT /locus_tag="BF9343_0277" FT /old_locus_tag="BF0281" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3531 SWALL:Q8A1X7 (EMBL:AE016941) FT (687 aa) fasta scores: E(): 8.6e-59, 35.53% id in 712 aa, FT and to Arabidopsis thaliana hypothetical protein t24h18_120 FT SWALL:Q9LXU4 (EMBL:AL353013) (861 aa) fasta scores: E(): FT 1.2e-10, 22.77% id in 606 aa, and to Rhizobium meliloti FT hypothetical protein rb1544 or smb20631 SWALL:Q92TH5 FT (EMBL:AL603647) (640 aa) fasta scores: E(): 1.5e-10, 24.87% FT id in 575 aa" FT /db_xref="GOA:Q5LIH0" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012341" FT /db_xref="InterPro:IPR012878" FT /db_xref="UniProtKB/TrEMBL:Q5LIH0" FT /protein_id="CAH06056.1" FT /translation="MKKKNTFTYLLIGLGLCFSSLGSGLRADTPENYTNNRYPLVRKPL FT MELPLGSIKAKGWLQEMLVRQKNGATGQMDKLYPLVMGERNGWLGGDGDQWERGPYWID FT GLLPLAYILDDAQLKAKVQPWIEWALKSQREDGFFGPAKDYPGEAGIQRDNSHDWWPRM FT VMLKILQQYYSATNDQRVIRFMTDYFRYQLKTLPEKPLGNWTFWAEFRACDNLQAVYWL FT YNITGDSFLLDLGKLIHQQSFSFVDMVNRGDLKRINTIHCVNLAQGIKEPVIYYQQEPD FT KMYLDAVKRAFRDIRQFHGQPQGMYGGDEALHGNNPTQGSELCSAVELMYSLEKMVEIT FT GDIDFADHLERIAFNALPTQISDDFMTKQYFQQANQVMVSRHRRNFDQDHGGTDNCFGL FT LTGYPCCASNMHQGWPKFTQSLWYATPDGGLAVTAYAPSEVTAKVADGCTVTFSEETYY FT PMDDKISFTLQSMDKKRKEVNFALQLRIPKWCKQAGISVNGQLLQHAEGGRMAIVNRNW FT KKGDRVELHLPMEVTASTWYENSVTIERGPLVFALKMEEKWEKKEFEEPWYGPYYYSVT FT PTEPWNYGLVDFNRNKANEHARVTIHTEKQSSVFPWNKENAPIEIRMKARLVPSWKLYN FT EMAGPQPYSFCSGGEGPETEITLIPYGCTTLRITEFPVVGASR" FT misc_feature complement(319588..319668) FT /note="Signal peptide predicted for BF0281 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.672 between residues 27 and 28" FT CDS complement(319706..321769) FT /transl_table=11 FT /locus_tag="BF9343_0278" FT /old_locus_tag="BF0282" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3531 SWALL:AAO78637 (EMBL:AE016941) FT (687 aa) fasta scores: E(): 0, 79.03% id in 687 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT1003 SWALL:AAO76110 (EMBL:AE016930) (698 aa) fasta FT scores: E(): 6.7e-13, 31.35% id in 236 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT0137 SWALL:AAO75244 (EMBL:AE016926) (641 aa) fasta FT scores: E(): 6.6e-12, 26.49% id in 453 aa" FT /db_xref="GOA:Q5LIG9" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012878" FT /db_xref="UniProtKB/TrEMBL:Q5LIG9" FT /protein_id="CAH06057.1" FT /translation="MKKMKSLKGGLAGILFTAGLLAASCTSDQSSSAVTIVNRPDCTQT FT NVNYVGNRLPLKPMNFIKLPVGSIQPEGWLKKYLELQKDGLTGHLNEISAWLGKENNAW FT LTKGGDHGWEEVPYWLKGYGNLAYILKDQKMIDEAKVWLEGAFASQQPDGYFGPINERN FT GKRELWAQMIMLWCLQSYYEYSNDQRVIDLMTNYFKWQLSVPDEQFLEDYWENSRGGDN FT LLSVYWLYNRTGDQFLLELAEKIHRNTADWTRPSALPNWHNVNIAQCFREPATYYMMTG FT DSAMLKASYNVHNLIRRTFGQVPGGMFGADENARMGSIDPRQGVETCGLVEQMASDELM FT LCMTGDPLWAEHCEEVAFNSYPAAVMPDFKGLRYITCPNQTVSDSKNHHPGIDNRGPFL FT AMNPFSSRCCQHNHAQGWPYYAEHLILATPDNGVAAAMYAACKATVKVGDGNEITLHEQ FT TNYPFEETIRFTVNTPKAVSFPFYLRIPSWTEGATIFVNGKKVAANPEAGQYACINREW FT KDNDQVEIQLPMQLSMRTWQVNKNSVSVDYGPLTMSLKIDEDYVKKDSRATAIGDSKWQ FT EGADASQWPTYEIYAKTPWNYALVLGKNEPLKDFKVVHKEWPADNFPFTVASTPIEVKA FT IGRKVPSWVIDQYDLCSELPEMDAPKGEKEEITLIPMGAARLRVSAFPNTRE" FT misc_feature complement(321689..321769) FT /note="Signal peptide predicted for BF0282 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.349 between residues 27 and 28" FT CDS 322047..323153 FT /transl_table=11 FT /locus_tag="BF9343_0279" FT /old_locus_tag="BF0283" FT /product="putative lipoprotein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT glycosylhydrolase BT3467 SWALL:AAO78573 (EMBL:AE016940) FT (365 aa) fasta scores: E(): 2.2e-113, 68.57% id in 366 aa, FT and to Bacteroides thetaiotaomicron putative FT glycosylhydrolase BT3515 SWALL:AAO78621 (EMBL:AE016941) FT (389 aa) fasta scores: E(): 7.1e-102, 61.64% id in 365 aa, FT and to Bacteroides thetaiotaomicron putative FT glycosyslhydrolase BT2912 SWALL:AAO78018 (EMBL:AE016938) FT (1544 aa) fasta scores: E(): 4.7e-32, 38.33% id in 360 aa, FT and to Clostridium acetobutylicum beta-xylosidase, family FT 43 glycosyl hydrolase CAC1529 SWALL:Q97IW1 (EMBL:AE007663) FT (327 aa) fasta scores: E(): 2.4e-18, 38.39% id in 336 aa" FT /db_xref="GOA:Q5LIG8" FT /db_xref="InterPro:IPR006710" FT /db_xref="InterPro:IPR016828" FT /db_xref="InterPro:IPR023296" FT /db_xref="UniProtKB/TrEMBL:Q5LIG8" FT /protein_id="CAH06058.1" FT /translation="MKTKIYLLFITTLFFCAGCGNKSGGQKQESVSAAKDTYVNPLFPE FT GADPSALFHNGKYYYTHGTEDKIMLWETSDITDMAHAVCKIVWKPQDPSNSCHLWAPEI FT HYINDKWYIYYAADDGNTDNHQLYVLENSSPDPMEGKFEMKGSIITNPEWNWGIQATTF FT EHKGVRYLAWSGWSKRRTNAETQCIYIARMKDPWTLDSPRVLISKPEYEWERQWVNPDG FT SRTAYPIYVNEGPQFFHSKDNKTLILYYAASGSWSPYYCVGMLTADAESDLLDPASWTK FT SSVPVFQQSLENEVYGPGGLSFVPSPDGTEWYMIYHARQVTNGDTGSPETRNPRIQKIG FT WDAHGMPDLGIPVRAGVALPKPSGTLLK" FT misc_feature 322047..322118 FT /note="Signal peptide predicted for BF0283 by SignalP 2.0 FT HMM (Signal peptide probability 0.964) with cleavage site FT probability 0.560 between residues 24 and 25" FT CDS 323256..325070 FT /transl_table=11 FT /locus_tag="BF9343_0280" FT /old_locus_tag="BF0284" FT /product="putative exported glycosylhydrolase" FT /note="Similar to Thermoanaerobacter ethanolicus FT beta-galactosidase LacZ or LacA SWALL:BGAL_THEET FT (SWALL:P77989) (743 aa) fasta scores: E(): 1.9e-13, 25.83% FT id in 391 aa, and to Bacteroides thetaiotaomicron FT beta-galactosidase BT3513 SWALL:AAO78619 (EMBL:AE016940) FT (604 aa) fasta scores: E(): 7e-190, 70.46% id in 606 aa, FT and to Bacteroides thetaiotaomicron beta-galactosidase FT BT2922 SWALL:AAO78028 (EMBL:AE016938) (604 aa) fasta FT scores: E(): 6.2e-185, 69.91% id in 585 aa" FT /db_xref="GOA:Q5LIG7" FT /db_xref="InterPro:IPR006102" FT /db_xref="InterPro:IPR006103" FT /db_xref="InterPro:IPR006104" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013812" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LIG7" FT /protein_id="CAH06059.1" FT /translation="MKKSILIAVLTASIATSAFAQWKPAGDKIKTKWAEQVNPENVLPE FT YPRPVMERGEWKNLNGLWNYAITEKGAAPSAYEGQILVPFAIESSLSGVGKKVGPDKEL FT WYQRTFTVPASWKGKKVMLNFGAVDWKADIWVNDIKVGQHTGGFTPFSLDITAALATKG FT DNKLVVKVWDPTDRGPQPRGKQVNRPEGIWYTAVTGIWQTVWMEPVAERHITNVRTTSD FT IDRKKLTVDVTTSTSCPSEVVEVKVFDGKQLVATGKGLNGQTIDIQMPADAKLWSPASP FT TLYSMQIALLSNGKVTDKVDSYTAMRKYSTRRDKDGIVRLQLNNEDVFQFGPLDQGWWP FT DGLYTAPTDEALVYDIQKTKDFGFNMIRKHVKVEPARWYTHCDKLGIIVWQDMPNGDRE FT PEWQMYNYFTGNELNRSEESEQIYRKEWKEIMDYLYNYPCIGVWVPFNERWGQFKTEDI FT ATWTKKYDPSRLVNPASGGNHFPCGDILDLHHYPNPSLDFYDAGRATVLGEYGGIGLAL FT NEHLWEPNHNWGYVKFNSPEEVTKQYVEYGNELYRLISRGFSAAVYTQTTDVEMEVNGL FT MTYDRKVIKVNEAQVKAINTKICNSLNK" FT misc_feature 323256..323315 FT /note="Signal peptide predicted for BF0284 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.999 between residues 20 and 21" FT misc_feature 323358..323822 FT /note="Pfam match to entry PF02837 Glyco_hydro_2_N, FT Glycosyl hydrolases family 2, sugar binding domain, score FT -25.7, E-value 7.1e-06" FT misc_feature 323889..324176 FT /note="Pfam match to entry PF00703 Glyco_hydro_2, Glycosyl FT hydrolases family 2, immunoglobulin-like beta-sandwich FT domain, score 20.2, E-value 5.5e-05" FT CDS 325166..327676 FT /transl_table=11 FT /locus_tag="BF9343_0281" FT /old_locus_tag="BF0285" FT /product="putative exported glutaminase" FT /note="Similar to Aspergillus oryzae glutaminase A GtaA FT SWALL:Q9UVX9 (EMBL:AB029552) (690 aa) fasta scores: E(): FT 1.1e-51, 30.34% id in 603 aa, and to Bacteroides FT thetaiotaomicron glutaminase A BT3477 SWALL:AAO78583 FT (EMBL:AE016940) (840 aa) fasta scores: E(): 0, 71.29% id in FT 836 aa, and to Bacteroides thetaiotaomicron glutaminase A FT BT3512 SWALL:AAO78618 (EMBL:AE016940) (837 aa) fasta FT scores: E(): 0, 66.74% id in 836 aa" FT /db_xref="GOA:Q5LIG6" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR014870" FT /db_xref="UniProtKB/TrEMBL:Q5LIG6" FT /protein_id="CAH06060.1" FT /translation="MKKLFTMALAVGMLCNAQAADLYKASRNVALRAPAVPLITSDPYL FT SIWSPTDALNESSTMHWTGTEHPLLGAIRVDGKTYRFMGKDKLNLETLVPMTDTDTWQG FT SYTFDEPAAGWNALSFNAAGWKEGQGAFGTPDMPRVHTRWTTPDIWVRRDFQINDDMNG FT ETIYLKYSHDDVFELYLNGEKLVATDYSWNNDVLLELSDAAKKKLQKGKNVLAAHCHNT FT TGGAYVDFGLYRLNKQTTGFETAAVQKSVSVLPTQTYYTFTCGPVELDLVFTAPLMMDD FT LDLLSTPVNYISYRVRSLDKKQHDVQMYVETTPQLAINELTQPTRSKVIRRNGINYVQA FT GTIDQPILARKGDGICIDWGYAYLAGNIGANTAVSLGNYYGMKNEFVTKGSLLPTQAEC FT VTRRADQMPAMAYTDDLGKVGTDGKSGFLMLGYDDIYAIEYFYQPRMAYWKHDGKVSIF FT DAFERAKANYASVMERCRAYDEMILNDAEKAGGKEYSELCALAYRQVIAAHKLFKDADG FT NLLFFSKENNSNGCINTVDLTYPSAPLFLAYNPELQKGMMTSIFEYSASGRWNKPFPAH FT DLGTYPIANGQVYGGDMPIEEGGNMVVLAAAIAKVEGNADYAKKYWDLLTIWTDYLAEY FT GQDPENQLCTDDFAGHWAHNANLSVKAIMGVAAYSEMARMLGMDDVADRYAAKAKAMAT FT KWEQMAREGDHYRLAFDRENTWSQKYNMVWDKMWNLNLFPNNVIEKEISYYQTKLQNPY FT GLPLDSRKEYTKSDWIMWTAAMSSDKATFEKFISPVYKYANETVSRVPLSDWHHTDSGK FT FVGFKARSVIGGYWMKVLMDKMQK" FT misc_feature 325166..325222 FT /note="Signal peptide predicted for BF0285 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.988 between residues 19 and 20" FT misc_feature 325379..325402 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(327825..330293) FT /transl_table=11 FT /locus_tag="BF9343_0282" FT /old_locus_tag="BF0286" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4324 SWALL:AAO79429 (EMBL:AE016944) FT (880 aa) fasta scores: E(): 1.5e-31, 24.88% id in 896 aa, FT and to Bacteroides thetaiotaomicron hypothetical protein FT BT1591 SWALL:AAO76698 (EMBL:AE016932) (910 aa) fasta FT scores: E(): 1.4e-25, 27.28% id in 678 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT1247 FT SWALL:AAO76354 (EMBL:AE016931) (863 aa) fasta scores: E(): FT 3.2e-23, 27.67% id in 831 aa" FT /db_xref="GOA:Q5LIG5" FT /db_xref="InterPro:IPR002890" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:Q5LIG5" FT /protein_id="CAH06061.1" FT /translation="MTIVADSWNTVSHYYLFSLPLFIMKIHSALTILCLLCTIHCAAAP FT QKAVSDTLLSARFNRYARENPIEKLYLHQDRTNYYAGETIWFKVYQTLSSSATEASRIV FT YIDLSNSKGEIVKQVKYPLADGAASGSLSIPEHLHAGHYQLRAYTRWMQNFDPEFFFHR FT ELTIYGNSEKDNIPQQTTKFKLRFFPEGGNLINGLTSRIAFEVVDANTGKGVQTEGVIL FT NAHGDSIRKFATSHLGKGSFFFIPQKKEKYIARLAGDNTDFKIPSISEQGFVMTVKHLK FT EALRILLTQNIGPSTKNSVYSLILHQEGRLIAVLPVDGSQPRTLFDLPLDKLPTGVFTL FT TLIDEDYHAYCERLVFTHFPETLNLKLSSTISVQEGHRKMSVNIRSTDKKGIPQPGSFS FT LAVAQTFLEQPTIRDNFSTYLFLSSNLKGQTEQPLSYWNPEDTESLSKIELLLLTQGWR FT RYSLEVFNQPDNLPRYPMEQSLILSGKVENINKQKAKSVELQAILRQDSLKQFITCPLD FT GQKRFSLSGISFEGTKEVMLSATDKNGKTYPIKLDDSIPVPSVKYMPSPFAPDSSFHVQ FT WDITKSYIPQKEIDKQLFELGEVKVTARKKDPIEKRRPYSEGFVKTSTQVKASNSFGDV FT RQLLRTVPGITMVPNPDKTKSNLQYAHINGLPGGTVAALVLDGYIAKDPEVVYSMEASR FT IERVEVLQQTSTQFGGFSSYGGTIVLYSRPIQGEVIATNNKICQWIGYNQTKEFYTPTL FT SDHSFFEHSEQRNTLYWNPTVKTDKEGRAQVSFFLNDQENGEYVIHCEGYSEEGLIGTD FT FRVTEVPEHP" FT misc_feature complement(328656..328679) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(330313..333930) FT /transl_table=11 FT /locus_tag="BF9343_0283" FT /old_locus_tag="BF0287" FT /product="putative glycosylhydrolase" FT /note="Similar to Bacillus sp. GL1 Alpha-D-mannosidase FT SWALL:Q9AJR6 (EMBL:AB026114) (1047 aa) fasta scores: E(): FT 2e-57, 30.4% id in 855 aa, and to Bacteroides FT thetaiotaomicron alpha-mannosidase BT3774 SWALL:AAO78879 FT (EMBL:AE016942) (1198 aa) fasta scores: E(): 0, 70.31% id FT in 1206 aa, and to Clostridium perfringens FT alpha-mannosidase CPE2080 SWALL:Q8XIN5 (EMBL:AP003192) FT (1044 aa) fasta scores: E(): 1.6e-71, 32.5% id in 843 aa" FT /db_xref="GOA:Q5LIG4" FT /db_xref="InterPro:IPR000421" FT /db_xref="InterPro:IPR000602" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR011013" FT /db_xref="InterPro:IPR011330" FT /db_xref="InterPro:IPR011682" FT /db_xref="InterPro:IPR013780" FT /db_xref="InterPro:IPR015341" FT /db_xref="UniProtKB/TrEMBL:Q5LIG4" FT /protein_id="CAH06062.1" FT /translation="MKLHIAMLAATLLLSGGASYAQGNKQEKKAKAYMVADAHLDTQWN FT WDVQTTIKEYVWNTINQNLFLLKKYPNYVFNFEGGVKYAWMKEYYPAQYEEMKKYIGEG FT RWHISGSSWDATDALVPSTESFIRNIMLGQQYYRQEFGVESTDIFLPDCFGFGWTLPTI FT ASHCGLIGFSSQKLDWRVHPFYGKSKHPFTIGLWKGIDGSSIMLAHGYDYGRRWNDEDL FT SENEQLKELAGRTPLNTVYRYYGTGDIGGSPTLASVRSVEKGLRGNGPVEIVSATSDQL FT YKDYLPYKNHPELPVFDGELLMDVHGTGCYTSQAAMKLYNRQNELLGDAAERAAVTAEW FT LNQAKYPGSTINEAWKRFIYHQFHDDLTGTSIPRAYEFSWNDELISLKQFSNVLTSSIH FT GIGRELDTRVSGIPVILYNALGFAVTDIAEIELDLPKAPKGITVYDEKGKKVSAQLISY FT TDGKARILVEATVPATGYVVYDIRTSGTGASNVSTNVNTLENSLYKITLDKNGDIVSLT FT DKKNGKELVKAGKAIRLALFTQNKSYNWPAWEVLKETTDRTPVSITDDVKITLVEDGTL FT RKSLCVEKRHGESVFRQYIRLYEGSRAERIDFYNEIDWQSTNALLKAEFPLNLENEKAT FT YDLGIGSIQRGNNTETAYEVYAQYWADLTDRDGSYGVSVMNDSKYGWDKPDNHTIRLTL FT LHTPETRGGYAYQDHQDLGHHTFTYSLIPHQGALDKPATVEKAEKLNQQLKAFRTEKHK FT GNVGKSFSFVASDNRNVLIKALKKAEETDEYVVRVYETEGRKAQSATLTFAGEIISASE FT ANGTEKTIGNATFEGNKLQVNITPYSVRTYKVRLKPSGREASPIEYAALPLDYDRKCAS FT YNEFRGEGDFESGYSFAAELLPDSLIAGQITFRLGEKEIANGMTCEGDTLQLPAGNKYN FT RLYILAASTEGDNQADFRIGKQTASFVVPSYTGFIGQWGHKGHTEGYLKDAEIAYVGTH FT RHASNGDQPYEFTYMFKFGMDIPKGATSVILPRNEKVVLFAATLVAENEPATTVAGTLF FT RTNNVGNAATAGNDEEAVRENILKRAKIIACSGYTNDEEKPDFLLDGKTDTKWCDVSQT FT PNYVDFDLGEAQNISGWKMVNAGQESHSYITNGCFLQGKMNPGDEWTTLDAIDGNHANV FT VSRPLNYDGKVRYIRLLVTRPTQSTGGRDTRIYELEVYK" FT misc_feature complement(332347..333921) FT /note="Pfam match to entry PF01074 Glyco_hydro_38, Glycosyl FT hydrolases family 38, score -33.6, E-value 6.6e-19" FT misc_feature complement(333868..333930) FT /note="Signal peptide predicted for BF0287 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.912 between residues 21 and 22" FT CDS 334274..337477 FT /transl_table=11 FT /locus_tag="BF9343_0284" FT /old_locus_tag="BF0288" FT /product="putative TonB dependent receptor outer membrane FT protein" FT /note="Similar to Bacteroides thetaiotaomicron outer FT membrane protein SusC SWALL:Q45780 (EMBL:L49338) (1038 aa) FT fasta scores: E(): 7.3e-47, 28.5% id in 1084 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT3854 FT SWALL:AAO78959 (EMBL:AE016942) (1012 aa) fasta scores: E(): FT 1.2e-91, 36.21% id in 1041 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT2461 SWALL:AAO77568 FT (EMBL:AE016936) (1134 aa) fasta scores: E(): 3.2e-81, 30.7% FT id in 1065 aa" FT /db_xref="GOA:Q5LIG3" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LIG3" FT /protein_id="CAH06063.1" FT /translation="MRKKEQMFWLASRSRMWRIPLCMAAFSLLPSAYSFASAENPATET FT VLAVNSVQQQRTVKGIVIDANGEAVIGANVKEPGSTTGTITDMNGEFSLSVGPKATLEI FT SFIGYTTQKVNVGASNTVKVILKEDTKVLDEVVITGFGMSQKKATLTGAVAAIASTDIE FT RSNATTASGALVGKIAGINTRQNDGRPGASTQLQIRNMGAPLYVIDGVVSDDGQFNNMD FT FNDIESISILKDASAAIYGVRAANGVVVVTSKKGQRNSKNSVSINAYYGWQHNSRYVQP FT AKTKDYVNAYVSAETWAKKADNDRRYNKEEYAKWMAGTEKNYQGFDWSDYIWITAPQSY FT ISANLSGGTDKANYYVAVSHIDQEATVRGYGGFRRTNAQMNIDMNISDRFKIGATMNGR FT IEDRHHPGVPGADDTWLPRFATMKNQPTKRPYANDNPLYPQLVSDQKETNFALLNYDTS FT GKVSDVWRVLQMQTTAEYEILKGLKAKGMLGYYYAYNELDNQEYTFKLYGYNEKTGEYY FT ETAAMDNPYRERNREKVEDQFANFQLNFDRRFGNHSINAVASFEATQRKRPKSWVHSVP FT VANGMDLIRFKEIVEYNDTGNNTEARMGWLGRINYSFADRYLIELIGRWDGSWKFKPEN FT RWGFFPSASLGWRISEENFWKESKIANVFSNLKIRGSYGVVGDDNVSDYAAFDYLPGYK FT YNNGGAVLDGDWVVGTETRGLPNKTLSWMESKILDIGVDMGFFNNRLNAQVDFFQRIRD FT GIPESRYDVLIPNEAGFSLPKENLRSDKHVGFDAMVNWTDHVSDFNYSVGANMTYSRFW FT DWEQYDTRHSNSWDVYRNSIWHRVGYVNWGYEAVGRFTSWEQIATYPIDNDRKGNKTVV FT PGDIMYKDVNGDGVINYMDERPIGYRSDSTPTLNFGINLSASWKGFDLAMDWTGSGMTS FT WQQQYETARPFQNDGNSPEEVFKDAWHLADIWDADSQLIPGKYPLIRLNNEETSAYDKS FT TFWLHNVKYIKLRNLEFGYTLPKRIVAKAGISNLRLYVSGTNLFSISNIPFMDPECIDS FT NGLDYPTMRVVNLGINLKF" FT misc_feature 334274..334381 FT /note="Signal peptide predicted for BF0288 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.813 between residues 36 and 37" FT misc_feature 334274..334570 FT /note="PS00430 TonB-dependent receptor proteins signature FT 1." FT CDS 337485..339371 FT /transl_table=11 FT /locus_tag="BF9343_0285" FT /old_locus_tag="BF0289" FT /product="putative lipoprotein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein, putative outer membrane protein FT BT3855 SWALL:AAO78960 (EMBL:AE016942) (643 aa) fasta FT scores: E(): 2.9e-18, 29.32% id in 682 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT0440 FT SWALL:AAO75547 (EMBL:AE016927) (627 aa) fasta scores: E(): FT 4.3e-18, 25.58% id in 598 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LIG2" FT /protein_id="CAH06064.1" FT /translation="MKNRYFLMALAAAGVLSLSSCNGFLDTKPNDIMTQDQVYADPALV FT KSVLANFYGRITFGQRNEAVEDYFMLDEAIHYDNNSEENIDRNKWRPYDYTLIRNLNQF FT LQGIKGSTAVDEETKRLYEGEVRYIRAWTYFCIARGLGGIPIVGDDVFDYTGGMDITTI FT QVPRSTEAETYDYIIKECQEAAAMMSKQTNKNNSRANYWVAKMLEARAAITAASLATYN FT TVAEHPQLRTAGGEVGIPADKAEGYYRTALAAAKEVIEGAADGTASPYRLMLAADKTSE FT ALADNFFKAVCEKSGNTEVIWTRDYATPGYGHEFTKNCLPKSIEQDTGSDRMSVLLNLV FT EAYESTDATESERGKAAKFDIGTLDDPKFFDDPMDLFADRDPRLAATVLLPGSTFDGKL FT IELQAGQLNKVNGQWVERTGRRNETDAQGRLITANNGPFGGNEREINRTGFFVRKYLDK FT TPLAGTQGTKSAMWNVYFRISEAYLIAAEASWELSRNNSDVEALKYINAVRERAGIQSL FT TSIDHQKIMHEYQVEFAFEGHRWWDLKRWMEADNIWTGNENDRTAQRLGLWPYRVVADG FT DANNGKWVFVEKNMQTLDLWRKPLKCTDVQYYSEIDNGWINNNPKLVKNPYQ" FT misc_feature 337485..337559 FT /note="Signal peptide predicted for BF0289 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.640 between residues 25 and 26" FT misc_feature 337515..337547 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 339391..340098 FT /transl_table=11 FT /locus_tag="BF9343_0286" FT /old_locus_tag="BF0290" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3856 SWALL:AAO78961 (EMBL:AE016942) (231 aa) FT fasta scores: E(): 3.5e-10, 26.97% id in 241 aa" FT /db_xref="InterPro:IPR024278" FT /db_xref="PDB:3HN5" FT /db_xref="UniProtKB/TrEMBL:Q5LIG1" FT /protein_id="CAH06065.1" FT /translation="MKTISKIFSVLLLGAMMFTSCMKDNYDAPESMLTGRVMYNGEALQ FT LRGNEAVQLQLYQHGYAKHDPINVYVNQDGMYSANLFDGEYQMITKSGNGPWTSEGRDT FT INVTVAGNTVQDVEVTPYYLVRDAQMTLEGNKVNASFKVEKVAGGGIDRVFFMLSTTQF FT VNDAEHNVDRYDETDNLDAYDETGKLYTFATRDYTDNSMFQTALKRGTLFGRICIWPKG FT SDQGIYSKVIRLK" FT misc_feature 339391..339459 FT /note="Signal peptide predicted for BF0290 by SignalP 2.0 FT HMM (Signal peptide probability 0.993) with cleavage site FT probability 0.685 between residues 23 and 24" FT misc_feature 339421..339453 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 340193..340612 FT /transl_table=11 FT /locus_tag="BF9343_0287" FT /old_locus_tag="BF0291" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIG0" FT /protein_id="CAH06066.1" FT /translation="MNKSYFIGILIFASMTDIMANTSKNEEVEAIVSSIEQTEFSGYQL FT VLLTGAGSGIIQSVELINNKTIRVSVIRGSHVRIDHRANGLPVYTENFFMDDSSTFEFE FT ATTESFLIEADYNGESSSSGTKRYETRMYDLKWVP" FT CDS 340736..341713 FT /transl_table=11 FT /locus_tag="BF9343_0288" FT /old_locus_tag="BF0292" FT /product="putative exported endo-arabinase" FT /note="Similar to Bacillus subtilis endo-arabinase FT SWALL:O07078 (EMBL:D85132) (324 aa) fasta scores: E(): FT 1.5e-20, 33.33% id in 312 aa, and to C-terminus of FT Bacteroides thetaiotaomicron arabinan FT endo-1,5-alpha-L-arabinosidase A precursor BT3516 FT SWALL:AAO78622 (EMBL:AE016941) (637 aa) fasta scores: E(): FT 2e-109, 80.78% id in 307 aa, and to Bacteroides FT thetaiotaomicron arabinan endo-1,5-alpha-L-arabinosidase A FT precursor BT2900 SWALL:AAO78006 (EMBL:AE016938) (325 aa) FT fasta scores: E(): 2.4e-100, 70.09% id in 321 aa" FT /db_xref="GOA:Q5LIF9" FT /db_xref="InterPro:IPR006710" FT /db_xref="InterPro:IPR016840" FT /db_xref="InterPro:IPR023296" FT /db_xref="UniProtKB/TrEMBL:Q5LIF9" FT /protein_id="CAH06067.1" FT /translation="MKFFLFSLFTVFSFCVPSIAQQYSNPVINYSLPDPTVIKADDGYY FT YLYATENIRNLPIHRSKDMVNWSFVGTAFTNETRPTFEPKGNLWAPDINKIGDRYVMYY FT SMSVWGGEWTCGIGVATADKPEGPFTDHGKLFRSNEIGIQNCIDPFYIEDGGKKYLFWG FT SFHGIYGAELSDDGLSLKEGMKPQQVAGTAYEGTYIHKRGGYYYLFASIGRCCEGLKST FT YTTVVGRSKYLFGPYVDKKGESMLENHHEVLIDKNEAFVGPGHNSEIVTDDKGADWVFY FT HAVSVANPEGRVLMLDRVNWKKGWPVVEGDTPSLQAKAPVIRHK" FT misc_feature 340736..340795 FT /note="Signal peptide predicted for BF0292 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.908 between residues 20 and 21" FT misc_feature 340796..341701 FT /note="Pfam match to entry PF04616 Glyco_hydro_43, Glycosyl FT hydrolases family 43, score 91.9, E-value 8.5e-26" FT repeat_region 341922..342434 FT /note="hit to rep1 1..513 score: 2565 percent id: 100.00" FT CDS 342750..343868 FT /transl_table=11 FT /locus_tag="BF9343_0289" FT /old_locus_tag="BF0295" FT /product="putative exported glycosylhydrolase" FT /note="Similar to Bacillus circulans alpha-1,6-mannanase FT precursor AmaN6 SWALL:Q9Z4P9 (EMBL:AB024331) (589 aa) fasta FT scores: E(): 8.1e-39, 34.64% id in 381 aa but truncated at FT the C-terminus and to entire protein of Bacteroides FT thetaiotaomicron alpha-1,6-mannanase BT3524 SWALL:AAO78630 FT (EMBL:AE016941) (420 aa) fasta scores: E(): 1.7e-27, 44.86% FT id in 419 aa, and to entire protein of Bacteroides FT thetaiotaomicron alpha-1,6-mannanase BT3521 SWALL:AAO78627 FT (EMBL:AE016941) (429 aa) fasta scores: E(): 4.5e-25, 39.9% FT id in 401 aa" FT /db_xref="GOA:Q5LIF8" FT /db_xref="InterPro:IPR005198" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012341" FT /db_xref="InterPro:IPR014512" FT /db_xref="UniProtKB/TrEMBL:Q5LIF8" FT /protein_id="CAH06068.1" FT /translation="MKNKVLIIVAILLLLPNAMAWAHQPADGNLKHFTKKDATTAMDAF FT HSTFYNPDMKLYAISSDMKGRAAIWVQAIYWDMIMNAYKRTKAPKYRRLIEEVYQGGYE FT QYDKYNWDNKIEWFIYDDMMWWIISLARAYEITNDPKYLAHASSGFYHVWKESYDKERG FT GLWWNFKHDGKMACINYPTTVGAMTLYNVTKDPDYLEKAKSVYAWSRDVFFDKEKGRIA FT DNMHYHFQRQNGMDIDWTTQLYNQATFIGSAVMLYKATGEKAYLDDAVLAADYVRNEMC FT DADGLLPFKNGVEQGIYAAIFAQYIIRLIEDGNQPQYMDWLRHNIDVAWNNRDVNRNVT FT FKDAAKPCPTGVMESYDASGCPALMQVISPFK" FT misc_feature 342750..342815 FT /note="Signal peptide predicted for BF0295 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.965 between residues 22 and 23" FT misc_feature 342822..343829 FT /note="Pfam match to entry PF03663 Glyco_hydro_76, Glycosyl FT hydrolase family 76, score -64.7, E-value 2.3e-10" FT CDS 343897..346059 FT /transl_table=11 FT /locus_tag="BF9343_0290" FT /old_locus_tag="BF0296" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3525 SWALL:AAO78631 (EMBL:AE016941) (721 aa) FT fasta scores: E(): 0, 81.02% id in 722 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LIF7" FT /protein_id="CAH06069.1" FT /translation="MSKRVLVLIGLFLACGGVYSQTATGTKTNFQTAESWKPETDVRAD FT AVMVYGTLDKKGVTFEQRVQSWRDKGYRAEFMTGVAWGDYQDYFLGKWDGVKDHLKEGQ FT RDREGREIAHGHLIPYIVPTESFIRYMQEKQIKRVIDAGITSIYLEEPEFWMRGGYSEA FT FKSEWQKYYGFPWRAQHESPENTYLSNKLKYYLYYNALNQIFTYAKTYGKSKGLDVKCF FT VPTHSLVNYTSWQIVSPEASLASLDCVDGYIAQVWTGTAREPNYYDGVKKERVFENAFL FT EYGCMKSMTAPLNRKMYFLTDPIEDRAKDWLDYKINYQATFAAQLMYPAVDTYEVMPWP FT DRIYQGLYQVAGTDRKERIPRDYSTQMQIMVNTLNDIRTSETQVSGTHGIGVLMANSLM FT FQRFPGHDGYDDPQFSSFYGQTLPLLKRGIPVELVHMENTPFGDTFKGLKVLVMSYSNM FT KPMEPRYHDFLADWVRKGGALIYCGEDIDPYQSVLEWWNSNGNQYKAPSEHLFEKLGLD FT RVPAAGTYPCGKGMVTVIREDPKHFVLKSGNDWQYFDAVSAAYRKSAGKEVELKNSFLL FT ERGPYTIAAVLDESVSDAPMELSGVYIDLFDKDLPVLTHKVIRPGEQGYLYNVKRISGR FT AKAKVLCGASRIYDEKAGKRSYSFVAKSPLHTTNASRILLPKQPIRVCVNGKEEPQPEK FT LWEERSRTLLLKFENDPAGVQVDIEW" FT misc_feature 343897..343956 FT /note="Signal peptide predicted for BF0296 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.876 between residues 20 and 21" FT CDS 346053..348566 FT /transl_table=11 FT /locus_tag="BF9343_0291" FT /old_locus_tag="BF0297" FT /product="putative exported glutaminase" FT /note="Similar to Aspergillus oryzae glutaminase A GtaA FT SWALL:Q9UVX9 (EMBL:AB029552) (690 aa) fasta scores: E(): FT 3.8e-40, 30.36% id in 606 aa, and to Bacteroides FT thetaiotaomicron glutaminase BT3526 SWALL:AAO78632 FT (EMBL:AE016941) (825 aa) fasta scores: E(): 0, 79.29% id in FT 826 aa, and to Bacteroides thetaiotaomicron glutaminase A FT BT3477 SWALL:AAO78583 (EMBL:AE016940) (840 aa) fasta FT scores: E(): 6e-108, 49.34% id in 837 aa" FT /db_xref="InterPro:IPR014870" FT /db_xref="UniProtKB/TrEMBL:Q5LIF6" FT /protein_id="CAH06070.1" FT /translation="MVKTIKKESEVMKLKLSTLFLGAAAMLSSCGAPQDVKSEKSEMRA FT PAYPLVMIDPYTSAWSFTDNLYDGPVKHWTGKDFPFLGVAKVDGQIYRFMGTEELELLP FT LVKTSEQGRWTAKYTTKKPADGWQNADFNDAAWKEGEGAFGTMENESTAKTQWGEEYIW FT IRRKADIKDNLQGKNVYLEYSHDDDAIIYVNGVKVVDTGNSAKKHMLAKLPEEAVAALK FT QGENLIAIYCNNRVANGLIDCGLLVEKDNTQNFTQTAVQKSVDVQAMQTNYEFTCGPVD FT LKLAFTSPLFMDNLDLMTRPVSYLTYEVASNDGNKHNVELYFEAGPQWALDQPHQEAVA FT ESFTEGNLLYLKTGSRNQEILGKKGDDVRIDWGYFYMAADKENSSCATGEGKTLRKSFI FT DGKLTSSKTDGSDKLALVRSLGETKKAEGHLLLGYDDLYSIQYFGENLRPYWNRNGNET FT IQSQFAKADKEYDAVMDKCAAFDANLMKEATEVGGRKYAELCALAYRQAIAAHKLVEAP FT NKDLLFLSKENFSNGSIGTVDITYPSAPLFLVYNPELAKGLMNHIFYYSESGKWNKPFA FT AHDVGTYPLANGQTYGGDMPIEESGNMLILSAAIAIVEGNADYAQKHWDVLTTWTDYLA FT QYGLDPENQLCTDDFAGHFAHNANLSIKAILGVASYGYLADKLDKKEVAEKYTQKAKEM FT AAEWVKMADDGDHYRLTFDKPGTWSQKYNLVWDKLMNLQIFPETVAQKEIAYYLGKQNQ FT YGLPLDNRETYTKTDWIMWTATLAPDKATFEKFIDPVYLFMNETTDRVPMSDWVFTDRP FT NQRGFQARSVVGGYYIKMLEKKLKK" FT misc_feature 346053..346145 FT /note="Signal peptide predicted for BF0297 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.737 between residues 31 and 32" FT CDS 348685..350970 FT /transl_table=11 FT /locus_tag="BF9343_0292" FT /old_locus_tag="BF0298" FT /product="putative exported alpha-1,2-mannosidase" FT /note="Similar to Bacillus sp. M-90 alpha-1,2-mannosidase FT precursor AmaN2 SWALL:Q9WXI8 (EMBL:AB025248) (1976 aa) FT fasta scores: E(): 1.5e-32, 31.44% id in 757 aa, and to FT Bacteroides thetaiotaomicron alpha-1,2-mannosidase BT3527 FT SWALL:Q8A1Y1 (EMBL:AE016941) (763 aa) fasta scores: E(): 0, FT 86.33% id in 761 aa, and to Bacteroides thetaiotaomicron FT putative alpha-1,2-mannosidase BT3990 SWALL:Q8A0N1 FT (EMBL:AE016943) (755 aa) fasta scores: E(): 0, 72.2% id in FT 759 aa" FT /db_xref="GOA:Q5LIF5" FT /db_xref="InterPro:IPR005887" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012939" FT /db_xref="UniProtKB/TrEMBL:Q5LIF5" FT /protein_id="CAH06071.1" FT /translation="MKKLALLLVGVLGTAFCTFAKSTTEPVDYVSPLVGTQSKHALSTG FT NTYPAIAMPWGMNFWVAQTGKMGDGWAYTYDADKIRGFKQTHQPSPWINDYGQFAIMPV FT TGKVVFDQDQRASWFSHKAEVAKPYYYKVYLADHDVTTEIAPTSRAAMFRFTFPESKDS FT YVVVDAFDNGSYVKVIPEENKIIGYTTKNSGGVPENFKNYFVLVFDKPFTFTAAVTNGN FT IRPGELESKDKHAGGIIGFSTRRGETVNVRVASSFISPEQAEQNLKELGKDNLEAVAAK FT GRQEWNKVLGRIEVEDDNTDHLRTFYSCLYRSVLFPRSFYELDAKGKPVHYSPYNGKVL FT PGYMFTDTGFWDTFRCLFPFLNLMYPSMNEKMQEGLANTYKESGFLPEWASPGHRGCMV FT GNNSASVVADAYLKGLKGYDIETLWEAVKHGANAVHPQVSSTGRLGYEYYNQLGYVPYN FT VGINENAARTLEYAYDDWCIYQLGKALNKPEEEIAVYAQRAMNYKNLYDKEHKLMRGKN FT KDGQFQSPFNPLKWGDAFTEGNSWHYTWSVFHDPQGLIDLMGGQQGFNQMMDSVFILPP FT VFDDSYYGGVIHEIREMQIMNMGQYAHGNQPIQHMLYLYNYSGQPWKAQHWIREVMDKL FT YTPNADGYCGDEDNGQTSAWYVFSAMGFYPVCPGTDQYVMGTPYFKQMKLHLENGKTVQ FT ISAPGNSDENRYIASMTVNGKTLTRNYLTHKELMNGAKITMKMSSTPNKQRGVRESDFP FT YSFSKEVR" FT misc_feature 348685..348744 FT /note="Signal peptide predicted for BF0298 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.843 between residues 20 and 21" FT CDS 351014..352480 FT /transl_table=11 FT /locus_tag="BF9343_0293" FT /old_locus_tag="BF0299" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3528 SWALL:AAO78634 (EMBL:AE016941) FT (487 aa) fasta scores: E(): 2.4e-176, 85.97% id in 485 aa, FT and to Xanthomonas axonopodis hypothetical protein Xac3082 FT XAC3082 SWALL:Q8PI16 (EMBL:AE011951) (487 aa) fasta scores: FT E(): 4.9e-100, 50.72% id in 483 aa" FT /db_xref="GOA:Q5LIF4" FT /db_xref="InterPro:IPR008313" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012341" FT /db_xref="UniProtKB/TrEMBL:Q5LIF4" FT /protein_id="CAH06072.1" FT /translation="MPGKNSKKMIGACVVTAALLCAPSALKAEGMLSHYTCVADAIQKD FT NRPEPAKRLFRSQAVENEIIRVQKLLRNSKLAWMFTNCFPNTLDTTVHFRKGKDGKPDT FT FVYTGDIHAMWLRDSGAQVWPYVQLANSDPELKTMLAGVINRQFKCINIDPYANAFNDG FT PKGGEWMSDLTDMKPELHERKWEIDSLCYPLRLAYQYWKTTGDASIFDEEWIQAITNIL FT RTFKEQQRKDGVGPYKFQRKTERALDTVTNDGLGNPVKPVGLIVSTFRPSDDATTLQYL FT VPSNFFAVSSLRKAAEILTTVNKKTALANECKALANEVETALKKYAVYNHPKYGKIYAF FT EVDGFGNHMLMDDANVPSLLAMPYLGDVSIDDPIYQNTRRFVWSLDNPYFFKGKAGEGI FT GGPHIGYDMVWPMSIMMKAFTSKDDAEIKSCIEMLMNTDAGTGFMHESFHKDNPEKFTR FT AWFAWQNTLFGELILKLVNEGKVDMLNSIQ" FT misc_feature 351014..351094 FT /note="Signal peptide predicted for BF0299 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.768 between residues 27 and 28" FT CDS 352668..353789 FT /transl_table=11 FT /locus_tag="BF9343_0294" FT /old_locus_tag="BF0300" FT /product="putative aldose 1-epimerase" FT /note="Similar to Sus scrofa aldose 1-epimerase Mut FT SWALL:Q9GKX6 (EMBL:AB044390) (342 aa) fasta scores: E(): FT 6.9e-47, 43.21% id in 324 aa, and to Bacteroides FT thetaiotaomicron aldose 1-epimerase precursor BT3532 FT SWALL:AAO78638 (EMBL:AE016941) (377 aa) fasta scores: E(): FT 2.2e-130, 86.21% id in 370 aa, and to Escherichia coli, and FT Shigella flexneri aldose 1-epimerase GalM or B0756 or FT SF0548 SWALL:GALM_ECOLI (SWALL:P40681) (346 aa) fasta FT scores: E(): 9.4e-41, 39.76% id in 337 aa" FT /db_xref="GOA:Q5LIF3" FT /db_xref="InterPro:IPR008183" FT /db_xref="InterPro:IPR011013" FT /db_xref="InterPro:IPR014718" FT /db_xref="InterPro:IPR015443" FT /db_xref="InterPro:IPR018052" FT /db_xref="UniProtKB/TrEMBL:Q5LIF3" FT /protein_id="CAH06073.1" FT /translation="MWALGALFVAGCAETEKATTDSGLVKSNFQTEVGGKKTDLYVLRN FT QNNMEVCVTNFGGRIVSVMVPDKEGVMRDVVLGFDSIQDYISKPSDFGASIGRYANRIN FT QGKFTLDGVEYQLPRNNYGHCLHGGPKGFQYQVYDAKQVGPQELELTYLSKDGEEGFPG FT NITCKVIMKLTDDNAIDIKYEAETDKPTIVNMTNHSYFNLDGDAGSNADHLLTIDADAY FT TPVDSTFMTSGEIVTVEGTPMDFRTPTPVGKRINDFDFVQLKNGNGYDHNWVLNAKGDI FT TRKAATLESPKTGIVLDVYTDEPGIQVYAGNFLDGSLTGKKGITYNQRASVCLETQKYP FT DTPNKPEWPSAVLRPGETYNSHCIFKFSVDNGK" FT misc_feature 352782..353765 FT /note="Pfam match to entry PF01263 Aldose_epim, Aldose FT 1-epimerase, score 409.6, E-value 2.5e-120" FT misc_feature 353247..353276 FT /note="PS00545 Aldose 1-epimerase putative active site." FT CDS 353893..355113 FT /transl_table=11 FT /locus_tag="BF9343_0295" FT /old_locus_tag="BF0301" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein, putative transport protein BT4459 FT SWALL:AAO79564 (EMBL:AE016945) (390 aa) fasta scores: E(): FT 1.3e-48, 36.52% id in 397 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein, putative FT membrane-associated protein BT2780 SWALL:AAO77886 FT (EMBL:AE016937) (395 aa) fasta scores: E(): 1.5e-46, 35.84% FT id in 399 aa, and to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT1547 SWALL:AAO76654 (EMBL:AE016932) FT (391 aa) fasta scores: E(): 2.7e-40, 32.39% id in 389 aa, FT and to Xanthomonas campestris transport protein YxaH or FT XCC2581 SWALL:Q8P7N0 (EMBL:AE012370) (414 aa) fasta scores: FT E(): 8.5e-29, 32.16% id in 429 aa" FT /db_xref="GOA:Q5LIF2" FT /db_xref="InterPro:IPR007349" FT /db_xref="UniProtKB/TrEMBL:Q5LIF2" FT /protein_id="CAH06074.1" FT /translation="MTHTQTITPKKRINSIDALRGFALIGIMLLHCMERFDLTLAPVVE FT SPFWQAIDTAVYDSLYFLFSGKSYAMFSLLFGLSFFMQMESQAAKGVDFRGRFLWRLAL FT LFLFGYINGLVYMGEFFMVYAVLGVFLIPLYKVPTRWLLVLCVLLFLQIPAVISFVSLL FT SDNVANEPTAAAAYMDRLFERAADVFINGSLMDVLSFNTFDGQSAKCLWVFNNFRYLQL FT LGLFIAGMLIGRQGIHKSEEKMVKYSRLFLPYCLAFWAVFYAVAFLLPVWGVDGFALRV FT GQTLFKTYGNLGQMMVYFCGFTLLYYRYKGQKVLDRIAPVGRMSVTNYMAQSIVGVSLF FT YGFGGNFAVEFNYLQSFLLGAAFCVIQIAYSNWWIKRFYYGPMEWLWRSLTWFQVVPLS FT RRKASLG" FT misc_feature 353920..354357 FT /note="Pfam match to entry PF04171 DUF405, Protein of FT unknown function (DUF405), score 57.3, E-value 2.8e-14" FT misc_feature order(354070..354138,354196..354294,354313..354381, FT 354547..354606,354640..354708,354766..354819, FT 354853..354921,354949..355017) FT /note="8 probable transmembrane helices predicted for FT BF0301 by TMHMM2.0 at aa 60-82, 102-134, 141-163, 219-238, FT 250-272, 292-309, 321-343 and 353-375" FT misc_feature 354622..355074 FT /note="Pfam match to entry PF04235 DUF418, Protein of FT unknown function (DUF418), score 63.6, E-value 3.5e-16" FT CDS 355163..358156 FT /transl_table=11 FT /locus_tag="BF9343_0296" FT /old_locus_tag="BF0302" FT /product="putative exported carbohydrate-binding protein" FT /note="C-terminus is similar to Streptomyces sioyaensis FT endo-1,3-beta-glucanase SWALL:Q9L816 (EMBL:AF217415) (478 FT aa) fasta scores: E(): 3.8e-06, 35% id in 140 aa, and the FT C-terminus of BF0302 is similar to the C-terminus of FT Ralstonia solanacearum putative transmembrane protein FT RSP0881 or RS01652 SWALL:Q8XRH3 (EMBL:AL646081) (767 aa) FT fasta scores: E(): 7.4e-16, 36.15% id in 213 aa, and the FT C-terminus of BF0302 is similar to the C-terminus of FT Bacteroides thetaiotaomicron endo-1,4-beta-xylanase D FT precursor BT3675 SWALL:AAO78780 (EMBL:AE016941) (333 aa) FT fasta scores: E(): 2.7e-15, 27.95% id in 347 aa" FT /db_xref="GOA:Q5LIF1" FT /db_xref="InterPro:IPR000421" FT /db_xref="InterPro:IPR005084" FT /db_xref="InterPro:IPR006584" FT /db_xref="InterPro:IPR006710" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR008985" FT /db_xref="InterPro:IPR013320" FT /db_xref="InterPro:IPR023296" FT /db_xref="UniProtKB/TrEMBL:Q5LIF1" FT /protein_id="CAH06075.1" FT /translation="MFINSLRKSPFSCSPGLILLGAFTLLSVPVYGQQIQQAERQVQQV FT PFLQFNFDEQGGETARNSGRGGSKYDARINGGTVEWGPGLQQGAARLSNKGHFKLPDGV FT LAHVKDFTLSVWVYLNEQSDNQTVCTFACGTDRYLILTTQRGNEENGVSLVMTKTQESG FT NHTDKEERIAYTRQKGKLSANAWHHLAFTLKGSVGTLYVDGVKAEIKTDFTVNPSLLGN FT TTDNYIGRPTWPDPYLNGGIDDFRLYDYALTDRQVYELASVADGRLVQEDRDGLSLGDL FT SAVTTDLVLPSSGKSGTTISWSSAQGQYISDSGKLYRPDAGTGNKKATLTATVRKGDVA FT LTKDFVLTVKDIGTEPEDVNVFSMQTGNPTVPAYLADASFYYDDRTKTFYAFGTNDGAG FT GENVYPAQMWYSKDCKEWKNEVIAFPKSWTDYAGTLCVWAPSIEYNPDTKKYYLMYSIA FT SNTFVGMADDLLGPWEDANGAAPGKMLFKGYDGQFFMDDDRTMYIVTDSWHFKIMKLKF FT DEAGKIYIDNSDPVFAKSDSNPFIGTYHYTQIEEIKNAFEASFIFKRNNLYYLMWSFNG FT SENYNVRYAVADKITGPYREINRSMTVPVLQRDDANRILGPGHHSMFCYGGRTFIAYHR FT QHYPFVDSKRQTCIDEVFFNEDGSIRPITPTHKGVTVAPDVPGDHRTNLALGKQTLTSS FT ARVYDDSEFAPRYRTHGISFCYAGNFAVDENYGTHWDPGVGAHKPWLIVDLGSECKVDE FT IETIFEFTSRTYKYKLEYLSQKEAGSLDAASGSHLWKVFADRSTDGVGQSPVTDTKPGN FT SPVKARFIRLTILEGVDIPLRADGLDKKNAENALSIFELKVFGEDRSDDLNRIFKAESF FT HNLYGIALEKNAAENGFIMGQIDNNDYLLYRNVDLGKGAGTFTAKVASGTEGGKIEVYL FT GSLKGKPIGVLEVGNTGGDQSWEIKSTSLERIARGRQEKLYLLFKGKTGTENLLKLDWF FT QFTKDRMK" FT misc_feature 355163..355258 FT /note="Signal peptide predicted for BF0302 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.965 between residues 32 and 33" FT misc_feature 357215..357670 FT /note="Pfam match to entry PF00754 F5_F8_type_C, F5/8 type FT C domain, score -43.0, E-value 0.0089" FT misc_feature 357761..358141 FT /note="Pfam match to entry PF03422 CBM_6, Carbohydrate FT binding module (family 6), score 104.4, E-value 1.9e-28" FT CDS 358188..359156 FT /transl_table=11 FT /locus_tag="BF9343_0297" FT /old_locus_tag="BF0303" FT /product="putative exported glycosylhydrolase" FT /note="Similar to Butyrivibrio fibrisolvens FT xylosidase/arabinosidase [includes: beta-xylosidase (EC FT 3.2.1.37) (1,4-beta-d-xylan xylohydrolase) (xylan FT 1,4-beta-xylosidase); alpha-l- arabinofuranosidase (EC FT 3.2.1.55) (arabinosidase)] XylB SWALL:XYLB_BUTFI FT (SWALL:P45982) (517 aa) fasta scores: E(): 9.2e-10, 29.41% FT id in 289 aa, and to Bacteroides thetaiotaomicron FT endo-1,4-beta-xylanase D precursor BT2898 SWALL:AAO78004 FT (EMBL:AE016938) (327 aa) fasta scores: E(): 6.6e-52, 49.24% FT id in 266 aa" FT /db_xref="GOA:Q5LIF0" FT /db_xref="InterPro:IPR006710" FT /db_xref="InterPro:IPR023296" FT /db_xref="UniProtKB/TrEMBL:Q5LIF0" FT /protein_id="CAH06076.1" FT /translation="MGKKKISTGVWLLGLLIVFCSYTGVAGAKNRSKTKTVTKSVPLGD FT PFILLHDGTYYAYGTHAADGIEVYTSKDLRKWKLHGLALHKDDVWADSRFWAPEIYEID FT GKFYMYYTADEHICVAIADSPLGPFRQNEKKPMVAGEKMIDSSLFIDEDGKPYLFFVRF FT NDGNNVWVAELEDDYMTIKTETMRPCIHVSQAWEEVWPRVNEGSYVLKHNGLYYMTYSG FT NSFESPFYGIGCATATDIMGEWTKYQENPILQKPGNLQGVGHSAMFKDKKGRLRIVYHA FT HKDKEHIHPRGMYIGKVYFEKVDGIDRMRINKEYIAAELVE" FT misc_feature 358188..358271 FT /note="Signal peptide predicted for BF0303 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.859 between residues 28 and 29" FT misc_feature 358380..358664 FT /note="Pfam match to entry PF04616 Glyco_hydro_43, Glycosyl FT hydrolases family 43, score 21.3, E-value 3.1e-06" FT CDS 359630..359923 FT /transl_table=11 FT /locus_tag="BF9343_0298" FT /old_locus_tag="BF0305" FT /product="putative exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIE9" FT /protein_id="CAH06077.1" FT /translation="MKKFVFIAAVLGFTNVFVAMTQQKNSPIPLHNNGIETFTVYEADG FT SNYCYNGGRGATSCSISGGIDIKGGGASAACDVSCQTGYYACCGIRCTCEKY" FT misc_feature 359630..359686 FT /note="Signal peptide predicted for BF0305 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.417 between residues 19 and 20" FT CDS 359929..360993 FT /transl_table=11 FT /locus_tag="BF9343_0299" FT /old_locus_tag="BF0306" FT /product="conserved hypothetical lipoprotein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0664 SWALL:AAO75771 (EMBL:AE016928) (382 aa) FT fasta scores: E(): 1.8e-05, 26.44% id in 276 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LIE8" FT /protein_id="CAH06078.1" FT /translation="MRKIVILSLGLLFFLFSCQREQKNVTQRIEVDLSHIDTVKISASR FT IINLETVDSSLLYDICALFKQDDRYFIWSRDNAYVFNDKGDFLFNISCKGQGPGEYLSF FT GCMFMEDGEVCIFDQDKQQILRFDINGKFMGVQKVLLDEDAPSPSMIIPIGTERYLSTN FT RFGGDYRKMPVLSFWNKDFSSQQIVKGRFMNDGIHFPDAFFVGEEGRRVLYWEPLKDTL FT FTVTDNFLVPEYKIDFGTYAIPEEEGAKDIYARIMYLNKPENQSCASVARFYQIDGYYI FT YFTFMWYDRVYLCRYSEKTKKSEIFAILTDEMQLKECSFFKILGDDIVIAFEDKGNLEK FT NPSLCVFNKKILDI" FT misc_feature 359929..359988 FT /note="Signal peptide predicted for BF0306 by SignalP 2.0 FT HMM (Signal peptide probability 0.990) with cleavage site FT probability 0.451 between residues 20 and 21" FT misc_feature 359950..359982 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 361079..361501 FT /transl_table=11 FT /locus_tag="BF9343_0300" FT /old_locus_tag="BF0307" FT /product="hypothetical protein" FT /note="Limited similarity to Bacteroides thetaiotaomicron FT endo-1,4-beta-xylanase D precursor BT2898 SWALL:AAO78004 FT (EMBL:AE016938) (327 aa) fasta scores: E(): 0.00028, 50% id FT in 48 aa" FT /db_xref="InterPro:IPR023296" FT /db_xref="UniProtKB/TrEMBL:Q5LIE7" FT /protein_id="CAH06079.1" FT /translation="MKIREILEDSLLIVRFSVYSCRDCLNFLISELDCSKKQSKIKMAM FT LIANIPVRDLHVKCKEFDNPRLYRVDSLSFDFDYSLTPYVFKHKELYYMAYSGNSFESP FT FYGVGCATATDIIGKWTKYDENLILQNPGAFAGCRV" FT CDS 361899..362135 FT /transl_table=11 FT /locus_tag="BF9343_0301" FT /old_locus_tag="BF0309" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIE6" FT /protein_id="CAH06080.1" FT /translation="MFHNREIILLLLFLVDKHRRLLSDFPKALYFCEKQTRVLLLSPLG FT VHCVVKTSGFLQYDKRKNEIETIFSTNPTNVLK" FT CDS 362322..363353 FT /transl_table=11 FT /locus_tag="BF9343_0302" FT /old_locus_tag="BF0310" FT /product="hypothetical lipoprotein" FT /note="Limited similarity to Bacteroides thetaiotaomicron FT hypothetical protein BT0659 SWALL:AAO75766 (EMBL:AE016928) FT (345 aa) fasta scores: E(): 0.066, 23.51% id in 336 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LIE5" FT /protein_id="CAH06081.1" FT /translation="MVKLLLICLATIVMISCGSEQEKLTVYIPDTCTDTLQYEIYLPEE FT EGLNIFYDLCVTDSFCAFLDTRNDTLLKIFTATIPPALVGLGMKGEGPDDFLFPFFEKS FT IGREGKGKLSFIELNSWNKKIVAIHSAASPAPVAVSVVEAQQLPEMPVVRDYNETDSCV FT YGIDVDMQHGLFFIYDKHTARVKTVDYHRDIRSGYPEGHLSYLYESCLMVNQDAKAACM FT GLLNLNSLCFYDLKGNLMKEIVIGKELKSPEYDPEFLDFPNAPKYFISLCGTPNYLYAL FT YNGFPGTSGKSKIMVFTWQGAPVAIYQTDVKLERIAVAPSGRYVLGLNITEEGGSDVLK FT FEL" FT misc_feature 362322..362387 FT /note="Signal peptide predicted for BF0310 by SignalP 2.0 FT HMM (Signal peptide probability 0.952) with cleavage site FT probability 0.324 between residues 22 and 23" FT misc_feature 362340..362372 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 363368..363499 FT /transl_table=11 FT /locus_tag="BF9343_0303" FT /old_locus_tag="BF0311" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIE4" FT /protein_id="CAH06082.1" FT /translation="MLKNILTNVLFGLSEVPVEQFMQSSNAFSEIGFFHNESCSEFT" FT CDS complement(363588..364742) FT /transl_table=11 FT /locus_tag="BF9343_0304" FT /old_locus_tag="BF0312" FT /product="putative transmembrane acyltransferase protein" FT /note="Similar to Agrobacterium tumefaciens protein 2 in FT PicA locus SWALL:PIC2_AGRTU (SWALL:P29113) (191 aa) fasta FT scores: E(): 4.4e-11, 35.75% id in 193 aa, and to FT Bacteroides thetaiotaomicron acyltransferase BT2367 FT SWALL:AAO77474 (EMBL:AE016935) (382 aa) fasta scores: E(): FT 2e-108, 67.27% id in 385 aa, and to Bradyrhizobium FT japonicum Blr2157 protein SWALL:BAC47422 (EMBL:AP005942) FT (405 aa) fasta scores: E(): 3.2e-21, 30.89% id in 369 aa" FT /db_xref="GOA:Q5LIE3" FT /db_xref="InterPro:IPR002656" FT /db_xref="UniProtKB/TrEMBL:Q5LIE3" FT /protein_id="CAH06083.1" FT /translation="MSNISSTVFADTKPHYHLLDGLRGVAALMVIWYHVFEGYAFAGGT FT TIDTFNHGYLAVDFFFILSGFVIGYAYDDRWGKNFTMKDFIKRRLIRLHPMVIMGAIVG FT AITFYIQGSVQWDGTHIGISMVMLSLLCTIFFIPAMPGVGYEVRGNGEMFPLNGPCWSL FT FFEYIGNILYALFIRRLSNKALTIVVVLLGVALASFAIFNVSGYGNIGVGWTLDGVNFI FT GGLLRMLFPFSMGMLLSRNFKPMKLRGAFWICTLVMIALFAVPYLEGTESICTNGIYEA FT FCIIIAFPILLWIGASGTTTDKKSTQICKFLGDISYPIYVIHYPFMYLFYAWLIKNQLF FT TLGETWQVALCVYAWNILFAYLCLKLYDEPVRKYLAKRFLNKKQ" FT misc_feature complement(363621..364703) FT /note="Pfam match to entry PF01757 Acyl_transf_3, FT Acyltransferase family, score 61.5, E-value 1.5e-15" FT misc_feature complement(order(363642..363710,363738..363797, FT 363855..363914,363942..363995,364029..364097, FT 364125..364193,364212..364271,364314..364382, FT 364401..364469,364527..364595,364614..364673)) FT /note="11 probable transmembrane helices predicted for FT BF0312 by TMHMM2.0 at aa 24-43, 50-72, 92-114, 121-143, FT 158-177, 184-206, 216-238, 250-267, 277-296, 316-335 and FT 345-367" FT CDS complement(364839..365402) FT /transl_table=11 FT /locus_tag="BF9343_0305" FT /old_locus_tag="BF0313" FT /product="putative cAMP-binding DNA-binding protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein, putative regulatory protein with a FT cAMP-binding domain BT1545 SWALL:Q8A7H9 (EMBL:AE016932) FT (187 aa) fasta scores: E(): 1.3e-30, 47.31% id in 186 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT2366 SWALL:Q8A576 (EMBL:AE016935) (187 aa) fasta FT scores: E(): 2.5e-26, 43.31% id in 187 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT1389 SWALL:Q8A7Y5 (EMBL:AE016931) (187 aa) fasta scores: FT E(): 1.4e-15, 31.52% id in 184 aa, and to Bacteroides FT thetaiotaomicron putative cAMP-binding domain, regulatory FT protein BT2102 SWALL:Q8A5Y4 (EMBL:AE016934) (187 aa) fasta FT scores: E(): 1e-12, 32.08% id in 187 aa" FT /db_xref="GOA:Q5LIE2" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018490" FT /db_xref="UniProtKB/TrEMBL:Q5LIE2" FT /protein_id="CAH06084.1" FT /translation="MKNIINKIRQLYPVSDEALQALQANMQVKYYPKDTYIVQSGITDR FT LVYFIEEGVTRSVFHHNGQDTTTWFSQEGDVTFGMDSLYYKQPSIESIETLSDCKIYVL FT HIDELNALYEKYIDIANWGRILHQDVNKELSHMFVERLQLSPKERYEQFNRRYPGLINR FT VKLKYVAAFLGISIYTLSRVRAKK" FT misc_feature complement(364848..364913) FT /note="Predicted helix-turn-helix motif with score FT 1141.000, SD 3.07 at aa 169-190, sequence FT VKLKYVAAFLGISIYTLSRVRA" FT misc_feature complement(365049..365330) FT /note="Pfam match to entry PF00027 cNMP_binding, Cyclic FT nucleotide-binding domain, score 31.3, E-value 1.9e-06" FT CDS 365705..367087 FT /transl_table=11 FT /locus_tag="BF9343_0306" FT /old_locus_tag="BF0314" FT /product="hypothetical exported protein" FT /note="no significant database matches" FT /db_xref="InterPro:IPR021533" FT /db_xref="UniProtKB/TrEMBL:Q5LIE1" FT /protein_id="CAH06085.1" FT /translation="MKSFYPVLYLCFLFGLLPFLGSCSEENESSGTIEMNQLPGTAQSF FT LSNYFPGQTPEKIERTNTDQENARLLYRVVFPNEVKVEFSENGGWKRLMIPDQKLPGSL FT DSLWGKIIEYVQQLFPDDPFIGIENACYGDCVLLSSGKKIAFYYDGTCIGYEMDIKDES FT GVPQPVRDFVATYFPDGVFQAVVEHIPNENVTAGYSFWLENGFKCVLNDRGQWTEVNGG FT TELLPVSILETLPAKVTEQLYRDYPAAQVTYIRLEGTCYTIQVSKTVYVTIDPESKPIV FT VPVMQAQALAEEYFGKLRSISISHPLHTDVLNFKVCLPNGFNMLVNEDASEWLNIDGNG FT FAFPEKLVASLPEKITEYISAHSNSEITRVDRSVAASFLVELTNGDGLMFDSQGGFLGK FT EKIELSISEKTYRYMRHQFPDDLNMYFSSYSIEGWIYKLGDGSQVRFDRDGNFVEMIAA FT AK" FT misc_feature 365705..365776 FT /note="Signal peptide predicted for BF0314 by SignalP 2.0 FT HMM (Signal peptide probability 0.808) with cleavage site FT probability 0.423 between residues 24 and 25" FT CDS complement(367248..368225) FT /transl_table=11 FT /locus_tag="BF9343_0307" FT /old_locus_tag="BF0315" FT /product="putative transcriptional regulator" FT /note="Similar to Bacteroides thetaiotaomicron putative FT transcriptional regulator BT2096 SWALL:AAO77203 FT (EMBL:AE016934) (325 aa) fasta scores: E(): 7.6e-90, 73.23% FT id in 325 aa, and to Bacteroides thetaiotaomicron sensor FT FucR or BT1272 SWALL:Q9RQ14 (EMBL:AF137263) (331 aa) fasta FT scores: E(): 7.8e-34, 33.95% id in 321 aa" FT /db_xref="GOA:Q5LIE0" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q5LIE0" FT /protein_id="CAH06086.1" FT /translation="MKRNESKYKQVVNHVIDGINNGSYKKGDWILSINEFRKNYNLSRD FT TVFAGLSELKSKGIIDSTPGVGYYIATTRIAQKLNIFLLFNEFNEFKEDLYNSFISSIR FT KTANVDLYFHNYNRKVFETLINEANYKYTTYILMPGKFTNIAPLLESLSGRVFLLDHFH FT PELAGKYSSVAQNFEKDTYEALVYGLPHLKKYDHIIMVQKEEKEPIERYNGLCAFCEEY FT HFTHEYTDSVRNREIRQGETFMVVNDRDLVDLLKQAQLQNFAPGKDFGIISYNDTPLKE FT ILAGGITTLSTDFKQMGQTMASLITQKEIKTIENPWKLDIRNSL" FT CDS 368437..370524 FT /transl_table=11 FT /locus_tag="BF9343_0308" FT /old_locus_tag="BF0316" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2097 SWALL:AAO77204 (EMBL:AE016934) FT (687 aa) fasta scores: E(): 1.6e-184, 61.93% id in 683 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT3674 SWALL:AAO78779 (EMBL:AE016941) (668 aa) FT fasta scores: E(): 1.1e-54, 35.89% id in 677 aa, and to FT Rhizobium loti hypothetical protein Mlr2247 SWALL:Q98IU3 FT (EMBL:AP002999) (662 aa) fasta scores: E(): 1.5e-34, 32.48% FT id in 711 aa" FT /db_xref="GOA:Q5LID9" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012341" FT /db_xref="InterPro:IPR012878" FT /db_xref="UniProtKB/TrEMBL:Q5LID9" FT /protein_id="CAH06087.1" FT /translation="MRTYRFMFPVLLAMTATGSLTAGPSDKGSSGIRFPEVNQVKIEDT FT FWKPKLNLWQKVTVNDVFDKFEGKHLEHPGEFCNTFENFDRVAKGERNIGRHAGAPWFD FT GLVYETIRGVADLMARQSDAALEKRVDGYIDRIAVAQASEPNGYIDTYTQLMEADHQWG FT ERGGMLRWQHDVYNAGMLVEAGVHYYNATGKTKLLEVATRCANLMAEYMGTFPKKNVVP FT AHSGPEEALVKLYTLYRDNPGLKKQINVPVVEREYLRLAEFWIEGRGKHCGFPLWGTWG FT NPAAEQWIRDRKYEAPEFGNHTRPSWGDYAQDSIPLFEQKTIEGHAVRATLFATGATAA FT ALENRSPEYIAAVSRLWDNMIGKRMFITGGVGAVHFDEKFGPDYFLPTDAYLETCAAVG FT AGFFSQRMNELTGDAKYMDELERTLYNNVLTGISLSGTQYTYQNPLNSAKHARWGWHDC FT PCCPPMFLKMMSAMPGFIYSQKGDDIYVNLFIGSETELSLSDQSRIRLTQKTGYPWDGS FT VVMTVEPEKEKTFLLKVRIPGWAQGVENPYDLYRSEVKSAVNLKVNGKSIAMKIFKGYA FT EIQRKWKKGDRVELTLPVQPRLVTANEAVADLQNKVAIAAGPFVYCLEGCDNEGVADLR FT LDTRAPLSMTFEKELLNGVNVIKGQALDKTGKKVSVSAIPYYALGNRQDKGYVVWMPAN FT K" FT misc_feature 368437..368502 FT /note="Signal peptide predicted for BF0316 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.836 between residues 22 and 23" FT CDS 370526..372952 FT /transl_table=11 FT /locus_tag="BF9343_0309" FT /old_locus_tag="BF0317" FT /product="putative exported carbohydrate-binding protein" FT /note="C-terminus is similar to Bacteroides ovatus FT arabinosidase AsdI SWALL:Q59218 (EMBL:U15178) (660 aa) FT fasta scores: E(): 2.5e-08, 24% id in 575 aa, and the FT C-terminus is similar to Aspergillus niger FT alpha-L-arabinofuranosidase A precursor AbfA FT SWALL:ABFA_ASPNG (SWALL:P42254) (628 aa) fasta scores: E(): FT 1.2e-07, 24.37% id in 599 aa, and the C-terminus is similar FT to Bacteroides thetaiotaomicron alpha-L-arabinofuranosidase FT A precursor BT0368 SWALL:AAO75475 (EMBL:AE016927) (660 aa) FT fasta scores: E(): 1.2e-07, 25.04% id in 575 aa" FT /db_xref="GOA:Q5LID8" FT /db_xref="InterPro:IPR003305" FT /db_xref="InterPro:IPR010496" FT /db_xref="InterPro:IPR010720" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LID8" FT /protein_id="CAH06088.1" FT /translation="MNEHKHNYNMKINCLLALALSASSLAAQDAVIRVDAGKVENKITP FT YLYGACMEDVNHEIYGGLYDQKIFGESFEEPVSMDNFIGFTRCEGVWKLQDGQLSVQAH FT PGAKLVYDDTQLSDGTVGVDLKFTNGTSSSNNAGLLLRVGEYGGGADNFDGYEVSLFAD FT GKRLLLGKHLHNWQELKTTPVDVDPMQWNRMEVKLDGDELVILLNDCEVLRFEDRDTGL FT RNGKVAFRNWGADVSYRSLTIGSNTPVKLLTKATPQVSGMWDAFADLTAAAVYKQIADK FT PFHGRYAQEIEYLVGTGKVGIANRSLNRWGISVRQGEKKTGSLYLKGKAEVRVALQSVD FT GEKEYAVQCIRANAGDWKKYTFELTPDKTDENARLAIYLEEKGRIQVDMVTLMNGADRQ FT FCGLPLRNDIGQAMVDQGLRFLRYGGTMVNAPEYRFKKMIGDRAERPPYKGHWYTYSTN FT GFGIEDFLHFCEKAGFMPAYAVNVEESAQDMADMIEYLNGSVDTKWGKKRAENGHPEPY FT GLKYLEIGNEEVIWGDIEADYQHYIDRFNDIYEAVHAKDPEVQFIHSAWWRPESPNMEK FT VFKALDGKAAYWDYHPWTDDLGSHVNIDRELTDMKAKFLKWNPKTSMRCAIFEENGNLH FT NVQRAIVHATVQNVVRRHGDFILTTCAANALQPYLQNDNGWDQGQIFFTSGQVWGMPTF FT YAQQMSSAHHHPLRLWSETVGELDMTATTNEARDEVILHVVNTSSEVRETQVSLSGFIP FT KGNMEIYTLSGELNDENLPDTPTWILPKATWKQAPGSDFTYSFPGYSYTIVVLKK" FT misc_feature 370526..370606 FT /note="Signal peptide predicted for BF0317 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.521 between residues 27 and 28" FT misc_feature 371543..371710 FT /note="Pfam match to entry PF02018 CBM_4_9, Carbohydrate FT binding domain, score 21.5, E-value 2.3e-06" FT CDS 372962..375601 FT /transl_table=11 FT /locus_tag="BF9343_0310" FT /old_locus_tag="BF0318" FT /product="putative exported rhamnosidase protein" FT /note="Similar to Bacillus sp. GL1 rhamnosidase A RhaA FT SWALL:Q93RE8 (EMBL:AB046705) (886 aa) fasta scores: E(): FT 1.1e-63, 32.91% id in 878 aa, and to Bacteroides FT thetaiotaomicron alpha-rhamnosidase BT2524 SWALL:AAO77631 FT (EMBL:AE016936) (881 aa) fasta scores: E(): 2.4e-140, FT 38.77% id in 882 aa, and to Streptomyces coelicolor FT hypothetical protein SCO0488 or SCF34.07 SWALL:Q9RK18 FT (EMBL:AL939105) (1138 aa) fasta scores: E(): 4.3e-84, FT 34.05% id in 781 aa" FT /db_xref="GOA:Q5LID7" FT /db_xref="InterPro:IPR008902" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR013737" FT /db_xref="InterPro:IPR016007" FT /db_xref="UniProtKB/TrEMBL:Q5LID7" FT /protein_id="CAH06089.1" FT /translation="MKIGYLKPGILLLVLLFSFRQDLFAKKRITSLKCEYIEAPLGLDV FT QRPRLMWKVDTSDVPSRQTAYRILVSSTPELLRQGEADIWDSGKQKSDEQLVSYAGSTL FT RPHTRYWWRVEVWLNNKKVVSEPMWFETGKFSATDWEASWITDGYDKDYEPSPMFRKVF FT DVSKEVASARCYISGLGYYRLSFNGKAVNDHALDPGFTDYSKRVLYLTYDISGLLRHGK FT NCIGVQLGNGWFNEQTPAVWHFHEAPWRKRPQMIAEIHLCYTDGSKDIITTDTSWKTST FT GPLLFDNLYVGSFYDARLEQKGWDTELFDDVSWQHAKLTAAPAPLIEAQKMPSITTADT FT LSVVSVNCISDTCYVFDMGINTAGVPRLEIKGERGTRIRLRHSEMLQKDGNIDQRNIDM FT HLRPRNKREIIQTDEYVLKGEGVETFIPPFTYHGFRYIELTSDRPLTVADVKLQTLRMH FT SDVAEVGSFKCSDQLLNTIFNICRNSYLSNLFGIPTDCPTREKNGWMADGFMVQEAGMF FT NYDSRNVYAKWVKDMIDTQEANGNVAGIAPTSRRWDSNWAGPLWDAAIFIVPSYLYRYT FT GDIETMRQVYPAAERYLKYIETTEDERGLINHGLGDWLFYKAETPVDFMATGFVYWDNL FT MMAQMAELTGRVEDRQKYLAKAEELKKRINDHFFDSQTVSYANKTQLSYALPLYLHIVP FT EAYRERLAENLHKIIAANDYSLDFGFIGSVMVPDVLAETGYAETAYRMLTKTTLPSWGY FT WIKETGATSLYETWDVTRRIGDASLNHPSMGAVSAWMYKYPAGIRLSPDAPAFKKILIQ FT PCFLSDLDFVEASHESMYGTIRVDWRREEGKIRLHLVLPSTAMATVVLPGQKPKAVKGG FT EHIFVIPE" FT misc_feature 372962..373021 FT /note="Signal peptide predicted for BF0318 by SignalP 2.0 FT HMM (Signal peptide probability 0.633) with cleavage site FT probability 0.403 between residues 20 and 21" FT CDS complement(375781..376842) FT /transl_table=11 FT /locus_tag="BF9343_0311" FT /old_locus_tag="BF0319" FT /product="putative peptidase/deacetylase" FT /note="Similar to Escherichia coli acetylornithine FT deacetylase ArgE or B3957 SWALL:ARGE_ECOLI (SWALL:P23908) FT (383 aa) fasta scores: E(): 5e-10, 25.2% id in 373 aa, and FT to Bacteroides thetaiotaomicron acetylornithine deacetylase FT BT3549 SWALL:AAO78655 (EMBL:AE016941) (355 aa) fasta FT scores: E(): 2.2e-126, 86.81% id in 349 aa, and to FT Mycobacterium tuberculosis DapE or Rv1202 or MTCI364.14 or FT mt1240 SWALL:O05303 (EMBL:Z93777) (354 aa) fasta scores: FT E(): 1.1e-17, 27.64% id in 369 aa" FT /db_xref="GOA:Q5LID6" FT /db_xref="InterPro:IPR001261" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q5LID6" FT /protein_id="CAH06090.1" FT /translation="MIDESITSEAVGLLKSLISIPSLSREEEKAADYLQNYIEAEGMTT FT GRKGNNIWCLSPMFDLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAG FT ASVVTLLQVFLQLCRKQQSYNLIYLASCEEEVSGKGGIESVLPGLPPISFAVVGEPTEM FT QPAIAEKGLMVLDVTATGKAGHAARNEGDNAIYKVLDDIAWFRDYRFAKESPLLGPVKM FT SVTVINAGTQHNVIPDRCSFVVDVRSNELYSNEELFTEIQKHISCKAEARSFRLNSSRI FT EESHPFVQKAKKLGRVPFGSPTLSDQALMVFPSVKIGPGRSSRSHTADEYIMIKEIEEA FT LELYLKILDGLEI" FT misc_feature complement(375784..376803) FT /note="Pfam match to entry PF01546 Peptidase_M20, Peptidase FT family M20/M25/M40, score 181.8, E-value 9.7e-52" FT misc_feature complement(376618..376647) FT /note="PS00758 ArgE / dapE / ACY1 / CPG2 / YscS family FT signature 1." FT CDS 377031..378836 FT /transl_table=11 FT /locus_tag="BF9343_0312" FT /old_locus_tag="BF0320" FT /product="putative AMP binding long chain acyl-CoA FT synthetase" FT /EC_number="6.2.1.3" FT /note="Similar to Arabidopsis thaliana long chain acyl-CoA FT synthetase 7 LacS7 SWALL:Q8LKS5 (EMBL:AF503757) (700 aa) FT fasta scores: E(): 7.3e-40, 29.12% id in 625 aa, and to FT Bacteroides thetaiotaomicron putative FT long-chain-fatty-acid--CoA ligase BT3550 SWALL:AAO78656 FT (EMBL:AE016941) (601 aa) fasta scores: E(): 2.6e-207, FT 87.52% id in 601 aa, and to Vibrio parahaemolyticus FT putative long-chain-fatty-acid-CoA ligase VP0351 FT SWALL:BAC58614 (EMBL:AP005074) (602 aa) fasta scores: E(): FT 2.7e-91, 41.3% id in 598 aa, and to Vibrio cholerae FT long-chain-fatty-acid--CoA ligase, putative VC2484 FT SWALL:Q9KP89 (EMBL:AE004318) (601 aa) fasta scores: E(): FT 3.5e-91, 41.09% id in 601 aa" FT /db_xref="GOA:Q5LID5" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020459" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:Q5LID5" FT /protein_id="CAH06091.1" FT /translation="MTYHHLSVLVHRQAEKYGDKTALKYRDYEKAQWIPISWNEFSQTV FT RQAANAMVELGVQEEENIGIFSQNKPECLFTDFAAFANRAVTIPLYATSSPAQAQYIIN FT DAQIRFLFVGEQFQYDAAFSVFGFCPSLVQLIIFDPAVVKDPRDMSSIYYDEFLAKGKD FT LPHNEVVEERTARASAEDLANILYTSGTTGEPKGVMLHHSCYLEAFRIHDIRLVDMTDK FT DVSMNFLPLTHVFEKAWTYLCVHKGVQVCINLRPADIQTTIKEIRPTLMCSVPRFWEKV FT YAGVQEKIAETTGIKKMLMLDAIKVGRIHNLDYLRVGKTPPRMIQLKYKFYEKTIYALL FT KKTIGIENGNFFPTAGAAVPDEICEFVHSVGIDMLVGYGLTESTATVSCTSKTGYDIGS FT VGQVMPEVEVKIGEDNEILLRGKTITKGYYKKAEATAAAIDEEGWFHTGDAGYFKNGQL FT YLTERIKDLFKTSNGKYIAPQALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKQ FT YAKEKGIEYKDMAELLEHPKITALFRARIDTLQQQFAHYEQIKRFTLLPEPFSMEKGEL FT TNTLKLKRPVVARNYKEVIDKMYEE" FT misc_feature 377139..378518 FT /note="Pfam match to entry PF00501 AMP-binding, AMP-binding FT enzyme, score 236.0, E-value 4.5e-68" FT misc_feature 377583..377618 FT /note="PS00455 Putative AMP-binding domain signature." FT CDS 379054..380013 FT /transl_table=11 FT /locus_tag="BF9343_0313" FT /old_locus_tag="BF0321" FT /product="putative peptide chain release factor" FT /note="Similar to Escherichia coli peptide chain release FT factor 2 PrfB or SupK or B2891 SWALL:RF2_ECOLI FT (SWALL:P07012) (365 aa) fasta scores: E(): 2.4e-45, 46.6% FT id in 309 aa, and to Bacteroides thetaiotaomicron peptide FT chain release factor Rf-2 BT3552 SWALL:AAO78658 FT (EMBL:AE016941) (319 aa) fasta scores: E(): 1.7e-112, FT 93.41% id in 319 aa, and to Lactococcus lactis peptide FT chain release factor 2 PrfB or ll0971 SWALL:RF2_LACLA FT (SWALL:Q9CGX1) (365 aa) fasta scores: E(): 2.4e-45, 45.45% FT id in 308 aa. CDS is truncated at the N-terminus" FT /db_xref="GOA:Q5LID4" FT /db_xref="InterPro:IPR000352" FT /db_xref="InterPro:IPR005139" FT /db_xref="UniProtKB/TrEMBL:Q5LID4" FT /protein_id="CAH06092.1" FT /translation="MKLVKGLQKWIEGYNDVKTLTDELELAFDFYKDELVTEQEVDEAY FT AKALEHVENLELQNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYK FT ATMANLQEGDEAGIKTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVF FT VTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILI FT ENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDDR FT RVKDHRTNFQTSDVNGVMDGKIEGFIKAYLMEFSSEEA" FT misc_feature 379126..379464 FT /note="Pfam match to entry PF03462 PCRF, PCRF domain, score FT 132.0, E-value 9.6e-37" FT misc_feature 379552..379914 FT /note="Pfam match to entry PF00472 RF-1, Peptidyl-tRNA FT hydrolase domain, score 134.6, E-value 1.6e-37" FT CDS 380166..380300 FT /transl_table=11 FT /locus_tag="BF9343_0314" FT /old_locus_tag="BF0322" FT /product="hypothetical membrane protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LID3" FT /protein_id="CAH06093.1" FT /translation="MSKNKKKVTHSKKEEEQAKKVVKIVFVSLVILALAMIIGFSLLG" FT misc_feature 380226..380294 FT /note="1 probable transmembrane helix predicted for BF0322 FT by TMHMM2.0 at aa 21-43" FT CDS 380417..381736 FT /transl_table=11 FT /locus_tag="BF9343_0315" FT /old_locus_tag="BF0323" FT /product="conserved hypothetical protein" FT /note="Similar to Caulobacter crescentus hypothetical FT protein CC0911 SWALL:Y911_CAUCR (SWALL:P33976) (493 aa) FT fasta scores: E(): 1.9e-17, 27.19% id in 364 aa, and to FT Xanthomonas axonopodis polyphosphate-selective porin O OprO FT or XAC3472 SWALL:Q8PGZ0 (EMBL:AE011995) (390 aa) fasta FT scores: E(): 1.6e-12, 27.96% id in 354 aa, and to Xylella FT fastidiosa polyphosphate-selective porin O OprO or PD0270 FT SWALL:AAO28156 (EMBL:AE012554) (389 aa) fasta scores: E(): FT 2.9e-12, 26.46% id in 359 aa" FT /db_xref="InterPro:IPR010870" FT /db_xref="UniProtKB/TrEMBL:Q5LID2" FT /protein_id="CAH06094.1" FT /translation="MNKQLITIFSIFSITCLGMVSAQESKSFLPEVKKESLTFSSEDNK FT FKLTFNGRIQADGAMFFGEDYQPIGNGVGFRRVRLGATAAFGKRLSGKIEMDLTDGGFS FT LKDCFIKYAFPNGLYFRAGNFKESFGMAAMTSSGDLWFMEKANVVSAFAPEYHIGVQGT FT WEHDQFLGVAGVHFKKIEGNKEKDYSESNNKAGEDEGISVTARAVWQPVSADKVKGLHL FT GIAASYRTPKTTVGSLMPNTVRYSTRSLSYINKIKFLDTSPIASVSHDWLAGAELAGFY FT RGFRFQGEYIMNNTVRMEGLATEKFNGFYVQAAYLLFGGQQRYSKSRGAFSQPSFGRSW FT GDIELAARFDRIDLNGTEVMGGSSNGWTFGVNYYATRNLKFQLNYSYVDNDKYANAFGQ FT AAVGYKSNGEIAYKPEEVDESLGKGGNAYGILGLRIQLNF" FT CDS 381744..382214 FT /transl_table=11 FT /locus_tag="BF9343_0316" FT /old_locus_tag="BF0324" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3554 SWALL:AAO78660 (EMBL:AE016941) FT (155 aa) fasta scores: E(): 4e-51, 86.45% id in 155 aa, and FT to Anabaena sp. hypothetical protein ALL4694 SWALL:Q8YN76 FT (EMBL:AP003597) (153 aa) fasta scores: E(): 7.3e-22, 48.07% FT id in 156 aa, and to Xylella fastidiosa hypothetical FT protein Xf2357 SWALL:Q9PAY8 (EMBL:AE004045) (165 aa) fasta FT scores: E(): 1.8e-20, 46.62% id in 163 aa" FT /db_xref="GOA:Q5LID1" FT /db_xref="InterPro:IPR008172" FT /db_xref="InterPro:IPR012042" FT /db_xref="InterPro:IPR023577" FT /db_xref="UniProtKB/TrEMBL:Q5LID1" FT /protein_id="CAH06095.1" FT /translation="MSQEIERKFLVSGDYKSQAFDQSRIVQGYISSARGRTVRVRIRDG FT KGYLTIKGASDASGISRYEWEKELSLAEAEELMKLCEPGVIDKTRYLVRSGKHIFEVDE FT FYGENEGLVVAEVELGSEDEVFVKPGFIGEEVTGDIRYYNSQLMKKPYTTWL" FT misc_feature 381747..382190 FT /note="Pfam match to entry PF01928 CYTH, CYTH domain, score FT 57.3, E-value 2.9e-14" FT CDS 382271..383566 FT /transl_table=11 FT /locus_tag="BF9343_0317" FT /old_locus_tag="BF0325" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3555 SWALL:AAO78661 (EMBL:AE016941) FT (430 aa) fasta scores: E(): 1.9e-145, 86.04% id in 430 aa, FT and to Vibrio parahaemolyticus hypothetical protein vp2084 FT SWALL:BAC60347 (EMBL:AP005080) (424 aa) fasta scores: E(): FT 4.3e-27, 27.08% id in 432 aa, and to Vibrio vulnificus FT predicted membrane protein VV20031 SWALL:Q8D7W5 FT (EMBL:AE016808) (423 aa) fasta scores: E(): 7.4e-24, 25.72% FT id in 381 aa" FT /db_xref="GOA:Q5LID0" FT /db_xref="UniProtKB/TrEMBL:Q5LID0" FT /protein_id="CAH06096.1" FT /translation="MEQLYNYLPEKLVTFILVTLFSLLIGLSQRKISLKREGETTLFGT FT DRTFTFIGMLGYLLYILDPEEMHLFMGGGLILGILLGLNYYVKQSQFHVFGVTTIIIAL FT ITYCIAPIVSTQPSWFYVMVIVTVLLLTELKHTFTEIAQRMKNDEMITLAKFLAISGII FT LPMLPNENIIPDINLTPYTIWLATVVVSGISYLSYLLKRYVFRESGVLVSGIIGGLYSS FT TATISVLARKSRNAHSQEASEYVAAMLLAVSMMFLRFMILILIFSSTIFTSIYPYLLIM FT AAVAAGVAWFIHTRRKRTPDADLVEEEDDSSNPLEFKVALIFAGLFVIFTVLTHYTLIY FT AGTGGLNLLSFVSGFSDITPFILNLLQGTGSVAATVVMACTMQAIISNIVVNMCYALFF FT SGKQSKLRSWILGGFGCVIAANVVVLFFFYLI" FT misc_feature order(382283..382351,382388..382456,382469..382531, FT 382544..382612,382625..382684,382721..382774, FT 382802..382870,382889..382957,383000..383068, FT 383087..383146,383225..383293,383312..383380, FT 383390..383458,383492..383560) FT /note="14 probable transmembrane helices predicted for FT BF0325 by TMHMM2.0 at aa 5-27, 40-62, 67-87, 92-114, FT 119-138, 151-168, 178-200, 207-229, 244-266, 273-292, FT 319-341, 348-370, 374-396 and 408-430" FT CDS 383737..386313 FT /transl_table=11 FT /locus_tag="BF9343_0318" FT /old_locus_tag="BF0326" FT /product="putative TonB-dependent receptor exported FT protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT TonB-dependent receptor BT3565 SWALL:AAO78671 FT (EMBL:AE016941) (853 aa) fasta scores: E(): 0, 72% id in FT 861 aa, and to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4568 SWALL:AAO79673 (EMBL:AE016945) FT (811 aa) fasta scores: E(): 4.9e-25, 23.22% id in 775 aa, FT and to Cytophaga johnsonae hypothetical 65.5 kDa protein FT SWALL:O30490 (EMBL:AF007381) (578 aa) fasta scores: E(): FT 1.1e-17, 24.5% id in 551 aa" FT /db_xref="GOA:Q5LIC9" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="UniProtKB/TrEMBL:Q5LIC9" FT /protein_id="CAH06097.1" FT /translation="MRNKLLLLLLLMFMTSGMMYAQQQKTQQSQQRTAAPSYTLKGVLL FT DSLTQEGEPYATIKIAKKNAPQKALKMAVTDLNGKFQEKLTVAPGEYIITLSSVGKVTI FT VKDFTVKASEKVIDLGKLNMAEATNELKGIEVVAQKPLVKVDVDKIEYNIEDDPDSKTN FT TVMEMLRKVPLVTVDGEDNIKVNGSSSFKIHVNGKPNNMMSNNPKDVLKSMPANTIKHI FT EVITSPGAKYDAEGVGGILNIVTVGGGFEGYTATFRASGSNRGAGAGGYATIKSGKLTI FT TGNYNYNYDTSPKSYSDSYRENYDSEDQKYLESKSSSDYNGSFQYGNLEASYEIDTLRL FT LTASFGMYGGANDNKSDGLTTMWNAQRDRLAYQYRSLSDGDGSWYSMRGNVDYQRTSKK FT NKDRMITLSYKISTQPQNSDYYTDYKDIKDPFEMDIVKKFLLNNSHSDGKTNTTEHTFQ FT VDYTTPIGKLHTIEAGAKYIIRNNLSDNKLFEAEGVSDNYEYNNDRSSKYKHLNDILAA FT YLGYTLRYKTFSFKPGVRYEYTSQDVKYLAGAIGPEADFSTSYNDFVPSVTMGIKIGKT FT QNLRGGYNMRIWRPGIWNLNPYFDDRNPMFISQGNSNLESEKSHSFNLSYSMFSMKFNV FT NISLRHSFGNNGIERVSRLIGKGGEEFPGGHHAPEGALYSTYENIGKNRNTGLSLYGNW FT NASPNTRIYLNGDGSYVDIKSPAQGLHNYGWNASLYGGIQHTFPLKIRASLNAGGSTPY FT ISLQGKGSGYYYYSLGVNRSFIKDRFTVSAYVSNIFEKYRSYNNTTMGENFLSKSSSRY FT QSRSFGISLSYRIGELKASVKKAARSINNDDVKGGGGQGGQGGGAN" FT misc_feature 383737..383805 FT /note="Signal peptide predicted for BF0326 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.872 between residues 23 and 24" FT misc_feature 384151..386211 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -4.6, E-value 0.00023" FT CDS complement(386594..387814) FT /transl_table=11 FT /locus_tag="BF9343_0319" FT /old_locus_tag="BF0327" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2916 SWALL:AAO78022 (EMBL:AE016938) FT (407 aa) fasta scores: E(): 4.1e-84, 50.97% id in 410 aa, FT and to Thermotoga maritima hypothetical protein Tm1061 FT SWALL:Q9X0F1 (EMBL:AE001766) (387 aa) fasta scores: E(): FT 6.1e-69, 46.89% id in 386 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT3021 FT SWALL:AAO78127 (EMBL:AE016938) (450 aa) fasta scores: E(): FT 4.5e-64, 42.82% id in 418 aa" FT /db_xref="InterPro:IPR016624" FT /db_xref="UniProtKB/TrEMBL:Q5LIC8" FT /protein_id="CAH06098.1" FT /translation="MKRIILSIVWGLLTGWAAVPCLWAQSRTGTADREIWVKTLVRLAD FT PVLSNLANETLKKEMPYESLAPNRQRFSYLEAVGRTVCGIAPWLELGEDDTPEGQLRKK FT YIELTVKGISNAVNPSSPDYLIFGEPSQPLVDAAFLAEGLLRAPKQLWGNLSPAARKQV FT VTELKRSRVIKPNESNWLLFASIVEAALQEFTGECDTTRLNYGVRKFRDLWYKGDAQYG FT DGAEFHLDYYNSFVIHPMLTDVLVVMQKHRMPESEFLNVQQKRLGRYAEQLERFISPEG FT TYPVIGRSIVYRTGVFHALGQAALLHLLPQQIVPAQVRCGMTKVIENQFRSAANFDTKG FT WLKIGFSGNQVQMSESYINTGSTYLCLTGFLPLGLPADDPFWSAPPAEWTNLKAWSGKE FT MPADHSL" FT misc_feature complement(387743..387814) FT /note="Signal peptide predicted for BF0327 by SignalP 2.0 FT HMM (Signal peptide probability 0.982) with cleavage site FT probability 0.837 between residues 24 and 25" FT CDS complement(387814..389901) FT /transl_table=11 FT /locus_tag="BF9343_0320" FT /old_locus_tag="BF0328" FT /product="putative beta-galactosidase" FT /note="Similar to Thermoanaerobacter mathranii FT beta-galactosidase Lac SWALL:Q93IM1 (EMBL:AJ316558) (751 FT aa) fasta scores: E(): 5.2e-31, 26.92% id in 702 aa, and to FT Bacteroides thetaiotaomicron beta-galactosidase BT0757 FT SWALL:AAO75864 (EMBL:AE016929) (682 aa) fasta scores: E(): FT 2.2e-207, 72.25% id in 656 aa, and to Bacteroides FT thetaiotaomicron beta-galactosidase BT2969 SWALL:AAO78075 FT (EMBL:AE016938) (702 aa) fasta scores: E(): 1.7e-81, 37.62% FT id in 699 aa" FT /db_xref="GOA:Q5LIC7" FT /db_xref="InterPro:IPR006101" FT /db_xref="InterPro:IPR006102" FT /db_xref="InterPro:IPR006103" FT /db_xref="InterPro:IPR006104" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013812" FT /db_xref="InterPro:IPR017853" FT /db_xref="PDB:3CMG" FT /db_xref="UniProtKB/TrEMBL:Q5LIC7" FT /protein_id="CAH06099.1" FT /translation="MKQQKCNYFPSLWWRGREKGLSTFLFLLLFSISLHAQRQDILLNN FT NWNFRFSHQVQGDTRRVDLPHTWNAQDALAGKIDYKRGIGNYEKALYIRPEWKGKRLFL FT RFDGVNSIADVFINRKHIGEHRGGYGAFIFEITDLVKYGEKNSVLVRANNGEQLDIMPL FT VGDFNFYGGIYRDVHLLITDETCISPLDYASPGVYLVQEVVSPQEAKVCAKVNLSNRAA FT DGTAELQVLVTDGTKVICKESRNVSLKQGADILEQLPLLIQKPRLWNGCEDPFMYQVSI FT SLHKDGKQIDSVTQPLGLRYYHTDPDKGFFLNGKHLPLHGVCRHQDRAEVGNALRPQHH FT EEDVALMREMGVNAIRLAHYPQATYMYDLMDKHGIVTWAEIPFVGPGGYADKGFVDQAS FT FRENGKQQLIELIRQHYNHPSICFWGLFNELKEVGDNPVEYVKELNALAKQEDPTRPTT FT SASNQDGNLNFITENIAWNRYDGWYGSTPKTLATFLDRTHKKHPELRIGISEYGAGASI FT YHQQDSLKQPSASGWWHPENWQTYYHMENWKIIAERPFVWGTFVWNMFDFGAAHRTEGD FT RPGINDKGLVTFDRKVRKDAFYFYKANWNKQEPMIYLAEKRCRLRYQPEQTFMAFTTAP FT EAELFVNGVSCGKQKADTYSTVVWKNVKLTSGENIIRVTTPGKKPLTDEVTVEYKEDRP FT L" FT misc_feature complement(388078..388983) FT /note="Pfam match to entry PF02836 Glyco_hydro_2_C, FT Glycosyl hydrolases family 2, TIM barrel domain, score FT 42.5, E-value 7.1e-15" FT misc_feature complement(389002..389313) FT /note="Pfam match to entry PF00703 Glyco_hydro_2, Glycosyl FT hydrolases family 2, immunoglobulin-like beta-sandwich FT domain, score 3.5, E-value 0.0015" FT misc_feature complement(389353..389832) FT /note="Pfam match to entry PF02837 Glyco_hydro_2_N, FT Glycosyl hydrolases family 2, sugar binding domain, score FT 14.2, E-value 6.5e-09" FT CDS complement(389958..391493) FT /transl_table=11 FT /locus_tag="BF9343_0321" FT /old_locus_tag="BF0329" FT /product="putative exported beta-hexosaminidase" FT /note="Similar to Porphyromonas gingivalis FT beta-hexosaminidase precursor NahA SWALL:HEXA_PORGI FT (SWALL:P49008) (777 aa) fasta scores: E(): 1.1e-50, 36.4% FT id in 467 aa, and to Bacteroides thetaiotaomicron FT beta-hexosaminidase precursor BT3598 SWALL:AAO78703 FT (EMBL:AE016941) (537 aa) fasta scores: E(): 8e-90, 49.53% FT id in 428 aa, and to Bacteroides forsythus HexA FT SWALL:AAO33832 (EMBL:AY184490) (782 aa) fasta scores: E(): FT 4.6e-53, 39.05% id in 443 aa" FT /db_xref="GOA:Q5LIC6" FT /db_xref="InterPro:IPR001540" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR015882" FT /db_xref="InterPro:IPR015883" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LIC6" FT /protein_id="CAH06100.1" FT /translation="MKRTNRTLFIHNTARGRIKFLLLALFAFQGLQAQKLFPAPSAIET FT HKGTFSYDEVSAKCVRTTISKSLPAIGIEYSDEAYQLEITPDSIFIDATSAKGAFYARQ FT AIKQLARHERGKIRCCRIYSSPRYAWRGFMLDESRHFFGKEKVKQYLDLMALLHLNVFH FT WHLTDEPGWRIEIKKYPKLTEIGAVGNWHDAQAAPQFYTQDDIREIVAYAAERQIMVVP FT EFDMPGHATAVCRAYPEVSGGGEGRWKHFTFHPCKEETYRFISDVLDEIVALFPAPYIH FT IGGDEVHYGNQNWFTDPEIQNFIKEKGLINETGLEHYFIRRAADLVAAKGKKMIGWDEI FT VDAGISPSKALVMWWRHDRKYQLLKALEQGYQVVLTPRRPLYGDFVQDASHKVGRYWDG FT FNPLQDIYAFPEPISHLFKGYEDQILGMQFTLWTERIADGKRLDFMTFPRLIALAESAW FT TSPKEKDWSRFCMRLPSFLEYLKEQGIYYFDVIHPQETPEPGGPEKADVLQNG" FT misc_feature complement(390108..391112) FT /note="Pfam match to entry PF00728 Glyco_hydro_20, Glycosyl FT hydrolase family 20, catalytic domain, score 238.6, E-value FT 7.4e-69" FT misc_feature complement(391116..391478) FT /note="Pfam match to entry PF02838 Glyco_hydro_20b, FT Glycosyl hydrolase family 20, domain 2, score 3.1, E-value FT 0.00025" FT misc_feature complement(391395..391493) FT /note="Signal peptide predicted for BF0329 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.788 between residues 33 and 34" FT CDS complement(391524..392435) FT /transl_table=11 FT /locus_tag="BF9343_0322" FT /old_locus_tag="BF0330" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3023 SWALL:AAO78129 (EMBL:AE016938) FT (305 aa) fasta scores: E(): 2.5e-76, 64.59% id in 305 aa, FT and to Pseudomonas putida hypothetical protein PP0968 FT SWALL:AAN66593 (EMBL:AE016777) (413 aa) fasta scores: E(): FT 9.1e-11, 25.15% id in 318 aa, and to Lactobacillus FT plantarum cell surface protein precursor LP_3001 FT SWALL:CAD65183 (EMBL:AL935260) (1074 aa) fasta scores: E(): FT 3e-07, 22.5% id in 240 aa" FT /db_xref="GOA:Q5LIC5" FT /db_xref="InterPro:IPR002591" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:Q5LIC5" FT /protein_id="CAH06101.1" FT /translation="MKTQLFKFACLIICLLTIAPNCHAGSKWKAKHVVLIGLDGWGAYS FT VEKANIPHIKQLMNDGSYTLTKRSVLPSSSAVNWASMFMGAGPELHGYTTWNSSTPDLP FT SKELSKNGIFPTIFQLLREADPKAEIGTFYEWVGIKYLVDTLAVNKYNQGINYEKYPTE FT LCEKAVKYIKEKKPTLTLIAWDNPDHVGHKEGHDTPAYYHKLEEIDGYIGKVMNAVKEA FT GILDETIFIITSDHGGINKGHGGKTMQEMETPFIISGKNIKKGHEIQASMMQFDVAATV FT AAIFKLKQPQVWIGRPIMEVFK" FT misc_feature complement(391725..391919) FT /note="Pfam match to entry PF01663 Phosphodiest, Type I FT phosphodiesterase / nucleotide pyrophosphatase, score 21.4, FT E-value 3.3e-06" FT misc_feature complement(392364..392435) FT /note="Signal peptide predicted for BF0330 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 1.000 between residues 24 and 25" FT CDS complement(392456..393667) FT /transl_table=11 FT /locus_tag="BF9343_0323" FT /old_locus_tag="BF0331" FT /product="putative exported hydrolase" FT /note="Similar to Bacillus sp. GL1 unsaturated glucuronyl FT hydrolase Ugl SWALL:Q9RC92 (EMBL:AB019619) (377 aa) fasta FT scores: E(): 2.8e-28, 33.33% id in 375 aa, and to FT Bacteroides thetaiotaomicron putative unsaturated FT glucuronyl hydrolase BT3348 SWALL:AAO78454 (EMBL:AE016940) FT (400 aa) fasta scores: E(): 7.1e-106, 63.11% id in 404 aa, FT and to Bacteroides thetaiotaomicron unsaturated FT glucuronylhydrolase BT2913 SWALL:AAO78019 (EMBL:AE016938) FT (402 aa) fasta scores: E(): 1.7e-67, 46.56% id in 393 aa" FT /db_xref="GOA:Q5LIC4" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR010905" FT /db_xref="InterPro:IPR012341" FT /db_xref="UniProtKB/TrEMBL:Q5LIC4" FT /protein_id="CAH06102.1" FT /translation="MNLKPLLGAACAMICVACSNHKPTVPSFITENVEFAKAQLGLAID FT TIEASGKCLNPVTLNRDGSVYYCGYADWRSGFFPGSIWYLYELTGDTSYLPLARKYTEA FT IRPAEHLTWHHDIGFIINCSFGNGLRLAPDTAAYKNVMIQAAKSLCTRFRPNAGVIQSW FT DVKGNSWQSERGWECPVIIDNMMNLELLFEATKLSGDSTFYKVAVAHADRTLSEHFRPD FT GSCYHVVDYNISDGSVRHKQTAQGYADESVWSRGQAWAIYGFTICYRETKDRKYLDQAL FT KTFNRMKNDPHMPEDLIPYWDMDAPNIPNEPRDASSASCIASALYEISTYAVSDAASYK FT AYADRIMHSLASPDYRAALGTNGNFILMHSVGSIPHNSEIDVPLNYADYYFLEALKRRK FT DLDK" FT misc_feature complement(393617..393667) FT /note="Signal peptide predicted for BF0331 by SignalP 2.0 FT HMM (Signal peptide probability 0.967) with cleavage site FT probability 0.379 between residues 17 and 18" FT CDS complement(393671..395578) FT /transl_table=11 FT /locus_tag="BF9343_0324" FT /old_locus_tag="BF0332" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4410 SWALL:AAO79515 (EMBL:AE016945) (644 aa) FT fasta scores: E(): 1.8e-164, 57.96% id in 640 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT2963 SWALL:AAO78069 (EMBL:AE016938) (980 aa) fasta FT scores: E(): 3e-18, 21.26% id in 536 aa" FT /db_xref="InterPro:IPR008929" FT /db_xref="InterPro:IPR012480" FT /db_xref="UniProtKB/TrEMBL:Q5LIC3" FT /protein_id="CAH06103.1" FT /translation="MKKLLIFTLLLCCTVKALSYTERNYLQKQANVSSLQEVLILNQQW FT VTYPAYTDRTGWDTFLGSFKNECILRGEKQLNYQWQVVKATDYMEFERSGNRSVMETPF FT ANNNNAIADLLLAELAEGKGRFIDQLINGVYHSCEMTSWALAAHLNAQQSHRSLPDFKE FT NIIDLTAGDLGSLLAWTYYYMHKEFDKLNPAISERLRHTLQQRILDPYMNNDHFWWMAV FT NYRPGMLVNNWNPWCNSNALMCFMLLENDKEMLAKAIYRSMVSVDKFINYTHTDGACEE FT GPSYWGHAAGKMFDYLELLSAVTGGTVSIFDNPMIKNMGEYISRSYVGKGWVVNFADAS FT AKGSGDAPLIFRYGKAVNSNEMKGFAAMINTNKLPSGRDIYRTLAAIKIANELKETQAA FT HLTPPFSWYPETEFCYITDNKGNFLAAKGGYNDESHNHNDAGTFSFWIDQTPFLIDAGV FT GTYTRQTFSKDRYTIWTMQSNYHNLPLINGVPQRYGATYKATQVQADKRKNTFTANIAT FT AYPAEAEVESWIRSYSLQKGQLRISDSFRLTTAKQPNQINFMTWGQVNTEIPGKIQLEV FT KGKKAVIEYDKQLFDVKTEIIPLTDTRLSNVWGKSICRITLTATNIYKTGNYSFTIKKQ FT " FT misc_feature complement(395522..395578) FT /note="Signal peptide predicted for BF0332 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.952 between residues 19 and 20" FT CDS complement(395930..397777) FT /transl_table=11 FT /locus_tag="BF9343_0325" FT /old_locus_tag="BF0333" FT /product="putative exported protein" FT /note="Similar to Bacteroides fragilis putative outer FT membrane protein FrrH SWALL:Q8VTA8 (EMBL:AF329100) (495 aa) FT fasta scores: E(): 1.6e-05, 23.94% id in 355 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical FT protein, putative outer membrane protein BT3953 FT SWALL:AAO79058 (EMBL:AE016942) (631 aa) fasta scores: E(): FT 2.2e-13, 24.05% id in 661 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT0191 SWALL:AAO75298 FT (EMBL:AE016926) (463 aa) fasta scores: E(): 1.6e-10, 25.61% FT id in 285 aa" FT /db_xref="GOA:Q5LIC2" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LIC2" FT /protein_id="CAH06104.1" FT /translation="MKLLNKLFILTATAIAISSCQGDLLDTKPYDKASSGSMWSNENFC FT TMGVASIYATLREGYVAKEAYLMEAFSVGATCRDNDYPLLAGTASIGSGIFSDYWKQHY FT AGIYRANDAIVHLPDAPISESVKGKLLSEAKVLRAFYYYKLNAVFRGVPYYNTPMELDQ FT ADKPRESEENIWNFCIQDLTDAINDPNFPDRIATGKAEWGHVTKSVAYALRGKIYLWTK FT EWSKAEADFRKVGELGHSLFQDGYKQLFKEANEQSDEAIFSLQCIDNNGSTYGNSMSFR FT YGGRTTFGSCWNTMLASVDFVETYENIDGSKFNWDEYIPGFSSLDIKDREVFFLRNTDP FT VTVKAQYREIGFDGTEEALDDMVKKIKAKVDGRLEKLSDKAKALYLPAGNEARIKAAYD FT SRDPRLAQTVITPYATYDGSGNSVDHTFTSRWPYYGADTDYPYDLRTDTQSHLYYLFRK FT FVAEGSSEMTNREQSPIDLPIIRYATVVIGLAEALNEQGKTDEAIEWLNKVRQRAGVAL FT LNSNTATMVQGQEDMRVRIQNEFRWETAGEGVDFYEELRWKTWKESKFNNADGTAGMKD FT VWGTITYPYTWGGDQYYVWPIPKHETDMNKSLTQNSGWN" FT misc_feature complement(396281..396304) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(397712..397777) FT /note="Signal peptide predicted for BF0333 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.942 between residues 22 and 23" FT CDS complement(397795..401148) FT /transl_table=11 FT /locus_tag="BF9343_0326" FT /old_locus_tag="BF0334" FT /product="putative exported protein" FT /note="Similar to Bacteroides fragilis outer membrane FT receptor FrrG SWALL:Q8VTA9 (EMBL:AF329100) (1137 aa) fasta FT scores: E(): 4.8e-43, 32.65% id in 1139 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT0754 FT SWALL:AAO75861 (EMBL:AE016929) (1138 aa) fasta scores: E(): FT 5e-84, 32.22% id in 1145 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT2196 SWALL:AAO77303 FT (EMBL:AE016935) (1120 aa) fasta scores: E(): 7.9e-73, FT 32.02% id in 1096 aa" FT /db_xref="GOA:Q5LIC1" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LIC1" FT /protein_id="CAH06105.1" FT /translation="MRKSKLHLLPLSSKRVLVSTSLIMLLSGSAWAVSSQETVENGDAI FT TAVPQQRRTVKGIVKDANGEPIIGANVIVKGNKTIGVITNLNGEFSLEVPSNATLQISY FT IGYLNKEVKVSGNQVSFNIQLEEDSKTLDEVVVVGYGTQKKANLTGAVSSVDFEEQTKS FT RPITTVSSALAGLSPGLQASSGSAMPGEDNTTLRVRGNGTMNNASPLIIIDGMEGSLNA FT INPQDIENISILKDAASCAIYGARAANGVILVTTKSGDRDKIQVNYSGRISFNSPTRMI FT ETMSNYADYMELMNESCENVGSGTLFDQKYIDLWREKSKDPNGVNENGVPNYIAYPNTN FT WLKELYSGGMIHEHNLSVSGGSNKIRFLLSARYQDNEGIVDNTANKTYSVRANIEANPT FT QWLTLGTRTYASQMDREVGDFSNANTFLRQSTAGTYPEWNGSFGYPECPDERATANNPL FT YKLARNDGFKRYNRFNTTLFSKVKFFKDLSWDFNFNYNRYIYETRQWGVPAYQTRFSDG FT VIVDGITPPSQLSTSFGYESNYSYTLENLLNYHHTFAQKHDVSALLGYQEFYKNYYTVD FT AAKKGLIDESLNQFDEATEMTSTKGATQDYATRSVFGRVNYAYNSRYLFEANFRYDGSS FT RFHKDHRWGFFPSLSGAWRISEESFMENTRIWLDNLKVRASWGKLGNSEIGNYEYMSVY FT STTNAVFGNALNSALYMGAIANSLLKWESTTSVNFGIDVNLLKNRLSISADLYQKKTDG FT ILYRPTIPYVFGTMTAPRQNLAKVSNKGVELSLGWRDNIGGVSYSINGNFSYNKSNIDA FT YNGTYERTWVEDPNNKLTGGKWEDNIGKVSSGGTTPIVEGRMMNEYYLRNVYHGNGSYY FT NADGSVNPQGGPKTGMIRTEKDMAWVKDMIAAGYEFQPGKTVAKNKIWYGDYIYADSNN FT NGVYGDDNDYTFQKTSNKPKYNFGFQASAAWKGFDLSMVWAGAAGFSIYWGATTGYNAA FT STEWGSTIAQRVAENHYFYNPENPDDPRTNINAKYPRMAYIDGYVQNRHGNTTLWLYKG FT DYIKLKNLSLGYTLPKNWVSKIAMQNARVYVSAENLLTITGFEGQDPESATGMGYSPFR FT TIAIGANITF" FT misc_feature complement(397798..400713) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -10.3, E-value 0.00031" FT misc_feature complement(401053..401148) FT /note="Signal peptide predicted for BF0334 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.995 between residues 32 and 33" FT repeat_region 401491..401514 FT /note="inverted repeat region P" FT repeat_region 401492..403339 FT /note="invertible region P; active in shotgun" FT CDS 401513..403162 FT /transl_table=11 FT /locus_tag="BF9343_0327" FT /old_locus_tag="BF0335" FT /product="putative two-component system sensor histidine FT kinase" FT /note="Similar to C-terminus of Pseudomonas putida bZIP FT histidine kinase TobS SWALL:Q9EVJ0 (EMBL:AF180147) (978 aa) FT fasta scores: E(): 1.4e-35, 31.26% id in 419 aa, and to FT C-terminus of Bacteroides thetaiotaomicron two-component FT system sensor histidine kinase/response regulator, hybrid FT BT3334 SWALL:AAO78440 (EMBL:AE016940) (1354 aa) fasta FT scores: E(): 2.8e-93, 47.58% id in 559 aa, and to FT C-terminus of Bacteroides thetaiotaomicron two-component FT system sensor histidine kinase/response regulator, hybrid FT BT2971 SWALL:AAO78077 (EMBL:AE016938) (1346 aa) fasta FT scores: E(): 1.3e-88, 47.98% id in 546 aa. Note: CDS is FT present on invertible region P which when inverted from FT this conformation may form an entire sensor histidine FT kinase gene" FT /db_xref="GOA:Q5LIC0" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q5LIC0" FT /protein_id="CAH06106.1" FT /translation="MSLEKERIEKEHIEEMNQAKLRFFTNVSHEFRTPLTLIISQVELM FT LQKNTIPPSLHNSIFRIRKHAQQMKLLISELLDFRKFDQNYIQLKLSEQSLNTFLEEVY FT LSFSAYASQKSISYHLKLLEQDISIWIDDWQMRKVLFNLLSNAFKHVPDKGEISILTST FT TPDQVVIAVKDSGNGISKEEQERIFDRFYQADNRNKAIHVGTGIGLALTKSIIQLHHGT FT IEVESELNEGSCFIVKLPKTRDCFEKDTEVVFLESPEKEPMVQENTIPDENFMKKDDST FT FETPLIDEREGKRKVLLVEDNVELLQVLKEIFSSLYQVVTAANGEEGLKQAFAEVPDLI FT VSDVMMPVMTGTEMCLKIKNNINLCHIPVVLLTALDTVDQNIEGLRRGADDYITKPFNA FT KILITRCNNLIRNRLLMQSRFAKDQILEINLLAANPIDKGFLDRVIKVVDKHIDNEDFD FT IGMLCQELGMGRTLLHTKFKALTGMTPNEFILNHRLKIASLMLKNEPYLQVAEISDRLG FT FGSPRYFSRCFKNQYNVTPMEYRKGAKQENLK" FT misc_feature 401567..401767 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 61.9, E-value 1.2e-15" FT misc_feature 401903..402238 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 134.6, FT E-value 1.6e-37" FT misc_feature 402392..402751 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 105.9, E-value 6.9e-29" FT misc_feature 402842..402982 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 30.2, E-value 4.1e-06" FT misc_feature 402998..403135 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 53.0, E-value 5.6e-13" FT CDS complement(403256..405694) FT /transl_table=11 FT /locus_tag="BF9343_0328" FT /old_locus_tag="BF0336" FT /product="putative two-component sensor histidine kinase" FT /note="Similar to N-terminus of Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase/response regulator, hybrid BT0958 SWALL:AAO76065 FT (EMBL:AE016929) (1329 aa) fasta scores: E(): 6.4e-17, FT 22.23% id in 805 aa, and to N-terminus of Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase/response regulator, hybrid BT0981 SWALL:AAO76088 FT (EMBL:AE016929) (1472 aa) fasta scores: E(): 4.8e-14, FT 23.02% id in 808 aa, and to N-terminus of Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase/response regulator, hybrid BT3786 SWALL:AAO78891 FT (EMBL:AE016942) (1345 aa) fasta scores: E(): 5.9e-14, FT 22.36% id in 845 aa. CDS is truncated at the C-terminus and FT may be able to form an intact protein on inversion of the FT adjacent invertible region P" FT /db_xref="GOA:Q5LIB9" FT /db_xref="InterPro:IPR011042" FT /db_xref="InterPro:IPR011110" FT /db_xref="InterPro:IPR011123" FT /db_xref="UniProtKB/TrEMBL:Q5LIB9" FT /protein_id="CAH06107.1" FT /translation="MNRHKLALSLIGIFIVQLSYAGYFKHIGREEGLSQSSVMAIYQDK FT LGRMWFGTREGVNIYNSNKMAVYKAWIQNGNRPDQKILIGNEVSAITGSQNGDVFLIVD FT HALLKYDIRKETFERLRQGSVYALTSHAGEIWCAGHDSIFRYNPQNNQLDFQLKTGISS FT INYLTINGNRFYIGAKEGLYTTENKGRVQCLIPKVDVYRIFQSSCQELWVGCRTQGLYR FT INRNGRINRIPYDPSSPNGISSEQIREFVEDQQGNIWFGTFDGLQKYDPSTQTYSLIKQ FT EQRPGGLSHSSIFSLYQDVQGTIWIGSYYGGVNYFNPDNNAFNYYTYNPDRSDCLNYPF FT AGAMTEDKDHHLWICTDGGGLACLDRQAGHFTTYTAGGPNSLPHNNLKSICYDPKRDCL FT YIGTHMGGLSRFDRKTGRFYNYLNHSTKGLKEPNDVIFQVSFYNDQLIVSARNGVFSMN FT PDTNEFRLLYDGYYYQTFTIDPKGFLWLSAGTNLYSINLKHPEEVKSFSLPASIGQFGI FT SKILKGNNQYLYIATLGSGLFCYNEQTQTCINYTPEQNQLLSNYCYNLLQTSTDNILIT FT SDRGITLFNPTTESFRSIELDNGLSLSSIINGCGVWMCSDHTIFIGGTGGLSSFLEKDL FT NKEYPKPKLYFSSLSVNNARISPDDKSRILTEGLPFVREINLNATQNNLTVEFASSNYV FT DILNNTWYEYQLEGFDKQWSLTSQTSLKYTNLDPGDYVLHVRQKGNSLKMRKAQEILLQ FT IHINTPWYLTWWAWLSYITISISVTYFIWREKSSRRTLAILRQSLSSLTYHQILFNPAI FT " FT repeat_region complement(403317..403340) FT /note="inverted repeat region P" FT misc_feature complement(order(403349..403417,405623..405676)) FT /note="2 probable transmembrane helices predicted for FT BF0336 by TMHMM2.0 at aa 7-24 and 760-782" FT misc_feature complement(405566..405631) FT /note="Predicted helix-turn-helix motif with score FT 1043.000, SD 2.74 at aa 22-43, sequence FT GYFKHIGREEGLSQSSVMAIYQ" FT CDS complement(405834..406577) FT /transl_table=11 FT /locus_tag="BF9343_0329" FT /old_locus_tag="BF0337" FT /product="conserved hypothetical exported protein" FT /note="Similar to Xanthomonas axonopodis hypothetical FT protein Xac0836 SWALL:Q8PP52 (EMBL:AE011715) (214 aa) fasta FT scores: E(): 1.2e-15, 29.79% id in 198 aa, and to FT Xanthomonas campestris hypothetical protein Xcc0781 FT SWALL:Q8PCF3 (EMBL:AE012178) (233 aa) fasta scores: E(): FT 3.5e-14, 27.23% id in 235 aa, and to Agrobacterium FT tumefaciens hypothetical protein atu5455 or agr_pat_668 FT SWALL:Q8UJM1 (EMBL:AE008966) (217 aa) fasta scores: E(): FT 1.1e-11, 28.64% id in 192 aa" FT /db_xref="GOA:Q5LIB8" FT /db_xref="InterPro:IPR013830" FT /db_xref="InterPro:IPR013831" FT /db_xref="UniProtKB/TrEMBL:Q5LIB8" FT /protein_id="CAH06108.1" FT /translation="MIKSILIALCTVLLCWNSIPAEAQTPQDSVRFIGYLPVRHTDPTK FT WITRYQSEIDRYQTENQMLKDTSCDVLFLGSSSINLWDNIYRDMAPLKILRRSYGGAAL FT RDMLYNYDVIARGYHPRSIVIYVENDLAGTPEDLTVGETFDFFRLLTNRLQRDYPDIPI FT FILSYKPSLARKEMIPKHEIINALLQEYASKRGGLTYIDVASCLYDNNGKLRKDIFKQD FT GLHMNQNGYDLWTAILKPKILESIR" FT misc_feature complement(406509..406577) FT /note="Signal peptide predicted for BF0337 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.995 between residues 23 and 24" FT CDS complement(406578..407933) FT /transl_table=11 FT /locus_tag="BF9343_0330" FT /old_locus_tag="BF0338" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3566 SWALL:AAO78672 (EMBL:AE016941) FT (454 aa) fasta scores: E(): 2e-160, 82.39% id in 443 aa, FT and to Agrobacterium tumefaciens hypothetical protein FT atu3054 or agr_l_3503 SWALL:Q8UBG2 (EMBL:AE009236) (425 aa) FT fasta scores: E(): 8.3e-60, 40.09% id in 409 aa, and to FT Xylella fastidiosa hypothetical protein Xf2449 SWALL:Q9PAP6 FT (EMBL:AE004053) (544 aa) fasta scores: E(): 9.3e-22, 30.79% FT id in 513 aa" FT /db_xref="InterPro:IPR016883" FT /db_xref="InterPro:IPR019282" FT /db_xref="PDB:3EU8" FT /db_xref="UniProtKB/TrEMBL:Q5LIB7" FT /protein_id="CAH06109.1" FT /translation="MNIQLVTHNSKLLFVLFALFLFVACKPKEKPSSATSLTDDALMDT FT VQRRTFNYFWDAAEPNSGLARERYHMDGEYPAGGPEIVTSGGSGFGIMAILAGIDRGYV FT SREEGLRRMEKIVGFLEKADRFKGAYPHWWNGETGHVQPFGQKDNGGDLVETAFLMQGL FT LAVHQYYAEGSAEEKKLAGRIDKLWREVDWNWYRHGGQNVLYWHWSPEYGWEMNFPVHG FT YNECLIMYILAAASPTHGVPAAVYHEGWAQNGAIVSPHKVEGIELHLRYQGGEAGPLFW FT AQYSFLGLDPVGLKDEYCPSYFNEMRNLTLVNREYCIRNPKHYKGYGPDCWGLTASYSV FT DGYAAHGPLERDDRGVISPTAALSSIVYTPDQSLQVMHHLYEMGDKVFGPYGFYDAFSE FT TADWYPKRYLAIDQGPIAVMIENYRTGLLWKLFMSHPDVQNGLKKLGFNVKK" FT misc_feature complement(407862..407933) FT /note="Signal peptide predicted for BF0338 by SignalP 2.0 FT HMM (Signal peptide probability 0.698) with cleavage site FT probability 0.291 between residues 24 and 25" FT CDS complement(408099..410399) FT /transl_table=11 FT /locus_tag="BF9343_0331" FT /old_locus_tag="BF0339" FT /product="putative exported beta-glucosidase" FT /note="Similar to previously sequenced Bacteroides fragilis FT beta-glucosidase BlgX (BF4170) SWALL:O31356 (EMBL:AF006658) FT (764 aa) fasta scores: E(): 0, 80.74% id in 748 aa, and to FT Bacteroides thetaiotaomicron periplasmic beta-glucosidase FT precursor BT3567 SWALL:Q8A1U1 (EMBL:AE016941) (771 aa) FT fasta scores: E(): 0, 81.58% id in 771 aa, and to FT Flavobacterium meningosepticum beta-glucosidase Bgl FT SWALL:O30713 (EMBL:AF015915) (726 aa) fasta scores: E(): FT 2.4e-182, 64.47% id in 729 aa. Note:" FT /db_xref="GOA:Q5LIB6" FT /db_xref="InterPro:IPR001764" FT /db_xref="InterPro:IPR002772" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LIB6" FT /protein_id="CAH06110.1" FT /translation="MNKKYSLLILLALLLPLGLQAQKPPQDMDRFLDNLLKRMTLEEKI FT GQLNLPVTGEITTGQAKSSDIATKIKRGEVGGLFNLKGVDKIRDVQHLAVENSRLGIPL FT LFGMDVIHGYETIFPIPLGLSCTWDIPAIEESARIAAVEASADGISWTFSPMVDISRDP FT RWGRVSEGSGEDPFLGALIARAMVRGYQGKDMSRNDEIMACIKHFALYGAAEAGRDYNT FT VDMSRQRMFNDYMLPYQAGVEAGAGSVMASFNEVEGVPATANKWLMTDVLRGAWGFNGF FT VVTDFTGISEMIEHGIGDLQTVSARAINAGVDMDMVSEGFIGTLKKSVEEGKVSVETVN FT TACRRILEAKYKLGLFDNPYKYCDLKRPARDIFTKEHRAAARKIAGESFVLLKNEGLSP FT TLAPVLPLSPTGTIAVIGPLANTRSNMPGTWSVAAVLDKSPSLVEGLTEWVGNQGKILY FT AKGSNLIGDAAYEERATMFGRSLNRDNRTDQQLLDEALKIASQADVIVAALGESSEMSG FT ESSSRTNLNLPDVQHTLLEALLKTGKPVVLVLFTGRPLVLNWEQEHVPAILNVWFGGSE FT AGPAIGDVLFGAVNPGGKLTMTFPKSVGQIPLYYAHKNTGRPLKEGKWFEKFRSNYLDV FT DNDALYPFGYGLSYTTFRFSDITLNRSSIGMDNELVASVTVTNTGDRAGSEVVQLYIRD FT LVGSVTRPVKELKGFEKIYLQPNESRTVRFTIAPEMLKFYNADLKFVAEPGDFDVMIGP FT DSRNVKTARFTLH" FT misc_feature complement(408447..409235) FT /note="Pfam match to entry PF01915 Glyco_hydro_3_C, FT Glycosyl hydrolase family 3 C terminal domain, score 302.0, FT E-value 6.4e-88" FT misc_feature complement(409404..410318) FT /note="Pfam match to entry PF00933 Glyco_hydro_3, Glycosyl FT hydrolase family 3 N terminal domain, score 428.2, E-value FT 6.3e-126" FT misc_feature complement(410337..410399) FT /note="Signal peptide predicted for BF0339 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.988 between residues 21 and 22" FT CDS complement(410502..412022) FT /transl_table=11 FT /locus_tag="BF9343_0332" FT /old_locus_tag="BF0340" FT /product="putative exported protein" FT /note="Similar to Bacteroides fragilis fragilis regulatory FT region FrrH SWALL:Q8VTA8 (EMBL:AF329100) (495 aa) fasta FT scores: E(): 1.6e-06, 25.53% id in 419 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT3568 FT SWALL:AAO78674 (EMBL:AE016941) (509 aa) fasta scores: E(): FT 2.3e-159, 72.69% id in 509 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT3089 SWALL:AAO78195 FT (EMBL:AE016938) (496 aa) fasta scores: E(): 4.2e-27, 30% id FT in 520 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LIB5" FT /protein_id="CAH06111.1" FT /translation="MKLNKYILPIALAVSALSFSSCNDFLDRHPQGQFTEDDNPGALAE FT GKVFNIYTMMRNYNITAGIPAFAIEYFRSEDSEKGSTASDGADQAAMYDDFQYNASNGL FT IKAYWSQNYAVIYQCNDVIETIEKGNLTEENDLRNKGEALFFRAYCYFNLVRAFGEVPL FT VTFKVNDASEANVPKTTAEEIYKQIDSDLTQAEGLLPRQWQSAYLGRLTWGSARALHAR FT TYMMRNDWQNMYTAATDVMNSGQYNLNTPYDVIFTDEGENSSESVFELQCASTAALPAS FT DKIGSQFCEVQGVRGSGQWDLGWGWHMGTELMGEAFEPGDPRKDATLLYFRRSDTDPIT FT PENTNKPYGESPVSQADGTYFNKKAYTNPALREEFTRHGFWVNIRIIRYGDVVLMAAES FT ANELGKTGEASNYLEMVRARARGNNPDILPKVTSLDQTVLRDAIRHERRVELGLESGRF FT YDLVRWGIASQVLHAAGKTGYQPKNALLPLPQDEIDKSKGVLVQNPDY" FT misc_feature complement(411954..412022) FT /note="Signal peptide predicted for BF0340 by SignalP 2.0 FT HMM (Signal peptide probability 0.964) with cleavage site FT probability 0.554 between residues 23 and 24" FT CDS complement(412034..415084) FT /transl_table=11 FT /locus_tag="BF9343_0333" FT /old_locus_tag="BF0341" FT /product="putative TonB-dependent outer membrane exported FT protein" FT /note="Similar to Bacteroides CACcae tonB-linked outer FT membrane protein OmpW SWALL:Q93FV1 (EMBL:AF305878) (947 aa) FT fasta scores: E(): 0, 83.42% id in 947 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT3569 FT SWALL:AAO78675 (EMBL:AE016941) (1021 aa) fasta scores: E(): FT 0, 82.67% id in 1016 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT4724 SWALL:AAO79829 FT (EMBL:AE016946) (1139 aa) fasta scores: E(): 4.4e-69, FT 29.77% id in 1068 aa" FT /db_xref="GOA:Q5LIB4" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LIB4" FT /protein_id="CAH06112.1" FT /translation="MKTKPLRLLRQKRASWLKSVFVLTCLLLSTSVAMAQTKTVTGTVT FT DSFNEPLIGASILVKGTSTGAVTDMDGKYSISVTPNDVLVFSYVGYEKQEIKVGQQTVI FT NVTLKDDSQMLAETVIIGYGSAKKRDLTGSITNIKGSEIANKPATNPLSSLQGKIAGVQ FT IVNSGQAGADPEIRIRGTNSINGYKPLYVVDGLFNDNINFLNPEDIESMEVLKDPSSLA FT IFGVRGANGVIIVTTKRAKEGQTLVNINTSFGWKSVVDKIKMVNAPQFKELYNEQMANQ FT GNALFDFSNWNANTDWQDEIFQTGFITNNNVSITGASEKHSFYLGVGYSHEQGNIKHEK FT YSKVTINASNDYKITKDIKVGFQFNGARMLPADSKTVLNAIRTTPVAPVYNEEYGLYTS FT LPEFQKAQMNNPMVDVNLRANTTRAVNYRASGSIYGEVDFLKHFTFKAMFSMDYATNDS FT RTYKPIIKVYDATVAGNVATLGNGKTEVSQNKQNETKVQSDYLLTYQNSFADGTHNLTA FT TAGFTTYYNSLSGLDASRGQGIGLVIPNNPDKWFVSIGDLATATNGSTQWERTTVSMLA FT RIIYNYKGKYLFNGSFRRDGSSAFAYTGNQWQNFYSIGAGWLMTEEEFMKDITWLDMLK FT LKGSWGTLGNQNMDKAYPAEPLLENAFAAVFGKPAIIYPGYQLAYLPNPRLRWEKVEAW FT ETGFETNMFRNRFHFEGVYYKKNTKDLLATVPGLSGTVPGIGNLGEIENKGVELMASWR FT DQIGDWGYSVSANLTTISNKVKSLVQDGYSIIAGDKSQSYTMAGYPIGYFYGYKVAGVY FT QNQAEIDASPVNTLATVTPGDLKFADVNGDGKITPDDRTKIGDPTPDVTYGISLGLSYK FT NWELSMEMMGQGGNQIYRTWDNYNWAQFNYMEQRLDRWHGEGTSNTQPLLNTKHAINSE FT NSEYFIEDGSFFRIRNLQLAYSFDKTLLSKIRMQALKVYVNIQNLKTWKHNTGYTPEIG FT GSAIAFGVDNGTYPVPAVYTFGINLTF" FT misc_feature complement(412226..414700) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -15.7, E-value 0.00043" FT misc_feature complement(413633..413656) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(414980..415084) FT /note="Signal peptide predicted for BF0341 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.994 between residues 35 and 36" FT CDS 415615..415926 FT /transl_table=11 FT /locus_tag="BF9343_0334" FT /old_locus_tag="BF0342" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIB3" FT /protein_id="CAH06113.1" FT /translation="MTTLANTSFAATSGKGGTISGVPSSAQYLYFMANIKTDVGQVFPA FT VEGTTSADARLRLNRLQGTAPSDWTANAFVDYCTPLASALSFYPDVTISTPRYPRMSE" FT CDS complement(416057..416350) FT /transl_table=11 FT /locus_tag="BF9343_0335" FT /old_locus_tag="BF0343" FT /product="putative DNA-binding protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4733 SWALL:AAO79838 (EMBL:AE016946) FT (101 aa) fasta scores: E(): 0.0043, 36.25% id in 80 aa, and FT to Acinetobacter lwoffii Cro-like protein Cro SWALL:Q8GMU5 FT (EMBL:AJ250245) (100 aa) fasta scores: E(): 0.045, 28.23% FT id in 85 aa" FT /db_xref="GOA:Q5LIB2" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:Q5LIB2" FT /protein_id="CAH06114.1" FT /translation="MMDITTLDQFKDEIYGVKGTPRRDNLERELETLRIGVQIRNARQK FT KEMTQAQLAERINKKRTFISKVENDGGNLTLKTLIDIVERGLGGKLNIEVKI" FT misc_feature complement(416072..416236) FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 32.3, E-value 9.3e-07" FT misc_feature complement(416144..416209) FT /note="Predicted helix-turn-helix motif with score FT 1582.000, SD 4.58 at aa 48-69, sequence FT MTQAQLAERINKKRTFISKVEN" FT CDS complement(416350..416634) FT /transl_table=11 FT /locus_tag="BF9343_0336" FT /old_locus_tag="BF0344" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4732 SWALL:AAO79837 (EMBL:AE016946) FT (110 aa) fasta scores: E(): 7.3e-12, 48.31% id in 89 aa, FT and to Vibrio cholerae hypothetical protein s045 FT SWALL:Q8KQX9 (EMBL:AY055428) (107 aa) fasta scores: E(): FT 0.00032, 37.34% id in 83 aa" FT /db_xref="InterPro:IPR009241" FT /db_xref="UniProtKB/TrEMBL:Q5LIB1" FT /protein_id="CAH06115.1" FT /translation="MEQSPKVQNKITKILEYIECIPTKYLKHMESTDGLYEMRITLGSD FT IFCVFCFFDKGRLVVLLSGFQKKTQKTPKKEIDKAVRLMAQYYDDKKRR" FT CDS 417101..417817 FT /transl_table=11 FT /locus_tag="BF9343_0337" FT /old_locus_tag="BF0345" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT DNA-binding protein p5482_33 SWALL:Q8ABW5 (EMBL:AY171301) FT (276 aa) fasta scores: E(): 2.2e-33, 56.89% id in 232 aa, FT and to Methanosarcina mazei hypothetical protein Mm2203 FT MM2203 SWALL:Q8PUX5 (EMBL:AE013460) (344 aa) fasta scores: FT E(): 8.1e-23, 41.48% id in 229 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT3040 FT SWALL:Q8A3B4 (EMBL:AE016938) (338 aa) fasta scores: E(): FT 4.1e-22, 43.52% id in 193 aa. Possible alternative start FT site at codon 6" FT /db_xref="UniProtKB/TrEMBL:Q5LIB0" FT /protein_id="CAH06116.1" FT /translation="MANTNMEHGEIILYQPDNTIKLEVRIENETVWLTQAQIVNLFQSS FT KANISEHIRNIYDSDELSAESTVRKFRTVRMEGNRKVTRILEYYNLDMIISVGYRVNSK FT RGVQFRQWSTGVLKEYLLKGYAINQRVEQLENKANTHDRQLEELTNKVDFFVRTSLPPI FT EGVFFNGQIFDAYVFSAQLIKSAKSSLVLIDNFVDESVLLLLSKRLPGVTSIIYTKQVT FT PQLELDLTKHNSQYPQ" FT CDS complement(417879..418103) FT /transl_table=11 FT /locus_tag="BF9343_0338" FT /old_locus_tag="BF0346" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIA9" FT /protein_id="CAH06117.1" FT /translation="MGEHTKVHIISGITSAAPTHSFPFFLNIHQDTDGQPTCPCVNKDY FT NKSVIILAGISILEKAKSFLPRSLSEAPI" FT CDS 418625..418975 FT /transl_table=11 FT /locus_tag="BF9343_0339" FT /old_locus_tag="BF0347" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LIA8" FT /protein_id="CAH06118.1" FT /translation="MGKPIIKILYFHRRRTNASGWYRLEYIFQRGKKTLRYVLSTRDPE FT YLVCFCSPCMVERSEMIVFVAELLLEIHKVKYSHLKVTPSYAYATPKYKSRINQMCKKS FT RYHKTPVIIDGL" FT repeat_region 419454..419889 FT /note="hit to rep1 1..437 score: 2026 percent id: 96.11" FT tRNA complement(419981..420065) FT /note="tRNA Leu anticodon TAG, Cove score 67.89" FT CDS 420462..423521 FT /transl_table=11 FT /locus_tag="BF9343_0340" FT /old_locus_tag="BF0349" FT /product="putative TonB dependent outer membrane exported FT protein" FT /note="Similar to Porphyromonas gingivalis receptor antigen FT RagA SWALL:Q9ZA60 (EMBL:AJ130872) (1017 aa) fasta scores: FT E(): 2.7e-74, 31.53% id in 1059 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT2364 SWALL:AAO77471 FT (EMBL:AE016935) (1025 aa) fasta scores: E(): 0, 73.76% id FT in 1014 aa, and to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT3103 SWALL:AAO78209 (EMBL:AE016939) (1061 aa) FT fasta scores: E(): 2.8e-72, 30.74% id in 1067 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT1440 FT SWALL:AAO76547 (EMBL:AE016931) (1042 aa) fasta scores: E(): FT 3e-60, 32.47% id in 1081 aa, and to Bacteroides fragilis FT FrrG frrG SWALL:Q8VTA9 (EMBL:AF329100) (1137 aa) fasta FT scores: E(): 2.7e-54, 29.34% id in 1053 aa" FT /db_xref="GOA:Q5LIA7" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LIA7" FT /protein_id="CAH06119.1" FT /translation="MRNLKAILIVLLCLCGIHVQAQQLEIKGLVTSSEDKQPLIGATVA FT VKGVPGRGVVTDMDGRYTLKIEPSDKILVISYIGMKSSEVKVPKNGVLNVVLQPESLNL FT DEVVVTGYGNFSKSSFTGSANTLRADMLKNVPVLSVEQKLQGMTTGVNITSGSGQPGAN FT QSIRIRGMGSFNASNEPLFVIDGIPVTSGSMGAGTGADAAYMNNAKTNVMSTLNPADIE FT NITVIKDAAAASLYGSRAANGVILITTKKGAVGRTKVTLSASGGFSNAAVNFRPTLNGE FT QRREMIYEGLYNSAVDKGLQSPEAYANANIDTYAGIPELGYTDWRKELIRTAHNQNYEV FT TASGGNERTTFYASLGFNRQEGLVENSNLDRYSARLNMTHKIGSRVEVGGNMMFTQISQ FT EMNEERGSNINPFLCVAVSATPSMPVRDASGNYVGSYAGTNVNPLRDIRTDYNRSRMTR FT MFSTGYASVDIIKGLKLKETLSYDYTVQKDSRYLNPLSGAGPKSGSDAQTSKGFTEYGK FT LLSSTSLNYTHTFAAKHHLDILAAYELESYQSDKAMGEKAKLPSDVLLEPDNAAVLKSF FT VSSTQAYRMISYLSRLNYDYDNRYYIAGSYRRDGSSRLAPESRWGDFWSVSGMWHLSSE FT PFMEAVKPVLNDVKIRASYGVNGNQPGAFYGYMGLYSYGQNYMGAAGSYESAQANPKLK FT WEKNYNLNIGLSLTFIDRIFVNLEYYNRDTKDLLYNRPISSTTGFLNYLANIGQLNNKG FT VEFELRTINFAGPDFNWTSVLNLTHNRNKIVALDGDIKQSVEGSWFIHKIGLPYNSFYV FT KEFAGVDPSTGKGLYYLNTQDEKGNYNREMTDDASKAQAIPYKSADPKISGGFTNILSY FT KWFDLGLTFTYSLGGYSFDKTGTLIETDGSKEKSYNLPVYALDRWQKPGDRTDVPRFVL FT EQGAGPQNSSRYIHSTDHIRLKNLTLGFTLPGRWVQKALIENARVYFSGSNLLTWAKWK FT QYDPEVPVNGEVFCEAPPMRTFNFGVEITF" FT misc_feature 420462..420524 FT /note="Signal peptide predicted for BF0349 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.958 between residues 21 and 22" FT misc_feature 420807..423518 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -1.0, E-value 0.00018" FT misc_feature 423129..423149 FT /note="PS00154 E1-E2 ATPases phosphorylation site." FT CDS 423550..425037 FT /transl_table=11 FT /locus_tag="BF9343_0341" FT /old_locus_tag="BF0350" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2365 SWALL:AAO77472 (EMBL:AE016935) (497 aa) FT fasta scores: E(): 1.4e-113, 58.4% id in 500 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT2269 FT SWALL:AAO77376 (EMBL:AE016935) (469 aa) fasta scores: E(): FT 3.1e-22, 33.66% id in 505 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT3311 SWALL:AAO78417 FT (EMBL:AE016940) (506 aa) fasta scores: E(): 3.1e-12, 24.13% FT id in 522 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LIA6" FT /protein_id="CAH06120.1" FT /translation="MKRTLIYMFAAMSLVGSSCSGDWLNLNPSTSVTTPQAIRTLEEAQ FT IALNGIYRIAASHSYYGDNYLYYADCRGEDVQARVSKGAGKRVSPYYEFNVTADDALNI FT TRVWNQPYSVIHQANSLLERIESGAVVTDDAVALNCIKAEALALRGLALFDLTRLFAMP FT YTLNNGTSLGVPIEIKTTLPTHQPARNTVAECYQQVIDDMTGALKLSALSADKKNGYLN FT VWSVKALLSRVYLYMNDNEKALALAKEVMNNGGLYQLFTHDEYPTVWGKDFSSESLFEF FT YYTLSEPDGGTGGEGAPMVYADNVKDWNNLVLTKAFLDLLGEDPDDVRHSLNRLPEKPE FT EDILPEGSKGYPKYLNKYPGKTGDNPQDNDICIIRLSEVYLNAAEAAFKLGGAENLKFS FT LDCLNAIVSRANPVKSVKETELSLERILKERRKELVGEGHAFFDAMRNGLSVSRTGGWH FT LPSVAAAAVISPSDPRVALPIPQAEIDANPNMVQNPH" FT misc_feature 423550..423612 FT /note="Signal peptide predicted for BF0350 by SignalP 2.0 FT HMM (Signal peptide probability 0.993) with cleavage site FT probability 0.598 between residues 21 and 22" FT CDS complement(425193..426224) FT /transl_table=11 FT /locus_tag="BF9343_0342" FT /old_locus_tag="BF0351" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3577 SWALL:AAO78683 (EMBL:AE016941) FT (340 aa) fasta scores: E(): 3.4e-92, 65.21% id in 345 aa, FT and to Caulobacter crescentus hypothetical protein Cc2028 FT SWALL:Q9A6Q6 (EMBL:AE005876) (462 aa) fasta scores: E(): FT 1.8e-09, 25.81% id in 306 aa" FT /db_xref="GOA:Q5LIA5" FT /db_xref="InterPro:IPR005151" FT /db_xref="InterPro:IPR024070" FT /db_xref="UniProtKB/TrEMBL:Q5LIA5" FT /protein_id="CAH06121.1" FT /translation="MKNPIIYRILQQGFCLIFCLGLLSSCIREEEFVNNPQGNFEQLWK FT IIDEQYCFLDYKQIDWDEIHTRYQKLITPNMGSEGLFEVLSEMLYELQDGHVNLASAHN FT VSYYDAWYQDYPRNFRADLLEDSYLGRASTDYRTAAGLKYKILKDNIGYIRYESFADPV FT GNGNLDEVLSYLSVCNGLIIDVRDNGGGNATNSARIASRFTNEKILTGYISHKTGTGHN FT DFSKPYAIYLEPANGVRWQKKVVVLTNRRSFSATNDFVNHMRCLPNVTTIGDKTGGGSG FT MPFTSELPNGWSVRFSASPHFDAEMNHIEFGIEPDIKADMLQEDELRGKDTLIEMARKL FT LSE" FT CDS complement(426237..427106) FT /transl_table=11 FT /locus_tag="BF9343_0343" FT /old_locus_tag="BF0352" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3578 SWALL:AAO78684 (EMBL:AE016941) (286 aa) FT fasta scores: E(): 3.9e-92, 82.75% id in 261 aa" FT /db_xref="InterPro:IPR016879" FT /db_xref="UniProtKB/TrEMBL:Q5LIA4" FT /protein_id="CAH06122.1" FT /translation="MKVKTSILLLLMIATALPSFGGNGNGNGTDSLQATRYVTRATMYG FT VGYTNVFDTYLSPQEYKGIEFRISRETMRMTTLGDGNVSVQNFFQANLAYTHNRVDNNN FT TFAGLVNWNYGLHYQFRITDNFKLLAGGMGDFNGGFVYNLRNTNNPASARAYINLDASG FT MAIWHTKIKNYPLALRYQVNLPVIGVMFSPHYGQSYYEIFTLGHASGVIRFTSLHNQPA FT LRQMLSVDFPIRYTKMRLSYLCDLQQSKLNGIKTHTYSQVFMVGFVHDLFRIRNKNGTP FT LPPAVRAY" FT misc_feature complement(427044..427106) FT /note="Signal peptide predicted for BF0352 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.901 between residues 21 and 22" FT CDS complement(427131..429686) FT /transl_table=11 FT /locus_tag="BF9343_0344" FT /old_locus_tag="BF0353" FT /product="putative topoisomerase" FT /note="Similar to Borrelia burgdorferi topoisomerase IV FT subunit A ParC or BB0035 SWALL:PARC_BORBU (SWALL:O51066) FT (626 aa) fasta scores: E(): 2.8e-83, 39.08% id in 632 aa, FT and to Bacteroides thetaiotaomicron topoisomerase IV FT subunit A BT3579 SWALL:Q8A1S9 (EMBL:AE016941) (850 aa) FT fasta scores: E(): 0, 88.13% id in 851 aa, and to FT Chlamydophila caviae topoisomerase, subunit A, putative FT CCa00026 SWALL:AAP04778 (EMBL:AE016994) (479 aa) fasta FT scores: E(): 3.3e-63, 42.29% id in 461 aa" FT /db_xref="GOA:Q5LIA3" FT /db_xref="InterPro:IPR002205" FT /db_xref="InterPro:IPR013758" FT /db_xref="InterPro:IPR013760" FT /db_xref="UniProtKB/TrEMBL:Q5LIA3" FT /protein_id="CAH06123.1" FT /translation="MYQNWFLDYASYVILERAVPHINDGLKPVQRRILHSMKRMDDGRY FT NKVANIVGHTMQFHPHGDASIGDALVQLGQKDLLVDCQGNWGNILTGDGAAAPRYIEAR FT LSKFALDVVFNPKTTEWKLSYDGRNKEPITLPVKFPLLLAQGVEGIAVGLSSKILPHNF FT NELCDASISYLRNEEFKLYPDFQTGGSIDVSKYNDGERGGAVKIRSKINKVDNKTLAIT FT EIPYGRTTTSVIDSILKAVDKGKIKIRKVDDNTAANVEILVHLAPGTSSDKTIDALYAF FT TDCEVSISPNCCVIDDQKPHFLTISHVLRKSADNTLSLLRQELEIKKDELQENLHFASL FT EKIFIEERIYKDKEFEQSKDMDAACEHIDRRLTPFYSQFIREVTKDDILRLMEIKMGRI FT LKFNSDKAEEAIARMNEDIAEINNHLANIVEYTIQWYRMLKEKYGKNFPRRTELRNFDT FT IEAAKVVEANEKLYINREEGFIGTSLKKDEFVACCSDIDDVIIFYRDGRYMVTPVADKK FT FVGKNVIYVNVFKKNDKRTIYNVAYRDGAEGTHYIKRFAVTSIVRDREYDVTQGKPDSR FT ISYFSANPNGEAEIIKVTLKPNPRVRRIIFERDFSEVTIRSRQSQGVILTRLPVHKIVL FT KQRGGSTLGGRKVWFDRDVLRLNYDGRGEYLGEFQSDDNILVVLNTGEFYTSNFDLSNH FT YEDNVSIVEKFDPNKIWTVALYDADQQNYPYLKRFCFEATTRKQNYLGENKHNRLILMT FT DEYYPRLEIIFGGHDSFRDPVVVDAEEFIAVKGFKAKGKRLTTYTVETINELEPTRFPD FT PPQNNEEDDTGEEPENLDPDSDKTENDILDEMTGQMKLF" FT misc_feature complement(428355..429638) FT /note="Pfam match to entry PF00521 DNA_topoisoIV, DNA FT gyrase/topoisomerase IV, subunit A, score 198.6, E-value FT 8.3e-57" FT CDS 429964..431505 FT /transl_table=11 FT /gene="glyS" FT /locus_tag="BF9343_0345" FT /old_locus_tag="BF0354" FT /product="putative glycyl-tRNA synthetase" FT /EC_number="6.1.1.14" FT /note="Similar to Leptospira interrogans glycyl-tRNA FT synthetase GlyS or La1388 SWALL:Q8F6C0 (EMBL:AE011318) (464 FT aa) fasta scores: E(): 2.7e-70, 47.7% id in 501 aa, and to FT Bacteroides thetaiotaomicron glycyl-tRNA synthetase BT3611 FT SWALL:AAO78716 (EMBL:AE016941) (513 aa) fasta scores: E(): FT 2.9e-201, 95.9% id in 513 aa, and to Chlorobium tepidum FT glycyl-tRNA synthetase GlyS or CT2255 SWALL:Q8KAB1 FT (EMBL:AE012970) (470 aa) fasta scores: E(): 9.2e-76, 53.02% FT id in 496 aa" FT /db_xref="GOA:Q5LIA2" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR002315" FT /db_xref="InterPro:IPR004154" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR022961" FT /db_xref="UniProtKB/TrEMBL:Q5LIA2" FT /protein_id="CAH06124.1" FT /translation="MAQEDVFKKLVSHCKEYGFVFPSSDIYDGLGAVYDYGQMGVELKN FT NIKKYWWDSMVLLHENIVGIDSAIFMHPTIWKASGHVDAFNDPLIDNKDSKKRYRADVL FT IEDQLAKYDDKINKEVAKAAKRFGEAFDEAQFRSTNGRVLEHQAKRDALHERFAKALND FT NNLEELRQIIVDEEIACPISGTKNWTEVRQFNLMFSTDMGSTADGSMKIYLRPETAQGI FT FVNYLNVQKTGRMKVPFGIAQIGKAFRNEIVARQFIFRMREFEQMEMQFFVRPGSELEY FT FKKWKEIRLKWHKALGFGDDHYRFHDHDKLAHYANAATDIEFLMPFGFKEVEGIHSRTN FT FDLSQHEKFSGKSIKYFDPELNESYTPYVIETSIGVDRMFLSIMSAAYCEEQLENGESR FT VVLKLPAALAPVKLAVMPLVKKDGLPEKAREIIDNLKFHFHCQYDEKDSIGKRYRRQDA FT IGTPYCVTVDHQTLEDNCVTLRNRDTMEQERVAISELNNIIADRVSITSLLKTIQ" FT misc_feature 430057..430863 FT /note="Pfam match to entry PF00587 tRNA-synt_2b, tRNA FT synthetase class II core domain (G, H, P, S and T), score FT 189.3, E-value 5.3e-54" FT misc_feature 430705..430767 FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT misc_feature 431182..431469 FT /note="Pfam match to entry PF03129 HGTP_anticodon, FT Anticodon binding domain, score 92.8, E-value 6e-25" FT CDS 431517..432068 FT /transl_table=11 FT /locus_tag="BF9343_0346" FT /old_locus_tag="BF0355" FT /product="putative fkbp-type 22 kDa peptidyl-prolyl FT cis-trans isomerase" FT /note="Limited similarity to C-terminus of Escherichia FT coli, and Shigella flexneri fkbp-type 22 kDa FT peptidyl-prolyl cis-trans isomerase FklB or B4207 or SF4279 FT SWALL:FKBB_ECOLI (SWALL:P39311) (205 aa) fasta scores: E(): FT 0.00019, 41.28% id in 109 aa, and to Bacteroides FT thetaiotaomicron putative fkbp-type peptidyl-prolyl FT cis-trans isomerase FkpA BT3612 SWALL:AAO78717 FT (EMBL:AE016941) (196 aa) fasta scores: E(): 2.6e-29, 49.2% FT id in 189 aa, and to Pseudomonas putida peptidyl-prolyl FT cis-trans isomerase, fkbp-type fklb-1 or PP0684 FT SWALL:AAN66309 (EMBL:AE016776) (205 aa) fasta scores: E(): FT 1.2e-06, 39.45% id in 109 aa" FT /db_xref="GOA:Q5LIA1" FT /db_xref="InterPro:IPR001179" FT /db_xref="InterPro:IPR023566" FT /db_xref="UniProtKB/TrEMBL:Q5LIA1" FT /protein_id="CAH06125.1" FT /translation="MNKKIYLLPLLLLALIFVSCEETKEATKFDNWRARNEGYIDSLKT FT VFDEKTDPELKAFEPEINPKLRIYYKKKISNDTGAIPLYTDSVNVFYRGSFIFGETFDQ FT NFTGADPGPFDSPTKFVIQTFITVGGVSGWAEILQRMRVGERWLVYIPWELAYGASGTD FT DIPGYSTLIFDMQLEEILDE" FT misc_feature 431517..431573 FT /note="Signal peptide predicted for BF0355 by SignalP 2.0 FT HMM (Signal peptide probability 0.989) with cleavage site FT probability 0.365 between residues 19 and 20" FT misc_feature 431544..431576 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 431745..432050 FT /note="Pfam match to entry PF00254 FKBP, FKBP-type FT peptidyl-prolyl cis-trans isomerase, score 58.8, E-value FT 1e-14" FT misc_feature 431784..431831 FT /note="PS00453 FKBP-type peptidyl-prolyl cis-trans FT isomerase signature 1." FT CDS complement(432180..433061) FT /transl_table=11 FT /locus_tag="BF9343_0347" FT /old_locus_tag="BF0356" FT /product="hypothetical exported protein" FT /note="no significant database matches" FT /db_xref="InterPro:IPR008972" FT /db_xref="UniProtKB/TrEMBL:Q5LIA0" FT /protein_id="CAH06126.1" FT /translation="MKTISKLFLLLSIILLSSCDETELDQTVTNQVNPQKEEDSRIVFN FT SAKEFYNTLDTLSYMTYEEQTEWIRASGIKYPLYKDLEFCEDEIMTEMPRAFQALFNHK FT MEMQINDTVIAFEKGNMYVKSIKEKILPVPVLYGQVGVNQEESEVTTRTVYETKYGKIG FT TSYQYEFKIPEGKSKYKYVHELKSVIIKENLPPYKSWSNLFLVLKLEWKGKKKWKVAEK FT EERNISIDLNVCKRNLAKVKYNQEIRIDVQNMDSKSHSINIEGYIIHEVVGIPSTKMFN FT GWSYPLVEWQPR" FT misc_feature complement(433008..433061) FT /note="Signal peptide predicted for BF0356 by SignalP 2.0 FT HMM (Signal peptide probability 0.979) with cleavage site FT probability 0.668 between residues 18 and 19" FT CDS complement(433121..433501) FT /transl_table=11 FT /locus_tag="BF9343_0348" FT /old_locus_tag="BF0357" FT /product="conserved hypothetical exported protein" FT /note="Limited similarity to Bacteroides thetaiotaomicron FT hypothetical protein BT3571 SWALL:AAO78677 (EMBL:AE016941) FT (118 aa) fasta scores: E(): 0.17, 24.39% id in 123 aa" FT /db_xref="InterPro:IPR021638" FT /db_xref="UniProtKB/TrEMBL:Q5LI99" FT /protein_id="CAH06127.1" FT /translation="MKKLTCLITLFLFISVGYINAETMASRKKIKMKVETQHHQRSLPP FT PCPAEAFICGNTVDLIFRETNKTAVVTIMNLDTGEAIHYNVSTNDCSISIDLGNNQSES FT NYNIELILDGKAYTGEFTTNEI" FT misc_feature complement(433439..433501) FT /note="Signal peptide predicted for BF0357 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.987 between residues 21 and 22" FT CDS complement(433650..435347) FT /transl_table=11 FT /locus_tag="BF9343_0349" FT /old_locus_tag="BF0358" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron FT TPR-repeat-containing proteins BT3570 SWALL:Q8A1T8 FT (EMBL:AE016941) (566 aa) fasta scores: E(): 1.8e-32, 32.31% FT id in 557 aa, and to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT0240 SWALL:Q8AB71 (EMBL:AE016926) FT (584 aa) fasta scores: E(): 5.7e-23, 25.82% id in 577 aa, FT and to Bacteroides thetaiotaomicron TPR-repeat-containing FT protein BT3220 SWALL:Q8A2T5 (EMBL:AE016939) (578 aa) fasta FT scores: E(): 1.1e-19, 24.73% id in 570 aa" FT /db_xref="GOA:Q5LI98" FT /db_xref="InterPro:IPR001440" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:Q5LI98" FT /protein_id="CAH06128.1" FT /translation="MRQYLLNIILLFLGFTIIYSCSRHQQINRTIFLADSIMEYQPDSA FT FKLLKTINQTDLSVSENAKYALLLAQAQDKAGHQLINDSLILIAINHYDHLSKDNNKAK FT AYFYLGRFYQNNNDYAKAINSYLIAEKATSDHDTLLTLIYDNLGTCYKNQDFYDKALEV FT YKDAYYIYKQYNSKNILYPLRGMASIYAIQEQFEKALKYYQTALTIASSTNDSTWQSIL FT FCDISRIYDNKNLYEAAYSYIVRSIQYAPRSSDLSAMYFWKGEILHNLNQLDSAFYYIN FT LAKKSSDLNTQASAYQALYEIKKEQGELNDAILYNDTSLILYDSIQDLNHSAEISHILK FT QHATETLQQAEVIKRQKHTAFLIVTTLLLIACITFIFLYKDNKRKKVYIKIQCELRNNQ FT IEKDELKEKIKTLIDSNTYIAERNKELKKEELKQQQVELWKRTLQICTRLFHTSTSYKK FT LHAIETAKFKKEREEKQKEINSIQKEINEVFIEAIQKLREQYPKLTQEDLFYCILQYLR FT LSTSTIKFCMRVESNQALTQRKYRIKKQISPQTFSIIFNESSPSEGVL" FT misc_feature complement(434211..434270) FT /note="1 probable transmembrane helix predicted for BF0358 FT by TMHMM2.0 at aa 323-342" FT CDS 435432..435935 FT /transl_table=11 FT /locus_tag="BF9343_0350" FT /old_locus_tag="BF0359" FT /product="putative nitroimidazole resistance-like protein" FT /note="Similar to Bacteroides fragilis nitroimidazole FT resistance protein NimE SWALL:Q9L4E6 (EMBL:AJ244018) (153 FT aa) fasta scores: E(): 8.2e-14, 38.41% id in 151 aa, and to FT Clostridium tetani 5-nitroimidazole antibiotic resistance FT protein CTC00899 SWALL:AAO35491 (EMBL:AE015939) (154 aa) FT fasta scores: E(): 1.2e-20, 46.71% id in 152 aa, and to FT Clostridium acetobutylicum possible 5-nitroimidazole FT antibiotics resistance protein, NimA-family CAC2475 FT SWALL:Q97G94 (EMBL:AE007746) (154 aa) fasta scores: E(): FT 2.2e-15, 42.76% id in 152 aa" FT /db_xref="GOA:Q5LI97" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="InterPro:IPR024747" FT /db_xref="UniProtKB/TrEMBL:Q5LI97" FT /protein_id="CAH06129.1" FT /translation="MEYINDLIRRKDRLLSEDEAMSLLENGEYGVLSISSTEEGVYGIP FT INYVWDKQQSIYFHCAPEGHKLCILQNCNQASFCVVGRTRVVSNQFSTEYESIVINGTM FT ICQLEETEKRKALELLLDKYSPEDKKVGLKYIEKSFHRTHVLKLVIKVISGKCKKINQP FT CQDY" FT CDS 436077..436664 FT /transl_table=11 FT /locus_tag="BF9343_0351" FT /old_locus_tag="BF0360" FT /product="putative NapC/NirT cytochrome c-type protein" FT /note="Similar to Wolinella succinogenes cytochrome c-type FT protein NrfH SWALL:NRFH_WOLSU (SWALL:Q9S1E6) (177 aa) fasta FT scores: E(): 4.8e-22, 38.18% id in 165 aa, and to FT Bacteroides thetaiotaomicron quinol oxidase BT1418 FT SWALL:AAO76525 (EMBL:AE016931) (198 aa) fasta scores: E(): FT 1.4e-63, 73.71% id in 194 aa, and to Sulfurospirillum FT deleyianum quinol oxidase NrfH SWALL:Q8VM54 (EMBL:AJ133037) FT (177 aa) fasta scores: E(): 5.2e-24, 40.25% id in 159 aa" FT /db_xref="GOA:Q5LI96" FT /db_xref="InterPro:IPR005126" FT /db_xref="InterPro:IPR011031" FT /db_xref="InterPro:IPR017571" FT /db_xref="InterPro:IPR024717" FT /db_xref="UniProtKB/TrEMBL:Q5LI96" FT /protein_id="CAH06130.1" FT /translation="MKVKEYIQWLLPSRKWRVLAIIITGVIVGGGALFLYMLRAHTYLA FT DDPSACVNCHIMGPYYATWFHSSHSRNATCNDCHVPHENPVKKWVFKGMDGMRHVAVFL FT TRGEKDVLRANKESAEVIMNNCIRCHTLLNTEFVNTGRIDYMMSQVGEGKACWDCHRDV FT PHGGSNSAASTPDALVPYPDSPTPEWLRKMIE" FT misc_feature 436077..436211 FT /note="Signal peptide predicted for BF0360 by SignalP 2.0 FT HMM (Signal peptide probability 0.830) with cleavage site FT probability 0.608 between residues 45 and 46" FT misc_feature 436107..436586 FT /note="Pfam match to entry PF03264 Cytochrome_NNT, FT NapC/NirT cytochrome c family, N-terminal region, score FT 44.8, E-value 1.7e-10" FT misc_feature 436227..436244 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature 436299..436316 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT CDS 436688..438169 FT /transl_table=11 FT /gene="nrfA" FT /locus_tag="BF9343_0352" FT /old_locus_tag="BF0361" FT /product="putative exported cytochrome c552" FT /EC_number="1.7.2.2" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 cytochrome c552 precursor NrfA or B4070 or Z5669 or FT ECS5052 SWALL:NRFA_ECOLI (SWALL:P32050) (478 aa) fasta FT scores: E(): 5.1e-82, 46% id in 450 aa, and to Bacteroides FT thetaiotaomicron cytochrome c552 precursor BT1417 FT SWALL:AAO76524 (EMBL:AE016931) (493 aa) fasta scores: E(): FT 1.3e-170, 83.53% id in 492 aa, and to Pasteurella multocida FT cytochrome c552 precursor NrfA or pm0023 SWALL:NRFA_PASMU FT (SWALL:Q9CPL4) (510 aa) fasta scores: E(): 2.2e-87, 48.77% FT id in 449 aa" FT /db_xref="GOA:Q5LI95" FT /db_xref="HSSP:1FS7" FT /db_xref="InterPro:IPR003321" FT /db_xref="InterPro:IPR011031" FT /db_xref="InterPro:IPR017570" FT /db_xref="UniProtKB/Swiss-Prot:Q5LI95" FT /protein_id="CAH06131.1" FT /translation="MEKKLKSWQGWLLFCGAMAVVFVLGLVVSSLMERRAETVSVFNNK FT RVEITGIEARNEVFGENYPRQYETWKETAKTDFKSEFNGNEAVDVLEQRPEMVVLWAGY FT AFSKDYSTPRGHMHAIEDITHSLRTGAPMDDKSGPQPSTCWTCKSPDVPRMMEAIGVDS FT FYNNKWGAFGSEIVNPIGCADCHEPTNMKLHISRPALREAFARQGKDIDKATPQEMRSL FT VCAQCHVEYYFKGDGKYLTFPWDKGFSVEDMEAYYDEADFADYTHALSKARILKAQHPD FT YEISQMGIHAQRGVSCADCHMPYKSEGGMKFSDHHIQSPLAMIDRTCQVCHRESEETLR FT NNVYDRQRKANEIRGRLEQELAKAHIEAKFAWDKGATDVQMAEALKLIRQAQWRWDFGV FT ASHGGAFHAPQEIQRILGHGLDKALQARLAISKVLAQHGYTADVPMPDISTKEKAQEYI FT GLDMEKERKAKDKFLKTIVPEWLEKARANGRLAKL" FT misc_feature 436688..436792 FT /note="Signal peptide predicted for BF0361 by SignalP 2.0 FT HMM (Signal peptide probability 0.901) with cleavage site FT probability 0.206 between residues 35 and 36" FT misc_feature 436829..438157 FT /note="Pfam match to entry PF02335 cytochr_c552, Cytochrome FT c552, score 687.9, E-value 4.1e-204" FT misc_feature 437231..437248 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature 437357..437374 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature 437576..437593 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature 437669..437686 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT CDS 438173..439414 FT /transl_table=11 FT /locus_tag="BF9343_0353" FT /old_locus_tag="BF0362" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT1416 SWALL:AAO76523 (EMBL:AE016931) FT (411 aa) fasta scores: E(): 7e-102, 61.25% id in 413 aa, FT and to Chlorobium tepidum hypothetical protein CT1560 FT SWALL:Q8KC66 (EMBL:AE012912) (414 aa) fasta scores: E(): FT 1.6e-32, 28.67% id in 408 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT1604 FT SWALL:AAO76711 (EMBL:AE016932) (292 aa) fasta scores: E(): FT 2.3e-12, 26.4% id in 231 aa" FT /db_xref="GOA:Q5LI94" FT /db_xref="InterPro:IPR007816" FT /db_xref="UniProtKB/TrEMBL:Q5LI94" FT /protein_id="CAH06132.1" FT /translation="MWQKPWGYKEGFAICGGLFLTGTFLQITIGKCELSILSYPMNVCV FT GVLYLVILLLIYAFSQKSYFIRWMGSCQAAVSSMVSVAMLTVVMGLIRQVKSDVPLLGA FT ESWLGFSQMLSACSFVLLFLWMITLLGLTTIRRIHHFRWCDFPFVLNHLGLFLALTGAI FT LGNADMERLRMTTKTGQAEWRALDENQKMRELPLAIELQDFTIDEYPPKLMLINNETGE FT ALPSKKPENLLIEENFHTGRLLDWEIGIEKKIPLAASVATQDTLNFVEFHSMGATYAVY FT LKAVNNKTGQQREGWVSCGSFMFPYKAIRLDDQTSLVMPEREPRRFASEVKVYTESGCR FT DSATIEVNKPFELEGWKIYQLSYDESKGRWSDISVFELVRDPWLPVVYTGIWMMIAGAV FT CLFALSQKRKEDNT" FT misc_feature order(438206..438259,438287..438355,438392..438451, FT 438509..438577,438614..438673,439319..439387) FT /note="6 probable transmembrane helices predicted for FT BF0362 by TMHMM2.0 at aa 12-29, 39-61, 74-93, 113-135, FT 148-167 and 383-405" FT CDS 439411..440202 FT /transl_table=11 FT /locus_tag="BF9343_0354" FT /old_locus_tag="BF0363" FT /product="putative cytochrome c biogenesis protein" FT /note="C-terminus is similar to Chlamydomonas reinhardtii FT cytochrome c biogenesis protein CcsA SWALL:CCSA_CHLRE FT (SWALL:P48269) (353 aa) fasta scores: E(): 4.6e-13, 31.03% FT id in 232 aa, and to Bacteroides thetaiotaomicron FT cytochrome c biogenesis protein CcsA BT1415 SWALL:AAO76522 FT (EMBL:AE016931) (263 aa) fasta scores: E(): 3e-92, 80.98% FT id in 263 aa, and to Bacteroides thetaiotaomicron FT cytochrome c biogenesis protein BT1605 SWALL:AAO76712 FT (EMBL:AE016932) (261 aa) fasta scores: E(): 1.4e-62, 57.57% FT id in 264 aa" FT /db_xref="GOA:Q5LI93" FT /db_xref="InterPro:IPR002541" FT /db_xref="UniProtKB/TrEMBL:Q5LI93" FT /protein_id="CAH06133.1" FT /translation="MSWDQFVIFAIVALLCWGIGAVAAWRGKRQWMVYTATLAGLAVFF FT AFILGMWISLERPPMRTMGETRLWYSFFLPLAGIITYSRWRYKWILSFSFILSLVFVCI FT NLFKPEIHNKTLMPALQSPWFAPHVIVYMFAYAMLGAAAVMAVYLLWIKKKTPEEREME FT LCDNLVNVGLAFMTLGMLFGALWAKEAWGHYWSWDPKETWAAATWLGYLCYIHFRMNRR FT QKVRTALVGLLICFVLLQMCWYGINYLPSAQGTSVHTYNLN" FT misc_feature order(439423..439482,439501..439569,439612..439665, FT 439678..439737,439795..439863,439912..439971, FT 440014..440070,440089..440157) FT /note="8 probable transmembrane helices predicted for FT BF0363 by TMHMM2.0 at aa 5-24, 31-53, 68-85, 90-109, FT 129-151, 168-187, 202-220 and 227-249" FT misc_feature 439597..440112 FT /note="Pfam match to entry PF01578 CytC_asm, Cytochrome C FT assembly protein, score 24.9, E-value 0.00016" FT CDS 440235..441500 FT /transl_table=11 FT /locus_tag="BF9343_0355" FT /old_locus_tag="BF0364" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT1414 SWALL:AAO76521 (EMBL:AE016931) (428 aa) FT fasta scores: E(): 1.9e-102, 58.29% id in 434 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LI92" FT /protein_id="CAH06134.1" FT /translation="MRITNLFWTVVLLAPLSVFAQQQKENLFTIDAQIRTRGEYRNGVL FT NPRPEGEEPTFFVNERARLSLGYQRDRLQMRLSAQHVGVWGQDPQIDKNGRFILHEAWA FT RLDFSKGLFAQLGRQPLSYDDERLLGGLDWNVAGRFHDALKLGYESKLHKLHLILAFNQ FT NDENRSYGGTYYASGAQPYKTMQTVWYNGHWAKDFTVSLLFMNTGFETGTEGNGKTANM FT QTMGTYWVYTPGAWLFNGSAYYQFGKNKADKKVSAYMFSLKAGYKIDPKWSVSLGTDYL FT SGDPDSKKVSTFDPLYGTHHKFYGGMDYFYASAYNKGLWDKILSVDFKPTKKLSFSLNY FT HHFSTTYDVMATDGKEGRCLGSELDMQVDYTLMKDVKLTAGYSTMLGTKYMDIVKGGNH FT KSWQDWGWLTLNINPRILFTKW" FT misc_feature 440235..440294 FT /note="Signal peptide predicted for BF0364 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.997 between residues 20 and 21" FT misc_feature 440868..440891 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 441547..442233 FT /transl_table=11 FT /locus_tag="BF9343_0356" FT /old_locus_tag="BF0365" FT /product="putative FNR-family transcriptional regulatory FT protein" FT /note="Similar to Pseudomonas stutzeri FNR family DnrE FT protein SWALL:Q9X7J7 (EMBL:AJ131716) (231 aa) fasta scores: FT E(): 4.3e-05, 22.82% id in 184 aa, and to Bacteroides FT thetaiotaomicron putative transcription regulator BT1413 FT SWALL:AAO76520 (EMBL:AE016931) (229 aa) fasta scores: E(): FT 1.9e-42, 51.73% id in 230 aa, and to Bacteroides FT thetaiotaomicron cAMP-binding domain BT0688 SWALL:AAO75795 FT (EMBL:AE016928) (222 aa) fasta scores: E(): 1.9e-17, 31.22% FT id in 205 aa" FT /db_xref="GOA:Q5LI91" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018490" FT /db_xref="UniProtKB/TrEMBL:Q5LI91" FT /protein_id="CAH06135.1" FT /translation="MVKVEFTDEYQKILWQISLFKDMDNSLQRRLPQELELSVYEVARK FT EIVLKQDTYCNHLYVLLKGELEVNIVDVAGNLVKVEDIRAPRAFATPHLFGDKNLLPAT FT FTASEDSVLLMATRSSVFKLISSVPDLLHRFLCVTGNCNKCTVTRLRILSYKMLRSRLV FT YYFMEHKISPDTALLEHNQVQLAEYLGVTRPALSKEINKMMKEGLISINKKVVTLEDMA FT ALKEYI" FT misc_feature 441652..441936 FT /note="Pfam match to entry PF00027 cNMP_binding, Cyclic FT nucleotide-binding domain, score 23.6, E-value 0.00025" FT misc_feature 442084..442149 FT /note="Predicted helix-turn-helix motif with score FT 1862.000, SD 5.53 at aa 180-201, sequence FT HNQVQLAEYLGVTRPALSKEIN" FT CDS complement(442245..444128) FT /transl_table=11 FT /locus_tag="BF9343_0357" FT /old_locus_tag="BF0366" FT /product="putative beta-lactamase/acylhydrolase" FT /note="Similar to the C-terminus of Bacteroides fragilis FT sialate O-acetylesterase EstA SWALL:BAC56897 FT (EMBL:AB102772) (220 aa) fasta scores: E(): 8e-27, 41.82% FT id in 208 aa, and to the N-terminus of Escherichia coli FT hypothetical protein YfeW precursor or B2430 FT SWALL:YFEW_ECOLI (SWALL:P77619) (434 aa) fasta scores: E(): FT 3.3e-26, 31.6% id in 386 aa, and to the N-terminus of FT Salmonella typhi hypothetical protein YfeW precursor or FT STY2716 or t0381 SWALL:AAO68099 (EMBL:AL627274) (432 aa) FT fasta scores: E(): 2.9e-25, 31.38% id in 427 aa. CDS may be FT a fusion protein." FT /db_xref="GOA:Q5LI90" FT /db_xref="InterPro:IPR001087" FT /db_xref="InterPro:IPR001466" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR013830" FT /db_xref="InterPro:IPR013831" FT /db_xref="UniProtKB/TrEMBL:Q5LI90" FT /protein_id="CAH06136.1" FT /translation="MENKINFSPPSTREGKGVRFLLTTFSILLCSLQAVAQSLPRVAPE FT QVGMDSHRLLHADEAIHRAIDHKEIPGAVLAVIRHGKMAYLKAYGNKRIYPNVEPMEIN FT TVFDMASCSKSMSTAVSVMILVERGQLRLLDRVSFYLPDFQEWRGENGEKKDIRIIDLM FT THTSGLPPYAPVSELQEKYGSPNPKGLMEYISTCKREFKPQTKFQYSCLNYITLQHIIE FT TITGQSLRDFAKENIFDILGMQYTDYLPTIQQQDGKWINTVACPWMDRIAPTEKQKDGS FT VLCGQVHDPLARILNGGISGNAGIFSNANDIGILAAALLNGGEYNGHRILSPLGVKTMC FT TVPRELTAFGRTPGWDIFSPYASNKGDLFSPNTFGHTGYTGTSIIIDPDNDTAVILLVN FT AVHPEDRHSIVRLRSLVANAVAASICPPAQVYTDHYYKRFLQFETETPISPKDIVMVGN FT SLTENGGNWSKRLNKKNIRNRGIIGDEALGICQRLFQILPGTPQKLFLMAGINDVSHDL FT STDSVVSLITKVIEKIQTESPRTKLYIQSLLPINESFGRYKTMTGKTDLIPEINRKLEA FT LAKEKKIPFIHLFPLFTEKNSNVMRKELTTDGLHLTEEGYRIWSKALKRYL" FT misc_feature complement(442260..442772) FT /note="Pfam match to entry PF00657 Lipase_GDSL, GDSL-like FT Lipase/Acylhydrolase, score 37.4, E-value 2.8e-08" FT misc_feature complement(442875..443960) FT /note="Pfam match to entry PF00144 beta-lactamase, FT Beta-lactamase, score 218.9, E-value 6.3e-63" FT CDS complement(444161..445006) FT /transl_table=11 FT /locus_tag="BF9343_0358" FT /old_locus_tag="BF0367" FT /product="putative glucokinase/SIS domain protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT sugar phosphate isomerase BT0133 SWALL:AAO75240 FT (EMBL:AE016926) (277 aa) fasta scores: E(): 4.4e-82, 84.64% FT id in 267 aa, and to Thermoanaerobacter tengcongensis FT predicted sugar phosphate isomerase TTE0212 SWALL:Q8RD35 FT (EMBL:AE012994) (306 aa) fasta scores: E(): 4.3e-42, 50.79% FT id in 252 aa, and to Salmonella typhi putative phophosugar FT binding protein STY2817 or t0286 SWALL:AAO68011 FT (EMBL:AL627275) (297 aa) fasta scores: E(): 4.9e-41, 48.3% FT id in 265 aa" FT /db_xref="GOA:Q5LI89" FT /db_xref="HSSP:1NRI" FT /db_xref="InterPro:IPR001347" FT /db_xref="InterPro:IPR005486" FT /db_xref="InterPro:IPR005488" FT /db_xref="UniProtKB/Swiss-Prot:Q5LI89" FT /protein_id="CAH06137.1" FT /translation="MNSNIEKSDKPSFIKISEQPSLYDDLEKKSVREILEDINKEDQKV FT AIAVQKAIPQIEKLVTQIVPRMKQGGRIFYMGAGTSGRLGVLDASEIPPTFGMPPTLII FT GLIAGGDTALRNPVENAEDNTTRGWEELTEHNINDKDTVIGIAASGTTPYVIGAMHAAR FT EHGILTGCITSNPNSPMAAEADIPIEMIVGPEYVTGSSRMKSGTGQKMILNMITTSVMI FT QLGRVKGNKMVNMQLSNRKLVDRGTRMIIEELGLEYDKAKALLLMHGSVKKAIDAYKAG FT " FT misc_feature complement(444341..444817) FT /note="Pfam match to entry PF01380 SIS, SIS domain, score FT 32.5, E-value 8.1e-07" FT misc_feature complement(444377..444430) FT /note="PS01272 Glucokinase regulatory protein family FT signature." FT CDS complement(445030..445866) FT /transl_table=11 FT /locus_tag="BF9343_0359" FT /old_locus_tag="BF0368" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3618 SWALL:AAO78723 (EMBL:AE016941) FT (283 aa) fasta scores: E(): 1.6e-73, 67.14% id in 277 aa" FT /db_xref="InterPro:IPR002731" FT /db_xref="UniProtKB/TrEMBL:Q5LI88" FT /protein_id="CAH06138.1" FT /translation="MILIADSGSTKTDWCVVEHGQLIQQISTKGTNPFFQSEEEISNEI FT ATALIPQLKTNKFEAVHFYGAGCAFPDKIETMRKAIASHLQVSGEIEVSTDMLAAARSL FT CGHQPGIACIMGTGSNSCYYDGKNIVTNVSPLGFILGDEGSGAVLGKLLVGDILKNQMT FT PGLKEKFLEQFNLTPAEIIDRVYRKPFPNRFLASFSPFLVQHLDEPVIRELVLNSFKKF FT LKRNVMQYDYQHAPVHFIGSVAFYYRELLSEACKIMGVHLGTIIQSPMEGLIKFHE" FT CDS complement(445863..447026) FT /transl_table=11 FT /locus_tag="BF9343_0360" FT /old_locus_tag="BF0369" FT /product="putative transmembrane protein" FT /note="Similar to Leptospira interrogans conserved FT hypothetical protein La0773 SWALL:Q8F816 (EMBL:AE011263) FT (381 aa) fasta scores: E(): 1.5e-17, 34.39% id in 407 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT3619 SWALL:AAO78724 (EMBL:AE016941) (372 aa) FT fasta scores: E(): 6.7e-75, 71.13% id in 388 aa, and to FT Anabaena sp. hypothetical protein ALL1887 SWALL:Q8YVT7 FT (EMBL:AP003587) (375 aa) fasta scores: E(): 5e-32, 34.66% FT id in 401 aa" FT /db_xref="GOA:Q5LI87" FT /db_xref="InterPro:IPR012429" FT /db_xref="UniProtKB/TrEMBL:Q5LI87" FT /protein_id="CAH06139.1" FT /translation="MNQTVNKRLLALDVLRGITIAGMIMVNNPGSWSYVYAPLGHAAWI FT GLTPTDLVFPFFMFIMGISTYISLRKYNFEFSHSAALKILKRTIVIFAIGLGIAWFSMF FT CRTWNSLSGEDISFFSRLYESVWTFGHIRILGVMQRLALCYGATAIIALIMKHKYIPYL FT IAILLIGYFIILINGNGFEYNSSNILSIVDRTVLGEAHMYKDNGIDPEGLLSTIPSIAH FT VLIGFCVGKLLMEVKDIHEKIERLFLIGTILTFAGFLLSYGCPISKKIWSPTFAIVTCG FT LASSFLALLVWIIDVRGYTRWSRFFESFGVNPLFIYVMGAVLSILLGSILIPYDGGSIS FT LHGFVYNAILQPVLGDYPGSLAFAILFVGLNWCIGYILYKKKIYIKI" FT misc_feature complement(order(445890..445958,446016..446084, FT 446145..446204,446232..446291,446325..446393, FT 446484..446552,446565..446633,446697..446765, FT 446826..446894,446922..446990)) FT /note="10 probable transmembrane helices predicted for FT BF0369 by TMHMM2.0 at aa 13-35, 45-67, 88-110, 132-154, FT 159-181, 212-234, 246-265, 275-294, 315-337 and 357-379" FT CDS complement(447035..449905) FT /transl_table=11 FT /locus_tag="BF9343_0361" FT /old_locus_tag="BF0370" FT /product="putative FAD-binding oxidoreductase" FT /note="Similar to Vibrio vulnificus Fe-S oxidoreductase FT VV20801 SWALL:Q8D5V2 (EMBL:AE016810) (946 aa) fasta scores: FT E(): 4e-154, 45.02% id in 944 aa, and to Vibrio cholerae FT oxidoreductase/iron-sulfur cluster-binding protein VCA0985 FT SWALL:Q9KKW5 (EMBL:AE004425) (959 aa) fasta scores: E(): FT 6.9e-151, 44.14% id in 956 aa, and to Pseudomonas FT aeruginosa probable ferredoxin PA4772 SWALL:Q9HV36 FT (EMBL:AE004890) (938 aa) fasta scores: E(): 1e-118, 44.86% FT id in 954 aa, and to Pseudomonas putida D-lactate FT dehydrogenase, putative PP4737 SWALL:AAN70309 FT (EMBL:AE016791) (936 aa) fasta scores: E(): 2.4e-118, 45.4% FT id in 958 aa" FT /db_xref="GOA:Q5LI86" FT /db_xref="InterPro:IPR004113" FT /db_xref="InterPro:IPR006094" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR016164" FT /db_xref="InterPro:IPR016166" FT /db_xref="InterPro:IPR016167" FT /db_xref="InterPro:IPR016168" FT /db_xref="InterPro:IPR016171" FT /db_xref="InterPro:IPR017896" FT /db_xref="UniProtKB/TrEMBL:Q5LI86" FT /protein_id="CAH06140.1" FT /translation="MKMERNYSAFLQDIGRFIPRDRLFTDELHRLAWGTDAGFYRLIPQ FT IVIHSINDDEVIEIIYLADRYNIPVTFRAAGTSLSGQAISDSVLIIAGKGWENYELSPD FT HEKIYLEPGIVGQRVNEILAPYGRKFAPDPASIKSAMVGGIVMNNASGMNCGTHANSDK FT MLLSVHIIFPDGYYLNTDSQESRENFKEDYPEFLQRICELRDQIRSNEKLSARIRHKYS FT IKNVTGLNILPFLVYDDPFDIIAHLMVGSEGTLAFLAGVTMKTEYDYPYKASAMLYFSD FT IKEACRAVVAMKRLVNANGEWIVKGAELLDWKSLASVNDPTGEGLTAVLTETKACTQEE FT LNQNIAIIEEALKAFDTYIPVHFTDQPEEYSKYWAIRAGIFPSVGGTRPSGTTCLIEDV FT AFHIEDLPEATAELQQLIARHGYDDACIYGHALEGNYHFIINQSFSSEAEVKRYEALMN FT DVIDLVVDKYDGSLKAEHGTGRNMAPFVEYEWGEEAYAIMKEVKQLFDPKGLFNPGVIF FT NDDPQCHIKHFKPLSPLTIGQDTQVTRQIDRCIECGFCEVNCLSCGFTLSSRQRIVIQR FT EISRLKKSGENPQLLETLSELYRYSGNRTCAGDGLCAMSCPMGINTGDLTHILRQAEFP FT PGSTGYRAGKFAANHFAGIKSTLRPVLSLANAAHSLLGTSTMTSITRKMHSAWGLPQWT FT PAMPKSYKIRKSDQTPAMNNKVVYFPSCINQTMGLAKDSPVDQPLVKQMLSLLQKAGYE FT VIFPPKMEKLCCGTIWESKGMLDIADSKSTELEAALWEASEQGRYPVLCDQSPCLHRMR FT ATIQKIKLYEPAEFIYTFLRDKLEFTPTDRPIAIHITCSMRKMGLANILISLAKLCSTQ FT VFIPEEVGCCGFAGDKGFTQPELNTYALRKLRPQLTKAGIGIGYSNSRTCEIGLATNTG FT IPYVSIAYLVDQCTRPIKQENNLTLK" FT misc_feature complement(448358..449104) FT /note="Pfam match to entry PF02913 FAD-oxidase_C, FAD FT linked oxidases, C-terminal domain, score 162.9, E-value FT 4.8e-46" FT misc_feature complement(449144..449776) FT /note="Pfam match to entry PF01565 FAD_binding_4, FAD FT binding domain, score 120.0, E-value 3.8e-33" FT CDS complement(449941..451215) FT /transl_table=11 FT /locus_tag="BF9343_0362" FT /old_locus_tag="BF0371" FT /product="conserved hypothetical exported protein" FT /note="Similar to Oceanobacillus iheyensis hypothetical FT conserved protein OB1304 SWALL:Q8ERJ8 (EMBL:AP004597) (509 FT aa) fasta scores: E(): 1.8e-64, 45% id in 420 aa, and to FT Bacillus halodurans hypothetical protein BH0674 FT SWALL:Q9KF23 (EMBL:AP001509) (418 aa) fasta scores: E(): FT 3.1e-63, 43.26% id in 423 aa, and to Bacillus subtilis FT hypothetical protein YbbC precursor SWALL:YBBC_BACSU FT (SWALL:P40407) (414 aa) fasta scores: E(): 9.8e-63, 43.02% FT id in 423 aa" FT /db_xref="InterPro:IPR008302" FT /db_xref="UniProtKB/TrEMBL:Q5LI85" FT /protein_id="CAH06141.1" FT /translation="MTYRRSILKLLLTFFVFMTSTLLSRGAEPGARPPRIRIKTGIEVL FT KEQNFKCLEGKRVGLITNPTGVDNHLISTIDILHEAPNVNLVALYGPEHGVRGDVHAGD FT KVDNANDSSTGLPVYSLYGKTRKPTPEMLKDIDVLVYDIQDIGCRSFTYISTMGVAMEA FT AAENNKEFIVLDRPNPIGGLKIEGNVVEDGYISFVSQFKIPYLYGLTCGELALMLNGEQ FT MLSKPCNLHVVKMKGWKRKMDYVQTGLQWIPSSPHIPHPHSAFFYPVSGILGELGYMSI FT GVGYTIPFQMFAARWVEAEKLADNLNRLHLPGVIFRPMHLKPFYSVGKEEHLQGVQVHI FT VDFNKASLSEIQFYVMQEVTALYPDRAVFDHADKERFHMFDLVSGSKEIRERFSQRNRW FT EDVRDYWYKDVDDFRRLSQKYYLYK" FT misc_feature complement(451138..451215) FT /note="Signal peptide predicted for BF0371 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.596 between residues 26 and 27" FT CDS complement(451257..452555) FT /transl_table=11 FT /locus_tag="BF9343_0363" FT /old_locus_tag="BF0372" FT /product="putative transmembrane permease" FT /note="Similar to Pseudomonas aeruginosa permease for AmpC FT beta-lactamase expression AmpG or pa4393 SWALL:Q9X3S5 FT (EMBL:AF082985) (594 aa) fasta scores: E(): 9.5e-09, 29.61% FT id in 260 aa, and to Bacteroides thetaiotaomicron AmpG FT protein, beta-lactamase induction signal transducer BT3620 FT SWALL:AAO78725 (EMBL:AE016941) (393 aa) fasta scores: E(): FT 7.2e-94, 59.28% id in 393 aa, and to Bacteroides FT thetaiotaomicron putative signal transducer BT1034 FT SWALL:AAO76141 (EMBL:AE016930) (443 aa) fasta scores: E(): FT 2.3e-26, 36.32% id in 435 aa" FT /db_xref="GOA:Q5LI84" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q5LI84" FT /protein_id="CAH06142.1" FT /translation="MKNKNISPWAWIPTLYFAQGLPYVAVMTISVIMYKNLGISNTDIA FT LYTSWLYLPWVIKPFWSPFVDLLKTKRWWIVSMQLLVGAGLAGIAFTIPMSNFFQTTLA FT IFWLVAFSSATHDIAADGFYMLALNVQDQALYVGIRSTFYRIATIAGQGLLVMLAGGLE FT IWTGSIKYGWSITFFILAGLFLAFCLYHKCILPKPDSDKAVVGENSASAIFSGFIETFA FT SFFRKKQAGVAILFMLFYRFPEAQLVKLINPFLLDPIDKGGLGLTTAEVGLVYGTIGII FT GLTLGGIIGGICAAKGGLQKWLWPMAWSLSLTCLTFVYLGYFQPQNFVIINLCVFIEQF FT GYGFGFTAYMLYLIYYSDGEHKTAHYAICTAFMALGMMLPGMAAGWLQELIGYENFFIW FT VMVCCTATIAVCAFIKIDPNYGKKAEGIPQKTK" FT misc_feature complement(order(451314..451370,451398..451466, FT 451485..451553,451596..451652,451671..451739, FT 451881..451949,451986..452045,452088..452156, FT 452175..452243,452271..452339,452373..452426, FT 452454..452522)) FT /note="12 probable transmembrane helices predicted for FT BF0372 by TMHMM2.0 at aa 12-34, 44-61, 73-95, 105-127, FT 134-156, 171-190, 203-225, 273-295, 302-320, 335-357, FT 364-386 and 396-414" FT CDS complement(452571..453926) FT /transl_table=11 FT /locus_tag="BF9343_0364" FT /old_locus_tag="BF0373" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus subtilis amidase enhancer FT precursor LytB or CwbA SWALL:CWBA_BACSU (SWALL:Q02113) (705 FT aa) fasta scores: E(): 9.5e-06, 23.26% id in 374 aa, and to FT Bacteroides thetaiotaomicron amidase enhancer precursor FT BT3621 SWALL:AAO78726 (EMBL:AE016941) (459 aa) fasta FT scores: E(): 2e-85, 64.66% id in 467 aa, and to FT Synechococcus elongatus Tll0391 protein SWALL:Q8DLT7 FT (EMBL:AP005370) (389 aa) fasta scores: E(): 4.5e-08, 29.1% FT id in 378 aa" FT /db_xref="GOA:Q5LI83" FT /db_xref="InterPro:IPR013486" FT /db_xref="InterPro:IPR013693" FT /db_xref="UniProtKB/TrEMBL:Q5LI83" FT /protein_id="CAH06143.1" FT /translation="MKEPKVQVGILFEPQIKFILLTPYHINGEEVSGKQVVTYDNGHIL FT WQGHSYDELLFEPLHEKSDAFELQDVTIGINFHWERKENQRFIGALKIIVENKKLTGIN FT VIHVEDYLTSVISSEMSATASLELLKAHAVISRSWLLAGLSLPYSKDREKSNTTPEKVP FT YSTSSFPPLAQEAENKILIRWYERDAHTHFDVCADDHCQRYQGITRASTDMVRQAISAT FT RGEVLMSEGTICDARFSKCCGGAFEEFQYCWENIRHPYLSKQRDSKKATDLPDLCKEAE FT AERWIRTSPEAFCNTKDKKVLSQVLNNYDQETTDFYRWKVEYEQEELSKLILKRSGIDY FT GQILDLVPVERGTSGRLVRLKIIGTKRTMIIGKELEIRRTLSPSHLYSSAFIIDKVDVT FT NGIPDRFILTGAGWGHGVGLCQIGAAVMGEQGYTYDTILLHYYIGATIDKLY" FT CDS complement(join(453926..454855,454855..456318)) FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0365" FT /old_locus_tag="BF0375" FT /product="putative glycosyltransferase (pseudogene)" FT /note="Pseudogene. Similar to Bacteroides thetaiotaomicron FT putative glycosyltransferase BT3622 SWALL:Q8A1N7 FT (EMBL:AE016941) (814 aa) fasta scores: E(): 4.1e-158, FT 51.72% id in 814 aa, and to C-terminus of Methanosarcina FT mazei glycosyltransferase from codon 240 MM0652 FT SWALL:Q8PZ42 (EMBL:AE013289) (307 aa) fasta scores: E(): FT 6.2e-07, 27.82% id in 230 aa, and to C-terminus of FT Pyrococcus abyssi glycosyl transferase pyrab11600 or FT pab0772 from codon 242 SWALL:Q9UZI6 (EMBL:AJ248286) (298 FT aa) fasta scores: E(): 1.1e-06, 30.43% id in 207 aa. Note: FT This CDS contains a frameshift after residue 488" FT misc_feature complement(455077..455580) FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferase, score 86.8, E-value 3.7e-23" FT CDS complement(456342..458207) FT /transl_table=11 FT /locus_tag="BF9343_0366" FT /old_locus_tag="BF0376" FT /product="putative PQQ-binding exported phosphoesterase" FT /note="N-terminus is similar to the C-terminus of FT Methanobacterium thermoautotrophicum serine/threonine FT protein kinase related protein MTH1485 SWALL:O27529 FT (EMBL:AE000909) (407 aa) fasta scores: E(): 3.3e-16, 23.98% FT id in 321 aa, and N-terminus is similar to the C-terminus FT of Methanosarcina acetivorans cell surface protein ma3699 FT SWALL:Q8TJS8 (EMBL:AE011080) (2523 aa) fasta scores: E(): FT 2.3e-11, 28.14% id in 302 aa, and N-terminus is similar to FT the C-terminus of Bacteroides thetaiotaomicron conserved FT hypothetical protein with conserved domains BT3030 FT SWALL:AAO78136 (EMBL:AE016938) (824 aa) fasta scores: E(): FT 7.6e-11, 27.76% id in 353 aa" FT /db_xref="GOA:Q5LI82" FT /db_xref="InterPro:IPR002372" FT /db_xref="InterPro:IPR004843" FT /db_xref="InterPro:IPR011047" FT /db_xref="InterPro:IPR018391" FT /db_xref="UniProtKB/TrEMBL:Q5LI82" FT /protein_id="CAH06145.1" FT /translation="MNRRLSIFVIILFFLLPVAARAQVTGSFRFAQLTDIHLNPNNPKP FT TEDLKRSVEQINATPGVDFVLVTGDLTEEGDRTTMLVVKSILDRLKVKYYVIPGNHETK FT WSDSGCTAFSEIFGGERFKFEHKGFLFLGFNSGPLMRMAYGHVVPQDITWMKQEMDKVG FT KDKPVILVTHYPMQDGDVDNWYDVTDAVRPYNIRTFIGGHYHRNRFLSYDGIPGILTRS FT NLRDKNGSSGYSIFDITPDSIITYEQRIDEPMKRWTALSLTKSYYNRTGKAVKYPSFSV FT NKEYPQVKIGWQVQTGVGIYCSPALWKGRVYVGDDLGFLTCYTLKEGRKLWSFQSGKRI FT VGTPAATDGIVVFGSADHNIYGLDAVTGKERWRVTVAQPVLGAVTIEKGIAYIGGSDST FT FRAIRIKNGKVVWTYTGIKGYIETKPLVEGDKVIFGAWDNTLYALNKSNGKELWKWTGG FT LTRMHFSPAAVWPVAAHGKVFITDPQRAMTAISLKTGKTVWRTFQSMVRETIGLSANKN FT QIYSKTMNDSVVCYSTISDTPKEIWASNVGFGYEHAPSMQMEKDGIVFSSTKEGLIFAL FT DASTGQVLWKHKIGNSLINTVLPISRHQVLFTATSGETGLLEWKE" FT misc_feature complement(456411..456524) FT /note="Pfam match to entry PF01011 Bacterial_PQQ, PQQ FT enzyme repeat, score 31.2, E-value 2e-06" FT misc_feature complement(456846..456920) FT /note="Pfam match to entry PF01011 Bacterial_PQQ, PQQ FT enzyme repeat, score 24.6, E-value 2e-06" FT misc_feature complement(457050..457163) FT /note="Pfam match to entry PF01011 Bacterial_PQQ, PQQ FT enzyme repeat, score 32.7, E-value 7.1e-07" FT misc_feature complement(457587..458126) FT /note="Pfam match to entry PF00149 Metallophos, FT Calcineurin-like phosphoesterase, score 75.4, E-value FT 9.9e-20" FT misc_feature complement(458142..458207) FT /note="Signal peptide predicted for BF0376 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.973 between residues 22 and 23" FT CDS complement(458303..461374) FT /transl_table=11 FT /locus_tag="BF9343_0367" FT /old_locus_tag="BF0377" FT /product="possible exported xanthan FT lyase/N-acetylmuramoyl-L-alanine amidase" FT /note="Similar to Bacteroides thetaiotaomicron xanthan FT lyase BT0257 SWALL:AAO75364 (EMBL:AE016926) (970 aa) fasta FT scores: E(): 3.8e-79, 44.54% id in 1035 aa, and limited FT similarity to C-terminus of Bacillus sp. GL1 xanthan lyase FT Xly SWALL:Q9AQS0 (EMBL:AB037178) (930 aa) fasta scores: FT E(): 0.022, 31.48% id in 108 aa" FT /db_xref="GOA:Q5LI81" FT /db_xref="InterPro:IPR002508" FT /db_xref="InterPro:IPR003961" FT /db_xref="InterPro:IPR013783" FT /db_xref="UniProtKB/TrEMBL:Q5LI81" FT /protein_id="CAH06146.1" FT /translation="MKPILTSLILLLTAGLFPQAAATQELSKELRSQIGDFLNETARKE FT ISVGKIHIDSVNTEGNDLILFANINCSYIPFRTDNVSKIYQGIKALLPPELAKRKLQIR FT TDHHAIEELIPLALRNTRGRKIPTFSYKADTPLITRLSVPYTHTNGLQNRHIALWQSHG FT FYYESKLTRWEWQRARIFQTVEDLYTQSYVLPFLVPMLENAGATVLLPRERDPQTVEII FT VDNDRCRDGHSVYSELNGSKMWKNGEEAGFAHLKRMYKDFENPFREGTYRQVETTKKGT FT VSVAEWIPEIPRAGRYAVYISYKTVNNSTEDALYTVYHQGGKSQFKVNQQMGGGTWIYL FT GNFSFGIGKTDCKIVLSNQSAKEGRLVTADAVKIGGGYGNIARSISEEGATVNTKSSDT FT MITDTYHPKVQVNYPYEISGYPRFCEAARYWMQWAGIPDSVYSDSHGKNDYTDDYKSRG FT IWVNYLAGGSAANPTEKGLNIPVDMAFAFHSDAGTTYGDTIIGTLGIFHTSAYNGAYAN FT GASRYASRDLCDLVQSNIVKDVRTLYEPEWTRRGMWNQSYYEARVPRVPTMLLELLSHQ FT NFADMRYGLDPRFRFTVSRAIYKGILQFICSQYKMEYVVQPLPVDHMSLRFEEGNRIKL FT SWQPVDDPLETTAKADQYIVYTRIGDSDFDNGVIVNSPTYQTVIPSGVVCSFKVTALNK FT GGESFPSEILSIGKTFNDKGTVLIINGFDRVCAPADFTADADTLAGFLDELDHGVPYKT FT DISYIGPMKEFRRQIPWMDDDASGFGDSYGTHETMVIAGNTFDYPAIHGEAILKAGYSF FT TSCSDESIVHPDSSPKERETQICMNDYKYVDLILGKQCQTKMGRGGIRPLEFKTFSKEM FT QNAITNYCQAGGNFFVSGAYVASDLWDNRLVKANEEDKKFAMEVLKYKWRVGQAARNGK FT VKSVASPFPEITGSYTYYQDLNPESYVVESPDALEPAAQGAFTILRYSENNLSAGIAYK FT GNYKTCVLGFPFEAIRTVTERELLMKAILTFFEH" FT misc_feature complement(459557..459958) FT /note="Pfam match to entry PF01520 Amidase_3, FT N-acetylmuramoyl-L-alanine amidase, score -4.6, E-value FT 0.00017" FT misc_feature complement(461306..461374) FT /note="Signal peptide predicted for BF0377 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.657 between residues 23 and 24" FT CDS complement(461377..462834) FT /transl_table=11 FT /locus_tag="BF9343_0368" FT /old_locus_tag="BF0378" FT /product="putative cation symporter" FT /note="Similar to Homo sapiens sodium/iodide cotransporter FT slc5a5 or Nis SWALL:SL55_HUMAN (SWALL:Q92911) (643 aa) FT fasta scores: E(): 1.6e-18, 21.42% id in 406 aa, and to FT Bacteroides thetaiotaomicron sodium/iodide co-transporter FT BT3623 SWALL:AAO78728 (EMBL:AE016941) (495 aa) fasta FT scores: E(): 2.1e-156, 81.66% id in 480 aa, and to FT Bacteroides thetaiotaomicron Na+/solute symporter BT1082 FT SWALL:AAO76189 (EMBL:AE016930) (438 aa) fasta scores: E(): FT 9.6e-84, 49.07% id in 434 aa" FT /db_xref="GOA:Q5LI80" FT /db_xref="InterPro:IPR001734" FT /db_xref="UniProtKB/TrEMBL:Q5LI80" FT /protein_id="CAH06147.1" FT /translation="MTPVAVLITIAPYFLILFTISYIAGRKADNEGFFVGNRKSAWYVV FT AFAMIGSSISGVTFVSVPGMVGISNFSYLQMVLGFVTGQIIIAFVLIPLFYRMNLVSIY FT EYLENRFGTSSYKTGAWFFFISKILGAAVRLYLVCLTLQLLVFEPFHMPFIMNVILTVA FT LVWLYTFRGGVKSLIWTDSLKTFCLIVSVVLCIYYISTDLKLSFTEMFSTVSDSALSHM FT FFFDNVNDKRYFFKQFLAGVFTMIAMTGLDQDMMQRNLSCKNFKDSQKNMITSGISQFF FT IILLFLMLGVLLYTFTSHQGITNPAKSDELFPMIATGGYFPIIVGILFIIGLISSAYSA FT AGSALTALTTSFTVDILGIKGKTEDTVRKTRKKVHVGMAIVMGIVIFIFNLLNNTSVID FT AVYILASYTYGPILGLFAFGILTKRQVRDRYIPLVSILSPILCFILQKNSETWFHGYQF FT SYELLIFNALFTFIGLCFLIKKTINLT" FT misc_feature complement(order(461401..461469,461497..461550, FT 461569..461637,461647..461715,461827..461895, FT 461953..462021,462082..462138,462232..462291, FT 462325..462378,462421..462480,462541..462609, FT 462637..462705,462766..462825)) FT /note="13 probable transmembrane helices predicted for FT BF0378 by TMHMM2.0 at aa 4-23, 44-66, 76-98, 119-138, FT 153-170, 182-201, 233-251, 272-294, 314-336, 374-396, FT 400-422, 429-446 and 456-478" FT misc_feature complement(461551..462738) FT /note="Pfam match to entry PF00474 SSF, Sodium:solute FT symporter family, score -54.5, E-value 5.7e-07" FT CDS complement(462875..464044) FT /transl_table=11 FT /locus_tag="BF9343_0369" FT /old_locus_tag="BF0379" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2135 SWALL:AAO77242 (EMBL:AE016934) FT (387 aa) fasta scores: E(): 2.7e-68, 49.22% id in 386 aa, FT and to Clostridium acetobutylicum uncharacterized membrane FT protein, YbbC B.subtilis ortholog CAC0185 SWALL:Q97ML1 FT (EMBL:AE007531) (382 aa) fasta scores: E(): 2.2e-37, 36.76% FT id in 389 aa, and to Bacillus subtilis hypothetical protein FT YbbC precursor SWALL:YBBC_BACSU (SWALL:P40407) (414 aa) FT fasta scores: E(): 1.5e-36, 40.15% id in 391 aa" FT /db_xref="InterPro:IPR008302" FT /db_xref="UniProtKB/TrEMBL:Q5LI79" FT /protein_id="CAH06148.1" FT /translation="MKKILLIVVLLCSTLFAQAQKSDVIIGAEQTKAYFPILKNKRIAI FT FSNHTGMVGNKHLLDILLENNFNVVAIFSPEHGFRGNADAGEHVSSTIDSKTGVPILSL FT YNGKSKKPSEASMKKFDILIVDIQDVGLRFYTYYISMVRLMDACAEYDRKILILDRPNP FT NGHYVDGPILDMKYKSGVGGLPIPIVHGMTLGELALMVNGERWLPSSRICDVTVIPCKN FT YTHQTMYRLPIPPSPNLPNMKAIYLYPSICLFEGTPVSLGRGTTLPFQVYGHPNMTGYN FT YNFTPRSIPGAKNPPQLNKLCHGVNLSNLSDEEIWKKGINLDYLIDAYHNLNMGDRFFR FT PFFELLVGTDYVRKMIEGGKSADEIKARWKRDVERFKIQRKPYLLYQDN" FT misc_feature complement(463988..464044) FT /note="Signal peptide predicted for BF0379 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.945 between residues 19 and 20" FT CDS complement(464265..465962) FT /transl_table=11 FT /locus_tag="BF9343_0370" FT /old_locus_tag="BF0380" FT /product="conserved hypothetical lipoprotein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT1620 SWALL:AAO76727 (EMBL:AE016932) (618 aa) FT fasta scores: E(): 4.4e-22, 28.28% id in 640 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT0030 FT SWALL:AAO75137 (EMBL:AE016926) (609 aa) fasta scores: E(): FT 9.2e-22, 28.93% id in 636 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT0755 SWALL:AAO75862 FT (EMBL:AE016929) (601 aa) fasta scores: E(): 1.3e-16, 30.21% FT id in 609 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LI78" FT /protein_id="CAH06149.1" FT /translation="MKKIKYIACLLSLAVVSGCDSILDKGPLDSFTNDNFWTGEGNISG FT YANAFYEQFLGYGNGNGYGDFYFKTLSDDQAGMSFAKWTYPDNAPSTSAAWKNGWIEVR FT RANIMLENVPTVASLDEATKNHWLGVARLMRAWQYYHLVRMYGNLPWIDKALNINDEGE FT IYGNREDRDMVMDKVLEDLDFAVTNIKDIPSKTTWSRSLANAMKAEVCLYEGTFRKYRK FT NEDGQQAPDATGAARYLTACKEACLAVMSKGYKLNTSYQGNYNSTDLSSNPEMILYKAY FT KEGLLMHSTIDYTCSSTQISGMSKNAFESYLFKDGKPMALTSLNKSDEAPFQYGHLSLK FT AILAVRDKRLAQTIDTVLLYNGRGFTRFNTGMESTSSTGYGVAKYDNEAIPEGFRSQSG FT KNYTHAPLFWLSVIYLNYAEACAELGNITQDDLDKSINLLKDRAGLPHLNPIVGFSDPA FT NNHGVSDLIWEIRRERRCELMFDNDNRYWDLIRWHQLDKLDTTKYPDIILGANVANDMD FT GCEANKVGKYIDGSKDGSRIYDKKHYLYPIPTGQIALNPQLAPNNPGW" FT misc_feature complement(465906..465938) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature complement(465909..465962) FT /note="Signal peptide predicted for BF0380 by SignalP 2.0 FT HMM (Signal peptide probability 0.992) with cleavage site FT probability 0.944 between residues 18 and 19" FT CDS complement(465992..469327) FT /transl_table=11 FT /locus_tag="BF9343_0371" FT /old_locus_tag="BF0381" FT /product="putative exported protein" FT /note="Similar to Bacteroides fragilis fragilis regulatory FT region FrrG SWALL:Q8VTA9 (EMBL:AF329100) (1137 aa) fasta FT scores: E(): 2.2e-37, 28.34% id in 1122 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT2805 FT SWALL:AAO77911 (EMBL:AE016937) (1083 aa) fasta scores: E(): FT 2.3e-116, 36.57% id in 1091 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT4357 SWALL:AAO79462 FT (EMBL:AE016945) (1178 aa) fasta scores: E(): 3e-91, 36.88% FT id in 1109 aa" FT /db_xref="GOA:Q5LI77" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LI77" FT /protein_id="CAH06150.1" FT /translation="MNEDRKKRGLANSNLLIAMAITALIIGSSNAMANQTASGSSYKVT FT EQMQIQTVTGVVVDANGEPIIGASVVEKGTTNGIVTDMDGKFSLNVKVGTTLQITFVGY FT QPQDVKATKSMKVVLKEDNELLDEVVVVGYGTQKKANLTGAVSTVDVSKTLEARPQSDV FT SKALQGVVPGLTITNTSGKLNSKPTMTIRGTGTLSNSATSNPLIVVDGVPMDDISYLNT FT QDIDNISVLKDAASTSIYGTRAAFGVILVTTKSAKKTDKVTINYTNNFSWDTPTILPNY FT PDVATQARALRAANTRANLENELFGMYMDDNFIAKAEAWKQRHGGKKAGYREMIPGDDF FT DLGEDGSALYYADWDVVGIMFRDWKPAQSHNISIQGTSGKTSYFLSVGYNHEEGVMTFN FT PDKLNKYNANMNVTSDITNWLQIGGRFSYSDKAYTTPNTRRNTYTYMWRWGSFFGPYGT FT YQGIDMKNDIAYLKQAGDDKTNDSYTRIGAFLKATIIKGLTLNADYTFNINNKTTKSVG FT LPVICWNSWGGKLNTPTTAAGANGDTWVYQNSVRDNSYALNVFANYELTVAKDHHFNFM FT IGANAEEGEYQNHWSQRKGLLDDKLPEFNLATGDQTVGGTHNEWGTAGWFGRINYDYNG FT IWLLELNGRYDGSSKFPSSDRWAFFPSGSVGYRISEEKFFEPIKKVVSNTKIRASYGEI FT GNQAVGSNMYISTVSKRTDGNTHWLNGSNKVVAYDLPSLVSPTLKWERIQTLDIGGDFG FT FFNNELNISFDWYQRTTKDMLAPGQTMPDVLGAGAPKINAGTLRTRGWELSIDWRHHFN FT EVNVYANASIGDFKTVITKWDNDSQLLNENYSGKVYGDIWGFETDRYFTKDDFNADGSY FT KEGIASQKKLEQDGFVYGPGDIKFKDLNNDKEINGGEGTVKDHGDLKVIGNTTPRYQYG FT FRLGGEWKGIDIDMFFQGVGKCDAWTQSAFVMPMMRGADAIYANQANYWTDENPDPNAD FT FPRMWPGNAGKGTVSVLDLGNHNFYPQSKYLVNMAYLRFKNLTIGYTLPKDWTRKVYMD FT KVRVYFSANNICELINKSNAPVDPEVNTSEAIANGGSSDYGNGTWGRVDPMYRTVSFGL FT QVTF" FT misc_feature complement(465995..468907) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -12.5, E-value 0.00036" FT misc_feature complement(469229..469327) FT /note="Signal peptide predicted for BF0381 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.987 between residues 33 and 34" FT CDS complement(469789..470637) FT /transl_table=11 FT /locus_tag="BF9343_0372" FT /old_locus_tag="BF0382" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3618 SWALL:AAO78723 (EMBL:AE016941) FT (283 aa) fasta scores: E(): 6.6e-48, 46.4% id in 278 aa" FT /db_xref="InterPro:IPR002731" FT /db_xref="UniProtKB/TrEMBL:Q5LI76" FT /protein_id="CAH06151.1" FT /translation="MKLIAESGSTRTEWALVEDNHLVQRVFTEGLNPFFQTRREISRSV FT RLGLPESFFKKKLDQVYYYGAGCSSYEKKNILGASLVAQFKTPIQVESDLLAAARGLFK FT CEAGIACILGTGSNSCFYDGKIIVKNVKAAGYILGDEGSGAVLGKLFLADLLKGLAPKE FT LANEFHEKFRISVNDVMESVYNLPFPNRFLGTIAYFLGDYMDNEYVYNLLTNNLRSFFN FT RNVCQYDYINYPIRFVGSLAYAYPDILQEVAQEFGVEIDVIEETPMNGLIEFHSMNIEE FT S" FT CDS complement(470937..471947) FT /transl_table=11 FT /gene="asd" FT /locus_tag="BF9343_0373" FT /old_locus_tag="BF0384" FT /product="putative aspartate-semialdehyde dehydrogenase" FT /EC_number="1.2.1.11" FT /note="Similar to Legionella pneumophila FT aspartate-semialdehyde dehydrogenase Asd SWALL:DHAS_LEGPN FT (SWALL:O31219) (347 aa) fasta scores: E(): 1.2e-54, 48.06% FT id in 335 aa, and to Bacteroides thetaiotaomicron FT aspartate-semialdehyde dehydrogenase BT3636 SWALL:AAO78741 FT (EMBL:AE016941) (335 aa) fasta scores: E(): 8e-120, 96.41% FT id in 335 aa, and to Aquifex aeolicus FT aspartate-semialdehyde dehydrogenase AsD or AQ_1866 FT SWALL:DHAS_AQUAE (SWALL:O67716) (340 aa) fasta scores: E(): FT 5.1e-69, 58.45% id in 337 aa" FT /db_xref="GOA:Q5LI75" FT /db_xref="InterPro:IPR000534" FT /db_xref="InterPro:IPR005986" FT /db_xref="InterPro:IPR012080" FT /db_xref="InterPro:IPR012280" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q5LI75" FT /protein_id="CAH06152.1" FT /translation="MKVAIVGVSGAVGQEFLRVLDERNFPLDELVLFGSKRSAGTKYTF FT RGKQIEVKLLQHNDDFKGVDIAFTSAGAGTSKEFEKTITRYGAVMIDNSSAFRMDADVP FT LVVPEVNAADAKDRPRGVIANPNCTTIQMVVALKAIEELSHIKTVHVSTYQAASGAGAA FT AMDELYEQYRQVLANEPVTVEKFAYQLAFNLIPQIDVFTENGYTKEEMKMYNETRKIMH FT SDVKVSATCVRVPALRAHSESIWVETERPISIEEAREAFAKGEGLVLQDNPAEKEYPMP FT LFLAGKDPVYVGRIRKDLTNDCGLTFWIVGDQIKKGAALNAVQIAEYLIKEGNIG" FT misc_feature complement(471000..471551) FT /note="Pfam match to entry PF02774 Semialdhyde_dhC, FT Semialdehyde dehydrogenase, dimerisation domain, score FT 261.9, E-value 7.3e-76" FT misc_feature complement(471576..471947) FT /note="Pfam match to entry PF01118 Semialdhyde_dh, FT Semialdehyde dehydrogenase, NAD binding domain, score FT 169.6, E-value 4.5e-48" FT CDS 472145..474280 FT /transl_table=11 FT /locus_tag="BF9343_0374" FT /old_locus_tag="BF0385" FT /product="putative Na+/H+ antiporter" FT /note="Similar to Lactococcus lactis Na+/H+ antiporter FT homolog Nah SWALL:Q48731 (EMBL:X73329) (379 aa) fasta FT scores: E(): 3.5e-17, 24.54% id in 387 aa, and to FT Bacteroides thetaiotaomicron Na+/H+ anti-porter BT3638 FT SWALL:AAO78743 (EMBL:AE016941) (711 aa) fasta scores: E(): FT 0, 89.59% id in 711 aa, and to Chlorobium tepidum Na+/H+ FT antiporter, putative CT1144 SWALL:Q8KDB0 (EMBL:AE012875) FT (784 aa) fasta scores: E(): 7.1e-95, 37.86% id in 721 aa" FT /db_xref="GOA:Q5LI74" FT /db_xref="InterPro:IPR006016" FT /db_xref="InterPro:IPR006153" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:Q5LI74" FT /protein_id="CAH06153.1" FT /translation="MHWFDLSLQLPITDPTWVFFLVLIIILFAPMILGRLHIPHIIGMI FT LAGVVIGEYGFNVLERDSSFELFGKVGLYYIMFLAGLEMDMEDFKKNRTKGLVFGWFTF FT IIPMALGVWSSMELLGYGFTTAVLLASMYASHTLIAYPIISRYGLSRLRSVNITIGGTA FT VTVTLALIILAVIGGMYKGTVDGMFWVLLVVKVAFLSFLIVFFFPRIGRWFFRKYDDSV FT MQFVFVLAMVFLGSGLMEFVGMEGILGAFLAGLVLNRLIPHVSPLMNRLEFVGNALFIP FT YFLIGVGMIIDVRTLFTGGEALKVAVVMTVFATLSKWLAAWITQKIYHMQPNERSMMFG FT LSNAQAAATLAAVLIGHEIIMENGERLLNDDVLNGTVVMILFTCVISSLVTERSARRFA FT LHEEMQFEDNKEKTEQEQILIPVANPDTIEDLINLALVIRDTKQKKELIALNVINDNNN FT SENKELQGKRNLEKAAMIAASADVSVNMVSRYDLNIASGIIHTIKEYDATDVVIGLHRK FT ANIVDSFFGNLAESLLKGTHREVIIAKFLMPVNTLRRIIIAVPPKAEYETGFSKWVEHF FT CRMGSLLGCRVHFFANEQTLMRLQQLVKKKHGSTPTEFSRLDEWDDLLLLTGQVNFDHL FT LVVISARRGSISYDPSFERLPNQLGKYFSNNSLIILYPDQFGEPQEIVSFSDPRGYNES FT QHYDKVGKWFYKWLKKN" FT misc_feature order(472187..472255,472430..472483,472511..472579, FT 472604..472672,472700..472768,472805..472858, FT 472868..472927,472961..473029,473057..473110, FT 473159..473227,473255..473314) FT /note="11 probable transmembrane helices predicted for FT BF0385 by TMHMM2.0 at aa 15-37, 96-113, 123-145, 154-176, FT 186-208, 221-238, 242-261, 273-295, 305-322, 339-361 and FT 371-390" FT misc_feature 472190..473350 FT /note="Pfam match to entry PF00999 Na_H_Exchanger, FT Sodium/hydrogen exchanger family, score 119.0, E-value FT 7.8e-33" FT CDS 474280..474990 FT /transl_table=11 FT /locus_tag="BF9343_0375" FT /old_locus_tag="BF0386" FT /product="putative ThiF family protein" FT /note="Similar to Bacteroides thetaiotaomicron ThiF family FT protein, putative dinucleotide-utilizing enzyme involved in FT molybdopterin and thiamine biosynthesis BT3639 FT SWALL:AAO78744 (EMBL:AE016941) (238 aa) fasta scores: E(): FT 3.3e-78, 87.17% id in 234 aa, and to Fusobacterium FT nucleatum molybdopterin biosynthesis MoeB protein FN0725 FT SWALL:Q8RFH3 (EMBL:AE010583) (234 aa) fasta scores: E(): FT 6.3e-27, 40.61% id in 229 aa, and to Staphylococcus aureus FT hypothetical protein sav1628 or sa1455 or mw1578 FT SWALL:Q99TM1 (EMBL:AP003363) (257 aa) fasta scores: E(): FT 2.1e-25, 35% id in 240 aa" FT /db_xref="GOA:Q5LI73" FT /db_xref="InterPro:IPR000594" FT /db_xref="InterPro:IPR009036" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q5LI73" FT /protein_id="CAH06154.1" FT /translation="MENWQQRTELLLGAEKMERLRKSHVLVVGLGGVGAYAAEMICRAG FT VGRMTIVDADIVQPTNINRQLPATHATLGMEKAKVLEARFRDINPEIELTVLPVYLKDD FT NIPELLDAARYDFIVDAIDTISPKCYLIYHALQRRIKIISSMGAGAKSDITQVRFADLW FT DTYHCGLSKAVRKRLQKMGVKRKLPVVFSTEQADSKAVLLTDDERNKKSTCGTVSYMPA FT VFGCYLAEYVIKRL" FT misc_feature 474340..474750 FT /note="Pfam match to entry PF00899 ThiF, ThiF family, score FT 149.9, E-value 3.8e-42" FT misc_feature 474352..474420 FT /note="1 probable transmembrane helix predicted for BF0386 FT by TMHMM2.0 at aa 25-47" FT CDS 474995..475645 FT /transl_table=11 FT /locus_tag="BF9343_0376" FT /old_locus_tag="BF0387" FT /product="putative ABC transporter ATP-binding protein" FT /note="Similar to Bacteroides thetaiotaomicron lipoprotein FT releasing system ATP-binding protein BT3640 SWALL:AAO78745 FT (EMBL:AE016941) (218 aa) fasta scores: E(): 8.9e-64, 88.37% FT id in 215 aa, and to Methanosarcina mazei ABC transporter, FT ATP-binding protein MM2833 SWALL:Q8PT84 (EMBL:AE013533) FT (227 aa) fasta scores: E(): 3.2e-34, 48.62% id in 218 aa, FT and to Chlorobium tepidum ABC transporter, ATP-binding FT protein CT1474 SWALL:Q8KCE8 (EMBL:AE012904) (247 aa) fasta FT scores: E(): 5.8e-34, 50.66% id in 225 aa" FT /db_xref="GOA:Q5LI72" FT /db_xref="HSSP:1L2T" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR015854" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/Swiss-Prot:Q5LI72" FT /protein_id="CAH06155.1" FT /translation="MIHLEGITKSFGSLQVLKGIDLEITQGEVVSIVGPSGAGKTTLLQ FT IMGTLDSPDAGMINIDGTNVSRMKEKELSAFRNKHIGFVFQFHQLLPEFTALENVMIPA FT FIAGVPTKEASMRAMEILDFMGLKERASHKPNELSGGEKQRVAVARALINQPAVILADE FT PSGSLDSHNKEELHQLFFDLRNRFGQTFVIVTHDEALAKITDRTIHMVDGNII" FT misc_feature 475073..475633 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 206.1, E-value 4.5e-59" FT misc_feature 475094..475117 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 475406..475450 FT /note="PS00211 ABC transporters family signature." FT CDS complement(475646..476548) FT /transl_table=11 FT /locus_tag="BF9343_0377" FT /old_locus_tag="BF0388" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3641 SWALL:AAO78746 (EMBL:AE016941) FT (309 aa) fasta scores: E(): 3.9e-53, 53.39% id in 309 aa" FT /db_xref="GOA:Q5LI71" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR023097" FT /db_xref="UniProtKB/TrEMBL:Q5LI71" FT /protein_id="CAH06156.1" FT /translation="MWKDFFYFTRAERQGILILAVLCILVFVAGWLIPVKENTAKNDTE FT KFKKEYAGFMSSIREKEQKIYSHNNRFQPPRTVRLTTFDPNITDSVGFLDLGLPAWMAK FT NILKYRNKGGKFRRAEDFRKVYGLTQEQYEMLLPYIYIATLAKPKDTLRLYTRKIEEDT FT LNFFKYAAGTVVELNSADTTELKKIPGIGSGIAQMITGYRNRLGGFYDIAQLKEIHLDV FT EKLRPWFNVATSNTRRLNINRTGIERLKAHPYINFYQAKIIVEYRKKKGILKSLKQLSL FT YEEFTPQDLERISHYICFE" FT misc_feature complement(475943..476032) FT /note="Pfam match to entry PF00633 HHH, Helix-hairpin-helix FT motif, score 23.6, E-value 0.00039" FT misc_feature complement(476444..476512) FT /note="1 probable transmembrane helix predicted for BF0388 FT by TMHMM2.0 at aa 13-35" FT CDS complement(476551..477918) FT /transl_table=11 FT /locus_tag="BF9343_0378" FT /old_locus_tag="BF0389" FT /product="putative sodium-dependent transporter" FT /note="Similar to Staphylococcus epidermidis FT sodium-dependent transporter se2326 SWALL:Q8CMR4 FT (EMBL:AE016752) (416 aa) fasta scores: E(): 2.8e-52, 38.22% FT id in 429 aa, and to Bacteroides thetaiotaomicron FT Na+-dependent transporter BT3642 SWALL:AAO78747 FT (EMBL:AE016941) (456 aa) fasta scores: E(): 5.6e-164, FT 89.45% id in 455 aa, and to Vibrio parahaemolyticus FT putative sodium-dependent transporter vp1184 SWALL:BAC59447 FT (EMBL:AP005077) (476 aa) fasta scores: E(): 2.9e-76, 44.42% FT id in 448 aa" FT /db_xref="GOA:Q5LI70" FT /db_xref="InterPro:IPR000175" FT /db_xref="UniProtKB/TrEMBL:Q5LI70" FT /protein_id="CAH06157.1" FT /translation="MTKKERGNFGSKLGVILASAGSAVGLGNIWRFPYETGNHGGAAFI FT LIYLGCILLLGLPIMIAEFLIGRHSQANTARAYQILAPGTQWRWVGRMGVLAGFLILGY FT YSVVAGWTLEYIFEAVSNSFAGKTPAEFISSFQSFSSNPWRPALWLTLFLLATHFIIVK FT GVEKGIEKSSKIMMPTLFIIILILVGCSVTLPGAGKGIEFLLKPDFSKVDGNVFLGAMG FT QAFFSLSLGMGCLCTYASYFSKNTNLTRTAFSVGIIDTFVAVLAGFIIFPAAFSVGIQP FT DAGPSLIFITLPNVFQQAFSGIPILAYIFSVMFYVLLALAALTSTISLHEVVTAYLHEE FT FNFTRGKAARLVTTGCILLGILCSLSLGVTKEFTIFGLGMFDLFDFVTAKLMLPLGGLL FT ISIFTGWYLDKKLVWSEITNNGTLKVPTYKLIIFILKYVAPIAISVIFINELGLLK" FT misc_feature complement(476554..477903) FT /note="Pfam match to entry PF00209 SNF, FT Sodium:neurotransmitter symporter family, score 19.1, FT E-value 1.1e-21" FT misc_feature complement(order(476572..476640,476698..476766, FT 476809..476877,476938..477006,477097..477165, FT 477202..477270,477328..477396,477433..477486, FT 477568..477636,477718..477786,477829..477882)) FT /note="11 probable transmembrane helices predicted for FT BF0389 by TMHMM2.0 at aa 13-30, 45-67, 95-117, 145-162, FT 175-197, 217-239, 252-274, 305-327, 348-370, 385-407 and FT 427-449" FT CDS 478023..478415 FT /transl_table=11 FT /locus_tag="BF9343_0379" FT /old_locus_tag="BF0390" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3643 SWALL:AAO78748 (EMBL:AE016941) FT (130 aa) fasta scores: E(): 5.7e-49, 79.23% id in 130 aa, FT and to Neisseria meningitidis hypothetical protein NMB0794 FT SWALL:Q9K030 (EMBL:AE002433) (120 aa) fasta scores: E(): FT 1e-05, 32.52% id in 123 aa" FT /db_xref="GOA:Q5LI69" FT /db_xref="InterPro:IPR006976" FT /db_xref="UniProtKB/TrEMBL:Q5LI69" FT /protein_id="CAH06158.1" FT /translation="MLSYIKKYPVSLFIILAVIYLSFFKPPSTEISKIPNIDKVVHICM FT YFGMSGMLWLEFLRAHRRDHTPVWHAWVGAFICPVLFSGCVELLQEYCTTYRGGDWMDF FT AANTTGAVLASLIGYFIVRPRILSKK" FT misc_feature order(478041..478094,478137..478205,478224..478292, FT 478335..478388) FT /note="4 probable transmembrane helices predicted for FT BF0390 by TMHMM2.0 at aa 7-24, 39-61, 68-90 and 105-122" FT CDS complement(478420..479718) FT /transl_table=11 FT /gene="murF" FT /locus_tag="BF9343_0380" FT /old_locus_tag="BF0391" FT /product="putative FT UDP-N-acetylmuramoyl-tripeptide--D-alanyl-d-alanine ligase" FT /note="Similar to Bacteroides thetaiotaomicron FT UDP-N-acetylmuramoylalanyl-D-glutamyl-2, FT 6-diaminopimelate-d-alanyl-d-alanyl ligase BT3644 FT SWALL:AAO78749 (EMBL:AE016941) (432 aa) fasta scores: E(): FT 7.2e-140, 82.87% id in 432 aa, and to Cytophaga johnsonae FT MurF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine FT ligase UDP-MurNAc-pentapeptide synthetase)SWALL:Q8KRM7 FT (EMBL:AF527793) (428 aa) fasta scores: E(): 1.6e-63, 43.93% FT id in 437 aa, and to Escherichia coli FT UDP-N-acetylmuramoyl-tripeptide--D-alanyl-d-alanine ligase FT MurF or Mra or B0086 SWALL:MURF_ECOLI (SWALL:P11880) (452 FT aa) fasta scores: E(): 2.1e-39, 36.53% id in 438 aa" FT /db_xref="GOA:Q5LI68" FT /db_xref="InterPro:IPR000713" FT /db_xref="InterPro:IPR004101" FT /db_xref="InterPro:IPR005863" FT /db_xref="InterPro:IPR013221" FT /db_xref="UniProtKB/TrEMBL:Q5LI68" FT /protein_id="CAH06159.1" FT /translation="MKLSALYKIFLDCAVVTTDSRNCPAGSLFIALKGESFNGNAFAAQ FT ALKDGCAYAIVDEAEYAPENNRHIILVDNCLQTLQQLANYHRRQLGTKVIGITGTNGKT FT TTKELISAVLSKSHNVLYTEGNLNNHIGVPMTLLRLKAEHELAVIEMGANHPGEIKFLV FT HIAEPDYGMITNVGKAHLEGFGSFEGVIRTKGELYDYLREKEDSTVFIHHDNAYLMDIA FT HGLNLIPYGSEDALYVNGHVTGNSPYLTFEWKAGKDGDLHKVQTQLIGEYNFPNALAAV FT TIGRFFGVEAGKIDEALAGYTPRNNRSQLKKTADNTLIIDAYNANPTSMMAALQNFRNM FT TVKKKMLILGDMRELGAESAAEHRKIVDFLQECSFEKVLLVGEQFTATHPPYHTYANAQ FT EVIKELQTEKPKDYTILIKGSNGIKLSTVVEFL" FT misc_feature complement(478537..478815) FT /note="Pfam match to entry PF02875 Mur_ligase_C, Mur ligase FT family, glutamate ligase domain, score 42.1, E-value FT 1.1e-09" FT misc_feature complement(478831..479646) FT /note="Pfam match to entry PF01225 Mur_ligase, Mur ligase FT family, catalytic domain, score 143.3, E-value 3.7e-40" FT CDS complement(479761..480996) FT /transl_table=11 FT /locus_tag="BF9343_0381" FT /old_locus_tag="BF0392" FT /product="putative transporter/antibiotic resistance FT protein" FT /note="Similar to Staphylococcus epidermidis quinolone FT resistance protein se0466 SWALL:Q8CQ24 (EMBL:AE016745) (387 FT aa) fasta scores: E(): 1.3e-09, 23.39% id in 359 aa, and to FT Bacteroides thetaiotaomicron putative sugar transporter FT BT2568 SWALL:AAO77675 (EMBL:AE016936) (410 aa) fasta FT scores: E(): 2e-110, 69.34% id in 411 aa, and to FT Streptococcus mutans conserved hypothetical protein SMU.145 FT SWALL:Q8DWC0 (EMBL:AE014866) (394 aa) fasta scores: E(): FT 2.5e-13, 24.61% id in 386 aa" FT /db_xref="GOA:Q5LI67" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:Q5LI67" FT /protein_id="CAH06160.1" FT /translation="MRIQTGHGTIPLITLIGIWSISALNALPGLAVSPILGKLSAIFPH FT STELDIQMLSSLPSLLIIPFILLAGKLTERVNFIRLLQAGLAIFALSGVLYLLSGQMWQ FT LIAVSALLGVGSGLIVPLSTGLISKYFVGSYRVKQFGLSSAITNITLVVATAVTGYLAE FT VNWHLPFVVYLLPIISLVLSVYLQRSMASEGSTSLTNDKAPADKEEDVDTGNSKYGIHV FT RHLAGIMGVYGLATFLVLVVSFNLPFLMEEYHFTSGNSGIMISLFFLAIMTPGFFLNRI FT VGTLKEKTKFYSFLSIGIGLALIWISPKEWVIAPGCILVGLGYGVIQPVVYNQTTHTAI FT SRKVTLALAFVMAMNYLAILLCPFIIDFFQSTVFHIKSQQFAFVFNLCISIVMLVISYT FT KRNSFLFNDNLK" FT misc_feature complement(order(479803..479856,479899..479967, FT 480004..480063,480073..480126,480145..480213, FT 480256..480324,480439..480498,480511..480579, FT 480616..480684,480697..480765,480784..480852, FT 480895..480963)) FT /note="12 probable transmembrane helices predicted for FT BF0392 by TMHMM2.0 at aa 12-34, 49-71, 78-100, 105-127, FT 140-162, 167-186, 225-247, 262-284, 291-308, 312-331, FT 344-366 and 381-398" FT CDS 481258..482700 FT /transl_table=11 FT /gene="gadB" FT /locus_tag="BF9343_0382" FT /old_locus_tag="BF0393" FT /product="putative glutamate decarboxylase" FT /EC_number="4.1.1.15" FT /note="Similar to Listeria monocytogenes glutamate FT decarboxylase beta GadD or LMO2363 SWALL:DCEB_LISMO FT (SWALL:Q9EYW9) (464 aa) fasta scores: E(): 2.1e-79, 46.52% FT id in 432 aa, and to Bacteroides thetaiotaomicron glutamate FT decarboxylase BT2570 SWALL:AAO77677 (EMBL:AE016936) (481 FT aa) fasta scores: E(): 1.1e-188, 94.72% id in 474 aa, and FT to Synechocystis sp. glutamate decarboxylase Gad or sll1641 FT SWALL:P73043 (EMBL:D90903) (467 aa) fasta scores: E(): FT 3e-86, 49.63% id in 415 aa" FT /db_xref="GOA:Q5LI66" FT /db_xref="InterPro:IPR002129" FT /db_xref="InterPro:IPR010107" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q5LI66" FT /protein_id="CAH06161.1" FT /translation="MEDLNFRKGDAKTEAFGSNRMLQPSPVEKIPDGPTTPEIAYQMVK FT DETFAQTQPRLNLATFVTTYMDDYATKLMNEAININYIDETEYPRIAVMNGKCINIVAN FT LWNSPEKDTWKTGALAIGSSEACMLGGVAAWLRWRKKRQAQGKPFDKPNFVISTGFQVV FT WEKFAQLWQIEMRQVPLTLDKTTLDPEEALKMCDENTICVVPIQGVTWTGLNDDVEALD FT KALDAYNAKTGYDIPIHVDAASGGFILPFLYPDTKWDFRLKWVLSISVSGHKFGLVYPG FT LGWVVWKGKEYLPEEMAFSVNYLGANITQVGLNFSRPAAQILGQYYQFIRLGFQGYKEV FT QYNSLQIAKYIHSQIAKMTPFVNYSEDVVNPLFIWYMKPEYAKNAKWTLYDLQDKLAQH FT GWMVPAYTLPAKLQDYVVMRVVVRQGFSRDMADMLLGDIKNAIAELEKLEYPTSTRIAQ FT EKNLPVEAKVFNHTGKPQAAKK" FT misc_feature 481357..482391 FT /note="Pfam match to entry PF00282 pyridoxal_deC, FT Pyridoxal-dependent decarboxylase conserved domain, score FT 224.2, E-value 1.7e-64" FT CDS 482716..483681 FT /transl_table=11 FT /gene="glsA" FT /locus_tag="BF9343_0383" FT /old_locus_tag="BF0394" FT /product="putative glutaminase" FT /EC_number="3.5.1.2" FT /note="Similar to Rhizobium etli thermolabile glutaminase FT GlsA SWALL:GLSA_RHIET (SWALL:O87405) (309 aa) fasta scores: FT E(): 2.1e-27, 31.71% id in 309 aa, and to Bacteroides FT thetaiotaomicron putative glutaminase BT2571 SWALL:AAO77678 FT (EMBL:AE016936) (321 aa) fasta scores: E(): 4.6e-105, FT 84.11% id in 321 aa, and to Shigella flexneri putative FT glutaminase YbaS or SF0430 SWALL:AAN42085 (EMBL:AE015075) FT (310 aa) fasta scores: E(): 1.5e-49, 44.51% id in 310 aa" FT /db_xref="GOA:Q5LI65" FT /db_xref="HSSP:1U60" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR015868" FT /db_xref="UniProtKB/Swiss-Prot:Q5LI65" FT /protein_id="CAH06162.1" FT /translation="MDKKISISQIKEVVQQAYEQVKGNTGGKNADYIPYLANIDKNLFG FT ISVCLLNGQTITVGDFDYRFGIESVSKVHTAILILRQYGAQKVLEMIGADATGLPFNSI FT IAILLENDHPSTPLVNAGAISACSMVTPIGNSDKKWDAIVQNITDLCGSAPQLIEELYK FT SETATNFNNRSIAWLLKNYNRIYDDPNMSLDLYTRQCSLGVTAQMLSVAAGTVANGGVN FT PVTKKQVFDAELTPKITSMIATVGFYEHSGDWMYTSGIPAKTGVGGGVMGVLPGVFGVS FT AFAPPLDGSGNSVKAQLAIKYIMNKLGLNVFNGARVTIVD" FT misc_feature 482794..483651 FT /note="Pfam match to entry PF04960 Glutaminase, FT Glutaminase, score 344.8, E-value 8.3e-101" FT CDS complement(483767..485782) FT /transl_table=11 FT /locus_tag="BF9343_0384" FT /old_locus_tag="BF0395" FT /product="putative two-component system sensor histidine FT kinase" FT /note="Similar to Bacteroides thetaiotaomicron FT two-component system sensor histidine kinase BT3645 FT SWALL:AAO78750 (EMBL:AE016941) (671 aa) fasta scores: E(): FT 2e-99, 43.24% id in 666 aa, and to Bacteroides FT thetaiotaomicron two-component sensor histidine kinase FT BT0654 SWALL:AAO75761 (EMBL:AE016928) (660 aa) fasta FT scores: E(): 6.8e-36, 39.93% id in 308 aa, and to FT Bacteroides thetaiotaomicron two-component system sensor FT histidine kinase BT1802 SWALL:AAO76909 (EMBL:AE016933) (685 FT aa) fasta scores: E(): 1.9e-31, 27.23% id in 639 aa" FT /db_xref="GOA:Q5LI64" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:Q5LI64" FT /protein_id="CAH06163.1" FT /translation="MSSKPYRHFIALLLVLFCSRFEAQAEDLFAKTDSTLQQYLIRCKA FT QIKDPDFLQTNDTLTRMAQEKNDKRMQVIAVALKLDYYYYQNNPDSILVMVDRVKKISR FT RNNELKYFYFAWGSRLIIYYIKQHQTNTAIYEARKMLQSAEADNFIPGIVQCYRTLGTV FT YMTQSNPKLAYENFRKQIALIEENEIEDINLPTQYASLAQCALEMHRPDEALKALEKGS FT KCTRSSYQIFTVQKAYILYYLETKEYEKARKTLVELEQLFEKDKSLTLYKSGLFYIQIE FT YYRNTGQYRKALDVIEEIKNDSSSINKYLDYTLTQKQGDIYWEMNQKARAAQYYRDYIL FT ATDSIRSQEIQNSTNEFYTIMEVEQLHKEKNELLLHMQEEKLQKINIALVSLVIILVAG FT TMLLFHISKLNKKLKRSEAKVIQQNKELVENGEELRKAKEQAENASRMKTTFIQSMSHE FT IRTPLNSIVGFSQVLSNYFKEEDNDEIREFASIIEISSSNLLRLINDVLDISYLDQSEI FT LPYDKPEDINNCCLLSIERTRNSIKKEVSLRFEPSCGPLMILTNPERVAQILTHLLHNA FT IKFTDKGNITLAYTISPTEKQIVYTVTDTGKGIPVEQQEYVFERFAKLNDFSQGTGLGL FT PICRIIAEKLGGSLIIDKTYTKGCRFILTLPLIKAD" FT misc_feature complement(483779..484105) FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 109.7, FT E-value 4.7e-30" FT misc_feature complement(484238..484444) FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 76.4, E-value 5.1e-20" FT misc_feature complement(484562..484630) FT /note="1 probable transmembrane helix predicted for BF0395 FT by TMHMM2.0 at aa 385-407" FT misc_feature complement(485708..485782) FT /note="Signal peptide predicted for BF0395 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.939 between residues 25 and 26" FT CDS 485894..486754 FT /transl_table=11 FT /gene="folP" FT /gene_synonym="dhpS" FT /locus_tag="BF9343_0385" FT /old_locus_tag="BF0396" FT /product="putative dihydropteroate synthase" FT /EC_number="2.5.1.15" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT and Shigella flexneri dihydropteroate synthase FolP or DhpS FT or B3177 or C3933 or SF3217 SWALL:DHPS_ECOLI (SWALL:P26282) FT (282 aa) fasta scores: E(): 1e-37, 44.11% id in 272 aa, and FT to Bacteroides thetaiotaomicron dihydropteroate synthase FT BT3646 SWALL:AAO78751 (EMBL:AE016941) (287 aa) fasta FT scores: E(): 5.8e-89, 83.27% id in 275 aa, and to Vibrio FT cholerae dihydropteroate synthase vc0638 SWALL:Q9KU85 FT (EMBL:AE004149) (278 aa) fasta scores: E(): 1.2e-38, 41.69% FT id in 271 aa" FT /db_xref="GOA:Q5LI63" FT /db_xref="InterPro:IPR000489" FT /db_xref="InterPro:IPR006390" FT /db_xref="InterPro:IPR011005" FT /db_xref="UniProtKB/TrEMBL:Q5LI63" FT /protein_id="CAH06164.1" FT /translation="MDSTIFKSLNVNGRLLDLSIPQVMGILNVTPDSFYAGSRSRTEAD FT IAARARQILDEGASMIDIGAYSSRPNAEHISPEEEMRRLRTGLEILNRNHPGAIISVDT FT FRAGVAEECVKEYGVAIINDISAGEMDEQMFPTVARLNVPYIMMHMQGTPQNMQKEPHY FT ENLLKEVFIYFARKVQQLRDLGVKDIILDPGFGFGKTLEHNYELMAHLEEFGIFELPLL FT VGVSRKSMIYRLFGTTPQEALNGTTVLDTVALMKGADILRVHDVREAVESVRLIEKLKS FT VSACS" FT misc_feature 485969..486697 FT /note="Pfam match to entry PF00809 Pterin_bind, Pterin FT binding enzyme, score 334.2, E-value 1.3e-97" FT CDS 486789..487553 FT /transl_table=11 FT /locus_tag="BF9343_0386" FT /old_locus_tag="BF0397" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3647 SWALL:Q8A1L4 (EMBL:AE016941) FT (228 aa) fasta scores: E(): 3.4e-70, 84.64% id in 228 aa, FT and to Clostridium perfringens hypothetical protein CPE2351 FT CPE2351 SWALL:Q8XHX5 (EMBL:AP003194) (285 aa) fasta scores: FT E(): 7e-33, 43.19% id in 257 aa, and to Staphylococcus FT aureus conserved hypothetoical protein sav2163 or sa1967 or FT mw2090 SWALL:Q9RL70 (EMBL:Y09927) (269 aa) fasta scores: FT E(): 5.5e-30, 43.9% id in 246 aa. Possible alternative FT start site at codon 27" FT /db_xref="GOA:Q5LI62" FT /db_xref="InterPro:IPR003390" FT /db_xref="InterPro:IPR014046" FT /db_xref="UniProtKB/TrEMBL:Q5LI62" FT /protein_id="CAH06165.1" FT /translation="MFFEFGIKDFIDILLVAFLLYYTYKLMKASGSINVFTGILVFILI FT WLVVSQVLEMKLLGSIFDKLVSVGVLALIVLFQDEIRRFLLTLGSHQHASALVRFLTGN FT KKEKLQHDDIMPIVMACISMGKQKVGALIVMERNVPLDDVIRTGEIIDANINQRLIENI FT FFKNSPLHDGAMVISKKRIKAAGCILPVSHNLDIPKELGLRHRAAMGISQVSDALAIIV FT SEETGAISVAWRGQFYLRQSAEELESLLTKES" FT misc_feature order(486816..486860,486879..486947) FT /note="2 probable transmembrane helices predicted for FT BF0397 by TMHMM2.0 at aa 10-24 and 31-53" FT misc_feature 487137..487502 FT /note="Pfam match to entry PF02457 DUF147, Domain of FT unknown function DUF147, score 190.1, E-value 3e-54" FT repeat_region complement(487578..488064) FT /note="hit to rep1 27..513 score: 2228 percent id: 95.28" FT CDS 488177..488437 FT /transl_table=11 FT /locus_tag="BF9343_0387" FT /old_locus_tag="BF0400" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LI61" FT /protein_id="CAH06166.1" FT /translation="MVIILFIKVCDMGEIKLISSLFVQGKRSLGNCVKSNESIVYLHVA FT QLDNVRLLLIRFIDETGGRKIIFYLQSTLFLIFFAKENDEQ" FT CDS 488434..489504 FT /transl_table=11 FT /locus_tag="BF9343_0388" FT /old_locus_tag="BF0401" FT /product="putative transmembrane protein" FT /note="no significant database matches" FT /db_xref="GOA:Q5LI60" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:Q5LI60" FT /protein_id="CAH06167.1" FT /translation="MKFIYSILFALLWIGVTITFGSYLYRMGLPIVNASAQKLLLRTID FT EDLECRFRKLKPNQAYVTGKKHTKNKKVTLTDKSGTHNVRQFAIDTVYTDTSFVHRVKQ FT SYLIERNSINVDSLNQKWQLKLRMDGICANTGIKLTNSLKNGERISASSGLNEPDCFLL FT AYSTGVGYGIKMDAFIRPFWATVVLKAHWNNIWTWNYVLFSLIFCLFYVPGVRLFLVQV FT LSKFRIVDNHVKSSQPLAQQKGEFVWEVDGLTFDYLQRSITYHDQTCILRKQVAEVLLA FT FLKAPGHLLLNEDLKKLFWKELDNVDSFMERRNRLITDLRTDLRKIGANLSVTLVNGGY FT QLHFSLENSKKSVKNQ" FT misc_feature order(488443..488511,489025..489093) FT /note="2 probable transmembrane helices predicted for FT BF0401 by TMHMM2.0 at aa 4-26 and 198-220" FT CDS 489570..489797 FT /transl_table=11 FT /locus_tag="BF9343_0389" FT /old_locus_tag="BF0402" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LI59" FT /protein_id="CAH06168.1" FT /translation="MKNAKITIGLIGLLLIGLVSVRKEGKVQEAGLLLQNVEALATGEP FT FPDGDIACIGDGSVDCPFTYLKVEVVYREE" FT CDS 489797..490684 FT /transl_table=11 FT /locus_tag="BF9343_0390" FT /old_locus_tag="BF0403" FT /product="conserved hypothetical protein" FT /note="Similar to C-terminus of Bacteroides FT thetaiotaomicron hypothetical protein BT1085 SWALL:AAO76192 FT (EMBL:AE016930) (131 aa) fasta scores: E(): 1.1e-09, 35.48% FT id in 124 aa, and the N-terminus is similar to the FT C-terminus of Bacteroides thetaiotaomicron hypothetical FT protein BT4048 SWALL:AAO79153 (EMBL:AE016943) (373 aa) FT fasta scores: E(): 6.7e-08, 26.92% id in 130 aa" FT /db_xref="InterPro:IPR008962" FT /db_xref="InterPro:IPR011467" FT /db_xref="InterPro:IPR012336" FT /db_xref="UniProtKB/TrEMBL:Q5LI58" FT /protein_id="CAH06169.1" FT /translation="MGRPIKIIGYLCFLMALCSCKETKEQQISRLIHEWEGRTIVYPAD FT MTFSVLGKDSAGYSFPQNEYTIMTYVDSVGCTSCKLQLPTWKYFISMVDTMANGKVSFL FT FAFHPKNKKEISFLLKRDRFLYPVFIDEKGGFDALNHFPSDVNFQTFLLDSQNKVIAIG FT NPVHNKKVRDLYLQIITGRQTGVATSSQTKVVLDKNLDEMGDFDWKTPQTATFSLRNLG FT DHLLIIEDINASCGCTSVAYSKEPVSPRKSADIQVTYRAEHPEHFEKTITVYCNTPTSP FT IRLKIRGNAIDEEY" FT CDS 490815..491081 FT /transl_table=11 FT /locus_tag="BF9343_0391" FT /old_locus_tag="BF0404" FT /product="hypothetical exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LI57" FT /protein_id="CAH06170.1" FT /translation="MKKKVKAMIAFIAVIAVSFIGYNVYKVQSTELLSDIAMANVEALA FT NTGEGGSSTTYCCGNYGDCMKVMLPNGTTTVIKGIRLNSPCIN" FT misc_feature 490815..490877 FT /note="Signal peptide predicted for BF0404 by SignalP 2.0 FT HMM (Signal peptide probability 0.971) with cleavage site FT probability 0.445 between residues 21 and 22" FT CDS 491253..492329 FT /transl_table=11 FT /locus_tag="BF9343_0392" FT /old_locus_tag="BF0405" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0659 SWALL:AAO75766 (EMBL:AE016928) (345 aa) FT fasta scores: E(): 2.4e-10, 21.73% id in 345 aa" FT /db_xref="InterPro:IPR011042" FT /db_xref="InterPro:IPR011044" FT /db_xref="UniProtKB/TrEMBL:Q5LI56" FT /protein_id="CAH06171.1" FT /translation="MIKRPYLSFTLLLLLSMCILEGCEKEKSHTVLELFSESQSLSPKK FT DFYVNEDSIAIIEGLSCDGKNLIVNDYHSGCCYTLFDKKSGEYIARFGTIGQGPAELPS FT PCYGYLTESDFTVFDDQTRIVMKYSLDSLRNSRKKDGSPVRLAQYKIPEAQISKLIAID FT DTTFLCAGTYKSRYQYLLFNKNDSVLDYGVDVYNAADSAFQTYTRYLSNQGNLVMNPEK FT HTFAGSINFSSNIDFFEIVNNKIELIKSLRLGDPINKPVNEEGIYYVDLTENTQTGYID FT LSATSKYVYALYSDKKMYENNRKSDTVLVFDWDGNPIKKYSLDTDAYYIAVDSTQQSLF FT AAVKNSSSGWKIICYALD" FT misc_feature 491253..491318 FT /note="Signal peptide predicted for BF0405 by SignalP 2.0 FT HMM (Signal peptide probability 0.932) with cleavage site FT probability 0.896 between residues 22 and 23" FT CDS 492490..493629 FT /transl_table=11 FT /locus_tag="BF9343_0393" FT /old_locus_tag="BF0406" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0664 SWALL:Q8AA01 (EMBL:AE016928) (382 aa) fasta FT scores: E(): 2e-08, 24.18% id in 244 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT0661 SWALL:Q8AA04 FT (EMBL:AE016928) (408 aa) fasta scores: E(): 1.2e-05, 29.53% FT id in 149 aa" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LI55" FT /protein_id="CAH06172.1" FT /translation="MVMAVFTGYNFYIMKNFSLIVVGILFIYCVSSCRKQVDKGFEMTV FT DLSISNPYLPMSVLVDTIESVRLQLPSPYFWGMVDNVISKDSCYYISDRKQEMAFRFSK FT NGTFLNAIGQRGEGPGEYREMDSFFVGKDCVYVCDMSKRTIYSYSFDGKFLHSLSFPYS FT LVFNDVVELPDGRFLCHRPSQSENCKGLWILDQKGRRVKNLLEYEKGTPCKNSYWNTLC FT AQEDGTIKIYNPVDGSYYQYDAVNDTVVRTMRQKSNLPMLADFHCSDRELYETKEECTY FT SLFTVDGKNLVFSLWSFNSPNKGMWSVYFKKDGRIEQGNLTKMDIPGYSEMGRPVSSNI FT PNTFVTVYTDEFPDDAFPSAYQQQEINEQTAILSLLRLK" FT misc_feature 492490..492549 FT /note="1 probable transmembrane helix predicted for BF0406 FT by TMHMM2.0 at aa 21-43" FT CDS join(493878..493988,493990..494154) FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0394" FT /old_locus_tag="BF0408" FT /product="putative hypothetical protein (pseudogene)" FT /note="Pseudogene. Similar to C-terminus of Bacteroides FT thetaiotaomicron hypothetical protein BT1085 SWALL:Q8A8T2 FT (EMBL:AE016930) (131 aa) fasta scores: E(): 4.9e-09, 38.29% FT id in 94 aa, and to a fragment of Bacteroides FT thetaiotaomicron hypothetical protein BT4048 SWALL:Q8A0H3 FT (EMBL:AE016943) (373 aa) fasta scores: E(): 2.7e-08, 31.11% FT id in 90 aa. Note: This CDS has a frameshift after residue FT 37" FT CDS 494291..494599 FT /transl_table=11 FT /locus_tag="BF9343_0395" FT /old_locus_tag="BF0409" FT /product="hypothetical exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LI54" FT /protein_id="CAH06174.1" FT /translation="MKTRMKITIAFVAVMVLSFTGYNVYKTQKAIQLSDVAMANVEALA FT DGEGTNAGYCYLEDTWSTKRGYKYFCDSKTDKNTIYPCPSSMESGWYDDNKQDRCTK" FT misc_feature 494291..494359 FT /note="Signal peptide predicted for BF0409 by SignalP 2.0 FT HMM (Signal peptide probability 0.959) with cleavage site FT probability 0.407 between residues 23 and 24" FT CDS 494781..495902 FT /transl_table=11 FT /locus_tag="BF9343_0396" FT /old_locus_tag="BF0411" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="InterPro:IPR011044" FT /db_xref="InterPro:IPR015943" FT /db_xref="UniProtKB/TrEMBL:Q5LI53" FT /protein_id="CAH06175.1" FT /translation="MHIIKVIFSLALILNICVSCHENDDTAYFNGKIQTIEDSIKDTKK FT ATLKILPLDGANFGWLSTYDSLMFFMNPKLPDRFYNIFNIDTGKEIGTFCYRGSGPGEV FT AALGPIFHFFKEKGDLKTLLFAPNEEKLFIWNITQSIKRDTTVMDKQISYPWREENGGA FT PYYLMFLKDENTLITELQSFPLNDKEATLPAYQKRTLDTNKLLKSFSSYKKSIRNDEAS FT ILPESFFYSNDAIKPDGTKVVQAMVHLAQLNILDLETGHVSGYRLEGEPDFSVFKSDEK FT IKSYFTRVQADDNYIYAVYWGKERWERFETPHMNIIHVYDWDGNLVQKIETDYSIGQMW FT IDPIRNRLYVTNPQIDDVLYLDLDDFLVPNTGL" FT misc_feature 494781..494846 FT /note="Signal peptide predicted for BF0411 by SignalP 2.0 FT HMM (Signal peptide probability 0.732) with cleavage site FT probability 0.731 between residues 22 and 23" FT misc_feature 494829..494846 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT CDS 496011..497924 FT /transl_table=11 FT /locus_tag="BF9343_0397" FT /old_locus_tag="BF0412" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0668 SWALL:AAO75775 (EMBL:AE016928) (649 aa) FT fasta scores: E(): 1.1e-152, 57.05% id in 645 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT3420 FT SWALL:AAO78526 (EMBL:AE016940) (508 aa) fasta scores: E(): FT 3.9e-24, 25.62% id in 523 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT3542 SWALL:AAO78648 FT (EMBL:AE016941) (400 aa) fasta scores: E(): 7.9e-17, 27.75% FT id in 400 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LI52" FT /protein_id="CAH06176.1" FT /translation="MKYVLFILLVLTLAACQSEKDRRLEYALEFAGDNRVELEKVLEHY FT RTDPEKLEAARFLIRNMPGWYSYEGNELDSIHHLLVGVCEGRSISKREKNKWNRISFDS FT LSKIYDAQVITAEYLIDNIDLAFEVWRKYPWNRNLPFDDFCELILPYRIADEPLSDWRK FT LYYEDYGTLLDSLYKGDDVIEASKIIDGKLRKLYYIYNTDFRVPHLNAVFLYHNRIGYC FT REACDLTIYAMRACGIPVATDYFVYSPDYQHYHCWTMLRDTTGTFLQFGFNEFEASRDT FT LRHDGRKKGKVYRYCFGMQADKNSGTSGNRQLSPVLKNRFVKDVTSEYFGSNDTTIPIQ FT MSGEQYIYLGIFSPGGWIPIDMALGSAGKVTFRDIEPDVIYQTLYQGDGGKLYPAGYPF FT ISKTGGGFVLLKPNIDLMEEAILKRKMPQQKTIAEWAYRAIIGAKVEAADDLAFMQADL FT LWQFEDTLTTNYCVLTPLLRKKYRYVRYVAPIGKRMELAELALFKDSLCKEKVRLGRIN FT SIEPIAKLEYVTDGNILTYFQARDTSCYLAYDLGESTLIERIVFSPRNDDNYIWPGDNY FT ELFYQDGINGWKSLGSKVATEREIDFLVPQNALLWLRNRTKGREEQVFIYKNGRQYFAF FT DL" FT CDS 498026..498319 FT /transl_table=11 FT /locus_tag="BF9343_0398" FT /old_locus_tag="BF0413" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LI51" FT /protein_id="CAH06177.1" FT /translation="MLDFVYKGNAYSLFYSKTNDEVPVVDIKGCQLENKNSFGFWGAIG FT VEGEALVNAVEASWVKAEVGRLNPVVVEKLGLNKWNSIQESDNPVLAFYRFK" FT CDS 498507..499709 FT /transl_table=11 FT /locus_tag="BF9343_0399" FT /old_locus_tag="BF0414" FT /product="conserved hypothetical exported protein" FT /note="Limited similarity to Bacteroides thetaiotaomicron FT hypothetical protein BT0661 SWALL:AAO75768 (EMBL:AE016928) FT (408 aa) fasta scores: E(): 0.094, 21.46% id in 410 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LI50" FT /protein_id="CAH06178.1" FT /translation="MNNFTKEVMDKVSIVLLLVLICGCSSMNQKMNDGIERIPIDVHNV FT SRDASLFIDKIELVPLETNDSSLLHKYRKVMYDKETDVYAVYTREQVIFTFSGNGAFIS FT NSKKMQGQGPDEYHMAIDVKFNPYLQGLDLLNPYGTIYTYSLDFKLLAKRKIKPEFPID FT HLIAFNTEEYIFTYPSLWTDQEVAFANLRTQQIYNANYNGTISSGNSMDKECFYKIGDN FT FYFIPPGINYYFYRIDTKEMKFTPMIYLDFGDSEIKEEGLPGRAAGKRTDLDEERLRVV FT KEMQDRSQFLKHSNNHFVPLIKFFNEDYVYVYFVKSTQGFGSNFIYNRKTKESFLTNEG FT KPFIMNCCFAIVDNILLSIHQPEYVSRLVDQRFMSSEEIRKMEQIKEDDNPVIIKYYLK FT R" FT misc_feature 498507..498590 FT /note="Signal peptide predicted for BF0414 by SignalP 2.0 FT HMM (Signal peptide probability 0.768) with cleavage site FT probability 0.412 between residues 28 and 29" FT misc_feature 498546..498578 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(499757..500776) FT /transl_table=11 FT /locus_tag="BF9343_0400" FT /old_locus_tag="BF0415" FT /product="possible acetyltransferase" FT /note="Similar to Bacteroides thetaiotaomicron putative FT acetyltransferase BT3688 SWALL:AAO78793 (EMBL:AE016941) FT (339 aa) fasta scores: E(): 6.4e-78, 55.42% id in 341 aa, FT and to Fusobacterium nucleatum acetyltransferase FN1041 FT SWALL:Q8R651 (EMBL:AE010611) (391 aa) fasta scores: E(): FT 1.8e-09, 24.36% id in 316 aa, and to Bacillus halodurans FT hypothetical protein BH1812 SWALL:Q9KBW2 (EMBL:AP001513) FT (386 aa) fasta scores: E(): 2.9e-05, 24.92% id in 317 aa" FT /db_xref="GOA:Q5LI49" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q5LI49" FT /protein_id="CAH06179.1" FT /translation="MIKEQVKSLWKLCFDDSEAFIELYFRLRYNNEVNLAIQSGEEVIA FT ALQMLPYPMTFCNKIVPTSYISGACTHPDYRAKGVMRELLSQSFARMLRNGVLFSTLIP FT AEPWLFGYYAKTGYTPAFRISHKVFSLSELTIGPEPDTMIEETTEYQEDYYQYLTGKLS FT ERACCLQHTPTDFKVVLADLALTQNTVLIARKDNRVTGIAVVYKHDDSSYINELFADNE FT AVRAQLLYRAGLRNGTERIILQLPPVESLPSVPLGMARIIDARAVLQLYAAGCPEVEMN FT IELTDEQLSVNNGYYYLCKGKCMTSEVRLPGVHTRMTIAELSEKILGEMQPYMSLMMN" FT CDS complement(500786..501703) FT /transl_table=11 FT /locus_tag="BF9343_0401" FT /old_locus_tag="BF0416" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3689 SWALL:AAO78794 (EMBL:AE016941) FT (305 aa) fasta scores: E(): 4.8e-106, 81.63% id in 305 aa, FT and to Clostridium tetani conserved protein CTC00813 FT SWALL:AAO35411 (EMBL:AE015938) (303 aa) fasta scores: E(): FT 2.8e-33, 35.43% id in 302 aa, and to Helicobacter pylori FT J99 putative jhp0277 SWALL:Q9ZME3 (EMBL:AE001465) (290 aa) FT fasta scores: E(): 3.8e-30, 34.7% id in 291 aa" FT /db_xref="InterPro:IPR016181" FT /db_xref="InterPro:IPR016732" FT /db_xref="InterPro:IPR024320" FT /db_xref="UniProtKB/TrEMBL:Q5LI48" FT /protein_id="CAH06180.1" FT /translation="MIAFRDITIQDKDTITAYTMNSCRRNCDLSFSNLCSWRFLYHTKF FT AIINNFLVFKFWAGDELAYMMPVGEGNLEEVLNELIEDARQEGEPFCMLGVCSCMREDL FT EAIMPGQFGFTVDRDYADYIYLRSDLATLKGKKFQSKRNHINKFRNTYPDYEYSPITKD FT RIQECLELEAKWCKANDCDQQEGTGNERRALIYALNHFEELGLTGGILHVNGQIVAFTF FT GMPINKETFGVHVEKADTSIDGAYAMINYEFANHIPEQYIYINREEDLGIEGLRKAKLS FT YHPETILEKYMACLKEQPVEMIKW" FT CDS complement(501759..502454) FT /transl_table=11 FT /locus_tag="BF9343_0402" FT /old_locus_tag="BF0417" FT /product="putative LrgB family transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT membrane protein BT3690 SWALL:AAO78795 (EMBL:AE016941) (231 FT aa) fasta scores: E(): 3.9e-73, 90.47% id in 231 aa, and to FT Neisseria meningitidis hypothetical inner membrane protein FT NMA0436 SWALL:Q9JWD1 (EMBL:AL162753) (230 aa) fasta scores: FT E(): 4.4e-34, 44.78% id in 230 aa, and to Neisseria FT meningitidis hypothetical protein NMB2004 NMB2004 FT SWALL:Q9JXJ9 (EMBL:AE002550) (230 aa) fasta scores: E(): FT 5.1e-34, 44.78% id in 230 aa" FT /db_xref="GOA:Q5LI47" FT /db_xref="InterPro:IPR007300" FT /db_xref="UniProtKB/TrEMBL:Q5LI47" FT /protein_id="CAH06181.1" FT /translation="MNYLENEFFLLAITFGIYFFAKLLQKKTGILLLNPILLTIAVIII FT FLKLTNISFETYNQGGHLIEFWLKPAVVALGVPLYLQLETIKKQLLPIILSQLAGCIVG FT VISVVLIAKLMGASQEVILSLAPKSVTTPIAMEVTKTLGGIPSLTAAVVVCVGLLGAVL FT GFKTMKIMHVGSPIAQGLSMGTAAHAVGTSTAMDISSKYGAYASLGLTLNGIFTALLTP FT TILRLLGIL" FT misc_feature complement(501768..502454) FT /note="Pfam match to entry PF04172 LrgB, LrgB-like family, FT score 330.7, E-value 1.5e-96" FT misc_feature complement(order(501780..501848,501960..502028, FT 502119..502187,502206..502274,502317..502373, FT 502392..502445)) FT /note="6 probable transmembrane helices predicted for FT BF0417 by TMHMM2.0 at aa 4-21, 28-46, 61-83, 90-112, FT 143-165 and 203-225" FT CDS complement(502451..502789) FT /transl_table=11 FT /locus_tag="BF9343_0403" FT /old_locus_tag="BF0418" FT /product="putative transmembrane holin-like protein LrgA" FT /note="Similar to Staphylococcus aureus holin-like protein FT LrgA or sav0262 or sa0252 SWALL:Q99WW2 (EMBL:AP003358) (145 FT aa) fasta scores: E(): 1.1e-06, 30.55% id in 108 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical FT protein, putative membrane protein BT3691 SWALL:AAO78796 FT (EMBL:AE016941) (147 aa) fasta scores: E(): 3.7e-40, 89.28% FT id in 112 aa, and to Neisseria meningitidis hypothetical FT inner membrane protein NMA0437 SWALL:Q9JWD0 (EMBL:AL162753) FT (114 aa) fasta scores: E(): 1e-17, 46.84% id in 111 aa" FT /db_xref="GOA:Q5LI46" FT /db_xref="InterPro:IPR005538" FT /db_xref="UniProtKB/TrEMBL:Q5LI46" FT /protein_id="CAH06182.1" FT /translation="MIRQCAILFGCLALGELIVYLTGIKLPSSIIGMLLLTLFLKLGWI FT KLHWVQGMSDFLVANLGFFFIPPGVALMLYFDIIAAQFWPIVIATLVSTLLVLVITGWV FT HQLTRKLK" FT misc_feature complement(502460..502789) FT /note="Pfam match to entry PF03788 LrgA, LrgA family, score FT 165.2, E-value 9.4e-47" FT misc_feature complement(order(502475..502543,502553..502621, FT 502640..502708,502718..502777)) FT /note="4 probable transmembrane helices predicted for FT BF0418 by TMHMM2.0 at aa 5-24, 28-50, 57-79 and 83-105" FT CDS 502998..503681 FT /transl_table=11 FT /locus_tag="BF9343_0404" FT /old_locus_tag="BF0420" FT /product="hypothetical exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LI45" FT /protein_id="CAH06183.1" FT /translation="MKKSLLISVFATLAMMISLNALAQEKATGKAYKAIQKDEKVINKD FT LQKKAIKEARKQAKELTKEGFKTPVGKLPLDKQLENSWEKQMEIDMNGNPYWYIATSRV FT IGGNQSAAAMQATNTAKIDIAGQVQTKVTQLIESKVANDDMGQEEAASLSSAVAAGKSI FT ISGTLGRTIPLVEVYRTLPNKNVEVMVTIGYSLEAANKVAVKALSEELAKKSPELAKEL FT DKLAQ" FT misc_feature 502998..503066 FT /note="Signal peptide predicted for BF0420 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.999 between residues 23 and 24" FT misc_feature 503007..503066 FT /note="1 probable transmembrane helix predicted for BF0420 FT by TMHMM2.0 at aa 4-23" FT CDS 503707..504504 FT /transl_table=11 FT /locus_tag="BF9343_0405" FT /old_locus_tag="BF0421" FT /product="hypothetical exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LI44" FT /protein_id="CAH06184.1" FT /translation="MNVNRLLGILAILLLTAANALYAQKPVKVKGVQGRWQVSDDITLK FT QAEERAFMEAKKAALQKAGVMENVWSVFGQITQEDGQELHEAYSQMNVLAIGGMVNVTN FT KKVEEVWDTDTRSLYKVVTIDAEVRKEDKSDSSYALEVKGVETLYREGDVFHCKLTIHG FT TDSYLKFFWFDSNGGALLYPNSYEPNTLLKAGKEYAIPFSNAVDYRMEKQHGKESEKIN FT MMMVATKEDIPFTKEVTYQNVLEWVYSIPAVQRCAFYDMVLIK" FT misc_feature 503707..503775 FT /note="Signal peptide predicted for BF0421 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.938 between residues 23 and 24" FT CDS 504546..506102 FT /transl_table=11 FT /locus_tag="BF9343_0406" FT /old_locus_tag="BF0422" FT /product="hypothetical exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LI43" FT /protein_id="CAH06185.1" FT /translation="MMKTKHYFSFVFASLFLIPSVITAQDVNYQKEFDTFQEKQQKEYK FT EFKNKADEEFATFLKEAWQKYNASMEDSMPTRPEPVKPTLFDKKKPVPAPVEIKPAVPK FT IPIADKPGVGGEVNVEVKKQDLPVVADKPAPGVYVPGKPYTPVKVDIPAPLPGSSAHRN FT AIEFYGTRFEVATDVIDGFELGGTSESKVAGAWSRLCKADHEQLINDCIRLKKEHQMND FT WAFLMFIKQLGVQVCGVAKKDDVAFLQMFILNKCGYKVRLSKINDKLKLLVAPAGTIFG FT IPYITFKGVKYYVFEADKDGSMAVYTYSQDFANAKNLVCMDLSAVPQFGMQEFSKTVSP FT SEKSLLKVNTAVNKNLMDFYKDYPQCEVAVYYKTPMSKELKSALYPPLQAAIKGKSEKD FT AANILIDFVQNSFQYQTDGEQFGYEKPFFMDENFYYPACDCEDRAILFSNLVKDLLGLD FT AVLLDYPNHIASAVRFNEDISGDYILLDGKKYLICDPTYIGAPIGMCMDRFKSVPPEII FT R" FT misc_feature 504546..504617 FT /note="Signal peptide predicted for BF0422 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.971 between residues 24 and 25" FT misc_feature 504564..504632 FT /note="1 probable transmembrane helix predicted for BF0422 FT by TMHMM2.0 at aa 7-29" FT CDS 506236..507255 FT /transl_table=11 FT /gene="ptaA" FT /gene_synonym="pta" FT /locus_tag="BF9343_0407" FT /old_locus_tag="BF0423" FT /product="putative phosphate acetyltransferase" FT /EC_number="2.3.1.8" FT /note="Similar to Clostridium thermosaccharolyticum FT phosphate acetyltransferase Pta or PtaA SWALL:PTA_CLOTS FT (SWALL:Q59330) (328 aa) fasta scores: E(): 3.3e-58, 52.55% FT id in 333 aa, and to Bacteroides thetaiotaomicron phosphate FT acetyltransferase BT3692 SWALL:AAO78797 (EMBL:AE016941) FT (339 aa) fasta scores: E(): 1.5e-107, 88.49% id in 339 aa, FT and to Thermoanaerobacter tengcongensis FT phosphotransacetylase Pta or TTE1482 SWALL:Q8R9V3 FT (EMBL:AE013105) (331 aa) fasta scores: E(): 1.9e-66, 57.65% FT id in 333 aa" FT /db_xref="GOA:Q5LI42" FT /db_xref="InterPro:IPR002505" FT /db_xref="InterPro:IPR004614" FT /db_xref="InterPro:IPR012147" FT /db_xref="UniProtKB/TrEMBL:Q5LI42" FT /protein_id="CAH06186.1" FT /translation="MLNLINSIVARAQANRQRIVLPEGTEERTLKAANQILTDEVADLI FT LLGNPEEINAAAAKWGLGNINRATIIDPENHPKKEEYAQLLCELRKKKGMTIEEARKLV FT LDPLYLGCLIIKSGDADGQLAGARNTTGDVLRPALQIIKTSPGITCVSGAMLLLTHAPE FT CGQNGLLVMGDVAVTPVPDASQLAQIAVCTARTAQAVAGIAEPKVAMLSFSTKGSAKHE FT NVDKVVEALKLAKEMAPDLNIDGEMQADAALVPSVGASKAPGSPVAGEANVLIVPSLEV FT GNISYKLVQRLGHADAVGPILQGIARPVNDLSRGCSIEDVYRMIAITANQAIAAKNGK" FT misc_feature 506242..507222 FT /note="Pfam match to entry PF01515 PTA_PTB, Phosphate FT acetyl/butaryl transferase, score 521.9, E-value 3.9e-154" FT CDS 507274..508470 FT /transl_table=11 FT /gene="ackA" FT /locus_tag="BF9343_0408" FT /old_locus_tag="BF0424" FT /product="putative acetate kinase" FT /EC_number="2.7.2.1" FT /note="Similar to Thermotoga maritima acetate kinase AckA FT or TM0274 SWALL:ACKA_THEMA (SWALL:Q9WYB1) (403 aa) fasta FT scores: E(): 5.1e-89, 59.85% id in 401 aa, and to FT Bacteroides thetaiotaomicron acetate kinase BT3693 FT SWALL:AAO78798 (EMBL:AE016941) (399 aa) fasta scores: E(): FT 5.5e-130, 83.96% id in 399 aa, and to Clostridium FT thermosaccharolyticum acetate kinase AckA SWALL:ACKA_CLOTS FT (SWALL:Q59331) (400 aa) fasta scores: E(): 3.2e-88, 58.29% FT id in 398 aa" FT /db_xref="GOA:Q5LI41" FT /db_xref="HSSP:1G99" FT /db_xref="InterPro:IPR000890" FT /db_xref="InterPro:IPR004372" FT /db_xref="InterPro:IPR023865" FT /db_xref="UniProtKB/Swiss-Prot:Q5LI41" FT /protein_id="CAH06187.1" FT /translation="MKVLVLNCGSSSIKYKLFDMDSKEVIAQGGIEKIGLKDSFLKLTL FT PNGEKKILEKDIPEHTVGVEFILNTLVSPEYGAIQSLEEINAVGHRMVHGGERFSKSVL FT LTKEVLEAFAACNDLAPLHNPANLKGVDAITAILPNVPQIGVFDTAFHQTMPEHAYLYA FT IPYELYKKYGVRRYGFHGTSHRYVSQRVCEYLGIKPEGLKLITCHIGNGGSIAAIKDGK FT CIDTSMGLTPLEGLMMGTRSGDIDAGAVTFIMDKEGLTTTGISNLLNKKSGVAGMMNGS FT SDMRDLEAAVAKGDPQAILTEQMYFYRIKKYIGAYAAALGGVDVILFTGGVGENQATCR FT AGVCEGLEFLGVKLDPEKNKVRGEEAIISTDDSRVKVVVIPTDEELLIASDTMAILDK" FT misc_feature 507277..508443 FT /note="Pfam match to entry PF00871 Acetate_kinase, FT Acetokinase family, score 716.4, E-value 1.1e-212" FT misc_feature 507280..507315 FT /note="PS01075 Acetate and butyrate kinases family FT signature 1." FT misc_feature 507883..507936 FT /note="PS01076 Acetate and butyrate kinases family FT signature 2." FT CDS 508693..510093 FT /transl_table=11 FT /locus_tag="BF9343_0409" FT /old_locus_tag="BF0425" FT /product="putative alkaline phosphatase" FT /note="Similar to Bacillus subtilis alkaline phosphatase IV FT precursor PhoA or PhoAIV SWALL:PPB4_BACSU (SWALL:P19406) FT (461 aa) fasta scores: E(): 6.4e-29, 33.76% id in 459 aa, FT and to Bacteroides thetaiotaomicron alkaline phosphatase FT III precursor BT3708 SWALL:AAO78813 (EMBL:AE016941) (467 FT aa) fasta scores: E(): 2.4e-144, 81.15% id in 467 aa, and FT to Bacillus subtilis alkaline phosphatase III precursor FT PhoB or PhoAIII SWALL:PPB3_BACSU (SWALL:P19405) (462 aa) FT fasta scores: E(): 3.9e-28, 33.99% id in 456 aa" FT /db_xref="GOA:Q5LI40" FT /db_xref="InterPro:IPR001952" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR018299" FT /db_xref="UniProtKB/TrEMBL:Q5LI40" FT /protein_id="CAH06188.1" FT /translation="MKRLFYFFLFVCVAVIANAQAKYVFYFIGDGMGVNQVNGTEMYRA FT EIQKGRIGVEPLLFTQFPVGTMATTFSATNSVTDSSAAGTALSTGEKTYNGSIGMDDQK FT NPLQTVAEKAKKAGKRVGVTTSVSVDHATPAAFYAHQPDRNMYYEIATDLPKAGFDFYA FT GAGFLKPTTTYDKKEAPSIFPMFEEAGYTIARGYNDYKAKAAAAGKMILIQEEGADTGS FT LPYAIDSKEGDLTLAQITESAIDFLTKGKNKGFFLMVEGGKIDWACHGNDAATVFHEVA FT DMDNAIKVAYEFYKKHPKETLIVVTADHETGGIALGTGKYALNLKALENQKASAEVLSK FT KISDLRKAKNNHVAWEDIKNLLSEEMGFWSVLPITWAQEKKLRDEYEKSFVRNKVEFAE FT SMYAKTEPMAAKAKEVMDQIAMVGWTSGGHSAGYVPVFAIGAGSDLFIGKMDNTEIPKR FT IAKAGGYK" FT misc_feature 508693..508749 FT /note="Signal peptide predicted for BF0425 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.650 between residues 19 and 20" FT misc_feature 508711..508779 FT /note="1 probable transmembrane helix predicted for BF0425 FT by TMHMM2.0 at aa 7-29" FT misc_feature 508735..509730 FT /note="Pfam match to entry PF00245 alk_phosphatase, FT Alkaline phosphatase, score 108.2, E-value 1.4e-29" FT misc_feature 508921..508947 FT /note="PS00123 Alkaline phosphatase active site." FT CDS 510152..510487 FT /transl_table=11 FT /locus_tag="BF9343_0410" FT /old_locus_tag="BF0426" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3696 SWALL:AAO78801 (EMBL:AE016941) FT (103 aa) fasta scores: E(): 3.7e-32, 86.4% id in 103 aa, FT and to Caulobacter crescentus hypothetical protein Cc1859 FT SWALL:Q9A767 (EMBL:AE005860) (118 aa) fasta scores: E(): FT 5.4e-16, 51.02% id in 98 aa, and to Methanosarcina FT acetivorans hypothetical protein Ma2398 SWALL:Q8TN95 FT (EMBL:AE010931) (98 aa) fasta scores: E(): 3.2e-15, 52.22% FT id in 90 aa" FT /db_xref="InterPro:IPR002744" FT /db_xref="UniProtKB/TrEMBL:Q5LI39" FT /protein_id="CAH06189.1" FT /translation="MNFQRNTDMTKFEIEEKIVDMLKTVFDPEIPVNVYDLGLIYKIDV FT SEDGEVSIDMTLTAPNCPAADFIMEDVRQKVESIDGVNSATINLVFEPEWDKDMMSEEA FT KLELGFL" FT misc_feature 510191..510418 FT /note="Pfam match to entry PF01883 DUF59, Domain of unknown FT function DUF59, score 114.2, E-value 2.2e-31" FT CDS 510533..511297 FT /transl_table=11 FT /locus_tag="BF9343_0411" FT /old_locus_tag="BF0427" FT /product="putative UDP-2,3-diacylglucosamine hydrolase" FT /note="Similar to Escherichia coli FT UDP-2,3-diacylglucosamine hydrolase LpxH or B0524 FT SWALL:LPXH_ECOLI (SWALL:P43341) (240 aa) fasta scores: E(): FT 3.1e-09, 26.75% id in 228 aa, and to Bacteroides FT thetaiotaomicron UDP-2,3-diacylglucosamine hydrolase BT3697 FT SWALL:AAO78802 (EMBL:AE016941) (254 aa) fasta scores: E(): FT 1.3e-101, 92.52% id in 254 aa, and to Chlorobium tepidum FT hypothetical protein CT1989 SWALL:Q8KB09 (EMBL:AE012949) FT (243 aa) fasta scores: E(): 6.1e-24, 34.81% id in 247 aa" FT /db_xref="GOA:Q5LI38" FT /db_xref="InterPro:IPR024654" FT /db_xref="UniProtKB/TrEMBL:Q5LI38" FT /protein_id="CAH06190.1" FT /translation="MKNVYFLSDAHLGSRAIEHGRTQERRLVNFLDSIKHKAAAVYLLG FT DMFDFWYEFRLVVPKGYTRFLGKLSELTDMGVEVHFFTGNHDIWCGDYLTKECGVTIHR FT EPVTTEIYGKEFYLAHGDGLGDPDKKFKLLRTMFHSRTLQTLFSAIHPRWSIDLGLNWA FT KHSRLKREGGKEPDYMGENKEFLVLYTKEYLKSHPNINFFIYGHRHIELDLMLSATARI FT LILGDWINFFSYAVFDGENLFLENYIEGETQL" FT misc_feature 510536..511165 FT /note="Pfam match to entry PF00149 Metallophos, FT Calcineurin-like phosphoesterase, score 30.5, E-value FT 3.4e-06" FT CDS complement(511327..512019) FT /transl_table=11 FT /gene="radC1" FT /locus_tag="BF9343_0412" FT /old_locus_tag="BF0428" FT /product="putative DNA repair protein" FT /note="Similar to Bacillus subtilis DNA repair protein RadC FT homolog SWALL:RADC_BACSU (SWALL:Q02170) (231 aa) fasta FT scores: E(): 4.3e-21, 33.77% id in 225 aa, and to FT Bacteroides thetaiotaomicron putative DNA repair protein FT BT3695 SWALL:AAO78800 (EMBL:AE016941) (231 aa) fasta FT scores: E(): 7.2e-68, 72.48% id in 229 aa, and to FT Methanosarcina acetivorans DNA repair protein RadC homolog FT or MA1979 SWALL:RADC_METAC (SWALL:Q8TPD4) (229 aa) fasta FT scores: E(): 5.2e-25, 32.17% id in 230 aa. Note: Also FT similar to BF1221 (151 aa) fasta scores: E(): 7.1e-17, FT 41.221% identity in 131 aa overlap and to BF1780 (148 aa) FT fasta scores: E(): 2.3e-14, 35.556% identity in 135 aa FT overlap" FT /db_xref="InterPro:IPR001405" FT /db_xref="InterPro:IPR020891" FT /db_xref="UniProtKB/TrEMBL:Q5LI37" FT /protein_id="CAH06191.1" FT /translation="MNKQKLNIKQWSKADRPREKMMTKGSEALSDAELLGILIGSGNTE FT ESAVELMRRILATCDNNLNELGKWEVRNFSSFKGMGPAKSLTIMAALELGKRRKLQESK FT EREQIRCSEDIYKLFHPLMCDLPQEEFWILLLNQACKVINKLRISTGGIDGTYADVRTI FT LREALIGRATQIALIHNHPSGHAKPSQEDKRLTGAIQKASQTMNITLVDHVIVCDGCFY FT SFADEGLI" FT misc_feature complement(511330..511704) FT /note="Pfam match to entry PF04002 RadC, RadC, DNA repair FT protein, score 115.4, E-value 9.2e-32" FT misc_feature complement(511468..511485) FT /note="PS01302 DNA repair protein radC family signature." FT CDS complement(512062..513090) FT /transl_table=11 FT /locus_tag="BF9343_0413" FT /old_locus_tag="BF0429" FT /product="putative glycosyltransferase" FT /note="Similar to Streptococcus pneumoniae glycosyl FT transferase Cap33fj or Cap37J SWALL:O86893 (EMBL:AJ006986) FT (323 aa) fasta scores: E(): 3.8e-10, 30.05% id in 183 aa, FT and to Bacteroides thetaiotaomicron glycosyltransferase FT BT3694 SWALL:AAO78799 (EMBL:AE016941) (404 aa) fasta FT scores: E(): 6.3e-93, 74.72% id in 368 aa, and to FT Methanosarcina mazei dolichyl-phosphate mannose synthase FT related protein MM1139 SWALL:Q8PXS7 (EMBL:AE013343) (339 FT aa) fasta scores: E(): 2.3e-17, 26.64% id in 319 aa" FT /db_xref="GOA:Q5LI36" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q5LI36" FT /protein_id="CAH06192.1" FT /translation="MPILNMKINYTYMMRYSVIIPVYNRPDEVDELLQSLTAQHFKDFE FT VVVVEDGSSVPCEKIVNQYQGKLDIHYYNKPNSGPGQTRNYGAERSNGEYLIILDSDCI FT LPEGYLDAVEKELQTAPADAFGGPDRAHSSFTDIQKAINYSMTSFFTTGGIRGGKKKMD FT KFYPRSFNMGVRREVYQALGGFSNMRFGEDIDFSIRIFKGGYQCRLFPDAWVYHKRRTD FT FKKFFKQVHNSGIARINLYKKYPESLKVVHLLPAVFTLGVALLLLCTPFCLFSLVPILL FT YALLVCLDSALQNKSLRIGIYSIAASFIQLIGYGTGFWRAWWERCILGRNEFEAFRKNF FT YK" FT misc_feature complement(order(512122..512190,512233..512301)) FT /note="2 probable transmembrane helices predicted for FT BF0429 by TMHMM2.0 at aa 264-286 and 301-323" FT misc_feature complement(512542..513042) FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferase, score 120.4, E-value 2.9e-33" FT CDS complement(513514..514080) FT /transl_table=11 FT /gene="efp" FT /locus_tag="BF9343_0414" FT /old_locus_tag="BF0431" FT /product="putative elongation factor P" FT /note="Similar to previously sequenced Bacteroides fragilis FT elongation factor P Efp SWALL:EFP_BACFR (SWALL:P70889) (185 FT aa) fasta scores: E(): 8.5e-68, 98.4% id in 188 aa, and to FT Bacteroides thetaiotaomicron elongation factor P Efp or FT BT3709 SWALL:AAO78814 (EMBL:AE016941) (188 aa) fasta FT scores: E(): 9.3e-70, 97.87% id in 188 aa, and to FT Mycobacterium tuberculosis elongation factor P Efp or FT Rv2534c or MT2609 or MTCY159.22 SWALL:EFP_MYCTU FT (SWALL:P95019) (187 aa) fasta scores: E(): 9.6e-32, 46.03% FT id in 189 aa" FT /db_xref="GOA:Q5LI35" FT /db_xref="HSSP:1UEB" FT /db_xref="InterPro:IPR001059" FT /db_xref="InterPro:IPR008991" FT /db_xref="InterPro:IPR011768" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR013185" FT /db_xref="InterPro:IPR013852" FT /db_xref="InterPro:IPR014722" FT /db_xref="InterPro:IPR015365" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR020599" FT /db_xref="UniProtKB/Swiss-Prot:Q5LI35" FT /protein_id="CAH06193.1" FT /translation="MINAQDIKNGTCIRMDGKLYFCIEFLHVKPGKGNTFMRTKLKDVV FT SGYVLERRFNIGEKLEDVRVERRPYQYLYKEGEDYIFMNQETFDQHPIAHDLINGVDFL FT LEGAVVEVVSDASTETVLYADMPIKVQMKVTYTEPGLKGDTATNTLKPATVESGATVRV FT PLFISEGETIEIDTRDGSYVGRVKA" FT misc_feature complement(513523..514080) FT /note="Pfam match to entry PF01132 EFP, Elongation factor P FT (EF-P), score 404.0, E-value 1.2e-118" FT misc_feature complement(513571..513630) FT /note="PS01275 Elongation factor P signature." FT CDS 514274..514435 FT /transl_table=11 FT /locus_tag="BF9343_0415" FT /old_locus_tag="BF0432" FT /product="50S ribosomal protein L34" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT Escherichia coli O157:H7, Salmonella typhimurium, FT Salmonella typhi, and Shigella flexneri 50S ribosomal FT protein L34 SWALL:RL34_ECOLI (SWALL:P02437) (46 aa) fasta FT scores: E(): 2.1e-10, 75.55% id in 45 aa, and to FT Bacteroides thetaiotaomicron 50S ribosomal protein L34 FT BT3710 SWALL:AAO78815 (EMBL:AE016941) (53 aa) fasta scores: FT E(): 3.2e-19, 96.15% id in 52 aa, and to Chlorobium tepidum FT 50S ribosomal protein L34 RpmH or CT0003 SWALL:RL34_CHLTE FT (SWALL:Q8KGG5) (53 aa) fasta scores: E(): 8.3e-14, 73.07% FT id in 52 aa" FT /db_xref="GOA:Q5LI34" FT /db_xref="InterPro:IPR000271" FT /db_xref="InterPro:IPR020939" FT /db_xref="UniProtKB/Swiss-Prot:Q5LI34" FT /protein_id="CAH06194.1" FT /translation="MKRTFQPSNRKRKNKHGFRERMATANGRRVLAARRAKGRKKLTVS FT DEYNGVKA" FT misc_feature 514274..514405 FT /note="Pfam match to entry PF00468 Ribosomal_L34, Ribosomal FT protein L34, score 74.6, E-value 1.7e-19" FT misc_feature 514277..514336 FT /note="PS00784 Ribosomal protein L34 signature." FT CDS 514647..515288 FT /transl_table=11 FT /locus_tag="BF9343_0416" FT /old_locus_tag="BF0433" FT /product="putative transmembrane PASTA-domain protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3711 SWALL:AAO78816 (EMBL:AE016941) FT (216 aa) fasta scores: E(): 1e-54, 68.51% id in 216 aa, and FT to Thermoanaerobacter tengcongensis probable FT serine/threonine-protein kinase Sps1 or TTE1500 FT SWALL:PKN1_THETN (SWALL:Q8R9T6) (625 aa) fasta scores: E(): FT 2.9e-06, 28.12% id in 192 aa, and to Corynebacterium FT glutamicum probable serine/threonine protein kinase Cgl0041 FT SWALL:PKN1_CORGL (SWALL:Q8NU98) (646 aa) fasta scores: E(): FT 2.5e-05, 29.81% id in 161 aa" FT /db_xref="GOA:Q5LI33" FT /db_xref="InterPro:IPR005543" FT /db_xref="UniProtKB/TrEMBL:Q5LI33" FT /protein_id="CAH06195.1" FT /translation="MTIKEFFSFKANRFFWINIIAMVVVAVLIVVGTLKGLDIYTRHGE FT AVIVPDVKGMSVSEAEKMFRNHGLTCVVSDSSYVKNKPSGIILDLNPSVGQKVKEGRTI FT YLTINTLSTPLSVVPDVADNSSVRQAQAKLIAAGFKLTENRMVSGEKDWVYGVIYQGRQ FT LQIGDKAPIGATLTLMVGDGVQSTATDSVDMVENAAMSVEDSGTDDDSWF" FT misc_feature 514680..514748 FT /note="1 probable transmembrane helix predicted for BF0433 FT by TMHMM2.0 at aa 12-34" FT misc_feature 514773..514976 FT /note="Pfam match to entry PF03793 PASTA, PASTA domain, FT score 43.8, E-value 3.3e-10" FT CDS 515318..516391 FT /transl_table=11 FT /gene="rluD" FT /gene_synonym="sfhB" FT /locus_tag="BF9343_0417" FT /old_locus_tag="BF0434" FT /product="ribosomal large subunit pseudouridine synthase" FT /EC_number="4.2.1.70" FT /note="Similar to Escherichia coli ribosomal large subunit FT pseudouridine synthase D RluD or SfhB or B2594 FT SWALL:RLUD_ECOLI (SWALL:P33643) (326 aa) fasta scores: E(): FT 1.9e-34, 40.97% id in 327 aa, and to Bacteroides FT thetaiotaomicron ribosomal large subunit pseudouridine FT synthase D BT3712 SWALL:AAO78817 (EMBL:AE016941) (357 aa) FT fasta scores: E(): 3.9e-134, 93.52% id in 355 aa, and to FT Chlorobium vibrioforme hypothetical 36.7 kDa protein in FT BchI 5'region SWALL:YBC5_CHLVI (SWALL:O50310) (327 aa) FT fasta scores: E(): 2.4e-53, 47.66% id in 321 aa" FT /db_xref="GOA:Q5LI32" FT /db_xref="InterPro:IPR002942" FT /db_xref="InterPro:IPR006145" FT /db_xref="InterPro:IPR006224" FT /db_xref="InterPro:IPR006225" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/TrEMBL:Q5LI32" FT /protein_id="CAH06196.1" FT /translation="MIEELPDDIEQDELDDIEPVGDENQLYEHFRVVVDKGQAMVRVDK FT YLFERIVNASRNRIQKAAEDGFVMANGKPVKSSYKVKPLDVITVMMDRPRYDNEIIPED FT IPLHIVYEDKYLMVVNKPAGLVVHPGHGNYHGTLVNAIAWHLKDNPDYDANDPHVGLVH FT RIDKDTSGLLVIAKTPDAKTNLGVQFFNKTTKRRYRALVWGIVDQDEGTIVGSIARNPK FT DRMQMAVMADPTQGKHAVTHYRVLERLGYVTLVECILETGRTHQIRVHMKHIGHVLFND FT ERYGGHEILKGTHFSKYKQFVNNCFDTCPRQALHAMTLGFVHPVTGEEMHFTSELPDDM FT TRLIEKWRGYISNRDLE" FT misc_feature 515438..515578 FT /note="Pfam match to entry PF01479 S4, S4 domain, score FT 35.0, E-value 1.5e-07" FT misc_feature 515660..516136 FT /note="Pfam match to entry PF00849 PseudoU_synth_2, RNA FT pseudouridylate synthase, score 231.6, E-value 9.7e-67" FT misc_feature 515801..515845 FT /note="PS01129 Rlu family of pseudouridine synthase FT signature." FT CDS 516388..517362 FT /transl_table=11 FT /gene="ddlA" FT /locus_tag="BF9343_0418" FT /old_locus_tag="BF0435" FT /product="putative D-Alanine-D-Alanine-Ligase" FT /note="Similar to Enterococcus faecalis VanE SWALL:Q93A46 FT (EMBL:AF430807) (352 aa) fasta scores: E(): 3.3e-28, 31.85% FT id in 339 aa, and to Bacteroides thetaiotaomicron FT D-Alanine--D-Alanine ligase BT3713 SWALL:AAO78818 FT (EMBL:AE016941) (324 aa) fasta scores: E(): 8.6e-113, FT 88.58% id in 324 aa, and to Neurospora crassa hypothetical FT protein B19a17.060 SWALL:CAD70534 (EMBL:BX284763) (346 aa) FT fasta scores: E(): 5.6e-42, 42.51% id in 334 aa" FT /db_xref="GOA:Q5LI31" FT /db_xref="HSSP:1IOW" FT /db_xref="InterPro:IPR000291" FT /db_xref="InterPro:IPR005905" FT /db_xref="InterPro:IPR011095" FT /db_xref="InterPro:IPR011127" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="UniProtKB/Swiss-Prot:Q5LI31" FT /protein_id="CAH06197.1" FT /translation="MKRNIAIVAGGDTSEIVVSLRSAQGIYSFIDKEKYNLYIVEMEGR FT RWEVQLQDGSKTPVDRNDFSFMNGAEKVVFDFAYITIHGTPGEDGRLQGYFDMIRIPYS FT CCGVLAAAITYDKFVCNQYLKAFGVRISESLLLRQGQAVSDEDVVEKIGLPCFIKPNLG FT GSSFGVTKVKTREQIQPAIAKAFSEAEEVMIEAFMGGTELTCGCYKTKEKSVVFPLTEV FT VTHNEFFDYDAKYNGQVDEITPARISEELTRRVQTLTSAIYDILGCSGIIRVDYIITEG FT EKINLLEVNTTPGMTATSFIPQQVRAAGLDIKDVMTDIIENKF" FT misc_feature 516388..517350 FT /note="Pfam match to entry PF01820 Dala_Dala_ligas, D-ala FT D-ala ligase, score 255.3, E-value 7e-74" FT misc_feature 516634..516669 FT /note="PS00843 D-alanine--D-alanine ligase signature 1." FT CDS 517503..518651 FT /transl_table=11 FT /locus_tag="BF9343_0419" FT /old_locus_tag="BF0436" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3714 SWALL:AAO78819 (EMBL:AE016941) FT (382 aa) fasta scores: E(): 3.9e-126, 80.89% id in 382 aa, FT and to Pseudomonas aeruginosa hypothetical protein Pa4636 FT SWALL:Q9HVF5 (EMBL:AE004878) (386 aa) fasta scores: E(): FT 8.4e-32, 32.66% id in 398 aa, and to Pseudomonas putida FT conserved hypothetical protein PP0756 SWALL:AAN66381 FT (EMBL:AE016776) (423 aa) fasta scores: E(): 9.4e-31, 32.91% FT id in 395 aa" FT /db_xref="GOA:Q5LI30" FT /db_xref="InterPro:IPR002123" FT /db_xref="UniProtKB/TrEMBL:Q5LI30" FT /protein_id="CAH06198.1" FT /translation="MNTTEFDEIRPYNDEELSGVFEELIADPAFQKVVAGVIPDVPFEM FT LAQKMRACRTKLEFQKTFCYGLLWKLAGDCTDGISLDHTAIPDKSKAYTYISNHRDIIL FT DSGFLSVLLVDQGMDTVEIAIGDNLLIYPWIKKFVRVNKSFIVQRALTMRQMLESSARM FT SRYMHYTIGEKNQSIWIAQREGRAKDSNDRTQDSVLKMLAMGGEGDVVSRLMEMNIAPL FT AISYEYDPCDYLKAQEFQLKRDIEGYKKTMADDLKNMQTGLFGYKGRVHFQTGACLNDL FT LSTVDRSLPKPELFARISTWIDQRIHSNYRLYPGNYVAHDLLTGKNDFESHYTLAEKER FT FEAYVEKQLEKIEIPNKDISFLREKLLLMYANPLTNYLAARQ" FT CDS 518648..519343 FT /transl_table=11 FT /locus_tag="BF9343_0420" FT /old_locus_tag="BF0437" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3715 SWALL:AAO78820 (EMBL:AE016941) (237 aa) FT fasta scores: E(): 3.5e-30, 45.02% id in 231 aa" FT /db_xref="InterPro:IPR024299" FT /db_xref="UniProtKB/TrEMBL:Q5LI29" FT /protein_id="CAH06199.1" FT /translation="MRIWTLHIVLSVLFSVFLFSCNEDDGAPYPSVRLEFLTAESGADG FT RLQTLVTDKGERLVVAEDRTESELLPNSSSRVVSNYEVLSSVGGRKEIRIYALANTVSP FT VPLPAGEFRNGLKFDPVDMLSIWMGRDYLNMTLSIRAQNARHTFHFIQESVERDAVTGK FT LKVHLMLYHDDGGDVEAYAKRAYVSVPLRQYTSDIGESVIIYFSFHTYDGEVQTYQFEY FT VPSHLTINY" FT CDS 519348..519743 FT /transl_table=11 FT /locus_tag="BF9343_0421" FT /old_locus_tag="BF0438" FT /product="conserved hypothetical rhodanese-domain protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3716 SWALL:AAO78821 (EMBL:AE016941) FT (130 aa) fasta scores: E(): 9.1e-34, 74.61% id in 130 aa, FT and to Oceanobacillus iheyensis hypothetical conserved FT protein ob1901 SWALL:Q8EQ22 (EMBL:AP004599) (124 aa) fasta FT scores: E(): 2.9e-07, 34.71% id in 121 aa, and to FT Shewanella oneidensis GlpE protein or so4672 SWALL:Q8E8J2 FT (EMBL:AE015899) (101 aa) fasta scores: E(): 3.3e-07, 37.62% FT id in 101 aa" FT /db_xref="InterPro:IPR001763" FT /db_xref="UniProtKB/TrEMBL:Q5LI28" FT /protein_id="CAH06200.1" FT /translation="MSKMNSMLMGICFLLSSLFSCQQSKGNFKTVPVKEFASLIEDASV FT QRLDVRTMAEYSEGHIPGTININVLDDSFAVMADSTLQKDKPVALYCRSGKRSKKAAAI FT LSEKGYKVYELDKGFNAWQEAGEKVEK" FT misc_feature 519441..519722 FT /note="Pfam match to entry PF00581 Rhodanese, FT Rhodanese-like domain, score 59.0, E-value 8.5e-15" FT CDS complement(519842..520798) FT /transl_table=11 FT /locus_tag="BF9343_0422" FT /old_locus_tag="BF0439" FT /product="putative ornithine carbamoyltransferase" FT /note="Similar to Pseudomonas aeruginosa ornithine FT carbamoyltransferase, anabolic ArgF or pa3537 FT SWALL:OTCA_PSEAE (SWALL:P11724) (304 aa) fasta scores: E(): FT 1.9e-09, 25.46% id in 326 aa, and to Bacteroides FT thetaiotaomicron ornithine carbamoyltransferase BT3717 FT SWALL:Q8A1E9 (EMBL:AE016941) (318 aa) fasta scores: E(): FT 3.8e-121, 93.37% id in 317 aa, and to Bacteroides forsythus FT transcarbamylase SWALL:AAO33834 (EMBL:AY184490) (177 aa) FT fasta scores: E(): 6.9e-48, 76.1% id in 159 aa" FT /db_xref="GOA:Q5LI27" FT /db_xref="InterPro:IPR002082" FT /db_xref="InterPro:IPR006130" FT /db_xref="InterPro:IPR006131" FT /db_xref="InterPro:IPR006132" FT /db_xref="PDB:2FG6" FT /db_xref="PDB:2FG7" FT /db_xref="UniProtKB/TrEMBL:Q5LI27" FT /protein_id="CAH06201.1" FT /translation="MKKFTCVQDIGDLKSALAESFEIKKDRFKYVELGRNKTLLMIFFN FT SSLRTRLSTQKAALNLGMNVIVLDINQGAWKLETERGVIMDGDKPEHLLEAIPVMGCYC FT DIIGVRSFARFENREYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLITIEEYKK FT TARPKVVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYD FT QMKAFEGADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTNNAYFMHCLPVRRNM FT IVTDDVIESPQSIVIPEAANREISATVVLKRLLENLP" FT misc_feature complement(519857..520243) FT /note="Pfam match to entry PF00185 OTCace, FT Aspartate/ornithine carbamoyltransferase, Asp/Orn binding FT domain, score -40.0, E-value 0.00015" FT misc_feature complement(520313..520795) FT /note="Pfam match to entry PF02729 OTCace_N, FT Aspartate/ornithine carbamoyltransferase, carbamoyl-P FT binding domain, score 6.0, E-value 7.2e-09" FT CDS complement(520852..521580) FT /transl_table=11 FT /locus_tag="BF9343_0423" FT /old_locus_tag="BF0440" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT1832 SWALL:AAO76939 (EMBL:AE016933) FT (215 aa) fasta scores: E(): 5.3e-52, 71.84% id in 206 aa, FT and to Vibrio parahaemolyticus hypothetical protein vpa1091 FT SWALL:BAC62434 (EMBL:AP005087) (213 aa) fasta scores: E(): FT 5.4e-35, 50% id in 216 aa, and to Chlorobium tepidum FT hypothetical protein CT1863 CT1863 SWALL:Q8KBC6 FT (EMBL:AE012937) (208 aa) fasta scores: E(): 1.1e-30, 48.69% FT id in 191 aa" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:Q5LI26" FT /protein_id="CAH06202.1" FT /translation="MQKVFLFLLLFLLPLAEVPNHAPASEPVSVASTPETDEIDQLFDD FT MQLDGIVSYTAFRQAVTGYQKIEQKSKSIMTLIDFSKPSTEKRLYVLDMKNKKLLYTSV FT VSHGKNSGGNYATSFSNKNGSYKSSLGFYLTENTYQGRNGYSLVLNGLEKGINDQAKQR FT AIVMHGAAYANPNITASAGRLGRSLGCPALPQALAKPIIDTIKKGSVLFIYANNKDYLA FT NSTFLSPRQTEYLSWAQPAN" FT misc_feature complement(521533..521580) FT /note="Signal peptide predicted for BF0440 by SignalP 2.0 FT HMM (Signal peptide probability 0.970) with cleavage site FT probability 0.536 between residues 16 and 17" FT CDS complement(521619..522641) FT /transl_table=11 FT /locus_tag="BF9343_0424" FT /old_locus_tag="BF0441" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT1831 SWALL:AAO76938 (EMBL:AE016933) FT (348 aa) fasta scores: E(): 6.9e-94, 71.21% id in 330 aa, FT and to Fusobacterium nucleatum hypothetical protein Fn0336 FT FN0336 SWALL:Q8RGG2 (EMBL:AE010545) (240 aa) fasta scores: FT E(): 2.3e-09, 31.25% id in 176 aa" FT /db_xref="GOA:Q5LI25" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:Q5LI25" FT /protein_id="CAH06203.1" FT /translation="MKQTAYIYLLTLSCLLCACNRENRTNLPQPQVTGVADSLETVPPE FT EKPKAISAEQIEIKKDLLYDKYTLEDTYPYKDTTRSFQWDKIKERLALLENIQQTPSQW FT GILQNYKNRNGEAPLVRHYKRNAYKRIADTLGIERYQSVPLYLLTDTLVPERYGEDGSL FT VRFLADGENFVKVSPIYIGEEWYVPKRYVKVLPDTTHFIKTIMIDRRDQNIMTLEQTGE FT AQWTVRSMNPATTGRHRPPYAQETPLGIFVLQEKKTRMIFLKDGSTATGGFAPYASRFS FT DGGYIHGVPVNEPRKALIEYSPSLGTTPRSHMCVRNATSHSKFIFDWAPVNETIIFVLE FT " FT CDS complement(523129..524376) FT /transl_table=11 FT /gene="proA" FT /locus_tag="BF9343_0425" FT /old_locus_tag="BF0443" FT /product="putative gamma-glutamyl phosphate reductase" FT /EC_number="1.2.1.41" FT /note="Similar to Streptococcus pneumoniae gamma-glutamyl FT phosphate reductase ProA or sp0932 SWALL:PROA_STRPN FT (SWALL:Q97R94) (420 aa) fasta scores: E(): 1.2e-63, 45.08% FT id in 417 aa, and to Bacteroides thetaiotaomicron FT gamma-glutamyl phosphate reductase BT3718 SWALL:AAO78823 FT (EMBL:AE016941) (417 aa) fasta scores: E(): 2.3e-135, FT 83.29% id in 413 aa, and to Chlorobium tepidum FT gamma-glutamyl phosphate reductase ProA or CT1473 FT SWALL:Q8KCE9 (EMBL:AE012904) (420 aa) fasta scores: E(): FT 4.4e-94, 61.33% id in 406 aa" FT /db_xref="GOA:Q5LI24" FT /db_xref="InterPro:IPR000965" FT /db_xref="InterPro:IPR012134" FT /db_xref="InterPro:IPR016161" FT /db_xref="InterPro:IPR016162" FT /db_xref="InterPro:IPR016163" FT /db_xref="InterPro:IPR020593" FT /db_xref="UniProtKB/Swiss-Prot:Q5LI24" FT /protein_id="CAH06204.1" FT /translation="MNLNDTFAAVQAAGRHLALLPDDRINQILNAVAEAALEQTSYILS FT ENRKDLERMSPDNPKYDRLRLTEERLRGIASDIRNVATLPSPLGRILKESIRPNGMRLT FT KISVPFGVIGIIYEARPNVSFDVFSLCLKSGNACILKGGSDADYSNRAIVEVIHQVLRQ FT FNIDTHMVELLPADREATRELLHATGYVDLIIPRGSSALINFVRQNATIPVIETGAGIC FT HTYFDEYGDTAKGAAIIHNAKTRRVSVCNALDCVIVHESRLSDLPLLCEKLKADKVIIY FT ADPSAYQALEGHYPAGLLKPATPESFGTEFLDYKMAIKTVNSFENALGHIQEYSSRHSE FT SIVTENPERAALFTRMVDAACVYTNVSTAFTDGAQFGLGAEIGISTQKLHARGPMGLEE FT ITSYKWIIEGDGQTRQ" FT misc_feature complement(523351..523416) FT /note="PS01223 Gamma-glutamyl phosphate reductase FT signature." FT CDS complement(524389..525471) FT /transl_table=11 FT /gene="proB" FT /locus_tag="BF9343_0426" FT /old_locus_tag="BF0444" FT /product="putative glutamate kinase" FT /EC_number="2.7.2.11" FT /note="Similar to Bacillus subtilis glutamate 5-kinase 2 FT ProJ SWALL:PROJ_BACSU (SWALL:O07509) (371 aa) fasta scores: FT E(): 1.6e-35, 33.43% id in 338 aa, and to Bacteroides FT thetaiotaomicron glutamate 5-kinase BT3719 SWALL:Q8A1E7 FT (EMBL:AE016941) (360 aa) fasta scores: E(): 1.5e-113, FT 85.27% id in 360 aa, and to Chlorobium tepidum glutamate FT 5-kinase ProB or CT1457 SWALL:PROB_CHLTE (SWALL:Q8KCG4) FT (361 aa) fasta scores: E(): 6.7e-58, 49.44% id in 358 aa" FT /db_xref="GOA:Q5LI23" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR001057" FT /db_xref="InterPro:IPR002478" FT /db_xref="InterPro:IPR005715" FT /db_xref="InterPro:IPR011529" FT /db_xref="InterPro:IPR015947" FT /db_xref="InterPro:IPR019797" FT /db_xref="UniProtKB/TrEMBL:Q5LI23" FT /protein_id="CAH06205.1" FT /translation="MKKEFTRIAIKVGSNVLTRQDGTLDVTRMSALTDQIAALHKAGVE FT VILISSGAVASGRSEIRTLRKLDSVDQRQLFSAVGQAKLINRYYELFRDHGIAVGQVLT FT TKENFGTRRHYLNQKNCMTVMLENGVIPIVNENDTISVTELMFTDNDELSGLIASMMNA FT QALIILSNIDGIYNGSPSDPDSLVIREIGQGKDLSNYIQTSKSSFGRGGMLTKTNIARK FT VADEGITVIIANGKRDNILINLIEHPEETVCTRFIPASQPVSSIKKWIAHSEGFAKGEI FT HINEQATEVLNSDKAVSILPVGITRIEGEFEKDDIVRIIDYRGTPVGVGKVNCDSMQAR FT DSIGKHGKKAVVHYDYLYIE" FT misc_feature complement(524404..524637) FT /note="Pfam match to entry PF01472 PUA, PUA domain, score FT 28.3, E-value 1.5e-05" FT misc_feature complement(524770..525456) FT /note="Pfam match to entry PF00696 aakinase, Amino acid FT kinase family, score 150.2, E-value 3.1e-42" FT CDS complement(525585..525821) FT /transl_table=11 FT /locus_tag="BF9343_0427" FT /old_locus_tag="BF0445" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3721 SWALL:AAO78826 (EMBL:AE016941) (77 aa) fasta FT scores: E(): 5e-12, 53.24% id in 77 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LI22" FT /protein_id="CAH06206.1" FT /translation="MKEDKDTRVVEVFTGSPWEAEFIKGLLESNGIESILKDGGGLAAL FT APYYIGQEIAVLVNEDDYENAMEIVRNREKANE" FT CDS complement(525898..526740) FT /transl_table=11 FT /gene="murI" FT /gene_synonym="glr" FT /locus_tag="BF9343_0428" FT /old_locus_tag="BF0446" FT /product="putative glutamate racemase" FT /EC_number="5.1.1.3" FT /note="Similar to Bacillus subtilis var. natto glutamate FT racemase MurI or Glr SWALL:MURI_BACNA (SWALL:O82826) (271 FT aa) fasta scores: E(): 1.6e-28, 36.99% id in 273 aa, and to FT Bacteroides thetaiotaomicron glutamate racemase BT3722 FT SWALL:AAO78827 (EMBL:AE016941) (280 aa) fasta scores: E(): FT 1.1e-96, 81.07% id in 280 aa, and to Bacillus subtilis FT glutamate Racemase 1 RacE SWALL:MUI1_BACSU (SWALL:P94556) FT (272 aa) fasta scores: E(): 1.4e-28, 36.99% id in 273 aa" FT /db_xref="GOA:Q5LI21" FT /db_xref="InterPro:IPR001920" FT /db_xref="InterPro:IPR004391" FT /db_xref="InterPro:IPR015942" FT /db_xref="InterPro:IPR018187" FT /db_xref="UniProtKB/TrEMBL:Q5LI21" FT /protein_id="CAH06207.1" FT /translation="MKQSLPYQPGPIGVFDSGYGGLTILSKIREALPEYDYIYLGDNAR FT TPYGTRSFEIVYEFTLQAVNKLFEMGCHLVILACNTASAKALRTIQMNDLPNIDPDRRV FT LGVIRPTAECIGSMTQTRHVGILATAGTIKSESYPLEVHKLFEDIKVSGEACPMWVPLV FT ENNEANGEGADFFIRKYIDNLLAKDRQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQG FT EYVATSLKDYLHRHPEMDMKCTREGKCRFYTTEAEDKFIESASMFLNENITVQRITLE" FT misc_feature complement(526039..526710) FT /note="Pfam match to entry PF01177 Asp_Glu_race, FT Asp/Glu/Hydantoin racemase, score 211.9, E-value 8.5e-61" FT misc_feature complement(526129..526161) FT /note="PS00924 Aspartate and glutamate racemases signature FT 2." FT misc_feature complement(526489..526515) FT /note="PS00923 Aspartate and glutamate racemases signature FT 1." FT CDS complement(526843..527352) FT /transl_table=11 FT /locus_tag="BF9343_0429" FT /old_locus_tag="BF0447" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein OmpH BT3723 SWALL:Q8A1E3 FT (EMBL:AE016941) (157 aa) fasta scores: E(): 3.6e-36, 80.89% FT id in 157 aa, and limited similarity to Chlorobium tepidum FT outer membrane protein OmpH or CT0254 SWALL:Q8KFR8 FT (EMBL:AE012804) (183 aa) fasta scores: E(): 0.0046, 28.65% FT id in 171 aa. Possible alternative start site at codon 15" FT /db_xref="GOA:Q5LI20" FT /db_xref="InterPro:IPR005632" FT /db_xref="InterPro:IPR024930" FT /db_xref="UniProtKB/TrEMBL:Q5LI20" FT /protein_id="CAH06208.1" FT /translation="MLKKIALLMMLILPMGVFAQNLKFGHINAMEIVSAMPEYTKAQSE FT LQALNKQLGQDLQRSQEEFSKKYQEFMQQKDSLPAVIAERRQKELEDMMQRQEQFQAKA FT QQDMEKANNDLMAPVYKKLDDAIKAVGAAEGVIYIFDMARTPIPYVNEAQSINLTPKVK FT TQLGIK" FT misc_feature complement(526852..527352) FT /note="Pfam match to entry PF03938 OmpH, Outer membrane FT protein (OmpH-like), score 26.7, E-value 1.3e-05" FT misc_feature complement(527296..527352) FT /note="Signal peptide predicted for BF0447 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.999 between residues 19 and 20" FT CDS complement(527410..527925) FT /transl_table=11 FT /gene="ompH" FT /locus_tag="BF9343_0430" FT /old_locus_tag="BF0448" FT /product="putative cationic 19 kDa outer membrane protein FT precursor" FT /note="Similar to Yersinia enterocolitica cationic 19 kDa FT outer membrane protein precursor OmpH SWALL:OMPH_YEREN FT (SWALL:P31519) (164 aa) fasta scores: E(): 2.8e-05, 26.58% FT id in 158 aa, and to Bacteroides thetaiotaomicron cationic FT outer membrane protein precursor BT3724 SWALL:AAO78829 FT (EMBL:AE016941) (171 aa) fasta scores: E(): 8.6e-37, 71.34% FT id in 171 aa, and to Yersinia enterocolitica automembrane FT protein H SWALL:O05360 (EMBL:Y12468) (164 aa) fasta scores: FT E(): 1.3e-05, 27.21% id in 158 aa" FT /db_xref="GOA:Q5LI19" FT /db_xref="InterPro:IPR005632" FT /db_xref="InterPro:IPR024930" FT /db_xref="UniProtKB/TrEMBL:Q5LI19" FT /protein_id="CAH06209.1" FT /translation="MKKSVLFIILLFAVGMTAQAQKFALIDMEYILKNIPAYERANEQL FT SQATKQWQGEVEVLAKEAQTMFKDYQAASAKLTAAQKTQKEDAIVEKEKAASELKRKYF FT GPEGELFKKREELMKPIQDEIYNAVKAVAEENGYAVVVDRASASSIIFATPRIDVSNEV FT LAKLGYSN" FT misc_feature complement(527422..527925) FT /note="Pfam match to entry PF03938 OmpH, Outer membrane FT protein (OmpH-like), score 63.9, E-value 3e-16" FT misc_feature complement(527866..527925) FT /note="Signal peptide predicted for BF0448 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.987 between residues 20 and 21" FT CDS complement(527950..530478) FT /transl_table=11 FT /locus_tag="BF9343_0431" FT /old_locus_tag="BF0449" FT /product="putative outer membrane protein" FT /note="Similar to Neisseria meningitidis outer membrane FT protein Omp85 NMB0182 SWALL:Q9K1H0 (EMBL:AE002375) (797 aa) FT fasta scores: E(): 9.7e-26, 24.94% id in 870 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein BT3725 SWALL:AAO78830 (EMBL:AE016941) (885 aa) FT fasta scores: E(): 0, 83.62% id in 849 aa, and to FT Chlorobium tepidum bacterial surface antigen family protein FT CT0266 SWALL:Q8KFQ6 (EMBL:AE012805) (836 aa) fasta scores: FT E(): 1.6e-54, 33.25% id in 854 aa" FT /db_xref="GOA:Q5LI18" FT /db_xref="InterPro:IPR010827" FT /db_xref="InterPro:IPR016474" FT /db_xref="UniProtKB/TrEMBL:Q5LI18" FT /protein_id="CAH06210.1" FT /translation="MYSGTPKKYEIADIKVEGVKNYEDYVLIGLSGLSVGQTITVPGDE FT ITGAIKRYWRHGLFSNVSITAEKIEGNKIWLKITLAQRPRISDIRYHGVKKSEREDLQT FT KLGMIKGSQITPNLVDRAKVLSKRYFDDKGFKNAEITITQRDDPANENQVLVDIDIDKK FT EKVKVHAITFAGNHAIKTSKLKRVMKKTNEKGKLLNLFRTKKFVNEKYEEDKQLIIDKY FT NELGYRDARIVKDSVSKFDDKTVDVFIELEEGDKYYLRNVTWVGNTLYPSEQLNYMLRM FT KKGDVYNQKLLNERLSTDEDAIGNLYYNNGYLFYTLDPVEVNIDNDSIDLEMRIFEGRQ FT ASINKIKINGNDRLYENVVRRELRTRPGELFSREDLMRSMREIQQMGHFDPENIKPDIQ FT PDPVNGTVDIAYDLVSKANDQVEFSAGWGQTGVIGKLSLKFTNFSLANLLHPGENYRGI FT LPQGDGQTLTISGQTNAQYYQQYSISFFDPWFGGKRPNSFSLSAFFSVQTDISSRYYNS FT SYYNNYYNSYYSGLGGYGMYNYGNYNNYENYYDPDKSIKMWGLSAGWGKRLNWPDDYFQ FT LSAELSYQRYILKDWQYFPVTNGKCNDLSIGLTLARASYDNPIYPRSGSDFSLSVQFTP FT PYSLFDGVDYSKYNEYNQNDMNKMHKWVEYHKWKFKAKTYIPLLNPTVVKKTPVLMTRV FT EFGILGHYNKYKKSPFGTFDVGGDGMTGYSSYATESVALRGYENSSLTPYRGQEGYAYT FT RIGFELRYPLMLETSTNIYALTFLEAGNAWHDVKNFNPFDLKRSAGVGVRIFLPMIGMM FT GIDWAYGFDKVLGDKSAGGSRFHFVLGQEF" FT misc_feature complement(527953..529377) FT /note="Pfam match to entry PF01103 Bac_surface_Ag, Surface FT antigen, score -19.7, E-value 3.1e-06" FT CDS complement(530609..531343) FT /transl_table=11 FT /gene="uppS" FT /gene_synonym="rth" FT /locus_tag="BF9343_0432" FT /old_locus_tag="BF0450" FT /product="putative undecaprenyl pyrophosphate synthetase" FT /EC_number="2.5.1.31" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT Escherichia coli O157:H7, and Shigella flexneri FT undecaprenyl pyrophosphate synthetase UppS or Rth or B0174 FT or C0211 or Z0185 or ECS0176 or SF0164 SWALL:UPPS_ECOLI FT (SWALL:Q47675) (253 aa) fasta scores: E(): 8e-41, 47.36% id FT in 228 aa, and to Bacteroides thetaiotaomicron undecaprenyl FT pyrophosphate synthetase BT3726 SWALL:AAO78831 FT (EMBL:AE016941) (244 aa) fasta scores: E(): 2.5e-80, 78.27% FT id in 244 aa, and to Chlorobium tepidum undecaprenyl FT diphosphate synthase UppS or CT0267 SWALL:Q8KFQ5 FT (EMBL:AE012805) (265 aa) fasta scores: E(): 2e-49, 52.13% FT id in 234 aa" FT /db_xref="GOA:Q5LI17" FT /db_xref="InterPro:IPR001441" FT /db_xref="InterPro:IPR018520" FT /db_xref="UniProtKB/TrEMBL:Q5LI17" FT /protein_id="CAH06211.1" FT /translation="MSYKEQIDLNRIPKHVAIIMDGNGRWAKLRGHERSFGHQAGAETV FT HIITEEAARLGIKFLTLYTFSTENWNRPSDEVAALMSLLFDSIEEETFMKNNISFRIIG FT DINKLPENVRERLNACVEHTSKNTGMCLILALSYSARWEITEATRQIATLVQNGEMNPE FT EITSESIRTHLTTNFMPDPDLLIRTGGEVRLSNYLLWQCAYSELYFCETFWPDFKEEEL FT CKAICDYQKRERRFGKTSEQIS" FT misc_feature complement(530630..531289) FT /note="Pfam match to entry PF01255 UPP_synthetase, Putative FT undecaprenyl diphosphate synthase, score 367.9, E-value FT 9.3e-108" FT misc_feature complement(530744..530797) FT /note="PS01066 Undecaprenyl pyrophosphate synthetase family FT signature." FT CDS complement(531348..532706) FT /transl_table=11 FT /locus_tag="BF9343_0433" FT /old_locus_tag="BF0451" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3727 SWALL:AAO78832 (EMBL:AE016941) (493 aa) FT fasta scores: E(): 4.2e-29, 40.44% id in 497 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LI16" FT /protein_id="CAH06212.1" FT /translation="MRIKFLSVIVSFFLVSFAVTSCLDTEEIEYSPDATIHAFALDTIH FT GVNYKFTIDQLGPDGVGLIYNQDSLPVGSDTIIDRILIKTLTTTSGIITAKNAEGQDTL FT FNYSDSIDFRGTMQKPMRIKVWAADMQYTKEYTISVRVHQQDPDSMNWTKMTDNFANYS FT GYQKSVTLNEDLLIYTSNTTAYQSSGDVISKGRSWTPVSITGLPDNIKLSSIISFGGKL FT YATNGESAYVSSDGALWNVATDLNKNGKVEMLIAPFPKNEGNLLGISGIAGIINNGDQS FT TFAITNPEATAWNIGSETVGADFPLENLSATSYLTATGIQTIAVMGNNRNANDTTSIAW FT TSQDGLLWIPLKTSSSTAYCPKLDNPSFFYYDNAFLAFGGNFETIYTSEAGIAWYKANK FT KIFLPAEFKDRGNNYSTVVDKNNFIWVIWSNGGANEVWRGRINKFGFKRQNNN" FT misc_feature complement(532641..532673) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature complement(532644..532706) FT /note="Signal peptide predicted for BF0451 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.710 between residues 21 and 22" FT CDS complement(532845..533867) FT /transl_table=11 FT /locus_tag="BF9343_0434" FT /old_locus_tag="BF0452" FT /product="putative riboflavin biosynthesis protein FT [includes: diaminohydroxyphosphoribosylaminopyrimidine FT deaminase" FT /note="Similar to Bacillus amyloliquefaciens riboflavin FT biosynthesis protein RibD [includes: FT diaminohydroxyphosphoribosylaminopyrimidine deaminase] RibD FT or RibG SWALL:RIBD_BACAM (SWALL:P70814) (371 aa) fasta FT scores: E(): 1.7e-35, 37.53% id in 325 aa, and to FT Bacteroides thetaiotaomicron riboflavin biosynthesis FT protein RibD BT3728 SWALL:Q8A1D8 (EMBL:AE016942) (339 aa) FT fasta scores: E(): 2.8e-101, 74.4% id in 336 aa, and to FT Chlorobium tepidum riboflavin biosynthesis protein RibD or FT CT0747 SWALL:Q8KEE2 (EMBL:AE012844) (373 aa) fasta scores: FT E(): 6.7e-48, 42.07% id in 347 aa" FT /db_xref="GOA:Q5LI15" FT /db_xref="InterPro:IPR002125" FT /db_xref="InterPro:IPR002734" FT /db_xref="InterPro:IPR004794" FT /db_xref="InterPro:IPR016192" FT /db_xref="InterPro:IPR016193" FT /db_xref="InterPro:IPR024072" FT /db_xref="UniProtKB/TrEMBL:Q5LI15" FT /protein_id="CAH06213.1" FT /translation="MRRCIQLAKNGLCNVSPNPMVGAVIVCEGQIIGEGYHIRCGEAHA FT EVNAIRSVKDPSLLKHSTIYVSLEPCSHHGKTPPCADLIIEKQIPRIVIGCQDPFSKVA FT GKGIQKLRDAGCEVIVGVLETECRELIRKFITFHTLHRPYIVLKWAESADGFIDLERTE FT GQPVILSTPLTSMLVHKKRAESDAIMVGTRTALLDNPALTVRNWYGHNPVRIVMDRNHS FT LPQTSHLSDNSVSTLVFTEHPRSGKENLEYITLNYQTDILPQILSALYQRNLQSLMIEG FT GRILLESFIRSGIWDEVIIEKSDKLIYSGVKAPEISDKISYSEEKHFCTTFRHYLKRNT FT " FT misc_feature complement(532905..533438) FT /note="Pfam match to entry PF01872 RibD_C, RibD C-terminal FT domain, score 86.9, E-value 3.5e-23" FT misc_feature complement(533580..533807) FT /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine FT and deoxycytidylate deaminase zinc-binding region, score FT 60.6, E-value 2.9e-15" FT misc_feature complement(533616..533738) FT /note="PS00903 Cytidine and deoxycytidylate deaminases FT zinc-binding region signature." FT CDS 533939..534775 FT /transl_table=11 FT /locus_tag="BF9343_0435" FT /old_locus_tag="BF0453" FT /product="putative protoporphyrinogen oxidase" FT /note="Similar to Porphyromonas gingivalis FT protoporphyrinogen oxidase HemK SWALL:Q9LBR0 FT (EMBL:AB037921) (293 aa) fasta scores: E(): 2.5e-30, 41.03% FT id in 290 aa, and to Bacteroides thetaiotaomicron putative FT protoporphyrinogen oxidase BT3729 SWALL:AAO78834 FT (EMBL:AE016942) (278 aa) fasta scores: E(): 1.9e-69, 66.18% FT id in 278 aa, and to Streptococcus mutans putative FT protoporphyrinogen oxidase Hemk or SMU.1084 SWALL:Q8DU65 FT (EMBL:AE014946) (278 aa) fasta scores: E(): 2.4e-30, 42.08% FT id in 259 aa" FT /db_xref="GOA:Q5LI14" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR004556" FT /db_xref="InterPro:IPR007848" FT /db_xref="InterPro:IPR019874" FT /db_xref="UniProtKB/TrEMBL:Q5LI14" FT /protein_id="CAH06214.1" FT /translation="MNHVTTYIRQALHDIYPPGELRSLTKIICCDLLGQDAIDYYLGKD FT ITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRVAPGVLIPRPETEELVDLIV FT KEAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAWDVSEEALAIAGENNRELKAGVHFE FT KMDVLSAEPVGDDQYDMIVSNPPYVTESEKNEMEPNVLDWEPRLALFVPDNDPLRFYRR FT IASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYEELRLIKDISGNDRIVTAKR" FT misc_feature 534479..534499 FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT CDS 534772..535236 FT /transl_table=11 FT /locus_tag="BF9343_0436" FT /old_locus_tag="BF0454" FT /product="putative transcriptional regulatory protein" FT /note="Limited similarity to Pseudomonas aeruginosa FT regulatory protein RecX or PA3616 SWALL:RECX_PSEAE FT (SWALL:P37860) (153 aa) fasta scores: E(): 0.00014, 29.13% FT id in 127 aa, and to Bacteroides thetaiotaomicron putative FT regulatory protein BT3730 SWALL:AAO78835 (EMBL:AE016942) FT (160 aa) fasta scores: E(): 9.5e-46, 74.17% id in 151 aa, FT and to Clostridium tetani transcriptional regulatory FT protein CTC02337 SWALL:AAO36813 (EMBL:AE015944) (216 aa) FT fasta scores: E(): 1.1e-06, 30.89% id in 123 aa" FT /db_xref="GOA:Q5LI13" FT /db_xref="InterPro:IPR003783" FT /db_xref="UniProtKB/TrEMBL:Q5LI13" FT /protein_id="CAH06215.1" FT /translation="MNTITEEEALNRMAAYCSAAEHCKAEVNEKLQKWGLPYEVINRII FT DRLVVEKFIDEERYCRAFVNDKFRFAKWGKMKITQALYMKKIPREVTYRYLNDIDREEY FT LAILGDLIAAKRKSIHAKDEFELNGKLIRFAMSRGFEMDDIRRCVQVEEE" FT misc_feature 534862..535233 FT /note="Pfam match to entry PF02631 RecX, RecX family, score FT 13.6, E-value 1.1e-05" FT CDS 535332..535970 FT /transl_table=11 FT /gene="pyrE" FT /locus_tag="BF9343_0437" FT /old_locus_tag="BF0455" FT /product="putative orotate phosphoribosyltransferase" FT /EC_number="2.4.2.10" FT /note="Similar to Bacillus caldolyticus orotate FT phosphoribosyltransferase PyrE SWALL:PYRE_BACCL FT (SWALL:P46534) (206 aa) fasta scores: E(): 3.7e-36, 51% id FT in 200 aa, and to Bacteroides thetaiotaomicron orotate FT phosphoribosyltransferase BT3731 SWALL:AAO78836 FT (EMBL:AE016942) (212 aa) fasta scores: E(): 9.1e-77, 96.22% FT id in 212 aa, and to Listeria innocua orotate FT phosphoribosyltransferase PyrE or LIN1945 SWALL:PYRE_LISIN FT (SWALL:Q92AH7) (209 aa) fasta scores: E(): 3.4e-39, 53.39% FT id in 206 aa" FT /db_xref="GOA:Q5LI12" FT /db_xref="HSSP:1ZN8" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR004467" FT /db_xref="InterPro:IPR023031" FT /db_xref="UniProtKB/Swiss-Prot:Q5LI12" FT /protein_id="CAH06216.1" FT /translation="MKNLERLFAEKLLKIKAIKLQPANPFTWASGWKSPFYCDNRKTLS FT YPSLRSFVKFEITRLVLERFGQVDAIAGVATGAIPQGALVADALNLPFVYVRSTPKDHG FT LENLIEGELRPGMKVVVVEDLISTGGSSLKAVEAIRRDGCEVIGMVAAYTYGFPVAEQA FT FKDAKVPLVTLTNYEAVLDVALRTGYIEEEDIATLNEWRKDPAHWETGK" FT misc_feature 535440..535865 FT /note="Pfam match to entry PF00156 Pribosyltran, FT Phosphoribosyl transferase domain, score 109.1, E-value FT 7.1e-30" FT misc_feature 535686..535724 FT /note="PS00103 Purine/pyrimidine phosphoribosyl FT transferases signature." FT CDS 536070..536480 FT /transl_table=11 FT /locus_tag="BF9343_0438" FT /old_locus_tag="BF0456" FT /product="putative conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3732 SWALL:AAO78837 (EMBL:AE016942) (136 aa) FT fasta scores: E(): 6.4e-41, 77.2% id in 136 aa" FT /db_xref="InterPro:IPR019587" FT /db_xref="InterPro:IPR023393" FT /db_xref="UniProtKB/TrEMBL:Q5LI11" FT /protein_id="CAH06217.1" FT /translation="MTKFESSVKVIPYSQERVYEKLADLSNLEAIKDRLPEDKVKNMSF FT DTDTLSFNVDPVGQLTLRIIEREPSKCIKFETTNSPLPFNMWIQLVAVSEEECKLKVTI FT GLEINPFMKAMVQKPLNEGLEKMADMLSMIQY" FT CDS 536486..537829 FT /transl_table=11 FT /gene="argH" FT /locus_tag="BF9343_0439" FT /old_locus_tag="BF0457" FT /product="putative argininosuccinate lyase" FT /EC_number="4.3.2.1" FT /note="Similar to Escherichia coli argininosuccinate lyase FT ArgH or B3960 SWALL:ARLY_ECOLI (SWALL:P11447) (457 aa) FT fasta scores: E(): 9.3e-42, 35.99% id in 389 aa, and to FT Bacteroides thetaiotaomicron argininosuccinate lyase BT3733 FT SWALL:AAO78838 (EMBL:AE016942) (446 aa) fasta scores: E(): FT 3.5e-169, 94.61% id in 446 aa, and to Xylella fastidiosa FT argininosuccinate lyase ArgH or PD0295 SWALL:AAO28180 FT (EMBL:AE012554) (445 aa) fasta scores: E(): 7.1e-47, 34.74% FT id in 426 aa" FT /db_xref="GOA:Q5LI10" FT /db_xref="HSSP:1AOS" FT /db_xref="InterPro:IPR000362" FT /db_xref="InterPro:IPR003031" FT /db_xref="InterPro:IPR008948" FT /db_xref="InterPro:IPR009049" FT /db_xref="InterPro:IPR020557" FT /db_xref="InterPro:IPR022761" FT /db_xref="UniProtKB/Swiss-Prot:Q5LI10" FT /protein_id="CAH06218.1" FT /translation="MAQKLWEKSVEVNKDIERFTVGRDREMDLYLAKHDVLGSMAHITM FT LESIGLLTKEELAQLLTELKDIYASAERGEFVIEEGVEDVHSQVELMLTRRLGDVGKKI FT HSGRSRNDQVLLDLKLFTRTQIREVAEAVEQLFHVLIRQSERYKNVLMPGYTHLQIAMP FT SSFGLWFGAYAESLVDDMLFLQAAFKMCNKNPLGSAAGYGSSFPLNRTMTTELLGFDSL FT NYNVVYAQMGRGKMERNVAFALATLAGTISKLAFDACIFNSQNFGFVKLPDECTTGSSI FT MPHKKNPDVFELTRAKCNKLQSLPQQIMMIANNLPSGYFRDLQIIKEVFLPAFQELKDC FT LQMTTYIMNEIKVNEHILDDDKYLFIFSVEEVNRLAREGMPFRDAYKKVGLDIEAGHFS FT HDKQVHHTHEGSIGNLCNDEISALMQRTIEGFNFQGMEQAEKTLLGRK" FT misc_feature 536534..537739 FT /note="Pfam match to entry PF00206 lyase_1, Lyase, score FT 125.0, E-value 1.1e-34" FT misc_feature 537317..537346 FT /note="PS00163 Fumarate lyases signature." FT tRNA 537974..538046 FT /note="tRNA Gly anticodon GCC, Cove score 84.53" FT CDS complement(538014..539741) FT /transl_table=11 FT /locus_tag="BF9343_0440" FT /old_locus_tag="BF0458" FT /product="putative bacteriophage resolvase/recombinase" FT /note="Similar to Lactococcus lactis bacteriophage TP901-1 FT Integrase Int SWALL:Q38184 (EMBL:X85213) (485 aa) fasta FT scores: E(): 1.1e-09, 23.29% id in 468 aa, and to FT Streptococcus pneumoniae low similarity to site-specific FT recombinase CcrB or SPR0942 SWALL:Q8DPY2 (EMBL:AE008466) FT (559 aa) fasta scores: E(): 4.3e-12, 25.48% id in 518 aa, FT and to Streptococcus pneumoniae site-specific recombinase, FT resolvase family SP1040 SWALL:Q97R01 (EMBL:AE007406) (559 FT aa) fasta scores: E(): 2e-11, 26.18% id in 485 aa" FT /db_xref="GOA:Q5LI09" FT /db_xref="InterPro:IPR006119" FT /db_xref="InterPro:IPR011109" FT /db_xref="UniProtKB/TrEMBL:Q5LI09" FT /protein_id="CAH06219.1" FT /translation="MENFELKGFAKGKKQQKEQVGGNAIIYTRVSSSEQVDGQSLEVQI FT DKCREYANMHSYNIVGEFGGTYESAKSDKERKEFSRMLAFIKQSNKKGSSQVIKTVIVF FT STSRFSRTGSTTIIEEVEARGAYVVSATSNYDPRTPVGKYMQLMELANARFQNDEKRAT FT TVENSVKALLKGRWIGKAPRGYDQKTTKKEQIITINEEGKLIRKAFLWKANNKLSNEEI FT RHRLAAEGFHICKQKLSELFKNPFYCGYMAHKFLQGDIVQGNHPPLIPKEIFLKVNGEL FT SKNHSGYEQKIDKEYAPLLGSIKCPCCGNNLSASISTKMRKKFGRTDIGYYVCSRKGCK FT YNSSTKNVHEAFEEEANKYVLSDKVSELLKLQLTITFENMNKENKERAQSIKSNIKAKE FT KELEQVETNYALCSDTKKQEICVKVMTRLEAEIRGLQVEYSKVNTEILNLDKFIDYAFA FT MRSNLFNLWELQGLEGRRRLQKLVFPDGFIYDKNNEHIEPKTVNQFFMLNYSFPTNNRD FT KKRETNSENHRSSLQVLEAGLEPAQPQWPKDFKSFVSTIPPFEHPFKESGKRDSNSRP" FT tRNA 538061..538144 FT /note="tRNA Leu anticodon TAA, Cove score 60.93" FT misc_feature complement(539211..539672) FT /note="Pfam match to entry PF00239 resolvase, Resolvase, N FT terminal domain, score -13.1, E-value 0.00022" FT CDS complement(join(539731..539889,539920..539982)) FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0441" FT /old_locus_tag="BF0459" FT /product="hypothetical protein (pseudogene)" FT /note="Pseudogene. Limited similarity to Bacillus anthracis FT str. Ames hypothetical protein BA4855 SWALL:AAP28543 FT (EMBL:AE017039) (99 aa) fasta scores: E(): 1.4, 31.66% id FT in 60 aa" FT CDS complement(join(539985..540206,540206..540997)) FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0442" FT /old_locus_tag="BF0461" FT /product="conserved hypothetical protein (pseudogene)" FT /note="Pseudogene. Similar to Bacteroides fragilis FT hypothetical 40.9 kDa protein SWALL:Q9XBH0 (EMBL:U75371) FT (365 aa) fasta scores: E(): 4.3e-26, 33.87% id in 307 aa. FT Note: This CDS contains a frameshift after residue 264" FT misc_feature complement(540078..540143) FT /note="Predicted helix-turn-helix motif with score FT 1793.000, SD 5.29 at aa 22-43, sequence FT KSYREIAKIIGKSDKTIKKWIE" FT misc_feature complement(540362..540385) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(540839..540862) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(541246..541536) FT /transl_table=11 FT /locus_tag="BF9343_0443" FT /old_locus_tag="BF0462" FT /product="putative regulatory protein" FT /note="Similar to Bacillus subtilis SinR protein or Sin or FT FlaD SWALL:SINR_BACSU (SWALL:P06533) (111 aa) fasta scores: FT E(): 0.00078, 33.78% id in 74 aa, and to Bacillus FT licheniformis SinR protein or Sin or FlaL SWALL:SINR_BACLI FT (SWALL:P22753) (111 aa) fasta scores: E(): 0.00091, 33.78% FT id in 74 aa" FT /db_xref="GOA:Q5LI08" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:Q5LI08" FT /protein_id="CAH06222.1" FT /translation="MGLRIKEVIKEKGMTVQTLADKMGINRVGLSNHINGNPSVAILEK FT IAIALEVSIQELFEKEPNKNINGYIEIGTEIFKITSFQDMKNIINRFNSTE" FT misc_feature complement(541366..541524) FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 45.3, E-value 1.2e-10" FT misc_feature complement(541432..541497) FT /note="Predicted helix-turn-helix motif with score FT 1554.000, SD 4.48 at aa 14-35, sequence FT MTVQTLADKMGINRVGLSNHIN" FT CDS 541708..542010 FT /transl_table=11 FT /locus_tag="BF9343_0444" FT /old_locus_tag="BF0463" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LI07" FT /protein_id="CAH06223.1" FT /translation="MRRYNKQQVMKDAHRLYGSEFHRKGRSWSECLRAAWGWEHDAVRA FT REEKAAKLDAMIAGSWIAHKEGVDQRRDERAWERGLTSDEISKAMGYGTGRYCGD" FT CDS 542119..542706 FT /transl_table=11 FT /locus_tag="BF9343_0445" FT /old_locus_tag="BF0465" FT /product="putative integrase/recombinase" FT /note="Similar to Bacteroides thetaiotaomicron integrase FT BT0947 SWALL:AAO76054 (EMBL:AE016929) (195 aa) fasta FT scores: E(): 1.1e-40, 56.92% id in 195 aa, and to FT Bacteroides thetaiotaomicron integrase BT2986 FT SWALL:AAO78092 (EMBL:AE016938) (195 aa) fasta scores: E(): FT 3.1e-38, 51.28% id in 195 aa, and to Bacteriophage Phi3626 FT putative recombinase SWALL:Q8SBK8 (EMBL:AY082070) (181 aa) FT fasta scores: E(): 4.8e-08, 30.53% id in 167 aa" FT /db_xref="GOA:Q5LI06" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:Q5LI06" FT /protein_id="CAH06224.1" FT /translation="MSLKNSYVTSDYIEWDTMLSLVRKLYRDKEYRFSLLIGCGSFFGL FT RISDILALTWSMLLNDEKFVIIEKKTGKRREIKINSNFQKHIADCYTVLGVTDKNEKCF FT ISRKKTVYSTQRINVLFKSIKNQYGLKVEHFSTHSMRKTFGRKVVEAAGENSEFALIKL FT SELFNHADVMTTRRYLGLRTEELLETYDMLSF" FT misc_feature 542155..542682 FT /note="Pfam match to entry PF00589 Phage_integrase, Phage FT integrase family, score 29.0, E-value 1.4e-06" FT misc_feature 542215..542283 FT /note="1 probable transmembrane helix predicted for BF0465 FT by TMHMM2.0 at aa 33-55" FT CDS 542992..544479 FT /transl_table=11 FT /locus_tag="BF9343_0446" FT /old_locus_tag="BF0466" FT /product="putative TonB-dependent receptor" FT /note="Similar to Bacteroides thetaiotaomicron TonB BT2059 FT SWALL:AAO77166 (EMBL:AE016934) (227 aa) fasta scores: E(): FT 1.4e-10, 41.93% id in 93 aa, and to Bacteroides FT thetaiotaomicron TonB BT0813 SWALL:AAO75920 (EMBL:AE016929) FT (443 aa) fasta scores: E(): 1.7e-09, 33.33% id in 150 aa, FT and to Bacteroides thetaiotaomicron TonB BT3673 FT SWALL:AAO78778 (EMBL:AE016941) (283 aa) fasta scores: E(): FT 1.3e-08, 38.71% id in 93 aa" FT /db_xref="GOA:Q5LI05" FT /db_xref="InterPro:IPR006260" FT /db_xref="UniProtKB/TrEMBL:Q5LI05" FT /protein_id="CAH06225.1" FT /translation="MAHTSFYKPKKHTDRAKGVYFNMMKHIVNLCFFFSLLSLNMYADN FT WDFVDMGVRADNGDILYWSTGDMVLLQNGEIKIADYGEFGSQFGWGDITGKVTGDNLND FT YGGVNSLKEISGNKDYDIVRAKLGKPYRLPTYTEIDRLFKNCSEEFVKIPRKLNSVDEN FT GVPLWLQGQWMWQHVIHTQKRTFGGWLSVKIDGLLVNVLSSEGKVLFEGLYSYSNGVLK FT FWDFTLYLDMDRKLIKDNRGEYFKKVSSQSNSMEICGYMLTSKINGNKLFFPVSHSYSA FT VNTGSGVLIMNNNQKLSYWTGTLYNDDFRYAASLMFASDGWGIGYQKRSSHFRIKAVKG FT GNGSVNSLQSISTKIKSNDNKVISSEINRKEGHLEQSVTEYSFSISYSFGGRQSVAKPQ FT YSGGESGLPRFFMKNVKYPTLAQESNIKGKVVVQFLVNEDGSLSNFKIVQSVHQSLDNE FT VLRVLMLLPEFIPASDEKGNPIKAYATISFTFETGYL" FT misc_feature 543052..543120 FT /note="1 probable transmembrane helix predicted for BF0466 FT by TMHMM2.0 at aa 21-43" FT misc_feature 544231..544335 FT /note="Pfam match to entry PF03544 TonB, Gram-negative FT bacterial tonB protein, score 40.0, E-value 4.4e-09" FT CDS complement(544604..545950) FT /transl_table=11 FT /locus_tag="BF9343_0447" FT /old_locus_tag="BF0467" FT /product="putative phage-derived protein" FT /note="Limited similarity to Amsacta moorei entomopoxvirus FT Amv209 SWALL:Q9EMJ7 (EMBL:AF250284) (463 aa) fasta scores: FT E(): 0.0013, 23.26% id in 361 aa, and to Bacteriophage P27 FT hypothetical 48.6 kDa protein SWALL:Q9MC01 (EMBL:AJ249351) FT (409 aa) fasta scores: E(): 0.0021, 34% id in 100 aa" FT /db_xref="InterPro:IPR018306" FT /db_xref="UniProtKB/TrEMBL:Q5LI04" FT /protein_id="CAH06226.1" FT /translation="MPSSFNVMEAFFSYQAELNTFLLLEEEDFLIDFVDFIDYVTSTDC FT PNLDESVKAFEDNTIYNFNVTNNPIDIDFALENKDIKYIIGGVSIIKRVNEISVIILAG FT EKNSDVNIPKITELMRFPSKQEIQPSPESKMEKIRFWENKEYWKTFILLRFNIETLELE FT AKYVQKDLGNAFDTTTDDLEAFMYRDNKFPSEQWEQIYNEIKEKTKNYVPLFEVGRLCI FT HLLSYIENYEENLILEEHTTILGTEPNKPKIFKRDKLVPPSYELRKRDVWCLKKQRENY FT ASQTITYNESFKLESDGFWKILKSNEIGEDKNGNTIHGKTWVSVLKTWHEVTNEPIKIT FT NNLKPLINSKNKGYIYIMRNASHDKDIFKVGLTRRETETRAKELYSTGVPDKYLVAEEF FT ETVDCVLAEKLIHQKLEKYRLNDKREFFKAQYSTIRKIVNEIVNEVNNS" FT misc_feature complement(544988..545011) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(546052..546210) FT /transl_table=11 FT /locus_tag="BF9343_0448" FT /old_locus_tag="BF0468" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LI03" FT /protein_id="CAH06227.1" FT /translation="MTRSDRMSFLNMIALPTKDNPRYDKILKSLDRHQTDEHRKDFSLR FT QKKLLLF" FT CDS complement(546241..546492) FT /transl_table=11 FT /locus_tag="BF9343_0449" FT /old_locus_tag="BF0469" FT /product="putative transmembrane protein" FT /note="no significant database matches" FT /db_xref="GOA:Q5LI02" FT /db_xref="UniProtKB/TrEMBL:Q5LI02" FT /protein_id="CAH06228.1" FT /translation="MNYIVWLQEIIFDSHRLIFKKIAYWIKVNINFTSIFHKQHKTLLI FT NNIHQITIFTYILCEYHIIILFSSCSSFDEESSKKNLY" FT misc_feature complement(546298..546366) FT /note="1 probable transmembrane helix predicted for BF0469 FT by TMHMM2.0 at aa 43-65" FT CDS 546522..547664 FT /transl_table=11 FT /locus_tag="BF9343_0450" FT /old_locus_tag="BF0470" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LI01" FT /protein_id="CAH06229.1" FT /translation="MILSQEEKEYFQLFNDMIVALYADNTVEPLKDICRQCIAKEAEIF FT SSMSKHLEKMRKRNNDIQNAQYLKNLVNGVISMLGNENIVLYDNIEELDVELRRQIKIS FT LATFKSLDNEFVKNKPIEAICQYIYENSFLKELDARLILGLKKLYSDVNAIGKDDKDVL FT IIFIKYFLYDMQHKVKYNYINMLIIENQEQPIIEDKANTLQSFLFYAQRTAGICYKKIV FT VNEAILLNDDAIVEIEKEASVGSSSSKDISNEKNKVGIEIDKEKILEKLCPSFNNREQV FT KKILEKVDERFEISSGECSKLDIATLCLILKEKCSLFNKNMRNFSDFKEYVCLYYGVVN FT PSYKKNDCIVSKGSSLSRFDELYNDNGAFWNLYLRKNNQF" FT CDS complement(547909..548805) FT /transl_table=11 FT /locus_tag="BF9343_0451" FT /old_locus_tag="BF0471" FT /product="conserved hypothetical protein" FT /note="Similar to N-terminus of Clostridium acetobutylicum FT CspA protein SWALL:Q45819 (EMBL:Z37723) (590 aa) fasta FT scores: E(): 0.29, 28.4% id in 176 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LI00" FT /protein_id="CAH06230.1" FT /translation="MNKVYGLNIDMLRLCYEIKEPYNINIIKTKEVGEEIDFMYFYLRR FT IQGKHFKFVYEIRYDDMGKDKLFGELRLGINDDEEASNIHTNGYNKAWISISNRVLYTD FT EIYYLDFIESNLGLELHNITTLDLCLDMSIDIARLIRRLIRNPQITTILNGKRIIDRKQ FT DRPEITYTSSGNMDKDKYLTVNIKQKKAIKDKSKGSTLIAYNKKTEIANSSDKRYIDDY FT YNNPSKLHRLEVHLNNEEIRDYITKNRHELSFYSLIDKKFLSRLFGYTLNSLIRFEKEE FT KPIDWANLLLEGYNNHP" FT CDS complement(548798..548989) FT /transl_table=11 FT /locus_tag="BF9343_0452" FT /old_locus_tag="BF0472" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHZ9" FT /protein_id="CAH06231.1" FT /translation="MDNNYKRQYRQLDDTTKQKISQSLKGRTKSATHTQAISNGLKKYW FT TNVPNQPNNNENKIEEHE" FT CDS complement(549250..550044) FT /transl_table=11 FT /locus_tag="BF9343_0453" FT /old_locus_tag="BF0473" FT /product="conserved hypothetical protein" FT /note="Similar to Borrelia burgdorferi hypothetical protein FT Bb0600 SWALL:O51546 (EMBL:AE001161) (518 aa) fasta scores: FT E(): 0.17, 27.85% id in 219 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHZ8" FT /protein_id="CAH06232.1" FT /translation="MEENSKRICLLCKIREANKRNSHILPKFFNDRLFSDGFMYEIDKN FT GQKRKIQKSPKEDYILCDQCENRIAIVETYCSNHFFHAFHNINSNIKFPLKNEIRGNNC FT SQLYKEGQYLNPNIFNLFIISLVWRTSISSHKWFSELDIDEKLKEQMRADLNDNLKYSR FT KEYDNQDCSHKEDNDYYSYEIISKQSTTKNPEGTLSIFNIKKHVIMLNLVDFSVFFFMN FT EKASEDFRPILNKKSSKIIKVCISDDKIWKNIHNEYKSRIIK" FT CDS 551180..553495 FT /transl_table=11 FT /locus_tag="BF9343_0454" FT /old_locus_tag="BF0474" FT /product="conserved hypothetical protein" FT /note="Similar to Clostridium perfringens hypothetical FT protein CPE1875 SWALL:Q8XJ86 (EMBL:AP003192) (1479 aa) FT fasta scores: E(): 5.2e-18, 22.98% id in 509 aa, and to FT Streptococcus pneumoniae hypothetical protein Sp1654 FT SWALL:Q97PG6 (EMBL:AE007459) (803 aa) fasta scores: E(): FT 9.6e-12, 23.26% id in 460 aa, and to Streptococcus FT pneumoniae conserved hypothetical protein spr1498 FT SWALL:Q8DNW5 (EMBL:AE008518) (803 aa) fasta scores: E(): FT 1.5e-11, 23.51% id in 455 aa" FT /db_xref="GOA:Q5LHZ7" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012341" FT /db_xref="UniProtKB/TrEMBL:Q5LHZ7" FT /protein_id="CAH06233.1" FT /translation="MKLKFLFLFLSYSLSIHSQNNLLYADSSKDSLFFEQKKALLTATW FT HKPFSYSSIQSNHTPLGPYMGNGDVGVVAFTSDNSQTLKISKVDFVTDGWTDWAGSGPA FT ALPIGGVNITVNSPVYSGFVTVNRADPSGFSYQMDQLNSELRMTTATAQQVKMVSWMGV FT NENMIITELTTSSKTPVPISVDTYADNQSASYTTTAQVNGQIAQVTRQTKTDAVRWISC FT AGISTKIVGVMSKPECLSESMVRSNFQLTASDTVLVVVYVSGGGKGNDPQLPTAYNKLL FT TLNKADVTQLKMAKKAWWKDMWTRSYVETNDELLNRHYLSSIYLLASAYNEHSPVSGGM FT YGVWNMDDKMMYHGDIHLNYNSQAGFYSAFSSNRPEIALPFYKTIELLIPEGRRRAKEE FT MGIMHPSWEGKSCRGILFPVGALGIGVFYNYYWQQTMNAPFNVPLFSWYYEYTGDLNFL FT RYRAYPYIRLCGDFYEDYMQKETYGKSYRYTITTGGHEDSWDLNPPSDLAFVKQTFGLL FT VRYSKLLGVDQKRRKKWNDILSHLPEYKVIMPTKTPNQGLPVYAKNEAGWDLPSHAIQL FT HAAYPCEILNLHSDSTALQIARNTLYYYEVSQKGFTNTMNELGLSAFVMGARIRFDPDL FT LLENMKTLIKTAGTNFLIIDGHHCTEKTAVIETVNSMMLQTVEGVIYLFPCWTQTPAAF FT TRLRAKGAFLVSADYDGTSVGGLKIFSEKGGICRLSNPWRGRKLRVTENGKPVSVKEQN FT NVCSFITRKGSTYTIVGL" FT misc_feature 551180..551233 FT /note="Signal peptide predicted for BF0474 by SignalP 2.0 FT HMM (Signal peptide probability 0.982) with cleavage site FT probability 0.888 between residues 18 and 19" FT CDS complement(553635..553835) FT /transl_table=11 FT /locus_tag="BF9343_0455" FT /old_locus_tag="BF0475" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3747 SWALL:AAO78852 (EMBL:AE016942) (66 aa) fasta FT scores: E(): 7.4e-19, 77.27% id in 66 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHZ6" FT /protein_id="CAH06234.1" FT /translation="MIVSRKISQIEVFAGSPWEVASVKSLLKAASIEVAMKDKGIGSIL FT LSVPCEYYTAAMRVIGGRTAS" FT CDS complement(553984..555639) FT /transl_table=11 FT /locus_tag="BF9343_0456" FT /old_locus_tag="BF0476" FT /product="putative Acyl-CoA synthetase" FT /note="Similar to Homo sapiens middle-chain Acyl-CoA FT synthetase1 MacS1 or MacS SWALL:Q96A20 (EMBL:AB062503) (577 FT aa) fasta scores: E(): 4.7e-70, 39.02% id in 533 aa, and to FT Bacteroides thetaiotaomicron acetyl-coenzyme A synthetase FT BT3755 SWALL:AAO78860 (EMBL:AE016942) (551 aa) fasta FT scores: E(): 1.6e-207, 88.92% id in 551 aa, and to FT Methanosarcina mazei putative acetyl-CoA synthetase MM3180 FT SWALL:Q8PSA2 (EMBL:AE013576) (560 aa) fasta scores: E(): FT 5.6e-141, 60.25% id in 556 aa" FT /db_xref="GOA:Q5LHZ5" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/TrEMBL:Q5LHZ5" FT /protein_id="CAH06235.1" FT /translation="MIDRFLSQTSFSSQEDFVKNLKIHVPDNFNFGYDIVDAWAAEQPD FT KPALLWTNDKGEHHQFSFADMKQYTDRTASYFQSLGIGHGDMVMLILKRRYEFWFSIIA FT LHKLGAVVIPATHLLTKKDIVYRCNAADIKMIVAAGEEVVTKHIIDAMPDSPTVKHLVS FT VGPEIPEGFDDFHQGIEHAAPFVKPEHPNTNDDISLMYFTSGTTGEPKMVAHDFTYPLG FT HIVTGSFWHNLKENSLHLTIADTGWGKAVWGKLYGQWIAGANVFVYDHEKFTPADILEK FT IQNYHVTSLCAPPTIFRFLIHEDLTKYDLSSLEYCTIAGEALNPAVFDTFKKLTGIKLM FT EGFGQTETTLTVATFPWMEPKPGSMGVPNPQYNVDLIDYEGRSVEAGEQGQIVIRTDKG FT KPLGLFKEYYRDASRTHEAWHDGIYYTGDVAWKDEDGYLWFVGRADDVIKSSGYRIGPF FT EVESALMTHPAVVECAITGVPDEIRGQVVKATIVLAKEYRERKGEDLVKELQNHVKKVT FT APYKYPRVIEFVDELPKTISGKIRRVEIRKNDEK" FT misc_feature complement(554215..555456) FT /note="Pfam match to entry PF00501 AMP-binding, AMP-binding FT enzyme, score 339.9, E-value 2.4e-99" FT misc_feature complement(555007..555042) FT /note="PS00455 Putative AMP-binding domain signature." FT CDS complement(555657..556211) FT /transl_table=11 FT /locus_tag="BF9343_0457" FT /old_locus_tag="BF0477" FT /product="putative regulatory protein" FT /note="Similar to Bacteroides thetaiotaomicron FT transcriptional regulator BT3756 SWALL:AAO78861 FT (EMBL:AE016942) (184 aa) fasta scores: E(): 8e-60, 86.95% FT id in 184 aa, and to Methanosarcina mazei transcriptional FT regulator MM3179 SWALL:Q8PSA3 (EMBL:AE013576) (186 aa) FT fasta scores: E(): 3.7e-29, 47.28% id in 184 aa, and to FT Methanobacterium thermoautotrophicum conserved protein FT MTH700 SWALL:O26796 (EMBL:AE000849) (182 aa) fasta scores: FT E(): 5.6e-29, 48.37% id in 184 aa" FT /db_xref="GOA:Q5LHZ4" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR013096" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q5LHZ4" FT /protein_id="CAH06236.1" FT /translation="MDDQIKQIAERLRGLRDVLELTAEDIARDCEISAEEYRLAETGDY FT DISVSMLQKIARKYGIALDALMFGEEPKMSSYFLTRAGKGTSIERTKAYKYQSLAAGFM FT NRNADPFIVTVEPKPDIEPIHYNSHSGQEFNLVLEGRMMISIDGKDLILNEGDSLYFNS FT KLPHGMKALDGKTVRFLAVIM" FT misc_feature complement(556014..556178) FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 27.6, E-value 2.5e-05" FT CDS complement(556271..557044) FT /transl_table=11 FT /locus_tag="BF9343_0458" FT /old_locus_tag="BF0478" FT /product="putative pyrroline-5-carboxylate reductase" FT /note="Similar to Clostridium sticklandii FT pyrroline-5-carboxylate reductase ProC SWALL:O87725 FT (EMBL:AJ010739) (266 aa) fasta scores: E(): 6.3e-22, 37.59% FT id in 258 aa, and to Bacteroides thetaiotaomicron FT pyrroline-5-carboxylate reductase BT3757 SWALL:AAO78862 FT (EMBL:AE016942) (257 aa) fasta scores: E(): 2.8e-73, 79.76% FT id in 257 aa, and to Bacteroides thetaiotaomicron FT pyrroline-5-carboxylate reductase BT1902 SWALL:AAO77009 FT (EMBL:AE016933) (266 aa) fasta scores: E(): 2.2e-46, 55.85% FT id in 256 aa" FT /db_xref="GOA:Q5LHZ3" FT /db_xref="InterPro:IPR000304" FT /db_xref="InterPro:IPR004455" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q5LHZ3" FT /protein_id="CAH06237.1" FT /translation="MKVAIIGAGNMGGSIACGLAKGKLIPASDIIVSNPSIGKLEALKK FT EFPSIAITRNNAEAATGADIVILAVKPWLIRGVLREMKLRSKQILVSVAAGISFEQLAH FT DVVEPEMPMFRIVPNTAISELQSMTLIASRNAGQELEALMVNLFSEMGMAMILPEDKLE FT AATALTSCGIAYVLKYIQAAMQAGIEMGIRPSDAMDMIAQSVKGAAELILNNDTHPSVE FT IDKVTTPGGITIKGINELEHNGFTSAIIKAMKASR" FT misc_feature complement(556301..557044) FT /note="Pfam match to entry PF01089 P5CR, Delta FT 1-pyrroline-5-carboxylate reductase, score 211.6, E-value FT 9.9e-61" FT CDS complement(557157..558281) FT /transl_table=11 FT /gene="argD" FT /locus_tag="BF9343_0459" FT /old_locus_tag="BF0479" FT /product="putative acetylornithine aminotransferase" FT /EC_number="2.6.1.11" FT /note="Similar to Bacillus subtilis acetylornithine FT aminotransferase ArgD SWALL:ARGD_BACSU (SWALL:P36839) (385 FT aa) fasta scores: E(): 2.6e-46, 40.47% id in 383 aa, and to FT Bacteroides thetaiotaomicron acetylornithine FT aminotransferase BT3758 SWALL:AAO78863 (EMBL:AE016942) (373 FT aa) fasta scores: E(): 3e-126, 87.13% id in 373 aa, and to FT Thermoanaerobacter tengcongensis acetylornithine FT aminotransferase ArgD or TTE2495 SWALL:ARGD_THETN FT (SWALL:Q8R7C1) (393 aa) fasta scores: E(): 1.3e-47, 41.23% FT id in 388 aa" FT /db_xref="GOA:Q5LHZ2" FT /db_xref="InterPro:IPR004636" FT /db_xref="InterPro:IPR005814" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q5LHZ2" FT /protein_id="CAH06238.1" FT /translation="MNLFDVYPLFDINIIKGKGCHVWDENGTEYLDLYGGHAVISIGHA FT HPHYVDMISKQVATLGFYSNSVINKLQQQVAERLGKISGYEDYSLFLINSGAEANENAL FT KLASFHNGRTKVISFGKAFHGRTSLAVEATDNPKIIAPINANGHITYLPLNDIEAAKTE FT LAKEDICAVIIEGIQGVGGIKIPTPEFLQELRKACTEHGTILILDEIQSGYGRSGKFFA FT HQYAGIKPDIITVAKGIGNGFPMAGVLISPMFTPVYGMLGTTFGGNHLACSAALAVMDV FT IEQENLVENAANIGSYLLEELKKFNEIKEVRGCGLMIGMEFDQPVKEIRSRLIHEQKVF FT TGASGTNVIRLLPPLCLSKEEADEFLARLRKVLG" FT misc_feature complement(557163..558281) FT /note="Pfam match to entry PF00202 aminotran_3, FT Aminotransferase class-III, score 409.8, E-value 2.2e-120" FT CDS complement(558291..559259) FT /transl_table=11 FT /gene="argC" FT /locus_tag="BF9343_0460" FT /old_locus_tag="BF0480" FT /product="putative acetylglutamyl phosphate reductase" FT /note="Similar to Bacillus amyloliquefaciens acetylglutamyl FT phosphate reductase ArgC SWALL:AAO72303 (EMBL:AY248750) FT (344 aa) fasta scores: E(): 4.2e-24, 36.47% id in 340 aa, FT and to Bacteroides thetaiotaomicron FT N-acetyl-gamma-glutamyl-phosphate reductase BT3759 FT SWALL:AAO78864 (EMBL:AE016942) (322 aa) fasta scores: E(): FT 8.1e-116, 93.78% id in 322 aa, and to Methanococcus FT jannaschii N-acetyl-gamma-glutamyl-phosphate reductase ArgC FT or mj1096 SWALL:ARGC_METJA (SWALL:Q58496) (341 aa) fasta FT scores: E(): 1.7e-26, 38.93% id in 339 aa" FT /db_xref="GOA:Q5LHZ1" FT /db_xref="HSSP:1VKN" FT /db_xref="InterPro:IPR000534" FT /db_xref="InterPro:IPR000706" FT /db_xref="InterPro:IPR012280" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR023013" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHZ1" FT /protein_id="CAH06239.1" FT /translation="MIKAGIIGGAGYTAGELIRLLINHPETEIVFINSTSNAGNKITDV FT HEGLYGECDLAFTDELPLEDIDVLFFCTAHGDTKKFMESHNIPEELKIIDLSMDYRIAS FT PDHDFIYGLPELNRRATCTAKHVANPGCFATCIQLGLLPLAKHLMLNEDVMVNAITGST FT GAGVKPGATSHFSWRNNNMSVYKAFEHQHVPEIKQSLKQLQNSFDAEIDFIPYRGDFPR FT GIFATLVVKTKVALEEIVRMYEEYYAKDSFVHIVDKNIDLKQVVNTNKCLIHLEKHGDK FT LLIISCIDNLLKGASGQAVHNMNLMFNLEETVGLRLKPSAF" FT misc_feature complement(558381..558851) FT /note="Pfam match to entry PF02774 Semialdhyde_dhC, FT Semialdehyde dehydrogenase, dimerisation domain, score FT 27.5, E-value 1.1e-07" FT misc_feature complement(558858..559259) FT /note="Pfam match to entry PF01118 Semialdhyde_dh, FT Semialdehyde dehydrogenase, NAD binding domain, score 39.5, FT E-value 3.1e-09" FT CDS complement(559256..560461) FT /transl_table=11 FT /gene="argG" FT /locus_tag="BF9343_0461" FT /old_locus_tag="BF0481" FT /product="putative argininosuccinate synthase" FT /EC_number="6.3.4.5" FT /note="Similar to Staphylococcus epidermidis FT argininosuccinate synthase ArgG or se0657 SWALL:Q8CPU3 FT (EMBL:AE016746) (401 aa) fasta scores: E(): 1.7e-28, 29.62% FT id in 395 aa, and to Bacteroides thetaiotaomicron FT argininosuccinate synthase BT3760 SWALL:AAO78865 FT (EMBL:AE016942) (402 aa) fasta scores: E(): 5.9e-144, 93.5% FT id in 400 aa, and to Methanococcus jannaschii FT argininosuccinate synthase ArgG or mj0429 SWALL:ASSY_METJA FT (SWALL:Q60174) (395 aa) fasta scores: E(): 7.7e-38, 33.24% FT id in 397 aa" FT /db_xref="GOA:Q5LHZ0" FT /db_xref="InterPro:IPR001518" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR018223" FT /db_xref="InterPro:IPR024074" FT /db_xref="UniProtKB/TrEMBL:Q5LHZ0" FT /protein_id="CAH06240.1" FT /translation="MEQKKKVVVAFSGGLDTSFTVMYLAKEKGYEVYAACANTGGFSEE FT QLKQNEENAYKLGAVKYVTLDVTQEYYEKSLKYMIFGNVLRNGTYPISVSSERIFQALA FT IARYAKEIGAEAIAHGSTGAGNDQIRFDMTFLVMTPGIEIITLTRDMALSRQEEIDYLN FT KNGFEADFTKLKYSYNVGLWGTSICGGEILDSAQGLPETAYLKQVTKEGSELLRLEFKN FT GELHAVNGEVFEDKIAAIQKVEEIGAAYGIGRDMHVGDTIIGIKGRVGFEAAAPMLIIG FT AHRFLEKYTLSKWQQYWKDQVANWYGMFLHESQYLEPVMRDIEAMLQESQRNVNGTAIL FT ELRPLSFSTVGVESQDDLVKTKFGEYGEMQKGWTAEDAKGFIKVTSTPLRVYYANHKDE FT EV" FT misc_feature complement(559277..560440) FT /note="Pfam match to entry PF00764 Arginosuc_synth, FT Arginosuccinate synthase, score 168.9, E-value 7.4e-48" FT misc_feature complement(560408..560434) FT /note="PS00564 Argininosuccinate synthase signature 1." FT CDS complement(560475..561053) FT /transl_table=11 FT /locus_tag="BF9343_0462" FT /old_locus_tag="BF0482" FT /product="putative acetyltransferase" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3761 SWALL:AAO78866 (EMBL:AE016942) (192 aa) FT fasta scores: E(): 4.3e-73, 95.83% id in 192 aa" FT /db_xref="GOA:Q5LHY9" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q5LHY9" FT /protein_id="CAH06241.1" FT /translation="MDTQQIDVMVADASHEVYVDTILETIRNAAKVRGTGIAERTHEYV FT ATKMKEGKAIIALCGDVFAGFTYIESWGNKQYVATSGLIVHPDFRGLGLAKRIKQASFQ FT LARLRWPRAKIFSLTSGAAVMKMNTELGYVPVTFNELTDDEAFWKGCEGCINHEILMAK FT DRKFCICTAMLYDPTDPHNIKKEQERNNI" FT misc_feature complement(560733..560891) FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 16.6, E-value FT 1.1e-05" FT CDS complement(561087..561560) FT /transl_table=11 FT /gene="argR" FT /locus_tag="BF9343_0463" FT /old_locus_tag="BF0483" FT /product="putative arginine repressor" FT /note="Similar to Bacillus subtilis arginine repressor ArgR FT or AhrC SWALL:ARGR_BACSU (SWALL:P17893) (149 aa) fasta FT scores: E(): 1.7e-13, 36.3% id in 146 aa, and to FT Bacteroides thetaiotaomicron arginine repressor, FT transcriptional regulator of arginine metabolism BT3762 FT SWALL:Q8A1A4 (EMBL:AE016942) (157 aa) fasta scores: E(): FT 7.1e-46, 87.17% id in 156 aa, and to Staphylococcus FT epidermidis arginine repressor se1201 SWALL:Q8CP40 FT (EMBL:AE016748) (153 aa) fasta scores: E(): 1.3e-13, 39.7% FT id in 136 aa" FT /db_xref="GOA:Q5LHY8" FT /db_xref="HSSP:1B4A" FT /db_xref="InterPro:IPR001669" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR020899" FT /db_xref="InterPro:IPR020900" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHY8" FT /protein_id="CAH06242.1" FT /translation="MKKKANRLDAIKMIISSKEVGSQEELLQELGQEGFELTQATLSRD FT LKQLKVAKAASMNGRYVYVLPNDIMYKRVGDQSASEMLMNNGFISLQFSGNIAVIKTRP FT GYASSMAYDIDNRESDTILGTIAGDDTIMLVLREGATPTAVRHFLSLIIPNIN" FT misc_feature complement(561108..561314) FT /note="Pfam match to entry PF02863 Arg_repressor_C, FT Arginine repressor, C-terminal domain, score 56.1, E-value FT 6.7e-14" FT misc_feature complement(561348..561521) FT /note="Pfam match to entry PF01316 Arg_repressor, Arginine FT repressor, DNA binding domain, score 48.9, E-value 9.5e-12" FT tRNA complement(561887..561959) FT /note="tRNA Pro anticodon CGG, Cove score 74.71" FT tRNA complement(561972..562044) FT /note="tRNA Phe anticodon GAA, Cove score 82.07" FT CDS 562485..563720 FT /transl_table=11 FT /locus_tag="BF9343_0464" FT /old_locus_tag="BF0486" FT /product="putative two-component histidine sensor kinase" FT /note="Similar to Bacteroides thetaiotaomicron FT two-component system sensor histidine kinase BT2574 FT SWALL:AAO77681 (EMBL:AE016936) (419 aa) fasta scores: E(): FT 1e-91, 56.72% id in 409 aa, and to Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase BT2540 SWALL:AAO77647 (EMBL:AE016936) (391 aa) fasta FT scores: E(): 2.6e-60, 45.04% id in 373 aa, and to FT Bacteroides thetaiotaomicron two-component system sensor FT histidine kinase BT1833 SWALL:AAO76940 (EMBL:AE016933) (882 FT aa) fasta scores: E(): 1.7e-44, 47.27% id in 294 aa" FT /db_xref="GOA:Q5LHY7" FT /db_xref="InterPro:IPR001610" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:Q5LHY7" FT /protein_id="CAH06243.1" FT /translation="MMIYIIFRVFIIIILFICARYWYLWRKISVQKNEWVAQTKESDTI FT LRSMNACFILINSDLVVIRTNYYDLSGISEEPESSGRVGDLLNCKNAVRSGGGCGAHKN FT CENCMIRHTIENAFCHKKGFHKLEASMRLLSSDHQQIIPCDVSVSGTYLNNEGHEQMLL FT TVYDITELKNMQRLLNIEKENAVSAEKLKSAFIANMSHEIRTPLNAIVGFSGLLASADD FT DTEKKMYLDIVAENNDRLLQIVTDVLDLSKIESGSLDFHYSEFDVNDLLCALHGILNIR FT LKDKPEIKLICKAGTDEWIIYSEQHRIVQIITNLVHNAMKFTHSGEICFGCRPQGEDEI FT YFYVSDTGIGIPAGEQDKIFDRFTKLDHEVPGTGLGLTLSQTIVQNLGGEMGVESEVTK FT GSTFWFTLPLKS" FT misc_feature 562497..562556 FT /note="1 probable transmembrane helix predicted for BF0486 FT by TMHMM2.0 at aa 5-24" FT misc_feature 563055..563252 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 90.3, E-value 3.3e-24" FT misc_feature 563391..563714 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 124.2, FT E-value 2.1e-34" FT CDS complement(563813..565411) FT /transl_table=11 FT /locus_tag="BF9343_0465" FT /old_locus_tag="BF0487" FT /product="putative glutamate:gamma-aminobutyrate FT antiporter" FT /note="Similar to Listeria monocytogenes FT glutamate:gamma-aminobutyrate antiporter GadC SWALL:Q9EYX0 FT (EMBL:AF309077) (507 aa) fasta scores: E(): 3e-45, 33.47% FT id in 475 aa, and to Bacteroides thetaiotaomicron FT glutamate/gamma-aminobutyrate antiporter BT2573 FT SWALL:AAO77680 (EMBL:AE016936) (570 aa) fasta scores: E(): FT 4.1e-167, 84.58% id in 558 aa, and to Brucella melitensis FT glutamate/gamma-aminobutyrate antiporter Bmeii0909 FT SWALL:Q8YBJ1 (EMBL:AE009724) (510 aa) fasta scores: E(): FT 2.8e-101, 56.59% id in 493 aa" FT /db_xref="GOA:Q5LHY6" FT /db_xref="InterPro:IPR002293" FT /db_xref="InterPro:IPR004841" FT /db_xref="InterPro:IPR022520" FT /db_xref="UniProtKB/TrEMBL:Q5LHY6" FT /protein_id="CAH06244.1" FT /translation="MANIKQAVKLGVFTLAIMNVTAVVSLRGLPAEAVYGMSSAFYYLF FT AAIVFLIPTSLVAAELAAMFQDKQGGVFRWVGEAYGKKLGFLAIWVQWIESTIWYPTVL FT TFGAVSIAFIGMNDTHDMTLASNKYYTLAVVLIIYWLATFISLKGMGWVGKVAKIGGMV FT GTIIPAALLIILGIVYLASGGHSNLDFHSSFFPDLTNFDNVVLAASIFLFYAGMEMGGI FT HVKDMQNPSKNYPKAVFIGALITVIIFVLGTFSLGIIIPAKDISLTQSLLVGFDNYFRY FT IHASWLSPIIAIALAFGVLAGVLTWVAGPSKGIFAVGKAGYMPPFFQKTNKLGVQKNIL FT FVQGGAVTVLSLLFVVMPSVQSFYQILSQLTVILYLVMYLLMFSGAIYLRYNMKKANRP FT FRIGKKGNGLMWIVGGLGFLGSLLAFILSFIPPSQISTGSNTVWFSVLIIGALVVVIAP FT FIIYAAKKPSWADPNSTFEPFHWETQAKPQVAPATTTTAGPATSSATTIGSTTSAPSTG FT SGSVSSDKDTPQKQS" FT misc_feature complement(564011..565333) FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score -211.0, E-value 0.00014" FT misc_feature complement(order(564023..564091,564119..564187, FT 564248..564316,564329..564397,564488..564556, FT 564635..564703,564740..564802,564869..564937, FT 564956..565024,565067..565162,565223..565291, FT 565334..565393)) FT /note="12 probable transmembrane helices predicted for FT BF0487 by TMHMM2.0 at aa 7-26, 41-63, 84-115, 130-152, FT 159-181, 204-224, 237-259, 286-308, 339-361, 366-388, FT 409-431 and 441-463" FT misc_feature complement(565238..565411) FT /note="Signal peptide predicted for BF0487 by SignalP 2.0 FT HMM (Signal peptide probability 0.653) with cleavage site FT probability 0.342 between residues 58 and 59" FT CDS 565628..566365 FT /transl_table=11 FT /locus_tag="BF9343_0466" FT /old_locus_tag="BF0488" FT /product="putative ion transport protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT potassium channel subunit BT2572 SWALL:AAO77679 FT (EMBL:AE016936) (243 aa) fasta scores: E(): 5.4e-78, 81.81% FT id in 242 aa, and to Enterococcus faecalis ion transporter, FT putative ef2854 SWALL:AAO82546 (EMBL:AE016955) (242 aa) FT fasta scores: E(): 2.1e-08, 28.12% id in 224 aa, and to FT Shewanella oneidensis ion transporter so3768 SWALL:Q8EAX3 FT (EMBL:AE015810) (274 aa) fasta scores: E(): 1.4e-07, 21.99% FT id in 241 aa" FT /db_xref="InterPro:IPR013099" FT /db_xref="UniProtKB/TrEMBL:Q5LHY5" FT /protein_id="CAH06245.1" FT /translation="MKMALSDFALRKKGIYGILHVIILLLSLFLVISISIDTFKGIPFY FT TQSVYMKVQLWICVLFLFDFILELFLSKNKWHYLSTHFIFLLVAIPYQNIISYMGWTFS FT PEVTYMIRFVPLVRGGYAMAIVVGWLTYNKASGLFVSYLTMLLATVYFSSLAFFVLEHK FT VNPLVTGYGDALWWAFMDVTTVGSNIIAVTVTGRVLSVLLAALGMMMFPIFTVYVTSLI FT QKKNKEKEEYYKQLEAADESKPK" FT misc_feature order(565664..565732,565775..565843,565862..565930, FT 565958..566026,566039..566107,566150..566209, FT 566228..566296) FT /note="7 probable transmembrane helices predicted for FT BF0488 by TMHMM2.0 at aa 13-35, 50-72, 79-101, 111-133, FT 138-160, 175-194 and 201-223" FT CDS complement(566457..567458) FT /transl_table=11 FT /locus_tag="BF9343_0467" FT /old_locus_tag="BF0489" FT /product="putative malate dehydrogenase" FT /note="Similar to Thermoplasma acidophilum malate FT dehydrogenase Mdh or ta0952 SWALL:MDH_THEAC (SWALL:Q9HJL5) FT (325 aa) fasta scores: E(): 1.6e-17, 28.7% id in 331 aa, FT and to Bacteroides thetaiotaomicron malate dehydrogenase FT BT2510 SWALL:AAO77617 (EMBL:AE016936) (333 aa) fasta FT scores: E(): 1.6e-110, 85.58% id in 333 aa, and to FT Thermoplasma volcanium malate dehydrogenase tv1121 or FT tvg1151701 SWALL:Q979N9 (EMBL:AP000995) (325 aa) fasta FT scores: E(): 1e-17, 29.65% id in 317 aa" FT /db_xref="GOA:Q5LHY4" FT /db_xref="InterPro:IPR001236" FT /db_xref="InterPro:IPR001557" FT /db_xref="InterPro:IPR010945" FT /db_xref="InterPro:IPR015955" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR022383" FT /db_xref="UniProtKB/TrEMBL:Q5LHY4" FT /protein_id="CAH06246.1" FT /translation="MEFLTNEKLTIVGAAGMIGSNMAQTALMMKLTPNICLYDPYAPAL FT EGVAEELYHCAFEGVNLTYTSDIKEALSGAKYIVSSGGAARKAGMTREDLLKGNAEIAA FT QFGKDIRQYCPDVKHVVVVFNPADITGLIVLLYAGLKPSQVSTLAALDSTRLQNELVKY FT LHIPASEIVNCRTYGGHGEQMAVFASTTKVQGEALTKIIDTPRMPMQDWEDLKIRVIQG FT GKHIIDLRGRSSFQSPAYLSIEMIAAAMGGQPFRWPAGTYVSDKKFDHILMAMETSITK FT EGVSYKEIQGTPEEQKEMEESYAHLCKLRDEVIAMGILPEINKWHELNKHIN" FT misc_feature complement(566508..567014) FT /note="Pfam match to entry PF02866 ldh_C, lactate/malate FT dehydrogenase, alpha/beta C-terminal domain, score -2.4, FT E-value 3.6e-06" FT misc_feature complement(567021..567449) FT /note="Pfam match to entry PF00056 ldh, lactate/malate FT dehydrogenase, NAD binding domain, score 90.6, E-value FT 2.7e-24" FT misc_feature complement(567390..567458) FT /note="Signal peptide predicted for BF0489 by SignalP 2.0 FT HMM (Signal peptide probability 0.862) with cleavage site FT probability 0.707 between residues 23 and 24" FT CDS 567670..568518 FT /transl_table=11 FT /locus_tag="BF9343_0468" FT /old_locus_tag="BF0491" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2505 SWALL:AAO77612 (EMBL:AE016936) FT (279 aa) fasta scores: E(): 2.7e-89, 83.33% id in 276 aa, FT and to Pseudomonas aeruginosa hypothetical protein Pa1116 FT SWALL:Q9I4L9 (EMBL:AE004542) (279 aa) fasta scores: E(): FT 5e-49, 50.36% id in 276 aa, and to Shewanella oneidensis FT conserved hypothetical protein so1868 SWALL:Q8EFU7 FT (EMBL:AE015630) (279 aa) fasta scores: E(): 8.8e-49, 47.08% FT id in 274 aa" FT /db_xref="InterPro:IPR014464" FT /db_xref="InterPro:IPR022967" FT /db_xref="UniProtKB/TrEMBL:Q5LHY3" FT /protein_id="CAH06247.1" FT /translation="MKIMSIELGKFNQLEVVKQVDFGMYLDGGEEGEILLPTRYVPEDC FT KLGDWLNVFLYLDNEERLIATTLTPLVQVGEFACLEVSWVNQFGAFLNWGLMKDLFVPF FT SEQKMKMQVGNKYVIHAHIDDESFRIVASAKVDRYLSKEKASYQPGEEVNILIWQKTDL FT GFKAIIENMYSGLLYDSEIFQTLHTGDVLKAYVKQVREDGKIDLILQKPGFEKIDDFSK FT TLHRYITEHGGWIGLTDKSPAEEIYDTFGVSKKTFKKAVGDLYKKRLILLHEDGIELVR FT P" FT CDS 568621..569274 FT /transl_table=11 FT /locus_tag="BF9343_0469" FT /old_locus_tag="BF0492" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2504 SWALL:AAO77611 (EMBL:AE016936) (226 aa) FT fasta scores: E(): 4e-17, 44.1% id in 229 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT2503 FT SWALL:AAO77610 (EMBL:AE016936) (338 aa) fasta scores: E(): FT 2.3e-11, 36.36% id in 110 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHY2" FT /protein_id="CAH06248.1" FT /translation="MRKVIITLCFLFVAFVAQAGRISGINIQSSGEAILVFVDGEQICT FT PTETCFIANYSGRHRIEVYAVRYIPRTGQSVKGDLLFQEWVSNPGMNIRNIRVGYNDRP FT DFCPDRPVRPGYDVVMNRTEFDRFLRTVKDKHFDSDRNKLIETTLVSTGFTSDQCLQLV FT NLFSFDSEKIKLMQAMYPRIVDKPNFYLVIESLTFQSDKNKMNEFVRKYHNQRN" FT misc_feature 568621..568677 FT /note="Signal peptide predicted for BF0492 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.978 between residues 19 and 20" FT CDS 569289..569957 FT /transl_table=11 FT /locus_tag="BF9343_0470" FT /old_locus_tag="BF0493" FT /product="conserved hypothetical protein" FT /note="Similar to C-terminus of Bacteroides FT thetaiotaomicron hypothetical protein BT2504 SWALL:AAO77611 FT (EMBL:AE016936) (226 aa) fasta scores: E(): 2.7e-11, 40% id FT in 95 aa, and to entire protein of Bacteroides FT thetaiotaomicron hypothetical protein BT2503 SWALL:AAO77610 FT (EMBL:AE016936) (338 aa) fasta scores: E(): 9.7e-09, 35.52% FT id in 228 aa" FT /db_xref="GOA:Q5LHY1" FT /db_xref="InterPro:IPR007450" FT /db_xref="UniProtKB/TrEMBL:Q5LHY1" FT /protein_id="CAH06249.1" FT /translation="MKKIHVSAILILLVVMSSCAGLIINFKNSQLMSIQKGMTQQEVKT FT ILGKPNYRRFDGAMEEWEYRGYLSKAGHSVICVNFIDNRVVGLDSFRDGAPTAPPAPSF FT SLGIGGTVTASDIAPACDYRAMRNDEFARFLNDVKSKTFDSDRTDFIEKATRSTGFTSE FT QCCRLIKLYSFDDDRTKVLKILYPSVVDKDNFSAAIDGLDFLSNQDTVKNFVRNYNRIK FT " FT misc_feature 569289..569348 FT /note="Signal peptide predicted for BF0493 by SignalP 2.0 FT HMM (Signal peptide probability 0.993) with cleavage site FT probability 0.511 between residues 20 and 21" FT misc_feature 569298..569366 FT /note="1 probable transmembrane helix predicted for BF0493 FT by TMHMM2.0 at aa 4-26" FT misc_feature 569313..569345 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 569967..570830 FT /transl_table=11 FT /locus_tag="BF9343_0471" FT /old_locus_tag="BF0494" FT /product="conserved hypothetical protein" FT /note="Similar to N-terminus of Bacteroides FT thetaiotaomicron conserved hypothetical protein BT2502 FT SWALL:AAO77609 (EMBL:AE016936) (399 aa) fasta scores: E(): FT 7.2e-55, 52.75% id in 309 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHY0" FT /protein_id="CAH06250.1" FT /translation="MKRILIFFLVIGITAISSVSMAAMSNSRIRKETRFLTDKMAYELN FT LSTGQYNDVYEINYDFIYSIRYLMDDVIRGEEWALDKYYRTLDIRNDDLRWVLTASQYR FT RFIGVDYFYRPVYASGGSWSFRIYIRYTNHNHFYFGKPYHYNSYCGGHYRTHYHNSYYR FT GRYRHDFYSGSHSIRDHRNYNTHRRSDFGSVTIRSNSGRRDEVRRGVSQRESSSSRDNN FT RVTPGNATRTGRETRSTENNRRTNTVRKSENISTPHRVTPERTDSKRSNSRSTSSRSAE FT RGNRER" FT misc_feature 569967..570032 FT /note="Signal peptide predicted for BF0494 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.967 between residues 22 and 23" FT misc_feature 569979..570038 FT /note="1 probable transmembrane helix predicted for BF0494 FT by TMHMM2.0 at aa 5-24" FT CDS complement(570950..572872) FT /transl_table=11 FT /locus_tag="BF9343_0472" FT /old_locus_tag="BF0495" FT /product="putative bioynthetic peptidoglycan FT transglycosylase" FT /note="C-terminus is similar to the N-terminus of FT Acinetobacter calcoaceticus monofunctional biosynthetic FT peptidoglycan transglycosylase MtgA SWALL:MTGA_ACICA FT (SWALL:O24849) (224 aa) fasta scores: E(): 1.2e-17, 38.65% FT id in 163 aa, and to entire protein of Bacteroides FT thetaiotaomicron penicillin-binding protein BT2501 FT SWALL:AAO77608 (EMBL:AE016936) (649 aa) fasta scores: E(): FT 3.3e-173, 67.14% id in 633 aa" FT /db_xref="GOA:Q5LHX9" FT /db_xref="InterPro:IPR001264" FT /db_xref="UniProtKB/TrEMBL:Q5LHX9" FT /protein_id="CAH06251.1" FT /translation="MGKYRTKGSIALIITGSVLILVLAGLYLRRNGILCRTADKRILYA FT EQKYGLSICYEDLRMKGLNEIELKNLSIVPRNRDTLLTLHTLNMHLNFWKLIRGKIEVR FT NVTVDQLKASFIKADSMANYDFLFLKRKRETSSGQVQTDYAHRINRILNLFYGFLPENG FT TLCQIDITERKDRNFVNIHIPKLTVRQNHFRSDIEVHEDSTTQHWTTCGKVNRSSHTLK FT AELYAQQNNKIILPYLKRRFDADIRLDTLTYSLTKSEKNGGQVQLTGQAAVSGLEVYHK FT ALSPETVNLDRGQVSYRILVGKESAELDSTTVVQFNQMQFHPYLKAEKKKQQWHFTAAV FT DKPWFPADQLFGSLPKGLFSNLEGIKTSGELAYHFFLDANFALLDSLKLESELKERNFC FT IVNYGVTDLGKMSEEFIYTAYENGQPVRTFPIGPSWEHFTPLDSISPLLQMSVMQSEDG FT AFYFHRGFLPEAMREALIQDLKVKRFARGGSTITMQLVKNVFLNRNKNIARKLEEALIV FT WLIETERLTSKERMYEVYLNIVEWGPLVYGVQEAATYYFKKRPSQLTAEESIFLASIIP FT KPKHFRNSFNNDMQLKESLEGYYRLITERLVKKGIISEVAADSIRPEINVTGEAKKDLQ FT RDSIQ" FT misc_feature complement(571115..571627) FT /note="Pfam match to entry PF00912 Transglycosyl, FT Transglycosylase, score 130.4, E-value 2.8e-36" FT misc_feature complement(572789..572848) FT /note="1 probable transmembrane helix predicted for BF0495 FT by TMHMM2.0 at aa 9-28" FT misc_feature complement(572801..572872) FT /note="Signal peptide predicted for BF0495 by SignalP 2.0 FT HMM (Signal peptide probability 0.790) with cleavage site FT probability 0.732 between residues 24 and 25" FT CDS 572997..574286 FT /transl_table=11 FT /locus_tag="BF9343_0473" FT /old_locus_tag="BF0496" FT /product="putative mismatch repair-like protein" FT /note="C-terminal domain V of MutS is similar to C-terminal FT domain V of MutS Staphylococcus aureus MutS protein FT SWALL:Q932P9 (EMBL:AJ296342) (872 aa) fasta scores: E(): FT 1.5e-14, 30.04% id in 233 aa, and to C-terminal domain V of FT MutS from Clostridium acetobutylicum mismatch repair FT protein MutS-like ATPase CAC3563 SWALL:Q97DB6 FT (EMBL:AE007853) (577 aa) fasta scores: E(): 1e-16, 26.88% FT id in 305 aa, and to C-terminal domain V of MutS from FT Clostridium perfringens MutS-related protein CPE2156 FT SWALL:Q8XIG4 (EMBL:AP003193) (595 aa) fasta scores: E(): FT 1e-16, 24.51% id in 310 aa" FT /db_xref="GOA:Q5LHX8" FT /db_xref="InterPro:IPR000432" FT /db_xref="InterPro:IPR007696" FT /db_xref="UniProtKB/TrEMBL:Q5LHX8" FT /protein_id="CAH06252.1" FT /translation="MRTDRQTLNDLGIVESTYGEKTLFSLFDMTESDGGKRCLEEWLVH FT PLSDWKALHERQEAIRYPDFPEIRICREELDFIEFYLSQGDRPTRVSYLESAFSYIFRH FT FRATPERYVIRRGTKLLENVLLELKTFADHVTELSPRLIRNIAATISEIYQATELGKMV FT DSCGQEDSFYRTDRLDYIFRYRRNHTIAALLSIVYQLDAIRTMHRTAVTKGWCFPSFTN FT DSKFMLCNFYHPQVKDAVANDWEMENGNICIFTGSNMAGKSTTLKAIASAVWLAHAGFP FT VPASSMVCPMFDGIFTSINLPDSLRDGRSHFYAEVLRVKEVLEQINKGHHCFVLFDELF FT RGTNARDAFEASVAVAEVLKAKAYSRFLISTHIIELARKLDGDDACCFYYLESAIVDDE FT LICNHKVKPGISESRVGYWIVKKELAGFEK" FT misc_feature 572997..573176 FT /note="Pfam match to entry PF05192 MutS_III, MutS domain FT III, score 27.8, E-value 1.6e-07" FT misc_feature 573639..574277 FT /note="Pfam match to entry PF00488 MutS_V, MutS domain V, FT score -21.9, E-value 1e-13" FT misc_feature 573762..573785 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 574365..574925 FT /transl_table=11 FT /locus_tag="BF9343_0474" FT /old_locus_tag="BF0497" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHX7" FT /protein_id="CAH06253.1" FT /translation="MRIKLLFLISILFCTGSYAQETVTEPDFIGEVLVLNPDNSTTPLE FT KATVKIKTKANASVYLVGMGKVKTKINVDGPSAQVRLHQGDDFKLIVRAVDNNTDPMSI FT INIFQFETGKKVRKAELSSLSTFGGASSNNLELLPYTAKKYGESSYLITLKEKPVGEYG FT ITVRNPNSLDEKNIIVASFGIDQ" FT misc_feature 574365..574421 FT /note="Signal peptide predicted for BF0497 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.997 between residues 19 and 20" FT CDS complement(575099..577267) FT /transl_table=11 FT /locus_tag="BF9343_0475" FT /old_locus_tag="BF0498" FT /product="putative melibiase" FT /note="Similar to Bacillus stearothermophilus FT alpha-galactosidase AgaB SWALL:Q934H7 (EMBL:AY013287) (729 FT aa) fasta scores: E(): 1.9e-81, 38.21% id in 594 aa, and to FT Bacteroides thetaiotaomicron alpha-galactosidase BT2851 FT SWALL:AAO77957 (EMBL:AE016937) (721 aa) fasta scores: E(): FT 4.5e-142, 48.75% id in 724 aa, and to Bacteroides FT thetaiotaomicron alpha-galactosidase BT3131 SWALL:AAO78237 FT (EMBL:AE016939) (718 aa) fasta scores: E(): 1e-136, 46.28% FT id in 726 aa" FT /db_xref="GOA:Q5LHX6" FT /db_xref="InterPro:IPR000111" FT /db_xref="InterPro:IPR002252" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LHX6" FT /protein_id="CAH06254.1" FT /translation="MLKRTFILIGLVLSFCSLPAQELIQITTRNTALVFRVANQSLRQV FT YYGPRLADTDVLQKQGNNFPAYSTYGMGEQNEVALHAVHADGNTSTLLNFENVKQESPE FT PGITLTTISLKDPLYPFQVKLFYKAYEESDLIEQWTIYQHTEKKPVTLYQFASAQLSFK FT SSSYRLTHFAGDWAGECNMSEVELTEGIKVIDSKLGTRATFFAHPMCLLSLNGRMTEDN FT GEVIGMALAWPANFKLEFEKNNNQELRVLAGMNPYASHYKLKKGDVFQTPSFLYTYSTK FT GNGQVSRNFHRWARKYGLRHGENSRYTLMNNWEATYFNFNEPKLKSIIEDAAGMGFELF FT LLDDGWFGQKHPRNNDDAGLGDWVVNKEKLPNGLGWLVKQCTDNDIKFGIWVEPEMVNP FT QSELFEKHPDWVIQQPEREHILFRRQLVLDLSNPEVQEFVYKSVHDILKDNPQIAFVKW FT DCNRAVTNPGSTYLPADEQSHIWIEYGRGLLNVFKKVRDSHPDVHFMLCSGGGGRLDYG FT SLRYFEEYWPSDNTDALQRILIQWGNSQFFPSIAMCCHVSASPNHQTGRTTPLKFRFDV FT AMQGALGMDLQPSTMNEKEVIFAKEAIKTYESIRNIVFTGDLYRILSPYEGNRTSMMYV FT LPDKSRAVFYAYQLKSHIGEVSAPMRFKGLIPDKKYNVKELNIYPGSRAATGSANGQSF FT SGDFLMNQGLPIGLSGDYSSAVIELEQQ" FT misc_feature complement(575264..576466) FT /note="Pfam match to entry PF02065 Melibiase, Melibiase, FT score 518.3, E-value 4.7e-153" FT misc_feature complement(577202..577267) FT /note="Signal peptide predicted for BF0498 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.646 between residues 22 and 23" FT CDS complement(577381..579618) FT /transl_table=11 FT /locus_tag="BF9343_0476" FT /old_locus_tag="BF0499" FT /product="putative glycosyl hydrolase, alpha-xylosidase" FT /note="Similar to Sulfolobus solfataricus alpha-xylosidase FT XylS or SSO3022 SWALL:XYLS_SULSO (SWALL:Q9P999) (731 aa) FT fasta scores: E(): 5.6e-33, 24.48% id in 531 aa, and to FT Streptococcus mutans putative alpha-glucosidase, glycosyl FT hydrolase SMU.104 SWALL:Q8DWF5 (EMBL:AE014862) (731 aa) FT fasta scores: E(): 3.1e-75, 32.29% id in 675 aa, and to FT Bifidobacterium longum probable pentosidase or hexosidase FT bl1334 SWALL:Q8G4P4 (EMBL:AE014762) (880 aa) fasta scores: FT E(): 3.7e-75, 32.48% id in 711 aa" FT /db_xref="GOA:Q5LHX5" FT /db_xref="InterPro:IPR000322" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LHX5" FT /protein_id="CAH06255.1" FT /translation="MRNIQRTILWIAGLLFCLPSSSSNPVVIGNSRFTFITDHLVRMEY FT AQQGKFLNDSTLFAVDRTPRCTEVKVERKEGNRYIMTTPAMRVEYYNDGFPFGQTNLFV FT YFRNGDSPKEKRWYIASRQSRNLLGAVTTLDDVEGPIDRQEGLLSRDGWYLINDTGKEV FT LKNGWVATRDRNHVQDLYLFVYGNDYKAALKSLQTVSGPSPMTRKYVHGSWYCRWWNYT FT DEDYRQLVREYREHDFPLDIMVFDMGWHTQNAKVGTGHAGTRGWTGYSWNRKLIPEPEK FT LIKDFKDDHIYVVLNEHPHDGIRPHEDSYQAFVRDLGVDTQQTGVPLFDAGNRDYMNAF FT MKHAHQESDSMGVAFWWLDWQQDYLYPLVRGTNMKHLPWMNHIYYNYSSGNHLRGAGFS FT RWAGWGDHRHPIQFSGDAVGNWNLLRFEVDLTTTSGNAGCFFWAHDLGGFYDGTDPELY FT TRWTQFGLLNSSLRIHSVYDEKLDRRPWLWGVEAEKAMHRIYHLRSQLMPYIYSSVRQC FT HTDMLPLNRGMYIEYPDEEKAYQYPGQFLFGDLLLGAPITAKGEGEKKIATQEVWLPGG FT TDWYNFFTGERQEGGQVIKTKSPLEQFPLFIKGGCPLPMQPYTERMCSTPLTELIVRCY FT PGKEGANNTYILYEDDGLTQDYLQGKYATTRLNYQKSGGQTIITVSPVEGTYEGQPRKR FT AYRIELPGIPVQARVSVNGKKARTTPNQELNGVIVPIKVMDIHKPVVIKIQ" FT misc_feature complement(577486..579504) FT /note="Pfam match to entry PF01055 Glyco_hydro_31, Glycosyl FT hydrolases family 31, score -165.3, E-value 2.8e-11" FT misc_feature complement(579532..579600) FT /note="1 probable transmembrane helix predicted for BF0499 FT by TMHMM2.0 at aa 7-29" FT misc_feature complement(579553..579618) FT /note="Signal peptide predicted for BF0499 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.791 between residues 22 and 23" FT CDS complement(579726..581441) FT /transl_table=11 FT /locus_tag="BF9343_0477" FT /old_locus_tag="BF0500" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2365 SWALL:AAO77472 (EMBL:AE016935) (497 aa) FT fasta scores: E(): 7.2e-16, 27.07% id in 591 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT1553 FT SWALL:AAO76660 (EMBL:AE016932) (442 aa) fasta scores: E(): FT 4e-13, 28.27% id in 382 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT2269 SWALL:AAO77376 FT (EMBL:AE016935) (469 aa) fasta scores: E(): 1.9e-11, 27.42% FT id in 350 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LHX4" FT /protein_id="CAH06256.1" FT /translation="MKIKHIVSCFFVSLIGLSACSIEELPYNQLTEDELDGSYESLLSA FT TRGNYAVFKQTAFHQGWHYAGELASDNVSLSGVSSDALMYIYNYQRITDNYHMSNMWGW FT AYRSIINSNKILEKAQEGESKEMDQLIGENYFLRGWLEFVLVNVFGRPYNQSPETNLGI FT PLKLTADINDYPMRSTVKESYEQILKDLKKAETLLNSESNIYAGPSAAKALLSRVYLYM FT GNNKLAAEYATEVIESSGRTLLEGEAYATANVLVPEDNPEIIFAIRCTKDKDDYGWNSI FT GGFYANIDGVGWGELYASEPLRDAYAEYPEDLRSRYIVPQYLKDDETGEYRKEFIYIES FT SEEDGVPRKYYRWNEIIEENGNYRIKDAYLSKYEYKDTLTMKQDAGGYYVESRLKSGKD FT NPTPGTYEKHYVTIQNLMAKRNDYPKYYVYKCSKQENQPQLWSPTVLRLGEMYLNRAEA FT YAKEPALGDALADLNVIRTRAHIPALSAGDMKPGKTMLEYVLEERRKELAFEGHRRFDI FT FRNGLTMNRTYPGTHDRGAATSVRLTISADDPAAIEFIPQREIDSYPGVLEQNP" FT misc_feature complement(579960..579983) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(581379..581441) FT /note="Signal peptide predicted for BF0500 by SignalP 2.0 FT HMM (Signal peptide probability 0.952) with cleavage site FT probability 0.712 between residues 21 and 22" FT misc_feature complement(581382..581414) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(581458..584628) FT /transl_table=11 FT /locus_tag="BF9343_0478" FT /old_locus_tag="BF0501" FT /product="putative outer membrane protein" FT /note="Similar to Porphyromonas gingivalis receptor antigen FT RagA SWALL:Q9ZA60 (EMBL:AJ130872) (1017 aa) fasta scores: FT E(): 9.7e-38, 29.79% id in 1027 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT3090 SWALL:AAO78196 FT (EMBL:AE016938) (999 aa) fasta scores: E(): 6.2e-54, 30.46% FT id in 1011 aa, and to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2364 SWALL:AAO77471 (EMBL:AE016935) (1025 aa) FT fasta scores: E(): 2.2e-53, 30.56% id in 1024 aa" FT /db_xref="GOA:Q5LHX3" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR011662" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LHX3" FT /protein_id="CAH06257.1" FT /translation="MKMIVLFLFVFISGVFAGNANSQETKVSISKNNKPIREILGEIER FT QTDYLFVYSEKEVDVNQRKTVNVSQQRVADVLSSLFRSTNVGYAMEGHNIMLMAKTTQT FT DAAQQKRHITGVVKDIKGETIIGANIMIKGTGTGVSTNIDGEFSIEAAAGEELIVSFIG FT YLTQTIKIDSQKTLNIKLLEDTKTLEEVVVVGYTVQTKSAVTGSVAVVKADKLKDVNTL FT EVGSMLQGKVSGVYVSGSSGEPGQASKIRIRGKGTLNSSVSPLWVVDGVIVGEDPGLNP FT NEIDNISVLKDGSATALYGSRAANGVIVVTTKRGEYDANKYSVSVNAGVSLLSTGRLEM FT MNSQELYDYQKSWNNQSWFTEELLKHNTDWFKEASKPGLYTNANITYTGSSGRMRSFVM FT ADYYREEGAIKDFTLDRFTFRSNNDVKFTDRFTMSTKISGSLSRTDSQQRSVYNTYLYL FT PWDFPYNEDGSIRSGQEQDWRGRDGINDMYDLQWNWSRSKKLTVDGTINFNYQITDWLR FT FESNNYIRYISNRSESYTDKRSRSGQSDKGSLSNSNSLLTKQFTNQMIRFEKSFGKHKV FT NALGAYEYTRHFYESTSAEGRGIQPGREILDVTTGIKSIGGYKDAIATQSALFNANYDY FT DNRYMGQVSYRMDESSCFGKNNRMGHFFTVSGGWNIQNETFFESLRESVNQLKVRVSYG FT SLGNTPGAYYGHYPLYSSMMYNDEVAYFPSQMGNADLSWEKCYTTNIGIDARFFDRFGV FT TIDLYNKNTSDLLYYAPLPNISGYTGQYKNVGAINNKGLEISLNADVIRTSKFQWTSDF FT NIGFNRNRVTELYGGKPELKGLKRLEEGRDMDEWYLREWAGVDPANGSPLWYTTDENGK FT RTTTDSYNKADRVYCGSAAPKFTGGWMNSFSYKGFTLTANFDFVYGNLLYNQSRELLDS FT DGAYADYNSMKLKSGWKRWEKEGDIATHPKAINGGNKNSNKSSSRYLEKGNYFSLRNLS FT LGYSIPEKLCGKLGLQRVNVSCSADNLFTLTPFSGVSPQLSDSSTDGYAGTIYPLSRRI FT VFGLNVSF" FT misc_feature complement(581461..584025) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -6.8, E-value 0.00026" FT misc_feature complement(584563..584628) FT /note="Signal peptide predicted for BF0501 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.917 between residues 45 and 46" FT misc_feature complement(584569..584628) FT /note="1 probable transmembrane helix predicted for BF0501 FT by TMHMM2.0 at aa 21-43" FT CDS complement(584837..585766) FT /transl_table=11 FT /locus_tag="BF9343_0479" FT /old_locus_tag="BF0502" FT /product="putative anti-sigma factor" FT /note="Similar to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrF SWALL:Q8VTB0 FT (EMBL:AF329100) (336 aa) fasta scores: E(): 1.9e-15, 26.08% FT id in 299 aa, and to Bacteroides thetaiotaomicron putative FT anti-sigma factor BT2462 SWALL:AAO77569 (EMBL:AE016936) FT (311 aa) fasta scores: E(): 8.8e-48, 43.04% id in 309 aa, FT and to Bacteroides thetaiotaomicron putative anti-sigma FT factor BT2561 SWALL:AAO77668 (EMBL:AE016936) (312 aa) fasta FT scores: E(): 8.5e-37, 38.01% id in 313 aa" FT /db_xref="InterPro:IPR006860" FT /db_xref="InterPro:IPR012373" FT /db_xref="UniProtKB/TrEMBL:Q5LHX2" FT /protein_id="CAH06258.1" FT /translation="MNQEILNRYLTGDASAEEKQMVVRWLDADPQHMREYLALRKLHDI FT TLWQEKPAATVDKKKWLTLPYIREFIKIAAIFLIAVTSVYFLAPERGRDTPDLKAIHVP FT SGQRAELTLGDGTRVCLNSNTTLTFPDHFDRKERRVTLDGEGYFQVAKNEKKPFIVQAK FT EYEVRVLGTEFNVMMYKDQDFFETVLLKGSVEVNETTTGRKVKLQPNERLFGKAGQLRK FT ESINEWNRALWMQGILYFDNTRMDEIIRQLGLYYDVKFILEKESLANVRFTGKFRIRDG FT VEHVLKVLQLKCKFTYQRDEDSNTITIN" FT misc_feature complement(585239..585451) FT /note="Pfam match to entry PF04773 FecR, FecR protein, FT score 38.0, E-value 6.9e-11" FT misc_feature complement(585503..585571) FT /note="1 probable transmembrane helix predicted for BF0502 FT by TMHMM2.0 at aa 66-88" FT CDS complement(585860..586420) FT /transl_table=11 FT /locus_tag="BF9343_0480" FT /old_locus_tag="BF0503" FT /product="putative ECF-type RNA polymerase sigma factor" FT /note="Similar to previously sequenced Bacteroides fragilis FT fragilis regulatory region sigma factor RpoE SWALL:Q8VTB1 FT (EMBL:AF329100) (187 aa) fasta scores: E(): 1.6e-08, 31.28% FT id in 179 aa, and to Bacteroides thetaiotaomicron RNA FT polymerase ECF-type sigma factor BT2463 SWALL:AAO77570 FT (EMBL:AE016936) (189 aa) fasta scores: E(): 1.6e-36, 58.98% FT id in 178 aa, and to Bacteroides thetaiotaomicron RNA FT polymerase ECF-type sigma factor BT3748 SWALL:AAO78853 FT (EMBL:AE016942) (180 aa) fasta scores: E(): 1.3e-28, 50.85% FT id in 175 aa" FT /db_xref="GOA:Q5LHX1" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="InterPro:IPR014327" FT /db_xref="UniProtKB/TrEMBL:Q5LHX1" FT /protein_id="CAH06259.1" FT /translation="MDDLNINSFNALYTLYYRKSFLFAKSYVHDEQVAEDIAAEALIKL FT WEKLKTDIINSPQAMLLTILKNKSLDYLRLEQNKLNAMSELSELYVRELDIRVSSLEAC FT DPSEIFSEEVNQIIQATLRTLPEQTRRVFKMSRFENKMNKEIAENLGITVKGVEYHISR FT ALKEFRISLKDYLPLFYFFFYFH" FT misc_feature complement(586184..586387) FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 33.7, E-value 3.6e-07" FT CDS complement(586459..586620) FT /transl_table=11 FT /locus_tag="BF9343_0481" FT /old_locus_tag="BF0504" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHX0" FT /protein_id="CAH06260.1" FT /translation="MFDNEHLTYICGHYKKEQIKHTIADTIPGKEAKQKYSQLLILFCF FT FFHTLRHF" FT CDS complement(586672..586821) FT /transl_table=11 FT /locus_tag="BF9343_0482" FT /old_locus_tag="BF0505" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHW9" FT /protein_id="CAH06261.1" FT /translation="MVLPLFFITFQAIQKIKGEIPIPPFTNQNYNLRMSYTTTGQLTPS FT LLYK" FT CDS complement(586866..588197) FT /transl_table=11 FT /locus_tag="BF9343_0483" FT /old_locus_tag="BF0506" FT /product="putative outer membrane transport/efflux protein" FT /note="Similar to Proteus mirabilis metalloprotease FT transporter component ZapD SWALL:O85377 (EMBL:AF064762) FT (449 aa) fasta scores: E(): 3.6e-12, 24.57% id in 407 aa, FT and to Bacteroides thetaiotaomicron putative outer membrane FT efflux protein BT2498 SWALL:AAO77605 (EMBL:AE016936) (445 FT aa) fasta scores: E(): 1.7e-115, 73.07% id in 442 aa, and FT to Porphyromonas gingivalis immunoreactive 51kd antigen FT PG52 SWALL:Q9S3R4 (EMBL:AF175719) (455 aa) fasta scores: FT E(): 2.2e-42, 31.85% id in 452 aa" FT /db_xref="GOA:Q5LHW8" FT /db_xref="InterPro:IPR003423" FT /db_xref="UniProtKB/TrEMBL:Q5LHW8" FT /protein_id="CAH06262.1" FT /translation="MHNMRNKILINLLILTGLSAYTAQAQEGWTLRRCIDYAIEHNINV FT QQTANSAEQSKVEVNTAKWARLPNLSGSASQNWSWGRTASPVDNTYNDINSGSSSFSLG FT TNIPLFTGLELPNQYALTKLNLKAAIEDLNKAKEDLAINVTSAYLQVLFNQELSKVAQS FT QVGLSKEQLNRITRLHEVGKASPAEVAEAKARVAQDEMSAVQADNNYRLALLDLSQLLE FT LPTPENFSLATPDTELEFSPLTSPDEIYNQAMLYKPGIKAAEYRLEGSEKNVRIAKSSY FT YPQLSFSAGLGTNFYTVNGNAGSNFGNQMKNNLNKYAGFSLNIPLFNRLATRNRVRTAR FT LQQTNLALQLDNTKKVLYKEIQQAWYNAIAAESKFKSSESAVEASQESFRLMSEKFDNG FT KATSVEYNESKLNLTKALSDRIQAKYDYLFRTKILDFYKGQPIE" FT misc_feature complement(586875..587462) FT /note="Pfam match to entry PF02321 OEP, Outer membrane FT efflux protein, score 93.6, E-value 3.3e-25" FT misc_feature complement(587499..588107) FT /note="Pfam match to entry PF02321 OEP, Outer membrane FT efflux protein, score 111.3, E-value 1.6e-30" FT misc_feature complement(588123..588197) FT /note="Signal peptide predicted for BF0506 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.845 between residues 25 and 26" FT CDS complement(588237..589337) FT /transl_table=11 FT /locus_tag="BF9343_0484" FT /old_locus_tag="BF0507" FT /product="putative transport/efflux component protein" FT /note="Similar to Yersinia pestis probable FT macrolide-specific efflux protein MacA precursor or YPO1364 FT or Y2814 SWALL:MACA_YERPE (SWALL:P58411) (371 aa) fasta FT scores: E(): 1.5e-11, 21.88% id in 361 aa, and to FT Bacteroides thetaiotaomicron membrane fusion efflux protein FT BT2497 SWALL:AAO77604 (EMBL:AE016936) (366 aa) fasta FT scores: E(): 1.9e-100, 81.96% id in 366 aa, and to FT Chlorobium tepidum membrane fusion efflux protein, putative FT CT1348 SWALL:Q8KCR5 (EMBL:AE012893) (422 aa) fasta scores: FT E(): 1e-15, 25.38% id in 394 aa" FT /db_xref="GOA:Q5LHW7" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q5LHW7" FT /protein_id="CAH06263.1" FT /translation="MKKYLKITLLVVVVAIFIGTFIFLYQKSKPKTTVYETVTPEIADL FT EKTTVATGKVEPRDEVLIKPQISGIISEVYKEAGQTIKQGEVIAKVKVIPELGQLNSAE FT SRVRVAEISTAQAETDHERIKKLYNDKLISREDYEKSEVEIKKAREELQTAKDALEIIK FT EGITKNSASFSSTLIRSTIDGLILDVPIKVGNSVIMSNTFNDGTTIATVANMNDLIFKG FT KIDETEVGRIHEGMPVKLTIGALQNLTFDAELEYISPKGVEENGANQFEIKAAVHAPDS FT VQIRSGYSANAEIVLQRAQKVLAVPEGIIEFSGDSTFVWVMTDSIPEQKFERRQIKTGM FT SDGIKLEIKEGLTGKEKVRASEKKDK" FT misc_feature complement(589263..589319) FT /note="1 probable transmembrane helix predicted for BF0507 FT by TMHMM2.0 at aa 7-25" FT misc_feature complement(589266..589337) FT /note="Signal peptide predicted for BF0507 by SignalP 2.0 FT HMM (Signal peptide probability 0.860) with cleavage site FT probability 0.372 between residues 24 and 25" FT CDS complement(589446..590696) FT /transl_table=11 FT /locus_tag="BF9343_0485" FT /old_locus_tag="BF0509" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="Similar to Bacteroides thetaiotaomicron putative ABC FT transporter, ATP-binding protein BT2496 SWALL:AAO77603 FT (EMBL:AE016936) (413 aa) fasta scores: E(): 1.4e-136, FT 82.16% id in 415 aa, and to Bacteroides thetaiotaomicron FT ABC transporter, putative permease BT2495 SWALL:AAO77602 FT (EMBL:AE016936) (419 aa) fasta scores: E(): 3.5e-43, 34.83% FT id in 422 aa, and to Agrobacterium tumefaciens hypothetical FT protein atu1817 atu1817 or agr_c_3336 SWALL:Q8UEE3 FT (EMBL:AE009136) (420 aa) fasta scores: E(): 1.8e-29, 28.85% FT id in 409 aa" FT /db_xref="GOA:Q5LHW6" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:Q5LHW6" FT /protein_id="CAH06264.1" FT /translation="MIMRVDMDTCEEILVTITRNKTRSLLTAFGVFWGIFMLVALMGGG FT QGMQEMMQAEFEGFATNSGFMASQKTGEAYKGFRKGRYWDIENADIERIRKKVKDIDVI FT TPSIARWGSTAIYGEKKYDCSVKGLYPDYAKIENQDMAYGRFINDVDVREGRKVCVIGK FT RVYESLFNPGEDPCGKYVRVDGIYYQVIGMCVSEGNMNIQGRASEAVVLPFSTMQQAYN FT MGKRIDVICYTVKPGKKVSDLEPEIEAILKEAHYISPDDKQAVMKLNAEAMFSMMDNLF FT TGIHVLIWMVGLGTLLAGAIGVSNIMMVTVKERTTEIGIRRAIGARPKDILQQILSESM FT VLTTIAGMAGISFGVLILQLMEIGVNSGKDHYSHFQVSFGMAIGTCLLLVTLGLLAGLA FT PAYRAMAIRPIEAIRDE" FT misc_feature complement(589470..589859) FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 115.8, E-value 7.1e-32" FT misc_feature complement(order(589503..589571,589614..589682, FT 589779..589847,590556..590624)) FT /note="4 probable transmembrane helices predicted for FT BF0509 by TMHMM2.0 at aa 25-47, 284-306, 339-361 and FT 376-398" FT CDS complement(590693..591952) FT /transl_table=11 FT /locus_tag="BF9343_0486" FT /old_locus_tag="BF0510" FT /product="putative ABC transporter" FT /note="Similar to Bacteroides thetaiotaomicron ABC FT transporter, putative permease BT2495 SWALL:AAO77602 FT (EMBL:AE016936) (419 aa) fasta scores: E(): 9.1e-130, FT 79.23% id in 419 aa, and to Bacteroides thetaiotaomicron FT putative ABC transporter, ATP-binding protein BT2496 FT SWALL:AAO77603 (EMBL:AE016936) (413 aa) fasta scores: E(): FT 4.5e-43, 37.58% id in 423 aa, and to Anabaena sp. FT hypothetical protein Alr0446 SWALL:Q8YZL1 (EMBL:AP003582) FT (423 aa) fasta scores: E(): 3.5e-20, 29.38% id in 422 aa" FT /db_xref="GOA:Q5LHW5" FT /db_xref="InterPro:IPR003838" FT /db_xref="UniProtKB/TrEMBL:Q5LHW5" FT /protein_id="CAH06265.1" FT /translation="MIDIWQEIYGTIKRNKLRTLLTGFAVAWGIFMLIVLLGAGNGLIH FT AFEKSSSARALNSIKIYPGWTGKPYDGLKEGRRIQLDNKDLDATMEHFSDNIISVGASQ FT WQSNVNLSYGQEYVNLSLEGVYPNFTEVESVKSTDGRFINDIDLKERRKVIVLHTKTAE FT ILFGKSKTEPIGKFVNAGGVSYQVVGLYTDPGDQGSSEAYIPFSTLQVIYNKGDKLNNL FT TFTTKGLTTIETNEAFEAAYRKVMGAKHRFDPSDNSALWIWNRFTNYLQSQNAMGILRT FT AIWVIGIFTLLSGIVGVSNIMLITVKERTREFGIRKALGAKPFSILWLIIVESVTITTL FT FGYIGMVAGIAATEWMNKVAGEQTVDVGMFSETVFLNPTVDISIAIQATLTLVVAGTLA FT GFFPAKKAVSIRPIEALRAD" FT misc_feature complement(590717..591130) FT /note="Pfam match to entry PF02687 FtsX, Predicted FT permease, score 95.6, E-value 8.2e-26" FT misc_feature complement(order(590741..590809,590912..590980, FT 591041..591109,591827..591895)) FT /note="4 probable transmembrane helices predicted for FT BF0510 by TMHMM2.0 at aa 20-42, 282-304, 325-347 and FT 382-404" FT misc_feature complement(591446..591469) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(591967..592683) FT /transl_table=11 FT /locus_tag="BF9343_0487" FT /old_locus_tag="BF0511" FT /product="putative ABC transporter ATP-binding protein" FT /note="Similar to Staphylococcus epidermidis ABC FT transporter ATP-binding protein se2406 SWALL:Q8CQM3 FT (EMBL:AE016752) (228 aa) fasta scores: E(): 6.2e-35, 49.34% FT id in 229 aa, and to Bacteroides thetaiotaomicron ABC FT transporter, ATP-binding protein BT2494 SWALL:AAO77601 FT (EMBL:AE016936) (238 aa) fasta scores: E(): 1.5e-77, 93.27% FT id in 238 aa, and to Streptococcus pneumoniae ABC FT transporter, ATP-binding protein sp0786 SWALL:Q97RL8 FT (EMBL:AE007385) (233 aa) fasta scores: E(): 3e-39, 54.04% FT id in 235 aa" FT /db_xref="GOA:Q5LHW4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q5LHW4" FT /protein_id="CAH06266.1" FT /translation="MIHLKDINKTYNNGAPLHVLKGINLDIERGEFVSIMGASGSGKST FT LLNILGILDNYDDGEYYLNNVLIKDLSETKSAEYRNRMIGFIFQSFNLISFKNAVENVA FT LPLFYQGVSRKKRNALAMEYLDKLGLKDWAHHMPNEMSGGQKQRVAIARALITQPQIIL FT ADEPTGALDSKTSVEVMQILKDLHKTGMTIVVVTHESGVANQTDKIIHIKDGIIERIEE FT NLNHDASPFGKDGYMK" FT misc_feature complement(592039..592596) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 185.6, E-value 6.7e-53" FT misc_feature complement(592219..592263) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(592552..592575) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 592862..593842 FT /transl_table=11 FT /locus_tag="BF9343_0488" FT /old_locus_tag="BF0512" FT /product="putative ROK family transcriptional repressor" FT /note="Similar to Prevotella bryantii glucomannokinase Gmk FT SWALL:Q9AGU1 (EMBL:AF326962) (182 aa) fasta scores: E(): FT 2.2e-39, 67.58% id in 182 aa, and to Bacteroides FT thetaiotaomicron ROK family transcriptional repressor, with FT glucokinase domain BT2493 SWALL:AAO77600 (EMBL:AE016936) FT (326 aa) fasta scores: E(): 5.3e-108, 91.71% id in 326 aa, FT and to Clostridium acetobutylicum transcriptional FT regulators of NagC/XylR family CAC2613 SWALL:Q97FW3 FT (EMBL:AE007758) (313 aa) fasta scores: E(): 9.9e-33, 35.96% FT id in 317 aa" FT /db_xref="InterPro:IPR000600" FT /db_xref="UniProtKB/TrEMBL:Q5LHW3" FT /protein_id="CAH06267.1" FT /translation="MNSSMEKPYVVGIDIGGTNTVFGIVDARGTIIASGAVKTQVYPTV FT EEYADEVCKNLLPLIIANGGVDKIKGIGIGAPNGNYYTGTIEFAPNLPWKGVLPLASMF FT EERLGIPTALTNDANAAAVGEMTYGAARGMKDFIMITLGTGVGSGIVINGQVVYGHDGF FT AGELGHVIVRRDGRICGCGRKGCLETYCSATGVARTAREFLAARTDASLLRNIPAESIV FT SKDVYDAAVQGDKLAQEIFEFTGNILGEALADAIAFSSPEAIILFGGLAKSGDYIMKPI FT MKAMENNLLNIYKGKAKLLVSELKDSDAAVLGASALAWELKDLRD" FT misc_feature 592895..593449 FT /note="Pfam match to entry PF00480 ROK, ROK family, score FT 151.2, E-value 1.6e-42" FT misc_feature 593285..593368 FT /note="PS01125 ROK family signature." FT CDS complement(594597..594950) FT /transl_table=11 FT /locus_tag="BF9343_0489" FT /old_locus_tag="BF0513" FT /product="putative 50S ribosomal protein" FT /note="Similar to Staphylococcus epidermidis 50S ribosomal FT protein L19 se0916 SWALL:Q8CSU9 (EMBL:AE016747) (116 aa) FT fasta scores: E(): 5.1e-19, 59.79% id in 97 aa, and to FT Bacteroides thetaiotaomicron 50S ribosomal protein L19 FT BT2489 SWALL:AAO77596 (EMBL:AE016936) (117 aa) fasta FT scores: E(): 2e-41, 99.13% id in 116 aa, and to FT Fusobacterium nucleatum 50S ribosomal protein L19 RplS or FT FN0430 SWALL:RL19_FUSNN (SWALL:Q8RG80) (116 aa) fasta FT scores: E(): 1.8e-21, 60% id in 110 aa" FT /db_xref="GOA:Q5LHW2" FT /db_xref="InterPro:IPR001857" FT /db_xref="InterPro:IPR008991" FT /db_xref="InterPro:IPR018257" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHW2" FT /protein_id="CAH06268.1" FT /translation="MDLIKIAEEAFATGKQHPSFKAGDTVTVAYRIIEGNKERVQLYRG FT VVIKIAGHGEKKRFTVRKMSGTVGVERIFPIESPAIDSIEVNKVGKVRRAKLYYLRALT FT GKKARIKEKRVNG" FT misc_feature complement(594609..594950) FT /note="Pfam match to entry PF01245 Ribosomal_L19, Ribosomal FT protein L19, score 162.1, E-value 8.2e-46" FT misc_feature complement(594648..594695) FT /note="PS01015 Ribosomal protein L19 signature." FT CDS 595107..595895 FT /transl_table=11 FT /locus_tag="BF9343_0490" FT /old_locus_tag="BF0514" FT /product="putative 5'nucleotidase/UDP-sugar hydrolase" FT /note="Similar to Enterobacter aerogenes UDP-sugar FT hydrolase UshA SWALL:Q9RQT7 (EMBL:AF068226) (550 aa) fasta FT scores: E(): 2e-07, 28% id in 175 aa, and to Bacteroides FT thetaiotaomicron putative 5'-nucleotidase/2',3'-cyclic FT phosphodiesterase BT2441 SWALL:AAO77548 (EMBL:AE016936) FT (278 aa) fasta scores: E(): 1.7e-64, 68.19% id in 261 aa, FT and to Escherichia coli O6 hypothetical protein c4898 FT SWALL:Q8FBB1 (EMBL:AE016770) (519 aa) fasta scores: E(): FT 5e-13, 30.23% id in 258 aa" FT /db_xref="GOA:Q5LHW1" FT /db_xref="InterPro:IPR006179" FT /db_xref="InterPro:IPR008334" FT /db_xref="UniProtKB/TrEMBL:Q5LHW1" FT /protein_id="CAH06269.1" FT /translation="MKQNYAKIISGFILAGLLTFSSCQSTHEMAKTDYQIAKVEGRMID FT IDAKWDTHPDADAVAILKPYKEKIDNMMYEVIGSSEQKMDKGHPESLLSNLVAEVLRQA FT ATKVQDKPADMGLVNMGGLRNILPAGDITVGTVYEILPFENSLCVMKMKGTHLKALLTS FT IASLKGEGVSGIRMEITKDGKLLNATVGGQPIDDNKLYTVATIDYLADGNGSMEAFLQA FT DDRVCPEGATLRGLFLDYVRQQTAAGKKITSALDGRITVK" FT misc_feature 595107..595196 FT /note="Signal peptide predicted for BF0514 by SignalP 2.0 FT HMM (Signal peptide probability 0.995) with cleavage site FT probability 0.704 between residues 30 and 31" FT misc_feature 595143..595175 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 595332..595769 FT /note="Pfam match to entry PF02872 5_nucleotidaseC, FT 5'-nucleotidase, C-terminal domain, score 96.8, E-value FT 3.6e-26" FT misc_feature 595488..595517 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT CDS 595935..596807 FT /transl_table=11 FT /locus_tag="BF9343_0491" FT /old_locus_tag="BF0515" FT /product="possible secreted 5'-nucleotidase" FT /note="N-terminus is similar to Trichinella spiralis FT secreted 5'-nucleotidase SWALL:Q8MQS9 (EMBL:AY127571) (550 FT aa) fasta scores: E(): 1e-24, 34.61% id in 286 aa, and to FT entire protein of Bacteroides thetaiotaomicron FT 5'-nucleotidase precursor BT2440 SWALL:AAO77547 FT (EMBL:AE016936) (295 aa) fasta scores: E(): 4.1e-78, 72.01% FT id in 268 aa" FT /db_xref="GOA:Q5LHW0" FT /db_xref="InterPro:IPR004843" FT /db_xref="InterPro:IPR006146" FT /db_xref="InterPro:IPR006179" FT /db_xref="UniProtKB/TrEMBL:Q5LHW0" FT /protein_id="CAH06270.1" FT /translation="MIFPINKKHTFFSKEKTLLTFFFILFISFSAFGQQDKKLILLQTS FT DVHSRLEPINQEGDRNYDKGGFVRRATFVKEFRKEHPDMLLFDCGDISQGTPYYNMFQG FT EVEVKMMNEMKYDAMTIGNHEFDFDLDNMARLFRMADFPVVCANYDVSATVLKDLVKPY FT VVFERDGVKIGVLGLGCQLEGMVQANKCVGVVYNDPVTVANEVAAVLKEKEGCDVVVCL FT SHLGVQYDENQLIPKTRNIDVVLGGHSHTFMKGPKTLLNMDGKNVSLMHTGKSGIYVGQ FT MDLTLEKKK" FT misc_feature 595935..596033 FT /note="Signal peptide predicted for BF0515 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.999 between residues 33 and 34" FT misc_feature 595983..596036 FT /note="1 probable transmembrane helix predicted for BF0515 FT by TMHMM2.0 at aa 17-34" FT misc_feature 596049..596690 FT /note="Pfam match to entry PF00149 Metallophos, FT Calcineurin-like phosphoesterase, score 62.1, E-value FT 1e-15" FT misc_feature 596280..596315 FT /note="PS00786 5'-nucleotidase signature 2." FT CDS 596875..599865 FT /transl_table=11 FT /locus_tag="BF9343_0492" FT /old_locus_tag="BF0516" FT /product="possible FT beta-N-acetylglucosaminidase/beta-lactamase fusion protein" FT /note="N-terminus is similar to Streptomyces FT thermoviolaceus beta-N-acetylglucosaminidase precursor nagA FT SWALL:O82840 (EMBL:AB008771) (632 aa) fasta scores: E(): FT 7.6e-37, 35.02% id in 454 aa, and entire protein is similar FT to Bacteroides thetaiotaomicron FT beta-N-acetylglucosaminidase BT2439 SWALL:AAO77546 FT (EMBL:AE016936) (1001 aa) fasta scores: E(): 9.4e-201, FT 52.42% id in 971 aa, and C-terminus is similar to FT Chlorobium tepidum D-alanyl-d-alanine carboxypeptidease, FT putative CT0324 SWALL:Q8KFK2 (EMBL:AE012811) (380 aa) fasta FT scores: E(): 8.7e-20, 30.32% id in 432 aa. CDS specifies FT possible fusion protein" FT /db_xref="GOA:Q5LHV9" FT /db_xref="InterPro:IPR001466" FT /db_xref="InterPro:IPR001764" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR019800" FT /db_xref="UniProtKB/TrEMBL:Q5LHV9" FT /protein_id="CAH06271.1" FT /translation="MLKQLLTVVFLLSAGTLWAQQAAGLLPVQEDTHCKEWVEQTLSRM FT KLKDKVGQLFVYTLAPRADKDTEKLVGKLTRKFKVGAFLYSEGTVEDQANLTNYAQRQS FT KIPLMITFDGEWGLAMRLENTPVFPRNAALGCISDNTLIEAYGQEVARELREIGAHVNF FT APDADVNTNPENPVIHVRSFGENPKTVAEKVIAYGRGLETGGILSVSKHFPGHGDTDVD FT SHQALPAVYYNRARLDSVELYPFKEAIQAGLGGVMVGHLQVPALEPDRITPSSLSHSIV FT TDLLRGELGFNGLVFTDALAMKGVAAESDVTVKALKAGNDMVLVQQNVEKAQESVVQAI FT KDGRLTMEEIDAKCRRILAYKYRLGLSRRPMIPVDGLSDRIHTPEAQALVTKLRTSAVT FT VLGNYFQILPLTATKGEIAVLTVGDEGSDASFIEGLRSELPLKTFRMDKNTGEEERRKI FT VKELGNYRRVVVCITVQDKEAGEYRSFFAGFRPQAPVVYAFFTSYRALASFEEAAARSA FT AVVLAHSGEEDLQRYVADVVLGKASATGRLSMRIGNTFAAGSGVDVISGSPAGIAPEDY FT GLKSYRLHRIDSVVAAGLAAKAFPGCQVLVLRHGQPVYDKCFGTHSVTDTTPVRATDLF FT DLASLTKTSATLLAVMKLYDQGRIELTDAVSKYVPALRATNKKNITIRELLLHESGLVP FT YIRFYRDAIDEYSVTGPFTQGFVDEWHHTRMGEYTYACSDFKFKKGLVSATKTSGHTLQ FT IADGLWLDKKFKAAMMKSIAQSELDRKRFVYSDIGFILLQQVVEAVTGKTLDAYLVSEF FT YRPMGLEHTLFQPLNRYKKADIMPTAANDYLRRQDLCGYVYDEAAAFMGGVSGNAGLFS FT TAQELGKIYQMILNEGELDGKRYLRPETCRIFTTEKSAVSHRGLGYDKPNLKDPKANAC FT ASSAPASVYGHTGFTGTCAWVDPENDLVYIFLSNRLCPDAWNGKLNSMKIRQAIQEVIY FT QSLYTPE" FT misc_feature 596875..596931 FT /note="Signal peptide predicted for BF0516 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.983 between residues 19 and 20" FT misc_feature 596974..597903 FT /note="Pfam match to entry PF00933 Glyco_hydro_3, Glycosyl FT hydrolase family 3 N terminal domain, score 221.9, E-value FT 8.3e-64" FT misc_feature 597724..597777 FT /note="PS00775 Glycosyl hydrolases family 3 active site." FT misc_feature 598630..599820 FT /note="Pfam match to entry PF00144 beta-lactamase, FT Beta-lactamase, score 175.1, E-value 9.9e-50" FT CDS 599865..602948 FT /transl_table=11 FT /locus_tag="BF9343_0493" FT /old_locus_tag="BF0517" FT /product="putative hydrolase/beta lactamase fusion protein" FT /note="Full length similar to Porphyromonas gingivalis W83 FT glycosyl hydrolase, family 3 PG0011 SWALL:AAQ65269 FT (EMBL:AE017172) (1003 aa) fasta scores: E(): 8.1e-120, FT 38.01% id in 1018 aa, N-terminal region to Alteromonas sp. FT beta-hexosaminidase A precursor CHT60 SWALL:HEXA_ALTSO FT (SWALL:P48823) (598 aa) fasta scores: E(): 1.1e-17, 31.28% FT id in 406 aa, and C-terminal region to Rhodopirellula FT baltica putative esterase RB1608 SWALL:Q7UX25 FT (EMBL:BX294135) (389 aa) fasta scores: E(): 1.9e-16, 30.07% FT id in 409 aa" FT /db_xref="GOA:Q5LHV8" FT /db_xref="InterPro:IPR001466" FT /db_xref="InterPro:IPR001764" FT /db_xref="InterPro:IPR012338" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LHV8" FT /protein_id="CAH06272.1" FT /translation="MEVNGFLQYKMKRRYLLAGLVVSALLGVGAKVPASMDAPVREVFH FT TPPGMSAPIEPLLLYQASQDEKCRHWVDSVYNRMNLREKVGQLFIYTIAPVQTKRNMQL FT LRDAVHTYKVGGLLFSGGKIQNQATLTNEAQRMARCPLLITFDGEWGLSMRLRGTPVFP FT RNMVLGCIQDNRLIYEYGREMARQCREMGVQVNFAPVADVNINPDNPVINTRSFGEDPV FT KVADKVIAYASGLESGKVLSVCKHFPGHGDTDVDSHKALPVLPFTRERLDSVELYPFKE FT AIRAGVSGMMVGHLQVPVIEPIGDLPSSLSRNVVYGLLTEELAFKGLIFTDALAMKGVA FT GNKSVCLQALQAGNDLVLAPRRLKEEMDAVLEAVEKGELPEEEINAKCRKVLTYKYILG FT LERKPFVKLSGLGTRINTPQTRDLISRLNLAAITVLNNKNDVLPLHPDLKEAAILNVGK FT PEEIEPFDRKMKKYTSFARFQLRKDLPEAEQQKLRDSLAAYRRVIVTVTEQRLAPYQSF FT FAKFAPESPVIYVFYTPAKSMLQIQRAVSAAEAVVLAHASRDDVQERVADLLFGKATAD FT GRLSASIGGLFPTGSGVTITPHTPFHFVPEEYGMKSEVLRRIDTIALEGIKEGAYPGCQ FT VLVMKDGKALYDRCFGYHTDTNSEKVKPTDIYDLASLSKTTGTLLAIMKLYDKGRFNLT FT DKVSDYLPFLRKTNKENLTIRELLMHQSGLPSGLLFYQEAIDGKSYKGSLFKQSKDALH FT TVRLGVRTWGNPRFRFNKGMASKEKNGDYTLQVCDSLWLNRSFREEIRKKIAEAPLKDK FT SYRYSDVGFILLQMLAEELSGKPMDEYLWQEFYQPMGLEHTAYLPLRYFDKKEVVPSAV FT DRFLRKTTLQGFVHDESAAFQGGISGNAGLFSNAREVGRIYQMLLNGGELDGRRYLSKE FT TCALFTTEKSKISRRGLGFDKPDVVNESKSPCAASVPVTVYGHTGFTGTCAWVDPDNGL FT IYVFLSNRTYPDAWVNKLSKLEIREKIQETIYEAMKEK" FT misc_feature 599865..599954 FT /note="Signal peptide predicted for BF0517 by SignalP 2.0 FT HMM (Signal peptide probability 0.862) with cleavage site FT probability 0.637 between residues 30 and 31" FT misc_feature 600087..600995 FT /note="Pfam match to entry PF00933 Glyco_hydro_3, Glycosyl FT hydrolase family 3 N terminal domain, score 215.2, E-value FT 8.2e-62" FT misc_feature 601716..602906 FT /note="Pfam match to entry PF00144 beta-lactamase, FT Beta-lactamase, score 179.3, E-value 5.3e-51" FT repeat_region 603174..603222 FT /note="Group 2 - fin invertible region AA" FT repeat_region 603196..603212 FT repeat_region 603197..603530 FT /note="invertible region AA; active in shotgun" FT repeat_region complement(603508..603552) FT /note="Group 2 - fin invertible region AA rc" FT repeat_region complement(603515..603531) FT CDS 603565..606756 FT /transl_table=11 FT /locus_tag="BF9343_0494" FT /old_locus_tag="BF0518" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT4357 SWALL:AAO79462 (EMBL:AE016945) (1178 aa) FT fasta scores: E(): 8.1e-216, 53.22% id in 1071 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT0754 FT SWALL:AAO75861 (EMBL:AE016929) (1138 aa) fasta scores: E(): FT 5.7e-130, 46.49% id in 1069 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT1619 SWALL:AAO76726 FT (EMBL:AE016932) (1150 aa) fasta scores: E(): 4.7e-123, FT 43.62% id in 1075 aa. CDS truncated 110 amino acids at the FT N-terminus" FT /db_xref="GOA:Q5LHV7" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LHV7" FT /protein_id="CAH06273.1" FT /translation="MFATSLETYENQSVAAVQQARKITGTLTDAVGEPIIGATVLEKGN FT PSNGTITDINGKFSLSVHPNAVISISYIGYITQNIKITNQTSLKVVMMDDTQALEEVVV FT VGYGSQKKANLTGAVSSVKMDEVLGDRPILNASDALQGAVPGLFVSNGGNAPGTSKSFQ FT IRGAYSVGVKNSDGSYGNTIKPLVLIDNVEGDLDMVNPEDIESISVLKDAASAAIYGAR FT AAGGVIVVTTKRPKGAAKFSLNYNNNFAFGTAVNLPKQAPLMDYLQAYLDCGYSDAYWS FT LGSPSVSKWMEYLSEYQKNPSAFNTVGDGIYMDESGVPYYLNEKDLYKNFMETSFQMTH FT NISASGGTDKLRYRISGGYTSNDGVLVSDRDKFERMNINTFISADVTNWFTQEVTMSYA FT HSLQTSPGGMGGVYNTRLVSYYPEGDLPASVNTLANEDLPLFIPRNQILLSNPVNNNND FT NPRIFLKSILKPLKGLEAVFEYTFDKNIYDYHWYTGQYDYTTIQGGSSKSFVDDYLRKY FT KQHTNYNAINVYATYSKKFGDHNFKVMAGFNQESSYQETLDAYSYNQAVIDVPAMGSGT FT GTIKATDSYSEYAVRGGFFRVNYNYQDKYLLEVNGRYDGSSKFPKSSRFGFFPSVSAGW FT QIAQEKFMESTRNWLDGLKIRASYGVIGNQNVNPYTFTPTMSVSNKSTSWIIDNTYVTS FT ISSLPALVSQNFTWEKVGTVNVGLDINLFNNRLNGVFEWYQRNTNGMLAPGVQLPAVVG FT ASAPYQNTADMRTRGWELSLNWRDQIGKVGYRLGFNLSDYKSKITKYDDNATTKLLSSF FT YPGQVMGEIWGYIADGYYSVDDFEDTSSWKLKEGITSINGYNVRPGDVKFKNLRDDESS FT TNVITSGDNTFDNPGDRKVIGNTTPRYQYGINLGANYAGFDLNVILQGTGKRDYWISNV FT LTFPMNGDNFIPLFDGLSDYWMPKDPDNGDWTAVNPNAKYPRLYGNRGNSGSNLRQSDK FT YLSDASYLRIKNITLSYNLPKKWLSQIFLSQMKAFVSVENVATFTSLPSGIDPERIEWN FT YPAFRTVSFGINITL" FT misc_feature 603565..603759 FT /note="PS00430 TonB-dependent receptor proteins signature FT 1." FT misc_feature 603904..606363 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -2.5, E-value 0.0002" FT CDS 606772..608742 FT /transl_table=11 FT /locus_tag="BF9343_0495" FT /old_locus_tag="BF0519" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4358 SWALL:AAO79463 (EMBL:AE016945) (628 aa) FT fasta scores: E(): 1.4e-42, 49.09% id in 660 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT0755 FT SWALL:AAO75862 (EMBL:AE016929) (601 aa) fasta scores: E(): FT 2.6e-33, 38.35% id in 657 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT1620 SWALL:AAO76727 FT (EMBL:AE016932) (618 aa) fasta scores: E(): 3.3e-26, 38.13% FT id in 666 aa, and to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT0030 SWALL:AAO75137 (EMBL:AE016926) (609 aa) FT fasta scores: E(): 2.4e-07, 26.79% id in 698 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LHV6" FT /protein_id="CAH06274.1" FT /translation="MNMKKILLFLTLFTGMILAGCNDSFLEKYPVTSLTEENAFKSYDN FT FKAFMWPCYEMFSNTNIATSTTAIGRNSHYMGDVYAGYLNQRGASSQNKYAFQTVTNAT FT SGNGWNFSTFIRRINLMLSHVDDSDMTEAEKNHWKAVGYFFHSFWYMELIDRFGDVPWI FT DKPLDETSEEAYGTRMPRLEVADKVLERLQWAEQNIGDASVYEKKDGSNTINRDCVRAA FT LSRFTLREATWRKYHELGSYDKYFDECIRVSKLLMADYPTLYYGTDGQPAAGYGEMWTT FT EDLSKVQGVILYQQWLETIKPGHSCYYEHTSSHDIEMHQGTVDLYLCKDGKTISHSDQY FT QGDKDIYATFRNRDPRMYHTIMPPYKVKDGKGDYSTWSYTSDPADREYIDIMGANESCS FT NPGIGMKRLPGQNWSASLVRRVPNLQGGAQYTIEGKKYGPHAYVASRSGYYVWKNWDNW FT EENYNNAQVNTADKPVFKIEEVLLNYAEAMFETNQFTQTIADETINKLRKRAGVADMVV FT AQIDGNFDPKRGKYYPKGNDNGILVDPVLWEIRRERIIELMGEGFGFYDVRRWRMAPWF FT VNMQQKGMWISKTELSSLTLLNEMTGTSDGANGSMTEGYIYLFNDPLKEGKGWLEKYYL FT YQVPLEEIALNPNLTQNPGWE" FT misc_feature 606772..606828 FT /note="Signal peptide predicted for BF0519 by SignalP 2.0 FT HMM (Signal peptide probability 0.965) with cleavage site FT probability 0.416 between residues 19 and 20" FT misc_feature 606802..606834 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 608937..610397 FT /transl_table=11 FT /locus_tag="BF9343_0496" FT /old_locus_tag="BF0520" FT /product="putative arylsulfatase" FT /note="Similar to Strongylocentrotus purpuratus FT arylsulfatase precursor SWALL:ARS_STRPU (SWALL:P50473) (567 FT aa) fasta scores: E(): 1.2e-17, 30.76% id in 429 aa, and to FT Bacteroides thetaiotaomicron arylsulfatase precursor BT1636 FT SWALL:AAO76743 (EMBL:AE016932) (509 aa) fasta scores: E(): FT 7e-52, 43.13% id in 524 aa, and to Escherichia coli O6 FT hypothetical protein C0022 SWALL:Q8FLC3 (EMBL:AE016755) FT (509 aa) fasta scores: E(): 1.1e-38, 33.05% id in 481 aa" FT /db_xref="GOA:Q5LHV5" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:Q5LHV5" FT /protein_id="CAH06275.1" FT /translation="MNQKLLLGSALLVGMASTQQALARQKKAKEQTRPNVVFILADDLG FT YGDLSCYGQEKFETPNIDRLAQNGMRFTQCYSGTTVSAPSRSCLITGTHSGHTAIRGNK FT ELAPEGQFPLPENSQTIFNDFRNAGYRTGAFGKWGLGYIGSAGDPYKQGIDQFYGYNCQ FT LLAHSYYPDHLWDNDKRVDLPDNNLNVQYGKGTYSQDLIHSKALAFLDEAAKEKDQPFF FT MWYPTIIPHAELIVPEDSIIKKFRGKYPEKPYRGVEPGSPAFRKGGYCTQFYPHATFAA FT MVYRLDVYVGQIVQKLKDMGVYDNTIIIFSSDNGPHMEGGADPDFFNSNGIWRGYKRDV FT YEGGIRVPMIISWPGHVQPSTETDFMCSFWDLMPTFREVLNPKADTRNMDGVSILPLLQ FT NRKGQKEHEYLYFEFLEMNGRQAVRKGDWKLVHMNIRGNKPYYELYNLASDPSEKYNVL FT NQYPEKADELKAIMKEAHIEDSNWPLFR" FT misc_feature 608937..609005 FT /note="Signal peptide predicted for BF0520 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.895 between residues 23 and 24" FT misc_feature 609036..610115 FT /note="Pfam match to entry PF00884 Sulfatase, Sulfatase, FT score 164.2, E-value 1.9e-46" FT CDS complement(610521..611147) FT /transl_table=11 FT /locus_tag="BF9343_0497" FT /old_locus_tag="BF0521" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2438 SWALL:AAO77545 (EMBL:AE016936) (208 aa) FT fasta scores: E(): 7e-69, 76.44% id in 208 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT1074 FT SWALL:AAO76181 (EMBL:AE016930) (211 aa) fasta scores: E(): FT 1.6e-38, 49.52% id in 212 aa" FT /db_xref="GOA:Q5LHV4" FT /db_xref="InterPro:IPR011250" FT /db_xref="UniProtKB/TrEMBL:Q5LHV4" FT /protein_id="CAH06276.1" FT /translation="MKTMKYISLRVLAIAALALAFAMPAKAQLSDNGYANVDWQFNAPL FT KNHFADKASGWGMNFEGGYFVTPNLGLGLFMNYSSNHEYFPRATFPVGEGTVNTDQQHT FT IFQLPFGAAARYQMNRGGAWQPYFGVKLGANYAKVRSNYNMFETRDNTWGFYVSPEIGL FT NVYPWAYGPGLHIAVYYSYATNKANVLTYNVDKLNNFGFRVGLAF" FT misc_feature complement(611067..611147) FT /note="Signal peptide predicted for BF0521 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.909 between residues 27 and 28" FT misc_feature complement(611073..611129) FT /note="1 probable transmembrane helix predicted for BF0521 FT by TMHMM2.0 at aa 7-25" FT CDS complement(611165..611797) FT /transl_table=11 FT /locus_tag="BF9343_0498" FT /old_locus_tag="BF0522" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2437 SWALL:AAO77544 (EMBL:AE016936) (210 aa) FT fasta scores: E(): 7.3e-60, 66.66% id in 210 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT1073 FT SWALL:AAO76180 (EMBL:AE016930) (214 aa) fasta scores: E(): FT 9.3e-31, 42.32% id in 215 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHV3" FT /protein_id="CAH06277.1" FT /translation="MKRLIPILLAVFAFAACEKDPDMDKLDNDYLVYTNYDKKADFKQF FT STYYIPDSVLVIGDKKDPEYWKGEAAEAIINAYKENLNSKGFTYTDNKDAADLGIQVSY FT VQSTYYFTDYGQPEWWWNYPGYWDAPYWGNWGGWYYPYVVNYSITTNSFLTEIMNLKAP FT EGEKQKLPVLWSSFLSGPASYSGKVNQTLVVRAINQSFAQSPYLTNK" FT misc_feature complement(611744..611797) FT /note="Signal peptide predicted for BF0522 by SignalP 2.0 FT HMM (Signal peptide probability 0.977) with cleavage site FT probability 0.451 between residues 18 and 19" FT misc_feature complement(611747..611779) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 611906..613273 FT /transl_table=11 FT /locus_tag="BF9343_0499" FT /old_locus_tag="BF0523" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT secreted tripeptidyl aminopeptidase BT2436 SWALL:Q8A511 FT (EMBL:AE016936) (454 aa) fasta scores: E(): 1.9e-128, FT 70.65% id in 443 aa, and to Streptomyces coelicolor FT secreted tripeptidyl aminopeptidase sco2761 or SCC57A.32c FT SWALL:Q9RDG7 (EMBL:AL939113) (474 aa) fasta scores: E(): FT 1.1e-37, 34% id in 447 aa, and to Streptomyces avermitilis FT putative secreted tripeptidyl aminopeptidase sav5300 FT SWALL:Q82CP3 (EMBL:AP005042) (482 aa) fasta scores: E(): FT 1.5e-37, 32.77% id in 421 aa" FT /db_xref="GOA:Q5LHV2" FT /db_xref="InterPro:IPR008758" FT /db_xref="InterPro:IPR008761" FT /db_xref="UniProtKB/TrEMBL:Q5LHV2" FT /protein_id="CAH06278.1" FT /translation="MQYDYLEALVKDLSLYKIKTEINMKNLRIWQTLSLWLVLLVTSLP FT LSAQTALLEKLGKIADITGTQPLESTEFVEKYVAYFTQPLDHRHPEKGSFSQRVIVSHV FT GFDRPTVMVTEGYGASYALGANYREELSKLFNTNMIFVEYRYFLESTPTPKDWQYLTAE FT NSAEDLHAVREAFRSIYPGKWIATGISKGGQTAMLYRTFFPEDVDISVPYVAPLCYGVE FT DGRHEPFLKMVSTPEARKKIEDFQLEVLKRKPTLLPRFEKYCAGKKYKFRAPVEEIYDY FT SVLEYSFSIWQWGTPVDQIPAVTASDDELFKHLLAISEPSYFEEEGANTSFFVQAAREL FT GYYGYDIRPFKKYLTIKTSKDYLKRLMLPEELGDMKFDKTLSRKIIHFLKNNDPKMIFI FT YGQNDPWTAAGVTWLKGKKNIHVFVEPNGSHLARIGTLPQKEKEEAIGLIKKWLEE" FT CDS complement(613432..613782) FT /transl_table=11 FT /locus_tag="BF9343_0500" FT /old_locus_tag="BF0524" FT /product="putative MarR family transcriptional regulator" FT /note="Similar to Bacteroides thetaiotaomicron MarR family FT transcriptional regulator BT2435 SWALL:AAO77542 FT (EMBL:AE016936) (122 aa) fasta scores: E(): 6.1e-22, 57.75% FT id in 116 aa, and to Sulfolobus solfataricus FT transcriptional regulator, MarR family, putative SSO1082 FT SWALL:Q97Z53 (EMBL:AE006726) (154 aa) fasta scores: E(): FT 7e-05, 38.55% id in 83 aa" FT /db_xref="GOA:Q5LHV1" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q5LHV1" FT /protein_id="CAH06279.1" FT /translation="MNTICKMRDIYKALSIFETAFEEVYGISLNEAMVLCALREAGKEI FT TSTAIAERTEMAPSHTSKVIRAVEDKGLIRRALGEVDKRQMYFSLTEAGKKRLNELDLD FT KVEIPEMLKPLI" FT misc_feature complement(613435..613704) FT /note="Pfam match to entry PF01047 MarR, MarR family, score FT 37.1, E-value 3.4e-08" FT misc_feature complement(613585..613650) FT /note="Predicted helix-turn-helix motif with score FT 1201.000, SD 3.28 at aa 45-66, sequence FT ITSTAIAERTEMAPSHTSKVIR" FT CDS complement(613792..616272) FT /transl_table=11 FT /locus_tag="BF9343_0501" FT /old_locus_tag="BF0525" FT /product="putative pyridine nucleotide oxidoreductase" FT /note="Similar to Staphylococcus aureus coenzyme A FT disulfide reductase SWALL:O52582 (EMBL:AF041467) (438 aa) FT fasta scores: E(): 9.7e-47, 35.57% id in 447 aa, and to FT Listeria innocua hypothetical protein Pli0040 SWALL:Q926L9 FT (EMBL:AL592102) (557 aa) fasta scores: E(): 2.4e-67, 38.79% FT id in 549 aa, and to Archaeoglobus fulgidus NADH oxidase FT af0400 SWALL:O29847 (EMBL:AE001077) (551 aa) fasta scores: FT E(): 5.5e-67, 40.18% id in 550 aa" FT /db_xref="GOA:Q5LHV0" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR001455" FT /db_xref="InterPro:IPR001763" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016156" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:Q5LHV0" FT /protein_id="CAH06280.1" FT /translation="MKIIIIGGVAGGATTAARIRRSDETAEIILLEKGKYISYANCGLP FT YYIGDVIEEREKLFVQTPEAFGVRFRVDVRTENEVIFIDRKKKTVTVRLKSEDTYEESY FT DKLLISTGASPVRPPLPGIDSTGIFTLRNVADTDRIKAYVNNRPPRRAVVIGAGFIGLE FT MAENLHALGAQVSIVEMGNQVMAPIDFSMAALVHQHLMEKGVNLYLEQAVASFEQAGKE FT VKVVFKNGQSILADIVILSIGVRPETTLARAAELTIGEAGGIAVNDYLQTSDESIYAIG FT DAIEFRHPITGKPWLNYLAGPANRQGRIVADNLLGAQIPYEGAIGTSIAKVFDMTVAST FT GLPGKRLKQAGIVYASSTTHPASHAGYYPDAMPMSIKITFDPQTGKLYGGQIVGYDGVD FT KRIDELSLVIKHEGTIYDLMKVEQAYAPPFSSAKDPVAIAGYVAENIILGRVKPVYWRD FT LRDIELKDVFLLDVRTPDEFALGSLPGAVNIPLDEIRDRIAELPSNKPIYTFCAVGLRG FT YLVYRILIQHGFKEVYNLSGGLKTYRAATAPIILHENEETDDTPSAQDSPAEPSVAAEA FT PQTTTAANPKTIRVDACGLQCPGPVLKMKKTMDTLVPGERVEIVATDPGFSRDAAAWCN FT STGNKFISKDSTGGKSVVVIEKGEPQACNLTTTCDSKGKTLIMFSDDLDKALATFVLAN FT GAAATGQKVTIFFTFWGLNVIKKLHKPKVEKDIFGKMFGTMLPSSSLKLKLSKMSMGGM FT GGKMMRYIMHRKGIDSLESLRQQALENGVEFIACQMSMDVMGVKREELLDEVTVGGVAT FT YMERADNANINLFI" FT misc_feature complement(614302..614517) FT /note="Pfam match to entry PF01206 UPF0033, Uncharacterized FT protein family UPF0033, score 39.6, E-value 5.9e-09" FT misc_feature complement(614638..614919) FT /note="Pfam match to entry PF00581 Rhodanese, FT Rhodanese-like domain, score 45.9, E-value 7.5e-11" FT misc_feature complement(614962..615294) FT /note="Pfam match to entry PF02852 pyr_redox_dim, Pyridine FT nucleotide-disulphide oxidoreductase, dimerisation domain, FT score 52.5, E-value 8.2e-13" FT misc_feature complement(615394..616269) FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 284.9, E-value FT 8.7e-83" FT CDS complement(616591..618009) FT /transl_table=11 FT /locus_tag="BF9343_0502" FT /old_locus_tag="BF0526" FT /product="putative aspartate kinase" FT /EC_number="2.7.2.4" FT /note="Similar to Escherichia coli lysine-sensitive FT aspartokinase III LysC or Apk or B4024 SWALL:AK3_ECOLI FT (SWALL:P08660) (449 aa) fasta scores: E(): 6.2e-19, 23.94% FT id in 451 aa, and to Chlorobium tepidum aspartokinase LysC FT or CT0095 SWALL:Q8KG73 (EMBL:AE012788) (470 aa) fasta FT scores: E(): 8.3e-23, 26.18% id in 466 aa, and to FT Arabidopsis thaliana putative aspartate kinase F1c9.20 or FT f28j7.35 SWALL:Q9S702 (EMBL:AC011664) (559 aa) fasta FT scores: E(): 4.4e-20, 27.06% id in 484 aa" FT /db_xref="GOA:Q5LHU9" FT /db_xref="InterPro:IPR001048" FT /db_xref="UniProtKB/TrEMBL:Q5LHU9" FT /protein_id="CAH06281.1" FT /translation="MKRRQIRKKNRITKKNREMKIYKFGKIPTGSVQGMKGMLRLIDNS FT IPKIIVLSATTETTERLAGIAAHLFNRDTEQAHDEISRLEFRFIDFANELFNDESIKQQ FT AVDSIIDRFRTLWNFTRQRFTSVDEKDILAQGEFISSMLVSLYLKEQGINNRLLNSLDF FT MRLAPEEEPDMEYIGTKLHLLLAEHKSTNVFLTQGHLCRNAYNETCYLKQGGDDVSATL FT IGAALQAQEVCLWTDSKELHSCDPRFVKHPAMVKQLSFDEAEQLAYCGWTGFNPHCILP FT ARENNIPIRLLCSMEPAEGGTLISNSQSGENIKAITARDNIYYIKFQSNRTLRPYLFIS FT KIFDTFAKYHTSLCLFASSGSDVSVAINDKERLSHILHELSRYAATVVKDHMCILSAIG FT NMQWQCAGFEARIINALATIPIRMISYGSNNNNVSLVIRAEDKREALQRLNDTLFAPCH FT ANPSQIHVPTLKHS" FT misc_feature complement(617131..617958) FT /note="Pfam match to entry PF00696 aakinase, Amino acid FT kinase family, score -5.4, E-value 7.8e-05" FT CDS 618260..619603 FT /transl_table=11 FT /locus_tag="BF9343_0503" FT /old_locus_tag="BF0527" FT /product="putative two-component response regulator-like FT protein" FT /note="Similar to Escherichia coli acetoacetate metabolism FT regulatory protein AtoC or Az or B2220 SWALL:ATOC_ECOLI FT (SWALL:Q06065) (461 aa) fasta scores: E(): 1.9e-57, 39.91% FT id in 451 aa, and to Bacteroides thetaiotaomicron FT two-component system response regulator BT2433 FT SWALL:AAO77540 (EMBL:AE016936) (446 aa) fasta scores: E(): FT 1.9e-138, 86.57% id in 447 aa, and to Escherichia coli O6 FT acetoacetate metabolism regulatory protein AtoC or C2763 FT SWALL:Q8CXY6 (EMBL:AE016763) (461 aa) fasta scores: E(): FT 1.5e-57, 39.91% id in 451 aa" FT /db_xref="GOA:Q5LHU8" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR002078" FT /db_xref="InterPro:IPR002197" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR020441" FT /db_xref="UniProtKB/TrEMBL:Q5LHU8" FT /protein_id="CAH06282.1" FT /translation="MSKILIIDDEVQIRGLLARMMELEGYEVCQAGDCKTALRQLELQM FT PDVALCDVFLPDGNGVDLVTEMKKKSPGVEIILLTAHGNIPDGVQAIKNGAFDYITKGD FT DNNKIIPLISRAVEKARMNIRLDKLEKKMGLMYSFDSILGESKALKEAVSLARKVSVTD FT VPVLLTGETGTGKEVFAQSIHYSSKRARQNFVAVNCSSFSKELLESEMFGHKAGSFTGA FT LKDKKGLFEEANNGTIFLDEIGEMAFELQAKLLRILETGEYIKIGDTKPTHIDVRIIAA FT TNRNLPAEIAAGRFREDLFYRLSVFQVHLPPLRERTGDIKILAESFVRSFSEKLSHPVN FT RIAPAYLEALCQQPWKGNIRELRNVIERSLIVCEGDRLDVDDLPLEIQNSHYEKSDEGM FT PGSFELSAMERRHIARVLEYTKGNKTEAARLLKIGLTTLYRKIEEYKL" FT misc_feature 618263..618622 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 103.2, E-value 4.3e-28" FT misc_feature 618683..619348 FT /note="Pfam match to entry PF00158 Sigma54_activat, FT Sigma-54 interaction domain, score 416.9, E-value 1.6e-122" FT misc_feature 618755..618796 FT /note="PS00675 Sigma-54 interaction domain ATP-binding FT region A signature." FT misc_feature 618941..618988 FT /note="PS00676 Sigma-54 interaction domain ATP-binding FT region B signature." FT misc_feature 619472..619594 FT /note="Pfam match to entry PF02954 HTH_8, Bacterial FT regulatory protein, Fis family, score 57.3, E-value FT 2.9e-14" FT misc_feature 619523..619588 FT /note="Predicted helix-turn-helix motif with score FT 1534.000, SD 4.41 at aa 422-443, sequence FT GNKTEAARLLKIGLTTLYRKIE" FT CDS 620044..621750 FT /transl_table=11 FT /gene="kdpA" FT /locus_tag="BF9343_0504" FT /old_locus_tag="BF0528" FT /product="putative potassium-transporting ATPase" FT /EC_number="3.6.3.12" FT /note="Similar to Clostridium acetobutylicum FT potassium-transporting ATPase A chain KdpA or CAC3682 FT SWALL:ATKA_CLOAB (SWALL:O32327) (557 aa) fasta scores: E(): FT 8.7e-95, 43.56% id in 567 aa, and to Bacteroides FT thetaiotaomicron K+-transporting ATPase A chain BT2425 FT SWALL:AAO77532 (EMBL:AE016936) (568 aa) fasta scores: E(): FT 0, 92.07% id in 568 aa, and to Deinococcus radiodurans FT potassium-transporting ATPase A chain KdpA or drb0086 FT SWALL:ATKA_DEIRA (SWALL:Q9RZN7) (568 aa) fasta scores: E(): FT 1.7e-91, 42.16% id in 574 aa" FT /db_xref="GOA:Q5LHU7" FT /db_xref="InterPro:IPR004623" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHU7" FT /protein_id="CAH06283.1" FT /translation="MNTEILGVAVQIVLMVVLAYPLGRYIARVYKGEKTWSDFMAPIER FT VIYKICGINPQEEMNWKQFLKALLILNAFWFVWGMVLLVSQGWLPLNPDGNGAQTPDQA FT FNTCISFMVNCNLQHYSGESGLTYFTQLFVIMLFQFITAATGMAAMAGVMKSMAAKSTQ FT TIGNFWHFLVISCTRILLPLSLVVGFILILQGTPMGFDGRMQLTTLEGQEQMVSQGPTA FT AIVPIKQLGTNGGGYFGVNSSHPLENPTYLTNMVECWSILIIPMAMVLALGFYTNRRKL FT GYSIFGVMLFAYLAGVFINVGQEMGGNPRISEMGIAQDHGAMEGKEVRLGAGATALWSV FT TTTVTSNGSVNGMHDSTMPLSGMVEMLNMQINTWFGGVGVGWLNYYTFIIMAVFISGLM FT VGRTPEFLGKKVEAREMKIATFVALLHPFVILVFTAISSYVYTHHPDFVESEGGWLNNL FT GFHGLSEQLYEYTSSAANNGSGFEGLGDNTYFWNWTCGIVLILSRFIPIVGQVAIAGLL FT AQKKFIPESAGTLKTDTVTFAVMTFAVIFIVAALSFFPVHALSTIAEHLSL" FT misc_feature order(620056..620124,620245..620313,620425..620493, FT 620554..620622,620797..620865,620884..620952, FT 621175..621243,621304..621372,621526..621594, FT 621652..621720) FT /note="10 probable transmembrane helices predicted for FT BF0528 by TMHMM2.0 at aa 5-27, 68-90, 128-150, 171-193, FT 252-274, 281-303, 378-400, 421-443, 495-517 and 537-559" FT misc_feature 620059..621747 FT /note="Pfam match to entry PF03814 KdpA, FT Potassium-transporting ATPase A subunit, score 831.6, FT E-value 2.4e-247" FT CDS 621772..623820 FT /transl_table=11 FT /gene="kdpB" FT /locus_tag="BF9343_0505" FT /old_locus_tag="BF0529" FT /product="putative potassium-transporting ATPase B chain" FT /EC_number="3.6.3.12" FT /note="Similar to Clostridium acetobutylicum FT potassium-transporting ATPase B chain KdpB or CAC3681 FT SWALL:ATKB_CLOAB (SWALL:O32328) (685 aa) fasta scores: E(): FT 8.4e-145, 60.29% id in 685 aa, and to Bacteroides FT thetaiotaomicron K+-transporting ATPase B chain BT2424 FT SWALL:AAO77531 (EMBL:AE016936) (677 aa) fasta scores: E(): FT 1.7e-209, 88.27% id in 682 aa, and to Thermoanaerobacter FT tengcongensis potassium-transporting ATPase B chain KdpB or FT TTE2011 SWALL:ATKB_THETN (SWALL:Q8R8I6) (681 aa) fasta FT scores: E(): 6.9e-146, 61.98% id in 684 aa" FT /db_xref="GOA:Q5LHU6" FT /db_xref="InterPro:IPR000150" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006391" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR018303" FT /db_xref="InterPro:IPR023214" FT /db_xref="InterPro:IPR023299" FT /db_xref="InterPro:IPR023300" FT /db_xref="UniProtKB/TrEMBL:Q5LHU6" FT /protein_id="CAH06284.1" FT /translation="MKNKMSASMFQKEQVIESIRQSFVKLNPRMMIKNPIMFTVEVVTV FT IMLVVTLLSLFTPEYGTFGYNLCVFLILFVTLLFANFAEAIAEARGKAQADSLRKTREE FT TPAKLVIGDKVQTVSSSKLKKGDVFVCEAGDTIPADGEIIEGLASIDESAITGESAPVI FT REAGGDKSSVTGGTKVLSDHIKVLVTQQPGESFLDKMIALVEGASRQKTPNEIALTILL FT AGFTLVFVIVCVTLIPFADYTSLEHPGTAISIAAILSLFVCLIPTTIGGLLSAIGIAGM FT DRALRANVITKSGKAVETAGDIDTLLLDKTGTITIGNRRATKFHSAPGVGPREFVTTCL FT LASLSDETPEGKSIVELGRESGVRMRSLQTAGARMIQFTAETKCSGVDLADGTQIRKGA FT FDAIRKITEAAGNKFPKEIEEVISEISGNGGTPLVVCVDRKVTGVIELQDIIKPGIQER FT FERLRKMGVKTVMVTGDNPLTAKYIAEKAGVDDFIAEAKPEDKMEYIRKEQQSGKLVAM FT MGDGTNDAPALAQANVGVAMNSGTQAAKEAGNMVDLDNDPTKLIEIVEIGKQLLMTRGT FT LTTFSIANDVAKYFAIVPALFMVAIPELGALNIMNLHSPESAILSAVIFNAIIIPILIP FT LALKGVQYKPIGASALLRRNLLIYGLGGVIVPFVGIKLIDLVVSLFF" FT misc_feature order(621874..621942,621952..622020,622420..622488, FT 622531..622599,623509..623577,623620..623679, FT 623737..623805) FT /note="7 probable transmembrane helices predicted for FT BF0529 by TMHMM2.0 at aa 35-57, 61-83, 217-239, 254-276, FT 580-602, 617-636 and 656-678" FT misc_feature 621985..622668 FT /note="Pfam match to entry PF00122 E1-E2_ATPase, E1-E2 FT ATPase, score 202.9, E-value 4.2e-58" FT misc_feature 622678..623394 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 120.1, E-value 3.5e-33" FT misc_feature 622696..622716 FT /note="PS00154 E1-E2 ATPases phosphorylation site." FT misc_feature 623323..623391 FT /note="PS01229 Hypothetical cof family signature 2." FT misc_feature 623431..623469 FT /note="PS00018 EF-hand calcium-binding domain." FT CDS 623832..624407 FT /transl_table=11 FT /gene="kdpC" FT /gene_synonym="frrA" FT /locus_tag="BF9343_0506" FT /old_locus_tag="BF0530" FT /product="potassium-transporting ATPase c chain" FT /EC_number="3.6.3.12" FT /note="Similar to Clostridium acetobutylicum FT potassium-transporting ATPase C chain KdpC or CAC3680 FT SWALL:ATKC_CLOAB (SWALL:P94606) (204 aa) fasta scores: E(): FT 2e-19, 34.17% id in 199 aa, and to Bacteroides FT thetaiotaomicron potassium-transporting ATPase C chain KdpC FT or BT2423 SWALL:AAO77530 (EMBL:AE016936) (189 aa) fasta FT scores: E(): 6.9e-62, 85.18% id in 189 aa, and to FT Thermoanaerobacter tengcongensis potassium-transporting FT ATPase C chain KdpC or TTE2010 SWALL:Q8R8I7 (EMBL:AE013152) FT (193 aa) fasta scores: E(): 8.9e-27, 45.94% id in 185 aa, FT and from residue 130 is identical to previously sequenced FT Bacteroides fragilis FrrA (fragment) SWALL:Q8VTB5 FT (EMBL:AF329100) (63 aa) fasta scores: E(): 4.5e-18, 100% id FT in 63 aa" FT /db_xref="GOA:Q5LHU5" FT /db_xref="InterPro:IPR003820" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHU5" FT /protein_id="CAH06285.1" FT /translation="MKTLLKSIKITLVFCVFFSVFYILVLWLFAQVAGPNRGNAEVVTL FT NGKVVGAANVGQTFTEEKYFWGRPSCAGDGYDATSSAGSNKGPTNPEYLAEVEARIDTF FT LIHHPYLARKDVPAEMVTASASGLDPDITPQSAYVQVKRVAQARGMNVEEVRRVVDKAV FT EKPLLGIFGTEKVNVLKLNIALEELKNR" FT misc_feature 623832..623927 FT /note="Signal peptide predicted for BF0530 by SignalP 2.0 FT HMM (Signal peptide probability 0.989) with cleavage site FT probability 0.573 between residues 32 and 33" FT misc_feature 623832..624395 FT /note="Pfam match to entry PF02669 KdpC, K+-transporting FT ATPase, c chain, score 196.7, E-value 3.2e-56" FT misc_feature 623865..623933 FT /note="1 probable transmembrane helix predicted for BF0530 FT by TMHMM2.0 at aa 12-34" FT CDS 624417..625166 FT /transl_table=11 FT /gene="frrB" FT /locus_tag="BF9343_0507" FT /old_locus_tag="BF0531" FT /product="conserved hypothetical protein" FT /note="Identical to previously sequenced Bacteroides FT fragilis fragilis regulatory region FrrB SWALL:Q8VTB4 FT (EMBL:AF329100) (249 aa) fasta scores: E(): 2.6e-103, 100% FT id in 249 aa, and to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2422 SWALL:AAO77529 (EMBL:AE016936) FT (248 aa) fasta scores: E(): 4.9e-62, 61.96% id in 255 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT0546 SWALL:AAO75653 (EMBL:AE016928) (241 aa) FT fasta scores: E(): 2.2e-19, 40.55% id in 254 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHU4" FT /protein_id="CAH06286.1" FT /translation="MKNVINKNTILALMVIGMMCFWGSMNANAQQLNVQGDLVSSYVWR FT GMYQTGASIQPTLGFSVGNFSLTAWGSTDFDGTSASAGAAAKEIDLTAAYTLGRSGLTV FT SVADLWWAGQGARKYFNFKSHETAHHFEAGVAYTVQSETFPLSVAWYTMFAGQDKNAEG FT GQNYSSYVEFNYPFRVRMVDLNVTCGMVPYAAPQYNCDGFAVTNVALKGTTQIRFTDKF FT ALPVFAQAVWNPRMEDAHLVFGITLKP" FT misc_feature 624417..624503 FT /note="Signal peptide predicted for BF0531 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.998 between residues 29 and 30" FT misc_feature 624417..637198 FT /note="previously sequenced fragilis regulatory region" FT /note="label: Frr" FT CDS 625262..626389 FT /transl_table=11 FT /gene="kdpD" FT /gene_synonym="frrC" FT /locus_tag="BF9343_0508" FT /old_locus_tag="BF0532" FT /product="putative osmosensitive potassium transport sensor FT protein" FT /EC_number="2.7.3.-" FT /note="Similar to Clostridium acetobutylicum sensor protein FT KdpD or CAC3678 SWALL:KDPD_CLOAB (SWALL:P94608) (900 aa) FT fasta scores: E(): 2.4e-41, 40.72% id in 329 aa, and FT identical to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrC SWALL:Q8VTB3 FT (EMBL:AF329100) (375 aa) fasta scores: E(): 4.6e-133, 100% FT id in 375 aa, and similar to Bacteroides thetaiotaomicron FT FrrC, osmosensitive K+ channel histidine kinase BT2421 FT SWALL:AAO77528 (EMBL:AE016936) (377 aa) fasta scores: E(): FT 6.5e-121, 86.93% id in 375 aa" FT /db_xref="GOA:Q5LHU3" FT /db_xref="InterPro:IPR003852" FT /db_xref="InterPro:IPR006016" FT /db_xref="UniProtKB/TrEMBL:Q5LHU3" FT /protein_id="CAH06287.1" FT /translation="MDREESVQHFLDLIKKSRRGKFKVYIGMIAGVGKSYRMLQEAHDL FT IDNGVDVRIGYIETHGRAGTEALLKGLPVIRRRKLFYKGKELEEMDLEAIIRIHPEIVI FT VDELAHTNVEGSLNEKRWQDVMTLLDEGINVISAVNIQHIESVNEEVQDIAGIEVKERI FT PDSVLQEADEVVNIDLTAEELITRLKAGKIYKPEKIQTALNNFFKTENILQLRELALKE FT VALRVEKKVENEVVMGIGLGVRHEKFMACISSQEKTPRRIIRKVARLATRYNTSFVALY FT VQVPKESMERIDLASQRHLLNHFKLVTELGGEVVQVQSKDILGSIVQVCKEKQISTVCM FT GSPGLRLPGALCSVLKYRRFLNNLAQANIDLIILA" FT misc_feature 625262..626386 FT /note="Pfam match to entry PF02702 KdpD, Osmosensitive K+ FT channel His kinase sensor domain, score 314.0, E-value FT 1.5e-91" FT CDS 626418..627857 FT /transl_table=11 FT /gene="frrD" FT /locus_tag="BF9343_0509" FT /old_locus_tag="BF0533" FT /product="putative two-component sensor histidine kinase" FT /note="Similar to Pseudomonas aeruginosa alginate FT biosynthesis sensor protein KinB SWALL:O34206 (EMBL:U97063) FT (595 aa) fasta scores: E(): 1.1e-24, 26.35% id in 463 aa, FT and identical to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrD SWALL:Q8VTB2 FT (EMBL:AF329100) (479 aa) fasta scores: E(): 3.1e-170, 100% FT id in 479 aa, and similar to Bacteroides thetaiotaomicron FT two-component system histidine kinase, FrrD BT2420 FT SWALL:AAO77527 (EMBL:AE016936) (482 aa) fasta scores: E(): FT 4.1e-145, 85.38% id in 479 aa" FT /db_xref="GOA:Q5LHU2" FT /db_xref="InterPro:IPR000014" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR013767" FT /db_xref="UniProtKB/TrEMBL:Q5LHU2" FT /protein_id="CAH06288.1" FT /translation="MNIKTKLLFGIGILAGMIILLVTLSVVNLQILTATEPDSPVAMPA FT LERALLWISVTGGICILTGLVLLIWLPRSINRPVKELTCGILEIANHNYEKRLDMRGYE FT EFREVSDSFNRMAEKLTEYRDSTLADILSAKKFLEAVVNSIHEPIIGLNTEREILFINN FT EALNVLNMKRENVIRKSAEELSLKNDLLRRLIRELVTPGEKNEPLKIYADNKESYFQAS FT YIPIENAAAEEGEARNLGDVILLKNITEFKELDSAKTTFISTISHELKTPISAIMMSLQ FT LLEDKRVGSLNGEQEQLSKNIRDNSQRLLDITGELLNMTQVEAGKLQMMPKITKPIELI FT EYAIKANQVQADKFNIQIEVDYPQEKIPKLFVDSEKIAWVLTNLLSNAIRYSKENGRVV FT IGVRHKKEYIELYVQDFGKGIDPRYHQSIFDRYFRVPGTKVQGSGLGLSISKDFVEAHG FT GTLTVQSEPGKGSCFVIRLKA" FT misc_feature 626418..626516 FT /note="Signal peptide predicted for BF0533 by SignalP 2.0 FT HMM (Signal peptide probability 0.993) with cleavage site FT probability 0.288 between residues 33 and 34" FT misc_feature order(626436..626504,626562..626630) FT /note="2 probable transmembrane helices predicted for FT BF0533 by TMHMM2.0 at aa 7-29 and 49-71" FT misc_feature 626574..626783 FT /note="Pfam match to entry PF00672 HAMP, HAMP domain, score FT 44.0, E-value 3e-10" FT misc_feature 626823..627008 FT /note="Pfam match to entry PF00989 PAS, PAS domain, score FT 21.1, E-value 2.5e-05" FT misc_feature 627186..627392 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 74.7, E-value 1.7e-19" FT misc_feature 627531..627851 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 116.0, FT E-value 6.2e-32" FT CDS 628014..628577 FT /transl_table=11 FT /gene="rpoE" FT /locus_tag="BF9343_0510" FT /old_locus_tag="BF0534" FT /product="putative RNA polymerase ECF sigma factor" FT /note="Identical to previously sequenced Bacteroides FT fragilis RpoE SWALL:Q8VTB1 (EMBL:AF329100) (187 aa) fasta FT scores: E(): 8.3e-71, 100% id in 187 aa, and to Bacteroides FT thetaiotaomicron RNA polymerase ECF-type sigma factor FT BT1617 SWALL:AAO76724 (EMBL:AE016932) (187 aa) fasta FT scores: E(): 6.4e-24, 39.36% id in 188 aa, and to FT Bacteroides thetaiotaomicron RNA polymerase ECF-type sigma FT factor BT0966 SWALL:AAO76073 (EMBL:AE016929) (183 aa) fasta FT scores: E(): 7.4e-22, 40.22% id in 174 aa" FT /db_xref="GOA:Q5LHU1" FT /db_xref="InterPro:IPR000792" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="InterPro:IPR014327" FT /db_xref="UniProtKB/TrEMBL:Q5LHU1" FT /protein_id="CAH06289.1" FT /translation="MHSEIAEEKLLVSQFSQGSHIAFKALFMRYYPKVRSFIMGLVKSE FT SEAEDLTQEVFLKLWTHREKFCEVEVFGTYLYVLTKNTTFNYLRSRQNRQDSQGTEWVE FT ESTDTTPYEELVAKDLQLLIDMVVENMPPQRQMIFRLNREAGLTNAEIAEKLQISKKTV FT ENHLNLALKELKNALLFFIFLYLC" FT misc_feature 628089..628295 FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 70.8, E-value 2.4e-18" FT misc_feature 628446..628514 FT /note="Pfam match to entry PF00196 GerE, Bacterial FT regulatory proteins, luxR family, score 24.9, E-value FT 2.3e-06" FT misc_feature 628452..628517 FT /note="Predicted helix-turn-helix motif with score FT 1678.000, SD 4.90 at aa 147-168, sequence FT LTNAEIAEKLQISKKTVENHLN" FT CDS 628631..629641 FT /transl_table=11 FT /gene="frrF" FT /locus_tag="BF9343_0511" FT /old_locus_tag="BF0535" FT /product="putative anti-sigma factor" FT /note="Identical to previously sequenced Bacteroides FT fragilis fragilis regulatory region FrrF SWALL:Q8VTB0 FT (EMBL:AF329100) (336 aa) fasta scores: E(): 2e-133, 100% id FT in 336 aa, and Similar to Bacteroides thetaiotaomicron FT putative anti-sigma factor BT1618 SWALL:AAO76725 FT (EMBL:AE016932) (335 aa) fasta scores: E(): 1.6e-31, 34.92% FT id in 335 aa, and to Bacteroides thetaiotaomicron putative FT anti-sigma factor BT0753 SWALL:AAO75860 (EMBL:AE016929) FT (341 aa) fasta scores: E(): 4.9e-25, 30% id in 330 aa" FT /db_xref="InterPro:IPR006860" FT /db_xref="InterPro:IPR012373" FT /db_xref="UniProtKB/TrEMBL:Q5LHU0" FT /protein_id="CAH06290.1" FT /translation="MSYLKNIITYFFHHPASDGVVERVHQRLADTNSGQEKEEVLSGIW FT EQIGFPQADEHQTLRAFEKLEQQIGGDSLKSESSFSRFRIPRWSWIAASIIVPLLLLFG FT SAYLYKETLTIKNELSNVTFIQYYVSNGKREQVTLPDRSKVWLNSGSLLIYPSAFIGNE FT REVYLAGEGYFSVTKDKECPFIVKTNSVSVSVLGTEFNINAYPNIDKVVTTLEEGSIRM FT SLNRFDSSYLLEPDDQIVYIPSTGHIERKRVKASDYSDWRGGGLYFSNSPFKEVIQTIE FT RTYSVQVHLQTSIYQSNNLTIHFYPNESIENIMMLIKEMIPGLEYQIEGKDIYID" FT misc_feature 628898..628957 FT /note="1 probable transmembrane helix predicted for BF0535 FT by TMHMM2.0 at aa 90-109" FT CDS 629760..633173 FT /transl_table=11 FT /gene="frrG" FT /locus_tag="BF9343_0512" FT /old_locus_tag="BF0536" FT /product="putative outer membrane protein" FT /note="Identical to Bacteroides fragilis fragilis FT regulatory region FrrG SWALL:Q8VTA9 (EMBL:AF329100) (1137 FT aa) fasta scores: E(): 0, 100% id in 1137 aa, and similar FT to Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT1875 FT SWALL:AAO76982 (EMBL:AE016933) (1119 aa) fasta scores: E(): FT 5.7e-131, 41.34% id in 1144 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT3103 SWALL:AAO78209 FT (EMBL:AE016939) (1061 aa) fasta scores: E(): 1.6e-70, FT 32.27% id in 1075 aa" FT /db_xref="GOA:Q5LHT9" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR011662" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LHT9" FT /protein_id="CAH06291.1" FT /translation="MNKNRSIRVAAFCLGLMLAGSLQVHAQKVTFRDGTVSLKQAFEKI FT EASSKYKIAYNDSHLNVSRKVSLNQKETEVLEILATILKDTGYTYKKNGNYIVIVPVEQ FT KPASKVKKVKGVVKDASGEAIIGANVLVKGTATGVITDMNGSFELEVPGNAVLQITYIG FT YVQQDVAVKNRDQLAVLLKEDTKTLDEVVVVGYGTMKKKDLTGAVASVKMDDTPLSTIS FT TVSHALAGKAAGLQVNTISAQPGGGTTFRIRGAASTGAGNDPLIIVDGFPVSNAGNVSV FT GYNSDNGTTDNILASINPNDIESIEVLKDASSTAIYGARAGSGVIIITTKRGKEGKPKV FT TYSGSATVQTMATKYEMLDAQDFMIQSNRWFKEKWMYDNKVGIYGGKNESEAGSAYHPK FT YSDADIANPVNDTDWYDRITRTGFQTQHNISINGGTEYTKYLISGNFFNQKGIVKNNGM FT SRYTGRVNLDQKLSKYAKVGINLTVSRNTLDNVPLGAGQNEYASILVSAAQFSPLLSVK FT DENGDYSLNQQAAYIPNPVSLLEISDQTTKERFLATPFVEIKPINELTLKASFGIDRNY FT QRREVYMPKTTLYGEKADGRADIGQYDRSDYLLELTANYAKRLGDHNLNALVGYSFQRF FT TSKYLNAGNQGFLTDAFLFNNLGAGTYEKPWVGSSASKSEMASFFGRVNYTYKDRYLVT FT ATLRADGASNFAKNNRWGYFPSVALGWRFTEENFARSLNLDKVLSNGKLRLSYGQTGNS FT NIGDKSVTYYGTGYNKVFGNKEYTGVYVSQIGNPDLKWETTTEWNVGLDLGFLNNRFNV FT TAEYFHKVVSDLLSSRSVLSYNEVGSIAANIGKTQSQGFELTINTKNFDTKDFSWNTDF FT TFSFYRDKWKERDENWSPNPYDMYNAPLRGYYMYLSDGLIQPGEEVSWMPGALPGQVKL FT KDIDGYAYNEDGTYKTDKHGIPLRTGKPDGKIDYADAVFKGCSDPGYLLGLNNTFRYKN FT FDLNVYFYGQLDLLKSGSYKDYWIVGSGTMTGVNNLYRGYNMPTSAKEVWSHDNTSGKM FT PGYFQYMSNYGYGDYFLEKSWFIRCRNITLGYTLPVKSAKKLVSNVRIYADVNNLFTIT FT PYDGLDVETDDSYWAYPNVRSFSIGLDITF" FT misc_feature 629760..629837 FT /note="Signal peptide predicted for BF0536 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.999 between residues 26 and 27" FT misc_feature 629778..629837 FT /note="1 probable transmembrane helix predicted for BF0536 FT by TMHMM2.0 at aa 7-26" FT misc_feature 630363..633170 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 4.3, E-value 0.00014" FT CDS 633197..634684 FT /transl_table=11 FT /gene="frrH" FT /locus_tag="BF9343_0513" FT /old_locus_tag="BF0537" FT /product="putative outer membrane protein" FT /note="Identical to Bacteroides fragilis fragilis FT regulatory region FrrH SWALL:Q8VTA8 (EMBL:AF329100) (495 FT aa) fasta scores: E(): 4.5e-205, 100% id in 495 aa, and FT similar to Bacteroides thetaiotaomicron putative outer FT membrane protein, probably involved in nutrient binding FT BT1874 SWALL:AAO76981 (EMBL:AE016933) (652 aa) fasta FT scores: E(): 2.2e-35, 31.18% id in 497 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT3311 FT SWALL:AAO78417 (EMBL:AE016940) (506 aa) fasta scores: E(): FT 4.6e-12, 25.25% id in 400 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LHT8" FT /protein_id="CAH06292.1" FT /translation="MKKIIYIFSLFITVIGLLGSCINLESESYDSINTTIFPTNADDAD FT ALVIAAAYGPFRADGYSGLFQCAKGGLASNTDMSTDLLDCKWGDSWWPAVLQLNFTATS FT DIPTSFYGTWANHIGKMTLTLDRISGIDMKEEEKTRLIAETRCGRGWLAYILYDLYGPI FT QIPSLEVLQNPTQKVIVPRSSKEETVKLIEDDLKAAAEVLPAKYSKSDENFGRFTKGLA FT YTVLMKLYMHEKEWGKAVECGREVMKCGYSLVTNYKDIFTLDNEGNDEMIFSCIETRGV FT NEQMWHAHVLPSNYPTTNPNIQKWNGYRMPWQFYHSFDPKDKRLEVICSEYVGTDGVTY FT NETNPGEYLDKGALPIKYGEDPTQTSENSEVDVVVYRYADVLTLMAEALARSNNAVTQE FT AVDRLNDVHTRAGLAAYQLSDFTSLDDFLGAVLKERGHELWGEGCRRSDLIRYGLYIDY FT AIKYKGSTTAKEYMNLMPLPQSVITESSGQVIQNEGY" FT misc_feature 633197..633319 FT /note="Signal peptide predicted for BF0537 by SignalP 2.0 FT HMM (Signal peptide probability 0.910) with cleavage site FT probability 0.326 between residues 41 and 42" FT misc_feature 633227..633259 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 633560..633589 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT CDS 634808..637201 FT /transl_table=11 FT /gene="frrI" FT /locus_tag="BF9343_0514" FT /old_locus_tag="BF0538" FT /product="conserved hypothetical protein" FT /note="Identical to Bacteroides fragilis fragilis FT regulatory region FrrI (fragment) to amino acid residue 196 FT SWALL:Q8VTA7 (EMBL:AF329100) (196 aa) fasta scores: E(): FT 1.5e-79, 100% id in 196 aa" FT /db_xref="GOA:Q5LHT7" FT /db_xref="InterPro:IPR008928" FT /db_xref="UniProtKB/TrEMBL:Q5LHT7" FT /protein_id="CAH06293.1" FT /translation="MLFKRIRVTILLLGLLSFSLRVSAQIVLKHSDWEWKISETGCAEQ FT LIFKGEKRNDTIPFFREGEHAGPSFYAKREGKEVRASWIPDGYASYRSEIDGVLCRISY FT IKDHGQPALRVKLTNNSPVPYQPQKAGLKLGIDTYMDKFPDWFGKYFPTLMRNEKTHFY FT GYLQTPSGHTLGLVSQQPVASWSVDYNLGYQDPAPFWFMGHRIESLNLDLLNELPLPAR FT HPQNLYELKQGESKEWIFTFVNVGNLDNLEHAIARVSDIPLIDIRQTSHAAREEASFTL FT TADNPNVKVTNDAGKELPVVLTKTKGNRWIGKVRLEDAGLYTLSVRSGNKVAEAIWTVH FT HPWQWVMEKARENAARYHQKPTSHAESWYGFYSAFLAARYFPNESLDKQLSNYFDRLYN FT KLHDSVKVEPLYFKTRIQNTSTTIGMLVDKYEAQGDLEDLKKASKLADWMIATSQRENG FT AYYNHGTVYTSVIYIAKSVLELAVLERKLGEQDLFWRTCADRHFLSAKKAVDQLVASQG FT DFQTEGELTFEDGMISCSALQIGMMGVIEQDAVARKYYTDAMLKILNSHDCLTQLRVPD FT GRRRQGTMRYWEAQYDVQMLPNMFNSPHGWSGWRAYATYYAYLLTGDEKWLEQTFNAMG FT AFANLIDYKTGQLRWAFVVDPHLEVEQACSADTKLDFSDLSFGNPHPKLYDTRKFVIGE FT QYVNMISDWQTVNTQDNDVHELFKCIGEAVLTNAFVIERPNGEVVGYNCRVTRKGNTLT FT VKADEKQIVNLHCNLKHSFSVSFDGKTCSLPEGYCDWAFGQSGY" FT misc_feature 634808..634879 FT /note="Signal peptide predicted for BF0538 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.990 between residues 24 and 25" FT CDS 637374..640322 FT /transl_table=11 FT /locus_tag="BF9343_0515" FT /old_locus_tag="BF0539" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3514 SWALL:AAO78620 (EMBL:AE016941) FT (982 aa) fasta scores: E(): 0, 78.38% id in 981 aa, and to FT Caulobacter crescentus hypothetical protein Cc0543 CC0543 FT SWALL:Q9AAQ3 (EMBL:AE005727) (856 aa) fasta scores: E(): FT 3.4e-89, 37.03% id in 702 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT2958 FT SWALL:AAO78064 (EMBL:AE016938) (789 aa) fasta scores: E(): FT 4.2e-78, 36.97% id in 641 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHT6" FT /protein_id="CAH06294.1" FT /translation="MRHLFLLAALFCACISYAQIRVQERLPKSKTGFALTTAKARAKIY FT YDANDALVIKRSAELFARDIQMVTGQKPELIQKRERAKALVIVGTIEKNQWIRELAQKG FT KIDIRPLQGAWERYLIQTVDNPSAGVAKALVIAGSDRRGAAYGLFSISEMMGVSPWYWW FT GDVPVKTHKALYVDAPPTYSKTPSVKYRGIFLNDEDWGLKPWAAKTFEKERGNIGPRTY FT AKICELLLRLKANHLAPAMHPVSTAFYQIPENKLVADTFAIVMGSSHCEPLLLNTASEW FT HSKTMGPWDYNANKDKINEVLGNRVKENCAYENVYTLALRGLHDAAMGGGDVPMKEKVK FT MLENALKDQRSLLTRHIDKPAETIPQAFTPYKEVLEIYSNGLELPDDVTIIWADDNFGY FT MKRLSGPQEQKRTGRAGVYYHISYLGVPHSYLWFSTTPPALMYEELRKAYDTTADRIWL FT ANCGDLKGAEAQVSFFLDMAYDIDQFNENNVHTYPARWLAKIFGEQYYDTLKDITCSHI FT NLAFSRKPEYMGWGYWNNYWGGGEKRTDTEFSFINYNEAGRRLAEYRRIGKKAEEMLAT FT VDKKAKPALYQLLYYPVKGAELMNRMNMTGQLYRQYVRQKRAAADDLKREATTCHDSLE FT IITDGYNSLLDGKWKYMMSLRQNYDGSSSYFMLPLMEESYVATGDPKLAVQVESEQLNR FT GGFSFRALPVFNTYSRKSHWIDVYNQGGGMLDWKSELSDEWIVLSRQSGSTRTEDRIQV FT SIDWNKVPSGEKVTGFIEFSTGMQKERVLVSVFNPKTPVRDELQGLFIEENGYVSLPAT FT AFHRKFESEDVKMSVLPGLGFEGAALQIGSPIAPLQMYRSSEVPRVEYDFYTFNAGMVD FT VYTYVLPTFPLHADRDYKLPEHTNSDTKYSVRIDDGSISTPSTSAIEYSQIWYDSVLKN FT CRVNKSTLYVKAPGKHTLQIRCGDPGTVIQKIVIDMGGLKRSYLGPETTLCR" FT misc_feature 637374..637427 FT /note="Signal peptide predicted for BF0539 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.991 between residues 18 and 19" FT misc_feature 637383..637415 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 640428..641183 FT /transl_table=11 FT /locus_tag="BF9343_0516" FT /old_locus_tag="BF0540" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4719 SWALL:AAO79824 (EMBL:AE016946) (240 aa) FT fasta scores: E(): 5.3e-07, 29.43% id in 231 aa" FT /db_xref="InterPro:IPR024299" FT /db_xref="UniProtKB/TrEMBL:Q5LHT5" FT /protein_id="CAH06295.1" FT /translation="MKICSCLNKGVMIAVAVVCSASLQSCLDDNDKYYYVEGFPNALVT FT VKNATDGSFFLQLNDSTTLLPTNMSSSPFGDKEVRALVNYDEVSESGGRYDKAVQVNWI FT DSILTKSIAPDLGSENDVVYGTDPVEIVNDWVTIAEDGYLTLRFRTKWGDYNKAHFVNL FT LLGQNPSDPYEVEFRHNAYGDTYGTVGDGLVAFKLVGLPDTNGKTVPLTLKWKSFSGDK FT SAVFDYCTQKTVTPAKPAIVSVRSNLNLK" FT misc_feature 640428..640502 FT /note="Signal peptide predicted for BF0540 by SignalP 2.0 FT HMM (Signal peptide probability 0.907) with cleavage site FT probability 0.665 between residues 25 and 26" FT misc_feature 640473..640505 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(642139..642795) FT /transl_table=11 FT /locus_tag="BF9343_0517" FT /old_locus_tag="BF0541" FT /product="conserved hypthetical protein" FT /note="N-terminus is similar to Bacteroides FT thetaiotaomicron hypothetical protein BT0869 SWALL:Q8A9E6 FT (EMBL:AE016929) (115 aa) fasta scores: E(): 1.6e-15, 50% id FT in 110 aa" FT /db_xref="InterPro:IPR024311" FT /db_xref="UniProtKB/TrEMBL:Q5LHT4" FT /protein_id="CAH06296.1" FT /translation="MEIFRNLTVVLAITTLVACNDVTIEGSWVEPVPGISNLKQGFTLE FT ANGSASSINMATLKYEKWKKEGNLLLLSGISIGNHQSISFTDTLTVEQLTQDSLILKKG FT ELVLRYSKTNEIPDEEAIPTPDTPTQKLLSVKGKLIIGHETRSFTSEGDSTDYWIVDKT FT GELLQKYDGETKGIKNGTPVYVELEVIDMGKSDEGFAADYAGVYHVMKINKITVK" FT tRNA complement(643369..643445) FT /note="tRNA Met anticodon CAT, Cove score 92.99" FT CDS 643671..644057 FT /transl_table=11 FT /locus_tag="BF9343_0518" FT /old_locus_tag="BF0542" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2418 SWALL:Q8A526 (EMBL:AE016936) (128 aa) fasta FT scores: E(): 1.7e-44, 85.15% id in 128 aa" FT /db_xref="InterPro:IPR023393" FT /db_xref="UniProtKB/TrEMBL:Q5LHT3" FT /protein_id="CAH06297.1" FT /translation="MKKEKIHLEYLLNATSKNILWSAISTPTGLEDWFADKVVSDDKTV FT TFCWGKTEQRQAGIVAIRAYSFIRFHWLDDENERDYFEIKMSYNELTGDYVLEITDFSE FT ADEADDLKELWDSQVSKLRRTCGF" FT CDS 644134..646044 FT /transl_table=11 FT /locus_tag="BF9343_0519" FT /old_locus_tag="BF0543" FT /product="putative permease" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2417 SWALL:Q8A527 (EMBL:AE016936) FT (616 aa) fasta scores: E(): 7.8e-187, 72.84% id in 615 aa, FT and to Chlorobium tepidum hypothetical protein CT0740 FT SWALL:Q8KEE9 (EMBL:AE012844) (452 aa) fasta scores: E(): FT 8.5e-19, 25.66% id in 452 aa, and to Leptospira interrogans FT hypothetical protein la1106 SWALL:Q8F742 (EMBL:AE011293) FT (631 aa) fasta scores: E(): 1.8e-14, 21.7% id in 470 aa" FT /db_xref="GOA:Q5LHT2" FT /db_xref="InterPro:IPR005495" FT /db_xref="UniProtKB/TrEMBL:Q5LHT2" FT /protein_id="CAH06298.1" FT /translation="MLRIKRLDIFIIKSFLLLFVGTFFICLFIFMMQFLWKYVDELVGK FT GLEMSVLAQFFFYSALSLVPMSLPLAVLLASLITFGNFGERFELLAMKAAGISLLKIMR FT PLIVLVFAICCVSFYFQNVIGPQAQAKLGTLLISMKQKSPEVDIPEGVFYDEIDGYNLK FT VQRKDRKTGMLYDVIIYDFSNNFDNARIIVADSGRLEMTADKQHLYLHLYSGEMFENLK FT AQSMSSKNVPYRRESFREKHSIIQFDSDFNMADASIMSNQSTTKDMIKIQASIDSMTVL FT ADSIGRQYFVEASKGPYRTAVGLTKEDTLKMQEAQIRDYNVDSLFEAATLMNKQKIIAS FT AVGRTENLSSDWGFKSFTMTQNDFSIRKHKIEWHRKITISLSCLLFFFIGAPLGGIIRK FT GGLGMPVIVSVLTFIIYYIIDNTGYKMARDGKWIVWMGMWMSSAILAPLGYFLTYKSNK FT DSVVLNTDVYISWFKRVFGVRSVRHLSKKEVIIHDPDYQRLPFDLNGLSEECRAYMQKN FT RLAKAPNYFSLWMSGGQDQEIIAINSRMEALVDEMSNTRSLILLQKLEKYPIIPVNAHV FT RPFHNYWLNMAIGIVIPIGLFFYFRIWAFRIRLNKDMERIIALNRDVELTIKDINNENK FT I" FT misc_feature 644134..644244 FT /note="Signal peptide predicted for BF0543 by SignalP 2.0 FT HMM (Signal peptide probability 0.880) with cleavage site FT probability 0.647 between residues 37 and 38" FT misc_feature 644158..645498 FT /note="Pfam match to entry PF03739 YjgP_YjgQ, Predicted FT permease YjgP/YjgQ family, score 105.8, E-value 7e-29" FT misc_feature order(644170..644238,644296..644364,645262..645321, FT 645331..645390,645427..645495,645880..645948) FT /note="6 probable transmembrane helices predicted for FT BF0543 by TMHMM2.0 at aa 13-35, 55-77, 377-396, 400-419, FT 432-454 and 583-605" FT CDS 646049..647263 FT /transl_table=11 FT /gene="ribA" FT /locus_tag="BF9343_0520" FT /old_locus_tag="BF0544" FT /product="putative riboflavin biosynthesis protein FT [includes: GTP cyclohydrolase ii; 3,4-dihydroxy-2-butanone FT 4-phosphate synthase (dhbp synthase)]" FT /EC_number="3.5.4.25" FT /note="Similar to Bacillus amyloliquefaciens riboflavin FT biosynthesis protein RibA [includes: GTP cyclohydrolase II FT 3,4-dihydroxy-2-butanone 4-phosphate synthase (dhbp FT synthase)] SWALL:GCH2_BACAM (SWALL:P51695) (398 aa) fasta FT scores: E(): 2e-80, 52.76% id in 398 aa, and to Bacteroides FT thetaiotaomicron GTP cyclohydrolase II BT2416 FT SWALL:AAO77523 (EMBL:AE016936) (404 aa) fasta scores: E(): FT 3.3e-121, 76.48% id in 404 aa, and to Aquifex aeolicus FT riboflavin biosynthesis protein RibA [includes: GTP FT cyclohydrolase II 3,4-dihydroxy-2-butanone 4-phosphate FT synthase (dhbp synthase)] or AQ_350 SWALL:GCH2_AQUAE FT (SWALL:O66679) (406 aa) fasta scores: E(): 5.8e-88, 56.75% FT id in 400 aa" FT /db_xref="GOA:Q5LHT1" FT /db_xref="HSSP:1G58" FT /db_xref="InterPro:IPR000422" FT /db_xref="InterPro:IPR000926" FT /db_xref="InterPro:IPR016299" FT /db_xref="InterPro:IPR017945" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHT1" FT /protein_id="CAH06299.1" FT /translation="MEPIRLNTIEEAIADFKEGNFVIVVDDEDRENEGDFIIAAEKITP FT EKVNFMLTHGRGVLCAPITEERCAELELDMQVSSNTSIYETPFTVTVDLLEGCTTGVSM FT HDRAMTIRALADPKTKPADLGRPGHINPLRARSRGVLRRAGHTEASVDLAKLAGLYPAA FT ALIEIINEDGTMARLPQLVEVARRFGLKIISIKDLIAYRLQMESIVDRGVEVDMPTQFG FT HFRLIPFRQKSNGMEHIALIKGTWDTDEPILVRVHSSCMTGDIFGSCRCECGEQLHKAM FT EMIEAAGKGVIVYMNQEGRGIGLMNKIAAYKLQEEGYDTVDANLHLGFDADERDYGVGA FT QILREIGVKKMKLMTNNPVKRIGLEAYGLEITENVGIEIKPNPYNERYLKTKKDRMGHT FT LHFNK" FT misc_feature 646073..646660 FT /note="Pfam match to entry PF00926 DHBP_synthase, FT 3,4-dihydroxy-2-butanone 4-phosphate synthase, score 372.2, FT E-value 4.7e-109" FT misc_feature 646667..647179 FT /note="Pfam match to entry PF00925 GTP_cyclohydro2, GTP FT cyclohydrolase II, score 327.0, E-value 1.8e-95" FT CDS 647346..648539 FT /transl_table=11 FT /gene="aspC1" FT /gene_synonym="aatA1" FT /locus_tag="BF9343_0521" FT /old_locus_tag="BF0545" FT /product="putative aspartate aminotransferase" FT /EC_number="2.6.1.1" FT /note="Similar to Rhizobium leguminosarum aspartate FT aminotransferase AspC or AatA SWALL:AAT_RHILP FT (SWALL:O86459) (400 aa) fasta scores: E(): 3.4e-69, 50.76% FT id in 394 aa, and to Bacteroides thetaiotaomicron aspartate FT aminotransferase BT2415 SWALL:AAO77522 (EMBL:AE016936) (397 FT aa) fasta scores: E(): 9.3e-143, 94.45% id in 397 aa, and FT to Chlorobium tepidum aspartate aminotransferase, putative FT CT0966 SWALL:Q8KDS8 (EMBL:AE012861) (400 aa) fasta scores: FT E(): 1.1e-69, 47.95% id in 392 aa" FT /db_xref="GOA:Q5LHT0" FT /db_xref="InterPro:IPR001176" FT /db_xref="InterPro:IPR004838" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q5LHT0" FT /protein_id="CAH06300.1" FT /translation="MNQLSDRLNSLSPSATLAMSQKSAELKAQGVDVINLSVGEPDFNT FT PDHIKEAAKKAVDDNFSRYSPVPGYPALRNAIVEKLKKENGLEYTAAQISCANGAKQSV FT CNTIMVLVNPGDEVIVPAPYWVSYPEMVKLAEGTPVIVTAGIEQDFKITPAQLEAAITP FT KTKALILCSPSNPTGSVYSKEELAGLAAVLAKYPQVIVVADEIYEHINYIGKHQSIAQF FT PEMKDRTVIVNGVSKAYAMTGWRIGFIAGPEWIVKACNKLQGQYTSGPCSVSQKAAEAA FT YTGSQAPVEEMRQAFERRRDLIVKLAKEVPGFEVNVPEGAFYLFPKCSSFFGKSAGDRK FT IENSDDLAMYLLEDAHVACVGGTSFGAPECIRMSYATSDENIVEAIRRIKEALAKLK" FT misc_feature 647580..648524 FT /note="Pfam match to entry PF00155 aminotran_1_2, FT Aminotransferase class I and II, score 230.9, E-value FT 1.5e-66" FT misc_feature 648045..648086 FT /note="PS00105 Aminotransferases class-I FT pyridoxal-phosphate attachment site." FT CDS 648669..651404 FT /transl_table=11 FT /locus_tag="BF9343_0522" FT /old_locus_tag="BF0546" FT /product="putative exported rhamnosidase A" FT /note="Similar to Bacillus sp. GL1 rhamnosidase A RhaA FT SWALL:Q93RE8 (EMBL:AB046705) (886 aa) fasta scores: E(): FT 2.2e-106, 33.99% id in 906 aa, and to Bacteroides FT thetaiotaomicron putative alpha-rhamnosidase BT1013 FT SWALL:AAO76120 (EMBL:AE016930) (1290 aa) fasta scores: E(): FT 2.3e-142, 48.87% id in 892 aa, and to Streptomyces FT coelicolor hypothetical protein SCO0488 or SCF34.07 FT SWALL:Q9RK18 (EMBL:AL939105) (1138 aa) fasta scores: E(): FT 7.2e-84, 31.46% id in 804 aa" FT /db_xref="GOA:Q5LHS9" FT /db_xref="InterPro:IPR008902" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR013737" FT /db_xref="InterPro:IPR016007" FT /db_xref="UniProtKB/TrEMBL:Q5LHS9" FT /protein_id="CAH06301.1" FT /translation="MKNIFFICLFLSMSLAVSGKKAQVSISCLKTEMLVNPQNIDCPSP FT RLSWEILSDVRDVRQVSYHILVSTSLEKLNREEGDLWDTGDVASDQSAYISYGGDMLDS FT RIQCYWKVRVKTNKGISAWSEPASWEMGLLHPSDWQAVWIGRAFPQDKLEGNTRVPARY FT LRKPFNLNSKKVRKATLYICGLGFYETYINGKKIGDQVLAPTPTDYSKSVKYNRFDVTG FT QLLKGANAIGVILGNGRYTSMRMPGVRHFDVPKMIAQLEVYYEDGEKRVIASDASWKIT FT AEGPIGTNNEFDGEEYDARKEMPGWNTYPFDDTKWLQAEVVSLPGGKLEAQLNRNMKVM FT DTVKPIGITESAPGVYILDMGQNMVGWLRMKVKGQSGDTLKLRFAELLQKDGSIYTANL FT RTAHSADTYILKGNSMEEWQPTFTYHGFRFVELTGFREKPSLSDFEGQVIYDEMETTGN FT LETSDPMINRIYKNAYWGIRGNYRGMPTDCPQRDERMGWLGDRAVGSQGESYIFNNHLL FT YAKWLDDIEQAQKENGAVPDVAPNYWDVCTDNMTWPGAYLIIANMLYDQFGDKQPIIKH FT YPSMKKWMRYMKDKYMVDHIMTKDNFGDWCMPPESPELIHSKDPSRITEAAVLGTTFYY FT YLSNLMVRFAALAGYPQDAEDFRKESELVKEAFNSKYLHTELGYYSNNTVTANILSLRF FT GMVPEAYKEVVFRNIVEKTTKDFNGHVSTGLVGIQQLMRGLSDYGRTDLAYRIATNRTY FT PSWGYMVDNGATTIWELWNGNTADPAMNSANHVMLLGDLIVWAYGYLGGISNAPGSVGF FT KQIQLKPYPVDGLDFVNTSFHSIYGEVRSHWKKEDGSFCWDISVPCNTSALVYVPVADK FT SIDPKEKKRIVGEGGTFLRMEGSYAVFSFPSGSYQLKTRL" FT misc_feature 648669..648725 FT /note="Signal peptide predicted for BF0546 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.623 between residues 19 and 20" FT CDS complement(651399..651641) FT /transl_table=11 FT /locus_tag="BF9343_0523" FT /old_locus_tag="BF0547" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHS8" FT /protein_id="CAH06302.1" FT /translation="MKIVLLAELVLTSVRLALSLKVIFTQLILSSVQIVVLAQMYVLLK FT QFTQLNNTIPNKKDKGCLPNGKQPLFISFQTFGKL" FT misc_feature complement(651510..651578) FT /note="1 probable transmembrane helix predicted for BF0547 FT by TMHMM2.0 at aa 22-44" FT CDS 651817..652734 FT /transl_table=11 FT /gene="metA" FT /locus_tag="BF9343_0524" FT /old_locus_tag="BF0548" FT /product="putative homoserine O-succinyltransferase" FT /EC_number="2.3.1.46" FT /note="Similar to Escherichia coli homoserine FT O-succinyltransferase MetA or B4013 SWALL:META_ECOLI FT (SWALL:P07623) (308 aa) fasta scores: E(): 2.8e-62, 46.86% FT id in 303 aa, and to Bacteroides thetaiotaomicron FT homoserine O-succinyltransferase BT2413 SWALL:AAO77520 FT (EMBL:AE016935) (305 aa) fasta scores: E(): 7.1e-117, FT 90.13% id in 304 aa, and to Clostridium acetobutylicum FT homoserine O-succinyltransferase MetA or CAC1825 FT SWALL:META_CLOAB (SWALL:Q97I29) (301 aa) fasta scores: E(): FT 1.2e-77, 57.8% id in 301 aa" FT /db_xref="GOA:Q5LHS7" FT /db_xref="HSSP:2GHR" FT /db_xref="InterPro:IPR005697" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHS7" FT /protein_id="CAH06303.1" FT /translation="MPLNLPDKLPAIELLKEENIFVIDNSRATQQDIRPLRIVILNLMP FT LKITTETDLVRLLSNTPLQVEISFMKIKSHTSKNTPIEHMKTFYTDFDKMREDRYDGMI FT ITGAPVEQMEFEEVNYWDEITEIFDWARTHVTSTLYICWAAQAGLYHHYGIPKYALDKK FT MFGIFKHRTLLPLHPIFRGFDDEFYVPHSRHTEVRKEDILKVPELTLLSESDDSGVYMV FT VARGGREFFVTGHSEYSPLTLDTEYRRDVSKGLPIEIPRNYYVNDDPDKGPLVRWRGHA FT NLLFSNWLNYFVYQETPYNIEDIR" FT misc_feature 651817..652719 FT /note="Pfam match to entry PF04204 HTS, Homoserine FT O-succinyltransferase, score 678.6, E-value 2.7e-201" FT CDS 652731..654557 FT /transl_table=11 FT /locus_tag="BF9343_0525" FT /old_locus_tag="BF0549" FT /product="putative protease" FT /note="Similar to Porphyromonas gingivalis peptidase PrtQ FT protein SWALL:Q9ZNF7 (EMBL:AB016085) (635 aa) fasta scores: FT E(): 2.4e-72, 50.4% id in 621 aa, and to Bacteroides FT thetaiotaomicron putative collagenase BT2412 SWALL:AAO77519 FT (EMBL:AE016935) (609 aa) fasta scores: E(): 8.8e-213, FT 84.84% id in 607 aa, and to Escherichia coli putative FT protease YdcP precursor or B1435 SWALL:YDCP_ECOLI FT (SWALL:P76104) (653 aa) fasta scores: E(): 3.5e-82, 46.69% FT id in 621 aa" FT /db_xref="GOA:Q5LHS6" FT /db_xref="InterPro:IPR001539" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR020988" FT /db_xref="UniProtKB/TrEMBL:Q5LHS6" FT /protein_id="CAH06304.1" FT /translation="MIKQRKIELLAPAKNLECGIAAIDHGADAVYIGAPKFGARAAAVN FT SLEDIAALVEYAHLYNARIYVTVNTILKDEELQETEKMIWALFRAGVDALIVQDMGITG FT LNLPPIPLHASTQMDNRTVEKVRFLADAGFRQVVLARELSLREISKIHEACPDVPLEIF FT VHGALCVSYSGQCYVSQACFGRSANRGECAQFCRLPFSLVDAEGRVIVKDKHLLSLKDL FT NQSDELEALLDAGASSFKIEGRLKDVSYVKNVTAAYRRKLDAIFARRKEYARASSGSCR FT YAFNPQLDKSFSRGFTHYYLHGRTKDVFSFDTPKSLGEEMGTMKEARGNYLTVAGLKSF FT NNGDGVCYIDEQGRLQGFRINRVEGNKLYPQEMPRIKPRTVLYRNFDQEFEKILARKSS FT ERRIAVSVRLTDTPFGFALTLTDEDDNSVTLSLAREKEPARTPQEENLKTQLAKFGNTP FT FEAVRIDIDFAGNWFLPASVLADFRRQAVEKLISARRINYRRELFVLKPTAHAFPQSTL FT TYLGNVMNAQAVSFYAGHGVASIAPAFERAPAEKAVLMFCKHCLRYSMGWCPVHQRERS FT PYREPYYLVSTDGKRFRLEFDCKNCQMKVNAV" FT misc_feature 652959..653651 FT /note="Pfam match to entry PF01136 Peptidase_U32, Peptidase FT family U32, score 325.2, E-value 6.3e-95" FT misc_feature 653211..653267 FT /note="PS01276 Peptidase family U32 signature." FT CDS 654554..655528 FT /transl_table=11 FT /locus_tag="BF9343_0526" FT /old_locus_tag="BF0550" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2411 SWALL:AAO77518 (EMBL:AE016935) (344 aa) FT fasta scores: E(): 2e-101, 77.16% id in 324 aa" FT /db_xref="GOA:Q5LHS5" FT /db_xref="UniProtKB/TrEMBL:Q5LHS5" FT /protein_id="CAH06305.1" FT /translation="MREKVRFCVALCCSVVMVLLASCRYSLPDLPAEGMSRKTKDSLTY FT LSKYHYTWNTNLEVLDDSVRLEYLPLKDAYVNLYKGDRVVVAEFSVHPQDSVDSIWVKV FT AHSQEVQGWVRNKELVRSFVPTDSISQFIHLFSDTHASYFVFIFALFVGVYLLRAFMKK FT RLQMVYFNDIDSVYPLFLCLLMAFSATVYETMQVFVPDTWEHFYFNPTLSPFKVPFILS FT VFLTGIWLFIIVTLAVLDDLFRQLTPAAAVFYLLGLMSCCIFCYFFFILTTHIYIGYFF FT LACFIWLFVKKVRRGSGYKYRCGNCGQKLREKGQCPHCGAVNE" FT misc_feature 654554..654631 FT /note="Signal peptide predicted for BF0550 by SignalP 2.0 FT HMM (Signal peptide probability 0.926) with cleavage site FT probability 0.658 between residues 26 and 27" FT misc_feature order(654572..654637,654971..655039,655076..655144, FT 655202..655270,655307..655366,655376..655423) FT /note="6 probable transmembrane helices predicted for FT BF0550 by TMHMM2.0 at aa 7-28, 140-162, 175-197, 217-239, FT 252-271 and 275-290" FT misc_feature 654590..654622 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(655682..658069) FT /transl_table=11 FT /locus_tag="BF9343_0527" FT /old_locus_tag="BF0551" FT /product="putative TonB dependent receptor" FT /note="Similar to Pseudomonas fluorescens quinolobactin FT receptor QbsI SWALL:AAL65282 (EMBL:AY072690) (669 aa) fasta FT scores: E(): 3.5e-15, 23.44% id in 789 aa, and to FT Bacteroides thetaiotaomicron putative TonB-dependent outer FT membrane protein BT2409 SWALL:AAO77516 (EMBL:AE016935) (799 FT aa) fasta scores: E(): 7.3e-101, 64.93% id in 810 aa, and FT to Anabaena sp. hypothetical protein ALL4026 SWALL:Q8YQ14 FT (EMBL:AP003595) (854 aa) fasta scores: E(): 5.2e-19, 24.55% FT id in 782 aa" FT /db_xref="GOA:Q5LHS4" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:Q5LHS4" FT /protein_id="CAH06306.1" FT /translation="MKKNSILIALALFSAGGTWAEELPKDTLKVIDVEEIVVIAAPKEN FT RKLREQPTAVTMLSQQDMQANQVNSIKSLTALVPNIFIPDYGSKLTSAIYIRGIGSRIN FT TPSVGLYVDNVPYIDKSAFDFNYADIERIDVLRGPQGTLYGRNTMGGLIKVHTKSPFSY FT QGTDLRLSAGTYDNYNASVTHYHRMSNQFAFSTGAFYEYGGGFFKNTYLNKKIDKSQAA FT GGRFRGIYLPSENMKLDLNVSYEYSDQGGYAYGAYDKHTGTYLKPAYNDPSSYYRNLLN FT AGLNLEYQGDHFTLSSVTGLQHLRDRMFIDQDFSPANIYVLEQKQKLTTISEEIVLKSK FT SGRRWEWTTGAFGFYQWLTTNGPVTFKEDGVTEMLEKGINSHFPDLSAMGMKMNLNITN FT PTLLVDGRFHTPILSGAVYHQSTFRDLLIEGLSATVGLRLDYEKNWMKYNSGSTIDYQF FT NMTSPFMPVRLEQTSSPRLNGKFSNDYLQLLPKFALQYEWKKGNNVYATVSRGYRSGGY FT NIQMFSDLIQGNMQNDMQGQIKAGTKQIFDRLVTQGMPQAIADRILSNIPDAGENADPK FT ASTIYKPEYSWNYEVGSHLTLWEGKLWMDLAAFLMDTRDQQIAQFAKSGLGRITVNAGK FT SRSYGAEAALRANLTDALSMNASYGYTYATFTDYKTIDRGQNEISYDGNYVPFVPKHTL FT NVGGQYIFRIAPRHWLDHVQVNVNYNGAGRIYWTEQNDVSQSFYGTLNGRVSLAKGNGQ FT IDFWVRNALDKKYATFYFESMGNGFMQKGRPVHFGVDIRCRF" FT misc_feature complement(655685..657925) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 157.3, E-value 2.3e-44" FT misc_feature complement(658010..658069) FT /note="Signal peptide predicted for BF0551 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 1.000 between residues 20 and 21" FT CDS complement(658180..658779) FT /transl_table=11 FT /locus_tag="BF9343_0528" FT /old_locus_tag="BF0552" FT /product="putative LuxR family transcriptional regulator" FT /note="Similar to Bacteroides thetaiotaomicron LuxR family FT transcriptional regulator BT2408 SWALL:AAO77515 FT (EMBL:AE016935) (200 aa) fasta scores: E(): 2.6e-62, 85% id FT in 200 aa, and to Bacteroides thetaiotaomicron FT transcriptional regulator BT0520 SWALL:AAO75627 FT (EMBL:AE016928) (203 aa) fasta scores: E(): 7.8e-08, 30.69% FT id in 202 aa, and to Brucella melitensis transcriptional FT regulatory protein DegU Bmei1582 SWALL:Q8YFE0 FT (EMBL:AE009594) (213 aa) fasta scores: E(): 1.4e-05, 60.34% FT id in 58 aa" FT /db_xref="GOA:Q5LHS3" FT /db_xref="InterPro:IPR000792" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR016032" FT /db_xref="UniProtKB/TrEMBL:Q5LHS3" FT /protein_id="CAH06307.1" FT /translation="MMNHQPEIAIVEANTLTSLGLKTILERMIPMAVIRTFHSFGELTD FT DTPDMYAHYFISAQIYVEHNAFFLPRKRKTIVLAGDSHQFQLSGVPILNIYQAEEQLVK FT DILKLHQHAHHDGYPVKDMPPTPPTTGHELSAREIEVLVLITKGLINKEIADKLNIGLT FT TVITHRKNITEKLGIKSVSGLTIYAVMNGYVEADRI" FT misc_feature complement(658192..658389) FT /note="Pfam match to entry PF00196 GerE, Bacterial FT regulatory proteins, luxR family, score 71.3, E-value FT 1.8e-18" FT misc_feature complement(658255..658338) FT /note="PS00622 Bacterial regulatory proteins, luxR family FT signature." FT CDS complement(658784..660373) FT /transl_table=11 FT /locus_tag="BF9343_0529" FT /old_locus_tag="BF0553" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron FT NAD-utilizing dehydrogenases BT2407 SWALL:AAO77514 FT (EMBL:AE016935) (549 aa) fasta scores: E(): 5e-125, 84.85% FT id in 548 aa, and to Leptospira interrogans uncharacterized FT FAD-dependent dehydrogenase LB089 SWALL:Q8EXW8 FT (EMBL:AE011597) (518 aa) fasta scores: E(): 4.8e-65, 50.75% FT id in 528 aa, and to Clostridium acetobutylicum FT uncharacterized FAD-dependent dehydrogenase CAC3077 FT SWALL:Q97EN3 (EMBL:AE007804) (540 aa) fasta scores: E(): FT 9.8e-59, 37.14% id in 533 aa" FT /db_xref="InterPro:IPR002938" FT /db_xref="UniProtKB/TrEMBL:Q5LHS2" FT /protein_id="CAH06308.1" FT /translation="MIQEYQLRILPEIAASEQQLKAYLSQEKGLNQRDITALRTLKRSI FT DARQRTIYVNLKVRVYLNEMPKDDEYEHTIYNNVEGKPQVIVVGAGPGGLFAALRLIEL FT GLRPVVVERGKDVRERKKDLAQISREHRVDPESNYSFGEGGAGAYSDGKLYTRSKKRGN FT VDKILNVFCQHGASTAILVDAHPHIGTDKLPRVIENMRNTIIECGGEVHFKTRMDALII FT EQGEVKGIETNTGETFLGPVILATGHSARDVYRWLAANNVTIEAKGIAVGVRLEHPAGL FT IDQIQYHNRSGRGKYLPAAEYSFVTQVDGRGVYSFCMCPGGFIVPAASGPEQVVVNGMS FT PSNRGSRWSNSGMVVEIQPEDIINDKRLTVNNEAEETFPELAVLHFQEELERQCWLQGG FT RRQTAPAQRMVDFTRKKLSYDLPESSYSPGLISSPLHFWMPEFIAGRLSQGFQQFGRSS FT HGFLTNEAVMIGVETRTSSPVRIVRDKDTLQHITLRGLFPCGEGAGYAGGIVSAGIDGE FT RCAEAVAQFMNP" FT CDS complement(660418..660789) FT /transl_table=11 FT /locus_tag="BF9343_0530" FT /old_locus_tag="BF0554" FT /product="conserved hypothetical protein" FT /note="Similar to Anabaena sp. hypothetical protein ALL3669 FT SWALL:Q8YQZ1 (EMBL:AP003593) (130 aa) fasta scores: E(): FT 4.1e-24, 56.8% id in 125 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHS1" FT /protein_id="CAH06309.1" FT /translation="MEINELTGLILKKAYEVHTVLGPGLLESAYEECLCYELIQCGLNV FT EKQKALPVVYKNIKVDAGYRLDIVVNNAVIIEIKAVEELHPVHTAQLITYLKLSGIKYG FT LLINFNVRSLKEGIRRYIV" FT CDS complement(660845..662212) FT /transl_table=11 FT /gene="radA" FT /locus_tag="BF9343_0531" FT /old_locus_tag="BF0555" FT /product="putative DNA repair protein" FT /note="Similar to Staphylococcus epidermidis RadA protein FT se0288 SWALL:Q8CQ87 (EMBL:AE016744) (457 aa) fasta scores: FT E(): 3.4e-80, 50.22% id in 452 aa, and to Bacteroides FT thetaiotaomicron putative DNA repair protein BT2406 FT SWALL:AAO77513 (EMBL:AE016935) (455 aa) fasta scores: E(): FT 6e-156, 94.28% id in 455 aa, and to Bacillus subtilis DNA FT repair protein RadA homolog or Sms SWALL:RADA_BACSU FT (SWALL:P37572) (458 aa) fasta scores: E(): 1.8e-86, 51.63% FT id in 459 aa" FT /db_xref="GOA:Q5LHS0" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004504" FT /db_xref="InterPro:IPR008269" FT /db_xref="InterPro:IPR014774" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:Q5LHS0" FT /protein_id="CAH06310.1" FT /translation="MAKEKTVYVCSNCGQESPKWVGKCPSCGEWNTYVEEIVRKEVPNK FT RPVSGIESPKAKPVTLSEIEADEEPRIDMHDEELNRVLGGGLVPGSLVLIGGEPGIGKS FT TLVLQTVLHMPERRILYISGEESARQLKLRADRLTRTSSDCLIVCETSLEQIYVHIKNT FT RPDLVIIDSIQTISTESIESSPGSIAQVRECSASILRFAKETHTPVLLIGHINKEGSIA FT GPKVLEHIVDTVLQFEGDQHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVSNPSELL FT LSQDHEGMSGVAIASAIEGVRPFLIETQALVSSAVYGNPQRSATGFDIRRMNMLLAVLE FT KRVGFKLAQKDVFLNIAGGLKVNDPAIDLAVISAILSSNMDAAIEPEVCMAGEIGLSGE FT IRPVNRIEQRIGEAEKLGFKRFILPKYNMQGIDTKKLRIELVPVRKVEEAFRTLFG" FT misc_feature complement(661901..661924) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(662870..663895) FT /transl_table=11 FT /locus_tag="BF9343_0532" FT /old_locus_tag="BF0556" FT /product="putative L-asparaginase I" FT /EC_number="3.5.1.1" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 L-asparaginase I AnsA or B1767 or Z2801 or ECS2474 FT SWALL:ASG1_ECOLI (SWALL:P18840) (338 aa) fasta scores: E(): FT 7.8e-52, 45.58% id in 340 aa, and to Bacteroides FT thetaiotaomicron L-asparaginase I BT2404 SWALL:Q8A540 FT (EMBL:AE016935) (327 aa) fasta scores: E(): 1.7e-108, FT 81.65% id in 327 aa. Possible alternative start site at FT codon 11. Note: Also similar to BF2680 (349 aa) fasta FT scores: E(): 6.2e-97, 68.605% identity in 344 aa overlap" FT /db_xref="GOA:Q5LHR9" FT /db_xref="InterPro:IPR006033" FT /db_xref="InterPro:IPR006034" FT /db_xref="InterPro:IPR020827" FT /db_xref="UniProtKB/TrEMBL:Q5LHR9" FT /protein_id="CAH06311.1" FT /translation="MLIYTGGTIGMIENPETGALENFNFEQLQKHVPELQKFTFPIDSY FT QFDPPMDSSDMEPEAWRKLVHVISEHYHQYTGFVILHGTDTMAFTASALSFMLEGLDKP FT VILTGSQLPIGVLRTDGKENLMTSIEIASARDRSGNPMVPEVCIFFENRLMRGNRTTKM FT SAENFNAFRSFNYPVLAEAGIHIKYNNVQIHIEGEKRELHPHYLLDTNIAILKLFPGIQ FT ENVVAATLAIEGLKAVVLETYGSGNASRKEWFLRRLRDASERGVVIVNVTQCSAGTVEM FT ERYETGYHLLKAGIVSGHDSTTESAVTKLMFLLGHGYSPDEVRRRMNESMAGEISIDLS FT K" FT misc_feature complement(662921..663886) FT /note="Pfam match to entry PF00710 Asparaginase, FT Asparaginase, score 187.5, E-value 1.9e-53" FT misc_feature complement(663635..663667) FT /note="PS00917 Asparaginase / glutaminase active site FT signature 2." FT misc_feature complement(663866..663892) FT /note="PS00144 Asparaginase / glutaminase active site FT signature 1." FT CDS 664413..666848 FT /transl_table=11 FT /gene="thrA" FT /locus_tag="BF9343_0533" FT /old_locus_tag="BF0558" FT /product="putative aspartokinase I-homoserine FT dehydrogenase" FT /EC_number="1.1.1.3" FT /note="Similar to Escherichia coli aspartokinase FT I-homoserine dehydrogenase I ThrA SWALL:Q8RMX0 FT (EMBL:AF487900) (820 aa) fasta scores: E(): 3.6e-92, 36.79% FT id in 818 aa, and to Bacteroides thetaiotaomicron FT aspartokinase/homoserine dehydrogenase BT2403 FT SWALL:AAO77510 (EMBL:AE016935) (811 aa) fasta scores: E(): FT 0, 90.25% id in 811 aa, and to Chlorobium tepidum FT aspartokinase/homoserine dehydrogenase CT2030 SWALL:Q8KAX1 FT (EMBL:AE012953) (818 aa) fasta scores: E(): 7.8e-115, FT 42.77% id in 823 aa" FT /db_xref="GOA:Q5LHR8" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR001341" FT /db_xref="InterPro:IPR001342" FT /db_xref="InterPro:IPR002912" FT /db_xref="InterPro:IPR005106" FT /db_xref="InterPro:IPR011147" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR018042" FT /db_xref="UniProtKB/TrEMBL:Q5LHR8" FT /protein_id="CAH06312.1" FT /translation="MKVMKFGGTSVGSVNSILSVKKIVESAGEPVIVVVSALGGITDQL FT ISTSRMAAMGDAAYEGAYREIVRRHEEMVQGVIPAGETQTLLHYQVNELLDELKDIFQG FT IYLIKDLSPKTSDTIVSYGERLSSLIASRLIQGAVWFDSRTFIKTEKKHNKHTLDTELT FT NRLVREAFKEIPRVSLVPGFISSDKVSGDVTNLGRGGSDYTAAVIAAALDADSLEIWTD FT VDGFMTADPRVISTAYTISELTYVEATELCNFGAKVVYPPTIYPVCHKNIPILIKNTFN FT PDAQGTVIKQHVDHTKSKAIKGISSINDTSLITVQGLGMVGVIGVNYRIFKALAKNGIS FT VFLVSQASSENSTSIGVRNADADLACEVLNEEFAKEIEMGEISPIQAEKNLATVAIVGE FT NMKHTPGIAGKLFGTLGRNGINVIACAQGASETNISFVVDSKSLRKSLNVIHDSFFLSE FT YQVLNLFICGVGTVGGSLVEQIRQQQKKLMVENGLKLHVVGIIDATKAMFSRAGFDLAN FT YREELKEKGVDSSLDTIRDEIIGMNIFNSVFVDCTASPDIASLYKDFLQHNISVVAANK FT IAASSAYENYRELKLIARQRGVKYLFETNVGAGLPIINTINDLIHSGDKILKIEAVLSG FT TLNYIFNKISADVPFSRTIKMAQEERYSEPDPRIDLSGKDVIRKLVILAREAGYKLEQE FT DVEKNLFVPNDFFEGSLEDFWKKVPSLDADFEARRKVLESENKHWRFVAKLENGKASVG FT LQEVDRNHPFYGLEGSNNIILLTTERYKEYPMMIQGYGAGAGVTAAGVFADIMSIANV" FT misc_feature 664413..665246 FT /note="Pfam match to entry PF00696 aakinase, Amino acid FT kinase family, score 116.4, E-value 4.6e-32" FT misc_feature 664419..664445 FT /note="PS00324 Aspartokinase signature." FT misc_feature 665343..665567 FT /note="Pfam match to entry PF01842 ACT, ACT domain, score FT 18.9, E-value 0.01" FT misc_feature 665586..665786 FT /note="Pfam match to entry PF01842 ACT, ACT domain, score FT 36.1, E-value 6.7e-08" FT misc_feature 665835..666239 FT /note="Pfam match to entry PF03447 NAD_binding_3, FT Homoserine dehydrogenase, NAD binding domain, score 52.1, FT E-value 1.1e-12" FT misc_feature 666243..666830 FT /note="Pfam match to entry PF00742 Homoserine_dh, FT Homoserine dehydrogenase, score 225.1, E-value 9e-65" FT CDS 666860..668071 FT /transl_table=11 FT /locus_tag="BF9343_0534" FT /old_locus_tag="BF0559" FT /product="putative phosphoglycerate mutase" FT /note="Similar to Methanococcus jannaschii FT 2,3-bisphosphoglycerate-independent phosphoglycerate mutase FT 2 ApgM2 or Mj0010 SWALL:APG2_METJA (SWALL:Q60326) (428 aa) FT fasta scores: E(): 1.9e-13, 26.31% id in 418 aa, and to FT Bacteroides thetaiotaomicron phosphoglycerate mutase BT2402 FT SWALL:AAO77509 (EMBL:AE016935) (407 aa) fasta scores: E(): FT 1e-147, 90.07% id in 403 aa, and to Methanosarcina mazei FT 2,3-bisphosphoglycerate-independent phosphoglycerate mutase FT ApgM or Mm1418 SWALL:APGM_METMA (SWALL:Q8PX04) (397 aa) FT fasta scores: E(): 6.2e-73, 50.25% id in 400 aa" FT /db_xref="GOA:Q5LHR7" FT /db_xref="InterPro:IPR004456" FT /db_xref="InterPro:IPR006124" FT /db_xref="InterPro:IPR013371" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:Q5LHR7" FT /protein_id="CAH06313.1" FT /translation="MKHIIILGDGMADWAVKSLGDKTLLQYAKTPYMDKLARMGRNGRL FT ITVADGFHPGSEVANMSVLGYNLPKVYEGRGPLEAASIGVDLQPGEMAMRCNLICTEGD FT ILKNHSAGHITTEEADVLIQYLQEKLGDDRVRFHTGVQYRHLLVVKGGNKQLDCTPPHD FT VPLKPFRPLMVKPLVPEAEETASLLNELILKSQELLKDHPLNLKRMAEGKDPANSIWPW FT SPGYRPQMERLSDTFPQVKRGAVISAVDLINGIGYYAGLRRIAVEGATGLYDTNYENKV FT AAALEALKTDDFVYLHIEASDEAGHEGDVALKLKTIENLDSRAVGPIYEAVKEWEEPVA FT IAVLPDHPTPCELRTHTNEPVPFFIWYPGIEPDSVQTFDEVAAVEGSYGLLKEDEFIKE FT FMNR" FT misc_feature 667673..668005 FT /note="Pfam match to entry PF01676 Metalloenzyme, FT Metalloenzyme superfamily, score 97.4, E-value 2.3e-26" FT CDS 668218..669519 FT /transl_table=11 FT /gene="thrC" FT /locus_tag="BF9343_0535" FT /old_locus_tag="BF0560" FT /product="putative threonine synthase" FT /EC_number="4.2.3.1" FT /note="Similar to Escherichia coli threonine synthase ThrC FT or B0004 SWALL:THRC_ECOLI (SWALL:P00934) (428 aa) fasta FT scores: E(): 3.5e-67, 44.34% id in 433 aa, and to FT Bacteroides thetaiotaomicron threonine synthase BT2401 FT SWALL:AAO77508 (EMBL:AE016935) (433 aa) fasta scores: E(): FT 3.3e-150, 88.63% id in 431 aa, and to Chlorobium tepidum FT threonine synthase ThrC or CT2035 SWALL:Q8KAW6 FT (EMBL:AE012953) (441 aa) fasta scores: E(): 6.6e-73, 45.39% FT id in 434 aa" FT /db_xref="GOA:Q5LHR6" FT /db_xref="InterPro:IPR000634" FT /db_xref="InterPro:IPR001926" FT /db_xref="InterPro:IPR004450" FT /db_xref="UniProtKB/TrEMBL:Q5LHR6" FT /protein_id="CAH06314.1" FT /translation="MKYYSTNKQAPLASLEEAVVKGLASDKGLFMPMTIKPLPQEFYDE FT IENLSFREIAYRVADAFFGEDVPAETLKEIVYDTLNFDVPLVPVKENIYSLELFHGPTL FT AFKDVGGRFMARLLGYFIRKEGRKQVNVLVATSGDTGSAVANGFLGVEGIHVYVLYPKG FT KVSEIQEKQFTTLGRNITALEVDGTFDDCQALVKAAFMDQELNEQLLLTSANSINVARF FT LPQAFYYFYAYAQLKKAGRAENVVICVPSGNFGNITAGLFGKKMGLPVRRFIAANNKND FT IFYQYLQTGQYNPRPSVATIANAMDVGDPSNFARVLDLYGGSHAAIAAEISGTTYTDEQ FT IRESVKACWQQTGYLLDPHGACGYRALEEGLQPGETGVFLETAHPAKFLQTVESIIGTE FT VEIPAKLRAFMKGEKKSLPMTKEFADFKSYLLGK" FT misc_feature 668446..669369 FT /note="Pfam match to entry PF00291 PALP, FT Pyridoxal-phosphate dependent enzyme, score 90.5, E-value FT 2.8e-24" FT misc_feature 668506..668550 FT /note="PS00165 Serine/threonine dehydratases FT pyridoxal-phosphate attachment site." FT CDS 669607..669819 FT /transl_table=11 FT /locus_tag="BF9343_0536" FT /old_locus_tag="BF0561" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHR5" FT /protein_id="CAH06315.1" FT /translation="MLFPQPAALFPDGDADGKLFVKTVSEILLGGSGGTFLKNSRHFFC FT LQASPVSLPPARGFSSFRMRVKVCF" FT CDS 669932..670882 FT /transl_table=11 FT /locus_tag="BF9343_0537" FT /old_locus_tag="BF0562" FT /product="putative transmembrane protein" FT /note="Similar to Proteus vulgaris Orf84 protein FT SWALL:Q8L2B6 (EMBL:AP004237) (267 aa) fasta scores: E(): FT 6e-06, 23.45% id in 243 aa, and to Bacteroides FT thetaiotaomicron putative permease BT2567 SWALL:AAO77674 FT (EMBL:AE016936) (306 aa) fasta scores: E(): 3.9e-84, 72.57% FT id in 299 aa, and to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4051 SWALL:AAO79156 (EMBL:AE016943) FT (305 aa) fasta scores: E(): 9.2e-22, 31% id in 300 aa" FT /db_xref="GOA:Q5LHR4" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q5LHR4" FT /protein_id="CAH06316.1" FT /translation="MMKNKKVEANLSMVVSKTFSGLNMNALKYLLPVWVSPLSGVTLRC FT VFAAIAFWIIGMFVKPEISTRKEKIFLFLLGALGIYGFMFLYLMGLSKTTPVSSSIFTS FT LQPIWVFVIAVVFFKEKISAMKIAGISLGLGGAILCILAQKSDDLASDALTGNMLCLLS FT SIAYAVYLVASNRILKSVGMFTVLKYTFAGAAFSSIVVSAVTGFHAPVFSGPLHWFPLS FT VLLFVLIFPTVVSYLLVPIGLKYLKTTVVAIYGYLILIVATIVSLLVGQDRFSWSQTIA FT IGMICVSVYLVEVAETKEKPVSNSDKPSSLPPHGS" FT misc_feature 669983..670357 FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 76.7, E-value 4.2e-20" FT misc_feature order(670031..670099,670136..670204,670232..670285, FT 670304..670360,670388..670447,670481..670549, FT 670592..670660,670679..670738,670751..670807) FT /note="9 probable transmembrane helices predicted for FT BF0562 by TMHMM2.0 at aa 34-56, 69-91, 101-118, 125-143, FT 153-172, 184-206, 221-243, 250-269 and 274-292" FT misc_feature 670424..670813 FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 44.7, E-value 1.8e-10" FT misc_feature 670541..670588 FT /note="PS00225 Crystallins beta and gamma 'Greek key' motif FT signature." FT CDS complement(670836..671459) FT /transl_table=11 FT /locus_tag="BF9343_0538" FT /old_locus_tag="BF0563" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2397 SWALL:AAO77504 (EMBL:AE016935) FT (207 aa) fasta scores: E(): 1.3e-50, 65.65% id in 198 aa, FT and to Helicobacter pylori J99 putative Jhp1211 FT SWALL:Q9ZJT7 (EMBL:AE001547) (204 aa) fasta scores: E(): FT 1.5e-17, 34.14% id in 205 aa, and to Helicobacter pylori FT hypothetical protein Hp1291 SWALL:O25878 (EMBL:AE000633) FT (204 aa) fasta scores: E(): 3e-17, 33.17% id in 205 aa" FT /db_xref="GOA:Q5LHR3" FT /db_xref="InterPro:IPR006282" FT /db_xref="InterPro:IPR007371" FT /db_xref="UniProtKB/TrEMBL:Q5LHR3" FT /protein_id="CAH06317.1" FT /translation="MKVNDIDMDAVILGNGEYPTHSMPETMLIMAPYVVCCDGSADEHI FT RRGFTPDAIIGDGDSLSPDNKERFRTIFHQIDDQETNDQTKAVHFLLDQGKKTIILVGA FT TGKREDHTLGNISLLIDYMKAGAQVTMLTDHGMFIPASGRNCFKSYPGQQISIFNFNAT FT GLRADGLVYPLSDFSNWWQGTLNEATGTEFTIHAEGDYLVYLNY" FT misc_feature complement(671058..671417) FT /note="Pfam match to entry PF04263 TPK_catalytic, Thiamin FT pyrophosphokinase, catalytic domain, score 71.5, E-value FT 1.5e-18" FT CDS complement(671446..672018) FT /transl_table=11 FT /locus_tag="BF9343_0539" FT /old_locus_tag="BF0564" FT /product="putative nicotinamide mononucleotide transporter" FT /note="Similar to Escherichia coli, and Shigella flexneri FT protein PnuC or B0751 or SF0553 or S0561 SWALL:PNUC_ECOLI FT (SWALL:P31215) (239 aa) fasta scores: E(): 1.1e-05, 25.36% FT id in 205 aa, and to Bacteroides thetaiotaomicron putative FT membrane transporter involved in nicotinamide FT mononucleotide transport BT2396 SWALL:AAO77503 FT (EMBL:AE016935) (188 aa) fasta scores: E(): 5.7e-62, 78.3% FT id in 189 aa, and to Pseudomonas syringae nicotinamide FT mononucleotide transporter PnuC, putative PSPTO3142 FT SWALL:AAO56629 (EMBL:AE016867) (187 aa) fasta scores: E(): FT 1.8e-20, 34.4% id in 186 aa" FT /db_xref="GOA:Q5LHR2" FT /db_xref="InterPro:IPR006419" FT /db_xref="UniProtKB/TrEMBL:Q5LHR2" FT /protein_id="CAH06318.1" FT /translation="MNYLEITGALVGLIYLWLEYRASIYLWIAGIIMPAIYIFVYYQAG FT LYADFGINIYYLLAAAYGWMVWMRGSEKETRAELPITHTPLKRYLPLLLVFLAAFFGIA FT WILIRFTDSNVPWLDSFTTALSIIGMWMLARKYVEQWWAWIVVDVVCCGLYIYKELYFT FT SALYGLYSIIAIFGYFKWKQMMHYESK" FT misc_feature complement(order(671482..671538,671548..671598, FT 671617..671676,671686..671754,671815..671883, FT 671893..671961)) FT /note="6 probable transmembrane helices predicted for FT BF0564 by TMHMM2.0 at aa 20-42, 46-68, 89-111, 115-134, FT 141-157 and 161-179" FT misc_feature complement(671569..672018) FT /note="Pfam match to entry PF04973 NMN_transporter, FT Nicotinamide mononucleotide transporter, score 38.6, FT E-value 1.2e-08" FT CDS complement(672022..674241) FT /transl_table=11 FT /locus_tag="BF9343_0540" FT /old_locus_tag="BF0565" FT /product="putative TonB-dependent transmembrane receptor FT protein" FT /note="Similar to Vibrio anguillarum HupA protein FT SWALL:Q9AJS1 (EMBL:AJ306289) (716 aa) fasta scores: E(): FT 2.1e-09, 21.49% id in 749 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT2390 FT SWALL:AAO77497 (EMBL:AE016935) (743 aa) fasta scores: E(): FT 0, 73.42% id in 745 aa, and to Porphyromonas gingivalis FT hypothetical TonB-linked outer membrane receptor PG47 FT SWALL:Q9KIB1 (EMBL:AF237557) (867 aa) fasta scores: E(): FT 5.4e-13, 22.05% id in 739 aa" FT /db_xref="GOA:Q5LHR1" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:Q5LHR1" FT /protein_id="CAH06319.1" FT /translation="MKKMIFAGCLMAGASVFAQAGETDSLKVVNLQEVQIVSTRATSKT FT PVAFTNVSKEELKKQNFGQDIPFLLSMTPSALTTSDAGAGIGYTTLRVRGTDGTRINIT FT ANGIPMNDAESHTLFWVNMPDFASSVKDIQVQRGAGTSTNGAGAFGASVNMQTEGISMQ FT PYAEINASYGSFNAHKETVKFGTGLLKDHWAFDARLSNIGTDGYIDRASVDLYSFYAQG FT GYFADNTSVKFITFGGKEKTYHAWNYATKEEMKKYGRRFNSCGMYTDDDGHIRFYKDQT FT DNYLQMNYQLLLNHTFSAAWNLNAALHYTKGDGYYQEYKEDRSLKEYRLHPFMYDGKEV FT EKSDLIRQKKMDNHFGGGVFSVNYRNEKLDASLGGALNYYDGWHFGRVIWVKNYIGELL FT PDHEYYRNKAKKTDGNLYLKANYNLVAGLNAYADLQYRYINYKIHGDNDKYDYNTDGLQ FT KLAVNDHFNFFNPKAGLNWDIDSNNRVYASFSVAQKEPTRNNYTDGNADEYPKAEKLYD FT YELGYTYRNTWLSAGVNFYYMDYKDQLVLTGELNEIGEAMARNVPDSYRTGVELMLGVK FT PCRWFQWDINGTLSKNRVKNFTEKLYEDEWKNPIEVEHGNTPIAFSPDFILNNRFSFSH FT KGFEAALQSQYVSKQYMSNAKQAEQTLDAYFVSNLNLAYTFQLRHVKSVTVGFTIYNLF FT NEKYENNGYAGSGYTLKDGKPERYNYAGYAAQAGTNVMGNISIRF" FT misc_feature complement(672025..674115) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 96.5, E-value 4.7e-26" FT misc_feature complement(674182..674241) FT /note="Signal peptide predicted for BF0565 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.964 between residues 20 and 21" FT CDS 674454..675359 FT /transl_table=11 FT /locus_tag="BF9343_0541" FT /old_locus_tag="BF0566" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT transport protein BT2389 SWALL:AAO77496 (EMBL:AE016935) FT (303 aa) fasta scores: E(): 3.5e-91, 81.66% id in 300 aa, FT and to Vibrio parahaemolyticus conserved hypothetical FT protein vp2598 SWALL:BAC60861 (EMBL:AP005082) (288 aa) FT fasta scores: E(): 1.1e-42, 42.9% id in 282 aa, and to FT Pseudomonas putida conserved hypothetical protein PP1353 FT SWALL:AAN66976 (EMBL:AE016779) (282 aa) fasta scores: E(): FT 1.6e-42, 44.36% id in 266 aa" FT /db_xref="GOA:Q5LHR0" FT /db_xref="InterPro:IPR006685" FT /db_xref="InterPro:IPR006686" FT /db_xref="InterPro:IPR010920" FT /db_xref="InterPro:IPR011014" FT /db_xref="InterPro:IPR011066" FT /db_xref="UniProtKB/TrEMBL:Q5LHR0" FT /protein_id="CAH06320.1" FT /translation="MLLFQTTQQVADSLQVAAEKLDQAIAQADGLDKLGLITQQLIDSG FT IQAGGHILKAVIVFLVGRFLIRMLNRLVGRVMDKRNVDISIKTFVKSLVNILLTVLLIV FT SVVGALGVETTSFAALLASAGVAVGMALSGNLQNFAGGLVILLFKPYKVGDWIEAQSVS FT GTVKEIQIFHTILTTADNKLIYVPNGALSSGVVTNYSNQKTRRVEWIFGVDYGEDYNKV FT EKVVREVLTADKRILNDPAPFIALHTLDASSVNVVVRVWVESGDYWGVYFDINKTIYAT FT FNEKGINFPFPQLTVHQAPN" FT misc_feature 674454..674510 FT /note="PS00430 TonB-dependent receptor proteins signature FT 1." FT misc_feature order(674583..674651,674718..674786,674829..674897) FT /note="3 probable transmembrane helices predicted for FT BF0566 by TMHMM2.0 at aa 44-66, 89-111 and 126-148" FT misc_feature 674724..675323 FT /note="Pfam match to entry PF00924 MS_channel, FT Mechanosensitive ion channel, score 237.1, E-value 2.1e-68" FT misc_feature 674943..675047 FT /note="PS01246 Uncharacterized protein family UPF0003 FT signature." FT CDS complement(675429..675668) FT /transl_table=11 FT /locus_tag="BF9343_0542" FT /old_locus_tag="BF0567" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2388 SWALL:AAO77495 (EMBL:AE016935) (79 aa) fasta FT scores: E(): 6.9e-20, 73.07% id in 78 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHQ9" FT /protein_id="CAH06321.1" FT /translation="MEKYLIHSNELHLIDQERIHQAVEQMVESLDMAAGSTFSFDLYKV FT VETYFKDLDKRREINLLLGITDNTYDPTEDFGVC" FT CDS 675796..676383 FT /transl_table=11 FT /locus_tag="BF9343_0543" FT /old_locus_tag="BF0568" FT /product="putative RNA polymerase ECF-type sigma factor" FT /note="Similar to previously sequenced Bacteroides fragilis FT RpoE SWALL:Q8VTB1 (EMBL:AF329100) (187 aa) fasta scores: FT E(): 1.5e-11, 31.18% id in 186 aa, and to Bacteroides FT thetaiotaomicron RNA polymerase ECF-type sigma factor FT BT1053 SWALL:AAO76160 (EMBL:AE016930) (202 aa) fasta FT scores: E(): 6.8e-12, 29.73% id in 185 aa, and to FT Bacteroides thetaiotaomicron RNA polymerase ECF-type sigma FT factor BT1617 SWALL:AAO76724 (EMBL:AE016932) (187 aa) fasta FT scores: E(): 7.4e-12, 32.58% id in 178 aa" FT /db_xref="GOA:Q5LHQ8" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="InterPro:IPR014327" FT /db_xref="UniProtKB/TrEMBL:Q5LHQ8" FT /protein_id="CAH06322.1" FT /translation="MNQFLDFDQKLYAELRKGSEHAFVTVFERYNRLLYALAYRYFKSG FT EEAEDAVQYTFMKLWEQRSSFEFQSGIRSLLFTILKNYIMNELRHRQIVFEKHYEMAQR FT NEEADDSFLKNFEDKDFREHLRTAIGKLPPQKQKICRLKIEKGLSNQEIADEMHITVPT FT VKSHYTQAIKILRAEIESLIVLLHVLWIHFLE" FT misc_feature 675871..676074 FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 64.0, E-value 2.7e-16" FT misc_feature 676237..676302 FT /note="Predicted helix-turn-helix motif with score FT 1507.000, SD 4.32 at aa 148-169, sequence FT LSNQEIADEMHITVPTVKSHYT" FT CDS 676445..677443 FT /transl_table=11 FT /locus_tag="BF9343_0544" FT /old_locus_tag="BF0569" FT /product="putative anti-sigma factor" FT /note="Similar to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrF SWALL:Q8VTB0 FT (EMBL:AF329100) (336 aa) fasta scores: E(): 1.6e-17, 31.95% FT id in 241 aa, and to Bacteroides thetaiotaomicron putative FT anti-sigma factor BT1618 SWALL:AAO76725 (EMBL:AE016932) FT (335 aa) fasta scores: E(): 8.2e-23, 35.74% id in 277 aa, FT and to Bacteroides thetaiotaomicron putative anti-sigma FT factor BT0753 SWALL:AAO75860 (EMBL:AE016929) (341 aa) fasta FT scores: E(): 2.9e-21, 31.15% id in 321 aa" FT /db_xref="InterPro:IPR006860" FT /db_xref="InterPro:IPR012373" FT /db_xref="UniProtKB/TrEMBL:Q5LHQ7" FT /protein_id="CAH06323.1" FT /translation="MKIDDAIIDKVLNNEASVEEAGLVAEWFATEEGSEYLSGRLESES FT ARLTEERAREWLDHPVPEERMRERFIGQIKPEKKIVSYRRGLIAAAVLIPFLFLSIFLW FT FLADRTGVFSATEYAELKVPCGEQMQVVLQDGTVIQLNSDTRLRYPKKFGLFSRSVELW FT GEGFFVVAKDKKRPFIIDLKGVEVKVTGTKFNVKAYPSEPNVWVTLEEGGVLLKDTKNK FT EYPLVPGESAEYNRTSGICQITKPDDMSQISSWRSNSLNFYLTPLRDIIKVMERQYDVH FT FVVRDSTLLNNRFTLSTSKVNVDDVLRDLEAVSWIRFLQTEDGGFEIQKEK" FT misc_feature 676697..676765 FT /note="1 probable transmembrane helix predicted for BF0569 FT by TMHMM2.0 at aa 85-107" FT CDS 677449..680052 FT /transl_table=11 FT /locus_tag="BF9343_0545" FT /old_locus_tag="BF0570" FT /product="conserved hypothetical protein" FT /note="Similar to Xanthomonas axonopodis hypothetical FT protein XAC1774 SWALL:Q8PLM1 (EMBL:AE011809) (790 aa) fasta FT scores: E(): 2.3e-40, 28.57% id in 777 aa, and to FT Xanthomonas campestris hypothetical protein XCC1756 FT SWALL:Q8P9U1 (EMBL:AE012277) (790 aa) fasta scores: E(): FT 3.6e-38, 29.04% id in 778 aa" FT /db_xref="GOA:Q5LHQ6" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012341" FT /db_xref="InterPro:IPR016518" FT /db_xref="UniProtKB/TrEMBL:Q5LHQ6" FT /protein_id="CAH06324.1" FT /translation="MNYYSIDRCRPCSGAASIFLDKLLYGNSYFLSDGVLAYVVKGPLR FT IFNFKYEPDIYTQEISQQICVYMKYLFTLLMACLSLSTTYGTVHHPSSSVSSGRWVVWA FT EKPATSWQDAFVTGNGRHGTMVMGQPGSERIICVHEELFIRGWDRHKVAVPSTASLLPE FT VRRLIESGRSDAADELMTDEADRQLVAMGAVQRWPLIPHPAFDLCIRYTDTTLQAENGY FT RRQLDLETGETSAFWGGRGGVTESVFSSREHNVNVLRLKATGQRKINLVLGLKETPGRE FT GVHFEHNLDSAFSSVSTEAFSGWLSYRAAYKYDAGGYEGLARVSLKGGSMITEGDSLRI FT ADADEVLVLVRITPLENANLSVRPSVQRELSRLPLDYNTLLLPHSRKHAEMFRRMQLDL FT GCSSDWKTTSTEKMLSDIHKHGVTPLFLEQIHAMGRYLLISSSGKYPPPLQGIWGGGWK FT PGWIGGFVWDSNINLAVSAASMGNLHECAESYIGYVESLLPGWRLNARNYLGCRGFIVA FT HYNDPESGYLTHFGRSFPWMCWPGGAGWNIRSFYEYAMLTGNEAFLKKHVFPLYREMAD FT FYEDYLTMDGDSLYHICPSVSPENAPPGTDTWLSKDATMDVAIAKEVFRLLLEMGRTFR FT ADKKELAKWNNYLQRLPSYRINDEGALAEWIDEAYQDVYNHRHLSHLYPVFPGSQLGKS FT EGDPRLIHAARIALNKRFAFDTGSAHGLIHVALQAVRLGDIDKVKTNLDRFSRRHYLYD FT GLVTSHDPEHQVYNLDAVLSIPRLLMEMLVYTEKGKIELLPAWPCDYADGSIKGIKIYG FT GHTLDITWKAGKLIEAVLYARQNERYEVVCGDVRRHVQLHKGKTYHFPASFFAEK" FT CDS 680148..683429 FT /transl_table=11 FT /locus_tag="BF9343_0546" FT /old_locus_tag="BF0571" FT /product="putative TonB-linked outer membrane receptor FT protein" FT /note="Similar to Bacteroides CACcae TonB-linked outer FT membrane protein OmpW SWALL:Q93FV1 (EMBL:AF305878) (947 aa) FT fasta scores: E(): 2.3e-60, 28.54% id in 995 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT2461 FT SWALL:AAO77568 (EMBL:AE016936) (1134 aa) fasta scores: E(): FT 6.6e-81, 35.39% id in 1130 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT4724 SWALL:AAO79829 FT (EMBL:AE016946) (1139 aa) fasta scores: E(): 2.4e-78, FT 30.19% id in 1156 aa" FT /db_xref="GOA:Q5LHQ5" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR011662" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LHQ5" FT /protein_id="CAH06325.1" FT /translation="MKTRTRTKMLLLLGVLLFGFTVSAWSQKVSLNFNNEKVEKILSSI FT KAQTGMGLVFSDQLIDVNRKISIQVKDASLDEALSKLLAGTKVTFEIKNNKIYFIEKKA FT DQQSGSRKKKVSGVVKDATGEPIIGANVVEKGVGTNGVITNLDGEFTLEVPENASLIIS FT YIGYLQQDVSTKGKDAFNIIMKEDTKTLDEVVVVGYGVQKKVNLTGAVAAVDSKSLQNR FT PVTNVSNAIQGLLPGVTVISGTGQPGSDNTTIRVRGVGTLNNSNPMYVVDGLPVSSINE FT VDPSDIENISVLKDASSAAIYGSRAANGVILITTKKGGDKAPTLRYDGYVGWQKPTALP FT EYLHSWEYAKLYNKAMVNEGKNPIYTDEEIEKFRNGSDPDNYPDTDWQGLFYKTGLQHS FT HRAEISGGTDKMTYMFSAGYLGQDGIIDIAKYDRYSVRGNMNAKMGKFTAGMNLSFTYG FT EAQEPVSGFTGEMSNIFSQINQIAPFIPYKYSNGYYGYANDGNPLAFIEEGNLRTTKQH FT ITRAIGNVSYEPIKGLKIQEIVGYEYKSISDEKFIKDIQYYNWKTGEPTKYQGPNNQTD FT ERKNGLKLNLQTLVSYNNTFGKHTVGALAGYEQEYYREDWTKGYRKNFLNNDLWELNAG FT SPDGQTADGSANEYALRSFFGRLTYDYDNRYLVEANIRRDGTSRIFKDSRWGVFPSFSG FT AWRIINEPFMEGTRNVLSDLKLRGGWGVLGNQAISYYSYQSVLDQANYSFGGTVVQGVA FT PVDGANRNLIWETTETLNFGLDMGFLGNQYTLSIEGYRKLTYDILMKLPVSTLYGLNAP FT YQNAGKVKNTGLEITAGYKLNTHGWNFQVSANAAYNKNEVMDLKNGGARIWSGKYFNQE FT GYAINSIGGYIAEGLFKTEEEVANSATIPGTDTAPGDIKYRDINNDGKIDGEDRVYIGN FT TMPKWTFGLNLFAEWKGLDATFLFQGAADVQGYLAGPGVVGEMIGAKGKPSYMYRDCWD FT AETNPNGKFPRAFSSYRQNNSIYNPSSFWIVNSSYLRLKNFQLGYTLPKEWCNMMGISR FT IRVYYSGQNLLTFTKFDKGFDPESPEGGSSYPQVKTNTFGLNITF" FT misc_feature 680148..680225 FT /note="Signal peptide predicted for BF0571 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.650 between residues 26 and 27" FT misc_feature 680172..680225 FT /note="1 probable transmembrane helix predicted for BF0571 FT by TMHMM2.0 at aa 9-26" FT misc_feature 680760..683426 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -1.0, E-value 0.00018" FT CDS 683442..685010 FT /transl_table=11 FT /locus_tag="BF9343_0547" FT /old_locus_tag="BF0572" FT /product="putative outer membrane protein" FT /note="Similar to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrH SWALL:Q8VTA8 FT (EMBL:AF329100) (495 aa) fasta scores: E(): 1.1e-11, 26.63% FT id in 552 aa, and to Bacteroides thetaiotaomicron FT hypothetical protein BT0361 SWALL:AAO75468 (EMBL:AE016927) FT (601 aa) fasta scores: E(): 3.3e-17, 29.41% id in 612 aa, FT and to Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT4089 FT SWALL:AAO79194 (EMBL:AE016943) (598 aa) fasta scores: E(): FT 1.2e-16, 28.14% id in 597 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LHQ4" FT /protein_id="CAH06326.1" FT /translation="MKKIIYSLLFAALFSACSTDFLDRNPLDKPSNEAFWRTEKDAMAA FT ATGCYNGWFSMDEVIYADCASDNAYNPFTWEGWAVQAAGTATPTDPGYSYMGYGNMVRY FT NNFLENIHRPEMNEDLRKRLIAEVRFLRAWDYFQKVAHYGDVPLVTSVLEIKNANLPRT FT EKAKVVEFILKELKEIAPQLPESYSGSDVGRITRGAALTLKARLELFEHQYDDCMATCS FT EVMGLGYELFLDYKGLFKIANENNSEVILDVQYVESLYGNWVLGVLPPASVGGWCSINP FT TQSLVDAFECEDGKTIEESEVYDPKEPYLHRDPRLAVTVLAPGNLYEGKRYDPIDVKDP FT NGDYYAPYGRSKTGYLVRKYVDDLSDYADMWDCGMNAIVMRYAEVLLMYAECKIELNQI FT DNSVYDILDDIRTRAKMPVVDRTRYTGQEKLRELLRRERRVELAMEGLRWFDICRWKIG FT EQVLNGKVYGCLLGTVDPVTGALSLTNERIFVENRKFDPAKHYLWPIPQTVIDATPAIV FT QNPHY" FT misc_feature 683442..683507 FT /note="Signal peptide predicted for BF0572 by SignalP 2.0 FT HMM (Signal peptide probability 0.987) with cleavage site FT probability 0.392 between residues 22 and 23" FT misc_feature 683460..683492 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 685029..687956 FT /transl_table=11 FT /locus_tag="BF9343_0548" FT /old_locus_tag="BF0573" FT /product="putative beta-galactosidase" FT /note="Similar to Thermoanaerobacter thermosulfurogenes FT beta-galactosidase LacZ SWALL:BGAL_THETU (SWALL:P26257) FT (716 aa) fasta scores: E(): 4.8e-27, 28.11% id in 754 aa, FT and to Bacteroides thetaiotaomicron beta-galactosidase FT BT4684 SWALL:Q89YP7 (EMBL:AE016946) (895 aa) fasta scores: FT E(): 9.8e-91, 34.72% id in 792 aa, and to Bacteroides FT thetaiotaomicron beta-galactosidase BT0983 SWALL:Q8A934 FT (EMBL:AE016930) (882 aa) fasta scores: E(): 6.4e-72, 33.29% FT id in 835 aa" FT /db_xref="GOA:Q5LHQ3" FT /db_xref="InterPro:IPR000421" FT /db_xref="InterPro:IPR006101" FT /db_xref="InterPro:IPR006102" FT /db_xref="InterPro:IPR006103" FT /db_xref="InterPro:IPR006104" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013812" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR023230" FT /db_xref="UniProtKB/TrEMBL:Q5LHQ3" FT /protein_id="CAH06327.1" FT /translation="MVKVTEMFFRIFFFCSMLVFCSFPALAGEAEARVVLNMNTGWAFH FT RGEVESGGQPGLDDSGWIAAIIPHIMQLEKKHCGGDIIYDGVGWYRRTFRVPSQYKDKQ FT IKISFEGVMNACEVYLNGQKISAHRGGYVGFVTDITTRINWDRDNLLAVRVSAEYDPLT FT PPGKPQAGMDFYYYSGIYRDVEMVISDPLHITHALEEEEVAGGGIFVTYPVVGKEKAVT FT HVKAHVRNEGKRKRKAQLRTQLIDKSGKIVACQLTPFRLSAGEAIHLEQNLEIVHPSLW FT HPYDPNLYTLQNEIVENGKVVDCHTESIGIRTIAYTRDGGFYINGESLYLRGANRHQAF FT AHIGDAAANSMQERDVIDLKRGGCNAVRAAHYPQDPAFLAACDKYGLLVVECIPGWQYF FT KNDSTFISRLYEVGKQMIRRDRNHPSVILWETALNESRYPAEIARNLYAIAHIEYPGDQ FT MYTAGDYFGHADRVDCFDVFYKQVSRFPKDGDVMSNYPEDQIAVKPLFCREWGDGVGEK FT PRVSLMENEEEQLKQCRGRFLQLNGHGYFDWCMLDANPRMGGHFLWSYNDYARGAEQET FT MFCGIVDINRYPKFSYYMMQSMRDKEISQPGLYDGPMVFIASQNTASRYVSSVNEITVF FT SNCDEVRLFRNHHLIGKQMRKERTPLYRSIVEKGGSPCYVFNAGTYEAGELVAEGIVDG FT KVVATHSVRTPEQPRQVKIWLKEENIQPVADGSDMIPVYFKVCDSNGTLVNTSDVRIHI FT SVSGEGSLIGDGIERIGINPQLVEGGVGYALIRTTCRPGKIHISVTADGLRGDTREIVT FT RRYDGVFVPEGYHVPYSGDEEEGVVVKATAWENVIRTKTPLKVVRVEATSEQKRYEASH FT ITDGDDFSWWIADDESQPQIVLLELERSVNVFASRIRFQKDSSTYTHKVEISIDGKNWE FT TLYERECTGWDFKPVQIGKELKYMRLTIEKSSEGAAGLAEVTLYQ" FT misc_feature 685047..685109 FT /note="Signal peptide predicted for BF0573 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.999 between residues 21 and 22" FT misc_feature 685083..685598 FT /note="Pfam match to entry PF02837 Glyco_hydro_2_N, FT Glycosyl hydrolases family 2, sugar binding domain, score FT 26.1, E-value 8.2e-10" FT misc_feature 685650..685964 FT /note="Pfam match to entry PF00703 Glyco_hydro_2, Glycosyl FT hydrolases family 2, immunoglobulin-like beta-sandwich FT domain, score 12.0, E-value 0.00028" FT misc_feature 685971..686840 FT /note="Pfam match to entry PF02836 Glyco_hydro_2_C, FT Glycosyl hydrolases family 2, TIM barrel domain, score FT 69.2, E-value 7.5e-18" FT misc_feature 686121..686198 FT /note="PS00719 Glycosyl hydrolases family 2 signature 1." FT misc_feature 686343..686372 FT /note="PS00215 Mitochondrial energy transfer proteins FT signature." FT CDS 687957..690752 FT /transl_table=11 FT /locus_tag="BF9343_0549" FT /old_locus_tag="BF0574" FT /product="putative glycosyl hydrolase" FT /note="Similar to Aspergillus candidus beta-galactosidase FT precursor LacB SWALL:Q8TFE6 (EMBL:AJ431643) (1005 aa) fasta FT scores: E(): 3e-18, 23.5% id in 1004 aa, and to Aspergillus FT niger beta-galactosidase precursor LacA SWALL:BGAL_ASPNG FT (SWALL:P29853) (1006 aa) fasta scores: E(): 7e-18, 28.5% id FT in 421 aa, and to Pyrococcus horikoshii 778aa long FT hypothetical beta-galactosidase precursor PH0511 FT SWALL:O58247 (EMBL:AP000002) (778 aa) fasta scores: E(): FT 7e-14, 32.07% id in 212 aa" FT /db_xref="GOA:Q5LHQ2" FT /db_xref="InterPro:IPR001944" FT /db_xref="InterPro:IPR006104" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LHQ2" FT /protein_id="CAH06328.1" FT /translation="MKKVMNMNYRSLTLSILLGMIVHFTVEAQTLPEKQFFHPDRVKYD FT KDCFTIEGKDIFILSAAFHYFRCPQELWRDRFRKIKEAGFNTVETYVPWNWHERNMPKS FT VDDYSQCNFDDLKAWLHMAHEEFGLYTIVRPGPFICAEWAGGAYPRWLAKFCPDSYDTS FT FWLRSNHPEHMKWSEHWYNAVCRVFSEEQLTRKQPGEKGIIMVQLENEYIYFDMESEKK FT EEFLRVLSDACIRNGIDVPLFTCVTPEVRGSHDPVISQLFDMDNQYVWWNMHEAKSRIE FT KLKAEQPNAPAFVCELQGGWFSTVGGRLSEDSYLDGRHARGMALMAMAGGSTGLNYYMF FT FGGTHFAGWGARRMTTTYDYGAPLKENGGVGEKYAAVKGIGEVVDKFGGLLVRSRPVRF FT DVQGADNLTIGIRRAADGTLFVFLLNRDKKQAFRQLVNLTVEGKPMRIDCQLAALDSKL FT LVVHAGTDTVEWYPREQTLPERPVALPLPITITDVWRKDEDFRGDWIPLRKGKSLPELG FT VNDCRYSMYRSQVNLTQKEVDRYGSLVFELFTGDPVYVRVNGEFAERVSKDELDNTFIV FT SGLLHKGVNEIIAIYENRGHAHGYRPMEELSGVKQAGFGRRQTGIQPIEEWFVKSVGTD FT EPRLMPAVFAEDAGWEKILLDQQTIDNLATLQIAGLEKPKWPAAWILQEKAGCAVYRTC FT IRWTPEMIREGMTVLEFGCIDDAGTLWVNGVEVGTHEEWDKPYVINVAPFIHEGDNEIA FT MVVSNRSGAGGLLKGVRLKQEFEVIKKLNWEVSTDLGGICQDWNLGTGSTEGWSVVKLS FT ADYPLVRKGELTGTVDGGRDALLTWYRLEFNMPRKNPSVWIPWKLIVNATGTGYMWLNG FT HNIGRYWEEGPQREFYLPECWLRAGEKNVIILGLRQSETKGACLFGAEVAPYTEDVECM FT E" FT misc_feature 687957..688040 FT /note="Signal peptide predicted for BF0574 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.984 between residues 28 and 29" FT misc_feature 687975..688034 FT /note="1 probable transmembrane helix predicted for BF0574 FT by TMHMM2.0 at aa 7-26" FT misc_feature 687981..690371 FT /note="Pfam match to entry PF01301 Glyco_hydro_35, Glycosyl FT hydrolases family 35, score -6.0, E-value 5.3e-08" FT CDS 690764..692344 FT /transl_table=11 FT /locus_tag="BF9343_0550" FT /old_locus_tag="BF0575" FT /product="putative glycosyl hydrolase/xylanase" FT /note="Similar to Caldocellum saccharolyticum xylanase XynF FT SWALL:O30426 (EMBL:AF005383) (1347 aa) fasta scores: E(): FT 4.2e-41, 31.79% id in 695 aa, and to Bacteroides FT thetaiotaomicron putative beta-xylosidase BT2852 FT SWALL:AAO77958 (EMBL:AE016937) (514 aa) fasta scores: E(): FT 4.9e-57, 36.89% id in 534 aa, and to Clostridium FT acetobutylicum possible beta-xylosidase, family 43 of FT glycosyl hydrolases CAP0114 SWALL:Q97TI7 (EMBL:AE001438) FT (531 aa) fasta scores: E(): 4.5e-55, 37.91% id in 546 aa" FT /db_xref="GOA:Q5LHQ1" FT /db_xref="InterPro:IPR006710" FT /db_xref="InterPro:IPR008985" FT /db_xref="InterPro:IPR013320" FT /db_xref="InterPro:IPR023296" FT /db_xref="UniProtKB/TrEMBL:Q5LHQ1" FT /protein_id="CAH06329.1" FT /translation="MKKYLYVLIAWMLPLCSIHAQAPVWNPDNGNGTFTNPIMWGDWPD FT PDVIRVGDDFYFVSTSMHYVPGCPIATSKDLVNWKMAGYAVDRYDEDARYDLKGGDRYL FT RGSWAATIRHHNGKFYVGFCTPSWEGEGPGHFSICIADDVKGPWERTIFPEYLYDPGLL FT FDDDGKVYVFHGQGTLYVTELASDAKSVKGEKVKIWDKRFKNAHEFGGGYGMEGAHAYK FT INGKYYLTCPAGGTEGWQICLRSDNIYGPYEHKLIMNDSGSYPPNGLHQGGMVQLKNGD FT WWFIIMQDRGPIGRVPHLVPVKWVDGWPMLGSGGKDIITYPKPEVGKTYPFASPATTDE FT FNTSSLGLQWQWNHNPDNSRWSLKERKGHMRLKASYAESLKTARNTLTQRVQGPSSEAT FT VELDVSGLKDGNVAGFGVFEFPYAYVAVEQTNGEKKIVMCNDGQTIETIDRFEGNKIWI FT RARVMDVGFRAVFYYSTDGKYFLPIGNELSMGLGLVWTANRFALFNFSKEKAGEDGYTD FT FNWFRFTNK" FT misc_feature 690764..690823 FT /note="Signal peptide predicted for BF0575 by SignalP 2.0 FT HMM (Signal peptide probability 0.982) with cleavage site FT probability 0.678 between residues 20 and 21" FT misc_feature 690857..692341 FT /note="Pfam match to entry PF04616 Glyco_hydro_43, Glycosyl FT hydrolases family 43, score 254.7, E-value 1.1e-73" FT CDS complement(692540..692716) FT /transl_table=11 FT /locus_tag="BF9343_0551" FT /old_locus_tag="BF0576" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4646 SWALL:AAO79751 (EMBL:AE016946) FT (58 aa) fasta scores: E(): 1.9e-17, 70.69% id in 58 aa, and FT to Clostridium perfringens hypothetical protein CPE1483 FT SWALL:Q8XKB7 (EMBL:AP003190) (64 aa) fasta scores: E(): FT 2.6e-09, 51.92% id in 52 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHQ0" FT /protein_id="CAH06330.1" FT /translation="MELPEDPMMLFSVINMKLRDCYASLDELCEDMNISKDILIGKLES FT IGFEYNAEQNKFW" FT CDS complement(692812..694035) FT /transl_table=11 FT /locus_tag="BF9343_0552" FT /old_locus_tag="BF0577" FT /product="conserved hypothetical lipoprotein" FT /note="Similar to Leptospira interrogans hypothetical FT protein LA1357 SWALL:Q8F6F0 (EMBL:AE011315) blast scores: FT E(): 3e-04, score: 48 31% id" FT /db_xref="InterPro:IPR011047" FT /db_xref="InterPro:IPR015943" FT /db_xref="UniProtKB/TrEMBL:Q5LHP9" FT /protein_id="CAH06331.1" FT /translation="MKIRNLMLALAGTALVFSACEKDPNPKVPTTDANIALATILPNPD FT GMTGAAYLQLIRDEFPQNTNNNNGIPIPYGGSYPIIEGNDIFVFPGYMGDSKNELVKYT FT RNNGQLSRTGTMKLPPNSSATNIVFASTGKAYLSMAGLGKIAIFDPTTMTQQGEIDLTS FT LGVSDSNPDPSAMLLRDGLLFVGLSQMVGGWIPPQDRPYSDIAIIDTQTDKLLKMITDK FT TSGISMPTRPIDRYSIFMDEKKDIYISCMGGFGMVKGHNAGVLRIKAGETEFDPTYQWT FT ITGAAISGEEKTAGFISAIRYVGNGKAYAYINMPGYYKPGEQGHTAIADLAVEIDLYNK FT TMKKVQGLDLSNGFGVMLSLYKGSMLIGNSSAKAKGIYSLDIQTGEVSKEPILTTVGNP FT ILCYYFEK" FT misc_feature complement(693973..694035) FT /note="Signal peptide predicted for BF0577 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.366 between residues 21 and 22" FT misc_feature complement(693976..694008) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(694069..696408) FT /transl_table=11 FT /locus_tag="BF9343_0553" FT /old_locus_tag="BF0578" FT /product="putative TonB-dependent outer membrane receptor FT protein" FT /note="Similar to Stigmatella aurantiaca putative iron FT transport TonB-dependent membrane receptor MxcH FT SWALL:Q9F634 (EMBL:AF299336) (869 aa) fasta scores: E(): FT 2e-15, 24.57% id in 700 aa, and to Bacteroides FT thetaiotaomicron putative TonB-linked outer membrane FT receptor BT2065 SWALL:AAO77172 (EMBL:AE016934) (796 aa) FT fasta scores: E(): 5.1e-29, 29.07% id in 798 aa, and to FT Leptospira interrogans probable TonB-dependent receptor FT CirA or La1356 SWALL:Q8F6F1 (EMBL:AE011315) (684 aa) fasta FT scores: E(): 1.9e-16, 21.71% id in 723 aa" FT /db_xref="GOA:Q5LHP8" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="UniProtKB/TrEMBL:Q5LHP8" FT /protein_id="CAH06332.1" FT /translation="MKYRILVLTAILFTACNLLHAQVQTGKLSGVIIDANNEETLVGAN FT IYVESLKKGTSTDKNGEFSIEVPAGHYRIVISYMGYRTRQEEVRISELKTKKLVIRLEP FT ETQSLGEVVVTAKSEARQLREQAMPMSVISMQQLQGTVSNVQDVLSKTVGVTIRNTGGV FT GSSSRVSVRGLEGKRIGFFIDGSPMNDNSDFIDINDIPVDMIDRIEIYKGVVPARFGGS FT SVGGAVNIVIREYPPKYLDASYSIESFNTHKLSLVTKRNIATKGLEFGGGGFYTYSDNN FT YKMESPFEEGLIIKRNHDKFKKLAVAGSLKARKWWFDLAEFEPVFIHTFKEIQGIEYNI FT EKAHTYSDAFIFANKLEKENFLTEGLDMESNLAYAYTVFHMVDTAAYRYNWDGTTYPAV FT SEYGGEIGKWASNARNEKHTITHKLHLNYVINNNHSINLNSLFSFASGHPKDDLKNKVV FT GYKTNFRSTMASWIAGLGYDFRTDNDIFLNSLNVKYYMYGMNTHMSSIMSSEAEKVDML FT KRDFGISNALRYRFTPDFMGKLSVGYDVRLPAESELLGDGYTVAPSGNLLPERNTSVNL FT GFLLDRTGKDASNLQVEVNTFYGYLENMIRFTGGYLQSQYQNFGKMRTLGVEVEVKADL FT THWLYGYCNMTYQDLRDVRKFEPNTHITNPTKGSRMPNIPYLLANAGLEYHKENLFGGK FT GQNTRIFTDGSFVEEYFYDFEQSRFQERRIPRTFSANIGIEHSFMNGRFIISARMNNLT FT DARMMSEFNRPLPGRNWGVRLRYVLK" FT misc_feature complement(694075..696039) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 107.5, E-value 2.3e-29" FT misc_feature complement(696346..696408) FT /note="Signal peptide predicted for BF0578 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.994 between residues 21 and 22" FT misc_feature complement(696361..696393) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 696742..697746 FT /transl_table=11 FT /locus_tag="BF9343_0554" FT /old_locus_tag="BF0581" FT /product="putative AraC family transcriptional regulatory FT protein" FT /note="Similar to Pseudomonas aeruginosa regulatory protein FT PchR or PA4227 SWALL:PCHR_PSEAE (SWALL:P40883) (296 aa) FT fasta scores: E(): 7.9e-13, 37.03% id in 162 aa, and to FT Anabaena sp. transcriptional regulator ALR2575 SWALL:Q8YTY8 FT (EMBL:AP003589) (339 aa) fasta scores: E(): 1.6e-18, 26.71% FT id in 307 aa, and to Anabaena sp. transcriptional regulator FT ALR2587 SWALL:Q8YTX6 (EMBL:AP003590) (327 aa) fasta scores: FT E(): 1.5e-17, 35.64% id in 202 aa" FT /db_xref="GOA:Q5LHP7" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:Q5LHP7" FT /protein_id="CAH06333.1" FT /translation="MVTRLMKHDLCEMVLEWPMPNIVKGKRTEKNNYRIDNTYLKATFE FT EISTPLFSIMDQHISSEEPIKIYTRADDYHAVWFCATFAGHATCCYNSVIRSEEWNKGD FT ANLLKCDGVDSCVHFPKNTPFHMMEIMLSHDYLRELAIHYPDLLGGKDFETVLCNGQYR FT AYRKNRPFGPGVYKALHDIRLSQLNGNMASMYADAKIREILSLFLAGQEEENYLHCSCT FT IGITCDKIHHARAIIEQEYLNPPSLHQLALRVGTNECTLKRGFKTVFGTTVFGHIFEYR FT MKMACRYLLDSSKTIQEIGACVGYEYHAHFSTAFKRKFGLTPLEYRCSRLSGS" FT misc_feature 697438..697575 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 7.6, E-value 0.53" FT misc_feature 697474..697539 FT /note="Predicted helix-turn-helix motif with score FT 1389.000, SD 3.92 at aa 246-267, sequence FT PSLHQLALRVGTNECTLKRGFK" FT /note="Predicted helix-turn-helix motif with score FT 1389.000, SD 3.92 at aa 245-266, sequence FT PSLHQLALRVGTNECTLKRGFK" FT misc_feature 697582..697710 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature 697594..697725 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 35.6, E-value 9.9e-08" FT tRNA complement(698177..698249) FT /note="tRNA Lys anticodon TTT, Cove score 70.05" FT CDS complement(698344..699483) FT /transl_table=11 FT /locus_tag="BF9343_0555" FT /old_locus_tag="BF0582" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT permease BT2276 SWALL:AAO77383 (EMBL:AE016935) (377 aa) FT fasta scores: E(): 5.7e-119, 82.58% id in 379 aa, and to FT Ralstonia solanacearum probable permease transmembrane FT transport protein RSC2624 or RS00928 SWALL:Q8XW51 FT (EMBL:AL646071) (356 aa) fasta scores: E(): 1.5e-20, 27.38% FT id in 336 aa, and to Deinococcus radiodurans hypothetical FT protein Dr0252 SWALL:Q9RXQ6 (EMBL:AE001886) (373 aa) fasta FT scores: E(): 5.7e-18, 28.45% id in 362 aa" FT /db_xref="GOA:Q5LHP6" FT /db_xref="InterPro:IPR002549" FT /db_xref="UniProtKB/TrEMBL:Q5LHP6" FT /protein_id="CAH06334.1" FT /translation="MERKKITFDSFIRGSICCALIVGLLILFKRLSGVLLPFFVAWLIA FT YMIYPLVKFFQYKLRFKSRIISIFCALFSITIVGISLFYLLVPPMLAEMGRMNDLLVTY FT LTNGAYSSGTVPPTLSEFIHKHIDLQALNRILSEENIMNTIKETVPKLWALVAESINIL FT FSVFASFIILLYVVFILLDYESIAEGWLHLLPGKYRTFASNLVNDIQDGMNRYFRGQAF FT VAFCVGILFSIGFLIIDFPMAIALGLFIGALNMVPYLQIIGFLPTIVLAILKAADTGEN FT FWVILAGALIVFIVVQAIQDGFLVPRIMGKITGLNPAIILLSLSIWGSLLGMLGMIIAL FT PLTTLMLSYYQRFIINKEKIKYDRHEVTDNQSAEENTKK" FT misc_feature complement(698422..699453) FT /note="Pfam match to entry PF01594 UPF0118, Domain of FT unknown function DUF20, score 140.3, E-value 3e-39" FT misc_feature complement(order(698434..698529,698572..698640, FT 698674..698742,698752..698820,698941..699009, FT 699223..699291,699328..699387,699400..699453)) FT /note="8 probable transmembrane helices predicted for FT BF0582 by TMHMM2.0 at aa 11-28, 33-52, 65-87, 159-181, FT 222-244, 248-270, 282-304 and 319-350" FT misc_feature complement(698809..698832) FT /note="PS00030 Eukaryotic putative RNA-binding region RNP-1 FT signature." FT CDS complement(699546..700145) FT /transl_table=11 FT /gene="tdk" FT /locus_tag="BF9343_0556" FT /old_locus_tag="BF0583" FT /product="putative thymidine kinase" FT /EC_number="2.7.1.21" FT /note="Similar to Rhodothermus sp. thymidine kinase tdk FT SWALL:KITH_RHOSI (SWALL:Q9ZIG2) (213 aa) fasta scores: E(): FT 5e-40, 61.49% id in 174 aa, and to Bacteroides FT thetaiotaomicron thymidine kinase BT2275 SWALL:Q8A5G4 FT (EMBL:AE016935) (199 aa) fasta scores: E(): 5.5e-69, 92.42% FT id in 198 aa, and to Bacillus cereus thymidine kinase FT bc5330 SWALL:Q814U0 (EMBL:AE017015) (195 aa) fasta scores: FT E(): 4.1e-33, 49.46% id in 188 aa" FT /db_xref="GOA:Q5LHP5" FT /db_xref="InterPro:IPR001267" FT /db_xref="InterPro:IPR020634" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHP5" FT /protein_id="CAH06335.1" FT /translation="MVLFSEDHIQETRRRGRIEVICGSMFSGKTEELIRRMKRAKFARQ FT RVEIFKPAIDTRYSEGDVVSHDSNSISSTPIDSSASILLFTSEIDVVGIDEAQFFDSGL FT IDVCNQLANNGVRVIIAGLDMDFKGIPFGPMPALCAIADEVSKVHAICVKCGQLASFSH FT RTVKNDKQVLLGETAQYEPLCRECYQRALQEDREKS" FT misc_feature complement(699582..700073) FT /note="Pfam match to entry PF00265 TK, Thymidine kinase, FT score 218.4, E-value 9e-63" FT CDS 700225..700989 FT /transl_table=11 FT /locus_tag="BF9343_0557" FT /old_locus_tag="BF0584" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2274 SWALL:Q8A5G5 (EMBL:AE016935) (241 aa) fasta FT scores: E(): 3e-22, 45.52% id in 246 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHP4" FT /protein_id="CAH06336.1" FT /translation="MPSHSKRNSDVDMQALLNDIELDIQELKYLMEIISREPDSVLRGV FT ARRNIVQMRGRLDALLELLDAKPVIAADASESPENRPVTETIEVVEIPALKETVADIPE FT KNEEAAVAEDSQEAVEPGPLSLSEAVIEQVPTVELDPVADEKEEVFESVSVPQSEEPTV FT KVETRVASSPILAERIKTAGDLRRSISLNDSFRFSRELFGGSMEQMNNVLHQIGEMSSL FT DAALVFLSSKIKVDEENEAMNDFVELLRKHFI" FT CDS 701009..701683 FT /transl_table=11 FT /locus_tag="BF9343_0558" FT /old_locus_tag="BF0585" FT /product="putative tetrapyrrole (corrin/porphyrin) FT methylase" FT /note="Similar to Bacteroides thetaiotaomicron FT methyltransferase BT2273 SWALL:AAO77380 (EMBL:AE016935) FT (224 aa) fasta scores: E(): 4.9e-80, 92.85% id in 224 aa, FT and to Anabaena sp. tetrapyrrole methylase family protein FT ALL4680 SWALL:Q8YN88 (EMBL:AP003597) (285 aa) fasta scores: FT E(): 6.6e-40, 48.41% id in 221 aa, and to Clostridium FT perfringens hypothetical protein CPE0280 SWALL:Q8XNQ2 FT (EMBL:AP003186) (280 aa) fasta scores: E(): 1e-39, 49.77% FT id in 225 aa" FT /db_xref="GOA:Q5LHP3" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR008189" FT /db_xref="InterPro:IPR014776" FT /db_xref="InterPro:IPR014777" FT /db_xref="InterPro:IPR018063" FT /db_xref="PDB:3FFY" FT /db_xref="UniProtKB/TrEMBL:Q5LHP3" FT /protein_id="CAH06337.1" FT /translation="MGKLYVVPTPVGNLEDMTFRAIKVLKEADLILAEDTRTSGILLKH FT FEIKNVMQSHHKFNEHKTVESVVNRIKAGETIALISDAGTPGISDPGFLVVRECVRNGI FT EVQCLPGATAFVPALVASGLPNEKFCFEGFLPQKKGRMTKLKSLVDEHRTMVFYESPHR FT LLKTLTQFAEYFGPERQVSVSREISKIHEETVRGTLSELIEHFTATDPRGEIVIVLAGI FT DD" FT misc_feature 701015..701617 FT /note="Pfam match to entry PF00590 TP_methylase, FT Tetrapyrrole (Corrin/Porphyrin) Methylases, score 137.6, FT E-value 1.9e-38" FT misc_feature 701249..701284 FT /note="PS01296 Uncharacterized protein family UPF0011 FT signature." FT CDS 701719..702576 FT /transl_table=11 FT /locus_tag="BF9343_0559" FT /old_locus_tag="BF0586" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2272 SWALL:AAO77379 (EMBL:AE016935) FT (284 aa) fasta scores: E(): 8.7e-70, 87.01% id in 285 aa, FT and to Chlorobium tepidum hypothetical protein CT1178 FT SWALL:Q8KD76 (EMBL:AE012879) (281 aa) fasta scores: E(): FT 0.00079, 25.75% id in 299 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHP2" FT /protein_id="CAH06338.1" FT /translation="MKKLAILLVCAAMLASCNGLGGGSKDLKAENDSLLMELTQRNAEL FT DEMMGTFNEVQEGFRKINAAESRVDLTRGTISENSATAKQQIASDIEFITKQMEENKAQ FT IAKLQAMLKSSKNNSAQLKKAVESLTQELVAKTQRIEELQAELASKNIRIQELDAAVTG FT LTADKESLAAENEAKAKTVAEQDKAINSAWFVFGTKSELKTQKILEKGDVLKSADFNKD FT YFTQIDIRTTKEIKLYSKRAELLTTHPAKSYELVKDDKGQLTLKITNPKEFWSVSKYLV FT IQVK" FT misc_feature 701719..701781 FT /note="Signal peptide predicted for BF0586 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.685 between residues 21 and 22" FT misc_feature 701737..701769 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 702666..703358 FT /transl_table=11 FT /locus_tag="BF9343_0560" FT /old_locus_tag="BF0587" FT /product="putative haloacid dehalogenase-like hydrolase FT protein" FT /note="Similar to Bacteroides thetaiotaomicron haloacid FT dehalogenase-like hydrolase BT2271 SWALL:AAO77378 FT (EMBL:AE016935) (230 aa) fasta scores: E(): 3.8e-74, 79.13% FT id in 230 aa, and to Clostridium perfringens hypothetical FT protein CPE0762 SWALL:Q8XMC7 (EMBL:AP003188) (230 aa) fasta FT scores: E(): 1.8e-16, 29.48% id in 234 aa, and to Yersinia FT pestis haloacid dehalogenase-like hydrolase family protein FT YPO2295 or Y2128 SWALL:Q8ZE87 (EMBL:AJ414151) (224 aa) FT fasta scores: E(): 2e-16, 32.32% id in 232 aa" FT /db_xref="GOA:Q5LHP1" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006439" FT /db_xref="InterPro:IPR011951" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:Q5LHP1" FT /protein_id="CAH06339.1" FT /translation="MKYKNLFFDLDDTLWAFSQNAYDTFEEVYDKYRLGQYFDSFSHFY FT SLYQRRNTELWVEYGNGQVTKEELNRQRFLYPLQAVGIDNEMLAKRYSDDFFSIIPTKS FT RLMPYAEEVLSYLAPKYNLYILSNGFRELQSRKMRSSGIDTYFNKIILSEDLGVMKPWP FT EIFYFALSATQSELRESLMIGDSWEADITGANGIGMHQAYYNVSGRADFPFRPTYLVTD FT LKELMELL" FT misc_feature 702672..703286 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 75.4, E-value 1e-19" FT CDS 703415..704059 FT /transl_table=11 FT /locus_tag="BF9343_0561" FT /old_locus_tag="BF0588" FT /product="putative amino acid transporter" FT /note="Similar to Thermococcus sp. small neutral amino acid FT transporter A SnatA SWALL:Q8J305 (EMBL:AB093585) (216 aa) FT fasta scores: E(): 3.9e-25, 35.78% id in 204 aa, and to FT Bacteroides thetaiotaomicron integral membrane protein FT BT2270 SWALL:AAO77377 (EMBL:AE016935) (219 aa) fasta FT scores: E(): 4.2e-74, 90.65% id in 214 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical FT protein, putative integral membrane protein BT1108 FT SWALL:AAO76215 (EMBL:AE016930) (241 aa) fasta scores: E(): FT 4.8e-51, 63.03% id in 211 aa" FT /db_xref="GOA:Q5LHP0" FT /db_xref="InterPro:IPR002771" FT /db_xref="UniProtKB/TrEMBL:Q5LHP0" FT /protein_id="CAH06340.1" FT /translation="MDTLLPFALLCFTSFFTLTNPLGTMPVFLTMTHGMTDKERQAVVR FT RATFVSFITLMVFVFAGQFLFKFFGISTNGFRIAGGVIIFKIGFDMLQARYTPMKLKDE FT EIKTYADDISITPLAIPMLCGPGAIANAIVLMEDAHTIEMKGTLIGIIALIYFITFLIL FT RASTRLVKVLGETGNNVMMRLMGLILMVIAVECFVSGLHPILVGILKEGLL" FT misc_feature 703415..703471 FT /note="Signal peptide predicted for BF0588 by SignalP 2.0 FT HMM (Signal peptide probability 0.787) with cleavage site FT probability 0.654 between residues 19 and 20" FT misc_feature 703427..704029 FT /note="Pfam match to entry PF01914 MarC, MarC family FT integral membrane protein, score 242.6, E-value 4.6e-70" FT misc_feature order(703433..703501,703559..703627,703640..703693, FT 703751..703819,703856..703915,703973..704041) FT /note="6 probable transmembrane helices predicted for FT BF0588 by TMHMM2.0 at aa 7-29, 49-71, 76-93, 113-135, FT 148-167 and 187-209" FT CDS complement(704163..705758) FT /transl_table=11 FT /locus_tag="BF9343_0562" FT /old_locus_tag="BF0589" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2033 SWALL:AAO77140 (EMBL:AE016934) (520 aa) FT fasta scores: E(): 9.8e-72, 54.73% id in 528 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT2259 FT SWALL:AAO77366 (EMBL:AE016935) (488 aa) fasta scores: E(): FT 1.9e-07, 25.58% id in 516 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHN9" FT /protein_id="CAH06341.1" FT /translation="MKSIFNLSKGILSVALISVAFASCSEDTMDNINKDKDHTTSVPAK FT FILADVITATAFSNIGGDFNTYYSTYVEHMVGVDNQLANAEKRNGEPSASSTFNNVWGN FT LYSTLKNARIAINISSNEVTGNYTTKGIGEVLAAINAGLIADSFGDTPFSQAALPELAN FT GQPQFLTPELDKQEAIYTDIMEYLDAAITDLPKGDKSDKIRDYDFIYGGKGEAWLKLAY FT GLKARYTMHLLARSSSKEADLQKILEYVDKSYTSIEEQAAFAIYDATNINPLFDFQWSR FT DGLAASKSFADKLIERNDPRLRRIFCIGQGMTTEEDKAVSVQVTGADDPRFLMADNGTA FT EPVKYTYNTPIFVYSQTCPTLLMSYHELLFLKAEALARLNRKDEAAEALKDAVVAAIAN FT AETGVSAAFSAPTVEIYGGVKETTKAITATEAEEYFTNNVKPLFDANPVKEVMVQKYIA FT FLGAFGETTECYNDVRRLKAMGEEYIKLDNPYKFPLRAPYGADDVSANPNVEAAFGNGQ FT YVYTDPVWWAGGSR" FT misc_feature complement(705684..705758) FT /note="Signal peptide predicted for BF0589 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.660 between residues 25 and 26" FT misc_feature complement(705687..705719) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(705770..>708751) FT /transl_table=11 FT /locus_tag="BF9343_0563" FT /old_locus_tag="BF0590" FT /product="putative surface membrane protein" FT /note="Similar (although not the N-terminal region) to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT2032 FT SWALL:Q8A654 (EMBL:AE016934) (955 aa) fasta scores: E(): 0, FT 66.52% id in 962 aa, and to Bacteroides fragilis outer FT membrane protein Omp121 SWALL:Q93TH9 (EMBL:AF357210) (1125 FT aa) fasta scores: E(): 1.6e-47, 28.34% id in 1083 aa. Note: FT This CDS does not have a proper start codon, but the first FT 20 amino acids is a 60bp inverted repeat, marked for FT invertible region CC. This involves possible phase FT variation or a recombination site within this cluster with FT BF0594 that has a proper start codon with the 60bp inverted FT repeat further into the CDS" FT /db_xref="GOA:Q5LHN8" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LHN8" FT /protein_id="CAH06342.1" FT /translation="SSAKTLQISYIGMQTAEVAIAPVIKVILKTDAKALDEVVVTAMGI FT SKEKKALGYAVQDVKGDKLTQASSSNLSSALQGKVSGVEISPSSGMPGASSKMTIRGSR FT SFTGDNTPLYVVDGMPISSSTDLDTFNSVTGSDYANRAVDIDPNDIESINILKGQAASA FT LYGMRASNGVVVITTKSGKGARKGKPEVTINTGLSFDKVSTMPDFQKEFAQGFNGAFSP FT SDSRSWGPLISELANDPKYGGNTDNSYTQKFGKHQGQYYVDQRAKAGLDPWATPRAYDN FT AKDFFNTGVTWNSSANVAQSLDKGSYSLSLGSTTANGIVPSTGMDRYNAKLTAQAQLSK FT NWSTGFNGNFVYSKIKKQTGANNGIMATVYGAPSSYDLGGIPSHAEGDPYTQNTYRSTT FT GFDGAYWAVENNSFKERTQRFFGNAFAKYSTDFGTEDHKLDVKYQLGTDAYTTNYTDTW FT GYGHSNGTGSIEEQSVTNNEINSLLTVTYDWKITPELDLNVLYGNELVDNSSKYKYNLG FT SNFNFPGWNHIANASIYSSTGTYHRERTVGNFGNISLAYRNMLYLNATVRNDIVSSMPR FT NNRSFTYPSVSLGFIFTELEALKNDVLTYGKIRASYAEVGQAGTYYPSYYRTPVYGGGF FT SSGTPIQYPIGSISSYIPYYKIYDPNLKPQNTKSYEIGADFSFWNGLISLNYTYSRQNV FT KDQIFEVPLATSTGYSELITNGGSVHTNSHEITLSVNPIQTKNFNWDFAFNFSKIDNYV FT DKLAPGVSSIMLGGFVDPQVRLSAGDKFPVIYGTSYQRNEEGQIVVDENGMPTLGENRV FT LGNVSPDFRMGFNTTFEFYKFRLSAVLDWKQGGCMYAGSVSTLDYYGVTQKSADYRKAD FT HFYFEKPAVKQLADGSYAPNDIKISGENAYNYFDRLSTISEAGVYGSSFLKLREIALSY FT PVLNKSYLGVTVNVFARNLLLWSEMDNGIDPESSQGNNNMAGAFERFSLPGTSSYGFGI FT TVKF" FT repeat_region complement(708692..708751) FT /note="60 bp inverted repeat for invertible region CC" FT repeat_region 708692..720999 FT /note="complex invertible region CC; active in shotgun" FT CDS complement(709232..710734) FT /transl_table=11 FT /locus_tag="BF9343_0564" FT /old_locus_tag="BF0591" FT /product="putative outer membrane receptor protein" FT /note="Similar to Porphyromonas gingivalis receptor antigen FT B RagB SWALL:Q9ZA59 (EMBL:AJ130872) (501 aa) fasta scores: FT E(): 4.9e-06, 24.09% id in 523 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT2365 SWALL:AAO77472 FT (EMBL:AE016935) (497 aa) fasta scores: E(): 3.8e-43, 36.96% FT id in 514 aa, and to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2269 SWALL:AAO77376 (EMBL:AE016935) (469 aa) FT fasta scores: E(): 4.3e-21, 31.99% id in 497 aa" FT /db_xref="GOA:Q5LHN7" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LHN7" FT /protein_id="CAH06343.1" FT /translation="MKSTIYKALIGATLIIGLSSCVNNWLDVEPGDQVEADEAVTTSAD FT LSSVRAGMYQIIKGTSDFKDYYAARMFYYGEVRGEDMQTEKSGSRSQLCYDMTYSTADN FT APSIWQTPYIVIGRANRIIEAAESGKLTDKEEAADIIAQYAAEAKVARAMAHFDLVRVY FT GKTYTAPDAPNSLGIPVVTTVLGSDSKLIRNTVSEVYTQVIKDLNEAINSKALSESSTP FT GYINLWAAKALLSRVYLTQGDNQKSLDVAEDIIKNSPYKLWKNEEYVGAWSKISGVHSN FT EMLFEIAITGSTDWTDREGIAYLYNEDGYADIIATKKFLDLLNEDPNDVRLGVFLAPTT FT KDFKKLYGTNTVFLNKYPADGLSDLRYNNVPLVRLSEVYLNAAEAAAKLGNQNDKAVEY FT LDAIVKRANPNKTVKGTTVTVDRVLLERRKELIGEGHRFFDAMRNNETVIRYTSKEDQG FT WQQALKEEARSFNRDFYKTLLPIPQDEIDANPSMKDQQNTGY" FT misc_feature complement(710666..710734) FT /note="Signal peptide predicted for BF0591 by SignalP 2.0 FT HMM (Signal peptide probability 0.873) with cleavage site FT probability 0.420 between residues 23 and 24" FT misc_feature complement(710672..710704) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(710756..>713614) FT /transl_table=11 FT /locus_tag="BF9343_0565" FT /old_locus_tag="BF0592" FT /product="putative surface membrane protein" FT /note="Similar (although not the N-terminal region) to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT2364 FT SWALL:Q8A578 (EMBL:AE016935) (1025 aa) fasta scores: E(): FT 2e-135, 43.35% id in 971 aa, and to Bacteroides FT thetaiotaomicron outer membrane protein Omp121 BT2264 FT SWALL:Q8A5H5 (EMBL:AE016935) (984 aa) fasta scores: E(): FT 8.9e-24, 26.07% id in 1028 aa. Note: This CDS does not have FT a proper start codon, but the first 20 amino acids is a FT 60bp inverted repeat, marked for invertible region CC. This FT involves possible phase variation or a recombination site FT within this cluster with BF0594 that has a proper start FT codon with this 60bp inverted repeat further into the CDS" FT /db_xref="GOA:Q5LHN6" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LHN6" FT /protein_id="CAH06344.1" FT /translation="SSAKTLQISYIGMQTAEVAIRPVVKIILKPDTEVLDEVVVTGYGT FT FKKSTFTGAASTMATEKLQDIPTMAIEDKLAGSIPGVQISSFSGAPGATTSVRIRGMGS FT MNAGNDPLYVIDGTPVQSGNISAFNTPNTGEGYNSTGTNVLATLNSNDIESITVIKDAA FT AASLYGSRAANGVIVITTKRGATGKTQFNFRSDWGFSNIAVNYRPTLNGDDRRELIKFG FT LKNYYMDEEGMTAAQAEIALEDDIDAFAAKPVNGWTNWKEILFKNGSHQNYEISAQGGT FT EKTKFYTSLAYAKQEGITARSGLERMTGNANLSHETGRVKVEASTLFSRILQNMTNEGT FT SFASPIMNAFWTASPSTVPYNEDGTFSSNFPLTNGANPVQTRTYNYDRNAITRSFNTLA FT ATVTLWDELKLREKIAFDYTSSIESVWWDPRSNDGRSSNGVFQRYNRTLETLTTQTQLT FT YIKTFAQKHNLDALLGFETEDFTDSWVYTHGSQYPGYKNEIANAGETSSNSNRDKSRLT FT SFLGRVNYNFDNTYYAGVSYRRDGSSRLSRDNRWGNFWSISGSWRFMQESFLESIKNVI FT TDGKLRLSYGVNGTQPSTFYSYMINMYRAGQIYNGQSGMGVIGIGSPDLKWEKNKAFNL FT GLDLTFWDRLSLTLDYYTRKTNDLLMNKRISYVPGYYDPISFAPTTLQNVGSLENKGVE FT ISLSSTNMQTQDLIWTTTFNIGHNKNKLVKLDGIQTDEIDGALIHRVGEPYYSYYMFEY FT AGVDPKTGNEMYYKNDGTNETTTLTSEAQKVIVGHHDPKVEGGLTNFVKWKFIDLNLTL FT TYSLGGKAVDYATWLHDNGGTYTSYGAVPSYYKLEDMWKQEGDNAKLPKFKYGNSRVLS FT SRWLMPTDYLRLKNLSLGFSAPKGLLSKMGISKARVYFSANNLLTWKSKDLLVDPEMPV FT DGLCTFEMPALRTYTFGLEIGF" FT misc_feature complement(710759..713470) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -16.7, E-value 0.00045" FT repeat_region complement(713555..713614) FT /note="60 bp inverted repeat for invertible region CC" FT CDS complement(714211..715392) FT /transl_table=11 FT /locus_tag="BF9343_0566" FT /old_locus_tag="BF0593" FT /product="putative integrase/transposase" FT /note="Similar to previously sequenced Bacteroides fragilis FT transposase BipH SWALL:Q9ZI85 (EMBL:AF038866) (410 aa) FT fasta scores: E(): 2.4e-16, 28.53% id in 396 aa, and to FT Bacteroides thetaiotaomicron integrase protein BT2267 FT SWALL:AAO77374 (EMBL:AE016935) (396 aa) fasta scores: E(): FT 1.2e-112, 75.06% id in 389 aa, and to Bacteroides FT thetaiotaomicron transposase BT0076 SWALL:AAO75183 FT (EMBL:AE016926) (410 aa) fasta scores: E(): 1.1e-19, 29.7% FT id in 404 aa" FT /db_xref="GOA:Q5LHN5" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:Q5LHN5" FT /protein_id="CAH06345.1" FT /translation="MDKIIYSLVYNRKKSLNKKGMALVQVEAYLNRKKKYFSTKVYLSP FT DQWDFKKRMVKNHPNADAINHMLYEFMAEIEKKELGLWQQGKQISLDSLKNSMENQDDS FT TSFIAFFRNEIAKSSLKESTKRNHLSTLELLRSYKKDVSFSELTFEFISSFDHYLQQKG FT YHTNTIAKHMKHLKRHINVAINKEYMEIQKYAFRKYKIKSVENNHTHLSPEELGKIESL FT ELGGRFTKLEKTKDAFLFCCYAGLRYSDFTNLSPENIVKMHQETWLIYKSVKTNTEVRL FT PLYLLFEGKGIEVLNKYQDDLADFFKLRDNSNVNKELLIIAKLSGLNKRISFHTARHTN FT ATLLIYSGVNITTVQKLLGHKSVKTTQVYTNIMDITIVRDLEKSKNNRKVSYM" FT misc_feature complement(714256..714762) FT /note="Pfam match to entry PF00589 Phage_integrase, Phage FT integrase family, score 62.1, E-value 1e-15" FT CDS 715846..718881 FT /transl_table=11 FT /locus_tag="BF9343_0567" FT /old_locus_tag="BF0594" FT /product="putative membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2364 SWALL:Q8A578 (EMBL:AE016935) (1025 aa) fasta FT scores: E(): 4.6e-157, 46.98% id in 1028 aa, and to FT Porphyromonas gingivalis W83 RagA protein or PG0185 FT SWALL:AAQ65420 (EMBL:AE017172) (1017 aa) fasta scores: E(): FT 2.2e-39, 30.84% id in 1057 aa. Note: This CDS contains from FT residue 68 a 60bp inverted repeat unit, marked for FT invertible region CC" FT /db_xref="GOA:Q5LHN4" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LHN4" FT /protein_id="CAH06346.1" FT /translation="MKRKLMLLLTCLFMGIGLVTAQTQKVTGVVISEEDGQPVVGASVL FT AKGTTVGVITDVDGKFTLSGIPSSAKTLQISYIGMQTVEVAIKPVVKITLKPDTEVLDE FT VVVTGYGNFKKSSFTGAASSITTEKLQDVPSLSVQDKLAGSVAGVQITSTSGQPGAVES FT VRIRGMGSINAGNDPLYVIDGVPVMTGDASEFTYSQSGNSLLSTINSNDIESMTVIKDA FT AAASLYGSRAANGVIVITTKKGASGKLKLNVRADWGFSNKAIDYRPILNGEDRRDILYM FT GLKNYALNSGKDETYAVNYADNNIDKYAAKPWSGYTDWEDVLFRNGSHQNYEVNAQGGN FT ERTKFYTSFGYTKQEGITLQSGYERITGRANMSHTADRVTIEASTMFTNSTQNVNSEGT FT SFSSPIMCLAMTASPSTFPYNEDGTFSTSFPALNGANPLQTATYNYDRSTIVRTLNTLS FT ATWNIWDNLNIKETLGYDFNQTNNRVWWDPRSNDGRSSKGVFQRYMMNRSKLNTQTQLT FT YNKTFAEHHNIDVLLGFETEDYKYDYTYTNGNTYPSYLPEITNAGVSRGASNINSYRMT FT SYLGRLNYDYAGKYYVSGSFRRDGSSRLSRDSRWGNFWSVSGSWRLSQEAFMESLSNVI FT TDAKIRASYGVNGTQPKDYYGYMGVYEFGYNYNGNGGSSEARFYNPSLKWEKNYATNIG FT IDLTLFNRLTVSAEWYNRETKDLLMDKPISAAVGVINSSGVANMLVNVGSMRNRGFELE FT LKSTNIQNKDLLWTTSLNIGHNKNKLTKLDGEQQEIISGVSIHRVGQPYYSIYAYEYAG FT VDPQTGKELYYINGEDGSRETTTNSAAANKTIIGSIEPKVQGGLTNYVSWKFIDFNLTL FT TYSLGGHAYDYATWLQSNGGTYHYLGNVPAYYKMEDTWQKTGDNAKLPQFAYGNANKAS FT SRWLMSTDHLRVKNMTLGFTLPQSWSSKAGISKLRAYVSGNNLLTWKKKSLYVDPEVPV FT DGLCTFETPALRTVTFGLEIGF" FT misc_feature 715846..715908 FT /note="Signal peptide predicted for BF0594 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.976 between residues 21 and 22" FT repeat_region 716047..716106 FT /note="60 bp inverted repeat for invertible region CC" FT misc_feature 716173..716220 FT /note="PS00225 Crystallins beta and gamma 'Greek key' motif FT signature." FT misc_feature 716191..718878 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 13.6, E-value 8.1e-05" FT CDS 718899..720413 FT /transl_table=11 FT /locus_tag="BF9343_0568" FT /old_locus_tag="BF0595" FT /product="putative membrane protein" FT /note="Only similar to Bacteroides thetaiotaomicron FT database matches, such as putative outer membrane protein, FT probably involved in nutrient binding BT2365 SWALL:Q8A577 FT (EMBL:AE016935) (497 aa) fasta scores: E(): 2.6e-57, 38.56% FT id in 516 aa, and putative outer membrane protein, probably FT involved in nutrient binding BT3311 SWALL:Q8A2J4 FT (EMBL:AE016940) (506 aa) fasta scores: E(): 5.3e-12, 23.59% FT id in 534 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LHN3" FT /protein_id="CAH06347.1" FT /translation="MKKEFMKKIYKSITLVAAILSLSSCGNDWLDRKPADGIPSEDAIT FT NYNDALTARTGMYDGIQGNSNATSYYGARMFYYGDVRADDMQARTQGMRSSSCYEMLYT FT VDDAPNMWNIPYNVIRRANRLIEAINEKKVTDATEAQIGKIYSEALVVRALVHFDLVRI FT YGMPYTADNGASLGVPVIVKPLERNDLPSRNTVAEVYTQVITDLTDAINSGYLAKDQTP FT GYINEWAAKALLTRVYLTKGDNENALKVAEDIITNSPYKLWTNEEYVNAWYKSNGAHTN FT EMIFEVVNASNDDWTDRNGIAYLLNENGYADAIVTKSFMNMLSQDPKDVRIGMVLPAQY FT DKDLQEEYGDAKIFINKFPADKDDVGEMRLNNLPLLRLSEVYLSAAEAAAKLGGHQDKA FT AKYLNEIVQRANPEAKAISEADATVERIILERRKEMIGEGQRYFDALRNNETIVRYKDE FT GDKGYHYSLIKESQSFDRTYFRAILPIPVDETNVNPNLRAQQNPGY" FT misc_feature 718899..718976 FT /note="Signal peptide predicted for BF0595 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.713 between residues 26 and 27" FT CDS <720940..723879 FT /transl_table=11 FT /locus_tag="BF9343_0569" FT /old_locus_tag="BF0596" FT /product="putative surface membrane protein" FT /note="Similar (although not the N-terminal region) to FT Porphyromonas gingivalis receptor antigen RagA SWALL:Q9ZA60 FT (EMBL:AJ130872) (1017 aa) fasta scores: E(): 5.8e-53, 27.4% FT id in 1018 aa, and to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT3090 SWALL:Q8A365 (EMBL:AE016938) (999 aa) fasta FT scores: E(): 5.8e-46, 31.69% id in 997 aa. Note: This CDS FT does not have a proper start codon, but the first 20 amino FT acids is a 60bp inverted repeat, marked for invertible FT region CC. This involves possible phase variation or a FT recombination site within this cluster with BF0594 that has FT a proper start codon with this 60bp inverted repeat further FT into the CDS" FT /db_xref="GOA:Q5LHN2" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LHN2" FT /protein_id="CAH06348.1" FT /translation="SSAKTLQISYIGMQTAEVAIAPNIRVILKTDSKALDEVVVVAYGT FT QSARTVTASVSTVRADALKDVPSVSFDQMLQGRASGVSITTPSAGVGQAPIVRVRGVNS FT ITSGTSPLYVVDGVPIESGNLSYLANANALADINPADIVSMDVLKDAAAAALYGSRAAN FT GVILITTKQGQSGKVKVSYDGFVGFSNATDFYEMMNAQEYVDFKNLAVKNRYGTDELSL FT TTGYVSPYGNKAFNMMKDANGNYVDTDWKDAAFQNGLSQSHSVAVSGGSDKVRYYLSGN FT YTTQEGIVKGDKYDRLGVKANINVQATDWLKVGMNTNVTTGTTSYVDAARRGSNFAVGG FT FPRLALINAPNLPMYNEDGTPYYLAQGLGYGGNTVFSTFSNPAAILSLGNGLSSDVTRF FT IGVFYAEATPLKGLSLKTQYGVDYARIEEQRFWSPLHGDGVNSKGLANAYNTKNNRWTW FT TNTATYNFSLGQNNFNLLAGTEASERNNSRWTAQRKDLQDDKFVVFQGPFGSATAGGSL FT SNNTMVSYFGRINYDYASKYIVSLNYRRDGYSALSEKNRWGNFGGVSAAWRVSEEGFFK FT PLRNVVDDLKIKGSYGVVGNTDIYDYASKSFYSSYNYGINGTYGLAQIADPNLKWESSE FT KYSIGFNARLLDRISVDFDYYYTKSSDLILDVPQSPSKGIPGNIITTNAGKMKNSGIEL FT TVSADVIRNSQFTWETSFNITTNKNKVISLADGVENILKGDNGGLEITNITVPGKSIGR FT LYLYPTAGVDPKSGRRVFITPEGDRTLLMFEKGGWFYEDGTEYAGEFEPVDCGNTLPTW FT YGGWTNNFKYKGFDLSLFFQFSGGNKIYNGTKASVSDMRYWNNSKDVYKKYWTPERTHA FT EYPMPIYGDNYSNGSALPISDLVERGDYLRLKNVSLGYTFNTKNWSKAVGISALRLYVQ FT AQNLFVITGYSGMDPETLTNVESATLSGGTDKNTLPQARTYTIGVNLTF" FT repeat_region 720940..720999 FT /note="60 bp inverted repeat for invertible region CC" FT misc_feature 721084..723876 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 11.1, E-value 9.3e-05" FT CDS 723914..725308 FT /transl_table=11 FT /locus_tag="BF9343_0570" FT /old_locus_tag="BF0597" FT /product="putative membrane protein" FT /note="Only similar to Bacteroides thetaiotaomicron FT database entries, such as putative outer membrane protein, FT probably involved in nutrient binding BT1439 SWALL:Q8A7T5 FT (EMBL:AE016931) (493 aa) fasta scores: E(): 1e-10, 27.17% FT id in 449 aa, and putative outer membrane protein, probably FT involved in nutrient binding BT2269 SWALL:Q8A5H0 FT (EMBL:AE016935) (469 aa) fasta scores: E(): 1.4e-09, 26.59% FT id in 485 aa" FT /db_xref="GOA:Q5LHN1" FT /db_xref="InterPro:IPR012944" FT /db_xref="PDB:3L22" FT /db_xref="UniProtKB/TrEMBL:Q5LHN1" FT /protein_id="CAH06349.1" FT /translation="MKKIILFSTLCASLFLGSCSSSFLDQEPPLYVNENDIFTSPTRIE FT ATLNGLYAAIKNTGTKSLMGGKSYLVFDNRGDDVINISNNLVTLFNTYNMNVGITDAEN FT ADTWTYAYLAINKVNTFLQSLEGAREVAGENYDRYVQEAKFVRALAYYYLNNLYPTPYS FT VNPDAKSVPLRLTAEAGTENNNMPRSTVKQIYEHILSDLENISALDTEVNTYTGVTHAT FT QAAANMLKMRVYMAMNEWDKAITAGELVTGYSLPEDVTLIYKAPYFSQESIFSLPMADT FT NIPNTQQSLAEYYYDGKIMLIDTKSGIMSKPDYSLATDKRIIAFKGEKDLLMKFTDAKT FT KLQWVPIFRYAETLLDLAECYANKAGGEATAKSLLKQVRGRSVDAATDPLNIDNLSGDA FT LKEAIYNEKRLEFIGEGIRGIDIMRRGEHFIKVGENETINVGPSDEKYTWPIPQVELLL FT NKDINK" FT misc_feature 723914..723985 FT /note="Signal peptide predicted for BF0597 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.771 between residues 24 and 25" FT misc_feature 723938..723970 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 725425..726678 FT /transl_table=11 FT /locus_tag="BF9343_0571" FT /old_locus_tag="BF0598" FT /product="putative GTP-binding protein" FT /note="Similar to Escherichia coli GTP-binding protein HflX FT or B4173 SWALL:HFLX_ECOLI (SWALL:P25519) (426 aa) fasta FT scores: E(): 1e-37, 44.37% id in 338 aa, and to Bacteroides FT thetaiotaomicron GTP-binding protein BT2258 SWALL:AAO77365 FT (EMBL:AE016935) (419 aa) fasta scores: E(): 5.6e-132, FT 96.65% id in 419 aa, and to Chlorobium tepidum GTP-binding FT protein HflX or CT1384 SWALL:Q8KCN0 (EMBL:AE012896) (441 FT aa) fasta scores: E(): 1.9e-41, 46.74% id in 415 aa" FT /db_xref="GOA:Q5LHN0" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR016496" FT /db_xref="UniProtKB/TrEMBL:Q5LHN0" FT /protein_id="CAH06350.1" FT /translation="MKEFVISEAKVETAVLVGLITQTQDERKTNEYLDELAFLAETAGA FT EVVKRFTQKLPTANSVTYVGKGKLEEIKEYIRIEAEEDREVGMVIFDDELSAKQIRNIE FT AELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLPRLQRLWTHLERQGGGSGS FT GKGGSVGLRGPGETQLEMDRRIILNRMSLLKERLAEIDKQKSTQRKNRGRMIRVALVGY FT TNVGKSTMMNLLAKSEVFAENKLFATLDTTVRKVIIDNLPFLLSDTVGFIRKLPTDLVD FT SFKSTLDEVREADLLVHVVDISHPGFEEQIEVVNKTLADIGGGGKPMILIFNKIDAYTY FT VEKAPDDLTPKTKENLTLEELMKTWMAKMEDNCLFISAREKINIDELKSVVYQRVKELH FT VQKYPYNDFLYQTYEEEE" FT misc_feature 726085..726108 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 726703..728694 FT /transl_table=11 FT /locus_tag="BF9343_0572" FT /old_locus_tag="BF0599" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2257 SWALL:AAO77364 (EMBL:AE016935) FT (663 aa) fasta scores: E(): 0, 88.48% id in 660 aa, and to FT Treponema pallidum hypothetical protein Tp0851 FT SWALL:Y851_TREPA (SWALL:O83823) (724 aa) fasta scores: E(): FT 3e-13, 24.54% id in 599 aa" FT /db_xref="GOA:Q5LHM9" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:Q5LHM9" FT /protein_id="CAH06351.1" FT /translation="MGKTYRRLTEDEVLQLKSQSCLADDWNKVAVAEEFTTEFVHHTRF FT SGEVKLGVFHSDFILPGGIKKHSGLRHVTLHNVTVGDNCCIENIQNYIANYEIGNNTFI FT ENVDIILVDGLTQFGNGVETAVLNETGGREVLINDKLSAHQAYILALYRHRPELISRMK FT EITDYYSNKHASAVGTIGNHVMILNTGSIKNVRIGDFCRICGTCRLYNGSINSNESAPV FT HIGHGVICDDFIISSGSHVDDGAMLTRCFVGQACQLGHNYSASDSLFFSNCQGENGEAC FT AIFAGPYTVTHHKSTLLIAGMFSFMNAGSGSNQSNHMYKLGPIHQGTLERGAKTTSDSY FT ILWPARVGAFSLVMGRHVNHADTSNLPFSYLIEQQNTTYLVPGVNLRSVGTIRDAQKWP FT KRDKRTDPNRLDYINYNLLSPYTIQKMFKGRSILKELKRVSGETSEIYSYQSAKIKNSS FT LNSGIRYYEIAIHKFLGNSIIKRLEGINFKDNEEIRRRLKPDTEIGVGEWVDIAGLIAP FT KSEVEKLIDGIESGEINRLKSMNACFAAMHDNYYTYEWTWAYHKIQEFYGLNPETITAK FT DIIAIVRAWREAVVGLDRMVYDDARKEFSLSSMTGFGADGSRDEMKLDFGQVRGDFESN FT PFVTAVLKHIDDKTALGEELINRIGQLA" FT misc_feature 727624..727698 FT /note="PS00583 pfkB family of carbohydrate kinases FT signature 1." FT CDS 728748..731237 FT /transl_table=11 FT /locus_tag="BF9343_0573" FT /old_locus_tag="BF0600" FT /product="putative aminopeptidase" FT /note="Similar to Streptomyces lividans aminopeptidase N FT PepN SWALL:AMPN_STRLI (SWALL:Q11010) (857 aa) fasta scores: FT E(): 1.8e-35, 27.8% id in 651 aa, and to Streptomyces FT avermitilis putative aminopeptidase N PepN or sav5395 FT SWALL:Q82CF5 (EMBL:AP005042) (857 aa) fasta scores: E(): FT 5.7e-36, 28.41% id in 651 aa, and to Streptomyces FT coelicolor aminopeptidase N PepN or sco2643 or sc8e4a.13 FT SWALL:Q9L1Z2 (EMBL:AL939113) (857 aa) fasta scores: E(): FT 1.8e-35, 27.8% id in 651 aa" FT /db_xref="GOA:Q5LHM8" FT /db_xref="InterPro:IPR001930" FT /db_xref="InterPro:IPR014782" FT /db_xref="InterPro:IPR024571" FT /db_xref="UniProtKB/TrEMBL:Q5LHM8" FT /protein_id="CAH06352.1" FT /translation="MIGFILLSGCNRAAEKNPRFYDAGVSRELAGHRKAQIKNLKYELS FT FNIPRQKEAAIEGDITLRFDLASRQEVLIDFREEREKIKEVIANGVPVDKVRFENEHII FT LPASSTVEGANGIRIRFTAGNQSLNRNDEYLYTLLVPDRARTVFPCFEQPNLKAEFTLQ FT LELPADWKAVSNTYIRSETVTDDRKTVCFAPTEPLSTYLFSFVAGKLERREYTRDGRTI FT AAYYRETDPKKVAQLDIVFGQVMASLHWLEEYTGIAYPFAKYDFIVLPGFQFGGMEHTG FT ATLYNDNGIFLSEHPTPDEELNRAELIAHETSHMWFGDLVTMDWFDDVWTKEVFANYFA FT ARIVEPLFPEINHTQNKLKTFTAASLSEDRTMGTNAIRQPLDNLRNAGLIYGQIIYNKA FT PVMMEKLVDKMGETNFRSGIQEYLKTYSYDNATWDDLIRILDSKTTEDLAAFSDVWVNR FT KGMPTLTFRTDGQELEIRQHDPYNRGLFWPQRFAVTLCGERDSVIRVNMTDTLFRMQLP FT FVPSRVLPNTDGRGYGVFVPDEPALHWLAAHWWEIEDDTARQSLLMVLYENYLAKHISA FT DDWVNSLITGLPAEKNALVASTASGYLANVMWEIAPANRAEVEARIYTMTQNHPLPSCR FT IQLMRLFMQNAISEPMVKKLYILWQQQSDKHLNRQDYTTLAYELAIRMPLESEQILRTQ FT RARIDDPDRLRQFDFISRAAVSDTARLDTLFNSLLAAENRRIEPWTTAVIRYLNHPLRE FT DQSVKYIRPGLEVLEEVQRTGDIFFPKNWAAALLGNHLGSSAYEEVVRFLNERPDYSPL FT LKNKILQAAYPLYRANN" FT misc_feature 728844..729944 FT /note="Pfam match to entry PF01433 Peptidase_M1, Peptidase FT family M1, score 170.2, E-value 3e-48" FT CDS 731661..733307 FT /transl_table=11 FT /gene="fumB" FT /locus_tag="BF9343_0574" FT /old_locus_tag="BF0601" FT /product="putative fumarate hydratase class I, anaerobic" FT /EC_number="4.2.1.2" FT /note="Similar to Escherichia coli fumarate hydratase class FT I, anaerobic FumB or B4122 SWALL:FUMB_ECOLI (SWALL:P14407) FT (548 aa) fasta scores: E(): 5.8e-170, 76.96% id in 547 aa, FT and to Bacteroides thetaiotaomicron fumarate hydratase FT class I, anaerobic BT2256 SWALL:AAO77363 (EMBL:AE016935) FT (544 aa) fasta scores: E(): 6.3e-209, 95.01% id in 542 aa, FT and to Escherichia coli O6 fumarate hydratase class I, FT anaerobic FumB or C5127 SWALL:Q8FAU2 (EMBL:AE016771) (548 FT aa) fasta scores: E(): 5.1e-171, 77.14% id in 547 aa" FT /db_xref="GOA:Q5LHM7" FT /db_xref="InterPro:IPR004646" FT /db_xref="InterPro:IPR004647" FT /db_xref="InterPro:IPR011167" FT /db_xref="InterPro:IPR020557" FT /db_xref="UniProtKB/TrEMBL:Q5LHM7" FT /protein_id="CAH06353.1" FT /translation="MATPPFKYQPMFEHGEDKTEYYLLTKDYVSVSEFEGTPVLKVQKE FT GLTAMANTAFRDVSFMLRRAHNEQVAKILSDPEASENDKYVALTFLRNAEVAAKGILPF FT CQDTGTAIIHGEKGQQVWTGYCDEEALSLGVYKTYTEENLRYSQNAPLNMYDEVNTKCN FT LPAQIDIEATEGMEYKFLCVTKGGGSANKTYLYQETKAILNPGTLVPFLVEKMKTLGTA FT ACPPYHIAFVIGGTSAEKNLLTVKLASTHYYDELPTTGNEYGRAFRDVELEKEVLAEAQ FT KIGLGAQFGGKYLAHDVRIIRLPRHGASCPVGLGVSCSADRNIKCKINKDGIWIEKLDS FT NPGSLIPAELRGAGEGDVVKIDLNQPMADILKELTKYPVATRLSLNGTIIVGRDIAHAK FT LKERLDRGEDLPQYIKDHPIYYAGPAKTPAGMACGSMGPTTAGRMDPYVDLFQSHGGSM FT IMLAKGNRSQQVTDACKKYGGFYLGSIGGPAAILAQNNIKSIECVEYPELGMEAIWKIE FT VEDFPAFILVDDKGNDFFKQIKPRCGSCSNK" FT misc_feature 731697..733145 FT /note="Pfam match to entry PF00206 lyase_1, Lyase, score FT 164.6, E-value 1.4e-46" FT misc_feature 733026..733055 FT /note="PS00163 Fumarate lyases signature." FT CDS 733440..734585 FT /transl_table=11 FT /locus_tag="BF9343_0575" FT /old_locus_tag="BF0602" FT /product="putative transmembrane acyl-transferase protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2255 SWALL:AAO77362 (EMBL:AE016935) FT (386 aa) fasta scores: E(): 6.9e-130, 80.15% id in 378 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT1850 SWALL:AAO76957 (EMBL:AE016933) (362 aa) FT fasta scores: E(): 3.6e-26, 31.44% id in 388 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT4450 SWALL:AAO79555 (EMBL:AE016945) (411 aa) fasta FT scores: E(): 7.1e-22, 50.99% id in 404 aa, and to Ralstonia FT solanacearum hypothetical transmembrane protein RSC3292 or FT RS02521 SWALL:Q8XUA1 (EMBL:AL646074) (336 aa) fasta scores: FT E(): 2.8e-07, 28.99% id in 369 aa" FT /db_xref="GOA:Q5LHM6" FT /db_xref="InterPro:IPR002656" FT /db_xref="UniProtKB/TrEMBL:Q5LHM6" FT /protein_id="CAH06354.1" FT /translation="MELQKNPQHIVWLDVVRFVAMFTVVCCHCTDPFNFYPGTPPNIGE FT IKLWGAIYGALLRPCVPLFVMITGALLLPVRGEISVFYKKRIPRVLWPFLIWSVIYNLF FT PWITGVLGIKPEVILDFFPYSGEEVMRQSLPVSLDYIAQIPFNFSIVDVHMWYIYLLIG FT LYLYLPVFSAWVEKASDKAKLWFLGAWAVTLLLPYYNQFVAQYLWGTCSWNAFGMLYYF FT AGFNGYLLLGHYLRNLDWSLGKILAIGLPMFVIGYAVTFFGFRYITALPEFSDEMLELF FT FTYCSLNVVMMTIPVFMLCKKVNFHSEGIRKALANLTLCGFGIYMIHYFFTGPSVVLVR FT TLGVPLGIQIPVASVFAFGASWLIVWTVYRVLGKKAKWIMG" FT misc_feature 733461..734564 FT /note="Pfam match to entry PF01757 Acyl_transf_3, FT Acyltransferase family, score -39.0, E-value 4.3e-05" FT misc_feature order(733476..733544,733602..733670,733707..733775, FT 733896..733964,733989..734048,734076..734144, FT 734175..734243,734271..734339,734376..734435, FT 734478..734546) FT /note="10 probable transmembrane helices predicted for FT BF0602 by TMHMM2.0 at aa 13-35, 55-77, 90-112, 153-175, FT 184-203, 213-235, 246-268, 278-300, 313-332 and 347-369" FT CDS 734610..736766 FT /transl_table=11 FT /locus_tag="BF9343_0576" FT /old_locus_tag="BF0603" FT /product="putative alpha-N-acetylglucosaminidase" FT /note="Similar to Homo sapiens FT alpha-N-acetylglucosaminidase precursor NagLU or ufhsd1 FT SWALL:ANAG_HUMAN (SWALL:P54802) (743 aa) fasta scores: E(): FT 2.2e-74, 35.35% id in 724 aa, and to Bacteroides FT thetaiotaomicron alpha-N-acetylglucosaminidase precursor FT BT4359 SWALL:Q89ZL8 (EMBL:AE016945) (744 aa) fasta scores: FT E(): 3.2e-176, 56.25% id in 736 aa, and to Clostridium FT perfringens probable alpha-N-acetylglucosaminidase CPE0866 FT SWALL:Q8XM24 (EMBL:AP003188) (2104 aa) fasta scores: E(): FT 8.6e-100, 37.62% id in 707 aa" FT /db_xref="InterPro:IPR007781" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR024240" FT /db_xref="InterPro:IPR024732" FT /db_xref="InterPro:IPR024733" FT /db_xref="UniProtKB/TrEMBL:Q5LHM5" FT /protein_id="CAH06355.1" FT /translation="MNRKSILLTILLCVASWAMASPVTGLLERIDKGASKKFIIEQVKS FT DADFFELDQKGDKVVIRGNNYVSIATGLNWYLKYYAGIHLSWNGMQAKLPAVLPPVTKK FT ERRETTLPYRYDLNYCTFSYSMAFWDWNRWEKEIDWMALHGINIPLAVTGAEAVWHNVL FT DKLGYTKTEINEFISGPGFFAWWLMNNLEGWGGPNPDSWYTRQIALQKKILKRMREYGI FT EPVLPGYCGMVPHNAKEKLGLNVSDPGTWCGYRRPAFLQPSDPRFEEISSLYYKELEKL FT YGKANFYSMDPFHEGGNTAGVDLDAAGKAVMKAMKKANPKAVWVAQAWQANPRPKMIEN FT LKAGDLLILDLTSECRPQWGDSTSEWYRKNGYGQHDWIYCMLLNYGGNVGLHGKMDNVI FT DNFYLAKADPHASATLKGVGMTPEGIENNPVMYELVMELPWRPDRFTKEEWLKEYVKAR FT YGVDDPVVQAAWTNLANSIYNSPKNLTQQGTHESVFCARPAEDVYQVSSWSEMKDYYRP FT QEVIEAARLMVSVADRFKGNNNFEYDLVDIVRQALAEKGRLMQKAVTAAYRAGDKQLFA FT LASGKFLDLILLQDKLLGTRPEFRVGKWIEEARALGDTPEEKELYEWNARVQITTWGNR FT NAADYGGLRDYAHKEWNGLLKDFYYMRWKLYFDFLSQRIEGKTPAEIDFYAIEEPWTKA FT ANPYSAEAEGDCIEVAKQVMQAVE" FT misc_feature 734610..734669 FT /note="Signal peptide predicted for BF0603 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.859 between residues 20 and 21" FT misc_feature 734622..734690 FT /note="1 probable transmembrane helix predicted for BF0603 FT by TMHMM2.0 at aa 5-27" FT misc_feature 734766..736760 FT /note="Pfam match to entry PF05089 NAGLU, FT Alpha-N-acetylglucosaminidase (NAGLU), score 566.0, E-value FT 2e-167" FT CDS complement(736859..738526) FT /transl_table=11 FT /locus_tag="BF9343_0577" FT /old_locus_tag="BF0604" FT /product="putative amino acid transporter" FT /note="Similar to Bacillus cereus putative amino acid FT transporter YfnA protein SWALL:Q9K318 (EMBL:AJ007795) (471 FT aa) fasta scores: E(): 7e-47, 39.7% id in 481 aa, and to FT Xanthomonas axonopodis cationic amino acid transporter YhdG FT or Xac1841 SWALL:Q8PLF9 (EMBL:AE011817) (476 aa) fasta FT scores: E(): 1.1e-86, 46.89% id in 467 aa, and to FT Xanthomonas campestris cationic amino acid transporter YhdG FT or XCC1821 SWALL:Q8P9N2 (EMBL:AE012284) (476 aa) fasta FT scores: E(): 1.3e-85, 46.25% id in 467 aa" FT /db_xref="GOA:Q5LHM4" FT /db_xref="InterPro:IPR002293" FT /db_xref="InterPro:IPR004841" FT /db_xref="UniProtKB/TrEMBL:Q5LHM4" FT /protein_id="CAH06356.1" FT /translation="MGLFIKKPFEALLAEANVSGSKSLKRVLGPWSLVALGVGVIIGAG FT LFSITGTVAAGYTGPAITLSFAIAALGCCFAGLCYAEFASMIPVAGSAYTYSYATMGEL FT IAWIIGWDLVLEYTVAATTVSISWSRYLVVFLEGLDIHLPQALTACPWDGGIVNIPAFL FT IVVLMSIFLIRGTEGSSIFNGIVVFLKVSVIAIFVVLGWKYINADNYTPYIPANTGTLG FT EYGLSGVLRGAAIVFFAFLGFDAVSTAAQETKNPKRNMPIGILVSLLVCTVLYMLFAHV FT MTGVAHYTEFSGQQGIAPVAIAIEHMGHADATGIIHPDYPWLNRAIVLAILFGYCSVIM FT VTLLGQSRVFLSMSHDGLLPPFFSHINEKFRTPARSNLLFMLIVGLLAAFVPARLAGEM FT TSIGTLMAFTLVCAAVLVVRKTMPNIPRSFKTPFVPLVPILGILTCLCMMLFLPADTWI FT RLVLWMLIGLDIYVGYGMKHSKLEHGVKNRRGQSALNMIGIALSLLCVITGLWHQQTVG FT WNESKALLIISFVFAFTHCAYYMMRIWKGTTKQTNDNG" FT misc_feature complement(order(736907..736960,736988..737047, FT 737105..737158,737168..737236,737273..737332, FT 737342..737401,737492..737551,737675..737743, FT 737777..737845,737921..737989,738008..738067, FT 738149..738217,738275..738343,738380..738448)) FT /note="14 probable transmembrane helices predicted for FT BF0604 by TMHMM2.0 at aa 27-49, 62-84, 104-126, 154-173, FT 180-202, 228-250, 262-284, 326-345, 376-395, 399-418, FT 431-453, 457-474, 494-513 and 523-540" FT misc_feature complement(737090..738457) FT /note="Pfam match to entry PF00324 aa_permeases, Amino acid FT permease, score -104.3, E-value 8.2e-08" FT CDS complement(739054..740379) FT /transl_table=11 FT /locus_tag="BF9343_0578" FT /old_locus_tag="BF0606" FT /product="putative outer membrane protein" FT /note="Similar to Acinetobacter baumannii AdeC outer FT membrane protein SWALL:Q93E18 (EMBL:AF370885) (465 aa) FT fasta scores: E(): 1.9e-07, 22.64% id in 424 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein TolC BT2253 SWALL:AAO77360 (EMBL:AE016935) (448 aa) FT fasta scores: E(): 2.6e-122, 73.92% id in 441 aa, and to FT Shewanella oneidensis agglutination protein AggA or so4320 FT SWALL:Q8E9G3 (EMBL:AE015865) (471 aa) fasta scores: E(): FT 3.6e-15, 22.78% id in 452 aa" FT /db_xref="GOA:Q5LHM3" FT /db_xref="InterPro:IPR003423" FT /db_xref="UniProtKB/TrEMBL:Q5LHM3" FT /protein_id="CAH06357.1" FT /translation="MKQIVLSIIALCCAPFAMQAQQPQIYTLKSCLEYGLQNNYSLQIV FT RNEEQVSRNNATPGNAGYLPTLDFTAGYKGTVDNTNTKVRATGESVKENGVFDQTLNVG FT LNLNWTIFDGFNITANYQKLKELQLQGETNTRIAIEDLIANLAAEYYNYVQQKIRLQNF FT RYAVSLSKERLRIVEERYHIGNFSRLDYQQAKVDFNADSAKYMKQQELLHTSRIQLNEL FT MANEDVDQPLVIEDSIIKVNAGLRFEELWNATLLTNASLLKAEQNNTLAMLDYKKVNSR FT NYPYLKMNTGYGYTFNKYDIAANSQRGNLGANLGVTVGFNIFDGNRRREKNNARIAIKN FT ARLQREQLEQGLKADLSNLWQAYQNNLQMLKLERQNLVAAKENHEIAMERYMLGNLSGI FT EMREAQKSLLDAEERILSAEYDTKLCEISLLQISGKITKYLE" FT misc_feature complement(739066..739641) FT /note="Pfam match to entry PF02321 OEP, Outer membrane FT efflux protein, score 51.9, E-value 1.2e-12" FT misc_feature complement(739675..740298) FT /note="Pfam match to entry PF02321 OEP, Outer membrane FT efflux protein, score 63.1, E-value 5.3e-16" FT misc_feature complement(740323..740379) FT /note="Signal peptide predicted for BF0606 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.992 between residues 19 and 20" FT CDS complement(740376..743411) FT /transl_table=11 FT /locus_tag="BF9343_0579" FT /old_locus_tag="BF0607" FT /product="putative AcrB/AcrD/AcrF family efflux FT transporter" FT /note="Similar to Escherichia coli multidrug transporter FT MdtC SWALL:BAC06609 (EMBL:AB089189) (1025 aa) fasta scores: FT E(): 1.6e-99, 30.47% id in 1027 aa, and to Bacteroides FT thetaiotaomicron multidrug efflux membrane fusion protein FT BT2252 SWALL:AAO77359 (EMBL:AE016935) (1010 aa) fasta FT scores: E(): 0, 92.87% id in 1010 aa, and to Vibrio FT cholerae multidrug resistance protein, putative vc0914 FT SWALL:Q9KTI8 (EMBL:AE004175) (1036 aa) fasta scores: E(): FT 3.6e-131, 37.51% id in 1013 aa" FT /db_xref="GOA:Q5LHM2" FT /db_xref="InterPro:IPR001036" FT /db_xref="UniProtKB/TrEMBL:Q5LHM2" FT /protein_id="CAH06358.1" FT /translation="MNISELSIRRPVLSTVLTIIILLFGLIGYNYLGVREYPSVDNPII FT SVSCSYPGANADVIENQITEPLEQNINGIPGIRSLSSVSQQGQSRITVEFELSVDLETA FT ANDVRDKVSRAQRYLPRDCDPPTVSKADADATPILMVALQSDKRSLLELSEIADLTVKE FT QLQTISDVSSVSIWGEKRYSMRLWLDPIKMSGYGITPIDVKNAVDKENVELPSGSIEGN FT TTELTIRTLGLMHTAEEFNNLIVKEENDRIIRFSDIGRAELGPADIKSYMKMNGVPMVG FT IVVIPQPGANHIKIADAVYERMEKMQKDLPEDVKYSYGFDNTKFIRASISEVKETVYVA FT FILVIIIIFLFLRDWRVTLVPCIVIPVSLIGAFFVMYLADFSINVLSMLAVVLAVGLVV FT DDAIVMTENIYVRIEKGMPPKEAGIEGAKEIFFAVISTTITLVAVFFPIVFMEGMTGRL FT FREFSIVISGSVIISSFAALTFTPMLATKLLVKREKQNWFYLKTEPFFEGMNRLYSRSL FT AVFLHKRWIALPFVAITIGIIAFLWNYIPAEMAPLEDRSQISINTRGAEGVTYEYIRDY FT TEDINDLVDSIVPDAESVTARVSSGSGNVRITLKDMKDRDYTQMDVAEKLSAAVQKKTM FT ARSFVQQSSSFGGRRGGMPVQYVLQATNIEKLQEVLPKFMAKVYENPVFQMADVDLKFS FT KPEARININRDKASIMGVSTRNIAQTLQYGLSGQRMGYFYMNGKQYEILGEINRQQRNT FT PANLKSIYIRSDKGDMVQLDNLIELTGGIAPPKLYRYNRFVSATVSAGLAEGKTIGQGL FT DEMDKIAKETLDDTFRTALTGDSKEYRESSSSLMFAFILAIVLIYLILAAQFESFKDPL FT IIMLTVPLAIAGALVFMYFGGITMNIFSQIGIIMLIGLVAKNGILIVEFANLKQETGED FT KMTAIKDAALQRLRPILMTSASTILGLIPLAFASGEGCNQRIAMGTAVVGGMLVSTLLT FT MYIVPAIYSYISTNRSNKLKQE" FT misc_feature complement(740409..743405) FT /note="Pfam match to entry PF00873 ACR_tran, AcrB/AcrD/AcrF FT family, score 1107.2, E-value 0" FT misc_feature complement(order(740412..740480,740523..740591, FT 740652..740720,740733..740801,740820..740879, FT 741771..741839,741960..742028,742056..742124, FT 742179..742247,742275..742343,742356..742409, FT 743310..743378)) FT /note="12 probable transmembrane helices predicted for FT BF0607 by TMHMM2.0 at aa 12-34, 335-352, 357-379, 389-411, FT 430-452, 462-484, 525-547, 845-864, 871-893, 898-920, FT 941-963 and 978-1000" FT misc_feature complement(740991..741014) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(743426..744508) FT /transl_table=11 FT /locus_tag="BF9343_0580" FT /old_locus_tag="BF0608" FT /product="putative HlyD-family efflux transporter FT component" FT /note="Similar to Bacteroides thetaiotaomicron putative FT membrane fusion protein precursor BT2251 SWALL:AAO77358 FT (EMBL:AE016935) (360 aa) fasta scores: E(): 4.8e-100, FT 79.72% id in 360 aa, and to Shewanella oneidensis HlyD FT family-related protein so1881 SWALL:Q8EFT5 (EMBL:AE015631) FT (360 aa) fasta scores: E(): 5.3e-20, 29.86% id in 298 aa, FT and to Pseudomonas aeruginosa probable RND efflux membrane FT fusion protein precursor pa4206 SWALL:Q9HWH5 FT (EMBL:AE004837) (370 aa) fasta scores: E(): 7.1e-20, 30.27% FT id in 370 aa" FT /db_xref="GOA:Q5LHM1" FT /db_xref="InterPro:IPR006143" FT /db_xref="UniProtKB/TrEMBL:Q5LHM1" FT /protein_id="CAH06359.1" FT /translation="MDKKVKWGIVILVGAGLIGWGIYSRLPKANEELAAADKVMTGKQI FT NKRVLNVNAKIIKPQLLTDQIQISGSLMPDEEVDLSFETSGKIVEINFDEGTTVKKGQL FT LAKVNDRQLQAQLQRLVAQLKLAEDRVFRQNALLERDAVSKEAYEQVKTELATLNADID FT LVKANIAMTELRAPFDGVIGLRQVSVGSYASPTTIVAKLTKIIPLKIEFSVPERYASQV FT KKGTNLNFELEGKLSSFPAKVYATESRIDQSTRTLTVRALYANSNGAILPGRYASIQLK FT KEEIPNAIAIPSESIVPEMGKDKVFLYKSGKAEPVEITAGIRTEAEVQVIKGLQMGDTI FT ITSGTLQLRTGLPVTLDNIN" FT misc_feature complement(743483..744283) FT /note="Pfam match to entry PF00529 HlyD, HlyD family FT secretion protein, score 45.3, E-value 1.2e-10" FT misc_feature complement(744437..744490) FT /note="1 probable transmembrane helix predicted for BF0608 FT by TMHMM2.0 at aa 7-24" FT CDS complement(744612..745925) FT /transl_table=11 FT /locus_tag="BF9343_0581" FT /old_locus_tag="BF0609" FT /product="putative HlyD-family transporter" FT /note="Similar to Pasteurella haemolytica leukotoxin FT secretion protein D LktD SWALL:HLYD_PASHA (SWALL:P16534) FT (478 aa) fasta scores: E(): 3.8e-12, 23.58% id in 424 aa, FT and to Bacteroides thetaiotaomicron putative hemolysin FT secretion protein BT4289 SWALL:AAO79394 (EMBL:AE016944) FT (416 aa) fasta scores: E(): 2.3e-25, 26.85% id in 417 aa, FT and to Pasteurella haemolytica LktD SWALL:Q934A1 FT (EMBL:AF314503) (472 aa) fasta scores: E(): 7.2e-12, 23.84% FT id in 411 aa" FT /db_xref="GOA:Q5LHM0" FT /db_xref="InterPro:IPR003997" FT /db_xref="UniProtKB/TrEMBL:Q5LHM0" FT /protein_id="CAH06360.1" FT /translation="MSKIQLRQVYRDQLYNYRPTWILRWGITIFFVFLLLVISVSGFIR FT YPDIVPATVEITTINPPANLISKVNGKIEIIFTEEGESITKGQVLAILESPAQWKDMKI FT LDHYITVLENTIGKDSLSVIPEPDFLRNDLELGEVQGRYADLKLNYTELYNFLHSGLFE FT EEVLSLQEKKQAQKQLLVQENRKRELLKTQIRLADKEYQRDSILFVKEVISESEIEQRH FT QNRLQFQSSLVDMEVNILNIKSSLKQLRSDLKKIELKHNTDRQELTNKLLQSTHLLKAQ FT TETWKQNYLITTPIDGKVSFTTYWSKNQNVKSGELIFSVVPIDSMTTKARLQFPIQNSG FT KIKEGQQVNIKLQNYPYQEFGMLVGHLSKISEVPNELLYSADVVLDKGLITSYGKRLPK FT VQQLKGDAEILTDDLSLLMRFFNPLRAIFDHRLRKHNQ" FT misc_feature complement(745797..745865) FT /note="1 probable transmembrane helix predicted for BF0609 FT by TMHMM2.0 at aa 21-43" FT CDS complement(745937..748108) FT /transl_table=11 FT /locus_tag="BF9343_0582" FT /old_locus_tag="BF0610" FT /product="putative ATP-binding transporter component" FT /note="Similar to Riemerella anatipestifer ABC transporter FT SWALL:Q9AM85 (EMBL:AF327734) (678 aa) fasta scores: E(): FT 1.2e-88, 38.49% id in 665 aa, and to Bacteroides FT thetaiotaomicron ABC transporter ATP-binding protein BT4288 FT SWALL:AAO79393 (EMBL:AE016944) (741 aa) fasta scores: E(): FT 4.4e-125, 45.31% id in 726 aa, and to Anabaena sp. ABC FT transporter ATP-binding protein Alr1927 SWALL:Q8YVP7 FT (EMBL:AP003587) (1011 aa) fasta scores: E(): 6.9e-73, 33.1% FT id in 725 aa" FT /db_xref="GOA:Q5LHL9" FT /db_xref="InterPro:IPR001140" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR005074" FT /db_xref="InterPro:IPR011527" FT /db_xref="InterPro:IPR017871" FT /db_xref="InterPro:IPR017940" FT /db_xref="UniProtKB/TrEMBL:Q5LHL9" FT /protein_id="CAH06361.1" FT /translation="MRINFPSYIQHDQMDCGPACLKIIAQNYGKRFSLKYLRDRCYATR FT EGVSLFDIGRAAEEIGFRTLAIKVTFEDLIEKMPLPLIVHWKQSHFVVVHKITNRKVYI FT SDPAQGLTHYNHKEFREAWEMCNGLGTIMILETTPEFHNMNEMETRASFSHFMKYLKPH FT HRYLGQVIVGMVAGILIGLLSPFISQSIVDFGIGSGNIQFVNTMLIAGMILAFSSMASD FT FIQSRLMLYVSERINMGMVSDFLRKTMSLPITFFERKMVSDLLTRIDDHGRIQSFIMST FT FLGIFINILLFVIYSLLMLYYESNMFLVFMIGNTVYTGWIFLFLKQRKKLDNQLFGCRA FT TNQNDLLELLENVNEIKINNIANKRRWKWELSRFKIYGLRVKNMNLDQIEATGASFIIH FT LQGLFITYIAALNVIEGTMTLGMMMAAQYILGQLNAPIKSMIGYVHSLQFARISLKRVN FT EVIWEEEPEISESKVSIPIEKGIKVKDLDFYYNPNLNKVLDNINLEIPEGKITAIVGES FT GSGKTTLLKLLLRFYKPTNGEIEVGGVPLDNIDLYRWRNSCGAVLQDGKLFNDTILYNI FT TLEDEEMNVNQKQLVKAIQLANAENFINARPLKLYTPLGTNGSGLSQGQKQRILIARAI FT YKNPDFIFLDEATNSLDTNNEKQISKNLETILEGKTAIVIAHRLSTVKNAHNIVVMEKG FT KIVEQGTHQELINLKGIYYDLISSQLEIG" FT misc_feature complement(746027..746587) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 192.6, E-value 5.2e-55" FT misc_feature complement(746204..746248) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(746543..746566) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(746798..747610) FT /note="Pfam match to entry PF00664 ABC_membrane, ABC FT transporter transmembrane region, score 40.5, E-value FT 3.2e-09" FT misc_feature complement(order(746867..746935,747134..747187, FT 747215..747283,747449..747517,747545..747613)) FT /note="5 probable transmembrane helices predicted for FT BF0610 by TMHMM2.0 at aa 166-188, 198-220, 276-298, 308-325 FT and 392-414" FT misc_feature complement(747689..748087) FT /note="Pfam match to entry PF03412 Peptidase_C39, Peptidase FT C39 family, score 132.5, E-value 6.4e-37" FT CDS complement(748353..749072) FT /transl_table=11 FT /locus_tag="BF9343_0583" FT /old_locus_tag="BF0611" FT /product="putative transmembrane amino-terminal protease" FT /note="Similar to Bacillus halodurans hypothetical protein FT BH0560 SWALL:Q9KFC4 (EMBL:AP001508) (237 aa) fasta scores: FT E(): 4.3e-06, 28.16% id in 213 aa, and to Oceanobacillus FT iheyensis hypothetical conserved protein ob0654 FT SWALL:Q8ESI0 (EMBL:AP004595) (232 aa) fasta scores: E(): FT 0.00012, 24.2% id in 219 aa" FT /db_xref="GOA:Q5LHL8" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:Q5LHL8" FT /protein_id="CAH06362.1" FT /translation="MKKIYLFLSFLIVILAYPLISLLTVLIIGNLVQNTTPWIRPMTLF FT SLATFILIFRKNIRCHSSFNRSLSLKTILSVCILTISMCIAIGMITPIPQNISLAKQEL FT LNFPRFIYSLFLIPILEELCFRIIIINKFKGKMNQWIIITGTALLFGIIHTSSIYTMIS FT MACFGFILAYLYVKSENGFLLILVHSLYSISVYCSYSVFWSITSRVLNYVYSPIYYIIV FT AISIMYIIYFFLKKKYV" FT misc_feature complement(order(748377..748445,748464..748532, FT 748560..748628,748686..748745,748788..748856, FT 748911..748964,748992..749060)) FT /note="7 probable transmembrane helices predicted for FT BF0611 by TMHMM2.0 at aa 5-27, 37-54, 73-95, 110-129, FT 149-171, 181-203 and 210-232" FT misc_feature complement(748476..748751) FT /note="Pfam match to entry PF02517 Abi, CAAX amino terminal FT protease family, score 54.8, E-value 1.6e-13" FT misc_feature complement(748974..749072) FT /note="Signal peptide predicted for BF0611 by SignalP 2.0 FT HMM (Signal peptide probability 0.954) with cleavage site FT probability 0.426 between residues 33 and 34" FT CDS complement(749158..749496) FT /transl_table=11 FT /locus_tag="BF9343_0584" FT /old_locus_tag="BF0612" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHL7" FT /protein_id="CAH06363.1" FT /translation="MKKLNINKLSEYPVVNIEEQTSLKGGVSQDEFFRMLENNTWQGGY FT VDGYGYAAPAVTIYGTSWNETGRWDIDGCPACGNGLGYDQTKPKPEHDIVTIWTHFFCH FT KHIYYGSK" FT CDS complement(749725..751287) FT /transl_table=11 FT /locus_tag="BF9343_0585" FT /old_locus_tag="BF0614" FT /product="possible glycosyl transferase" FT /note="no significant database matches" FT /db_xref="GOA:Q5LHL6" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q5LHL6" FT /protein_id="CAH06364.1" FT /translation="MNVNKPTTEKKLIDLNNDIIHNFDVSIVMSFYKRYTEFRKVLPHN FT APYLQRNGIEVIIVLDDPDEKSELLMLLQNYPFINWKLIINERKHAPRNHASVLNVGLK FT HATKKYILQIDPEVEFLTDIIWQMRDAIEKYPMHYILAMMAYVPYEQELTENNIKELDF FT IPWGNLMVERNHLYKLHGYDETFITWGGEDNNMRARLDMSGIKKFILPEAKTIHREKNY FT DPNERSKRINKHSISDWRKMNYPSEAIANKDIWGSEFNKVIYDWQDNQYAKDLCYTYLQ FT QFIGFEIRHPAAFRKRHKKIVLCQAYNEEKLIEGFLTNMANYFDGIILLDDESTDRTWD FT LAIHDKIILKVKKKRSGFNDLENRNILLDLSAFFQSEWFCFMDIDERFDERFTNFSEFE FT NNKEIHVVSFRGVYLWNDEQSYKGDIPNSNKGILTVYRMFRPIGHTHINTHKKLHFIAT FT PYFTNTWQSNILFKDYGSMKENDRIRKYERYIQEDQQKDMSSGYDYLLNSENLYQLDKI FT EEY" FT misc_feature complement(749863..750387) FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferase, score 11.4, E-value 0.00052" FT misc_feature complement(750664..751212) FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferase, score 10.2, E-value 0.00065" FT CDS complement(751284..752537) FT /transl_table=11 FT /locus_tag="BF9343_0586" FT /old_locus_tag="BF0615" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHL5" FT /protein_id="CAH06365.1" FT /translation="MKILFSLDVSNQRQVDFCNRILKILDNKDDSNDITLICKSQNHLS FT DYLYIPPSSHIKTEEAEIILTYGKTGLSHISQFARKSNIPIIHFINTEYLKDEYLSEDQ FT QVEKIILCDCFNQLLESFFQKDKMFVLPYFSIPVVTKNVEIRNKNSPKLLIAIAHPNLK FT NSPVYYISNLLNILSDYRITILYNGDPLIPIFNSNITLINVKESNIEKVILSNDIIIGD FT GISIYTGIMLGKPCIVIGEQGYGGLITPQNLSQQFANKFQGRIGGSLNEYIPLNLIMND FT IQYVQNTEKSKNIDCIIIKNKELLDNEYRQTQQSLNDLILEVAANHKQLYTFPMEIHLR FT LSDAFHLIKFSDTKFVLAYTANNKVHSSFGKEEAEIIALFKRSCLIKDAINMSPYKKEP FT KIFVEFIQMLFNEKILIA" FT CDS complement(752651..752869) FT /transl_table=11 FT /locus_tag="BF9343_0587" FT /old_locus_tag="BF0616" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHL4" FT /protein_id="CAH06366.1" FT /translation="MVRSIGESLSFISESITGQSATATFTKRENTALIYNRRDTAKESV FT TTQISTEYILFVSLFNNSKNGIAYRFF" FT CDS complement(753480..754412) FT /transl_table=11 FT /locus_tag="BF9343_0588" FT /old_locus_tag="BF0618" FT /product="putative ATP/GTP binding protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT GTPase BT2250 SWALL:AAO77357 (EMBL:AE016935) (310 aa) fasta FT scores: E(): 2.2e-99, 88.38% id in 310 aa, and to FT Chlorobium tepidum hypothetical protein CT1574 SWALL:Q8KC52 FT (EMBL:AE012913) (311 aa) fasta scores: E(): 8.1e-34, 39.1% FT id in 312 aa, and to Shewanella oneidensis conserved FT hypothetical protein Tigr00157 so0591 SWALL:Q8EJ79 FT (EMBL:AE015506) (354 aa) fasta scores: E(): 4.8e-29, 33.65% FT id in 309 aa" FT /db_xref="GOA:Q5LHL3" FT /db_xref="HSSP:1U0L" FT /db_xref="InterPro:IPR004881" FT /db_xref="InterPro:IPR010914" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHL3" FT /protein_id="CAH06367.1" FT /translation="MKGLVIKNTGSWYQVKTDDGQLVECKIKGNFRLKGIRSTNPVAVG FT DRVQIILNQEGTAFISEIEDRKNYIIRRSSNLSKQSHILAANLDQCMLVVTVNYPETST FT TFIDRFLASAEAYRVPVKILFNKVDAYDEDELHYLDSLITLYTQIGYPCFKISALTGEG FT VDAIREELKGRVTLFSGHSGVGKSTLINALVPGLEVKTAEISAYHNKGMHTTTFSEMFP FT VPGDGYIIDTPGIKGFGTFDMEEEEIGHYFPEIFKTSANCKYGNCTHRQEPGCAVRKAV FT EEHYISESRYTSYLSMLEDKEEGKYRAAY" FT misc_feature complement(753516..753977) FT /note="Pfam match to entry PF03193 DUF258, Protein of FT unknown function, DUF258, score 221.4, E-value 1.2e-63" FT misc_feature complement(753852..753875) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(754508..755068) FT /transl_table=11 FT /gene="frr" FT /locus_tag="BF9343_0589" FT /old_locus_tag="BF0619" FT /product="putative ribosome recycling factor" FT /note="Similar to Thermus thermophilus ribosome recycling FT factor Frr SWALL:RRF_THETH (SWALL:Q9WX76) (185 aa) fasta FT scores: E(): 6.1e-24, 43.4% id in 182 aa, and to FT Bacteroides thetaiotaomicron ribosome recycling factor FT BT2249 SWALL:AAO77356 (EMBL:AE016935) (186 aa) fasta FT scores: E(): 6.9e-57, 91.39% id in 186 aa, and to Ralstonia FT solanacearum ribosome recycling factor frr or rrf or FT RSC1407 or RS05285 SWALL:RRF_RALSO (SWALL:Q8XZI8) (186 aa) FT fasta scores: E(): 2e-28, 47.84% id in 186 aa" FT /db_xref="GOA:Q5LHL2" FT /db_xref="InterPro:IPR002661" FT /db_xref="InterPro:IPR023584" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHL2" FT /protein_id="CAH06368.1" FT /translation="MVDVKTIIEESQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVD FT SYGSMVPISNVAAVTTPDARSITIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGI FT PPLTEERRKQLAKQCKAEGETAKVSIRNARRDGIDALKKAVKDGLAEDEQKNAEAKLQK FT VHDKYIAKIEEMLAEKDKEIMTV" FT misc_feature complement(754517..755008) FT /note="Pfam match to entry PF01765 RRF, Ribosome recycling FT factor, score 255.7, E-value 5.3e-74" FT CDS complement(755195..756253) FT /transl_table=11 FT /locus_tag="BF9343_0590" FT /old_locus_tag="BF0620" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="InterPro:IPR003646" FT /db_xref="InterPro:IPR013247" FT /db_xref="UniProtKB/TrEMBL:Q5LHL1" FT /protein_id="CAH06369.1" FT /translation="MKTFKRFLFICIGLFIIVLSTQALEKYEVTANTFLNIRSHGSTNA FT PVIGTINHGGIVNVESIDGEWAKVSFNGGYGYVSTTYIRPVTPTPPAKAPTNTLSDWFR FT QTNYDCRPLVYIILGLSIVLFILRMRRGESTPLEDSEHTINLSLFITVCLLELFYVFSM FT GANSIWFCTPDKIGWLWTIINFFIFGAVVFNQWMCFFNTLNDVQYNSYATFNWTWGIYT FT WGICIIGAIICGFFFVGFLPVVGIGFLVGQSVQTGIIFNKVLPKGGWKHACICTLTYLI FT GSTATVLIVAHFLILLLIVLIALFLLSLLGKSSSSSGGKRCSNCSHLSGSSCNLSGRYI FT SSPSTTYCDNYQ" FT misc_feature complement(order(755321..755389,755531..755599, FT 755660..755728,755771..755830,755867..755920, FT 756182..756235)) FT /note="6 probable transmembrane helices predicted for FT BF0620 by TMHMM2.0 at aa 7-24, 112-129, 142-161, 176-198, FT 219-241 and 289-311" FT misc_feature complement(756185..756253) FT /note="Signal peptide predicted for BF0620 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.889 between residues 23 and 24" FT CDS complement(756265..756816) FT /transl_table=11 FT /locus_tag="BF9343_0591" FT /old_locus_tag="BF0621" FT /product="putative ErfK/YbiS/YcfS/YnhG family protein" FT /note="Similar to the C-terminus of Anabaena sp. FT hypothetical protein ALL3278 SWALL:Q8YS14 (EMBL:AP003592) FT (272 aa) fasta scores: E(): 8.1e-06, 29.07% id in 141 aa" FT /db_xref="GOA:Q5LHL0" FT /db_xref="InterPro:IPR005490" FT /db_xref="UniProtKB/TrEMBL:Q5LHL0" FT /protein_id="CAH06370.1" FT /translation="MKKKIIRYLIVSHLTFILSIGGMAVAFYYYHTAQMAQIKNANILL FT ISKDEMKLRLIDYKGQELFTADIACGKNYGNKEKQGDLKTPEGTFKIIDIQDASKWKHD FT FGDGKGEIEGAYGNHFIRLETPGHKGIGIHGTHDPLSIGTRATEGCIRIKNSELEQLVS FT LIRVPTTVIITPSVKDIKTQ" FT misc_feature complement(756295..756705) FT /note="Pfam match to entry PF03734 ErfK_YbiS_YhnG, FT ErfK/YbiS/YcfS/YnhG, score 46.9, E-value 3.9e-11" FT misc_feature complement(756712..756816) FT /note="Signal peptide predicted for BF0621 by SignalP 2.0 FT HMM (Signal peptide probability 0.973) with cleavage site FT probability 0.364 between residues 35 and 36" FT misc_feature complement(756724..756792) FT /note="1 probable transmembrane helix predicted for BF0621 FT by TMHMM2.0 at aa 9-31" FT CDS complement(756827..759622) FT /transl_table=11 FT /locus_tag="BF9343_0592" FT /old_locus_tag="BF0622" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="InterPro:IPR013247" FT /db_xref="UniProtKB/TrEMBL:Q5LHK9" FT /protein_id="CAH06371.1" FT /translation="MDKTLLKLEIGKWNEACRFLKSKQTELSTAEWTAIETLADYWRKK FT FDPDATSECMDLISTLEQSDKLHSNNKEIIVWSKEFRTIARKYYTKDETTFLVFQNALK FT ELYQSSAPRSSAPLQTPVNSESQNIILKQNAKKWVSTYSQLYENQNELDRDEWNAVRFL FT ANFWKNGTFNETSRKECEQYISILIASDKLHSNNKNIITWSKDFRGIAKTYYTKDSKTF FT EDFKKFMTKYTRENPIQERAPQERIPQTPPRQTSPSIEITGLVIANTDEKGDPIPSNQA FT ELDTRSCYLQPRIDYRVLRGGSSVDIWYKLYAPDRTLMTASNSKSGYTWYGNVPLTGSR FT SAYPLNGFGSMSGNVFSAGQWIIEFFENDLQIATYTFTIKQYRTSTPPTQSRVTPPPPP FT RTPSNRRTSTVSPKKGHGGLWSFLIIAAIIGFCGHQYWYKPMTIDRDAERTYVYVSSLL FT QRSDKNANVEYNRIQSLPYGSELITYQKEGDGWSYIKANEKKGYVSTNYTLSKTDFELL FT NNLWGSKEAMEGAPTAKCRLALVDFIKKNNYKTGTGQWQLFAQPIEVKPNAVLYPRLAN FT GYTKFTEFAFVLSNSSTHEGVLAIYSFADDETPVFIYQEQTTENAKIKDVRYYPWKTDK FT YKVIYATPNAMVSRSPQLPTNQQPSKAKSENGLKITKALFGNTDKSYNILTQFGTQLPT FT TTQYLSPRIFYENPAGKSSVVIKYKIITPQGNLMTGTGSPSGYTNEQKVTLNRSGYINL FT AGWGNTTGDAYTSGTYRIEFWSEGELLYSTGVQIQGNSEKAVTVSSKPVECPIKIRTML FT FANSNDKGTILEDYGKPLYGNKLQYLKPKIIYSSLNGARNITLYAKIYRPNGVLIANKN FT SPNGYTYKHGMYTPAVGADNNVSYLTSWGSPECDVYSPGTYQYEIWYEGSKIFSCQVIV FT H" FT CDS complement(759650..761239) FT /transl_table=11 FT /gene="dnaK1" FT /locus_tag="BF9343_0593" FT /old_locus_tag="BF0623" FT /product="putative chaperone protein" FT /note="Similar to Halobacterium mediterranei chaperone FT protein DnaK SWALL:DNAK_HALME (SWALL:Q9HHB9) (625 aa) fasta FT scores: E(): 2.1e-42, 37.42% id in 497 aa, and to FT Clostridium acetobutylicum DnaK protein CAC0472 FT SWALL:Q97LT2 (EMBL:AE007561) (551 aa) fasta scores: E(): FT 1.3e-57, 40.18% id in 550 aa, and to Haloarcula marismortui FT chaperone protein DnaK SWALL:DNAK_HALMA (SWALL:Q01100) (635 FT aa) fasta scores: E(): 1e-41, 37.4% id in 516 aa" FT /db_xref="GOA:Q5LHK8" FT /db_xref="InterPro:IPR001023" FT /db_xref="InterPro:IPR013126" FT /db_xref="InterPro:IPR018181" FT /db_xref="UniProtKB/TrEMBL:Q5LHK8" FT /protein_id="CAH06372.1" FT /translation="MDNTRSVYGIDLGTTYSCIAQVDKFDQAIVLRNFEGDATTPSAVY FT FEDMDHVVVGKEAKGMLATEPTKTAVFIKRHIGVDDSFDKNTNEFPYHYDPTEISAFIL FT KKLVKDANDLGDNPEPIKDVVITCPAYFGTKERMQTKQAGEIAGLNVLSIINEPTAAAI FT SYGVKTDQKKTVLVYDLGGGTFDVTLINVNGGAIKVIATGGDHHLGGVDWDTALAEYML FT AAFNEQNNTSYSFEDRLDLKYELLLLAEDKKKVLTAKQTAKATYQYEGNSARIEISREL FT FNSLTERKLDETIDATKKVIAIAKEKGYNNIDEILLVGGSSRMPQIKERVDKEFNCDAK FT LTDPDECVAKGAAIYAMNAAYSQAVRDYEEGESDDKPAPLRGDRTTVVNVTSKTYGTDV FT IIEGQSMVQNLIFANSSLPTKRIETFTTSIPNQRGVSVKVFESDFTNMETESIVEERFC FT TLIDDHTLKLSKDWPQGTQISVTYQIDQEGILHGLAYVENDKLEFDLKITGVKCEEELR FT KSKAIIDKASVE" FT misc_feature complement(759653..761221) FT /note="Pfam match to entry PF00012 HSP70, Hsp70 protein, FT score 150.3, E-value 3e-42" FT misc_feature complement(760253..760297) FT /note="PS01036 Heat shock hsp70 proteins family signature FT 3." FT misc_feature complement(760670..760711) FT /note="PS00329 Heat shock hsp70 proteins family signature FT 2." FT misc_feature complement(761189..761212) FT /note="PS00297 Heat shock hsp70 proteins family signature FT 1." FT CDS complement(761279..762127) FT /transl_table=11 FT /locus_tag="BF9343_0594" FT /old_locus_tag="BF0624" FT /product="possible Hsp-70 cofactor" FT /note="Similar to Clostridium acetobutylicum GrpE protein FT Hsp-70 cofactor CAC0471 SWALL:Q97LT3 (EMBL:AE007561) (190 FT aa) fasta scores: E(): 0.056, 25.4% id in 185 aa" FT /db_xref="GOA:Q5LHK7" FT /db_xref="InterPro:IPR000740" FT /db_xref="UniProtKB/TrEMBL:Q5LHK7" FT /protein_id="CAH06373.1" FT /translation="MEWPKSKNNKMEELLERMSQFEANLAQLISTGMPNHTPSPATDEA FT TSSPNEQEQLSPEQEEEMKLKIQELQQKEEELNLRAEKLDKLAKELEERQQNLENRNPN FT DERSIEPATHPDHSFPSQIGDQINALKKLLEDSSYKDKIIKDLHEELQSHNRDLHAEIV FT KPLLKNMIKMHERLTKTYKFYENTEAKSSPETYTRLLREVENCKLHIQDILEDEYDLEY FT FEPTIGSAYSPKEQTAIRTVITDTPEQAGTIKEFHYGGFRNTTTNKIFQPSTVTVYKKS FT E" FT CDS 763205..764365 FT /transl_table=11 FT /locus_tag="BF9343_0595" FT /old_locus_tag="BF0625" FT /product="conserved hypothetical protein" FT /note="Limited similarity to Bacteroides thetaiotaomicron FT hypothetical protein BT0664 SWALL:AAO75771 (EMBL:AE016928) FT (382 aa) fasta scores: E(): 0.0001, 19.88% id in 337 aa, FT and to Bacteroides thetaiotaomicron hypothetical protein FT BT2848 SWALL:AAO77954 (EMBL:AE016937) (402 aa) fasta FT scores: E(): 0.00019, 23.36% id in 381 aa" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LHK6" FT /protein_id="CAH06374.1" FT /translation="MKKINAALVISLFVMTGCGGNKQLTDDCITVDVSADYPKKELILQ FT DFMDVEYVPLETTDDFITQGIVKATGKKILLVANRIMDGNIFVFDRATGKGVRKINRLG FT QSGEEYSHITSIVLDEDNNEMFVVDYPARKILVYDLYGEFNRSLPFPDTCYYEFLSDYD FT RDHLIGYKSYLPLIETDESCHVLISKKDGSVTRKIQIPFKELETPVVTKDEAIVTPGFF FT LITPHDGNCLLTKTSSDTVYNYLPDGTLSPFIVRTPSIHSMDPKVFLFPTIITDRYYFM FT QTLDKKFNFEKGRGFPTNDLVYDKQEKAIFQYTVYNDDFSNKHRVALGQQPEKSVDEEI FT VTCRALNASDLVEANEKGELKGKLKEIAAGLNEESNSVIMLIKRKK" FT misc_feature 763205..763264 FT /note="Signal peptide predicted for BF0625 by SignalP 2.0 FT HMM (Signal peptide probability 0.939) with cleavage site FT probability 0.390 between residues 20 and 21" FT misc_feature 763226..763258 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(764612..765322) FT /transl_table=11 FT /locus_tag="BF9343_0596" FT /old_locus_tag="BF0626" FT /product="putative uridylate kinase" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT Escherichia coli O157:H7, and Shigella flexneri uridylate FT kinase PyrH or SmbA or B0171 or C0207 or Z0182 or ECS0173 FT or SF0161 or S0164 SWALL:PYRH_ECOLI (SWALL:P29464) (240 aa) FT fasta scores: E(): 3.9e-43, 54.97% id in 231 aa, and to FT Bacteroides thetaiotaomicron uridylate kinase BT2242 FT SWALL:AAO77349 (EMBL:AE016935) (236 aa) fasta scores: E(): FT 1.5e-82, 97.88% id in 236 aa, and to Fusobacterium FT nucleatum uridylate kinase PyrH or FN1622 SWALL:PYRH_FUSNN FT (SWALL:Q8R6G5) (239 aa) fasta scores: E(): 5.8e-46, 58.44% FT id in 231 aa" FT /db_xref="GOA:Q5LHK5" FT /db_xref="HSSP:2BNE" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR011817" FT /db_xref="InterPro:IPR015963" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHK5" FT /protein_id="CAH06375.1" FT /translation="MAKYKRVLLKLSGESLMGEKQYGIDEKRLAEYAAQIKEIHEQGVQ FT IGIVIGGGNIFRGLSGANKGFDRVKGDQMGMLATVINSLALSSALVAAGVKARVLTAVR FT MEPIGEFYSKWKAIECMENGEIVIMSAGTGNPFFTTDTGSSLRGIEIEADVMLKGTRVD FT GIYTADPEKDPTATKFHDITYDEVLKRGLKVMDLTATCMCKENNLPIVVFDMDTVGNLK FT KVITGEEIGTLVHN" FT misc_feature complement(764681..765310) FT /note="Pfam match to entry PF00696 aakinase, Amino acid FT kinase family, score 204.8, E-value 1.1e-58" FT CDS complement(765371..766684) FT /transl_table=11 FT /gene="dinF" FT /locus_tag="BF9343_0597" FT /old_locus_tag="BF0627" FT /product="putative DNA-damage-inducible protein F" FT /note="Similar to Escherichia coli DNA-damage-inducible FT protein F DinF or B4044 SWALL:DINF_ECOLI (SWALL:P28303) FT (459 aa) fasta scores: E(): 3e-48, 36.42% id in 442 aa, and FT to Bacteroides thetaiotaomicron DNA-damage-inducible FT protein F BT2241 SWALL:AAO77348 (EMBL:AE016935) (439 aa) FT fasta scores: E(): 1e-136, 78.67% id in 436 aa, and to FT Vibrio cholerae DNA-damage-inducible protein F vc0090 FT SWALL:Q9KVQ1 (EMBL:AE004100) (454 aa) fasta scores: E(): FT 4.5e-60, 39.85% id in 419 aa" FT /db_xref="GOA:Q5LHK4" FT /db_xref="InterPro:IPR002528" FT /db_xref="UniProtKB/TrEMBL:Q5LHK4" FT /protein_id="CAH06376.1" FT /translation="MNKQMHISNGNKRILQIAVPSIISNITVPLLGLVDVTIVGHLGSA FT AYIGAIAVGGMLFNIIYWIFGFLRMGTSGMTSQAFGQRNLEEVTKLLLRSVGVGLFIAL FT CLMTLQYPIQKAAFAFIQTSDEVERLATLYFRICIWGAPAMLGLYGFAGWFIGMQNSRF FT PMYIAITQNIVNILASLCFVFLFGMKVEGVALGTLIAQYAGFLMALLLWLRYYKQLRKR FT VHWRGIWQKQAMYRFFQVNRDIFLRTLCLVAVTMFFTSAGAAQGEVVLAVNTLLMQLFT FT LFSYIMDGFAYAGEALAGRYIGAGNRMELHRTVRQLFGWGVGLSAGFTLLYGIGGQSFL FT GLLTNESSVIQEADTYFYWVLAIPLAGFSAFLWDGIFIGATATRQMLFSMFIASASFFL FT TYYIFQEVMGNHALWMAFIIYLSLRGLVQAFLAKKIVH" FT misc_feature complement(order(765389..765448,765476..765529, FT 765554..765622,765665..765733,765791..765859, FT 765887..765955,766037..766105,766115..766183, FT 766220..766288,766346..766414,766475..766543, FT 766556..766624)) FT /note="12 probable transmembrane helices predicted for FT BF0627 by TMHMM2.0 at aa 21-43, 48-70, 91-113, 133-155, FT 168-190, 194-216, 244-266, 276-298, 318-340, 355-377, FT 386-403 and 413-432" FT misc_feature complement(766142..766630) FT /note="Pfam match to entry PF01554 MatE, MatE, score 105.7, FT E-value 7.9e-29" FT CDS 767283..768206 FT /transl_table=11 FT /locus_tag="BF9343_0598" FT /old_locus_tag="BF0629" FT /product="putative endo-beta-galactosidase" FT /note="Similar to Flavobacterium keratolyticus FT endo-beta-galactosidase SWALL:Q9ZG90 (EMBL:AF083896) (422 FT aa) fasta scores: E(): 8.6e-06, 24.26% id in 272 aa, and to FT Caulobacter crescentus beta-glucanase cc0380 SWALL:Q9AB54 FT (EMBL:AE005711) (301 aa) fasta scores: E(): 5e-07, 25.92% FT id in 297 aa" FT /db_xref="GOA:Q5LHK3" FT /db_xref="InterPro:IPR000757" FT /db_xref="InterPro:IPR008985" FT /db_xref="InterPro:IPR013320" FT /db_xref="UniProtKB/TrEMBL:Q5LHK3" FT /protein_id="CAH06377.1" FT /translation="MNTTGRLSFHPSEIPTVFKSPITGRTYHLVFNDEFDDGVIDTLKW FT DTRSRRSPFTRRGMYQEKPYYVLCHEDWTKELHGELRLEVSKYPTQNNVVMTGGILSLG FT RFMARYGYYETKASFRDCIGEGYWPAFWIHFDEADKYGKGTEIDVFEYIPKDKQIFQTL FT HWYKKQAMEEQQSEVQHAALDYDKSGQFKEHRSSTKYFVLDEAQSKEHTFAVEWTPEEL FT IFYTDGKVTRRVNRKDDPKQVPSAYQMVYFSCSAGEWGGNVMENQVPAYVYFDYCRCYQ FT ESDQDAIYTVKGNGMKVPASRRVGKL" FT misc_feature 767463..768116 FT /note="Pfam match to entry PF00722 Glyco_hydro_16, Glycosyl FT hydrolases family 16, score -25.6, E-value 1.1e-06" FT CDS 768312..769004 FT /transl_table=11 FT /locus_tag="BF9343_0599" FT /old_locus_tag="BF0630" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron TPR-domain FT containing protein BT2240 SWALL:AAO77347 (EMBL:AE016935) FT (227 aa) fasta scores: E(): 2.1e-52, 62.99% id in 227 aa" FT /db_xref="GOA:Q5LHK2" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:Q5LHK2" FT /protein_id="CAH06378.1" FT /translation="MKKMKTLTLFLSLLFSFPFVLSAQMVGETLQKVSAALDNRQWDQA FT VTLFRQAVNTNVEKAEMFYWTGVDKSLEVSSRIGRELAAYYKKSRSYDKAYLFYKELLQ FT KSPNDVNCLVSCAEMEVCRGRESEALETYRKVLSLDADNLAANIFIGNYLYLKAEREKK FT QLEADYKKISAPTRMQYARYRDGLSRVMSTGYGKAREYLQKVISQFPSTEAQKTLERIK FT LIEKEVNR" FT misc_feature 768312..768380 FT /note="Signal peptide predicted for BF0630 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.547 between residues 23 and 24" FT misc_feature 768330..768389 FT /note="1 probable transmembrane helix predicted for BF0630 FT by TMHMM2.0 at aa 7-26" FT CDS complement(769031..770341) FT /transl_table=11 FT /locus_tag="BF9343_0600" FT /old_locus_tag="BF0631" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT0171 SWALL:AAO75278 (EMBL:AE016926) FT (427 aa) fasta scores: E(): 1.1e-45, 42.92% id in 438 aa" FT /db_xref="InterPro:IPR008754" FT /db_xref="InterPro:IPR023852" FT /db_xref="InterPro:IPR024079" FT /db_xref="InterPro:IPR024361" FT /db_xref="UniProtKB/TrEMBL:Q5LHK1" FT /protein_id="CAH06379.1" FT /translation="MKTEYLFVILLVLIGFSSCEDSTSDATLELSQSTFENISSDGATL FT TVNITSSDSWTAASSSTACNLVPNQGTSNQSLSIVVEANLDEAERNMTVVVTSGGIKKT FT ISISQQGRSTTAGEYHYNLPVIFHVLYKDKNNPLQYVKQDRLAKILDTVNKLYKDKTKS FT VDMNLTFTLATTDEDGKPLSTPGVKYVLWEESYPIDCDVFMNDETGKYVKYIWEPNNYI FT NVMVYNFKDDESTNSTTLGIAHIPFSTVGSNYLEGLSKTQKSYLEKQNLKFPYSVSINS FT LFINDQSTSTQYSTADITVTLAHELGHYLGLHHAFSENDEGIYDGCFDSDYCDDTPTYN FT KVEYDADYAYTAKNDPANFTFDYLVKRKNCKTNQTFTSTNIMDYSVSYSDRFTNDQRSR FT IRHVLTYSPLIPGPKQGQTQTRSVVEGPIDLPIRTAR" FT misc_feature complement(769412..769441) FT /note="PS00142 Neutral zinc metallopeptidases, zinc-binding FT region signature." FT misc_feature complement(770282..770341) FT /note="Signal peptide predicted for BF0631 by SignalP 2.0 FT HMM (Signal peptide probability 0.669) with cleavage site FT probability 0.248 between residues 20 and 21" FT misc_feature complement(770285..770317) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(770407..771162) FT /transl_table=11 FT /locus_tag="BF9343_0601" FT /old_locus_tag="BF0632" FT /product="putative biotin/lipoate A/B protein ligase family FT protein" FT /note="Similar to Bacillus subtilis BirA bifunctional FT protein [includes: biotin operon repressor; FT biotin--[acetyl-coA-carboxylase] synthetase BirA FT SWALL:BIRA_BACSU (SWALL:P42975) (325 aa) fasta scores: E(): FT 2e-10, 29.3% id in 215 aa, and to Bacteroides FT thetaiotaomicron putative biotin-- BT2238 SWALL:AAO77345 FT (EMBL:AE016935) (248 aa) fasta scores: E(): 3.2e-63, 65.04% FT id in 246 aa, and to Aquifex aeolicus biotin BirA or AQ_566 FT SWALL:O66837 (EMBL:AE000696) (233 aa) fasta scores: E(): FT 1.3e-15, 34.93% id in 229 aa" FT /db_xref="GOA:Q5LHK0" FT /db_xref="InterPro:IPR004143" FT /db_xref="InterPro:IPR004408" FT /db_xref="UniProtKB/TrEMBL:Q5LHK0" FT /protein_id="CAH06380.1" FT /translation="MMPCPESFPVPLIHIAKADSTNGYLNALCEKEKVSELTTVVADFQ FT TAGRGQRGNSWESEDGKNLMFSFVLYPTFLEARKQFLLSQIASLAVKETLDLYIGDVSI FT KWPNDIYWKDKKICGMLIENDLMGIHISQSIAGVGININQKEFHSSAPNPISIIQITHR FT ESDRMEILAQVLQRIKEYYKILQEGDIEFITDRYQAALFRKEGIHFYKDSEGTFNAGIV FT EVEADGHLVLQDETGKIRRYLFKEVQYIL" FT misc_feature complement(770719..771132) FT /note="Pfam match to entry PF03099 BPL_LipA_LipB, FT Biotin/lipoate A/B protein ligase family, score 119.1, FT E-value 6.9e-33" FT CDS complement(771146..771502) FT /transl_table=11 FT /locus_tag="BF9343_0602" FT /old_locus_tag="BF0633" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2237 SWALL:AAO77344 (EMBL:AE016935) FT (118 aa) fasta scores: E(): 6.7e-37, 80.5% id in 118 aa, FT and to Streptomyces coelicolor hypothetical protein sco2535 FT or scc77.02 SWALL:Q9RDF6 (EMBL:AL939113) (124 aa) fasta FT scores: E(): 6.5e-11, 38.79% id in 116 aa, and to FT Streptomyces lavendulae MmcQ SWALL:Q9X5T5 (EMBL:AF127374) FT (123 aa) fasta scores: E(): 3.2e-08, 30.7% id in 114 aa" FT /db_xref="InterPro:IPR007351" FT /db_xref="UniProtKB/TrEMBL:Q5LHJ9" FT /protein_id="CAH06381.1" FT /translation="MNIESAREYCLRKKAVTECFPFDEYSLVMKVMDKMFALIDLERAN FT TISLKCDPDYAIELREHYSAIEGAYHFHKKYWNQVYFDRDADDKLIKQLIDHSYDEVMK FT KFTKKLRTEYDALP" FT misc_feature complement(771194..771493) FT /note="Pfam match to entry PF04237 DUF419, Protein of FT unknown function (DUF419), score 96.8, E-value 3.7e-26" FT CDS complement(771509..771874) FT /transl_table=11 FT /locus_tag="BF9343_0603" FT /old_locus_tag="BF0634" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2236 SWALL:AAO77343 (EMBL:AE016935) FT (121 aa) fasta scores: E(): 4.2e-36, 79.33% id in 121 aa, FT and to Bifidobacterium longum hypothetical protein Bl0935 FT bl0935 SWALL:Y935_BIFLO (SWALL:Q8G5R9) (124 aa) fasta FT scores: E(): 5.7e-08, 35.2% id in 125 aa, and to FT Clostridium perfringens hypothetical protein CPE1705 FT SWALL:YH05_CLOPE (SWALL:Q8XJQ1) (122 aa) fasta scores: E(): FT 2.3e-07, 31.66% id in 120 aa" FT /db_xref="GOA:Q5LHJ8" FT /db_xref="InterPro:IPR003509" FT /db_xref="InterPro:IPR011335" FT /db_xref="InterPro:IPR011856" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHJ8" FT /protein_id="CAH06382.1" FT /translation="MAEHNLLGKAGEDAAVDYLERHDYVIRHRNWRKGHFELDIVAAKN FT GELIIVEVKTRSDTDFALPQDAVTPQKIRRTVIAADTYIKLFQIDEPVRFDIITVIGKT FT GNFRIEHIKEAFYPPLF" FT misc_feature complement(771572..771847) FT /note="Pfam match to entry PF02021 UPF0102, Uncharacterised FT protein family UPF0102, score 48.0, E-value 1.8e-11" FT CDS 772012..772245 FT /transl_table=11 FT /locus_tag="BF9343_0604" FT /old_locus_tag="BF0636" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2235 SWALL:AAO77342 (EMBL:AE016935) (77 aa) fasta FT scores: E(): 5.5e-24, 87.01% id in 77 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHJ7" FT /protein_id="CAH06383.1" FT /translation="MRKRDKKCNKATPDEPKRERRMSILLSEDEQQIVDRYLDKYKITN FT KSRWLRETILMFIHKNMEEDYPTLFGEHDMRR" FT CDS 772250..772687 FT /transl_table=11 FT /locus_tag="BF9343_0605" FT /old_locus_tag="BF0637" FT /product="possible cytosine deaminase" FT /note="Similar to Staphylococcus epidermidis Cu binding FT protein se0327 SWALL:Q8CMN3 (EMBL:AE016745) (168 aa) fasta FT scores: E(): 2.1e-21, 49.33% id in 150 aa, and to FT Bacteroides thetaiotaomicron putative cytosine/adenosine FT deaminase BT2234 SWALL:AAO77341 (EMBL:AE016935) (147 aa) FT fasta scores: E(): 5e-54, 95.83% id in 144 aa, and to FT Porphyromonas gingivalis Orf150 protein SWALL:Q51833 FT (EMBL:X95938) (150 aa) fasta scores: E(): 9.6e-32, 58.45% FT id in 142 aa" FT /db_xref="GOA:Q5LHJ6" FT /db_xref="InterPro:IPR002125" FT /db_xref="InterPro:IPR016192" FT /db_xref="InterPro:IPR016193" FT /db_xref="UniProtKB/TrEMBL:Q5LHJ6" FT /protein_id="CAH06384.1" FT /translation="MLDDSYFMKQALIEAVKAGERGEVPVGAVVVCKERIIARAHNLTE FT TLNDVTAHAEMQAITAAANVLGGKYLNECTLYVTVEPCVMCAGAIAWAQTGKLVFGAED FT DKRGYQRYAPQALHPKTVVVKGILADECAGLMKDFFAAKRR" FT misc_feature 772250..772555 FT /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine FT and deoxycytidylate deaminase zinc-binding region, score FT 127.3, E-value 2.4e-35" FT misc_feature 772406..772519 FT /note="PS00903 Cytidine and deoxycytidylate deaminases FT zinc-binding region signature." FT CDS complement(772704..772991) FT /transl_table=11 FT /locus_tag="BF9343_0606" FT /old_locus_tag="BF0638" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2233 SWALL:AAO77340 (EMBL:AE016935) (99 aa) fasta FT scores: E(): 2.1e-10, 43.87% id in 98 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHJ5" FT /protein_id="CAH06385.1" FT /translation="MFHILGFLFIIVIAVIIIGLALVGSVLRAVFGLGKRSPSSGSDRN FT GPNNNSGSRRYYHQTQANDKEEIITGTGAKHKKLFDDNEGEYVDYEEIKE" FT misc_feature complement(772908..772991) FT /note="Signal peptide predicted for BF0638 by SignalP 2.0 FT HMM (Signal peptide probability 0.972) with cleavage site FT probability 0.668 between residues 28 and 29" FT misc_feature complement(772914..772982) FT /note="1 probable transmembrane helix predicted for BF0638 FT by TMHMM2.0 at aa 4-26" FT CDS complement(773054..773764) FT /transl_table=11 FT /locus_tag="BF9343_0607" FT /old_locus_tag="BF0639" FT /product="putative phosphatidylserine synthase" FT /note="Similar to Rhizobium loti phosphatidylserine FT synthase MLR7822 SWALL:Q984V9 (EMBL:AP003012) (248 aa) FT fasta scores: E(): 1.5e-12, 34.17% id in 237 aa, and to FT Bacteroides thetaiotaomicron CDP-diacylglycerol--serine FT O-phosphatidyltransferase BT2232 SWALL:AAO77339 FT (EMBL:AE016935) (235 aa) fasta scores: E(): 2.6e-68, 72.57% FT id in 237 aa, and to Fusobacterium nucleatum FT CDP-diacylglycerol--serine O-phosphatidyltransferase FN0991 FT SWALL:Q8REU8 (EMBL:AE010606) (261 aa) fasta scores: E(): FT 4.2e-14, 31.33% id in 233 aa" FT /db_xref="GOA:Q5LHJ4" FT /db_xref="InterPro:IPR000462" FT /db_xref="InterPro:IPR004533" FT /db_xref="UniProtKB/TrEMBL:Q5LHJ4" FT /protein_id="CAH06386.1" FT /translation="MANAITRHIPNTVTCLNLFSGCIAGVMAFEAKYELAFIFIILSAV FT FDFFDGMLARLLHAYSPIGKELDSLADDVSFGVAPSLLVFSFLKEPGLIYPDFLAGLRD FT YIPYLAFLISIFSALRLANFNVDERQTSSFIGLPVPANALYWGALIVGGKDFLLAHCNV FT IYLIIMVMLFSWLLVAEIPMFSLKFKNLSWKDNKVSFIFLIVCIPLLLFLGISGFSAVI FT VWYIILSLLTRKNK" FT misc_feature complement(order(773084..773173,773210..773278, FT 773306..773374,773393..773452,773594..773662)) FT /note="5 probable transmembrane helices predicted for FT BF0639 by TMHMM2.0 at aa 35-57, 105-124, 131-153, 163-185 FT and 198-227" FT misc_feature complement(773222..773656) FT /note="Pfam match to entry PF01066 CDP-OH_P_transf, FT CDP-alcohol phosphatidyltransferase, score 47.2, E-value FT 3.2e-11" FT misc_feature complement(773549..773617) FT /note="PS00379 CDP-alcohol phosphatidyltransferases FT signature." FT misc_feature complement(773681..773764) FT /note="Signal peptide predicted for BF0639 by SignalP 2.0 FT HMM (Signal peptide probability 0.636) with cleavage site FT probability 0.492 between residues 28 and 29" FT misc_feature complement(773699..773731) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(773774..774460) FT /transl_table=11 FT /locus_tag="BF9343_0608" FT /old_locus_tag="BF0640" FT /product="putative phosphatidylserine decarboxylase FT proenzyme" FT /note="Similar to Rhizobium meliloti phosphatidylserine FT decarboxylase proenzyme Psd or r01121 or SMC00551 FT SWALL:Q9FDI9 (EMBL:AF247564) (232 aa) fasta scores: E(): FT 1.2e-19, 35.74% id in 221 aa, and to Bacteroides FT thetaiotaomicron phosphatidylserine decarboxylase proenzyme FT Psd or BT2231 SWALL:AAO77338 (EMBL:AE016935) (228 aa) fasta FT scores: E(): 4.3e-82, 88.15% id in 228 aa, and to Brucella FT suis phosphatidylserine decarboxylase proenzyme Psd or FT Br0443 SWALL:Q8G285 (EMBL:AE014354) (232 aa) fasta scores: FT E(): 1.1e-23, 39.72% id in 219 aa" FT /db_xref="GOA:Q5LHJ3" FT /db_xref="InterPro:IPR003817" FT /db_xref="InterPro:IPR004428" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHJ3" FT /protein_id="CAH06387.1" FT /translation="MGRLKKLKKIRIHREGTHILWGSFFLLLIINLALYWGIDCKIPFY FT LVALVSIVVYLLMVNFFRCPIRLFGQDTEKIVVAPADGKIVVIEEVDEHEYFHDRRIMV FT SIFMSILNVHANWYPVDGVVKKVTHDNGKFMKAWLPKASTENERSMIVIETPEGVEVMA FT RQIAGAMARRIVTYAEPGEECYIDEHLGFIKFGSRVDVYLPLGTEICVSMGQLTTGNQT FT VIAKLK" FT misc_feature complement(773786..774301) FT /note="Pfam match to entry PF02666 PS_Dcarbxylase, FT Phosphatidylserine decarboxylase, score 97.8, E-value FT 1.8e-26" FT misc_feature complement(order(774269..774337,774347..774406)) FT /note="2 probable transmembrane helices predicted for FT BF0640 by TMHMM2.0 at aa 19-38 and 42-64" FT CDS 774624..778418 FT /transl_table=11 FT /gene="dnaE" FT /locus_tag="BF9343_0609" FT /old_locus_tag="BF0641" FT /product="putative DNA polymerase III alpha subunit" FT /EC_number="2.7.7.7" FT /note="Similar to Thermus aquaticus DNA polymerase III FT alpha subunit DnaE SWALL:DP3A_THEAQ (SWALL:Q9XDH5) (1220 FT aa) fasta scores: E(): 8.1e-114, 36.68% id in 1292 aa, and FT to Bacteroides thetaiotaomicron DNA polymerase III alpha FT subunit BT2230 SWALL:AAO77337 (EMBL:AE016935) (1267 aa) FT fasta scores: E(): 0, 89.82% id in 1268 aa, and to FT Streptomyces coelicolor DNA polymerase III alpha subunit FT DnaE or sco2064 or sc4g6.33C SWALL:DP3A_STRCO FT (SWALL:Q9Z618) (1179 aa) fasta scores: E(): 2.1e-101, FT 34.55% id in 1253 aa" FT /db_xref="GOA:Q5LHJ2" FT /db_xref="InterPro:IPR003141" FT /db_xref="InterPro:IPR004013" FT /db_xref="InterPro:IPR004805" FT /db_xref="InterPro:IPR011708" FT /db_xref="InterPro:IPR016195" FT /db_xref="UniProtKB/TrEMBL:Q5LHJ2" FT /protein_id="CAH06388.1" FT /translation="MQDFVHLHVHTQYSLLDGQASVSALVDKAMKDGMKGIAVTDHGNM FT FAIKEFTNYVNKKNGGPKGEIKDLKKRIAAIEAGEVECADKDAEIADCKAKIADAEGRL FT FKPIIGCEMYVARRTMDKKEGKPDQSGYHLIVLAKNEKGYHNLIKLVSRAWTKGYYMRP FT RTDRNELEKYHEGLIICSACLGGEVPKKITQGLLAEAEEAIQWYKNLFGDDYYLEMQRH FT KATVPKANHEAYPLQVNVNKHLIEYSKKYNVKLICTNDVHFVNEEHAEAHDRLICLSTG FT KDLDDPNRMYYTKQEWMKTKAEMNELFADVPEALSNTLEILDKVEYYSIDHAPIMPTFA FT IPEDFGTEEGYRQKYTEKDLFDEFTQDENGNVVLSEEAAKDKIKRLGGYDKLYRIKLEA FT DYLKKLTFDGAKKFYGDPLSPEVKERLVFELHIMKTMGFPGYFLIVQDFIAAGRNMGVS FT IGPGRGSAAGSAVAYCLQITKIDPIKYDLLFERFLNPDRISLPDIDIDFDDDGRGEVLR FT WVTEKYGQEKVAHIITYGTMATKLAIKDVARVQKLPLAESDRLAKLVPDKIPDKKLNLK FT NAIEYVPELQAAEASPDPLVRDTMKYAKMLEGNVRGTGVHACGTIICRDDITDWVPVST FT ADDKETGEKMLVTQYEGSVIEDTGLIKMDFLGLKTLSIIKEAVENIRLSKGMELDIDSI FT SIEDPATYKLYSDGRTIGTFQFESAGMQKYLRELQPSTFEDLIAMNALYRPGPMDYIPD FT FIDRKHGRKPIEYDIPVMEKYLKDTYGITVYQEQVMLLSRLLADFTRGESDALRKAMGK FT KLRDKLDHMKPKFVEGGRKNGHDPKVLEKIWADWEKFASYAFNKSHATCYSWVAYQTAY FT LKANYPAEYMAAVMSRSLSNITDITKLMDECKMMGVQTLGPDVNESNLKFTVNRNGNIR FT FGLGAVKGVGEAAVQSIMEERKENGPFKGIFDFVQRVNLNACNKKNMECLALAGGFDSF FT PELKREQYFAVNSKGETFLETLMRYGNRYQADKAAAVNSLFGGDNVIDIATPEILPAER FT WNDLERLNKERELVGIYLSAHPLDEYAIVLEHVCNTHMSELDDKSALAGREITMGGIVT FT SVRRGISKNGNPYGIAKIEDYSGSAEIPFFGNDWVTFQGYLGEGTFLFIKARCQPKQWR FT PDELDVKITSMELLPDVKEQLIEKITILIPLAELNSALVTELASLTKEHPGNTELYFKV FT TDTEGKMYVDLISRPVKLSVGRELISYLKERPELAFHIN" FT misc_feature 774636..774830 FT /note="Pfam match to entry PF02231 PHP_N, PHP domain FT N-terminal region, score 74.5, E-value 1.9e-19" FT misc_feature 775011..775433 FT /note="Pfam match to entry PF02811 PHP_C, PHP domain FT C-terminal region, score 113.8, E-value 2.9e-31" FT CDS 778479..778793 FT /transl_table=11 FT /gene="trxA" FT /locus_tag="BF9343_0610" FT /old_locus_tag="BF0642" FT /product="putative thioredoxin" FT /note="Similar to Anabaena sp. thioredoxin 1 TrxA or FT ALR0052 SWALL:THI1_ANASP (SWALL:P06544) (106 aa) fasta FT scores: E(): 1.6e-19, 50% id in 104 aa, and to Bacteroides FT thetaiotaomicron thioredoxin BT2229 SWALL:AAO77336 FT (EMBL:AE016935) (104 aa) fasta scores: E(): 4.1e-34, 81.73% FT id in 104 aa, and to C-terminus of Pisum sativum FT thioredoxin M-type, chloroplast precursor SWALL:THIM_PEA FT (SWALL:P48384) (172 aa) fasta scores: E(): 1.3e-19, 53.46% FT id in 101 aa" FT /db_xref="GOA:Q5LHJ1" FT /db_xref="InterPro:IPR005746" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR013766" FT /db_xref="InterPro:IPR017937" FT /db_xref="UniProtKB/TrEMBL:Q5LHJ1" FT /protein_id="CAH06389.1" FT /translation="MALEITDNNFKEILAEGSPVVIDFWAPWCGPCKMVGPIIDELAKE FT YEGKVIMGKCDVDENSDLPAEFGIRNIPTVLFFKNGELVDKQVGAVGKPAFVEKVEKLL FT " FT misc_feature 778482..778790 FT /note="Pfam match to entry PF00085 thiored, Thioredoxin, FT score 137.7, E-value 1.8e-38" FT misc_feature 778539..778595 FT /note="PS00194 Thioredoxin family active site." FT CDS 778820..779155 FT /transl_table=11 FT /locus_tag="BF9343_0611" FT /old_locus_tag="BF0643" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2228 SWALL:AAO77335 (EMBL:AE016935) (111 aa) FT fasta scores: E(): 5.1e-34, 87.38% id in 111 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHJ0" FT /protein_id="CAH06390.1" FT /translation="MGLEDDFLLNDADDEKTIEFIRNYLPQELKEKFSEDELYYFLDLI FT DEYYSESGILDVQPDADGYVDIDLEQVVEFIVKEAKKDEVGEYDPEDILFVVQGEMEYG FT NSLGQVE" FT CDS complement(779378..780109) FT /transl_table=11 FT /locus_tag="BF9343_0612" FT /old_locus_tag="BF0644" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2224 SWALL:AAO77331 (EMBL:AE016935) FT (241 aa) fasta scores: E(): 7.2e-61, 68.72% id in 243 aa, FT and to Pseudomonas aeruginosa hypothetical protein Pa4318 FT pa4318 SWALL:Q9HW83 (EMBL:AE004848) (265 aa) fasta scores: FT E(): 1.4e-08, 36.99% id in 173 aa" FT /db_xref="GOA:Q5LHI9" FT /db_xref="InterPro:IPR010432" FT /db_xref="UniProtKB/TrEMBL:Q5LHI9" FT /protein_id="CAH06391.1" FT /translation="MAESTIITGQFVRISQVPASLGERILARIIDYFLLFIYILATSYI FT LGKLNIHAFSGSTFFLLFLFIYLPVLCYSLLCEVFNQGQSAGKKLMNIRVVKADGTTPS FT LSAYLLRWLLYGIDVTITGGLGVLVILLTKNSQRLGDLAAGTMVIKEKNYRKIQVSLDE FT FDYLTKGYHPSFPSAADLSLEQINVISKALELHHKDRTRHIAQLAPKVRALLSVDQTNI FT NDEKFLQTVVRDYQYYALEEI" FT misc_feature complement(order(779714..779782,779867..779935, FT 779969..780037)) FT /note="3 probable transmembrane helices predicted for FT BF0644 by TMHMM2.0 at aa 25-47, 59-81 and 110-132" FT CDS 781031..781993 FT /transl_table=11 FT /locus_tag="BF9343_0613" FT /old_locus_tag="BF0647" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein, putative integral membrane protein FT BT2216 SWALL:AAO77323 (EMBL:AE016935) (320 aa) fasta FT scores: E(): 3.2e-100, 80.62% id in 320 aa, and to Bacillus FT halodurans hypothetical protein BH0733 SWALL:Q9KEW6 FT (EMBL:AP001509) (355 aa) fasta scores: E(): 1.6e-19, 28.12% FT id in 320 aa, and to Synechocystis sp. hypothetical protein FT Slr1478 SWALL:P74166 (EMBL:D90912) (317 aa) fasta scores: FT E(): 9.3e-19, 29.16% id in 312 aa" FT /db_xref="GOA:Q5LHI8" FT /db_xref="InterPro:IPR002798" FT /db_xref="UniProtKB/TrEMBL:Q5LHI8" FT /protein_id="CAH06392.1" FT /translation="MKEVTFIRRNIEKWKETEKVVEQADKLTPDRLADAYTELTADLAF FT AQTHYPSSRITIYLNNLASALHNVIYRNKKEKWTRIFTFWTQEVPQTMYHARKELLVSV FT LIFLASVLVGIVSAANDDNFVRLILGNGYVDMTLDNIARGEPMAVYNGSEEVPMFLGIT FT LNNIMVSFNVFAMGLLTSFGTGWLLFNNGVMLGAFQTFFFKHGLLGESMLAIWLHGTLE FT IWAIIVAGAAGLALGNGWLFPGTYSRKESFMRGAKKGLKIIVGTVPIFIMAGFIEGFIT FT RHTELPDVLRLGIILLSLSFIIYYYIYLPNRKTHGITKT" FT misc_feature order(781328..781387,781499..781567,781586..781639, FT 781697..781756,781814..781870,781898..781957) FT /note="6 probable transmembrane helices predicted for FT BF0647 by TMHMM2.0 at aa 100-119, 157-179, 186-203, FT 223-242, 262-280 and 290-309" FT misc_feature 781682..781873 FT /note="Pfam match to entry PF01944 DUF95, Integral membrane FT protein DUF95, score 18.6, E-value 8.5e-06" FT CDS 781974..782906 FT /transl_table=11 FT /locus_tag="BF9343_0614" FT /old_locus_tag="BF0648" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2215 SWALL:AAO77322 (EMBL:AE016935) (310 aa) FT fasta scores: E(): 2.2e-75, 64.83% id in 310 aa" FT /db_xref="GOA:Q5LHI7" FT /db_xref="UniProtKB/TrEMBL:Q5LHI7" FT /protein_id="CAH06393.1" FT /translation="MESQKPKIALYVKRPFGDKLNATMDFIKENWKPMLKFCTYLILPL FT CLIQAISMNGIMGGAMGIAAAKEAGTNSLAAIGMQFWVNYGLMFLCYLVGSILLTSIIY FT GLMQVYNQREERLAGVTFADLKPFLFKNIRRLLVMVLFCIGLTIVVGIVMGILVVASPF FT TLLLTIPLLIACAVPLALFTPIYLFEEIGILAAFWKTFRLGFATWGGVFLVSLVMGLIS FT SVLQGVTTTPWYIATIVKYFFMLSDTQNELTISAGYSFMVYLLAIVQTFGAYLSMIFSL FT IGMVYQYGHASEVVDSISVESEIDKFEQL" FT misc_feature order(782097..782165,782223..782291,782379..782447, FT 782460..782519,782580..782648,782751..782819) FT /note="6 probable transmembrane helices predicted for FT BF0648 by TMHMM2.0 at aa 42-64, 84-106, 136-158, 163-182, FT 203-225 and 260-282" FT CDS 782917..783540 FT /transl_table=11 FT /locus_tag="BF9343_0615" FT /old_locus_tag="BF0649" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2214 SWALL:AAO77321 (EMBL:AE016935) (204 aa) FT fasta scores: E(): 2.7e-49, 65.04% id in 206 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHI6" FT /protein_id="CAH06394.1" FT /translation="MTLQADTLVCDTARVAFWQSNPDYDYNRELMTPEIDIYGWLSMQL FT SKLLRAIFGSRFAEEYSGIILIIIAILILLLILWFLYKKRPELFMRSRRGPVNYSVHED FT TIYGVDFDAEIRRAIDRKDYREAIRLLYLQTLKLLSDDGRIDWQLYKTPTEYIYEVKQE FT MLRTPFRNLTHGFLRVRYGNFPASESLFEELAALQTQIRKGGDV" FT misc_feature 783094..783162 FT /note="1 probable transmembrane helix predicted for BF0649 FT by TMHMM2.0 at aa 60-82" FT CDS 783537..784784 FT /transl_table=11 FT /locus_tag="BF9343_0616" FT /old_locus_tag="BF0650" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2213 SWALL:AAO77320 (EMBL:AE016935) (424 aa) FT fasta scores: E(): 3.8e-47, 55.95% id in 420 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHI5" FT /protein_id="CAH06395.1" FT /translation="MRSSRWFIIGIVLFLLIMFVVESHLPKKFVWNPTFAQHDHQPLGC FT AVFDDVLKSSLPDGYFLSRKTFYQFAADSDSCRSILVITQHVNLVEADLNALLDLAQRG FT NKILIAASSFSTSLSDTLGFDNSYAYFNPRRMKEYAGNLLERDSVCWIGDSAVYDKRTF FT RFYPHLCGIYFTKYDSLSLPLATSRIDSMQMFNDSLPDCFPPVALSRPVGSGEIVLVTT FT PLLFTNYGMLDGDNAAYLFRLLSHLKGLPVVRTEAYGAGAQVEVSPFRYFLSQRPLRWA FT LYLTMLVLVLFMVFTARRRQRAIPVIREPANRNLEFAELIGTLYYQKKNHADLVRKKFI FT YFAESLRRNIQVDVEDDSDDNALSRRISRKTGTDEEKVRNLFRKLRPVIRGQQEVGETL FT MKDLIDGMNEIEKPQP" FT misc_feature 783537..783605 FT /note="Signal peptide predicted for BF0650 by SignalP 2.0 FT HMM (Signal peptide probability 0.903) with cleavage site FT probability 0.877 between residues 23 and 24" FT misc_feature order(783555..783614,784374..784427) FT /note="2 probable transmembrane helices predicted for FT BF0650 by TMHMM2.0 at aa 7-26 and 280-297" FT CDS 784869..785843 FT /transl_table=11 FT /locus_tag="BF9343_0617" FT /old_locus_tag="BF0651" FT /product="putative methanol denhydrogenase-related protein" FT /note="Similar to Bacteroides thetaiotaomicron magnesium FT chelatase, subunit I, putative ATPase BT2212 SWALL:Q8A5M6 FT (EMBL:AE016935) (324 aa) fasta scores: E(): 1.7e-97, 87.96% FT id in 324 aa, and to Thermoanaerobacter tengcongensis FT MoxR-like ATPases TTE0367 SWALL:Q8RCQ1 (EMBL:AE013010) (314 FT aa) fasta scores: E(): 4e-52, 47.89% id in 309 aa, and to FT Oceanobacillus iheyensis methanol dehydrogenase regulatory FT protein Ob0713 SWALL:Q8ESC7 (EMBL:AP004595) (321 aa) fasta FT scores: E(): 1.1e-50, 45.65% id in 311 aa" FT /db_xref="GOA:Q5LHI4" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011703" FT /db_xref="InterPro:IPR016366" FT /db_xref="UniProtKB/TrEMBL:Q5LHI4" FT /protein_id="CAH06396.1" FT /translation="MHGEETPRTDLTLFSEKMQELKSRIASVIVGQERTVDLVLTAILA FT NGHVLIEGVPGVAKTLLARLTARLIDADFSRVQFTPDLMPSDVLGTTVFNMKTNEFDFH FT RGPVFANIILVDEINRAPAKTQSALFEVMEERQASIDGTTYRMGELYTILATQNPVEQE FT GTYKLPEAQLDRFLMKITMDYPSLDEEINILERHHTNAALVKLEEIQPVITREELLSLR FT RLTEKVFVDRTLLQYIALIAQQTRTSKAVYLGASPRASVAMLQASKAYALLQGRDFVTP FT EDIKFVAPYVLQHRLILTAEAEMEGYSPVKVTQRLIDKVEVPK" FT CDS 785846..787156 FT /transl_table=11 FT /locus_tag="BF9343_0618" FT /old_locus_tag="BF0652" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2211 SWALL:AAO77318 (EMBL:AE016935) FT (436 aa) fasta scores: E(): 4.8e-141, 80.04% id in 436 aa, FT and to Pseudomonas syringae conserved hypothetical protein FT PSPTO4334 SWALL:AAO57785 (EMBL:AE016871) (447 aa) fasta FT scores: E(): 3.7e-35, 31.65% id in 398 aa, and to FT Synechocystis sp. hypothetical protein Slr2013 SWALL:P73233 FT (EMBL:D90904) (435 aa) fasta scores: E(): 9.4e-34, 29.66% FT id in 445 aa" FT /db_xref="GOA:Q5LHI3" FT /db_xref="InterPro:IPR002881" FT /db_xref="UniProtKB/TrEMBL:Q5LHI3" FT /protein_id="CAH06397.1" FT /translation="MFLTKRFYILVLVVILLLGGGYLFGSLFIIGQLGLLALLLALAFD FT GYLLYRTKGIQAFRQCAGRFSNGDDNEVSLRIESRYSYPVRLIVIDEVPVIFQQRNVHF FT ELSLLPNEGKTLTYRLRPTRRGEYGFGFIRVFTTTRIGLISRRATCGRPETVKVYPSYL FT MLHRYELLAMSDNLTELGIKRIRRAGHQTEFEQIKEYVKGDDYRTINWKASARRHQLMV FT NVYQDERSQQIYSVIDKGRVMQQAFRGMTLLDYAINASLVLSYVAMRKDDKAGLVTFNE FT YFDTFVPASKQVGQMQTLLENLYKQETTFGETDFSALCGHLGKHVNKRSFLVLYTNFSN FT MTSLNRQLVYLQQLARQHRVLVVFFEDADLKEYIAGKSVTTEDYYRHVIAEKFAFEKRL FT IVSTLKQHGIYSLLTTPDKLSIDVINKYLEMKSRQLL" FT misc_feature 785846..785920 FT /note="Signal peptide predicted for BF0652 by SignalP 2.0 FT HMM (Signal peptide probability 0.992) with cleavage site FT probability 0.681 between residues 25 and 26" FT misc_feature order(785864..785917,785927..785995) FT /note="2 probable transmembrane helices predicted for FT BF0652 by TMHMM2.0 at aa 7-24 and 28-50" FT misc_feature 786212..786529 FT /note="Pfam match to entry PF01882 DUF58, Protein of FT unknown function DUF58, score 103.3, E-value 3.9e-28" FT CDS complement(787148..787369) FT /transl_table=11 FT /locus_tag="BF9343_0619" FT /old_locus_tag="BF0653" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2208 SWALL:AAO77315 (EMBL:AE016935) (74 aa) fasta FT scores: E(): 4.6e-19, 75.75% id in 66 aa" FT /db_xref="GOA:Q5LHI2" FT /db_xref="UniProtKB/TrEMBL:Q5LHI2" FT /protein_id="CAH06398.1" FT /translation="MAPQYFVQGIFATAGLIALLASILNWNWFFTAQNAQLIVRNVGRR FT RARLFYGLLGVIMIGIAVFFLNTQPVSE" FT misc_feature complement(order(787157..787225,787283..787342)) FT /note="2 probable transmembrane helices predicted for FT BF0653 by TMHMM2.0 at aa 10-29 and 49-71" FT CDS complement(787381..787800) FT /transl_table=11 FT /locus_tag="BF9343_0620" FT /old_locus_tag="BF0654" FT /product="putative ATP/GTP-binding transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT ATPase/GTPase BT2207 SWALL:AAO77314 (EMBL:AE016935) (137 FT aa) fasta scores: E(): 1.1e-44, 95.55% id in 135 aa, and to FT Thermoanaerobacter tengcongensis predicted ATPase or kinase FT TTE0535 SWALL:Q8RCA1 (EMBL:AE013024) (151 aa) fasta scores: FT E(): 2.9e-14, 38.93% id in 131 aa, and to Fusobacterium FT nucleatum ATP/GTP hydrolase FN0929 SWALL:Q8RF01 FT (EMBL:AE010600) (153 aa) fasta scores: E(): 1.8e-13, 38.68% FT id in 137 aa" FT /db_xref="GOA:Q5LHI1" FT /db_xref="InterPro:IPR003442" FT /db_xref="UniProtKB/TrEMBL:Q5LHI1" FT /protein_id="CAH06399.1" FT /translation="MEIKIQSLEQIHEAAREFISAMGDNTVFALYGKMGAGKTTFVKAL FT CEELGVSDVITSPTFAIVNEYRSDENGELIYHFDFYRIKKLSEVYDMGYEDYFYSGALC FT FIEWPELVEELLPGDAVKVTIEELEDGTRKIVIND" FT misc_feature complement(787396..787758) FT /note="Pfam match to entry PF02367 UPF0079, Uncharacterised FT P-loop hydrolase UPF0079, score 132.0, E-value 9.2e-37" FT misc_feature complement(787684..787707) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(787815..788624) FT /transl_table=11 FT /locus_tag="BF9343_0621" FT /old_locus_tag="BF0655" FT /product="putative ABC transporter membrane protein" FT /note="Similar to Streptococcus mutans component of ABC FT transporter SloB SWALL:Q9KIJ4 (EMBL:AF232688) (279 aa) FT fasta scores: E(): 3.3e-25, 32.22% id in 270 aa, and to FT Bacteroides thetaiotaomicron zinc ABC transporter, permease FT BT2206 SWALL:AAO77313 (EMBL:AE016935) (269 aa) fasta FT scores: E(): 1.5e-84, 85.82% id in 268 aa, and to FT Methanosarcina mazei zinc ABC transporter, permease protein FT MM1335 SWALL:Q8PX87 (EMBL:AE013366) (274 aa) fasta scores: FT E(): 8.5e-45, 47.56% id in 267 aa" FT /db_xref="GOA:Q5LHI0" FT /db_xref="InterPro:IPR001626" FT /db_xref="UniProtKB/TrEMBL:Q5LHI0" FT /protein_id="CAH06400.1" FT /translation="MNLLQYTFFQHALLGSLLASIACGIIGTYIVTRRLVFISGGITHA FT SFGGIGLGLYAGISPILSAAVFSVLSAFGVEWLSKRKDMREDSAIAMFWTLGMALGIMF FT SFLSPGFAPDLSAYLFGNILTITQTDLLMLGILAILLILFFTLFIHPIIYVAFDREFAR FT SQGIPVVVLEYILMMFIALTIVSCLRMVGIVLAISLLTIPQMTANLFTNKFKRIIWLSI FT AIGYLSCLGGLLISYRLNVPSGASIIFFSILIYIACKIGKSLFRKKQ" FT misc_feature complement(order(787830..787898,787908..787976, FT 787989..788057,788070..788129,788163..788231, FT 788289..788357,788418..788486,788529..788588)) FT /note="8 probable transmembrane helices predicted for FT BF0655 by TMHMM2.0 at aa 13-32, 47-69, 90-112, 132-154, FT 166-185, 190-212, 217-239 and 243-265" FT misc_feature complement(787839..788612) FT /note="Pfam match to entry PF00950 ABC-3, ABC 3 transport FT family, score 282.4, E-value 5e-82" FT CDS complement(788663..789085) FT /transl_table=11 FT /locus_tag="BF9343_0622" FT /old_locus_tag="BF0656" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2205 SWALL:AAO77312 (EMBL:AE016935) (141 aa) FT fasta scores: E(): 1.6e-40, 77.37% id in 137 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHH9" FT /protein_id="CAH06401.1" FT /translation="MWILIVGLVLLAIVAMIAGYIRNKRLQKKIDNGELDSFPEVKEVD FT VECCGQHEVCERDSLLAAVSKQIEYYDDEELDTFIGRAPEDYTPEEADKFRDVFYTMQD FT TDVAGWVRSLQLRGISLPDEIKDEVFLVVGERRIHP" FT misc_feature complement(788921..788944) FT /note="PS00118 Phospholipase A2 histidine active site." FT misc_feature complement(789023..789076) FT /note="1 probable transmembrane helix predicted for BF0656 FT by TMHMM2.0 at aa 4-21" FT CDS 789188..790189 FT /transl_table=11 FT /locus_tag="BF9343_0623" FT /old_locus_tag="BF0657" FT /product="putative aminopeptidase" FT /note="Similar to Streptomyces coelicolor putative FT aminopeptidase sco4589 or scd20.07C SWALL:Q9F2X2 FT (EMBL:AL939120) (324 aa) fasta scores: E(): 2.4e-08, 34.55% FT id in 191 aa, and to Bacteroides thetaiotaomicron FT aminopeptidase BT2189 SWALL:AAO77296 (EMBL:AE016935) (340 FT aa) fasta scores: E(): 1.1e-109, 80.06% id in 331 aa, and FT to Xanthomonas axonopodis hypothetical protein Xac0026 FT SWALL:Q8PRD7 (EMBL:AE011625) (598 aa) fasta scores: E(): FT 1e-14, 35.64% id in 202 aa" FT /db_xref="GOA:Q5LHH8" FT /db_xref="InterPro:IPR007484" FT /db_xref="UniProtKB/TrEMBL:Q5LHH8" FT /protein_id="CAH06402.1" FT /translation="MKRKHLITVLMWCVATTLCAQTPVEKGLKSINRQAAEAYIGFLAD FT DELQGREAGFHGSRVAARYIASLLKEMGIRPLGESYYQPFDAYRKERQQKGRLEVHPDS FT IAKLKQVVHQKLSMNNVLGMIPGKKTNEYVIVGAHFDHLGIDPALDGDQIYNGADDNAS FT GVSAVLQIAKAFVVSGQQPERNVIFAFWDGEEKGLLGSKYFVQECPFINQVKGYLNFDM FT IGRNNQPQNPKHVVYFYTEANPAFGRWLKEDIKKYGLQLEPNYRPWDKPVGGSDNGSFA FT KAGIPIIWYHTDGHPDYHQPSDHADRLNWDKVVEISKASFLNVWNLANEKDY" FT misc_feature 789188..789247 FT /note="Signal peptide predicted for BF0657 by SignalP 2.0 FT HMM (Signal peptide probability 0.979) with cleavage site FT probability 0.793 between residues 20 and 21" FT misc_feature 789506..790186 FT /note="Pfam match to entry PF04389 Peptidase_M28, Peptidase FT family M28, score 114.1, E-value 2.3e-31" FT CDS 790197..791369 FT /transl_table=11 FT /locus_tag="BF9343_0624" FT /old_locus_tag="BF0658" FT /product="conserved hypothetical protein" FT /note="Similar to Bradyrhizobium japonicum BLL5531 protein FT SWALL:BAC50796 (EMBL:AP005955) (403 aa) fasta scores: E(): FT 2.9e-28, 31.26% id in 355 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHH7" FT /protein_id="CAH06403.1" FT /translation="MKTKLTNCVKTVLLSFMLGVLFACCQGAASSGNAGKNASRVRIAS FT NDSAKLVPDKALNDASCVLAGLPVDKASGKLYALTRTKEWKNHARYMDQIWNVFRQTAP FT RLVAFSQTELEDINTRCHTLFYPFGGPDFLFANAFFPEMDTYVLIGLEPAGTAPKVKHP FT SAETYRLYQNAVSNVLNLSFFNDMDKELANDTIDGVVPIYSLLMARGNRKIVSIQEVWL FT SETGDLFERKEGDTIRNTCSAGMEVRFFRPGASRLQTLYYFCTDISNEGLQANRPLQAF FT MDRFDAETTATFVKSASYLMHEPAFSRIRETILQKSSAVVQDDSSIPLSCFDPEVWSVT FT LYGTFYKPISTFSQYLQPQLRDAYQLGDPNPLNFRIGYARQSNLQVARRK" FT misc_feature 790197..790286 FT /note="Signal peptide predicted for BF0658 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.295 between residues 30 and 31" FT misc_feature 790236..790268 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 791520..793805 FT /transl_table=11 FT /locus_tag="BF9343_0625" FT /old_locus_tag="BF0659" FT /product="putative alpha-1,2-mannosidase precursor" FT /note="Similar to Bacillus sp. M-90 alpha-1,2-mannosidase FT precursor aman2 from codon 406 to codon codon 745 FT SWALL:Q9WXI8 (EMBL:AB025248) (1976 aa) fasta scores: E(): FT 8.8e-33, 31.45% id in 744 aa, and to Bacteroides FT thetaiotaomicron alpha-1,2-mannosidase BT2199 FT SWALL:AAO77306 (EMBL:AE016935) (758 aa) fasta scores: E(): FT 0, 78.89% id in 744 aa, and to Bacteroides thetaiotaomicron FT putative alpha-1,2-mannosidase BT3990 SWALL:AAO79095 FT (EMBL:AE016943) (755 aa) fasta scores: E(): 2.4e-168, FT 50.53% id in 754 aa" FT /db_xref="GOA:Q5LHH6" FT /db_xref="InterPro:IPR005887" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012939" FT /db_xref="UniProtKB/TrEMBL:Q5LHH6" FT /protein_id="CAH06404.1" FT /translation="MRKNFSTILIVGAALLLASCVQQKESFSPVDYVNPLMGTESTYAF FT SHGNTYPAVAVPWGMNFWSPQTGENGSGWMYTYTDSLIRGFRQTHQPSPWINDYGTFSI FT MPLSGVLKMDHKERGVLFSHTQEAAAPYSYSVTFADGLRTELSATSRGAVFEVTFPQDS FT AQYIVVDAYNGGSALTIDRENRCVTGVARNHNGGVPDNFANYFRIEFSHPIAEEGVYDG FT DTLMRHRPTLESDYTCAYLRFNVPAGEKLTVRTASSFISPAQALVNFSREVGGKSLAQV FT REEARKQWNSYLGRIEAEGGSEEQLRTFYSCLYRTLLFPREFYEFDAQGKPVYYSPYNG FT KIQDGYMYTDNGFWDTFRAVHPLFTLLYPEVSERVTQSILNAYDESGFMPEWASPGHRE FT CMIGNNSISLLTDAWMKGIRTICPEKALEAMIHQTEARHPGISSVGRDGFGYYDRLGYV FT PYPEVHEATAKTLEYAYADWCVARFADSIGRKEIADTYYRKALNYRNLYYPDYGFMWAK FT DANGKWRDAFDATEWGGPFTEGSSWHWTWSVLHDPEGLSRLMGGHTAMEARLDSMFTAP FT NTYNYGTYGFVIHEIAEMVALDMGQYAHGNQPVQHAIYLYDYIGRPWKAQKHVREVMDK FT LYHSGSKGYCGDEDNGQTSAWYVFSAMGFYPVCPGVPEYAMGSPLFPKLTLHLPDGKNF FT TVKAEGNSPANRYIGKALLNESEFTRNYLTHRELTSGGELVLWMDSVPDSRRGTQKKDL FT PYSYSNEH" FT misc_feature 791520..791588 FT /note="Signal peptide predicted for BF0659 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.664 between residues 23 and 24" FT misc_feature 791547..791579 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 792957..793004 FT /note="PS00216 Sugar transport proteins signature 1." FT CDS 793846..796512 FT /transl_table=11 FT /locus_tag="BF9343_0626" FT /old_locus_tag="BF0660" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2204 SWALL:AAO77311 (EMBL:AE016935) (857 aa) FT fasta scores: E(): 6.1e-105, 44.16% id in 874 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT1770 FT SWALL:AAO76877 (EMBL:AE016933) (855 aa) fasta scores: E(): FT 1.9e-29, 23.39% id in 859 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT3853 SWALL:AAO78958 FT (EMBL:AE016942) (857 aa) fasta scores: E(): 1.5e-14, 23.01% FT id in 895 aa" FT /db_xref="GOA:Q5LHH5" FT /db_xref="InterPro:IPR015915" FT /db_xref="UniProtKB/TrEMBL:Q5LHH5" FT /protein_id="CAH06405.1" FT /translation="MLHYETDDAFIEEQYMRRLGCLFAIGMMWLCIVDCFSQGLLFYGN FT EKRISERATYSVLREGHERTFTNAFRISFDYLVRNVESPGYILYLEDRDAGKTYSFTYL FT HKPGDRCSFSFNEDGKRIFCTFELDKEDYDHRWLPVSIALDIPADCARITIGKRSKEIS FT NLGLEPTGFSPHIYFGKCEYILDVASYAIRNLSLTDGEEIMIFPLNESSGEDVHDSRGH FT VVGQVTNPVWLINQSYYWKELFTDYSSTPSGLNFDKTHQNILFFNQDSLSAFDLYTHEL FT SKTPYKTPLPVQLRLGMNFLDEASRELYTYEVADSHGDAMVAVLDLTTKEWRPASSDYL FT CQQLHHHCGFFHPGERKFFLFGGYGSRRYSNTFLAYDLNTCRWDTLAFSGDRVIPRYFS FT GMAVSNDYKRVYLYGGMGNEAGDQNVGRNYLYDLYRIDMQTRSVQKLWEAKAPAVNRVV FT PRNMILSADEKHLFLLGYPEYLPNSTLQLYRLSVRDGECEAVGDSIPIVSEEIATNANL FT YFNEELNEFYCSVQEFEKHGQVTTRLYSLSAPPVTLDDVEYYSRRRNALNAGLLGAVVG FT GVLLLAACVWGIMHHKRRRDRMSAETASAGVRPEEVSDISEVPAVESPEVKEEEVEKEP FT SEWEELPAVLPPDKNAIFLFGMFTILDNAGRDITYMLSPKLRTIFLYILLNSVGKRGVL FT SSDMNQIFWPDKSGSNVKNLKGVSMNHVRKILQDVDGIELVYRNGYFCMVFGEEFYCDY FT IRLMNLTSPEKKKKETPGAIRAEWLEILLRGKFIPAAESDLFDYYKQKVETLIHSLLPG FT QLELAYRDARFSIVIRLCNILFIADPLSDLALAYTVCALRKQNNQEEAIRRYAAFTKDY FT RRVMNEEYGIAFADIKV" FT misc_feature order(793903..793971,795541..795609) FT /note="2 probable transmembrane helices predicted for FT BF0660 by TMHMM2.0 at aa 20-42 and 566-588" FT CDS 797339..800479 FT /transl_table=11 FT /locus_tag="BF9343_0627" FT /old_locus_tag="BF0661" FT /product="putative outer membrane protein" FT /note="Similar to Porphyromonas gingivalis receptor antigen FT RagA SWALL:Q9ZA60 (EMBL:AJ130872) (1017 aa) fasta scores: FT E(): 2.6e-51, 28.28% id in 1050 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT2805 SWALL:AAO77911 FT (EMBL:AE016937) (1083 aa) fasta scores: E(): 4.6e-117, FT 38.45% id in 1061 aa, and to Bacteroides thetaiotaomicron FT putative outer membrane protein, probably involved in FT nutrient binding BT4357 SWALL:AAO79462 (EMBL:AE016945) FT (1178 aa) fasta scores: E(): 9.8e-100, 37.39% id in 1075 FT aa" FT /db_xref="GOA:Q5LHH4" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LHH4" FT /protein_id="CAH06406.1" FT /translation="MFVLLSGMGLQPCLASHSYNAASAGVVQVEQQKQKITGCVLDVTG FT SPLPGASVLVKGAPGRGAITDMDGNFSVEAEQGEQLEISFIGMETQVVTVSAKTRLQIT FT LKEDSKTLDEVVVVGYGTQKKANLTGAVASVSAETLESRPITNLSQGLQGMIGNLNISA FT DNGAPGKGYGFNVRGTTSINSSGPLVLVDGVQMDPNMINPADVESVSVLKDAASASIYG FT TQAAYGVVLITTKKGKDEKAKISFSSNWSVNSPTRKPEYMDSWTFANFHNLTNRNSGGG FT DYYDKNYMDHIYAYYTDPKHNLPVFIDPSNPNKYLYCGNTDWIDETIKDNTLMQQYTLS FT LNGGSGKTAYYGSIGFLDQGGTLKHYDDKYRRFNVNLNLTSDVTNWLQVRLKTVYNNTY FT RDAPYGSNNSDETAQINSAFYGADLRPMMPVYHPDGNFSGQGSWTNMVATQAISGERKN FT KENDLWLTGGLKITPLKDWTINVDYTYNMYILSKKQHGKEILEHTANPDIVTVFPHTTP FT SRVKFTTDDNYYQTFNAYTDYSKSLGKHNIKLLLGYNYETKSYRWFNAERENLISNDLA FT GLGQAYGEKYNGSGQHSWATMGYFARINYNYDERYLLELNGRYDGSSKFPKDKRFVFFP FT SVSAAWRISSEAFFEPAKKIVDELKIRASYGSLGNQSVGGDYPYIATMGTNGEMGYLVD FT GKKIASVSPGGIVSPYLTWETVRQIDLGLDWALLNSRLYGTFDWYMRKTLDMVTNGTPL FT PAVLGTGAPQANTADLKTTGWELSMGWRDRVNKDFSYDVSFVLSDYQAEITKFNNPQNL FT LSTHYVGKKWGEIWGLVTEGLFQSAEEVSAHADQSEIYGGGWYPGDVKYKDLNGDGKIN FT KGKNTLDDPGDQKIIGNSEPRYSYGIKGGLQWRDFDFDVFFQGIGKKDVVLGGNQFWGF FT GNEWHVPFKHALDSWTEDNRNAYFPRSTYDNVTGNRETQTRYLQNAAYLRLKSITLGYS FT LPKALLAKWKIDHVRFYVSGQNLLTFDHLFDIYDPETVSLSTYPLTKSVSFGLNITL" FT misc_feature 797339..797401 FT /note="Signal peptide predicted for BF0661 by SignalP 2.0 FT HMM (Signal peptide probability 0.831) with cleavage site FT probability 0.739 between residues 21 and 22" FT misc_feature 797714..800476 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -6.7, E-value 0.00026" FT CDS 800493..802175 FT /transl_table=11 FT /locus_tag="BF9343_0628" FT /old_locus_tag="BF0662" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT0030 SWALL:AAO75137 (EMBL:AE016926) (609 aa) FT fasta scores: E(): 3.8e-47, 37.47% id in 619 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT1620 FT SWALL:AAO76727 (EMBL:AE016932) (618 aa) fasta scores: E(): FT 2.3e-20, 31.84% id in 628 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT0141 SWALL:AAO75248 FT (EMBL:AE016926) (579 aa) fasta scores: E(): 2.3e-19, 30.89% FT id in 602 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LHH3" FT /protein_id="CAH06407.1" FT /translation="MKKNKILLIAAVACTSMFSSCSDLLDLYPEDSLSDPKFWTSVQDL FT ELYANGFYGILPGAQGPGADDESDCYVNEKPKTWIFNLETIPTSGGGWGNGDWGNIRSC FT NYFMARYKQVKGDESQINRSVAVVRFFRAWEYVYKVKRFGDVPWYETELQMDSEELYKG FT RDSRKVVFTHILEDLDFAIEHLPKPNETKTGNMHKYAALAFKSRACLYEASFRKYHGLG FT DYEELYREAADAAAQVIEEGGYSIYKTDKPLQDYYNLFVQEDLASNSECIMPRVYITKL FT LMHNNTRQMEESYTGLSRAMFEQYLCADGLPTAVSPGYEEADMPMDELMQRDPRLRQTI FT DNPELPFKVLSDGTKQFNALPIIDTKYCTTGYYVMKYHSTDPEQWNIGQSTLDVFIFRY FT AEVLLNYAEAKAELGECTQEVLDQTVNELRDRVEMPHLKVNVGFTDPNWPDYGYELSPL FT LYEIRRERAVELVGEGFRWDDIVRWKAGKLLEAPKSMLGMKVSDKLKEQYDSFSRELTQ FT DNLLIVYPDRTTRKWDDKLYLHPLPIDETTMNPNLLPNNPGWE" FT misc_feature 800493..800558 FT /note="Signal peptide predicted for BF0662 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.698 between residues 22 and 23" FT misc_feature 800523..800555 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 802185..803150 FT /transl_table=11 FT /locus_tag="BF9343_0629" FT /old_locus_tag="BF0663" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron sialidase FT precursor, exo-alpha-sialidase BT2194 SWALL:AAO77301 FT (EMBL:AE016935) (316 aa) fasta scores: E(): 9.7e-41, 40.57% FT id in 313 aa, and to Bacteroides thetaiotaomicron putative FT chitobiase BT0865 SWALL:AAO75972 (EMBL:AE016929) (440 aa) FT fasta scores: E(): 6.1e-12, 29.66% id in 236 aa, and to FT Bacteroides thetaiotaomicron putative chitobiase BT4132 FT SWALL:AAO79237 (EMBL:AE016943) (392 aa) fasta scores: E(): FT 1.2e-11, 27.5% id in 280 aa" FT /db_xref="GOA:Q5LHH2" FT /db_xref="InterPro:IPR000421" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013728" FT /db_xref="UniProtKB/TrEMBL:Q5LHH2" FT /protein_id="CAH06408.1" FT /translation="MRRIMKQNILKAAILAAGFCCTVGCSDNDSDLTIYIPDAGTAVKA FT NFYIEDEPYVQTFNVAVTPETYPQLTEYGLPNDAVVHLQADPGKVDEYNAKNGTEYELL FT PEAAYDLTEEVLVKAGTPKSEEAVITVHAKGNIEAFKEYLLPVSITSVEGAVADHCCQT FT IYFIFRGSMDASNMELLDRTGWEALSASSEEPKEGDWGHSGLKEACLDGDLNTFWGTDW FT STQHPQPPHWIVIDLKKTTHIQGFACQAREEGYDGPKEVTVEVSDDNATWTVAAKFKDI FT PAQGEFRSFLPAAVDGRYLKVTITAVNGGPHVTISELNLF" FT misc_feature 802185..802262 FT /note="Signal peptide predicted for BF0663 by SignalP 2.0 FT HMM (Signal peptide probability 0.983) with cleavage site FT probability 0.611 between residues 26 and 27" FT misc_feature 802719..803138 FT /note="Pfam match to entry PF00754 F5_F8_type_C, F5/8 type FT C domain, score -24.6, E-value 0.00027" FT misc_feature 803112..803144 FT /note="PS00591 Glycosyl hydrolases family 10 active site." FT CDS 803179..804630 FT /transl_table=11 FT /locus_tag="BF9343_0630" FT /old_locus_tag="BF0664" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT2192 SWALL:AAO77299 (EMBL:AE016935) FT (484 aa) fasta scores: E(): 6.8e-175, 80.78% id in 484 aa, FT and to Clostridium perfringens hypothetical protein CPE1876 FT SWALL:Q8XJ85 (EMBL:AP003192) (750 aa) fasta scores: E(): FT 2e-72, 41.79% id in 457 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT4713 FT SWALL:AAO79818 (EMBL:AE016946) (580 aa) fasta scores: E(): FT 3.1e-69, 44.05% id in 429 aa" FT /db_xref="GOA:Q5LHH1" FT /db_xref="InterPro:IPR000421" FT /db_xref="InterPro:IPR000933" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LHH1" FT /protein_id="CAH06409.1" FT /translation="MNLRNFFLAAGIAAVAVPVWGQKAPEPYGLTPSARQVEWYNREMI FT AFFHFGINTFEEYVNEGDGRAPAAIFNPTALDCGQWMRTLQSAGIPSAIITAKHADGFC FT LWPSKYTDYGVKNSAWKNGKGDVVREFVDACEEYGIKAGIYLGPHDRHEHLSPLYTTEK FT YKQYYGHQLEELMGDYGKVWETWWDGAGADELTTPVYTHWYKIVREKQPDCVIFGTKNS FT YPFADVRWMGNESGKAGDPCWSTTDSVCVRDEWKNYEGLNEGVKGGDAYIPAETDVSIR FT PSWFYHAEEDSRVKSVKELWDIYCTSVGHNSVLLLNFPPDRRGLIHPTDSLHAALLKQG FT LDETFGNNLLAKAKVKATNGRGGKFRPEFLTDNNKETYFAGRDGAKTSDIVFTLPRQTE FT FDCLMIQEVIELGHRTTKWSVEYSNDGRNWTPIPEATDKQTVGYKWIVRFEPVKAKQVR FT LRILDGFACPAIHTFGVYKQSALFQ" FT misc_feature 803179..803241 FT /note="Signal peptide predicted for BF0664 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.989 between residues 21 and 22" FT misc_feature 804571..804591 FT /note="PS00290 Immunoglobulins and major histocompatibility FT complex proteins signature." FT CDS 805240..808302 FT /transl_table=11 FT /locus_tag="BF9343_0631" FT /old_locus_tag="BF0665" FT /product="putative beta-galactosidase" FT /note="Similar to Lactobacillus delbrueckii FT beta-galactosidase LacZ SWALL:BGAL_LACDE (SWALL:P20043) FT (1006 aa) fasta scores: E(): 2.7e-62, 33.33% id in 1065 aa, FT and to Escherichia coli beta-galactosidase LacZ or B0344 FT SWALL:BGAL_ECOLI (SWALL:P00722) (1023 aa) fasta scores: FT E(): 7.5e-62, 32.79% id in 1043 aa" FT /db_xref="GOA:Q5LHH0" FT /db_xref="InterPro:IPR004199" FT /db_xref="InterPro:IPR006101" FT /db_xref="InterPro:IPR006102" FT /db_xref="InterPro:IPR006103" FT /db_xref="InterPro:IPR006104" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR011013" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013812" FT /db_xref="InterPro:IPR014718" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR023230" FT /db_xref="InterPro:IPR023232" FT /db_xref="UniProtKB/TrEMBL:Q5LHH0" FT /protein_id="CAH06410.1" FT /translation="MKSNLKVVAEAFKTRSDNDWENERIFAVNKEEGRSTFVPFADTEE FT MKSDPSYTRPWIRNQSSRYLLLNGDWKFHWVKQPSERPVDFYKPGYDVSAWKEIPVPSN FT WEMLGYGTPIYTNITYPIRNNPPFIQGQRGYTVEKEPNAVGSYRREFSLPADWKNKEVF FT IHFDGVYSAMYLWINGKKVGYSQGANNDAEFNITQYVKPGKNILAVEVYRWSDGSYLED FT QDMFRLSGIHRDVYLVATPKLRLRDVHLTSVISDRFDKADLCVKADVKNYGKSAVNASV FT RIALLDAGGKTLRTFTTAVGNLAAGKEICLPAKASIRDPQLWSAETPYLYTVNLELLDA FT SGKVLEATTQQYGFRKIEIRDNKVYINDALVLFKGANRHDIHPRFGKAVPVESMIEDIL FT LFKRFNLNTIRTSHYPNDPKMYALFDYYGLYVMDEADLECHGNMMLTKRESWKEAFVDR FT VVRMVERDKNHPSVIFWSMGNESGGGPNFEAAYQAAREIDARFIHYEGMNDVADMDSRM FT YPSIESMIAQDNEPRNKPFFLCEYAHAMGNAVGNLEEYWDYIANQSKRMIGGCIWDWVD FT QGINKPGEAPDRYYFGGSFGDRPNDNDFCCNGLVTPDRRVTPKLWEVKKVYQYMTFEEV FT GENNVGLRNHYSFLNMRHFNLRYVILKDGVPVAEEEFGLPDGKPGEHRTIHIPYLRHLT FT EDADYHINLEVKLKHDCVWAKAGHVVATEQFLLRERKQKTEVPELSASLQVVEERQYIR FT FRAPGTEISFDSKTGMMIGLRYDGQNMIHGQQGPALNWYRSISNDPREWIQPVVVLRGF FT DWKLAEDGKSASVQSQIEVKVGQVNIPYTVRYRVYSNGRVDVAADFTTESNFDLPRLGL FT QMFLNPSLEQVEWYGRGPMENYRDRKNAAYMGCYKTTVMDMAEHYARAQTMGERTDTHW FT LALTDGQGKGLRITATDTLDFSAQHYTDKDLWQVKYGHDLSDIRRAEVVLNLDCIQRGL FT GNASCGPGPRPHYEIRKDTVYSYSFRMEPLR" FT misc_feature 805378..805962 FT /note="Pfam match to entry PF02837 Glyco_hydro_2_N, FT Glycosyl hydrolases family 2, sugar binding domain, score FT 248.7, E-value 7.1e-72" FT misc_feature 805966..806304 FT /note="Pfam match to entry PF00703 Glyco_hydro_2, Glycosyl FT hydrolases family 2, immunoglobulin-like beta-sandwich FT domain, score 49.6, E-value 6e-12" FT misc_feature 806308..807135 FT /note="Pfam match to entry PF02836 Glyco_hydro_2_C, FT Glycosyl hydrolases family 2, TIM barrel domain, score FT 356.5, E-value 2.5e-104" FT misc_feature 806458..806535 FT /note="PS00719 Glycosyl hydrolases family 2 signature 1." FT misc_feature 806635..806679 FT /note="PS00608 Glycosyl hydrolases family 2 acid/base FT catalyst." FT misc_feature 807457..807957 FT /note="Pfam match to entry PF02929 Bgal_small_N, Beta FT galactosidase small chain, N terminal domain, score 61.9, FT E-value 1.2e-15" FT misc_feature 807598..807627 FT /note="PS00152 ATP synthase alpha and beta subunits FT signature." FT misc_feature 807985..808287 FT /note="Pfam match to entry PF02930 Bgal_small_C, Beta FT galactosidase small chain, C terminal domain, score 80.7, FT E-value 2.6e-21" FT CDS complement(808448..809680) FT /transl_table=11 FT /gene="aroA" FT /locus_tag="BF9343_0632" FT /old_locus_tag="BF0666" FT /product="putative 3-phosphoshikimate FT 1-carboxyvinyltransferase" FT /EC_number="2.5.1.19" FT /note="Similar to Haemophilus somnus 3-phosphoshikimate FT 1-carboxyvinyltransferase AroA SWALL:AROA_HAESO FT (SWALL:P52310) (432 aa) fasta scores: E(): 9.4e-36, 34.65% FT id in 430 aa, and to Bacteroides thetaiotaomicron FT 3-phosphoshikimate 1-carboxyvinyltransferase BT2186 FT SWALL:AAO77293 (EMBL:AE016935) (410 aa) fasta scores: E(): FT 1e-122, 77.03% id in 405 aa, and to Vibrio vulnificus FT 3-phosphoshikimate 1-carboxyvinyltransferase Vv12127 FT SWALL:Q8DAR4 (EMBL:AE016804) (376 aa) fasta scores: E(): FT 8.2e-37, 34.12% id in 378 aa" FT /db_xref="GOA:Q5LHG9" FT /db_xref="HSSP:1P89" FT /db_xref="InterPro:IPR001986" FT /db_xref="InterPro:IPR006264" FT /db_xref="InterPro:IPR013792" FT /db_xref="InterPro:IPR023193" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHG9" FT /protein_id="CAH06411.1" FT /translation="MRYLLSAPSQIKATIQLPASKSISNRALIIHALSKGDDVPSNLSD FT CDDTQVMIKALTEGNEVIDILAAGTAMRFLTAYLSSTPGIHTITGTERMQQRPIQILVN FT ALRELGAHIEYVRNEGFPPLRIEGRELTGSEITLKGNVSSQYISALLMIGPVLKNGLQL FT RLTGEIVSRPYINLTLQLMKDFGASASWTSDQNIQVDPQPYHCLPFTVESDWSAASYWY FT QIAALSPQADIELTGLFRHSYQGDSRGAEVFARLGVATEYTETGIRLKKNGTCVERLDE FT DFVDIPDLAQTFVVTCALLNVPFRFTGLQSLKIKETDRIEALKTEMKKLGYILHDKNDS FT ILSWDGERVEQQTCPVIKTYEDHRMAMAFAPAAIHYPTIQIDEPQVVSKSYPGYWDDLR FT KAGFGIKVGEE" FT misc_feature complement(808487..809668) FT /note="Pfam match to entry PF00275 EPSP_synthase, EPSP FT synthase (3-phosphoshikimate 1-carboxyvinyltransferase), FT score 245.5, E-value 6.5e-71" FT misc_feature complement(808688..808744) FT /note="PS00885 EPSP synthase signature 2." FT CDS 809965..810840 FT /transl_table=11 FT /locus_tag="BF9343_0633" FT /old_locus_tag="BF0667" FT /product="putative AraC-family regulatory protein" FT /note="Similar to Bacteroides thetaiotaomicron AraC-type FT transcription regulator BT1235 SWALL:Q8A8D2 (EMBL:AE016931) FT (300 aa) fasta scores: E(): 7.7e-28, 33.45% id in 284 aa, FT and to Porphyromonas gingivalis transcriptional regulator, FT AraC family PG2125 SWALL:AAQ67080 (EMBL:AE017179) (292 aa) FT fasta scores: E(): 4.3e-18, 27.85% id in 280 aa" FT /db_xref="GOA:Q5LHG8" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:Q5LHG8" FT /protein_id="CAH06412.1" FT /translation="MPNRDSEKLITDGYTTTLLGDELMVCENMKHIRVTSVPSYTEVGM FT IILCLRGTAKICIFDNIHILAKNELAVILPGQLVSITELSPDFLCNIVVLSRALFDDTL FT SGFSRFSPLFFVYMRSHYWYELTGEEIERFKLFYGSLSQRAKDPTHFFRRESVLLLLRI FT FYLDIYNEYYSKSHLMKGGSDMGKSKLAHDFFCLIMQHYREHKDVAFYADKLCITSKYL FT SMVIKEASGKTAKDWIVEYAILEIKAMLKNSTMNIQEISIKTNFANQSSLGRFFRKHTG FT MTLTEYRMHR" FT misc_feature 810505..810528 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 810700..810831 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 24.3, E-value 0.00025" FT CDS 810853..812022 FT /transl_table=11 FT /locus_tag="BF9343_0634" FT /old_locus_tag="BF0668" FT /product="putative histidine kinase" FT /note="Similar to the C-terminal region of Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase BT1264 SWALL:Q8A8A3 (EMBL:AE016931) (1039 aa) fasta FT scores: E(): 3.5e-59, 45.64% id in 379 aa, and of FT Rhodopirellula baltica sensory transduction histidine FT kinase RB8873 SWALL:Q7UME9 (EMBL:BX294148) (801 aa) fasta FT scores: E(): 1.2e-27, 31.67% id in 382 aa" FT /db_xref="GOA:Q5LHG7" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:Q5LHG7" FT /protein_id="CAH06413.1" FT /translation="MKQEKQTELLRTQQMLNEVNRKLLMTLGVAEVFPWKWELAEHMVW FT FDARPSDDPAGWEIFHNDSFPVSIARVYQGIYKEDRLRVIEACRGILKGKMKKVVVELR FT FWAKKREGFVLEWLEMHAIPGKVDENGRLLTVEGSLMSITRRKVMEEELTAAKEKAEEA FT NRLKSALIANMNHEIRTPLNAIVGFASLLSIIDDEKEQQEYIGLIQSNTEHLLRLMNDV FT IDLSNIESGVMDIVGSDVVLDSLMKEMELTYVPKAETNNLVLAWDREQSNAHIYTDRDR FT LIQILEHLLDNAIKFTTKGTVHWGYQEKENGQIRFYVTDTGCGIPNDKKEVIFERFVKL FT DSFTQGLGLGLSLCKIIIERMHGTIGVESEVGEGSTFWFTIPNLSDNHI" FT misc_feature 811348..811545 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 75.5, E-value 9.4e-20" FT misc_feature 811681..812004 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 123.0, FT E-value 4.7e-34" FT CDS 812300..814261 FT /transl_table=11 FT /locus_tag="BF9343_0635" FT /old_locus_tag="BF0669" FT /product="putative glycosyl hydrolase, FT beta-N-acetylhexosaminidase" FT /note="Similar to Streptomyces avermitilis FT beta-N-acetylhexosaminidase SWALL:Q93HN3 (EMBL:AB070936) FT (513 aa) fasta scores: E(): 1.2e-17, 27.38% id in 493 aa, FT and to Bacteroides thetaiotaomicron beta-N-hexosaminidase, FT glycosyl hyrolase family 20 BT3868 SWALL:AAO78973 FT (EMBL:AE016942) (661 aa) fasta scores: E(): 1.1e-191, FT 71.12% id in 651 aa, and to Clostridium perfringens FT hypothetical protein CPE1364 CPE1364 SWALL:Q8XKN0 FT (EMBL:AP003190) (1471 aa) fasta scores: E(): 1.2e-73, FT 36.99% id in 665 aa" FT /db_xref="GOA:Q5LHG6" FT /db_xref="InterPro:IPR001540" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR015883" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LHG6" FT /protein_id="CAH06414.1" FT /translation="MKFVNRFFMILVALCLVCPGVSAVVNPKPFVIPELKEWKGAEGAF FT VPTETTKIVCPANQPELLRIARMLADDCETMFGHKPEVVQGKGGAGDVILAIRADKKLG FT KEGYTVKVTDRILLTAPESIGVYWGTRTLLQIAEQSENHQFPKGTLRDFPDYAMRGFMI FT DCGRKFIPLSFLQDYVKIMAYYKMNTLQIHLNDNGFKQFFGHDWSKTYAAFRLESDTYP FT GLAAEDGYYTKREFIDLQKLAENLYVEIIPEIDAPAHTLAFTHYKPEIGSKEYGMDHLD FT LFNPETYKFMDGLFKEYLEGDEPVFRGKKVHIGTDEYSNKKKDVVEKFRAFTDHYIRYV FT ESFGKQACVWGALTHAKGDTPVKSENVIMSAWYNGYANPKDMIEQGYKLISIPDGLVYI FT VPAAGYYYDYLNTKYLYENWTPVQIGKAVFPEKDPSILGGMFAVWNDHVGNGISTKDIH FT HRVYPALQTLAVKMWTGKDVSVPYADFDKQRNAISEAPGVNQLGRIGTTPGLVYEQASV FT APNSETPHREIGYDYLVTFDIDGANEAKGTELFRSPDAVFYLSDPIRGMLGFARDGYLN FT TFSHRIHKGEKATIGISGDNKSTRLLINGQVVEEMNTQKLYYNAGKDSMNYVRTLVFPL FT EKAGKFDSKITNLKVYKK" FT misc_feature 812300..812368 FT /note="Signal peptide predicted for BF0669 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.910 between residues 23 and 24" FT misc_feature 812318..812377 FT /note="1 probable transmembrane helix predicted for BF0669 FT by TMHMM2.0 at aa 7-26" FT misc_feature 812765..813730 FT /note="Pfam match to entry PF00728 Glyco_hydro_20, Glycosyl FT hydrolase family 20, catalytic domain, score -7.6, E-value FT 3.9e-15" FT CDS complement(814497..815585) FT /transl_table=11 FT /locus_tag="BF9343_0636" FT /old_locus_tag="BF0670" FT /product="putative transmembrane acyltransferase protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT1850 SWALL:AAO76957 (EMBL:AE016933) FT (362 aa) fasta scores: E(): 3.3e-135, 86.18% id in 362 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT2255 SWALL:AAO77362 (EMBL:AE016935) (386 aa) FT fasta scores: E(): 4.3e-22, 30.41% id in 388 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT4450 SWALL:AAO79555 (EMBL:AE016945) (411 aa) fasta FT scores: E(): 6.3e-11, 29.88% id in 415 aa" FT /db_xref="GOA:Q5LHG5" FT /db_xref="InterPro:IPR002656" FT /db_xref="UniProtKB/TrEMBL:Q5LHG5" FT /protein_id="CAH06415.1" FT /translation="MKRIVFLDYVRVFACFLVMIVHSSENFYGAAGSTDMAGPQSYLAS FT EADRLWVAVYDGFSRMAVPLFMIVSAFLLAPMKEEQTTWQFYRQRFLRIIPPFFIFMIL FT YSTLPMLWGQINGETSLTDLSRIFLNFPTLAGHLWFMYPLISLYLFIPIISPWLRKASA FT KEERFFIGLFLLSTCIPYLNRWCGEVWGQCFWNEYHMLWYFSGYLGYLVLAHYIHTHLT FT WSRSKRFIIGTILMVIGAVLTIYSFYSQAIPGETLSTPVIEIGWAFCTINCVLLTAGTF FT LMFTCINSSKAPRIITEMSKLSYGMYLMHIFWLGLWATVFKYTLALPTVAAIPCIAIST FT FICCFITSKLISFIPGSKWIIG" FT misc_feature complement(814512..815582) FT /note="Pfam match to entry PF01757 Acyl_transf_3, FT Acyltransferase family, score -1.7, E-value 3.5e-07" FT misc_feature complement(order(814545..814613,814623..814676, FT 814734..814802,814830..814898,814935..814988, FT 815031..815084,815121..815189,815247..815315, FT 815364..815432,815490..815549)) FT /note="10 probable transmembrane helices predicted for FT BF0670 by TMHMM2.0 at aa 13-32, 52-74, 91-113, 133-155, FT 168-185, 200-217, 230-252, 262-284, 304-321 and 325-347" FT tRNA complement(815932..816009) FT /note="tRNA Pro anticodon GGG, Cove score 65.93" FT CDS complement(816295..816690) FT /transl_table=11 FT /locus_tag="BF9343_0637" FT /old_locus_tag="BF0671" FT /product="conserved hypothetical protein" FT /note="Similar to Anabaena sp. hypothetical protein Asr7520 FT SWALL:Q8ZSJ0 (EMBL:AP003602) (80 aa) fasta scores: E(): FT 0.0071, 40.35% id in 57 aa, however, CDS is extended at the FT C-terminus" FT /db_xref="UniProtKB/TrEMBL:Q5LHG4" FT /protein_id="CAH06416.1" FT /translation="MKQRVTSNHIERLQPNEIFVFGSNLSGHHGGGAALLAMNKWGAIW FT GQGVGLQGQTYGIPTMQGGVETIRPYVDEFIQFANKHPEMTFLVTEIGCGIAGFTPQEI FT APLFAKATTTENIHLPQRFWDLLERIP" FT CDS complement(816703..817764) FT /transl_table=11 FT /gene="aroB" FT /locus_tag="BF9343_0638" FT /old_locus_tag="BF0672" FT /product="putative 3-dehydroquinate synthase" FT /EC_number="4.2.3.4" FT /note="Similar to Bacillus subtilis 3-dehydroquinate FT synthase AroB or BSU22700 SWALL:AROB_BACSU (SWALL:P31102) FT (362 aa) fasta scores: E(): 8.2e-27, 33.62% id in 342 aa, FT and to Bacteroides thetaiotaomicron 3-dehydroquinate FT synthase BT3975 SWALL:AAO79080 (EMBL:AE016943) (353 aa) FT fasta scores: E(): 5.9e-118, 85.26% id in 353 aa, and to FT Oceanobacillus iheyensis 3-dehydroquinate synthase AroB or FT ob1784 SWALL:Q8EQB7 (EMBL:AP004599) (359 aa) fasta scores: FT E(): 8.4e-34, 37.57% id in 354 aa" FT /db_xref="GOA:Q5LHG3" FT /db_xref="InterPro:IPR016037" FT /db_xref="UniProtKB/TrEMBL:Q5LHG3" FT /protein_id="CAH06417.1" FT /translation="MSKQEVILCEDLESSLKRAIDNCPHDRLFILTDDHTHRLCLSQLA FT GLSILKDAVEITIGAEDVHKTLETLASVWQVLSEKGATRHSLLINLGGGMVTDLGGFAA FT ATFKRGIAYINIPTTLLAMVDASVGGKTGINFNGLKNEIGAFAPAASVLIETEFLRTLD FT AHNFFSGYAEMLKHGLISNTSHWAELLAFDTEKMDYGYLKKLVGHSVQVKEDIVEQDPF FT EHGIRKALNLGHTVGHAFESLALAENRPVLHGYAVAWGIVCELYLSHLKAGFPKEKMRQ FT TIQFIKDNYGAFHFDCKQYDRLYEFMQHDKKNSAGVINFTLLKEIGDISINRTADKDTI FT FEMFDFYRECMGM" FT misc_feature complement(816730..817749) FT /note="Pfam match to entry PF01761 DHQ_synthase, FT 3-dehydroquinate synthase, score 198.1, E-value 1.2e-56" FT CDS 817901..818305 FT /transl_table=11 FT /locus_tag="BF9343_0639" FT /old_locus_tag="BF0673" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3976 SWALL:AAO79081 (EMBL:AE016943) (134 aa) FT fasta scores: E(): 1.4e-38, 69.4% id in 134 aa" FT /db_xref="GOA:Q5LHG2" FT /db_xref="UniProtKB/TrEMBL:Q5LHG2" FT /protein_id="CAH06418.1" FT /translation="MKALLPVFCRPLGYVILVISMFIPFLLLMQGMVTDSNLLFYKECI FT KLLMILGAMMIIFALSRNEGRETEIIRNKATRNAIFLTVLFLFGGMLYRVATGDIMTVD FT TSSFLIFLIINVLCLEFGMQKARIDKIFKR" FT misc_feature order(817934..818002,818012..818080,818135..818188, FT 818198..818266) FT /note="4 probable transmembrane helices predicted for FT BF0673 by TMHMM2.0 at aa 12-34, 38-60, 79-96 and 100-122" FT CDS 818378..821290 FT /transl_table=11 FT /locus_tag="BF9343_0640" FT /old_locus_tag="BF0674" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3977 SWALL:AAO79082 (EMBL:AE016943) FT (937 aa) fasta scores: E(): 5.4e-80, 45.38% id in 985 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT0289 SWALL:AAO75396 (EMBL:AE016927) (896 aa) FT fasta scores: E(): 1e-53, 39.74% id in 946 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT4568 SWALL:AAO79673 (EMBL:AE016945) (811 aa) fasta FT scores: E(): 1.1e-11, 22.06% id in 852 aa" FT /db_xref="GOA:Q5LHG1" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR014766" FT /db_xref="UniProtKB/TrEMBL:Q5LHG1" FT /protein_id="CAH06419.1" FT /translation="MKKLLIWTVLLLTATLSTYAQNKIVTVSGRVIEAGTKEPVELAAV FT QLLSLPDSAQVAGMTTSTQGYFSLSKQKPGKYLLKVSFIGYVTKIIPVQLTANVPAKKM FT GNIELATDAVMLQEAVVVAEAPQVTVVEDTLMYNSSAYRTPEGAMLEELVKKLPGAEID FT DDGNVKINGKDLKKIMVDGKEFFGGDVKTGLKNLPVDMVDKLKTYDKKSDLARVTGIDD FT GEEETVLDLTVKKGMNQGWFGNADLGAGTKDRYTGRMMLNRFVDKTQFSIIGSANNVND FT QGFSGGGGGPRWRSNNGLNATKMLGANFATQTNKLELGGSVRYNFQDADISSINSSERF FT LQNGNSYSNSNNKNRNKGTNLNADFRMEWKPDTLTNIIFRPNFSYGRTNNASRSESGTF FT NEDPFNLIVNPNDYLNFDNLSDDPLKDIRVNATNSASLSKGKSLSGNATLQVNRKLNNR FT GRNLTFRGVFGYGDNDNDQYTQSETRYYQLLNHLGGDSILYRNQYITTPTRNYNYTAQV FT TYSEPIAKATFLQFSYQFQYKYSKSDKTTFDLLDYPDWAIGGALPSGYESHAVDSLSKN FT AEYRYYNHDASVGLRFIRPKYQLNVGMSFQPQNSTLSYKKGDYMIDTTRTVFNFAPNMD FT LRFRFSKVSQLRFTYRGRSNQPTMENLLPITDNSNPLNIRMGNPGLKPSFAHTMRLFYN FT TYNAEKQRGIMTHFSFTATQNSISNSTRYNEETGGLITRPENINGNWNAFGMFGFNTAL FT KNKKYTINTFTNVNYQNNVAFLYNQDTKNNDRNTSTGLTLGERVTGSYRNDWFEFSLNG FT SINYTAERNKLRPENNQEPYTYSYGASTNITMPWKMTLATNIANQSRRGYRDSSMNRDE FT LIWNAQLAQSLLKGAATVSFEVYDILRQQSNISRSLSADMRSVSEYNGINSYCMVHFIY FT RLNIFGSKAAREKMMNSGRRGFGGPGRGPGGGFGGGHPRF" FT misc_feature 818378..818437 FT /note="Signal peptide predicted for BF0674 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.670 between residues 20 and 21" FT misc_feature 819680..819703 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 821453..822892 FT /transl_table=11 FT /gene="cls" FT /locus_tag="BF9343_0641" FT /old_locus_tag="BF0675" FT /product="putative cardiolipin synthetase" FT /note="Similar to Bacillus firmus cardiolipin synthetase FT Cls SWALL:CLS_BACFI (SWALL:O66043) (503 aa) fasta scores: FT E(): 6e-68, 37.2% id in 473 aa, and to Bacteroides FT thetaiotaomicron putative cardiolipin synthetase BT3978 FT SWALL:AAO79083 (EMBL:AE016943) (479 aa) fasta scores: E(): FT 3.2e-177, 87.26% id in 479 aa, and to Bacteroides FT thetaiotaomicron putative cardiolipin synthetase BT2382 FT SWALL:AAO77489 (EMBL:AE016935) (474 aa) fasta scores: E(): FT 2.4e-76, 39.12% id in 478 aa" FT /db_xref="GOA:Q5LHG0" FT /db_xref="InterPro:IPR001736" FT /db_xref="InterPro:IPR015679" FT /db_xref="UniProtKB/TrEMBL:Q5LHG0" FT /protein_id="CAH06420.1" FT /translation="MIDWNYIASVIATVAFDIIYFGAIIGTIVIVILDNRNPVKTMAWI FT LILMFLPVVGLVFYFFFGRSQRREKIIGKKSYDRLLKKPMAEYLAQNCCETPKEYARLI FT QLFQNTNQAFPFEGNRVDIYTGGYSKLQALLRELQKARLHIHMEYYIFEDDPVGRLVRD FT VLIEKAREGVEVRVIYDDVGCWHVPHRFFEEMRDAGIEVRSFLKVRFPLFTSKVNYRNH FT RKIVVIDGRIGFIGGMNLAERYMRGFSWGIWRDTHILLEGKAVHGLQTAFLLDWYFVDR FT TLITASRYFPKIEAYGNSLVQIVTSEPIGPWKEIMQGLTVAISGAKKYFYMQTPYFLPT FT EQILGAMQTAALAGVDIRLMLPEHADNRVTHLGSCSYLADVLRAGVKVYFYKKGFLHSK FT LMVSDDMLSTVGSTNLDFRSFEHNFEVNAFMYDMETALQMREIFLQDQRESTQIFLKSW FT EKRSSRQKAMESVVRLLAPLL" FT misc_feature order(821480..821548,821582..821641) FT /note="2 probable transmembrane helices predicted for FT BF0675 by TMHMM2.0 at aa 10-32 and 44-63" FT misc_feature 822101..822184 FT /note="Pfam match to entry PF00614 PLDc, Phospholipase D. FT Active site motif, score 46.3, E-value 5.9e-11" FT misc_feature 822626..822709 FT /note="Pfam match to entry PF00614 PLDc, Phospholipase D. FT Active site motif, score 30.3, E-value 3.8e-06" FT CDS complement(822910..823443) FT /transl_table=11 FT /locus_tag="BF9343_0642" FT /old_locus_tag="BF0676" FT /product="putative methyltransferase" FT /note="Similar to Bacteroides thetaiotaomicron putative FT methyltransferase BT3979 SWALL:AAO79084 (EMBL:AE016943) FT (177 aa) fasta scores: E(): 1.3e-62, 90.39% id in 177 aa, FT and to Fusobacterium nucleatum methyltransferase FN1329 FT SWALL:Q8R621 (EMBL:AE010638) (182 aa) fasta scores: E(): FT 8.1e-17, 38.65% id in 163 aa, and to Clostridium tetani FT methyltransferase CTC01232 SWALL:AAO35801 (EMBL:AE015940) FT (185 aa) fasta scores: E(): 3e-14, 34.75% id in 187 aa" FT /db_xref="GOA:Q5LHF9" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR004398" FT /db_xref="UniProtKB/TrEMBL:Q5LHF9" FT /protein_id="CAH06421.1" FT /translation="MRVISGIYKRRRFDVPRTFKARPTTDFAKENLFNVLSNYMDFEEG FT IVALDLFAGTGSISIELVSRGCDRVISVEKDGAHHAFISKIMKEVQTDKCLPIRGDVFK FT FINGSHERFDFIFADPPYELKELETIPDLIFKNNLLKEDGLFVLEHGKKNNFEDHPHFI FT ERRVYGSVNFSFFR" FT misc_feature complement(822913..823443) FT /note="Pfam match to entry PF03602 Cons_hypoth95, Conserved FT hypothetical protein 95, score 122.5, E-value 6.7e-34" FT misc_feature complement(823078..823098) FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT CDS complement(823434..824228) FT /transl_table=11 FT /locus_tag="BF9343_0643" FT /old_locus_tag="BF0677" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3980 SWALL:AAO79085 (EMBL:AE016943) (256 aa) FT fasta scores: E(): 1.9e-78, 75.68% id in 255 aa" FT /db_xref="InterPro:IPR024213" FT /db_xref="UniProtKB/TrEMBL:Q5LHF8" FT /protein_id="CAH06422.1" FT /translation="MPDRAIAETIDFGKSEQYTLSIRLSTDGFSFSIYNPIHDSSLSFF FT EKEVEASLSLTANLKQAFRELDFLNHTYKRVNILMADKRFTLIPLELFEDDQSEMIFYH FT NHTPKENETVKYNILKKNNAVVIFGMDKSTCQFLSDQYPEARFYSQAAPLAEYFSAKSR FT LGNSKKIYASIRRDAIDFFCYERGHLLLANSFECRKTGDRIYYLLYLWKQLNFDQERDE FT LHLTGAFYDKEKLMQELRKYIQQVFIMNPASNIDMQALLTCE" FT CDS complement(824236..824919) FT /transl_table=11 FT /locus_tag="BF9343_0644" FT /old_locus_tag="BF0678" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3981 SWALL:AAO79086 (EMBL:AE016943) (228 aa) FT fasta scores: E(): 2.7e-62, 71.49% id in 228 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHF7" FT /protein_id="CAH06423.1" FT /translation="MKTVFNIVLGVCAIALVYICYASIMGPINFEKAKKHRDKAVVARL FT IDIRKAQAEYRNIYKQYTASFDTLIDFVKTQKIPFVSKEGVLSDKQLEDGMTEKKAMAL FT INKAKKTNNWKEVEAAGLMGFKRDTIWVAVTDTIYDKSFNADSLRYVPFGNGAQFEMYT FT KNDTTKSGAPIFLFQANTPYDVYLNGLDKQEIANLKDLQTKLGKYAGLMVGSIDTPNNG FT AGNWE" FT misc_feature complement(824833..824901) FT /note="1 probable transmembrane helix predicted for BF0678 FT by TMHMM2.0 at aa 7-29" FT CDS 825016..826434 FT /transl_table=11 FT /locus_tag="BF9343_0645" FT /old_locus_tag="BF0679" FT /product="putative ATP-dependent exodeoxyribonuclease" FT /note="Similar to Bacteroides thetaiotaomicron FT ATP-dependent exoDNAse BT3982 SWALL:AAO79087 FT (EMBL:AE016943) (472 aa) fasta scores: E(): 2.3e-165, FT 86.41% id in 471 aa, and to Thermoanaerobacter FT tengcongensis ATP-dependent exoDNAse RecD or TTE0489 FT SWALL:Q8RCE3 (EMBL:AE013020) (765 aa) fasta scores: E(): FT 2.6e-06, 25% id in 376 aa, and to Methanococcus jannaschii FT hypothetical protein Mj1519 SWALL:Q58914 (EMBL:U67593) FT (1175 aa) fasta scores: E(): 3.7e-06, 22.93% id in 484 aa" FT /db_xref="InterPro:IPR010285" FT /db_xref="UniProtKB/TrEMBL:Q5LHF6" FT /protein_id="CAH06424.1" FT /translation="MINNYLERQIKENFSYQPTFEQEIAVKSLSEFLLSTANDTVFVLR FT GYAGTGKTSLVGALVKAMDKLQQKSVLLAPTGRAAKVFSAYAGHPAFTIHKKIYRQQSF FT SNEVSNFSINDNLTTHTLYIVDEASMISNEGLSGSMFGTGRLLDDLVEFVYSGAGCRLL FT LMGDTAQLPPVGEEQSPALATEALKGYGLNVIEVDLTQVVRQVQSSGILWNATQIRQLI FT AEDECFSLPKIKVSGFPDIQVVRGDELIDTLTDCYEKDGMDETIVVCRSNKRANIYNKG FT IRAQILYREDELNTGDLLMVAKNNYFWTEKYKEMDFIANGEIAVVRRVRRTRELYGFRF FT AEVLLAFPDQNDFELEANLLLDTLHSDAPALPKTENDRLFYSVLEDYVDITVKRERMKK FT MKADPHYNALQVKYAYAVTCHKAQGGQWQNVFLDQGYMSDEYLTPDYFRWLYTAFTRAS FT KTLYLVNYPEEQIE" FT misc_feature 825151..825174 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(826530..828263) FT /transl_table=11 FT /locus_tag="BF9343_0646" FT /old_locus_tag="BF0680" FT /product="conserved hypothetical lipoprotein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3984 SWALL:AAO79089 (EMBL:AE016943) (537 aa) FT fasta scores: E(): 1.1e-18, 27.08% id in 587 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT2559 FT SWALL:AAO77666 (EMBL:AE016936) (547 aa) fasta scores: E(): FT 1e-17, 27.5% id in 589 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT1039 SWALL:AAO76146 FT (EMBL:AE016930) (527 aa) fasta scores: E(): 6.4e-12, 28.93% FT id in 584 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHF5" FT /protein_id="CAH06425.1" FT /translation="MKIKIYKSLAMCTLLLGLAACNDFEEMNTDPYAPVYDPEIIGATP FT DGIDIDYELTPSALKSLQGTESAIGSVFANLTYEGLYNDYQVTTNLTHDIYAAYFANNV FT SGFVTNSPTYGYNDGWSKRRWEHFYDNRTVEEYSQLIKTFWFCGKERYHNAFYMTRIYY FT AFLISMQTDTYGAIPLEYYVKGAMPTDEKVKYMDQKDVYDVIFKMLDQAITALHNTPST FT AQYSLGENDKCFGGDKDKWLRFANTLRLRLALRVSNVDPQLAKEQGEKAMADPAGLMQN FT DDDNMKQTPKYSYITGGNENIYTLLYNWSANVVLSKEMERAYKEQSTILDPRCEILWWR FT PTALEDLNQTEPKEDMTKDFNGCENGETSLGGSYTTTYSPSRVFIKQDQKKLDRKHWWC FT YAREIVWLGYSESLFLRAEAALRGWAGAKGTAEDLYKEGIEASFNYYQIGADEEGQEKI FT SKYMEGLKGLQAFKSGDREAQLEQIITQKWIAVYPNGNEGWAEFRRTDYPRYMKTPKGG FT NNSGGEVANGKFIKRLRYPDSEVSNPNRPKDVDTQGTRLWWDVADTNDDGGNYVTPNNF FT R" FT misc_feature complement(828189..828263) FT /note="Signal peptide predicted for BF0680 by SignalP 2.0 FT HMM (Signal peptide probability 0.994) with cleavage site FT probability 0.514 between residues 25 and 26" FT misc_feature complement(828201..828233) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(828286..831702) FT /transl_table=11 FT /locus_tag="BF9343_0647" FT /old_locus_tag="BF0681" FT /product="putative outer membrane protein" FT /note="Similar, but extended at the N-terminus, to FT previously sequenced Bacteroides fragilis fragilis FT regulatory region FrrG SWALL:Q8VTA9 (EMBL:AF329100) (1137 FT aa) fasta scores: E(): 1.5e-46, 27.61% id in 1148 aa, and FT similar, but extended at the N-terminus, to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT0317 SWALL:Q8AAZ5 FT (EMBL:AE016927) (1062 aa) fasta scores: E(): 2.7e-97, FT 34.66% id in 1079 aa, and similar, but extended at the FT N-terminus to Bacteroides thetaiotaomicron putative outer FT membrane protein, probably involved in nutrient binding FT BT3983 SWALL:Q8A0N8 (EMBL:AE016943) (1135 aa) fasta scores: FT E(): 6.6e-72, 31.51% id in 1139 aa" FT /db_xref="GOA:Q5LHF4" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR011662" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LHF4" FT /protein_id="CAH06426.1" FT /translation="MKNKILFQRPRLLKASLVLLLAAAPIQWSFAQFTFSTSRTTLGQV FT IKTVQSQSKYQFFYDDQSSNMPIENLNVKNVSLEQLLNTALKGKNLTYKIEDNIVYLSQ FT ASKQQDPVQASAKRQISGTVVDANGEALIGVNVSVKGTSTGAITDLEGKYTLTVNDPKA FT EIVFSYIGYKQQVLPAKESILNVTMSEDTQMISEVVVTALGIKREKKMLGYAVQEIKGD FT QLNQTGDPSVTSALQGKVAGLQMNTAGTGLGGSTKITIRGNSSLADNNQPLWIVDGVPF FT SDNNNSDATYYGGVDRGGSSVDINPEDIESISVLKGPNAAALYGSRAGNGVILVTTKKG FT SKKDGFGVRYSGNFTWSQVAETLEMQDRYGQGHIVTQDENKNPLSQYYAKYDPTDSSSW FT GPVLDGSMQKAWNGDTYAFSKYGNKLKDYFDTGFAQNHNVSVSNVTDKSHFRASFGSSN FT NKGVFPNEKLNRINLDLNAGMEMNKYLSMDGKISLSRTKAEDRPYFGTYGAIAQLMGIP FT NNIRLDDLKQYSTDGNAHVNWTGPTAGIRNPYYVLNQRHNSDERWRAFGYYGMKINFTD FT WLHLSAKYAFDYYRTRIEETNAGDGINGESSIKDITDDEMNREEQNFFESNAEIVLMGD FT KQLTDNFRLGFTVGGNFMYQNYESLNAGVRNMLDKGQWIFNAANMLNTAGETGHERATN FT SVFGSLQLSWKEYLSLDLTARNDWSSTLPKKNNSFFYPSANLSFVVSDFVRSLDKTLPN FT WLTFAKVRLSAAQVGKDTDPYQLYNTYGFKFEKGELIPSKSNVKMNDQLKPEISSSYEA FT GLDMKFLNNRLGFDFTYYYSRTKNQIMKVPAAAPWSGGKWVNAGLITNKGFEMMIYSTP FT VQLKDFSFDLNVNLAKNVSNVEKLADGVDYIYFNGDSNFPINVGARPGHKLGEIYAKTL FT YKRDEQGNIIINKENGLPMTTTDADERLAKPIGNIQPNLLMSVSPSFTYKGITLSAIFD FT MKFGGDIISISEMNATGSGMAKRTMNRGESDNFMMIFPGVYEDGTPNTQKISASNYYGA FT QNAEDFIYDASFIKLKELAIGYTFPKSMLKKTPINSLNVSFVARNLAYLLKHTPGTSPE FT GGYDTTMFSQAIDFMAVPYTRTFGFSVNLGF" FT misc_feature complement(828289..831075) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 11.5, E-value 9.1e-05" FT misc_feature complement(831574..831702) FT /note="Signal peptide predicted for BF0681 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.616 between residues 43 and 44" FT CDS complement(831948..834203) FT /transl_table=11 FT /locus_tag="BF9343_0648" FT /old_locus_tag="BF0682" FT /product="putative alpha-1,2-mannosidase precursor" FT /note="Similar to Bacillus sp. M-90 alpha-1,2-mannosidase FT precursor Aman2 SWALL:Q9WXI8 (EMBL:AB025248) (1976 aa) FT fasta scores: E(): 4e-34, 31.99% id in 769 aa, and to FT Bacteroides thetaiotaomicron putative alpha-1,2-mannosidase FT BT3990 SWALL:AAO79095 (EMBL:AE016943) (755 aa) fasta FT scores: E(): 0, 85.84% id in 749 aa, and to Bacteroides FT thetaiotaomicron alpha-1,2-mannosidase BT3527 FT SWALL:AAO78633 (EMBL:AE016941) (763 aa) fasta scores: E(): FT 0, 73.93% id in 729 aa" FT /db_xref="GOA:Q5LHF3" FT /db_xref="InterPro:IPR005887" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012939" FT /db_xref="UniProtKB/TrEMBL:Q5LHF3" FT /protein_id="CAH06427.1" FT /translation="MTACLIACSLMAEAKDWTQYVNPLMGTQSSFELSTGNTYPAIARP FT WGMNFWTPQTGKMGDGWQYTYTANKIRGFKQTHQPSPWINDYGQFSIMPVTGKLEFDEE FT KRASWFSHKGEIATPSYYKVYLAEHDVVTEMTPTERAVLFRFTFPENEHSYIVVDAFDK FT GSYVKVIPEENKIIGYTTRNSGGVPENFKNYFVIEFDKPFTYKGTFADKKLEEGNLEQK FT ADHTGAIIGFSTRKGEIVHARIASSFISFEQAAQNLKELGNDSFEQLAQKGNDAWNNVL FT GKIEVEGGNLDQYRTFYSCLYRSLLFPRKFYEFTADGQPVHYSPYNGQVLPGYMYTDTG FT FWDTFRCLFPFLNLMYPSVNKEIQEGLINTYKESGFFPEWASPGHRGCMIGNNSASVLV FT DAYMKGVKVDDVKTLYEGLIHGTENVHTEVSSTGRLGYQYYNKLGYVPYDVKINENTAR FT TLEYAYDDWCIYQLAKALNRPKKEIELFAKRAMNYRNVFDKESKLMRGRNENGQFQSPF FT SPLKWGDAFTEGNSWHYSWSVFHDPQGLIDLMGGKKMFITMLDSVFAVPPVFDDSYYGQ FT VIHEIREMTVMNMGNYAHGNQPIQHMIYLYNYAGQPWKAQYWLRQVMDRMYTPGPDGYC FT GDEDNGQTSAWYVFSALGFYPVCPGTDEYVIGAPLFKKATLHFENGNNLVIDAQNNSKE FT NLYIESLRVNGQESTRNYLKHADLLQGGTIEFKMGSHPNLNRGINDDDAPYSFSKMK" FT CDS complement(834321..836588) FT /transl_table=11 FT /locus_tag="BF9343_0649" FT /old_locus_tag="BF0683" FT /product="putative alpha-1,2-mannosidase precursor" FT /note="Similar to Bacillus sp. M-90 alpha-1,2-mannosidase FT precursor Aman2 SWALL:Q9WXI8 (EMBL:AB025248) (1976 aa) FT fasta scores: E(): 2.4e-25, 24.93% id in 762 aa, and to FT Bacteroides thetaiotaomicron putative alpha-1,2-mannosidase FT BT3991 SWALL:AAO79096 (EMBL:AE016943) (758 aa) fasta FT scores: E(): 0, 83.68% id in 754 aa, and to Xanthomonas FT campestris hypothetical protein XCC2894 SWALL:Q8P6S1 FT (EMBL:AE012403) (781 aa) fasta scores: E(): 6e-108, 41.28% FT id in 734 aa" FT /db_xref="GOA:Q5LHF2" FT /db_xref="InterPro:IPR005887" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012939" FT /db_xref="UniProtKB/TrEMBL:Q5LHF2" FT /protein_id="CAH06428.1" FT /translation="MKFKTFLAGCLGGLLSLNSCTNSPDMTDYAAYVNPFIGTGGHGHT FT FPGAIVPHGMISPSPDTRIDGWDACSGYYYADSTINGFSHTHLSGTGCCDYGDVLLMPT FT VGEQKYLPTGSQSQQMAYASAFSHQNETAEPGYYSVFLDTYQVKAELTASKRAAIHRYT FT FPESKEAGFILDLDYSLQRQTNKEMEIEVISPTEICGRKKTMYWAFDQYINFYAKFSKP FT FTYTLVTDSMALDDGGRLLPTCKALLHFDTTKDEQVFVKVGISAVDIEGARKNVETEIP FT DWDFDGVRKDARKAWNETLSKIDITTNDKNDKTIFYTALYHTAISPNLFTDVDGRYLGM FT DLQVHQGDTLNPMYTIFSLWDTFRALHPLMTIIDPDLNNAFIRSLIKKHQEGGIFPMWD FT MASNYTGTMIGYHAVPVIVDAYMKGDRNFDIQEAYRACVRAAEYDTTGIKCPDLVLPHL FT MPKAKYYKNSIGYVPCDRENESVAKALEYAYDDWCISVFADALNDYDTRDKYARFAKAY FT EFYFDPETRFMRGLDSKGEWRTPFNPRSSTHRNDDYCEGTAWQWTWFVPHDIEGLVKLM FT GGEDAFVGKLDSLFTADSSLEGETTSSDISGLIGQYAHGNEPSHHVIHMYNYVNRPWRT FT QELVDSVYRSQYANAVDGLSGNEDCGQMSAWYVLNSMGFYQVCPGKPVYSIGRPAFDKA FT VVNLPDGKKFTVIAKNNSKKNKYIKSMTLNGKPLDKPFFTHDDIIAGSTLEIEMTDRRT FT QP" FT misc_feature complement(836526..836588) FT /note="Signal peptide predicted for BF0683 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.591 between residues 21 and 22" FT CDS complement(836618..837616) FT /transl_table=11 FT /locus_tag="BF9343_0650" FT /old_locus_tag="BF0684" FT /product="putative anti-sigma factor" FT /note="Similar to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrF SWALL:Q8VTB0 FT (EMBL:AF329100) (336 aa) fasta scores: E(): 3.6e-21, 28.48% FT id in 337 aa, and to Bacteroides thetaiotaomicron putative FT anti-sigma factor BT3992 SWALL:AAO79097 (EMBL:AE016943) FT (309 aa) fasta scores: E(): 1.6e-84, 69.8% id in 308 aa, FT and to Bacteroides thetaiotaomicron putative anti-sigma FT factor BT0965 SWALL:AAO76072 (EMBL:AE016929) (324 aa) fasta FT scores: E(): 3.8e-26, 31.61% id in 329 aa" FT /db_xref="InterPro:IPR006860" FT /db_xref="InterPro:IPR012373" FT /db_xref="UniProtKB/TrEMBL:Q5LHF1" FT /protein_id="CAH06429.1" FT /translation="MNNLSEDILMRYLTGECSDEDFARVNAWIKESDDNARRLFRMEEV FT YHLGRHDSFPDQKKVARAEARLYKKLAQEDAHSRKVIRMHQWMRYAAIIVLALMIGTGG FT GYLYYQADPTRNMITASSTDGKVKEVMLPDGTKVWLNQSATLRYPKEFSESERDVYLDG FT EAYFEVTKNRRCPFVVESEAMRIKVLGTTFNFKCDKSHKLAEATLIEGEIEVRGNHDEG FT MIILSPGQKAELNKTTRRLVVKQVDAKLDAVWHNDLIPFEQADIFAITRTLERFYDVKI FT ILSPDIKSDKTYSGVLKKKDNIESVLQSLDNSIPINYKIVGDNIFISSRNK" FT misc_feature complement(837290..837358) FT /note="1 probable transmembrane helix predicted for BF0684 FT by TMHMM2.0 at aa 87-109" FT CDS complement(837669..838223) FT /transl_table=11 FT /locus_tag="BF9343_0651" FT /old_locus_tag="BF0685" FT /product="putative RNA polymerase ECF-type sigma factor" FT /note="Similar to Bacteroides fragilis fragilis regulatory FT region sigma factor RpoE SWALL:Q8VTB1 (EMBL:AF329100) (187 FT aa) fasta scores: E(): 5.5e-09, 30.46% id in 174 aa, and to FT Bacteroides thetaiotaomicron RNA polymerase ECF-type sigma FT factor BT3993 SWALL:AAO79098 (EMBL:AE016943) (184 aa) fasta FT scores: E(): 2.8e-60, 84.69% id in 183 aa, and to FT Bacteroides thetaiotaomicron RNA polymerase ECF-type sigma FT factor BT3277 SWALL:AAO78383 (EMBL:AE016939) (189 aa) fasta FT scores: E(): 5.8e-15, 33.52% id in 176 aa" FT /db_xref="GOA:Q5LHF0" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="InterPro:IPR014327" FT /db_xref="UniProtKB/TrEMBL:Q5LHF0" FT /protein_id="CAH06430.1" FT /translation="MDDTFDITYKALFRRYYPNLMFYATRLVGDEEAEDVVQDVFVELW FT KRRDSMVIGDQIQAFLYRAVYTRALNVLKHRSIENGYCAAVEEINQKRAEFYQPDNNEV FT IRRIEDRELRNEIYQAINELPDKCKEVFKLSYLHEMKNKEIADVMGVSLRTVEAHMYKA FT LKFLRNRLGHLWFLFLLFFIK" FT misc_feature complement(837717..837866) FT /note="Pfam match to entry PF04545 sigma70_r4, Sigma-70, FT region 4, score 56.7, E-value 4.3e-14" FT misc_feature complement(837741..837806) FT /note="Predicted helix-turn-helix motif with score FT 1109.000, SD 2.96 at aa 140-161, sequence FT MKNKEIADVMGVSLRTVEAHMY" FT misc_feature complement(837990..838190) FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 37.9, E-value 2e-08" FT CDS complement(838262..840478) FT /transl_table=11 FT /locus_tag="BF9343_0652" FT /old_locus_tag="BF0686" FT /product="putative alpha-1,2-mannosidase precursor" FT /note="Similar to Bacillus sp. M-90 alpha-1,2-mannosidase FT precursor Aman2 SWALL:Q9WXI8 (EMBL:AB025248) (1976 aa) FT fasta scores: E(): 8.5e-28, 27.05% id in 754 aa, and to FT Bacteroides thetaiotaomicron putative alpha-1,2-mannosidase FT BT3994 SWALL:AAO79099 (EMBL:AE016943) (743 aa) fasta FT scores: E(): 0, 83.67% id in 723 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT3130 FT SWALL:AAO78236 (EMBL:AE016939) (735 aa) fasta scores: E(): FT 1.6e-122, 44.65% id in 748 aa" FT /db_xref="GOA:Q5LHE9" FT /db_xref="InterPro:IPR005887" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR012939" FT /db_xref="UniProtKB/TrEMBL:Q5LHE9" FT /protein_id="CAH06431.1" FT /translation="MKVLFHSLFILLFVFTACTSTPKQATIDYTQYVNPFIGTDFTGNT FT YPGAQVPFGMVQLSPDNGLPGWDRISGYFYPDSTIAGFSHTHLSGTGAGDLYDISFMPV FT TLPYKEAEAPLGIYSKFSHQDENATAGYYQVLLKDYGINVELTATERCGIQRYTFPEAK FT AAIFLNLKKAMNWDFTNDSHIEVIDSVTIQGYRFSDGWARDQHVYFRTRFSKPFTAVQM FT DTTAILKDGKRMGTATIARFDFDTQKGEQILVNTALSGVSMEGAAQNLAAEVPEDNFDK FT YREAARDNWNRQLSKIAVKGDHKDDWVNFYTALYHTMLAPTIYSDVDGSYYGPDKKIHR FT TDGWVNYSTFSLWDTYRAAHPLFTYTEPERTNDMVQSFLAFYEQNGRLPVWNFYGSETD FT MMIGYHAVPVIVDAYLKGIGNFDPKKALEACVATANLDNYRGIGAYKELGYVPFNEKDS FT YNAENWSLSKTLEYAYDDYCIARMAEKLGKKEIADEFYKRSQNYRNVYNPATSFMQPRD FT DKGEFQKDFKADAYTPHICESNGWQYFWSVQHDIDGLIGLTGGKERFAQKLDSMFTFHP FT SADDELPLFSTGMIGQYAHGNEPSHHVIYLYNAVDQPWKTQEYVAKVMNELYLNSPAGL FT CGNEDCGQMSAWYVFSAMGFYPVNPISGQYEIGTPLFPEVQLHLDNGKTFTVKAPAVSK FT ENIYIRSTKLNGKPYDKSYITHEQIMSGATLEFEMGKEKVTSDQ" FT misc_feature complement(840404..840478) FT /note="Signal peptide predicted for BF0686 by SignalP 2.0 FT HMM (Signal peptide probability 0.980) with cleavage site FT probability 0.765 between residues 25 and 26" FT misc_feature complement(840425..840457) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(840978..842171) FT /transl_table=11 FT /locus_tag="BF9343_0653" FT /old_locus_tag="BF0687" FT /product="putative efflux transporter bicyclomycin FT resistance protein" FT /note="Similar to Bacillus subtilis bicyclomycin resistance FT protein YdgK SWALL:P96709 (EMBL:AB001488) (402 aa) fasta FT scores: E(): 9.9e-42, 36.22% id in 392 aa, and to FT Oceanobacillus iheyensis bicyclomycin resistance protein FT ob0017 SWALL:Q8EU72 (EMBL:AP004593) (412 aa) fasta scores: FT E(): 1.2e-44, 37.73% id in 371 aa" FT /db_xref="GOA:Q5LHE8" FT /db_xref="InterPro:IPR004812" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:Q5LHE8" FT /protein_id="CAH06432.1" FT /translation="MTDRQNSRRFLLLFLGVLSAFGPFIMDMYLPTLPAMADFFHTSSS FT MVQLGLTTSMIGLAAGQLIFGPLSDKYGRRPPLLLAMILFLLATVGCIFSHTISQFVTS FT RFLQGIAGAGGVVISRSIATDEYSGQQLAGMLAVIGGINGIATVIAPIGGGILAQITSW FT QGIFICLFFMGVVLLSGSLHLNESLPAKHRQTVSWQDLYHSFGEVLHNRRYVGYVLQYG FT FTMGILFVNISSAPFIMQQHYGLSPLSFSLCFGINAIAMVISSAISIKLPTMERALYIG FT SRGMLSVSALLMVFLSLRCDFWIYELLIFALLSMIGMTFTASNTLAMECERRNAGIASA FT LLGATGFAFGGIVSPLVSLGDMMTSTGILFLAGSACAYACTRYVLSQSVQPSGVLYH" FT misc_feature complement(840984..842129) FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -100.1, E-value 0.00013" FT misc_feature complement(order(841014..841082,841095..841163, FT 841200..841268,841278..841346,841365..841433, FT 841461..841529,841617..841685,841698..841766, FT 841803..841871,841881..841949,841968..842036, FT 842079..842147)) FT /note="12 probable transmembrane helices predicted for FT BF0687 by TMHMM2.0 at aa 9-31, 46-68, 75-97, 101-123, FT 136-158, 163-185, 215-237, 247-269, 276-298, 302-324, FT 337-359 and 364-386" FT misc_feature complement(842061..842171) FT /note="Signal peptide predicted for BF0687 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.597 between residues 37 and 38" FT CDS 842321..843175 FT /transl_table=11 FT /locus_tag="BF9343_0654" FT /old_locus_tag="BF0688" FT /product="putative AraC-family transcriptional regulator" FT /note="Similar to Pseudomonas sp PobR regulator FT SWALL:Q9X7I7 (EMBL:Y18527) (293 aa) fasta scores: E(): FT 8.6e-06, 28.02% id in 157 aa, and to Bacteroides FT thetaiotaomicron transcriptional regulator BT1968 FT SWALL:Q8A6B6 (EMBL:AE016934) (282 aa) fasta scores: E(): FT 3e-22, 29.69% id in 266 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT3974 FT SWALL:Q8A0P7 (EMBL:AE016943) (264 aa) fasta scores: E(): FT 1.8e-16, 28.89% id in 263 aa" FT /db_xref="GOA:Q5LHE7" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="UniProtKB/TrEMBL:Q5LHE7" FT /protein_id="CAH06433.1" FT /translation="MKTDRLLADTKTIRYEETDLASLISAPYHFRCGIYLICTQGEAVV FT STGVQKYIFNEQTELIFLTGGLLQVLETSGDLQVKMLMFPKEAFLNAMLPIDTPYFNYT FT HEHPCYHHTADERSQKTWRQINLWMDMAQMLFTEPMPQFRGQQEHNFLQSLLMWLFNTI FT PEKLAVSKQYSRTQLLCHRFMQLIREYSMHEHQVAFYAEKLCISSRYLHKITVRHLDGK FT KPKQLIDEQLVAEIKVLLNEPRLSVTEIAEQLHFPDQSYLTHFFKKNTGISPKEFRAIK FT NLG" FT misc_feature 843026..843157 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 46.1, E-value 6.5e-11" FT CDS complement(843422..846040) FT /transl_table=11 FT /gene="alaS" FT /gene_synonym="lovB" FT /locus_tag="BF9343_0655" FT /old_locus_tag="BF0689" FT /product="putative alanyl-tRNA synthetase" FT /EC_number="6.1.1.7" FT /note="Similar to Escherichia coli alanyl-tRNA synthetase FT AlaS or LovB or B2697 SWALL:SYA_ECOLI (SWALL:P00957) (876 FT aa) fasta scores: E(): 3.2e-124, 43.67% id in 886 aa, and FT to Bacteroides thetaiotaomicron alanyl-tRNA synthetase FT BT3995 SWALL:Q8A0M6 (EMBL:AE016943) (872 aa) fasta scores: FT E(): 0, 93.11% id in 872 aa, and to Porphyromonas FT gingivalis W83 alanyl-tRNA synthetase AlaS or PG1246 FT SWALL:AAQ66329 (EMBL:AE017176) (876 aa) fasta scores: E(): FT 0, 68.57% id in 872 aa" FT /db_xref="GOA:Q5LHE6" FT /db_xref="InterPro:IPR002318" FT /db_xref="InterPro:IPR003156" FT /db_xref="InterPro:IPR012947" FT /db_xref="InterPro:IPR018162" FT /db_xref="InterPro:IPR018163" FT /db_xref="InterPro:IPR018164" FT /db_xref="InterPro:IPR018165" FT /db_xref="InterPro:IPR023033" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHE6" FT /protein_id="CAH06434.1" FT /translation="MLTAKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQ FT FKDIILGNHPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKK FT EAISWAWEYLVDVLKLNPEHLYATVFEGSPEEGLERDNEAASYWEQYLPKDHIINGNKH FT DNFWEMGDTGPCGPCSEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKA FT DSTLEPLPAKVIDTGMGFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGTEYGKNEQND FT IAMRVIADHIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLP FT VLIDSMGDAYPELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTKANGKTEISG FT KDAFTLYDTFGFPLDLTELILRENGMTVNVEEFDAEMQQQKQRARNAAAIETGDWIILK FT EGTTEFVGYDYTEYETSILRYRQVKQKNQTLYQIVLDYTPFYAESGGQVGDTGVLVNEF FT ETIEVIDTKKENNLPIHITKKLPEHPEAPMMACVDTDKRAACAANHSATHLLDEALREV FT LGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHRNIPIEE FT AKELGAIALFGEKYGDHVRVIQFGSSIEFCGGTHVAATGNIGMVKIISESSVAAGVRRI FT EAYTGARVEEMLDTIQDTLSDLKALFNNTPDLGVAIRKYIDENAGLKKQVEDFMKEKEA FT AVKERLLKNVQEINGIKVIKFCLPMPAEVVKNIAFQLRGEITENLFFVAGTVDANKPML FT TVMISDNLVAGGLKAGNLVKEAAKLIQGGGGGQPHFATAGGKNPDGLNAAVEKVLELAG FT I" FT misc_feature complement(843437..843652) FT /note="Pfam match to entry PF02272 DHHA1, DHHA1 domain, FT score 44.2, E-value 2.4e-10" FT misc_feature complement(843929..846025) FT /note="Pfam match to entry PF01411 tRNA-synt_2c, tRNA FT synthetases class II (A), score 1193.3, E-value 0" FT CDS 846144..847112 FT /transl_table=11 FT /locus_tag="BF9343_0656" FT /old_locus_tag="BF0690" FT /product="putative transmembrane peptidase" FT /note="Similar to Shewanella violacea putative peptidase FT YebA SWALL:Q9F1M5 (EMBL:AB052554) (299 aa) fasta scores: FT E(): 3.7e-16, 47.24% id in 127 aa, and to Bacteroides FT thetaiotaomicron putative peptidase BT3996 SWALL:Q8A0M5 FT (EMBL:AE016943) (322 aa) fasta scores: E(): 1.2e-112, FT 90.99% id in 322 aa, and to Thermoanaerobacter FT tengcongensis membrane proteins related to FT metalloendopeptidases NlpD2 or TTE0841 SWALL:Q8RBH7 FT (EMBL:AE013050) (301 aa) fasta scores: E(): 8.6e-18, 30.29% FT id in 241 aa" FT /db_xref="GOA:Q5LHE5" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR016047" FT /db_xref="UniProtKB/TrEMBL:Q5LHE5" FT /protein_id="CAH06435.1" FT /translation="MRKVYYIYNPQTQTYDRIYPTVRQRALSILRRLFIGMGLGAGSFI FT ILLLIFGSPSEKELRKENSQLLAQYNVLSRRLDEAMGVLQDIQQRDDNLYRVIFMADPV FT SPAIRQAGYGGTNRYEQLMDMANSKLVINTTQKMDVLSKQLYIQSKSFDDVVAMCKNHD FT QMLKCIPAIQPISNKDLRKTASGYGTRIDPIYGTTKFHAGMDFSAHPGTDVYATGDGTV FT VKMGWETGYGNTVEIDHGFGYRTRYAHLQEFRTKLGKKVVRGEVIAGVGSTGKSTGPHL FT HYEVHVKGQVVNPVNYYFMDLSAEDYERMIQIAANHGKVFD" FT misc_feature 846228..846296 FT /note="1 probable transmembrane helix predicted for BF0690 FT by TMHMM2.0 at aa 29-51" FT misc_feature 846786..847034 FT /note="Pfam match to entry PF01551 Peptidase_M37, Peptidase FT family M23/M37, score 144.5, E-value 1.6e-40" FT misc_feature 846948..846971 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 847127..847492 FT /transl_table=11 FT /locus_tag="BF9343_0657" FT /old_locus_tag="BF0691" FT /product="putative transcriptional regulator protein" FT /note="Similar to Bacteroides thetaiotaomicron FT transcriptional regulator BT3997 SWALL:Q8A0M4 FT (EMBL:AE016943) (113 aa) fasta scores: E(): 2.1e-29, 72.32% FT id in 112 aa, and to Porphyromonas gingivalis W83 FT transcriptional regulator, putative PG1052 SWALL:AAQ66168 FT (EMBL:AE017175) (118 aa) fasta scores: E(): 1.3e-19, 54.2% FT id in 107 aa, and to Xylella fastidiosa transcription FT regulator protein PD1909 SWALL:Q87AB8 (EMBL:AE012560) (120 FT aa) fasta scores: E(): 7.5e-08, 41.23% id in 97 aa" FT /db_xref="GOA:Q5LHE4" FT /db_xref="InterPro:IPR000551" FT /db_xref="InterPro:IPR009061" FT /db_xref="UniProtKB/TrEMBL:Q5LHE4" FT /protein_id="CAH06436.1" FT /translation="MQNTERDLKLYYSISEVAQMFDVNESLLRFWEKEFPQISPKKGSR FT GVRQYRKEDVETIRLIYHLVKERGMTLPGARQKLKDNREATIRNFEIIDRLKQIRQELI FT GMRDALDGFSTRREEEQ" FT misc_feature 847160..847225 FT /note="Predicted helix-turn-helix motif with score FT 1770.000, SD 5.22 at aa 12-33, sequence FT YSISEVAQMFDVNESLLRFWEK" FT CDS complement(847547..849790) FT /transl_table=11 FT /locus_tag="BF9343_0658" FT /old_locus_tag="BF0692" FT /product="putative RelA/SpoT GTP pyrophosphokinase" FT /EC_number="2.7.6.5" FT /note="Similar to Bacillus subtilis GTP pyrophosphokinase FT RelA or BSU27600 SWALL:RELA_BACSU (SWALL:O54408) (734 aa) FT fasta scores: E(): 8.8e-87, 36.04% id in 763 aa, and to FT Bacteroides thetaiotaomicron GTP pyrophosphokinase BT3998 FT SWALL:Q8A0M3 (EMBL:AE016943) (747 aa) fasta scores: E(): 0, FT 91.42% id in 746 aa, and to Porphyromonas gingivalis W83 FT guanosine-3',5'-bis SpoT or PG1808 SWALL:AAQ66806 FT (EMBL:AE017178) (762 aa) fasta scores: E(): 4.8e-162, FT 55.31% id in 752 aa" FT /db_xref="GOA:Q5LHE3" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR004095" FT /db_xref="InterPro:IPR004811" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR007685" FT /db_xref="InterPro:IPR012675" FT /db_xref="InterPro:IPR012676" FT /db_xref="UniProtKB/TrEMBL:Q5LHE3" FT /protein_id="CAH06437.1" FT /translation="MDTENQKEIAEEQMIEQAFQELLNDYLATKHRKRIEIITKAFNFA FT NQAHKGIKRRSGEPYIMHPIAVAKIVCNEIGLGSTSICAALLHDVVEDTDYTVEDIENI FT FGAKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILIKIADRLHNMRTL FT GSMLPNKQYKIAGETLYIYAPLANRLGLYKIKTELENLSFKYEHPEEYQEIEEKLNATA FT AERDMVFNEFTAPIREQLDKMGLKYRILARVKSIYSIWNKMQTKHVPFEEIYDLLAVRI FT IFEPRNIDEELNDCFDIYVSISKIYKPHPDRLRDWVSHPKANGYQALHVTLMGNNGQWI FT EVQIRSERMNDVAEQGFAAHWKYKEGGGSEDEGELEKWLRTIKEILDDPQPDAIDFLDT FT IKLNLFASEIFVFTPKGELKTMPQNSTALDFAFSLHTDIGSHCIGAKVNHKLVPLSHKL FT QSGDQVEILTSKSQRVQPQWEVFATTARARAKIAAILRKERKTFQKEGEELLNEFFKKE FT EIRPEAAVIEKLCKLHNMKNEEEFLVAIGNKTIVLGDADKNELKEKQSSNWMKYLTFSF FT GNNKDKQQEEKEPQEKEKINTKQILKLTEDALQKKYIMAECCHPIPGDDVLGYMDENDR FT IIIHKRQCPVAAKLKSSYGNRIIATEWDTHKKLSFLVYIYIKGIDNVGLLNEITQVISR FT QLNVNIRKLDMETDDGIFEGKVQLYVHDVEDVKAICNNLRKIPNIKSVTRVEN" FT misc_feature complement(847556..847777) FT /note="Pfam match to entry PF01842 ACT, ACT domain, score FT 31.5, E-value 1.7e-06" FT misc_feature complement(847904..847948) FT /note="PS00090 Nitrogenases component 1 alpha and beta FT subunits signature 2." FT misc_feature complement(848387..848578) FT /note="Pfam match to entry PF02824 TGS, TGS domain, score FT 103.6, E-value 3.2e-28" FT misc_feature complement(848684..849040) FT /note="Pfam match to entry PF04607 RelA_SpoT, Region found FT in RelA / SpoT proteins, score 169.9, E-value 3.5e-48" FT misc_feature complement(849311..849613) FT /note="Pfam match to entry PF01966 HD, HD domain, score FT 49.9, E-value 5e-12" FT CDS complement(849859..851178) FT /transl_table=11 FT /locus_tag="BF9343_0659" FT /old_locus_tag="BF0693" FT /product="putative lytic murein transglycosylase" FT /note="Similar to Photorhabdus luminescens membrane-bound FT lytic murein transglycosylase MltD SWALL:Q8GF74 FT (EMBL:AF346500) (454 aa) fasta scores: E(): 1.7e-21, 30.23% FT id in 377 aa, and to Bacteroides thetaiotaomicron FT membrane-bound lytic murein transglycosylase D presursor FT BT3999 SWALL:Q8A0M2 (EMBL:AE016943) (431 aa) fasta scores: FT E(): 5.6e-149, 81.94% id in 432 aa, and to Chlorobium FT tepidum membrane-bound lytic murein transglycosylase, FT putative CT0979 SWALL:Q8KDR6 (EMBL:AE012862) (536 aa) fasta FT scores: E(): 5.5e-59, 44.62% id in 363 aa" FT /db_xref="GOA:Q5LHE2" FT /db_xref="InterPro:IPR000189" FT /db_xref="InterPro:IPR002482" FT /db_xref="InterPro:IPR008258" FT /db_xref="InterPro:IPR018392" FT /db_xref="InterPro:IPR023346" FT /db_xref="UniProtKB/TrEMBL:Q5LHE2" FT /protein_id="CAH06438.1" FT /translation="MKIEQIRMKKLANYCPLILLFLFATPKVNAQSVDVVIRDNGKERQ FT ESIELPKSMTYPLDSLLNDWKAKNYIDLGKDCSTAEINPLFSDSVYIDRLSRMPTVMEM FT PYNEIVRKFIDMYAGRLRNQVSFMLSACNFYMPIFEEALDAYNLPLELKYLPIIESALN FT PSAVSRAGAGGLWQFMIGTGKMYGLESNSLVDDRRDPIKATWAAARYLKDLYDIYHDWN FT LVIAAYNCGPGTINKAIRRSGGETDYWSIYNYLPKETRGYVPAFIAANYVMTYYCDHNI FT CPMETNIPESTDTIQVNKNLHFQQIADLCNVPMDQIRSLNPQYKKEIIPGESKSYTLRL FT PQNAVSSFIDRQDTIYAHRAGELFKNRRTVAIRDDSSASKRRGSSAKAGSGTPTYYKIK FT NGDTLGAIAAKYGVRVKDLQNWNGLRGTNISAGKRLKIYK" FT misc_feature complement(849865..849993) FT /note="Pfam match to entry PF01476 LysM, LysM domain, score FT 62.4, E-value 8.5e-16" FT misc_feature complement(850204..850263) FT /note="Pfam match to entry PF01476 LysM, LysM domain, score FT 1.0, E-value 11" FT misc_feature complement(850213..850278) FT /note="Predicted helix-turn-helix motif with score FT 1107.000, SD 2.96 at aa 301-322, sequence FT LHFQQIADLCNVPMDQIRSLNP" FT misc_feature complement(850426..850773) FT /note="Pfam match to entry PF01464 SLT, Transglycosylase FT SLT domain, score 112.1, E-value 9.1e-31" FT misc_feature complement(850630..850716) FT /note="PS00922 Prokaryotic transglycosylases signature." FT misc_feature complement(851089..851178) FT /note="Signal peptide predicted for BF0693 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.990 between residues 30 and 31" FT CDS complement(851182..852048) FT /transl_table=11 FT /locus_tag="BF9343_0660" FT /old_locus_tag="BF0694" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4000 SWALL:Q8A0M1 (EMBL:AE016943) (295 aa) fasta FT scores: E(): 1.8e-72, 67.11% id in 298 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHE1" FT /protein_id="CAH06439.1" FT /translation="MAKKTKTYPLYIALLLCFFQVAGIDVYAQEPVKVSQDSISPVREA FT PKARARRHREPVVSTPATDSVKVEKAVVLPPIDSLENLKPAIVTADSLEEVNRQNLERI FT ETPVMPSVVKADSLPPVMSKKLFVPNPTKATWYAIVFPGGGQIYNRKYWKLPIIYGGFA FT GCAYALSWNGKMYKDYAQAYMDIMDNNPNTNSFQDLLPPNHNYTDTQLKDLLRKRKDTY FT RRYRDLSIFAVIGVYLISIIDAYVDAELSNFDISPDLSMRVEPTIINNNPLQPGSKSVG FT VQCSLRF" FT misc_feature complement(order(851311..851367,851536..851595, FT 851962..852030)) FT /note="3 probable transmembrane helices predicted for FT BF0694 by TMHMM2.0 at aa 7-29, 152-171 and 228-246" FT misc_feature complement(851965..852048) FT /note="Signal peptide predicted for BF0694 by SignalP 2.0 FT HMM (Signal peptide probability 0.928) with cleavage site FT probability 0.513 between residues 28 and 29" FT CDS complement(852049..852939) FT /transl_table=11 FT /gene="parB" FT /locus_tag="BF9343_0661" FT /old_locus_tag="BF0695" FT /product="putative ParB-like chromosome partitioning FT protein" FT /note="Similar to Bacillus subtilis stage 0 sporulation FT protein J Spo0J or BSU40960 SWALL:SP0J_BACSU (SWALL:P26497) FT (282 aa) fasta scores: E(): 9.2e-32, 40.49% id in 284 aa, FT and to Bacteroides thetaiotaomicron putative chromosome FT partitioning protein ParB BT4001 SWALL:Q8A0M0 FT (EMBL:AE016943) (296 aa) fasta scores: E(): 2.8e-93, 90.87% FT id in 296 aa, and to Porphyromonas gingivalis W83 SpoOJ FT protein or PG0141 SWALL:AAQ65382 (EMBL:AE017172) (289 aa) FT fasta scores: E(): 1e-54, 58.27% id in 290 aa" FT /db_xref="GOA:Q5LHE0" FT /db_xref="InterPro:IPR003115" FT /db_xref="InterPro:IPR004437" FT /db_xref="UniProtKB/TrEMBL:Q5LHE0" FT /protein_id="CAH06440.1" FT /translation="MATQRRNALGRGLDALLSMEEVKTEGSSSINEIELSKISVNPNQP FT RREFDETALEELADSIREIGIIQPITLRKVSDDEYQIIAGERRYRASQKAGLDTIPAYI FT RTADDENVMEMALIENIQREDLNSVEIALAYQHLIEQYDLTQERLSERVGKKRTTIANY FT LRLLKLPAPIQMALQNKQIDMGHARALITLGDPKLQVKIFEEILEHGYSVRKVEEIVKS FT LSEGEAVKSGTKKITPKRAKLPEEFNMLKQHLSGFFNTKVQLTCSEKGKGKISIPFSNE FT EELERIMEIFDSLKK" FT misc_feature complement(852445..852510) FT /note="Predicted helix-turn-helix motif with score FT 1599.000, SD 4.63 at aa 144-165, sequence FT LTQERLSERVGKKRTTIANYLR" FT misc_feature complement(852577..852849) FT /note="Pfam match to entry PF02195 ParBc, ParB-like FT nuclease domain, score 124.9, E-value 1.3e-34" FT CDS complement(852948..853715) FT /transl_table=11 FT /gene="parA" FT /locus_tag="BF9343_0662" FT /old_locus_tag="BF0696" FT /product="putative ParA chromosome partitioning protein" FT /note="Similar to Bacillus subtilis sporulation initiation FT inhibitor protein SoJ or BSU40970 SWALL:SOJ_BACSU FT (SWALL:P37522) (253 aa) fasta scores: E(): 1.1e-47, 57.02% FT id in 249 aa, and to Bacteroides thetaiotaomicron ATPase, FT ParA family BT4002 SWALL:Q8A0L9 (EMBL:AE016943) (315 aa) FT fasta scores: E(): 3.7e-84, 96.44% id in 253 aa" FT /db_xref="InterPro:IPR002586" FT /db_xref="UniProtKB/TrEMBL:Q5LHD9" FT /protein_id="CAH06441.1" FT /translation="MGKIIALANQKGGVGKTTTTINLAASLATLEKKVLVVDADPQANA FT SSGLGVDIKQSECTIYECIIDRANVQDAIHDTEIDSLKVISSHINLVGAEIEMLNLKNR FT EKILKEVLTPLKEEYDYILIDCSPSLGLITINALTAADSVIIPVQAEYFALEGISKLLN FT TIKIIKSKLNPALEIEGFLLTMYDSRLRQANQIYDEVKRHFQELVFKTVIQRNVKLSEA FT PSYGLPTILYDAESTGAKNHLALAKELISRNSK" FT misc_feature complement(853131..853466) FT /note="Pfam match to entry PF00991 ParA, ParA family FT ATPase, score 131.2, E-value 1.7e-36" FT CDS 853978..854202 FT /transl_table=11 FT /locus_tag="BF9343_0663" FT /old_locus_tag="BF0697" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHD8" FT /protein_id="CAH06442.1" FT /translation="MKREVAKHPHVLDNNIPMFYLKTSGCCCVKHPDVFIPLFYSYHLW FT KMKRLSLSYLVLLSIQVLFVTFVHFENIK" FT misc_feature 854125..854184 FT /note="1 probable transmembrane helix predicted for BF0697 FT by TMHMM2.0 at aa 50-69" FT CDS 854220..854987 FT /transl_table=11 FT /gene="surE" FT /locus_tag="BF9343_0664" FT /old_locus_tag="BF0698" FT /product="putative stationary-phase survival acid FT phosphatase" FT /EC_number="3.1.3.2" FT /note="Similar to Thermoanaerobacter tengcongensis acid FT phosphatase SurE or TTE1338 SWALL:SURE_THETN (SWALL:Q8RA90) FT (255 aa) fasta scores: E(): 4.7e-28, 34.52% id in 252 aa, FT and to Bacteroides thetaiotaomicron stationary-phase FT survival protein SurE BT4003 SWALL:Q8A0L8 (EMBL:AE016943) FT (259 aa) fasta scores: E(): 4.2e-85, 78.26% id in 253 aa, FT and to Porphyromonas gingivalis W83 stationary-phase FT survival protein SurE or PG2163 SWALL:AAQ67113 FT (EMBL:AE017179) (256 aa) fasta scores: E(): 1.8e-34, 40% id FT in 245 aa" FT /db_xref="GOA:Q5LHD7" FT /db_xref="InterPro:IPR002828" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHD7" FT /protein_id="CAH06443.1" FT /translation="MENKRPLILVSNDDGIMAKGISELIKFLRPLGEIVVMAPDAPRSG FT SGCALTVTQPVHYQLLKKDVGLTVYKCSGTPTDCIKLARNQILDRKPDLVVGGINHGDN FT SATNVHYSGTMGIVIEGCLNGIPSIGFSICDHAPGADFDAAGPYVRRIAAMVLEKGLPP FT LTCLNVNFPNTQEIKGVRICEQAKGHWSGEWQACPRRDDANFYWLTGEFIDHEPENEKN FT DHWALANGYVAITPTVVDMTAYHFMDELKSWEL" FT misc_feature 854235..854801 FT /note="Pfam match to entry PF01975 SurE, Survival protein FT SurE, score 175.6, E-value 6.8e-50" FT CDS 854984..856117 FT /transl_table=11 FT /locus_tag="BF9343_0665" FT /old_locus_tag="BF0699" FT /product="putative lipid-A-disaccharide synthase" FT /EC_number="2.4.1.182" FT /note="Similar to Pseudomonas aeruginosa FT lipid-A-disaccharide synthase LpxB or pa3643 FT SWALL:LPXB_PSEAE (SWALL:Q9HXY8) (378 aa) fasta scores: E(): FT 1.4e-29, 31.16% id in 385 aa, and to Bacteroides FT thetaiotaomicron lipid-A-disaccharide synthase BT4004 FT SWALL:Q8A0L7 (EMBL:AE016943) (378 aa) fasta scores: E(): FT 3e-118, 79.63% id in 378 aa, and to Porphyromonas FT gingivalis W83 lipid A disaccharide synthase LpxB or PG2162 FT SWALL:AAQ67112 (EMBL:AE017179) (383 aa) fasta scores: E(): FT 1.7e-59, 45.52% id in 380 aa" FT /db_xref="GOA:Q5LHD6" FT /db_xref="InterPro:IPR003835" FT /db_xref="UniProtKB/TrEMBL:Q5LHD6" FT /protein_id="CAH06444.1" FT /translation="MKYYLIVGEASGDLHASHLMAALKEEDPEAEFRFFGGDLMAAVGG FT TMVKHYKELAYMGFIPVLLHLTTIFANMKRCKEDIVAWSPDVVILVDYPGFNLDIAKFV FT HAKTKIPVYYYISPKIWAWKEYRIKNIKRDVDELFSILPFEVGFFKGHRYPIHYVGNPT FT VDEVTAFKASHQESFADFIADSELADKPIIALLAGSRKQEIKDNLPDMIRAASAFPGYQ FT LVLAAAPGISPEYYAKFVKGTELAVIFDRTYRLLQQADVALVTSGTATLETALFRVPQV FT VCYHTPVGKLVSFLRRHILKVKFISLVNLIAGREVVRELVADTMTVENMRAELERLLFR FT EDYRRKMLDGYEEMARLLGPAGAPRHAAREMVKLLKK" FT misc_feature 854990..856099 FT /note="Pfam match to entry PF02684 LpxB, FT Lipid-A-disaccharide synthetase, score 224.1, E-value FT 1.8e-64" FT CDS 856205..856948 FT /transl_table=11 FT /locus_tag="BF9343_0666" FT /old_locus_tag="BF0700" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4005 SWALL:Q8A0L6 (EMBL:AE016943) (258 aa) fasta FT scores: E(): 1.1e-40, 50.19% id in 261 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT4719 FT SWALL:Q89YL2 (EMBL:AE016946) (240 aa) fasta scores: E(): FT 5.5e-14, 30.7% id in 241 aa" FT /db_xref="InterPro:IPR024299" FT /db_xref="UniProtKB/TrEMBL:Q5LHD5" FT /protein_id="CAH06445.1" FT /translation="MKKIKLLWMAMLTLMLPALQSCDDNDGYSLGDIAVDWATVRVVGG FT DTYSLNADRWGTLWPAATAIPFYKPIDGQRVITYFNPLYDNYEGYDHAVKVEHNYNVLT FT KQVEDLTAENESEFGNDPVWVNKDMMWIGGGYLNVIFRQNLPVKEKHLVSLVRDMRATA FT AEGEDDGYIHLELRYKTYDDVTARQANGAVSFNLNSLDLTGKKGIKVKLNSVKDGETEV FT VFNLKGQSMPEEAKQVTLSDEVQIK" FT misc_feature 856205..856267 FT /note="Signal peptide predicted for BF0700 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.902 between residues 21 and 22" FT misc_feature 856238..856270 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(857063..857902) FT /transl_table=11 FT /locus_tag="BF9343_0667" FT /old_locus_tag="BF0701" FT /product="putative phosphatidate cytidylyltransferase" FT /EC_number="2.7.7.41" FT /note="Similar to Pseudomonas aeruginosa phosphatidate FT cytidylyltransferase CdsA or Cds or pa3651 SWALL:CDSA_PSEAE FT (SWALL:Q59640) (271 aa) fasta scores: E(): 3e-18, 34.04% id FT in 282 aa, and to Bacteroides thetaiotaomicron FT phosphatidate cytidylyltransferase BT4006 SWALL:Q8A0L5 FT (EMBL:AE016943) (280 aa) fasta scores: E(): 3.8e-92, 78.41% FT id in 278 aa, and to Porphyromonas gingivalis W83 FT phosphatidate cytidylyltransferase CdsA or PG0046 FT SWALL:AAQ65297 (EMBL:AE017172) (284 aa) fasta scores: E(): FT 1.8e-33, 38.84% id in 278 aa" FT /db_xref="GOA:Q5LHD4" FT /db_xref="InterPro:IPR000374" FT /db_xref="UniProtKB/TrEMBL:Q5LHD4" FT /protein_id="CAH06446.1" FT /translation="MKNNFLQRAITGILFVAIIVGCILYDPLAFGTLFVTVSALTIREF FT GHLVNQSGEVSINRTITMLGGAYLFLAIMGFCIDAAGSKIFIPYLILIIYLMVSELYLK FT KKNPVLNWAYSMLSQMYIALPFAMLNVLAFQNDPEASSVSYNPILPLSIFVFLWLNDTG FT AYCFGSLFGKHRLFERISPKKSWEGSIGGGIVAIASSFVFACYFPIMTWAEWAGLALVV FT VIFGTWGDLTESLLKRQLQIKDSGSILPGHGGMLDRFDSSLMAIPAGVIYLYALTLL" FT misc_feature complement(order(857069..857122,857264..857332, FT 857390..857458,857501..857569,857606..857701, FT 857798..857866)) FT /note="6 probable transmembrane helices predicted for FT BF0701 by TMHMM2.0 at aa 13-35, 68-99, 112-134, 149-171, FT 191-213 and 261-278" FT misc_feature complement(857075..857890) FT /note="Pfam match to entry PF01148 CTP_transf_1, FT Cytidylyltransferase family, score 177.2, E-value 2.3e-50" FT misc_feature complement(857123..857203) FT /note="PS01315 Phosphatidate cytidylyltransferase FT signature." FT misc_feature complement(857786..857902) FT /note="Signal peptide predicted for BF0701 by SignalP 2.0 FT HMM (Signal peptide probability 0.629) with cleavage site FT probability 0.327 between residues 39 and 40" FT misc_feature complement(857837..857869) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(857918..859912) FT /transl_table=11 FT /locus_tag="BF9343_0668" FT /old_locus_tag="BF0702" FT /product="putative transmembrane AAA-metalloprotease FtsH" FT /note="Similar to Bacteroides thetaiotaomicron BT4007 FT SWALL:Q8A0L4 (EMBL:AE016943) (696 aa) fasta scores: E(): FT 4.9e-195, 84.06% id in 665 aa, and to Porphyromonas FT gingivalis W83 cell division protein FtsH, putative PG0047 FT SWALL:AAQ65298 (EMBL:AE017172) (673 aa) fasta scores: E(): FT 2.4e-144, 63.47% id in 668 aa" FT /db_xref="GOA:Q5LHD3" FT /db_xref="InterPro:IPR000642" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR003960" FT /db_xref="InterPro:IPR005936" FT /db_xref="InterPro:IPR011546" FT /db_xref="UniProtKB/TrEMBL:Q5LHD3" FT /protein_id="CAH06447.1" FT /translation="MPKFNLNWMYMIIALMLLGLYFANGSSSVSKNISYDEFQQYVRDG FT YVSKVIGYDDNSVEIYIKPQYVGTVFKQDSTRVGRNPMITTEAPSRENLDNFLQKEKEE FT THFDGSVSYDKKKDYFSAILWNVLPIVFLIALWIFFMRRMGSGASGGAGGVFNVGKSKA FT QLFEKGGSIKVTFKDVAGLAEAKQEVEEIVEFLKEPQKYTDLGGKIPKGALLVGPPGTG FT KTLLAKAVAGEANVPFFSLAGSDFVEMFVGVGASRVRDLFKQAKEKAPCIVFIDEIDAV FT GRARGKNPAMGGNDERENTLNQLLTEMDGFGSNSGVIILAATNRVDVLDKALLRAGRFD FT RQIHVDLPDLNERKEVFGVHLRPIKIDDTVDVDLLARQTPGFSGADIANVCNEAALIAA FT RHGKKFVGKQDFLDAVDRIIGGLEKKTKITTEAERRSIALHEAGHASISWLLEYANPLI FT KVTIVPRGRALGAAWYLPEERQITTKEQMLDEMCATLGGRAAEDLFIGRVSSGAANDLE FT RVTKQAYGMIAYLGMSEKLPNLCYYNNDEYSFQRPYSEKTAELIDEEVKRMVNEQYERA FT KQILSEHKEQHNELAQLLIDKEVIFAEDVERIFGKRPWASRSEEIMAANNKQENAVHPA FT DGEDVDTTTPQATESQEGNTQQESAASQN" FT misc_feature complement(858089..858697) FT /note="Pfam match to entry PF01434 Peptidase_M41, Peptidase FT family M41, score 332.6, E-value 3.8e-97" FT misc_feature complement(858713..859279) FT /note="Pfam match to entry PF00004 AAA, ATPase family FT associated with various cellular activities (AAA), score FT 317.4, E-value 1.4e-92" FT misc_feature complement(858908..858964) FT /note="PS00674 AAA-protein family signature." FT misc_feature complement(859241..859264) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(859430..859453) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(order(859490..859558,859826..859894)) FT /note="2 probable transmembrane helices predicted for FT BF0702 by TMHMM2.0 at aa 20-42 and 132-154" FT misc_feature complement(859823..859951) FT /note="Signal peptide predicted for BF0702 by SignalP 2.0 FT HMM (Signal peptide probability 0.994) with cleavage site FT probability 0.357 between residues 43 and 44" FT CDS complement(859961..860320) FT /transl_table=11 FT /locus_tag="BF9343_0669" FT /old_locus_tag="BF0703" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4008 SWALL:Q8A0L3 (EMBL:AE016943) FT (119 aa) fasta scores: E(): 8.5e-40, 84.87% id in 119 aa, FT and to Synechocystis sp. Iojap protein SLR1886 SWALL:P73658 FT (EMBL:D90908) (154 aa) fasta scores: E(): 3.4e-12, 40% id FT in 115 aa" FT /db_xref="InterPro:IPR004394" FT /db_xref="UniProtKB/TrEMBL:Q5LHD2" FT /protein_id="CAH06448.1" FT /translation="MNETKVLIEKITEGIQEKKGKNIVIADLTNIDDTICKYFVICQGN FT SPSQVIAIVDSIKEFTRKGAGTKPSAIDGQRNAEWVAMDFSDVLVHVFLPEARNFYNLE FT HLWADAKLTTIPDID" FT misc_feature complement(859997..860308) FT /note="Pfam match to entry PF02410 DUF143, Domain of FT unknown function DUF143, score 100.4, E-value 3.1e-27" FT tRNA 860622..860695 FT /note="tRNA Gln anticodon CTG, Cove score 47.13" FT CDS complement(860985..862835) FT /transl_table=11 FT /locus_tag="BF9343_0670" FT /old_locus_tag="BF0704" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4041 SWALL:Q8A0I0 (EMBL:AE016943) FT (624 aa) fasta scores: E(): 5e-170, 83.78% id in 623 aa, FT and to Porphyromonas gingivalis W83 hypothetical protein FT PG1189 SWALL:AAQ66285 (EMBL:AE017176) (626 aa) fasta FT scores: E(): 1.2e-78, 43.28% id in 603 aa" FT /db_xref="InterPro:IPR007139" FT /db_xref="UniProtKB/TrEMBL:Q5LHD1" FT /protein_id="CAH06450.1" FT /translation="MMDSHDTNQPLKQGELEEEKKAVEVSEEITETPAEETIVEKPTEN FT ASKLSTKEEVLLRLKEVAQDAENANKQELDGLKQTFYKIHNAEIEAAKKTFVENGGAEE FT EFIAQPSGVEEEFKSLMAAIKEKRSALAAEIEKQKEENLQVKLSIIEELKELVESPDDA FT NKSYNEFKKLQQQWNEVKLVPQAKVNELWKNYQLHVEKFYDILKLNNEFREYDFKKNLE FT IKTHLCEAAEKLADEQDVVSAFHQLQKLHQEFRDTGPVAKELRDEIWNRFKAASTAVNR FT RHQQHFEALKETEQHNLDQKTVICEIVEAIEFDQLKTFAAWETKTQEVIALQNKWKTIG FT FAPQKMNVKIFERFRKACDEFFKKKGEFFKLLKEGMNANLEKKKALCEKAESLKDSTEW FT KETAEILTKLQKEWKTIGPVSKKYSDAVWKRFITACDYFFEQKGKATSSQRSVEQENLE FT KKKAIIARLTAIDETTDADEASKEVRELMKEWNGIGHVPFKEKDRLYKQYHGLIDQLFD FT RFNISASNKKLSNFKSSIGNIQSGGSQSLYREREKLVRTYENMKNELQTYENNLGFLTT FT SSKKGNSLLTEINRKVEKLKSDLELVLQKIKVIDESIKEE" FT misc_feature complement(861564..861794) FT /note="Pfam match to entry PF03993 DUF349, Domain of FT Unknown Function (DUF349), score 31.4, E-value 1.8e-06" FT CDS complement(862954..864294) FT /transl_table=11 FT /locus_tag="BF9343_0671" FT /old_locus_tag="BF0705" FT /product="putative transmembrane Mg2+ transporter" FT /note="Similar to Bacteroides thetaiotaomicron putative FT Mg2+ transporter MgtE BT4042 SWALL:Q8A0H9 (EMBL:AE016943) FT (446 aa) fasta scores: E(): 6.9e-148, 94.84% id in 446 aa, FT and to Porphyromonas gingivalis W83 magnesium transporter FT MgtE or PG0134 SWALL:AAQ65375 (EMBL:AE017172) (450 aa) FT fasta scores: E(): 2.1e-102, 65.39% id in 445 aa" FT /db_xref="GOA:Q5LHD0" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR006667" FT /db_xref="InterPro:IPR006668" FT /db_xref="InterPro:IPR006669" FT /db_xref="UniProtKB/TrEMBL:Q5LHD0" FT /protein_id="CAH06451.1" FT /translation="MNEEYIDNVKELIEEKDADKVKELLIDLHPADIAELCNELNPEEA FT RFVYRLLDNETAADVLVEMDEDVRKEFLDILPSETIAKRFVDYMDTDDAVDLMRELDED FT KQEEILSHIEDIEQAGDIVDLLKYDENTAGGLMGTEMVTVNENWSMPECLKEMRQQAEE FT LDDIYYVYVIDDDERLRGIFPLKKMITSPSVSKVKHVMQKDPISVHVDTPIDEVAQIIE FT KYDLVAIPVLDSIGRLVGQITVDDVMDEVREQSERDYQLASGLSQDVETDDNVLRQTTA FT RLPWLLIGMIGGIGNSMILGNFDSTFAAHPEMALYIPLIGGTGGNVGTQSSALVVQGLA FT NSSLDAKNTFKQVSKEAVVALINATIISLLVYTYNFIRFGATATVTYSVSISLFSVVMF FT ASIFGTLVPMTLEKMKIDPAIATGPFIAITNDIIGMMMYMGITVLLS" FT misc_feature complement(order(862960..863028,863071..863139, FT 863158..863226,863395..863448)) FT /note="4 probable transmembrane helices predicted for FT BF0705 by TMHMM2.0 at aa 283-300, 357-379, 386-408 and FT 423-445" FT misc_feature complement(862969..863349) FT /note="Pfam match to entry PF01769 MgtE, Divalent cation FT transporter, score 104.2, E-value 2.2e-28" FT misc_feature complement(863539..863700) FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 47.6, E-value 2.3e-11" FT misc_feature complement(863716..863892) FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 26.1, E-value 7.1e-05" FT misc_feature complement(863896..864288) FT /note="Pfam match to entry PF03448 MgtE_N, MgtE FT intracellular domain, score 119.6, E-value 4.9e-33" FT CDS complement(864395..865213) FT /transl_table=11 FT /gene="ksgA" FT /locus_tag="BF9343_0672" FT /old_locus_tag="BF0706" FT /product="putative dimethyladenosine transferase" FT /EC_number="2.1.1.-" FT /note="Similar to Mycoplasma capricolum dimethyladenosine FT transferase KsgA SWALL:KSGA_MYCCA (SWALL:P43038) (266 aa) FT fasta scores: E(): 3.1e-26, 36.78% id in 261 aa, and to FT Bacteroides thetaiotaomicron dimethyladenosine transferase FT KsgA or BT4043 SWALL:KSGA_BACTN (SWALL:Q8A0H8) (267 aa) FT fasta scores: E(): 4.3e-96, 93.07% id in 260 aa" FT /db_xref="GOA:Q5LHC9" FT /db_xref="HSSP:1QYR" FT /db_xref="InterPro:IPR001737" FT /db_xref="InterPro:IPR011530" FT /db_xref="InterPro:IPR020596" FT /db_xref="InterPro:IPR020598" FT /db_xref="InterPro:IPR023165" FT /db_xref="UniProtKB/Swiss-Prot:Q5LHC9" FT /protein_id="CAH06452.1" FT /translation="MKLVKPKKFLGQHFLKDLKVAQDIADTVDTFPDLPILEVGPGMGV FT LTQFLVKKERLVKVVEVDYESVAYLREAYPSLEDNIIEDDFLKMNLQRLFDGHPFVLTG FT NYPYNISSQIFFKMLDNKDLIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYRVE FT YLFTVNEQVFNPPPKVKSAVIRMTRNETQELGCDPKLFKQIVKTTFNQRRKTLRNSIKP FT ILGKDCPLTEDALFNKRPEQLSVQEFIHLTNQVEQALKVPIEPVSQIENP" FT misc_feature complement(864455..865180) FT /note="Pfam match to entry PF00398 RrnaAD, Ribosomal RNA FT adenine dimethylase, score 174.6, E-value 1.4e-49" FT misc_feature complement(865025..865108) FT /note="PS01131 Ribosomal RNA adenine dimethylases FT signature." FT CDS 865284..866264 FT /transl_table=11 FT /locus_tag="BF9343_0673" FT /old_locus_tag="BF0707" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT dolichol-p-glucose synthetase BT4044 SWALL:AAO79149 FT (EMBL:AE016943) (328 aa) fasta scores: E(): 3e-111, 82.2% FT id in 326 aa" FT /db_xref="GOA:Q5LHC8" FT /db_xref="InterPro:IPR005242" FT /db_xref="InterPro:IPR022791" FT /db_xref="UniProtKB/TrEMBL:Q5LHC8" FT /protein_id="CAH06453.1" FT /translation="MKKLIKKALKLILPLVLGGFILYWVYRDFDFVKATEVLQHGTNWW FT WMAFSLLFGIFAQVFRGWRWRQTLEPLGAFPRRRDCVDAIFISYAASLVVPRVGEVSRC FT GVLAKYDNVSFAKSLGTVVTERLVDTVTILLITGVTVLLQMPVFVTFLEQTGTKIPSFM FT HLLTSVWFYIILFCTIGVIVLLYYLIRTLSFFEKVKGVVLNVCEGIMSLRNVKNLPLFL FT LYSFLIWLSYFLHFYFTFYCFAFTAHLGLLAALVMFVGGTFAVIVPTPNGAGPWHFAVI FT TMMMLYGVNATDAGIFALIVHGIQTLLVILLGVYGLVTISFLHRK" FT misc_feature order(865302..865361,865404..865463,865671..865739, FT 865782..865850,865935..866003,866016..866084, FT 866103..866171,866184..866252) FT /note="8 probable transmembrane helices predicted for FT BF0707 by TMHMM2.0 at aa 7-26, 41-60, 130-152, 167-189, FT 218-240, 245-267, 274-296 and 301-323" FT CDS 866431..867888 FT /transl_table=11 FT /locus_tag="BF9343_0674" FT /old_locus_tag="BF0708" FT /product="putative aminoacyl-histidine dipeptidase" FT /EC_number="3.4.13.3" FT /note="Similar to Escherichia coli aminoacyl-histidine FT dipeptidase PepD or PepH or B0237 SWALL:PEPD_ECOLI FT (SWALL:P15288) (484 aa) fasta scores: E(): 1.6e-85, 45.45% FT id in 484 aa, and to Bacteroides thetaiotaomicron FT aminoacyl-histidine dipeptidase BT4045 SWALL:AAO79150 FT (EMBL:AE016943) (485 aa) fasta scores: E(): 9.7e-178, FT 91.13% id in 485 aa, and to Chlorobium tepidum FT aminoacyl-histidine dipeptidase PepD or CT1058 SWALL:Q8KDJ2 FT (EMBL:AE012869) (486 aa) fasta scores: E(): 1.8e-93, 50.82% FT id in 488 aa" FT /db_xref="GOA:Q5LHC7" FT /db_xref="InterPro:IPR001160" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:Q5LHC7" FT /protein_id="CAH06455.1" FT /translation="MSTILDLAPQNVWKHFYSLTQIPRPSGHMEKITEFLVNFGNSLGL FT KTFVDDAGNVIIRKPATPGMENRKGVILQAHMDMVPQKNNDTVHDFEKDPIETYIDGEW FT VKAKGTTLGADNGLGVAAIMAVLEDQNLKHGPLEALITKDEETGMYGAFGLKPGTVNGE FT ILLNLDSEDEGELYIGCAGGMDVTASLEYKEVAPEEGDIAIRVNLKGLRGGHSGLEINQ FT GRANANKLLVRFIREAVATYEARLASWEGGNMRNAIPREAHAVVTIPAENEEELLALVK FT YCEDLFNEEFKAIETPISFTAERVELPAGEVPEEIQDNLIDAIFACQNGVMRMIPTIPD FT TVETSSNLAIINIGEGKASFKILARSSSDSMKECLTTSLECCFSMAGMKVEMTGGYSGW FT QPDINSPILHAMKESYKKQFGTEPAVKVIHAGLECGIIGAIIPGLDMISFGPTLRSPHS FT PDERALIPTVQKFYDFLIATLEQTPMK" FT misc_feature 866476..867876 FT /note="Pfam match to entry PF01546 Peptidase_M20, Peptidase FT family M20/M25/M40, score 129.9, E-value 4e-36" FT CDS complement(868542..870224) FT /transl_table=11 FT /locus_tag="BF9343_0675" FT /old_locus_tag="BF0709" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT1247 SWALL:AAO76354 (EMBL:AE016931) (863 aa) FT fasta scores: E(): 1.6e-06, 33.33% id in 168 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT3424 FT SWALL:AAO78530 (EMBL:AE016940) (912 aa) fasta scores: E(): FT 2.2e-06, 23.15% id in 285 aa" FT /db_xref="GOA:Q5LHC6" FT /db_xref="InterPro:IPR002890" FT /db_xref="UniProtKB/TrEMBL:Q5LHC6" FT /protein_id="CAH06456.1" FT /translation="MKRIFTLYLFILFCLILQAQEELYERVYVHTDKTCYLAGEEVWLK FT FYTIDTHFRPSSFSKVGYVEISNTERPKAQLKLALDNGSGSGKVKIPTDAPSGIYELTG FT YTRYMRNEGEKVFFRKSIAVINTFRVSDSDPIELADSAEIYPKGKPATTENIHIKTSRS FT NYNTRQLVELTINRLPDEVSDLTVSVSRNDSLVTLPPLEESTWRKQVTATPGTFSGKWI FT PEYEGHIICGQIESPTGETLKQVQNEPISADIAFVGKDIRYVQGQVESEGNTLFYTSHV FT YGTNDVVAAAWNINGEPFRMNILSPFSEKLPQNLPSLKLYRNKKRLLERSIGIQLQQVT FT VLDSLDHAIPLQSCYGLQPYLNYNLDEYTRFNTMTETFVEFVRSVIIRKVNGKRRLRVL FT KEGEKRFNIGNTLVLLDGVPIHDHEDILKYNPRLVKKIEIYNGRYGFGGEVFECMISLT FT TQRGDLPSIQLSDDSRLTVYECPQLPVTFKMPEYKDATDKKSRRPDFRHTLYWNPSVET FT EAGIDTTLSFYTSDLEGEFKVVVEGFTLKGELIRGEVNFHVKK" FT misc_feature complement(870168..870224) FT /note="Signal peptide predicted for BF0709 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.991 between residues 19 and 20" FT CDS complement(870246..871397) FT /transl_table=11 FT /locus_tag="BF9343_0676" FT /old_locus_tag="BF0710" FT /product="hypothetical exported protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHC5" FT /protein_id="CAH06457.1" FT /translation="MLKSKYKIYLLLLCLTGCVSEYNAQLPSSDEELLVVTGDIIANTE FT AIFSLSKSIPLSEDMPEDYRNIYARIAVVGSDGYRSDFGTALGDGKYQVSIGELQDDVS FT YGIEIEYDGEIYTSSPSTPMVSSEIDSVSWIQPEPEQALSIRVSTHGDPGKTQYYMWNY FT REDWEIRASYITTCYFDPDMNRIYEDSNYPTFYCWKKEISRNILIGSTEKLKEHLIINN FT KLLDVPVNEDRFTVLYSIQVQQRALSKEGYEYYLNVQQQNEEMGGIFTPQPSEIQGNIS FT CISQPKRRTIGYVGVYKNISEKRIYIHPNEIKRPPLYSGCEEVSDSEMDEQGYSTYLIR FT YLAGYRPVGTGTHIDHWALRRCTECEANGGSKNKPSFWPNDHQ" FT misc_feature complement(871329..871397) FT /note="Signal peptide predicted for BF0710 by SignalP 2.0 FT HMM (Signal peptide probability 0.995) with cleavage site FT probability 0.506 between residues 23 and 24" FT CDS complement(871402..874152) FT /transl_table=11 FT /locus_tag="BF9343_0677" FT /old_locus_tag="BF0711" FT /product="putative TonB-dependent outer membrane receptor FT protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2172 SWALL:Q8A5R6 (EMBL:AE016935) (897 aa) fasta FT scores: E(): 2.4e-65, 30.64% id in 842 aa, and to FT Bacteroides thetaiotaomicron putative ferric aerobactin FT receptor BT0150 SWALL:Q8ABG0 (EMBL:AE016926) (792 aa) fasta FT scores: E(): 2.4e-09, 23.93% id in 777 aa" FT /db_xref="GOA:Q5LHC4" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="UniProtKB/TrEMBL:Q5LHC4" FT /protein_id="CAH06458.1" FT /translation="MKKSTYLWMLPLLFAWPQQMTAQHPLSLPADSITIDSLLETVEKN FT TPYRFFSTISAPFKVLVKGKASPLQQLKEALEPTPYKLSVSGNNLFVLKEQELITLLPA FT KLTGEPEKGESYYGDVYTYLSGEPEKASSENKVYNVGDVRIKQPPRKAVLKGQVTNFKT FT GEPMIGINLILKDPWIATTTDVKGNFTLELPTGHKQIDIKGLNIKDTRRQIMLYSDGTL FT DIELEETTHMLDEVTITSGRIQNVKSTQLGAETLRPTQLKNIPMALGEVDILKMVQALP FT GVKTVGEASSGFNVRGGATDQNLILLNDGTIYNPNHLFGFFAAFNSDMVKEAEIYKSSI FT PAQYGGRISSILDITGKEANKEKFTGSAGIGLVTSKLNLEIPIIKDRTSVLLSGRTTYS FT DWIMKQLPEKSGYKNGTAGFYDLAAIVAHKFNDKHSLNVYGYYSHDRFAFNSNEKYGYN FT NLNASARWRAVFNEKLIGYFSAGYDHYDYNNRETVNASAAYKLSFDINQYFVKADFTNI FT LADKHTLNFGFKSMLYHINSGTYEPEGSESFVKKDVLQKDKALETAFYLGDEWEITPKL FT SVNAGIRYSLFSALGPRSYYQYASGMLPHESTITDTITAGAGKFMKTYHGPEFRLSARY FT AFTDNFSVKAGFNSMRQYIHKLSNTVIMSPTDTWKLSDVNIKPQRGWQAAAGLYLNSPS FT GIWEYSVEGYYKRMSDYLDYRGGAKLLMNHHIETDVINTQGHAYGVELQVKKQVGKLNG FT WMSYTYSRTFLRQNDKRIEKPVNNGDWYPTEYDKPHDFKFVGNYKFTHRYSMSINVDYS FT TGRPTTIPAGQYYDESTQSMRVYYTERNSYRIPDYFRTDISFNIEPSHHLTLLTHSSIS FT IGVYNVTGRKNVYSIYYMPEEGQIKGYQMSIFGVPIPFITYNIKF" FT misc_feature complement(871405..873414) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 42.6, E-value 7.7e-10" FT misc_feature complement(874090..874152) FT /note="Signal peptide predicted for BF0711 by SignalP 2.0 FT HMM (Signal peptide probability 0.729) with cleavage site FT probability 0.317 between residues 21 and 22" FT CDS complement(874149..874889) FT /transl_table=11 FT /locus_tag="BF9343_0678" FT /old_locus_tag="BF0712" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHC3" FT /protein_id="CAH06459.1" FT /translation="MKNRHYLRHILAITALLFNGETIYSQTYPIENYLKAAGDYVTIYN FT GEIELTYSLAQYDNLPYFQGDEFTTGEIIFKGNRYPGLDLHLDLHKDQLCALTPDSHYS FT MIINNEGIEQVNLHNTTFIYFRPTKKTDLNKGFYELLQDGKRLRLLARKTYSVAQINVE FT KIAKTRKHQTEYFIYGVKYYLEYNGIYYPVSNNKSFAKIFPEQHKLIKRYARKHKLNFR FT HDADASLIALTNFCEELIDQKQTR" FT CDS 875112..880892 FT /transl_table=11 FT /locus_tag="BF9343_0679" FT /old_locus_tag="BF0713" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4047 SWALL:Q8A0H4 (EMBL:AE016943) FT (1915 aa) fasta scores: E(): 0, 55.05% id in 1949 aa, and FT to Porphyromonas gingivalis W83 hypothetical protein PG2204 FT SWALL:AAQ67145 (EMBL:AE017179) (1908 aa) fasta scores: E(): FT 1e-134, 29.23% id in 1984 aa" FT /db_xref="GOA:Q5LHC2" FT /db_xref="InterPro:IPR001599" FT /db_xref="InterPro:IPR002890" FT /db_xref="InterPro:IPR008930" FT /db_xref="UniProtKB/TrEMBL:Q5LHC2" FT /protein_id="CAH06460.1" FT /translation="MRIKLICIIVLLSMGMMSWTYAQSYDRLWKQVEQAQQKSLPQTVV FT RLTGEIYQKAKAEKNSPQMLKAYIWQMKFREEITPDSFYVSLNGLEQWAVTTDKPLDRA FT ILHSLIGSMYADYASQNRWKLNQRTDLEEEAPSVDIREWSKNQFVTKVMTEIAVTFQDS FT LLLLDTSSRSYIPFVELGVTSDYYHHDMYHLLASRAITSLENLSGFGRDSLINVRIEEI FT YQHMMNSYRRTDNHDALLLTTLDYLQWKRLTDIDFRPYRAPEGKLGLTQDPYLAALDKL FT IAENKSHDVCAEVYLLKAQAAMDAGVPASALQLCEEAISRYPDYRRINALKELKQEILR FT PDLTVQSPSTVYPGEEFDLKVSFKNLKDFTVELYVINLPARPNTVEAPNDAFLKKHGRL FT LSSEHYVLFPSDDYKVKDSIYHIKASETGLYALRVIPGVKVRSNVSKFLYSTCFKVLTR FT SLPSNLSEVAILDAMSGKPLQGVVLSFFDRQNKQLLTATTNTEGKVQFASSEKYRYLTA FT AKGNDTAMPQMYLWGGDYNFADHSKPVSVVTLLTDRSVYRPGQTVYVKGIAYEQYPDSA FT HVIAGQEYTLTLSDANGQEISAKKLRTNDFGSFTAEFVLPSVCLNGTFSLNTQNGFRSI FT RVEDYKRPTFDITFEPVTESYRLGDRVELKGSVKTFSGVPLQDIPVAYTITRSLYTWRM FT WGMNPVILASDTVRLGVDGNFEIPVDLKPDTSNPDLGDGDNTSLYYDYKVQLSVTNVAG FT ETQTSETSLRAGKTSLLLFADISGLICKDDSVKATFRVNNLDRKPVSVEGSYRLFLISD FT YQKSKPLKEQDVSDQPALSGSFRSNEEILFSDWKKLPSGAYKLVASVKDDQGRKVDAEK FT VVILFASDDKRPPVSMPLWCYEVNTRFDAAHPALFYFGTSEKDTYVLMDVFCGNKHLES FT KLLHLSDSLVRFEYPYREAYGNGLGITFVFVRKGVVYEQEVSLIKRLPDHNLNMRWDVF FT RDKLRPGQEEEWKLTIRNPQKSPVLAEMLATMYDASLDKIWKTNQSLQLHYQLSVPIAR FT WRRDYVGSNYFYFGFRRTDFKVPPFSYDHFDLPPVLYAVAEMLSVTNDAAPTTRYARLR FT GMGAAKPQMKSAAVADVVFESEMVPVTEESGMAMSMDNADMGRTTDIELRTDFAETAFF FT YPQLHTNVQGEVSFSFRMPQSLTTWNFRGYAHTQDMMTGQMDATAVTSKEFMLTPNLPR FT FVRVGDHTSMAASVSNLTGKNLSGTVKLVLFDPMTDQVISTQQKKFNAGAGQSVGVSFL FT FTVTDKYELLGCRMIAEGGNFSDGEQHLLPVLSDKENLTETLPMPVRGEQTRTFSLADL FT FNHHSKTATNRRLTVEFTSNPAWYAVQALPALSQPRNDDAISWATSWYANTMASYIMNA FT QPRIQAIFDSWKLQGGTKESFLSNLQKNQEVKNILLSESPWVMEATSESEQKERIATLF FT DLNNIRNCNTAALLKLKELQLPDGSWSWYKGMDGSLFVTDFIVEQNARIALLTGKPLEG FT GALDMQQAAFGYLHKEALQEYRSIREAEKVGNKSEGISRSALKYLYLIAVSGEKVPASV FT KEGYDYFLSKVAPSLSQQSVTEKAWSAIVLQKAGKVKEAQEFMASLKEYLTQTDEQGMF FT FDRTDSPYAWNNLKVPAHVDVMEAFEMVGSNATIVEEMKMWLLKQKQTQQWDSPVATAN FT AVYALLYRGTNLLDNQGDVRIVLGNEVLETISPAKTTVPGLGYIKKTFTDKKTVNTDEI FT IVEKRDPGIAWGAVYAQFEENLDKVVRQGSGLNVDKKLYVETIVNNNRRLQPVIGKTQL FT KVGDKVVVRLTVRLDRTMDFVQLKDQRAACLEPVEVLSGYRNVGDVGCYVAVKDASTDF FT FFDTLNKGTYVLEYSYRVDRAGSYEAGIATIQSAYAPEYAAHSASARYEVSQ" FT misc_feature 875112..875183 FT /note="Signal peptide predicted for BF0713 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.572 between residues 24 and 25" FT misc_feature 875124..875177 FT /note="1 probable transmembrane helix predicted for BF0713 FT by TMHMM2.0 at aa 5-22" FT CDS 881071..881421 FT /transl_table=11 FT /locus_tag="BF9343_0680" FT /old_locus_tag="BF0714" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHC1" FT /protein_id="CAH06461.1" FT /translation="MKIKKLFTILTVLCFSALAGVVFLKFVDNKKNARDIALANVESLA FT NAEGDGIGNEDNPSTTIKKCVSSSEFTKDDSTGEYYLVCNSGTTESVIYRCPSGTTEGH FT KDWIYSFLYCTR" FT misc_feature 881071..881127 FT /note="Signal peptide predicted for BF0714 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.938 between residues 19 and 20" FT misc_feature 881083..881151 FT /note="1 probable transmembrane helix predicted for BF0714 FT by TMHMM2.0 at aa 5-27" FT CDS 881441..882565 FT /transl_table=11 FT /locus_tag="BF9343_0681" FT /old_locus_tag="BF0715" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="InterPro:IPR015943" FT /db_xref="UniProtKB/TrEMBL:Q5LHC0" FT /protein_id="CAH06462.1" FT /translation="MMVLKNKWKNRFILILFMVGFVFFACKEETDLYFNGDITVIKSFD FT NDTLLSPVKVELEDIYDGSVLAYDSLLFFTSHKYSDCWMYVFSVNSGKHIASLCPKGQG FT PNDYLSCKNSQQFIRENGELKLWVRDNAKSARLLNITKSIETGATVCDAIIPMDWNKYF FT VYPATTLFFLKDGYILGQNQCEEQYSKGKEYIPRKFYLYKDSLGNKVKEYKLFNRPVIL FT KDDKYDVLSGMFYANHSYIHPDQTKVAIAMQRVAQITILDVKSGKQVGYRMDDTLDFSD FT IEQNLECIRYYYTSAAVNSRYIFALYIDQAEMGGKYPFKSKTVHVFNWEGRPVYKIQLD FT KEISWITLDPQNNRLYAQGEDDSIWAYDVSWLSK" FT misc_feature 881441..881521 FT /note="Signal peptide predicted for BF0715 by SignalP 2.0 FT HMM (Signal peptide probability 0.977) with cleavage site FT probability 0.555 between residues 27 and 28" FT CDS 882573..883103 FT /transl_table=11 FT /locus_tag="BF9343_0682" FT /old_locus_tag="BF0716" FT /product="possible oxidoreductase" FT /note="Limited similarity to Bacillus cereus FT thiol-disulfide oxidoreductase ResA or BC1473 FT SWALL:RESA_BACCR (SWALL:Q81FU5) (173 aa) fasta scores: E(): FT 0.78, 23.39% id in 171 aa, and to Yersinia pestis FT similarity ResA_Bacsu ResA protein from Bacillus subtilis FT YPO1947 SWALL:Q9ZC57 (EMBL:AL031866) (165 aa) fasta scores: FT E(): 0.11, 23.22% id in 155 aa" FT /db_xref="GOA:Q5LHB9" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR013740" FT /db_xref="UniProtKB/TrEMBL:Q5LHB9" FT /protein_id="CAH06463.1" FT /translation="MGKLGILSLMFCTIVLLSCGKKNNVYPELEAFIGKEIIFSDKNFN FT TVGNKAFKDQFLLISYVDSGNCTPCSLEKMQYMKTNKRRLLDTHTGVLMIVHEKDTFTV FT NEVFRQMHVSYPIFFDSLGCFKKENGIFDNPLYQDFVIDRSNKVVWLGNPLRNKQSWQQ FT YEKAISMLMDSGK" FT CDS 883198..884325 FT /transl_table=11 FT /locus_tag="BF9343_0683" FT /old_locus_tag="BF0717" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4048 SWALL:Q8A0H3 (EMBL:AE016943) (373 aa) fasta FT scores: E(): 6e-97, 72.06% id in 358 aa, and to FT Porphyromonas gingivalis W83 hypothetical protein PG0320 FT SWALL:AAQ65534 (EMBL:AE017173) (362 aa) fasta scores: E(): FT 1e-20, 29.08% id in 361 aa" FT /db_xref="InterPro:IPR008962" FT /db_xref="InterPro:IPR011467" FT /db_xref="UniProtKB/TrEMBL:Q5LHB8" FT /protein_id="CAH06464.1" FT /translation="MYSKQLIIIKQRRMKRSLLFIFTLLTITLSAVAQPRISSNKETHH FT FGQIEWKRPVSVEYTITNTGDKPLVLTNVTTSCACSVANWTKTPIAPGEKGTVSATFDA FT KALGHFNKSIGIYSNAQPSLVYLNFDGEVVQEIKDFTKTHPYAIGQIRIDRTDIDFPDA FT HSGEKPVITLGVVNLSDRPYEPVLMHLPPYLKMETNPTVLLKGKKGTITLTLDTKQLMD FT LGLTQSSVYLARFAGDKVGEENEIPVSAVLLPDFSGMTEQDKAVAPVIRLSESKIDLSQ FT VLAKKNKARRDIVITNTGKSPLQISKLQVFNPAVGVALKKTVLQPGESTRLRVTVLKKN FT LGKKKRHLRILMITNDPVQPKVEIDVKATNNESHN" FT misc_feature 883237..883296 FT /note="Signal peptide predicted for BF0717 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.996 between residues 20 and 21" FT misc_feature 884179..884259 FT /note="PS00052 Ribosomal protein S7 signature." FT CDS 884334..885425 FT /transl_table=11 FT /locus_tag="BF9343_0684" FT /old_locus_tag="BF0718" FT /product="putative Lao/Ao arginine transport system kinase" FT /note="Similar to Escherichia coli Lao/Ao transport system FT kinase ArgK or B2918 SWALL:ARGK_ECOLI (SWALL:P27254) (331 FT aa) fasta scores: E(): 7.2e-46, 42.08% id in 316 aa, and to FT Bacteroides thetaiotaomicron putative ArgK protein with FT ATPase and kinase domains BT4049 SWALL:Q8A0H2 FT (EMBL:AE016943) (364 aa) fasta scores: E(): 2.9e-124, FT 92.56% id in 363 aa, and to Porphyromonas gingivalis W83 FT Lao/Ao transport system ATPase PG0321 SWALL:AAQ65535 FT (EMBL:AE017173) (343 aa) fasta scores: E(): 4.2e-89, 70.44% FT id in 335 aa" FT /db_xref="GOA:Q5LHB7" FT /db_xref="InterPro:IPR005129" FT /db_xref="UniProtKB/TrEMBL:Q5LHB7" FT /protein_id="CAH06465.1" FT /translation="MEHPENNEAYKGLVVNAGIEQPSSVNPYLKRKVKKRQLSVSEFVE FT GIVKGDVTILSQAVTLVESVRPEHQATAQEVIEKCLPYSGNSIRVGISGVPGAGKSTSI FT DVFGLHVLEKGGKLAVLAIDPSSERSKGSILGDKTRMEQLSVHPKSFIRPSPSAGSLGG FT VARKTRETIILCEAAGFDKIFVETVGVGQSETAVHSMVDFFLLIQLAGTGDELQGIKRG FT IMEMADGIVINKADGSNIDKAKLAAAQFRNALHLFPAPDSGWTPRVLTYSGFYNLGVKE FT IWDMVYEYIDFVKGNGYFEYRRNEQSKYWMYESINEQLRDSFYHNAKIESMLQEKEQQV FT LRGNLTSFVAAKSLLDTYFEDLK" FT misc_feature 884496..885317 FT /note="Pfam match to entry PF03308 ArgK, ArgK protein, FT score 462.1, E-value 4e-136" FT misc_feature 884613..884636 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(885457..886365) FT /transl_table=11 FT /locus_tag="BF9343_0685" FT /old_locus_tag="BF0719" FT /product="putative transmembrane permease" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4051 SWALL:AAO79156 (EMBL:AE016943) FT (305 aa) fasta scores: E(): 3.3e-96, 83.94% id in 299 aa, FT and to Bacteroides thetaiotaomicron putative permease FT BT2567 SWALL:AAO77674 (EMBL:AE016936) (306 aa) fasta FT scores: E(): 3.3e-21, 30.18% id in 265 aa" FT /db_xref="GOA:Q5LHB6" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q5LHB6" FT /protein_id="CAH06466.1" FT /translation="MEIDKNLKGHALAFTANMMWGLMSPIGKSALAEFSALSVTTFRMV FT GAAAAFWILSAFCKQEQVGHRDMVKIFFASLFALVFNQGIFIFGLSLTSPIDASIVTTT FT SPIITMIVAAIYLKEPVTNKKVLGIFIGAMGALILILSSQAVSAGGGSIWGDLLCMIAQ FT LSFSIYLTVFKGLSQRYSAITINKWMFIYASICYIPFSYQDIASIKWDSISTAAIYQVL FT YVVLCGSFIAYICIMTAQKLMRPTVVSMYNYVQPIVASIAAILMGIGSFGWEKGVAIAL FT VFLGVYFVTQSKSKADLEGVS" FT misc_feature complement(885493..885876) FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 46.6, E-value 4.7e-11" FT misc_feature complement(order(885547..885615,885649..885717, FT 885760..885828,885847..885909,885922..885990, FT 886015..886074,886087..886155,886192..886260, FT 886288..886347)) FT /note="9 probable transmembrane helices predicted for FT BF0719 by TMHMM2.0 at aa 7-26, 36-58, 71-93, 98-117, FT 126-148, 153-173, 180-202, 217-239 and 251-273" FT misc_feature complement(885943..886314) FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 87.1, E-value 3.1e-23" FT CDS 886459..888321 FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0686" FT /old_locus_tag="BF0720" FT /product="putative ABC transport ATP-binding protein FT (pseudogene)" FT /note="Pseudogene. Similar to Bacteroides thetaiotaomicron FT putative ABC transporter ATP-binding protein BT4052 FT SWALL:Q8A0G9 (EMBL:AE016943) (629 aa) fasta scores: E(): FT 7.7e-100, 81.28% id in 625 aa. Note: this CDS contains a FT stop codon at residue 276" FT misc_feature 886555..887268 FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 11.5, E-value 5.1e-07" FT misc_feature 886561..886584 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 887032..887076 FT /note="PS00211 ABC transporters family signature." FT CDS 888296..889543 FT /transl_table=11 FT /locus_tag="BF9343_0687" FT /old_locus_tag="BF0722" FT /product="putative transmembrane transport protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT membrane transport protein BT4053 SWALL:Q8A0G8 FT (EMBL:AE016943) (443 aa) fasta scores: E(): 3.4e-125, FT 76.21% id in 412 aa, and to Shewanella oneidensis conserved FT hypothetical protein so0121 SWALL:Q8EKH2 (EMBL:AE015463) FT (392 aa) fasta scores: E(): 1.4e-66, 46.13% id in 388 aa, FT and to Vibrio cholerae hypothetical protein Vc0265 FT SWALL:Q9KV91 (EMBL:AE004115) (412 aa) fasta scores: E(): FT 2.7e-66, 45.69% id in 383 aa." FT /db_xref="GOA:Q5LHB5" FT /db_xref="InterPro:IPR006685" FT /db_xref="InterPro:IPR010920" FT /db_xref="UniProtKB/TrEMBL:Q5LHB5" FT /protein_id="CAH06468.1" FT /translation="MEQITEKINDLFVSWGFDSSEVGPIMTLVLIIGIAFLADLICRNI FT LLRVVAKLVKKTKATWDDIVFDRKVLIYLSHLVPPIIIYVLIPLAIPNVSALDFIRRIC FT MIYIIAVFLRFISAFLSAVYHVYSEREQFRDRPLKGLLQTAQVILFFIGGIVVISVLID FT KSPMVLLTGLGASAAILMLVFKDSIMGFVSGIQLSANNMLKVGDWIAMPKYGADGTVIE FT VTLNTVKVRNWDNTITTIPPYLLVSDSFQNWRGMQESGGRRVKRSINIDMNSVRFCTSE FT MLAKYKKIQLLTDYVEQTEQVVKEYNKEHHIDNSILVNGRRQTNLGVFRAYLTNYLKSL FT PDVNKNLTCMVRYLQPTEQGIPVELYFFSAVKEWVPYEGIQADVFDHLLAIVPEFGLRV FT FQNPTGEDFREWNRRN" FT misc_feature order(888368..888436,888503..888571,888608..888676, FT 888713..888781,888794..888847) FT /note="5 probable transmembrane helices predicted for FT BF0722 by TMHMM2.0 at aa 25-47, 70-92, 105-127, 140-162 and FT 167-184" FT misc_feature 888719..889495 FT /note="Pfam match to entry PF00924 MS_channel, FT Mechanosensitive ion channel, score 100.7, E-value 2.4e-27" FT CDS 889585..890478 FT /transl_table=11 FT /locus_tag="BF9343_0688" FT /old_locus_tag="BF0723" FT /product="putative AraC-family regulatory protein" FT /note="Similar to Pseudomonas fluorescens activator protein FT MtlR SWALL:O52770 (EMBL:AF047527) (301 aa) fasta scores: FT E(): 1.8e-18, 28.31% id in 279 aa, and to Bacteroides FT thetaiotaomicron putative transcriptional regulator BT4054 FT SWALL:Q8A0G7 (EMBL:AE016943) (298 aa) fasta scores: E(): FT 2.3e-106, 91.27% id in 298 aa" FT /db_xref="GOA:Q5LHB4" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="InterPro:IPR020449" FT /db_xref="UniProtKB/TrEMBL:Q5LHB4" FT /protein_id="CAH06469.1" FT /translation="MNALQSNIIREITPLSDKDCFYIAERYKTEFTYPIHNHAEFELNF FT TEKAAGVRRIVGDSAEVISDYDLVLITGKDLEHVWEQHDCHSKEIREITIQFSSDLFFK FT SFINKNQFDSIRDMLEKAQKGLCFPMSAILKIYPLLDTLASEKQGFYAVIKFLTILYEL FT SLFNEEARTLSSSSFAKIGIHSDSRRVQKVQEYINAHYQEEIRLNQLADMVGMTPVSFS FT RFFKLRTGKNLSDYIIDIRLGFAARLLVDSTMSIAEICYECGFNNLSNFNRIFKKKKEC FT SPKEFRENYRKKKKLV" FT misc_feature 890149..890283 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature 890161..890298 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 30.4, E-value 3.6e-06" FT misc_feature 890197..890262 FT /note="Predicted helix-turn-helix motif with score FT 1678.000, SD 4.90 at aa 213-234, sequence FT IRLNQLADMVGMTPVSFSRFFK" FT misc_feature 890305..890433 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature 890317..890448 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 43.7, E-value 3.6e-10" FT CDS complement(890484..891491) FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0689" FT /old_locus_tag="BF0725" FT /product="conserved hypothetical protein" FT CDS complement(891484..891813) FT /transl_table=11 FT /locus_tag="BF9343_0690" FT /old_locus_tag="BF0724" FT /product="possible HipA-like protein" FT /db_xref="InterPro:IPR017508" FT /db_xref="UniProtKB/TrEMBL:Q5LHB3" FT /protein_id="CAH06471.1" FT /translation="MRQGVVYLNKERVGIITELSSNEYKFRYDDEYFNDPSKPSISLTL FT TKQQQEYTSHYLFPFFANMLSEGHNRIVQARLLQIDEKDDFGILLATAHTDTAGAVTIK FT PLDYD" FT CDS complement(891810..892079) FT /transl_table=11 FT /locus_tag="BF9343_0691" FT /old_locus_tag="BF0726" FT /product="putative DNA-binding protein" FT /note="Similar to Corynebacterium glutamicum predicted FT transcriptional regulator CGL1235 SWALL:Q8NR29 FT (EMBL:AP005277) (75 aa) fasta scores: E(): 0.00024, 40.9% FT id in 66 aa, and to Lactobacillus plantarum transcription FT regulator LP_2654 SWALL:Q88U69 (EMBL:AL935259) (106 aa) FT fasta scores: E(): 0.0018, 40.98% id in 61 aa. Possible FT alternative start site at codon 20" FT /db_xref="GOA:Q5LHB2" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="InterPro:IPR017507" FT /db_xref="UniProtKB/TrEMBL:Q5LHB2" FT /protein_id="CAH06472.1" FT /translation="MLIKQILSIFVSNSQYIGNMKQIGIQIRQRRKMLGINQQTLADLA FT QISINTITKIENGEININFQKLYAILEVLGLELSLKIKNKEGHL" FT misc_feature complement(891837..892001) FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 53.2, E-value 4.9e-13" FT misc_feature complement(891909..891974) FT /note="Predicted helix-turn-helix motif with score FT 1471.000, SD 4.20 at aa 40-61, sequence FT INQQTLADLAQISINTITKIEN" FT CDS complement(892512..893384) FT /transl_table=11 FT /locus_tag="BF9343_0692" FT /old_locus_tag="BF0727" FT /product="conserved hypothetical protein" FT /note="Similar to previously sequenced Bacteroides fragilis FT hypothetical protein SWALL:Q8VST0 (EMBL:AF366394) (277 aa) FT fasta scores: E(): 7.2e-39, 78.96% id in 290 aa, and to FT previously sequenced Bacteroides fragilis hypothetical FT protein SWALL:Q8VU11 (EMBL:AF285774) (267 aa) fasta scores: FT E(): 3.2e-34, 62.75% id in 290 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHB1" FT /protein_id="CAH06473.1" FT /translation="MAIAYDGINYFPVGVNFMEENAMEVIEAKYGIKGSAIVLKLMCKI FT YKEGYYIRWDEEQCLIFANKAGREVQAEEVQGIIEILFTKGILDRNSYQENGILTSESI FT QKVWMEATKRRKRELSELPYLMVKPEKENGKADTPPALQEIQQPELFKKEKTPVNPKNV FT VHHVAVDAKNACNSGQSKVKEKKAEENKEFPPSAPPKGEEEERKGDSAYLPIPGYAFNT FT MTHNYSGLMDTLKRLSITDTGEVNSILRLSDYGRKGTTVWKLIANTCWSDIGAKGRYLI FT AALNKTKRR" FT misc_feature complement(892668..892727) FT /note="PS00636 Nt-dnaJ domain signature." FT CDS complement(893527..893874) FT /transl_table=11 FT /locus_tag="BF9343_0693" FT /old_locus_tag="BF0728" FT /product="conserved hypothetical protein" FT /note="Similar to previously sequenced Bacteroides fragilis FT hypothetical 13.9 kDa protein SWALL:Q8VU10 (EMBL:AF285774) FT (115 aa) fasta scores: E(): 3e-29, 60.87% id in 115 aa, and FT to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT0593 SWALL:AAO75700 (EMBL:AE016928) (121 aa) FT fasta scores: E(): 6.6e-22, 54.08% id in 98 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LHB0" FT /protein_id="CAH06474.1" FT /translation="MKKLKSPASQSEAMKLRWKKRIVFEKGYTESCAEWMAERLEALLD FT HMQYGHATVAYRKQNGSFQLVKATLIYYEAEFRKKYDPTKIEGAVVYWNVDEQRWTTFQ FT VENFMEWRPIV" FT CDS complement(893974..894204) FT /transl_table=11 FT /locus_tag="BF9343_0694" FT /old_locus_tag="BF0729" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHA9" FT /protein_id="CAH06475.1" FT /translation="MKHYECLKLLITLYQDGAMGIKKETSQVALARYIDDKKLLGNIRN FT GIFIPLKFSTILKETNTIWNEMLRDKSIGIK" FT CDS complement(894266..894388) FT /transl_table=11 FT /locus_tag="BF9343_0695" FT /old_locus_tag="BF0730" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LHA8" FT /protein_id="CAH06476.1" FT /translation="MQHFIQIKITKIKKIMNYENKQQEEKKRIQKKQNGQQANL" FT repeat_region 894502..894533 FT /note="label: fixR" FT repeat_region 894502..894731 FT /note="invertible region (fin region) DD; inactive in FT shotgun" FT promoter complement(894532..894563) FT /note="consensus for PS 7" FT repeat_region complement(894704..894731) FT /note="label: fixL" FT CDS 894922..895458 FT /transl_table=11 FT /gene="upgY" FT /locus_tag="BF9343_0696" FT /old_locus_tag="BF0731" FT /product="putative transcriptional regulator" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative transcriptional regulator UpaY SWALL:Q93QW6 FT (EMBL:AF189282) (172 aa) fasta scores: E(): 3.4e-09, 30.67% FT id in 163 aa, and to previously sequenced Bacteroides FT fragilis putative transcriptional regulator UpdY FT SWALL:Q8VSS9 (EMBL:AF366394) (179 aa) fasta scores: E(): FT 3.5e-27, 45.93% id in 172 aa, and to previously sequenced FT Bacteroides fragilis putative transcriptional regulatory FT protein UpbY SWALL:Q9F769 (EMBL:AF285774) (174 aa) fasta FT scores: E(): 2.5e-09, 31.73% id in 167 aa" FT /db_xref="GOA:Q5LHA7" FT /db_xref="InterPro:IPR005824" FT /db_xref="InterPro:IPR006645" FT /db_xref="InterPro:IPR008991" FT /db_xref="InterPro:IPR014723" FT /db_xref="UniProtKB/TrEMBL:Q5LHA7" FT /protein_id="CAH06477.1" FT /translation="MEVEKETEIWFAMRATYRRETDAMRLLAKENLGCFVPMQYKISIK FT KGKKVRVLVPIIHNLIFIHACPSEVKRVKSMVAYLQYITDTRSGKKIIIPDNEMQRFIA FT VAGTYSDHLLYFQPDELNLSKGTKVRITGGDFEGQEGVFLKVKGARDRRVVIAIQGVIA FT VAMATIHPDLIEVIK" FT misc_feature 894922..917651 FT /note="PS_7/PS_G region lipopolysaccharide biosynthesis FT locus" FT /note="label: PS_G" FT CDS 895478..895966 FT /transl_table=11 FT /gene="upgZ" FT /locus_tag="BF9343_0697" FT /old_locus_tag="BF0732" FT /product="putative transcriptional regulator" FT /note="Similar to previously sequenced Bacteroides fragilis FT hypothetical 18.5 kDa protein UpbZ SWALL:Q9F768 FT (EMBL:AF285774) (161 aa) fasta scores: E(): 3.9e-28, 48.44% FT id in 161 aa, and to previously sequenced Bacteroides FT fragilis putative transcriptional regulator UpaZ FT SWALL:Q93QW5 (EMBL:AF189282) (157 aa) fasta scores: E(): FT 6e-28, 50.95% id in 157 aa, and to previously sequenced FT Bacteroides fragilis putative transcriptional regulator FT UpdZ SWALL:Q8VSS8 (EMBL:AF366394) (160 aa) fasta scores: FT E(): 1.1e-27, 49.35% id in 156 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT1357 FT SWALL:AAO76464 (EMBL:AE016931) (122 aa) fasta scores: E(): FT 4.1e-09, 36.03% id in 111 aa" FT /db_xref="InterPro:IPR010570" FT /db_xref="UniProtKB/TrEMBL:Q5LHA6" FT /protein_id="CAH06478.1" FT /translation="MTLSEEVASLQRAAHDLMYLGMDGSPIYSDDLSRRNNEVYRLTTT FT LYNSGVQGSTVEEQASVCLALLMGYNASFIDHGEKREHVQKILDRCWDILDTLPASLLK FT LRLLTACYGEVFDEPLADEARAIIASWDSVSLTTEQQEAINEFQTVVDNPYPWEYVEE" FT CDS 895989..897197 FT /transl_table=11 FT /locus_tag="BF9343_0698" FT /old_locus_tag="BF0733" FT /product="putative capsular polysaccharide biosynthesis FT protein" FT /note="Similar to Streptococcus suis capsular FT polysaccharide protein Cps9E SWALL:Q9RG42 (EMBL:AF155805) FT (608 aa) fasta scores: E(): 4.7e-17, 28.84% id in 312 aa, FT and to Vibrio parahaemolyticus putative capsular FT polysaccharide biosynthesis protein D vp0197 SWALL:BAC58460 FT (EMBL:AP005073) (396 aa) fasta scores: E(): 3.2e-62, 44.89% FT id in 392 aa, and to Vibrio vulnificus predicted FT nucleoside-diphosphate sugar epimerases VV10811 FT SWALL:Q8DDZ4 (EMBL:AE016799) (396 aa) fasta scores: E(): FT 5.7e-62, 45.15% id in 392 aa" FT /db_xref="GOA:Q5LHA5" FT /db_xref="InterPro:IPR003869" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q5LHA5" FT /protein_id="CAH06479.1" FT /translation="MLNVDNFIGENITFRRSSMFAPDIAANSDRLRQEVEGKSLLVIGG FT AGSIGSSYIKAILPFKPSKLVVIDLNENGLAELTRDLRSTYGLYIPKEYRTYTLNFADP FT IFERMFRKEQGFDIVANFSAHKHVRSEKDEYSVQALIENNVIKAKKLLDLLSEFPPRHF FT FCVSTDKAANPVNIMGASKRIMEDMIMAYSSKFKVTTARFANVAFSNGSLLAGFIDRIM FT KKQPLAAPNDVKRYFVSPEESGQICMLACVLGNNGEIFFPKLGEEKMITFSSICDRFLR FT TLGYEKKECATDEEARRYAAEMPDDSKIYPVVYFESDTTGEKGYEEFYVPGEKLNLERF FT SSLGVIEDASKRPLSELDSFFDELESLFALPDCHKSDIVTALKRFLPNFEHVEKGKNLD FT QKM" FT CDS 897217..898350 FT /transl_table=11 FT /locus_tag="BF9343_0699" FT /old_locus_tag="BF0734" FT /product="putative DegT/DnrJ/EryC1/StrS aminotransferase FT family O-antigen related protein" FT /note="Similar to Plesiomonas shigelloides O-antigen FT related WbgX SWALL:Q9F743 (EMBL:AF285970) (384 aa) fasta FT scores: E(): 1.3e-42, 35.95% id in 381 aa, and to FT Methanococcus jannaschii hypothetical protein MJ1066 FT SWALL:YA66_METJA (SWALL:Q58466) (386 aa) fasta scores: E(): FT 5.2e-48, 41.01% id in 373 aa, and to Plesiomonas FT shigelloides ORF7P SWALL:Q9S0X9 (EMBL:AB025970) (384 aa) FT fasta scores: E(): 1.3e-42, 35.95% id in 381 aa" FT /db_xref="GOA:Q5LHA4" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q5LHA4" FT /protein_id="CAH06480.1" FT /translation="MEYQIPLFQLNFNEDEIQAVADTIRSKWISTGPKCEELENLFIEM FT MNVKYAVSLSNCTDALHLACLTSGIQPGDEVLCPSLTFAASVNCIRYVGATPVFCDIVG FT PNHINIDPEDIKRKITSKTKAIIVVHMAGFPAKMDEIMSIAKEYDLKVIEDACHGPLSE FT YKGKKLGTIGDVATFSFFSNKNISTGEGGMLITNNEKIASKARLLRSHGMTTMSYQRAK FT GHATAYDIIDLGYNFRMDDIRASIGCVQMRKLQADLEKRVRVRSKYIEELSKIGGLIVP FT FADNTEFVSNYIMPVVLVNSTKDKRDKIRNRIHASGIQTSNHYPAIHKFSIYKDYGAVL FT PQTEYVADNEITLPMYADLTDEQIEFVTHTVDVAING" FT misc_feature 897244..898332 FT /note="Pfam match to entry PF01041 DegT_DnrJ_EryC1, FT DegT/DnrJ/EryC1/StrS aminotransferase family, score 456.8, FT E-value 1.5e-134" FT misc_feature 897454..897546 FT /note="PS00044 Bacterial regulatory proteins, lysR family FT signature." FT CDS 898343..898951 FT /transl_table=11 FT /locus_tag="BF9343_0700" FT /old_locus_tag="BF0735" FT /product="putative capsular polysaccharide related FT hexapeptide transferase family protein" FT /note="Similar to Escherichia coli capsular polysaccharide FT NeuD protein SWALL:Q46674 (EMBL:U05248) (207 aa) fasta FT scores: E(): 3.6e-11, 28.29% id in 205 aa, and to FT Caulobacter crescentus putative acetyltransferase LpsB or FT CC1011 SWALL:O85353 (EMBL:AF062345) (215 aa) fasta scores: FT E(): 1.4e-13, 30% id in 200 aa, and to Bacteroides FT thetaiotaomicron putative hexapeptide transferase family FT protein BT2943 SWALL:AAO78049 (EMBL:AE016938) (552 aa) FT fasta scores: E(): 3.6e-13, 33.83% id in 198 aa" FT /db_xref="GOA:Q5LHA3" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR018357" FT /db_xref="InterPro:IPR020019" FT /db_xref="UniProtKB/TrEMBL:Q5LHA3" FT /protein_id="CAH06481.1" FT /translation="MDNKVILVGGFHEIIELCEDNDIEIAGIIDNYLTNDTYWGYPIIG FT TDDKAKVLFETYKNVPVLITPDVPHVRYKLYHYYKSIGFQVASLISRDASISRSAIIGE FT GTIIQRGANLSSNIKIGQMVKVNTNANIMHDCLIGNYVTVAPNAVLLGKVEIDDKAYIG FT ANATLLPSVKIGENVTVGAGSVVTKSVRPNTVVKGSPAK" FT misc_feature 898637..898690 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 8.3, E-value FT 5.8" FT misc_feature 898691..898744 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 6.1, E-value FT 11" FT misc_feature 898745..898798 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 12.4, FT E-value 0.93" FT misc_feature 898772..898858 FT /note="PS00101 Hexapeptide-repeat containing-transferases FT signature." FT misc_feature 898799..898852 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 7.5, E-value FT 7.5" FT misc_feature 898853..898906 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 15.8, FT E-value 0.089" FT CDS 899012..900067 FT /transl_table=11 FT /locus_tag="BF9343_0701" FT /old_locus_tag="BF0736" FT /product="putative sugar-phosphate nucleotidyl transferase" FT /note="Similar to Leptospira interrogans FT mannose-1-phosphate guanyltransferase La1611 SWALL:Q8F5Q6 FT (EMBL:AE011339) (351 aa) fasta scores: E(): 1.5e-30, 31.44% FT id in 353 aa, and to Pseudomonas aeruginosa similar to FT nucleotidyl transferase SWALL:Q8KNA1 (EMBL:AF498403) (348 FT aa) fasta scores: E(): 5.7e-27, 27.87% id in 348 aa, and to FT Campylobacter jejuni putative sugar-phosphate nucleotide FT transferase cj1329 SWALL:Q9PMX0 (EMBL:AL139078) (341 aa) FT fasta scores: E(): 8.5e-27, 30.14% id in 345 aa" FT /db_xref="GOA:Q5LHA2" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/TrEMBL:Q5LHA2" FT /protein_id="CAH06482.1" FT /translation="MLLDKIQNLIIQSDISIFQSMKKMDEEKVKLLFVFRGDCFVGILT FT IGDIQRAIIKQNDTSMQINNILDQNKVFAYKGESLEIIKNKMIHLRAECMPILDSKGEL FT VDVLFWKDLFIDEVRVDDRKIDLPVVIMAGGKGTRLKPLTNVIPKPLIPIGDKTILEAI FT LDQFESIGCSKFYMSVNYKYDILKFYLAQLDHKYDIRFFKEDKPLGTIGSVSLLKDKIS FT TPFFVSNCDIIIDQDYRDVYDYHINNSNDLTIVTAVKRTRIPYGVIETIENGLMTELIE FT KPEFTYMINSGVYILQPELINEIPENELFHITHLMEKVKSRGGKIGCFPVSEKSWTDIG FT EWNEYLKLLGI" FT misc_feature 899015..899173 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 19.2, E-value 0.0087" FT misc_feature 899204..899365 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 11.8, E-value 0.2" FT misc_feature 899393..900064 FT /note="Pfam match to entry PF00483 NTP_transferase, FT Nucleotidyl transferase, score 63.9, E-value 2.9e-16" FT CDS 900135..901586 FT /transl_table=11 FT /locus_tag="BF9343_0702" FT /old_locus_tag="BF0737" FT /product="putative polysaccharide transporter/flippase" FT /note="Similar to Shigella boydii O-antigen flippase Wzx FT SWALL:Q93CS0 (EMBL:AF402314) (470 aa) fasta scores: E(): FT 2.3e-30, 26.53% id in 471 aa, and to Bacillus subtilis TuaB FT protein SWALL:O32273 (EMBL:Z99122) (483 aa) fasta scores: FT E(): 3.8e-33, 26.66% id in 465 aa, and to Escherichia coli FT O157:H7 probable export protein WzxC or z3210 or ECS2851 FT SWALL:Q8X7P3 (EMBL:AE005430) (492 aa) fasta scores: E(): FT 3.1e-30, 23.31% id in 459 aa" FT /db_xref="GOA:Q5LHA1" FT /db_xref="InterPro:IPR002797" FT /db_xref="UniProtKB/TrEMBL:Q5LHA1" FT /protein_id="CAH06483.1" FT /translation="MAKTILEKTITGFKWTSTSTVISSIAKFLQIVILTRYLDKNDFGL FT VAIALLIISFTDIFLDMGISSAVMYRKNITKNEYSSLFWLNIVMGIILFFLLLISTPFI FT AEYYKLSELKYILPLLSLNLLFLSTSRLQRTIQQKEFRFKFVALIDIFSSCLMLLSAMI FT LAVMDFGIYSLVFSTLIGTFFISIVYLILCFHIEKNVKLHFAFNDTKPFLSIGCYQIGS FT AVFDFFSRELDIILISNVYSLEMLGVYSLCKQLVLKIYYLINSILPKVVTPFLATIQSD FT VLLLKKTFLKLVQIISIINYPLFFIIAAFSPLILLIVYGRSYQEYWIILTILSVVYGIN FT CTSTPVSSLQIALGRTDIGLKWTICRIILSCLLLGIGSCFNFNIFITFILFCTLVSVPL FT MVRMNLHKMISVNLVEYLTKQLFPLKVSFILTIIALLFQKIYTFSLFELFLGIILYIAI FT YLTICYIFRKKLFISLLRTIKNRKE" FT misc_feature 900159..900971 FT /note="Pfam match to entry PF01943 Polysacc_synt, FT Polysaccharide biosynthesis protein, score 108.5, E-value FT 1.1e-29" FT misc_feature order(900195..900248,900276..900344,900381..900449, FT 900477..900530,900567..900635,900645..900713, FT 901017..901085,901113..901181,901218..901274, FT 901284..901337,901395..901448,901476..901532) FT /note="12 probable transmembrane helices predicted for FT BF0737 by TMHMM2.0 at aa 21-38, 48-70, 83-105, 115-132, FT 145-167, 171-193, 295-317, 327-349, 362-380, 384-401, FT 421-438 and 448-466" FT CDS 901583..902746 FT /transl_table=11 FT /locus_tag="BF9343_0703" FT /old_locus_tag="BF0738" FT /product="possible glycosyltransferase protein" FT /note="Limited similarity to Thermoanaerobacter FT tengcongensis predicted glycosyltransferases Rfag2 or FT TTE0275 SWALL:Q8RCY0 (EMBL:AE013000) (404 aa) fasta scores: FT E(): 0.0047, 21.21% id in 297 aa" FT /db_xref="GOA:Q5LHA0" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q5LHA0" FT /protein_id="CAH06484.1" FT /translation="MKSKILIVGESTDNHVRRLLTHLNILDKEHQLDIDIFDLYFHSRE FT TSFLCYKIYNTKHLFFRFLYKIKILRSLLNLLDVYISFLPILKHRYDLVNVHLWNRNSF FT FLYPFYRIISPKLMISPWGSDVYRINAFDKLIAKLCYHKVDYISVAPIKFRDDIATLFN FT VPDGKFVNLGFGSDTIDAINAQKKLSKEEAKKKLGLEDSYIITCGYNASISQNHHKLLD FT AIEKIQSQLPENLCLVFPFTYGGTELYKKEIKQRLETCGIHYIMYTNFLSLDKLVALRK FT SSDIFIHMQSSDAYSASVQEYLLCDTAVINATWLRYPTLEKYGKPYKQIDTFEQLPNSI FT LEILSGDFPVISSKLKLEIINNGWNEKAKYWMNFYIERCAQKSNDKF" FT CDS 902779..903879 FT /transl_table=11 FT /locus_tag="BF9343_0704" FT /old_locus_tag="BF0739" FT /product="possible O-antigen related transmembrane protein" FT /note="Limited similarity to Salmonella enterica O-antigen FT polymerase WbaA SWALL:Q01418 (EMBL:M84642) (359 aa) fasta FT scores: E(): 0.00023, 23.58% id in 352 aa, and to FT Leishmania tarentolae Murf1 protein murf1 SWALL:Q33559 FT (EMBL:M10126) (443 aa) fasta scores: E(): 0.00032, 23.24% FT id in 327 aa, and to Phytomonas serpens Murf1 SWALL:Q9XKY5 FT (EMBL:AF079967) (441 aa) fasta scores: E(): 0.0012, 22.97% FT id in 383 aa, and to Lactobacillus plantarum polysaccharide FT polymerase Cps2H or LP_1204 SWALL:CAD63717 (EMBL:AL935255) FT (379 aa) fasta scores: E(): 0.0019, 22.5% id in 320 aa" FT /db_xref="GOA:Q5LH99" FT /db_xref="UniProtKB/TrEMBL:Q5LH99" FT /protein_id="CAH06485.1" FT /translation="MLGILLDSFRVNKNIKIVFIIWLYIFLCFGYMTGSDWRAYELQYQ FT SADYYYYNATYEKGFYTLFYFLKLFISDFFITLAFLKCIYLYTLIRLFRQITPLWISSI FT SILLPISLLFMLVDNPLRFMTSIIFLNIGLGYLLNGHTKKFLMIAVLAPFFHITTIFIV FT FILLLIKFDNIIFRSKRLILIVLFFIVSFAFSSTGPVSNLISQLIPQLELLGTKNFGSY FT SVEDNDAFFTIGSMINAFLFIIIVSFRNYIVEHNQQYGKKIYSYIIIYFFLFRILLIVP FT SGFRLVIPMGYFLSIAVAMLLKKGNLLKLLFVSYFMLLMSKSLWQGYVYLPYSNSIWYI FT LTEHKQYSERDNNNINFYRQRTGNSL" FT misc_feature order(902827..902895,902953..903021,903070..903129, FT 903214..903282,903319..903387,903469..903537, FT 903574..903642,903706..903774) FT /note="8 probable transmembrane helices predicted for FT BF0739 by TMHMM2.0 at aa 17-39, 59-81, 98-117, 146-168, FT 181-203, 231-253, 266-288 and 310-332" FT CDS 903891..905006 FT /transl_table=11 FT /locus_tag="BF9343_0705" FT /old_locus_tag="BF0740" FT /product="possible glycosyltransferase" FT /note="Limited similarity to Staphylococcus aureus Cap5I FT SWALL:P95702 (EMBL:U81973) (369 aa) fasta scores: E(): FT 0.00025, 24.12% id in 373 aa, and to Staphylococcus aureus FT capsular polysaccharide synthesis enzyme Cap5I or sav0157 FT or sa0152 SWALL:Q99X62 (EMBL:AP003358) (369 aa) fasta FT scores: E(): 0.00061, 23.38% id in 372 aa, and to Aquifex FT aeolicus mannosyltransferase c mtfc or AQ_516 SWALL:O66802 FT (EMBL:AE000693) (368 aa) fasta scores: E(): 0.21, 22.64% id FT in 340 aa, and to Clostridium acetobutylicum diverged FT glycosyltransferase domain containing protein CAC2326 FT SWALL:Q97GP0 (EMBL:AE007733) (436 aa) fasta scores: E(): FT 1.4, 26.81% id in 138 aa" FT /db_xref="GOA:Q5LH98" FT /db_xref="UniProtKB/TrEMBL:Q5LH98" FT /protein_id="CAH06486.1" FT /translation="MKKIAMIVKTNSLEFDDRIRKVSLALSKDADVKIFALLNDNTEKD FT DITSYRIHYHSFSLRSRALFPSKKLLLLKTLEFYLKVIMHVRKYDVLWANDENTFLFPL FT FAKKNKTVWDLHEIPELFLNNKCKWIFHYIERKSLKILHANPFRLDYLYEQGVISDKSK FT HSYIRNYPDHIFLEKCIESPVYERFIKWLKGEKYVYIQGVEQKDRYPFNSIACVLDATN FT YKVVIIGGLDSDEKVELEKKYGDKFKERVFLAGWTNQLSLSLYLKDAIFTVILYTKDTP FT NNRYCEANRFYQACSLAIPIICGSNESMKSIVDEFKMGVYLESDGRDLHELIGAVKMVD FT SNYSLYKDNSIQCRKMFIWDENMVKKEWWDK" FT CDS 905016..906035 FT /transl_table=11 FT /locus_tag="BF9343_0706" FT /old_locus_tag="BF0741" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="GOA:Q5LH97" FT /db_xref="InterPro:IPR002509" FT /db_xref="InterPro:IPR011330" FT /db_xref="UniProtKB/TrEMBL:Q5LH97" FT /protein_id="CAH06487.1" FT /translation="MMDTLITLDYELFLNDKVGTIDKCLIEPMEQLNKVCLIHDIKVTI FT FVDAAYIYRLKQLSEKSKDARNEYNKVINHVKSLSQFGHDIELHIHPQWFYSNFDNKIW FT NLDWEHYKLSDMSFDEVIPRFNECVHLLEEIVDSKVIGFRAGGYSIQNFNLFADLLNSN FT GIKIDSSVLPRARTARDNKTHNYDYRFVPHKALYRFLTNVVNEDKNGYNWELPISTFRQ FT NLIGYLLDKRKNMRAYQSVNWGDGGDDPLPFYKRITSGVKKLSLFHTISASIDYQSFFH FT INKVYQHHKHLKSDFFTIIGHPKNFSPDSLSYLNQFLYRLEKDNIRIITLKDLLKNIE" FT CDS 906032..907129 FT /transl_table=11 FT /locus_tag="BF9343_0707" FT /old_locus_tag="BF0742" FT /product="possible capsular polysaccharide related protein" FT /note="Limited similarity to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8H SWALL:P72374 FT (EMBL:U73374) (359 aa) fasta scores: E(): 0.00027, 22.51% FT id in 262 aa, and to Staphylococcus aureus capsular FT polysaccharide synthesis enzyme Cap8H or mw0131 FT SWALL:Q8NYP6 (EMBL:AP004822) (359 aa) fasta scores: E(): FT 0.00015, 23.01% id in 265 aa, and to Streptococcus FT pneumoniae capsular polysaccharide biosynthesis WciK or FT sp0352 SWALL:Q9AHC9 (EMBL:AF316639) (358 aa) fasta scores: FT E(): 0.00072, 26.73% id in 318 aa" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q5LH96" FT /protein_id="CAH06488.1" FT /translation="MKKIIVISPSITATHIIKRVTALHQAGFIVEVFAFNRGDGVGGNY FT PPGVNVTDLGLVPNGKGYVGKFFRATSKLKKIFNLYRNENCMYFACSFDLALITLLFSN FT KKYIYQISDLVYGYFPTTLIRSFFKTIDKLIIKKSITTVVTSEGFIKYLGSKNIANKFI FT YQPNNLPKEVLGKNIEISECPTNDHFIFSFIGFVRADSVLLFAKTVGEYFPNYSFHFYG FT KAMNMTVIDNLIKEYPNIHYFGPYKYPDDLQNIYEKVDLVVSCYDVKSLNVRLAEPNKL FT FESIYYGKPIIVSSHTFLAEKVNSMGVGFGVDASDMQTIKEFISGLTSTEIKNRINKIK FT SIPKATMIDDGAIQLLKKIETNFKN" FT CDS 907147..908355 FT /transl_table=11 FT /locus_tag="BF9343_0708" FT /old_locus_tag="BF0743" FT /product="putative UDP-ManNAc dehydrogenase" FT /note="Similar to previously sequenced Bacteroides fragilis FT UDP-ManNAc dehydrogenase MnaB SWALL:Q9RGJ9 (EMBL:AF125164) FT (408 aa) fasta scores: E(): 2.2e-136, 88.27% id in 401 aa, FT and to Bacteroides thetaiotaomicron FT UDP-N-acetyl-D-mannosamine dehydrogenase BT2945 FT SWALL:AAO78051 (EMBL:AE016938) (400 aa) fasta scores: E(): FT 1.8e-103, 66.08% id in 401 aa, and to Acinetobacter lwoffii FT putative NDP-N-acetyl-D-galactosaminuronic acid FT dehydrogenase WeeB SWALL:Q9RMD5 (EMBL:AJ243431) (417 aa) FT fasta scores: E(): 3.7e-74, 52.67% id in 412 aa" FT /db_xref="GOA:Q5LH95" FT /db_xref="InterPro:IPR001732" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR014026" FT /db_xref="InterPro:IPR014027" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017476" FT /db_xref="UniProtKB/TrEMBL:Q5LH95" FT /protein_id="CAH06489.1" FT /translation="MMKACFMGLGYIGLPTAIIAAKHGVQVTGVDINPKVVEMTNQGKL FT HIIEPGMQDLLEEVVSKGQLIASTTPKESNAYFIVVPTPFKGNHEPDISYVEAATRAVV FT PFLKEGDLYVIESTSPVGTTDKMKDLIFSLRPELKEKIYIAYCPERVLPGNVIHELVHN FT DRVIGGMNKESTDKAIEFYSQFVKGTLHRTNCKTAEMCKLTENSSRDVQIAFANELSVI FT CDKAGINVWELISLANKHPRVNILQPGCGVGGHCIAVDPYFITADFPIESQIIAKAREI FT NNYKAFWCAEKVENAMLKFELEHHHKPTIAMMGLAFKPDIDDLREAPAKYITTKVMQSC FT NNADILIVEPNVSEHKVFKLTDYKEAYAKADIVVFLVAHSVFKALPYVSDKVILDFCGI FT YKK" FT misc_feature 907150..907707 FT /note="Pfam match to entry PF03721 UDPG_MGDP_dh_N, FT UDP-glucose/GDP-mannose dehydrogenase family, NAD binding FT domain, score 244.9, E-value 9.3e-71" FT misc_feature 907207..907239 FT /note="PS00639 Eukaryotic thiol (cysteine) proteases FT histidine active site." FT misc_feature 907729..908001 FT /note="Pfam match to entry PF00984 UDPG_MGDP_dh, FT UDP-glucose/GDP-mannose dehydrogenase family, central FT domain, score 126.9, E-value 3.2e-35" FT misc_feature 908077..908352 FT /note="Pfam match to entry PF03720 UDPG_MGDP_dh_C, FT UDP-glucose/GDP-mannose dehydrogenase family, UDP binding FT domain, score 62.1, E-value 1.1e-15" FT CDS 908366..909526 FT /transl_table=11 FT /locus_tag="BF9343_0709" FT /old_locus_tag="BF0744" FT /product="putative UDP-GlcNAc 2-epimerase" FT /note="Similar to previously sequenced Bacteroides fragilis FT UDP-GlcNAc 2-epimerase MnaA SWALL:Q9RGJ8 (EMBL:AF125164) FT (384 aa) fasta scores: E(): 9.3e-120, 79.63% id in 383 aa, FT and to Bacteroides thetaiotaomicron UDP-N-acetylglucosamine FT 2-epimerase BT0601 SWALL:AAO75708 (EMBL:AE016928) (403 aa) FT fasta scores: E(): 2.7e-108, 76.1% id in 385 aa, and to FT Bacteroides thetaiotaomicron putative FT UDP-N-acetylglucosamine 2-epimerase BT2944 SWALL:AAO78050 FT (EMBL:AE016938) (376 aa) fasta scores: E(): 3.3e-89, 62.3% FT id in 382 aa" FT /db_xref="GOA:Q5LH94" FT /db_xref="InterPro:IPR003331" FT /db_xref="UniProtKB/TrEMBL:Q5LH94" FT /protein_id="CAH06490.1" FT /translation="MKKVMLVFGTRPEAIKMAPLVKEFQMHPDQFQTLVCVTGQHREML FT DQVLSIFAIEPDFDLNIMKQGQDLYDVTARVLLGLRDVFKEVHPDIVLVHGDTSTSTTA FT ALAAFYQQIPVGHVEAGLRTYDVYSPWPEEMNRQITGRIATYHFAPTSLSRQNLLGEGV FT KEDRILITGNTVIDALYWVVNKIKGNRELDAELEHVLKISGYDIHRLDNGKKLVLITGH FT RRENFGDGFISMCKAIKALTEKYPEVDFVYPMHLNPNVRKPIHEVFGDDLSTLDNMFFI FT EPLEYLSFVYLMEKATIVLTDSGGIQEEAPGLGKPVLVMRDTTERPEALEAGTVKLVGT FT DYDKIISEVSMLLDDTEYYEAMSKAVNPYGDGLACERIIEKLIKIE" FT misc_feature 908429..909514 FT /note="Pfam match to entry PF02350 Epimerase_2, FT UDP-N-acetylglucosamine 2-epimerase, score 562.6, E-value FT 2.2e-166" FT CDS 909624..909824 FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0710" FT /old_locus_tag="BF0745" FT /product="conserved hypothetical (fragment)" FT /note="Fragment. Similar to part of the previously FT sequenced Bacteroides fragilis hypothetical 22.1 kDa FT protein SWALL:Q8VSS7 (EMBL:AF366394) (193 aa) fasta scores: FT E(): 2.5e-07, 60.37% id in 53 aa" FT CDS complement(910129..911037) FT /transl_table=11 FT /locus_tag="BF9343_0711" FT /old_locus_tag="BF0746" FT /product="putative transposase_11 DDE family protein" FT /note="Similar to Lactococcus lactis transposase FT SWALL:Q48369 (EMBL:L34754) (296 aa) fasta scores: E(): FT 8e-05, 25.6% id in 250 aa, and to Lactococcus lactis FT putative IS-like element protein SWALL:Q53510 (EMBL:S77101) FT (296 aa) fasta scores: E(): 1.6e-06, 26.8% id in 250 aa, FT and to Lactococcus lactis, and Lactococcus lactis subsp. FT lactis bv. diacetylactis putative transposase SWALL:O87349 FT (EMBL:AF051563) (296 aa) fasta scores: E(): 2.9e-06, 26.4% FT id in 250 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LH93" FT /protein_id="CAH06492.1" FT /translation="MIPKEKELKLIKIYMYICDIYQSSLKFYCQRFSNNANPIFTDEEL FT LTVYLFCRAYQRYFNIKEIHTFTKEYLLSWFPNLPSYQTFNYRLNLMNEAISELVKHLI FT TFFKPADCDSMTSLIDSMPIITCAGKNKTGKVATEIATKGYCSTKNMYYFGIKLHALAF FT RREGTIPFPEMIILSSAEENDLTVLKREAADCIINRDIFADKIYSDFSFWGNKQQEQGL FT SMLTPVKAIKGEQPVITQREKAGRDLFSTAVSKVRQPIELFFNWLNEKTNIQRAMKVRS FT TSGLLVHTMGKIAIAFIYLIF" FT misc_feature complement(910144..910695) FT /note="Pfam match to entry PF01609 Transposase_11, FT Transposase DDE domain, score 4.0, E-value 0.0013" FT CDS 911320..913194 FT /transl_table=11 FT /locus_tag="BF9343_0712" FT /old_locus_tag="BF0747" FT /product="conserved hypothetical protein" FT /note="Similar to Acinetobacter lwoffii emulsan FT biosynthesis WeeF protein SWALL:Q9RMC9 (EMBL:AJ243431) (604 FT aa) fasta scores: E(): 5.6e-43, 28.88% id in 630 aa, and to FT Pseudomonas aeruginosa ORF_12 of O-antigen biosynthetic FT locus SWALL:Q8KN79 (EMBL:AF498414) (614 aa) fasta scores: FT E(): 1e-42, 31.34% id in 469 aa, and to Ralstonia FT solanacearum hypothetical protein RSP1010 or RS02344 FT SWALL:Q8XR51 (EMBL:AL646082) (612 aa) fasta scores: E(): FT 6.1e-36, 28.54% id in 466 aa" FT /db_xref="InterPro:IPR008929" FT /db_xref="InterPro:IPR012480" FT /db_xref="UniProtKB/TrEMBL:Q5LH92" FT /protein_id="CAH06493.1" FT /translation="MNIFSLYFQILCDMGAKYFLFRISYEIQRKSGLLRFRYPVNYASQ FT NFFSLEEWKEKAMPFFFDSSKEVSLSNVHTYDLASDFQRVIKGECYFFSSKWYNLGADY FT DWVTNPDTNYKYDVSKHWTEVEDIVQEAGDIKYVWEKSRFSYLYTVIRYDHSTGEDHSQ FT FVFNQIQDWIDKNPLNCGPNYKCSQEISLRVLNWIFALYYYKSSPFLTESCFQKIINSI FT YWQIKHVYGNISFSRIAVRNNHAITETLTLYVVGLLFPWFPDAKLWKAKGKKWFEKEIE FT YQIAEDGTYLQFSMNYHRVVIQLLTWGIALAERNGECFNKHVYQRAYQSVNFLYQCQEL FT SNGYLPNYGSNDGALFFKLNDSDYRDYRPQLDALHYLLTGENLYDDVYEDRGWYANNWD FT CIHVEFTPLRQKMGCVSFDIGGYYLIREQDTLTFIRCGKYKDRPAHADNLHMDVWHKGE FT NILMDGGSYKYNTDASDINYFMGTQSHNTIMLDNNNQMLKGARFIWFYWSQALKASIQE FT LDESYCFLGVVSCFRQLGQDITHSRKIIKKKNDPKWVVEDIVLNKPQGSKIHQLWHTQS FT SRIDFKSVGHHNISSKGMYSEYYGQKKENKEIEFISNSESITTIIQVI" FT CDS 913196..914413 FT /transl_table=11 FT /locus_tag="BF9343_0713" FT /old_locus_tag="BF0748" FT /product="putative glycosyltransferase protein" FT /note="Similar to Nostoc punctiforme lipopolysaccharide FT biosynthesis protein SWALL:Q93LM6 (EMBL:AY037293) (440 aa) FT fasta scores: E(): 3.3e-20, 26.11% id in 402 aa, and to FT Acinetobacter lwoffii putative glycosyltransferase WeeG FT SWALL:Q9RMC8 (EMBL:AJ243431) (403 aa) fasta scores: E(): FT 1e-85, 54.66% id in 397 aa, and to Pseudomonas aeruginosa FT similar to glycosyl transferases group 1 SWALL:Q8KH36 FT (EMBL:AF498407) (405 aa) fasta scores: E(): 1.6e-81, 54.2% FT id in 404 aa" FT /db_xref="GOA:Q5LH91" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q5LH91" FT /protein_id="CAH06494.1" FT /translation="MKVLYFHQHFTVPTQAGGTRSYELAKRLVERGHSVCMVCGETAKL FT DLPRTQIKNVHRGMVDGIDVIQIALPYSNKDGIAKRALTFIKFGWKGVQIALKEEYDLL FT FATSTPLTAGIPGIVMKLFRKKKFIFEVRDLWPELPKALGIKNPFLLWGMSLLEWMSYH FT YSDACVGLSPGICEGIRKRSQSDKRIAMIPNGCDLDIFKPAPRELLKLKGIKPTDKVAV FT FTGAHGIANGLDAILDAANELKNRGRSDIVLAFIGDGKMKPHLMDRVKREKLDSCRFYD FT PMPKKELNTIVASADVGLMVLANVPAFYYGTSPNKFFDYISSGLAVLNNYPGWLADMIK FT KNDLGVVVPPNNAQAFANGLIKLVDDDNYRMNAGQNARKFAEANFSRIKLADDFVSFLE FT EIFSTD" FT misc_feature 913805..914335 FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 43.7, E-value 3.6e-10" FT CDS 914432..915040 FT /transl_table=11 FT /locus_tag="BF9343_0714" FT /old_locus_tag="BF0749" FT /product="putative UDP-galactose phosphate transferase" FT /note="Similar to Campylobacter jejuni UDP-galactose FT phosphate transferase homolog SWALL:Q9S5Y5 (EMBL:AF001498) FT (200 aa) fasta scores: E(): 4.6e-46, 60.89% id in 202 aa, FT and to Bacteroides fragilis putative undecaprenyl-phosphate FT glycosyl-1-phosphate transferase WcgN SWALL:Q9RGI8 FT (EMBL:AF125164) (202 aa) fasta scores: E(): 1.7e-70, 82.67% FT id in 202 aa, and to Oceanobacillus iheyensis UDP-galactose FT phosphate transferase ob2892 SWALL:Q8EMF5 (EMBL:AP004602) FT (215 aa) fasta scores: E(): 3.5e-47, 57.71% id in 201 aa" FT /db_xref="GOA:Q5LH90" FT /db_xref="InterPro:IPR003362" FT /db_xref="UniProtKB/TrEMBL:Q5LH90" FT /protein_id="CAH06495.1" FT /translation="MYRSFLKRVIDFSLVFCTLVICCPILFIIVFWLYFANKGAGVFFL FT QNRPGRDGKIFKVIKFKTMTDERDSKGCLLPDAQRLTKVGKFVRSTSIDELPQLINVLK FT GDMALIGPRPLLPQYLLLYSKEQARRHEVRPGITGWAQVNGRNAISWTKKFELDVWYVD FT HCSFLLDLKIFFLTIKKVFVREGISSDTSVTMEPFTGNN" FT misc_feature 914450..914995 FT /note="Pfam match to entry PF02397 Bact_transf, Bacterial FT sugar transferase, score 150.0, E-value 3.6e-42" FT misc_feature 914465..914533 FT /note="1 probable transmembrane helix predicted for BF0749 FT by TMHMM2.0 at aa 12-34" FT CDS 915045..915629 FT /transl_table=11 FT /locus_tag="BF9343_0715" FT /old_locus_tag="BF0750" FT /product="putative acetyltransferase" FT /note="Similar to Legionella pneumophila putative acetyl FT transferase SWALL:Q9RDX7 (EMBL:AJ007311) (419 aa) fasta FT scores: E(): 4.5e-16, 39.17% id in 194 aa, and to FT previously sequenced Bacteroides fragilis putative FT acetyltransferase WcgO SWALL:Q9RGI7 (EMBL:AF125164) (194 FT aa) fasta scores: E(): 4.7e-70, 96.9% id in 194 aa, and to FT Bacillus subtilis hypothetical protein YvfD SWALL:P71063 FT (EMBL:Z71928) (216 aa) fasta scores: E(): 7.7e-24, 43.41% FT id in 205 aa" FT /db_xref="GOA:Q5LH89" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR018357" FT /db_xref="InterPro:IPR020019" FT /db_xref="UniProtKB/TrEMBL:Q5LH89" FT /protein_id="CAH06496.1" FT /translation="MYLYGASGHAKVIIDILRAGHESIEALFDDNVEVTSLLGHPVLRP FT SEVRGPLIVSIGNNRIRKRIVDTLSVEFGCAIHPLSIVSELADIGEGSVVMQGSIIQVC FT AQVGRHCIINTGASVDHECVIEDYVHISPHSTLCGNVSVGEGSWIGAGTTVIPGVKIGK FT WSVIGAGSVVTKDIPDRVLAVGNRCEIIKSI" FT misc_feature 915354..915407 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 8.1, E-value FT 6.2" FT misc_feature 915408..915461 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 9.9, E-value FT 3.7" FT misc_feature 915462..915515 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 10.5, FT E-value 3.1" FT misc_feature 915489..915575 FT /note="PS00101 Hexapeptide-repeat containing-transferases FT signature." FT misc_feature 915516..915569 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 12.9, FT E-value 0.66" FT CDS complement(915822..916433) FT /transl_table=11 FT /locus_tag="BF9343_0716" FT /old_locus_tag="BF0751" FT /product="putative FIC family protein" FT /note="Similar to Haemophilus aegyptius hypothetical FT protein bpl02 SWALL:Q8VRE7 (EMBL:AF447808) (311 aa) fasta FT scores: E(): 1.2e-08, 30% id in 200 aa, and to Xylella FT fastidiosa cell filamentation protein xf1657 SWALL:Q9PCU8 FT (EMBL:AE003992) (203 aa) fasta scores: E(): 7.5e-08, 29.16% FT id in 192 aa, and to Shewanella oneidensis cell FT filamentation protein fic fic or so0913 SWALL:Q8EID0 FT (EMBL:AE015536) (197 aa) fasta scores: E(): 1.3e-07, 30.43% FT id in 161 aa" FT /db_xref="InterPro:IPR003812" FT /db_xref="UniProtKB/TrEMBL:Q5LH88" FT /protein_id="CAH06497.1" FT /translation="MSKYDTRENESETLPNLQNLSNAEDIAIAELEGFMFSELFLENEL FT TEKTKFNVAYICKIHKLAFQDLYSFAGKYRTVNISKGGFVFPAALYIPQSMQSLEKEIL FT SELPDRYNNQKQLIKDIAKVHAELLFIHPFREGNGRTARILANLMAIKQGYPRLNFSAF FT TNRQFPLYIEAVQKAAELNYTYMERIIEKCFEDETEPSEK" FT misc_feature complement(915873..916268) FT /note="Pfam match to entry PF02661 Fic, Fic protein family, FT score 103.9, E-value 2.7e-28" FT CDS 916521..917654 FT /transl_table=11 FT /locus_tag="BF9343_0717" FT /old_locus_tag="BF0752" FT /product="putative DegT/DnrJ/EryC1/StrS family FT aminotransferase protein" FT /note="Similar to Campylobacter jejuni lipopolysaccharide FT biosynthesis WlaK protein SWALL:O86158 (EMBL:Y11648) (386 FT aa) fasta scores: E(): 2.3e-44, 43.76% id in 393 aa, and to FT Bacteroides fragilis putative aminotransferase WcgP FT SWALL:Q9RGI6 (EMBL:AF125164) (376 aa) fasta scores: E(): FT 6e-143, 93.06% id in 375 aa, and to Oceanobacillus FT iheyensis aminotransferase ob2893 SWALL:Q8EMF4 FT (EMBL:AP004602) (371 aa) fasta scores: E(): 8.4e-69, 49.73% FT id in 380 aa" FT /db_xref="GOA:Q5LH87" FT /db_xref="InterPro:IPR000653" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q5LH87" FT /protein_id="CAH06498.1" FT /translation="MNKRIWLSLAHMGGREQDFIKEAFDTNWVVPLGPNVDAFEQSLVE FT YLHEDRRVVALSAGTAALHLGLILLDVKPGDEVICQSFTFAASANPISYLEAKPVFVDS FT EKDTWNMDPVLLEEAIKDRLRKTGKLPKAIIPVHLYGMPAKMDEIMEIAGRYGIPVLED FT AAEALGAELNGRKCGTFGELAALSFNGNKMITTSGGGALICRTEEEARQTKFYATQARD FT AAPHYQHTHIGYNYRMSNICAGIGRGQMFVLDEHVARRRAIHTLYTELLKDVPGITVLQ FT NPDGRFDSNFWLTCILVDPSVAGKTREDIRLKLDAENIETRPLWKPMHLQPVFVDAPFY FT GNGTSEHLFDIGLCLPSGPTLTDEDIKRVVDTIRQDM" FT misc_feature 916548..917642 FT /note="Pfam match to entry PF01041 DegT_DnrJ_EryC1, FT DegT/DnrJ/EryC1/StrS aminotransferase family, score 382.3, FT E-value 4.2e-112" FT CDS 917686..917856 FT /transl_table=11 FT /locus_tag="BF9343_0718" FT /old_locus_tag="BF0753" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="GOA:Q5LH86" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:Q5LH86" FT /protein_id="CAH06499.1" FT /translation="MLPLLYHIGYKSGSLLLYLCPNRYNMENQTIAEYVKQMRRETGLT FT QVDLSEKVGVD" FT CDS 918036..918515 FT /transl_table=11 FT /locus_tag="BF9343_0719" FT /old_locus_tag="BF0754" FT /product="putative non-specific DNA binding protein" FT /note="Similar to previously sequenced Bacteroides fragilis FT hypothetical 17.0 kDa protein ORF8 SWALL:Q9F747 FT (EMBL:AF285774) (157 aa) fasta scores: E(): 1.6e-43, 74.84% FT id in 159 aa, and to Bacteroides thetaiotaomicron conserved FT hypothetical protein, putative non-specific DNA-binding FT protein BT2021 SWALL:AAO77128 (EMBL:AE016934) (175 aa) FT fasta scores: E(): 5.4e-26, 50.57% id in 174 aa, and to FT Bacteroides thetaiotaomicron putative non-specific FT DNA-binding protein BT3199 SWALL:AAO78305 (EMBL:AE016939) FT (168 aa) fasta scores: E(): 3e-13, 36.68% id in 169 aa" FT /db_xref="GOA:Q5LH85" FT /db_xref="InterPro:IPR000119" FT /db_xref="InterPro:IPR005902" FT /db_xref="InterPro:IPR010992" FT /db_xref="InterPro:IPR023630" FT /db_xref="UniProtKB/TrEMBL:Q5LH85" FT /protein_id="CAH06500.1" FT /translation="MTLFYRAVQSTMATKAGDKKWHLNLVKIGKTVSTQQLAEMIAEKS FT SLTPGDVHNVVRNLMTAMRSELLNSKTVRLEGLGTFTMKARSRGRGVDKEEDVNPNQVG FT ALLCHFTPKYTRPAAIGTTRALLQGVEFQKIGSIGTSGGHDSGNGDGDIVDDPTA" FT misc_feature 918129..918293 FT /note="Pfam match to entry PF00216 Bac_DNA_binding, FT Bacterial DNA-binding protein, score 18.8, E-value 0.00019" FT CDS 918537..918629 FT /transl_table=11 FT /locus_tag="BF9343_0720" FT /old_locus_tag="BF0755" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LH84" FT /protein_id="CAH06501.1" FT /translation="MKKNSWNILLKVIIAVASAIAGVIGGQGLL" FT misc_feature 918537..918599 FT /note="Signal peptide predicted for BF0755 by SignalP 2.0 FT HMM (Signal peptide probability 0.892) with cleavage site FT probability 0.728 between residues 21 and 22" FT misc_feature 918555..918623 FT /note="1 probable transmembrane helix predicted for BF0755 FT by TMHMM2.0 at aa 7-29" FT CDS 918777..920324 FT /transl_table=11 FT /locus_tag="BF9343_0721" FT /old_locus_tag="BF0756" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT0374 SWALL:AAO75481 (EMBL:AE016927) FT (516 aa) fasta scores: E(): 1.1e-156, 72.95% id in 514 aa, FT and to previously sequenced Bacteroides fragilis FT hypothetical 61.2 kDa protein SWALL:Q9RGI4 (EMBL:AF125164) FT (519 aa) fasta scores: E(): 1.3e-153, 74.12% id in 514 aa, FT and to Bacteroides thetaiotaomicron conserved protein, with FT a weak D-galactarate dehydratase/altronate hydrolase domain FT BT1828 SWALL:AAO76935 (EMBL:AE016933) (520 aa) fasta FT scores: E(): 1.6e-145, 67.31% id in 514 aa" FT /db_xref="InterPro:IPR012547" FT /db_xref="InterPro:IPR018631" FT /db_xref="UniProtKB/TrEMBL:Q5LH83" FT /protein_id="CAH06502.1" FT /translation="MAKLYPIGIQNFEKIRREGYLYIDKTALVCRLVKTGSYYFLSRPR FT RFGKSLLISTLEAYFQGKKDLFRGLAMEELEKDWIKYPILHLDLNTEKYDTPESLDRIL FT NDTLAKWEMVYGTAPSETSIPLRFKGIVQRACEQSGQRVVILIDEYDKPMLQAIGNEEL FT GEKYRDTLKGFYSVLKTMDGYIRFALLTGVTKFGKVSVFSDLNNLNDISMDEPYVELCG FT ITEKEIHHYLEPEIRQLAKYQKMSYEDACRELKERYDGYHFTENSIGLYNPFSILNTFY FT KMKFGSYWFETGTPSYLVKLLLRDKYDLQQLAHDEATSDMLNCIDSTSKNPLPVIYQSG FT YLTIKGYDERFDIYRLGFPNREVEEGFIRYLLPFYANIDKGQTGFHITRFVSEVEQGDC FT DAFFRRLQSFFADTPYELVRDLELHYQNVLFIVYKLLGFYVQAEYHTSNGRIDMVLKTD FT RYIYVMEFKFDGSAEEALKQIEEKGYAAPFANDPRQLLKAGVNFSSKTRNIDCWVVD" FT CDS complement(920395..921396) FT /transl_table=11 FT /locus_tag="BF9343_0722" FT /old_locus_tag="BF0757" FT /product="putative aldo/keto-reductase" FT /note="Similar to Salmonella typhimurium putative FT oxidoreductase STM2406 SWALL:Q8ZNA1 (EMBL:AE008808) (332 FT aa) fasta scores: E(): 5.2e-73, 59.09% id in 330 aa, and to FT Salmonella typhi putative ion-channel protein STY2647 or FT T0451 SWALL:Q8Z4X6 (EMBL:AL627274) (332 aa) fasta scores: FT E(): 6e-73, 59.09% id in 330 aa, and to Salmonella typhi FT putative ion-channel protein STY2647 or T0451 FT SWALL:AAO68163 (EMBL:AL627274) (332 aa) fasta scores: E(): FT 6e-73, 59.09% id in 330 aa" FT /db_xref="GOA:Q5LH82" FT /db_xref="InterPro:IPR001395" FT /db_xref="InterPro:IPR005399" FT /db_xref="InterPro:IPR023210" FT /db_xref="UniProtKB/TrEMBL:Q5LH82" FT /protein_id="CAH06503.1" FT /translation="MINPIYSADKARYSGGMKYRRCGKSGILLPEVSLGLWHNFGDVDT FT LANSLRMAHFAFDKGITHFDLANNYGPSYGSAEETFGLIMKKSFMPYRDELFISTKAGH FT DMWEGPYGNWGSRKYLMSSLNQSLKRMNLEYVDIFYTHRYDPETPLEETLQALVDIVRQ FT GKALYIGISKYPKEKAEFAYRYLEERDVHCLLYQGRYNLFNREPEEQGILQQAKENGTG FT FIAFSPLAQGLLTNRYLNGIPEDSRIARGGFLKKEQLTEQVFNKIKALNEVAGSRGQTL FT AEMALAWVLKDDLVTSVIVGASSVKQLEDNLKVTENCKFSTDEIQRIGNILQ" FT misc_feature complement(920398..921330) FT /note="Pfam match to entry PF00248 aldo_ket_red, Aldo/keto FT reductase family, score 193.0, E-value 4e-55" FT CDS 921576..923744 FT /transl_table=11 FT /locus_tag="BF9343_0723" FT /old_locus_tag="BF0758" FT /product="putative glycosyl hydrolase" FT /note="Similar to Ruminococcus flavefaciens family 3 FT glycoside hydrolase XylA SWALL:Q9S307 (EMBL:AJ132472) (690 FT aa) fasta scores: E(): 9.4e-59, 38.06% id in 691 aa, and to FT Xanthomonas campestris glucan 1,4-beta-glucosidase XCC4106 FT SWALL:Q8P3G5 (EMBL:AE012534) (896 aa) fasta scores: E(): FT 3.7e-67, 35.97% id in 845 aa (with a large central FT deletion), and to Bacillus halodurans glucan FT 1,4-beta-glucosidase BH1908 SWALL:Q9KBL8 (EMBL:AP001513) FT (926 aa) fasta scores: E(): 7.8e-62, 35.89% id in 780 aa FT (with a large central deletion)" FT /db_xref="GOA:Q5LH81" FT /db_xref="InterPro:IPR001764" FT /db_xref="InterPro:IPR002772" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LH81" FT /protein_id="CAH06504.1" FT /translation="MKDMQTKIVMIGILLSTGIMLRAQDNGGCEDCPAFNAGGKVEVRG FT VKERIIGDLSQPVAVRVRTLIQQMTLAEKVAQLVSESDSIPRLNLPAYNYWNECLHGVA FT RAGEVTVFPQAINLASTWDTVLVKRVASAISTEARLKYLEIGKGLTYWSPTINMARDPR FT WGRNEETYGEDPHLTSRLGVAFVKGLQGDHPTYLKTVATIKHFVANNEENNRFSSSSQI FT PTKQLYEYYFPAYEACVKEANAQSVMTAYNAFNGVPPSGSHWLLDDVLRKEWGFDGFVV FT SDCGAIGVMNWQHRVVNSLEEAAALGVNSGCDLECGTTYKEKLVQAVEQGLISEAAIDR FT ALTRVLTARFKLGEFDPMELVPYNHYDKKLLAGKKFAELAYEAAVKSVVLLKNDALLPL FT NKEKIKSVAVVGPFADYNYLGGYSGQPPYSVSLLKGVKELIGKKGKVTYLNGMGTSADS FT IAQVVKGADIVLVALGSDEKMARENHDMPSIYLPEEQEKFLKKIYQVNPRIVLVFHTGN FT PLTSEWADTHILAIMQAWYPGQEAGRALANLLFGNENPSGKLPMTIYKTEEQLPDILDF FT DMWKGRTYRYMKGEPLYGFGHGLSYTSFEFDNIQGNDTLQPDAILQCSVELSNSGQLAG FT EEVVQVYVSRENTPVYTYPLKKLVAFKKVKLASGEKKKVDFTIAPRELSVWEDGKWRML FT SGKYTLFIGSGQPGLAKGITKGFEVKIR" FT misc_feature 921576..921644 FT /note="Signal peptide predicted for BF0758 by SignalP 2.0 FT HMM (Signal peptide probability 0.698) with cleavage site FT probability 0.686 between residues 23 and 24" FT misc_feature 921747..922568 FT /note="Pfam match to entry PF00933 Glyco_hydro_3, Glycosyl FT hydrolase family 3 N terminal domain, score 328.0, E-value FT 9.4e-96" FT misc_feature 922380..922433 FT /note="PS00775 Glycosyl hydrolases family 3 active site." FT misc_feature 922737..923384 FT /note="Pfam match to entry PF01915 Glyco_hydro_3_C, FT Glycosyl hydrolase family 3 C terminal domain, score 186.0, FT E-value 5.2e-53" FT CDS 924125..927262 FT /transl_table=11 FT /locus_tag="BF9343_0724" FT /old_locus_tag="BF0759" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides fragilis regulatory region FT FrrG SWALL:Q8VTA9 (EMBL:AF329100) (1137 aa) fasta scores: FT E(): 1.3e-95, 33.82% id in 1076 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT3103 SWALL:AAO78209 FT (EMBL:AE016939) (1061 aa) fasta scores: E(): 1.3e-98, FT 36.72% id in 1070 aa, and to Bacteroides thetaiotaomicron FT putative outer membrane protein, probably involved in FT nutrient binding BT1875 SWALL:AAO76982 (EMBL:AE016933) FT (1119 aa) fasta scores: E(): 1.5e-89, 33.89% id in 1065 aa" FT /db_xref="GOA:Q5LH80" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LH80" FT /protein_id="CAH06505.1" FT /translation="MKNMMLFLMALLMSGHMMAQQTIVTGVITDANDGSPLIGANVLVK FT GAGTGSIANVDGKYSVNVPNGKNVLVFSCVGYKEQEITLKPGQKVLNVTMKEDTELLDE FT VVVIGYGSMKKSDLTGSVTSIKSEDLMKTNPISINQGLQGRIAGVQVNQNDGAPGAGVS FT IQIRGANSFSTSTEPLYIVDGIPFTSSGMPGTGKDGMMQTANPLSTINPSDIESIEILK FT DASATAIYGSRGANGVVLITTKRGAKGKDNISFSANFGISKVVKKLDMLDGYAYAMYRN FT EAAQMFNEYENANEAIPYPGTSKVDPSTGESVYSPGPEDYRNGTYPSVNWQDEVFETAF FT SQEYNLSVNGSNDKGYYAISGNILDQSGIIHNSGYKRYSFRANLARKVHEWIEIGTNMS FT FTNSLNKLAKTNSVSDGIIRGALFYPATAPLDDETNNAQLNWFSSNPYVYTRAAKDELT FT TNSFFSSSFVEITPYKDLKVRQNVGFSYNINERDVYYNRETVEGKDPTNGYASKADNWS FT KNLVLETMATYNKTFNRNHSLNVVAAFSYERGDYGNKAMVATGFPQDLTEDFDMSAAVN FT PQKPTSGRGMTSLVSFLGRANYNLMNKYLFTASFRRDGSSKFAPGNKWSNFASGAIAWR FT ASEEQFIKDLNVFSNLKFRASYGQTGNQAIGAYATRDYLTVANYPINGALASGFANLTW FT RGPANPDLKWETTSQYNVGVDMGFFQNRINLTIDLYYKKTSDLLQNIQIPQSTGFSNMT FT TNFGNVTNKGLEITGKFYAITGKNLNWDFDANISFNRNKISGLPGDQFAQGWSKADNVF FT LQRNGMPIGTIYGFVEDGFYDNIAEVRADPFYAKESEAVCKAMVGEVKYKDFDGVAGIT FT NADRQVIGDTNPDFTFGMTHNFTYKNFSLSFFLQGCVGGDIFNANLLEVTMSGIGNIPQ FT NIYESRWTPENRENAKWPKAYAGYGRTMKLSDRYVEDGSYLRMKNINLGYKFISPFKGI FT ESINLFASVSNVFTISGYSWYDPDVNSFGSDASRRGVDLFSYPSSRTFSFGLQCTF" FT misc_feature 924125..924187 FT /note="Signal peptide predicted for BF0759 by SignalP 2.0 FT HMM (Signal peptide probability 0.994) with cleavage site FT probability 0.627 between residues 21 and 22" FT misc_feature 924470..927034 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 17.8, E-value 6.3e-05" FT CDS 927288..928955 FT /transl_table=11 FT /locus_tag="BF9343_0725" FT /old_locus_tag="BF0760" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides fragilis regulatory region FT FrrH SWALL:Q8VTA8 (EMBL:AF329100) (495 aa) fasta scores: FT E(): 4.5e-05, 23.29% id in 588 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT3331 SWALL:AAO78437 FT (EMBL:AE016940) (572 aa) fasta scores: E(): 3.2e-25, 28.29% FT id in 576 aa, and to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT4659 SWALL:AAO79764 (EMBL:AE016946) (557 aa) FT fasta scores: E(): 6.6e-11, 25.62% id in 601 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LH79" FT /protein_id="CAH06506.1" FT /translation="MKKIIFKSFLLLWTVLLACSCNDLLDEKAYDFVSPEQLGDSESAA FT SQLVTGAYNTVITSFIAPGSYLYLTNMDCDYASGASWAFGNVGAGNPQGFWGIDHMWQG FT SYTLIHRANLGISKISAMSNLSQESKQDALAQLCFLKAWAYFNLVRNYGPVPIFRKSIS FT EGEAMSQPRASVSDVYAHIIELLEQAEGMYSKDDAGFVVGHASNGAAKALLAKVYVTMA FT SGAMSGVPIVVKGGNPNIFEPQPITHIAKTVAGYESFDPAKYYALARDKAWEVINEYTL FT FDNYMDVWAIGNRNKGEHIWMAQAISGDKDFGNTICQDYVGIFKEDGTMEGNWYGMRDH FT WYLLFEEQDKRIVDGVIHRYASDGISNGKVIYNYYPRWYADKVENKEVYDSQGNAFDGT FT EVYHEGQGWTLAKLTKFTFVTDRKQKNSDFHFPLLRLPDIMLIYAEAVNELNGGPDAEA FT YNQVNRIRTRAHATPFSGMNQDEFRSAVLEERARELAYEADRRYDLFRWGIYLDVMNAI FT DMDEHNVTKRRLERNLLYPIPTSEVNSNDKIDSNNPGW" FT misc_feature 927288..927362 FT /note="Signal peptide predicted for BF0760 by SignalP 2.0 FT HMM (Signal peptide probability 0.989) with cleavage site FT probability 0.741 between residues 25 and 26" FT misc_feature 927312..927344 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 928991..930097 FT /transl_table=11 FT /locus_tag="BF9343_0726" FT /old_locus_tag="BF0761" FT /product="putative lipoprotein" FT /note="No significant database matches" FT /db_xref="InterPro:IPR002909" FT /db_xref="UniProtKB/TrEMBL:Q5LH78" FT /protein_id="CAH06507.1" FT /translation="MKTFRYILFVWVMLGCGLFASCEDDEVEYAPLAVTRVSTVLDREQ FT GIDQANLAQYIIVQGTGLNAVNSILVNDVQVDLKDAYITSGEITFPIPRVIPGEINNLI FT TLGSGNSTVTAPISVFIPELEVNGMFNEFTPAGDTMKVVGDYFDLYEITTESGQLFFGG FT KEVKITKSTGNSLSFVLPEDAVMGSKIKLVSPVCGEVTVPGKYMEKGNMLCDFDPFTGW FT GGSKYVIDGPVPAPYSGYFSRFKINKGDANDWDWNEVTTIAQCAVEYSPEVIADQNKYL FT LKFEVNTIKPLTKRQIRFYFSQINYDWEPFASGLALNTNGEWKTVSIDLGEMWKGDIPN FT DGVLQIMGNSWAEDTDICFDNFRIVPKD" FT misc_feature 928991..929053 FT /note="Signal peptide predicted for BF0761 by SignalP 2.0 FT HMM (Signal peptide probability 0.714) with cleavage site FT probability 0.438 between residues 21 and 22" FT misc_feature 929006..929038 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 930219..932012 FT /transl_table=11 FT /locus_tag="BF9343_0727" FT /old_locus_tag="BF0762" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LH77" FT /protein_id="CAH06508.1" FT /translation="MIMRKIQYLFIALFICLEIQAQDKFNIRGVLPWHNFLSGPTSWNL FT SDYRIYLDECRKNGINFIGFHNYTGGGERYATYVEPMIKIEYKNILPQACFDNSMTARW FT GYLPMAVKDFAFDTGKIFQLPVGAEAFGNNGSITSHSSREHYEKAQSLMRDVLKMAHER FT GIRMAMGFEFGVIPPEYFSLNVAGDCFYWAGESNMIPNPKSQIAAEIHYAAIDDILNTY FT PDIDYIWMWLNEHSFMGVDVQKALRDKPFARAYQENQALFKEAADSSARFVGVWALEYM FT KLTYKHLKSKGSRAKLILGGWGGGHQLPSLLKGLDRALPQDIIFSCLNPDLGKSPQPDF FT LEEIARNRSVWAVPWLEGDHQLWHFQPRVNMMREQVKLAAEQNLDGVIAIHWRTEEPRF FT NFRTFARFASDKGADESVDQLYDRYLTEEFGEEAAKEMTPLLARMDREQIQWNVPSPEF FT YAYTPEWGLLDENNVRIRQELVSSGESLLKKLRGEKRENLKRFIAMFRFELLLDEVDRA FT MMPAFILKKKEVQGEKINGSQEYMDAYRLLVSAPVKEMFDTYMERVHSRGELGVLSSLN FT QRVWREYNDLKIYLENKIKEK" FT misc_feature 930219..930281 FT /note="Signal peptide predicted for BF0762 by SignalP 2.0 FT HMM (Signal peptide probability 0.686) with cleavage site FT probability 0.668 between residues 21 and 22" FT CDS 932009..935224 FT /transl_table=11 FT /locus_tag="BF9343_0728" FT /old_locus_tag="BF0763" FT /product="putative secreted glucosidase" FT /note="Similar to carbohydrate binding module of Lysobacter FT enzymogenes beta-1,3-Glucanase C GluC SWALL:Q8GCZ5 FT (EMBL:AY157840) (383 aa) fasta scores: E(): 4.3e-07, 27.41% FT id in 259 aa, and to carbohydrate binding module of FT Clostridium acetobutylicum endo-1,4-beta-xylanase XynD FT B.subtilis ortholog cap0115 SWALL:Q97TI6 (EMBL:AE001438) FT (458 aa) fasta scores: E(): 6.2e-09, 28.18% id in 220 aa, FT and to carbohydrate binding module of Streptomyces FT coelicolor putative secreted glucosidase sco6665 or FT sc5a7.15C SWALL:O88021 (EMBL:AL939128) (466 aa) fasta FT scores: E(): 2.9e-06, 31.4% id in 121 aa" FT /db_xref="GOA:Q5LH76" FT /db_xref="InterPro:IPR005084" FT /db_xref="InterPro:IPR005154" FT /db_xref="InterPro:IPR008979" FT /db_xref="UniProtKB/TrEMBL:Q5LH76" FT /protein_id="CAH06509.1" FT /translation="MKRMAYHLLAILIWGMAASAVKAQILLTASATPIEEYAAVELQRY FT YYQLSGRLLSIDHEEVPDRKTEFVLTRLDHPLVKSWRDKGVLPLKSMPGEQGYVIRTVK FT EKGRELVVIAGVDANGLLYGVYGLLEDHLGMRFYMNGDVYPDKKEVQTRIPLIQDERTP FT TVAIRGFLPWTNFPQSATIYSWDDWRYIIDQAARMRMSFIMIHNYNGFCGHNELFHNFE FT YKGHLSRGWMPTIKTGHGWGCPGWNINEYLFGASEVYDDYDFGADYGLHNETLTNGQIK FT EKGATIFRKVIAYAHLRGVKIGLGLDIDVVLPEYQSEPDNKDLIKVQVAEIAREYPELD FT YLLCFQSEGQKNEAFYARWRRVFDGFYEEMKRKSPSTRIAVSGWGLTAESVNSLPEDVI FT CAPISYYSAAFEPGSVYGNREYWGCPWLERDFNSSEYYYPYNVDLSETIRAFGDASANM FT NGFYALTWRLADAISPKMWYISKAPWYNHEVLDSSEKVYRDFALANYGENAVDAITDII FT DQNEPFATDFGECQETPGFNQMVHTYPLMNLYSMTFGGKNGKDVEIKATGYAEKKGTKN FT APCDEGGECVGYIMADDWLQYPAVDFSNSPERMSIRIASASSGGVATVYLDRLGGPAIA FT RFEVKNTEGWQSWKSLTVPVKGLKGVHTLYVRFQPFNVIAKAGKLADKQLKTIDSCMAV FT TSDVLQQLRLSRLRARIHGAACHIALNTDFENYQWNDLPGKMDEWARSFLYRIEDISSY FT GNIMSTQNRFVKQNYVEKINQLRKQQRVQAPSHIIAKGTLEGAQISWRNEEPAVSSFVV FT CRNGEEIDTLASDVNCYQDKFHGAASYTVYAVDIEGHKSPLGIPADCLAGSADREAPVI FT VINSPLTSIMEGTPLHIRFSVVENRLPEFVSGIFHYRRTGEKVWKKIPFKHRTRGVFTL FT TLPASEITRQGIEYYISVSDSDNVFCYPGSAPARNHTVVVTEVPGDDKPEVPMIKPICG FT KRMFWSRVPNVEMYRIYRSRTPNFKIGADTFVTFVAGNTQSFADNGFDFDGTSLKGTYY FT YCVTSVSFWDHESEASKIIQIDY" FT misc_feature 932009..932077 FT /note="Signal peptide predicted for BF0763 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.654 between residues 23 and 24" FT misc_feature 932021..932089 FT /note="1 probable transmembrane helix predicted for BF0763 FT by TMHMM2.0 at aa 5-27" FT misc_feature 933698..934039 FT /note="Pfam match to entry PF03422 CBM_6, Carbohydrate FT binding module (family 6), score 66.2, E-value 6e-17" FT CDS 935224..936339 FT /transl_table=11 FT /locus_tag="BF9343_0729" FT /old_locus_tag="BF0764" FT /product="putative mannanase" FT /note="Similar to Pseudomonas fluorescens mannan FT endo-1,4-beta-mannosidase precursor ManA SWALL:MANA_PSEFL FT (SWALL:P49424) (419 aa) fasta scores: E(): 3.9e-34, 31.08% FT id in 386 aa, and to Cellulomonas fimi Man26A SWALL:Q9XCV5 FT (EMBL:AF126471) (1010 aa) fasta scores: E(): 9.3e-36, FT 37.22% id in 360 aa, and to Pseudomonas fluorescens mannan FT endo-1,4-beta-mannosidase precursor ManA SWALL:CAA57670 FT (EMBL:X82179) (423 aa) fasta scores: E(): 4e-34, 31.94% id FT in 360 aa. Note: Also similar to BF0771 (375 aa) fasta FT scores: E(): 7.1e-42, 35.142% identity in 387 aa overlap" FT /db_xref="GOA:Q5LH75" FT /db_xref="InterPro:IPR000805" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR016714" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR022790" FT /db_xref="UniProtKB/TrEMBL:Q5LH75" FT /protein_id="CAH06510.1" FT /translation="MKRIGIYIVIVVCILSCISSRRNLLTETRLMLVDTRATEHTAALF FT YNLRQLTGKRVVYGQHNYEMDGFDSDSTRWRDEANRCDAYDVTGAYPALASFDFLHFTN FT PRSWETKELNYIQEKFHVAYNRGNVITFCWHYYSPVTGGNFYDTTQVVRHILPGGSYHA FT TFKADLKIIADFAHNAKGDDGELIPIIFRPWHEFDGNWFWWGKNHCSVEEFKKLYRFTV FT TYLRDSLEVHNFLYAFSPDCGFTTEAEYLERYPGDKYVDVVGMDNYWDFRPDGGDTSLV FT VLKARILTQYAQKHGKLSAITETGTQTRDSLWYTQLLSILRSEGVALNYVCTWSGFSPY FT KGHPAAADFCRFKRDTLVLFADEIPNFYTWH" FT misc_feature 935320..936312 FT /note="Pfam match to entry PF02156 Glyco_hydro_26, Glycosyl FT hydrolase family 26, score 99.7, E-value 4.8e-27" FT CDS 936463..937761 FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0730" FT /old_locus_tag="BF0765" FT /product="putative mannosidase (fragment)" FT /note="Fragment. Similar to Thermotoga maritima FT beta-mannosidase ManB SWALL:Q9RIK9 (EMBL:Y17980) (680 aa) FT fasta scores: E(): 1.6e-13, 27.55% id in 381 aa but FT truncated at the C-terminus, and to entire protein of FT Caulobacter crescentus mannanase, putative CC0801 FT SWALL:Q9AA10 (EMBL:AE005756) (442 aa) fasta scores: E(): FT 3e-71, 43.72% id in 430 aa, and to Thermotoga maritima FT endo-1,4-beta-mannosidase TM1227 SWALL:Q9X0V4 FT (EMBL:AE001779) (669 aa) fasta scores: E(): 1.6e-13, 27.82% FT id in 381 aa but truncated at the C-terminus" FT misc_feature 936463..936531 FT /note="Signal peptide predicted for BF0765 by SignalP 2.0 FT HMM (Signal peptide probability 0.995) with cleavage site FT probability 0.519 between residues 23 and 24" FT misc_feature 936484..936516 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 937761..940205 FT /transl_table=11 FT /locus_tag="BF9343_0731" FT /old_locus_tag="BF0766" FT /product="putative beta-glucosidase" FT /note="Similar to previously sequenced Bacteroides fragilis FT beta-glucosidase SWALL:O31356 (EMBL:AF006658) (764 aa) FT fasta scores: E(): 3.4e-90, 37.03% id in 756 aa, and to FT Bacteroides thetaiotaomicron periplasmic beta-glucosidase FT precursor, xylosidase/arabinosidase BT4714 SWALL:AAO79819 FT (EMBL:AE016946) (769 aa) fasta scores: E(): 1.3e-154, FT 54.46% id in 751 aa, and to Sulfolobus solfataricus FT beta-xylosidase SSO3032 SWALL:Q97UI4 (EMBL:AE006894) (754 FT aa) fasta scores: E(): 1.7e-108, 42.76% id in 760 aa" FT /db_xref="GOA:Q5LH74" FT /db_xref="InterPro:IPR001764" FT /db_xref="InterPro:IPR002772" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR019800" FT /db_xref="UniProtKB/TrEMBL:Q5LH74" FT /protein_id="CAH06512.1" FT /translation="MKMKLICFLMLSVFFIFPVRAKNTFGKKKDKVTRLHFYDLNKNGR FT MDTYENPSAPVEYRVEHLLSQMTLEEKVGQMLTSLGWPMYERVGEDIRLTPQLEKEIGE FT YHIGSLWGFMRADPWTQRTLHTGLNPSLAARASNRLQSYVIEHSRLGIPLFLAEECPHG FT HMAIGTTVFPTSIGQASTWNPELIRQMGRVIAIEASAQGAHIGYGPVLDLARDPRWSRV FT EETYGEDPYLNGVMGTALVRGFQGETLNDGKSVIATLKHFASYGWTEGGHNGGTAHIGE FT RELEEAIFPPFREAVGAGALSVMSSYNEIDGNPCTGSRYLLTDILKDRWQFKGFVVSDL FT YAVGGLREHGVAGNDYEAAIKAVNAGVDSDLGTNVYAEQLVAAVKRGDVAVATIDKAVR FT RILSLKFQMGLFDDPFVDEKQAVQLVASSEHTGLAREVARQSIVLLKNKDKLLPLKKDI FT RTLAVIGPNADNVYNMLGDYTAPQADGTVVTVLDGIRQKVSKETRVLYAKGCTVRDSSR FT TGFKDAIETARNADAVVMVMGGSSARDFSSEYEETGAAKVTINQISDMESGEGYDRATL FT HLMGRQLELLEEISRLGKPVVLVLIKGRPLLMEGAIQEAEAIVDAWYPGMQGGNAVADV FT LFGDYNPAGRLTLSVPRSVGQLPVYYNTRRKGNRSRYIEEPGTPRYPFGYGLSYTTFSY FT TDMKVQVTEGSDDCRVDVTVTIQNQGTADGDEVAQLYFRDDVSSFTTPAKQLRAFSRIH FT LKAGESREVTFTLDKKSLALYMQEGEWVVEPGRFTIMVGGSSEDIACRQAFEINRKYTF FT KM" FT misc_feature 937761..937823 FT /note="Signal peptide predicted for BF0766 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.993 between residues 21 and 22" FT misc_feature 937926..938921 FT /note="Pfam match to entry PF00933 Glyco_hydro_3, Glycosyl FT hydrolase family 3 N terminal domain, score 318.3, E-value FT 7.4e-93" FT misc_feature 939084..939833 FT /note="Pfam match to entry PF01915 Glyco_hydro_3_C, FT Glycosyl hydrolase family 3 C terminal domain, score 214.7, FT E-value 1.2e-61" FT CDS 940211..941464 FT /transl_table=11 FT /locus_tag="BF9343_0732" FT /old_locus_tag="BF0767" FT /product="possible methyltransferase" FT /note="Similar to Methylobacterium sp. CmuC protein FT SWALL:Q9X7G6 (EMBL:AJ011317) (378 aa) fasta scores: E(): FT 7.1e-05, 27.74% id in 155 aa, and limited similarity to FT Hyphomicrobium chloromethanicum methyltransferase CmuC FT SWALL:Q9APJ9 (EMBL:AF281259) (370 aa) fasta scores: E(): FT 0.00085, 24.03% id in 208 aa" FT /db_xref="GOA:Q5LH73" FT /db_xref="InterPro:IPR000257" FT /db_xref="UniProtKB/TrEMBL:Q5LH73" FT /protein_id="CAH06513.1" FT /translation="MNRSRDKVRCALNHQNAGSIPVDFGSTAVTGIHCRIVEALRNYYG FT LAPRPVKIVDAFQMLGEIDAELAEKIGVDCIGIGGPKDIFDLDTTRMHEQTTPWGQRVL FT VPEAMDLTPDMRGDVYVYAGGDQNYPPSAVMPKGCYFINAIERQQPIEEDRLDPEDNVE FT EFGLLTENDLAYYCAEADKAYQTGRAVVASFGGTALGDVAFVPGMGLKQPKGIRSVVEW FT YMSTAMRQDYLHQVFEKEIDIAIANYEKLWAALGDKIDVVLTCGTDFGSQESQFCSIDT FT FRELWLPHYRRMNDWIHQHTTWKIFKHSCGAIIPILPGLIEAGFDIINPVQINAKDMDS FT RRLKEEFGSQLTFWGGGVDTQKILPFGTPDEIRRHVMGQCEILGRDGGFVFNAVHNVQA FT NVPVDNVVAMFDALKDIS" FT CDS 941645..942295 FT /transl_table=11 FT /locus_tag="BF9343_0733" FT /old_locus_tag="BF0768" FT /product="putative B12-binding methyltransferase" FT /note="Similar to C-terminus of Bacteroides FT thetaiotaomicron trimethylamine corrinoid protein 2 BT0340 FT SWALL:AAO75447 (EMBL:AE016927) (602 aa) fasta scores: E(): FT 1e-46, 65.38% id in 208 aa, and to Rhizobium loti corrinoid FT methyltransferase protein Mlr1231 SWALL:Q98L10 FT (EMBL:AP002996) (238 aa) fasta scores: E(): 1.1e-27, 43.68% FT id in 206 aa, and to Methanosarcina barkeri dimethylamine FT corrinoid protein MtbC SWALL:MTBC_METBA (SWALL:O93657) (212 FT aa) fasta scores: E(): 1.4e-26, 46.86% id in 207 aa" FT /db_xref="GOA:Q5LH72" FT /db_xref="InterPro:IPR003759" FT /db_xref="InterPro:IPR006158" FT /db_xref="UniProtKB/TrEMBL:Q5LH72" FT /protein_id="CAH06514.1" FT /translation="MIKAMNNLNELYEAILAGKLEQAVSVTREAVAGGAAPQEIINEYM FT IKAMEAIGARFESGQVFVPNLLMSARAMRGALDILKPLMQGQVNSYIGRIVIGTVKGDL FT HDIGKNLVASMFEGCGFEVINLGVDVSSDKFISAALENKADIICMSALLTTTMNYMKEV FT IDALETSGLRGKVKVMVGGAPVSDAFAKSIGADAYTSNANAAVIMAKKLINAC" FT misc_feature 941648..941914 FT /note="Pfam match to entry PF02607 B12-binding_2, B12 FT binding domain, score 66.2, E-value 6.2e-17" FT misc_feature 941921..942274 FT /note="Pfam match to entry PF02310 B12-binding, B12 binding FT domain, score 121.3, E-value 1.5e-33" FT CDS 942298..943002 FT /transl_table=11 FT /locus_tag="BF9343_0734" FT /old_locus_tag="BF0769" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT0342 SWALL:AAO75449 (EMBL:AE016927) FT (257 aa) fasta scores: E(): 8.4e-21, 32.28% id in 254 aa, FT and to Clostridium tetani putative FT 5-methyltetrahydrofolate--homocysteine methyltransferase FT CTC01807 SWALL:AAO36331 (EMBL:AE015942) (226 aa) fasta FT scores: E(): 5.1e-06, 25.61% id in 203 aa" FT /db_xref="GOA:Q5LH71" FT /db_xref="InterPro:IPR004223" FT /db_xref="InterPro:IPR017342" FT /db_xref="UniProtKB/TrEMBL:Q5LH71" FT /protein_id="CAH06515.1" FT /translation="MPLVNSHIVEECLPFTSLRLDPEDINLSMGAGYVPDAEIQAISDA FT LETEIAGICTPRFLYALFDAEPAGTCEVGVNGISLKTGSVITPYLKDAAGYVLFVATAG FT YEFEAFQHRIGSQGDILREFLLDAYGSAIAEAVVREVCRKVESRMFPLGYGVSHPYSPG FT YCGWHVTQQQLLFSCLPEFPCGVRLSDSSLMSPIKSVSGIIAYGPCIVKRKYGCELCGK FT ADCYKNRNKLNR" FT CDS 943009..944013 FT /transl_table=11 FT /locus_tag="BF9343_0735" FT /old_locus_tag="BF0770" FT /product="putative methylcobamide:CoM methyltransferase" FT /note="Similar to Methanosarcina barkeri methylcobamide:CoM FT methyltransferase MtbA or CmtA SWALL:MTBA_METBA FT (SWALL:O30640) (338 aa) fasta scores: E(): 8.3e-17, 29.88% FT id in 261 aa, and to Bacteroides thetaiotaomicron FT methylcobamide:CoM methyltransferase MtbA BT0343 FT SWALL:AAO75450 (EMBL:AE016927) (338 aa) fasta scores: E(): FT 5e-79, 59.4% id in 335 aa, and to Methanosarcina mazei FT methylcobamide:com methyltransferase MtbA or Mm1439 FT SWALL:MTBA_METMA (SWALL:P58984) (338 aa) fasta scores: E(): FT 3.2e-18, 30.37% id in 270 aa" FT /db_xref="GOA:Q5LH70" FT /db_xref="InterPro:IPR000257" FT /db_xref="UniProtKB/TrEMBL:Q5LH70" FT /protein_id="CAH06516.1" FT /translation="MELSLYIKDKLVSGKRVAIPIMTHPGIELLGKQVSDAVTNGEIHY FT HAIRALNECFPQSAACTTIMDLTVEAEAFGARLSMSPNEVPSVCGRLLTGYADVEALQI FT PSVESGRMPQYLLADRLAAEGIDKPVLAGCIGPYSLAGRLYDMTEIMMAIYTEPDTVLL FT LLEKCTEFILRYCLAIKETGVAGVIMAEPAAGLLSNEDCQRYSSVYVKRIIDAVQDDSF FT AVILHNCGNTGHCTAAMLATGAKGYHFGNKADMITALRECPSDVWVMGNLDPVGVFRVL FT TPEDVFARTEELLTCTGEYANFIISTGCDTPPEVPFDNIQAFYLAVEKYNKGR" FT misc_feature 943093..943998 FT /note="Pfam match to entry PF01208 URO-D, Uroporphyrinogen FT decarboxylase (URO-D), score -43.1, E-value 1.1e-11" FT CDS 944105..945229 FT /transl_table=11 FT /gene="manA" FT /locus_tag="BF9343_0736" FT /old_locus_tag="BF0771" FT /product="putative mannosidase" FT /EC_number="3.2.1.78" FT /note="Similar to Pseudomonas fluorescens mannan FT endo-1,4-beta-mannosidase precursor ManA SWALL:MANA_PSEFL FT (SWALL:P49424) (419 aa) fasta scores: E(): 1.7e-30, 34.86% FT id in 370 aa, to Cellulomonas fimi Man26A SWALL:Q9XCV5 FT (EMBL:AF126471) (1010 aa) fasta scores: E(): 5.2e-31, FT 34.09% id in 396 aa, and to Pseudomonas fluorescens mannan FT endo-1,4-beta-mannosidase precursor ManA SWALL:CAA57670 FT (EMBL:X82179) (423 aa) fasta scores: E(): 1.7e-30, 33.65% FT id in 410 aa. Note: BF0764, (372 aa) fasta scores: E(): FT 1.6e-42, 35.401% identity in 387 aa overlap" FT /db_xref="GOA:Q5LH69" FT /db_xref="InterPro:IPR000805" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR016714" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR022790" FT /db_xref="UniProtKB/TrEMBL:Q5LH69" FT /protein_id="CAH06517.1" FT /translation="MIKRIKILATGALLLAGLGACSPSGKKTGADSTVDTLRTAETVNL FT LNNLRKVPTQGIMFGHHDDPLYGVGWEGDEDRSDVKSVCGDYPAVMSFDLGHIELEREK FT SLDNVPFRKIRQETINQYKRGGVVSFSWHLDNPLTGKDAWDVSDTTVVASILPGGVHHA FT KFISWLDAVAAFMNTLETEEGTKIPVIFRPWHEHTGSWFWWGQNLCTADQYKALWRMTH FT DRMHARGVKNLLYAYSPGSEPKDSTAYLERYPGDDIIDLVGFDTYQFDRTQYMEQLDKS FT LAILTEVGKAHDKPIAITETGFEAIPDSVWWTQTLYPVISKYPISYVLVWRNARERVNH FT YYAPYPGQVSADDFVKFYREPKTLFVSDVKNLYK" FT misc_feature 944105..944182 FT /note="Signal peptide predicted for BF0771 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.464 between residues 26 and 27" FT misc_feature 944135..944167 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature 944204..945115 FT /note="Pfam match to entry PF02156 Glyco_hydro_26, Glycosyl FT hydrolase family 26, score 114.4, E-value 1.9e-31" FT CDS 945266..946438 FT /transl_table=11 FT /locus_tag="BF9343_0737" FT /old_locus_tag="BF0772" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3028 SWALL:AAO78134 (EMBL:AE016938) FT (396 aa) fasta scores: E(): 1.5e-122, 72.56% id in 390 aa, FT and to Thermotoga maritima hypothetical protein Tm1225 FT SWALL:Q9X0V2 (EMBL:AE001779) (326 aa) fasta scores: E(): FT 8.5e-16, 30.06% id in 326 aa, and to Methanosarcina FT acetivorans hypothetical protein Ma2382 SWALL:Q8TNB1 FT (EMBL:AE010928) (335 aa) fasta scores: E(): 1.1e-14, 30.03% FT id in 333 aa" FT /db_xref="InterPro:IPR007184" FT /db_xref="InterPro:IPR023296" FT /db_xref="UniProtKB/TrEMBL:Q5LH68" FT /protein_id="CAH06518.1" FT /translation="MSLFNDKVAKLLAGHEALLMRKNEPVEEGNGVITRYRYPVLTAAH FT TPVFWRYDLNEETNPFLMERIGMNATLNAGAIKWDGKYLMLVRVEGADRKSFFAVAESP FT NGIDNFRFWEYPVTLPEDVVPATNVYDMRLTAHEDGWIYGIFCAERHDDNAPIGDLSSA FT TATAGIARTKDLKNWERLPDLKTKSQQRNVVLHPEFVDGKYALYTRPQDGFIDTGSGGG FT IGWALIDDITHAEVGEEKIIDKRYYHTIKEVKNGEGPHPIKTPQGWLHLAHGVRNCAAG FT LRYVLYMYMTSLDDPTRLIASPAGYFMAPVGEERIGDVSNVLFSNGWIADDDGKVFIYY FT ASSDTRMHVATSTIERLVDYCLHTPQDGFSSSASVEILKNLIERNLRLMK" FT misc_feature 946019..946354 FT /note="Pfam match to entry PF04041 DUF377, Domain of FT unknown function (DUF377), score 45.2, E-value 5.9e-13" FT CDS 946455..947843 FT /transl_table=11 FT /locus_tag="BF9343_0738" FT /old_locus_tag="BF0773" FT /product="putative cation symporter" FT /note="Similar to Xanthomonas campestris cation symporter FT YnaJ or XCC4078 SWALL:Q8P3J3 (EMBL:AE012530) (460 aa) fasta FT scores: E(): 1.7e-42, 37.63% id in 457 aa, and to FT Escherichia coli O6 hypothetical symporter YicJ or C4490 FT SWALL:Q8FC70 (EMBL:AE016769) (479 aa) fasta scores: E(): FT 2e-40, 34.91% id in 464 aa, and to Salmonella typhi, and FT Salmonella typhimurium sodium:galactoside family symporter FT YicJ or t3769 or STM3750 or STY4043 SWALL:Q8XEW1 FT (EMBL:AE016846) (460 aa) fasta scores: E(): 3e-40, 33.69% FT id in 457 aa" FT /db_xref="GOA:Q5LH67" FT /db_xref="InterPro:IPR001927" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:Q5LH67" FT /protein_id="CAH06519.1" FT /translation="MTAMITLKEKIGYGLGDMASSMFWKLFGSYLMIFYTDVFGLPAAV FT VGTMFLITRVWDSAFDPIVGVIADRTQTRWGKFRPYLLYLAVPFALIGIFTFTTPELND FT TGKLVYAYITYSLMMMVYSAINVPYASLLGVMSPDPKERNTLSTYRMTFAYIGSFIALL FT LFMPMVNLFGGAEDEQRGWMLSVVVIAVMCAALFYLCFALTRERVKPIREVQNSLKDDL FT KDLLHNRPWWILLGAGVAALVFNSIRDGATVYYFKYFVVEEDYSTVSFFGVSFVLSGLY FT LAVGQAANIVGVILAAPVSNRIGKKNTYMGAMSLATLLSVIFYWFGKGDITLIFVFQVL FT ISICAGSIFPLLWSMYADCADYSELKTGNRATGLIFSSSSMSQKFGWAIGSALTGWLLA FT YFGFRANEVQSVEAIHGIKMFLSWLPAVGTVLSVVFISMYPLSEKKMREVTSELEKRRK FT AIQS" FT misc_feature order(946542..946610,946695..946754,946782..946850, FT 946911..946970,946998..947066,947127..947195, FT 947271..947339,947376..947435,947445..947513, FT 947607..947666,947709..947777) FT /note="11 probable transmembrane helices predicted for FT BF0773 by TMHMM2.0 at aa 30-52, 81-100, 110-132, 153-172, FT 182-204, 225-247, 273-295, 308-327, 331-353, 385-404 and FT 419-441" FT CDS 947856..949034 FT /transl_table=11 FT /locus_tag="BF9343_0739" FT /old_locus_tag="BF0774" FT /product="conserved hypothetical protein" FT /note="Similar to Rhizobium meliloti hypothetical protein FT ra0026 or SMA0058 SWALL:Q931B8 (EMBL:AE007197) (398 aa) FT fasta scores: E(): 7.2e-13, 23.68% id in 380 aa, and to FT Homo sapiens N-acylglucosamine 2-epimerase RenBP FT SWALL:RNBP_HUMAN (SWALL:P51606) (417 aa) fasta scores: E(): FT 1.4e-10, 24.44% id in 405 aa, and to Mus musculus FT renin-binding protein RenBP SWALL:AAO66340 (EMBL:AY183138) FT (419 aa) fasta scores: E(): 2.6e-10, 23.71% id in 409 aa, FT and to Bacteroides thetaiotaomicron N-acylglucosamine FT 2-epimerase BT3605 SWALL:AAO78710 (EMBL:AE016941) (388 aa) FT fasta scores: E(): 1.3e-07, 24.45% id in 409 aa" FT /db_xref="GOA:Q5LH66" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR010819" FT /db_xref="InterPro:IPR012341" FT /db_xref="UniProtKB/TrEMBL:Q5LH66" FT /protein_id="CAH06520.1" FT /translation="MDEILKQEMQKELTTRILPYWMERMVDQENGGFYGRITGQEELMP FT RADKGAILNARILWTYSAAYRLLGREEYKEMANRAKRYLIDHFYDSEFGGVYWSLNYRG FT EPLDTKKQIYAIGFAIYGLSEFHRATGDPEALMYAVRLFNDIESHSFDGLKNGYCEALT FT REWNEIADMRLSEKDANERKTMNTHLHILEPYTNLYRVWKDARLERQLYNLIGLFTEKI FT LDKDTSHLQLFFDNDWQSKYPVVSYGHDIEASWLLHEAARVLGDAGLIAEIEPVVKKIA FT AAASEGLTSDGGMIYEKNLTTGHIDGDYHWWVQAETVVGYYNLFRYFGDRGALQHSIDC FT WEFIKRHLTDDVHGEWFWSLRADGSLNRDDDKAGFWKCPYHNGRMCIELLGE" FT CDS 949140..950867 FT /transl_table=11 FT /locus_tag="BF9343_0740" FT /old_locus_tag="BF0775" FT /product="putative transmembrane protein" FT /note="Similar to Sulfolobus solfataricus amino acid FT transporter SSO1069 SWALL:Q97Z63 (EMBL:AE006725) blast FT scores: E(): 1.3, score: 37 22% id" FT /db_xref="GOA:Q5LH65" FT /db_xref="UniProtKB/TrEMBL:Q5LH65" FT /protein_id="CAH06521.1" FT /translation="MSILLGAGVFIFFGVYYSYHLHYQEQFQMFLFTSDYFVEQVSHPG FT GMADYLGGFLTQFYYYSWAGAAILTGAIGGIHRLMVWIANRLGGHPAWYPLTLLPSLCF FT FILFCDENFLLSGAISVGMVLGALIGYTFIENRRIRLIYWGVGIPLLYLLAGGCAWLFI FT PLIWITEFCRFAGRRLPWWILVGGTLGIAGVTYWISLAVFPYPADRLLWAIGSYRFPLV FT FPQMQVIAWLAVILVPLLVARLPEKMTWRYYSGAWVLQFILMLFVLNLYGKYGIGLNKE FT EVMGYDYHVRMQEWDEVIAMAEKKAPDTPMSVSCLNLALAMKGQLPERMFSFYQRGKEG FT LLMSFVNDFTIPLVAGEPYYYLGLVNVAQQFVFEAMEAVPDYRKSVRCFKRLAETNLIN FT GRYEVARKYLRILQHTLFYKDWATETLACLNDEDRVNAHPEYGRLRRLTPRTDFFFNPD FT LPEMTLEFLLHANPRNRMAYEYLMACTLLKKDVGRFVHYYPLGADLGYSSVPKGYQEAL FT LFYWLMSKHTATDTIPWKINPQTENRLREYAQIFTSARSADALSARFGDTYWFYADFR" FT misc_feature order(949143..949202,949299..949367,949404..949463, FT 949473..949541,949560..949628,949671..949739, FT 949794..949862,949905..949973) FT /note="8 probable transmembrane helices predicted for FT BF0775 by TMHMM2.0 at aa 2-21, 54-76, 89-108, 112-134, FT 141-163, 178-200, 219-241 and 256-278" FT CDS 950896..952329 FT /transl_table=11 FT /locus_tag="BF9343_0741" FT /old_locus_tag="BF0776" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="InterPro:IPR011042" FT /db_xref="InterPro:IPR011659" FT /db_xref="UniProtKB/TrEMBL:Q5LH64" FT /protein_id="CAH06522.1" FT /translation="MIGLLFLFAACQEKVTSPAKVDTLPSIFPDYVGVTIPSTIAPLNF FT RVTDDGVEAVDVVIAGTKGKPVRLNGRSVDIPAKQWHELLESNKGDSIEVKVSVRQGKK FT WKEYRPFPIYVSPFPIDYGLVYRLLAPGYEVYSKMGIYERELSTFRQTPLFENTQVTAA FT CINCHAFNRTEPTPSSVHVRGGHGATVIDTGDRLEFLDTKADGQLSACVYPYWHPSGEY FT IAYSVNKTNQAFHLGGKKPIEVFDQASDVVVYHPRSHRILTTPLLSTASFETFPAFSPD FT GRTLYFCSAEQKEMPVRYKDVKYSLCSIAFHPEDGTFGDRIDTLISARTLDKSISFPKP FT SFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGTYRNLEEVNSDDTESYHNWSSNSHW FT FVFSSRRGDGLYTRLYISSVDGQGRIGKPFLLPQQDPYTFYDQLIYSYNVPEFVSAPVQ FT WDKREMAKGLMSKERVKVK" FT misc_feature 951385..951402 FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT CDS 952333..953463 FT /transl_table=11 FT /locus_tag="BF9343_0742" FT /old_locus_tag="BF0777" FT /product="possible endoribonuclease" FT /note="Similar to Bacteroides thetaiotaomicron putative FT translation initiation inhibitor BT2475 SWALL:Q8A4X2 FT (EMBL:AE016936) (384 aa) fasta scores: E(): 2.3e-59, 54.01% FT id in 361 aa, and C-terminus is similar to Streptomyces FT avermitilis hypothetical protein sav75 SWALL:Q82RR8 FT (EMBL:AP005021) (129 aa) fasta scores: E(): 4.4e-07, 34.1% FT id in 129 aa" FT /db_xref="InterPro:IPR006175" FT /db_xref="InterPro:IPR013813" FT /db_xref="UniProtKB/TrEMBL:Q5LH63" FT /protein_id="CAH06523.1" FT /translation="MSKNMEYRKHRIEYLRTTVEYSLFGGEGGTREAHLMFHVDPEAGS FT YEEQLTAIRKAYHRILSRKVKIRGMVPVFCRYFLSDAANQWEALQVVLQKEPSCAVSVV FT QQPPLDGSKIALWVYLTSEPNAAYKHYWTAGAGVSCGKSERQMKTLLKSYEADLVGKGC FT TLASDCIRTWIFVQNVDVNYAGIVKARRENFLGQGLTESTHYIASTGIEGRHADPKIHV FT LFDAYAVKGLQPGQVTYLHALSHLSPTALYGVTFERGTSVEYGDRRHLFISGTASIDHR FT GEVVHVGDVREQTRRMWENVEKLLEEGKAGFEDVAQTIVYLRDASDYPVVRALFAKRFP FT DTPIQFVVAAVCRPAWLIEMECIAIVANSNSSYESF" FT misc_feature 952738..952761 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 953074..953430 FT /note="Pfam match to entry PF01042 ribonuc_L-PSP, FT Endoribonuclease L-PSP, score 49.5, E-value 6.4e-12" FT CDS 953450..953797 FT /transl_table=11 FT /locus_tag="BF9343_0743" FT /old_locus_tag="BF0778" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LH62" FT /protein_id="CAH06524.1" FT /translation="MNHSDRLYSIVLSKRYEMRCLTNSAFLFSGPSGRRKARQKDFLLR FT KAKVRGSESRDLMRIGRSFGEKKQAFTPKEVSVSRKCLLLFEISPNVFPDYSYCFRSEA FT QKWTESFRLLL" FT CDS complement(954068..955186) FT /transl_table=11 FT /locus_tag="BF9343_0744" FT /old_locus_tag="BF0779" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4056 SWALL:AAO79161 (EMBL:AE016943) FT (403 aa) fasta scores: E(): 1.5e-23, 32.08% id in 399 aa, FT and to Leptospira kirschneri serovar grippotyphosa outer FT membrane lipoprotein Lipl48 SWALL:Q8KWV1 (EMBL:AF394742) FT (461 aa) fasta scores: E(): 2.2e-23, 34.79% id in 273 aa, FT and to Leptospira interrogans hypothetical protein La3240 FT SWALL:Q8F196 (EMBL:AE011485) (511 aa) fasta scores: E(): FT 2.4e-23, 32.72% id in 327 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LH61" FT /protein_id="CAH06525.1" FT /translation="MTALVCLTGSSCTDDENNGQGNNIIYGENIIGNGEQTFEIKDHQY FT LKRGTYLMKGWCYVTYGSTLTIEAGTVIKGDKETRAALIVEPGGKLIARGTVDAPIVFT FT SEMPAGKRKPGDWGGLILCGYARNNEDIMQIEGGPRTMHGGPNNADNSGVLSYVRVEFA FT GYPFKKNQEINGITFGSVGNGTQIDHLQVSYANDDAFEWFGGTVHAEYLVAYHCWDDDF FT DIDNGYSGTCRHLLGIRHPRIADITGSHAFECSNNGTNTPATPTTAATFEDVTIYGPAS FT GDASFVNHPDFINGGGLRPENESMLGLFGAALYMGNNTSVTFRNCRISGYPSDMEGTPA FT SADNVVFSEREETGYPEWTQGWCNFNPQETEY" FT misc_feature complement(954239..954274) FT /note="PS00962 Ribosomal protein S2 signature 1." FT CDS complement(955289..956557) FT /transl_table=11 FT /locus_tag="BF9343_0745" FT /old_locus_tag="BF0780" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4056 SWALL:AAO79161 (EMBL:AE016943) FT (403 aa) fasta scores: E(): 6.5e-30, 37.61% id in 335 aa, FT and to Leptospira interrogans hypothetical protein La3240 FT SWALL:Q8F196 (EMBL:AE011485) (511 aa) fasta scores: E(): FT 9.5e-24, 30.96% id in 465 aa, and to Leptospira kirschneri FT serovar grippotyphosa outer membrane lipoprotein LIPl48 FT SWALL:Q8KWV1 (EMBL:AF394742) (461 aa) fasta scores: E(): FT 3.3e-22, 31.14% id in 427 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LH60" FT /protein_id="CAH06526.1" FT /translation="MKTNYLKLNSWAVAALMGMCSLAACSDDNSGEGGGNGDSEEVIAN FT NGTLKGSVDGSKTVILTKGYNFSLDGEYIVKAGSTLKIGEGVTISAKSDDATIDYILVE FT QGAKIEAVGTASAPIVMTADTKEPGAWGGIHICGKAPINIGSTGKSEVGDAAYGGSDPA FT DNSGILKYIRLEYAGYKFTTEKECNGFTFYGVGNGTTLEYLEAYKGTDDGFEWFGGTVN FT AKYLVSVSNSDDSFDWTEGWSGKGQFFVAYQEDPATLGYTCDCLIEADNYDKNMDAAPI FT SCPTLANLTLIGANNDEGKRGIRLRAGTQAKIYNALVTGKANNLTTETEQTEKFLIDGP FT SVLNYIAIAGDIKASGDGGYSSALFTAEGNHNAINQTLSFSNIFIGTQDGGADLSADSF FT FEKAAYKGAVKADNEWTKGWTKL" FT misc_feature complement(956480..956557) FT /note="Signal peptide predicted for BF0780 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.771 between residues 26 and 27" FT CDS complement(956632..959331) FT /transl_table=11 FT /locus_tag="BF9343_0746" FT /old_locus_tag="BF0781" FT /product="putative TonB-dependent receptor protein" FT /note="Similar to Bacteroides thetaiotaomicron FT TonB-dependent receptor BT4055 SWALL:AAO79160 FT (EMBL:AE016943) (904 aa) fasta scores: E(): 1.5e-44, 32.7% FT id in 908 aa, and to Leptospira interrogans tonb-dependent FT receptor La3242 SWALL:Q8F194 (EMBL:AE011485) (991 aa) fasta FT scores: E(): 6.8e-23, 26.37% id in 1001 aa, and to FT Shewanella oneidensis conserved hypothetical protein so2523 FT SWALL:Q8EE66 (EMBL:AE015694) (943 aa) fasta scores: E(): FT 7.4e-18, 20% id in 950 aa" FT /db_xref="GOA:Q5LH59" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="UniProtKB/TrEMBL:Q5LH59" FT /protein_id="CAH06527.1" FT /translation="MKQQIGRLLSTLLLATFSLGITAGVIQGTIIDKQTKEPLTGATVQ FT IAGTTTGTVADVDGNYTLTLSNGTYTIEVKYIGYKTLRMNEVKVKANATLNFELEVDAQ FT TLDAVTVVARKNLEGEKALLQERQKATLAIENMGAKEMTLKGISNVQDGVKKITGISIA FT SAGQLIVRGLGDRYSTTTLNGLPIASPNPDNKLIPLDLFPASTVKNITVSKVYAAGAFA FT DYSGAHIDISTKENTGSDFFSIGFNVGGRFNTVGKDFYYSDRKGGLFSTGNLRNKDRIL FT AMGKSEFRDYARNNDPFGTNFAISKHRSLPEFGGNLGGGKSWTLPNGNRLSVLASVGVS FT NENQILKDAYVTTMTAQGTHLDKFNYDSYSSALKIAGLGNIGYSFRQADHINFTVFYAR FT NAINDYMSREGIDAEKNNITSSNSVFHAYSLLNNQLLGHHELTSQWDVNWSASYGLTNS FT DEPDRRQVVFFRNEGSDKLNLFKLNQTTNRYFGELQEKEIVGDLRTSYKWGDANLIRVG FT GTYKSKKRDFESVNFYYDINALNADVTNIYDTNGYLNQENIANGTIKANIDAQPRYNYY FT AGMDVWAGFAEIEYYPMESLLVNVGLRYEQAKQWVRYWTDGGQEKKTNLDKGDFFPALN FT LKYSLNETNSLRLSVSRTVTRPSFIEMAPFLYQESYGSAYIRGNNELKNAYNYNIDLRY FT DFFPKRNNGDMFSVTGYFKKLKSPIEQTQESSGGTVIRSFRNAEDGIATGVEIEFRKEL FT FKNFRIGANGSYMYTNVVLPEGGVYTDSERALQGASPFLINADLSYTPQLRGESDLTLA FT LVYNVQGPRIETVGIYGTGNIKQQTLHTMDFIASYAINKHLSLRLQMKDLLNSTIRFKQ FT ELPATGQKVEVESFRPGTSAEIGVSYRF" FT misc_feature complement(956635..958950) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 69.2, E-value 7.6e-18" FT misc_feature complement(958366..958389) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(959263..959331) FT /note="Signal peptide predicted for BF0781 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.884 between residues 23 and 24" FT CDS 959599..962358 FT /transl_table=11 FT /locus_tag="BF9343_0747" FT /old_locus_tag="BF0782" FT /product="putative two-component system sensor histidine FT kinase" FT /note="Similar to Bacteroides thetaiotaomicron FT two-component system sensor histidine kinase BT4057 FT SWALL:Q8A0G4 (EMBL:AE016943) (921 aa) fasta scores: E(): 0, FT 69.11% id in 913 aa, and to Bacteroides thetaiotaomicron FT two-component system sensor histidine kinase BT1833 FT SWALL:Q8A6P4 (EMBL:AE016933) (882 aa) fasta scores: E(): FT 3.8e-131, 55.18% id in 810 aa, and to Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase BT0998 SWALL:Q8A919 (EMBL:AE016930) (810 aa) fasta FT scores: E(): 9.5e-105, 44.66% id in 918 aa" FT /db_xref="GOA:Q5LH58" FT /db_xref="InterPro:IPR000700" FT /db_xref="InterPro:IPR001610" FT /db_xref="InterPro:IPR003018" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR013655" FT /db_xref="UniProtKB/TrEMBL:Q5LH58" FT /protein_id="CAH06528.1" FT /translation="MASMAQLGWWEADFTAGHYVCSEYLCDLLGLEGNTISFTDFRKRV FT REDYQEQIVREFNASIHREFYEQTFPIHSKEGIVWLHTRLGEREEIPGRGVVSFGIMQR FT VEAPNDTSERVLERVNDLLYRQNSISHSLLRFLKDDSVDLCIMEILKDILDLFHGGRVY FT IFEYDEYYRYQDCTYEVVAEGVLPEIDSLQRIPTDSLPWWRQQTLSGKPVILDSLDQLP FT KHAKAEYAILSRQNIKSLMITPLIAGEHVWGYMGIDLVKNYRNWNNEDFQWLSSLANII FT SICIELRKAKDEAVRERSFLRNLFRFMPMGYIRMTMVRDAAGLPCDYRIADANDLSSEL FT IGMSLSDYVGCLASELHADFKAKVDYLLDVMEGSVHKETDVYFHRTQRSSHCIVYSPEK FT DEVVALFLDSTETIRAHRALDRSEKLFKNIFANIPAGVEIYDKDGNLLDLNNWDMETFG FT VKDKADVMGVNFFENPNVPLEIRERVRNEDLVDFRLNYSFNKASDYYHSDKSNIIELYT FT KVSKLFDSQGNFNGYVLINIDNTERIDAINRIRDFENFFLLISDYAKVGYAKLNLLSKR FT GYAIKQWFKNMGETEDIPLSSVVGVYDKMHPEDRQKVFDFYEKVLAGEEKDFRSEMRIL FT KPGATNEWNWVRMNVVVTKFEPEHGEVEIIGINYDITELKETEAMLIEAKEKAETMDRL FT KSAFLANMSHEIRTPLNAIVGFSGLLVDTEDMEERCEYIKIVQENNDLLLQLISDILDL FT SKIEAGTFEFTYGETDVNMLCEDIVRSSQIKVPQGIELVFDPHPSDCTVISDRNRLHQV FT ISNFVNNALKFTSSGSIHVGYEKKEEGVEFYVSDTGIGISKEQLTHIFERFVKLNSFIH FT GTGLGLSICKSIVEQLGGVIGVDSEEGKGARFWFTIPYINSEQSIVND" FT misc_feature 960019..960453 FT /note="Pfam match to entry PF01590 GAF, GAF domain, score FT 27.3, E-value 3.2e-05" FT misc_feature 961678..961875 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 88.7, E-value 1e-23" FT misc_feature 962008..962328 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 141.7, FT E-value 1.1e-39" FT CDS complement(962455..963906) FT /transl_table=11 FT /gene="nuoN" FT /locus_tag="BF9343_0748" FT /old_locus_tag="BF0783" FT /product="putative NADH dehydrogenase chain N" FT /note="Similar to Synechocystis sp NdhB gene SWALL:Q55269 FT (EMBL:D90288) (521 aa) fasta scores: E(): 1.3e-51, 34.76% FT id in 466 aa, and to Bacteroides thetaiotaomicron NADH FT dehydrogenase I, chain N BT4058 SWALL:AAO79163 FT (EMBL:AE016943) (480 aa) fasta scores: E(): 3.2e-149, FT 77.68% id in 484 aa, and to Rhizobium meliloti probable FT NADH dehydrogenase I chain N transmembrane protein NuoN or FT r01279 or SMC01927 SWALL:Q92QN9 (EMBL:AL591786) (480 aa) FT fasta scores: E(): 2.7e-55, 35.6% id in 469 aa" FT /db_xref="GOA:Q5LH57" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR010096" FT /db_xref="UniProtKB/TrEMBL:Q5LH57" FT /protein_id="CAH06529.1" FT /translation="MDYSQFLYMKEELSLIAVILILFVVDLLTCPDQKGATPKVNVRSL FT TLPAVILMTLHTVINLFPGTPAEAFGGMYQYTPMQTIIKAVLNVGTIIVLLMAHEWLKR FT EDTRIKQGEFYVLTLSTLLGMYFMISAGHFLMFFIGLEMASIPMAALVAFDKYRHHSAE FT AGAKYILTALFSSALLLFGLSMIYGTSGTLYFNDLPGHITGNMLQIMAFVFFFAGMGFK FT ISLVPFHLWTADVYEGAPTAVTSYLSVISKGSAAFVLMTILMKVFAPMVAQWQEVLFWV FT TIASITIANLFAIRQQNLKRFMAFSAISQAGYIMLGVIGGSEMGMTALVYYVLVYLAAN FT LGVFAVISIVEQRSNKVEIDDYNGLYKTNPKLAFIMTLALFSLAGIPPFAGFFSKFFIF FT MAAFNSGFHLLVFIALINTVVSLYYYLLIVKAMYINPNEEPIPTFRSDNYTKVSLVLCT FT LGIIALGIASCIYQGIDKFSFGMGM" FT misc_feature complement(order(962485..962553,962620..962688, FT 962731..962799,962857..962925,962938..963006, FT 963025..963078,963115..963183,963220..963288, FT 963346..963414,963475..963543,963601..963654, FT 963715..963774,963817..963870)) FT /note="13 probable transmembrane helices predicted for FT BF0783 by TMHMM2.0 at aa 13-30, 45-64, 85-102, 122-144, FT 165-187, 207-229, 242-264, 277-294, 301-323, 328-350, FT 370-392, 407-429 and 452-474" FT misc_feature complement(962656..963516) FT /note="Pfam match to entry PF00361 oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains, FT score 215.9, E-value 5.2e-62" FT CDS complement(963913..965397) FT /transl_table=11 FT /gene="nuoM" FT /locus_tag="BF9343_0749" FT /old_locus_tag="BF0784" FT /product="putative NADH-ubiquinone oxidoreductase subunit" FT /note="Similar to Rhizobium meliloti putative FT NADH-ubiquinone oxidoreductase subunit NuoM3 SWALL:Q9EV68 FT (EMBL:AJ245399) (491 aa) fasta scores: E(): 3.6e-54, 34.84% FT id in 485 aa, and to Bacteroides thetaiotaomicron NADH FT dehydrogenase I, chain M BT4059 SWALL:AAO79164 FT (EMBL:AE016943) (494 aa) fasta scores: E(): 1.5e-186, FT 94.13% id in 494 aa, and to Brucella suis NADH FT dehydrogenase I, M subunit NuoM or BR0814 SWALL:Q8G1A5 FT (EMBL:AE014385) (502 aa) fasta scores: E(): 1.2e-54, 34.54% FT id in 495 aa" FT /db_xref="GOA:Q5LH56" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="InterPro:IPR010227" FT /db_xref="UniProtKB/TrEMBL:Q5LH56" FT /protein_id="CAH06530.1" FT /translation="MNFLSLFVLIPLLMLGGLYLAKSIKAIRGVMVAGSTALLILSVVL FT TFLYLGERQAGATAEMLFRADTVWYAPLHIAYSVGVDGISVAMLLLSAVIVFTGTFASW FT KLQPLTKEYFLWFTLLSMGVFGFFISIDLFTMFMFYEIALIPMYLLIGVWGSGRKEYAA FT MKLTLMLMGGSAFLLIGILGIFFGAGGTTMNILEIAQLHNIPFAQQCIWFPLTFLGFGV FT LGALFPFHTWSPDGHASAPTAVSMLHAGVLMKLGGYGCFRIAMYLMPEAANELGWIFLI FT LTGISVVYGAFSACVQTDLKYINAYSSVSHCGLVLFAILMMNQTAATGAVLQMLSHGLM FT TALFFALIGMIYGRTHTRDVRELNGLMKVMPFLSVCYVIAGLANLGLPGLSGFVAEMTI FT FVGSFQNFDVFHRTLTIIACSSIVITAVYILRLVGKILYGTCTNKHHLALTDATWDERF FT AVICLIICVAGLGMAPFWVSHMIGESVLPVVSHLIP" FT misc_feature complement(order(963958..964026,964102..964170, FT 964213..964281,964339..964407,964435..964494, FT 964513..964572,964600..964668,964702..964770, FT 964828..964896,964933..964992,965005..965061, FT 965080..965148,965248..965316,965335..965388)) FT /note="14 probable transmembrane helices predicted for FT BF0784 by TMHMM2.0 at aa 4-21, 28-50, 84-106, 113-131, FT 136-155, 168-190, 210-232, 244-266, 276-295, 302-321, FT 331-353, 373-395, 410-432 and 458-480" FT misc_feature complement(964144..965010) FT /note="Pfam match to entry PF00361 oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains, FT score 236.5, E-value 3.3e-68" FT misc_feature complement(964462..964515) FT /note="PS00338 Somatotropin, prolactin and related hormones FT signature 2." FT misc_feature complement(964756..964821) FT /note="Predicted helix-turn-helix motif with score FT 1083.000, SD 2.88 at aa 193-214, sequence FT MNILEIAQLHNIPFAQQCIWFP" FT misc_feature complement(965335..965397) FT /note="Signal peptide predicted for BF0784 by SignalP 2.0 FT HMM (Signal peptide probability 0.859) with cleavage site FT probability 0.747 between residues 21 and 22" FT CDS complement(965410..967320) FT /transl_table=11 FT /gene="nuoL" FT /locus_tag="BF9343_0750" FT /old_locus_tag="BF0785" FT /product="putative NADH dehydrogenase chain L" FT /note="Similar to Bacteroides thetaiotaomicron NADH FT dehydrogenase I, chain L BT4060 SWALL:AAO79165 FT (EMBL:AE016943) (643 aa) fasta scores: E(): 0, 87.55% id in FT 643 aa, and to Synechococcus elongatus NADH dehydrogenase FT subunit 5 NdhF1 or tll0720 SWALL:Q8DKX9 (EMBL:AP005371) FT (656 aa) fasta scores: E(): 3e-81, 42% id in 669 aa, and to FT Nephroselmis olivacea subunit 5 of FT NADH-plastoquinoneoxidoreductase NdhF SWALL:Q9TKV7 FT (EMBL:AF137379) (648 aa) fasta scores: E(): 2.9e-80, 41.13% FT id in 654 aa" FT /db_xref="GOA:Q5LH55" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003945" FT /db_xref="InterPro:IPR018393" FT /db_xref="UniProtKB/TrEMBL:Q5LH55" FT /protein_id="CAH06531.1" FT /translation="MEYTILILLLPFLSFLALGIGGKWMSHRTAGTIGTLVLAAVTVLS FT YVTAVHYFSAPRLADGTFATLIPYNFEWLPFTETLTFNLGILLDPISVMMLIVISTVSL FT MVHIYSFGYMKGERGFQRYYAFLSLFTMSMLGLVVATNIFQMYLFWELVGVSSYLLIGF FT YYTRPAAIAASKKAFIVTRFADLGFLIGILIYGYYGGTFGFTPDTVSMLSGGAGMLPLA FT LGLMFVGGAGKSAMFPLHIWLPDAMEGPTPVSALIHAATMVVAGVYLVARMFPLFIEYA FT PDVLHLIGWVGAFTAFYAASVACVQSDIKRVLAFSTISQIGFMIVALGVCTSSDPHHGG FT LGYMAGMFHLFTHAMFKALLFLGAGSIIHAVHSNEMSAMGGLRKYMPITHITFLIACLA FT IAGIPPFSGFFSKDEILAACFQYSPTMGWVMTVIAAMTAFYMFRLYYGIFWGGTAPGQK FT STSDDTSHVHTPHESPLTMTVPLIFLAAVTCVAGFIPFGHFISSNGESYTIHLETSVAV FT TSVVIAVASIVLATCMYLRQQQPLADKLAKRFAGLHRAAYHRFYIDEVYQFITHRIIFR FT CISTPIAWFDRHVVDGFFNFIAWGTHATSDEIRGLQSGRVQQYAYVFLLGALILILILI FT L" FT misc_feature complement(order(965416..965469,965716..965775, FT 965818..965886,965980..966048,966091..966150, FT 966208..966276,966319..966387,966406..966471, FT 966499..966567,966625..966693,966721..966789, FT 966826..966879,966889..966948,966982..967050, FT 967156..967224,967243..967311)) FT /note="16 probable transmembrane helices predicted for FT BF0785 by TMHMM2.0 at aa 4-26, 33-55, 91-113, 125-144, FT 148-165, 178-200, 210-232, 252-274, 284-305, 312-334, FT 349-371, 391-410, 425-447, 479-501, 516-535 and 618-635" FT misc_feature complement(966019..966903) FT /note="Pfam match to entry PF00361 oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains, FT score 359.3, E-value 3.4e-105" FT misc_feature complement(966934..967122) FT /note="Pfam match to entry PF00662 oxidored_q1_N, FT NADH-Ubiquinone oxidoreductase (complex I), chain 5 FT N-terminus, score 68.0, E-value 1.7e-17" FT misc_feature complement(967204..967320) FT /note="Signal peptide predicted for BF0785 by SignalP 2.0 FT HMM (Signal peptide probability 0.904) with cleavage site FT probability 0.413 between residues 39 and 40" FT CDS complement(967357..967668) FT /transl_table=11 FT /gene="nuoK" FT /locus_tag="BF9343_0751" FT /old_locus_tag="BF0786" FT /product="putative NADH dehydrogenase chain K" FT /note="Similar to Bacteroides thetaiotaomicron NADH FT dehydrogenase I, chain K BT4061 SWALL:AAO79166 FT (EMBL:AE016943) (102 aa) fasta scores: E(): 3.7e-38, 95.09% FT id in 102 aa, and to Synechococcus sp. NADH dehydrogenase FT subunit E NdhE SWALL:Q8KX57 (EMBL:AF381034) (103 aa) fasta FT scores: E(): 3.7e-16, 42.71% id in 103 aa, and to FT Plectonema boryanum NAD(P)H-quinone oxidoreductase NdhE or FT Ndh4L SWALL:NULC_PLEBO (SWALL:Q00244) (101 aa) fasta FT scores: E(): 6.2e-15, 38.61% id in 101 aa" FT /db_xref="GOA:Q5LH54" FT /db_xref="InterPro:IPR001133" FT /db_xref="UniProtKB/TrEMBL:Q5LH54" FT /protein_id="CAH06532.1" FT /translation="MMIHMEYYLVVSTIMMFAGIYGFFTRRNTLAILISVELMLNATDI FT NFAVFNRFLFPGELEGYFFALFSIAISAAETAIAIAIMINIYRNIRSIQVKNLDELKW" FT misc_feature complement(967360..967650) FT /note="Pfam match to entry PF00420 oxidored_q2, FT NADH-ubiquinone/plastoquinone oxidoreductase chain 4L, FT score 90.4, E-value 3.1e-24" FT misc_feature complement(order(967417..967485,967597..967650)) FT /note="2 probable transmembrane helices predicted for FT BF0786 by TMHMM2.0 at aa 7-24 and 62-84" FT CDS complement(967675..968187) FT /transl_table=11 FT /gene="nuoJ" FT /gene_synonym="ndhG" FT /locus_tag="BF9343_0752" FT /old_locus_tag="BF0787" FT /product="putative NADH dehydrogenase chain J" FT /EC_number="1.6.5.-" FT /note="Similar to Synechocystis sp. NAD NdhG or sll0521 FT SWALL:NU6C_SYNY3 (SWALL:P26523) (198 aa) fasta scores: E(): FT 9.8e-10, 32.93% id in 167 aa, and to Bacteroides FT thetaiotaomicron NADH dehydrogenase I, chain J BT4062 FT SWALL:AAO79167 (EMBL:AE016943) (170 aa) fasta scores: E(): FT 7.1e-49, 81.17% id in 170 aa, and to Methanosarcina mazei FT f420h2 dehydrogenase subunit FpoJ SWALL:Q9P9F7 FT (EMBL:AF228525) (176 aa) fasta scores: E(): 2.4e-12, 35.67% FT id in 171 aa" FT /db_xref="GOA:Q5LH53" FT /db_xref="InterPro:IPR001457" FT /db_xref="UniProtKB/TrEMBL:Q5LH53" FT /protein_id="CAH06533.1" FT /translation="MGLTLETVVFYFLAVFIIAMSILTVTTQRIVRSATYLLFVLFGTA FT GIYFLLGYTFLGSVQIMVYAGGIVVLYVFSILLTSGEGDRAAHLKRSKFLAGLVTTIIG FT AILVLFITLTHKFVPTSDPEPVEISIKTIGHALLSSGKYGYVLPFEAVSILLLACIVGG FT LLIARKR" FT misc_feature complement(967684..968172) FT /note="Pfam match to entry PF00499 oxidored_q3, FT NADH-ubiquinone/plastoquinone oxidoreductase chain 6, score FT 11.6, E-value 7.4e-07" FT misc_feature complement(order(967687..967755,967849..967908, FT 967945..968013,968023..968091,968110..968178)) FT /note="5 probable transmembrane helices predicted for FT BF0787 by TMHMM2.0 at aa 4-26, 33-55, 59-81, 94-113 and FT 145-167" FT CDS complement(968194..968673) FT /transl_table=11 FT /gene="nuoI" FT /locus_tag="BF9343_0753" FT /old_locus_tag="BF0788" FT /product="putative NADH dehydrogenase I subunit I" FT /note="Similar to Pseudomonas fluorescens NADH FT dehydrogenase I subunit I NuoI SWALL:Q8RQ74 (EMBL:AF281148) FT (182 aa) fasta scores: E(): 3.3e-13, 36.42% id in 140 aa, FT and to Bacteroides thetaiotaomicron NADH dehydrogenase I, FT chain I BT4063 SWALL:AAO79168 (EMBL:AE016943) (162 aa) FT fasta scores: E(): 2.2e-55, 87.97% id in 158 aa, and to FT Pseudomonas syringae NADH dehydrogenase I, I subunit NuoI FT or PSPTO3372 SWALL:AAO56850 (EMBL:AE016868) (182 aa) fasta FT scores: E(): 1e-13, 37.14% id in 140 aa" FT /db_xref="GOA:Q5LH52" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR010226" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:Q5LH52" FT /protein_id="CAH06534.1" FT /translation="MKNEEYTYLGGLMQGIGSLLTGMKTTIKVYFRKKVTEQYPENRAE FT LKMFDRFRGTLNMPHNENNEHRCVACGLCQMACPNDTIKVTSETIETEEGKKKKILAKY FT EYDLGSCIFCQLCVNACPHDAITFDQVFEHAVFDRTKLVLQLNREGSKVIEKKKE" FT misc_feature complement(968293..968364) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 36.6, E-value 4.9e-08" FT misc_feature complement(968308..968343) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT misc_feature complement(968422..968493) FT /note="Pfam match to entry PF00037 fer4, 4Fe-4S binding FT domain, score 25.6, E-value 2.2e-05" FT misc_feature complement(968437..968472) FT /note="PS00198 4Fe-4S ferredoxins, iron-sulfur binding FT region signature." FT CDS complement(968690..969766) FT /transl_table=11 FT /gene="nuoH" FT /locus_tag="BF9343_0754" FT /old_locus_tag="BF0789" FT /product="putative NADH dehydrogenase subunit H" FT /note="Similar to Streptomyces coelicolor nuoh, NADH FT dehydrogenase subunit NuoH or sco4569 or scd16a.14C FT SWALL:Q9XAR1 (EMBL:AL939120) (467 aa) fasta scores: E(): FT 1.6e-46, 37.5% id in 336 aa, and to Bacteroides FT thetaiotaomicron NADH dehydrogenase I, chain H BT4064 FT SWALL:AAO79169 (EMBL:AE016943) (358 aa) fasta scores: E(): FT 2.2e-135, 88.26% id in 358 aa, and to Heliobacillus mobilis FT NADH-quinone oxidoreductase chain H SWALL:Q8GDW1 FT (EMBL:AY142861) (337 aa) fasta scores: E(): 3.6e-62, 46.08% FT id in 332 aa" FT /db_xref="GOA:Q5LH51" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/Swiss-Prot:Q5LH51" FT /protein_id="CAH06535.1" FT /translation="MFDFSIITSWIHQTLTSVMPEGLAVFIECVVIGVCIVALYAILAI FT LLIYMERKVCGFFQCRLGPNRVGKWGSIQVLCDVLKMLTKEIIELKHSDKFLYNLAPFM FT VIIASFLTFSCLPISKGLEVLDFNVGVFFLLAASSIGVVGILLAGWGSNNKFSLIGAMR FT SGAQIISYELSVGLSILTMVVLMGTMQFSEIVESQANGWFIFKGHIPALIAFVIYLIAG FT NAECNRGPFDLPEAESELTAGYHTEYSGMHFGFFYLAEYLNMFIVAAVAATIFLGGWMP FT LHIVGLDGFNAVMDYIPGFIWFFGKAFFVVFLLMWIKWTFPRLRIDQILNLEWKYLVPI FT SMVNLVIMVLIVVFGLHF" FT misc_feature complement(order(968699..968767,968804..968872, FT 968915..968983,969098..969166,969209..969277, FT 969314..969382,969410..969478,969629..969697)) FT /note="8 probable transmembrane helices predicted for FT BF0789 by TMHMM2.0 at aa 24-46, 97-119, 129-151, 164-186, FT 201-223, 262-284, 299-321 and 334-356" FT misc_feature complement(968705..969688) FT /note="Pfam match to entry PF00146 NADHdh, NADH FT dehydrogenase, score 383.6, E-value 1.7e-112" FT misc_feature complement(969038..969079) FT /note="PS00668 Respiratory-chain NADH dehydrogenase subunit FT 1 signature 2." FT CDS complement(969846..971438) FT /transl_table=11 FT /gene="nuoC" FT /gene_synonym="nuoCD" FT /gene_synonym="nuoD" FT /locus_tag="BF9343_0755" FT /old_locus_tag="BF0790" FT /product="putative NADH-quinone oxidoreductase chain C/D" FT /EC_number="1.6.99.5" FT /note="Similar to Escherichia coli NADH-quinone FT oxidoreductase chain C/D NuoC or NuoCD or NuoD or B2286 but FT truncated 45 amino acids at the N-terminus SWALL:NUCD_ECOLI FT (SWALL:P33599) (600 aa) fasta scores: E(): 3.2e-44, 31.05% FT id in 541 aa, and to Bacteroides thetaiotaomicron NADH FT dehydrogenase I, chain D BT4065 SWALL:AAO79170 FT (EMBL:AE016943) (538 aa) fasta scores: E(): 3.9e-195, FT 88.49% id in 530 aa, and C-terminus is similar to entire FT protein of Thermoplasma acidophilum probable NADH FT dehydrogenase, chain D ta0967 SWALL:Q9HJK0 (EMBL:AL445066) FT (369 aa) fasta scores: E(): 1.7e-52, 42.38% id in 361 aa" FT /db_xref="GOA:Q5LH50" FT /db_xref="HSSP:2FUG" FT /db_xref="InterPro:IPR001135" FT /db_xref="InterPro:IPR001268" FT /db_xref="InterPro:IPR020396" FT /db_xref="InterPro:IPR022885" FT /db_xref="UniProtKB/Swiss-Prot:Q5LH50" FT /protein_id="CAH06536.1" FT /translation="MEEIKYIEPAALHDEMLRLRNEKQMDFLESLTGMDWGVADEGDAP FT NVTRGLGVVYHLESTVTGERIAIKTSTNNRETPEIPSVSDIWKAADFNEREVFDYYGIV FT FIGHPDMRRLYLRNDWVGHPMRKDNNPEKDNPLRMDNEETYDTTREIELNPDGTYQTQE FT NVIFDDREYVVNIGPQHPATHGVMRFRVSLEGETIKKLDANCGYIHRGIEKMNESLTYP FT QTLALTDRLDYLGAHQNRHALCMCIEKAMGIEVSERVKYIRTIMDELQRIDSHLLFYSC FT LAMDLGALTAFFYGFRDREMILDMFEETCGGRLIMNYNTIGGVQADLHPNFIPRVKKFI FT PYLRGIIHEYHDVFTGNVIARQRLKGVGVLSREDAISFGCTGGTGRASGWACDVRKRMP FT YGVYDKVDFKEIVYTEGDSFARYMVRMDEIMESLNIIEQLIDNIPEGPIQEKMKPIIRV FT PEGSYYTAVEGSRGEFGVFLESHGDKTPYRLHYRSTGLPLVSAVDTICRGAKIADLIAI FT GGTLDYVVPDIDR" FT misc_feature complement(969849..970586) FT /note="Pfam match to entry PF00346 complex1_49Kd, FT Respiratory-chain NADH dehydrogenase, 49 Kd subunit, score FT 238.3, E-value 9.6e-69" FT misc_feature complement(971040..971237) FT /note="Pfam match to entry PF00329 complex1_30Kd, FT Respiratory-chain NADH dehydrogenase, 30 Kd subunit, score FT 100.8, E-value 2.2e-27" FT CDS complement(971460..972050) FT /transl_table=11 FT /gene="nuoB" FT /locus_tag="BF9343_0756" FT /old_locus_tag="BF0791" FT /product="NADH-quinone oxidoreductase chain B" FT /EC_number="1.6.99.5" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT Escherichia coli O157:H7, and Shigella flexneri FT NADH-quinone oxidoreductase chain B NuoB or B2287 or C2828 FT or Z3546 or ECS3171 or SF2363 or s2498 SWALL:NUOB_ECOLI FT (SWALL:P33598) (220 aa) fasta scores: E(): 2.1e-32, 55.06% FT id in 158 aa, and to Bacteroides thetaiotaomicron NADH FT dehydrogenase I, chain B BT4066 SWALL:AAO79171 FT (EMBL:AE016943) (197 aa) fasta scores: E(): 1.6e-74, 93.81% FT id in 194 aa, and to Mus musculus 1010001m04rik protein FT ndufs7 or 1010001m04riK SWALL:Q9DC70 (EMBL:AK003132) (224 FT aa) fasta scores: E(): 4.7e-34, 56.12% id in 155 aa" FT /db_xref="GOA:Q5LH49" FT /db_xref="InterPro:IPR006137" FT /db_xref="InterPro:IPR006138" FT /db_xref="InterPro:IPR014406" FT /db_xref="UniProtKB/Swiss-Prot:Q5LH49" FT /protein_id="CAH06537.1" FT /translation="MEIMKKPKIKSIPYEDFIDNESLEKMVKELNEGGANVFVGVLDDL FT INWGRSNSLWPLTFATSCCGIEFMALGAARYDMARFGFEVARASPRQADMIMVCGTITN FT KMAPVLKRLYDQMADPKYVIAVGGCAVSGGPFRKSYHVVNGVDKILPVDVYIPGCPPRP FT EAFYYGMMQLQRKVKIEKFFGGVNRKEKKPEGK" FT misc_feature complement(971529..971855) FT /note="Pfam match to entry PF01058 oxidored_q6, NADH FT ubiquinone oxidoreductase, 20 Kd subunit, score 183.5, FT E-value 2.8e-52" FT misc_feature complement(971568..971618) FT /note="PS01150 Respiratory-chain NADH dehydrogenase 20 Kd FT subunit signature." FT CDS complement(972041..972391) FT /transl_table=11 FT /gene="nuoA" FT /locus_tag="BF9343_0757" FT /old_locus_tag="BF0792" FT /product="NADH-quinone oxidoreductase chain A" FT /EC_number="1.6.99.5" FT /note="Similar to Rhodobacter capsulatus NADH-quinone FT oxidoreductase chain A NuoA SWALL:NUOA_RHOCA (SWALL:O84969) FT (126 aa) fasta scores: E(): 1.6e-15, 44.54% id in 110 aa, FT and to Bacteroides thetaiotaomicron NADH dehydrogenase I, FT chain A BT4067 SWALL:AAO79172 (EMBL:AE016943) (116 aa) FT fasta scores: E(): 2.2e-42, 87.93% id in 116 aa, and to FT Anthoceros formosae NAD(P)H-quinone oxidoreductase NdhC FT SWALL:NU3C_ANTFO (SWALL:Q31792) (120 aa) fasta scores: E(): FT 4.1e-20, 47.74% id in 111 aa, and to Mesostigma viride FT NAD(P)H-quinone oxidoreductase ndhC SWALL:NU3C_MESVI FT (SWALL:Q9MUQ9) (120 aa) fasta scores: E(): 3.1e-18, 44.95% FT id in 109 aa" FT /db_xref="GOA:Q5LH48" FT /db_xref="InterPro:IPR000440" FT /db_xref="InterPro:IPR023043" FT /db_xref="UniProtKB/Swiss-Prot:Q5LH48" FT /protein_id="CAH06538.1" FT /translation="MNFTLLVVVLLTAIAFVGVVIALSNAISPRSYNAQKFEAYECGIP FT TRGKSWMQFRVGYYLFAILFLMFDVETVFLFPWAVIARDLGPQGLISILFFLVVLVLGL FT AYAWKKGALEWK" FT misc_feature complement(972047..972289) FT /note="Pfam match to entry PF00507 oxidored_q4, FT NADH-ubiquinone/plastoquinone oxidoreductase, chain 3, FT score 122.9, E-value 5.1e-34" FT misc_feature complement(order(972068..972127,972155..972223, FT 972311..972379)) FT /note="3 probable transmembrane helices predicted for FT BF0792 by TMHMM2.0 at aa 5-27, 57-79 and 89-108" FT misc_feature complement(972242..972265) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(972326..972391) FT /note="Signal peptide predicted for BF0792 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.757 between residues 22 and 23" FT CDS complement(972535..972912) FT /transl_table=11 FT /locus_tag="BF9343_0758" FT /old_locus_tag="BF0793" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4068 SWALL:AAO79173 (EMBL:AE016943) (125 aa) FT fasta scores: E(): 2e-17, 43.3% id in 127 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LH47" FT /protein_id="CAH06539.1" FT /translation="MKQNLKYYIIIVLAVLLHSVTMKAANTSYIIEDPDQEECFISQAT FT PASRNILERFHFYCTIMPCEMGHADISHVPTDKSFIRPEMIFHKYRMRNNPFSVHSNHS FT HTYNPSDPLTYYVYGLRKIII" FT misc_feature complement(972844..972912) FT /note="Signal peptide predicted for BF0793 by SignalP 2.0 FT HMM (Signal peptide probability 0.872) with cleavage site FT probability 0.679 between residues 23 and 24" FT misc_feature complement(972847..972900) FT /note="1 probable transmembrane helix predicted for BF0793 FT by TMHMM2.0 at aa 5-22" FT CDS complement(973099..974550) FT /transl_table=11 FT /locus_tag="BF9343_0759" FT /old_locus_tag="BF0794" FT /product="putative potassium uptake protein" FT /note="Similar to Escherichia coli, Escherichia coli FT O157:H7, and Shigella flexneri Trk system potassium uptake FT protein TrkH or B3849 or Z5371 or ECS4777 or SF3925 or FT s3827 SWALL:TRKH_ECOLI (SWALL:P21166) (483 aa) fasta FT scores: E(): 3e-66, 38.76% id in 485 aa, and to Bacteroides FT thetaiotaomicron Trk system K+ uptake protein TrkH BT4097 FT SWALL:AAO79202 (EMBL:AE016943) (483 aa) fasta scores: E(): FT 1.4e-157, 76.19% id in 483 aa, and to Clostridium tetani FT potassium uptake protein TrkH or CTC00235 SWALL:AAO34883 FT (EMBL:AE015936) (484 aa) fasta scores: E(): 3.3e-77, 41.35% FT id in 486 aa" FT /db_xref="GOA:Q5LH46" FT /db_xref="InterPro:IPR003445" FT /db_xref="UniProtKB/TrEMBL:Q5LH46" FT /protein_id="CAH06540.1" FT /translation="MINSKMIYRITGFLLLIETGLLLCCAGVSLIYREDDLSSFLLSAG FT LTTLVAILLLALGKGAEKQLNRRDGYVIVSVAWVVFSLFGMLPFYLSHYIPSITNAFFE FT TMSGFSSTGATILDDIEALPHGLLFWRSMTQWIGGLGIVFFTIAVLPIFGVSGVQLFAA FT EASGPTYDKVHPRIGVTAKWIWTIYAGLTAIEVILLLFGGMGLFDSICHSFATTGTGGY FT STKQDSIAYYNSPYIEYVIGVFMFLSGINFTLLLLLFTGKLKKVSQNAELKWYVMSVIL FT FTAFIAAVLYRTTPMGAEESFRKAFFQVASLHTSTGFVTADYMQWVPVLWGTLTVIMLI FT GACAGSTTGGMKCIRMVILAKVSRNEFKHIVHPNAVLPVRVNKQVISPAILSTVLAFSF FT IYAVIIIVSVLLMLAMGVGFTESIGTVISSIGNMGPGLGSCGPAYSWDGLPDLAKWLLS FT FLMLLGRLELFTVLLLFSSDFWKRN" FT misc_feature complement(973111..974097) FT /note="Pfam match to entry PF02386 TrkH, Cation transport FT protein, score 223.7, E-value 2.3e-64" FT misc_feature complement(order(973120..973188,973315..973383, FT 973513..973581,973663..973731,973768..973836, FT 973936..974004,974065..974133,974275..974343, FT 974377..974430,974458..974517)) FT /note="10 probable transmembrane helices predicted for FT BF0794 by TMHMM2.0 at aa 12-31, 41-58, 70-92, 140-162, FT 183-205, 239-261, 274-296, 324-346, 390-412 and 455-477" FT CDS complement(974555..975895) FT /transl_table=11 FT /locus_tag="BF9343_0760" FT /old_locus_tag="BF0795" FT /product="putative potassium uptake protein" FT /note="Similar to Haemophilus influenzae Trk system FT potassium uptake protein TrkA or hi0625 SWALL:TRKA_HAEIN FT (SWALL:P71354) (458 aa) fasta scores: E(): 3.6e-37, 32.45% FT id in 456 aa, and to Bacteroides thetaiotaomicron Trk FT system K+ uptake protein TrkA BT4098 SWALL:AAO79203 FT (EMBL:AE016943) (446 aa) fasta scores: E(): 9.9e-155, FT 94.39% id in 446 aa, and to Clostridium tetani potassium FT uptake protein TrkA or CTC00236 SWALL:AAO34884 FT (EMBL:AE015936) (489 aa) fasta scores: E(): 1.8e-39, 31.96% FT id in 438 aa" FT /db_xref="GOA:Q5LH45" FT /db_xref="InterPro:IPR003148" FT /db_xref="InterPro:IPR006036" FT /db_xref="InterPro:IPR006037" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q5LH45" FT /protein_id="CAH06541.1" FT /translation="MKIIIAGAGAVGTHLAKLLSREKQDIILMDDDEEKLSTLSSNFDL FT MTVTASPSSISGLKEVGIKEADLFIAVTPDESRNMTACMLATNLGAEKTVARIDNYEYL FT LPKNKEFFQKLGVDSLIYPEMLAAKEIVSSMRMSWVRQWWEFCGGSLILIGTKMREKAE FT ILNVTLAELGAPDIPYHVVAIKRGTETIIPRGDDTIKLHDIVYFTTTRKYIPYIRKIAG FT KEEYADVRNVMIMGGSRIAVRTAQYVPDYMQVKIVDNDINRCNRLTELLDDKTMIINGD FT GRDMDLLIEEGLKNTEAFVALTGNSETNILACLAAKRMGVSKTVAEVENIDYIGMAESL FT DIGTVINKKMIAASHIYQMMLDADVSNVKCLTFANADVAEFTVPENAKITKNKVKDLGL FT PKGTTIGGLIRNGEGILVTGDTLIQAGDHVVVFCLSMMIKKIEKYFN" FT misc_feature complement(974558..974809) FT /note="Pfam match to entry PF02080 TrkA-C, TrkA-C domain, FT score 35.7, E-value 9.1e-08" FT misc_feature complement(974852..975205) FT /note="Pfam match to entry PF02254 TrkA-N, TrkA-N domain, FT score 24.2, E-value 2.1e-05" FT misc_feature complement(975221..975418) FT /note="Pfam match to entry PF02080 TrkA-C, TrkA-C domain, FT score 27.5, E-value 1.4e-07" FT misc_feature complement(975527..975892) FT /note="Pfam match to entry PF02254 TrkA-N, TrkA-N domain, FT score 85.9, E-value 7.1e-23" FT CDS complement(975934..977880) FT /transl_table=11 FT /gene="dxs" FT /locus_tag="BF9343_0761" FT /old_locus_tag="BF0796" FT /product="putative 1-deoxy-D-xylulose 5-phosphate synthase" FT /EC_number="2.2.1.7" FT /note="Similar to Escherichia coli 1-deoxy-D-xylulose FT 5-phosphate synthase Dxs or B0420 SWALL:DXS_ECOLI FT (SWALL:P77488) (619 aa) fasta scores: E(): 3.1e-101, 43.87% FT id in 620 aa, and to Bacteroides thetaiotaomicron FT 1-deoxy-D-xylulose 5-phosphate synthase BT4099 SWALL:Q8A0C2 FT (EMBL:AE016943) (647 aa) fasta scores: E(): 0, 84.62% id in FT 631 aa, and to Chlorobium tepidum 1-deoxy-D-xylulose FT 5-phosphate synthase Dxs or CT0337 SWALL:DXS_CHLTE FT (SWALL:Q8KFI9) (635 aa) fasta scores: E(): 3.3e-113, 48.95% FT id in 623 aa" FT /db_xref="GOA:Q5LH44" FT /db_xref="InterPro:IPR005475" FT /db_xref="InterPro:IPR005476" FT /db_xref="InterPro:IPR005477" FT /db_xref="InterPro:IPR009014" FT /db_xref="InterPro:IPR011766" FT /db_xref="InterPro:IPR015941" FT /db_xref="InterPro:IPR020826" FT /db_xref="UniProtKB/Swiss-Prot:Q5LH44" FT /protein_id="CAH06542.1" FT /translation="MKNEPTYSLLNAINYPKDLRQLSVDQLPEVCEELRQDIIKELSCN FT PGHFAASLGVVELTVALHYVYNTPYDRIVWDVGHQAYGHKILTGRREAFSTNRKLGGIR FT PFPSPEESEYDTFTCGHASNSISAALGMAVAAERKGEKDRHVVAVIGDGSMSGGLAFEG FT LNNASSTANNLLIILNDNDMAIDRSVGGMKQYLFNLTTSNRYNQLRFKTSRLLFKMGLL FT NEERRKALIRLGNSLKSLAAQQQNIFEGMNIRYFGPIDGHDVKNIARILHDIKDMQGPK FT ILHLHTIKGKGFGPAEKQATIWHAPGKFDPVTGKRIVANTDGMPPLFQDVFGHTLVELA FT EKNKRIMGVTPAMPSGCSMNMLMDRMPDRAFDVGIAEGHAVTFSGGMAKDGLLPFCNIY FT SSFMQRAYDNIIHDVAIQKLNVVFCLDRAGLVGEDGPTHHGVFDMAYLRPIPNLTISSP FT MDEHELRRLMYTAQLPDKGPFAIRYPRGRGSLVDWECPLEEIPVGKGRKLKDGNDLAVI FT TIGPIGKLAARAIERAEADTGISVAHYDLRFLKPLDEELLHEVGKKFRHIVTIEDGIIK FT GGMGCAILEFMADNGYYPEIRRIGVPDQFIEHGSVQQLYHLCGMDEEGIYKVITKNKLR FT MDAPVESCMATHS" FT misc_feature complement(975991..976056) FT /note="Predicted helix-turn-helix motif with score 992.000, FT SD 2.57 at aa 626-647, sequence GSVQQLYHLCGMDEEGIYKVIT" FT misc_feature complement(976006..976374) FT /note="Pfam match to entry PF02780 transketolase_C, FT Transketolase, C-terminal domain, score 95.5, E-value FT 9.1e-26" FT misc_feature complement(976408..976908) FT /note="Pfam match to entry PF02779 transket_pyr, FT Transketolase, pyridine binding domain, score 174.7, FT E-value 1.3e-49" FT misc_feature complement(976537..976587) FT /note="PS00802 Transketolase signature 2." FT CDS complement(978379..979722) FT /transl_table=11 FT /locus_tag="BF9343_0762" FT /old_locus_tag="BF0799" FT /product="conserved hypothetical protein" FT /note="Similar to Oceanobacillus iheyensis hypothetical FT conserved protein ob2742 SWALL:Q8EMU8 (EMBL:AP004602) (436 FT aa) fasta scores: E(): 8.1e-37, 33.55% id in 447 aa, and to FT Thermotoga maritima hypothetical protein Tm0336 FT SWALL:Q9WYH1 (EMBL:AE001714) (412 aa) fasta scores: E(): FT 4.6e-24, 33.79% id in 429 aa, and to Halobacterium sp. FT Vng1418C SWALL:Q9HPY2 (EMBL:AE005059) (432 aa) fasta FT scores: E(): 1.5e-18, 28.71% id in 390 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LH43" FT /protein_id="CAH06543.1" FT /translation="MTKKNLLKGICLLWLLLAVTPVLQAQDRAQQASELLDRLIAGQGD FT SVYVHLDDNIRKMLSVEMLNGLFKQLEQQAGKYQSHGEWNTEPINGMTVYYCDVKFERL FT PLRFLTAFNPDGKVNTIRFVPVPPEKTTPPTTSVQDKIKETDIQVCTGNFKLPGTLTLP FT KNGKDLPVVILVHGSGASDRDETVGANKPFRDLAYGLAERGIAVIRYDKRTKVYGADSA FT PAGKEITFDEESVDDALSAIKLARSIPTINPERIYILGHSLGGTLAPRIAQRSDKVPAG FT IILLAGAARPLEDLFISQVKFLASALPSTKDIEKEIAELQKQVDNVKRLGTDTFDITTP FT LPMNLSQAYWMLANQYKPLEVVRKLTLPILVLQGERDYQVTMQDFELWKSALAKHPNAI FT FKSYPRLNHLFQEGEGKSTPLEYSRPSSIPSYVTDDIAAFINRPKPGN" FT misc_feature complement(978928..978957) FT /note="PS00120 Lipases, serine active site." FT misc_feature complement(979648..979722) FT /note="Signal peptide predicted for BF0799 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.908 between residues 25 and 26" FT CDS complement(979719..980015) FT /transl_table=11 FT /locus_tag="BF9343_0763" FT /old_locus_tag="BF0800" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4196 SWALL:AAO79301 (EMBL:AE016944) (100 aa) FT fasta scores: E(): 3.2e-14, 47.95% id in 98 aa" FT /db_xref="GOA:Q5LH42" FT /db_xref="UniProtKB/TrEMBL:Q5LH42" FT /protein_id="CAH06544.1" FT /translation="MGSKKTDLMRISYFVAIVILVCLIGNLKDLWLQSWTDLIIYLIVL FT FAAAECLFSTFARIRAVGEQKQPRWLTSISLLIYGILFLGTLFFIGDFLINKL" FT misc_feature complement(order(979731..979799,979833..979901, FT 979911..979979)) FT /note="3 probable transmembrane helices predicted for FT BF0800 by TMHMM2.0 at aa 13-35, 39-61 and 73-95" FT CDS 980221..980868 FT /transl_table=11 FT /locus_tag="BF9343_0764" FT /old_locus_tag="BF0801" FT /product="putative phosphoglycolate phosphatase" FT /EC_number="3.1.3.18" FT /note="Similar to Alcaligenes eutrophus phosphoglycolate FT phosphatase, chromosomal CbbZC SWALL:GPHC_ALCEU FT (SWALL:P40852) (231 aa) fasta scores: E(): 3.2e-10, 26.19% FT id in 210 aa, and to Bacteroides thetaiotaomicron FT phosphoglycolate phosphatase BT4184 SWALL:AAO79289 FT (EMBL:AE016944) (216 aa) fasta scores: E(): 1.6e-64, 77.2% FT id in 215 aa, and to Chlorobium tepidum phosphoglycolate FT phosphatase Gph or CT0889 SWALL:Q8KE05 (EMBL:AE012855) (225 FT aa) fasta scores: E(): 1.1e-24, 38.86% id in 211 aa" FT /db_xref="GOA:Q5LH41" FT /db_xref="InterPro:IPR000150" FT /db_xref="InterPro:IPR005833" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006439" FT /db_xref="InterPro:IPR023198" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:Q5LH41" FT /protein_id="CAH06545.1" FT /translation="MKKLIIFDLDGTLLNTIADLAHSTNHALQTLGYPTHEVASYNFMV FT GNGINKLFERALPEGEKTEENVLRVRKEFLLHYDRHNADESRPYPGIPELLETLQDKDY FT KLAVASNKYQAATEKLIAHYFPGIRFVAVFGQREGVKVKPDPAVVHDILRIAGVSKDEV FT LYVGDSGVDMQTAINSGVTSCGVTWGFRPRTELESFCPDYIVDKAETILSIV" FT misc_feature 980224..980787 FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 99.3, E-value 6.4e-27" FT misc_feature 980230..980265 FT /note="PS01228 Hypothetical cof family signature 1." FT CDS complement(980948..982504) FT /transl_table=11 FT /locus_tag="BF9343_0765" FT /old_locus_tag="BF0802" FT /product="putative secreted sulfatase" FT /note="Similar to Bacteroides thetaiotaomicron putative FT secreted sulfatase YdeN precursor BT3796 SWALL:AAO78901 FT (EMBL:AE016942) (518 aa) fasta scores: E(): 3.8e-172, FT 78.18% id in 518 aa, and to Bacteroides thetaiotaomicron FT N-acetylgalactosamine-6-sulfatase precursor BT3057 FT SWALL:AAO78163 (EMBL:AE016938) (508 aa) fasta scores: E(): FT 1.4e-46, 41.21% id in 512 aa, and to Caulobacter crescentus FT sulfatase family protein Cc1172 SWALL:Q9A922 FT (EMBL:AE005795) (521 aa) fasta scores: E(): 1.8e-20, 28.62% FT id in 524 aa" FT /db_xref="GOA:Q5LH40" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR024607" FT /db_xref="UniProtKB/TrEMBL:Q5LH40" FT /protein_id="CAH06546.1" FT /translation="MNKKIIIPLALAPLAAPALQAQHQQPNGRTDTRPNIILFMVDDMG FT WQDTSLPFWTQKTHYNEVYETPNMERLAKQGMMFTQAYASSISSPTRCSLITGTNAARH FT RVTNWTYPKGQQTDRPSDVFNVADWNVNGVCQVPNIDHTFQATSLAEILKDNGYHTIHC FT GKAHFGAVNTPGESPYHMGFEVNIAGHAGGGLASYLGENNYGNRTDGKPNPWFAVPGLE FT KYWGTDTFVSEALTLEAIKALDHAKEYNQPFFLYMAHYAIHVPIDKDKRFYQKYINKGL FT TPKEAAYAALIEGMDKSLGDLMDWLDKNGEADNTIVIFMSDNGGLSSEPEWRDGKLHTQ FT NSPLNSGKGSAYEGGVREPMIVRWPGVVKPDTKCDKYLIIEDFYPTILEMAQIKHYKTV FT QPIDGISFMPLLTHTGDPSKGRSLHWNFPNHWGNDGPGIGPTCTVRKGDWKLIYYYDSG FT KKELFNIPEDIGEKNDLAALHPDIVKSLSKELGDYLRKVGGQRPSFKATGKPCPWPDEI FT K" FT misc_feature complement(981287..982405) FT /note="Pfam match to entry PF00884 Sulfatase, Sulfatase, FT score 91.0, E-value 2e-24" FT misc_feature complement(982211..982249) FT /note="PS00523 Sulfatases signature 1." FT misc_feature complement(982442..982504) FT /note="Signal peptide predicted for BF0802 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.625 between residues 21 and 22" FT CDS complement(982525..984600) FT /transl_table=11 FT /locus_tag="BF9343_0766" FT /old_locus_tag="BF0803" FT /product="possible alpha-galactosidase" FT /note="C-terminus is similar to Bifidobacterium breve FT alpha-galactosidase Aga SWALL:Q93CM6 (EMBL:AF406640) (702 FT aa) fasta scores: E(): 1.3e-13, 28.64% id in 391 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT3797 SWALL:AAO78902 (EMBL:AE016942) (693 aa) fasta FT scores: E(): 2.6e-195, 66.76% id in 695 aa, and to FT Sulfolobus tokodaii putative Sip1 protein st2554 FT SWALL:Q96XG2 (EMBL:AP000990) (674 aa) fasta scores: E(): FT 4.1e-30, 27.88% id in 538 aa" FT /db_xref="GOA:Q5LH39" FT /db_xref="InterPro:IPR008811" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LH39" FT /protein_id="CAH06547.1" FT /translation="MKRYFIISLLTLASTVAPLTAVFAQSSFIYEKGKSFKDVNASPMP FT QTIRLDRTAEPVIYENAVPENATTICYRIQLPSYVRGTFFSRDSRSGDYEWPNNTNRLL FT PWMFNHLTDLTRDDYPGIPSNARPSTLGDALLLQLTDGSYLFTKAVAGDNSLSWFQVNT FT DGSLNLYVSTLGTDRLEHKVPVALVQSAGNIYQVFRQAYETLISDRNVSALQKRTEKNY FT FEALNYLGWCTWEHYHFDIDETKILNDLDAIETSGVPVRYVLIDDGHLANKNRQLTSFT FT PDPQRFPNGWAPIMAHKNKDKIRWIGLWYALSGYWMGISPDNDFPTHVKNSLYSFNGSL FT LPGKSTPNIDTFYQYYVHSLKTHGFDFLKVDNQAFTLPLYMGSTEVVRQAKECNLALEK FT QTHAQQVGLMNCMAQNVLNTDHTLHSGVARVSIDYKKYNENMAKSHLFQSYTNTLLQGQ FT TVWPDHDMFHSSDTICGSLMARSKAISGGPVYLSDSPKEFVKENIFPLIDKEGKIFRPE FT APAIPTPESVLTNPLQDGKAYRVFAPTGDEAVSVICYNLNTSPKHRKVTAEIDPKDYLL FT RETLTGKPTPQQKRVILFDWNNQTATELTGKQTVELDGFTDRLFHLCPIHDGWAVIGIQ FT EKYLSPAAVRILSSTPDKLVLNVLSPGTLKIWTENSGKQELRNIQVKETGKMTIRK" FT misc_feature complement(983122..984003) FT /note="Pfam match to entry PF02065 Melibiase, Melibiase, FT score -211.9, E-value 0.0089" FT misc_feature complement(983566..983589) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(984520..984588) FT /note="1 probable transmembrane helix predicted for BF0803 FT by TMHMM2.0 at aa 5-27" FT misc_feature complement(984529..984600) FT /note="Signal peptide predicted for BF0803 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.967 between residues 24 and 25" FT CDS complement(984610..985992) FT /transl_table=11 FT /locus_tag="BF9343_0767" FT /old_locus_tag="BF0804" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3798 SWALL:AAO78903 (EMBL:AE016942) FT (460 aa) fasta scores: E(): 3.8e-180, 89.1% id in 459 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT4136 SWALL:AAO79241 (EMBL:AE016943) (605 aa) FT fasta scores: E(): 1.1e-34, 31.14% id in 456 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT1625 SWALL:AAO76732 (EMBL:AE016932) (605 aa) fasta FT scores: E(): 4e-32, 30.83% id in 441 aa" FT /db_xref="GOA:Q5LH38" FT /db_xref="InterPro:IPR000933" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LH38" FT /protein_id="CAH06548.1" FT /translation="MNRINTTLLLLFCSVYCLAQQATIPVPKPFQLKWHQAEMGAVFHY FT DLHVFDGVRYGQGNNRINPIEDYNIFNPTELNTDQWVLAAKAAGCKFAVLTATHETGFG FT LWQSDVNPYCLKAVKWRDGKGDIVRDFVNSCRKYGLQPGIYIGIRWNSLLGIHNFKAEG FT EGEFAHNRQAWYKRLCEKMVTELCTRYGDLYMIWFDGGADDPRGDGPDVEPIVNKYQPN FT CLFYHNIDRADFRWGGSETGTVGYPCWSTFPAPCSHHKRIESNVDQIELLKHGDKDGKY FT WVPAMADTPLRGANGRHEWFWEPDDENNIYPLNELMDKYEKSVGRNATLILGLTPDPNG FT LIPTGDEQRLKEFGTEINRRFSSPLAQISGQKKSLTLKLDKKQPVNYCIIQENIQNGER FT IRQYKVEAKVNGKWQTVCSGESVGHKRIEKFDPVEATALRLTVLQSIALPDIINFSAFS FT VN" FT misc_feature complement(985936..985992) FT /note="Signal peptide predicted for BF0804 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.880 between residues 19 and 20" FT CDS complement(985995..987446) FT /transl_table=11 FT /locus_tag="BF9343_0768" FT /old_locus_tag="BF0805" FT /product="putative sulfatase" FT /note="Similar to Prevotella sp. RS2 mucin-desulfating FT sulfatase MdsA precursor SWALL:Q9L5W0 (EMBL:AF248951) (517 FT aa) fasta scores: E(): 5.1e-17, 28.57% id in 518 aa, and to FT Bacteroides thetaiotaomicron putative sulfatase YidJ BT3799 FT SWALL:AAO78904 (EMBL:AE016942) (489 aa) fasta scores: E(): FT 1.5e-160, 78.69% id in 474 aa, and to Yersinia pestis FT putative sulfatase YPO0829 or Y3215 SWALL:Q8ZHR0 FT (EMBL:AJ414144) (517 aa) fasta scores: E(): 1e-68, 43.42% FT id in 479 aa" FT /db_xref="GOA:Q5LH37" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR024607" FT /db_xref="UniProtKB/TrEMBL:Q5LH37" FT /protein_id="CAH06549.1" FT /translation="MKNIIPQALLTMPILSTGLQAQEKQPTPNLVFIMADQYRGDAIGC FT IGKEPVKTPHLDKLASEGINFTNAISSYPVSSPARGMLMTGMYPIGSKVTGNCNSETAP FT YGVELSQNARCWSDVLKDQGYNMGYIGKWHLDAPYKPYVDTYNNRGKVAWNEWCPPERR FT HGFDHWIAYGTYDYHLKPMYWNTTAPRDSFYYVNQWGPEYEASKAIEYINGQKDQKQPF FT ALVVSMNPPHTGYELVPDRYKEIYKDLDVEALCKGRPDIPAKGTEMGDYFRNNIRNYYA FT CITGVDENVGRIIEALKQNNLFDNTIVVFTSDHGICMGAHENAGKDIFYEESMRIPMIL FT SWPDQIKPRKSDPLMIAFADLYPTLLSMMGFSKEIPETVQTFDLSNEVLTGKNKKDLVQ FT PYYFVKFDNHATGYRGLRTDRYTYAVHATDGKIDNVILFDRTNDPHEMNNIASQQLKLT FT HTFNRQLKTWLEKTNDPFAQYIKLK" FT misc_feature complement(986298..987365) FT /note="Pfam match to entry PF00884 Sulfatase, Sulfatase, FT score 162.2, E-value 7.7e-46" FT misc_feature complement(987189..987227) FT /note="PS00523 Sulfatases signature 1." FT misc_feature complement(987384..987446) FT /note="Signal peptide predicted for BF0805 by SignalP 2.0 FT HMM (Signal peptide probability 0.996) with cleavage site FT probability 0.965 between residues 21 and 22" FT CDS complement(987561..989543) FT /transl_table=11 FT /locus_tag="BF9343_0769" FT /old_locus_tag="BF0806" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2806 SWALL:AAO77912 (EMBL:AE016937) (666 aa) FT fasta scores: E(): 5.3e-51, 43.72% id in 693 aa, and FT identical to previously sequenced Bacteroides fragilis FT hypothetical protein (fragment) SWALL:BAC56894 FT (EMBL:AB102772) (218 aa) fasta scores: E(): 1.8e-33, 43.42% FT id in 228 aa, and to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT3175 SWALL:AAO78281 (EMBL:AE016939) (621 aa) FT fasta scores: E(): 2.4e-25, 27.69% id in 686 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LH36" FT /protein_id="CAH06550.1" FT /translation="MKKNLLYIFSLASVLCSCNDFLDKEPLDAVPTDKYLLAESDLAAY FT SANLYDQLPSHTPGQYSMGVFATDNNSDNQAASNPNGSFVKGETRVAQSGGAWDFGKIR FT NVNYFINKVRPRLEAGELSGVEANNMHYLGEMYFFRAYIYFTKLVALGDFPILKHWISE FT DYETVREASKRRPRNEVARFIIQDLDSAYYYMKATPPMSNRLTKDCAALMKSRVALFEG FT TWEKYHKGTARVPGGPGWPGANKDYLKDFTINIDSEIKYFLTEAKTAAQIVADKYTLFN FT DYPSLFNSQSLANASEVLLWRAYDASLTPAVNHFVVGYIQRNGGGNTGWTRSMMQSYLM FT ENGLPIYANNSGYQGDKTYEAVATNRDPRLIYNTLLPGDLLSEGGSNIEYLVKGYGYYY FT RAPIVLGQDENKCPTGYSVKKGLATDAAQGPTLPSTTACVIFRAAEAYLNYMEADYELN FT NSLDANSSKYWKALRNRAGMDTDFQKTIDATDLSKEIDFARYSGSEFVSTTLYNIRRER FT RIEFAAEGLRLNDLKRWRALDMMQGYHVEGFDLWSENYQRYKTPSPIPVADVTLSVINL FT IESGNNNANVSAKSESQYLRPYRINTNNIAYNGYNWNQNKYLNPIAFDHFRLTTAEEGS FT TDYTTSTIYQNPGWKIETSSLPEGD" FT misc_feature complement(989478..989543) FT /note="Signal peptide predicted for BF0806 by SignalP 2.0 FT HMM (Signal peptide probability 0.705) with cleavage site FT probability 0.664 between residues 22 and 23" FT misc_feature complement(989490..989522) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(989556..992741) FT /transl_table=11 FT /locus_tag="BF9343_0770" FT /old_locus_tag="BF0807" FT /product="putative outer membrane protein" FT /note="Similar to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrG SWALL:Q8VTA9 FT (EMBL:AF329100) (1137 aa) fasta scores: E(): 1.7e-57, FT 29.77% id in 1088 aa, and to Bacteroides thetaiotaomicron FT putative outer membrane protein, probably involved in FT nutrient binding BT2805 SWALL:AAO77911 (EMBL:AE016937) FT (1083 aa) fasta scores: E(): 4.8e-187, 46.58% id in 1084 FT aa, and to Bacteroides thetaiotaomicron putative outer FT membrane protein, probably involved in nutrient binding FT BT4357 SWALL:AAO79462 (EMBL:AE016945) (1178 aa) fasta FT scores: E(): 2.2e-119, 37.4% id in 1088 aa" FT /db_xref="GOA:Q5LH35" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LH35" FT /protein_id="CAH06551.1" FT /translation="MKKISILFMLLLGITTLYAQQLNITGTVIDKKLNEPIIGATVQVK FT GTNNGSITDMEGKFSLKNVSKGGILTVSYIGYTTQSIPLNGTQTSFRIELSEDSKTLDE FT VVVVGFGTQKKVNLTGAVTSVDTKALASRPVSQVGQALQGVVPGLNLSTPDLGGQLGQT FT MNVNIRGTGTIGKGSSASPLILIDGMEGNMNNLNPEDIENISVLKDAASSSIYGSRAAF FT GVILITTKKGKAGKMQVNYNNSFRYSGPTNLPNQLDSYRFANYFNDAAINQGGSVIFDE FT ETIDRIQKYMAGEITTTTIANGTNWHFHEKANDNVNWWKKHFQWAWSNEHNISLNGGTE FT KLQYYVSGSYLNQDGNLRYGNDNYKRYNATAKVNTQINKYVDFNINTKFVRFDLDNPVY FT LEEGGLLYHDIARMWPMMPFKDPNGYYMRNGKLNQLTDGGRAKTHNDNIYLQGQLVIHP FT LKGWNIYAEAGMRVINQNKQTNLNPIYEHDVNGNPLALAFSGSYSPGSSFARSAYHNSN FT FYTTSVYTDYTLQIKDHYFKALVGMNTEEYVYRELAAQRPDVISSLIPEISAATGEDKI FT NSSKYNDWSTAGFFGRLNYSYKDRYMAEVNVRYDGSSRFLKDQRWNVFPSFSLGWNLAR FT ESFFEPINNIINTLKPRVSWGMLGNQNTDSYYPFYLTQSVTANGGNWLMDGSRPTTAGV FT PGMVSSTLTWEKIYNTNLGIDLGMFNNRLNMTFEYFIRRTKDMVGPAAEVGAILGTALP FT NTNNAELKNKGWELQANWRDNIGKVNYNIGFNLSDNRAKVISYPNASKALWDSNGNTLY FT YNGMTIGEIWGYETEGIAKTDAQMTEWLASNDQSKIGSVWGAGDIMYRDLNGDGIVDKG FT NSTATDHGDLKKIGNSTPRLRFGLSLGADWKGFDIQMFFQGVMKRDLWLSGPMFWGADG FT GEWQSVGFDEHLDYFRPENTTSIFGANLNSYYPKAYLGDKGNKNKQTQTRYLQNGAYMR FT MKNLQIGYTFPKAWMNKAKIEKLRIYVSGENLFTISGIADMFDPEATAGNGFSNGKTYP FT LSKTISFGLNITL" FT misc_feature complement(989577..992396) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 2.6, E-value 0.00015" FT misc_feature complement(992685..992741) FT /note="Signal peptide predicted for BF0807 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.910 between residues 19 and 20" FT CDS 992927..997012 FT /transl_table=11 FT /locus_tag="BF9343_0771" FT /old_locus_tag="BF0808" FT /product="putative two-component system sensor histidine FT kinase/response regulator fusion protein" FT /note="Similar to Pseudomonas putida bZIP histidine kinase FT TobS SWALL:Q9EVJ0 (EMBL:AF180147) (978 aa) fasta scores: FT E(): 2.3e-34, 31.41% id in 452 aa, and to Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase/response regulator, hybrid BT3800 SWALL:AAO78905 FT (EMBL:AE016942) (1333 aa) fasta scores: E(): 0, 61.14% id FT in 1333 aa, and to Bacteroides thetaiotaomicron FT two-component system sensor histidine kinase/response FT regulator, hybrid BT2391 SWALL:AAO77498 (EMBL:AE016935) FT (1377 aa) fasta scores: E(): 3.7e-183, 46.94% id in 1374 FT aa" FT /db_xref="GOA:Q5LH34" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR011006" FT /db_xref="InterPro:IPR011042" FT /db_xref="InterPro:IPR011047" FT /db_xref="InterPro:IPR011110" FT /db_xref="InterPro:IPR011123" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q5LH34" FT /protein_id="CAH06552.1" FT /translation="MKKLNLFLLVLFICNCPVVSGYAFFDRDIRLLTMQDGLADNTITS FT IYKDRDGFMWFGTNNGLSRYDGKLIKNFSSSPAYMYVSEIVEMSDRYLGVIAGNTLYCF FT ARSLEKFIPIVHATDYSSVHVSHLLPIDNNSFWGLSGNKLYLYTQEEVKNEKGEVVQIK FT LKCEKQYKDLIDSGDNFCAMCYTDNHEMLCLVTQQGNLLLFQPESSEKSKKISLWKNKT FT WDATSVLYDKGVVWVSTIGHGILRYYVSSGYIDRITYKENNKENSLSHTDVFQIIPINN FT NRYLAVTWSGYTLLFQDKNDPKRMMTEIYYNTASQLHRNLETRMISAYYDPSGIVWIGT FT NGGGVIYSDLRSQFYNQFHQERHNEICGIVMDNRKYVWMATFHQGIMKSEQPFEPGRRM FT NFTRVGTPDIQSKNTVLCAINDNRGSLWFGNRDGTLTSYNEATKQFRLHFLQDRGKVNT FT VSIWALYWDTNRNLWVGTNDGVWKLNIDSGFCIKIPIEILFKDPTPICIRAIAGTKDGT FT IWLGTSNAGVCKLKIDSRGEMSLETGYEKKANIKNNSVRSLLVSSDGNVYVGYMDGFAI FT LSPKKDAIREYYTTRNGLCSNFIGCLVEDNRGHIWLGSNSGVSRYSRHQHLFYNYYISG FT SNRSALLADNTLFFGNNKSLTYFDPDDVDGHLDEDQVLITGLEVDGRPVGIGDKINGQT FT VLAEGISYTSSITLNNENRDFVLSFNNLSYAEEQQKYNYRLLPYQTHWLVSNDGEKATY FT MNLPEGDYTFEVKNIYPDGKDGKVTSLQIHILPHWSRTLPFRLFILLLLAGGVAYLIRL FT VKHRQMRMEREMRMEHELLSVNLEREKERQIRMERENFFTSAAHELRTPLTLILAPLQE FT LLEHIKASDPLYSKLYTMYKNSSSLHTLVDQLLYVQKIEAGMVKLRLSEADIVELVREV FT AESFRQMAGIKGCTFQVRLPEDPVFLWIDTEKITSSVGNLLSNAFKYTSPNGEVLLTLT FT RMEQDGKPFCQITVSDTGEGIPDEFQKRIFDSFITGDNSPAFSTKVGIGLRIVKNTMDL FT HHGQVILDSEPGKGSTFVLLIPEGKSHFTGDLYEIVDYRGHETEPQFQPLSVQEKSEEG FT VPVTKKTLLIVEDNVDVRQYIRSLFVTKYTVLEAADGEEGVRIATNEIPDLIISDVMMP FT VKDGFACCREIRERQETAHIPILMLTAKAEDADVLQGSYSGADDYMMKPFNPEVLKAKV FT ENLILQRERLKRIYTKALMLKRESVEDEEADDEFIQKLIHVVEKNLSNENFNVKMLAEQ FT LHMSQPTLYRKVKQRSELSVVDMIRSVRVSKAASLIMENRYSIQEISEKVGFSDARTLR FT KHFTEQFGVPPSKYMENK" FT misc_feature 992927..992989 FT /note="Signal peptide predicted for BF0808 by SignalP 2.0 FT HMM (Signal peptide probability 0.987) with cleavage site FT probability 0.852 between residues 21 and 22" FT misc_feature order(992945..993001,995297..995365) FT /note="2 probable transmembrane helices predicted for FT BF0808 by TMHMM2.0 at aa 7-25 and 791-813" FT misc_feature 995462..995662 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 55.1, E-value 1.3e-13" FT misc_feature 995798..996142 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 105.2, FT E-value 1.1e-28" FT misc_feature 996263..996625 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 119.3, E-value 6.3e-33" FT misc_feature 996713..996853 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 15.1, E-value 0.08" FT misc_feature 996752..996817 FT /note="Predicted helix-turn-helix motif with score FT 1939.000, SD 5.79 at aa 1276-1297, sequence FT FNVKMLAEQLHMSQPTLYRKVK" FT misc_feature 996860..996988 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature 996872..997003 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 36.6, E-value 5e-08" FT CDS complement(997179..998603) FT /transl_table=11 FT /locus_tag="BF9343_0772" FT /old_locus_tag="BF0809" FT /product="putative hexuronate transporter" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 hexuronate transporter ExuT or B3093 or Z4446 or FT ECS3975 SWALL:EXUT_ECOLI (SWALL:P42609) (472 aa) fasta FT scores: E(): 2e-23, 28.27% id in 481 aa, and to Bacteroides FT thetaiotaomicron hexuronate transporter BT4105 SWALL:Q8A0B6 FT (EMBL:AE016943) (495 aa) fasta scores: E(): 8.6e-151, FT 78.78% id in 495 aa, and to Pseudomonas syringae MFS FT transporter, phthalate permease family PSPTO5219 FT SWALL:Q87US7 (EMBL:AE016875) (436 aa) fasta scores: E(): FT 4.9e-25, 29.58% id in 480 aa" FT /db_xref="GOA:Q5LH33" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:Q5LH33" FT /protein_id="CAH06553.1" FT /translation="MGKMTNYRWTICAMLFFATTINYLDRQVLSLTWDEFIKPEFHWNE FT SHYGIITAVFSIVYAICMLFAGRFIDWMGTKKGYLWSIGIWSAGACLHAFCGIITEEYV FT GMHSAAELIAATGDVVVVLATISMYCFLVARCILALGEAGNFPAAIKVTAEYFPKKDRA FT YATSIFNAGASIGALIAPLSIPLLAKAWGWEMAFVIIGALGFVWMGFWVFMYTAPSKNK FT FVNSAELEYIEQDKHETYTATVKENEEKKSMTFRQCFTYRQTWAFAFGKFMTDGVWWFF FT LFWAPSYLNTQFDIKTSEGLGRALIFTLYAITMLSIYGGKLPTIIIHKTGLNPYAARMR FT AMLIFAFFPLLVLLAQPLGTISPWFPVIMIGIGGAAHQSWSANIFSTVGDMFPKSAIAS FT ITGIGGMAGGVGSMILQYSAGELFVHADKTQMVFMGFIGKPAGYFVIFCICSVAYLIGW FT IVMKALVPKYKPIILN" FT misc_feature complement(997224..998573) FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score -100.5, E-value 0.00013" FT misc_feature complement(order(997224..997283,997344..997412, FT 997509..997577,997638..997706,997749..997817, FT 997959..998027,998040..998108,998181..998249, FT 998307..998375,998394..998462,998532..998585)) FT /note="11 probable transmembrane helices predicted for FT BF0809 by TMHMM2.0 at aa 30-47, 71-93, 100-122, 142-164, FT 189-211, 216-238, 286-308, 323-345, 366-388, 421-443 and FT 464-483" FT CDS 999068..1000417 FT /transl_table=11 FT /locus_tag="BF9343_0773" FT /old_locus_tag="BF0810" FT /product="putative alpha-L-fucosidase" FT /note="Similar to Dictyostelium discoideum FT alpha-L-fucosidase precursor AlfA SWALL:FUCO_DICDI FT (SWALL:P10901) (461 aa) fasta scores: E(): 1.5e-25, 29.06% FT id in 406 aa, and to Homo sapiens hypothetical protein FT Flj35595 SWALL:Q8NAC2 (EMBL:AK092914) (444 aa) fasta FT scores: E(): 3.3e-29, 28.96% id in 397 aa, and to FT Thermotoga maritima alpha-L-fucosidase, putative TM0306 FT SWALL:Q9WYE2 (EMBL:AE001712) (449 aa) fasta scores: E(): FT 1.1e-28, 33.01% id in 418 aa" FT /db_xref="GOA:Q5LH32" FT /db_xref="InterPro:IPR000933" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR016286" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LH32" FT /protein_id="CAH06554.1" FT /translation="MKNNRLIITLIALFLLGFGLKAQTASTEETAAQKEKRMEWFAQAK FT LGIFIHWGIYAVNGVSESWSFFNNYLPYEEYMAQEKGFTASAYNPQEWVKLIKESGARY FT TVITTKHHDGVALWDTKAGDLSTVKSTPAGRDLIAPFVKEVRKQGLKLGFYYSLLDWSH FT PDYPNKTRTEVRYKNDPDRWAKFVKFNFGQLSELNKTWKPDLYWFDGDWEQTAEAWDSK FT GIINLLRSTNPNVIVNSRIQGYGDYATPEQGVPVVRPADKYWELCMTMNDSWGYQHADT FT NYKTPFMLLRTFVDCLSMGGNLLLDIGPKEDGTIPAEQIAVLKEFGRWTKKHKEAIYET FT RAGIPCEHFQGYTTLNKAGDILYLYLPYKPNGPIEVKGLVNKVNRVWVVGNGAMLPYKV FT YNKNYWSEVPGNLYIDIPERVQDEQITVIAVLLDGPIKLYRGVGQVIESN" FT misc_feature 999068..999139 FT /note="Signal peptide predicted for BF0810 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.640 between residues 24 and 25" FT misc_feature 999104..1000204 FT /note="Pfam match to entry PF01120 Alpha_L_fucos, FT Alpha-L-fucosidase, score 51.5, E-value 7e-15" FT CDS 1000436..1001683 FT /transl_table=11 FT /locus_tag="BF9343_0774" FT /old_locus_tag="BF0811" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="GOA:Q5LH31" FT /db_xref="InterPro:IPR008977" FT /db_xref="InterPro:IPR014784" FT /db_xref="InterPro:IPR015196" FT /db_xref="InterPro:IPR015197" FT /db_xref="PDB:3KS7" FT /db_xref="UniProtKB/TrEMBL:Q5LH31" FT /protein_id="CAH06555.1" FT /translation="MNIRLTSLFVSLFLSVPVWAGGHKNLPAKGDLHIPVFENVNVRFS FT PDTYPDNYNEADGTGVYHLVNGRIILKKITLPEYKRNVSVSLKVTLASNGDRWDKSGSC FT FVLPKSSAINLLTIARDGMKFPSVDSLKLEKMVGIVPGKDYLPTVELMRFMTPFGIGHY FT SNNNDSLSSKRRPVYIPKWESNVTWQQDITDLYPLLEGEAYVGIYIDTWTSEGYLVNAD FT IDVKESRLACDVLPKRHVEPLMNTVYYMGQSYPDIFARRDVSTDFTVPKGAKNIRLKYI FT VTGHGGHSGGDEFVQKRNIISVDGKEVLNFIPWRDDCASFRRFNPATGVWLIKRLASYI FT GEKGYTEKEVEEPLASSDLSRSNWCPGSDVVPEEAVIGTLAPGKHTFTVSIPEAQAVDG FT NKLNHWLVSAYLVWEE" FT misc_feature 1000436..1000495 FT /note="Signal peptide predicted for BF0811 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.999 between residues 20 and 21" FT CDS complement(1002004..1005450) FT /transl_table=11 FT /locus_tag="BF9343_0775" FT /old_locus_tag="BF0812" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron DNA helicase FT BT4104 SWALL:Q8A0B7 (EMBL:AE016943) (1124 aa) fasta scores: FT E(): 8.2e-184, 78.3% id in 1143 aa, and to Synechocystis FT sp. hypothetical protein Sll1582 sll1582 SWALL:P73197 FT (EMBL:D90904) (1118 aa) fasta scores: E(): 8.2e-17, 27.78% FT id in 997 aa, and to Anopheles gambiae str. PEST FT ensangp00000021787 SWALL:EAA04125 (EMBL:AAAB01008807) (1040 FT aa) fasta scores: E(): 2.2e-10, 24.61% id in 642 aa" FT /db_xref="InterPro:IPR014001" FT /db_xref="UniProtKB/TrEMBL:Q5LH30" FT /protein_id="CAH06556.1" FT /translation="MENEVNESFEILLAACRTADSNLAVAYKQLRDLLERLCRAQMQDE FT SLQMTDLSARISFVSARAGLTIVEQNRLHTFRLTSNAILNRKEEPVREKLLRDAKTLAF FT FIRKLYEVEIPGELYHLLPRADATYLVAPPAKKRIERMRVCYQYADEQYLYVTPVDTIA FT DEYLRIRYNVPQINEEFAQTCEILWCHAQLNLLDVAIDETGVLTPSFIVLEPDYLIDIS FT SLAECFRDYGHHPANYVLARLQPIDNARPLLLGNIANLFLDEWIHAENEPDYRECMQKA FT FRRYPIELAACTDLRDREKERQFFDDCKLHFEHIREVVTDTFRAPGYELDKTDAVLEPS FT YICEALGLQGRLDYMQRDMSSFIEMKSGKADEFSIRNKVEPKENNKVQMLLYQAVLQYS FT MGMDHHRVKAYLLYTRYPLLYPARPSWAMVRRIINLRNRIVSDEYGIQLRNSVEYTASK FT LQAIRSDILNERGLSGRFWEQYLRPSIDNLSQKLASLTPLEQSYFYALYNFITKELYTS FT KSGDVDYEGRTGAAALWLSTLTEKCEAGEILYDLRIKENHAADEHKAYILLEQRKEGYG FT ENKLSPEPNEISSEVEKGAQALPNFRQGDAIVLYERNRNEDNVTNKMVFKGNIEFITEE FT EIGIRLRATQQNSSVLPPDSLYAIEHDTMDTTFRSMYQALSAFASATKERRDLLLAQRM FT PEFEYGLDKQILTAPDDFTRVTLKALAAKDFFLLVGPPGTGKTSCALKKMVETFHCEAQ FT TQILLLSYTNRAVDEICKAISSIRPEVDFIRVGSELSCDEAYRHHLIENELSLCTRRSE FT VAERIARCRIFVGTVASISGKPELFRLKRFDVAIIDEATQILEPQLLGILCARSENGEN FT AVGKFILIGDHKQLPAVVLQNTEQSEIYDEGLRSAGLKNLKDSLFERLYRTLQTSSEDL FT FPDSASVSAPNHRSFDMLCKQGRMHPEVAHFTNQAFYEGRLLPVGLPHQMEDNQDVQRM FT VFLPSEPEPQGTSAKVNHSEARIVARIAADVYQQYGGTFDGMRTLGIITPYRSQIALIR FT KEIVKMGIPELNSILVDTVERFQGSERDVIIYSFCVNYPYQLRFLSNLTEENGVFIDRK FT LNVALTRARKQMFITGVPRLLEQNPIYDSLIKLIKQQEPLS" FT misc_feature complement(1003240..1003263) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(1005561..1006601) FT /transl_table=11 FT /locus_tag="BF9343_0776" FT /old_locus_tag="BF0813" FT /product="putative transmembrane acyltransferase" FT /note="Similar to Streptomyces avermitilis putative FT macrolide O-acyltransferase MdmB or sav3790 SWALL:Q82GV6 FT (EMBL:AP005036) (392 aa) fasta scores: E(): 1.2e-14, 29.41% FT id in 306 aa, and to Bacteroides thetaiotaomicron FT acyltransferase BT1546 SWALL:Q8A7H8 (EMBL:AE016932) (335 FT aa) fasta scores: E(): 4e-91, 64.75% id in 332 aa, and to FT Streptomyces mycarofaciens acyltransferase MdmB FT SWALL:MDMB_STRMY (SWALL:Q00718) (387 aa) fasta scores: E(): FT 6.2e-14, 27.67% id in 318 aa" FT /db_xref="GOA:Q5LH29" FT /db_xref="InterPro:IPR002656" FT /db_xref="UniProtKB/TrEMBL:Q5LH29" FT /protein_id="CAH06557.1" FT /translation="MINTLTSLRFIFAIMVFGAHCYVIDNVFNTHFFKEGFVGVSFFFV FT LSGFIIAYNYQEKLKDNKIDKRSFWVARIARIYPLHWLTLFIAAILGSYVIASGTLDWL FT KHFLASLTLTNAYIPRADYFFSFNSPSWSLCCEQLFYICFPFLIPLAKNYKYLLSVFGI FT VAILMVVGMYFTPEDEIKGFWYVNPITRFPDFIVGMLLFQLYERLKNKNITALQGSIIE FT ISSIILFLIFYLYAADIPKVYRYSCYYWLPVAVILISFSLQKGIFSRILSNRFLVIGGE FT ISYSFYLIHLFVLLTYSEWQKENNLHTEWYISVPILFSIIILLSLLSYYYFEKPMNKRV FT KTLLNR" FT misc_feature complement(1005585..1006598) FT /note="Pfam match to entry PF01757 Acyl_transf_3, FT Acyltransferase family, score 111.9, E-value 1e-30" FT misc_feature complement(order(1005606..1005674,1005711..1005779, FT 1005816..1005878,1005891..1005950,1005987..1006055, FT 1006083..1006136,1006149..1006217,1006305..1006373, FT 1006436..1006491,1006523..1006587)) FT /note="9 probable transmembrane helices predicted for FT BF0813 by TMHMM2.0 at aa 5-27, 37-56, 77-99, 129-151, FT 156-173, 183-205, 218-237, 242-262, 275-297, 310-332" FT CDS complement(1006809..1007603) FT /transl_table=11 FT /locus_tag="BF9343_0777" FT /old_locus_tag="BF0814" FT /product="putative Sec-independent protein translocase FT component" FT /note="Similar to Campylobacter jejuni SEC-independent FT protein translocase protein TatC homolog or MttB or cj0578C FT SWALL:TATC_CAMJE (SWALL:Q9PHT8) (245 aa) fasta scores: E(): FT 7.9e-20, 28.68% id in 251 aa, and to Bacteroides FT thetaiotaomicron putative Sec-independent protein FT translocase BT4103 SWALL:AAO79208 (EMBL:AE016943) (273 aa) FT fasta scores: E(): 1.7e-97, 89.8% id in 255 aa, and to FT Heliobacillus mobilis Sec-independent protein translocase FT protein TatC SWALL:Q8GDT4 (EMBL:AY142890) (249 aa) fasta FT scores: E(): 1.5e-23, 33.97% id in 259 aa" FT /db_xref="GOA:Q5LH28" FT /db_xref="InterPro:IPR002033" FT /db_xref="InterPro:IPR019822" FT /db_xref="UniProtKB/TrEMBL:Q5LH28" FT /protein_id="CAH06558.1" FT /translation="MAEIKELTFWDHLDELRRVLFRIIGVWFVLAVGYFIAMPYLFDHV FT ILAPCHNDFIFYHLLRDIGQAFDLTDDFFTREFKVKLVNINLAAPFFIHMSTAFWMSVV FT TATPYLFFEIWRFIRPALYPNERKGVRKALTIGTVMFFIGVLLGYFMVYPLTLRFLSTY FT QLSAEIENQISLNSYIDNFMMLVLCMGLAFELPLVTWLLSLLGLVNKSFLRKYRRHAIV FT LIVIAAAVITPTGDPFTLSIVAIPLYLLYEMSILMIKDKNRS" FT misc_feature complement(1006866..1007552) FT /note="Pfam match to entry PF00902 TatC, Sec-independent FT protein translocase protein (TatC), score 175.3, E-value FT 8.5e-50" FT misc_feature complement(order(1006875..1006943,1006980..1007048, FT 1007139..1007207,1007268..1007336,1007478..1007546)) FT /note="5 probable transmembrane helices predicted for FT BF0814 by TMHMM2.0 at aa 20-42, 90-112, 133-155, 186-208 FT and 221-243" FT CDS complement(1007680..1007907) FT /transl_table=11 FT /locus_tag="BF9343_0778" FT /old_locus_tag="BF0815" FT /product="putative Sec-independent protein translocase FT component" FT /note="Similar to Campylobacter jejuni Sec-independent FT protein translocase protein TatA/E homolog TatA or CJ1176C FT SWALL:TATA_CAMJE (SWALL:Q9PNB9) (79 aa) fasta scores: E(): FT 8.1e-08, 47.82% id in 69 aa, and to Bacteroides FT thetaiotaomicron putative Sec-independent protein FT translocase BT4102 SWALL:AAO79207 (EMBL:AE016943) (73 aa) FT fasta scores: E(): 4.6e-20, 86.3% id in 73 aa, and to FT Chlorobium tepidum Sec-independent protein translocase FT protein TatE, putative CT1616 SWALL:Q8KC14 (EMBL:AE012916) FT (67 aa) fasta scores: E(): 2.9e-08, 51.42% id in 70 aa" FT /db_xref="GOA:Q5LH27" FT /db_xref="InterPro:IPR003369" FT /db_xref="InterPro:IPR006312" FT /db_xref="UniProtKB/TrEMBL:Q5LH27" FT /protein_id="CAH06559.1" FT /translation="MTNLFLLGFMPSGSEWIIILLVILLLFGGKKIPELMRGLGKGVKS FT FKEGVNEAKEEINKAKEEIDEPENKEKKDN" FT misc_feature complement(1007695..1007877) FT /note="Pfam match to entry PF02416 MttA_Hcf106, mttA/Hcf106 FT family, score 62.8, E-value 6.2e-16" FT misc_feature complement(1007827..1007895) FT /note="1 probable transmembrane helix predicted for BF0815 FT by TMHMM2.0 at aa 5-27" FT CDS complement(1008069..1010591) FT /transl_table=11 FT /locus_tag="BF9343_0779" FT /old_locus_tag="BF0816" FT /product="putative alanine racemase and FT UDP-N-acetylmuramoylalanyl-D-glutamyl, FT 6-diaminopimelate-D-alanyl-D-alanyl ligase fusion protein" FT /note="C-terminal region similar to Thermoanaerobacter FT tengcongensis alanine racemase 2 AlrR or TTE2168 FT SWALL:ALR2_THETN (SWALL:Q8R860) (388 aa) fasta scores: E(): FT 8.7e-39, 38.07% id in 373 aa, and to Bacteroides FT thetaiotaomicron alanine racemase BT4101 SWALL:Q8A0C0 FT (EMBL:AE016943) (773 aa) fasta scores: E(): 0, 86.53% id in FT 750 aa, and N-terminal region to Staphylococcus epidermidis FT UDP-N-acetylmuramoylalanyl-D-glutamyl-2, FT 6-diaminopimelate-D-alanyl-D-alanyl ligase SE1680 FT SWALL:Q8CNK5 (EMBL:AE016749) (451 aa) fasta scores: E(): FT 2.7e-24, 26.93% id in 427 aa" FT /db_xref="GOA:Q5LH26" FT /db_xref="InterPro:IPR000821" FT /db_xref="InterPro:IPR001608" FT /db_xref="InterPro:IPR004101" FT /db_xref="InterPro:IPR005863" FT /db_xref="InterPro:IPR009006" FT /db_xref="InterPro:IPR011079" FT /db_xref="InterPro:IPR013221" FT /db_xref="UniProtKB/TrEMBL:Q5LH26" FT /protein_id="CAH06560.1" FT /translation="MQICQCFNIMSYTIESIVEKIGARRLGNKPAAIDWLLTDSRSLCF FT PEETLFFAIPTKRNNGARYIPDLYERGVRNFVVTSEDFKGLTMDSEQLKVTMAQECNFL FT IVPNTLKALQKLAEQHRGSFQIPVVGITGSNGKTIVKEWLHQLLSPDRVIVRSPRSYNS FT QIGVPLSVWQMNEESELGIFEAGISEMGEMRPLQNMIKPTIGILTNIGGAHQENFFSLQ FT EKCMEKLSLFKDCDVVIYNGDNEMISNCVGKSMLTAREIAWSMRDIERPLYISRVEKKE FT DHTVISYRYLEMDNTFCIPFIDDASIENSLNCLAACLYLMVPADQITERMARLEPVAMR FT LEVKDGKNNCILINDSYNSDLASLDIALDFLYRRSQSKGLKRTLILSDILETGQSTTTL FT YRKVAQLVHSRGIEKIIGVGAEISSCASKFDIEKYFFPDTKALLASDVIKKLRNEIILI FT KGSRNFGFDLVSEELELKVHETILEVNLGAMVANLNHYRSMLKPETKMVCMVKASAYGA FT GSYEIAKTLQEHHADYLAVAVADEGSDLRKAGITASIIIMDPELTAFKTMFDYKLEPEV FT YNFHLLDALIKAAEKEGITNFPIHVKLDTGMHRLGFEEKDIPQLIRRLKNQNALIPRSV FT FSHFVGSDSAQFDAFTRQQIERYEKMSKELQDAFPHKILRHICNTAGIERFPGAQFDMV FT RLGIGLYGISPIDNSIINNVSTLKTTILQIRDVAEEDTVGYSRKGHLIRPSRIAAIPIG FT YADGLNRHLGCGHGYCLVNGKKAPYVGNICMDVCMIDVTDIDCREGDQAIIFGDELPIT FT VLSDALETIPYEVLTGISTRVKRVYYQD" FT misc_feature complement(1008078..1008452) FT /note="Pfam match to entry PF00842 Ala_racemase_C, Alanine FT racemase, C-terminal domain, score 166.8, E-value 3.1e-47" FT misc_feature complement(1008474..1009157) FT /note="Pfam match to entry PF01168 Ala_racemase_N, Alanine FT racemase, N-terminal domain, score 195.6, E-value 6.8e-56" FT misc_feature complement(1009320..1009583) FT /note="Pfam match to entry PF02875 Mur_ligase_C, Mur ligase FT family, glutamate ligase domain, score 10.9, E-value FT 0.0024" FT misc_feature complement(1009605..1010453) FT /note="Pfam match to entry PF01225 Mur_ligase, Mur ligase FT family, catalytic domain, score 47.2, E-value 3.2e-11" FT CDS complement(1010594..1011580) FT /transl_table=11 FT /locus_tag="BF9343_0780" FT /old_locus_tag="BF0817" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4100 SWALL:AAO79205 (EMBL:AE016943) (329 aa) FT fasta scores: E(): 9.4e-90, 67.27% id in 327 aa" FT /db_xref="InterPro:IPR014982" FT /db_xref="UniProtKB/TrEMBL:Q5LH25" FT /protein_id="CAH06561.1" FT /translation="MNLNTPVEIPSGFTPISHAQQLLIMGSCFAENIGTLLAENKFRID FT INPFGILYNPRSISMALREIISQKQYKASDLFLHRECWHSPMHHGSFSAATLADTLRNI FT QSRVEQAHKELKQLDRLMLTFGTAYVYEQKETGKVVANCHKLPEKNFIRRRLEIDEIVE FT DYTLLLDELISLNPQLKILFTVSPIRHIRDGMHANQLSKSVLLLAIDRLMQRYPQVTCY FT FPSYEIVLDELRDYRFYADDMVHPSTLTVNYLWERFSETFFTPETQSLIKECETIRKAI FT AHKPFHPESEEHKRFLGQIVLKIERLNGKYPYLDFEKETNMCRLALQ" FT misc_feature complement(1011497..1011529) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT repeat_region complement(1011753..1012262) FT /note="hit to rep1 4..513 score: 2352 percent id: 95.69" FT CDS complement(1012680..1013069) FT /transl_table=11 FT /locus_tag="BF9343_0781" FT /old_locus_tag="BF0818" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LH24" FT /protein_id="CAH06562.1" FT /translation="MGKPIIRILYFQRRGIDANGYYRLNYIIQRGRKILYYATETKDFE FT YSDCFTSSCLAERKETILDTAQYIFKVHKVRYSRLILSPSYSYITKYKSRIRQICTATR FT FCKSDIIWTMCPRSFIPISKIPFSF" FT CDS 1013494..1013859 FT /transl_table=11 FT /locus_tag="BF9343_0782" FT /old_locus_tag="BF0820" FT /product="putative regulatory protein" FT /note="Similar to Staphylococcus sciuri transcriptional FT regulator MecI protein SWALL:O54281 (EMBL:Y13095) (123 aa) FT fasta scores: E(): 2.2e-05, 28.44% id in 116 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT4198 SWALL:AAO79303 (EMBL:AE016944) (121 aa) fasta FT scores: E(): 3.4e-37, 82.64% id in 121 aa, and to FT Bacteroides thetaiotaomicron putative transcriptional FT regulator BT0635 SWALL:AAO75742 (EMBL:AE016928) (125 aa) FT fasta scores: E(): 5.5e-29, 61.15% id in 121 aa" FT /db_xref="GOA:Q5LH23" FT /db_xref="InterPro:IPR005650" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q5LH23" FT /protein_id="CAH06563.1" FT /translation="MKRLTAKEEEIMGFFWEKGPLFVKEILAFYDEPRPHFNTLSTIVR FT GLEEKGFLAHHTYGNTYQYYAVVSESDFSKRTLKSVISKYFNNSYLSAVSSLVKEEDIS FT LDDLKKLIQEVEQKNEE" FT CDS 1013875..1015437 FT /transl_table=11 FT /locus_tag="BF9343_0783" FT /old_locus_tag="BF0821" FT /product="conserved hypothetical transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4201 SWALL:AAO79306 (EMBL:AE016944) FT (813 aa) fasta scores: E(): 1.7e-84, 56.78% id in 472 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT4200 SWALL:AAO79305 (EMBL:AE016944) (710 aa) FT fasta scores: E(): 6.7e-61, 57.7% id in 454 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT4199 SWALL:AAO79304 (EMBL:AE016944) (538 aa) fasta FT scores: E(): 1.4e-40, 37.19% id in 492 aa" FT /db_xref="GOA:Q5LH22" FT /db_xref="InterPro:IPR008756" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="UniProtKB/TrEMBL:Q5LH22" FT /protein_id="CAH06564.1" FT /translation="MMGLFFVYIVKSSVCLAGFYLFYRLLLSKETFHRFNRIALLTLLL FT LSLLLPLVQLTTIEQTEVHQTMLTIEQLLMMADMPVSEVTPAEAVTLSGIQILLMVYLS FT GVLFFACRHIYSLGRLLMLLRSGEKEKMENGMTLVIHQQKISPFSWMKYIVISKVDLEE FT DGREILIHEAAHVRNRHSVDLLIADICIFFQWFNPASWLLKQELQNIHEYEADESVIRE FT GVNARQYQLLLIKKAVGTRLYSMANSFNHSKLKKRITMMLKEKSNPWARLKYLYVLPLA FT AIAVTAFARPEISGKMDEISAVKVNDFVQIVGTKVPEKKVEVLKDTVKKDAPKEEAFEV FT SRLETVPTHSKVTITDGMKRSGMDLFSVRNAGSQPQPLILVDGKEITGEQMQRDINPDM FT IESISVLKDEASTAIYGDKAKHGVILITLKGKDVQNVLSLSASDPEDGVKVVGVVKDHL FT DKPLAGASVFISGTVSGTMSDAYGRFVLLAPKNAMLRISYTGMTTVEKAVAPEVNVTLN FT PAD" FT misc_feature order(1013887..1013955,1013989..1014048,1014139..1014207, FT 1014673..1014741) FT /note="4 probable transmembrane helices predicted for FT BF0821 by TMHMM2.0 at aa 5-27, 39-58, 89-111 and 267-289" FT CDS 1015455..1015628 FT /transl_table=11 FT /locus_tag="BF9343_0784" FT /old_locus_tag="BF0822" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LH21" FT /protein_id="CAH06565.1" FT /translation="MLLPQTNVSKLTMEDKPSIPGRKDGKKRENIDLKELYQLYNEIDS FT YISQRYNELFGL" FT CDS 1015679..1017721 FT /transl_table=11 FT /locus_tag="BF9343_0785" FT /old_locus_tag="BF0823" FT /product="putative transmembrane protein" FT /note="is similar to C-terminus of Bacillus halodurans FT two-component sensor histidine kinase BH1199 SWALL:Q9KDL3 FT (EMBL:AP001511) (351 aa) fasta scores: E(): 1.9e-12, 31.47% FT id in 251 aa, and C-terminus of Pseudomonas putida sensory FT box histidine kinase PP0409 SWALL:AAN66039 (EMBL:AE016775) FT (795 aa) fasta scores: E(): 3.3e-12, 34.86% id in 218 aa, FT and C-terminus of Oceanobacillus iheyensis two-component FT sensor histidine kinase ob2823 SWALL:Q8EML9 (EMBL:AP004602) FT (350 aa) fasta scores: E(): 5.3e-12, 30.04% id in 253 aa" FT /db_xref="GOA:Q5LH20" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR011712" FT /db_xref="InterPro:IPR011990" FT /db_xref="UniProtKB/TrEMBL:Q5LH20" FT /protein_id="CAH06566.1" FT /translation="MKRLLSVFLFLFCCVIAADAQDDAAQYDSIMNLMKNKKIPLMERY FT YMTGDIEYLSREHQIAVLKQLIPEAKEVEDKAVITRLYSIVAMFENQLGHMTEAKNYLD FT SAFMNKGKFENNNISGMMHYIAGIYYSDKNLMEQAHENYYQAAEYFNRNEMKPAILTEI FT YYDLSIIYSMWQDDEGLHELSEAMKDLPVDFPFQQILKWTIKAKYFYALYQNEHRVDLL FT DSVTKYNQEAFKVYTSTENPYDVGYVISDNYLHQAIVYSEAGKIKEAEQCFETGKKLMN FT PKKIDANVSVSYVSGVIAYYQADYELAEQHLQDGLRELKRMDEEQEVDYYHALIEFYTL FT LAKVYEKQELYNKALEAARNSLKYETRLFDKNSNKTIQKLRTQYNLNEKERVVEQLSAI FT NEKNRRINILSAILIVLALVTIFLLLKRYRSRQRIHEGMLQIAKLKQQEAELLVKLQKT FT KLEEREREFQSLVHEAQQRKVQYYLEGLEVERKRLAKELHDNVSNELLAIKMKITDGTS FT SCEEIMDTLQTLQAEVRGISHDLMPPIFKYASLSEILQDYVYQHNQPGQTELELLLEPE FT DNFDNLSQKVSLEIYRIVQEAVGNSLKHAQATLVKIILVREDNKVKLTVSDNGRGFEQQ FT TGKTGIGLTIIKERVENLRGTLTLNSAPGKGTELIVEIDLENLEK" FT misc_feature 1015679..1015738 FT /note="Signal peptide predicted for BF0823 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.601 between residues 20 and 21" FT misc_feature 1016894..1016953 FT /note="1 probable transmembrane helix predicted for BF0823 FT by TMHMM2.0 at aa 406-425" FT misc_feature 1017431..1017706 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 93.9, FT E-value 2.8e-25" FT CDS complement(1017817..1018992) FT /transl_table=11 FT /locus_tag="BF9343_0786" FT /old_locus_tag="BF0824" FT /product="conserved hypothetical protein" FT /note="Limited similarity to Bacteroides thetaiotaomicron FT hypothetical protein BT0664 SWALL:AAO75771 (EMBL:AE016928) FT blast scores: E(): 0.005, score: 44 18% id" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LH19" FT /protein_id="CAH06567.1" FT /translation="MILVQILVKDLFNMIKKIFFSSFLLIIMFCGCMTQNEITGSVAKL FT ETVEKVVDDTLFLKNPQVFCLETKDNALIKRINRVIEWKNTYYILDKSMKQVLAFNDKG FT RHLFTIHRVGIGKGEYGSILDIAIDRQNENLVFLADPTSLIYYDLQGNFIKTTKLQGYY FT HSIAIDNGVTYLENATYINNQLSTSSITVIAPDNQKTELLKPLREIAPYCFIGGSRLNG FT TTPIVFTRKFDNTIYQLEDGKITPYYSFDFMNENFPEAAKDKEYTCRELNKFTWDRYVY FT LMANVANAPQYLMFSTNLFGVYVFDKTQNKLLKYNKIRNTGYQTDLHQYIPVEGANNRV FT FFTVYPTTLFSLKAIVDNHPSFKDKMSDKLYKLTESLDSDSNPVIFSYQIK" FT misc_feature complement(1018147..1018197) FT /note="PS00237 G-protein coupled receptors signature." FT CDS complement(1019290..1020195) FT /transl_table=11 FT /gene="miaA" FT /gene_synonym="trpX" FT /locus_tag="BF9343_0787" FT /old_locus_tag="BF0825" FT /product="putative tRNA delta(2)-isopentenylpyrophosphate FT transferase" FT /EC_number="2.5.1.8" FT /note="Similar to Escherichia coli tRNA FT delta(2)-isopentenylpyrophosphate transferase MiaA or TrpX FT or B4171 SWALL:MIAA_ECOLI (SWALL:P16384) (316 aa) fasta FT scores: E(): 8.4e-24, 29.23% id in 301 aa, and to FT Bacteroides thetaiotaomicron tRNA FT delta(2)-isopentenylpyrophosphate transferase BT4203 FT SWALL:AAO79308 (EMBL:AE016944) (308 aa) fasta scores: E(): FT 8e-91, 85.32% id in 293 aa, and to Bacillus subtilis tRNA FT delta(2)-isopentenylpyrophosphate transferase MiaA FT SWALL:MIAA_BACSU (SWALL:O31795) (314 aa) fasta scores: E(): FT 5.5e-32, 36.21% id in 312 aa" FT /db_xref="GOA:Q5LH18" FT /db_xref="InterPro:IPR002627" FT /db_xref="InterPro:IPR018022" FT /db_xref="UniProtKB/Swiss-Prot:Q5LH18" FT /protein_id="CAH06568.1" FT /translation="MTAKTLIVLIGPTGVGKTELSLRIAEYFKTSIISSDSRQLYAELK FT IGTAAPTPEQLKRVPHYFVGTLQLTDYYSAAQYETEVMSVLEQLFQQHHVVLLTGGSMM FT YVDAICKGIDDIPTVDAETRELLLHKYDTEGLDNLCAELKLLDPEYYKIVDLKNPKRVI FT HALEICYMTGKTYTSFRTQQKKERPFHILKIGLTRDRAELYDRINRRVDQMMDEGLLEE FT ARSVYAHRELNSLNTVGYKEIFKYLDGEWDLDFAIEKIKQNSRIYSRKQMTWFKRDEEI FT RWFHPEQEKEILSYLQASIK" FT misc_feature complement(1019335..1020084) FT /note="Pfam match to entry PF01715 IPPT, IPP transferase, FT score 232.4, E-value 5.5e-67" FT misc_feature complement(1020142..1020165) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(1020292..1020855) FT /transl_table=11 FT /locus_tag="BF9343_0788" FT /old_locus_tag="BF0826" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4204 SWALL:Q8A017 (EMBL:AE016944) FT (184 aa) fasta scores: E(): 1.4e-61, 85.56% id in 187 aa" FT /db_xref="InterPro:IPR012912" FT /db_xref="InterPro:IPR024047" FT /db_xref="UniProtKB/TrEMBL:Q5LH17" FT /protein_id="CAH06569.1" FT /translation="MIYRFTIISDEVDDFVREIQIDPEATFFDLHEAILKAANYTNDQM FT TSFFICDDDWEKEKEITLEEMDNNPEMDSWIMKETRLNELIEDEKQKLLYVFDYMTERC FT FFIELSEIITGKEIKGAKCTKKSGEAPKQTVDFEEMAAGGGSLDLDENFYGDQDFDMED FT FDAEGFDVNDGAAGGGSSYDEDKF" FT CDS complement(1020989..1021756) FT /transl_table=11 FT /gene="lpxA" FT /locus_tag="BF9343_0789" FT /old_locus_tag="BF0827" FT /product="putative FT acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine FT O-acyltransferase" FT /EC_number="2.3.1.129" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT and Shigella flexneri FT acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine FT O-acyltransferase LpxA or B0181 or c0218 or SF0171 or s0174 FT SWALL:LPXA_ECOLI (SWALL:P10440) (262 aa) fasta scores: E(): FT 6.5e-36, 42.2% id in 263 aa, and to Bacteroides FT thetaiotaomicron acyl-[acyl-carrier-protein]--UDP-N- FT acetylglucosamine O-acyltransferase BT4205 SWALL:AAO79310 FT (EMBL:AE016944) (255 aa) fasta scores: E(): 9.7e-89, 89.41% FT id in 255 aa, and to Bacteroides thetaiotaomicron FT UDP-N-acetylglucosamine acetyltransferase BT3336 FT SWALL:AAO78442 (EMBL:AE016940) (256 aa) fasta scores: E(): FT 3.8e-49, 50.78% id in 256 aa" FT /db_xref="GOA:Q5LH16" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR010137" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:Q5LH16" FT /protein_id="CAH06570.1" FT /translation="MISPLAYIHPEAKIGENVEIAPFVYIDRNVVIGDNNKIMANANIL FT YGSRIGNGNTIFPGAVIGAIPQDLKFKGEESTAEIGDNNLIRENVTINRGTAAKGRTIV FT GNNNLLMEGVHVAHDALIGNGCIVGNSTKMAGEIIIDDNAIISANVLMHQFCRVGGYVM FT IQGGCRFSKDIPPYIIAGREPIAYSGINIIGLRRRGFSNEIIENIHNAYRIIYQSGLNT FT SDALTKVEAEVPASPEIEYIVDFIRNSERGIIR" FT misc_feature complement(1021277..1021330) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 8.7, E-value FT 5.2" FT misc_feature complement(1021349..1021402) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 9.9, E-value FT 3.7" FT misc_feature complement(1021403..1021456) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 12.6, FT E-value 0.84" FT misc_feature complement(1021475..1021528) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 14.3, FT E-value 0.26" FT misc_feature complement(1021565..1021618) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 17.8, FT E-value 0.023" FT misc_feature complement(1021619..1021672) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 14.1, FT E-value 0.3" FT misc_feature complement(1021673..1021726) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 16.9, FT E-value 0.043" FT CDS complement(1021767..1023152) FT /transl_table=11 FT /gene="lpxC" FT /locus_tag="BF9343_0790" FT /old_locus_tag="BF0828" FT /product="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine FT deacetylase" FT /EC_number="3.5.1.-" FT /note="Similar to Ralstonia solanacearum FT UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine FT deacetylase LpxC or RSC2837 or RS00268 SWALL:LPXC_RALSO FT (SWALL:Q9KHL6) (305 aa) fasta scores: E(): 1.9e-23, 35.79% FT id in 338 aa, and to Bacteroides thetaiotaomicron FT UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine FT deacetylase BT4206 SWALL:AAO79311 (EMBL:AE016944) (461 aa) FT fasta scores: E(): 8.1e-169, 93.92% id in 461 aa, and to FT Chlorobium tepidum UDP-3-O-3-hydroxymyristoyl FT N-acetylglucosamine deacetylase/ LpxC/FabZ or CT1662 FT SWALL:Q8KBX0 (EMBL:AE012921) (467 aa) fasta scores: E(): FT 1.3e-72, 42.91% id in 466 aa" FT /db_xref="GOA:Q5LH15" FT /db_xref="InterPro:IPR004463" FT /db_xref="InterPro:IPR010084" FT /db_xref="InterPro:IPR011334" FT /db_xref="InterPro:IPR013114" FT /db_xref="InterPro:IPR015870" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:Q5LH15" FT /protein_id="CAH06571.1" FT /translation="MLKQKTLKESFSLRGKGLHTGLDLTVTFNPAPDNHGYKIQRTDLE FT GQPIIDAVADNVGETTRGTVLSKNGVKVSTVEHGMAALYALGIDNCLIQVNGPEFPILD FT GSAQYYVQEIEKVGIEEQNAVKDFYIIKSKIEFRDEETGSSIIVLPDENFSLNVLVSYD FT STIIPNQFATLEDMKKFKDEIAPSRTFVFVREIEPLLSAGLIKGGDLDNAIVIYEREMS FT QENYDKLADVMRVPHMDAKLLGYINHKPLVWPNECARHKLLDVIGDLALIGKPIKGRII FT ATRPGHTINNKFARQMRKEIRLHEIQAPTYDCNRAPIMDVNRIRELLPHRYPFQLVDKV FT IEIGANYIVGVKNVTSNEPFFQGHFPQEPVMPGVLQIEAMAQIGGLLVLNSVDEPERYS FT TYFMKIDGVKFRQKVVPGDTLIFRVELLAPIRRGISTMKGYAFVGEKVVCECEFMAQIV FT KNK" FT misc_feature complement(1021800..1022099) FT /note="Pfam match to entry PF03061 4HBT, Thioesterase FT superfamily, score 67.0, E-value 3.3e-17" FT misc_feature complement(1022247..1023149) FT /note="Pfam match to entry PF03331 LpxC, UDP-3-O-acyl FT N-acetylglycosamine deacetylase, score 260.4, E-value FT 2.1e-75" FT CDS complement(1023156..1024196) FT /transl_table=11 FT /gene="lpxD" FT /gene_synonym="firA" FT /locus_tag="BF9343_0791" FT /old_locus_tag="BF0829" FT /product="putative UDP-3-O-[3-hydroxymyristoyl] glucosamine FT N-acyltransferase" FT /EC_number="2.3.1.-" FT /note="Similar to Rickettsia rickettsii FT UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase FT LpxD or FirA SWALL:LPXD_RICRI (SWALL:P32202) (345 aa) fasta FT scores: E(): 1.3e-37, 39.67% id in 305 aa, and to FT Bacteroides thetaiotaomicron UDP-3-O-[3-hydroxymyristoyl] FT glucosamine N-acyltransferase BT4207 SWALL:AAO79312 FT (EMBL:AE016944) (346 aa) fasta scores: E(): 2.1e-104, FT 79.19% id in 346 aa, and to Chlorobium tepidum FT UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase FT LpxD or CT1360 SWALL:LPXD_CHLTE (SWALL:Q8KCQ3) (353 aa) FT fasta scores: E(): 2.4e-41, 39.52% id in 339 aa" FT /db_xref="GOA:Q5LH14" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR007691" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR020573" FT /db_xref="UniProtKB/Swiss-Prot:Q5LH14" FT /protein_id="CAH06572.1" FT /translation="MEFSAKQIAAFIQGEIIGDENATVHTFAKIEEGIPGAISFLSNPK FT YTPYIYETKASIVLVNKDFTPEQEVKATLIKVDNAYESLAKLLNLYEMSKPKRTGIDER FT AYVAETAKIGKDVYIAPFACIGDHAEVGDNTVIHPHATVGGGAKIGSNCILYANSTVYH FT DCRVGNNCILHAGCVIGADGFGFAPTPQGYEKIPQIGIVILEDNVEVGANTCIDRATMG FT ATVIHSGVKLDNLVQIAHNDEIGSHTVMAAQVGIAGSTKVGEWCMFGGQVGIAGHLKIG FT NQVNLGAQSGVPGNIKSGSQLIGTPPMELKQFFKASIVQKSLPEMQIELRNLRKEIEEL FT KQQLNK" FT misc_feature complement(1023315..1023368) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 2.5, E-value FT 32" FT misc_feature complement(1023369..1023422) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 8.6, E-value FT 5.4" FT misc_feature complement(1023477..1023530) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 6.2, E-value FT 11" FT misc_feature complement(1023543..1023596) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 9.2, E-value FT 4.6" FT misc_feature complement(1023654..1023707) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 22.4, FT E-value 0.0009" FT misc_feature complement(1023708..1023761) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 17.6, FT E-value 0.026" FT misc_feature complement(1023762..1023815) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 22.5, FT E-value 0.00084" FT misc_feature complement(1023816..1023869) FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 17.4, FT E-value 0.028" FT misc_feature complement(1023888..1024190) FT /note="Pfam match to entry PF04613 LpxD, FT UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, FT LpxD, score 63.0, E-value 5.5e-16" FT CDS complement(1024279..1025508) FT /transl_table=11 FT /locus_tag="BF9343_0792" FT /old_locus_tag="BF0830" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron FT phosphohydrolase BT4208 SWALL:AAO79313 (EMBL:AE016944) (409 FT aa) fasta scores: E(): 3e-145, 91.93% id in 409 aa, and to FT Streptococcus mutans conserved hypothetical protein FT SMU.719C SWALL:Q8DV05 (EMBL:AE014915) (434 aa) fasta FT scores: E(): 1.7e-34, 31.41% id in 417 aa, and to Listeria FT innocua hypothetical protein Lin2710 SWALL:Q927S8 FT (EMBL:AL596173) (440 aa) fasta scores: E(): 8.2e-34, 30.93% FT id in 417 aa" FT /db_xref="GOA:Q5LH13" FT /db_xref="InterPro:IPR003607" FT /db_xref="InterPro:IPR006674" FT /db_xref="InterPro:IPR023279" FT /db_xref="UniProtKB/TrEMBL:Q5LH13" FT /protein_id="CAH06573.1" FT /translation="MPHERKIINDPVFGFINIPKGLLYDIVRHPLLQRLNRIKQVGLSS FT VVYPGAQHTRFQHSLGAFYLMSEAITQLASKGNFIFDSEAEAVQAAILLHDIGHGPFSH FT VLEDTIVKGVSHEEISLMLMERMNREMNGQLSLAIQIFKDEYPKRFLHQLVSGQLDMDR FT LDYLRRDSFYTGVSEGNIGSARIIKMLDVADDHLVVESKGIYSIENFLTARRLMYWQVY FT LHKTSVAYERMLISALLRAKELASKGVELFASPALKFFLYNHIDPEVFYNNPDCLENFI FT QLDDNDIWTALKVWSTHTDKVLSTLSLGMINRNIFKVEICSEPISEERKKELTLLISRQ FT LGITLSEADYFVSTPSIEKNMYDSADDSIDIIYKDGTIKNIAEASDMLNISLLSKKVKK FT YYICYLRWDR" FT misc_feature complement(1024999..1025346) FT /note="Pfam match to entry PF01966 HD, HD domain, score FT 22.4, E-value 0.00021" FT CDS complement(1025508..1026332) FT /transl_table=11 FT /locus_tag="BF9343_0793" FT /old_locus_tag="BF0831" FT /product="putative orotidine 5'-phosphate decarboxylase" FT /note="Similar to Trypanosoma cruzi OMPdcase-oprtase Pyr6-5 FT SWALL:O76139 (EMBL:AB010285) (458 aa) fasta scores: E(): FT 5.2e-28, 38.46% id in 260 aa, and to Bacteroides FT thetaiotaomicron orotidine 5'-phosphate decarboxylase FT BT4209 SWALL:AAO79314 (EMBL:AE016944) (274 aa) fasta FT scores: E(): 1.4e-102, 93.43% id in 274 aa, and to FT Leptospira interrogans orotidine-5'-monophosphate FT decarboxylase PyrF or LB310 SWALL:Q8EXA4 (EMBL:AE011617) FT (275 aa) fasta scores: E(): 7.1e-37, 42.8% id in 271 aa" FT /db_xref="GOA:Q5LH12" FT /db_xref="HSSP:2FDS" FT /db_xref="InterPro:IPR001754" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR011995" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:Q5LH12" FT /protein_id="CAH06574.1" FT /translation="MNKQSLFENIKRKKSFLCVGLDTDIKKIPDHLLDDPDPIFAFNKA FT IVDATADYCIAYKPNLAFYESMGVKGWIAFEKTVNYIKENYPDQFIIADAKRGDIGNTS FT AMYARTFFEELDIDSVTVAPYMGEDSVTPFLSYEGKWVILLALTSNKGSHDFQLTEDAN FT GERLFEKVLKKSQEWANDEQMMYVVGATQGRAFEDIRKIVPNHFLLVPGIGAQGGSLEE FT VCKYGMNSTCGLIVNSSRGIIYVDKTENFAAAARAAAKEVQEQMAEQLKAIL" FT misc_feature complement(1025559..1026290) FT /note="Pfam match to entry PF00215 OMPdecase, Orotidine FT 5'-phosphate decarboxylase / HUMPS family, score 98.3, FT E-value 1.3e-26" FT CDS complement(1026381..1027493) FT /transl_table=11 FT /gene="prfA" FT /locus_tag="BF9343_0794" FT /old_locus_tag="BF0832" FT /product="putative peptide chain release factor 1" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT Escherichia coli O157:H7, and Shigella flexneri peptide FT chain release factor 1 SWALL:RF1_ECOLI (SWALL:P07011) (360 FT aa) fasta scores: E(): 1.4e-57, 47.64% id in 361 aa, and to FT Bacteroides thetaiotaomicron peptide chain release factor 1 FT PrfA or BT4210 SWALL:AAO79315 (EMBL:AE016944) (370 aa) FT fasta scores: E(): 5.4e-128, 95.13% id in 370 aa, and to FT Pseudomonas putida peptide chain release factor 1 PrfA or FT PP0733 SWALL:AAN66358 (EMBL:AE016776) (360 aa) fasta FT scores: E(): 8.1e-61, 49.58% id in 361 aa" FT /db_xref="GOA:Q5LH11" FT /db_xref="HSSP:1RQ0" FT /db_xref="InterPro:IPR000352" FT /db_xref="InterPro:IPR004373" FT /db_xref="InterPro:IPR005139" FT /db_xref="UniProtKB/Swiss-Prot:Q5LH11" FT /protein_id="CAH06575.1" FT /translation="MADNNSILEKLDGLVARFEEVSTLITDPAVIADQKRYVKLTKEYK FT ELDDLMKARKEYMQLLANIEEAKDILSNESDADMREMAKEEMDNSQERLPVLEEEIKLL FT LVPADPQDGKNAILEIRGGTGGDEAAIFAGDLFRMYAKFCETKGWKMEVSSANEGAAGG FT YKEIICSVTGDNVYGTLKYESGVHRVQRVPATETQGRVHTSAASVAVLPEAEEFDVVIN FT EGEIKWDTFRSGGAGGQNVNKVESGVRLRYIWKNPNTGVAEEILIECTETRDQPKNKER FT ALARLRTFIYDKEHQKYIDDIASKRKTMVSTGDRSAKIRTYNYPQGRITDHRINYTIYN FT LAAFMDGDIQECIDKLTVAENAERLKESEL" FT misc_feature complement(1026495..1026860) FT /note="Pfam match to entry PF00472 RF-1, Peptidyl-tRNA FT hydrolase domain, score 154.2, E-value 1.9e-43" FT misc_feature complement(1026945..1027292) FT /note="Pfam match to entry PF03462 PCRF, PCRF domain, score FT 203.7, E-value 2.3e-58" FT CDS complement(1027557..1028723) FT /transl_table=11 FT /locus_tag="BF9343_0795" FT /old_locus_tag="BF0833" FT /product="possible phosphoribosylformylglycinamidine FT cyclo-ligase" FT /note="Similar to Bacillus subtilis FT phosphoribosylformylglycinamidine cyclo-ligase PurM or Ath FT SWALL:PUR5_BACSU (SWALL:P12043) (346 aa) fasta scores: E(): FT 0.0001, 25.15% id in 330 aa, and to Bacteroides FT thetaiotaomicron putative phosphoribosylformylglycinamidine FT cyclo-ligase BT4211 SWALL:AAO79316 (EMBL:AE016944) (388 aa) FT fasta scores: E(): 6.6e-143, 95.87% id in 388 aa, and to FT Methanococcus jannaschii probable FT phosphoribosylformylglycinamidine cyclo-ligase PurM or FT mj0203 SWALL:PUR5_METJA (SWALL:Q57656) (350 aa) fasta FT scores: E(): 1.8e-07, 31.13% id in 379 aa" FT /db_xref="GOA:Q5LH10" FT /db_xref="InterPro:IPR010918" FT /db_xref="InterPro:IPR016188" FT /db_xref="UniProtKB/TrEMBL:Q5LH10" FT /protein_id="CAH06576.1" FT /translation="MSNQRYMMRGVSASKEDVHNAIKNIDKGIFPQAFCKIIPDILGGD FT PEYCNIMHADGAGTKSSLAYMYWKETGDLSVWKGIAQDALIMNIDDLLCVGAVDNILVS FT STIGRNKLLIPGEVISAIINGTDELLAELREMGVGVYATGGETADVGDLVRTIIVDSTV FT TCRMKRADIINNANIRPGDVIVGLASHGQATYEKEYNGGMGSNGLTSARHDVFAKYLAE FT KYPESYDAAVPEELVYSGGLKLTDTVEGSPIDAGKLVLSPTRTYAPVVKKLLDALRPEI FT HGMVHCSGGAQTKVLHFVGDVRVVKDNLFPVPPLFRTIQEQSGTDWAEMYKVFNMGHRL FT EVYLSPEHAAEVIAISDSFGIPAQIVGRIEESDKKELIIKSEFGEFRY" FT misc_feature complement(1027584..1028189) FT /note="Pfam match to entry PF02769 AIRS_C, AIR synthase FT related protein, C-terminal domain, score 21.1, E-value FT 0.00016" FT CDS complement(1028938..1029171) FT /transl_table=11 FT /locus_tag="BF9343_0796" FT /old_locus_tag="BF0834" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LH09" FT /protein_id="CAH06577.1" FT /translation="MALVDHDTRQESGDFYIPTFFIFLLKPISGPVIFVTYNFDRKVAS FT TQDINYKTKYFFVYIPKAAVENLFQAATKVHL" FT misc_feature complement(1029061..1029129) FT /note="1 probable transmembrane helix predicted for BF0834 FT by TMHMM2.0 at aa 15-37" FT CDS complement(1029309..1029890) FT /transl_table=11 FT /locus_tag="BF9343_0797" FT /old_locus_tag="BF0835" FT /product="putative LemA family protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4212 SWALL:AAO79317 (EMBL:AE016944) FT (193 aa) fasta scores: E(): 6.2e-58, 87.04% id in 193 aa, FT and to Pasteurella multocida hypothetical protein Pm0785 FT SWALL:Q9CMN2 (EMBL:AE006117) (193 aa) fasta scores: E(): FT 5.6e-35, 57.51% id in 193 aa, and to Pasteurella multocida FT p70 SWALL:Q8VPL2 (EMBL:AY035341) (193 aa) fasta scores: FT E(): 1.4e-34, 55.67% id in 194 aa" FT /db_xref="InterPro:IPR007156" FT /db_xref="InterPro:IPR023353" FT /db_xref="UniProtKB/TrEMBL:Q5LH08" FT /protein_id="CAH06578.1" FT /translation="MKKSVIILIAVVAVIIIWAISAYNGLVSMDENVSSQWANVETQYQ FT RRADLIPNLVNTVKGYASHEKETLEGVVEARSKATQIKVDANDLTPEKLAEYQKAQGAV FT TSALGKLLAITENYPDLKANQNFLELQAQLEGTENRINVARKNFNDAAQAYNTSIRRFP FT KSIFASVFGFEKRTYFEAAEGTEKAPEVKF" FT misc_feature complement(1029312..1029890) FT /note="Pfam match to entry PF04011 LemA, LemA family, score FT 350.7, E-value 1.4e-102" FT misc_feature complement(1029810..1029878) FT /note="1 probable transmembrane helix predicted for BF0835 FT by TMHMM2.0 at aa 5-27" FT CDS complement(1029985..1030905) FT /transl_table=11 FT /locus_tag="BF9343_0798" FT /old_locus_tag="BF0836" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4213 SWALL:AAO79318 (EMBL:AE016944) FT (300 aa) fasta scores: E(): 5.4e-71, 70.77% id in 308 aa, FT and to Xanthomonas axonopodis glycine rich protein XAC0839 FT SWALL:Q8PP49 (EMBL:AE011716) (286 aa) fasta scores: E(): FT 1.9e-13, 29.92% id in 274 aa, and to Xanthomonas campestris FT glycine rich protein XCC0784 SWALL:Q8PCF0 (EMBL:AE012178) FT (305 aa) fasta scores: E(): 2.5e-13, 27.98% id in 268 aa" FT /db_xref="InterPro:IPR007621" FT /db_xref="UniProtKB/TrEMBL:Q5LH07" FT /protein_id="CAH06579.1" FT /translation="MKQILTYLLFIWILLPLKAEEKIYTVDNIPKVHLQNKMQYVCNPA FT GILSQQACDEIDAMLYALEQQTGIETVVAIVPSVGDKDCFEFSHQLLNQWGVGKKGKDN FT GLVILLVTDQRCIQFYTGYGLEGILPDAICKRIQMQEMIPYLKKGEWNQGMLAGVKAVC FT QRLDGSMVNDDEGRGEEGISVSMLLVVILGFITIAGVVGILAVRASTRCPKCGKHQLQR FT SSTKLISNRNGVKTEDIIYTCRNCGHTVVRRQQSYDDNYRGRGGGGPFIGGFGGGSFGS FT GGGGGFSGGSFGGGSGGGGGAGSRF" FT misc_feature complement(1030288..1030356) FT /note="1 probable transmembrane helix predicted for BF0836 FT by TMHMM2.0 at aa 184-206" FT misc_feature complement(1030435..1030683) FT /note="Pfam match to entry PF04536 DUF477, Protein of FT unknown function (DUF477), score 68.8, E-value 9.5e-18" FT CDS complement(1030907..1031857) FT /transl_table=11 FT /locus_tag="BF9343_0799" FT /old_locus_tag="BF0837" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4214 SWALL:Q8A007 (EMBL:AE016944) FT (290 aa) fasta scores: E(): 1.8e-103, 81.72% id in 290 aa, FT and to Lactobacillus plantarum cell surface hydrolase, FT membrane-bound LP_3393 SWALL:Q88SL7 (EMBL:AL935262) (312 FT aa) fasta scores: E(): 4.6e-44, 40.31% id in 315 aa, and to FT Enterococcus faecalis hypothetical protein ef1536 FT SWALL:Q834U6 (EMBL:AE016951) (309 aa) fasta scores: E(): FT 1.8e-41, 38.41% id in 315 aa. Possible alternative start FT site at codon 28" FT /db_xref="UniProtKB/TrEMBL:Q5LH06" FT /protein_id="CAH06580.1" FT /translation="MKKGIKIGVITLLLLLTGCTIGGSFFMLNYSLRPEAKIRAKNADS FT YPFMYKNYPFLRPWVDSLNQAHALRDTFVLNPEGIRLHAYYIAAPQPTKKTAVIVHGYT FT DNAIRMFMIGYLYNHDLQYNVLLPDLQHQGESGGPAIQMGWKDRLDVMQWMHIANQIYG FT DSTQMVVHGISMGGATTMMVSGEAQPYFVKCFVEDCGYTSVWDEFSHELKSSFHLPSFP FT LMNTTSWLCQKKYGWNFEEASSLNQVKKSHLPMFFIHGDKDTYVPTWMVYPLYEAKSAP FT KQLWIVPGAAHAVSYKENKEEYTRKVKEFTDRYIH" FT misc_feature complement(1031773..1031837) FT /note="1 probable transmembrane helix predicted for BF0837 FT by TMHMM2.0 at aa 7-29" FT misc_feature complement(1031792..1031855) FT /note="Signal peptide predicted for BF0837 by SignalP 2.0 FT HMM (Signal peptide probability 0.964) with cleavage site FT probability 0.356 between residues 22 and 23" FT CDS complement(1031858..1032601) FT /transl_table=11 FT /gene="aroE" FT /locus_tag="BF9343_0800" FT /old_locus_tag="BF0838" FT /product="putative shikimate 5-dehydrogenase" FT /EC_number="1.1.1.25" FT /note="Similar to Staphylococcus epidermidis shikimate FT 5-dehydrogenase AroE or se1282 SWALL:Q8CP09 (EMBL:AE016748) FT (272 aa) fasta scores: E(): 5e-17, 29.96% id in 257 aa, and FT to Bacteroides thetaiotaomicron shikimate 5-dehydrogenase FT BT4215 SWALL:AAO79320 (EMBL:AE016944) (248 aa) fasta FT scores: E(): 3.9e-85, 88.3% id in 248 aa, and to Aquifex FT aeolicus shikimate 5-dehydrogenase AroE or AQ_901 FT SWALL:AROE_AQUAE (SWALL:O67049) (269 aa) fasta scores: E(): FT 6.3e-23, 38.76% id in 258 aa" FT /db_xref="GOA:Q5LH05" FT /db_xref="InterPro:IPR013708" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q5LH05" FT /protein_id="CAH06581.1" FT /translation="MQKYGLIGYPLKHSFSIGFFNEKFKSEGIDAEYVNFEIPEINDFM FT EVIEENPNLCGLNVTIPYKEQVIPFLDELDKDTAKIGAVNVIKIIRTPKRKIKLVGYNS FT DIIGFSQSIQPLLQPYHKKALILGTGGSSKAIYHGLKNLGIDSVFVSRTKKEGMLTYEE FT LTPEVMAEHTVIVNCTPVGMYPKVDFCPAIPYELLTPNHLLYDLLYNPNITLFMKKGEE FT HGAVTKNGLEMLLLQAFAAWEIWNK" FT misc_feature complement(1031861..1032547) FT /note="Pfam match to entry PF01488 Shikimate_DH, Shikimate FT / quinate 5-dehydrogenase, score 159.5, E-value 4.9e-45" FT CDS complement(1032628..1033365) FT /transl_table=11 FT /locus_tag="BF9343_0801" FT /old_locus_tag="BF0839" FT /product="putative ubiquinone/menaquinone biosynthesis FT methyltransferase" FT /note="Similar to Escherichia coli, Escherichia coli FT O157:H7, and Shigella flexneri ubiquinone/menaquinone FT biosynthesis methyltransferase UbiE or B3833 or Z5355 or FT ECS4763 or SF3911 or s3843 SWALL:UBIE_ECOLI (SWALL:P27851) FT (251 aa) fasta scores: E(): 9.6e-27, 35.49% id in 231 aa, FT and to Bacteroides thetaiotaomicron ubiquinone/menaquinone FT biosynthesis methyltransferase BT4216 SWALL:AAO79321 FT (EMBL:AE016944) (245 aa) fasta scores: E(): 3.9e-83, 86.93% FT id in 245 aa, and to Deinococcus radiodurans FT ubiquinone/menaquinone biosynthesis methyltransferase FT dr2405 SWALL:Q9RRT0 (EMBL:AE002071) (241 aa) fasta scores: FT E(): 1.5e-31, 41.07% id in 241 aa" FT /db_xref="GOA:Q5LH04" FT /db_xref="InterPro:IPR004033" FT /db_xref="InterPro:IPR023576" FT /db_xref="UniProtKB/Swiss-Prot:Q5LH04" FT /protein_id="CAH06582.1" FT /translation="MNYPQEKIKPYSNDGKKSEQVEQMFDNIAPAYDQLNHTLSLGIDR FT SWRRKAINWLKPFRPQQIMDVATGTGDFAILACHELQPEQLIGTDISEGMMNVGREKVK FT KEGLSEKISFAREDCTSLSFADNRFDAITVAFGIRNFEDLDKGLSEMYRVLKTGGHLVI FT LELTTPDRFPMKQMFTIYSKIVIPTLGKLLSKDNSAYSYLPQTIKAFPQGEVMKNVISR FT VGFSQVQFRRLTFGICTLYTATK" FT misc_feature complement(1032631..1033329) FT /note="Pfam match to entry PF01209 Ubie_methyltran, FT ubiE/COQ5 methyltransferase family, score 207.7, E-value FT 1.5e-59" FT CDS complement(1033487..1034431) FT /transl_table=11 FT /locus_tag="BF9343_0802" FT /old_locus_tag="BF0840" FT /product="putative succinoaminoimidazolecarboximide FT ribonucleotide (SAICAR) synthetase" FT /EC_number="6.3.2.6" FT /note="Similar to Vigna unguiculata FT succinoaminoimidazolecarboximide ribonucleotide synthetase FT Pur7 SWALL:Q8VZW9 (EMBL:AY063233) (402 aa) fasta scores: FT E(): 3.2e-43, 44.02% id in 318 aa, and to Bacteroides FT thetaiotaomicron FT phosphoribosylamidoimidazole-succinocarboxamide synthase FT BT4217 SWALL:AAO79322 (EMBL:AE016944) (314 aa) fasta FT scores: E(): 2.3e-116, 94.26% id in 314 aa, and to FT Caulobacter crescentus FT phosphoribosylaminoimidazole-succinocarboxamide synthase FT CC3242 SWALL:Q9A3G2 (EMBL:AE005988) (320 aa) fasta scores: FT E(): 7.8e-48, 46.77% id in 310 aa" FT /db_xref="GOA:Q5LH03" FT /db_xref="HSSP:1OBD" FT /db_xref="InterPro:IPR001636" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR018236" FT /db_xref="UniProtKB/Swiss-Prot:Q5LH03" FT /protein_id="CAH06583.1" FT /translation="MKALTKTDFNFPGQKSVYHGKVRDVYNINGEQLVMVATDRISAFD FT VVLPEGIPYKGQMLNQIAAKFLDATTDICPNWKLATPDPMVTVGVLCEGFPVEMIVRGY FT LCGSAWRAYKNGVREICGVKLPEGMKENQKFPEPIVTPTTKAEMGLHDEDISKEEILAQ FT GLATPEEYAILEKYTLALFKRGTEIAAERGLILVDTKYEFGKHNGTIYLMDEIHTPDSS FT RYFYAEGYQERFEKGEAQKQLSKEFVREWLMENGFQGKEGQKVPEMTPAIVESISERYI FT ELFENITGEKFVKEDTSNIAERIEKNVMAFLAK" FT misc_feature complement(1033625..1034395) FT /note="Pfam match to entry PF01259 SAICAR_synt, SAICAR FT synthetase, score 269.5, E-value 3.7e-78" FT misc_feature complement(1033820..1033846) FT /note="PS01058 SAICAR synthetase signature 2." FT CDS complement(1034451..1035464) FT /transl_table=11 FT /locus_tag="BF9343_0803" FT /old_locus_tag="BF0841" FT /product="putative phosphate starvation-inducible PhoH-like FT protein" FT /note="Similar to Bacillus subtilis PhoH-like protein PhoH FT SWALL:PHOL_BACSU (SWALL:P46343) (319 aa) fasta scores: E(): FT 1.6e-41, 48.27% id in 319 aa, and to Bacteroides FT thetaiotaomicron phosphate starvation-inducible protein, FT PhoH BT4218 SWALL:AAO79323 (EMBL:AE016944) (338 aa) fasta FT scores: E(): 2.3e-103, 96.37% id in 331 aa, and to FT Chlorobium tepidum PhoH family protein CT1259 SWALL:Q8KCZ8 FT (EMBL:AE012886) (329 aa) fasta scores: E(): 2e-47, 49.69% FT id in 326 aa" FT /db_xref="GOA:Q5LH02" FT /db_xref="InterPro:IPR003714" FT /db_xref="UniProtKB/TrEMBL:Q5LH02" FT /protein_id="CAH06584.1" FT /translation="MIEKLIVLEDIDPVIFYGVNNANIQLIKALYPKLRIVARGNVIKV FT LGDEEEMCAFEENITKLEKYCAEYNSLKEEVIIDIIKGNAPQAEKAGNVIVFSVTGKPI FT IPRSENQLKLVEGFAKNDMVFAIGPAGSGKTYTAIALAVRALKNKEIKKIILSRPAVEA FT GEKLGFLPGDMKDKIDPYLQPLYDALQDMIPAAKLKEYMELNIIQIAPLAFMRGRTLND FT AVVILDEAQNTTTQQIKMFLTRMGMNTKMIITGDMTQIDLPASQTSGLVQALRILKGVK FT GISFVELNKKDIVRHKLVERIVDAYEKFDKEKKAEREKLNGERLTISKERQNVGNL" FT misc_feature complement(1034544..1035458) FT /note="Pfam match to entry PF02562 PhoH, PhoH-like protein, FT score 403.6, E-value 1.7e-118" FT misc_feature complement(1034601..1034624) FT /note="PS00030 Eukaryotic putative RNA-binding region RNP-1 FT signature." FT misc_feature complement(1035060..1035083) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 1035629..1036309 FT /transl_table=11 FT /locus_tag="BF9343_0804" FT /old_locus_tag="BF0842" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4219 SWALL:AAO79324 (EMBL:AE016944) (225 aa) FT fasta scores: E(): 1.5e-64, 74.89% id in 227 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LH01" FT /protein_id="CAH06585.1" FT /translation="MNQSKCRSHFVISIFLCFILPCLAGCKKKDMSLKLNEPRNIKGVV FT SYKRSFGDLNDVQLKAAHAWGIAPLASREEAEEMDGKLVHIVDNDFYVVDSLTHSIPYL FT VPRASALLDTIGANFLDSLTAKGLNPNKIIVTSVLRTENDVKRLRRRNGNASKNSCHFY FT GTTFDVSWKRFKKVEDEDGRPLQDVSADTLKLVLAEVLRDVRKADKCYVKYELKQGCFH FT ITTR" FT misc_feature 1035647..1035703 FT /note="1 probable transmembrane helix predicted for BF0842 FT by TMHMM2.0 at aa 7-25" FT CDS complement(1036393..1038018) FT /transl_table=11 FT /locus_tag="BF9343_0805" FT /old_locus_tag="BF0843" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron FT flotillin-like protein BT4220 SWALL:AAO79325 FT (EMBL:AE016944) (552 aa) fasta scores: E(): 2e-138, 94.6% FT id in 537 aa, and to Lactococcus lactis flotillin-like FT protein FloL or ll0739 SWALL:Q9CHJ2 (EMBL:AE006307) (503 FT aa) fasta scores: E(): 5.4e-19, 30.79% id in 526 aa, and to FT Bacillus subtilis hypothetical protein YuaG FT SWALL:YUAG_BACSU (SWALL:O32076) (509 aa) fasta scores: E(): FT 1.2e-15, 27.72% id in 541 aa" FT /db_xref="InterPro:IPR001107" FT /db_xref="UniProtKB/TrEMBL:Q5LH00" FT /protein_id="CAH06586.1" FT /translation="MTQEMMIMAAILVAVILITFIGILSRYRKCKSDEVLVVYGKTGGD FT KKSAKLYHGGAAFVWPIVQGYEFLSMKPMQIDCKLTGALSAQNIRVDVPTTITVAISTD FT PEVMQNAAERMLGLTMDDKQNLITDVVYGQMRLVIADMTIEELNSDRDKFLSKVKDNID FT TELRKFGLYLMNINISDIRDAANYIVNLGKEAESKAQNEAQANIEEQEKLGAIKIANQI FT KERETKVAETRKDQDIAIAETKKLQEISVANADKDRISQVAIANAEKESQVAKAEAEKN FT IRIEQANTEKESRIAELNSDMEIKQAEAQKKAAIGRNEAQKEIALSNSELAVTQANADK FT QAGEASAKSEAAVQTAKEIAQKEVEEAKARKVESSLKAEKIVPAEVARQEAILQAEAVA FT EKITREAEARAKATLAQAEAEAKAIQLKLEAEAEGKKRSLLAEAEGFEAMVKAAESNPA FT IAIQYKMVDQWKEIAGEQVKAFEHINLGNITVFDGGNGGTSNFLNTLVKTVAPSLGVLD FT KLPIGETVKNMIHPEEKKEETEKK" FT misc_feature complement(1037383..1037943) FT /note="Pfam match to entry PF01145 Band_7, SPFH domain / FT Band 7 family, score 58.6, E-value 1.2e-14" FT misc_feature complement(1037947..1038000) FT /note="1 probable transmembrane helix predicted for BF0843 FT by TMHMM2.0 at aa 7-24" FT CDS complement(1038043..1038540) FT /transl_table=11 FT /locus_tag="BF9343_0806" FT /old_locus_tag="BF0844" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4221 SWALL:AAO79326 (EMBL:AE016944) (165 aa) FT fasta scores: E(): 5.5e-49, 73.93% id in 165 aa" FT /db_xref="GOA:Q5LGZ9" FT /db_xref="UniProtKB/TrEMBL:Q5LGZ9" FT /protein_id="CAH06587.1" FT /translation="MSSNIFLTIAIVTTGIFAVQFILSIFFGDIDADADIDTDISSVVS FT FKGLTHFGIGFGWYMYLQHNTEIQTYLTGVAIGLIFVFAVWFLYKKAYQLQQTTHSERT FT EQLVGRECTIYFKQNEKKYTVQISRDGAMREIDVVTESGKSYQTGDKATITAYKDGTLY FT IQ" FT misc_feature complement(order(1038274..1038342,1038355..1038423, FT 1038460..1038528)) FT /note="3 probable transmembrane helices predicted for FT BF0844 by TMHMM2.0 at aa 5-27, 40-62 and 67-89" FT misc_feature complement(1038487..1038540) FT /note="Signal peptide predicted for BF0844 by SignalP 2.0 FT HMM (Signal peptide probability 0.779) with cleavage site FT probability 0.727 between residues 18 and 19" FT CDS 1038695..1040482 FT /transl_table=11 FT /locus_tag="BF9343_0807" FT /old_locus_tag="BF0845" FT /product="conserved hypothetical protein, possible FT ATP/GTP-binding site" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4251 SWALL:AAO79356 (EMBL:AE016944) (615 aa) FT fasta scores: E(): 5.4e-59, 36.46% id in 606 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT3160 FT SWALL:AAO78266 (EMBL:AE016939) (568 aa) fasta scores: E(): FT 8.4e-40, 30.42% id in 562 aa" FT /db_xref="GOA:Q5LGZ8" FT /db_xref="InterPro:IPR006626" FT /db_xref="InterPro:IPR011050" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGZ8" FT /protein_id="CAH06588.1" FT /translation="MKTILLFALSLLLSLSVSDVCAQERVYDISQFGLKANSKKNASPV FT VRKAIAKIKAECRDGEKVILRFPAGRYNFHEAGSTVREYYISNHDQDNPKKVGIALEDM FT KNLTIDGQGSEFVFYGRMIPVSLLRSENCVLKNFSIDFEQPHIAQVQVVENDPEKGITF FT EPAPWVDYRISKDSVFEGLGEGWVMRYSWGIAFDGKTKHVVYNTSDIGCPTKGAFEVAP FT RRICSPKWKDARLVPGTVVAMRGWGRPTPGIFMSHDVNTSLLDVKVHYAEGMGLLAQLC FT EDITLDGFGVCLKGDNDPRYFTTQADATHFSGCKGKIVSKNGLYEGMMDDAINVHGTYL FT KVIKRVDDHTLIGRYMHDQSWGFEWGRPGDDVQFVRSETMELIGKQNQITAIRPYDKGE FT IRGAREFSITFKEAIDPAINEKSGFGIENLTWTPEVLFAGNTIRNNRARGTLFSTPKKT FT VVEDNLFDHTSGTAILLCGDCNGWFETGACRDVTIRRNRFINALTNMFQFTNAVISIYP FT EIPNLKDQQKYFHGGKDGGIVIEDNEFDTFDAPILYAKSVDGLIFRNNVIKTNTEFKPF FT HWNKDRFLLERVTNVKISE" FT misc_feature 1038695..1038760 FT /note="Signal peptide predicted for BF0845 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.742 between residues 22 and 23" FT misc_feature 1039271..1039294 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 1040514..1041668 FT /transl_table=11 FT /locus_tag="BF9343_0808" FT /old_locus_tag="BF0846" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT1579 SWALL:AAO76686 (EMBL:AE016932) (377 aa) FT fasta scores: E(): 1.6e-25, 34.88% id in 344 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT0585 SWALL:AAO75692 (EMBL:AE016928) (169 aa) fasta FT scores: E(): 3.9e-24, 43.63% id in 165 aa" FT /db_xref="GOA:Q5LGZ7" FT /db_xref="InterPro:IPR002563" FT /db_xref="InterPro:IPR009002" FT /db_xref="InterPro:IPR012349" FT /db_xref="UniProtKB/TrEMBL:Q5LGZ7" FT /protein_id="CAH06589.1" FT /translation="MKRILLFLLACCPMLLCAQEDNSKYLAGAVPVVNGKVIFTEVIQA FT SDMSKRQIYDALLKWAEKRFTPSKGQKGRVAYFDEKKGQIACLGEEYLQLSATNSFFLD FT RATIKYRLVINCLDGSCKMEMYNISYFHGDDTEMEAEDWITDETGLNKAKTKVVAKYGK FT LRIKTIDLFDDLTEQVTKTLGGAKSEVPLLAKEPKVTPEVFDRELPKAVEQGAMAGYKH FT IPADKIPGNIIKMLSEDWMLITAGTEDKYNMMTASWGGLGYLYNKPVSFCFIYPTRYTY FT QLMEKNDTYTISFYTETYRDALKYCGSHSGEDVDKVKGAGLTPLTTPSGSKAFSEAWMI FT IECKKMLSQPITPGAFDTPELKEAWKDKSLHTMYIGEIMNVWVK" FT misc_feature 1040514..1040567 FT /note="Signal peptide predicted for BF0846 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.681 between residues 18 and 19" FT CDS 1041749..1042507 FT /transl_table=11 FT /gene="truA" FT /gene_synonym="hisT" FT /gene_synonym="asuC" FT /gene_synonym="leuK" FT /locus_tag="BF9343_0809" FT /old_locus_tag="BF0847" FT /product="putative tRNA pseudouridine synthase A" FT /EC_number="4.2.1.70" FT /note="Similar to Escherichia coli tRNA pseudouridine FT synthase A TruA or HisT or AsuC or LeuK or B2318 FT SWALL:TRUA_ECOLI (SWALL:P07649) (270 aa) fasta scores: E(): FT 9.6e-24, 37.5% id in 248 aa, and to Bacteroides FT thetaiotaomicron tRNA pseudouridine synthase A BT4237 FT SWALL:AAO79342 (EMBL:AE016944) (269 aa) fasta scores: E(): FT 1.5e-82, 80.47% id in 251 aa, and to Thermoanaerobacter FT tengcongensis tRNA pseudouridine synthase A TruA or TTE2258 FT SWALL:TRUA_THETN (SWALL:Q8R7Y7) (240 aa) fasta scores: E(): FT 2.4e-28, 39.25% id in 242 aa" FT /db_xref="GOA:Q5LGZ6" FT /db_xref="HSSP:1DJ0" FT /db_xref="InterPro:IPR001406" FT /db_xref="InterPro:IPR020094" FT /db_xref="InterPro:IPR020095" FT /db_xref="InterPro:IPR020097" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGZ6" FT /protein_id="CAH06590.1" FT /translation="MSVQRYFIYLAYDGTHYHGWQIQPNGISIQECLMKALATFLRKDT FT EVIGAGRTDAGVHASLMVAHFDYEGEPLDVDKVAEKLNRLLPQDISVYKVCRVKPDAHA FT RFDATARTYKYYITTVKFPFNRQYRYRIHNPLDFQKMNEAALTLFHYSDFTSFSKLHTD FT VKTNICKIMHAEWTQEDEYTWVFTIQADRFLRNMVRAIVGTLLEVGRGKLSVDDFRKII FT EQQNRCKAGTSAPGNALFLVNVEYPQEIFE" FT misc_feature 1041770..1042069 FT /note="Pfam match to entry PF01416 PseudoU_synth_1, tRNA FT pseudouridine synthase, score 98.4, E-value 1.2e-26" FT misc_feature 1042181..1042489 FT /note="Pfam match to entry PF01416 PseudoU_synth_1, tRNA FT pseudouridine synthase, score 63.0, E-value 5.3e-16" FT CDS 1042539..1043438 FT /transl_table=11 FT /locus_tag="BF9343_0810" FT /old_locus_tag="BF0848" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT permease BT4238 SWALL:AAO79343 (EMBL:AE016944) (299 aa) FT fasta scores: E(): 7e-107, 87.62% id in 299 aa, and to FT Clostridium acetobutylicum predicted permease Cac1984 FT SWALL:Q97HM6 (EMBL:AE007702) (285 aa) fasta scores: E(): FT 4.7e-25, 34.57% id in 295 aa, and to Aquifex aeolicus FT hypothetical protein Aq_246 SWALL:O66609 (EMBL:AE000680) FT (279 aa) fasta scores: E(): 1.6e-10, 26.66% id in 255 aa" FT /db_xref="GOA:Q5LGZ5" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:Q5LGZ5" FT /protein_id="CAH06591.1" FT /translation="MWLLLAFLSATLLGFYDVFKKKALKDNAVLPVLFFNTLFSSLIFL FT PFILLSAFAPGVLGGTMLDVPVVGWEVHKFIIIKSFIVLSSWILGYFGMKHLPITIVGP FT INATRPVMVLVGAMLVFGERLNLYQWIGVMLAIISFFMLSRSGKKEGIDFKHNKWILFI FT ILAAVAGAVSGLYDKYLMKQLPPMVVQSWYNVYQMFIMCPILALLWWPKRKSSTPFRWD FT WAIIFISIFLCAADFVYFYALSYEDSMISIVSMVRRGSVIVSFLFGAMVFREKNLKSKA FT IDLILVLIGMIFLYLGTK" FT misc_feature order(1042548..1042595,1042632..1042700,1042743..1042811, FT 1042830..1042898,1042926..1042979,1043013..1043066, FT 1043109..1043168,1043205..1043273,1043301..1043354, FT 1043379..1043432) FT /note="10 probable transmembrane helices predicted for FT BF0848 by TMHMM2.0 at aa 4-19, 32-54, 69-91, 98-120, FT 130-147, 159-176, 191-210, 223-245, 255-272 and 281-298" FT misc_feature 1042569..1042973 FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 38.3, E-value 1.4e-08" FT misc_feature 1042710..1042754 FT /note="PS00678 Trp-Asp (WD) repeats signature." FT misc_feature 1043040..1043426 FT /note="Pfam match to entry PF00892 DUF6, Integral membrane FT protein DUF6, score 30.2, E-value 4e-06" FT CDS 1043466..1044119 FT /transl_table=11 FT /locus_tag="BF9343_0811" FT /old_locus_tag="BF0849" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4239 SWALL:AAO79344 (EMBL:AE016944) (216 aa) FT fasta scores: E(): 6.8e-50, 62.08% id in 211 aa" FT /db_xref="InterPro:IPR021670" FT /db_xref="UniProtKB/TrEMBL:Q5LGZ4" FT /protein_id="CAH06592.1" FT /translation="MKKSTLTLLLFILGISSSFSVGAQEAKTVFVNIPDSLCPLLSSVN FT RADCIDFIESKMKAQVTNRFGGKSEMTELSPDYVSLQMSDASNWQMKLLPLNDTTKVVC FT AVSTVCAPACDSHIRFYTTDWKELPATDFLPSVPQMNDFFTSSDSTDYDFIDARLQADM FT TLMQAELSKENGTLTFTLTTPEYMEKETAEKLKPFLRRSIVYTWKDGKFIPDTL" FT misc_feature 1043466..1043534 FT /note="Signal peptide predicted for BF0849 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.942 between residues 23 and 24" FT CDS complement(1044100..1045185) FT /transl_table=11 FT /locus_tag="BF9343_0812" FT /old_locus_tag="BF0850" FT /product="putative desulfatase" FT /note="Similar to Prevotella sp. RS2 mucin desulfating FT desulfatase MdsC protein SWALL:Q9L5V9 (EMBL:AF248951) (362 FT aa) fasta scores: E(): 8.1e-92, 64.32% id in 356 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical FT protein, with a phosphotransferase enzyme family domain FT BT4240 SWALL:AAO79345 (EMBL:AE016944) (363 aa) fasta FT scores: E(): 1.4e-133, 92.77% id in 360 aa, and to FT Clostridium perfringens hypothetical protein CPE1200 FT SWALL:Q8XL42 (EMBL:AP003189) (368 aa) fasta scores: E(): FT 5e-49, 42.38% id in 361 aa" FT /db_xref="GOA:Q5LGZ3" FT /db_xref="InterPro:IPR002575" FT /db_xref="InterPro:IPR011009" FT /db_xref="UniProtKB/TrEMBL:Q5LGZ3" FT /protein_id="CAH06593.1" FT /translation="MKDLLSIVSKFKVQGTVGEIKPLGAGLINDTYKVNTTEADAPDYV FT LQRINHAIFQNVEMLQDNIAAVTGHIRKKLTEAGETDVDRKVLTFLPTEEGKTYWFDGD FT SYWRVMVFIPRAKTYETVNPEYSYYAGAAFGNFQAMLADIPATLGETIPDFHNMEFRLK FT QLREAVAANAAGRVAEVQYYLDEIEKRADEMCKAERLYREGKLPKRVCHCDTKVNNMMF FT DEDGKVLCVIDLDTVMPSFIFSDYGDFLRTGANTGDEDDKNLDNVNFNMEIFKAFTKGY FT LEGAGSFLTPIEIENLPYAAALFPYMQCVRFLADYINGDTYYKIKYPEHNLVRTKAQFK FT LLQSVEEHTPEMEAYIKECLG" FT CDS complement(1045207..1048506) FT /transl_table=11 FT /locus_tag="BF9343_0813" FT /old_locus_tag="BF0851" FT /product="putative beta-galactosidase" FT /note="Similar to Escherichia coli beta-galactosidase LacZ FT or B0344 SWALL:BGAL_ECOLI (SWALL:P00722) (1023 aa) fasta FT scores: E(): 1.5e-71, 32.04% id in 1005 aa, and to FT Bacteroides thetaiotaomicron beta-galactosidase BT4241 FT SWALL:Q89ZY0 (EMBL:AE016944) (1103 aa) fasta scores: E(): FT 0, 78.08% id in 1086 aa, and to Bacillus megaterium FT beta-galactosidase BgaM SWALL:BGAL_BACME (SWALL:O52847) FT (1034 aa) fasta scores: E(): 1.4e-113, 36.68% id in 1093 FT aa" FT /db_xref="GOA:Q5LGZ2" FT /db_xref="InterPro:IPR004199" FT /db_xref="InterPro:IPR006101" FT /db_xref="InterPro:IPR006102" FT /db_xref="InterPro:IPR006103" FT /db_xref="InterPro:IPR006104" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR011013" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013812" FT /db_xref="InterPro:IPR014718" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LGZ2" FT /protein_id="CAH06594.1" FT /translation="MLGGLLMASTFASADNKPTKPYWQDVQVVAVNKEYPRSSFMTYEN FT RANALTGKFEKSKYYQLLNGTWKFYFVDSYKNLPANITDPAISTADWADIKVPGNWEVQ FT GHGVAIYTNHGYEFQPRNPQPPTLPEANPVGVYRRDIDIPADWDGRDIYLHLAGAKSGV FT YVYINGQEVGYSEDSKNSAEFLINKFVKPGKNVLTLKIYRWSTGSYLECQDFWRISGIE FT RDVFLYSQPKAALKDFRVTSTLDDTYKDGIFKLGVDLRNNGSTAGNMTLVYELLDANGK FT VVATGEKATNVAAGETRTVSFDQTLPDVKTWTSEAPNLYKLVMTVKENGKVNEIIPFNV FT GFRRIEIKPTEQLARNGKPYVCLFINGQPLKLKGVNIHEHNPATGHYMTEELMRKDFEL FT MKQHNLNTVRLCHYPQDRRFYELCDEYGLYVYDEANIESHGMYYDLAKGGTLGNNPEWL FT KAHMDRTINMFERNKNYPSLTFWSLGNEAGNGYNFYQTYLWVKNADKDIMNRPVNYERA FT QWEWNSDMYVPQYPGADWLEAMGKRGSDRPIVPSEYSHAMGNSNGNLWDQWKAIYKYPN FT LQGGYIWDWVDQGIDAVDENGRHFWTYGGDYGVNTPNDGNFNCNGIVSPDRTPHPAMAE FT VKYVHQNVAFEAVDPANGKFLVKNRFYFTNLQKYMISYTIKANGKTVKGGKMSVNVEPQ FT GSKEITIATSGLKSKPGTEYFIYFNVTTTEPEPLIPVGHEIAYEQFRLPIEPGERTFAT FT GGPALKVSAEGNELTASSSKVNFVFDKKTGLVSSYKVGGTEYFKDGFGLQPNFWRAPND FT NDYGNGNPKRLQVWKQSSKNFNVVDANIVMDGKDAVLTANYLLATGNLYIVTYRISPSG FT VVKADFTFTSTDMEAAKTEASEATLMATFTPGSDAARKAASKLEVPRIGVRFRLPAEMN FT QVEYFGRGPEENYIDRNAGTLIDLYKTTADQMYFPYVRPQENGHHTDTRWLTLNKKGGK FT GLTIYADKTIGFNALRNSVEDFDGEETVSRPYQWLNRDAGELVHDESKAKDQLPRKTHI FT NDITPRNFVEVCVDMKQQGVAGYNSWGARPEPGYNIPANQEYKWGFTIVPR" FT misc_feature complement(1045219..1045611) FT /note="Pfam match to entry PF02930 Bgal_small_C, Beta FT galactosidase small chain, C terminal domain, score 58.6, FT E-value 1.2e-14" FT misc_feature complement(1045639..1046244) FT /note="Pfam match to entry PF02929 Bgal_small_N, Beta FT galactosidase small chain, N terminal domain, score 89.7, FT E-value 4.9e-24" FT misc_feature complement(1046572..1047474) FT /note="Pfam match to entry PF02836 Glyco_hydro_2_C, FT Glycosyl hydrolases family 2, TIM barrel domain, score FT 328.1, E-value 8.5e-96" FT misc_feature complement(1047478..1047810) FT /note="Pfam match to entry PF00703 Glyco_hydro_2, Glycosyl FT hydrolases family 2, immunoglobulin-like beta-sandwich FT domain, score 72.2, E-value 9.3e-19" FT misc_feature complement(1047814..1048377) FT /note="Pfam match to entry PF02837 Glyco_hydro_2_N, FT Glycosyl hydrolases family 2, sugar binding domain, score FT 161.8, E-value 9.7e-46" FT CDS complement(1048568..1049458) FT /transl_table=11 FT /locus_tag="BF9343_0814" FT /old_locus_tag="BF0852" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT transporter BT4242 SWALL:AAO79347 (EMBL:AE016944) (296 aa) FT fasta scores: E(): 1.6e-101, 84.12% id in 296 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT3127 SWALL:AAO78233 (EMBL:AE016939) (305 aa) fasta FT scores: E(): 2.4e-44, 54.75% id in 305 aa, and to FT Thermotoga maritima hypothetical protein Tm0177 TM0177 FT SWALL:Q9WY21 (EMBL:AE001702) (283 aa) fasta scores: E(): FT 5.9e-30, 33.68% id in 282 aa" FT /db_xref="GOA:Q5LGZ1" FT /db_xref="InterPro:IPR003740" FT /db_xref="InterPro:IPR019264" FT /db_xref="UniProtKB/TrEMBL:Q5LGZ1" FT /protein_id="CAH06595.1" FT /translation="MKMKISKPSKQGVIRETKDYLMIALGMILYGIGWTLFLLPNDITT FT GGVPGIASIVYFATGFPVQYTYFAINAVLLMVSLKVLGFRFSLKTIFGVFTLTFFLSVI FT QKLTANVTLLHDQPFMACVLGASFCGSGIGIAFSANGSTGGTDIIAAVINKYRDITLGR FT VMLICDLIIISSSYFVLKDWEKVVYGYVTLYVCSFVLDQVVNSARQSVQFFIISNKYEE FT IGKRINEYPHRGVTIINATGFYTGKEQKMMFVLAKKRESTIIFRLIKDCDPTAFVSQSA FT VIGVYGEGFDHIKVK" FT misc_feature complement(1048859..1049107) FT /note="Pfam match to entry PF02588 DUF161, Uncharacterized FT BCR, YitT family COG1284, score 72.7, E-value 6.6e-19" FT misc_feature complement(order(1048919..1048978,1049036..1049104, FT 1049147..1049215,1049234..1049302,1049345..1049398)) FT /note="5 probable transmembrane helices predicted for FT BF0852 by TMHMM2.0 at aa 21-38, 53-75, 82-104, 119-141 and FT 161-180" FT misc_feature complement(1049156..1049404) FT /note="Pfam match to entry PF02588 DUF161, Uncharacterized FT BCR, YitT family COG1284, score 77.0, E-value 3.5e-20" FT CDS complement(1049570..1050964) FT /transl_table=11 FT /locus_tag="BF9343_0815" FT /old_locus_tag="BF0853" FT /product="putative GFO/IDH/MOCA family oxidoreductase" FT /note="Similar to Shewanella oneidensis oxidoreductase, FT GFO/IDH/MOCA family so3120 SWALL:Q8ECL7 (EMBL:AE015749) FT (459 aa) fasta scores: E(): 2.3e-67, 41.81% id in 452 aa, FT and to Bacteroides thetaiotaomicron putative oxidoreductase FT BT4243 SWALL:AAO79348 (EMBL:AE016944) (467 aa) fasta FT scores: E(): 2.9e-166, 83.51% id in 467 aa, and to FT Bacteroides thetaiotaomicron putative oxidoreductase BT4252 FT SWALL:AAO79357 (EMBL:AE016944) (419 aa) fasta scores: E(): FT 1.8e-68, 48.48% id in 429 aa" FT /db_xref="GOA:Q5LGZ0" FT /db_xref="InterPro:IPR000683" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGZ0" FT /protein_id="CAH06596.1" FT /translation="MFKHLNALFIGLALFACTSGAVAQTIKPIETPVPVRPAGQKDVVG FT LTTPKLDVVRVGFIGLGMRGPGAVERFTHIPGTQIVALCDLIPERVAGAQKILTKANLP FT EAASYSGSEDAWKKLCERKDIDLVYIATDWKHHAQMAIYAMEHGKHVAIEVPSAMTLDE FT IWALINTSEKTRKHCMQLENCVYDFFELTTLNMAQQGVFGEVLHTEGAYIHNLEDFWPY FT YWNNWRMDYNQNHRGDVYATHGMGPACQLLDIHRGDKMNYLVSMDTKAVNGPAYIKKTT FT GKEVKDFQNGDQTSTLIRTEKGKTILIQHNVMTPRPYSRMYQVVGADGYASKYPIEEYC FT MRPTQIASNDVPNHEKLNAHGSVPADVKKALMDKYKHPIHKELEETAKKVGGHGGMDYI FT MDYRLVYCLRNGLPLDMDVYDLAEWCCMADLTKLSIENSSAPVAIPDFTRGAWNKVKGY FT RHAFAK" FT misc_feature complement(1050419..1050805) FT /note="Pfam match to entry PF01408 GFO_IDH_MocA, FT Oxidoreductase family, NAD-binding Rossmann fold, score FT 51.7, E-value 1.4e-12" FT misc_feature complement(1050896..1050964) FT /note="Signal peptide predicted for BF0853 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.979 between residues 23 and 24" FT misc_feature complement(1050914..1050946) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(1051170..1051418) FT /transl_table=11 FT /locus_tag="BF9343_0816" FT /old_locus_tag="BF0854" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGY9" FT /protein_id="CAH06597.1" FT /translation="MVCIYNVYQKVNNKLEQPNKGKESHKRNRRMKDRVATHNTLHAAL FT YTPDKHCTTGFKQLVKDDIIRLLQKEKPACCRDGNFR" FT CDS complement(1052070..1054337) FT /transl_table=11 FT /locus_tag="BF9343_0817" FT /old_locus_tag="BF0855" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT3155 SWALL:AAO78261 (EMBL:AE016939) FT (808 aa) fasta scores: E(): 5.3e-25, 23.03% id in 738 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT1777 SWALL:AAO76884 (EMBL:AE016933) (1019 aa) FT fasta scores: E(): 2.9e-23, 27.83% id in 467 aa, and to FT Arabidopsis thaliana at4g34260/f10m10_30 SWALL:Q8L7W8 FT (EMBL:AY125494) (843 aa) fasta scores: E(): 7.9e-23, 23.21% FT id in 797 aa" FT /db_xref="GOA:Q5LGY8" FT /db_xref="InterPro:IPR008928" FT /db_xref="UniProtKB/TrEMBL:Q5LGY8" FT /protein_id="CAH06598.1" FT /translation="MKIKLLLLLCCGLWSSCNSYDYCPVTPSESDLVFTGLARSWDEAM FT PLGNATVGALVWQRDSTLRLSLDRTDLWDLRPVDSLSGDNFRFSWVKEHIRQKNYLPVQ FT KKLDWPYDMNPAPSKIPGAAIEFPLEQIGTPTQVRLYLNNALCEADWADGTQMQTFVHA FT TEPIGWFVFRNLKTPIEPSIITPVYNKTKPDGSLDPVSGQDLHRLGYQQGKVVREGNQI FT TYHQKGYGDFSYDVTVCWKQEGETLYGTWSVTSSLSGEQASEKAEAALQRGLKHDYQAH FT LEYWDKYWAQSSITLPDSVLQKQYQNEMYKFGSTTREHSYPISLQAVWTADNGKLPPWK FT GDYHHDLNTQLSYWPAYTGNHLTEGMGYLNTLWNQRDAYKRYTRRYFGTEGMNIPGVCT FT LTGEPMGGWIQYSMSQTVAAWLAQHFYLQWKYSADRTFLKERAYPFIKDVAIYLEQISE FT VTPEGVRKLEFSSSPEIFDNSLQAWFSDMTNYDLAMMHFLFKATSELAHELNLADEAGH FT WASLEAQLPDYDIDEEGCLTFAKGYPYKESHRHFSHAMAIHPLGLIDWSDGEKSQHIIR FT ATLKRLDKVGPDYWTGYSYSWLANMKARAFDGEGAAQALKTFAECFCLKNTFHANGDQT FT QSGKSRFTYRPFTLEGNFAFAAGIQEMLLQSHTGVIRIFPAIPKEWKDVSFENLRAMGA FT FLVSARMEGGEINRVRIYSEKGGMLKMARPGTLKPNKNYTLSGTDILNIDTQAGEWIEL FT NP" FT misc_feature complement(1054281..1054337) FT /note="Signal peptide predicted for BF0855 by SignalP 2.0 FT HMM (Signal peptide probability 0.991) with cleavage site FT probability 0.916 between residues 19 and 20" FT misc_feature complement(1054287..1054319) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(1054461..1057232) FT /transl_table=11 FT /locus_tag="BF9343_0818" FT /old_locus_tag="BF0856" FT /product="putative beta-glucuronidase" FT /note="Similar to Bacteroides thetaiotaomicron FT beta-glucuronidase BT4151 SWALL:AAO79256 (EMBL:AE016944) FT (958 aa) fasta scores: E(): 2.8e-91, 34.97% id in 955 aa, FT and to Bacteroides fragilis putative beta-galactosidase FT BgaB SWALL:BAC56907 (EMBL:AB102772) (928 aa) fasta scores: FT E(): 3.1e-45, 39.4% id in 916 aa, and to Bacteroides FT thetaiotaomicron beta-glucuronidase BT3292 SWALL:AAO78398 FT (EMBL:AE016939) (591 aa) fasta scores: E(): 4.6e-16, 24.24% FT id in 528 aa" FT /db_xref="GOA:Q5LGY7" FT /db_xref="InterPro:IPR006102" FT /db_xref="InterPro:IPR006103" FT /db_xref="InterPro:IPR006104" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013812" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LGY7" FT /protein_id="CAH06599.1" FT /translation="MKQSFQNTRYRAILLLTGLMLAMTAMAQTLTNDALDLSGMWRFQL FT DPMGFGKTPGSELYLDKLSETIMLPGSTDQGGKGIKNTARYVDRLSRKFEYQGAAWYQR FT EVVIPEDWADREIYLKLERCHWETTVYVDDKEAGMKEHLSTPNTFVLTPLLAPGIHTLT FT ICVNNTLKYPMDQWNHGTTEYTQTNWNGIAGDISLYAKEKAHIRQINVYPDVSSKAVEV FT SVQPAPLKTGQTGKLELCIREQGGKIIVRQTLNADSLQVHTGIRQTLPMGNRVKLWDEF FT TPYLYEIEASWNVDGKTDTQTRTFGMRNVEQGKHHIRLNGRDIHLRGVLDCAVFPLTGY FT PSTNVDDWKRIFTTIKEYGMNHVRFHSWCPPEAAFEAGDEVGMYLQAELPMWIKDVGKY FT PYRRDFFEKEMYAILDAYGNHPSFILMCNGNENEGDFAVLEDLVKKAQKYDNRRLYSAS FT TARTHTPSDQYYVSHVTSKGWITVYEGKPSTDWDRCKESDIDVPVIAHETGQRCMYPNF FT EEMKKYTGVVEARNFEVFRERLAKNGMLHQANDFFRATGAHTVLQYKEVNESLLRTRNS FT GGFQLLGLADFPGQGSAFVGILDAFWESKGLVTPEKFRESCAPTVLLARLPKRTFRNGE FT KLKAKMEIYHFGKDALNSRKLNWTLTGEDGTVYHKGSLKTKSIQPATVDSLGIIELPLN FT GMDSARKLTLKAELGGIHNEWDVWVYPEQPKTEQHNFVYTRTWNDETKQWLNEGKNVLL FT IPEKCKGRKAHFASHFWNPIMFNWNPMIVGTLIDNEHPAFRDFPTRNYADWQWWDILNY FT STALELDELKEITPLIQSIDSYETNQKLGISFEAKVGKGKLFVLCADPEKKIDERPAMQ FT QLLTSVRNYVSSGHFNPTKSLPVYLLDALFAPASEEKSGGKGSKAIELLLNK" FT misc_feature complement(1056309..1056623) FT /note="Pfam match to entry PF00703 Glyco_hydro_2, Glycosyl FT hydrolases family 2, immunoglobulin-like beta-sandwich FT domain, score -18.6, E-value 0.12" FT misc_feature complement(1056627..1057181) FT /note="Pfam match to entry PF02837 Glyco_hydro_2_N, FT Glycosyl hydrolases family 2, sugar binding domain, score FT -35.2, E-value 3.8e-05" FT misc_feature complement(1057140..1057199) FT /note="1 probable transmembrane helix predicted for BF0856 FT by TMHMM2.0 at aa 12-31" FT misc_feature complement(1057152..1057232) FT /note="Signal peptide predicted for BF0856 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.994 between residues 27 and 28" FT CDS complement(1057229..1060531) FT /transl_table=11 FT /locus_tag="BF9343_0819" FT /old_locus_tag="BF0857" FT /product="putative TPR-domain protein" FT /note="Similar to Bacteroides thetaiotaomicron TPR-domain FT containing protein BT4398 SWALL:AAO79503 (EMBL:AE016945) FT (1093 aa) fasta scores: E(): 0, 61.95% id in 1096 aa, and FT to Escherichia coli O6 hypothetical protein YphG or C3071 FT SWALL:Q8FF32 (EMBL:AE016764) (1124 aa) fasta scores: E(): FT 4.9e-127, 41.68% id in 1070 aa, and to Escherichia coli FT hypothetical protein YphG or B2549 SWALL:YPHG_ECOLI FT (SWALL:P76585) (1124 aa) fasta scores: E(): 1.8e-126, FT 41.36% id in 1071 aa" FT /db_xref="GOA:Q5LGY6" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:Q5LGY6" FT /protein_id="CAH06600.1" FT /translation="MKESVNVWEEDILLPTYGIGRPEKNPMFLEKRVYQGSSGVVYPYP FT VIEKIEDTCEEKSYHAVWLENEYIKVMILPELGGRIQMAFDKVKQRHFIYYNHVIKPAL FT VGLTGPWISGGIEFNWPQHHRPSTFLPVDYSIERCKDGSVVVWVSERERMFGQKGTAGF FT TLRPGRAVLEIQGKVSNPTPLPQTFLWWANPAVAVNDCYQSVFPSDVNAVFDHGKRDVS FT RYPIATGTYYKMDYSAGVDISRYKNIPVPTSYMAIRSNYNFVGGYENDTQAGVLHVANH FT HISPGKKQWTWGNGDFGQAWDRNLTDADGPYIELMTGVYTDNQPDFSWLQPYEEKTFTQ FT YFMPYRELGVVKNASSELLMNLETEGEECRLKLFATSAQQGLRIVVRQAGVIRFEEIRS FT LSPEQIFDRLIPINDLHEAEVIIYDTNGRKKLSWKAEPETIKAVPEAAKPALAPEEIKT FT NEELYLTGLHLEQYRHATYCPTDYYREALRRDNGDARCNNAMGLWLIRKGEFAQAEPYL FT RNAIARLTEKNPNPYDGEAFYNLGLALKFQGKDDEAYDSFYKSCWNAAWQDAGYYSLAQ FT ISVSRSNWEEALEEIEKSLLHNWHNLRGRHLKAIILRHLEQKEEALAWIEDSLKTDTFN FT FGCLFEKYLITRNETVLLQLRNLMKRGAPDYEALVLDYTSAGRFEEALAVAELAIAQPV FT GEQTLLHYYKSWCLIRLGKTAEAQIAIATAEKEPADYCFPNALEAIEALQCVVDFAGKA FT PKALYYLGNLWYDKRRYPTAIAAWERSSREDETFPTVWRNLSLAYFNKMNRPDEAVALL FT EKAFRLDHTDARVLMELDQLYKRLNRPHIERLCFLEQHIDIVMTRDDLYLEYVTLLNQT FT GQYREAIRRIDQRKFHPWEGGEGKVPAQYQLARLELAKELINRKKYDDALALIDECYIY FT PTHLGEGKLPGAQENDFNYYKAYILQQQGRPEEAHSLFVKACSGNSQPAAAMYYNDQKP FT DKIFYQGLAYRKLGEEEKARSRFNQLITYGEEHLFDRFKMDYFAVSLPDLLIWEDDMDK FT KNRIHCNYLMALGHLGLGNRTKAEHFFDIAASMDNNHQGVQIHRKLMNTILS" FT misc_feature complement(1057466..1057567) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 1.7, E-value 2.6" FT misc_feature complement(1058066..1058170) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 11.9, E-value 0.21" FT misc_feature complement(1058171..1058272) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 21.9, E-value 0.0012" FT misc_feature complement(1058627..1058728) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 3.5, E-value 1.7" FT misc_feature complement(1058729..1058830) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 5.7, E-value 0.96" FT misc_feature complement(1058831..1058932) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 10.6, E-value 0.29" FT misc_feature complement(1058951..1059052) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 2.1, E-value 2.3" FT CDS complement(1060545..1061924) FT /transl_table=11 FT /locus_tag="BF9343_0820" FT /old_locus_tag="BF0858" FT /product="putative sugar-proton symporter" FT /note="Similar to Bacillus subtilis arabinose-proton FT symporter AraE SWALL:ARAE_BACSU (SWALL:P96710) (464 aa) FT fasta scores: E(): 5.4e-58, 39.08% id in 458 aa, and to FT Bacteroides thetaiotaomicron xylose/H+ symporter BT4397 FT SWALL:AAO79502 (EMBL:AE016945) (460 aa) fasta scores: E(): FT 2.8e-110, 59.17% id in 463 aa, and to Bacteroides FT thetaiotaomicron arabinose-proton symporter BT0436 FT SWALL:AAO75543 (EMBL:AE016927) (468 aa) fasta scores: E(): FT 4.9e-61, 37.68% id in 467 aa" FT /db_xref="GOA:Q5LGY5" FT /db_xref="InterPro:IPR003663" FT /db_xref="InterPro:IPR005828" FT /db_xref="InterPro:IPR005829" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:Q5LGY5" FT /protein_id="CAH06601.1" FT /translation="MKQTRGYLLLICIVSAMGGLLFGYDWVVIGGAKIFYEPYFGIENS FT AALRGWAMSSALIGCLAGALLSGIWSDKYGRKKMLVIASFLFALSAWGTGAVDHFSYFI FT FYRIVGGLGIGIASNISPVYIAEVSPAHVRGKFVSLNQLTIVLGILLAQLANWQIGEYY FT TQGSDILSETSVQWAWRWMFWAELIPAGIFFLLSFIIPESPRWLATVHQQEKAQKTLTR FT IGGETYARQTLEELNQLTQSQGNRQNNEWKSVFRPEMRKVLIIGIVLAIFQQWCGINVI FT FNYAHEIFSSAGYAVSDVLMNIVVTGITNVIFTFVAIYTVDKWGRRTLMLIGSAGLALI FT YLILGTCYFLDVNGLPMLLLVVLAIACYAMSLAPVVWVVLSEIFPVKIRGMAIAISTFF FT LWVACFILTYTFPVLNESIGAEGTFWLYGGICLAGFLFIRQNLPETKGKTLEEIEKELI FT K" FT misc_feature complement(1060554..1061894) FT /note="Pfam match to entry PF00083 sugar_tr, Sugar (and FT other) transporter, score 451.0, E-value 8.8e-133" FT misc_feature complement(order(1060611..1060673,1060683..1060751, FT 1060788..1060856,1060869..1060937,1060962..1061030, FT 1061073..1061141,1061322..1061390,1061448..1061516, FT 1061550..1061618,1061634..1061687,1061712..1061780, FT 1061838..1061906)) FT /note="12 probable transmembrane helices predicted for FT BF0858 by TMHMM2.0 at aa 7-29, 49-71, 80-97, 103-125, FT 137-159, 179-201, 262-284, 299-321, 330-352, 357-379, FT 392-414 and 418-438" FT misc_feature complement(1060923..1060976) FT /note="PS00216 Sugar transport proteins signature 1." FT misc_feature complement(1061523..1061600) FT /note="PS00217 Sugar transport proteins signature 2." FT misc_feature complement(1061673..1061726) FT /note="PS00216 Sugar transport proteins signature 1." FT misc_feature complement(1061856..1061924) FT /note="Signal peptide predicted for BF0858 by SignalP 2.0 FT HMM (Signal peptide probability 0.984) with cleavage site FT probability 0.962 between residues 23 and 24" FT CDS 1062062..1062958 FT /transl_table=11 FT /locus_tag="BF9343_0821" FT /old_locus_tag="BF0859" FT /product="putative AraC transcriptional regulatory protein" FT /note="Similar to Pseudomonas aeruginosa MmsAB operon FT regulatory protein MmsR or pa3571 SWALL:MMSR_PSEAE FT (SWALL:P28809) (307 aa) fasta scores: E(): 3.6e-18, 33.54% FT id in 307 aa, and to Bacteroides thetaiotaomicron FT transcriptional regulator BT4396 SWALL:AAO79501 FT (EMBL:AE016945) (295 aa) fasta scores: E(): 5.6e-76, 61.4% FT id in 298 aa, and to Pediococcus pentosaceus raffinose FT operon transcriptional regulatory protein RafR FT SWALL:RAFR_PEDPE (SWALL:P43465) (277 aa) fasta scores: E(): FT 6.4e-14, 28.62% id in 248 aa" FT /db_xref="GOA:Q5LGY4" FT /db_xref="InterPro:IPR003313" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q5LGY4" FT /protein_id="CAH06602.1" FT /translation="MAKQKDGFLGEQALVLPPAIVQRMKTDPATSILYITDIGYYPKAY FT NHFRERETPIDQYVFIYCTEGRGWFSLDGQKHPVVPNQYFILPAGLPHAYGADEKEPWT FT IYWIHFGGTLAPLYCTHRTCRLTDIKPGMHSRISYRTELFEEIFRVLKMGYSLENLSYA FT SSVFHHYLGSLRYLREYREAFSEHRPAGEEDPVNAAIHYMKENLGKKLTLAELADYTGY FT SSSYFSNLFLKRTGYAPLSYFNQIKIQKACQFLDFTDMKVNQVCYRVGIEDAYYFSRLF FT SQIMGMSPREYKKVKKG" FT misc_feature 1062656..1062793 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 49.1, E-value 8.5e-12" FT misc_feature 1062692..1062757 FT /note="Predicted helix-turn-helix motif with score FT 1339.000, SD 3.75 at aa 211-232, sequence FT LTLAELADYTGYSSSYFSNLFL" FT misc_feature 1062800..1062928 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature 1062812..1062943 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 50.2, E-value 4e-12" FT CDS complement(1063113..1065764) FT /transl_table=11 FT /locus_tag="BF9343_0822" FT /old_locus_tag="BF0860" FT /product="putative beta-glucosidase" FT /note="Similar to Agrobacterium tumefaciens FT beta-glucosidase Cbg-1 SWALL:BGLS_AGRTU (SWALL:P27034) (818 FT aa) fasta scores: E(): 2e-46, 34.74% id in 872 aa, and to FT Streptomyces coelicolor putative beta-glucosidase sco6597 FT or sc8a6.18 SWALL:O87852 (EMBL:AL939128) (859 aa) fasta FT scores: E(): 4.9e-58, 29.72% id in 895 aa, and to FT Pseudomonas syringae beta-glucosidase PSPTO3318 FT SWALL:Q87ZV4 (EMBL:AE016867) (913 aa) fasta scores: E(): FT 5.7e-50, 34.38% id in 884 aa. Possible alternative start FT site at codon 46" FT /db_xref="GOA:Q5LGY3" FT /db_xref="InterPro:IPR001764" FT /db_xref="InterPro:IPR002772" FT /db_xref="InterPro:IPR011658" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LGY3" FT /protein_id="CAH06603.1" FT /translation="MKNIFLTMSLGIGLLFPCKLHAQSQYPFQNTTLSTEERVDDLIKR FT MTLEEKIDLLSGYNDFYLHPCERLGIPAFKLADGPLGVASWGLFGRATAFPSALSLAAS FT WNKNLAEKTGAMYAQEWRARGIHFLLAPGVNNYRASKGARNFEYFGEDPYLASEMVVPF FT IKAVQDGGVIATIKHFAANDQEFDRYTVSTEVSERALQEIYLPPFKAAVQKAGVKAVMT FT GYNLVNGVYCTENKHLIDILKKDWGFKGMLMSDWACTYSAENAANYGLDLEMGSNDWFT FT RKELLPLVKEGKVTEEVINDKVRRIYGACISMGFFDRPQQDTDIPTFNPQANQMALNTA FT CEGIILLKNEQNTLPIHRPKVIAVIGPTANPAIVSDRIYNVNSIVYGGGGSSKVHPWYV FT VSALEGIRQEFPEATVLYTEGISNQFKPRLFRNSKFRTKEGKPGLEANYYALSSDTSAT FT LSDKMIQQQAVAAGRTVSVNQSADRTIETDKEESGLILRRTDRTVNYEWWGYPFNESKL FT GNDYRVCWEGYVDVEKTDSIRFFVDAQGAYRLWIDGTLALDASQSQSFDVRNTAISAKK FT GDAKHIRLEFCNQRSTPAEIRMGYAYQSDIDFSEAKRLAAKADLVVFCAGLDGSIELEG FT RDRPFDLPYGQDMLIQELVKVNPKLIVAIHAGGGINMTRWIDQVPAVVHALYPGQEGGH FT ALAHILSGKVNPSAKLPFTIEKRWEDSPACGHYDETRKEKKVYYTEGIFTGYRGYDQKG FT IEPLFPFGFGLSYTTFDYSGLNIRMTDKKQKQLVVSFTVTNTGQRDGYEVAQLYVRDMQ FT SKEPRPLKELKGFDKVYLKAGESKQIEIGLSEDAFQYFNAKQNRWVFEKGEFEILVGAS FT SKDIRLAEKIKM" FT misc_feature complement(1063494..1064735) FT /note="Pfam match to entry PF01915 Glyco_hydro_3_C, FT Glycosyl hydrolase family 3 C terminal domain, score 132.5, FT E-value 6.6e-37" FT misc_feature complement(1064889..1065662) FT /note="Pfam match to entry PF00933 Glyco_hydro_3, Glycosyl FT hydrolase family 3 N terminal domain, score 331.9, E-value FT 6.1e-97" FT misc_feature complement(1065699..1065764) FT /note="Signal peptide predicted for BF0860 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 1.000 between residues 22 and 23" FT CDS complement(1065871..1067307) FT /transl_table=11 FT /locus_tag="BF9343_0823" FT /old_locus_tag="BF0861" FT /product="putative cytochrome c binding protein" FT /note="no significant database matches" FT /db_xref="InterPro:IPR011042" FT /db_xref="InterPro:IPR011659" FT /db_xref="UniProtKB/TrEMBL:Q5LGY2" FT /protein_id="CAH06604.1" FT /translation="MKTIYILLITVLSWSLQACTAQCGKPDACTDSIPRIYPDYAGVTF FT PLNIAPPNFRIGENADAFQTEIGTGETADILCTSKSPEVIIPTKKWKKLLQKAAGKEIF FT IRITLLRGGKWTRYADIKDTISNEPIDEYLVYRLLYPGYELWNEMGIYQRDLTGYEETP FT IAENRNFGKQCINCHTFNQNSPETMMVHVRGKSGGTLICKNGKVEKVNTKPEGFKNGGT FT YAAWHPSGRYIAFSMNEIQQFFHSSGQKPIEVSDLAADLIVYDTEKKTFLTDSLICGER FT YMETFPNWTPDGKTLYFCRGNAYKEKMPLDSIRYDLCRIGFDPESGKFGTPECVYRASE FT QGKSVSFPRVSPNGKYLMFTLSDYGNFSIWHPESELCLLTMDTGEIRLLNEVNSNDVES FT FHTWSSSGRWFVFSSKRLDGLWARPFFASFDPETGKAGKPFLMPQKDPDFYDTFTKTYN FT LPELIKQPVRNGNEMIEAIH" FT misc_feature complement(1066771..1066788) FT /note="PS00190 Cytochrome c family heme-binding site FT signature." FT misc_feature complement(1067251..1067283) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature complement(1067254..1067307) FT /note="Signal peptide predicted for BF0861 by SignalP 2.0 FT HMM (Signal peptide probability 0.984) with cleavage site FT probability 0.850 between residues 18 and 19" FT CDS complement(1067319..1068848) FT /transl_table=11 FT /locus_tag="BF9343_0824" FT /old_locus_tag="BF0862" FT /product="putative transmembrane protein" FT /note="no significant database matches" FT /db_xref="GOA:Q5LGY1" FT /db_xref="UniProtKB/TrEMBL:Q5LGY1" FT /protein_id="CAH06605.1" FT /translation="MGAFYLECPHFTYYLPPILMKRLPYLLFALLFIIYFLCYQGVLSH FT VIYYHEQHHLFLFSKEYFLKQIHTEGLLGYLTDFIIQFFYIPALGSAILAGILAGIYLL FT THYNIKKITGQPDILQLSLIPSVSLFIYTLPVDHSLTLIIGVFLGLLILGCVAFFISGI FT WKNITLRRINVPGKKKKLIISTALITIYAIGACYIFIHSYNMPERIMIMAEKSVKEKNW FT ENVLTQTEKYINSGRTNQLISYFHNLALYHTGKLPYQLFDYPQKLGVKALYFPWNSDSR FT ESEYGHFIYEDLGYINEAQRWEFEAMVVWGETAPHLLNLARYNIVNKRPEVARRFINLL FT KQSLFYRKDAEELEKQLYAGSVPGLRMALENNKEHPARFANVINIGPELQYLCEQDTTN FT RMAFEYLMSDLLLSNNVVRFVDNLKFIRHFKYPEMPPAYQEALYIYKLGVDGETFSKSG FT FNVSENTEKRFQRYYSLYKNRQMQRLKTEFGNTYWYYLNFISPYGDKIIRN" FT misc_feature complement(order(1068240..1068308,1068363..1068431, FT 1068441..1068497,1068534..1068602,1068705..1068773)) FT /note="5 probable transmembrane helices predicted for FT BF0862 by TMHMM2.0 at aa 26-48, 83-105, 118-136, 140-162 FT and 181-203" FT CDS complement(1068866..1070503) FT /transl_table=11 FT /locus_tag="BF9343_0825" FT /old_locus_tag="BF0863" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2195 SWALL:AAO77302 (EMBL:AE016935) (580 aa) FT fasta scores: E(): 5.4e-20, 30.17% id in 580 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT4089 FT SWALL:AAO79194 (EMBL:AE016943) (598 aa) fasta scores: E(): FT 5e-19, 28.89% id in 623 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT0141 SWALL:AAO75248 FT (EMBL:AE016926) (579 aa) fasta scores: E(): 4.7e-16, 29.62% FT id in 611 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LGY0" FT /protein_id="CAH06606.1" FT /translation="MKKNYLYIFATALVVGFSSCSDFLDRYPQEELSDGSFWKTPDDAN FT KVVSDLYGYLSTWDQDNDINSDNATMGIKWAAGNVSKGIYDPADQGWSGDYANVRQCNL FT ILSKIDEIPDYPEADKTKALGQVYFFRAYIYFNLIRSFGDVPYIDKPLDLKDMEGITRM FT PRAEVYEKIMADFDKAIAALPTEWGASDYGRVTKGAAMAMKARAALYYGNWDTAATEAK FT NVMDLGLYELYDKDNTGKYAELFWEKADGCDEFILVTQFNYPDKTHYLMGWECFPTKGW FT GGMNPTQSLVDAFEDSEGAPISKSKIYDPTDPFKNRDPRLEVDILHDGEEMYGVTIKVA FT PLASSGSTGINQHNDATETGYYGQKWLDPSLDPLSDGWNMGKDWVHIRYAEVLLTYAEA FT KNELQGLDPEAFDAVNQVRRRVGMPELQNTDPSKPTYCATQDDLRQRIRNEWRVEFCLE FT GGKRMWDIRRWGIAKDVLNAPFEGLKYKIVDNPNDPDKKVDGGKMCILYQGDPIILSGS FT RYSDNNYLFPVPQSEIDLNPALTQNPGY" FT misc_feature complement(1070441..1070503) FT /note="Signal peptide predicted for BF0863 by SignalP 2.0 FT HMM (Signal peptide probability 0.650) with cleavage site FT probability 0.340 between residues 21 and 22" FT misc_feature complement(1070444..1070476) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(1070525..1073572) FT /transl_table=11 FT /locus_tag="BF9343_0826" FT /old_locus_tag="BF0864" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2362 SWALL:Q8A580 (EMBL:AE016935) (1028 aa) fasta FT scores: E(): 4.2e-84, 30.02% id in 1039 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT3569 FT SWALL:Q8A1T9 (EMBL:AE016941) (1021 aa) fasta scores: E(): FT 1.4e-75, 30.71% id in 1042 aa" FT /db_xref="GOA:Q5LGX9" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LGX9" FT /protein_id="CAH06607.1" FT /translation="MNEVFKNSGYTYKIVDNQIVVSTAAVTTNNVQVTQQQKQRKVSGI FT IKDTTGEPVIGASVVEKGNPTNGTITDIDGKFSLTVGGNELQVTYIGYVPEIVSLKAGV FT SSYNITMKEDTKTLDEVVVVGYGVQKKANLTGSVSSINAEALESRSVSSVSAAMAGTMP FT GVTAIQSSGAPGLQTGTITVRGKNSVNAANPLVIVDGVPGSMNTIDPQDIESLTVLKDA FT ASAAIYGVQAANGVILITTKKGKKGQDAKVSYSGSVAWATPTAKLNFLGAADYAMLYNE FT AVKNENPNASLPYSDEDIELFRNGSDPIGHPNTDWYKETFKNFAFEQQHNFSINGGSEK FT TNYSASVGYLYQGGLTNENDYNRFTGRINVESEISKWFSAGLNVSGYRGTREDGAVGFG FT TLMSEVTRNSPTLPVYNEDGTFNYSGKANPVAELGRTGFYRQMDQQLNAILHATVHILP FT ELSVKGLFSVRNDIRNIDYFKKHYSYGSGSNIADSGLREGYDKYYIWNEYTSQLLVNYN FT KSFQKHTIGALFGFEQWEQIYKYTEATRKGGGSDELTESLNTLDKSSQTNSDGGTELAR FT RSYFGRIQYDYADRYLFEANLRADASSRFPKDNRWGVFPAFSAGWRISEENFIKDNLDW FT MSNLKLRLGWGRTGNEELSDIYPAVATYAYGSYMFGNTLNTTAYEARYVNSALQWATVT FT NYEIGLDAGFLNNKLGFELSVYKKKTDDMLLKLPVQGILGMSAPVQNAGSVENTGFDLN FT IFHNNRINKDFSYAVNLNLAYVKNRITNLEGTEGEDPDNNKLWRLEGYPIGSFYGYKAI FT GYFNTEEELANEPKRTGTEKLGDIKYADLNGDGKIDAANDRTVIGQNFPSWTGGLSINL FT FWKDFDFSALFQGAFDVDKYCEAESSYAFYNGGKVLKKHLDRWTPENHNASYPRITKDS FT QTNFVTSSFWLEDGSYVRLKNVSLGYNLPKSWLNRIGVSRIKVYIAGENLLTFCGLEDI FT DPEESSTRGWSYTNVKKVSLGLKVSF" FT misc_feature complement(1070528..1073179) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -18.1, E-value 0.00049" FT repeat_region complement(1073513..1074008) FT /note="hit to rep2 1..496 score: 2408 percent id: 98.39" FT repeat_region 1073991..1079515 FT /note="invertible region R; active in shotgun" FT CDS complement(1074153..1075913) FT /transl_table=11 FT /locus_tag="BF9343_0827" FT /old_locus_tag="BF0865" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2893 SWALL:AAO77999 (EMBL:AE016937) (624 aa) FT fasta scores: E(): 3e-13, 25.17% id in 564 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT0866 FT SWALL:AAO75973 (EMBL:AE016929) (632 aa) fasta scores: E(): FT 2.8e-12, 23.54% id in 654 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT4633 SWALL:AAO79738 FT (EMBL:AE016946) (627 aa) fasta scores: E(): 7.9e-12, 23.91% FT id in 577 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LGX8" FT /protein_id="CAH06608.1" FT /translation="MKNNIRKIALGLCLTGALTACDLDVVPPADIAAENFWQTEKDAWY FT ALNTCYATLDGVDIWDELCTDNAHSHKPWEGNFEMVQQNGISTANGYGSYYFGTVRIVN FT NFIANIDKCAVSEELKTRMKAEARFFRALSYLDLTTKFGKVPVITEVLAYDAPNVKRDE FT VETVRKFILDELAEIAEILPDSYNGSYLYETGRITRAGALALRARAALYFGNYAEAEAS FT AGKIISEGHHSLFRVSSLTTAQQKEADEMDAYIDYAAKGIDKDKFVKGMFSYESLWHKG FT NASPANPEYIVTREYMADANNYDWTRYTYFIPKSFSQYDGYCSYEPMQDLIDAYWDVDG FT KTMRNDITMEQRKERYAEIWKDFKDMSQSQFIEKVPQTDIMKYDYMKEFRNRDSRLYVS FT MMFPFKGWHETIKGTFYFRWDPDLINKDGNESWTGYFYRKMVTLDPYDTWTAEEDYPVI FT RYAEVLLTYAEARIQNSGWDTEVQKALNDLRDRCGMPDVPTTMPSKEEALAFVRNERRI FT ELAAEGHRFDDIRRYGNDYCSKAMNGPSYAPNGYVVINKVWDNRLMLMPIPQGAIDLNP FT LLKDDQNPGY" FT misc_feature complement(1074543..1074569) FT /note="PS00037 Myb DNA-binding domain repeat signature 1." FT misc_feature complement(1075851..1075883) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature complement(1075854..1075913) FT /note="Signal peptide predicted for BF0865 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.920 between residues 20 and 21" FT CDS complement(1075942..1079352) FT /transl_table=11 FT /locus_tag="BF9343_0828" FT /old_locus_tag="BF0866" FT /product="putative outer membrane protein" FT /note="Similar to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrG SWALL:Q8VTA9 FT (EMBL:AF329100) (1137 aa) fasta scores: E(): 2e-42, 30.08% FT id in 1180 aa, and to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2461 SWALL:AAO77568 (EMBL:AE016936) (1134 aa) FT fasta scores: E(): 8.9e-112, 33.73% id in 1174 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT2196 FT SWALL:AAO77303 (EMBL:AE016935) (1120 aa) fasta scores: E(): FT 2e-105, 32.13% id in 1164 aa" FT /db_xref="GOA:Q5LGX7" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR011662" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LGX7" FT /protein_id="CAH06609.1" FT /translation="MKKCNLRWFSPQKIKRQLAFVLAICLVCIVPVTTYAQILKISMKR FT TNVSIQNVIRELEQKSGYTFFYNDNQVKLTKKVSVDVTDAPIENVLDQIFNNSGYTYKI FT IDNQIVVSAIKAEIPKTSSLQQQKSVRITGQVKDTTGEPIIGASVVEKGSASNGTITDV FT GGNFKLTVSGNEIQITYIGYIPQTVKIHPGVTDYSITMKEDTKTLDEVVVVGYGTQKKV FT NLTGSVASVSTDEIKDRVQTNVLSAVQGTVPGVTVISRPGQTPSINFRGRGNLGTSSPL FT YVIDGAIADATFFSNLDPNSIESISFLKDAASSAIYGSRAAYGVVLVTTKQGKSDKMNV FT SYSGYVGLSNPTYKPEYVNSTQYAELYNEALYNYNPKGGKYQGYTEEEIGYFRDGSKPD FT LYPNTDWNDLVLDKNVLTTQHSLDFSGGTDKIRYFIGLGYVYKDNMIPGQDSQRYNLNT FT NLSSDITKWLTVKAGVKYIRNDSDRDCGAPSLASFSMVPVTFVAKQSNGDWGTVNGGQT FT ATSNFITGNPLRALSKKDWSKSKSENTMYDLGFDIKPVKGLIISGQGVFKGYEYKSKSY FT TALQPNAINYFSGEEIAGTGVTKNKMSMDWQSTNTMLYTATARYDWSNDKHAVGALVGT FT SYEHYKYERLAGSREEFPSDALTDMEAGSTSGAGYTNGAGSSEYKMLSYFARVNYTLMD FT RYLFEVNMRADASSRFHKDHRWGYFPSFSAGWRMSEESFMKDIEWINNLKIRASYGTLG FT NINNVGNYDYFQNYSSGNHYNFSDSPVIGIGESKPANETLGWEKVALTDIGLDFDIFNG FT LLGVTADYYIKNTSDILLGYNVPTETGITAAPSQNIGKVKNTGFELALNHRNKIGAVNY FT SIGANIATNKNKITNLGGSDNIIQTSSYIVKYILKKGESIGSFYGFKTDGLYTQADIDA FT GHYYTLSGVVPNAGDIKFVPQRDIEYKQEITDEDRTILGKDVPDFTYGVNLSLQYKGFE FT FSMFGQGISGTKVAFDVYGVHPFYHGQDSPRKYHLKRWTEENPNPHAAYPRIYSASSVH FT TTYNRNFSDYHLFDSDYFRFKTLSLGYTVPSATVKNWGLQSLKVYVTGENLFTVRADKK FT MEDFDPETAGGVIYTLGTKSVAFGVNISF" FT misc_feature complement(1075945..1078689) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 1.5, E-value 0.00016" FT misc_feature complement(1077313..1077399) FT /note="PS00402 Binding-protein-dependent transport systems FT inner membrane comp. sign." FT misc_feature complement(1079236..1079295) FT /note="1 probable transmembrane helix predicted for BF0866 FT by TMHMM2.0 at aa 20-39" FT misc_feature complement(1079245..1079352) FT /note="Signal peptide predicted for BF0866 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.984 between residues 36 and 37" FT repeat_region 1079501..1087414 FT /note="invertible region S; active in shotgun" FT CDS complement(1079643..1081409) FT /transl_table=11 FT /locus_tag="BF9343_0829" FT /old_locus_tag="BF0867" FT /product="possible outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2365 SWALL:AAO77472 (EMBL:AE016935) (497 aa) FT fasta scores: E(): 5e-08, 28.15% id in 611 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT1553 FT SWALL:AAO76660 (EMBL:AE016932) (442 aa) fasta scores: E(): FT 6e-08, 26.3% id in 327 aa" FT /db_xref="GOA:Q5LGX6" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LGX6" FT /protein_id="CAH06610.1" FT /translation="MKKIITLLCAVATLTACDIDRLPYGSMSAEQITQDPTSSLESLVN FT GCYAQLKSWSDPMHRLGEYAGDNMAKDKSSTDAFFDFISYSRDADNYRLQSFWDSGYKA FT IAQASNIIKMIDEGKSKTIDYQLGECYYIRGMMYFYLGRAFGRPYWDKPEGHMGVPIVN FT GTPDDVNNLNLPDRSTVQDTYEQAIDDLKVAARLMENGETKREGPAYASKEAAWAMLSR FT IYLFMSGTYEAPNSENAQLAIDYATRVIESTTSEGGLKYELLSRENFMRYNTFMPENNK FT ESIFVVKIMASEKPDYWNSIGGMYSYAGQQGWGEMYASAKYMDLLNEQGRNDWRPDKKK FT IVDARANFISPSYITDSDGKYVEVFRFIKNVYNKNNIHTGYTYVQLPISKRGNTVTCKE FT GETNYTLSLINSSEEKYSINYSDGQTYSGVIDYEIELSSGQPKFYILKCSNEGTASGEA FT ESQLHSPVISRLGEVYLNRAEAYAKKGDYSHAQADLNIIRERSLPGRGYNDLNASNAKV FT RIEKERQLELAYQAERSYDVFRNCETLTRKYPGVHDAMLEIPATDYRVIYFIPQSAINS FT YPGTLTQNPTSN" FT misc_feature complement(1081359..1081391) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature complement(1081362..1081409) FT /note="Signal peptide predicted for BF0867 by SignalP 2.0 FT HMM (Signal peptide probability 0.981) with cleavage site FT probability 0.889 between residues 16 and 17" FT CDS complement(1081423..1084734) FT /transl_table=11 FT /locus_tag="BF9343_0830" FT /old_locus_tag="BF0868" FT /product="putative TonB-linked outer membrane protein" FT /note="Similar to Bacteroides Caccae TonB-linked outer FT membrane protein OmpW SWALL:Q93FV1 (EMBL:AF305878) (947 aa) FT fasta scores: E(): 1.2e-33, 27.04% id in 991 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT3090 FT SWALL:AAO78196 (EMBL:AE016938) (999 aa) fasta scores: E(): FT 3.1e-80, 30.75% id in 1047 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT0206 SWALL:AAO75313 FT (EMBL:AE016926) (980 aa) fasta scores: E(): 2.3e-55, 29.43% FT id in 1009 aa" FT /db_xref="GOA:Q5LGX5" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR011662" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LGX5" FT /protein_id="CAH06611.1" FT /translation="MKKCNQKWFNPQKVKKQIAIAVAISLVCAIPISTFAQVLKFSIKK FT SNTSIQSVLQELEKESGYTFFYNDNQVKLDKKISINIEDASIEVVLNQIFENSGYSYRI FT VENQIVIYTTPTTTVQQTVQQKKQQKVTGVVKDIAGDPIIGASIIEKGSSSNGTITNVN FT GDFSLIVTGNELQVSYIGYIPQTINLKPGVSSYNVIMKEDTKTLDEVVVVGYSTQKKES FT LTGALQTVKSDKLKDITTPSVENMLNGKVPGVYVAPGSGQPGSGGAVVIRGQATLSGTT FT APLWVIDGVIVGSNAGALNPSDIETMTILKDAASTAIYGSQGANGVILVTTKNGKAEKM FT TVNVSAKVGISKLGRGNMEMMDGAELYDYYKSFSNQEAITFSRYNDKLRNCNFDWFDLA FT AQTGVTQDYNVSLSGGNEKIRSFLSIGVYDEEGAVKGYDYTRYNFRLKTTYKPFEWLSI FT KPALAGSRRDIEDKQYDVTSMFQRLPWDSPFDEEGNLVPNRYTGWVNSSNSNYLYDLQW FT NKSNSTNYEFMGNLDFDIRITDWLSFSSVNNYKYIGYNYSEYTDPRSSSGEGVDGRMRE FT YQTTTVRRYSNHIIRFNKMFGKHSINALAAYEFNDYWAKATDMYGIGFIPGFEVLDVVA FT KPEKVGGSISEWAVQSLLFNANYAFDNKYLAQLSFRRDGASNFGDNAKYGNFFSISAGW FT NINREKWFHASWVDILKLRISYGSVGNRPSSLYPQYDLYSVSSKYNEESGALISQLGNK FT DLTWEKTYTTGTGIDVAFFDNRLRASFDWYNKYTSNILYAVPISGLVGVTSMWKNIGEM FT QNQGFELSIGGDIIRTKDWDWNIEINLGHNKNKLKKLYKTKNAEGQFVEKPIIISDGTS FT IAGTAKRVLQPGYPCDTYYLKEWAGVNPENGAPQWYKTVENEDGTLSRQKTSNYSEADQ FT VKCGSSSPDIFGGFSTVLRWKDIDLNAVFGYSVGGQIYNYSRQEYDSDGAYNDRNQMKL FT QKGWNRWEKPGDIATHPVASYSNTSKSNSSSSRYLEKNDYLKLRSLSIGYNLKLPQYYI FT NNMRIFFTGENLFCVTNYSGVDPEIPASDGSVIGTALPSVYPTVRKFMFGLNLTF" FT misc_feature complement(1081426..1084074) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 5.2, E-value 0.00013" FT misc_feature complement(1084618..1084677) FT /note="1 probable transmembrane helix predicted for BF0868 FT by TMHMM2.0 at aa 20-39" FT misc_feature complement(1084627..1084734) FT /note="Signal peptide predicted for BF0868 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.988 between residues 36 and 37" FT CDS 1085650..1086198 FT /transl_table=11 FT /locus_tag="BF9343_0831" FT /old_locus_tag="BF0869" FT /product="putative RNA polymerase ECF-type sigma factor" FT /note="Similar to Bacteroides fragilis fragilis regulatory FT region RNA polymerase ECF-type sigma factor RpoE FT SWALL:Q8VTB1 (EMBL:AF329100) (187 aa) fasta scores: E(): FT 7.7e-19, 41.11% id in 180 aa, and to Bacteroides FT thetaiotaomicron RNA polymerase ECF-type sigma factor FT BT4250 SWALL:Q89ZX1 (EMBL:AE016944) (181 aa) fasta scores: FT E(): 4.9e-34, 54.44% id in 180 aa, and to Bacteroides FT thetaiotaomicron RNA polymerase ECF-type sigma factor FT BT3010 SWALL:Q8A3E4 (EMBL:AE016938) (191 aa) fasta scores: FT E(): 4.3e-30, 51.59% id in 188 aa" FT /db_xref="GOA:Q5LGX4" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="InterPro:IPR014327" FT /db_xref="UniProtKB/TrEMBL:Q5LGX4" FT /protein_id="CAH06612.1" FT /translation="MTEKELIVSLKQGDEAAFTALYRMYWPKVHNFSRLYLSSIAEVEE FT VVQEVFVKLWEARIFLKENESFKGFLFIITRNIIFNQFRKSFNENAYKTTVLSSAEVEY FT DIENEMDAADLQGYIKKLISELTPRQQEVFHLSREEHLSYKEIAIRLSISEKTVERHIN FT EALKFLRKNIYLFFIFLSL" FT misc_feature 1085710..1085916 FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 39.7, E-value 5.6e-09" FT misc_feature 1086013..1086162 FT /note="Pfam match to entry PF04545 sigma70_r4, Sigma-70, FT region 4, score 56.8, E-value 4e-14" FT misc_feature 1086073..1086138 FT /note="Predicted helix-turn-helix motif with score FT 1912.000, SD 5.70 at aa 151-172, sequence FT LSYKEIAIRLSISEKTVERHIN" FT CDS 1086324..1087310 FT /transl_table=11 FT /locus_tag="BF9343_0832" FT /old_locus_tag="BF0870" FT /product="putative anti-sigma factor" FT /note="Similar to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrF SWALL:Q8VTB0 FT (EMBL:AF329100) (336 aa) fasta scores: E(): 3.8e-19, 28.27% FT id in 336 aa, and to Bacteroides thetaiotaomicron putative FT anti-sigma factor BT1618 SWALL:AAO76725 (EMBL:AE016932) FT (335 aa) fasta scores: E(): 2.7e-21, 32.5% id in 320 aa, FT and to Bacteroides thetaiotaomicron putative anti-sigma FT factor BT0965 SWALL:AAO76072 (EMBL:AE016929) (324 aa) fasta FT scores: E(): 1.3e-20, 30.86% id in 324 aa" FT /db_xref="InterPro:IPR006860" FT /db_xref="InterPro:IPR012373" FT /db_xref="UniProtKB/TrEMBL:Q5LGX3" FT /protein_id="CAH06613.1" FT /translation="MKQATTGNKDIIKKLLTDSLSPEEREKLNNYKFVNQAIYSQWEQA FT SDMYTDVDKEERMLTNVMHQIKKGKTGRFRQSLHRYGWVASIALLLICGTLSLMLLSRK FT AEPEVWYVLNSGRQSMDSVRLADGTLVMLNAGSRLTYPKEFSGNKREVTLSGQAFFSVH FT PDKVHPFVVKTKNMDVTALGTAFEVFSFDGDESVETVLLNGKVKVEPKDHKEQIKGEYI FT LQPNEKLTCQVNGDIRIDRVDANSYSAWRIGGRLSFKNETLAMILPRLEKWYGQKIDCP FT QKTADHYRFTFTLRNEPLDLILNIMSHSAPLNYKLISNDYYVLEELK" FT misc_feature 1086561..1086629 FT /note="1 probable transmembrane helix predicted for BF0870 FT by TMHMM2.0 at aa 80-102" FT misc_feature 1086687..1086887 FT /note="Pfam match to entry PF04773 FecR, FecR protein, FT score 33.9, E-value 1e-09" FT repeat_region 1087397..1087892 FT /note="hit to rep2 1..496 score: 2480 percent id: 100.00" FT CDS 1087602..1090946 FT /transl_table=11 FT /locus_tag="BF9343_0833" FT /old_locus_tag="BF0871" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT2196 SWALL:Q8A5P2 (EMBL:AE016935) (1120 aa) fasta FT scores: E(): 1.6e-82, 31.89% id in 1157 aa, and to FT Bacteroides fragilis FrrG SWALL:Q8VTA9 (EMBL:AF329100) FT (1137 aa) fasta scores: E(): 6.4e-34, 29.94% id in 1182 aa" FT /db_xref="GOA:Q5LGX2" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR011662" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LGX2" FT /protein_id="CAH06614.1" FT /translation="MKKHLAFALAVSLVAMVPVSAFAQVLKISMTKTNVSIENVLRELE FT KQSDYTFFYNDNQVKLNKKVSINVSDAPIETVLNEVFKNSGYTYKIVDNQIVVSTAAAA FT AKEVQATQQQKQRKISGVVKDAMGEAIIGASVIEKGNPTNGTITNIDGEFTLNTAGKEL FT QVTYIGYIPQAIVLKPGVNSYTVTMKEDTKTLDEVVVVGYGTQKKVNLTGAVSSVGADE FT LKERVNTNVLASVQGQVPGVTIISRPGSTPSINMRGRGNLGTSSPLFVIDGAIADASFF FT SSLDPNSIESISFLKDAASSAIYGSRAAYGVVLVKTKGGKEGDLKISYDGSVAVKMATY FT TPDVLGSEWYARLSNEAALNENPNTSTLPYTDKEIQMFRDGSNPDMYPNTNWYDLVLKD FT EAVMTKHSVSFSGGNKVKYFTSLGYMYDDDFTPGVKSERYNLTTNISSDIKSWLTMRSN FT INYIQSTSDNDKGGVVYTHLLTIPSTYVARQSNGEWGSYEGGKPAATVNMERNPLRRLE FT EGGWSNSKTQNTLINLALDIKPVKGLVLTGEMIYKAWDYKSKTYTANKSKIKDFQTGAE FT LNGTDVTNSKMEYSWEENSRLTYNALANYVWSNEKHNVNVLAGVSYEHYKYQKQKSYRL FT KFPTNGMTDMNGGSSAPDDTYAEGGSNEDKLMSYFGRVNYSFMDRYLLEANIRADASSR FT FHKDNRWGVFPSFSAGWRISQEEFMQDINWINNLKLRASWGQLGNINNVGQYDYFSSYQ FT QGGNYNFEDAIVSGIVESKPANPTLGWETVTITDIGVDFDIFNGLLNFTADYYNKKTDD FT ILLAYPSPKEIGIGSDFKVSQNIGTVSNKGLELSITHNKTLGDFAYTVGFNMSKNWNKV FT TNLGANDPIIESPWIKKVGYAIGTFYGYRSDGLLTQEDIDTGNYITDGLVPQAGDIKYV FT DLDGDGKLTDKDRTYIGCDVPDITYGVNLNLRYKGFELSMFGQGVTGTKVNFSMENAWA FT FSDYASPRKYHLKRWTVDNPNPNAAYPRIYPRTSKHSTYNQYFSDYWLFNADYFRIKNI FT TFGYSFQKPVLQKLSLEALKLYVAAENPFTIRADHRMEDFDPETASGRGVNTRGTSSIA FT FGVNLTF" FT misc_feature 1087602..1087670 FT /note="Signal peptide predicted for BF0871 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.994 between residues 31 and 32" FT misc_feature 1088226..1090490 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 1.0, E-value 0.00016" FT misc_feature 1089645..1089668 FT /note="PS00867 Carbamoyl-phosphate synthase subdomain FT signature 2." FT CDS 1090965..1092749 FT /transl_table=11 FT /locus_tag="BF9343_0834" FT /old_locus_tag="BF0872" FT /product="possible outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT0866 SWALL:AAO75973 (EMBL:AE016929) (632 aa) FT fasta scores: E(): 1.8e-12, 25.38% id in 658 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT4633 FT SWALL:AAO79738 (EMBL:AE016946) (627 aa) fasta scores: E(): FT 8.8e-12, 25.49% id in 612 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT2893 SWALL:AAO77999 FT (EMBL:AE016937) (624 aa) fasta scores: E(): 4e-09, 28.24% FT id in 524 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LGX1" FT /protein_id="CAH06615.1" FT /translation="MKTINKLFKGIFFCTLVSVSVSSCDLEVEPPANIAAETYWTSEKD FT AWYNLNSIYSDAIPGIGIYGDAYSDDVYCQYAHESKAKIFQQDGFSPLYDEGWNFETIR FT KENLFLQKVGNCEMDESLRERFKAEVRAMRAWTYLGMTMTFGKVPLITEVLDYNSPNIP FT RDEVSVIRDFIMKELTEAAAILPEKYAGGYPNEKGRITKYACLSLKARAALYFGDYALA FT ESTAKEVMDKGGFSLFKISSLSDAQKKEAEEMSLYIDFAEKGIDKDEFVKGMFNYEALW FT HTENANPDNPEYIMTRQYAASSWNYQDMTRYTSMRPNQLGGWSSVTPTQNLVDAYWGVD FT GHSVPQLPTPEERAKAYNQIKADLDAYQKPEGEAKFIAFCQEKIKNGTLKDYKYIQEFR FT NRDSRMYVSILMPFKSWYESNYGDKFVYEWIKNGNNESKTGFNFRKMLSLENDANGDGQ FT ATGDYPCIRYAEILLIYAEAHTQTTGYDAATEAALNQLRDRCGMPDVPSGLSKEEGLKL FT IQNERRIELAGEGFRGDDMTRYSDDYWKEHMNNVPIMTPDGDTELTMKWSSRMRLKPIP FT QTAIDLNPLLAGDQNPGY" FT misc_feature 1090965..1091033 FT /note="Signal peptide predicted for BF0872 by SignalP 2.0 FT HMM (Signal peptide probability 0.991) with cleavage site FT probability 0.888 between residues 23 and 24" FT misc_feature 1091004..1091036 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 1093409..1095169 FT /transl_table=11 FT /locus_tag="BF9343_0835" FT /old_locus_tag="BF0873" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGX0" FT /protein_id="CAH06616.1" FT /translation="MRALIYVVCLIGAMCGWSCSDHIADSSDLSVQTRTIVSPEGVSTS FT NPDLISDWEHQSLLTLSTGERINTPWTPGASHSMSEETVSDIKKEDGWTMLFHTFKALN FT ESPNSNYLCFYNELTGVIKVFYYIKNAQGNNGFQWRISTANGVGSSLLALNSYISPLDN FT SSDKPNCMNLSTFAQTPINGLTPGWNGFEFEVPYTTDYRNISLSINSYNQVITDFNFSG FT TTELKTEGTITKNVANGGGTTKTAATLASSGAKKYMDELKKKANGQPSNIAGDVKLGKK FT IVDALTSGNYFSAIAKGLKFIFGSTTTRPEVSKVSLTTTGVVTMGGTSQSGSHDNVEPL FT FSINLYDLMNGNLAALKKSPSFNSLVLPVDVTTRSGGERYAGVWTLKESPVIRMTRYGR FT VLNYNISGGVFTVASVLLPYLDSNVNKKASVILNPYLSQYVTSMQTMVDVVSCAKLNGE FT KYFNGYAISDFMSEDPIYEDKDLAIRKSAFSGSGGEICNQSISVSDYNIGDGGNQNMYF FT FDWGTNIKGDEVAVVTVNIAYNYKGKVHNISISRNYKVQYVHDPATDVKILGTAGTKKV FT VIVNNYPQFE" FT CDS complement(1095266..1096543) FT /transl_table=11 FT /locus_tag="BF9343_0836" FT /old_locus_tag="BF0874" FT /product="putative GFO/IDH/MOCA family oxidoreductase" FT /note="Similar to Shewanella oneidensis oxidoreductase, FT GFO/IDH/MOCA family so3120 SWALL:Q8ECL7 (EMBL:AE015749) FT (459 aa) fasta scores: E(): 1.1e-71, 44.97% id in 418 aa, FT and to Bacteroides thetaiotaomicron putative oxidoreductase FT BT4252 SWALL:AAO79357 (EMBL:AE016944) (419 aa) fasta FT scores: E(): 4.9e-144, 79.41% id in 413 aa, and to FT Bacteroides thetaiotaomicron putative oxidoreductase BT4243 FT SWALL:AAO79348 (EMBL:AE016944) (467 aa) fasta scores: E(): FT 2.6e-72, 49.3% id in 434 aa" FT /db_xref="GOA:Q5LGW9" FT /db_xref="InterPro:IPR000683" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGW9" FT /protein_id="CAH06617.1" FT /translation="MKTPSQTHVLGLAHPPLPMVRLAFIGLGNRGVLTLQRYLQIEGVE FT IKALCEIREGNLVKAQKILREAGYPQPDGYTGPDGWKRMCERDDIDLVFICTDWLTHTP FT MAVYSMEHGKHVAIEVPAAMTVEECWKLVDTAEKTRQHCMMLENCCYDPFALTTLNMAQ FT QGVFGEITHVEGAYIHDLRSIYFADESKGGFHNHWGKKYSIEHTGNPYPTHGLGPVCQI FT LNIHRGDRMNYLVSLSSLQAGMTEYARKNFGADSPEARQKYLLGDMNTTLIQTVKGKSI FT MIQYNVVTPRPYSRLHTVCGTKGFAQKYPVPSIALEPDAGSPLEGKALEEIMERYKHPF FT TATFGTEAHRRNLPNEMNYVMDCRLIYCLRNGLPLDMDVYDAAEWSCITELSEQSVLNG FT SIPVEIPDFTRGAWKKCHISRTSDLY" FT misc_feature complement(1096103..1096486) FT /note="Pfam match to entry PF01408 GFO_IDH_MocA, FT Oxidoreductase family, NAD-binding Rossmann fold, score FT 48.7, E-value 1.1e-11" FT tRNA complement(1096605..1096680) FT /note="tRNA Gly anticodon TCC, Cove score 69.50" FT tRNA complement(1096686..1096771) FT /note="tRNA Tyr anticodon GTA, Cove score 63.89" FT CDS complement(1096844..1097338) FT /transl_table=11 FT /gene="ribH" FT /locus_tag="BF9343_0837" FT /old_locus_tag="BF0875" FT /product="putative 6,7-dimethyl-8-ribityllumazine synthase" FT /EC_number="2.5.1.9" FT /note="Similar to Bacillus amyloliquefaciens FT 6,7-dimethyl-8-ribityllumazine synthase RibH FT SWALL:RISB_BACAM (SWALL:Q44681) (154 aa) fasta scores: E(): FT 6.9e-22, 48.17% id in 137 aa, and to Bacteroides FT thetaiotaomicron 6,7-dimethyl-8-ribityllumazine synthase FT BT4253 SWALL:Q89ZW8 (EMBL:AE016944) (143 aa) fasta scores: FT E(): 6.7e-50, 90.9% id in 143 aa, and to Anopheles gambiae FT str. PEST ebip293 SWALL:EAA02623 (EMBL:AAAB01005976) (146 FT aa) fasta scores: E(): 2.2e-26, 52.74% id in 146 aa. FT Possible alternative start site at codon 22" FT /db_xref="GOA:Q5LGW8" FT /db_xref="InterPro:IPR002180" FT /db_xref="UniProtKB/TrEMBL:Q5LGW8" FT /protein_id="CAH06618.1" FT /translation="MATAYHNLSDYDFNSVPNAEEMKFGIVVSEWNANITGALLDGAVK FT TLKKHGAKEENILVKTVPGSFELTFGANQMMENSDIDAIIIIGCVIKGDTPHFDYVCMG FT VTQGVAQLNATGDIPVIYGLITTNTMEQAEDRAGGKLGNKGDECAITAIKMIDFVWSLN FT K" FT misc_feature complement(1096853..1097284) FT /note="Pfam match to entry PF00885 DMRL_synthase, FT 6,7-dimethyl-8-ribityllumazine synthase, score 195.0, FT E-value 9.8e-56" FT CDS complement(1097424..1098107) FT /transl_table=11 FT /locus_tag="BF9343_0838" FT /old_locus_tag="BF0876" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4254 SWALL:AAO79359 (EMBL:AE016944) FT (227 aa) fasta scores: E(): 4.4e-66, 81.93% id in 227 aa, FT and to Chlorobium tepidum hypothetical protein CT1812 FT SWALL:Q8KBH5 (EMBL:AE012933) (247 aa) fasta scores: E(): FT 5.1e-08, 29.32% id in 208 aa" FT /db_xref="GOA:Q5LGW7" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="UniProtKB/TrEMBL:Q5LGW7" FT /protein_id="CAH06619.1" FT /translation="MAEQKNHNNELNVEDALTQSEAFLVKNKKAIIGAVVAVIVIVAGA FT ILYKNFYAEPREEKAQAALFKSEQYFEQSAYEQALNGDSIGSIGFLKVADQFSGTKAAN FT LAKAYAGICYQNLGKYEEAIKALDGFSGDDQMVAPAIQGAIGNCYAQLGQLDKATSALL FT KAADHADNSTLSPIFLLQAGEILMKQGKNEEAVKAFTKIKDKYFQSYQAMDIDKYIEQA FT KLLKK" FT misc_feature complement(1097505..1097582) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 9.2, E-value 0.071" FT misc_feature complement(1097592..1097693) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 16.4, E-value 0.00061" FT misc_feature complement(1097724..1097777) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 11.1, E-value 0.02" FT misc_feature complement(1097952..1098020) FT /note="1 probable transmembrane helix predicted for BF0876 FT by TMHMM2.0 at aa 30-52" FT CDS 1098268..1099380 FT /transl_table=11 FT /locus_tag="BF9343_0839" FT /old_locus_tag="BF0877" FT /product="putative DNA replication and repair protein" FT /note="Similar to Lactococcus lactis DNA replication and FT repair protein RecF SWALL:RECF_LACLC (SWALL:P50925) (357 FT aa) fasta scores: E(): 3.3e-29, 30.32% id in 366 aa, and to FT Bacteroides thetaiotaomicron DNA replication and repair FT protein RecF, ABC family ATPase BT4255 SWALL:AAO79360 FT (EMBL:AE016944) (369 aa) fasta scores: E(): 6.1e-130, FT 92.87% id in 365 aa, and to Leptospira interrogans FT recombination protein RecF SWALL:Q8GQD4 (EMBL:AF434658) FT (365 aa) fasta scores: E(): 2.5e-35, 33.69% id in 368 aa" FT /db_xref="GOA:Q5LGW6" FT /db_xref="InterPro:IPR001238" FT /db_xref="InterPro:IPR004604" FT /db_xref="InterPro:IPR018078" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGW6" FT /protein_id="CAH06620.1" FT /translation="MILKRISILNYKNLEQVELNFSAKLNCFFGQNGMGKTNLLDAVYF FT LSFCKSAGNPIDSQNIRHEQDFFVIQGFYEAMDGTPEEIYCGMKRRSKKQFKRNKKEYS FT RLSDHIGFIPLVMVSPADSELIAGGSDERRRFMDVVISQYDKEYLDALIRYNKALVQRN FT TLLKSEQPIEEELFLVWEEMMAQAGEVVFRKREAFISEFIPIFQSFYSYISQDKEQVGL FT TYESHARKASLLEVLKESRVRDKIMGYSLRGIHKDELNMLLGDFPIKREGSQGQNKTYL FT VALKLAQFDFLKRTGSTVPLLLLDDIFDKLDASRVEQIVKLVAGDNFGQIFITDTNREH FT LDRILYKVGSDYKMFRVESGAINEMEEKER" FT misc_feature 1098268..1098423 FT /note="Pfam match to entry PF02463 SMC_N, RecF/RecN/SMC N FT terminal domain, score 33.2, E-value 1.6e-09" FT misc_feature 1098355..1098378 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 1098997..1099032 FT /note="PS00192 Cytochrome b/b6 heme-ligand signature." FT CDS 1099377..1099667 FT /transl_table=11 FT /locus_tag="BF9343_0840" FT /old_locus_tag="BF0878" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4256 SWALL:AAO79361 (EMBL:AE016944) FT (95 aa) fasta scores: E(): 7.3e-30, 86.45% id in 96 aa" FT /db_xref="InterPro:IPR007922" FT /db_xref="UniProtKB/TrEMBL:Q5LGW5" FT /protein_id="CAH06621.1" FT /translation="MKRNDAEPIGKLIQKYLRQESLESPLNEQRLLDSWETVLGPTIMS FT YTRDLYIRNQVLYVHLTSAALRQELMMGRELLVRNLNQKVGATVITNIIFR" FT CDS complement(1099790..1100578) FT /transl_table=11 FT /locus_tag="BF9343_0841" FT /old_locus_tag="BF0879" FT /product="putative histidinol-phosphatase" FT /note="Similar to Bacillus subtilis histidinol-phosphatase FT HisK or HisJ SWALL:HIS9_BACSU (SWALL:O34411) (268 aa) fasta FT scores: E(): 4.2e-06, 25.68% id in 257 aa, and to FT Bacteroides thetaiotaomicron putative FT histidinol-phosphatase BT4257 SWALL:AAO79362 FT (EMBL:AE016944) (263 aa) fasta scores: E(): 2e-82, 75% id FT in 260 aa, and to Clostridium perfringens probable FT histidinol phosphatase HisB or CPE0972 SWALL:Q8XLR9 FT (EMBL:AP003188) (261 aa) fasta scores: E(): 8e-28, 37.08% FT id in 240 aa" FT /db_xref="GOA:Q5LGW4" FT /db_xref="InterPro:IPR004013" FT /db_xref="InterPro:IPR010140" FT /db_xref="InterPro:IPR016195" FT /db_xref="UniProtKB/TrEMBL:Q5LGW4" FT /protein_id="CAH06622.1" FT /translation="MKTNYHTHTTRCMHAVGDDEDYVRSAIKGGFQELGFSDHGPWKYH FT TDFVSDIRMLPEDLPEYIESIRALKEKYRNQISIKIGLEYEYFPEYIHWLKEIIKEYRL FT DYILFGNHHYHTDEKFPYFGHHTTNRDMLDLYEESTIEGMESGLFAYLAHPDLFMRSYP FT EFDKHCISVSRHICRAAARLHIPLEYNIGYVAINEARGITTYPCPQFWHIAANEGCTAI FT IGLDAHNNLDLENPTYYDRACQELNALKMPVIDTIPFLKY" FT CDS complement(1100575..1101030) FT /transl_table=11 FT /locus_tag="BF9343_0842" FT /old_locus_tag="BF0880" FT /product="putative 5-formyltetrahydrofolate cyclo-ligase" FT /note="Similar to Leptospira interrogans FT 5-formyltetrahydrofolate cyclo-ligase La1247 SWALL:Q8F6Q4 FT (EMBL:AE011306) (176 aa) fasta scores: E(): 4.9e-08, 28.94% FT id in 152 aa, and to Bacteroides thetaiotaomicron putative FT 5-formyltetrahydrofolate cyclo-ligase BT4258 SWALL:AAO79363 FT (EMBL:AE016944) (196 aa) fasta scores: E(): 1.2e-40, 70.47% FT id in 149 aa, and to Aquifex aeolicus hypothetical protein FT Aq_1731 SWALL:O67621 (EMBL:AE000753) (186 aa) fasta scores: FT E(): 8e-20, 39.73% id in 151 aa" FT /db_xref="GOA:Q5LGW3" FT /db_xref="InterPro:IPR002698" FT /db_xref="InterPro:IPR024185" FT /db_xref="UniProtKB/TrEMBL:Q5LGW3" FT /protein_id="CAH06623.1" FT /translation="MSEKVLITLEACPEFQKGHTILLYHSMKDEVQTHAFIEKWSRSKR FT IILPVVTGDELELRVYTGPQDLAIGSYGIAEPTGAPFTDYETIDLAVIPGVAFDRYGHR FT LGRGKGYYDRLLPQIPAPKVGICFPFQLIEEVPAEAFDFRMDTIIAQ" FT misc_feature complement(1100578..1101030) FT /note="Pfam match to entry PF01812 5-FTHF_cyc-lig, FT 5-formyltetrahydrofolate cyclo-ligase family, score 107.0, FT E-value 3.2e-29" FT CDS complement(1101035..1102762) FT /transl_table=11 FT /locus_tag="BF9343_0843" FT /old_locus_tag="BF0881" FT /product="putative carboxy-terminal protease" FT /note="Similar to Bartonella quintana carboxy-terminal FT protease CtpA SWALL:Q9ZF67 (EMBL:AF110497) (441 aa) fasta FT scores: E(): 8.4e-31, 32.21% id in 447 aa, and to FT Bacteroides thetaiotaomicron carboxy-terminal processing FT protease precursor BT4259 SWALL:AAO79364 (EMBL:AE016944) FT (582 aa) fasta scores: E(): 5.6e-181, 84% id in 569 aa, and FT to Bacteroides thetaiotaomicron carboxy-terminal processing FT protease precursor BT3035 SWALL:AAO78141 (EMBL:AE016938) FT (529 aa) fasta scores: E(): 4.5e-76, 44.62% id in 493 aa" FT /db_xref="GOA:Q5LGW2" FT /db_xref="InterPro:IPR001478" FT /db_xref="InterPro:IPR004447" FT /db_xref="InterPro:IPR005151" FT /db_xref="UniProtKB/TrEMBL:Q5LGW2" FT /protein_id="CAH06624.1" FT /translation="MSTKNSSRFTPVIIAISVVIGILIGTFYAKHFAGNRLGIINGSSN FT KLNALLRIVDDQYVDTVNMADLVEKAMPQILAELDPHSTYIPAQNLEEVTSELEGSFSG FT IGIQFTIQDDTIHVNSVIQGGPSEKVGLMAGDRIVMVDDSLFVGKKVTNERAMRTLKGP FT KGTQVKLGVKRATEKDLLNFTITRGDIPQNTIDAAYMLTDDFGYIQVSKFGRTTHVELL FT NAIALLNHKNCKGLIIDLRGNTGGYMEAAVRMVNEFLPEGKLIVYTEGRKYPRADEFAN FT GTGSCQKMPVIVLIDEGSASASEIFTGAIQDNDRGMVVGRRSFGKGLVQQPIDFSDGSA FT IRLTIARYYTPSGRCIQRPYQNGKDRNYEMDWLTRYEHGEYFSKDSIKLDENLRYSTAL FT GRPVYGGGGIMPDVFVPQDTTGVTSYLTEVLSKGLTIQFTFHYTDNNRDKLKKYEDEES FT LLNYLRRQGLVEQFIRYADSKGVKRRNILIQKSYKLLEKSIYGNIIYNMLGKEAYIQYL FT NQSDQTVKKAVELLESGEAFPKAPISVEPQKEEKKDGKKKTTAQVDSTGEEEILRLYA" FT misc_feature complement(1101986..1102039) FT /note="Pfam match to entry PF02906 Fe_hyd_lg_C, Iron only FT hydrogenase large subunit, C-terminal domain, score 12.5, FT E-value 2.8e-05" FT misc_feature complement(1102238..1102486) FT /note="Pfam match to entry PF00595 PDZ, PDZ domain (Also FT known as DHR or GLGF), score 45.4, E-value 1.1e-10" FT misc_feature complement(1102676..1102744) FT /note="1 probable transmembrane helix predicted for BF0881 FT by TMHMM2.0 at aa 7-29" FT CDS complement(1102840..1103277) FT /transl_table=11 FT /locus_tag="BF9343_0844" FT /old_locus_tag="BF0882" FT /product="putative deoxycytidylate deaminase" FT /note="Similar to Bacillus subtilis competence ComE operon FT protein 2 ComEB or ComE2 SWALL:CME2_BACSU (SWALL:P32393) FT (189 aa) fasta scores: E(): 2.4e-13, 38.4% id in 138 aa, FT and to Bacteroides thetaiotaomicron deoxycytidylate FT deaminase BT4260 SWALL:AAO79365 (EMBL:AE016944) (149 aa) FT fasta scores: E(): 5.9e-51, 90.27% id in 144 aa, and to FT Staphylococcus aureus late competence operon required for FT DNA binding and uptake ComEB or sav1589 or sa1417 or mw1540 FT SWALL:Q99TR0 (EMBL:AP003362) (153 aa) fasta scores: E(): FT 4.8e-15, 43.07% id in 130 aa" FT /db_xref="GOA:Q5LGW1" FT /db_xref="InterPro:IPR002125" FT /db_xref="InterPro:IPR015517" FT /db_xref="InterPro:IPR016192" FT /db_xref="InterPro:IPR016193" FT /db_xref="InterPro:IPR016473" FT /db_xref="UniProtKB/TrEMBL:Q5LGW1" FT /protein_id="CAH06625.1" FT /translation="MDTANSKQSDLDKRYIRMASIWSENSYCQRRKVGALIVKDKMIIS FT DGYNGTPSGFENVCEDDNNVTKPYVLHAEANAITKIARSNNSSDGATMYVTASPCIECA FT KLIIQAGIKRVVYSEHYRLEDGIELLKRAGIEVVFVDTSEK" FT misc_feature complement(1102921..1103253) FT /note="Pfam match to entry PF00383 dCMP_cyt_deam, Cytidine FT and deoxycytidylate deaminase zinc-binding region, score FT 114.9, E-value 1.3e-31" FT misc_feature complement(1102957..1103064) FT /note="PS00903 Cytidine and deoxycytidylate deaminases FT zinc-binding region signature." FT CDS complement(1103289..1103798) FT /transl_table=11 FT /locus_tag="BF9343_0845" FT /old_locus_tag="BF0883" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4261 SWALL:AAO79366 (EMBL:AE016944) (169 aa) FT fasta scores: E(): 1.3e-28, 51.23% id in 162 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGW0" FT /protein_id="CAH06626.1" FT /translation="MKYKYLLLLLLMLPFVSGCNDSDDVNGIFTGKVWKLTYITKKNEH FT KPYDFWGDKDKYEQSIKNYINKEGAYTIKFEGETTDNVISGKFSGTLLSHSYTGTWSAN FT GESNAFSASVKGSENDPLGFSNKFVEGLNRATSYKGNYDNLFIYYKDEGGRELCLVFHV FT DKDNNK" FT misc_feature complement(1103742..1103774) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature complement(1103745..1103798) FT /note="Signal peptide predicted for BF0883 by SignalP 2.0 FT HMM (Signal peptide probability 0.976) with cleavage site FT probability 0.545 between residues 18 and 19" FT CDS complement(1103805..1105919) FT /transl_table=11 FT /gene="dcp" FT /locus_tag="BF9343_0846" FT /old_locus_tag="BF0884" FT /product="putative peptidyl-dipeptidase" FT /EC_number="3.4.15.5" FT /note="Similar to Escherichia coli peptidyl-dipeptidase Dcp FT or B1538 SWALL:DCP_ECOLI (SWALL:P24171) (680 aa) fasta FT scores: E(): 3.7e-91, 38.91% id in 681 aa, and to FT Bacteroides thetaiotaomicron peptidyl-dipeptidase BT4262 FT SWALL:AAO79367 (EMBL:AE016944) (689 aa) fasta scores: E(): FT 1.1e-217, 79.44% id in 686 aa, and to Bacteroides FT thetaiotaomicron peptidyl-dipeptidase BT2834 SWALL:AAO77940 FT (EMBL:AE016937) (694 aa) fasta scores: E(): 7.9e-119, FT 47.05% id in 678 aa" FT /db_xref="GOA:Q5LGV9" FT /db_xref="InterPro:IPR001567" FT /db_xref="InterPro:IPR024077" FT /db_xref="InterPro:IPR024079" FT /db_xref="InterPro:IPR024080" FT /db_xref="UniProtKB/TrEMBL:Q5LGV9" FT /protein_id="CAH06627.1" FT /translation="MILCGEICNFVNVTLILLNMTNIANAQNPFFEKYTTPYGTVPFDK FT IKNEHYEPAIREGISRQAAEIDAIVNNPEAPTFANTILAYEKSGELLDRVTTVFGNLRS FT AETNDDLQKIAQEMIPLLSEHSNNISLNQELFERIKVVYGQKDSIELTPEQTKLLENAY FT NGFIRRGANLQGEAKEKYRELTKNLSKLTLDFSENNLKETNNYQLTLTDEAQLAGLPES FT AIEAAAETAREKGVNGWVFTLHAPSYIPFMTYADNRDLRRELYMAYNTKCTHDNEYNNL FT EIVKKIANIHMEIAQLLGYDNYAEYTLKERMAETGDAVYKLLNQLLDAYTPTAHKEYEA FT VQELARTEQGDAFEVMPWDWSYYSNKLKDRQFNINEEMLRPYFELSKVKAGVFGLATKL FT YGITFHKNPDIPVYHKDVDAYEVLDKDGSFLAVLYTDFHPREGKRSGAWMTEFKGQWIE FT DTGENSRPHVSVVMNFTKPTESKPALLTYDEVETFLHEFGHALHGMFANSTYQSLSGTN FT VYWDFVELPSQIMENFGIEKEFLHTFANHYQTGEPLPDELISRLVDASNFNVAYACLRQ FT VSFGLLDMAWYTRNTPFEGDVKAYERQAWAQAQILPTVSETCMSTQFSHIFAGGYSAGY FT YSYKWAEVLDADAFSLFKQKGIFNEEVANSFRNNILSKGGTEHPMILYKRFRGQEPTID FT ALLIRNGIKK" FT misc_feature complement(1103814..1105169) FT /note="Pfam match to entry PF01432 Peptidase_M3, Peptidase FT family M3, score 538.3, E-value 4.4e-159" FT misc_feature complement(1104417..1104446) FT /note="PS00142 Neutral zinc metallopeptidases, zinc-binding FT region signature." FT CDS complement(1106086..1107087) FT /transl_table=11 FT /gene="gap" FT /locus_tag="BF9343_0847" FT /old_locus_tag="BF0885" FT /product="putative glyceraldehyde 3-phosphate FT dehydrogenase" FT /EC_number="1.2.1.12" FT /note="Similar to previously sequenced Bacteroides fragilis FT glyceraldehyde 3-phosphate dehydrogenase Gap FT SWALL:G3P_BACFR (SWALL:Q59199) (299 aa) fasta scores: E(): FT 6.5e-108, 99.66% id in 299 aa, and to Ralstonia FT solanacearum glyceraldehyde 3-phosphate dehydrogenase GapA FT or Gap or RSC2749 or RS00105 SWALL:G3P_RALSO (SWALL:P52694) FT (332 aa) fasta scores: E(): 1.6e-95, 79.09% id in 330 aa, FT and to Xanthomonas axonopodis glyceraldehyde-3-phosphate FT dehydrogenase GapA or XAC3352 SWALL:Q8PHA7 (EMBL:AE011981) FT (333 aa) fasta scores: E(): 1.6e-93, 76.97% id in 330 aa" FT /db_xref="GOA:Q5LGV8" FT /db_xref="InterPro:IPR006424" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020828" FT /db_xref="InterPro:IPR020829" FT /db_xref="InterPro:IPR020830" FT /db_xref="InterPro:IPR020831" FT /db_xref="UniProtKB/TrEMBL:Q5LGV8" FT /protein_id="CAH06628.1" FT /translation="MIKVGINGFGRIGRMVFRAAVKNFGNDIQIVGINDLLDAEYLAYM FT LKYDSVHGRFEGEVAVEDGALIVNGNKIRLTAEMDPANLKWNEVDADVVVESTGFFLTD FT ETARKHIQAGAKKVIMSAPSKDSTPMFVYGVNHTSYAGQDIISNASCTTNCLAPIAKVL FT NDKFGIVKGLMTTVHAATATQKTVDGPSKKDWRGGRGILENIIPSSTGAAKAVGKVLPV FT LNGKLTGMAFRVPTSDVSVVDLTVVLEKAATMAEINAAMKEASEGELKGILGYTEDAVV FT STDFRGCANTSIYDSKAGISLDSNFAKVVSWYDNEWGYSNKVCEMARVIAAK" FT misc_feature complement(1106149..1106634) FT /note="Pfam match to entry PF02800 gpdh_C, Glyceraldehyde FT 3-phosphate dehydrogenase, C-terminal domain, score 394.9, FT E-value 6.8e-116" FT misc_feature complement(1106620..1106643) FT /note="PS00071 Glyceraldehyde 3-phosphate dehydrogenase FT active site." FT misc_feature complement(1106635..1107087) FT /note="Pfam match to entry PF00044 gpdh, Glyceraldehyde FT 3-phosphate dehydrogenase, NAD binding domain, score 334.0, FT E-value 1.4e-97" FT CDS 1107227..1107667 FT /transl_table=11 FT /gene="mscL" FT /locus_tag="BF9343_0848" FT /old_locus_tag="BF0886" FT /product="putative large-conductance mechanosensitive FT channel" FT /note="Similar to Salmonella typhimurium, and Salmonella FT typhi large-conductance mechanosensitive channel MscL or FT STM3410 or STY4387 or t4094 SWALL:MSCL_SALTY (SWALL:P39446) FT (137 aa) fasta scores: E(): 2.6e-22, 60.99% id in 141 aa, FT and to Bacteroides thetaiotaomicron putative ion channel FT BT4264 SWALL:AAO79369 (EMBL:AE016944) (148 aa) fasta FT scores: E(): 9.9e-44, 86.48% id in 148 aa, and to Yersinia FT pestis large-conductance mechanosensitive channel MscL or FT YPO0238 or Y4019 SWALL:MSCL_YERPE (SWALL:Q8ZJ83) (137 aa) FT fasta scores: E(): 8.2e-26, 59.85% id in 142 aa" FT /db_xref="GOA:Q5LGV7" FT /db_xref="InterPro:IPR001185" FT /db_xref="InterPro:IPR019823" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGV7" FT /protein_id="CAH06629.1" FT /translation="MGKSTFLQDFKAFAMKGNVVDMAVGVIIGGAFGKIVSSVVADIIM FT PPLGLLIGGVNFTDLKWVMKAAEYGADGKETAAAVTLNYGNFLQATFDFLIIAFSIFLF FT IKLITKLTQKKAEAPAAPPAPPAPTKEEILLTEIRDLLKEKQ" FT misc_feature 1107242..1107661 FT /note="Pfam match to entry PF01741 MscL, Large-conductance FT mechanosensitive channel, MscL, score 246.9, E-value FT 2.3e-71" FT misc_feature 1107272..1107313 FT /note="PS01327 Large-conductance mechanosensitive channels FT mscL family signature." FT misc_feature order(1107293..1107361,1107482..1107550) FT /note="2 probable transmembrane helices predicted for FT BF0886 by TMHMM2.0 at aa 23-45 and 86-108" FT CDS 1107698..1109221 FT /transl_table=11 FT /gene="guaA" FT /locus_tag="BF9343_0849" FT /old_locus_tag="BF0887" FT /product="putative GMP synthase [glutamine-hydrolyzing]" FT /EC_number="6.3.5.2" FT /note="Similar to Lactococcus lactis GMP synthase FT [glutamine-hydrolyzing] GuaA SWALL:GUAA_LACLC FT (SWALL:Q9Z6H4) (513 aa) fasta scores: E(): 1.5e-96, 51.77% FT id in 508 aa, and to Bacteroides thetaiotaomicron GMP FT synthase BT4265 SWALL:AAO79370 (EMBL:AE016944) (507 aa) FT fasta scores: E(): 3.3e-188, 95.85% id in 507 aa, and to FT Fusobacterium nucleatum GMP synthase FT [glutamine-hydrolyzing] GuaA or FN1444 SWALL:GUAA_FUSNN FT (SWALL:Q8RDR4) (512 aa) fasta scores: E(): 7e-106, 55.68% FT id in 510 aa" FT /db_xref="GOA:Q5LGV6" FT /db_xref="InterPro:IPR001674" FT /db_xref="InterPro:IPR004739" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR017926" FT /db_xref="InterPro:IPR022310" FT /db_xref="InterPro:IPR022955" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGV6" FT /protein_id="CAH06630.1" FT /translation="MQEKIIILDFGSQTTQLIGRRVRELDTYCEIVPYNKFPKGDETVK FT GVILSGSPFSVYDESAFKVDLSEIRGKYPILGICYGAQFMAYTNGGKVEPAGTREYGRA FT HLTSFCKDNVLFKGVREGTQVWMSHGDTITAIPENFKTIASTDKVAIAAYQVEGEQVWG FT VQFHPEVFHSEDGTQMLRNFVVDVCGCKQDWSPASFIESTVAELKAQLGDDKVVLGLSG FT GVDSSVAAVLLNRAIGKNLTCIFVDHGMLRKNEFKNVMHDYECLGLNVIGVDASEKFFS FT ELEGVTEPERKRKIIGKGFIDVFDEEAHKLKDVKWLAQGTIYPDCIESLSITGTVIKSH FT HNVGGLPEKMNLKLCEPLRLLFKDEVRRVGRELGMPEHLITRHPFPGPGLAVRILGDIT FT PEKVRILQDADDIFIQGLRDWGLYDQVWQAGVILLPVQSVGVMGDERTYERAVALRAVT FT STDAMTADWAHLPYEFLGKVSNDIINKVKGVNRVTYDISSKPPATIEWE" FT misc_feature 1107713..1108258 FT /note="Pfam match to entry PF00117 GATase, Glutamine FT amidotransferase class-I, score 127.5, E-value 2.1e-35" FT misc_feature 1107917..1107952 FT /note="PS00442 Glutamine amidotransferases class-I active FT site." FT misc_feature 1108856..1109215 FT /note="Pfam match to entry PF00958 GMP_synt_C, GMP synthase FT C terminal domain, score 226.4, E-value 3.5e-65" FT CDS complement(1109524..1109643) FT /transl_table=11 FT /locus_tag="BF9343_0850" FT /old_locus_tag="BF0888" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGV5" FT /protein_id="CAH06631.1" FT /translation="MHMALNQTLLLINIVNTICETFLYLLIKNKFFTSKGLVI" FT misc_feature complement(1109563..1109631) FT /note="1 probable transmembrane helix predicted for BF0888 FT by TMHMM2.0 at aa 5-27" FT CDS complement(1109826..1111850) FT /transl_table=11 FT /locus_tag="BF9343_0851" FT /old_locus_tag="BF0889" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2806 SWALL:AAO77912 (EMBL:AE016937) (666 aa) FT fasta scores: E(): 7.2e-77, 40.75% id in 692 aa, and FT C-terminus is similar to previously sequenced Bacteroides FT fragilis (fragment) hypothetical protein SWALL:BAC56894 FT (EMBL:AB102772) (218 aa) fasta scores: E(): 3.8e-42, 54.58% FT id in 218 aa, and entire CDS is similar to Bacteroides FT thetaiotaomicron hypothetical protein BT4358 SWALL:AAO79463 FT (EMBL:AE016945) (628 aa) fasta scores: E(): 5.2e-15, 24.33% FT id in 674 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LGV4" FT /protein_id="CAH06632.1" FT /translation="MRLKLKHIYFCSLIAMGGLAITSCEDFLDRSPISQVTPEKYFSTV FT DQVANYLNNYYNDYLDDSRNYKLYHQQAWNSGMQRNDANTDNLLADDSSLDYFAGNWQV FT GSGKSIQAPLNRIRTWNYLLEQVLPKEKEGSIQGSVEDLKHYIGEAYFFRAMAYYKALV FT KYGDYPIVDKVLPDQEEILLEYSTRAPRNEVARQILKDLDEAINRMHDQGFQNNQRINK FT QVAQLYKSRVALFEATFEKYHRGTGRVPGDESWPGAKMSYNSGKTFNIDGEIDFFLTEA FT MNAAAAVADHCTLTENSHVLNPEYGQIYNWNPYYEMFSTPDASGYSEVLLWKQYDKSLN FT VSHCAPARLQNGDRTGLTRGFITTFLMKSGLPIYAAGNEYHGDVSISDEKENRDERLQL FT FVWGEKDVLHSDTKNPAVAAAGTTLLFGVPNIISEQKQTQDLTGYRPRKAHTYDYAQTK FT GDELLGTNACVVFRSAEANLNYMEACYEKTGSLDAKAQKYWKALRTRAGVDDDYAKTIA FT ATDLSKENDLAVYSGSKMVDVTLYNIRRERRCEFIGEGMRWDDLKRWRSWDQLLTKPYI FT IEGINFWDAAYKDHKDIKDDGTLDANVSPKSDSKYLRPLRRTSINNELYDGLTWRKAFY FT LDPIGIEDMSLTATNPEDINTTQLYQNPYWPMTAGKALE" FT misc_feature complement(1110912..1110977) FT /note="Predicted helix-turn-helix motif with score FT 1053.000, SD 2.77 at aa 292-313, sequence FT CTLTENSHVLNPEYGQIYNWNP" FT misc_feature complement(1111779..1111811) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature complement(1111782..1111850) FT /note="Signal peptide predicted for BF0889 by SignalP 2.0 FT HMM (Signal peptide probability 0.630) with cleavage site FT probability 0.254 between residues 23 and 24" FT CDS complement(1111866..1115135) FT /transl_table=11 FT /locus_tag="BF9343_0852" FT /old_locus_tag="BF0890" FT /product="putative outer membrane receptor protein" FT /note="Similar to Porphyromonas gingivalis receptor antigen FT RagA SWALL:Q9ZA60 (EMBL:AJ130872) (1017 aa) fasta scores: FT E(): 4.7e-35, 27.39% id in 1077 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT2805 SWALL:AAO77911 FT (EMBL:AE016937) (1083 aa) fasta scores: E(): 8.8e-192, FT 48.2% id in 1060 aa, and to Bacteroides thetaiotaomicron FT putative outer membrane protein, probably involved in FT nutrient binding BT4357 SWALL:AAO79462 (EMBL:AE016945) FT (1178 aa) fasta scores: E(): 7e-94, 36.63% id in 1081 aa" FT /db_xref="GOA:Q5LGV3" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LGV3" FT /protein_id="CAH06633.1" FT /translation="MKEKTNLFPSLIRLRETSRLKMAIAASIMLWCATPQQATADTNEE FT HAIEAVQQAKVKVKGTVVDETGEPMIGVAVKVLANNTGTITDLEGKFSVEAPLGGAIQI FT SFIGYKTVTVKASSEPISVTLKEDSQQLDEVVVVGYGSQKKVNVTGSVSMVDSKVIESR FT PVQNVSQALQGVVPGLNMSVGNSGGALDSSLSINIRGAGTIGEGSSGSPLVLIDGIEGD FT MNTVNPNDIENISVLKDAASSSIYGARASFGVIMITTKSGKSGKTRVNYSGNVRFSDAI FT QIPEMVDSYTFAQYFNRANTNDGGGLVFDEAALERIKNYQTGKYTDPNTPEYYGAKAGN FT DGKWQNYTGSFANTDWFKEFYKNWVPSTEHNLNISGGTDKLTYMISGSFLDQKGLLRHG FT EDQFNRYTMNAKISAKLTDWVTLNYTSKWTREDYDRPTYMTGLFFHNIARRWPTCPVRD FT PNGHYQQKMEIIEMEDGGKQTSQKNWYTQQLQAIFEPIKDWRIVAEGSMRTYTRKQSWA FT VLPIYAYDADNQPYLLGWGDNAAGYSEVQDSRESEDYFSTNIYTDFAKTFGDHNFKIMV FT GFNGELYRPSGLTGFGTDLISPEVPSLGLTQDNKKASSWASEKAIAGFFGRLNYNYKER FT YMLEANLRYDGSSRFIGDKRWGLFPSFSAGWNISREAFFEPLTQVVGTLKLRGSWGQLG FT NNNTSETNAWYPFYQNMPTGSASSGWLINGKKQNVAGLPGIVSSLMTWETIESWNVGID FT WGLFDNRLTGSFDYYNRYTYDMIGPAPTLPSVLGASAPQINNCDMKSYGWELELSWRDR FT IQQFNYGVRLVMSDNMQKILEYPNKTLSLGEKYYTGKTIGEIWGYKTIGIAQTQEEMDK FT HLANGGKPNWGSAWGAGDIMYANIDGKDGVNSGANTVNDHGDLKIIGNSTPRYNFGLTL FT DGSWKGLDFSLFIQGVMKRDYMLDGPYFWGANGGMWQSCVFKEHLDYWRPEGDPLGANT FT NAYYPKPYFSSNKNQKTQSGYLQNAAYCRLKNAQIGYTLPKAWTKKAAMESVRVYVSGD FT NLLTISGISDIFDPETLGGDWGPGKLYPLQRTISIGLNVNF" FT misc_feature complement(1111869..1114700) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 13.9, E-value 7.9e-05" FT misc_feature complement(1113924..1113953) FT /note="PS00175 Phosphoglycerate mutase family FT phosphohistidine signature." FT misc_feature complement(1115016..1115135) FT /note="Signal peptide predicted for BF0890 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.942 between residues 40 and 41" FT CDS complement(1115756..1115908) FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0853" FT /old_locus_tag="BF0891" FT /product="conserved hypothetical protein (fragment)" FT /note="Fragment. Similar to the N-terminus of Vibrio FT parahaemolyticus conserved hypothetical protein VP2976 FT SWALL:BAC61239 (EMBL:AP005083) (156 aa) fasta scores: E(): FT 1.6, 40.54% id in 37 aa" FT CDS complement(1116065..1118107) FT /transl_table=11 FT /locus_tag="BF9343_0854" FT /old_locus_tag="BF0892" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2806 SWALL:AAO77912 (EMBL:AE016937) (666 aa) FT fasta scores: E(): 1.1e-94, 41.75% id in 685 aa, and FT C-terminus is similar to previously sequenced Bacteroides FT fragilis (fragment) hypothetical protein SWALL:BAC56894 FT (EMBL:AB102772) (218 aa) fasta scores: E(): 7.7e-50, 60.71% FT id in 224 aa, and entire CDS is similar to Bacteroides FT thetaiotaomicron hypothetical protein BT4685 SWALL:AAO79790 FT (EMBL:AE016946) (171 aa) fasta scores: E(): 9.4e-14, 39.28% FT id in 140 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="UniProtKB/TrEMBL:Q5LGV2" FT /protein_id="CAH06635.1" FT /translation="MKLKNRIIQLCVLTGGVLLFPSCNDFLDREPLDQVTPESYFQNAD FT HLAAYSISKYQNLFSTHSGFSAGTVNNDGATDNMVSGGSSGSGLQNYYTKDVWKTEAAN FT DNWDFSFFRYCNYFFEKVLPKYEAGEISGNADDVKHYIGEMYFIRAWKYFQKLRMYGDY FT PIITEVLPDNAEILIEKGVRQPRNKVARFILEDLDKAAEYMHDHGFAGNNRLNKQCALL FT IKSRVALYEATFEKYHQGTGRVPGDANWPGKRVHPDYKYDANTEINFFLDQAMSAAEQV FT ADVIKLTPNSGVFNPANDNDISGWNDYFDMFSAEDMSGFEEVLFWRDYYSGDFTIAHGA FT TAYVASGGNNGMLHNYVQSFLMKDGMPWYAATAAYPFKGDERVMDEKANRDERLQLFLF FT GEEDMIPAVSNATTNAMKTYQDANYPNIIVAESEIKDLTGYRIRKCLSYDQKQYVSGQA FT QSTTGCVIFRAVEAYLNYMEAACMKNNGNVTGKAAEYWRAVRIRAGVDPDFTKTIAATD FT LSKENDLAKYKGENEMIDVTLFNIRRERRCEFIGEGMRMDDLIRWRSLDRLLVERFIPE FT GFNFWGSDAYKRYEGEDAKFEYIEGPDNAMANVSSRKLSNYLRPYSVVQKNNEIYDGYT FT WAKAHYLYPIPIRQIELLSPSGEIASSVIYQNPYWPEERNTAAIE" FT CDS complement(1118121..1121387) FT /transl_table=11 FT /locus_tag="BF9343_0855" FT /old_locus_tag="BF0893" FT /product="putative outer membrane receptor protein" FT /note="Similar to Porphyromonas gingivalis receptor antigen FT RagA SWALL:Q9ZA60 (EMBL:AJ130872) (1017 aa) fasta scores: FT E(): 1.2e-38, 28.96% id in 1084 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT2805 SWALL:AAO77911 FT (EMBL:AE016937) (1083 aa) fasta scores: E(): 3.4e-182, FT 46.39% id in 1054 aa, and to Bacteroides thetaiotaomicron FT putative outer membrane protein, probably involved in FT nutrient binding BT1619 SWALL:AAO76726 (EMBL:AE016932) FT (1150 aa) fasta scores: E(): 1.8e-110, 36.1% id in 1094 aa" FT /db_xref="GOA:Q5LGV1" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LGV1" FT /protein_id="CAH06636.1" FT /translation="MTKKINLFPSLIRFRETNRLKMAIAASIMLWCMAPQQAVADTYEK FT HEVASIQQQKVKANGTVVDQTGEPLIGVSVKVKDAPNGTITNLDGKFSIDVAKGATLEI FT SYVGYKTVIVKAESTPMHIVLKEDSEMIDEVVVVGYGSQKKVNVTGAVGMVNSEVLEAR FT PVQNVSQALQGVVPGLNLSVNNGGGSLDSEMSINIRGTGTIGDGSGSSPLVLIDGIEGS FT LNTVNPNDIESVSVLKDAASASIYGARAAFGVVLVKTKSGQSGKPRVTYSGNVRFSDAT FT NIPEMLDSYTFAQYFNRAAANDNGGTVFSKEQLERIKAYQDGTLKSSATFNEQSRRWNY FT YTGSNANTDWFKEVYEDWVPSMDHNLSISGGTDKTQYIVSGSFLDQKGLIRHGKDTFQR FT YTLNGRITSNITDWFTLGYSTKWTREDYDRPSYLTGLFFHNVARRWPTVPVYDDNGYLT FT EPSELIQLEDGGRQINQKDLFTQQLQLTFEPIKNWKIYVEGSLRVTANNQHWEVLPVYQ FT HDVDGNPVGMTWDAGVGSYPVGGSKVSEYAYKENYYSTNIYSDYFKQLDNGHYFKAMVG FT FNAELYKDRSVSADKSTLITPSVPTINTAVGEPSVAGGYRHTSVAGFFARLNWNYKDRY FT MLEANGRYDGSSRFIGDKRWGFFPSFSGGWNIAREAFFEETANKLKIGTLKLRASWGQL FT GNTNTNEAWYPFYQTLPQGQNYGWLVNGVRQNYASNPGIVSSEKTWETIETWDAGLDWG FT LFNNRLTGSFDYFVRYTYDMIATAPELPSILGTGVPKINNADMKSYGFELEIGWRDRIK FT NFSYGVKFVLSDAQQKILKYNNPDKSLSNPYYEGQKLGEIWGYKTIGIAQSDEEMNQHL FT ANAKQPMGQKWAAGDIMYADLDNSGSVDQGNYKVGDSGDWQIIGNNTPRFNYGITIDAA FT WKGLDFRAFVQGIGKRDYWLNGPYFWGFSGGGEWASAGFKEHWDFWRPEGDPLGANTNS FT YFARVIRGTSKNQQRQTRYLQDASYWRLKNIQIGYTLPKVWTKKAGMESVRVYVSGDNL FT LTVSDITGVFDPENLGTQWTDPGKVYPLQKVIAIGLTVNF" FT misc_feature complement(1118124..1120952) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score -1.5, E-value 0.00019" FT misc_feature complement(1121268..1121387) FT /note="Signal peptide predicted for BF0893 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.962 between residues 40 and 41" FT repeat_region 1121563..1121584 FT /note="Inverted repeat for invertible region Z" FT repeat_region 1121569..1121954 FT /note="invertible region Z; inactive in shotgun" FT repeat_region complement(1121933..1121960) FT /note="Inverted repeat for invertible region Z" FT CDS 1122305..1123162 FT /transl_table=11 FT /locus_tag="BF9343_0856" FT /old_locus_tag="BF0894" FT /product="putative enoyl-[acyl-carrier-protein] reductase FT [NADH]" FT /note="Similar to Pseudomonas aeruginosa FT enoyl-[acyl-carrier-protein] reductase [NADH] FabI or FT pa1806 SWALL:FABI_PSEAE (SWALL:Q9ZFE4) (265 aa) fasta FT scores: E(): 7.2e-14, 29.85% id in 268 aa, and to FT Bacteroides thetaiotaomicron enoyl-[acyl-carrier-protein] FT reductase BT4188 SWALL:Q8A033 (EMBL:AE016944) (285 aa) FT fasta scores: E(): 8.3e-101, 91.22% id in 285 aa, and to FT Chlorobium tepidum enoyl-[acyl-carrier-protein] reductase FT [NADH] FabI or CT0350 SWALL:Q8KFH6 (EMBL:AE012813) (293 aa) FT fasta scores: E(): 1.7e-52, 51.28% id in 273 aa" FT /db_xref="GOA:Q5LGV0" FT /db_xref="InterPro:IPR014358" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q5LGV0" FT /protein_id="CAH06637.1" FT /translation="MSYNLLKGKRGIIFGALNEQSIAWKVAERAVEEGAVITLSNTPVA FT VRMGQVSALSEKLNCEVIAADATNVEDLENVFKRSMEVLGGQIDFVLHSIGMSPNVRKK FT RTYDDLDYNMLNTTLDVSAVSFHKMIQAAKKQNAIAEYGSIVALSYVAAQRTFYGYNDM FT ADAKALLESIARSFGYIYGREHNVRVNTISQSPTFTTAGSGVKGMDKLYDFANRMSPLG FT NASADECADYCIVMFSDLTRKVTMQNLFHDGGFSSVGMSLRAMATYEKGLDEYKDENGN FT IIYG" FT CDS 1123167..1124180 FT /transl_table=11 FT /locus_tag="BF9343_0857" FT /old_locus_tag="BF0895" FT /product="conserved hypothetical protein" FT /note="Similar to Cytophaga johnsonae gliding motility FT protein GldB SWALL:Q9WWY2 (EMBL:AF158372) (318 aa) fasta FT scores: E(): 1.8e-19, 26.08% id in 345 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT4189 SWALL:AAO79294 (EMBL:AE016944) (335 aa) fasta FT scores: E(): 1.2e-80, 61.19% id in 335 aa" FT /db_xref="InterPro:IPR019853" FT /db_xref="UniProtKB/TrEMBL:Q5LGU9" FT /protein_id="CAH06638.1" FT /translation="MKIRKDDILLILLSLLFASCRVGKAEPVADPMEEEGISVVRYDKL FT LDEYVRFNSFSALQKMNLEYALPTKLLIEDVLAIGQVSDDHIFQRLKTFYSDTTLVRLI FT EDVEAKYPELESVEKNLTKGFGKLQKEIPDIMIPMIYTQISAFNESIVLSDSVLGISLD FT KYMGEDYPLYKRFYYNYQRRTMRPDRIVPDCLVFYLMSQYPFPMDYSRTLLDVMMHYGK FT INYVVQHLLDYSSSEEALGYSDLEREWCKENQQQMWRYILEQDHLHATDPMVVRQYTRP FT APFTNTLGENAPSMVGTWIGTKIITSYMKHHKKTTLRQLLEMSDYERMFTESRFNP" FT misc_feature 1123167..1123241 FT /note="Signal peptide predicted for BF0895 by SignalP 2.0 FT HMM (Signal peptide probability 0.994) with cleavage site FT probability 0.472 between residues 25 and 26" FT misc_feature 1123194..1123226 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 1124207..1124911 FT /transl_table=11 FT /locus_tag="BF9343_0858" FT /old_locus_tag="BF0896" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT S-adenosylmethionine-dependent methytransferase BT4190 FT SWALL:AAO79295 (EMBL:AE016944) (234 aa) fasta scores: E(): FT 3.8e-80, 87.6% id in 234 aa, and to Neisseria meningitidis FT hypothetical protein NMA0547 SWALL:Q9JW49 (EMBL:AL162753) FT (241 aa) fasta scores: E(): 1.4e-36, 46.38% id in 235 aa, FT and to Neisseria meningitidis hypothetical protein NMB1908 FT SWALL:Q9JXS3 (EMBL:AE002540) (241 aa) fasta scores: E(): FT 2.5e-36, 46.38% id in 235 aa. CDS overlaps 29 nt with FT adjacent CDS" FT /db_xref="GOA:Q5LGU8" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR008189" FT /db_xref="UniProtKB/TrEMBL:Q5LGU8" FT /protein_id="CAH06639.1" FT /translation="MDTALYLLPVTLGDTPIESVLPSYNKEIIQGIKHFIVEDVRSARR FT FLKKVDREIDIDSLTFYPLNKHTSPEDISGYLKPLAGGLSMGVISEAGCPAVADPGADV FT VAIAQRKNLKVVPLVGPSSIILSVMGSGFNGQSFAFHGYLPIEPGERAKKIKALEQRVY FT AEHQTQLFIETPYRNNKMVEDILHNCRPQTRLCIAANITCEGEYIRTKTIKEWQGKVPD FT LTKIPCIFLLYQ" FT CDS complement(1124877..1125995) FT /transl_table=11 FT /locus_tag="BF9343_0859" FT /old_locus_tag="BF0897" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4191 SWALL:AAO79296 (EMBL:AE016944) (373 aa) FT fasta scores: E(): 1.6e-113, 72.11% id in 373 aa, and FT C-terminus is similar to Bacteroides thetaiotaomicron FT putative NTP pyrophosphohydrolase BT3972 SWALL:AAO79077 FT (EMBL:AE016943) (180 aa) fasta scores: E(): 1.3e-07, 26.99% FT id in 163 aa. CDS overlaps 29 nt with adjacent CDS" FT /db_xref="GOA:Q5LGU7" FT /db_xref="InterPro:IPR000086" FT /db_xref="UniProtKB/TrEMBL:Q5LGU7" FT /protein_id="CAH06640.1" FT /translation="MGNKGVLSSAFNMSLGFIPVIVSILLCEFITQDISIYIGTGIGLI FT YSYRSLSRKGARIPNFILYISTGILTLLTLASFIPGDFVPEGALPLTLEVSILIPMVIL FT FLHRRKFISHYLRQNAQCNRRLFAQGAESAIVSARVVLILGILHFAVISLTVLVAHPLT FT RTSILVLYHVLPPTIFILSILLNQIGIRYFNHVMAHTEYVPIVNTRGDVIGKSLAVEAI FT NYKNAYINPVIRIAVSTHGMLFLCNRPQSCILDKGKVDIPMECYLRYGETLTAGANRLL FT SNAFPKASDLKPTFTISYHFENEQTNRLVYLFIVDMEDDSILCDPRFKGGKLWTFQQIE FT HNLGTHFFSECFELEYEHLKQVIGIREKYKVS" FT misc_feature complement(order(1125429..1125497,1125525..1125593, FT 1125675..1125728,1125756..1125824,1125885..1125953)) FT /note="5 probable transmembrane helices predicted for FT BF0897 by TMHMM2.0 at aa 15-37, 58-80, 90-107, 135-157 and FT 167-189" FT CDS complement(1126060..1126926) FT /transl_table=11 FT /locus_tag="BF9343_0860" FT /old_locus_tag="BF0898" FT /product="putative lipoic acid synthetase" FT /note="Similar to Leptospira interrogans lipoic acid FT synthetase La2292 SWALL:Q8F3V7 (EMBL:AE011399) (301 aa) FT fasta scores: E(): 5.9e-48, 45.74% id in 282 aa, and to FT Bacteroides thetaiotaomicron lipoic acid synthetase BT4192 FT SWALL:AAO79297 (EMBL:AE016944) (282 aa) fasta scores: E(): FT 1.1e-89, 83.87% id in 279 aa, and to Thermoanaerobacter FT tengcongensis lipoic acid synthetase LipA or TTE1672 FT SWALL:LIPA_THETN (SWALL:Q8R9E1) (284 aa) fasta scores: E(): FT 7.5e-53, 53.26% id in 276 aa" FT /db_xref="GOA:Q5LGU6" FT /db_xref="InterPro:IPR003698" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGU6" FT /protein_id="CAH06641.1" FT /translation="MGNDKRVRKPEWLKISIGANERYTETKRIVESHCLHTICSSGRCP FT NMGECWGKGTATFMIAGDICTRSCKFCNTQTGRPLPLDPDEPTHVAESIALMKLSHAVI FT TSVDRDDLPDLGAAHWAQTIREIKRLNPETTTEVLIPDFQGRKELVDQVIKACPEIISH FT NMETVKRISPQVRSAANYHTSLEVIRQIAESGITAKSGIMVGLGETPAEVEELMDDLIS FT VGCKILTIGQYLQPTHKHFPVAAYITPEQFAVYKETGLKKGFEQVESAPLVRSSYHAEK FT HIRFNNK" FT misc_feature complement(1126267..1126752) FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 65.2, E-value 1.2e-16" FT CDS complement(1127053..1129263) FT /transl_table=11 FT /locus_tag="BF9343_0861" FT /old_locus_tag="BF0899" FT /product="putative dipeptidyl peptidase" FT /note="Similar to Porphyromonas gingivalis dipeptidyl FT peptidase DPP IV SWALL:O66223 (EMBL:AB008194) (723 aa) FT fasta scores: E(): 1.6e-124, 51.01% id in 741 aa, and to FT Bacteroides thetaiotaomicron dipeptidyl peptidase IV BT4193 FT SWALL:AAO79298 (EMBL:AE016944) (736 aa) fasta scores: E(): FT 0, 80.57% id in 736 aa, and to Porphyromonas gingivalis FT dipeptidyl peptidase DPP IV SWALL:O31048 (EMBL:AF026511) FT (723 aa) fasta scores: E(): 1.8e-123, 50.47% id in 741 aa" FT /db_xref="GOA:Q5LGU5" FT /db_xref="InterPro:IPR001375" FT /db_xref="InterPro:IPR002469" FT /db_xref="InterPro:IPR002471" FT /db_xref="UniProtKB/TrEMBL:Q5LGU5" FT /protein_id="CAH06642.1" FT /translation="MKRKFIFLFFCLCCLAGFAQGGKALDLKEINSGKFSPENIYGVVP FT MPDGEHYTQRNAEGTQIVKYSFRTGEPVEVVFDVTKARECPFKKFDSYQFSPDGSKILI FT ATETKPIYRHSYTAVHYLYPVKRNDKGVTTNNIVEKLSDGGPQQAPVFSPDGNLVAFVR FT DNNIFLVKLLYGNSESQVTEDGKLNSVLNGIPDWVYEEEFGFNRALEFNADNTMLAYVR FT FDESEVPSYTFPLFAGEAPRYDALQDYPGEYTYKYPKAGYPNSKVSVHTFDIKSKVTRQ FT VKLPIDADGYIPRIRFTQDPNKLAIMTLNRHQNRFDMYFADPRSTVCKLALRDESPYYI FT NENVFDNIQFYPEYFSFVSDKSGYPHLYWYSMNGNLIKQVTSGNYEVKNFIGWNPDTNE FT FYYTSNEESPMRQAVYKIDRKGKKMKLSNQPGTNSPIFSSSMKYFMNKFTSLDTPMLIT FT LNDNTGKVLKTLVTNDKLKQKLAEYAIPQKEFFTFKTTEGVDLNGWMMKPVNFDPAKRY FT PVLMFQYSGPGSQQVLDKWGISWETYMASLGYVVACVDGRGTGGRGSEFQKCTYLNLGV FT KEAKDQVEAAKYLGGLPYVDKGRIGIWGWSFGGYMTIMSMSEGTPVFKAGVAVAAPTDW FT KYYDTVYTERFMRTPKENAEGYKAASAFSRADNLHGNLLLVHGMADDNVHFQNCTEYAE FT HLVQLGKQFDMQVYTNRNHSIYGGNTRNHLYTKLTNFFRNNL" FT misc_feature complement(1127431..1127523) FT /note="PS00708 Prolyl endopeptidase family serine active FT site." FT misc_feature complement(1127431..1127652) FT /note="Pfam match to entry PF00326 Peptidase_S9, Prolyl FT oligopeptidase family, score 60.7, E-value 2.7e-15" FT misc_feature complement(1127671..1129191) FT /note="Pfam match to entry PF00930 DPPIV_N_term, Dipeptidyl FT peptidase IV (DPP IV) N-terminal region, score 427.0, FT E-value 1.5e-125" FT misc_feature complement(1129198..1129251) FT /note="1 probable transmembrane helix predicted for BF0899 FT by TMHMM2.0 at aa 5-22" FT misc_feature complement(1129201..1129263) FT /note="Signal peptide predicted for BF0899 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.602 between residues 21 and 22" FT CDS 1129701..1130429 FT /transl_table=11 FT /locus_tag="BF9343_0862" FT /old_locus_tag="BF0901" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4117 SWALL:AAO79222 (EMBL:AE016943) FT (264 aa) fasta scores: E(): 2.2e-26, 48.28% id in 263 aa, FT and to Streptococcus pneumoniae hypothetical protein Sp1914 FT SWALL:Q97NU8 (EMBL:AE007482) (224 aa) fasta scores: E(): FT 4.7e-06, 24.24% id in 231 aa, and to Streptococcus FT pneumoniae hypothetical protein spr1730 SWALL:Q8CYB8 FT (EMBL:AE008538) (224 aa) fasta scores: E(): 8.6e-06, 24.24% FT id in 231 aa" FT /db_xref="GOA:Q5LGU4" FT /db_xref="InterPro:IPR024425" FT /db_xref="UniProtKB/TrEMBL:Q5LGU4" FT /protein_id="CAH06643.1" FT /translation="MEKKEFSSPARRYGKFFIAFIFITAGVLLLARNLGWISYTLFGIL FT VSWQMLLILLGIYLMLRRQILRGGILLAIGAYLISPYLGWMPAGIHVTLFPIVLIVIGL FT AFLFRPKRARHERSHRGNFASSQYNSTDGVLHSENTFSGIRQVVLDEVFKGGTIQNSFG FT GTVIDLRRTTLPEGETFLDIDCTFGGIEIYVPSDWKVVFRCTTCLGGCQDKRFGGGMID FT QNRILVIRGDLTFGGIDIKS" FT misc_feature order(1129737..1129805,1129815..1129883,1129902..1129955, FT 1129965..1130024) FT /note="4 probable transmembrane helices predicted for FT BF0901 by TMHMM2.0 at aa 13-35, 39-61, 68-85 and 89-108" FT CDS 1130439..1131281 FT /transl_table=11 FT /locus_tag="BF9343_0863" FT /old_locus_tag="BF0902" FT /product="putative transmembrane and transcriptional FT regulatory protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT two-component system response regulator, no kinase domain FT BT4118 SWALL:AAO79223 (EMBL:AE016943) (270 aa) fasta FT scores: E(): 4.3e-32, 54.77% id in 283 aa, and of FT Streptococcus agalactiae response regulator sag1016 FT SWALL:Q8DZT1 (EMBL:AE014238) (244 aa) fasta scores: E(): FT 1.7e-05, 35.92% id in 103 aa, and C-terminus is similar to FT the C-terminus of Streptococcus agalactiae Gbs1051 protein FT SWALL:Q8E5H8 (EMBL:AL766848) (244 aa) fasta scores: E(): FT 1.7e-05, 35.92% id in 103 aa" FT /db_xref="GOA:Q5LGU3" FT /db_xref="InterPro:IPR007492" FT /db_xref="UniProtKB/TrEMBL:Q5LGU3" FT /protein_id="CAH06644.1" FT /translation="MDIHPIQESSRRWMTALILAVVAAGIQTTLLWGYAGADTLPAAID FT GILSVGLLCLLAYLAWYVIGLVSILQTDLLIAALALLFWLAGGFAVQYVLEQNMGQVYA FT PFGETLPFRILFGALAWGVMMLWYRLQSLNTVQEEILEEAVSREEALREELRQIECRED FT KALPEEAECIDRITVKDGTHIHLIRTDELLYIQACGDYVTLVTPSGQYVKEQTMKYFDA FT HLPSAGFVRVHRSTIVNVTQISRVELFGKENYQLSLKNGVRLKVSNSGYKLLKERLEL" FT misc_feature 1130439..1130549 FT /note="Signal peptide predicted for BF0902 by SignalP 2.0 FT HMM (Signal peptide probability 0.782) with cleavage site FT probability 0.696 between residues 37 and 38" FT misc_feature order(1130475..1130543,1130571..1130639,1130658..1130726, FT 1130769..1130828) FT /note="4 probable transmembrane helices predicted for FT BF0902 by TMHMM2.0 at aa 13-35, 45-67, 74-96 and 111-130" FT misc_feature 1130961..1131275 FT /note="Pfam match to entry PF04397 LytTR, LytTr DNA-binding FT domain, score 98.4, E-value 1.2e-26" FT CDS 1131615..1132550 FT /transl_table=11 FT /locus_tag="BF9343_0864" FT /old_locus_tag="BF0903" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4125 SWALL:AAO79230 (EMBL:AE016943) FT (324 aa) fasta scores: E(): 4.8e-102, 83.38% id in 301 aa, FT and to Clostridium tetani fe-s oxidoreductase CTC00179 FT SWALL:AAO34830 (EMBL:AE015936) (314 aa) fasta scores: E(): FT 4.5e-43, 41.33% id in 300 aa, and to Bacillus subtilis FT hypothetical protein YtqA SWALL:O35008 (EMBL:AF008220) (322 FT aa) fasta scores: E(): 3.6e-42, 39% id in 300 aa" FT /db_xref="GOA:Q5LGU2" FT /db_xref="InterPro:IPR005911" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q5LGU2" FT /protein_id="CAH06645.1" FT /translation="MTKPAPTPLYNEFTFFLKKYFSYKVQKISLNAGFTCPNRDGTKGL FT GGCTYCNNQTFNPEYCKTEKSVTRQLEEGKQFFAHKYPDMKYLAYFQAYTNTYAELEGL FT KGKYEEALSVDGVVGLVIGTRPDCMPDPLLRYLEELNKHTFLLVEYGIETTRDVTLKRI FT NRGHTYADTVETVNRTAACGILTGGHVILGLPGETHDEIIAQAAELSRLPLTTLKMHQL FT QLIRGTKMAREFECRPEDFHLFSVDEYIDLVIDYVEHLRPDLILERFVSQSPKELLIAP FT DWGLKNYEFTARVQKRMKERGAYQGKAYLV" FT misc_feature 1131702..1132241 FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 41.5, E-value 1.7e-09" FT CDS 1132669..1133868 FT /transl_table=11 FT /locus_tag="BF9343_0865" FT /old_locus_tag="BF0904" FT /product="putative flavoprotein" FT /note="Similar to Escherichia coli anaerobic nitric oxide FT reductase flavorubredoxin NorV or FlrD or B2710 FT SWALL:NORV_ECOLI (SWALL:Q46877) (479 aa) fasta scores: E(): FT 1.2e-34, 32.22% id in 391 aa, and to Bacteroides FT thetaiotaomicron flavoprotein BT4126 SWALL:AAO79231 FT (EMBL:AE016943) (398 aa) fasta scores: E(): 1.4e-147, 91.7% FT id in 398 aa, and to Fusobacterium nucleatum flavoprotein FT FN0512 SWALL:Q8RG10 (EMBL:AE010563) (403 aa) fasta scores: FT E(): 4e-66, 45.22% id in 398 aa" FT /db_xref="GOA:Q5LGU1" FT /db_xref="InterPro:IPR001279" FT /db_xref="InterPro:IPR008254" FT /db_xref="InterPro:IPR016440" FT /db_xref="UniProtKB/TrEMBL:Q5LGU1" FT /protein_id="CAH06646.1" FT /translation="MEQKTRIKGNVHYVGVNDRNKHLFEGMWPLPYGVSYNSYLIDDEM FT VALIDTVDICYFEVYLRKIRNIIGDRPINYLIINHMEPDHSGSIRLIKQHYPDIVIVGN FT KQTFGMIEGFYGVTGEQYLIKDGDFLALGRHKLRFYLTPMVHWPETMMTFDETDGILFS FT GDGFGCFGTLDGGFVDTRMNIDHYWGEMVRYYSNIVGKYGSPVQKALQKLGGLPISAIC FT STHGPVWTENITKVVGIYDKLSRYDADEGVVIAYGSMYGNTEQMAEAIAAELSAQGIKN FT IVMHNVSKSNPSYILADIFRYKGLIIGSPTYSNQIFPEVESLLSKILVRELKGRYLGYF FT GSFTWAGAAVKRMAEFAEKSKFELVGDPVEMKQAMKEITYQQCENLARAMAGRLKKDRV FT " FT misc_feature 1132771..1133343 FT /note="Pfam match to entry PF00753 lactamase_B, FT Metallo-beta-lactamase superfamily, score 74.2, E-value FT 2.3e-19" FT misc_feature 1133419..1133853 FT /note="Pfam match to entry PF00258 flavodoxin, Flavodoxin, FT score 50.2, E-value 4e-12" FT CDS 1133908..1134720 FT /transl_table=11 FT /gene="nagB" FT /gene_synonym="glmD" FT /locus_tag="BF9343_0866" FT /old_locus_tag="BF0905" FT /product="putative glucosamine-6-phosphate deaminase" FT /EC_number="3.5.99.6" FT /note="Similar to Escherichia coli, and Escherichia coli FT O157:H7 glucosamine-6-phosphate deaminase NagB or GlmD or FT b0678 or Z0825 or ECS0708 SWALL:NAGB_ECOLI (SWALL:P09375) FT (266 aa) fasta scores: E(): 1.6e-66, 64.63% id in 263 aa, FT and to Bacteroides thetaiotaomicron glucosamine-6-phosphate FT deaminase NagB or BT4127 SWALL:AAO79232 (EMBL:AE016943) FT (270 aa) fasta scores: E(): 9.9e-104, 96.29% id in 270 aa, FT and to Borrelia burgdorferi glucosamine-6-phosphate FT deaminase NagB or BB0152 SWALL:NAGB_BORBU (SWALL:O30564) FT (268 aa) fasta scores: E(): 8.4e-74, 69.31% id in 264 aa" FT /db_xref="GOA:Q5LGU0" FT /db_xref="HSSP:1JT9" FT /db_xref="InterPro:IPR004547" FT /db_xref="InterPro:IPR006148" FT /db_xref="InterPro:IPR018321" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGU0" FT /protein_id="CAH06647.1" FT /translation="MRLIIQPDYQSVSQWAAHYVAAKIKAANPTPEKPFVLGCPTGSSP FT LGMYKALIDLNKKGIVSFQNVVTFNMDEYVGLPKEHPESYYSFMWNNFFSHIDIKPENT FT NILNGNAADLDAECARYEEKIKSYGGIDLFMGGIGPDGHIAFNEPGSSLSSRTRQKTLT FT TDTIIANSRFFDNDINKVPKTSLTVGVGTVLSAREVMIIVNGHNKARALYHAVEGAITQ FT MWTISALQMHEKGIIVCDDAATAELKVGTYRYFKDIEADHLDPQSLLK" FT misc_feature 1133950..1134657 FT /note="Pfam match to entry PF01182 Glucosamine_iso, FT Glucosamine-6-phosphate FT isomerases/6-phosphogluconolactonase, score 503.1, E-value FT 1.8e-148" FT misc_feature 1134280..1134336 FT /note="PS01161 Glucosamine/galactosamine-6-phosphate FT isomerases signature." FT CDS complement(1134814..1135239) FT /transl_table=11 FT /locus_tag="BF9343_0867" FT /old_locus_tag="BF0906" FT /product="hypothetical protein" FT /note="No significant database matches" FT /db_xref="GOA:Q5LGT9" FT /db_xref="InterPro:IPR013829" FT /db_xref="UniProtKB/TrEMBL:Q5LGT9" FT /protein_id="CAH06648.1" FT /translation="MKKVLFFALVLTIATACSQTKDSYLEGFKLFIESVQKNAQDYTKA FT DWEKADEQFTKLKDSYNNFSKQMTSDEKGEVIKLESTYAALKLKKIGDDMKESTKDAFE FT KVKDTAKDAAKDVKEGAQKAAKKGEKAMEGIKDGLKD" FT misc_feature complement(1135189..1135221) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature complement(1135192..1135239) FT /note="Signal peptide predicted for BF0906 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.623 between residues 16 and 17" FT CDS complement(1135303..1135917) FT /transl_table=11 FT /locus_tag="BF9343_0868" FT /old_locus_tag="BF0907" FT /product="putative Sua5/yciO/yrdC family protein" FT /note="Similar to Streptomyces coelicolor ORF1, ORF2, ORF3, FT ORF4, ORF5 genes SWALL:Q9S5E4 (EMBL:AB017438) (200 aa) FT fasta scores: E(): 1e-20, 33.33% id in 198 aa, and to FT Bacteroides thetaiotaomicron conserved hypothetical protein FT BT4128 SWALL:AAO79233 (EMBL:AE016943) (204 aa) fasta FT scores: E(): 1.2e-69, 89.6% id in 202 aa, and to Vibrio FT parahaemolyticus putative translation factor vp1953 FT SWALL:BAC60216 (EMBL:AP005079) (206 aa) fasta scores: E(): FT 4.1e-28, 42% id in 200 aa" FT /db_xref="InterPro:IPR004388" FT /db_xref="InterPro:IPR006070" FT /db_xref="InterPro:IPR017945" FT /db_xref="UniProtKB/TrEMBL:Q5LGT8" FT /protein_id="CAH06649.1" FT /translation="MILKLYEKNNNPQDLQRIVDLLNDGGLIIYPTDTMYAIGCHGLKE FT RAIERICRIKEIDPKKNNLSIICYDLSSISEYAKVDNNIFKLMKRNLPGPFTFILNGTN FT RLPKIFRNRKEVGIRMPDNSIIREIARLLDAPIMTTTLPHDEHEDIEYVTDPELIDEKL FT GDVVDLVIDGGIGGIEPSTVVNCTEGEAAIVRQGKGELEEA" FT misc_feature complement(1135327..1135863) FT /note="Pfam match to entry PF01300 Sua5_yciO_yrdC, YrdC FT domain, score 125.3, E-value 9.4e-35" FT misc_feature complement(1135801..1135839) FT /note="PS01147 SUA5/yciO/yrdC family signature." FT CDS complement(1135965..1138478) FT /transl_table=11 FT /locus_tag="BF9343_0869" FT /old_locus_tag="BF0908" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron outer FT membrane assembly protein BT4129 SWALL:AAO79234 FT (EMBL:AE016943) (838 aa) fasta scores: E(): 0, 77.38% id in FT 840 aa, and to Escherichia coli O157:H7 suppressor of OmpF FT assembly mutants AsmA or Z3232 or ECS2871 SWALL:Q8X7L5 FT (EMBL:AE005432) (617 aa) fasta scores: E(): 0.0065, 23.93% FT id in 468 aa, and to Escherichia coli protein AsmA FT precursor or B2064 SWALL:ASMA_ECOLI (SWALL:P28249) (617 aa) FT fasta scores: E(): 0.0065, 23.93% id in 468 aa" FT /db_xref="InterPro:IPR007844" FT /db_xref="UniProtKB/TrEMBL:Q5LGT7" FT /protein_id="CAH06650.1" FT /translation="MKKGFKITAIVIGVILILMFLLPFAFRGKIEGIVKSEGNKMLNGH FT FDFSSLDISLFRNFPKASVTLNDFWLKGTGEFENDTLVKAGEVTAAINLFSLFGDDGYD FT VSKVAVENTRLHAIVLPDGKTNWDIMKPDSSTAGETQESGESSTFRIKLQRFVIKNMNV FT VYDDRQSAMYADIHNFNALCSGDLGSDQTLLSLEAETEALTYKMNGIPFLSQANVYAKM FT DVDADLAHNKFTLKKNEFRLNAIKAGIDGWIELKDPAIDMDLKLNTSEIGFKEILSLIP FT AIYSKEFKNLKTDGTATLEATAKGILQGDTVPQFDVRLAVKNAMFRYPSLPAGVDQINI FT DAQVRNPGGNIDLTEISIHPFSFRLAENPFSLTADIKTPVSDPDFTAEAKGVLNLGMIK FT QVYPLDDMELNGTVRADMTMAGHLSYIEKEQYDRFSASGTIALSDMKLKMKEMPDVEIK FT KSLFTFTPKYLQLSETTVAIGKNDLTADCRFENYMGYALKGSTLKGVLNVRSNHLNLND FT FMTATTDSTAQTSQASSTEETASMIEVPQNIDFQMDAGLKEVLFDKMTFTNMNGKLIVK FT DGKVDMTNLSMNTMGGSVVMNGYYSTADPKKPEMNTGFRMENIGFAQAYKELDMVQQMA FT PIFENLKGNFSGNMHIRTLLDNQMSPVMDTMQGNGSLSTQDLSLSGVKVIDQIAEAVKK FT PELKEMKVKDMALDFTIKDGRVSTKPFDIKLGDYVMNLSGSTGLDQTIDYSGKIKLPAS FT AGDIAKLTTLDLKIGGTFSSPKVSLDTKSMTNQAVEAVTDKAISEIGKKLGLDSATTAN FT KDSVKEKVKEKAVEKALDFLKKKIK" FT misc_feature complement(1138398..1138478) FT /note="Signal peptide predicted for BF0908 by SignalP 2.0 FT HMM (Signal peptide probability 0.939) with cleavage site FT probability 0.480 between residues 27 and 28" FT misc_feature complement(1138401..1138460) FT /note="1 probable transmembrane helix predicted for BF0908 FT by TMHMM2.0 at aa 7-26" FT CDS complement(1138716..1140716) FT /transl_table=11 FT /locus_tag="BF9343_0870" FT /old_locus_tag="BF0909" FT /product="putative helicase protein" FT /note="Similar to Lymantria dispar multicapsid nuclear FT polyhedrosis virus Ld-helicase-2 SWALL:Q9YMS4 FT (EMBL:AF081810) (460 aa) fasta scores: E(): 2e-11, 28.94% FT id in 418 aa, and to Bacteroides thetaiotaomicron putative FT helicase BT4130 SWALL:AAO79235 (EMBL:AE016943) (665 aa) FT fasta scores: E(): 1e-213, 83.25% id in 663 aa, and to FT Bacteroides thetaiotaomicron DNA repair and recombination FT protein, putative helicase BT0721 SWALL:AAO75828 FT (EMBL:AE016928) (848 aa) fasta scores: E(): 3.1e-68, 40.33% FT id in 605 aa" FT /db_xref="GOA:Q5LGT6" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003840" FT /db_xref="InterPro:IPR010285" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:Q5LGT6" FT /protein_id="CAH06651.1" FT /translation="MEFTIDTGNKEFQDALNLIQYTRQSVFLTGKAGTGKSTFLKYICK FT NTKKKHIVLAPTGIAAINAGGSTLHSFFKLPFHPLLPDDPNLSLQRGRIHEFFKYTKPH FT RKLLEQVELVIIDEISMVRADMIDAVDRILRVYSRNLRDPFGGKQVLLVGDVFQLEPVI FT KGDEREIINRFYPTPYFFSARVFNEIELVSIELQKVYRQSDAVFVSVLDHIRSGAAGAA FT DLQLLNTRYGAQIDASEEDLYITLATRRDTVETINERKLTELPGDPVVFEGEINGDFPE FT SSLPTSKELTLKPGAQIIFIKNDFERRWVNGTIGVVSGIDNDGIIYVITDDGKECDVHR FT ESWRNIRYKYNEEKKEIEEEELGTFTQYPIRLAWAITVHKSQGLTFSRVVIDFTGGVFA FT GGQAYVALSRCTSLEGIQLKKPISRADIFVRPEIVSFSGRFNNRQAIDKALKQAQADVQ FT YAAAARAFDKGDFETCLEQFFLAIHSRYDIEKPAARRLIRRKLGVVNLLREQKRKLQAQ FT MEAQKKSLQKYAREYLLMGNECITQAHDVRAALANYDKAIELYPEYIDAWIRKGITLFN FT EKEFFDAENCLNRAVSLRPSEFKALYNRGKLRLQTENIEGALSDLDKATSLKPEHPGAH FT ELFGDALLKVGKETEAAIQWRIAEELRKKKK" FT misc_feature complement(1138824..1138925) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 27.3, E-value 3.1e-05" FT misc_feature complement(1138926..1139027) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 21.8, E-value 0.0013" FT misc_feature complement(1139028..1139132) FT /note="Pfam match to entry PF00515 TPR, TPR Domain, score FT 12.5, E-value 0.18" FT misc_feature complement(1140498..1140566) FT /note="1 probable transmembrane helix predicted for BF0909 FT by TMHMM2.0 at aa 51-73" FT misc_feature complement(1140606..1140629) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(1140718..1141503) FT /transl_table=11 FT /locus_tag="BF9343_0871" FT /old_locus_tag="BF0910" FT /product="putative haloacid dehalogenase-like hydrolase" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4131 SWALL:AAO79236 (EMBL:AE016943) FT (261 aa) fasta scores: E(): 8.2e-70, 69.34% id in 261 aa, FT and to Bifidobacterium longum possible HAD-type hydrolase FT bl0958 SWALL:Q8G5P6 (EMBL:AE014718) (273 aa) fasta scores: FT E(): 7.2e-30, 38.25% id in 264 aa, and to Bacteroides FT thetaiotaomicron hydrolase, haloacid dehalogenase-like FT hydrolase BT1666 SWALL:AAO76773 (EMBL:AE016932) (258 aa) FT fasta scores: E(): 1.2e-28, 38.4% id in 263 aa" FT /db_xref="GOA:Q5LGT5" FT /db_xref="InterPro:IPR000150" FT /db_xref="InterPro:IPR006379" FT /db_xref="InterPro:IPR013200" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:Q5LGT5" FT /protein_id="CAH06652.1" FT /translation="MIKALFFDIDGTLVSFNTHEIPSSTLAAIAEAKAKGIKIFIATGR FT PKAIINNLTALQERELIDGYITMNGGYCFVEDEVIYKHSIPVQDVKALAALSDERNFPC FT IFVAEHTVAVCNTNKLVNEIFHDFLHVDILPIQTTAEATQAEIFQMTPFITTEEEKTVL FT PLLPNCESGRWFPAFTDIVAKGIRKQKGIDEIIRHFGIGQEETMAFGDGGNDISMLRHA FT AIGVAMGNANDDVKETADYITTSVDEDGIQKALKHFGII" FT misc_feature complement(1140808..1141500) FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 55.2, E-value 1.2e-13" FT misc_feature complement(1140811..1140879) FT /note="PS01229 Hypothetical cof family signature 2." FT misc_feature complement(1141459..1141494) FT /note="PS01228 Hypothetical cof family signature 1." FT CDS 1141675..1142859 FT /transl_table=11 FT /locus_tag="BF9343_0872" FT /old_locus_tag="BF0911" FT /product="putative aminotransferase" FT /note="Similar to Bacillus subtilis putative FT aminotransferase B PatB SWALL:PATB_BACSU (SWALL:Q08432) FT (387 aa) fasta scores: E(): 4.2e-67, 43.49% id in 384 aa, FT and to Bacteroides thetaiotaomicron putative FT aminotransferase BT4138 SWALL:AAO79243 (EMBL:AE016943) (389 FT aa) fasta scores: E(): 2.9e-129, 77.14% id in 385 aa, and FT to Yersinia pestis putative aminotransferase YPO3006 FT SWALL:Q8ZCI3 (EMBL:AJ414154) (393 aa) fasta scores: E(): FT 3.4e-71, 44.61% id in 390 aa" FT /db_xref="GOA:Q5LGT4" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q5LGT4" FT /protein_id="CAH06653.1" FT /translation="MKYNFDEVIERRGTDSVKYDAVSERWGRSDLLPMWVADMDFRTPP FT FVIEAIRRRLDHEVLGYTFACEAWYTSIINWQKERHGWNVTREMLTFTPGIVRGLAFAL FT QCFTAPGDKVMVMPPVYHPFFLVTEHNHREVVYSPLLLKDGQYQIDFERFRADVKGCKM FT LILSNPHNPGGRVWTREELAEIAEICFDNQVLVISDEIHADLTLPGYTHPTFALVSEKA FT RRNSLVFMSPSKAFNMPGLASSYCIIEDEAIRHRFQTYMEASEFSEGHLFAYLGVAAAY FT SNGTEWLDQALEYIQENIDFTDEYLKTHIPAIRMIRPQASYLIFLDCRGMGVSQKELVD FT FFVDGAHLALNDGAMFGKEGEGFMRLNVACPRSVLRQALDQIKEAYELKHDTIA" FT misc_feature 1141915..1142832 FT /note="Pfam match to entry PF00155 aminotran_1_2, FT Aminotransferase class I and II, score 37.5, E-value FT 1.1e-08" FT CDS 1142891..1144126 FT /transl_table=11 FT /locus_tag="BF9343_0873" FT /old_locus_tag="BF0912" FT /product="putative O-acetylhomoserine synthase" FT /note="Similar to Schizosaccharomyces pombe FT O-acetylhomoserine spbc428.11 SWALL:CYSD_SCHPO FT (SWALL:O13326) (429 aa) fasta scores: E(): 7.6e-27, 33.56% FT id in 429 aa, and to Clostridium acetobutylicum FT O-acetylhomoserine sulfhydrylase Cac0102 SWALL:Q97MT9 FT (EMBL:AE007523) (409 aa) fasta scores: E(): 3.2e-45, 32.59% FT id in 408 aa, and to Deinococcus radiodurans FT O-acetylhomoserine dr2186 SWALL:Q9RSD8 (EMBL:AE002051) (418 FT aa) fasta scores: E(): 7.6e-36, 33.75% id in 394 aa" FT /db_xref="GOA:Q5LGT3" FT /db_xref="InterPro:IPR000277" FT /db_xref="InterPro:IPR006235" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:Q5LGT3" FT /protein_id="CAH06654.1" FT /translation="MKKNSFETQILHTPFEKEDAYHSLSMPVYHTAAYEFETAEEMEAA FT FCGQKAGHAYSRITNPTVQYFEQRVQRVTGALSVTALNSGMAAISNALITLASAGANVV FT TSTHLFGNTYSFLKSTLEAFGVEVRFCDLTCPEEVKQQIDGDTCALFLEVITNPQLEVA FT DLKALADIAHKAGVPLLADTTAIPFHVFHATDFGVDIEIVSSTKYISGGATCIGGLIID FT YGTFDWEHSAKLAALSADTGKEAFTVKLRKEVHRNLGAYMTPQVAYMQTLGLETMEVRF FT ARQAETCLKLAQCLQELPEIESVNYTGLESNPFYELSTRQFGSLPGAMLTFDLPSRKIC FT FRFINRLRIIRRATNLFDNKTLAIHPASTIYGSFTEDQRRGMDVSQKTIRLSVGLERAD FT DLLDDIIQALKS" FT misc_feature 1142909..1144120 FT /note="Pfam match to entry PF01053 Cys_Met_Meta_PP, Cys/Met FT metabolism PLP-dependent enzyme, score 303.8, E-value FT 1.7e-88" FT CDS 1144152..1144733 FT /transl_table=11 FT /locus_tag="BF9343_0874" FT /old_locus_tag="BF0913" FT /product="putative RNA polymerase ECF-type sigma factor" FT /note="Similar to Bordetella avium RNA polymerase ECF-type FT sigma factor RhuI SWALL:Q8L1U9 (EMBL:AY095952) (168 aa) FT fasta scores: E(): 0.0019, 26.82% id in 164 aa, and to FT Bacteroides thetaiotaomicron RNA polymerase ECF-type sigma FT factor BT4636 SWALL:AAO79741 (EMBL:AE016946) (197 aa) fasta FT scores: E(): 3.3e-12, 31.97% id in 172 aa, and to FT Bacteroides thetaiotaomicron ECF-type sigma factor BT0978 FT SWALL:AAO76085 (EMBL:AE016929) (163 aa) fasta scores: E(): FT 9.6e-11, 32.48% id in 157 aa, and to Bacteroides FT thetaiotaomicron RNA polymerase ECF-type sigma factor FT BT3517 SWALL:AAO78623 (EMBL:AE016941) (190 aa) fasta FT scores: E(): 3.5e-08, 28.73% id in 174 aa" FT /db_xref="GOA:Q5LGT2" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:Q5LGT2" FT /protein_id="CAH06655.1" FT /translation="MLPKKKNLEEERAKHTVDSLYKDYVDDLFSYALGFGFDKQTAMDA FT IHDVFCRVCIREREVQEIQNPKFYLLRALRNQLIDTYKLKRNYSEVLTGEITDELPYKI FT KITVEDEIIAAEEQAEVSQKVDEILSILTERQREIIYLRYMQECSYEEIAEIMQISVPA FT CRKLLYRTLLKLKHNNTLVLFYLLLSINVG" FT misc_feature 1144209..1144415 FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 24.9, E-value 0.00016" FT misc_feature 1144533..1144682 FT /note="Pfam match to entry PF04545 sigma70_r4, Sigma-70, FT region 4, score 60.2, E-value 3.8e-15" FT misc_feature 1144593..1144658 FT /note="Predicted helix-turn-helix motif with score FT 1392.000, SD 3.93 at aa 148-169, sequence FT CSYEEIAEIMQISVPACRKLLY" FT CDS 1144843..1145949 FT /transl_table=11 FT /locus_tag="BF9343_0875" FT /old_locus_tag="BF0914" FT /product="putative anti-sigma factor" FT /note="Similar to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrF SWALL:Q8VTB0 FT (EMBL:AF329100) (336 aa) fasta scores: E(): 3.6e-14, 29.83% FT id in 238 aa, and to Bacteroides thetaiotaomicron putative FT anti-sigma factor BT3518 SWALL:AAO78624 (EMBL:AE016941) FT (400 aa) fasta scores: E(): 1.7e-22, 30.55% id in 288 aa, FT and to Bacteroides thetaiotaomicron putative anti-sigma FT factor BT3270 SWALL:AAO78376 (EMBL:AE016939) (402 aa) fasta FT scores: E(): 2e-21, 28.91% id in 370 aa" FT /db_xref="InterPro:IPR006860" FT /db_xref="InterPro:IPR012373" FT /db_xref="UniProtKB/TrEMBL:Q5LGT1" FT /protein_id="CAH06656.1" FT /translation="MEKTKRDSRHIDPLKDEEKFFQWLKFKSVRMNQEHLSKDDYERLR FT QRIHVSLRMLRRKRTVRRVAYYGVSVCVIIALGIVAYLNHYERVEPVPSVVEKKAEIVW FT QPLKSEDIRLVSGDSITSFRQNVQLLLSKDGSAMVYHPNSGQKRIRMEQDEVNELVVPY FT GKRSKVKLEDGTEIWLNSGSVFKFPTHFSGEKREVSLKGEMYAEVTADSKKPFIVHTAH FT FDIQVYGTRFNISAYEDEPTPSCVLVDGIVGFRPESGPEIRMKTNEKVLYDGKRFEKRK FT VSASRYTCWKEGYLELDDANIMDVLNRIGRYYNLSFSFGDKKRLTGRKCSGKIYLSDNI FT DNVLTTISLLYSTDYRKEERTIFISENP" FT misc_feature 1145032..1145100 FT /note="1 probable transmembrane helix predicted for BF0914 FT by TMHMM2.0 at aa 64-86" FT misc_feature 1145332..1145562 FT /note="Pfam match to entry PF04773 FecR, FecR protein, FT score 25.1, E-value 3.1e-07" FT CDS 1146141..1146575 FT /transl_table=11 FT /locus_tag="BF9343_0876" FT /old_locus_tag="BF0915" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT3750 SWALL:AAO78855 (EMBL:AE016942) (866 aa) FT fasta scores: E(): 0.019, 29.24% id in 106 aa" FT /db_xref="GOA:Q5LGT0" FT /db_xref="InterPro:IPR011662" FT /db_xref="UniProtKB/TrEMBL:Q5LGT0" FT /protein_id="CAH06657.1" FT /translation="MKRERIVRTENIDRQRIKYRVLFGFIFIMCCNGAALPSEDGKMPD FT WKFSFSLKRIPMIRIFDEIEQKSDFVFAWSCDIDNEIHEEISICVTEEPIQKVMEKVLK FT GSGLVYQRLDRQIVVYRLLGHNACRVDSVRVMTNMEQNDR" FT misc_feature 1146201..1146254 FT /note="1 probable transmembrane helix predicted for BF0915 FT by TMHMM2.0 at aa 21-38" FT CDS complement(1146588..1147271) FT /transl_table=11 FT /locus_tag="BF9343_0877" FT /old_locus_tag="BF0916" FT /product="putative FNR-like protein" FT /note="Similar to Lactococcus lactis FNR-like protein FT SWALL:Q9S392 (EMBL:AJ006750) (229 aa) fasta scores: E(): FT 0.013, 24.29% id in 214 aa, and to Bacteroides FT thetaiotaomicron transcription regulator, CRP family BT4300 FT SWALL:Q89ZS6 (EMBL:AE016944) (220 aa) fasta scores: E(): FT 1.9e-54, 68.98% id in 216 aa, and to Bacteroides FT thetaiotaomicron cAMP-binding domain BT0688 SWALL:Q8A9X7 FT (EMBL:AE016928) (222 aa) fasta scores: E(): 5.8e-13, 28.88% FT id in 225 aa" FT /db_xref="GOA:Q5LGS9" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018488" FT /db_xref="InterPro:IPR018490" FT /db_xref="UniProtKB/TrEMBL:Q5LGS9" FT /protein_id="CAH06658.1" FT /translation="METMFDTLLQLPLFQGLCHEDFTNILEKVKLHFTRHKPGEPLIKS FT GEVCDQLLFLLKGRLSSVTVSEDDTLTVIEYFEAPAVLEPYSMFGMNTRYISSYIPHNE FT EAQMVSISKSFVMGELFKYDIFRLNYMNIVSNRAQNLYTRLWDKAPKDIEDKIIRFILG FT HIERMTGEKLFKVKMDDLARMLDDTRLNVSKALNGLQELNLLELHRKEIRIPDLSLLTE FT WNEKR" FT misc_feature complement(1146681..1146746) FT /note="Predicted helix-turn-helix motif with score 983.000, FT SD 2.53 at aa 196-217, sequence VKMDDLARMLDDTRLNVSKALN" FT misc_feature complement(1147068..1147184) FT /note="Pfam match to entry PF00027 cNMP_binding, Cyclic FT nucleotide-binding domain, score 18.9, E-value 1.3e-05" FT misc_feature complement(1147098..1147148) FT /note="PS00888 Cyclic nucleotide-binding domain signature FT 1." FT CDS 1147447..1148043 FT /transl_table=11 FT /locus_tag="BF9343_0878" FT /old_locus_tag="BF0917" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein, putative membrane protein BT4301 FT SWALL:AAO79406 (EMBL:AE016944) (199 aa) fasta scores: E(): FT 3e-70, 94.44% id in 198 aa, and to Anabaena sp. FT hypothetical protein ALL2000 SWALL:Q8YVH8 (EMBL:AP003587) FT (197 aa) fasta scores: E(): 7.9e-13, 26.42% id in 193 aa, FT and to Yersinia pestis putative membrane protein YPO3950 or FT Y3879 SWALL:Q8ZA68 (EMBL:AJ414159) (194 aa) fasta scores: FT E(): 2.6e-12, 26.94% id in 193 aa" FT /db_xref="GOA:Q5LGS8" FT /db_xref="InterPro:IPR002771" FT /db_xref="UniProtKB/TrEMBL:Q5LGS8" FT /protein_id="CAH06659.1" FT /translation="MFANFNFQQMVSAFIVLFAVIDIIGSIPIIINLKEKGKDVNATKA FT TVISFALMIGFFYAGDFMLKLFHVDIESFAVAGAFVIFLMSLEMILDVEIFKNQGPIKE FT ATLVPLVFPLLAGAGAFTTLLSLRAEYASINIVIALILNMLWVYFVVSMTGRVERFLGK FT GGIYIIRKFFGIILLAISVRLFTANITLLIAALQK" FT misc_feature 1147465..1148025 FT /note="Pfam match to entry PF01914 MarC, MarC family FT integral membrane protein, score 77.6, E-value 2.2e-20" FT misc_feature order(1147474..1147542,1147579..1147638,1147666..1147734, FT 1147759..1147827,1147840..1147899,1147960..1148028) FT /note="6 probable transmembrane helices predicted for FT BF0917 by TMHMM2.0 at aa 10-32, 45-64, 74-96, 105-127, FT 132-151 and 172-194" FT CDS complement(1148081..1148758) FT /transl_table=11 FT /locus_tag="BF9343_0879" FT /old_locus_tag="BF0918" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4302 SWALL:AAO79407 (EMBL:AE016944) FT (221 aa) fasta scores: E(): 1.3e-61, 66.51% id in 218 aa, FT and to Xanthomonas axonopodis hypothetical protein Xac4366 FT SWALL:Q8PEI3 (EMBL:AE012091) (289 aa) fasta scores: E(): FT 9.5e-18, 34.35% id in 195 aa, and to Xanthomonas campestris FT hypothetical protein Xcc4233 SWALL:Q8P345 (EMBL:AE012551) FT (382 aa) fasta scores: E(): 1.2e-17, 35.32% id in 201 aa" FT /db_xref="GOA:Q5LGS7" FT /db_xref="InterPro:IPR022764" FT /db_xref="UniProtKB/TrEMBL:Q5LGS7" FT /protein_id="CAH06660.1" FT /translation="MRPEIRQILLTMVLPLFLIFILYMIKVLEIGMDWDFTSLGVYPLS FT KKGMFGIFTHPLIHSSFKHLLTNTLPLFFLSWCLFYFYRSIAPSIFLIIWIGCGAITFL FT IGKPAWHIGASGIIYGLAFFLFFSGLLRKYIPLIAISLLVTFLYGGLIWNMLPYFTPSG FT ISWEGHLSGAIIGTICAFSFMGYGPQKPDPFANEQEEESVSATDETDNIEMDKEEEHEI FT DAE" FT misc_feature complement(1148195..1148632) FT /note="Pfam match to entry PF01694 Rhomboid, Rhomboid FT family, score 47.1, E-value 3.4e-11" FT misc_feature complement(order(1148198..1148251,1148279..1148347, FT 1148366..1148434,1148444..1148503,1148522..1148590, FT 1148666..1148734)) FT /note="6 probable transmembrane helices predicted for FT BF0918 by TMHMM2.0 at aa 9-31, 57-79, 86-105, 109-131, FT 138-160 and 170-187" FT CDS 1148929..1150869 FT /transl_table=11 FT /locus_tag="BF9343_0880" FT /old_locus_tag="BF0919" FT /product="conserved hypothetical protein" FT /note="Similar to Synechococcus sp. glycosyltransferase FT MalQ Sec0007 SWALL:Q8KPV1 (EMBL:AY120852) (681 aa) fasta FT scores: E(): 1.5e-26, 30.25% id in 671 aa, and to FT Bacteroides thetaiotaomicron glycogen debranching FT enzyme-related protein BT4303 SWALL:AAO79408 FT (EMBL:AE016944) (645 aa) fasta scores: E(): 0, 90.06% id in FT 644 aa, and to Clostridium perfringens probable glycogen FT debranching enzyme Gde or CPE2336 SWALL:Q8XHY8 FT (EMBL:AP003193) (672 aa) fasta scores: E(): 2.1e-34, 28.4% FT id in 669 aa" FT /db_xref="GOA:Q5LGS6" FT /db_xref="InterPro:IPR008928" FT /db_xref="InterPro:IPR010401" FT /db_xref="InterPro:IPR024742" FT /db_xref="UniProtKB/TrEMBL:Q5LGS6" FT /protein_id="CAH06661.1" FT /translation="MSYLHFDKTLMINLEESLPREILRTNKSGAYHCTTIVDCNTRKYH FT GLLVIPVPNLDDENHVLLSSLDETVIQHGAEFNLGLHKYQGNHFSPNGHKYIREFDCEH FT IPATTYRVGGVILRKEKIFVHHENRILIRYTLVDAHSATTLRFRPFLAFRSVREYTHEN FT SQASRDYQLVENGIKTCMYPGYPELFMQLNKKNEFHYEPNWYRGIEYPKEQERGYDFNE FT DLYVPGYFEVDIKKGESIIFSAGISEISPRRLKQTFEAEVADRTPRDSFYHCLKNSAHQ FT FHNKQEEDHYILAGYPWFKCRARDMFVSLPGLTLAVDEIGEFEDVMETARKAINNYIKG FT EPIGCKIYEMDDPDVLLWAVWALQQYAKETSREQCRAKYGSLLEEIIDFIRQRKHDNLF FT LHENGLLYANGADRAITWMNSTVNGRPVIPRTGYIVEINALWYNALRFIADLVREGGNG FT LLADSLDAQAEVTGKSFVEVFRNEYGYLLDYVDGNMMDWSVRPNMIFTVAFDYSPLDRV FT QKKQVLDIVTKELLTPKGLRTLSPKSGGYNPNYVGPQIQRDYAYHQGTAWPWLMGFYME FT AYLRIYKMSGISFVERQLIGLEDEMTSHCVGSLPELFDGNPPFKGRGAVSFAMNVAEIL FT RILKLLSKYNL" FT CDS 1150884..1152158 FT /transl_table=11 FT /locus_tag="BF9343_0881" FT /old_locus_tag="BF0920" FT /product="putative glycosyl transferase" FT /note="Similar to Bacillus subtilis putative glycosyl FT transferase YqgM SWALL:YQGM_BACSU (SWALL:P54490) (359 aa) FT fasta scores: E(): 7e-14, 25.17% id in 282 aa, and to FT Bacteroides thetaiotaomicron putative glycosyltransferase FT BT4304 SWALL:AAO79409 (EMBL:AE016944) (424 aa) fasta FT scores: E(): 1.4e-163, 95.28% id in 424 aa, and to FT Thermoplasma acidophilum hypothetical protein Ta0340 FT SWALL:Q9HL90 (EMBL:AL445064) (388 aa) fasta scores: E(): FT 9.9e-35, 31.89% id in 417 aa" FT /db_xref="GOA:Q5LGS5" FT /db_xref="InterPro:IPR001296" FT /db_xref="InterPro:IPR013534" FT /db_xref="UniProtKB/TrEMBL:Q5LGS5" FT /protein_id="CAH06662.1" FT /translation="MKVLMFGWEFPPHILGGLGTASYGLTKGMSQQEDMEITFCIPKPW FT GDEDQSFLRIIGMNSTPIVWRDVDWEYVKGRVGSYMDPQLYFDLRDHIYADFNYLNAND FT LGCIEFSGRYPDNLHEEINNYSIVAGVIARQQEFEIIHSHDWLTYPAGIHAKQVSGKPL FT VIHVHATDFDRSRGNVNPTVYAIEKNGMDHADHIMCVSELTRQTVIHKYFQDPKKVSTV FT HNAVSPLSQEIQDIVPNKNPKEKVVTFLGRITMQKGPEYFVEAAAMVLQRTRNVRFVMA FT GSGDMMDQMIRLAAERGIADRFHFPGFMKGKQVYEVLKASDVYIMPSVSEPFGISPLEA FT MQCSVPSIISKQSGCAEILEKCIKTDYWDIHAMADAIYSICTYPAMYEYLRDEGKKEVD FT EIKWENVGYKVRGIYDEVIKNYGKQ" FT misc_feature 1151571..1152074 FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 135.4, E-value FT 8.7e-38" FT CDS 1152171..1153559 FT /transl_table=11 FT /locus_tag="BF9343_0882" FT /old_locus_tag="BF0921" FT /product="putative glycosyl hydrolase" FT /note="Similar to Bacteroides thetaiotaomicron putative FT alpha-amylase BT4305 SWALL:AAO79410 (EMBL:AE016944) (460 FT aa) fasta scores: E(): 3.9e-157, 90.04% id in 462 aa, and FT to Methanosarcina mazei alpha-amylase MM0862 SWALL:Q8PYJ9 FT (EMBL:AE013311) (398 aa) fasta scores: E(): 6.5e-45, 36.77% FT id in 397 aa, and to Methanosarcina acetivorans FT alpha-amylase ma4052 SWALL:Q8TIT9 (EMBL:AE011117) (396 aa) FT fasta scores: E(): 1.7e-44, 36.27% id in 397 aa" FT /db_xref="GOA:Q5LGS4" FT /db_xref="InterPro:IPR002509" FT /db_xref="InterPro:IPR004300" FT /db_xref="InterPro:IPR011330" FT /db_xref="UniProtKB/TrEMBL:Q5LGS4" FT /protein_id="CAH06663.1" FT /translation="MRTICLYFEIHQIIHLKRYRFFDIGADHYYYDDYANETGINEVAE FT RSYIPALNTLIEMVKNSGGAFKVALSISGVALEQLEIHAPAVIDLLHILNDTGCCEFLA FT EPYSHGLSSLANEDCFREEVMRQSEKMKQMFGKAPKVFRNSSLIYSDEIGATVASMGFK FT GMLTEGAKHVLGWKSPHYVYHCNQAPSLKLLLRDFKLSDDISLRFSNSDWSEYPLFADK FT FIGWIDALPQEEQVINIFMELKALGMAQPLSSNILEFLKALPYCAKEKGITFSTPSEII FT SKLKSVSQLDVPYPMSWVDEERDTSSWLGNVLQREAFSKLYSVAERVHLCDDRRIKQDW FT DYLQASNNFRFMTTKNTGVWLNRGIYDSPYDAFTNYMNILGDFIKRVNSLYPEDIDNEE FT LNSLLTTIKNQGEEIAELHKEVDRLQAKAEKAAKTVKAEPKAAPKKAAAKKPAAKKATA FT KKED" FT misc_feature 1152189..1153133 FT /note="Pfam match to entry PF03065 Glyco_hydro_57, Glycosyl FT hydrolase family 57, score 204.4, E-value 1.5e-58" FT CDS complement(1153945..1155435) FT /transl_table=11 FT /locus_tag="BF9343_0883" FT /old_locus_tag="BF0922" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4306 SWALL:AAO79411 (EMBL:AE016944) (542 aa) FT fasta scores: E(): 8.5e-20, 49.9% id in 541 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGS3" FT /protein_id="CAH06664.1" FT /translation="MKAKYVWVALLALTFFGCDDNTGTIGWDMLPDSDQNINGRYTTYE FT LTTNSDLSGPVFAKTSVGYVGKFTDKEFGEYEASFLAQLNSPDGISFPSVYDPETNPKG FT VMAGDSIHTAELILYYKSYFGDSINPCRMTVYELDENLTQNYYTDIDPLKYYNPNNLLA FT RKAYTAVDQSLSDSIRNSDDFYPNVRLTSEEITKLGKRIYRLNRDHPEYFKTSEAFINN FT VFKGIYAKNDYGNGTILYVDQINLNVVIRCHEKDSLGNNLKKKNGADSLYYTTRTFATT FT KEVIQANKFVNSEKLNEIAKKTDCTYLKSPAGIFTQATLPINKIYEELSHDTINAVKLT FT FNSYNQPDNGKFSMKAPTYVLLLREKERQSFFEENKLTDNITSYLAVHNAIISNKPTTN FT QYVFTNLTRLINACVNEKQEAKKKAGDSWNEAAWEAANPDWNKVVLIPVLVQYDSSSNK FT NMISIQHDLQPGYVKLEGGPDGTKLKLEVTYTNFNGKQ" FT CDS complement(1155459..1156151) FT /transl_table=11 FT /locus_tag="BF9343_0884" FT /old_locus_tag="BF0923" FT /product="possible glycogen synthase" FT /note="Similar to Bacillus stearothermophilus glycogen FT synthase GlgA SWALL:GLGA_BACST (SWALL:O08328) (485 aa) FT fasta scores: E(): 1.2e-07, 37.63% id in 93 aa, and to FT Bacteroides thetaiotaomicron putative glycogen synthase FT BT4307 SWALL:Q89ZR9 (EMBL:AE016944) (234 aa) fasta scores: FT E(): 2.6e-82, 89.38% id in 226 aa, and to Chlorobium FT tepidum glycogen synthase GlgA or CT2012 SWALL:GLGA_CHLTE FT (SWALL:Q8KAY6) (488 aa) fasta scores: E(): 4.8e-15, 30.61% FT id in 196 aa" FT /db_xref="InterPro:IPR013534" FT /db_xref="UniProtKB/TrEMBL:Q5LGS2" FT /protein_id="CAH06665.1" FT /translation="MPKWGNINERRNQLHEVIRLSGMNLIIDDTDHPLIIKVASIQSAR FT MQVYFIDNDDYFQNRLQTADENGVEYDDNDSRAIFYARGVLETVKKLRWCPDVIHCHGW FT MTALAPLYIKKAYKDEPSFRDAKVVFSVYEDDFKGTFNNDFASKLMLKGINKKDVATLK FT DPVDYATLCKLAVDYSDGIVQNSEHVNEDVMNYARQSGKLVLDYQAPDALADACNSFYD FT QVWEAEQK" FT CDS 1156530..1157378 FT /transl_table=11 FT /gene="panC" FT /locus_tag="BF9343_0885" FT /old_locus_tag="BF0924" FT /product="putative pantoate--beta-alanine ligase" FT /EC_number="6.3.2.1" FT /note="Similar to Thermotoga neapolitana FT pantoate--beta-alanine ligase PanC SWALL:PANC_THENE FT (SWALL:O86953) (280 aa) fasta scores: E(): 1.5e-42, 44.8% FT id in 279 aa, and to Bacteroides thetaiotaomicron FT pantoate--beta-alanine ligase BT4308 SWALL:AAO79413 FT (EMBL:AE016944) (282 aa) fasta scores: E(): 5e-98, 87.54% FT id in 281 aa, and to Thermotoga maritima FT pantoate--beta-alanine ligase PanC or TM1077 FT SWALL:PANC_THEMA (SWALL:Q9X0G6) (280 aa) fasta scores: E(): FT 7.2e-43, 45.19% id in 281 aa" FT /db_xref="GOA:Q5LGS1" FT /db_xref="HSSP:1IHO" FT /db_xref="InterPro:IPR003721" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGS1" FT /protein_id="CAH06666.1" FT /translation="MKVIHTIKDLQAELSVLKAQGKKVGLVPTMGALHAGHASLVKRSV FT NENEVTVVSVFVNPTQFNDKNDLVKYPRTLDADCKLLEACGATYAFAPSVEEMYPEPDT FT RQFSYAPLDTVMEGAFRPGHFNGVCQIVSKLFEAVKPHRAYFGEKDFQQLAIIREMVRQ FT MQFDLEIVGCPIVREEDGLALSSRNARLSAEERENALKISQTLFKSRTFAATHTVSETL FT KFVEDAIAAVPGLRLEYFEIVDGNTLQKVDNWNQTSYVVGCITVFCGDVRLIDNIKYKE FT S" FT misc_feature 1156530..1157366 FT /note="Pfam match to entry PF02569 Pantoate_ligase, FT Pantoate-beta-alanine ligase, score 383.8, E-value FT 1.5e-112" FT CDS 1157401..1157754 FT /transl_table=11 FT /gene="panD" FT /locus_tag="BF9343_0886" FT /old_locus_tag="BF0925" FT /product="putative aspartate 1-decarboxylase precursor" FT /EC_number="4.1.1.11" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT Escherichia coli O157:H7, and Shigella flexneri aspartate FT 1-decarboxylase precursor PanD or B0131 or C0160 or Z0142 FT or ECS0135 or SF0128 or s0130 SWALL:PAND_ECOLI FT (SWALL:P31664) (126 aa) fasta scores: E(): 5.4e-13, 44.86% FT id in 107 aa, and to Bacteroides thetaiotaomicron aspartate FT 1-decarboxylase precursor pand or BT4309 SWALL:AAO79414 FT (EMBL:AE016944) (117 aa) fasta scores: E(): 5.8e-43, 98.29% FT id in 117 aa, and to Wolinella succinogenes aspartate FT 1-decarboxylase precursor PanD SWALL:PAND_WOLSU FT (SWALL:O34246) (121 aa) fasta scores: E(): 4.3e-22, 58.97% FT id in 117 aa" FT /db_xref="GOA:Q5LGS0" FT /db_xref="InterPro:IPR003190" FT /db_xref="InterPro:IPR009010" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGS0" FT /protein_id="CAH06667.1" FT /translation="MMIEVLKSKIHCARVTEANLNYMGSITIDENLLDAANMIAGEKVY FT IADNNNGERFETYIIKGERGSGKICLNGAAARKVQPDDIVIIMSYALMDFEEAKSFKPT FT VIFPDPATNSVVK" FT misc_feature 1157401..1157751 FT /note="Pfam match to entry PF02261 Asp_decarbox, Aspartate FT decarboxylase, score 216.8, E-value 2.7e-62" FT CDS complement(1157937..1160225) FT /transl_table=11 FT /locus_tag="BF9343_0887" FT /old_locus_tag="BF0926" FT /product="putative NADPH-dependent glutamate synthase" FT /note="Similar to Pyrococcus kodakaraensis glutamate FT synthase SWALL:O33474 (EMBL:D86223) (481 aa) fasta scores: FT E(): 1.9e-64, 51.26% id in 476 aa, and to Bacteroides FT thetaiotaomicron NADPH-dependent glutamate synthase small FT chain BT4310 SWALL:AAO79415 (EMBL:AE016944) (763 aa) fasta FT scores: E(): 0, 91.35% id in 763 aa, and to Chlorobium FT tepidum glutamate synthase, small subunit Gltd-1 or CT0473 FT SWALL:Q8KF59 (EMBL:AE012823) (472 aa) fasta scores: E(): FT 3.8e-88, 57.54% id in 464 aa" FT /db_xref="GOA:Q5LGR9" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR006004" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="InterPro:IPR019480" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:Q5LGR9" FT /protein_id="CAH06668.1" FT /translation="MNKIISKEHFSEKVFKLVIEAPLIAKSRKAGHFVIVRVGEKGERM FT PLTIAAADPKAGTITLVVQEVGLSSTRLCELNEGDYITDVVGPLGQATHIENFGTVVCA FT GGGVGVAPMLPIVQALKAAGNRVITVLAGRSKELIILEKEMRESSDEVIIMTDDGSYGR FT KGLVTEGVEEVIKREKVNKCFAIGPAIMMKFVCLLTKKYEIPTEVSLNTIMVDGTGMCG FT ACRITIGGKTKFVCVDGPEFDGHQVDFDEMLKRMGAFKTIEREELHKLDECEATKVIDE FT NGRTAPWREALRKAIKAKDRANIERCQMNELDPEYRSHSRKEEVNQGLTKEQAVAEAQR FT CLDCANPGCMTGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVCGRVCPQEKQCE FT SKCIHLKMGKEAVAIGHLERFAADYERESGQISVPEVGEKNGIKVAVIGSGPAGLSFAG FT DMAKYGYDVTVFEALHEIGGVLKYGIPEFRLPNKIVDVEIENLAKMGVTFIKDCIVGKT FT ISVEQLEEEGFKGIFVASGAGLPNFMNIPGENSINIMSSNEYLTRVNLMDAASPDSDTP FT VAFGKNVAVIGGGNTAMDSVRTAKRLGAERAMIIYRRSEEEMPARLEEVKHAKEEGIEF FT LTLHNPIEYLADEQGRVKQVILQKMELGEPDASGRRSPVPIPGATETVDIDLAIVSVGV FT SPNPIVPSSIKGLELGRKGTITVNDQMQSSIPTIYAGGDIVRGGATVILAMGDGRRAAA FT AMNEQLSSK" FT misc_feature complement(1157997..1158899) FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 109.0, E-value FT 7.6e-30" FT misc_feature complement(1159632..1159934) FT /note="Pfam match to entry PF00175 NAD_binding_1, FT Oxidoreductase NAD-binding domain, score 16.6, E-value FT 4e-06" FT CDS complement(1160368..1161579) FT /transl_table=11 FT /locus_tag="BF9343_0888" FT /old_locus_tag="BF0927" FT /product="putative sugar transporter" FT /note="Similar to Brucella abortus glucose/galactose FT transporter GluP SWALL:GLUP_BRUAB (SWALL:Q44623) (412 aa) FT fasta scores: E(): 1.3e-35, 32.85% id in 414 aa, and to FT Bacteroides thetaiotaomicron glucose/galactose transporter FT BT4311 SWALL:AAO79416 (EMBL:AE016944) (386 aa) fasta FT scores: E(): 1.8e-134, 87.3% id in 386 aa, and to Brucella FT melitensis glucose/galactose transporter BmeII1053 FT SWALL:Q8YB48 (EMBL:AE009738) (412 aa) fasta scores: E(): FT 9.7e-36, 32.85% id in 414 aa" FT /db_xref="GOA:Q5LGR8" FT /db_xref="InterPro:IPR005964" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q5LGR8" FT /protein_id="CAH06669.1" FT /translation="MSSTQKNFALPLAFIGIMFFAIGFALGINSVLIPVLQGSLGITSA FT ESYLIIAATFVPFLIFGYPASMTIKAIGYKHTMALSFAMFAVAFGLYIPSASQESFPLF FT LVASFVSGTANAFLQASVNPYITILGPLDSAAKRISIMGICNKLAWPIPPLFLAFLIGK FT EVSDITVSDLFTPFYVIIAAFIILGIISLMAPLPEVKAAGEDDSEGGAEACPYAASKTS FT VWQFPHLLLGCLALFLYVGVETVSLGTLVDYANSLHLENAAAYAWIAPIGIVIGYICGI FT IFIPKYINQATALKICSILAIAGSILVVLTPADISIYFIAFIALGCSLMWPALWPLAMA FT DLGKFTKAGSSLLIMAMAGGAVIPTLFGYIKDIAGAQNAYWICLPCFLFILYYGMAGYK FT IRTK" FT misc_feature complement(order(1160392..1160460,1160470..1160538, FT 1160563..1160631,1160641..1160709,1160728..1160796, FT 1160827..1160895,1160992..1161060,1161097..1161165, FT 1161202..1161270,1161298..1161366,1161385..1161438, FT 1161481..1161546)) FT /note="12 probable transmembrane helices predicted for FT BF0927 by TMHMM2.0 at aa 12-33, 48-65, 72-94, 104-126, FT 139-161, 174-196, 229-251, 262-284, 291-313, 317-339, FT 348-370 and 374-396" FT misc_feature complement(1161499..1161579) FT /note="Signal peptide predicted for BF0927 by SignalP 2.0 FT HMM (Signal peptide probability 0.992) with cleavage site FT probability 0.604 between residues 27 and 28" FT CDS complement(1161779..1163053) FT /transl_table=11 FT /gene="serS" FT /locus_tag="BF9343_0889" FT /old_locus_tag="BF0928" FT /product="putative seryl-tRNA synthetase" FT /EC_number="6.1.1.11" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT Escherichia coli O157:H7, and Shigella flexneri seryl-tRNA FT synthetase SerS or B0893 or C1030 or Z1239 or ECS0978 or FT SF0852 or s0893 SWALL:SYS_ECOLI (SWALL:P09156) (430 aa) FT fasta scores: E(): 1.1e-51, 41.01% id in 434 aa, and to FT Bacteroides thetaiotaomicron seryl-tRNA synthetase BT4312 FT SWALL:AAO79417 (EMBL:AE016944) (424 aa) fasta scores: E(): FT 7.8e-149, 93.16% id in 424 aa, and to Chlorobium tepidum FT seryl-tRNA synthetase SerS or CT0606 SWALL:Q8KES6 FT (EMBL:AE012834) (427 aa) fasta scores: E(): 1.4e-62, 45.13% FT id in 432 aa" FT /db_xref="GOA:Q5LGR7" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR002317" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR010978" FT /db_xref="InterPro:IPR015866" FT /db_xref="UniProtKB/TrEMBL:Q5LGR7" FT /protein_id="CAH06670.1" FT /translation="MLTIKQITENTDAVIRGLEKKHFKGAKETIAQVIEVNDKRRNTQN FT QLDKNLAEVNSLSKTIGQLMKEGKKEEAEVAKARVAEIKESNKTLQADMDQAANDMLNL FT LYTIPNIPYDSVPEGVGAEDNVVEKMGGMETQLPTDALPHWELAKKYDLIDFDLGVKIT FT GAGFPVYKGKGAQLQRALINFFLDEARKSGYTEIMPPTVVNAASGYGTGQLPDKEGQMY FT HCEVDDLYLIPTAEVPVTNIYRDVILDEKQLPIKNCAYTQCFRREAGSYGKDVRGLNRL FT HEFSKVELVRIDKPEHSRQSHQEMLDHVEGLLQKLELPYRILRLCGGDMSFTAALCFDF FT EVYSEAQKRWLEVSSVSNFDTYQANRLKCRYRSGEKKTELCHTLNGSALALPRIVAALL FT ENHQTPEGIRIPKALVPYCGFDMID" FT misc_feature complement(1162094..1162558) FT /note="Pfam match to entry PF00587 tRNA-synt_2b, tRNA FT synthetase class II core domain (G, H, P, S and T), score FT 169.8, E-value 4e-48" FT misc_feature complement(1162190..1162264) FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT CDS complement(1163210..1163479) FT /transl_table=11 FT /gene="rpmA" FT /locus_tag="BF9343_0890" FT /old_locus_tag="BF0929" FT /product="putative 50S ribosomal protein L27" FT /note="Similar to Brucella abortus 50S ribosomal protein FT L27 RpmA or Rl27 SWALL:RL27_BRUAB (SWALL:Q8VW58) (89 aa) FT fasta scores: E(): 9.9e-21, 67.41% id in 89 aa, and to FT Bacteroides thetaiotaomicron 50S ribosomal protein L27 FT BT4313 SWALL:AAO79418 (EMBL:AE016944) (89 aa) fasta scores: FT E(): 8.3e-33, 96.62% id in 89 aa, and to Xylella fastidiosa FT 50S ribosomal protein L27 RpmA or xf2423 SWALL:RL27_XYLFA FT (SWALL:Q9PAS2) (85 aa) fasta scores: E(): 3.7e-21, 68.23% FT id in 85 aa" FT /db_xref="GOA:Q5LGR6" FT /db_xref="HSSP:1Y69" FT /db_xref="InterPro:IPR001684" FT /db_xref="InterPro:IPR018261" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGR6" FT /protein_id="CAH06671.1" FT /translation="MAHKKGVGSSKNGRESQSKRLGVKIFGGEACKAGNIIVRQRGTEF FT HPGENIGMGKDHTLFALVDGTVNFKVGREDRRYVSIIPAEATEA" FT misc_feature complement(1163234..1163476) FT /note="Pfam match to entry PF01016 Ribosomal_L27, Ribosomal FT L27 protein, score 182.9, E-value 4.3e-52" FT misc_feature complement(1163336..1163380) FT /note="PS00831 Ribosomal protein L27 signature." FT CDS complement(1163502..1163819) FT /transl_table=11 FT /locus_tag="BF9343_0891" FT /old_locus_tag="BF0930" FT /product="putative 50S ribosomal protein L21" FT /note="Similar to Staphylococcus epidermidis 50S ribosomal FT protein L21 Se1330 SWALL:Q8CS87 (EMBL:AE016748) (102 aa) FT fasta scores: E(): 2.8e-12, 46.66% id in 105 aa, and to FT Bacteroides thetaiotaomicron 50S ribosomal protein L21 FT BT4314 SWALL:AAO79419 (EMBL:AE016944) (105 aa) fasta FT scores: E(): 1.4e-34, 91.42% id in 105 aa, and to FT Clostridium perfringens 50S ribosomal protein L21 CPE2130 FT SWALL:Q8XII9 (EMBL:AP003193) (103 aa) fasta scores: E(): FT 4e-13, 45.71% id in 105 aa" FT /db_xref="GOA:Q5LGR5" FT /db_xref="InterPro:IPR001787" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGR5" FT /protein_id="CAH06672.1" FT /translation="MYAIVEINGQQFKAEAGQKLFVHHIQNAENGATVEFDKVLLVDKD FT GNVTVGAPTVDGAKVVCQIVSSLVKGDKVLVFHKKRRKGHRKLNGHRQQFTELTITEVV FT A" FT misc_feature complement(1163526..1163819) FT /note="Pfam match to entry PF00829 Ribosomal_L21p, FT Ribosomal prokaryotic L21 protein, score 134.8, E-value FT 1.3e-37" FT CDS complement(1164597..1165265) FT /transl_table=11 FT /locus_tag="BF9343_0892" FT /old_locus_tag="BF0931" FT /product="putative haloacid dehalogenase-like hydrolase" FT /note="Similar to Erwinia chrysanthemi indigoidine FT systhesis protein IdgB SWALL:Q9KHB5 (EMBL:AF265211) (230 FT aa) fasta scores: E(): 5.7e-12, 30.69% id in 215 aa, and to FT Bacteroides thetaiotaomicron Hpr BT4315 SWALL:Q89ZR1 FT (EMBL:AE016944) (213 aa) fasta scores: E(): 1.7e-50, 65.72% FT id in 213 aa, and to Methanosarcina acetivorans haloacid FT dehalogenase-like hydrolase ma2967 SWALL:Q8TLR4 FT (EMBL:AE010999) (279 aa) fasta scores: E(): 1.1e-32, 49.04% FT id in 210 aa" FT /db_xref="GOA:Q5LGR4" FT /db_xref="InterPro:IPR005833" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006439" FT /db_xref="InterPro:IPR023214" FT /db_xref="PDB:3D6J" FT /db_xref="UniProtKB/TrEMBL:Q5LGR4" FT /protein_id="CAH06673.1" FT /translation="MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRT FT IGKTLEESFSILTGITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIR FT IGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVL FT YIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSGCPL FT " FT misc_feature complement(1164702..1165259) FT /note="Pfam match to entry PF00702 Hydrolase, haloacid FT dehalogenase-like hydrolase, score 113.2, E-value 4.3e-31" FT CDS complement(1165313..1165828) FT /transl_table=11 FT /locus_tag="BF9343_0893" FT /old_locus_tag="BF0932" FT /product="putative lipoprotein" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT Escherichia coli O157:H7, and Shigella flexneri lipoprotein FT Spr precursor or B2175 or C2712 or Z3434 or ECS3067 or FT SF2262 or s2391 SWALL:SPR_ECOLI (SWALL:P77685) (188 aa) FT fasta scores: E(): 4e-16, 38.31% id in 154 aa, and to FT Bacteroides thetaiotaomicron putative lipoprotein protein FT BT4317 SWALL:AAO79422 (EMBL:AE016944) (170 aa) fasta FT scores: E(): 1.4e-47, 71.77% id in 163 aa, and to FT Shewanella oneidensis lipoprotein, Nlp/P60 family so0061 FT SWALL:Q8EKN1 (EMBL:AE015458) (154 aa) fasta scores: E(): FT 8.5e-16, 38.88% id in 162 aa" FT /db_xref="InterPro:IPR000064" FT /db_xref="UniProtKB/TrEMBL:Q5LGR3" FT /protein_id="CAH06674.1" FT /translation="MKKYLFNLLLFTVLVIGLSGCRTSAPKLDYKKLARASVRLGVDIG FT MEDNHKLYLEAAEWIGTPYRGGGETKRGTDCSGMTCQIYKKVYHIKLQRSTDGQKKESS FT KVARRNLREGDLVFFSSRKSRRKVAHVGIYLKDGKFVHASTSQGVIVSSLNEPYYRTHW FT ISGGRVRK" FT misc_feature complement(1165322..1165663) FT /note="Pfam match to entry PF00877 NLPC_P60, NLP/P60 FT family, score 130.4, E-value 2.8e-36" FT misc_feature complement(1165757..1165828) FT /note="Signal peptide predicted for BF0932 by SignalP 2.0 FT HMM (Signal peptide probability 0.984) with cleavage site FT probability 0.829 between residues 24 and 25" FT misc_feature complement(1165766..1165798) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(1165833..1166540) FT /transl_table=11 FT /locus_tag="BF9343_0894" FT /old_locus_tag="BF0933" FT /product="putative ATP-binding component of ABC transporter FT protein" FT /note="Similar to Lactobacillus sakei L45 hypothetical 33.6 FT kDa protein LasY SWALL:Q9AEC8 (EMBL:Z54312) (300 aa) fasta FT scores: E(): 1.2e-19, 35.51% id in 214 aa, and to FT Bacteroides thetaiotaomicron ATP-binding protein BT4318 FT SWALL:AAO79423 (EMBL:AE016944) (234 aa) fasta scores: E(): FT 2.9e-73, 83.33% id in 234 aa, and to Pyrococcus abyssi ABC FT transporter, ATP-binding protein PyrAB10160 or Pab1696 FT SWALL:Q9UZY1 (EMBL:AJ248286) (253 aa) fasta scores: E(): FT 2.2e-20, 34.04% id in 235 aa" FT /db_xref="GOA:Q5LGR2" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q5LGR2" FT /protein_id="CAH06675.1" FT /translation="MITIHNLRKNFGTQTAVDIENYTINQGEMVGLVGNNGAGKTTLFR FT LMLDLLKADTGEIIINDIHVNQSEDWKSFTGAFIDDGFLISYLTPEEYFYFIGKMYGLK FT KEEVDERLIPFERFMNGEVLGQKKFIRNFSAGNKQKIGIVSAMLHYPKLIILDEPFNFL FT DPSSQSVIKHLLKKYNEEHNATVIISSHNLNHTVDVCPRIAVLEHGVIIRDLVNENNSA FT EKELEDYFNVEEE" FT misc_feature complement(1165914..1166462) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 134.2, E-value 2e-37" FT misc_feature complement(1166100..1166144) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(1166418..1166441) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(1166572..1168053) FT /transl_table=11 FT /locus_tag="BF9343_0895" FT /old_locus_tag="BF0934" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4319 SWALL:AAO79424 (EMBL:AE016944) (496 aa) FT fasta scores: E(): 1.5e-128, 62.9% id in 496 aa" FT /db_xref="GOA:Q5LGR1" FT /db_xref="UniProtKB/TrEMBL:Q5LGR1" FT /protein_id="CAH06676.1" FT /translation="MLFNELRLHGKLAAKRHPMYEKNKIGKYIMYASFIFWGAYFIFIG FT IGLAKAISTEVPNMEAYHILNSGLIFALALDFVIRFPFQKTPTQEVKPYLLLPVKRIRI FT LDFLLLRHGLSSFNLIWLFLFVPFAALTVFPFYGISGVLTYSIGIWLLMVFNGYWYLLC FT RTLINEHIWWVVLPIVVYSGIAIAIFIPKTGFISNFFMNLGEGYIEGNLLAYLGTLAAT FT VLVWCINRKVMTGLIYNEINKVEDTKVKTVSEYRFLERFGEVGEYMRLELKMLLRNKRC FT KASLRSVAMLVIIFSIILSFSSTYDHMKSFVQVYSFLGFGMVILIQLMGFEGNYIDGLM FT TRKESIKSLLTAKYYIYSLAEIIPLILLIPAFVMGKASLLGAVALIFLTTGPVYCILFQ FT LAVYNHKTVPLNESITGKQSMNTGMQMLISFGLFIVPTTLYGTLPMLLGQTWAYIVILI FT IGLGFTLTSPMWINNVYVRFMQRRYENMEGFRDSK" FT misc_feature complement(order(1166632..1166700,1166710..1166778, FT 1166839..1166907,1166935..1166994,1167055..1167123, FT 1167151..1167207,1167370..1167438,1167481..1167549, FT 1167568..1167627,1167637..1167705,1167805..1167873, FT 1167901..1167969)) FT /note="12 probable transmembrane helices predicted for FT BF0934 by TMHMM2.0 at aa 29-51, 61-83, 117-139, 143-162, FT 169-191, 206-228, 283-301, 311-333, 354-373, 383-405, FT 426-448 and 452-474" FT CDS complement(1168150..1170969) FT /transl_table=11 FT /locus_tag="BF9343_0896" FT /old_locus_tag="BF0935" FT /product="putative zinc protease" FT /note="Similar to Escherichia coli probable zinc protease FT PqqL or B1494 SWALL:PQQL_ECOLI (SWALL:P31828) (931 aa) FT fasta scores: E(): 1.5e-56, 26.75% id in 927 aa, and to FT Bacteroides thetaiotaomicron putative zinc protease BT4320 FT SWALL:AAO79425 (EMBL:AE016944) (946 aa) fasta scores: E(): FT 2.4e-217, 60.31% id in 945 aa, and to Porphyromonas FT gingivalis immunoreactive 106 kDa antigen PG115 FT SWALL:Q9XBW5 (EMBL:AF153767) (941 aa) fasta scores: E(): FT 1.2e-160, 47.35% id in 944 aa" FT /db_xref="GOA:Q5LGR0" FT /db_xref="InterPro:IPR001431" FT /db_xref="InterPro:IPR007863" FT /db_xref="InterPro:IPR011237" FT /db_xref="InterPro:IPR011249" FT /db_xref="InterPro:IPR011765" FT /db_xref="UniProtKB/TrEMBL:Q5LGR0" FT /protein_id="CAH06677.1" FT /translation="MKHLFRGLLLVAVILCCNFQQAFAQQMPPIPIDKNVRIGKLDNGL FT TYYIRKNNLPANRADFYIAQKVGSIQEEENQRGLAHFLEHMCFNGTTHFPGDALKQYLE FT RIGVKFGENLNAYTAIDETVYNISNVPVKTPGAVDSCLLILHDWSNDLTLDPKEIDKER FT GVINEEWRTRMSAMMRMQEKLLPMMYPGDKYAHSFPIGTMDVVMNFKPQTLRDYYEKWY FT RPDLQGIVIVGDIDVDAVEAKIKTMFADIPAQPNAAERIYYPVADNKEPIICILKDKEQ FT PHVQVLLFNKHEAVPDNQKGNVDYLIQQYAKNLISIMLNARLNELVQTANPPYIYAGAD FT DSNFFVAKTKDAFLGIVVCKEDSIENGIAAMLRELERARQFGFTETEYNRARAEYLRQL FT ESSYNERDKQKNEKYVNEYVRHFLDNEPIPGIENEYTIINQIAPNIPVAAINQLMKGLI FT TDDNQALALFAPEKEDLKLPSEAAIAKLLKDAKTEKLTAYVDKVSDEPLMAEAPKGGKI FT VSESKDNIFGATTLTLSNGVKVIIKKTDFKADEIRMKGVSLGGSSVFPDSEIININGLD FT AVGVGGLGNFSAVNLEKVLAGKKASVSYDIANKTESVSGSCSPKDFETMMQLTYLTFTA FT PRRDDDAFASYKNRNKAALKNQELNPNVAFSDSIQAGIYMKHPRIIRIKADMVDQMDYD FT KILSMYQDRFKDASDFTFIFVGNVDVEKMKPVIAEYLGALPAVNRKETFKDNKIEMRQG FT IYKNEFTKQQETPKASVFAFYNGDCKYDLRNNLLLSMTSQILDLIYTEKVREDEGGTYG FT VYVGGTLQKYPKEKAILQIIFDTAPEKKEKLMKIIFGEIDNITKTGPSEANLNKVKEYM FT LKKHTEDLKENSYWLGSIDEYLYTGMNRMNDYEKIVNSITVNDIRKFADDLFKQKNEVE FT VTMVSPEKK" FT misc_feature complement(1168357..1168899) FT /note="Pfam match to entry PF05193 Peptidase_M16_C, FT Peptidase M16 inactive domain, score 58.4, E-value 1.3e-14" FT misc_feature complement(1169785..1170345) FT /note="Pfam match to entry PF05193 Peptidase_M16_C, FT Peptidase M16 inactive domain, score 71.9, E-value 1.2e-18" FT misc_feature complement(1170397..1170834) FT /note="Pfam match to entry PF00675 Peptidase_M16, FT Insulinase (Peptidase family M16), score 97.8, E-value FT 1.8e-26" FT misc_feature complement(1170697..1170768) FT /note="PS00143 Insulinase family, zinc-binding region FT signature." FT misc_feature complement(1170898..1170969) FT /note="Signal peptide predicted for BF0935 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.995 between residues 24 and 25" FT CDS complement(1171117..1171920) FT /transl_table=11 FT /gene="kdsA" FT /locus_tag="BF9343_0897" FT /old_locus_tag="BF0936" FT /product="putative 2-dehydro-3-deoxyphosphooctonate FT aldolase" FT /EC_number="2.5.1.55" FT /note="Similar to Pseudomonas aeruginosa FT 2-dehydro-3-deoxyphosphooctonate aldolase KdsA or Pa3636 FT SWALL:KDSA_PSEAE (SWALL:Q9ZFK4) (281 aa) fasta scores: E(): FT 4.1e-40, 45.52% id in 268 aa, and to Bacteroides FT thetaiotaomicron 2-dehydro-3-deoxyphosphooctonate aldolase FT BT4321 SWALL:AAO79426 (EMBL:AE016944) (266 aa) fasta FT scores: E(): 6.4e-89, 91.35% id in 266 aa, and to FT Chlorobium tepidum 2-dehydro-3-deoxyphosphooctonate FT aldolase KdsA or CT0088 SWALL:Q8KG80 (EMBL:AE012788) (280 FT aa) fasta scores: E(): 6.5e-48, 51.96% id in 254 aa" FT /db_xref="GOA:Q5LGQ9" FT /db_xref="InterPro:IPR006218" FT /db_xref="InterPro:IPR006269" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:Q5LGQ9" FT /protein_id="CAH06678.1" FT /translation="MIEQLKNNKTGNFFLLAGPCVIEGEEMAMRIAEKIVNITDKLGIP FT YVFKGSYRKANRSRLDSFMGIGDEKALKVLEKVHNTFGVPTVTDIHAADEAAMAADYVD FT ILQIPAFLCRQTDLLVAAAQTGKTINIKKGQFLSPLAMQFAADKVIEAGNKNVMLTERG FT TTFGYQDLVIDYRGIPEMQSFGYPVILDVTHSLQQPNQTNGVTGGMPQLIETVAKAGIA FT VGADGLFIETHENPAVAKSDGANMLKLDRLEGLLTKLVKIREAIM" FT misc_feature complement(1171120..1171911) FT /note="Pfam match to entry PF00793 DAHP_synth_1, DAHP FT synthetase I family, score 293.3, E-value 2.5e-85" FT misc_feature complement(1171537..1171560) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(1171936..1172862) FT /transl_table=11 FT /locus_tag="BF9343_0898" FT /old_locus_tag="BF0937" FT /product="conserved hypothetical protein" FT /note="Similar to Bacillus subtilis multidrug transporter FT BmrU SWALL:BMRU_BACSU (SWALL:P39074) (297 aa) fasta scores: FT E(): 6.9e-09, 27.55% id in 254 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein, with a FT diacylglycerol kinase catalytic domain BT4322 FT SWALL:AAO79427 (EMBL:AE016944) (308 aa) fasta scores: E(): FT 1e-108, 88.63% id in 308 aa, and to Thermotoga maritima FT hypothetical protein Tm0358 SWALL:Q9WYJ3 (EMBL:AE001716) FT (304 aa) fasta scores: E(): 6.8e-18, 27.39% id in 303 aa" FT /db_xref="GOA:Q5LGQ8" FT /db_xref="InterPro:IPR001206" FT /db_xref="UniProtKB/TrEMBL:Q5LGQ8" FT /protein_id="CAH06679.1" FT /translation="MSVEPGKWGVIYNPKAGTRKVQKRWKEIKEYMDSKGVSYDYVQSE FT GFGSVERLAGILANNGYRTIVVVGGDGALNDAINGIMSSNAEKKEEIAIGIIPNGIGND FT FARYWELNLEYKQAVDWIINNRQKKIDVGYCNFYDGEKHQRRYFLNAVNIGLGARIVKI FT TDQTKRFWGVKFLSYLAALFLLIFERKLYRSHLKINDEHIRGRIMTVCVGSATGYGQTP FT SAVPYNGWLDVSVIYRPEFLQILSGLWMLIQGRILNHKVVKSYRTRKVKVLRAQNAAVD FT LDGRLLPRHFPIEIGIIPEATTLIIPN" FT misc_feature complement(1172302..1172355) FT /note="1 probable transmembrane helix predicted for BF0937 FT by TMHMM2.0 at aa 170-187" FT misc_feature complement(1172449..1172844) FT /note="Pfam match to entry PF00781 DAGKc, Diacylglycerol FT kinase catalytic domain (presumed), score 18.8, E-value FT 3.5e-06" FT misc_feature complement(1172695..1172724) FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT CDS complement(1173154..1174074) FT /transl_table=11 FT /locus_tag="BF9343_0899" FT /old_locus_tag="BF0938" FT /product="putative tRNA delta(2)-isopentenylpyrophosphate FT transferase" FT /note="Similar to Bacillus halodurans tRNA FT delta(2)-isopentenylpyrophosphate transferase MiaA or FT BH2366 SWALL:MIAA_BACHD (SWALL:Q9KAC3) (314 aa) fasta FT scores: E(): 1.1e-24, 35.18% id in 324 aa, and to FT Bacteroides thetaiotaomicron tRNA FT delta(2)-isopentenylpyrophosphate transferase BT4323 FT SWALL:Q89ZQ3 (EMBL:AE016944) (306 aa) fasta scores: E(): FT 5.4e-95, 86.18% id in 304 aa, and to Treponema pallidum FT tRNA delta(2)-isopentenylpyrophosphate transferase MiaA or FT TP0637 SWALL:MIAA_TREPA (SWALL:O83644) (316 aa) fasta FT scores: E(): 3.3e-37, 43.98% id in 291 aa" FT /db_xref="GOA:Q5LGQ7" FT /db_xref="InterPro:IPR002627" FT /db_xref="InterPro:IPR018022" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGQ7" FT /protein_id="CAH06680.1" FT /translation="MPDYDLIAILGPTASGKTPFAAALAAELNTEIISADSRQIYRGMD FT LGTGKDLEDYTINGRQIPYHLIDIADPGYKYNVFEYQRDFLTAYETIKQKGCLPVLCGG FT TGLYLESVLKGYRLIPVPENQELRVRLAEKSLEELTAILSSYKTLHNSTDVDTVKRAIR FT AIEIEEYYAKTPIEEREFPQLNSLIIGVDIDRELRREKITRRLKQRLDDGMVEEVRRLL FT AEGIQPDDLIYYGLEYKYLTLYAIGKMTYDEMFTGLETAIHQFAKRQMTWFRGMERRGF FT TIHWVDASLPMEEKINFVKQKLKEF" FT misc_feature complement(1173208..1173963) FT /note="Pfam match to entry PF01715 IPPT, IPP transferase, FT score 109.1, E-value 7.5e-30" FT misc_feature complement(1174021..1174044) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(1174294..1175499) FT /transl_table=11 FT /locus_tag="BF9343_0900" FT /old_locus_tag="BF0939" FT /product="putative ATP/GTP-binding transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4325 SWALL:AAO79430 (EMBL:AE016944) (401 aa) FT fasta scores: E(): 4.7e-129, 82% id in 400 aa" FT /db_xref="GOA:Q5LGQ6" FT /db_xref="UniProtKB/TrEMBL:Q5LGQ6" FT /protein_id="CAH06681.1" FT /translation="MNNLVWKLLRQHISIGQLTGFFFANLFGMVIVLLSAQFYKDVVPI FT FTEGDSFMKKDYMTATKKISTLGSFAGKSNTFSSEEIEELKKQPFTRSVGAFTPSQFKV FT SAGLGMQEAGIHLSTEMFFEAVPDKFVDVSLDKWHFDENTHTIPIIIPRNYLNLYNFGF FT AQSRSLPKLSEGLMSLIQMDILMRGNGRVEQYKGNIVGFSNRLNTILVPQSFMNWANQN FT FAPDSQPDPSRLIIEVDNPADASIAKYFQQKGYETEDGKLDAGKTTYFLRLIVGIVLAV FT GLFISILSFYILMLSIFLLLQKNTVKLESLLLIGYSPSRVALPYQILTLGLNVVVLLLS FT VGIVSWARTSYLTTLNLLFPQMSVGSLWPTFAIGIFLFLLVSSINVIILKKKMLSIWIH FT KA" FT misc_feature complement(order(1174333..1174401,1174444..1174512, FT 1174597..1174665,1175395..1175463)) FT /note="4 probable transmembrane helices predicted for FT BF0939 by TMHMM2.0 at aa 13-35, 279-301, 330-352 and FT 367-389" FT misc_feature complement(1174699..1174722) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(1175496..1176140) FT /transl_table=11 FT /locus_tag="BF9343_0901" FT /old_locus_tag="BF0940" FT /product="putative ATP-binding component of ABC FT transporter" FT /note="Similar to Streptomyces hygroscopicus FT ABC-transporter OrfX SWALL:Q54289 (EMBL:X86780) (235 aa) FT fasta scores: E(): 8.3e-12, 31.7% id in 205 aa, and to FT Bacteroides thetaiotaomicron ABC transporter ATP-binding FT protein BT4326 SWALL:AAO79431 (EMBL:AE016944) (217 aa) FT fasta scores: E(): 5.3e-68, 82.71% id in 214 aa, and to FT Streptococcus mutans putative ABC transporter, ATP-binding FT protein SMU.1094 SWALL:Q8DU56 (EMBL:AE014947) (218 aa) FT fasta scores: E(): 5.1e-12, 30.68% id in 189 aa" FT /db_xref="GOA:Q5LGQ5" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:Q5LGQ5" FT /protein_id="CAH06682.1" FT /translation="MDSIHLQQTLPQVFADRNSITSDVWHRNLVFHKGKSYLIEAASGT FT GKSSLCSYIYGYRNDYQGIINFDETNIKAYPVKQWVEIRKHSLSMLFQDLRIFTELTAI FT ENIRLKNNLTGYKTRKEVLSLFEALGLSDKLNVKAGKLSFGQQQRVAFIRSLCQPFDFI FT FLDEPISHLDDNNARIMGELVMEEASKQGAGIIVTSIGKHIELTYDRILKL" FT misc_feature complement(1175499..1176041) FT /note="Pfam match to entry PF00005 ABC_tran, ABC FT transporter, score 92.4, E-value 7.9e-25" FT misc_feature complement(1175673..1175717) FT /note="PS00211 ABC transporters family signature." FT misc_feature complement(1175997..1176020) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(1176153..1177706) FT /transl_table=11 FT /locus_tag="BF9343_0902" FT /old_locus_tag="BF0941" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4327 SWALL:AAO79432 (EMBL:AE016944) (515 aa) FT fasta scores: E(): 4.4e-115, 63.05% id in 517 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGQ4" FT /protein_id="CAH06683.1" FT /translation="MVKRMISQLSVLAVLIVFMAACSKKAEYIHVIPADASAVASINLN FT SLADKAGLNDKQNEGMKQKMMEALKSGMNAAAFQQLEKIMKNPSQSGIDVKAPVFVFTS FT KTFISPTIVAKVSNIEDLRASLDLMAKEGICQPIAEEEGYSFTSLQKNNLLVFNENAAV FT LTEAYGTSQMDVAKQTISTLLKQTEENSIASNGSFRKMQDQKGDINFFASMDAVPKMYT FT QQISLGLSSQIDLSEVKAVGNLNFEKGKIALQIETYSDNAETDALLKKQAQAVKKLNTT FT FLQNFPESTLAFLNIGVNGAAFYDLLFNNEEFRRNVSLAKADEVKSLFASFDGDISIGL FT INVTLNSVPTFAAYADAKNGNALKALYDNKKQLKLGKNEDIIQLGENEYVYKSRATNVF FT FGIRNKQMYATNDELLYKSISKPVEKSIKDAGYVSDMKGKNVFFVINMDAILDLPVVKM FT MAGFGGEEYQTYYKLASKISYIEAFSDSEGKTETAILLKNKDDNALKQIVDFAKQFAGM FT " FT misc_feature complement(1177632..1177706) FT /note="Signal peptide predicted for BF0941 by SignalP 2.0 FT HMM (Signal peptide probability 0.978) with cleavage site FT probability 0.307 between residues 25 and 26" FT misc_feature complement(1177641..1177673) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(1177734..1178423) FT /transl_table=11 FT /locus_tag="BF9343_0903" FT /old_locus_tag="BF0942" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4328 SWALL:AAO79433 (EMBL:AE016944) FT (232 aa) fasta scores: E(): 3.2e-76, 86.46% id in 229 aa, FT and to Pseudomonas putida conserved hypothetical protein FT tigr00046 PP4985 SWALL:AAN70551 (EMBL:AE016792) (239 aa) FT fasta scores: E(): 2.8e-12, 29.68% id in 219 aa, and to FT Xanthomonas campestris hypothetical protein Xcc2885 FT SWALL:Q8P6T0 (EMBL:AE012401) (244 aa) fasta scores: E(): FT 6.7e-12, 34.24% id in 219 aa" FT /db_xref="GOA:Q5LGQ3" FT /db_xref="InterPro:IPR006700" FT /db_xref="InterPro:IPR015947" FT /db_xref="UniProtKB/TrEMBL:Q5LGQ3" FT /protein_id="CAH06684.1" FT /translation="MHVFYTPDIQTSTELPEEEAQHCVRVLRLTAGDEISLTDGKGNFY FT RAEISVATHKRCLVNIKETIYQEPLWDGHLHIAMAPTKNMDRNEWFAEKATEIGFDELT FT FLNCRFSERKVIKTERIEKILVSAIKQSLKARLPRLNEMTDFCTFIEKDFKGQKFIAHC FT YEGEKPLLKDVLTKGEDALVLIGPEGDFSEEEVKKAIEKGFVPISLGKSRLRTETAALV FT ACHTMNM" FT misc_feature complement(1177740..1178060) FT /note="Pfam match to entry PF04452 DUF558, Protein of FT unknown function (DUF558), score 65.1, E-value 1.3e-16" FT CDS complement(1178429..1178998) FT /transl_table=11 FT /locus_tag="BF9343_0904" FT /old_locus_tag="BF0943" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein with a conserved domain BT4329 FT SWALL:AAO79434 (EMBL:AE016944) (198 aa) fasta scores: E(): FT 2.8e-51, 70.83% id in 192 aa, and to Leptospira interrogans FT conserved hypothetical protein with Uvr motif la1935 FT SWALL:Q8F4V4 (EMBL:AE011366) (190 aa) fasta scores: E(): FT 6.9e-19, 33.88% id in 183 aa, and to Chlorobium tepidum FT hypothetical protein CT0265 SWALL:Q8KFQ7 (EMBL:AE012805) FT (204 aa) fasta scores: E(): 3.4e-18, 41.45% id in 193 aa" FT /db_xref="GOA:Q5LGQ2" FT /db_xref="InterPro:IPR001943" FT /db_xref="InterPro:IPR003729" FT /db_xref="UniProtKB/TrEMBL:Q5LGQ2" FT /protein_id="CAH06685.1" FT /translation="MDKKVELQVLNISNSQAQVGAYAMVLGEVDGERQLPIIIGPAEAQ FT ATAICLKGIKAPRPLTHDLFYSCLNVLGATLLRVLIYKAKEGVFYSYIYFKKDEEIIRI FT DARTSDAVALAVRADCPIFIYESILERECIRLTDGDERPDTPEEDENSRTEPVSIISLE FT EALNKAIQEENYELAARLRDEINRHK" FT misc_feature complement(1178432..1178533) FT /note="Pfam match to entry PF02151 UVR, UvrB/uvrC motif, FT score 19.9, E-value 0.0007" FT misc_feature complement(1178576..1178989) FT /note="Pfam match to entry PF02577 DUF151, Uncharacterised FT ACR, COG1259, score 97.9, E-value 1.7e-26" FT CDS complement(1179001..1180260) FT /transl_table=11 FT /locus_tag="BF9343_0905" FT /old_locus_tag="BF0944" FT /product="putative nucleoside/H+ permease" FT /note="Similar to Escherichia coli xanthosine permease XapB FT or B2406 SWALL:XAPB_ECOLI (SWALL:P45562) (418 aa) fasta FT scores: E(): 1.2e-93, 56.59% id in 417 aa, and to FT Bacteroides thetaiotaomicron xanthosine permease BT4330 FT SWALL:AAO79435 (EMBL:AE016944) (416 aa) fasta scores: E(): FT 6.2e-149, 87.56% id in 418 aa, and to Salmonella typhi FT xanthosine permease STY2657 or XapB or t0436 SWALL:AAO68154 FT (EMBL:AL627274) (418 aa) fasta scores: E(): 7.1e-96, 57.93% FT id in 416 aa" FT /db_xref="GOA:Q5LGQ1" FT /db_xref="InterPro:IPR004740" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:Q5LGQ1" FT /protein_id="CAH06686.1" FT /translation="MNIKNRLIIMNFLQFFVWGSWLISLGGYMERGLHFEGGQIGAIFA FT TMGIASIIMPGITGIIADKWFNAERLYGICHLLGAGCLFYASTATDYNQMYWAMLLNLM FT VYMPTLSLANTVSYNALEQYKCDLVKDFPPIRVWGTIGFICAMWAVDLTGFKNSSAQLY FT VGASSALLLGLYSFTLPPCPPAKNQSKTLLSSFGLDALSLFKRKKMAIFFFFSMLLGAA FT LQITNTYGDAFLGSFAKIPEFADSFGVKHSVILLSISQMSETLFILAIPFFLKHFGIKR FT VMLISMFAWVFRFGLFGFGDPGSGIWMLILSMIVYGMAFDFFNISGSLFVELETKPETR FT ASAQGLFFIMTNGLGAVIGGYASGAVVDAFSVYENGMLASRNWPAIWFIFAAYALAIGI FT LFAIVFRYKHQPGELKKVNN" FT misc_feature complement(1179031..1180260) FT /note="Pfam match to entry PF03825 Nuc_H_symport, FT Nucleoside H+ symporter, score 629.3, E-value 1.9e-186" FT misc_feature complement(order(1179046..1179114,1179157..1179225, FT 1179283..1179351,1179364..1179417,1179436..1179504, FT 1179562..1179630,1179724..1179783,1179811..1179867, FT 1179904..1179972,1180000..1180059,1180078..1180146, FT 1180174..1180242)) FT /note="12 probable transmembrane helices predicted for FT BF0944 by TMHMM2.0 at aa 7-29, 39-61, 68-87, 97-119, FT 132-150, 160-179, 211-233, 253-275, 282-299, 304-326, FT 346-368 and 383-405" FT CDS complement(1181029..1181247) FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0906" FT /old_locus_tag="BF0945" FT /product="putative transposase (pseudogene)" FT /note="Pseudogene. Similar to parts of Synechocystis sp. FT transposase SLL1861 SWALL:P74487 (EMBL:D90915) (254 aa) FT fasta scores: E(): 7.7e-10, 41.66% id in 72 aa, of FT Synechocystis sp. transposase SLR0511 SWALL:Q55831 FT (EMBL:D64004) (259 aa) fasta scores: E(): 1.9e-09, 40.27% FT id in 72 aa, and of Synechocystis sp. transposase SLR0265 FT SWALL:P73880 (EMBL:D90910) (261 aa) fasta scores: E(): FT 1.9e-09, 40.27% id in 72 aa. Note This CDS contains two FT stop codons at residues 34 and 40 respectively" FT CDS 1181360..1182517 FT /transl_table=11 FT /locus_tag="BF9343_0907" FT /old_locus_tag="BF0946" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT0664 SWALL:AAO75771 (EMBL:AE016928) (382 aa) FT fasta scores: E(): 2.3e-06, 21.11% id in 412 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT0661 FT SWALL:AAO75768 (EMBL:AE016928) (408 aa) fasta scores: E(): FT 9.5e-06, 21.58% id in 403 aa" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LGQ0" FT /protein_id="CAH06688.1" FT /translation="MKQTKTILAVILLVVLVGCGENIQSNNDLIIVDVSKSYPKKELIL FT QDFMDVEYVALETTDEFLTQGLVQDVGKEYILATNRNNDGDIFIFDRKTGKGVRKINRR FT GQGAEEYARINEIILDENNGEIFVKSPGNKILVYDLYGKFKRCLSLDREVSSIFDYDKD FT NLICYDMSDYHSKGEDRTKSYHIILSKQDGSITRDIFIPFKTIDTPIVNDGDRFIANYS FT YQIRLSNGKCTLMDTSADTLYNYASDGTLSPFVVRTPSAHTMEPEVFLYMGIHTDRYYF FT MEAVKNVFNFEKGNGFYADELVYDKEEKAVFQVTIYNDDYVDKRTVAMTAKPINREIED FT VTSLNAARLVEIYKKDQLKDGKLKEIASRLNEEDNPVIMLVKQKK" FT misc_feature 1181360..1181434 FT /note="Signal peptide predicted for BF0946 by SignalP 2.0 FT HMM (Signal peptide probability 0.846) with cleavage site FT probability 0.366 between residues 25 and 26" FT misc_feature 1181384..1181416 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(1182900..1184078) FT /transl_table=11 FT /locus_tag="BF9343_0908" FT /old_locus_tag="BF0947" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4331 SWALL:AAO79436 (EMBL:AE016944) FT (392 aa) fasta scores: E(): 9.1e-149, 93.87% id in 392 aa, FT and to Shewanella oneidensis conserved hypothetical protein FT so1149 SWALL:Q8EHR8 (EMBL:AE015559) (396 aa) fasta scores: FT E(): 2.8e-50, 40.3% id in 397 aa, and to Ralstonia FT solanacearum hypothetical protein RSC0051 or RS01874 FT SWALL:Q8Y3C9 (EMBL:AL646057) (397 aa) fasta scores: E(): FT 2.8e-50, 40.79% id in 402 aa, and to Vibrio FT parahaemolyticus putative SAM-dependent methyltransferase FT vp1629 SWALL:BAC59892 (EMBL:AP005078) (418 aa) fasta FT scores: E(): 3.9e-50, 39.64% id in 396 aa" FT /db_xref="GOA:Q5LGP9" FT /db_xref="InterPro:IPR002478" FT /db_xref="InterPro:IPR015947" FT /db_xref="InterPro:IPR019614" FT /db_xref="UniProtKB/TrEMBL:Q5LGP9" FT /protein_id="CAH06689.1" FT /translation="MHKVYLKPGKEDSLKRFHPWIFSGAIAHFDGEPEEGEVVEVYTSK FT KEFIAKGHFQIGSIAVRVLSFKQEEINHDFWKHKLEVAYDMRRSIGIATNPTNNTYRLV FT HGEGDNLPGLVIDVYARTAVMQAHSAGMHVDRMAIAEALSEVMGDQIENIYYKSETTLP FT FKADLFPENGFLKGGSSDNIAQEYGLKFHVDWLKGQKTGFFVDQRENRALLERYAKGRS FT VLNMFCYTGGFSFYAMRGGAKQVHSVDSSAKAIDLTNKNVELNFPGDTRHAAFAEDAFK FT YLDRMGDQYDLIILDPPAFAKHKDALRNALQGYRKLNAKAFEKIKPGGILFTFSCSQVV FT TKDNFRTAVFTAAAMSGRSVRILHQLTQPADHPVNIYHPEGEYLKGLVLYVE" FT CDS complement(1184103..1184753) FT /transl_table=11 FT /locus_tag="BF9343_0909" FT /old_locus_tag="BF0948" FT /product="putative 3'-5' exonuclease" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4332 SWALL:AAO79437 (EMBL:AE016944) FT (216 aa) fasta scores: E(): 2.1e-68, 81.81% id in 209 aa, FT and to Xenopus laevis Werner syndrome helicase homolog FT Ffa-1 SWALL:WRN_XENLA (SWALL:O93530) (1436 aa) fasta FT scores: E(): 2.9e-11, 35.17% id in 199 aa, and to FT Shewanella oneidensis exonuclease, putative so1153 FT SWALL:Q8EHR4 (EMBL:AE015559) (261 aa) fasta scores: E(): FT 1.3e-10, 27.27% id in 198 aa" FT /db_xref="GOA:Q5LGP8" FT /db_xref="InterPro:IPR002562" FT /db_xref="InterPro:IPR012337" FT /db_xref="UniProtKB/TrEMBL:Q5LGP8" FT /protein_id="CAH06690.1" FT /translation="MILKRTISKEEVKEMPKAAFPGRIHVIQTESEAQKAVAYLQSQAI FT LGIDSETRPSFTKGHSHKVALLQISSDECCFLFRLNMTGLTQPIIELLEDPKVIKVGLS FT LKDDFMMLHKRAPFNQQACIELQEYVRPFGIQDKSLQKIYGILFSEKISKSQRLSNWEA FT DVLTDAQKQYAATDAWACLNIYHLLEELKRTGNYELAPEEEATEKVKVGSDQQ" FT misc_feature complement(1184178..1184702) FT /note="Pfam match to entry PF01612 3_5_exonuclease, 3'-5' FT exonuclease, score 42.8, E-value 6.6e-10" FT CDS complement(1184760..1185395) FT /transl_table=11 FT /locus_tag="BF9343_0910" FT /old_locus_tag="BF0949" FT /product="conserved hypothetical protein, possible FT C-terminal metal binding site" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4333 SWALL:AAO79438 (EMBL:AE016944) (219 aa) FT fasta scores: E(): 1.3e-62, 75.79% id in 219 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGP7" FT /protein_id="CAH06691.1" FT /translation="MKKESQVIFDKNVIEFVTVAAEFCAFLERAESMKRSTFVDTTLKI FT LPLLYLKASMLPKCEMIGDESPETYVTEEIYEVLRINLASILAEKDDYLEVFLPDMAYS FT DEPIKKNISEDLADIYQDIKDFIFVFQLGLNETMNDSLAICQENFGLLWGQKLVNTMRA FT LHDVKYSPKARGEDEEEEEYEPENNEDCHCEDDDCHCHDHGCHCHDDE" FT CDS 1185508..1187997 FT /transl_table=11 FT /locus_tag="BF9343_0911" FT /old_locus_tag="BF0950" FT /product="putative FtsK/SpoIIIE-like protein" FT /note="Similar to Bacillus subtilis stage III sporulation FT protein E SpoIIIE from codon 158 SWALL:SP3E_BACSU FT (SWALL:P21458) (787 aa) fasta scores: E(): 2.8e-59, 38.29% FT id in 679 aa, and to entire Bacteroides thetaiotaomicron FT FtsK/SpoIIIE family protein BT4334 SWALL:AAO79439 FT (EMBL:AE016944) (831 aa) fasta scores: E(): 0, 81.51% id in FT 833 aa, and to Chlorobium tepidum FtsK/SpoIIIE family FT protein CT1787 SWALL:Q8KBK0 (EMBL:AE012931) (804 aa) fasta FT scores: E(): 1.4e-86, 39.41% id in 789 aa" FT /db_xref="GOA:Q5LGP6" FT /db_xref="InterPro:IPR002543" FT /db_xref="InterPro:IPR018541" FT /db_xref="UniProtKB/TrEMBL:Q5LGP6" FT /protein_id="CAH06692.1" FT /translation="MAKKKSDKEAEQKPASTKKYVAFFRNETIHFVIGLVLVIFSVYLL FT LAFTSFFFTGAADQSIIDSGNAQDLAAVNNHVKNYAGSRGAQLASYLINDCFGVSSFFI FT LIYLAVAGLKLMRVRVVRLWKWFIGCSLLLIWFSVFLGFVFMDHYQDSFIYLGGLHGYN FT ISNWLISQVGIPGVWLILLATGICFLIYMSARTIIWLRKLFSLSFLKRKQKEEFAEVTQ FT APQPHEYDNPKPQEVEFDVNRTFRQEVPVKKVETTVVPETPVESSTEMPVTPEDRDVTS FT DGDVTMTFEQTAPDPVSPFRAASADKEPEFEIEPAADDENYQGAETEPYNPKLDLENYH FT FPTIDLMKHYENSEPTINMEEQNANKDRIINTLRSFGIEISTIKATVGPTVTLYEITPE FT QGVRISKIRGLEDDIALSLSALGIRIIAPIPGKGTIGIEVPNSNPKIVSGQSIIGSKKF FT QESTYDLPIALGKTITNEVFMVDLCKMPHVLVAGATGQGKSVGLNAIITSLLYKKHPAE FT LKFVLVDPKKVEFSIYSVIEHHFLAKLPDGEDAIITDVTKVVQTLNSVCVEMDSRYDLL FT KMAHVRNIKEYNEKFINRRLNPEKGHKFMPYIVVVIDEFGDLIMTAGKEIELPIARIAQ FT LARAVGIHMIIATQRPTTNIITGTIKANFPARIAFRVSAMMDSRTILDRPGANQLIGRG FT DMLFLQGADPVRVQCAFIDTPEVEEITKYISRQQGYPTAFFLPEYVSEDSGSDLGEVDM FT GRLDPLFEEAARLIVIHQQGSTSLIQRKFSIGYNRAGRLMDQLEKAGIVGPSQGSKARD FT VLCVDENDLEMRLNNIQ" FT misc_feature order(1185604..1185666,1185793..1185855,1185883..1185943, FT 1186027..1186089) FT /note="4 probable transmembrane helices predicted for FT BF0950 by TopPred (bioweb.pasteur.fr) at aa 33-53, 96-116, FT 126-146 and 174-194" FT misc_feature 1186849..1187466 FT /note="Pfam match to entry PF01580 FtsK_SpoIIIE, FT FtsK/SpoIIIE family, score 191.7, E-value 9.7e-55" FT misc_feature 1186981..1187004 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 1188013..1188663 FT /transl_table=11 FT /locus_tag="BF9343_0912" FT /old_locus_tag="BF0951" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4335 SWALL:AAO79440 (EMBL:AE016944) FT (215 aa) fasta scores: E(): 2.2e-48, 59.53% id in 215 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGP5" FT /protein_id="CAH06693.1" FT /translation="MYTMKQIIISIWIALLTLPVFAQQQMQAKVVLDKTAATFEKAGGI FT RAEFNVTVFNKSRMAGQSAGVIELKGEKFVLKTDDGITWFDGKTQWSYLRSSDEVNISN FT PTGTELQGLNPYALLQIYRHGFDYKIGSLKNFGGKPVYEVVLTATDKKRDLSRIVLYVS FT KETYQPLFIMMEQRDKSRSEITVTGYQTGLKYADGMFVFDKKQYPHAEVIDLR" FT misc_feature 1188013..1188078 FT /note="Signal peptide predicted for BF0951 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.981 between residues 22 and 23" FT misc_feature 1188031..1188084 FT /note="1 probable transmembrane helix predicted for BF0951 FT by TMHMM2.0 at aa 7-24" FT CDS 1188719..1189666 FT /transl_table=11 FT /gene="trxB" FT /locus_tag="BF9343_0913" FT /old_locus_tag="BF0952" FT /product="putative thioredoxin reductase" FT /EC_number="1.8.1.9" FT /note="Similar to Mycobacterium tuberculosis thioredoxin FT reductase TrxB or Rv3913 or MT4032 or MTV028.04 FT SWALL:TRXB_MYCTU (SWALL:P52214) (335 aa) fasta scores: E(): FT 8.3e-53, 50.32% id in 304 aa, and to Bacteroides FT thetaiotaomicron thioredoxin reductase BT4336 FT SWALL:AAO79441 (EMBL:AE016944) (316 aa) fasta scores: E(): FT 1.6e-109, 90.12% id in 314 aa, and to Chlorobium tepidum FT thioredoxin reductase TrxB or CT0842 SWALL:Q8KE48 FT (EMBL:AE012852) (311 aa) fasta scores: E(): 5.4e-57, 54.93% FT id in 304 aa" FT /db_xref="GOA:Q5LGP4" FT /db_xref="InterPro:IPR000103" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR005982" FT /db_xref="InterPro:IPR008255" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:Q5LGP4" FT /protein_id="CAH06694.1" FT /translation="METERIKCLIIGSGPAGYTAAIYAGRANLSPVLYEGIQPGGQLTT FT TTDVENFPGYPQGISGPQLMEDLRTQAERFGADIRFGIATASDLGQAPYKITIDGEKVI FT EADSLIIATGATAKYLGLDDEKKYAGMGVSACATCDGFFYRKKVVAVVGGGDTACEEAI FT YLAGLASKVYLVVRKPYLRASKIMQERVRKHDKIEVLFEHNVVGLFGENGVEGMNLVKR FT WEEPDEERYSLPIDGFFLAIGHKPNSDIFKPYLDTDEVGYITTDGDSPRTKVPGVFAAG FT DVADPHYRQAITAAGSGCKAAIEAERYLSEKGLI" FT misc_feature 1188737..1189597 FT /note="Pfam match to entry PF00070 pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase, score 232.3, E-value FT 6e-67" FT misc_feature 1189124..1189186 FT /note="PS00573 Pyridine nucleotide-disulphide FT oxidoreductases class-II active site." FT CDS complement(1189820..1192264) FT /transl_table=11 FT /locus_tag="BF9343_0914" FT /old_locus_tag="BF0953" FT /product="putative beta-N-acetylhexosaminidase" FT /note="Similar to previously sequenced Bacteroides fragilis FT beta-N-acetylhexosaminidase NahB SWALL:BAC56900 FT (EMBL:AB102772) (747 aa) fasta scores: E(): 9e-56, 36.98% FT id in 776 aa, and to Bacteroides thetaiotaomicron FT beta-hexosaminidase precursor BT4337 truncated at the FT N-terminus SWALL:AAO79442 (EMBL:AE016944) (844 aa) fasta FT scores: E(): 0, 68.79% id in 814 aa, and to Bacteroides FT thetaiotaomicron putative beta-N-acetyl glucosaminidase FT B-NagA truncated at the N-terminus SWALL:Q8VS76 FT (EMBL:AF391102) (729 aa) fasta scores: E(): 6.1e-209, FT 72.85% id in 689 aa" FT /db_xref="GOA:Q5LGP3" FT /db_xref="InterPro:IPR001540" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR015882" FT /db_xref="InterPro:IPR015883" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q5LGP3" FT /protein_id="CAH06695.1" FT /translation="MKKGITLFLLSLLFITPGCKQSKETIVNEYNIVPLPNQMIPQQGR FT FEISKKVRVITTACTPDVQIIADSLINRLKLTSGITIKQTFENVTDEPVIRFVPQDGMP FT EEGYKLSVTPQNITLTASTPKGFFYAVQTLYQLLPPVVYGNQKVKNAEWSVPAVEIEDA FT PRFAYRGLMLDVCRHFSPVEYVYKFIDMLAMHKMNTFHWHLTDDQGWRIEIKKYPKLTE FT IGSKRKETLVDYYYVNYPQVFDGKEHGGYYTQEQIKAIVDYAASKFITVIPEIEMPGHA FT IAAIASYPELSCTPDSTCDVTGTWGVFEQVFCPSDTTFQFLEGVMDEVMDLFPSKYIHI FT GGDECPKTAWINSEYCQSLIKQLGLKDDVTPNVIDGKKHTKEEKLQSYFITRMEKYLNN FT KGRNIIGWDEILEGGLAPNATVMSWRGVEGGLNAAKAGHNAIMTPNPYAYLDQYQEEPE FT IAPVTIGGYNTLKKTYSYNPVPDDANELVKKHIIGVQGNIWTEYMPGNDNRDYQAFPRA FT VAIAETGWTLNANKNWNNFCQRMVEDFRRMDVKNVKACRNFFDVNINTHVDETNTLKVV FT LESFYPNAEIHYTTNGSVPTVESAIYNQPFALSGEMDVKAAAFKDGKMLGKVSGKKLYG FT NLISGKSFTVTPPIGAAKGDILGENDVLGTDISTFGLTNGKRGNIASMTPWSGFRMNDA FT CNKLVFIVEFEQPTTVSKVVFGSLYNPASVILPPSVATVETSSDGRKYDKMAEASFKRN FT YPERGRKAFTDTLGFAPKEVKYIKITLQNGGTLRNGIDFVKDPNEKDVVQANIYLDEIE FT VY" FT misc_feature complement(1190339..1190362) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature complement(1190678..1191769) FT /note="Pfam match to entry PF00728 Glyco_hydro_20, Glycosyl FT hydrolase family 20, catalytic domain, score 202.9, E-value FT 4.3e-58" FT misc_feature complement(1191773..1192153) FT /note="Pfam match to entry PF02838 Glyco_hydro_20b, FT Glycosyl hydrolase family 20, domain 2, score -3.5, E-value FT 0.0011" FT misc_feature complement(1192199..1192264) FT /note="Signal peptide predicted for BF0953 by SignalP 2.0 FT HMM (Signal peptide probability 0.983) with cleavage site FT probability 0.635 between residues 22 and 23" FT CDS complement(1192309..1193010) FT /transl_table=11 FT /locus_tag="BF9343_0915" FT /old_locus_tag="BF0954" FT /product="putative FNR-family transcriptional regulator FT protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT regulator protein MalR or BT4338 SWALL:AAO79443 FT (EMBL:AF391102) (233 aa) fasta scores: E(): 7.4e-77, 84.12% FT id in 233 aa, and to Bacteroides thetaiotaomicron putative FT regulator protein MalR or BT4338 SWALL:Q8VS77 FT (EMBL:AF391102) (233 aa) fasta scores: E(): 7.4e-77, 84.12% FT id in 233 aa, and to Clostridium perfringens probable FT transcriptional regulator CPE0993 SWALL:Q8XLP8 FT (EMBL:AP003188) (236 aa) fasta scores: E(): 4.5e-12, 30.23% FT id in 215 aa" FT /db_xref="GOA:Q5LGP2" FT /db_xref="InterPro:IPR000595" FT /db_xref="InterPro:IPR001808" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR012318" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018490" FT /db_xref="UniProtKB/TrEMBL:Q5LGP2" FT /protein_id="CAH06696.1" FT /translation="MVKMNLSEINVPERIAEMWAPLNAEQREFLANNFTLQNYKKNETI FT YCEGESPTYLMCLLSGKVKIYKDGVGGRSQIIRMIKPTEYFGYRAYFAKEDYVTAASAF FT EPSTICLIPMSAIMTLVSQNNDLGMFFIRQLSIDLGIADERTVNLTQKHIRGRLAESLL FT FLKESYGLEEDGSTLSIYLSREDLANLSNMTTSNAIRTLSNFATERLITIDGRKIKIID FT EEKLKKISKIG" FT misc_feature complement(1192402..1192467) FT /note="Predicted helix-turn-helix motif with score FT 1024.000, SD 2.67 at aa 182-203, sequence FT LSREDLANLSNMTTSNAIRTLS" FT misc_feature complement(1192633..1192914) FT /note="Pfam match to entry PF00027 cNMP_binding, Cyclic FT nucleotide-binding domain, score 52.9, E-value 6e-13" FT CDS complement(1193352..1195541) FT /transl_table=11 FT /gene="glnA" FT /locus_tag="BF9343_0916" FT /old_locus_tag="BF0955" FT /product="glutamine synthetase" FT /note="Identical to Bacteroides fragilis glutamine FT synthetase GlnA SWALL:GLNA_BACFR (SWALL:P15623) (729 aa) FT fasta scores: E(): 0, 99.72% id in 729 aa, and similar to FT Bacteroides thetaiotaomicron glutamine synthetase BT4339 FT SWALL:AAO79444 (EMBL:AE016944) (729 aa) fasta scores: E(): FT 0, 92.73% id in 729 aa, and to Bacteroides thetaiotaomicron FT glutamine synthetase BT0543 SWALL:AAO75650 (EMBL:AE016928) FT (729 aa) fasta scores: E(): 6.1e-173, 60.08% id in 729 aa" FT /db_xref="GOA:Q5LGP1" FT /db_xref="InterPro:IPR008146" FT /db_xref="InterPro:IPR014746" FT /db_xref="InterPro:IPR022147" FT /db_xref="PDB:3O6X" FT /db_xref="UniProtKB/TrEMBL:Q5LGP1" FT /protein_id="CAH06697.1" FT /translation="MSKMRFFALQELSNRKPLEITTPSNKLSDYYASHVFDRKKMQEYL FT PKEAYKAVVDATEKGTPISREMADLIANGMKSWAKSLNVTHYTHWFQPLTDGTAEKHDG FT FIEFGEDGEVIERFSGKLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFVVDTTL FT CIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQLFDKNITRVFTNLGWEQEYFLVD FT TSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIPPRVTAFMKELEIECHKLGIPVK FT TRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSG FT KHNNWSLCTDTGINLFAPGKNPKGNMLFLTFLVNVLMMVHKNQDLLRASIMSAGNSHRL FT GANEAPPAILSIFLGSQLSATLDEIVRQVTNSKMTPEEKTTLKLGIGRIPEILLDTTDR FT NRTSPFAFTGNRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDKLMEEGIGKDEA FT IFRILKENIIASEPIRFEGDGYSEEWKQEAARRGLTNICHVPEALMHYMDNQSRAVLIG FT ERIFNETELACRLEVELEKYTMKVQIESRVLGDLAINHIVPIAVSYQNRLLENLCRMKE FT IFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYEETV FT RPYLESIRDHIDHLEMEIDDEIWPLPKYRELLFTK" FT misc_feature complement(1194108..1195016) FT /note="Pfam match to entry PF00120 gln-synt, Glutamine FT synthetase, catalytic domain, score 57.7, E-value 1.7e-15" FT misc_feature complement(1194504..1194551) FT /note="PS00181 Glutamine synthetase putative ATP-binding FT region signature." FT misc_feature 1195774..1195833 FT /note="1 probable transmembrane helix predicted for BF0956 FT by TMHMM2.0 at aa 48-67" FT CDS 1195844..1198000 FT /transl_table=11 FT /locus_tag="BF9343_0917" FT /old_locus_tag="BF0957" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4341 SWALL:AAO79446 (EMBL:AE016944) (719 aa) FT fasta scores: E(): 2.2e-138, 68.66% id in 718 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT3881 FT SWALL:AAO78986 (EMBL:AE016942) (390 aa) fasta scores: E(): FT 5.2e-18, 26.41% id in 371 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGP0" FT /protein_id="CAH06698.1" FT /translation="MANVVLDPQTNRPISADSILNNVMTFAPFYEKLVTDYRADLYIKG FT TMDIKRKNFILRYVPSMFRLQKGVRQYMVETYSDLHFTAPNIYDQKVKASMGTVHNSRG FT VPGMLEYFNINLYSSTLLYDRLLSPLAKNGRKYYKYLIDSIMGGTDNRQYKIRFIPRSK FT SDQLVGGYMIVSSDVWSVREIRFSGRSELLLFSCLIKMGSVGKDDEFLPVSYNVEGQFN FT FLGNRINGVYVASLNYHDIVLEENQNKWKEKVRARIKGKSKYDLSDSYNLQCETTSFHT FT DSAYFETLRPIPLSEAERRLYKEDALRKDTIQRNIKPKSKSQVFWGQVGDVLISDYKLN FT LSNLGSVKCSPLINPFLLSYSGSNGLSYRQSFKYNRLFKHDRLLRVVPKLGYNFTRKEF FT YWSVNTEFNYLPEKMGAVHIDFGNGNRIYSSDVLDDLKAIPDSVFDFNQIHLDYFYDLY FT FNFRHSIEIINGLELSVGLSTHRRKAVKSSKLVPLTKSRETLNEDIQNKIRNTYLSFAP FT RVRLEWTPCLYYYMNGHRKINLRSKYPTFSIDWERGIKGVFGSTGQYERLEFDLQHHIP FT LGLMRNIYYRFGFGMFTNQKEMYFVDFNNFTRSNLPEGWNDEIGGVFQLLDRRWYNASR FT KYIRGHFTYEAPFLLLKHLIKYTRYVQNERLYASILSVPHLQPYVELGYGIGTHIFDFG FT VFVGSENWKYTEVGCKFTFELFNR" FT CDS 1198207..1199319 FT /transl_table=11 FT /locus_tag="BF9343_0918" FT /old_locus_tag="BF0958" FT /product="putative reverse transcriptase" FT /note="Similar to Escherichia coli reverse transcriptase Rt FT SWALL:Q05804 (EMBL:X62583) (319 aa) fasta scores: E(): FT 1.9e-26, 30.19% id in 308 aa, and to Bacteroides FT thetaiotaomicron RNA-directed DNA polymerase BT4342 FT SWALL:AAO79447 (EMBL:AE016944) (377 aa) fasta scores: E(): FT 5.3e-85, 57.86% id in 375 aa, and to Methanosarcina FT acetivorans hypothetical protein Ma2102 SWALL:Q8TP23 FT (EMBL:AE010896) (563 aa) fasta scores: E(): 4.9e-30, 34.29% FT id in 312 aa" FT /db_xref="GOA:Q5LGN9" FT /db_xref="InterPro:IPR000123" FT /db_xref="InterPro:IPR000477" FT /db_xref="UniProtKB/TrEMBL:Q5LGN9" FT /protein_id="CAH06699.1" FT /translation="MELLLGIVIVVTCWMVVRIIRSSKNQEGYKRWRAGNYASENPYAK FT EKASGPLSQGLFSKRVRTTGVRRFDDGAIRWCANLLATEESRLREVLDYIPRQYTCFHV FT RKRSGGFRYISAPAGDFRSMQQTIYHRILLLANIHPAVTGFCPGKSVSDNARVHLGRKN FT VLKVDLHDFFPSIRSPRVRAAFREMGYSRPIAKVLAELCCLRCCLPQGAPTSPALSNII FT AYPMDKKMMALAGEYGLVYTRYADDLTFSGDYLPKDEVLVRIHRIIREEGFTMNVKKTR FT FLSEHKRKIITGVSVSSGKKMTLPKVKKREIRKNVHYVLTKGLVGHQEHIGSTDPVYLK FT RLLGSLCYWRSIEPDNRYVSDSITALKRLM" FT misc_feature 1198489..1199094 FT /note="Pfam match to entry PF00078 rvt, Reverse FT transcriptase (RNA-dependent DNA polymerase), score 87.9, FT E-value 1.7e-23" FT CDS 1199461..1201254 FT /transl_table=11 FT /gene="rpsA" FT /gene_synonym="ssyF" FT /locus_tag="BF9343_0919" FT /old_locus_tag="BF0959" FT /product="putative 30S ribosomal protein S1" FT /note="Similar to Escherichia coli, Escherichia coli O6, FT Escherichia coli O157:H7, and Shigella flexneri 30S FT ribosomal protein S1 RpsA or SsyF or B0911 or C1049 or FT z1257 or ECS0994 or SF0907 or s0971 SWALL:RS1_ECOLI FT (SWALL:P02349) (557 aa) fasta scores: E(): 8.7e-68, 37.11% FT id in 555 aa, and to Bacteroides thetaiotaomicron 30S FT ribosomal protein S1 BT4345 SWALL:AAO79450 (EMBL:AE016944) FT (599 aa) fasta scores: E(): 2.9e-209, 97.16% id in 599 aa, FT and to Porphyromonas gingivalis heme uptake protein A and B FT SWALL:Q9X6Q9 (EMBL:AF143945) (599 aa) fasta scores: E(): FT 1.7e-174, 78.52% id in 596 aa" FT /db_xref="GOA:Q5LGN8" FT /db_xref="InterPro:IPR000110" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR022967" FT /db_xref="UniProtKB/TrEMBL:Q5LGN8" FT /protein_id="CAH06700.1" FT /translation="MENLKNVAPIEDFNWDAYENGESFAGASHEELEKAYDGTLNKVND FT REVVDGTVIAMNKREVVVNIGYKSDGIIPLNEFRYNPDLKVGDTVEVYIENQEDKKGQL FT VLSHRKARATRSWDRVNAALENEEIIKGYIKCRTKGGMIVDVFGIEAFLPGSQIDVKPI FT RDYDVFVGKTMEFKVVKINQEFKNVVVSHKALIEAELEQQKKEIIGKLEKGQVLEGTVK FT NITSYGVFIDLGGVDGLIHITDLSWGRVSDPKEVVELDQKLNVVILDFDDEKKRIALGL FT KQLTPHPWDALDPNLQVGDKVKGKVVVMADYGAFIEIAPGVEGLIHVSEMSWSQHLRSA FT QDFMKVGDEVEAVVLTLDREERKMSLGIKQLKQDPWETIEEKYPVGSKHTAKVRNFTNF FT GVFVEIEEGVDGLIHISDLSWTKKVKHPSEFTQIGADIEVQVLEIDKENRRLSLGHKQL FT EENPWDVFETVFTVGSVHEGTIIEMLDKGAVVALPYGVEGFATPKHLVKEDGSQAQMDE FT KLEFKVIEFNKDAKRIILSHSRIFEDVAKAEERAEKKAASNAKKSSKREETPAIQNQAA FT STTLGDIDALAALKEQLEGKK" FT misc_feature 1199584..1199787 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 46.4, E-value 5.3e-11" FT misc_feature 1199827..1200039 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 51.9, E-value 1.2e-12" FT misc_feature 1200088..1200306 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 93.1, E-value 4.8e-25" FT misc_feature 1200343..1200567 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 77.2, E-value 2.9e-20" FT misc_feature 1200604..1200828 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 94.5, E-value 1.7e-25" FT misc_feature 1200865..1201074 FT /note="Pfam match to entry PF00575 S1, S1 RNA binding FT domain, score 42.9, E-value 6.3e-10" FT CDS 1201404..1202318 FT /transl_table=11 FT /locus_tag="BF9343_0920" FT /old_locus_tag="BF0960" FT /product="conserved hypothetical protein" FT /note="Similar to Escherichia coli, and Shigella flexneri FT protein ElaC or B2268 or SF2347 or s2481 SWALL:ELAC_ECOLI FT (SWALL:Q47012) (305 aa) fasta scores: E(): 1.6e-25, 32.22% FT id in 301 aa, and to Bacteroides thetaiotaomicron conserved FT hypothetical protein, with a metallo-beta-lactamase FT superfamily domain BT4346 SWALL:AAO79451 (EMBL:AE016944) FT (316 aa) fasta scores: E(): 1.4e-110, 82.56% id in 304 aa, FT and to Porphyromonas gingivalis hypothetical 33.6 kDa FT protein in RnhB-PgaA intergenic region SWALL:YPGA_PORGI FT (SWALL:Q51834) (297 aa) fasta scores: E(): 8.3e-71, 57.49% FT id in 287 aa" FT /db_xref="GOA:Q5LGN7" FT /db_xref="InterPro:IPR013471" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGN7" FT /protein_id="CAH06701.1" FT /translation="MEKFELHILGCGSALPTTRHFATSQVVNLRDKLFMIDCGEGAQMQ FT LRKSRLKFSRLNHIFISHLHGDHCFGLMGLISTFGLLGRTAELHIHSPKGLEELLTPML FT NFFCHTLAYKVIFHEFDTRQTSVVYEDRSMTVTTIPLQHRIPCCGFLFAEKARPNHIIR FT DMVDFYKVPVYELNRIKNGSDYVTPEGEVIANTRLTRPSDPPRKYAYCSDTIFRPEIVK FT QLSGVDLLFHEATFAESELARAKETYHTTAAQAARIALEAGVRQLVIGHFSARYEDESI FT LLKEASAVFPNTILAKENLCISL" FT misc_feature 1201464..1202216 FT /note="Pfam match to entry PF00753 lactamase_B, FT Metallo-beta-lactamase superfamily, score 45.0, E-value FT 1.5e-10" FT misc_feature 1202049..1202123 FT /note="PS00179 Aminoacyl-transfer RNA synthetases class-II FT signature 1." FT CDS 1202391..1202942 FT /transl_table=11 FT /locus_tag="BF9343_0921" FT /old_locus_tag="BF0961" FT /product="putative RNA polymerase ECF-type sigma factor" FT /note="Similar to Bacillus subtilis RNA polymerase sigma FT factor SigW SWALL:SIGW_BACSU (SWALL:Q45585) (187 aa) fasta FT scores: E(): 5.1e-11, 30.68% id in 176 aa, and to FT Bacteroides thetaiotaomicron RNA polymerase ECF-type sigma FT factor BT4347 SWALL:AAO79452 (EMBL:AE016944) (183 aa) fasta FT scores: E(): 9.8e-63, 86.88% id in 183 aa, and to FT Bacteroides thetaiotaomicron RNA polymerase ECF-type sigma FT factor BT4647 SWALL:AAO79752 (EMBL:AE016946) (178 aa) fasta FT scores: E(): 2.6e-24, 40.9% id in 176 aa" FT /db_xref="GOA:Q5LGN6" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="UniProtKB/TrEMBL:Q5LGN6" FT /protein_id="CAH06702.1" FT /translation="MNPYNEREVLALLQDERTQKQGFERIVSQYSEQLYWQIRRMVLSH FT DDANDLLQNTFIKAWINIDYFRAEAKLSTWLYRIALNECITFLNKQRAMNTVAIDDPEA FT DVTQKLESDPYFSGDRAELLLQKALLTLPEKQRMVFNLKYYQEMKYEEMSEIFGTSVGA FT LKASYHHAVKKIEKFLEEAN" FT misc_feature 1202466..1202672 FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 64.8, E-value 1.5e-16" FT CDS 1202960..1203373 FT /transl_table=11 FT /locus_tag="BF9343_0922" FT /old_locus_tag="BF0962" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4348 SWALL:AAO79453 (EMBL:AE016944) (128 aa) FT fasta scores: E(): 1.4e-29, 70.54% id in 129 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGN5" FT /protein_id="CAH06703.1" FT /translation="MSKKKRGEERMKEEDNILKKVGKKNSFKVPEGYFENLTSEVMGKL FT PEKEGPAFEEVKQPTMWIRMKPLLYMAAMFIGAALIIRVASSNHQPTTAGDHLTANEAA FT TEVVSDEYIDVALDRSMLDDYSLYVYLSDATAE" FT misc_feature 1203158..1203217 FT /note="1 probable transmembrane helix predicted for BF0962 FT by TMHMM2.0 at aa 67-86" FT CDS 1203402..1203875 FT /transl_table=11 FT /locus_tag="BF9343_0923" FT /old_locus_tag="BF0963" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4349 SWALL:AAO79454 (EMBL:AE016944) (155 aa) FT fasta scores: E(): 7.6e-36, 64.1% id in 156 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGN4" FT /protein_id="CAH06704.1" FT /translation="MKKLIILLIIVCSFTPALRAVGSPNQHLSPKEFRAKQQAFITEKA FT GLTQEEAAKFFPVYFELQDRKKQLNDEAWKLLRSGKDEKTTDTQYGEILEGVYDARIAS FT DRLDKTYFEKFKKILSCKKIYLVQRAEMRFHRELLKGVRDNKGGNERPQGKRK" FT misc_feature 1203402..1203458 FT /note="Signal peptide predicted for BF0963 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.476 between residues 19 and 20" FT CDS complement(1203978..1204763) FT /transl_table=11 FT /locus_tag="BF9343_0924" FT /old_locus_tag="BF0964" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4350 SWALL:AAO79455 (EMBL:AE016944) FT (262 aa) fasta scores: E(): 1.4e-95, 95.78% id in 261 aa, FT and to Bacillus subtilis hypothetical protein YabN FT SWALL:YABN_BACSU (SWALL:P37556) (489 aa) fasta scores: E(): FT 3.1e-41, 47.12% id in 261 aa, and to Clostridium FT perfringens hypothetical protein CPE2480 SWALL:Q8XHK3 FT (EMBL:AP003194) (483 aa) fasta scores: E(): 1.3e-39, 47.43% FT id in 253 aa" FT /db_xref="InterPro:IPR004518" FT /db_xref="InterPro:IPR011551" FT /db_xref="UniProtKB/TrEMBL:Q5LGN3" FT /protein_id="CAH06705.1" FT /translation="MHTREEQMEAFGRFLDILDELRVKCPWDRKQTNESLRPNTIEETY FT ELCDALMRNDKKDICKELGDVLLHVAFYAKIGSETGDFDMKDVCDKLCEKLIFRHPHVF FT GEVKAETAGQVSENWEQLKLKEKDGNKSVLSGVPAALPSLIKAYRIQDKARNVGFDWEE FT REQVWDKVKEEIAEFQVEVANMDKDKAEAEFGDVMFSLINAARLYKINPDNALERTNQK FT FIRRFNYLEDHTIKEGKNLKDMSLDEMDAIWNEAKKKGL" FT misc_feature complement(1204071..1204715) FT /note="Pfam match to entry PF03819 MazG, MazG family FT protein, score 348.4, E-value 6.7e-102" FT CDS complement(1204769..1205830) FT /transl_table=11 FT /locus_tag="BF9343_0925" FT /old_locus_tag="BF0965" FT /product="putative transmembrane zinc-binding protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4351 SWALL:AAO79456 (EMBL:AE016944) (355 aa) FT fasta scores: E(): 6.5e-107, 75.21% id in 351 aa" FT /db_xref="GOA:Q5LGN2" FT /db_xref="InterPro:IPR024294" FT /db_xref="UniProtKB/TrEMBL:Q5LGN2" FT /protein_id="CAH06706.1" FT /translation="MKNRKRIIRYSVLGTLIALVWLTQMLPALGEGYARTAYPVISYIL FT SGFSNIIPFALGDLFIALSIGGMIAYPFYARIRLKLSWKKILRRDVEYLLWIYVWFYLA FT WGLNYSQKNFYERTGIPYTAYTPEIFNEFVDNYISKLNESYVPVNRIDKEVIRKEAVRQ FT YNLISDTLGIHRPPHSRPRVKTMMFTPLISMVGVTGSMGPFFCEFTLNGDLLPPQYPAT FT YTHELAHLLGITSEAEANFYAYQVCTRSVNKEIRFSGYFSILGHVLANARQLMTEEEYK FT KLFGSIRPEIIELARKDQEYWMAKYSPLIGDIQDWIYDLYLKGNKIESGRKNYSEVIGL FT LISYNEWKKESNK" FT misc_feature complement(1205138..1205167) FT /note="PS00142 Neutral zinc metallopeptidases, zinc-binding FT region signature." FT misc_feature complement(order(1205501..1205554,1205612..1205680, FT 1205744..1205812)) FT /note="3 probable transmembrane helices predicted for FT BF0965 by TMHMM2.0 at aa 7-29, 51-73 and 93-110" FT misc_feature complement(1205741..1205830) FT /note="Signal peptide predicted for BF0965 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.980 between residues 30 and 31" FT CDS 1205947..1208577 FT /transl_table=11 FT /gene="valS" FT /locus_tag="BF9343_0926" FT /old_locus_tag="BF0966" FT /product="putative valyl-tRNA synthetase" FT /EC_number="6.1.1.9" FT /note="Similar to Thermus thermophilus valyl-tRNA FT synthetase ValS SWALL:SYV_THETH (SWALL:P96142) (862 aa) FT fasta scores: E(): 2.9e-114, 39.13% id in 879 aa, and to FT Bacteroides thetaiotaomicron valyl-tRNA synthetase BT4353 FT SWALL:AAO79458 (EMBL:AE016944) (879 aa) fasta scores: E(): FT 0, 85.42% id in 878 aa, and to Fusobacterium nucleatum FT valyl-tRNA synthetase Fn2011 SWALL:Q8RHK3 (EMBL:AE010503) FT (887 aa) fasta scores: E(): 1.1e-147, 46.03% id in 895 aa" FT /db_xref="GOA:Q5LGN1" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002300" FT /db_xref="InterPro:IPR002303" FT /db_xref="InterPro:IPR009008" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR010978" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR019499" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGN1" FT /protein_id="CAH06707.1" FT /translation="MELASKYNPADVEGKWYQYWLDHKLFSSKPDGREPYTIVIPPPNV FT TGVLHMGHMLNNTIQDILVRRARMEGKNACWVPGTDHASIATEAKVVNKLAAQGIKKTD FT LSRDEFLKHAWAWTDEHGGIILKQLRKLGASCDWDRTAFTMDEKRSESVLKVFVDLYNK FT GLIYRGVRMVNWDPKALTALSDEEVIYKEEHGKLFYLRYKIEGEDGYAVVATTRPETIM FT GDTAMCINPNDPKNQHLKGKKVIVPLVGRVIPVIEDDYVDIEFGTGCLKVTPAHDVNDY FT MLGEKYNLPSIDIFNDNGTISEAAGMYIGMDRFDVRKQIEKDLEAAGLLEKTEAYTNKV FT GYSERTNVVIEPKLSMQWFLKMEHLAQIALEPVMKDDIKFYPAKYKNTYRHWMENIKDW FT CISRQLWWGHRIPAYFLPEGGYVVAVTDEEALKLAREKTGNPNLKMTDLRQDEDCLDTW FT FSSWLWPISLFDGINNPGNEEINYYYPTSDLVTGPDIIFFWVARMIMAGYEYEGKMPFK FT NVYFTGIVRDKLGRKMSKSLGNSPDPLELIEKYGADGVRMGMMLSAPAGNDILFDDALC FT EQGRNFCNKIWNAFRLVKGWENGMGTIDIPADAHLAVQWFDQRLDAAAVEVADLFSKYR FT LSEALMLIYKLFWDEFSSWLLEIVKPAYGQPVNGFIYSMTLSAFERLLAMLHPFMPFIT FT EELWQQLREREPGASLMVQPLGEPGEVNEEFLQQFETAKEIISSVRTIRLQKNIALKEP FT LELQVVGANPVEKMNPVIRKMCNLSAIEVVDAKADGASSFMIGTTEFAVPLGNMIDVDA FT EIARMEAELKHKEGFLQGVLKKLSNEKFVNNAPAAVIEMERKKQADAESIIQSLKESIA FT SLKNV" FT misc_feature 1205989..1207662 FT /note="Pfam match to entry PF00133 tRNA-synt_1, tRNA FT synthetases class I (I, L, M and V), score 695.8, E-value FT 1.8e-206" FT misc_feature 1206073..1206108 FT /note="PS00178 Aminoacyl-transfer RNA synthetases class-I FT signature." FT misc_feature 1207972..1208001 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT CDS 1208696..1210597 FT /transl_table=11 FT /locus_tag="BF9343_0927" FT /old_locus_tag="BF0967" FT /product="putative two-component sensor histidine kinase" FT /note="Similar to Bacteroides thetaiotaomicron FT two-component system sensor histidine kinase BT4354 FT SWALL:AAO79459 (EMBL:AE016944) (631 aa) fasta scores: E(): FT 3.7e-170, 66.29% id in 629 aa, and to Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase BT1264 SWALL:AAO76371 (EMBL:AE016931) (1039 aa) FT fasta scores: E(): 5.9e-49, 53.9% id in 256 aa, and to FT Bacteroides thetaiotaomicron two-component system sensor FT histidine kinase BT1833 SWALL:AAO76940 (EMBL:AE016933) (882 FT aa) fasta scores: E(): 3.4e-47, 55.46% id in 247 aa. This FT CDS overlaps 31 nucleotides at the C-terminus with the FT adjacent CDS" FT /db_xref="GOA:Q5LGN0" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR009082" FT /db_xref="UniProtKB/TrEMBL:Q5LGN0" FT /protein_id="CAH06708.1" FT /translation="MKQTPFRCLCLLLILLGAVHSRLSAHTDKTREDVLFLNSINFNLP FT WAKDVFWYTHQALQKKNISVKAESLSVPALCNRKEAAAVVEQLRRKYDVPPRLIVFIGD FT PGWIVCRELFDDVWKDVPVIITNTRDRLPATLDILLSHEELTESNTVPAYEWRKGYNVT FT TLGQVYYVKETIGLMRQLMPDMKRLAFISDDRYISEAVRGDVEQAMTGSFPELAFEQLS FT TRNISTEMLLDTLKSYDKTTGLIYYSWFETHNQDDNNYLFDHIQEIITRFVHSPLFLLA FT PEDLSNNTFAGGYYVSVESFGDSLLQLIHRVLEGEFPRDIPPALGGKPAAYLCYPALQS FT YDIPVSLYPKEAVYINLPVSFFEQYKKEILMTVVLLLVVVSAVGYYIHILKRAHQRMKE FT AQLKAEEANQLKSAFLANMSHEIRTPLNAIVGFSNLLSMVEDKEEMLEYAGIIETNTEL FT LLQLINDILDMSKIESGMYDFHVTQVDANQLMSEVEQVARLRIRTDEVSLSFAERLPQC FT VFHTDKNRLIQVLTNLVVNAIKFTSQGEIQIGYRLQDAHTLYFYVSDTGCGMSAEQCEH FT VFERFVKYNTFIQGTGLGLSICKMIIEKLGGEIGVQSESGKGSVFWFTLPYRASASL" FT misc_feature 1208696..1208770 FT /note="Signal peptide predicted for BF0967 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.665 between residues 25 and 26" FT misc_feature 1209797..1209865 FT /note="1 probable transmembrane helix predicted for BF0967 FT by TMHMM2.0 at aa 368-390" FT misc_feature 1209923..1210120 FT /note="Pfam match to entry PF00512 HisKA, His Kinase A FT (phosphoacceptor) domain, score 85.0, E-value 1.3e-22" FT misc_feature 1210256..1210579 FT /note="Pfam match to entry PF02518 HATPase_c, Histidine FT kinase-, DNA gyrase B-, and HSP90-like ATPase, score 137.7, FT E-value 1.8e-38" FT CDS complement(1210566..1210991) FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0928" FT /old_locus_tag="BF0968" FT /product="conserved hypothetical protein (pseudogene)" FT /note="Pseudogene. Similar to Bacteroides thetaiotaomicron FT conserved hypothetical protein BT3610 SWALL:AAO78715 FT (EMBL:AE016941) (156 aa) fasta scores: E(): 9.1e-13, 39.85% FT id in 133 aa, and to Bacteroides thetaiotaomicron putative FT DNA-binding protein BT0281 but truncated at the C-terminus FT SWALL:AAO75388 (EMBL:AE016927) (213 aa) fasta scores: E(): FT 1.8e-06, 29.54% id in 132 aa, and to Bacteroides FT thetaiotaomicron conserved hypothetical protein BT1517 but FT truncated at the C-terminus SWALL:AAO76624 (EMBL:AE016932) FT (176 aa) fasta scores: E(): 2.1e-05, 33.02% id in 109 aa. FT Note: This potential CDS overlaps 31 nucleotides at the FT C-terminus with the adjacent CDS and is situated between a FT putative two-component histidine kinase sensor protein and FT a putative two-component response regulator protein" FT CDS complement(1211201..1211803) FT /transl_table=11 FT /locus_tag="BF9343_0929" FT /old_locus_tag="BF0969" FT /product="putative RNA polymerase ECF-type sigma factor" FT /note="Similar to Bacteroides fragilis fragilis regulatory FT region RpoE SWALL:Q8VTB1 (EMBL:AF329100) (187 aa) fasta FT scores: E(): 2.7e-07, 25.54% id in 184 aa, and to FT Bacteroides thetaiotaomicron RNA polymerase ECF-type sigma FT factor BT4355 SWALL:AAO79460 (EMBL:AE016944) (191 aa) fasta FT scores: E(): 7.2e-31, 49.46% id in 186 aa, and to FT Bacteroides thetaiotaomicron RNA polymerase ECF-type sigma FT factor BT1053 SWALL:AAO76160 (EMBL:AE016930) (202 aa) fasta FT scores: E(): 5.6e-24, 38.69% id in 199 aa" FT /db_xref="GOA:Q5LGM9" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="InterPro:IPR014327" FT /db_xref="UniProtKB/TrEMBL:Q5LGM9" FT /protein_id="CAH06710.1" FT /translation="MPKTKVYMYNDTSRTVSDETLFFQVQQGNEGAFEALFLRHYPALC FT AYARLFVEPDDGQEIVSDVMVWLWENKEMQAFESSLKSYLFKAVKNRCLTLINRNEVKQ FT RIEKMIFDNLQSQYDDPDFYAIQELTEKIEEALARLPENVREAFELNRFQNLTYNEIAE FT RLGVSPKTIDYRIQQALKQLRIDLKEYLPLLLPFLLH" FT misc_feature complement(1211249..1211398) FT /note="Pfam match to entry PF04545 sigma70_r4, Sigma-70, FT region 4, score 50.6, E-value 2.9e-12" FT misc_feature complement(1211273..1211338) FT /note="Predicted helix-turn-helix motif with score FT 1902.000, SD 5.66 at aa 156-177, sequence FT LTYNEIAERLGVSPKTIDYRIQ" FT misc_feature complement(1211498..1211698) FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 12.0, E-value 0.013" FT CDS 1211887..1212912 FT /transl_table=11 FT /locus_tag="BF9343_0930" FT /old_locus_tag="BF0970" FT /product="putative anti-sigma factor" FT /note="Similar to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrF SWALL:Q8VTB0 FT (EMBL:AF329100) (336 aa) fasta scores: E(): 4.4e-18, 32.93% FT id in 252 aa, and to Bacteroides thetaiotaomicron putative FT anti-sigma factor BT4356 SWALL:Q89ZM1 (EMBL:AE016944) (342 FT aa) fasta scores: E(): 7.7e-45, 40.35% id in 337 aa, and to FT Bacteroides thetaiotaomicron putative anti-sigma factor FT BT4706 SWALL:Q89YM5 (EMBL:AE016946) (307 aa) fasta scores: FT E(): 5.7e-27, 32.99% id in 291 aa" FT /db_xref="InterPro:IPR006860" FT /db_xref="InterPro:IPR012373" FT /db_xref="UniProtKB/TrEMBL:Q5LGM8" FT /protein_id="CAH06711.1" FT /translation="MDESCYINESVLLNYFAGELPADRRKEVEEWIAASEDNEKMARDI FT FRLYRAADTLDYMNRVDASAALQQVKGRIHKHRHRISWMVWGQRIAACMALPLLATTLY FT LILKNPPQEYVEIRTNPGMVAEANLPDGTKVWLNSGSSLKHPVKFTGDTRTVELDGEAY FT FSVRKDRSKRFVVNTPFNIQTEVLGTEFNMEAYRTDSVVRTTLVSGSVRLSFLGKGDTK FT ETFVMKPDEEFVYNTATHEARAEKSYVEIYTAWKNGQVVLKNTSLAETLKILSKRFNVE FT FIVKDSTLYANSFTGVFSRQYLPLILEHFRYASGIQYKYLDLEYDATHKAIQEKTKIEL FT Y" FT misc_feature 1212157..1212462 FT /note="Pfam match to entry PF04773 FecR, FecR protein, FT score 25.2, E-value 3e-07" FT CDS 1213148..1216471 FT /transl_table=11 FT /locus_tag="BF9343_0931" FT /old_locus_tag="BF0971" FT /product="putative outer membrane protein" FT /note="Similar to previously sequenced Bacteroides fragilis FT outer membrane protein Omp117 SWALL:Q9AF86 (EMBL:AF364409) FT (1089 aa) fasta scores: E(): 3.9e-53, 27.76% id in 1167 aa, FT and to Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT3750 FT SWALL:Q8A1B6 (EMBL:AE016942) (866 aa) fasta scores: E(): FT 6.7e-63, 32.72% id in 874 aa, and to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT4707 SWALL:Q89YM4 FT (EMBL:AE016946) (1099 aa) fasta scores: E(): 1.1e-47, FT 28.74% id in 1183 aa" FT /db_xref="GOA:Q5LGM7" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR011662" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LGM7" FT /protein_id="CAH06712.1" FT /translation="MKKIPLCMKLSAIMLFVFASMAFAAKGYSQSVRVTLNVNNSSLQK FT VLDEIEKQSEFHFFYNNKQVDISRNVTIKSNQKEISQVLNQLFAGTNIGYKILENSIIL FT SPKQILETTAAQQQTTKKIKGLVTDETGSPVIGANIKEKETGNGTITDINGNFSLSVGT FT KSTIIISYIGYITKEVPVGNNTSLTVQLAENTKQLDEVVVTALGIKREEKALGYAVQKV FT DGDKLAAVKTVNVATSLTGKIAGLNVKNSTEFNTSPSLSLRASAPLLVIDGVPYGNVGL FT NDIAADDIESVDVLKGATASALYGARGGAGAVMITTKKGKEEGLNVTVNSSTMFAAGYL FT RKPEVQTSYSSGSQGTYSTGGYVWGDKLDIGRTALQYDPYTHEWVDMPLVSKGKNNLKN FT FQELSMVTNNNVSVSQKGKYGSVRTSLTHVYNKGQYPNQKLNKITYSVSGDMKWKKFSF FT DGGLTYNKRFYPNDMGAGYGGSGFLYNLLVWSGAEYDIRDYKNYWIKQDEQQNWMDTKW FT YDNPYFIANEIVRSSDYDLINGYLSANYDFTPWLNLSLRSGLDSYSQKKEWRNAVSAVG FT GWHKQGYYGLQRLGGYSLNNDLILSADHKFGDFNVDGFIGGNVYYWKSDNILGETQNGL FT KIPGYYSLKSSIDPVKTTSGITKKLVTSVYAKASVSWKSTLFLDVTGRNDWSSSLPSET FT RSYFYPSVAGSVVLSQFIPMPEVIDFWKVRGAWTQTKSDLGVYDTNNTYSVSTDLWNGE FT SAAYYPTSIRGVAVKPSATRSYEIGTAIHMFKNRLKLDFTYYNKLYYNLTRSAGISNSS FT GFTSTLINIDEEYVGRGVELTLSGDIIRTRDLKWESSFNWSRDRWYYTKIDPVYSTQKP FT WVAVGKRWDWYGIYDWERDSQGNLVNYNGYPKQSDYQSVIGYEYPDWIWGWTNTVTYKN FT FTLSFTLDGRVGGMAHSKTNQAMWNSGAHIDSDNQWRYDEVVNKKTNFVGSGVKVVSGS FT VDYDSNGKIIHDNRVFAPNDVQVSYESYMKSTNPYIGTVTRQNVFDETFFKLRDLSLSY FT QMPKSVCDKLHMKGLTLAFVGQNLFVWTKEFRFTDPDSDSDNLSSPSTRYLGFNVKLDF FT " FT misc_feature 1213148..1213219 FT /note="Signal peptide predicted for BF0971 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.964 between residues 24 and 25" FT misc_feature 1213949..1214134 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 16.2, E-value 1.3e-05" FT CDS 1216485..1218005 FT /transl_table=11 FT /locus_tag="BF9343_0932" FT /old_locus_tag="BF0972" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT1047 SWALL:AAO76154 (EMBL:AE016930) (514 aa) FT fasta scores: E(): 1.8e-09, 21.66% id in 540 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT3984 FT SWALL:AAO79089 (EMBL:AE016943) (537 aa) fasta scores: E(): FT 5.5e-08, 22.2% id in 545 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT0318 SWALL:AAO75425 FT (EMBL:AE016927) (404 aa) fasta scores: E(): 3.8e-07, 26.63% FT id in 413 aa" FT /db_xref="GOA:Q5LGM6" FT /db_xref="PDB:3MX3" FT /db_xref="UniProtKB/TrEMBL:Q5LGM6" FT /protein_id="CAH06713.1" FT /translation="MKRINKYISLLLATALLASCDKFDEINTDPDATTKVTSSLLATGL FT LLDITSSSASKSFIYDELLAKQMAWGESMEDYQYNVFGRSGFGGYTTLINAQKMVESVS FT DDNVNAYDGLAHFIKAYKIFYMSMEMGDLPYEEALQGELGLVRPKYNTQKEVMNFILSD FT LETAYELFSTAKDFDGDPILGGSISKWKKATTAFQLKVLMHLSKKESDADLKVKERFAR FT IVASGSLMESNEDNLQMKYADKANTVYPFHNTNTKHAGYAMLSTMLIDKFKATGDIRMF FT YYAKPAKAKLNEGVTADSWDAYIGTDPSLPFEQIEKAYATEQYSGFNARYTDYPSGEPV FT VRLGYAEQNFILAEAAVRGWISGDASAYYKKAIRAHMEFIASNTPDEEVYHHGHPITEE FT AIAAFLETPAIQLSGEKEADIEKILTQRYLASFMQHPYDVYYDYRRTGYPVLPINPATN FT RNTMNDRLPMRWMYPKSESDYNLEHQNEALERQFGGVDDVNKLMWILQ" FT misc_feature 1216485..1216541 FT /note="Signal peptide predicted for BF0972 by SignalP 2.0 FT HMM (Signal peptide probability 0.931) with cleavage site FT probability 0.332 between residues 19 and 20" FT misc_feature 1216512..1216544 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 1218084..1219112 FT /transl_table=11 FT /locus_tag="BF9343_0933" FT /old_locus_tag="BF0973" FT /product="putative endonuclease/exonuclease/phosphatase FT family protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT0169 SWALL:AAO75276 (EMBL:AE016926) FT (351 aa) fasta scores: E(): 5.1e-66, 46.28% id in 350 aa, FT and to Caenorhabditis elegans hypothetical 38.1 kDa protein FT f14f9.5 SWALL:Q9GUC9 (EMBL:AF024492) (332 aa) fasta scores: FT E(): 1.8e-13, 26.76% id in 355 aa" FT /db_xref="GOA:Q5LGM5" FT /db_xref="InterPro:IPR005135" FT /db_xref="UniProtKB/TrEMBL:Q5LGM5" FT /protein_id="CAH06714.1" FT /translation="MLRYSLLNITLWLFAVMAYGKGSELKVLQMNIWQEGTMVKGGFEA FT IADEVARLEPDIVLFSEVRNYHGKQFISRILQALEERGKKYYGENSKLDVGILSKYKIE FT EQAPNCPLEDDAGSVLKARIRINGRDVVVYSAHLDYTHYACYLPRGYSGVTWKKLDAPV FT LDAVAIEKANNESMRDEAICHVIEDARKEKGNIILLGGDFNEPSHLDWKENTKNLWDHN FT GTVVRWDCSVLLENAGFKDAYRTKYPNPVTHPGFTFPSDNEGVPVQKLSWAPDADERDR FT IDFIYFMPDRKLKLKDVSVVGPSKSIVRSERVEESGKDSFITPLGVWPTDHKAVMATFS FT LK" FT misc_feature 1218084..1218143 FT /note="Signal peptide predicted for BF0973 by SignalP 2.0 FT HMM (Signal peptide probability 0.886) with cleavage site FT probability 0.726 between residues 20 and 21" FT misc_feature 1218156..1219100 FT /note="Pfam match to entry PF03372 Exo_endo_phos, FT Endonuclease/Exonuclease/phosphatase family, score 49.6, FT E-value 5.9e-12" FT CDS 1219197..1220270 FT /transl_table=11 FT /locus_tag="BF9343_0934" FT /old_locus_tag="BF0974" FT /product="putative exported protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT secreted protein BT2915 SWALL:AAO78021 (EMBL:AE016938) (324 FT aa) fasta scores: E(): 2e-13, 27.56% id in 312 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGM4" FT /protein_id="CAH06715.1" FT /translation="MNRKNYLLAFILCVQTLFVSAQVYPVRAKLTDEKSFSMILLPDPQ FT SYTKFDANQPLFELQTAWVANSIESLNIKGVLCTGDLVEQNEIRIPDGVNGNQTSEEQW FT RAASRAFERLDGKLPYVICTGNHDYGYQKAENRLCHFPDYFPAERNSCWRKSLVAVGNN FT YQGIPTLENAAYEFITDTWGKILVVSLEFAPRDEALAWAKKVVDAPRYKDHKVILLTHS FT YLAWTGKVIESENYKVTPANYGKAIWDKLVYPAKNICMVICGHECEIADYKDNVSFRID FT KNASGKNVPQMMFNAQTADKQWFGNGGDGWLRIMEFMPDGKTIKIKTFSPLFALSPLTC FT DKSWRTDSYDQFDITIE" FT misc_feature 1219197..1219259 FT /note="Signal peptide predicted for BF0974 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.982 between residues 21 and 22" FT misc_feature 1219215..1219274 FT /note="1 probable transmembrane helix predicted for BF0974 FT by TMHMM2.0 at aa 7-26" FT misc_feature 1219470..1220003 FT /note="Pfam match to entry PF00149 Metallophos, FT Calcineurin-like phosphoesterase, score 18.2, E-value FT 0.00012" FT CDS complement(1220474..1221049) FT /transl_table=11 FT /locus_tag="BF9343_0935" FT /old_locus_tag="BF0975" FT /product="putative RNA polymerase ECF-type sigma factor" FT /note="Similar to previously sequenced Bacteroides fragilis FT RNA polymerase ECF-type sigma-factor SWALL:Q8VTB1 FT (EMBL:AF329100) (187 aa) fasta scores: E(): 2.5e-08, 29.18% FT id in 185 aa, and to Bacteroides thetaiotaomicron RNA FT polymerase ECF-type sigma factor BT4355 SWALL:AAO79460 FT (EMBL:AE016944) (191 aa) fasta scores: E(): 1.6e-44, 64.02% FT id in 189 aa, and to Bacteroides thetaiotaomicron RNA FT polymerase ECF-type sigma factor BT1053 SWALL:AAO76160 FT (EMBL:AE016930) (202 aa) fasta scores: E(): 2.6e-22, 41.34% FT id in 179 aa" FT /db_xref="GOA:Q5LGM3" FT /db_xref="InterPro:IPR007627" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR013324" FT /db_xref="InterPro:IPR013325" FT /db_xref="InterPro:IPR014284" FT /db_xref="InterPro:IPR014327" FT /db_xref="UniProtKB/TrEMBL:Q5LGM3" FT /protein_id="CAH06716.1" FT /translation="MKPNRTKEDILLLSQLQQGDKKAFNTLFRRYYPILCAYAHRFVDL FT EDAEEIVQDVMLWLWENREILLIESSLSQYLLKMIYHRSLNRIAQKEVKYRADTLFYEK FT SQAMIYDVDFYQIEELTKRIHTAIAELPESYREAFIMHRFRDMSYKEIAQTLNTSTKTV FT DYRIQQALKLLRKELKEFLSFALIFLAA" FT misc_feature complement(1220522..1220671) FT /note="Pfam match to entry PF04545 sigma70_r4, Sigma-70, FT region 4, score 54.1, E-value 2.7e-13" FT misc_feature complement(1220546..1220611) FT /note="Predicted helix-turn-helix motif with score FT 1594.000, SD 4.62 at aa 147-168, sequence FT MSYKEIAQTLNTSTKTVDYRIQ" FT misc_feature complement(1220771..1220971) FT /note="Pfam match to entry PF04542 sigma70_r2, Sigma-70 FT region 2, score 30.1, E-value 4.4e-06" FT CDS 1221185..1222192 FT /transl_table=11 FT /locus_tag="BF9343_0936" FT /old_locus_tag="BF0976" FT /product="putative anti-sigma factor" FT /note="Similar to previously sequenced Bacteroides fragilis FT fragilis regulatory region FrrF SWALL:Q8VTB0 FT (EMBL:AF329100) (336 aa) fasta scores: E(): 2.8e-16, 30.83% FT id in 240 aa, and to Bacteroides thetaiotaomicron putative FT anti-sigma factor BT4356 SWALL:AAO79461 (EMBL:AE016944) FT (342 aa) fasta scores: E(): 7.4e-72, 57.05% id in 340 aa, FT and to Bacteroides thetaiotaomicron putative anti-sigma FT factor BT3749 SWALL:AAO78854 (EMBL:AE016942) (322 aa) fasta FT scores: E(): 8.5e-35, 38.29% id in 329 aa" FT /db_xref="InterPro:IPR006860" FT /db_xref="InterPro:IPR012373" FT /db_xref="UniProtKB/TrEMBL:Q5LGM2" FT /protein_id="CAH06717.1" FT /translation="MNYEDIDHLLPRYCEGLATEEECRQVESWMEESEDNRKIVDQINT FT LYIAVDTVNVMRKVDTEKALKKVSSRMIVRKTTWWEWMQRVAAILFIPLSVAFLVQYMH FT NGKSAVCQMMEIKTNPGMTTSVVLPDSTVVYLNSESSLRYPSVFEGDIRNVELKGEAYF FT AVAKDLKKKFVVSAPHSSQIEVLGTHFNVEAYEDEPDVSTTLVEGQVCFHFSDKDYLAK FT KVVMKPGQRLVYSSTNGDVQLYATSCLSETAWKDGKIIFNNTPLDVALRMLEKRFNVTF FT KLKNARLKTNAFTGTFTEQRLERILEYFKISSKIQWRYLESPDIRDERSIIEVY" FT misc_feature 1221428..1221496 FT /note="1 probable transmembrane helix predicted for BF0976 FT by TMHMM2.0 at aa 82-104" FT CDS 1222361..1225741 FT /transl_table=11 FT /locus_tag="BF9343_0937" FT /old_locus_tag="BF0977" FT /product="putative TonB-dependent outer membrane receptor FT protein" FT /note="C-terminus is similar to Bacteroides Caccae FT TonB-linked outer membrane protein OmpW SWALL:Q93FV1 FT (EMBL:AF305878) (947 aa) fasta scores: E(): 1.1e-62, 29.67% FT id in 1001 aa, and C-terminus is similar to Bacteroides FT thetaiotaomicron putative outer membrane protein, probably FT involved in nutrient binding BT2894 SWALL:AAO78000 FT (EMBL:AE016937) (1018 aa) fasta scores: E(): 5.1e-86, FT 31.08% id in 1039 aa, and C-terminus is similar to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT3854 FT SWALL:AAO78959 (EMBL:AE016942) (1012 aa) fasta scores: E(): FT 2.3e-77, 32.68% id in 1034 aa and entire protein is similar FT to Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT2461 FT SWALL:AAO77568 (EMBL:AE016936) (1134 aa) fasta scores: E(): FT 1e-73, 33.5% id in 1167 aa" FT /db_xref="GOA:Q5LGM1" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR011662" FT /db_xref="InterPro:IPR012910" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR023996" FT /db_xref="InterPro:IPR023997" FT /db_xref="UniProtKB/TrEMBL:Q5LGM1" FT /protein_id="CAH06718.1" FT /translation="MQNYFSIQLLRVVKSSLWLTSKKIPRTMRLFILFLICSMSFVHAT FT DSFAQKVEISIDAQNQTVEKVLKEIEKQSGFGFFFNNKHVNLKRVVSVSVDKSNIFKVL FT DKIFEGTDVKYSVLDKKIILSTEMTSKQQQAVKISGKVVDVNGEPVIGASIVEKGTTNG FT TVTNLQGDFSLSVSSDKAVIEISYIGYQPQELKVIAGKPLNVTMKEDAQALEEVVVVGY FT GSQKKVNVIGSIAAVDSKKLESRTAPSVSNMLTGQLSGVTITQSSGNPGQDQGTIRVRG FT VGSFGATPDPLVLVDGLPGSLNDLNPADIESISILKDASSAAIYGSRAANGVVLVKTKG FT GQKGKVTVSYNGYVGFNQATELPEMCDSWEYAELYNKAMGKEVYSAEEIQKYKDGSDPY FT NYPNEHYLDKLLGNKGLQTGHELTVNGGNDKTQYMVSFGYVKQNGLMEHNHYDRYNGRV FT NLTTELAKNLTLTTRLGGVVSKRSEPSTPGGMDSAGFKAFSSNALRFPGLWATKLEDGS FT YGLGPKVLGTPLAWLDSGSFYDENFDKFRSNVELAFTPVKGLTLKAIGGYNYTGQQIRH FT YRSAMEITGGKKLGPSSLSDTMYKTVYKTFQALADYNVKFSKNDLSVLVGYTWEDESQR FT TVGGSRLNFPSDEVPYLNAGGADGQTNSGGGYDWAIMSVFGRLTYNYDQRYLFETTMRY FT DGSSRFPTDNKFGFFPSVAVGWRLSEEQFFKEAESLSFIDNLKLKASYGILGNNNIGNY FT PYQSTYALGKAMNYVFGGVYTQGAAVTTYVDPTLKWEKTRTTDVGIETAFWNNKLTFNA FT AYFYRKTTDILYKPSASYSSIFGLGLSQVNTGSLENKGWEFEIGHQNKIGEFSYHVNGN FT FSIIKNKVISLGVGDVEQKSGMIGNGSDLFLGYPMNMFYGYKTDGVFLTDDEVKEWHDQ FT SKIAPNSKAGDLRYVDISGDGKVDESDKTYLGSKIPQYTFGLGLGAEYKGFDFNILLQG FT VAKVKGQLTNYAGYAFFQEGNIQKWQAEETWTNNQSNRYPKYPRLEVMSNAGSNNTLGS FT DFWILDASYLKVRNIQLGYTLPKRITQKFGSSNLRFYISLDNPFSISGYRKGWDPEINT FT DGSYYPILSTYTFGLTLKF" FT misc_feature 1222361..1222492 FT /note="Signal peptide predicted for BF0977 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.958 between residues 44 and 45" FT misc_feature 1223042..1225738 FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 38.0, E-value 1.9e-08" FT CDS 1225748..1227388 FT /transl_table=11 FT /locus_tag="BF9343_0938" FT /old_locus_tag="BF0978" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein, probably involved in nutrient FT binding BT0451 SWALL:AAO75558 (EMBL:AE016927) (553 aa) FT fasta scores: E(): 1.1e-21, 26.07% id in 579 aa, and to FT Bacteroides thetaiotaomicron putative outer membrane FT protein, probably involved in nutrient binding BT2195 FT SWALL:AAO77302 (EMBL:AE016935) (580 aa) fasta scores: E(): FT 3.3e-20, 28.47% id in 576 aa, and to Bacteroides FT thetaiotaomicron hypothetical protein BT0361 SWALL:AAO75468 FT (EMBL:AE016927) (601 aa) fasta scores: E(): 7.2e-17, 28.17% FT id in 607 aa" FT /db_xref="InterPro:IPR012944" FT /db_xref="PDB:3I4G" FT /db_xref="UniProtKB/TrEMBL:Q5LGM0" FT /protein_id="CAH06719.1" FT /translation="MKSLKYIVALALAAGLFQACDLERYPLTDLSEETFWNSESNAELA FT LTSLYRGSLTDGVEYNPSDWWSYHGMIMMEHLSDNAFDRRGENNPFFKISSGNLTADNA FT FIKRYWETSYKRIGYCNRFLVGIQNSSESEKKTRMIAEARFLRATQYFYLASYFKNVPL FT VENVLTGEEANNVTKTSQADILKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFL FT GRTCMLQKDWKSGAKAFHDIMELGDNAINANYQELFYPSTGTSNKENIFYIQYLENYLG FT TGLPQHALSAKDGGWSLVNPAADLYESYEFKDGTPFSYDDPRYDPSNLGKDRDPRLDYT FT IYYNGAIFMGTEYKMSPDYSAAKKEKLDYTSEASRTGFMMRKYFEESTPINDVQSANGL FT TPVIRYAEVLLGYLECLVEDNQTITQGILDETINAVRGRASVNMPPVTEVTPAKLREIV FT RHERRIELAMEGIRYWDIMRWGIAHEVLSQKIWGAPYPGSTQYATTTKEVDPTGNYRWY FT VGKRAFRNPTDYTWPIPQSEQNINPNLRD" FT misc_feature 1225748..1225804 FT /note="Signal peptide predicted for BF0978 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.993 between residues 19 and 20" FT misc_feature 1225775..1225807 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 1227405..1228970 FT /transl_table=11 FT /locus_tag="BF9343_0939" FT /old_locus_tag="BF0979" FT /product="putative arylsulfatase precursor" FT /note="Similar to Klebsiella pneumoniae arylsulfatase FT precursor AtsA SWALL:Q9X759 (EMBL:AJ131525) (577 aa) fasta FT scores: E(): 4.9e-13, 24.9% id in 530 aa, and to FT Bacteroides thetaiotaomicron putative arylsulfatase FT precursor BT4631 SWALL:AAO79736 (EMBL:AE016946) (520 aa) FT fasta scores: E(): 1.4e-143, 67.3% id in 520 aa, and to FT Bacteroides thetaiotaomicron putative secreted sulfatase FT BT1624 SWALL:AAO76731 (EMBL:AE016932) (515 aa) fasta FT scores: E(): 4.8e-119, 57.85% id in 503 aa, and to Rattus FT norvegicus steryl-sulfatase precursor Sts SWALL:STS_RAT FT (SWALL:P15589) (577 aa) fasta scores: E(): 1.1e-18, 30.83% FT id in 506 aa" FT /db_xref="GOA:Q5LGL9" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR024607" FT /db_xref="UniProtKB/TrEMBL:Q5LGL9" FT /protein_id="CAH06720.1" FT /translation="MRQYVLLACLSPVACLMAATGQKGGKAKQKINDRQLPNVVFIYAD FT DLGYGDLECYGAKNVQTPNVNRLAAEGIRFNNAHATAATSTPSRYSMLTGEYAWRRPGT FT DIAAGNAGMIIRPERYTMADMFKNAGYATAAIGKWHLGLGDKDGEQDWNAPLPTALGDI FT GFDYSYIMAATADRVPCVFIENGKVANYDPSAPIEVSYRKPIEGEPLGKDHPELLFNLK FT SSHGHDMAIVNGIGRIGYMKGGGKALWKDENIADSITSHAIGFIREHKDEPFFMYFATN FT DVHVPRFPHDRFRGKNPMGLRGDAIVQFDWSVGQIMETLDKLGLSENTLIILSSDNGPV FT VDDGYQDRAEELLNGHSPAGPLRGNKYSAFEGGTRIPAIVRWPKGAASSQVSNALVSQI FT DWFASLASLVGAGLPKGAAPDSFNYLDTWLGKNQSDRSWVIEQASNHTLSVRTKDWKYI FT EPNDGPAMITWGPKIETGNLSTPQLYHVVDDVAEQKNVASLHPDLVFELQNILRHVRMK FT NLKP" FT misc_feature 1227405..1227458 FT /note="Signal peptide predicted for BF0979 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.691 between residues 18 and 19" FT misc_feature 1227513..1228673 FT /note="Pfam match to entry PF00884 Sulfatase, Sulfatase, FT score 159.0, E-value 6.7e-45" FT misc_feature 1227651..1227689 FT /note="PS00523 Sulfatases signature 1." FT misc_feature 1227792..1227824 FT /note="PS00149 Sulfatases signature 2." FT CDS 1229146..1230702 FT /transl_table=11 FT /locus_tag="BF9343_0940" FT /old_locus_tag="BF0980" FT /product="putative arylsulfatase" FT /note="Similar to Homo sapiens steryl-sulfatase precursor FT Sts SWALL:STS_HUMAN (SWALL:P08842) (583 aa) fasta scores: FT E(): 6.9e-14, 29.6% id in 456 aa, and to Microscilla sp. FT PRE1 Ms133, putative arylsulfatase SWALL:Q93P98 FT (EMBL:AF339846) (512 aa) fasta scores: E(): 1.8e-115, FT 57.28% id in 501 aa, and to Bacteroides thetaiotaomicron FT arylsulfatase A precursor BT3109 SWALL:Q8A346 FT (EMBL:AE016939) (508 aa) fasta scores: E(): 1.1e-112, FT 55.28% id in 483 aa" FT /db_xref="GOA:Q5LGL8" FT /db_xref="InterPro:IPR000917" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR024607" FT /db_xref="UniProtKB/TrEMBL:Q5LGL8" FT /protein_id="CAH06721.1" FT /translation="MTNERMKLLNCTLGLVAGVSLPVSALAVPQPAQEQTEKQPNIILI FT VADDLGYGDLSCYGAHRIQTPGMDRIANEGIRFTQGFCTAATSTPSRYSVMTGKYPWSN FT VDAKILPGNAALIIDTQKITLPKLMKQAGYTTGSVGKWHIGLGDGHVDWNKEVHPGAAE FT IGYDYSFIQAATNDRVPCVFLENGRVVGLDPNDPLYVDYRKNFPGEPTGKENPELLRMH FT PSVGHAGSIVNGVPRIGFQKGGKAAQWKDEEMAGLFLDKARQFVDDNKDKPFFLYYGLH FT QPHVPRVPNERFVGKSGMGPRGDVILEADWCVDQFLKELDKLGLAENTIVILTSDNGPV FT LDDGYQDDAVELVGDHKIAGPLRGGKTSMFDGGTRIPFMLRWPAKVKPQVSDVFVCQMD FT LLASFASLLGQTYPDKVDSENTLDAFLGKSKKGRKELVIEGMFNYAYRQGDWALIPPYY FT NPYSKEDGDFIGLGYGYKLYNLKSDIGQQKNLAEKYPKKLGELINRFEYLKAHSDKVTR FT F" FT misc_feature 1229146..1229226 FT /note="Signal peptide predicted for BF0980 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.905 between residues 27 and 28" FT misc_feature 1229263..1230432 FT /note="Pfam match to entry PF00884 Sulfatase, Sulfatase, FT score 190.7, E-value 1.9e-54" FT misc_feature 1229401..1229439 FT /note="PS00523 Sulfatases signature 1." FT misc_feature 1229542..1229574 FT /note="PS00149 Sulfatases signature 2." FT misc_feature 1230223..1230246 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(1230782..1231228) FT /transl_table=11 FT /locus_tag="BF9343_0941" FT /old_locus_tag="BF0981" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4360 SWALL:AAO79465 (EMBL:AE016945) (148 aa) FT fasta scores: E(): 4.4e-40, 71.62% id in 148 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGL7" FT /protein_id="CAH06722.1" FT /translation="MKLSQQSQAIIESAIQKAINKYTCGCEQTIVTDIHIQPNQNSGEL FT FIYDDEDEELSSVTIDEWTAYEGDDFCEDAERIFRTVLCRMKENGSFDKLTILKPYSFV FT LVDEDKETISELLLVDDDTLLVNDELLKGLDKELDDFLKDLLEK" FT CDS complement(1231293..1232393) FT /transl_table=11 FT /locus_tag="BF9343_0942" FT /old_locus_tag="BF0982" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4361 SWALL:Q89ZL6 (EMBL:AE016945) (369 aa) fasta FT scores: E(): 7.1e-76, 55.64% id in 372 aa" FT /db_xref="GOA:Q5LGL6" FT /db_xref="InterPro:IPR011990" FT /db_xref="UniProtKB/TrEMBL:Q5LGL6" FT /protein_id="CAH06723.1" FT /translation="MTKYPYILFVLLLASFSSCQTVEQLSIDYMLPAEISFPNELKRVA FT VVNNVSDTPDNTLPPKDNTIKNKNELSRAVAYHEGQPALTTEVLAKAIAEQNYFNEVVI FT CDSALRARDFTPRESTLSQEEVQTLAQFLDVDCIISLENLQMKSTRVLSYIPEWNTYYG FT TLDTKVYPTLKIYLPGRKSPMVTINTHDSIFWEEYGNTEGFVRSRLPDERQMIREASEF FT AGSVPVNRILPYWKTANRYYFINGSVAMRDAAVYVKENEWEKASKLWEQAFKAAKNDKK FT KMRAAFNLALYYEMKDSVEEAHKWAVTAQELARKIDKIDTLKRNDIDLSEIPNYYLTSL FT YVNELKERSNGLGKLKGQMSRFNEDF" FT CDS complement(1232513..1235842) FT /transl_table=11 FT /gene="secA" FT /locus_tag="BF9343_0943" FT /old_locus_tag="BF0983" FT /product="putative preprotein translocase SecA component" FT /note="Similar to Bacillus subtilis preprotein translocase FT SecA subunit or Div+ SWALL:SECA_BACSU (SWALL:P28366) (841 FT aa) fasta scores: E(): 9.9e-66, 40.48% id in 946 aa, and to FT Bacteroides thetaiotaomicron preprotein translocase SecA FT subunit BT4362 SWALL:AAO79467 (EMBL:AE016945) (1106 aa) FT fasta scores: E(): 0, 92.79% id in 1110 aa, and to FT Chlorobium tepidum preprotein translocase SecA subunit or FT CT1239 SWALL:Q8KD18 (EMBL:AE012884) (1031 aa) fasta scores: FT E(): 2e-146, 49.01% id in 1114 aa" FT /db_xref="GOA:Q5LGL5" FT /db_xref="HSSP:1TM6" FT /db_xref="InterPro:IPR000185" FT /db_xref="InterPro:IPR004027" FT /db_xref="InterPro:IPR011115" FT /db_xref="InterPro:IPR011116" FT /db_xref="InterPro:IPR011130" FT /db_xref="InterPro:IPR014018" FT /db_xref="InterPro:IPR020937" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGL5" FT /protein_id="CAH06724.1" FT /translation="MGFNEFLSSIFGNKSTRDMKEIQPWVDKIKAAYPEVAKLDNDGLR FT AKTEELKEYIRNSASKERAKADELRAGIENVELEDREEVFAQIDKIEKEILEIYEKALD FT EVLPVAFSIVKESAKRFSENEEIVVTATDFDRKLAATKDFVRIEGDKAIWQNHWNAGGN FT DTVWNMVHYDVQLFGGVVLHKGKIAEMATGEGKTLVATLPVFLNALTGNGVHVVTVNDY FT LAKRDSEWMGPLYMFHGLSVDCIDRHQPNSDARRQAYLADITFGTNNEFGFDYLRDNMA FT ISPKDLVQRQHNYAIVDEVDSVLIDDARTPLIISGPVPKGEDQLFDQLRPLVERLVEAQ FT KVLATKYLSEAKKLINSDDKKEVEEGFLALFRSHKALPKNKALIKFLSEQGIKAGMLKT FT EEIYMEQNNKRMHEATDPLYFVIDEKLNSVDLTDKGVDLITGNSEDPTLFVLPDIAAQL FT SELENEHGLSDEQKLEKKDALLTNYAIKSERVHTINQLLKAYTMFEKDDEYVVIDGQVK FT IVDEQTGRIMEGRRYSDGLHQAIEAKEGVKVEAATQTFATITLQNYFRMYHKLSGMTGT FT AETEAGELWDIYKLDVVVIPTNRPIARKDMNDRVYKTKREKYKAVIEEIEQLVQAGRPV FT LVGTTSVEISEMLSKMLTMRKIEHNVLNAKLHQKEADIVAKAGLSGTVTIATNMAGRGT FT DIKLSPEVKAAGGLAIIGTERHESRRVDRQLRGRAGRQGDPGSSVFFVSLEDDLMRLFS FT SDRIASVMDKLGFQEGEMIEHKMISNSIERAQKKVEENNFGIRKRLLEYDDVMNKQRTV FT VYTKRRHALMGERIGMDIVNMIWDRCAAAIENNADYEECKLDLLQTLAMEAPFTEEEFR FT NEKKDKLADKTFDVAMANFKRKTERLAQIANPVIKQVYENQGHMYENILIPITDGKRMY FT NISCNLKAAYESESKEVVKSFEKSILLHVIDESWKENLRELDELKHSVQNASYEQKDPL FT LIYKLESVTLFDNMVNKINNQTVSILMRGQIPVAEPTEEQQEAARRVEVRQAAPEQRQD FT MSKYREQKQDLNDPNQQAAAQQDTREAVKREPIRAEKTVGRNDPCPCGSGKKYKNCHGR FT NS" FT misc_feature complement(1232516..1232578) FT /note="Pfam match to entry PF02810 SEC-C, SEC-C motif, FT score 44.1, E-value 2.8e-10" FT misc_feature complement(1233644..1233895) FT /note="Pfam match to entry PF00271 helicase_C, Helicase FT conserved C-terminal domain, score 10.4, E-value 0.0014" FT misc_feature complement(1233749..1233796) FT /note="PS01312 Protein secA signatures." FT misc_feature complement(1233980..1235824) FT /note="Pfam match to entry PF01043 SecA_protein, SecA FT protein, amino terminal region, score 545.1, E-value FT 4.1e-161" FT CDS complement(1235950..1237524) FT /transl_table=11 FT /locus_tag="BF9343_0944" FT /old_locus_tag="BF0984" FT /product="putative alkaline phosphatase" FT /note="Similar to Fluoribacter gormanii alkaline FT phosphomonoesterase precursor PafA SWALL:CAD23197 FT (EMBL:AJ430585) (540 aa) fasta scores: E(): 3.9e-15, 25.22% FT id in 555 aa, and to Bacteroides thetaiotaomicron putative FT alkaline phosphatase BT4363 SWALL:AAO79468 (EMBL:AE016945) FT (524 aa) fasta scores: E(): 7.2e-173, 75.38% id in 524 aa, FT and to Synechococcus sp. alkaline phosphatase PhoV FT SWALL:Q55320 (EMBL:Z48801) (550 aa) fasta scores: E(): FT 2.2e-24, 28.92% id in 529 aa" FT /db_xref="GOA:Q5LGL4" FT /db_xref="InterPro:IPR002591" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="UniProtKB/TrEMBL:Q5LGL4" FT /protein_id="CAH06725.1" FT /translation="MKGLLTSILTVLTFTGLQAQPLPSTPKLVVGLTIDQLRTDYLEAF FT STLYGDRGFRRLWKEGRVFRNAEYTFSGTDRASAIAAIYTGTTPSVNGIIGKRWMDVST FT LRTVSCVDDPAFMGNYTNESSSPSHLLTSTIADELKIATRNEGLVYAIAPFRDAAILAA FT GHAGNGAFWLNNTTGKWCGTTYYSEFPWWVSQYNDRNAIDFRIADMTWTPVHPVQSYSF FT LPEWRDAAFKYKFDDDRVNKYKRLITSPFINDEINTLTEELLDKSTMGKDHVPDMLALT FT YYAGNYAHKSVQECAMEMQDTYVRLDRSIASLLDIIDKKVGLQNVVFFITSTGYTDTES FT PDLGLYRVPTGEFHLNRCAALLNMYLMATYGQGQYVEAYYDQQIYLNHKLIEEKQLNLA FT DIQEKAAEFLIQFSGVNEVYSGKRLLLGSWTPDISMIRNSFHRKRSGDLLIDVLPGWSI FT VNENTSDHKVVRKAHIPSPLIFMGSGVKPAVINTPVTIDHIAPTVAHILRIRSPNACSA FT TPITDIR" FT misc_feature complement(1236064..1237500) FT /note="Pfam match to entry PF01663 Phosphodiest, Type I FT phosphodiesterase / nucleotide pyrophosphatase, score FT -114.7, E-value 0.00028" FT misc_feature complement(1237468..1237524) FT /note="Signal peptide predicted for BF0984 by SignalP 2.0 FT HMM (Signal peptide probability 0.997) with cleavage site FT probability 0.991 between residues 19 and 20" FT CDS complement(1237521..1238747) FT /transl_table=11 FT /locus_tag="BF9343_0945" FT /old_locus_tag="BF0985" FT /product="putative transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4364 SWALL:Q89ZL3 (EMBL:AE016945) FT (395 aa) fasta scores: E(): 2.5e-66, 64.67% id in 402 aa, FT and to Xanthomonas campestris hypothetical protein Xcc2334 FT SWALL:Q8P8A9 (EMBL:AE012341) (412 aa) fasta scores: E(): FT 1.9e-17, 30.57% id in 350 aa" FT /db_xref="GOA:Q5LGL3" FT /db_xref="UniProtKB/TrEMBL:Q5LGL3" FT /protein_id="CAH06726.1" FT /translation="MNSKLRHLLLIVFSIFPILTWGTESLSTADSIRISLLTCAPGEEI FT YSLFGHTAIRYEEPARGIDRVYNYGLFSFNTPNFILRFALGKTDYQLGVEDYRRFAAEY FT EYFGRSVWQQTLNLTVEEQQQLITLLEENYRPENRIYRYNFFYDNCATRPRDKVEESLQ FT KSGSQLLFSNAHTENGETKSYRDIVHQYTKGHPWAQFGIDFCIGSQADRPINDRQMMFA FT PFYLMDAFAGARIANTSDNKALVTSTQKIIDCEPDVSGSTENDIWNMLTPIRLSLLVFI FT AIGMATVYGLRKKKSLWGLDIAVFAAAGIAGCIVAFLALFSEHPTVGSNYLLFVFHPGH FT LLCLPFFINDERKRRKSRYHLLNCIVLTLFIVLFPVIPQNFDLAVLPLALCLLIRSASN FT LILTYKKAK" FT misc_feature complement(order(1237542..1237601,1237614..1237667, FT 1237704..1237757,1237785..1237853,1237872..1237940)) FT /note="5 probable transmembrane helices predicted for FT BF0985 by TMHMM2.0 at aa 235-257, 264-286, 296-313, 326-343 FT and 348-367" FT CDS 1239342..1240073 FT /transl_table=11 FT /locus_tag="BF9343_0946" FT /old_locus_tag="BF0989" FT /product="putative regulatory protein" FT /note="Limited similarity to Bordetella pertussis Bvg FT accessory factor Baf SWALL:BAF_BORPE (SWALL:Q45338) (267 FT aa) fasta scores: E(): 0.00035, 30.22% id in 225 aa, and to FT Bacteroides thetaiotaomicron putative transcription FT regulator BT4366 SWALL:AAO79471 (EMBL:AE016945) (222 aa) FT fasta scores: E(): 1.1e-66, 77.92% id in 222 aa, and to FT Thermotoga maritima hypothetical protein Tm0883 FT SWALL:Q9WZY5 (EMBL:AE001754) (246 aa) fasta scores: E(): FT 3.6e-13, 31.27% id in 243 aa" FT /db_xref="GOA:Q5LGL2" FT /db_xref="InterPro:IPR004619" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGL2" FT /protein_id="CAH06727.1" FT /translation="MNLIIDIGNTVAKVALFDRTSMVEVVYDSNQSLDSLEAVCNKYDV FT RKAIVATVIDLNECVLAQLNKLPVPVLWLDSHTPLPVINLYETPETLGYDRMAAVVAAH FT DQFPGKDILVIDAGTCITYEFVDSLGQYHGGNISPGLWMRLKALHQFTGRLPLVHAEGR FT MPDMGKDTETAIRAGVKKGIEYEITGYIAAMKHKYPELLVFLTGGDDFSFDTKLKSVIF FT ADRFLVLKGLNRILNYNNGRI" FT misc_feature 1239345..1239920 FT /note="Pfam match to entry PF03309 Bvg_acc_factor, FT Bordetella pertussis Bvg accessory factor family, score FT 94.4, E-value 2e-25" FT CDS 1240060..1241334 FT /transl_table=11 FT /locus_tag="BF9343_0947" FT /old_locus_tag="BF0990" FT /product="putative outer membrane protein" FT /note="Similar to Bacteroides thetaiotaomicron putative FT outer membrane protein BT4367 SWALL:AAO79472 FT (EMBL:AE016945) (431 aa) fasta scores: E(): 6.4e-99, 58.58% FT id in 437 aa, and to Bacteroides thetaiotaomicron FT hypothetical protein BT1785 SWALL:AAO76892 (EMBL:AE016933) FT (401 aa) fasta scores: E(): 4.2e-18, 27.18% id in 423 aa" FT /db_xref="InterPro:IPR017690" FT /db_xref="UniProtKB/TrEMBL:Q5LGL1" FT /protein_id="CAH06728.1" FT /translation="MVGYKQTLCALLLTILLPGVAIAQNNTNSPYTRYGYGQLADQSFA FT NSKAMGGIAYGLRDGSHINPLNPASYTAIDSLTFLFDGGFSMQNTNFSSEGTKLNAKNS FT SFDYIAMQFRLHQRVAMSIGLLPYSSVGYNMAKANNDVASEEARSVTSFAGDGGLHQLY FT VGLGVKVLKNLSVGANVSYFWGEITRQARITFPYNDNAFAFQHVDYLSVRDYKLDFGAQ FT YTQQLGRKHAVTLGVVFSPKKDLHNEAYVQRSTLTNSNSTQAVTTNTVDTVATFGMPNS FT FGVGLTYEYDKRLIVGADFNLQKWGDVTYMNQPNAFCDAMKISVGAEYMPSRFSRSYLA FT HIKYRVGGYYSEPYYKIGGERASREYGVTAGLGLPLPGSRSLINVSAQYIKVHGLKAGM FT VDENTLRLSIGITFNEGWFFKRKVK" FT misc_feature 1240060..1240128 FT /note="Signal peptide predicted for BF0990 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.996 between residues 23 and 24" FT CDS 1241380..1242705 FT /transl_table=11 FT /locus_tag="BF9343_0948" FT /old_locus_tag="BF0991" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4368 SWALL:Q89ZK9 (EMBL:AE016945) (433 aa) fasta FT scores: E(): 8.2e-144, 85.21% id in 433 aa" FT /db_xref="GOA:Q5LGL0" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="UniProtKB/TrEMBL:Q5LGL0" FT /protein_id="CAH06729.1" FT /translation="MKIKTLVAVLFLSAGATTVVAQDDANCNSNSSISHEAVKAGNFKD FT AYTPWKAVLENCPTLRFYTFTDGYKILKGLLGQIKDRNSAEYKKYFDELMNTHDLRMKY FT TQEFLGKGVKVSSEDEALGIKAVDYIAFAPKVDVNQAYDWLKKSVDAAKAESAAATLFY FT FLQMSHDKLKEDPAHKEQFIQDYLAASEYADDAIAAADKESVKKAFGGIKDNLVALFIN FT SGTADCESLQGIYGPKVETNQTDLNYLKKVISIMKMMKCTDSDAYQQASFYVYKIEPSA FT EAATGCAYQAYKKGDIDGSVKFFDEAINLETDNAKKAEKAYAAASVLTTAKKLSQARSY FT AQKAISFNENYGAPYILIANLYAMSPNWSDESALNKCTYFAVIDKLQKAKSVDPSVTEE FT VNKMISRYSAYTPQAKDLFMLGYKAGDRITIGGWIGESTTIR" FT misc_feature 1241380..1241442 FT /note="Signal peptide predicted for BF0991 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.993 between residues 21 and 22" FT CDS 1241398..1242705 FT /transl_table=11 FT /locus_tag="BF9343_0949" FT /old_locus_tag="BF0991" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4368 SWALL:Q89ZK9 (EMBL:AE016945) (433 aa) fasta FT scores: E(): 8.7e-145, 85.21% id in 433 aa" FT /db_xref="GOA:Q5LGK9" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="UniProtKB/TrEMBL:Q5LGK9" FT /protein_id="CAH06730.1" FT /translation="MAVLFLSAGATTVVAQDDANCNSNSSISHEAVKAGNFKDAYTPWK FT AVLENCPTLRFYTFTDGYKILKGLLGQIKDRNSAEYKKYFDELMNTHDLRMKYTQEFLG FT KGVKVSSEDEALGIKAVDYIAFAPKVDVNQAYDWLKKSVDAAKAESAAATLFYFLQMSH FT DKLKEDPAHKEQFIQDYLAASEYADDAIAAADKESVKKAFGGIKDNLVALFINSGTADC FT ESLQGIYGPKVETNQTDLNYLKKVISIMKMMKCTDSDAYQQASFYVYKIEPSAEAATGC FT AYQAYKKGDIDGSVKFFDEAINLETDNAKKAEKAYAAASVLTTAKKLSQARSYAQKAIS FT FNENYGAPYILIANLYAMSPNWSDESALNKCTYFAVIDKLQKAKSVDPSVTEEVNKMIS FT RYSAYTPQAKDLFMLGYKAGDRITIGGWIGESTTIR" FT CDS 1242713..1243327 FT /transl_table=11 FT /locus_tag="BF9343_0950" FT /old_locus_tag="BF0992" FT /product="conserved hypothetical exported protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4369 SWALL:Q89ZK8 (EMBL:AE016945) FT (193 aa) fasta scores: E(): 1.1e-49, 67.97% id in 178 aa" FT /db_xref="InterPro:IPR010664" FT /db_xref="UniProtKB/TrEMBL:Q5LGK8" FT /protein_id="CAH06731.1" FT /translation="MRQQSNSLLNKSLSITIVFGAIVVLLLFSSCGGRNKAMADAITER FT DSLPVMDTRGVTTLISDSGVTRYRVNTEEWLIFDKKKPSYWAFEKGIYLEQFDSLFHID FT ASIKADTAYYYDRDRLWKLIGNVDIKSLKGDHVTTELLYWNEATKKVYTDKFVRMEKPD FT QIMTGYGFESDDQFMKPVVHNISGIVYIDEDAEKAKTDSVN" FT misc_feature 1242713..1242829 FT /note="Signal peptide predicted for BF0992 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.914 between residues 39 and 40" FT CDS 1243330..1244586 FT /transl_table=11 FT /locus_tag="BF9343_0951" FT /old_locus_tag="BF0993" FT /product="putative transmembrane CBS domain transporter" FT /note="Similar to Streptococcus pneumoniae hemolysin HlyX FT or SPR1778 SWALL:Q8DNE9 (EMBL:AE008542) (443 aa) fasta FT scores: E(): 6.1e-30, 30.34% id in 435 aa, and to FT Bacteroides thetaiotaomicron putative hemolysin BT4370 FT SWALL:AAO79475 (EMBL:AE016945) (418 aa) fasta scores: E(): FT 1.4e-135, 87.79% id in 418 aa, and to Streptococcus FT pneumoniae CBS domain protein SP1963 SWALL:Q97NQ5 FT (EMBL:AE007486) (443 aa) fasta scores: E(): 6.1e-30, 30.34% FT id in 435 aa" FT /db_xref="GOA:Q5LGK7" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR002550" FT /db_xref="InterPro:IPR005170" FT /db_xref="InterPro:IPR016169" FT /db_xref="UniProtKB/TrEMBL:Q5LGK7" FT /protein_id="CAH06732.1" FT /translation="MSIIIYLLITMAFSAFFSGMEIAFVSVDKLRFEMDRKGGVSSRIL FT SLFFRNPNDFISTMLVGNNIALVIYGILMAQIIGDNLLAGWITNHFVMVLVQTVISTLI FT ILVTGEFLPKTLFKINPNLALNVCAVPLFICYVVLYPISKFSSGVSYLFLRLFGMKVNK FT EASAKAFGKVDLDYFVQSSIDNAESEETLDTEVKIFQNALDFSAVKIRDCIVPRTEVVA FT VALDTSLEELKGRFVESGISKIIVYDGNIDNVVGYIHSSEMFRSPKDWRNHVKEVPIVP FT ETMAAHKLMKLFMQQKKTIAVVVDEFGGTSGIVSLEDLVEEIFGDIEDEHDNTSYICKQ FT IGEHEYVLSARLEIEKVNETFNLELPESDDYLTVGGLILNQYQSFPKLHELVSVGKYQF FT KIIKVTATKIELVRLKVME" FT misc_feature 1243330..1243398 FT /note="Signal peptide predicted for BF0993 by SignalP 2.0 FT HMM (Signal peptide probability 0.932) with cleavage site FT probability 0.659 between residues 23 and 24" FT misc_feature 1243333..1243899 FT /note="Pfam match to entry PF01595 DUF21, Domain of unknown FT function DUF21, score 96.0, E-value 6.2e-26" FT misc_feature order(1243342..1243410,1243492..1243560,1243588..1243656, FT 1243690..1243758) FT /note="4 probable transmembrane helices predicted for FT BF0993 by TMHMM2.0 at aa 5-27, 55-77, 87-109 and 121-143" FT misc_feature 1243969..1244133 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 38.5, E-value 1.3e-08" FT misc_feature 1244140..1244301 FT /note="Pfam match to entry PF00571 CBS, CBS domain, score FT 34.5, E-value 2.1e-07" FT misc_feature 1244344..1244583 FT /note="Pfam match to entry PF03471 CorC_HlyC, Transporter FT associated domain, score 77.5, E-value 2.3e-20" FT CDS 1244707..1246845 FT /transl_table=11 FT /locus_tag="BF9343_0952" FT /old_locus_tag="BF0994" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron FT peptidyl-prolyl cis-trans isomerase BT4371 SWALL:AAO79476 FT (EMBL:AE016945) (712 aa) fasta scores: E(): 7.7e-207, FT 79.77% id in 712 aa, and to Chlorobium tepidum FT peptidyl-prolyl cis-trans isomerase, ppic-type CT0203 FT SWALL:Q8KFW7 (EMBL:AE012799) (700 aa) fasta scores: E(): FT 1.5e-10, 21.83% id in 742 aa, and to Acinetobacter sp. ADP1 FT putative peptidyl-prolyl cis-trans isomerase SWALL:O31248 FT (EMBL:AJ002316) (622 aa) fasta scores: E(): 0.0025, 20.52% FT id in 687 aa" FT /db_xref="GOA:Q5LGK6" FT /db_xref="InterPro:IPR008880" FT /db_xref="UniProtKB/TrEMBL:Q5LGK6" FT /protein_id="CAH06733.1" FT /translation="MATLQNIRSKGPLLVIVIGLALFAFIAGDAWKVLQPHQSHDVGEV FT NGETLSAQDYQNMVEEYTEVIKFSSGMSSLNDEQTNQVKDEVWRSYVNNKLIEKEAKKL FT GITVSKAEIQSIINEGVNPLLQQTPFRNPQTGAFDKDMLKKFLADYSKMDKTKMPSQYV FT EYYEGMHKLWSFVEKTLIQSRLAEKYQALVTKALFSNPVEAQDAFDARVNQSDVLLAAV FT PYSSIVDSTITVKESELKDLYNKKKEQFKQYVETRNIKYIDVQVIASAEDRAAIQQEVT FT DYTNQLATANGDYTTFIRSTGSEYPYVDLYYTKKAFPSDVVARMDSASIGQVYGPYYNA FT GDNTINSFKVLSKVAAADSVQFRQIQVYTEDAAKTKALADSIYTAIKGGADFTALAKKY FT GQTGESNWISSANYENAQVDGDNLKFISTINNLGVNELSNVALGQGNIILQVTDKKAVK FT DKYKVAVIKRAVEFSKETYNKAYNEFSQFIAANPTVDKVAANAEESGYKLLERNDLYSS FT EHGIGGIRGTKEALKWAFAAKPGEVSGLYECGESDRMLVVGLVSVIEEGYRPLAQVQDQ FT LRAEIIRDKKAEKIMADMKAANATTIAQYTSMANAVSDSVKHVTFAAPAYVAALRSSEP FT LVGAYASVSDINKLSAPIKGNGGVFVLQVYAKDKLNETFDAQSEEATLENMHARLASRF FT MNDLYLKGDVKDKRYLFF" FT misc_feature 1244707..1244787 FT /note="Signal peptide predicted for BF0994 by SignalP 2.0 FT HMM (Signal peptide probability 0.913) with cleavage site FT probability 0.447 between residues 27 and 28" FT misc_feature 1244743..1244799 FT /note="1 probable transmembrane helix predicted for BF0994 FT by TMHMM2.0 at aa 13-31" FT CDS 1247022..1248056 FT /transl_table=11 FT /locus_tag="BF9343_0953" FT /old_locus_tag="BF0995" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4372 SWALL:AAO79477 (EMBL:AE016945) FT (345 aa) fasta scores: E(): 2.4e-112, 84.01% id in 344 aa, FT and to Thermotoga maritima hypothetical protein Tm1715 FT SWALL:Q9X240 (EMBL:AE001811) (343 aa) fasta scores: E(): FT 1.4e-40, 38.43% id in 333 aa, and to Aquifex aeolicus FT hypothetical protein Aq_416 SWALL:O66732 (EMBL:AE000689) FT (348 aa) fasta scores: E(): 2.5e-40, 37.5% id in 336 aa" FT /db_xref="GOA:Q5LGK5" FT /db_xref="InterPro:IPR004383" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR023404" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGK5" FT /protein_id="CAH06734.1" FT /translation="MPKYPLLGMTLTELQSVTKDLGMPAFAAKQIASWLYDKKVTSIDE FT MTNLSLKHRELLKGEYDLGISAPVDEMRSVDGTVKYLYQVSDNHFVEAVYIPDEDRATL FT CVSSQVGCKMNCKFCMTGKQGFTASLTANQILNQIAALPERDKLTNVVMMGMGEPLDNL FT DEVLKALHILTASYGYGWSPKRITLSSVGLRKGLQRFIEESECHLAISLHSPFPSQRSE FT LMPAERAFSIKEMVDLLKNYDFSKQRRLSFEYIVFKGVNDSLIYAKELLKLLRGLDCRV FT NLIRFHAIPGVDLEGAGMETMTSFRDYLTSHGLFTTIRASRGEDIFAACGMLSTAKQEE FT SNKN" FT misc_feature 1247337..1247834 FT /note="Pfam match to entry PF04055 Radical_SAM, Radical SAM FT superfamily, score 71.3, E-value 1.7e-18" FT CDS 1248131..1249177 FT /transl_table=11 FT /locus_tag="BF9343_0954" FT /old_locus_tag="BF0996" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4373 SWALL:Q89ZK4 (EMBL:AE016945) (345 aa) fasta FT scores: E(): 1.2e-102, 72.77% id in 349 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGK4" FT /protein_id="CAH06735.1" FT /translation="MKKYLFYLSMALVAVVLFSCKSGKKSVFTPTSSGRAYEVLVVVEK FT PVWERPAGRALYNVLDTDVPGLPQSERSFRIMSTSPKDFDAILKLVRNIIIVDIQDIYT FT QPKFKYAKDVYASPQMILTIQAPDEASFEKFVEENKQPIIDFFTRAEMNRQISFLEKNH FT NDYISTKVGSMFNSDIWLPAELSSSKTGEDFFWAGTNAATGDQNFVIYSYPYTDKDTFT FT KEFFIHKRDSVMKANIPGAKEGMYMATDSSTVEVRPIDIHGDYTMEARGLWRIKGDFMG FT GPFVSHTRLDKASHRIITTEVFIYSPDKMKRDLMRRLEASLYTLQLPTEKAQEQIPMGI FT EQEEKTNK" FT CDS 1249182..1250279 FT /transl_table=11 FT /locus_tag="BF9343_0955" FT /old_locus_tag="BF0997" FT /product="putative 4-hydroxythreonine-4-phosphate FT dehydrogenase" FT /note="Similar to Escherichia coli FT 4-hydroxythreonine-4-phosphate dehydrogenase PdxA or B0052 FT SWALL:PDXA_ECOLI (SWALL:P19624) (329 aa) fasta scores: E(): FT 6.3e-33, 36.06% id in 330 aa, and to Bacteroides FT thetaiotaomicron 4-hydroxythreonine-4-phosphate FT dehydrogenase BT4374 SWALL:AAO79479 (EMBL:AE016945) (364 FT aa) fasta scores: E(): 2.2e-124, 87.36% id in 364 aa, and FT to Oceanobacillus iheyensis 4-hydroxythreonine-4-phosphate FT dehydrogenase PdxA or ob1013 SWALL:Q8CUU4 (EMBL:AP004596) FT (332 aa) fasta scores: E(): 1.7e-37, 38.88% id in 324 aa" FT /db_xref="GOA:Q5LGK3" FT /db_xref="InterPro:IPR005255" FT /db_xref="UniProtKB/TrEMBL:Q5LGK3" FT /protein_id="CAH06736.1" FT /translation="MEDNKIKIGITQGDINGVGYEVILKTFADPVMLELCTPVIYGSPK FT VAAYHRKSLDLPTNFSIVNTAAEAAHNRLSVVNCTDDEVKVEFSKPDPEAGKAALGALE FT KAIEEFREGLIDVIVTAPINKHTIQSEGFAFPGHTEYIEQRLGNGSKSLMILMKEDFRV FT ALVTGHIPVREIASSITKELIQEKLAIFNRSLKQDFGIGAPRIAVLALNPHAGDDGLLG FT TEEQEIISPAIQEMAAKGILCYGPYPADGFMGSGNFTHFDGVLAMYHDQGLAPFKALAM FT DEGVNYTAGLPVIRTSPAHGTAYDIAGKGVACEDSFRQAIYVAIDVFRNRQREKEAHAN FT PLRKQYYEKRDDSDKLKLDTVDDDI" FT misc_feature 1249263..1250156 FT /note="Pfam match to entry PF04166 PdxA, Pyridoxal FT phosphate biosynthetic protein PdxA, score 332.3, E-value FT 4.8e-97" FT CDS 1250304..1251530 FT /transl_table=11 FT /locus_tag="BF9343_0956" FT /old_locus_tag="BF0998" FT /product="putative sigma-54 dependent transcriptional FT regulator" FT /note="Similar to Myxococcus xanthus transcriptional FT regulatory SasR SWALL:Q9EZZ3 (EMBL:AF273214) (477 aa) fasta FT scores: E(): 2e-38, 44.04% id in 277 aa, and to Bacteroides FT thetaiotaomicron transcriptional regulator BT4375 FT SWALL:AAO79480 (EMBL:AE016945) (413 aa) fasta scores: E(): FT 2.3e-126, 87.68% id in 414 aa, and to Porphyromonas FT gingivalis immunoreactive 47 kDa antigen PG120 SWALL:Q9X6S7 FT (EMBL:AF144640) (417 aa) fasta scores: E(): 3.4e-81, 57.51% FT id in 419 aa" FT /db_xref="GOA:Q5LGK2" FT /db_xref="InterPro:IPR002078" FT /db_xref="InterPro:IPR002197" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR020441" FT /db_xref="UniProtKB/TrEMBL:Q5LGK2" FT /protein_id="CAH06737.1" FT /translation="MTKAEIQQVKLRFGIIGNTEALTRAIDVAIQVAPTDLSVLITGES FT GVGKESFPQIIHQYSRRKHGQYIAVNCGAIPEGTIDSELFGHEKGAFTGAIGERKGYFG FT EADGGTIFLDEVGELPLPTQARLLRVLESGEFIKVGSSKVQKTDVRIVAATNVNLTQAI FT AEGRFREDLYYRLNTVPIQIPPLRERGEDVLLLFRKFASDFAEKYRMPAIQLTEDAKRV FT LLSYSWPGNVRQLKNITEQISIIETNREINAPILQSYLPAQSTQRLPALFGVKTGKSFE FT SEREILYQVLFDMRQDVTELKKLVHEIMSERGAVTSNVGTFYTPAPVVAPTPSVPAIIH FT PVKPNCPDDDDIQDTEEYVEESLSLDEVEKEMIRKALEKHHGKRKSAAKDLNISERTLY FT RKIKEYGLE" FT misc_feature 1250346..1251011 FT /note="Pfam match to entry PF00158 Sigma54_activat, FT Sigma-54 interaction domain, score 437.3, E-value 1.2e-128" FT misc_feature 1250418..1250459 FT /note="PS00675 Sigma-54 interaction domain ATP-binding FT region A signature." FT misc_feature 1250604..1250651 FT /note="PS00676 Sigma-54 interaction domain ATP-binding FT region B signature." FT misc_feature 1250985..1251014 FT /note="PS00688 Sigma-54 interaction domain C-terminal part FT signature." FT misc_feature 1251396..1251518 FT /note="Pfam match to entry PF02954 HTH_8, Bacterial FT regulatory protein, Fis family, score 63.4, E-value FT 4.2e-16" FT misc_feature 1251447..1251512 FT /note="Predicted helix-turn-helix motif with score FT 1892.000, SD 5.63 at aa 382-403, sequence FT GKRKSAAKDLNISERTLYRKIK" FT CDS 1251517..1252038 FT /transl_table=11 FT /locus_tag="BF9343_0957" FT /old_locus_tag="BF0999" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4376 SWALL:AAO79481 (EMBL:AE016945) (175 aa) FT fasta scores: E(): 1.9e-52, 82.28% id in 175 aa" FT /db_xref="GOA:Q5LGK1" FT /db_xref="UniProtKB/TrEMBL:Q5LGK1" FT /protein_id="CAH06738.1" FT /translation="MDWNKKIMRISLLVFTLVVGISCTVSYKFNGGNINYDKVKTISIA FT DFPIKSDYVYAPLGTKFNEDLKDIFLRQTRLKLVNNNADLEIDGEITGYNQYNQAVSAD FT GYSSETKLTITVNVRFVNNTNHEQDFEQQFSAFRVYDSRELLTAVQDGLIAEMTKEITD FT QIFNATVANW" FT misc_feature 1251517..1251600 FT /note="Signal peptide predicted for BF0999 by SignalP 2.0 FT HMM (Signal peptide probability 0.791) with cleavage site FT probability 0.454 between residues 28 and 29" FT misc_feature 1251544..1251612 FT /note="1 probable transmembrane helix predicted for BF0999 FT by TMHMM2.0 at aa 10-32" FT misc_feature 1251553..1251585 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS 1252044..1252799 FT /transl_table=11 FT /locus_tag="BF9343_0958" FT /old_locus_tag="BF1000" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4377 SWALL:AAO79482 (EMBL:AE016945) (264 aa) FT fasta scores: E(): 5.8e-41, 68.42% id in 266 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGK0" FT /protein_id="CAH06739.1" FT /translation="MISANLQQWIQHPETLNKDTLYELRTLVTRYPYFQSLRLLYLKNL FT YLLHDISFGAELRKAILHVADRRKLFYLIEGERYILKPRKKNALPETEVLEEEPSLDRT FT LSLIDAFLATVPEEVSAQTSLDYATDYTTYLLQEDDTPELEETPKLRGHELIDGFIERS FT EEETSIRLQPADENKAISEEEESETQHEEDEDDSCFTETLAKIYVKQHRYSKALEIIKK FT LSLKYPKKNAYFADQIRFLEKLIINAKSK" FT CDS 1252804..1253184 FT /transl_table=11 FT /locus_tag="BF9343_0959" FT /old_locus_tag="BF1001" FT /product="possible protein-export transmembrane protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4378 SWALL:AAO79483 (EMBL:AE016945) (131 aa) FT fasta scores: E(): 2.4e-33, 81.25% id in 128 aa, and to FT Chlorobium tepidum hypothetical protein CT0737 SWALL:Q8KEF2 FT (EMBL:AE012844) (126 aa) fasta scores: E(): 5.5e-06, 34.92% FT id in 126 aa, and to Campylobacter jejuni hypothetical FT protein SecG or CJ0235C SWALL:Q9PIQ9 (EMBL:AL139074) (123 FT aa) fasta scores: E(): 0.00049, 29.06% id in 117 aa, and to FT Helicobacter pylori J99 protein-export membrane protein FT SecG or jhp1176 SWALL:SECG_HELPJ (SWALL:Q9ZJX2) (198 aa) FT fasta scores: E(): 0.004, 23.96% id in 121 aa" FT /db_xref="GOA:Q5LGJ9" FT /db_xref="InterPro:IPR004692" FT /db_xref="UniProtKB/TrEMBL:Q5LGJ9" FT /protein_id="CAH06740.1" FT /translation="MYLLLVILMVIAAILMCFIVLIQNSKGGGLASGFSSSNQIMGVRK FT TTDFLEKATWGLAAFMVVMSIATAYVVPTSSSKTQDVIMEQAQQEEQTNPYNLPVGTTA FT PKTDAAAPVEAPATETPATPAN" FT misc_feature 1252804..1252884 FT /note="Signal peptide predicted for BF1001 by SignalP 2.0 FT HMM (Signal peptide probability 0.880) with cleavage site FT probability 0.275 between residues 27 and 28" FT misc_feature 1252807..1253022 FT /note="Pfam match to entry PF03840 SecG, Preprotein FT translocase SecG subunit, score 60.1, E-value 4.1e-15" FT misc_feature order(1252807..1252875,1252960..1253028) FT /note="2 probable transmembrane helices predicted for FT BF1001 by TMHMM2.0 at aa 2-24 and 53-75" FT CDS 1253355..1254743 FT /transl_table=11 FT /locus_tag="BF9343_0960" FT /old_locus_tag="BF1002" FT /product="putative transmembrane transporter" FT /note="C-terminus has limited similarity to the N-terminus FT of Oryza sativa major facilitator superfamily antiporter FT MFS2 SWALL:Q8H6D5 (EMBL:AF543419) (470 aa) fasta scores: FT E(): 0.0091, 25.44% id in 224 aa, and entire protein is FT similar to Bacteroides thetaiotaomicron putative FT oxalate:formate antiporter BT4379 SWALL:AAO79484 FT (EMBL:AE016945) (462 aa) fasta scores: E(): 6.8e-170, FT 90.47% id in 462 aa, and to Drosophila melanogaster Cg8602 FT protein cg8602 SWALL:Q9VS47 (EMBL:AE003559) (478 aa) fasta FT scores: E(): 4.4e-25, 27.61% id in 402 aa" FT /db_xref="GOA:Q5LGJ8" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:Q5LGJ8" FT /protein_id="CAH06741.1" FT /translation="MTEQLKNKLSDSKTLRWSVLALVAFTMLCGYFLTDVMSPLKPMLE FT KELLWDSLDYGFFTSAYGWFNVFLLMLIFGGIILDKMGVRFTGMGACILMVLGCGLKYY FT AISTTFPEGALIMGFKTQVFLAALGYAIFGVGVEIAGITVSKIIVKWFKGKEMALAMGL FT EMATARIGTTLAMVLTVPIADYFGYTDESGSFHTNIPMPILLCLIMLCIGTIAFFIYTF FT YDKKLDASLDAQGEEPEEPFRMKDVMLIVTNKGFWLIALLCVLFYSAVFPFIKYATDLM FT VQKYNVDPKLAGNIPGLLPIGTIFLTPLFGTLYDRIGKGATLMIIGAVMLIGVHTLFAL FT PILNVWWFATVIMIVLGIAFSLVPSAMWPSVPKIIPEKQLGTAYALIFWVQNWGLMGVP FT LLIGWVLNTYCKGPVVDGAQTYDYTLPMAIFACFGVLALIVALMLKAEDKKKGYGLQEA FT NIKK" FT misc_feature 1253355..1253456 FT /note="Signal peptide predicted for BF1002 by SignalP 2.0 FT HMM (Signal peptide probability 0.818) with cleavage site FT probability 0.768 between residues 34 and 35" FT misc_feature order(1253403..1253456,1253523..1253591,1253610..1253678, FT 1253721..1253789,1253850..1253918,1253946..1254014, FT 1254117..1254185,1254228..1254296,1254315..1254383, FT 1254396..1254464,1254501..1254569,1254627..1254686) FT /note="12 probable transmembrane helices predicted for FT BF1002 by TMHMM2.0 at aa 17-34, 57-79, 86-108, 123-145, FT 166-188, 198-220, 255-277, 292-314, 321-343, 348-370, FT 383-405 and 425-444" FT CDS 1254750..1255103 FT /transl_table=11 FT /locus_tag="BF9343_0961" FT /old_locus_tag="BF1003" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4380 SWALL:AAO79485 (EMBL:AE016945) FT (115 aa) fasta scores: E(): 7e-28, 67.56% id in 111 aa, and FT to Thermoanaerobacter tengcongensis hypothetical protein FT TTE0160 SWALL:Q8RD86 (EMBL:AE012989) (114 aa) fasta scores: FT E(): 7.6e-05, 33.64% id in 107 aa" FT /db_xref="InterPro:IPR008792" FT /db_xref="UniProtKB/TrEMBL:Q5LGJ7" FT /protein_id="CAH06742.1" FT /translation="MADVKEKINLLDVIPFRSENITAEKGSDGTVTIAFPRFKYEWMRR FT FLLPKGMSADIHVRLEDHGTAVWELIDGKRTVRRIIEELAEHFNYEENYESRITAYITQ FT LQKDGFVKLVIEN" FT CDS complement(1255237..1256292) FT /transl_table=11 FT /locus_tag="BF9343_0962" FT /old_locus_tag="BF1004" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4382 SWALL:AAO79487 (EMBL:AE016945) (354 aa) FT fasta scores: E(): 2e-90, 75.14% id in 354 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGJ6" FT /protein_id="CAH06743.1" FT /translation="MKKLIILTGLLLSTSAYAQTEVTAGVTRGKDYGVTYALPKTAINI FT EVKVNKVTYTPGEFSKYADRYLRLTDVSGEPQEYWELVSVKAKSVGIPDSEHTYFVKLK FT DKTVAPLIELTEDGIVKSINVPLSPKKSAPMQPATTQKKKINPRDFLTEEILMAGSTAK FT MAELVAKEIYNIRESKNALVRGQADNMPKDGEQLKIMLANLEEQEAAMTEMFSGTLNKD FT EKIFNIRLTPDKEMDNEVAFRFSKKLGIVANNDLAGEPVYITLKNLKTVNVPEDDGKKK FT VDGIAYNVPGKAQVTLTEGKKQWFNGELPVTQFGTIEYLAPALFNKKSTVQVTFNPDTG FT GLIKVDREEGE" FT misc_feature complement(1255285..1255350) FT /note="Predicted helix-turn-helix motif with score FT 1012.000, SD 2.63 at aa 315-336, sequence FT GTIEYLAPALFNKKSTVQVTFN" FT misc_feature complement(1256239..1256292) FT /note="Signal peptide predicted for BF1004 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.989 between residues 18 and 19" FT CDS complement(1256365..1257876) FT /transl_table=11 FT /locus_tag="BF9343_0963" FT /old_locus_tag="BF1005" FT /product="putative YjeF-related sugar kinase" FT /note="Similar to Bacteroides thetaiotaomicron putative FT sugar kinase BT4383 SWALL:AAO79488 (EMBL:AE016945) (503 aa) FT fasta scores: E(): 6.5e-169, 83.89% id in 503 aa, and to FT Thermoanaerobacter tengcongensis predicted sugar kinase FT TTE2170 SWALL:Q8R858 (EMBL:AE013164) (512 aa) fasta scores: FT E(): 2.1e-51, 35.07% id in 516 aa, and to Clostridium FT tetani conserved protein CTC02515 SWALL:AAO36976 FT (EMBL:AE015944) (502 aa) fasta scores: E(): 5.9e-50, 33.86% FT id in 505 aa" FT /db_xref="GOA:Q5LGJ5" FT /db_xref="InterPro:IPR000631" FT /db_xref="InterPro:IPR004443" FT /db_xref="InterPro:IPR017953" FT /db_xref="UniProtKB/TrEMBL:Q5LGJ5" FT /protein_id="CAH06744.1" FT /translation="MKIFPSSSIKKLDAYTIEHEPIASIDLMERAAQALTKAITERWDI FT TTPVTVFAGPGNNGGDALAVARMLAEKEYKVEAYLFNPKGELSADCQTNKELVEMMDNV FT KFSEVSTQFVPPTLTMDHLVVDGLFGSGLNKPLSGGFAAVVKYINASPATVVAIDIPSG FT LMGEENTFNVKANIIRAQLTLSLQLPKLAFLFAENSEFVGEWKLLDINLSREAIEETES FT NYALLEAEEIHALIKPRNTFSHKGNFGHALLIAGSYGMAGASILAARACMRSGVGLLTV FT HAPIRNNDILQISVPEAIIESDASDTYFACPTDTDDYQAVGIGPGIGRSEETEAALLEQ FT LSGCQTPLVLDADALNILANHRHALTTLPKGSILTPHPKELERMVGKCQNSYERLMKAC FT ELARTAKVHIILKGAYSAIITPSGKCYFNSTGNPGMATAGSGDVLTGVVLALLAQGYPA FT EEAAKIGTYVHGLAGDFARKKQGVISMTAGDIISNLPLAWRLVSE" FT misc_feature complement(1256389..1257126) FT /note="Pfam match to entry PF01256 carb_kinase, FT Carbohydrate kinase, score 204.0, E-value 2e-58" FT misc_feature complement(1256533..1256565) FT /note="PS01050 Uncharacterized protein family UPF0031 FT signature 2." FT misc_feature complement(1257301..1257819) FT /note="Pfam match to entry PF03853 YjeF_N, YjeF-related FT protein N-terminus, score 120.9, E-value 2e-33" FT CDS complement(1257920..1259260) FT /transl_table=11 FT /locus_tag="BF9343_0964" FT /old_locus_tag="BF1006" FT /product="putative transmembrane protein" FT /note="Identical to previously sequenced Bacteroides FT fragilis hypothetical 35.7 kDa protein SWALL:Q9XDL0 FT (EMBL:AF048749) (322 aa) fasta scores: E(): 2.1e-117, 100% FT id in 322 aa, and similar to previously sequenced FT Bacteroides fragilis hypothetical 48.4 kDa protein WcfT FT SWALL:Q9F767 (EMBL:AF285774) (427 aa) fasta scores: E(): FT 2.5e-49, 34.41% id in 401 aa, and to Caulobacter crescentus FT hypothetical protein Cc0651 SWALL:Q9AAF0 (EMBL:AE005741) FT (436 aa) fasta scores: E(): 6.2e-45, 34.69% id in 415 aa" FT /db_xref="GOA:Q5LGJ4" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:Q5LGJ4" FT /protein_id="CAH06745.1" FT /translation="MNNVQQVKTYSQRKISDFLFILWAGGAALLSYSLVYALRKPYTAA FT GFDGLEAFGMDYKVVVTIAQILGYVLSKFIGIKLISELKRENRMKFILISIILAEASLI FT LFGLLPAPYNTGAMFLNGLSLGCMWGIIFSFIEGRRMTDILASLLGVSMVISSGTAKSA FT GLYVMDTLNVSEFWMPALIGGVALPLLALLGYALNRLPQPTAEDIAMKSKRETLNGKQR FT WELFKNFMPFLTLLFIANVVLTILRDIKEDFLVKIIDVSQYSSWMFAQVDSVVTLIILI FT IFGLMVFVRSNLKALSILLGLIIASMVVMAVVSFGYEQLQLNAIVWLFIQSLCLYLAFL FT TFQTIFFDRFIACFKIRGNVGFFIAMNDFLGYTGTVIVLAVKEFFSPDINWTAFYNLMA FT GYVGIICFVAFVCSFIYLHQRYRRENYGKTGVFRKKEEEKEVPDFVY" FT misc_feature complement(order(1258007..1258075,1258118..1258186, FT 1258220..1258288,1258316..1258375,1258394..1258462, FT 1258520..1258588,1258667..1258735,1258763..1258831, FT 1258850..1258918,1258931..1258990,1259048..1259104, FT 1259147..1259206)) FT /note="12 probable transmembrane helices predicted for FT BF1006 by TMHMM2.0 at aa 19-38, 53-71, 91-110, 115-137, FT 144-166, 176-198, 225-247, 267-289, 296-315, 325-347, FT 359-381 and 396-418" FT misc_feature complement(1259150..1259260) FT /note="Signal peptide predicted for BF1006 by SignalP 2.0 FT HMM (Signal peptide probability 0.708) with cleavage site FT probability 0.453 between residues 37 and 38" FT CDS 1259566..1260201 FT /transl_table=11 FT /locus_tag="BF9343_0965" FT /old_locus_tag="BF1007" FT /product="putative methyltransferase" FT /note="Similar to Streptomyces sp. TP-A0274 FT methyltransferase StamB SWALL:BAC55218 (EMBL:AB088119) (280 FT aa) fasta scores: E(): 1.2e-07, 37.62% id in 101 aa, and FT identical to previously sequenced Bacteroides fragilis FT putative methyl transferase SWALL:Q9XDK9 (EMBL:AF048749) FT (211 aa) fasta scores: E(): 3.9e-89, 100% id in 211 aa, and FT similar to Bacteroides thetaiotaomicron putative methyl FT transferase BT1855 SWALL:AAO76962 (EMBL:AE016933) (209 aa) FT fasta scores: E(): 6e-53, 62.31% id in 207 aa" FT /db_xref="GOA:Q5LGJ3" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:Q5LGJ3" FT /protein_id="CAH06746.1" FT /translation="MNKRGFVSRILQNFRKPEGFFGRMILWGMNTGHASLAQWGMSCLQ FT WQPEWSVLDIGCGGGANLLQILQRCPQGKAYGIDISPESVTFARKKNKKYLGTRCFIEQ FT GGVHRLPYPDYAFDAVTAFETVYFWGNLQHAFTEVARVLKPGGSFLICCEISDPANKAW FT TGLVEGMEIHSCDELKAILSKSGFTDTAIFRTKKEELCLVSHRQTVRL" FT CDS 1260915..1261433 FT /transl_table=11 FT /gene="upcY" FT /locus_tag="BF9343_0966" FT /old_locus_tag="BF1009" FT /product="putative transcriptional regulator" FT /note="Similar to Bacteroides fragilis hypothetical 12.8 FT kDa protein SWALL:Q9XDK8 (EMBL:AF048749) (113 aa) fasta FT scores: E(): 1.1e-41, 100% id in 113 aa, and to Bacteroides FT thetaiotaomicron putative transcriptional regulator BT0376 FT SWALL:AAO75483 (EMBL:AE016927) (192 aa) fasta scores: E(): FT 4.9e-14, 43.47% id in 115 aa, and to Bacteroides FT thetaiotaomicron putative transcriptional regulator BT1725 FT SWALL:AAO76832 (EMBL:AE016933) (192 aa) fasta scores: E(): FT 1e-13, 43.36% id in 113 aa" FT /db_xref="GOA:Q5LGJ2" FT /db_xref="InterPro:IPR006645" FT /db_xref="UniProtKB/TrEMBL:Q5LGJ2" FT /protein_id="CAH06747.1" FT /translation="METTDSDKHWYVVLTRTNSERKVRDYFQLQEVDTFLPVQNRVIER FT EGKRIERERLLLPRMVFVHISRQEMAAVRSTLNVYDFLRDRSTGAPTCIPDAQMADFRY FT MLDYSQDQVILTGESIPKGTRVVVAKGDLQGLRGELVRYNNKYHILVRIDMFGSAMVTI FT PASYVRKEK" FT misc_feature 1260915..1277396 FT /note="PS_8/PS_C non-variable operon; lipopolysaccharide FT biosynthesis locus" FT /note="label: PS_C" FT CDS 1261616..1262008 FT /transl_table=11 FT /gene="upcZ" FT /locus_tag="BF9343_0967" FT /old_locus_tag="BF1010" FT /product="putative transcriptional regulator" FT /note="Similar to Bacteroides fragilis putative FT transcriptional regulator UpcZ SWALL:Q9XDK7 (EMBL:AF048749) FT (130 aa) fasta scores: E(): 7.4e-46, 100% id in 130 aa, and FT to Bacteroides fragilis UpcZ SWALL:Q9RGK5 (EMBL:AF125164) FT (130 aa) fasta scores: E(): 8.6e-46, 99.23% id in 130 aa, FT and to Bacteroides fragilis UpaZ SWALL:Q93QW5 FT (EMBL:AF189282) (157 aa) fasta scores: E(): 9.4e-13, 39.16% FT id in 120 aa" FT /db_xref="InterPro:IPR010570" FT /db_xref="UniProtKB/TrEMBL:Q5LGJ1" FT /protein_id="CAH06748.1" FT /translation="MKNSLCNSVSSVVKKLLEYGEDGTPVYVNELTALNQELRNLCADL FT LLQKGESPEEEAEILVTLFKGYDTMLFNFSSENEQVIQELLDRSMTVLEKLPASVLKCQ FT LLLECFEQTGDEELIREAKKNIERVI" FT CDS 1262011..1262898 FT /transl_table=11 FT /gene="rmlA2" FT /locus_tag="BF9343_0968" FT /old_locus_tag="BF1011" FT /product="glucose-1-phosphate thymidyl transferase" FT /note="Identical to previously sequenced Bacteroides FT fragilis glucose-1-phosphate thymidyl transferase RmlA FT SWALL:Q9XDK6 (EMBL:AF048749) (295 aa) fasta scores: E(): FT 1.5e-114, 100% id in 295 aa, and similar to previously FT sequenced Bacteroides fragilis glucose-1-phosphate FT thymidyltransferase RmlA SWALL:Q9RGK4 (EMBL:AF125164) (294 FT aa) fasta scores: E(): 5.4e-106, 92.17% id in 294 aa, and FT to Bacteroides thetaiotaomicron glucose-1-phosphate FT thymidylyltransferase BT0463 SWALL:AAO75570 (EMBL:AE016927) FT (295 aa) fasta scores: E(): 7.8e-102, 88.81% id in 295 aa" FT /db_xref="GOA:Q5LGJ0" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR005907" FT /db_xref="UniProtKB/TrEMBL:Q5LGJ0" FT /protein_id="CAH06749.1" FT /translation="MKGIVLAGGSGTRLYPITKGVSKQLLPIFDKPMIYYPISVLMLAG FT IREILIISTPDDLPGFQRLLGDGSDFGVRFEYAEQPSPDGLAQAFIIGEKFIGDDSVCL FT VLGDNIFYGQGFTRMLNEAVRIAESESKATVFGYWVSDPERYGVAEFDENGNVFSIEEK FT PQKPKSNYAVVGLYFYPNKVVEVAKSIRPSSRGELEITTVNQNFLSDKELRVQLLGRGF FT AWLDTGTHDSLSEASTFIEVIEKRQGLKVACLEGIALRKGWISPEKMKALAQPMLKNQY FT GQYLLKVIDELYVK" FT misc_feature 1262014..1262739 FT /note="Pfam match to entry PF00483 NTP_transferase, FT Nucleotidyl transferase, score 360.8, E-value 1.3e-105" FT CDS 1262914..1263462 FT /transl_table=11 FT /gene="rmlC1" FT /locus_tag="BF9343_0969" FT /old_locus_tag="BF1012" FT /product="dTDP-6-deoxy-D-glucose-3,5 epimerase" FT /note="Identical to previously sequenced Bacteroides FT fragilis dTDP-6-deoxy-D-glucose-3,5 epimerase RmlC FT SWALL:Q9XDK5 (EMBL:AF048749) (182 aa) fasta scores: E(): FT 1.8e-74, 100% id in 182 aa, and to Bacteroides FT thetaiotaomicron dTDP-4-dehydrorhamnose 3,5-epimerase FT BT1338 SWALL:AAO76445 (EMBL:AE016931) (182 aa) fasta FT scores: E(): 7.1e-62, 84.09% id in 176 aa, and to FT Bacteroides thetaiotaomicron dTDP-4-dehydrorhamnose FT 3,5-epimerase BT0464 SWALL:AAO75571 (EMBL:AE016927) (189 FT aa) fasta scores: E(): 9.7e-60, 82.38% id in 176 aa" FT /db_xref="GOA:Q5LGI9" FT /db_xref="InterPro:IPR000888" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/TrEMBL:Q5LGI9" FT /protein_id="CAH06750.1" FT /translation="MNIIKTAIEGLVILEPQLFKDDRGYFFESFNQREFEEKVCKTTFV FT QDNESKSSYGVIRGLHFQKPPFAQSKLVRVIKGAVLDVAVDIRKGSPTFGKHVSVELTE FT DNHRQFFIPRGFAHGFSVLSEEVIFQYKCDNFYHPEAEGAIAWNDPDLGIEWRVPCKSI FT ILSKKDRVHPLLKYIILFK" FT misc_feature 1262920..1263447 FT /note="Pfam match to entry PF00908 dTDP_sugar_isom, FT dTDP-4-dehydrorhamnose 3,5-epimerase, score 352.9, E-value FT 2.9e-103" FT CDS 1263481..1264002 FT /transl_table=11 FT /gene="wcfA" FT /locus_tag="BF9343_0970" FT /old_locus_tag="BF1013" FT /product="putative acetyl transferase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative acetyl transferase WcfA SWALL:Q9XDK4 FT (EMBL:AF048749) (173 aa) fasta scores: E(): 4.5e-69, 100% FT id in 173 aa, and to Lactococcus lactis acetyltransferase FT Ynca or ll1287 SWALL:Q9CG23 (EMBL:AE006361) (203 aa) fasta FT scores: E(): 1.1e-14, 41.09% id in 146 aa, and to FT Pasteurella multocida hypothetical protein Pm1056 pm1056 FT SWALL:Q9CLZ3 (EMBL:AE006146) (203 aa) fasta scores: E(): FT 4.3e-14, 46.45% id in 127 aa" FT /db_xref="GOA:Q5LGI8" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:Q5LGI8" FT /protein_id="CAH06751.1" FT /translation="MKKLVYDVRKDIIPWNSRITRILFFLNKIPYLRLFSKPLLRKQFN FT LSNTVQFNSGFFCHAPKLKCGNYVGLSDTFILAYADVVIGNNVSFSFRNMLITSTHDVN FT DFNKIIASSIVIGNNVWITSNVIILAGVKIGDNTIIGAGSVVTHDIPANVFAAGNPCRV FT IKSIRFNKNE" FT misc_feature 1263721..1263744 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 2.2, E-value FT 12" FT misc_feature 1263817..1263870 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 11.9, FT E-value 1.3" FT misc_feature 1263871..1263924 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 19.9, FT E-value 0.005" FT CDS 1263995..1265530 FT /transl_table=11 FT /gene="wzx2" FT /locus_tag="BF9343_0971" FT /old_locus_tag="BF1014" FT /product="putative O-antigen flippase" FT /note="Similar to Escherichia coli O-antigen flippase Wzx FT SWALL:AAO39697 (EMBL:AY208937) (464 aa) fasta scores: E(): FT 0.00079, 19.65% id in 468 aa, and to previously sequenced FT Bacteroides fragilis putative flippase Wzx SWALL:Q9XDK3 FT (EMBL:AF048749) (511 aa) fasta scores: E(): 8.6e-198, 100% FT id in 511 aa, and to Bacteroides thetaiotaomicron putative FT flippase BT1354 SWALL:AAO76461 (EMBL:AE016931) (513 aa) FT fasta scores: E(): 2.5e-110, 52.83% id in 511 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGI7" FT /protein_id="CAH06752.1" FT /translation="MNNSRTAKGLKNAQVALLFYFINLILSFLSRKAFIEHLGAEVLGL FT NTTLTNILVYLNLAELGIGYAISYALYKPLYEGDKQAVNEIISIQGWLYKRIAIIVIIM FT SGVILLFFPLFFAKIEIPIWYVYATFLVLLSSSIFSYFFNYKQFVLTADQKEYKLITNV FT QGFKVVKTILQIVVIVYFCNGYVWWLLLELLMGVITVFVLNSIVRKEYPWLQTSPKIGK FT DVKDKYPYIIKKTKQLFFHKIANVVLNQTSPIIIYSYTNLTMVAVYGNYMLIISGISLL FT INSVFSSIGAGIGNLVAEGNQAKIIQVFNELLSSRIWIVSILCFGVYQMSRPFIVLWVG FT DRFVLDDFYLLLMLLIAFISLTRLVDLFIAAYGLYQDVWAAILEAFLNLGLSILFGYYW FT GLSGILGGVIVSLVIIALLWKPFFLFKYGFNKNCLNFYFVYMKCVAFALITFYFSIRVI FT DYIGIGMCTDYSSWILISMLNIFVYTIISFPIFFFFSDGTNRFIKRVINIVFN" FT misc_feature order(1264031..1264099,1264142..1264210,1264283..1264342, FT 1264355..1264423,1264469..1264537,1264547..1264615, FT 1264706..1264774,1264817..1264885,1264943..1265011, FT 1265039..1265107,1265126..1265194,1265204..1265263, FT 1265300..1265368,1265411..1265479) FT /note="14 probable transmembrane helices predicted for FT BF1014 by TMHMM2.0 at aa 13-35, 50-72, 97-116, 121-143, FT 159-181, 185-207, 238-260, 275-297, 317-339, 349-371, FT 378-400, 404-423, 436-458 and 473-495" FT CDS 1265534..1266397 FT /transl_table=11 FT /gene="wcfB" FT /locus_tag="BF9343_0972" FT /old_locus_tag="BF1015" FT /product="putative fucosyl transferase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative fucosyl transferase WcfB SWALL:Q9XDK2 FT (EMBL:AF048749) (287 aa) fasta scores: E(): 1.3e-119, 100% FT id in 287 aa, and to Vibrio cholerae WblA protein FT SWALL:O87157 (EMBL:AB012957) (281 aa) fasta scores: E(): FT 5.7e-19, 32.74% id in 281 aa, and to Escherichia coli FT putative fucosyltransferase WbgN SWALL:Q8VQ46 FT (EMBL:AF461121) (290 aa) fasta scores: E(): 6.4e-12, 37.01% FT id in 181 aa" FT /db_xref="GOA:Q5LGI6" FT /db_xref="InterPro:IPR002516" FT /db_xref="UniProtKB/TrEMBL:Q5LGI6" FT /protein_id="CAH06753.1" FT /translation="MLYVILRGRLGNNLFQIATAASLTQNFIFCTVNKDQERQVLLYKD FT SFFKNIKVMKGVPDGIPYYKEPFHEFSRIPYEEGKDLIIDGYFQSEKYFKRSVVLDLYR FT ITDELRKKIWNICGNILEKGETVSIHVRRGDYLKLPHALPFCGKSYYKNAIQYIGEDKI FT FIICSDDIDWCKKNFIGKRYYFIENTTPLLDLYIQSLCTHNIISNSSFSWWGAWLNENS FT NKIVIAPQMWFGISVKLGVSDLLPVSWVRLPNNYTLGRYCFALYKVVEDYLLNILRLIW FT KRKKNM" FT misc_feature 1265534..1266292 FT /note="Pfam match to entry PF01531 Glyco_transf_11, FT Glycosyl transferase family 11, score 34.4, E-value FT 1.1e-10" FT misc_feature 1265957..1265980 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 1266373..1267533 FT /transl_table=11 FT /gene="wcfC" FT /locus_tag="BF9343_0973" FT /old_locus_tag="BF1016" FT /product="putative glycosyltransferase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative glycosyl transferase WcfC SWALL:Q9XDK1 FT (EMBL:AF048749) (386 aa) fasta scores: E(): 1.5e-151, 100% FT id in 386 aa, and to Clostridium acetobutylicum FT glycosyltransferase CAC2313 SWALL:Q97GQ3 (EMBL:AE007732) FT (377 aa) fasta scores: E(): 7.1e-24, 32.44% id in 336 aa, FT and to Bacillus halodurans hypothetical protein BH3712 FT BH3712 SWALL:Q9K6L7 (EMBL:AP001519) (395 aa) fasta scores: FT E(): 4.8e-10, 23.75% id in 362 aa" FT /db_xref="GOA:Q5LGI5" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q5LGI5" FT /protein_id="CAH06754.1" FT /translation="MEKKEEYVKKKMTLIVNHPWNDVFEGKDVFLVPCYIGKIYHYDVK FT IVFPSNYLYEAKTIRDVELVPVSYIKKLRPFSFVFGFKLMRYLFCNARKIDLFMRFHVT FT ITTAIMIIIYKMLNRNGIAYIKLDSNGVMNFEYKNNLKSLFRKLLYRRMFELVDFVSYE FT TKMGLENITQQTIGIDISSKLFYMPNGFDEDMIKHLDINVKEYSDKENVMITVGRLGTN FT QKNTELFLKAVENIDLKDWVIYLIGDIDPQNITFLEFVSNFFSNHPEKKKSVIFTGAIS FT DKRHLWEYYNKSKVFVLTSRCESYGLVLNEAKRFRNFIVSTNVGAFEDLVESGKYGCEI FT PQDNTDYLACILEKIILGQLDIDVYNDFSPESLSYYYQVKRMKLNN" FT misc_feature 1266661..1266714 FT /note="1 probable transmembrane helix predicted for BF1016 FT by TMHMM2.0 at aa 97-114" FT misc_feature 1266958..1267497 FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 50.4, E-value 3.5e-12" FT CDS 1267551..1268207 FT /transl_table=11 FT /gene="wcfD" FT /locus_tag="BF9343_0974" FT /old_locus_tag="BF1017" FT /product="putative acetyltransferase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative acetyl transferase WcfD SWALL:Q9XDK0 FT (EMBL:AF048749) (218 aa) fasta scores: E(): 2.5e-87, 100% FT id in 218 aa, and to Aeromonas hydrophila acetyl FT transferase SWALL:Q8KXE9 (EMBL:AF343089) (199 aa) fasta FT scores: E(): 5.1e-21, 45.34% id in 161 aa, and to Aeromonas FT hydrophila O-acetyl transferase SWALL:Q8KNM6 FT (EMBL:AF148126) (199 aa) fasta scores: E(): 6e-21, 45.34% FT id in 161 aa" FT /db_xref="GOA:Q5LGI4" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR018357" FT /db_xref="UniProtKB/TrEMBL:Q5LGI4" FT /protein_id="CAH06755.1" FT /translation="MIYYLFRPCLYVCKMFLNYFVCFTSKICTENRYNYFKRIKPFLFS FT RIVRTWFGHVGDKISIVPPFYIRGGKYIQLGTNFRALSGLRLEAIDFYNNSSYHPSIVI FT GDNVVFNNSCHIGATNRIIIGNDVVVASRVFITDHFHGNTTYNDLQIPVRNRLLYSKGP FT VVIGNNVWIGEGASILPNVTIGDNSIVAAHAVVTKNIPANSIAVGCPARIIRTIN" FT misc_feature 1267851..1267904 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 15.8, FT E-value 0.091" FT misc_feature 1267911..1267964 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 11.5, FT E-value 1.8" FT misc_feature 1268037..1268090 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 14.7, FT E-value 0.19" FT misc_feature 1268064..1268150 FT /note="PS00101 Hexapeptide-repeat containing-transferases FT signature." FT misc_feature 1268091..1268144 FT /note="Pfam match to entry PF00132 hexapep, Bacterial FT transferase hexapeptide (three repeats), score 15.7, FT E-value 0.094" FT CDS 1268208..1269314 FT /transl_table=11 FT /gene="wzy2" FT /locus_tag="BF9343_0975" FT /old_locus_tag="BF1018" FT /product="putative polysaccharide polymerase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative polymerase Wzy SWALL:Q9XDJ9 (EMBL:AF048749) (365 FT aa) fasta scores: E(): 1.9e-133, 99.18% id in 368 aa, and FT to Clostridium perfringens capsular polysaccharide FT biosynthesis protein CPE0478 SWALL:Q8XN60 (EMBL:AP003186) FT (355 aa) fasta scores: E(): 0.00013, 24.8% id in 379 aa, FT and to Shigella boydii O-antigen polymerase Wzy FT SWALL:Q93CS5 (EMBL:AF402314) (350 aa) fasta scores: E(): FT 0.00029, 23.67% id in 376 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGI3" FT /protein_id="CAH06756.1" FT /translation="MNLFVLLFVFVFGIIGSYSSKFSEKNLFWLFVIVLAIIIGGRSIS FT VPDTDQYLEFYQLTLSSSILDIPLYSYEIGFQLLTKILKLITNGSSFFYFGIIVLINSY FT FLFKSFSCFTDQSYPSKKSSGTLINQIKLQEFLLLYFSYWGLYYTGIVLRAGIAMSILI FT YLSTLLCSPYISLKKWSAIFLLAIISCSFHITALLGIIALIIFYISKKMTMRSYLLLFL FT LICIILFGKVSFWIVDMLDRNMPMIFSLIEDTDFAKLQAYSNIDASIKISFRFLFCLLI FT GLFFIICKRMPLYYYKYLNVYIVGLFLGALFSAIEAFSRIMDFFVIYSFILISMRLSTI FT NSFKIRFSIMFSIVLIQLLFVYRIIIGL" FT misc_feature order(1268217..1268267,1268286..1268345,1268460..1268528, FT 1268613..1268681,1268751..1268819,1268856..1268924, FT 1269018..1269071,1269090..1269158,1269168..1269227, FT 1269246..1269305) FT /note="10 probable transmembrane helices predicted for FT BF1018 by TMHMM2.0 at aa 4-20, 27-46, 85-107, 136-158, FT 182-204, 217-239, 271-288, 295-317, 321-340 and 347-366" FT CDS 1269311..1270186 FT /transl_table=11 FT /gene="wcfE" FT /locus_tag="BF9343_0976" FT /old_locus_tag="BF1019" FT /product="putative glycosyltransferase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative glycosyl transferase WcfE SWALL:Q9XDJ8 FT (EMBL:AF048749) (291 aa) fasta scores: E(): 3.3e-118, 100% FT id in 291 aa, and to Methanosarcina acetivorans FT glycosyltransferase ma2170 SWALL:Q8TNV8 (EMBL:AE010903) FT (350 aa) fasta scores: E(): 6.5e-08, 27.1% id in 214 aa, FT and to Archaeoglobus fulgidus glycosyl transferase af0321 FT SWALL:O29924 (EMBL:AE001082) (324 aa) fasta scores: E(): FT 8.2e-08, 26.8% id in 235 aa" FT /db_xref="GOA:Q5LGI2" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q5LGI2" FT /protein_id="CAH06757.1" FT /translation="MNNHIKRKAVSVVIVTFNSENLIMDCLDSIFKYNDISDDLEVVLV FT DNCSKNYLSMFGSIEEKYGNKVVLINNKVNGGYGQGNNLGVEVAKAPIILIMNPDVRLV FT KPIFKRILSLFERRNIAIAGMQQYESLLKRSQSFLMLREDLCSLFLYAVYTKINKFNEK FT YFCISGACFAVRKSVFTKVGMFDEQMFLYGEERMLHYKILRLGNYHIVYDSTIGYLHPK FT ENREFSSKNFLLGYHSFIYTCDKLGLDLHRSRNKMLNMYRFLEFYSWARGDKLKVKYYK FT EIIKLIKNNI" FT misc_feature 1269341..1269859 FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferase, score 80.4, E-value 3.1e-21" FT CDS 1270195..1271472 FT /transl_table=11 FT /gene="wcfF" FT /locus_tag="BF9343_0977" FT /old_locus_tag="BF1020" FT /product="putative UDP-glucose-6 dehydrogenase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative UDP-glucose-6 dehydrogenase WcfF SWALL:Q9XDJ7 FT (EMBL:AF048749) (425 aa) fasta scores: E(): 4.5e-161, 100% FT id in 425 aa, and to Escherichia coli putative FT udp-glucose-6-dehydrogenase wbqA SWALL:AAO39690 FT (EMBL:AY208937) (426 aa) fasta scores: E(): 4.4e-92, 53.27% FT id in 428 aa, and to Shigella sonnei ORF1s wbgt or ORF1G FT SWALL:Q9S0U5 (EMBL:AB028135) (437 aa) fasta scores: E(): FT 1.1e-91, 56.6% id in 424 aa" FT /db_xref="GOA:Q5LGI1" FT /db_xref="InterPro:IPR001732" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR014026" FT /db_xref="InterPro:IPR014027" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017476" FT /db_xref="UniProtKB/TrEMBL:Q5LGI1" FT /protein_id="CAH06758.1" FT /translation="MEELKIAVIGLGYVGLPLARLFSTKYECIGFDLNQSRVDALNSGH FT DMTLEVSDDLLRKALENGFKCTSNIDEISNCNFYVVAVPTPVDLNNRPDLTPLIGASTT FT VGKVISKGDIVVYESTVYPGVTEEECLPVVEEVSGLTYNVDFYAGYSPERINPGDKEHT FT VEKIKKVTSGSTPEIADIVDSVYNSVLVNGTHKAPSIKVAEASKIIENSQRDVNIAFMN FT ELSKIFNAMGIDTNDVIEAASSKWNFIKLKPGLVGGHCISVDPYYLIQKAQVYGVLPRI FT MSAARRLNDGMGDYVANQVIRLMNKKGILVKDSKILLLGFTFKEDCPDIRNTKVIDIYS FT TLHEYTSDITVYDAWANSAKVAHEYGISILTAGLDNLVGQFDAVVLCVGHKEFRHMNIR FT GFLRSDMGVVYDVKAVLSKDIIDGRL" FT misc_feature 1270204..1270767 FT /note="Pfam match to entry PF03721 UDPG_MGDP_dh_N, FT UDP-glucose/GDP-mannose dehydrogenase family, NAD binding FT domain, score 199.6, E-value 4.2e-57" FT misc_feature 1270792..1271076 FT /note="Pfam match to entry PF00984 UDPG_MGDP_dh, FT UDP-glucose/GDP-mannose dehydrogenase family, central FT domain, score 129.9, E-value 4.1e-36" FT misc_feature 1271143..1271430 FT /note="Pfam match to entry PF03720 UDPG_MGDP_dh_C, FT UDP-glucose/GDP-mannose dehydrogenase family, UDP binding FT domain, score 63.8, E-value 3.2e-16" FT CDS 1271459..1272592 FT /transl_table=11 FT /gene="wcfG" FT /locus_tag="BF9343_0978" FT /old_locus_tag="BF1021" FT /product="putative glycosyltransferase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative glycosyl transferase WcfG SWALL:Q9XDJ6 FT (EMBL:AF048749) (377 aa) fasta scores: E(): 3.9e-157, 100% FT id in 377 aa, and to Bacteroides fragilis putative FT glycosyltransferase wcgE SWALL:Q9RGJ7 (EMBL:AF125164) (363 FT aa) fasta scores: E(): 5.9e-09, 29.68% id in 219 aa, and to FT Bacteroides thetaiotaomicron putative glycosyltransferase FT BT2938 SWALL:AAO78044 (EMBL:AE016938) (408 aa) fasta FT scores: E(): 6.9e-08, 26.1% id in 249 aa" FT /db_xref="GOA:Q5LGI0" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q5LGI0" FT /protein_id="CAH06759.1" FT /translation="MADYNSSICCIFNIGTHYRNPIYSKMSSELPCDFYFGDRLLTPIK FT KMDYTQLNHFRSELHNKYLFSQFYWQSKSVRLVFKPYTYYVLDGEPYCLSSWVILFWAK FT LLNKRTVAWTHGWYGRESIVKKVIKKLFYSLFSELMVYGEYAISLMSKEGFDKSKMVCI FT ANSLDYDNQLKIRLNLSPSSIYSTHFSNSYPVLFYIGRVQKSKKLEYIIQAMDILKQKG FT FPVNLVVVGKDVDGVHLDCEIAKYNLGSHVWLYGPCYDEMRIGEMFYNADVCVSPGNVG FT LTAIHSLTYGCPVITHNNFPFQGPEFESIIQGKTGDFFQENDVNSLADTIQKWLSQNLH FT SREAIRQFAYQTIDTKWNLYYQMNILKQVFLKQAKDE" FT misc_feature 1271996..1272514 FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 58.4, E-value 1.4e-14" FT CDS 1272585..1273364 FT /transl_table=11 FT /gene="wcfH" FT /locus_tag="BF9343_0979" FT /old_locus_tag="BF1022" FT /product="putative deacetylase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative deacetylase WcfH SWALL:Q9XDJ5 (EMBL:AF048749) (259 FT aa) fasta scores: E(): 1.9e-113, 100% id in 259 aa, and to FT Leptospira interrogans polysaccharide deacetylase-like FT protein la1638 SWALL:Q8F5M9 (EMBL:AE011341) (287 aa) fasta FT scores: E(): 6.7e-08, 26.8% id in 235 aa" FT /db_xref="GOA:Q5LGH9" FT /db_xref="InterPro:IPR002509" FT /db_xref="InterPro:IPR011330" FT /db_xref="UniProtKB/TrEMBL:Q5LGH9" FT /protein_id="CAH06760.1" FT /translation="MNDFRSLIRNSVLDILGIFSRPQNGIHILNGHMICRGVANDQAKY FT YFSYQLKELSRHVRFIRVEEATSLILNHESVDEPLVAFTFDDGFMECHSMIAPVLEQFG FT VNAAFFINPNFANGDDVYIQNFTNNIVLTPGKTPMRWKEIRDLHERGHIIGAHTMDHYM FT INDSNWVELDKQIGCCKSVIEQELSTSCEYFAFPYGRLEHANQSSIDIACKYYKYVFSQ FT SDYKHYFSFGGRVINRRHFEPFWPVKHVSYFLSCHKK" FT misc_feature 1272801..1273241 FT /note="Pfam match to entry PF01522 Polysacc_deacet, FT Polysaccharide deacetylase, score 124.2, E-value 2.1e-34" FT CDS 1273404..1274642 FT /transl_table=11 FT /gene="wcfI" FT /locus_tag="BF9343_0980" FT /old_locus_tag="BF1023" FT /product="putative glycosyltransferase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative glycosyl transferase WcfI SWALL:Q9XDJ4 FT (EMBL:AF048749) (407 aa) fasta scores: E(): 3.2e-164, 99.5% FT id in 407 aa, and to Vibrio cholerae O37 FT glysosyl-transferase SWALL:Q8L354 (EMBL:AF390573) (409 aa) FT fasta scores: E(): 4.7e-22, 27.07% id in 325 aa, and to FT Rickettsia prowazekii hypothetical protein Rp336 rp336 FT SWALL:Q9ZDJ2 (EMBL:AJ235271) (407 aa) fasta scores: E(): FT 7.6e-20, 27.81% id in 338 aa" FT /db_xref="GOA:Q5LGH8" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:Q5LGH8" FT /protein_id="CAH06761.1" FT /translation="MITTIVKTLFQINVVANSGSTGHIAEELGRLVIASGWKSYIAYGR FT WACPSQSMLIRVGTRFDLFVHGLKSMFFDRHGFGSRRATLHLISKIEKIKPDIIHLHNL FT HGYYLNCEVLFDYLSTAKIPVVWTLHDCWSFTGHCVHFQNIGCEKWKTGCFACPNIRDY FT PKALGCDNSRMNFIEKKRLFTSVERMMIVPVCNWLSDMLSKSYLSQIKRQTIVNGIDLE FT MFTPKGNRDVIKSNLGVGTRYMILAVATVWGITKGFDDLIYLNSLLPDKSVIVVVGVTT FT KQIKKLPGNMIGIERTENTSQLVEIYSAADIFINPTYQDTLPTVNIEALACGTPVITYD FT TGGSADIVDSDTGMVLKRGDIHTLLEKILEIRERGKESYIIKCRQRALQFFDKSKQLSY FT YLSLYDQLLNKER" FT misc_feature 1273950..1273979 FT /note="PS00339 Aminoacyl-transfer RNA synthetases class-II FT signature 2." FT misc_feature 1274088..1274573 FT /note="Pfam match to entry PF00534 Glycos_transf_1, FT Glycosyl transferases group 1, score 63.1, E-value 5.2e-16" FT CDS 1274659..1275423 FT /transl_table=11 FT /gene="wcfJ" FT /locus_tag="BF9343_0981" FT /old_locus_tag="BF1024" FT /product="putative glycosyltransferase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative glycosyl transferase wcfJ SWALL:Q9XDJ3 FT (EMBL:AF048749) (254 aa) fasta scores: E(): 2.6e-99, 100% FT id in 254 aa, and to Helicobacter pylori J99 putative FT jhp0094 SWALL:Q9ZMX1 (EMBL:AE001448) (260 aa) fasta scores: FT E(): 1.4e-42, 47.6% id in 250 aa, and to Helicobacter FT pylori hypothetical protein Hp0102 hp0102 SWALL:O24928 FT (EMBL:AE000532) (259 aa) fasta scores: E(): 7e-42, 46.98% FT id in 249 aa" FT /db_xref="GOA:Q5LGH7" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:Q5LGH7" FT /protein_id="CAH06762.1" FT /translation="MKISLVTVTFNSAKTLCDTIHSVLSQSYTNIEYIIVDGLSNDETV FT TLIKEYEPLFQGRLKWISEKDKGLYDAMNKGIRMSTGDIVGIINSDDFYHRGDVLEKVA FT ESFEAGETEAIYGDVRFVNPDNLDRTVRYYSSKRFVPSLFRFGFMPAHPTFFTYRKYFD FT QFGYYKTNYKIAADYELLVRFLYVHRLKSKYLPLDFMKMRTGGASTASIKSNILLNKEI FT VRACKENGIWTCYPLLLLKYLVKVFELIFIKK" FT misc_feature 1274668..1275144 FT /note="Pfam match to entry PF00535 Glycos_transf_2, FT Glycosyl transferase, score 114.4, E-value 1.9e-31" FT CDS 1275420..1276439 FT /transl_table=11 FT /gene="wcfK" FT /locus_tag="BF9343_0982" FT /old_locus_tag="BF1025" FT /product="putative epimerase/dehydratase" FT /note="Similar to previously sequenced Bacteroides fragilis FT putative epimerase/dehydratase WcfK SWALL:Q9XDJ2 FT (EMBL:AF048749) (339 aa) fasta scores: E(): 5.1e-135, 100% FT id in 339 aa, and to previously sequenced Bacteroides FT fragilis putative dehydratase WcgW SWALL:Q9F749 FT (EMBL:AF285774) (335 aa) fasta scores: E(): 1.7e-112, FT 84.07% id in 339 aa, and to Pseudomonas aeruginosa protein FT similar to NAD dependent epimerase/dehydratase family FT SWALL:Q8KHX6 (EMBL:AF498401) (317 aa) fasta scores: E(): FT 7.1e-10, 28.57% id in 343 aa" FT /db_xref="GOA:Q5LGH6" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:Q5LGH6" FT /protein_id="CAH06763.1" FT /translation="MNILISGIHGFVGSNFIRALKDKHTLYGLDIVSPAKEGVVTTFSW FT QDFEPTSFPFQTLPQFDAIIHLAGKAHDTKKQSAAQSYFDINTGLTQKIFDFFLESSAK FT KFIFFSSVKAAADSVVGDVLTEDVIPTPVGPYGESKIKAEEYIKNHFMFPTSSISEDRS FT LRLEKEKGRIPKNKQVYILRPCMIHGPGNKGNLNLLYNVVKKGIPWPLGDFDNRRSFTS FT IDNLCYVIEGLLNQDVPTGIYHMGDDEALSTNELIGIMCEAMGKKPHIWKMNKRVMEGC FT AGLGTLMHLPLNTERLRKLTENYVVSNAKIKAALGIDKLPVTAKEGLMKTIRSFEETK" FT CDS 1276443..1277399 FT /transl_table=11 FT /gene="wcfL" FT /locus_tag="BF9343_0983" FT /old_locus_tag="BF1026" FT /product="putative phosphate transferase" FT /note="Similar to Bacteroides fragilis putative FT UDP-GlcNac:undecaprenylphosphate GlcNac-1-phosphate FT transferase WcfL SWALL:Q9XDJ1 (EMBL:AF048749) (318 aa) FT fasta scores: E(): 3.8e-130, 100% id in 318 aa, and to FT Bacteroides fragilis putative undpp-quinac-p-transferase FT wcgX SWALL:Q9F748 (EMBL:AF285774) (316 aa) fasta scores: FT E(): 4.7e-111, 85.62% id in 313 aa, and to Bacteroides FT thetaiotaomicron putative udp-glcnac:undecaprenylphosphate FT glcnac-1-phosphate transferase BT0396 SWALL:AAO75503 FT (EMBL:AE016927) (329 aa) fasta scores: E(): 7.5e-68, 55.34% FT id in 318 aa" FT /db_xref="GOA:Q5LGH5" FT /db_xref="InterPro:IPR000715" FT /db_xref="UniProtKB/TrEMBL:Q5LGH5" FT /protein_id="CAH06764.1" FT /translation="MYYLIILVLLFLAELFYFRIADKCNIIDKPNERSSHTRITLRGGG FT IIFYFGALAYFLTNHFEYPWFMLALSLITFISFIDDIRSTSQGLRLVFHFTAMALMFYQ FT WGLFSLPWWTILVALIICTGIINAYNFMDGINGITGGYSLIILIALAYINRIYVPFVEP FT DLIYTMLCAVLVFNFFNFRKQARCFAGDVGSVSIAFVILFLIGSLIIKTENFGWLILLA FT VYGVDSVLTIVHRLMLHENIGLPHRKHLYQIMANELRIPHVVVSLVYMIAQIIIIIGYL FT YCRNYGYWYLLGCILLLSGIYIVFMHKYFHLHLLSKR" FT misc_feature order(1276452..1276505,1276563..1276616,1276626..1276679, FT 1276713..1276766,1276776..1276835,1276854..1276922, FT 1276932..1276985,1277004..1277072,1277085..1277153, FT 1277220..1277288,1277298..1277357) FT /note="11 probable transmembrane helices predicted for FT BF1026 by TMHMM2.0 at aa 4-21, 41-58, 62-79, 91-108, FT 112-131, 138-160, 164-181, 188-210, 215-237, 260-282 and FT 286-305" FT misc_feature 1276629..1277063 FT /note="Pfam match to entry PF00953 Glycos_transf_4, FT Glycosyl transferase, score 8.6, E-value 2.2e-08" FT CDS complement(1277500..1279014) FT /transl_table=11 FT /locus_tag="BF9343_0984" FT /old_locus_tag="BF1027" FT /product="putative iron-regulated transmembrane protein" FT /note="Identical to previously sequenced Bacteroides FT fragilis hypothetical 57.6 kDa protein SWALL:Q9XDJ0 FT (EMBL:AF048749) (504 aa) fasta scores: E(): 1.1e-211, 100% FT id in 504 aa, and to Bacteroides fragilis hypothetical 57.5 FT kDa protein SWALL:Q9RGI3 (EMBL:AF125164) (504 aa) fasta FT scores: E(): 2.4e-210, 99.4% id in 504 aa, and to FT Caulobacter crescentus hypothetical protein Cc1782 CC1782 FT SWALL:Q9A7E1 (EMBL:AE005852) (381 aa) fasta scores: E(): FT 0.084, 28.86% id in 194 aa" FT /db_xref="GOA:Q5LGH4" FT /db_xref="InterPro:IPR005625" FT /db_xref="UniProtKB/TrEMBL:Q5LGH4" FT /protein_id="CAH06765.1" FT /translation="MKNFWKKYHKWVGLFFSFFILMFCFSGIVLNHRTLFSKAEVSRNW FT MPESYHYKNWNNGIIKGTLRLPDGKILAYGNAGVWKTDSCFATFADFNRGLAEGIDNRK FT ISNIVRVANNDIWCAGLYSIYLLNHDSWKEYPIAGNDERISDITQRGDTLVILTRSYLY FT TSVSPYDEFRKTELKTPENYSPKTSLFRTIWLLHSGELFGTPGKLAVDFLGVVLIVLSA FT TGIIYTLLPPFIRRRHRKRLPVKTQAKALKTSLNWHNKLGTWLIGLTLLLSVTGMCLRP FT PLMIPFVLVNTRPVPGSTLDSDNPWHDKLRSIRWDASRNVWLLSSSMGFYRINDLQLPP FT VKLKQTPPVSPMGVNVFHPQSPDEWLIGSFSGLFVWNPSTGTVLDYYTGQPPAAVHGRP FT LGGSLVNGFTDDLVTREVIFEYDNGARNKENNLVLPAMPDLIKQQPMSLWNFCLELHVG FT RCYSPFLGVFSDLFVFISGLLLTLILISGYIVYKRHHKRSKKIRMH" FT misc_feature complement(1277527..1279011) FT /note="Pfam match to entry PF03929 DUF337, Uncharacterized FT iron-regulated membrane protein (DUF337), score 389.7, FT E-value 2.4e-114" FT misc_feature complement(order(1277545..1277604,1278184..1278252, FT 1278313..1278381,1278928..1278981)) FT /note="4 probable transmembrane helices predicted for FT BF1027 by TMHMM2.0 at aa 12-29, 212-234, 255-277 and FT 471-490" FT misc_feature complement(1278922..1279014) FT /note="Signal peptide predicted for BF1027 by SignalP 2.0 FT HMM (Signal peptide probability 0.998) with cleavage site FT probability 0.891 between residues 31 and 32" FT CDS complement(1279028..1279672) FT /transl_table=11 FT /locus_tag="BF9343_0985" FT /old_locus_tag="BF1028" FT /product="conserved hypothetical lipoprotein" FT /note="Identical to previously sequenced Bacteroides FT fragilis hypothetical 23.1 kDa protein SWALL:Q9XDI9 FT (EMBL:AF048749) (214 aa) fasta scores: E(): 6.2e-83, 100% FT id in 214 aa, and to previously sequenced Bacteroides FT fragilis hypothetical 17.4 kDa protein SWALL:Q9RGI2 FT (EMBL:AF125164) (162 aa) fasta scores: E(): 1.5e-61, 100% FT id in 162 aa, and to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT0497 SWALL:AAO75604 (EMBL:AE016928) FT (220 aa) fasta scores: E(): 1.4e-07, 27.18% id in 217 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGH3" FT /protein_id="CAH06766.1" FT /translation="MNNKNKFRFAILLFGVLSAFIITACSDNNSPDDPSQGENTLPVKQ FT VSLSRKTAYGNDWIYYSLEKGKEVSVSEESHAENTDWDIAFNRYNVRTNSGASGKGKGG FT ALLTNIKDLAACTTVPQGTFTVDAAYTITAPGTGFPPPTMESTANEVLCKAITFAGPPP FT TYTPSDYVFIVRTASGKYAKLKAKSFYDDEGKSGIYSFEYAIQPDGSTNLN" FT misc_feature complement(1279598..1279630) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT misc_feature complement(1279601..1279672) FT /note="Signal peptide predicted for BF1028 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.596 between residues 24 and 25" FT CDS complement(1279689..1281752) FT /transl_table=11 FT /locus_tag="BF9343_0986" FT /old_locus_tag="BF1029" FT /product="putative TonB-dependent outer membrane receptor FT protein" FT /note="Similar to Porphyromonas gingivalis hemin-regulated FT protein HemR SWALL:P72198 (EMBL:U54787) (424 aa) fasta FT scores: E(): 1.8e-13, 38.98% id in 177 aa, and identical to FT Bacteroides fragilis putative TonB-dependent outer membrane FT receptor protein SWALL:Q9XDI8 (EMBL:AF048749) (687 aa) FT fasta scores: E(): 0, 100% id in 687 aa, and similar to FT Porphyromonas gingivalis hypothetical TonB-linked outer FT membrane receptor PG13 SWALL:Q9KIB0 (EMBL:AF237558) (757 FT aa) fasta scores: E(): 4.9e-43, 31.42% id in 697 aa" FT /db_xref="GOA:Q5LGH2" FT /db_xref="InterPro:IPR000531" FT /db_xref="InterPro:IPR012910" FT /db_xref="UniProtKB/TrEMBL:Q5LGH2" FT /protein_id="CAH06767.1" FT /translation="MMKVKLALLLTLIGTLPLAAQNVRQEQDTVSYMNDDPFNLEQIVV FT TATRTEKKIKNTPVITQIITSKQIEERGTGNIQDLLTQEVPGLNFQEVGYGTSIDIQGL FT GSKHILFLIDGERIAGENGGNIDYSRINLYNIDHIEIVKGASSALYGSQAMGGVINIIT FT RKAKKKFEASAGIRYAGRNQQNYKDTPKDHSQYKYRIHLDKPNLNTNLSLGLNLGKFTM FT NTDVLYKSFDGYQLFDKKPLVKYFPAYNTTITEELSKTPTSISGYEDVQVAHKMDYRFS FT KRLKVQLKGSYYMLNKYDFQADNIFEKSEDYTYGGSIDYTISDKSSLVASVHTDHYNRY FT DKYELKSGRRLEYKNNIIQPRIVYSTTALDKQTITGGLEYYRESLFSDKFETGVKENKS FT QWYATAFLQDDWSINKQFSVIAGLRCDYHEKYGTNLTPKASVMYKIFPFTVRFNYARGY FT RSPSIKELYMNWDHLGMFWIYGNSKLKPETNNYISLSGEYVNSWININANVYSNWFRNK FT IEGMWSNDQTELHYINIGKSRLAGVETMCKIQINRHINVHGAYNYLYTSKDADGVRLSS FT SSPHSGNIRAEYNTRIPRYATVVNLSGNIMGKKKFDVLDELEIDGKKVEAYYQAKVNPY FT CLWDLTVSQYIMQNLRITAGITNLFDYTSDRVTFNTSTSPGRNYFIACNYTL" FT misc_feature complement(1279692..1281590) FT /note="Pfam match to entry PF00593 TonB_dep_Rec, TonB FT dependent receptor, score 285.5, E-value 5.8e-83" FT misc_feature complement(1281693..1281752) FT /note="Signal peptide predicted for BF1029 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.867 between residues 20 and 21" FT CDS 1282000..1282536 FT /transl_table=11 FT /locus_tag="BF9343_0987" FT /old_locus_tag="BF1031" FT /product="putative hypoxanthine guanine FT phosphoribosyltransferase" FT /note="Similar to Salmonella typhimurium hypoxanthine FT phosphoribosyltransferase Hpt or STM0170 SWALL:HPRT_SALTY FT (SWALL:O33799) (178 aa) fasta scores: E(): 9.1e-19, 38.69% FT id in 168 aa, and identical to Bacteroides fragilis FT putative hypoxanthine guanine phosphoribosyltransferase FT HgpT SWALL:Q9XDI7 (EMBL:AF048749) (178 aa) fasta scores: FT E(): 9.3e-63, 100% id in 178 aa, and similar to Bacteroides FT thetaiotaomicron hypoxanthine-guanine FT phosphoribosyltransferase BT4386 SWALL:AAO79491 FT (EMBL:AE016945) (178 aa) fasta scores: E(): 2.6e-58, 92.13% FT id in 178 aa" FT /db_xref="GOA:Q5LGH1" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR005904" FT /db_xref="UniProtKB/TrEMBL:Q5LGH1" FT /protein_id="CAH06768.1" FT /translation="MDTIQIKDKLFTVSIREQEIQKEVIRVANEINRDLAGKNPLFLSV FT LNGSFMFTADLLKHITIPCEISFVKLASYQGVSSTGSIKEVIGINEDIAGRTIVIVEDI FT VDTGLTMQRLLETLGTRGPKEIHIASLLVKPDKLKVDLNIEYVAMNIPNDFIVGYGLDY FT DGFGRNYPDIYTVVD" FT misc_feature 1282018..1282473 FT /note="Pfam match to entry PF00156 Pribosyltran, FT Phosphoribosyl transferase domain, score 46.6, E-value FT 4.9e-11" FT misc_feature 1282291..1282329 FT /note="PS00103 Purine/pyrimidine phosphoribosyl FT transferases signature." FT CDS 1282592..1283161 FT /transl_table=11 FT /locus_tag="BF9343_0988" FT /old_locus_tag="BF1032" FT /product="putative adenylate kinase" FT /note="Similar to Gallus gallus adenylate kinase isoenzyme FT 1 Ak1 SWALL:KAD1_CHICK (SWALL:P05081) (194 aa) fasta FT scores: E(): 7.3e-25, 42.78% id in 187 aa, and to FT Bacteroides thetaiotaomicron adenylate kinase BT4387 FT SWALL:AAO79492 (EMBL:AE016945) (189 aa) fasta scores: E(): FT 1.7e-57, 88.88% id in 189 aa, and to Caulobacter crescentus FT adenylate kinase Adk or CC1269 SWALL:KAD_CAUCR FT (SWALL:Q9A8T2) (191 aa) fasta scores: E(): 1.4e-27, 46.23% FT id in 186 aa" FT /db_xref="GOA:Q5LGH0" FT /db_xref="HSSP:1P3J" FT /db_xref="InterPro:IPR000850" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGH0" FT /protein_id="CAH06769.1" FT /translation="MLNIVIFGAPGSGKGTQSERIVEKYGINHISTGDVLRAEIKNGTE FT LGKTAKGYIDQGQLIPDELMVDILASVFDSFKDSKGVIFDGFPRTIPQAEALKVMLKER FT GQDISVMLDLDVPEEELMTRLIKRGKESGRADDNEETIKKRLVVYNTQTSPLKEYYKGE FT GKYQHINGLGTMEGIFEDICKAVDTL" FT misc_feature 1282607..1283086 FT /note="Pfam match to entry PF00406 ADK, Adenylate kinase, FT score 266.7, E-value 2.6e-77" FT misc_feature 1282835..1282870 FT /note="PS00113 Adenylate kinase signature." FT CDS 1283245..1284417 FT /transl_table=11 FT /gene="obg" FT /locus_tag="BF9343_0989" FT /old_locus_tag="BF1033" FT /product="putative Spo0B-related GTP-binding protein" FT /note="Similar to Bacillus subtilis Spo0b-associated FT GTP-binding protein Obg or BSU27920 SWALL:OBG_BACSU FT (SWALL:P20964) (428 aa) fasta scores: E(): 1.6e-47, 42.01% FT id in 388 aa, and to Bacteroides thetaiotaomicron FT GTP-binding protein BT4388 SWALL:AAO79493 (EMBL:AE016945) FT (388 aa) fasta scores: E(): 3e-128, 93.29% id in 388 aa, FT and to Chlorobium tepidum GTP-binding protein Obg or CT2213 FT SWALL:Q8KAF0 (EMBL:AE012967) (335 aa) fasta scores: E(): FT 1.6e-65, 60.49% id in 324 aa" FT /db_xref="GOA:Q5LGG9" FT /db_xref="HSSP:1LNZ" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR006074" FT /db_xref="InterPro:IPR006169" FT /db_xref="InterPro:IPR014100" FT /db_xref="UniProtKB/Swiss-Prot:Q5LGG9" FT /protein_id="CAH06770.1" FT /translation="MVMAESNFVDYVKIYCRSGKGGRGSTHMRREKYTPNGGPDGGDGG FT RGGHVILRGNRNYWTLLHLRYDRHAMAGHGESGSKNRSFGKDGADKIIEVPCGTVVYNA FT ETGEYVCDVTEHGQEVILLKGGRGGLGNWHFKTATRQAPRFAQPGEPMQEMTVILELKL FT LADVGLVGFPNAGKSTLLSAISAAKPKIADYPFTTLEPNLGIVSYRDGQSFVMADIPGI FT IEGASEGKGLGLRFLRHIERNSLLLFMIPADSDDIRKDYEVLLNELKTFNPEMLDKQRV FT LAITKSDMLDQELMDEIEPTLPEGIPHVFISSVSGLGISVLKDILWTELNKESNKIEAI FT VHRPKDVSRLQQELKDMGEDEELDYEYEDDGDGDEDDLDYEYEEEDWEDK" FT misc_feature 1283305..1284114 FT /note="Pfam match to entry PF01018 GTP1_OBG, GTP1/OBG FT family, score 328.5, E-value 6.6e-96" FT misc_feature 1283755..1283778 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 1283896..1283937 FT /note="PS00905 GTP1/OBG family signature." FT CDS 1284414..1285226 FT /transl_table=11 FT /locus_tag="BF9343_0990" FT /old_locus_tag="BF1034" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4389 SWALL:AAO79494 (EMBL:AE016945) FT (270 aa) fasta scores: E(): 4.2e-74, 67.65% id in 269 aa, FT and to Myxococcus xanthus hypothetical protein FT SWALL:AAO22912 (EMBL:AY204472) (253 aa) fasta scores: E(): FT 4.3e-21, 35.82% id in 254 aa, and to Brucella melitensis FT hypothetical cytosolic protein Bmei0486 SWALL:Q8YIF8 FT (EMBL:AE009491) (265 aa) fasta scores: E(): 1.5e-20, 33.99% FT id in 253 aa" FT /db_xref="InterPro:IPR003730" FT /db_xref="InterPro:IPR011324" FT /db_xref="UniProtKB/TrEMBL:Q5LGG8" FT /protein_id="CAH06771.1" FT /translation="MISLTDDRKMLGYGLLGAYPNISHFVTTRHGGYSEGAYASFNCSP FT FSGDELERVEKNQTLLFQSLSQAPRHLIIPFQTHGTKILPVDEKFLGASGQQQQEMLNE FT IDALITTEPGCCICISTADCIPVLLYDRVHHAVAAVHAGWRGTVEYIVGHTLEKMRAVF FT GTEGQDVIACIGPGISLQSFEVGDEVYEAFRLNGFDMSRISFRHSVTHKYHIDLWEANR FT QQLLDFGVPGVQIEIADICTYIRHEDFFSARRLGIKSGRILSGIMINS" FT misc_feature 1284519..1285217 FT /note="Pfam match to entry PF02578 DUF152, Uncharacterised FT ACR, YfiH family COG1496, score 177.6, E-value 1.8e-50" FT CDS 1285248..1285913 FT /transl_table=11 FT /locus_tag="BF9343_0991" FT /old_locus_tag="BF1035" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4390 SWALL:AAO79495 (EMBL:AE016945) FT (221 aa) fasta scores: E(): 1.5e-67, 81.9% id in 221 aa, FT and to Sulfolobus solfataricus hypothetical protein SSO0658 FT or C09_009 SWALL:Q9UX48 (EMBL:Y18930) (224 aa) fasta FT scores: E(): 5.2e-12, 33.33% id in 213 aa, and to Bacillus FT halodurans hypothetical protein BH1019 SWALL:Q9KE39 FT (EMBL:AP001510) (224 aa) fasta scores: E(): 2.5e-11, 30.27% FT id in 218 aa" FT /db_xref="GOA:Q5LGG7" FT /db_xref="InterPro:IPR005146" FT /db_xref="InterPro:IPR020825" FT /db_xref="UniProtKB/TrEMBL:Q5LGG7" FT /protein_id="CAH06772.1" FT /translation="MYTIIVSKELKEACPVFAGVAIYAEVKNTSYCEGLWEEIQSFTEM FT LTATTRLEDIKKQPVIAATREAYKRCGKDPGRYRPSAEALRRRLMRGIALYQIDTLVDL FT INLVSLRTGHSIGGFDADKIAGTGLELGIGKINEPFEGIGRGVLNIEGLPVYRDAVGGI FT GTPTSDNERTKMGLETTHILAIVNGYNGKEGLQEAAEMIQTLLKKYADSDGGTITYFE" FT CDS 1285925..1286656 FT /transl_table=11 FT /locus_tag="BF9343_0992" FT /old_locus_tag="BF1036" FT /product="putative M23/M37-family peptidase" FT /note="Similar to Bacteroides thetaiotaomicron putative FT metalloendopeptidase BT4391 SWALL:Q89ZI6 (EMBL:AE016945) FT (212 aa) fasta scores: E(): 5.7e-52, 70.14% id in 201 aa, FT and to Bacteroides thetaiotaomicron putative peptidase FT BT3926 SWALL:Q8A0U5 (EMBL:AE016942) (290 aa) fasta scores: FT E(): 1.1e-16, 43.87% id in 155 aa, and to Rhizobium FT meliloti hypothetical transmembrane protein SMC00539 r01744 FT or SMC00539 SWALL:Q92KB3 (EMBL:AL591788) (413 aa) fasta FT scores: E(): 5.1e-11, 39.55% id in 134 aa" FT /db_xref="InterPro:IPR011055" FT /db_xref="InterPro:IPR016047" FT /db_xref="UniProtKB/TrEMBL:Q5LGG6" FT /protein_id="CAH06773.1" FT /translation="MKNIFTLLILSVCFLCANISGRAQNKFSDMEVNHVRVATPGLFSK FT ENCVMLDLKSLSRNYSFPLPGGKVISGYGTRGGHSGDDIKTCARDTIRAAFDGVVRMAK FT PYGAYGNVIVIRHPNGLETVYSHNVKNLVKSGDVVKAGMAIGLTGRTGRATTEHLHFET FT RINGQHFNPGLIFDMKKGTLRTDYLQCTKKGKGIVVKALKSEKVLPKYKTLSPFLYELP FT GIKKPVWNIPALARSAAYSGL" FT misc_feature 1286201..1286449 FT /note="Pfam match to entry PF01551 Peptidase_M37, Peptidase FT family M23/M37, score 112.1, E-value 9e-31" FT CDS complement(1286595..1287779) FT /transl_table=11 FT /locus_tag="BF9343_0993" FT /old_locus_tag="BF1037" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT2758 SWALL:AAO77864 (EMBL:AE016937) (389 aa) FT fasta scores: E(): 5.3e-47, 34.91% id in 401 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGG5" FT /protein_id="CAH06774.1" FT /translation="MKRHVFLLVTLFTMSTVAAQQQPIISPKDSIPSVIERVTGKENKG FT FSAHMNLQLYTSCAASFTENELDEVAFKLNRFKLEIIGNINRKFSYHFRQSFNKYSNPF FT ALDNLSSSVEYAYLTYHLSDRFSITAGKQFLMLGGYEYYVNPIKVREFSEFNNYVNCFL FT AGVSATWNVTPTQELNFQIVNNRNGGDADTYLHGLPTDVEATKVPLISTINWNSYYLDK FT AIQLRYAASWGQQAKGRNIMYLTAGNVYEKGPWIAYMDFMYSRQGIDNKGIISALPRID FT LENPQTAQHTEYFTTIANVDYRFHPNWNAYLKGIYESGKIYKANGIFEKGTYRRTWCGQ FT VCVEYYPMRNSELLIFLHYQYKRNKLLKPARNLDAIDPNTQRISLGLVYSIPVF" FT misc_feature complement(1287723..1287779) FT /note="Signal peptide predicted for BF1037 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.782 between residues 19 and 20" FT CDS complement(1287898..1289052) FT /transl_table=11 FT /locus_tag="BF9343_0994" FT /old_locus_tag="BF1038" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4399 SWALL:AAO79504 (EMBL:AE016945) FT (383 aa) fasta scores: E(): 9.3e-108, 71.01% id in 383 aa, FT and to Bacteroides thetaiotaomicron conserved hypothetical FT protein BT1122 SWALL:AAO76229 (EMBL:AE016930) (384 aa) FT fasta scores: E(): 1.5e-55, 43.1% id in 348 aa, and to FT Pseudomonas putida conserved hypothetical protein PP2021 FT SWALL:AAN67635 (EMBL:AE016781) (376 aa) fasta scores: E(): FT 1e-38, 36.38% id in 360 aa" FT /db_xref="InterPro:IPR011048" FT /db_xref="InterPro:IPR015943" FT /db_xref="InterPro:IPR019405" FT /db_xref="PDB:3SCY" FT /db_xref="UniProtKB/TrEMBL:Q5LGG4" FT /protein_id="CAH06775.1" FT /translation="MVKKIISICAAGMIVASCSPKKTTAQPTDPSTTDSELTMLVGTYT FT SGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFA FT FDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVI FT EFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK FT GTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNA FT QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNG FT KYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFVD" FT misc_feature complement(1288978..1289052) FT /note="Signal peptide predicted for BF1038 by SignalP 2.0 FT HMM (Signal peptide probability 0.992) with cleavage site FT probability 0.831 between residues 25 and 26" FT misc_feature complement(1288999..1289031) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(1289423..1289770) FT /transl_table=11 FT /locus_tag="BF9343_0995" FT /old_locus_tag="BF1040" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGG3" FT /protein_id="CAH06776.1" FT /translation="MKLIQYISTTYVREELYNPDNWDLINPKSPPEFISSGGPFCHKVE FT LEGFEPSSKRGNHKLSTCLSLPKFFVQEQNQSHQFLPYPLKFHQKRKATSDYPRCNCTT FT EPECFGATASE" FT CDS join(1290288..1292969,1292969..1294024) FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_0996" FT /old_locus_tag="BF1041" FT /product="putative two-component system, sensor histidine FT kinase/response regulator fusion (pseudogene)" FT /note="Pseudogene. Similar to Bacteroides thetaiotaomicron FT two-component system sensor histidine kinase/response FT regulator, hybrid BT3738 SWALL:Q8A1C8 (EMBL:AE016942) (1330 FT aa) fasta scores: E(): 9.1e-62, 29.29% id in 1345 aa, and FT to Bacteroides thetaiotaomicron two-component system sensor FT histidine kinase/response regulator, hybrid BT1734 FT SWALL:Q8A6Z1 (EMBL:AE016933) (1346 aa) fasta scores: E(): FT 1.2e-58, 29.97% id in 1328 aa, and to Bacteroides FT thetaiotaomicron two-component system sensor histidine FT kinase/response regulator, hybrid BT0958 SWALL:Q8A959 FT (EMBL:AE016929) (1329 aa) fasta scores: E(): 5.5e-43, FT 28.92% id in 1331 aa. Note: This CDS contains a frameshift FT after residue 894" FT misc_feature 1292391..1292459 FT /note="1 probable transmembrane helix predicted for BF1041 FT by TMHMM2.0 at aa 702-724" FT misc_feature 1293269..1293622 FT /note="Pfam match to entry PF00072 response_reg, Response FT regulator receiver domain, score 17.0, E-value 7.2e-06" FT misc_feature 1293728..1293868 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 33.0, E-value 5.9e-07" FT misc_feature 1293767..1293832 FT /note="Predicted helix-turn-helix motif with score FT 1363.000, SD 3.83 at aa 226-247, sequence FT FKIGELSGCMNMSRSSFYNKIK" FT misc_feature 1293875..1294003 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature 1293887..1294018 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 40.5, E-value 3.1e-09" FT misc_feature 1294185..1295189 FT /note="Pfam match to entry PF00817 IMS, impB/mucB/samB FT family, score 358.1, E-value 8.1e-105" FT CDS 1294191..1295255 FT /transl_table=11 FT /gene="dinB" FT /gene_synonym="dinP" FT /locus_tag="BF9343_0997" FT /old_locus_tag="BF1043" FT /product="putative DNA polymerase IV" FT /EC_number="2.7.7.7" FT /note="Similar to Escherichia coli DNA polymerase IV DinB FT or DinP or B0231 SWALL:DPO4_ECOLI (SWALL:Q47155) (351 aa) FT fasta scores: E(): 1.9e-43, 40.7% id in 339 aa, and to FT Bacteroides thetaiotaomicron DNA damage-inducible protein FT BT4409 SWALL:Q89ZG8 (EMBL:AE016945) (353 aa) fasta scores: FT E(): 8.8e-124, 87.78% id in 352 aa, and to Rhizobium FT meliloti DNA polymerase IV 2 DinB2 or RA1274 or SMA2355 FT SWALL:DP42_RHIME (SWALL:Q92XH8) (354 aa) fasta scores: E(): FT 2.4e-63, 53.93% id in 330 aa" FT /db_xref="GOA:Q5LGG2" FT /db_xref="InterPro:IPR001126" FT /db_xref="InterPro:IPR017961" FT /db_xref="InterPro:IPR017962" FT /db_xref="InterPro:IPR017963" FT /db_xref="InterPro:IPR022880" FT /db_xref="InterPro:IPR024728" FT /db_xref="UniProtKB/TrEMBL:Q5LGG2" FT /protein_id="CAH06778.1" FT /translation="MDAFYASVEQRDHPELRGKPLAVGHAEERGVVAAASYEARRYGVR FT SAMSSQKAKRLCPQLIFVPGRMEVYKSVSRQVHEIFHEYTDLIEPLSLDEAFLDVTENK FT QGILLAVDIAKAIKQRIREELSLVASAGVSYNKFLAKIASDFRKPDGLCTIHPDQAIDF FT IARLPIESFWGVGPVTARKMHLLGIHNGLQLRECSSEMLVRQFGKVGLLYYDFARGVDL FT RPVEAVRIRKSIGCEHTLEKDIHVRSSVIIELYHVATELVERLQQKEFRGNTLTLKIKF FT HDFSQITRSMTQAQELTNLERILPLAKQLLKEVEYEQHPIRLIGLSVSNPREEADEHRG FT VWEQLSFEFSDWGK" FT CDS 1295367..1295795 FT /transl_table=11 FT /locus_tag="BF9343_0998" FT /old_locus_tag="BF1044" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGG1" FT /protein_id="CAH06779.1" FT /translation="MSLHKYSIVLLALLALLCSCHDEDKGDIPQSDERTADFIVKYKDD FT FGIHTDYKAKVYIYYGIYSMDIVGFHYLPDGVLDHEGKEITPDIRLSADGKEDITLLLD FT NAEKVTVIVESSYYEGRVGITSYSPGDTPIKGIFTFGE" FT misc_feature 1295394..1295426 FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(1295918..1298596) FT /transl_table=11 FT /locus_tag="BF9343_0999" FT /old_locus_tag="BF1045" FT /product="possible transglutaminase-family protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4412 SWALL:Q89ZG5 (EMBL:AE016945) FT (905 aa) fasta scores: E(): 8.6e-146, 72.92% id in 916 aa, FT and to Pirellula sp similar to polyhydroxyalkanoate FT depolymerase rb10165 SWALL:CAD78738 (EMBL:BX294151) (1048 FT aa) fasta scores: E(): 1e-18, 28.86% id in 433 aa" FT /db_xref="InterPro:IPR002931" FT /db_xref="InterPro:IPR003344" FT /db_xref="PDB:3E8V" FT /db_xref="UniProtKB/TrEMBL:Q5LGG0" FT /protein_id="CAH06780.1" FT /translation="MKTLTRFLIIPMLSVAFFSCSESHFLKDVAYRNQVTQDFEMKKQQ FT LPNGELFAVFNEKLTIPEQEALMFLYAYMPTGDVTDYTGDYYLENVRLSDQARREMPWG FT KEIPDDVFRHFVLPIRVNNENLDDSRRVFYNELKDRVKNLSLHDAVLEVNHWCHEKVIY FT TPSDARTSAPLASVKTAYGRCGEESTFTVAALRSVGIPARQVYTPRWAHTDDNHAWVEA FT WVDGKWYFFGACEPEPVLNLGWFNAPASRGMLMHTKVFGRYTGQEEIMYETPNYTEINV FT IDNYAPTAKGSVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGD FT MLVWASKDGRFGYSKLSFGKDNELKITLDKNASETYSLPLDIVPPAEGANLPEVTPEQR FT TENDRRMAQEDSIRNAYVATFITEEQARTFAKENKLDETETVRLLIASRGNHQTLTDFL FT SDAVKADKAGQAISLLKVVSAKDLRDVSPEVLNDHLNNSGLPASEDFCSNVLNPRVANE FT MITPYKAFFRKEIPASEAEAFRKNPQALVEWCKKEITINNELNSQRIPMSPMGVWKARV FT ADEKSRNIFFVSMARSLGIPAWIDEVTGKIQYRTFNDNNLKNGKVYDVDFEAAQQTQAP FT TGTLVARYRPIPSLSDPKYYSHFTLSKFRNGTFQLLNYDEGDVDMGGGATWSNLLKNGA FT RLDTGYYMMVTGTRMASGAVLANVTFFTIEEGKTTTVDLVMRESKDQVQVIGNFNSEST FT YLPIGTSEPQSILQTCGRGYYVVAVLGAGQEPTNHALRDIAALSGEFEKWGRKMVLLFP FT SEEQYKKFRPSEFPGLPSTITYGIDVDGAIQKQIAESMKLPNSTILPMFIIGDTFNRVV FT FVSQGYTIGLGEQLMKVIHGL" FT misc_feature complement(1297895..1298062) FT /note="Pfam match to entry PF01841 Transglut_core, FT Transglutaminase-like superfamily, score 36.8, E-value FT 4.3e-08" FT misc_feature complement(1298537..1298569) FT /note="PS00013 Prokaryotic membrane lipoprotein lipid FT attachment site." FT CDS complement(1298836..1300431) FT /transl_table=11 FT /locus_tag="BF9343_1000" FT /old_locus_tag="BF1046" FT /product="putative C4-dicarboxylate anaerobic carrier" FT /note="Similar to Streptococcus gordonii arginine-ornithine FT antiporter ArcD SWALL:Q8GND2 (EMBL:AF534569) (504 aa) fasta FT scores: E(): 3.2e-18, 30.35% id in 537 aa, and to FT Escherichia coli O6 hypothetical protein c5347 SWALL:Q8FAE2 FT (EMBL:AE016771) (482 aa) fasta scores: E(): 3.3e-25, 30.49% FT id in 528 aa, and to Salmonella typhi putative membrane FT protein STY4802 or t4498 SWALL:Q8Z128 (EMBL:AL627283) (467 FT aa) fasta scores: E(): 4.2e-25, 31.19% id in 529 aa" FT /db_xref="GOA:Q5LGF9" FT /db_xref="InterPro:IPR018385" FT /db_xref="UniProtKB/TrEMBL:Q5LGF9" FT /protein_id="CAH06781.1" FT /translation="MLKRIPHTYTIISSVILLCAVLSWIIPAGEYMRETIDVNGISRTV FT IVDHSFHRVEQTPQTWQVFSSLLEGFERQAGIIAFLLIMGGAFQIMNSSRAIDTGIFSF FT LNFTKGLEKHRLIKILGVNNVVISLVIILFSLFGSVFGMSEETLAFVIIIVPLAISMGY FT DSITGLCMVYVAAHIGFSGAVLNPFTIGIAQGLSDLPLFSGFEYRMFCWLILTTALIVC FT VLRYAAVVKKHPEKSPMYHADAYWRKREKESCGEISHVTTRQAWIVYLLLLVSLGLFSI FT IYPISTFSVGEASVTCYAVPTLSILFAVFGWLGLRKSNQFFILTLLAFTILFLIIGVMG FT HGWYLPEISAIFLAMGILSGFANSEHADAIIKQFMDGAKDMLSAAIVVGLAGGIIQILQ FT DGHIIDPILHSLASLMGEAGKIVSLGVMYLIQTLINLIIPSGSAKAALTMPIMAPFSDV FT IGLSRQATVMAYQFGDGFTNMITPTSAVLMGALGIARIPYEIWVKWFWKILLLFIILGM FT VLLIPTVLFPLNGF" FT misc_feature complement(order(1298854..1298922,1299103..1299171, FT 1299235..1299288,1299346..1299405,1299415..1299468, FT 1299487..1299555,1299568..1299636,1299745..1299813, FT 1299856..1299924,1299943..1299996,1300009..1300077, FT 1300141..1300209,1300351..1300419)) FT /note="13 probable transmembrane helices predicted for FT BF1046 by TMHMM2.0 at aa 5-27, 75-97, 119-141, 146-163, FT 170-192, 207-229, 266-288, 293-315, 322-339, 343-362, FT 382-399, 421-443 and 504-526" FT misc_feature complement(1298854..1300422) FT /note="Pfam match to entry PF03606 DcuC, C4-dicarboxylate FT anaerobic carrier, score 297.3, E-value 1.6e-86" FT misc_feature complement(1300348..1300431) FT /note="Signal peptide predicted for BF1046 by SignalP 2.0 FT HMM (Signal peptide probability 0.801) with cleavage site FT probability 0.399 between residues 28 and 29" FT CDS 1300651..1300785 FT /transl_table=11 FT /locus_tag="BF9343_1001" FT /old_locus_tag="BF1047" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGF8" FT /protein_id="CAH06782.1" FT /translation="MKKNANEIMMLQYRIKRYQAMGNGTMCQLLNGKLQKLLAKQVTM" FT CDS 1300950..1301333 FT /transl_table=11 FT /locus_tag="BF9343_1002" FT /old_locus_tag="BF1048" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4413 SWALL:Q89ZG4 (EMBL:AE016945) (145 aa) fasta FT scores: E(): 0.00013, 34.48% id in 145 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT4640 FT SWALL:Q89YU1 (EMBL:AE016946) (146 aa) fasta scores: E(): FT 4.7, 32.65% id in 147 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGF7" FT /protein_id="CAH06783.1" FT /translation="MIKYIFCILIGIFFVYGAGYTASIEETAELPAEVTATFVSQYAGD FT HSLFNDETAESKVCDAILPHSSFSRELSSSKILKLKLQTAIRLLNASLFHQSERGDTYL FT DFNHNFIKYSSGYYVYSLGHILI" FT CDS 1301396..1301914 FT /transl_table=11 FT /locus_tag="BF9343_1003" FT /old_locus_tag="BF1049" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT4414 SWALL:Q89ZG3 (EMBL:AE016945) (183 aa) fasta FT scores: E(): 1.2e-28, 53.8% id in 171 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGF6" FT /protein_id="CAH06784.1" FT /translation="MPGGCVLYFPAVGIHCILFFNLKSYCVMFSLLLSTFAMMGLTFVI FT GFFVAGVIKLIASAADSLAFYSSHQEELARLKRIRKLHQKVATLITESALSDEEYGSDG FT REDFSRGVTKHPGDNRGFYHGVSPGESERGLMDYFYPEDTRTMFLRKEEQMLQHDKKNN FT KTSSTNKKQ" FT misc_feature 1301489..1301572 FT /note="Signal peptide predicted for BF1049 by SignalP 2.0 FT HMM (Signal peptide probability 0.931) with cleavage site FT probability 0.621 between residues 28 and 29" FT misc_feature 1301498..1301566 FT /note="1 probable transmembrane helix predicted for BF1049 FT by TMHMM2.0 at aa 4-26" FT CDS 1301926..1303140 FT /transl_table=11 FT /gene="mmdB" FT /locus_tag="BF9343_1004" FT /old_locus_tag="BF1050" FT /product="putative transmembrane FT methylmalonyl-CoA/oxaloacetate decarboxylase, beta-subunit" FT /EC_number="4.1.1.41" FT /note="Similar to Propionigenium modestum methylmalonyl-CoA FT decarboxylase, beta-subunit MmdB SWALL:O54031 FT (EMBL:AJ002015) (395 aa) fasta scores: E(): 1.3e-27, 31% id FT in 387 aa, and to Bacteroides thetaiotaomicron putative FT decarboxylase beta subunit BT4415 SWALL:AAO79520 FT (EMBL:AE016945) (404 aa) fasta scores: E(): 3.7e-144, FT 92.82% id in 404 aa, and to Malonomonas rubra putative FT carboxybiotin decarboxylase subunit of malonate FT decarboxylase MadB SWALL:O06923 (EMBL:U87980) (401 aa) FT fasta scores: E(): 3.2e-80, 53.04% id in 394 aa" FT /db_xref="GOA:Q5LGF5" FT /db_xref="InterPro:IPR005661" FT /db_xref="UniProtKB/TrEMBL:Q5LGF5" FT /protein_id="CAH06785.1" FT /translation="MESIDFGTLFQGFGTMIASGWFLASARMFLIALGFLLIYLGWKGV FT LEPMVMIPMGLGMVAINCGTLIMPDGTLGNLFLDPMLSDTDALMNTMQIDFLQPVYTLT FT FSNGLIACFVFMGIGTLLDVGFLLQKPFASIFLALCAELGTFLTVPIASGLGLSLKESA FT SVAMVGGADGPMVLFTSLALAKHLFVPITVVAYLYLGLTYGGYPYLVKLLIPKRLRAIK FT MVEKKAPKNYDAKVKLAFSAILCAVLCFLFPVASPLFFSLFLGVAVRESGMKHIYDFVS FT GPLLYGSTFMLGLLLGVLCDAHLLLDPKILKLLVLGMLALLLSGIGGIMGGYIMYFIKK FT GNYNPVIGIAAVSCVPTTAKVAQKLVSKDNPNSFILGDALGANISGVITSAIITGIYIT FT IIPYL" FT misc_feature order(1301983..1302051,1302070..1302129,1302223..1302291, FT 1302328..1302396,1302487..1302555,1302649..1302717, FT 1302775..1302843,1302862..1302930,1303060..1303128) FT /note="9 probable transmembrane helices predicted for FT BF1050 by TMHMM2.0 at aa 20-42, 49-68, 100-122, 135-157, FT 188-210, 242-264, 284-306, 313-335 and 379-401" FT misc_feature 1301989..1303131 FT /note="Pfam match to entry PF03977 OadB_MmdB, FT Na+-transporting methylmalonyl-CoA/oxaloacetate FT decarboxylase, beta subunit, score 70.4, E-value 4.9e-22" FT CDS complement(1303444..1304934) FT /transl_table=11 FT /locus_tag="BF9343_1005" FT /old_locus_tag="BF1051" FT /product="putative 3,4-dihydroxy-2-butanone FT 4-phosphate/shikimate 5-dehydrogenase fusion protein" FT /note="C-terminal region similar to Agrobacterium FT tumefaciens shikimate 5-dehydrogenase AroE or ATU4295 or FT AGR_L_1139 SWALL:Q8U804 (EMBL:AE009357) (291 aa) fasta FT scores: E(): 1.6e-54, 56.07% id in 280 aa, and N-terminal FT region to Escherichia coli, Escherichia coli O157:H7, and FT Shigella flexneri 3,4-dihydroxy-2-butanone 4-phosphate FT synthase RibB or HtrP or B3041 or Z4399 or ECS3929 or FT SF3081 or S3286 SWALL:RIBB_ECOLI (SWALL:P24199) (217 aa) FT fasta scores: E(): 1.4e-46, 62.8% id in 207 aa" FT /db_xref="GOA:Q5LGF4" FT /db_xref="InterPro:IPR000422" FT /db_xref="InterPro:IPR006151" FT /db_xref="InterPro:IPR011342" FT /db_xref="InterPro:IPR013708" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017945" FT /db_xref="InterPro:IPR022893" FT /db_xref="UniProtKB/TrEMBL:Q5LGF4" FT /protein_id="CAH06786.1" FT /translation="MKANNLLSQFGDHRQRVQSAITAVCEGRGILLVDDENRENEGDLI FT FSAQSMTEADMAIMIRHCSGIVCLCITEEKARQLNLPLMVEQNTSKYGTAFTISIEAAE FT GVTTGVSAADRIQTIRTAIAPNATPESLHHPGHIFPLIARSGGIKERSGHTEGSIDLMK FT LAGLAPCAVLCELTNDDGTMARLPEIIKFGLEHKYPVVTINDLKEYQTAPDFLPKLVGS FT FSCPAAENPTTAIMEAAFRHHYMHYRYINCEVGPENLAAAIQGAKAMGWRGFNCSLPNK FT VEIIRYLDELGESAKIIGAVNTVVIGDDQRATGENTDGKGFVKAISEIITIQDKKIALL FT GAGGAARAIAVEMALAGVKEITILNRNRDKGQALADLLNSQTVATARFVLWDHPYRFST FT DIDIVINATSVGLYSNVDQRLNIDTDTLLPHMVVADCIPNPVYTQLLRDAVRRGCCHVL FT PGMKMLVYQAVIAIKYWSGVDVDPDIMLEKLKEVVKPA" FT misc_feature complement(1303501..1304232) FT /note="Pfam match to entry PF01488 Shikimate_DH, Shikimate FT / quinate 5-dehydrogenase, score 216.0, E-value 4.9e-62" FT misc_feature complement(1304299..1304886) FT /note="Pfam match to entry PF00926 DHBP_synthase, FT 3,4-dihydroxy-2-butanone 4-phosphate synthase, score 370.5, FT E-value 1.5e-108" FT CDS 1305157..1306023 FT /transl_table=11 FT /locus_tag="BF9343_1006" FT /old_locus_tag="BF1052" FT /product="putative AraC-family transcriptional regulator" FT /note="Similar to Pseudomonas aeruginosa transcriptional FT regulator MtlR or pa2337 SWALL:Q9I1E1 (EMBL:AE004660) (301 FT aa) fasta scores: E(): 4e-20, 28.62% id in 283 aa, and to FT Bacteroides thetaiotaomicron transcriptional regulator FT BT3122 SWALL:AAO78228 (EMBL:AE016939) (289 aa) fasta FT scores: E(): 5e-24, 29.41% id in 272 aa, and to Pseudomonas FT fluorescens activator protein MtlR SWALL:O52770 FT (EMBL:AF047527) (301 aa) fasta scores: E(): 1.6e-18, 28.3% FT id in 272 aa" FT /db_xref="GOA:Q5LGF3" FT /db_xref="InterPro:IPR003313" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR011051" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR014710" FT /db_xref="InterPro:IPR018060" FT /db_xref="InterPro:IPR018062" FT /db_xref="UniProtKB/TrEMBL:Q5LGF3" FT /protein_id="CAH06787.1" FT /translation="MAILERKIIHEIDTSCSHIIYPQFVLPRHKHAEYEIMLFTQGSGK FT QFVGEGVADFQEGDIALIGSNVPHLHLCNSKLNPVANTVCSAGEALQFLPDIFPVHIEN FT LPDYQEIYRLLRKSQYGVRFYDKGLYDEVKELFQEMDLLKHTNRLITILRILGRLTECR FT NIKLLSDVAYNGSNRLLEVNEPVNKVYTYLFNHFKEKVLLQEVADYVKQNPSALCRYFK FT QRTDKSIFQCLAEIRIEHACKLLSYSNLSVSQIAFESGFNSVPYFIKQFQSITEKTPGE FT YRELIGR" FT misc_feature 1305721..1305858 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 8.2, E-value 0.45" FT misc_feature 1305757..1305822 FT /note="Predicted helix-turn-helix motif with score FT 1544.000, SD 4.45 at aa 201-222, sequence FT VLLQEVADYVKQNPSALCRYFK" FT misc_feature 1305865..1305993 FT /note="PS00041 Bacterial regulatory proteins, araC family FT signature." FT misc_feature 1305877..1306008 FT /note="Pfam match to entry PF00165 HTH_AraC, Bacterial FT regulatory helix-turn-helix proteins, araC family, score FT 45.3, E-value 1.2e-10" FT CDS 1306201..1306365 FT /transl_table=11 FT /locus_tag="BF9343_1007" FT /old_locus_tag="BF1053" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGF2" FT /protein_id="CAH06788.1" FT /translation="MRLFNRIQASIHDIYWENQCTDHLMTDELRREEGEPLPLSVADVM FT ETLVWKVLK" FT CDS complement(1306384..1309242) FT /transl_table=11 FT /locus_tag="BF9343_1008" FT /old_locus_tag="BF1054" FT /product="conserved hypothetical exported protein" FT /note="Similar to Vibrio vulnificus fog: wd40 repeat FT VV20373 SWALL:Q8D6Z7 (EMBL:AE016809) (944 aa) fasta scores: FT E(): 1.3e-12, 20.98% id in 710 aa" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:Q5LGF1" FT /protein_id="CAH06789.1" FT /translation="MLKSKYLFLSLICLLTSFRLHAQFMDYGSDPAKFKWNIARLPHYN FT LVYPQGNDSMAYRYALFLENVYPHMSKTIGKPIKAKFPVILHPGNMQSNGMVSWAPRRM FT ELITTPSSDLNNQSWDKHLVLHESRHVFQTGKVMHGIFKPLYYIIGEQAAGVASFFLPV FT WFLEGDAVSTETAMSNGGRGRLPEFNMVYRAQMLGGKKNYSFDKWLMGSYKNYTGTYYA FT LGFDMTSYARQRYGADIWDKSTSRYIRNLLFEGSFKHYTGSSFKRLQHDTFDFLRAEWE FT KQDTCTQSPQYLSPAKETYTSYRYPQPINDSIVIAVKSGLKDINSLVIINNGREKHLDY FT IGSINSRLSYRNGRVYWSELVPGLRWTHQNYSIIKYYDLDKKNIKTLTPRQRYLSPAID FT EQGQHIAVSRPTVEGKNQLVLIQAEKGNELAAFDVPDNAFIKELTFAGGDTIILIAVAD FT SGIRLLQFNFGNGIWKELLKTTSVNITSPIWKDGKIFFESGANGTNNIYSLNPADGQVR FT RMTAARFGAFDPSFGSSDGRLFFSDYQADGYRIASLPTDSMLFEKTDLNQSASMPFVET FT LAAQEQFNLDSARLTSVDFNPKRYRKAEHTFKIHSWAPFYYDVAEAMNSGASDLSTIVK FT PGATLMSQNTLNTAIMQAGWYIDKGYHHGKLSFIYQGWFPVINLSVDYGDKAFNVDWTQ FT NDKGQDITQGHYTQRNLVEAEARVYLPFNLTHNQRIRGIQPALTYYFTNNKYQEYHSRK FT FHNFQYILPEILFYDYRRKAQRDILPRTGYQLRLQYLKTPFNSENYGSLYAAHLTTYWP FT GIIRNHGLMIRVGYQYQDLDNKALYLPKHLLEKPRGYHFQYQTRQQWAFKADYALPLLS FT PDWSIGSLIYIRRLRANLFYDLSRNQASSKSRWINQSSYGGDLIFDWNVLRMSYPLTTG FT IRLIQPINYGKFQVEALFSISF" FT misc_feature complement(1309177..1309242) FT /note="Signal peptide predicted for BF1054 by SignalP 2.0 FT HMM (Signal peptide probability 1.000) with cleavage site FT probability 0.999 between residues 22 and 23" FT CDS complement(1309301..1310200) FT /transl_table=11 FT /locus_tag="BF9343_1009" FT /old_locus_tag="BF1055" FT /product="putative acetyltransferase" FT /note="N-terminus is similar to C-terminus of Pseudomonas FT putida acetyltransferase, Gnat family PP2073 SWALL:AAN67687 FT (EMBL:AE016781) (171 aa) fasta scores: E(): 2.9e-20, 42.65% FT id in 143 aa, and N-terminus is similar to N-terminus of FT Pseudomonas putida acetyltransferase, Gnat family PP1192 FT SWALL:AAN66816 (EMBL:AE016778) (162 aa) fasta scores: E(): FT 1.8e-19, 41.66% id in 144 aa, and N-terminus is similar to FT N-terminus of Pseudomonas syringae acetyltransferase, Gnat FT family PSPTO4020 SWALL:AAO57477 (EMBL:AE016870) (146 aa) FT fasta scores: E(): 2.3e-17, 38.73% id in 142 aa" FT /db_xref="GOA:Q5LGF0" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:Q5LGF0" FT /protein_id="CAH06790.1" FT /translation="MIEQPSPKVYDELLSIWEEAVRSTHHFLTEADIQFYKPLIRHEYL FT AAVRLYIIREDSGTIAAFMGLSNDCIEMLFVRPNAHGHGYGSRLVEFAIRKKRIYKVDV FT NEQNAAALGFYLHMGFETTGRDALDATGKPFPILHLQIPPIRLRKATLEDIDLLRTLFT FT QSVQNTCSTDYNRLQIQAWTGRGTLQRWHELFQSDLYFLLAEDSRKSQVAGFTSVNSKG FT YLHSMFVHPDYQRQGIASRLLLKAEEYVRIRQGVSVYSEVSITARPFFEKHGYSIEKEQ FT TVSVGDIEMTNFLMYKRI" FT misc_feature complement(1309373..1309591) FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 52.3, E-value FT 9.3e-13" FT misc_feature complement(1309838..1310047) FT /note="Pfam match to entry PF00583 Acetyltransf, FT Acetyltransferase (GNAT) family, score 59.8, E-value FT 5.1e-15" FT CDS complement(1310211..1311830) FT /transl_table=11 FT /locus_tag="BF9343_1010" FT /old_locus_tag="BF1056" FT /product="putative ribosomal large subunit pseudouridine FT synthase" FT /note="Similar to Anabaena sp. ribosomal large chain FT pseudouridine synthase A ALL4080 SWALL:Q8YPW0 FT (EMBL:AP003595) (549 aa) fasta scores: E(): 9e-47, 34.69% FT id in 513 aa, and in its C-terminal region to Escherichia FT coli, and Shigella flexneri ribosomal large subunit FT pseudouridine synthase A RluA or B0058 or SF0053 or S0055 FT SWALL:RLUA_ECOLI (SWALL:P39219) (218 aa) fasta scores: E(): FT 1.2e-22, 42.38% id in 210 aa" FT /db_xref="GOA:Q5LGE9" FT /db_xref="InterPro:IPR006145" FT /db_xref="InterPro:IPR006224" FT /db_xref="InterPro:IPR020103" FT /db_xref="UniProtKB/TrEMBL:Q5LGE9" FT /protein_id="CAH06791.1" FT /translation="MFHSFQTSIAGIELPRLFTYPFHYTPHPLCVMAAGEVQAYINKQT FT RWKEELDKGKMFGVLIVRTSSGQTGYLAAFSGNLCGSNSHSFFVPPVYDLLKPDGFFKI FT EEEQISAINHQIGQLQNCDRYLELQQKMERETVSSQQALSEARKVLKAAKEKREQRRLH FT RPNENEQAAMIRESQYQKAEFKRLERYWKEQISEIKTEMESFSSRIEALKAERRNRSAA FT LQQKLFQQFNFLNAKGETKNLCAIFEETVQKTPPAGAGECAAPKLLQYAYLSGLSPIAM FT AEFWWGESPKTEIRHHGYYYPSCRGKCEPILRHMLQGLDVEPAPSERYSLSQNMPEILF FT EDQWLLVLHKPEGVLSVPGKSEEQSIYSLLRARYPEATGPLVVHRLDMATSGLLLAAKA FT QEVHRHLQAQFENRSIKKRYIALLDGILPEEEGVIDLPICPDYLDRPRQMVNEELGKTA FT ITRYRVMDRKNGQTRIAFFPLTGRTHQLRVHAAHPLGLNCPIVGDELYGRKAERLYLHA FT EYLEFIHPVSGQRMVIEKKAEF" FT misc_feature complement(1310355..1310801) FT /note="Pfam match to entry PF00849 PseudoU_synth_2, RNA FT pseudouridylate synthase, score 176.7, E-value 3.2e-50" FT CDS complement(1311846..1314878) FT /transl_table=11 FT /locus_tag="BF9343_1011" FT /old_locus_tag="BF1057" FT /product="putative restriction enzyme of type III FT restriction-modification system" FT /note="Similar to Salmonella typhimurium type III FT restriction-modification system StylTI enzyme Res or FT STM0358 SWALL:T3RE_SALTY (SWALL:P40815) (990 aa) fasta FT scores: E(): 1.6e-15, 25.72% id in 972 aa, and to FT Escherichia coli O6 hypothetical protein c5372 SWALL:Q8FAC2 FT (EMBL:AE016771) (1023 aa) fasta scores: E(): 8.3e-155, FT 46.33% id in 1036 aa, and to Pasteurella multocida FT hypothetical protein Pm0699 SWALL:Q9CMV5 (EMBL:AE006106) FT (1043 aa) fasta scores: E(): 1.1e-102, 42.03% id in 1054 FT aa" FT /db_xref="GOA:Q5LGE8" FT /db_xref="InterPro:IPR006935" FT /db_xref="UniProtKB/TrEMBL:Q5LGE8" FT /protein_id="CAH06792.1" FT /translation="MKLKFKHQKFQEDAAKAVCDVFGGQPYKTFDYQVETRKKDGQTSF FT EKFTGFRNHPIVPQLTDEIVLKHIRDIQRAQQIKPSEALEGKYNLTIEMETGVGKTYTY FT IKTIFELNKRYGWCKFIIVVPSVAIREGVHKSLEIMKEHFASDYSTPLSYFIYDSKQLG FT ELNAFVTDSKIHVMIINSQKFNATNKDARRIYMKLDDFGGNCPIDVIAQMNPILIIDEP FT QSVEGVKTKEGLKRFNPLFTLRYSATHRELYNLVYRLDAMEAYNLQLVKKIAVKGISIS FT GTTATEGFVYLEGLNLYPDKNPTANIGFEVKRTKAVNQVVRALKINDDLYAKSNHLEEY FT RNDYVITDINGVEDSVTFRNGIKLYAGDVAGSVNETQLRRIQIRETILSHIEKEQELFE FT KDIKVLSLFFIDEVAKYRRYNPDGKGEYAEIFEQEYTDIIKHLDLSLFNQPEYIDYLKS FT TVASKAHEGYFSKDKKGKLIDSKTERGTKESADEDAYDLIMKNKERLLDRKEPIRFIFS FT HSALREGWDNPNVFQICTLKQSSAEVRKRQEVGRGLRLCVNGQGDRMDANVLGEEVHRV FT NLLTVIASESYESFAKGLQTEMAEAIADRPQKVTIQLFKDQSLRLANGETIIATEDIAQ FT SIYDSLLENKYIKKGELTDKFYEDRKQGEVIFDDELTDYKASIMTILASIYNPREMQPN FT DARKSKINLRLSKDKLENSKLQELLKLLCSKSTYTVKFDEKELVERAIESLNEKLRVSQ FT LYLSVITGQMEKIKSKAALISGEAFKVDANQAHYEKIDAMANDQVKYDLLGKLTDATNL FT TRQAVAQILSRIKPNVFGQFKNNPEDFIIKASELINEEKACLIVKHIEYTPIDQYYDVS FT VFTRATIQGRLGVNTIKADKHLYDHVRFDSQNEKTFMERLEENDEIEAYVKLPGNFYIP FT TPMGKYHPDWAIVFKQKLSKYPYFIAETKASDSSLQDRRIEEAKIECAKKHFAKTNGGK FT LKYNKVSSFEDLLKIVTQESV" FT misc_feature complement(1311870..1314878) FT /note="Pfam match to entry PF04851 ResIII, Type III FT restriction enzyme, res subunit, score 809.8, E-value FT 8.7e-241" FT CDS complement(1314900..1316894) FT /transl_table=11 FT /locus_tag="BF9343_1012" FT /old_locus_tag="BF1058" FT /product="putative modification enzyme of type III FT restriction-modification system" FT /note="Similar to Salmonella typhimurium type III FT restriction-modification system Stylti enzyme Mod or FT STM0357 SWALL:T3MO_SALTY (SWALL:P40814) (652 aa) fasta FT scores: E(): 2.6e-20, 30.31% id in 541 aa, and to FT Helicobacter pylori J99 type III DNA modification enzyme FT Mod_2 or jhp1411 SWALL:Q9ZJA2 (EMBL:AE001563) (641 aa) FT fasta scores: E(): 1.9e-54, 36.65% id in 603 aa, and to FT Pasteurella multocida hypothetical protein Pm0698 FT SWALL:Q9CMV6 (EMBL:AE006106) (636 aa) fasta scores: E(): FT 1.6e-53, 38.31% id in 676 aa" FT /db_xref="GOA:Q5LGE7" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR002295" FT /db_xref="InterPro:IPR002941" FT /db_xref="UniProtKB/TrEMBL:Q5LGE7" FT /protein_id="CAH06793.1" FT /translation="MEKLKMESVSIAEDSLNKIAELFPNVVTESMGKDGQLHKAIDFDK FT LKFLLTANQAEMGVVYDDDERYELTWVGKKQAIREVAHPIRKTLRPCPEESRNWEQTQN FT LYIEGDNLDAMKLLKKSYAGKVDVIYIDPPYNTGKDFIFNDTFALSQEESDEKQGRYNE FT EGQRLFQNTEANGKFHSDWCSMMYARLMLARTLLNDNGIIFISIDDHELANLIKIGNEV FT FNASNFIDVFNWAKTETPENLSKKSKQIIEYIVCYQKKKNDMKFQGLKKESVSSNGLLN FT QPNSVGILTFPANKVVTSIPDGVIKAGMYGTDAYDVELLEDTTVRGGLFTAPVKLKAKF FT KWSQANLDKEIQKGTTIKIPTLKLSPSYEKLEYDPEVPPNLINYKVGVETNEQAGNHQL FT QFFDKKVFNFPKPVSLIQYLCEFIDTKNKDCIVMDFFSGSGTTAEAVMRMNMKPRKNKV FT KYILVQLPEDVTETIKKAKTPSEKEIMQNAIDFLTENHKALNICELSKERIRRAGDTIE FT AECNQRKSKDLPDIGFRVFRIADSNMKDVYYSAKEYSQSDLFYFTDNIKEDRTGLDLLY FT GCLTNLGLSLSLPHDEEDINGYTVYSVDKTELMACFAEQIPEKVFREIAGRQPRRVVFR FT DASFRDSADRINIDEIFKTLSPGTTIEIL" FT misc_feature complement(1315464..1316318) FT /note="Pfam match to entry PF01555 N6_N4_Mtase, DNA FT methylase, score 30.0, E-value 4.9e-06" FT misc_feature complement(1316490..1316510) FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT CDS 1317351..1321217 FT /transl_table=11 FT /locus_tag="BF9343_1013" FT /old_locus_tag="BF1059" FT /product="putative glycosyl hydrolase" FT /note="Similar to Bacteroides thetaiotaomicron FT alpha-xylosidase BT3169 SWALL:AAO78275 (EMBL:AE016939) FT (1294 aa) fasta scores: E(): 0, 74.92% id in 1284 aa, and FT to codon 1300 of Clostridium perfringens hypothetical FT protein CPE1046 SWALL:Q8XLJ5 (EMBL:AP003189) (1965 aa) FT fasta scores: E(): 5.6e-132, 44.29% id in 1271 aa, and to FT codon 1335 of Enterococcus faecalis glycosyl hydrolase, FT family 31/fibronectin type III domain protein ef1824 FT SWALL:AAO81591 (EMBL:AE016952) (1866 aa) fasta scores: E(): FT 8.4e-128, 45.58% id in 1281 aa" FT /db_xref="GOA:Q5LGE6" FT /db_xref="InterPro:IPR000322" FT /db_xref="InterPro:IPR000421" FT /db_xref="InterPro:IPR003961" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR011013" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR016134" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR018247" FT /db_xref="UniProtKB/TrEMBL:Q5LGE6" FT /protein_id="CAH06794.1" FT /translation="MKNAIGNCRQRKAVLFALALPLMFSGSPAQAMHRSEIVREVTQQN FT LKIVSAKKINPTTIEVLFSNNQRMTFDFYGENIFRVFQDNAGGIIRDPEAKPEAQILVN FT NPRNTVSTLNLNDGSNLISITTGKIKVEIDKNTSLMKVIDLEKNTVVFEEVEPVLFDKG FT KVTVTLKENPNEYFYGGGVQNGRFSHKGKAINIVNENSWTDGGVASPAPFYWSTNGYGM FT MWYTFKPGKYDFGADEKGKVKLTHDSPYLDLFYMVSDGAVGVLNDFYQLTGNPVLLPKF FT GFYQGHLNAYNRDYWKEDEKGILFEDGKRYKESQKDNGGIKESLNGEKNNYQFSARAVI FT DRYKNHDMPLGWLLPNDGYGAGYGQTETLDGNIQNLKSLGDYARKNGVEIGLWTQSDLH FT PKEGVSALLQRDIVKEVRDAGVRVLKTDVAWVGWGYSFGLNGVADVGHIMPYYGNDARP FT FIISLDGWAGTQRYAGIWSGDQTGGVWEYIRFHIPTYIGSGLSGQPNISSDMDGIFGGK FT NMIVNTRDFQWKTFTPMQLNMDGWGSNEKYPHALGEPATSINRWYLKLKSELLPYTYSF FT AKEAVTGMPLIRAMFLEYPNAYTLGTATQYQFMYGTDFLVAPIYKATKADAEGNDIRDG FT IYLPEGEWIDYFTGEKYQGNCVLNNFAAPLWKLPVFVKNGAIIPMTNPNNNVAEINKGL FT RIYEIYPYKHMMTVEYDDDGISEAYKEGKGTTTFIESNVDSKNNVKISIRPTQGDFDGF FT VKEKATEFRVNVTAKPKKVSAQIGKGKVKLTEVSSMDDFRKGENVYFYDAAPNLNKFAT FT KGSEFEKKVITKNPQVLVKLAATDITKNQVVMDIEGFQYAPADNYRVTSGSLTAPAARI FT AAEDIEAYTLKPTWNKVPNADFYEIEFNGMLYTTIKDTELLFDGLAAETDYTFKIRSVN FT KDGYSDWAEFGAKTKANPLEFALHGIKGETTAKNQEGFDIDRLFDFAELGDMWHTKYGA FT KALPYDMIIDLRTVNQLDKFEYLPRTDGGNGTILKGTVYYSMDKENWTEAGAIDWKRNG FT DVKVFTFTERPTARYIKLAVTEGVNNYGSGRELYVFKVPGTESRLQGDINNDGKIDNND FT LTSYTNYTGLRKGDSDYEGYISVGDIDQNGLIDAYDISVVATQLEDGVSEEPIEKLDGT FT IEISTAKRNYSKGDVVEVLVKGVNLRSVNALSFALPYNQQDYEFVGVEPLNLKAMENLT FT YDRLHTNGTKALYPTFVNLGAKEALEGTNDLFILKLKAKRAVKFDLKAIDGVLVDKNLN FT TRKF" FT misc_feature 1317351..1317443 FT /note="Signal peptide predicted for BF1059 by SignalP 2.0 FT HMM (Signal peptide probability 0.999) with cleavage site FT probability 0.872 between residues 31 and 32" FT misc_feature 1317387..1317446 FT /note="1 probable transmembrane helix predicted for BF1059 FT by TMHMM2.0 at aa 13-32" FT misc_feature 1317666..1319651 FT /note="Pfam match to entry PF01055 Glyco_hydro_31, Glycosyl FT hydrolases family 31, score -282.8, E-value 1.6e-07" FT misc_feature 1320636..1320674 FT /note="PS00018 EF-hand calcium-binding domain." FT misc_feature 1320744..1320782 FT /note="PS00018 EF-hand calcium-binding domain." FT CDS complement(1321427..1322311) FT /transl_table=11 FT /locus_tag="BF9343_1014" FT /old_locus_tag="BF1060" FT /product="putative dehydrogenase/oxidoreductase" FT /note="Similar to Bacillus subtilis hypothetical FT oxidoreductase BacC SWALL:Q8KWT4 (EMBL:AF396778) (253 aa) FT fasta scores: E(): 5.4e-19, 31.74% id in 252 aa, and to FT Bacteroides thetaiotaomicron putative oxidoreductase BT1015 FT SWALL:Q8A902 (EMBL:AE016930) (295 aa) fasta scores: E(): FT 8.4e-86, 74.91% id in 295 aa, and to Geobacillus FT thermoleovorans short chain alcohol dehydrogenase Bt-adH FT SWALL:Q9LBG5 (EMBL:AB040809) (249 aa) fasta scores: E(): FT 2.9e-38, 50.2% id in 247 aa" FT /db_xref="GOA:Q5LGE5" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020904" FT /db_xref="UniProtKB/TrEMBL:Q5LGE5" FT /protein_id="CAH06795.1" FT /translation="MADNYIERQYEQYEARKAAWEKARKYGKKKTGITHPARTEQPGQT FT TTEPHHYKRVFVTGGANGIGKAIVEIFCKSGYRVAFCDKDGIAGKRTAEETGAIFHQVD FT ISDKDMLEHCMQSIIEEWDDIDILINNAGISDFSPITETSIEDFDRILSINLRPVFITS FT RFIAIHRQSQTTSNPYGRIINICSTRYLMSESGSEGYAASKGGIYSLTHALALSLAQFH FT ITVNSIAPGWIQTHDYDRLRPEDHAQHPSRRVGKPEDIARMCRFLCEEGNDFINGENIT FT IDGGMTKKMIYTE" FT misc_feature complement(1321454..1322161) FT /note="Pfam match to entry PF00106 adh_short, short chain FT dehydrogenase, score 197.2, E-value 2.2e-56" FT misc_feature complement(1321667..1321753) FT /note="PS00061 Short-chain dehydrogenases/reductases family FT signature." FT CDS 1322416..1322580 FT /transl_table=11 FT /locus_tag="BF9343_1015" FT /old_locus_tag="BF1061" FT /product="conserved hypothetical protein" FT /note="Similar to Leptospira interrogans hypothetical FT protein la0393 SWALL:Q8F904 (EMBL:AE011226) (61 aa) fasta FT scores: E(): 5.1, 40% id in 40 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGE4" FT /protein_id="CAH06796.1" FT /translation="MVGKSDFALFSALNFCKDNAFFRYKKTNEKTLIKKAISGANFSFF FT DAENVLYYF" FT CDS complement(1322599..1322775) FT /transl_table=11 FT /locus_tag="BF9343_1016" FT /old_locus_tag="BF1062" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGE3" FT /protein_id="CAH06797.1" FT /translation="MLRISSYDENGIVFLSEGQKNWPKKHQGIDLIFALFIFWIANFSP FT QFVPEAFHKNIIY" FT misc_feature complement(1322632..1322685) FT /note="1 probable transmembrane helix predicted for BF1062 FT by TMHMM2.0 at aa 31-48" FT misc_feature complement(1322976..1322999) FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(1323128..1323304) FT /transl_table=11 FT /locus_tag="BF9343_1017" FT /old_locus_tag="BF1064" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGE2" FT /protein_id="CAH06798.1" FT /translation="MQKAGKMQYNTYMQNNEIQQLAFIPTFCVLVKTEVVHKHLRDSIL FT PAVLVFISLHSRR" FT CDS 1323557..1324951 FT /transl_table=11 FT /locus_tag="BF9343_1018" FT /old_locus_tag="BF1066" FT /product="putative ATP/GTP-binding protein" FT /note="Similar to Bifidobacterium longum hypothetical FT protein bl0253 SWALL:Q8G7L1 (EMBL:AE014643) (456 aa) fasta FT scores: E(): 4.3e-38, 41.34% id in 445 aa, and to FT Bifidobacterium longum hypothetical protein bl0619 FT SWALL:Q8G6M0 (EMBL:AE014683) (437 aa) fasta scores: E(): FT 2.5e-33, 35.47% id in 451 aa, and to Fusobacterium FT nucleatum ATPase FN1101 SWALL:Q8REJ9 (EMBL:AE010615) (470 FT aa) fasta scores: E(): 3.9e-27, 33.63% id in 443 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGE1" FT /protein_id="CAH06799.1" FT /translation="MLKRKIETFLAKWKKSEDRKPLVIKGIRQCGKTYIVQKFAKENYE FT SVVYMNFILEPDKKSAFTGNIDVDTIILNLSALIQGSRFINGKTCIILDEIQECKEART FT ALKSFHIDGRFDVIATGSLLGVKGYDKSKKKKEEEEGQDSVPVGYETVIDMYPLDFEEF FT LWANGISDMVIDSVKSCFENESTVPDGIHKAMMELLYRYVIVGGLPEVVNCFLETKNIE FT LIYKVQRNLIAEYEEDMVKYADDPDKPRIRECFESIPKQLAKENKKFQYSVVKKGGRAS FT QYIGSIQWLEDAGIVRRCYNTQITELPLEGNSIKGSFKVYTTDIGILMAMLDYGTQADI FT LKGNLLGYKGAIFENLMADFLCKSGQKLYYFHKDSGLELDFLVRFKGECVILEVKAKTG FT KAKSMTTVLKNKDVYYVNNAIKLGQYNVGCEGDILTIPLYMGFLVEDKLADVIIPDVDV FT SLLTTI" FT misc_feature 1323632..1323655 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 1324963..1325589 FT /transl_table=11 FT /locus_tag="BF9343_1019" FT /old_locus_tag="BF1067" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGE0" FT /protein_id="CAH06800.1" FT /translation="MAKQILVGIKKQSLNEVAHYLMIYFPYNEEMCSYANDWLGELYEN FT KYPLVSKGMWSGIIDLKTHKLLDWKPEYGDLYFQAKVCDSGTYILLDKDKKVICKIADY FT VPNGLIPEAADCGDYIRLRIKHDGMIENWIEKPDFSDFIEDSETVEKIDTSIEEETILD FT IKVEFTYSQLMANLLRLPKYLQMEIGKTLIANASEGFEKDVIGQK" FT CDS 1325655..1327487 FT /transl_table=11 FT /locus_tag="BF9343_1020" FT /old_locus_tag="BF1068" FT /product="possible type I restriction-modification system FT protein" FT /note="Similar to Campylobacter jejuni type I FT restriction-modification system RloF SWALL:Q8G8B7 FT (EMBL:AF542644) (554 aa) fasta scores: E(): 1.8e-16, 23.83% FT id in 579 aa, and to Campylobacter jejuni type I FT restriction-modification system RloF SWALL:Q8GN07 FT (EMBL:AF542651) (555 aa) fasta scores: E(): 4.9e-16, 26.7% FT id in 468 aa, and to Campylobacter jejuni type I FT restriction-modification system RloF SWALL:Q8RN41 FT (EMBL:AF486548) (555 aa) fasta scores: E(): 4.9e-16, 26.7% FT id in 468 aa" FT /db_xref="InterPro:IPR004919" FT /db_xref="InterPro:IPR011089" FT /db_xref="UniProtKB/TrEMBL:Q5LGD9" FT /protein_id="CAH06801.1" FT /translation="MIQSVNKYHIYEILSSDGNFYYTIPKYQREYTWSYREWEALYDDI FT SENNDEYFIGSIICIPLGDTINPYLEVIDGQQRLTTISLFLTAIYTRLKEHLDYLSEDD FT GDVLPSLRKSLKSKNSPNEMKLVPQVQNFNKDDYDYLLNEVGLRKATAPKHAYYPMRKI FT ARCYTYFLKRLDKEMEGMDGDNAVNFLLGKYNKVKQAMLVKIEVSTHSDAYVLFESLNN FT RGTPLTAIDLMKNLIMARAESNNLTIDDCFNRWQMLLGNLSDDYGIQERFFRHYYNAFK FT HRLNEPFQSDNDRKKDPLGVVATRSNLLNIFENLINKDLPSFLDDILHCGQIYSWLILQ FT DSAETTYRKALEDLDHIQGAPSYLLLMYLMRNKKELAITENQINLFTRLLSKYFVRRNI FT TDYPNTRDLTRIFMDIISKIEESNSVGNDVMTLIIDMLSTPANCASDEQFRRSLEGDVY FT KDNVGATRYILCKLAESAMTQETWTDLWRRTDKKVFVWTIEHIFPEGENIPQCWVDMIA FT NGDKNLAQKYLEEYTHKIGNLTITGYNSTLGNKSFEEKRDRKSKDGKRFIGYKNGLEIN FT REIATKDIWTIEDIKARTTDLVNKLIEIYEFPGK" FT misc_feature 1325679..1326395 FT /note="Pfam match to entry PF03235 DUF262, Protein of FT unknown function DUF262, score 73.6, E-value 3.4e-19" FT CDS 1327737..1328012 FT /transl_table=11 FT /locus_tag="BF9343_1021" FT /old_locus_tag="BF1069" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGD8" FT /protein_id="CAH06802.1" FT /translation="MDKRNKLWRRQQMARVFKARMILYAAYGRCIIREDGSYYEHPHWF FT ELAKEKWTQVYKTTGTPCSCWMCRGFEYDRKEYKEETRRIIWESME" FT CDS 1328505..1329089 FT /transl_table=11 FT /locus_tag="BF9343_1022" FT /old_locus_tag="BF1070" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4528 SWALL:AAO79633 (EMBL:AE016945) FT (194 aa) fasta scores: E(): 3.3e-72, 88.88% id in 189 aa, FT and to Rhizobium meliloti hypothetical protein rb0384 FT rb0384 or smb20398 SWALL:Q92WF5 (EMBL:AL603643) (164 aa) FT fasta scores: E(): 6.6e-12, 35.67% id in 171 aa, and to FT Methanococcus jannaschii hypothetical protein Mj1445 mj1445 FT SWALL:YE45_METJA (SWALL:Q58840) (176 aa) fasta scores: E(): FT 1.3e-11, 37.15% id in 183 aa" FT /db_xref="GOA:Q5LGD7" FT /db_xref="InterPro:IPR004843" FT /db_xref="UniProtKB/TrEMBL:Q5LGD7" FT /protein_id="CAH06803.1" FT /translation="MNCKFEGSKVFFTSDTHFYHGNIIRFCNRPFKDVGMMNETIISNW FT NNTVGLDDIVFHLGDFCLGGSAEWTKILDRLNGKIYLILGNHDLKNLRQGYVDRFEHLA FT MQMHIEVNKQKIYLNHYPFLCFDGGYKDVWQLFGHVHTRNNNTGIDATRLQHLYPTQYD FT VGVDNNNFMPVSFAQVKTIIEKQIKQSKMEE" FT misc_feature 1328526..1328933 FT /note="Pfam match to entry PF00149 Metallophos, FT Calcineurin-like phosphoesterase, score 39.1, E-value FT 8.7e-09" FT CDS 1329089..1329856 FT /transl_table=11 FT /locus_tag="BF9343_1023" FT /old_locus_tag="BF1071" FT /product="conserved hypothetical protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein BT4526 SWALL:AAO79631 (EMBL:AE016945) FT (255 aa) fasta scores: E(): 6.8e-85, 75.29% id in 251 aa, FT and to Microscilla sp. PRE1 ms153 SWALL:Q93P78 FT (EMBL:AF339846) (253 aa) fasta scores: E(): 6.9e-27, 33.98% FT id in 256 aa, and to Microscilla sp. PRE1 ms152 FT SWALL:Q93P79 (EMBL:AF339846) (260 aa) fasta scores: E(): FT 8e-26, 35.87% id in 262 aa" FT /db_xref="GOA:Q5LGD6" FT /db_xref="InterPro:IPR024654" FT /db_xref="UniProtKB/TrEMBL:Q5LGD6" FT /protein_id="CAH06804.1" FT /translation="MKIQYMSDLHLEFGENSRYLKHNELPATGDMLVLAGDIFYLRDRI FT APMVKFWKWASDNYKQVLIVPGNHEYYNYSDVMERGLQWKWMFRKNVGYYQNQVIRIDD FT TDFVLSTLWSRINPNDKYFVWKGMNDFRQIKFDGKLLQVEEFNRMHEICMDFIQKSVEE FT STASHIVVVTHHLPTFKVVAPQHKNSVLNSAFASEYGSWIAHSRIDAWIYGHSHSNIDT FT KIGSTRVICNQMGYVFANEHLVNGFNPEKYVEI" FT misc_feature 1329089..1329745 FT /note="Pfam match to entry PF00149 Metallophos, FT Calcineurin-like phosphoesterase, score 51.3, E-value FT 1.8e-12" FT CDS 1329870..1331183 FT /transl_table=11 FT /locus_tag="BF9343_1024" FT /old_locus_tag="BF1072" FT /product="hypothetical protein" FT /note="N-terminus is similar to C-terminus of Vibrio FT parahaemolyticus hypothetical protein vpa1429 SWALL:Q87G88 FT (EMBL:AP005088) (681 aa) fasta scores: E(): 5.7, 34.28% id FT in 70 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGD5" FT /protein_id="CAH06805.1" FT /translation="MNERIIDRKLFVDLAKEVGLNASHIEAMGEMRHCEITVSGNMLKR FT LVEIQRQFERLAVMGDDEHRGFYIEVPRPTPEEWGDIEKLIASGEYQSKEAFLADWLAF FT NPTETQWFHVASYRYEEFRSICVTDRKHTHFVIMNRSSCADGESDNAWYCDSLARLFDY FT LQRLVDVIVANPDGLNDYVAHNLPYQQRTGRIARKELNRIAPKFKIEVEDRETAIRALE FT DLVKEHFRPHLKTMTIRQYCMYYRIANEVYEAYYRKRGVGNRIYKEQSNVPEELRDIAY FT YTRVKFVDVDRLYDIDSPEDFIRFATDHYSELGLSRLNVIASKVSQQGWMIVISNSYSA FT NVGLAIEVATALYKTGVPLLIHDAEKLLRILREEGYVWLIPNSYHNYMGYQEEDTVYEL FT PWKYECSDDGESVLTLEQYNSIVSLAEWQDEKLVNPVA" FT CDS 1331371..1331697 FT /transl_table=11 FT /locus_tag="BF9343_1025" FT /old_locus_tag="BF1073" FT /product="putative DNA-binding protein" FT /note="Similar, but truncated at the C-terminus, to FT Escherichia coli O6 hypothetical protein c5295 SWALL:Q8FAI3 FT (EMBL:AE016771) (163 aa) fasta scores: E(): 1.8e-10, 48.59% FT id in 107 aa" FT /db_xref="GOA:Q5LGD4" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:Q5LGD4" FT /protein_id="CAH06806.1" FT /translation="MNMTKNTMGTKLPRKLEQKMAVVGEQIKLARLRRNLSVAQVAERA FT TCSPLTVSRIEKGAPTVAIGIYLRVLYALQLDDDILWLAKEDKLGKTLQDLSLKTRERA FT SKKE" FT misc_feature 1331449..1331613 FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 31.8, E-value 1.4e-06" FT misc_feature 1331476..1331541 FT /note="Predicted helix-turn-helix motif with score FT 1488.000, SD 4.25 at aa 36-57, sequence FT LSVAQVAERATCSPLTVSRIEK" FT CDS 1331701..1332960 FT /transl_table=11 FT /locus_tag="BF9343_1026" FT /old_locus_tag="BF1074" FT /product="conserved hypothetical protein" FT /note="Similar to Arthrobacter nicotinovorans hypothetical FT protein SWALL:Q8GAL5 (EMBL:AJ507836) (458 aa) fasta scores: FT E(): 5.4e-27, 31.53% id in 390 aa, and to C-terminal 200 FT amino acids of Escherichia coli O6 hypothetical protein FT c5297 SWALL:Q8FAI1 (EMBL:AE016771) (203 aa) fasta scores: FT E(): 1.2e-23, 39.26% id in 191 aa, and to N-terminal 190 FT amino acids of Escherichia coli O6 hypothetical protein FT c5296 SWALL:Q8FAI2 (EMBL:AE016771) (195 aa) fasta scores: FT E(): 2.6e-16, 35.97% id in 189 aa, and to entire FT Pseudomonas syringae conserved domain protein PSPTO0522 FT SWALL:AAO54065 (EMBL:AE016857) (408 aa) fasta scores: E(): FT 2.2e-14, 29% id in 400 aa" FT /db_xref="InterPro:IPR012893" FT /db_xref="InterPro:IPR012894" FT /db_xref="UniProtKB/TrEMBL:Q5LGD3" FT /protein_id="CAH06807.1" FT /translation="MKTLYVYADFDWLKETELVGELGYESLRGSDSYCFTFSNEWLKKH FT GDLFLSDDLNNYPGQQYTQPEKDIFGCFSDSLPDRWGRTLLLRREQITAMEEKRPVRRL FT SSFDFLTGIDDFSRMGAFRFKESKDGGFINVSESLKIPPLTDIRELIAASAEIEKSEEG FT NVLPDKKWVAQLVQPGSSLGGARPKASVIDTDKTLYVAKFPSRKDDYDAGLWEHFSHLL FT AIKAGINAAKTKVLATGEKYHTLLSQRFDRTQEGKRIHFASAMTLLGLNDGDNATTGHG FT YLDIVDFIIQNCTNVEDNLQELYRRAAFNICIGNSDDHFRNHGFLLTAKGWTLSPAYDM FT NPTLNEYQSLLISSTSNKADLNILLDACEDYMLNRKAAKKIISEVIGTIKEWRELATRL FT GISKRGMDMFAGVLNKRCKE" FT CDS 1333290..1333511 FT /transl_table=11 FT /locus_tag="BF9343_1027" FT /old_locus_tag="BF1076" FT /product="putative DNA-binding protein" FT /note="Similar to Bacteroides thetaiotaomicron hypothetical FT protein BT3153 SWALL:Q8A302 (EMBL:AE016939) (114 aa) fasta FT scores: E(): 6.2e-10, 48.33% id in 60 aa, and to FT Bacteroides thetaiotaomicron hypothetical protein BT4529 FT SWALL:Q89Z48 (EMBL:AE016945) (89 aa) fasta scores: E(): FT 8.3e-08, 50.84% id in 59 aa" FT /db_xref="GOA:Q5LGD2" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="PDB:3BS3" FT /db_xref="UniProtKB/TrEMBL:Q5LGD2" FT /protein_id="CAH06808.1" FT /translation="MSNNQQMMLNRIKVVLAEKQRTNRWLAEQMGKSENTISRWCSNKS FT QPSLDMLVKVAELLNVDPRQLINGKIKI" FT misc_feature 1333323..1333487 FT /note="Pfam match to entry PF01381 HTH_3, Helix-turn-helix, FT score 43.6, E-value 3.7e-10" FT misc_feature 1333350..1333415 FT /note="Predicted helix-turn-helix motif with score FT 2175.000, SD 6.59 at aa 21-42, sequence FT RTNRWLAEQMGKSENTISRWCS" FT CDS 1333514..1336186 FT /transl_table=11 FT /locus_tag="BF9343_1028" FT /old_locus_tag="BF1077" FT /product="putative modification protein of type I FT restriction-modification system" FT /note="Similar to Helicobacter pylori J99 type I FT restriction enzyme Hsdm_3 or jhp1423 SWALL:Q9ZJ91 FT (EMBL:AE001564) (815 aa) fasta scores: E(): 1.4e-78, 37.56% FT id in 905 aa, and to Helicobacter pylori type I restriction FT enzyme M protein hp1403 SWALL:O25953 (EMBL:AE000640) (817 FT aa) fasta scores: E(): 1.3e-75, 37.08% id in 906 aa, and to FT Methanosarcina mazei type I restriction-modification system FT specificity subunit Mm2294 SWALL:Q8PUN8 (EMBL:AE013471) FT (808 aa) fasta scores: E(): 1.2e-61, 41.34% id in 895 aa" FT /db_xref="GOA:Q5LGD1" FT /db_xref="InterPro:IPR002296" FT /db_xref="InterPro:IPR003356" FT /db_xref="InterPro:IPR022749" FT /db_xref="UniProtKB/TrEMBL:Q5LGD1" FT /protein_id="CAH06809.1" FT /translation="MAIKKTQLYSILWESCNILRGSMDASQYKNYVLTMLFLKYISDKV FT QSDSDIFFDLPEGCFFNDIVALKGKPNIGEEIQKKLHVIARANPRLDHIINEADFDDST FT KLGTGKAKVDTLTSLISVFQRDFLDFSKNRAGDDDLIGDAYEYLMKNFAAESGKKKGQF FT YTPAEVSRLMARLIGIHKDNRPQISIYDPTCGSGSLLLRAAAEYTKHRDGVSIFGQELD FT GATRGMAVMNMYLHGYDDPELEVGDTIEKPFFKSTPNQLETFNYVVANPPFSQKGWIKG FT EIKINDTFGRWGNSDNLPPIPPIGYEDYAFLLHIIKSINSQGRGACILPNGVLFRGNEE FT EAVRRKIIEKRYIRGIISLPTNLFFGTGIPACIVIIDKAKTSTSKGIFMIDARSGFTKD FT GAKNRLREQDIRRVFDAWEALENLEANGNLDDKEETIPHYARFVPYTEITNERNDCNLN FT VSRYITPVDTEIQQDLYAHLKLNGGLPTKDVEEGFSYLWRHCPTLKNELFEPLEENYYK FT LRVGRNEIPNTIIHNKEFSTLSGFFSDAIEEWYKLVSQQMFALAPGCQPKKLIADWSES FT LLEMLSEIDGLVDKYTIYDILLNYWNSAMQDDCYLISRYGWTVELSCDVLTTDKKSKEV FT KFVPKKNPTFRDYNCDLLPVHVVVNHYFKEENEAVNEAEERVSQLKGEIEQMEEEYPEE FT LNDTVTEIISKYIYAICPKPLKGEKDVLETYLAINEKGKIGKEKREAIIAKNRNVFDRL FT SDMSVNAIKYRLKEVVNYAALPDDTIKLYKQYIDLNRELANAKTDVKQKISKLTKLVVA FT KYPTLQESEIKGMVVNDKWHTAIVGGAISAAFDVTVDIEQQVTALVDRYARRLSDIDAS FT VRELEEKVNAHLAKMGFEL" FT misc_feature 1333523..1334179 FT /note="Pfam match to entry PF02506 Methylase_M, Type I FT restriction modification system, M protein, score 236.9, FT E-value 2.4e-68" FT misc_feature 1334312..1334332 FT /note="PS00092 N-6 Adenine-specific DNA methylases FT signature." FT misc_feature 1334336..1334881 FT /note="Pfam match to entry PF02384 N6_Mtase, N-6 DNA FT Methylase, score 140.8, E-value 2.1e-39" FT CDS 1336183..1337367 FT /transl_table=11 FT /locus_tag="BF9343_1029" FT /old_locus_tag="BF1078" FT /product="putative modification protein of type I FT restriction-modification system" FT /note="Similar to Methanosarcina mazei type I FT restriction-modification system specificity subunit MM2293 FT SWALL:Q8PUN9 (EMBL:AE013471) (406 aa) fasta scores: E(): FT 1.2e-21, 30.19% id in 414 aa, and to Lactococcus lactis FT HsdS subunit SWALL:O68173 (EMBL:AF013596) (395 aa) fasta FT scores: E(): 1.5e-16, 21.41% id in 397 aa, and to FT N-terminus of Escherichia coli HsdS protein SWALL:Q47280 FT (EMBL:X73984) (406 aa) fasta scores: E(): 5.1e-16, 37.01% FT id in 154 aa" FT /db_xref="GOA:Q5LGD0" FT /db_xref="InterPro:IPR000055" FT /db_xref="UniProtKB/TrEMBL:Q5LGD0" FT /protein_id="CAH06810.1" FT /translation="MIETKFKQTELCRIPEDWDIGTFADFLITFSAGATPYRGIPDNFV FT GTIPWISSGELNYCEIENTREHISSDAQKNTHLTLHKPGTFLIAITGLEAAGTRGRCAF FT VKTPATTNQSCLAINSTDKMTVKYLFWFYRQWSDFLAFNFSQGSKQQSFTAEIVKRLPL FT YAPKYKEQEKIAEALSDVDKLIRELDTLIEKKRAVMQGTMQELLTAHRRLPGFVHPWRN FT TLVEKCCKITTGESNTRDQIESGIYPFYIRSATVMRSNSYIFDCEGVITIGDGQIGKVF FT HYVNGKFDLHQRCYLMYDFDDIDVKFFYFLFSFFFYNRVIALSAKATVDSVRRNMIAKM FT KINIPSTMQEQKAIANILSDMNDGIEAIEAKRDKYIAVRQGMMQQLLTGKIRLI" FT misc_feature 1336234..1336731 FT /note="Pfam match to entry PF01420 Methylase_S, Type I FT restriction modification DNA specificity domain, score FT 30.7, E-value 2.9e-06" FT misc_feature 1336840..1337271 FT /note="Pfam match to entry PF01420 Methylase_S, Type I FT restriction modification DNA specificity domain, score FT 69.7, E-value 5.1e-18" FT CDS 1337364..1340558 FT /transl_table=11 FT /locus_tag="BF9343_1030" FT /old_locus_tag="BF1079" FT /product="putative type I restriction enzyme" FT /note="Similar to Methanosarcina mazei type I FT restriction-modification system restriction subunit MM2292 FT SWALL:Q8PUP0 (EMBL:AE013471) (1042 aa) fasta scores: E(): FT 4.4e-72, 42.64% id in 1020 aa, and to Helicobacter pylori FT J99 type I restriction enzyme HsdR_3 or jhp1424 FT SWALL:Q9ZJ90 (EMBL:AE001565) (991 aa) fasta scores: E(): FT 2.2e-64, 37.51% id in 1069 aa, and to Helicobacter pylori FT type I restriction enzyme R protein hp1402 SWALL:O25952 FT (EMBL:AE000640) (993 aa) fasta scores: E(): 1.1e-60, 37.08% FT id in 1049 aa, and to Klebsiella pneumoniae HsdR protein FT SWALL:Q48426 (EMBL:U33094) (1013 aa) fasta scores: E(): FT 1.3e-57, 41.47% id in 1056 aa" FT /db_xref="GOA:Q5LGC9" FT /db_xref="InterPro:IPR004473" FT /db_xref="InterPro:IPR006935" FT /db_xref="InterPro:IPR007409" FT /db_xref="InterPro:IPR014001" FT /db_xref="UniProtKB/TrEMBL:Q5LGC9" FT /protein_id="CAH06811.1" FT /translation="MNTIPLVDSERTTQNRVVNLLHDYCGYQYLGYKQDADNLPIIPEI FT LGKFIKDTQHASNTEIDKVFRLLDLEISRCHDKDTLFQSNLNFYSYLRYGVNIQGDDGQ FT SKTVKIIKWSEDNVADNIFSLAEEVTVRRNIEEYHTRRPDIVVYVNGMALGVIELKKST FT VSVKDGVRQQIRNNGRDNEICHFFVPAQFLFAGNDSEGVHYGTILTPEKFWLRWKEPTG FT QSYPNDTSTPEPIPELFPRTEFPNELDRSLLQMLEPKRILRLIHDCVVYDGGIKKVCRP FT NQYFAFEAAKPRIRNKQSGIIWHSQGAGKSLMMVWLAQWILENMPNDPRVVIITDRDEL FT DKQIENGFKDAGHKPIRAKSGNHLLSMLSEVEPNLICTLIHKFGIAGQEESAFSAEEKK FT LRGKRSPEQYMAALAEKLPKGFKAKGNIFVFVDECHRTQGGILNKAMKKIMGDDVMLIG FT FTGTPLLKQQKSKLTSRENFGNYIHTYKFNEAVKDQVILDLRYEAREIEQNLENEQAVD FT QLFEHITRNLSSKAKEELKSRWAVMKNLFSSRDRVRKIVADIVKDMQLISCLREGWGNA FT MLVCDSIYQAYRCWEVFQETQLKGHCAVVSSFNGKDASPEESSSGETQSEAEYKAEMAK FT KMFKDRTPEEFEEWAKTQFVDHPGDMKLLIVVSKLLTGFDAPSATYLYLDKKMEGHDLF FT QAICRVNRTNNEYEEKEFGYIVDYKQLFKNIEDAVNDYTTGAFSDYDKEDVEGLLTDRF FT ENAKRDLDTALERVEHLCEPVAHPKTTNEFFDYFVFDQRSTEPNEEEAATIQSAPIREA FT FYNAVKILVTRYSAIALEMERAGYTTEEAQTIFERIKNFDNIRNAIMRRAGDIVDMKLY FT DQQMRNILDMYIDAKSSKVLAMLEDFSFLDLVLDSNSEEAEHEAEEALGGKDGVASTIT FT ANVRRVVNRKRESNPEEYRKFSERINRLLAEYRQGVLDYKEYLKAIAELARELGNRTFD FT PRLDTQGKQALFDNLGEDVALTLEVYQLIKVNAKQGFRTNDVKKAKLRRALESFTASKP FT FDVDDILRIVINNPEF" FT misc_feature 1337385..1337999 FT /note="Pfam match to entry PF04313 HSDR_N, Type I FT restriction enzyme R protein N terminus (HSDR_N), score FT 97.6, E-value 2.1e-26" FT CDS 1340558..1341268 FT /transl_table=11 FT /locus_tag="BF9343_1031" FT /old_locus_tag="BF1080" FT /product="conserved hypothetical protein" FT /note="Similar to Methanosarcina mazei zinc metalloprotease FT MM2291 SWALL:Q8PUP1 (EMBL:AE013471) (238 aa) fasta scores: FT E(): 6.1e-32, 39.28% id in 224 aa, and to Helicobacter FT pylori hypothetical protein Hp1401 SWALL:O25951 FT (EMBL:AE000640) (235 aa) fasta scores: E(): 9.5e-31, 38.22% FT id in 225 aa, and to Helicobacter pylori J99 putative FT jhp1425 SWALL:Q9ZJ89 (EMBL:AE001565) (235 aa) fasta scores: FT E(): 5.2e-30, 36.6% id in 224 aa" FT /db_xref="InterPro:IPR002725" FT /db_xref="UniProtKB/TrEMBL:Q5LGC8" FT /protein_id="CAH06812.1" FT /translation="MHIINVADIEIEVERKSIKNLHLAVYPPDARVHISMPDYLADDDA FT RNFVLQKLEWLRTQIEEVLAQPRQTKRQFVSGESHYLFGQRYQLIVEELPHYANNMELK FT GNKLYMFLKPGTSIETRAELMRTWYRYHLKKELESMLQCWANKLKENPFKWQVKQMKTE FT WGSCIPSKRLLIFNLELARVPRECIEFVIVHEFCHFKVDTHNKIFEMLMNKRLPNWRTL FT RQKLNTFVALPYKE" FT misc_feature 1340585..1341250 FT /note="Pfam match to entry PF01863 DUF45, Protein of FT unknown function DUF45, score 149.5, E-value 5e-42" FT CDS 1341277..1342524 FT /transl_table=11 FT /locus_tag="BF9343_1032" FT /old_locus_tag="BF1081" FT /product="hypothetical protein" FT /note="C-terminus is similar to C-terminus of Listeria FT innocua hypothetical protein Lin2940 SWALL:Q926V0 FT (EMBL:AL596174) blast scores: E(): 0.007, score: 44 26% id" FT /db_xref="UniProtKB/TrEMBL:Q5LGC7" FT /protein_id="CAH06813.1" FT /translation="MNRIILIGNGFDLAHGLPTRYEDFINWYWEKRVDSFIGNLTPISE FT DCLCSIKITSDNYNRCWNVFAFCLPKFFNKPSGKEIIDSIANDSKSFELSLSPFFFNIC FT TCIETKGWVDIEKEYYDLLRNAIINPDNCNYTISEINKQLHYIQGLLAQYLSSITTDNI FT KCNKEIQRQIYGNIRKDDVSISQLQVYYDYVDHLIQQDNVYQQLLCRYGYESSDRHFMA FT EDIKQLRKQFVGSSEIEEIYLKDLIFPENIVLLNFNYTEVADKYGCLKVASTNHIHGDL FT NNPDSIIFGYGDELDEDYRDFLKQSDNECLRNIKSIKYLESGKYRNLLQFIESAPYQVY FT IMGHSCGNSDRTLLNTLFEHKNCVSIKPYYYQKDDGSDNYLEIAQNICRNFTDMKLMRD FT RVVNKMFCEPLPQYIK" FT misc_feature 1342045..1342110 FT /note="Predicted helix-turn-helix motif with score FT 1033.000, SD 2.71 at aa 257-278, sequence FT FNYTEVADKYGCLKVASTNHIH" FT CDS 1342848..1343057 FT /transl_table=11 FT /locus_tag="BF9343_1033" FT /old_locus_tag="BF1082" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGC6" FT /protein_id="CAH06814.1" FT /translation="MHKRRYFSTEIREAFSKPYVKVYFLDDSIAKDAKEVVERLNVVKT FT VSITPSNSKDHPGNTLTVCPKSMV" FT misc_feature 1342848..1343045 FT /note="PS00430 TonB-dependent receptor proteins signature FT 1." FT CDS 1343079..1343552 FT /transl_table=11 FT /locus_tag="BF9343_1034" FT /old_locus_tag="BF1083" FT /product="conserved hypothetical protein" FT /product="hypothetical protein" FT /note="Similar to C-terminus of Vibrio parahaemolyticus FT hypothetical protein vp1826 SWALL:BAC60089 (EMBL:AP005079) FT (273 aa) fasta scores: E(): 1.7e-14, 36.18% id in 152 aa" FT /note="Similar, but truncated at the N-terminus, to Vibrio FT parahaemolyticus hypothetical protein vp1826 SWALL:Q87NP2 FT (EMBL:AP005079) (273 aa) fasta scores: E(): 2e-14, 36.18% FT id in 152 aa, and to Escherichia coli, and Salmonella FT typhimurium endonuclease NuC SWALL:Q46707 (EMBL:U09868) FT (177 aa) fasta scores: E(): 1.4e-06, 31.45% id in 124 aa, FT and to Wigglesworthia glossinidia brevipalpis wg002 protein FT or wigbr3400 SWALL:Q8D2L4 (EMBL:AB063522) (183 aa) fasta FT scores: E(): 2.2e-06, 28.22% id in 163 aa" FT /db_xref="GOA:Q5LGC5" FT /db_xref="InterPro:IPR001736" FT /db_xref="UniProtKB/TrEMBL:Q5LGC5" FT /protein_id="CAH06815.1" FT /translation="MVEALNRFFLRSVLADRKPVRNDAYFNDIADKIIKELDKARVSIH FT VCIAWFTNQSIADKLVEKHKQGIDVKVIFYDDYTNSKFGVNIDGIPFKTIRGSRGGLMH FT NKYCVIDNQIVITGSYNWSENAENKNDENAAVMYDYDRTSDYSVEFRKMFGSE" FT CDS <1344828..1345154 FT /transl_table=11 FT /locus_tag="BF9343_1035" FT /old_locus_tag="BF1088" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGC4" FT /protein_id="CAH06816.1" FT /translation="NLSIMTFREFMKENGYEVKTKFWEDFSLAERFGLSAIQDTFNRAF FT KEWKEDYEFLTELVLVLNHKIWQYHEKRPEFAELYNTLEEQTDQYAMENLKDEELSYFF FT DVTD" FT CDS 1345330..1345599 FT /transl_table=11 FT /locus_tag="BF9343_1036" FT /old_locus_tag="BF1089" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGC3" FT /protein_id="CAH06817.1" FT /translation="MLEITIAELQKLGESEDHIEFKEAKHNYTFAGGKHVDLKDRRRCV FT LGCIVALANEKGGRLVLGMVYAPCGCRFGFFSQDMRGAYYRGFG" FT CDS 1345616..1346266 FT /transl_table=11 FT /locus_tag="BF9343_1037" FT /old_locus_tag="BF1090" FT /product="conserved hypothetical protein" FT /note="Similar to codons 165-380 of Bifidobacterium longum FT hypothetical protein possibly related to helicases bl0609 FT SWALL:Q8G6M9 (EMBL:AE014682) (549 aa) fasta scores: E(): FT 7.6e-13, 30% id in 210 aa, and to codons 160-211 of FT Deinococcus radiodurans ATP-dependent DNA helicase FT RecG-related protein dr2199 SWALL:Q9RSC6 (EMBL:AE002053) FT (596 aa) fasta scores: E(): 5.6e-12, 31.15% id in 199 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGC2" FT /protein_id="CAH06818.1" FT /translation="MKTQYARKQENPLFQNYPDEQVLSDLDLLKDGKLNYAALILLGKS FT EAIRKYLPQNNIVVEFRMYHSMIQYTACKEFQLLLFIAIDKVWDYINQPASNPLLYYND FT GSYIFDIPSFNKEVIGEAILNVCCHRSMLIQSDVVIKQYPDSITITNAGGFPSGVDMNN FT ILTVNSVPRSKLMSEVLQKTGLVERSGQGVEKMFYNCIMEGKALPDYSGTDSY" FT misc_feature 1345727..1345750 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS <1346267..1346434 FT /transl_table=11 FT /locus_tag="BF9343_1038" FT /old_locus_tag="BF1091" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGC1" FT /protein_id="CAH06819.1" FT /translation="VSLTFNAPILDTAFVIFVRKVQDNRAAAEQLNVFELLALYKMAMR FT DYEGLDEKVL" FT CDS 1346438..1346587 FT /transl_table=11 FT /locus_tag="BF9343_1039" FT /old_locus_tag="BF1092" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGC0" FT /protein_id="CAH06820.1" FT /translation="MSEENLIVYENGSYRLSEEYRNEFAERLKGLSMTHLKLVSDCFHK FT NGYV" FT CDS complement(1346747..1347469) FT /transl_table=11 FT /locus_tag="BF9343_1040" FT /old_locus_tag="BF1093" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGB9" FT /protein_id="CAH06821.1" FT /translation="MTNETTTSILEYADTHLKFSMEDLFAYLHKKIGINKSSLAWYLFK FT LVNENKLVRTGRGMYARILKPSFAPQPAEEVKEVYDLLTTHFPFAKFCIYQGEIIAPLQ FT HHLSPNRIIYVETDRGTAETVFHLLKDDYQDVYLRPNKEMIYRYVDMDSRVFIVKNLVS FT EAPLQHISGVPIPTLEKLLVDILRDVDFFYLQGSESERIIENAFNLYAINRSRLFRYAG FT RRKVKEELSTILENLNIV" FT CDS complement(1347563..1347853) FT /transl_table=11 FT /locus_tag="BF9343_1041" FT /old_locus_tag="BF1095" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGB8" FT /protein_id="CAH06822.1" FT /translation="MDKVEHKKPNPDRKPTVQPSVFVIRMKCGLALCALSYLCRRKEKT FT RLTSKRVKPESYNRDKSVYGIKRSRYLQNNKVSNTIEWSYKMNKCKTINWL" FT CDS 1347953..1348177 FT /transl_table=11 FT /locus_tag="BF9343_1042" FT /old_locus_tag="BF1096" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGB7" FT /protein_id="CAH06823.1" FT /translation="MVEEIKQGDKVVLPGEDGFSVPMIFNNICGKNFSGEEYRNYIKYV FT VYDSMGLKPGIVSYYRDGVLYKSGTIPKL" FT CDS 1348602..1349960 FT /transl_table=11 FT /locus_tag="BF9343_1043" FT /old_locus_tag="BF1097" FT /product="putative ATP-binding protein" FT /note="Similar to Bacteroides thetaiotaomicron conserved FT hypothetical protein, putative ATPase BT2012 SWALL:AAO77119 FT (EMBL:AE016934) (429 aa) fasta scores: E(): 2.3e-32, 35.24% FT id in 437 aa, and to Fusobacterium nucleatum ATPase FN1101 FT SWALL:Q8REJ9 (EMBL:AE010615) (470 aa) fasta scores: E(): FT 3.5e-30, 32.43% id in 447 aa, and to Bacteroides FT thetaiotaomicron putative ATPase BT3083 SWALL:AAO78189 FT (EMBL:AE016938) (441 aa) fasta scores: E(): 3.5e-26, 31.75% FT id in 444 aa" FT /db_xref="GOA:Q5LGB6" FT /db_xref="UniProtKB/TrEMBL:Q5LGB6" FT /protein_id="CAH06824.1" FT /translation="MEVAMEKIYYPRTIDSYLLEWKNERAHKPLLLRGARQVGKSSAVR FT QLGKTFKYFMEVNFERDKEIISVFTGNLKPKEITSRLAAFYGIPVVPGETLLFLDEIQA FT CTPAIHSLWFFYEDYPELHVVAAGSLLEFALKKMAFFGVGRVRSLFMYPMSFDEFLAAT FT GHAGWIEAKRNASPAEPLFEALHGKLVESFRNYLMVGGMPESVQNWVETEDYLKCQQVQ FT DDIMLAYEDDFSKYEEKADPMLLRQTLRSVAQQIGGKFVYSNVQGNYRSEKIKSALELL FT KDAGLVRPAVHTAANGIPLGAEINEKFVKYIFLDSGLLLRLLGLENTGGTSEMSRLVLV FT GAASDLVNKGHITEMVAGLELLKYNTPVQRHDLYYWQNLSRGAQAEVDYVIVKDMRVVP FT LEVKAGTTGSMKSMYQFMEEKHLTYGIRTSLENFGKLEKADIIPLYALSNLYK" FT misc_feature 1348701..1348724 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT misc_feature 1348728..1348751 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS complement(1350231..1350425) FT /transl_table=11 FT /locus_tag="BF9343_1044" FT /old_locus_tag="BF1098" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGB5" FT /protein_id="CAH06825.1" FT /translation="MFADANHHRGSNVRWTHRIYPDRMWEANLYHFYNRLIQVLPRPIM FT IKDGIRQEETSAHVLYEKH" FT CDS complement(1350431..1350628) FT /transl_table=11 FT /locus_tag="BF9343_1045" FT /old_locus_tag="BF1099" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGB4" FT /protein_id="CAH06826.1" FT /translation="MSIFTNKIHLFALFLQISQTNIYSIKFIITLGNINHLKILDHNKE FT KVSIPTEEAMKMTIYVQKQK" FT CDS 1350660..1351868 FT /transl_table=11 FT /locus_tag="BF9343_1046" FT /old_locus_tag="BF1100" FT /product="putative ATP-binding protein" FT /note="Similar to Campylobacter jejuni type I FT restriction-modification system RloA SWALL:Q8G8E7 FT (EMBL:AF542648) (429 aa) fasta scores: E(): 1.9e-11, 29.33% FT id in 433 aa, and to Fusobacterium nucleatum transporter FT FN1198 SWALL:Q8REB1 (EMBL:AE010625) (420 aa) fasta scores: FT E(): 1.1e-14, 27.37% id in 431 aa, and to Lactococcus FT lactis abortive phage resistance protein AbilI SWALL:O06042 FT (EMBL:U94520) (458 aa) fasta scores: E(): 1.3e-10, 26.3% id FT in 460 aa" FT /db_xref="GOA:Q5LGB3" FT /db_xref="UniProtKB/TrEMBL:Q5LGB3" FT /protein_id="CAH06827.1" FT /translation="MIAEIRFKNMFSFRDEAILSFEADRSKDMESYHVVELGGDVRLLK FT VAVIYGANASGKSNIIKVCDFIKSFITYTPLNKAEQIQIVPFLLNKTNSRQLSEYSISF FT YLKNEEKAVRYVYSVALDRWHVAKESLIYYPSQQPATIFERNTENNVSVIKFGQKIKMS FT QSVKEEITLKCLHNMSVFAAYLQVNTHIVELEAVLQYLTNQVMPAIVPASSLSRYAEES FT IKDESAKDYILRYLQEADFNISNITSKEQETHKGSINYTMYQHKVSSDDGNNDYYEFPE FT LFESDGTIRTFGLAAQVQKILERDAFLAVDEIESSLHPKLIEYIIERFLKESEQAQLLL FT TTHYDGLLGEEDLLRKDNVWFTEKNPDGSSVLYPLTDFKGLNRISSLQKAYKFGKFGAV FT PNL" FT misc_feature 1350810..1350833 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 1351881..1352456 FT /transl_table=11 FT /locus_tag="BF9343_1047" FT /old_locus_tag="BF1101" FT /product="conserved hypothetical protein" FT /note="Similar to Corynebacterium efficiens hypothetical FT protein ce2899 SWALL:Q8FSZ3 (EMBL:AP005224) (205 aa) fasta FT scores: E(): 0.058, 23.35% id in 197 aa" FT /db_xref="UniProtKB/TrEMBL:Q5LGB2" FT /protein_id="CAH06828.1" FT /translation="MRKARKNTATRQVIHIVGEGLTELFYFSHLKKILGYRYSISPRLF FT ENNSIEKIEKKIKELLDEDVFVICVFDADVSRRSDAENKKMVSFKKKYENNPNVILCDS FT LQSIEYWFLLHFEDTCRHFQDSAATERALKQYLPTYDKTRKYLEKDKWVKEMLAGSKMD FT KACELAEKYKGRDSYSEIYKAIKKVSQN" FT CDS 1352577..1354652 FT /transl_table=11 FT /locus_tag="BF9343_1048" FT /old_locus_tag="BF1102" FT /product="conserved hypothetical protein with RecF/RecN/SMC FT N-terminal domain" FT /note="Similar to Ralstonia oxalatica hypothetical protein FT SWALL:CAD61116 (EMBL:AJ536756) (712 aa) fasta scores: E(): FT 3.7e-119, 56.96% id in 704 aa, and to Staphylococcus aureus FT hypothetical protein Sav0414 SWALL:Q932H2 (EMBL:AP003359) FT (729 aa) fasta scores: E(): 2.4e-45, 38.04% id in 728 aa, FT and to Rhizobium loti hypothetical protein Mlr8165 FT SWALL:Q983V1 (EMBL:AP003013) (608 aa) fasta scores: E(): FT 2.6e-22, 27.23% id in 650 aa" FT /db_xref="InterPro:IPR022602" FT /db_xref="UniProtKB/TrEMBL:Q5LGB1" FT /protein_id="CAH06829.1" FT /translation="MYISKVSLVNYRNFENSFFLFNKGINTIIGENASGKTNLFRAIRL FT ILDDNLLSSAYKLNENDFNRNLINWKGRWIIISLEFSEISNEEAIQALFVYGSGVIADD FT KVKKATYNLFFRPKPEIRKQLSELKEGDHDGLNFILDKITINDYETFFTGKSTVDFNDK FT NVQRELMGDFENVIFNYEIDESKFGGRIPHQLSISKEVAFTFIKALRDVVSDFQDNKKN FT PLLTLLKSKSEELNDKDSELISNKVKDLNRTIEDLNDIKEITNNISETIKEAVGTTYSP FT SSLSIKSNLPNEAEKLFHALKLFIGEPGEDYEGSIHELSLGGANLIFLTLKLLEYKYRK FT GKDRIANFLLIEEPEAHIHTHIQKALFDKIEYEDTQIIYSTHSTHISEVSNISNMNIIN FT RFKNYSEVYQPFIGLNDEEIMHIERFLDAIRCNILFAKSVILVEGDAEEILIPVMVKNT FT LGVSLDELGISLINVRSTGFENLAQLFHNQRIKKRCAIITDLDESITGKDTEASKRGLS FT RKAKLDSIKNANEWICPFYAPHTFEVEFLGNGNKDIVLSTVKDVYKDKDTIELSEQEIN FT SSDIKEYGKRILTMANYKGKGWYAILLSNYITPSVCIPKYILDAIVFAKSKFSNELIVQ FT MLEYVLDTYDEDEEIDNLKNELKSYNEGRTSFDDIKKSLEGVLNDNEPILYILNQL" FT misc_feature 1352577..1352717 FT /note="Pfam match to entry PF02463 SMC_N, RecF/RecN/SMC N FT terminal domain, score 19.1, E-value 1.6e-05" FT misc_feature 1352664..1352687 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 1354655..1356433 FT /transl_table=11 FT /locus_tag="BF9343_1049" FT /old_locus_tag="BF1103" FT /product="putative ATP-dependent DNA helicase" FT /note="Similar to Staphylococcus aureus ATP-dependent DNA FT helicase PcrA SWALL:PCRA_STAAU (SWALL:Q53727) (675 aa) FT fasta scores: E(): 1.7e-17, 25.43% id in 629 aa, and to FT Ralstonia oxalatica hypothetical protein SWALL:CAD61115 FT (EMBL:AJ536756) (599 aa) fasta scores: E(): 7.9e-127, FT 54.13% id in 580 aa, and to Staphylococcus aureus FT hypothetical protein Sav0413 SWALL:Q932H3 (EMBL:AP003359) FT (597 aa) fasta scores: E(): 6.5e-61, 34.71% id in 605 aa" FT /db_xref="GOA:Q5LGB0" FT /db_xref="InterPro:IPR000212" FT /db_xref="InterPro:IPR014016" FT /db_xref="UniProtKB/TrEMBL:Q5LGB0" FT /protein_id="CAH06830.1" FT /translation="MFVWGKNDLNPEQEKAIYNENSILLIACPGSGKTRTIIYKIAYEL FT SKLESNKQYIIAITYTNRAADEIKERIELLGVDTEQLWIGTIHSFCVEWILKPYHMYLE FT ELRFGYDIINTNDTENYLVSLCASYSTPKKKITYWDCLCYCFTSEGLKINCTKPTIKET FT VELIIYDYYQNLKEKHEIDYGLILYYSYCLLKENQSICKTLSNIFPYILIDEYQDTKEL FT QYMILGAILKTGKENKAFIVGDPNQSIYGNLGGFPMNKTQLENVTGLYYDELSLSNNYR FT SSSLLVSYFDYFKTYANKIEATGKTKDYQSVISYNKTISIEDLENEIVRIIQTNIDEYH FT IFPNEICILAPQWIHLSGLTRNLMARLPQYSFDGPGMAPFARDIDNFWYKLSRIILTDS FT TPGLYIRRLRWASEIVTNLISIGVTNVDLSAKQILYICNNILINEQDGLEYLKKFFNAF FT LDRVNIDINQNKYLKMHYDAFFDSSKKRIERLKKEGAEFITNIDTFRKVFQQKKGITIS FT TNHGVKGAEFDTVIAFGLLDGYVPHFSELNKEESAKRILYVIASRARKNLYLISEQGRK FT KYPTQILDRYKYPYNG" FT misc_feature 1354679..1356121 FT /note="Pfam match to entry PF00580 UvrD-helicase, UvrD/REP FT helicase, score 67.5, E-value 2.5e-17" FT misc_feature 1354733..1354756 FT /note="PS00017 ATP/GTP-binding site motif A (P-loop)." FT CDS 1356614..1359898 FT /transl_table=11 FT /locus_tag="BF9343_1050" FT /old_locus_tag="BF1104" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGA9" FT /protein_id="CAH06831.1" FT /translation="MEEDIQKQIIAAKEEAHDETIWGKPANDIITGIGNNSGVRPQRAI FT WEMVQNARDVSLNGKADIVFERQHDCFIFQHNGISFTNNTLEALILQTSSKVRNDSVQV FT GQYGTGFLTTHKLGLKFTLSSSVQLLENEQLFHHFSNFLIDRSSTDKKQMRDSLKKQIK FT ITEEWARNPTIVSGPSSLTTFRYIQEHEVEKMNTKEAFKASSALAPYVIALNPCVNSIS FT FVDNVEDCKELYIRKSTEIINTCDFYNVVKVTIDKCETESCDFTVLMLQSKETVEESGE FT PKVIVILPIKELESKSVAFALSKDVPNLFIYLPLLGTEQWGLNFIFHSPLFTCDKDSRD FT SLRFVGNGQNNDVDAERNKGIIQLADVIVSHYITENLSNIQDCMYLAKVAFNLHNSDEA FT LANYYKSLQSSWVKKYESFPFVITKNGNIITRQAKVFDKELFDACLENKDLLTAVYNVT FT VQIYGTDYLPLETNMLFWSETLLQWYEAESFNPHLIHLSDIVEYIDKNNITTIGEENLW FT CIDNYIANSKQIGLFTKYKLLPTKNGELRVREDLLNPIIHDESLLKILDSLLPNDVASF FT IHTRFVLFEDVKIEEYDHNKVKESMRLLVSELSDLQKGHEIYRTNILAGLDVDSNKYEQ FT NKLSDNHINALMGFYAYIVNIGGEAFQYKMIHLLADFYNIDLKSGEAYIKEIYDWRTVA FT PLLIKDALFRFTLMDSQKQAENAEWVRQMVIALYNYSDYRTYLDKYTVYPNEMDKYCYS FT KKISKSVNITNDLIALYDKIVNNENGENMCKSIKCVLLKNTYNDYFVENATIEGSSLAE FT KIMLEIKREGAYPDISANKWKQQILDIIAKQDKDVYWASIFGEIDSSKGAILLSVIQEK FT EKKDSILSLIRVSDTKKLKALAEVAEDDNLARIIELGKAALRDEMNSEADFEYKKKLGE FT YVEELIRKEIDSKLKAGSHIMEVLSQQDGQDIIILLDGTAIYYIEVKSRWSQKDSVLMS FT ALQFRTSVEEKTHYALCEVDMITYNRENVDKHEFPDVEETINRISAIMNIGVLNETLKD FT TLNQDSDQVHVGGDYKVVVPQTVWEEHGKHFNELVEEIKKIVEEKL" FT CDS 1360028..1360282 FT /pseudo FT /transl_table=11 FT /locus_tag="BF9343_1051" FT /old_locus_tag="BF1105" FT /product="conserved hypothetical protein (fragment)" FT /note="Fragment. Similar to N-terminus of Bacteroides FT thetaiotaomicron conserved hypothetical protein BT4526 FT SWALL:Q89Z51 (EMBL:AE016945) (255 aa) fasta scores: E(): FT 1.1e-28, 81.17% id in 85 aa, and to N-terminus of FT Microscilla sp. PRE1 MS152 SWALL:Q93P79 (EMBL:AF339846) FT (260 aa) fasta scores: E(): 4.6e-09, 50% id in 74 aa" FT misc_feature 1360028..1360246 FT /note="Pfam match to entry PF00149 Metallophos, FT Calcineurin-like phosphoesterase, score 21.3, E-value FT 1.7e-05" FT CDS complement(1360764..1361024) FT /transl_table=11 FT /locus_tag="BF9343_1052" FT /old_locus_tag="BF1106" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGA8" FT /protein_id="CAH06833.1" FT /translation="MAAKESEILTQKRSKIRPSSRHKSNLQIRKSISDFAASIGEIITD FT MPYLCEPEVSEQKRAIFLFSPSFEDKLRLKVLNLRFSAKNK" FT CDS 1361437..1361568 FT /transl_table=11 FT /locus_tag="BF9343_1053" FT /old_locus_tag="BF1107" FT /product="hypothetical protein" FT /note="no significant database matches" FT /db_xref="UniProtKB/TrEMBL:Q5LGA7" FT /protein_id="CAH06834.1" FT /translation="MHTQETSVLKKTYMLADVAEEMKGLSMPTFDDYGVHWRNFCHR" FT CDS 1361793..1362758 FT /transl_table=11 FT /locus_tag="BF9343_1054" FT /old_locus_tag="BF1108" FT /product="putative beta-lactamase protein" FT /note="Similar to Yersinia enterocolitica hypothetical 43.2 FT kDa protein SWALL:Q9X9H2 (EMBL:AJ132945) (379 aa) fasta FT scores: E(): 7.9e-10, 28.96% id in 359 aa, and to FT Edwardsiella tarda hypothetical protein SWALL:Q8GF13 FT (EMBL:AY078507) (357 aa) fasta scores: E(): 4.7e-05, 25.5% FT id in 349 aa" FT /db_xref="GOA:Q5LGA6" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:Q5LGA6" FT /protein_id="CAH06835.1" FT /translation="MVIEILQAGTGDSIWVSHNKKNIVIDGGKSTAAIRAKYSKMPQDE FT IIDLLVVTHIDSDHIAGIIALVKHMKEIGETHRLKQVWFNFPKKEETDEYSVGEGNELT FT SLLLEIDGLFWNNNTSELLGSTIEFGDIKLHVLAPDHDVAYENKPKEPDELGVRSDDWY FT IDLRTLIDNVDDDDIDEGGTNSQSIIILAECEGKKLLLPGDSTPKKLCDALQSYNKTNG FT TPLELDFMKLPHHGSTRNVTKNILNEVTCSNFIISTKKNNKYYLPNKETIAKLIRYRDS FT ADKAINVYFNYQESLDVLGITAEELTENNINLNVCNEFNF" FT misc_feature 1361820..1362497 FT /note="Pfam match to entry PF00753 lactamase_B, FT Metallo-beta-lactamase superfamily, score 30.4, E-value FT 3.5e-06" FT CDS 1362742..1367625 FT /transl_table=11 FT /locus_tag="BF9343_1055" FT /old_locus_tag="BF1109" FT /product="putative ATP/GTP-binding protein" FT /note="Codons 265-800 are similar to codons 180-730 of FT Anabaena sp. hypothetical protein ALL3465 SWALL:Q8YRI2 FT (EMBL:AP003593) (1119 aa) fasta scores: E(): 3.5e-08, 22.6% FT id in 575 aa, and codons