ID CP001398; SV 1; circular; genomic DNA; STD; PRO; 2045438 BP. XX AC CP001398; XX PR Project:PRJNA33671; XX DT 19-JUN-2009 (Rel. 101, Created) DT 18-OCT-2011 (Rel. 110, Last updated, Version 7) XX DE Thermococcus gammatolerans EJ3, complete genome. XX KW . XX OS Thermococcus gammatolerans EJ3 OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; OC Thermococcus. XX RN [1] RC Publication Status: Online-Only RP 1-2045438 RX DOI; 10.1186/gb-2009-10-6-r70. RX PUBMED; 19558674. RA Zivanovic Y., Armengaud J., Lagorce A., Leplat C., Guerin P., Dutertre M., RA Anthouard V., Forterre P., Wincker P., Confalonieri F.; RT "Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, RT the most radioresistant organism known amongst the Archaea"; RL Genome Biol. 10(6):R70-R70(2009). XX RN [2] RP 1-2045438 RA Zivanovic Y., Armengaud J., Lagorce A., Leplat C., Guerin P., Dutertre M., RA Anthouard V., Forterre P., Winker P., Confalonieri F.; RT ; RL Submitted (22-JAN-2009) to the INSDC. RL Institut de Genetique et Microbiologie, Universite Paris XI / UMR8621 CNRS, RL Universite Paris-Sud, Centre d'Orsay', Orsay 91405, France XX RN [3] RC Protein update by submitter RP 1-2045438 RA Zivanovic Y., Armengaud J., Lagorce A., Leplat C., Guerin P., Dutertre M., RA Anthouard V., Forterre P., Winker P., Confalonieri F.; RT ; RL Submitted (29-NOV-2010) to the INSDC. RL Institut de Genetique et Microbiologie, Universite Paris XI / UMR8621 CNRS, RL Universite Paris-Sud, Centre d'Orsay', Orsay 91405, France XX DR GR; CP001398_GR. DR SILVA-LSU; CP001398. DR SILVA-SSU; CP001398. DR StrainInfo; 304087; 1. XX CC Source DNA and shotgun clones available from Y. Zivanovic, LGA/IGM, CC Universite Paris-Sud, Orsay, France CC (yvan.zivanovic@igmors.u-psud.fr.) CC Bacteria available as above and from DSMZ under DSM 15229. XX FH Key Location/Qualifiers FH FT source 1..2045438 FT /organism="Thermococcus gammatolerans EJ3" FT /strain="EJ3; DSM 15229" FT /mol_type="genomic DNA" FT /db_xref="taxon:593117" FT /culture_collection="DSMZ:15229" FT gene join(2045139..2045438,1..327) FT /locus_tag="TGAM_2157" FT /note="tg2157" FT CDS join(2045139..2045438,1..327) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_2157" FT /product="Conserved hypothetical protein containing PHP FT domain N-terminal region" FT /db_xref="GOA:C5A2K0" FT /db_xref="InterPro:IPR003141" FT /db_xref="InterPro:IPR004013" FT /db_xref="InterPro:IPR016195" FT /db_xref="UniProtKB/TrEMBL:C5A2K0" FT /inference="protein motif:CDD:HIS2, Histidinol phosphatase FT and related hydrolases of the PHP family [Amino acid FT transport and metabolism / General function prediction FT only]" FT /inference="protein motif:COG:COG1387 Histidinol FT phosphatase and related hydrolases of the PHP family; E FT Amino acid transport and metabolism" FT /inference="protein motif:HMMPanther:PTHR11276 DNA FT POLYMERASE X FAMILY" FT /inference="protein motif:HMMPanther:PTHR11276:SF1 DNA FT POLYMERASE X" FT /inference="protein motif:HMMPfam:PF02811 PHP FT InterPro:IPR004013 PHP, C-terminal" FT /inference="protein motif:HMMSmart:SM00481 no description FT InterPro:IPR003141 Phosphoesterase PHP, N-terminal FT GO:Molecular Function:DNA binding (GO:0003677), Molecular FT Function:DNA-directed DNA polymerase activity (GO:0003887), FT Biological Process:DNA replication (GO:0006260)" FT /inference="protein motif:superfamily:SSF89550 PHP domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32502.1" FT /translation="MKTWRRYEEYLLTGEWHVHTNYTDGRNSVFEICERARELGIPLLA FT FTEHVRRKLTYDFNEFLSDIDRAREEFPELIILSGIEAKVLPDGSLDVEDDIIRQVDYP FT IFAFHSFPRDRELYVECLKKAIKNKYVNAWAHPGLFLRRTGFSLTVDELEEIFKLMKEH FT DVLLEVNRRYSLPLGSWLNLAKQMEVKTVRGGDVHGVGEFKYFWG" FT gene 334..2187 FT /locus_tag="TGAM_0001" FT /note="tg0001" FT CDS 334..2187 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0001" FT /product="putative asparagine synthase, FT glutamine-hydrolyzing" FT /EC_number="6.3.5.4" FT /db_xref="GOA:C5A2K1" FT /db_xref="InterPro:IPR001962" FT /db_xref="InterPro:IPR006426" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR017932" FT /db_xref="UniProtKB/TrEMBL:C5A2K1" FT /inference="protein motif:CDD:AsnB, Asparagine synthase FT (glutamine-hydrolyzing) [Amino acid transport and FT metabolism]" FT /inference="protein motif:CDD:AsnB, Glutamine FT amidotransferases class-II (GATase) asparagine synthase_B FT type" FT /inference="protein motif:CDD:Asn_synthase, Asparagine FT synthase" FT /inference="protein motif:CDD:Asn_Synthase_B_C, The FT C-terminal domain of Asparagine Synthase B" FT /inference="protein motif:CDD:GATase_2, Glutamine FT amidotransferases class-II" FT /inference="protein motif:CDD:GFAT, Glutamine FT amidotransferases class-II (Gn-AT)_GFAT-type" FT /inference="protein motif:CDD:GlmS, Glucosamine 6-phosphate FT synthetase, contains amidotransferase and phosphosugar FT isomerase domains [Cell envelope biogenesis, outer FT membrane]" FT /inference="protein motif:CDD:Gn_AT_II, Glutamine FT amidotransferases class-II (GATase)" FT /inference="protein motif:CDD:Gn_AT_II_novel, FT Gn_AT_II_novel" FT /inference="protein motif:CDD:GPATase_N, Glutamine FT amidotransferases class-II (GN-AT)_GPAT- type" FT /inference="protein motif:CDD:PurF, Glutamine FT phosphoribosylpyrophosphate amidotransferase [Nucleotide FT transport and metabolism]" FT /inference="protein motif:COG:COG0367 Asparagine synthase FT (glutamine-hydrolyzing); E Amino acid transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.610 no FT description" FT /inference="protein motif:Gene3D:G3D.3.60.20.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11772 ASPARAGINE FT SYNTHETASE" FT /inference="protein motif:HMMPanther:PTHR11772:SF12 FT ASPARAGINE SYNTHETASE" FT /inference="protein motif:HMMPfam:PF00310 GATase_2 FT InterPro:IPR000583 Glutamine amidotransferase, class-II FT GO:Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:HMMPfam:PF00733 Asn_synthase FT InterPro:IPR001962 Asparagine synthase GO:Molecular FT Function:asparagine synthase (glutamine-hydrolyzing) FT activity (GO:0004066), Biological Process:asparagine FT biosynthesis (GO:0006529)" FT /inference="protein motif:HMMTigr:TIGR01536 FT asn_synth_AEB:asparagine synthase (glu InterPro:IPR006426 FT Asparagine synthase, glutamine-hydrolyzing GO:Molecular FT Function:asparagine synthase (glutamine-hydrolyzing) FT activity (GO:0004066), Biological Process:asparagine FT biosynthesis (GO:0006529)" FT /inference="protein motif:superfamily:SSF52402 Adenine FT nucleotide alpha hydrolases-like" FT /inference="protein motif:superfamily:SSF56235 N-terminal FT nucleophile aminohydrolases (Ntn hydrolases)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32503.1" FT /translation="MCGINGFSWSDEGLVREMNVAIRHRGPDDEGVYVDDNVSLGHVRL FT AIIDLSPKGHQPMRYEKNGHEVWIVYNGEVYNFMELREELEKKGYVFNSNTDTEVILAA FT YLEWGFDCVKKFNGMWAFAIYDKTKKLLFLSRDRFGIKPLYYYYDGQNLIFSSEIKAIL FT KHEIKREPNDAVIFDFLYYNLLDHTEDTFFEGIKRLMPSHSAVFDIKTRELRIFKYYDL FT RKRLKKLKKAEEDPATFRKLFKKAVKRRLIADVPVGSCLSGGLDSSSIVCMMRELEKNL FT EIKTFSLIFPGFKLDESKYQESVMQKCSVKRYTTTFTAEDILRDLEDLIYTQEEPFSTL FT SIYGQYRVMKLANENGMKVLLDGQGSDEILAGYHYFFGYYYYELFRHLKWKQLIREIIY FT YRKNVGSFKALKYFIGLLLPRRIQEWILNHDTYLSREFIKRFKHRKDLRFKKKELNDAL FT VCAVMNNLPHLLRFEDKNSMRWSIETRVPFLDPELVEYALSTPSQAKIRNGITKYILRE FT SLKGIVPDIILDRRDKIGFATPDNEIANHPEIKKFIWNIINSESFKKRKYWNWKKVHKV FT YYHHSTSKLGNIFIGELIWKVVILELWLRVWIENKSARREG" FT gene 2192..3337 FT /locus_tag="TGAM_0002" FT /note="tg0002" FT CDS 2192..3337 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0002" FT /product="Glycosyltransferase, family 1" FT /db_xref="GOA:C5A2K2" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:C5A2K2" FT /inference="protein motif:CDD:Glycos_transf_1, Glycosyl FT transferases group 1" FT /inference="protein motif:CDD:RfaG, Glycosyltransferase FT [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:COG:COG0438 Glycosyltransferase; FT M Cell wall/membrane/envelope biogenesis" FT /inference="protein motif:HMMPanther:PTHR12526 FT GLYCOSYLTRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR12526:SF1 FT GLYCOSYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00534 Glycos_transf_1 FT InterPro:IPR001296 Glycosyl transferase, group 1 FT GO:Biological Process:biosynthesis (GO:0009058)" FT /inference="protein motif:superfamily:SSF53756 FT UDP-Glycosyltransferase/glycogen phosphorylase" FT /protein_id="ACS32504.1" FT /translation="MKVCMITTVHKPLDGRIFYKEARSLSKIYDVLVIAANREAGERQV FT ESVKIVTIKRPRLRKLFHFITIWRIFKKGLELDCNIYHCHEPDSLIICLLIKFIKRNNV FT KVIYDVHEHWPSEIRYGWLRVKNNKILTTIIEKLIWNIEHKAVNFADHIIVVNNHLARE FT FHMLSFKVSVIPNVPLITILKRSYSGDINKKDADLILMASKVANHYGINEILRSLYKLK FT KVYPKIKLKIIGDIKIDIKTTLDRFNMTDNVILKGFLPLENMYYEIEKGKIGLNIVKPE FT FYNIYIGLSTKLFDYMACKLPVVASNLPEIKLIIKQTKGGILVDPENINEITKAIKYLI FT ENPKDAKKMGIRNRKVIEKNINWKRSEKKLIRIYKLLEEGK" FT gene 3334..5259 FT /locus_tag="TGAM_0003" FT /note="tg0003" FT CDS 3334..5259 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0003" FT /product="Conserved hypothetical protein" FT /note="15 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2K3" FT /protein_id="ACS32505.1" FT /translation="MKNLESNKNAIIIAILLPYLLIIGSVASIVVTIYLNKLNFAIKGS FT VVVIPAVLSALMLFQGYNMKISSYNERKKSIFLTCPQRRLILLFFILFLLSILILILAP FT YRPWYYFVLVAILYIIVFLQILSKEPVSFMILLELILILIELIYGTTFKYPLYFGATDI FT PGHIFLTKVTYLSGHIVPPDLNLYYTYFPLYHIFISQGAYILGSDIKTSLFLILPIPYV FT ITVLLIYFLFNGISKNRRISLLSSFFYSNSYIITYYGTYLVTRAIAFVGFAILLYLLYR FT EISRKSYKYKLTIVFISVFILLIHNVSIIQISVLLVVMLIIEFMFGKLVDLSWKLIVII FT NTLFIGYWTFASWSFTEYLIKSHVLTLFHTSPLMRHISISNSYFFLTHIDISIATFFTL FT VGIGYMLQTEKQEHVLAFGVMSIFAVPMYVPNPLQALWQTGSLLRFDRFKLFVTPFIAF FT AIAWGFYVLNLHYSLIKEDNILKRKIFALLLVLVVMGYSFMSITMHDNANDCKDFPWKN FT PRTYFNKEELYGFSYIIENVPSNSTLYSDYYTYRFFEPMKRFSLSNFLGIPYYVSRIIP FT SIEDLPACKGYLSFRKEEFFNEGLYFGKVYNIKLYKPNKINVIKLVYLLQEKSRIYSNP FT SLDIYR" FT gene complement(5611..6897) FT /locus_tag="TGAM_0004" FT /note="tg0004" FT CDS complement(5611..6897) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0004" FT /product="Polysaccharide biosynthesis protein" FT /note="10 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2K4" FT /db_xref="InterPro:IPR002528" FT /db_xref="InterPro:IPR002797" FT /db_xref="UniProtKB/TrEMBL:C5A2K4" FT /inference="protein motif:CDD:NorM, Na+-driven multidrug FT efflux pump [Defense mechanisms]" FT /inference="protein motif:CDD:Polysacc_synt, Polysaccharide FT biosynthesis protein" FT /inference="protein motif:CDD:RfbX, Membrane protein FT involved in the export of O-antigen and teichoic acid FT [General function prediction only]" FT /inference="protein motif:COG:COG2244 Membrane protein FT involved in the export of O-antigen and teichoic acid; R FT General function prediction only" FT /inference="protein motif:HMMPanther:PTHR11206 MULTIDRUG FT RESISTANCE PUMP-RELATED" FT /inference="protein motif:HMMPfam:PF01943 Polysacc_synt FT InterPro:IPR002797 Polysaccharide biosynthesis protein FT GO:Biological Process:polysaccharide biosynthesis FT (GO:0000271), Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32506.1" FT /translation="MSLKKRLIINASWLLAGQTLHKLISYIIILVLSRTLGDVGLGQYS FT FVVSFTSFVSYLSDFGINYYIMREVARDKGKKDLVSYALGFKIILAVLDWLLIVFLALH FT LNKSAVVKTSIILYGSGAVVGTIGLLFTSVIFAHEVTKYETYSMVTERVMTLLLGGAVL FT LITKSLFAFFVVLTADTFLLNFLRMYFGSRYVSPKPMFDLDKWKEILSKSYVFWFIYLF FT SFIYFNTDIIMLGLMKPDEVVGWYKAGYFFIQAAMLVPSVVVNTTMPSISRLWVENPKT FT LKILFKRAFQVLLVIGVAGAVGAFLFAPLLVHMFFGSEFVNSVEVLKILGWTLPAIFLN FT SLYGSFLNGIGREKTYTKIVGGTALLNVLLNYILIHLMSYKGAAIATLATNWISTSVLS FT IKVYSILRDMYEERGRYEKTKGIPEDPKT" FT gene complement(7224..7457) FT /locus_tag="TGAM_0005" FT /note="tg0005" FT CDS complement(7224..7457) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0005" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2K5" FT /protein_id="ACS32507.1" FT /translation="MRDYLIIFLGLWIVLSAVLSPSTEVFLTVVLIGLLITLEIGEFYL FT SEETKDGLKYSSYFLLLVFAVIVAMKVYEILK" FT gene complement(7454..8194) FT /locus_tag="TGAM_0006" FT /note="tg0006" FT CDS complement(7454..8194) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0006" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2K6" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32508.1" FT /translation="MKILLSFPHVQTLVEMGKVSGIFLTALGTVLWYAGGSSGNQAMVN FT LGIGSIILGIVAFSLPGWKCLPPEAGEVLGGGHCALFSNLASDLGLRGKAFVLPPYENL FT PRGGIFIPVSPRGSPNLGRLFEGRVLYSEPEPGLLLSPVPGWRFIDGLKLLGSGVGYAA FT SAVSGVLDRFGLPGAKVFEEDDTVEVYVKASCKEFPYADPVVSAVLVALASGAGEVLVV FT EEVGEVKGHLKLLLRKAGGVEKWL" FT gene 8215..9972 FT /locus_tag="TGAM_0007" FT /note="tg0007" FT CDS 8215..9972 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0007" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A2K7" FT /inference="protein motif:Gene3D:G3D.2.60.40.920 no FT description" FT /inference="protein motif:superfamily:SSF48726 FT Immunoglobulin" FT /inference="protein motif:superfamily:SSF49373 FT Invasin/intimin cell-adhesion fragments InterPro:IPR008964 FT Invasin/intimin cell-adhesion" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32509.1" FT /translation="MRLEKLVKLLTIITILLLMLPPAGARGVEKPAPHDEFLYEYFSHT FT LEKFAYSLKYAYEGNDYGLTLAENTHNDLLRIMRESRIYREKRIKARVFDILPPFYNFS FT VDLITLDKLLFKFQEDNGSIALATGIVNTIERMKIYLGEIKAIELYNETKILRFDTSRV FT ERYLNEINETAEKTLNSQSKNHELTLYTTNRNPIVNQSVTFFGTAPSNGSVRIVIREES FT GLERGIVVPVERHFFTMQYRFTRPGEYLVRAVQGNLSTEWMKIDVGKIPTYFLVLSPTS FT AIVNTTLMVRVSLVDYYSNPLPGREVTVNGTVFITDTNGTVTFDLWSPKEASFNLALEF FT KGDEFHEGITKVVTLEFTRIPTAITITGPGTVEEGKAFEIKGSITPAINSTVEIYVNDR FT PYAVVNSTNGIFSLNITHETAETLKVYAVFNGTELYLPSKSNVLLVSVVPSESNPLRYV FT AVLLIVISLVAYTQRDRLGRRAERQEGTVEKEETGGEEAVWIEIPNDVGEAYSLIRDAL FT FREMGVPKNLTPREVLERLKGWKGHKDLKTVTLIHEKVVYGGEKPGKEEIQAFKRAAEA FT VIKALGGTA" FT gene 9969..10958 FT /locus_tag="TGAM_0008" FT /note="tg0008" FT CDS 9969..10958 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0008" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2K8" FT /protein_id="ACS32510.1" FT /translation="MRKMVKYSILVIGTFILFTMPLTVPYFKSSSQYSMFNPDWDGISK FT FAALIYKEKKEPIPLLGPIDSYELSGGTLMIVGPDVDYTPEEIEAIKEFVEEGNTLFIA FT DDFGTANEVLRGFNIPMGLSKYPLRDFFYEVDDRFLITAKITDPVLGRGVDKVITNDPS FT AIIVTRKGEVYTSGTAMINFHRRTYPILAMTRYGKGRIIVLADPDILSNNLFEENYPFL FT RNLINYIPGPVYIDESHHSDFNLYTQGTITIRRVLPKESAQKLLLLLGFLIIAYEFGAL FT GYLGRPLRMVIEKIIGRRGSIEEVALELAEERGWDKKEVLEMLNSLGD" FT gene 10951..11880 FT /gene="moxR-1" FT /locus_tag="TGAM_0009" FT /note="tg0009" FT CDS 10951..11880 FT /codon_start=1 FT /transl_table=11 FT /gene="moxR-1" FT /locus_tag="TGAM_0009" FT /product="moxR-type AAA ATPase, putative chaperone protein FT (moxR)" FT /db_xref="GOA:C5A2K9" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011703" FT /db_xref="InterPro:IPR016366" FT /db_xref="UniProtKB/TrEMBL:C5A2K9" FT /inference="protein motif:CDD:ChlI, Mg-chelatase subunit FT ChlI [Coenzyme metabolism]" FT /inference="protein motif:CDD:COG0714, MoxR-like ATPases FT [General function prediction only]" FT /inference="protein motif:CDD:Mg_chelatase, Magnesium FT chelatase, subunit ChlI" FT /inference="protein motif:COG:COG0714 MoxR-like ATPases; R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.1.10.8.80 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR10046 ATP FT DEPENDENT LON PROTEASE FAMILY MEMBER" FT /inference="protein motif:HMMPanther:PTHR10046:SF2 FT ATP-DEPENDENT PROTEASE LA" FT /inference="protein motif:HMMPfam:PF07726 AAA_3 FT InterPro:IPR011703 ATPase associated with various cellular FT activities, AAA-3 GO:Molecular Function:ATP binding FT (GO:0005524), Molecular Function:ATPase activity FT (GO:0016887)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32511.1" FT /translation="MIEMIIEKIRTEVKKAIVGMDDVVELMTIALLSNGHILLEGVPGL FT AKTTLSKNFAKSLNLAFTRVQMTPDLLPADIIGHSFYDMRTGEFKIRKGPIFTNILLVD FT EINRASPKTQSALLEAMEEKQVTIEGQTFRLPRPFLVIATRNPVEIEGVYDIPTAQADR FT FMMEIKVSYLSENHEKEMLRRKNLGLFDEAKPVVSKGELEKAAKEVRGVKVSDEIIDYI FT YSILRATREDERALLGASPRAGEHLLLAAKAKAYLENRSYVIPDDVKSLAVPVLSHRIL FT IKPEYEMEGLTGEEVVREALNRVEVPTG" FT gene 11877..13157 FT /locus_tag="TGAM_0010" FT /note="tg0010" FT CDS 11877..13157 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0010" FT /product="MoxR associated protein, containing DUF58 domain" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="InterPro:IPR002881" FT /db_xref="UniProtKB/TrEMBL:C5A2L0" FT /inference="protein motif:CDD:COG1721, Uncharacterized FT conserved protein (some members contain a von Willebrand FT factor type A (vWA) domain) [General function prediction FT only]" FT /inference="protein motif:CDD:DUF58, Protein of unknown FT function DUF58" FT /inference="protein motif:COG:COG1721 Uncharacterized FT conserved protein (some members contain a von Willebrand FT factor type A (vWA) domain); R General function prediction FT only" FT /inference="protein motif:Gene3D:G3D.3.40.50.410 no FT description" FT /inference="protein motif:HMMPfam:PF01882 DUF58 FT InterPro:IPR002881 Protein of unknown function DUF58" FT /protein_id="ACS32512.1" FT /translation="MKTADFLLGLAGVLLAGAILLQSPSLAGIASAIMAYYASVRLSFK FT GGGKAVLTLPERTTELEWTKIPVEVESRFEIPGRIVVNVRNPDVEVEEFSMEIKPGENS FT KTALRIKPLKKGMLDVEIEAFFMDKSGLFMKKIDVEGIKPIAVLPSPRKVAEARRVREK FT PNAFAELLHALGIGSESLDFEELREFLPGDDVKRIDWKATSRVLRPIVRVFKRETLADV FT YVLVNVDESFRREIRNVKTDYLTLITAQLITYFARHGHRVGIVAYSDHEISKVIRNVYE FT PRKALSELDLKPKPGKPQLRPSYLRGNNIIRRILRLKARSPLSGIEKAASAVPESSYVV FT ILDDIGLHPWAIMSAVNMLEEKGSKVAVLYPNPIRFIPKESVRPENLESLYLAYRERKE FT LLRKIRSRVKVVELSPRDLLPRVVKAL" FT gene 13154..13696 FT /locus_tag="TGAM_0011" FT /note="tg0011" FT CDS 13154..13696 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0011" FT /product="Conserved hypothetical protein" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2L1" FT /protein_id="ACS32513.1" FT /translation="MIGLIASVVSAAVLKSWIPLTAALAYILSIKGRKTALLGFSLYLT FT SIIADPGFDSVYTIKGQKEFILLGMTTLLVLNDVLQRGILTENKWDIPLSGVLAISAVN FT DYTLFAALISTAVYKLYESFGKAALYFLTWLSTMGIVLLALKGKLPGIAAETFVIGALG FT LLAVVVGGIRDINHAEV" FT gene 13693..14532 FT /locus_tag="TGAM_0012" FT /note="tg0012" FT CDS 13693..14532 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0012" FT /product="Hypothetical protein" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR019127" FT /db_xref="UniProtKB/TrEMBL:C5A2L2" FT /protein_id="ACS32514.1" FT /translation="MKLKPVKIRTFEGLVVIITTAVFLLYRTPFTLYAGLLYALTLYAS FT ERKALPRDPGLDPQTILGILLVLLSPVFLVVKLGKYPSPSTFVMLFLLGLQLVFFRIKG FT LEMPLAVAAGGAAVALSSKTGLIRKVIDITSGLFVDVTSILVKGLVELSGIPIKINKNI FT AVVGKAIVIIGSGCSGFDAFVIYILASLLLIYMRKSSRREAALLLLGAVGIIPLNALRI FT FILLVIGYYTGVSFLELFHSHLGDLMFVAYVFLYWWWVTGRKKRTSVALESKGQNDQ" FT gene complement(14494..18240) FT /locus_tag="TGAM_0013" FT /note="tg0013" FT CDS complement(14494..18240) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0013" FT /product="Glycoside hydrolase, family 57, putative" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A2L3" FT /db_xref="InterPro:IPR004300" FT /db_xref="InterPro:IPR005085" FT /db_xref="InterPro:IPR008960" FT /db_xref="InterPro:IPR011330" FT /db_xref="UniProtKB/TrEMBL:C5A2L3" FT /inference="protein motif:CDD:Glyco_hydro_57, Glycosyl FT hydrolase family 57" FT /inference="protein motif:HMMPfam:PF03065 Glyco_hydro_57 FT InterPro:IPR004300 Glycoside hydrolase, family 57 FT GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:carbohydrate metabolism (GO:0005975)" FT /inference="protein motif:superfamily:SSF88713 Glycoside FT hydrolase/deacetylase" FT /protein_id="ACS32515.1" FT /translation="MLASRSKPFEDAENISLKVMTMRALAGVVAAMVILSLLPQNIIPG FT VSAYPSADGSPFDWVYDNVKALDGHDDLWHWYNDGDDYARDLIAFYYSENPDTVTMRID FT LMELDVGEESNANWYILMDFAAGGQNALPDGLTDANGNTLSTGMAWDIAIAVYDSSNYN FT VYFPDWSVHNDVVKAVTLNAEYDFIDVELYKDKIPNFPSGGQVHFQVLSAKDFSSPYRV FT TDSMPDDIQYYFTSDDRVGTAKVVFVHHANQHIAYSESDVCGGEGTGYDDVIRTHLQYR FT VPLNLHLSGVLLENLIWNDYTCGADNFIQMIRYGVNSGLIGILTSAYGQQIMPFFPQDL FT NVKSLGMENALIWELFSYTPKVAWVPERVWETKLSDGDPYNGVKSDPWDYFAATNPANG FT LPYAEAVVLDANTHGTGKDANGNPINPYKIYELPNGKLKIFFIDDWLKDTIYSSNDWDS FT DSWTSIKKHWLDFALSPDQEQIDVYADDLEKAAGVAGWPTNPQDYFYAVRYVAAHPWIR FT AVKLDDVLSWSSGEGGRFWGDGGDYWPVAGTYREIGGTNGYGGTGDVNGDGTPDRNAWY FT KDWAINYYPYNCPKSAGTLWWEVYQELENLKNVGVDNNLVDLAWTTLMANLYETGWHDG FT LGGSLSGWEKEISSHLRHALPYAYGAWWLSNTNKPLLAYWKNVDEDNDNEIVVQNDRLY FT AVLDPIGGRVGWLFDSNGHVVIGNSMALWSGTEGDYNDGNHVWGLSDAYDGGTYEHSYY FT QLEILEDGTNGRILVRTKSPGGFVKYIELRKGWSYLKVTYRDVSRRIYVKTGFSPGLSD FT LLRNGKKNIERVWLYDGKVAGYYNRETDTLGAYVLPGPVSFNRGEDWRTLTVADEIKLE FT SDGTFYIYAGPWNASVFGELLSEPLRGSVSFSPERPSAGDTVTIYYNASGGPLEGATSL FT TLHWGHDGWKDVTDTPMQYSNGVWKVAIETQGSWGSLDFVFTNGSVWDNDGWRDYHIYL FT SPPSVPASVSDLLTGDECSWGSYLPAPNSGEVKDGEYVWHDANGDVHSTKNYPHPEDNY FT DIESVRVRADRDYVYFSIRLSDLASIGEFGAPLIAIPISVGTGTNHTIPYDGSLSYSPG FT WDYWVVVDLSKAGFPDTEILGSPAVEVYDSSFSKLAGDYYAIASKTNSVIQVAIPRELL FT GNPSSLGFNVLVFLGDSRGGALDPGSPKVVDLMSPSSTDGELSDGSIDYAADVDLTAVL FT FFGYSPLIVGALLVVLAFAFKRH" FT gene complement(18262..19233) FT /locus_tag="TGAM_0014" FT /note="tg0014" FT CDS complement(18262..19233) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0014" FT /product="Hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2L4" FT /protein_id="ACS32516.1" FT /translation="MSVQILWRISPGGIQMKKAGLFLAMLLMLSVAGFVSAHQITVDGS FT PTDWQADTSTQNVNTWHLYSNAGEWVWKDATGDVRTDIQDCNPCDPGDTDITEIRITSD FT QDYVYILVKFRDINKVGGYLEDETEPFGNSKRGLGLIITIDTDQQSNSGQTWLPKYSNT FT QVNSNAAWERAVFITTANDGWNYNKAHIYADYNEFDIYDPSWNDVGSHNSEAVIDADND FT VIEMKLYKGDLGIQDLSSSTIRITVSTIVHDWSTGNAVIVGDQSNSNVVDVMTTESSTW FT DEVSDGYIDYYTDIDIFQVPFFSNLAVVLAFVLGVVLLFRRL" FT gene 19317..20318 FT /locus_tag="TGAM_0015" FT /note="tg0015" FT CDS 19317..20318 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0015" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF1616 family; 5 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR011674" FT /db_xref="InterPro:IPR014495" FT /db_xref="UniProtKB/TrEMBL:C5A2L5" FT /inference="protein motif:CDD:COG4743, Predicted membrane FT protein [Function unknown]" FT /inference="protein motif:COG:COG4743 Predicted membrane FT protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF07760 DUF1616 FT InterPro:IPR011674 Protein of unknown function DUF1616" FT /protein_id="ACS32517.1" FT /translation="MEEPKGIWKYWDLLIIIGLSLILDVLIFYAPNSLARKGLGLAFVL FT FFPGYVFITALFPERKELDNLERLALSFGLSIAIVPLIGLGLNYTPWGIRLIPILVSLT FT IFNVALALIAIYRRSKAFEPWIPWITLERIKGELEWESSSRLDKALTGILIIAIITSIG FT TLTYVITHPKPGEAFTEFYILGPGGKASDYPTELKVGQEGKVIIGIVNHEGRNVTYYVQ FT IWLVNLTWENQTNTTTIYEMYPLPGWFNVTLPNVPINIEGNWTPQFETNYTFSIKRPGD FT WQVWFLLFKDNQPKLPPAPPDGNYAETETRNLILKAINGTIQSLKLNVHVKE" FT gene complement(20295..21473) FT /locus_tag="TGAM_0016" FT /note="tg0016" FT CDS complement(20295..21473) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0016" FT /product="Glycosyltransferase, family 1" FT /db_xref="GOA:C5A2L6" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:C5A2L6" FT /inference="protein motif:CDD:Glycos_transf_1, Glycosyl FT transferases group 1" FT /inference="protein motif:CDD:RfaG, Glycosyltransferase FT [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:COG:COG0438 Glycosyltransferase; FT M Cell wall/membrane/envelope biogenesis" FT /inference="protein motif:Gene3D:G3D.3.40.50.2000 no FT description" FT /inference="protein motif:HMMPanther:PTHR12526 FT GLYCOSYLTRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR12526:SF1 FT GLYCOSYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00534 Glycos_transf_1 FT InterPro:IPR001296 Glycosyl transferase, group 1 FT GO:Biological Process:biosynthesis (GO:0009058)" FT /inference="protein motif:superfamily:SSF53756 FT UDP-Glycosyltransferase/glycogen phosphorylase" FT /protein_id="ACS32518.1" FT /translation="MGVTRRYRGESEKLLVPLLNLFTMETLKIAFVYDVVYPWVKGGVE FT RRIYELAKRLARDHEVHVYGYKHWEGKNEIERDGIHYHGLAPAPKRLYLLGKRNPLPML FT RLASRLRRRIGEFRWYDIVDVQNLFYPGALALKSLPSTVITWHEFWGPYWWRYLGPGGL FT PGWLSERALFTAEHHISVSWKTKHDLLRAGLRKPVPVVPNGVDVEFIQAIPPDELESDV FT IFVGRLISEKGVDFLLKALVKVKEELPDVRAVIVGGGPERKRLERMAKGLGLEKNVLFT FT GFLPYKRVIALMKASKVFVLPSLREGFGMVALEAMACGLPVVTLNAPMNAARFLVEDGK FT NGFVVDESQLSDTLASLLFDKAFLKLIGRVSREISAEYDWDAVVRLLLDVYV" FT gene complement(21439..22434) FT /locus_tag="TGAM_0017" FT /note="tg0017" FT CDS complement(21439..22434) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0017" FT /product="Sugar-phosphate nucleotydyltransferase" FT /EC_number="2.7.7.-" FT /db_xref="GOA:C5A2L7" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:C5A2L7" FT /inference="protein motif:CDD:GalU, UDP-glucose FT pyrophosphorylase [Cell envelope biogenesis, outer FT membrane]" FT /inference="protein motif:CDD:GCD1, FT Nucleoside-diphosphate-sugar pyrophosphorylase involved in FT lipopolysaccharide biosynthesis/translation initiation FT factor 2B, gamma/epsilon subunits FT (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, FT outer membrane / Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:GlgC, ADP-glucose FT pyrophosphorylase [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:GlmU, FT N-acetylglucosamine-1-phosphate uridyltransferase (contains FT nucleotidyltransferase and I-patch acetyltransferase FT domains) [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:NTP_transferase, Nucleotidyl FT transferase" FT /inference="protein motif:CDD:RfbA, dTDP-glucose FT pyrophosphorylase [Cell envelope biogenesis, outer FT membrane]" FT /inference="protein motif:COG:COG1208 FT Nucleoside-diphosphate-sugar pyrophosphorylase involved in FT lipopolysaccharide biosynthesis/translation initiation FT factor 2B, gamma/epsilon subunits FT (eIF-2Bgamma/eIF-2Bepsilon); M Cell wall/membrane/envelope FT biogenesis" FT /inference="protein motif:Gene3D:G3D.3.90.550.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR19136 FT SUGAR-PHOSPHATE NUCLEOTIDYL TRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR19136:SF26 FT GLUCOSE-1 PHOSPHATE TRANSFERASE" FT /inference="protein motif:HMMPfam:PF00483 NTP_transferase FT InterPro:IPR005835 Nucleotidyl transferase GO:Biological FT Process:biosynthesis (GO:0009058), Molecular FT Function:nucleotidyltransferase activity (GO:0016779)" FT /inference="protein motif:superfamily:SSF53448 FT Nucleotide-diphospho-sugar transferases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32519.1" FT /translation="MKVLIMAGGYATRLWPITKDNPKALLPVGERRIIDYILEKALKLE FT LPVYISTNRFFESHFRPVAEKYGVELIVEDTLHEEEKLGTIGAMKKAVEELGLDDYLVI FT AGDNLFSFSLQDFLARYSGETLIAVYDVGDLELAKRYGVVVLEGDRVVAFEEKPAQPRS FT TLISTGVYVFPERVMGLLDDYLSNGNRDSPGYFVQWLLERGEPIKAYRFSEYWYDIGSA FT DSYLEALKTLLRESHIEEIQISPYSKIIPPVVIKRGAKILGRSIIGPFAYIGEECVIEN FT SDVSDSIIFRKTIIRNSTIWRSIIDEKCEIRNLELRKSLVGGHAKIQRGE" FT gene 22526..23476 FT /gene="galE-1" FT /locus_tag="TGAM_0018" FT /note="tg0018" FT CDS 22526..23476 FT /codon_start=1 FT /transl_table=11 FT /gene="galE-1" FT /locus_tag="TGAM_0018" FT /product="UDP-glucose 4-epimerase (galE)" FT /EC_number="5.1.3.2" FT /db_xref="GOA:C5A2L8" FT /db_xref="InterPro:IPR001509" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A2L8" FT /inference="protein motif:CDD:3Beta_HSD, 3-beta FT hydroxysteroid dehydrogenase/isomerase family" FT /inference="protein motif:CDD:COG0702, Predicted FT nucleoside-diphosphate-sugar epimerases [Cell envelope FT biogenesis, outer membrane / Carbohydrate transport and FT metabolism]" FT /inference="protein motif:CDD:COG1086, Predicted FT nucleoside-diphosphate sugar epimerases [Cell envelope FT biogenesis, outer membrane / Carbohydrate transport and FT metabolism]" FT /inference="protein motif:CDD:COG1090, Predicted FT nucleoside-diphosphate sugar epimerase [General function FT prediction only]" FT /inference="protein motif:CDD:Epimerase, NAD dependent FT epimerase/dehydratase family" FT /inference="protein motif:CDD:GalE, UDP-glucose 4-epimerase FT [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:Gmd, GDP-D-mannose FT dehydratase [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:RfbB, dTDP-D-glucose FT 4,6-dehydratase [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:RfbD, dTDP-4-dehydrorhamnose FT reductase [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:WcaG, FT Nucleoside-diphosphate-sugar epimerases [Cell envelope FT biogenesis, outer membrane / Carbohydrate transport and FT metabolism]" FT /inference="protein motif:COG:COG0451 FT Nucleoside-diphosphate-sugar epimerases; M Cell FT wall/membrane/envelope biogenesis" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPanther:PTHR10366 FT UDP-GLUCURONATE 5-EPIMERASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10366:SF64 FT UDP-GLUCOSE 4-EPIMERASE-RELATED" FT /inference="protein motif:HMMPfam:PF01370 Epimerase FT InterPro:IPR001509 NAD-dependent epimerase/dehydratase FT GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:nucleotide-sugar metabolism FT (GO:0009225), Molecular Function:NAD binding (GO:0051287)" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32520.1" FT /translation="MKVLVTGGAGFIGSHLVDRLMELGHEVRVLDDLSAGTLDNLRRWV FT DHERFEFIKGDMRDPKIVEEAVKDVEVVFHLAANPEVRIGSQSPELLYETNVLITYNLL FT NAMRGSNVEYLVFTSSSTVYGDADVIPTPEDYGPLEPISVYGGAKLAAEALISGYAHTF FT EFRALIFRLANIIGERSNHGVIYDFINKLRKNPEELEILGDGTQRKSYLHVSDTVEGML FT HIFEHFKRSEKTVDFYNLGNDDWITVKEIAEIVSEEMSLRPRFVFTGGVDGGRGWKGDV FT KFMRLSIEKAKATGWRPRLNSYDAVRRTVRELLKS" FT gene 23577..24725 FT /locus_tag="TGAM_0019" FT /note="tg0019" FT CDS 23577..24725 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0019" FT /product="Peptidase M50, mammalian sterol-regulatory FT element binding protein-like protein" FT /note="Contains PDZ/DHR/GLGF domain and SREBP signature; 7 FT probable transmembrane helices predicted by modhmm" FT /db_xref="GOA:C5A2L9" FT /db_xref="InterPro:IPR001193" FT /db_xref="InterPro:IPR001478" FT /db_xref="InterPro:IPR008915" FT /db_xref="UniProtKB/TrEMBL:C5A2L9" FT /inference="protein motif:CDD:COG0750, Predicted FT membrane-associated Zn-dependent proteases 1 [Cell envelope FT biogenesis, outer membrane]" FT /inference="protein motif:CDD:PDZ_archaeal_metalloprotease, FT PDZ domain of archaeal zinc metalloprotases, presumably FT membrane-associated or integral membrane proteases, which FT may be involved in signalling and regulatory mechanisms" FT /inference="protein motif:CDD:PDZ_metalloprotease, PDZ FT domain of bacterial and plant zinc metalloprotases, FT presumably membrane-associated or integral membrane FT proteases, which may be involved in signalling and FT regulatory mechanisms" FT /inference="protein motif:COG:COG0750 Predicted FT membrane-associated Zn-dependent proteases 1; M Cell FT wall/membrane/envelope biogenesis" FT /inference="protein motif:FPrintScan:PR01000 SREBPS2PTASE FT InterPro:IPR001193 Peptidase M50, mammalian FT sterol-regulatory element binding protein GO:Molecular FT Function:metalloendopeptidase activity (GO:0004222), FT Biological Process:proteolysis (GO:0006508), Cellular FT Component:membrane (GO:0016020)" FT /inference="protein motif:Gene3D:G3D.2.30.42.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR18868 SERINE FT PROTEASE" FT /inference="protein motif:HMMPanther:PTHR18868:SF14 SERINE FT PROTEASE" FT /inference="protein motif:HMMPfam:PF00595 PDZ FT InterPro:IPR001478 PDZ/DHR/GLGF GO:Molecular FT Function:protein binding (GO:0005515)" FT /inference="protein motif:HMMPfam:PF02163 Peptidase_M50 FT InterPro:IPR008915 Peptidase M50 GO:Molecular FT Function:metalloendopeptidase activity (GO:0004222), FT Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:HMMSmart:SM00228 no description FT InterPro:IPR001478 PDZ/DHR/GLGF GO:Molecular FT Function:protein binding (GO:0005515)" FT /inference="protein motif:ProfileScan:PS50106 PDZ FT InterPro:IPR001478 PDZ/DHR/GLGF GO:Molecular FT Function:protein binding (GO:0005515)" FT /inference="protein motif:superfamily:SSF50156 PDZ FT domain-like InterPro:IPR001478 PDZ/DHR/GLGF GO:Molecular FT Function:protein binding (GO:0005515)" FT /inference="protein motif:CDD:PDZ_serine_protease, PDZ FT domain of trypsin-like serine proteases, such as DegP/HtrA, FT which are oligomeric proteins involved in heat-shock FT response, chaperone function, and apoptosis" FT /protein_id="ACS32521.1" FT /translation="MWTMVSTLIIVIAGIMAFWVLVYAAFGRREEENEEEGIAVDLFVI FT MWRTKRVLGFIDRLASRGRKFWKVYGDVGIALGFLGMAFVFYALLKTAIATIQTHGKQA FT GVQLVIPGLTIPLWYGLVGLAVVMVVHELSHGVVARADKLPLKSVGLVLFFVIPGAFVE FT PDEEELKRAPLRTRLRVYGAGSLANLLVALLALLIMNLALTPLLQPAGIEVAGVISDSP FT ASGVLERGDVIVAINGTAIKTLEDFENFINTTRPNQTIAITVLRNGEEKTVKLKLGARE FT DNPERPFIGIYLGQHYRSRIGHENIVFPLFFSFYWIYFLNFGIGLMNLFPLVPLDGGRM FT LDDLLKEYIPEGLAKPLRYAVIAIGLTLLGLNLWPALLHLAR" FT gene 24834..25811 FT /locus_tag="TGAM_0020" FT /note="tg0020" FT CDS 24834..25811 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0020" FT /product="PP-loop ATPase, YdaO-type" FT /db_xref="GOA:C5A2M0" FT /db_xref="InterPro:IPR000541" FT /db_xref="InterPro:IPR011063" FT /db_xref="InterPro:IPR012089" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:C5A2M0" FT /inference="protein motif:CDD:Alpha_ANH_like_II, This is a FT subfamily of Adenine nucleotide alpha hydrolases FT superfamily" FT /inference="protein motif:CDD:ATP_bind_3, PP-loop family" FT /inference="protein motif:CDD:MesJ, Predicted ATPase of the FT PP-loop superfamily implicated in cell cycle control [Cell FT division and chromosome partitioning]" FT /inference="protein motif:CDD:PP-ATPase, N-terminal domain FT of predicted ATPase of the PP-loop faimly implicated in FT cell cycle control [Cell division and chromosome FT partitioning]" FT /inference="protein motif:COG:COG0037 Predicted ATPase of FT the PP-loop superfamily implicated in cell cycle control; D FT Cell cycle control, cell division, chromosome partitioning" FT /inference="protein motif:Gene3D:G3D.3.40.50.610 no FT description" FT /inference="protein motif:HMMPanther:PTHR11807 N-TYPE ATP FT PYROPHOSPHATASE - RELATED" FT /inference="protein motif:HMMPfam:PF01171 ATP_bind_3 FT InterPro:IPR011063 PP-loop" FT /inference="protein motif:HMMPIR:PIRSF004976 Predicted FT PP-loop ATPase, YdaO type InterPro:IPR012089 PP-loop FT ATPase, YdaO-related" FT /inference="protein motif:HMMTigr:TIGR00269 FT TIGR00269:conserved hypothetical protein T FT InterPro:IPR000541 Protein of unknown function UPF0021 FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:ScanRegExp:PS00589 PTS_HPR_SER FT InterPro:IPR002114 Phosphotransferase system, HPr serine FT phosphorylation site GO:Molecular Function:sugar porter FT activity (GO:0005351), Biological FT Process:phosphoenolpyruvate-dependent sugar FT phosphotransferase system (GO:0009401)" FT /inference="protein motif:superfamily:SSF52402 Adenine FT nucleotide alpha hydrolases-like" FT /inference="protein motif:superfamily:SSF57716 FT Glucocorticoid receptor-like (DNA-binding domain)" FT /protein_id="ACS32522.1" FT /translation="MPAKCSKCGRPAVYHARYTGRYYCHKHFNEMVEKKFKETVKKYRL FT IEKGERIAVGVSGGKDSVVLMHLLAKLREKFPFELVAITIDEGIAGYRPKSVEIAKRNA FT RKLGIEHRIYSFKEYIGFTLDETVGIMGSFERGERVGACSYCGVWRRWLLNYAAKDVGA FT DKLAVGHNLDDEVQMFIMNILRGDIARLGRTGPYYEEIHPELVPRIKPLREIPEKEIVL FT YAVLNNIEVDLSECPYAVEAFRAEIRDWLNEMEERHPGTKYQILRSYDKLFPLIAKTYT FT KKTSELNRCKICGQPTTGEICKACQFRLQVERKAREKGLTFRVE" FT gene 25878..26081 FT /locus_tag="TGAM_0021" FT /note="tg0021" FT CDS 25878..26081 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0021" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A2M1" FT /protein_id="ACS32523.1" FT /translation="MFPLIIETAIPFEELEEIRRKSGAEVKLTLLGTIERNGIVLNRVL FT VEGHPEEIERFMGKLKLARAGG" FT gene 26144..26713 FT /locus_tag="TGAM_0022" FT /note="tg0022" FT CDS 26144..26713 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0022" FT /product="Hypothetical protein" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2M2" FT /protein_id="ACS32524.1" FT /translation="MEELSEALKAIERELNFAKKAYRASVFLYWAWAMPGVYLLAQILL FT KYAGIGEGSAIQWLSLAAVVGFIVEERKTFRRVIQLEEALEHIEETPRGYVLAQVIVWP FT LSALIASMYTENDGLWMLVFIGLGLLLLTGVEFIFTGKRDWKTALAGVILLSSTALCTG FT FGYAVMAVAFAFSLTAYLHLKGAMRE" FT gene 26715..27011 FT /locus_tag="TGAM_0023" FT /note="tg0023" FT CDS 26715..27011 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0023" FT /product="Transcription regulator, ArsR family" FT /db_xref="GOA:C5A2M3" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A2M3" FT /inference="protein motif:COG:COG1846 Transcriptional FT regulators; K Transcription" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMPfam:PF01022 HTH_5 FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:HMMSmart:SM00418 no description FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /protein_id="ACS32525.1" FT /translation="MLEELARLSRSPLGNPTRLAIALYLLSRERATFVSLRKALKLTAG FT NLEFHLKTLEEAGIVRTYYGFGRRPRKFVEITEEGIEELREVLKILREVTGDD" FT gene 27004..27627 FT /locus_tag="TGAM_0024" FT /note="tg0024" FT CDS 27004..27627 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0024" FT /product="Zinc-dependant protease, putative" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2M4" FT /db_xref="InterPro:IPR003675" FT /db_xref="UniProtKB/TrEMBL:C5A2M4" FT /inference="protein motif:COG:COG1266 Predicted FT metal-dependent membrane protease; R General function FT prediction only" FT /inference="protein motif:HMMPfam:PF02517 Abi FT InterPro:IPR003675 Abortive infection protein" FT /protein_id="ACS32526.1" FT /translation="MIEFAVALTLWLLILSASGTVATLVAGRWAKKAGFAMQLTMFFLS FT LAVIELMGGPQRFGLVPDFRYVPQAVVLGFGASLIINLLEGNPSVPMEEFMPEGVERLV FT LLLILAPLGEEVFTRGLIEGYILGYGHFWSAILFSALLFALPHWMAYEGSKKRKIVAVG FT GAFVLGSLAGYLFALGGIIPAIVLHSSANLAGLIVLRFKEKNGN" FT gene complement(27624..28391) FT /locus_tag="TGAM_0025" FT /note="tg0025" FT CDS complement(27624..28391) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0025" FT /product="Conserved hypothetical protein" FT /db_xref="GOA:C5A2M5" FT /db_xref="InterPro:IPR020588" FT /db_xref="UniProtKB/TrEMBL:C5A2M5" FT /inference="protein motif:ProfileScan:PS50162 RECA_2 FT InterPro:IPR001553 RecA bacterial DNA recombination FT GO:Molecular Function:DNA binding (GO:0003677), Molecular FT Function:ATP binding (GO:0005524), Biological Process:DNA FT metabolism (GO:0006259), Molecular Function:DNA-dependent FT ATPase activity (GO:0008094)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32527.1" FT /translation="MGVELLSTGIPLLDEALGGGLLEDSNLLIIYTTYSRGWALGFEIV FT RRRIGMGDFGVILDSVLPITPLRMELRAVNFDIDELGRRGDLAVVDIFSSFYGLKYSED FT YVYTDPTIDESTFLPKYNRLYRRVLTERIGDRRPVGIDVTVDGMAFLLGEKNFIRVFQR FT LMALKERARISEKRKRPLNIFLLNRSRASDELVSWMSLYSQYVIEFQPTENFGVEKFFV FT RSSPLPDFEPSVEGYTFRLIRGRVEIEKPEKSG" FT gene 28551..29171 FT /locus_tag="TGAM_0026" FT /note="tg0026" FT CDS 28551..29171 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0026" FT /product="Conserved hypothetical protein" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2M6" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32528.1" FT /translation="MEEVSELKSVLERVEGRLIAAGKMYGAMNFAVWLAIMLLYYVMLG FT IFDISWQFNLIYWPLGFAVAMVFTGRIWKRLKRLGRVTGREIESSPLAGILIGLSWATG FT IVLGWVIVPDLNPGITEEASLATGFLTFIAFSVFAMWLVMAGFSPKNGEREIIPAFLIP FT ALGILRSTGMAEGAIAWAGFVVGLGFSLTVLWYLYSAFKAIER" FT gene 29176..29475 FT /locus_tag="TGAM_0027" FT /note="tg0027" FT CDS 29176..29475 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0027" FT /product="Transcription regulator, ArsR family" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A2M7" FT /inference="protein motif:COG:COG1846 Transcriptional FT regulators; K Transcription" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMPfam:PF01022 HTH_5 FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /protein_id="ACS32529.1" FT /translation="MESLRELTRNHFLGNPIRLGIMLYLLPRGKVLFKELLGVLEVTPG FT NLDSHLRTLEKAGYVKLYKVFADRPRTAVRITEKGAEETARYLRALKSVLEGMG" FT gene complement(29485..30102) FT /locus_tag="TGAM_0028" FT /note="tg0028" FT CDS complement(29485..30102) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0028" FT /product="Conserved hypothetical protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2M8" FT /protein_id="ACS32530.1" FT /translation="MTEIKLERIVMLSSLFLVFLGLLTALLNGRSDHIYRTLLAMAGLS FT VPLVLPRRLPNPPEKLRPFLAPVYDEKTMAVLSIFIAVHVSLVNVPFTGYDLFHRDWRN FT ADMISHFLGGLTVWLITAEILSGLRSLGINLTRGQIVAYSFVVFYGLSLGWEIAEKLSE FT SWIGFIAESTANKLRDLLMDTLGALFGLWMVGRRDYPFSLSD" FT gene complement(30135..32141) FT /locus_tag="TGAM_0029" FT /note="tg0029" FT CDS complement(30135..32141) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0029" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF460 family" FT /db_xref="InterPro:IPR007408" FT /db_xref="UniProtKB/TrEMBL:C5A2M9" FT /inference="protein motif:CDD:COG2433, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:DUF460, Protein of unknown FT function (DUF460)" FT /inference="protein motif:COG:COG2433 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:Gene3D:G3D.3.30.360.20 no FT description" FT /inference="protein motif:Gene3D:G3D.3.30.420.10 no FT description" FT /inference="protein motif:HMMPfam:PF04312 DUF460 FT InterPro:IPR007408 Protein of unknown function DUF460" FT /inference="protein motif:superfamily:SSF52540" FT /inference="protein motif:superfamily:SSF53098 Ribonuclease FT H-like InterPro:IPR012337 Polynucleotidyl transferase, FT Ribonuclease H fold" FT /inference="protein motif:superfamily:SSF53223 Aminoacid FT dehydrogenase-like, N-terminal domain" FT /inference="protein motif:superfamily:SSF56235 N-terminal FT nucleophile aminohydrolases (Ntn hydrolases)" FT /protein_id="ACS32531.1" FT /translation="MVLILIIGIDVVGENPKRFALVSWYNGRLERKGEFTLYRLIRFIR FT AKRPDIVAIDSVTELGDDLRKFLRALPPGTKLVQVTGRPGEQRSLQSLAREHGIRTTDR FT FDPYEEAKLSALLASKGVGYEVLAFEDEVIVKVTRGRSHGKGGWSQDRYRKRVHNLVRD FT KVREIEDRLRKAGVPFDLETEEKDYGLARGEFRIYASREELAGIVRPMRGGDVEVRIYP FT VERAELGFAPLKGEEAVRERRSVIVGIDPGITVGIAVIDLNGNVLALHSERNMPVGEVF FT RFISEIGHPVIVATDVSPAPGFVEKIARSFKANLFVPRESLRVEEKNELLRSLGIKVED FT DHQRDALAAAYKAYLRLKPKLEHVEAKLREAGLSKRADEVKALVIQGYNLGEAMQKVAR FT RERPREEEEPESGESVDVRPYVRKIRELEERIAFLERENEELRGIIREQRRTIERLERR FT IADYDEEVRRKVLRERELEAKVKRIELLETQLREAKAVIERLSRDLVKVKRMNVVEIRG FT SAVPLKVLRVLSWRELERIEREVGLRRGDVLFVVNPAGAGKAIAEELVEKGIKALITEK FT PLPGPVREVLREAHLPFFTSEELDVKRVDEFAVVERETLERAIEELLERWKKEDEEREA FT EKFLRLVEEYRIERIRELRRKAEEELEAEKRKR" FT gene 32229..32564 FT /locus_tag="TGAM_0030" FT /note="tg0030" FT CDS 32229..32564 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0030" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A2N0" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32532.1" FT /translation="MKMRVVFDKEYDVLTGVYRVRVRELEFDEELEKVLSGIDPSIKLG FT EEEIKLSELRDKVFELRSREEAEKIMSEIRGALIETLSSLIARFKEAQSFNGSVVYEID FT FNELFKE" FT gene complement(32550..33149) FT /gene="pcp" FT /locus_tag="TGAM_0031" FT /note="tg0031" FT CDS complement(32550..33149) FT /codon_start=1 FT /transl_table=11 FT /gene="pcp" FT /locus_tag="TGAM_0031" FT /product="Pyrrolidone-carboxylate peptidase (pcp)" FT /EC_number="3.4.19.3" FT /db_xref="GOA:C5A2N1" FT /db_xref="InterPro:IPR000816" FT /db_xref="InterPro:IPR016125" FT /db_xref="UniProtKB/TrEMBL:C5A2N1" FT /inference="protein motif:BlastProDom:PD008480 FT PCP_PYRAB_Q9UYQ9; InterPro:IPR000816 Peptidase C15, FT pyroglutamyl peptidase I GO:Molecular FT Function:pyroglutamyl-peptidase I activity (GO:0004219), FT Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:CDD:Pcp, Pyrrolidone-carboxylate FT peptidase (N-terminal pyroglutamyl peptidase) FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:Peptidase_C15, Pyroglutamyl FT peptidase" FT /inference="protein motif:CDD:Peptidase_C15, Pyroglutamyl FT peptidase (PGP) type I, also known as pyrrolidone carboxyl FT peptidase (pcp) type I:Enzymes responsible for cleaving FT pyroglutamate (pGlu) from the N-terminal end of specialized FT proteins" FT /inference="protein motif:COG:COG2039 FT Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl FT peptidase); O Posttranslational modification, protein FT turnover, chaperones" FT /inference="protein motif:FPrintScan:PR00706 PYROGLUPTASE FT InterPro:IPR000816 Peptidase C15, pyroglutamyl peptidase I FT GO:Molecular Function:pyroglutamyl-peptidase I activity FT (GO:0004219), Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:Gene3D:G3D.3.40.630.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR10095 FT PYRROLIDONE-CARBOXYLATE PEPTIDASE InterPro:IPR000816 FT Peptidase C15, pyroglutamyl peptidase I GO:Molecular FT Function:pyroglutamyl-peptidase I activity (GO:0004219), FT Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:HMMPanther:PTHR10095:SF1 FT PYRROLIDONE-CARBOXYLATE PEPTIDASE" FT /inference="protein motif:HMMPfam:PF01470 Peptidase_C15 FT InterPro:IPR000816 Peptidase C15, pyroglutamyl peptidase I FT GO:Molecular Function:pyroglutamyl-peptidase I activity FT (GO:0004219), Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:HMMPIR:PIRSF015592 FT Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl FT peptidase) InterPro:IPR000816 Peptidase C15, pyroglutamyl FT peptidase I GO:Molecular Function:pyroglutamyl-peptidase I FT activity (GO:0004219), Biological Process:proteolysis FT (GO:0006508)" FT /inference="protein motif:HMMTigr:TIGR00504 FT pyro_pdase:pyrrolidone-carboxylate peptid FT InterPro:IPR000816 Peptidase C15, pyroglutamyl peptidase I FT GO:Molecular Function:pyroglutamyl-peptidase I activity FT (GO:0004219), Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:ScanRegExp:PS01333 PYRASE_GLU FT InterPro:IPR000816 Peptidase C15, pyroglutamyl peptidase I FT GO:Molecular Function:pyroglutamyl-peptidase I activity FT (GO:0004219), Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:superfamily:SSF53182 Pyrrolidone FT carboxyl peptidase (pyroglutamate aminopeptidase)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32533.1" FT /translation="MKVLVTGFEPFGGEEINPSWEAVKALPDELNGATLLKVRLPVSFK FT RVREILPRLIAREKPDIVLLTGQAGGRPNVTVERVAINVMDSTMPDNDGFKPEDEPVFE FT GAPDAYFATIPIKDVVKALRKARIPAGVSNTVGTYVCNTAMFTALHTIAVSGMETKAGF FT IHVPFSHAQALEKPRPSMAQETINEAIRKALESLLE" FT gene 33210..34322 FT /locus_tag="TGAM_0032" FT /note="tg0032" FT CDS 33210..34322 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0032" FT /product="Geranylgeranyl reductase" FT /db_xref="GOA:C5A2N2" FT /db_xref="InterPro:IPR002938" FT /db_xref="InterPro:IPR003042" FT /db_xref="InterPro:IPR011777" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A2N2" FT /inference="protein motif:CDD:FixC, Dehydrogenases FT (flavoproteins) [Energy production and conversion]" FT /inference="protein motif:CDD:UbiH, FT 2-polyprenyl-6-methoxyphenol hydroxylase and related FT FAD-dependent oxidoreductases [Coenzyme metabolism / Energy FT production and conversion]" FT /inference="protein motif:COG:COG0644 Dehydrogenases FT (flavoproteins); C Energy production and conversion" FT /inference="protein motif:FPrintScan:PR00420 RNGMNOXGNASE FT InterPro:IPR003042 Aromatic-ring hydroxylase GO:Biological FT Process:electron transport (GO:0006118), Biological FT Process:metabolism (GO:0008152), Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:Gene3D:G3D.3.50.50.60 no FT description" FT /inference="protein motif:HMMPanther:PTHR10617 FT FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10617:SF27 gb FT def:bacteriochlorophyll synthase 43 kda subunit (chlp) FT [methanococcus jannaschii]" FT /inference="protein motif:HMMPfam:PF07992 Pyr_redox_2 FT InterPro:IPR013027 FAD-dependent pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:HMMTigr:TIGR02032 FT GG-red-SF:geranylgeranyl reductase family FT InterPro:IPR011777 Geranylgeranyl reductase, plantal and FT prokaryotic" FT /inference="protein motif:superfamily:SSF51905 FT FAD/NAD(P)-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32534.1" FT /translation="MRYDVLIIGGGPVGNYLAKLLAGKLDVAVVEKKRSFGGKACTGII FT GRESFERLGFPEEAVLNSLRGAVFRSRIQSFEIARKSAQAYIVDRKTLERKLAEEAVKR FT GADYFIGTTFTGFRGGRARLQHLKETFEVSADFYVGADGIASTVAREIGAKSNAEFLKG FT FEVEVVGEFRRDFVEVWVNKDLNAEFFCWVAPLSDEVARVGTLGSLEALNRFLRARGLR FT PTSILEFKAGTVGLGWRGPWAKDNVALVGDAALQIKPTTAGGIVFGAICAHHLARAILS FT GDLSTYEASCSQIKRQISFGLKVRKVFKGLSQEGIERLFEVFSSEEARKVIEEQADFDD FT HLRTFKAIAKRPRLLASLLRISPSLIRALI" FT gene 34364..34888 FT /gene="rr-1" FT /locus_tag="TGAM_0033" FT /note="tg0033" FT CDS 34364..34888 FT /codon_start=1 FT /transl_table=11 FT /gene="rr-1" FT /locus_tag="TGAM_0033" FT /product="Rubrerythrin-related protein (Rr)" FT /db_xref="GOA:C5A2N3" FT /db_xref="InterPro:IPR003251" FT /db_xref="InterPro:IPR009078" FT /db_xref="InterPro:IPR012347" FT /db_xref="UniProtKB/TrEMBL:C5A2N3" FT /inference="protein motif:CDD:Ferritin_like_AB, FT Ferritin-like domain found in Archaea and Bacteria FT (Ferritin_like_AB) is a member of a broad superfamily of FT ferritin-like diiron-carboxylate proteins" FT /inference="protein motif:COG:COG1633 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:Gene3D:G3D.1.20.120.190 no FT description InterPro:IPR012347 Ferritin-related" FT /inference="protein motif:superfamily:SSF47240 FT Ferritin-like InterPro:IPR009078 Ferritin/ribonucleotide FT reductase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32535.1" FT /translation="MVDMGVEVLERIRNLNERELLSYWIRGEYEEAETYWKLAERAKEL FT GLPAEVYETFKQLGDESKEHGDELYQIYRREYGEELVEVNVPNVEALNVLGKFWKVEDL FT GDVLRIALESEKLAETIYRKLAGECRDEKLRSIYLRLADIERGHYERLKALANKMGVEL FT DVEKECEKESS" FT gene complement(34885..35322) FT /gene="mbhN" FT /locus_tag="TGAM_0034" FT /note="tg0034" FT CDS complement(34885..35322) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhN" FT /locus_tag="TGAM_0034" FT /product="membrane bound hydrogenase, MbhN subunit (MbhN)" FT /db_xref="GOA:C5A2N4" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A2N4" FT /inference="protein motif:CDD:NuoI, Formate hydrogenlyase FT subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit FT (chain I) [Energy production and conversion]" FT /inference="protein motif:COG:COG1143 Formate hydrogenlyase FT subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit FT (chain I); C Energy production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR10849 FT NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 9-RELATED" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF54862 4Fe-4S FT ferredoxins" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32536.1" FT /translation="MKAPILVPTVLKNLTKKPATNLFPKTEPVPVPEDFRGMITYDVDK FT CVGCRMCYNVCPAGVFVCLPEIRKVALWTARCIYCGQCVDVCPTGALKLSRDFLLASYD FT NHDERFIPLKSEKVEEIKKKLEEQKKAKEKAKGEKKAEKKA" FT gene complement(35319..36302) FT /gene="mbhM" FT /locus_tag="TGAM_0035" FT /note="tg0035" FT CDS complement(35319..36302) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhM" FT /locus_tag="TGAM_0035" FT /product="membrane bound hydrogenase, MbhM subunit (MbhM)" FT /EC_number="1.6.5.3" FT /note="8 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2N5" FT /db_xref="InterPro:IPR001694" FT /db_xref="UniProtKB/TrEMBL:C5A2N5" FT /inference="protein motif:CDD:HyfC, Formate hydrogenlyase FT subunit 4 [Energy production and conversion]" FT /inference="protein motif:CDD:NADHdh, NADH dehydrogenase" FT /inference="protein motif:CDD:NuoH, NADH:ubiquinone FT oxidoreductase subunit 1 (chain H) [Energy production and FT conversion]" FT /inference="protein motif:COG:COG0650 Formate hydrogenlyase FT subunit 4; C Energy production and conversion" FT /inference="protein motif:HMMPanther:PTHR11432 NADH FT DEHYDROGENASE SUBUNIT 1 InterPro:IPR001694 FT Respiratory-chain NADH dehydrogenase, subunit 1 FT GO:Biological Process:electron transport (GO:0006118), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:HMMPfam:PF00146 NADHdh FT InterPro:IPR001694 Respiratory-chain NADH dehydrogenase, FT subunit 1 GO:Biological Process:electron transport FT (GO:0006118), Cellular Component:membrane (GO:0016020)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32537.1" FT /translation="MGSIVYPIAGLLGLYGFVSLASLLWEGIDRKLVARMQRRVGPPIV FT QPFYDFLKLASKETIVPKTANYMFRAAPVLALATAIALLAYTPMGFTPILASKGDVIVF FT IYLLTLICFFKVVGAISSGNPYAKIGAAREAAILVSREPAMMLAIFAIMWRLGKLGVDK FT PFSMGVFYQHNIWEIGTPMSFVGAVILLYVFSVWLASEMEVGFFNIPDAEEEIAEGLLV FT EYSGRYLALLKLTKALKTFIAASLVVAIFFPWGIADYFNLAGLSADIVNLLFHTLKVFI FT LLFIVGSVFRAVTGRLKVTQAVDFLWKNVFLASLVGSLLIAMEVIM" FT gene complement(36317..37594) FT /gene="mbhL" FT /locus_tag="TGAM_0036" FT /note="tg0036" FT CDS complement(36317..37594) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhL" FT /locus_tag="TGAM_0036" FT /product="membrane bound hydrogenase, MbhL subunit (MbhL)" FT /EC_number="1.6.5.3" FT /db_xref="GOA:C5A2N6" FT /db_xref="InterPro:IPR001135" FT /db_xref="InterPro:IPR001501" FT /db_xref="UniProtKB/TrEMBL:C5A2N6" FT /inference="protein motif:CDD:Complex1_49kDa, FT Respiratory-chain NADH dehydrogenase, 49 Kd subunit" FT /inference="protein motif:CDD:FrhA, Coenzyme F420-reducing FT hydrogenase, alpha subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:HyaB, Ni,Fe-hydrogenase I FT large subunit [Energy production and conversion]" FT /inference="protein motif:CDD:HycE, Ni,Fe-hydrogenase III FT large subunit [Energy production and conversion]" FT /inference="protein motif:CDD:NuoD, NADH:ubiquinone FT oxidoreductase 49 kD subunit 7 [Energy production and FT conversion]" FT /inference="protein motif:COG:COG3261 Ni,Fe-hydrogenase III FT large subunit; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.1.10.645.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11993 NADH FT DEHYDROGNEASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11993:SF11 NADH FT DEHYDROGNEASE-RELATED" FT /inference="protein motif:HMMPfam:PF00346 Complex1_49kDa FT InterPro:IPR001135 NADH-ubiquinone oxidoreductase, chain FT 49kDa GO:Molecular Function:electron transporter activity FT (GO:0005489), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:HMMPfam:PF00374 NiFeSe_Hases FT InterPro:IPR001501 Nickel-dependent hydrogenase, large FT subunit GO:Biological Process:electron transport FT (GO:0006118), Molecular Function:ferredoxin hydrogenase FT activity (GO:0008901), Molecular Function:nickel ion FT binding (GO:0016151)" FT /inference="protein motif:HMMPIR:PIRSF000230 FT [NiFe]-hydrogenase-3-type complex, large FT subunit/NADH:quinone oxidoreductase (complex I), subunit FT 49K/NdhH/NuoD" FT /inference="protein motif:superfamily:SSF56762 Nickel-iron FT hydrogenase, large subunit" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32538.1" FT /translation="MTKVEYWVKIPFGPIHPGLEEPEKFILTLDGERIVDVDVKLGYNL FT RGIQWIALRRNYIQIMYLAERICGICSFSHNHTYTRAVEEAAGIEVPERAEYIRVIIGE FT LERIHSHLLNLGVLAHDIGYDTVLHLTWLAREKVMDTLEAVAGNRVNYSMVTIGGVRRD FT IDEKRRRIILDMIKYYKEVFPQIEDIFLHDPTIEARFRDCAVISRRVALEQGAVGPTGR FT GSGIRDDARWSEKLGVYPDLGIKPVMPQDVTGERPRGDVFDRMAVRIGELWQSLELIEH FT ALDGMPDGKIKAFPKDNVLYAKLRLMVDGEGIGRYEAPRGELVHYVRGKKGSDKPLRWK FT PREPTFPNLFAVAEGVKGDQVADFVVAVASIDPCLSCTDRVAVVENGRKRILTEKDLIR FT ASIKKTREINPDVKGDPTPVGLGCSR" FT gene complement(37758..38324) FT /gene="mbhK" FT /locus_tag="TGAM_0037" FT /note="tg0037" FT CDS complement(37758..38324) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhK" FT /locus_tag="TGAM_0037" FT /product="membrane bound hydrogenase, MbhK subunit (MbhK)" FT /EC_number="1.6.5.3" FT /db_xref="GOA:C5A2N7" FT /db_xref="InterPro:IPR001268" FT /db_xref="UniProtKB/TrEMBL:C5A2N7" FT /inference="protein motif:BlastProDom:PD001581 FT O59105_PYRHO_O59105; InterPro:IPR001268 NADH dehydrogenase FT (ubiquinone), 30 kDa subunit GO:Biological FT Process:mitochondrial electron transport, NADH to FT ubiquinone (GO:0006120), Molecular Function:NADH FT dehydrogenase (ubiquinone) activity (GO:0008137)" FT /inference="protein motif:CDD:Complex1_30kDa, FT Respiratory-chain NADH dehydrogenase, 30 Kd subunit" FT /inference="protein motif:CDD:HycE, Ni,Fe-hydrogenase III FT component G [Energy production and conversion]" FT /inference="protein motif:COG:COG3262 Ni,Fe-hydrogenase III FT component G; C Energy production and conversion" FT /inference="protein motif:HMMPanther:PTHR11993 NADH FT DEHYDROGNEASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11993:SF9 FORMATE FT HYDROGENLYASE" FT /inference="protein motif:HMMPfam:PF00329 Complex1_30kDa FT InterPro:IPR001268 NADH dehydrogenase (ubiquinone), 30 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:superfamily:SSF50203 Bacterial FT enterotoxins InterPro:IPR008992 Bacterial enterotoxin" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32539.1" FT /translation="MNDNPVNEANEVREPTKTQKVAETIAKRFPNAQVEVRVNKWGRER FT VWVRIPREDYKALMRFIKELDGEAHYSIGIEQDLGDELGFLSHLAIHYDDAPAVSLIVD FT VRAPKDDPVIPDISDVFPIATQYEREAAEMVGIVFEGIPDKRRLFLPDDFPEGIYPLRL FT DDKGIPEEMVHNAGHPYYIRGGAKR" FT gene complement(38317..38841) FT /gene="mbhJ" FT /locus_tag="TGAM_0038" FT /note="tg0038" FT CDS complement(38317..38841) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhJ" FT /locus_tag="TGAM_0038" FT /product="membrane bound hydrogenase, MbhJ subunit (MbhJ)" FT /EC_number="1.6.5.3" FT /db_xref="GOA:C5A2N8" FT /db_xref="InterPro:IPR006137" FT /db_xref="InterPro:IPR014406" FT /db_xref="UniProtKB/TrEMBL:C5A2N8" FT /inference="protein motif:CDD:COG3260, Ni,Fe-hydrogenase FT III small subunit [Energy production and conversion]" FT /inference="protein motif:CDD:FrhG, Coenzyme F420-reducing FT hydrogenase, gamma subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:NuoB, NADH:ubiquinone FT oxidoreductase 20 kD subunit and related Fe-S FT oxidoreductases [Energy production and conversion]" FT /inference="protein motif:CDD:Oxidored_q6, NADH ubiquinone FT oxidoreductase, 20 Kd subunit" FT /inference="protein motif:COG:COG3260 Ni,Fe-hydrogenase III FT small subunit; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.700 no FT description" FT /inference="protein motif:HMMPanther:PTHR11995 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR11995:SF3 FT NADH-UBIQUINONE OXIDOREDUCTASE" FT /inference="protein motif:HMMPfam:PF01058 Oxidored_q6 FT InterPro:IPR006137 NADH ubiquinone oxidoreductase, 20 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:HMMPIR:PIRSF002913 FT [NiFe]-hydrogenase-3-type complex, small FT subunit/NADH:quinone oxidoreductase (complex I), subunit FT PSST/NdhK/NuoB" FT /inference="protein motif:superfamily:SSF56770 Nickel-iron FT hydrogenase, small subunit" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32540.1" FT /translation="MAITVPANNGSNSSERERLEKRIAQLCRYIGRSPWVFHVNTGSCN FT GCDIEIIAILTPRYDAERFGVKLVGSPRHADILLVTGPVTNQSLERVKLVYEQTPDPKI FT VVAVGACATGGGVFYESPFTNAPLSNVIPVDVYVPGCPPRPEAILHGVVLALEKLAKIL FT KGEVPGGEEHE" FT gene complement(38848..39204) FT /gene="mbhI" FT /locus_tag="TGAM_0039" FT /note="tg0039" FT CDS complement(38848..39204) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhI" FT /locus_tag="TGAM_0039" FT /product="membrane bound hydrogenase, MbhI subunit (MbhI)" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2N9" FT /inference="protein motif:COG:-; -" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32541.1" FT /translation="MREMFGYWDALYFVLVFIVGLILAYLLDKWAKRSGMGTREVGDGT FT KIFISGEDPEKVIPGFEHFEGSYTGRNVMWGLTYALKRFFTALRGEHTGLLTDYVSYLI FT ITTAFVMVVLLIWG" FT gene complement(39197..40744) FT /gene="mbhH" FT /locus_tag="TGAM_0040" FT /note="tg0040" FT CDS complement(39197..40744) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhH" FT /locus_tag="TGAM_0040" FT /product="membrane bound hydrogenase, MbhH subunit (MbhH)" FT /EC_number="1.6.5.3" FT /note="14 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2P0" FT /db_xref="InterPro:IPR001516" FT /db_xref="InterPro:IPR001750" FT /db_xref="UniProtKB/TrEMBL:C5A2P0" FT /inference="protein motif:CDD:HyfB, Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit FT [Energy production and conversion / Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:NuoL, NADH:ubiquinone FT oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ FT antiporter, MnhA subunit [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NuoM, NADH:ubiquinone FT oxidoreductase subunit 4 (chain M) [Energy production and FT conversion]" FT /inference="protein motif:CDD:NuoN, NADH:ubiquinone FT oxidoreductase subunit 2 (chain N) [Energy production and FT conversion]" FT /inference="protein motif:CDD:Oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains" FT /inference="protein motif:COG:COG0651 Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; C FT Energy production and conversion" FT /inference="protein motif:FPrintScan:PR01434 NADHDHGNASE5 FT InterPro:IPR003916 NADH-ubiquinone oxidoreductase, chain 5 FT GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:HMMPanther:PTHR19377 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR19377:SF21 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00361 Oxidored_q1 FT InterPro:IPR001750 NADH/Ubiquinone/plastoquinone (complex FT I) GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:HMMPfam:PF00662 Oxidored_q1_N FT InterPro:IPR001516 NADH-Ubiquinone oxidoreductase (complex FT I), chain 5/L, N-terminal GO:Molecular Function:NADH FT dehydrogenase (ubiquinone) activity (GO:0008137), FT Biological Process:ATP synthesis coupled electron transport FT (GO:0042773)" FT /inference="protein motif:HMMTigr:TIGR01972 FT NDH_I_M:proton-translocating NADH-quinone o FT InterPro:IPR010227 Proton-translocating NADH-quinone FT oxidoreductase, chain M GO:Molecular Function:NADH FT dehydrogenase (ubiquinone) activity (GO:0008137), FT Biological Process:ATP synthesis coupled electron transport FT (GO:0042773)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32542.1" FT /translation="MNGEAILPYLIIIPLFGAFSMPIVSLIGRKAREAWAVIISGATLA FT VASALFYSVWEDKGIIVYTLGAKSPLGQGVSFPIRIVWEVDLLGAIMVLMVALVSFLAV FT VYSLGYMKHDTGLDKYYTLILILELGMLGIAITGDLFNFYVFLEIMSIASYALVAFRND FT TWEGIEAGIKYMFVGSIASSLVLLGIALLYGQYGTLTMGYMAIKIIENPTVTAKVALAL FT FIAGLLFKSGASPVHMWLADAHPAAPSSISAMLSGLVIKVGGVYALARILLSIYGASVS FT VKTVGWVIIIFACLTLIIGNAMAVVQTDMKRLLAYSSVGQIGYILLGLGIGLAAYGSHT FT GEVALAGAIYHTFNHALMKALLFLIAGVVIHELGTRDLNELSGLAKTMPKTTFAFLIGA FT AAIVGMPPLNGFASKWLIYESSAIFNPILGAIAIIGTAFCTAAYVRVLYTFFGRPSERV FT MKARDPEASMLWPIIILAVAIVIMGLFPWQISEKIMLPAVKALEDQLAYISAVLGGA" FT gene complement(40741..41100) FT /gene="mbhG" FT /locus_tag="TGAM_0041" FT /note="tg0041" FT CDS complement(40741..41100) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhG" FT /locus_tag="TGAM_0041" FT /product="membrane bound hydrogenase, MbhG subunit (MbhG)" FT /EC_number="1.6.5.3" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2P1" FT /db_xref="InterPro:IPR001133" FT /db_xref="UniProtKB/TrEMBL:C5A2P1" FT /inference="protein motif:BlastProDom:PD006097 FT Q9V0R3_PYRAB_Q9V0R3; InterPro:IPR006672 Protein of unknown FT function DUF67 GO:Molecular Function:molecular function FT unknown (GO:0005554), Cellular Component:integral to FT membrane (GO:0016021)" FT /inference="protein motif:CDD:MnhC, Multisubunit Na+/H+ FT antiporter, MnhC subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:COG:COG1006 Multisubunit Na+/H+ FT antiporter, MnhC subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF00420 Oxidored_q2 FT InterPro:IPR001133 NADH-ubiquinone oxidoreductase, chain 4L FT GO:Biological Process:mitochondrial electron transport, FT NADH to ubiquinone (GO:0006120), Molecular Function:NADH FT dehydrogenase (ubiquinone) activity (GO:0008137)" FT /protein_id="ACS32543.1" FT /translation="MIQFQFITAFLLIVLGIYAFLAKRNLIKLILALDIIDSGIHLLLI FT SLGYRIELNEVPTAPIYTGYETLKSPMVGPLPQALVLTSIVIGVCVLSLAMALTINAYR FT HYGTLDVRALRRLRG" FT gene complement(41097..41531) FT /gene="mbhF" FT /locus_tag="TGAM_0042" FT /note="tg0042" FT CDS complement(41097..41531) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhF" FT /locus_tag="TGAM_0042" FT /product="membrane bound hydrogenase, MbhF subunit (MbhF)" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR007182" FT /db_xref="UniProtKB/TrEMBL:C5A2P2" FT /inference="protein motif:CDD:MnhB, Domain related to MnhB FT subunit of Na+/H+ antiporter" FT /inference="protein motif:CDD:MnhB, Multisubunit Na+/H+ FT antiporter, MnhB subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:COG:COG2111 Multisubunit Na+/H+ FT antiporter, MnhB subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF04039 MnhB FT InterPro:IPR007182 Na+/H+ antiporter MnhB subunit-related FT protein" FT /protein_id="ACS32544.1" FT /translation="MGLIVKTSARAIIPLIGIFGAYIVAHGHLTPGGGFQGGATIAGAG FT ILFLVAFGLNEMRKHYNKHLYSALEGLGGLVFLGAAMLGIGTAFFYNTLWHNGPFFNGK FT PGTLLSAGFLPIMNLAVGLKVFTGLVSALVAIAMYRRWRS" FT gene complement(41552..41848) FT /gene="mbhE" FT /locus_tag="TGAM_0043" FT /note="tg0043" FT CDS complement(41552..41848) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhE" FT /locus_tag="TGAM_0043" FT /product="membrane bound hydrogenase, MbhE subunit (MbhE)" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2P3" FT /inference="protein motif:COG:COG2111 Multisubunit Na+/H+ FT antiporter, MnhB subunit; P Inorganic ion transport and FT metabolism" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32545.1" FT /translation="MKKTIAYLSLLFILGVLLYVANPNYGLKFGPGGDDWKNLRYTDDY FT YITHGVQEVGGTNIVTDIVFDYRGYDTIGEATVLFTAIAGAVALLRPWRRDEE" FT gene complement(41845..42108) FT /gene="mbhD" FT /locus_tag="TGAM_0044" FT /note="tg0044" FT CDS complement(41845..42108) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhD" FT /locus_tag="TGAM_0044" FT /product="membrane bound hydrogenase, MbhD subunit (MbhD)" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2P4" FT /inference="protein motif:COG:COG1563 Predicted subunit of FT the Multisubunit Na+/H+ antiporter; P Inorganic ion FT transport and metabolism" FT /protein_id="ACS32546.1" FT /translation="MNALTLDMIIQAIILIGVLITAYLTIRFRDLLAATLMSAAMSLLL FT SLEFYMLHAPDVAIAEAAVGAGVVTALVVYGIAKTERWEVER" FT gene complement(42105..42476) FT /gene="mbhC" FT /locus_tag="TGAM_0045" FT /note="tg0045" FT CDS complement(42105..42476) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhC" FT /locus_tag="TGAM_0045" FT /product="membrane bound hydrogenase, MbhC subunit (MbhC)" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2P5" FT /db_xref="InterPro:IPR005133" FT /db_xref="UniProtKB/TrEMBL:C5A2P5" FT /inference="protein motif:CDD:MnhG, Multisubunit Na+/H+ FT antiporter, MnhG subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:PhaG_MnhG_YufB, Na+/H+ FT antiporter subunit" FT /inference="protein motif:COG:COG1320 Multisubunit Na+/H+ FT antiporter, MnhG subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF03334 PhaG_MnhG_YufB FT InterPro:IPR005133 Na+/H+ antiporter subunit" FT /inference="protein motif:HMMTigr:TIGR01300 FT CPA3_mnhG_phaG:monovalent cation/prot InterPro:IPR005133 FT Na+/H+ antiporter subunit" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32547.1" FT /translation="MSWVNYLIYAFLAVNITFNLLGSIALHRFPDVYTRLHGATKCTTF FT GTIFAVFAVATHALYRLHVTGDAKYLQMTLHSFVALIALLLTNPVGAHAIAKAAHLSGY FT KPAKAVIDAYEEKLGGGKE" FT gene complement(42473..42736) FT /gene="mbhB" FT /locus_tag="TGAM_0046" FT /note="tg0046" FT CDS complement(42473..42736) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhB" FT /locus_tag="TGAM_0046" FT /product="membrane bound hydrogenase, MbhB subunit (MbhB)" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2P6" FT /db_xref="InterPro:IPR007208" FT /db_xref="UniProtKB/TrEMBL:C5A2P6" FT /inference="protein motif:CDD:MnhF, Multisubunit Na+/H+ FT antiporter, MnhF subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:COG:COG2212 Multisubunit Na+/H+ FT antiporter, MnhF subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF04066 MrpF_PhaF FT InterPro:IPR007208 Multiple resistance and pH regulation FT protein F GO:Biological Process:ion transport (GO:0006811), FT Molecular Function:ion transporter activity (GO:0015075), FT Cellular Component:integral to membrane (GO:0016021)" FT /protein_id="ACS32548.1" FT /translation="MIEPVFFYSALIISFAAFLAILRILLGPSVPDRVVGVDTLNTLVV FT AAMVLLGAAYDRTIYIDIAIVYALLSYIGTLIIARYLQGGLE" FT gene complement(42733..43236) FT /gene="mbhA" FT /locus_tag="TGAM_0047" FT /note="tg0047" FT CDS complement(42733..43236) FT /codon_start=1 FT /transl_table=11 FT /gene="mbhA" FT /locus_tag="TGAM_0047" FT /product="membrane bound hydrogenase, MbhA subunit (MbhA)" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2P7" FT /db_xref="InterPro:IPR002758" FT /db_xref="UniProtKB/TrEMBL:C5A2P7" FT /inference="protein motif:BlastProDom:PD012569 FT Q9V0Q9_PYRAB_Q9V0Q9; InterPro:IPR002758 Predicted cation FT antiporter GO:Biological Process:cation transport FT (GO:0006812), Molecular Function:cation transporter FT activity (GO:0008324), Cellular Component:integral to FT membrane (GO:0016021)" FT /inference="protein motif:CDD:MnhE, Multisubunit Na+/H+ FT antiporter, MnhE subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:MNHE, Na+/H+ ion antiporter FT subunit" FT /inference="protein motif:COG:COG1863 Multisubunit Na+/H+ FT antiporter, MnhE subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF01899 MNHE FT InterPro:IPR002758 Predicted cation antiporter FT GO:Biological Process:cation transport (GO:0006812), FT Molecular Function:cation transporter activity FT (GO:0008324), Cellular Component:integral to membrane FT (GO:0016021)" FT /protein_id="ACS32549.1" FT /translation="MPFIVAFVFAYVLWLVLTAGTNGLLWSSQELIAGLIFAGIIGYAT FT KDVVGEKSTRFLNPIRWLEWIAYAPVLFWGMVKANFHVAWLVITGRIRPGIVRVPVDLE FT EDAQYTILGNSITLTPGTLTIDARPEEKALYVHWIDIPKGMERPESSEPVSGPFEKWAR FT RLGK" FT gene complement(43374..44951) FT /gene="mbc1A" FT /locus_tag="TGAM_0048" FT /note="tg0048" FT CDS complement(43374..44951) FT /codon_start=1 FT /transl_table=11 FT /gene="mbc1A" FT /locus_tag="TGAM_0048" FT /product="Membrane bound complex 1, subunit A (Mbc1A)" FT /EC_number="1.6.5.3" FT /note="13 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2P8" FT /db_xref="InterPro:IPR001750" FT /db_xref="UniProtKB/TrEMBL:C5A2P8" FT /inference="protein motif:CDD:HyfB, Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit FT [Energy production and conversion / Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:NuoL, NADH:ubiquinone FT oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ FT antiporter, MnhA subunit [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NuoM, NADH:ubiquinone FT oxidoreductase subunit 4 (chain M) [Energy production and FT conversion]" FT /inference="protein motif:CDD:NuoN, NADH:ubiquinone FT oxidoreductase subunit 2 (chain N) [Energy production and FT conversion]" FT /inference="protein motif:CDD:Oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains" FT /inference="protein motif:COG:COG0651 Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; C FT Energy production and conversion" FT /inference="protein motif:FPrintScan:PR01434 NADHDHGNASE5 FT InterPro:IPR003916 NADH-ubiquinone oxidoreductase, chain 5 FT GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:HMMPanther:PTHR19377 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR19377:SF19 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00361 Oxidored_q1 FT InterPro:IPR001750 NADH/Ubiquinone/plastoquinone (complex FT I) GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32550.1" FT /translation="MVRMNVVGLTPIIPILFAFALPLTSILVKGDRRIVQAYALTGTGL FT TLLSAVKLFQLAYSSNEPLIYTFGGWTAPVGIIYEVDRMSALIALVTAALMFLIAIYSY FT RYLEGEGGLEWYYTLYLGLEAGLLGVLLTGDAFNLFVMIEVTSIAAYALVMYYRDRGDS FT VVAGLKYALIGAVGTTMYFIALGVLYYGFGTLNFANLSALIHGMSFPVVGEPYRDVVIA FT SGVALALATWAFLIKAAVFPNHFWLPEAHPAAPSPISAILSGLVVNVGVYALARFLYTV FT YGGALTSTLSSVIHALSIVLMLLGAVSALFGALMMLVQRDVKRLIAYSTVMHMGYLVMA FT VGVGTQLALSAAIFHMVNHAIAKALLFLSAGVFIHAAGSRNLEDLAGLGRKMPVATFSL FT AVASLSLVGVPPFNVFFSKLLLFNAFLDENPVLALVLVVSSVTALVAYVRVFYEVWLGK FT PGKEVELRESWSMSGVCLVLALACVVVGLVAPYVVSHYVEPAAVQAVDYRVYIQKALEY FT AAKTKLGL" FT gene complement(44953..45438) FT /gene="mbc1B" FT /locus_tag="TGAM_0049" FT /note="tg0049" FT CDS complement(44953..45438) FT /codon_start=1 FT /transl_table=11 FT /gene="mbc1B" FT /locus_tag="TGAM_0049" FT /product="Membrane bound complex 1, subunit B (Mbc1B)" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2P9" FT /db_xref="InterPro:IPR002758" FT /db_xref="UniProtKB/TrEMBL:C5A2P9" FT /inference="protein motif:BlastProDom:PD012569 FT Q9UYP0_PYRAB_Q9UYP0; InterPro:IPR002758 Predicted cation FT antiporter GO:Biological Process:cation transport FT (GO:0006812), Molecular Function:cation transporter FT activity (GO:0008324), Cellular Component:integral to FT membrane (GO:0016021)" FT /inference="protein motif:CDD:MnhE, Multisubunit Na+/H+ FT antiporter, MnhE subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:MNHE, Na+/H+ ion antiporter FT subunit" FT /inference="protein motif:COG:COG1863 Multisubunit Na+/H+ FT antiporter, MnhE subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF01899 MNHE FT InterPro:IPR002758 Predicted cation antiporter FT GO:Biological Process:cation transport (GO:0006812), FT Molecular Function:cation transporter activity FT (GO:0008324), Cellular Component:integral to membrane FT (GO:0016021)" FT /inference="protein motif:superfamily:SSF48317 Acid FT phosphatase/Vanadium-dependent haloperoxidase FT InterPro:IPR008934 Acid phosphatase/vanadium-dependent FT haloperoxidase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32551.1" FT /translation="MRGVAATALLAFITYIIFTGSLTPYDLVTGVIVGVTIGLLVGRFL FT VENDAKALNPVRWAWGLVYFLWYFLVAEVKAHLDVMRRIITGDIEPGIVKVPLKVKSEY FT ARTLVANSITNTPGTVVVDVDENYLYVNWINVTTEEPEEAKKEICEEFEKYAERIFE" FT gene complement(45435..45839) FT /gene="mbc1C" FT /locus_tag="TGAM_0050" FT /note="tg0050" FT CDS complement(45435..45839) FT /codon_start=1 FT /transl_table=11 FT /gene="mbc1C" FT /locus_tag="TGAM_0050" FT /product="Membrane bound complex 1, subunit C (Mbc1C)" FT /EC_number="1.6.5.3" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2Q0" FT /db_xref="InterPro:IPR001133" FT /db_xref="UniProtKB/TrEMBL:C5A2Q0" FT /inference="protein motif:BlastProDom:PD006097 FT Q9UYN9_PYRAB_Q9UYN9; InterPro:IPR006672 Protein of unknown FT function DUF67 GO:Molecular Function:molecular function FT unknown (GO:0005554), Cellular Component:integral to FT membrane (GO:0016021)" FT /inference="protein motif:CDD:MnhC, Multisubunit Na+/H+ FT antiporter, MnhC subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:COG:COG1006 Multisubunit Na+/H+ FT antiporter, MnhC subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF00420 Oxidored_q2 FT InterPro:IPR001133 NADH-ubiquinone oxidoreductase, chain 4L FT GO:Biological Process:mitochondrial electron transport, FT NADH to ubiquinone (GO:0006120), Molecular Function:NADH FT dehydrogenase (ubiquinone) activity (GO:0008137)" FT /protein_id="ACS32552.1" FT /translation="MISLLWSITIVSLLATLIISVYGIVAKPNLVKKLIALTIFGDTAN FT VLVVLLGYRVIYPVKPPILPELSKSAVGEFVKTAVDPLPQALVITAVVIGMAVNILIAF FT AVIQIYRIYGTLDVREVGKSLPELLRRDEA" FT gene complement(45836..46594) FT /gene="mbc1D" FT /locus_tag="TGAM_0051" FT /note="tg0051" FT CDS complement(45836..46594) FT /codon_start=1 FT /transl_table=11 FT /gene="mbc1D" FT /locus_tag="TGAM_0051" FT /product="Membrane bound complex 1, subunit D (Mbc1D)" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR007182" FT /db_xref="UniProtKB/TrEMBL:C5A2Q1" FT /inference="protein motif:COG:COG2111 Multisubunit Na+/H+ FT antiporter, MnhB subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF04039 MnhB FT InterPro:IPR007182 Na+/H+ antiporter MnhB subunit-related FT protein" FT /protein_id="ACS32553.1" FT /translation="MKRLIGLLTILITVLGVACYVAQNLTPPENLHPLGEYYLENSYFG FT EHSAKSPEAVTSILWDYRGVDTLFETAVFFLAIIGSLTLFRLNKEQAEEAKQGEPKPQL FT PEPVVVVTKLTVAMILAVSASIALHGQLTPGGGFQGGSALAVAPLLVIAAYTKYALEKN FT GLDKTRAIIIRSIGLLGIALTALTPLLVSGYIMQNQPIFPAKALGVPLGGSLVLYNLFE FT YLAVGAGFTAVFLLLSIPEEKFKKFLGVRR" FT gene complement(46595..46849) FT /gene="mbc1E" FT /locus_tag="TGAM_0052" FT /note="tg0052" FT CDS complement(46595..46849) FT /codon_start=1 FT /transl_table=11 FT /gene="mbc1E" FT /locus_tag="TGAM_0052" FT /product="Membrane bound complex 1, subunit E (Mbc1E)" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2Q2" FT /inference="protein motif:COG:COG1563 Predicted subunit of FT the Multisubunit Na+/H+ antiporter; P Inorganic ion FT transport and metabolism" FT /protein_id="ACS32554.1" FT /translation="MIELHLTILAITALIGLIASYLAITEKDLLKAVGYSAIQAIAYAL FT IFHTLMAPDIVLAYVAIAVGIYSALLIFIIGKTERYEVV" FT gene complement(46846..47193) FT /gene="mbc1F" FT /locus_tag="TGAM_0054" FT /note="tg0054" FT CDS complement(46846..47193) FT /codon_start=1 FT /transl_table=11 FT /gene="mbc1F" FT /locus_tag="TGAM_0054" FT /product="Membrane bound complex 1, subunit F (Mbc1F)" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2Q3" FT /db_xref="InterPro:IPR005133" FT /db_xref="UniProtKB/TrEMBL:C5A2Q3" FT /inference="protein motif:CDD:MnhG, Multisubunit Na+/H+ FT antiporter, MnhG subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:PhaG_MnhG_YufB, Na+/H+ FT antiporter subunit" FT /inference="protein motif:COG:COG1320 Multisubunit Na+/H+ FT antiporter, MnhG subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF03334 PhaG_MnhG_YufB FT InterPro:IPR005133 Na+/H+ antiporter subunit" FT /inference="protein motif:HMMTigr:TIGR01300 FT CPA3_mnhG_phaG:monovalent cation/prot InterPro:IPR005133 FT Na+/H+ antiporter subunit" FT /inference="protein motif:ScanRegExp:PS01005 FT FORMATE_NITRITE_TP_1 InterPro:IPR000292 Formate/nitrite FT transporter GO:Molecular Function:transporter activity FT (GO:0005215), Biological Process:transport (GO:0006810), FT Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32555.1" FT /translation="MNTLFTLGAILVIIGGICDLFGAIGLLKFPNFYIRLHAATIGTIG FT GAAVPLFGVALLALSTNIPNKYAIAGASLITGIITLLAAPAGATALAYAAHKTNAVEWN FT PKTDHLKEARK" FT gene complement(47190..47477) FT /gene="mbc1G" FT /locus_tag="TGAM_0053" FT /note="tg0053" FT CDS complement(47190..47477) FT /codon_start=1 FT /transl_table=11 FT /gene="mbc1G" FT /locus_tag="TGAM_0053" FT /product="Membrane bound complex 1, subunit G (Mbc1G)" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2Q4" FT /db_xref="InterPro:IPR007208" FT /db_xref="UniProtKB/TrEMBL:C5A2Q4" FT /inference="protein motif:COG:COG2212 Multisubunit Na+/H+ FT antiporter, MnhF subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF04066 MrpF_PhaF FT InterPro:IPR007208 Multiple resistance and pH regulation FT protein F GO:Biological Process:ion transport (GO:0006811), FT Molecular Function:ion transporter activity (GO:0015075), FT Cellular Component:integral to membrane (GO:0016021)" FT /protein_id="ACS32556.1" FT /translation="MRLMSFGVVMLMRIILPLYVTAFILYTVRAIKGPTIPDIILAVDC FT MSFDIAAFMAILAVYFKSVYLISGAITLALWAYLLDIYIANHLTKKEVGA" FT gene complement(47508..48542) FT /gene="focA" FT /locus_tag="TGAM_0055" FT /note="tg0055" FT CDS complement(47508..48542) FT /codon_start=1 FT /transl_table=11 FT /gene="focA" FT /locus_tag="TGAM_0055" FT /product="Formate transporter (focA)" FT /note="8 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2Q5" FT /db_xref="InterPro:IPR000292" FT /db_xref="UniProtKB/TrEMBL:C5A2Q5" FT /inference="protein motif:CDD:FocA, Formate/nitrite family FT of transporters [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:Form_Nir_trans, FT Formate/nitrite transporter" FT /inference="protein motif:COG:COG2116 Formate/nitrite FT family of transporters; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF01226 Form_Nir_trans FT InterPro:IPR000292 Formate/nitrite transporter GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32557.1" FT /translation="MVDAKEKILYGVDTTFEGIAKKATPKFKTTPGRLLFAGFMAGAFI FT AFGFLLAVVAGCIAKYPPFAVGDTFNKALLKILLGAVFPVGLIAVVLGGADLWTGNVQF FT LSSAKVKGYADFKCVLYNWFGSYGGNFIGSIFLALMAIPLTGLFGHVGDPNLFGKTVVA FT IAHGKVSKDILALFFLGIGCNWLVNLAIWQSARVQDGAGKILAIWFPIFAFVAIGFEHA FT IANMWAIPTGIIASNYAVTWSQFFHNVIPVTFGNAVGGFLFVAFYYWYLSHPELTAERL FT VKEIVDFFVVFAVFWILATLIPAGIGIALDKAMGRGAMYAVPVVLSIYYIVGTFALAKV FT AKPA" FT gene complement(48549..48773) FT /gene="mhy2I-1" FT /locus_tag="TGAM_0056" FT /note="tg0056" FT CDS complement(48549..48773) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy2I-1" FT /locus_tag="TGAM_0056" FT /product="putative formate hydrogenlyase II subunit I FT (Mhy2I)" FT /db_xref="GOA:C5A2Q6" FT /db_xref="UniProtKB/TrEMBL:C5A2Q6" FT /protein_id="ACS32558.1" FT /translation="MLDHVDADFTLYEEVGEVSVETCKLIRKVFGRSYLTLDDLPGVLK FT LKLPGRDREVLMRALSGLKPDEKLKLERG" FT gene complement(48757..49608) FT /gene="mhy2H" FT /locus_tag="TGAM_0057" FT /note="tg0057" FT CDS complement(48757..49608) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy2H" FT /locus_tag="TGAM_0057" FT /product="formate hydrogenlyase II subunit H (Mhy2H)" FT /EC_number="1.6.5.3" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A2Q7" FT /db_xref="InterPro:IPR006137" FT /db_xref="InterPro:IPR014406" FT /db_xref="UniProtKB/TrEMBL:C5A2Q7" FT /inference="protein motif:CDD:COG3260, Ni,Fe-hydrogenase FT III small subunit [Energy production and conversion]" FT /inference="protein motif:CDD:NuoB, NADH:ubiquinone FT oxidoreductase 20 kD subunit and related Fe-S FT oxidoreductases [Energy production and conversion]" FT /inference="protein motif:CDD:Oxidored_q6, NADH ubiquinone FT oxidoreductase, 20 Kd subunit" FT /inference="protein motif:COG:COG3260 Ni,Fe-hydrogenase III FT small subunit; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.700 no FT description" FT /inference="protein motif:HMMPanther:PTHR11995 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR11995:SF3 FT NADH-UBIQUINONE OXIDOREDUCTASE" FT /inference="protein motif:HMMPfam:PF01058 Oxidored_q6 FT InterPro:IPR006137 NADH ubiquinone oxidoreductase, 20 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:superfamily:SSF56770 Nickel-iron FT hydrogenase, small subunit" FT /protein_id="ACS32559.1" FT /translation="MRLRSLYVFHLDTGACNGCEIELFDILTPYYDAERLGVRLAASPR FT HAHAMAATGPLTRQAYYAAKEAIKAMPPKPRIIVAIGTCACSGGIFYNGYPIYRRPESG FT REGQEYPRRGGIFELVQDLRDEGEYVGPVVYIPGCPPRPEEILYGVALALGLVEKQVKG FT EYYTEEVGFELPEYPIEERIRLSLRERLKYVVGYFDREKVLEDFMELVAKAKSAEELHG FT LIQGYCLKNPDPRVSLAMRVLEREFLRLKEKYGWEVKGSAKAPQGEVRGLQVSADGDAG FT PR" FT gene complement(49605..50102) FT /gene="mhy2G" FT /locus_tag="TGAM_0058" FT /note="tg0058" FT CDS complement(49605..50102) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy2G" FT /locus_tag="TGAM_0058" FT /product="formate hydrogenlyase II subunit G (Mhy2G)" FT /EC_number="1.6.5.3" FT /db_xref="GOA:C5A2Q8" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A2Q8" FT /inference="protein motif:CDD:NuoI, Formate hydrogenlyase FT subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit FT (chain I) [Energy production and conversion]" FT /inference="protein motif:COG:COG1143 Formate hydrogenlyase FT subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit FT (chain I); C Energy production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR10849 FT NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 9-RELATED" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF54862 4Fe-4S FT ferredoxins" FT /protein_id="ACS32560.1" FT /translation="MAVTLKYPFVKIEAPPEYRGVPHINPRLCIGCGACVNACPADALL FT RIDDYEKGTRKIVLDVGRCIRCARCDEACPTGAIRMTRNFEVATLDRKDHVEVVELRLH FT RCPNCGSYTDYTERALEKALQILPEGLFDGDEIRKRAILCRNCRRKLTVDDAVEASREV FT VE" FT gene complement(50104..51840) FT /gene="mhy2F" FT /locus_tag="TGAM_0059" FT /note="tg0059" FT CDS complement(50104..51840) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy2F" FT /locus_tag="TGAM_0059" FT /product="formate hydrogenlyase II subunit F (Mhy2F)" FT /EC_number="1.6.5.3" FT /db_xref="GOA:C5A2Q9" FT /db_xref="InterPro:IPR001135" FT /db_xref="InterPro:IPR001268" FT /db_xref="InterPro:IPR001501" FT /db_xref="InterPro:IPR020396" FT /db_xref="UniProtKB/TrEMBL:C5A2Q9" FT /inference="protein motif:BlastProDom:PD001581 FT Q8R9B5_THETN_Q8R9B5; InterPro:IPR001268 NADH dehydrogenase FT (ubiquinone), 30 kDa subunit GO:Biological FT Process:mitochondrial electron transport, NADH to FT ubiquinone (GO:0006120), Molecular Function:NADH FT dehydrogenase (ubiquinone) activity (GO:0008137)" FT /inference="protein motif:CDD:Complex1_30kDa, FT Respiratory-chain NADH dehydrogenase, 30 Kd subunit" FT /inference="protein motif:CDD:Complex1_49kDa, FT Respiratory-chain NADH dehydrogenase, 49 Kd subunit" FT /inference="protein motif:CDD:FrhA, Coenzyme F420-reducing FT hydrogenase, alpha subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:HyaB, Ni,Fe-hydrogenase I FT large subunit [Energy production and conversion]" FT /inference="protein motif:CDD:HycE, Ni,Fe-hydrogenase III FT component G [Energy production and conversion]" FT /inference="protein motif:CDD:HycE, Ni,Fe-hydrogenase III FT large subunit [Energy production and conversion]" FT /inference="protein motif:CDD:NiFeSe_Hases, FT Nickel-dependent hydrogenase" FT /inference="protein motif:CDD:NuoD, NADH:ubiquinone FT oxidoreductase 49 kD subunit 7 [Energy production and FT conversion]" FT /inference="protein motif:COG:COG3261 Ni,Fe-hydrogenase III FT large subunit; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.1.10.645.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11993 NADH FT DEHYDROGNEASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11993:SF9 FORMATE FT HYDROGENLYASE" FT /inference="protein motif:HMMPfam:PF00329 Complex1_30kDa FT InterPro:IPR001268 NADH dehydrogenase (ubiquinone), 30 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:HMMPfam:PF00346 Complex1_49kDa FT InterPro:IPR001135 NADH-ubiquinone oxidoreductase, chain FT 49kDa GO:Molecular Function:electron transporter activity FT (GO:0005489), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:HMMPfam:PF00374 NiFeSe_Hases FT InterPro:IPR001501 Nickel-dependent hydrogenase, large FT subunit GO:Biological Process:electron transport FT (GO:0006118), Molecular Function:ferredoxin hydrogenase FT activity (GO:0008901), Molecular Function:nickel ion FT binding (GO:0016151)" FT /inference="protein motif:HMMPIR:PIRSF000231 FT [NiFe]-hydrogenase-3-type complex, fused large FT subunit/NADH:quinone oxidoreductase (complex I), subunit FT NuoCD" FT /inference="protein motif:ScanRegExp:PS00542 COMPLEX1_30K FT InterPro:IPR001268 NADH dehydrogenase (ubiquinone), 30 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:superfamily:SSF50203 Bacterial FT enterotoxins InterPro:IPR008992 Bacterial enterotoxin" FT /inference="protein motif:superfamily:SSF56762 Nickel-iron FT hydrogenase, large subunit" FT /protein_id="ACS32561.1" FT /translation="MNMKEWARKITDEKVRERYVNEVIERFRDRIIRIERNADNQWIIE FT IRKEDLPEVIGYIINHPEWKETQLSTMVGADERPLRGKFSLIYWISINGASGDVVFGIK FT TYISEDDPKFPSVTPIHPGANWYEREVKDLLGLIPEGHPDPRRLVLPDDWPEGVYPLRK FT DFHYTDSPKREFTDETKYPYREPPKGTAVFPLGPYHVALDEPGHFRLYVKGEEIVDVDY FT RLFYQHRGIEKIGENRLTYDQVNFIAERICGICGTAHALAYAQAVEAAGGVEVPERAEY FT IRTVMAEIERLHSHLLNLGLACHDVGFDKGFMDAFRLREHVMWLAERLTGNRKTYGMVV FT IGGVRRDFLEYRRSMIEKVIRELREGFQKWADQTLSTKTFVKRCEGVGVLSYKDAKRWS FT SVGPWARGSGRDLDARRDHPFAAYKYLDFKVPVYKEGDVLARCLVRAEEILESIWIIEQ FT ALDEMPGGDILAEWKEIPPYQEAVGFTEAPRGEDVHYVMTGEGNRLYRWRIRASTYNNF FT PALPDAMRGNSVADAVLIIASMDPCYSCTERVQVVDARSGKVRVLTEKELTELSRKASR FT GV" FT gene complement(51837..52757) FT /gene="mhy2E" FT /locus_tag="TGAM_0060" FT /note="tg0060" FT CDS complement(51837..52757) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy2E" FT /locus_tag="TGAM_0060" FT /product="formate hydrogenlyase II subunit E (Mhy2E)" FT /EC_number="1.6.5.3" FT /note="7 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2R0" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:C5A2R0" FT /inference="protein motif:CDD:HyfC, Formate hydrogenlyase FT subunit 4 [Energy production and conversion]" FT /inference="protein motif:CDD:NADHdh, NADH dehydrogenase" FT /inference="protein motif:CDD:NuoH, NADH:ubiquinone FT oxidoreductase subunit 1 (chain H) [Energy production and FT conversion]" FT /inference="protein motif:COG:COG0650 Formate hydrogenlyase FT subunit 4; C Energy production and conversion" FT /inference="protein motif:HMMPanther:PTHR11432 NADH FT DEHYDROGENASE SUBUNIT 1 InterPro:IPR001694 FT Respiratory-chain NADH dehydrogenase, subunit 1 FT GO:Biological Process:electron transport (GO:0006118), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:HMMPfam:PF00146 NADHdh FT InterPro:IPR001694 Respiratory-chain NADH dehydrogenase, FT subunit 1 GO:Biological Process:electron transport FT (GO:0006118), Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:ScanRegExp:PS00668 COMPLEX1_ND1_2 FT InterPro:IPR001694 Respiratory-chain NADH dehydrogenase, FT subunit 1 GO:Biological Process:electron transport FT (GO:0006118), Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32562.1" FT /translation="MSGYERIAFSFIAVCLILFLPPLLDGVARKIKAKIQLRQGPSILQ FT TYYDLVTFLSMEPVYPTERLAFRLAPYIAFASAVSAALVLPYGRVIPVSFTGDIFVFLY FT VLAMVSIAYMIAGFSLNNTYTNTGANREMMIMLSIEPVLGLAIGTLTLNAHTLRIGAIP FT FAVTFTLSVLLAYGLLAYSVYVEGGFIPFDVAEAEQEILEGVFSEYSGYLLGIFKWALM FT IKRFALLWLLSSFISIPLVRNIANGALGGALILVTQLIVLFLLYTAVAIIESMNARLRI FT EQIIRQNAGVFVCSIAVLVLAALGW" FT gene complement(52760..54844) FT /gene="mhy2D" FT /locus_tag="TGAM_0061" FT /note="tg0061" FT CDS complement(52760..54844) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy2D" FT /locus_tag="TGAM_0061" FT /product="formate hydrogenlyase II subunit D (Mhy2D)" FT /EC_number="1.6.5.3" FT /note="15 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2R1" FT /db_xref="InterPro:IPR001750" FT /db_xref="UniProtKB/TrEMBL:C5A2R1" FT /inference="protein motif:CDD:HyfB, Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit FT [Energy production and conversion / Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:NuoL, NADH:ubiquinone FT oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ FT antiporter, MnhA subunit [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NuoM, NADH:ubiquinone FT oxidoreductase subunit 4 (chain M) [Energy production and FT conversion]" FT /inference="protein motif:CDD:NuoN, NADH:ubiquinone FT oxidoreductase subunit 2 (chain N) [Energy production and FT conversion]" FT /inference="protein motif:CDD:Oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains" FT /inference="protein motif:COG:COG0651 Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; C FT Energy production and conversion" FT /inference="protein motif:FPrintScan:PR01434 NADHDHGNASE5 FT InterPro:IPR003916 NADH-ubiquinone oxidoreductase, chain 5 FT GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:HMMPanther:PTHR19377 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00361 Oxidored_q1 FT InterPro:IPR001750 NADH/Ubiquinone/plastoquinone (complex FT I) GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:ScanRegExp:PS00430 FT TONB_DEPENDENT_REC_1 InterPro:IPR010916 TonB box, FT N-terminal" FT /protein_id="ACS32563.1" FT /translation="MKMKELFTLTVILYLISILAVLPLRKNYRASITVGHVFTGLASLS FT LLAFTVSVLPEALKGKAIEFTYDLGVAKIPFHVDGLSLILCLVLGSLGLATSIYSPKYM FT EFYERFGRGWLYVVLYSTFVLSMVLIVTTSNFLWFVFFWEVMTFTSYLLMVWENDEEYV FT RKAGWKYFVTMHVASTLPLIVALALLYAKAGSIEGLNFDNLSKLHLGPIYYLLFLVGFG FT SKAGVVPLHFWLPDAHPAAPSNVSALLSGAMIKVAVYGLIRTTCFILGLNETFGYIVAI FT LGTVTLTVGTLYALKQTDAKRLLAYHSVGQMGYIWLGVGAGIALMAKGGSYAAFGAIAM FT AAGLYHLVNHAIFKGLLFLSAGSVLYRTHTRELNVLGGLAKLMPLTALFTFIAAMSIAG FT EPPFNGFMSKWMIYQGTFLSGDGLLVFCGVMALFISAATLASFVKFYTTAFGGVPTKVT FT ENAEEVPSSMLVGKGFLAALCLLFGLIPSSIIPLLLAPGKVLTGTDLSGWISTKYWLVT FT IKAPGMPSGGETYFNPWLLVGVLGVLAGAMLVSYPNRPKKVVKVWTTGEPVRMEHYKLK FT AMHYYGPFEEYIHGLYHSGDVLSEWGSGVCSAVAGGYLTLGKTLLRWADKVGRGITSAG FT RWYVENGKEVYLDEAVASPFVQLAKGLAIGLEELSLNYNLLLAVAVAVLGLILLILAGW FT " FT gene complement(54841..56061) FT /gene="mhy2C2" FT /locus_tag="TGAM_0062" FT /note="tg0062" FT CDS complement(54841..56061) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy2C2" FT /locus_tag="TGAM_0062" FT /product="formate hydrogenlyase II subunit C' (Mhy2C2)" FT /EC_number="1.6.5.3" FT /note="11 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2R2" FT /db_xref="InterPro:IPR001750" FT /db_xref="InterPro:IPR003918" FT /db_xref="UniProtKB/TrEMBL:C5A2R2" FT /inference="protein motif:CDD:HyfB, Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit FT [Energy production and conversion / Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:NuoL, NADH:ubiquinone FT oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ FT antiporter, MnhA subunit [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NuoM, NADH:ubiquinone FT oxidoreductase subunit 4 (chain M) [Energy production and FT conversion]" FT /inference="protein motif:CDD:NuoN, NADH:ubiquinone FT oxidoreductase subunit 2 (chain N) [Energy production and FT conversion]" FT /inference="protein motif:CDD:Oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains" FT /inference="protein motif:COG:COG0651 Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; C FT Energy production and conversion" FT /inference="protein motif:FPrintScan:PR01437 NUOXDRDTASE4 FT InterPro:IPR003918 NADH-ubiquinone oxidoreductase, chain 4 FT GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:HMMPanther:PTHR19377 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00361 Oxidored_q1 FT InterPro:IPR001750 NADH/Ubiquinone/plastoquinone (complex FT I) GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:superfamily:SSF51445 FT (Trans)glycosidases" FT /protein_id="ACS32564.1" FT /translation="MRMFEVTLTFSLDRISVLFALNVAILGIAALIGSLKYMEIYRFKP FT KIPYYPTLLIFIAAMLLIPMVQDWLSFLFLWEIMTLASYFLIIYDWPEENVKRAGWKYF FT VTMHLFDTSPLMLAVTLYYAGQGTFNFGPISEYKTAIVALFLLGFAAKAGLFPLHFWLP FT DAHPAAPSPVSALMSGAMVELGIYGSIRVLDAVNWSVPGWIAWLVGAMAVLSMLSAILT FT YPHQTDVKRLFAWSTIDNIGWMYAFLLAGLLGVAGIEKGVSYYVLAHGLAKGAAFLTTG FT ALLYVFGTRNLDEMKGMINSDQTTAGLLIASIFALEGVPPFNLFLNKVEAIKTLFQVNG FT WLALFVGLEWVIAFIIFLRTIHAYVISDGKPELRRKLPVSIAIAVIILLILSLASQFVC FT NYVWTRW" FT gene complement(56058..57509) FT /gene="mhy2C1" FT /locus_tag="TGAM_0063" FT /note="tg0063" FT CDS complement(56058..57509) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy2C1" FT /locus_tag="TGAM_0063" FT /product="formate hydrogenlyase II subunit C (Mhy2C1)" FT /EC_number="1.6.5.3" FT /note="14 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2R3" FT /db_xref="InterPro:IPR001750" FT /db_xref="UniProtKB/TrEMBL:C5A2R3" FT /inference="protein motif:CDD:HyfB, Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit FT [Energy production and conversion / Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:NuoL, NADH:ubiquinone FT oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ FT antiporter, MnhA subunit [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NuoM, NADH:ubiquinone FT oxidoreductase subunit 4 (chain M) [Energy production and FT conversion]" FT /inference="protein motif:CDD:NuoN, NADH:ubiquinone FT oxidoreductase subunit 2 (chain N) [Energy production and FT conversion]" FT /inference="protein motif:CDD:Oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains" FT /inference="protein motif:COG:COG1009 NADH:ubiquinone FT oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ FT antiporter, MnhA subunit; C Energy production and FT conversion" FT /inference="protein motif:FPrintScan:PR01434 NADHDHGNASE5 FT InterPro:IPR003916 NADH-ubiquinone oxidoreductase, chain 5 FT GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:HMMPanther:PTHR19377 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00361 Oxidored_q1 FT InterPro:IPR001750 NADH/Ubiquinone/plastoquinone (complex FT I) GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /protein_id="ACS32565.1" FT /translation="MVGMEELFLLSFSIPLAAGLMLFKLDGKRADYFMLITVIITTLLN FT VLGVYEFCSSGMKTVHEALLTSKSLGEVYGVLIDPMSVAVGLVVSTAGLLFMLYAVDYM FT SPNNREHPVYEGKGRFYAWMVLFIGATLAFVYSSSVLQLLIFFEIMSLACWGVVSYYGS FT KKAKRSAYKAFIVTNFGAMIGLYTAVGVGITHLHNLSLFAYSSLESHLKLIVFLAVVIA FT AFTKSAQFPFYSWLPDAMVAPTPASAFLHGAAMVEMGVFLLARFIQFMQPIPREGFYVM FT AGLIIATQLICILMYPSQRDAKRLLAYSTIAESGLMYVALATAVLGMESGLQASVFQLF FT NHAYIKGLAFLTAGTFSYALGTLEMDRIRGLIKSPVVGYGWTFALLGLAGVPPFGVFFG FT KLGILSNANAMRESLLVLAMFALLLLDSAVFLMVSLKRVHSMVFSEGNERVEITPLMKV FT VMVILLILAIIAPYIAYPLVAKVGW" FT gene complement(57511..58011) FT /gene="mhy2B" FT /locus_tag="TGAM_0064" FT /note="tg0064" FT CDS complement(57511..58011) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy2B" FT /locus_tag="TGAM_0064" FT /product="formate hydrogenlyase II subunit B (Mhy2B)" FT /db_xref="GOA:C5A2R4" FT /db_xref="InterPro:IPR000813" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A2R4" FT /inference="protein motif:CDD:HybA, Fe-S-cluster-containing FT hydrogenase components 1 [Energy production and FT conversion]" FT /inference="protein motif:CDD:HycB, Fe-S-cluster-containing FT hydrogenase components 2 [Energy production and FT conversion]" FT /inference="protein motif:CDD:NarY, Nitrate reductase beta FT subunit [Energy production and conversion]" FT /inference="protein motif:COG:COG0437 FT Fe-S-cluster-containing hydrogenase components 1; C Energy FT production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:FPrintScan:PR00354 7FE8SFRDOXIN FT InterPro:IPR000813 7Fe ferredoxin GO:Molecular FT Function:electron transporter activity (GO:0005489), FT Biological Process:electron transport (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR11938 GLUTAMATE FT SYNTHASE/FERREDOXIN/FERREDOXIN--NADP REDUCTASE" FT /inference="protein motif:HMMPanther:PTHR11938:SF4 FT GLUTAMATE SYNTHASE" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF54862 4Fe-4S FT ferredoxins" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32566.1" FT /translation="MARKTVFIDFSKCIECRACEVACEREHNGRSFINVFEWQEMAAMA FT LNCRHCEKAPCVEVCPTNALYRDEDGAVLLAPQKCIGCLMCGIVCPFGIPELDVLDKIM FT MKCDLCSHRRAEGKLPACVETCPTDALLFGDFNDIQRMRRREFTEKAIEIAKKGERISL FT RAL" FT gene complement(58017..60167) FT /gene="mhy2A" FT /locus_tag="TGAM_0065" FT /note="tg0065" FT CDS complement(58017..60167) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy2A" FT /locus_tag="TGAM_0065" FT /product="formate hydrogenlyase II subunit A (Mhy2A)" FT /EC_number="1.2.1.2" FT /db_xref="GOA:C5A2R5" FT /db_xref="InterPro:IPR006478" FT /db_xref="InterPro:IPR006656" FT /db_xref="InterPro:IPR006657" FT /db_xref="InterPro:IPR006963" FT /db_xref="InterPro:IPR009010" FT /db_xref="UniProtKB/TrEMBL:C5A2R5" FT /inference="protein motif:COG:COG0243 Anaerobic FT dehydrogenases, typically selenocysteine-containing; C FT Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.2.40.40.20 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.228.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.90.55.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11615 FT NADH-UBIQUINONE OXIDOREDUCTASE FE-S PROTEIN 1" FT /inference="protein motif:HMMPanther:PTHR11615:SF12 FORMATE FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00384 Molybdopterin FT InterPro:IPR006656 Molybdopterin oxidoreductase FT GO:Molecular Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:HMMPfam:PF01568 Molydop_binding FT InterPro:IPR006657 Molydopterin dinucleotide-binding region FT GO:Molecular Function:oxidoreductase activity (GO:0016491), FT Molecular Function:molybdenum ion binding (GO:0030151)" FT /inference="protein motif:HMMPfam:PF04879 Molybdop_Fe4S4 FT InterPro:IPR006963 Molybdopterin oxidoreductase Fe4S4 FT region GO:Molecular Function:oxidoreductase activity FT (GO:0016491)" FT /inference="protein motif:HMMTigr:TIGR01591 FT Fdh-alpha:formate dehydrogenase, alpha sub FT InterPro:IPR006478 Formate dehydrogenase, alpha subunit FT GO:Molecular Function:formate dehydrogenase activity FT (GO:0008863), Cellular Component:formate dehydrogenase FT complex (GO:0009326), Biological Process:formate metabolism FT (GO:0015942)" FT /inference="protein motif:superfamily:SSF50692 ADC-like FT InterPro:IPR009010 Aspartate decarboxylase-like fold" FT /inference="protein motif:superfamily:SSF53706 Formate FT dehydrogenase/DMSO reductase, domains 1-3" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32567.1" FT /translation="MKGVFPLEEKLVPVVCPYCGVGCRLYIKSLDGYPRGIEYAKDIPG FT ISNENGKLCPKGNAVLEYLLAKDRLKKPLKATEQGKFVEISWSEAIKEVAERLRAYSKD FT DPNAMMFFGSARTFNEPNYLIQKLARMLGTNNVDHCARLCHSSTVSGLKAVFGAGAMTN FT TYKDIEEANVIFIIGHNYAETHPVGFRYVLKAKERGAKVIVADPRFTRTAWFADIFLQH FT YPGTDIALLNGMMHVIIKENLYDEDFVRRRCVGFDELARTVEKFTPEYVEKITGVPAEL FT IVQAARTFATAGKGVITWAMGLTQHTHGHDNVRLAATLSAICGYQGKEGCGVSPMRGQN FT NVQGACDLGVLPNVFPGYQAVTDPEKRKFFEEFWGVELSGEVGLTVIEAAHAIEKGKVK FT AYYVMGENPVISDANTNHVLKALQKLEFMVVQDIVPTPTMEFADIVLPAAAMLENEGSL FT TNTERRVQWSFQALNPPGEARPDWWIVSEIGKAAGFSGDGARGFRYTSPEDILREINAC FT TPQYRGITPERLKSNLAGIHWPCPSEDHPGTRVLYKERFLTPDGKAHLAAVDYRGPAEV FT PDEEYPFLLTTIRYVGHYHTLTMTGRSRALVKRWPEPLAEIHPEDAERLGIKTGDWIKI FT ETRRGAYPVRAKVTRTVKKGVIAVPWHWGANVLTNDALDPVSKIPETKACACRIAKISE FT EEARELMKAVPKVIPEFEVVKG" FT gene complement(60418..61248) FT /gene="frhB" FT /locus_tag="TGAM_0066" FT /note="tg0066" FT CDS complement(60418..61248) FT /codon_start=1 FT /transl_table=11 FT /gene="frhB" FT /locus_tag="TGAM_0066" FT /product="coenzyme F420-reducing hydrogenase, beta subunit FT (frhB)" FT /EC_number="1.12.98.1" FT /db_xref="GOA:C5A2R6" FT /db_xref="InterPro:IPR007516" FT /db_xref="InterPro:IPR007525" FT /db_xref="UniProtKB/TrEMBL:C5A2R6" FT /inference="protein motif:CDD:FrhB, Coenzyme F420-reducing FT hydrogenase, beta subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:FrhB_FdhB_C, Coenzyme F420 FT hydrogenase/dehydrogenase, beta subunit C terminus" FT /inference="protein motif:CDD:FrhB_FdhB_N, Coenzyme F420 FT hydrogenase/dehydrogenase, beta subunit N terminus" FT /inference="protein motif:COG:COG1035 Coenzyme FT F420-reducing hydrogenase, beta subunit; C Energy FT production and conversion" FT /inference="protein motif:HMMPfam:PF04422 FrhB_FdhB_N FT InterPro:IPR007516 Coenzyme F420 hydrogenase/dehydrogenase FT beta subunit, N-terminal" FT /inference="protein motif:HMMPfam:PF04432 FrhB_FdhB_C FT InterPro:IPR007525 Coenzyme F420 hydrogenase/dehydrogenase FT beta subunit, C-terminal" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32568.1" FT /translation="MMPIGENLLGQFRGVYLARAKDEEILKRKVASGGAVTALLCYALD FT KGLVDGVVTSKRVKGFEGKAVVARNREELLEAAGNSWSIVPFAARIKAKIEEEDLRAVA FT IVCLPCQAQFFGQMRDFPILETDFGNRIKYIISLFCMGTFAFEAFLNYLRVRYGVRAED FT IKDIRLGREFLEVHHDDTVLAIPLKEAYSYLQTGCLVCTDYAGLWSDISAGFVESEPGW FT TVLITRNVRGEELVKGAEKEDYIELRDGVHVLGDVLKRAREKVARAQRNMAQLF" FT gene complement(61245..61934) FT /gene="frhG" FT /locus_tag="TGAM_0067" FT /note="tg0067" FT CDS complement(61245..61934) FT /codon_start=1 FT /transl_table=11 FT /gene="frhG" FT /locus_tag="TGAM_0067" FT /product="Coenzyme F420 hydrogenase subunit gamma (frhG)" FT /EC_number="1.12.98.1" FT /db_xref="GOA:C5A2R7" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR006137" FT /db_xref="InterPro:IPR014406" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A2R7" FT /inference="protein motif:CDD:COG3260, Ni,Fe-hydrogenase FT III small subunit [Energy production and conversion]" FT /inference="protein motif:CDD:FrhG, Coenzyme F420-reducing FT hydrogenase, gamma subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:Oxidored_q6, NADH ubiquinone FT oxidoreductase, 20 Kd subunit" FT /inference="protein motif:COG:COG1941 Coenzyme FT F420-reducing hydrogenase, gamma subunit; C Energy FT production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.700 no FT description" FT /inference="protein motif:HMMPanther:PTHR11995 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR11995:SF3 FT NADH-UBIQUINONE OXIDOREDUCTASE" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:HMMPfam:PF01058 Oxidored_q6 FT InterPro:IPR006137 NADH ubiquinone oxidoreductase, 20 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF56770 Nickel-iron FT hydrogenase, small subunit" FT /protein_id="ACS32569.1" FT /translation="MMLMEKLKVLHVDFAGCEGCNVSIIRAYPKLMNEIDLDISYLRDG FT SCQYGEYDVALITGGACMNEPRILEELKEIREKARVVVAFGSCASLGGILRFARGGQEP FT RPDHRNFQPINSVIPVDYSIPGCPPTPQMLQSFFKFFMAGNESRLRLFKVTAGLKKLSG FT FDLIDDIVLTGLCIGCGACELSCPTGAIRLVEKRPTIIQERCIRCGTCYIRCPRASQLI FT CLGGEKP" FT gene complement(61931..63112) FT /gene="frhA" FT /locus_tag="TGAM_0068" FT /note="tg0068" FT CDS complement(61931..63112) FT /codon_start=1 FT /transl_table=11 FT /gene="frhA" FT /locus_tag="TGAM_0068" FT /product="Coenzyme F420 hydrogenase subunit alpha (frhA)" FT /EC_number="1.12.98.1" FT /db_xref="GOA:C5A2R8" FT /db_xref="InterPro:IPR001501" FT /db_xref="InterPro:IPR018194" FT /db_xref="UniProtKB/TrEMBL:C5A2R8" FT /inference="protein motif:CDD:FrhA, Coenzyme F420-reducing FT hydrogenase, alpha subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:HyaB, Ni,Fe-hydrogenase I FT large subunit [Energy production and conversion]" FT /inference="protein motif:CDD:HycE, Ni,Fe-hydrogenase III FT large subunit [Energy production and conversion]" FT /inference="protein motif:CDD:NiFeSe_Hases, FT Nickel-dependent hydrogenase" FT /inference="protein motif:COG:COG3259 Coenzyme FT F420-reducing hydrogenase, alpha subunit; C Energy FT production and conversion" FT /inference="protein motif:Gene3D:G3D.1.10.645.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11993 NADH FT DEHYDROGNEASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11993:SF9 FORMATE FT HYDROGENLYASE" FT /inference="protein motif:HMMPfam:PF00374 NiFeSe_Hases FT InterPro:IPR001501 Nickel-dependent hydrogenase, large FT subunit GO:Biological Process:electron transport FT (GO:0006118), Molecular Function:ferredoxin hydrogenase FT activity (GO:0008901), Molecular Function:nickel ion FT binding (GO:0016151)" FT /inference="protein motif:ScanRegExp:PS00507 NI_HGENASE_L_1 FT InterPro:IPR001501 Nickel-dependent hydrogenase, large FT subunit GO:Biological Process:electron transport FT (GO:0006118), Molecular Function:ferredoxin hydrogenase FT activity (GO:0008901), Molecular Function:nickel ion FT binding (GO:0016151)" FT /inference="protein motif:superfamily:SSF56762 Nickel-iron FT hydrogenase, large subunit" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32570.1" FT /translation="MKALGEITLDKVCRIAGEAKLILYEEDGVVQDALFIATAPVRGFE FT KMVVGKNPLFAVEAVMRICGLCHASHGIAASEAIEHAIGVTPPRNGRLMREALGLINRA FT QSHALLFLMVAGDLIKEEKRNDVLFKLMDFHAKISDYLLKLGGAATHPPNLTIGGMLSV FT PKWSVFNNLKARFKDLTASWEAAEELLIDEDIQTEIADELREAKRPFKYLASGFFYGDR FT YNIEWDKVSSVPYYEFRKEEAARESTTLVSFYDGEKVETGPRARMITYREFRDESLYGL FT HLARIEDTRLAIQRLGEILDEIRIEEPFRTGDITFRPGKGVGVYEAPRGTLIHYVELGE FT EGRVLKSRIVVPTMFNIPVMEEMAKGLSVKAAEAVMRLYDPCIPCTTHVVRLR" FT gene complement(63279..63782) FT /locus_tag="TGAM_0069" FT /note="tg0069" FT CDS complement(63279..63782) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0069" FT /product="7Fe ferredoxin" FT /db_xref="GOA:C5A2R9" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A2R9" FT /inference="protein motif:CDD:HybA, Fe-S-cluster-containing FT hydrogenase components 1 [Energy production and FT conversion]" FT /inference="protein motif:CDD:HycB, Fe-S-cluster-containing FT hydrogenase components 2 [Energy production and FT conversion]" FT /inference="protein motif:CDD:NarY, Nitrate reductase beta FT subunit [Energy production and conversion]" FT /inference="protein motif:COG:COG0437 FT Fe-S-cluster-containing hydrogenase components 1; C Energy FT production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR11938 GLUTAMATE FT SYNTHASE/FERREDOXIN/FERREDOXIN--NADP REDUCTASE" FT /inference="protein motif:HMMPanther:PTHR11938:SF4 FT GLUTAMATE SYNTHASE" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF54862 4Fe-4S FT ferredoxins" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32571.1" FT /translation="MRRILHVDYSLCIGCETCEGVCEFIHHGKPNIRVYYTVTGIPIPI FT TCRHCEKAPCMDVCPAGAIFKDYDGAVIIDPNKCIGCMMCLAVCPFGVPTFNVKLKVMT FT KCDMCADRRQLGMAPACSEMCPAEAIFFGKPEEIEDEIRRRTAEKIARERMSTISLEGV FT GRLP" FT gene complement(63779..64849) FT /gene="gltD-1" FT /locus_tag="TGAM_0070" FT /note="tg0070" FT CDS complement(63779..64849) FT /codon_start=1 FT /transl_table=11 FT /gene="gltD-1" FT /locus_tag="TGAM_0070" FT /product="Glutamate synthase [NADPH] small chain (gltD)" FT /EC_number="1.4.1.13" FT /db_xref="GOA:C5A2S0" FT /db_xref="InterPro:IPR000103" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:C5A2S0" FT /inference="protein motif:CDD:FMO-like, Flavin-binding FT monooxygenase-like" FT /inference="protein motif:CDD:GltD, NADPH-dependent FT glutamate synthase beta chain and related oxidoreductases FT [Amino acid transport and metabolism / General function FT prediction only]" FT /inference="protein motif:CDD:HcaD, Uncharacterized FT NAD(FAD)-dependent dehydrogenases [General function FT prediction only]" FT /inference="protein motif:CDD:Lpd, Pyruvate/2-oxoglutarate FT dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) FT component, and related enzymes [Energy production and FT conversion]" FT /inference="protein motif:CDD:NirB, NAD(P)H-nitrite FT reductase [Energy production and conversion]" FT /inference="protein motif:CDD:Pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:CDD:TrkA, Predicted flavoprotein FT involved in K+ transport [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:TrxB, Thioredoxin reductase FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:COG:COG0493 NADPH-dependent FT glutamate synthase beta chain and related oxidoreductases; FT E Amino acid transport and metabolism" FT /inference="protein motif:FPrintScan:PR00368 FADPNR FT InterPro:IPR013027 FAD-dependent pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:FPrintScan:PR00419 ADXRDTASE FT InterPro:IPR000759 Adrenodoxin reductase GO:Biological FT Process:electron transport (GO:0006118)" FT /inference="protein motif:FPrintScan:PR00469 PNDRDTASEII FT InterPro:IPR000103 Pyridine nucleotide-disulphide FT oxidoreductase, class-II GO:Biological Process:electron FT transport (GO:0006118), Molecular Function:oxidoreductase FT activity (GO:0016491)" FT /inference="protein motif:Gene3D:G3D.3.50.50.60 no FT description" FT /inference="protein motif:HMMPanther:PTHR11938 GLUTAMATE FT SYNTHASE/FERREDOXIN/FERREDOXIN--NADP REDUCTASE" FT /inference="protein motif:HMMPanther:PTHR11938:SF9 FT GLUTAMATE SYNTHASE" FT /inference="protein motif:HMMPfam:PF07992 Pyr_redox_2 FT InterPro:IPR013027 FAD-dependent pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:ProfileScan:PS50205 NAD_BINDING FT InterPro:IPR000205 NAD-binding site" FT /inference="protein motif:superfamily:SSF51905 FT FAD/NAD(P)-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32572.1" FT /translation="MMKMKGMNFAFLCREKPEPTGKKVAIIGAGPAGLAAAGYLVCQGH FT EVHVYDKLPEPGGLMLFGIPEFRIPIYRVRDGCERLENAFGVKFFPRTKVCFGNPNENG FT DDFVERRIDFEEIVKNYDAVLIATGTWNAYVPTIPGSDLEGVFPALEYLFKIKSAKLGH FT MDWDKVPPVEGKKVIVIGAGHTAVDAALESVNLGAEKVYLSYRRTIREAPAGAYEINLL FT QQRGVKWLERTMPVRIIGENGRVRAIELVKTKLSEPDETGRRRPVPIEGSNFQIDVDYV FT VCAVGQMPTPPFAKDTGIALDRKGRIVVDSRHMTSREGVFAAGDVVLGPSKVGRAVKDG FT LYAAESIHYWLMEVKE" FT gene complement(64846..65274) FT /locus_tag="TGAM_0071" FT /note="tg0071" FT CDS complement(64846..65274) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0071" FT /product="4Fe-4S ferredoxin, iron-sulfur binding" FT /db_xref="GOA:C5A2S1" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A2S1" FT /inference="protein motif:CDD:NuoI, Formate hydrogenlyase FT subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit FT (chain I) [Energy production and conversion]" FT /inference="protein motif:COG:COG1143 Formate hydrogenlyase FT subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit FT (chain I); C Energy production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR19248 RNASE L FT INHIBITOR-RELATED" FT /inference="protein motif:HMMPanther:PTHR19248:SF2 RNASE L FT INHIBITOR" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF54862 4Fe-4S FT ferredoxins" FT /protein_id="ACS32573.1" FT /translation="MDIKALKSSIWGREGISVLEVEKCIGCGLCAEACPFNAITIVNDS FT TRRITFEPEKCGSCGFECNEACPLGAIRGIPDGMTLTFEFARCRACGRKLPYTVKEAEY FT MASKLREAGEDDTLVYLCDDCKRKRIFDVARSYEAYVR" FT gene 65424..66497 FT /locus_tag="TGAM_0072" FT /note="tg0072" FT CDS 65424..66497 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0072" FT /product="Zinc-binding alcohol dehydrogenase" FT /db_xref="GOA:C5A2S2" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR002328" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A2S2" FT /inference="protein motif:CDD:AdhC, Zn-dependent alcohol FT dehydrogenases, class III [Energy production and FT conversion]" FT /inference="protein motif:CDD:AdhP, Zn-dependent alcohol FT dehydrogenases [General function prediction only]" FT /inference="protein motif:CDD:ADH_zinc_N, Zinc-binding FT dehydrogenase" FT /inference="protein motif:CDD:Qor, NADPH:quinone reductase FT and related Zn-dependent oxidoreductases [Energy production FT and conversion / General function prediction only]" FT /inference="protein motif:CDD:Tdh, Threonine dehydrogenase FT and related Zn-dependent dehydrogenases [Amino acid FT transport and metabolism / General function prediction FT only]" FT /inference="protein motif:COG:COG1063 Threonine FT dehydrogenase and related Zn-dependent dehydrogenases; E FT Amino acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.90.180.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11695 ALCOHOL FT DEHYDROGENASE-RELATED InterPro:IPR002085 Alcohol FT dehydrogenase superfamily, zinc-containing GO:Molecular FT Function:zinc ion binding (GO:0008270), Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:HMMPanther:PTHR11695:SF83 FT 2,3-BUTANEDIOL DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00107 ADH_zinc_N FT InterPro:IPR013149 Alcohol dehydrogenase, zinc-binding" FT /inference="protein motif:HMMPfam:PF08240 ADH_N FT InterPro:IPR013154 Alcohol dehydrogenase GroES-like" FT /inference="protein motif:ProfileScan:PS50205 NAD_BINDING FT InterPro:IPR000205 NAD-binding site" FT /inference="protein motif:ScanRegExp:PS00059 ADH_ZINC FT InterPro:IPR002328 Alcohol dehydrogenase, zinc-containing FT GO:Molecular Function:zinc ion binding (GO:0008270), FT Molecular Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:superfamily:SSF50129 GroES-like FT InterPro:IPR011032 GroES-like" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32574.1" FT /translation="MHEMLAVRWHGRRDLRLEDIPEPQVKPGFIKIKVKACGICGTDLN FT EYLNGPIFIPTERPHPLTGRTAPVTIGHEFAGEVVEIGEGVKGFEVGDRVAIFPVIHCG FT ECYFCRRGMENLCVNFGVTGLSEDGGFAEYALVRPYQAYKIPESVSFEEAALVEPLSVG FT VRAVKKAGLLPGDSVVIIGAGPIGLSVLLVARASGAGKVIVVEPSRVRRKKALELGADI FT AIDPSGRSTEEVVDEIVGETELGADVSFECVGLNETFKTAVESIRKGGRAVILGVFKCL FT TSFNAKGLVVGEKSIVGSVSHSADDFCRGISLIASGRVDVGPMITSRVGLEEIIERGFE FT ELAKNREGHVKILAVGK" FT gene 66535..67299 FT /gene="nadE" FT /locus_tag="TGAM_0073" FT /note="tg0073" FT CDS 66535..67299 FT /codon_start=1 FT /transl_table=11 FT /gene="nadE" FT /locus_tag="TGAM_0073" FT /product="NH(3)-dependent NAD synthetase (nadE)" FT /EC_number="6.3.1.5" FT /db_xref="GOA:C5A2S3" FT /db_xref="InterPro:IPR003694" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR018126" FT /db_xref="InterPro:IPR022310" FT /db_xref="InterPro:IPR022926" FT /db_xref="UniProtKB/TrEMBL:C5A2S3" FT /inference="protein motif:CDD:NadE, NAD synthase [Coenzyme FT metabolism]" FT /inference="protein motif:CDD:NAD_synthase, NAD synthase" FT /inference="protein motif:CDD:NAD_synthase, NAD+ synthase FT is a homodimer, which catalyzes the final step in de novo FT nicotinamide adenine dinucleotide (NAD+) biosynthesis, an FT amide transfer from either ammonia or glutamine to FT nicotinic acid adenine dinucleotide (NaAD)" FT /inference="protein motif:COG:COG0171 NAD synthase; H FT Coenzyme transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.610 no FT description" FT /inference="protein motif:HMMPanther:PTHR11750 HIT PROTEIN FT FAMILY MEMBER-RELATED" FT /inference="protein motif:HMMPanther:PTHR11750:SF3 FT NH(3)-DEPENDENT NAD(+) SYNTHETASE" FT /inference="protein motif:HMMPfam:PF02540 NAD_synthase FT InterPro:IPR003694 NAD+ synthase GO:Molecular Function:NAD+ FT synthase (glutamine-hydrolyzing) activity (GO:0003952), FT Molecular Function:ATP binding (GO:0005524), Biological FT Process:NAD biosynthesis (GO:0009435)" FT /inference="protein motif:HMMTigr:TIGR00552 nadE:NAD+ FT synthetase InterPro:IPR003694 NAD+ synthase GO:Molecular FT Function:NAD+ synthase (glutamine-hydrolyzing) activity FT (GO:0003952), Molecular Function:ATP binding (GO:0005524), FT Biological Process:NAD biosynthesis (GO:0009435)" FT /inference="protein motif:ScanRegExp:PS00228 FT TUBULIN_B_AUTOREG InterPro:IPR002453 Beta tubulin FT GO:Molecular Function:structural molecule activity FT (GO:0005198), Cellular Component:microtubule (GO:0005874), FT Biological Process:microtubule-based movement (GO:0007018)" FT /inference="protein motif:ScanRegExp:PS00304 SASP_1 FT InterPro:IPR001448 Small acid-soluble spore protein, FT alpha/beta type GO:Molecular Function:double-stranded DNA FT binding (GO:0003690), Biological Process:DNA topological FT change (GO:0006265)" FT /inference="protein motif:superfamily:SSF52402 Adenine FT nucleotide alpha hydrolases-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32575.1" FT /translation="MRELNYGEVIEKLVSFIQEKVGEAKSNGVVIGISGGVDSATTAYL FT AVKALGRERVLGLIMPYYNNQDVDDARLVCSSLGIECREIGIKPIVDSFVAGLGFQPDK FT RSLGNIMSRTRMVLLYAHANAKNYLVLGTGNRSEFLTGYFTKWGDGASDYAPLINLYKT FT EVWEVAKLLGVPERIIEKKPRAGLWEGQTDEDELGISYRLLDEILWRLVDLKMPKEEIA FT GELGIPVERVEYVENLVRRSEHKRRLPLGPEF" FT gene 67421..67648 FT /locus_tag="TGAM_0074" FT /note="tg0074" FT CDS 67421..67648 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0074" FT /product="Putative nucleotide binding protein, containing FT TRAM domain" FT /db_xref="InterPro:IPR002792" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:C5A2S4" FT /inference="protein motif:CDD:COG3269, Predicted FT RNA-binding protein, contains TRAM domain [General function FT prediction only]" FT /inference="protein motif:CDD:TrmA, SAM-dependent FT methyltransferases related to tRNA FT (uracil-5-)-methyltransferase [Translation, ribosomal FT structure and biogenesis]" FT /inference="protein motif:COG:COG3269 Predicted RNA-binding FT protein, contains TRAM domain; R General function FT prediction only" FT /inference="protein motif:HMMPanther:PTHR11061 RNA FT METHYLTRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR11061:SF5 RNA FT METHYLTRANSFERASE-RELATED" FT /inference="protein motif:HMMPfam:PF01938 TRAM FT InterPro:IPR002792 Deoxyribonuclease/rho motif-related FT TRAM" FT /inference="protein motif:ProfileScan:PS50926 TRAM FT InterPro:IPR002792 Deoxyribonuclease/rho motif-related FT TRAM" FT /protein_id="ACS32576.1" FT /translation="MVLGMYGDRFGGYGNEAPVKVGERYRVKIESLGKGGDGIAKIKGF FT VIFVPNTQVGDEVEIVINSVKRKFAFAQVI" FT gene 67744..68010 FT /gene="moaD-1" FT /locus_tag="TGAM_0075" FT /note="tg0075" FT CDS 67744..68010 FT /codon_start=1 FT /transl_table=11 FT /gene="moaD-1" FT /locus_tag="TGAM_0075" FT /product="Molybdopterin synthase, small subunit (moaD)" FT /db_xref="InterPro:IPR003749" FT /db_xref="InterPro:IPR010038" FT /db_xref="InterPro:IPR012675" FT /db_xref="InterPro:IPR016155" FT /db_xref="UniProtKB/TrEMBL:C5A2S5" FT /inference="protein motif:CDD:MoaD, MoaD family" FT /inference="protein motif:CDD:MoaD, Molybdopterin FT converting factor, small subunit [Coenzyme metabolism]" FT /inference="protein motif:COG:COG1977 Molybdopterin FT converting factor, small subunit; H Coenzyme transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.10.20.200 no FT description" FT /inference="protein motif:HMMPfam:PF02597 ThiS FT InterPro:IPR003749 ThiamineS GO:Biological Process:sulfur FT metabolism (GO:0006790)" FT /inference="protein motif:HMMTigr:TIGR01687 moaD_arch:MoaD FT family protein InterPro:IPR010038 MoaD, archaeal" FT /inference="protein motif:superfamily:SSF54285 MoaD/ThiS" FT /protein_id="ACS32577.1" FT /translation="MKVTVRYFARYRSLVGKGEEEVELPEGATVMDLIEKIKEMHPVLR FT NEVFAEDDDLADVNVSRNGRYVRFDETLREGDVVAIFPPVSGG" FT gene complement(68011..69327) FT /locus_tag="TGAM_0076" FT /note="tg0076" FT CDS complement(68011..69327) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0076" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2S6" FT /protein_id="ACS32578.1" FT /translation="MILANLSYNRFEATLQASLKPSGGLNKMKPEYLMVRGMRRVYSLL FT VVVAFIVSMLPAQSVGACFNPSDLYSVEVLLNKPGVEYNLSPAVPPVMEIEGKTFLLRV FT WNGSKGLHVWIGIPTVRHLGAYWVYSGTFILTSDALEKLRALGWIVNGSKLIKGNATFR FT ITDQGWECKSDSDCATGGCSGEVCGRKGEVEKIVTPCVYAPWYECFQLTSCGCVNGTCS FT WKPNPEFEKCLRSHGVDPSKVIRAGPTGIVGKAPDPEDLREAVEELLKATGINCTKIEV FT QSRSEEGPAYDTSEVNASMVMMKVLEELVARGVVRGLTEEDIEEIAEVSEWGNAGWNSH FT IGWYETKNGTYAWIPYDESKDPLLVRFVGCGAWDTGNGSSVVSTGEPGTSEGLQHGTPE FT HIGSPRPSSSVSDSVKALCGPGVITLLSLWPLMIVRRRK" FT gene 69342..70634 FT /gene="eno-1" FT /locus_tag="TGAM_0077" FT /note="tg0077" FT CDS 69342..70634 FT /codon_start=1 FT /transl_table=11 FT /gene="eno-1" FT /locus_tag="TGAM_0077" FT /product="Enolase (2-phosphoglycerate dehydratase) FT (2-phospho-D-glycerate hydro-lyase) (eno)" FT /EC_number="4.2.1.11" FT /db_xref="GOA:C5A2S7" FT /db_xref="InterPro:IPR000941" FT /db_xref="InterPro:IPR020809" FT /db_xref="InterPro:IPR020810" FT /db_xref="InterPro:IPR020811" FT /db_xref="UniProtKB/Swiss-Prot:C5A2S7" FT /inference="protein motif:BlastProDom:PD000902 FT ENO_PYRFU_Q8U477; InterPro:IPR000941 Enolase GO:Cellular FT Component:phosphopyruvate hydratase complex (GO:0000015), FT Molecular Function:phosphopyruvate hydratase activity FT (GO:0004634), Biological Process:glycolysis (GO:0006096)" FT /inference="protein motif:COG:COG0148 Enolase; G FT Carbohydrate transport and metabolism" FT /inference="protein motif:FPrintScan:PR00148 ENOLASE FT InterPro:IPR000941 Enolase GO:Cellular FT Component:phosphopyruvate hydratase complex (GO:0000015), FT Molecular Function:phosphopyruvate hydratase activity FT (GO:0004634), Biological Process:glycolysis (GO:0006096)" FT /inference="protein motif:Gene3D:G3D.3.20.20.120 no FT description" FT /inference="protein motif:Gene3D:G3D.3.30.390.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11902 ENOLASE FT InterPro:IPR000941 Enolase GO:Cellular FT Component:phosphopyruvate hydratase complex (GO:0000015), FT Molecular Function:phosphopyruvate hydratase activity FT (GO:0004634), Biological Process:glycolysis (GO:0006096)" FT /inference="protein motif:HMMPfam:PF00113 Enolase_C FT InterPro:IPR000941 Enolase GO:Cellular FT Component:phosphopyruvate hydratase complex (GO:0000015), FT Molecular Function:phosphopyruvate hydratase activity FT (GO:0004634), Biological Process:glycolysis (GO:0006096)" FT /inference="protein motif:HMMPfam:PF03952 Enolase_N FT InterPro:IPR000941 Enolase GO:Cellular FT Component:phosphopyruvate hydratase complex (GO:0000015), FT Molecular Function:phosphopyruvate hydratase activity FT (GO:0004634), Biological Process:glycolysis (GO:0006096)" FT /inference="protein motif:HMMPIR:PIRSF001400 Enolase" FT /inference="protein motif:HMMTigr:TIGR01060 FT eno:phosphopyruvate hydratase InterPro:IPR000941 Enolase FT GO:Cellular Component:phosphopyruvate hydratase complex FT (GO:0000015), Molecular Function:phosphopyruvate hydratase FT activity (GO:0004634), Biological Process:glycolysis FT (GO:0006096)" FT /inference="protein motif:ScanRegExp:PS00164 ENOLASE FT InterPro:IPR000941 Enolase GO:Cellular FT Component:phosphopyruvate hydratase complex (GO:0000015), FT Molecular Function:phosphopyruvate hydratase activity FT (GO:0004634), Biological Process:glycolysis (GO:0006096)" FT /inference="protein motif:superfamily:SSF51604 Enolase FT C-terminal domain-like" FT /inference="protein motif:superfamily:SSF54826 Enolase FT N-terminal domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32579.1" FT /translation="MENPFEITAVVAREILDSRGNPTVEVEVYTPVSMGRAAVPSGAST FT GTHEALELRDGGKRFHGKGVRRAVENVNKIIAPEIIGMDVTWQRDIDMLMIELDGTENK FT SNLGANAILGVSLAVAKAAANALGLPLYQYIGGTNAYVMPVPMSNVINGGVHAGNELDF FT QEFMIMPVGAKSFREGIRWVSETYHTLKKVIAEKYGKNAVNVGDEGGFAPPMKEVTEPL FT EVLIKAIEEAGYKPGDEIAFALDAASSEFYDEKLGKYVVGGKEYDRGELLELYRELVSK FT YPIVSIEDPFHEEDWEGFVMITRELGGKIQIVGDDLFVTNPKRIRKGIEMGAANALLLK FT VNQIGTLSEAIDAAYTAFRAGYGVVVSHRSGETEDATIADLAVALNAGQIKTGAPARSD FT RNAKYNQLIRIEEELEGIAVYPGKRFRNPFL" FT gene 70647..71288 FT /locus_tag="TGAM_0078" FT /note="tg0078" FT CDS 70647..71288 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0078" FT /product="Hypothetical protein" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2S8" FT /protein_id="ACS32580.1" FT /translation="MFLVKIMRMSLTPINHRYLLLTAELLLVLAVLLSATSHYGLSVVC FT LGGSTILYYSGMRELVRKRFGTWAVRRFTIAYFLRALSWFLIGISAFYTYSAVIRNVFP FT FGPSEFFATSIVALVGAVVNYLSVGIRNSVLWKIEGLRTSLWFSRLNSIVLFMAAIVPF FT LPALAKIWELTGFLKILAAPALSSFTFLALLSKVFYLKFLLTSENLKTEK" FT gene complement(71310..71792) FT /locus_tag="TGAM_0079" FT /note="tg0079" FT CDS complement(71310..71792) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0079" FT /product="Transcription regulator, PadR-like family" FT /db_xref="InterPro:IPR005149" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A2S9" FT /inference="protein motif:CDD:COG1695, Predicted FT transcriptional regulators [Transcription]" FT /inference="protein motif:CDD:PadR, Transcriptional FT regulator PadR-like family" FT /inference="protein motif:COG:COG1695 Predicted FT transcriptional regulators; K Transcription" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMPfam:PF03551 PadR FT InterPro:IPR005149 Transcriptional regulator PadR-like" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /inference="protein motif:superfamily:SSF46934 UBA-like FT InterPro:IPR009060 UBA-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32581.1" FT /translation="MSDSSLVRNLFTVPMKNLILLIIGLKGETHGYEILKEIERITFGN FT WKPSHGNLYTMLNKLADEGLVESREEYRGKRRVIRYRLTEKGWLYLREANELTLKSLYL FT AIQYHERLREKLREMGYGRELAKEAVGEYLKLLDGIIEILQKKREQLRDMIENSPN" FT gene 71925..76046 FT /locus_tag="TGAM_0080" FT /note="tg0080" FT CDS 71925..76046 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0080" FT /product="Membrane protein, putative drug exporter ( RND FT superfamily)" FT /note="10 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A2T0" FT /db_xref="InterPro:IPR000731" FT /db_xref="InterPro:IPR004869" FT /db_xref="UniProtKB/TrEMBL:C5A2T0" FT /inference="protein motif:CDD:AcrB, Cation/multidrug efflux FT pump [Defense mechanisms]" FT /inference="protein motif:CDD:COG1033, Predicted exporters FT of the RND superfamily [General function prediction only]" FT /inference="protein motif:CDD:COG2409, Predicted drug FT exporters of the RND superfamily [General function FT prediction only]" FT /inference="protein motif:COG:COG2409 Predicted drug FT exporters of the RND superfamily; R General function FT prediction only" FT /inference="protein motif:ProfileScan:PS50156 SSD FT InterPro:IPR000731 Sterol-sensing 5TM box" FT /inference="protein motif:superfamily:SSF82866" FT /inference="protein motif:superfamily:SSF82866 Multidrug FT efflux transporter AcrB transmembrane domain" FT /protein_id="ACS32582.1" FT /translation="MAWNEWIAKHPKTVLAIWVALILILAPLAGKIGELTDYSTEQMVS FT HKIESIRVQDIMSEEFTKAQNENMTYLIITNISVNDENARKAYYAFKDRVEGRYATNVT FT SYYDALDMLWDMDYNLTLNITRMTANITGILYEAVINSEKGFGQVLNLMYHLKNTTEMT FT KNSLVGAAQGYLALKNNLTFLWNQTVLLRNALNQTDSAYVALHRNLTSTSEMLRSLNST FT LIELNSGLYALNSTYGKTYVGVMVVHKAILATGAYDRGNLTQVEAEVIANQTGTTPEFV FT YAVFDAVYPIYAQGGSLAVTDTLLANVTKAIVLAGTPDDQKPLVEAYGTAFYLGVKAFD FT EKVGSEYALQSMNESQLMETVSGIASQALQSLPQIIAQGNQTVSVPGFGTLDAKTFASI FT IETAISLGPEPAPEAVENATVQLGLGFTAKAPENPLANVENPEEILRVLLVRGPTPELE FT AELLTAGMAKMMNGTAGQLGPVIVQTVMAYDPTAEGVLSKNASVLEEATLKVIEGMVGN FT IGIELDENVLKAIYESNGDERVIEDIAKELLKEGTIKQLESANVPEAEKIAEKIVETVT FT ADPEGIISGERLEDATIEVIASMSEGMVPEGVDIDISEVVKELYEGADPRTVAENLFLK FT GAEEQMSQMNATAIPEEFKGVFMNLTKAVVKNYPLSDEEIESLVKETVLSMISSYAKDN FT PYGVELNFNETLLADIAFRFKDDPSAITREDVRPLAEELWPVIREKAGTYLSMLKSEDN FT TTILITFVPFGKPGPDRDEYLYRAQNATKVKEIALEEFRKYFPEASGALGGTPIQMHEM FT TEYGKKDNQKTSQASIISALIVLFILMGGALLATFLPFTGVATSALTALGIAYLLARSG FT ILNIGSWAQMLTITTALGLGIDYSTYYVHRFKEYIAEGYDHEKAVAEALRRAKDAVLAS FT AFTDIIAFASFVLAWEFPIFQQMGMVVPLAVIAVLLASLTLIPAITALIGDKQIFWWPR FT HIKHIETLDVHERSRIAEWVVNHAKVVLLIGLLIAVPATYTFFNFEGTHDMSLFLPEGS FT ETLTFMQLSQEKLGAAITSPNYVIIDLGHNLTDEDLKVIDEITAHVTRMEGVKAVYSPT FT RPYGEPVSNLTLSAVKALGGDRFISSKGDKVMIQVESVYEPTEEGAKKLVRALRSYMAE FT LEKEGRIKEGLVGGGAALSMDLTDRINDIFWHRIIPVALVLMFLSLIPTLKGLPAVVST FT MMTIFLGVMTSIWVSTWLFGRVFGKEVMWFLPLMVFVVLMGVGIDYNSFYLVKARDEFE FT RRSPKDALVVAAGTMDMLVIGLAVVLASTYGALMLSSTWGMREIGFALAAGVLLTATMA FT VYFIGPAFMSLFGEKAWWPLFKNHKEAKKE" FT gene 76393..77232 FT /locus_tag="TGAM_0081" FT /note="tg0081" FT CDS 76393..77232 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0081" FT /product="Radical SAM family protein" FT /db_xref="GOA:C5A2T1" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:C5A2T1" FT /inference="protein motif:CDD:COG1856, Uncharacterized FT homolog of biotin synthetase [Function unknown]" FT /inference="protein motif:COG:COG1856 Uncharacterized FT homolog of biotin synthetase; S Function unknown" FT /inference="protein motif:HMMPfam:PF04055 Radical_SAM FT InterPro:IPR007197 Radical SAM GO:Molecular FT Function:catalytic activity (GO:0003824), Molecular FT Function:iron ion binding (GO:0005506)" FT /inference="protein motif:HMMSmart:SM00729 no description FT InterPro:IPR006638 Elongator protein 3/MiaB/NifB" FT /protein_id="ACS32583.1" FT /translation="MEAEKKKLKIYIPGIKFPSVSLTGSYCALNCAHCGRHYLEGMKKP FT KKGELVDFCLNLERSGGLGCLLSGGMDSRLKVPIDKYADELRKIKRRTNLKINAHVGFI FT DESDLEWLKYVDVVSLDFVGDDDVIRRVYRIDKTVEDYLRIVELLTENEIRVAPHITIG FT LDFGRIHWEYRAIDLLMEYPIDVLVLDVLIPTKGTEMENVPKPGVEESLKVVKYARERF FT NGELSIGCMRPTGRWRLEFDRGAVLAGVDRLTNPPRKVIEWAKTVRDVEIIYECCVM" FT gene 77511..78509 FT /locus_tag="TGAM_0082" FT /note="tg0082" FT CDS 77511..78509 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0082" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2T2" FT /protein_id="ACS32584.1" FT /translation="MGMKKLLAVFGFFLIFLLLFGYFYLPSESMDELYKKIPEQVRENS FT QLIAAYYSSQTGFSGFREYQFAFYNPKERTLSIYTFKISKLLKVWPRMTEDKISCKTQL FT NYSVLATSPEKLKNFKNCDNCRVLLYTGRIYKNEEIENIYPSIEQVIKGKENTTYVKLS FT LLKDSEITTGTIIEVHGDMMFPTDDIYYGKGLLYLPSPMVNLTRGVVVEFLPVDNETIK FT RVIHYPDNVTLSDEFKITKYHRVNITPNMTWTPKEIPLKQILQKLNSLQHQKTIGKNTR FT VRFHIFKDSGEVYAWIRWIDKDKKIHAELRIYPPGSIDKRRFDYIYEYYCN" FT gene 78519..79496 FT /locus_tag="TGAM_0083" FT /note="tg0083" FT CDS 78519..79496 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0083" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2T3" FT /protein_id="ACS32585.1" FT /translation="MGMNIVKALFVFLFVFLLLLGGLAYTKHARNEELKNPKFVYEHYL FT KTYEAQNYTLLGVYFELDKGSIITPWKPKWEFYLYNPSGKLVKLTITPDGESKEELATI FT LHYTNLTTPVSQVQNLPKYEEGFREIVYLPKNGKLISHPARSYSEFRKVCVKLSRILDN FT GTFKLIRTVHGVNAVRNHEWLTLENTSLTGGILAFTTSNDPLCEGTWLVVEPYNETHDL FT VRVIYPHGNASALIKALNQPVFQGKDYLGLLKKIDESPCVDVESTLVNATGIYVNPHAQ FT EIFNQTAPKAIKERKCFTIIQVIVLKNGTVKTWARGTIWCARRD" FT gene 79543..80496 FT /locus_tag="TGAM_0084" FT /note="tg0084" FT CDS 79543..80496 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0084" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2T4" FT /protein_id="ACS32586.1" FT /translation="MKRLLLPFIIFVLVFGSLLAYDHRESSCFNSPTCVLERAGLDKEN FT LLLIYKDLAGWVAITYTDGTLREAQVTLKREFPTSKIVVNERAVKTEINYSPLVFSIRQ FT IPHFPQREQFLAIKVNGTVTVLKGEELEHVLRNTPKLEGILEKCNNCTLIFGDKSNRPG FT VDRNPLIGGYFVFPTEVKCGYSTWITVVKDDNSAGIIAVYPLMGAWWKLQTQKANTLYL FT GPSTPSHNLGQNVRRQGDPHKRIRSHCKPFPVQTVGGRKRLMSEGGQNHNLPQRNRRNP FT QVHEKMCPRAARQKLRRENETWKKMSMGTPAGGKES" FT gene complement(80493..81659) FT /locus_tag="TGAM_0085" FT /note="tg0085" FT CDS complement(80493..81659) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0085" FT /product="Metallopeptidase M20, ArgE/dapE family" FT /note="Possibly an acetylornithine deacetylase argE" FT /db_xref="GOA:C5A2T5" FT /db_xref="InterPro:IPR001261" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:C5A2T5" FT /inference="protein motif:CDD:ArgE, Acetylornithine FT deacetylase/Succinyl-diaminopimelate desuccinylase and FT related deacylases [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:Peptidase_M20, Peptidase FT family M20/M25/M40" FT /inference="protein motif:CDD:RocB, Arginine degradation FT protein (predicted deacylase) [Amino acid transport and FT metabolism]" FT /inference="protein motif:COG:COG0624 Acetylornithine FT deacetylase/Succinyl-diaminopimelate desuccinylase and FT related deacylases; E Amino acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.630.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11014 FT ARGE/DAPE/ACY1 FAMILY PROTEIN" FT /inference="protein motif:HMMPanther:PTHR11014:SF8 FT SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE-RELATED" FT /inference="protein motif:HMMPfam:PF01546 Peptidase_M20 FT InterPro:IPR002933 Peptidase M20 GO:Biological FT Process:proteolysis (GO:0006508), Molecular FT Function:metallopeptidase activity (GO:0008237)" FT /inference="protein motif:HMMPfam:PF07687 M20_dimer FT InterPro:IPR011650 Peptidase dimerisation GO:Molecular FT Function:hydrolase activity (GO:0016787), Molecular FT Function:protein dimerization activity (GO:0046983)" FT /inference="protein motif:ScanRegExp:PS00759 FT ARGE_DAPE_CPG2_2 InterPro:IPR001261 FT ArgE/dapE/ACY1/CPG2/yscS GO:Biological Process:proteolysis FT (GO:0006508), Molecular Function:metallopeptidase activity FT (GO:0008237)" FT /inference="protein motif:superfamily:SSF53187 Zn-dependent FT exopeptidases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32587.1" FT /translation="MGVMELELLKKLVSIPSRFGEEDKISNFIGSFLEEHGLSVEYQEV FT EGFGSNVISRIKGKRLTVVLNGHMDTVGLGSGWTRNPWGELDGDRFYGLGSADMKGGLA FT ALMAAFVEASYLPRRKRPTVLFTAVVDEEGYSRGAWKLIEENKVKDANLVLIAEPTGEN FT LMLGARGRYVIRLRVRGKKAHAARPENGINAIEEMSKLLAFLPRIKTKKHVRLGSGSYC FT TLYAHGEADGLSVPEEAEAIVDRHVVIGEDWERVVGELRKAAEKVGMRGELEISKFPRP FT TPEMLPYLVRENNRFVSMMSRIHSILWGRTPEKIYGKSVGDFNYFGTYLGVPTIVFGPI FT GGNWHGADEWVSVSSVERVKGTYLEFLRVLGSGKRLAELVEMKDYVPS" FT gene complement(81847..82899) FT /locus_tag="TGAM_0086" FT /note="tg0086" FT CDS complement(81847..82899) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0086" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="InterPro:IPR007562" FT /db_xref="UniProtKB/TrEMBL:C5A2T6" FT /inference="protein motif:CDD:COG1800, Predicted FT transglutaminase-like proteases [General function FT prediction only]" FT /inference="protein motif:CDD:DUF553, Protein of unknown FT function (DUF553)" FT /inference="protein motif:COG:COG1800 Predicted FT transglutaminase-like proteases; R General function FT prediction only" FT /inference="protein motif:HMMPfam:PF04473 DUF553 FT InterPro:IPR007562 Protein of unknown function DUF553" FT /inference="protein motif:ScanRegExp:PS00041 FT HTH_ARAC_FAMILY_1 InterPro:IPR000005 Helix-turn-helix, AraC FT type GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:superfamily:SSF54001 Cysteine FT proteinases" FT /protein_id="ACS32588.1" FT /translation="MFSMGAISKAMRLLSWVLVLLLLGVTLDVSLNDGALTKKYLPRPV FT LDEFEGLRERVASRAEDYLVTEAFERYLNDPNELSVLRNISVALKGEDAVSSAWNVLTW FT EDEHLNYDRNRTEPMFIPPSEFISRGRGICGDYALLTAGLLLVMNHSPVYVLSIEFNDS FT DVGHLTAAVSVNGRYLVADQHPPLMDLGAYYRHWALYVDDPAHISRATVYVLSWRGGRI FT VMERYSELSWRDFLAQDYNMSERDLKSMSEELVRSFELRYNVVPDPTLPRIADEGVSER FT YHWVSLWQGIFPGYADYYLPITRDEMVDYMLDQMGTQSELGKKLRESRAFWLELSKSGV FT NLTLTLYLAG" FT gene complement(82912..82989) FT /locus_tag="TGAM_r001" FT /note="tg_tRNA-Tyr" FT tRNA complement(82912..82989) FT /locus_tag="TGAM_r001" FT /product="tRNA-Tyr" FT /note="codon recognized: UAC" FT gene 83053..83637 FT /locus_tag="TGAM_0087" FT /note="tg0087" FT CDS 83053..83637 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0087" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR011011" FT /db_xref="UniProtKB/TrEMBL:C5A2T7" FT /inference="protein motif:Gene3D:G3D.3.90.490.10 no FT description" FT /inference="protein motif:superfamily:SSF57903 FYVE/PHD FT zinc finger InterPro:IPR011011 Zinc finger, FYVE/PHD-type FT GO:Molecular Function:zinc ion binding (GO:0008270)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32589.1" FT /translation="MRWEKMREPITVAVPLAKRMRDVMVTEKRLPGGDEVREFLRELGL FT EELYAGKGIALFRSGDVVALLFPRESLVVDVIPASGEVSDALEIIAYHDRKLNSLILEI FT LPANDLEYEGNIGLEPVIVNLETGELESNPVLGDFEEEKDGIYLVVDRETLERWKENGN FT IETCPLCGGELAWRGKKAVCLDCGYGVKVKD" FT gene 83671..83811 FT /locus_tag="TGAM_0088" FT /note="tg0088" FT CDS 83671..83811 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0088" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR005357" FT /db_xref="UniProtKB/TrEMBL:C5A2T8" FT /inference="protein motif:COG:COG1598 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF03681 UPF0150 FT InterPro:IPR005357 Protein of unknown function UPF0150 FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /protein_id="ACS32590.1" FT /translation="MIVKFEVYFDGEYWCAKGIDDDIFTQGKTLDELMENIREAVEVHF FT S" FT gene 83824..84393 FT /gene="fucA" FT /locus_tag="TGAM_0089" FT /note="tg0089" FT CDS 83824..84393 FT /codon_start=1 FT /transl_table=11 FT /gene="fucA" FT /locus_tag="TGAM_0089" FT /product="L-fuculose 1-phosphate aldolase (fucA)" FT /EC_number="4.1.2.17" FT /db_xref="GOA:C5A2T9" FT /db_xref="InterPro:IPR001303" FT /db_xref="UniProtKB/TrEMBL:C5A2T9" FT /inference="protein motif:CDD:Aldolase_II, Class II FT Aldolase and Adducin head (N-terminal) domain" FT /inference="protein motif:CDD:Aldolase_II, Class II FT Aldolase and Adducin N-terminal domain" FT /inference="protein motif:CDD:AraD, Ribulose-5-phosphate FT 4-epimerase and related epimerases and aldolases FT [Carbohydrate transport and metabolism]" FT /inference="protein motif:COG:COG0235 Ribulose-5-phosphate FT 4-epimerase and related epimerases and aldolases; G FT Carbohydrate transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.225.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10672 FT ADDUCIN-RELATED" FT /inference="protein motif:HMMPanther:PTHR10672:SF1 FT PENTULOSE-5-PHOSPHATE-4-EPIMERASE-RELATED" FT /inference="protein motif:HMMPfam:PF00596 Aldolase_II FT InterPro:IPR001303 Class II aldolase/adducin, N-terminal" FT /inference="protein motif:superfamily:SSF53639 AraD-like FT aldolase/epimerase InterPro:IPR001303 Class II FT aldolase/adducin, N-terminal" FT /protein_id="ACS32591.1" FT /translation="MSRIAKRQLVLYSRKAHERGLTAAFGGNLSVRVGNLVFIKATGAV FT MDEMTDEQVAVIDLSGNQLSDVRPSSEYRLHLAVYRVRPDVKAIAHLHPPYSIVASTLL FT KGELPIITPEAEIYLKRIPIAPFRPAGTEELAEVTAEALKEADAVLMAKHGIVTVGKSL FT REAFYKAELVEESAKLWYLRGNERKN" FT gene complement(84398..84649) FT /locus_tag="TGAM_0090" FT /note="tg0090" FT CDS complement(84398..84649) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0090" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR005354" FT /db_xref="InterPro:IPR023130" FT /db_xref="UniProtKB/TrEMBL:C5A2U0" FT /inference="protein motif:BlastProDom:PD029943 FT YG98_PYRAB_Q9UY10; InterPro:IPR005354 Protein of unknown FT function UPF0147 GO:Molecular Function:molecular function FT unknown (GO:0005554)" FT /inference="protein motif:CDD:UPF0147, Uncharacterized FT protein family (UPF0147)" FT /inference="protein motif:COG:COG1698 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF03685 UPF0147 FT InterPro:IPR005354 Protein of unknown function UPF0147 FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /protein_id="ACS32592.1" FT /translation="MSELIQQIVQVLKEQVVQDTVVPRNIRRAAEQAIEILLDESKEPA FT VRAADAIAILEEISEDPNMPMHTRTIIWEVLGALEQVK" FT gene 84837..85610 FT /locus_tag="TGAM_0091" FT /note="tg0091" FT CDS 84837..85610 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0091" FT /product="Amino acid ABC transporter, periplasmic amino FT acid-binding protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A2U1" FT /db_xref="InterPro:IPR001638" FT /db_xref="InterPro:IPR018313" FT /db_xref="UniProtKB/TrEMBL:C5A2U1" FT /inference="protein motif:CDD:HisJ, ABC-type amino acid FT transport/signal transduction systems, periplasmic FT component/domain [Amino acid transport and metabolism / FT Signal transduction mechanisms]" FT /inference="protein motif:CDD:PBPb, Bacterial periplasmic FT substrate-binding proteins; bacterial proteins, eukaryotic FT ones are in PBPe" FT /inference="protein motif:CDD:PBPb, Bacterial periplasmic FT transport systems use membrane-bound complexes and FT substrate-bound, membrane-associated, periplasmic binding FT proteins (PBPs) to transport a wide variety of substrates, FT such as, amino acids, peptides, sugars, vitamins and FT inorganic ions" FT /inference="protein motif:CDD:PBPe, Eukaryotic homologues FT of bacterial periplasmic substrate binding proteins" FT /inference="protein motif:CDD:SBP_bac_3, Bacterial FT extracellular solute-binding proteins, family 3" FT /inference="protein motif:COG:COG0477 Permeases of the FT major facilitator superfamily; G Carbohydrate transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.190.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR18966 GLUTAMATE FT RECEPTOR-RELATED" FT /inference="protein motif:HMMPanther:PTHR18966:SF32 FT GLUTAMATE RECEPTOR" FT /inference="protein motif:HMMPfam:PF00497 SBP_bac_3 FT InterPro:IPR001638 Bacterial extracellular solute-binding FT protein, family 3 GO:Molecular Function:transporter FT activity (GO:0005215), Biological Process:transport FT (GO:0006810), Cellular Component:periplasmic space (sensu FT Proteobacteria) (GO:0030288)" FT /inference="protein motif:HMMSmart:SM00062 no description FT InterPro:IPR001638 Bacterial extracellular solute-binding FT protein, family 3 GO:Molecular Function:transporter FT activity (GO:0005215), Biological Process:transport FT (GO:0006810), Cellular Component:periplasmic space (sensu FT Proteobacteria) (GO:0030288)" FT /inference="protein motif:HMMSmart:SM00079 no description FT InterPro:IPR001320 Ionotropic glutamate receptor FT GO:Molecular Function:ionotropic glutamate receptor FT activity (GO:0004970), Molecular Function:glutamate-gated FT ion channel activity (GO:0005234), Cellular FT Component:membrane (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50121 SBP_GLUR FT InterPro:IPR001311 Solute-binding protein/glutamate FT receptor GO:Molecular Function:transporter activity FT (GO:0005215), Biological Process:transport (GO:0006810)" FT /inference="protein motif:ScanRegExp:PS01039 FT SBP_BACTERIAL_3 InterPro:IPR001638 Bacterial extracellular FT solute-binding protein, family 3 GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular FT Component:periplasmic space (sensu Proteobacteria) FT (GO:0030288)" FT /inference="protein motif:superfamily:SSF53850 Periplasmic FT binding protein-like II" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32593.1" FT /translation="MVSTMDGKIIGGLLVLMLAAAVASSGCISGGSKEKVLVVGTSADF FT PPFEYKDPQTGNITGFDIELIKMVAKKAGYDKVEIKDMDFDSLIPALQTGKVDVVIAGM FT TITEKRKQVVDFSIPYWKADQAVVVRKDSSITVSSLDDLKGKVIGVEKGTTGAIYIKDN FT LGDQVTLKEYNSYVAALQALLNGQVDVLVIDSPVANMFTNKYDVKVVYTINTNEHYGIA FT VKKGNKELLDKINKALQDIMNSPDWNKLVEKYFGS" FT gene 85641..86330 FT /locus_tag="TGAM_0092" FT /note="tg0092" FT CDS 85641..86330 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0092" FT /product="Amino acid ABC transporter, permease protein" FT /note="Putative His/Glu/Gln/Arg/opine transporter; 3 FT probable transmembrane helices predicted by modhmm" FT /db_xref="GOA:C5A2U2" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:C5A2U2" FT /inference="protein motif:CDD:ArtM, ABC-type FT arginine/histidine transport system, permease component FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ArtQ, ABC-type arginine FT transport system, permease component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:BatB, ABC-type amino acid FT transport system, permease component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:HisM, ABC-type amino acid FT transport system, permease component [Amino acid transport FT and metabolism]" FT /inference="protein motif:COG:COG0765 ABC-type amino acid FT transport system, permease component; E Amino acid FT transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:HMMTigr:TIGR01726 FT HEQRo_perm_3TM:amino acid ABC transpo InterPro:IPR010065 FT Amino acid ABC transporter, permease protein, 3-TM region, FT His/Glu/Gln/Arg/opine GO:Molecular Function:transporter FT activity (GO:0005215), Biological Process:transport FT (GO:0006810), Cellular Component:cell wall (sensu FT Proteobacteria) (GO:0009276), Cellular Component:integral FT to membrane (GO:0016021)" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /protein_id="ACS32594.1" FT /translation="MITSTSVPLDIALRMLLNGAKTTIVLSVFSILLGLLIGLPVALME FT TYGGKTLRRVAMVYEGTLRGIPLLAIYFVIFYSMPMLIGLGLSPFLAAVVGLGIRSSAY FT QSQIFRSGIQAVDEGQIEAALSLGMSQWQIIRHIVLPQALRMSIPAWMNEYVIVLKDTS FT IALALGIVELTRQATYLVSITAEPFRYYGLAALFYLAMVLPLTYLANWMGKRYGIKGTG FT GAMDVRL" FT gene 86317..87081 FT /locus_tag="TGAM_0093" FT /note="tg0093" FT CDS 86317..87081 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0093" FT /product="ABC-type amino acid transport system, ATPase FT component" FT /db_xref="GOA:C5A2U3" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:C5A2U3" FT /inference="protein motif:BlastProDom:PD000006 FT Q8G544_BIFLO_Q8G544; InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:CDD:AbcC, ABC-type metal ion FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ABCC_ATM1_transporter, ATM1 FT is an ABC transporter that is expressed in the FT mitochondria" FT /inference="protein motif:CDD:ABCC_bacteriocin_exporters, FT ABC-type bacteriocin exporters" FT /inference="protein motif:CDD:ABCC_CFTR1, The CFTR FT subfamily domain 1" FT /inference="protein motif:CDD:ABCC_CFTR2, The CFTR FT subfamily domain 2" FT /inference="protein motif:CDD:ABCC_cytochrome_bd, The CYD FT subfamily implicated in cytochrome bd biogenesis" FT /inference="protein motif:CDD:ABCC_Glucan_exporter_like, FT Glucan exporter ATP-binding protein" FT /inference="protein motif:CDD:ABCC_Hemolysin, The FT ABC-transporter hemolysin B is a central component of the FT secretion machinery that translocates the toxin, hemolysin FT A, in a Sec-independent fashion across both membranes of E" FT /inference="protein motif:CDD:ABCC_MRP_domain1, Domain 1 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_domain2, Domain 2 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_Like, The MRP FT (Mutidrug Resistance Protein)-like transporters are FT involved in drug, peptide, and lipid export" FT /inference="protein motif:CDD:ABCC_MsbA, MsbA is an FT essential ABC transporter, closely related to eukaryotic FT MDR proteins" FT /inference="protein motif:CDD:ABCC_NFT1, Domain 2 of NFT1 FT (New full-length MRP-type transporter 1)" FT /inference="protein motif:CDD:ABCC_Protease_Secretion, This FT family represents the ABC component of the protease FT secretion system PrtD, a 60-kDa integral membrane protein FT sharing 37% identity with HlyB, the ABC component of the FT alpha-hemolysin secretion pathway, in the C-terminal FT domain" FT /inference="protein motif:CDD:ABCC_SUR1_N, The SUR domain FT 1" FT /inference="protein motif:CDD:ABCC_SUR2, The SUR domain 2" FT /inference="protein motif:CDD:ABCC_TAP, TAP, the FT Transporter Associated with Antigen Processing" FT /inference="protein motif:CDD:ABCF_EF-3, ABCF_EF-3 FT Elongation factor 3 (EF-3) is a cytosolic protein required FT by fungal ribosomes for in vitro protein synthesis and for FT in vivo growth" FT /inference="protein motif:CDD:ABCG_EPDR, ABCG transporters FT are involved in eye pigment (EP) precursor transport, FT regulation of lipid-trafficking mechanisms, and pleiotropic FT drug resistance (DR)" FT /inference="protein motif:CDD:ABCG_White, The White FT subfamily represents ABC transporters homologous to the FT Drosophila white gene, which acts as a dimeric importer for FT eye pigment precursors" FT /inference="protein motif:CDD:ABC_ATPase, ABC (ATP-binding FT cassette) transporter nucleotide-binding domain" FT /inference="protein motif:CDD:ABC_BcrA_bacitracin_resist, FT The BcrA subfamily represents ABC transporters involved in FT peptide antibiotic resistance" FT /inference="protein motif:CDD:ABC_Carb_Monos_I, This family FT represents the domain I of the carbohydrate uptake proteins FT that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Monos_II, This FT family represents domain II of the carbohydrate uptake FT proteins that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Solutes_like, ABC FT Carbohydrate and Solute Transporters-like subgroup" FT /inference="protein motif:CDD:ABC_CcmA_heme_exporter, CcmA, FT the ATP-binding component of the bacterial CcmAB FT transporter" FT /inference="protein motif:CDD:ABC_Class3, This class is FT comprised of all BPD (Binding Protein Dependent) systems FT that are largely represented in archaea and eubacteria and FT are primarily involved in scavenging solutes from the FT environment" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain1, FT Domain I of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain2, FT Domain II of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_CysA_sulfate_importer, FT Part of the ABC transporter complex cysAWTP involved in FT sulfate import" FT /inference="protein motif:CDD:ABC_DrrA, DrrA is the FT ATP-binding protein component of a bacterial exporter FT complex that confers resistance to the antibiotics FT daunorubicin and doxorubicin" FT /inference="protein motif:CDD:ABC_drug_resistance_like, FT ABC-type multidrug transport system, ATPase component" FT /inference="protein motif:CDD:ABC_DR_subfamily_A, This FT family of ATP-binding proteins belongs to a multisubunit FT transporter involved in drug resistance (BcrA and DrrA), FT nodulation, lipid transport, and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_FeS_Assembly, ABC-type FT transport system involved in Fe-S cluster assembly, ATPase FT component" FT /inference="protein motif:CDD:ABC_FtsE_transporter, FtsE is FT a hydrophilic nucleotide-binding protein that binds FtsX to FT form a heterodimeric ATP-binding cassette (ABC)-type FT transporter that associates with the bacterial inner FT membrane" FT /inference="protein motif:CDD:ABC_HisP_GlnQ_permeases, HisP FT and GlnQ are the ATP-binding components of the bacterial FT periplasmic histidine and glutamine permeases, repectively" FT /inference="protein FT motif:CDD:ABC_Iron-Siderophores_B12_Hemin, ABC FT transporters, involved in the uptake of siderophores, heme, FT and vitamin B12, are widely conserved in bacteria and FT archaea" FT /inference="protein motif:CDD:ABC_KpsT_Wzt, ABC_KpsT_Wzt FT The KpsT/Wzt ABC transporter subfamily is involved in FT extracellular polysaccharide export" FT /inference="protein motif:CDD:ABC_MalK_N, The N-terminal FT ATPase domain of the maltose transporter, MalK" FT /inference="protein motif:CDD:ABC_Metallic_Cations, ABC FT component of the metal-type transporters" FT /inference="protein FT motif:CDD:ABC_MetN_methionine_transporter, MetN (also known FT as YusC) is an ABC-type transporter encoded by metN of the FT metNPQ operon in Bacillus subtilis that is involved in FT methionine transport" FT /inference="protein motif:CDD:ABC_MJ0796_Lo1CDE_FtsE, This FT family is comprised of MJ0796 ATP-binding cassette, FT macrolide-specific ABC-type efflux carrier (MacAB), and FT proteins involved in cell division (FtsE), and release of FT liporoteins from the cytoplasmic membrane (LolCDE)" FT /inference="protein motif:CDD:ABC_Mj1267_LivG_branched, The FT Mj1267/LivG ABC transporter subfamily is involved in the FT transport of the hydrophobic amino acids leucine, FT isoleucine and valine" FT /inference="protein motif:CDD:ABC_ModC_like, Archeal FT protein closely related to ModC" FT /inference="protein FT motif:CDD:ABC_ModC_molybdenum_transporter, ModC is an FT ABC-type transporter and the ATPase component of a FT molybdate transport system that also includes the FT periplasmic binding protein ModA and the membrane protein FT ModB" FT /inference="protein motif:CDD:ABC_MTABC3_MDL1_MDL2, MTABC3 FT (also known as ABCB6) is a mitochondrial ATP-binding FT cassette protein involved in iron homeostasis and one of FT four ABC transporters expressed in the mitochondrial inner FT membrane, the other three being MDL1(ABC7), MDL2, and ATM1" FT /inference="protein motif:CDD:ABC_NatA_like, Similar in FT sequence to NatA, this is the ATPase component of a FT bacterial ABC-type Na+ transport system called NatAB, which FT catalyzes ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled to proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NatA_sodium_exporter, FT NatA is the ATPase component of a bacterial ABC-type Na+ FT transport system called NatAB, which catalyzes FT ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NikE_OppD_transporters, FT The ABC transporter subfamily specific for the transport of FT dipeptides, oligopeptides (OppD), and nickel (NikDE)" FT /inference="protein motif:CDD:ABC_NrtD_SsuB_transporters, FT NrtD and SsuB are the ATP-binding subunits of the bacterial FT ABC-type nitrate and sulfonate transport systems, FT respectively" FT /inference="protein motif:CDD:ABC_OpuCA_Osmoprotection, FT OpuCA is a the ATP binding component of a bacterial solute FT transporter that serves a protective role to cells growing FT in a hyperosmolar environment" FT /inference="protein motif:CDD:ABC_Org_Solvent_Resistant, FT ABC (ATP-binding cassette) transport system involved in FT resistant to organic solvents" FT /inference="protein motif:CDD:ABC_PDR_domain1, The FT pleiotropic drug resistance (PDR) family of ATP-binding FT cassette (ABC) transporters" FT /inference="protein motif:CDD:ABC_PDR_domain2, The FT pleiotropic drug resistance-like (PDR) family of FT ATP-binding cassette (ABC) transporters" FT /inference="protein motif:CDD:ABC_PhnC_transporter, FT ABC-type phosphate/phosphonate transport system" FT /inference="protein motif:CDD:ABC_PotA_N, PotA is an FT ABC-type transporter and the ATPase component of the FT spermidine/putrescine-preferential uptake system consisting FT of PotA, -B, -C, and -D" FT /inference="protein motif:CDD:ABC_Pro_Gly_Bertaine, This FT family comprises the glycine betaine/L-proline ATP binding FT subunit in bacteria and its equivalents in archaea" FT /inference="protein FT motif:CDD:ABC_PstB_phosphate_transporter, Phosphate uptake FT is of fundamental importance in the cell physiology of FT bacteria because phosphate is required as a nutrient" FT /inference="protein motif:CDD:ABC_putative_ATPase, This FT subfamily is involved in drug resistance, nodulation, lipid FT transport, and bacteriocin and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor, The ABC FT ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal FT biogenesis, formation of translation preinitiation FT complexes, and assembly of HIV capsids" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor_domain1, FT The ATPase domain 1 of RNase L inhibitor" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor_domain2, FT The ATPase domain 2 of RNase L inhibitor" FT /inference="protein motif:CDD:ABC_subfamily_A, The ABCA FT subfamily mediates the transport of a variety of lipid FT compounds" FT /inference="protein FT motif:CDD:ABC_ThiQ_thiamine_transporter, ABC-type thiamine FT tranport system" FT /inference="protein motif:CDD:ABC_TM1139_LivF_branched, FT LivF (TM1139) is part of the LIV-I bacterial ABC-type FT two-component transport system that imports neutral, FT branched-chain amino acids" FT /inference="protein motif:CDD:ABC_tran, ABC transporter" FT /inference="protein motif:CDD:ABC_UvrA, The excision repair FT protein UvrA" FT /inference="protein motif:CDD:ABC_YhbG, The ABC FT transporters belonging to the YhbG family are similar to FT members of the Mj1267_LivG family, which is involved in the FT transport of branched-chain amino acids" FT /inference="protein motif:CDD:AppF, ABC-type oligopeptide FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ArpD, ABC-type FT protease/lipase transport system, ATPase and permease FT components [General function prediction only]" FT /inference="protein motif:CDD:ArtP, ABC-type arginine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ATM1, ABC-type transport FT system involved in Fe-S cluster assembly, permease and FT ATPase components [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:BtuD, ABC-type cobalamin FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:CbiO, ABC-type cobalt FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:CcmA, ABC-type multidrug FT transport system, ATPase component [Defense mechanisms]" FT /inference="protein motif:CDD:CcmA, ABC-type transport FT system involved in cytochrome c biogenesis, ATPase FT component [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:CeuD, ABC-type enterochelin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG1123, ATPase components of FT various ABC-type transport systems, contain duplicated FT ATPase [General function prediction only]" FT /inference="protein motif:CDD:COG1245, Predicted ATPase, FT RNase L inhibitor (RLI) homolog [General function FT prediction only]" FT /inference="protein motif:CDD:COG2401, ABC-type ATPase FT fused to a predicted acetyltransferase domain [General FT function prediction only]" FT /inference="protein motif:CDD:COG3638, ABC-type FT phosphate/phosphonate transport system, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:COG3845, ABC-type FT uncharacterized transport systems, ATPase components FT [General function prediction only]" FT /inference="protein motif:CDD:COG4136, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4152, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4172, ABC-type FT uncharacterized transport system, duplicated ATPase FT component [General function prediction only]" FT /inference="protein motif:CDD:COG4178, ABC-type FT uncharacterized transport system, permease and ATPase FT components [General function prediction only]" FT /inference="protein motif:CDD:COG4181, Predicted ABC-type FT transport system involved in lysophospholipase L1 FT biosynthesis, ATPase component [Secondary metabolites FT biosynthesis, transport, and catabolism]" FT /inference="protein motif:CDD:COG4559, ABC-type hemin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG4586, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4619, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4674, Uncharacterized FT ABC-type transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:CydC, ABC-type transport FT system involved in cytochrome bd biosynthesis, fused ATPase FT and permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CydD, ABC-type transport FT system involved in cytochrome bd biosynthesis, ATPase and FT permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CysA, ABC-type FT sulfate/molybdate transport systems, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:DppD, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:DppF, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:FepC, ABC-type FT cobalamin/Fe3+-siderophores transport systems, ATPase FT components [Inorganic ion transport and metabolism / FT Coenzyme metabolism]" FT /inference="protein motif:CDD:FtsE, Predicted ATPase FT involved in cell division [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:GlnQ, ABC-type polar amino FT acid transport system, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:HisP, ABC-type histidine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:LivF, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:LivG, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:MalK, ABC-type sugar FT transport systems, ATPase components [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:CDD:MdlB, ABC-type multidrug FT transport system, ATPase and permease components [Defense FT mechanisms]" FT /inference="protein motif:CDD:MglA, ABC-type sugar FT transport system, ATPase component [Carbohydrate transport FT and metabolism]" FT /inference="protein motif:CDD:ModC, ABC-type molybdate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ModF, ABC-type molybdenum FT transport system, ATPase component/photorepair protein PhrA FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NatA, ABC-type Na+ transport FT system, ATPase component [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:OpuBA, ABC-type FT proline/glycine betaine transport systems, ATPase FT components [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:PhnL, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PotA, ABC-type FT spermidine/putrescine transport systems, ATPase components FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ProV, ABC-type FT proline/glycine betaine transport system, ATPase component FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PstB, ABC-type phosphate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PvdE, ABC-type siderophore FT export system, fused ATPase and permease components FT [Secondary metabolites biosynthesis, transport, and FT catabolism / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:SalX, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapD, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapF, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SufC, ABC-type transport FT system involved in Fe-S cluster assembly, ATPase component FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:SunT, ABC-type FT bacteriocin/lantibiotic exporters, contain an N-terminal FT double-glycine peptidase domain [Defense mechanisms]" FT /inference="protein motif:CDD:TagH, ABC-type FT polysaccharide/polyol phosphate transport system, ATPase FT component [Carbohydrate transport and metabolism / Cell FT envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:TauB, ABC-type FT nitrate/sulfonate/bicarbonate transport system, ATPase FT component [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:TauB, ABC-type taurine FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ThiQ, ABC-type thiamine FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:Ttg2A, ABC-type transport FT system involved in resistance to organic solvents, ATPase FT component [Secondary metabolites biosynthesis, transport, FT and catabolism]" FT /inference="protein motif:CDD:Uup, ATPase components of ABC FT transporters with duplicated ATPase domains [General FT function prediction only]" FT /inference="protein motif:CDD:YhbG, ABC-type (unclassified) FT transport system, ATPase component [General function FT prediction only]" FT /inference="protein motif:CDD:ZnuC, ABC-type Mn/Zn FT transport systems, ATPase component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG1126 ABC-type polar amino FT acid transport system, ATPase component; E Amino acid FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR19222 ATP-BINDING FT CASSETTE TRANSPORTER" FT /inference="protein motif:HMMPfam:PF00005 ABC_tran FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:ProfileScan:PS50100 DA_BOX FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ProfileScan:PS50101 ATP_GTP_A2" FT /inference="protein motif:ProfileScan:PS50893 FT ABC_TRANSPORTER_2 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ScanRegExp:PS00211 FT ABC_TRANSPORTER_1 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /protein_id="ACS32595.1" FT /translation="MSDSDRVLIIRNLTKRFGEKPVLKGISFEVERGETKVIIGPSGAG FT KSTLLRCINRLIEPDGGEIIFNGTNILERGVDIRKIRAKIGFVFQHFNLFKHLTALENV FT KIGLKVVRGMSDEEAEKKAIKALRMVHLEEDAFHKYPAQLSGGQQQRVAIARALAMEPE FT IILFDEPTSALDPQLAGEVLDVMRELAKKKVTMLVVTHEIGFALNAADEVLFFYDGVIW FT EKGKPEEILYNPKRKETREFLKRIADLSVGGP" FT gene 87078..87185 FT /locus_tag="TGAM_0094" FT /note="tg0094" FT CDS 87078..87185 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0094" FT /product="ABC-type amino acid transport system, permease FT component, N terminus fragment" FT /note="C terminal part is tg0095. Possibly a frameshift; 1 FT probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A2U4" FT /inference="protein motif:COG:COG0765 ABC-type amino acid FT transport system, permease component; E Amino acid FT transport and metabolism" FT /protein_id="ACS32596.1" FT /translation="MMVWETIARYLLHGLVVTLELTIVGFIGGFASGSS" FT gene 87188..87757 FT /locus_tag="TGAM_0095" FT /note="tg0095" FT CDS 87188..87757 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0095" FT /product="ABC-type amino acid transport system, permease FT component" FT /note="N terminus is i n tg0094. Possibly a frameshift; 2 FT probable transmembrane helices predicted by modhmm" FT /db_xref="GOA:C5A2U5" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR010065" FT /db_xref="UniProtKB/TrEMBL:C5A2U5" FT /inference="protein motif:CDD:ArtM, ABC-type FT arginine/histidine transport system, permease component FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ArtQ, ABC-type arginine FT transport system, permease component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:BatB, ABC-type amino acid FT transport system, permease component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:HisM, ABC-type amino acid FT transport system, permease component [Amino acid transport FT and metabolism]" FT /inference="protein motif:COG:COG0765 ABC-type amino acid FT transport system, permease component; E Amino acid FT transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:HMMTigr:TIGR01726 FT HEQRo_perm_3TM:amino acid ABC transpo InterPro:IPR010065 FT Amino acid ABC transporter, permease protein, 3-TM region, FT His/Glu/Gln/Arg/opine GO:Molecular Function:transporter FT activity (GO:0005215), Biological Process:transport FT (GO:0006810), Cellular Component:cell wall (sensu FT Proteobacteria) (GO:0009276), Cellular Component:integral FT to membrane (GO:0016021)" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /protein_id="ACS32597.1" FT /translation="MARTYGGRLSRALSATYIELIRGTPMLLQLYIIGFGLPLVIRDHF FT PNFVMDPTVAAALGMVINSAAYQAEYIRGAFNSIEYGQVEAALSLGMTKWEIIRHVIFP FT QAFRIMLPSWTNEMVYLLKYSSLAMLLAVPELMYEASVAASQTFLYAQIYLVVAGIYLV FT FATLIIGIMRKVELKLHIPGVTTIKR" FT gene complement(87761..88288) FT /gene="cobO" FT /locus_tag="TGAM_0096" FT /note="tg0096" FT CDS complement(87761..88288) FT /codon_start=1 FT /transl_table=11 FT /gene="cobO" FT /locus_tag="TGAM_0096" FT /product="Cob(I)yrinic acid a,c-diamide adenosyltransferase FT (cobO)" FT /EC_number="2.5.1.17" FT /db_xref="GOA:C5A2U6" FT /db_xref="InterPro:IPR003724" FT /db_xref="UniProtKB/TrEMBL:C5A2U6" FT /inference="protein motif:CDD:BtuR, ATP:corrinoid FT adenosyltransferase [Coenzyme metabolism]" FT /inference="protein motif:CDD:CobA_CobO_BtuR, ATP:corrinoid FT adenosyltransferase BtuR/CobO/CobP" FT /inference="protein motif:COG:COG2109 ATP:corrinoid FT adenosyltransferase; H Coenzyme transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPfam:PF02572 CobA_CobO_BtuR FT InterPro:IPR003724 ATP:corrinoid adenosyltransferase FT BtuR/CobO/CobP GO:Molecular Function:ATP binding FT (GO:0005524), Molecular Function:cob(I)yrinic acid FT a,c-diamide adenosyltransferase activity (GO:0008817), FT Biological Process:cobalamin biosynthesis (GO:0009236)" FT /inference="protein motif:HMMPIR:PIRSF015617 FT ATP:cob(I)alamin adenosyltransferase, CobA type FT InterPro:IPR003724 ATP:corrinoid adenosyltransferase FT BtuR/CobO/CobP GO:Molecular Function:ATP binding FT (GO:0005524), Molecular Function:cob(I)yrinic acid FT a,c-diamide adenosyltransferase activity (GO:0008817), FT Biological Process:cobalamin biosynthesis (GO:0009236)" FT /inference="protein motif:HMMTigr:TIGR00708 FT cobA:cob(I)alamin adenosyltransferase InterPro:IPR003724 FT ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FT GO:Molecular Function:ATP binding (GO:0005524), Molecular FT Function:cob(I)yrinic acid a,c-diamide adenosyltransferase FT activity (GO:0008817), Biological Process:cobalamin FT biosynthesis (GO:0009236)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32598.1" FT /translation="MTWKDKLGLVHIYTGNGKGKTTAAFGLAVRMLGSGGKVAIVQFMK FT APKAYGEQKKIEECGALIESFGLPKFVHGKPTEEDIEAAKRALARAKELASSGEWDLVI FT VDEVCVALGFNMLDVGEVRELIKSKAPHTELVLTGRYCPEELFELADYVTEMREIKHPY FT QRGVIARRGVEY" FT gene 88369..89196 FT /locus_tag="TGAM_0097" FT /note="tg0097" FT CDS 88369..89196 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0097" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF835 family; 3 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR008553" FT /db_xref="UniProtKB/TrEMBL:C5A2U7" FT /inference="protein motif:CDD:DUF835, Protein of unknown FT function (DUF835)" FT /inference="protein motif:HMMPfam:PF05763 DUF835 FT InterPro:IPR008553 Protein of unknown function DUF835" FT /protein_id="ACS32599.1" FT /translation="MVMIRSLWYFIRDLTVLILSLGIVFLLLSIGKNTKKNLGSRYFVL FT SFNVLVASFILVAIAEFIGVLLRTDVLWGNKLMMDVRSVILTLGAVLLFVSSIMVYLPF FT SRNEYTIVPIVTEPLNPSIYGAYWGDEKGASKAFVRLVKSLHLPAIVLSRDPPEVFRSK FT LGLKLVPVIWISKVSHEDAVDPRRLPYLLDRILNFLKSTETDKVVHIDCIEYLMLENGD FT EAMLKFVTKLKDLASLHRGIVIISIEKSAIDERTYHVLASELRPVEELEKMLG" FT gene complement(90310..90386) FT /locus_tag="TGAM_r002" FT /note="tg_tRNA-His" FT tRNA complement(90310..90386) FT /locus_tag="TGAM_r002" FT /product="tRNA-His" FT /note="codon recognized: CAC" FT gene 90529..91158 FT /locus_tag="TGAM_0098" FT /note="tg0098" FT CDS 90529..91158 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0098" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF207 family" FT /db_xref="InterPro:IPR003827" FT /db_xref="InterPro:IPR022908" FT /db_xref="UniProtKB/TrEMBL:C5A2U8" FT /inference="protein motif:CDD:COG1590, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:DUF207, Uncharacterized ACR, FT COG1590" FT /inference="protein motif:COG:COG1590 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPanther:PTHR18052 FT UNCHARACTERIZED InterPro:IPR003827 Protein of unknown FT function DUF207" FT /inference="protein motif:HMMPanther:PTHR18052:SF6 FT UNCHARACTERIZED" FT /inference="protein motif:HMMPfam:PF02676 DUF207 FT InterPro:IPR003827 Protein of unknown function DUF207" FT /protein_id="ACS32600.1" FT /translation="MKAKREALVSLFTAMREGKVDEDIIDLLLLINSIRGIYTTSSCSG FT RIGIIEEPALGAKPLSRWLIKVHREMEFEEAKRALEKAREGLIFLKSQPPIFHVVAEDL FT ERAKKLHELGLASGFKYTTFKVISNRYLVEINATEYLTAPLGRDGEILVSDDYLHFAIE FT IGNSMLRRSKGRLPRLMKNFEKLREELGEDELFYELAEEFGIESAV" FT gene complement(91253..91495) FT /locus_tag="TGAM_0099" FT /note="tg0099" FT CDS complement(91253..91495) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0099" FT /product="Conserved hypothetical protein, N-term fragment" FT /note="C terminus is in tg0100" FT /db_xref="InterPro:IPR002716" FT /db_xref="UniProtKB/TrEMBL:C5A2U9" FT /inference="protein motif:CDD:VapC, Predicted nucleic FT acid-binding protein, contains PIN domain [General function FT prediction only]" FT /inference="protein motif:HMMPfam:PF01850 PIN FT InterPro:IPR002716 PilT protein, N-terminal" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /protein_id="ACS32601.1" FT /translation="MEVLKRLEKLFKVEPLDNVIILTASKIYRHLKRKGELIDDADILI FT GATAIAKGYTVWTTNIDHFERMRDFGVKLYKPRKR" FT gene complement(91517..91741) FT /locus_tag="TGAM_0100" FT /note="tg0100" FT CDS complement(91517..91741) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0100" FT /product="Conserved hypothetical protein, C-term fragment" FT /note="N terminus is in tg0099" FT /db_xref="UniProtKB/TrEMBL:C5A2V0" FT /protein_id="ACS32602.1" FT /translation="MRLRLRRRRASCMNFFRRRSSMKSKGKSQRRGSRSGTSGILIDTS FT VLIDLYHDRKLEEYSGSAISIITLFEFVR" FT gene complement(91805..92026) FT /locus_tag="TGAM_0101" FT /note="tg0101" FT CDS complement(91805..92026) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0101" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A2V1" FT /protein_id="ACS32603.1" FT /translation="MAGVRVLYLGENKKRGSFMGATRSEIVVEVPKGMSVSEIRKMVRE FT IVLRYLREKGASEEELKKVRVRVEVLEE" FT gene complement(92210..93073) FT /locus_tag="TGAM_0102" FT /note="tg0102" FT CDS complement(92210..93073) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0102" FT /product="lplA-like lipoate-protein ligase A related" FT /db_xref="GOA:C5A2V2" FT /db_xref="InterPro:IPR004143" FT /db_xref="UniProtKB/TrEMBL:C5A2V2" FT /inference="protein motif:CDD:BPL_LipA_LipB, Biotin/lipoate FT A/B protein ligase family" FT /inference="protein motif:CDD:LplA, Lipoate-protein ligase FT A [Coenzyme metabolism]" FT /inference="protein motif:COG:COG0095 Lipoate-protein FT ligase A; H Coenzyme transport and metabolism" FT /inference="protein motif:HMMPanther:PTHR12561 LIPOATE FT PROTEIN LIGASE" FT /inference="protein motif:HMMPanther:PTHR12561:SF1 LIPOATE FT PROTEIN LIGASE" FT /inference="protein motif:HMMPfam:PF03099 BPL_LipA_LipB FT InterPro:IPR004143 Biotin/lipoate A/B protein ligase FT GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:protein modification (GO:0006464)" FT /inference="protein motif:superfamily:SSF55681 Class II FT aaRS and biotin synthetases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32604.1" FT /translation="MCKQRLLRGDRSHHPSGGLSLIIAGLKNPPSLLTLVVAMRFIPLI FT VARPEVQMAIDEAIMIARIEGKVPDTVRLYAFSPSSVTIGRFQSVVHDVNLEEAKKLNI FT PVVRRITGGGSVFHDEFGEITYSVVVGENFHPALKNVETSYRYLAGPLVDALGDLGLNA FT GFSGLNDIVANGKKISGSAQTRRKGVILQHGTFMYATRVDVLGRVLRVSKAKLADKGVS FT SIWERVTTLEREGIKLNRWEAYELLKESFFRAFELEEGELTDYELELAEELIEKRYGNP FT EWNEMK" FT gene complement(93657..94073) FT /locus_tag="TGAM_0103" FT /note="tg0103" FT CDS complement(93657..94073) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0103" FT /product="Signal peptidase, peptidase S26B" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A2V3" FT /db_xref="InterPro:IPR001733" FT /db_xref="InterPro:IPR011056" FT /db_xref="InterPro:IPR015927" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/TrEMBL:C5A2V3" FT /inference="protein motif:COG:COG0681 Signal peptidase I; U FT Intracellular trafficking, secretion, and vesicular FT transport" FT /inference="protein motif:FPrintScan:PR00728 SIGNALPTASE FT InterPro:IPR001733 Peptidase S26B, eukaryotic signal FT peptidase GO:Biological Process:signal peptide processing FT (GO:0006465), Biological Process:proteolysis (GO:0006508), FT Molecular Function:peptidase activity (GO:0008233), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:Gene3D:G3D.2.10.109.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10806 MICROSOMAL FT SIGNAL PEPTIDASE SUBUNIT InterPro:IPR001733 Peptidase S26B, FT eukaryotic signal peptidase GO:Biological Process:signal FT peptide processing (GO:0006465), Biological FT Process:proteolysis (GO:0006508), Molecular FT Function:peptidase activity (GO:0008233), Cellular FT Component:membrane (GO:0016020)" FT /inference="protein motif:HMMPanther:PTHR10806:SF3 SIGNAL FT SEQUENCE PROCESSING PROTEIN SEC11" FT /inference="protein motif:HMMPfam:PF00717 Peptidase_S24 FT InterPro:IPR006198 Peptidase S24, S26A and S26B FT GO:Biological Process:proteolysis (GO:0006508), Molecular FT Function:serine-type peptidase activity (GO:0008236)" FT /inference="protein motif:HMMTigr:TIGR02228 FT sigpep_I_arch:signal peptidase I InterPro:IPR001733 FT Peptidase S26B, eukaryotic signal peptidase GO:Biological FT Process:signal peptide processing (GO:0006465), Biological FT Process:proteolysis (GO:0006508), Molecular FT Function:peptidase activity (GO:0008233), Cellular FT Component:membrane (GO:0016020)" FT /inference="protein motif:superfamily:SSF51306 LexA/Signal FT peptidase InterPro:IPR011056 Peptidase S24 and S26, FT C-terminal region" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32605.1" FT /translation="MAGINYGLKIVMHTDSPLVIVISGSMEPVFYRGDVVLLRSVPPSD FT IHVGDVIVYNAPMYSYPIIHRVREIKTVNLGGKVERCFVTWGDNNPVPDWGEYRLYPTP FT YGGVPCVPAYAVDAKAVMVFPKIGLIPLWIREHL" FT gene complement(94100..94651) FT /locus_tag="TGAM_0104" FT /note="tg0104" FT CDS complement(94100..94651) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0104" FT /product="Conserved archaeal hypothetical protein" FT /db_xref="InterPro:IPR007501" FT /db_xref="UniProtKB/TrEMBL:C5A2V4" FT /inference="protein motif:CDD:DUF531, Protein of unknown FT function (DUF531)" FT /inference="protein motif:COG:COG1772 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF04407 DUF531 FT InterPro:IPR007501 Protein of unknown function DUF531" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32606.1" FT /translation="MLTLALYNTYDTRKLHEAHLRAIARAGPIAYAFGFHLALVGFPLR FT GRPLDVAEEVSSHTTIGEGGTYLLELARRNRFHLLDFPRKGFPPQFGTVVATTRKPSDE FT KEISPLELAERALRGESFIFLVGLGRHGLPGEIFKLARHHMDITGKRISLETCTAIGAI FT PAKIRTLMEALKWMKAGKRT" FT gene 94624..95811 FT /locus_tag="TGAM_0105" FT /note="tg0105" FT CDS 94624..95811 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0105" FT /product="TRP-repeat-containing protein" FT /db_xref="GOA:C5A2V5" FT /db_xref="InterPro:IPR011990" FT /db_xref="UniProtKB/TrEMBL:C5A2V5" FT /inference="protein motif:COG:COG0457 FOG:TPR repeat; R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.1.25.40.10 no FT description InterPro:IPR011990 Tetratricopeptide-like FT helical GO:Molecular Function:binding (GO:0005488)" FT /inference="protein motif:superfamily:SSF48452 TPR-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32607.1" FT /translation="MCCTGRESASHHHAEFPRTLINCCGVYKTRVMSMSSYDDILVLAS FT KGLFEEAIKAAGEIEDPFEWADALLEIAFRAKDVRRDLVPLLLEEIRRTLKKIKDPGDR FT AYIYSKLARFHAVTGNGDEATEVFDRAAEEIARIKDEGERAIAMAVLAQNLALTGLTEE FT AIETFNEAFDAAISAEMDYRTKLDVITEIAGLIENAGDSLDSREAIRFYEMAYDIFDKL FT RISHRAADVEKKLKMARTLYYHGPPEVRAALLEGRYNYSLKLIEKLYKDPQERFIAMLE FT MASWLKQIGAPEYLDVLEGAFKLLERIGLSETNVQRAAAILSGMGELEKALRFAVEIKD FT PEKRDDALAAISLKLAERKDFLEAREVAKLIGNSMLKARLLEEIAKIEEESRWEI" FT gene 95808..96746 FT /gene="mdp" FT /locus_tag="TGAM_0106" FT /note="tg0106" FT CDS 95808..96746 FT /codon_start=1 FT /transl_table=11 FT /gene="mdp" FT /locus_tag="TGAM_0106" FT /product="Membrane dipeptidase (mdp)" FT /EC_number="3.4.13.19" FT /db_xref="GOA:C5A2V6" FT /db_xref="InterPro:IPR008257" FT /db_xref="UniProtKB/TrEMBL:C5A2V6" FT /inference="protein motif:CDD:COG2355, Zn-dependent FT dipeptidase, microsomal dipeptidase homolog [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:rDP_like, renal dipeptidase FT (rDP), best studied in mammals and also called membrane or FT microsomal dipeptidase, is a membrane-bound glycoprotein FT hydrolyzing dipeptides and is involved in hydrolytic FT metabolism of penem and carbapenem beta-lactam antibiotics" FT /inference="protein motif:CDD:Renal_dipeptase, Renal FT dipeptidase" FT /inference="protein motif:COG:COG2355 Zn-dependent FT dipeptidase, microsomal dipeptidase homolog; E Amino acid FT transport and metabolism" FT /inference="protein motif:HMMPanther:PTHR10443 DIPEPTIDASE FT InterPro:IPR008257 Peptidase M19, renal dipeptidase FT GO:Molecular Function:membrane dipeptidase activity FT (GO:0004237), Biological Process:proteolysis (GO:0006508), FT Molecular Function:dipeptidyl-peptidase activity FT (GO:0008239)" FT /inference="protein motif:HMMPanther:PTHR10443:SF1 FT DIPEPTIDASE" FT /inference="protein motif:HMMPfam:PF01244 Peptidase_M19 FT InterPro:IPR008257 Peptidase M19, renal dipeptidase FT GO:Molecular Function:membrane dipeptidase activity FT (GO:0004237), Biological Process:proteolysis (GO:0006508), FT Molecular Function:dipeptidyl-peptidase activity FT (GO:0008239)" FT /inference="protein motif:HMMPIR:PIRSF001124 Membrane FT dipeptidase InterPro:IPR008257 Peptidase M19, renal FT dipeptidase GO:Molecular Function:membrane dipeptidase FT activity (GO:0004237), Biological Process:proteolysis FT (GO:0006508), Molecular Function:dipeptidyl-peptidase FT activity (GO:0008239)" FT /inference="protein motif:superfamily:SSF51556 FT Metallo-dependent hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32608.1" FT /translation="MIGVFDAHSDLPTLVWKERGKGKTRVLESRFEEFFGDYVKARVMA FT VWTPVDKRPIALRYGLEAVMRLKKDVAESSRLEMVTSVEGMERAIKEGRVALWLGMEGG FT EPLESLDVLEVFYSLGLRVLTLTWSLRNQIGDGVFERTNGGLTNFGAEVVGKAEELGIL FT LDLSHINEAGFWDTLDLTSFPVIASHSNARKLCDNPRNLNDEQLKAIAERNGVVGAVAI FT PSFVDEKDPTLERYVEHIIYMVDLIGYRSVGLGFDFVYYLEGWSGKAVKGLENEAGIPL FT LLESLGERLSEKEVKAIAYGNFKRVFEEVIG" FT gene 96753..97889 FT /locus_tag="TGAM_0107" FT /note="tg0107" FT CDS 96753..97889 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0107" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF257 family" FT /db_xref="InterPro:IPR005489" FT /db_xref="UniProtKB/TrEMBL:C5A2V7" FT /inference="protein motif:HMMPfam:PF03192 DUF257 FT InterPro:IPR005489 Protein of unknown function DUF257" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32609.1" FT /translation="MMIDELLGEMKIGEMVLVEYEPISSPEVVFHRIVDHFLKEDVPIL FT VVDVLDTLHTFNEHLKRRGIRLPVDRLTVVKEGGRVRLGNIIGEVFIPSEPSEFTYHQV FT QYSKTVKPFFERDEKPKAIIVLGMEKFILPFQNDLRKVEMYFEMIERPPIAPGGKYTFL FT FINRSVASEYVLRNLESEKHYVVELTGEAKVTKTPFSLLQVGRGLSLIEYGSKDHPELV FT LGAALDEFGAENVLVVDVVDTGMVVGKHLEAMEWDVEELPRVVKIGGRFEWGRTIATLD FT IYNEPAVFLRKLDGILQRESPGLILYFGMERIPRFHRDSARITLTITNRAAVELSVPYS FT AVYLINRDTSSPELRGLLEETAETVLMFHDGGFKKLKG" FT gene complement(97886..98596) FT /locus_tag="TGAM_0108" FT /note="tg0108" FT CDS complement(97886..98596) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0108" FT /product="RecA family AAA ATPase" FT /note="Contains 1 P_Loop (SSF52540) domain and 2 RecA FT (PR00142) domains" FT /db_xref="GOA:C5A2Z8" FT /db_xref="InterPro:IPR010624" FT /db_xref="InterPro:IPR014774" FT /db_xref="UniProtKB/TrEMBL:C5A2Z8" FT /inference="protein motif:CDD:KaiC, KaiC is a circadian FT clock protein primarily found in cyanobacteria KaiC is a FT RecA-like ATPase, having both Walker A and Walker B motifs" FT /inference="protein motif:CDD:RAD55, RecA-superfamily FT ATPases implicated in signal transduction [Signal FT transduction mechanisms]" FT /inference="protein motif:COG:COG0467 RecA-superfamily FT ATPases implicated in signal transduction; T Signal FT transduction mechanisms" FT /inference="protein motif:FPrintScan:PR00142 RECA FT InterPro:IPR001553 RecA bacterial DNA recombination FT GO:Molecular Function:DNA binding (GO:0003677), Molecular FT Function:ATP binding (GO:0005524), Biological Process:DNA FT metabolism (GO:0006259), Molecular Function:DNA-dependent FT ATPase activity (GO:0008094)" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR13682 GLUTAMINE FT SYNTHETASE/DNA REPAIR PROTEIN-RELATED" FT /inference="protein motif:HMMPanther:PTHR13682:SF11 DNA FT REPAIR PROTEIN RAD51 [ARCHAEA]" FT /inference="protein motif:HMMPfam:PF06745 KaiC FT InterPro:IPR010624 Circadian clock protein KaiC" FT /inference="protein motif:ProfileScan:PS51146 KAIC FT InterPro:IPR010624 Circadian clock protein KaiC" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32610.1" FT /translation="MSTLQDRISTGIPGLDELIEGGLIPGKVYLITGPPGSGKTTMGMH FT FLIEGARKNEKVAYVSLIQDPHEAVKDMMRFDPSVQVYAGTKRLLLFDLGPVLWRESAH FT VPTWRSVLLRIREIAEDEKISRLVIDPLTAIEFSMENPAEKKAELARFVRGLEDLGVTT FT YLIAEMTDLNRYTEEHYLVSGVIMLHYFLLEKKMVRAIQILKMRRTKHETGLFRMEFTQ FT RGLVVRKGSPFEAV" FT gene 98667..99512 FT /locus_tag="TGAM_0109" FT /note="tg0109" FT CDS 98667..99512 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0109" FT /product="SAM-dependent methyltransferase" FT /db_xref="GOA:C5A2Z9" FT /db_xref="UniProtKB/TrEMBL:C5A2Z9" FT /inference="protein motif:CDD:COG1092, Predicted FT SAM-dependent methyltransferases [General function FT prediction only]" FT /inference="protein motif:CDD:COG2521, Predicted archaeal FT methyltransferase [General function prediction only]" FT /inference="protein motif:CDD:COG4262, Predicted spermidine FT synthase with an N-terminal membrane domain [General FT function prediction only]" FT /inference="protein motif:COG:COG2521 Predicted archaeal FT methyltransferase; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR11558 SPERMIDINE FT SYNTHASE InterPro:IPR001045 Spermine synthase GO:Molecular FT Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMPanther:PTHR11558:SF2 FT SPERMIDINE SYNTHASE" FT /inference="protein motif:HMMPfam:PF08241 Methyltransf_11 FT InterPro:IPR013216 Methyltransferase type 11" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /protein_id="ACS32611.1" FT /translation="MEDVYYLTSREARLLLASRGPVKINLDLRKTGRRWEITRDGDEFV FT FPDGTRVSREIMERIARDTENVYFIRKGVYKAAIAGEHFYKLVPTIPPTIEINGIRMHR FT TKGTNPLQDTRSKVNAVKPREGETVLDTCMGLGYTAIEASKRGAYVITIEKDPNVIELA FT RINPWSRELFTGGKIQVIQGDAFEVVKRFNDETFDVIIHDPPRFSLAGQLYSEEFYREL FT FRILKPGGRLFHYVGNPGKRYRRKDLQKGVMERLRRAGFVEVKRVEEALGVVAKKPGKK FT " FT gene complement(99520..100923) FT /locus_tag="TGAM_0110" FT /note="tg0110" FT CDS complement(99520..100923) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0110" FT /product="Nucleic acid-binding protein, putative" FT /note="Contains 1 OB-fold domain (IPR008994); 5 probable FT transmembrane helices predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A300" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32612.1" FT /translation="MRGFTHYISGLAAATFFPSLVSDLRMGILLPVIAAAAAYFPDFVD FT FKFGKFFARRDYEIDPAPWDEKKHYAPKLVKIKELSEKNRYQFFAIEGRVEEILTRGSG FT TVTYTILDEKGEQKTVEEEYNSIVFILNDGTGRITVEAVGDDYKFFEEEFGQIEEGKEI FT LVFGYVDIDEVDKELRFVVSDAPHPQGIAETIAKAIEEAYHEGERIVKIHNIRLPGDVY FT RQFFVYLDPPKREVRVEMGPIVTPGGVAITDKPPEYRRYGIAKVSVPFIKTYPKPTRID FT SFSGPEIAFRRAEFRGKTVVKDRFLPWHHGFSHSLTMGIIIGAFVYAIFKLLGYNHAGD FT LALASMIGQWLHVFEDQLGFMGSNLLPPITKDVIPGFKLGESGSGLTNFSTAWLMISFM FT IWNFNRFTEPRPIPIGDAKLLLLLIWPSIIGFGIAIVRSFKLRKEIAQLMDYYTNLEAF FT EELEEVGGI" FT gene complement(100930..102261) FT /locus_tag="TGAM_0111" FT /note="tg0111" FT CDS complement(100930..102261) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0111" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF112 family; 11 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR002823" FT /db_xref="UniProtKB/TrEMBL:C5A301" FT /inference="protein motif:CDD:COG1784, Predicted membrane FT protein [Function unknown]" FT /inference="protein motif:CDD:DUF112, Integral membrane FT protein DUF112" FT /inference="protein motif:COG:COG1784 Predicted membrane FT protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01970 DUF112 FT InterPro:IPR002823 Protein of unknown function DUF112, FT transmembrane" FT /protein_id="ACS32613.1" FT /translation="MMPMVPLSEVLVWSLAGVLFGSLISWIPGFHIFNIMALLVAVFGV FT GELMPVQAFPFFAIGAIVAYAYVSAISSVYFSVADESAVFLLFPTQRYLLLGRGHEAVL FT LYLIGAVAGTLVLVLGALFIFPKVLPPIYQATSPYITYFLTAIVVFMFMSEWPKEGDRG FT KTPLQRLWLAWRQILGGILVFFLSGLLGFAVMNTNLLPSTSAYTRLTPMFIGFFGMSWV FT LLNILSNPPMLPQKIDDKVESSIYNTLKASFGGALGGTIAAVYPIITGGMGALIAGHIT FT SQRGDDAFIISQGVNRVIYYVGAFTLLFLPNLRLTRGAAAWLVSSVYTPKSYAEYLAAI FT GVILLSAGISFLFTYYLSKLIARSFTVVHIRKLSYVVAVVLIAISYVLTGPMGVLVLFV FT STAIGMMAAAFNTRRSYCLGGLVLPVLISMTGHTGEVMRLLGLG" FT gene complement(102263..104212) FT /locus_tag="TGAM_0112" FT /note="tg0112" FT CDS complement(102263..104212) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0112" FT /product="Nucleic acid binding protein, containing 3 FT OB-fold domains" FT /note="Duplication with tg0113; 1 probable transmembrane FT helix predicted by modhmm" FT /db_xref="GOA:C5A302" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:C5A302" FT /inference="protein motif:Gene3D:G3D.2.40.50.140 no FT description InterPro:IPR012340 Nucleic acid-binding, FT OB-fold, subgroup" FT /inference="protein motif:HMMPfam:PF01336 tRNA_anti FT InterPro:IPR004365 nucleic acid binding, OB-fold, FT tRNA/helicase-type GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /inference="protein motif:superfamily:SSF50249 FT InterPro:IPR008994 Nucleic acid-binding, OB-fold FT GO:Molecular Function:nucleic acid binding (GO:0003676)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32614.1" FT /translation="MTSNGSNGNPDSRKEEKKLYYHGLKEQKKIDVSKLKYVSLVIAVL FT GVALILIAAQSAKAPMAKISDVYGNYLMNYAVVRVEGNVVSVPYVSESGGKLSVTFSVN FT DGTGSIDIRVYSPVAEKLIKEGKVPFPGDRIEAEIQLRVRETYTYGMLQYLDGLKFISK FT AYSPNPPKVTTLTEKMANEYVYTEGLVTSLNNVSSGILMEVDTGSGRVTVLIPKVLLVI FT GKAPKVALGDQVKVAGVVYLYKGSSPEIVVRDLKDFTVVGAQQVPQVSLDELRDHVGET FT VSVEATLEKITYKSGQYLVTVSDGDVSAVLYTSRDVLAAINPFQAGSGSRIKAIGLVGD FT NGTLKVSKFEVISPVKPELSRIGDLSSEMLGRIVVIEGNIVSTANVGSNLKLVVNDGTG FT EITIFIPGSVVRELDENVKGQLKAGLGVKVAGYLDEYRGTLEVIPYTPEAIIAYRKPIG FT GTTETTTTPSPGQGGNGTITLSQLPSASGTVKLEVKWEAVYYSKPNYLIEVSDDTGRVN FT LTVSRDLIPNPLKTGTGSELEITYDADKDRVVSIEVVKAVASPLLETGEVSSDMLGKTV FT VVQGTVKSIYTGSSFVKLTIDDGSGELVIFIPKSVLGDRTFNEGDIVKIGGYVTEYRGT FT LEVVPYRGDAIVKE" FT gene complement(104319..105731) FT /locus_tag="TGAM_0113" FT /note="tg0113" FT CDS complement(104319..105731) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0113" FT /product="Nucleic acid binding protein, containing 3 FT OB-fold domains" FT /note="Duplication with tg0112 C-terminus; 1 probable FT transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A303" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:C5A303" FT /inference="protein motif:Gene3D:G3D.2.40.50.140 no FT description InterPro:IPR012340 Nucleic acid-binding, FT OB-fold, subgroup" FT /inference="protein motif:HMMPfam:PF01336 tRNA_anti FT InterPro:IPR004365 nucleic acid binding, OB-fold, FT tRNA/helicase-type GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32615.1" FT /translation="MRVKFALALLLIGLVVISAGCIGGGSKESTPTTSSTTSSQTQTTT FT SAAQTTTTTTTTTTSPQTTTTSTPSIPKVSIGEIGNYVGKNVSVEGLLLGISYDSANHV FT YVISMGENGAKINVTAKRGLLSVLNPLEVGVGSKILVTGEVESQEQLSAGEIEVVEKKA FT PTTSEIKDISSGMLGKIVVIEGNVVSTKKIGSNLKLTVTDGTGEIVVFIPGSVVKELSN FT ETLSGLKGGLGVKIGGYVDEYRGTLEVIPYIPEAIIAYGEPLQIETTTTTTTTTTTTTS FT TQTQTEVQWVTVSELSSASGTVQLNATWVKLYYSKPNYLIEVSDDTGRVNLTAEREILP FT NPIKVGTGSVLHLVVDASSMKVLNLSAVSPQPSPLLSTANVTAELLGKTVVVQGTVSDF FT KTIGANLKFLVVDGSGNITVFVPSSVASKLPEDVKSRLQDGASVEIGGYVTEYKGTIEI FT IPYSVEGIEILT" FT gene complement(105802..107673) FT /locus_tag="TGAM_0114" FT /note="tg0114" FT CDS complement(105802..107673) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0114" FT /product="Peptidase, prolyl oligopeptidase family" FT /db_xref="GOA:C5A304" FT /db_xref="InterPro:IPR001375" FT /db_xref="InterPro:IPR011042" FT /db_xref="UniProtKB/TrEMBL:C5A304" FT /inference="protein motif:CDD:COG1505, Serine proteases of FT the peptidase family S9A [Amino acid transport and FT metabolism]" FT /inference="protein motif:CDD:DAP2, Dipeptidyl FT aminopeptidases/acylaminoacyl-peptidases [Amino acid FT transport and metabolism]" FT /inference="protein motif:COG:COG1506 Dipeptidyl FT aminopeptidases/acylaminoacyl-peptidases; E Amino acid FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.2.140.10.20 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.1820 no FT description" FT /inference="protein motif:HMMPanther:PTHR11731 DIPEPTIDYL FT PEPTIDASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11731:SF5 FT ACYLAMINO-ACID-RELEASING ENZYME" FT /inference="protein motif:HMMPfam:PF00326 Peptidase_S9 FT InterPro:IPR001375 Peptidase S9, prolyl oligopeptidase FT active site region GO:Biological Process:proteolysis FT (GO:0006508), Molecular Function:serine-type peptidase FT activity (GO:0008236)" FT /inference="protein motif:ProfileScan:PS50187 ESTERASE FT InterPro:IPR000379 Esterase/lipase/thioesterase FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:superfamily:SSF50960 TolB, FT C-terminal domain InterPro:IPR011042 TolB, C-terminal" FT /inference="protein motif:superfamily:SSF53474 FT alpha/beta-Hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32616.1" FT /translation="MSGIEWNEKTFSRFAYVNDPRIKGSRIAYTLTKVNMKDNKYESTV FT VVEDIGKGSRRFIENASMPRLSPDGRKIAFTRPNEEKKETEVWVAELETLSAKKVLSAK FT NIRSLQWNDDSRRLLVVGFKRHDDEDFVFDDDVPFWFDGMGFLDGEKTTFWVLDTESEE FT IIEEFEKPRFSSGLWHGDSIVINVPHRENGKPALFKFYDIILWKDGNEEKLFERVSFEA FT VDSDGKAILLRGRREKKFISEHDWLYLWDGELKPVYEGPLDVWGAKLTGGKVYFLTPDS FT GRVNLWLWDGKAERVVAGDHWIYGLDASNGKALLLIMTATRIGELYLYDGELKQVTDYN FT GPIFAKLKTFEPRHFRFRSKDMEIDGWYLKPELKEDEKAPVIVFVHGGPKGMYGHRFVY FT EMQLMANKGYYVVYVNPRGSDGYDEDFALRVLERTGLEDFEDIMAGIEEFFKLEPQADR FT ERVGITGISYGGFMTNWALTQSDLFKAGISENGISYWLTSYAFSDIGLWFDVEVIGPNP FT LENENFRKLSPLFYAKNVKAPILLIHSLEDYRCPLDQSLMFYNVLKDLGKEAYIAVFKK FT GPHGHSIRGSPKHRAKRYRLFIEFFERKLRKYEEGFDVEKVLKGGEE" FT gene 107791..108126 FT /locus_tag="TGAM_0115" FT /note="tg0115" FT CDS 107791..108126 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0115" FT /product="Conserved hypothetical protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A305" FT /protein_id="ACS32617.1" FT /translation="MKETTAVAVIFSTGLVLSLALRTYWGVVFAAMGIPVYLAYIAREQ FT NILAKSRLYDRDLFVMIGIAIAVILGFDYFWDPRAGLITLAIIVPVIAALHDRIKRSKG FT GQNVQHG" FT gene complement(108094..108741) FT /locus_tag="TGAM_0117" FT /note="tg0117" FT CDS complement(108094..108741) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0117" FT /product="Protein kinase, putative" FT /note="Contains protein kinase-like (SSF56112) domain" FT /db_xref="GOA:C5A306" FT /db_xref="InterPro:IPR011009" FT /db_xref="UniProtKB/TrEMBL:C5A306" FT /inference="protein motif:CDD:COG2112, Predicted Ser/Thr FT protein kinase [Signal transduction mechanisms]" FT /inference="protein motif:COG:COG2112 Predicted Ser/Thr FT protein kinase; T Signal transduction mechanisms" FT /inference="protein motif:Gene3D:G3D.3.30.200.20 no FT description" FT /inference="protein motif:superfamily:SSF56112 Protein FT kinase-like (PK-like) InterPro:IPR011009 Protein FT kinase-like" FT /protein_id="ACS32618.1" FT /translation="MFDHLIPERIRKELLRELSGLGIEALKPYSKGTTSVVFLGKLGEK FT RVIVKLQRPDSPRDNFRREAEILEAISPFGISPPLIARGRIGNLSYLVREFAEGEPILY FT AELKKRHLFQIAEKTALLDRLYLDHGQIQGGKHIIIGGDVYIIDFEKANWRKPNNLTSA FT MAMIFIGRNAISERVYKSFNLGEDFREAMKSALRVYKREGKLSAVLDVLATL" FT gene 108796..109023 FT /locus_tag="TGAM_0116" FT /note="tg0116" FT CDS 108796..109023 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0116" FT /product="Transcription regulator, putative, AsnC/Lrp FT family" FT /db_xref="GOA:C5A307" FT /db_xref="InterPro:IPR011008" FT /db_xref="InterPro:IPR019887" FT /db_xref="UniProtKB/TrEMBL:C5A307" FT /inference="protein motif:COG:COG1522 Transcriptional FT regulators; K Transcription" FT /inference="protein motif:HMMPfam:PF01037 AsnC_trans_reg FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:superfamily:SSF54909 Dimeric FT alpha+beta barrel InterPro:IPR011008 Dimeric alpha-beta FT barrel" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32619.1" FT /translation="MVTAFILMVTAAGKEREVMEKLLAMPEVKEAYVVYGEYDLVVKVE FT TDTLKDLDQFITEKIRRMPEIQMTSTMIAI" FT gene complement(109060..109734) FT /locus_tag="TGAM_0118" FT /note="tg0118" FT CDS complement(109060..109734) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0118" FT /product="Phosphate transport phoU/Pit related protein, FT putative" FT /db_xref="InterPro:IPR002727" FT /db_xref="InterPro:IPR018445" FT /db_xref="UniProtKB/TrEMBL:C5A308" FT /inference="protein motif:CDD:COG1392, Phosphate transport FT regulator (distant homolog of PhoU) [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:CDD:PhoU_div, Protein of unknown FT function DUF47" FT /inference="protein motif:COG:COG1392 Phosphate transport FT regulator (distant homolog of PhoU); P Inorganic ion FT transport and metabolism" FT /inference="protein motif:HMMPfam:PF01865 PhoU_div FT InterPro:IPR002727 Protein of unknown function DUF47" FT /inference="protein motif:HMMTigr:TIGR00153 FT TIGR00153:conserved hypothetical protein T FT InterPro:IPR002727 Protein of unknown function DUF47" FT /protein_id="ACS32620.1" FT /translation="MQVWIKLFAKSPFKPLIKHAEVVIETVETLERALQAWRAGNYGEM FT ERLAVEVDRLEDVADRIKEEIRDSLSSKLMMAVAREDVLIYLHMQDKVADAAEDTAKWL FT LVKRPGEIPEEIKDVILRMGRESIKAAKLVYEAIVQMDRVIESGFAEKEIEREYELIRE FT IEGVEQNIDGLDTELMKLVFKNEDKLTWGDGTYILNIARTLSNISDKAKDAAERIRLMM FT NK" FT gene complement(109739..110959) FT /gene="pitA" FT /gene_synonym="pho4" FT /locus_tag="TGAM_0119" FT /note="tg0119" FT CDS complement(109739..110959) FT /codon_start=1 FT /transl_table=11 FT /gene="pitA" FT /gene_synonym="pho4" FT /locus_tag="TGAM_0119" FT /product="Phosphate permease, pho4/PitA-like protein FT (pitA/pho4)" FT /note="12 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A309" FT /db_xref="InterPro:IPR001204" FT /db_xref="UniProtKB/TrEMBL:C5A309" FT /inference="protein motif:CDD:PHO4, Phosphate transporter FT family" FT /inference="protein motif:CDD:PitA, Phosphate/sulphate FT permeases [Inorganic ion transport and metabolism]" FT /inference="protein motif:COG:COG0306 Phosphate/sulphate FT permeases; P Inorganic ion transport and metabolism" FT /inference="protein motif:HMMPanther:PTHR11101 PHOSPHATE FT TRANSPORTER-RELATED InterPro:IPR001204 Phosphate FT transporter GO:Molecular Function:inorganic phosphate FT transporter activity (GO:0005315), Biological FT Process:phosphate transport (GO:0006817), Cellular FT Component:membrane (GO:0016020)" FT /inference="protein motif:HMMPanther:PTHR11101:SF1 FT PHOSPHATE TRANSPORTER-RELATED" FT /inference="protein motif:HMMPfam:PF01384 PHO4 FT InterPro:IPR001204 Phosphate transporter GO:Molecular FT Function:inorganic phosphate transporter activity FT (GO:0005315), Biological Process:phosphate transport FT (GO:0006817), Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32621.1" FT /translation="MGDMDPWLLVTIVVGFAMAWAIGANDAANSMSTAVGAGAITPKQA FT VLIAGVLEFTGAYFFGKSVTETIRKGIIYPDKITEPSVLIYGSVAALLAATVWLIIATK FT FGLPVSTTHSIIGGIVGYGIVYAGLSIVNWGKMAQVVLSWILSPIVGAVMAYLVFKALT FT RSIFMSGDPVKNARLWSPLWVGLAFVVIGTMFYIKVLHGKDLKAGVLLCGIPAGFVVFL FT ITYTLIRLRFPISDPYIGVESIFRRVQVVTSGYVALAHGANDVANAIGPVAAVYAVASM FT GLSGMKVPVPRWILAMGGLGIAVGVATYGYRVMETVGKKITELTNTRGFTIDFSAATVV FT LVASWLGMPISTTHTVVGAVIGIGLARGVKAINKDIVRDIIISWFVTVPVAAVISAVIF FT RVLMLVG" FT gene complement(111052..112002) FT /gene="cpkA" FT /locus_tag="TGAM_0120" FT /note="tg0120" FT CDS complement(111052..112002) FT /codon_start=1 FT /transl_table=11 FT /gene="cpkA" FT /locus_tag="TGAM_0120" FT /product="Carbamate kinase (Carbamate kinase-like FT carbamoylphosphate synthetase) (cpkA)" FT /EC_number="2.7.2.2" FT /db_xref="GOA:C5A310" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR003964" FT /db_xref="UniProtKB/TrEMBL:C5A310" FT /inference="protein motif:CDD:AAK, Amino Acid Kinases (AAK) FT superfamily, catalytic domain" FT /inference="protein motif:CDD:AAK_CK, AAK_CK:Carbamate FT kinase (CK) catalyzes both the ATP-phosphorylation of FT carbamate and carbamoyl phosphate (CP) utilization with the FT production of ATP from ADP and CP" FT /inference="protein motif:CDD:AAK_NAGK-C, FT AAK_NAGK-C:N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) FT catalyzes the phosphorylation of the gamma-COOH group of FT N-acetyl-L-glutamate (NAG) by ATP in the second step of FT arginine biosynthesis found in some bacteria and FT photosynthetic organisms using the non-acetylated, cyclic FT route of ornithine biosynthesis" FT /inference="protein motif:CDD:AAK_NAGK-like, FT AAK_NAGK-like:N-Acetyl-L-glutamate kinase (NAGK)-like" FT /inference="protein motif:CDD:AA_kinase, Amino acid kinase FT family" FT /inference="protein motif:CDD:ArcC, Carbamate kinase [Amino FT acid transport and metabolism]" FT /inference="protein motif:CDD:ArgB, Acetylglutamate kinase FT [Amino acid transport and metabolism]" FT /inference="protein motif:COG:COG0549 Carbamate kinase; E FT Amino acid transport and metabolism" FT /inference="protein motif:FPrintScan:PR01469 CARBMTKINASE FT InterPro:IPR003964 Bacterial carbamate kinase GO:Biological FT Process:arginine metabolism (GO:0006525), Molecular FT Function:carbamate kinase activity (GO:0008804)" FT /inference="protein motif:Gene3D:G3D.3.40.1160.10 no FT description" FT /inference="protein motif:HMMPfam:PF00696 AA_kinase FT InterPro:IPR001048 Aspartate/glutamate/uridylate kinase FT GO:Biological Process:amino acid biosynthesis (GO:0008652)" FT /inference="protein motif:HMMPIR:PIRSF000723 Carbamate FT kinase InterPro:IPR003964 Bacterial carbamate kinase FT GO:Biological Process:arginine metabolism (GO:0006525), FT Molecular Function:carbamate kinase activity (GO:0008804)" FT /inference="protein motif:HMMTigr:TIGR00746 arcC:carbamate FT kinase InterPro:IPR003964 Bacterial carbamate kinase FT GO:Biological Process:arginine metabolism (GO:0006525), FT Molecular Function:carbamate kinase activity (GO:0008804)" FT /inference="protein motif:superfamily:SSF53633 Carbamate FT kinase-like InterPro:IPR001048 FT Aspartate/glutamate/uridylate kinase GO:Biological FT Process:amino acid biosynthesis (GO:0008652)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32622.1" FT /translation="MILMKRVVIALGGNAILQRGQRGTYEEQMENVRKTAKQIADIIER FT GYEVVITHGNGPQVGALLLHMDAGQQLYGIPAQPMDVAGAMTQGQIGYMIGQALINELR FT KRGIDRPVATIVTQTIVDKNDPAFKNPSKPVGPFYDEETAKKLAKEKGWVVIEDAGRGW FT RRVVPSPDPKGHVEAPVIQDLVEKGFIVIASGGGGVPVIEENGELKGVEAVIDKDLAGE FT KLAEEVKADIFMILTDVNGAAINFGKPDERWLERVTVEELRKYYEEGHFKRGSMGPKVL FT AVIRFLEWGGERAIIASLDRAVEALEGKTGTQVFP" FT gene complement(112135..113397) FT /locus_tag="TGAM_0121" FT /note="tg0121" FT CDS complement(112135..113397) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0121" FT /product="Oxidoreductase" FT /note="Contains FAD/NAD(P)-binding domain, Aromatic-ring FT hydroxylase (flavoprotein monooxygenase) and adrenodoxin FT reductase family signatures" FT /db_xref="InterPro:IPR002937" FT /db_xref="UniProtKB/TrEMBL:C5A311" FT /inference="protein motif:CDD:Amino_oxidase, Flavin FT containing amine oxidoreductase" FT /inference="protein motif:CDD:COG1233, Phytoene FT dehydrogenase and related proteins [Secondary metabolites FT biosynthesis, transport, and catabolism]" FT /inference="protein motif:CDD:HemY, Protoporphyrinogen FT oxidase [Coenzyme metabolism]" FT /inference="protein motif:FPrintScan:PR00419 ADXRDTASE FT InterPro:IPR000759 Adrenodoxin reductase GO:Biological FT Process:electron transport (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.50.50.60 no FT description" FT /inference="protein motif:HMMPanther:PTHR10668 PHYTOENE FT DEHYDROGENASE-RELATED" FT /inference="protein motif:HMMPfam:PF01593 Amino_oxidase FT InterPro:IPR002937 Amine oxidase GO:Biological FT Process:electron transport (GO:0006118), Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:superfamily:SSF51905 FT FAD/NAD(P)-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32623.1" FT /translation="MRAVVIGSGIGGLLTASFLAKNGYEVMVLEKSPRIGGRFANLPYR FT GFGLSTGAFHMLPHGEDGPLAYLLKLLGAKVRVVDSNPKGMIFYEGKTFHYREGWKYLS FT FTEKAKATKLLLDVKRNKLPEGEEAEMSGREWIREKIGDNEFVDLFIKSFLGWADSVLD FT VPAGELAREIKAALKWGGPGLIKGGCSAVTDELARITEENGGRVLTRKRVVEVDVEGKK FT VIAAEGEEFPYDVLISNAGIKETVELIGRDNFDRDYLRRVDSLKPSEGIKYNVALKGKP FT RVGNTVVFTLDTERINGYNEPSSLSPELAKDGYTLVMLHHALQGRNIKAERRKGIEDVY FT KIFPNLDSEGEILLIQTYLDGNPVNRVASGQVVEDFPIKDVYVVGDAYKLPGGIEVEGI FT ALGVMRTLEMLGLGSFSKWYL" FT gene complement(113443..115401) FT /gene="gor" FT /locus_tag="TGAM_0122" FT /note="tg0122" FT CDS complement(113443..115401) FT /codon_start=1 FT /transl_table=11 FT /gene="gor" FT /locus_tag="TGAM_0122" FT /product="glyceraldehyde-3-phosphate (GAP):ferredoxin FT oxidoreductase (gor)" FT /EC_number="1.2.7.5" FT /db_xref="GOA:C5A312" FT /db_xref="InterPro:IPR001203" FT /db_xref="InterPro:IPR013983" FT /db_xref="InterPro:IPR013984" FT /db_xref="UniProtKB/TrEMBL:C5A312" FT /inference="protein motif:CDD:AFOR_N, Aldehyde ferredoxin FT oxidoreductase, N-terminal domain" FT /inference="protein motif:CDD:COG2414, Aldehyde:ferredoxin FT oxidoreductase [Energy production and conversion]" FT /inference="protein motif:COG:COG2414 Aldehyde:ferredoxin FT oxidoreductase; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.1.10.1200.10 no FT description InterPro:IPR009081 Acyl carrier protein-like" FT /inference="protein motif:Gene3D:G3D.1.10.569.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.60.9.10 no FT description" FT /inference="protein motif:HMMPfam:PF02730 AFOR_N FT InterPro:IPR001203 Aldehyde ferredoxin oxidoreductase FT GO:Biological Process:electron transport (GO:0006118), FT Molecular Function:oxidoreductase activity, acting on FT iron-sulfur proteins as donors (GO:0016730)" FT /inference="protein motif:superfamily:SSF48310 Aldehyde FT ferredoxin oxidoreductase, C-terminal domains" FT /inference="protein motif:superfamily:SSF56228 Aldehyde FT ferredoxin oxidoreductase, N-terminal domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32624.1" FT /translation="MRFTVLKLKLDENRVESEEFEKDDVYGVIDYGLELHESLETHSID FT PYDPRNIIVMGMGPFAGSVLPGAHRLMFFFRSPLYGTLFPSAMGGAAYAFKNVGVDFVT FT FEGKAEKPVVVLLYNDGESVRVELHEVELEKVIEVWRGYKGEEGVYALTQYLIDAFGSR FT FDFEYRIAVVGPAALNTNYGGIFSQALRKGKRLVGSEDWAARGGSGSVLLRAHNVIGII FT FGGKPRKRKFPGEDISNFKTAKEIVEGVHKKPYNEIIAEKTVKYRYNPKLKTGGTFGGN FT YPAEGDFVPILNWQMPYIPKEDRIKIHENIMKHYWEPFNEEAIKPKNWTTCGEPCPVVC FT KKYANGHHIEYEPREANGPLSGVITLRASDISVPAVDAMGFDAIEFGGTAAWVLELIHR FT DLLKPEEVGLSGKPEFTKDALIERPVETSEVNAKLVAELAHRVAFGENEIAKILGLGKR FT KASVIFDERFKDRLKYGESFKDYAVFTPLGEDGEITPTMYWAIGNYIPLPIQGRYWTFY FT QFGVFLEPEELAQKIIASALWEFWYDNVGWCRFHRGWMKPVLKALFMDAYGINIDMEEH FT AKKQIKRLIEYARKAGYVPVFWDSMRVIDLVAAGSEEFGNEKWAEKFRLDKVGTAKEYL FT SKVLDAYSEILGVEWRL" FT gene complement(115537..116664) FT /gene="fbp" FT /locus_tag="TGAM_0123" FT /note="tg0123" FT CDS complement(115537..116664) FT /codon_start=1 FT /transl_table=11 FT /gene="fbp" FT /locus_tag="TGAM_0123" FT /product="Fructose-1,6-bisphosphatase (FBPase V) (fbp)" FT /EC_number="3.1.3.11" FT /db_xref="GOA:C5A313" FT /db_xref="InterPro:IPR002803" FT /db_xref="UniProtKB/TrEMBL:C5A313" FT /inference="protein motif:BlastProDom:PD014260 FT Q8NKR9_PYRKO_Q8NKR9; InterPro:IPR002803 FT Fructose-1,6-bisphosphatase, class V" FT /inference="protein motif:COG:COG1980 Archaeal fructose FT 1,6-bisphosphatase; G Carbohydrate transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF01950 FBPase_3 FT InterPro:IPR002803 Fructose-1,6-bisphosphatase, class V" FT /inference="protein motif:ScanRegExp:PS00159 FT ALDOLASE_KDPG_KHG_1 InterPro:IPR000887 KDPG and KHG FT aldolase GO:Molecular Function:catalytic activity FT (GO:0003824), Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:superfamily:SSF47188 Hemerythrin" FT /inference="protein motif:superfamily:SSF51230 Single FT hybrid motif InterPro:IPR011053 Single hybrid motif" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32625.1" FT /translation="MAVGEKITISVIKADIGGWPGHSRVHPQLIETAEEILAKAKEEGT FT IIDFYVAYAGDDLQLIMTHKKGVDSPDVHGLAWKAFEEATKVAKELGLYGAGQDLLKDA FT FSGNVRGMGPGVAEMEITLRKSEPVVTFHMDKTEPGAFNLPIFRMFADPFNTAGLVIDP FT KMHMGFRFEVWDILKHKRVILNTPEEVYDLLALIGAKSRYVIKRVYPKEGHPIPKDEPV FT AVVSTEKLYEIAGEYVGKDDPVAIVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPI FT MPVPMHQANPTRFDGPPRVVALGWQISPEGKLVGPVDLFDDPAFDYARQKALEITDYMR FT RHGPFEPHRLPLEDMEYTTLPGVLKRLEERFEDIE" FT gene complement(116775..117041) FT /locus_tag="TGAM_0124" FT /note="tg0124" FT CDS complement(116775..117041) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0124" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A314" FT /protein_id="ACS32626.1" FT /translation="MTLTSLMVVLVGEPIVIGKDKFKIGEDETARRELRVVRVHDDVIQ FT VQEEVHGIIALVGASSSVNIKKEELKNLIKVVREHFGWTDVCE" FT gene 117102..117241 FT /locus_tag="TGAM_r003" FT /note="tg_tRNA-Trp" FT tRNA 117102..117241 FT /locus_tag="TGAM_r003" FT /product="tRNA-Trp" FT /note="codon recognized: UGG" FT gene complement(118001..118076) FT /locus_tag="TGAM_r004" FT /note="tg_tRNA-Gln1" FT tRNA complement(118001..118076) FT /locus_tag="TGAM_r004" FT /product="tRNA-Gln" FT /note="codon recognized: CAA" FT gene complement(118343..119029) FT /locus_tag="TGAM_0125" FT /note="tg0125" FT CDS complement(118343..119029) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0125" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A315" FT /inference="protein motif:Gene3D:G3D.3.30.40.10 no FT description" FT /inference="protein motif:superfamily:SSF57850 RING/U-box" FT /protein_id="ACS32627.1" FT /translation="MLDQFKLLPSVAYLRVERQAFIGYSMPLAGWIGEYLINYQKLPRP FT NFLGRAMRKLGFSLVGEERDDRYITQFFTKKGVSISASWDVERESLFLQLIPLRSRLSR FT GLTVRTEHIEFYDQYVVGIEPAGKLPPGIRGIGIKALILEDFYPVETPYWGMLHEDWES FT ELNLLVMRDEVYDSLKREEYRCPVCFSPLTEENGVLKCTRCGFVYTPETDFERVIEQFS FT VEEFAF" FT gene complement(119069..123448) FT /gene="dp2" FT /gene_synonym="polC" FT /locus_tag="TGAM_0126" FT /note="tg0126" FT CDS complement(119069..123448) FT /codon_start=1 FT /transl_table=11 FT /gene="dp2" FT /gene_synonym="polC" FT /locus_tag="TGAM_0126" FT /product="DNA polymerase II large subunit DP2, intein FT containing (dp2/polC)" FT /EC_number="2.7.7.7" FT /db_xref="GOA:C5A316" FT /db_xref="InterPro:IPR003586" FT /db_xref="InterPro:IPR003587" FT /db_xref="InterPro:IPR004475" FT /db_xref="InterPro:IPR006141" FT /db_xref="InterPro:IPR016033" FT /db_xref="UniProtKB/TrEMBL:C5A316" FT /inference="protein motif:COG:COG1933 Archaeal DNA FT polymerase II, large subunit; L Replication, recombination FT and repair" FT /inference="protein motif:Gene3D:G3D.2.170.16.10 no FT description" FT /inference="protein motif:Gene3D:G3D.2.20.28.10 no FT description" FT /inference="protein motif:HMMPfam:PF02002 TFIIE_alpha FT InterPro:IPR002853 Transcription factor TFIIE, alpha FT subunit GO:Molecular Function:RNA polymerase II FT transcription factor activity (GO:0003702), Cellular FT Component:transcription factor TFIIE complex (GO:0005673), FT Biological Process:transcription initiation from RNA FT polymerase II promoter (GO:0006367)" FT /inference="protein motif:HMMPfam:PF03833 PolC_DP2 FT InterPro:IPR004475 DNA polymerase II large subunit DP2 FT GO:Molecular Function:DNA binding (GO:0003677), Molecular FT Function:DNA-directed DNA polymerase activity (GO:0003887), FT Biological Process:DNA replication (GO:0006260), Biological FT Process:DNA catabolism (GO:0006308)" FT /inference="protein motif:HMMSmart:SM00305 no description FT InterPro:IPR003586 Hedgehog/intein hint domain, C-terminal" FT /inference="protein motif:HMMSmart:SM00306 no description FT InterPro:IPR003587 Hedgehog/intein hint, N-terminal" FT /inference="protein motif:HMMTigr:TIGR00354 polC:DNA FT polymerase II, large subunit D InterPro:IPR004475 DNA FT polymerase II large subunit DP2 GO:Molecular Function:DNA FT binding (GO:0003677), Molecular Function:DNA-directed DNA FT polymerase activity (GO:0003887), Biological Process:DNA FT replication (GO:0006260), Biological Process:DNA catabolism FT (GO:0006308)" FT /inference="protein motif:HMMTigr:TIGR01445 FT intein_Nterm:intein N-terminal splicing InterPro:IPR006141 FT Protein splicing (intein) site GO:Biological FT Process:intein-mediated protein splicing (GO:0016539)" FT /inference="protein motif:ProfileScan:PS50817 INTEIN_N_TER FT InterPro:IPR006141 Protein splicing (intein) site FT GO:Biological Process:intein-mediated protein splicing FT (GO:0016539)" FT /inference="protein motif:ProfileScan:PS50818 INTEIN_C_TER FT InterPro:IPR006141 Protein splicing (intein) site FT GO:Biological Process:intein-mediated protein splicing FT (GO:0016539)" FT /inference="protein motif:superfamily:SSF51294 FT Hedgehog/intein (Hint) domain" FT /inference="protein motif:superfamily:SSF57850 RING/U-box" FT /inference="protein motif:superfamily:SSF63393" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32628.1" FT /translation="MGDELYSPGMKAYFESLQREIDRAYEIARKARSQGKDPSLDVEVP FT QATDMAGRVESLVGPPGVAERIRVLVKEYGKELAALKVVDEIIEGKFGDLGSKERYAEQ FT AVRTALAILTEGIVSAPLEGIADVKIKRNTWADNSEYLALYYAGPIRSSGGTAQALSVL FT VGDYVRKKLGLDRFKPSEEHIERMVEEIDLYHRAVTRLQYHPEADEVRLAMRNIPIEIT FT GEETDKVEVSHRNVPGVETNHLRGGAILVLAEGVLQKAKKLVKYIDKMGVEGWDWIKEF FT VEAKEKGKSEEPKADESKAEDSGAREEITEKVEKGFYYELYERFKANIAPNKKYTKEII FT GGRPLFAEPSENGGFRLRYGRSRVSGFATWSVNPATMLILDEFIAIGTQMKTERPGKGC FT IVTPATTVEGPIVKLKDGSVVRVDDYETALRVKNEIEEILYVGDALVNFGDFVENNQTL FT LPANYVEEWWVQELVKAIEELYEVELKPFSDNPREAIEEAAEYLEIDPDFLESLLRDPL FT RVRPSVELAIHLSKVLDIPFHPYYTLYWNTLKPEEVEELQRALLNAQIEWDEFRKLKFA FT RKVILDNDPRIKRYLELLGLPHRLERTEDRRKVIVVDYPWSAALLTPLGNLEWEFKAKP FT FHTVIDIINENNPIKLRDRGISWIGARMGRPEKAKERKMKPPVQVLFPIGLAGGQSRDI FT KKAAEEGKTAKVEIAFFRCPKCGHVGPEHLCPVCGTRKELLWHCPKCNVDYPESEAKEF FT GFRCPRCDVELRPYAEREIKPSELLRRAMENVKVYGIDRLKGVKGMTSGYKMAEPLEKG FT LLRVKNDVYVFKDGTIRFDATDAPITHFKPKEIGVSVEKLRELGYTHDFEGKPLERDDQ FT IVELKVQDIILSYEAGKYLLKVARFVDDLLEKFYGLPRFYNAEKMEDLIGHLVIGLAPH FT TSAGIIGRIIGFSDVLVGYAHPYYHAAKRRNCFPGDTRILVQIDGKPARITLRELYELF FT EGESYENMVYVRRKPKRDVKVYSFDPERGKVVLTDIEDVIKAPSTDHLIRFELELGRSF FT ETTVDHPVLVYENGKFVEKRAFEVKEGELIGVYENDSIKPFKIERIKYVKPKDDFVFSL FT NAKSYHNVLINENVVTHQCDGDEDAVMLLLDALLNFSKYYLPEKRGGKMDAPLVVTTRL FT DPREVDSEVHNMDVVRYYPLEFYEATYEMKSPKEIKFIERVEDRLGKPEMYEGIKFTHD FT TDDIGLGPKMSLYKQLGDMVEKVERQLALAERIRAVDEHHVAETILNSHLIPDLRGNLR FT SFTRQEFRCVKCNTKYRRPPLTGRCPKCGGKIVLTVSKGAVEKYLPTAKMLVTRYNVKD FT YTRQRICLTEKDIKTLFETVLPEKQRTLLGFSADVCEKMIKERTGSSNGKNGYLDGFNG FT KNGKVGKAKTSKEVEKKNDAESRTKKKPSENLKKEVKKEKAKAKRKKRISLDEFFGS" FT mat_peptide complement(join(119072..120070,120674..123448)) FT /gene="dp2" FT /gene_synonym="polC" FT /locus_tag="TGAM_0126" FT /product="DNA polymerase II large subunit DP2" FT mat_peptide complement(120071..120673) FT /gene="dp2" FT /gene_synonym="polC" FT /locus_tag="TGAM_0126" FT /product="intein" FT gene complement(123449..125431) FT /gene="dp1" FT /locus_tag="TGAM_0127" FT /note="tg0127; polB" FT CDS complement(123449..125431) FT /codon_start=1 FT /transl_table=11 FT /gene="dp1" FT /locus_tag="TGAM_0127" FT /product="DNA polymerase II small subunit (dp1/polB)" FT /EC_number="2.7.7.7" FT /db_xref="GOA:C5A317" FT /db_xref="InterPro:IPR007185" FT /db_xref="InterPro:IPR011149" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR024826" FT /db_xref="UniProtKB/TrEMBL:C5A317" FT /inference="protein motif:CDD:HYS2, Archaeal DNA polymerase FT II, small subunit/DNA polymerase delta, subunit B [DNA FT replication, recombination, and repair]" FT /inference="protein motif:COG:COG1311 Archaeal DNA FT polymerase II, small subunit/DNA polymerase delta, subunit FT B; L Replication, recombination and repair" FT /inference="protein motif:Gene3D:G3D.2.40.50.140 no FT description InterPro:IPR012340 Nucleic acid-binding, FT OB-fold, subgroup" FT /inference="protein motif:Gene3D:G3D.3.60.21.10 no FT description" FT /inference="protein motif:HMMPfam:PF00149 Metallophos FT InterPro:IPR004843 Metallophosphoesterase" FT /inference="protein motif:HMMPfam:PF01336 tRNA_anti FT InterPro:IPR004365 nucleic acid binding, OB-fold, FT tRNA/helicase-type" FT /inference="protein motif:HMMPIR:PIRSF000803 DNA polymerase FT II small subunit, archaeal type InterPro:IPR011149 DNA FT polymerase II small subunit, archaeal" FT /inference="protein motif:ProfileScan:PS50185 PHOSPHO_ESTER FT InterPro:IPR004843 Metallophosphoesterase" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold" FT /inference="protein motif:superfamily:SSF56300 FT Metallo-dependent phosphatases" FT /protein_id="ACS32629.1" FT /translation="MLVEDLMRNKYLITPSAYYLLEQYYKKDFSLAELIKFAKARGSFV FT ITSSIAEEFLSSKGLITSAPPEASEVPSETGGLETYISTGNPVEKGPLESSNDENMVET FT ESFSGGESFVSTGTDLNESPVEVVVDSEESAQEEVSSGPFPVETGENVVDVPDLYGDEP FT LDADSNGELNGVSVENGNGVTPKIIYGDYGIPIAYVGEEVPEEEKSYSVYDDVVITPNP FT AFHYRAAEMPDESEVVFDVKNVRLSPPKANNAAGKEGEFLVEAYRLYFRSRLKKMRRIF FT RENPEIGGIIDIGKLSYVQPGSEVTVVGLLTDKRETSKGYVLELEDATGRIKVFINRNR FT EDAKLVMSIMHDAAIAVSGKYSGKGMIFADHIYLPDVPKVRSPKPPLKEKVYAVLLSDI FT HVGSNKFCEKAFEKFLEWLNGNVENETHAELVSRIKYMIIAGDVVDGVGIYPGQYEELA FT IPDIFDQYEALANLLRNVPDHIHVFIGPGNHDAARTALPQPGFYEEYARPIYRLKNVTI FT ISNPALIKLHGREFLIAHGRGIEDVVTEIPNRSHHRPAEAMVELLKLRHLAPTFGGKVP FT IAPDPEDLLVIESVPDLFQAGHVHVMQYKIYNGVFVINTGTWQAQTEFQKMVNIVPTPA FT RVPIIDVETARLRAVINFEQFCEGV" FT gene complement(125431..126738) FT /gene="cdc6" FT /locus_tag="TGAM_0128" FT /note="tg0128" FT CDS complement(125431..126738) FT /codon_start=1 FT /transl_table=11 FT /gene="cdc6" FT /locus_tag="TGAM_0128" FT /product="Cell division control protein 6-like protein FT (cdc6)" FT /db_xref="GOA:C5A318" FT /db_xref="InterPro:IPR000767" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR003959" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR014277" FT /db_xref="InterPro:IPR015163" FT /db_xref="UniProtKB/TrEMBL:C5A318" FT /inference="protein motif:CDD:CDC6, Cdc6-related protein, FT AAA superfamily ATPase [DNA replication, recombination, and FT repair / Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:COG:COG1474 Cdc6-related protein, FT AAA superfamily ATPase; L Replication, recombination and FT repair" FT /inference="protein motif:FPrintScan:PR00364 DISEASERSIST FT InterPro:IPR000767 Disease resistance protein GO:Biological FT Process:defense response (GO:0006952), Biological FT Process:defense response to pathogen (GO:0042829)" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR10763 CDC6 AND FT ORIGIN RECOGNITION COMPLEX SUBUNIT 1" FT /inference="protein motif:HMMPanther:PTHR10763:SF1 CDC6" FT /inference="protein motif:HMMPfam:PF00004 AAA FT InterPro:IPR003959 AAA ATPase, central region GO:Molecular FT Function:ATP binding (GO:0005524)" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32630.1" FT /translation="MACPSVAGGVSFPLEVKSVVPMDDYLGSIFEKYLHAKKIFKNKEV FT LRHSYTPKELPHRREQIEELAHILVPVLRGETPSNVFVYGKTGTGKTVTIKFVTEELKK FT ISDKYNVPVEVIYINCEIVDTQYRVLANIVNYFKEESGVEVPLVGWPTDEVYARLKEVI FT DSKERFVIIVLDEIDKLVKKSGDDILYSLTRINTELSKAKVSIIGISNDLKFKEYLDAR FT VLSSLSEEEVVFPPYDATQLRDILMQRAKDAFNEGVLDDAVVPLCAALAAREHGDARRA FT LDLLRVAGEIAEREGASKVTERHVWLAQEKIEQDTMEEVIKTLPLHSKVLLHAIVLLDE FT NGELPANTGDVYSIYKSLCDYIDLDPLTQRRISDLINELDMLGIINAKVVSKGRYGRTK FT EIRLNVTPHKVKKVFSQDDQLRPLLTLNLSRQRRLI" FT gene 127592..128611 FT /locus_tag="TGAM_0129" FT /note="tg0129" FT CDS 127592..128611 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0129" FT /product="Voltage-gated potassium channel" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A319" FT /db_xref="InterPro:IPR003091" FT /db_xref="InterPro:IPR003148" FT /db_xref="InterPro:IPR003929" FT /db_xref="InterPro:IPR013099" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A319" FT /inference="protein motif:CDD:TrkA, K+ transport systems, FT NAD-binding component [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:TrkA_N, TrkA-N domain" FT /inference="protein motif:COG:COG1226 Kef-type K+ transport FT systems, predicted NAD-binding component; P Inorganic ion FT transport and metabolism" FT /inference="protein motif:FPrintScan:PR00169 KCHANNEL FT InterPro:IPR003091 Voltage-dependent potassium channel FT GO:Molecular Function:voltage-gated potassium channel FT activity (GO:0005249), Biological Process:potassium ion FT transport (GO:0006813), Cellular Component:voltage-gated FT potassium channel complex (GO:0008076)" FT /inference="protein motif:Gene3D:G3D.1.10.287.70 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPanther:PTHR11537 FT VOLTAGE-GATED POTASSIUM CHANNEL" FT /inference="protein motif:HMMPanther:PTHR11537:SF13 FT VOLTAGE-GATED POTASSIUM CHANNEL PROTEIN KV1.6" FT /inference="protein motif:HMMPfam:PF02254 TrkA_N FT InterPro:IPR003148 TrkA-N GO:Biological Process:potassium FT ion transport (GO:0006813)" FT /inference="protein motif:HMMPfam:PF07885 Ion_trans_2 FT InterPro:IPR013099 Ion transport 2, bacterial" FT /inference="protein motif:ProfileScan:PS50265 FT CHANNEL_PORE_K InterPro:IPR001622 K+ channel, pore region FT GO:Molecular Function:potassium channel activity FT (GO:0005267), Biological Process:potassium ion transport FT (GO:0006813), Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50266 FT CATION_CHANNEL_TM InterPro:IPR005820 Cation channel, FT non-ligand gated GO:Molecular Function:cation channel FT activity (GO:0005261), Biological Process:cation transport FT (GO:0006812), Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /inference="protein motif:superfamily:SSF81324 FT Voltage-gated potassium channels" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32631.1" FT /translation="MLPVIVVRRLLRMRIKVSRNRLIQIALVVLLLAVAFAVAFEYFEG FT VDFFTAFYWAVITMATIGYGDVTPSTEGGRIVAMVASVAGISTFTALVSLLAENFISSS FT LRRMMGMHRVSYSSHYLIIGQGSSVSTCVNELMGAIERGELKLAPIVVLFPSEEERKKV FT ELPEEIEVLIGDPTNRETLERARVDRASHVILALEDDSRAVFVTLMVKRMSNAKVLVEV FT LSEDSVELLKGAGADRVIVSRSLAGRLLASSVFEPEVVDVIDDITSSVKGYDITVIDGR FT NFWGRPYIEVFRELKETKNLFLLGYYRDGPVLNPPLDEPIPEGARLIVLRSSLSTRKL" FT gene 128784..129851 FT /gene="radA" FT /locus_tag="TGAM_0130" FT /note="tg0130" FT CDS 128784..129851 FT /codon_start=1 FT /transl_table=11 FT /gene="radA" FT /locus_tag="TGAM_0130" FT /product="DNA repair and recombination protein RadA (radA)" FT /db_xref="GOA:C5A320" FT /db_xref="InterPro:IPR003583" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010995" FT /db_xref="InterPro:IPR011938" FT /db_xref="InterPro:IPR013632" FT /db_xref="InterPro:IPR016467" FT /db_xref="InterPro:IPR020587" FT /db_xref="InterPro:IPR020588" FT /db_xref="InterPro:IPR021725" FT /db_xref="UniProtKB/TrEMBL:C5A320" FT /inference="protein motif:BlastProDom:PD000229 FT RADA_PYRHO_O58001; InterPro:IPR001553 RecA bacterial DNA FT recombination" FT /inference="protein motif:CDD:Rad51_DMC1_radA, FT Rad51_DMC1_radA,B" FT /inference="protein motif:CDD:radB, RadB" FT /inference="protein motif:CDD:RecA, recA bacterial DNA FT recombination protein" FT /inference="protein motif:CDD:recA, RecA is a bacterial FT enzyme which has roles in homologous recombination, DNA FT repair, and the induction of the SOS response" FT /inference="protein motif:CDD:RecA, RecA/RadA recombinase FT [DNA replication, recombination, and repair]" FT /inference="protein motif:CDD:RecA-like_NTPases, RecA-like FT NTPases" FT /inference="protein motif:CDD:recA_like, RecA is a FT bacterial enzyme which has roles in homologous FT recombination, DNA repair, and the induction of the SOS FT response" FT /inference="protein motif:COG:COG0468 RecA/RadA FT recombinase; L Replication, recombination and repair" FT /inference="protein motif:FPrintScan:PR00142 RECA FT InterPro:IPR001553 RecA bacterial DNA recombination" FT /inference="protein motif:Gene3D:G3D.1.10.150.70 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR13682 GLUTAMINE FT SYNTHETASE/DNA REPAIR PROTEIN-RELATED" FT /inference="protein motif:HMMPanther:PTHR13682:SF14 DNA FT REPAIR PROTEIN RADA" FT /inference="protein motif:HMMPfam:PF00633 HHH FT InterPro:IPR000445 Helix-hairpin-helix motif" FT /inference="protein motif:HMMPfam:PF08423 Rad51 FT InterPro:IPR013632 Rad51, C-terminal" FT /inference="protein motif:HMMSmart:SM00278 no description FT InterPro:IPR003583 Helix-hairpin-helix DNA-binding, class FT 1" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase" FT /inference="protein motif:HMMTigr:TIGR02236 recomb_radA:DNA FT repair and recombination InterPro:IPR011938 DNA repair and FT recombination protein RadA" FT /inference="protein motif:ProfileScan:PS50120 HHH FT InterPro:IPR000445 Helix-hairpin-helix motif" FT /inference="protein motif:ProfileScan:PS50162 RECA_2 FT InterPro:IPR001553 RecA bacterial DNA recombination" FT /inference="protein motif:ProfileScan:PS50163 RECA_3 FT InterPro:IPR001553 RecA bacterial DNA recombination" FT /inference="protein motif:ScanRegExp:PS00012 FT PHOSPHOPANTETHEINE InterPro:IPR006162 Phosphopantetheine FT attachment site" FT /inference="protein motif:superfamily:SSF47794 DNA repair FT protein Rad51, N-terminal domain InterPro:IPR010995 Rad51, FT N-terminal" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32632.1" FT /translation="MSLMAKKKVDEVKELEEFEELEIAESSQSSSSKKKKGKEIKTLED FT LPGVGPATAEKLREAGYDSIEAIAVASPLELKEIAGISEGAALKIIQAAREAANIGTFM FT RADEYMEKRRTIGKISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQK FT PPEEGGLGGSVIWIDTENTFRPERIRQIAEARGLDPDEVLKNIYVARAFNSNHQMLLVE FT KAEEIIKEKASTDRPVKLLVVDSLMAHFRSEYVGRGSLAERQQKLAKHLADLHRLADLY FT DIAVFVTNQVQAKPDAFFGDPTRPVGGHILAHSATLRVYLRKGKAGKRVARLIDSPHLP FT EGEAVFRITEKGVED" FT gene 129892..130641 FT /locus_tag="TGAM_0131" FT /note="tg0131" FT CDS 129892..130641 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0131" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF91 family" FT /db_xref="InterPro:IPR002793" FT /db_xref="UniProtKB/TrEMBL:C5A321" FT /inference="protein motif:BlastProDom:PD013521 FT Q9V2E8_PYRAB_Q9V2E8; InterPro:IPR002793 Protein of unknown FT function DUF91" FT /inference="protein motif:CDD:COG1637, Predicted nuclease FT of the RecB family [DNA replication, recombination, and FT repair]" FT /inference="protein motif:CDD:DUF91, Protein of unknown FT function DUF91" FT /inference="protein motif:COG:COG1637 Predicted nuclease of FT the RecB family; L Replication, recombination and repair" FT /inference="protein motif:HMMPfam:PF01939 DUF91 FT InterPro:IPR002793 Protein of unknown function DUF91" FT /inference="protein motif:superfamily:SSF56420 Peptide FT deformylase" FT /protein_id="ACS32633.1" FT /translation="MPKVELRENPSPEEIKLLVDLAISSEGVLTIFARCRVHYDGRAKS FT ELGPGDRVIIVKPDGSFLIHQKEKREPVNWQPPGSVVRLELREKPVLISVRRKPRETLE FT VELDEVYLITVFHAEDYEELALTGSEAEMAELIFENPEVIELGFKPLYREKPIRHGIVD FT VLGVDRDGNLVVLELKRRRADLHAVSQLKRYVETLREEHENVRGILVAPSLTSGAKKLL FT EKEGLEFRKLEPPKRDGKSRGRQLRLF" FT gene complement(130638..131021) FT /locus_tag="TGAM_0132" FT /note="tg0132" FT CDS complement(130638..131021) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0132" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF473 family" FT /db_xref="InterPro:IPR007417" FT /db_xref="UniProtKB/TrEMBL:C5A322" FT /inference="protein motif:CDD:DUF473, Protein of unknown FT function (DUF473)" FT /inference="protein motif:COG:COG1935 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:Gene3D:G3D.3.40.50.1940 no FT description" FT /inference="protein motif:HMMPfam:PF04322 DUF473 FT InterPro:IPR007417 Protein of unknown function DUF473" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32634.1" FT /translation="MEAVILAGIARRVLDELLRNPYRTIELRSARNVLAIEEAMEEALR FT LFLTYDPLEDVSTGTEGLLAELIEARELETRVPWEESDEREITVCRAKVKLVGLGRVVE FT VERRDGILVARVRELFPQEMSMG" FT gene complement(131031..131756) FT /locus_tag="TGAM_0133" FT /note="tg0133" FT CDS complement(131031..131756) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0133" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF75 family" FT /db_xref="InterPro:IPR004425" FT /db_xref="InterPro:IPR019151" FT /db_xref="UniProtKB/TrEMBL:C5A323" FT /inference="protein motif:CDD:COG1938, Archaeal enzymes of FT ATP-grasp superfamily [General function prediction only]" FT /inference="protein motif:CDD:COG2047, Uncharacterized FT protein (ATP-grasp superfamily) [General function FT prediction only]" FT /inference="protein motif:CDD:DUF75, Protein of unknown FT function DUF75" FT /inference="protein motif:COG:COG1938 Archaeal enzymes of FT ATP-grasp superfamily; R General function prediction only" FT /inference="protein motif:HMMPfam:PF01908 DUF75 FT InterPro:IPR002766 Protein of unknown function DUF75" FT /inference="protein motif:HMMTigr:TIGR00161 FT TIGR00161:conserved hypothetical protein T FT InterPro:IPR004425 Conserved hypothetical protein 61 FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:superfamily:SSF51351 FT Triosephosphate isomerase (TIM) InterPro:IPR000652 FT Triosephosphate isomerase GO:Molecular FT Function:triose-phosphate isomerase activity (GO:0004807), FT Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:superfamily:SSF55770 Profilin FT (actin-binding protein)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32635.1" FT /translation="MEEKPVKLVLPEVKNPIFIEGYPGIGLVGHIAGNFLAKELGMEMI FT GYVESPFIPPMSIVLEGKPNPPLRFYGKDNVIVAVADIYVPPTLVNEIAKELASYLSEM FT KAEKVISIGGIGIGFFKEKMEVWGVGAREELNRELEEAGAKILQYGSIMGMSGKLLWEA FT GRRGLNAYVLLGETFGDRPDPRAAANVIEVLKKLTPIDVSTEPLIKEAEMIEEQLRKMH FT EQMEQARKKEMKQYESIYL" FT gene complement(131852..133141) FT /locus_tag="TGAM_0134" FT /note="tg0134" FT CDS complement(131852..133141) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0134" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A324" FT /inference="protein motif:HMMPfam:PF00478.12 IMP FT dehydrogenase / GMP reductase domain InterPro:IMP FT dehydrogenase/GMP reductase Molecular Function:catalytic FT activity (GO:0003824)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32636.1" FT /translation="MISMERKWIAAVVIVFLISSIALAYERHSGEMENPSTFALALQPL FT PNGKLTVLEKGSLGKVLGATVRNGEWVTYLKEDSHVLKSVPAPIVLYFTSDNRIVVGTL FT KDGKLGQTVELNLTKLLERAGSGNAGKGVSECPKGYVQVSDRYCIDENEPVVKGRVKLV FT QEWVPFMGMKIDTVREPINVVSLSWGIILDSTAVADYTLNVAGTPAAVPGNEYDGEKLR FT IAYSPEGIGLRTSNGSIERYVNLPLRYLTFQMEVACYDRYTGEYTHIPISGTYPVEIQL FT TGEYNLTEGQLNKKITSSTGMEGSILTDHPIKKGLFPTMNSSRQIRVGQNGYYTNIVFD FT FQGGRGYFYTFPVGGSDDNPSGEASAQRFLTISYSPHAKSFLTYSITIIRATPNATYIV FT ATPEIPIKLPGGEDGGEVATYFTVITAMRT" FT gene 133284..134057 FT /gene="mtaP-1" FT /locus_tag="TGAM_0135" FT /note="tg0135" FT CDS 133284..134057 FT /codon_start=1 FT /transl_table=11 FT /gene="mtaP-1" FT /locus_tag="TGAM_0135" FT /product="Methylthioadenosine phosphorylase (mtaP)" FT /EC_number="2.4.2.28" FT /db_xref="GOA:C5A325" FT /db_xref="InterPro:IPR000845" FT /db_xref="InterPro:IPR001369" FT /db_xref="InterPro:IPR010044" FT /db_xref="InterPro:IPR018099" FT /db_xref="UniProtKB/TrEMBL:C5A325" FT /inference="protein motif:CDD:Mtap_PNP, Phosphorylase FT family 2" FT /inference="protein motif:CDD:Pnp, Purine nucleoside FT phosphorylase [Nucleotide transport and metabolism]" FT /inference="protein motif:COG:COG0005 Purine nucleoside FT phosphorylase; F Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.1580 no FT description" FT /inference="protein motif:HMMPanther:PTHR11904 NUCLEOSIDE FT PHOSPHORYLASE InterPro:IPR001369 Purine phosphorylase, FT family 2 GO:Molecular Function:transferase activity, FT transferring pentosyl groups (GO:0016763)" FT /inference="protein motif:HMMPanther:PTHR11904:SF10 FT METHYLTHIOADENOSINE PHOSPHORYLASE" FT /inference="protein motif:HMMPfam:PF00896 Mtap_PNP FT InterPro:IPR001369 Purine phosphorylase, family 2 FT GO:Molecular Function:transferase activity, transferring FT pentosyl groups (GO:0016763)" FT /inference="protein motif:HMMTigr:TIGR01694 FT MTAP:methylthioadenosine phosphorylase InterPro:IPR010044 FT Methylthioadenosine phosphorylase GO:Molecular FT Function:transferase activity, transferring pentosyl groups FT (GO:0016763)" FT /inference="protein motif:ScanRegExp:PS01240 PNP_MTAP_2 FT InterPro:IPR001369 Purine phosphorylase, family 2 FT GO:Molecular Function:transferase activity, transferring FT pentosyl groups (GO:0016763)" FT /inference="protein motif:superfamily:SSF53167 Purine and FT uridine phosphorylases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32637.1" FT /translation="MPRIGIIGGSGVYGVFEPKETVKVHTPYGRPSAPVEIGEIEGVEV FT AFIPRHGKHHEFPPHEVPYRANIWALKELGVERVIGITAVGSLREEYKPGDIVITDQFI FT DFTKKRDYTFYNGPRVAHVSMADPFCPEMRRIFYETAKELGFPVHEKGTYVCIEGPRFS FT TRAESFMFRQYAHIIGMTLVPEVNLARELGMCYVNIATVTDYDVWAEKPVDAQEVLKVM FT AENNYKVQELLKKGIPRIPEERNCGCADVLKTMFV" FT gene 134164..134634 FT /locus_tag="TGAM_0136" FT /note="tg0136" FT CDS 134164..134634 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0136" FT /product="Thermonuclease-like protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A326" FT /db_xref="InterPro:IPR006021" FT /db_xref="InterPro:IPR016071" FT /db_xref="UniProtKB/TrEMBL:C5A326" FT /inference="protein motif:CDD:COG1525, Micrococcal nuclease FT (thermonuclease) homologs [DNA replication, recombination, FT and repair]" FT /inference="protein motif:CDD:SNase, Staphylococcal FT nuclease homologue" FT /inference="protein motif:CDD:SNc, Staphylococcal nuclease FT homologues" FT /inference="protein motif:COG:COG1525 Micrococcal nuclease FT (thermonuclease) homologs; L Replication, recombination and FT repair" FT /inference="protein motif:Gene3D:G3D.2.40.50.90 no FT description" FT /inference="protein motif:HMMPfam:PF00565 SNase FT InterPro:IPR006021 Staphylococcus nuclease (SNase-like) FT GO:Molecular Function:nucleic acid binding (GO:0003676)" FT /inference="protein motif:HMMSmart:SM00318 no description FT InterPro:IPR006021 Staphylococcus nuclease (SNase-like) FT GO:Molecular Function:nucleic acid binding (GO:0003676)" FT /inference="protein motif:ProfileScan:PS50830 TNASE_3 FT InterPro:IPR006021 Staphylococcus nuclease (SNase-like) FT GO:Molecular Function:nucleic acid binding (GO:0003676)" FT /inference="protein motif:superfamily:SSF50199 FT Staphylococcal nuclease" FT /protein_id="ACS32638.1" FT /translation="MVVAVRKALAIAPVVFFLLISGFVSAYEFQAYGYVTKVVDGDTVW FT FHSYYGYRAGETFKVRFADINAPELYTAEGKESKAALEWLFDTYGRHVYLDVDDVYETD FT HYGRVVAVVYLPFWYYGYALNVNEWLVESGYARIWNHYNEFNPYSWGLWVPI" FT gene 134631..135977 FT /locus_tag="TGAM_0137" FT /note="tg0137" FT CDS 134631..135977 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0137" FT /product="Metal-dependent chlorohydrolase family protein" FT /db_xref="GOA:C5A327" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="InterPro:IPR023512" FT /db_xref="UniProtKB/TrEMBL:C5A327" FT /inference="protein motif:BlastProDom:PD001248 FT YF15_PYRHO_O59184; InterPro:IPR011550 Amidohydrolase-like" FT /inference="protein motif:CDD:Amidohydro_1, Amidohydrolase FT family" FT /inference="protein motif:CDD:archeal_chlorohydrolases, FT Predicted chlorohydrolases" FT /inference="protein motif:CDD:ATZ_TRZ_like, TRZ/ATZ family FT contains enzymes from the atrazine degradation pathway and FT related hydrolases" FT /inference="protein motif:CDD:Bact_CD, Bacterial cytosine FT deaminase and related metal-dependent hydrolases" FT /inference="protein motif:CDD:D-aminoacylase, FT D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) FT catalyze the hydrolysis of N-acyl-D-amino acids to produce FT the corresponding D-amino acids, which are used as FT intermediates in the synthesis of pesticides, bioactive FT peptides, and antibiotics" FT /inference="protein motif:CDD:GDEase, Guanine deaminase FT (GDEase)" FT /inference="protein motif:CDD:HutI, Imidazolonepropionase FT and related amidohydrolases [Secondary metabolites FT biosynthesis, transport, and catabolism]" FT /inference="protein motif:CDD:Imidazolone-5PH, FT Imidazolonepropionase/imidazolone-5-propionate hydrolase FT (Imidazolone-5PH) catalyzes the third step in the histidine FT degradation pathway, the hydrolysis of FT (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to FT N-formimidoyl-L-glutamate" FT /inference="protein motif:CDD:metallo-dependent_hydrolases, FT Superfamily of metallo-dependent hydrolases (also called FT amidohydrolase superfamily) is a large group of proteins FT that show conservation in their 3-dimensional fold (TIM FT barrel) and in details of their active site" FT /inference="protein motif:CDD:Met_dep_hydrolase_B, FT Metallo-dependent hydrolases, subgroup B is part of the FT superfamily of metallo-dependent hydrolases, a large group FT of proteins that show conservation in their 3-dimensional FT fold (TIM barrel) and in details of their active site" FT /inference="protein motif:CDD:Met_dep_hydrolase_D, FT Metallo-dependent hydrolases, subgroup D is part of the FT superfamily of metallo-dependent hydrolases, a large group FT of proteins that show conservation in their 3-dimensional FT fold (TIM barrel) and in details of their active site" FT /inference="protein motif:CDD:Met_dep_hydrolase_E, FT Metallo-dependent hydrolases, subgroup D is part of the FT superfamily of metallo-dependent hydrolases, a large group FT of proteins that show conservation in their 3-dimensional FT fold (TIM barrel) and in details of their active site" FT /inference="protein motif:CDD:PyrC, Dihydroorotase and FT related cyclic amidohydrolases [Nucleotide transport and FT metabolism]" FT /inference="protein motif:CDD:SsnA, Cytosine deaminase and FT related metal-dependent hydrolases [Nucleotide transport FT and metabolism / General function prediction only]" FT /inference="protein motif:COG:COG0402 Cytosine deaminase FT and related metal-dependent hydrolases; F Nucleotide FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.2.30.40.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11271 ATRAZINE FT CHLOROHYDROLASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11271:SF13 FT N-ETHYLAMMELINE CHLOROHYDROLASE" FT /inference="protein motif:HMMPfam:PF01979 Amidohydro_1 FT InterPro:IPR006680 Amidohydrolase 1 GO:Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:superfamily:SSF51338 Composite FT domain of metallo-dependent hydrolases InterPro:IPR011059 FT Metallo-dependent hydrolase, composite" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32639.1" FT /translation="MRTLLFRHLFNFQRKHTPLKGGIAMSVLIRNGYVVYGENLEVIKA FT DVLIEGNRIVEVKRGINEPADTVIDATGKVVSPGFVNLHTHSPMGLFRGLADDLPLMEW FT LEKHIWPREAKLTREHIKVGAYLGALEMIKTGTTTFLDMYFQMDAVAEAIFEAGLRGYL FT SYGMIDLGDPERTEKELSEAIREMRAIEKLNSDRVHFVFGPHAPYTCSLALLKEVRKLA FT DEHNKLITIHVAETMAELGKIQERYGKSPVVLLDEIGFFGSDVIIAHGVWLDSRDIAIL FT ARNGVTVAHNPASNMKLASGVMPLQRLLNAGVNVGLGTDGSASNNNLDMVEEMKLAALL FT HKVHNLDPTVADARTVFKMATQNGAKALRLNAGVIKPGYLADVVIFDFNQPHLRPINDV FT VSHLVYSANGNDVETTIVDGKILMLDREVLTLDEEKIFQRVEEAVESLS" FT gene complement(135980..136267) FT /locus_tag="TGAM_0138" FT /note="tg0138" FT CDS complement(135980..136267) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0138" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A328" FT /protein_id="ACS32640.1" FT /translation="MEIIVENFKPKVTRPFKRKNEYWIKLILPDGEEYIMKFKTPLEAE FT DAIYGMLDDLQVYGGKVKLKLREGNVIEDIEVLELYKPSAKELVEEYFGG" FT gene complement(136326..137213) FT /gene="rbsK" FT /locus_tag="TGAM_0139" FT /note="tg0139" FT CDS complement(136326..137213) FT /codon_start=1 FT /transl_table=11 FT /gene="rbsK" FT /locus_tag="TGAM_0139" FT /product="Sugar kinase, putative ribokinase (rbsK)" FT /EC_number="2.7.1.-" FT /db_xref="GOA:C5A329" FT /db_xref="InterPro:IPR002139" FT /db_xref="InterPro:IPR002173" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:C5A329" FT /inference="protein motif:CDD:adenosine_kinase, Adenosine FT kinase (AK) catalyzes the phosphorylation of FT ribofuranosyl-containing nucleoside analogues at the FT 5'-hydroxyl using ATP or GTP as the phosphate donor" FT /inference="protein motif:CDD:bac_FRK, Fructokinases (FRKs) FT mainly from bacteria and plants are enzymes with high FT specificity for fructose, as are all FRKs, but they FT catalyzes the conversion of fructose to FT fructose-6-phosphate, which is an entry point into FT glycolysis via conversion into glucose-6-phosphate" FT /inference="protein motif:CDD:Fructoselysine_kinase_like, FT Fructoselysine kinase-like" FT /inference="protein motif:CDD:FruK, Fructose-1-phosphate FT kinase and related fructose-6-phosphate kinase (PfkB) FT [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:FruK_PfkB_like, FT 1-phosphofructokinase (FruK), minor 6-phosphofructokinase FT (pfkB) and related sugar kinases" FT /inference="protein motif:CDD:Guanosine_kinase_like, FT Guanosine kinase-like sugar kinases" FT /inference="protein motif:CDD:KdgK, 2-keto-3-deoxygluconate FT kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) FT to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)" FT /inference="protein motif:CDD:Ketohexokinase, FT Ketohexokinase (fructokinase, KHK) catalyzes the FT phosphorylation of fructose to fructose-1-phosphate (F1P), FT the first step in the metabolism of dietary fructose" FT /inference="protein motif:CDD:PfkB, pfkB family FT carbohydrate kinase" FT /inference="protein motif:CDD:RbsK, Sugar kinases, FT ribokinase family [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:RfaE, ADP-heptose synthase, FT bifunctional sugar kinase/adenylyltransferase [Cell FT envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:RfaE_like, RfaE encodes a FT bifunctional ADP-heptose synthase involved in the FT biosynthesis of the lipopolysaccharide (LPS) core precursor FT ADP-L-glycero-D-manno-heptose" FT /inference="protein motif:CDD:ribokinase, Ribokinase FT catalyses the phosphorylation of ribose to FT ribose-5-phosphate using ATP" FT /inference="protein motif:CDD:ribokinase_group_A, FT Ribokinase-like subgroup A" FT /inference="protein motif:CDD:ribokinase_group_B, FT Ribokinase-like subgroup B" FT /inference="protein motif:CDD:ribokinase_pfkB_like, FT ribokinase/pfkB superfamily:Kinases that accept a wide FT variety of substrates, including carbohydrates and aromatic FT small molecules, all are phosphorylated at a hydroxyl FT group" FT /inference="protein motif:CDD:YegV_kinase_like, YegV-like FT sugar kinase" FT /inference="protein motif:CDD:YeiC_kinase_like, YeiC-like FT sugar kinase" FT /inference="protein motif:COG:COG0524 Sugar kinases, FT ribokinase family; G Carbohydrate transport and metabolism" FT /inference="protein motif:FPrintScan:PR00990 RIBOKINASE FT InterPro:IPR002139 Ribokinase GO:Molecular FT Function:ribokinase activity (GO:0004747), Biological FT Process:D-ribose metabolism (GO:0006014)" FT /inference="protein motif:Gene3D:G3D.3.40.1190.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR10584 PFKB FAMILY FT OF CARBOHYDRATE KINASES" FT /inference="protein motif:HMMPanther:PTHR10584:SF24 FT RIBOKINASE" FT /inference="protein motif:HMMPfam:PF00294 PfkB FT InterPro:IPR011611 PfkB" FT /inference="protein motif:ScanRegExp:PS00584 PFKB_KINASES_2 FT InterPro:IPR002173 Carbohydrate kinase, PfkB" FT /inference="protein motif:superfamily:SSF53613 FT Ribokinase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32641.1" FT /translation="MFDVIGIGNLNYDIIMLVDRFPEFHEKISAKKAVFGLGGAAGNTI FT TWLAHMGLKTGFIGAVGNDEVGRAHIEYFKRIGVDTGGIKVVDVPSGIAVAIIHGEDKR FT IVKYLGANEKRELDFDYMKRARHIHLSSNPPRIIREAIEFASENGITVSLDIGEAPLPE FT DVEERIDYLLMNEDEYRRKFGSLDPSLSKAKNLIITLNGGGAIVRDQQGRIKEIRGLSA FT KVVDSTGAGDSFAAGIIFGVLKGWSLEDSAKLGMLLAYLTVQKVGARSAVVPLERIVEK FT SRELNLNLPFDGNP" FT gene 137359..137670 FT /gene="atpH" FT /locus_tag="TGAM_0140" FT /note="tg0140" FT CDS 137359..137670 FT /codon_start=1 FT /transl_table=11 FT /gene="atpH" FT /locus_tag="TGAM_0140" FT /product="Archaeal/vacuolar-type H+-ATPase subunit H FT (atpH)" FT /EC_number="3.6.3.14" FT /db_xref="GOA:C5A330" FT /db_xref="InterPro:IPR014275" FT /db_xref="UniProtKB/TrEMBL:C5A330" FT /inference="protein motif:COG:COG2811 FT Archaeal/vacuolar-type H+-ATPase subunit H; C Energy FT production and conversion" FT /inference="protein motif:superfamily:SSF81573 F1F0 ATP FT synthase subunit B, membrane domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32642.1" FT /translation="MEDVIKRIVDAEKEAEARIEGAKAEAKKIIEKAKSEAKLIEEEII FT EKARAEGEELVEKARKEGEEEARKITEAGEKEIEEMKVKATQNFEKAVSAAVQLVRGS" FT gene 137673..139679 FT /gene="atpI" FT /locus_tag="TGAM_0141" FT /note="tg0141" FT CDS 137673..139679 FT /codon_start=1 FT /transl_table=11 FT /gene="atpI" FT /locus_tag="TGAM_0141" FT /product="Archaeal/vacuolar-type H+-ATPase subunit I FT (atpI)" FT /EC_number="3.6.3.14" FT /note="7 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A331" FT /db_xref="InterPro:IPR002490" FT /db_xref="UniProtKB/TrEMBL:C5A331" FT /inference="protein motif:CDD:NtpI, Archaeal/vacuolar-type FT H+-ATPase subunit I [Energy production and conversion]" FT /inference="protein motif:CDD:V_ATPase_I, V-type ATPase FT 116kDa subunit family" FT /inference="protein motif:COG:COG1269 FT Archaeal/vacuolar-type H+-ATPase subunit I; C Energy FT production and conversion" FT /inference="protein motif:HMMPanther:PTHR11629 VACUOLAR ATP FT SYNTHASE InterPro:IPR002490 ATPase, V0/A0 complex, 116-kDa FT subunit GO:Biological Process:proton transport FT (GO:0015992), Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:HMMPanther:PTHR11629:SF1 VACUOLAR FT ATP SYNTHASE" FT /inference="protein motif:HMMPfam:PF01496 V_ATPase_I FT InterPro:IPR002490 ATPase, V0/A0 complex, 116-kDa subunit FT GO:Biological Process:proton transport (GO:0015992), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:ScanRegExp:PS01034 FT GLYCOSYL_HYDROL_F16 InterPro:IPR008263 Glycoside hydrolase, FT family 16, active site GO:Molecular Function:hydrolase FT activity, hydrolyzing O-glycosyl compounds (GO:0004553), FT Biological Process:carbohydrate metabolism (GO:0005975)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32643.1" FT /translation="MFRPAEMLKVELITLERYRDKLLTYLHEAGVVEIREVDVEIAQRD FT APNEFYRKAASYAITISRMADFLKAHLPARGGGIKEFIFPKEPERKEYHYRGIEELIKD FT TEKFLAEVEPLIKAVEGRISSINTEIERIKADMEILEILSSFNIDVSYLRHSGTVTVLV FT GTVDRAKFPSLREELSSALEGKVAIVHRDLKDTVVMVLAFLTKDYDRANPVLAKHSFER FT LEIPRGEGTPSELLKEYRRMLSKKLDELERVHREASEIAEKYYRDVLFYLELVENERNK FT ANALNLLARTNMTFALSGWVPEEDAKKVEEGVKEITNGVVYISFKKPKKEEIEEIPIKL FT KNPGWARPFEMLTEMYGVPRYDEIDPTPIIAFTYSFFFGFMLTDFLYGLIVGIIAALLV FT KGHKKFNDGTYKFAYTLLWSSVFTMLMGILFGSYFGNAGDIVLQYVTGNPNAQFWRIAD FT ALKDPMFVLILALAIGLAHLFTGYTLGFIVKWKNGDVKGAILEQLPWMLVIIAVVLFAT FT KNASLATPAKVLFGIGIVLFAIGEIVANGGLAALLIISDFFGFVGTWLSYARLMALALA FT TSGIAMVINVLAGMVWGIKISVVPLGIVIGLIIFIGGQLFSTAINALGAFVHSLRLQYV FT EFFGTFYSGDGKPFEPFRARRVFSKLKLESGSE" FT gene 139695..140180 FT /gene="atpK" FT /locus_tag="TGAM_0142" FT /note="tg0142" FT CDS 139695..140180 FT /codon_start=1 FT /transl_table=11 FT /gene="atpK" FT /locus_tag="TGAM_0142" FT /product="Archaeal/vacuolar-type H+-ATPase, subunit K FT (atpK)" FT /EC_number="3.6.3.14" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A332" FT /db_xref="InterPro:IPR002379" FT /db_xref="UniProtKB/TrEMBL:C5A332" FT /inference="protein motif:COG:COG0636 F0F1-type ATP FT synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, FT subunit K; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.1.20.20.10 no FT description" FT /inference="protein motif:HMMPfam:PF00137 ATP-synt_C FT InterPro:IPR002379 ATPase, F0/V0 complex, subunit C" FT /inference="protein motif:superfamily:SSF81333 F1F0 ATP FT synthase subunit C" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32644.1" FT /translation="MDPIVYVSLGAALAAGLAGAASAFGVGIAGAAAAGAVAEDEKNFK FT NALILEGLPMTQSIYGLITLFLILLSAGIIGGGFKFAKPNMDNIVKSAILLGAGLTVGL FT TGLSAIPQGIIAGASIGAVAKNPKTFTQGIIFAAMAETMAIFGLVGALIMIATGVGL" FT gene 140218..140811 FT /gene="atpE" FT /locus_tag="TGAM_0143" FT /note="tg0143" FT CDS 140218..140811 FT /codon_start=1 FT /transl_table=11 FT /gene="atpE" FT /locus_tag="TGAM_0143" FT /product="Archaeal/vacuolar-type H+-ATPase, subunit E FT (atpE)" FT /EC_number="3.6.3.14" FT /db_xref="GOA:C5A333" FT /db_xref="InterPro:IPR002842" FT /db_xref="UniProtKB/Swiss-Prot:C5A333" FT /inference="protein motif:CDD:NtpE, Archaeal/vacuolar-type FT H+-ATPase subunit E [Energy production and conversion]" FT /inference="protein motif:CDD:vATP-synt_E, ATP synthase FT (E/31 kDa) subunit" FT /inference="protein motif:COG:COG1390 FT Archaeal/vacuolar-type H+-ATPase subunit E; C Energy FT production and conversion" FT /inference="protein motif:HMMPanther:PTHR11583 VACUOLAR ATP FT SYNTHASE SUBUNIT E InterPro:IPR002842 ATPase, V1/A1 FT complex, subunit E" FT /inference="protein motif:HMMPfam:PF01991 vATP-synt_E FT InterPro:IPR002842 ATPase, V1/A1 complex, subunit E" FT /inference="protein motif:superfamily:SSF81573 F1F0 ATP FT synthase subunit B, membrane domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32645.1" FT /translation="MEGAELIIQEIHREAEQKIQYILSEAQREAEKLKEEARKRAQSQA FT EWILRKAKTQAEIEKQRIIANAKLEVRRKKLAVQEELIGEVLSAMREKLAALPDDEYFE FT ALVSLTKEAIEELGTKKIVLRSNERTLKLIDSRMEEFSEKVGVEVSLGEPIECIGGVLV FT ESPDGTVRVDNTFDARIERLESELRATVAKALFG" FT gene 140817..141917 FT /gene="atpC" FT /locus_tag="TGAM_0144" FT /note="tg0144" FT CDS 140817..141917 FT /codon_start=1 FT /transl_table=11 FT /gene="atpC" FT /locus_tag="TGAM_0144" FT /product="Archaeal/vacuolar-type H+ ATPase, subunit C FT (atpC)" FT /EC_number="3.6.3.14" FT /db_xref="GOA:C5A334" FT /db_xref="InterPro:IPR002843" FT /db_xref="InterPro:IPR014272" FT /db_xref="UniProtKB/Swiss-Prot:C5A334" FT /inference="protein motif:CDD:NtpC, Archaeal/vacuolar-type FT H+-ATPase subunit C [Energy production and conversion]" FT /inference="protein motif:CDD:vATP-synt_AC39, ATP synthase FT (C/AC39) subunit" FT /inference="protein motif:COG:COG1527 FT Archaeal/vacuolar-type H+-ATPase subunit C; C Energy FT production and conversion" FT /inference="protein motif:HMMPfam:PF01992 vATP-synt_AC39 FT InterPro:IPR002843 ATPase, V0/A0 complex, subunit C/D" FT /inference="protein motif:superfamily:SSF47807 5' to 3' FT exonuclease, C-terminal subdomain InterPro:IPR008918 FT Helix-hairpin-helix motif, class 2" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32646.1" FT /translation="MGAETVTAILDTTLGVVFTWLGWKTAKIIRKYTPYSYPNARINAM FT EAKLLTGQRFNELAESRTLQNFIVNLEDTDYKVHLSGVTEDPLEIERAFERALASTYLL FT MEEILPKRVSGFFRLLLEEWDVRNIASVVKAKVRGEPAIDYVVEIGTMVPKVKAIAEAK FT TMEEILVILEGTPYEEHYQRLLLGEIDVDQFETELYKVYYSRLLEYATSRKEEERLILE FT EFVRTKIDIRNIVTLLRAKRAGLPGEVIKRHLIPGGSVKLDTALNVDDLGMALAELDST FT KYGKVLRDEREKIEKDLTLVEPVLQNHLLRRMEELTRFYPLSVATPLSYILKKEREIKK FT LRAMAKLIADGFEPEKIKEIIGEELA" FT gene 141914..142222 FT /gene="atpF" FT /locus_tag="TGAM_0145" FT /note="tg0145" FT CDS 141914..142222 FT /codon_start=1 FT /transl_table=11 FT /gene="atpF" FT /locus_tag="TGAM_0145" FT /product="Archaeal/vacuolar-type H+-ATPase, subunit F FT (atpF)" FT /EC_number="3.6.3.14" FT /db_xref="GOA:C5A335" FT /db_xref="InterPro:IPR008218" FT /db_xref="InterPro:IPR022944" FT /db_xref="UniProtKB/Swiss-Prot:C5A335" FT /inference="protein motif:CDD:ATP-synt_F, ATP synthase FT (F/14-kDa) subunit" FT /inference="protein motif:CDD:NtpG, Archaeal/vacuolar-type FT H+-ATPase subunit F [Energy production and conversion]" FT /inference="protein motif:COG:COG1436 FT Archaeal/vacuolar-type H+-ATPase subunit F; C Energy FT production and conversion" FT /inference="protein motif:HMMPanther:PTHR13861 VACUOLAR ATP FT SYNTHASE SUBUNIT F InterPro:IPR005772 ATPase, V1 complex, FT subunit F, eukaryotic" FT /inference="protein motif:HMMPfam:PF01990 ATP-synt_F FT InterPro:IPR008218 ATPase, V1/A1 complex, subunit F" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32647.1" FT /translation="MKIAVMGDPDTALGFKLAGAHEVYSFGSSPLEIERANNKLKELVE FT RDDIGIILITETLAQRVEVPEVEFPIILQIPDKSGSRFGEAQLREIVRRAIGVELKR" FT gene 142229..143986 FT /gene="atpA" FT /locus_tag="TGAM_0146" FT /note="tg0146" FT CDS 142229..143986 FT /codon_start=1 FT /transl_table=11 FT /gene="atpA" FT /locus_tag="TGAM_0146" FT /product="Archaeal/vacuolar-type H+-ATPase subunit A FT (atpA)" FT /EC_number="3.6.3.14" FT /db_xref="GOA:C5A336" FT /db_xref="InterPro:IPR000194" FT /db_xref="InterPro:IPR000793" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004100" FT /db_xref="InterPro:IPR005726" FT /db_xref="InterPro:IPR018118" FT /db_xref="InterPro:IPR020003" FT /db_xref="InterPro:IPR022878" FT /db_xref="InterPro:IPR024034" FT /db_xref="UniProtKB/Swiss-Prot:C5A336" FT /inference="protein motif:COG:COG1155 FT Archaeal/vacuolar-type H+-ATPase subunit A; C Energy FT production and conversion" FT /inference="protein motif:Gene3D:G3D.1.10.1140.10 no FT description" FT /inference="protein motif:Gene3D:G3D.2.40.30.20 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR15184 ATP FT SYNTHASES" FT /inference="protein motif:HMMPanther:PTHR15184:SF1 ATP FT SYNTHASE ALPHA SUBUNIT" FT /inference="protein motif:HMMPfam:PF00006 ATP-synt_ab FT InterPro:IPR000194 ATPase, F1/V1/A1 complex, alpha/beta FT subunit, nucleotide-binding" FT /inference="protein motif:HMMPfam:PF00306 ATP-synt_ab_C FT InterPro:IPR000793 ATPase, F1/V1/A1 complex, alpha/beta FT subunit, C-terminal" FT /inference="protein motif:HMMPfam:PF02874 ATP-synt_ab_N FT InterPro:IPR004100 ATPase, F1/V1/A1 complex, alpha/beta FT subunit, N-terminal" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase" FT /inference="protein motif:HMMTigr:TIGR01043 FT ATP_syn_A_arch:ATP synthase archaeal, InterPro:IPR005726 FT ATPase, A1 complex, alpha subunit" FT /inference="protein motif:ScanRegExp:PS00152 FT ATPASE_ALPHA_BETA InterPro:IPR000194 ATPase, F1/V1/A1 FT complex, alpha/beta subunit, nucleotide-binding" FT /inference="protein motif:superfamily:SSF47917 C-terminal FT domain of alpha and beta subunits of F1 ATP synthase FT InterPro:IPR000793 ATPase, F1/V1/A1 complex, alpha/beta FT subunit, C-terminal" FT /inference="protein motif:superfamily:SSF50615 N-terminal FT domain of alpha and beta subunits of F1 ATP synthase FT InterPro:IPR004100 ATPase, F1/V1/A1 complex, alpha/beta FT subunit, N-terminal" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32648.1" FT /translation="MGRIVRVTGPLVVADGMKGAKMYEVVRVGEMGLIGEIIRLEGDRA FT VIQVYEETAGIKPGEPVIGTGSSLSVELGPGLLTSMYDGIQRPLEKLRELSGDFIARGL FT TAPALPRDKKWHFTPTVKVGDRVTGGDILGVVPETSIIEHKILVPPWVEGEIVEIAEEG FT DYTVEEVIAKVKKPDGTIEELKMYHRWPVRVKRPYKNKLPPEVPLITGQRTIDTFFSIA FT KGGTAAIPGPFGSGKTVTQHQLAKWSDAQVVVYIGCGERGNEMTDVLEEFPKLKDPKTG FT KPLMERTVLIANTSNMPVAAREASIYTGITIAEYFRDQGYDVALMADSTSRWAEALREI FT SGRLEEMPGEEGYPAYLASKIAEFYERAGRVVTLGSEPRVGSVSVIGAVSPPGGDFSEP FT VVQNTLRVVKVFWALDADLARRRHFPAINWLRSYSLYLDAVQDWWHKNVDPEWRKMRDT FT AMALLQKEAELQEIVRIVGPDALPDREKAILIVTRMLREDYLQQDAFDEVDTYCPPKKQ FT VTMMRVILNFYNRTMEAVDRGVPVDEIARLPVREKIGRMKFEPDVEKIRALIDETNAQF FT EELFKKYGV" FT gene 143992..145383 FT /gene="atpB" FT /locus_tag="TGAM_0147" FT /note="tg0147" FT CDS 143992..145383 FT /codon_start=1 FT /transl_table=11 FT /gene="atpB" FT /locus_tag="TGAM_0147" FT /product="Archaeal/vacuolar-type H+-ATPase, subunit B FT (atpB)" FT /EC_number="3.6.3.14" FT /db_xref="GOA:C5A337" FT /db_xref="InterPro:IPR000194" FT /db_xref="InterPro:IPR000793" FT /db_xref="InterPro:IPR004100" FT /db_xref="InterPro:IPR005724" FT /db_xref="InterPro:IPR020003" FT /db_xref="InterPro:IPR022879" FT /db_xref="InterPro:IPR024034" FT /db_xref="UniProtKB/Swiss-Prot:C5A337" FT /inference="protein motif:COG:COG1156 FT Archaeal/vacuolar-type H+-ATPase subunit B; C Energy FT production and conversion" FT /inference="protein motif:Gene3D:G3D.1.10.1140.10 no FT description" FT /inference="protein motif:Gene3D:G3D.2.40.30.20 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR15184 ATP FT SYNTHASES" FT /inference="protein motif:HMMPanther:PTHR15184:SF2 ATP FT SYNTHASE SUBUNIT BETA" FT /inference="protein motif:HMMPfam:PF00006 ATP-synt_ab FT InterPro:IPR000194 ATPase, F1/V1/A1 complex, alpha/beta FT subunit, nucleotide-binding" FT /inference="protein motif:HMMPfam:PF00306 ATP-synt_ab_C FT InterPro:IPR000793 ATPase, F1/V1/A1 complex, alpha/beta FT subunit, C-terminal" FT /inference="protein motif:HMMPfam:PF02874 ATP-synt_ab_N FT InterPro:IPR004100 ATPase, F1/V1/A1 complex, alpha/beta FT subunit, N-terminal" FT /inference="protein motif:HMMTigr:TIGR01041 FT ATP_syn_B_arch:ATP synthase archaeal, InterPro:IPR005724 FT ATPase, A1 complex, beta subunit" FT /inference="protein motif:ScanRegExp:PS00152 FT ATPASE_ALPHA_BETA InterPro:IPR000194 ATPase, F1/V1/A1 FT complex, alpha/beta subunit, nucleotide-binding" FT /inference="protein motif:superfamily:SSF47917 C-terminal FT domain of alpha and beta subunits of F1 ATP synthase FT InterPro:IPR000793 ATPase, F1/V1/A1 complex, alpha/beta FT subunit, C-terminal" FT /inference="protein motif:superfamily:SSF50615 N-terminal FT domain of alpha and beta subunits of F1 ATP synthase FT InterPro:IPR004100 ATPase, F1/V1/A1 complex, alpha/beta FT subunit, N-terminal" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32649.1" FT /translation="MPGMEYSTVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQV FT LEARENLAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEI FT IPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAA FT QIARQAKVLGEEEQFAVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIER FT IITPRMALTVAEYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTD FT LATIYERAGRVRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIY FT PPIDVLPSLSRLMKDGIGKGRTREDHPQLSQQLYAAYAEGRSLRDLVAVVGEEALSETD FT RKYLKFADRFEREFVAQRYDEDRSIFETLDLGWELLAELPESELKRVRKEYILKYHPKY FT RKRGS" FT gene 145408..146052 FT /gene="atpD" FT /locus_tag="TGAM_0148" FT /note="tg0148" FT CDS 145408..146052 FT /codon_start=1 FT /transl_table=11 FT /gene="atpD" FT /locus_tag="TGAM_0148" FT /product="Archaeal/vacuolar-type H+-ATPase, subunit D FT (atpD)" FT /EC_number="3.6.3.14" FT /db_xref="GOA:C5A338" FT /db_xref="InterPro:IPR002699" FT /db_xref="UniProtKB/Swiss-Prot:C5A338" FT /inference="protein motif:BlastProDom:PD004122 FT VATD_PYRHO_O57731; InterPro:IPR002699 ATPase, V1/A1 FT complex, subunit D" FT /inference="protein motif:CDD:ATP-synt_D, ATP synthase FT subunit D" FT /inference="protein motif:COG:COG1394 FT Archaeal/vacuolar-type H+-ATPase subunit D; C Energy FT production and conversion" FT /inference="protein motif:HMMPanther:PTHR11671 VACUOLAR ATP FT SYNTHASE SUBUNIT D InterPro:IPR002699 ATPase, V1/A1 FT complex, subunit D" FT /inference="protein motif:HMMPanther:PTHR11671:SF2 V-ATP FT SYNTHASE SUBUNIT D" FT /inference="protein motif:HMMPfam:PF01813 ATP-synt_D FT InterPro:IPR002699 ATPase, V1/A1 complex, subunit D" FT /inference="protein motif:HMMTigr:TIGR00309 FT V_ATPase_subD:V-type ATPase, D subunit InterPro:IPR002699 FT ATPase, V1/A1 complex, subunit D" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32650.1" FT /translation="MAELLNVKPTRMELLNLKRRIQLAKKGHKLLKDKQDALIMEFFTI FT YDEALQLRRELNEKMGVAFETLTRAQIEAGTLPLREAALAVKPNKEVEIKRRNVMGVSV FT PLIEAEGFKRKASERGYAFVSTSPFVDIAAEKFEEVLDLAVRLAEVEETLKRLAREIET FT TKRRVNALEYIIIPRMEATVKFIKQRLDEMERENFFRLKRVKALIEARSGS" FT gene 146091..147308 FT /locus_tag="TGAM_0149" FT /note="tg0149" FT CDS 146091..147308 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0149" FT /product="Alanyl-tRNA synthetase-related protein FT (C-terminus)" FT /db_xref="GOA:C5A339" FT /db_xref="InterPro:IPR002318" FT /db_xref="InterPro:IPR003156" FT /db_xref="InterPro:IPR012947" FT /db_xref="InterPro:IPR018163" FT /db_xref="InterPro:IPR018164" FT /db_xref="InterPro:IPR018165" FT /db_xref="UniProtKB/TrEMBL:C5A339" FT /inference="protein motif:CDD:AlaS, Alanyl-tRNA synthetase FT [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:CDD:COG2872, Predicted FT metal-dependent hydrolases related to alanyl-tRNA FT synthetase HxxxH domain [General function prediction only]" FT /inference="protein motif:CDD:tRNA-synt_2c, tRNA FT synthetases class II (A)" FT /inference="protein motif:COG:COG2872 Predicted FT metal-dependent hydrolases related to alanyl-tRNA FT synthetase HxxxH domain; R General function prediction FT only" FT /inference="protein motif:HMMPanther:PTHR11777 ALANYL-TRNA FT SYNTHETASE" FT /inference="protein motif:HMMPanther:PTHR11777:SF2 FT ALANYL-TRNA SYNTHETASE" FT /inference="protein motif:HMMPfam:PF01411 tRNA-synt_2c FT InterPro:IPR002318 Alanyl-tRNA synthetase, class IIc FT GO:Molecular Function:alanine-tRNA ligase activity FT (GO:0004813), Molecular Function:ATP binding (GO:0005524), FT Biological Process:alanyl-tRNA aminoacylation (GO:0006419)" FT /inference="protein motif:HMMPfam:PF02272 DHHA1 FT InterPro:IPR003156 Phosphoesterase, DHHA1 GO:Molecular FT Function:nucleic acid binding (GO:0003676)" FT /inference="protein motif:HMMPfam:PF07973 tRNA_SAD FT InterPro:IPR012947 Threonyl/alanyl tRNA synthetase, SAD" FT /inference="protein motif:ProfileScan:PS50860 FT AA_TRNA_LIGASE_II_ALA InterPro:IPR002318 Alanyl-tRNA FT synthetase, class IIc GO:Molecular Function:alanine-tRNA FT ligase activity (GO:0004813), Molecular Function:ATP FT binding (GO:0005524), Biological Process:alanyl-tRNA FT aminoacylation (GO:0006419)" FT /inference="protein motif:superfamily:SSF55186 FT Threonyl-tRNA synthetase (ThrRS), second 'additional' FT domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32651.1" FT /translation="MTEKLFYRDPYLRETRAKVLHVEKLGDRVRLLLDRTIFYPEGGGQ FT PSDRGFIEGNGFRVLVDRVYGKDKIWHEGKLEGRFPEKGDEVRLTLDWEWRYENMRAHT FT GQHILSAVIKGLLGADTTGFQIFPEHGKIEIDYPGELSWELVNEIERKTNEIIWGDVEV FT EVEVYEELPGELSERLRKPLSEKVKPPIRIVKIGTVDVTPCGGTHVRSTREVGVLKVLN FT FYRKSRKLWRIEFATGNRALRALNEILKDYWGSLEEMPNKNRPLRERVIELRSELEKLE FT EEKSKLRRELWRWKAEALIKNARKIDGVRVITLVEEWPMKDAQAFAIYLVEHNPGTVVL FT IAGENYVVFAKSEKLDVSMRSLLRAVLAEVGGGGGGSDNLAKGGGFRVSPREVLDIAVK FT KLGELL" FT gene complement(147305..148135) FT /locus_tag="TGAM_0150" FT /note="tg0150" FT CDS complement(147305..148135) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0150" FT /product="P-loop ATPase, MJ1599 type" FT /db_xref="InterPro:IPR012121" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR018317" FT /db_xref="UniProtKB/TrEMBL:C5A340" FT /inference="protein motif:CDD:Alpha_ANH_like_I, This is a FT subfamily of Adenine nucleotide alpha hydrolases FT superfamily" FT /inference="protein motif:CDD:Alpha_ANH_like_II, This is a FT subfamily of Adenine nucleotide alpha hydrolases FT superfamily" FT /inference="protein motif:CDD:Alpha_ANH_like_III, This is a FT subfamily of Adenine nucleotide alpha hydrolases FT superfamily" FT /inference="protein motif:CDD:COG0603, Predicted PP-loop FT superfamily ATPase [General function prediction only]" FT /inference="protein motif:CDD:COG1606, ATP-utilizing FT enzymes of the PP-loop superfamily [General function FT prediction only]" FT /inference="protein motif:CDD:CysH, 3'-phosphoadenosine FT 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD FT synthetase and related enzymes [Amino acid transport and FT metabolism / Coenzyme metabolism]" FT /inference="protein motif:CDD:MesJ, Predicted ATPase of the FT PP-loop superfamily implicated in cell cycle control [Cell FT division and chromosome partitioning]" FT /inference="protein motif:CDD:PAPS_reductase, This domain FT is found in phosphoadenosine phosphosulphate (PAPS) FT reductase enzymes or PAPS sulphotransferase" FT /inference="protein motif:CDD:PP-ATPase, N-terminal domain FT of predicted ATPase of the PP-loop faimly implicated in FT cell cycle control [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:TrmU, Predicted FT tRNA(5-methylaminomethyl-2-thiouridylate) FT methyltransferase, contains the PP-loop ATPase domain FT [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:CDD:tRNA_Me_trans, tRNA methyl FT transferase" FT /inference="protein motif:COG:COG0037 Predicted ATPase of FT the PP-loop superfamily implicated in cell cycle control; D FT Cell cycle control, cell division, chromosome partitioning" FT /inference="protein motif:Gene3D:G3D.3.40.50.610 no FT description" FT /inference="protein motif:HMMPanther:PTHR11933 TRNA FT (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR11933:SF1 TRNA FT (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF06508 ExsB FT InterPro:IPR004479 ExsB GO:Molecular Function:molecular FT function unknown (GO:0005554)" FT /inference="protein motif:HMMPIR:PIRSF036668 Predicted FT P-loop ATPase, MJ1599 type InterPro:IPR012121 P-loop FT ATPase, MJ1599-related" FT /inference="protein motif:superfamily:SSF52402 Adenine FT nucleotide alpha hydrolases-like" FT /protein_id="ACS32652.1" FT /translation="MLKCSLCVNDERTAKIDIIDGKPICRECQVYLKHPVEGERIRKEL FT DELMKNVDKAIVAYSGGKDSVVALYLAKEVYKVPELEAVMIDHGLMAEEAIENARRIAE FT HLGVPFRVLRYDYSDIFRNALLKGQSPCRACSRRTMEKLRKYAIRKGYRYIITGHELPF FT GHHPYRLMSGGVIQIRLLSMMTEKERFEILKKLPFEFLELPGYTTNCLVLGPALELYWE FT KHGHSFEHRRIAALVRYGLMSRERAEKELQKPKVPEWQWEIVKKKLGIDFPRVP" FT gene complement(148172..148834) FT /locus_tag="TGAM_0151" FT /note="tg0151" FT CDS complement(148172..148834) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0151" FT /product="Conserved hypothetical protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A341" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32653.1" FT /translation="MMTMIVEKALSLALLSVFLGLNVMVGVARFTVGMGSSVWRRVLRV FT EIPENEKKGYEILYTVIWIAIGLWAFWKLKDKTLLGAVLGIFTFRSGSNLSKTLIYTVH FT DQRIVREYSNEGRLLSIIGRASTLSLLIEALFVVTLGIAYKTLSITLKSGMSAGNFLLY FT LWGAGFLFGLLFGWFVGRNNRGILMSNAFPILVFFMARTGKKKTEEVVRKPLERFRR" FT gene complement(148855..150225) FT /locus_tag="TGAM_0152" FT /note="tg0152" FT CDS complement(148855..150225) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0152" FT /product="ABC-type transport system, permease component" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A342" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:C5A342" FT /inference="protein motif:CDD:BPD_transp_1, FT Binding-protein-dependent transport system inner membrane FT component" FT /inference="protein motif:CDD:DppB, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:DppC, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:COG:COG1173 ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components; E Amino acid transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /protein_id="ACS32654.1" FT /translation="MTEKGERRSGIPRRVSIALLIVAAYIIASLVGPLTIRAEDLKNWN FT NLDYWDRNPKAKPPEWYGAFKGLPPSEWVRGEYRDGVFRFTYDFHYSLAPEDIVVIMNT FT TKSIEITMTTPDNETIKLFAGSPSLMNYTLHLKKNYPLFEELAEKRCGTKLTGESFFGK FT NVFNTVFSEPKEDCLTNPKPLHGKYVITIKAQDSPIIRAMYGGKIPKLEPNETIRVFIA FT GQSHGFLGTDIFGRDVWVGFLGGMGETLLIAFAGALISVSLGLLLGTLGAIGGKVGTGS FT NLASRFLTVLPTLPFAMVTIIALGTIELENRVYVIKVHSLSVALVLGILLIGNISRNVR FT SIVKEELRKGYIESSKALGGNLPWILKKHVSRILVPYGLEQLAITIPGVIALLTLLGFF FT NISPGFNWSSLMSQTIVYNAQYQFLWWLVLPIGFSMALLAISFVVIANWIEEEFIKM" FT gene complement(150218..151243) FT /locus_tag="TGAM_0153" FT /note="tg0153" FT CDS complement(150218..151243) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0153" FT /product="ABC-type transport system, permease component" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A343" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:C5A343" FT /inference="protein motif:CDD:DppB, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:COG:COG0601 ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components; E Amino acid transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:superfamily:SSF63999 Thiamin FT pyrophosphokinase, catalytic domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32655.1" FT /translation="MRIVRDLLFNLVLISLALLLTATVVAIAEEKADRVTLNTPVDLKT FT LSPEEMAQYEKYVNEITELKQRMDIESIKTRVRAYFRYLIKEFRGKKLWKTLKTIGLSF FT AVLTMTTLLIFAFGLYWGLKAGYKGGFWDRVLSALAPLFSGIPAWFWALLFVWTLWWKW FT DIGDISYTNSLMRAKAYGGAGIMAYLNALLLPVIALTLSNVVVYAFNVRNLVKREAFEE FT YFFIDGLKGLPDRRIMRKLLRTVLPSFLTFTSYNFLNLMMSAMAVEKLFEVPGIGKVLA FT DSVEVIYLPNEFGEPKIPHLHFDGFSIFFVAFVMAAFYFLNSTVLEALYLYLDPRREIN FT D" FT gene complement(151332..152243) FT /locus_tag="TGAM_0154" FT /note="tg0154" FT CDS complement(151332..152243) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0154" FT /product="Conserved hypothetical protein" FT /note="Belongs to Radical SAM family" FT /db_xref="GOA:C5A344" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/TrEMBL:C5A344" FT /inference="protein motif:CDD:COG0535, Predicted Fe-S FT oxidoreductases [General function prediction only]" FT /inference="protein motif:CDD:COG0731, Fe-S oxidoreductases FT [Energy production and conversion]" FT /inference="protein motif:CDD:COG2100, Predicted Fe-S FT oxidoreductase [General function prediction only]" FT /inference="protein motif:CDD:MoaA, Molybdenum cofactor FT biosynthesis enzyme [Coenzyme metabolism]" FT /inference="protein motif:CDD:Radical_SAM, Radical SAM FT superfamily" FT /inference="protein motif:COG:COG0535 Predicted Fe-S FT oxidoreductases; R General function prediction only" FT /inference="protein motif:HMMPanther:PTHR11228 PUTATIVE FT MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A" FT /inference="protein motif:HMMPfam:PF04055 Radical_SAM FT InterPro:IPR007197 Radical SAM GO:Molecular FT Function:catalytic activity (GO:0003824), Molecular FT Function:iron ion binding (GO:0005506)" FT /inference="protein motif:HMMSmart:SM00729 no description FT InterPro:IPR006638 Elongator protein 3/MiaB/NifB" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32656.1" FT /translation="MGIKMSWEDFARSMGVEPQILENKEARLLKKFVMDLKIPTHCQGC FT QGLDLSNPNPVHHPSYELTPACNHDCIFCYSNVAVKLGKAPKPGYYGWENPKAITVSQY FT GEPLLSPRIVEVNKMLRERFPEARLDLQTNGSLLTEELWEKLDFDLVMISLDASTREKH FT LKITNADTFDAVVNALRIVGSDESVRSVVRTIFMPGINDEDIPKIAELASSLGVDEMML FT QPLTIHELNVERLRKAGLDFDRAESVREFLKAAMEAKKYIDVRISGCQLVLYQKMDHLT FT LFSARRVARDVVPLVKRERNVT" FT gene 152297..152896 FT /locus_tag="TGAM_0155" FT /note="tg0155" FT CDS 152297..152896 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0155" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF207 family" FT /db_xref="InterPro:IPR003827" FT /db_xref="InterPro:IPR022908" FT /db_xref="UniProtKB/TrEMBL:C5A345" FT /inference="protein motif:CDD:COG1590, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:DUF207, Uncharacterized ACR, FT COG1590" FT /inference="protein motif:COG:COG1590 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPanther:PTHR18052 FT UNCHARACTERIZED InterPro:IPR003827 Protein of unknown FT function DUF207" FT /inference="protein motif:HMMPanther:PTHR18052:SF8 FT UNCHARACTERIZED" FT /inference="protein motif:HMMPfam:PF02676 DUF207 FT InterPro:IPR003827 Protein of unknown function DUF207" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32657.1" FT /translation="MGSENMGFLYIKNFDEQKARAMEGLRRALEEGKVDEDIITLLEKI FT NALENYFTTSSCSGRISVMEMPHFGDKVNSVWLGKWHREVTVEEVLEAVVRHSKGQLWF FT LVRSPILHVGARTLEDAVKLLNLAIGLGFKYSNIKSVSHKKLLVEIRSTERMDVPLGSD FT GELWVDEAYIEKIVTIANDQLRRFKRKLKRLEEEIE" FT gene 153225..154622 FT /locus_tag="TGAM_0156" FT /note="tg0156" FT CDS 153225..154622 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0156" FT /product="Site-specific DNA-methyltransferase FT (cytosine-N(4)-specific)" FT /EC_number="2.1.1.113" FT /db_xref="GOA:C5A346" FT /db_xref="InterPro:IPR002941" FT /db_xref="InterPro:IPR017985" FT /db_xref="UniProtKB/TrEMBL:C5A346" FT /inference="protein motif:COG:COG0863 DNA modification FT methylase; L Replication, recombination and repair" FT /inference="protein motif:Gene3D:G3D.3.30.70.730 no FT description" FT /inference="protein motif:HMMPfam:PF01555 N6_N4_Mtase FT InterPro:IPR002941 DNA methylase N-4/N-6 GO:Molecular FT Function:DNA binding (GO:0003677), Biological Process:DNA FT methylation (GO:0006306), Molecular FT Function:N-methyltransferase activity (GO:0008170)" FT /inference="protein motif:ScanRegExp:PS00093 N4_MTASE FT InterPro:IPR001091 Site-specific DNA-methyltransferase FT (cytosine-N4-specific) GO:Molecular Function:DNA binding FT (GO:0003677), Biological Process:DNA methylation FT (GO:0006306), Molecular Function:N-methyltransferase FT activity (GO:0008170)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32658.1" FT /translation="MHLRGRWETMTLDKWIHFKSSSVSEKKDIDSILTELSRKVSQKVT FT FVNNANEPIHRWFKFPAGFSASLVRNSINIFRITSKDTILDPFTGSGTVNVEAKRLGIT FT SVGVEAHPLVAKIAQIKTYWEFEPKELYTHVTSIINDIERKLNSKRILHDYEDQIMKSP FT KLLLKVYPPETLARLYFIRDYITHTNIDDHIRDFLLLALLGILREVTDVDVGWPYILPK FT KKKRIAKPVMEAFRERVLLMYHDLKEVKEQVQNPAMAEIYNFDSRFLAKIINENSIDFI FT FTSPPYLNNYDYADRTRLELYFLGWCTSWRDITEKIRRRLMIAATTQVQRSKMRNIKLS FT GLIPPEVTDELNEKISQLAQEREKRSGKKDYDLMVLGYFNDISRILSQMYAVLKPKKYA FT VIIVGDSAPYGVYIPTHEYIAKISKFVGFSDYRILLLRERGKRWKAIKGIRRHNIDLGE FT YMVVLKK" FT gene complement(154633..155751) FT /locus_tag="TGAM_0157" FT /note="tg0157" FT CDS complement(154633..155751) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0157" FT /product="Hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A347" FT /inference="protein motif:superfamily:SSF49401 Bacterial FT adhesins InterPro:IPR008966 Bacterial adhesion" FT /protein_id="ACS32659.1" FT /translation="MRGCYEEVRETLEEAISKLNNKNIRINKDPPWIIVSLRSQPKAYL FT YVNCNKEILKVFLCLNKEKTPDCILVYDTKSEVNKEVLSNRLKILLKVATNSNYASTLG FT EDLGRILEDSIHEILLEFSKKHKNVKVSREEKWKDRDGDEHKLDFIIYVNNKPVVVLES FT KFLRYKKHMRDKGSRVIDSLTEIRKRYPSIAMAIAILVGNWTKGSLKAMDHKKIKTITL FT PLEKFSEIFKKFKIEINWDEKDRVTPFLSLLKLKMILNKEEFSDVVLLDNISYTSDPLT FT NIKEDIKKQISKPLFKLLDEAINPDNEKIEKINIDIYTNIGRIISLDTQNINEARMFLD FT CIADTKNISSLIDKITKQKLKTQQEKIDKYLK" FT gene complement(155843..156658) FT /locus_tag="TGAM_0158" FT /note="tg0158" FT CDS complement(155843..156658) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0158" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF1464 family" FT /db_xref="InterPro:IPR009927" FT /db_xref="UniProtKB/TrEMBL:C5A348" FT /inference="protein motif:CDD:COG2441, Predicted butyrate FT kinase [Energy production and conversion]" FT /inference="protein motif:CDD:DUF1464, Protein of unknown FT function (DUF1464)" FT /inference="protein motif:COG:COG2441 Predicted butyrate FT kinase; C Energy production and conversion" FT /inference="protein motif:HMMPfam:PF07318 DUF1464 FT InterPro:IPR009927 Protein of unknown function DUF1464" FT /inference="protein motif:superfamily:SSF53067 Actin-like FT ATPase domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32660.1" FT /translation="MKEIPVLLGLQEMVDQMAQKGMNVWFIPGVIHLPTVPEWRKYNRV FT DMGTADKMAITVLGIYDQAKRLGLEYSEVSFVLLEVGFGYNYAGAVKGGKIVDGIGGTI FT FPGPAYVNSGALDGEVAYLMGRIKKWHLFWGGATVIAANEILPPEEFAKRLDEEPFSKA FT WEAMKDGFIKAVASELAVVGDAKEIILSGRLMRIDELRKDVEDTFEELFDLPVVRQRGL FT EGKAKEAAQGSAIIGDGLVGGQFRELVEHVEIKKSRGSVLDYVKLPLDV" FT gene complement(157054..158694) FT /gene="thsA-1" FT /locus_tag="TGAM_0159" FT /note="tg0159" FT CDS complement(157054..158694) FT /codon_start=1 FT /transl_table=11 FT /gene="thsA-1" FT /locus_tag="TGAM_0159" FT /product="Thermosome alpha subunit (Thermosome subunit 1) FT (Chaperonin alpha subunit) (thsA)" FT /db_xref="GOA:C5A349" FT /db_xref="InterPro:IPR002194" FT /db_xref="InterPro:IPR002423" FT /db_xref="InterPro:IPR012714" FT /db_xref="InterPro:IPR017998" FT /db_xref="UniProtKB/TrEMBL:C5A349" FT /inference="protein motif:COG:COG0459 Chaperonin GroEL FT (HSP60 family); O Posttranslational modification, protein FT turnover, chaperones" FT /inference="protein motif:FPrintScan:PR00298 CHAPERONIN60 FT InterPro:IPR001844 Chaperonin Cpn60 GO:Molecular FT Function:protein binding (GO:0005515), Molecular FT Function:ATP binding (GO:0005524), Biological FT Process:cellular protein metabolism (GO:0044267)" FT /inference="protein motif:FPrintScan:PR00304 TCOMPLEXTCP1 FT InterPro:IPR002423 Chaperonin Cpn60/TCP-1 GO:Molecular FT Function:protein binding (GO:0005515), Molecular FT Function:ATP binding (GO:0005524), Biological FT Process:cellular protein metabolism (GO:0044267)" FT /inference="protein motif:Gene3D:G3D.1.10.560.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11353 T-COMPLEX FT PROTEIN 1-RELATED InterPro:IPR002423 Chaperonin Cpn60/TCP-1 FT GO:Molecular Function:protein binding (GO:0005515), FT Molecular Function:ATP binding (GO:0005524), Biological FT Process:cellular protein metabolism (GO:0044267)" FT /inference="protein motif:HMMPanther:PTHR11353:SF2 FT T-COMPLEX PROTEIN 1-RELATED" FT /inference="protein motif:HMMPfam:PF00118 Cpn60_TCP1 FT InterPro:IPR002423 Chaperonin Cpn60/TCP-1 GO:Molecular FT Function:protein binding (GO:0005515), Molecular FT Function:ATP binding (GO:0005524), Biological FT Process:cellular protein metabolism (GO:0044267)" FT /inference="protein motif:HMMTigr:TIGR02339 FT thermosome_arch:thermosome, various InterPro:IPR012714 FT Thermosome, archaeal" FT /inference="protein motif:ScanRegExp:PS00750 TCP1_1 FT InterPro:IPR002194 Chaperonin TCP-1" FT /inference="protein motif:ScanRegExp:PS00751 TCP1_2 FT InterPro:IPR002194 Chaperonin TCP-1" FT /inference="protein motif:ScanRegExp:PS00995 TCP1_3 FT InterPro:IPR002194 Chaperonin TCP-1" FT /inference="protein motif:superfamily:SSF48592 GroEL FT equatorial domain-like InterPro:IPR008950 GroEL-like FT chaperone, ATPase GO:Molecular Function:ATP binding FT (GO:0005524), Biological Process:protein folding FT (GO:0006457), Molecular Function:unfolded protein binding FT (GO:0051082)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32661.1" FT /translation="MAQLAGQPVVILPEGTQRYVGRDAQRLNILAARIVAETIRTTLGP FT KGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIA FT GELLKKAEELLDQNIHPSIIIKGYALAAEKAQEILEGMAKDVSPEDVETLKKAAVTAIT FT GKAAEEEREYLAEIAVEAVRQVAEKVGDKYKVDLDNIKFEKKEGGSVKDTKLIRGVVID FT KEVVHPGMPRRVENAKIALINEALEVKETETDAEIRITSPEQLQAFLEQEERMLKEMVD FT KIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLT FT PEDLGEAELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVK FT DIVEDGKILPAGGAPEIELAIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLD FT PVETLVKVIAAHKEKGPTIGVDVFEGEPADMMEKGVIAPLRVTKQAIKSASEAAIMILR FT IDDVIAASKLEKDKEGGKGGSEDFSSDLD" FT gene complement(158799..159539) FT /gene="nrdG" FT /locus_tag="TGAM_0160" FT /note="tg0160" FT CDS complement(158799..159539) FT /codon_start=1 FT /transl_table=11 FT /gene="nrdG" FT /locus_tag="TGAM_0160" FT /product="Anaerobic ribonucleotide triphosphate reductase FT activating enzyme (NrdG)" FT /EC_number="1.97.-.-" FT /db_xref="GOA:C5A350" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR012840" FT /db_xref="UniProtKB/TrEMBL:C5A350" FT /inference="protein motif:CDD:PflA, Pyruvate-formate FT lyase-activating enzyme [Posttranslational modification, FT protein turnover, chaperones]" FT /inference="protein motif:COG:COG1180 Pyruvate-formate FT lyase-activating enzyme; O Posttranslational modification, FT protein turnover, chaperones" FT /inference="protein motif:HMMPfam:PF04055 Radical_SAM FT InterPro:IPR007197 Radical SAM GO:Molecular FT Function:catalytic activity (GO:0003824), Molecular FT Function:iron ion binding (GO:0005506)" FT /inference="protein motif:HMMTigr:TIGR02495 NrdG2:anaerobic FT ribonucleoside-triphosphate InterPro:IPR012840 FT Ribonucleoside-triphosphate reductase, anaerobic-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32662.1" FT /translation="MLTSGWKSVSMVDVHGKVTFTLWLCGCNLRCPFCHNWRIAEGLDC FT FPLDEKALLDELEASAFLIDYFHVTGGEPLVQWRELGSLFAGVKLLDVPISLNTNLTLV FT GPLEKLLKADLVNHIATDLKAPTALYGLPEKASLTLWKLFLRGLEVVSDYGVPLELRIP FT VARNLEQWPYIEEGLRRIKTDFYVVLNPLVGRPLTNPRNEAWCSEHCWPAKEVEELREK FT LEGLGIEVYVNQFGTPNDTKLKGI" FT gene complement(159561..161414) FT /gene="nrdD" FT /locus_tag="TGAM_0161" FT /note="tg0161" FT CDS complement(159561..161414) FT /codon_start=1 FT /transl_table=11 FT /gene="nrdD" FT /locus_tag="TGAM_0161" FT /product="Anaerobic ribonucleoside triphosphate reductase FT (nrdD)" FT /EC_number="1.17.4.2" FT /db_xref="GOA:C5A351" FT /db_xref="InterPro:IPR012833" FT /db_xref="UniProtKB/TrEMBL:C5A351" FT /inference="protein motif:CDD:NrdD, Oxygen-sensitive FT ribonucleoside-triphosphate reductase [Nucleotide transport FT and metabolism]" FT /inference="protein motif:CDD:RNR_3, RNR, class III" FT /inference="protein motif:COG:COG1328 Oxygen-sensitive FT ribonucleoside-triphosphate reductase; F Nucleotide FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.70.20 no FT description" FT /inference="protein motif:HMMTigr:TIGR02487 NrdD:anaerobic FT ribonucleoside-triphosphate InterPro:IPR012833 FT Ribonucleoside-triphosphate reductase, anaerobic" FT /inference="protein motif:ScanRegExp:PS00024 HEMOPEXIN FT InterPro:IPR000585 Hemopexin" FT /inference="protein motif:superfamily:SSF51998 PFL-like FT glycyl radical enzymes" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32663.1" FT /translation="MVEMETMKRDIIQEYAGWSSLDVLENANRYPGPTGFFAYVMEEAL FT KESLSLVPKEGREAHFSGDIYIHKLPYSLYIPYCTGHSTARLLEKGLKTPTIVSRPARH FT FDTYVDHIANYLITMQHYFSGAQALSSVEWYAGPFIRKEGLDRRKIRQQIQRLVYNLNY FT PSRVGMQTPFTNFTVTLDAPKKMLEGDHAVYAGERVEPLGEYEREAKDFFIALTEVLRE FT GDALGQPFTFPIPTLMVTAKMLWDDPEIFEAVFATASKRGSFYWLNTNVVDPDASYAMC FT CRIAIDKTEMAFAFGVSGKSAEEEALERLERGRFGGLWAMPDVTGSVNVTTVNLPRLAL FT KARGNDDKFWEEYEKVLGVVRKTTDWFRERYVRLITSYKHMYSMIHLYLEEFPGSHFNT FT VGILGLPEAASIYLNEPKLWEEGTRKDWLRAAELMKEMVEFATAKAREWMRETGTPWNV FT EEVPGESAAAKLAIKDMREFPELKEYLSDPENPIYSTSVAPYYGALELADRIRVEEKVQ FT KSFTGGVMMHIFLGEEPDPEALAKLTKRLMRTELVYWSYTPAITVCNACGYSTTGLYTH FT CPRCGSENVEVWSRIIGYYRPLKNWNPFRKKEFWTRRHYSS" FT gene 161705..162727 FT /locus_tag="TGAM_0162" FT /note="tg0162" FT CDS 161705..162727 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0162" FT /product="Conserved hypothetical protein" FT /note="Contains TPR-repeat domain" FT /db_xref="GOA:C5A352" FT /db_xref="InterPro:IPR001440" FT /db_xref="InterPro:IPR011717" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:C5A352" FT /inference="protein motif:COG:COG0457 FOG:TPR repeat; R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.1.25.40.10 no FT description InterPro:IPR011990 Tetratricopeptide-like FT helical GO:Molecular Function:binding (GO:0005488)" FT /inference="protein motif:HMMPanther:PTHR10098 RAPSYNOID" FT /inference="protein motif:HMMPanther:PTHR10098:SF6 FT RAPSYNOID" FT /inference="protein motif:HMMPfam:PF00515 TPR_1 FT InterPro:IPR001440 Tetratricopeptide TPR_1" FT /inference="protein motif:HMMPfam:PF07719 TPR_2 FT InterPro:IPR013105 Tetratricopeptide TPR_2" FT /inference="protein motif:HMMSmart:SM00028 no description FT InterPro:IPR013026 Tetratricopeptide region" FT /inference="protein motif:ProfileScan:PS50005 TPR FT InterPro:IPR013026 Tetratricopeptide region" FT /inference="protein motif:ProfileScan:PS50293 TPR_REGION FT InterPro:IPR013026 Tetratricopeptide region" FT /inference="protein motif:superfamily:SSF48452 TPR-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32664.1" FT /translation="MNVKEEWERALSEKDCEKLLELFDDYIDAIETEEELREELKRLGE FT VAVQCDDPYDLLHEIGHVYAHLDDVESAIELYRRVVERKKDDPEEYATALYYLADAYEH FT FGMPEKAIETYQKLLEHEENVLKNDKEIALTLANLAVNYDELGETEKAIELMEHAKEIF FT ERIGDEKNRLISLLDLAHFHYELGNYDTAEALINEVLRNPRDDEIEINAKLVEAEIHAG FT REDYDKAFRALREALLKAINVSDDIFGVVFDTLVDFIEGLFNEGEYDTIARNMEAFAEL FT FEDDTAYFFRAIAELARWRAGDDEAKKRFDELYTKVENEELRSILDEWKRPKLSLSLGL FT " FT gene complement(162724..162960) FT /locus_tag="TGAM_0163" FT /note="tg0163" FT CDS complement(162724..162960) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0163" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR019270" FT /db_xref="UniProtKB/TrEMBL:C5A353" FT /inference="protein motif:CDD:COG5428, Uncharacterized FT conserved small protein [Function unknown]" FT /inference="protein motif:COG:COG5428 Uncharacterized FT conserved small protein; S Function unknown" FT /protein_id="ACS32665.1" FT /translation="MDSNMKIRYDPKADILYILLKEGPVADTDEVDEDIWFEYDEQGNV FT IGIEIWNAGENVIRRSLLEIERYAKGLKEEAKT" FT gene complement(162938..163240) FT /locus_tag="TGAM_0164" FT /note="tg0164" FT CDS complement(162938..163240) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0164" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A354" FT /protein_id="ACS32666.1" FT /translation="MLMSKIILSEHAKLRLRERKIEIDEVHNVMEFPEMKFYDLKSGHF FT IAIGRRSVPNHWLILAYDDYGDVIEVITIIDTSKSLERGLLRKGRRLGGGFEYED" FT gene complement(163315..163590) FT /gene="aeF1-B" FT /locus_tag="TGAM_0165" FT /note="tg0165" FT CDS complement(163315..163590) FT /codon_start=1 FT /transl_table=11 FT /gene="aeF1-B" FT /locus_tag="TGAM_0165" FT /product="Translation elongation factor aEF-1, subunit beta FT (aeF1-B)" FT /db_xref="GOA:C5A355" FT /db_xref="InterPro:IPR004542" FT /db_xref="InterPro:IPR014038" FT /db_xref="InterPro:IPR014717" FT /db_xref="UniProtKB/Swiss-Prot:C5A355" FT /inference="protein motif:CDD:EF1B, Elongation factor 1 FT beta (EF1B) guanine nucleotide exchange domain" FT /inference="protein motif:COG:COG2092 Translation FT elongation factor EF-1beta; J Translation, ribosomal FT structure and biogenesis" FT /inference="protein motif:Gene3D:G3D.3.30.70.60 no FT description" FT /inference="protein motif:HMMPfam:PF00736 EF1_GNE FT InterPro:IPR001326 Elongation factor 1, beta/beta'/delta FT chain GO:Molecular Function:translation elongation factor FT activity (GO:0003746), Cellular Component:eukaryotic FT translation elongation factor 1 complex (GO:0005853), FT Biological Process:translational elongation (GO:0006414)" FT /inference="protein motif:HMMTigr:TIGR00489 FT aEF-1_beta:translation elongation factor InterPro:IPR004542 FT Translation elongation factor aEF-1 beta GO:Molecular FT Function:translation elongation factor activity FT (GO:0003746), Biological Process:translational elongation FT (GO:0006414)" FT /inference="protein motif:superfamily:SSF54984 FT eEF-1beta-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32667.1" FT /translation="MSDYNMVAVVKVMPTDPEVNLDELEAKLKEVLPEKFGLAKVEREP FT IAFGLVALKFYVLAKDEEGYDLDQVLEAFRQVENVESAEVETVSRI" FT gene complement(163608..163802) FT /locus_tag="TGAM_0166" FT /note="tg0166" FT CDS complement(163608..163802) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0166" FT /product="Nucleic acid-binding protein, containing OB-fold FT domain" FT /db_xref="InterPro:IPR011668" FT /db_xref="UniProtKB/TrEMBL:C5A356" FT /inference="protein motif:CDD:COG2888, Predicted Zn-ribbon FT RNA-binding protein with a function in translation FT [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:COG:COG2888 Predicted Zn-ribbon FT RNA-binding protein with a function in translation; J FT Translation, ribosomal structure and biogenesis" FT /inference="protein motif:Gene3D:G3D.2.10.110.10 no FT description" FT /inference="protein motif:HMMPfam:PF07754 DUF1610 FT InterPro:IPR011668 Protein of unknown function DUF1610" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32668.1" FT /translation="MEVFAVEMKFEIPVCTSCGKEITPREHATHFVCPNCGEAIIWRCE FT SCRVLSVPYKCPKCGWEGP" FT gene complement(163927..164469) FT /locus_tag="TGAM_0167" FT /note="tg0167" FT CDS complement(163927..164469) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0167" FT /product="Transcription regulator, Lrp-AsnC family" FT /db_xref="GOA:C5A357" FT /db_xref="InterPro:IPR000485" FT /db_xref="InterPro:IPR002831" FT /db_xref="InterPro:IPR011008" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR019887" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:C5A357" FT /inference="protein motif:CDD:AsnC_trans_reg, AsnC family" FT /inference="protein motif:CDD:HTH_ASNC, helix_turn_helix FT ASNC type; AsnC:an autogenously regulated activator of FT asparagine synthetase A transcription in Escherichia coli)" FT /inference="protein motif:CDD:Lrp, Transcriptional FT regulators [Transcription]" FT /inference="protein motif:COG:COG1522 Transcriptional FT regulators; K Transcription" FT /inference="protein motif:FPrintScan:PR00033 HTHASNC FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMPanther:PTHR10277 HOMOCITRATE FT SYNTHASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10277:SF13 FT 2-ISOPROPYLMALATE SYNTHASE-RELATED" FT /inference="protein motif:HMMPfam:PF01037 AsnC_trans_reg FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:HMMPfam:PF02954 HTH_8 FT InterPro:IPR002197 Helix-turn-helix, Fis-type GO:Molecular FT Function:transcription factor activity (GO:0003700), FT Biological Process:regulation of transcription, FT DNA-dependent (GO:0006355)" FT /inference="protein motif:HMMSmart:SM00344 no description FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:ProfileScan:PS50116 FT HTH_FIS_FAMILY InterPro:IPR002197 Helix-turn-helix, FT Fis-type GO:Molecular Function:transcription factor FT activity (GO:0003700), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:ProfileScan:PS50956 HTH_ASNC_2 FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /inference="protein motif:superfamily:SSF54909 Dimeric FT alpha+beta barrel InterPro:IPR011008 Dimeric alpha-beta FT barrel" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32669.1" FT /translation="MPLGSKKTLNNKERPRYKGSSCTNDGEGKGMPGLLDDIDMKLLEE FT LRKNARENIATLSKKIGIPRTTVHYRIKKLVEEGVIEKFTIKPNYKKLDLGTTAFILAR FT YDPESGINQREVAKRVATLDGVYEVHIITGEWDLLIKVRAKNSEEIGKIVIDKLREIKG FT IGQTVTMVSFVSVKEEI" FT gene complement(164438..164992) FT /locus_tag="TGAM_0168" FT /note="tg0168" FT CDS complement(164438..164992) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0168" FT /product="Nucleoside triphosphate phosphohydrolase" FT /note="Belongs to rdgB/HAM1 family" FT /db_xref="GOA:C5A358" FT /db_xref="InterPro:IPR002637" FT /db_xref="InterPro:IPR020922" FT /db_xref="UniProtKB/TrEMBL:C5A358" FT /inference="protein motif:CDD:COG0127, Xanthosine FT triphosphate pyrophosphatase [Nucleotide transport and FT metabolism]" FT /inference="protein motif:CDD:HAM1, NTPase/HAM1" FT /inference="protein motif:CDD:Ham1p_like, Ham1 family" FT /inference="protein motif:CDD:Maf_Ham1, Maf_Ham1" FT /inference="protein motif:COG:COG0127 Xanthosine FT triphosphate pyrophosphatase; F Nucleotide transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.90.950.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11067 FT NUCLEOSIDE-TRIPHOSPHATASE InterPro:IPR002637 Ham1-like FT protein GO:Molecular Function:hydrolase activity FT (GO:0016787)" FT /inference="protein motif:HMMPanther:PTHR11067:SF1 FT NUCLEOSIDE-TRIPHOSPHATASE" FT /inference="protein motif:HMMPfam:PF01725 Ham1p_like FT InterPro:IPR002637 Ham1-like protein GO:Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:HMMTigr:TIGR00042 FT TIGR00042:non-canonical purine NTP pyropho FT InterPro:IPR002637 Ham1-like protein GO:Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:superfamily:SSF52972 Maf/Ham1" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32670.1" FT /translation="MRLAFITSNPGKVEEAKRYFEPLGVEVYQLHMSYPEIQADTLEEV FT AEYGARWLAGRIDGPFFLDDSGLFVEALKGFPGVYSAYVYKTLGYWGILKLLEGESNRK FT AYFKSVIAYWDGELHIFRGKVDGKITEEPRGSGGFGFDPVFIPEGFDRTFAEMTTEEKN FT AISHRGRALKAFATWLKENLK" FT gene complement(165034..165522) FT /locus_tag="TGAM_0169" FT /note="tg0169" FT CDS complement(165034..165522) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0169" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF355 family" FT /db_xref="InterPro:IPR007153" FT /db_xref="UniProtKB/TrEMBL:C5A359" FT /inference="protein motif:CDD:COG1839, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:DUF355, Protein of unknown FT function (DUF355)" FT /inference="protein motif:COG:COG1839 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF04008 DUF355 FT InterPro:IPR007153 Protein of unknown function DUF355" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32671.1" FT /translation="MVKIEVVDIEKPEGVEVIIGQGNFSIFTVDDLARALLTAVPGIKF FT GIAMNEAKPQLTRYTGNDKELEELAARNAVRIGAGHVFVILMKNAFPINVLNTIKNHPA FT VAMVYGASENPFQVIVAETELGRSVLGIVDGKAANKIESEEQKRERRELVEKIGYTID" FT gene 165574..166494 FT /locus_tag="TGAM_0170" FT /note="tg0170" FT CDS 165574..166494 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0170" FT /product="Putative transcription regulator" FT /note="Contains 1 Winged helix DNA-binding domain" FT /db_xref="InterPro:IPR005471" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A360" FT /inference="protein motif:COG:COG1522 Transcriptional FT regulators; K Transcription" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /protein_id="ACS32672.1" FT /translation="MGMQDVNPDEIELLVELLNKYPVESLKKIAELEGLDYHKLTRIYD FT KYYGKYVFVNAMYDIKKIGLKSYIAYLSVPRERLREVALRMKQNPFFVDITAMFGFKNG FT ITAIVYVPKEQVDLLDQVMEKYSDDYEYYEVRAYPPSGDDNFGEWNLPYQYAILMDILK FT WDARTPLSEIARELGKSRPTVRFMIRTLQHRGILLGYIATIENTEHDRGVTGITSELNE FT EVLEKFKDYEINVGVLVGRGYLLEWYFSSKEDLAQKLFEFSGYVEQLGIEYFDLLADIK FT EMYPKERLRRMVRKDGEGYRSILEF" FT gene complement(166491..167468) FT /locus_tag="TGAM_0171" FT /note="tg0171" FT CDS complement(166491..167468) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0171" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR023885" FT /db_xref="UniProtKB/TrEMBL:C5A361" FT /inference="protein motif:COG:COG0535 Predicted Fe-S FT oxidoreductases; R General function prediction only" FT /protein_id="ACS32673.1" FT /translation="MDAYSSTVVLMEEIVKVSTISTQEIKPRVEDIVVGKPPWSETPHA FT GSVERLILQLGAGRGRFNELYGIPRSIGCIGNNRFVLRRKKLGREEIEKILRDFKSMGG FT TEVWITNYDSPEELNEAVEMAFKVGIEEIRAVFLFEDAEKIRPLDGVEYIAELEYDPEA FT IISAAMRLWIRGILVMVTPDKVNEAKEFIQKVKGDGDFKAYVDVLYPRSLRHLDFNTIE FT LRKINNPTTSKYHDCLAGTVAVSGDGFVLPCPLLRNLVVGDVREKSFKWIVGRSKKLRE FT FWTMTKDKVDGCSTCPLRYICHDCRALEYQASGDLRGIEYCPLL" FT gene complement(167534..168274) FT /gene="moaE" FT /locus_tag="TGAM_0172" FT /note="tg0172" FT CDS complement(167534..168274) FT /codon_start=1 FT /transl_table=11 FT /gene="moaE" FT /locus_tag="TGAM_0172" FT /product="moaE molybdopterin synthase, large chain (moaE)" FT /db_xref="GOA:C5A362" FT /db_xref="InterPro:IPR003448" FT /db_xref="UniProtKB/TrEMBL:C5A362" FT /inference="protein motif:CDD:MoaE, MoaE family" FT /inference="protein motif:CDD:MoaE, MoaE protein" FT /inference="protein motif:COG:COG0314 Molybdopterin FT converting factor, large subunit; H Coenzyme transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.30.70.820 no FT description" FT /inference="protein motif:HMMPanther:PTHR10311 FT MOLYBDOPTERIN CONVERTING FACTOR InterPro:IPR003448 FT Molybdopterin biosynthesis MoaE GO:Biological FT Process:Mo-molybdopterin cofactor biosynthesis FT (GO:0006777)" FT /inference="protein motif:HMMPanther:PTHR10311:SF1 FT MOLYBDOPTERIN CONVERTING FACTOR" FT /inference="protein motif:HMMPfam:PF02391 MoaE FT InterPro:IPR003448 Molybdopterin biosynthesis MoaE FT GO:Biological Process:Mo-molybdopterin cofactor FT biosynthesis (GO:0006777)" FT /inference="protein motif:superfamily:SSF54690 FT Molybdopterin synthase subunit MoaE" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32674.1" FT /translation="MVVVVGVSAGQDVVKWDEDEVVEGETVEEVWDVDDVKDPEEELEE FT SLEPIKQPEVKTMITKARAMSLSLTLSPIKPLPRPQKCCGQILKGKDKGKTVVEMSKVK FT ITGEPFSVDEAIKLVERDEAGGYVVFLGKVRNENRGRRVLKLIYEAYEEMALKEMEKIR FT KEALEKFPILDMLIWHRVGELKVGEDTILIVASAKHRSEAFDACRWAIDEVKKRVPVWK FT KEVTEEGTFWIEGEQTIPEDYHKA" FT gene 168054..168932 FT /locus_tag="TGAM_0173" FT /note="tg0173" FT CDS 168054..168932 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0173" FT /product="Hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A363" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32675.1" FT /translation="MGDKVRDKLIALALVIIVFTSGCLMGSKDSSSSSSGSFTSSTSQT FT SSTVSPSTTSSSSHFTTSWPAETPTTTTTTLDYLAGLLDSLSRVSSYLALVNTTINSTV FT RIEGQAVVRVENVSVFSNSTAFYDLSNRRMEVNMTVLTKPAGARVLTRIILLGDVARVY FT SLGEWREFRRGEDGFTVIEKTFESNPLALALEASKDGSCQVTRGRYYVLHCTSKNAFEE FT LIKSSVGAPEGSEVSVTLGRVEVFFRDSQPVGGRIEVGFSVSTTYTDASGETFRLVQRG FT KIVETFTVVHT" FT gene complement(168929..169624) FT /gene="moeB" FT /gene_synonym="thiF" FT /locus_tag="TGAM_0174" FT /note="tg0174" FT CDS complement(168929..169624) FT /codon_start=1 FT /transl_table=11 FT /gene="moeB" FT /gene_synonym="thiF" FT /locus_tag="TGAM_0174" FT /product="Molybdopterin or thiamine synthase protein FT (moeB/thiF)" FT /db_xref="GOA:C5A364" FT /db_xref="InterPro:IPR000594" FT /db_xref="InterPro:IPR007901" FT /db_xref="InterPro:IPR009036" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A364" FT /inference="protein motif:CDD:Aos1_SUMO, Ubiquitin FT activating enzyme (E1) subunit Aos1" FT /inference="protein motif:CDD:APPBP1_RUB, Ubiquitin FT activating enzyme (E1) subunit APPBP1" FT /inference="protein motif:CDD:COG1179, FT Dinucleotide-utilizing enzymes involved in molybdopterin FT and thiamine biosynthesis family 1 [Coenzyme metabolism]" FT /inference="protein motif:CDD:E1-1_like, Ubiquitin FT activating enzyme (E1), repeat 1-like" FT /inference="protein motif:CDD:E1-2_like, Ubiquitin FT activating enzyme (E1), repeat 2-like" FT /inference="protein motif:CDD:E1_enzyme_family, Superfamily FT of activating enzymes (E1) of the ubiquitin-like proteins" FT /inference="protein motif:CDD:E1_ThiF_like, E1_ThiF_like" FT /inference="protein motif:CDD:MoeZ_MoeB, MoeZ/MoeB domain" FT /inference="protein motif:CDD:ThiF, Dinucleotide-utilizing FT enzymes involved in molybdopterin and thiamine biosynthesis FT family 2 [Coenzyme metabolism]" FT /inference="protein motif:CDD:ThiF, ThiF family" FT /inference="protein motif:CDD:ThiF_MoeB_HesA_family, FT ThiF_MoeB_HesA" FT /inference="protein motif:CDD:Uba2_SUMO, Ubiquitin FT activating enzyme (E1) subunit UBA2" FT /inference="protein motif:CDD:Uba3_RUB, Ubiquitin FT activating enzyme (E1) subunit UBA3" FT /inference="protein motif:CDD:Ube1_repeat1, Ubiquitin FT activating enzyme (E1), repeat 1" FT /inference="protein motif:CDD:Ube1_repeat2, Ubiquitin FT activating enzyme (E1), repeat 2" FT /inference="protein motif:CDD:YgdL_like, Family of FT activating enzymes (E1) of ubiquitin-like proteins related FT to the E" FT /inference="protein motif:COG:COG0476 FT Dinucleotide-utilizing enzymes involved in molybdopterin FT and thiamine biosynthesis family 2; H Coenzyme transport FT and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPanther:PTHR10953 FT UBIQUITIN-ACTIVATING ENZYME E1" FT /inference="protein motif:HMMPanther:PTHR10953:SF43 FT MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN" FT /inference="protein motif:HMMPfam:PF00899 ThiF FT InterPro:IPR000594 UBA/THIF-type NAD/FAD binding fold FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMPfam:PF05237 MoeZ_MoeB FT InterPro:IPR007901 MoeZ/MoeB" FT /inference="protein motif:ProfileScan:PS50204 UBA_NAD FT InterPro:IPR000594 UBA/THIF-type NAD/FAD binding fold FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:ProfileScan:PS50205 NAD_BINDING FT InterPro:IPR000205 NAD-binding site" FT /inference="protein motif:superfamily:SSF69572 Activating FT enzymes of the ubiquitin-like proteins InterPro:IPR009036 FT Molybdenum cofactor biosynthesis" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32676.1" FT /translation="MLTDRELQRYNRQIMIIGTEGQERLKGSTVAVVGVGGLGSPVALY FT LTAAGVGRIVLIDSEKPELSNLNRQILHWEEDLGARPKPLSGKWKLERFNSDVEVVARP FT VRLSEENIDEVLKDADVIVDCLDSFEARFLLDDYAKRTGKPLVHGAVEGTYGQVTTILP FT GKTKTLREIFPRVKEKKGKLPIIGPTAGVVGSIQAMEVIKLLTGLGEPLFNRLLIIDLA FT HNVYELVEL" FT gene 169701..170030 FT /locus_tag="TGAM_0175" FT /note="tg0175" FT CDS 169701..170030 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0175" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A365" FT /protein_id="ACS32677.1" FT /translation="MVKGVKWDEFEGQLLSEGFVELGDFRIELTLDNTFMDVAYIPRIA FT VYSRGRDKWYVLRNPIKPGNKLDEGWENAVKVLREILTGSAEPDFNDPDLEREFLETLR FT RHVEP" FT gene 170069..170746 FT /gene="deoC" FT /locus_tag="TGAM_0176" FT /note="tg0176" FT CDS 170069..170746 FT /codon_start=1 FT /transl_table=11 FT /gene="deoC" FT /locus_tag="TGAM_0176" FT /product="Deoxyribose-phosphate aldolase FT (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) FT (deoC)" FT /EC_number="4.1.2.4" FT /db_xref="GOA:C5A366" FT /db_xref="InterPro:IPR002915" FT /db_xref="InterPro:IPR011343" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR022979" FT /db_xref="UniProtKB/Swiss-Prot:C5A366" FT /inference="protein motif:BlastProDom:PD007048 FT THIC_PYRFU_Q8U0Q4; InterPro:IPR002817 Thiamine biosynthesis FT protein ThiC GO:Biological Process:thiamin biosynthesis FT (GO:0009228)" FT /inference="protein motif:CDD:Aldolase_Class_I, Class I FT aldolases" FT /inference="protein motif:CDD:DeoC, FT 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC FT family" FT /inference="protein motif:CDD:DeoC, Deoxyribose-phosphate FT aldolase" FT /inference="protein motif:CDD:DeoC, Deoxyribose-phosphate FT aldolase [Nucleotide transport and metabolism]" FT /inference="protein motif:COG:COG0274 Deoxyribose-phosphate FT aldolase; F Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.20.170 no FT description" FT /inference="protein motif:HMMPanther:PTHR10889 FT DEOXYRIBOSE-PHOSPHATE ALDOLASE InterPro:IPR011343 FT Deoxyribose-phosphate aldolase GO:Molecular FT Function:deoxyribose-phosphate aldolase activity FT (GO:0004139), Cellular Component:cytoplasm (GO:0005737), FT Biological Process:deoxyribonucleotide catabolism FT (GO:0009264)" FT /inference="protein motif:HMMPanther:PTHR10889:SF1 FT DEOXYRIBOSE-PHOSPHATE ALDOLASE" FT /inference="protein motif:HMMPfam:PF01791 DeoC FT InterPro:IPR002915 Deoxyribose-phosphate FT aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase FT GO:Molecular Function:lyase activity (GO:0016829)" FT /inference="protein motif:HMMPIR:PIRSF001357 FT Deoxyribose-phosphate aldolase InterPro:IPR011343 FT Deoxyribose-phosphate aldolase GO:Molecular FT Function:deoxyribose-phosphate aldolase activity FT (GO:0004139), Cellular Component:cytoplasm (GO:0005737), FT Biological Process:deoxyribonucleotide catabolism FT (GO:0009264)" FT /inference="protein motif:HMMTigr:TIGR00126 FT deoC:deoxyribose-phosphate aldolase InterPro:IPR011343 FT Deoxyribose-phosphate aldolase GO:Molecular FT Function:deoxyribose-phosphate aldolase activity FT (GO:0004139), Cellular Component:cytoplasm (GO:0005737), FT Biological Process:deoxyribonucleotide catabolism FT (GO:0009264)" FT /inference="protein motif:ProfileScan:PS50264 FMN_ENZYMES FT InterPro:IPR003009 FMN/related compound-binding core" FT /inference="protein motif:superfamily:SSF51569 Aldolase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32678.1" FT /translation="MVGMDIAKYIDHTNLKPYATKEDIIKLCDEAIQYGFYAVCVNPYR FT VKLAKEYLSEKKADVKVASVIGFPLGATPTEVKVFEARKALEDGADELDMVINIGALKD FT GDYDYVKRDIEEVVKVAHEKGAKVKVIIETCYLTEEEKIKACELAKEAGADFVKTSTGF FT GTGGATVEDVRLMRKVVGPEMGVKAAGGIRTYEQALAMIEAGANRIGTSSGVRIVEGAR FT NAE" FT gene 170736..171023 FT /locus_tag="TGAM_0177" FT /note="tg0177" FT CDS 170736..171023 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0177" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR014418" FT /db_xref="UniProtKB/TrEMBL:C5A367" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32679.1" FT /translation="MPSKEEMLELIERASQELREEGVNPDILLAGPGFVEVMGELLDVL FT DLPVYVIKELEYDAVIADSRYLGQVRKASKRISIEPLLVEENVWEEIRKL" FT gene complement(171024..171680) FT /locus_tag="TGAM_0178" FT /note="tg0178" FT CDS complement(171024..171680) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0178" FT /product="Conserved hypothetical protein" FT /note="Predicted membrane protein; 6 probable transmembrane FT helices predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A368" FT /protein_id="ACS32680.1" FT /translation="MSSRPSSLSFLGKGFKEEALLQLGWNMDVNPLWLKALVFLFLTVY FT LSFLIRNRENFNVGNNLVLSAVSFSFALSLGLSFVRENGMDLSYVGLIFSSLTFGWIGG FT ISGAFGIAVAVYSTGAGTEEIALCLMLCSAASAVAGILAKKGSDFSTLLVGSVLAGITI FT LSGEYAYLLINGVTDVQAVLAPKTVSIVTGVILGTGAAFYVKKLENWPEPIERKK" FT gene complement(171677..173014) FT /locus_tag="TGAM_0179" FT /note="tg0179" FT CDS complement(171677..173014) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0179" FT /product="Pyridoxal phosphate-dependent aminotransferase, FT class III family" FT /db_xref="GOA:C5A369" FT /db_xref="InterPro:IPR005814" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:C5A369" FT /inference="protein motif:CDD:Aminotran_3, Aminotransferase FT class-III" FT /inference="protein motif:CDD:ArgD, FT Ornithine/acetylornithine aminotransferase [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:BioA, FT Adenosylmethionine-8-amino-7-oxononanoate aminotransferase FT [Coenzyme metabolism]" FT /inference="protein motif:CDD:GabT, 4-aminobutyrate FT aminotransferase and related aminotransferases [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:HemL, FT Glutamate-1-semialdehyde aminotransferase [Coenzyme FT metabolism]" FT /inference="protein motif:COG:COG0160 4-aminobutyrate FT aminotransferase and related aminotransferases; E Amino FT acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.640.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11986 FT AMINOTRANSFERASE InterPro:IPR005814 Aminotransferase FT class-III GO:Molecular Function:transaminase activity FT (GO:0008483), Molecular Function:pyridoxal phosphate FT binding (GO:0030170)" FT /inference="protein motif:HMMPanther:PTHR11986:SF51 FT 4-AMINOBUTYRATE AMINOTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00202 Aminotran_3 FT InterPro:IPR005814 Aminotransferase class-III GO:Molecular FT Function:transaminase activity (GO:0008483), Molecular FT Function:pyridoxal phosphate binding (GO:0030170)" FT /inference="protein motif:ScanRegExp:PS00600 FT AA_TRANSFER_CLASS_3 InterPro:IPR005814 Aminotransferase FT class-III GO:Molecular Function:transaminase activity FT (GO:0008483), Molecular Function:pyridoxal phosphate FT binding (GO:0030170)" FT /inference="protein motif:superfamily:SSF53383 FT PLP-dependent transferases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32681.1" FT /translation="MVVRPNVKELPGPKAREVIERNFKYLAMTTQDPENLPIVIERGEG FT IRVYDVDGNVFYDFASGVGVINVGHAHPRVVEAIKKQAEKFTHYSLTDFFYENAVVLAE FT KLIELAPGDFEKKVVYSNSGAEANEAAMKLVKYGTGRKQFLAFYHAFHGRTQAVLSLTA FT SKWVQQDGFFPTMPGVTHIPYPNPYRNTWGIDGYDEPDELINRVLDFIEEYVFRHVPPH FT EVGAIFFEPIQGEGGYVVPPKNFFKELKKFADEYGILLADDEVQMGIGRTGKFWAIEHF FT GVEPDLIQFGKAIGGGLPLAGVVHRKEISFDKPGRHATTFGGNPVAIAAGIEVVEIVKE FT LLPHVQEVGDYLHKILEELKENYEVIGDARGLGLAQAVEIVKSKDTKEKYPELRDRIVG FT EAAKRGLVLLGCGDNSIRFIPPLIVTKEEIDIAMEIFEDALKAALK" FT gene complement(173149..174150) FT /gene="trxB" FT /locus_tag="TGAM_0180" FT /note="tg0180" FT CDS complement(173149..174150) FT /codon_start=1 FT /transl_table=11 FT /gene="trxB" FT /locus_tag="TGAM_0180" FT /product="Thioredoxin reductase (trxB)" FT /EC_number="1.8.1.9" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A370" FT /db_xref="InterPro:IPR000103" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR005982" FT /db_xref="InterPro:IPR008255" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:C5A370" FT /inference="protein motif:CDD:AhpF, Alkyl hydroperoxide FT reductase, large subunit [Posttranslational modification, FT protein turnover, chaperones]" FT /inference="protein motif:CDD:GltD, NADPH-dependent FT glutamate synthase beta chain and related oxidoreductases FT [Amino acid transport and metabolism / General function FT prediction only]" FT /inference="protein motif:CDD:HcaD, Uncharacterized FT NAD(FAD)-dependent dehydrogenases [General function FT prediction only]" FT /inference="protein motif:CDD:Lpd, Pyruvate/2-oxoglutarate FT dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) FT component, and related enzymes [Energy production and FT conversion]" FT /inference="protein motif:CDD:NirB, NAD(P)H-nitrite FT reductase [Energy production and conversion]" FT /inference="protein motif:CDD:Pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:CDD:TrkA, Predicted flavoprotein FT involved in K+ transport [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:TrxB, Thioredoxin reductase FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:COG:COG0492 Thioredoxin FT reductase; O Posttranslational modification, protein FT turnover, chaperones" FT /inference="protein motif:FPrintScan:PR00368 FADPNR FT InterPro:IPR013027 FAD-dependent pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:FPrintScan:PR00419 ADXRDTASE FT InterPro:IPR000759 Adrenodoxin reductase GO:Biological FT Process:electron transport (GO:0006118)" FT /inference="protein motif:FPrintScan:PR00469 PNDRDTASEII FT InterPro:IPR000103 Pyridine nucleotide-disulphide FT oxidoreductase, class-II GO:Biological Process:electron FT transport (GO:0006118), Molecular Function:oxidoreductase FT activity (GO:0016491)" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPanther:PTHR11493 FT DIHYDROLIPOAMIDE DEHYDROGENASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11493:SF36 FT THIOREDOXIN REDUCTASE-RELATED" FT /inference="protein motif:HMMPfam:PF07992 Pyr_redox_2 FT InterPro:IPR013027 FAD-dependent pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:HMMTigr:TIGR01292 FT TRX_reduct:thioredoxin-disulfide reductas FT InterPro:IPR005982 Thioredoxin reductase GO:Molecular FT Function:thioredoxin-disulfide reductase activity FT (GO:0004791), Cellular Component:cytoplasm (GO:0005737), FT Biological Process:removal of superoxide radicals FT (GO:0019430)" FT /inference="protein motif:ProfileScan:PS50205 NAD_BINDING FT InterPro:IPR000205 NAD-binding site" FT /inference="protein motif:ScanRegExp:PS00573 FT PYRIDINE_REDOX_2 InterPro:IPR008255 Pyridine FT nucleotide-disulphide oxidoreductase, class-II, active site FT GO:Biological Process:electron transport (GO:0006118), FT Molecular Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:superfamily:SSF51905 FT FAD/NAD(P)-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32682.1" FT /translation="MGEMFSLGGFSRGGEYEKKLWDVLIIGAGPAGFTAAIYAARFGLE FT TLILSKDLGGNMALTDLIENYPGFPEGISGSELTARMHEHVKRLGVDIVFDEVERIDPA FT ECAYYEGPCKFTVKTKNGKEYRAKTIIIAVGAAPRKLKVPGEEELTGKGVSYCATCDGP FT LFKGKKVIVVGGGNTALQEALYLKSIGVDVTLVHRRQKFRADKILQDRFRESGIPAILD FT TVVTEIIGKDKVEAVRLKNVKTGEEKEMKVDGVFIFIGYEPKTDFVKHLGITDDYGYIP FT VDMHMRTKVPGIFAAGDITNVFKQIAVAVGQGAIAANSAKEFLEKWAEKNGE" FT gene complement(174209..174742) FT /locus_tag="TGAM_0181" FT /note="tg0181" FT CDS complement(174209..174742) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0181" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF457 family, predicted membrane-bound FT metal-dependent hydrolase; 3 probable transmembrane helices FT predicted by modhmm" FT /db_xref="InterPro:IPR007404" FT /db_xref="UniProtKB/TrEMBL:C5A371" FT /inference="protein motif:COG:COG1988 Predicted FT membrane-bound metal-dependent hydrolases; R General FT function prediction only" FT /protein_id="ACS32683.1" FT /translation="MPNYDVHVLSGIATYPVAVLIGELLKVYAKLPIELTPTALILGYA FT LYVLGSDLPDMDHPDALIHRGSKPIISVAVGSAVFLWAGDKVNLSPEWLNPVVAWVLGA FT LGGIIAWYLFTALMPRHRGIVHSLLFAAVYGFLAFALAGYGLKLSLGEGVYVGLAAFLG FT YTLHLTLDGSIKLV" FT gene complement(174746..175936) FT /locus_tag="TGAM_0182" FT /note="tg0182" FT CDS complement(174746..175936) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0182" FT /product="AAA family ATPase, possibly ruvB related" FT /db_xref="InterPro:IPR011579" FT /db_xref="UniProtKB/TrEMBL:C5A372" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32684.1" FT /translation="MESEELKVYPVQSYEIYGLSRNPFEQLASEGIEDVEAIHVYQEVD FT MKLSMIISEVIGNKSSIAMSIVGPLGMGKTQRLKSIAKAIEREGGKAIYVKVDTNDILK FT LTRDIFYALKPPRSRTNIFLENLSRKLGFIDRLEKMLSDTKEYKSRDIAELLVQQLRKY FT PYSALLLDELENMQGAREQEKIQFFEMLRHVISTMPPGCIVAFACIPEAYEEYSKIFPA FT FFMRLHYEFKLRPMSVEETFELVKKRLNRVRIRDTDDPIYPFTDEAIKLIHDLAKGNPR FT QILRLLHYVLSEAAKRAFDPIDELVVSTILEEPKSLEEYLRRVPKDYRDLVKVIVEKFN FT GGPVSYISVAKELKRPANQVYEALNKLVAIGFLVGDPGGNYKVPHYVRKFLEEKEE" FT gene 175998..176483 FT /locus_tag="TGAM_0183" FT /note="tg0183" FT CDS 175998..176483 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0183" FT /product="RNA-binding protein, putative" FT /note="Contains 1 THUMP domain" FT /db_xref="InterPro:IPR004114" FT /db_xref="UniProtKB/TrEMBL:C5A373" FT /inference="protein motif:CDD:THUMP, THUMP domain" FT /inference="protein motif:COG:COG1818 Predicted RNA-binding FT protein, contains THUMP domain; R General function FT prediction only" FT /inference="protein motif:HMMPfam:PF02926 THUMP FT InterPro:IPR004114 THUMP" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32685.1" FT /translation="MVVLIVTCPPGREGDAILELEWALGRVRVRGTDWRGLLVAESPLS FT KDEAIERLKRFETQAIQRVVPLDLLVPASLDVIEQRAIELMGGKTGTFAVRARVRGNKK FT LREMELERKIGEAIVRAYGLRVNLTDPDWTLAIEVLGKKAGVGVLGRGEILRFKVVE" FT gene 176495..176845 FT /locus_tag="TGAM_0184" FT /note="tg0184" FT CDS 176495..176845 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0184" FT /product="Conserved hypothetical protein" FT /note="Contains 1 ProFAR isomerase associated domain" FT /db_xref="InterPro:IPR007374" FT /db_xref="InterPro:IPR010759" FT /db_xref="InterPro:IPR015947" FT /db_xref="InterPro:IPR016645" FT /db_xref="UniProtKB/TrEMBL:C5A374" FT /inference="protein motif:CDD:COG4043, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:ProFAR-like, ProFAR FT isomerase-like" FT /inference="protein motif:COG:COG4043 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF07060 DUF1530 FT InterPro:IPR010759 ProFAR isomerase-like" FT /protein_id="ACS32686.1" FT /translation="MRRWKMGLQEEYLKAIAEGKKKIEGRLYDEKRQAIKPGDEIVFEN FT KLVCVVKDLRVYSSFREMLEKEGLENVLPGVKSIEEGVKVYRKFYSEEKEKKYGVVAIE FT VEPVAWIGEPLE" FT gene complement(176861..177100) FT /locus_tag="TGAM_0185" FT /note="tg0185" FT CDS complement(176861..177100) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0185" FT /product="Hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A375" FT /protein_id="ACS32687.1" FT /translation="MMTGLPRFLGVYPDSVANHLSCNLKTLFAVYLCSLCGGAVMEETE FT GNAWVLEKITGILGEEECWMTIENLRAIKKEFEK" FT gene complement(177235..178734) FT /locus_tag="TGAM_0186" FT /note="tg0186" FT CDS complement(177235..178734) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0186" FT /product="Thermostable carboxypeptidase 1" FT /EC_number="3.4.17.19" FT /note="Belongs to M32 family" FT /db_xref="GOA:C5A376" FT /db_xref="InterPro:IPR001333" FT /db_xref="UniProtKB/TrEMBL:C5A376" FT /inference="protein motif:COG:COG2317 Zn-dependent FT carboxypeptidase; E Amino acid transport and metabolism" FT /inference="protein motif:FPrintScan:PR00998 CRBOXYPTASET FT InterPro:IPR001333 Peptidase M32, carboxypeptidase Taq FT metallopeptidase GO:Molecular FT Function:metallocarboxypeptidase activity (GO:0004181), FT Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:Gene3D:G3D.1.10.1370.10 no FT description" FT /inference="protein motif:HMMPfam:PF02074 Peptidase_M32 FT InterPro:IPR001333 Peptidase M32, carboxypeptidase Taq FT metallopeptidase GO:Molecular FT Function:metallocarboxypeptidase activity (GO:0004181), FT Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:HMMPIR:PIRSF006615 Zn-dependent FT carboxypeptidase, Taq type InterPro:IPR001333 Peptidase FT M32, carboxypeptidase Taq metallopeptidase GO:Molecular FT Function:metallocarboxypeptidase activity (GO:0004181), FT Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:ScanRegExp:PS00142 ZINC_PROTEASE FT InterPro:IPR006025 Peptidase M, neutral zinc FT metallopeptidases, zinc-binding site GO:Biological FT Process:proteolysis (GO:0006508), Molecular FT Function:metallopeptidase activity (GO:0008237), Molecular FT Function:zinc ion binding (GO:0008270)" FT /inference="protein motif:superfamily:SSF55486 FT Metalloproteases ('zincins'), catalytic domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32688.1" FT /translation="MNSVFQNETIREILTKYRRIWAIGHAQSVLGWDMEVNMPKEGILE FT RSVAQGELSVLSQEFLLKPDFVELVEKAKSIEDLNEYERGVVRVLDRSIRISRSFPPEF FT LREMSEVTSQATKAWEEAKRTDDYSKFEPWLDKIIDLAKRAAEYLGYEEEPYDALLDMF FT EEGLRTKEVERMFDKLEKELKPLLERIMEEGKVPQSHPLEKEKYEREQMEKVNLWILEK FT FGFPLGVRSRLDVSAHPFTTEFGIRDVRITTRYEGYDFRRTILSTVHEFGHALYELQQD FT ERFMFSPIAGGVSLGIHESQSRFWENIIGRSREFAGLIYPVLKENLPFMTNYTPEDVYL FT YFNMVRPDFIRTEADVVTYNFHILLRFKLERMMLNEGVKAKDLPELWNEEMERLLGIRP FT KSYAEGILQDIHWAHGTIGYFPTYSIGTLLASQLYYHMKKDIPDFEDKVAKAKFEPIKA FT WLREKIHRWGSIYPPKELLKKAIGEELNPDYFIRWVKERYL" FT gene 178868..179695 FT /locus_tag="TGAM_0187" FT /note="tg0187" FT CDS 178868..179695 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0187" FT /product="Carbohydrate kinase, pfkB/Ribokinase family" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A377" FT /db_xref="InterPro:IPR002139" FT /db_xref="InterPro:IPR002173" FT /db_xref="InterPro:IPR011611" FT /db_xref="UniProtKB/TrEMBL:C5A377" FT /inference="protein motif:CDD:adenosine_kinase, Adenosine FT kinase (AK) catalyzes the phosphorylation of FT ribofuranosyl-containing nucleoside analogues at the FT 5'-hydroxyl using ATP or GTP as the phosphate donor" FT /inference="protein motif:CDD:bac_FRK, Fructokinases (FRKs) FT mainly from bacteria and plants are enzymes with high FT specificity for fructose, as are all FRKs, but they FT catalyzes the conversion of fructose to FT fructose-6-phosphate, which is an entry point into FT glycolysis via conversion into glucose-6-phosphate" FT /inference="protein motif:CDD:Fructoselysine_kinase_like, FT Fructoselysine kinase-like" FT /inference="protein motif:CDD:FruK, Fructose-1-phosphate FT kinase and related fructose-6-phosphate kinase (PfkB) FT [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:FruK_PfkB_like, FT 1-phosphofructokinase (FruK), minor 6-phosphofructokinase FT (pfkB) and related sugar kinases" FT /inference="protein motif:CDD:Guanosine_kinase_like, FT Guanosine kinase-like sugar kinases" FT /inference="protein motif:CDD:KdgK, 2-keto-3-deoxygluconate FT kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) FT to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)" FT /inference="protein motif:CDD:MAK32, MAK32 kinase" FT /inference="protein motif:CDD:PdxK, FT Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme FT metabolism]" FT /inference="protein motif:CDD:PfkB, pfkB family FT carbohydrate kinase" FT /inference="protein FT motif:CDD:pyridoxal_pyridoxamine_kinase, Pyridoxal kinase FT plays a key role in the synthesis of the active coenzyme FT pyridoxal-5'-phosphate (PLP), by catalyzing the FT phosphorylation of the precursor vitamin B6 in the presence FT of Zn2+ and ATP" FT /inference="protein motif:CDD:RbsK, Sugar kinases, FT ribokinase family [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:RfaE, ADP-heptose synthase, FT bifunctional sugar kinase/adenylyltransferase [Cell FT envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:RfaE_like, RfaE encodes a FT bifunctional ADP-heptose synthase involved in the FT biosynthesis of the lipopolysaccharide (LPS) core precursor FT ADP-L-glycero-D-manno-heptose" FT /inference="protein motif:CDD:ribokinase, Ribokinase FT catalyses the phosphorylation of ribose to FT ribose-5-phosphate using ATP" FT /inference="protein motif:CDD:ribokinase_group_A, FT Ribokinase-like subgroup A" FT /inference="protein motif:CDD:ribokinase_group_B, FT Ribokinase-like subgroup B" FT /inference="protein motif:CDD:ribokinase_group_C, FT Ribokinase-like subgroup C" FT /inference="protein motif:CDD:ribokinase_group_D, FT Ribokinase-like subgroup D" FT /inference="protein motif:CDD:ribokinase_pfkB_like, FT ribokinase/pfkB superfamily:Kinases that accept a wide FT variety of substrates, including carbohydrates and aromatic FT small molecules, all are phosphorylated at a hydroxyl FT group" FT /inference="protein motif:CDD:YeiC_kinase_like, YeiC-like FT sugar kinase" FT /inference="protein motif:COG:COG0524 Sugar kinases, FT ribokinase family; G Carbohydrate transport and metabolism" FT /inference="protein motif:FPrintScan:PR00990 RIBOKINASE FT InterPro:IPR002139 Ribokinase GO:Molecular FT Function:ribokinase activity (GO:0004747), Biological FT Process:D-ribose metabolism (GO:0006014)" FT /inference="protein motif:Gene3D:G3D.3.40.1190.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR10584 PFKB FAMILY FT OF CARBOHYDRATE KINASES" FT /inference="protein motif:HMMPanther:PTHR10584:SF24 FT RIBOKINASE" FT /inference="protein motif:HMMPfam:PF00294 PfkB FT InterPro:IPR011611 PfkB" FT /inference="protein motif:ScanRegExp:PS00217 FT SUGAR_TRANSPORT_2 InterPro:IPR005829 Sugar transporter FT superfamily GO:Molecular Function:transporter activity FT (GO:0005215), Biological Process:transport (GO:0006810), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:ScanRegExp:PS00584 PFKB_KINASES_2 FT InterPro:IPR002173 Carbohydrate kinase, PfkB" FT /inference="protein motif:superfamily:SSF53613 FT Ribokinase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32689.1" FT /translation="MEVELVVLGHVSIDTIVFPDGGRIEMPGGAAAAVATSAALAGAKV FT GLVTKVGEDFPREWLQKLAKYVDIRGVQVLPGKTIHIWVIYKPDGSVESPVEVGVAERM FT GETPIPEEYLKAKLFHIAPIPPEEQLKVIERLGKMRISVDFNPTYYEDYRRKPELVREL FT VSRSYIVFPNEREAKLITGLDDVRKAAEELHSWGAELVVVTRGEKGVLIYDGDFHEFPA FT LPVEGEIDPTGAGDAFAGGFLAGLVKGKALEECARLGLERAREVLKKSGSWSV" FT gene complement(179692..180120) FT /locus_tag="TGAM_0188" FT /note="tg0188" FT CDS complement(179692..180120) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0188" FT /product="Conserved hypothetical protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A378" FT /protein_id="ACS32690.1" FT /translation="MRKPKRRFHSLIPLVLSIYLLYTVDRWSLLLLPLALLGVQWHFFG FT MLFLTGAGVLLVYRNVGGVLGITIVALALLTIEMGQMDKEKAPYEHYAVLILAASMSIP FT TYLLIRTISPFLPRVEVTAVAAGVVLALYLFTRTAGED" FT gene complement(180117..181361) FT /locus_tag="TGAM_0189" FT /note="tg0189" FT CDS complement(180117..181361) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0189" FT /product="MoxR associated protein, containing DUF58 and Von FT Willebrand factor, type A domains" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR002035" FT /db_xref="InterPro:IPR002881" FT /db_xref="UniProtKB/TrEMBL:C5A379" FT /inference="protein motif:CDD:COG1721, Uncharacterized FT conserved protein (some members contain a von Willebrand FT factor type A (vWA) domain) [General function prediction FT only]" FT /inference="protein motif:CDD:DUF58, Protein of unknown FT function DUF58" FT /inference="protein motif:COG:COG1721 Uncharacterized FT conserved protein (some members contain a von Willebrand FT factor type A (vWA) domain); R General function prediction FT only" FT /inference="protein motif:Gene3D:G3D.3.40.50.1000 no FT description" FT /inference="protein motif:HMMPfam:PF01882 DUF58 FT InterPro:IPR002881 Protein of unknown function DUF58" FT /inference="protein motif:superfamily:SSF53300 vWA-like" FT /inference="protein motif:superfamily:SSF56784 HAD-like" FT /protein_id="ACS32691.1" FT /translation="MPGEIKPELTERAAETLLAMWLILISAFFFLRWELAYLILPILWV FT FFVSIFFFRPEIKLEVRREIPHDRMLEGEVAEIRLRVKSNARIPSLKIEEDIPDGLELV FT EGSREHVLSLGKDEERVIKYRVRVRRGIHEFNGVRVSYRDPMGFFKLDHFIEHYTELIG FT MPLIEDVPTPYSTRGTKITAGPLPSPRIGEGVEFHAIREYQPGDPLKIINWKATAKTGK FT IMANEYESERKVDVIFIVDASYRGRRVFDHLVRAAASLMLNALNNGTSFGLLLAEAVPL FT WVRVDYGKRHFFKCIDFLSTAKPDRNNMIAYQVEHLIRSRFPARAQLLYFSTLLTEESR FT EALRTMSAYGYRVVVISPDPYSLVEPKTKEEELAVRILRLKRKAQLRRMATYGIIIDWD FT VKKPLKAAIAEVIHP" FT gene complement(181367..182314) FT /gene="moxR-2" FT /locus_tag="TGAM_0190" FT /note="tg0190" FT CDS complement(181367..182314) FT /codon_start=1 FT /transl_table=11 FT /gene="moxR-2" FT /locus_tag="TGAM_0190" FT /product="moxR-type AAA ATPase, putative chaperone protein FT (moxR)" FT /db_xref="GOA:C5A380" FT /db_xref="InterPro:IPR011703" FT /db_xref="InterPro:IPR016366" FT /db_xref="UniProtKB/TrEMBL:C5A380" FT /inference="protein motif:CDD:ChlI, Mg-chelatase subunit FT ChlI [Coenzyme metabolism]" FT /inference="protein motif:CDD:COG0714, MoxR-like ATPases FT [General function prediction only]" FT /inference="protein motif:CDD:Mg_chelatase, Magnesium FT chelatase, subunit ChlI" FT /inference="protein motif:COG:COG0714 MoxR-like ATPases; R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.1.10.8.80 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPfam:PF07726 AAA_3 FT InterPro:IPR011703 ATPase associated with various cellular FT activities, AAA-3 GO:Molecular Function:ATP binding FT (GO:0005524), Molecular Function:ATPase activity FT (GO:0016887)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32692.1" FT /translation="MEEVELKGKEVLGEVKKAIVGKDEVLRLILTTILADGHILLEDLP FT GLAKTLMAKSFARALGVEFRRVQFTPDLLPSDILGVSIFNQKTLEFEFKRGPVFTNVLL FT ADEINRAPPKTQSALLEAMQERQVTIEGNTYELPKPFIVIATQNPIEQEGTYPLPEAQL FT DRFLVRLRVGYPSKEEEIEILRRRMERKKEEVDIHPVTTPEEVVEMQRAIEDVYVSDAI FT LEYITDIVTATRENKKEIEVGASPRGSLALLKLSRAYAALNGRDYVIPDDVKAVAVPAL FT SHRLILKRELWYTRVSQESITKKLLDRVPVPKFE" FT gene complement(182301..182741) FT /locus_tag="TGAM_0191" FT /note="tg0191" FT CDS complement(182301..182741) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0191" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A381" FT /protein_id="ACS32693.1" FT /translation="MRIRRSFLILIALPLIGGIVFGAYVLRWLSVLLLSVITLAYLFGE FT ELRIAYPSMHRKEVGERKDEVERVTKIIEKAKESPVSRSILEEQIIEIYMTLSDNQAET FT YRKLHEEPNEAILLIRKEGNFLENLEKALNVVEVDIDEGGRG" FT gene complement(182728..183597) FT /locus_tag="TGAM_0192" FT /note="tg0192" FT CDS complement(182728..183597) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0192" FT /product="Conserved hypothetical protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A382" FT /inference="protein motif:COG:COG1989 Type II secretory FT pathway, prepilin signal peptidase PulO and related FT peptidases; N Cell motility" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32694.1" FT /translation="MELRQMSIRTKALTVMLGILLLMALLFHSTVRQGEIERSSSSPAI FT WSIIISVAAIASMMIVLLLFLSWRDVPGKRKDLYKDGRAFTRAIAFFVTALFFGAVLQI FT LAGGGHPLPLNATANNTTNTPGVIGTPQSYNVSPHQAKEGGTFSFPVWIGYTIGVAFVI FT FLVIWGTNYYREIIRRRKRKAIKLKAEAFDRKLHEEGLEAFDNPRDAIVGIYKNAVLWL FT EYLGVPYRESWTHWEHAQRVGFRKEIFIELTRLFEKAKYAPEKVTWEDAERALKAYREM FT RREMDENT" FT gene 183678..184172 FT /locus_tag="TGAM_0193" FT /note="tg0193" FT CDS 183678..184172 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0193" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR016749" FT /db_xref="InterPro:IPR019217" FT /db_xref="UniProtKB/TrEMBL:C5A383" FT /inference="protein motif:CDD:COG4072, Uncharacterized FT protein conserved in archaea [Function unknown]" FT /inference="protein motif:COG:COG4072 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:superfamily:SSF54680 Pyrimidine FT nucleoside phosphorylase C-terminal domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32695.1" FT /translation="MERLPRLYVETSFEECFAGEKAVEDCVVIMDNVEVWLGKGEALPG FT FIDVERSKFLRREVYDRFYLYVDRVESRMLADAILVLPDGRTRIYLRKGDELLLLPVEG FT FTKTLIANVGNRVRTGDAFAAVTTRKGEVHYLKPPKSGTVVFIDEITNRPHYVYYILPE FT E" FT gene 184254..184724 FT /gene="slyD-1" FT /locus_tag="TGAM_0194" FT /note="tg0194" FT CDS 184254..184724 FT /codon_start=1 FT /transl_table=11 FT /gene="slyD-1" FT /locus_tag="TGAM_0194" FT /product="FKBP-type peptidyl-prolyl cis-trans isomerase FT (slyD)" FT /EC_number="5.2.1.8" FT /db_xref="GOA:C5A384" FT /db_xref="InterPro:IPR001179" FT /db_xref="InterPro:IPR023566" FT /db_xref="UniProtKB/TrEMBL:C5A384" FT /inference="protein motif:CDD:FKBP_C, FKBP-type FT peptidyl-prolyl cis-trans isomerase" FT /inference="protein motif:CDD:SlpA, FKBP-type FT peptidyl-prolyl cis-trans isomerases 2 [Posttranslational FT modification, protein turnover, chaperones]" FT /inference="protein motif:COG:COG1047 FKBP-type FT peptidyl-prolyl cis-trans isomerases 2; O Posttranslational FT modification, protein turnover, chaperones" FT /inference="protein motif:Gene3D:G3D.3.10.50.40 no FT description" FT /inference="protein motif:HMMPanther:PTHR10516 FT FK506-BINDING PROTEIN" FT /inference="protein motif:HMMPanther:PTHR10516:SF39 FT FK506-BINDING PROTEIN" FT /inference="protein motif:HMMPfam:PF00254 FKBP_C FT InterPro:IPR001179 Peptidylprolyl isomerase, FKBP-type FT GO:Biological Process:protein folding (GO:0006457)" FT /inference="protein motif:ProfileScan:PS50059 FKBP_PPIASE FT InterPro:IPR001179 Peptidylprolyl isomerase, FKBP-type FT GO:Biological Process:protein folding (GO:0006457)" FT /inference="protein motif:superfamily:SSF54534 FKBP-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32696.1" FT /translation="MKVERGDFVLFNYVGRYENGEVFDTSYESVAREQGIFVEEREYSP FT IGVTVGAGEIIPGIEEALLGMELGEKKEVVVPPEKGYGMPREDLIVPVPIEQFTSAGLE FT PVEGMYVMTDAGIAKILKVEEKTVRLDFNHPLAGKTAIFEIEVVEIKKAGEA" FT gene complement(184734..185645) FT /locus_tag="TGAM_0195" FT /note="tg0195" FT CDS complement(184734..185645) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0195" FT /product="Bacterial type II secretion system protein F" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR018076" FT /db_xref="UniProtKB/TrEMBL:C5A385" FT /inference="protein motif:COG:COG2064 Flp pilus assembly FT protein TadC; N Cell motility" FT /inference="protein motif:HMMPfam:PF00482 GSPII_F FT InterPro:IPR001992 Bacterial type II secretion system FT protein GO:Biological Process:protein secretion FT (GO:0009306), Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:superfamily:SSF90123 Multidrug FT resistance ABC transporter MsbA, N-terminal domain" FT /protein_id="ACS32697.1" FT /translation="MPRESGGIAVLLTRILERILPAKWIKRYELFIYSAGIEFLAIEYL FT IISILLSIIFAAVVLILSNTFYALVTLVAVFVGMAFAYPYWRVSKRIEEMEKHLPDAFF FT YLASSLRAGISFSEALEDLTTAKFGALTDEFKRVVGEIRKGRSTVEALKVMAVRNRKSP FT VVYRSLMIIIEALERGAPMSDVLVYVANDVREILRIKQERKASTGMQMMFFIITSGFVG FT PAIIGTVGKLMGIMVQGPAKAQIPTVLNILLGFVVIQAIVSGLGIGVIREGKFSAGIKY FT GIMLAIMGALVFQGMKYVNLSF" FT gene complement(185651..186727) FT /locus_tag="TGAM_0196" FT /note="tg0196" FT CDS complement(185651..186727) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0196" FT /product="Bacterial type II secretion system protein F" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR018076" FT /db_xref="UniProtKB/TrEMBL:C5A386" FT /inference="protein motif:CDD:GSPII_F, Bacterial type II FT secretion system protein F domain" FT /inference="protein motif:CDD:TadC, Flp pilus assembly FT protein TadC [Cell motility and secretion / Intracellular FT trafficking and secretion]" FT /inference="protein motif:COG:COG2064 Flp pilus assembly FT protein TadC; N Cell motility" FT /inference="protein motif:HMMPfam:PF00482 GSPII_F FT InterPro:IPR001992 Bacterial type II secretion system FT protein GO:Biological Process:protein secretion FT (GO:0009306), Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32698.1" FT /translation="MGVIESFLNFLERLGGTTLEVTEKPVRRLPRRKSIQERLRALKEI FT QKETEESKESERERELEEILEWRRKEITTSFGERLAEAFLRRFKGPVESLTKSIKGLDY FT DLYRANIRMSKEKYVALMIITSIFLGAFSLAFGLLLEMDVFTSMMLGLLGFIGGFLYMR FT HYPRMVWRRRVAEVEKALPYVLRHIASLLSAGVGIAEALVSVAKADYGVASEEFELIVR FT DMRAGASFEEALERFEEKMGSENVSRVVKQILRAIKFGGNLAEILYKMAEDFAFEYRMK FT LVEYVQKVNGIAFIYMFMTIVMPTMFIVAILAGSAFSAQGGGGTLALSPSALAVILLFA FT FPMLSLIIVTMIKRGEPR" FT gene complement(186737..190339) FT /locus_tag="TGAM_0197" FT /note="tg0197" FT CDS complement(186737..190339) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0197" FT /product="AAA family ATPase, type II secretion system FT protein, containing DOD-type homing endonuclease" FT /note="intein span: 515 - 1037" FT /db_xref="GOA:C5A387" FT /db_xref="InterPro:IPR001482" FT /db_xref="InterPro:IPR003586" FT /db_xref="InterPro:IPR003587" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004042" FT /db_xref="InterPro:IPR006141" FT /db_xref="InterPro:IPR006142" FT /db_xref="UniProtKB/TrEMBL:C5A387" FT /inference="protein motif:BlastProDom:PD000739 FT Q8U256_PYRFU_Q8U256; InterPro:IPR001482 Bacterial type II FT secretion system protein E GO:Molecular Function:ATP FT binding (GO:0005524), Cellular Component:intracellular FT (GO:0005622), Biological Process:transport (GO:0006810)" FT /inference="protein motif:CDD:COG1372, Intein/homing FT endonuclease [DNA replication, recombination, and repair]" FT /inference="protein motif:CDD:CpaF, Flp pilus assembly FT protein, ATPase CpaF [Intracellular trafficking and FT secretion]" FT /inference="protein motif:CDD:GSPII_E, Type II/IV secretion FT system protein" FT /inference="protein motif:CDD:Hint, Hedgehog/Intein domain, FT found in Hedgehog proteins as well as proteins which FT contain inteins and undergo protein splicing (e" FT /inference="protein motif:CDD:HintC, Hint (Hedgehog/Intein) FT domain C-terminal region; Hedgehog/Intein domain, FT C-terminal region" FT /inference="protein motif:CDD:PulE, Type II secretory FT pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase FT PilB [Cell motility and secretion / Intracellular FT trafficking and secretion]" FT /inference="protein motif:CDD:PulE-GspE, PulE/GspE The type FT II secretory pathway is the main terminal branch of the FT general secretory pathway (GSP)" FT /inference="protein motif:CDD:VirB11, Type IV secretory FT pathway, VirB11 components, and related ATPases involved in FT archaeal flagella biosynthesis [Cell motility and secretion FT / Intracellular trafficking and secretion]" FT /inference="protein motif:CDD:VirB11-like_ATPase, Type IV FT secretory pathway component VirB11, and related ATPases" FT /inference="protein motif:COG:COG4962 Flp pilus assembly FT protein, ATPase CpaF; U Intracellular trafficking, FT secretion, and vesicular transport" FT /inference="protein motif:FPrintScan:PR00379 INTEIN FT InterPro:IPR006142 Intein GO:Biological FT Process:intein-mediated protein splicing (GO:0016539)" FT /inference="protein motif:Gene3D:G3D.2.170.16.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPfam:PF00437 GSPII_E FT InterPro:IPR001482 Bacterial type II secretion system FT protein E GO:Molecular Function:ATP binding (GO:0005524), FT Cellular Component:intracellular (GO:0005622), Biological FT Process:transport (GO:0006810)" FT /inference="protein motif:HMMSmart:SM00305 no description FT InterPro:IPR003586 Hedgehog/intein hint domain, C-terminal" FT /inference="protein motif:HMMSmart:SM00306 no description FT InterPro:IPR003587 Hedgehog/intein hint, N-terminal" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:HMMTigr:TIGR01443 FT intein_Cterm:intein C-terminal splicing InterPro:IPR006141 FT Protein splicing (intein) site GO:Biological FT Process:intein-mediated protein splicing (GO:0016539)" FT /inference="protein motif:ProfileScan:PS50101 ATP_GTP_A2" FT /inference="protein motif:ProfileScan:PS50817 INTEIN_N_TER FT InterPro:IPR006141 Protein splicing (intein) site FT GO:Biological Process:intein-mediated protein splicing FT (GO:0016539)" FT /inference="protein motif:ProfileScan:PS50818 INTEIN_C_TER FT InterPro:IPR006141 Protein splicing (intein) site FT GO:Biological Process:intein-mediated protein splicing FT (GO:0016539)" FT /inference="protein motif:ProfileScan:PS50819 FT INTEIN_ENDONUCLEASE InterPro:IPR004042 Intein DOD homing FT endonuclease GO:Molecular Function:endonuclease activity FT (GO:0004519)" FT /inference="protein motif:ScanRegExp:PS00227 TUBULIN FT InterPro:IPR000217 Tubulin GO:Molecular Function:structural FT molecule activity (GO:0005198), Cellular FT Component:microtubule (GO:0005874), Biological FT Process:microtubule-based movement (GO:0007018)" FT /inference="protein motif:superfamily:SSF52540" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /protein_id="ACS32699.1" FT /translation="MVEKKKKKELSGSWIDEILGGKSDPLANVLSESEEEKKPPLPFIS FT ESSPLEEILGTSKKEEQKGQKTPTTPSNPLEEILRSSEKPKEESPAPSLSDILGGGKRE FT VKEEKPAKKEAKSGAPTGVDLLGQILSGGTGTAPSKPKAPAKSQPLPLPLPKPKPPLGL FT QSIIGETKTEELSYAGRAKVLDAYGNVRILRVKGEPVPIYEIRLPKLSKDEENLLKQVR FT ERAITEIQIDPTLIPNYEERRKIFLREVKRMLKEAAPHFSEGRIEVLAELIVQNMLGYG FT LLDPLVRDDNLEEIMVIGTNKPVYVWHRRFYMCKTNIVFKEERDILNIIERIAREVGRR FT IDQQNPLLDARLPDGSRVNATIPPISLDGPTITIRKFKKDPLTIIDLIKYGTMNSDVAA FT FLWLLVDGLGIKPANILVAGGTGSGKTTTLNALAMFIPPSERVISIEDTAELQLPVEHW FT VRLETRPPNIEGKGEVTMDDLVKNTLRMRPDRIIVGEVRGPEARTMFTAMNTGHNGALY FT DFSVIQLSDGRFVLIGDLLEELFEKYSDRIETYRDLEYVVLDEKDRFEVVSVGPDLKAG FT KHTVTRVWRRKVREGEKLIRVRTRTGNEVILTKTHPFFVFSDGDVVRKEAEKLKPGDRV FT AVMRKPPKPPQRKAVINPEVYAGISDYYLVPNGKGLVKVPNDGIPPEMAQYLLSINSKP FT VKLVREVNEGLSYAVGVLLGDGYISSDGYYISATFDDESYMKAFTSAISEFLPESEPQV FT KREPAYTVVTYGSRPFAEFLHRAFGIPKGRKESLDVPDLVLSNDDLLRHFIAGLFDADA FT YIDENGPAVVLTTRSENLARKVWYALQRLGIISTVSRVKNRGYKEGVIFRVTVRGVEDL FT IRFHRSIPLRHSRKREKLEELIRKYRSHRGKRTDRVPISPAMLEPLRRRLNLTVSELSK FT LASSYAREKVSESLIRHVEKGRMKEIRRSALRGIALALQQVASDLGDEETWVQAKRLEL FT IADGDVYWDEVVSVEEVEPEELGIEYLYDLTVEEDHNYVANGILVSNCMGTIHSNSARE FT TIVRLESPPMNVPRIMIPALDIIIMQVRFNSRKKGTVRRITEIAEISGIEGESIQLNKL FT YKYDPAKDELQPTEVPSRIINELARHTGMSISELEIEREKRKIILEWMMEKGIRSIEDV FT GHYIKMFYIDEEALLEKIERDSSAQIQEQIRNIS" FT mat_peptide complement(join(186740..187228,188798..190339)) FT /locus_tag="TGAM_0197" FT /product="AAA family ATPase, type II secretion system FT protein" FT mat_peptide complement(187229..188797) FT /locus_tag="TGAM_0197" FT /product="intein" FT gene complement(190344..191402) FT /locus_tag="TGAM_0198" FT /note="tg0198" FT CDS complement(190344..191402) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0198" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A388" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32700.1" FT /translation="MRRADGVGRMNAKLLPLLVLSLLFLSLPGLAQSEEYTLPGGNYNN FT LGLEGQLMMSINVTLINLAPYPKFIVLNPFYDFKIYRRNNGEWLTGKFNETRGKMVYHV FT SPETMNNTLNYRVGFWIYPYETVKVQFSITEAHHYYIQLKDYRDSCPTNVGLYILRYEN FT GTLTGGEINTYENLNHPICGVAYPQLLNYPLVIRFNEVLPSMDGYIKMLRYEGIVKFKL FT TDVPDRADDNSTSNVEFPLFFAVSQPVILYNATMTDYQPPYSMKYSDYLNFILGYRGFT FT TPQVSQEKPRRPSNGLFKLTDSLLSGTTIKKPEVNAPVVKPLDFPIWVVYMGKDVNTLE FT ISYHVEWNNYRG" FT gene complement(191389..192900) FT /locus_tag="TGAM_0199" FT /note="tg0199" FT CDS complement(191389..192900) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0199" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="InterPro:IPR007509" FT /db_xref="UniProtKB/TrEMBL:C5A389" FT /inference="protein motif:CDD:DUF515, Protein of unknown FT function (DUF515)" FT /inference="protein motif:COG:COG1627 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF04415 DUF515 FT InterPro:IPR007509 Protein of unknown function DUF515" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32701.1" FT /translation="MEFKKLTDLTRGITITLMVVFTVAEDIEAKIRRLRELGKASAEPE FT TPPTPVSKPSPKPKPPRRIRRLSNIREREKKRRILIGASILIILILIVSFAAYSWYSSQ FT KEKELRDAKQRKLAELNSYFKGDILKTSYGQTTYNELKAKIETAKSVEEVNSIDIKSAY FT LQVYQKYKAELEEKQRQEELKRLNQAKEQKKMEIKLLFEPLLAQPLPTQIREHALQVEN FT ELLAQVENASSINAVNSTDPTPYLLQLWREYYTYRVDSIKGDYVVLEFNGHKKIYTKEQ FT AKAMLSGIQDYTVLMQYNVKEVQFVKMALLLTRDRVVGGFIEPGAKIMIFAQNATSRQY FT LQIADLGYVDSVLLPADAGIINLNEQQGSSSSSNSNSNSQSSSSSQNSASAGDTTVSTG FT GSSSTSSSSSQSYSESSSASYYYSVNLGEIMRAISSGKIQGSEEAIRQLENYGDNLLAL FT EQRLQLQNVPNGVPFLVIVEVPSVYVPDVLSHINTVYIGELVEKS" FT gene 192927..193247 FT /locus_tag="TGAM_0200" FT /note="tg0200" FT CDS 192927..193247 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0200" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR023811" FT /db_xref="UniProtKB/TrEMBL:C5A390" FT /protein_id="ACS32702.1" FT /translation="MERLEARVVEIRGRCPVFKLGDRIVVEGPRIKLEETDAICTHAFA FT SLLPYIVALRKGIKPSELGLGKGETAYVQCLDPGPPYTDGGTVIFEITVIRDEAEESLE FT GR" FT gene 193270..194289 FT /locus_tag="TGAM_0201" FT /note="tg0201" FT CDS 193270..194289 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0201" FT /product="GTP-binding protein, HSR1-related GTPase" FT /db_xref="GOA:C5A391" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR023179" FT /db_xref="UniProtKB/TrEMBL:C5A391" FT /inference="protein motif:CDD:COG1160, Predicted GTPases FT [General function prediction only]" FT /inference="protein motif:CDD:COG1161, Predicted GTPases FT [General function prediction only]" FT /inference="protein motif:CDD:EngA2, EngA2 subfamily" FT /inference="protein motif:CDD:Era, Era subfamily" FT /inference="protein motif:CDD:HSR1_MMR1, HSR1/MMR1" FT /inference="protein motif:CDD:MJ1464, MJ1464" FT /inference="protein motif:CDD:MMR_HSR1, GTPase of unknown FT function" FT /inference="protein motif:CDD:NGP_1, NGP-1" FT /inference="protein motif:CDD:Nucleostemin_like, FT Nucleostemin-like" FT /inference="protein motif:CDD:YjeQ_engC, YjeQ/EngC" FT /inference="protein motif:CDD:YlqF, YlqF" FT /inference="protein motif:CDD:YlqF_related_GTPase, FT YlqF-related GTPases" FT /inference="protein motif:CDD:YqeH, YqeH" FT /inference="protein motif:COG:COG1161 Predicted GTPases; R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR11089 GTP-BINDING FT PROTEIN-RELATED" FT /inference="protein motif:HMMPanther:PTHR11089:SF3 FT GTP-BINDING PROTEIN-RELATED" FT /inference="protein motif:HMMPfam:PF01926 MMR_HSR1 FT InterPro:IPR002917 GTP-binding protein, HSR1-related FT GO:Molecular Function:GTP binding (GO:0005525), Cellular FT Component:intracellular (GO:0005622)" FT /inference="protein motif:HMMTigr:TIGR00650 FT MG442:GTP-binding conserved hypothetical pr FT InterPro:IPR005289 GTP-binding GO:Molecular Function:GTP FT binding (GO:0005525)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /protein_id="ACS32703.1" FT /translation="MIVEVVDARDPIGTRNRKLERLVQEEGKPLLIVMNKADLVPREWA FT EEYKRKSEIPVVFISARERKGTGILRRELKKLAKPLLGEKEKVKVALIGYPNVGKSTII FT NTLKGKRAVGTAPIPGYTKGKHLIRLSKKLWLLDSPGVVPIDDFDELVIKGGFPADKIE FT EPVKPALKLISRILETRREAITEKFGIEEFENEEEILRRIGEKRGLIKAGGEVDLEETA FT RWLLREWQTGRFTLFASEEEKSQDFIWDFKDVLEGVERELLLDPRRILWRYGDELREKL FT DNQKRAGVREIEGITVGIATGFKKCDSALKFLEELTGKTAIANECFGKKWKGVIAILE" FT gene 194295..195392 FT /locus_tag="TGAM_0202" FT /note="tg0202" FT CDS 194295..195392 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0202" FT /product="SAM-dependent RNA methylase, putative" FT /note="Belongs to UPF0020 family, contains 1 THUMP domain" FT /db_xref="GOA:C5A392" FT /db_xref="InterPro:IPR000241" FT /db_xref="InterPro:IPR004114" FT /db_xref="UniProtKB/TrEMBL:C5A392" FT /inference="protein motif:CDD:COG0116, Predicted FT N6-adenine-specific DNA methylase [DNA replication, FT recombination, and repair]" FT /inference="protein motif:CDD:COG1041, Predicted DNA FT modification methylase [DNA replication, recombination, and FT repair]" FT /inference="protein motif:CDD:THUMP, THUMP domain" FT /inference="protein motif:CDD:UPF0020, Putative RNA FT methylase family UPF0020" FT /inference="protein motif:COG:COG0116 Predicted FT N6-adenine-specific DNA methylase; L Replication, FT recombination and repair" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR14911 FAMILY NOT FT NAMED" FT /inference="protein motif:HMMPanther:PTHR14911:SF1 FT SUBFAMILY NOT NAMED" FT /inference="protein motif:HMMPfam:PF01170 UPF0020 FT InterPro:IPR000241 Putative RNA methylase GO:Molecular FT Function:molecular function unknown (GO:0005554)" FT /inference="protein motif:HMMPfam:PF02926 THUMP FT InterPro:IPR004114 THUMP" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:ScanRegExp:PS01261 UPF0020 FT InterPro:IPR000241 Putative RNA methylase GO:Molecular FT Function:molecular function unknown (GO:0005554)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32704.1" FT /translation="MRLILTTSRGIEDFARAEVERLLSDLGVPFRVEEKPLGVEGRVLT FT EVDRAFYTDEKGRKRELSVSTYLNERSRLLHRVIVEIASERFEGIGEDEPERALRRIKE FT FVASLPVERFVKVSESFAVRSFRRGEHKITSVDIAKTVGKAIFERLERFGTPKVNLDHP FT AVIFRAELIGEVFFLGIDTTGDSSLHKRPWRVYDHPAHLKASIANALIELAEPDGGPFI FT DPFCGSGTIPIELALRGYGGKIIGLEKFRKHLNGAKMNALSAGVLEGIEFILGDATRLS FT DYVESVDFAVSNLPYGLKIGRKSAIPKLYMDFFGELAKVLEKRGVFITTEKRAIERAIE FT ENGFEVKHHRLIGHGGLMVHTYVIG" FT gene 195385..195816 FT /locus_tag="TGAM_0203" FT /note="tg0203" FT CDS 195385..195816 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0203" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A393" FT /protein_id="ACS32705.1" FT /translation="MGKTFKRIFPTFLGGQMKARSLVLVLAVLAVVLGGVGYYAFNHYS FT FNYEWRTNLKDYKKYHLISDSTLNGYVKAEGEVSVYILTKEDFRRLKEGEPFNYYRAWE FT HVEKVEFNDVKIPSGDYILVVKNEGKGMQWISVKLVDRK" FT gene 195901..197100 FT /gene="pstS" FT /locus_tag="TGAM_0204" FT /note="tg0204" FT CDS 195901..197100 FT /codon_start=1 FT /transl_table=11 FT /gene="pstS" FT /locus_tag="TGAM_0204" FT /product="ABC-type phosphate transport system, periplasmic FT component (PstS)" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A394" FT /db_xref="InterPro:IPR005673" FT /db_xref="InterPro:IPR024370" FT /db_xref="UniProtKB/TrEMBL:C5A394" FT /inference="protein motif:CDD:PstS, ABC-type phosphate FT transport system, periplasmic component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG0226 ABC-type phosphate FT transport system, periplasmic component; P Inorganic ion FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.190.10 no FT description" FT /inference="protein motif:HMMPfam:PF01547 SBP_bac_1 FT InterPro:IPR006059 Bacterial extracellular solute-binding FT protein, family 1 GO:Molecular Function:transporter FT activity (GO:0005215), Biological Process:transport FT (GO:0006810)" FT /inference="protein motif:HMMTigr:TIGR00975 FT 3a0107s03:phosphate ABC transporter, phos FT InterPro:IPR005673 Periplasmic phosphate binding protein FT GO:Molecular Function:inorganic phosphate transporter FT activity (GO:0005315), Biological Process:phosphate FT transport (GO:0006817), Molecular Function:phosphate FT transporter activity (GO:0015114)" FT /inference="protein motif:superfamily:SSF53850 Periplasmic FT binding protein-like II" FT /protein_id="ACS32706.1" FT /translation="MVIFSSVKPMKRLGALLLVFLLGIAVLSSGCINSKGESTTPSSTP FT SSTATPKQSSTTSSSSAKVIVIRTTGATFPQYQIQKWIEEYMKTHPNVKIEYEGGGSGH FT GQEAFLKGLTDIGRTDPPVKESTWKKFLQTGDQPLQFPEVVGAVVVAYNVPGVDELKLD FT GETLAKIFMGEIEYWDDEAIKKLNPNAKLPHEKIIVVHRSDASGTTAIFTTYLSLVSKE FT FAEKVGAGKLVNWPVDKMGRGIGGKGNPGVVQALKSTKYSIAYTELSFAIEENLKVVAL FT KNKAGKFVKPTDETIKAAVSAVKTYIPEPTEGYKEDLKQLLNAPGENAYPIVAFTHILV FT WENRGGKHYSPEKAKAIKDFLRWILTEGQKKEHIAPGYVGLPKDVAEIGLKAVDMIQTG FT " FT gene 197125..197913 FT /locus_tag="TGAM_0205" FT /note="tg0205" FT CDS 197125..197913 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0205" FT /product="Predicted AP endonuclease" FT /note="May be also related to Xylose isomerase" FT /db_xref="GOA:C5A395" FT /db_xref="InterPro:IPR012307" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/TrEMBL:C5A395" FT /inference="protein motif:CDD:AP_endonuc_2, AP endonuclease FT family 2" FT /inference="protein motif:CDD:IolE, Sugar phosphate FT isomerases/epimerases [Carbohydrate transport and FT metabolism]" FT /inference="protein motif:COG:COG1082 Sugar phosphate FT isomerases/epimerases; G Carbohydrate transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.20.150 no FT description" FT /inference="protein motif:HMMPfam:PF01261 AP_endonuc_2 FT InterPro:IPR012307 Xylose isomerase-like TIM barrel" FT /inference="protein motif:superfamily:SSF51658 Xylose FT isomerase-like" FT /protein_id="ACS32707.1" FT /translation="MKVGVNTCIVKEVSGRGFPLDELNVEVLELGFDDVEVLTEEGINW FT NVLKNLAGLEVEFTLHAPTSDGRNVSVDLGHYSRMNIVTMERVFKVASALDARIVVVHG FT GDIRGSYHRAFTNTRRQLMEISAIAEDYGVKLLVENLTDSRIGAFPHELLPFLEENVGI FT CLDVGHAFLTAMKYGIPMDEFALLKADEIHVHDNNGVMDEHLPPGEGMIGRNYTGRLIG FT AVEPEYAVLEIRRYSRPESVFGAIDFVRSLKKIKVKGVVV" FT gene 197910..198824 FT /gene="pstC" FT /locus_tag="TGAM_0206" FT /note="tg0206" FT CDS 197910..198824 FT /codon_start=1 FT /transl_table=11 FT /gene="pstC" FT /locus_tag="TGAM_0206" FT /product="ABC-type phosphate transport system, permease FT component (pstC)" FT /note="7 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A396" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR011864" FT /db_xref="UniProtKB/TrEMBL:C5A396" FT /inference="protein motif:CDD:COG4590, ABC-type FT uncharacterized transport system, permease component FT [General function prediction only]" FT /inference="protein motif:CDD:PstA, ABC-type phosphate FT transport system, permease component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:CDD:PstC, ABC-type phosphate FT transport system, permease component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG0573 ABC-type phosphate FT transport system, permease component; P Inorganic ion FT transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:HMMTigr:TIGR02138 FT phosphate_pstC:phosphate ABC transpor InterPro:IPR011864 FT Phosphate ABC transporter, permease protein PstC FT GO:Molecular Function:inorganic phosphate transporter FT activity (GO:0005315), Biological Process:phosphate FT transport (GO:0006817), Cellular Component:integral to FT membrane (GO:0016021)" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /protein_id="ACS32708.1" FT /translation="MRDTFKAMTFPAVLAVFLLFAGMLFVYFTNAMPAFHRFGIDVYLK FT NVWRASEEPSEELYGVAAAIWGSVYTSLIAIAIALPLSVSYSVFVVDYAPKWLKNPLII FT ISDIMAGLPTIIYGLWGALVLVPFLREHVMKPLYEHLSFIPLFSYPPTTGYSYFSAGVL FT LAIMVTPFASAIIREAYSMVPFTYREAVYALGATRFEATKILIGYIRPAIVSGTILAFG FT RAIGETVAVSLVIGNTFNMTWQLFAPGYTVSSLIANQFGNAFIYEYMTPVLYAAGLALF FT LIGLAVNLLGLRILGRWEENVKA" FT gene 198811..199644 FT /gene="pstA" FT /locus_tag="TGAM_0207" FT /note="tg0207" FT CDS 198811..199644 FT /codon_start=1 FT /transl_table=11 FT /gene="pstA" FT /locus_tag="TGAM_0207" FT /product="ABC-type phosphate transport system, permease FT component (pstA)" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A397" FT /db_xref="InterPro:IPR000515" FT /db_xref="InterPro:IPR005672" FT /db_xref="UniProtKB/TrEMBL:C5A397" FT /inference="protein motif:CDD:CysU, ABC-type sulfate FT transport system, permease component [Posttranslational FT modification, protein turnover, chaperones]" FT /inference="protein motif:CDD:PstA, ABC-type phosphate FT transport system, permease component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:CDD:PstC, ABC-type phosphate FT transport system, permease component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG0581 ABC-type phosphate FT transport system, permease component; P Inorganic ion FT transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component" FT /inference="protein motif:HMMTigr:TIGR00974 FT 3a0107s02c:phosphate ABC transporter, per FT InterPro:IPR005672 Phosphate transport system permease FT protein 2" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component" FT /protein_id="ACS32709.1" FT /translation="MSKLNARKLKEKVFLACVGVLTFLAILPLFHIILSVAARGLPVIA FT ERGGKFITGTLSEGGIGPAIAGTFLLTFLAALFGLPVAFLVGLYAYEFPNSTIGRWTKT FT LLQIMLEFPTILVGVFVMQILVIPMGTYSAIAGALALAIILTPYVAVYTHEAMREIPFT FT YREAAFSLGLTRAKVLFRVLAPMAKRGILTGVLIGLAKVAGETAPLLFTAGGLYESYPD FT SITRPVGAIPLLIYQLVQSPSKADHQTAWGASLVLLLIFLGIFIPIRLSLREVKL" FT gene 199641..200399 FT /gene="pstB" FT /locus_tag="TGAM_0208" FT /note="tg0208" FT CDS 199641..200399 FT /codon_start=1 FT /transl_table=11 FT /gene="pstB" FT /locus_tag="TGAM_0208" FT /product="ABC-type phosphate transport system, ATPase FT component (pstB)" FT /EC_number="3.6.3.27" FT /db_xref="GOA:C5A398" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR005670" FT /db_xref="InterPro:IPR015850" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:C5A398" FT /inference="protein motif:BlastProDom:PD000006 FT PSTB_PYRFU_Q8U242; InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:CDD:AbcC, ABC-type metal ion FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ABCC_ATM1_transporter, ATM1 FT is an ABC transporter that is expressed in the FT mitochondria" FT /inference="protein motif:CDD:ABCC_bacteriocin_exporters, FT ABC-type bacteriocin exporters" FT /inference="protein motif:CDD:ABCC_CFTR2, The CFTR FT subfamily domain 2" FT /inference="protein motif:CDD:ABCC_cytochrome_bd, The CYD FT subfamily implicated in cytochrome bd biogenesis" FT /inference="protein motif:CDD:ABCC_Glucan_exporter_like, FT Glucan exporter ATP-binding protein" FT /inference="protein motif:CDD:ABCC_Hemolysin, The FT ABC-transporter hemolysin B is a central component of the FT secretion machinery that translocates the toxin, hemolysin FT A, in a Sec-independent fashion across both membranes of E" FT /inference="protein motif:CDD:ABCC_MRP_domain1, Domain 1 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_domain2, Domain 2 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_Like, The MRP FT (Mutidrug Resistance Protein)-like transporters are FT involved in drug, peptide, and lipid export" FT /inference="protein motif:CDD:ABCC_MsbA, MsbA is an FT essential ABC transporter, closely related to eukaryotic FT MDR proteins" FT /inference="protein motif:CDD:ABCC_NFT1, Domain 2 of NFT1 FT (New full-length MRP-type transporter 1)" FT /inference="protein motif:CDD:ABCC_Protease_Secretion, This FT family represents the ABC component of the protease FT secretion system PrtD, a 60-kDa integral membrane protein FT sharing 37% identity with HlyB, the ABC component of the FT alpha-hemolysin secretion pathway, in the C-terminal FT domain" FT /inference="protein motif:CDD:ABCC_SUR1_N, The SUR domain FT 1" FT /inference="protein motif:CDD:ABCC_TAP, TAP, the FT Transporter Associated with Antigen Processing" FT /inference="protein motif:CDD:ABCF_EF-3, ABCF_EF-3 FT Elongation factor 3 (EF-3) is a cytosolic protein required FT by fungal ribosomes for in vitro protein synthesis and for FT in vivo growth" FT /inference="protein motif:CDD:ABCG_EPDR, ABCG transporters FT are involved in eye pigment (EP) precursor transport, FT regulation of lipid-trafficking mechanisms, and pleiotropic FT drug resistance (DR)" FT /inference="protein motif:CDD:ABCG_White, The White FT subfamily represents ABC transporters homologous to the FT Drosophila white gene, which acts as a dimeric importer for FT eye pigment precursors" FT /inference="protein motif:CDD:ABC_ATPase, ABC (ATP-binding FT cassette) transporter nucleotide-binding domain" FT /inference="protein motif:CDD:ABC_BcrA_bacitracin_resist, FT The BcrA subfamily represents ABC transporters involved in FT peptide antibiotic resistance" FT /inference="protein motif:CDD:ABC_Carb_Monos_I, This family FT represents the domain I of the carbohydrate uptake proteins FT that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Monos_II, This FT family represents domain II of the carbohydrate uptake FT proteins that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Solutes_like, ABC FT Carbohydrate and Solute Transporters-like subgroup" FT /inference="protein motif:CDD:ABC_CcmA_heme_exporter, CcmA, FT the ATP-binding component of the bacterial CcmAB FT transporter" FT /inference="protein motif:CDD:ABC_Class3, This class is FT comprised of all BPD (Binding Protein Dependent) systems FT that are largely represented in archaea and eubacteria and FT are primarily involved in scavenging solutes from the FT environment" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain1, FT Domain I of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain2, FT Domain II of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_CysA_sulfate_importer, FT Part of the ABC transporter complex cysAWTP involved in FT sulfate import" FT /inference="protein motif:CDD:ABC_DrrA, DrrA is the FT ATP-binding protein component of a bacterial exporter FT complex that confers resistance to the antibiotics FT daunorubicin and doxorubicin" FT /inference="protein motif:CDD:ABC_drug_resistance_like, FT ABC-type multidrug transport system, ATPase component" FT /inference="protein motif:CDD:ABC_DR_subfamily_A, This FT family of ATP-binding proteins belongs to a multisubunit FT transporter involved in drug resistance (BcrA and DrrA), FT nodulation, lipid transport, and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_FeS_Assembly, ABC-type FT transport system involved in Fe-S cluster assembly, ATPase FT component" FT /inference="protein motif:CDD:ABC_FtsE_transporter, FtsE is FT a hydrophilic nucleotide-binding protein that binds FtsX to FT form a heterodimeric ATP-binding cassette (ABC)-type FT transporter that associates with the bacterial inner FT membrane" FT /inference="protein motif:CDD:ABC_HisP_GlnQ_permeases, HisP FT and GlnQ are the ATP-binding components of the bacterial FT periplasmic histidine and glutamine permeases, repectively" FT /inference="protein FT motif:CDD:ABC_Iron-Siderophores_B12_Hemin, ABC FT transporters, involved in the uptake of siderophores, heme, FT and vitamin B12, are widely conserved in bacteria and FT archaea" FT /inference="protein motif:CDD:ABC_KpsT_Wzt, ABC_KpsT_Wzt FT The KpsT/Wzt ABC transporter subfamily is involved in FT extracellular polysaccharide export" FT /inference="protein motif:CDD:ABC_MalK_N, The N-terminal FT ATPase domain of the maltose transporter, MalK" FT /inference="protein motif:CDD:ABC_Metallic_Cations, ABC FT component of the metal-type transporters" FT /inference="protein FT motif:CDD:ABC_MetN_methionine_transporter, MetN (also known FT as YusC) is an ABC-type transporter encoded by metN of the FT metNPQ operon in Bacillus subtilis that is involved in FT methionine transport" FT /inference="protein motif:CDD:ABC_MJ0796_Lo1CDE_FtsE, This FT family is comprised of MJ0796 ATP-binding cassette, FT macrolide-specific ABC-type efflux carrier (MacAB), and FT proteins involved in cell division (FtsE), and release of FT liporoteins from the cytoplasmic membrane (LolCDE)" FT /inference="protein motif:CDD:ABC_Mj1267_LivG_branched, The FT Mj1267/LivG ABC transporter subfamily is involved in the FT transport of the hydrophobic amino acids leucine, FT isoleucine and valine" FT /inference="protein motif:CDD:ABC_ModC_like, Archeal FT protein closely related to ModC" FT /inference="protein FT motif:CDD:ABC_ModC_molybdenum_transporter, ModC is an FT ABC-type transporter and the ATPase component of a FT molybdate transport system that also includes the FT periplasmic binding protein ModA and the membrane protein FT ModB" FT /inference="protein motif:CDD:ABC_MTABC3_MDL1_MDL2, MTABC3 FT (also known as ABCB6) is a mitochondrial ATP-binding FT cassette protein involved in iron homeostasis and one of FT four ABC transporters expressed in the mitochondrial inner FT membrane, the other three being MDL1(ABC7), MDL2, and ATM1" FT /inference="protein motif:CDD:ABC_NatA_like, Similar in FT sequence to NatA, this is the ATPase component of a FT bacterial ABC-type Na+ transport system called NatAB, which FT catalyzes ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled to proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NatA_sodium_exporter, FT NatA is the ATPase component of a bacterial ABC-type Na+ FT transport system called NatAB, which catalyzes FT ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NikE_OppD_transporters, FT The ABC transporter subfamily specific for the transport of FT dipeptides, oligopeptides (OppD), and nickel (NikDE)" FT /inference="protein motif:CDD:ABC_NrtD_SsuB_transporters, FT NrtD and SsuB are the ATP-binding subunits of the bacterial FT ABC-type nitrate and sulfonate transport systems, FT respectively" FT /inference="protein motif:CDD:ABC_OpuCA_Osmoprotection, FT OpuCA is a the ATP binding component of a bacterial solute FT transporter that serves a protective role to cells growing FT in a hyperosmolar environment" FT /inference="protein motif:CDD:ABC_Org_Solvent_Resistant, FT ABC (ATP-binding cassette) transport system involved in FT resistant to organic solvents" FT /inference="protein motif:CDD:ABC_PDR_domain1, The FT pleiotropic drug resistance (PDR) family of ATP-binding FT cassette (ABC) transporters" FT /inference="protein motif:CDD:ABC_PDR_domain2, The FT pleiotropic drug resistance-like (PDR) family of FT ATP-binding cassette (ABC) transporters" FT /inference="protein motif:CDD:ABC_PhnC_transporter, FT ABC-type phosphate/phosphonate transport system" FT /inference="protein motif:CDD:ABC_PotA_N, PotA is an FT ABC-type transporter and the ATPase component of the FT spermidine/putrescine-preferential uptake system consisting FT of PotA, -B, -C, and -D" FT /inference="protein motif:CDD:ABC_Pro_Gly_Bertaine, This FT family comprises the glycine betaine/L-proline ATP binding FT subunit in bacteria and its equivalents in archaea" FT /inference="protein FT motif:CDD:ABC_PstB_phosphate_transporter, Phosphate uptake FT is of fundamental importance in the cell physiology of FT bacteria because phosphate is required as a nutrient" FT /inference="protein motif:CDD:ABC_putative_ATPase, This FT subfamily is involved in drug resistance, nodulation, lipid FT transport, and bacteriocin and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_subfamily_A, The ABCA FT subfamily mediates the transport of a variety of lipid FT compounds" FT /inference="protein FT motif:CDD:ABC_ThiQ_thiamine_transporter, ABC-type thiamine FT tranport system" FT /inference="protein motif:CDD:ABC_TM1139_LivF_branched, FT LivF (TM1139) is part of the LIV-I bacterial ABC-type FT two-component transport system that imports neutral, FT branched-chain amino acids" FT /inference="protein motif:CDD:ABC_tran, ABC transporter" FT /inference="protein motif:CDD:ABC_UvrA_I, The excision FT repair protein UvrA domain I" FT /inference="protein motif:CDD:ABC_YhbG, The ABC FT transporters belonging to the YhbG family are similar to FT members of the Mj1267_LivG family, which is involved in the FT transport of branched-chain amino acids" FT /inference="protein motif:CDD:AppF, ABC-type oligopeptide FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ArpD, ABC-type FT protease/lipase transport system, ATPase and permease FT components [General function prediction only]" FT /inference="protein motif:CDD:ArtP, ABC-type arginine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ATM1, ABC-type transport FT system involved in Fe-S cluster assembly, permease and FT ATPase components [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:CbiO, ABC-type cobalt FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:CcmA, ABC-type multidrug FT transport system, ATPase component [Defense mechanisms]" FT /inference="protein motif:CDD:CcmA, ABC-type transport FT system involved in cytochrome c biogenesis, ATPase FT component [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:CeuD, ABC-type enterochelin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG1123, ATPase components of FT various ABC-type transport systems, contain duplicated FT ATPase [General function prediction only]" FT /inference="protein motif:CDD:COG3638, ABC-type FT phosphate/phosphonate transport system, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:COG3845, ABC-type FT uncharacterized transport systems, ATPase components FT [General function prediction only]" FT /inference="protein motif:CDD:COG4136, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4152, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4172, ABC-type FT uncharacterized transport system, duplicated ATPase FT component [General function prediction only]" FT /inference="protein motif:CDD:COG4178, ABC-type FT uncharacterized transport system, permease and ATPase FT components [General function prediction only]" FT /inference="protein motif:CDD:COG4181, Predicted ABC-type FT transport system involved in lysophospholipase L1 FT biosynthesis, ATPase component [Secondary metabolites FT biosynthesis, transport, and catabolism]" FT /inference="protein motif:CDD:COG4559, ABC-type hemin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG4586, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4619, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4674, Uncharacterized FT ABC-type transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:CydC, ABC-type transport FT system involved in cytochrome bd biosynthesis, fused ATPase FT and permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CydD, ABC-type transport FT system involved in cytochrome bd biosynthesis, ATPase and FT permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CysA, ABC-type FT sulfate/molybdate transport systems, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:DppD, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:DppF, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:FepC, ABC-type FT cobalamin/Fe3+-siderophores transport systems, ATPase FT components [Inorganic ion transport and metabolism / FT Coenzyme metabolism]" FT /inference="protein motif:CDD:FtsE, Predicted ATPase FT involved in cell division [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:GlnQ, ABC-type polar amino FT acid transport system, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:HisP, ABC-type histidine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:LivF, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:LivG, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:MalK, ABC-type sugar FT transport systems, ATPase components [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:CDD:MdlB, ABC-type multidrug FT transport system, ATPase and permease components [Defense FT mechanisms]" FT /inference="protein motif:CDD:MglA, ABC-type sugar FT transport system, ATPase component [Carbohydrate transport FT and metabolism]" FT /inference="protein motif:CDD:ModC, ABC-type molybdate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ModF, ABC-type molybdenum FT transport system, ATPase component/photorepair protein PhrA FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NatA, ABC-type Na+ transport FT system, ATPase component [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:OpuBA, ABC-type FT proline/glycine betaine transport systems, ATPase FT components [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:PhnL, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PotA, ABC-type FT spermidine/putrescine transport systems, ATPase components FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ProV, ABC-type FT proline/glycine betaine transport system, ATPase component FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PstB, ABC-type phosphate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:SalX, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapD, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapF, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SufC, ABC-type transport FT system involved in Fe-S cluster assembly, ATPase component FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:SunT, ABC-type FT bacteriocin/lantibiotic exporters, contain an N-terminal FT double-glycine peptidase domain [Defense mechanisms]" FT /inference="protein motif:CDD:TagH, ABC-type FT polysaccharide/polyol phosphate transport system, ATPase FT component [Carbohydrate transport and metabolism / Cell FT envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:TauB, ABC-type FT nitrate/sulfonate/bicarbonate transport system, ATPase FT component [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:TauB, ABC-type taurine FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ThiQ, ABC-type thiamine FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:Ttg2A, ABC-type transport FT system involved in resistance to organic solvents, ATPase FT component [Secondary metabolites biosynthesis, transport, FT and catabolism]" FT /inference="protein motif:CDD:Uup, ATPase components of ABC FT transporters with duplicated ATPase domains [General FT function prediction only]" FT /inference="protein motif:CDD:YhbG, ABC-type (unclassified) FT transport system, ATPase component [General function FT prediction only]" FT /inference="protein motif:CDD:ZnuC, ABC-type Mn/Zn FT transport systems, ATPase component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG1117 ABC-type phosphate FT transport system, ATPase component; P Inorganic ion FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR19222 ATP-BINDING FT CASSETTE TRANSPORTER" FT /inference="protein motif:HMMPfam:PF00005 ABC_tran FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:HMMTigr:TIGR00972 FT 3a0107s01c2:phosphate ABC transporter, A InterPro:IPR005670 FT Phosphate transport system permease protein 1 GO:Molecular FT Function:inorganic phosphate transporter activity FT (GO:0005315), Biological Process:phosphate transport FT (GO:0006817), Molecular Function:phosphate transporter FT activity (GO:0015114), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50100 DA_BOX FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ProfileScan:PS50101 ATP_GTP_A2" FT /inference="protein motif:ProfileScan:PS50893 FT ABC_TRANSPORTER_2 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ScanRegExp:PS00211 FT ABC_TRANSPORTER_1 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /protein_id="ACS32710.1" FT /translation="MNYAIETRNLNVYYSSNHVIKGVDLEIPEKGVFALMGPSGCGKST FT MLRTFNRLIELNESAKVEGEVRLFGKNIYSPDVDPIEVRKQVGMVFQYPNPFPHLTIYE FT NVAIGLKLNNLLPKDEIPKRVEWALKKSALWEEVKDRLNDYPSNLSGGQRQRLVIARAL FT AMKPKILLMDEPTANIDPVGTAKIEELLFELKDEYTIVLVTHSPAQAARVSDWVAFLYL FT GKLIEVGPTRKVFENPEHELTEKYVTGALG" FT gene 200406..200996 FT /gene="phoU-1" FT /locus_tag="TGAM_0209" FT /note="tg0209" FT CDS 200406..200996 FT /codon_start=1 FT /transl_table=11 FT /gene="phoU-1" FT /locus_tag="TGAM_0209" FT /product="Phosphate ABC transporter, regulatory protein FT (phoU)" FT /db_xref="InterPro:IPR008170" FT /db_xref="UniProtKB/TrEMBL:C5A399" FT /inference="protein motif:CDD:PhoU, Phosphate uptake FT regulator [Inorganic ion transport and metabolism]" FT /inference="protein motif:COG:COG0704 Phosphate uptake FT regulator; P Inorganic ion transport and metabolism" FT /inference="protein motif:HMMPfam:PF01895 PhoU FT InterPro:IPR008170 PhoU" FT /protein_id="ACS32711.1" FT /translation="MRKLLDMGIEQLKKMIREMANGSVEALESARRSIEGDFDSAEEIS FT SRLHIIRSDVLELATELLVRYSPVASDLRFIQSAIDVSYDLYRISRYAMEIERTARIVK FT GPVELSRKAFPLTEEAVRLSVDAFRELDETLVGRLLELDRIIDDYYLRSLEALNENPEK FT AADALIMRHLERISDHAKEIGAKVVYIKEGRRM" FT gene 201114..202067 FT /locus_tag="TGAM_0210" FT /note="tg0210" FT CDS 201114..202067 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0210" FT /product="Hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3A0" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32712.1" FT /translation="MVIVKKVLVKENPIGLMVMGVVFALFFAFIATSVLTSFGSFAPAG FT FGMAFILFPLLFVGILLFVGGRLLAGGKKASSLFSQATVSETSISFPEELEYEVGRVFL FT EGYWTYTTTSTGSGTTSSRNYRTRRSFRPAGKARGLEVELPKEPFRIELKADGTGTIDA FT PAIRILSEPYKNALVIFLTDEGLVEGESSLNLSKGNDMVQVTFRGEGKMLRGRVWAELS FT KARGVRIEYGSGNLWKTVAKGKGSFEFSFSTLPEEKILIFSHYNTVTPLSILKKLGGGP FT MILGHGTFELKAVLDVPLARDIVERAIFEVVLPHEG" FT gene 202070..203005 FT /locus_tag="TGAM_0211" FT /note="tg0211" FT CDS 202070..203005 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0211" FT /product="Hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3A1" FT /protein_id="ACS32713.1" FT /translation="MRVVPLSPKFFPRFSTLAALALLFSAVLLKLYLSHFEQPVNVGSV FT DRLLIGAAFLILTAAIGWIISQSRRAFSFVGTVSVSGNSLVLSEKVEYETGRLLIEGRS FT YYLGKGRHYQIERRFVKSSSGKGSEIVPIWDEFFVEINGDGIGYFNAPAVLIKTGKYSG FT LALIFLTSRSETRFRDTMHLEINGEEATVEYHFDGGVLRGVVHSWLSKARGIRLYISGG FT GGEVKKKLGGGREFEFSYRLLPEEDTVLVAPFRFITPMMILGNLGGFLPSPREGLLFGH FT GTYELKAVLNVPFGRDVVEKVTFRIEAGKN" FT gene complement(203034..204188) FT /gene="trpS" FT /locus_tag="TGAM_0212" FT /note="tg0212" FT CDS complement(203034..204188) FT /codon_start=1 FT /transl_table=11 FT /gene="trpS" FT /locus_tag="TGAM_0212" FT /product="Tryptophanyl-tRNA synthetase (trpS)" FT /EC_number="6.1.1.2" FT /db_xref="GOA:C5A3A2" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002305" FT /db_xref="InterPro:IPR002306" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR020653" FT /db_xref="UniProtKB/TrEMBL:C5A3A2" FT /inference="protein motif:CDD:tRNA-synt_1b, tRNA FT synthetases class I (W and Y)" FT /inference="protein motif:CDD:TrpRS_core, Tryptophanyl-tRNA FT synthetase (TrpRS) catalytic core domain" FT /inference="protein motif:CDD:TrpS, Tryptophanyl-tRNA FT synthetase [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:TyrRS_core, Tyrosinyl-tRNA FT synthetase (TyrRS) catalytic core domain" FT /inference="protein motif:CDD:Tyr_Trp_RS_core, FT Tyrosinyl-tRNA synthetase (TyrRS)/Tryptophanyl-tRNA FT synthetase (TrpRS) catalytic core domain" FT /inference="protein motif:COG:COG0180 Tryptophanyl-tRNA FT synthetase; J Translation, ribosomal structure and FT biogenesis" FT /inference="protein motif:FPrintScan:PR01039 TRNASYNTHTRP FT InterPro:IPR002306 Tryptophanyl-tRNA synthetase, class Ib FT GO:Molecular Function:tryptophan-tRNA ligase activity FT (GO:0004830), Molecular Function:ATP binding (GO:0005524), FT Biological Process:tryptophanyl-tRNA aminoacylation FT (GO:0006436)" FT /inference="protein motif:Gene3D:G3D.3.40.510.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10055 FT TRYPTOPHANYL-TRNA SYNTHETASE" FT /inference="protein motif:HMMPanther:PTHR10055:SF1 FT TRYPTOPHANYL-TRNA SYNTHETASE" FT /inference="protein motif:HMMPfam:PF00579 tRNA-synt_1b FT InterPro:IPR002305 Aminoacyl-tRNA synthetase, class Ib FT GO:Molecular Function:aminoacyl-tRNA ligase activity FT (GO:0004812), Molecular Function:ATP binding (GO:0005524), FT Biological Process:tRNA aminoacylation for protein FT translation (GO:0006418)" FT /inference="protein motif:HMMTigr:TIGR00233 FT trpS:tryptophanyl-tRNA synthetase InterPro:IPR002306 FT Tryptophanyl-tRNA synthetase, class Ib GO:Molecular FT Function:tryptophan-tRNA ligase activity (GO:0004830), FT Molecular Function:ATP binding (GO:0005524), Biological FT Process:tryptophanyl-tRNA aminoacylation (GO:0006436)" FT /inference="protein motif:ScanRegExp:PS00178 FT AA_TRNA_LIGASE_I InterPro:IPR001412 Aminoacyl-tRNA FT synthetase, class I GO:Molecular Function:aminoacyl-tRNA FT ligase activity (GO:0004812), Molecular Function:ATP FT binding (GO:0005524), Biological Process:tRNA FT aminoacylation for protein translation (GO:0006418)" FT /inference="protein motif:superfamily:SSF52374 FT Nucleotidylyl transferase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32714.1" FT /translation="MLKLEFKVTPWDVEGMVDYDKLIEQFGTSPLTDELLERTARLTKS FT ELPIYFRRRFFFSHRDYDKILEDYESGRGFFLYTGRGPSGPMHIGHIIPFYATKWLQEK FT FGVNLYIQITDDEKFLFKNLTLDETKRWAYENILDIIAVGFDPDKTFIFQDSEFTKIYE FT MALPIAKKINYSMAKAVFGFNEQSKIGMIFYPAIQAAPTFFERKRCLIPAAIDQDPYWR FT LQRDFAESLGYYKTAALHSKFVPPLTGLEGKMSASKPETAVYLTDDPEEAGKKIWRFAL FT TGGQPTLKEQREKGGNPEKCVVFKWLEIFFEEDDKKLMERYHACKAGELTCGECKRYLI FT KKVQEFLKEHQKKRKEAEKKVEKFKYTGELAREQWERAIPEKLR" FT gene 204362..205768 FT /locus_tag="TGAM_0213" FT /note="tg0213" FT CDS 204362..205768 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0213" FT /product="Prokaryotic ATPase, AAA superfamily" FT /note="Contains Archaeal ATPase domain (PF01637)" FT /db_xref="GOA:C5A3A3" FT /db_xref="InterPro:IPR004256" FT /db_xref="InterPro:IPR011335" FT /db_xref="InterPro:IPR011579" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A3A3" FT /inference="protein motif:CDD:Arch_ATPase, Archaeal ATPase" FT /inference="protein motif:CDD:COG1672, Predicted ATPase FT (AAA+ superfamily) [General function prediction only]" FT /inference="protein motif:CDD:DUF234, Archaea bacterial FT proteins of unknown function" FT /inference="protein motif:COG:COG1672 Predicted ATPase FT (AAA+ superfamily); R General function prediction only" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPfam:PF01637 Arch_ATPase FT InterPro:IPR011579 Prokaryotic ATPase" FT /inference="protein motif:HMMPfam:PF03008 DUF234 FT InterPro:IPR004256 Protein of unknown function DUF234, FT DEXX-box ATPase C-terminal GO:Molecular Function:molecular FT function unknown (GO:0005554)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /inference="protein motif:superfamily:SSF52980 Restriction FT endonuclease-like" FT /protein_id="ACS32715.1" FT /translation="MLREFVNRREEIKTLKDLWRKEGLTLALVYGRRRVGKTRLLEEFS FT RDKNRVFVIFEDKPREYNFRLLSKKVSEFIGFNVEVRDFPSLFALLKRLTNERVLVVLD FT EFSYLIKKDRGVLSELSRAIEENRDLNALIVVSGSHVSLLEREFFDYSSPIYGRSDANI FT KVRPLKFKHLYEWFNASTEDLVKIYSVTGGTPKYLEFFSGRNVEEEIKANFFNSSAFLF FT REARALLSEELRELSTYLAILEAIARGNTKVTQIANFCYMKENQVVPYLRVLGELGIVR FT KVTPLFGKKGIYEIADNYFLFWSRFVSPYYEEIEGNFTEAAVFDFERNFNTFLGRPFEE FT IAREFLIEANRKNLLPFRFTKLGRWWRRGEEIDIVALDEGSKKALFVEVKWSDLTAGKA FT RKVLRQLEKKAELVGLEDYEKHYGIIAKRIEGKENLGLAFDLGDFDEVFTKRLSKTAGS FT NDSLSIGGES" FT gene 205830..206021 FT /locus_tag="TGAM_0214" FT /note="tg0214" FT CDS 205830..206021 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0214" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF104 family" FT /db_xref="InterPro:IPR008203" FT /db_xref="InterPro:IPR024069" FT /db_xref="UniProtKB/TrEMBL:C5A3A4" FT /inference="protein motif:COG:COG2880 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF01954 DUF104 FT InterPro:IPR008203 Protein of unknown function DUF104" FT /protein_id="ACS32716.1" FT /translation="MEVVVEAVYENGVLKPKKKLNLPEGSEVRIKIVPTRVSERTFGIA FT KMSKREIDEIIEEIEDEW" FT gene 206023..206454 FT /locus_tag="TGAM_0215" FT /note="tg0215" FT CDS 206023..206454 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0215" FT /product="Nucleotide binding protein, putative, containing FT PIN domain" FT /db_xref="InterPro:IPR002716" FT /db_xref="InterPro:IPR006596" FT /db_xref="UniProtKB/TrEMBL:C5A3A5" FT /inference="protein motif:CDD:COG1848, Predicted nucleic FT acid-binding protein, contains PIN domain [General function FT prediction only]" FT /inference="protein motif:CDD:PIN, PIN domain" FT /inference="protein motif:COG:COG1848 Predicted nucleic FT acid-binding protein, contains PIN domain; R General FT function prediction only" FT /inference="protein motif:HMMPfam:PF01850 PIN FT InterPro:IPR002716 PilT protein, N-terminal" FT /inference="protein motif:HMMSmart:SM00670 no description FT InterPro:IPR006596 Nucleotide binding protein, PINc" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /protein_id="ACS32717.1" FT /translation="MNVFFDSNVLIYHLGGVELAKPLIESVEDGRIKGFINPIVASEVL FT FFYVKAKTGLKSYEIKKKPSVLADIKLEPVFELFSLFNMLDVNSEIVKNSKRAMESYYL FT LPNDALIVSTCEFYGIRRIATFDEDFKRVKWLEIISNQQ" FT gene 206503..207348 FT /locus_tag="TGAM_0216" FT /note="tg0216" FT CDS 206503..207348 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0216" FT /product="Transcription regulatory membrane protein, FT HTH-AraC family" FT /note="10 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3A6" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:C5A3A6" FT /inference="protein motif:COG:COG0697 Permeases of the FT drug/metabolite transporter (DMT) superfamily; G FT Carbohydrate transport and metabolism" FT /inference="protein motif:HMMPfam:PF00892 DUF6 FT InterPro:IPR000620 Protein of unknown function DUF6, FT transmembrane GO:Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:ScanRegExp:PS00041 FT HTH_ARAC_FAMILY_1 InterPro:IPR000005 Helix-turn-helix, AraC FT type GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /protein_id="ACS32718.1" FT /translation="MDRETEGTLLALIVLILLGLEPVVIKANPVNPFAFASLSALIASL FT ILWPVILLSGRAREIREKPAELRRAFLTGLFATAIAYSLFSYGTRLSTAINSAILTRFE FT VFYSFLISWLLLRERITGRAVASALALIAGVFLVVAQGKRLEILRGDVLLLLTPLFWQL FT GHAIAKRTDYNPLTIATLRNTFGGLLLLIPAVATGFAFTKLALAEGLIIALTQSLWYLA FT IARINLSKATAILTPAPALTALVSIALLGERVTLYHLAGLALITLGTLAISREEGGVRE FT " FT gene 207345..208112 FT /locus_tag="TGAM_0217" FT /note="tg0217" FT CDS 207345..208112 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0217" FT /product="Metallo-beta-lactamase superfamily protein" FT /note="Possibly related to Ribonuclease Z" FT /db_xref="GOA:C5A3A7" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:C5A3A7" FT /inference="protein motif:CDD:ElaC, Metal-dependent FT hydrolases of the beta-lactamase superfamily III [General FT function prediction only]" FT /inference="protein motif:CDD:Lactamase_B, FT Metallo-beta-lactamase superfamily" FT /inference="protein motif:CDD:PhnP, Metal-dependent FT hydrolases of the beta-lactamase superfamily I [General FT function prediction only]" FT /inference="protein motif:CDD:YSH1, Predicted exonuclease FT of the beta-lactamase fold involved in RNA processing FT [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:COG:COG1235 Metal-dependent FT hydrolases of the beta-lactamase superfamily I; R General FT function prediction only" FT /inference="protein motif:Gene3D:G3D.3.60.15.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR12553 FT ELAC-RELATED" FT /inference="protein motif:HMMPanther:PTHR12553:SF5 ELAC" FT /inference="protein motif:HMMPfam:PF00753 Lactamase_B FT InterPro:IPR001279 Beta-lactamase-like" FT /inference="protein motif:superfamily:SSF56281 FT Metallo-hydrolase/oxidoreductase" FT /protein_id="ACS32719.1" FT /translation="MKVVILGSGSYSGTPKPLCTCENCSRARINPALRRTRFSLYFDKT FT LVDPSPDLHYHLERLNKRVERVLITHGHFDHIFGLPELQVFKRLKFYSHREALEVAKSL FT ARLAFGSESPEGHEWSYNKLEFWEETRVGKMKVVHFPVTHTVTAGGFVIEVGGKRIAIT FT GDTGPEILKDERAIKLMEGADLLIAEMTHREAIPGSHLGVREAIELAKRVGAGYTVFAH FT ISHSNYPHEVLEKRVREAGIPGEVARDFTWVEV" FT repeat_region complement(208439..208937) FT /rpt_type=TANDEM FT /note="CRISPR repeat cluster" FT repeat_region complement(208439..208467) FT /note="tg_rep1_a; repeat element in cluster A" FT repeat_region complement(208503..208532) FT /note="tg_rep2_a; repeat element in cluster A" FT repeat_region complement(208570..208598) FT /note="tg_rep3_a; repeat element in cluster A" FT repeat_region complement(208637..208666) FT /note="tg_rep4_a; repeat element in cluster A" FT repeat_region complement(208705..208734) FT /note="tg_rep5_a; repeat element in cluster A" FT repeat_region complement(208773..208802) FT /note="tg_rep6_a; repeat element in cluster A" FT repeat_region complement(208842..208871) FT /note="tg_rep7_a; repeat element in cluster A" FT repeat_region complement(208908..208937) FT /note="tg_rep8_a; repeat element in cluster A" FT gene complement(209418..210821) FT /gene="acdA-1" FT /locus_tag="TGAM_0218" FT /note="tg0218" FT CDS complement(209418..210821) FT /codon_start=1 FT /transl_table=11 FT /gene="acdA-1" FT /locus_tag="TGAM_0218" FT /product="Acetyl-CoA synthetase (ADP forming), alpha chain FT (acdA)" FT /EC_number="6.2.1.13" FT /db_xref="GOA:C5A3A8" FT /db_xref="InterPro:IPR003781" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR016102" FT /db_xref="UniProtKB/TrEMBL:C5A3A8" FT /inference="protein motif:CDD:CoA_binding, CoA binding FT domain" FT /inference="protein motif:CDD:COG1042, Acyl-CoA synthetase FT (NDP forming) [Energy production and conversion]" FT /inference="protein motif:CDD:COG1832, Predicted FT CoA-binding protein [General function prediction only]" FT /inference="protein motif:CDD:SucD, Succinyl-CoA FT synthetase, alpha subunit [Energy production and FT conversion]" FT /inference="protein motif:COG:COG1042 Acyl-CoA synthetase FT (NDP forming); C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.261 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPanther:PTHR11117 SUCCINYL-COA FT SYNTHETASE-RELATED" FT /inference="protein motif:HMMPfam:PF02629 CoA_binding FT InterPro:IPR003781 CoA-binding" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /inference="protein motif:superfamily:SSF52210 Succinyl-CoA FT synthetase domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32720.1" FT /translation="MESLDFLFYPKSVAVIGASHVPGKVGNAIMRSITLRFEGKVYAVN FT VKGGEIEVNGKKFKVYRSIKEIPDEVDVAVIAVPAKFVPDVIDECGEKGVKGAIVISAG FT FKEAGRADLEEELLKRARKWGIRVVGPNCLGVTNLENGFDCNFNPPERQARPPFGKVAF FT MSQSGAFGAAILDWAAREKIGMSKFISLGNMADLDESDFMDYLGDDEKTGVITGYLEGV FT KDGRKFLETAKRVTLKKPVVILKSGRTEAGAKAAASHTGSLAGSYAIYRAAFEQSGVLE FT ATTMRQLFNYAKVLAMQKPAKGDRVAIVTNGGGAGVMMSDGLLERGLKMAELSEETLKK FT FEEDVRAGKLPAHMSYKNPIDVIGDAPSSRYEIAMRYALEDPNVDVLVVIALFQSPALD FT EGIIDAVERMKAYGKPIVFVAPGGDFPHKMARNIEQKGIPVYETTEDAVDAVYALVKYG FT EWLRENGKL" FT gene 211001..211585 FT /locus_tag="TGAM_0219" FT /note="tg0219" FT CDS 211001..211585 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0219" FT /product="Transcription regulator, arsR family" FT /db_xref="GOA:C5A3A9" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR009072" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A3A9" FT /inference="protein motif:CDD:HTH_ARSR, Arsenical FT Resistance Operon Repressor and similar prokaryotic, metal FT regulated homodimeric repressors" FT /inference="protein motif:CDD:HTH_ARSR, helix_turn_helix, FT Arsenical Resistance Operon Repressor" FT /inference="protein motif:COG:COG0640 Predicted FT transcriptional regulators; K Transcription" FT /inference="protein motif:FPrintScan:PR00778 HTHARSR FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMPfam:PF01022 HTH_5 FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:HMMSmart:SM00418 no description FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:ProfileScan:PS50987 HTH_ARSR_2 FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32721.1" FT /translation="MRAMAKVKVITDPDVIKLMLEDTRRKILSLLRNREMTISQLSEIL FT GKTPQTIYHHIEKLKEAGLVEVKRTEMKGNLIEKYYGRTADAFYINLYLGDEELRYFAR FT SRLKTKLEIFKALGYEFDDAELLNVMDELLKKEHQYKTEISREIEENEEKLKDFSNEDI FT IHAIEWLAMAKMGRDEEVLELLKKLGEILRK" FT gene 211596..211898 FT /locus_tag="TGAM_0220" FT /note="tg0220" FT CDS 211596..211898 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0220" FT /product="Conserved archaeal hypothetical protein" FT /note="Contains DUF211 domain" FT /db_xref="InterPro:IPR003831" FT /db_xref="InterPro:IPR023129" FT /db_xref="UniProtKB/TrEMBL:C5A3B0" FT /inference="protein motif:BlastProDom:PD012512 FT O59594_PYRHO_O59594; InterPro:IPR003831 Protein of unknown FT function DUF211" FT /inference="protein motif:CDD:COG1888, Uncharacterized FT protein conserved in archaea [Function unknown]" FT /inference="protein motif:CDD:DUF211, Uncharacterized ArCR, FT COG1888" FT /inference="protein motif:COG:COG1888 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF02680 DUF211 FT InterPro:IPR003831 Protein of unknown function DUF211" FT /inference="protein motif:superfamily:SSF54984 FT eEF-1beta-like" FT /protein_id="ACS32722.1" FT /translation="MGKGIRLLVLDVLKPHQPIVTELALGLSELEGVEGVNITLVEIDK FT ETENVKITVVGDDLDYEEIVQTIEEFGGVVHSIDMVAAGRRIVEEEETPQDKLEE" FT gene 211913..212470 FT /locus_tag="TGAM_0221" FT /note="tg0221" FT CDS 211913..212470 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0221" FT /product="Transcription regulator, arsR family" FT /db_xref="GOA:C5A3B1" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A3B1" FT /inference="protein motif:CDD:HTH_ARSR, Arsenical FT Resistance Operon Repressor and similar prokaryotic, metal FT regulated homodimeric repressors" FT /inference="protein motif:CDD:HTH_ARSR, helix_turn_helix, FT Arsenical Resistance Operon Repressor" FT /inference="protein motif:COG:COG0640 Predicted FT transcriptional regulators; K Transcription" FT /inference="protein motif:FPrintScan:PR00778 HTHARSR FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMPanther:PTHR10948 FT TRANSPOSASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10948:SF18 gb FT def:transposase for insertion sequence element is4351 FT (transposon tn4551)" FT /inference="protein motif:HMMPfam:PF01022 HTH_5 FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:HMMSmart:SM00418 no description FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /protein_id="ACS32723.1" FT /translation="MREVLIITEPSVVKILSEPTRFSILKLLRQRPMSVNELSDALGKD FT RTTIYRHVKVLEKAGLVEEIEEIGNEKVYSRTARMFLIKVGPDESIEEFRQAYLQVEAE FT KLVRLLEKAGFEIQDREKLKLLAKEVLDEIEIRSQPIIKRISEANVELTEVELFHLLNM FT LVFLQSCELCEKAKEARALLRF" FT gene 212587..214017 FT /gene="amyA-1" FT /locus_tag="TGAM_0222" FT /note="tg0222" FT CDS 212587..214017 FT /codon_start=1 FT /transl_table=11 FT /gene="amyA-1" FT /locus_tag="TGAM_0222" FT /product="Alpha-amylase (amyA)" FT /EC_number="3.2.1.1" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A3B2" FT /db_xref="InterPro:IPR006046" FT /db_xref="InterPro:IPR006047" FT /db_xref="InterPro:IPR013776" FT /db_xref="InterPro:IPR013780" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR015237" FT /db_xref="InterPro:IPR015902" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:C5A3B2" FT /inference="protein motif:CDD:Aamy, Alpha-amylase domain" FT /inference="protein motif:CDD:Alpha-amylase, Alpha amylase, FT catalytic domain" FT /inference="protein motif:COG:COG0366 Glycosidases; G FT Carbohydrate transport and metabolism" FT /inference="protein motif:FPrintScan:PR00110 ALPHAAMYLASE FT InterPro:IPR006046 Glycoside hydrolase family 13 FT GO:Molecular Function:alpha-amylase activity (GO:0004556), FT Biological Process:carbohydrate metabolism (GO:0005975)" FT /inference="protein motif:Gene3D:G3D.3.20.20.80 no FT description" FT /inference="protein motif:HMMPanther:PTHR10357 ALPHA FT AMYLASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10357:SF44 SOLUTE FT CARRIER FAMILY 3" FT /inference="protein motif:HMMPfam:PF00128 Alpha-amylase FT InterPro:IPR006047 Alpha amylase, catalytic region FT GO:Molecular Function:alpha-amylase activity (GO:0004556), FT Biological Process:carbohydrate metabolism (GO:0005975)" FT /inference="protein motif:HMMSmart:SM00642 no description FT InterPro:IPR006589 Alpha amylase, catalytic subdomain FT GO:Molecular Function:alpha-amylase activity (GO:0004556), FT Biological Process:carbohydrate metabolism (GO:0005975)" FT /inference="protein motif:superfamily:SSF51011 Glycosyl FT hydrolase domain" FT /inference="protein motif:superfamily:SSF51445 FT (Trans)glycosidases" FT /protein_id="ACS32724.1" FT /translation="MGVVPALSQGGMEMRRYTRVLILLMALFLLAGLYYPSASAAKYSE FT LEQGGVIMQAFYWDVPAGGIWWDTIRQKIPEWYDAGISAIWIPPASKGMGGAYSMGYDP FT YDYFDLGEFYQKGTVETRFGSKEELVNMISTAHRYGIKVIADIVINHRAGGDLEWNPYV FT GDYTWTDFSQVASGKYKAHYMDFHPNNYSTSDEGTFGGFPDIDHLVPFNKYWLWASDES FT YAAYLRSIGVDAWRFDYVKGYGAWVVKDWLSWWGGWAVGEYWDTDVNALLNWAYDSGAK FT VFDFPLYYKMDEAFDNKNIPALVYAIQNGGTVVSRDPFKAVTFVANHDTNIIWNKYPAY FT AFILTYEGQPVIFYRDYEEWLNKDKLNNLIWIHEHLAGGSTKILYYDDDELIFMREGYG FT DRPGLITYINLGSGWAERWVNVGSKFAGYTIHEYTGNLGGWVDRYVYYNGWVKLTAPPH FT DPANGYYGYSVWSYAGVG" FT gene 214190..215374 FT /locus_tag="TGAM_0223" FT /note="tg0223" FT CDS 214190..215374 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0223" FT /product="Hypothetical protein" FT /note="9 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3B3" FT /protein_id="ACS32725.1" FT /translation="MNKQLVFIFTLLSFLILSTPAVKADKVMASMHCIPTSIEPGGAVI FT CDIDFKLLNPNETATLKLKKVYLEDKEIWPRGPSRGTVIVPNSKFHLGPHDIEGSIAIT FT LTFNNEMADCYFGKPVLDDYRDKFGGRTYKITAVVDGISTPVSAQIKIKNTGLWDSFIW FT VLEYLIVLIYLISIAVSLSTKNFPIGSLLLVVFSGFVGVSIARIASGLQWNLKYGYWSP FT DIPSIVFLISIVLISALDYKEDKKSWKLILSGLLWLLMVTAAKYGSNGDVLAIVLSLTL FT WVTVELVGITGKRVKAYKRELSSVVVAPYLIPISYHLMLSVSSFVFWVSSFFIFLVAIL FT FVNVLYHSNYSSKRYIVLMSPALVLLFMTTNSPYFLAYALPLLGITFLYERWDN" FT gene complement(215375..216826) FT /locus_tag="TGAM_0224" FT /note="tg0224" FT CDS complement(215375..216826) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0224" FT /product="Carbohydrate kinase, putative" FT /db_xref="GOA:C5A3B4" FT /db_xref="InterPro:IPR000631" FT /db_xref="InterPro:IPR004443" FT /db_xref="InterPro:IPR017953" FT /db_xref="UniProtKB/TrEMBL:C5A3B4" FT /inference="protein motif:CDD:Carb_kinase, Carbohydrate FT kinase" FT /inference="protein motif:CDD:COG0062, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:COG0063, Predicted sugar FT kinase [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:YjeF_N, YjeF-related protein FT N-terminus" FT /inference="protein motif:CDD:YXKO-related, B" FT /inference="protein motif:COG:COG0063 Predicted sugar FT kinase; G Carbohydrate transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.1190.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR12592 FT UNCHARACTERIZED" FT /inference="protein motif:HMMPanther:PTHR12592:SF5 FT UNCHARACTERIZED" FT /inference="protein motif:HMMPfam:PF01256 Carb_kinase FT InterPro:IPR000631 Carbohydrate kinase GO:Molecular FT Function:molecular function unknown (GO:0005554)" FT /inference="protein motif:HMMPfam:PF03853 YjeF_N FT InterPro:IPR004443 YjeF-related protein, N-terminal FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:HMMTigr:TIGR00196 yjeF_cterm:YjeF FT homolog, C-terminus InterPro:IPR000631 Carbohydrate kinase FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:HMMTigr:TIGR00197 yjeF_nterm:YjeF FT homolog, N-terminus InterPro:IPR004443 YjeF-related FT protein, N-terminal GO:Molecular Function:molecular FT function unknown (GO:0005554)" FT /inference="protein motif:ScanRegExp:PS01050 UPF0031_2 FT InterPro:IPR000631 Carbohydrate kinase GO:Molecular FT Function:molecular function unknown (GO:0005554)" FT /inference="protein motif:superfamily:SSF53613 FT Ribokinase-like" FT /inference="protein motif:superfamily:SSF64153 YjeF FT N-terminal domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32726.1" FT /translation="MVLMRIEDVYVWDLNAKWLGITPYQLMENAGAGVARVIEERFGRG FT LRIAVFSGTGNNGGDGFVAARHLSFENDVTVFLVGDEAKIRSEEARHNWEILKRLDFVE FT IKVLKDSAYIKELDLSGYDVIVDALLGAGTKGEPREPVRSAIEKINEYAGKAKLVSVDL FT PSGYPSNVRVKADFAVTFQWDKEEYKDFERVIVKIGYPRELHHLVGPGDAKFTLRKRGK FT HKGQNGKLLVVGGSSSYYGAPYLASKAASYLVDLVYLAMPAEPAKRISDPDLILRPFLG FT ENFSPEHINDLLGLAEKADAVVIGPGIGLAKETKEFVREFVKRCERPMVIDADGLKAVA FT EDLGVLEGKTFVLTPHAGEFNILFGVKPPEGLLERAELVREKALEIGGVILLKGSYDVI FT SDGKTWKYNRTGNTGMTTGGTGDVLAGLVGALLAFGNSPLRSASVGAFLNGLAGDIVKE FT EFGENFTALELAKRVPKAIKWVEEF" FT gene complement(216861..217412) FT /locus_tag="TGAM_0225" FT /note="tg0225" FT CDS complement(216861..217412) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0225" FT /product="Conserved hypothetical protein, Appr-1-p FT processing enzyme family" FT /db_xref="InterPro:IPR002589" FT /db_xref="UniProtKB/TrEMBL:C5A3B5" FT /inference="protein motif:CDD:A1pp, Appr-1'-p processing FT enzyme; Function determined by Martzen et al" FT /inference="protein motif:CDD:Macro, Macro domain, a FT high-affinity ADP-ribose binding module found in a variety FT of proteins as a stand-alone domain or in combination with FT other domains like in histone macroH2A and some PARPs (poly FT ADP-ribose polymerases)" FT /inference="protein motif:CDD:Macro_1, Macro domain, FT Unknown family 1" FT /inference="protein motif:CDD:Macro_2, Macro domain, FT Unknown family 2" FT /inference="protein motif:CDD:Macro_Af1521_BAL_like, Macro FT domain, Af1521- and BAL-like family" FT /inference="protein motif:CDD:Macro_Appr_pase_like, Macro FT domain, Appr-1'-pase_like family" FT /inference="protein motif:CDD:Macro_BAL_like, Macro domain, FT BAL_like family" FT /inference="protein motif:COG:COG2110 Predicted phosphatase FT homologous to the C-terminal domain of histone macroH2A1; R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.20.20.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR11106 FT UNCHARACTERIZED" FT /inference="protein motif:HMMPanther:PTHR11106:SF3 FT UNCHARACTERIZED" FT /inference="protein motif:HMMPfam:PF01661 A1pp FT InterPro:IPR002589 Appr-1-p processing" FT /inference="protein motif:HMMSmart:SM00506 no description FT InterPro:IPR002589 Appr-1-p processing" FT /inference="protein motif:superfamily:SSF52949 Macro FT domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32727.1" FT /translation="MTMEFEVVKGDITRFQADAIVNAANKYLEHGGGVAYAIAKAAAGN FT VAEYIRISKEAMKKQLGKDHIEHGEVVVTPAMRLERHGIRHVIHTVGPYCGGTWDEDRK FT DKLRKAILGALRKADELGVKSIAFPAISAGIYGCPLEEVVKTFRETVEEFSKEAKSVEK FT VYLVLYSEESYRKALEVLNG" FT gene 217528..218193 FT /gene="tfe" FT /locus_tag="TGAM_0226" FT /note="tg0226" FT CDS 217528..218193 FT /codon_start=1 FT /transl_table=11 FT /gene="tfe" FT /locus_tag="TGAM_0226" FT /product="Transcription factor TFIIE subunit alpha-like FT protein (tfe)" FT /db_xref="GOA:C5A3B6" FT /db_xref="InterPro:IPR002853" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013137" FT /db_xref="InterPro:IPR016481" FT /db_xref="InterPro:IPR017919" FT /db_xref="InterPro:IPR024550" FT /db_xref="UniProtKB/TrEMBL:C5A3B6" FT /inference="protein motif:CDD:TFA1, Transcription FT initiation factor IIE, alpha subunit [Transcription]" FT /inference="protein motif:CDD:TFIIE, Transcription FT initiation factor IIE" FT /inference="protein motif:CDD:TFIIE_alpha, TFIIE alpha FT subunit" FT /inference="protein motif:COG:COG1675 Transcription FT initiation factor IIE, alpha subunit; K Transcription" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMPfam:PF02002 TFIIE_alpha FT InterPro:IPR002853 Transcription factor TFIIE, alpha FT subunit GO:Molecular Function:RNA polymerase II FT transcription factor activity (GO:0003702), Cellular FT Component:transcription factor TFIIE complex (GO:0005673), FT Biological Process:transcription initiation from RNA FT polymerase II promoter (GO:0006367)" FT /inference="protein motif:HMMSmart:SM00531 no description FT InterPro:IPR002853 Transcription factor TFIIE, alpha FT subunit GO:Molecular Function:RNA polymerase II FT transcription factor activity (GO:0003702), Cellular FT Component:transcription factor TFIIE complex (GO:0005673), FT Biological Process:transcription initiation from RNA FT polymerase II promoter (GO:0006367)" FT /inference="protein motif:HMMTigr:TIGR00373 FT TIGR00373:conserved hypothetical protein T FT InterPro:IPR005241 TFllE alpha-related protein" FT /inference="protein motif:superfamily:SSF46579 Prefoldin FT InterPro:IPR009053 Prefoldin" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32728.1" FT /translation="MRPHRAPKIRAEVVIVARKKRLDKDLIDLAMEIGGEEAVEIVKAL FT AERKDATDEELAESTGIRINTVRKVLYTLYDMGLADFKRIRDKETGWYYYYWNLDLRRL FT PDIIRARKMEELKKLRKMLEEESGEIYYWCGNPGHPRLTFDEAMEYEFQCPICGEILMQ FT YDNSEIIEDLKRRIEELELELGLKKSKKAKKSSRKSGKSSRSKSKKSSKTTSKAEVVA" FT gene 218237..218965 FT /locus_tag="TGAM_0227" FT /note="tg0227" FT CDS 218237..218965 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0227" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR016757" FT /db_xref="UniProtKB/TrEMBL:C5A3B7" FT /inference="protein motif:CDD:COG4044, Uncharacterized FT protein conserved in archaea [Function unknown]" FT /inference="protein motif:COG:COG4044 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32729.1" FT /translation="MEEVVILEKVYGDRSGFDKLHRKLHSLLGDLEVEWKLSATTKNWV FT KVSLRGEDEEISANLVREEFGEVPYSLKNVEVGKTYRGRFIDLGKVGYGVYVDIGIFKP FT KPKDALIPLYYLKKTFGDKPVRQMIREFGWIDNLPVEVEVTNVEFGAREVELAFTEKQL FT KTIEHWLSDGYDKLFITGTISERVEEALIKTGHGRDVRRMEELGLMETLLVLKRGTQAP FT GIIKAIGPHLKGAVFGAIKF" FT gene complement(218955..220016) FT /locus_tag="TGAM_0228" FT /note="tg0228" FT CDS complement(218955..220016) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0228" FT /product="Conserved hypothetical protein" FT /note="9 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3B8" FT /protein_id="ACS32730.1" FT /translation="MRKSTEAALIVILIGLVTALLLMNPVSAEGTFHMRSQGVTFSPIR FT LALFLGAALTTVVLVTLHLEGSGEYAHIFYLLSVSTITIWIVNSGVPDMSSFLAVIRDL FT YNRIGIQRSIPVETAFYLYLFLLLILVTALHYSAPRRSRELGFLIFGMLFSAPFFRSIV FT YPPKPEFIGITAFVLSISVMTSLVFSPRVLKSLLQTIALAMFTVVAIAIEPWNAVLPLA FT FIMMFPRRRRNIIYVTLVLFGIGIIISRGLIWTGSRESFEWKTVALQLLLPIMLVLYAL FT LFKTRTIVTTLRNSKGPTPFLTFLLLIFLTGSISSTRLLPYAAVTLTVLSVRFVFHSRD FT TGKVIPKREPAKT" FT gene complement(220156..221055) FT /locus_tag="TGAM_0229" FT /note="tg0229" FT CDS complement(220156..221055) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0229" FT /product="PP-loop ATPase, mrp-like protein" FT /db_xref="GOA:C5A3B9" FT /db_xref="InterPro:IPR000808" FT /db_xref="InterPro:IPR015223" FT /db_xref="InterPro:IPR019591" FT /db_xref="UniProtKB/TrEMBL:C5A3B9" FT /inference="protein motif:CDD:ArsA, ArsA ATPase functionas FT as an efflux pump located on the inner membrane of the FT cell" FT /inference="protein motif:CDD:COG0455, ATPases involved in FT chromosome partitioning [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:COG1149, MinD superfamily FT P-loop ATPase containing an inserted ferredoxin domain FT [Energy production and conversion]" FT /inference="protein motif:CDD:CooC, CO dehydrogenase FT maturation factor [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:Fer4_NifH_child, This protein FT family's function is unkown" FT /inference="protein motif:CDD:FleN-like, FleN is a member FT of the Fer4_NifH superfamily" FT /inference="protein motif:CDD:MinD, Bacterial cell division FT requires the formation of a septum at mid-cell" FT /inference="protein motif:CDD:MinD, Septum formation FT inhibitor-activating ATPase [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:Mrp, ATPases involved in FT chromosome partitioning [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:MRP-like, MRP (Multiple FT Resistance and pH adaptation) is a homologue of the FT Fer4_NifH superfamily" FT /inference="protein motif:CDD:Soj, ATPases involved in FT chromosome partitioning [Cell division and chromosome FT partitioning]" FT /inference="protein motif:COG:COG0489 ATPases involved in FT chromosome partitioning; D Cell cycle control, cell FT division, chromosome partitioning" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR13696 CELL FT DIVISION INHIBITOR MIND-1" FT /inference="protein motif:HMMPanther:PTHR13696:SF4 FT NUCLEOTIDE-BINDING PROTEIN" FT /inference="protein motif:ScanRegExp:PS01215 MRP FT InterPro:IPR000808 Mrp GO:Molecular Function:ATP binding FT (GO:0005524), Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32731.1" FT /translation="MTIKTPTLNVGGLGADPLTERIKEKQKKWKYKIAVLSGKGGVGKS FT TVAVNLAAALAKKGYHVGLLDADIHGPNVAKMLGVEKADVLAERMEDGRFEMLPPMNDF FT LGQITPIKVMSMGFLVGEDQPVIWRGPLVTKAIKQLLGDVKWGELDFMIIDFPPGTGDE FT ILTVVQNVQLDAAVIVTTPQEVALLDTGKAVNMMKKMEVPYIAVIENMSYLICPHCGNE FT IDLFGKGGGKKLAEKEGVDFLGEVPIDLKAREASDAGIPIVLYGDTPAAKAFMEIAEKL FT VKKLEELKGESEEQEKTE" FT gene complement(221139..223079) FT /gene="acsA" FT /locus_tag="TGAM_0230" FT /note="tg0230" FT CDS complement(221139..223079) FT /codon_start=1 FT /transl_table=11 FT /gene="acsA" FT /locus_tag="TGAM_0230" FT /product="Acetyl-coenzyme A synthetase (acsA)" FT /EC_number="6.2.1.1" FT /db_xref="GOA:C5A3C0" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR011904" FT /db_xref="InterPro:IPR020845" FT /db_xref="InterPro:IPR024597" FT /db_xref="UniProtKB/TrEMBL:C5A3C0" FT /inference="protein motif:COG:COG0365 Acyl-coenzyme A FT synthetases/AMP-(fatty) acid ligases; I Lipid transport and FT metabolism" FT /inference="protein motif:FPrintScan:PR00154 AMPBINDING FT InterPro:IPR000873 AMP-dependent synthetase and ligase FT GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:Gene3D:G3D.2.30.38.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.30.300.30 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.980 no FT description" FT /inference="protein motif:HMMPanther:PTHR11968 FT ATP-DEPENDENT AMP-BINDING ENZYME FAMILY-RELATED" FT /inference="protein motif:HMMPanther:PTHR11968:SF54 FT ACETYL-COA SYNTHETASE" FT /inference="protein motif:HMMPfam:PF00501 AMP-binding FT InterPro:IPR000873 AMP-dependent synthetase and ligase FT GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:HMMTigr:TIGR02188 FT Ac_CoA_lig_AcsA:acetate--CoA ligase InterPro:IPR011904 FT Acetate--CoA ligase GO:Molecular Function:acetate-CoA FT ligase activity (GO:0003987), Molecular Function:AMP FT binding (GO:0016208)" FT /inference="protein motif:ScanRegExp:PS00455 AMP_BINDING FT InterPro:IPR000873 AMP-dependent synthetase and ligase FT GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:superfamily:SSF56801 Acetyl-CoA FT synthetase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32732.1" FT /translation="MQIGEGFLKERYLPLRAFREEHRKSIENIEEFWAEQAKVLDWFKT FT WDRVLDDSKAPFFRWFVGGQLNASYNALDRHVKAGKRNRAAIIWESERGETRTLTYYEL FT YREVNRFASALKNLGVGKGDRVVIYMPLVPEVVIAMLASARIGAIHSVVFSGFSAEALA FT TRINDARAKVVITADYLYRRGKKLNLKEIVDRALLETPSVESVVVLRREENGVNMVEGR FT DYDWHNLLEGADKYVEPVPVESNHPLFILYTSGTTGKPKGIVHSTGGYLVYVAKTMQWA FT WGITESDLFWNTADVGWITGHSYLVYGPLTLGLTVMMYEGALNYPKPDRPWELIEKHGV FT TIFYTAPTAIRMLMRYGDEWVKKHDLSSLRLLGSVGEPINPRAWKWYYEVVGGGRCPII FT DTWWQTETGGYMIYPSAGLQLPPLKPGSATFPGLGVDADVLRADGSPAEPNERGYLVIK FT KPWPGMLLGIWGDDERYIRTYWQRFSKPDEGIWIYYPADYAMKDDEGYFWIFGRADEVL FT NVSGHRIGTAEIEHALVLHPAVAEAAVIGRPDEIKGEVPVAFVILKENVVPSEGLKKEL FT IDYVRETLGPIAAPAEVFFVNKLPKTRSGKIMRRVLKALASGKGLGDLSTLEDEASVEE FT VKKALEGFEMR" FT gene complement(223357..224085) FT /gene="cooC-1" FT /locus_tag="TGAM_0231" FT /note="tg0231" FT CDS complement(223357..224085) FT /codon_start=1 FT /transl_table=11 FT /gene="cooC-1" FT /locus_tag="TGAM_0231" FT /product="CODH nickel-insertion accessory protein, CO FT dehydrogenase maturation factor (cooC)" FT /db_xref="InterPro:IPR002586" FT /db_xref="InterPro:IPR014433" FT /db_xref="UniProtKB/TrEMBL:C5A3C1" FT /inference="protein motif:BlastProDom:PD000819 FT SR54_PYRAE_Q8ZT95; InterPro:IPR000897 GTP-binding signal FT recognition particle SRP54, G-domain" FT /inference="protein motif:CDD:COG1149, MinD superfamily FT P-loop ATPase containing an inserted ferredoxin domain FT [Energy production and conversion]" FT /inference="protein motif:CDD:CooC, CO dehydrogenase FT maturation factor [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:CooC, The accessory protein FT CooC, which contains a nucleotide-binding domain (P-loop) FT near the N-terminus, participates in the maturation of the FT nickel center of carbon monoxide dehydrogenase (CODH)" FT /inference="protein motif:CDD:MinD, Septum formation FT inhibitor-activating ATPase [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:Mrp, ATPases involved in FT chromosome partitioning [Cell division and chromosome FT partitioning]" FT /inference="protein motif:COG:COG3640 CO dehydrogenase FT maturation factor; D Cell cycle control, cell division, FT chromosome partitioning" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR13696 CELL FT DIVISION INHIBITOR MIND-1" FT /inference="protein motif:HMMPanther:PTHR13696:SF2 CELL FT DIVISION INHIBITOR MIND-1" FT /inference="protein motif:HMMPfam:PF01656 CbiA FT InterPro:IPR002586 Cobyrinic acid a,c-diamide synthase" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32733.1" FT /translation="MKVLVSGKGGCGKSTISAMLGKYLAERGYHVLIIDADESNPGLYR FT MLGLPKVKTLAEHLGGKKRAKILMAAEGQGELDEELFDWTLDDIPAEILARKGNLAVLT FT IGKIEEAEEGCACPYGFLVRKLLEGIKLKDNEIIIVDTEAGIEHFGRGVDRYVDVVIDV FT AEPSAESIELSKKIKALSEGLGLKHVLVLNKALPGVEEDLPVKPDVVIPFDQNFILNSL FT KGREVEPIAQIEELWRIING" FT gene complement(224154..224570) FT /gene="nikR" FT /locus_tag="TGAM_0232" FT /note="tg0232" FT CDS complement(224154..224570) FT /codon_start=1 FT /transl_table=11 FT /gene="nikR" FT /locus_tag="TGAM_0232" FT /product="Transcription nickel responsive regulator (nikR)" FT /db_xref="GOA:C5A3C2" FT /db_xref="InterPro:IPR002145" FT /db_xref="InterPro:IPR010985" FT /db_xref="InterPro:IPR013321" FT /db_xref="InterPro:IPR014864" FT /db_xref="InterPro:IPR022988" FT /db_xref="UniProtKB/Swiss-Prot:C5A3C2" FT /inference="protein motif:CDD:NikR, Predicted FT transcriptional regulators containing the CopG/Arc/MetJ FT DNA-binding domain and a metal-binding domain FT [Transcription]" FT /inference="protein motif:COG:COG0864 Predicted FT transcriptional regulators containing the CopG/Arc/MetJ FT DNA-binding domain and a metal-binding domain; K FT Transcription" FT /inference="protein motif:HMMPfam:PF01402 RHH_1 FT InterPro:IPR002145 CopG-like DNA-binding GO:Molecular FT Function:DNA binding (GO:0003677), Biological FT Process:regulation of transcription, DNA-dependent FT (GO:0006355)" FT /inference="protein motif:superfamily:SSF47598 Met FT repressor-like InterPro:IPR010985 Ribbon-helix-helix" FT /protein_id="ACS32734.1" FT /translation="MGVVRFGVSIPEELLEKFDRIIEEKGYVNRSEAIRDLIRDFIVRH FT EWEVGDAEVAGTITMLYNHDEADVVKELLDLQHDYLDEIVSSIHVHMDEHNCLEVVIVK FT GKAKRIKEIADRLLSLKGVKHGKLVMTGTGRELV" FT gene 224644..225063 FT /gene="hypA" FT /locus_tag="TGAM_0233" FT /note="tg0233" FT CDS 224644..225063 FT /codon_start=1 FT /transl_table=11 FT /gene="hypA" FT /locus_tag="TGAM_0233" FT /product="[NiFe] hydrogenase maturation protein (hypA)" FT /db_xref="GOA:C5A3C3" FT /db_xref="InterPro:IPR000688" FT /db_xref="InterPro:IPR020538" FT /db_xref="UniProtKB/Swiss-Prot:C5A3C3" FT /inference="protein motif:BlastProDom:PD003620 FT HYPA_PYRFU_Q8U357; InterPro:IPR000688 Hydrogenase FT expression/synthesis, HypA GO:Biological Process:protein FT modification (GO:0006464), Molecular Function:nickel ion FT binding (GO:0016151)" FT /inference="protein motif:CDD:HypA, Hydrogenase FT expression/synthesis hypA family" FT /inference="protein motif:COG:COG0375 Zn finger protein FT HypA/HybF (possibly regulating hydrogenase expression); R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.2.20.28.10 no FT description" FT /inference="protein motif:HMMPfam:PF01155 HypA FT InterPro:IPR000688 Hydrogenase expression/synthesis, HypA FT GO:Biological Process:protein modification (GO:0006464), FT Molecular Function:nickel ion binding (GO:0016151)" FT /inference="protein motif:HMMPIR:PIRSF004761 FT [NiFe]-hydrogenase maturation factor, HypA/HybF type FT InterPro:IPR000688 Hydrogenase expression/synthesis, HypA FT GO:Biological Process:protein modification (GO:0006464), FT Molecular Function:nickel ion binding (GO:0016151)" FT /inference="protein motif:ScanRegExp:PS01249 HYPA FT InterPro:IPR000688 Hydrogenase expression/synthesis, HypA FT GO:Biological Process:protein modification (GO:0006464), FT Molecular Function:nickel ion binding (GO:0016151)" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32735.1" FT /translation="MHEWALADAIVRTVLDYAQREGAKRVKAVRVVLGELQDVAEDIVK FT FAMEQMFAGTIAEGAEIIFEEEEAVFKCRNCGHTWKLKEVKDRFDERIKEDIHFIPEVV FT HAFLACPKCGSHDFEVVQGRGVYVAGIMIEKEGEA" FT gene 225060..225785 FT /locus_tag="TGAM_0234" FT /note="tg0234" FT CDS 225060..225785 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0234" FT /product="PP-loop ATPase, mrp-like protein" FT /db_xref="InterPro:IPR002586" FT /db_xref="UniProtKB/TrEMBL:C5A3C4" FT /inference="protein motif:CDD:ArsA, ArsA ATPase functionas FT as an efflux pump located on the inner membrane of the FT cell" FT /inference="protein motif:CDD:COG0455, ATPases involved in FT chromosome partitioning [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:COG1149, MinD superfamily FT P-loop ATPase containing an inserted ferredoxin domain FT [Energy production and conversion]" FT /inference="protein motif:CDD:Fer4_NifH_child, This protein FT family's function is unkown" FT /inference="protein motif:CDD:FleN-like, FleN is a member FT of the Fer4_NifH superfamily" FT /inference="protein motif:CDD:MinD, Bacterial cell division FT requires the formation of a septum at mid-cell" FT /inference="protein motif:CDD:Mrp, ATPases involved in FT chromosome partitioning [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:MRP-like, MRP (Multiple FT Resistance and pH adaptation) is a homologue of the FT Fer4_NifH superfamily" FT /inference="protein motif:CDD:Soj, ATPases involved in FT chromosome partitioning [Cell division and chromosome FT partitioning]" FT /inference="protein motif:COG:COG0489 ATPases involved in FT chromosome partitioning; D Cell cycle control, cell FT division, chromosome partitioning" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR13696 CELL FT DIVISION INHIBITOR MIND-1" FT /inference="protein motif:HMMPanther:PTHR13696:SF4 FT NUCLEOTIDE-BINDING PROTEIN" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32736.1" FT /translation="MIDPREIAINARLEKVKRIIPVVSGKGGVGKSLVSTTLALALAEK FT GHRVGLLDLDFHGASDHVILGFEPKEFPEEDRGVVPPTVHGIKFMTIAYYTEDRPTPLR FT GKEISDALIELLTITRWDELDYLVIDMPPGLGDQLLDVLRFLKRGEFLVVATPSKLALN FT VVEKLIQLLLEENHKVLGVVENMKLDEEEDVKKLAERHNVPYLVGIPFYPELDAKVGNV FT EELMKTEFAEKIRELAEKL" FT gene 225877..226797 FT /locus_tag="TGAM_0235" FT /note="tg0235" FT CDS 225877..226797 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0235" FT /product="Conserved hypothetical protein" FT /note="Similar to AF0692; 9 probable transmembrane helices FT predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3C5" FT /protein_id="ACS32737.1" FT /translation="MRRETRTLLLLTFLSPFLAEVLGGSTHPLQLVVQPLSFPFLWLFY FT GSGVLLIREAWVRFGGGQAGLMLLGALYGVVEEGVIIRSWFDPDWPDLGALRDYGRVFG FT VNASWAVLLTIYHTTMSIAIPILVVELLYPELRGKSLIGKRGVLLTTLAFCASAFAFAH FT LTSYVPSPAQYSVALFSALALLLLARKFGSIDVPFTPAHPFILGFLSGAMIFTSLAFLP FT KALPPLATSTVGTLALVLFFASLNGDEKRAVLGFLAFWLIIYDILLELVGVIGEAILGP FT LSYVFLFRRLGAVDRASTDQHQAER" FT gene 227009..227482 FT /gene="hybD" FT /gene_synonym="hoxM" FT /gene_synonym="hycI" FT /locus_tag="TGAM_0236" FT /note="tg0236" FT CDS 227009..227482 FT /codon_start=1 FT /transl_table=11 FT /gene="hybD" FT /gene_synonym="hoxM" FT /gene_synonym="hycI" FT /locus_tag="TGAM_0236" FT /product="[NiFe]-hydrogenase maturation protease FT (HybD/HycI/HoxM)" FT /db_xref="GOA:C5A3C6" FT /db_xref="InterPro:IPR000671" FT /db_xref="InterPro:IPR023430" FT /db_xref="UniProtKB/TrEMBL:C5A3C6" FT /inference="protein motif:CDD:HyaD, Ni,Fe-hydrogenase FT maturation factor [Energy production and conversion]" FT /inference="protein motif:CDD:HycI, Hydrogenase maturation FT protease" FT /inference="protein motif:COG:COG0680 Ni,Fe-hydrogenase FT maturation factor; C Energy production and conversion" FT /inference="protein motif:FPrintScan:PR00446 HYDRGNUPTAKE FT InterPro:IPR000671 Peptidase M52, hydrogen uptake protein FT GO:Molecular Function:ferredoxin hydrogenase activity FT (GO:0008901), Cellular Component:ferredoxin hydrogenase FT complex (GO:0009375)" FT /inference="protein motif:Gene3D:G3D.3.40.50.1450 no FT description" FT /inference="protein motif:HMMPfam:PF01750 HycI FT InterPro:IPR000671 Peptidase M52, hydrogen uptake protein FT GO:Molecular Function:ferredoxin hydrogenase activity FT (GO:0008901), Cellular Component:ferredoxin hydrogenase FT complex (GO:0009375)" FT /inference="protein motif:HMMPIR:PIRSF005756 FT [NiFe]-hydrogenase maturation protease InterPro:IPR000671 FT Peptidase M52, hydrogen uptake protein GO:Molecular FT Function:ferredoxin hydrogenase activity (GO:0008901), FT Cellular Component:ferredoxin hydrogenase complex FT (GO:0009375)" FT /inference="protein motif:HMMTigr:TIGR00072 FT hydrog_prot:hydrogenase maturation prote InterPro:IPR000671 FT Peptidase M52, hydrogen uptake protein GO:Molecular FT Function:ferredoxin hydrogenase activity (GO:0008901), FT Cellular Component:ferredoxin hydrogenase complex FT (GO:0009375)" FT /inference="protein motif:superfamily:SSF53163 HybD-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32738.1" FT /translation="MNLEELFQNAKRVVICGIGNDIRGDDAFGVLVAERLKELLDNPDV FT LVLNCGEVPENYTGKIANFKPDLVVFVDAVDFGGEVGEYITADPEGTLGEAISTHGLPL FT KFVTQFMKTMVKAEFVLIGCQPGSTGLFQEPSELIKKRAERLAELLAGILKRE" FT gene complement(227559..227834) FT /locus_tag="TGAM_0237" FT /note="tg0237" FT CDS complement(227559..227834) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0237" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3C7" FT /protein_id="ACS32739.1" FT /translation="MLSSSTSCSKRKLTGGRSMTMRGGSVLKFRSKRDLEERLAFIRLY FT VKRLKENPDEVFKQQVRLVNSFLASAKSFPLSREEYLKMKGELRRQ" FT gene complement(227740..228321) FT /locus_tag="TGAM_0238" FT /note="tg0238" FT CDS complement(227740..228321) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0238" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3C8" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32740.1" FT /translation="MDIEITEKKIVLNRELSELDKFVFDVIDVLERHVRYVIVSGYVTI FT LFGRSRGTEDVDVVIEPLPQEEFISMCEDAQKAGFEFLNPEACEGLYEMLAGRLGIRMV FT RKGEIIPNAEIKFPKDAFHREALEKRIPVWFNGRVIYISPIELQIAYKLYLGTDKDLED FT AFFLYELFKEKIDWRALNDYAGRLGVEVPF" FT gene complement(228355..228930) FT /gene="mobA" FT /locus_tag="TGAM_0239" FT /note="tg0239" FT CDS complement(228355..228930) FT /codon_start=1 FT /transl_table=11 FT /gene="mobA" FT /locus_tag="TGAM_0239" FT /product="Molybdopterin-guanine dinucleotide biosynthesis FT protein A (mobA)" FT /db_xref="GOA:C5A3C9" FT /db_xref="InterPro:IPR013482" FT /db_xref="UniProtKB/Swiss-Prot:C5A3C9" FT /inference="protein motif:CDD:COG2068, Uncharacterized FT MobA-related protein [General function prediction only]" FT /inference="protein motif:CDD:COG2266, FT GTP:adenosylcobinamide-phosphate guanylyltransferase FT [Coenzyme metabolism]" FT /inference="protein motif:CDD:MobA, Molybdopterin-guanine FT dinucleotide biosynthesis protein A [Coenzyme metabolism]" FT /inference="protein motif:COG:COG0746 Molybdopterin-guanine FT dinucleotide biosynthesis protein A; H Coenzyme transport FT and metabolism" FT /inference="protein motif:Gene3D:G3D.3.90.550.10 no FT description" FT /inference="protein motif:superfamily:SSF53448 FT Nucleotide-diphospho-sugar transferases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32741.1" FT /translation="MIGAVLAGGRGKRFGGDKLLYRINGKPLILYTIERLETAKKIDEI FT ILVASKDNAEKLEKLGYRVVVDNLLIGPMGGVYTALSLGDAFVVAGDMPLLVPEFVDFI FT ISEFKKSGKTACVPRWENGYLEPLHAAYSSAFREVLEEKIKAGNYALNRAIREVNPCYL FT PIESLPEEWRESFFNVNTREDLGKLHKG" FT gene complement(228927..229373) FT /locus_tag="TGAM_0240" FT /note="tg0240" FT CDS complement(228927..229373) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0240" FT /product="Nucleotidyltransferase, putative" FT /db_xref="GOA:C5A3D0" FT /db_xref="UniProtKB/TrEMBL:C5A3D0" FT /inference="protein motif:COG:COG1708 Predicted FT nucleotidyltransferases; R General function prediction FT only" FT /inference="protein motif:Gene3D:G3D.3.30.460.10 no FT description" FT /inference="protein motif:superfamily:SSF81301 FT Nucleotidyltransferase" FT /protein_id="ACS32742.1" FT /translation="MNEAKLKMAKEELIKRVKEFYGDNLLSIVFYGRHLRDPDFPEIDV FT VVVIDKPYDPVKMNRMADFVENIRDPIEEKYGYHVSFELYTREEAENFHSGYLDVVVNY FT EVAYDKDNYFQNLMNDMLNPKKAMDYVKYISTIEYIQVDEERKE" FT gene complement(229413..229739) FT /gene="mhy2I-2" FT /locus_tag="TGAM_0241" FT /note="tg0241" FT CDS complement(229413..229739) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy2I-2" FT /locus_tag="TGAM_0241" FT /product="putative formate hydrogenlyase I subunit I FT (Mhy2I)" FT /db_xref="GOA:C5A3D1" FT /db_xref="UniProtKB/TrEMBL:C5A3D1" FT /protein_id="ACS32743.1" FT /translation="MSEMPWKLYRFKYEDYPEYSARITGHYAGDLLIIEEEGELSEEAV FT KLIKSALGIDENTRAFDIEVRDVLRLPIKELPEKDRKVLLEAAEKLDSESKLHIEYRYQ FT PTFD" FT gene complement(229732..230565) FT /gene="mhy1H" FT /locus_tag="TGAM_0242" FT /note="tg0242" FT CDS complement(229732..230565) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy1H" FT /locus_tag="TGAM_0242" FT /product="formate hydrogenlyase I subunit H (Mhy1H)" FT /EC_number="1.6.5.3" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A3D2" FT /db_xref="InterPro:IPR006137" FT /db_xref="InterPro:IPR014406" FT /db_xref="UniProtKB/TrEMBL:C5A3D2" FT /inference="protein motif:CDD:COG3260, Ni,Fe-hydrogenase FT III small subunit [Energy production and conversion]" FT /inference="protein motif:CDD:FrhG, Coenzyme F420-reducing FT hydrogenase, gamma subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:NuoB, NADH:ubiquinone FT oxidoreductase 20 kD subunit and related Fe-S FT oxidoreductases [Energy production and conversion]" FT /inference="protein motif:CDD:Oxidored_q6, NADH ubiquinone FT oxidoreductase, 20 Kd subunit" FT /inference="protein motif:COG:COG3260 Ni,Fe-hydrogenase III FT small subunit; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.700 no FT description" FT /inference="protein motif:HMMPanther:PTHR11995 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR11995:SF3 FT NADH-UBIQUINONE OXIDOREDUCTASE" FT /inference="protein motif:HMMPfam:PF01058 Oxidored_q6 FT InterPro:IPR006137 NADH ubiquinone oxidoreductase, 20 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:superfamily:SSF56770 Nickel-iron FT hydrogenase, small subunit" FT /protein_id="ACS32744.1" FT /translation="MMGRRLKSVWVYHVDAGSCNGCDIEVLDVLSPYYDLERLGVKVVP FT NPRHADALFITGPLTRQTRIALKKAYEAMPPKPRIVVAVGTCASSGGIFYNSYALYNTS FT PQRGRDRLRSGGPEMIVPIDMYIPGCPPSPEEILYGVAQLLGIKEKKMKGEYWIALPPK FT ETPSKENEVEFRIPDRPIPLRYWLTLREELRRVIGYYDREAVLNDFMALVEKAFEDENP FT REKLHDLVTGYFLKEKDSRVKVAMRFLENEFWRLYDEYHSLGEALRKKYPVTAGV" FT gene complement(230562..231167) FT /gene="mhy1G" FT /locus_tag="TGAM_0243" FT /note="tg0243" FT CDS complement(230562..231167) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy1G" FT /locus_tag="TGAM_0243" FT /product="formate hydrogenlyase I subunit G (Mhy1G)" FT /EC_number="1.6.5.3" FT /db_xref="GOA:C5A3D3" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A3D3" FT /inference="protein motif:CDD:NuoI, Formate hydrogenlyase FT subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit FT (chain I) [Energy production and conversion]" FT /inference="protein motif:COG:COG1143 Formate hydrogenlyase FT subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit FT (chain I); C Energy production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR10849 FT NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 9-RELATED" FT /inference="protein motif:HMMPanther:PTHR10849:SF3 FT NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 9" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF46548 FT alpha-helical ferredoxin InterPro:IPR009051 Alpha-helical FT ferredoxin" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32745.1" FT /translation="MAESLSYTEKLKKWNRFEVEKFSKKAPVTTPYPFIDIEKPPEYRG FT IPHINPEKCIGCGACVNACPPDALILEWDKEHGVKRLTFNAARCIRCHRCVEVCPTGAM FT EPTNIFEIATDNKEDLVEVVEHKLAYCEECGEYLDFTERQIEYVKAILPKEIIDMYALE FT DRIGLTQEAKMRKTVEKLRETEGNAYPAFILVKKGGEE" FT gene complement(231167..232972) FT /gene="mhy1F" FT /locus_tag="TGAM_0244" FT /note="tg0244" FT CDS complement(231167..232972) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy1F" FT /locus_tag="TGAM_0244" FT /product="formate hydrogenlyase I subunit F (Mhy1F)" FT /EC_number="1.6.5.3" FT /db_xref="GOA:C5A3D4" FT /db_xref="InterPro:IPR001135" FT /db_xref="InterPro:IPR001268" FT /db_xref="InterPro:IPR001501" FT /db_xref="InterPro:IPR020396" FT /db_xref="UniProtKB/TrEMBL:C5A3D4" FT /inference="protein motif:BlastProDom:PD001581 FT Q9UYN4_PYRAB_Q9UYN4; InterPro:IPR001268 NADH dehydrogenase FT (ubiquinone), 30 kDa subunit GO:Biological FT Process:mitochondrial electron transport, NADH to FT ubiquinone (GO:0006120), Molecular Function:NADH FT dehydrogenase (ubiquinone) activity (GO:0008137)" FT /inference="protein motif:CDD:Complex1_30kDa, FT Respiratory-chain NADH dehydrogenase, 30 Kd subunit" FT /inference="protein motif:CDD:Complex1_49kDa, FT Respiratory-chain NADH dehydrogenase, 49 Kd subunit" FT /inference="protein motif:CDD:FrhA, Coenzyme F420-reducing FT hydrogenase, alpha subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:HyaB, Ni,Fe-hydrogenase I FT large subunit [Energy production and conversion]" FT /inference="protein motif:CDD:HycE, Ni,Fe-hydrogenase III FT component G [Energy production and conversion]" FT /inference="protein motif:CDD:HycE, Ni,Fe-hydrogenase III FT large subunit [Energy production and conversion]" FT /inference="protein motif:CDD:NuoD, NADH:ubiquinone FT oxidoreductase 49 kD subunit 7 [Energy production and FT conversion]" FT /inference="protein motif:COG:COG3261 Ni,Fe-hydrogenase III FT large subunit; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.1.10.645.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11993 NADH FT DEHYDROGNEASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11993:SF9 FORMATE FT HYDROGENLYASE" FT /inference="protein motif:HMMPfam:PF00329 Complex1_30kDa FT InterPro:IPR001268 NADH dehydrogenase (ubiquinone), 30 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:HMMPfam:PF00346 Complex1_49kDa FT InterPro:IPR001135 NADH-ubiquinone oxidoreductase, chain FT 49kDa GO:Molecular Function:electron transporter activity FT (GO:0005489), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:HMMPfam:PF00374 NiFeSe_Hases FT InterPro:IPR001501 Nickel-dependent hydrogenase, large FT subunit GO:Biological Process:electron transport FT (GO:0006118), Molecular Function:ferredoxin hydrogenase FT activity (GO:0008901), Molecular Function:nickel ion FT binding (GO:0016151)" FT /inference="protein motif:HMMPIR:PIRSF000231 FT [NiFe]-hydrogenase-3-type complex, fused large FT subunit/NADH:quinone oxidoreductase (complex I), subunit FT NuoCD" FT /inference="protein motif:ScanRegExp:PS00542 COMPLEX1_30K FT InterPro:IPR001268 NADH dehydrogenase (ubiquinone), 30 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:superfamily:SSF50203 Bacterial FT enterotoxins InterPro:IPR008992 Bacterial enterotoxin" FT /inference="protein motif:superfamily:SSF56762 Nickel-iron FT hydrogenase, large subunit" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32746.1" FT /translation="MNMVTTRDLEAHFEFECRACENGHCRKADVETILTERKGLKEFYE FT AFKEHIRECKRMTYGQYMFVIDREVLPDAVLWWHNHPEFKETHLSTAVGTDERPLNGKF FT VYMPFLNVQVEPQNMDENYWVFLKAYMPADDPSFPSVAAKLPAALWIEREVKDLLGFNP FT VGHPDPRRLILPEDWPEGVYPLRKDMDYRHSPMAEVKTEYRETPEGTTLVPMGPVHAGI FT EEPAHFRLFVKGEEIVDVDYRGFYSHRGIEKTGEGRLTYNQVLFLAERICGICGYQHSV FT SYAMAVERLADVDIPDRARYIRTLMLELERIHNHLLWVGIAAHLVGYDTGFMHAWRIRE FT PVMWLVERLTGNRKQYGMNIVGGVRRDILDYRKEEILKVVKQIREETKKFLDIALNTNT FT FIKRAEGVGILPYKVAKAYSVLGPTARASGRRIDTRLDQATKTAMAYNEVDFKVPVYKE FT GDVLARVLVRMDELFESLWIVEQLIDQMPGGDIMVPIGDLPEYEEALGFTEAHRGEVVH FT YVMTGEKNKVYRWKVRAPTYNNLPAVPEMLKGYHVADAPLIIASIDPCYSCTERVQFVD FT VETGKVKVLTEAEFNELSIKYRGVF" FT gene complement(232969..233886) FT /gene="mhy1E" FT /locus_tag="TGAM_0245" FT /note="tg0245" FT CDS complement(232969..233886) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy1E" FT /locus_tag="TGAM_0245" FT /product="formate hydrogenlyase I subunit E (Mhy1E)" FT /EC_number="1.6.5.3" FT /note="7 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3D5" FT /db_xref="InterPro:IPR001694" FT /db_xref="InterPro:IPR018086" FT /db_xref="UniProtKB/TrEMBL:C5A3D5" FT /inference="protein motif:CDD:HyfC, Formate hydrogenlyase FT subunit 4 [Energy production and conversion]" FT /inference="protein motif:CDD:NADHdh, NADH dehydrogenase" FT /inference="protein motif:CDD:NuoH, NADH:ubiquinone FT oxidoreductase subunit 1 (chain H) [Energy production and FT conversion]" FT /inference="protein motif:COG:COG0650 Formate hydrogenlyase FT subunit 4; C Energy production and conversion" FT /inference="protein motif:HMMPanther:PTHR11432 NADH FT DEHYDROGENASE SUBUNIT 1 InterPro:IPR001694 FT Respiratory-chain NADH dehydrogenase, subunit 1 FT GO:Biological Process:electron transport (GO:0006118), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:HMMPfam:PF00146 NADHdh FT InterPro:IPR001694 Respiratory-chain NADH dehydrogenase, FT subunit 1 GO:Biological Process:electron transport FT (GO:0006118), Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:ScanRegExp:PS00668 COMPLEX1_ND1_2 FT InterPro:IPR001694 Respiratory-chain NADH dehydrogenase, FT subunit 1 GO:Biological Process:electron transport FT (GO:0006118), Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32747.1" FT /translation="METTIKVGFELVGILIIFLLPPYLDGIARRVKARLQYRRGPPLMQ FT TWYDLQKLFNLPSVKPTKSLLFTAAPFLALASAISAALLLPYGNVIPVDFGFNLVVFFY FT VILMVSVFLILGGLSVQNAFSHIGATREAQLILTVEPLIAILYGVLAYNAGSLNIADII FT ANLHLTPSLVLAYIALAYALYVESGFVPFDVAEAEQEVIGGPLGEYSGRLLGVFYYAIH FT IKRFALLWFFVSLLTMPWIGPINTPERAALVLALQFILTVAFYPIIAALEATNARLRID FT QVVKMNVRMFFAGLVILGMAFMGW" FT gene complement(233897..235891) FT /gene="mhy1D" FT /locus_tag="TGAM_0246" FT /note="tg0246" FT CDS complement(233897..235891) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy1D" FT /locus_tag="TGAM_0246" FT /product="formate hydrogenlyase I subunit D (Mhy1D)" FT /EC_number="1.6.5.3" FT /note="16 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3D6" FT /db_xref="InterPro:IPR001750" FT /db_xref="UniProtKB/TrEMBL:C5A3D6" FT /inference="protein motif:CDD:HyfB, Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit FT [Energy production and conversion / Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:NuoL, NADH:ubiquinone FT oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ FT antiporter, MnhA subunit [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NuoM, NADH:ubiquinone FT oxidoreductase subunit 4 (chain M) [Energy production and FT conversion]" FT /inference="protein motif:CDD:NuoN, NADH:ubiquinone FT oxidoreductase subunit 2 (chain N) [Energy production and FT conversion]" FT /inference="protein motif:CDD:Oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains" FT /inference="protein motif:COG:COG0651 Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; C FT Energy production and conversion" FT /inference="protein motif:FPrintScan:PR01434 NADHDHGNASE5 FT InterPro:IPR003916 NADH-ubiquinone oxidoreductase, chain 5 FT GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:HMMPanther:PTHR19377 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00361 Oxidored_q1 FT InterPro:IPR001750 NADH/Ubiquinone/plastoquinone (complex FT I) GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /protein_id="ACS32748.1" FT /translation="MFLEYAIIAFIIGGVIGLVRDYRVSVKASSFMAFLGSLALLGEVY FT HVYTNGPEMFSLFGIPMNVSGLSNVFLLIIGIVGVAASLFAINYMDLFEKTGKGWVYAI FT AYNTFLASMTLVVTVDSMEYFVMSWELMTLSSFILVFFSEKARDVNASVKYYITMHFLD FT TIPLFLALGTAYSLIGNFEELTFENIGAALSTHHTSRLVFAGLLMIAFTAKAGLFPFSF FT WVAETYRAAPSHVSAIMAGAMEKMALYGILALVWKTAGIEGDAGIIVALAGMITITYAT FT LYALRENNAKRLLAYSSISQMGYIWLGIGIGMVLVPKGGFLGTIGALGAFAGLFHALNH FT AIFKASLFLSAGAVEYRTGTVDLNELGGLGRRMKFTALAALFASLAISGVPPFNGFISK FT WLIYVSGYSSSNPLLIFGAVLAVFFSAGTLAYSMKFYGAQFGGEMKRYENVEEVPAGML FT LGQWILAGLTLIIGVFPRIVVPILNEPFNAPLTENIYRIGFGSVLFSPVIFVILLGALA FT AALYLTFKPEFGKETKPWDCGSTEIDEDEYRTNAEGYYNWYEKKIGSFYRLGDWFYTVG FT AGVIHYITRAYLWMASYFTKVVDTPYTKVETLDDLREREIMNIDEEALKPLLRLLRIVK FT NVLPGMRLGTFVVLTLVVIGAVIGILIAL" FT gene complement(235898..237334) FT /gene="mhy1C" FT /locus_tag="TGAM_0247" FT /note="tg0247" FT CDS complement(235898..237334) FT /codon_start=1 FT /transl_table=11 FT /gene="mhy1C" FT /locus_tag="TGAM_0247" FT /product="formate hydrogenlyase I subunit C (Mhy1C)" FT /EC_number="1.6.5.3" FT /note="14 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3D7" FT /db_xref="InterPro:IPR001750" FT /db_xref="UniProtKB/TrEMBL:C5A3D7" FT /inference="protein motif:CDD:HyfB, Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit FT [Energy production and conversion / Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:NuoL, NADH:ubiquinone FT oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ FT antiporter, MnhA subunit [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NuoM, NADH:ubiquinone FT oxidoreductase subunit 4 (chain M) [Energy production and FT conversion]" FT /inference="protein motif:CDD:NuoN, NADH:ubiquinone FT oxidoreductase subunit 2 (chain N) [Energy production and FT conversion]" FT /inference="protein motif:CDD:Oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains" FT /inference="protein motif:COG:COG1009 NADH:ubiquinone FT oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ FT antiporter, MnhA subunit; C Energy production and FT conversion" FT /inference="protein motif:FPrintScan:PR01434 NADHDHGNASE5 FT InterPro:IPR003916 NADH-ubiquinone oxidoreductase, chain 5 FT GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:HMMPanther:PTHR19377 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00361 Oxidored_q1 FT InterPro:IPR001750 NADH/Ubiquinone/plastoquinone (complex FT I) GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /protein_id="ACS32749.1" FT /translation="MNGTVFIVSALLPFLLLLIYRTEGRTADGLAILITGLTLAINGFG FT AYAFFGSGADKVYHFSYASGNKLGEVFGLNVDVASVLMGFVSILTAFLLVLYAADYLGP FT SNRGFPLNEGKGRFYALLGLLVGSSMAFIYSTNLVQFAIFLELMAVALFYLVNFHGNAE FT GKALKAFLVLNLGVFLLLLSIVLLGNGQELANMGSLSQSTKDKVFAILTFAAFAMSSQF FT FFYSWLPDATAGPVPASAYIHAASVVPLGSFMLFRVIQYMNPGRGDFWLLGALTVALIL FT LMMIYYPLQRDAKRLIAYSTIGQTGVSYITLAYALLGHDVGLQIAIYQVVNHAFVKALA FT FMSVGAFVYSLGTTDLKGIRGIKRSLPWASVAWFLSFLGLAGVLPLGLFFSKAFTIMST FT REIGGIASWLFPAVVLFDAAIFLVVVLLWFREIFFGEPEPRAETGEPKLMIAAMVVLIL FT IGIVAPWITLDVVMKISFMG" FT gene complement(237386..237883) FT /gene="fdh1B" FT /locus_tag="TGAM_0248" FT /note="tg0248" FT CDS complement(237386..237883) FT /codon_start=1 FT /transl_table=11 FT /gene="fdh1B" FT /locus_tag="TGAM_0248" FT /product="formate dehydrogenase I subunit B (fdh1B)" FT /db_xref="GOA:C5A3D8" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A3D8" FT /inference="protein motif:CDD:HybA, Fe-S-cluster-containing FT hydrogenase components 1 [Energy production and FT conversion]" FT /inference="protein motif:CDD:HycB, Fe-S-cluster-containing FT hydrogenase components 2 [Energy production and FT conversion]" FT /inference="protein motif:CDD:NarY, Nitrate reductase beta FT subunit [Energy production and conversion]" FT /inference="protein motif:COG:COG0437 FT Fe-S-cluster-containing hydrogenase components 1; C Energy FT production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR11938 GLUTAMATE FT SYNTHASE/FERREDOXIN/FERREDOXIN--NADP REDUCTASE" FT /inference="protein motif:HMMPanther:PTHR11938:SF4 FT GLUTAMATE SYNTHASE" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF54862 4Fe-4S FT ferredoxins" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32750.1" FT /translation="MSKKIFLDYKRCIGCKACEVACEMAHGEARIRVFEFPDLFTVPFN FT CRHCEKAPCLNVCPTGALFRDKDGAVAFDPLKCIGCLMCAVACPFGVPKLDEENKIMDK FT CDLCADRRAEGLLPACVSACPTEALKFGDVNEILWNREGKVVANLKSSAEKGEGEKAYV FT IL" FT gene complement(237894..240074) FT /gene="fdh1A" FT /locus_tag="TGAM_0249" FT /note="tg0249" FT CDS complement(237894..240074) FT /codon_start=1 FT /transl_table=11 FT /gene="fdh1A" FT /locus_tag="TGAM_0249" FT /product="formate dehydrogenase I subunit A (fdh1A)" FT /EC_number="1.2.1.2" FT /db_xref="GOA:C5A3D9" FT /db_xref="InterPro:IPR006478" FT /db_xref="InterPro:IPR006655" FT /db_xref="InterPro:IPR006656" FT /db_xref="InterPro:IPR006657" FT /db_xref="InterPro:IPR006963" FT /db_xref="InterPro:IPR009010" FT /db_xref="UniProtKB/TrEMBL:C5A3D9" FT /inference="protein motif:CDD:BisC, Anaerobic FT dehydrogenases, typically selenocysteine-containing [Energy FT production and conversion]" FT /inference="protein motif:CDD:COG3383, Uncharacterized FT anaerobic dehydrogenase [General function prediction only]" FT /inference="protein motif:CDD:FwdB, Formylmethanofuran FT dehydrogenase subunit B [Energy production and conversion]" FT /inference="protein motif:CDD:Molybdopterin, Molybdopterin FT oxidoreductase" FT /inference="protein motif:CDD:Molybdopterin-Binding, FT Molybdopterin-Binding (MopB) domain of the MopB superfamily FT of proteins, a large, diverse, heterogeneous superfamily of FT enzymes that, in general, bind molybdopterin as a cofactor" FT /inference="protein motif:CDD:Molybdop_Fe4S4, Molybdopterin FT oxidoreductase Fe4S4 domain" FT /inference="protein motif:CDD:Molydop_binding, Molydopterin FT dinucleotide binding domain" FT /inference="protein motif:CDD:MopB_1, The MopB_1 CD FT includes a group of related uncharacterized bacterial FT molybdopterin-binding oxidoreductase-like domains with a FT putative N-terminal iron-sulfur [4Fe-4S] cluster binding FT site and molybdopterin cofactor binding site" FT /inference="protein motif:CDD:MopB_2, The MopB_2 CD FT includes a group of related uncharacterized bacterial FT molybdopterin-binding oxidoreductase-like domains with a FT putative N-terminal iron-sulfur [4Fe-4S] cluster binding FT site and molybdopterin cofactor binding site" FT /inference="protein motif:CDD:MopB_3, The MopB_3 CD FT includes a group of related uncharacterized bacterial and FT archaeal molybdopterin-binding oxidoreductase-like domains FT with a putative N-terminal iron-sulfur [4Fe-4S] cluster FT binding site and molybdopterin cofactor binding site" FT /inference="protein motif:CDD:MopB_4, The MopB_4 CD FT includes a group of related uncharacterized bacterial and FT archaeal molybdopterin-binding oxidoreductase-like domains FT with a putative N-terminal iron-sulfur [4Fe-4S] cluster FT binding site and molybdopterin cofactor binding site" FT /inference="protein motif:CDD:MopB_Acetylene-hydratase, The FT MopB_Acetylene-hydratase CD contains acetylene hydratase FT (Ahy) and other related proteins" FT /inference="protein motif:CDD:MopB_Arsenate-R, This CD FT includes the respiratory arsenate reductase, As(V), FT catalytic subunit (ArrA) and other related proteins" FT /inference="protein motif:CDD:MopB_Arsenite-Ox, Arsenite FT oxidase (Arsenite-Ox) oxidizes arsenite to the less toxic FT arsenate" FT /inference="protein motif:CDD:MopB_CT, FT Molybdopterin-Binding, C-terminal (MopB_CT) domain of the FT MopB superfamily of proteins, a large, diverse, FT heterogeneous superfamily of enzymes that, in general, bind FT molybdopterin as a cofactor" FT /inference="protein motif:CDD:MopB_CT_1, The MopB_CT_1 CD FT includes a group of related uncharacterized bacterial FT molybdopterin-binding oxidoreductase-like domains with a FT putative N-terminal iron-sulfur [4Fe-4S] cluster binding FT site and molybdopterin cofactor binding site" FT /inference="protein motif:CDD:MopB_CT_3, The MopB_CT_3 CD FT includes a group of related uncharacterized bacterial FT molybdopterin-binding oxidoreductase-like domains with a FT putative N-terminal iron-sulfur [4Fe-4S] cluster binding FT site and molybdopterin cofactor binding site" FT /inference="protein motif:CDD:MopB_CT_4, The MopB_CT_4 CD FT includes a group of related uncharacterized bacterial and FT archaeal molybdopterin-binding oxidoreductase-like domains FT with a putative N-terminal iron-sulfur [4Fe-4S] cluster FT binding site and molybdopterin cofactor binding site" FT /inference="protein motif:CDD:MopB_CT_Acetylene-hydratase, FT The MopB_CT_Acetylene-hydratase CD contains acetylene FT hydratase (Ahy) and other related proteins" FT /inference="protein motif:CDD:MopB_CT_Arsenite-Ox, This CD FT contains the molybdopterin_binding C-terminal (MopB_CT) FT region of Arsenite oxidase (Arsenite-Ox) and related FT proteins" FT /inference="protein motif:CDD:MopB_CT_DmsA-EC, The FT MopB_CT_DmsA-EC CD includes the DmsA enzyme of the dmsABC FT operon encoding the anaerobic dimethylsulfoxide reductase FT (DMSOR) of Escherichia coli and other related DMSOR-like FT enzymes" FT /inference="protein motif:CDD:MopB_CT_DMSOR-BSOR-TMAOR, The FT MopB_DMSOR-BSOR-TMAOR CD contains dimethylsulfoxide FT reductase (DMSOR), biotin sulfoxide reductase (BSOR), FT trimethylamine N-oxide reductase (TMAOR) and other related FT proteins" FT /inference="protein motif:CDD:MopB_CT_DMSOR-like, The FT MopB_CT_DMSOR-like CD contains dimethylsulfoxide reductase FT (DMSOR), biotin sulfoxide reductase (BSOR), trimethylamine FT N-oxide reductase (TMAOR) and other related proteins" FT /inference="protein motif:CDD:MopB_CT_Fdh-Nap-like, This CD FT includes formate dehydrogenases (Fdh) H and N" FT /inference="protein motif:CDD:MopB_CT_Formate-Dh-Na-like, FT Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a FT major component of nitrate respiration in bacteria such as FT in the E" FT /inference="protein motif:CDD:MopB_CT_Formate-Dh_H, Formate FT dehydrogenase H (Formate-Dh-H) catalyzes the reversible FT oxidation of formate to CO2 with the release of a proton FT and two electrons" FT /inference="protein motif:CDD:MopB_CT_Nitrate-R-NapA-like, FT Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB FT catalyze the reduction of nitrate to nitrite" FT /inference="protein FT motif:CDD:MopB_CT_Tetrathionate_Arsenate-R, This CD FT contains the molybdopterin_binding C-terminal (MopB_CT) FT region of tetrathionate reductase, subunit A, (TtrA)" FT /inference="protein motif:CDD:MopB_CT_Thiosulfate-R-like, FT The MopB_CT_Thiosulfate-R-like CD contains thiosulfate-, FT sulfur-, and polysulfide-reductases, and other related FT proteins" FT /inference="protein motif:CDD:MopB_DmsA-EC, This CD FT (MopB_DmsA-EC) includes the DmsA enzyme of the dmsABC FT operon encoding the anaerobic dimethylsulfoxide reductase FT (DMSOR) of Escherichia coli and other related DMSOR-like FT enzymes" FT /inference="protein motif:CDD:MopB_DMSOR-BSOR-TMAOR, The FT MopB_DMSOR-BSOR-TMAOR CD contains dimethylsulfoxide FT reductase (DMSOR), biotin sulfoxide reductase (BSOR), FT trimethylamine N-oxide reductase (TMAOR) and other related FT proteins" FT /inference="protein motif:CDD:MopB_DMSOR-like, The FT MopB_DMSOR-like CD contains dimethylsulfoxide reductase FT (DMSOR), biotin sulfoxide reductase (BSOR), trimethylamine FT N-oxide reductase (TMAOR) and other related proteins" FT /inference="protein motif:CDD:MopB_Formate-Dh-H, Formate FT dehydrogenase H (Formate-Dh-H) catalyzes the reversible FT oxidation of formate to CO2 with the release of a proton FT and two electrons" FT /inference="protein motif:CDD:MopB_Formate-Dh-Na-like, FT Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a FT major component of nitrate respiration in bacteria such as FT in the E" FT /inference="protein motif:CDD:MopB_NADH-Q-OR-NuoG2, FT MopB_NADH-Q-OR-NuoG2:The NuoG/Nad11/75-kDa subunit (second FT domain) of the NADH-quinone oxidoreductase FT (NADH-Q-OR)/respiratory complex I/NADH dehydrogenase-1 FT (NDH-1)" FT /inference="protein motif:CDD:MopB_NDH-1_NuoG2, FT MopB_NDH-1_NuoG2:The second domain of the NuoG subunit of FT the NADH-quinone oxidoreductase/NADH dehydrogenase-1 FT (NDH-1), found in beta- and gammaproteobacteria" FT /inference="protein motif:CDD:MopB_NDH-1_NuoG2-N7, FT MopB_NDH-1_NuoG2-N7:The second domain of the NuoG subunit FT (with a [4Fe-4S] cluster, N7) of the NADH-quinone FT oxidoreductase/NADH dehydrogenase-1 (NDH-1) found in FT various bacteria" FT /inference="protein motif:CDD:MopB_Nitrate-R-NapA-like, FT Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB FT catalyze the reduction of nitrate to nitrite" FT /inference="protein motif:CDD:MopB_Nitrate-R-NarG-like, FT Respiratory nitrate reductase A (NarGHI), alpha chain FT (NarG) and related proteins" FT /inference="protein motif:CDD:MopB_Phenylacetyl-CoA-OR, The FT MopB_Phenylacetyl-CoA-OR CD contains the FT phenylacetyl-CoA:acceptor oxidoreductase, large subunit FT (PadB2), and other related proteins" FT /inference="protein motif:CDD:MopB_PHLH, The MopB_PHLH CD FT includes a group of related uncharacterized putative FT hydrogenase-like homologs (PHLH) of molybdopterin binding FT (MopB) proteins" FT /inference="protein motif:CDD:MopB_Res-Cmplx1_Nad11, FT MopB_Res_Cmplx1_Nad11:The second domain of the Nad11/75-kDa FT subunit of the NADH-quinone oxidoreductase/respiratory FT complex I/NADH dehydrogenase-1(NDH-1) of eukaryotes and the FT Nqo3/G subunit of alphaproteobacteria NDH-1" FT /inference="protein motif:CDD:MopB_Tetrathionate-Ra, The FT MopB_Tetrathionate-Ra CD contains tetrathionate reductase, FT subunit A, (TtrA) and other related proteins" FT /inference="protein motif:CDD:MopB_Thiosulfate-R-like, The FT MopB_Thiosulfate-R-like CD contains thiosulfate-, sulfur-, FT and polysulfide-reductases, and other related proteins" FT /inference="protein motif:CDD:MopB_ydeP, The MopB_ydeP CD FT includes a group of related uncharacterized bacterial FT molybdopterin-binding oxidoreductase-like domains with a FT putative molybdopterin cofactor binding site" FT /inference="protein motif:CDD:NarG, Nitrate reductase alpha FT subunit [Energy production and conversion]" FT /inference="protein motif:CDD:NuoG, NADH FT dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit FT (chain G) [Energy production and conversion]" FT /inference="protein motif:COG:COG0243 Anaerobic FT dehydrogenases, typically selenocysteine-containing; C FT Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.2.40.40.20 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.228.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.90.55.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11615 FT NADH-UBIQUINONE OXIDOREDUCTASE FE-S PROTEIN 1" FT /inference="protein motif:HMMPanther:PTHR11615:SF12 FORMATE FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00384 Molybdopterin FT InterPro:IPR006656 Molybdopterin oxidoreductase FT GO:Molecular Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:HMMPfam:PF01568 Molydop_binding FT InterPro:IPR006657 Molydopterin dinucleotide-binding region FT GO:Molecular Function:oxidoreductase activity (GO:0016491), FT Molecular Function:molybdenum ion binding (GO:0030151)" FT /inference="protein motif:HMMPfam:PF04879 Molybdop_Fe4S4 FT InterPro:IPR006963 Molybdopterin oxidoreductase Fe4S4 FT region GO:Molecular Function:oxidoreductase activity FT (GO:0016491)" FT /inference="protein motif:HMMTigr:TIGR01591 FT Fdh-alpha:formate dehydrogenase, alpha sub FT InterPro:IPR006478 Formate dehydrogenase, alpha subunit FT GO:Molecular Function:formate dehydrogenase activity FT (GO:0008863), Cellular Component:formate dehydrogenase FT complex (GO:0009326), Biological Process:formate metabolism FT (GO:0015942)" FT /inference="protein motif:ScanRegExp:PS00490 FT MOLYBDOPTERIN_PROK_2 InterPro:IPR006655 Prokaryotic FT molybdopterin oxidoreductase GO:Biological Process:electron FT transport (GO:0006118), Molecular Function:oxidoreductase FT activity (GO:0016491)" FT /inference="protein motif:superfamily:SSF50692 ADC-like FT InterPro:IPR009010 Aspartate decarboxylase-like fold" FT /inference="protein motif:superfamily:SSF53706 Formate FT dehydrogenase/DMSO reductase, domains 1-3" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32751.1" FT /translation="MKHPFNTVFHISSFCFGHCRKLFKVLTFILNDWSVIRRVIAMAEK FT LVPVVCPWCSVGCRFYAVSVNGYIRKIEFDYDHPTVNRGKLCPKGVASYQFINSSKRLK FT KPLKRVGERGEGKFEEISWDEAYRIIAEKIKEIKETYGPEAIAFLGSEKITLEENYLVH FT KLSKAIGTNHLDFPGRYCQYSNAPARTKVFGSAPATNPFEDVAKAELIVIWGHNPAETA FT PVFFGQYIEKAVLDNGAEMVVIDPRATRGHKYASIHLKPYPGTDLAIALAMLNVVISEE FT LYDREFVQERTVGFEELKESVKDYTPEWAEKISGVPAEDIRKVARLIATKRTALLVNEG FT LNQHVNGFEFALALANLIAITGNIGKEGVWSGVFPGAQCGFCAAMSGIAPNKLPTGKLV FT TDEAARAELERLWGFKIPDWVGLDLTSMIREIGNTIKMMYIVGGNIAKSAPNSKWVQEQ FT LKKLDFLVVQDIFLTETAKYADIVLPAAAWFEKTGTAISAERRVQRTYKAAEAPGEAKP FT DWLILVELAKELGLGEYFKYEHPDEILREINSVIPVFKGATPEYLAEHPEGCFFPCTEP FT GEGTKILFKKGFKTADGKAHLQPVKWREPPEMPDEEYPLWLTNFRQVGHWHTGTMSFES FT PSLKKRWPEEYVMINPKDAEKYGIKSGDLVKVETKRGSVLVRAEVTEHVREGVIAMPWH FT WNVNVLTLEETHEITKMAELKAVAARVSKVEE" FT gene complement(240071..240664) FT /locus_tag="TGAM_0250" FT /note="tg0250" FT CDS complement(240071..240664) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0250" FT /product="Transcription regulator, TetR family" FT /db_xref="GOA:C5A3E0" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR015893" FT /db_xref="InterPro:IPR023772" FT /db_xref="InterPro:IPR023773" FT /db_xref="UniProtKB/TrEMBL:C5A3E0" FT /inference="protein motif:CDD:AcrR, Transcriptional FT regulator [Transcription]" FT /inference="protein motif:CDD:TetR_N, Bacterial regulatory FT proteins, tetR family" FT /inference="protein motif:COG:COG1309 Transcriptional FT regulator; K Transcription" FT /inference="protein motif:FPrintScan:PR00455 HTHTETR FT InterPro:IPR001647 Bacterial regulatory protein, TetR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:Gene3D:G3D.1.10.10.60 no FT description InterPro:IPR012287 Homeodomain-related FT GO:Molecular Function:DNA binding (GO:0003677), Biological FT Process:regulation of transcription (GO:0045449)" FT /inference="protein motif:HMMPfam:PF00440 TetR_N FT InterPro:IPR001647 Bacterial regulatory protein, TetR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:ProfileScan:PS50977 HTH_TETR_2 FT InterPro:IPR001647 Bacterial regulatory protein, TetR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:ScanRegExp:PS01081 HTH_TETR_1 FT InterPro:IPR001647 Bacterial regulatory protein, TetR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:superfamily:SSF46689 FT Homeodomain-like InterPro:IPR009057 Homeodomain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32752.1" FT /translation="MVTKSPGKTREKLVSAAMELFAKKGFDKTTVDEIVARAGVAKGTF FT YLYFKSKDDLIKELAFEVMPIMAMPSLNDPYITVSFPTLESYLLQLGREFLSFYSENYR FT AEIFFHMLSVRERMKSIDDIYHQACSELLREGARRITAYVKVGFEDALIAFQVFLASLM FT HYLHAGDCLGFSREHYLKKAVDVVLNHLRLSASV" FT gene complement(240778..241161) FT /locus_tag="TGAM_0251" FT /note="tg0251" FT CDS complement(240778..241161) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0251" FT /product="Conserved hypothetical protein" FT /note="similar to GSU2146 (Geobacter sulfurreducens PCA)" FT /db_xref="InterPro:IPR005180" FT /db_xref="UniProtKB/TrEMBL:C5A3E1" FT /protein_id="ACS32753.1" FT /translation="MEDMMKQMVKGVKSKHGFEETLERIKKKVDELGWSVIGEYDFTEK FT LGIRFAIVEICNKEFAKKALEKPENRWISAMMPCKFSIIEMPDGVYVFGMNMGLFAKIV FT PGELGELLSEVAKVDEELINSVL" FT gene 241231..241485 FT /gene="hypC-1" FT /locus_tag="TGAM_0252" FT /note="tg0252" FT CDS 241231..241485 FT /codon_start=1 FT /transl_table=11 FT /gene="hypC-1" FT /locus_tag="TGAM_0252" FT /product="[NiFe] hydrogenase maturation protein (hypC)" FT /db_xref="InterPro:IPR001109" FT /db_xref="UniProtKB/TrEMBL:C5A3E2" FT /inference="protein motif:BlastProDom:PD003112 FT Q9UZB2_PYRAB_Q9UZB2; InterPro:IPR001109 Hydrogenase FT expression/formation protein (HUPF/HYPC)" FT /inference="protein motif:CDD:HupF_HypC, HupF/HypC family" FT /inference="protein motif:COG:COG0298 Hydrogenase FT maturation factor; O Posttranslational modification, FT protein turnover, chaperones" FT /inference="protein motif:HMMPfam:PF01455 HupF_HypC FT InterPro:IPR001109 Hydrogenase expression/formation protein FT (HUPF/HYPC)" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /protein_id="ACS32754.1" FT /translation="MALMLAGRVVEVRDGKAIVDVDGQLREAKLDFVRNVKPGDYVKIY FT YGIVLEKVTREEAEETLARCSYHRSSKLELTFTVSNLKF" FT gene 241531..241791 FT /gene="hypC-2" FT /locus_tag="TGAM_0253" FT /note="tg0253" FT CDS 241531..241791 FT /codon_start=1 FT /transl_table=11 FT /gene="hypC-2" FT /locus_tag="TGAM_0253" FT /product="[NiFe] hydrogenase maturation protein (hypC)" FT /db_xref="InterPro:IPR001109" FT /db_xref="UniProtKB/TrEMBL:C5A3E3" FT /inference="protein motif:BlastProDom:PD003112 FT Q9UZB2_PYRAB_Q9UZB2; InterPro:IPR001109 Hydrogenase FT expression/formation protein (HUPF/HYPC)" FT /inference="protein motif:CDD:HupF_HypC, HupF/HypC family" FT /inference="protein motif:CDD:HypC, Hydrogenase maturation FT factor [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:COG:COG0298 Hydrogenase FT maturation factor; O Posttranslational modification, FT protein turnover, chaperones" FT /inference="protein motif:FPrintScan:PR00445 HUPFHYPC FT InterPro:IPR001109 Hydrogenase expression/formation protein FT (HUPF/HYPC)" FT /inference="protein motif:HMMPfam:PF01455 HupF_HypC FT InterPro:IPR001109 Hydrogenase expression/formation protein FT (HUPF/HYPC)" FT /inference="protein motif:HMMPIR:PIRSF005618 FT [NiFe]-hydrogenase maturation chaperone InterPro:IPR001109 FT Hydrogenase expression/formation protein (HUPF/HYPC)" FT /inference="protein motif:HMMTigr:TIGR00074 FT hypC_hupF:hydrogenase assembly chaperone H FT InterPro:IPR001109 Hydrogenase expression/formation protein FT (HUPF/HYPC)" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /protein_id="ACS32755.1" FT /translation="MCLATVAKVLEVNREKGTAWVDFGGVKREARIDLMPDVKPGEYVL FT IHTGFIIEKVDEQTAKEILSAWEEVFKAEENALGGYYYPGD" FT gene 241793..242917 FT /gene="hypD" FT /locus_tag="TGAM_0254" FT /note="tg0254" FT CDS 241793..242917 FT /codon_start=1 FT /transl_table=11 FT /gene="hypD" FT /locus_tag="TGAM_0254" FT /product="[NiFe] hydrogenase maturation protein (hypD)" FT /db_xref="GOA:C5A3E4" FT /db_xref="InterPro:IPR002780" FT /db_xref="UniProtKB/TrEMBL:C5A3E4" FT /inference="protein motif:CDD:HypD, Hydrogenase formation FT hypA family" FT /inference="protein motif:COG:COG0409 Hydrogenase FT maturation factor; O Posttranslational modification, FT protein turnover, chaperones" FT /inference="protein motif:Gene3D:G3D.3.40.50.1420 no FT description" FT /inference="protein motif:HMMPfam:PF01924 HypD FT InterPro:IPR002780 Hydrogenase formation HypD protein" FT /inference="protein motif:HMMPIR:PIRSF005622 FT [NiFe]-hydrogenase maturation factor, HypD type FT InterPro:IPR002780 Hydrogenase formation HypD protein" FT /inference="protein motif:HMMTigr:TIGR00075 FT hypD:hydrogenase expression/formation prote FT InterPro:IPR002780 Hydrogenase formation HypD protein" FT /inference="protein motif:superfamily:SSF52402 Adenine FT nucleotide alpha hydrolases-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32756.1" FT /translation="MSLQSVLAPYRDREIAQKLVEKIKEEAKTLDGEIRIMHVCGTHED FT TITRSGIRSLLPENVKVVSGPGCPVCITPVEDIVAMQLIMKKAREEGDEIILTTFGDMY FT KIPTPMGSFADLKSEGYDVRVVYSIYDAYKMAKENPDKTVVHFSPGFETTTAPTAGMLN FT AVVNEDIENFKIYSVHRLTPQGIEVLIKQKSRIDALIDAGHVSTIIGVRGWEFLSEKYG FT IPQVIAGFEPNDVLLAILLLIRMYKEGDARVVNEYKRAVKYEGNVVAQELMNRYFKVVD FT AKWRALGVFPKTGLEVRDEFKELEIRNSYRVEVPKNLPDLEKGCLCGAVLRGLAMPTDC FT PHFGKTCTPRHPIGPCMVSYEGTCHIFYKYGALF" FT gene 243009..245327 FT /gene="hypF" FT /locus_tag="TGAM_0255" FT /note="tg0255" FT CDS 243009..245327 FT /codon_start=1 FT /transl_table=11 FT /gene="hypF" FT /locus_tag="TGAM_0255" FT /product="[NiFe] hydrogenase maturation protein (hypF)" FT /db_xref="GOA:C5A3E5" FT /db_xref="InterPro:IPR000905" FT /db_xref="InterPro:IPR001792" FT /db_xref="InterPro:IPR004421" FT /db_xref="InterPro:IPR006070" FT /db_xref="InterPro:IPR011125" FT /db_xref="InterPro:IPR017945" FT /db_xref="UniProtKB/TrEMBL:C5A3E5" FT /inference="protein motif:BlastProDom:PD001884 FT Q8U3B1_PYRFU_Q8U3B1; InterPro:IPR001792 Acylphosphatase FT GO:Molecular Function:acylphosphatase activity FT (GO:0003998)" FT /inference="protein motif:BlastProDom:PD002209 FT Q9UZB4_PYRAB_Q9UZB4; InterPro:IPR006071 SUA5/yciO/yrdC" FT /inference="protein motif:BlastProDom:PD002367 FT Q8PZ92_METMA_Q8PZ92; InterPro:IPR000905 Peptidase M22, FT glycoprotease GO:Biological Process:proteolysis FT (GO:0006508), Molecular Function:O-sialoglycoprotein FT endopeptidase activity (GO:0008450)" FT /inference="protein motif:COG:COG0068 Hydrogenase FT maturation factor; O Posttranslational modification, FT protein turnover, chaperones" FT /inference="protein motif:Gene3D:G3D.2.10.110.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.30.70.100 no FT description" FT /inference="protein motif:Gene3D:G3D.3.90.870.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10029 FT ACYLPHOSPHATASE-RELATED" FT /inference="protein motif:HMMPfam:PF00708 Acylphosphatase FT InterPro:IPR001792 Acylphosphatase GO:Molecular FT Function:acylphosphatase activity (GO:0003998)" FT /inference="protein motif:HMMPfam:PF01300 Sua5_yciO_yrdC FT InterPro:IPR006070 SUA5/yciO/yrdC, N-terminal" FT /inference="protein motif:HMMPfam:PF07503 zf-HYPF FT InterPro:IPR011125 Zinc finger, HypF GO:Molecular FT Function:zinc ion binding (GO:0008270)" FT /inference="protein motif:HMMPIR:PIRSF006256 Carbamoyl FT phosphate-converting enzyme ([NiFe]-hydrogenase maturation FT factor) InterPro:IPR004421 Hydrogenase maturation protein FT HypF GO:Molecular Function:transcription regulator activity FT (GO:0030528)" FT /inference="protein motif:HMMTigr:TIGR00143 hypF:[NiFe] FT hydrogenase maturation protein InterPro:IPR004421 FT Hydrogenase maturation protein HypF GO:Molecular FT Function:transcription regulator activity (GO:0030528)" FT /inference="protein motif:superfamily:SSF54975 FT Acylphosphatase-like" FT /inference="protein motif:superfamily:SSF55821 YrdC/RibB" FT /inference="protein motif:superfamily:SSF57716 FT Glucocorticoid receptor-like (DNA-binding domain)" FT /inference="protein motif:superfamily:SSF57783" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32757.1" FT /translation="MKAYRIHVQGIVQAVGFRPFIYRIAHEHNLRGYVKNLGDAGVEIV FT VEGREEDIEAFIRDIHRKKPPLARIDRLEKKEIPPQGFPEFYIEKSSKGGRGGDSIIPP FT DIAICEDCLRELFDPTNKRYMYPFIVCTNCGPRFTIIEDLPYDRENTTMREFPMCDFCR FT SEYEDPLNRRYHAEPIACPVCGPSYRLYTSDGEEITGDPLRKAAELIDRGYIVAIKGIG FT GIHLACDATNEEVVAELRKRTFRPQKPFAIMADSLETVRSFAYVSREEEEELTSYRRPI FT ITLRKREPFPLPENLAPGLHTIGVMLPYAGTHYILFHWSKTKVYVMTSANYPGMPMVKD FT NERAFEELRDMADYLLLHNRKILNRADDSVIRFVDGRRAVIRRSRGFVPLPIEIPFNYR FT GLAVGAELMNAFGVAKNGKVYPSQYIGNTGKVEVLEFMREAIEHFKRILRVKEFDLIVA FT DLHPTYNTTKLAMELANEMGVELLQVQHHYAHIASVLAEKNLESAVGIAVDGVGYGTDG FT NVWGGEVLYLGYEDVERLAHIDYYPLPGGDLASYYPLRALMGILSKVYGIDALEGVIRK FT CCPKAIESLKYGEVEFSVALNQLAKGINLAYASSTGRVLDAFAVLLNVAYRRHYEGEPA FT MKLESFAMKGKNDLGFTVPIEGELIRVEELFTQALDVLEKASPADIAYSVHLALARAFA FT GVAIEKAREFGVKDVVMSGGVAYNELIVKTVRKAVEASGLRFHVTTEVPRGDNGINVGQ FT AFLGGLYLEGYLTKEDLML" FT gene 245361..245612 FT /locus_tag="TGAM_0256" FT /note="tg0256" FT CDS 245361..245612 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0256" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3E6" FT /protein_id="ACS32758.1" FT /translation="MGVMGKVITIRVPDWIGDDFIKRIERMVEEEIERAFASGRVDRET FT YLRFVETYSTTKDVLLENDEELLAEMRKKEKARINDSY" FT gene 245599..245925 FT /locus_tag="TGAM_0257" FT /note="tg0257" FT CDS 245599..245925 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0257" FT /product="Nucleotide binding protein, putative, containing FT PIN domain" FT /db_xref="InterPro:IPR002716" FT /db_xref="UniProtKB/TrEMBL:C5A3E7" FT /inference="protein motif:COG:COG1487 Predicted nucleic FT acid-binding protein, contains PIN domain; R General FT function prediction only" FT /inference="protein motif:HMMPfam:PF01850 PIN FT InterPro:IPR002716 PilT protein, N-terminal" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /protein_id="ACS32759.1" FT /translation="MTVIDTNVVMRRVKTGEEISENITEVTAVEYPPVLSYRKFNGEIL FT LITRRTVAIAIELQRKLREIGKPKQFADLMIAAICIANGEKLITYDSDFKDIADVSELE FT VEVL" FT gene 245925..246251 FT /locus_tag="TGAM_0258" FT /note="tg0258" FT CDS 245925..246251 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0258" FT /product="Nucleotidyltransferase" FT /db_xref="GOA:C5A3E8" FT /db_xref="InterPro:IPR002934" FT /db_xref="UniProtKB/TrEMBL:C5A3E8" FT /inference="protein motif:COG:COG1708 Predicted FT nucleotidyltransferases; R General function prediction FT only" FT /inference="protein motif:Gene3D:G3D.3.30.460.10 no FT description" FT /inference="protein motif:HMMPfam:PF01909 NTP_transf_2 FT InterPro:IPR002934 DNA polymerase, beta-like region FT GO:Molecular Function:nucleotidyltransferase activity FT (GO:0016779)" FT /inference="protein motif:ProfileScan:PS50153 PAP FT InterPro:IPR001201 PAP/25A core GO:Molecular FT Function:nucleic acid binding (GO:0003676)" FT /inference="protein motif:superfamily:SSF81301 FT Nucleotidyltransferase" FT /protein_id="ACS32760.1" FT /translation="MPVIPREELLEILREVKERLRDILGDDLVEVILFGSYARGEARED FT SDVDVLVVVRRRVTLEEYDRLSEITEKYVLEKGLVISLIVYPISPGMEHDPLIQNVHVE FT GIKV" FT gene 246248..246640 FT /locus_tag="TGAM_0259" FT /note="tg0259" FT CDS 246248..246640 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0259" FT /product="conserved hypothetical protein" FT /note="Contains DUF103 domain and Nucleotidyltransferase FT substrate binding subunit/domain" FT /db_xref="InterPro:IPR007842" FT /db_xref="UniProtKB/TrEMBL:C5A3E9" FT /inference="protein motif:BlastProDom:PD015886 FT Y142_METJA_Q57607; InterPro:IPR002806 Protein of unknown FT function DUF103" FT /inference="protein motif:CDD:COG1895, Uncharacterized FT conserved protein related to C-terminal domain of FT eukaryotic chaperone, SACSIN [Function unknown]" FT /inference="protein motif:CDD:DUF103, Protein of unknown FT function DUF103" FT /inference="protein motif:COG:COG1895 Uncharacterized FT conserved protein related to C-terminal domain of FT eukaryotic chaperone, SACSIN; S Function unknown" FT /inference="protein motif:HMMPfam:PF01953 DUF103 FT InterPro:IPR002806 Protein of unknown function DUF103" FT /inference="protein motif:superfamily:SSF81593 FT Nucleotidyltransferase substrate binding subunit/domain" FT /protein_id="ACS32761.1" FT /translation="MNKYEEMLKKAHESLEASKTLLEKGFYAFALSRAYYTMFYCAEAI FT LLTKGISVSKHSAVIALFGREFVKTGEVPHKFFTHLRTAFNLRQTADYSFVVDITEEEA FT RENIRRAEEFLGFTRSYLSSKGFLEG" FT gene 246643..247659 FT /gene="hypE" FT /locus_tag="TGAM_0260" FT /note="tg0260" FT CDS 246643..247659 FT /codon_start=1 FT /transl_table=11 FT /gene="hypE" FT /locus_tag="TGAM_0260" FT /product="[NiFe] hydrogenase maturation protein (hypE)" FT /db_xref="GOA:C5A3F0" FT /db_xref="InterPro:IPR000728" FT /db_xref="InterPro:IPR010918" FT /db_xref="InterPro:IPR011854" FT /db_xref="InterPro:IPR016188" FT /db_xref="UniProtKB/TrEMBL:C5A3F0" FT /inference="protein motif:CDD:AIRS, AIR synthase related FT protein, N-terminal domain" FT /inference="protein motif:CDD:AIRS_C, AIR synthase related FT protein, C-terminal domain" FT /inference="protein motif:CDD:COG2144, Selenophosphate FT synthetase-related proteins [General function prediction FT only]" FT /inference="protein motif:CDD:HypE, Hydrogenase maturation FT factor [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:HypE_N, HypE (Hydrogenase FT expression/formation protein)" FT /inference="protein motif:CDD:PurL, FT Phosphoribosylformylglycinamidine (FGAM) synthase, FT synthetase domain [Nucleotide transport and metabolism]" FT /inference="protein motif:CDD:PurM, FT Phosphoribosylaminoimidazole (AIR) synthetase [Nucleotide FT transport and metabolism]" FT /inference="protein motif:CDD:PurM_N_like, AIR synthase FT related protein, N-terminal domain" FT /inference="protein motif:CDD:SelD, Selenophosphate FT synthase [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ThiL, Thiamine monophosphate FT kinase [Coenzyme metabolism]" FT /inference="protein motif:COG:COG0309 Hydrogenase FT maturation factor; O Posttranslational modification, FT protein turnover, chaperones" FT /inference="protein motif:Gene3D:G3D.3.30.70.460 no FT description" FT /inference="protein motif:HMMPanther:PTHR10256 FT SELENOPHOSPHATE SYNTHASE" FT /inference="protein motif:HMMPfam:PF00586 AIRS FT InterPro:IPR000728 AIR synthase related protein FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMPfam:PF02769 AIRS_C FT InterPro:IPR010918 AIR synthase related protein, FT C-terminal" FT /inference="protein motif:HMMPIR:PIRSF005644 FT [NiFe]-hydrogenase maturation factor, AIR synthase-related, FT HypE type InterPro:IPR011854 Hydrogenase FT expression/formation protein HypE" FT /inference="protein motif:HMMTigr:TIGR02124 FT hypE:hydrogenase expression/formation prote FT InterPro:IPR011854 Hydrogenase expression/formation protein FT HypE" FT /inference="protein motif:superfamily:SSF55326 FT Aminoimidazole ribonucleotide synthetase (PurM) N-terminal FT domain" FT /inference="protein motif:superfamily:SSF56042 FT Aminoimidazole ribonucleotide synthetase (PurM) C-terminal FT domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32762.1" FT /translation="MGEKIKLEHGAGGEIMEELLRNVILKTLTLKSAGGIGLDALDDGA FT TIPFGDKYIVFTIDGHTVKPLFFPGGDIGRLAVSGTVNDLAVMGAKPLALANSMIIGEG FT LDMEVLERVLRSMDETAREVPVPIVTGDTKVVEEPIEMFVITAGVGIAERPISDAGAKV FT GDVVLVSGTIGDHGIALMSHREGIAFETELKSDVAPIWEVVEAVAKAIGWENIHAMKDP FT TRAGLSNALNEIARKSNVGILVREDAIPVKPEVRAASEMLGISPYDVANEGKVVMVVAR FT EYAEEALEAMRKTERGKDAAIIGEVIEEYRGKVLLETGIGGKRFMEPPEGDPVPRIC" FT gene complement(247723..248727) FT /gene="porB" FT /locus_tag="TGAM_0261" FT /note="tg0261" FT CDS complement(247723..248727) FT /codon_start=1 FT /transl_table=11 FT /gene="porB" FT /locus_tag="TGAM_0261" FT /product="Pyruvate synthase subunit porB (pyruvate FT oxidoreductase beta chain) (pyruvate ferredoxin FT oxidoreductase) (porB)" FT /EC_number="1.2.7.1" FT /db_xref="GOA:C5A3F1" FT /db_xref="InterPro:IPR011766" FT /db_xref="UniProtKB/TrEMBL:C5A3F1" FT /inference="protein motif:CDD:PorB, Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, beta subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:TPP_enzyme_C, Thiamine FT pyrophosphate enzyme, C-terminal TPP binding domain" FT /inference="protein motif:CDD:TPP_OGFOR, Thiamine FT pyrophosphate (TPP family), 2-oxoglutarate ferredoxin FT oxidoreductase (OGFOR) subfamily, TPP-binding module" FT /inference="protein motif:CDD:TPP_PFOR, Thiamine FT pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin FT oxidoreductase (PFOR) subfamily, TPP-binding module" FT /inference="protein motif:CDD:TPP_PFOR_PNO, Thiamine FT pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding FT module" FT /inference="protein motif:CDD:TPP_PFOR_porB_like, Thiamine FT pyrophosphate (TPP family), PFOR porB-like subfamily, FT TPP-binding module" FT /inference="protein motif:COG:COG1013 Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, beta subunit; C Energy production and FT conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.970 no FT description" FT /inference="protein motif:HMMPfam:PF02775 TPP_enzyme_C FT InterPro:IPR011766 Thiamine pyrophosphate enzyme, FT C-terminal TPP-binding GO:Molecular Function:catalytic FT activity (GO:0003824), Molecular Function:thiamin FT pyrophosphate binding (GO:0030976)" FT /inference="protein motif:superfamily:SSF52518 Thiamin FT diphosphate-binding fold (THDP-binding)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32763.1" FT /translation="MMKMAVRKPPITTREYWAPGHAACAGCGCAIALKLATKAFSEAME FT EKYGDPNAFAIAQATGCMEVVSAVFPYTAWKVPWVHVAFENAAAAASGIEAAWKKKGLK FT GKILAIGGDGGTADIGLQALSGMLERRHNVVYLMYDNEAYMNTGIQRSSSTPYGAWTTT FT SPPGKYSIGEDKPKKWVALIAAAHQVPYVATASIGNPFDFVRKMKKAAKVDGPAFVQVH FT CTCPTGWKSPLEKGVEIARLAIETGIWPLFEIENGDFHNIKIQSPGGGAKVKREGGKVV FT AIEFKKPIEEYLKLQGRFKHLFKRPEAIDQLREQIKAMWKVLGVEVTLPKPEE" FT gene complement(248729..249913) FT /gene="porA" FT /locus_tag="TGAM_0262" FT /note="tg0262" FT CDS complement(248729..249913) FT /codon_start=1 FT /transl_table=11 FT /gene="porA" FT /locus_tag="TGAM_0262" FT /product="Pyruvate synthase subunit porA (pyruvate FT oxidoreductase alpha chain) (pyruvate ferredoxin FT oxidoreductase) (porA)" FT /EC_number="1.2.7.1" FT /db_xref="GOA:C5A3F2" FT /db_xref="InterPro:IPR002880" FT /db_xref="InterPro:IPR005476" FT /db_xref="InterPro:IPR009014" FT /db_xref="InterPro:IPR015941" FT /db_xref="UniProtKB/TrEMBL:C5A3F2" FT /inference="protein motif:CDD:PorA, Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, alpha subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:POR_N, Pyruvate FT flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding FT domain" FT /inference="protein motif:COG:COG0674 Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, alpha subunit; C Energy production and FT conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.920 no FT description InterPro:IPR009014 Transketolase, FT C-terminal-like" FT /inference="protein motif:Gene3D:G3D.3.40.50.970 no FT description" FT /inference="protein motif:HMMPfam:PF01855 POR_N FT InterPro:IPR002880 Pyruvate flavodoxin/ferredoxin FT oxidoreductase, N-terminal GO:Biological Process:electron FT transport (GO:0006118), Molecular Function:oxidoreductase FT activity (GO:0016491)" FT /inference="protein motif:HMMPfam:PF02780 Transketolase_C FT InterPro:IPR005476 Transketolase, C-terminal" FT /inference="protein motif:superfamily:SSF52518 Thiamin FT diphosphate-binding fold (THDP-binding)" FT /inference="protein motif:superfamily:SSF52922 TK FT C-terminal domain-like InterPro:IPR009014 Transketolase, FT C-terminal-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32764.1" FT /translation="MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVA FT NGELDAEFIKVESEHSAISACVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVM FT AIGNRSLSAPINIWNDWQDSISERDTGWLQFYAENNQEALDLILIAYKVAEDERVLLPA FT MVGFDAFILTHTVEPVEIPDQEVVDEFLGEYEPKHAYVDPKRPITQGTLAFPAHYMEAR FT YTVWEANENARKVIDEAFAEFEKRFGRKYQKVEEYRTDDAEIIFVTMGSLAGTVKEYVD FT HLREKGIKAGAAKLTVYRPFPIEEVRALAKKAKVLALLEKNVTFSVGGALFQDFSRALI FT NEKEKPIIIDYIVGLGGRDVTFQNLDEALAIAQKALNGEEFEEVNWIGLRKEIL" FT gene complement(249925..250242) FT /gene="porD" FT /locus_tag="TGAM_0263" FT /note="tg0263" FT CDS complement(249925..250242) FT /codon_start=1 FT /transl_table=11 FT /gene="porD" FT /locus_tag="TGAM_0263" FT /product="Pyruvate synthase subunit porD (pyruvate FT oxidoreductase delta chain) (pyruvate ferredoxin FT oxidoreductase) (porD)" FT /EC_number="1.2.7.1" FT /db_xref="GOA:C5A3F3" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR011898" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A3F3" FT /inference="protein motif:CDD:COG1144, Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, delta subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:COG1149, MinD superfamily FT P-loop ATPase containing an inserted ferredoxin domain FT [Energy production and conversion]" FT /inference="protein motif:COG:COG1144 Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, delta subunit; C Energy production and FT conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR19248 RNASE L FT INHIBITOR-RELATED" FT /inference="protein motif:HMMPanther:PTHR19248:SF2 RNASE L FT INHIBITOR" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:HMMTigr:TIGR02179 FT PorD_KorD:2-oxoacid:acceptor oxidoreductas FT InterPro:IPR011898 2-oxoacid:acceptor oxidoreductase, delta FT subunit, pyruvate/2-ketoisovalerate GO:Molecular FT Function:iron ion binding (GO:0005506), Biological FT Process:electron transport (GO:0006118), Molecular FT Function:oxidoreductase activity, acting on the aldehyde or FT oxo group of donors, iron-sulfur protein as acceptor FT (GO:0016625)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF54862 4Fe-4S FT ferredoxins" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32765.1" FT /translation="MAESPFKADIERVQKEYSEKMTPGAIAYIPGSSVINKTGSWRVFM FT PEFYRDKCVRCYLCYIYCPEPAIYLDEENYPVFDYDYCKGCGICANECPTDAIVMVRES FT K" FT gene complement(250292..251227) FT /gene="vorB" FT /locus_tag="TGAM_0264" FT /note="tg0264" FT CDS complement(250292..251227) FT /codon_start=1 FT /transl_table=11 FT /gene="vorB" FT /locus_tag="TGAM_0264" FT /product="Ketoisovalerate oxidoreductase subunit vorB FT (vorB)" FT /EC_number="1.2.7.7" FT /db_xref="GOA:C5A3F4" FT /db_xref="InterPro:IPR011766" FT /db_xref="UniProtKB/TrEMBL:C5A3F4" FT /inference="protein motif:CDD:PorB, Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, beta subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:TPP_enzyme_C, Thiamine FT pyrophosphate enzyme, C-terminal TPP binding domain" FT /inference="protein motif:CDD:TPP_OGFOR, Thiamine FT pyrophosphate (TPP family), 2-oxoglutarate ferredoxin FT oxidoreductase (OGFOR) subfamily, TPP-binding module" FT /inference="protein motif:CDD:TPP_PFOR, Thiamine FT pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin FT oxidoreductase (PFOR) subfamily, TPP-binding module" FT /inference="protein motif:CDD:TPP_PFOR_PNO, Thiamine FT pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding FT module" FT /inference="protein motif:CDD:TPP_PFOR_porB_like, Thiamine FT pyrophosphate (TPP family), PFOR porB-like subfamily, FT TPP-binding module" FT /inference="protein motif:COG:COG1013 Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, beta subunit; C Energy production and FT conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.970 no FT description" FT /inference="protein motif:HMMPanther:PTHR19384 FT NADPH-CYTOCHROME P450 REDUCTASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR19384:SF15 FT NADPH-DEPENDENT FMN AND FAD CONTAINING OXIDOREDUCTASE" FT /inference="protein motif:HMMPfam:PF02775 TPP_enzyme_C FT InterPro:IPR011766 Thiamine pyrophosphate enzyme, FT C-terminal TPP-binding GO:Molecular Function:catalytic FT activity (GO:0003824), Molecular Function:thiamin FT pyrophosphate binding (GO:0030976)" FT /inference="protein motif:superfamily:SSF52518 Thiamin FT diphosphate-binding fold (THDP-binding)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32766.1" FT /translation="MEIPESIKKRLTIPAEEHFFAGHTACQGCGASLGLRYVLKAYGKK FT TIVVIPACCSTIIAGAWPYNTLDANLFHTAFETTGAVISGIEAALKARGIKVKGEDGVM FT VVGWAGDGGTADIGLQALSGFLERGHDAVYIMYDNEAYMNTGIQRSSSTPYGAWTTNTP FT GGKMHFLEKRHKKKVIDIVIAHEVPYAATASVAFPEDFIRKLKKARKIPGPSFIQLFSP FT CPTGWRSPTDKSIEIARLAVQTAYFPLFEYENGKYKINMPSPKKEPKPIEEFLKLQGRF FT KYMTREDIENLQAWVLREWEKLKKLAEVFG" FT gene complement(251233..252420) FT /gene="vorA" FT /locus_tag="TGAM_0265" FT /note="tg0265" FT CDS complement(251233..252420) FT /codon_start=1 FT /transl_table=11 FT /gene="vorA" FT /locus_tag="TGAM_0265" FT /product="Ketoisovalerate oxidoreductase subunit vorA FT (vorA)" FT /EC_number="1.2.7.7" FT /db_xref="GOA:C5A3F5" FT /db_xref="InterPro:IPR002880" FT /db_xref="InterPro:IPR009014" FT /db_xref="InterPro:IPR015941" FT /db_xref="UniProtKB/TrEMBL:C5A3F5" FT /inference="protein motif:CDD:COG4231, Indolepyruvate FT ferredoxin oxidoreductase, alpha and beta subunits [Energy FT production and conversion]" FT /inference="protein motif:CDD:PorA, Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, alpha subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:POR_N, Pyruvate FT flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding FT domain" FT /inference="protein motif:COG:COG0674 Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, alpha subunit; C Energy production and FT conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.920 no FT description InterPro:IPR009014 Transketolase, FT C-terminal-like" FT /inference="protein motif:Gene3D:G3D.3.40.50.970 no FT description" FT /inference="protein motif:HMMPfam:PF01855 POR_N FT InterPro:IPR002880 Pyruvate flavodoxin/ferredoxin FT oxidoreductase, N-terminal GO:Biological Process:electron FT transport (GO:0006118), Molecular Function:oxidoreductase FT activity (GO:0016491)" FT /inference="protein motif:superfamily:SSF52518 Thiamin FT diphosphate-binding fold (THDP-binding)" FT /inference="protein motif:superfamily:SSF52922 TK FT C-terminal domain-like InterPro:IPR009014 Transketolase, FT C-terminal-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32767.1" FT /translation="MAEYKPIRKVVSGNYAAAYAVKHARVQVVAAYPITPQTSIIEKIA FT EFIANGEADIQYVPVESEHSAMAASIGASAAGARAFTATSAQGLALMHEMLHWASGARL FT PVVMVNVNRAMAPPWSVWDDQTDSLAQRDTGWMQFYAENNQEVYDGVLMSFKVAETVNV FT PAMVIESAFILSHTYDVVEMIPQELVDEFLPPRKPLYDLADFSRAISVGALATPNDYYE FT FRYKLAKAMEDAKKVIKDVGKEFGERFGRDYSEMIEKGYVDDADFVFMGMGSLMGTVKE FT AVDLLRKEGYKVGYAKVRWFRPFPKEELLEIAESVKGIAVLDRNFSFGQEGILFNEAKG FT VLYNTSARPIMKNYIVGLGGRDFTVPDVKAIAEDMKRVIEAGKLDREVEWYHLKR" FT gene complement(252422..252739) FT /gene="vorD" FT /locus_tag="TGAM_0266" FT /note="tg0266" FT CDS complement(252422..252739) FT /codon_start=1 FT /transl_table=11 FT /gene="vorD" FT /locus_tag="TGAM_0266" FT /product="Ketoisovalerate oxidoreductase subunit vorD FT (vorD)" FT /EC_number="1.2.7.7" FT /db_xref="GOA:C5A3F6" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR011898" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A3F6" FT /inference="protein motif:CDD:COG1144, Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, delta subunit [Energy production and FT conversion]" FT /inference="protein motif:CDD:COG1149, MinD superfamily FT P-loop ATPase containing an inserted ferredoxin domain FT [Energy production and conversion]" FT /inference="protein motif:COG:COG1144 Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, delta subunit; C Energy production and FT conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR11780 FT NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 (NDUFV1)" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:HMMTigr:TIGR02179 FT PorD_KorD:2-oxoacid:acceptor oxidoreductas FT InterPro:IPR011898 2-oxoacid:acceptor oxidoreductase, delta FT subunit, pyruvate/2-ketoisovalerate GO:Molecular FT Function:iron ion binding (GO:0005506), Biological FT Process:electron transport (GO:0006118), Molecular FT Function:oxidoreductase activity, acting on the aldehyde or FT oxo group of donors, iron-sulfur protein as acceptor FT (GO:0016625)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF54862 4Fe-4S FT ferredoxins" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32768.1" FT /translation="MNTLFGEKKTEAKKIVFTSVDQYPEAPISLATTLSNFTGDWRTFI FT PVIIEEKCVKCYICWKFCPEPAIYIREDGYVGIDYDYCKGCGICANECPTNAITMEKEE FT K" FT gene complement(252776..253333) FT /gene="porG" FT /locus_tag="TGAM_0267" FT /note="tg0267" FT CDS complement(252776..253333) FT /codon_start=1 FT /transl_table=11 FT /gene="porG" FT /locus_tag="TGAM_0267" FT /product="Pyruvate/ketoisovalerate oxidoreductases common FT gamma subunit (porG)" FT /EC_number="1.2.7.7" FT /EC_number="1.2.7.1" FT /db_xref="GOA:C5A3F7" FT /db_xref="InterPro:IPR002869" FT /db_xref="InterPro:IPR011894" FT /db_xref="InterPro:IPR019752" FT /db_xref="UniProtKB/TrEMBL:C5A3F7" FT /inference="protein motif:CDD:POR, Pyruvate FT ferredoxin/flavodoxin oxidoreductase" FT /inference="protein motif:CDD:PorG, Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, gamma subunit [Energy production and FT conversion]" FT /inference="protein motif:COG:COG1014 Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, gamma subunit; C Energy production and FT conversion" FT /inference="protein motif:Gene3D:G3D.3.40.920.10 no FT description" FT /inference="protein motif:HMMPfam:PF01558 POR FT InterPro:IPR002869 Pyruvate ferredoxin/flavodoxin FT oxidoreductase GO:Biological Process:electron transport FT (GO:0006118), Molecular Function:oxidoreductase activity FT (GO:0016491)" FT /inference="protein motif:HMMTigr:TIGR02175 FT PorC_KorC:2-oxoacid:acceptor oxidoreductas FT InterPro:IPR011894 2-oxoacid:acceptor oxidoreductase, gamma FT subunit, pyruvate/2-ketoisovalerate GO:Molecular FT Function:oxidoreductase activity, acting on the aldehyde or FT oxo group of donors, iron-sulfur protein as acceptor FT (GO:0016625)" FT /inference="protein motif:superfamily:SSF53323 FT Pyruvate-ferredoxin oxidoreductase, PFOR, domain III" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32769.1" FT /translation="MIEIRFHGRGGQGAVTAANILASAAFKEGKYVQAFPFFGVERRGA FT PVTAFTRIDDKPIRIKTQIYEPDIVVVLDPSLLETVDVTAGLKDGGIVIINTEKSKEEV FT LEKLKKKPGKLALVDATSIALEVLGLPITNTAILGAVAKATGLVKLESVQEAIKETFSG FT ALGEKNAKAAEEAFNKTTVYEL" FT gene 253551..254513 FT /locus_tag="TGAM_0268" FT /note="tg0268" FT CDS 253551..254513 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0268" FT /product="Phosphate transporter" FT /note="Belongs to PHO-4 family; 9 probable transmembrane FT helices predicted by modhmm" FT /db_xref="GOA:C5A3F8" FT /db_xref="InterPro:IPR001204" FT /db_xref="UniProtKB/TrEMBL:C5A3F8" FT /inference="protein motif:CDD:PHO4, Phosphate transporter FT family" FT /inference="protein motif:CDD:PitA, Phosphate/sulphate FT permeases [Inorganic ion transport and metabolism]" FT /inference="protein motif:COG:COG0306 Phosphate/sulphate FT permeases; P Inorganic ion transport and metabolism" FT /inference="protein motif:HMMPanther:PTHR11101 PHOSPHATE FT TRANSPORTER-RELATED InterPro:IPR001204 Phosphate FT transporter GO:Molecular Function:inorganic phosphate FT transporter activity (GO:0005315), Biological FT Process:phosphate transport (GO:0006817), Cellular FT Component:membrane (GO:0016020)" FT /inference="protein motif:HMMPanther:PTHR11101:SF1 FT PHOSPHATE TRANSPORTER-RELATED" FT /inference="protein motif:HMMPfam:PF01384 PHO4 FT InterPro:IPR001204 Phosphate transporter GO:Molecular FT Function:inorganic phosphate transporter activity FT (GO:0005315), Biological Process:phosphate transport FT (GO:0006817), Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32770.1" FT /translation="MEAVAIAMVAVAFYIAWNIGSNDSANAMGTAVGAGILSFRQATLT FT IAIFTLLGAYLKGYKVMKTVGKGIVPPGYLTVELAVIALLSAGVWVTIATVKGLPVSTT FT QAIVGGVLGVGLSIGAPVNWETMGKIAGAWVFSPVLSGIFAAILYKFYSRVVSSIKSIS FT TIEALYKALAILGGSYMAFNFGTNEVANASGPIVGAGFLEPRTAGILVALSLAMGSLTF FT SYAVMHTVGKKITALGPISAFAAQFGSAISVSLANVLGLPVSSSQAIVGGVVGVGLITG FT EGVDKRVIKDILFGWVATPTVAVLISLIVFRLFHLVGLV" FT gene complement(254496..255791) FT /gene="hflX" FT /locus_tag="TGAM_0269" FT /note="tg0269" FT CDS complement(254496..255791) FT /codon_start=1 FT /transl_table=11 FT /gene="hflX" FT /locus_tag="TGAM_0269" FT /product="GTP-binding protein hflx (hflX)" FT /db_xref="GOA:C5A3F9" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR016496" FT /db_xref="UniProtKB/TrEMBL:C5A3F9" FT /inference="protein motif:CDD:COG1084, Predicted GTPase FT [General function prediction only]" FT /inference="protein motif:CDD:COG1160, Predicted GTPases FT [General function prediction only]" FT /inference="protein motif:CDD:EngA1, EngA1 subfamily" FT /inference="protein motif:CDD:EngA2, EngA2 subfamily" FT /inference="protein motif:CDD:Era, Era subfamily" FT /inference="protein motif:CDD:Era, GTPase [General function FT prediction only]" FT /inference="protein motif:CDD:Era_like, Era (E" FT /inference="protein motif:CDD:FeoB, Fe2+ transport system FT protein B [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:FeoB, Ferrous iron transport FT protein B" FT /inference="protein motif:CDD:FeoB, Ferrous iron transport FT protein B (FeoB) subfamily" FT /inference="protein motif:CDD:GTP_translation_factor, GTP FT translation factor family" FT /inference="protein motif:CDD:HflX, GTPases [General FT function prediction only]" FT /inference="protein motif:CDD:HflX, HflX subfamily" FT /inference="protein motif:CDD:NOG, NOG1 is a nucleolar FT GTP-binding protein present in eukaryotes ranging from FT trypanosomes to humans" FT /inference="protein motif:CDD:Obg, Obg subfamily" FT /inference="protein motif:CDD:Obg, Predicted GTPase FT [General function prediction only]" FT /inference="protein motif:CDD:Obg_like, The Obg-like FT subfamily consists of five well-delimited, ancient FT subfamilies, namely Obg, DRG, YyaF/YchF, Ygr210, and NOG1" FT /inference="protein motif:CDD:Ras_like_GTPase, Ras-like FT GTPase superfamily" FT /inference="protein motif:CDD:ThdF, Predicted GTPase FT [General function prediction only]" FT /inference="protein motif:CDD:trmE, TrmE (MnmE, ThdF, MSS1) FT is a 3-domain protein found in bacteria and eukaryotes" FT /inference="protein motif:CDD:YihA_EngB, The YihA (EngB) FT subfamily" FT /inference="protein motif:COG:COG2262 GTPases; R General FT function prediction only" FT /inference="protein motif:FPrintScan:PR00326 GTP1OBG FT InterPro:IPR006073 GTP1/OBG GO:Molecular Function:GTP FT binding (GO:0005525)" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR10229 GTP-BINDING FT PROTEIN HFLX" FT /inference="protein motif:HMMPanther:PTHR10229:SF3 FT GTP-BINDING PROTEIN HFLX" FT /inference="protein motif:HMMPfam:PF01926 MMR_HSR1 FT InterPro:IPR002917 GTP-binding protein, HSR1-related FT GO:Molecular Function:GTP binding (GO:0005525), Cellular FT Component:intracellular (GO:0005622)" FT /inference="protein motif:HMMTigr:TIGR00231 small_GTP:small FT GTP-binding protein domain InterPro:IPR005225 Small FT GTP-binding protein domain GO:Molecular Function:GTP FT binding (GO:0005525)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /inference="protein motif:superfamily:SSF55261 Prokaryotic FT AspRS, insert domain" FT /protein_id="ACS32771.1" FT /translation="MRDMKAIGVIRYSRRERLSREEFEELLRSAGYEVLAVLEQNREEH FT PRYNIGRGKLEELKELVKELRPDKVIFANRLTPSQAYNLWKELRVEILDRWQLVLEIFE FT KRAHSKEAKLQVELASLQYEVPLVKEAIRRIKLGDRAGFKGMGEYQTQQYLKHIRYRMG FT KIRKELERVRADRGVKRKRREELGFLLIALAGYTNAGKSTLLNALAGESVEARDQMFTT FT LDTTTRRFKLGRKRVLLTDTVGFIDNLPPFIVEAFHSTLEEIVKADIVLLVIDASEPWA FT EVRRKLLASIEILRELKALDKPMVIVLNKIDLTNDEDVEEKRRRIMEIADELAPSVRAV FT VKTSAKLGILEELKRALEEIIPSLPKYRRFKILIPSTVDPGKVLGLLESIGEVLSVSYG FT DEVEVEGLVQVGMIKELTRLGIKLEHPSNEAH" FT gene 255880..256824 FT /locus_tag="TGAM_0270" FT /note="tg0270" FT CDS 255880..256824 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0270" FT /product="Hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3G0" FT /protein_id="ACS32772.1" FT /translation="MVKIKRSWLIIVLIFALLVGYGFSVYRELKTPEVYATYDLVVERY FT VSYLSWPEEEIKSGPFTFEFRGPEFIPYRDSRSVPVPLIFRVFTCQEPDDPQPVNYTID FT IWYTVYNGTSVPSFMTLSDVVPVGNISGEDVFMFFINYTLDDKGEAFQLGIAPKGGQVS FT FSRGDGTVWSLKDIGAFVDTDGFSGSSTCYLPESELPPLRYLGRITVVATDHRLPETVV FT AVLSVNGSRIVKGGRIGFLAVMRMGLRKRHLGISRWHGVPYLTTVDTRKTLTLCSYLGD FT DYPEPDGYIFAIPVSSYDISVDRSTSTNLFNRG" FT gene 256839..257816 FT /gene="kaeI" FT /locus_tag="TGAM_0271" FT /note="tg0271" FT CDS 256839..257816 FT /codon_start=1 FT /transl_table=11 FT /gene="kaeI" FT /locus_tag="TGAM_0271" FT /product="class I apurinic AP-endonuclease (AP-lyase) FT (KaeI)" FT /db_xref="GOA:C5A3G1" FT /db_xref="InterPro:IPR000905" FT /db_xref="InterPro:IPR017860" FT /db_xref="InterPro:IPR017861" FT /db_xref="InterPro:IPR022449" FT /db_xref="UniProtKB/Swiss-Prot:C5A3G1" FT /inference="protein motif:BlastProDom:PD002367 FT GCP_PYRHO_O57716; InterPro:IPR000905 Peptidase M22, FT glycoprotease GO:Biological Process:proteolysis FT (GO:0006508), Molecular Function:O-sialoglycoprotein FT endopeptidase activity (GO:0008450)" FT /inference="protein motif:CDD:Peptidase_M22, Glycoprotease FT family" FT /inference="protein motif:CDD:QRI7, Metal-dependent FT proteases with possible chaperone activity FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:COG:COG0533 Metal-dependent FT proteases with possible chaperone activity; O FT Posttranslational modification, protein turnover, FT chaperones" FT /inference="protein motif:FPrintScan:PR00789 OSIALOPTASE FT InterPro:IPR000905 Peptidase M22, glycoprotease FT GO:Biological Process:proteolysis (GO:0006508), Molecular FT Function:O-sialoglycoprotein endopeptidase activity FT (GO:0008450)" FT /inference="protein motif:Gene3D:G3D.3.40.47.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11735 FT O-SIALOGLYCOPROTEIN ENDOPEPTIDASE" FT /inference="protein motif:HMMPanther:PTHR11735:SF1 FT O-SIALOGLYCOPROTEIN ENDOPEPTIDASE" FT /inference="protein motif:HMMPfam:PF00814 Peptidase_M22 FT InterPro:IPR000905 Peptidase M22, glycoprotease FT GO:Biological Process:proteolysis (GO:0006508), Molecular FT Function:O-sialoglycoprotein endopeptidase activity FT (GO:0008450)" FT /inference="protein motif:HMMPIR:PIRSF004537 FT O-sialoglycoprotein endopeptidase InterPro:IPR009180 FT Peptidase M22, O-sialoglycoprotein endopeptidase FT GO:Molecular Function:zinc ion binding (GO:0008270), FT Molecular Function:O-sialoglycoprotein endopeptidase FT activity (GO:0008450)" FT /inference="protein motif:HMMTigr:TIGR00329 FT gcp:metalloendopeptidase, putative, glycopr FT InterPro:IPR000905 Peptidase M22, glycoprotease FT GO:Biological Process:proteolysis (GO:0006508), Molecular FT Function:O-sialoglycoprotein endopeptidase activity FT (GO:0008450)" FT /inference="protein motif:ScanRegExp:PS01016 GLYCOPROTEASE FT InterPro:IPR000905 Peptidase M22, glycoprotease FT GO:Biological Process:proteolysis (GO:0006508), Molecular FT Function:O-sialoglycoprotein endopeptidase activity FT (GO:0008450)" FT /inference="protein motif:superfamily:SSF53067 Actin-like FT ATPase domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32773.1" FT /translation="MIALGIEGTAHTLGIGIVTEKKVLANVFDTLTTEKGGIHPKEAAE FT HHARLLKPLLRKALQTAGITMEDVDVIAFSQGPGLGPALRVVATAARALAIKYNKPIVG FT VNHCIAHVEITKMFGVKDPVGLYVSGGNTQVLALEGGRYRVFGETLDIGIGNAIDTFAR FT ELGIGFPGGPKIEKLALKGERYIELPSAVKGMDLSFSGLLTEAVRKYRTGRYRVEDLAY FT SFQETAFSALVEVTERAVAHTGKNEVVLVGGVAANNRLREMLKIMAEDRGVEFFVPPYD FT LCRDNGAMIAYTGLRMYLGGVRFKISDTVVKQKFRTDEVDVTWS" FT gene 257807..258580 FT /locus_tag="TGAM_0272" FT /note="tg0272" FT CDS 257807..258580 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0272" FT /product="Conserved hypothetical protein" FT /note="Contains DUF835 domain; 3 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR008553" FT /db_xref="UniProtKB/TrEMBL:C5A3G2" FT /inference="protein motif:CDD:DUF835, Protein of unknown FT function (DUF835)" FT /inference="protein motif:HMMPfam:PF05763 DUF835 FT InterPro:IPR008553 Protein of unknown function DUF835" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32774.1" FT /translation="MELIVPLYEVVYDVVLLFAMAYIWFFFFRRWNRYTAELKPFIRNA FT AVFLGFAVVGRFVDLVGDFYRIPYLNAFLSFFYGTAIVGVIYTMIRYVLLLEESYLHFR FT LSSYSSHTKAAAELKGAYIALGSKSKFVDVMELIKSAKLPTLVFTRNPHLYQGMEFVVP FT VWVTQATDQGISPTKLHVIQEHALKFIRKNPNAIVLIDCLEYLLLYNDFAAVYKFLINL FT KDYLIPAGAALIVIVDESALDERQRALLLREFEPL" FT gene 258590..259069 FT /gene="coaD" FT /locus_tag="TGAM_0273" FT /note="tg0273" FT CDS 258590..259069 FT /codon_start=1 FT /transl_table=11 FT /gene="coaD" FT /locus_tag="TGAM_0273" FT /product="Phosphopantetheine adenylyltransferase (coaD)" FT /EC_number="2.7.7.3" FT /db_xref="GOA:C5A3G3" FT /db_xref="InterPro:IPR004820" FT /db_xref="InterPro:IPR004821" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR023540" FT /db_xref="UniProtKB/Swiss-Prot:C5A3G3" FT /inference="protein motif:CDD:COG1019, Predicted FT nucleotidyltransferase [General function prediction only]" FT /inference="protein motif:CDD:cytidylyltransferase_like, FT Cytidylyltransferase-like domain" FT /inference="protein motif:CDD:PPAT_CoAS, The PPAT domain of FT the bifunctional enzyme with PPAT and DPCK functions" FT /inference="protein motif:COG:COG1019 Predicted FT nucleotidyltransferase; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.620 no FT description" FT /inference="protein motif:HMMPfam:PF01467 CTP_transf_2 FT InterPro:IPR004820 Cytidylyltransferase GO:Biological FT Process:biosynthesis (GO:0009058), Molecular FT Function:nucleotidyltransferase activity (GO:0016779)" FT /inference="protein motif:HMMTigr:TIGR00125 FT cyt_tran_rel:cytidyltransferase-related InterPro:IPR004821 FT Cytidyltransferase-related" FT /inference="protein motif:superfamily:SSF52374 FT Nucleotidylyl transferase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32775.1" FT /translation="MRKPYRKVVVGGTFDRLHLGHKALLRKAFEVGRYVYVGLTSDEMI FT RNKPYAEKILPYELRLMDLLKFFEVNGYTNYRIIKINTAIGFADRIKSLEAIVVSEETY FT KGALLVNRAREERGLKPLEIVTIKLVKSRIGPKISSTLIRAGLIDPFGNPLKKDN" FT gene complement(259066..259818) FT /locus_tag="TGAM_0274" FT /note="tg0274" FT CDS complement(259066..259818) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0274" FT /product="NIF3 (NGG1p interacting factor 3)-like protein" FT /db_xref="InterPro:IPR002678" FT /db_xref="UniProtKB/TrEMBL:C5A3G4" FT /inference="protein motif:CDD:COG0327, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:NIF3, NIF3 (NGG1p interacting FT factor 3)" FT /inference="protein motif:COG:COG0327 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPanther:PTHR13799 FT NGG1-INTERACTING FACTOR" FT /inference="protein motif:HMMPanther:PTHR13799:SF7 NGG1 FT INTERACTING FACTOR-RELATED" FT /inference="protein motif:HMMPfam:PF01784 NIF3 FT InterPro:IPR002678 NGG1p interacting factor 3, NIF3" FT /inference="protein motif:HMMTigr:TIGR00486 FT TIGR00486:conserved hypothetical protein T FT InterPro:IPR002678 NGG1p interacting factor 3, NIF3" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32776.1" FT /translation="MNRDELVAFLDEYLQISAYPDKSSNGLQVEGKEEVNRVAFAVDTT FT LRTIERAVNGKADMLVVHHGMIWGGLNYITGIHYKRLKALIENGLNLYVAHLPLDAHPE FT VGNNVGLLRLLDLEPKGPFGEYKSLSIGFYGEFEEPQPIEKVAQIIAEKLDTTVRTYEF FT GRRVIKTVGAISGAGAFALEEAYRKGIDLLITGEFGHADYLTAIDLPQSVLVAGHYKTE FT TLGVKALMELIRERFGLDVFFIDEPTGL" FT gene complement(259815..261215) FT /locus_tag="TGAM_0275" FT /note="tg0275" FT CDS complement(259815..261215) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0275" FT /product="Prokaryotic ATPase, AAA superfamily" FT /note="Contains Archaeal ATPase domain (PF01637)" FT /db_xref="GOA:C5A3G5" FT /db_xref="InterPro:IPR004256" FT /db_xref="InterPro:IPR011579" FT /db_xref="UniProtKB/TrEMBL:C5A3G5" FT /inference="protein motif:CDD:Arch_ATPase, Archaeal ATPase" FT /inference="protein motif:CDD:COG1672, Predicted ATPase FT (AAA+ superfamily) [General function prediction only]" FT /inference="protein motif:CDD:DUF234, Archaea bacterial FT proteins of unknown function" FT /inference="protein motif:COG:COG1672 Predicted ATPase FT (AAA+ superfamily); R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPfam:PF01637 Arch_ATPase FT InterPro:IPR011579 Prokaryotic ATPase" FT /inference="protein motif:HMMPfam:PF03008 DUF234 FT InterPro:IPR004256 Protein of unknown function DUF234, FT DEXX-box ATPase C-terminal GO:Molecular Function:molecular FT function unknown (GO:0005554)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /inference="protein motif:superfamily:SSF52980 Restriction FT endonuclease-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32777.1" FT /translation="MRFINREREMELLLKAKERSRRKLYSVAIYGLRRVGKTRLLREFL FT SENDLYFFVNRGKSSALLLREYSEILRGKGILSKREELKSWDDFFEVLFERFTGAVAFD FT EFQDFRFVEPSVYSTLQRFMDENEEKPMLLIFTGSTIGMVERLFKDSKEPLYGRIKREL FT RLEPLDIRGSYEMAREVGIENLDDFITLYSVFGGFPRYWVAVEDEGLEGENAERILKEL FT IFSYSAPLEEEVPRILSLEFGKRSGVYYDILEAIANGSTSPSEIAGYLNRKETSITRQL FT HELVNYFKLVDYDRAVLGKGSVLYIRHPFLNFWFRFVQPRLSEYELNRERLWEDVKRNL FT PDYVGKRFDFACRELLRLSGNFLPFQPTVIGRHWGRYREGGKRKVYEIDIIALDSEGRK FT AIFGECKWRKRTQNAEKLLEKLRGKVELTGWRGEVYYLLIARKLRNVPENVIALDEKGI FT KNLLEGEK" FT gene 261308..263077 FT /locus_tag="TGAM_0276" FT /note="tg0276" FT CDS 261308..263077 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0276" FT /product="Histone acetyltransferase-like protein" FT /EC_number="2.3.1.48" FT /note="Contains Elp3 (Elongator protein 3), belongs to GNAT FT methyltransferases family" FT /db_xref="GOA:C5A3G6" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR005910" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR016181" FT /db_xref="InterPro:IPR023404" FT /db_xref="UniProtKB/TrEMBL:C5A3G6" FT /inference="protein motif:COG:COG1243 Histone FT acetyltransferase; K Transcription" FT /inference="protein motif:Gene3D:G3D.3.40.630.30 no FT description" FT /inference="protein motif:HMMPanther:PTHR11135 HISTONE FT ACETYLTRANSFERASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11135:SF1 HISTONE FT ACETYLTRANSFERASE-RELATED" FT /inference="protein motif:HMMPfam:PF00583 Acetyltransf_1 FT InterPro:IPR000182 GCN5-related N-acetyltransferase" FT /inference="protein motif:HMMPfam:PF04055 Radical_SAM FT InterPro:IPR007197 Radical SAM" FT /inference="protein motif:HMMSmart:SM00729 no description FT InterPro:IPR006638 Elongator protein 3/MiaB/NifB" FT /inference="protein motif:HMMTigr:TIGR01211 ELP3:histone FT acetyltransferase, ELP3 family InterPro:IPR005910 Histone FT acetyltransferase ELP3" FT /inference="protein motif:superfamily:SSF47917 C-terminal FT domain of alpha and beta subunits of F1 ATP synthase FT InterPro:IPR000793 ATPase, F1/V1/A1 complex, alpha/beta FT subunit, C-terminal" FT /inference="protein motif:superfamily:SSF55729 Acyl-CoA FT N-acyltransferases (Nat)" FT /protein_id="ACS32778.1" FT /translation="MEEFEKAVNELARLVMSGEIKSRDELNRWKIKVARKYHLSKIPGN FT SDILKAIPEERREEFRELLKRKPTRTISGVAVVAMMTKPFPCPHGRCIYCPGGPSVGSP FT QSYTGREPSALRAIQSAYHPYIIMMRRLKQLTDIGHDVDKVEVIIQGGTFPAVDLDYQE FT WFVKCAFKAMNDFPYFKDIENLEEKLIRLIVKKDESVFEEDPKFREAWQKTHSKPYYYL FT EDEQRKNEKAKVRMVGLTIETRPDWAFERHIDRMLKLGTTRVELGVQTIFNFIHERTKR FT GHGVEEIVKATQLLRDAGLKINYHIMPGLPGSNFERDLYTFRTIFEDPRFRPDMLKIYP FT TLVTKDAPLYRWWKEGKYRPYRTEEAVELLVEAYKLFPKWVRVMRIQRDIPVQLIVDGV FT KHSNLGQLVFNELIKRGIRPREIRFREVGHMMEKFGIQPEVEHIKLLREDYDAAGGREI FT FLSFEDVKNDILIGFLRLRIPSENAHRKEINCCPSAIVRELHVYGPLVPIGGKPRYEWQ FT HRGYGRELLAEAERIAREEFEVKKMLVISGVGVREYYRKFGYRKNGPYVAKRLDKGYAE FT YKKSREFDAHLNT" FT gene 263126..263689 FT /locus_tag="TGAM_0277" FT /note="tg0277" FT CDS 263126..263689 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0277" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3G7" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32779.1" FT /translation="MRLGRKLSYEERSSIKIVLVFSVVFLGILGAILYPLLHKEVVFEV FT SVPKGQPLMASNMSIDGVSYKNAIAFGAFYNPFILHCSEMTPANVTIRLTTPGWCVDLW FT VWGGIERGWILKVNCSDTVSLDYYSFYQRGARESGELYWYLTEGNVLVFHKRTEVNNYE FT MVNFTVSYLGRKDVGYFLVSLGKG" FT gene 263695..264222 FT /locus_tag="TGAM_0278" FT /note="tg0278" FT CDS 263695..264222 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0278" FT /product="Conserved hypothetical protein" FT /note="UPF0153 family" FT /db_xref="InterPro:IPR005358" FT /db_xref="UniProtKB/TrEMBL:C5A3G8" FT /inference="protein motif:CDD:COG0727, Predicted FT Fe-S-cluster oxidoreductase [General function prediction FT only]" FT /inference="protein motif:CDD:UPF0153, Uncharacterised FT protein family (UPF0153)" FT /inference="protein motif:COG:COG0727 Predicted FT Fe-S-cluster oxidoreductase; R General function prediction FT only" FT /inference="protein motif:HMMPfam:PF03692 UPF0153 FT InterPro:IPR005358 Protein of unknown function UPF0153 FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /protein_id="ACS32780.1" FT /translation="MRFKPKPFTEPVGFRCLYCLDCCRGRHVYLTLKDVERIAKAGHDP FT QDFVTFSIEGDKIRFVLAIREWDLGCVFHDPETGKCRIHAVRPLICRIYPFMVSRKPLG FT VKSERPFHHKGETLWLYYDESCPGINAENPETTITPEEIAELGIEFEREFEKTDMDGFA FT ELIERLEGEKDE" FT gene 264215..264718 FT /locus_tag="TGAM_0279" FT /note="tg0279" FT CDS 264215..264718 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0279" FT /product="Ribosome subunit biogenesis protein, putative" FT /note="Belongs to UPF0113 family" FT /db_xref="InterPro:IPR005155" FT /db_xref="UniProtKB/TrEMBL:C5A3G9" FT /inference="protein motif:CDD:NIP7, Protein involved in FT ribosomal biogenesis, contains PUA domain [Translation, FT ribosomal structure and biogenesis]" FT /inference="protein motif:CDD:UPF0113, Uncharacterised FT protein family (UPF0113)" FT /inference="protein motif:COG:COG1374 Protein involved in FT ribosomal biogenesis, contains PUA domain; J Translation, FT ribosomal structure and biogenesis" FT /inference="protein motif:HMMPfam:PF03657 UPF0113 FT InterPro:IPR005155 Protein of unknown function UPF0113" FT /protein_id="ACS32781.1" FT /translation="MSETLRYRRASAWEYDLILREAEKYGELKHHFFAVVEGKFRDVYA FT VNERVWAEIEKFRVKPYAYGTFVGTIKVDNLVEKFYPNVEFFYFVNVEKNYAVLSPKAG FT FLFTTGKDVPRSGVRKYVWQGTKKLVIYDENGVILGIGRINAESRKKFILNVTDVGEFL FT RRKR" FT gene 264802..265548 FT /locus_tag="TGAM_0280" FT /note="tg0280" FT CDS 264802..265548 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0280" FT /product="RecA-superfamily ATPase, Rad55-like protein" FT /note="Contains 1 P_Loop (SSF52540) domain, 1 Kaic FT (PF06745) domain" FT /db_xref="GOA:C5A3H0" FT /db_xref="InterPro:IPR004504" FT /db_xref="InterPro:IPR010624" FT /db_xref="InterPro:IPR014774" FT /db_xref="InterPro:IPR022475" FT /db_xref="UniProtKB/TrEMBL:C5A3H0" FT /inference="protein motif:CDD:FlaH, Predicted ATPases FT involved in biogenesis of archaeal flagella [Cell motility FT and secretion / Intracellular trafficking and secretion]" FT /inference="protein motif:CDD:KaiC, KaiC" FT /inference="protein motif:CDD:KaiC, KaiC is a circadian FT clock protein primarily found in cyanobacteria KaiC is a FT RecA-like ATPase, having both Walker A and Walker B motifs" FT /inference="protein motif:CDD:RAD55, RecA-superfamily FT ATPases implicated in signal transduction [Signal FT transduction mechanisms]" FT /inference="protein motif:COG:COG0467 RecA-superfamily FT ATPases implicated in signal transduction; T Signal FT transduction mechanisms" FT /inference="protein motif:FPrintScan:PR01874 DNAREPAIRADA FT InterPro:IPR004504 DNA repair protein RadA GO:Molecular FT Function:damaged DNA binding (GO:0003684), Molecular FT Function:ATP binding (GO:0005524), Biological Process:DNA FT repair (GO:0006281)" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPfam:PF06745 KaiC FT InterPro:IPR010624 Circadian clock protein KaiC" FT /inference="protein motif:ProfileScan:PS51146 KAIC FT InterPro:IPR010624 Circadian clock protein KaiC" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32782.1" FT /translation="MIRKVKTGIPGMDEILHGGIPERNVVLLSGGPGTGKTIFSQQFLW FT NGLGMGEPGIYVALEEHPVQVRQNMAQFGWDVRKYEEEGLFAMVDAFTAGIGKSKEYEK FT YIVHDLTDIREFIDVLRTAVKDIGAKRVVIDSVTTLYINKPAMARSIVMQLKRVLAGLG FT VTSILVSQISVGERGFGGPGVEHGVDGIIRLDLDEIDGELKRSLIVWKMRGTSHSMRRH FT PFEITDKGIVVYPDKVLKRKAIVEIE" FT gene 265572..266117 FT /locus_tag="TGAM_0281" FT /note="tg0281" FT CDS 265572..266117 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0281" FT /product="Conserved hypothetical protein, predicted FT transcriptional regulator" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR013249" FT /db_xref="InterPro:IPR022285" FT /db_xref="UniProtKB/TrEMBL:C5A3H1" FT /inference="protein motif:CDD:COG1318, Predicted FT transcriptional regulators [Transcription]" FT /inference="protein motif:COG:COG1318 Predicted FT transcriptional regulators; K Transcription" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:Gene3D:G3D.1.10.287.40 no FT description" FT /inference="protein motif:HMMPfam:PF08281 Sigma70_r4_2 FT InterPro:IPR013249 Sigma-70, region 4 type 2" FT /inference="protein motif:superfamily:SSF46955 Putative FT DNA-binding domain InterPro:IPR009061 Putative DNA binding" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32783.1" FT /translation="MEVPLNPVGREEIHRLESILLFATLFRPEVIELIKDPAERLTWVD FT SLAVAAGAIAREKAGMTVREIAEELGRTEATVRKHLKGETKAGQLVRETYELIKQGKLD FT ELVRNVEVLAKGGQLVALEEYEKLKKEKEELEAKVKELEEKVKGLEAENRELKAKLENV FT RKILGDTLERIREIEKLL" FT gene complement(266119..266550) FT /gene="speH" FT /locus_tag="TGAM_0282" FT /note="tg0282" FT CDS complement(266119..266550) FT /codon_start=1 FT /transl_table=11 FT /gene="speH" FT /locus_tag="TGAM_0282" FT /product="S-adenosylmethionine decarboxylase proenzyme FT (speH)" FT /EC_number="4.1.1.50" FT /db_xref="GOA:C5A3H2" FT /db_xref="InterPro:IPR003826" FT /db_xref="InterPro:IPR016067" FT /db_xref="InterPro:IPR017716" FT /db_xref="UniProtKB/Swiss-Prot:C5A3H2" FT /inference="protein motif:CDD:AdoMet_dc, FT S-adenosylmethionine decarboxylase" FT /inference="protein motif:COG:COG1586 S-adenosylmethionine FT decarboxylase; E Amino acid transport and metabolism" FT /inference="protein motif:HMMPfam:PF02675 AdoMet_dc FT InterPro:IPR003826 S-adenosylmethionine decarboxylase FT related" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32784.1" FT /translation="MSEIETIGFHYVVEAAGCDPEILGNADRIREIFLEAAKVGNMEVK FT SSYFFKFSPTGVSGVVIVAESHISVHTWPEKGYAALDVYTCGTKAEPEKAVDYILEKFR FT AKYAHVSEIKRGIEEDDDTFTHMIMTWEESLRKNGNGKG" FT gene 266874..267821 FT /gene="secDF" FT /locus_tag="TGAM_0283" FT /note="tg0283" FT CDS 266874..267821 FT /codon_start=1 FT /transl_table=11 FT /gene="secDF" FT /locus_tag="TGAM_0283" FT /product="Protein export membrane protein, SecD/SecF family FT (secDF)" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3H3" FT /db_xref="InterPro:IPR022813" FT /db_xref="InterPro:IPR024921" FT /db_xref="UniProtKB/Swiss-Prot:C5A3H3" FT /inference="protein motif:CDD:COG1033, Predicted exporters FT of the RND superfamily [General function prediction only]" FT /inference="protein motif:CDD:SecD, Preprotein translocase FT subunit SecD [Intracellular trafficking and secretion]" FT /inference="protein motif:CDD:SecD_SecF, Protein export FT membrane protein" FT /inference="protein motif:CDD:SecF, Preprotein translocase FT subunit SecF [Intracellular trafficking and secretion]" FT /inference="protein motif:COG:COG0341 Preprotein FT translocase subunit SecF; U Intracellular trafficking, FT secretion, and vesicular transport" FT /inference="protein motif:HMMPfam:PF02355 SecD_SecF FT InterPro:IPR003335 SecD/SecF/SecDF export membrane protein FT GO:Molecular Function:protein transporter activity FT (GO:0008565), Cellular Component:type II protein secretion FT system complex (GO:0015627), Biological Process:type II FT protein secretion system (GO:0015628)" FT /inference="protein motif:superfamily:SSF82866 Multidrug FT efflux transporter AcrB transmembrane domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32785.1" FT /translation="MGTKKQKTKKKPSDEILETKRKRLSFLVRMEPRKMVLYPLVVFLV FT AALILAVHFPEKGIDLKGGVVVTVYHVSASPDELASYVKEKTGIDVRAEEFKDPITGLS FT GIRIYAPAKTAPSKIADEISNAIRLKYKDADVTPRVVDPTFGKIAQKQGIKAVIYAFIG FT MAIVVFLFFRDPVPSGTIIFSAFSDMVIALATMGILGIELTTATIAALLMLIGYTVDSN FT ILLTTRLLRRKEDTIEDAYLSAVSTGFTMSTTTLGALFILWLVSTSEVIDSITIVLIFG FT LLADFMNTWIFNAGVLRWYIASPLKFSIKLRRGK" FT gene 267821..269398 FT /gene="secD" FT /locus_tag="TGAM_0284" FT /note="tg0284" FT CDS 267821..269398 FT /codon_start=1 FT /transl_table=11 FT /gene="secD" FT /locus_tag="TGAM_0284" FT /product="Protein-export membrane protein (secD)" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3H4" FT /db_xref="InterPro:IPR022813" FT /db_xref="InterPro:IPR024912" FT /db_xref="UniProtKB/Swiss-Prot:C5A3H4" FT /inference="protein motif:CDD:SecD, Preprotein translocase FT subunit SecD [Intracellular trafficking and secretion]" FT /inference="protein motif:CDD:SecD_SecF, Protein export FT membrane protein" FT /inference="protein motif:CDD:SecF, Preprotein translocase FT subunit SecF [Intracellular trafficking and secretion]" FT /inference="protein motif:COG:COG0342 Preprotein FT translocase subunit SecD; U Intracellular trafficking, FT secretion, and vesicular transport" FT /inference="protein motif:HMMPfam:PF02355 SecD_SecF FT InterPro:IPR003335 SecD/SecF/SecDF export membrane protein FT GO:Molecular Function:protein transporter activity FT (GO:0008565), Cellular Component:type II protein secretion FT system complex (GO:0015627), Biological Process:type II FT protein secretion system (GO:0015628)" FT /inference="protein motif:ScanRegExp:PS00217 FT SUGAR_TRANSPORT_2 InterPro:IPR005829 Sugar transporter FT superfamily GO:Molecular Function:transporter activity FT (GO:0005215), Biological Process:transport (GO:0006810), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:superfamily:SSF82866 Multidrug FT efflux transporter AcrB transmembrane domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32786.1" FT /translation="MARKKGVKALLLNWRVLLLILFLIGSVVSMSIKGLTYGIDIGGGV FT ALIAEPEKPVSKDTLNGIITSLQNRLNTFGVKDITIEAQHDPETGQSLIVVKIANVTLD FT EANQIKDLIESQGVLYMEFNGVIFATGTDVTVHSSDYGLDLQECPTCWYVGFELSGKAQ FT NKFKKIAAGKLGWPIDIYLDPPVNSLLVVSPRVYQEMNSGDFMGAPSEGTPKPLVERLK FT EAFNITVVEYSNQTAEDIVENATALGKDKIILADVPEELYNDVRELVLSKDLKLRVSHY FT TPQQGEDLKDFVKRILNLYGPYVLKFDPAKGETTRLKLSGSAPTKEEALQEARKIYSVL FT RSGSLAVKLHVVSEEYISPTLGASFKKQAIIAGIGALIAVLLIVYFHYRRWRIAIPVAS FT TSLFEVIIILGIAALIRWNLDLPSIAGIIAAIGTGVDQQIVITDELLGGTAGRVTRRMS FT ALRRMARAFFIIFASAATTIVAMSFLLVYFVGTLKGFAVTTILGVLIGVLVTRPAYAEI FT AKYLLSLE" FT gene 269441..270127 FT /gene="trkA" FT /locus_tag="TGAM_0285" FT /note="tg0285" FT CDS 269441..270127 FT /codon_start=1 FT /transl_table=11 FT /gene="trkA" FT /locus_tag="TGAM_0285" FT /product="Trk system potassium uptake protein trkA-like FT protein (trkA)" FT /db_xref="GOA:C5A3H5" FT /db_xref="InterPro:IPR003148" FT /db_xref="InterPro:IPR006036" FT /db_xref="InterPro:IPR006037" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A3H5" FT /inference="protein motif:CDD:TrkA, K+ transport systems, FT NAD-binding component [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:TrkA_N, TrkA-N domain" FT /inference="protein motif:COG:COG0569 K+ transport systems, FT NAD-binding component; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:FPrintScan:PR00335 KUPTAKETRKA FT InterPro:IPR006036 TrkA potassium uptake protein FT GO:Biological Process:potassium ion transport (GO:0006813), FT Molecular Function:cation transporter activity FT (GO:0008324)" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPfam:PF02080 TrkA_C FT InterPro:IPR006037 TrkA-C GO:Biological Process:potassium FT ion transport (GO:0006813), Molecular Function:cation FT transporter activity (GO:0008324)" FT /inference="protein motif:HMMPfam:PF02254 TrkA_N FT InterPro:IPR003148 TrkA-N GO:Biological Process:potassium FT ion transport (GO:0006813)" FT /inference="protein motif:ProfileScan:PS50205 NAD_BINDING FT InterPro:IPR000205 NAD-binding site" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32787.1" FT /translation="MFVVIMGAGRVGYLVAKMLEEDGHDVTVIELDRRRAQDLSLEING FT LVIMGDATDPKTLEEANIKQAHAFAALTGKDDANILACILAKNLNPNVYTALRISNPKN FT KRIFERVEDLKKYFNFIISPEEIAAEYISRNISTPGFDRVLFPREGAEIVRFEITPQSW FT VAGKTVRELNLPKDALIVAVYDKKGNLIIPSGDTKLPEEGSLIVFAKTGALDEVKELFE FT RVGKKD" FT gene complement(269849..271462) FT /gene="acdA-2" FT /locus_tag="TGAM_0286" FT /note="tg0286" FT CDS complement(269849..271462) FT /codon_start=1 FT /transl_table=11 FT /gene="acdA-2" FT /locus_tag="TGAM_0286" FT /product="Acetyl-CoA synthetase (ADP forming), alpha chain FT (acdA)" FT /EC_number="6.2.1.13" FT /db_xref="GOA:C5A3H6" FT /db_xref="InterPro:IPR003781" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR016102" FT /db_xref="UniProtKB/TrEMBL:C5A3H6" FT /inference="protein motif:CDD:CoA_binding, CoA binding FT domain" FT /inference="protein motif:CDD:COG1042, Acyl-CoA synthetase FT (NDP forming) [Energy production and conversion]" FT /inference="protein motif:CDD:SucD, Succinyl-CoA FT synthetase, alpha subunit [Energy production and FT conversion]" FT /inference="protein motif:COG:COG1042 Acyl-CoA synthetase FT (NDP forming); C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.261 no FT description" FT /inference="protein motif:HMMPanther:PTHR11117 SUCCINYL-COA FT SYNTHETASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11117:SF2 FT SUCCINYL-COA SYNTHETASE InterPro:IPR005810 Succinyl-CoA FT ligase, alpha subunit GO:Molecular Function:catalytic FT activity (GO:0003824), Biological Process:metabolism FT (GO:0008152)" FT /inference="protein motif:HMMPfam:PF02629 CoA_binding FT InterPro:IPR003781 CoA-binding" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /inference="protein motif:superfamily:SSF52210 Succinyl-CoA FT synthetase domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32788.1" FT /translation="MSLDFFFYPRGVAVFGSFRKGAIAYEILRNIVEGGFEGKIIPVNP FT KGGSVEVAGRVFEIRERLDEPVDTAIIAIPAKFVPGLIDEIGPRIKGAVVISAGFSEVG FT NADLERELVEKARKHGVRLIGPNCAGIFGVHGKFFGSFEVRVKPGGLALISQSGAFGGA FT ALAMGNEEGIGFSAFVSYGNAADLNESDFLEYFADDENTKAIALYIEGVKDGRHFLKAL FT SYASKRKPVIVLKAGKSASGAKAAASHTGSLAGSYEIYRAAFKQAGAIEVEEMEELFDA FT AKAFEMYSMAGKRVAVITNSGGPGVLATDKLERLGLEIAKLSEDTVAKLQSFLPEQCST FT RNPIDLIADADYERYKRTIEIVCRDGNVDSILVICVPPIFIPSEEIAKAVIEADCDKPV FT IVNFMAGELVRDGVKLLEEHSIKNFPTPERAARALAWLAMRKKRGGLILFPHPLKELFH FT LVKGPGFGKNYERTFLGKLGIAGGYYEVALFVVDGNDESILWEVEFPDGFPSDPALGSY FT LKANYLGPFPREKNPVKTGG" FT gene complement(271459..272466) FT /locus_tag="TGAM_0287" FT /note="tg0287" FT CDS complement(271459..272466) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0287" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3H7" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32789.1" FT /translation="MGQIQGPTMSVRRGTALILALVLLGAAWTQPVRGKSEQNVFDMVM FT LIQVNPDGSAHFDISARLTNPAYRELVKNETDFTKLVEELVYRNLVEDLHERYGNFTVY FT LPSSGPVEITANWSARVNFYIVPFLTKGKRGLECPYSGPLDFVSGGKVYSFEFRRIILV FT LPRNWTVLYTFPSPADRAKNVLIWENADYLPMIGVSTGSPGEGTSKPLSCNPLRIELHY FT SPEEGKVFFNATYMCEAGLPALPGARNVTYIKRGNVTEVRGYFVPRLEYDEGLFRREWR FT AEIELPEEFPQVVGGSRGKNGSIVITVERSSAGIQTAVPVIFIAVIIALWRWKR" FT gene 272530..273366 FT /gene="ppnK" FT /locus_tag="TGAM_0288" FT /note="tg0288" FT CDS 272530..273366 FT /codon_start=1 FT /transl_table=11 FT /gene="ppnK" FT /locus_tag="TGAM_0288" FT /product="Inorganic polyphosphate/ATP-NAD kinase FT (poly(P)/ATP NAD kinase) (ppnK)" FT /EC_number="2.7.1.23" FT /db_xref="GOA:C5A3H8" FT /db_xref="InterPro:IPR002504" FT /db_xref="InterPro:IPR016064" FT /db_xref="InterPro:IPR017437" FT /db_xref="InterPro:IPR017438" FT /db_xref="UniProtKB/Swiss-Prot:C5A3H8" FT /inference="protein motif:CDD:COG0061, Predicted sugar FT kinase [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:NAD_kinase, ATP-NAD kinase" FT /inference="protein motif:COG:COG0061 Predicted sugar FT kinase; G Carbohydrate transport and metabolism" FT /inference="protein motif:HMMPanther:PTHR20275 FAMILY NOT FT NAMED" FT /inference="protein motif:HMMPanther:PTHR20275:SF1 FT UNCHARACTERIZED" FT /inference="protein motif:HMMPfam:PF01513 NAD_kinase FT InterPro:IPR002504 ATP-NAD/AcoX kinase GO:Molecular FT Function:NAD+ kinase activity (GO:0003951), Biological FT Process:metabolism (GO:0008152)" FT /inference="protein motif:superfamily:SSF52317 Class I FT glutamine amidotransferase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32790.1" FT /translation="MRFGIVARRDREAALKLAYRVYDFLKVSGYDVLVDRETFENLPEF FT EEGDVVPLEEFDVDFIIAIGGDGTILRIEHKTKKDFPILGINMGTLGFLTEVEPHETFF FT ALSRLLEGDYWIDERMKLRTYLNGENSVPDALNEDAILTGVPGKIVHLKYYVDGGLADE FT VRSDGVIVSTPTGSTGYALSAGGPFVDPRLELFVIAPINPIALSSRPMVVPSSSEIEIV FT PLPPERGLILTVDGQFYTHLSPDTEIKIKKSPRKARFVRFSHEIYPRYPFRLKKRF" FT gene complement(273363..274370) FT /locus_tag="TGAM_0289" FT /note="tg0289" FT CDS complement(273363..274370) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0289" FT /product="Conserved hypothetical protein" FT /note="Belongs to UPF0104 family; 8 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR005242" FT /db_xref="InterPro:IPR022791" FT /db_xref="UniProtKB/TrEMBL:C5A3H9" FT /inference="protein motif:CDD:COG0392, Predicted integral FT membrane protein [Function unknown]" FT /inference="protein motif:CDD:UPF0104, Uncharacterised FT protein family (UPF0104)" FT /inference="protein motif:COG:COG0392 Predicted integral FT membrane protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF03706 UPF0104 FT InterPro:IPR005242 Conserved hypothetical protein 374" FT /inference="protein motif:HMMTigr:TIGR00374 FT TIGR00374:conserved hypothetical protein InterPro:IPR005242 FT Conserved hypothetical protein 374" FT /protein_id="ACS32791.1" FT /translation="MNWKKILPFVASVLVIIALVWWAGTEGVLRVLGRTNVYYLLIAVL FT MYFGGIVTWAMRWHVIIKGLGIEVRFRDTLAALFIGVLFNNLTPGARGGGEAFRVYYLV FT KRSKGSYGQLFATVTADRILDLIPVMTMLLMAAVYVYSLGFTGLFAVILFLTLMLAGLT FT GLTTLIITSERRVRRILYMIFNLLARLIPSRIKKHEEKFNCLVDTNIPHFTEGLRVVVR FT DRKTFILSTFYSFLTWIFVVLRNYLVFLSLGYKIGLLAVVTVQMIATTVGIISVIPGGA FT GIIEAVTSGVYVALGVTREMAVTSSILDRMISFWLPLVLGAIIVTHLGLKPKES" FT gene complement(274374..275543) FT /locus_tag="TGAM_0290" FT /note="tg0290" FT CDS complement(274374..275543) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0290" FT /product="tRNA/rRNA cytosine-C5-methylase, putative" FT /note="Belongs to Sun/NOL1/NOP family. Contains 1 PUA FT domain and 1 SAM binding domain" FT /db_xref="GOA:C5A3I0" FT /db_xref="InterPro:IPR001678" FT /db_xref="InterPro:IPR002478" FT /db_xref="InterPro:IPR004521" FT /db_xref="InterPro:IPR011023" FT /db_xref="InterPro:IPR015947" FT /db_xref="InterPro:IPR023267" FT /db_xref="UniProtKB/TrEMBL:C5A3I0" FT /inference="protein motif:BlastProDom:PD005242 FT Q9UXT4_PYRAB_Q9UXT4; InterPro:IPR006174 rRNA subunit FT methyltransferase" FT /inference="protein motif:CDD:COG2016, Predicted FT RNA-binding protein (contains PUA domain) [Translation, FT ribosomal structure and biogenesis]" FT /inference="protein motif:CDD:Nol1_Nop2_Sun, NOL1/NOP2/sun FT family" FT /inference="protein motif:CDD:PUA, PUA domain" FT /inference="protein motif:CDD:PUA, Putative RNA-binding FT Domain in PseudoUridine synthase and Archaeosine FT transglycosylase" FT /inference="protein motif:CDD:Sun, tRNA and rRNA FT cytosine-C5-methylases [Translation, ribosomal structure FT and biogenesis]" FT /inference="protein motif:COG:COG0144 tRNA and rRNA FT cytosine-C5-methylases; J Translation, ribosomal structure FT and biogenesis" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR11078 FT NOL1/NOP2/FMU(SUN) FAMILY/METHYLTRANSFERASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11078:SF1 FT NOL1/NOP2/FMU(SUN) FAMILY" FT /inference="protein motif:HMMPfam:PF01189 Nol1_Nop2_Fmu FT InterPro:IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar FT NOL1/Nop2p" FT /inference="protein motif:HMMPfam:PF01472 PUA FT InterPro:IPR002478 PUA GO:Molecular Function:RNA binding FT (GO:0003723)" FT /inference="protein motif:HMMSmart:SM00359 no description FT InterPro:IPR002478 PUA GO:Molecular Function:RNA binding FT (GO:0003723)" FT /inference="protein motif:HMMTigr:TIGR00446 FT nop2p:NOL1/NOP2/sun family putative RNA met FT InterPro:IPR011023 Nop2p" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:ProfileScan:PS50890 PUA FT InterPro:IPR002478 PUA GO:Molecular Function:RNA binding FT (GO:0003723)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /inference="protein motif:superfamily:SSF88697 PUA FT domain-like" FT /protein_id="ACS32792.1" FT /translation="MEGNGKSSTFEAFPAELREYYRELFGSEAEEIMASLRTPVEKYYI FT RVNTLKTSRDKLMRILRREGLKPKRSPYLKEGIYFEREGPNFPDDYEPGVKVVRANKFA FT SESVYQGANLYAPGVLQADKSIRPGDEVEIRDPRGLLVGIGIAKMSAKEMVVSMRGLAV FT EVTLPKFRLPSLSELQSFKEGLFYAQSLPSMVVAHVLEPSEEELIIDMAAAPGGKTSHI FT AQLLQNRGEIIAIDKSRNRLRKMEEELKRLGVKNVRLIRMDARKLPELGLQADKILLDA FT PCTALGIRPKLWESRTPKDIIATARYQRAFIWAAIKSLRRGGVLVYSTCTLSYEENEAN FT VKFMLEKGLKLEEQAVFIGSEGIGLENVQRFYPNRHLTQGFFIAKLRKV" FT gene complement(275512..276030) FT /locus_tag="TGAM_0291" FT /note="tg0291" FT CDS complement(275512..276030) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0291" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR024505" FT /db_xref="UniProtKB/TrEMBL:C5A3I1" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32793.1" FT /translation="MKVKEIHEFLNRLWDDIFTLNDELKAELTGKGFKVEDVEEVFGAY FT IFLDGEWVRMDYPHPAFEIKPQIEVGATPESYYFVVAVPKERISEGFLSLFLELFPRSF FT IYGSENFLSDVYNWRRDGRVSPREVLERIEGSEEKVFQFEANFGSVEALKKGLERLIDV FT GREWEIFDL" FT gene complement(276077..276991) FT /locus_tag="TGAM_0292" FT /note="tg0292" FT CDS complement(276077..276991) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0292" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="InterPro:IPR004864" FT /db_xref="InterPro:IPR013783" FT /db_xref="UniProtKB/TrEMBL:C5A3I2" FT /inference="protein motif:CDD:COG5608, Conserved secreted FT protein [Function unknown]" FT /inference="protein motif:CDD:DUF1511, Protein of unknown FT function (DUF1511)" FT /inference="protein motif:COG:COG5608 Conserved secreted FT protein; S Function unknown" FT /inference="protein motif:Gene3D:G3D.1.10.238.10 no FT description InterPro:IPR011992 EF-Hand type GO:Molecular FT Function:calcium ion binding (GO:0005509)" FT /inference="protein motif:HMMPfam:PF07427 DUF1511 FT InterPro:IPR010885 Protein of unknown function DUF1511" FT /inference="protein motif:HMMSmart:SM00769 no description" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32794.1" FT /translation="MGIIGKVIGAVFILLIIWGGYIAYALNNASPKVSVAWGEVTEEKT FT EIIINASIGKPLLVPVSIDELRFLFMGMQIGRLGEFNYSPFGTRIQASLEMDNEKIVDA FT ILKYFEKGERGNLTVVIKPKMLFLSKEVEVSQEINEKVLEKIHLKAQSQNIAGLSIIKT FT PELKDTVVRYLGREGNKAVFMTDLVLYNPNPYPLPILKTNYKVWVNGLKLGEGESLKTT FT VIPAGGTVKLPVKTYVLVSNIPKAWEMHVRNNETSIVRAEVFLRLQISVPGFSGTKDVT FT LKTIDQTVKTDIMGEINRALSEV" FT gene complement(277045..278508) FT /locus_tag="TGAM_0293" FT /note="tg0293" FT CDS complement(277045..278508) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0293" FT /product="Oxidoreductase" FT /note="FAD/NAD(P)-binding Rossmann fold Superfamily FT protein" FT /db_xref="GOA:C5A3I3" FT /db_xref="InterPro:IPR002218" FT /db_xref="InterPro:IPR006076" FT /db_xref="InterPro:IPR013027" FT /db_xref="UniProtKB/TrEMBL:C5A3I3" FT /inference="protein motif:CDD:COG2509, Uncharacterized FT FAD-dependent dehydrogenases [General function prediction FT only]" FT /inference="protein motif:COG:COG2509 Uncharacterized FT FAD-dependent dehydrogenases; R General function prediction FT only" FT /inference="protein motif:Gene3D:G3D.3.50.50.60 no FT description" FT /inference="protein motif:HMMPanther:PTHR10617 FT FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10617:SF18 gb FT def:hypothetical 31.9 kda protein in hdrd 3region (orf3)" FT /inference="protein motif:HMMPfam:PF03486 HI0933_like FT InterPro:IPR004792 HI0933-like protein" FT /inference="protein motif:ProfileScan:PS50205 NAD_BINDING FT InterPro:IPR000205 NAD-binding site" FT /inference="protein motif:superfamily:SSF51905 FT FAD/NAD(P)-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32795.1" FT /translation="MVSGNGSGRFYDVVIIGAGPAGLFAAYELAEKSDLSVLVIDEGGD FT VKQRVCPMFELGYCVECKPCHIMSGVGGAGGLSDGTINLRPDIGGDLSELTNDENYAWQ FT LVWEVDQIFLKHKAPRNLYKGDPEQVRYWEQKAAQAGVKFVPIIQRHIGSDRTPEVIDD FT IKRHLESKGVKFLLWTKALEFGQGWVKVRRGKEVFEIKARYIIVAPGRGGADWFHEVAQ FT RIGLKARHGPIDVGVRVEVPAIVMEPITSINHDPKFHIYTDTYDDFVRTFCTNPNGFVV FT EERYDGYVGVNGHSMHEKKSNNTNFAFLSRIELTEPVEDTTAYGKSIAQLATTIGGGKP FT LIQRLGDLRRGRRSTWARIRRSDVEPTLRNVTPGDIAMALPHRVVTNIIEGLEKLDRVL FT PGVASDHTLLYAPEIKYYAMKVEVDENLETSIEGIFAAGDGAGLSRDIVNAAATGLLAA FT RGILKKEGLHTEKDFRKPGNWRKIIEELP" FT gene complement(278590..278937) FT /locus_tag="TGAM_0294" FT /note="tg0294" FT CDS complement(278590..278937) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0294" FT /product="Hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3I4" FT /protein_id="ACS32796.1" FT /translation="MKIIKAILMINLAVILTSAFVIGLMMAVLLFVIFAVLHGFVLLVD FT YGLSRGPVAPSADSRLKYFGILLGFFSMNPLIEGLSTSNWVEAFAALTLVLGVYIVFED FT VSNELYHINVN" FT gene complement(278924..279448) FT /locus_tag="TGAM_0295" FT /note="tg0295" FT CDS complement(278924..279448) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0295" FT /product="Hypothetical protein" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3I5" FT /protein_id="ACS32797.1" FT /translation="MLTMNKCESMILYGVTSLFISSVLISHFGVLRGIYVLSANLAVLV FT PWLSLMALGSSGRANEFQRRVVLFLSGIFTVSLLILGSSFGAWDAVLDITEVFGLFMTF FT PAIVLVFKWKLSRMGKKLQYPPRTVRELWFFQWIADISIAQKASNPVWVFVFLLPSLLG FT GYLVYKAFENY" FT gene complement(279662..280342) FT /locus_tag="TGAM_0296" FT /note="tg0296" FT CDS complement(279662..280342) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0296" FT /product="Hypothetical protein" FT /note="8 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3I6" FT /protein_id="ACS32798.1" FT /translation="MGDLGLKKSFLLLFLFYLGIAFILNYENVSVEYIISLVVFPLALV FT VMILLLLGFKDDVFFGFFFLLIGFVAATSLRVPILIKLLVIFGVPVFWFLLYLDLKEMD FT WIGSLVYKILHLNWKKRLLLLIADSVFILTITLELLKCSSMSITVKIFILLACVVVFVI FT FAKISQEYKDVKTKKDILRVSAWLYVFIYVIVKMGFDAICMLLQIIAPLAWVVLLALII FT VQSN" FT gene complement(280349..281350) FT /locus_tag="TGAM_0297" FT /note="tg0297" FT CDS complement(280349..281350) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0297" FT /product="Conserved hypothetical protein" FT /note="Some similarity with PH0603" FT /db_xref="UniProtKB/TrEMBL:C5A3I7" FT /protein_id="ACS32799.1" FT /translation="MTGGGMVYFTVKVRNYRPDKLDVRGFIEDEAGAVIVKMGDSGVYT FT IPAREEKSFSFSYTLYGIANHTFKLFIDNTDGKPNGNGDEKWKKVKVEVKPIKGIGLKQ FT VGVECDNLYFKYDMGNYKAKLACKFVIYNGYNFSLEVNGKIMAKMNASVLNKYLQSDSL FT VTSINPHTISAGQYFAINSTAYFEISKSSLPRLIRVLSGAGLIFPYWEDAANDIRVETE FT FYGATIPIEITYDVPFDRIGIQRFTFIESTYIEVDQIAVVTDVATDVFLTYELKTKTIP FT LADIEFIQNALNKLPPSIRQKVSPITNPLLQQISINWLANWMKEKLITEWRG" FT gene complement(281456..282022) FT /locus_tag="TGAM_0298" FT /note="tg0298" FT CDS complement(281456..282022) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0298" FT /product="Conserved hypothetical protein" FT /note="7 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3I8" FT /protein_id="ACS32800.1" FT /translation="MVVEISTLFLYLSLVFVMAISAKTKSCHLGLAILVFSSTFIAGSE FT YNNTYIAVISWLALSALFSYLFYLEYERPLSKREENESVSDVILGYLLGFFILVLLKSH FT GAGWILSLLASYWVFHLMLLIDHRENRRAFYLLKVPYVVLSWGALVEEFGFQRELIPFL FT IAYLVVFVLWLKFDLPRIWRPPRIT" FT gene complement(282072..282620) FT /locus_tag="TGAM_0299" FT /note="tg0299" FT CDS complement(282072..282620) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0299" FT /product="Hypothetical protein" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3I9" FT /protein_id="ACS32801.1" FT /translation="MRFIRSFLSGFFLILLSSLIMVRVRGLESGLYVFAINVMFIPMWG FT TMVLWSRGTGKNLLIKLITLTSLLSSVGALGVIALVYNDFEKATGVIVSFLAWYLLFIA FT PMYCAKKSRERSGEQLSYPPTDAKYFWVFQWIDTGILAVKSDEPLKVFLYLLPGLIGGY FT LIILGLIEAKRAGDSMGDS" FT gene complement(283033..285522) FT /locus_tag="TGAM_0300" FT /note="tg0300" FT CDS complement(283033..285522) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0300" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3J0" FT /inference="protein motif:superfamily:SSF49303 FT beta-Galactosidase/glucuronidase domain InterPro:IPR006102 FT Glycoside hydrolase family 2, immunoglobulin-like FT beta-sandwich GO:Molecular Function:hydrolase activity, FT hydrolyzing O-glycosyl compounds (GO:0004553), Biological FT Process:carbohydrate metabolism (GO:0005975)" FT /protein_id="ACS32802.1" FT /translation="MDYSEDELKDMAREIAQNGLPDEVVDELRSSGWNDEEIKALEEYI FT KENTDSITGSFSMSAFLQALSDSFIFTGWKYAKYETWAVEREFWPASPSQAPSGTLTSN FT PLVSTSSIRSAIINQNPNSLVYAVRSTKSDVVDTIYSASIYYSNGGIGFSMVTIDSRGK FT TVRRYSWENALKAYRTLGELYTIAVAIEKGNSNPELWGLARQKYDELEEYMKVRLVSTS FT FTPNPSPPRPRPMPTPLHLSTPEPLTSTSSQEPVFRINAVRVVRASHDANPIKYHVAID FT YTVSGGQVVVYNVTFNTGSEEQAVTPGILDPGSGTIESGNLTTSVGVLDGSLKVKVSGI FT VTITYRPVTGPGGENVVIKSTSSVESVSEPATLDYGDETTSIRVIKLEYTGTFDLISQL FT DPEKVKVKVMPSKDVAEVGDSITFRLRIENGNTLPVRGYYTLYAQVPDGSGKRTVRLGG FT GKLTLGANKETEVTVSTVPYPEPGRYEYFAVFSYAGFQAEDRGSVLVQREDDPGKVYIE FT GVEVDPDLPKEYETVNFTVTLGNTYPTAEDLKIALYIDGRVVDQKSVEILANSENKVVL FT RWYSAEKGDHHYYIEVNRTLGDINLGKVDTYSGNITAFDGDFGVSFTVWPRTLDGGGRV FT WFTLKLRVYHSKYDFKDNSNDPLPDILMSTSPTVTYHIKIVDQNGIVIKNFNYDIPDKA FT GVYTLWISGPILYRTGNYTFKLVVDDFIYNEEGKPLGLGTEEQREAKVEVTPPTTKKAF FT MGCDNMKLSAEKGNLVLDMKCEVYFTNPTDVEWNITRIDIDPSRILATERTKDVTIGIP FT AETIITRKVAPGGVGEF" FT gene 285692..285895 FT /locus_tag="TGAM_0301" FT /note="tg0301" FT CDS 285692..285895 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0301" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3J1" FT /protein_id="ACS32803.1" FT /translation="MLNAVIFSFKSLLDAPLEAVVPFTTPENILRKSIAIKATPFHFMK FT TTKSYNTGRFKTFFYPNFTYYQ" FT gene 285955..286515 FT /locus_tag="TGAM_0302" FT /note="tg0302" FT CDS 285955..286515 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0302" FT /product="Conserved hypothetical protein" FT /note="Contains CBS domain pair (PF00571)" FT /db_xref="GOA:C5A3J2" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:C5A3J2" FT /inference="protein motif:CDD:COG0517, FOG:CBS domain FT [General function prediction only]" FT /inference="protein motif:CDD:COG2524, Predicted FT transcriptional regulator, contains C-terminal CBS domains FT [Transcription]" FT /inference="protein motif:CDD:COG3448, FT CBS-domain-containing membrane protein [Signal transduction FT mechanisms]" FT /inference="protein motif:COG:COG0517 FOG:CBS domain; R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.630.30 no FT description" FT /inference="protein motif:HMMPanther:PTHR11911 FT INOSINE/GUANOSINE-5'-MONOPHOSPHATE DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR11911:SF2 FT INOSINE-5-MONOPHOSPHATE DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00571 CBS FT InterPro:IPR000644 CBS" FT /inference="protein motif:HMMSmart:SM00116 no description FT InterPro:IPR000644 CBS" FT /inference="protein motif:ProfileScan:PS50147 SNF4_REP FT InterPro:IPR000644 CBS" FT /inference="protein motif:superfamily:SSF54631 CBS-domain" FT /protein_id="ACS32804.1" FT /translation="MVRLPMEVPPGKWSKAKKVHLIHTKRRMLQLKRKDELSYNIRYIS FT KVPVKLVMDREFLTLHPEESLSKLVQSLRGEESSAVVVDDEGKLLGFITMKDLLRFFEP FT PRRYSIVGINLLKKYSISNASRVEDIMVRKPITIHVDENLGRAIRIMLETGKHHLPVVD FT DKNRVHGILEVKDIIRLIRIVSS" FT gene 286545..287687 FT /gene="napA-1" FT /locus_tag="TGAM_0303" FT /note="tg0303" FT CDS 286545..287687 FT /codon_start=1 FT /transl_table=11 FT /gene="napA-1" FT /locus_tag="TGAM_0303" FT /product="Na+/H+ antiporter, napA type (napA)" FT /note="11 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3J3" FT /db_xref="InterPro:IPR006153" FT /db_xref="UniProtKB/TrEMBL:C5A3J3" FT /inference="protein motif:CDD:COG3263, NhaP-type Na+/H+ and FT K+/H+ antiporters with a unique C-terminal domain FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:KefB, Kef-type K+ transport FT systems, membrane components [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:Na_H_Exchanger, FT Sodium/hydrogen exchanger family" FT /inference="protein motif:CDD:RosB, Kef-type K+ transport FT system, predicted NAD-binding component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG0475 Kef-type K+ transport FT systems, membrane components; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPanther:PTHR16254 FAMILY NOT FT NAMED" FT /inference="protein motif:HMMPfam:PF00999 Na_H_Exchanger FT InterPro:IPR006153 Sodium/hydrogen exchanger GO:Biological FT Process:regulation of pH (GO:0006885), Molecular FT Function:solute:hydrogen antiporter activity (GO:0015299), FT Cellular Component:integral to membrane (GO:0016021)" FT /protein_id="ACS32805.1" FT /translation="MDVFLELALILIVAKLFGYLAVRLGFPAALGQLIGGILIGPSILG FT LVGFDEAVKLLADLGVVMLLFLAGLETDVEEFKHVGIPAFIIASLGVLIPFILGYVGAL FT AWGYSNIQAMFLGGVLTATSVGLTTSILMEMKKLRTRVGTTILAAAVVDDVLGIIVLTI FT LVGINTRGSVYFKDLLIILGEVVLYFGIGLLIGNPAVREALKLSERITLPETVTAFAIA FT IMLIFAYLAEQFQIAGITGAYLAGLLVASTDEAKEVDRKFMTIGYSLFIPVFLVSIGIE FT SDVRVLAHAGTFALIYAILAIVSKVVGCGFGAFVSKFRPIESLQVGVGMIPRMEVALIM FT ANVALNEGVFDSGTFSIPVTMVLVTTIVTPFLLKWAFSRE" FT gene 287698..288822 FT /gene="napA-2" FT /locus_tag="TGAM_0304" FT /note="tg0304" FT CDS 287698..288822 FT /codon_start=1 FT /transl_table=11 FT /gene="napA-2" FT /locus_tag="TGAM_0304" FT /product="Na+/H+ antiporter, napA type (napA)" FT /note="10 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3J4" FT /db_xref="InterPro:IPR006153" FT /db_xref="UniProtKB/TrEMBL:C5A3J4" FT /inference="protein motif:CDD:COG3263, NhaP-type Na+/H+ and FT K+/H+ antiporters with a unique C-terminal domain FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:KefB, Kef-type K+ transport FT systems, membrane components [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:Na_H_Exchanger, FT Sodium/hydrogen exchanger family" FT /inference="protein motif:CDD:RosB, Kef-type K+ transport FT system, predicted NAD-binding component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG0475 Kef-type K+ transport FT systems, membrane components; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF00999 Na_H_Exchanger FT InterPro:IPR006153 Sodium/hydrogen exchanger GO:Biological FT Process:regulation of pH (GO:0006885), Molecular FT Function:solute:hydrogen antiporter activity (GO:0015299), FT Cellular Component:integral to membrane (GO:0016021)" FT /inference="protein motif:ScanRegExp:PS00287 CYSTATIN FT InterPro:IPR000010 Proteinase inhibitor I25, cystatin FT GO:Molecular Function:cysteine protease inhibitor activity FT (GO:0004869)" FT /protein_id="ACS32806.1" FT /translation="MEILLLIAVMLATAKLMGYLFERLGQPVVLGQIFGGLLIGIFFET FT NPVIGQFANLGVLLLLFMAGLESELEEFKRVGKQSVVVASLGVLVAFLFGFAVAYLFVP FT LHEAILYGAMMTPTSVSITVKVLMEMRKLNTREGTTILAAAVVDDVLGILVLTVAISMI FT KGGEVNYASLAEVVLSVSLLLFFFLYFGPGLADRVFRILSRVDLPESETAFALVFLIVF FT AFLAEHLNLASILGAYLTGLALGQSSKKKTIMDHMNVLGYSLFIPLFFVEVGMKIELDY FT ILHAGLFAVLYTIASIVSKIVGCGLGARLAGFDWGSSLRIGVGMIPRMGVELAMLAVAM FT GSGIIGPDALTVAILMVFVTTVITPPLLKWLYSR" FT gene 288925..289539 FT /locus_tag="TGAM_0305" FT /note="tg0305" FT CDS 288925..289539 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0305" FT /product="Multiple antibiotic resistance (Mar)-related FT protein" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3J5" FT /db_xref="InterPro:IPR002771" FT /db_xref="UniProtKB/TrEMBL:C5A3J5" FT /inference="protein motif:CDD:MarC, MarC family integral FT membrane protein" FT /inference="protein motif:CDD:MarC, Multiple antibiotic FT transporter [Intracellular trafficking and secretion]" FT /inference="protein motif:COG:COG2095 Multiple antibiotic FT transporter; U Intracellular trafficking, secretion, and FT vesicular transport" FT /inference="protein motif:HMMPfam:PF01914 MarC FT InterPro:IPR002771 Multiple antibiotic resistance FT (MarC)-related proteins" FT /protein_id="ACS32807.1" FT /translation="MSEFSTILSSALLMLIMIDPSDKILLVSFLREDFHIEDIKALIVR FT ANLIGFLLLASFAVAGQIILQEIFHIDINALKVAGGFVLFKIGLEALEGGGMFTLKRER FT DILALAAVPVAMPLIAGPAAITAVITLTAEYGYLVSLSATAIAIAVVALSMFVALYMMK FT SVNKTFLSVTIRIIGLFIMAIGAQMMVEGVVGIYLLMTFSG" FT gene 289604..290911 FT /gene="hisS" FT /locus_tag="TGAM_0306" FT /note="tg0306" FT CDS 289604..290911 FT /codon_start=1 FT /transl_table=11 FT /gene="hisS" FT /locus_tag="TGAM_0306" FT /product="Histidyl-tRNA synthetase (hisS)" FT /EC_number="6.1.1.21" FT /db_xref="GOA:C5A3J6" FT /db_xref="InterPro:IPR002314" FT /db_xref="InterPro:IPR004154" FT /db_xref="InterPro:IPR004516" FT /db_xref="InterPro:IPR004517" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR015807" FT /db_xref="UniProtKB/TrEMBL:C5A3J6" FT /inference="protein motif:CDD:HGTP_anticodon, Anticodon FT binding domain" FT /inference="protein motif:CDD:HGTP_anticodon, HGTP FT anticodon binding domain, as found at the C-terminus of FT histidyl, glycyl, threonyl and prolyl tRNA synthetases, FT which are classified as a group of class II aminoacyl-tRNA FT synthetases (aaRS)" FT /inference="protein motif:CDD:HisRS-like_core, Class II FT Histidinyl-tRNA synthetase (HisRS)-like catalytic core FT domain" FT /inference="protein motif:CDD:HisRS_anticodon, HisRS FT Histidyl-anticodon binding domain" FT /inference="protein motif:CDD:HisS, Histidyl-tRNA FT synthetase [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:HisZ, ATP FT phosphoribosyltransferase involved in histidine FT biosynthesis [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ThrS, Threonyl-tRNA FT synthetase [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:tRNA-synt_2b, tRNA synthetase FT class II core domain (G, H, P, S and T)" FT /inference="protein motif:COG:COG0124 Histidyl-tRNA FT synthetase; J Translation, ribosomal structure and FT biogenesis" FT /inference="protein motif:Gene3D:G3D.3.30.930.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.800 no FT description" FT /inference="protein motif:HMMPanther:PTHR11476 FT HISTIDYL-TRNA SYNTHETASE" FT /inference="protein motif:HMMPfam:PF00587 tRNA-synt_2b FT InterPro:IPR002314 tRNA synthetase, class II (G, H, P and FT S) GO:Molecular Function:aminoacyl-tRNA ligase activity FT (GO:0004812), Molecular Function:ATP binding (GO:0005524), FT Biological Process:tRNA aminoacylation for protein FT translation (GO:0006418)" FT /inference="protein motif:HMMPfam:PF03129 HGTP_anticodon FT InterPro:IPR004154 Anticodon-binding GO:Molecular FT Function:aminoacyl-tRNA ligase activity (GO:0004812), FT Molecular Function:ATP binding (GO:0005524), Biological FT Process:protein biosynthesis (GO:0006412)" FT /inference="protein motif:HMMPIR:PIRSF001549 Histidyl-tRNA FT synthetase InterPro:IPR004516 Histidyl-tRNA synthetase, FT class IIa GO:Molecular Function:histidine-tRNA ligase FT activity (GO:0004821), Molecular Function:ATP binding FT (GO:0005524), Cellular Component:cytoplasm (GO:0005737), FT Biological Process:histidyl-tRNA aminoacylation FT (GO:0006427)" FT /inference="protein motif:HMMTigr:TIGR00442 FT hisS:histidyl-tRNA synthetase InterPro:IPR004516 FT Histidyl-tRNA synthetase, class IIa GO:Molecular FT Function:histidine-tRNA ligase activity (GO:0004821), FT Molecular Function:ATP binding (GO:0005524), Cellular FT Component:cytoplasm (GO:0005737), Biological FT Process:histidyl-tRNA aminoacylation (GO:0006427)" FT /inference="protein motif:ProfileScan:PS50862 FT AA_TRNA_LIGASE_II InterPro:IPR006195 Aminoacyl-transfer RNA FT synthetase, class II GO:Molecular Function:aminoacyl-tRNA FT ligase activity (GO:0004812), Molecular Function:ATP FT binding (GO:0005524), Biological Process:tRNA FT aminoacylation for protein translation (GO:0006418)" FT /inference="protein motif:superfamily:SSF52954 FT Anticodon-binding domain of Class II aaRS" FT /inference="protein motif:superfamily:SSF55681 Class II FT aaRS and biotin synthetases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32808.1" FT /translation="MKVERVKGTRDFLPEEMAKRRWVFERIREVFERYNFHEVLTPTFE FT YTELFKLRSGEEVVKQLYAFLDKGGRDISLRPDMTSSVARLYVSAFQTAPKPIKWYYIA FT NMFRYEEPQSGRFREFWQAGVELIGSDKVEADAEVIALFTESYLATGLEDFTVNIGDRV FT LLDEFAKMLGVKDDIGLMRLIDKKDKLTQEEFVKALKDFGLSDEDVEKVLSLVEIKGEP FT DEVLPKAEELFTSEKAKAEIRRLYELVDLLDAYGVSKWIRIDLGIARGFDYYTSVVFEA FT IAPNDLGIGSIGGGGRYDNLIEVFGGKPTPATGFAIGIERLIPILEWKGLIPEIRLRPD FT VYVIPIGKDVELRKTAVEVVSALRRAGVKADVELTGRKLRKALDHAGRLNVPYVVLIGK FT RDLENGNVTIRDMETGEQRVVKKEGIVEELLELLGL" FT gene complement(290954..292336) FT /locus_tag="TGAM_0307" FT /note="tg0307" FT CDS complement(290954..292336) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0307" FT /product="Pyridoxal phosphate-dependent aminotransferase, FT class III family" FT /db_xref="GOA:C5A3J7" FT /db_xref="InterPro:IPR005814" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:C5A3J7" FT /inference="protein motif:CDD:Aminotran_3, Aminotransferase FT class-III" FT /inference="protein motif:CDD:ArgD, FT Ornithine/acetylornithine aminotransferase [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:BioA, FT Adenosylmethionine-8-amino-7-oxononanoate aminotransferase FT [Coenzyme metabolism]" FT /inference="protein motif:CDD:GabT, 4-aminobutyrate FT aminotransferase and related aminotransferases [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:HemL, FT Glutamate-1-semialdehyde aminotransferase [Coenzyme FT metabolism]" FT /inference="protein motif:COG:COG0160 4-aminobutyrate FT aminotransferase and related aminotransferases; E Amino FT acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.640.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11986 FT AMINOTRANSFERASE InterPro:IPR005814 Aminotransferase FT class-III GO:Molecular Function:transaminase activity FT (GO:0008483), Molecular Function:pyridoxal phosphate FT binding (GO:0030170)" FT /inference="protein motif:HMMPanther:PTHR11986:SF49 FT 4-AMINOBUTYRATE AMINOTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00202 Aminotran_3 FT InterPro:IPR005814 Aminotransferase class-III GO:Molecular FT Function:transaminase activity (GO:0008483), Molecular FT Function:pyridoxal phosphate binding (GO:0030170)" FT /inference="protein motif:ScanRegExp:PS00600 FT AA_TRANSFER_CLASS_3 InterPro:IPR005814 Aminotransferase FT class-III GO:Molecular Function:transaminase activity FT (GO:0008483), Molecular Function:pyridoxal phosphate FT binding (GO:0030170)" FT /inference="protein motif:superfamily:SSF53383 FT PLP-dependent transferases" FT /protein_id="ACS32809.1" FT /translation="MYSDYPRIVVKPPGPRAKKLIERERSAISPGLGVKLFPLVPERGR FT GALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKEVQEQVARIQHSMIGYTHSKRAIEVA FT EKLIEMAPIERPLVLFGMSGSDAVDMALQAARFSTRRPWILSFIGAYHGQTYGATSVAA FT FQSSQKRGLSPLVPNVVWVPYPNPYRNPWGINGYDEPDELINRFLDYLESYIFAHVVPP FT DEIALLIAEPIQGDAGIVVPPEGFFAELKRLLDEHNILLAMDEVQTGIGRTGKWFASEW FT FGVKPDLLIFGKGVASGMGLSGVIGRRELLENLTSGSALLTPAANPVVSAAAKATLEII FT EGENLLENALRVGEFIKKRLGEMKEDYEVIGDVRGKGLMRGAEIVKPNGKPDLELTGKI FT CWRAFELGLILPSYGMFGNVIRITPPLVITEEIAEKGLEIMERALKDALAGKVTHRVVT FT WH" FT gene complement(292376..293935) FT /locus_tag="TGAM_0308" FT /note="tg0308" FT CDS complement(292376..293935) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0308" FT /product="Sodium/alanine symporter" FT /note="13 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3J8" FT /db_xref="InterPro:IPR001463" FT /db_xref="UniProtKB/TrEMBL:C5A3J8" FT /inference="protein motif:CDD:AlsT, Na+/alanine symporter FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:Na_Ala_symp, Sodium:alanine FT symporter family" FT /inference="protein motif:COG:COG1115 Na+/alanine FT symporter; E Amino acid transport and metabolism" FT /inference="protein motif:FPrintScan:PR00175 NAALASMPORT FT InterPro:IPR001463 Sodium:alanine symporter GO:Molecular FT Function:sodium:amino acid symporter activity (GO:0005283), FT Biological Process:sodium ion transport (GO:0006814), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:HMMPfam:PF01235 Na_Ala_symp FT InterPro:IPR001463 Sodium:alanine symporter GO:Molecular FT Function:sodium:amino acid symporter activity (GO:0005283), FT Biological Process:sodium ion transport (GO:0006814), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:HMMTigr:TIGR00835 agcS:amino acid FT carrier protein InterPro:IPR001463 Sodium:alanine symporter FT GO:Molecular Function:sodium:amino acid symporter activity FT (GO:0005283), Biological Process:sodium ion transport FT (GO:0006814), Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50285 FT AMINO_ACID_PERMEASE_2 InterPro:IPR002293 Amino FT acid/polyamine transporter I GO:Molecular Function:amino FT acid-polyamine transporter activity (GO:0005279), FT Biological Process:amino acid transport (GO:0006865), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:ScanRegExp:PS00873 FT NA_ALANINE_SYMP InterPro:IPR001463 Sodium:alanine symporter FT GO:Molecular Function:sodium:amino acid symporter activity FT (GO:0005283), Biological Process:sodium ion transport FT (GO:0006814), Cellular Component:membrane (GO:0016020)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32810.1" FT /translation="MLKMSAIVDFINWLDGEVWGVPMIVLLVGTGILLTTILKAIQFRR FT LGWAIRFTLFEGRKKTGEGDITPFQALMATISGTVGIGNIAGVATAIHFGGPGALFWMW FT ITALVGMATRYSEGLLGVAFRDKLPDGTQIGGTFNFLEKGFAMKNIPKTGKYIAAVFTL FT LFAVFVGRDAMKLSGATQVGAIIIAVLFAILGLFLLKDDAYPTLGKVLAVLFALFASIA FT AFGIGNMTQSNSVADALKTAFHIPMWATGLALAVLTFIVVIGGIKRIGEVAEMLVPFMA FT IIYFIFAIGVWIKFAGKLPSAFALIVKDAFTGQAVAGGAIGQVVLWGVKRGLFSNEAGL FT GTATLAHAAAKTDHPSRQAHVAMLGPFIDTLIICTLTGVSIVVTEAYLDPNLNGAPLTQ FT AAFAAAFGHAGEIMVAIGIVLFAYSTILAWSFYGRQNVMYLAKWLEKDPEKFARLYPRL FT HLIYNLLFVVFIYIGAVTKLETVWNFSDMMNGLMAIPNLIGLLVLSWYVKEKTEEFISA FT NP" FT gene 294188..294484 FT /locus_tag="TGAM_0309" FT /note="tg0309" FT CDS 294188..294484 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0309" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3J9" FT /protein_id="ACS32811.1" FT /translation="MIKRRLCREYIEEIERLERSIRELEEEIIELRMQLKRKTEEVTSL FT SIENTSLRYKIELLERREKQIIEFLKKLKIPFVIVQEEGLEDPDSGQNCGEKP" FT gene 294528..297269 FT /gene="alaS" FT /locus_tag="TGAM_0310" FT /note="tg0310" FT CDS 294528..297269 FT /codon_start=1 FT /transl_table=11 FT /gene="alaS" FT /locus_tag="TGAM_0310" FT /product="Alanyl-tRNA synthetase (alaS)" FT /EC_number="6.1.1.7" FT /db_xref="GOA:C5A3K0" FT /db_xref="InterPro:IPR002318" FT /db_xref="InterPro:IPR003156" FT /db_xref="InterPro:IPR012947" FT /db_xref="InterPro:IPR018162" FT /db_xref="InterPro:IPR018163" FT /db_xref="InterPro:IPR018164" FT /db_xref="InterPro:IPR018165" FT /db_xref="InterPro:IPR022429" FT /db_xref="UniProtKB/TrEMBL:C5A3K0" FT /inference="protein motif:COG:COG0013 Alanyl-tRNA FT synthetase; J Translation, ribosomal structure and FT biogenesis" FT /inference="protein motif:FPrintScan:PR00980 TRNASYNTHALA FT InterPro:IPR002318 Alanyl-tRNA synthetase, class IIc FT GO:Molecular Function:alanine-tRNA ligase activity FT (GO:0004813), Molecular Function:ATP binding (GO:0005524), FT Biological Process:alanyl-tRNA aminoacylation (GO:0006419)" FT /inference="protein motif:HMMPanther:PTHR11777 ALANYL-TRNA FT SYNTHETASE" FT /inference="protein motif:HMMPanther:PTHR11777:SF2 FT ALANYL-TRNA SYNTHETASE" FT /inference="protein motif:HMMPfam:PF01411 tRNA-synt_2c FT InterPro:IPR002318 Alanyl-tRNA synthetase, class IIc FT GO:Molecular Function:alanine-tRNA ligase activity FT (GO:0004813), Molecular Function:ATP binding (GO:0005524), FT Biological Process:alanyl-tRNA aminoacylation (GO:0006419)" FT /inference="protein motif:HMMPfam:PF02272 DHHA1 FT InterPro:IPR003156 Phosphoesterase, DHHA1 GO:Molecular FT Function:nucleic acid binding (GO:0003676)" FT /inference="protein motif:HMMPfam:PF07973 tRNA_SAD FT InterPro:IPR012947 Threonyl/alanyl tRNA synthetase, SAD" FT /inference="protein motif:HMMTigr:TIGR00344 FT alaS:alanyl-tRNA synthetase InterPro:IPR002318 Alanyl-tRNA FT synthetase, class IIc GO:Molecular Function:alanine-tRNA FT ligase activity (GO:0004813), Molecular Function:ATP FT binding (GO:0005524), Biological Process:alanyl-tRNA FT aminoacylation (GO:0006419)" FT /inference="protein motif:ProfileScan:PS50860 FT AA_TRNA_LIGASE_II_ALA InterPro:IPR002318 Alanyl-tRNA FT synthetase, class IIc GO:Molecular Function:alanine-tRNA FT ligase activity (GO:0004813), Molecular Function:ATP FT binding (GO:0005524), Biological Process:alanyl-tRNA FT aminoacylation (GO:0006419)" FT /inference="protein motif:superfamily:SSF55186 FT Threonyl-tRNA synthetase (ThrRS), second 'additional' FT domain" FT /inference="protein motif:superfamily:SSF55681 Class II FT aaRS and biotin synthetases" FT /inference="protein motif:superfamily:SSF57059" FT /inference="protein motif:superfamily:SSF57783 Zinc FT beta-ribbon" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32812.1" FT /translation="MGMDMTTRMFKEEGWVRKKCPKCGKYFWTLDPDRETCGDPPCDEY FT GFIGKPGIPKKYTLDEMREKFLSFFEKHGHGRVKRYPVLPRWRDDVLLVGASIMDFQPW FT VISGEADPPANPLTISQPSIRFTDIDNVGITGRHFTIFEMMAHHAFNYPGKPIYWMDET FT VELAFEFFTKELKMKPEDITFKENPWAGGGNAGPAFEVLYRGLEVATLVFMQYKKAPEN FT ADPSQVVEIKGDYYVPMETKVVDTGYGLERLVWMSHGTPTAYDAVLGYVIEPLKKMAGV FT EKIDERILMENSRLAGMFDIEDMGDLRYLREQVAKRVGITVEELEKAVRPYELIYAIAD FT HTKALTFMLADGVIPSNVKAGYLARLLIRKSIRHLRELGLEVPLAEIVAMHIKELSPTF FT PEFKEMEDVILDIINVEEKRYHETLKRGSDLVRREIAKLKKKGINELPLEKLILFYESH FT GLTPEIVAEVAQKEGIKVEIPDNFYTLVAKQAEKTEKKTVAEYVVDFELVKDLPETRTL FT YYEDPFMKEFDAEVVKVIDDWVVLNQTAFYPEGGGQPYDTGTLEVDGEEVRVTNVQKVG FT KVILHRVDKPELFKKGAKVHGKLDWDRRIQHMRHHTGTHVLMGALVRVLGKHVWQAGSQ FT LHTDWARLDISHYKRITEEELREIERLANRVVMENRKVTWEWLPRTEAEMKYGFRLYQG FT GVVPGRTIRVVKIEDWDVQACGGTHLPNTGLIGPIKILRTERIQDGVERIIFAAGEAAI FT DWMQETERLLKKTAEIFRVPPEKVPETAERFFNEWKEARKEVEKLRKELAKLLVYELEN FT KVEKVGDIEFIGAVVEGTMNDLREAANRLRKEKRVVVLISREGHFVVAVGDGLDLKAGE FT LAKIITSVAGGGGGGRKELAQGRIKNPLKAEEAIEEVKRRLG" FT gene 297304..297693 FT /locus_tag="TGAM_0311" FT /note="tg0311" FT CDS 297304..297693 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0311" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3K1" FT /protein_id="ACS32813.1" FT /translation="MSPIKVKTLTRQIIALADELGFKAVPEYRTPDGTRIDVAILESEE FT KVLAIELEASFKWFPQRVLYDVVKAHRAGFPELWIVTPFKASPGWVLSYAEEIGLRVRL FT IDEKETLGELGTFLGRSVFLPGDQV" FT gene complement(297664..298281) FT /locus_tag="TGAM_0312" FT /note="tg0312" FT CDS complement(297664..298281) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0312" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3K2" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32814.1" FT /translation="MKLIAIIGSFSFVMGITVGVMGLILKRLSQEITTTHRNNLHKRVK FT YHRAQYKAGMVMNKALLVMAIVTLALFGYAVKTAHLPPASVSYHEVFYKDNTTVVFVEK FT DGWGLFEIDLKPKVKDFELSMSFPKGTEYLVEYNGKQYNGTNEFKVKVTKGGTMYVHFK FT VPLDIVNSIYHQNGKAEIKVHMEKIPFWRDDYTLHLIPRKED" FT gene 298241..298921 FT /gene="tpiA" FT /locus_tag="TGAM_0313" FT /note="tg0313" FT CDS 298241..298921 FT /codon_start=1 FT /transl_table=11 FT /gene="tpiA" FT /locus_tag="TGAM_0313" FT /product="Triosephosphate isomerase (tpiA)" FT /EC_number="5.3.1.1" FT /db_xref="GOA:C5A3K3" FT /db_xref="InterPro:IPR000652" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR020861" FT /db_xref="InterPro:IPR022891" FT /db_xref="UniProtKB/TrEMBL:C5A3K3" FT /inference="protein motif:BlastProDom:PD001005 FT TPIS_PYRFU_P95583; InterPro:IPR000652 Triosephosphate FT isomerase GO:Molecular Function:triose-phosphate isomerase FT activity (GO:0004807), Biological Process:metabolism FT (GO:0008152)" FT /inference="protein motif:CDD:TpiA, Triosephosphate FT isomerase [Carbohydrate transport and metabolism]" FT /inference="protein motif:COG:COG0149 Triosephosphate FT isomerase; G Carbohydrate transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.20.90 no FT description" FT /inference="protein motif:HMMPfam:PF00121 TIM FT InterPro:IPR000652 Triosephosphate isomerase GO:Molecular FT Function:triose-phosphate isomerase activity (GO:0004807), FT Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:HMMTigr:TIGR00419 FT tim:triosephosphate isomerase InterPro:IPR000652 FT Triosephosphate isomerase GO:Molecular FT Function:triose-phosphate isomerase activity (GO:0004807), FT Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:ProfileScan:PS50264 FMN_ENZYMES FT InterPro:IPR003009 FMN/related compound-binding core" FT /inference="protein motif:ScanRegExp:PS00171 TIM FT InterPro:IPR000652 Triosephosphate isomerase GO:Molecular FT Function:triose-phosphate isomerase activity (GO:0004807), FT Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:superfamily:SSF51351 FT Triosephosphate isomerase (TIM) InterPro:IPR000652 FT Triosephosphate isomerase GO:Molecular FT Function:triose-phosphate isomerase activity (GO:0004807), FT Biological Process:metabolism (GO:0008152)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32815.1" FT /translation="MTKLKEPIIAINFKTYIEATGKRALAIAKAAEKVYKETGITIVVA FT PQLADLRMVAESVEIPVFAQHIDPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILA FT DLEASIRRAEEVGLMTMVCSNNPAVSAAVAALGPDYVAVEPPELIGTGIPVSKAKPEVI FT TDTVELVKKVNPEVKVLTGAGISTGEDVKKALELGSVGVLLASGVTKAKDPEKAIRDLV FT SLII" FT gene 298973..299767 FT /gene="dph5" FT /locus_tag="TGAM_0314" FT /note="tg0314" FT CDS 298973..299767 FT /codon_start=1 FT /transl_table=11 FT /gene="dph5" FT /locus_tag="TGAM_0314" FT /product="Diphthine synthase (Diphtamide biosynthesis FT methyltransferase) (dph5)" FT /EC_number="2.1.1.98" FT /db_xref="GOA:C5A3K4" FT /db_xref="InterPro:IPR000878" FT /db_xref="InterPro:IPR004551" FT /db_xref="InterPro:IPR014776" FT /db_xref="InterPro:IPR014777" FT /db_xref="UniProtKB/Swiss-Prot:C5A3K4" FT /inference="protein motif:CDD:DPH5, Diphthamide FT biosynthesis methyltransferase [Translation, ribosomal FT structure and biogenesis]" FT /inference="protein motif:CDD:TP_methylase, Tetrapyrrole FT (Corrin/Porphyrin) Methylases" FT /inference="protein motif:COG:COG1798 Diphthamide FT biosynthesis methyltransferase; J Translation, ribosomal FT structure and biogenesis" FT /inference="protein motif:Gene3D:G3D.3.40.1010.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10882 DIPHTHINE FT SYNTHASE" FT /inference="protein motif:HMMPanther:PTHR10882:SF1 FT DIPHTHINE SYNTHASE" FT /inference="protein motif:HMMPfam:PF00590 TP_methylase FT InterPro:IPR000878 Uroporphyrin-III C/tetrapyrrole FT (Corrin/Porphyrin) methyltransferase GO:Biological FT Process:metabolism (GO:0008152), Molecular FT Function:methyltransferase activity (GO:0008168)" FT /inference="protein motif:HMMPIR:PIRSF036432 Diphthine FT synthase InterPro:IPR004551 Diphthine synthase GO:Molecular FT Function:diphthine synthase activity (GO:0004164), FT Biological Process:peptidyl-diphthamide biosynthesis from FT peptidyl-histidine (GO:0017183)" FT /inference="protein motif:HMMTigr:TIGR00522 dph5:diphthine FT synthase InterPro:IPR004551 Diphthine synthase GO:Molecular FT Function:diphthine synthase activity (GO:0004164), FT Biological Process:peptidyl-diphthamide biosynthesis from FT peptidyl-histidine (GO:0017183)" FT /inference="protein motif:superfamily:SSF53790 Cobalt FT precorrin-4 methyltransferase CbiF InterPro:IPR000878 FT Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) FT methyltransferase GO:Biological Process:metabolism FT (GO:0008152), Molecular Function:methyltransferase activity FT (GO:0008168)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32816.1" FT /translation="MALYFIGLGLYDERDITLKGLKTARKCDKIFAEFYTSLLAGTTME FT RIEGLIGKPIIRLSREDVELNFEKIVLPEAKEKDVAFLTAGDPMVATTHSDLRIRAKKA FT GVESYVIHAPSIYSAVAVTGLQIYKFGKSATVAYPERNWFPTSYYDVIKENRERGLHTL FT LFLDIKAEQNRYMTANEAMEILLQVEDMKKEGIFTPETLVVVLARAGSLNPTIRAGYVK FT DMIHEDFGRQPHVLIVPGRLHVVEAEYLVEFAGAPEEILEEV" FT gene 299808..299884 FT /locus_tag="TGAM_r005" FT /note="tg_tRNA-Val1" FT tRNA 299808..299884 FT /locus_tag="TGAM_r005" FT /product="tRNA-Val" FT /note="codon recognized: GUA" FT gene complement(299819..299917) FT /locus_tag="TGAM_0315" FT /note="tg0315" FT CDS complement(299819..299917) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0315" FT /product="SSV1 integrase-like protein, N-fragment" FT /note="Probable pseudo-gene, overlapping tRNA-Val1" FT /db_xref="UniProtKB/TrEMBL:C5A3K5" FT /protein_id="ACS32817.1" FT /translation="MVKLRLREVCNWWARGDSNPGPPPCKGGVITV" FT gene 300093..300266 FT /locus_tag="TGAM_0316" FT /note="tg0316" FT CDS 300093..300266 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0316" FT /product="SSV1 integrase-like protein, N-fragment" FT /note="Probable pseudo-gene, overlapping tRNA-Ala1" FT /db_xref="UniProtKB/TrEMBL:C5A3K6" FT /protein_id="ACS32818.1" FT /translation="MEEGRSFPQPFPEAVAKFCQKRFLWWTGRDLNPRPPPCEGGARTR FT LSYRPTPAYSGD" FT gene complement(300165..300242) FT /locus_tag="TGAM_r006" FT /note="tg_tRNA-Ala1" FT tRNA complement(300165..300242) FT /locus_tag="TGAM_r006" FT /product="tRNA-Ala" FT /note="codon recognized: GCG" FT gene 300588..302198 FT /locus_tag="TGAM_0317" FT /note="tg0317" FT CDS 300588..302198 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0317" FT /product="Coenzyme A transferase" FT /db_xref="GOA:C5A3K7" FT /db_xref="InterPro:IPR004165" FT /db_xref="InterPro:IPR014388" FT /db_xref="UniProtKB/TrEMBL:C5A3K7" FT /inference="protein motif:CDD:AtoA, Acyl FT CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid FT metabolism]" FT /inference="protein motif:CDD:AtoD, Acyl FT CoA:acetate/3-ketoacid CoA transferase, alpha subunit FT [Lipid metabolism]" FT /inference="protein motif:CDD:CoA_trans, Coenzyme A FT transferase" FT /inference="protein motif:CDD:COG4670, Acyl FT CoA:acetate/3-ketoacid CoA transferase [Lipid metabolism]" FT /inference="protein motif:COG:COG4670 Acyl FT CoA:acetate/3-ketoacid CoA transferase; I Lipid transport FT and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.810.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR13707 FT ACETYL-COA:ACETOACETYL-COA TRANSFERASE-RELATED FT InterPro:IPR004165 Coenzyme A transferase GO:Biological FT Process:metabolism (GO:0008152), Molecular FT Function:CoA-transferase activity (GO:0008410)" FT /inference="protein motif:HMMPanther:PTHR13707:SF10 FT ACETYL-COA:ACETOACETYL-COA TRANSFERASE-RELATED" FT /inference="protein motif:HMMPfam:PF01144 CoA_trans FT InterPro:IPR004165 Coenzyme A transferase GO:Biological FT Process:metabolism (GO:0008152), Molecular FT Function:CoA-transferase activity (GO:0008410)" FT /inference="protein motif:superfamily:SSF53316 CoA FT transferase" FT /protein_id="ACS32819.1" FT /translation="MGMKVVESTVAVQAVPDRAVIAVSGFNLLVAPEYLLLKLFERYRK FT TGHPKGIFLEVNPIPTAPGRVLDRILEELYRDEDQDFLAGMLVTYPGWSPYLQKLIEEN FT KIEGYTWSIGTASWFFREVSRGLPGVLTKVGLGTFLDPREDGGYLNELARKKKRCRIDV FT VEIDGEEYLFYRAPKPNVALIRGTTADEIGNVTTEKEGAFTEILNLAQAAKAEPGKGIV FT IAQVERVARYPSLNPQNVRVPGPLVDYVVVSPEEYHRQSANITYDPRISGEVIPPLKGG FT ETMELSTKKVIARRILLEMINLVKRLKRPVLVNLGIGIPDRIAGVAIEEGLSEWVFTTV FT ESGPFGGIALGGPDFGASIGPFAIISQPDQFANYEGGVIDAASLGFMQVDERGNVNPSL FT LPGRLPGPGGFPVISYGSPRMFFAGHFTAGKKELRVRNGRLEIIREGNVRKFVRRVYKV FT VYNASLGLEKGQEVVYITERAVFRLTRKGLVLEEYAPGVDVERDILANMEFEPLISPKL FT REMDERIFGEEPMGLGEEL" FT gene complement(302195..302704) FT /gene="ttdB" FT /locus_tag="TGAM_0318" FT /note="tg0318" FT CDS complement(302195..302704) FT /codon_start=1 FT /transl_table=11 FT /gene="ttdB" FT /locus_tag="TGAM_0318" FT /product="Fumarate hydratase class I, C-terminal domain FT (ttdB)" FT /EC_number="4.2.1.2" FT /db_xref="GOA:C5A3K8" FT /db_xref="InterPro:IPR004647" FT /db_xref="UniProtKB/TrEMBL:C5A3K8" FT /inference="protein motif:CDD:FumA, Tartrate dehydratase FT beta subunit/Fumarate hydratase class I, C-terminal domain FT [Energy production and conversion]" FT /inference="protein motif:CDD:Fumerase_C, Fumarase FT C-terminus" FT /inference="protein motif:COG:COG1838 Tartrate dehydratase FT beta subunit/Fumarate hydratase class I, C-terminal domain; FT C Energy production and conversion" FT /inference="protein motif:HMMPfam:PF05683 Fumerase_C FT InterPro:IPR004647 Fe-S type hydro-lyases tartrate/fumarate FT beta region GO:Molecular Function:lyase activity FT (GO:0016829)" FT /inference="protein motif:HMMTigr:TIGR00723 FT ttdB_fumA_fumB:hydro-lyases, Fe-S typ InterPro:IPR004647 FT Fe-S type hydro-lyases tartrate/fumarate beta region FT GO:Molecular Function:lyase activity (GO:0016829)" FT /protein_id="ACS32820.1" FT /translation="MRLRTPLSMEDVLRLKAGDVVYLSGEIVTARDSAHRRILSLPKEG FT LPFNPEGAVIYHCGPVVRKTHGSYEIVSAGPTTSARMNLYLDGVLDLGVRGIIGKGGMK FT AEPFRGRAVYFAFTGGAGSLAAKSIKRVRAVHWLDLGIPEALWVLEVEDFPLLVAIDAH FT GNSLYR" FT gene complement(302701..303552) FT /gene="ttdA" FT /locus_tag="TGAM_0319" FT /note="tg0319" FT CDS complement(302701..303552) FT /codon_start=1 FT /transl_table=11 FT /gene="ttdA" FT /locus_tag="TGAM_0319" FT /product="Fumarate hydratase class I, N-terminal domain FT (ttdA)" FT /EC_number="4.2.1.2" FT /db_xref="GOA:C5A3K9" FT /db_xref="InterPro:IPR004646" FT /db_xref="UniProtKB/TrEMBL:C5A3K9" FT /inference="protein motif:CDD:Fumerase, Fumarate hydratase FT (Fumerase)" FT /inference="protein motif:COG:COG1951 Tartrate dehydratase FT alpha subunit/Fumarate hydratase class I, N-terminal FT domain; C Energy production and conversion" FT /inference="protein motif:HMMPfam:PF05681 Fumerase FT InterPro:IPR004646 Fe-S type hydro-lyases tartrate/fumarate FT alpha region GO:Molecular Function:lyase activity FT (GO:0016829)" FT /inference="protein motif:HMMTigr:TIGR00722 FT ttdA_fumA_fumB:hydro-lyases, Fe-S typ InterPro:IPR004646 FT Fe-S type hydro-lyases tartrate/fumarate alpha region FT GO:Molecular Function:lyase activity (GO:0016829)" FT /protein_id="ACS32821.1" FT /translation="MIEAIVEAIRLAVTRIPDDVVSALREAYEREDNGVARFNLENILR FT AVEIGRTESIPVCQDTGTLTFFVRAGVGSPFLGELRGWLIEATRLAMEKVPLRPNAVDV FT LTGKNSGDNTGRGAPIVHWELTEGDEIEMAVLPKGGGSENCSALAMLTPGEGWEGVKRF FT VVERVKACGGKPCPPVVLGIGVGGGADYSLLLAKKALLRRVGERNPDERIAEIEGELLE FT EVNALGVGPMGMGGKTTALDVKIEVAHRHPASFPVGLIVQCWANRRAFVRIKPDGRVEV FT RQ" FT gene complement(303778..304692) FT /gene="serA" FT /locus_tag="TGAM_0320" FT /note="tg0320" FT CDS complement(303778..304692) FT /codon_start=1 FT /transl_table=11 FT /gene="serA" FT /locus_tag="TGAM_0320" FT /product="D-3-phosphoglycerate dehydrogenase, putative FT (serA)" FT /EC_number="1.1.1.95" FT /db_xref="GOA:C5A3L0" FT /db_xref="InterPro:IPR006139" FT /db_xref="InterPro:IPR006140" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A3L0" FT /inference="protein motif:CDD:2-Hacid_dh, D-isomer specific FT 2-hydroxyacid dehydrogenase, catalytic domain" FT /inference="protein motif:CDD:2-Hacid_dh_C, D-isomer FT specific 2-hydroxyacid dehydrogenase, NAD binding domain" FT /inference="protein motif:CDD:LdhA, Lactate dehydrogenase FT and related dehydrogenases [Energy production and FT conversion / Coenzyme metabolism / General function FT prediction only]" FT /inference="protein motif:CDD:SerA, Phosphoglycerate FT dehydrogenase and related dehydrogenases [Amino acid FT transport and metabolism]" FT /inference="protein motif:COG:COG0111 Phosphoglycerate FT dehydrogenase and related dehydrogenases; H Coenzyme FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPanther:PTHR10996 FT 2-HYDROXYACID DEHYDROGENASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10996:SF73 FT GLYCERATE DEHYDROGENASE-RELATED" FT /inference="protein motif:HMMPfam:PF00389 2-Hacid_dh FT InterPro:IPR006139 D-isomer specific 2-hydroxyacid FT dehydrogenase, catalytic region GO:Biological FT Process:metabolism (GO:0008152), Molecular FT Function:oxidoreductase activity, acting on the CH-OH group FT of donors, NAD or NADP as acceptor (GO:0016616), Molecular FT Function:NAD binding (GO:0051287)" FT /inference="protein motif:HMMPfam:PF02826 2-Hacid_dh_C FT InterPro:IPR006140 D-isomer specific 2-hydroxyacid FT dehydrogenase, NAD-binding GO:Biological Process:L-serine FT biosynthesis (GO:0006564), Molecular FT Function:oxidoreductase activity, acting on the CH-OH group FT of donors, NAD or NADP as acceptor (GO:0016616)" FT /inference="protein motif:ScanRegExp:PS00065 FT D_2_HYDROXYACID_DH_1 InterPro:IPR006140 D-isomer specific FT 2-hydroxyacid dehydrogenase, NAD-binding GO:Biological FT Process:L-serine biosynthesis (GO:0006564), Molecular FT Function:oxidoreductase activity, acting on the CH-OH group FT of donors, NAD or NADP as acceptor (GO:0016616)" FT /inference="protein motif:ScanRegExp:PS00670 FT D_2_HYDROXYACID_DH_2 InterPro:IPR006140 D-isomer specific FT 2-hydroxyacid dehydrogenase, NAD-binding GO:Biological FT Process:L-serine biosynthesis (GO:0006564), Molecular FT Function:oxidoreductase activity, acting on the CH-OH group FT of donors, NAD or NADP as acceptor (GO:0016616)" FT /inference="protein motif:ScanRegExp:PS00671 FT D_2_HYDROXYACID_DH_3 InterPro:IPR006140 D-isomer specific FT 2-hydroxyacid dehydrogenase, NAD-binding GO:Biological FT Process:L-serine biosynthesis (GO:0006564), Molecular FT Function:oxidoreductase activity, acting on the CH-OH group FT of donors, NAD or NADP as acceptor (GO:0016616)" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /inference="protein motif:superfamily:SSF52283 FT Formate/glycerate dehydrogenase catalytic domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32822.1" FT /translation="MKVLVAAPLHEKALEVLKKAGFEILYEEYPDEERLVELVRDVDAI FT IVRSKPKVTRRVIENAPKLKVIGRAGVGLDNIDLEAAKERGIKVVNSPGASSRSVAELV FT FGLLFAVARKVAFADRKMREGVWAKKQCMGIELEGKTIGIIGFGRIGYQVAKIAKAFEM FT NVLLYDPYPNEERAKEVGGRFTSLEELLRESDVVTLHVPLIDATYHLINEERLKLMKKT FT AILINAARGAVVDTEALVKALQEGWIYGAGLDVFEEEPLSKDHPLTKLDNVVLTPHIGA FT STEEAQMRAGVQVAEQIVEILKG" FT gene complement(304697..305344) FT /locus_tag="TGAM_0321" FT /note="tg0321" FT CDS complement(304697..305344) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0321" FT /product="Phosphate transport regulator, putative" FT /note="Belongs to DUF47 family, PhoU/Pit related" FT /db_xref="InterPro:IPR002727" FT /db_xref="InterPro:IPR018445" FT /db_xref="UniProtKB/TrEMBL:C5A3L1" FT /inference="protein motif:BlastProDom:PD007581 FT Q97VZ1_SULSO_Q97VZ1; InterPro:IPR002727 Protein of unknown FT function DUF47" FT /inference="protein motif:CDD:COG1392, Phosphate transport FT regulator (distant homolog of PhoU) [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:CDD:PhoU_div, Protein of unknown FT function DUF47" FT /inference="protein motif:COG:COG1392 Phosphate transport FT regulator (distant homolog of PhoU); P Inorganic ion FT transport and metabolism" FT /inference="protein motif:HMMPfam:PF01865 PhoU_div FT InterPro:IPR002727 Protein of unknown function DUF47" FT /inference="protein motif:HMMTigr:TIGR00153 FT TIGR00153:conserved hypothetical protein T FT InterPro:IPR002727 Protein of unknown function DUF47" FT /inference="protein motif:superfamily:SSF47661 t-snare FT proteins InterPro:IPR010989 t-snare" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32823.1" FT /translation="MAIFGGKENDVFKALNDHLEVVHETLKAFRALVESYLAGRINEAE FT KFEREVSELETKADKLRRSIEMMLYEGAFLPANRGDYVRLSELVDQVADAAESAAHTII FT LAKPRVPGELSGEFLALVDSGIDTYEKLMKAVKALNTDVDRAMDLAKQVEDAEEKADEI FT EYNLKKHVFESEEITTYAKIIWNQIITKIGDIADRAEDASDQVLLMSVKRRG" FT gene complement(305347..306276) FT /gene="panE" FT /locus_tag="TGAM_0322" FT /note="tg0322" FT CDS complement(305347..306276) FT /codon_start=1 FT /transl_table=11 FT /gene="panE" FT /locus_tag="TGAM_0322" FT /product="2-dehydropantoate reductase (panE)" FT /EC_number="1.1.1.169" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A3L2" FT /db_xref="InterPro:IPR003710" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR013332" FT /db_xref="InterPro:IPR013752" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A3L2" FT /inference="protein motif:CDD:ApbA, Ketopantoate reductase FT PanE/ApbA" FT /inference="protein motif:CDD:ApbA, Ketopantoate reductase FT [Coenzyme metabolism]" FT /inference="protein motif:COG:COG1893 Ketopantoate FT reductase; H Coenzyme transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPfam:PF02558 ApbA FT InterPro:IPR013332 Ketopantoate reductase ApbA/PanE, FT N-terminal" FT /inference="protein motif:HMMPfam:PF08546 ApbA_C FT InterPro:IPR013752 Ketopantoate reductase ApbA/PanE, FT C-terminal" FT /inference="protein motif:HMMTigr:TIGR00745 FT apbA_panE:2-dehydropantoate 2-reductase InterPro:IPR003710 FT Ketopantoate reductase ApbA/PanE GO:Biological FT Process:pyrimidine base metabolism (GO:0006206), Molecular FT Function:2-dehydropantoate 2-reductase activity FT (GO:0008677)" FT /inference="protein motif:superfamily:SSF48179 FT 6-phosphogluconate dehydrogenase C-terminal domain-like FT InterPro:IPR008927 6-phosphogluconate dehydrogenase, FT C-terminal-like" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32824.1" FT /translation="MRIYVLGAGSIGSLLGALLAKAGNDVLLIGREEQVRAVNERRLKV FT IGVEEFEVKVNASLHAPDEPPELLLLTTKSYSTKTALECARNCIGPETWVLSVQNGLGN FT EDLAMKYTDRVIGGITTNGAMLVEWGVVRWTGKGITVIGKYPTGKAEFVERVARVFNEA FT GIETEVTENAVGWKWAKAIVNSVINGLGTVLEVKNGALREIPELEGISIEIAREGCMVA FT QQLGIEFEVHPLELLWDTIERTRENYNSTLQDIMRGRKTEVDYIHGKIVEYAHSVGLEA FT PRNELLWALIKAKEGKIDKPNFRNIFGG" FT gene complement(306281..306835) FT /locus_tag="TGAM_0323" FT /note="tg0323" FT CDS complement(306281..306835) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0323" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3L3" FT /protein_id="ACS32825.1" FT /translation="MRNRNELIPFAAGIVLAAYLVQRVPTEAVKYLVPYALLLIPGIKR FT KSLPFAASSLFALAFLEWLLVHDYIAIIVMGMALLETPIRMGKQPVKLWERVINVIVAG FT AVAYVSVISPETAFKIVGVLTAIGLLSSNRSISGGALVTASAFFVGIALSGTSDMNPDL FT FIGVGALLLLYSLNHLRKLLR" FT gene 306856..307587 FT /gene="spoU" FT /gene_synonym="trmH" FT /locus_tag="TGAM_0324" FT /note="tg0324" FT CDS 306856..307587 FT /codon_start=1 FT /transl_table=11 FT /gene="spoU" FT /gene_synonym="trmH" FT /locus_tag="TGAM_0324" FT /product="RNA methyltransferase (spoU/TrmH)" FT /note="Belongs to trmH/spoU family of rRNA methylases" FT /db_xref="GOA:C5A3L4" FT /db_xref="InterPro:IPR001537" FT /db_xref="InterPro:IPR004384" FT /db_xref="UniProtKB/TrEMBL:C5A3L4" FT /inference="protein motif:BlastProDom:PD001243 FT Q8RD01_THETN_Q8RD01; InterPro:IPR001537 tRNA/rRNA FT methyltransferase, SpoU GO:Molecular Function:RNA binding FT (GO:0003723), Biological Process:RNA processing FT (GO:0006396), Molecular Function:RNA methyltransferase FT activity (GO:0008173)" FT /inference="protein motif:CDD:CspR, Predicted rRNA FT methylase (SpoU class) [Translation, ribosomal structure FT and biogenesis]" FT /inference="protein motif:CDD:LasT, rRNA methylase FT [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:CDD:SpoU_methylase, SpoU rRNA FT Methylase family" FT /inference="protein motif:COG:COG0565 rRNA methylase; J FT Translation, ribosomal structure and biogenesis" FT /inference="protein motif:HMMPfam:PF00588 SpoU_methylase FT InterPro:IPR001537 tRNA/rRNA methyltransferase, SpoU FT GO:Molecular Function:RNA binding (GO:0003723), Biological FT Process:RNA processing (GO:0006396), Molecular Function:RNA FT methyltransferase activity (GO:0008173)" FT /inference="protein motif:HMMTigr:TIGR00050 FT rRNA_methyl_1:RNA methyltransferase, T InterPro:IPR004384 FT RNA methyltransferase TrmH, group 1 GO:Molecular FT Function:RNA methyltransferase activity (GO:0008173)" FT /inference="protein motif:superfamily:SSF75217 alpha/beta FT knot" FT /protein_id="ACS32826.1" FT /translation="MHLSLNPFVMMPSVVLVEPEGPANIGMVARTMKNFGFSRLVLVNP FT NLSEESYSYAVHARDVLKNATIVETFEEALELFDLTVGTTGKPGRRFISYRAPLYPWEL FT RETLKGYTGEVGLFFGRESIGLKNEELERLDLIVTIPTSEDYPVMNLAQAVAVILYELS FT KTRPEPSVEALKPATRDEKEALVRVWAELLKVLEYPKDEERREVFVKVFRKAVGKAFLY FT GREVHTLIGPLRRAVKRLEEC" FT gene 307588..308112 FT /gene="ogt" FT /locus_tag="TGAM_0325" FT /note="tg0325" FT CDS 307588..308112 FT /codon_start=1 FT /transl_table=11 FT /gene="ogt" FT /locus_tag="TGAM_0325" FT /product="Methylated-DNA--protein-cysteine FT methyltransferase (ogt)" FT /EC_number="2.1.1.63" FT /db_xref="GOA:C5A3L5" FT /db_xref="InterPro:IPR001497" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR014048" FT /db_xref="InterPro:IPR015236" FT /db_xref="InterPro:IPR023546" FT /db_xref="UniProtKB/Swiss-Prot:C5A3L5" FT /inference="protein motif:CDD:Ada, Methylated DNA-protein FT cysteine methyltransferase [DNA replication, recombination, FT and repair]" FT /inference="protein motif:CDD:Methyltransf_1, FT 6-O-methylguanine DNA methyltransferase, DNA binding FT domain" FT /inference="protein motif:COG:COG0350 Methylated FT DNA-protein cysteine methyltransferase; L Replication, FT recombination and repair" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:Gene3D:G3D.3.30.160.70 no FT description" FT /inference="protein motif:HMMPanther:PTHR10815 FT METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR10815:SF1 FT METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF01035 DNA_binding_1 FT InterPro:IPR001497 Methylated-DNA-[protein]-cysteine FT S-methyltransferase GO:Molecular FT Function:methylated-DNA-[protein]-cysteine FT S-methyltransferase activity (GO:0003908), Biological FT Process:DNA repair (GO:0006281)" FT /inference="protein motif:HMMTigr:TIGR00589 FT ogt:methylated-DNA-[protein]-cysteine S-met FT InterPro:IPR001497 Methylated-DNA-[protein]-cysteine FT S-methyltransferase GO:Molecular FT Function:methylated-DNA-[protein]-cysteine FT S-methyltransferase activity (GO:0003908), Biological FT Process:DNA repair (GO:0006281)" FT /inference="protein motif:ScanRegExp:PS00374 MGMT FT InterPro:IPR001497 Methylated-DNA-[protein]-cysteine FT S-methyltransferase GO:Molecular FT Function:methylated-DNA-[protein]-cysteine FT S-methyltransferase activity (GO:0003908), Biological FT Process:DNA repair (GO:0006281)" FT /inference="protein motif:superfamily:SSF46894 C-terminal FT effector domain of the bipartite response regulators" FT /inference="protein motif:superfamily:SSF53155 Methylated FT DNA-protein cysteine methyltransferase domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32827.1" FT /translation="MLAVERFGVNGRDIWIGVIFHGRIQGISFAFTRGELLERIRNLAE FT FLRGRDVRVSLDVQPSNYTELVYRVLIGELENEKALPELSFEGVTPFERRVYEWLTKNV FT KRGTVITYGSLAKALETSPRAVGGAMKRNPYPIIVPCHRVVSREGIGHYNLGIEEKKFL FT LELEGVKEWTG" FT gene 308100..309119 FT /locus_tag="TGAM_0326" FT /note="tg0326" FT CDS 308100..309119 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0326" FT /product="TRP-repeat-containing protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3L6" FT /db_xref="InterPro:IPR011990" FT /db_xref="InterPro:IPR013026" FT /db_xref="InterPro:IPR019734" FT /db_xref="UniProtKB/TrEMBL:C5A3L6" FT /inference="protein motif:COG:COG0457 FOG:TPR repeat; R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.1.25.40.10 no FT description InterPro:IPR011990 Tetratricopeptide-like FT helical GO:Molecular Function:binding (GO:0005488)" FT /inference="protein motif:HMMPfam:PF07719 TPR_2 FT InterPro:IPR013105 Tetratricopeptide TPR_2" FT /inference="protein motif:HMMSmart:SM00028 no description FT InterPro:IPR013026 Tetratricopeptide region" FT /inference="protein motif:ProfileScan:PS50005 TPR FT InterPro:IPR013026 Tetratricopeptide region" FT /inference="protein motif:ProfileScan:PS50293 TPR_REGION FT InterPro:IPR013026 Tetratricopeptide region" FT /inference="protein motif:superfamily:SSF48452 TPR-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32828.1" FT /translation="MDRLKAYIIGFLIAVLAIAGFIVYEWGWVKLLQLILAVGFVGFTL FT ALLFFTALTLYAESWKYGAILAVLTAIAGYGSYLVLTWQKLEIVGGIIAFFILLFAFGI FT WYISEPDLSIADRFRSAEKLERMGRYKQAARKYEKAGNYEKAAEMYLKLGWLESAAWAY FT EKAGKYEKAAELYEKLYEKEKDTYYLKEAHEYWKKAGNMERAARALEKYAEEEPWFWED FT VAKLYEELGNEEKAREAWEKALEYYTKEAQEEGVFWEDVGNIARKLGREELAREAYQKF FT LEYCLKEAENDPMWWKHVAEAYEYLGEKEKAEEARKKYEEYRQRILKANEETSQFPEN" FT gene 309460..309798 FT /gene="nac" FT /locus_tag="TGAM_0327" FT /note="tg0327" FT CDS 309460..309798 FT /codon_start=1 FT /transl_table=11 FT /gene="nac" FT /locus_tag="TGAM_0327" FT /product="Nascent polypeptide-associated complex protein FT (nac)" FT /db_xref="GOA:C5A3L7" FT /db_xref="InterPro:IPR000449" FT /db_xref="InterPro:IPR002715" FT /db_xref="InterPro:IPR005231" FT /db_xref="InterPro:IPR009060" FT /db_xref="UniProtKB/TrEMBL:C5A3L7" FT /inference="protein motif:CDD:EGD2, Transcription factor FT homologous to NACalpha-BTF3 [Transcription]" FT /inference="protein motif:COG:COG1308 Transcription factor FT homologous to NACalpha-BTF3; K Transcription" FT /inference="protein motif:HMMPfam:PF00627 UBA FT InterPro:IPR000449 Ubiquitin-associated" FT /inference="protein motif:HMMPfam:PF01849 NAC FT InterPro:IPR002715 Nascent polypeptide-associated complex FT NAC" FT /inference="protein motif:HMMTigr:TIGR00264 FT TIGR00264:alpha-NAC homolog InterPro:IPR005231 FT Alpha-NAC-related protein" FT /inference="protein motif:superfamily:SSF46934 UBA-like FT InterPro:IPR009060 UBA-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32829.1" FT /translation="MMGMNPRQMKKLMKQLGIKMEELEGVKEVVLKLEGKEIVLRNPVV FT TVMVVQGEKTYQIVPGSEEVREVIEIPEEDIELVMEQAGVDRETALKALKETKGDIAEA FT ILQLTEGS" FT gene complement(309775..311292) FT /locus_tag="TGAM_0328" FT /note="tg0328" FT CDS complement(309775..311292) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0328" FT /product="Conserved hypothetical protein" FT /note="Contains ARM repeat (SSF48371)" FT /db_xref="GOA:C5A3L8" FT /db_xref="InterPro:IPR011989" FT /db_xref="InterPro:IPR016024" FT /db_xref="UniProtKB/TrEMBL:C5A3L8" FT /inference="protein motif:Gene3D:G3D.1.25.10.10 no FT description InterPro:IPR011989 Armadillo-like helical FT GO:Molecular Function:binding (GO:0005488)" FT /inference="protein motif:HMMPfam:PF02985 HEAT FT InterPro:IPR000357 HEAT" FT /inference="protein motif:superfamily:SSF48371 ARM repeat" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32830.1" FT /translation="MQKEEVIIEKSGIREDLLSWNIKEVVALAENYDEAFHIVKELLRD FT KNPIVKTNALQVIKEMIKRGTLDRRKVTEVVEDIVELAKDKDERVSLKAIEVLNLLLEK FT EELDENQYELVTDALMDIIKRGAPLLSEYASEGLGKAGAKVLKLARKLIGWLFSLIKSS FT KDRQVQSAAIAALTEMAARTEDKRIFNEIFDNMADLLDHIDPYIQERALLALDRMLSRA FT EILTKRNKIKAMKKIREISNDVRLASKASLILEKLEKISGEEEEILTKQELKKKLEISE FT YGPDDVERLLDAGKTDIVAELAKIDPIVMSMILEMLHSDDPVRRMDALWVLSKVTSQLT FT PTDAYSVLPVLAEFLKSRNPWARKTAAETMADIYSLYPGTAQFFTSLLDVLLRSSRDAD FT VEGALELIFSLQHRLPTPEFEMAMVSILSDLLRRKETRAVTLRFMAREAQRLMDFDYEG FT LIQLENALKEIYGDEGGKYDNIIASLIDLIEDLIKLKKKESGSLGQL" FT gene complement(311345..312037) FT /gene="pyrK" FT /locus_tag="TGAM_0329" FT /note="tg0329" FT CDS complement(311345..312037) FT /codon_start=1 FT /transl_table=11 FT /gene="pyrK" FT /locus_tag="TGAM_0329" FT /product="Dihydroorotate dehydrogenase electron transfer FT subunit (pyrK)" FT /db_xref="GOA:C5A3L9" FT /db_xref="InterPro:IPR000951" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR008333" FT /db_xref="InterPro:IPR012165" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="InterPro:IPR019480" FT /db_xref="UniProtKB/TrEMBL:C5A3L9" FT /inference="protein motif:CDD:COG4097, Predicted ferric FT reductase [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:Hmp, Flavodoxin reductases FT (ferredoxin-NADPH reductases) family 1 [Energy production FT and conversion]" FT /inference="protein motif:CDD:UbiB, 2-polyprenylphenol FT hydroxylase and related flavodoxin oxidoreductases FT [Coenzyme metabolism / Energy production and conversion]" FT /inference="protein motif:COG:COG0543 2-polyprenylphenol FT hydroxylase and related flavodoxin oxidoreductases; H FT Coenzyme transport and metabolism" FT /inference="protein motif:FPrintScan:PR00409 PHDIOXRDTASE FT InterPro:IPR000951 Phthalate dioxygenase reductase FT GO:Biological Process:electron transport (GO:0006118), FT Molecular Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:Gene3D:G3D.2.10.240.10 no FT description" FT /inference="protein motif:Gene3D:G3D.2.40.30.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.80 no FT description" FT /inference="protein motif:HMMPanther:PTHR19370 NITRATE FT REDUCTASE" FT /inference="protein motif:HMMPfam:PF00175 NAD_binding_1 FT InterPro:IPR001433 Oxidoreductase FAD/NAD(P)-binding FT GO:Biological Process:electron transport (GO:0006118), FT Molecular Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:HMMPfam:PF00970 FAD_binding_6 FT InterPro:IPR008333 Oxidoreductase FAD-binding region FT GO:Biological Process:electron transport (GO:0006118), FT Molecular Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:HMMPIR:PIRSF006816 Cytochrome-c3 FT hydrogenase, gamma subunit InterPro:IPR012165 Cytochrome-c3 FT hydrogenase, gamma subunit GO:Molecular Function:iron ion FT binding (GO:0005506), Biological Process:electron transport FT (GO:0006118), Biological Process:pyrimidine nucleotide FT biosynthesis (GO:0006221), Molecular Function:FAD binding FT (GO:0050660)" FT /inference="protein motif:ScanRegExp:PS00197 2FE2S_FER_1 FT InterPro:IPR006058 2Fe-2S ferredoxin, iron-sulfur binding FT site GO:Molecular Function:electron transporter activity FT (GO:0005489), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:superfamily:SSF52343 Ferredoxin FT reductase-like, C-terminal NADP-linked domain" FT /inference="protein motif:superfamily:SSF63380 Riboflavin FT synthase domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32831.1" FT /translation="MVELRETWEVAKNVRAFRLSKGFDFTPGQFVMVWLPGVGEKPFSL FT AWKDLLVIKRVGPFTSRLFELQEGDRLWIRGPYGRGFERKWNRVALVSGGIGIPPLYAL FT VRAWRNEFEGITLIYGARSKEELALLDIEDYVDEVVITTDDGSAGKKGFPTDVLAERRG FT EFDGVYACGPEPMLKAVLRIMDYENVQVSAERYMKCGIGVCGSCNLGKYLVCRDGPVFE FT GEKLRGVM" FT gene complement(312030..313253) FT /gene="pyrC" FT /locus_tag="TGAM_0330" FT /note="tg0330" FT CDS complement(312030..313253) FT /codon_start=1 FT /transl_table=11 FT /gene="pyrC" FT /locus_tag="TGAM_0330" FT /product="Dihydroorotase (pyrC)" FT /EC_number="3.5.2.3" FT /db_xref="GOA:C5A3M0" FT /db_xref="InterPro:IPR002195" FT /db_xref="InterPro:IPR004722" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="UniProtKB/TrEMBL:C5A3M0" FT /inference="protein motif:BlastProDom:PD000518 FT Q893N3_CLOTE_Q893N3; InterPro:IPR005847 Dihydroorotase FT region" FT /inference="protein motif:CDD:Amidohydro_1, Amidohydrolase FT family" FT /inference="protein motif:CDD:CAD_DHOase, The eukaryotic FT CAD protein is a trifunctional enzyme of carbamoylphosphate FT synthetase-aspartate transcarbamoylase-dihydroorotase, FT which catalyzes the first three steps of de novo pyrimidine FT nucleotide biosynthesis" FT /inference="protein motif:CDD:Cyclic_amidohydrolases, FT Cyclic amidohydrolases, including hydantoinase, FT dihydropyrimidinase, allantoinase, and dihydroorotase, are FT involved in the metabolism of pyrimidines and purines, FT sharing the property of hydrolyzing the cyclic amide bond FT of each substrate to the corresponding N-carbamyl amino FT acids" FT /inference="protein motif:CDD:D-HYD, D-hydantoinases FT (D-HYD) also called dihydropyrimidases (DHPase) and related FT proteins" FT /inference="protein motif:CDD:DHOase, Dihydroorotase FT (DHOase) catalyzes the reversible interconversion of FT carbamoyl aspartate to dihydroorotate, a key reaction in FT the pyrimidine biosynthesis" FT /inference="protein motif:CDD:DHOase_IIa, Dihydroorotase FT (DHOase), subgroup IIa" FT /inference="protein motif:CDD:DHOase_IIb, Dihydroorotase FT (DHOase), subgroup IIb" FT /inference="protein motif:CDD:L-HYD_ALN, L-Hydantoinases FT (L-HYDs) and Allantoinase (ALN)" FT /inference="protein motif:CDD:PyrC, Dihydroorotase and FT related cyclic amidohydrolases [Nucleotide transport and FT metabolism]" FT /inference="protein motif:CDD:PyrC, Dihydroorotase FT [Nucleotide transport and metabolism]" FT /inference="protein motif:COG:COG0044 Dihydroorotase and FT related cyclic amidohydrolases; F Nucleotide transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.20.140 no FT description" FT /inference="protein motif:HMMPanther:PTHR11647 FT DIHYDROOROTASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11647:SF13 FT DIHYDROOROTASE-RELATED" FT /inference="protein motif:HMMPfam:PF01979 Amidohydro_1 FT InterPro:IPR006680 Amidohydrolase 1 GO:Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:HMMTigr:TIGR00857 FT pyrC_multi:dihydroorotase, multifunctiona FT InterPro:IPR004722 Dihydroorotase multifunctional complex FT type" FT /inference="protein motif:ScanRegExp:PS00483 FT DIHYDROOROTASE_2 InterPro:IPR002195 Dihydroorotase FT GO:Molecular Function:hydrolase activity, acting on FT carbon-nitrogen (but not peptide) bonds, in cyclic amides FT (GO:0016812)" FT /inference="protein motif:superfamily:SSF51338 Composite FT domain of metallo-dependent hydrolases InterPro:IPR011059 FT Metallo-dependent hydrolase, composite" FT /inference="protein motif:superfamily:SSF51556 FT Metallo-dependent hydrolases" FT /protein_id="ACS32832.1" FT /translation="MHELVLTGKFTLKGEVVRGSIGIDEGRISAIYARKIPGEETIDLS FT QYLILPGLIDTHVHLRDFEQKEKETVESGTKAALHGGITAVLDMPNTKPPVMDSKTFEK FT RLELFQRKAYTDYALGFLIRSNCEEARKAGADFYKAFMGASTGGIYSGDFEGDYACSPG FT VLSVHAEDAELIRENPERPSRAEEVAIKRALESAEKLKKPLNICHVSTRGGIEAILQRN FT LPWVSFEVTPHHLFLTREDYKRNPLLKVYPPLRTEEHVKALWENFSRIPIIASDHAPHT FT VEDKEAGTAGIPGLETEVALLLDAANRGIISVFDIVKKMHDNPVKVFGIRGRDFAIGNE FT ATFTVVDLKREWTVKPEELYTKAKWSPWEGRKLKGKVVMTILRGRVVMEDGEIVGKPEG FT VRLNVQRG" FT gene 313402..315939 FT /locus_tag="TGAM_0331" FT /note="tg0331" FT CDS 313402..315939 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0331" FT /product="Solute binding protein, putative" FT /note="Contains Periplasmic binding protein-like II domain FT (SSF53850); 2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3M1" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:C5A3M1" FT /inference="protein motif:CDD:COG3889, Predicted solute FT binding protein [General function prediction only]" FT /inference="protein motif:COG:COG3889 Predicted solute FT binding protein; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.10.105.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.190.10 no FT description" FT /inference="protein motif:HMMPfam:PF00496 SBP_bac_5 FT InterPro:IPR000914 Bacterial extracellular solute-binding FT protein, family 5 GO:Molecular Function:transporter FT activity (GO:0005215), Biological Process:transport FT (GO:0006810)" FT /inference="protein motif:superfamily:SSF53850 Periplasmic FT binding protein-like II" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32833.1" FT /translation="MYKLMLPWPREGRLAKTERRQWNMNRKVFSLFIIGLMVFSVFFVR FT PAAAYSDDDYIKFALQAFETKYYKTAEDLDGILDMTLDDSAYLTSYFTHEFNNKTFDVT FT NPDQFWDLAKINMGLGIFESPRVFLVETWTFFPANKERVKEIVSDPNVGLGTRWSPMTA FT KTPDGKLKIAQFASTGAMFMSAFNPVGGLNDVYSVRVSTLVTDYGGATNFDGIYSPYRC FT TWEIDKTPGKVPDDAVIYNQTQGWIAAHKGEDYKVKVTYTCDVGEWHNGVKGSIDDIKN FT YIAFYYAWAYEDYPGDPYYDEGLSSTAAGLQNILGFEFTDNGYTVYGKYVHPLADDQIA FT AYYMFYPSLPWELYWAMGELVANSKKYGIDKTYSFSSSGEGILWLDLLTKEHDQDIIKI FT MDAIMNGDFKGNVTDIDWNAATDRFNADKQFFNNYGNLFISNGPYKLVKYDPNALYLKL FT EKFTGERNVLGKDSGLPIDPVPDVIEYIGVQGQETVILQIAKGEYDIGMFAFPSGVYSG FT LGEDVISKLKLFKSASSYNELTVNDWHDPDKDAPIVTVGDNVYFNPFAVREIRYALNWL FT VSRDYIVQNIYQGSGKAMLGCIRPSHPADKYFEPVYQALGMSTAGDEDYALYLLNEGME FT KAKEQVAKYGHTLERKADGYWYFDGKPVTIKFIIRIEDERKEIGLYVSKLLEDKFGFKV FT EKLLWDRKKAGAVVFAEDPANYKWNLYTGGWGTSGLPSQWVDGYMAFFYTNWYGWTPNG FT MGPEHGHKNTVTVREFLTFVGKLNAPPETTTTTTTTTSGGGETTTTTSGGGETTTTTTT FT TTTTTTSEGGGGICGPAALIGLAIIPLLLRRRK" FT gene 316103..317146 FT /gene="dppB" FT /gene_synonym="oppB" FT /locus_tag="TGAM_0332" FT /note="tg0332" FT CDS 316103..317146 FT /codon_start=1 FT /transl_table=11 FT /gene="dppB" FT /gene_synonym="oppB" FT /locus_tag="TGAM_0332" FT /product="Dipeptide transport system permease protein dppB FT or oligopeptide transport system permease protein oppB FT (dppB/oppB)" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3M2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:C5A3M2" FT /inference="protein motif:CDD:BPD_transp_1, FT Binding-protein-dependent transport system inner membrane FT component" FT /inference="protein motif:CDD:COG4174, ABC-type FT uncharacterized transport system, permease component FT [General function prediction only]" FT /inference="protein motif:CDD:DppB, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:SapB, ABC-type antimicrobial FT peptide transport system, permease component [Defense FT mechanisms]" FT /inference="protein motif:COG:COG0601 ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components; E Amino acid transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32834.1" FT /translation="MGYGKYLVFRIINALIVLIIATFIMSALFVKVTIDQNEANMREAL FT RAWDQTTGKQIRQTLGDEVYKEKRKEYEKKLREQYNLDKGYWGQVLEKTWRSLKWDFGK FT SQLTIGGTNDVRKIILMYLPRSIILFTTASIITMILGIFLGVRAANNPGSLFDRSLSIF FT ALVTYSLPLWWTGMMFILIFAYKLGWFPLSSNFMPTDTIWDKIHKLALPILTYVFVAFG FT GWAWTTRNIMIGTLQEDFIMAARAKGLPERKVIYGHALRAAAPPIVTMVIFSLLGSLGG FT AIISEQVFQYPGMGMLYWQALNQSEVNIVIGLTYFSVVLYLAGVVLADMIYGFLDPRVK FT VGASAKM" FT gene 317158..318636 FT /gene="dppC" FT /gene_synonym="oppC" FT /locus_tag="TGAM_0333" FT /note="tg0333" FT CDS 317158..318636 FT /codon_start=1 FT /transl_table=11 FT /gene="dppC" FT /gene_synonym="oppC" FT /locus_tag="TGAM_0333" FT /product="Dipeptide transport system permease protein dppC FT or oligopeptide transport system permease protein oppC FT (dppC/oppC)" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3M3" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:C5A3M3" FT /inference="protein motif:CDD:BPD_transp_1, FT Binding-protein-dependent transport system inner membrane FT component" FT /inference="protein motif:CDD:COG4239, ABC-type FT uncharacterized transport system, permease component FT [General function prediction only]" FT /inference="protein motif:CDD:DppB, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:DppC, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:SapC, ABC-type antimicrobial FT peptide transport system, permease component [Defense FT mechanisms]" FT /inference="protein motif:COG:COG1173 ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components; E Amino acid transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:superfamily:SSF63999 Thiamin FT pyrophosphokinase, catalytic domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32835.1" FT /translation="MRWVDFKESLQDFVNEFKREKTGMLGLALLILLIIVAAAAPLITM FT PNFPEKWKDPQYWEEYPQTVPPTWYNKFTSHDLMGQVVYTSKDLQITRNGRTVEIKATY FT TLPEGYYDGPKGIIIKGFQLQKSGGTPFKPKMNIYLDRPDGKSVQLVNNKEVSSGITVA FT IGRDSEIAKNVYMWLYETTTGKTISPDEVPLSVILIQDMVRPLFAVVDPSAYKTSGNES FT VVEEIIMNPKPLHGTYTLRITIRDYPQAKVDVSNITVTFLGRVYGNMGTDYLGRDLWGA FT IVWGSRISLVIGITVSLLSTIIGLVYGVTSAYLGGNADEILMRINELFSSIPSLPILIL FT IGATLGHIRLSLIVVLLVVFGWMGVARISRSMALQIKEQTYIEAAKALGAGTGRIVFKH FT ILPQLLPYAFAVIALGVPVAVISEASLSFLGLGDPTQVTWGQILHDAQMKFAATKGYWW FT WVLPPGLGIALVGLTFVLIGTALDRILNPRLRRL" FT gene 318647..319606 FT /gene="dppD" FT /gene_synonym="oppD-1" FT /locus_tag="TGAM_0334" FT /note="tg0334" FT CDS 318647..319606 FT /codon_start=1 FT /transl_table=11 FT /gene="dppD" FT /gene_synonym="oppD-1" FT /locus_tag="TGAM_0334" FT /product="ABC-type dipeptide/oligopeptide transport system, FT ATPase component (dppD/oppD)" FT /db_xref="GOA:C5A3M4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010066" FT /db_xref="InterPro:IPR013563" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:C5A3M4" FT /inference="protein motif:BlastProDom:PD000006 FT Q9UXW0_PYRAB_Q9UXW0; InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:CDD:AbcC, ABC-type metal ion FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ABCC_ATM1_transporter, ATM1 FT is an ABC transporter that is expressed in the FT mitochondria" FT /inference="protein motif:CDD:ABCC_bacteriocin_exporters, FT ABC-type bacteriocin exporters" FT /inference="protein motif:CDD:ABCC_cytochrome_bd, The CYD FT subfamily implicated in cytochrome bd biogenesis" FT /inference="protein motif:CDD:ABCC_Glucan_exporter_like, FT Glucan exporter ATP-binding protein" FT /inference="protein motif:CDD:ABCC_Hemolysin, The FT ABC-transporter hemolysin B is a central component of the FT secretion machinery that translocates the toxin, hemolysin FT A, in a Sec-independent fashion across both membranes of E" FT /inference="protein motif:CDD:ABCC_MRP_domain1, Domain 1 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_domain2, Domain 2 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_Like, The MRP FT (Mutidrug Resistance Protein)-like transporters are FT involved in drug, peptide, and lipid export" FT /inference="protein motif:CDD:ABCC_MsbA, MsbA is an FT essential ABC transporter, closely related to eukaryotic FT MDR proteins" FT /inference="protein motif:CDD:ABCC_NFT1, Domain 2 of NFT1 FT (New full-length MRP-type transporter 1)" FT /inference="protein motif:CDD:ABCC_Protease_Secretion, This FT family represents the ABC component of the protease FT secretion system PrtD, a 60-kDa integral membrane protein FT sharing 37% identity with HlyB, the ABC component of the FT alpha-hemolysin secretion pathway, in the C-terminal FT domain" FT /inference="protein motif:CDD:ABCC_TAP, TAP, the FT Transporter Associated with Antigen Processing" FT /inference="protein motif:CDD:ABCF_EF-3, ABCF_EF-3 FT Elongation factor 3 (EF-3) is a cytosolic protein required FT by fungal ribosomes for in vitro protein synthesis and for FT in vivo growth" FT /inference="protein motif:CDD:ABCG_EPDR, ABCG transporters FT are involved in eye pigment (EP) precursor transport, FT regulation of lipid-trafficking mechanisms, and pleiotropic FT drug resistance (DR)" FT /inference="protein motif:CDD:ABCG_White, The White FT subfamily represents ABC transporters homologous to the FT Drosophila white gene, which acts as a dimeric importer for FT eye pigment precursors" FT /inference="protein motif:CDD:ABC_ATPase, ABC (ATP-binding FT cassette) transporter nucleotide-binding domain" FT /inference="protein motif:CDD:ABC_BcrA_bacitracin_resist, FT The BcrA subfamily represents ABC transporters involved in FT peptide antibiotic resistance" FT /inference="protein motif:CDD:ABC_Carb_Monos_I, This family FT represents the domain I of the carbohydrate uptake proteins FT that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Monos_II, This FT family represents domain II of the carbohydrate uptake FT proteins that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Solutes_like, ABC FT Carbohydrate and Solute Transporters-like subgroup" FT /inference="protein motif:CDD:ABC_CcmA_heme_exporter, CcmA, FT the ATP-binding component of the bacterial CcmAB FT transporter" FT /inference="protein motif:CDD:ABC_Class3, This class is FT comprised of all BPD (Binding Protein Dependent) systems FT that are largely represented in archaea and eubacteria and FT are primarily involved in scavenging solutes from the FT environment" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain1, FT Domain I of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain2, FT Domain II of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_CysA_sulfate_importer, FT Part of the ABC transporter complex cysAWTP involved in FT sulfate import" FT /inference="protein motif:CDD:ABC_DrrA, DrrA is the FT ATP-binding protein component of a bacterial exporter FT complex that confers resistance to the antibiotics FT daunorubicin and doxorubicin" FT /inference="protein motif:CDD:ABC_drug_resistance_like, FT ABC-type multidrug transport system, ATPase component" FT /inference="protein motif:CDD:ABC_DR_subfamily_A, This FT family of ATP-binding proteins belongs to a multisubunit FT transporter involved in drug resistance (BcrA and DrrA), FT nodulation, lipid transport, and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_FeS_Assembly, ABC-type FT transport system involved in Fe-S cluster assembly, ATPase FT component" FT /inference="protein motif:CDD:ABC_FtsE_transporter, FtsE is FT a hydrophilic nucleotide-binding protein that binds FtsX to FT form a heterodimeric ATP-binding cassette (ABC)-type FT transporter that associates with the bacterial inner FT membrane" FT /inference="protein motif:CDD:ABC_HisP_GlnQ_permeases, HisP FT and GlnQ are the ATP-binding components of the bacterial FT periplasmic histidine and glutamine permeases, repectively" FT /inference="protein FT motif:CDD:ABC_Iron-Siderophores_B12_Hemin, ABC FT transporters, involved in the uptake of siderophores, heme, FT and vitamin B12, are widely conserved in bacteria and FT archaea" FT /inference="protein motif:CDD:ABC_KpsT_Wzt, ABC_KpsT_Wzt FT The KpsT/Wzt ABC transporter subfamily is involved in FT extracellular polysaccharide export" FT /inference="protein motif:CDD:ABC_MalK_N, The N-terminal FT ATPase domain of the maltose transporter, MalK" FT /inference="protein motif:CDD:ABC_Metallic_Cations, ABC FT component of the metal-type transporters" FT /inference="protein FT motif:CDD:ABC_MetN_methionine_transporter, MetN (also known FT as YusC) is an ABC-type transporter encoded by metN of the FT metNPQ operon in Bacillus subtilis that is involved in FT methionine transport" FT /inference="protein motif:CDD:ABC_MJ0796_Lo1CDE_FtsE, This FT family is comprised of MJ0796 ATP-binding cassette, FT macrolide-specific ABC-type efflux carrier (MacAB), and FT proteins involved in cell division (FtsE), and release of FT liporoteins from the cytoplasmic membrane (LolCDE)" FT /inference="protein motif:CDD:ABC_Mj1267_LivG_branched, The FT Mj1267/LivG ABC transporter subfamily is involved in the FT transport of the hydrophobic amino acids leucine, FT isoleucine and valine" FT /inference="protein motif:CDD:ABC_ModC_like, Archeal FT protein closely related to ModC" FT /inference="protein FT motif:CDD:ABC_ModC_molybdenum_transporter, ModC is an FT ABC-type transporter and the ATPase component of a FT molybdate transport system that also includes the FT periplasmic binding protein ModA and the membrane protein FT ModB" FT /inference="protein motif:CDD:ABC_MTABC3_MDL1_MDL2, MTABC3 FT (also known as ABCB6) is a mitochondrial ATP-binding FT cassette protein involved in iron homeostasis and one of FT four ABC transporters expressed in the mitochondrial inner FT membrane, the other three being MDL1(ABC7), MDL2, and ATM1" FT /inference="protein motif:CDD:ABC_NatA_like, Similar in FT sequence to NatA, this is the ATPase component of a FT bacterial ABC-type Na+ transport system called NatAB, which FT catalyzes ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled to proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NatA_sodium_exporter, FT NatA is the ATPase component of a bacterial ABC-type Na+ FT transport system called NatAB, which catalyzes FT ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NikE_OppD_transporters, FT The ABC transporter subfamily specific for the transport of FT dipeptides, oligopeptides (OppD), and nickel (NikDE)" FT /inference="protein motif:CDD:ABC_NrtD_SsuB_transporters, FT NrtD and SsuB are the ATP-binding subunits of the bacterial FT ABC-type nitrate and sulfonate transport systems, FT respectively" FT /inference="protein motif:CDD:ABC_OpuCA_Osmoprotection, FT OpuCA is a the ATP binding component of a bacterial solute FT transporter that serves a protective role to cells growing FT in a hyperosmolar environment" FT /inference="protein motif:CDD:ABC_Org_Solvent_Resistant, FT ABC (ATP-binding cassette) transport system involved in FT resistant to organic solvents" FT /inference="protein motif:CDD:ABC_PDR_domain1, The FT pleiotropic drug resistance (PDR) family of ATP-binding FT cassette (ABC) transporters" FT /inference="protein motif:CDD:ABC_PDR_domain2, The FT pleiotropic drug resistance-like (PDR) family of FT ATP-binding cassette (ABC) transporters" FT /inference="protein motif:CDD:ABC_PhnC_transporter, FT ABC-type phosphate/phosphonate transport system" FT /inference="protein motif:CDD:ABC_PotA_N, PotA is an FT ABC-type transporter and the ATPase component of the FT spermidine/putrescine-preferential uptake system consisting FT of PotA, -B, -C, and -D" FT /inference="protein motif:CDD:ABC_Pro_Gly_Bertaine, This FT family comprises the glycine betaine/L-proline ATP binding FT subunit in bacteria and its equivalents in archaea" FT /inference="protein FT motif:CDD:ABC_PstB_phosphate_transporter, Phosphate uptake FT is of fundamental importance in the cell physiology of FT bacteria because phosphate is required as a nutrient" FT /inference="protein motif:CDD:ABC_putative_ATPase, This FT subfamily is involved in drug resistance, nodulation, lipid FT transport, and bacteriocin and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor_domain1, FT The ATPase domain 1 of RNase L inhibitor" FT /inference="protein motif:CDD:ABC_subfamily_A, The ABCA FT subfamily mediates the transport of a variety of lipid FT compounds" FT /inference="protein FT motif:CDD:ABC_ThiQ_thiamine_transporter, ABC-type thiamine FT tranport system" FT /inference="protein motif:CDD:ABC_TM1139_LivF_branched, FT LivF (TM1139) is part of the LIV-I bacterial ABC-type FT two-component transport system that imports neutral, FT branched-chain amino acids" FT /inference="protein motif:CDD:ABC_tran, ABC transporter" FT /inference="protein motif:CDD:ABC_UvrA, The excision repair FT protein UvrA" FT /inference="protein motif:CDD:ABC_YhbG, The ABC FT transporters belonging to the YhbG family are similar to FT members of the Mj1267_LivG family, which is involved in the FT transport of branched-chain amino acids" FT /inference="protein motif:CDD:AppF, ABC-type oligopeptide FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ArpD, ABC-type FT protease/lipase transport system, ATPase and permease FT components [General function prediction only]" FT /inference="protein motif:CDD:ArtP, ABC-type arginine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ATM1, ABC-type transport FT system involved in Fe-S cluster assembly, permease and FT ATPase components [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:BtuD, ABC-type cobalamin FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:CbiO, ABC-type cobalt FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:CcmA, ABC-type multidrug FT transport system, ATPase component [Defense mechanisms]" FT /inference="protein motif:CDD:CcmA, ABC-type transport FT system involved in cytochrome c biogenesis, ATPase FT component [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:CeuD, ABC-type enterochelin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG1123, ATPase components of FT various ABC-type transport systems, contain duplicated FT ATPase [General function prediction only]" FT /inference="protein motif:CDD:COG1245, Predicted ATPase, FT RNase L inhibitor (RLI) homolog [General function FT prediction only]" FT /inference="protein motif:CDD:COG3638, ABC-type FT phosphate/phosphonate transport system, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:COG3845, ABC-type FT uncharacterized transport systems, ATPase components FT [General function prediction only]" FT /inference="protein motif:CDD:COG4136, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4152, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4172, ABC-type FT uncharacterized transport system, duplicated ATPase FT component [General function prediction only]" FT /inference="protein motif:CDD:COG4178, ABC-type FT uncharacterized transport system, permease and ATPase FT components [General function prediction only]" FT /inference="protein motif:CDD:COG4181, Predicted ABC-type FT transport system involved in lysophospholipase L1 FT biosynthesis, ATPase component [Secondary metabolites FT biosynthesis, transport, and catabolism]" FT /inference="protein motif:CDD:COG4559, ABC-type hemin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG4586, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4619, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4674, Uncharacterized FT ABC-type transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:CydC, ABC-type transport FT system involved in cytochrome bd biosynthesis, fused ATPase FT and permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CydD, ABC-type transport FT system involved in cytochrome bd biosynthesis, ATPase and FT permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CysA, ABC-type FT sulfate/molybdate transport systems, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:DppD, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:DppF, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:FepC, ABC-type FT cobalamin/Fe3+-siderophores transport systems, ATPase FT components [Inorganic ion transport and metabolism / FT Coenzyme metabolism]" FT /inference="protein motif:CDD:FtsE, Predicted ATPase FT involved in cell division [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:GlnQ, ABC-type polar amino FT acid transport system, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:HisP, ABC-type histidine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:LivF, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:LivG, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:MalK, ABC-type sugar FT transport systems, ATPase components [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:CDD:MdlB, ABC-type multidrug FT transport system, ATPase and permease components [Defense FT mechanisms]" FT /inference="protein motif:CDD:MglA, ABC-type sugar FT transport system, ATPase component [Carbohydrate transport FT and metabolism]" FT /inference="protein motif:CDD:ModC, ABC-type molybdate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ModF, ABC-type molybdenum FT transport system, ATPase component/photorepair protein PhrA FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NatA, ABC-type Na+ transport FT system, ATPase component [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:OpuBA, ABC-type FT proline/glycine betaine transport systems, ATPase FT components [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:PhnL, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PotA, ABC-type FT spermidine/putrescine transport systems, ATPase components FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ProV, ABC-type FT proline/glycine betaine transport system, ATPase component FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PstB, ABC-type phosphate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PvdE, ABC-type siderophore FT export system, fused ATPase and permease components FT [Secondary metabolites biosynthesis, transport, and FT catabolism / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:SalX, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapD, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapF, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SufC, ABC-type transport FT system involved in Fe-S cluster assembly, ATPase component FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:SunT, ABC-type FT bacteriocin/lantibiotic exporters, contain an N-terminal FT double-glycine peptidase domain [Defense mechanisms]" FT /inference="protein motif:CDD:TagH, ABC-type FT polysaccharide/polyol phosphate transport system, ATPase FT component [Carbohydrate transport and metabolism / Cell FT envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:TauB, ABC-type FT nitrate/sulfonate/bicarbonate transport system, ATPase FT component [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:TauB, ABC-type taurine FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ThiQ, ABC-type thiamine FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:Ttg2A, ABC-type transport FT system involved in resistance to organic solvents, ATPase FT component [Secondary metabolites biosynthesis, transport, FT and catabolism]" FT /inference="protein motif:CDD:Uup, ATPase components of ABC FT transporters with duplicated ATPase domains [General FT function prediction only]" FT /inference="protein motif:CDD:YhbG, ABC-type (unclassified) FT transport system, ATPase component [General function FT prediction only]" FT /inference="protein motif:CDD:ZnuC, ABC-type Mn/Zn FT transport systems, ATPase component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG0444 ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component; E Amino acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR19222 ATP-BINDING FT CASSETTE TRANSPORTER" FT /inference="protein motif:HMMPfam:PF00005 ABC_tran FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:HMMPfam:PF08352 oligo_HPY FT InterPro:IPR013563 Oligopeptide/dipeptide ABC transporter, FT C-terminal" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:HMMTigr:TIGR01727 FT oligo_HPY:oligopeptide/dipeptide ABC trans FT InterPro:IPR010066 Oligopeptide/dipeptide ABC transporter, FT ATP-binding protein, C-terminal GO:Molecular Function:ATP FT binding (GO:0005524), Molecular Function:peptide FT transporter activity (GO:0015197), Biological FT Process:peptide transport (GO:0015833)" FT /inference="protein motif:ProfileScan:PS50100 DA_BOX FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ProfileScan:PS50893 FT ABC_TRANSPORTER_2 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ScanRegExp:PS00211 FT ABC_TRANSPORTER_1 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32836.1" FT /translation="MAKNILEVRNLKMYYFTNRGMVRAVDDISFDLKKGEVLGLAGESG FT CGKSSLGFTLMGMPTPPGKIVDGSIKIDGREIVGLPEDVLRKEIRWQKISMIFQGAMNA FT LNPVYTVGYQMIEPLVLHKGMSKDEALDRAQKYLELVGLDPEIVYRYPHELSGGMKQRV FT IIASALLLEPDVVIADEPTTALDVVVQAQIINLMKKLKKDLGLSMIFITHDLSILAEIS FT DKVAIMYAGKIIEIGDSEKIYYEPAHPYTQKLLASIPRLHEDVEKLEFIPGQPPNLINP FT PKGCRFHPRCPYAMDVCKEQEPELKEIDKDHYAACWLL" FT gene 319617..320624 FT /gene="dppF" FT /gene_synonym="oppF-1" FT /locus_tag="TGAM_0335" FT /note="tg0335" FT CDS 319617..320624 FT /codon_start=1 FT /transl_table=11 FT /gene="dppF" FT /gene_synonym="oppF-1" FT /locus_tag="TGAM_0335" FT /product="ABC-type dipeptide/oligopeptide transport system, FT ATPase component (dppF/oppF)" FT /db_xref="GOA:C5A3M5" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010066" FT /db_xref="InterPro:IPR013563" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:C5A3M5" FT /inference="protein motif:BlastProDom:PD000006 FT Q9UXW1_PYRAB_Q9UXW1; InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:CDD:AbcC, ABC-type metal ion FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ABCC_ATM1_transporter, ATM1 FT is an ABC transporter that is expressed in the FT mitochondria" FT /inference="protein motif:CDD:ABCC_bacteriocin_exporters, FT ABC-type bacteriocin exporters" FT /inference="protein motif:CDD:ABCC_cytochrome_bd, The CYD FT subfamily implicated in cytochrome bd biogenesis" FT /inference="protein motif:CDD:ABCC_Glucan_exporter_like, FT Glucan exporter ATP-binding protein" FT /inference="protein motif:CDD:ABCC_Hemolysin, The FT ABC-transporter hemolysin B is a central component of the FT secretion machinery that translocates the toxin, hemolysin FT A, in a Sec-independent fashion across both membranes of E" FT /inference="protein motif:CDD:ABCC_MRP_domain2, Domain 2 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_Like, The MRP FT (Mutidrug Resistance Protein)-like transporters are FT involved in drug, peptide, and lipid export" FT /inference="protein motif:CDD:ABCC_MsbA, MsbA is an FT essential ABC transporter, closely related to eukaryotic FT MDR proteins" FT /inference="protein motif:CDD:ABCC_NFT1, Domain 2 of NFT1 FT (New full-length MRP-type transporter 1)" FT /inference="protein motif:CDD:ABCC_Protease_Secretion, This FT family represents the ABC component of the protease FT secretion system PrtD, a 60-kDa integral membrane protein FT sharing 37% identity with HlyB, the ABC component of the FT alpha-hemolysin secretion pathway, in the C-terminal FT domain" FT /inference="protein motif:CDD:ABCC_SUR1_N, The SUR domain FT 1" FT /inference="protein motif:CDD:ABCC_TAP, TAP, the FT Transporter Associated with Antigen Processing" FT /inference="protein motif:CDD:ABCD_peroxisomal_ALDP, FT Peroxisomal ATP-binding cassette transporter (Pat) is FT involved in the import of very long-chain fatty acids FT (VLCFA) into the peroxisome" FT /inference="protein motif:CDD:ABCF_EF-3, ABCF_EF-3 FT Elongation factor 3 (EF-3) is a cytosolic protein required FT by fungal ribosomes for in vitro protein synthesis and for FT in vivo growth" FT /inference="protein motif:CDD:ABCG_EPDR, ABCG transporters FT are involved in eye pigment (EP) precursor transport, FT regulation of lipid-trafficking mechanisms, and pleiotropic FT drug resistance (DR)" FT /inference="protein motif:CDD:ABCG_White, The White FT subfamily represents ABC transporters homologous to the FT Drosophila white gene, which acts as a dimeric importer for FT eye pigment precursors" FT /inference="protein motif:CDD:ABC_ATPase, ABC (ATP-binding FT cassette) transporter nucleotide-binding domain" FT /inference="protein motif:CDD:ABC_BcrA_bacitracin_resist, FT The BcrA subfamily represents ABC transporters involved in FT peptide antibiotic resistance" FT /inference="protein motif:CDD:ABC_Carb_Monos_I, This family FT represents the domain I of the carbohydrate uptake proteins FT that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Monos_II, This FT family represents domain II of the carbohydrate uptake FT proteins that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Solutes_like, ABC FT Carbohydrate and Solute Transporters-like subgroup" FT /inference="protein motif:CDD:ABC_CcmA_heme_exporter, CcmA, FT the ATP-binding component of the bacterial CcmAB FT transporter" FT /inference="protein motif:CDD:ABC_Class3, This class is FT comprised of all BPD (Binding Protein Dependent) systems FT that are largely represented in archaea and eubacteria and FT are primarily involved in scavenging solutes from the FT environment" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain1, FT Domain I of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain2, FT Domain II of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_CysA_sulfate_importer, FT Part of the ABC transporter complex cysAWTP involved in FT sulfate import" FT /inference="protein motif:CDD:ABC_DrrA, DrrA is the FT ATP-binding protein component of a bacterial exporter FT complex that confers resistance to the antibiotics FT daunorubicin and doxorubicin" FT /inference="protein motif:CDD:ABC_drug_resistance_like, FT ABC-type multidrug transport system, ATPase component" FT /inference="protein motif:CDD:ABC_DR_subfamily_A, This FT family of ATP-binding proteins belongs to a multisubunit FT transporter involved in drug resistance (BcrA and DrrA), FT nodulation, lipid transport, and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_FeS_Assembly, ABC-type FT transport system involved in Fe-S cluster assembly, ATPase FT component" FT /inference="protein motif:CDD:ABC_FtsE_transporter, FtsE is FT a hydrophilic nucleotide-binding protein that binds FtsX to FT form a heterodimeric ATP-binding cassette (ABC)-type FT transporter that associates with the bacterial inner FT membrane" FT /inference="protein motif:CDD:ABC_HisP_GlnQ_permeases, HisP FT and GlnQ are the ATP-binding components of the bacterial FT periplasmic histidine and glutamine permeases, repectively" FT /inference="protein FT motif:CDD:ABC_Iron-Siderophores_B12_Hemin, ABC FT transporters, involved in the uptake of siderophores, heme, FT and vitamin B12, are widely conserved in bacteria and FT archaea" FT /inference="protein motif:CDD:ABC_KpsT_Wzt, ABC_KpsT_Wzt FT The KpsT/Wzt ABC transporter subfamily is involved in FT extracellular polysaccharide export" FT /inference="protein motif:CDD:ABC_MalK_N, The N-terminal FT ATPase domain of the maltose transporter, MalK" FT /inference="protein motif:CDD:ABC_Metallic_Cations, ABC FT component of the metal-type transporters" FT /inference="protein FT motif:CDD:ABC_MetN_methionine_transporter, MetN (also known FT as YusC) is an ABC-type transporter encoded by metN of the FT metNPQ operon in Bacillus subtilis that is involved in FT methionine transport" FT /inference="protein motif:CDD:ABC_MJ0796_Lo1CDE_FtsE, This FT family is comprised of MJ0796 ATP-binding cassette, FT macrolide-specific ABC-type efflux carrier (MacAB), and FT proteins involved in cell division (FtsE), and release of FT liporoteins from the cytoplasmic membrane (LolCDE)" FT /inference="protein motif:CDD:ABC_Mj1267_LivG_branched, The FT Mj1267/LivG ABC transporter subfamily is involved in the FT transport of the hydrophobic amino acids leucine, FT isoleucine and valine" FT /inference="protein motif:CDD:ABC_ModC_like, Archeal FT protein closely related to ModC" FT /inference="protein FT motif:CDD:ABC_ModC_molybdenum_transporter, ModC is an FT ABC-type transporter and the ATPase component of a FT molybdate transport system that also includes the FT periplasmic binding protein ModA and the membrane protein FT ModB" FT /inference="protein motif:CDD:ABC_MTABC3_MDL1_MDL2, MTABC3 FT (also known as ABCB6) is a mitochondrial ATP-binding FT cassette protein involved in iron homeostasis and one of FT four ABC transporters expressed in the mitochondrial inner FT membrane, the other three being MDL1(ABC7), MDL2, and ATM1" FT /inference="protein motif:CDD:ABC_NatA_like, Similar in FT sequence to NatA, this is the ATPase component of a FT bacterial ABC-type Na+ transport system called NatAB, which FT catalyzes ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled to proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NatA_sodium_exporter, FT NatA is the ATPase component of a bacterial ABC-type Na+ FT transport system called NatAB, which catalyzes FT ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NikE_OppD_transporters, FT The ABC transporter subfamily specific for the transport of FT dipeptides, oligopeptides (OppD), and nickel (NikDE)" FT /inference="protein motif:CDD:ABC_NrtD_SsuB_transporters, FT NrtD and SsuB are the ATP-binding subunits of the bacterial FT ABC-type nitrate and sulfonate transport systems, FT respectively" FT /inference="protein motif:CDD:ABC_OpuCA_Osmoprotection, FT OpuCA is a the ATP binding component of a bacterial solute FT transporter that serves a protective role to cells growing FT in a hyperosmolar environment" FT /inference="protein motif:CDD:ABC_Org_Solvent_Resistant, FT ABC (ATP-binding cassette) transport system involved in FT resistant to organic solvents" FT /inference="protein motif:CDD:ABC_PhnC_transporter, FT ABC-type phosphate/phosphonate transport system" FT /inference="protein motif:CDD:ABC_PotA_N, PotA is an FT ABC-type transporter and the ATPase component of the FT spermidine/putrescine-preferential uptake system consisting FT of PotA, -B, -C, and -D" FT /inference="protein motif:CDD:ABC_Pro_Gly_Bertaine, This FT family comprises the glycine betaine/L-proline ATP binding FT subunit in bacteria and its equivalents in archaea" FT /inference="protein FT motif:CDD:ABC_PstB_phosphate_transporter, Phosphate uptake FT is of fundamental importance in the cell physiology of FT bacteria because phosphate is required as a nutrient" FT /inference="protein motif:CDD:ABC_putative_ATPase, This FT subfamily is involved in drug resistance, nodulation, lipid FT transport, and bacteriocin and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor_domain1, FT The ATPase domain 1 of RNase L inhibitor" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor_domain2, FT The ATPase domain 2 of RNase L inhibitor" FT /inference="protein motif:CDD:ABC_subfamily_A, The ABCA FT subfamily mediates the transport of a variety of lipid FT compounds" FT /inference="protein FT motif:CDD:ABC_ThiQ_thiamine_transporter, ABC-type thiamine FT tranport system" FT /inference="protein motif:CDD:ABC_TM1139_LivF_branched, FT LivF (TM1139) is part of the LIV-I bacterial ABC-type FT two-component transport system that imports neutral, FT branched-chain amino acids" FT /inference="protein motif:CDD:ABC_tran, ABC transporter" FT /inference="protein motif:CDD:ABC_UvrA, The excision repair FT protein UvrA" FT /inference="protein motif:CDD:ABC_YhbG, The ABC FT transporters belonging to the YhbG family are similar to FT members of the Mj1267_LivG family, which is involved in the FT transport of branched-chain amino acids" FT /inference="protein motif:CDD:AppF, ABC-type oligopeptide FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ArpD, ABC-type FT protease/lipase transport system, ATPase and permease FT components [General function prediction only]" FT /inference="protein motif:CDD:ArtP, ABC-type arginine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ATM1, ABC-type transport FT system involved in Fe-S cluster assembly, permease and FT ATPase components [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:BtuD, ABC-type cobalamin FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:CbiO, ABC-type cobalt FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:CcmA, ABC-type multidrug FT transport system, ATPase component [Defense mechanisms]" FT /inference="protein motif:CDD:CcmA, ABC-type transport FT system involved in cytochrome c biogenesis, ATPase FT component [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:CeuD, ABC-type enterochelin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG1123, ATPase components of FT various ABC-type transport systems, contain duplicated FT ATPase [General function prediction only]" FT /inference="protein motif:CDD:COG1245, Predicted ATPase, FT RNase L inhibitor (RLI) homolog [General function FT prediction only]" FT /inference="protein motif:CDD:COG3638, ABC-type FT phosphate/phosphonate transport system, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:COG3845, ABC-type FT uncharacterized transport systems, ATPase components FT [General function prediction only]" FT /inference="protein motif:CDD:COG4136, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4152, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4172, ABC-type FT uncharacterized transport system, duplicated ATPase FT component [General function prediction only]" FT /inference="protein motif:CDD:COG4178, ABC-type FT uncharacterized transport system, permease and ATPase FT components [General function prediction only]" FT /inference="protein motif:CDD:COG4181, Predicted ABC-type FT transport system involved in lysophospholipase L1 FT biosynthesis, ATPase component [Secondary metabolites FT biosynthesis, transport, and catabolism]" FT /inference="protein motif:CDD:COG4559, ABC-type hemin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG4586, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4619, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4674, Uncharacterized FT ABC-type transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:CydC, ABC-type transport FT system involved in cytochrome bd biosynthesis, fused ATPase FT and permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CydD, ABC-type transport FT system involved in cytochrome bd biosynthesis, ATPase and FT permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CysA, ABC-type FT sulfate/molybdate transport systems, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:DppD, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:DppF, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:FepC, ABC-type FT cobalamin/Fe3+-siderophores transport systems, ATPase FT components [Inorganic ion transport and metabolism / FT Coenzyme metabolism]" FT /inference="protein motif:CDD:FtsE, Predicted ATPase FT involved in cell division [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:GlnQ, ABC-type polar amino FT acid transport system, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:HisP, ABC-type histidine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:LivF, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:LivG, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:MalK, ABC-type sugar FT transport systems, ATPase components [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:CDD:MdlB, ABC-type multidrug FT transport system, ATPase and permease components [Defense FT mechanisms]" FT /inference="protein motif:CDD:MglA, ABC-type sugar FT transport system, ATPase component [Carbohydrate transport FT and metabolism]" FT /inference="protein motif:CDD:ModC, ABC-type molybdate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ModF, ABC-type molybdenum FT transport system, ATPase component/photorepair protein PhrA FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NatA, ABC-type Na+ transport FT system, ATPase component [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:OpuBA, ABC-type FT proline/glycine betaine transport systems, ATPase FT components [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:PhnL, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PotA, ABC-type FT spermidine/putrescine transport systems, ATPase components FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ProV, ABC-type FT proline/glycine betaine transport system, ATPase component FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PstB, ABC-type phosphate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PvdE, ABC-type siderophore FT export system, fused ATPase and permease components FT [Secondary metabolites biosynthesis, transport, and FT catabolism / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:SalX, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapD, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapF, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SufC, ABC-type transport FT system involved in Fe-S cluster assembly, ATPase component FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:SunT, ABC-type FT bacteriocin/lantibiotic exporters, contain an N-terminal FT double-glycine peptidase domain [Defense mechanisms]" FT /inference="protein motif:CDD:TagH, ABC-type FT polysaccharide/polyol phosphate transport system, ATPase FT component [Carbohydrate transport and metabolism / Cell FT envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:TauB, ABC-type FT nitrate/sulfonate/bicarbonate transport system, ATPase FT component [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:TauB, ABC-type taurine FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ThiQ, ABC-type thiamine FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:Ttg2A, ABC-type transport FT system involved in resistance to organic solvents, ATPase FT component [Secondary metabolites biosynthesis, transport, FT and catabolism]" FT /inference="protein motif:CDD:Uup, ATPase components of ABC FT transporters with duplicated ATPase domains [General FT function prediction only]" FT /inference="protein motif:CDD:YhbG, ABC-type (unclassified) FT transport system, ATPase component [General function FT prediction only]" FT /inference="protein motif:CDD:ZnuC, ABC-type Mn/Zn FT transport systems, ATPase component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG4608 ABC-type oligopeptide FT transport system, ATPase component; E Amino acid transport FT and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR19222 ATP-BINDING FT CASSETTE TRANSPORTER" FT /inference="protein motif:HMMPfam:PF00005 ABC_tran FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:HMMPfam:PF08352 oligo_HPY FT InterPro:IPR013563 Oligopeptide/dipeptide ABC transporter, FT C-terminal" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:HMMTigr:TIGR01727 FT oligo_HPY:oligopeptide/dipeptide ABC trans FT InterPro:IPR010066 Oligopeptide/dipeptide ABC transporter, FT ATP-binding protein, C-terminal GO:Molecular Function:ATP FT binding (GO:0005524), Molecular Function:peptide FT transporter activity (GO:0015197), Biological FT Process:peptide transport (GO:0015833)" FT /inference="protein motif:ProfileScan:PS50100 DA_BOX FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ProfileScan:PS50101 ATP_GTP_A2" FT /inference="protein motif:ProfileScan:PS50893 FT ABC_TRANSPORTER_2 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ScanRegExp:PS00211 FT ABC_TRANSPORTER_1 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32837.1" FT /translation="MAEPVLKVENLKKYFPIKRSFIDTLKGAPQRYVKAVDGISFEIGK FT QQVFALVGESGCGKSTTGKLIVKLLEPTDGRIYLEGQDVTDIVTKEEVLAYRRKVQIIF FT QDPFSSMNPRFRIFDILEEPLLIHGIGETRAEREELIYKALEMVKITPPEDYVGRFPHM FT LSGGQRQRVAIARALILNPTFIVADEPVSMLDVSIRAEILELMKELKEKMGVTYLYITH FT DMSTARYFADWMAVMYLGRIVEMGPAKRVIDNPLHPYTRALLAAVPEPKPERRKVIKEL FT PIKGEVPSAANVPPGCRFHPRCIYAQKGLCDVEQPKLIEYEHNHWAECHLVGKF" FT gene 320600..321115 FT /locus_tag="TGAM_0336" FT /note="tg0336" FT CDS 320600..321115 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0336" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3M6" FT /protein_id="ACS32838.1" FT /translation="MPSCGQVLTLLHFLSVVKMVLEPLRLAFRYPHIKVGFTFLFLALI FT IALAGTYGVDKSYHESGTLKPGLNVLGNSNFERDYYYYNRTLVLKSKYGEVKVNNITYQ FT VYDTLNLTLNSRPHVELISGNVSYDYTSRAVDYPFAPASLIAFVFFLTGLVLSVLGYMR FT MMSDLRSG" FT gene 321125..321985 FT /locus_tag="TGAM_0337" FT /note="tg0337" FT CDS 321125..321985 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0337" FT /product="Drug/Metabolite transporter, putative" FT /note="Belongs to DUF6 family; 10 probable transmembrane FT helices predicted by modhmm" FT /db_xref="GOA:C5A3M7" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:C5A3M7" FT /inference="protein motif:COG:COG0697 Permeases of the FT drug/metabolite transporter (DMT) superfamily; G FT Carbohydrate transport and metabolism" FT /inference="protein motif:HMMPfam:PF00892 DUF6 FT InterPro:IPR000620 Protein of unknown function DUF6, FT transmembrane GO:Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32839.1" FT /translation="MKRGYILVFLAASTWGTIGIFATYIYRYKVDPFTMVFWRVLFALV FT ILGTYVSLFLRENPFIREKLWFYAVYGLVGVFAFYTLYFYTVKISSVGFAVLLIYTAPA FT FSVILGRLIFREPITAEKITALVMVLVGVILVAGNVDFKVSNVALLTGIATGFTYALYG FT VLAKFGVRNERPERVLFMTLLFGLLFLAPFSKFSVPTGAIPYLLGLAFFPTFLGYTLYN FT HALKEVEVSRASIVATVEPVVAIVLAYLLFGEKLTPLQLLGGTLIIGASVLVHLREGRN FT GRAQM" FT gene complement(321976..323316) FT /gene="glnA" FT /locus_tag="TGAM_0338" FT /note="tg0338" FT CDS complement(321976..323316) FT /codon_start=1 FT /transl_table=11 FT /gene="glnA" FT /locus_tag="TGAM_0338" FT /product="Glutamine synthetase (glnA)" FT /EC_number="6.3.1.2" FT /db_xref="GOA:C5A3M8" FT /db_xref="InterPro:IPR004809" FT /db_xref="InterPro:IPR008146" FT /db_xref="InterPro:IPR008147" FT /db_xref="InterPro:IPR014746" FT /db_xref="UniProtKB/TrEMBL:C5A3M8" FT /inference="protein motif:BlastProDom:PD001057 FT GLNA_PYRFU_Q05907; InterPro:IPR008146 Glutamine synthetase, FT catalytic region GO:Molecular Function:glutamate-ammonia FT ligase activity (GO:0004356), Biological Process:nitrogen FT compound metabolism (GO:0006807)" FT /inference="protein motif:CDD:Gln-synt_C, Glutamine FT synthetase, catalytic domain" FT /inference="protein motif:CDD:Gln-synt_N, Glutamine FT synthetase, beta-Grasp domain" FT /inference="protein motif:COG:COG0174 Glutamine synthetase; FT E Amino acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.10.20.70 no FT description" FT /inference="protein motif:Gene3D:G3D.3.90.269.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR13682 GLUTAMINE FT SYNTHETASE/DNA REPAIR PROTEIN-RELATED" FT /inference="protein motif:HMMPanther:PTHR13682:SF27 FT GLUTAMINE SYNTHETASE" FT /inference="protein motif:HMMPfam:PF00120 Gln-synt_C FT InterPro:IPR008146 Glutamine synthetase, catalytic region FT GO:Molecular Function:glutamate-ammonia ligase activity FT (GO:0004356), Biological Process:nitrogen compound FT metabolism (GO:0006807)" FT /inference="protein motif:HMMPfam:PF03951 Gln-synt_N FT InterPro:IPR008147 Glutamine synthetase, beta-Grasp FT GO:Molecular Function:glutamate-ammonia ligase activity FT (GO:0004356), Biological Process:glutamine biosynthesis FT (GO:0006542), Biological Process:nitrogen compound FT metabolism (GO:0006807)" FT /inference="protein motif:HMMTigr:TIGR00653 GlnA:glutamine FT synthetase, type I InterPro:IPR004809 Glutamine synthetase FT type I GO:Molecular Function:glutamate-ammonia ligase FT activity (GO:0004356), Cellular Component:cytoplasm FT (GO:0005737), Biological Process:nitrogen fixation FT (GO:0009399)" FT /inference="protein motif:ScanRegExp:PS00180 GLNA_1 FT InterPro:IPR008147 Glutamine synthetase, beta-Grasp FT GO:Molecular Function:glutamate-ammonia ligase activity FT (GO:0004356), Biological Process:glutamine biosynthesis FT (GO:0006542), Biological Process:nitrogen compound FT metabolism (GO:0006807)" FT /inference="protein motif:ScanRegExp:PS00181 GLNA_ATP FT InterPro:IPR008146 Glutamine synthetase, catalytic region FT GO:Molecular Function:glutamate-ammonia ligase activity FT (GO:0004356), Biological Process:nitrogen compound FT metabolism (GO:0006807)" FT /inference="protein motif:superfamily:SSF54368 Glutamine FT synthetase, N-terminal domain InterPro:IPR008147 Glutamine FT synthetase, beta-Grasp GO:Molecular FT Function:glutamate-ammonia ligase activity (GO:0004356), FT Biological Process:glutamine biosynthesis (GO:0006542), FT Biological Process:nitrogen compound metabolism FT (GO:0006807)" FT /inference="protein motif:superfamily:SSF55931 Glutamine FT synthase/guanido kinase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32840.1" FT /translation="MNEIKGLRGTTGALPMERPRPHFIQLVFVDINGIPKGMEIPITRY FT EEAIEEGIAFDGSSIAGFQGIEDSDLLFKADPSTYAEVPWEGIARVYGYIYKDGKPYGA FT DPRGVLKRALEMLEKEGFNAYIGPEPEFYILKKNGTWELHIPDIGGYFDLVALDKAREL FT RREIALYMPAFGLIPEVLHHEVGKAQHEIDFRYDEALKTADNIVSFKYIVKAVAEMRGL FT HATFMPKPLYGYPGNGMHLHISLWKDGENVFIGEDGLSETALHFMAGILKHAKALTALT FT NPTVNSYKRLVPGYEAPVYISWGYKNRSTLIRVPAFSGNGARIEYRCPDPSANPYLAIA FT AVLIAGLDGIKRKLEPEAYVETNVYEMSEEERNKAGIETLPGSLGEALEELRRDKIIKE FT ALAGAYENFIAYKEREWSEYVAYIESRELPLETKKVTEWELERYFYI" FT gene 323536..323940 FT /locus_tag="TGAM_0339" FT /note="tg0339" FT CDS 323536..323940 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0339" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR002746" FT /db_xref="UniProtKB/TrEMBL:C5A3M9" FT /inference="protein motif:BlastProDom:PD016056 FT Y358_PYRHO_O58096; InterPro:IPR002746 Protein of unknown FT function DUF61" FT /inference="protein motif:CDD:COG2083, Uncharacterized FT protein conserved in archaea [Function unknown]" FT /inference="protein motif:CDD:DUF61, Protein of unknown FT function DUF61" FT /inference="protein motif:COG:COG2083 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF01886 DUF61 FT InterPro:IPR002746 Protein of unknown function DUF61" FT /inference="protein motif:HMMPIR:PIRSF005264 FT Uncharacterised conserved protein InterPro:IPR002746 FT Protein of unknown function DUF61" FT /protein_id="ACS32841.1" FT /translation="MPTAEEILQKEIFRVNLHLPRRRVALGELLNMKDPRVTLRDGSDH FT HFKRDELLYLASLLGDESRLLKLPIILEISTLNRGYFRVRGRLEVRVIDEILGEYDPLN FT EKTEALYPRYLLPRIRRRLPTTTTYAFISE" FT gene 323937..324230 FT /locus_tag="TGAM_0340" FT /note="tg0340" FT CDS 323937..324230 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0340" FT /product="Conserved hypothetical protein" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3N0" FT /protein_id="ACS32842.1" FT /translation="MMEMDENTRILRDYYFFTIPHITVFAGAVLGILFILRIDVRMALG FT IFAFLYGLMLLTIHAIVFRHFRSNMIYRLGLLFSLVLVMTGLFLMYASISNL" FT gene 324294..325985 FT /locus_tag="TGAM_0341" FT /note="tg0341" FT CDS 324294..325985 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0341" FT /product="Conserved hypothetical protein" FT /note="Contains 1 ATP synthase A subunit signature FT (PS00449); 2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3N1" FT /inference="protein motif:ScanRegExp:PS00449 ATPASE_A FT InterPro:IPR000568 ATPase, F0 complex, subunit A" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32843.1" FT /translation="MVMAMRSLGFLTLIVLFTALFSLPPVSSSDNPSLTTRDVITVLSG FT EFLSDSIEVINEAPFNFTAVVYIEYTVSGRPKDLINFTPIYTVFKNWKSGESQELPFNI FT SVSSNVAPGFYSLILHFRGMAEDGSLHDLILKVPLRVSDNPIVLKSARLYILQRPNAPS FT PDPFNGETLVLRATVENIGNTPTGFVHWTNVTFLPTGELVYTATGHSVISPGTVKIERR FT IPVEWNWRSGDYNVTFTVSSIRGKEYFWRVIHVSTGIDYINVSLSRDSVLLGDDLKAYV FT TVLSERELEANLNVTVWGDDSLVLSKVIPLSLHPGAQVVGVDLPTKKTGELMFMMELYH FT DNVSLANTTGTYRVLGYPFIAGLGRELNGSTLRLKVNITNPNDISMKVRLLYNLTSNGV FT LLYSDSKSLLLRPGTTVESFDFQLAWNSTVEYSFMLLGDGKTFDTKTGIVKVPPRPVST FT ESTSSMNTSSQTGGGGKGSSVTYVIVVLAVIVVVILAAGIFLGSREEEGYVSPWERARK FT PRVRPRPKRKSPLGRFKRPKLPRFIENRELPRRLRRKPVSKVRKKK" FT gene complement(326024..326346) FT /gene="rnpB" FT /locus_tag="TGAM_r007" FT /note="tg_RNAseP" FT ncRNA complement(326024..326346) FT /gene="rnpB" FT /locus_tag="TGAM_r007" FT /product="RNAse P RNA" FT /ncRNA_class="RNase_P_RNA" FT gene complement(326331..327191) FT /locus_tag="TGAM_0342" FT /note="tg0342" FT CDS complement(326331..327191) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0342" FT /product="Membrane transport protein" FT /note="10 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3N2" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:C5A3N2" FT /inference="protein motif:COG:COG0697 Permeases of the FT drug/metabolite transporter (DMT) superfamily; G FT Carbohydrate transport and metabolism" FT /inference="protein motif:HMMPfam:PF00892 DUF6 FT InterPro:IPR000620 Protein of unknown function DUF6, FT transmembrane GO:Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32844.1" FT /translation="MGELTMNRGKAQIALAMLIWGSVGIFGRLSGLSGLGVAFSRVSLG FT AVVLLPILGLRGKLGNALGELRKRPYHMLALGTALALNWVFLFTAFNHTTIANAVLVYY FT TAPVLATLISWRFLHERLDARKVLSLAIAFTGLLLIASSQRISLSDRDFIGIVFAFLGA FT LFYALIPNLGRFLRGVDGESLTFLQLAIASAVLIPFVVLENVGSPVWWTIAVLVLVHTV FT LALYLYMDGLKKVEVKDAALLSYLDPLSAIVYAFLVFGEVPGVRTVIGGALILLASALD FT LARGS" FT gene complement(327173..328198) FT /gene="priA" FT /locus_tag="TGAM_0343" FT /note="tg0343" FT CDS complement(327173..328198) FT /codon_start=1 FT /transl_table=11 FT /gene="priA" FT /locus_tag="TGAM_0343" FT /product="DNA primase small subunit (priA)" FT /db_xref="GOA:C5A3N3" FT /db_xref="InterPro:IPR002755" FT /db_xref="InterPro:IPR014052" FT /db_xref="InterPro:IPR023639" FT /db_xref="UniProtKB/TrEMBL:C5A3N3" FT /inference="protein motif:CDD:DNA_primase_S, DNA primase FT small subunit" FT /inference="protein motif:CDD:PRI1, Eukaryotic-type DNA FT primase, catalytic (small) subunit [DNA replication, FT recombination, and repair]" FT /inference="protein motif:COG:COG1467 Eukaryotic-type DNA FT primase, catalytic (small) subunit; L Replication, FT recombination and repair" FT /inference="protein motif:Gene3D:G3D.3.90.920.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10536 DNA PRIMASE FT InterPro:IPR002755 DNA primase, small subunit GO:Molecular FT Function:DNA primase activity (GO:0003896), Biological FT Process:DNA replication, synthesis of RNA primer FT (GO:0006269)" FT /inference="protein motif:HMMPanther:PTHR10536:SF1 DNA FT PRIMASE" FT /inference="protein motif:HMMPfam:PF01896 DNA_primase_S FT InterPro:IPR002755 DNA primase, small subunit GO:Molecular FT Function:DNA primase activity (GO:0003896), Biological FT Process:DNA replication, synthesis of RNA primer FT (GO:0006269)" FT /inference="protein motif:HMMPIR:PIRSF005538 DNA primase, FT small subunit InterPro:IPR002755 DNA primase, small subunit FT GO:Molecular Function:DNA primase activity (GO:0003896), FT Biological Process:DNA replication, synthesis of RNA primer FT (GO:0006269)" FT /inference="protein motif:HMMTigr:TIGR00335 primase_sml:DNA FT primase, eukaryotic-type InterPro:IPR002755 DNA primase, FT small subunit GO:Molecular Function:DNA primase activity FT (GO:0003896), Biological Process:DNA replication, synthesis FT of RNA primer (GO:0006269)" FT /inference="protein motif:superfamily:SSF56747 DNA primase" FT /protein_id="ACS32845.1" FT /translation="MSLFREVTPEERKAYYQREWSAEMLPDFIVETLENREFGFDHTGE FT GPSDRKNEFSDVRDLEDYVKATAPYAMFSSVALYEKPSEMEGWLGAELVFDIDAKDLPL FT RRCMDLHPSGQVCPLCLEDAKELVLDTLTILKEDFGFEEIHVVYSGRGYHIRVLDDWVL FT DLDSKAREKILAYVSAAEEITFEDVQSRRIMLSAGYFRVFRLRFGYFLRRINLNHLLNV FT GIKRRQAEAILEERDEIYEGFVRKAMLTAFPQGIGYKTLMRLFSLSTTFSRAYFDGKVT FT IDLKRILRVPSSLHSKVGMVTTYIGDDERKLEKFNPFRDAVPEFRKEEVKEAYEEWESS FT L" FT gene complement(328195..329367) FT /gene="priB" FT /locus_tag="TGAM_0344" FT /note="tg0344" FT CDS complement(328195..329367) FT /codon_start=1 FT /transl_table=11 FT /gene="priB" FT /locus_tag="TGAM_0344" FT /product="DNA primase large subunit (priB)" FT /db_xref="GOA:C5A3N4" FT /db_xref="InterPro:IPR007238" FT /db_xref="UniProtKB/TrEMBL:C5A3N4" FT /inference="protein motif:CDD:DNA_primase_lrg, FT Eukaryotic-type DNA primase, large subunit" FT /inference="protein motif:CDD:PRI2, Eukaryotic-type DNA FT primase, large subunit [DNA replication, recombination, and FT repair]" FT /inference="protein motif:COG:COG2219 Eukaryotic-type DNA FT primase, large subunit; L Replication, recombination and FT repair" FT /inference="protein motif:HMMPfam:PF04104 DNA_primase_lrg FT InterPro:IPR007238 Eukaryotic-type DNA primase, large FT subunit GO:Molecular Function:DNA primase activity FT (GO:0003896), Cellular Component:alpha DNA FT polymerase:primase complex (GO:0005658), Biological FT Process:DNA replication, synthesis of RNA primer FT (GO:0006269)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32846.1" FT /translation="MLDPFGRRARKIIEDFGGIEAFLERIPGYVDVEEVLERVTWENKP FT PENVLNAEEWKDLMTFYALLGALALSPYGFEMELVRDKNAEIYLTKLRKAETLEDISLR FT VKSVSDGEIPEKDRMILEKSRYRELGEEERKRLRIEYKMWLRHFIPLWEGSLKDVYIRN FT SWAYLRREEVLSLWTKAFEKNLERAVNVLYDVRDDLPEFYSILRERLAEIAREKFKERI FT EAIGSTGSQPLRPDLFPPCIKKALSGVSSGMRNYAITVLLTSFLSYARICPNPPRRNVR FT IKDCIGDLSIIEREILPLIIEAGNRCKPPLFEDQPNEIKNIWYHLGFGFTERPSLEDSG FT NSTWYFPPNCDKIRANAPALCKPDKYCRGIKNPLTYYLRRLYLERKEGGE" FT gene 329468..330058 FT /locus_tag="TGAM_0345" FT /note="tg0345" FT CDS 329468..330058 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0345" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR014424" FT /db_xref="UniProtKB/TrEMBL:C5A3N5" FT /inference="protein motif:CDD:COG2150, Predicted regulator FT of amino acid metabolism, contains ACT domain [General FT function prediction only]" FT /inference="protein motif:COG:COG2150 Predicted regulator FT of amino acid metabolism, contains ACT domain; R General FT function prediction only" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32847.1" FT /translation="MMLILEEYFKNYPARRKVVEFLFENGLSVKNGRIYLRNVEIPISE FT LARVIGVNRKIIYHTVEYIEKTPALRLIFEKLNPLPSLIDVAPLMGWEVLEIELDKERY FT MEGFYRVLKLLHDHNVPVMEVFSRNLREEPSKLYIVIDGTLPVDAFVKIKETEGFRRLI FT IRTPEKDKTKFVCEYCEVEYCPKRALLERLSTR" FT gene complement(330048..330323) FT /gene="acyP" FT /locus_tag="TGAM_0346" FT /note="tg0346" FT CDS complement(330048..330323) FT /codon_start=1 FT /transl_table=11 FT /gene="acyP" FT /locus_tag="TGAM_0346" FT /product="Acylphosphatase (acyP)" FT /EC_number="3.6.1.7" FT /db_xref="GOA:C5A3N6" FT /db_xref="InterPro:IPR001792" FT /db_xref="InterPro:IPR017968" FT /db_xref="InterPro:IPR020456" FT /db_xref="UniProtKB/TrEMBL:C5A3N6" FT /inference="protein motif:BlastProDom:PD001884 FT Q8U414_PYRFU_Q8U414; InterPro:IPR001792 Acylphosphatase FT GO:Molecular Function:acylphosphatase activity FT (GO:0003998)" FT /inference="protein motif:CDD:Acylphosphatase, FT Acylphosphatase" FT /inference="protein motif:CDD:AcyP, Acylphosphatases FT [Energy production and conversion]" FT /inference="protein motif:CDD:HypF, Hydrogenase maturation FT factor [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:COG:COG1254 Acylphosphatases; C FT Energy production and conversion" FT /inference="protein motif:FPrintScan:PR00112 ACYLPHPHTASE FT InterPro:IPR001792 Acylphosphatase GO:Molecular FT Function:acylphosphatase activity (GO:0003998)" FT /inference="protein motif:Gene3D:G3D.3.30.70.100 no FT description" FT /inference="protein motif:HMMPanther:PTHR10029 FT ACYLPHOSPHATASE-RELATED" FT /inference="protein motif:HMMPfam:PF00708 Acylphosphatase FT InterPro:IPR001792 Acylphosphatase GO:Molecular FT Function:acylphosphatase activity (GO:0003998)" FT /inference="protein motif:ScanRegExp:PS00150 FT ACYLPHOSPHATASE_1 InterPro:IPR001792 Acylphosphatase FT GO:Molecular Function:acylphosphatase activity FT (GO:0003998)" FT /inference="protein motif:ScanRegExp:PS00151 FT ACYLPHOSPHATASE_2 InterPro:IPR001792 Acylphosphatase FT GO:Molecular Function:acylphosphatase activity FT (GO:0003998)" FT /inference="protein motif:superfamily:SSF54975 FT Acylphosphatase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32848.1" FT /translation="MRKVRAHLRIYGRVQGVGFRWSMQREARKLGLAGWVRNLPDGSVE FT AVVEGDEERVEALIGWAHQGPPLARVTRVEVKWEEPEGLEGFKVIG" FT gene 330395..330709 FT /gene="cutA" FT /locus_tag="TGAM_0347" FT /note="tg0347" FT CDS 330395..330709 FT /codon_start=1 FT /transl_table=11 FT /gene="cutA" FT /locus_tag="TGAM_0347" FT /product="Divalent cation tolerance protein CutA (cutA)" FT /db_xref="GOA:C5A3N7" FT /db_xref="InterPro:IPR004323" FT /db_xref="InterPro:IPR011322" FT /db_xref="UniProtKB/TrEMBL:C5A3N7" FT /inference="protein motif:CDD:CutA, Uncharacterized protein FT involved in tolerance to divalent cations [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:CDD:CutA1, CutA1 divalent ion FT tolerance protein" FT /inference="protein motif:COG:COG1324 Uncharacterized FT protein involved in tolerance to divalent cations; P FT Inorganic ion transport and metabolism" FT /inference="protein motif:HMMPanther:PTHR11095 DIVALENT FT CATION TOLERANCE CUTA-RELATED InterPro:IPR004323 CutA1 FT divalent ion tolerance protein" FT /inference="protein motif:HMMPanther:PTHR11095:SF1 DIVALENT FT CATION TOLERANCE CUTA-RELATED" FT /inference="protein motif:HMMPfam:PF03091 CutA1 FT InterPro:IPR004323 CutA1 divalent ion tolerance protein" FT /inference="protein motif:superfamily:SSF54913 GlnB-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32849.1" FT /translation="MEAIFVYTTFPDWESAKRITRELLERKLIVCANLREHHSMYFWEG FT KIEEGTEIGAILKTDVSKWKELKNTLRELHPYEIPMIARIDLDKLNREYSEWMEKVLFG FT " FT gene 330706..331293 FT /locus_tag="TGAM_0348" FT /note="tg0348" FT CDS 330706..331293 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0348" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF99 family" FT /db_xref="InterPro:IPR002802" FT /db_xref="UniProtKB/Swiss-Prot:C5A3N8" FT /inference="protein motif:BlastProDom:PD016744 FT Y071_PYRHO_O57792; InterPro:IPR002802 Protein of unknown FT function DUF99" FT /inference="protein motif:CDD:COG1628, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:DUF99, Protein of unknown FT function DUF99" FT /inference="protein motif:COG:COG1628 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01949 DUF99 FT InterPro:IPR002802 Protein of unknown function DUF99" FT /inference="protein motif:HMMPIR:PIRSF006380 FT Uncharacterised conserved protein InterPro:IPR002802 FT Protein of unknown function DUF99" FT /protein_id="ACS32850.1" FT /translation="MIRKVKPEIRVVGFDDGTFSFSSKVAHGRTILVGVVMKGAREVVG FT VLSRWITVDGTDATEKLIDAVVNSRFKDLRVIMLKGVTYGGFNIVDLDKLYLETGLPVL FT VVIRKKPDLRAMEAALRKHFPDWRERFEVLRRAPPLFELIPGKLYLQTVGLSPETAAEI FT VRTTTKTGLIPEPLRLAHMIASAVMTGESTKE" FT gene complement(331382..332227) FT /gene="uspA-1" FT /locus_tag="TGAM_0349" FT /note="tg0349" FT CDS complement(331382..332227) FT /codon_start=1 FT /transl_table=11 FT /gene="uspA-1" FT /locus_tag="TGAM_0349" FT /product="Universal stress protein (UspA)" FT /db_xref="GOA:C5A3N9" FT /db_xref="InterPro:IPR006015" FT /db_xref="InterPro:IPR006016" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:C5A3N9" FT /inference="protein motif:CDD:Usp, Universal stress protein FT family" FT /inference="protein motif:CDD:USP_Like, Usp:Universal FT stress protein family" FT /inference="protein motif:COG:COG0589 Universal stress FT protein UspA and related nucleotide-binding proteins; T FT Signal transduction mechanisms" FT /inference="protein motif:FPrintScan:PR01438 UNVRSLSTRESS FT InterPro:IPR006015 Universal stress protein (Usp)" FT /inference="protein motif:Gene3D:G3D.3.40.50.1420 no FT description" FT /inference="protein motif:HMMPfam:PF00582 Usp FT InterPro:IPR006016 UspA GO:Biological Process:response to FT stress (GO:0006950)" FT /inference="protein motif:superfamily:SSF52402 Adenine FT nucleotide alpha hydrolases-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32851.1" FT /translation="MFERILYPTDFSEVSLKALRECLPEIVRPGVKELHLLHVLDITTL FT DVEAFSLQEVYEEKLEKLKGDIKGMFPETEIVTYVSIGIPSLEIAEYASGKGIDLIVTP FT TTGENIWRRMFLGSTASNLARATKKPVLLLKYEKKEEEILPTFPSCSGIFSRPLVALDF FT SKCSIRIVKTVKKFEELIESGILLHSVDYGGIDELEHNIEIARKNLEKTAKGIKAEFEL FT EVMVGTASQAIIGTALAKKATIIVIGKKGRSFLKDLILGSTAERVMRDSKIPVLLVPCD FT " FT gene 332329..333525 FT /gene="gcvT" FT /locus_tag="TGAM_0350" FT /note="tg0350" FT CDS 332329..333525 FT /codon_start=1 FT /transl_table=11 FT /gene="gcvT" FT /locus_tag="TGAM_0350" FT /product="Glycine cleavage system T protein FT (aminomethyltransferase) (gcvT)" FT /EC_number="2.1.2.10" FT /db_xref="GOA:C5A3P0" FT /db_xref="InterPro:IPR006222" FT /db_xref="InterPro:IPR006223" FT /db_xref="InterPro:IPR013977" FT /db_xref="InterPro:IPR022903" FT /db_xref="UniProtKB/Swiss-Prot:C5A3P0" FT /inference="protein motif:CDD:GcvT, Glycine cleavage system FT T protein (aminomethyltransferase) [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:GCV_T, Glycine cleavage FT T-protein (aminomethyl transferase)" FT /inference="protein motif:COG:COG0404 Glycine cleavage FT system T protein (aminomethyltransferase); E Amino acid FT transport and metabolism" FT /inference="protein motif:HMMPanther:PTHR13847 FT AMINOMETHYLTRANSFERASE RELATED" FT /inference="protein motif:HMMPanther:PTHR13847:SF2 FT AMINOMETHYLTRANSFERASE RELATED" FT /inference="protein motif:HMMPfam:PF01571 GCV_T FT InterPro:IPR006222 Glycine cleavage T protein (aminomethyl FT transferase) GO:Molecular Function:aminomethyltransferase FT activity (GO:0004047), Cellular Component:cytoplasm FT (GO:0005737), Biological Process:glycine catabolism FT (GO:0006546)" FT /inference="protein motif:HMMTigr:TIGR00528 gcvT:glycine FT cleavage system T protein InterPro:IPR006223 Glycine FT cleavage system T protein GO:Molecular FT Function:aminomethyltransferase activity (GO:0004047), FT Biological Process:glycine catabolism (GO:0006546)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32852.1" FT /translation="MVKRVHIFDWHKEHAKKVEEFAGWEMPIWYSSIKEEHLAVRNGVG FT IFDVSHMGEFIFRGKDALEFLQYVTTNDISKPPAISGTYTLVLNERGAVKDETLVFNLG FT NDTYMMVCDSDAFEKLEAWFNAIKRGIEKFGSIDLEIENKTYDMAMFSVQGPKARDLAK FT DLFGIDINDLWWFQAKEVELDGIKMLLSRSGYTGENGWEVYFEDKNPYHPNPEKRGRPE FT KALHVWERILEEGEKYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQ FT ANLDFAIFWDKEFIGKEALLKQKERGLGRKMVHFKMVDRGIPREGYKVLANGEVIGEVT FT SGTLSPLLGIGIGIAFVKEEYAKPGLEIEVEIRGKPKRAVTVSPPFYDPKKYGAFREE" FT gene 333558..334379 FT /locus_tag="TGAM_0351" FT /note="tg0351" FT CDS 333558..334379 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0351" FT /product="Permease, putative" FT /note="Belongs to DUF6 family; 10 probable transmembrane FT helices predicted by modhmm" FT /db_xref="GOA:C5A3P1" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:C5A3P1" FT /inference="protein motif:COG:COG0697 Permeases of the FT drug/metabolite transporter (DMT) superfamily; G FT Carbohydrate transport and metabolism" FT /inference="protein motif:HMMPfam:PF00892 DUF6 FT InterPro:IPR000620 Protein of unknown function DUF6, FT transmembrane GO:Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32853.1" FT /translation="MSRKHEIGAVLLWSTVASAFKLSLRYMSPIQLLFWAFLTSFLLYG FT VLHLRSFRFSRENLRSAYLGFALLLYYTVLFSAYDLLPAQEAQALNYTWPLALVLLSVP FT LLERKLAPDTLLGLFLGFLGALIVATRGRPLSLGFSNPVGDILGLGSALIWAIYWLLNV FT RDERKLEEKMFWNFTFALLYSVPLMLFAGFSLPSPKGLAGAVYVGLFEMGVTYLLWYRA FT VESDVAFASNLVYLVPFLSLLFISIVLGEMIETTTVLGLVLIVVGILLGQR" FT gene complement(334514..334591) FT /locus_tag="TGAM_r008" FT /note="tg_tRNA-Gly1" FT tRNA complement(334514..334591) FT /locus_tag="TGAM_r008" FT /product="tRNA-Gly" FT /note="codon recognized: GGA" FT gene complement(334600..334676) FT /locus_tag="TGAM_r009" FT /note="tg_tRNA-Phe" FT tRNA complement(334600..334676) FT /locus_tag="TGAM_r009" FT /product="tRNA-Phe" FT /note="codon recognized: UUC" FT gene complement(334767..335081) FT /locus_tag="TGAM_0352" FT /note="tg0352" FT CDS complement(334767..335081) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0352" FT /product="Conserved hypothetical protein" FT /note="Good similarity with a small orf in PAB2329 FT downstream region; 2 probable transmembrane helices FT predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3P2" FT /protein_id="ACS32854.1" FT /translation="MNSICSFQTFLWSEVYSQEVKKMNIVKARAILSTLLLVVFLGVLF FT IMMGVLYTSKTGHSFLGMNKNQLFRIRNVLGPLMNALIIVHFGLNWGMYKRELKVLFKK FT " FT gene complement(335078..335797) FT /gene="exsB" FT /locus_tag="TGAM_0353" FT /note="tg0353" FT CDS complement(335078..335797) FT /codon_start=1 FT /transl_table=11 FT /gene="exsB" FT /locus_tag="TGAM_0353" FT /product="Transcription regulator, putative, ExsB family FT (ExsB)" FT /note="Member of PP-loop superfamily clan" FT /db_xref="GOA:C5A3P3" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR018317" FT /db_xref="UniProtKB/TrEMBL:C5A3P3" FT /inference="protein motif:CDD:COG0603, Predicted PP-loop FT superfamily ATPase [General function prediction only]" FT /inference="protein motif:CDD:ExsB, ExsB" FT /inference="protein motif:CDD:ExsB, ExsB is a transcription FT regulator related protein" FT /inference="protein motif:COG:COG0603 Predicted PP-loop FT superfamily ATPase; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.610 no FT description" FT /inference="protein motif:HMMPanther:PTHR12196 FAMILY NOT FT NAMED" FT /inference="protein motif:HMMPanther:PTHR12196:SF13 FT SUBFAMILY NOT NAMED" FT /inference="protein motif:HMMPfam:PF06508 ExsB FT InterPro:IPR004479 ExsB GO:Molecular Function:molecular FT function unknown (GO:0005554)" FT /inference="protein motif:HMMPIR:PIRSF006293 FT Uncharacterised conserved protein, ExsB type" FT /inference="protein motif:HMMTigr:TIGR00364 TIGR00364:exsB FT protein InterPro:IPR004479 ExsB GO:Molecular FT Function:molecular function unknown (GO:0005554)" FT /inference="protein motif:superfamily:SSF52402 Adenine FT nucleotide alpha hydrolases-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32855.1" FT /translation="MKRAVVLFSGGLDSTACLYWAKKHYDEVMMLVINYGSNEERVTNR FT VAEFFSKELNVPLKIVRLDFLEEFSKLRGTTLVGGETPRVSVKELEDENVAQETAKSVW FT VPARNLVLISVAASLLDALGGGDIVVGFNAEEGVTFPDNTPEFVEKMNEALKYGTMAEV FT KVVAPLIDLDKRGIARLLKELNAKYEYSNSCYMPKGFTEDGKPIHCGQCESCVRRHRGL FT IEGIGEDRTVYAVEPRI" FT gene complement(335794..336204) FT /locus_tag="TGAM_0354" FT /note="tg0354" FT CDS complement(335794..336204) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0354" FT /product="Nucleotide binding protein, putative, containing FT PIN domain" FT /db_xref="InterPro:IPR002716" FT /db_xref="InterPro:IPR006596" FT /db_xref="UniProtKB/TrEMBL:C5A3P4" FT /inference="protein motif:CDD:COG1848, Predicted nucleic FT acid-binding protein, contains PIN domain [General function FT prediction only]" FT /inference="protein motif:COG:COG1848 Predicted nucleic FT acid-binding protein, contains PIN domain; R General FT function prediction only" FT /inference="protein motif:HMMPfam:PF01850 PIN FT InterPro:IPR002716 PilT protein, N-terminal" FT /inference="protein motif:HMMSmart:SM00670 no description FT InterPro:IPR006596 Nucleotide binding protein, PINc" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /protein_id="ACS32856.1" FT /translation="MGGVAVIDTNFFVYALFEDYERHEEALDILMNLDKWVVPTITLYE FT LIWQLAKMGVPPNNAEDMVRQIIEEPRAEIIDDRLYLLSAFELYGNLGLKHYNDSVILA FT MAKEVGTLASYDKKLRNRAREVGIKLLPEELE" FT gene complement(336192..336428) FT /locus_tag="TGAM_0355" FT /note="tg0355" FT CDS complement(336192..336428) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0355" FT /product="Transcription regulator, SpoVT/AbrB family" FT /db_xref="InterPro:IPR006339" FT /db_xref="InterPro:IPR007159" FT /db_xref="UniProtKB/TrEMBL:C5A3P5" FT /inference="protein motif:COG:COG2002 Regulators of FT stationary/sporulation gene expression; K Transcription" FT /inference="protein motif:HMMPfam:PF04014 SpoVT_AbrB FT InterPro:IPR007159 SpoVT/AbrB-like" FT /inference="protein motif:HMMTigr:TIGR01439 FT lp_hng_hel_AbrB:transcriptional regu InterPro:IPR006339 FT Transcriptional regulator AbrB" FT /inference="protein motif:superfamily:SSF54742 FT Transcription-state regulator AbrB, the N-terminal DNA FT recognition domain" FT /protein_id="ACS32857.1" FT /translation="MPVTKVTRNYQITIPAEIRKALGIKQGEYLTVELRGDEIVIKRAK FT RKWKTYRLGRKYSLEEMERMIEESIEEALRWEE" FT gene complement(336520..337422) FT /gene="pyrD" FT /locus_tag="TGAM_0356" FT /note="tg0356" FT CDS complement(336520..337422) FT /codon_start=1 FT /transl_table=11 FT /gene="pyrD" FT /locus_tag="TGAM_0356" FT /product="Dihydroorotase dehydrogenase (pyrD)" FT /EC_number="1.3.98.1" FT /db_xref="GOA:C5A3P6" FT /db_xref="InterPro:IPR001295" FT /db_xref="InterPro:IPR005720" FT /db_xref="InterPro:IPR012135" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR024920" FT /db_xref="UniProtKB/TrEMBL:C5A3P6" FT /inference="protein motif:CDD:COG0042, tRNA-dihydrouridine FT synthase [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:CDD:DHOD_DHPD_FMN, Dihydroorotate FT dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase FT (DHPD) FMN-binding domain" FT /inference="protein motif:CDD:DHO_dh, Dihydroorotate FT dehydrogenase" FT /inference="protein motif:CDD:DHPD_FMN, Dihydropyrimidine FT dehydrogenase (DHPD) FMN-binding domain" FT /inference="protein motif:CDD:Dus, Dihydrouridine synthase FT (Dus)" FT /inference="protein motif:CDD:DUS_like_FMN, Dihydrouridine FT synthase-like (DUS-like) FMN-binding domain" FT /inference="protein motif:CDD:oxidored_FMN, FT NAD(P)H-dependent flavin oxidoreductase (oxidored) FT FMN-binding superfamily domain" FT /inference="protein motif:CDD:PyrD, Dihydroorotate FT dehydrogenase [Nucleotide transport and metabolism]" FT /inference="protein motif:COG:COG0167 Dihydroorotate FT dehydrogenase; F Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.20.90 no FT description" FT /inference="protein motif:HMMPanther:PTHR11882 FT DIHYDROOROTATE DEHYDROGENASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11882:SF5 FT DIHYDROOROTATE DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF01180 DHO_dh FT InterPro:IPR001295 Dihydroorotate dehydrogenase FT GO:Molecular Function:dihydroorotate dehydrogenase activity FT (GO:0004152), Biological Process:'de novo' pyrimidine base FT biosynthesis (GO:0006207)" FT /inference="protein motif:HMMPIR:PIRSF000164 Dihydroorotate FT oxidase InterPro:IPR012135 Dihydroorotate oxidase FT GO:Molecular Function:dihydroorotate oxidase activity FT (GO:0004158), Biological Process:UMP biosynthesis FT (GO:0006222)" FT /inference="protein motif:HMMTigr:TIGR01037 FT pyrD_sub1_fam:dihydroorotate dehydroge InterPro:IPR005720 FT Dihydroorotate dehydrogenase 1 GO:Molecular FT Function:dihydroorotate oxidase activity (GO:0004158), FT Cellular Component:cytoplasm (GO:0005737), Biological FT Process:'de novo' pyrimidine base biosynthesis FT (GO:0006207)" FT /inference="protein motif:ProfileScan:PS50264 FMN_ENZYMES FT InterPro:IPR003009 FMN/related compound-binding core" FT /inference="protein motif:ScanRegExp:PS00911 DHODEHASE_1 FT InterPro:IPR001295 Dihydroorotate dehydrogenase FT GO:Molecular Function:dihydroorotate dehydrogenase activity FT (GO:0004152), Biological Process:'de novo' pyrimidine base FT biosynthesis (GO:0006207)" FT /inference="protein motif:ScanRegExp:PS00912 DHODEHASE_2 FT InterPro:IPR001295 Dihydroorotate dehydrogenase FT GO:Molecular Function:dihydroorotate dehydrogenase activity FT (GO:0004152), Biological Process:'de novo' pyrimidine base FT biosynthesis (GO:0006207)" FT /inference="protein motif:superfamily:SSF51395 FMN-linked FT oxidoreductases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32858.1" FT /translation="MASLEVKLFGIRFENPLILASGINDKVPEQWIRAHEEGAGGVVTK FT SIGIEPRKGYDNPTIVELPCGLINAMGLPNPGWKGFLEMVEGYTFDFPLIVSIFGGTPE FT EFAFLAEKLSDVADAFELNLSCPHAKGYGMEIGQNPENVYEVVKAVKDATDRPVIAKLT FT PNIDDITKLGLAAEKAGADAVSAINTLKAIAIDIYARRPILSNRVGGYSGPGVKPVALR FT AVYDLAKVLDIPVIGIGGITTWQDAVEFLLAGASALQIGTAVSLRGWKVFREINEGIKA FT YLESEGFSSVSEIVGLALE" FT gene 337503..337805 FT /locus_tag="TGAM_r010" FT /note="tg_7sRNA" FT ncRNA 337503..337805 FT /locus_tag="TGAM_r010" FT /product="7S RNA Signal recognition particle. Structural FT RNA" FT /ncRNA_class="SRP_RNA" FT gene 337923..339368 FT /gene="pdha" FT /locus_tag="TGAM_0357" FT /note="tg0357" FT CDS 337923..339368 FT /codon_start=1 FT /transl_table=11 FT /gene="pdha" FT /locus_tag="TGAM_0357" FT /product="Proline dehydrogenase, alpha subunit (pdha)" FT /db_xref="GOA:C5A3P7" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR006058" FT /db_xref="InterPro:IPR012675" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:C5A3P7" FT /inference="protein motif:CDD:AhpF, Alkyl hydroperoxide FT reductase, large subunit [Posttranslational modification, FT protein turnover, chaperones]" FT /inference="protein motif:CDD:GltD, NADPH-dependent FT glutamate synthase beta chain and related oxidoreductases FT [Amino acid transport and metabolism / General function FT prediction only]" FT /inference="protein motif:CDD:HcaD, Uncharacterized FT NAD(FAD)-dependent dehydrogenases [General function FT prediction only]" FT /inference="protein motif:CDD:Lpd, Pyruvate/2-oxoglutarate FT dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) FT component, and related enzymes [Energy production and FT conversion]" FT /inference="protein motif:CDD:NirB, NAD(P)H-nitrite FT reductase [Energy production and conversion]" FT /inference="protein motif:CDD:Pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:CDD:TrxB, Thioredoxin reductase FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:COG:COG0446 Uncharacterized FT NAD(FAD)-dependent dehydrogenases; R General function FT prediction only" FT /inference="protein motif:FPrintScan:PR00368 FADPNR FT InterPro:IPR013027 FAD-dependent pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:FPrintScan:PR00411 PNDRDTASEI FT InterPro:IPR001100 Pyridine nucleotide-disulphide FT oxidoreductase, class I GO:Biological Process:electron FT transport (GO:0006118), Molecular Function:oxidoreductase FT activity (GO:0016491)" FT /inference="protein motif:FPrintScan:PR00419 ADXRDTASE FT InterPro:IPR000759 Adrenodoxin reductase GO:Biological FT Process:electron transport (GO:0006118)" FT /inference="protein motif:FPrintScan:PR00420 RNGMNOXGNASE FT InterPro:IPR003042 Aromatic-ring hydroxylase GO:Biological FT Process:electron transport (GO:0006118), Biological FT Process:metabolism (GO:0008152), Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:Gene3D:G3D.3.10.20.30 no FT description InterPro:IPR012675 2Fe-2S Ferredoxin-like fold FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.50.50.60 no FT description" FT /inference="protein motif:HMMPanther:PTHR11632 REDUCTASE FT FLAVOPROTEIN SUBUNIT-RELATED" FT /inference="protein motif:HMMPanther:PTHR11632:SF5 FUMARATE FT REDUCTASE FLAVOPROTEIN SUBUNIT" FT /inference="protein motif:HMMPfam:PF07992 Pyr_redox_2 FT InterPro:IPR013027 FAD-dependent pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:ProfileScan:PS50205 NAD_BINDING FT InterPro:IPR000205 NAD-binding site" FT /inference="protein motif:ProfileScan:PS51085 2FE2S_FER_2 FT InterPro:IPR001041 Ferredoxin GO:Molecular FT Function:electron transporter activity (GO:0005489), FT Molecular Function:iron ion binding (GO:0005506), FT Biological Process:electron transport (GO:0006118)" FT /inference="protein motif:ScanRegExp:PS00197 2FE2S_FER_1 FT InterPro:IPR006058 2Fe-2S ferredoxin, iron-sulfur binding FT site GO:Molecular Function:electron transporter activity FT (GO:0005489), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:superfamily:SSF51905 FT FAD/NAD(P)-binding domain" FT /inference="protein motif:superfamily:SSF54292 2Fe-2S FT ferredoxin-like InterPro:IPR001041 Ferredoxin GO:Molecular FT Function:electron transporter activity (GO:0005489), FT Molecular Function:iron ion binding (GO:0005506), FT Biological Process:electron transport (GO:0006118)" FT /protein_id="ACS32859.1" FT /translation="MRLNEHPVLRFKRGREVTIYFEGQPIKAYEGETIATALHAAGIRV FT LNYSPNKKRPRGLFCAIGKCSSCLMVVNGIPNVRSCITLVEDGMRIERQHGRAKLPTKV FT KPPEFKDAKVVKADIIVIGGGPAGLMAAIHASRAGAKVVLIDENPRLGGQLVKQTHKFF FT GKREQFAGVRGVEIAKILEKELRKSGSVEAFLETSAVGIFQEGEEKLVLAVRKERELIE FT FRGRAVIVATGAMERMIPFENNDLPGVYGAGAIQTLMNTYGVKPGDRVLIVGAGNVGLI FT LGYQLIQAGVEVKAIVEAMPRIGGYFVHAAKVRRLGVPILTRHTILRAEGNERVERAVI FT AQLDENWRPIPGTEKTFDVDVIALAVGLRPSIELLHQAGCQIKFVRELGGHVAVRDGWM FT ETTVRGIFVAGDSAGIEEATTAMLEGKIAGIAAALRLGIADESWVEEIERAQRDLDEFR FT SGPFGRRVAEGIRKALLGGVASE" FT gene 339361..339870 FT /gene="pdhf" FT /locus_tag="TGAM_0358" FT /note="tg0358" FT CDS 339361..339870 FT /codon_start=1 FT /transl_table=11 FT /gene="pdhf" FT /locus_tag="TGAM_0358" FT /product="Proline dehydrogenase, gamma subunit (pdhf)" FT /db_xref="GOA:C5A3P8" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A3P8" FT /inference="protein motif:CDD:HycB, Fe-S-cluster-containing FT hydrogenase components 2 [Energy production and FT conversion]" FT /inference="protein motif:COG:COG1142 FT Fe-S-cluster-containing hydrogenase components 2; C Energy FT production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF54862 4Fe-4S FT ferredoxins" FT /protein_id="ACS32860.1" FT /translation="MSEIPAYLKNGYITPEELFSIIPKPSEERLRKGPVAVPECPQEIP FT CAPCREICPTGAISMPTPNDLPIVDYDKCIGCSLCVQICPGLAFFMVHYVGDKARITMP FT HELLPIPERGEEVVLLNRVGEPVGKGKVITVVPREKTKGDTPIITVEVPIELAWEVRAV FT RVERRG" FT gene 339872..340144 FT /gene="pdhx" FT /locus_tag="TGAM_0359" FT /note="tg0359" FT CDS 339872..340144 FT /codon_start=1 FT /transl_table=11 FT /gene="pdhx" FT /locus_tag="TGAM_0359" FT /product="Proline dehydrogenase, delta subunit (pdhx)" FT /db_xref="InterPro:IPR007419" FT /db_xref="UniProtKB/TrEMBL:C5A3P9" FT /inference="protein motif:COG:COG0446 Uncharacterized FT NAD(FAD)-dependent dehydrogenases; R General function FT prediction only" FT /inference="protein motif:HMMPfam:PF04324 Fer2_BFD FT InterPro:IPR007419 BFD-like [2Fe-2S]-binding region" FT /protein_id="ACS32861.1" FT /translation="MAGKTIVCRCNDVTVEEIEALIDSGVTDIEEIKRLLRVGMGPCQG FT RTCIPIVISILARKTGKKPEEIAPPKARVPVRPVRVEVIVGGADE" FT gene 340216..341304 FT /gene="pdhb" FT /locus_tag="TGAM_0360" FT /note="tg0360" FT CDS 340216..341304 FT /codon_start=1 FT /transl_table=11 FT /gene="pdhb" FT /locus_tag="TGAM_0360" FT /product="Proline dehydrogenase, beta subunit (pdhb)" FT /db_xref="GOA:C5A3Q0" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/TrEMBL:C5A3Q0" FT /inference="protein motif:CDD:COG0579, Predicted FT dehydrogenase [General function prediction only]" FT /inference="protein motif:CDD:DadA, Glycine/D-amino acid FT oxidases (deaminating) [Amino acid transport and FT metabolism]" FT /inference="protein motif:CDD:GlpA, Glycerol-3-phosphate FT dehydrogenase [Energy production and conversion]" FT /inference="protein motif:COG:COG0665 Glycine/D-amino acid FT oxidases (deaminating); E Amino acid transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPanther:PTHR13847 FT AMINOMETHYLTRANSFERASE RELATED" FT /inference="protein motif:HMMPanther:PTHR13847:SF30 FT SARCOSINE OXIDASE" FT /inference="protein motif:HMMPfam:PF01266 DAO FT InterPro:IPR006076 FAD dependent oxidoreductase FT GO:Biological Process:electron transport (GO:0006118), FT Molecular Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:superfamily:SSF51905 FT FAD/NAD(P)-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32862.1" FT /translation="MVLFEKNYFGSGSTFRCATGIRAQFTDEANIRLMKYSVERWERLE FT EELGADIGFNQTGYLFLATSEDEVEAFKANIKLQNKFGVPTRLIDMDEAKEIVPILNTE FT PFLAGAWNPKDAKANPFKTLFAYLRRARELGVDAREHTEVVGLEREGDTITVVKFRSKG FT KVESVKVDVVLNACNAWAPLINEMAGLKRDLVPIKAYKHQLVKTEPLERGQAEPLVCPP FT SWNDAYIIQDGEDGGIICGAGIEHEAKSLDDVEPTYDFLRGVLKYAVKIAPPLRYAHIV FT RQWAGFYAKTPDSNPAIGKLLDNFYIAAGFSGHGFMMAPAVAQAMAELISKGRSRVPLD FT WEWYDPYRFERGELRSSAFQIG" FT gene 341395..342072 FT /gene="pyrH" FT /locus_tag="TGAM_0361" FT /note="tg0361" FT CDS 341395..342072 FT /codon_start=1 FT /transl_table=11 FT /gene="pyrH" FT /locus_tag="TGAM_0361" FT /product="Uridylate kinase (pyrH)" FT /EC_number="2.7.4.-" FT /db_xref="GOA:C5A3Q1" FT /db_xref="InterPro:IPR001048" FT /db_xref="InterPro:IPR011817" FT /db_xref="InterPro:IPR011818" FT /db_xref="UniProtKB/Swiss-Prot:C5A3Q1" FT /inference="protein motif:CDD:AAK, Amino Acid Kinases (AAK) FT superfamily, catalytic domain" FT /inference="protein motif:CDD:AAK_AK, AAK_AK:Amino Acid FT Kinase Superfamily (AAK), Aspartokinase (AK)" FT /inference="protein motif:CDD:AAK_AK-DapG-like, FT AAK_AK-DapG-like:Amino Acid Kinase Superfamily (AAK), FT AK-DapG-like" FT /inference="protein motif:CDD:AAK_AKii-LysC-BS, FT AAK_AKii-LysC-BS:Amino Acid Kinase Superfamily (AAK), AKii" FT /inference="protein motif:CDD:AAK_FomA-like, FT AAK_FomA-like:This CD includes a fosfomycin biosynthetic FT gene product, FomA, and similar proteins found in a wide FT range of organisms" FT /inference="protein motif:CDD:AAK_G5K_ProB, FT AAK_G5K_ProB:Glutamate-5-kinase (G5K) catalyzes FT glutamate-dependent ATP cleavage" FT /inference="protein motif:CDD:AAK_UMPK-like, FT AAK_UMPK-like:UMP kinase (UMPK)-like, the FT microbial/chloroplast uridine monophosphate kinase FT (uridylate kinase) enzyme that catalyzes UMP FT phosphorylation and plays a key role in pyrimidine FT nucleotide biosynthesis" FT /inference="protein motif:CDD:AAK_UMPK-MosAB, FT AAK_UMPK-MosAB:This CD includes the alpha and beta subunits FT of the Mo storage protein (MosA and MosB) which are related FT to uridine monophosphate kinase (UMPK) enzymes that FT catalyze the phosphorylation of UMP by ATP, yielding UDP, FT and playing a key role in pyrimidine nucleotide FT biosynthesis" FT /inference="protein motif:CDD:AAK_UMPK-PyrH-Ec, UMP kinase FT (UMPK)-Ec, the microbial/chloroplast uridine monophosphate FT kinase (uridylate kinase) enzyme that catalyzes UMP FT phosphorylation and plays a key role in pyrimidine FT nucleotide biosynthesis" FT /inference="protein motif:CDD:AAK_UMPK-PyrH-Pf, FT AAK_UMPK-PyrH-Pf:UMP kinase (UMPK)-Pf, the mostly archaeal FT uridine monophosphate kinase (uridylate kinase) enzymes FT that catalyze UMP phosphorylation and play a key role in FT pyrimidine nucleotide biosynthesis" FT /inference="protein motif:CDD:AA_kinase, Amino acid kinase FT family" FT /inference="protein motif:CDD:LysC, Aspartokinases [Amino FT acid transport and metabolism]" FT /inference="protein motif:CDD:ProB, Glutamate 5-kinase FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PyrH, Uridylate kinase FT [Nucleotide transport and metabolism]" FT /inference="protein motif:COG:COG0528 Uridylate kinase; F FT Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.1160.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11063 FT GAMMA-GLUTAMYL PHOSPHATE REDUCTASE/GLUTAMATE 5-KINASE" FT /inference="protein motif:HMMPanther:PTHR11063:SF3 DELTA FT 1-PYRROLINE-5-CARBOXYLATE SYNTHETASE" FT /inference="protein motif:HMMPfam:PF00696 AA_kinase FT InterPro:IPR001048 Aspartate/glutamate/uridylate kinase FT GO:Biological Process:amino acid biosynthesis (GO:0008652)" FT /inference="protein motif:HMMPIR:PIRSF005650 Uridylate FT kinase InterPro:IPR011817 Uridylate kinase GO:Biological FT Process:pyrimidine nucleotide biosynthesis (GO:0006221), FT Molecular Function:uridylate kinase activity (GO:0009041)" FT /inference="protein motif:HMMTigr:TIGR02076 FT pyrH_arch:uridylate kinase, putative InterPro:IPR011818 FT Uridylate kinase, putative GO:Biological Process:pyrimidine FT nucleotide biosynthesis (GO:0006221), Molecular FT Function:uridylate kinase activity (GO:0009041)" FT /inference="protein motif:superfamily:SSF53633 Carbamate FT kinase-like InterPro:IPR001048 FT Aspartate/glutamate/uridylate kinase GO:Biological FT Process:amino acid biosynthesis (GO:0008652)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32863.1" FT /translation="MRIVFDIGGSVLVPEDPDVEFIKAIAYELIKISEDHEVAVVVGGG FT KVARKYIKAAKTFTPNETFKDYIGIHITRANAMLLIAALGEKAYPFVIQDFRKAWEVIQ FT LKKIPIMGGTHPGHTTDAVSALLAEYLQADLLVVVTNVDGVYDSDPRKNPNARKLDRIT FT PEQLVEIAMEAESKAGGSGVVDALAAKFIQRGRIRTYIVGKKDAYHLFDVVRGKHSGTV FT VEP" FT gene 342104..342388 FT /locus_tag="TGAM_0362" FT /note="tg0362" FT CDS 342104..342388 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0362" FT /product="Transcription regulator, copG/nikR family" FT /db_xref="GOA:C5A3Q2" FT /db_xref="InterPro:IPR002145" FT /db_xref="InterPro:IPR010985" FT /db_xref="InterPro:IPR013321" FT /db_xref="UniProtKB/TrEMBL:C5A3Q2" FT /inference="protein motif:COG:COG3609 Predicted FT transcriptional regulators containing the CopG/Arc/MetJ FT DNA-binding domain; K Transcription" FT /inference="protein motif:HMMPfam:PF01402 RHH_1 FT InterPro:IPR002145 CopG-like DNA-binding GO:Molecular FT Function:DNA binding (GO:0003677), Biological FT Process:regulation of transcription, DNA-dependent FT (GO:0006355)" FT /inference="protein motif:superfamily:SSF47598 Met FT repressor-like InterPro:IPR010985 Ribbon-helix-helix" FT /protein_id="ACS32864.1" FT /translation="MSYGDCMSSTDKVSVRFPSGLMRQIDELVEKGEFSSRSELIKEAV FT RFFLLHYESPEELWETYKLLARERRIPQEEEIEKLLEEVDEEWKRARSS" FT gene 342364..342825 FT /locus_tag="TGAM_0363" FT /note="tg0363" FT CDS 342364..342825 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0363" FT /product="Nucleotide binding protein, putative, containing FT PIN domain" FT /note="Belongs to DUF132 family" FT /db_xref="InterPro:IPR002850" FT /db_xref="InterPro:IPR006596" FT /db_xref="UniProtKB/TrEMBL:C5A3Q3" FT /inference="protein motif:BlastProDom:PD013066 FT Q59074_METJA_Q59074; InterPro:IPR002850 Protein of unknown FT function DUF132" FT /inference="protein motif:CDD:COG1569, Predicted nucleic FT acid-binding protein, contains PIN domain [General function FT prediction only]" FT /inference="protein motif:COG:COG1569 Predicted nucleic FT acid-binding protein, contains PIN domain; R General FT function prediction only" FT /inference="protein motif:HMMSmart:SM00670 no description FT InterPro:IPR006596 Nucleotide binding protein, PINc" FT /inference="protein motif:HMMTigr:TIGR00305 FT TIGR00305:conserved hypothetical protein T FT InterPro:IPR002850 Protein of unknown function DUF132" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32865.1" FT /translation="MEARKVVLDTNVVITAAINPFGSSGKVMDLIVGKKVVSYTSEAIL FT EELRFKLTSEKVLKYLESRVYALWIYRVFRASSIVVNPRVRFEVSPDSEDNKFFDVVYS FT AKADFLISLDKKHVLKLRDENGRFALKGHEFLILTPAEFLEVVGRHDNP" FT gene 342950..344269 FT /gene="nox" FT /locus_tag="TGAM_0364" FT /note="tg0364" FT CDS 342950..344269 FT /codon_start=1 FT /transl_table=11 FT /gene="nox" FT /locus_tag="TGAM_0364" FT /product="NADH oxidase (NOXase) (nox)" FT /EC_number="1.6.99.3" FT /db_xref="GOA:C5A3Q4" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016156" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:C5A3Q4" FT /inference="protein motif:BlastProDom:PD000139 FT Q9V0X9_PYRAB_Q9V0X9; InterPro:IPR001327 Pyridine FT nucleotide-disulphide oxidoreductase, NAD-binding region FT GO:Biological Process:electron transport (GO:0006118), FT Molecular Function:disulfide oxidoreductase activity FT (GO:0015036)" FT /inference="protein motif:CDD:HcaD, Uncharacterized FT NAD(FAD)-dependent dehydrogenases [General function FT prediction only]" FT /inference="protein motif:CDD:Lpd, Pyruvate/2-oxoglutarate FT dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) FT component, and related enzymes [Energy production and FT conversion]" FT /inference="protein motif:CDD:Ndh, NADH dehydrogenase, FT FAD-containing subunit [Energy production and conversion]" FT /inference="protein motif:CDD:NirB, NAD(P)H-nitrite FT reductase [Energy production and conversion]" FT /inference="protein motif:CDD:Pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:CDD:Pyr_redox_dim, Pyridine FT nucleotide-disulphide oxidoreductase, dimerisation domain" FT /inference="protein motif:CDD:TrxB, Thioredoxin reductase FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:COG:COG0446 Uncharacterized FT NAD(FAD)-dependent dehydrogenases; R General function FT prediction only" FT /inference="protein motif:FPrintScan:PR00368 FADPNR FT InterPro:IPR013027 FAD-dependent pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:FPrintScan:PR00411 PNDRDTASEI FT InterPro:IPR001100 Pyridine nucleotide-disulphide FT oxidoreductase, class I GO:Biological Process:electron FT transport (GO:0006118), Molecular Function:oxidoreductase FT activity (GO:0016491)" FT /inference="protein motif:Gene3D:G3D.3.30.390.30 no FT description" FT /inference="protein motif:Gene3D:G3D.3.50.50.60 no FT description" FT /inference="protein motif:HMMPanther:PTHR11493 FT DIHYDROLIPOAMIDE DEHYDROGENASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11493:SF52 NADH FT OXIDASE" FT /inference="protein motif:HMMPfam:PF02852 Pyr_redox_dim FT InterPro:IPR004099 Pyridine nucleotide-disulphide FT oxidoreductase dimerisation region GO:Cellular FT Component:cytoplasm (GO:0005737), Biological FT Process:electron transport (GO:0006118), Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:HMMPfam:PF07992 Pyr_redox_2 FT InterPro:IPR013027 FAD-dependent pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:ProfileScan:PS50205 NAD_BINDING FT InterPro:IPR000205 NAD-binding site" FT /inference="protein motif:superfamily:SSF51905 FT FAD/NAD(P)-binding domain" FT /inference="protein motif:superfamily:SSF55424 FT FAD/NAD-linked reductases, dimerisation (C-terminal) FT domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32866.1" FT /translation="MKIVVIGSGTAGSNFALFMRKLDRKAEIVVIGKEGTMQYSPCALP FT HVISGTIEKPEDVIVFPNEFYERQKIELMLNTEAKAIDRERKVVITDKGEVPYDKLVLA FT VGSKAFIPPIKGVENEGVFTLKSLDDVRRIKAYIADRKPKKAVVIGAGLIGLEGAEAFA FT KLGIEVLVVELMDRLMPTMLDKDTAKLVQKEMEANGVSFRFGVGVSEIIGSPVEAVRIG FT DEEVPAELVLVATGVRANTDLAKEAGLEVNRGIVVNEHLQTSDPDIYAIGDCAEVIDAV FT TGERTLSQLGTSAVRMAKVAAEHIAGKDVSFRPVFNTAITELFGLEIGTFGITEERAKK FT EGIEVAVGKFKGSTKPEYYPGGKPITVKLIFRKSDRKLVGAQIVGGERVWGRIMTLSAL FT AQKGATVEDVVYLETAYAPPISPTIDPITVAGEMALRKLR" FT gene 344344..346098 FT /locus_tag="TGAM_0365" FT /note="tg0365" FT CDS 344344..346098 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0365" FT /product="Metal-dependent hydrolase" FT /note="Contains 1 Endonuclease/exonuclease/phosphatase FT (PF03372) domain; 10 probable transmembrane helices FT predicted by modhmm" FT /db_xref="GOA:C5A3Q5" FT /db_xref="InterPro:IPR005135" FT /db_xref="UniProtKB/TrEMBL:C5A3Q5" FT /inference="protein motif:CDD:ElsH, Metal-dependent FT hydrolase [General function prediction only]" FT /inference="protein motif:CDD:Exo_endo_phos, FT Endonuclease/Exonuclease/phosphatase family" FT /inference="protein motif:Gene3D:G3D.3.60.10.10 no FT description" FT /inference="protein motif:HMMPfam:PF03372 Exo_endo_phos FT InterPro:IPR005135 Endonuclease/exonuclease/phosphatase" FT /inference="protein motif:superfamily:SSF56219 DNase FT I-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32867.1" FT /translation="MMGMKVRERDKLLLGLGTGVLLASSLRVFVAGAYASLEKTFFYGM FT KFPSGLGILLFLFAALLVGRLSRKSGAVIMAAYALALLATDATEYVHLIAAFALPVSLA FT LVKELDVKYLAMGLVADLSLRVLAVGAEPADFPYTRVLLVLFILLGAFALWKEPGTLKR FT PGFGLYAFAALLELGLIYPNAVMRYSGMTVYYLPEFVGFSLLIALAILLGPYLARKPTV FT AMALLIIGSATLFLKPLSLVGLPLALASTIALVENSKGSRGGIIGAVYLFLVATLALGA FT YVGRDIGLPFMEDRLEVLILVVSVIYALSAYGKSAEISLPSVKEIAGPLLGVVMASIVV FT MALFHAGPTYMGAKKDVLVWTYNVHQGFGPYDGTFNGYELVNLLAEQKPDIWFAQEVVG FT GMIGNGYQDVPLFVSAHLGYAYEYKPAVEGTYGIAVFSHWHMKTESELNLPSVGEARPA FT QKVSIEELGITVVNVHMGLSEEERAMQAEELLKFAEASPVAQVIAGDTNAEPNERAIEI FT LTRDYRDAFPERPPYTFLWERNGVVDKENIDYILLKNDWPAEVKDDGCLCDVLVSDHRP FT VWAVIELP" FT gene 346129..346668 FT /gene="kptA" FT /locus_tag="TGAM_0366" FT /note="tg0366" FT CDS 346129..346668 FT /codon_start=1 FT /transl_table=11 FT /gene="kptA" FT /locus_tag="TGAM_0366" FT /product="RNA 2'-phosphotransferase (kptA)" FT /EC_number="2.7.-.-" FT /db_xref="GOA:C5A3Q6" FT /db_xref="InterPro:IPR002745" FT /db_xref="InterPro:IPR022928" FT /db_xref="UniProtKB/TrEMBL:C5A3Q6" FT /inference="protein motif:CDD:KptA, RNA:NAD FT 2'-phosphotransferase [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:PTS_2-RNA, RNA FT 2'-phosphotransferase, Tpt1 / KptA family" FT /inference="protein motif:COG:COG1859 RNA:NAD FT 2'-phosphotransferase; J Translation, ribosomal structure FT and biogenesis" FT /inference="protein motif:HMMPanther:PTHR12684 PUTATIVE FT PHOSPHOTRANSFERASE InterPro:IPR002745 Phosphotransferase FT KptA/Tpt1 GO:Biological Process:tRNA splicing (GO:0006388), FT Molecular Function:transferase activity, transferring FT phosphorus-containing groups (GO:0016772)" FT /inference="protein motif:HMMPanther:PTHR12684:SF2 PUTATIVE FT PHOSPHOTRANSFERASE" FT /inference="protein motif:HMMPfam:PF01885 PTS_2-RNA FT InterPro:IPR002745 Phosphotransferase KptA/Tpt1 FT GO:Biological Process:tRNA splicing (GO:0006388), Molecular FT Function:transferase activity, transferring FT phosphorus-containing groups (GO:0016772)" FT /inference="protein motif:superfamily:SSF56399 FT ADP-ribosylation" FT /protein_id="ACS32868.1" FT /translation="MPQRVKVSKLMAYILRHSPGEFGLKPDREGFVPLDELVRALQTVY FT PDVTEELVREIVERDAKGRYEIRDGKIRARYGHSFKVKLDHEEDTESRVLYHGTPRRNL FT TRIMREGLKPMRRQFVHLSTSREEAIETGRRHGKDVVLLIIDADCLRRKGLKIYKAGKN FT VRIVEKVPPECITLAV" FT gene complement(346652..347887) FT /locus_tag="TGAM_0367" FT /note="tg0367" FT CDS complement(346652..347887) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0367" FT /product="Tetracycline resistance protein, putative, major FT facilitator superfamily" FT /note="12 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3Q7" FT /db_xref="InterPro:IPR001958" FT /db_xref="InterPro:IPR005828" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="InterPro:IPR020846" FT /db_xref="UniProtKB/TrEMBL:C5A3Q7" FT /inference="protein motif:CDD:DUF894, Bacterial protein of FT unknown function (DUF894)" FT /inference="protein motif:COG:COG0477 Permeases of the FT major facilitator superfamily; G Carbohydrate transport and FT metabolism" FT /inference="protein motif:FPrintScan:PR01035 TCRTETA FT InterPro:IPR001958 Tetracycline resistance protein FT GO:Molecular Function:tetracycline:hydrogen antiporter FT activity (GO:0015520), Biological Process:tetracycline FT transport (GO:0015904), Cellular Component:integral to FT membrane (GO:0016021)" FT /inference="protein motif:HMMPanther:PTHR10074 DRUG EFFLUX FT TRANSPORTER-RELATED" FT /inference="protein motif:HMMPanther:PTHR10074:SF3 DRUG FT EFFLUX PROTEIN-RELATED" FT /inference="protein motif:HMMPfam:PF07690 MFS_1 FT InterPro:IPR011701 Major facilitator superfamily MFS_1" FT /inference="protein motif:ProfileScan:PS50850 MFS FT InterPro:IPR007114 Major facilitator superfamily FT GO:Molecular Function:transporter activity (GO:0005215), FT Biological Process:transport (GO:0006810), Cellular FT Component:integral to membrane (GO:0016021)" FT /protein_id="ACS32869.1" FT /translation="MRKTTRITQGLHEKRAKVTVTKVKRRNIIVLAVSMFIANVAFGMA FT FPYLGVYMRLLGASMFMVGLLSVAFNLTSTVFQYPFGWLSDSTGNRKGFIAFGVASTGL FT FYVAMAFVGSATGVLILRTLQGIFGSAMMPAHSALISELSTRAGSIFGLFNSIENAGFM FT VGNFLGSAIVRYFGIRKLFLISGFLLFVSAWIVLLIRERPTGRRSILGMILVQEGRESW FT RATVKGSAFRKLMRGHLGLFYVTVFLVMIASGQFYGVSSVYFKETFGEWSVGVIFGIES FT LAAALTGYFLGKLIDRYGAKKFYLIAIAGYGLAFLLYAVVRNVWLVFGIAFLSGVKWVL FT TINSTSAYVAQNVSVRERAQGMGLLNAMMSLGWVVGPLIGGYLSGISFQLNFMSTLVPL FT GLAFVLALRLPG" FT gene 348235..350244 FT /locus_tag="TGAM_0368" FT /note="tg0368" FT CDS 348235..350244 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0368" FT /product="Subtilisin-like serine protease (subtilase)" FT /note="Belongs to S8 (subtilisin) family; 2 probable FT transmembrane helices predicted by modhmm" FT /db_xref="GOA:C5A3Q8" FT /db_xref="InterPro:IPR000209" FT /db_xref="InterPro:IPR007280" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR015500" FT /db_xref="InterPro:IPR017319" FT /db_xref="InterPro:IPR022398" FT /db_xref="InterPro:IPR023827" FT /db_xref="InterPro:IPR023828" FT /db_xref="UniProtKB/TrEMBL:C5A3Q8" FT /inference="protein motif:CDD:AprE, Subtilisin-like serine FT proteases [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:Peptidase_S8, Subtilase FT family" FT /inference="protein motif:COG:COG1404 Subtilisin-like FT serine proteases; O Posttranslational modification, protein FT turnover, chaperones" FT /inference="protein motif:FPrintScan:PR00723 SUBTILISIN FT InterPro:IPR000209 Peptidase S8 and S53, subtilisin, kexin, FT sedolisin GO:Molecular Function:subtilase activity FT (GO:0004289), Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:Gene3D:G3D.3.40.50.200 no FT description" FT /inference="protein motif:HMMPanther:PTHR10795 FT SUBTILISIN-RELATED SERINE PROTEASE" FT /inference="protein motif:HMMPanther:PTHR10795:SF48 gb FT def:alkaline serine protease [pyrococcus furiosus dsm FT 3638]" FT /inference="protein motif:HMMPfam:PF00082 Peptidase_S8 FT InterPro:IPR000209 Peptidase S8 and S53, subtilisin, kexin, FT sedolisin GO:Molecular Function:subtilase activity FT (GO:0004289), Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:HMMPfam:PF04151 PPC FT InterPro:IPR007280 Peptidase, archaeal and bacterial FT C-terminal GO:Molecular Function:peptidase activity FT (GO:0008233)" FT /inference="protein motif:ScanRegExp:PS00136 SUBTILASE_ASP FT InterPro:IPR000209 Peptidase S8 and S53, subtilisin, kexin, FT sedolisin GO:Molecular Function:subtilase activity FT (GO:0004289), Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:ScanRegExp:PS00137 SUBTILASE_HIS FT InterPro:IPR000209 Peptidase S8 and S53, subtilisin, kexin, FT sedolisin GO:Molecular Function:subtilase activity FT (GO:0004289), Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:ScanRegExp:PS00138 SUBTILASE_SER FT InterPro:IPR000209 Peptidase S8 and S53, subtilisin, kexin, FT sedolisin GO:Molecular Function:subtilase activity FT (GO:0004289), Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:superfamily:SSF52743 FT Subtilisin-like" FT /inference="protein motif:superfamily:SSF89260" FT /inference="protein motif:superfamily:SSF89260 FT Collagen-binding domain" FT /protein_id="ACS32870.1" FT /translation="MKRVVMLFALVLVGLMMGTTAAAPAPAVNTGYYGDKDYGLLTPSL FT FKKIQHMGINQEIETIIMFDSQAEKERAVRALKSLGVEIKYNYHIIPALAVKMKTKDLL FT LISGLARGGFFGSVHVSGIQFIQEDYKVKVAVETEGLDESAAQVMATNMWNLGYDGSGI FT TIAIIDTGIDASHPDLQGKVIGWKDFVNGKTSPYDDQGHGTHVASIAAGTGAASNGKYK FT GMAPGAKLVGIKVLGADGSGSISDIIEGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDS FT LSQAVNNAWDAGIVVCVAAGNSGPDKYTVGSPAAASKVITVGAVDKYDTITDFSSRGPT FT ADGRLKPEVVAPGNWIIAARASGTKLTDVTIGDYYVAAPGTSMATPHVAGISALILQAH FT PSWSPDQVKKALIETADIVKPDEIADIAYGAGRVNAYKAAHYDSYAKLTFTGYVADKGT FT ETHEFTISGASFVTATLYWDNAKSDIDLYLYDPNGNQVDYSYTAYYGFEKVGYYNPSAG FT TWTIKVVSYSGSANYQVDVVSDGSLGQPGSGGDNGGDNGGTEPAPEPEPQPTVDEKTFT FT GSVSYHDYNVHQMTVNSGATKITGDLVGHSYDDLDLYLYDNNQNLVDRSENYGSSEHVE FT YSNPAPGTWYFVVYAYYTYYWTASYQLDAKVYYG" FT gene 350280..352025 FT /locus_tag="TGAM_0369" FT /note="tg0369" FT CDS 350280..352025 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0369" FT /product="Squalene cyclase, putative" FT /note="Contains Terpenoid cylases/Protein prenyltransferase FT domain (SSF48239); 2 probable transmembrane helices FT predicted by modhmm" FT /db_xref="InterPro:IPR008930" FT /db_xref="UniProtKB/TrEMBL:C5A3Q9" FT /inference="protein motif:COG:COG1657 Squalene cyclase; I FT Lipid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.1.50.10.20 no FT description" FT /inference="protein motif:superfamily:SSF48239 Terpenoid FT cylases/Protein prenyltransferases InterPro:IPR008930 FT Terpenoid cylases/protein prenyltransferase alpha-alpha FT toroid" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32871.1" FT /translation="MIVMKYKVLAVTLTFLFLLSLPLTSASTVEKPYVYVPTVPETSLA FT VIALYRAGDYAPVLEGCEWLMAIKTPFDSWGRVYGAEHEAKFTGLALMALIRGESIARG FT RYTETINGAAYWLMFKQKPDGSWEDYLGTAIAVAALEEFINSKYVDPNMPRLRDQAKKA FT VERGRAWLSLHRPKTDAEFAFGAIALRNRDLAEEMNETAFKYFALSYLGSHPEVPSNYS FT PKGPLETALLLYATGDERYLKELLSMEHFGFWGTLRYNPVELLEASYVSGFSEMREIAC FT PYLEQIRPQLRFEWERVVYAKYFLSCGMDVELPNESAYSSLKPWQIAEIARIKAILGKP FT YTREVDYLLNHRNGTGWGDFYNTEYVVWVLHDLNVTLDYSPILDSLEMELTNTSPTYYY FT AYALIVFKEFGRENALNRTLEILAERESPEGGWGYAPGAPAGIKSTSTVLWGLEEAGLF FT NTYLHRKGWNFLKRALYVKIPVPERSNGALSVENATLLKIRNGEYAGNASSTVEMDSLD FT GVVYIYTSKNPLAVGAIPVSGFKAESPWRSEKRQYLILVAIVAALGLSFYGIVLFERGR FT REGRQ" FT gene complement(351972..352691) FT /locus_tag="TGAM_0370" FT /note="tg0370" FT CDS complement(351972..352691) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0370" FT /product="Nucleotidyltransferase, putative" FT /db_xref="GOA:C5A3R0" FT /db_xref="InterPro:IPR002934" FT /db_xref="UniProtKB/TrEMBL:C5A3R0" FT /inference="protein motif:COG:COG1708 Predicted FT nucleotidyltransferases; R General function prediction FT only" FT /inference="protein motif:Gene3D:G3D.3.30.460.10 no FT description" FT /inference="protein motif:HMMPfam:PF01909 NTP_transf_2 FT InterPro:IPR002934 DNA polymerase, beta-like region FT GO:Molecular Function:nucleotidyltransferase activity FT (GO:0016779)" FT /inference="protein motif:superfamily:SSF81301 FT Nucleotidyltransferase" FT /protein_id="ACS32872.1" FT /translation="MRVKPLAECIRKRIGRVTGLHSLILYGSLVRGDFLPRTSDVDFFA FT VLEDETDPELVLEKITPVLKECSSYLNPVEVDIAWEWLSNLRDPLNSGYPYKFLTVYQR FT DFREHHIVLLGEDVIDLLPEYPLEEIISRRLEDTLKNLKRFKGNRKMLHILAGEAARLV FT AFLNGSTLLKGDVLHTLQELGEGDAVKIYRAYIDGRKLEFEEAFLESFIKRWIKKLKGK FT SLPSLSSPPLKEYDPIK" FT gene complement(352688..353743) FT /locus_tag="TGAM_0371" FT /note="tg0371" FT CDS complement(352688..353743) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0371" FT /product="Predicted methyltransferase" FT /note="Belongs to DUF43 family" FT /db_xref="GOA:C5A3R1" FT /db_xref="InterPro:IPR002723" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR014435" FT /db_xref="UniProtKB/TrEMBL:C5A3R1" FT /inference="protein motif:CDD:COG1568, Predicted FT methyltransferases [General function prediction only]" FT /inference="protein motif:CDD:DUF43, Protein of unknown FT function DUF43" FT /inference="protein motif:COG:COG1568 Predicted FT methyltransferases; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPfam:PF01861 DUF43 FT InterPro:IPR002723 Protein of unknown function DUF43" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32873.1" FT /translation="MKEIVERVKKKTSIPVYERTIENVLSAIQASGDVWRVVDLSEEPL FT PLVVAVVTTLHELGYVTFKDGEVILTESGKRLVEKYGIGARADYTCSHCAGRTVELDAF FT GDLLAEFKEMVKDRPEPVHQFDQAYVTPETTVARIALMHTRGDLENKEVFVLGDDDLTS FT VALMLSGLPKRIAVLDIDERLIRFIEKVADEIGYESIEIFTFDLRKPLPDYALHKFDTF FT ITDPPETVEAIRAFVGRGIATLKGPGCAGYFGITRRESSLDKWREIQRLLLNEFGVVIT FT DIIRNFNEYVNWGYVEETRAWRLLPVKVKPSYNWYKSYMFRIQTLEGSKGFEDEITVGD FT ELYNDEEASTT" FT gene 353848..354585 FT /locus_tag="TGAM_0372" FT /note="tg0372" FT CDS 353848..354585 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0372" FT /product="PP-loop ATPase, MJ1638-related" FT /db_xref="InterPro:IPR012096" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:C5A3R2" FT /inference="protein motif:CDD:COG1365, Predicted ATPase FT (PP-loop superfamily) [General function prediction only]" FT /inference="protein motif:COG:COG1365 Predicted ATPase FT (PP-loop superfamily); R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.610 no FT description" FT /inference="protein motif:HMMPanther:PTHR11807 N-TYPE ATP FT PYROPHOSPHATASE - RELATED" FT /inference="protein motif:HMMPanther:PTHR11807:SF1 N-TYPE FT ATP PYROPHOSPHATASE - RELATED" FT /inference="protein motif:HMMPfam:PF02568 ThiI FT InterPro:IPR003720 Thiamine biosynthesis protein FT GO:Biological Process:thiamin biosynthesis (GO:0009228)" FT /inference="protein motif:HMMPIR:PIRSF006601 Predicted FT PP-loop ATPase, MJ1638 type InterPro:IPR012096 PP-loop FT ATPase, MJ1638-related" FT /inference="protein motif:superfamily:SSF52402 Adenine FT nucleotide alpha hydrolases-like" FT /protein_id="ACS32874.1" FT /translation="MIVPAGDPVKRYRLRYNLDALERVREAIGESAYSRLRGLLLFRLE FT GSDFEKTPTGVRVALAFSAGSDSTATLKILRWAGFEVVPITAKLPQMDERTLQKVRSEN FT SIFVVVPRYEETMRELIEKGAPICGRCHSMVMEAVERKARELGVRILATGDMLSSGLVS FT IYEKDGLVILNFPAFLALDKGEIIEVIGGEYKLSFGCPLLWELFKRAPSTKRLALQRVL FT RETRARALSSEMAVELMRDVLLR" FT gene 354646..355176 FT /locus_tag="TGAM_0373" FT /note="tg0373" FT CDS 354646..355176 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0373" FT /product="Component of ring hydroxylating complex, FT putative" FT /note="Contains 1 DUF59 domain" FT /db_xref="InterPro:IPR002744" FT /db_xref="UniProtKB/TrEMBL:C5A3R3" FT /inference="protein motif:BlastProDom:PD005595 FT Q9UY52_PYRAB_Q9UY52; InterPro:IPR002744 Protein of unknown FT function DUF59" FT /inference="protein motif:CDD:DUF59, Domain of unknown FT function DUF59" FT /inference="protein motif:COG:COG2151 Predicted FT metal-sulfur cluster biosynthetic enzyme; R General FT function prediction only" FT /inference="protein motif:HMMPanther:PTHR13696 CELL FT DIVISION INHIBITOR MIND-1" FT /inference="protein motif:HMMPanther:PTHR13696:SF4 FT NUCLEOTIDE-BINDING PROTEIN" FT /inference="protein motif:HMMPfam:PF01883 DUF59 FT InterPro:IPR002744 Protein of unknown function DUF59" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32875.1" FT /translation="MVTKEEVEKVVKSVVDEKFIRSIEVDEKGNVTVTLARDTPDIDNV FT LIKLHSELGKLEGIGLITINREREVKEAGNVKITEEMILEKLKEVIDPEIGIDVVNLGL FT IYEVKVNPDNTVYVKMTMTTPGCPLTMWILRAVEDKILEIPGVKDAEIELTFDPPWTPD FT RISPEYKKKLGLY" FT gene 355305..355496 FT /gene="fdx" FT /locus_tag="TGAM_0374" FT /note="tg0374" FT CDS 355305..355496 FT /codon_start=1 FT /transl_table=11 FT /gene="fdx" FT /locus_tag="TGAM_0374" FT /product="Ferredoxin (fdx)" FT /db_xref="GOA:C5A3R4" FT /db_xref="InterPro:IPR001080" FT /db_xref="InterPro:IPR010693" FT /db_xref="InterPro:IPR017896" FT /db_xref="UniProtKB/TrEMBL:C5A3R4" FT /inference="protein motif:COG:COG1141 Ferredoxin; C Energy FT production and conversion" FT /inference="protein motif:FPrintScan:PR00352 3FE4SFRDOXIN FT InterPro:IPR001080 3Fe-4S ferredoxin GO:Molecular FT Function:electron transporter activity (GO:0005489), FT Biological Process:electron transport (GO:0006118)" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:superfamily:SSF54862 4Fe-4S FT ferredoxins" FT /protein_id="ACS32876.1" FT /translation="MAWKVSVDVDTCIGDAICASLCPDVFEMGDDGKAHPIVEVTDLEC FT AQEAAEACPVGAITLEEV" FT gene complement(355645..358557) FT /locus_tag="TGAM_0375" FT /note="tg0375" FT CDS complement(355645..358557) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0375" FT /product="Concanavalin A-related lectin/glucanase, FT putative" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3R5" FT /db_xref="UniProtKB/TrEMBL:C5A3R5" FT /inference="protein motif:Gene3D:G3D.2.60.120.200 no FT description InterPro:IPR013320 Concanavalin A-like FT lectin/glucanase, subgroup" FT /inference="protein motif:superfamily:SSF49899 Concanavalin FT A-like lectins/glucanases InterPro:IPR008985 Concanavalin FT A-like lectin/glucanase" FT /inference="protein motif:superfamily:SSF49899 Concanavalin FT A-like lectinsCleaning InterPro:IPR008985 Concanavalin FT A-like lectin/glucanase" FT /protein_id="ACS32877.1" FT /translation="MWEAGFMKKGLFTVLLIFMLFLPLCPLGGTIVRAEDTSSNTWRDD FT FSYDSLEEMKEAGWNIGREDHTFLREGEVILDNDGTVGTYVLYSKIPSGIYNWIVESKG FT RWIDRSYGSLHVVAKTEKHTYAWWGDGYYHEFVFSRDGKKIYRIPGYNPKMNEWHRFTL FT KKEGNTLYMYFDGQLITTYEETDTAQSQLIIVGMYSSWIGRTAYDYILLKKLPTTQENQ FT NASESKFLEQTLFFDDFESYSVGQFPSSGGWEVLYIGAGKEQQYVSDKYSKSGRKSFRL FT LGTTGWSAVVMKKFSSSATIIGFEFDILFKSKGEGYVDHPGFVCSDCKSWGQYWSVLFD FT HSNAIIYIKTDGGDIVLGSWEPKKWYHIKAIINKDTKTISVWINGVLKADNVKLPKDDW FT NTEDIQGIALTSAWPAQEVFYDNVRVFEMSSTPTETSPSLTKTQIRIFIHNAFSQPLSP FT RGGVFEVIIWNDKHSRIIANISTEYTRGNYKEIVTELPLGDYQMEVYNIPTTKKREFWG FT ALNFTVSKTLDRIDFFRNEPFITGVTKYPDYPNVSTKPIPMVKNPGDTVKRIRLRVIVD FT HDETPPWDHVVETTGILIKQVEKPFLMPSMFIPPKIGSYKVRVLLYTLYRDKYVLTDQL FT DWQPFAEFNSTDVKIVFTPPYLFFLNSSACYKGWIVKDCNASVKRKNYNGGGSIVVMSK FT AVYGGKAFASGLCMMGDKFKAPKTDNYSFKAVLDINTIATILGFKGGVLAGEGASDGEL FT YIVTSVRDLNTREIIYENITPLISIAYPEDIWEETLKDVRNDVLKDIKKELLQKTVEKN FT FAQIYGEEMAKEIASSITSAFRWITFAYSLVTGFYSVNQTINRTIEINYTIPLEERHEY FT IWLFYVYSSSGTAVLGAGVTSGSLIKTDFYLWNVSIIAQPQIIKNTIKTTNTKIKGSVT FT TRENTNKLDGSTKDTSENSICGLGIFLLLMLLSSLIPKKK" FT gene 358690..359121 FT /locus_tag="TGAM_0376" FT /note="tg0376" FT CDS 358690..359121 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0376" FT /product="Hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3R6" FT /protein_id="ACS32878.1" FT /translation="MLMRQSLRILLMLVLAEGLFALSLVPTASAEEEKQTRILIIDGSY FT PSSFLSGVSGYGESSVLDAMDVAKYSEEYLKENFDLFVVTAELSGWSIGWEDYPSLVGK FT LWNAVEAGKSIIIVTYEDYSSPANTVISNCNLDKSFPNT" FT gene 359378..359950 FT /locus_tag="TGAM_0377" FT /note="tg0377" FT CDS 359378..359950 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0377" FT /product="Hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3R7" FT /inference="protein motif:Gene3D:G3D.1.20.1050.30 no FT description" FT /inference="protein motif:superfamily:SSF46579 Prefoldin FT InterPro:IPR009053 Prefoldin" FT /inference="protein motif:superfamily:SSF46589 tRNA-binding FT arm InterPro:IPR010978 tRNA-binding arm" FT /protein_id="ACS32879.1" FT /translation="MHWLTNREIPAPLTLNEMMQKVQTINQTLNTLYSEAQDIKRELEK FT TKQEAQNLPSVSKRIDEVEKRVENNEEQIGELSQHVQDVKMELEKIKQEIEGLPSVSGR FT VNETEKKVENNKKQLIELSQEVTELEQRINQLSKKIDEIEKNSPAETTVVQRETSSKTE FT SSSKTCGVCLLALLPLVVLVSRKIKSK" FT gene complement(360284..361456) FT /gene="nadC-1" FT /locus_tag="TGAM_0378" FT /note="tg0378" FT CDS complement(360284..361456) FT /codon_start=1 FT /transl_table=11 FT /gene="nadC-1" FT /locus_tag="TGAM_0378" FT /product="Nicotinate-nucleotide pyrophosphorylase (nadC)" FT /EC_number="2.4.2.19" FT /db_xref="GOA:C5A3R8" FT /db_xref="InterPro:IPR002638" FT /db_xref="InterPro:IPR007229" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR022412" FT /db_xref="UniProtKB/TrEMBL:C5A3R8" FT /inference="protein motif:CDD:NAPRTase, Nicotinate FT phosphoribosyltransferase (NAPRTase) family" FT /inference="protein motif:CDD:NAPRTase_A, Nicotinate FT phosphoribosyltransferase (NAPRTase), subgroup A" FT /inference="protein motif:CDD:NAPRTase_B, Nicotinate FT phosphoribosyltransferase (NAPRTase), subgroup B" FT /inference="protein motif:CDD:NAPRTase_PncB, Nicotinate FT phosphoribosyltransferase (NAPRTase) family" FT /inference="protein motif:CDD:PncB, Nicotinic acid FT phosphoribosyltransferase [Coenzyme metabolism]" FT /inference="protein motif:CDD:PRTase_typeII, FT Phosphoribosyltransferase (PRTase) type II" FT /inference="protein motif:CDD:QRPTase_C, Quinolinate FT phosphoribosyl transferase, C-terminal domain" FT /inference="protein motif:COG:COG1488 Nicotinic acid FT phosphoribosyltransferase; H Coenzyme transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.20.90 no FT description" FT /inference="protein motif:Gene3D:G3D.3.30.70.310 no FT description" FT /inference="protein motif:HMMPanther:PTHR11098 NICOTINATE FT PHOSPHORIBOSYLTRANSFERASE-RELATED InterPro:IPR007229 FT Nicotinate phosphoribosyltransferase and related FT GO:Molecular Function:nicotinate phosphoribosyltransferase FT activity (GO:0004516), Biological Process:pyridine FT nucleotide biosynthesis (GO:0019363)" FT /inference="protein motif:HMMPanther:PTHR11098:SF1 FT NICOTINATE PHOSPHORIBOSYLTRANSFERASE-RELATED" FT /inference="protein motif:HMMPfam:PF01729 QRPTase_C FT InterPro:IPR002638 Quinolinate phosphoribosyl transferase FT GO:Molecular Function:nicotinate-nucleotide diphosphorylase FT (carboxylating) activity (GO:0004514), Biological FT Process:NAD biosynthesis (GO:0009435)" FT /inference="protein motif:HMMPfam:PF02749 QRPTase_N FT InterPro:IPR002638 Quinolinate phosphoribosyl transferase FT GO:Molecular Function:nicotinate-nucleotide diphosphorylase FT (carboxylating) activity (GO:0004514), Biological FT Process:NAD biosynthesis (GO:0009435)" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /inference="protein motif:superfamily:SSF54675 Quinolinic FT acid phosphoribosyltransferase (Nicotinate-nucleotide FT pyrophosphorylase, NadC), N-terminal domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32880.1" FT /translation="MRDFYIAHEDDIKAGKTTDVYFIRTKKILTEKGIHRKVFADVTTT FT SLPHGWKWGVLAGIEEVAKLLEGLPVDVYAMKEGTIFHPYEPVLQIEGYYEEFGVYETA FT LLGMLSQASGIATAALRIKIAANFKPVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVL FT GAEMMGEKPVGTMPHALILTVGDQVKAWKYFDEVVEQEVPRTALVDTLCDEKFEALMAA FT EALGKRLNAVRLDTPGSRRGNFRKIIEEVRWELDLRGYDWVKIFVSGGLDEESIKEIVD FT VADAFGVGSAIASAKPIDFSLDIVEVDGKPITKRGKLSGRKQVYRCENGHYHRVPSDKK FT LERCPVCGARVEPLLQPLIENGEIVAELPKARKIREYVLEQVKKFKLGIE" FT gene complement(361582..362484) FT /locus_tag="TGAM_0379" FT /note="tg0379" FT CDS complement(361582..362484) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0379" FT /product="Metallo-hydrolase/oxidoreductase" FT /db_xref="GOA:C5A3R9" FT /db_xref="InterPro:IPR001279" FT /db_xref="InterPro:IPR014426" FT /db_xref="UniProtKB/Swiss-Prot:C5A3R9" FT /inference="protein motif:CDD:COG2248, Predicted hydrolase FT (metallo-beta-lactamase superfamily) [General function FT prediction only]" FT /inference="protein motif:COG:COG2248 Predicted hydrolase FT (metallo-beta-lactamase superfamily); R General function FT prediction only" FT /inference="protein motif:Gene3D:G3D.3.60.15.10 no FT description" FT /inference="protein motif:superfamily:SSF56281 FT Metallo-hydrolase/oxidoreductase" FT /protein_id="ACS32881.1" FT /translation="MRVIPLASESLGVRSLATFVEAGGIKILIDPGVALGPKRYGLPPA FT KIELETLQKMRRKIQGYARRADVVTISHYHYDHHTPFFEGLYESSSEEYAREIYAGKLL FT LIKHPRENINFSQRKRAWAFLKNAEPIARRIEFADGRAFDLGGVTLEFSPAVPHGSEGS FT RLGFVVMVLIDDGSERIIHASDIQLLNRKAVEWIIEKNPDLLITGGPPTYLGKRAEGSW FT ETGIKNLNEIIRETNAEIILDHHIVRDKRYPEFFDELEKRPKTFAGFLKVEDKPLEAYR FT RELHKRERGESVELPFRVG" FT gene complement(362508..363635) FT /locus_tag="TGAM_0380" FT /note="tg0380" FT CDS complement(362508..363635) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0380" FT /product="Conserved hypothetical protein" FT /note="Contains DUF917 domain" FT /db_xref="InterPro:IPR010318" FT /db_xref="InterPro:IPR024071" FT /db_xref="UniProtKB/TrEMBL:C5A3S0" FT /inference="protein motif:CDD:DUF917, Protein of unknown FT function (DUF917)" FT /inference="protein motif:COG:COG3535 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF06032 DUF917 FT InterPro:IPR010318 Protein of unknown function DUF917" FT /protein_id="ACS32882.1" FT /translation="MKVLDEADLRDIILGATLFGTGGGGDPKVGWHIVKKTLRRGGEFR FT LAELGEIKKGAIVAMPYSVGSLSPREVTSAYPNGTVTRSFELLEEYLGESFAGVIATEL FT GGANTARALVVGALLGKVVIDADAAGRAVPELQHSTYHLLGMPMTPFSLVTPHGDELIF FT SRVKDDTEAEKIVRAIVSVIGANVGVTSHPFRVSEMGNAVVHGTVSRSLRTGRELRIAR FT EDGKNPEEVLEGLGWTVLFRGIVVGVERREKGGFTVGEFELEGVEGFKNESYRIAFKNE FT NLASWRNGRIDVTVPDLISMVTPEGVPVINSEVKEGSEYIVVGYSAPKIWRTSKGLEIF FT GPKYLGLDSEYVPIEAKRGVKLQYASAKVYTRDSF" FT gene complement(363619..364551) FT /locus_tag="TGAM_0381" FT /note="tg0381" FT CDS complement(363619..364551) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0381" FT /product="ATPase, BadF/BadG/BcrA/BcrD type" FT /db_xref="InterPro:IPR002731" FT /db_xref="UniProtKB/TrEMBL:C5A3S1" FT /inference="protein motif:CDD:BcrAD_BadFG, FT BadF/BadG/BcrA/BcrD ATPase family" FT /inference="protein motif:CDD:COG2971, Predicted FT N-acetylglucosamine kinase [Carbohydrate transport and FT metabolism]" FT /inference="protein motif:COG:COG2971 Predicted FT N-acetylglucosamine kinase; G Carbohydrate transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.30.420.40 no FT description" FT /inference="protein motif:HMMPanther:PTHR12862 FT N-ACETYLGLUCOSAMINE KINASE" FT /inference="protein motif:HMMPfam:PF01869 BcrAD_BadFG FT InterPro:IPR002731 ATPase, BadF/BadG/BcrA/BcrD type" FT /inference="protein motif:superfamily:SSF53067 Actin-like FT ATPase domain" FT /protein_id="ACS32883.1" FT /translation="MILGLDCGGTKTHAVLVDWNGEVLGEGFGGPSNPNASPMETVRAS FT IRKAVSEALGNFRGSVKVACVSAAGTLGGMKDILEGILGELLPGAEIIVKRDYEIAHVA FT CFLFNPGVVLIAGTGSIAYGINEEGKTVRVGGWGHLVGDEGSGFWVGKEGIRAALRAYD FT GRGRGTRLREYMLEYFKANTPDGIIGRIYSSENPKTLLGGFAPYVVKAAREKDEVAMGI FT IKDAVEEIVLTYRAAVRRLGFSSVRDKLAITGGFYFGSRDLLRPLLTRRLEEEFGEKVE FT LREPLMPEAKAAALVALKYMEGKEHEGSR" FT gene complement(364557..365318) FT /locus_tag="TGAM_0382" FT /note="tg0382" FT CDS complement(364557..365318) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0382" FT /product="Hypothetical protein" FT /note="8 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3S2" FT /protein_id="ACS32884.1" FT /translation="MARPFRTTSTRSSGGGDLMRLSRLEVLSLILALMLSLVFLDMFPV FT YIQKDVTIGIFILIEAIISLFLFLLMRWGYSALAGAIAATSLGVLILLRPPAIYIGAVP FT VTWWAIGALYLVIIVVGIALASPMDEKRLNLISLLFASIFLLIGLIAAYEGLKLPLPPD FT VLRGLSAATKMKTWRSMGILLGIMNAGATISMLRGKYLHYLLLISFTLPPLFTVTLSFD FT KITFGVFSQVLLLAQVGVSGLLVSWYMGSRR" FT gene complement(365269..366162) FT /gene="appC" FT /locus_tag="TGAM_0383" FT /note="tg0383" FT CDS complement(365269..366162) FT /codon_start=1 FT /transl_table=11 FT /gene="appC" FT /locus_tag="TGAM_0383" FT /product="ABC-type dipeptide/oligopeptide transport FT permease protein appC (appC)" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3S3" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:C5A3S3" FT /inference="protein motif:CDD:BPD_transp_1, FT Binding-protein-dependent transport system inner membrane FT component" FT /inference="protein motif:CDD:COG4239, ABC-type FT uncharacterized transport system, permease component FT [General function prediction only]" FT /inference="protein motif:CDD:DppB, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:DppC, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:SapC, ABC-type antimicrobial FT peptide transport system, permease component [Defense FT mechanisms]" FT /inference="protein motif:COG:COG1173 ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components; E Amino acid transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:superfamily:SSF63999 Thiamin FT pyrophosphokinase, catalytic domain" FT /protein_id="ACS32885.1" FT /translation="MAMTLREKLEEKWESLKEVSGYVWHHKMGKVGVIILAFLLIMALF FT PGLFTKYTPDWTSDETFVPASWDHPCGIDQEGKDIWAQIVYGTRISLAVGFIAALLTVT FT IGALVGTVAGYYGGIVDEILVFVSDSIMMLPSLLLLIVIAALFSNVWNIWYTIIVIALI FT AWPSTARMVRAQTLQLKNRTYVEAAIALGASKGRIIFRHILPSTIPLLFARATIQIAGF FT IVTVASLTFLGLGDPHNPDWGYVMYTANKNMMMIVMKGMWQWIIVPGVMIALAVIAFVC FT LGEALQDYLNPKLRRR" FT gene complement(366164..367144) FT /gene="appB" FT /locus_tag="TGAM_0384" FT /note="tg0384" FT CDS complement(366164..367144) FT /codon_start=1 FT /transl_table=11 FT /gene="appB" FT /locus_tag="TGAM_0384" FT /product="ABC-type dipeptide/oligopeptide transport FT permease protein appB (appB)" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3S4" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:C5A3S4" FT /inference="protein motif:CDD:BPD_transp_1, FT Binding-protein-dependent transport system inner membrane FT component" FT /inference="protein motif:CDD:COG4174, ABC-type FT uncharacterized transport system, permease component FT [General function prediction only]" FT /inference="protein motif:CDD:DppB, ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:SapB, ABC-type antimicrobial FT peptide transport system, permease component [Defense FT mechanisms]" FT /inference="protein motif:COG:COG0601 ABC-type FT dipeptide/oligopeptide/nickel transport systems, permease FT components; E Amino acid transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /protein_id="ACS32886.1" FT /translation="MARGMVSYTLAKIAHRLLTLIFVILIIYTLLRLAPGTPFDQYLYQ FT GKITEAQYEALLKEWGYRDSFLVGAAKMLYGMATFSLFKMKSPVYNKPIIDLISVRLPY FT TLSLVTAAYFFGAMLGMILGLYCARNRGTLKESAIIWITLGIRSLPVFWLGMVLLYVFA FT FKLGLFPFLTSSELHPRNVFHHMIDWLWHSLLPIIALSKIYAVSYLLTIRNMVSEEYTN FT DYVVSFRAMGLREDYIIERYVLRSIMPPIITMMAIDLGFLFGGAVVTETVFNYPGMGTL FT IYTAIWNKDYPVVLASFYIIAVAVILAITIAEITYAYLDPRIRRG" FT gene complement(367192..368967) FT /gene="appA" FT /locus_tag="TGAM_0385" FT /note="tg0385" FT CDS complement(367192..368967) FT /codon_start=1 FT /transl_table=11 FT /gene="appA" FT /locus_tag="TGAM_0385" FT /product="ABC-type dipeptide/oligopeptide transport FT periplasmic component appA (appA)" FT /db_xref="GOA:C5A3S5" FT /db_xref="InterPro:IPR000914" FT /db_xref="UniProtKB/TrEMBL:C5A3S5" FT /inference="protein motif:CDD:COG4533, ABC-type FT uncharacterized transport system, periplasmic component FT [General function prediction only]" FT /inference="protein motif:CDD:DdpA, ABC-type dipeptide FT transport system, periplasmic component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:OppA, ABC-type oligopeptide FT transport system, periplasmic component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:SBP_bac_5, Bacterial FT extracellular solute-binding proteins, family 5" FT /inference="protein motif:COG:COG0747 ABC-type dipeptide FT transport system, periplasmic component; E Amino acid FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.10.105.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.90.76.10 no FT description" FT /inference="protein motif:HMMPfam:PF00496 SBP_bac_5 FT InterPro:IPR000914 Bacterial extracellular solute-binding FT protein, family 5 GO:Molecular Function:transporter FT activity (GO:0005215), Biological Process:transport FT (GO:0006810)" FT /inference="protein motif:superfamily:SSF53850 Periplasmic FT binding protein-like II" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32887.1" FT /translation="MNRKGLSLLLAVLFLSSIAAAPRVSASAGTELVLAVGKWKTLNPL FT TSSTVYSNVILDKVYEPLIRWDKSGTKVTGALAEKWEFKKEGDNKVLTFHLRKGVKWHD FT GKEVTAEDVKFTIELFKSNPAKFVNPDTLIINGLQEVKVVDKYTVQLVYNQSAAADKFL FT EMAFTTLYIVPKHIWEDKNIISDPTASLDKPEQLVGCGPFKVAEIKPGEYVKLQAFKDY FT YLGKPEVDTAIFKVLTDKNQFAMMVANGELDAGYFYFFGKYLKEFENMVSGDPNVKIYR FT AASKSTHLLAFNFKKWPYNDLKFRKAIAYALPVDKIVQKYYGTDGAKAGSMGFLGPFFG FT EYCKYMPKENLYPYDPDKAKEILDELGFKDVNGDGYRETPDGKPFKIYLLTRAPGDSFF FT RDAIGDEIANYLKDVGIKVDVDKAGDYWDKWGAGSWDMAIVGFVPHKPTDLIWFTSDNP FT GNRVGFSNKTYDETFEEFQRTGDPALAHKLEEILANNVVFIALYHPIVATPYRVDRYKD FT WAPNPRFLTLGYWSLLGNPEKPTTTTSSEKSSTTTSSSKTPSSSTSTTKKGEKGLCGPA FT ALVLFAVLPLLKRRR" FT gene complement(369089..370105) FT /gene="glmS-1" FT /locus_tag="TGAM_0386" FT /note="tg0386" FT CDS complement(369089..370105) FT /codon_start=1 FT /transl_table=11 FT /gene="glmS-1" FT /locus_tag="TGAM_0386" FT /product="Glucosamine--fructose-6-phosphate FT aminotransferase, sugar isomerase (SIS) domain (glmS)" FT /EC_number="2.6.1.16" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A3S6" FT /db_xref="InterPro:IPR001347" FT /db_xref="UniProtKB/TrEMBL:C5A3S6" FT /inference="protein motif:CDD:AgaS, Predicted phosphosugar FT isomerases [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:GlmS, Glucosamine 6-phosphate FT synthetase, contains amidotransferase and phosphosugar FT isomerase domains [Cell envelope biogenesis, outer FT membrane]" FT /inference="protein motif:CDD:GutQ, Predicted sugar FT phosphate isomerase involved in capsule formation [Cell FT envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:RpiR, Transcriptional FT regulators [Transcription]" FT /inference="protein motif:CDD:SIS, SIS domain" FT /inference="protein motif:COG:COG0449 Glucosamine FT 6-phosphate synthetase, contains amidotransferase and FT phosphosugar isomerase domains; M Cell FT wall/membrane/envelope biogenesis" FT /inference="protein motif:Gene3D:G3D.3.40.50.1940 no FT description" FT /inference="protein motif:HMMPanther:PTHR10937 FT GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR10937:SF1 FT GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE" FT /inference="protein motif:HMMPfam:PF01380 SIS FT InterPro:IPR001347 Sugar isomerase (SIS) GO:Molecular FT Function:sugar binding (GO:0005529), Biological FT Process:carbohydrate metabolism (GO:0005975)" FT /inference="protein motif:superfamily:SSF53697 SIS domain" FT /protein_id="ACS32888.1" FT /translation="MPMEFNMIRSIRETPQALDSALKILKEWDPPEKGFRRVIFIGCGS FT SYFSSLAGNHVLLKSSIESHAFPASEFMLHYRELAKGALVVASSRSGKTGEVIEAVKVA FT REKGATIIGVTCNENSKIEEVSDETIAIPNGEEPNIPATKSFSAITLVLQGIALKLLGR FT EEGLNELMAIQQAVERVLARENEYRSIAESLVSRKAFVHLGSGSGYVVALEGALKFRET FT LGLPNEVFPALEFRHGPVALLRGPEKPQPIVIAPEGSSTGALKRLIDDLASRNAEPLVF FT TNSDVFENCVRVPWNGSEELAVIPFIVPIQIVSYYLAVLNNLNPDFPEGLVKVVERF" FT gene 370262..371473 FT /locus_tag="TGAM_0387" FT /note="tg0387" FT CDS 370262..371473 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0387" FT /product="Conserved hypothetical protein" FT /db_xref="GOA:C5A3S7" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:C5A3S7" FT /inference="protein motif:superfamily:SSF51445 FT (Trans)glycosidases" FT /protein_id="ACS32889.1" FT /translation="MYRGTWLHPWDFTGYTIERIAKIGFNHVSMAVRYFEERQDWPGPN FT IIFQNPGRRAYTAEENAVYWDADGNRYSHLPPYLRPERSREAKGDIVERFVNACEENSL FT KSVLWFPTLRWEKAVRDDIGVGMKDVYGSHPGYKRMFLCPSNPLVREALELMVEELSEK FT YDFDEFEFDFIRYPEVPSTHGTPLLSLALSPCFCKYCQERARDYGVDLEEVKRELKELV FT EWHVDYLSNTPYCTDEDYLQAVHSELARFLLEGDLVKKWIKFRAEVIADLLKDLSKIVR FT RNNPGAKVTADLYPPSGSWLLGQDYKTISKIVDGVKVMIYTKPFGKSVCRIPYESRLAR FT KLLGKKLLVIGLASWPPMTPEDIEREFRLVLSSPADGVGFYSYGWTPDGNLLTIERLFR FT EVGT" FT gene 371470..372267 FT /locus_tag="TGAM_0388" FT /note="tg0388" FT CDS 371470..372267 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0388" FT /product="Xylose isomerase, putative" FT /note="May be also related to family 2 AP endonucleases" FT /db_xref="GOA:C5A3S8" FT /db_xref="InterPro:IPR012307" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/TrEMBL:C5A3S8" FT /inference="protein motif:CDD:AP_endonuc_2, AP endonuclease FT family 2" FT /inference="protein motif:CDD:IolE, Sugar phosphate FT isomerases/epimerases [Carbohydrate transport and FT metabolism]" FT /inference="protein motif:COG:COG1082 Sugar phosphate FT isomerases/epimerases; G Carbohydrate transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.20.150 no FT description" FT /inference="protein motif:HMMPfam:PF01261 AP_endonuc_2 FT InterPro:IPR012307 Xylose isomerase-like TIM barrel" FT /inference="protein motif:superfamily:SSF51658 Xylose FT isomerase-like" FT /protein_id="ACS32890.1" FT /translation="MKFGINCWSFPKTLPVEEAVKAAGRIGYEGYEVGLSIEDFEAFGK FT PEFKEKFRKIREVAESCKVEIPSVATGLFWRFNPLTDQEKALKVVEAECEAASELGARL FT ILVVPGSGVPELSYEEHFKRAAEFGRKASEIAEDYGIKIGLENVWNRVFAGPLEFKRLL FT DEIEEDNVGAYFDAGNTLPHSLPEHWIDVLGDKIFQVHVKDFNLVELKFGIPLSGSVNW FT TAVREALERIGYDGYVLPEVPPYLGDPLKAAEDSLTSLRKIFG" FT gene 372264..373232 FT /locus_tag="TGAM_0389" FT /note="tg0389" FT CDS 372264..373232 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0389" FT /product="Glucose-fructose oxidoreductase, putative" FT /db_xref="GOA:C5A3S9" FT /db_xref="InterPro:IPR000683" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A3S9" FT /inference="protein motif:CDD:GFO_IDH_MocA, Oxidoreductase FT family, NAD-binding Rossmann fold" FT /inference="protein motif:CDD:MviM, Predicted FT dehydrogenases and related proteins [General function FT prediction only]" FT /inference="protein motif:COG:COG0673 Predicted FT dehydrogenases and related proteins; R General function FT prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPanther:PTHR11732 ALDO/KETO FT REDUCTASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11732:SF30 FT NADH-DEPENDENT DEHYDROGENASE-RELATED" FT /inference="protein motif:HMMPfam:PF01408 GFO_IDH_MocA FT InterPro:IPR000683 Oxidoreductase, N-terminal GO:Biological FT Process:electron transport (GO:0006118), Biological FT Process:metabolism (GO:0008152), Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:HMMPfam:PF02894 GFO_IDH_MocA_C FT InterPro:IPR004104 Oxidoreductase, C-terminal GO:Biological FT Process:electron transport (GO:0006118), Biological FT Process:metabolism (GO:0008152), Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:ScanRegExp:PS00037 MYB_1 FT InterPro:IPR001005 Myb, DNA-binding GO:Molecular FT Function:DNA binding (GO:0003677), Cellular FT Component:nucleus (GO:0005634)" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /protein_id="ACS32891.1" FT /translation="MMGMRIALIGAGNMGSLHLKVMKMAGVEIAGVCDVKDEVLRKVKE FT EYGVPVYKDYQEMLEKESPDGVIIATPPHLHREQAIYALKKGYYVLLEKPMGANLQDAR FT AIYRRARGTNRLMVAFSLRFHGLFMKVKDYLERDLGDILFQWHVALGRTPVNEWIKDSR FT KSGGMINENAVHVVYYFLWYAGDIKKVYGRCWTLEEDATIEDNAAVTFVHRNGAVSTLM FT QTWTAQHRWRKWGLQATNGTVTVDGYLGGDYKISTREMRVLEEGNFSEEVELMYLRQLK FT HFLHCIETGEKPVVNEEDGLKVHRAVQALYRSSRLDRMVPL" FT gene 373329..373865 FT /locus_tag="TGAM_0390" FT /note="tg0390" FT CDS 373329..373865 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0390" FT /product="Transcription regulator, putative" FT /db_xref="GOA:C5A3T0" FT /db_xref="InterPro:IPR000485" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR019887" FT /db_xref="UniProtKB/TrEMBL:C5A3T0" FT /inference="protein motif:CDD:Lrp, Transcriptional FT regulators [Transcription]" FT /inference="protein motif:COG:COG1522 Transcriptional FT regulators; K Transcription" FT /inference="protein motif:FPrintScan:PR00033 HTHASNC FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMSmart:SM00344 no description FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:ProfileScan:PS50956 HTH_ASNC_2 FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /inference="protein motif:superfamily:SSF54909 Dimeric FT alpha+beta barrel InterPro:IPR011008 Dimeric alpha-beta FT barrel" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32892.1" FT /translation="MPDSKDAKYKKELEFYRDILKDYLDEVDLLIWLALRDNGRISDTE FT LAKIANVSVPTARRRRMALEEKGIIRVRGFLVFDRLKLSSADVLVKFRPGFSKETVRDF FT IARALDEPRIYEISEYIGEYDVLLRFFEKDYKTLKEKIEEFLTENGDIVERYTVLANIY FT TPKIFSELVDENREE" FT gene complement(373869..375014) FT /gene="nagA" FT /locus_tag="TGAM_0391" FT /note="tg0391" FT CDS complement(373869..375014) FT /codon_start=1 FT /transl_table=11 FT /gene="nagA" FT /locus_tag="TGAM_0391" FT /product="N-acetylglucosamine-6-phosphate deacetylase FT (nagA)" FT /EC_number="3.5.1.25" FT /db_xref="GOA:C5A3T1" FT /db_xref="InterPro:IPR003764" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="UniProtKB/TrEMBL:C5A3T1" FT /inference="protein motif:BlastProDom:PD001248 FT Q929R1_LISIN_Q929R1; InterPro:IPR011550 FT Amidohydrolase-like" FT /inference="protein motif:CDD:AdeC, Adenine deaminase FT (AdeC) directly deaminates adenine to form hypoxanthine" FT /inference="protein motif:CDD:AdeC, Adenine deaminase FT [Nucleotide transport and metabolism]" FT /inference="protein motif:CDD:Amidohydro_1, Amidohydrolase FT family" FT /inference="protein motif:CDD:COG3964, Predicted FT amidohydrolase [General function prediction only]" FT /inference="protein motif:CDD:HutI, Imidazolonepropionase FT and related amidohydrolases [Secondary metabolites FT biosynthesis, transport, and catabolism]" FT /inference="protein motif:CDD:NagA, FT N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:CDD:NagA, FT N-acetylglucosamine-6-phosphate deacetylase, NagA, FT catalyzes the hydrolysis of the N-acetyl group of FT N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to FT glucosamine 6-phosphate and acetate" FT /inference="protein motif:CDD:SsnA, Cytosine deaminase and FT related metal-dependent hydrolases [Nucleotide transport FT and metabolism / General function prediction only]" FT /inference="protein motif:COG:COG1820 FT N-acetylglucosamine-6-phosphate deacetylase; G Carbohydrate FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.2.30.40.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11113 FT N-ACETYLGLUCOSAMINE-6-PHOSPHATE DEACETYLASE-RELATED" FT /inference="protein motif:HMMPfam:PF01979 Amidohydro_1 FT InterPro:IPR006680 Amidohydrolase 1 GO:Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:HMMTigr:TIGR00221 FT nagA:N-acetylglucosamine-6-phosphate deacet FT InterPro:IPR003764 N-acetylglucosamine-6-phosphate FT deacetylase GO:Biological Process:N-acetylglucosamine FT metabolism (GO:0006044), Molecular FT Function:N-acetylglucosamine-6-phosphate deacetylase FT activity (GO:0008448)" FT /inference="protein motif:superfamily:SSF51338 Composite FT domain of metallo-dependent hydrolases InterPro:IPR011059 FT Metallo-dependent hydrolase, composite" FT /protein_id="ACS32893.1" FT /translation="MRTVLTNARLYTPFDIVEPATVVIENGRVKKVYEGREENGIDLEG FT KILAPGFVDTHIHGCCGYDTNDGTAESLLRMSESLVRYGVTSFIPTTVTASHEELLRAS FT RAVAEAMKAQERELRGARILGLHLEGPYINVEAKGAQNPAFIRKSDFEEFLEYWRASEG FT NIREITVAPEVEGALEFIERVTELGVIVQIGHTRATYEETKRGILAGARKATHLFNAMR FT GFHHREPGTVGACLESEGVYLELICDLIHVSPTAIRLVYRLAGPERVVLITDAISATGL FT PDGRYELGGLKVVVKDGVCRLEDGTLAGSTLTLDRAIRNLVKIGIPLRDALIMATATPA FT RALGREDIGIIRPGSRADFVVLNEKLEVEETYVAGRRVFEG" FT gene complement(375025..375765) FT /locus_tag="TGAM_0392" FT /note="tg0392" FT CDS complement(375025..375765) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0392" FT /product="Phosphoheptose isomerase, putative" FT /note="Contains 1 SIS (Sugar ISomerase) phosphosugar FT binding domain" FT /db_xref="GOA:C5A3T2" FT /db_xref="InterPro:IPR001347" FT /db_xref="UniProtKB/TrEMBL:C5A3T2" FT /inference="protein motif:CDD:COG4821, Uncharacterized FT protein containing SIS (Sugar ISomerase) phosphosugar FT binding domain [General function prediction only]" FT /inference="protein motif:CDD:GmhA, Phosphoheptose FT isomerase [Carbohydrate transport and metabolism]" FT /inference="protein motif:COG:COG4821 Uncharacterized FT protein containing SIS (Sugar ISomerase) phosphosugar FT binding domain; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.1940 no FT description" FT /inference="protein motif:superfamily:SSF53697 SIS domain" FT /protein_id="ACS32894.1" FT /translation="MMEMIEKYYSAVLEILERIKREEKENIERAAGLLKETLKSGGIVH FT VVGAGHSAMLGEELFYRAGGLAPVNPILDTDINVSHGAEKSTAMEDVKGYAEVLLRTAG FT VREGDIVIVVSTSGVNQFPVEAAVFARELGAKTVGITSVNYSRTLQPRNTYGKRLFEVV FT DVPIDNKVPRGDAVLEVEGFPMKVAPVSTIANCFIANSMVALAVQELVREGVTPPVWLS FT AHLPEAKEHNSKLFEKYRGRIKLL" FT gene complement(375762..376697) FT /locus_tag="TGAM_0393" FT /note="tg0393" FT CDS complement(375762..376697) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0393" FT /product="Acetyltransferase, GNAT family" FT /db_xref="GOA:C5A3T3" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:C5A3T3" FT /inference="protein motif:CDD:Eis, Predicted FT acetyltransferase involved in intracellular survival and FT related acetyltransferases [General function prediction FT only]" FT /inference="protein motif:COG:COG4552 Predicted FT acetyltransferase involved in intracellular survival and FT related acetyltransferases; R General function prediction FT only" FT /inference="protein motif:Gene3D:G3D.3.40.630.30 no FT description" FT /inference="protein motif:HMMPfam:PF00583 Acetyltransf_1 FT InterPro:IPR000182 GCN5-related N-acetyltransferase FT GO:Molecular Function:N-acetyltransferase activity FT (GO:0008080)" FT /inference="protein motif:superfamily:SSF55729 Acyl-CoA FT N-acyltransferases (Nat)" FT /protein_id="ACS32895.1" FT /translation="MIRTAGEEDIPGIVKLMNECFRTYRSWGLNEEKFREWLRSDPGVS FT LDGTYLHIEGDKIAAMVQVVEREIKVEREFFRTAGIANVCTGPEFRGRGLARELLEHAL FT VDSLERGYELSALLAGYGEIAHSLYRKLGFRDVYFTRYGIMVQDELKKLPEAEGVRYAT FT EEDAEGMLKLYERRIRELDGVVKRNLDYFIEKLIRRTFWHTFFYSEEKGALVFDDGKIR FT GYALVMRGTLPGQGIVREILFDDSETAYSLLSASASVLRAKSLKIFAPEDELELLGVET FT FKEPEVYMFKPLRGELPPMEKPYIFYSDRW" FT gene complement(376702..377874) FT /locus_tag="TGAM_0394" FT /note="tg0394" FT CDS complement(376702..377874) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0394" FT /product="Zinc carboxypeptidase, M14 family, putative FT carboxypeptidase A" FT /db_xref="GOA:C5A3T4" FT /db_xref="InterPro:IPR000834" FT /db_xref="UniProtKB/TrEMBL:C5A3T4" FT /inference="protein motif:CDD:Zn_carbOpept, Zinc FT carboxypeptidase" FT /inference="protein motif:CDD:Zn_pept, Zn_pept domain" FT /inference="protein motif:COG:COG2866 Predicted FT carboxypeptidase; E Amino acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.630.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11532 FT CARBOXYPEPTIDASE-RELATED" FT /inference="protein motif:HMMPfam:PF00246 Peptidase_M14 FT InterPro:IPR000834 Peptidase M14, carboxypeptidase A FT GO:Molecular Function:carboxypeptidase A activity FT (GO:0004182), Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:superfamily:SSF53187 Zn-dependent FT exopeptidases" FT /protein_id="ACS32896.1" FT /translation="MRAMVNPLFRLIPYEEVSRAVETSGWEYEVVGKSASGRNLYHVKM FT GKGKVRLLIVAGIHGTEPAPVNASVVLLNLLKERYPLGYNFERLKNVEVHLIPLANPDG FT FQLNYELFKKKDFEPHWSHVWEEARRNANGVDLNRDWMRLSQPETRAIHRVINEVDPHL FT VLDLHEFYARGGCPPKWADETEGFLSTLTDTPYNWVNEAIRLVSEKVAKEIARSLPWKP FT KMRHFMAEAHEFPIVPNNVLGSHVPFEGSAKVLVESWGTGLGNYLLPDRVGIHLNAILT FT AIEFMEENPERFIEMKKEWRREETKVGREYREFRVSGRELERAKEVLSLHGIEFEERED FT ELIVKMPQGRSRIAILLLDREHWYNQELRKRWKGPHTLDKFFDVNVEAVR" FT gene 377966..379216 FT /locus_tag="TGAM_0395" FT /note="tg0395" FT CDS 377966..379216 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0395" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR006823" FT /db_xref="UniProtKB/TrEMBL:C5A3T5" FT /inference="protein motif:ScanRegExp:PS00430 FT TONB_DEPENDENT_REC_1 InterPro:IPR010916 TonB box, FT N-terminal" FT /protein_id="ACS32897.1" FT /translation="MVAMLVASGKVEITPEKPMPMAGYALRKGRSVGTLDPLYAKALYL FT EEERPAVIISLDLVRVDNELYREIARKVSEILDLPKESVLVSATHTHSGPEVSTSFWNS FT VGLDENEVKLVEEYRNFLVERIGALVESLQPKSGELYAGSAEVRGVSSNRVSEDGPLDR FT ECVFLFSEREAIALNFACHPTVLPAENRKFSGDLAGAIARLFESKFRTAMFLNGAAGNV FT STRFTRRAQTPDEVLRLARLFYEQVAPSFGRAHRVSGAINVEWRNLKLKLREFPPVETV FT EKLERDALRRWKESVNAPLPVRRMLESNYLGVKILKRRLSLLESIESIDFRIAKMSIGR FT DLVALFVPAELFVEYQIAVKEASTYRYTMLVGYSNGYWGYVPYGETGDSTYEMAVSLVH FT PDEYDRILETLVELVKK" FT gene complement(379240..381969) FT /locus_tag="TGAM_0396" FT /note="tg0396" FT CDS complement(379240..381969) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0396" FT /product="Glycosyl hydrolase, putative" FT /note="Belongs to DUF187 family; 1 probable transmembrane FT helix predicted by modhmm" FT /db_xref="GOA:C5A3T6" FT /db_xref="InterPro:IPR003790" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/TrEMBL:C5A3T6" FT /inference="protein motif:Gene3D:G3D.3.20.20.80 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.880 no FT description" FT /inference="protein motif:HMMPanther:PTHR12835 BIOTIN FT PROTEIN LIGASE" FT /inference="protein motif:HMMPanther:PTHR12835:SF5 gb FT def:putative biotin-protein ligase [schizosaccharomyces FT pombe]" FT /inference="protein motif:HMMPfam:PF02638 DUF187 FT InterPro:IPR003790 Protein of unknown function DUF187" FT /inference="protein motif:superfamily:SSF51445 FT (Trans)glycosidases" FT /inference="protein motif:superfamily:SSF51905" FT /inference="protein motif:superfamily:SSF52317 Class I FT glutamine amidotransferase-like" FT /protein_id="ACS32898.1" FT /translation="MARKPLVLALVFLVVMSLVAMPSATFAKVEQKKIDQNVVSGVWMW FT PSTYKAYYQEALEELGYSNPFDEKVYPTIPEDVKEKALKTAAERLVSELKEAGITDVFI FT EVKLTLGYVIYPSKVYPERTYPAYPYNTTNILKPLLEEAHRNGIRVHAWMIVHYDKYFF FT GKTDPIWHVGKASKNWEAYPVPGRVRLSNKEYLKVLENIAKELISMGFDGIHLDYIRYP FT HMVYSFSPKDLERAEEAGINVTKVTLAVEHTFYNDVPIPGTNKTMGPKDPYYIFKLYVK FT GDKDIVKWFELRRKDVDSYVGNITQVVHSLKTWNGEKPIVSAALMPDWTRDNILYPEEF FT QIMHYAQVWSDFVKLGVDWLIPMAYFKDYGEPISWVGVVKGHLVGITGTKSVPLVGVQS FT YGIPMEKVLEEKDFALSEFPEKAIYLVALPADKPRNDRTANKVIDLLAFINKELYAGDF FT TGYMITEDLEVKGITAPKGSLILIGERYELENLKKTAARAGINVVPLERLPSVRAIPLM FT PPKIALLDVGYNYTINDVLKELGFKYDIVSNGSIKQGILNKYDLLILPPGSGTWEAKLL FT GEEGAEKLAEFLAGGGGLIGVCAGGYAVIKGYNEPTSKVQLVDAELKNWPKWWLGVGIV FT HVKVTNENNPVVFGFRDGFDAIYWNGPVFKPFDLKNDTPLGIDVEPYVELVKYVSPAEE FT GAFSYGWGDFNRTFVESVMRDSSAVIYSKYGHGNVVLFGFHPELTSGDLEYAPKSILSS FT KYNYRLWFNAIYFVSRKGREISLEPAKGVVYFRWWNVKLRLDSPDVTLSISGVRNLHFF FT GRTKVRLILLKVKNYGNTDAVGVTVTVNVRVKGVRGRKGTLTFHLRTLKKKQSVLIPVL FT VLSTGKTEVTIDAKVSAKNEPKLNWANNELHKTFEFLS" FT gene 382481..383749 FT /locus_tag="TGAM_0397" FT /note="tg0397" FT CDS 382481..383749 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0397" FT /product="Putative transporter" FT /note="Belongs to DUF819 family; 12 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR008537" FT /db_xref="UniProtKB/TrEMBL:C5A3T7" FT /inference="protein motif:CDD:DUF819, Protein of unknown FT function (DUF819)" FT /inference="protein motif:COG:COG5505 Predicted integral FT membrane protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF05684 DUF819 FT InterPro:IPR008537 Protein of unknown function DUF819" FT /protein_id="ACS32899.1" FT /translation="MKKAGPFTWALILAILSTNCYIIPRTIYLDFVTKASSAGLAKPIV FT ANLTKAGIKYVAVTKKALSLQKILVEIGIPLSITFLLLEIDLKAIKKSIGGRPFAIFFI FT GSLGTVIAGFIGAILVAVIFHDPTTKAEALKAIAAKIAAWIGGSENSAAVGVSALKMSG FT DFYSYYTLAGVIPYALYITIMFSIGGSEEFVNRINRFIKPTYNAKVIAEQYRAEVGEKK FT LPPKLRERDLFIIGMSALIIVMLAFAFESWFGSYRVFGLKVGSLLPTVIVATTIALIVG FT AYTKVRNLPLLRPIGMYFLYLTIFVYIAQKTDFAKLAGAAHVVLILMAVFFIMLAIHFI FT VILLGAKLIKVDWATTAIASVANIGGGVTAPLCATAYGVEELVPLGVIMASIGYAIANY FT VGYYVGLLFLKLWAPGALSALGL" FT gene 383780..385018 FT /gene="dapE" FT /locus_tag="TGAM_0398" FT /note="tg0398" FT CDS 383780..385018 FT /codon_start=1 FT /transl_table=11 FT /gene="dapE" FT /locus_tag="TGAM_0398" FT /product="Succinyl-diaminopimelate desuccinylase (dapE)" FT /EC_number="3.5.1.18" FT /note="Maybe also related to acetylornithine deacetylase FT (EC 3.5.1.16)" FT /db_xref="GOA:C5A3T8" FT /db_xref="InterPro:IPR001261" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR010182" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:C5A3T8" FT /inference="protein motif:CDD:ArgE, Acetylornithine FT deacetylase/Succinyl-diaminopimelate desuccinylase and FT related deacylases [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PepD, Di- and tripeptidases FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:Peptidase_M20, Peptidase FT family M20/M25/M40" FT /inference="protein motif:COG:COG0624 Acetylornithine FT deacetylase/Succinyl-diaminopimelate desuccinylase and FT related deacylases; E Amino acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.630.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11014 FT ARGE/DAPE/ACY1 FAMILY PROTEIN" FT /inference="protein motif:HMMPanther:PTHR11014:SF8 FT SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE-RELATED" FT /inference="protein motif:HMMPfam:PF01546 Peptidase_M20 FT InterPro:IPR002933 Peptidase M20 GO:Biological FT Process:proteolysis (GO:0006508), Molecular FT Function:metallopeptidase activity (GO:0008237)" FT /inference="protein motif:HMMPfam:PF07687 M20_dimer FT InterPro:IPR011650 Peptidase dimerisation GO:Molecular FT Function:hydrolase activity (GO:0016787), Molecular FT Function:protein dimerization activity (GO:0046983)" FT /inference="protein motif:HMMTigr:TIGR01910 FT DapE-ArgE:acetylornithine deacetylase or s FT InterPro:IPR010182 Acetylornithine deacetylase or FT succinyl-diaminopimelate desuccinylase GO:Molecular FT Function:succinyl-diaminopimelate desuccinylase activity FT (GO:0009014), Biological Process:lysine biosynthesis FT (GO:0009085), Molecular Function:metal ion binding FT (GO:0046872)" FT /inference="protein motif:ScanRegExp:PS00759 FT ARGE_DAPE_CPG2_2 InterPro:IPR001261 FT ArgE/dapE/ACY1/CPG2/yscS GO:Biological Process:proteolysis FT (GO:0006508), Molecular Function:metallopeptidase activity FT (GO:0008237)" FT /inference="protein motif:superfamily:SSF53187 Zn-dependent FT exopeptidases" FT /protein_id="ACS32900.1" FT /translation="MMKMEEYLNYALEMLFELVRIPTVNPPGENYERAAKLLKDKLEEM FT GFEVELIEVPEDYLDRTYPYSPRHRGKPRFIVYGSLGKGKTLHFNGHYDVVPPGDGWRH FT DPFTPTVEGDRIYGRGTTDMKGGIATALAALKYAVEHDMINYRVEVAFVPDEESGGMGT FT RYLMEEVGIRPDYVVIPEPTSHRLIGIGHKGFARGVVKVIGKQGHASRPWKAVNAFEKA FT CELVVDFLPRYWEVLRGRKTEFPVEDENSAHPSIALGGYAESPTKKDNIIPGEFYFSFD FT RRIIPEENATEVVEELERFLRESASKAGVGVEVDVKSLIEASATPLDSPIVKLAQKAVK FT NALGIEPTLMLNAGRYDLVYYRRFGVEGIAYGPGVRGQAHAIDEYTTVGEIESVLKAYM FT ELLRLFGGGGDGD" FT gene 385008..386315 FT /gene="maeB" FT /locus_tag="TGAM_0399" FT /note="tg0399" FT CDS 385008..386315 FT /codon_start=1 FT /transl_table=11 FT /gene="maeB" FT /locus_tag="TGAM_0399" FT /product="Malic enzyme (malate oxidoreductase) (maeB)" FT /EC_number="1.1.1.40" FT /db_xref="GOA:C5A3T9" FT /db_xref="InterPro:IPR001891" FT /db_xref="InterPro:IPR012301" FT /db_xref="InterPro:IPR012302" FT /db_xref="InterPro:IPR015884" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A3T9" FT /inference="protein motif:CDD:malic, Malic enzyme, FT N-terminal domain" FT /inference="protein motif:CDD:Malic_M, Malic enzyme, NAD FT binding domain" FT /inference="protein motif:CDD:SfcA, Malic enzyme [Energy FT production and conversion]" FT /inference="protein motif:COG:COG0281 Malic enzyme; C FT Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPanther:PTHR10893 MALIC ENZYME FT InterPro:IPR001891 Malic oxidoreductase GO:Molecular FT Function:malic enzyme activity (GO:0004470), Biological FT Process:malate metabolism (GO:0006108)" FT /inference="protein motif:HMMPfam:PF00390 malic FT InterPro:IPR012301 Malic enzyme, N-terminal GO:Molecular FT Function:oxidoreductase activity, acting on the CH-OH group FT of donors, NAD or NADP as acceptor (GO:0016616)" FT /inference="protein motif:HMMPfam:PF03949 Malic_M FT InterPro:IPR012302 Malic enzyme, NAD-binding GO:Molecular FT Function:oxidoreductase activity, acting on the CH-OH group FT of donors, NAD or NADP as acceptor (GO:0016616), Molecular FT Function:NAD binding (GO:0051287)" FT /inference="protein motif:HMMPIR:PIRSF000106 Malic enzyme FT InterPro:IPR001891 Malic oxidoreductase GO:Molecular FT Function:malic enzyme activity (GO:0004470), Biological FT Process:malate metabolism (GO:0006108)" FT /inference="protein motif:ProfileScan:PS50204 UBA_NAD FT InterPro:IPR000594 UBA/THIF-type NAD/FAD binding fold FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:ProfileScan:PS50205 NAD_BINDING FT InterPro:IPR000205 NAD-binding site" FT /inference="protein motif:ScanRegExp:PS00331 MALIC_ENZYMES FT InterPro:IPR001891 Malic oxidoreductase GO:Molecular FT Function:malic enzyme activity (GO:0004470), Biological FT Process:malate metabolism (GO:0006108)" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /inference="protein motif:superfamily:SSF53223 Aminoacid FT dehydrogenase-like, N-terminal domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32901.1" FT /translation="MGTKLTEEQVKRMKEDALLYHRNNFPGNGKIEVIPKVRLKDFYDL FT SLAYTPGVAEVCRAILRGESVDDYTVIPNTVAVVTDGSAILGLGDIGVLAGMPVMEGKC FT VLFKALAGVDAFPVLINTKDVDEIVRTVRLISKGFGGINLEDISAPRCFEIEERLKREL FT DIPVFHDDQHGTAVVTLAGLINALKIVGKRFEDIKVVISGAGAAGIAIAKVLHHVGVRE FT ILVVDRAGIIYEGRKENMNPYKEEVAKFNIHNVQGDLAKAMEGADVFIGVSVGGIVSKD FT MVRKMADDAIVFALANPVPEIMPDEAKEAGARIVATGRSDFPNQINNVLGFPGIFRGAL FT DVRARDITLDMNIAAAKAIASCVSDEELSEDYIIPTPFHPDVYPKEARAVAEQAVKDGV FT ARKKVSGEWVEEHTRKLRRFYEEVIAPVNEKRKNFS" FT gene 386460..386924 FT /locus_tag="TGAM_0400" FT /note="tg0400" FT CDS 386460..386924 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0400" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3U0" FT /protein_id="ACS32902.1" FT /translation="MLGFLRRKKTYGPFVYLSEPTFLYHTRTEKAILKIIEEKLNSNNI FT LVPSKYGLRDTSDRIRDAEYFVAVAPLGKFTSLVGREVKLAQELGVKIFTLLIARKGDE FT LVYLWVEGVPEDVEWLSPEETMEFTKTFINSEFMDFLKHGLFFGSRKREW" FT gene complement(386932..388347) FT /gene="gltA-1" FT /locus_tag="TGAM_0401" FT /note="tg0401" FT CDS complement(386932..388347) FT /codon_start=1 FT /transl_table=11 FT /gene="gltA-1" FT /locus_tag="TGAM_0401" FT /product="Glutamate synthase (NADPH), homotetrameric FT (gltA)" FT /EC_number="1.4.1.13" FT /db_xref="GOA:C5A3U1" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR006004" FT /db_xref="InterPro:IPR009051" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR023753" FT /db_xref="UniProtKB/TrEMBL:C5A3U1" FT /inference="protein motif:CDD:AhpF, Alkyl hydroperoxide FT reductase, large subunit [Posttranslational modification, FT protein turnover, chaperones]" FT /inference="protein motif:CDD:GltD, NADPH-dependent FT glutamate synthase beta chain and related oxidoreductases FT [Amino acid transport and metabolism / General function FT prediction only]" FT /inference="protein motif:CDD:HcaD, Uncharacterized FT NAD(FAD)-dependent dehydrogenases [General function FT prediction only]" FT /inference="protein motif:CDD:Lpd, Pyruvate/2-oxoglutarate FT dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) FT component, and related enzymes [Energy production and FT conversion]" FT /inference="protein motif:CDD:NirB, NAD(P)H-nitrite FT reductase [Energy production and conversion]" FT /inference="protein motif:CDD:Pyr_redox, Pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:CDD:TrkA, Predicted flavoprotein FT involved in K+ transport [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:TrxB, Thioredoxin reductase FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:COG:COG0493 NADPH-dependent FT glutamate synthase beta chain and related oxidoreductases; FT E Amino acid transport and metabolism" FT /inference="protein motif:FPrintScan:PR00368 FADPNR FT InterPro:IPR013027 FAD-dependent pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:FPrintScan:PR00411 PNDRDTASEI FT InterPro:IPR001100 Pyridine nucleotide-disulphide FT oxidoreductase, class I GO:Biological Process:electron FT transport (GO:0006118), Molecular Function:oxidoreductase FT activity (GO:0016491)" FT /inference="protein motif:FPrintScan:PR00419 ADXRDTASE FT InterPro:IPR000759 Adrenodoxin reductase GO:Biological FT Process:electron transport (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:Gene3D:G3D.3.50.50.60 no FT description" FT /inference="protein motif:HMMPanther:PTHR11938 GLUTAMATE FT SYNTHASE/FERREDOXIN/FERREDOXIN--NADP REDUCTASE" FT /inference="protein motif:HMMPanther:PTHR11938:SF9 FT GLUTAMATE SYNTHASE" FT /inference="protein motif:HMMPfam:PF07992 Pyr_redox_2 FT InterPro:IPR013027 FAD-dependent pyridine FT nucleotide-disulphide oxidoreductase" FT /inference="protein motif:HMMTigr:TIGR01316 gltA:glutamate FT synthase (NADPH), homotetram InterPro:IPR006004 Glutamate FT synthase (NADPH), homotetrameric" FT /inference="protein motif:ProfileScan:PS50205 NAD_BINDING FT InterPro:IPR000205 NAD-binding site" FT /inference="protein motif:superfamily:SSF46548 FT alpha-helical ferredoxin InterPro:IPR009051 Alpha-helical FT ferredoxin" FT /inference="protein motif:superfamily:SSF51971 FT Nucleotide-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32903.1" FT /translation="MPKLIKERVPTPERPVEERVKDFGEVNLGYTFELAVKEAERCLQC FT PENYAPCIKGCPVHINIPAFIAKIKEGDIKGALRIIWNDNTLPAITGRVCPQEDQCEGA FT CVVGKVGDAVNIGKLERFVADYARKHGIEEELLCEFEEKCTGERGKVAVVGAGPAGLTC FT AGELAKMGYKVTIFEALHKPGGVLIYGIPEFRLPKEILDHELAKLKRLGVEIKTDHVVG FT RTVTIEELLKEYDAVFIGTGAGTPKLLNIPGILLDRIYSANEFLTRINLMKAYEFPEYD FT TPIAVGKKVIVIGAGNTAMDAARSALRLGCDVTIAYRRGEEDVTARIEEVEHAKEEGVK FT FLYFVQPVEFIGDENGKVKAVKFEKMEPLEERDRRGKRKIRPTGEYITVEADTVIIAIG FT LEPNRIISEESGLKTNPNGTLVVDENLMTSIPGVFAGGDAIRGEATVILAMGDGKRAAK FT AIDEYVRAKKASA" FT gene complement(388348..389199) FT /locus_tag="TGAM_0402" FT /note="tg0402" FT CDS complement(388348..389199) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0402" FT /product="Cytochrome-c3 hydrogenase, gamma subunit" FT /db_xref="GOA:C5A3U2" FT /db_xref="InterPro:IPR012165" FT /db_xref="InterPro:IPR017938" FT /db_xref="InterPro:IPR019480" FT /db_xref="UniProtKB/TrEMBL:C5A3U2" FT /inference="protein motif:CDD:UbiB, 2-polyprenylphenol FT hydroxylase and related flavodoxin oxidoreductases FT [Coenzyme metabolism / Energy production and conversion]" FT /inference="protein motif:COG:COG0298 Hydrogenase FT maturation factor; O Posttranslational modification, FT protein turnover, chaperones" FT /inference="protein motif:Gene3D:G3D.2.10.240.10 no FT description" FT /inference="protein motif:Gene3D:G3D.2.40.30.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.80 no FT description" FT /inference="protein motif:HMMPIR:PIRSF006816 Cytochrome-c3 FT hydrogenase, gamma subunit InterPro:IPR012165 Cytochrome-c3 FT hydrogenase, gamma subunit GO:Molecular Function:iron ion FT binding (GO:0005506), Biological Process:electron transport FT (GO:0006118), Biological Process:pyrimidine nucleotide FT biosynthesis (GO:0006221), Molecular Function:FAD binding FT (GO:0050660)" FT /inference="protein motif:superfamily:SSF52343 Ferredoxin FT reductase-like, C-terminal NADP-linked domain" FT /inference="protein motif:superfamily:SSF63380 Riboflavin FT synthase domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32904.1" FT /translation="MGYRITAKEDLSPIDYFVEVEAPHVARAWKPGQFVVFILHERGER FT VPMSVYKAENGRVGMFIRKLGKTSMQLYYEYKPGDELWSFVGPLGKPIKIKNYGSVAFV FT SDAVCGQAENYATLKAMREAGNYTISVQTFEDRERVYPEKFLAREVADEYYLTTLDGSV FT GLKGHYLDVVKELIEKDKVDVIFAGGKLGSLAKLAELTRPYGIPTYATVRQIMVDGTGM FT CGSCRVLYDSEVKFACRDGPVFDAHKIDWEDAIRRNAERFAEQERLAKERYLEYLRAKG FT VI" FT gene 389363..390175 FT /locus_tag="TGAM_0403" FT /note="tg0403" FT CDS 389363..390175 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0403" FT /product="Conserved hypothetical protein" FT /note="Contains DUF137 domain" FT /db_xref="InterPro:IPR002855" FT /db_xref="UniProtKB/TrEMBL:C5A3U3" FT /inference="protein motif:BlastProDom:PD016827 FT Q9V0U5_PYRAB_Q9V0U5; InterPro:IPR002855 Protein of unknown FT function DUF137" FT /inference="protein motif:CDD:COG1701, Uncharacterized FT protein conserved in archaea [Function unknown]" FT /inference="protein motif:CDD:DUF137, Protein of unknown FT function DUF137" FT /inference="protein motif:COG:COG1701 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF02006 DUF137 FT InterPro:IPR002855 Protein of unknown function DUF137" FT /inference="protein motif:HMMPIR:PIRSF004853 FT Uncharacterised conserved protein InterPro:IPR002855 FT Protein of unknown function DUF137" FT /inference="protein motif:superfamily:SSF52467 DHS-like FT NAD/FAD-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32905.1" FT /translation="MGETPSVVRMVKIPKSHPRYWSLYYREKIIEGMEKGMTAKAGLIA FT HGRGEAFDYLIGEKTIEPAERAMMAAVAKFLLAKHPVISVNGNVAALVPKETIELAKAL FT NAKLEINLFYRTEERVRAIERELRKYDPNIEILGINPTKRIPGLEHERGKADENGIWKA FT DVVLVPLEDGDRTEALVRMGKFVVTVDLNPLSRSARMADITIVDNIVRAYPRMIELAEE FT MRNLPREELERIVNSYDNGKTLSDVLLHIRNRLTKLAEEGIWRRKRLD" FT gene complement(390172..390903) FT /locus_tag="TGAM_0404" FT /note="tg0404" FT CDS complement(390172..390903) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0404" FT /product="HTH-type transcriptional regulator, putative" FT /db_xref="GOA:C5A3U4" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR010982" FT /db_xref="InterPro:IPR017271" FT /db_xref="UniProtKB/TrEMBL:C5A3U4" FT /inference="protein motif:CDD:COG1709, Predicted FT transcriptional regulator [Transcription]" FT /inference="protein motif:COG:COG1709 Predicted FT transcriptional regulator; K Transcription" FT /inference="protein motif:HMMPfam:PF01381 HTH_3 FT InterPro:IPR001387 Helix-turn-helix type 3 GO:Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:HMMSmart:SM00530 no description FT InterPro:IPR001387 Helix-turn-helix type 3 GO:Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:ProfileScan:PS50943 HTH_CROC1 FT InterPro:IPR001387 Helix-turn-helix type 3 GO:Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:superfamily:SSF47413 lambda FT repressor-like DNA-binding domains InterPro:IPR010982 FT Lambda repressor-like, DNA-binding" FT /inference="protein motif:superfamily:SSF75138 HPr FT kinase/phoshatase HprK N-terminal domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32906.1" FT /translation="MLEKEKEALARRIAGEIALSSDPGKTMRKWREIFGISQTELAEHL FT GVSSSVISDYEGGRRKSPGAATIKKFVEALLEIDEKRGGNVIKAFSRTIGVELPTSAIL FT DIREFAIPVTIAELVEAVKGEVMTRKDELERRIYGYTVVDSIKAILEMSSEEFLKLYGW FT TTERALVFTKVSTGRSPMIAVRVQGLKPAVVVVHGVKKLDELAVRLAEKEKIPLVVSHA FT ENENELISGLRALVEKSERTA" FT gene complement(391152..391229) FT /locus_tag="TGAM_r011" FT /note="tg_tRNA-Ile" FT tRNA complement(391152..391229) FT /locus_tag="TGAM_r011" FT /product="tRNA-Ile" FT /note="codon recognized: AUC" FT gene complement(391240..391317) FT /locus_tag="TGAM_r012" FT /note="tg_tRNA-Glu1" FT tRNA complement(391240..391317) FT /locus_tag="TGAM_r012" FT /product="tRNA-Glu" FT /note="codon recognized: GAG" FT gene complement(391346..392488) FT /locus_tag="TGAM_0405" FT /note="tg0405" FT CDS complement(391346..392488) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0405" FT /product="Permease, putative, MatE related" FT /note="Contains 12 transmembrane regions; 12 probable FT transmembrane helices predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3U5" FT /inference="protein motif:COG:COG2244 Membrane protein FT involved in the export of O-antigen and teichoic acid; R FT General function prediction only" FT /protein_id="ACS32907.1" FT /translation="MRALLRSTTDLTLGTIIMALSGLLFWLFAARLYPPDEIGTASALV FT SFMNLVFALSTLGLNIGLVRFHRIYGKGAAGTTVTAMVLLSTGFTTAYVLMNPGKVFER FT PGLIVGAYLLGLFGALYNALGFISIPLCRTEVYVKMSTLYGLRVVFLPIFRGLKASGMI FT LATSLGLAIASALGLTEFREQVSFTIDVEFIKESLALSLSNYLGSIVNVLPLYLMPTIV FT LVELGKARTGYYYIGFTIGNLMMTPIVALSTILIRDGEKALFRKSLALVLSYWVLAVVG FT IFWLGKPILEIFGGDYLAALPMLKMIALGLGPFGLVYIGISGLTVKGAAGRILAINLVR FT GLSFLILGYFLLTRQGITGIGVAWALAHLLAALLLDPKTF" FT gene complement(392485..394830) FT /locus_tag="TGAM_0406" FT /note="tg0406" FT CDS complement(392485..394830) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0406" FT /product="Oligosaccharyl transferase STT3 subunit" FT /note="10 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3U6" FT /db_xref="InterPro:IPR003674" FT /db_xref="UniProtKB/TrEMBL:C5A3U6" FT /inference="protein motif:CDD:COG1287, Uncharacterized FT membrane protein, required for N-linked glycosylation FT [General function prediction only]" FT /inference="protein motif:CDD:STT3, Oligosaccharyl FT transferase STT3 subunit" FT /inference="protein motif:COG:COG1287 Uncharacterized FT membrane protein, required for N-linked glycosylation; R FT General function prediction only" FT /inference="protein motif:HMMPfam:PF02516 STT3 FT InterPro:IPR003674 Oligosaccharyl transferase, STT3 subunit FT GO:Molecular Function:oligosaccharyl transferase activity FT (GO:0004576), Biological Process:protein amino acid FT glycosylation (GO:0006486), Cellular Component:membrane FT (GO:0016020)" FT /protein_id="ACS32908.1" FT /translation="MARKRGRKKGEIERGNKKEKTAALKRLKSPHHLAPALIALIAFLI FT RVIPYRLKYPIGYDPYFHLAYLQYVTEHGWVNYFPYALGPWGFLINHFHPKGLWGAPYT FT VYILGKWAGLSVYGAFKLTPPIFGTLTVLALYYTIKRIHSKEAALLSALILALTFGHIF FT RSMSNYYRGDNYALFWYSLVLLFFSFALFEKNLRRKATFYALGGLAGGLSSAFWSAYYI FT VLVLPLFVALGISAYYFLRGKDLMDGLLMALSTGIAAVVASLLGRVFGFGMFWVENWQG FT EKLLKLTGISPGPLQDAYLGLHLLIILPATVLMIALLWVLKSKIPEKARKIGTAGTLTV FT TVLVFTGLLWRYGNTLEILSAGLSAFGGAATAEMSRPGWWDIKTAYHVLLLFLLLYPLS FT LRKPKLCDAFALGSALPLLLLPLYWTRFLFLGSFGLALLGGIGGAEFLKLTKNDARPFG FT ILAVAVLLLIGGYHSVKATYEVKPIVDEHWETALKYLEGSSNENDIVLTWWDHGHWVTY FT FAHRAAVAQGTPSELVSTFYLGKTTKEDLLELGVDYVTVSLDTMLKWGSLKATAGQGNG FT YVLILLPFGEAYGDTVIFRNGNYQVAVRKNEKTWDVLVNAGGAQFIPNETWIEDKNGVY FT IANVTGKKAGNAYLYVNFNYGYAVLMDGETFRTPFARLMFTNNYPKDYTLVYTDGGMVK FT IFRLLHPNVALVREEGILKFENATGNTLRVYGYTDSGKMVFQRAYNVSGMNEFKIPPEV FT KGVVIRYTYLRDNVILDRGVFRRSDGWD" FT gene 394913..395728 FT /locus_tag="TGAM_0407" FT /note="tg0407" FT CDS 394913..395728 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0407" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3U7" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32909.1" FT /translation="MVMSLEKKLKAWLGILTVLVLILLLIDAAAVMFAVKIKGKAASSV FT DQAIESLQDLKTKTFQVKVPIHKTVKVPVNTTVRVHVSKTFHVRIEKTVEVEVDKSFEV FT NISDTVDVPINQEVSFNVPIDQVVNVPINTVTRVHIVQTVNTTAYNREKNLTLNVTVPI FT DKWVDVPINTTVKVHINTTVPVTTLVNTTTSVPINTTAVVPFHDKLEVPINTTVDVPFD FT DYFDVPIDQELEVPIDMEFTMNLTAEELGLNEMIDQAVQMLEEIKAGLG" FT gene 395725..396885 FT /gene="dpm1-1" FT /locus_tag="TGAM_0408" FT /note="tg0408" FT CDS 395725..396885 FT /codon_start=1 FT /transl_table=11 FT /gene="dpm1-1" FT /locus_tag="TGAM_0408" FT /product="Dolichol-phosphate mannosyltransferase (dpm1)" FT /EC_number="2.4.1.83" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3U8" FT /db_xref="InterPro:IPR001173" FT /db_xref="UniProtKB/TrEMBL:C5A3U8" FT /inference="protein motif:CDD:Glycos_transf_2, Glycosyl FT transferase" FT /inference="protein motif:CDD:WcaA, Glycosyltransferases FT involved in cell wall biogenesis [Cell envelope biogenesis, FT outer membrane]" FT /inference="protein motif:COG:COG0463 Glycosyltransferases FT involved in cell wall biogenesis; M Cell FT wall/membrane/envelope biogenesis" FT /inference="protein motif:Gene3D:G3D.3.90.550.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10859 FT GLYCOSYLTRANSFERASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10859:SF25 FT DOLICHYL-PHOSPHATE MANNOSE SYNTHASE-RELATED" FT /inference="protein motif:HMMPfam:PF00535 Glycos_transf_2 FT InterPro:IPR001173 Glycosyl transferase, family 2" FT /inference="protein motif:ProfileScan:PS50167 GLYC_TRANS FT InterPro:IPR001173 Glycosyl transferase, family 2" FT /inference="protein motif:superfamily:SSF53448 FT Nucleotide-diphospho-sugar transferases" FT /protein_id="ACS32910.1" FT /translation="MRVKPKSPLLQFFPGEVMDVSVILPTMNEEEAIRVVLPRIKGVLD FT GMGLDYEIIVVDKSSDQTPEIAKGLGAVVVRQRGRGYGDAYLEGFRRARGKYVLMLDPD FT GSYDPEDIPAILEPLLKDEADFVIGSRLKGEMDPGAMPWLHRRIGNPLLTWVLNLFFKA FT GISDAHCGMRAIKRDALEKLPLKCKGMEFASEMVIEAAKHGLRIREVPIRYHPRIGKSK FT LSSFKDGWRHLRLMLLYSPTHLFLIPGLLLLTLGLFLLAYTYVFEPIRLHTMILGSLLL FT ITGTQVLGFGVSAKVYAVKEGLEKPDRITGFFMRYSILEEGLLVGGILLLMGLVLGVRL FT FLQWRNANYGALFHIQEAILILTLITLGLQVVFFSFFISVYMLKEG" FT gene 396753..398027 FT /locus_tag="TGAM_0409" FT /note="tg0409" FT CDS 396753..398027 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0409" FT /product="Glycosyltransferase, family 1" FT /db_xref="GOA:C5A3U9" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:C5A3U9" FT /inference="protein motif:CDD:Glycos_transf_1, Glycosyl FT transferases group 1" FT /inference="protein motif:CDD:RfaG, Glycosyltransferase FT [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:COG:COG0438 Glycosyltransferase; FT M Cell wall/membrane/envelope biogenesis" FT /inference="protein motif:HMMPanther:PTHR12526 FT GLYCOSYLTRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR12526:SF1 FT GLYCOSYLTRANSFERASE" FT /inference="protein motif:superfamily:SSF53756 FT UDP-Glycosyltransferase/glycogen phosphorylase" FT /protein_id="ACS32911.1" FT /translation="MEECQLRCAVPHSGGHPDTDPHNPRPSGGLLLLLHQRVHAQGGLA FT LRILIVSPYFPPEGGGLESYAIAMVEELSKEHEVRVICMSRFGSSKETLRVQGKAVPLE FT RVKGFVLSNTPLSLRFTLRLFSIVKNWRPDLIIAHTPVPFAADVAALASALFGVPLIIV FT YHTLGLRKGALLDVIASIYSKTLERFTLSRAALLVAVSPSVRNYLRETGFRSVVVPPRP FT KLELLSAAQKKLPPKEKIVLFIGQLSSFHRFKNFELLLRAFAQASRDHPDWELWVVGGG FT DELPKYRTLARELGLSKRVRFFGPVSDAKKLAEIYSRASIVVLPSSFESFGLVVIEGAI FT FGAIPLVSGAVAKNIFPLYPGVGKASYVLRQKAELSSMLSELFGHPKTLKKLSAMLRET FT EGSRKSFKRFRYISVLLELNLLEKF" FT gene 398193..405296 FT /locus_tag="TGAM_0410" FT /note="tg0410" FT CDS 398193..405296 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0410" FT /product="Hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3V0" FT /db_xref="InterPro:IPR003344" FT /db_xref="InterPro:IPR013784" FT /db_xref="InterPro:IPR014766" FT /db_xref="UniProtKB/TrEMBL:C5A3V0" FT /inference="protein motif:Gene3D:G3D.2.60.40.1120 no FT description" FT /inference="protein motif:Gene3D:G3D.2.60.40.920 no FT description" FT /inference="protein motif:superfamily:SSF56601 FT InterPro:IPR012338 Penicillin-binding protein, FT transpeptidase fold" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32912.1" FT /translation="MNKRRKAQIFSLMLAFLMLASVIPGTFLKPVSAAGYITSVSAETN FT YGDGVLFAGFPYFVNVTINASSSTFANVTLYYEYQDGHNVTVYSRVVPITSPPGSINVL FT INSSDPTDVPPEYEKVPQDVSKVYLIVYEYDIANGNIPGTNRTFEFDVKFPFTVTYTIQ FT SSPSANWQAYYWNGSAWADDQAFVGMPFDIKVTIKYNSTLIGSGVTLPDPSNLTVILAN FT QTPVTWYHVGTGTESNGQIALQFENANLSTGEYNFSATGLVTNTPILNGVLERIVVEDN FT ENNLVNSIHTFHIWPLVMEITNVETQPPTLYQNLPFNVTLTGQVFANISGTLHNFTIVG FT SSLEGREAKIVDSDGNSHTMTFGFATGLVPNGGIGTAHWTNVQFSGTYFNATWADNILY FT IPVEPFGAGYYYYPRYKTIDYQYNPIPLNYWNLNVITSVTINGQSSSVFYINVPGELNI FT SVYYDDTNYYNLTTTANYEVLLNGNVIDSGTINVVNDTGWTVTTITPDELGMISVKVWD FT PVYHPDPAYSPQIEVRDWNVTSDYLVYYHYGGSIYPGKVFYVGVPSDLWVNATYTLGVN FT LTSSVNVTVYDEHNNIINSTIIPITNNYGAGFVLHNFVPPQIGYVTVKVYNGTYKVWTT FT YVIPIKDWGIYVDSTPENLTVGKSVPLTVEVRESLYFPGERDANVTLYLPDGTVKTETV FT TLEGSTYTGNGGYYGVVTFTNVTPTLPGLAKVVVEDLTSGKTAVKYIPVYPNGEVTGRW FT IDVKVTPEKTPVYAYVENSLRIDAQYYYNMGDGAYKDEVNSYVNITIIDADGSTYKLSN FT VPVVNGVVTIPSYQLPVNGTSPIYVELVDTINSSIRGVAEIPVQNWQVTFDITPDFVYQ FT YVDSIAKITVHVPAGVAVDVNVSGTVYTGVTDGQVISIPIVDPTEAIDVNVVATYHNAV FT AGKDYEVGSASKTIELRGWHVELSYSPSVIYTHIPDTLVVNAVAVDNETGEILPFELDV FT ALYNETLDVVATGTNTVSVSIQDDVGAGLTYFVTVSYGAHEMVTYEPILIDTHDWAIDV FT TKTITSSAYSGTDYLWAGVPAQITFSVVTYDLDTEEQINLPVSIPINVTYNGYTYTGTD FT SITINLASPEPASEAFHVEAAYEDISYVNDFVIPVKDWSIYVNAYPSKLYADLPQQLTL FT IIGYSAGIESVATVDVGGTTYTAHVEPVGEDSAIAVVNVGEVVASEGYVRVTVTDQYGK FT TATLKIPVVSWDIAVTSNVNFVYTNVSTDITVDVHYSDSMLDGNANVYLVLPDGTVLSQ FT TAIILDGKGQVTFTGVTADRAGNITIYAEDAASGKKSDNITIEVHDWHMEVTLEPTEWY FT TYLPQDYTVGIKYIDDVTEGIADIDSTVEVSYNLTGVTGSELVDVTGGQGEVTFTGLAT FT ENAGVGTFTVTDAAHGKSRIVNVTIHGWNVLVTYPEELFVAPGYKNPVVVGFEYIADDN FT STVPYTGNTTITIELPGNITLSANVNASPVDFGMIELNQTGVGTITVVANDYPAISFTG FT TIQVENLLEMNLTTKRIYENVPTEIVANITYNGGDYHELEVYIEGQNITLTTTDGQIWT FT AEVSLPAGNYTVVAYDTAHNITVTDTFHVVPWHLEIIPSTTSISAGDLEVVNFTVRAID FT DETNATADIDALIHVQITFSNPALIPNGTFTVEDFNLVDGEYTFNESLFAPAPGNFTVK FT AMAVDYGKCAKTVIEVTEPTVSPTWVYVDIVKEGSLEAPNDTVVLYWSVDGRTYFPAYD FT YLKQAIVQVDTTVTTRVVFPLYPVNEFTLYVIAVPKFIADKYPILTSTPIDATVTHEYV FT WYNYSVTVVNETISASAVVYKRTITEGWTYQIPRAPGYISVIPPASVQGIAPYTGYEFV FT HTEELVNDTGSASYTFTFEPTEFIEFNKISTLSIQPAQYGSYFEFEAVLYEKYLNMSGQ FT FDEQFEAFESNVESMVESLQFLSDDDKQELINEIINEALSYKDDIIGAYPEDEIPISGA FT EVQFHIDNPAIAYLEPVNATTDENGKVIVRLYSAAPKDATPEELVNYMGSVTIWATYDN FT MTTDSYTVSFGGIGSVSGDVVDPNNNLLPGAKVELWINDNGEWVIAKDYAGNNITTITD FT GHGHYSFNVPAAPQGTAYRVVAYYGDGTGYADVIVYPFKTSTADVVVTTYETTNVTGLG FT AFLSDAQIHDVKIVLGKNALTSVDYHAMDFLLEYIGVKPVYSDSDINVEGLSATDMIIA FT VGGPEVNDITAHYQELTPVRMVTNADGSISIVVDNETVANWSAPSPWWNVTEGYWVIQR FT VVDPDTGAVVYMIYGTDADSTWAAAYYFSKHFSELNNVNYVVGYWEDTDSMIYSPAFLK FT FASDDKNGFSPTDNIGVVVEG" FT gene 405323..407446 FT /locus_tag="TGAM_0411" FT /note="tg0411" FT CDS 405323..407446 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0411" FT /product="Conserved hypothetical protein" FT /note="11 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3V1" FT /protein_id="ACS32913.1" FT /translation="MFITTPSVVVLISKNSPMGKTLAAGVFLVVWFVIRFSSGRITTTF FT DEAYYLSTLRIGGVYSGMITPCVLRAVNAIISNPVISLLLVSLGLFIVYPFLLLRFHKS FT FSGYSSMSFPFFLALLLSSHLLWSSNEVRPQQIGTLVGLALLLFILRVHEEDLPRFKVL FT LGVSVLWVLLGLAHILSFAVFLALVWFVGVLELIRGRPLKVYFLSLVPSFFALFLLFMP FT GYETMVFSIKWMFKHSTNTLFHFLGWNFYSSLLLGWLFLLVSGPIVASLWRRTPTFSLI FT LERIRGEVVRRAGLYTLLGTLAMLALMILQFYLGRNVYELVYRSPNFIVIMQAGNFLFG FT ILTIAGFIGSLNEKRSDFSREVLVFMVVLMVFALLVSTVMPASFGSFGFRNWMIRMYQY FT FVVFSLPFVAREIEALLGSLQWRRAFVFILVFGITASVLNVSRPPIAYNYPYYWTGCDL FT ELLSRVGPGFVYKGDTLTPPENSLVLSFLGWAYGNRIEPYPGNVEPLPESDLCVSDLCH FT SPYPYREIPLTSVNLSRATIVTGNIPPDLVSWIRSLFHIRGEGDPVLALGNSTLNPLIS FT KLESQYFLPVVVNYSVITGPHFRYYFAIREGRIKGDVDRSMFVVQAVLVNDTPVIVISS FT PSLDGVAAGLWLLKNEILRNRTKWGNVSFVVGEWDEMDGRVLPIVRAYSGDKNGFSYGD FT RIKILRIGTVGKP" FT gene complement(407496..407684) FT /locus_tag="TGAM_0412" FT /note="tg0412" FT CDS complement(407496..407684) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0412" FT /product="Zn-finger protein, C2H2 type" FT /db_xref="GOA:C5A3V2" FT /db_xref="InterPro:IPR007087" FT /db_xref="InterPro:IPR013087" FT /db_xref="InterPro:IPR015880" FT /db_xref="UniProtKB/TrEMBL:C5A3V2" FT /inference="protein motif:CDD:COG4049, Uncharacterized FT protein containing archaeal-type C2H2 Zn-finger [General FT function prediction only]" FT /inference="protein motif:COG:COG4049 Uncharacterized FT protein containing archaeal-type C2H2 Zn-finger; R General FT function prediction only" FT /inference="protein motif:Gene3D:G3D.3.30.160.60 no FT description" FT /inference="protein motif:HMMPfam:PF00096 zf-C2H2 FT InterPro:IPR007087 Zinc finger, C2H2-type GO:Molecular FT Function:nucleic acid binding (GO:0003676), Cellular FT Component:nucleus (GO:0005634), Molecular Function:zinc ion FT binding (GO:0008270)" FT /inference="protein motif:HMMSmart:SM00355 no description FT InterPro:IPR007087 Zinc finger, C2H2-type GO:Molecular FT Function:nucleic acid binding (GO:0003676), Cellular FT Component:nucleus (GO:0005634), Molecular Function:zinc ion FT binding (GO:0008270)" FT /inference="protein motif:ProfileScan:PS50157 FT ZINC_FINGER_C2H2_2 InterPro:IPR007087 Zinc finger, FT C2H2-type GO:Molecular Function:nucleic acid binding FT (GO:0003676), Cellular Component:nucleus (GO:0005634), FT Molecular Function:zinc ion binding (GO:0008270)" FT /inference="protein motif:ScanRegExp:PS00028 FT ZINC_FINGER_C2H2_1 InterPro:IPR007087 Zinc finger, FT C2H2-type GO:Molecular Function:nucleic acid binding FT (GO:0003676), Cellular Component:nucleus (GO:0005634), FT Molecular Function:zinc ion binding (GO:0008270)" FT /inference="protein motif:superfamily:SSF57667 C2H2 and FT C2HC zinc fingers" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32914.1" FT /translation="MVELKAITFIDRDGELYYRCPRCGMVFRKSRDYIRHVNKAHGWLF FT RGGRPKGKRALKKLGKE" FT gene complement(407733..408542) FT /locus_tag="TGAM_0413" FT /note="tg0413" FT CDS complement(407733..408542) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0413" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3V3" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32915.1" FT /translation="MRFEVLSKDDMNELSRQLSRAGIMNRKIEEVRKEVSHYVIIAGRY FT GELFEKAEGIPPVEEALHSIRGVYQRVFLSREIGEEISPEELLEEMDGGLALLEALASE FT GAIEEKGEKLKVVSKPPLEDLEIELRFPLDELGENLEELEKRFSPRMITEVAMMKAYYV FT EVLEVDRELIEAALEIAREYSTEESYVEAMFVGIARSVLADVILRLAERTRRKDELIEK FT LLEMEPLSVEGERETVQVYFDEETIESFLKELQTLGYLKVKGNRIWA" FT gene complement(408592..408957) FT /locus_tag="TGAM_0414" FT /note="tg0414" FT CDS complement(408592..408957) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0414" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3V4" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32916.1" FT /translation="MVHEYIKGKIKEFTKEEKEKRYKYLGKEVIDVGDPGLDSIPEFYG FT IANAIWRDWKNGEISTKTALGRLALLKLLTYKTKNRKIQDIPEEELEEVRKFIDYVIQV FT IRNESRRRGEPEEERNA" FT gene complement(409004..410098) FT /locus_tag="TGAM_0415" FT /note="tg0415" FT CDS complement(409004..410098) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0415" FT /product="Membrane protein, putative transporter" FT /note="8 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3V5" FT /db_xref="InterPro:IPR000620" FT /db_xref="UniProtKB/TrEMBL:C5A3V5" FT /inference="protein motif:CDD:DUF6, Integral membrane FT protein DUF6" FT /inference="protein motif:CDD:RhaT, Permeases of the FT drug/metabolite transporter (DMT) superfamily [Carbohydrate FT transport and metabolism / Amino acid transport and FT metabolism / General function prediction only]" FT /inference="protein motif:COG:COG0697 Permeases of the FT drug/metabolite transporter (DMT) superfamily; G FT Carbohydrate transport and metabolism" FT /inference="protein motif:HMMPfam:PF00892 DUF6 FT InterPro:IPR000620 Protein of unknown function DUF6, FT transmembrane GO:Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32917.1" FT /translation="MERAWSFTTKFIHHYFKAVPHHLHLGWGNSDSRYFHRHVLVLRHL FT RHLIGRSNGNLKSVSKTKGLETLVQEKNEGVRVRRMKREEAILLGITAIWGSTFPVMKV FT SLNYSEPMTFLVYRFGIASLLMLLIFRRRTLRWSTFWRGFVLGVTLFLGHGFQIVGLKY FT TTPSNSAFITSLYVVFTPFVAYFILGERIRRRDVESLLLALLGLYLISGASLKFNYGDL FT LTVLCAVSFAFQIVLVERFGENDYLSLSFWQIFWNFILSTLYITITGELTLWRNSVPWL FT GALYTGAFATVLAFTLQIKYQKYIKAYRAALIYSTEPIFGHIASLLVFGKPLSPEGYLG FT ALLILGAIWREIRNEQHQLPPEHF" FT gene 409958..410398 FT /locus_tag="TGAM_0416" FT /note="tg0416" FT CDS 409958..410398 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0416" FT /product="Stress reponse protein, putative, OsmC-like FT protein" FT /db_xref="GOA:C5A3V6" FT /db_xref="InterPro:IPR003718" FT /db_xref="InterPro:IPR015946" FT /db_xref="UniProtKB/TrEMBL:C5A3V6" FT /inference="protein motif:CDD:COG1765, Predicted redox FT protein, regulator of disulfide bond formation FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:OsmC, OsmC-like protein" FT /inference="protein motif:COG:COG1765 Predicted redox FT protein, regulator of disulfide bond formation; O FT Posttranslational modification, protein turnover, FT chaperones" FT /inference="protein motif:HMMPfam:PF02566 OsmC FT InterPro:IPR003718 OsmC-like protein GO:Biological FT Process:response to stress (GO:0006950)" FT /inference="protein motif:superfamily:SSF82784 OsmC-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32918.1" FT /translation="MAKMPKYKDMPVKISGIRVSPTKMKVVGNGFEIVVDKLGGEAPSP FT LHYQLAALAGCLNIVGTLVAKDLKIDVEGMEVEIVGIFNPSKFMGVDNGRAGFKEIDVT FT IRVKTDADEETLKKWLSLVEERCPISDNLANPTPVRIEIERE" FT gene complement(410400..410708) FT /locus_tag="TGAM_0417" FT /note="tg0417" FT CDS complement(410400..410708) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0417" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3V7" FT /protein_id="ACS32919.1" FT /translation="MKRLVRELLGEDLANYLELLRAKLAFAEELYGVKMNYVPLIPEGE FT VVILDRRDGLIKWLKSKEPLNEHELRKLSKRIKRNLESGYVEMLLAMNMSCINGPGE" FT gene 410812..412539 FT /locus_tag="TGAM_0418" FT /note="tg0418" FT CDS 410812..412539 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0418" FT /product="Glycoside hydrolase/deacetylase, putative" FT /note="Contains SSF88713 domain" FT /db_xref="GOA:C5A3V8" FT /db_xref="InterPro:IPR011330" FT /db_xref="UniProtKB/TrEMBL:C5A3V8" FT /inference="protein motif:HMMPfam:PF03065 Glyco_hydro_57 FT InterPro:IPR004300 Glycoside hydrolase, family 57 FT GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:carbohydrate metabolism (GO:0005975)" FT /inference="protein motif:superfamily:SSF88713 Glycoside FT hydrolase/deacetylase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32920.1" FT /translation="MFMKYAHHFHAYQPGDIVYVNDGDGSGPIEYEERKSPVAVRIGDE FT EVRGENWTRAMLYSYERISEVLSRLKGVSVDIEPFTFFMLLRYQKKALEETVELFESID FT AVPTVPFHPIMPHLDEFEQKILARVSFDFYAPLIGDKPVIGYWLPEAVITGKTAQLIES FT LTEKKLVFLLDERQLLYDFPQAKYSCNRYGNSFVFGREWSLSDAFAFNTLDVSGLVNET FT LSRRDEYKEKLGVPYLIFTASDLESLLGNPAQLDRFVAWMDALGRSRVERISAPSFVWR FT KLSSEFRRLEGECSFEMPVKDYSSWSDYFDLSLDGKTSDSRWLGYRRVDGRVFAREVDG FT RKISQLWKVAFTRLFGELNRTVRLGVLTGLKELNAGPEEFLVRYARIFFRDYYGYFGIE FT TSLDYVLEPAGGDRNALKLGRIYYLMLLANHSCPRFWENLDTRVAFSNVSVMAKALIEL FT MKYFEGSELWSLFLGAYLKLLNFENLYHLWKLSAMPSMEGWETSEKAWHEALKPEVPTS FT GYNVVTRAALYVGKRDLRGDLRGIIEGYNLEWAVADTGHIAGEKHGLWENPQYCEHGR" FT gene complement(412536..413900) FT /gene="cca" FT /locus_tag="TGAM_0419" FT /note="tg0419" FT CDS complement(412536..413900) FT /codon_start=1 FT /transl_table=11 FT /gene="cca" FT /locus_tag="TGAM_0419" FT /product="tRNA nucleotidyltransferase (CCA adding enzyme) FT (cca)" FT /EC_number="2.7.7.72" FT /db_xref="GOA:C5A3V9" FT /db_xref="InterPro:IPR002934" FT /db_xref="InterPro:IPR008229" FT /db_xref="InterPro:IPR011068" FT /db_xref="InterPro:IPR015329" FT /db_xref="UniProtKB/Swiss-Prot:C5A3V9" FT /inference="protein motif:CDD:CCA1, tRNA FT nucleotidyltransferase (CCA-adding enzyme) [Translation, FT ribosomal structure and biogenesis]" FT /inference="protein motif:COG:COG1746 tRNA FT nucleotidyltransferase (CCA-adding enzyme); J Translation, FT ribosomal structure and biogenesis" FT /inference="protein motif:Gene3D:G3D.3.30.460.10 no FT description" FT /inference="protein motif:HMMPfam:PF01909 NTP_transf_2 FT InterPro:IPR002934 DNA polymerase, beta-like region FT GO:Molecular Function:nucleotidyltransferase activity FT (GO:0016779)" FT /inference="protein motif:HMMPIR:PIRSF005335 tRNA FT nucleotidyltransferase (CCA-adding enzyme), archaeal type FT InterPro:IPR008229 tRNA nucleotidyltransferase, CCA-adding FT enzyme GO:Biological Process:tRNA 3'-terminal CCA addition FT (GO:0001680), Molecular Function:RNA binding (GO:0003723), FT Molecular Function:tRNA adenylyltransferase activity FT (GO:0004810)" FT /inference="protein motif:superfamily:SSF81301 FT Nucleotidyltransferase" FT /protein_id="ACS32921.1" FT /translation="MEMEEVLSEVIQRIRPSDEERAFVKGLMEELRTIAEERIEELGLD FT ARPYFVGSLAKDTYLAGDHDIDLFLAFPLETPLEELRKKGLELGKAIAEKLDSHEIAYA FT EHPYVRARYRGVRVDLVPCYDVGNWRDVRTAVDRSILHTRWVNENLRGRNDEVRLLKRF FT LKGINAYGSEIYVRGFSGYLAEILVIKYGSFLDVVEKADFLLRQKIIDPENWLRKEPEV FT ALKTVKRETEEDRPLIVIDPVDPRRNVSANLSWEKYGRFYFKSIEFLENPSVGFFFPPE FT KPKGSYLDELRKRGTALVTLLINVPDMVDDVLLPQLERSARGFERTLEREGFGVLGWDV FT GRKGRAFIMLELDRERRERVKIKPGPEFFTERGRDFYRKNEKVWLIGKRLYSEKLVRES FT VVDVIIELLEKNQVSLGKGIRDAIRRADILLNYVPKELEEEAYLFLSREKWNIKG" FT gene complement(413906..414460) FT /gene="ligT" FT /locus_tag="TGAM_0420" FT /note="tg0420" FT CDS complement(413906..414460) FT /codon_start=1 FT /transl_table=11 FT /gene="ligT" FT /locus_tag="TGAM_0420" FT /product="2'-5' RNA ligase (ligT)" FT /EC_number="6.5.1.-" FT /db_xref="GOA:C5A3W0" FT /db_xref="InterPro:IPR004175" FT /db_xref="InterPro:IPR009097" FT /db_xref="InterPro:IPR014051" FT /db_xref="UniProtKB/TrEMBL:C5A3W0" FT /inference="protein motif:CDD:2_5_RNA_ligase, 2',5' RNA FT ligase family" FT /inference="protein motif:CDD:LigT, 2'-5' RNA ligase FT [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:COG:COG1514 2'-5' RNA ligase; J FT Translation, ribosomal structure and biogenesis" FT /inference="protein motif:HMMPfam:PF02834 2_5_RNA_ligase FT InterPro:IPR004175 2',5' RNA ligase GO:Molecular FT Function:2'-5'-RNA ligase activity (GO:0008664), Biological FT Process:RNA metabolism (GO:0016070)" FT /inference="protein motif:HMMPIR:PIRSF005272 2'-5' RNA FT ligase, prokaryotic LigT type" FT /inference="protein motif:HMMTigr:TIGR02258 FT 2_5_ligase:2'-5' RNA ligase InterPro:IPR004175 2',5' RNA FT ligase GO:Molecular Function:2'-5'-RNA ligase activity FT (GO:0008664), Biological Process:RNA metabolism FT (GO:0016070)" FT /inference="protein motif:superfamily:SSF55144 LigT-like FT InterPro:IPR009097 Appr>p cyclic nucleotide FT phosphodiesterase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32922.1" FT /translation="MRAFIAIDVSDEVRDNLLKAQERIGSKAAKIKFVERENFHVTLKF FT LGEIDEVTAEEVKKALAEIARKHKKHRVRVKGIGVFPNPNYVRVIWAGIENDEGIKAIA FT NDVEREMRRLGFKKDKDFVAHITIGRVKFVRDKVELAMALKDLANEDFGEFEVEAIELK FT KSTLTPKGPIYETVAKFELAE" FT gene complement(414500..414964) FT /locus_tag="TGAM_0421" FT /note="tg0421" FT CDS complement(414500..414964) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0421" FT /product="Phosphoribosyltransferase" FT /db_xref="GOA:C5A3W1" FT /db_xref="InterPro:IPR000836" FT /db_xref="UniProtKB/TrEMBL:C5A3W1" FT /inference="protein motif:CDD:COG2236, Predicted FT phosphoribosyltransferases [General function prediction FT only]" FT /inference="protein motif:CDD:Hpt, Hypoxanthine-guanine FT phosphoribosyltransferase [Nucleotide transport and FT metabolism]" FT /inference="protein motif:CDD:Pribosyltran, Phosphoribosyl FT transferase domain" FT /inference="protein motif:CDD:PyrE, Orotate FT phosphoribosyltransferase [Nucleotide transport and FT metabolism]" FT /inference="protein motif:COG:COG2236 Predicted FT phosphoribosyltransferases; R General function prediction FT only" FT /inference="protein motif:Gene3D:G3D.3.40.50.2020 no FT description" FT /inference="protein motif:HMMPanther:PTHR11608 FT HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00156 Pribosyltran FT InterPro:IPR000836 Phosphoribosyltransferase GO:Biological FT Process:nucleoside metabolism (GO:0009116)" FT /inference="protein motif:superfamily:SSF53271 PRTase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32923.1" FT /translation="MDKVYLTWWQVDRAVFALAEEIRKHFMPDVIVGIARGGLIPAVRL FT SHVLGDVELKVIDVKFYKDIEERMEKPKITIPLHGSLEGKKVVIVDDVSDTGKTLEVVI FT EEVKKAGAKEVKVACLSMKPWTKVVPDFYVFRTDKWIVFPWEEFPVVVRE" FT gene complement(415130..417865) FT /gene="nrdA" FT /locus_tag="TGAM_0422" FT /note="tg0422" FT CDS complement(415130..417865) FT /codon_start=1 FT /transl_table=11 FT /gene="nrdA" FT /locus_tag="TGAM_0422" FT /product="Ribonucleoside-diphosphate reductase alpha FT subunit (nrdA)" FT /EC_number="1.17.4.1" FT /db_xref="GOA:C5A3W2" FT /db_xref="InterPro:IPR000788" FT /db_xref="InterPro:IPR005144" FT /db_xref="InterPro:IPR008926" FT /db_xref="InterPro:IPR013344" FT /db_xref="InterPro:IPR013509" FT /db_xref="UniProtKB/TrEMBL:C5A3W2" FT /inference="protein motif:CDD:ATP-cone, ATP cone domain" FT /inference="protein motif:CDD:NrdA, Ribonucleotide FT reductase, alpha subunit [Nucleotide transport and FT metabolism]" FT /inference="protein motif:CDD:NrdD, Oxygen-sensitive FT ribonucleoside-triphosphate reductase [Nucleotide transport FT and metabolism]" FT /inference="protein motif:CDD:Ribonuc_red_lgC, FT Ribonucleotide reductase, barrel domain" FT /inference="protein motif:CDD:RNR_1, RNR, class I" FT /inference="protein motif:CDD:RNR_1_like, RNR, class I_like FT family" FT /inference="protein motif:CDD:RNR_PFL, RNR_PFL" FT /inference="protein motif:COG:COG0209 Ribonucleotide FT reductase, alpha subunit; F Nucleotide transport and FT metabolism" FT /inference="protein motif:FPrintScan:PR01183 RIBORDTASEM1 FT InterPro:IPR000788 Ribonucleotide reductase large subunit, FT C-terminal GO:Molecular Function:ribonucleoside-diphosphate FT reductase activity (GO:0004748), Cellular FT Component:ribonucleoside-diphosphate reductase complex FT (GO:0005971), Biological Process:DNA replication FT (GO:0006260)" FT /inference="protein motif:Gene3D:G3D.1.10.395.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.90.244.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11573 FT RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN FT InterPro:IPR013508 Ribonucleotide reductase large subunit" FT /inference="protein motif:HMMPanther:PTHR11573:SF1 FT RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN" FT /inference="protein motif:HMMPfam:PF00317 Ribonuc_red_lgN FT InterPro:IPR013509 Ribonucleotide reductase large subunit, FT N terminal" FT /inference="protein motif:HMMPfam:PF02867 Ribonuc_red_lgC FT InterPro:IPR000788 Ribonucleotide reductase large subunit, FT C-terminal GO:Molecular Function:ribonucleoside-diphosphate FT reductase activity (GO:0004748), Cellular FT Component:ribonucleoside-diphosphate reductase complex FT (GO:0005971), Biological Process:DNA replication FT (GO:0006260)" FT /inference="protein motif:HMMPfam:PF03477 ATP-cone FT InterPro:IPR005144 ATP-cone" FT /inference="protein motif:HMMTigr:TIGR02504 FT NrdJ_Z:ribonucleoside-diphosphate reductase FT InterPro:IPR013344 Ribonucleoside-diphosphate reductase, FT adenosylcobalamin-dependent" FT /inference="protein motif:superfamily:SSF51998 PFL-like FT glycyl radical enzymes" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32924.1" FT /translation="MAVEKVMKRDGRIVPFDRERIRWAIKRAMLEVGVHDDKLLNRVVR FT RVVRRINELYDGQVPHIENIQDIVELELMRAGLFEVAKAYILYRKKKAEIREEKKKILN FT KDRLDEIDKRFSLNALRVLASRYLIRNEKGEIIESPRELFERVATLAVIPDLLYDERVY FT DKNGKHEQDLSRVKYYLEHFEEFDGRYSIGRFKLNKYHFERLVNLYRELAEKGRMKVSI FT DEFLGMLENGAFDDYESEVEEYFRLMTGQVFMPNTPALINSGRPLGMLSACFVVPIEDD FT MESIMKAAHDVAMIQKSGGGTGLNFSKLRPEGDFVGSTAGAASGPVSFMHLIDAVSDVI FT KQGGVRRGANMGILEVWHPDIEKFIHAKEKNIGTNVLSNFNISVGIWEDFWEALRDGKR FT YPLVNPRTGEKVKEIDPKSLFEELAFMAWSKADPGVIFFDVINRRNVLEPAKGGPIRAT FT NPCGEEPLYEYESCNLASINLAKFVKYDDEGKPYFDWDEYAYVIQKVAKYLDNAIDVNR FT FPLPEIDYNTKLTRRIGVGMMGLADALFKLGIPYNSEEGFAFMRKATEYLTFYAYKYSV FT EAAKKRGTFPLYEKSRYKDGELPVEGFYHREIWNLPWDELVEEIKKHGVRNGMVTTCPP FT TGSVSMIADTSSGIEPIFALVYKKSVTVGEFYYVDPVFEAELKKRGLWSDEILKKISDN FT YGSVQGLEEIPEDMQRVFVTSMDVHWLDHILAQANIQLWLTDSASKTINMPNDATVEDV FT KAAYLLAYKLGCKGITVYRDGSLSVQVYSVEGEKRKRVPAKPSRYAVEKLKAVVEAEPW FT LAKFINVEAILNGTNGKGKAALPSGLTFSVAHITPAKPPVREHPHHAEKPEIPEEKIKE FT LLGVAYCPVCYERDGELVELRMESGCATCPRCGWSKCVIS" FT gene complement(418056..418490) FT /locus_tag="TGAM_0423" FT /note="tg0423" FT CDS complement(418056..418490) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0423" FT /product="Conserved hypothetical protein" FT /db_xref="GOA:C5A3W3" FT /db_xref="InterPro:IPR003251" FT /db_xref="InterPro:IPR009078" FT /db_xref="InterPro:IPR012347" FT /db_xref="UniProtKB/TrEMBL:C5A3W3" FT /inference="protein motif:superfamily:SSF47240 FT Ferritin-like InterPro:IPR009078 Ferritin/ribonucleotide FT reductase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32925.1" FT /translation="MNVKELLEALIRQENELYNLHKLGETFATFEKIEFADTFRLMAEE FT ELRHRKTLESMLSEGSLEESEMIDYLDALSLEPVLKDERAEPKSLEELVVEALIREQHA FT YEMYSKLSKILGGSLGHIFRMMAGEELKHVYRLKIMYEAL" FT gene complement(418492..419301) FT /locus_tag="TGAM_0424" FT /note="tg0424" FT CDS complement(418492..419301) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0424" FT /product="Haloacid dehalogenase-like hydrolase" FT /note="Belongs to subfamily IIA" FT /db_xref="GOA:C5A3W4" FT /db_xref="InterPro:IPR006357" FT /db_xref="InterPro:IPR023214" FT /db_xref="InterPro:IPR023215" FT /db_xref="UniProtKB/TrEMBL:C5A3W4" FT /inference="protein motif:CDD:NagD, Predicted sugar FT phosphatases of the HAD superfamily [Carbohydrate transport FT and metabolism]" FT /inference="protein motif:COG:COG0647 Predicted sugar FT phosphatases of the HAD superfamily; G Carbohydrate FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.1000 no FT description" FT /inference="protein motif:HMMPanther:PTHR19288 FT 4-NITROPHENYLPHOSPHATASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR19288:SF17 FT 4-NITROPHENYLPHOSPHATASE-RELATED" FT /inference="protein motif:HMMPfam:PF00702 Hydrolase FT InterPro:IPR005834 Haloacid dehalogenase-like hydrolase FT GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:HMMTigr:TIGR01460 FT HAD-SF-IIA:HAD-superfamily hydrolase, sub FT InterPro:IPR006357 HAD-superfamily hydrolase, subfamily IIA FT GO:Biological Process:metabolism (GO:0008152), Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:superfamily:SSF56784 HAD-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32926.1" FT /translation="MNMIGIIFDMDGVVYRGNRPIDGAGETIEFIKKRGIPFVFLTNNS FT TRTPEMYRQKLLHMGIDVPAGSIVTSGLAARIYMEKHFEPGRIFVIGGKGLEIEMESLG FT WGIIGLEDCRAGRWKEIEYVVVGLDPNLTYEKLKYGTLAIRNGANFIGTNPDTTYPAEE FT GLYPGAGAIIAALRASTEREPLIIGKPNEPAYEVAKEKLGPVDEIWMVGDRLDTDITFA FT KRFGMKAIMVLTGVNSLEDLEKSNVRPDLVFPSIKELKDYLSTVLGD" FT gene complement(419364..420035) FT /locus_tag="TGAM_0425" FT /note="tg0425" FT CDS complement(419364..420035) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0425" FT /product="Zn-dependent hydrolase of the beta-lactamase fold FT family" FT /db_xref="GOA:C5A3W5" FT /db_xref="InterPro:IPR001279" FT /db_xref="InterPro:IPR022877" FT /db_xref="UniProtKB/TrEMBL:C5A3W5" FT /inference="protein motif:CDD:COG2220, Predicted FT Zn-dependent hydrolases of the beta-lactamase fold [General FT function prediction only]" FT /inference="protein motif:COG:COG2220 Predicted FT Zn-dependent hydrolases of the beta-lactamase fold; R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.60.15.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11935 GLYOXALASE" FT /inference="protein motif:HMMPanther:PTHR11935:SF7 FT GLYOXYLASE-RELATED" FT /inference="protein motif:HMMPfam:PF00753 Lactamase_B FT InterPro:IPR001279 Beta-lactamase-like" FT /inference="protein motif:superfamily:SSF56281 FT Metallo-hydrolase/oxidoreductase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32927.1" FT /translation="MVKVKFLGHAAFLIEGSKKILIDPFLSGNPQAAVKPEEVEADLIL FT VTHAHGDHIGDAVEIAKRTGAKIVAMYDIANYISEQGNVEVIGMNYGPTEIDGVGIVQV FT PAWHSSSDGKYGIGNPCGYIVKLDGKTIYHAGDTFVFLDMGLFAELYGPIDVALLPIGG FT HFTMGPREAAKAVELLKPKKVVPMHYNTWPPISADPEEFKKLVGDKAEVVILKPGESLE FT L" FT gene 420201..421577 FT /gene="acdA-3" FT /locus_tag="TGAM_0426" FT /note="tg0426" FT CDS 420201..421577 FT /codon_start=1 FT /transl_table=11 FT /gene="acdA-3" FT /locus_tag="TGAM_0426" FT /product="Acetyl-CoA synthetase (ADP forming), alpha chain FT (acdA)" FT /EC_number="6.2.1.13" FT /db_xref="GOA:C5A3W6" FT /db_xref="InterPro:IPR003781" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR016102" FT /db_xref="UniProtKB/TrEMBL:C5A3W6" FT /inference="protein motif:CDD:CoA_binding, CoA binding FT domain" FT /inference="protein motif:CDD:COG1042, Acyl-CoA synthetase FT (NDP forming) [Energy production and conversion]" FT /inference="protein motif:CDD:SucD, Succinyl-CoA FT synthetase, alpha subunit [Energy production and FT conversion]" FT /inference="protein motif:COG:COG1042 Acyl-CoA synthetase FT (NDP forming); C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.261 no FT description" FT /inference="protein motif:HMMPanther:PTHR11117 SUCCINYL-COA FT SYNTHETASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11117:SF2 FT SUCCINYL-COA SYNTHETASE InterPro:IPR005810 Succinyl-CoA FT ligase, alpha subunit GO:Molecular Function:catalytic FT activity (GO:0003824), Biological Process:metabolism FT (GO:0008152)" FT /inference="protein motif:HMMPfam:PF02629 CoA_binding FT InterPro:IPR003781 CoA-binding" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /inference="protein motif:superfamily:SSF52210 Succinyl-CoA FT synthetase domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32928.1" FT /translation="MNLDYFFKPRGIAIIGASNDPMKLGYEVFKNLKKYRDGRVYPVNV FT KDEVVQGVKAYKNVKDIPDEVDLAIIVVPKRFVKQAIIDCGEKGVKGAVIITAGFGETG FT EEGKKEERELVEIAHKYGMRLIGPNCVGVMNTHNDMNATFIMDAKKGSIAFVSQSGALG FT AGIVYKTVKEGIGFSKFVSVGNMADLDFAELMEYLAETGEDKAIALYIEGLKDGRKFIE FT VAKKVTKKKPVIALKAGKSESGARAASSHTGSLAGSWKIYEAAFKQSGVLIAETIDDML FT SMARAFTQPLPKGKRVAIMTNAGGPGVLTADQIDKRGLKLADLEEKTIEELRSFLPPMA FT AVKNPVDMIASARGEDYYRTAKLLLQDPNVDMLIAICVVPTFAGMTPTEHAEGVIRAVK FT EVNNGKPVLGLFMAGYVSEKAKELLEENGIPSYERPEDVAAGAYALVQQAKNAGVLEEE FT " FT gene 421618..423561 FT /gene="iorA-1" FT /locus_tag="TGAM_0427" FT /note="tg0427" FT CDS 421618..423561 FT /codon_start=1 FT /transl_table=11 FT /gene="iorA-1" FT /locus_tag="TGAM_0427" FT /product="Indolepyruvate ferredoxin oxidoreductase alpha FT subunit (iorA)" FT /EC_number="1.2.7.8" FT /db_xref="GOA:C5A3W7" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR002880" FT /db_xref="InterPro:IPR009014" FT /db_xref="InterPro:IPR011766" FT /db_xref="InterPro:IPR017721" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A3W7" FT /inference="protein motif:COG:COG4231 Indolepyruvate FT ferredoxin oxidoreductase, alpha and beta subunits; C FT Energy production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.40.50.970 no FT description" FT /inference="protein motif:HMMPanther:PTHR11615 FT NADH-UBIQUINONE OXIDOREDUCTASE FE-S PROTEIN 1" FT /inference="protein motif:HMMPanther:PTHR11615:SF18 IRON FT HYDROGENASE" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:HMMPfam:PF01855 POR_N FT InterPro:IPR002880 Pyruvate flavodoxin/ferredoxin FT oxidoreductase, N-terminal GO:Biological Process:electron FT transport (GO:0006118), Molecular Function:oxidoreductase FT activity (GO:0016491)" FT /inference="protein motif:HMMPfam:PF02775 TPP_enzyme_C FT InterPro:IPR011766 Thiamine pyrophosphate enzyme, FT C-terminal TPP-binding GO:Molecular Function:catalytic FT activity (GO:0003824), Molecular Function:thiamin FT pyrophosphate binding (GO:0030976)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF52518 Thiamin FT diphosphate-binding fold (THDP-binding)" FT /inference="protein motif:superfamily:SSF52922 FT InterPro:IPR009014 Transketolase, C-terminal-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32929.1" FT /translation="MAKVTDIVLWDKPGERVLLLGNHAIARGALEANIAVFAAYPGTPS FT SELTDTMAAVAKKAGVYMEYSTNEKVAFETALSAAWSGLRAMTAMKHVGLNVAADTFLS FT AVGMGVEGGFVIMVADDPSMWSSQNEQDTRVYAKFANVPVLEPSSPHEAKEMTKYAFEL FT SEKFKHFVILRTTTRSSHARGDVVLGELPDEIKQGRRKFGNFKKDPSRFVDIPANARRF FT HPQVLEKIEKIREELNNCPFNWIEGDENAKVGIIAPGLAYAYVKEALAWLGVENVKILK FT LGTPFPVPYGLLEKFLDGLEKVLIVEELEPVVEEQVKTWAYDKGLRIPIHGKDLVPRVY FT EMTTRRAVEAIAKFLGLETPINFEEIDEKYEKVQAMVPPRPPSLCPACPHRNTFYAIRR FT AASPRAIFPSDIGCYTLGVLPPLKTVDTTVAMGASIGVAHGLDVALNGVPGEEERRTGK FT EKKIIVATIGDSTFFHTGLPALANAIYNRSNVVIVVLDNLVTAMTGDQPNPGTGETPHG FT PGKRIKIEEVAKALGADYVKVVDPYDIKATERAIKEALAVEGVGVVVARQPCALYRIGQ FT MRRKGERWPIYHVIEEKCTGCKICINAYGCPAIYWDAEKKKARIDPTICWGCGGCAQVC FT PFDAFEPMKEGE" FT gene 423563..424171 FT /gene="iorB-1" FT /locus_tag="TGAM_0428" FT /note="tg0428" FT CDS 423563..424171 FT /codon_start=1 FT /transl_table=11 FT /gene="iorB-1" FT /locus_tag="TGAM_0428" FT /product="Indolepyruvate ferredoxin oxidoreductase beta FT subunit (iorB)" FT /EC_number="1.2.7.8" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A3W8" FT /db_xref="InterPro:IPR002869" FT /db_xref="InterPro:IPR017719" FT /db_xref="InterPro:IPR019752" FT /db_xref="UniProtKB/TrEMBL:C5A3W8" FT /inference="protein motif:CDD:POR, Pyruvate FT ferredoxin/flavodoxin oxidoreductase" FT /inference="protein motif:CDD:PorG, Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, gamma subunit [Energy production and FT conversion]" FT /inference="protein motif:COG:COG1014 Pyruvate:ferredoxin FT oxidoreductase and related 2-oxoacid:ferredoxin FT oxidoreductases, gamma subunit; C Energy production and FT conversion" FT /inference="protein motif:Gene3D:G3D.3.40.920.10 no FT description" FT /inference="protein motif:HMMPfam:PF01558 POR FT InterPro:IPR002869 Pyruvate ferredoxin/flavodoxin FT oxidoreductase GO:Biological Process:electron transport FT (GO:0006118), Molecular Function:oxidoreductase activity FT (GO:0016491)" FT /inference="protein motif:superfamily:SSF53323 FT Pyruvate-ferredoxin oxidoreductase, PFOR, domain III" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32930.1" FT /translation="MREYNIVITGVGGQGILTAANLLGWAALRAGYKVRVGEVHGMSQR FT FGSVIAYVRFGEDVYGAMVPEGKADVILSFEPVEALRYINYLKKGGLVFTNARPIPPVQ FT VSMGLASYPSLEEIKKVVEEDFEAKFMAFDAEKLAIEAGNIITTNVVLIGALTQTPGFP FT LSAEHVREVIKVSVPKKAVDVNMKAFDLGVKAAKEMLGL" FT gene complement(424293..425309) FT /locus_tag="TGAM_0429" FT /note="tg0429" FT CDS complement(424293..425309) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0429" FT /product="Acetylpolyamine amidohydrolase, histone FT deacetylase superfamily" FT /db_xref="GOA:C5A3W9" FT /db_xref="InterPro:IPR000286" FT /db_xref="InterPro:IPR023801" FT /db_xref="UniProtKB/TrEMBL:C5A3W9" FT /inference="protein motif:CDD:Hist_deacetyl, Histone FT deacetylase family" FT /inference="protein motif:COG:COG0123 Deacetylases, FT including yeast histone deacetylase and acetoin utilization FT protein; B Chromatin structure and dynamics" FT /inference="protein motif:FPrintScan:PR01270 HDASUPER FT InterPro:IPR000286 Histone deacetylase superfamily" FT /inference="protein motif:Gene3D:G3D.3.40.800.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR10625 HISTONE FT DEACETYLASE-RELATED InterPro:IPR000286 Histone deacetylase FT superfamily" FT /inference="protein motif:HMMPanther:PTHR10625:SF18 HISTONE FT DEACETYLASE-RELATED" FT /inference="protein motif:HMMPfam:PF00850 Hist_deacetyl FT InterPro:IPR000286 Histone deacetylase superfamily" FT /inference="protein motif:superfamily:SSF52768 FT Arginase/deacetylase" FT /protein_id="ACS32931.1" FT /translation="MIKDTSEVTTLYSPIFLEHRPRDYHPENPDRLLRAVRALQRLNLW FT KPIEPVPVPEEELLMVHSRDYVELIREKSRAFSYLDPDTYVSPGTWEAALTAFGASQMA FT VEIALKTGGMALALVRPPGHHAGKAGRAFNASTLGFCIFNNAAYAAKVAEELAGKVLII FT DFDAHHGNGTQEILWNDPNAVHIDLHERDIYPWSGYEHDVGGKNAEGTKINLPMPHYSG FT DDDYIYAWDEVVLPLLAQLRPKLVVVSAGFDGFLGENLTTLRLSELFFAYAGSTLSRYP FT LAVIFEGGYSVGLGKGLPAFIRGYLSGEIREVPVSPSYEALRTVARVKEVQSEWWEF" FT gene complement(425290..425892) FT /locus_tag="TGAM_0430" FT /note="tg0430" FT CDS complement(425290..425892) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0430" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3X0" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32932.1" FT /translation="MSEAVLEWLRSGRDDAEDIVDLPWEVKKVEENHYVAEHPKIPFIL FT NVVFADGFIRLAVPSGIETIAMRLEERLKTYHTLLVLNERMNMLKFTLSGMNDEITLRV FT DLDEKSLGKEEFNDALTALLVGMNVLMDSLGLTEEFQEAIFERLGMMIIERLQRGMSEA FT EIINFLVKKVGMKMEEAKELLEHIKSAIGESDDKGYF" FT gene 425987..426844 FT /gene="speB" FT /locus_tag="TGAM_0431" FT /note="tg0431" FT CDS 425987..426844 FT /codon_start=1 FT /transl_table=11 FT /gene="speB" FT /locus_tag="TGAM_0431" FT /product="Agmatinase, putative, arginase family protein FT (speB)" FT /EC_number="3.5.3.11" FT /db_xref="GOA:C5A3X1" FT /db_xref="InterPro:IPR005925" FT /db_xref="InterPro:IPR006035" FT /db_xref="InterPro:IPR023696" FT /db_xref="UniProtKB/TrEMBL:C5A3X1" FT /inference="protein motif:CDD:Arginase, Arginase family" FT /inference="protein motif:CDD:SpeB, FT Arginase/agmatinase/formimionoglutamate hydrolase, arginase FT family [Amino acid transport and metabolism]" FT /inference="protein motif:COG:COG0010 FT Arginase/agmatinase/formimionoglutamate hydrolase, arginase FT family; E Amino acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.800.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11358 FT ARGINASE-RELATED InterPro:IPR006035 FT Arginase/agmatinase/formiminoglutamase GO:Molecular FT Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMPanther:PTHR11358:SF6 FT AGMATINASE" FT /inference="protein motif:HMMPfam:PF00491 Arginase FT InterPro:IPR006035 Arginase/agmatinase/formiminoglutamase FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMTigr:TIGR01230 FT agmatinase:agmatinase, putative InterPro:IPR005925 Putative FT agmatinase GO:Biological Process:polyamine biosynthesis FT (GO:0006596), Molecular Function:agmatinase activity FT (GO:0008783)" FT /inference="protein motif:superfamily:SSF52768 FT Arginase/deacetylase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32933.1" FT /translation="MEFLYTYEAFKLELPLVSPERADFVILGVPFDGTTSYKSGARFGP FT TLIRQATLNLESYVLDYDIDIADLPIADIGDIAVVAGDPRKTADRVRETIEELERVNPK FT AIPVLLGGEHSQTLGAVEALKPKSYVVFDAHLDLRDSYEDNPYNHACVARRIAELGIRE FT AMFGIRSGTREEVEFAEKNGIRWVHARDYGFDSFVDLVEPLPEPVYLSVDIDVFDVSMV FT PDTGTPEAGGLRFWEVIEAIEWLTANKRIVGFDIMEVAGERLGNPTALTAAKLLFYFLA FT MMKR" FT gene complement(426847..427317) FT /locus_tag="TGAM_0432" FT /note="tg0432" FT CDS complement(426847..427317) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0432" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3X2" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32934.1" FT /translation="MKVEGFVASLRNAETIGELFKILQEKGAPIVELDGQRFLIVVEGD FT FEGRPFWTEINGERANQALGDAMLNSSSFPFKCRRPYTGGNVIFVNFDDIEVEKFLVAY FT RDPDYGIFYLVEDGEAREITKEDYEKLKGEMPEFKVKSMSDEQMDMMGAFFG" FT gene 427389..429113 FT /locus_tag="TGAM_0433" FT /note="tg0433" FT CDS 427389..429113 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0433" FT /product="Voltage-gated ClC-type chloride channel" FT /note="12 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3X3" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR001807" FT /db_xref="InterPro:IPR014743" FT /db_xref="UniProtKB/TrEMBL:C5A3X3" FT /inference="protein motif:CDD:CBS, CBS domain" FT /inference="protein motif:CDD:COG0517, FOG:CBS domain FT [General function prediction only]" FT /inference="protein motif:CDD:COG4109, Predicted FT transcriptional regulator containing CBS domains FT [Transcription]" FT /inference="protein motif:CDD:EriC, Chloride channel FT protein EriC [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:Voltage_CLC, Voltage gated FT chloride channel" FT /inference="protein motif:COG:COG0038 Chloride channel FT protein EriC; P Inorganic ion transport and metabolism" FT /inference="protein motif:FPrintScan:PR00762 CLCHANNEL FT InterPro:IPR001807 Cl- channel, voltage gated GO:Molecular FT Function:voltage-gated chloride channel activity FT (GO:0005247), Biological Process:chloride transport FT (GO:0006821), Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:HMMPanther:PTHR11689 CHLORIDE FT CHANNEL InterPro:IPR001807 Cl- channel, voltage gated FT GO:Molecular Function:voltage-gated chloride channel FT activity (GO:0005247), Biological Process:chloride FT transport (GO:0006821), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:HMMPanther:PTHR11689:SF1 CHLORIDE FT CHANNEL PROTEIN" FT /inference="protein motif:HMMPfam:PF00571 CBS FT InterPro:IPR000644 CBS" FT /inference="protein motif:HMMPfam:PF00654 Voltage_CLC FT InterPro:IPR001807 Cl- channel, voltage gated GO:Molecular FT Function:voltage-gated chloride channel activity FT (GO:0005247), Biological Process:chloride transport FT (GO:0006821), Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:HMMSmart:SM00116 no description FT InterPro:IPR000644 CBS" FT /inference="protein motif:ProfileScan:PS50147 SNF4_REP FT InterPro:IPR000644 CBS" FT /inference="protein motif:superfamily:SSF54631 CBS-domain" FT /inference="protein motif:superfamily:SSF81340 Clc chloride FT channel" FT /protein_id="ACS32935.1" FT /translation="MMTSGNGAYLRKWGIVMAFSILAGVVGGLGAVVFRLMIRFTHKFF FT FGMLLPRLSFTLYHLNLGYVLLPAIGGLFVALLVVRFPDIKGNGIPEVIEAVIFKGGRI FT GGVFAIAKIVATSVTIGSGGSVGREGPIGFIGAALTSAFAKWFGLSREMRKLLVTCGLA FT AGIAGTFNTPLAGAMFALEVVYMGAFSINLVPIFIASVTGNAVTLAVLRRAFEVEIPGG FT MGHTLPELPFFFVLGLLLGALAALYVRVIYAFIEGFERLPVPEVFKPVLGGLGVGLLGA FT FFPNYGIFGVGYEGMSLAFYGKLVVWLLLTLGVLKMLATALTIGSGQSGGVFAPSLYIG FT TMFGSAFGMVVAKLFPSLGAMPTVYALAGMAAFFSGMTQAPITQILMVTELTRSYAILP FT AVMTSATMGFLTARFFLKGESVYTLKLVRKGYRVRTGKPVILETISVGEIMTREPVYVT FT ADMTLFDVEHLISETGHDCFPVVDNEGRVIGIIGVKDILKKPSSLKRMRVRRFLRRAYG FT VTYPTETAETALEKLMAYDQNLLPVVRGPNDRRLIGVVTKKDIYTAYYRGLEGMYID" FT gene 429123..430388 FT /locus_tag="TGAM_0434" FT /note="tg0434" FT CDS 429123..430388 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0434" FT /product="Phosphoesterase, putative" FT /note="Contains PHP domain" FT /db_xref="GOA:C5A3X4" FT /db_xref="InterPro:IPR005287" FT /db_xref="InterPro:IPR016195" FT /db_xref="UniProtKB/TrEMBL:C5A3X4" FT /inference="protein motif:CDD:COG1379, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:COG:COG1379 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF02811 PHP FT InterPro:IPR004013 PHP, C-terminal" FT /inference="protein motif:HMMTigr:TIGR00375 FT TIGR00375:conserved hypothetical protein T FT InterPro:IPR005287 Conserved hypothetical protein 375" FT /inference="protein motif:superfamily:SSF63393 RBP12 FT subunit of RNA polymerase II" FT /inference="protein motif:superfamily:SSF89550 PHP domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32936.1" FT /translation="MLVDADLHIHSRYSKAVSKAMTIPNLAENARFKGLGLVGTGDILS FT PHWEAELLKYAKKVDEGTYELNGVRFLLTTEVEDSRRVHHVLIFPSIETVREMRERLRP FT YSNDIDTEGRPHINLSAGEIADMANELGVLIGPAHAFTPWTSLYKEYDSLEEAYGGAKI FT HFLELGLSADSEMADMIKAHHRLTYLSNSDAHSPMPHRLGREFNRFEVKEPTFEEIRKA FT ILRHGGRRIVLNAGLDPRLGKYHLTACSRCYAHYSLGEAKAFKWRCPKCGGRIKKGVRD FT RILELADTNERPKDRPPYLRLAPLAEIISMVIGKGVETKAVRLIWERFLREFGSEIMVL FT VDVPVGELARVHEEVAKAIWAYRNGKLIVIPGGGGKYGEIKLPEEIRRARVEELESVEV FT EVPEETERLRQRSITDFLKVAR" FT gene 430476..430721 FT /locus_tag="TGAM_0435" FT /note="tg0435" FT CDS 430476..430721 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0435" FT /product="Transcription regulator, SpoVT/AbrB family" FT /db_xref="InterPro:IPR006339" FT /db_xref="InterPro:IPR007159" FT /db_xref="UniProtKB/TrEMBL:C5A3X5" FT /inference="protein motif:COG:COG2002 Regulators of FT stationary/sporulation gene expression; K Transcription" FT /inference="protein motif:HMMPfam:PF04014 SpoVT_AbrB FT InterPro:IPR007159 SpoVT/AbrB-like" FT /inference="protein motif:HMMTigr:TIGR01439 FT lp_hng_hel_AbrB:transcriptional regu InterPro:IPR006339 FT Transcriptional regulator AbrB" FT /inference="protein motif:superfamily:SSF54742 FT Transcription-state regulator AbrB, the N-terminal DNA FT recognition domain" FT /protein_id="ACS32937.1" FT /translation="MMGVEVVKVSTKGQVVIPKEIRDALGIRNGDYLVVMEKNGYIVMK FT KLSVEDVFKEGEELAKTLEITREDVIRAVGDVRYED" FT gene 430777..431736 FT /gene="thiL" FT /locus_tag="TGAM_0436" FT /note="tg0436" FT CDS 430777..431736 FT /codon_start=1 FT /transl_table=11 FT /gene="thiL" FT /locus_tag="TGAM_0436" FT /product="Thiamine monophosphate kinase (thiL)" FT /EC_number="2.7.4.16" FT /db_xref="GOA:C5A3X6" FT /db_xref="InterPro:IPR000728" FT /db_xref="InterPro:IPR006283" FT /db_xref="InterPro:IPR010918" FT /db_xref="InterPro:IPR016188" FT /db_xref="UniProtKB/TrEMBL:C5A3X6" FT /inference="protein motif:CDD:AIRS, AIR synthase related FT protein, N-terminal domain" FT /inference="protein motif:CDD:COG2144, Selenophosphate FT synthetase-related proteins [General function prediction FT only]" FT /inference="protein motif:CDD:HypE, Hydrogenase maturation FT factor [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:HypE_N, HypE (Hydrogenase FT expression/formation protein)" FT /inference="protein motif:CDD:PurM, FT Phosphoribosylaminoimidazole (AIR) synthetase [Nucleotide FT transport and metabolism]" FT /inference="protein motif:CDD:ThiL, Thiamine monophosphate FT kinase [Coenzyme metabolism]" FT /inference="protein motif:CDD:ThiL_N, ThiL FT (Thiamine-monophosphate kinase) plays a dual role in de FT novo biosynthesis and in salvage of exogenous thiamin" FT /inference="protein motif:COG:COG0611 Thiamine FT monophosphate kinase; H Coenzyme transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.30.70.460 no FT description" FT /inference="protein motif:HMMPfam:PF00586 AIRS FT InterPro:IPR000728 AIR synthase related protein FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMPfam:PF02769 AIRS_C FT InterPro:IPR010918 AIR synthase related protein, FT C-terminal" FT /inference="protein motif:HMMPIR:PIRSF005303 Thiamine FT monophosphate kinase InterPro:IPR006283 FT Thiamine-monophosphate kinase GO:Molecular Function:thiamin FT phosphate kinase activity (GO:0009030), Biological FT Process:thiamin biosynthesis (GO:0009228)" FT /inference="protein motif:HMMTigr:TIGR01379 FT thiL:thiamine-monophosphate kinase InterPro:IPR006283 FT Thiamine-monophosphate kinase GO:Molecular Function:thiamin FT phosphate kinase activity (GO:0009030), Biological FT Process:thiamin biosynthesis (GO:0009228)" FT /inference="protein motif:superfamily:SSF55326 FT Aminoimidazole ribonucleotide synthetase (PurM) N-terminal FT domain" FT /inference="protein motif:superfamily:SSF56042 FT Aminoimidazole ribonucleotide synthetase (PurM) C-terminal FT domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32938.1" FT /translation="MMESEIIELFIRHLKRQGDLPLGDDAGALRLGDRWLVATNDMLVR FT KTDVPDIMTPEQVGFKAVTMNVSDMASMGAEPLGFLFSLGIPGDLDSDYLEGIARGIGE FT ALDFYGLPVLSADTNEADDLIIDGAALGITERLLTRSGAKPGELVCVTGDLGRALAGYL FT VWKNGLEVSDAVRKPLYEKFLEPRARVREGSELSKVASSAIDISDGLAKELYLLAEMSQ FT VGIEVRPESLPLGKGVEEVAELLGLDPFEIALASGEEFELVFTVAPEFVESLNFDFSVI FT GRVTRGKGIYLVDDSGKRVMPKLGWEHLTGFQMKILYS" FT gene 431763..432152 FT /locus_tag="TGAM_0437" FT /note="tg0437" FT CDS 431763..432152 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0437" FT /product="Transcription regulator, arsR family" FT /db_xref="GOA:C5A3X7" FT /db_xref="InterPro:IPR001845" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A3X7" FT /inference="protein motif:CDD:HTH_ARSR, helix_turn_helix, FT Arsenical Resistance Operon Repressor" FT /inference="protein motif:COG:COG0640 Predicted FT transcriptional regulators; K Transcription" FT /inference="protein motif:FPrintScan:PR00778 HTHARSR FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMPfam:PF01022 HTH_5 FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:HMMSmart:SM00418 no description FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:ProfileScan:PS50987 HTH_ARSR_2 FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32939.1" FT /translation="MKVKDLINMLSDRQRKSVEGCLERCDLLDPEEEIAKEIPQDVVEF FT SKIIANPIRASILKMLSNRWLCVCLIAKALDQDQTLISHHLRTLKRFNLLHEKREGKLR FT FYRTNREVLERYLEKLSLELLGGRS" FT gene 432149..432430 FT /locus_tag="TGAM_0438" FT /note="tg0438" FT CDS 432149..432430 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0438" FT /product="Nucleotide pyrophosphohydrolase, MazG-like FT protein" FT /db_xref="GOA:C5A3X8" FT /db_xref="InterPro:IPR004518" FT /db_xref="InterPro:IPR012359" FT /db_xref="UniProtKB/TrEMBL:C5A3X8" FT /inference="protein motif:COG:COG1694 Predicted FT pyrophosphatase; R General function prediction only" FT /inference="protein motif:superfamily:SSF63491 BAG domain" FT /protein_id="ACS32940.1" FT /translation="MKLQGEVDELIKALGGYWKPFEMLAALVEETGELAEAMLAFEGVK FT GKGQRDALVEEIGDVLFALACIANHYGVDLEGALRQTIAKYRRRFDGD" FT gene 432499..433380 FT /locus_tag="TGAM_0439" FT /note="tg0439" FT CDS 432499..433380 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0439" FT /product="Conserved hypothetical protein" FT /note="Belongs to UPF0104 family; 5 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR005242" FT /db_xref="InterPro:IPR022791" FT /db_xref="UniProtKB/TrEMBL:C5A3X9" FT /inference="protein motif:CDD:COG0392, Predicted integral FT membrane protein [Function unknown]" FT /inference="protein motif:CDD:UPF0104, Uncharacterised FT protein family (UPF0104)" FT /inference="protein motif:COG:COG0392 Predicted integral FT membrane protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF03706 UPF0104 FT InterPro:IPR005242 Conserved hypothetical protein 374" FT /inference="protein motif:HMMTigr:TIGR00374 FT TIGR00374:conserved hypothetical protein InterPro:IPR005242 FT Conserved hypothetical protein 374" FT /protein_id="ACS32941.1" FT /translation="MVLENFVQSAEEYIGVLRHVPIHYLLLAIGTYYLSVFLFALRWKY FT VLKGTGVEVPLAELFKANLAGLFMNNITPMSRGGGELLRMAWISKLQGVPMRISAVTVV FT YERILESIPVMVMVTLGFLYFTTSEALALIPLVIGLALVWFKWEKFIELTLRLFRVNLS FT EEERERIVALRKCGDVNLIGIGTSSLVWVLDVLRLKLITLAIGLNVSFPVLILVSIINL FT MLGIAAFTPGGVGVVESGLIGALTYLGFPPALAVSTVLLERFISYVLGSISGLLVLFTS FT GGREVWRALKSR" FT gene 433356..434501 FT /locus_tag="TGAM_0440" FT /note="tg0440" FT CDS 433356..434501 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0440" FT /product="Glycosyltransferase, family 1" FT /db_xref="GOA:C5A3Y0" FT /db_xref="InterPro:IPR001296" FT /db_xref="UniProtKB/TrEMBL:C5A3Y0" FT /inference="protein motif:CDD:GlgA, Glycogen synthase FT [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:Glycos_transf_1, Glycosyl FT transferases group 1" FT /inference="protein motif:CDD:RfaG, Glycosyltransferase FT [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:COG:COG0438 Glycosyltransferase; FT M Cell wall/membrane/envelope biogenesis" FT /inference="protein motif:HMMPanther:PTHR12526 FT GLYCOSYLTRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR12526:SF1 FT GLYCOSYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00534 Glycos_transf_1 FT InterPro:IPR001296 Glycosyl transferase, group 1 FT GO:Biological Process:biosynthesis (GO:0009058)" FT /inference="protein motif:superfamily:SSF53756 FT UDP-Glycosyltransferase/glycogen phosphorylase" FT /protein_id="ACS32942.1" FT /translation="MESLKIALVSDWYYPKLGGVAVHMHDLALYLRKLGHEVDIITNDR FT ETGKETELKREGIGLIKVPGYTFGSIGINMTVFSRNASRLIPYVRNYDVVHGQHAFTPL FT ALKAVSAGRKAGKATLLTTHSINYENSPVIKALARMAFPYFRYYLGNPHRIIAVSRASK FT EFMRRFTRIPIEVIQNGVNVDFFDVPLSKEEAKEKLGLGERVILYVGRLEPRKGISTLI FT NAMKHVDGTLLIAGQGSMLPLLRERAKLLGVSKKVKFLGVVEYSRLPLYYRASDVFVLP FT SLSEAFGIVLLEAMASGTPVIGTKVGGIPEIIDGCGLLVPPGNAKELANAINLVLNNQS FT VERRLSRLGKRRVEKVYDWNVVVRKIEALYREVLDEVVGDG" FT gene 434494..435216 FT /locus_tag="TGAM_0441" FT /note="tg0441" FT CDS 434494..435216 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0441" FT /product="Polysaccharide deacetylase, putative" FT /db_xref="GOA:C5A3Y1" FT /db_xref="InterPro:IPR002509" FT /db_xref="InterPro:IPR011330" FT /db_xref="UniProtKB/TrEMBL:C5A3Y1" FT /inference="protein motif:CDD:Polysacc_deac_1, FT Polysaccharide deacetylase" FT /inference="protein motif:COG:COG0726 Predicted FT xylanase/chitin deacetylase; G Carbohydrate transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF01522 Polysacc_deac_1 FT InterPro:IPR002509 Polysaccharide deacetylase GO:Biological FT Process:carbohydrate metabolism (GO:0005975), Molecular FT Function:hydrolase activity, acting on carbon-nitrogen (but FT not peptide) bonds (GO:0016810)" FT /inference="protein motif:superfamily:SSF88713 Glycoside FT hydrolase/deacetylase" FT /protein_id="ACS32943.1" FT /translation="MDKIVILTFDVEEDCPPFAETRRGMEEGLPRVMDLLEEFKIKGTF FT LFTGRIAEEFPELAERAGKKHELGCHGLEHERFDRLSFEEAKRRLEEAREILSRFSDPV FT SFRAPNFQFPDMYYRILAELGFKVDSTKARHKGWGEGVTEINGVLEVPATTTSIVTRLP FT WKIQKRFHRKFESPIVYIFHPWEFVRMPRTLRPDCWFGTGESALEKLRKLIEFHLDNGA FT RFLTLREFYEEYQKLKRE" FT gene 435232..436290 FT /locus_tag="TGAM_0442" FT /note="tg0442" FT CDS 435232..436290 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0442" FT /product="Radical SAM family protein, lectins/glucanases FT related" FT /db_xref="GOA:C5A3Y2" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR016431" FT /db_xref="UniProtKB/TrEMBL:C5A3Y2" FT /inference="protein motif:CDD:PflA, Pyruvate-formate FT lyase-activating enzyme [Posttranslational modification, FT protein turnover, chaperones]" FT /inference="protein motif:CDD:PflX, Uncharacterized Fe-S FT protein PflX, homolog of pyruvate formate lyase activating FT proteins [General function prediction only]" FT /inference="protein motif:CDD:Radical_SAM, Radical SAM FT superfamily" FT /inference="protein motif:COG:COG1180 Pyruvate-formate FT lyase-activating enzyme; O Posttranslational modification, FT protein turnover, chaperones" FT /inference="protein motif:HMMPfam:PF04055 Radical_SAM FT InterPro:IPR007197 Radical SAM GO:Molecular FT Function:catalytic activity (GO:0003824), Molecular FT Function:iron ion binding (GO:0005506)" FT /inference="protein motif:superfamily:SSF49899 Concanavalin FT A-like lectins/glucanases InterPro:IPR008985 Concanavalin FT A-like lectin/glucanase" FT /inference="protein motif:superfamily:SSF57095 Scorpion FT toxin-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32944.1" FT /translation="MRVMREALYWEPLEGGKVRCKLCPLNCIISEGKRGSCRIRKNIGG FT KLYTLNYGKVSAIGADPVEKKPLFHFWPGSCALSISTVGCNMHCKHCQNWEISQADETF FT PYLHDMTPEMVVEITKRYGCESIAYTYNEPVIWYEFVLDTAKLAKKEGIYNLLITNGYI FT NEEPFRELAPYIDAMNIDIKAFSDEFYMKIASVPSGEPSRRTAVIAKKDFGIHVELTYL FT IIPTLNDKEEEIRAFARWVVNELGDDTPVHFSRFFPHYKLLHLPPTPLETMDMAYRVAK FT EEGLKFVYIGNVPGHPGENTYCPRCGRPLIVRYGFEITEYNITEDGRCKYCGEKIPIVG FT TYKKKHYPGMWW" FT gene 436281..437084 FT /locus_tag="TGAM_0443" FT /note="tg0443" FT CDS 436281..437084 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0443" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR020292" FT /db_xref="UniProtKB/TrEMBL:C5A3Y3" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32945.1" FT /translation="MVVRVIEAILYFEALGRTRLAVEDRVRKTSRGLEGSRLDVKRLEV FT GEVIEEPELDPLRFSALLEARVEGGLEDLVEVVARYGPTLVEILRPGRLELRAEDLSRL FT LLGLSRTISDLVEGDIQVPVPLSLKEIPVPQVGFDEEELWEMIYQDRGILYGLSLRLPE FT EIAEDTLLKLLLLEGCGVNSIEARDLDGGSEFRLEVVSPFESLFAVVFKYRPFSLNVIE FT PEVFDITAPELQNALSDLGSFVNSLLMGEDLQKAYERDTFSFKLV" FT gene 437150..439033 FT /locus_tag="TGAM_0444" FT /note="tg0444" FT CDS 437150..439033 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0444" FT /product="S-layer protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A3Y4" FT /db_xref="InterPro:IPR006454" FT /db_xref="InterPro:IPR022650" FT /db_xref="InterPro:IPR022651" FT /db_xref="UniProtKB/TrEMBL:C5A3Y4" FT /inference="protein motif:CDD:S_layer_C, S-layer like FT family, C-terminal region" FT /inference="protein motif:CDD:S_layer_N, S-layer like FT family, N-terminal region" FT /inference="protein motif:HMMPfam:PF05123 S_layer_N FT InterPro:IPR006454 S-layer protein GO:Cellular FT Component:cell wall (GO:0005618)" FT /inference="protein motif:HMMPfam:PF05124 S_layer_C FT InterPro:IPR006454 S-layer protein GO:Cellular FT Component:cell wall (GO:0005618)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32946.1" FT /translation="MLMKILRKNVTKVFALLLGVMFLLSIGGASAGSNYIVPTGLKDIS FT NVPRSFFVKPDGTPNVKIVVGSYAKAEDVASAADIAAALGSVLYKEEEAKNIAVKLRKA FT GETDVALEQVIYRYDYETMTSDHNLPYNSGLVNWSKSYDELPADYWFNGASYTANYSTW FT ASSFSAQFKVKDSDAVNGEYLYGWDIEINELSLLPIDPADWDGVAPPKQADIEIPSRRI FT VVSVDYTLYNYTVKKTEVVREAYPEWGVPAETIVVNESRIGNSIDVELDNGTIVGTISP FT GVGAGDEFTLLGTKYHVFSVGMGSFTAGEVLGTGWFAQNESKLLGNSRWEITLIGADPL FT QEKAIVTVKDTKTGELYGPVVLRLGEPKDVVVTGDTVELQLKLEALSENLILGKIAQIS FT GYGNIKTYSSGTYVEYNDQRWIMSVDSDGEYIKRISMTNEDELIGNPLDVLGIYTIKYS FT FDMRSLNEKDVDFDINRDGSITDTSYVVAKATITILENHPKIHELVLSVGDRIPGTDYV FT ISGVGGVKNIVLKTPTQPITILDTEVNFVNPTSNYILVGSNKANLLTSMIFGHYHLPVD FT FRVWFGEYPVLGYIPHCDLLKGRSVIIVAGSTPKATRKAATILMQYIAGLS" FT gene 439030..439710 FT /locus_tag="TGAM_0445" FT /note="tg0445" FT CDS 439030..439710 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0445" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A3Y5" FT /protein_id="ACS32947.1" FT /translation="MILSFLVVLMSKRYLLVTFVFILLLLGGFLIDSWYSAYTSLFRSD FT FPSKAMIQNEGVRVEGYLPGDPLDLVNATLYHHYERVTVILGSGDTKDYCDRTGKCQFR FT TLAAVEISCLVGKLMGSYYYETAREMGYNDSAARKFALDQVSRRVNSGNWLTFSLKLAI FT GRGEIGNEKHLLIILRGPLDGAVENRIYVPRKGVLVLEALDDRTLYREALLVEGITGIS FT CSKG" FT gene complement(439716..440294) FT /gene="tbp-1" FT /locus_tag="TGAM_0446" FT /note="tg0446" FT CDS complement(439716..440294) FT /codon_start=1 FT /transl_table=11 FT /gene="tbp-1" FT /locus_tag="TGAM_0446" FT /product="TATA box-binding protein, transcription FT initiation factor TFIID (tbp)" FT /db_xref="GOA:C5A3Y6" FT /db_xref="InterPro:IPR000814" FT /db_xref="InterPro:IPR012294" FT /db_xref="UniProtKB/TrEMBL:C5A3Y6" FT /inference="protein motif:CDD:TBP, Transcription factor FT TFIID (or TATA-binding protein, TBP)" FT /inference="protein motif:CDD:TBP_archaea, archaeal TATA FT box binding protein (TBP):TBPs are transcription factors FT present in archaea and eukaryotes, that recognize promoters FT and initiate transcription" FT /inference="protein motif:CDD:TBP_eukaryotes, eukaryotic FT TATA box binding protein (TBP):Present in archaea and FT eukaryotes, TBPs are transcription factors that recognize FT promoters and initiate transcription" FT /inference="protein motif:CDD:TBP_TLF, TATA box binding FT protein (TBP):Present in archaea and eukaryotes, TBPs are FT transcription factors that recognize promoters and initiate FT transcription" FT /inference="protein motif:CDD:TLF, TBP-like factors (TLF" FT /inference="protein motif:COG:COG2101 TATA-box binding FT protein (TBP), component of TFIID and TFIIIB; K FT Transcription" FT /inference="protein motif:FPrintScan:PR00686 TIFACTORIID FT InterPro:IPR000814 TATA-box binding" FT /inference="protein motif:Gene3D:G3D.3.30.310.10 no FT description InterPro:IPR012295 Beta2-adaptin/TATA-box FT binding, C-terminal" FT /inference="protein motif:HMMPanther:PTHR10126 TATA-BOX FT BINDING PROTEIN InterPro:IPR000814 TATA-box binding" FT /inference="protein motif:HMMPanther:PTHR10126:SF3 TATA-BOX FT BINDING PROTEIN" FT /inference="protein motif:HMMPfam:PF00352 TBP FT InterPro:IPR000814 TATA-box binding" FT /inference="protein motif:ScanRegExp:PS00351 TFIID FT InterPro:IPR000814 TATA-box binding" FT /inference="protein motif:superfamily:SSF55945 TATA-box FT binding protein-like InterPro:IPR012294 Transcription FT factor TFIID, C-terminal/DNA glycosylase, N-terminal" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32948.1" FT /translation="MVDISNVKLRIENIVASVDLFAELNLEKVIEICPNSKYNPEEFPG FT IICRFDEPKVALLIFSSGKLVVTGAKSVEDIERAVKKLTEMLKTKVGTKFTKPPQIDIQ FT NMVFSGDIGMEFNLDAVALSLPNCEYEPEQFPGVIYRAKDPKAVILLFSSGKIVCSGAK FT SEKDAWEAVKKLLRELEKYGLIGEEEEEW" FT gene complement(440396..442099) FT /locus_tag="TGAM_0447" FT /note="tg0447" FT CDS complement(440396..442099) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0447" FT /product="Conserved hypothetical protein" FT /note="Contains DUF505 domain" FT /db_xref="InterPro:IPR007548" FT /db_xref="UniProtKB/TrEMBL:C5A3Y7" FT /inference="protein motif:CDD:COG1542, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:DUF505, Protein of unknown FT function (DUF505)" FT /inference="protein motif:COG:COG1542 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF04458 DUF505 FT InterPro:IPR007548 Protein of unknown function DUF505" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32949.1" FT /translation="MYLKRRHLEILREMKKTDSQTEIEAKLPEEFQIRAIELYILGFAE FT LEGGKIKLTEAGRKLLEITELLNLDELPEVVADTEIMKMLELLEETGKVPEGWLEKLKE FT RKLADENGLTEFGKALLKLYRETHPVVYLTPEIVSFLRGMPKIGTLDELITYKNSKLYG FT DNIVNALQAMRLLLISPPTENGRAFATTPAAKLALKAVSMIPVFARAIVLRKEDFEALK FT AGRSNAELESMGLADEKGTTEFGKAVMETYEAMGRVEEKVLPIYLLNDELAVLKVIKEI FT EEKYETNPDILPTEKEIGKRVEVEDLGAILHLLESKELVERRLVKNRDTYWLTEWGKEA FT INFGTVSPDAMKAVTYAESGDVPIAEWVIKAQEEGVVKAGVTDKGRFYLKLSRSIKRKP FT FLTRYDAAILAKTPRKKYIHRDELVELVRDYVGGDEKEIIRAIGEAEAKGFVVELQNGM FT VKLTELGDKVKTALENAKLQEIVKVKFSVTPTLYNVLRVIYEELETFNRIWKEKGEIRG FT YKMEEVDVIRKHLSLSDDEIKKALTMLRQLGFLGSKSLTEAGKVLVEAYL" FT gene complement(442197..443039) FT /locus_tag="TGAM_0448" FT /note="tg0448" FT CDS complement(442197..443039) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0448" FT /product="Conserved hypothetical protein" FT /note="Contains DUF114 domain, putative ClpP protease; 1 FT probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A3Y8" FT /db_xref="InterPro:IPR002825" FT /db_xref="UniProtKB/TrEMBL:C5A3Y8" FT /inference="protein motif:CDD:DUF114, Protein of unknown FT function DUF114" FT /inference="protein motif:CDD:SppA, Periplasmic serine FT proteases (ClpP class) [Posttranslational modification, FT protein turnover, chaperones / Intracellular trafficking FT and secretion]" FT /inference="protein motif:COG:COG0616 Periplasmic serine FT proteases (ClpP class); O Posttranslational modification, FT protein turnover, chaperones" FT /inference="protein motif:Gene3D:G3D.3.90.226.10 no FT description" FT /inference="protein motif:HMMPfam:PF01972 DUF114 FT InterPro:IPR002825 Protein of unknown function DUF114" FT /inference="protein motif:superfamily:SSF52096 FT ClpP/crotonase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32950.1" FT /translation="MDPLSGFLGSLLWWLFFLYILMWPQLQYRQLQIMRAKLLAKIAKK FT RNSTVITMIHRQESIGFFGIPVYKFISVEDSEEILRAIRAAPKDKPIDLIIHTPGGLVL FT AATQIARALKEHPAETRVIVPHYAMSGGTLIALAADRIIMDPNAVLGPVDPQLGQYPAP FT SIVKAVEQKGAEKVDDQTLILADVAKKAIKQVQDFVFYLLKDRYGEEKARQLAQTLTEG FT RWTHDYPITVDHAKEMGLHVETDVPEEVYALMELYKQPVRQRGTVEFMPYPVKQEGAK" FT gene 443148..443576 FT /locus_tag="TGAM_0449" FT /note="tg0449" FT CDS 443148..443576 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0449" FT /product="Conserved hypothetical protein" FT /note="Contains DUF356 domain" FT /db_xref="InterPro:IPR007154" FT /db_xref="UniProtKB/TrEMBL:C5A3Y9" FT /inference="protein motif:CDD:DUF356, Protein of unknown FT function (DUF356)" FT /inference="protein motif:COG:COG1844 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF04009 DUF356 FT InterPro:IPR007154 Protein of unknown function DUF356" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32951.1" FT /translation="MRNTIVLVRTDNFQKASVALADLVRYGGMRIRGDPRIIPPALSDW FT AFEKISGEKPRKRFKAHVVAQIDLPPKKAIGRLMDIHPPAHILVIPPDSEVWEELMRLW FT GSFEKLKGFHPPKRTKAEELRRKAEKRREKEEWEFEEV" FT gene complement(443573..443911) FT /locus_tag="TGAM_0450" FT /note="tg0450" FT CDS complement(443573..443911) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0450" FT /product="Nucleotide binding protein, putative, containing FT PIN domain" FT /db_xref="InterPro:IPR002716" FT /db_xref="UniProtKB/TrEMBL:C5A3Z0" FT /inference="protein motif:COG:COG1848 Predicted nucleic FT acid-binding protein, contains PIN domain; R General FT function prediction only" FT /inference="protein motif:HMMPfam:PF01850 PIN FT InterPro:IPR002716 PilT protein, N-terminal" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /protein_id="ACS32952.1" FT /translation="MVPVINDIVFSEFLFHYIALKTGVSPFTIKKRGEIGKVILTEEPK FT DFLNQFHVLPTDDEVLEVSYGLIRKHNLLPNDAIILATCLVFEVRNFGTLDSDLKQAGE FT KEGLNVLP" FT gene complement(444004..444174) FT /locus_tag="TGAM_0451" FT /note="tg0451" FT CDS complement(444004..444174) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0451" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3Z1" FT /protein_id="ACS32953.1" FT /translation="MGEIVVKVPSGMERLIERKIKIILEREIRKGLSRAVLSKYLGKFK FT GDVNEEDWYLQ" FT gene complement(444210..445586) FT /locus_tag="TGAM_0452" FT /note="tg0452" FT CDS complement(444210..445586) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0452" FT /product="McrBC 5-methylcytosine restriction system FT component" FT /db_xref="InterPro:IPR019292" FT /db_xref="UniProtKB/TrEMBL:C5A3Z2" FT /inference="protein motif:CDD:McrC, McrBC 5-methylcytosine FT restriction system component [Defense mechanisms]" FT /inference="protein motif:COG:COG4268 McrBC FT 5-methylcytosine restriction system component; V Defense FT mechanisms" FT /inference="protein motif:superfamily:SSF52980 Restriction FT endonuclease-like" FT /protein_id="ACS32954.1" FT /translation="MPRLTTITLYEHDEKRYRDIAGDKKAIQDALIKLNKQFKKDFKKL FT DRSEDNSDTEDTIDESKGVVEVYANKIKARHYVGFAAVDNVFLQILPKVFKPKKEQTQE FT TQEDTWEPILAFIRMLDMAYGLKIKDHDLAYLQGRNLRPNLYEVFIYLFAKSLWSEVQR FT GYHREYVEVHREEKFLRGKLLMSRQIRKLPHQLNTFSVEVHELIEDNLLNRIFYASVRE FT ALRRTTWGLNRKLLGELMLAFDGITPIHLRTEHFERVHFTRLNERFRRPFELAKLLFMP FT ASGKGRSREVSGFFVDMNKLFERFIERVLVRNLPPEYKLFYQESYPFLKNQNGSSQKPD FT YVVRKGNTPVVVLDAKYRELKERIPSSDMLRQLYVYSRIWGYKTSHENDSKPPAVIVIP FT SSSTYNQGLPDKPLEFEFFDERKLFIVAYNMDYVKTGAIFKADKNFRRSLNNIIGKLNT FT " FT gene complement(445592..447433) FT /locus_tag="TGAM_0453" FT /note="tg0453" FT CDS complement(445592..447433) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0453" FT /product="GTPase subunit of restriction endonuclease" FT /db_xref="GOA:C5A3Z3" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011704" FT /db_xref="UniProtKB/TrEMBL:C5A3Z3" FT /inference="protein motif:COG:COG1401 GTPase subunit of FT restriction endonuclease; V Defense mechanisms" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR11603 AAA-FAMILY FT ATPASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11603:SF52 CELL FT DIVISION CYCLE PROTEIN 48" FT /inference="protein motif:HMMPfam:PF07728 AAA_5 FT InterPro:IPR011704 ATPase associated with various cellular FT activities, AAA-5 GO:Molecular Function:ATP binding FT (GO:0005524), Molecular Function:ATPase activity FT (GO:0016887)" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32955.1" FT /translation="MENQLFIIGIGTGTDEYENFEETILKGVKRNELEGQIGPDILDNC FT CSDVCYFWGRSKETIYEKKIDKGDMVLFYVGKRISRNKVDLNQETAVYLGIICETVEIS FT ENDVSFLNDFWRKGENFRFLMFFKKKPEKLHHSINEINSKLGYNPDYFPIAGYVKPERM FT SGVYDILKNILKKRGILKESDSMNESAGHNIKEDYFRVDMLLNKKGQVILYGPPGTGKT FT WIARKYVVEETNEKTPGNKWEFITFHQSYSYEEFIEGFRPRTDNEEKIRYVVEDGIFKK FT IALRALVKGLFELEDATIGKDKIHRLYILLTKKEPLSPTEYEEYLRLKRYLWELVGGLP FT KDKLKNLTPKFYLIIDEINRGNISKIFGELITLLEKDKRLGGENQLIVRLPYSGEPFAV FT PPNLYIIGTMNTADRSIALLDVALRRRFAFIEVEPRPEFLEKENLKKIREKKLKTEDRK FT RLNEKLNELFSKLGNDNYFLKTLLEKINVRITVVKDRDHRIGHSYFLNVETVEDLHHVW FT YYEVLPLLMEYFYNDWETIKWVLNEKGKEHGNVFFEKLRLTGPNGEEAYQLKVLEGDAF FT IGALKRIISKNTPSQEGGATTNEENSPENTQSQTEGD" FT gene complement(447476..448018) FT /locus_tag="TGAM_0454" FT /note="tg0454" FT CDS complement(447476..448018) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0454" FT /product="Transcription regulator, putative, DNA binding FT helix-turn helix protein" FT /db_xref="GOA:C5A3Z4" FT /db_xref="InterPro:IPR001387" FT /db_xref="InterPro:IPR004451" FT /db_xref="InterPro:IPR010982" FT /db_xref="UniProtKB/TrEMBL:C5A3Z4" FT /inference="protein motif:CDD:COG1813, Predicted FT transcription factor, homolog of eukaryotic MBF1 FT [Transcription]" FT /inference="protein motif:COG:COG1813 Predicted FT transcription factor, homolog of eukaryotic MBF1; K FT Transcription" FT /inference="protein motif:HMMPfam:PF01381 HTH_3 FT InterPro:IPR001387 Helix-turn-helix type 3 GO:Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:HMMSmart:SM00530 no description FT InterPro:IPR001387 Helix-turn-helix type 3 GO:Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:ProfileScan:PS50943 HTH_CROC1 FT InterPro:IPR001387 Helix-turn-helix type 3 GO:Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:superfamily:SSF47413 lambda FT repressor-like DNA-binding domains InterPro:IPR010982 FT Lambda repressor-like, DNA-binding" FT /inference="protein motif:superfamily:SSF57716 FT Glucocorticoid receptor-like (DNA-binding domain)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32956.1" FT /translation="MVAMSKAKPRYCEICGAPIRGPGHRIRLEGAEVLVCDRCYEKYGR FT KKSGFSIMPTGREPRRRPVSAPRPKREPKPYRERPLYTEEIVEDFAERVYRAIQRSGKS FT YEELSHEIGLSVNDLRAIAHGYREPTIKEAKKLERYFKITLIERVEEEFKEKKTIPKDY FT EPTLGDIANIRIRKRKK" FT gene 447996..448550 FT /locus_tag="TGAM_0455" FT /note="tg0455" FT CDS 447996..448550 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0455" FT /product="N-acetyltransferase" FT /db_xref="GOA:C5A3Z5" FT /db_xref="InterPro:IPR000182" FT /db_xref="InterPro:IPR016181" FT /db_xref="UniProtKB/TrEMBL:C5A3Z5" FT /inference="protein motif:CDD:Acetyltransf_1, FT Acetyltransferase (GNAT) family" FT /inference="protein motif:CDD:RimI, Acetyltransferases FT [General function prediction only]" FT /inference="protein motif:COG:COG0454 Histone FT acetyltransferase HPA2 and related acetyltransferases; K FT Transcription" FT /inference="protein motif:Gene3D:G3D.3.40.630.30 no FT description" FT /inference="protein motif:HMMPanther:PTHR10216 FT N-ACETYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00583 Acetyltransf_1 FT InterPro:IPR000182 GCN5-related N-acetyltransferase FT GO:Molecular Function:N-acetyltransferase activity FT (GO:0008080)" FT /inference="protein motif:superfamily:SSF55729 Acyl-CoA FT N-acyltransferases (Nat)" FT /protein_id="ACS32957.1" FT /translation="MALLIATTFSTAQSSESGFLNPTMRISMMTKVKIEKLQKLDQETL FT ERLIEIYMNAYEGMREYGGEGESYAKRYLRWCWSKAKDGFFVAKIGDKIVGFIVCDDDW FT YSRYEGRTVGAIHEFAVDKSYQGHGIGRKLMEKCLEYLGGKDIELWVGEKNERAKRFYE FT EYGFREVGKHGIWVRMVRRKR" FT gene 448579..448878 FT /locus_tag="TGAM_0456" FT /note="tg0456" FT CDS 448579..448878 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0456" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3Z6" FT /protein_id="ACS32958.1" FT /translation="MVAMPCIHPPSPDKVRNMKEESFIREGKGKLKVTIEGSETLETTM FT SGRLKSVEEVAEMLGVEAKNGKIDAVVDGVKVRMEKGKLELEFESGDRMRIERA" FT gene complement(448875..449264) FT /locus_tag="TGAM_0457" FT /note="tg0457" FT CDS complement(448875..449264) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0457" FT /product="Nucleotide binding protein, putative, containing FT PIN domain" FT /db_xref="GOA:C5A3Z7" FT /db_xref="InterPro:IPR002716" FT /db_xref="InterPro:IPR006596" FT /db_xref="InterPro:IPR022907" FT /db_xref="UniProtKB/TrEMBL:C5A3Z7" FT /inference="protein motif:HMMPfam:PF01850 PIN FT InterPro:IPR002716 PilT protein, N-terminal" FT /inference="protein motif:HMMSmart:SM00670 no description FT InterPro:IPR006596 Nucleotide binding protein, PINc" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32959.1" FT /translation="MIVIPDTSALVELIKGTEKGKAVLEILNESELVIIPTLVLAELSS FT FLERNGVDLSIVKTIADMGLVVPLDKEVAINAGKLHAEIRRKNKNKHVSLADCIISKTA FT KRYGALVVTTDYHFRLLGDAIIIES" FT gene complement(449261..449425) FT /locus_tag="TGAM_0458" FT /note="tg0458" FT CDS complement(449261..449425) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0458" FT /product="Hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A3Z8" FT /protein_id="ACS32960.1" FT /translation="MGEDMTIEVKVPISGDELKRLLEGRGRKKNWEKLFGIAKELPEFR FT EEDRVDVRI" FT gene complement(449462..449866) FT /locus_tag="TGAM_0459" FT /note="tg0459" FT CDS complement(449462..449866) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0459" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF35 family" FT /db_xref="InterPro:IPR002878" FT /db_xref="InterPro:IPR022002" FT /db_xref="UniProtKB/TrEMBL:C5A3Z9" FT /inference="protein motif:BlastProDom:PD003834 FT Q9UYY6_PYRAB_Q9UYY6; InterPro:IPR002878 Protein of unknown FT function DUF35" FT /inference="protein motif:CDD:DUF35, Domain of unknown FT function DUF35" FT /inference="protein motif:COG:COG1545 Predicted FT nucleic-acid-binding protein containing a Zn-ribbon; R FT General function prediction only" FT /inference="protein motif:HMMPfam:PF01796 DUF35 FT InterPro:IPR002878 Protein of unknown function DUF35" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32961.1" FT /translation="MARPMQISRYWRHFREKYRLIGGKCENGHVFFPYRSVCPVCGSRN FT VEEYEFSGKGKVLTWTIVRNPPSGFEYYKPYPLALVQLEEGPVVLAQLTDVEPEEIHEG FT MEVEAVTRKVREFEEDGIILYAYKFRPVLK" FT gene complement(449869..451038) FT /locus_tag="TGAM_0460" FT /note="tg0460" FT CDS complement(449869..451038) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0460" FT /product="Acetyl-CoA C-acetyltransferase" FT /db_xref="GOA:C5A400" FT /db_xref="InterPro:IPR002155" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR020616" FT /db_xref="InterPro:IPR020617" FT /db_xref="UniProtKB/TrEMBL:C5A400" FT /inference="protein motif:CDD:nondecarbox_cond_enzymes, FT nondecarboxylating condensing enzymes" FT /inference="protein motif:CDD:PaaJ, Acetyl-CoA FT acetyltransferase [Lipid metabolism]" FT /inference="protein motif:CDD:SCP-x_thiolase, Thiolase FT domain associated with sterol carrier protein (SCP)-x FT isoform and related proteins" FT /inference="protein motif:CDD:thiolase, Thiolase are FT ubiquitous enzymes that catalyze the reversible thiolytic FT cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a FT 2-step reaction involving a covalent intermediate formed FT with a catalytic cysteine" FT /inference="protein motif:CDD:Thiolase_N, Thiolase, FT N-terminal domain" FT /inference="protein motif:COG:COG0183 Acetyl-CoA FT acetyltransferase; I Lipid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.47.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR18919 ACETYL-COA FT C-ACYLTRANSFERASE InterPro:IPR002155 Thiolase" FT /inference="protein motif:HMMPanther:PTHR18919:SF8 FT ACETYL-COA C-ACYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00108 Thiolase_N FT InterPro:IPR002155 Thiolase" FT /inference="protein motif:HMMPfam:PF02803 Thiolase_C FT InterPro:IPR002155 Thiolase" FT /inference="protein motif:HMMPIR:PIRSF000429 Acetyl-CoA FT acetyltransferase" FT /inference="protein motif:superfamily:SSF53901 FT Thiolase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32962.1" FT /translation="MVEMRKAVIIGAGMTPVGEHWKLALRDLAVEALLNAMEDAGVDKV FT DSLYVGNMASGSFVEQENLGALIADWAGLGNIPAVKIEAACASGGAAVQEGVKAVLSGL FT EDVVAVVGVEKMTDAWPSDATRYLAYAADAEWELFHGASFVALNALIMRHYMKTYGYTE FT EDLALFAVNAHANGAKNPYAMFKKPIKVETVLKSPYIADPLKLFDASPVCDGAAAVIIT FT TPEKAKELGVPKEKWVEVAGMARAIDTINLANREDLLTLKAAKIAAEKAYKMAGVEPKD FT IDFFEVHDAFTIMAALSLEALGVAKKGEGAKLAREGQIAIDGDYPIQTMGGLKSRGHPV FT GATGVYQTVEAVLQLRGEAPNQVPDAEVGLTQNIGGTGSNITVNILRRV" FT gene complement(451040..452092) FT /locus_tag="TGAM_0461" FT /note="tg0461" FT CDS complement(451040..452092) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0461" FT /product="3-hydroxy-3-methylglutaryl CoA synthase" FT /EC_number="2.3.3.10" FT /db_xref="GOA:C5A401" FT /db_xref="InterPro:IPR004656" FT /db_xref="InterPro:IPR013747" FT /db_xref="InterPro:IPR013751" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="UniProtKB/Swiss-Prot:C5A401" FT /inference="protein motif:CDD:FabH, FT 3-oxoacyl-[acyl-carrier-protein]" FT /inference="protein motif:CDD:HMG_CoA_synt, FT Hydroxymethylglutaryl-coenzyme A synthase" FT /inference="protein motif:CDD:init_cond_enzymes, FT 'initiating' condensing enzymes are a subclass of FT decarboxylating condensing enzymes, including beta-ketoacyl FT [ACP] synthase, type III and polyketide synthases, type FT III, which include chalcone synthase and related enzymes" FT /inference="protein motif:CDD:KAS_III, Ketoacyl-acyl FT carrier protein synthase III (KASIII) initiates the FT elongation in type II fatty acid synthase systems" FT /inference="protein motif:CDD:PksG, FT 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]" FT /inference="protein motif:COG:COG3425 FT 3-hydroxy-3-methylglutaryl CoA synthase; I Lipid transport FT and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.47.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11877 FT HYDROXYMETHYLGLUTARYL-COA SYNTHASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11877:SF2 ACYL FT CARRIER PROTEIN SYNTHASE-RELATED" FT /inference="protein motif:HMMPfam:PF01154 HMG_CoA_synt_N FT InterPro:IPR013528 Hydroxymethylglutaryl-coenzyme A FT synthase, N-terminal" FT /inference="protein motif:HMMPfam:PF08541 ACP_syn_III_C FT InterPro:IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] FT synthase III C terminal" FT /inference="protein motif:HMMPIR:PIRSF001368 FT 3-hydroxy-3-methylglutaryl CoA synthase InterPro:IPR008260 FT Hydroxymethylglutaryl-coenzyme A synthase GO:Molecular FT Function:hydroxymethylglutaryl-CoA synthase activity FT (GO:0004421), Biological Process:acetyl-CoA metabolism FT (GO:0006084)" FT /inference="protein motif:HMMTigr:TIGR00748 FT HMG_CoA_syn_Arc:hydroxymethylglutary InterPro:IPR004656 FT Putative condensing enzyme FabH-related" FT /inference="protein motif:superfamily:SSF53901 FT Thiolase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32963.1" FT /translation="MRKLLKPKREVGIVGYGAYVPMYRIKAEEIGRVWGVSSFPIEEKA FT VPGLDEDALTIGLEAARNALKRAGIDPKLIRAVWFGSESKPYAVKPTGTVIAEAIGATP FT DVSTADFEFACKAGTEALQTAIGFVGSEMADYAMAIGADTAQGRPGDHLEFTAGAGGAA FT FIVGPKSSETVAYFEGSYSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHIINAAKTL FT MEELGLTVNDFDYAVFHQPNVKFPLTVAKILGIPKEKVLPGLLSGTIGNTYSGATMVGV FT SAVLDIAKPGDRILWVSFGSGAGSDAFSVVVQDAIEEKRNLAPKVKDYVERKKYIDYAL FT YAKARRKYIL" FT gene 452241..452909 FT /locus_tag="TGAM_0462" FT /note="tg0462" FT CDS 452241..452909 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0462" FT /product="Conserved hypothetical protein" FT /note="Contains DUF124 domain" FT /db_xref="InterPro:IPR002838" FT /db_xref="InterPro:IPR016031" FT /db_xref="UniProtKB/TrEMBL:C5A402" FT /inference="protein motif:BlastProDom:PD013634 FT Q9V255_PYRAB_Q9V255; InterPro:IPR002838 Protein of unknown FT function DUF124" FT /inference="protein motif:CDD:DUF124, Protein of unknown FT function DUF124" FT /inference="protein motif:COG:COG2013 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01987 DUF124 FT InterPro:IPR002838 Protein of unknown function DUF124" FT /inference="protein motif:HMMTigr:TIGR00266 FT TIGR00266:conserved hypothetical protein T FT InterPro:IPR002838 Protein of unknown function DUF124" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32964.1" FT /translation="MKYEIKHRPSFSVLEVELNTGESIQAESGAMVYMSPTIKLETKAK FT GGIFGALKRSMLGGESFFINTFRAEGGPGTVGLAPPYPGDIEAFELDGTLYAQSGAFLA FT SSGEIDIDTKWGGAKTFFGREGLFLLKMSGRGTVFLSSFGAIVRKELHNERFIIDTGHL FT VAFSEGLDFTVKRVGGLKSTLLSGEGLVAEFYGTGTLYIQTRSMDGFLSWIIPHLPKRG FT " FT gene complement(452965..453645) FT /gene="flpA" FT /locus_tag="TGAM_0463" FT /note="tg0463" FT CDS complement(452965..453645) FT /codon_start=1 FT /transl_table=11 FT /gene="flpA" FT /locus_tag="TGAM_0463" FT /product="Fibrillarin pre-rRNA splicing protein (flpA)" FT /db_xref="GOA:C5A403" FT /db_xref="InterPro:IPR000692" FT /db_xref="InterPro:IPR020813" FT /db_xref="UniProtKB/Swiss-Prot:C5A403" FT /inference="protein motif:BlastProDom:PD004637 FT FLPA_PYRHO_O57811; InterPro:IPR000692 Fibrillarin FT GO:Molecular Function:RNA binding (GO:0003723), Cellular FT Component:nucleus (GO:0005634), Biological Process:rRNA FT processing (GO:0006364)" FT /inference="protein motif:CDD:Fibrillarin, Fibrillarin" FT /inference="protein motif:CDD:NOP1, Fibrillarin-like rRNA FT methylase [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:COG:COG1889 Fibrillarin-like rRNA FT methylase; J Translation, ribosomal structure and FT biogenesis" FT /inference="protein motif:FPrintScan:PR00052 FIBRILLARIN FT InterPro:IPR000692 Fibrillarin GO:Molecular Function:RNA FT binding (GO:0003723), Cellular Component:nucleus FT (GO:0005634), Biological Process:rRNA processing FT (GO:0006364)" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR10335 FIBRILLARIN FT InterPro:IPR000692 Fibrillarin GO:Molecular Function:RNA FT binding (GO:0003723), Cellular Component:nucleus FT (GO:0005634), Biological Process:rRNA processing FT (GO:0006364)" FT /inference="protein motif:HMMPanther:PTHR10335:SF1 FT FIBRILLARIN" FT /inference="protein motif:HMMPfam:PF01269 Fibrillarin FT InterPro:IPR000692 Fibrillarin GO:Molecular Function:RNA FT binding (GO:0003723), Cellular Component:nucleus FT (GO:0005634), Biological Process:rRNA processing FT (GO:0006364)" FT /inference="protein motif:ScanRegExp:PS00566 FIBRILLARIN FT InterPro:IPR000692 Fibrillarin GO:Molecular Function:RNA FT binding (GO:0003723), Cellular Component:nucleus FT (GO:0005634), Biological Process:rRNA processing FT (GO:0006364)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32965.1" FT /translation="MKVKKHRFPGVYIVIDDDGSEKIATKNLVPGQRVYGERVIKFEGE FT EYRIWNPSRSKLGAAILNGLKNFPIKPGSTVLYLGIASGTTASHVSDIVGWEGKIFGVE FT FSPRVLRELVPIVEERRNIVPILGDATKPEGYRALVPKVDVIFEDVAQPTQAKILIDNA FT KVFLKSGGYGMISVKSRSIDVTKEPEEVFKEVERELASYFEVVERLSLEPYEKDHALFV FT VRKP" FT gene complement(453651..454919) FT /locus_tag="TGAM_0464" FT /note="tg0464" FT CDS complement(453651..454919) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0464" FT /product="pre-mRNA splicing, snoRNA binding protein, FT NOP5/NOP56 related" FT /db_xref="InterPro:IPR002687" FT /db_xref="InterPro:IPR012976" FT /db_xref="UniProtKB/TrEMBL:C5A404" FT /inference="protein motif:BlastProDom:PD004104 FT O57810_PYRHO_O57810; InterPro:IPR002687 Pre-mRNA processing FT ribonucleoprotein, binding region" FT /inference="protein motif:CDD:Nop, Putative snoRNA binding FT domain" FT /inference="protein motif:CDD:SIK1, Protein implicated in FT ribosomal biogenesis, Nop56p homolog [Translation, FT ribosomal structure and biogenesis]" FT /inference="protein motif:COG:COG1498 Protein implicated in FT ribosomal biogenesis, Nop56p homolog; J Translation, FT ribosomal structure and biogenesis" FT /inference="protein motif:HMMPanther:PTHR10894 NUCLEOLAR FT PROTEIN NOP56-RELATED" FT /inference="protein motif:HMMPanther:PTHR10894:SF1 FT NUCLEOLAR PROTEIN NOP56-RELATED" FT /inference="protein motif:HMMPfam:PF01798 Nop FT InterPro:IPR002687 Pre-mRNA processing ribonucleoprotein, FT binding region" FT /inference="protein motif:HMMPfam:PF08060 NOSIC FT InterPro:IPR012976 NOSIC" FT /inference="protein motif:superfamily:SSF89124 Nop domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32966.1" FT /translation="MRVYIAENVRGVYAFDESGKLIASKPFSGKPETSLDRLLKGEPSD FT ELSALLDELKGEGYEEFIVEDTELSRKLKELGYNATAEFPNLAGEKLRSSPEEFLGENW FT FDEYYTVGVALTRLRIQEQSGARDKMIIQAIEALDDIDKVINLLVSRLREWYGLHFPEL FT DEILPKHPQYVTFVKEIGPRENVSREKLEKLGFSEGKIKKILKAAEKSMGAPLGKFDSE FT IIRKLASEISDLYKLREQIEDYLETAMDEVAPNLKALVGAKLAARLMSLAGGLKELAMM FT PASTIQVLGAEKALFRHLRTGAKPPKHGVIFQYPAINRSPWWQRGKIARALAGKLAIAA FT RVDYFSGEYIGEELKKELEQRIKEIKEKYPNPPKRKAKPEKKKKKKFKGKEKKGKKHEK FT GRKEKKGKGKPDKKGKKKKKGKR" FT gene 455018..456085 FT /locus_tag="TGAM_0465" FT /note="tg0465" FT CDS 455018..456085 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0465" FT /product="RNA-binding protein, putative" FT /note="Contains THUMP domain" FT /db_xref="InterPro:IPR004114" FT /db_xref="UniProtKB/TrEMBL:C5A405" FT /inference="protein motif:CDD:ThiI, Thiamine biosynthesis FT ATP pyrophosphatase [Coenzyme metabolism]" FT /inference="protein motif:CDD:THUMP, THUMP domain" FT /inference="protein motif:COG:COG1818 Predicted RNA-binding FT protein, contains THUMP domain; R General function FT prediction only" FT /inference="protein motif:HMMPfam:PF02926 THUMP FT InterPro:IPR004114 THUMP" FT /inference="protein motif:superfamily:SSF75217 alpha/beta FT knot" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32967.1" FT /translation="MGAGRKFIVKTQRGMESVAANYISELLPKAEVWASPMGYSGLVLV FT ESSDEDALEKILQIPEVERVIPVIVETEASLEKIAESAEKLADFIDENETYAVKTKRRG FT KHDFSSIDVNRVLGAKIKELTNADVNLSWPDKVVQVEIIGDRAYISVIPGEEFRKYTPD FT KIDARKLFKKLTIVQMPYWGDYKACRLFGEKIGRAAQAFEVKELIIAPKERMDAYELME FT FIRGVKIGQESRYQIQRDAYPWNVEKVPVTVWDLYQVVRDKRRKKRLLIITDPKGPTLA FT EVKDKLAKDLHYAKEVVVFIGSREGIPKGLFRFADYVVDLAPYMTFATEHGIPAALVSL FT WEVYEEFLRGGEKGE" FT gene complement(456139..456864) FT /locus_tag="TGAM_0466" FT /note="tg0466" FT CDS complement(456139..456864) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0466" FT /product="Integral membrane protein" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A406" FT /db_xref="InterPro:IPR002794" FT /db_xref="UniProtKB/TrEMBL:C5A406" FT /inference="protein motif:BlastProDom:PD014594 FT Q8TZQ7_PYRFU_Q8TZQ7; InterPro:IPR002794 Protein of unknown FT function DUF92, transmembrane" FT /inference="protein motif:CDD:COG1836, Predicted membrane FT protein [Function unknown]" FT /inference="protein motif:CDD:DUF92, Integral membrane FT protein DUF92" FT /inference="protein motif:COG:COG1836 Predicted membrane FT protein; S Function unknown" FT /inference="protein motif:HMMPanther:PTHR13353 FAMILY NOT FT NAMED InterPro:IPR002794 Protein of unknown function DUF92, FT transmembrane" FT /inference="protein motif:HMMPfam:PF01940 DUF92 FT InterPro:IPR002794 Protein of unknown function DUF92, FT transmembrane" FT /protein_id="ACS32968.1" FT /translation="MHDPSFTTLIIGLIVPLLGVIAYRAKALDLAGTLASVLLGILVIY FT LGGVYTFLALLVFLVFGTATTKYRFNEKVKKGFSSIEERTRSVGNVLGNGLAVVVFLIV FT EAITRQDVFWAATFSAIATVNGDTLASELGKVYGKRPRLITNLKPVKPGTNGGISLAGE FT LFALLGVLVIVPFALPLTKYDLTMTLAVLTGGFLGINADSFIGATLENKGLLDNNGTNF FT LASLIGGLIGALVFYTLGG" FT gene complement(456967..457422) FT /locus_tag="TGAM_0467" FT /note="tg0467" FT CDS complement(456967..457422) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0467" FT /product="Transcription regulator protein, Lrp-Asn family" FT /db_xref="GOA:C5A407" FT /db_xref="InterPro:IPR000485" FT /db_xref="InterPro:IPR000835" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR019887" FT /db_xref="InterPro:IPR019888" FT /db_xref="UniProtKB/TrEMBL:C5A407" FT /inference="protein motif:CDD:HTH_ASNC, helix_turn_helix FT ASNC type; AsnC:an autogenously regulated activator of FT asparagine synthetase A transcription in Escherichia coli)" FT /inference="protein motif:CDD:Lrp, Transcriptional FT regulators [Transcription]" FT /inference="protein motif:COG:COG1522 Transcriptional FT regulators; K Transcription" FT /inference="protein motif:FPrintScan:PR00033 HTHASNC FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMPfam:PF01022 HTH_5 FT InterPro:IPR001845 Bacterial regulatory protein, ArsR FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:HMMPfam:PF01037 AsnC_trans_reg FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:HMMSmart:SM00344 no description FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:ProfileScan:PS50956 HTH_ASNC_2 FT InterPro:IPR000485 Bacterial regulatory proteins, AsnC/Lrp FT GO:Molecular Function:transcription factor activity FT (GO:0003700), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:sequence-specific DNA binding (GO:0043565)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /inference="protein motif:superfamily:SSF54909 Dimeric FT alpha+beta barrel InterPro:IPR011008 Dimeric alpha-beta FT barrel" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32969.1" FT /translation="MPRKVKIDSIDLRIVHLLSENARMTYKELAEAIGTTRQRISRRMD FT KLERMGIIQKYTILPDYESLGYSYIILGITLKPGAKTDSIIQNLKEKEYVKIIQKALGT FT HNLVVHVIAPKDMREIQSIIESITSDIEDIDHVDITFITETCKFQTF" FT gene complement(457681..459594) FT /locus_tag="TGAM_0468" FT /note="tg0468" FT CDS complement(457681..459594) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0468" FT /product="ATP-dependent protease, archaeal Lon-like FT protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A408" FT /db_xref="InterPro:IPR000523" FT /db_xref="InterPro:IPR002078" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004663" FT /db_xref="InterPro:IPR008269" FT /db_xref="InterPro:IPR020568" FT /db_xref="UniProtKB/TrEMBL:C5A408" FT /inference="protein motif:COG:COG1067 Predicted FT ATP-dependent protease; O Posttranslational modification, FT protein turnover, chaperones" FT /inference="protein motif:FPrintScan:PR00830 ENDOLAPTASE FT InterPro:IPR001984 Peptidase S16, lon protease GO:Molecular FT Function:ATP-dependent peptidase activity (GO:0004176), FT Molecular Function:serine-type endopeptidase activity FT (GO:0004252), Biological Process:proteolysis (GO:0006508)" FT /inference="protein motif:Gene3D:G3D.1.10.8.60 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR10046 ATP FT DEPENDENT LON PROTEASE FAMILY MEMBER" FT /inference="protein motif:HMMPanther:PTHR10046:SF2 FT ATP-DEPENDENT PROTEASE LA" FT /inference="protein motif:HMMPfam:PF05362 Lon_C FT InterPro:IPR008269 Peptidase S16, lon C-terminal FT GO:Molecular Function:ATP-dependent peptidase activity FT (GO:0004176), Molecular Function:serine-type endopeptidase FT activity (GO:0004252), Biological Process:proteolysis FT (GO:0006508)" FT /inference="protein motif:HMMPfam:PF07728 AAA_5 FT InterPro:IPR011704 ATPase associated with various cellular FT activities, AAA-5 GO:Molecular Function:ATP binding FT (GO:0005524), Molecular Function:ATPase activity FT (GO:0016887)" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:HMMTigr:TIGR00764 FT lon_rel:ATP-dependent protease, putative InterPro:IPR004663 FT Peptidase S16, archaeal lon homologs GO:Molecular FT Function:ATP-dependent peptidase activity (GO:0004176), FT Molecular Function:ATP binding (GO:0005524), Biological FT Process:protein catabolism (GO:0030163)" FT /inference="protein motif:ProfileScan:PS50045 FT SIGMA54_INTERACT_4 InterPro:IPR002078 Sigma-54 factor, FT interaction region GO:Molecular Function:ATP binding FT (GO:0005524), Cellular Component:intracellular FT (GO:0005622), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355), Molecular FT Function:transcription factor binding (GO:0008134)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32970.1" FT /translation="MPEAEKGMLMGEERTLQTGETLDLGIEFETTEEIKVPERLIDQVI FT GQEHAVEVIKTAAGQRRHVLLIGEPGTGKSMLGQAMAELLPTENLEDILVFPNPEDENM FT PKIKTVPACQGRRIVQKYREKAKNQENIKSYLLLAIVFMVMMAVMMQYSTQNFLMGLFV FT IILTIMVLSNMRLKTSVLVPKLLVDNCGRTKAPFVDATGAHAGALLGDVRHDPFQSGGL FT GTPAHERVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSELSSGAM FT VRTEPVPCDFILVAAGNLDTVDKMHPALRSRIRGYGYEVYMRTTMPDTIENRRKLVQFV FT AQEVKRDGKIPHFTREAVEEIVREAQKRAGRKGHLTLRLRDLGGIVRAAGDIAVKKGKK FT YVEREDVLEAMKMAKPLEKQLADWYIENKKEYQVIKTEGGEIGRVNGLAVIGEQSGIVL FT PIEAVVAPAASKEEGKIIVTGKLGEIAKEAIQNVSAIIKRYKGEDISRYDIHVQFLQTY FT EGVEGDSASISVATAVISALEDIPIRQDVAMTGSLSVRGEVLPIGGATPKIEAAIEAGI FT KTVIIPKANEKDVFLSPDKAKKIRIIPVETIDEVLEIALEDSEKKRELLSRIRSALPLH FT KS" FT gene 459680..460471 FT /locus_tag="TGAM_0469" FT /note="tg0469" FT CDS 459680..460471 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0469" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR022620" FT /db_xref="UniProtKB/TrEMBL:C5A409" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32971.1" FT /translation="MPRSVEDHVMFTAKHGNWKVADKLIDVEDEKIARFLARVGNTVNS FT KIPEYLTDVMNVAGIMSLAEGIDGDLTKVIVSLKSPGISRKLGALVFEEDKKLKKLLVD FT AARALLVRLTLSRFVPVDYPDGLLKEVRVVFPFPDDHVNFTAKHGSWIVVKRLIIDDST FT PKVDVARLLASINETVTLKLPAYAGIDVNGIEEWFGPRKKVKKSEIPSIVERYLNFQPS FT EFAPGFEEHARVYALRIALERIGLSLDVPAKSLEKYLEKKP" FT gene 460468..460911 FT /locus_tag="TGAM_0470" FT /note="tg0470" FT CDS 460468..460911 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0470" FT /product="Endoribonuclease L-PSP, YjgF-like protein" FT /db_xref="InterPro:IPR006056" FT /db_xref="InterPro:IPR006175" FT /db_xref="InterPro:IPR013813" FT /db_xref="InterPro:IPR019897" FT /db_xref="UniProtKB/TrEMBL:C5A410" FT /inference="protein motif:CDD:Ribonuc_L-PSP, FT Endoribonuclease L-PSP" FT /inference="protein motif:CDD:TdcF, Putative translation FT initiation inhibitor, yjgF family [Translation, ribosomal FT structure and biogenesis]" FT /inference="protein motif:CDD:YjgF_like, YjgF, YER057c, and FT UK114 belong to a large family of proteins present in FT bacteria, archaea, and eukaryotes with no definitive FT function" FT /inference="protein motif:CDD:YjgF_like1, YjgF_like1 belong FT to a large family of proteins present in bacteria, archaea, FT and eukaryotes with no definitive function" FT /inference="protein motif:CDD:YjgH, YjgH belong to a large FT family of proteins present in bacteria, archaea, and FT eukaryotes with no definitive function" FT /inference="protein motif:COG:COG0251 Putative translation FT initiation inhibitor, yjgF family; J Translation, ribosomal FT structure and biogenesis" FT /inference="protein motif:Gene3D:G3D.3.30.70.130 no FT description" FT /inference="protein motif:HMMPanther:PTHR11803 TRANSLATION FT INITIATION INHIBITOR-RELATED" FT /inference="protein motif:HMMPanther:PTHR11803:SF3 FT TRANSLATION INITIATION INHIBITOR-RELATED" FT /inference="protein motif:HMMPfam:PF01042 Ribonuc_L-PSP FT InterPro:IPR006175 Endoribonuclease L-PSP" FT /inference="protein motif:HMMTigr:TIGR00004 FT TIGR00004:endoribonuclease L-PSP, putative FT InterPro:IPR006056 YjgF-like protein" FT /inference="protein motif:ScanRegExp:PS01094 UPF0076 FT InterPro:IPR006056 YjgF-like protein" FT /inference="protein motif:superfamily:SSF55298 YjgF-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32972.1" FT /translation="MMRPRTPDERMRSLRFAEVNEMDREFVFPEGVSPIGPYSPGVIAS FT GRLLFVSGQIPLDPETGELVRGTFRDMARRAIENLLSVVEAAGGSVENVVKVTVYLRDI FT SKYEEFNEVYSEFFASSKPARAVVEVSNLPKGVDVEIEAIAVL" FT gene 460936..461310 FT /locus_tag="TGAM_0471" FT /note="tg0471" FT CDS 460936..461310 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0471" FT /product="Metal-dependant protease, putative" FT /note="Belongs to Mov34/MPN/PAD-1 family Contains Jab1/MPN FT domain" FT /db_xref="GOA:C5A411" FT /db_xref="UniProtKB/TrEMBL:C5A411" FT /inference="protein motif:CDD:COG1310, Predicted FT metal-dependent protease of the PAD1/JAB1 superfamily FT [General function prediction only]" FT /inference="protein motif:COG:COG1310 Predicted FT metal-dependent protease of the PAD1/JAB1 superfamily; R FT General function prediction only" FT /inference="protein motif:HMMPfam:PF01398.10 FT Mov34/MPN/PAD-1 family InterPro:Mov34/MPN/PAD-1" FT /protein_id="ACS32973.1" FT /translation="MVEKVRIREELLKYLLELARSFYPNEFAGFLREKDGIFEEVLIAP FT AGHFGRTSVFFNAWMLPLDESVRGTVHSHPDSVCLPSRQDLWFFSKFGGVHLILCYPFT FT PSDVKAFLSSGETVEIEIVP" FT gene 461361..461786 FT /locus_tag="TGAM_0472" FT /note="tg0472" FT CDS 461361..461786 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0472" FT /product="Iron dependent transcription repressor" FT /note="Contains HTH_DTXR domain" FT /db_xref="GOA:C5A412" FT /db_xref="InterPro:IPR001367" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR022687" FT /db_xref="InterPro:IPR022689" FT /db_xref="UniProtKB/TrEMBL:C5A412" FT /inference="protein motif:CDD:HTH_DTXR, Helix-turn-helix FT diphteria tox regulatory element; iron dependent repressor" FT /inference="protein motif:CDD:TroR, Mn-dependent FT transcriptional regulator [Transcription]" FT /inference="protein motif:COG:COG1321 Mn-dependent FT transcriptional regulator; K Transcription" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:Gene3D:G3D.1.10.60.10 no FT description" FT /inference="protein motif:HMMPfam:PF01325 Fe_dep_repress FT InterPro:IPR001367 Iron dependent repressor GO:Molecular FT Function:transcription factor activity (GO:0003700), FT Molecular Function:iron ion binding (GO:0005506), FT Biological Process:regulation of transcription, FT DNA-dependent (GO:0006355)" FT /inference="protein motif:HMMPfam:PF02742 Fe_dep_repr_C FT InterPro:IPR001367 Iron dependent repressor GO:Molecular FT Function:transcription factor activity (GO:0003700), FT Molecular Function:iron ion binding (GO:0005506), FT Biological Process:regulation of transcription, FT DNA-dependent (GO:0006355)" FT /inference="protein motif:HMMSmart:SM00529 no description FT InterPro:IPR001367 Iron dependent repressor GO:Molecular FT Function:transcription factor activity (GO:0003700), FT Molecular Function:iron ion binding (GO:0005506), FT Biological Process:regulation of transcription, FT DNA-dependent (GO:0006355)" FT /inference="protein motif:ProfileScan:PS50944 HTH_DTXR FT InterPro:IPR001367 Iron dependent repressor GO:Molecular FT Function:transcription factor activity (GO:0003700), FT Molecular Function:iron ion binding (GO:0005506), FT Biological Process:regulation of transcription, FT DNA-dependent (GO:0006355)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /inference="protein motif:superfamily:SSF47979 FT Iron-dependent represor protein, dimerization domain FT InterPro:IPR001367 Iron dependent repressor GO:Molecular FT Function:transcription factor activity (GO:0003700), FT Molecular Function:iron ion binding (GO:0005506), FT Biological Process:regulation of transcription, FT DNA-dependent (GO:0006355)" FT /protein_id="ACS32974.1" FT /translation="MQVSKREEEYLETMYLLYKSKGIIRVKDIAKRMNVKPPSVIDALK FT KLSSKGLVEYEKYDRILLTEEGRKIAERTYAKHRFLTEFFVEILGIPPEIAEEDACQFE FT HYVHEETVRRMKEFAKFIREQCPYAIKQFVKEKLEEG" FT gene complement(461834..463162) FT /locus_tag="TGAM_0473" FT /note="tg0473" FT CDS complement(461834..463162) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0473" FT /product="Xanthine/uracil permease family protein" FT /note="13 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A413" FT /db_xref="InterPro:IPR006043" FT /db_xref="UniProtKB/TrEMBL:C5A413" FT /inference="protein motif:CDD:COG2252, Permeases [General FT function prediction only]" FT /inference="protein motif:CDD:SUL1, Sulfate permease and FT related transporters (MFS superfamily) [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:CDD:Xan_ur_permease, Permease FT family" FT /inference="protein motif:COG:COG2252 Permeases; R General FT function prediction only" FT /inference="protein motif:HMMPfam:PF00860 Xan_ur_permease FT InterPro:IPR006043 Xanthine/uracil/vitamin C permease FT GO:Molecular Function:transporter activity (GO:0005215), FT Biological Process:transport (GO:0006810), Cellular FT Component:membrane (GO:0016020)" FT /protein_id="ACS32975.1" FT /translation="MKALERYFEFDRYGTNMKTEVLAGITTFMTMAYILFVNPKILSVA FT MGSEAFNSLVAVTALAAGITTIIMGFYAKKPFALAPGMGLNAYFAYTVAPKYGWKVALA FT AVFVEGVIFIILSVTKVRSAIIHAIPLSQKYAVGAGIGLFLTFIGLNDMGLLTAATDNG FT VLLFTGLNASALTTKEGLLFFFGLFLAGILIALRVKGALLVSILTTSVVGWITGAANWP FT AHIFSTPDISYTFMKMDLQGLINVGALGVVFAFFMVDFFDTLGTVTGLSAKAGFLTKEG FT KVPDAEKVLLTDAIGTTFGAVLGTSTVTTYIESAAGIEEGGRTGMTAVVTGLLFLAIGL FT FIAPLAGAIPTFATAPALVIVGYYMLSAIKEVDFSDPTEAIPAFLVLITIPYTYSIANG FT IGMGFISYTLIKVFSGRWKEVHPLMYILSVVFLLYFAYLGGAF" FT gene 463384..463683 FT /gene="gar1" FT /locus_tag="TGAM_0474" FT /note="tg0474" FT CDS 463384..463683 FT /codon_start=1 FT /transl_table=11 FT /gene="gar1" FT /locus_tag="TGAM_0474" FT /product="Gar1-like small nucleolar rnp, putative (gar1)" FT /db_xref="GOA:C5A414" FT /db_xref="InterPro:IPR007504" FT /db_xref="InterPro:IPR009000" FT /db_xref="InterPro:IPR020321" FT /db_xref="UniProtKB/TrEMBL:C5A414" FT /inference="protein motif:CDD:GAR1, RNA-binding protein FT involved in rRNA processing [Translation, ribosomal FT structure and biogenesis]" FT /inference="protein motif:COG:COG3277 RNA-binding protein FT involved in rRNA processing; J Translation, ribosomal FT structure and biogenesis" FT /protein_id="ACS32976.1" FT /translation="MKRLGRVSHYAKQGFLIIRTNWVPSLNDRVVDKDLTFVGIIKDVF FT GPVKAPFVAVKPRVKKPESYVGSVLYVDNRNRKKGKETRPKKRRSRRPTPKRRG" FT gene 463690..464601 FT /gene="tfb-1" FT /locus_tag="TGAM_0475" FT /note="tg0475" FT CDS 463690..464601 FT /codon_start=1 FT /transl_table=11 FT /gene="tfb-1" FT /locus_tag="TGAM_0475" FT /product="Transcription initiation factor TFIIB (tfb)" FT /db_xref="GOA:C5A415" FT /db_xref="InterPro:IPR000812" FT /db_xref="InterPro:IPR013137" FT /db_xref="InterPro:IPR013150" FT /db_xref="InterPro:IPR013763" FT /db_xref="InterPro:IPR023484" FT /db_xref="InterPro:IPR023486" FT /db_xref="UniProtKB/TrEMBL:C5A415" FT /inference="protein motif:CDD:CYCLIN, Cyclin box fold" FT /inference="protein motif:CDD:SUA7, Transcription FT initiation factor TFIIIB, Brf1 subunit/Transcription FT initiation factor TFIIB [Transcription]" FT /inference="protein motif:CDD:TFIIB, Transcription factor FT TFIIB repeat" FT /inference="protein motif:COG:COG1405 Transcription FT initiation factor TFIIIB, Brf1 subunit/Transcription FT initiation factor TFIIB; K Transcription" FT /inference="protein motif:FPrintScan:PR00685 TIFACTORIIB FT InterPro:IPR000812 Transcription factor TFIIB related" FT /inference="protein motif:Gene3D:G3D.1.10.472.10 no FT description InterPro:IPR013763 Cyclin-related" FT /inference="protein motif:Gene3D:G3D.2.20.25.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11618 FT TRANSCRIPTION INITIATION FACTOR IIB InterPro:IPR000812 FT Transcription factor TFIIB related" FT /inference="protein motif:HMMPanther:PTHR11618:SF4 FT TRANSCRIPTION INITIATION FACTOR IIB" FT /inference="protein motif:HMMPfam:PF00382 TFIIB FT InterPro:IPR013150 Transcription factor TFIIB, FT cyclin-related" FT /inference="protein motif:HMMPfam:PF08271 TFIIB_Zn_Ribbon FT InterPro:IPR013137 Zinc finger, TFIIB-type" FT /inference="protein motif:HMMSmart:SM00385 no description FT InterPro:IPR006670 Cyclin" FT /inference="protein motif:ProfileScan:PS51134 ZF_TFIIB FT InterPro:IPR013137 Zinc finger, TFIIB-type" FT /inference="protein motif:ScanRegExp:PS00782 TFIIB FT InterPro:IPR000812 Transcription factor TFIIB related" FT /inference="protein motif:superfamily:SSF47954 Cyclin-like FT InterPro:IPR011028 Cyclin-like" FT /inference="protein motif:superfamily:SSF57783 Zinc FT beta-ribbon" FT /protein_id="ACS32977.1" FT /translation="MADKRVCPVCGSTEFFFDRTRGELVCRVCGYVLEENVVDEGPEWR FT AFDPDQRARRARTGAPMTLMIHDKGLSTDIDWRDKDIHGNQITGMYRSKLRRLRMWQRR FT MRINDAAERNLAFALSELDRMAAQMRLPRRVKEAAAALYRKAVMKKLIRGRSIEGMVSA FT ALYAACRMEGIPRTLDEIARVSKVTKKEIGRSYRFMARGLGLNLRPTSPIDYVDRFGDA FT LGVSSKTKQRAKEILQEAIKRGITSGKGPTGLAAAALYVASLLEGEKKTQREVAEVAHV FT TEVTVRNRYKELVEKLNIKVPM" FT gene 464613..465104 FT /locus_tag="TGAM_0476" FT /note="tg0476" FT CDS 464613..465104 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0476" FT /product="Metal-dependent phosphoesterase, putative" FT /db_xref="GOA:C5A416" FT /db_xref="InterPro:IPR000979" FT /db_xref="InterPro:IPR024654" FT /db_xref="UniProtKB/TrEMBL:C5A416" FT /inference="protein motif:CDD:COG0622, Predicted FT phosphoesterase [General function prediction only]" FT /inference="protein motif:COG:COG0622 Predicted FT phosphoesterase; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.60.21.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11124 VACUOLAR FT SORTING PROTEIN VPS29" FT /inference="protein motif:HMMPanther:PTHR11124:SF2 VACUOLAR FT SORTING PROTEIN VPS29-RELATED" FT /inference="protein motif:HMMPfam:PF00149 Metallophos FT InterPro:IPR004843 Metallophosphoesterase GO:Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:HMMPIR:PIRSF000886 Vacuolar FT protein sorting 29 (VPS29) InterPro:IPR000979 Protein of FT unknown function UPF0025 GO:Molecular Function:molecular FT function unknown (GO:0005554)" FT /inference="protein motif:HMMTigr:TIGR00040 FT yfcE:phosphodiesterase, MJ0936 family InterPro:IPR000979 FT Protein of unknown function UPF0025 GO:Molecular FT Function:molecular function unknown (GO:0005554)" FT /inference="protein motif:ProfileScan:PS50185 PHOSPHO_ESTER FT InterPro:IPR004843 Metallophosphoesterase GO:Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:superfamily:SSF56300 FT Metallo-dependent phosphatases" FT /protein_id="ACS32978.1" FT /translation="MRVAVLSDTHVGDKARALPPVLIEKMRNAEPELILHAGDVTDPSV FT LETLEEIAPVVAVRGNVDYLRLPEEETVEIDRIRIGLIHGHQLLSLNAQFLTLKALDMG FT VDLLVFGHTHRFYFDTFSLYGRKVYLLNPGSPTFPRWDNAGFVLLRTGEEILVKRIKLW FT " FT gene complement(465125..465328) FT /locus_tag="TGAM_0477" FT /note="tg0477" FT CDS complement(465125..465328) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0477" FT /product="Archaeal histone B (Archaeal histone A2)" FT /db_xref="GOA:C5A417" FT /db_xref="InterPro:IPR003958" FT /db_xref="InterPro:IPR009072" FT /db_xref="UniProtKB/TrEMBL:C5A417" FT /inference="protein motif:CDD:HHT1, Histones H3 and H4 FT [Chromatin structure and dynamics]" FT /inference="protein motif:COG:COG2036 Histones H3 and H4; B FT Chromatin structure and dynamics" FT /inference="protein motif:Gene3D:G3D.1.10.20.10 no FT description" FT /inference="protein motif:HMMPfam:PF00808 CBFD_NFYB_HMF FT InterPro:IPR003958 Transcription factor CBF/NF-Y/archaeal FT histone GO:Cellular Component:intracellular (GO:0005622), FT Molecular Function:sequence-specific DNA binding FT (GO:0043565)" FT /inference="protein motif:ProfileScan:PS50028 HIST_TAF FT InterPro:IPR007124 Histone-fold/TFIID-TAF/NF-Y GO:Molecular FT Function:DNA binding (GO:0003677)" FT /inference="protein motif:superfamily:SSF47113 Histone-fold FT InterPro:IPR009072 Histone-fold" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32979.1" FT /translation="MAELPIAPVDRLIRKAGAARVSEEAAKVLAEHLEEKAIEIAKKAV FT ELAHHAGRKTVKAEDIKLAIRS" FT gene complement(465521..465703) FT /locus_tag="TGAM_0478" FT /note="tg0478" FT CDS complement(465521..465703) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0478" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="InterPro:IPR007166" FT /db_xref="UniProtKB/TrEMBL:C5A418" FT /protein_id="ACS32980.1" FT /translation="MKRAQAAVEYLLMIAVALMMVAIVVKYVREAAERAGKTINESSKT FT LSEYLQKEWSNVRGS" FT gene 465778..466401 FT /locus_tag="TGAM_0479" FT /note="tg0479" FT CDS 465778..466401 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0479" FT /product="Nucleotide-binding protein, putative" FT /note="Contains 1 PIN domain" FT /db_xref="InterPro:IPR014856" FT /db_xref="InterPro:IPR022785" FT /db_xref="UniProtKB/TrEMBL:C5A419" FT /inference="protein motif:CDD:COG1458, Predicted FT DNA-binding protein containing PIN domain [General function FT prediction only]" FT /inference="protein motif:COG:COG1458 Predicted DNA-binding FT protein containing PIN domain; R General function FT prediction only" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /protein_id="ACS32981.1" FT /translation="MRTRLGVIMRFVLDTSIFVNPDIRSSFGENPTEAVRSFLEYAKVL FT FGKVEFYMPPGIYREVMNFVDEEDLSPELELYIIKKPPNVHDIKIPAFVVYELIDDIRR FT RIDKGLRVAEKAVRESVIETDNVDKIIQKLRRNYRKALREGIVDSKEDFELILLAKELD FT ATIVSADVGILTWAQKMGIKWIDAAKFKEVLEELVEKVREEKNL" FT gene 466428..466504 FT /locus_tag="TGAM_r013" FT /note="tg_tRNA-Thr1" FT tRNA 466428..466504 FT /locus_tag="TGAM_r013" FT /product="tRNA-Thr" FT /note="codon recognized: ACC" FT gene 466514..466591 FT /locus_tag="TGAM_r014" FT /note="tg_tRNA-Pro1" FT tRNA 466514..466591 FT /locus_tag="TGAM_r014" FT /product="tRNA-Pro" FT /note="codon recognized: CCG" FT gene 466676..468571 FT /locus_tag="TGAM_0480" FT /note="tg0480" FT CDS 466676..468571 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0480" FT /product="Periplasmic binding protein" FT /note="Duplicated PF01497 domains; 1 probable transmembrane FT helix predicted by modhmm" FT /db_xref="GOA:C5A420" FT /db_xref="InterPro:IPR002491" FT /db_xref="UniProtKB/TrEMBL:C5A420" FT /inference="protein motif:CDD:BtuF, Cobalamin binding FT protein BtuF" FT /inference="protein motif:CDD:CeuA, ABC-type enterochelin FT transport system, periplasmic component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:CDD:ChuT, ABC-type hemin FT transport system, periplasmic component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:CDD:FatB, Siderophore binding FT protein FatB" FT /inference="protein motif:CDD:FecB, ABC-type Fe3+-citrate FT transport system, periplasmic component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:CDD:FepB, ABC-type FT Fe3+-hydroxamate transport system, periplasmic component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:FeuA, Periplasmic binding FT protein FeuA" FT /inference="protein motif:CDD:FhuD, Fe3+-siderophore FT binding domain FhuD" FT /inference="protein motif:CDD:HemV-2, Metal binding protein FT HemV-2" FT /inference="protein motif:CDD:HutB, Hemin binding protein FT HutB" FT /inference="protein motif:CDD:Peripla_BP_2, Periplasmic FT binding protein" FT /inference="protein motif:CDD:TroA-like, Helical backbone FT metal receptor (TroA-like domain)" FT /inference="protein motif:CDD:TroA_a, Metal binding protein FT TroA_a" FT /inference="protein motif:CDD:TroA_d, Periplasmic binding FT protein TroA_d" FT /inference="protein motif:CDD:TroA_e, Periplasmic binding FT protein TroA_e" FT /inference="protein motif:CDD:TroA_f, Periplasmic binding FT protein TroA_f" FT /inference="protein motif:CDD:YvrC, Periplasmic binding FT protein YvrC" FT /inference="protein motif:COG:COG0614 ABC-type FT Fe3+-hydroxamate transport system, periplasmic component; P FT Inorganic ion transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.1750 no FT description" FT /inference="protein motif:Gene3D:G3D.3.90.630.10 no FT description" FT /inference="protein motif:HMMPfam:PF01497 Peripla_BP_2 FT InterPro:IPR002491 Periplasmic binding protein GO:Molecular FT Function:iron ion transporter activity (GO:0005381), FT Biological Process:high affinity iron ion transport FT (GO:0006827)" FT /inference="protein motif:ProfileScan:PS50983 FE_B12_PBP FT InterPro:IPR002491 Periplasmic binding protein GO:Molecular FT Function:iron ion transporter activity (GO:0005381), FT Biological Process:high affinity iron ion transport FT (GO:0006827)" FT /inference="protein motif:superfamily:SSF53807 'Helical FT backbone' metal receptor" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32982.1" FT /translation="MMGMKKATVFVIVLLMMGSVIALGCIGGSGTSSSSSSTSTTSASS FT SATPATKTTATSSTTTTATTTTTAEHTQTERAYYPITIKDFANRTVTIEKEPRRVVTIA FT PSLTEDLYYLGLFDRVVGVTQFDDFPPGVANVTRIGGYGKYANLELIANLSPDLIIADS FT YSLSILDQLEKIAPVVIVDPHSINDIPKALDLLGRIFNVEDKAKEVSSQFEAQLEELSS FT AVSGFEKVKVFYVVWGDPLTTAGGDTFISDIIALAGGINIFNDTSGWPAVSMEQIIARD FT PDVIILTPHCGMKLDDAYQKFAAASAAKSGRVYMVENENDLIHPSPRVVRGLEILAKLL FT HPEAFREKYPMTITDFMNRTVTIPKEPQRIVSLAPSITETLFYIGAGDKLVGVTKWADW FT PPAVENISKIGGYGKYANLELIANLSPDLIIADSYSLSILDQLEKIAPVVIVDPKDING FT IYRQIDLLGKVTNREEQAKLVIGEMKGEIAYIESKVRDLPRPEVFFILSYYKGYWTAGR FT GTFMDSVITLAGGRNIFNDTKGWVKVSDEQIIVRDPDVIVVLPTAGVNATELCNGPLSV FT TTAVKEGRVYTATDSNVYQRPSPRIVVAIEEMAEFLHPEAFGVSFNSTACAVSTS" FT gene 468632..469546 FT /gene="phoU-2" FT /locus_tag="TGAM_0481" FT /note="tg0481" FT CDS 468632..469546 FT /codon_start=1 FT /transl_table=11 FT /gene="phoU-2" FT /locus_tag="TGAM_0481" FT /product="Phosphate uptake regulator, phoU and SpoVT/AbrB FT family (phoU)" FT /db_xref="InterPro:IPR007159" FT /db_xref="InterPro:IPR008170" FT /db_xref="UniProtKB/TrEMBL:C5A421" FT /inference="protein motif:BlastProDom:PD014067 FT O57970_PYRHO_O57970; InterPro:IPR008171 PhoU, N-terminal" FT /inference="protein motif:CDD:PhoU, Phosphate uptake FT regulator [Inorganic ion transport and metabolism]" FT /inference="protein motif:COG:COG0704 Phosphate uptake FT regulator; P Inorganic ion transport and metabolism" FT /inference="protein motif:HMMPfam:PF01895 PhoU FT InterPro:IPR008170 PhoU" FT /inference="protein motif:HMMPfam:PF04014 SpoVT_AbrB FT InterPro:IPR007159 SpoVT/AbrB-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32983.1" FT /translation="MEFRKIQFTGRSSYIVSLPKKWVVENNLKQGDTVPMVINPDGSIT FT IFPREPKGTGEKKELRISKEYSPDMAVRLVISAYIQGYDTFEIVFQEEMPFYKVKIRKI FT LQGLPGVEIILDEPTRIIAKSLLDEREVNLSEILMRIRSIVISMLGDLELLAVKPGERE FT ILRDLHDLENELDRFYFLTIRTVNRLLSQRTVVEESGIIRRHFDLIGILFIVRNIERIG FT DHIIRISEVPEPLDFTTLKALFTEVLDRISDRDLGKIDKLMLRLKGEIKAIDSKESTAK FT ESYRRILEYLENIGETIINMALS" FT gene 469594..470415 FT /locus_tag="TGAM_0482" FT /note="tg0482" FT CDS 469594..470415 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0482" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF516 family" FT /db_xref="GOA:C5A422" FT /db_xref="InterPro:IPR007508" FT /db_xref="InterPro:IPR018033" FT /db_xref="UniProtKB/Swiss-Prot:C5A422" FT /inference="protein motif:CDD:DUF516, Protein of unknown FT function (DUF516)" FT /inference="protein motif:COG:COG1650 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF04414 DUF516 FT InterPro:IPR007508 Protein of unknown function DUF516" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32984.1" FT /translation="MKVVMSTKVDLASMNIKEKLVENFGFSETDALFDGNPVFRRGDVL FT LLTTNEEMIYYDNLDAAIETQLGIKPELIVFASRHASKAKMPALTTHVTGNWGKAMYGG FT KDRSLAIAHPTAMKLALLKLNELNDLGWTVCYEATHHGPSELNVPSLFIEIGSSEEEWV FT NDRAGEILAETIVHVLENAGKKHEFKPALGIGGGHYAPKQTKRALEGELAFGHILPKYA FT QPVDEAMLTKAIERTLGGVEVIYVDWKGTKGEMRRKARDLAEKLDLEFIRD" FT gene 470544..471665 FT /gene="ftsZ-1" FT /locus_tag="TGAM_0483" FT /note="tg0483" FT CDS 470544..471665 FT /codon_start=1 FT /transl_table=11 FT /gene="ftsZ-1" FT /locus_tag="TGAM_0483" FT /product="Cell division GTPase, ftsZ-like protein (ftsZ)" FT /db_xref="GOA:C5A423" FT /db_xref="InterPro:IPR000158" FT /db_xref="InterPro:IPR003008" FT /db_xref="InterPro:IPR008280" FT /db_xref="InterPro:IPR018316" FT /db_xref="InterPro:IPR020805" FT /db_xref="InterPro:IPR024757" FT /db_xref="UniProtKB/TrEMBL:C5A423" FT /inference="protein motif:CDD:FtsZ, Cell division GTPase FT [Cell division and chromosome partitioning]" FT /inference="protein motif:CDD:FtsZ, FtsZ is a GTPase that FT is similar to the eukaryotic tubulins and is essential for FT cell division in prokaryotes" FT /inference="protein motif:CDD:FtsZ_type1, FtsZ is a GTPase FT that is similar to the eukaryotic tubulins and is essential FT for cell division in prokaryotes" FT /inference="protein motif:CDD:FtsZ_type2, FtsZ is a GTPase FT that is similar to the eukaryotic tubulins and is essential FT for cell division in prokaryotes" FT /inference="protein motif:CDD:Tubulin, Tubulin/FtsZ family, FT GTPase domain" FT /inference="protein motif:CDD:Tubulin_C, Tubulin/FtsZ FT family, C-terminal domain" FT /inference="protein motif:CDD:Tubulin_FtsZ, FT Tubulin/FtsZ:Family includes tubulin alpha-, beta-, gamma-, FT delta-, and epsilon-tubulins as well as FtsZ, all of which FT are involved in polymer formation" FT /inference="protein motif:COG:COG0206 Cell division GTPase; FT D Cell cycle control, cell division, chromosome FT partitioning" FT /inference="protein motif:FPrintScan:PR00423 CELLDVISFTSZ FT InterPro:IPR000158 Cell division protein FtsZ GO:Molecular FT Function:GTP binding (GO:0005525), Cellular FT Component:cytoplasm (GO:0005737)" FT /inference="protein motif:Gene3D:G3D.3.30.70.450 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.1440 no FT description" FT /inference="protein motif:HMMPfam:PF00091 Tubulin FT InterPro:IPR003008 Tubulin/FtsZ, GTPase" FT /inference="protein motif:HMMPfam:PF03953 Tubulin_C FT InterPro:IPR008280 Tubulin/FtsZ, C-terminal GO:Molecular FT Function:GTPase activity (GO:0003924), Molecular FT Function:GTP binding (GO:0005525), Cellular FT Component:protein complex (GO:0043234), Biological FT Process:protein polymerization (GO:0051258)" FT /inference="protein motif:HMMTigr:TIGR00065 ftsZ:cell FT division protein FtsZ InterPro:IPR000158 Cell division FT protein FtsZ GO:Molecular Function:GTP binding FT (GO:0005525), Cellular Component:cytoplasm (GO:0005737)" FT /inference="protein motif:ScanRegExp:PS01134 FTSZ_1 FT InterPro:IPR000158 Cell division protein FtsZ GO:Molecular FT Function:GTP binding (GO:0005525), Cellular FT Component:cytoplasm (GO:0005737)" FT /inference="protein motif:ScanRegExp:PS01135 FTSZ_2 FT InterPro:IPR000158 Cell division protein FtsZ GO:Molecular FT Function:GTP binding (GO:0005525), Cellular FT Component:cytoplasm (GO:0005737)" FT /inference="protein motif:superfamily:SSF52490 FT Tubulin/Dihydroxyacetone kinase nucleotide-binding domain" FT /inference="protein motif:superfamily:SSF55307 FT Tubulin/Dihydroxyacetone kinase C-terminal domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32985.1" FT /translation="MLKLIEDAIDKTAAPVQSKTEPQVEVQSDIDEELRKLLEQIQAKI FT YVVGVGGAGCNTINRMMQVGIQGAKVIAVNTDAQDLLKIRAHKKILIGKELTRGLGAGN FT NPKVGEEAAKESEREIREALEGADMVFVTCGLGGGTGTGAAPVIAEMAKKMGALTVSVV FT TLPFTVEGIRRIKNAEYGLERLRKASDTVIVIPNDKLMEVAPNLPIHMAFKVADEILVQ FT AVKGITELITKPGLVNLDFNDVRAVMKDGGVAMIGIGESDSEKRALEAAQQALNSPLLD FT VDISGAKGALISISGSDVKLEEAQQIIELVTSKLDPEAQVIWGIQLDEELEKMIRILLV FT VTGVSSPYAVTEEESSPYGEEERRVVRLDLEEF" FT gene 471728..471922 FT /gene="secE" FT /locus_tag="TGAM_0484" FT /note="tg0484" FT CDS 471728..471922 FT /codon_start=1 FT /transl_table=11 FT /gene="secE" FT /locus_tag="TGAM_0484" FT /product="Protein translocase SEC61 complex gamma subunit, FT archaeal/eukaryotic type (secE)" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A424" FT /db_xref="InterPro:IPR001901" FT /db_xref="InterPro:IPR008158" FT /db_xref="InterPro:IPR022943" FT /db_xref="InterPro:IPR023391" FT /db_xref="UniProtKB/TrEMBL:C5A424" FT /inference="protein motif:COG:COG2443 Preprotein FT translocase subunit Sss1; U Intracellular trafficking, FT secretion, and vesicular transport" FT /inference="protein motif:HMMPanther:PTHR12309 SEC61 GAMMA FT SUBUNIT" FT /inference="protein motif:HMMTigr:TIGR00327 FT secE_euk_arch:protein translocase SEC6 InterPro:IPR008158 FT Protein translocase SEC61 complex gamma subunit FT GO:Biological Process:protein transport (GO:0015031), FT Molecular Function:protein translocase activity FT (GO:0015450), Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:ScanRegExp:PS01067 SECE_SEC61G FT InterPro:IPR001901 Protein secE/sec61-gamma protein FT GO:Biological Process:protein targeting (GO:0006605), FT Biological Process:intracellular protein transport FT (GO:0006886), Cellular Component:membrane (GO:0016020)" FT /protein_id="ACS32986.1" FT /translation="MSGNYVEKIKNFLSESRRVLLVTRKPSWKEYKLAAKITGLGMIII FT GTIGLLITMIGYLVMGTGL" FT gene 471934..472392 FT /gene="rpl26E" FT /locus_tag="TGAM_0485" FT /note="tg0485" FT CDS 471934..472392 FT /codon_start=1 FT /transl_table=11 FT /gene="rpl26E" FT /locus_tag="TGAM_0485" FT /product="Ribosomal protein L26E (rpl26E)" FT /db_xref="GOA:C5A425" FT /db_xref="InterPro:IPR005100" FT /db_xref="InterPro:IPR005824" FT /db_xref="InterPro:IPR006645" FT /db_xref="InterPro:IPR008991" FT /db_xref="InterPro:IPR011590" FT /db_xref="InterPro:IPR014723" FT /db_xref="UniProtKB/TrEMBL:C5A425" FT /inference="protein motif:BlastProDom:PD005267 FT O57778_PYRHO_O57778; InterPro:IPR003257 Bacterial NusG FT ribosomal protein GO:Molecular Function:transcriptional FT elongation regulator activity (GO:0003711), Biological FT Process:regulation of transcription, DNA-dependent FT (GO:0006355)" FT /inference="protein motif:CDD:NusG, Transcription FT antiterminator [Transcription]" FT /inference="protein motif:COG:COG0250 Transcription FT antiterminator; K Transcription" FT /inference="protein motif:HMMPanther:PTHR11125 SUPPRESSOR FT OF TY 5 (SPT5)-RELATED" FT /inference="protein motif:HMMPfam:PF00467 KOW FT InterPro:IPR005824 KOW" FT /inference="protein motif:HMMPfam:PF02357 NusG FT InterPro:IPR001062 Bacterial transcription antitermination FT protein NusG GO:Molecular Function:transcriptional FT elongation regulator activity (GO:0003711), Biological FT Process:regulation of transcription, DNA-dependent FT (GO:0006355)" FT /inference="protein motif:HMMSmart:SM00738 no description FT InterPro:IPR006645 NGN GO:Molecular FT Function:transcriptional elongation regulator activity FT (GO:0003711), Biological Process:regulation of FT transcription, DNA-dependent (GO:0006355)" FT /inference="protein motif:HMMSmart:SM00739 no description FT InterPro:IPR006646 KOW (Kyrpides, Ouzounis, Woese) motif" FT /inference="protein motif:HMMTigr:TIGR00405 FT L26e_arch:ribosomal protein L24 InterPro:IPR011590 FT Ribosomal protein L26e, archaeal" FT /inference="protein motif:superfamily:SSF50104 Translation FT proteins SH3-like domain InterPro:IPR008991 Translation FT protein SH3-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32987.1" FT /translation="MSEGKIFTVRVTVGQEETTAKLIYSKVKTYNLPVYAILAPSKVKG FT YIFVEAPSKSAVDEAIKGIRHARGTLPGEVKFEEIEHFLEEKPAVSGFEPGDIVELISG FT PFKGEKAKVVRVDESKDEIVVELIGAIVPIPVTVRGEYVRLISKHQKE" FT gene 472421..472918 FT /gene="rpl11P" FT /locus_tag="TGAM_0486" FT /note="tg0486" FT CDS 472421..472918 FT /codon_start=1 FT /transl_table=11 FT /gene="rpl11P" FT /locus_tag="TGAM_0486" FT /product="LSU ribosomal protein L11P (rpl11P)" FT /db_xref="GOA:C5A426" FT /db_xref="InterPro:IPR000911" FT /db_xref="InterPro:IPR020783" FT /db_xref="InterPro:IPR020784" FT /db_xref="InterPro:IPR020785" FT /db_xref="InterPro:IPR020786" FT /db_xref="UniProtKB/Swiss-Prot:C5A426" FT /inference="protein motif:BlastProDom:PD001367 FT RL11_PYRHO_O57779; InterPro:IPR000911 Ribosomal protein L11 FT GO:Molecular Function:structural constituent of ribosome FT (GO:0003735), Cellular Component:intracellular FT (GO:0005622), Cellular Component:ribosome (GO:0005840), FT Biological Process:protein biosynthesis (GO:0006412)" FT /inference="protein motif:CDD:Ribosomal_L11, Ribosomal FT protein L11" FT /inference="protein motif:CDD:Ribosomal_L11_N, Ribosomal FT protein L11, N-terminal domain" FT /inference="protein motif:CDD:RL11, Ribosomal protein FT L11/L12" FT /inference="protein motif:COG:COG0080 Ribosomal protein FT L11; J Translation, ribosomal structure and biogenesis" FT /inference="protein motif:Gene3D:G3D.1.10.10.250 no FT description" FT /inference="protein motif:HMMPanther:PTHR11661 50S FT ROBOSOMAL PROTEIN L11 InterPro:IPR000911 Ribosomal protein FT L11 GO:Molecular Function:structural constituent of FT ribosome (GO:0003735), Cellular Component:intracellular FT (GO:0005622), Cellular Component:ribosome (GO:0005840), FT Biological Process:protein biosynthesis (GO:0006412)" FT /inference="protein motif:HMMPanther:PTHR11661:SF1 50S FT ROBOSOMAL PROTEIN L11" FT /inference="protein motif:HMMPfam:PF00298 Ribosomal_L11 FT InterPro:IPR000911 Ribosomal protein L11 GO:Molecular FT Function:structural constituent of ribosome (GO:0003735), FT Cellular Component:intracellular (GO:0005622), Cellular FT Component:ribosome (GO:0005840), Biological Process:protein FT biosynthesis (GO:0006412)" FT /inference="protein motif:HMMPfam:PF03946 Ribosomal_L11_N FT InterPro:IPR000911 Ribosomal protein L11 GO:Molecular FT Function:structural constituent of ribosome (GO:0003735), FT Cellular Component:intracellular (GO:0005622), Cellular FT Component:ribosome (GO:0005840), Biological Process:protein FT biosynthesis (GO:0006412)" FT /inference="protein motif:HMMPIR:PIRSF002179 Ribosomal FT protein L11/L12" FT /inference="protein motif:HMMSmart:SM00649 no description FT InterPro:IPR000911 Ribosomal protein L11 GO:Molecular FT Function:structural constituent of ribosome (GO:0003735), FT Cellular Component:intracellular (GO:0005622), Cellular FT Component:ribosome (GO:0005840), Biological Process:protein FT biosynthesis (GO:0006412)" FT /inference="protein motif:ScanRegExp:PS00359 RIBOSOMAL_L11 FT InterPro:IPR000911 Ribosomal protein L11 GO:Molecular FT Function:structural constituent of ribosome (GO:0003735), FT Cellular Component:intracellular (GO:0005622), Cellular FT Component:ribosome (GO:0005840), Biological Process:protein FT biosynthesis (GO:0006412)" FT /inference="protein motif:superfamily:SSF46906 Ribosomal FT protein L11, C-terminal domain InterPro:IPR000911 Ribosomal FT protein L11 GO:Molecular Function:structural constituent of FT ribosome (GO:0003735), Cellular Component:intracellular FT (GO:0005622), Cellular Component:ribosome (GO:0005840), FT Biological Process:protein biosynthesis (GO:0006412)" FT /inference="protein motif:superfamily:SSF54747 Ribosomal FT protein L11, N-terminal domain InterPro:IPR000911 Ribosomal FT protein L11 GO:Molecular Function:structural constituent of FT ribosome (GO:0003735), Cellular Component:intracellular FT (GO:0005622), Cellular Component:ribosome (GO:0005840), FT Biological Process:protein biosynthesis (GO:0006412)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32988.1" FT /translation="MPQVVEVLVEGGKASPGPPLGPAIGPLGLNVKQVVDEINKATKEF FT EGMQVPVKIIVEDPKKKTFRIEVGIPPTSQLIKKELGIPKGSSEPVHSPVGNLTMEQVI FT KIAKMKIDQMLAPTLKAASKEVIGTALSMGVTVEGKDPREVQREIDEGLYDELFAKAEE FT AE" FT gene 473031..473681 FT /gene="rpl1P" FT /locus_tag="TGAM_0487" FT /note="tg0487" FT CDS 473031..473681 FT /codon_start=1 FT /transl_table=11 FT /gene="rpl1P" FT /locus_tag="TGAM_0487" FT /product="LSU ribosomal protein L1P (rpl1P)" FT /db_xref="GOA:C5A427" FT /db_xref="InterPro:IPR002143" FT /db_xref="InterPro:IPR016094" FT /db_xref="InterPro:IPR016095" FT /db_xref="InterPro:IPR023669" FT /db_xref="InterPro:IPR023673" FT /db_xref="InterPro:IPR023674" FT /db_xref="UniProtKB/TrEMBL:C5A427" FT /inference="protein motif:BlastProDom:PD001314 FT RL1_PYRHO_O57782; InterPro:IPR002143 Ribosomal protein L1 FT GO:Molecular Function:structural constituent of ribosome FT (GO:0003735), Cellular Component:intracellular FT (GO:0005622), Cellular Component:ribosome (GO:0005840), FT Biological Process:protein biosynthesis (GO:0006412)" FT /inference="protein motif:CDD:Ribosomal_L1, Ribosomal FT protein L1p/L10e family" FT /inference="protein motif:COG:COG0081 Ribosomal protein L1; FT J Translation, ribosomal structure and biogenesis" FT /inference="protein motif:Gene3D:G3D.3.30.190.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR11805 60S FT RIBOSOMAL PROTEIN L10A - RELATED InterPro:IPR002143 FT Ribosomal protein L1 GO:Molecular Function:structural FT constituent of ribosome (GO:0003735), Cellular FT Component:intracellular (GO:0005622), Cellular FT Component:ribosome (GO:0005840), Biological Process:protein FT biosynthesis (GO:0006412)" FT /inference="protein motif:HMMPanther:PTHR11805:SF1 50S FT RIBOSOMAL PROTEIN L1P" FT /inference="protein motif:HMMPfam:PF00687 Ribosomal_L1 FT InterPro:IPR002143 Ribosomal protein L1 GO:Molecular FT Function:structural constituent of ribosome (GO:0003735), FT Cellular Component:intracellular (GO:0005622), Cellular FT Component:ribosome (GO:0005840), Biological Process:protein FT biosynthesis (GO:0006412)" FT /inference="protein motif:ScanRegExp:PS01199 RIBOSOMAL_L1 FT InterPro:IPR002143 Ribosomal protein L1 GO:Molecular FT Function:structural constituent of ribosome (GO:0003735), FT Cellular Component:intracellular (GO:0005622), Cellular FT Component:ribosome (GO:0005840), Biological Process:protein FT biosynthesis (GO:0006412)" FT /inference="protein motif:superfamily:SSF56808 Ribosomal FT protein L1" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32989.1" FT /translation="MAFDRQKVVEAVKEAKARAKPRNFTQTVEMAVNLKDIDLRKPENR FT FKLEVVLPHGRGKEPKIAVIADGAVAEAAKRLGLDVISGEQLEELAKSPREARKLAKRY FT DFFIAAAPLMPKIGRYLGRYLGPRNKMPQVVPPTLTNLEPIVNRLKKTVRIQLKNNPVV FT HAPIGTEDMDDEKLAENAEAVLNAIINKLERGENQVKSVYIKTTMGPAVKVER" FT gene 473687..474709 FT /gene="rpl10E-1" FT /locus_tag="TGAM_0488" FT /note="tg0488" FT CDS 473687..474709 FT /codon_start=1 FT /transl_table=11 FT /gene="rpl10E-1" FT /locus_tag="TGAM_0488" FT /product="LSU ribosomal protein L10E (rpl10E)" FT /db_xref="GOA:C5A428" FT /db_xref="InterPro:IPR001790" FT /db_xref="InterPro:IPR001813" FT /db_xref="InterPro:IPR013522" FT /db_xref="InterPro:IPR022909" FT /db_xref="UniProtKB/Swiss-Prot:C5A428" FT /inference="protein motif:CDD:Ribosomal_L10, Ribosomal FT protein L10" FT /inference="protein motif:CDD:RplJ, Ribosomal protein L10 FT [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:COG:COG0244 Ribosomal protein FT L10; J Translation, ribosomal structure and biogenesis" FT /inference="protein motif:Gene3D:G3D.1.10.10.380 no FT description" FT /inference="protein motif:HMMPanther:PTHR11560 60S ACIDIC FT RIBOSOMAL PROTEIN P0-RELATED" FT /inference="protein motif:HMMPanther:PTHR11560:SF8 ACIDIC FT RIBOSOMAL PROTEIN P0" FT /inference="protein motif:HMMPfam:PF00428 Ribosomal_60s FT InterPro:IPR001813 Ribosomal protein 60S GO:Molecular FT Function:structural constituent of ribosome (GO:0003735), FT Cellular Component:intracellular (GO:0005622), Cellular FT Component:ribosome (GO:0005840), Biological FT Process:translational elongation (GO:0006414)" FT /inference="protein motif:HMMPfam:PF00466 Ribosomal_L10 FT InterPro:IPR001790 Ribosomal protein L10 GO:Cellular FT Component:intracellular (GO:0005622), Biological FT Process:ribosome biogenesis and assembly (GO:0042254)" FT /inference="protein motif:superfamily:SSF63882 Molybdenum FT cofactor biosynthesis protein MoeA, N-terminal and linker FT domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32990.1" FT /translation="MAHVAEWKKKEVEELTKIIKSHPVIALVDVAGVPAYPLSKMRDKL FT RGKALLRVSRNTLIELAIKRAAQELNKPDLEKLADYIEGGAAILATEMNPFKLYKLLEE FT SKTPAPAKPGAVVPKDVVIPAGPTSLAPGPLVGEMQALGIPARIEKGKVTIQKDYTVLK FT AGEVITEQLARILNALGIEPLEVGLNLLAAYEDDIIYTPDVLAIDEQEYINMLQQAYMH FT AFNLSVNTAYPTKQTIEAIIQKAYLGAKNVAVEAGYITPETVEDILGRAIRAFLLIAQN FT LPEELLDEKTKELLNAQAQVAVAAPQPAEEKVEEAEEEEEEEEEASEEEALAGLGALFG FT " FT gene 474787..475107 FT /gene="rpl12A" FT /locus_tag="TGAM_0489" FT /note="tg0489" FT CDS 474787..475107 FT /codon_start=1 FT /transl_table=11 FT /gene="rpl12A" FT /locus_tag="TGAM_0489" FT /product="LSU ribosomal protein L12A (rpl12A)" FT /db_xref="GOA:C5A429" FT /db_xref="InterPro:IPR001813" FT /db_xref="InterPro:IPR022295" FT /db_xref="UniProtKB/TrEMBL:C5A429" FT /inference="protein motif:COG:COG2058 Ribosomal protein FT L12E/L44/L45/RPP1/RPP2; J Translation, ribosomal structure FT and biogenesis" FT /inference="protein motif:HMMPanther:PTHR10053 ACIDIC FT RIBOSOMAL PROTEIN P2" FT /inference="protein motif:HMMPanther:PTHR10053:SF1 ACIDIC FT RIBOSOMAL PROTEIN P2" FT /inference="protein motif:HMMPfam:PF00428 Ribosomal_60s FT InterPro:IPR001813 Ribosomal protein 60S GO:Molecular FT Function:structural constituent of ribosome (GO:0003735), FT Cellular Component:intracellular (GO:0005622), Cellular FT Component:ribosome (GO:0005840), Biological FT Process:translational elongation (GO:0006414)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32991.1" FT /translation="MEYVYAALLLHAAGKEINEENLKKVLEAAGVSPDEARIKALVAAL FT EGVNIDEVIEKAAMPVAAPVAVAAAPAPAEGGAEEAQEEEEEEEEEVSEEEALAGLGAL FT FG" FT gene complement(475124..475597) FT /gene="dcd" FT /locus_tag="TGAM_0490" FT /note="tg0490" FT CDS complement(475124..475597) FT /codon_start=1 FT /transl_table=11 FT /gene="dcd" FT /locus_tag="TGAM_0490" FT /product="Deoxycytidine triphosphate deaminase (dCTP FT deaminase) (dcd)" FT /EC_number="3.5.4.13" FT /db_xref="GOA:C5A430" FT /db_xref="InterPro:IPR008180" FT /db_xref="InterPro:IPR011962" FT /db_xref="UniProtKB/Swiss-Prot:C5A430" FT /inference="protein motif:BlastProDom:PD004900 FT DCD_PYRHO_O57706; InterPro:IPR003232 dCTP Deaminase" FT /inference="protein motif:CDD:Dcd, Deoxycytidine deaminase FT [Nucleotide transport and metabolism]" FT /inference="protein motif:CDD:dUTPase, dUTPase" FT /inference="protein motif:COG:COG0717 Deoxycytidine FT deaminase; F Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.2.70.40.10 no FT description" FT /inference="protein motif:HMMPfam:PF00692 dUTPase FT InterPro:IPR008180 DeoxyUTP pyrophosphatase GO:Biological FT Process:dUTP metabolism (GO:0046080)" FT /inference="protein motif:HMMTigr:TIGR02274 FT dCTP_deam:deoxycytidine triphosphate deami FT InterPro:IPR011962 Deoxycytidine triphosphate deaminase FT GO:Biological Process:dUTP biosynthesis (GO:0006229), FT Molecular Function:dCTP deaminase activity (GO:0008829)" FT /inference="protein motif:superfamily:SSF51283 FT dUTPase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS32992.1" FT /translation="MMLPDWKIEKEILIEPFSKESLQPAGYDLRVGKEAYVEGKLIDVE FT EAGNVIIPPKKHALILTLERVKLPDDVMGDMKIRSSLAREGILGSFAWVDPGWDGNLTL FT MLFNASNEPVVLEYGERFVQIAFIRLEEPAKRPYRGNYQGSRRIALSKRRVRK" FT gene 475647..475724 FT /locus_tag="TGAM_r015" FT /note="tg_tRNA-Arg1" FT tRNA 475647..475724 FT /locus_tag="TGAM_r015" FT /product="tRNA-Arg" FT /note="codon recognized: CGA" FT gene 476385..476460 FT /locus_tag="TGAM_r016" FT /note="tg_tRNA-Gln2" FT tRNA 476385..476460 FT /locus_tag="TGAM_r016" FT /product="tRNA-Gln" FT /note="codon recognized: CAG" FT gene 476864..477091 FT /locus_tag="TGAM_0491" FT /note="tg0491" FT CDS 476864..477091 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0491" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A431" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /protein_id="ACS32993.1" FT /translation="MIMNENLKLECEIRNLLRLKGPLSVAFITRFLNEMGFECTRQKVE FT RVLRDLVSRGVVEASLRYNRRKHYQLRREE" FT gene 477088..477582 FT /locus_tag="TGAM_0492" FT /note="tg0492" FT CDS 477088..477582 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0492" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A432" FT /protein_id="ACS32994.1" FT /translation="MMASSASSSVILGNKRRMLMIEFLQMKNGRAELRDIVEYIAEKEG FT NTDRKHRKSVYVSLMQTHIPKLEREGVVAFERGVITLLQVPDNVTLYMEVVQRNDISWS FT TFYAGLSVIFLVTALWFGNLLLVFASLTYLIVAIFQRMKMYRILQPRDSKKGRNTRRNG FT R" FT gene 477792..478388 FT /locus_tag="TGAM_0493" FT /note="tg0493" FT CDS 477792..478388 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0493" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF1102 family; 1 probable transmembrane FT helix predicted by modhmm" FT /db_xref="InterPro:IPR009482" FT /db_xref="UniProtKB/TrEMBL:C5A433" FT /inference="protein motif:CDD:DUF1102, Protein of unknown FT function (DUF1102)" FT /inference="protein motif:HMMPfam:PF06510 DUF1102 FT InterPro:IPR009482 Protein of unknown function DUF1102" FT /protein_id="ACS32995.1" FT /translation="MRKNIALGIFGLIVAFGLVLGAGANFRDYKATRSVHWDIVTDDSE FT LIDLTPLQPYAYIDNETGVLVVDISPDNPNYPGYGMGLSPNSEYNFDEVFEVSNDLWEE FT NMTIVVRITSDNDEIQLYGADGDIHDVTTGDVVEYSDTAVNSVCFVVESGDAVKVGMDF FT DAGNHAPGTSQNATLHIEAWRLGTEPSSLVGKCGQ" FT gene 478402..478938 FT /locus_tag="TGAM_0494" FT /note="tg0494" FT CDS 478402..478938 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0494" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF1102 family; 1 probable transmembrane FT helix predicted by modhmm" FT /db_xref="InterPro:IPR009482" FT /db_xref="UniProtKB/TrEMBL:C5A434" FT /inference="protein motif:CDD:DUF1102, Protein of unknown FT function (DUF1102)" FT /inference="protein motif:HMMPfam:PF06510 DUF1102 FT InterPro:IPR009482 Protein of unknown function DUF1102" FT /protein_id="ACS32996.1" FT /translation="MNKLFGLALLMIGMVLAVGAGANFRYYSADRHASFDIVSDDNELI FT DLTAMQPYVKYSNGKLYVDISDGNSNRPSGGGAGLSPNTTYVFEEMFKVSNELWENNET FT DFPICVKVNTNHEQVKVFAGNYTSPIAGPASNIQFTVYHGNPVKVGMIFDTTNSTLGQE FT DFTMTITAHRGTCEP" FT gene 478986..480044 FT /locus_tag="TGAM_0495" FT /note="tg0495" FT CDS 478986..480044 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0495" FT /product="Signal peptidase I, S26B/S24 family" FT /note="Serine protease; 4 probable transmembrane helices FT predicted by modhmm" FT /db_xref="GOA:C5A435" FT /db_xref="InterPro:IPR001733" FT /db_xref="InterPro:IPR011056" FT /db_xref="InterPro:IPR015927" FT /db_xref="InterPro:IPR019759" FT /db_xref="UniProtKB/TrEMBL:C5A435" FT /inference="protein motif:COG:COG0681 Signal peptidase I; U FT Intracellular trafficking, secretion, and vesicular FT transport" FT /inference="protein motif:FPrintScan:PR00728 SIGNALPTASE FT InterPro:IPR001733 Peptidase S26B, eukaryotic signal FT peptidase GO:Biological Process:signal peptide processing FT (GO:0006465), Biological Process:proteolysis (GO:0006508), FT Molecular Function:peptidase activity (GO:0008233), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:Gene3D:G3D.2.10.109.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10806 MICROSOMAL FT SIGNAL PEPTIDASE SUBUNIT InterPro:IPR001733 Peptidase S26B, FT eukaryotic signal peptidase GO:Biological Process:signal FT peptide processing (GO:0006465), Biological FT Process:proteolysis (GO:0006508), Molecular FT Function:peptidase activity (GO:0008233), Cellular FT Component:membrane (GO:0016020)" FT /inference="protein motif:HMMPanther:PTHR10806:SF2 gb FT def:hypothetical protein [aeropyrum pernix]" FT /inference="protein motif:HMMPfam:PF00717 Peptidase_S24 FT InterPro:IPR006198 Peptidase S24, S26A and S26B FT GO:Biological Process:proteolysis (GO:0006508), Molecular FT Function:serine-type peptidase activity (GO:0008236)" FT /inference="protein motif:HMMTigr:TIGR02228 FT sigpep_I_arch:signal peptidase I InterPro:IPR001733 FT Peptidase S26B, eukaryotic signal peptidase GO:Biological FT Process:signal peptide processing (GO:0006465), Biological FT Process:proteolysis (GO:0006508), Molecular FT Function:peptidase activity (GO:0008233), Cellular FT Component:membrane (GO:0016020)" FT /inference="protein motif:superfamily:SSF51306 LexA/Signal FT peptidase InterPro:IPR011056 Peptidase S24 and S26, FT C-terminal region" FT /protein_id="ACS32997.1" FT /translation="MKRLIEYTFTFIVLVFLMGSLAGFFLDRPVFVSYAYSDSMTPTIN FT KGDLFFVNPFARNFDVGDIIVFHRGSGWTVHRIFGVTNDGYITKGDHNVATDQQDGKFP FT DVKRSDITGKVVTLFGKPLVIRGAGAFLQSVKLKLTNPYAIALLLVLGAVLTFSGGSGK FT RHRRVKYYRISVRTVYAIGSVLIIAGFLFVTVASWGTLAFTYSSTLAGGQRTGWYLPGS FT TFEKNLTVENRAVYPFYYFVEGKSTRAQLLDSSFLYLKGGSKKNITVHVTVPKDTRIYR FT EEFQVHSYPAILPASIVVSLYSISPYLPLLAYALFLSTLMVFFYRLAGISDGDVIRIRK FT RRGFLSKVLGDG" FT gene 480047..480976 FT /locus_tag="TGAM_0496" FT /note="tg0496" FT CDS 480047..480976 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0496" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A436" FT /inference="protein motif:HMMPfam:PF06510 DUF1102 FT InterPro:IPR009482 Protein of unknown function DUF1102" FT /protein_id="ACS32998.1" FT /translation="MRRIVMFFVMFLGLLLVVGSSGNFREYGADRIVKMAIVDGNDSYV FT SYSCSGSVIYMNKSSSVQFTAMTLSNSMNKTMSVRVEGDFSSLPEGLSGSVNDSWHTLD FT VGESVVIEGNFSADDNAISGTYTVPLTVYAEWDGGSAELKECSITVSLNSPKYVLRKGI FT VGGVYNYTSGDYTIVLQLNFTNNGPSGEFIIWDKIPSHLCSRCLGTCHWATANVTVEST FT SATAGTVLRPPTNISCGCHNIFNCCAGDLIGWRVHVSHGETVTLEMTLNVSFKVPSGCV FT ANFTLNRGAHLCGTCLRSNKISVTVTGG" FT gene 480981..481952 FT /locus_tag="TGAM_0497" FT /note="tg0497" FT CDS 480981..481952 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0497" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A437" FT /protein_id="ACS32999.1" FT /translation="MKDVKFDKRYLLLAGVSVSIVLAVLFGAYSSAAYSKAPISTSAKY FT STLYTEEGSFVHFGVFSNSSIYKSGSTHDYYPSKITMLIGGNYTFRTNPSSPGTYTATM FT HLDYYVSSGKKKVYIYREEIPLGSGSFEGSFTLPLTFNMSLLSEKLKRVREGTGLYRAE FT QEVYVTVEVKPEGRDSFSQRIGLSKDSASMLYLTGTEKDYKKVTRSVSTTTNSLSFAGS FT DVRVSTARTLFPAMAILFAVPPIGLIYSRREKKTEPKALKSLKKYTVEGTPPGGKRVKL FT KSAEDLERTFELVDRPIIHYRDGNIDVYAIADGDTVYEYWAS" FT gene 482028..482561 FT /gene="ppa" FT /locus_tag="TGAM_0498" FT /note="tg0498" FT CDS 482028..482561 FT /codon_start=1 FT /transl_table=11 FT /gene="ppa" FT /locus_tag="TGAM_0498" FT /product="Inorganic pyrophosphatase (ppa)" FT /EC_number="3.6.1.1" FT /db_xref="GOA:C5A438" FT /db_xref="InterPro:IPR008162" FT /db_xref="UniProtKB/TrEMBL:C5A438" FT /inference="protein motif:BlastProDom:PD002014 FT IPYR_PYRFU_Q8U438; InterPro:IPR008162 Inorganic FT pyrophosphatase GO:Molecular Function:magnesium ion binding FT (GO:0000287), Molecular Function:inorganic diphosphatase FT activity (GO:0004427), Cellular Component:cytoplasm FT (GO:0005737), Biological Process:phosphate metabolism FT (GO:0006796)" FT /inference="protein motif:CDD:Ppa, Inorganic FT pyrophosphatase [Energy production and conversion]" FT /inference="protein motif:CDD:Pyrophosphatase, Inorganic FT pyrophosphatase" FT /inference="protein motif:COG:COG0221 Inorganic FT pyrophosphatase; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.3.90.80.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10286 INORGANIC FT PYROPHOSPHATASE InterPro:IPR008162 Inorganic FT pyrophosphatase GO:Molecular Function:magnesium ion binding FT (GO:0000287), Molecular Function:inorganic diphosphatase FT activity (GO:0004427), Cellular Component:cytoplasm FT (GO:0005737), Biological Process:phosphate metabolism FT (GO:0006796)" FT /inference="protein motif:HMMPanther:PTHR10286:SF1 FT INORGANIC PYROPHOSPHATASE" FT /inference="protein motif:HMMPfam:PF00719 Pyrophosphatase FT InterPro:IPR008162 Inorganic pyrophosphatase GO:Molecular FT Function:magnesium ion binding (GO:0000287), Molecular FT Function:inorganic diphosphatase activity (GO:0004427), FT Cellular Component:cytoplasm (GO:0005737), Biological FT Process:phosphate metabolism (GO:0006796)" FT /inference="protein motif:ScanRegExp:PS00387 PPASE FT InterPro:IPR008162 Inorganic pyrophosphatase GO:Molecular FT Function:magnesium ion binding (GO:0000287), Molecular FT Function:inorganic diphosphatase activity (GO:0004427), FT Cellular Component:cytoplasm (GO:0005737), Biological FT Process:phosphate metabolism (GO:0006796)" FT /inference="protein motif:superfamily:SSF50324 Inorganic FT pyrophosphatase InterPro:IPR008162 Inorganic FT pyrophosphatase GO:Molecular Function:magnesium ion binding FT (GO:0000287), Molecular Function:inorganic diphosphatase FT activity (GO:0004427), Cellular Component:cytoplasm FT (GO:0005737), Biological Process:phosphate metabolism FT (GO:0006796)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33000.1" FT /translation="MNPFHELEPGPNVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRV FT LYSPFFYPVDYGIIPQTWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDW FT KVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFQRYKELQGKTTVVEGWGNAEEAKREI FT LRAIELYKEKFGKE" FT gene 482594..483154 FT /gene="rpoE1" FT /locus_tag="TGAM_0499" FT /note="tg0499" FT CDS 482594..483154 FT /codon_start=1 FT /transl_table=11 FT /gene="rpoE1" FT /locus_tag="TGAM_0499" FT /product="DNA-directed RNA polymerase subunit E' (rpoE1)" FT /EC_number="2.7.7.6" FT /db_xref="GOA:C5A439" FT /db_xref="InterPro:IPR003029" FT /db_xref="InterPro:IPR004519" FT /db_xref="InterPro:IPR005576" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR022967" FT /db_xref="UniProtKB/TrEMBL:C5A439" FT /inference="protein motif:CDD:RNA_pol_Rpb7_N, RNA FT polymerase Rpb7, N-terminal domain" FT /inference="protein motif:CDD:RPB7, DNA-directed RNA FT polymerase, subunit E' [Transcription]" FT /inference="protein motif:CDD:VacB, Exoribonuclease R FT [Transcription]" FT /inference="protein motif:COG:COG1095 DNA-directed RNA FT polymerase, subunit E'; K Transcription" FT /inference="protein motif:Gene3D:G3D.2.40.50.140 no FT description InterPro:IPR012340 Nucleic acid-binding, FT OB-fold, subgroup" FT /inference="protein motif:HMMPanther:PTHR12578 DNA-DIRECTED FT RNA POLYMERASE SUBUNIT E" FT /inference="protein motif:HMMPanther:PTHR12578:SF3 FT DNA-DIRECTED RNA POLYMERASE SUBUNIT E" FT /inference="protein motif:HMMPfam:PF00575 S1 FT InterPro:IPR003029 RNA binding S1 GO:Molecular Function:RNA FT binding (GO:0003723)" FT /inference="protein motif:HMMPfam:PF03876 RNA_pol_Rpb7_N FT InterPro:IPR005576 RNA polymerase Rpb7, N-terminal FT GO:Molecular Function:DNA-directed RNA polymerase activity FT (GO:0003899), Biological Process:transcription FT (GO:0006350)" FT /inference="protein motif:HMMSmart:SM00316 no description FT InterPro:IPR003029 RNA binding S1 GO:Molecular Function:RNA FT binding (GO:0003723)" FT /inference="protein motif:HMMTigr:TIGR00448 FT rpoE:DNA-directed RNA polymerase InterPro:IPR004519 FT DNA-directed RNA polymerase GO:Molecular Function:DNA FT binding (GO:0003677), Molecular Function:DNA-directed RNA FT polymerase activity (GO:0003899), Cellular FT Component:nucleus (GO:0005634), Biological FT Process:transcription (GO:0006350)" FT /inference="protein motif:ProfileScan:PS50126 S1 FT InterPro:IPR003029 RNA binding S1 GO:Molecular Function:RNA FT binding (GO:0003723)" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /inference="protein motif:superfamily:SSF88798 N-terminal, FT heterodimerisation domain of RBP4 (RpoE)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33001.1" FT /translation="MYKLLKVKDVVRIPPRMFTMDPKEAAKLVLRGTYEGIYDRDEGVV FT LAVLDVEEVSEGVIVPGDGATYHEVVFNVLVWQPFMHEVVEGEVIDVAPYGAFVRIGPM FT DGLVHISQLMDDYVVFDEKNKQFLGKETKRILKLGDEVRARVIAISVKSRVIRENKIGL FT TMRQPGLGKFEWIEKEKRKSKEA" FT gene 483157..483345 FT /gene="rpoE2" FT /locus_tag="TGAM_0500" FT /note="tg0500" FT CDS 483157..483345 FT /codon_start=1 FT /transl_table=11 FT /gene="rpoE2" FT /locus_tag="TGAM_0500" FT /product="DNA-directed RNA polymerase subunit E' (rpoE2)" FT /EC_number="2.7.7.6" FT /db_xref="GOA:C5A440" FT /db_xref="InterPro:IPR007178" FT /db_xref="InterPro:IPR022800" FT /db_xref="UniProtKB/TrEMBL:C5A440" FT /inference="protein motif:CDD:COG2093, DNA-directed RNA FT polymerase, subunit E'' [Transcription]" FT /inference="protein motif:CDD:RpoE2, Archaeal DNA-directed FT RNA polymerase subunit E'' (RpoE'' or RpoE2)" FT /inference="protein motif:COG:COG2093 DNA-directed RNA FT polymerase, subunit E''; K Transcription" FT /inference="protein motif:HMMPfam:PF04035 RpoE2 FT InterPro:IPR007178 Archaeal DNA-directed RNA polymerase FT subunit E, RpoE2 GO:Molecular Function:DNA binding FT (GO:0003677), Molecular Function:DNA-directed RNA FT polymerase activity (GO:0003899), Biological FT Process:transcription (GO:0006350)" FT /protein_id="ACS33002.1" FT /translation="MVKERACRHCHYITTEDRCPVCGSRDLSDEWFDLVIIIDPEKSRI FT AKKLGVKVPGKYAIRVR" FT gene 483347..483889 FT /locus_tag="TGAM_0501" FT /note="tg0501" FT CDS 483347..483889 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0501" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF359 family" FT /db_xref="InterPro:IPR007164" FT /db_xref="UniProtKB/TrEMBL:C5A441" FT /inference="protein motif:CDD:DUF359, Protein of unknown FT function (DUF359)" FT /inference="protein motif:COG:COG1909 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF04019 DUF359 FT InterPro:IPR007164 Protein of unknown function DUF359" FT /inference="protein motif:HMMPIR:PIRSF006533 FT Uncharacterised conserved protein InterPro:IPR007164 FT Protein of unknown function DUF359" FT /protein_id="ACS33003.1" FT /translation="MCGDFYFYLPPSLRDKLKEPLGELVRGEIPEPYLRILPLLRKVPF FT LITVGDVVTENVIRLGMHPSVAIYDHRTKRRDYNPSVGSEAVFLTVRNPPGTITKALLN FT AVRKGVEIAGRGRSVHIKVNGEEDLAAIPAVLYAPLGSVVLYGQPDEGVVLIKVTPECK FT RRCASILAKMEVVRDGD" FT gene 483879..484175 FT /gene="rps24E" FT /locus_tag="TGAM_0502" FT /note="tg0502" FT CDS 483879..484175 FT /codon_start=1 FT /transl_table=11 FT /gene="rps24E" FT /locus_tag="TGAM_0502" FT /product="SSU ribosomal protein S24E (rps24E)" FT /db_xref="GOA:C5A442" FT /db_xref="InterPro:IPR001976" FT /db_xref="InterPro:IPR012677" FT /db_xref="InterPro:IPR012678" FT /db_xref="InterPro:IPR018098" FT /db_xref="InterPro:IPR023647" FT /db_xref="UniProtKB/Swiss-Prot:C5A442" FT /inference="protein motif:BlastProDom:PD006052 FT RS24_PYRFU_Q8U442; InterPro:IPR001976 Ribosomal protein FT S24e GO:Molecular Function:structural constituent of FT ribosome (GO:0003735), Cellular Component:intracellular FT (GO:0005622), Cellular Component:ribosome (GO:0005840), FT Biological Process:protein biosynthesis (GO:0006412)" FT /inference="protein motif:CDD:Ribosomal_S24e, Ribosomal FT protein S24e" FT /inference="protein motif:CDD:RPS24A, Ribosomal protein FT S24E [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:COG:COG2004 Ribosomal protein FT S24E; J Translation, ribosomal structure and biogenesis" FT /inference="protein motif:HMMPanther:PTHR10496 40S FT RIBOSOMAL PROTEIN S24 InterPro:IPR001976 Ribosomal protein FT S24e GO:Molecular Function:structural constituent of FT ribosome (GO:0003735), Cellular Component:intracellular FT (GO:0005622), Cellular Component:ribosome (GO:0005840), FT Biological Process:protein biosynthesis (GO:0006412)" FT /inference="protein motif:HMMPanther:PTHR10496:SF1 40S FT RIBOSOMAL PROTEIN S24" FT /inference="protein motif:HMMPfam:PF01282 Ribosomal_S24e FT InterPro:IPR001976 Ribosomal protein S24e GO:Molecular FT Function:structural constituent of ribosome (GO:0003735), FT Cellular Component:intracellular (GO:0005622), Cellular FT Component:ribosome (GO:0005840), Biological Process:protein FT biosynthesis (GO:0006412)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33004.1" FT /translation="MEIKVTEIRENKLLGRKEIYFDIIHEGEPTPSREAVKGKLAAMLD FT LDPNTMVLQYIRSYFGSHVSKGYAKAYETRERMLYIEPEYILLRDGLIQKEEE" FT gene 484186..484356 FT /gene="rps27AE" FT /locus_tag="TGAM_0503" FT /note="tg0503" FT CDS 484186..484356 FT /codon_start=1 FT /transl_table=11 FT /gene="rps27AE" FT /locus_tag="TGAM_0503" FT /product="SSU ribosomal protein S27AE (rps27AE)" FT /db_xref="GOA:C5A443" FT /db_xref="InterPro:IPR002906" FT /db_xref="InterPro:IPR022845" FT /db_xref="UniProtKB/Swiss-Prot:C5A443" FT /inference="protein motif:CDD:RPS31, Ribosomal protein FT S27AE [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:COG:COG1998 Ribosomal protein FT S27AE; J Translation, ribosomal structure and biogenesis" FT /inference="protein motif:HMMPanther:PTHR10666 UBIQUITIN" FT /inference="protein motif:HMMPanther:PTHR10666:SF9 FT UBIQUITIN" FT /inference="protein motif:HMMPfam:PF01599 Ribosomal_S27 FT InterPro:IPR002906 Ribosomal protein S27a GO:Molecular FT Function:structural constituent of ribosome (GO:0003735), FT Cellular Component:intracellular (GO:0005622), Cellular FT Component:ribosome (GO:0005840), Biological Process:protein FT biosynthesis (GO:0006412)" FT /inference="protein motif:superfamily:SSF57586 TNF FT receptor-like" FT /protein_id="ACS33005.1" FT /translation="MAKKKKTSQKWKLYEVKGGKVVRKNKFCPRCGPGVFMANHKDRWS FT CGRCGYTEWKK" FT gene 484381..484968 FT /locus_tag="TGAM_0504" FT /note="tg0504" FT CDS 484381..484968 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0504" FT /product="Methylase, putative, hemK and PrmA related" FT /note="Location of this gene downstream of S24E and S27AE FT ribosomal proteins suggests it might be ribosomal protein FT L11 methyltransferase (PrmA)" FT /db_xref="GOA:C5A444" FT /db_xref="InterPro:IPR004557" FT /db_xref="InterPro:IPR007848" FT /db_xref="UniProtKB/TrEMBL:C5A444" FT /inference="protein motif:CDD:COG4123, Predicted FT O-methyltransferase [General function prediction only]" FT /inference="protein motif:CDD:HemK, Methylase of FT polypeptide chain release factors [Translation, ribosomal FT structure and biogenesis]" FT /inference="protein motif:CDD:Pcm, Protein-L-isoaspartate FT carboxylmethyltransferase [Posttranslational modification, FT protein turnover, chaperones]" FT /inference="protein motif:CDD:PrmA, Ribosomal protein L11 FT methylase [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:PrmA, Ribosomal protein L11 FT methyltransferase (PrmA)" FT /inference="protein motif:CDD:RsmC, 16S RNA G1207 methylase FT RsmC [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:CDD:TrmA, SAM-dependent FT methyltransferases related to tRNA FT (uracil-5-)-methyltransferase [Translation, ribosomal FT structure and biogenesis]" FT /inference="protein motif:COG:COG2890 Methylase of FT polypeptide chain release factors; J Translation, ribosomal FT structure and biogenesis" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR10756 FT N6-DNA-METHYLTRANSFERASE - RELATED" FT /inference="protein motif:HMMPanther:PTHR10756:SF3 FT PROTOPORPHYRINOGEN OXIDASE" FT /inference="protein motif:HMMPfam:PF05175 MTS FT InterPro:IPR007848 Methyltransferase small GO:Molecular FT Function:methyltransferase activity (GO:0008168)" FT /inference="protein motif:HMMTigr:TIGR00537 FT hemK_rel_arch:methylase, putative InterPro:IPR004557 FT Putative methylase GO:Molecular Function:methyltransferase FT activity (GO:0008168)" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /protein_id="ACS33006.1" FT /translation="MTMPIYYGIKLELHSDVYEPAEDTFLLAETLEVRPGEIALDVGTG FT TGLIALLMARKAKYVLGVDVNPKAVELARRNARLNGISNVEFRLSDLFENVSGRFDVIT FT FNAPYLPGEPEKAIDLALVGGKTGREVIDRFIAEVPDHLNENGRVYLVQSSITGVEETM FT REFEKAGLRGEVIARRHLFFEDIVVILAEKKG" FT gene complement(484970..485638) FT /locus_tag="TGAM_0505" FT /note="tg0505" FT CDS complement(484970..485638) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0505" FT /product="Conserved hypothetical protein" FT /note="Belongs to UPF0128 family" FT /db_xref="InterPro:IPR005266" FT /db_xref="UniProtKB/TrEMBL:C5A445" FT /inference="protein motif:BlastProDom:PD023377 FT YE88_PYRFU_Q8U0U4; InterPro:IPR005266 Conserved FT hypothetical protein 703" FT /inference="protein motif:CDD:UPF0128, Uncharacterized FT protein family (UPF0128)" FT /inference="protein motif:COG:COG1851 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF03673 UPF0128 FT InterPro:IPR005266 Conserved hypothetical protein 703" FT /inference="protein motif:HMMTigr:TIGR00703 FT TIGR00703:conserved hypothetical protein T FT InterPro:IPR005266 Conserved hypothetical protein 703" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33007.1" FT /translation="MLEGYYIVENTGVVPAERRFKFKDLKAWGYDLHLGTIDGKEAYFV FT SRTGTHEEGETYTQDGREYHITETQREIPKNARLLARIVIERGQPYLEFWLEAEEANYP FT LAKEDPRLILHRFWTAKKFNQLEKHVGSVGLTTDFFKDRVFVKSLPLPFEEYPPKVRRV FT LREVRDVHRDLTGFGRFVFQYYGEEDKTHNYRLWWLLPTIHLFDIEVSNEVDKILAMLD FT " FT gene 485733..486557 FT /locus_tag="TGAM_0506" FT /note="tg0506" FT CDS 485733..486557 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0506" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF835 family; 3 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR008553" FT /db_xref="UniProtKB/TrEMBL:C5A446" FT /inference="protein motif:CDD:DUF835, Protein of unknown FT function (DUF835)" FT /inference="protein motif:HMMPfam:PF05763 DUF835 FT InterPro:IPR008553 Protein of unknown function DUF835" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33008.1" FT /translation="MVKVAVLIAGLVSLMVYSVLLILAYLYSRSIVAPLSRKFSMNVIL FT SGLLAVAASIVVIIDAVTGKVLWWLEAALFLVSYVLLMVSVIHYLRLSSRVLSGSKERE FT EYGERGPLIGGFSVTPEELPKLTPLCGMFKTKIYIGRSKNPTVCDFDRRIWLSRIEAAD FT SVDPAKLHVILESVIRTISEGGGSGLVLLDGIEFLLLHNDFRSVVKFLASLKDYMLLSN FT SAVVVVLDEETLGEREISVIRREFPPLEIEKLLSSLEKHALFGALSREDLKE" FT gene complement(486558..487016) FT /locus_tag="TGAM_0507" FT /note="tg0507" FT CDS complement(486558..487016) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0507" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR007171" FT /db_xref="InterPro:IPR023131" FT /db_xref="UniProtKB/TrEMBL:C5A447" FT /inference="protein motif:CDD:DUF371, Domain of unknown FT function (DUF371)" FT /inference="protein motif:COG:COG2090 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF04027 DUF371 FT InterPro:IPR007171 Protein of unknown function DUF371" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33009.1" FT /translation="MRRGVGNTTSSRRNKLVEVIRCRGHENVRATHRSTLEFTKEDYLT FT PRGDCIICIGADRGINDLSEEFKAALREGRKLLIRIRVEELVDEVVAWGSPGLILDHPY FT SIVVRKSDYIDARTLAIRANKAARDIDRKLVARLKDPRTEAVIELIII" FT gene complement(486973..487557) FT /gene="tdk" FT /locus_tag="TGAM_0508" FT /note="tg0508" FT CDS complement(486973..487557) FT /codon_start=1 FT /transl_table=11 FT /gene="tdk" FT /locus_tag="TGAM_0508" FT /product="Thymidine kinase (tdk)" FT /EC_number="2.7.1.21" FT /db_xref="GOA:C5A448" FT /db_xref="InterPro:IPR001267" FT /db_xref="InterPro:IPR020633" FT /db_xref="InterPro:IPR020634" FT /db_xref="UniProtKB/TrEMBL:C5A448" FT /inference="protein motif:CDD:Tdk, Thymidine kinase FT [Nucleotide transport and metabolism]" FT /inference="protein motif:CDD:TK, Thymidine kinase" FT /inference="protein motif:COG:COG1435 Thymidine kinase; F FT Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR11441 THYMIDINE FT KINASE InterPro:IPR001267 Thymidine kinase GO:Molecular FT Function:thymidine kinase activity (GO:0004797), Molecular FT Function:ATP binding (GO:0005524)" FT /inference="protein motif:HMMPanther:PTHR11441:SF1 FT THYMIDINE KINASE" FT /inference="protein motif:HMMPfam:PF00265 TK FT InterPro:IPR001267 Thymidine kinase GO:Molecular FT Function:thymidine kinase activity (GO:0004797), Molecular FT Function:ATP binding (GO:0005524)" FT /inference="protein motif:ScanRegExp:PS00603 FT TK_CELLULAR_TYPE InterPro:IPR001267 Thymidine kinase FT GO:Molecular Function:thymidine kinase activity FT (GO:0004797), Molecular Function:ATP binding (GO:0005524)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33010.1" FT /translation="MHPGGFLEVITGPMFAGKTTELIKRIERQAFARRKVALFKPSIDT FT RYSKEEVVAHNGLRYEAFVVPTDENGVRRIMETTIREGFEVIGIDEVQFFPIEIVDVLN FT RLADEGVYVIASGLNLDFKGDPFPVTRELLVRADNIVYLTAVCTVCGRPATRSQRLIDG FT KPAPRNSPVILVGGRESYEARCREHHIVPEE" FT gene complement(487597..488034) FT /gene="nefD-1" FT /locus_tag="TGAM_0509" FT /note="tg0509" FT CDS complement(487597..488034) FT /codon_start=1 FT /transl_table=11 FT /gene="nefD-1" FT /locus_tag="TGAM_0509" FT /product="Nodulation efficiency protein D related protein FT (nefD)" FT /note="Belongs to DUF107 family; 3 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR002810" FT /db_xref="InterPro:IPR012340" FT /db_xref="UniProtKB/TrEMBL:C5A449" FT /inference="protein motif:CDD:COG1585, Membrane protein FT implicated in regulation of membrane protease activity FT [Posttranslational modification, protein turnover, FT chaperones / Intracellular trafficking and secretion]" FT /inference="protein motif:COG:COG1585 Membrane protein FT implicated in regulation of membrane protease activity; O FT Posttranslational modification, protein turnover, FT chaperones" FT /inference="protein motif:HMMPfam:PF01957 NfeD FT InterPro:IPR002810 Nodulation efficiency, NfeD" FT /inference="protein motif:superfamily:SSF51294 FT Hedgehog/intein (Hint) domain" FT /protein_id="ACS33011.1" FT /translation="MRAMSTALAVSLLILGLLIILLDMMVTAFITPIGVTFAVLGLLLG FT FGMNFTESFVISLIAAVISYILIGRYIRRDVEDVGRKERKYTFDLVGKRGKVVKVAEDH FT YLVELEGDRWIAFSDDELQAGDVVEVKAVDGVKLIVKKAER" FT gene complement(488031..488984) FT /locus_tag="TGAM_0510" FT /note="tg0510" FT CDS complement(488031..488984) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0510" FT /product="Prohibitin/Stomatin-like protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A450" FT /db_xref="InterPro:IPR001107" FT /db_xref="InterPro:IPR001972" FT /db_xref="InterPro:IPR018080" FT /db_xref="UniProtKB/TrEMBL:C5A450" FT /inference="protein motif:CDD:Band_7, SPFH domain / Band 7 FT family" FT /inference="protein motif:CDD:Band_7, The band 7 domain of FT flotillin (reggie) like proteins" FT /inference="protein motif:CDD:Band_7_2, A subgroup of the FT band 7 domain of flotillin (reggie) like proteins" FT /inference="protein motif:CDD:Band_7_4, A subgroup of the FT band 7 domain of flotillin (reggie) like proteins" FT /inference="protein motif:CDD:Band_7_HflC, Band_7_HflC:The FT band 7 domain of flotillin (reggie) like proteins" FT /inference="protein motif:CDD:Band_7_HflK, Band_7_HflK:The FT band 7 domain of flotillin (reggie) like proteins" FT /inference="protein motif:CDD:Band_7_stomatin_like, FT Band_7_stomatin_like:A subgroup of the band 7 domain of FT flotillin (reggie) like proteins similar to stomatin and FT podicin (two lipid raft-associated integral membrane FT proteins)" FT /inference="protein motif:CDD:COG2268, Uncharacterized FT protein conserved in bacteria [Function unknown]" FT /inference="protein motif:CDD:HflC, Membrane protease FT subunits, stomatin/prohibitin homologs [Posttranslational FT modification, protein turnover, chaperones]" FT /inference="protein motif:CDD:PHB, prohibitin homologues; FT prohibitin homologues" FT /inference="protein motif:COG:COG0330 Membrane protease FT subunits, stomatin/prohibitin homologs; O Posttranslational FT modification, protein turnover, chaperones" FT /inference="protein motif:FPrintScan:PR00721 STOMATIN FT InterPro:IPR001972 Stomatin GO:Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:HMMPanther:PTHR10264 FT STOMATIN-RELATED InterPro:IPR001107 Band 7 protein" FT /inference="protein motif:HMMPanther:PTHR10264:SF17 FT STOMATIN-RELATED" FT /inference="protein motif:HMMPfam:PF01145 Band_7 FT InterPro:IPR001107 Band 7 protein" FT /inference="protein motif:HMMSmart:SM00244 no description FT InterPro:IPR001107 Band 7 protein" FT /inference="protein motif:ScanRegExp:PS01270 BAND_7 FT InterPro:IPR001972 Stomatin GO:Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:superfamily:SSF51197 Clavaminate FT synthase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33012.1" FT /translation="MGFATVALVVIGGFLLLLLLLGVKVIRPYQKGLVERLGKFNRILD FT PGIHFIIPFMERVKKVDMREHVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVS FT NFLMAIIKLAQTNLRAIIGEMELDETLSGRDIINARLREELDKITDRWGVKITRVEIQR FT IDPPKDIQEAMAKQMTAEREKRAMILLAEGKKEAAIREAEGQKQAAILKAEGEKQRQIL FT IAEGQAQAIKKVLEALKMADEKYLTLQYIEKLPDLAKYGNLIVPYDTEALIGLLRVLQK FT VKDTPLPKPPEPPKEEGKESSELKDEDVEKLKNLME" FT gene complement(489067..490392) FT /locus_tag="TGAM_0511" FT /note="tg0511" FT CDS complement(489067..490392) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0511" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="InterPro:IPR011047" FT /db_xref="UniProtKB/TrEMBL:C5A451" FT /inference="protein motif:superfamily:SSF50960 TolB, FT C-terminal domain InterPro:IPR011042 TolB, C-terminal" FT /protein_id="ACS33013.1" FT /translation="MTIMRRLSFLIAIVLVVVIALSVMTSNGAETSLRGYWAKVYNGNY FT VRGGVSALVKTENGIYLVGGISFPNSDKGFIARLSEEGEVSKAVGYGVMGLDCMFEGGA FT ALGRNLMVAGILHNGTFGNRRLMIAKIGENMKPLWAETFNISVFPELAGIEVVDDGILV FT AGGFVGEKDGVFVMKLNDKGEVLWTRLYISEGFLVPTGMAPDGEGGFLLLGVEVDYGSS FT KMVLIDIDGKGKVKWAKAYKEGVYGNAILKEGERIIVVGEIGNGLEGENRGDVFVALLN FT EDGNVIWAKAYGSEEMDFGGTAGLLDGGIVVAGIYGGKIVSGIPPRVENYTIWILNLEK FT NGKVRWEKAYWRGYPSFVVPDGDSILIGGFLISGNESRIFLARIKGDGSSPDSGITPDY FT DVHEVRLKATNFELREEELKVKALRVEFETQNIPLEAEPIRS" FT gene 490482..492386 FT /locus_tag="TGAM_0512" FT /note="tg0512" FT CDS 490482..492386 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0512" FT /product="3'-phosphoadenosine 5'-phosphosulfate FT sulfotransferase (PAPS reductase), containing one PUA FT domain and 2 4Fe-4S binding domains" FT /db_xref="GOA:C5A452" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR002478" FT /db_xref="InterPro:IPR002500" FT /db_xref="InterPro:IPR004521" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015947" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A452" FT /inference="protein motif:CDD:COG2016, Predicted FT RNA-binding protein (contains PUA domain) [Translation, FT ribosomal structure and biogenesis]" FT /inference="protein motif:CDD:COG5270, PUA domain FT (predicted RNA-binding domain) [Translation, ribosomal FT structure and biogenesis]" FT /inference="protein motif:CDD:CysH, 3'-phosphoadenosine FT 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD FT synthetase and related enzymes [Amino acid transport and FT metabolism / Coenzyme metabolism]" FT /inference="protein motif:CDD:PAPS_reduct, Phosphoadenosine FT phosphosulfate reductase family" FT /inference="protein motif:CDD:PAPS_reductase, This domain FT is found in phosphoadenosine phosphosulphate (PAPS) FT reductase enzymes or PAPS sulphotransferase" FT /inference="protein motif:CDD:PUA, PUA domain" FT /inference="protein motif:COG:COG0175 3'-phosphoadenosine FT 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD FT synthetase and related enzymes; E Amino acid transport and FT metabolism" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.610 no FT description" FT /inference="protein motif:HMMPanther:PTHR12217 LIGATIN AND FT MCT-1" FT /inference="protein motif:HMMPanther:PTHR12217:SF3 MCT-1 FT PROTEIN-RELATED" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:HMMPfam:PF01472 PUA FT InterPro:IPR002478 PUA GO:Molecular Function:RNA binding FT (GO:0003723)" FT /inference="protein motif:HMMPfam:PF01507 PAPS_reduct FT InterPro:IPR002500 Phosphoadenosine phosphosulfate FT reductase GO:Biological Process:metabolism (GO:0008152), FT Molecular Function:transferase activity (GO:0016740)" FT /inference="protein motif:HMMSmart:SM00359 no description FT InterPro:IPR002478 PUA GO:Molecular Function:RNA binding FT (GO:0003723)" FT /inference="protein motif:HMMTigr:TIGR00451 FT unchar_dom_2:uncharacterized domain InterPro:IPR004521 FT Uncharacterized domain 2" FT /inference="protein motif:ProfileScan:PS50890 PUA FT InterPro:IPR002478 PUA GO:Molecular Function:RNA binding FT (GO:0003723)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF46548 FT InterPro:IPR009051 Alpha-helical ferredoxin" FT /inference="protein motif:superfamily:SSF52402 Adenine FT nucleotide alpha hydrolases-like" FT /inference="protein motif:superfamily:SSF88697 PUA FT domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33014.1" FT /translation="MRDVGRPVFLGKAYINWCEKCNVPLIGDSCAVHGKEGVSRLNITP FT PGDLRFAFEKDLEFIKSVFAEHFGVDVGEVLDGKIVLLNKLPSEDDAYEIIVDGYVFGY FT VKFDPIKLSWKAGLKVEGAIALWKRFGKKMKKWVIVDKGAVEPIKNGANLLAVGVLEAD FT PSIRVNDDVILVSEDGEVFATGIAKKDYSALIRGERGTGVKPKRQKSVNYREGRKATME FT DVLRANAIALEEKVMKSREFMRRVASKYSDLPVAVAFSGGKDSLAVLGLALEEFGSDFT FT VFFNNTGIEFPETVEYVGKLRKELEPKGIKFVVADAGDAFWRALYVFSPPGRDYRWCCK FT VTKLGPITLAIKENYPKGVLMFVGQRKYESIKRFKQPRVWRNEWVPNEIGASPIFHWRA FT IEVWLYIFSRKLPYNPLYERGFDRIGCFLCPSASLAEFERLKREKPELWEKWFKALEYW FT RRRFGLPEEWITYGFWRWKRLSKGEKAIARKLGVDIPEERSWEPVKVKIEEASEGYELE FT FNTVLNKKRLLQVAPILGEVSVEGDVVRAGEVEFFTRTRKAKAPDEREAVSAYYLVKRA FT YECVGCGVCVGKCPEEALSIDEKSKKIVVDWNRCTHCRECMEVCPLLKIKNPEEGSQL" FT gene 492503..493816 FT /locus_tag="TGAM_0513" FT /note="tg0513" FT CDS 492503..493816 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0513" FT /product="ATPase of the AAA superfamily, putative" FT /db_xref="UniProtKB/TrEMBL:C5A453" FT /inference="protein motif:CDD:COG1373, Predicted ATPase FT (AAA+ superfamily) [General function prediction only]" FT /inference="protein motif:COG:COG1373 Predicted ATPase FT (AAA+ superfamily); R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /inference="protein motif:superfamily:SSF52980 Restriction FT endonuclease-like" FT /protein_id="ACS33015.1" FT /translation="MATMMEALEEVIAEFHEFGVPEAKERELTLPLNVDVAVSVYGLRR FT TGKTHLLYLAMRKLIENGLPIKRIFYVNFEDERLAGISARDLSTIVQLYYKHNPDADVM FT YLFLDEVQVVEGWEMFVRRLLEGKRARVFITGSSSKLLSREIATSLRGRTLGFRLFPLS FT FREFLTFKGFELKKPLTERKRGILLRLLEEYIEYGGFPGIVDYSPPLKIRTLQEYLNLI FT VYRDLVERYGIEKVSALKALIRILVRNFARKISIRKLHSLVSSTGTKISRPTLAEYLSY FT LEDVGFVLPLRKYHPSDVESLRSQPKLYIADVGLATALGVGDTGYRIENIVAVELLRRK FT HYFEPRLEVHYWEDGRGEVDFVVSLGGKVRELVQVSYALDEPQTRERELRALLRASKTL FT NCRNLTIITWEEEGVEEIDGRRIRFLPLWRWLIERTPL" FT gene 493850..494473 FT /locus_tag="TGAM_0514" FT /note="tg0514" FT CDS 493850..494473 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0514" FT /product="Zinc-finger protein, translation initiation FT factor 2 beta related protein" FT /note="UCP015877 member" FT /db_xref="GOA:C5A454" FT /db_xref="InterPro:IPR002735" FT /db_xref="InterPro:IPR012041" FT /db_xref="UniProtKB/TrEMBL:C5A454" FT /inference="protein motif:CDD:COG1326, Uncharacterized FT archaeal Zn-finger protein [General function prediction FT only]" FT /inference="protein motif:COG:COG1326 Uncharacterized FT archaeal Zn-finger protein; R General function prediction FT only" FT /inference="protein motif:HMMPfam:PF01873 eIF-5_eIF-2B FT InterPro:IPR002735 Translation initiation factor IF5 FT GO:Molecular Function:translation initiation factor FT activity (GO:0003743), Biological Process:translational FT initiation (GO:0006413)" FT /inference="protein motif:HMMPIR:PIRSF015877 FT Uncharacterised Zn-finger protein InterPro:IPR012041 FT Uncharacterised conserved protein UCP015877, zinc finger" FT /inference="protein motif:superfamily:SSF75689 Zinc-binding FT domain of translation initiation factor 2 beta" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33016.1" FT /translation="MEEYFICPECGSDDVEVIKERGRELTLRCNECGNVWHVTLPKLVR FT VPLIVSKHERSFKSEAELPEGEEIRVGDIVETEEDEVRITGIELEGGKRVNKAKVGEIV FT TLWGESLTYPKVIKVSIYMPKGITQSFRVKVPRDEEFAVGEVVEVGGYTFKIEKIKTER FT KMLHHGKAQADKIVALMGHHIPRARARRSLEIYRGYEDESRAEE" FT gene 494501..494689 FT /locus_tag="TGAM_0515" FT /note="tg0515" FT CDS 494501..494689 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0515" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A455" FT /protein_id="ACS33017.1" FT /translation="MSAMERKTTYRFLLVLVLILTVFYTLGLVGVVPFKVSYYITIFMI FT VLFVLLRWDYHRGERRE" FT gene 494682..495266 FT /gene="cbiZ" FT /locus_tag="TGAM_0516" FT /note="tg0516" FT CDS 494682..495266 FT /codon_start=1 FT /transl_table=11 FT /gene="cbiZ" FT /locus_tag="TGAM_0516" FT /product="Adenosylcobinamide amidohydrolase (AdoCbi FT hydrolase) (CbiZ)" FT /EC_number="3.5.1.90" FT /db_xref="GOA:C5A456" FT /db_xref="InterPro:IPR002808" FT /db_xref="UniProtKB/TrEMBL:C5A456" FT /inference="protein motif:BlastProDom:PD022649 FT Q9YAA7_AERPE_Q9YAA7" FT /inference="protein motif:CDD:COG1865, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:DUF105, Domain of unknown FT function DUF105" FT /inference="protein motif:COG:COG1865 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01955 CbiZ FT InterPro:IPR002808 Adenosylcobinamide amidohydrolase, CbiZ" FT /protein_id="ACS33018.1" FT /translation="MNEGFIKHFSRRMLALSNAPHRGGLVEAEGFFFMKVHKDYSGDYR FT ADCRAFELENGLKDFVGFMTAAEVGKVLSVSRSGSVTAYVTAGLTNPAIAGEEPPPWKP FT GTINMALVIEDGLTVGAMANAIMTATEAKTYTLLKLGYNATGTTSDGIGVFAFPGDVEW FT AGTATDLGLNIGRAVRSALEESLKKWESTRS" FT gene complement(495252..496019) FT /locus_tag="TGAM_0517" FT /note="tg0517" FT CDS complement(495252..496019) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0517" FT /product="SAM-dependent methyltransferase, putative" FT /db_xref="GOA:C5A457" FT /db_xref="UniProtKB/TrEMBL:C5A457" FT /inference="protein motif:COG:COG0500 SAM-dependent FT methyltransferases; Q Secondary metabolites biosynthesis, FT transport and catabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPfam:PF08242 Methyltransf_12 FT InterPro:IPR013217 Methyltransferase type 12" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33019.1" FT /translation="MEELYRYLRAYMDPKSEVAQNRFIGLRSFFNWAVKEGLFPERRKL FT RILDLCAGTGIAGSALYETLREWGYEPSLTVVDKRKEDLLLVEEWVSGEVYGAVMDCLD FT DLSKLGKFDVALIFGHTMPHFNPFQTAELFRNVAGVLESDGVFLLEETDRFGAFFYRRA FT YREIVPEVRGDDYTIVSLDEGYDPLKGIIKRGYYKLPGWERIGEMETRYWDLAGLAGIG FT KALFEEVRIIRKSEHGVVSAGDMIYLRGPLTPR" FT gene 496105..496824 FT /locus_tag="TGAM_0518" FT /note="tg0518" FT CDS 496105..496824 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0518" FT /product="Conserved hypothetical protein" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A458" FT /protein_id="ACS33020.1" FT /translation="MTIMVRFGGHWSEWVLTGVIGGLYLCSLLTGIEALATIAGALFWL FT SLPTLLFGRRVKVKKNRLVLEVGWPVTLFRVEIAPEEIIEVVDLERAEGVLPLRYYRLV FT LPLTVLAVSVGLLGLVKDSRWAFVWFGWIYWGIVGVIPLLFPKKAKKLSVMATLAFGAF FT MSCLARLLGIKEYPMYIVTSVILVPFITDVRERTVVLVTEKGTYLVSSLSDREIEQFID FT NLRRLISGSGGSNVPAS" FT gene 496799..497200 FT /locus_tag="TGAM_0519" FT /note="tg0519" FT CDS 496799..497200 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0519" FT /product="Conserved hypothetical protein" FT /db_xref="GOA:C5A459" FT /db_xref="InterPro:IPR012287" FT /db_xref="InterPro:IPR013249" FT /db_xref="UniProtKB/TrEMBL:C5A459" FT /inference="protein motif:Gene3D:G3D.1.10.10.60 no FT description InterPro:IPR012287 Homeodomain-related FT GO:Molecular Function:DNA binding (GO:0003677), Biological FT Process:regulation of transcription (GO:0045449)" FT /inference="protein motif:HMMPfam:PF08281 Sigma70_r4_2 FT InterPro:IPR013249 Sigma-70, region 4 type 2" FT /inference="protein motif:superfamily:SSF46894 C-terminal FT effector domain of the bipartite response regulators" FT /protein_id="ACS33021.1" FT /translation="MVRMFRLPEAMERVWLMRAKGMREIEIARELGVSRQAVNKALRDA FT RVKLFEAFFGLAEVFSWEVARINAEKGFMVARGRCLGRSVRVYAFYIPGKGLRAFFEGD FT FPDCVLRHAVELGIIDEPDREKLINALES" FT gene complement(497197..497874) FT /locus_tag="TGAM_0520" FT /note="tg0520" FT CDS complement(497197..497874) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0520" FT /product="Conserved hypothetical protein" FT /note="paralogous to the upstream ORF tg0521; 7 probable FT transmembrane helices predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A460" FT /protein_id="ACS33022.1" FT /translation="MGALTFTAKDEPGIGFRIGYTYLSERARRRANRVSGAGIMLTGVL FT LILLSFFLPMPWLMAVLLSCFGVIIPVTYLVAKREYELEELSEEAPEKPERKIRPPRVG FT KYLALQTVFVGLSLVLLINGKLPDREISILIFVQLFLLALTVPFSQPLVFQLAPKFKGK FT MALGFAKAMTVVSAMVALQLAVAALKPKASPLLVVLMLLVSLGAIFYAVFVALTSAYEE FT GYY" FT gene complement(497924..498733) FT /locus_tag="TGAM_0521" FT /note="tg0521" FT CDS complement(497924..498733) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0521" FT /product="Conserved hypothetical protein" FT /note="paralogous to the downstream ORF tg0520; 7 probable FT transmembrane helices predicted by modhmm" FT /db_xref="InterPro:IPR012867" FT /db_xref="UniProtKB/TrEMBL:C5A461" FT /inference="protein motif:HMMPfam:PF07853 DUF1648 FT InterPro:IPR012867 Protein of unknown function DUF1648" FT /protein_id="ACS33023.1" FT /translation="MNEKAFEVFVSLTLLLAGLLTLAFRKKQNPLIGFRVGYTYHSERA FT WEKVNTFAGVFSVACSLLLLVLALYGVSMNAFILVMMAFVGAELFVGLWMARREYELEE FT LSEEAPEKPPAIETEKQSISIKPYILIQLGFLAIYLLLVALLWERLPERVATHFNASGE FT PDSYSSKFWGVIGVPVLVWLLPLVLTIPAREPGFFARVAFYPRSLRAWCLFTTVLSGGI FT VLVVTLALLYNAGLVSGNAITYGAYLFLGVLIFAVYRLLTVGKGERV" FT gene complement(498730..499089) FT /locus_tag="TGAM_0522" FT /note="tg0522" FT CDS complement(498730..499089) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0522" FT /product="Transcription regulator, PadR-like family" FT /db_xref="InterPro:IPR005149" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A462" FT /inference="protein motif:CDD:COG1695, Predicted FT transcriptional regulators [Transcription]" FT /inference="protein motif:CDD:PadR, Transcriptional FT regulator PadR-like family" FT /inference="protein motif:COG:COG1695 Predicted FT transcriptional regulators; K Transcription" FT /inference="protein motif:HMMPfam:PF03551 PadR FT InterPro:IPR005149 Transcriptional regulator PadR-like" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /protein_id="ACS33024.1" FT /translation="MLGNPKEKALRKLRKDLRSGLYSYLVLSLLSEEGELHGYAIRKRL FT GELSDGKLVPSEGALYDILKNLKKLGLLRDDWAEVGGRPRKYYRLTDLGRDVLLALRDE FT IRTIERTLIRLEGLE" FT gene complement(499096..499827) FT /locus_tag="TGAM_0523" FT /note="tg0523" FT CDS complement(499096..499827) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0523" FT /product="Conserved hypothetical protein" FT /note="7 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR011397" FT /db_xref="UniProtKB/TrEMBL:C5A463" FT /protein_id="ACS33025.1" FT /translation="MSPFLFIILGGFLAWATVYAVGFRKLRWAEFILGLVAFLLAMIIQ FT NPVQQLPLMGMGITSNKDVVARGTGFMVIVAVWLGLAAGIIQEGIKYYLVRERKLREAV FT FVGLGFGVTEAVVIAVAKVLPVVLKGGSVEVPLLSALLSMAERYFATLFHVGTAVFLAY FT SAKQGFGKRGLIYMIGLHTIIDSGAAYFQLAFFMKPRPYHTLNFLAYFLEVVAAVIGIV FT VFAYGVLKALEEPEDEEKPIW" FT gene complement(499832..500182) FT /locus_tag="TGAM_0524" FT /note="tg0524" FT CDS complement(499832..500182) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0524" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF74 family" FT /db_xref="InterPro:IPR002765" FT /db_xref="UniProtKB/TrEMBL:C5A464" FT /inference="protein motif:CDD:DUF74, Domain of unknown FT function DUF74" FT /inference="protein motif:COG:COG0393 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01906 DUF74 FT InterPro:IPR002765 Protein of unknown function DUF74" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33026.1" FT /translation="MRCMETIEGVVVVTTETVPGYRIVEVKGLARGGVVKATHIGRDIL FT AALRNIKGGEVKEYTQMMAEAREEALRRMALSAKELGANAVVNMRFATSNVSSNMAEVY FT AYGTAVVIEKEE" FT gene complement(500268..500882) FT /locus_tag="TGAM_0525" FT /note="tg0525" FT CDS complement(500268..500882) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0525" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A465" FT /inference="protein motif:CDD:COG3863, Uncharacterized FT distant relative of cell wall-associated hydrolases FT [Function unknown]" FT /inference="protein motif:COG:COG3863 Uncharacterized FT distant relative of cell wall-associated hydrolases; S FT Function unknown" FT /inference="protein motif:HMMPfam:PF06520 DUF1105 FT InterPro:IPR010529 Protein of unknown function DUF1105" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33027.1" FT /translation="MKRLGAIFVALLFLGATVPEVSAGDLLNYFWDTRTYQHPYPTDVR FT PGDLVYGHSPDLFNAIIPGYWIHVAIVAWYNESIDDWMVIEAKIGKGIIITPLSEFLSR FT YDVVALQRVKVSDEIRLRAVQFAYQQLGKPYNYDYFSKPKVYDDRYYCSQLVWAAYLVA FT SNFQVNLDENDGGWSWKYFYAVAPQEVYDDPMTYTIYYHKA" FT gene 500981..502006 FT /locus_tag="TGAM_0526" FT /note="tg0526" FT CDS 500981..502006 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0526" FT /product="Diphthamide synthesis DPH2 protein" FT /db_xref="GOA:C5A466" FT /db_xref="InterPro:IPR002728" FT /db_xref="InterPro:IPR013022" FT /db_xref="InterPro:IPR016435" FT /db_xref="InterPro:IPR022428" FT /db_xref="UniProtKB/TrEMBL:C5A466" FT /inference="protein motif:BlastProDom:PD004399 FT Q8U1Z1_PYRFU_Q8U1Z1; InterPro:IPR002728 Diphthamide FT synthesis DPH2 protein" FT /inference="protein motif:CDD:Diphthamide_syn, Putative FT diphthamide synthesis protein" FT /inference="protein motif:CDD:DPH2, Diphthamide synthase FT subunit DPH2 [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:COG:COG1736 Diphthamide synthase FT subunit DPH2; J Translation, ribosomal structure and FT biogenesis" FT /inference="protein motif:HMMPanther:PTHR10762 DIPTHERIA FT TOXIN RESISTANCE PROTEIN-RELATED InterPro:IPR002728 FT Diphthamide synthesis DPH2 protein" FT /inference="protein motif:HMMPanther:PTHR10762:SF1 FT DIPTHERIA TOXIN RESISTANCE PROTEIN-RELATED" FT /inference="protein motif:HMMPfam:PF01866 Diphthamide_syn FT InterPro:IPR002728 Diphthamide synthesis DPH2 protein" FT /inference="protein motif:HMMTigr:TIGR00322 FT diphth2_R:diphthamide biosynthesis protein FT InterPro:IPR002728 Diphthamide synthesis DPH2 protein" FT /inference="protein motif:superfamily:SSF51658 Xylose FT isomerase-like" FT /protein_id="ACS33028.1" FT /translation="MHEVPHGEILKELKKLGAECVLIQSPEGLRREAEELAGFLEENGL FT TVILHGEINYGACDPADSDARRLGCDALIHLGHSYMRLNLEVPTIFVPAFAKVELVPAL FT EKNIEEIRKLGRRIALVTTAQHVHRLDEAREFLEKNGFEVLIGRGDSRVSWPGQVLGCN FT FSSAKVEAEGVLFIGSGLFHPLGVALATKKPTLAINPYSGDAIWMDAEAERLIRKRWAQ FT IAKAMDAKSFGVVVSTKKGQLRLAEAKRIVELLRGHGRKARLIAMDHISYPKLEGFPFD FT AYVVVACPRVPIDDYENWRKPVLTPREVEPLLGLKKEYEFDEIPGVERREDEPLGVSLK FT L" FT gene 502139..503911 FT /locus_tag="TGAM_0527" FT /note="tg0527" FT CDS 502139..503911 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0527" FT /product="Conserved hypothetical protein" FT /note="Contains ARM repeat" FT /db_xref="GOA:C5A467" FT /db_xref="InterPro:IPR011989" FT /db_xref="InterPro:IPR016024" FT /db_xref="UniProtKB/TrEMBL:C5A467" FT /inference="protein motif:Gene3D:G3D.1.25.10.10 no FT description InterPro:IPR011989 Armadillo-like helical FT GO:Molecular Function:binding (GO:0005488)" FT /inference="protein motif:superfamily:SSF48371 ARM repeat" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33029.1" FT /translation="MLVDDKTIKVIEEYLRSWEIKKAIELALKDNVYLLALFKLLHESD FT DTLKIRALIALEEVLKALPDVKRLILVDKFLDDVIKVLKSDNDGVLIHAIRTIGRLIGG FT IPLHPETFVKLAHAFKDLVKSRKNEALVLEILSVLGGMSVTSPSPRIMDVISRLLKSKD FT LRLKAMGLRLLLNVSTYSGDPSLLKTLFSEIPEMLSEKDVPLADFVLDILFEIAGYPLK FT EELIDDVARVLTAVKNLALRKSSKLADKARIVAEKLELAIHNYYLKNPEKAKEKIHELL FT INEYFYEAIDLALAVGDTYILKWLAEILEKFNKETLKINERVLPGPKYLSIPPEKKIQR FT YIRPPTLAQFREVKKSALEIALNEPASQHELTEDEKIELKRAVEVGDEEKLLQLSRKKP FT EVVFELVRKLEEGDKFEKMDALWALSKLAEKIERGVAFILEPAVEKLLEVAHSTKNRWM FT RLRAAKTLALLAVKSRSGDRVVGEFIEDYLSGDAKRVIPALEFFSYYFNREWDEKTARV FT VLSTLTNHLEKEETRFDALLALEALVRSAPPERARLFIPFIDVLKDIKNSASPEDQKLA FT LRILEEISSKVKLG" FT gene complement(503913..504173) FT /locus_tag="TGAM_0528" FT /note="tg0528" FT CDS complement(503913..504173) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0528" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A468" FT /protein_id="ACS33030.1" FT /translation="MVDMTEELMEILKRKYQFLGTMLESVDLTIRELKRSGDSEEVYNT FT MITFLGEFPTKRMLQIIAEEKNLGIKVKTREDAINVIKLLQ" FT gene complement(504166..504462) FT /locus_tag="TGAM_0529" FT /note="tg0529" FT CDS complement(504166..504462) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0529" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR021609" FT /db_xref="UniProtKB/TrEMBL:C5A469" FT /protein_id="ACS33031.1" FT /translation="MSDPRVGSAMVTATAKEILRRLGRPFEATITAYLNSKYDKGIEII FT EEDPRKFYSALKELFGEFAAKIFIYNLVAELHLPVKSTEIEDLLQILEEYIGG" FT gene complement(504455..505804) FT /locus_tag="TGAM_0530" FT /note="tg0530" FT CDS complement(504455..505804) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0530" FT /product="RecA family AAA ATPase" FT /note="Contains 2 RecA_2 (PS50162) domains, 2 P_Loop FT (SSF52540) domains, 1 Kaic (PF06745) domain and 2 RecA FT (PR00142) domains" FT /db_xref="GOA:C5A470" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004504" FT /db_xref="InterPro:IPR010624" FT /db_xref="InterPro:IPR014774" FT /db_xref="UniProtKB/TrEMBL:C5A470" FT /inference="protein motif:CDD:FlaH, Predicted ATPases FT involved in biogenesis of archaeal flagella [Cell motility FT and secretion / Intracellular trafficking and secretion]" FT /inference="protein motif:CDD:KaiC, KaiC is a circadian FT clock protein primarily found in cyanobacteria KaiC is a FT RecA-like ATPase, having both Walker A and Walker B motifs" FT /inference="protein motif:CDD:RAD55, RecA-superfamily FT ATPases implicated in signal transduction [Signal FT transduction mechanisms]" FT /inference="protein motif:CDD:radB, RadB" FT /inference="protein motif:CDD:RecA, RecA/RadA recombinase FT [DNA replication, recombination, and repair]" FT /inference="protein motif:CDD:recA_like, RecA is a FT bacterial enzyme which has roles in homologous FT recombination, DNA repair, and the induction of the SOS FT response" FT /inference="protein motif:CDD:Sms, Predicted ATP-dependent FT serine protease [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:Sms, Sms (bacterial radA) DNA FT repair protein" FT /inference="protein motif:COG:COG0467 RecA-superfamily FT ATPases implicated in signal transduction; T Signal FT transduction mechanisms" FT /inference="protein motif:FPrintScan:PR01874 DNAREPAIRADA FT InterPro:IPR004504 DNA repair protein RadA GO:Molecular FT Function:damaged DNA binding (GO:0003684), Molecular FT Function:ATP binding (GO:0005524), Biological Process:DNA FT repair (GO:0006281)" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR13682 GLUTAMINE FT SYNTHETASE/DNA REPAIR PROTEIN-RELATED" FT /inference="protein motif:HMMPanther:PTHR13682:SF11 DNA FT REPAIR PROTEIN RAD51 [ARCHAEA]" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:ProfileScan:PS50162 RECA_2 FT InterPro:IPR001553 RecA bacterial DNA recombination FT GO:Molecular Function:DNA binding (GO:0003677), Molecular FT Function:ATP binding (GO:0005524), Biological Process:DNA FT metabolism (GO:0006259), Molecular Function:DNA-dependent FT ATPase activity (GO:0008094)" FT /inference="protein motif:ProfileScan:PS51146 KAIC FT InterPro:IPR010624 Circadian clock protein KaiC" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33032.1" FT /translation="MELIPTGIPGLDKALSGGFSRGTSILIAGNPGTGKTHLAVHVLFN FT NMKKGLKGAYISFAETKRQFYQNAMESGLNFEEAEKKGVFKFYDMLTMPKEEMKDFLDF FT LIQDLVEWKPDIIVFDSITVLGQIFGAAMMRSFLHSIIGRLVNALNSLAILIDEIPYGE FT RRVGFGVEEFVVDGVIVLEMERQREVIKRYLTIPKMRGRYIARSTYEYVITDYGIDVIP FT IPDLRFAERNIQTKERIKTGIPKFDELLGGGFYKGSINLIAGPTGSGKTIFALTIASNM FT AKQGFRVLYMTFEEALGALLGTTKNLGLDGDFKVISLIPEAMTPIQYYALIKRLLRENS FT SEILFIDSISAMQSHMEEEDFIKAIRYLQLLSKEKNITLIMTYLSQNSNLLQSTGFSTL FT MDTITILSYELPSRPGEFLKRYLMVLKARHSEHKAVLRKFKITLGGIEIE" FT gene 505929..506549 FT /locus_tag="TGAM_0531" FT /note="tg0531" FT CDS 505929..506549 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0531" FT /product="SAM-dependent rRNA adenine methyltransferase, FT putative" FT /db_xref="GOA:C5A471" FT /db_xref="InterPro:IPR002052" FT /db_xref="InterPro:IPR007848" FT /db_xref="UniProtKB/TrEMBL:C5A471" FT /inference="protein motif:CDD:COG2263, Predicted RNA FT methylase [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:HemK, Methylase of FT polypeptide chain release factors [Translation, ribosomal FT structure and biogenesis]" FT /inference="protein motif:CDD:PrmA, Ribosomal protein L11 FT methylase [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:PrmA, Ribosomal protein L11 FT methyltransferase (PrmA)" FT /inference="protein motif:CDD:RsmC, 16S RNA G1207 methylase FT RsmC [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:COG:COG2263 Predicted RNA FT methylase; J Translation, ribosomal structure and FT biogenesis" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR13210 FAMILY NOT FT NAMED" FT /inference="protein motif:HMMPfam:PF06325 PrmA FT InterPro:IPR010456 Ribosomal L11 methyltransferase FT GO:Cellular Component:cytoplasm (GO:0005737), Biological FT Process:protein amino acid methylation (GO:0006479), FT Molecular Function:protein methyltransferase activity FT (GO:0008276)" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:ScanRegExp:PS00092 N6_MTASE FT InterPro:IPR002052 N-6 Adenine-specific DNA methylase FT GO:Molecular Function:DNA binding (GO:0003677), Biological FT Process:DNA methylation (GO:0006306), Molecular FT Function:N-methyltransferase activity (GO:0008170)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /protein_id="ACS33033.1" FT /translation="MKKRHLAMLLSKLEGFSEPKPELEQYRTPGNVAAELLWLAHSAGD FT IVEKVVADLGTGTGVLAIGAKLLGAEKVYAVEVDPKALEVAKRNAERSGVEVEFIQADV FT SEFSERVDTVVMNPPFGSQKKGADRPFLLKAFEVSNTVYSIHLAKLEVRSFIERFSADN FT GFTAFRLATVPFEIPAQFFFHRKKLERILVDLYLFRRVPDGKA" FT gene 506536..507867 FT /locus_tag="TGAM_0532" FT /note="tg0532" FT CDS 506536..507867 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0532" FT /product="SAM-dependent tRNA/rRNA cytosine-C5 methylase" FT /db_xref="GOA:C5A472" FT /db_xref="InterPro:IPR001678" FT /db_xref="InterPro:IPR023267" FT /db_xref="UniProtKB/TrEMBL:C5A472" FT /inference="protein motif:BlastProDom:PD005242 FT Q9UZ98_PYRAB_Q9UZ98; InterPro:IPR006174 rRNA subunit FT methyltransferase" FT /inference="protein motif:CDD:Nol1_Nop2_Sun, NOL1/NOP2/sun FT family" FT /inference="protein motif:CDD:Sun, tRNA and rRNA FT cytosine-C5-methylases [Translation, ribosomal structure FT and biogenesis]" FT /inference="protein motif:COG:COG0144 tRNA and rRNA FT cytosine-C5-methylases; J Translation, ribosomal structure FT and biogenesis" FT /inference="protein motif:Gene3D:G3D.1.10.940.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR11078 FT NOL1/NOP2/FMU(SUN) FAMILY/METHYLTRANSFERASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11078:SF1 FT NOL1/NOP2/FMU(SUN) FAMILY" FT /inference="protein motif:HMMPfam:PF01189 Nol1_Nop2_Fmu FT InterPro:IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar FT NOL1/Nop2p" FT /inference="protein motif:HMMTigr:TIGR00446 FT nop2p:NOL1/NOP2/sun family putative RNA met FT InterPro:IPR011023 Nop2p" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:superfamily:SSF48013 FT Antitermination factor NusB" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /protein_id="ACS33034.1" FT /translation="MGKLKLSDRQLYALIEAVKLSEAIKPSQQAKRKAFSRYKIEGWEN FT SKLTGIFYSIQRRLGLIDEVIEELVGVSPLILDPWLRATLRVAVEVAVFRDPNERTLQH FT LKGLAKFLSGRTHPYVGYYYYELLPRVINYVPKLNSEEKRLKWKYLFPEWFIERMHKLL FT GGEAEELLKALNETLPVSLRVNCLKASVEDVEDYLKRRNLRFERSERVETVIRVLDPFN FT PGRLMEKGLALPQEEASAVASLILSPEPGETVVDLAAAPGGKTAHMAELMKNEGKIYAF FT DVDSERIKRMKQILRWAGVEIAEVKKLDGRKAPEFLGEKIADRVLLDAPCTSDGTIAKN FT PELRWRLREKNIPKVVQLQKELIESAWKLLKPGGRLLYSTCSMLSEENEEVVRWFLERH FT DDARLVPLNGPYDEGFLPGTMRAWPHRHRTIGFFYALIEKARVK" FT gene 508299..508478 FT /locus_tag="TGAM_0533" FT /note="tg0533" FT CDS 508299..508478 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0533" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A473" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /protein_id="ACS33035.1" FT /translation="MEDAMKLGRKTGASGFDVLFLACAKKANAKLVTDDKKMYETAVKA FT GIEVELLRELISSP" FT gene complement(508462..509463) FT /gene="cobT" FT /locus_tag="TGAM_0534" FT /note="tg0534" FT CDS complement(508462..509463) FT /codon_start=1 FT /transl_table=11 FT /gene="cobT" FT /locus_tag="TGAM_0534" FT /product="Nicotinate-nucleotide-dimethylbenzimidazole FT (NaMN:DMB)phosphoribosyltransferase (cobT)" FT /db_xref="GOA:C5A474" FT /db_xref="InterPro:IPR002805" FT /db_xref="InterPro:IPR003200" FT /db_xref="UniProtKB/Swiss-Prot:C5A474" FT /inference="protein motif:BlastProDom:PD009438 FT O29963_ARCFU_O29963; InterPro:IPR008281 FT Nicotinate-nucleotide-dimethylbenzimidazole FT phosphoribosyltransferase subtype GO:Molecular FT Function:nicotinate-nucleotide-dimethylbenzimidazole FT phosphoribosyltransferase activity (GO:0008939), Biological FT Process:cobalamin biosynthesis (GO:0009236)" FT /inference="protein motif:BlastProDom:PD014194 FT O57746_PYRHO_O57746; InterPro:IPR002805 Protein of unknown FT function DUF102" FT /inference="protein motif:CDD:CobT, NaMN:DMB FT phosphoribosyltransferase [Coenzyme metabolism]" FT /inference="protein motif:CDD:DBI_PRT, FT Phosphoribosyltransferase" FT /inference="protein motif:COG:COG2038 NaMN:DMB FT phosphoribosyltransferase; H Coenzyme transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF02277 DBI_PRT FT InterPro:IPR003200 FT Nicotinate-nucleotide-dimethylbenzimidazole FT phosphoribosyltransferase" FT /inference="protein motif:HMMTigr:TIGR00303 FT TIGR00303:conserved hypothetical protein T FT InterPro:IPR002805 Protein of unknown function DUF102" FT /inference="protein motif:superfamily:SSF52733 Nicotinate FT mononucleotide:5,6-dimethylbenzimidazole FT phosphoribosyltransferase (CobT) InterPro:IPR003200 FT Nicotinate-nucleotide-dimethylbenzimidazole FT phosphoribosyltransferase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33036.1" FT /translation="MESLFLLVLGNTEISTVPGISVAGATPELTKLTPVADAEYLFHEK FT PLTIDVIPVTPEGHPTPAIITKAARELANFPVLVVRGGTYLAPLVPHVHISDAVGRDFR FT KEPALPEFGDIIKRAKLFGEELNKTPIKELVIGESTPGGTTTAQAVLWALGYEARTSSA FT SPDNPQSLKEKVIAEAFERAGIEKGQLRDNPLEALRQFGDPMMATVIGIALGFRRDIVL FT AGGTQMLAVSALLKALGEDLSRFMIATTKWVANDKSATFIETAKEIGIISYAADLDFSK FT SEFKGLRDYERGYVKEGVGAGGATWLAVKAGFSPEDVSEKVEELYRRLMEMK" FT gene 509518..510969 FT /gene="cobQ" FT /locus_tag="TGAM_0535" FT /note="tg0535" FT CDS 509518..510969 FT /codon_start=1 FT /transl_table=11 FT /gene="cobQ" FT /locus_tag="TGAM_0535" FT /product="Cobyric acid synthase (cobQ)" FT /EC_number="6.3.5.10" FT /db_xref="GOA:C5A475" FT /db_xref="InterPro:IPR002586" FT /db_xref="InterPro:IPR004459" FT /db_xref="InterPro:IPR011698" FT /db_xref="InterPro:IPR017929" FT /db_xref="UniProtKB/Swiss-Prot:C5A475" FT /inference="protein motif:CDD:CbiA, Cobyrinic acid FT a,c-diamide synthase" FT /inference="protein motif:CDD:CobQ, Cobyric acid synthase FT [Coenzyme metabolism]" FT /inference="protein motif:CDD:GATase1_CobQ, Type 1 FT glutamine amidotransferase (GATase1) domain found in FT Cobyric Acid Synthase (CobQ)" FT /inference="protein motif:COG:COG1492 Cobyric acid FT synthase; H Coenzyme transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.880 no FT description" FT /inference="protein motif:HMMPfam:PF01656 CbiA FT InterPro:IPR002586 Cobyrinic acid a,c-diamide synthase FT GO:Biological Process:cobalamin biosynthesis (GO:0009236), FT Molecular Function:cobyrinic acid a,c-diamide synthase FT activity (GO:0042242)" FT /inference="protein motif:HMMPfam:PF07685 GATase_3 FT InterPro:IPR011698 CobB/CobQ-like glutamine FT amidotransferase GO:Molecular Function:catalytic activity FT (GO:0003824), Biological Process:cobalamin biosynthesis FT (GO:0009236)" FT /inference="protein motif:HMMTigr:TIGR00313 cobQ:cobyric FT acid synthase CobQ InterPro:IPR004459 Cobyric acid synthase FT CobQ GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:cobalamin biosynthesis (GO:0009236)" FT /inference="protein motif:superfamily:SSF52317 Class I FT glutamine amidotransferase-like" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33037.1" FT /translation="MGKALMVLGTSSGAGKSLLVTALCRIFSNLGYDVVPFKSQNMSLN FT SAPSIEGGEISRAQYLQAIACRKKPSVRFNPILLKPEGNMRSQVIFMGKPIGSVSAKDY FT MLSRKEELFRKAMKVLDELKERHDLVIIEGAGSPVEINLKDYDIANTRVMLHAKAKGIL FT VTDIDRGGSFASIVGTMELLKPEERDTIIGFVFNKFRGDKSLLEPGFEYLEKRYGKPTL FT GVIPYVEHRLPEEDSLAEFPKVKGELHIQIIKLPHISNFTDFEPLHWANGVDYVTRPEE FT LKGDVIIIPGSKNTVEDLLWLRENGFEDAIIEAHREGSFVVGICGGFQMLGEKIIDTVE FT SKRGEVKGIGLLPAKTVFEKTKRTNHLNAEVLWEPARGMAVEGYEIRFGRSVSERPFSV FT IKAINGAKTFEPEGAIGERAFGTYLHGIFHNFAFTERFLNFLRVEKGLEPVSIERWSIE FT EEIERFAKLVEENIDVERILGELGL" FT gene complement(511175..511714) FT /gene="mobA-1" FT /locus_tag="TGAM_0536" FT /note="tg0536" FT CDS complement(511175..511714) FT /codon_start=1 FT /transl_table=11 FT /gene="mobA-1" FT /locus_tag="TGAM_0536" FT /product="Molybdopterin-guanine dinucleotide biosynthesis FT protein A, putative (mobA)" FT /db_xref="UniProtKB/TrEMBL:C5A476" FT /inference="protein motif:CDD:COG2266, FT GTP:adenosylcobinamide-phosphate guanylyltransferase FT [Coenzyme metabolism]" FT /inference="protein motif:COG:COG2266 FT GTP:adenosylcobinamide-phosphate guanylyltransferase; H FT Coenzyme transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.90.550.10 no FT description" FT /inference="protein motif:superfamily:SSF53448 FT Nucleotide-diphospho-sugar transferases" FT /protein_id="ACS33038.1" FT /translation="MIIIMAGGRSSRIGREKPVLKVGGVPMLLRVYREAEKVGETLVAL FT SKNTPKTRELCLRERIPFVETPGNGYVEDVKWLLHEFGPFISVSADLPFIKASDIARIS FT EAFDRKTSLTGVLPLKLVPKDLKPVVYRGYAIVGLNAVGIEGERFFELNNPLLALNVNT FT PGELKLADKIARLVGR" FT gene 511747..512940 FT /locus_tag="TGAM_0537" FT /note="tg0537" FT CDS 511747..512940 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0537" FT /product="Conserved hypothetical protein, predicted FT polysaccharide hydrolase or cysteinyl-tRNA synthetase" FT /note="Controversial assignement (see PMID:11333988 and FT 14679218); 1 probable transmembrane helix predicted by FT modhmm" FT /db_xref="InterPro:IPR004352" FT /db_xref="InterPro:IPR016062" FT /db_xref="InterPro:IPR016063" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:C5A477" FT /inference="protein motif:CDD:COG2342, Predicted FT extracellular endo alpha-1,4 polygalactosaminidase or FT related polysaccharide hydrolase [Carbohydrate transport FT and metabolism]" FT /inference="protein motif:CDD:DUF297, TM1410 FT hypothetical-related protein" FT /inference="protein motif:COG:COG2342 Predicted FT extracellular endo alpha-1,4 polygalactosaminidase or FT related polysaccharide hydrolase; G Carbohydrate transport FT and metabolism" FT /inference="protein motif:FPrintScan:PR01545 THEMAYE10DUF FT InterPro:IPR004352 TM1410 hypothetical-related protein FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:HMMPfam:PF03537 DUF297 FT InterPro:IPR004352 TM1410 hypothetical-related protein FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:HMMTigr:TIGR01370 cysRS:possible FT cysteinyl-tRNA synthetase InterPro:IPR004352 TM1410 FT hypothetical-related protein GO:Molecular FT Function:molecular function unknown (GO:0005554)" FT /inference="protein motif:superfamily:SSF51445 FT (Trans)glycosidases" FT /protein_id="ACS33039.1" FT /translation="MRLRLTMRYWTIITILMILLAFALACISQGDNVQTPSLTPSMTQN FT ATSSVHTSTSAMEMTLTSSRAGWVENSTQTPSSPRLSDTASPLGGSSVNLQNGTSTLSP FT AGGLNSTENSESLSLSSVRSWACWLQNASPEVIAESGFDLVVMDYSRDGSDETAYTREG FT IEGIKRAGIIPIAYISIGEAEDYRFYWNESWKENPPAWLGPENPDWEGNYAVRYWDEEW FT KEIVFRYLDRIIAQGFMGVYLDKVDEYWFWAESYNESWTAERMIELILEIANYTRSKAG FT RDFIIIPQNGEYLLEYDNGTLLATVSGWASEDVFYNGLEPSPWTAEKVPPLKKVVNAGK FT PVFVVDYVDDGTGSEENLARILDFIDKARRAGFIPYATFEDRELDRLDVIPGIQPPK" FT gene complement(512925..513626) FT /gene="cobS" FT /locus_tag="TGAM_0538" FT /note="tg0538" FT CDS complement(512925..513626) FT /codon_start=1 FT /transl_table=11 FT /gene="cobS" FT /locus_tag="TGAM_0538" FT /product="Cobalamin (5'-phosphate) synthase (cobS)" FT /EC_number="2.7.8.26" FT /note="7 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A478" FT /db_xref="InterPro:IPR003805" FT /db_xref="UniProtKB/Swiss-Prot:C5A478" FT /inference="protein motif:CDD:CobS, Cobalamin-5-phosphate FT synthase" FT /inference="protein motif:CDD:CobS, Cobalamin-5-phosphate FT synthase [Coenzyme metabolism]" FT /inference="protein motif:COG:COG0368 Cobalamin-5-phosphate FT synthase; H Coenzyme transport and metabolism" FT /inference="protein motif:HMMPfam:PF02654 CobS FT InterPro:IPR003805 Cobalamin-5-phosphate synthase CobS FT GO:Molecular Function:cobalamin 5'-phosphate synthase FT activity (GO:0008818), Biological Process:cobalamin FT biosynthesis (GO:0009236)" FT /inference="protein motif:HMMTigr:TIGR00317 cobS:cobalamin FT 5'-phosphate synthase InterPro:IPR003805 FT Cobalamin-5-phosphate synthase CobS GO:Molecular FT Function:cobalamin 5'-phosphate synthase activity FT (GO:0008818), Biological Process:cobalamin biosynthesis FT (GO:0009236)" FT /protein_id="ACS33040.1" FT /translation="MRNLLPFFTRIPVKGDFERVRNELWALPLLAPLTSALATLVLYLE FT LPLSNVLAILALYFTTGLLHLDGLADWADGVMVKGDRERKIKAMKDLNTGIAGVFAVVM FT VFLLQVYSLPLLPFYALYLAELNSKFAMLLALATRKPLGQGLGAYFMEGMNGRQLTLGT FT ALYLLLLLPVAYIEPRSISSLLGLLAGAYVIRLSLRNFGGLNGDCIGAVAEITRAGALL FT GMAVVWVYFGG" FT gene complement(513629..514039) FT /gene="pgpA" FT /locus_tag="TGAM_0539" FT /note="tg0539" FT CDS complement(513629..514039) FT /codon_start=1 FT /transl_table=11 FT /gene="pgpA" FT /locus_tag="TGAM_0539" FT /product="Phosphatidylglycerophosphatase A (PgpA)" FT /EC_number="3.1.3.27" FT /db_xref="GOA:C5A479" FT /db_xref="InterPro:IPR007686" FT /db_xref="InterPro:IPR017577" FT /db_xref="UniProtKB/TrEMBL:C5A479" FT /inference="protein motif:CDD:DUF64, Protein of unknown FT function DUF64" FT /inference="protein motif:CDD:PgpA, FT Phosphatidylglycerophosphatase A and related proteins FT [Lipid metabolism]" FT /inference="protein motif:COG:COG1267 FT Phosphatidylglycerophosphatase A and related proteins; I FT Lipid transport and metabolism" FT /inference="protein motif:HMMPfam:PF01892 DUF64 FT InterPro:IPR002752 Protein of unknown function DUF64" FT /protein_id="ACS33041.1" FT /translation="MTPKELLSRLESKGITLEKMLDTALELYIGDEREKVGERLRGLML FT RYLSDVNVQALLLSALLLEENFKVEGDPVNLVADELIGINIAELIGGKMALFNFFYYDT FT RKPGILAELPPFLDDAIGGFIAGCMTRLFEEV" FT gene complement(514036..514467) FT /locus_tag="TGAM_0540" FT /note="tg0540" FT CDS complement(514036..514467) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0540" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR006596" FT /db_xref="InterPro:IPR019298" FT /db_xref="UniProtKB/TrEMBL:C5A480" FT /inference="protein motif:CDD:COG5378, Predicted FT nucleotide-binding protein [General function prediction FT only]" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /protein_id="ACS33042.1" FT /translation="MEVVLDYNVVFSALYNRGVAYKLFMLNHVTKDVEFLVPGYFWEEV FT ERKKDRLARLTRLTYEDFEFILRIIKSQTITMPEHVVKIGIEEALSLSPDPKDIPYVAL FT ALALNLPLVTGDLKLKNAIRDRIVVYSPSELLKLMGGSV" FT gene complement(514468..514716) FT /locus_tag="TGAM_0541" FT /note="tg0541" FT CDS complement(514468..514716) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0541" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A481" FT /protein_id="ACS33043.1" FT /translation="MGGDRMGEIVLRITVPEGWSEEMRKALERRLVVDVARELQKRIEE FT AKRFEEIVRSIEIEDEEEAKALEDEIAEEIARRYGVV" FT gene complement(514736..515377) FT /locus_tag="TGAM_0542" FT /note="tg0542" FT CDS complement(514736..515377) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0542" FT /product="N-type ATP pyrophosphatase, putative" FT /db_xref="InterPro:IPR002761" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/TrEMBL:C5A482" FT /inference="protein motif:CDD:Alpha_ANH_like_IV, This is a FT subfamily of Adenine nucleotide alpha hydrolases FT superfamily" FT /inference="protein motif:CDD:ATP_bind_4, ATP-binding FT region" FT /inference="protein motif:CDD:COG2102, Predicted ATPases of FT PP-loop superfamily [General function prediction only]" FT /inference="protein motif:COG:COG2102 Predicted ATPases of FT PP-loop superfamily; R General function prediction only" FT /inference="protein motif:HMMPanther:PTHR12196 FAMILY NOT FT NAMED" FT /inference="protein motif:HMMPfam:PF01902 ATP_bind_4 FT InterPro:IPR002761 Protein of unknown function DUF71, FT ATP-binding region" FT /inference="protein motif:HMMTigr:TIGR00290 FT MJ0570_dom:MJ0570-related uncharacterized FT InterPro:IPR002761 Protein of unknown function DUF71, FT ATP-binding region" FT /inference="protein motif:superfamily:SSF52402 Adenine FT nucleotide alpha hydrolases-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33044.1" FT /translation="MRGVAFFSGGKDGLYAVHLAEKNGIEVPYLLALKTTIGLSPHWEN FT FSALKTLAEAMGKELFTFDMSRGSKALAEFIGSLDVDYLIAGDVLLEDHLRWIERLAEG FT AGVKPLEPLWGRDTRELAEEILNAGFEHAIIAVNREKLGKEWLGYTFRSLDDLELFLEK FT NPGIDPVGEFGEFHTVVLASPLFKGRFALEIISTEESERYHWVRSELRKR" FT gene 515402..516166 FT /locus_tag="TGAM_0543" FT /note="tg0543" FT CDS 515402..516166 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0543" FT /product="Uracil-DNA glycosylase superfamily protein" FT /db_xref="InterPro:IPR005122" FT /db_xref="UniProtKB/TrEMBL:C5A483" FT /inference="protein motif:COG:COG1573 Uracil-DNA FT glycosylase; L Replication, recombination and repair" FT /inference="protein motif:Gene3D:G3D.3.40.470.10 no FT description" FT /inference="protein motif:HMMPfam:PF03167 UDG FT InterPro:IPR005122 Uracil-DNA glycosylase superfamily" FT /inference="protein motif:superfamily:SSF52141 DNA FT glycosylase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33045.1" FT /translation="MELLSIMLIRIDELERVGDVYVNPRNLRAKPLLLKTWRDFLSLDE FT KTYGIYARTIYNPRERFLVTDEFSEARAIDLSALYRSFLMDAEYFCGGENLRYQLQVGE FT FEGLPFANGWTGSKVVLVGEAPGRRGCGKTGVCFYRDASGMLLRKTLFSLGINPDFVYI FT TNAVKCNPPNNRLSRVPEGAYELLARELEILRPGTIFALGRTAERALKELGFEVEYLRH FT PAWYVRRGVHEPNDEMLAEYAKIREAFGEWTP" FT gene 516154..517038 FT /gene="cobD" FT /locus_tag="TGAM_0544" FT /note="tg0544" FT CDS 516154..517038 FT /codon_start=1 FT /transl_table=11 FT /gene="cobD" FT /locus_tag="TGAM_0544" FT /product="Cobalamin biosynthesis protein (cobD)" FT /EC_number="6.3.1.10" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A484" FT /db_xref="InterPro:IPR004485" FT /db_xref="UniProtKB/TrEMBL:C5A484" FT /inference="protein motif:CDD:CbiB, Cobalamin biosynthesis FT protein CobD/CbiB [Coenzyme metabolism]" FT /inference="protein motif:CDD:CobD_Cbib, CobD/Cbib protein" FT /inference="protein motif:COG:COG1270 Cobalamin FT biosynthesis protein CobD/CbiB; H Coenzyme transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF03186 CobD_Cbib FT InterPro:IPR004485 Cobalamin (vitamin B12) biosynthesis FT CbiB GO:Biological Process:cobalamin biosynthesis FT (GO:0009236), Cellular Component:integral to membrane FT (GO:0016021)" FT /inference="protein motif:HMMTigr:TIGR00380 cobD:cobalamin FT biosynthesis protein CobD InterPro:IPR004485 Cobalamin FT (vitamin B12) biosynthesis CbiB GO:Biological FT Process:cobalamin biosynthesis (GO:0009236), Cellular FT Component:integral to membrane (GO:0016021)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33046.1" FT /translation="MDALIVFLLALLWDLLLGEPPVELHPVVWFGRVAGFLDGKWKRRG FT PLPDFLAGALTALLVIAFALALSLLPLYLPFPLNYALAVYLLKSSFAMRSLHEHIARTI FT TEDINEKRKAVSMIVSRDVKNLDESHLNSASIESLAENLNDSVIAPLFYFLLFGLPGAL FT FYRAVNTIDAMLGYRNERYEFFGKFSARLDDVLNFIPARLTVLLYIPLGGLKVLRHYHL FT AKFKINSDKPMSAMSAVLGVWLEKPGVYRFPGREPKNKDIKRALKVYWFVVAEWVGIVL FT LLLAKGVCPCWSP" FT gene 517035..517985 FT /gene="hisC-1" FT /locus_tag="TGAM_0545" FT /note="tg0545" FT CDS 517035..517985 FT /codon_start=1 FT /transl_table=11 FT /gene="hisC-1" FT /locus_tag="TGAM_0545" FT /product="Histidinol-phosphate aminotransferase (hisC)" FT /EC_number="2.6.1.9" FT /db_xref="GOA:C5A485" FT /db_xref="InterPro:IPR001917" FT /db_xref="InterPro:IPR004839" FT /db_xref="InterPro:IPR015421" FT /db_xref="InterPro:IPR015422" FT /db_xref="InterPro:IPR015424" FT /db_xref="UniProtKB/TrEMBL:C5A485" FT /inference="protein motif:CDD:Aminotran_1_2, FT Aminotransferase class I and II" FT /inference="protein motif:CDD:ARO8, Transcriptional FT regulators containing a DNA-binding HTH domain and an FT aminotransferase domain (MocR family) and their eukaryotic FT orthologs [Transcription / Amino acid transport and FT metabolism]" FT /inference="protein motif:CDD:COG0436, FT Aspartate/tyrosine/aromatic aminotransferase [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:HisC, FT Histidinol-phosphate/aromatic aminotransferase and cobyric FT acid decarboxylase [Amino acid transport and metabolism]" FT /inference="protein motif:COG:COG0079 FT Histidinol-phosphate/aromatic aminotransferase and cobyric FT acid decarboxylase; E Amino acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.640.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11751 FT PLP-DEPENDENT AMINOTRANSFERASES" FT /inference="protein motif:HMMPanther:PTHR11751:SF49 FT HISTIDINOL-PHOSPHATE AMINOTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00155 Aminotran_1_2 FT InterPro:IPR004839 Aminotransferase, class I and II FT GO:Biological Process:biosynthesis (GO:0009058), Molecular FT Function:transferase activity, transferring nitrogenous FT groups (GO:0016769)" FT /inference="protein motif:ScanRegExp:PS00599 FT AA_TRANSFER_CLASS_2 InterPro:IPR001917 Aminotransferase, FT class-II GO:Biological Process:metabolism (GO:0008152), FT Molecular Function:transferase activity (GO:0016740)" FT /inference="protein motif:superfamily:SSF53383 FT PLP-dependent transferases" FT /protein_id="ACS33047.1" FT /translation="MKFSTYHGGAREEGLLDFSASLNPYPPGWLDEMFKRAKEISNRYP FT YYERLEEELEGLVGEPLIITAGITEALYLLGILALRGKKAIIPEHTYGEYERVSWIFGA FT RVVKGPNEPEKLAELVERNSVVFFCNPNNPDGRFYSVRELKPLLDAVEDRGALLVLDEA FT FIDFVKKPDSPKGENIVKLRTFTKSYGLPGVRVGYVLGFEEAFRSVRMPWSIGSTGVAF FT LEFLIEDGFEHLRRTMPLIWREKERIEKALGVKSDANFFIKRVGNAEGFVDAMKKRGIL FT VRNCESFGLPEYIRFSVRKPEENEMLIRAFKSMRV" FT gene complement(518067..518783) FT /locus_tag="TGAM_0546" FT /note="tg0546" FT CDS complement(518067..518783) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0546" FT /product="Hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A486" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33048.1" FT /translation="MIRKIVPLLLLFVVLSAGCLGHEETKTNFSIKINAVPFNPGINVT FT AVMFHVHAKFIGYKHVTVNYSYPAILIKTSPDVLNLSAFKLSDDVYMLPYYSFKNPENL FT ASILVRMKNGSTTSVDIRVEGTPKKSIEMTINYEVKKNGTHYLVRPIGWSVKKLTVWNE FT TFNVTLVIQRPIQIANAPTVELKNDTYLLPEICKTKSGSVTAIYKYSVGDVYVIGPAGE FT GFVGKVYFPCEKMAGK" FT gene 518996..519736 FT /locus_tag="TGAM_0547" FT /note="tg0547" FT CDS 518996..519736 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0547" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF364 family, contains NAD(P)-binding FT Rossmann-fold domain (SSF51735)" FT /db_xref="InterPro:IPR007161" FT /db_xref="UniProtKB/TrEMBL:C5A487" FT /inference="protein motif:CDD:COG2014, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:DUF364, Domain of unknown FT function (DUF364)" FT /inference="protein motif:COG:COG2014 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF04016 DUF364 FT InterPro:IPR007161 Protein of unknown function DUF364" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33049.1" FT /translation="MLLKVIKRRALTLSSGLELVDFGFALPYTWVLVEGGEGRALGVAM FT TLPEEIQRYTNSIGEPSVEEFIERVDSLNVIERTLGLAAINAVSQYHMDLSGAEWVDVL FT DLIPENAGKVALIGNMPPLVRELREKGYELYVFERNPKLWDRETLSDVLEYHLLPEMDA FT VIASASCLVNGTIDMLLERAKRAKIFVLTGPTGQLLPEFLRGTGVTHLASMKVVDIKKA FT ILGLKLGSFKGFEKGNRKYVVEVG" FT gene complement(519739..520266) FT /locus_tag="TGAM_0548" FT /note="tg0548" FT CDS complement(519739..520266) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0548" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR017139" FT /db_xref="InterPro:IPR019254" FT /db_xref="UniProtKB/TrEMBL:C5A488" FT /inference="protein motif:CDD:COG4344, Uncharacterized FT protein conserved in archaea [Function unknown]" FT /inference="protein motif:COG:COG4344 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /protein_id="ACS33050.1" FT /translation="MSRGNTRGERPGSYRGFELLPVHLYVLAHLKKAGVDYAKMMSKMS FT GLPLELIEDSINDLLELGLIERDSGSAIKRSRARFKKAFEVHKHHTYYRLSREGELFVR FT SIDERWLKRYFNALLPNGWKVVNALAESRDVKGVTRIVKIKDDTLEELKILRFVTERGR FT KTEFFRRLWEFL" FT gene complement(520259..520645) FT /gene="icmt" FT /locus_tag="TGAM_0549" FT /note="tg0549" FT CDS complement(520259..520645) FT /codon_start=1 FT /transl_table=11 FT /gene="icmt" FT /locus_tag="TGAM_0549" FT /product="Protein-S-isoprenylcysteine O-methyltransferase, FT putative (icmt)" FT /EC_number="2.1.1.100" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A489" FT /db_xref="InterPro:IPR007269" FT /db_xref="UniProtKB/TrEMBL:C5A489" FT /inference="protein motif:COG:COG2020 Putative FT protein-S-isoprenylcysteine methyltransferase; O FT Posttranslational modification, protein turnover, FT chaperones" FT /protein_id="ACS33051.1" FT /translation="MRFWGIEPRVALFAFLYALLAFYLNFALGLQALRLPRMGAILVIA FT GVALWFICYLQVSRAYREGKLLTKGCYSRVRHPIYSIWGLLIIPGFSLVIGGFMLGLPA FT IYWFAVVRFIGDEEKALEERFGDE" FT gene complement(520649..521056) FT /locus_tag="TGAM_0550" FT /note="tg0550" FT CDS complement(520649..521056) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0550" FT /product="Dinitrogenase iron-molybdenum cofactor, NIF B/Y/X FT related" FT /note="Not matching with COG1433" FT /db_xref="InterPro:IPR003731" FT /db_xref="UniProtKB/TrEMBL:C5A490" FT /inference="protein motif:CDD:Nitro_FeMo-Co, Dinitrogenase FT iron-molybdenum cofactor" FT /inference="protein motif:HMMPfam:PF02579 Nitro_FeMo-Co FT InterPro:IPR003731 Dinitrogenase iron-molybdenum cofactor FT biosynthesis" FT /inference="protein motif:superfamily:SSF53146 FT MTH1175-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33052.1" FT /translation="MRCLKVAFGMEDDEHLIDAHYGDSEFFAIYDVCEDGSVRLIEKRP FT NRAKDFEEEDEGHGDPRKFKAVVGQLLDVDVLAAFRMGPNFLRIRDKTNKVAFFTRTRD FT LKLALQRVLENFDELWEQVQTKKAEKPPIEE" FT gene complement(521112..521603) FT /locus_tag="TGAM_0551" FT /note="tg0551" FT CDS complement(521112..521603) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0551" FT /product="Conserved hypothetical protein" FT /note="Possibly related to ferritin/ribonucleotide FT reductase-like protein" FT /db_xref="GOA:C5A491" FT /db_xref="InterPro:IPR003251" FT /db_xref="InterPro:IPR009078" FT /db_xref="InterPro:IPR012347" FT /db_xref="UniProtKB/TrEMBL:C5A491" FT /inference="protein motif:Gene3D:G3D.1.20.120.190 no FT description InterPro:IPR012347 Ferritin-related" FT /inference="protein motif:HMMPfam:PF02915 Rubrerythrin FT InterPro:IPR003251 Rubrerythrin GO:Biological FT Process:electron transport (GO:0006118), Molecular FT Function:metal ion binding (GO:0046872)" FT /inference="protein motif:superfamily:SSF47240 FT Ferritin-like InterPro:IPR009078 Ferritin/ribonucleotide FT reductase-like" FT /protein_id="ACS33053.1" FT /translation="MLVVVMKALERIEIRKAEVYRALLPLVPKDFKDDLKLLANHAERN FT AKLLREVDVSPNTRGMKEVEVALGFLEKALTDPEATVEDYYRYAIDAEKATAKLYSELS FT MKAKSEKTRRLFRWLAEISREHAEILRRHLEMWEFIQESVEDDEIPEDLIEQWFEDIDL FT " FT gene 521774..522382 FT /locus_tag="TGAM_0552" FT /note="tg0552" FT CDS 521774..522382 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0552" FT /product="Dinitrogenase iron-molybdenum cofactor, NIF B/Y/X FT related" FT /db_xref="InterPro:IPR003731" FT /db_xref="UniProtKB/TrEMBL:C5A492" FT /inference="protein motif:CDD:COG1433, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:MTH1175, This uncharacterized FT conserved protein belongs to a family of iron-molybdenum FT cluster-binding proteins that includes NifX, NifB, and FT NifY, all of which are involved in the synthesis of an FT iron-molybdenum cofactor (FeMo-co) that binds the active FT site of the dinitrogenase enzyme" FT /inference="protein motif:CDD:NifX_NifB, This CD represents FT a family of iron-molybdenum cluster-binding proteins that FT includes NifB, NifX, and NifY, all of which are involved in FT the synthesis of an iron-molybdenum cofactor (FeMo-co) that FT binds the active site of the dinitrogenase enzyme" FT /inference="protein motif:CDD:Nitro_FeMo-Co, Dinitrogenase FT iron-molybdenum cofactor" FT /inference="protein motif:COG:COG1433 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF02579 Nitro_FeMo-Co FT InterPro:IPR003731 Dinitrogenase iron-molybdenum cofactor FT biosynthesis" FT /inference="protein motif:superfamily:SSF53146 FT MTH1175-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33054.1" FT /translation="MRIAIPTNGGGLEDTVAPVFARAPAFAIIDVEGDEVKNVRVIQNP FT AANAAGGAGPLAVQTLINEGVEAIVAPQVGPNALGAIQAAGIKLYQVAPGTPVEEAVKA FT VTSGSAPSTTAPAPAYGPYPAAPATPVTPAAPAYPATPAYPAYPAYGFGPGWGRGWGRG FT RGWGRGWGRGGRGWGARLGYCPWTGRPSRRTLRWLYGWW" FT gene 522415..522651 FT /locus_tag="TGAM_0553" FT /note="tg0553" FT CDS 522415..522651 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0553" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A493" FT /protein_id="ACS33055.1" FT /translation="MPRGMGRGYGRHFGGPYPGYRFFPFRGLYGLLDLIILILMLYILF FT KLFLVASGYVVALVILWLIWSALRPGRGFFGPW" FT gene 522716..522904 FT /locus_tag="TGAM_0554" FT /note="tg0554" FT CDS 522716..522904 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0554" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A494" FT /protein_id="ACS33056.1" FT /translation="MRGPFPDQITVKRSEMLAEEKQSKFLHEGEELRQYSTLETVVIVI FT LGLLVLGFVIFTLRNYL" FT gene complement(522958..524298) FT /gene="sufBD-1" FT /locus_tag="TGAM_0555" FT /note="tg0555" FT CDS complement(522958..524298) FT /codon_start=1 FT /transl_table=11 FT /gene="sufBD-1" FT /locus_tag="TGAM_0555" FT /product="Fe-S cluster containing protein, SufBD related FT (SufBD)" FT /db_xref="GOA:C5A495" FT /db_xref="InterPro:IPR000825" FT /db_xref="UniProtKB/TrEMBL:C5A495" FT /inference="protein motif:CDD:UPF0051, Uncharacterized FT protein family (UPF0051)" FT /inference="protein motif:COG:COG0719 ABC-type transport FT system involved in Fe-S cluster assembly, permease FT component; O Posttranslational modification, protein FT turnover, chaperones" FT /inference="protein motif:HMMPfam:PF01458 UPF0051 FT InterPro:IPR000825 SufBD GO:Molecular Function:molecular FT function unknown (GO:0005554)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33057.1" FT /translation="MTETITMSDAKAIIENQIEELARRNREPEWMTRIRYKALEAFERA FT PLNDPVISEERLLQFIAKPEIEGLPENIESLDDLPPEMKALLDRLGISEVEQKYIAGLA FT VQTDTGVIYNQFLQEWAKKGLIVLPTEEAVRKYPDLVKEHFLKLFRVDESKLTAYHTAV FT WNGGIFLYVKEGLKVPFPLHLFFLIQESALAQAPHIIIIAEKNTEFHLIEGCTAPILVK FT HSLHLDMTEAYFHEGAKGQLTVLQNWPEYVHTRPMTRAKVGKGARFINTTVGLGTGKSN FT VANPKYWVEENGYIELNGILLGQKDWFVDLGGEMYLQGKGAGGINASKAVIMDESTVIT FT RGIIRAEAPKTKGHISCDALLLSDKATMETYPGLVSKVDDAELSHEAAIGKIREEELFY FT LMSRGLDEEKATQLIVKGFLEPMLKDIPMEFLVEIRKIIELAVSGGM" FT gene complement(524295..525035) FT /gene="sufC" FT /locus_tag="TGAM_0556" FT /note="tg0556" FT CDS complement(524295..525035) FT /codon_start=1 FT /transl_table=11 FT /gene="sufC" FT /locus_tag="TGAM_0556" FT /product="Fe-S cluster assembly ATPase (SufC)" FT /db_xref="GOA:C5A496" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010230" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:C5A496" FT /inference="protein motif:BlastProDom:PD000006 FT O50092_PYRHO_O50092; InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:CDD:AbcC, ABC-type metal ion FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ABCC_ATM1_transporter, ATM1 FT is an ABC transporter that is expressed in the FT mitochondria" FT /inference="protein motif:CDD:ABCC_bacteriocin_exporters, FT ABC-type bacteriocin exporters" FT /inference="protein motif:CDD:ABCC_cytochrome_bd, The CYD FT subfamily implicated in cytochrome bd biogenesis" FT /inference="protein motif:CDD:ABCC_Glucan_exporter_like, FT Glucan exporter ATP-binding protein" FT /inference="protein motif:CDD:ABCC_Hemolysin, The FT ABC-transporter hemolysin B is a central component of the FT secretion machinery that translocates the toxin, hemolysin FT A, in a Sec-independent fashion across both membranes of E" FT /inference="protein motif:CDD:ABCC_MRP_domain1, Domain 1 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_domain2, Domain 2 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_Like, The MRP FT (Mutidrug Resistance Protein)-like transporters are FT involved in drug, peptide, and lipid export" FT /inference="protein motif:CDD:ABCC_MsbA, MsbA is an FT essential ABC transporter, closely related to eukaryotic FT MDR proteins" FT /inference="protein motif:CDD:ABCC_NFT1, Domain 2 of NFT1 FT (New full-length MRP-type transporter 1)" FT /inference="protein motif:CDD:ABCC_Protease_Secretion, This FT family represents the ABC component of the protease FT secretion system PrtD, a 60-kDa integral membrane protein FT sharing 37% identity with HlyB, the ABC component of the FT alpha-hemolysin secretion pathway, in the C-terminal FT domain" FT /inference="protein motif:CDD:ABCC_TAP, TAP, the FT Transporter Associated with Antigen Processing" FT /inference="protein motif:CDD:ABCG_EPDR, ABCG transporters FT are involved in eye pigment (EP) precursor transport, FT regulation of lipid-trafficking mechanisms, and pleiotropic FT drug resistance (DR)" FT /inference="protein motif:CDD:ABCG_White, The White FT subfamily represents ABC transporters homologous to the FT Drosophila white gene, which acts as a dimeric importer for FT eye pigment precursors" FT /inference="protein motif:CDD:ABC_ATPase, ABC (ATP-binding FT cassette) transporter nucleotide-binding domain" FT /inference="protein motif:CDD:ABC_BcrA_bacitracin_resist, FT The BcrA subfamily represents ABC transporters involved in FT peptide antibiotic resistance" FT /inference="protein motif:CDD:ABC_Carb_Monos_I, This family FT represents the domain I of the carbohydrate uptake proteins FT that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Monos_II, This FT family represents domain II of the carbohydrate uptake FT proteins that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Solutes_like, ABC FT Carbohydrate and Solute Transporters-like subgroup" FT /inference="protein motif:CDD:ABC_CcmA_heme_exporter, CcmA, FT the ATP-binding component of the bacterial CcmAB FT transporter" FT /inference="protein motif:CDD:ABC_Class3, This class is FT comprised of all BPD (Binding Protein Dependent) systems FT that are largely represented in archaea and eubacteria and FT are primarily involved in scavenging solutes from the FT environment" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain1, FT Domain I of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain2, FT Domain II of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_CysA_sulfate_importer, FT Part of the ABC transporter complex cysAWTP involved in FT sulfate import" FT /inference="protein motif:CDD:ABC_DrrA, DrrA is the FT ATP-binding protein component of a bacterial exporter FT complex that confers resistance to the antibiotics FT daunorubicin and doxorubicin" FT /inference="protein motif:CDD:ABC_drug_resistance_like, FT ABC-type multidrug transport system, ATPase component" FT /inference="protein motif:CDD:ABC_DR_subfamily_A, This FT family of ATP-binding proteins belongs to a multisubunit FT transporter involved in drug resistance (BcrA and DrrA), FT nodulation, lipid transport, and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_FeS_Assembly, ABC-type FT transport system involved in Fe-S cluster assembly, ATPase FT component" FT /inference="protein motif:CDD:ABC_FtsE_transporter, FtsE is FT a hydrophilic nucleotide-binding protein that binds FtsX to FT form a heterodimeric ATP-binding cassette (ABC)-type FT transporter that associates with the bacterial inner FT membrane" FT /inference="protein motif:CDD:ABC_HisP_GlnQ_permeases, HisP FT and GlnQ are the ATP-binding components of the bacterial FT periplasmic histidine and glutamine permeases, repectively" FT /inference="protein FT motif:CDD:ABC_Iron-Siderophores_B12_Hemin, ABC FT transporters, involved in the uptake of siderophores, heme, FT and vitamin B12, are widely conserved in bacteria and FT archaea" FT /inference="protein motif:CDD:ABC_KpsT_Wzt, ABC_KpsT_Wzt FT The KpsT/Wzt ABC transporter subfamily is involved in FT extracellular polysaccharide export" FT /inference="protein motif:CDD:ABC_MalK_N, The N-terminal FT ATPase domain of the maltose transporter, MalK" FT /inference="protein motif:CDD:ABC_Metallic_Cations, ABC FT component of the metal-type transporters" FT /inference="protein FT motif:CDD:ABC_MetN_methionine_transporter, MetN (also known FT as YusC) is an ABC-type transporter encoded by metN of the FT metNPQ operon in Bacillus subtilis that is involved in FT methionine transport" FT /inference="protein motif:CDD:ABC_MJ0796_Lo1CDE_FtsE, This FT family is comprised of MJ0796 ATP-binding cassette, FT macrolide-specific ABC-type efflux carrier (MacAB), and FT proteins involved in cell division (FtsE), and release of FT liporoteins from the cytoplasmic membrane (LolCDE)" FT /inference="protein motif:CDD:ABC_Mj1267_LivG_branched, The FT Mj1267/LivG ABC transporter subfamily is involved in the FT transport of the hydrophobic amino acids leucine, FT isoleucine and valine" FT /inference="protein motif:CDD:ABC_ModC_like, Archeal FT protein closely related to ModC" FT /inference="protein FT motif:CDD:ABC_ModC_molybdenum_transporter, ModC is an FT ABC-type transporter and the ATPase component of a FT molybdate transport system that also includes the FT periplasmic binding protein ModA and the membrane protein FT ModB" FT /inference="protein motif:CDD:ABC_MTABC3_MDL1_MDL2, MTABC3 FT (also known as ABCB6) is a mitochondrial ATP-binding FT cassette protein involved in iron homeostasis and one of FT four ABC transporters expressed in the mitochondrial inner FT membrane, the other three being MDL1(ABC7), MDL2, and ATM1" FT /inference="protein motif:CDD:ABC_NatA_like, Similar in FT sequence to NatA, this is the ATPase component of a FT bacterial ABC-type Na+ transport system called NatAB, which FT catalyzes ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled to proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NatA_sodium_exporter, FT NatA is the ATPase component of a bacterial ABC-type Na+ FT transport system called NatAB, which catalyzes FT ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NikE_OppD_transporters, FT The ABC transporter subfamily specific for the transport of FT dipeptides, oligopeptides (OppD), and nickel (NikDE)" FT /inference="protein motif:CDD:ABC_NrtD_SsuB_transporters, FT NrtD and SsuB are the ATP-binding subunits of the bacterial FT ABC-type nitrate and sulfonate transport systems, FT respectively" FT /inference="protein motif:CDD:ABC_OpuCA_Osmoprotection, FT OpuCA is a the ATP binding component of a bacterial solute FT transporter that serves a protective role to cells growing FT in a hyperosmolar environment" FT /inference="protein motif:CDD:ABC_Org_Solvent_Resistant, FT ABC (ATP-binding cassette) transport system involved in FT resistant to organic solvents" FT /inference="protein motif:CDD:ABC_PDR_domain1, The FT pleiotropic drug resistance (PDR) family of ATP-binding FT cassette (ABC) transporters" FT /inference="protein motif:CDD:ABC_PhnC_transporter, FT ABC-type phosphate/phosphonate transport system" FT /inference="protein motif:CDD:ABC_PotA_N, PotA is an FT ABC-type transporter and the ATPase component of the FT spermidine/putrescine-preferential uptake system consisting FT of PotA, -B, -C, and -D" FT /inference="protein motif:CDD:ABC_Pro_Gly_Bertaine, This FT family comprises the glycine betaine/L-proline ATP binding FT subunit in bacteria and its equivalents in archaea" FT /inference="protein FT motif:CDD:ABC_PstB_phosphate_transporter, Phosphate uptake FT is of fundamental importance in the cell physiology of FT bacteria because phosphate is required as a nutrient" FT /inference="protein motif:CDD:ABC_putative_ATPase, This FT subfamily is involved in drug resistance, nodulation, lipid FT transport, and bacteriocin and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_subfamily_A, The ABCA FT subfamily mediates the transport of a variety of lipid FT compounds" FT /inference="protein FT motif:CDD:ABC_ThiQ_thiamine_transporter, ABC-type thiamine FT tranport system" FT /inference="protein motif:CDD:ABC_TM1139_LivF_branched, FT LivF (TM1139) is part of the LIV-I bacterial ABC-type FT two-component transport system that imports neutral, FT branched-chain amino acids" FT /inference="protein motif:CDD:ABC_tran, ABC transporter" FT /inference="protein motif:CDD:ABC_YhbG, The ABC FT transporters belonging to the YhbG family are similar to FT members of the Mj1267_LivG family, which is involved in the FT transport of branched-chain amino acids" FT /inference="protein motif:CDD:AppF, ABC-type oligopeptide FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ArpD, ABC-type FT protease/lipase transport system, ATPase and permease FT components [General function prediction only]" FT /inference="protein motif:CDD:ArtP, ABC-type arginine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ATM1, ABC-type transport FT system involved in Fe-S cluster assembly, permease and FT ATPase components [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:BtuD, ABC-type cobalamin FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:CbiO, ABC-type cobalt FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:CcmA, ABC-type multidrug FT transport system, ATPase component [Defense mechanisms]" FT /inference="protein motif:CDD:CcmA, ABC-type transport FT system involved in cytochrome c biogenesis, ATPase FT component [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:CeuD, ABC-type enterochelin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG1123, ATPase components of FT various ABC-type transport systems, contain duplicated FT ATPase [General function prediction only]" FT /inference="protein motif:CDD:COG2401, ABC-type ATPase FT fused to a predicted acetyltransferase domain [General FT function prediction only]" FT /inference="protein motif:CDD:COG3638, ABC-type FT phosphate/phosphonate transport system, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:COG3845, ABC-type FT uncharacterized transport systems, ATPase components FT [General function prediction only]" FT /inference="protein motif:CDD:COG4136, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4152, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4172, ABC-type FT uncharacterized transport system, duplicated ATPase FT component [General function prediction only]" FT /inference="protein motif:CDD:COG4178, ABC-type FT uncharacterized transport system, permease and ATPase FT components [General function prediction only]" FT /inference="protein motif:CDD:COG4181, Predicted ABC-type FT transport system involved in lysophospholipase L1 FT biosynthesis, ATPase component [Secondary metabolites FT biosynthesis, transport, and catabolism]" FT /inference="protein motif:CDD:COG4559, ABC-type hemin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG4619, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4674, Uncharacterized FT ABC-type transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:CydC, ABC-type transport FT system involved in cytochrome bd biosynthesis, fused ATPase FT and permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CydD, ABC-type transport FT system involved in cytochrome bd biosynthesis, ATPase and FT permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CysA, ABC-type FT sulfate/molybdate transport systems, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:DppD, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:DppF, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:FepC, ABC-type FT cobalamin/Fe3+-siderophores transport systems, ATPase FT components [Inorganic ion transport and metabolism / FT Coenzyme metabolism]" FT /inference="protein motif:CDD:FtsE, Predicted ATPase FT involved in cell division [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:GlnQ, ABC-type polar amino FT acid transport system, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:HisP, ABC-type histidine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:LivF, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:LivG, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:MalK, ABC-type sugar FT transport systems, ATPase components [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:CDD:MdlB, ABC-type multidrug FT transport system, ATPase and permease components [Defense FT mechanisms]" FT /inference="protein motif:CDD:MglA, ABC-type sugar FT transport system, ATPase component [Carbohydrate transport FT and metabolism]" FT /inference="protein motif:CDD:ModF, ABC-type molybdenum FT transport system, ATPase component/photorepair protein PhrA FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NatA, ABC-type Na+ transport FT system, ATPase component [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:OpuBA, ABC-type FT proline/glycine betaine transport systems, ATPase FT components [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:PhnL, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PotA, ABC-type FT spermidine/putrescine transport systems, ATPase components FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ProV, ABC-type FT proline/glycine betaine transport system, ATPase component FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PstB, ABC-type phosphate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PvdE, ABC-type siderophore FT export system, fused ATPase and permease components FT [Secondary metabolites biosynthesis, transport, and FT catabolism / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:SalX, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapD, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapF, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SufC, ABC-type transport FT system involved in Fe-S cluster assembly, ATPase component FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:SunT, ABC-type FT bacteriocin/lantibiotic exporters, contain an N-terminal FT double-glycine peptidase domain [Defense mechanisms]" FT /inference="protein motif:CDD:TagH, ABC-type FT polysaccharide/polyol phosphate transport system, ATPase FT component [Carbohydrate transport and metabolism / Cell FT envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:TauB, ABC-type FT nitrate/sulfonate/bicarbonate transport system, ATPase FT component [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:TauB, ABC-type taurine FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ThiQ, ABC-type thiamine FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:Ttg2A, ABC-type transport FT system involved in resistance to organic solvents, ATPase FT component [Secondary metabolites biosynthesis, transport, FT and catabolism]" FT /inference="protein motif:CDD:Uup, ATPase components of ABC FT transporters with duplicated ATPase domains [General FT function prediction only]" FT /inference="protein motif:CDD:YhbG, ABC-type (unclassified) FT transport system, ATPase component [General function FT prediction only]" FT /inference="protein motif:CDD:ZnuC, ABC-type Mn/Zn FT transport systems, ATPase component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG0396 ABC-type transport FT system involved in Fe-S cluster assembly, ATPase component; FT O Posttranslational modification, protein turnover, FT chaperones" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR19222 ATP-BINDING FT CASSETTE TRANSPORTER" FT /inference="protein motif:HMMPanther:PTHR19222:SF13 FT ATP-BINDING CASSETTE TRANSPORTER-RELATED" FT /inference="protein motif:HMMPfam:PF00005 ABC_tran FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:HMMTigr:TIGR01978 sufC:FeS FT assembly ATPase SufC InterPro:IPR010230 FeS assembly ATPase FT SufC GO:Molecular Function:ATP binding (GO:0005524), FT Biological Process:transport (GO:0006810)" FT /inference="protein motif:ProfileScan:PS50100 DA_BOX FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ProfileScan:PS50101 ATP_GTP_A2" FT /inference="protein motif:ProfileScan:PS50893 FT ABC_TRANSPORTER_2 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ScanRegExp:PS00211 FT ABC_TRANSPORTER_1 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33058.1" FT /translation="MLKVENLHVNVENKEILRGVDLEINPGEFHVVMGPNGSGKSTLAL FT TIAGHPKYEVRNGRILFEGEDITELGPDERAKRGILLAFQVPPEVEGVKIIEFLQQVLV FT ELKGLDPVEAYDLIVEKAKELWFKEEDLHRYVNVGFSGGERKRLELLQAVLIEPKLLIL FT DEPDSGVDVDSLSVISRKIEELHRKGTAILLITHYGRILEHIDRDRITVHVMKDGRIVR FT TGGGELVDRIDREGFAGVFEEVGA" FT gene 525160..525630 FT /locus_tag="TGAM_0557" FT /note="tg0557" FT CDS 525160..525630 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0557" FT /product="Dinitrogenase iron-molybdenum cofactor, NIF B/Y/X FT related" FT /db_xref="InterPro:IPR003731" FT /db_xref="UniProtKB/TrEMBL:C5A497" FT /inference="protein motif:CDD:COG1433, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:MTH1175, This uncharacterized FT conserved protein belongs to a family of iron-molybdenum FT cluster-binding proteins that includes NifX, NifB, and FT NifY, all of which are involved in the synthesis of an FT iron-molybdenum cofactor (FeMo-co) that binds the active FT site of the dinitrogenase enzyme" FT /inference="protein motif:CDD:NifX_NifB, This CD represents FT a family of iron-molybdenum cluster-binding proteins that FT includes NifB, NifX, and NifY, all of which are involved in FT the synthesis of an iron-molybdenum cofactor (FeMo-co) that FT binds the active site of the dinitrogenase enzyme" FT /inference="protein motif:CDD:Nitro_FeMo-Co, Dinitrogenase FT iron-molybdenum cofactor" FT /inference="protein motif:COG:COG1433 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF02579 Nitro_FeMo-Co FT InterPro:IPR003731 Dinitrogenase iron-molybdenum cofactor FT biosynthesis" FT /inference="protein motif:superfamily:SSF53146 FT MTH1175-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33059.1" FT /translation="MRIIVSTVNGGLDDRVNPAFGRTPTFTIVDVENGEIVNVQVVPNP FT GYSQPRGAGVTAAQFCIDQGADVVISGQFGPNSSQVLQAAGIRMHSAPPTMTVREAVEA FT LLRGELGPAVFGPEGGMGGGRGRGMGRGMGRGMGRGMGRGRGMGMGGGRGEW" FT gene 525627..526475 FT /locus_tag="TGAM_0558" FT /note="tg0558" FT CDS 525627..526475 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0558" FT /product="Metal-dependent hydrolase/oxidoreductase, FT beta-lactamase family" FT /db_xref="GOA:C5A498" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:C5A498" FT /inference="protein motif:CDD:COG1237, Metal-dependent FT hydrolases of the beta-lactamase superfamily II [General FT function prediction only]" FT /inference="protein motif:CDD:Lactamase_B, FT Metallo-beta-lactamase superfamily" FT /inference="protein motif:COG:COG1237 Metal-dependent FT hydrolases of the beta-lactamase superfamily II; R General FT function prediction only" FT /inference="protein motif:Gene3D:G3D.3.60.15.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11203 MRNA FT CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR" FT /inference="protein motif:HMMPanther:PTHR11203:SF11 YSH1 FT DOMAIN CONTAINING PROTEIN" FT /inference="protein motif:HMMPfam:PF00753 Lactamase_B FT InterPro:IPR001279 Beta-lactamase-like" FT /inference="protein motif:superfamily:SSF56281 FT Metallo-hydrolase/oxidoreductase" FT /protein_id="ACS33060.1" FT /translation="MSSPVFSLSVIEMKLTILFENHAGYRKGLIGYHGFSAIVEHNGSK FT VLVDTGTDGKVLLGNMAELGFSPEEIDAVFLTHGHYDHTGGLRAFLEGREKGIDIHAHP FT GIFARRIALKPYRREIGIPFKKEELEELGAKFHLSPKPVEFLPGFISSGEIERKTWDRA FT VGYLVLDGKAVPDPVLDDTALIVDLGDGIAVITGCGHSGIINIAEHAVRLTGKPIRALI FT GGFHLRGAGKALLNDAARGLSELGVERLYAGHCTGIEEFAFLSSTLGNVEGLHVGKVIE FT L" FT gene complement(526462..526752) FT /locus_tag="TGAM_0559" FT /note="tg0559" FT CDS complement(526462..526752) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0559" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A499" FT /protein_id="ACS33061.1" FT /translation="METMEELVEKVREKFDLEVKDMADAWRLVEWLEEKEWVVYIITAK FT DRKQVDAWHPRYGTLFAQFGEVPNFGSILEGILTVALLAKELEEKGFAKAR" FT gene complement(526785..527516) FT /locus_tag="TGAM_0560" FT /note="tg0560" FT CDS complement(526785..527516) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0560" FT /product="Predicted permease" FT /note="Belongs to DUF81 family; 7 probable transmembrane FT helices predicted by modhmm" FT /db_xref="GOA:C5A4A0" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:C5A4A0" FT /inference="protein motif:CDD:COG0730, Predicted permeases FT [General function prediction only]" FT /inference="protein motif:CDD:DUF81, Domain of unknown FT function DUF81" FT /inference="protein motif:COG:COG0730 Predicted permeases; FT R General function prediction only" FT /inference="protein motif:HMMPfam:PF01925 DUF81 FT InterPro:IPR002781 Protein of unknown function DUF81" FT /protein_id="ACS33062.1" FT /translation="MLQYLLDFIVGLSIGFIAGLLGVGGGFLIVPTLVLLGEPIHLAIG FT TSLTCIVLSSLSASLTHIRRGAVLYRVVLLKEVFSAPFAVLGAYLSSRLPERGLRLVFA FT FLLLYLAYTMARKKCRPHDEEGAVHYSRVPLVGILSGLVSGLLGISGGVLNVPLFHTFV FT GIPMRYAVGTSSFALFFTALAGAIEHYRLGQVDLHMAFLLAPGLIIGGRLGALTAHRVH FT PKTLRRAFAGVLILVALRMLL" FT gene complement(527548..528312) FT /locus_tag="TGAM_0561" FT /note="tg0561" FT CDS complement(527548..528312) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0561" FT /product="Predicted permease" FT /note="Belongs to DUF81 family; 8 probable transmembrane FT helices predicted by modhmm" FT /db_xref="GOA:C5A4A1" FT /db_xref="InterPro:IPR002781" FT /db_xref="UniProtKB/TrEMBL:C5A4A1" FT /inference="protein motif:CDD:COG0730, Predicted permeases FT [General function prediction only]" FT /inference="protein motif:CDD:DUF81, Domain of unknown FT function DUF81" FT /inference="protein motif:COG:COG0730 Predicted permeases; FT R General function prediction only" FT /inference="protein motif:HMMPfam:PF01925 DUF81 FT InterPro:IPR002781 Protein of unknown function DUF81" FT /protein_id="ACS33063.1" FT /translation="MLKYLSYFAVGVFIGILAALFGLGGGFLVVPTLNLLGVEMHHAVG FT TSSAAVVFTSLSSTIAYSRQKRIHYRVGLLLASTAVIGAYIGAWLTSFISASQLKVIFG FT LALVVVAIRIYRKKTAEPQEVRLEDVRVNYWLVPIGGFFAGIASGLLGVGGGIINVPFL FT TYLGLPIHYAVATSSFAIVFTALAGALKHYAMGNVETQWLVLLVPGLIIGAQLGAGIAR FT RTKASSLKKAFAIVMFLLALRMILKGLGFGIP" FT gene complement(528312..528743) FT /locus_tag="TGAM_0562" FT /note="tg0562" FT CDS complement(528312..528743) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0562" FT /product="Nucleotide binding protein, putative, containing FT PIN domain" FT /db_xref="InterPro:IPR002716" FT /db_xref="InterPro:IPR006596" FT /db_xref="UniProtKB/TrEMBL:C5A4A2" FT /inference="protein motif:COG:COG2002 Regulators of FT stationary/sporulation gene expression; K Transcription" FT /inference="protein motif:HMMPfam:PF01850 PIN FT InterPro:IPR002716 PilT protein, N-terminal" FT /inference="protein motif:HMMSmart:SM00670 no description FT InterPro:IPR006596 Nucleotide binding protein, PINc" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33064.1" FT /translation="MRRNSTDYKFLLDTNVFIAAVKRGWTDTTELLLHFLTRKRYVLVA FT NDVLMAEYRKYAEKLNALDFYDVISRQVTIVNPSREDVLRVLPYFPETQLADAVHAAMC FT LKSGAILVTNDRHFEKVSRAGIIEVWSISDAIRRILRDG" FT gene complement(528718..528984) FT /locus_tag="TGAM_0563" FT /note="tg0563" FT CDS complement(528718..528984) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0563" FT /product="Transcription regulator, SpoVT/AbrB family" FT /db_xref="InterPro:IPR006339" FT /db_xref="InterPro:IPR007159" FT /db_xref="UniProtKB/TrEMBL:C5A4A3" FT /inference="protein motif:COG:COG2002 Regulators of FT stationary/sporulation gene expression; K Transcription" FT /inference="protein motif:HMMPfam:PF04014 SpoVT_AbrB FT InterPro:IPR007159 SpoVT/AbrB-like" FT /inference="protein motif:HMMTigr:TIGR01439 FT lp_hng_hel_AbrB:transcriptional regu InterPro:IPR006339 FT Transcriptional regulator AbrB" FT /inference="protein motif:superfamily:SSF54742 FT Transcription-state regulator AbrB, the N-terminal DNA FT recognition domain" FT /protein_id="ACS33065.1" FT /translation="MVGKVGITKVDSKGRVVIPKDVRRRLNIKPGEEFLVTEIDGDTIV FT LRRFNVKKMLEKLVRNSREVNLEELEAETEEEGNRVAKELYRL" FT gene complement(529016..529474) FT /locus_tag="TGAM_0564" FT /note="tg0564" FT CDS complement(529016..529474) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0564" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4A4" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33066.1" FT /translation="MDWRKRLKGLLEPYGEITETDKGLIFEFGDDEGDFSDRLAFIIEK FT PEEWPLVEVAVKAIADLTDHDVPGRNVFAFGFEPDFGGTLLRLRLFEGKPGEGPVIGDV FT PEKVVKIAERNGIKYQRVDGEGIGLPKDFTEEDLEALVKLVEAVAFEW" FT gene complement(529485..530486) FT /locus_tag="TGAM_0565" FT /note="tg0565" FT CDS complement(529485..530486) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0565" FT /product="D-isomer specific 2-hydroxyacid dehydrogenase" FT /db_xref="GOA:C5A4A5" FT /db_xref="InterPro:IPR006139" FT /db_xref="InterPro:IPR006140" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A4A5" FT /inference="protein motif:CDD:2-Hacid_dh, D-isomer specific FT 2-hydroxyacid dehydrogenase, catalytic domain" FT /inference="protein motif:CDD:2-Hacid_dh_C, D-isomer FT specific 2-hydroxyacid dehydrogenase, NAD binding domain" FT /inference="protein motif:CDD:LdhA, Lactate dehydrogenase FT and related dehydrogenases [Energy production and FT conversion / Coenzyme metabolism / General function FT prediction only]" FT /inference="protein motif:CDD:SerA, Phosphoglycerate FT dehydrogenase and related dehydrogenases [Amino acid FT transport and metabolism]" FT /inference="protein motif:COG:COG1052 Lactate dehydrogenase FT and related dehydrogenases; C Energy production and FT conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPanther:PTHR10996 FT 2-HYDROXYACID DEHYDROGENASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10996:SF71 FT 2-HYDROXYACID DEHYDROGENASE-RELATED" FT /inference="protein motif:HMMPfam:PF00389 2-Hacid_dh FT InterPro:IPR006139 D-isomer specific 2-hydroxyacid FT dehydrogenase, catalytic region GO:Biological FT Process:metabolism (GO:0008152), Molecular FT Function:oxidoreductase activity, acting on the CH-OH group FT of donors, NAD or NADP as acceptor (GO:0016616), Molecular FT Function:NAD binding (GO:0051287)" FT /inference="protein motif:HMMPfam:PF02826 2-Hacid_dh_C FT InterPro:IPR006140 D-isomer specific 2-hydroxyacid FT dehydrogenase, NAD-binding GO:Biological Process:L-serine FT biosynthesis (GO:0006564), Molecular FT Function:oxidoreductase activity, acting on the CH-OH group FT of donors, NAD or NADP as acceptor (GO:0016616)" FT /inference="protein motif:ScanRegExp:PS00065 FT D_2_HYDROXYACID_DH_1 InterPro:IPR006140 D-isomer specific FT 2-hydroxyacid dehydrogenase, NAD-binding GO:Biological FT Process:L-serine biosynthesis (GO:0006564), Molecular FT Function:oxidoreductase activity, acting on the CH-OH group FT of donors, NAD or NADP as acceptor (GO:0016616)" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /inference="protein motif:superfamily:SSF52283 FT Formate/glycerate dehydrogenase catalytic domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33067.1" FT /translation="MRPKVAVLFKMKSKPLEELKKWADVDVILYPSVEELKKVIGKYDG FT LIVSPLNPVPGEVLERAGRLKVISCHSAGYDHVDVETATRKGIYVTKVAGVLSEAVAEF FT AVGLTIALLRKIAYADRFIRSGKWDSHRTVWSGFKGIETVYGKTVGILGMGAIGKAIAR FT RMKAMGTEILYWSRSRKPDIEEEVGARYLPLDDVLKESDIVVLALPATKETYHIINEER FT LKLLEGKYLVNIGRGTLVDEKALVKALKERRLKGYATDVFENEPVREHELFDYEWETVL FT TPHYAGLSKEAMKDMGFQAVRNLLAVLRGEVPETLVNREVLKVRPPEEVKML" FT gene complement(530533..531246) FT /locus_tag="TGAM_0566" FT /note="tg0566" FT CDS complement(530533..531246) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0566" FT /product="HAD superfamily (subfamily IA) hydrolase" FT /db_xref="GOA:C5A4A6" FT /db_xref="InterPro:IPR005833" FT /db_xref="InterPro:IPR005834" FT /db_xref="InterPro:IPR006402" FT /db_xref="InterPro:IPR006439" FT /db_xref="InterPro:IPR011950" FT /db_xref="InterPro:IPR023214" FT /db_xref="UniProtKB/TrEMBL:C5A4A6" FT /inference="protein motif:CDD:COG0637, Predicted FT phosphatase/phosphohexomutase [General function prediction FT only]" FT /inference="protein motif:CDD:COG1011, Predicted hydrolase FT (HAD superfamily) [General function prediction only]" FT /inference="protein motif:CDD:Gph, Predicted phosphatases FT [General function prediction only]" FT /inference="protein motif:CDD:Hydrolase, haloacid FT dehalogenase-like hydrolase" FT /inference="protein motif:COG:COG1011 Predicted hydrolase FT (HAD superfamily); R General function prediction only" FT /inference="protein motif:FPrintScan:PR00413 HADHALOGNASE FT InterPro:IPR005833 Haloacid dehalogenase/epoxide hydrolase FT GO:Biological Process:metabolism (GO:0008152), Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:Gene3D:G3D.3.40.50.1000 no FT description" FT /inference="protein motif:HMMPanther:PTHR12725 FAMILY NOT FT NAMED" FT /inference="protein motif:HMMPfam:PF00702 Hydrolase FT InterPro:IPR005834 Haloacid dehalogenase-like hydrolase FT GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:HMMTigr:TIGR01509 FT HAD-SF-IA-v3:HAD-superfamily hydrolase, InterPro:IPR006402 FT HAD-superfamily hydrolase subfamily IA, variant 3" FT /inference="protein motif:HMMTigr:TIGR01549 FT HAD-SF-IA-v1:HAD-superfamily hydrolase, InterPro:IPR006439 FT HAD-superfamily hydrolase, subfamily IA, variant 1 FT GO:Biological Process:metabolism (GO:0008152), Molecular FT Function:phosphoglycolate phosphatase activity FT (GO:0008967)" FT /inference="protein motif:HMMTigr:TIGR02253 CTE7:HAD FT superfamily (subfamily IA) hyd InterPro:IPR011950 FT HAD-superfamily subfamily IA hydrolase, CTE7" FT /inference="protein motif:superfamily:SSF56784 HAD-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33068.1" FT /translation="MKDMKAVFFDFVGTLITKRGENRTHLNIIREVLRRSGREDLDPVA FT IWEEYEKESSALFKGLAGKPYVKIRDVDTEALRRVAERHGFTVPEDFWEISLKMHARYG FT ELFPDAVETIKALKGLGLHVGIVTDSDNDYIEHHLGALGIYELFDSITTSEEAGFYKPH FT PRPFQLALEKAGVKPEEALYIGDNPAKDCVGAKNVGMLSALLDPSGERRELWENCDFVI FT SSLKDVIEIVKGLKG" FT gene 531358..531606 FT /locus_tag="TGAM_0567" FT /note="tg0567" FT CDS 531358..531606 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0567" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4A7" FT /inference="protein motif:superfamily:SSF54909 Dimeric FT alpha+beta barrel InterPro:IPR011008 Dimeric alpha-beta FT barrel" FT /protein_id="ACS33069.1" FT /translation="MTIAFQCTGGNMEAILLVWGVRDEVLKKIPVEGSWLYGEYDFIAK FT VEFEDEAEMESFERFLRSLINGNTYKLLPVIASATSL" FT gene 531662..532615 FT /locus_tag="TGAM_0568" FT /note="tg0568" FT CDS 531662..532615 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0568" FT /product="Radical SAM protein, putative Fe-S FT oxidoreductase" FT /db_xref="GOA:C5A4A8" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="UniProtKB/TrEMBL:C5A4A8" FT /inference="protein motif:CDD:COG0731, Fe-S oxidoreductases FT [Energy production and conversion]" FT /inference="protein motif:CDD:Radical_SAM, Radical SAM FT superfamily" FT /inference="protein motif:COG:COG0731 Fe-S oxidoreductases; FT C Energy production and conversion" FT /inference="protein motif:HMMPfam:PF04055 Radical_SAM FT InterPro:IPR007197 Radical SAM GO:Molecular FT Function:catalytic activity (GO:0003824), Molecular FT Function:iron ion binding (GO:0005506)" FT /inference="protein motif:HMMSmart:SM00729 no description FT InterPro:IPR006638 Elongator protein 3/MiaB/NifB" FT /inference="protein motif:ScanRegExp:PS01039 FT SBP_BACTERIAL_3 InterPro:IPR001638 Bacterial extracellular FT solute-binding protein, family 3 GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular FT Component:periplasmic space (sensu Proteobacteria) FT (GO:0030288)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33070.1" FT /translation="MIAFGPVPSRRLGKSLGVNNIPDKVCSYACVYCQIGRTLRMEIER FT RPFYDPALILEEVGEKVEEARERGERIDYITFVPDGEPTLDSNLGLEVELLRDLGVPLA FT ILTNSSLIWREDVRNDLLAFDFVSLKLDAVSEPLWRKVDRPHKALKLDAILEGMLEFRE FT SFDGRLVTETMLIDGVNYEGELERIAEFLSRLDPDVAYIAVPTRPPAEPWVRPAREETI FT NMAFQLFAEALGEDRVEYLIGYEGNAFAFTGNVEDDILSITSVHPMREDALRELLRKAN FT ADWDVVEKLLDEGKLIELEYNGRRFYMRRLRSREFR" FT gene 532677..533546 FT /locus_tag="TGAM_0569" FT /note="tg0569" FT CDS 532677..533546 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0569" FT /product="ATPase, ParA type/MinD superfamily, containing an FT inserted ferredoxin domain" FT /db_xref="GOA:C5A4A9" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR002586" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A4A9" FT /inference="protein motif:CDD:COG1149, MinD superfamily FT P-loop ATPase containing an inserted ferredoxin domain FT [Energy production and conversion]" FT /inference="protein motif:CDD:CooC, CO dehydrogenase FT maturation factor [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:Fer4_NifH_child, This protein FT family's function is unkown" FT /inference="protein motif:COG:COG1149 MinD superfamily FT P-loop ATPase containing an inserted ferredoxin domain; C FT Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR13696 CELL FT DIVISION INHIBITOR MIND-1" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:HMMPfam:PF01656 CbiA FT InterPro:IPR002586 Cobyrinic acid a,c-diamide synthase FT GO:Biological Process:cobalamin biosynthesis (GO:0009236), FT Molecular Function:cobyrinic acid a,c-diamide synthase FT activity (GO:0042242)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33071.1" FT /translation="MQIAVSGGKGGTGKSTVAINLAVELAKRFKLVLADLDVEAPNDHL FT LLGVDLANEEPVNQFMPRFDYSKCTKCRKCAEVCEEHAIITLKDGTPFLMPTLCSGCRA FT CEIVCPVPGAILEGSRLIGHTYVTETHYGFTLVTGKLREGEERSMPLVVEAKRRARNLD FT YELMMVDTAAGTGNTVSKAIEGSELLIAVTEPTPLGIHDTELILQLGRLMNLKTWVVVN FT RADLGDVGRVREIAGRYGAEIVAEIPYSESIVKSYVSGRPIVLEEVPEAEIFRELAEKV FT ANFLGGDE" FT gene 533546..534436 FT /locus_tag="TGAM_0570" FT /note="tg0570" FT CDS 533546..534436 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0570" FT /product="ATPase, ParA type/MinD superfamily, containing an FT inserted ferredoxin domain" FT /db_xref="GOA:C5A4B0" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR002586" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A4B0" FT /inference="protein motif:CDD:COG0455, ATPases involved in FT chromosome partitioning [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:COG1149, MinD superfamily FT P-loop ATPase containing an inserted ferredoxin domain FT [Energy production and conversion]" FT /inference="protein motif:CDD:CooC, CO dehydrogenase FT maturation factor [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:Fer4_NifH_child, This protein FT family's function is unkown" FT /inference="protein motif:CDD:MinD, Bacterial cell division FT requires the formation of a septum at mid-cell" FT /inference="protein motif:CDD:Soj, ATPases involved in FT chromosome partitioning [Cell division and chromosome FT partitioning]" FT /inference="protein motif:COG:COG1149 MinD superfamily FT P-loop ATPase containing an inserted ferredoxin domain; C FT Energy production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR13696 CELL FT DIVISION INHIBITOR MIND-1" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:HMMPfam:PF01656 CbiA FT InterPro:IPR002586 Cobyrinic acid a,c-diamide synthase FT GO:Biological Process:cobalamin biosynthesis (GO:0009236), FT Molecular Function:cobyrinic acid a,c-diamide synthase FT activity (GO:0042242)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33072.1" FT /translation="MQVAIASGKGGVGKSTITASLLYLLKDRYKLIAVDADAEAPNLGL FT LLGVEEWEEEREHFGAKVARINPESCVRCGICYERCPYECIYMDDEGNYVVNELTCEGC FT NVCGLVCPVPGTITLEQVRSGVIRRATTKYGFPIISAQLDVGKPESGKLVTEEKEWAKK FT LMDELNLEHMIVDSAAGIGCQVIASLGGADVAILIAEPTPASLSDVQRAYKVVQHFREP FT AYLIINKADLNPGFTKLGEWAEAEGIPVIGEVPYDRAIPKSMAMLKPVVEVFPESPASK FT ALKEIADVIAEEILG" FT gene complement(534437..534784) FT /locus_tag="TGAM_0571" FT /note="tg0571" FT CDS complement(534437..534784) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0571" FT /product="DNA-Binding protein, putative" FT /note="Contains Sigma3 and sigma4 domains of RNA polymerase FT sigma factors (SSF88659). DUF134 family" FT /db_xref="GOA:C5A4B1" FT /db_xref="InterPro:IPR002852" FT /db_xref="InterPro:IPR010982" FT /db_xref="InterPro:IPR013324" FT /db_xref="UniProtKB/TrEMBL:C5A4B1" FT /inference="protein motif:BlastProDom:PD015339 FT Y666_ARCFU_O29591; InterPro:IPR002852 Protein of unknown FT function DUF134" FT /inference="protein motif:CDD:COG1342, Predicted FT DNA-binding proteins [General function prediction only]" FT /inference="protein motif:CDD:DUF134, Protein of unknown FT function DUF134" FT /inference="protein motif:COG:COG1342 Predicted DNA-binding FT proteins; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMPfam:PF02001 DUF134 FT InterPro:IPR002852 Protein of unknown function DUF134" FT /inference="protein motif:superfamily:SSF88659 Sigma3 and FT sigma4 domains of RNA polymerase sigma factors FT InterPro:IPR013324 Sigma factor, regions 3 and 4" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33073.1" FT /translation="MTEMPGGMGWGRGRGRRRKMRMIGFIPQVKHFYPALPPMVPPKPP FT IFMSYEEFEALRLVDYEGLTQEEAGKRMGVSRGTVWRALNSARKKVAQMIVEGRELVIL FT PQGNEAPKMEE" FT gene 535041..536051 FT /locus_tag="TGAM_0572" FT /note="tg0572" FT CDS 535041..536051 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0572" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4B2" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33074.1" FT /translation="MGRKLKVGFVIILMVLSLVPAYTVTAGSSGNGSDSTGYVATNQTN FT RSTNATKVAAEVMLRNLERLQNYTSSLINETGNISAEILGLYERALNLTDEAKALYSEG FT RYWESLHTAILAMKAYKDVIRSIRLGTEPEFIMEIRRAGMEAKRIQEYLKHVGILIRVA FT EMKGLNVSSVSELYNKTRLAYIKVLQDIRINNTTALSVDLEKARELRMKLDMELRNLQM FT QFAIRKADKIAKAFEIKLEIMTRALERMKMIPGVNETAIENITQELNQLRIQLDQLISE FT GRYFEALQLIKKATPRLVIGAIHLRWIHKDKRVYWAIGGPHGHPGKGKGHWGHRP" FT gene 536120..537130 FT /locus_tag="TGAM_0573" FT /note="tg0573" FT CDS 536120..537130 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0573" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR002831" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A4B3" FT /inference="protein motif:CDD:COG2512, Uncharacterized FT membrane-associated protein/domain [Function unknown]" FT /inference="protein motif:COG:COG2512 Uncharacterized FT membrane-associated protein/domain; S Function unknown" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33075.1" FT /translation="MRLKTVLIVLTFMLAVSLTAPVGAQSLVSLSLKVYEDGYVLVNET FT VSTVNYSVVLDIPLLGSHVEGLLAVDQDGNILPAEVNGSNVTVYFGNASLVRLSYYTPD FT LTSKDGPIWTVSLQSPVPVEIVLPQNSVIVDLSDIPLEIRGNTVVMPAGNVSVSYIIPM FT ETTTSTTTTSTATTTTTTSPGGGAGSTSSTTSTTTAPTTTTSTTSSTPGGGGSSGSSGI FT GGFWWLVLILVLVGVGVGYVYLKNKNTRTQSAPTRESLEQFRKKIEAMNDLNDDERGAL FT IFLLENGGKAPQSKVREALGLPKTTAWRMFRRLEEKGLVRVYKLGRENWVELVLE" FT gene 537162..537845 FT /locus_tag="TGAM_0574" FT /note="tg0574" FT CDS 537162..537845 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0574" FT /product="Calcineurin-like family phosphoesterase, FT putative" FT /db_xref="GOA:C5A4B4" FT /db_xref="InterPro:IPR004376" FT /db_xref="InterPro:IPR004843" FT /db_xref="InterPro:IPR024173" FT /db_xref="UniProtKB/TrEMBL:C5A4B4" FT /inference="protein motif:CDD:COG1407, Predicted ICC-like FT phosphoesterases [General function prediction only]" FT /inference="protein motif:COG:COG1407 Predicted ICC-like FT phosphoesterases; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.60.21.10 no FT description" FT /inference="protein motif:HMMPfam:PF00149 Metallophos FT InterPro:IPR004843 Metallophosphoesterase GO:Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:HMMPIR:PIRSF000887 Predicted FT phosphoesterase, MJ0037 type InterPro:IPR011155 FT Phosphoesterase MJ0037" FT /inference="protein motif:HMMTigr:TIGR00024 FT SbcD_rel_arch:phosphoesterase, putativ InterPro:IPR004376 FT Conserved hypothetical protein 24 GO:Molecular FT Function:molecular function unknown (GO:0005554)" FT /inference="protein motif:superfamily:SSF56300 FT Metallo-dependent phosphatases" FT /protein_id="ACS33076.1" FT /translation="MRVELLPEKALRIGRTLVVADLHIGFEVAMAEEGNYVPSLLGKMV FT GDLRSILLAGKFKRLVINGDLKHSFVPVRRERRELKAFFEGISGLVNEMVLVRGNHDVG FT VAWLRELGVEIVDSLELAGWTVVHGHRLEEGERFIIGHEHPAIRLRDEVGASVKVPIFL FT QGEELIVLPAFSPWAYGNDVTREIVSPFLRKFKTESMRVIVPVENELLDFGELGRLKET FT LRALL" FT gene complement(537857..538162) FT /locus_tag="TGAM_0575" FT /note="tg0575" FT CDS complement(537857..538162) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0575" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4B5" FT /protein_id="ACS33077.1" FT /translation="MEAEEKLRKVIEEFNRLHGSEARARVLKLEGDEVIMEFEGSFCAT FT CGLYDYFDDIKWEAMDLGLELEPVEVLEAEEDDFEHGRYVVRYRIGRKKPKLEIGQ" FT gene 538253..540877 FT /gene="lhr-1" FT /locus_tag="TGAM_0576" FT /note="tg0576" FT CDS 538253..540877 FT /codon_start=1 FT /transl_table=11 FT /gene="lhr-1" FT /locus_tag="TGAM_0576" FT /product="ATP-dependent helicase, lhr-like protein (lhr)" FT /EC_number="3.6.1.-" FT /db_xref="GOA:C5A4B6" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR013701" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR017170" FT /db_xref="UniProtKB/TrEMBL:C5A4B6" FT /inference="protein motif:COG:COG1201 Lhr-like helicases; R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR10967 FT ATP-DEPENDENT RNA HELICASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10967:SF6 FT ATP-DEPENDENT HELICASE" FT /inference="protein motif:HMMPfam:PF00270 DEAD FT InterPro:IPR011545 DEAD/DEAH box helicase, N-terminal FT GO:Molecular Function:nucleic acid binding (GO:0003676), FT Molecular Function:helicase activity (GO:0004386), FT Molecular Function:ATP binding (GO:0005524)" FT /inference="protein motif:HMMPfam:PF00271 Helicase_C FT InterPro:IPR001650 Helicase, C-terminal GO:Molecular FT Function:nucleic acid binding (GO:0003676), Molecular FT Function:helicase activity (GO:0004386), Molecular FT Function:ATP binding (GO:0005524)" FT /inference="protein motif:HMMPfam:PF08494 DEAD_assoc FT InterPro:IPR013701 DEAD/H associated" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:HMMSmart:SM00487 no description FT InterPro:IPR011545 DEAD/DEAH box helicase, N-terminal FT GO:Molecular Function:nucleic acid binding (GO:0003676), FT Molecular Function:helicase activity (GO:0004386), FT Molecular Function:ATP binding (GO:0005524)" FT /inference="protein motif:HMMSmart:SM00490 no description FT InterPro:IPR001650 Helicase, C-terminal GO:Molecular FT Function:nucleic acid binding (GO:0003676), Molecular FT Function:helicase activity (GO:0004386), Molecular FT Function:ATP binding (GO:0005524)" FT /inference="protein motif:ProfileScan:PS50136 HELICASE FT InterPro:IPR001410 DEAD/DEAH box helicase GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATP-dependent helicase activity (GO:0008026)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /protein_id="ACS33078.1" FT /translation="MGEDRIQWARREYSDEEIFSILSEPVREWFRRKFGSFTPPQRYAV FT MEIHKGENVLISSPTGSGKTLSAFLSAINELILLGKEGKLEDKIYVLYVSPLRALNNDI FT KRNLEGPLAEIKEVAKELGYDLPEIRVGIRTSDTSSYEKSKMVKKPPHILITTPESLAI FT ALNAPKFRERLKTVKYLIIDEVHALAENKRGSHLALSVERLQEMAEEKFVRIGLSATIH FT PLEEIAKFVFGFDDDGKPRPGLIVDVSFAKQTEIRVESVVEDLIYTPAGELSEALYRRL FT AELIREHRTTLIFTNTRSGAERVAFNLKKRYPEFEGLIEAHHSSLSREVRLDVEEKLKR FT GELKAVVTSTSLELGIDIGTIDLVVLIGSPKSVNRALQRIGRAGHRLHEVSKGVILALD FT RDDLVEVTVLAHNARNRRLDRVRIPKNPLDVLAQHLLGMALNRVWEVDEAYRVVKRAYP FT FKDLSFEDFMSVLRYLAGEYAGLEERKVYAKIWLEDGRFGRRGKMTRAIYYMNVGTIPD FT EAKIRVYTMDKKLIGTVEEEFAERLMPGDVFVLAGRTYEFVKSRGNKLYVIPREGAKPT FT IPAWFSEMLPLSFDLALDIQRFRREVKGLLKRKDAVRRLMRKYGIDEKASRAIIAYFRE FT QARYSIIPDDETVLVEFVPGEKRNRYFFHTLIGRRANDALSRAFAYLVSKRKNCNVGIA FT INDNGFALLLPPEVELSEEEVMELFKVEDLRETLKRALDNTELLKRRFRHVANRGLLIL FT RRYVGRSKRLGRQQVMAVSLLKVLKENYPDFPLLKEVYREIMEDKMDVESAELFLSWVR FT EGKIRVVFQIHSVPSPFAFNLEAIGSSDVVLMEDRRELIKQLHRKIMAMIKETTSEDVE FT LVV" FT gene complement(540851..542068) FT /gene="mat" FT /locus_tag="TGAM_0577" FT /note="tg0577" FT CDS complement(540851..542068) FT /codon_start=1 FT /transl_table=11 FT /gene="mat" FT /locus_tag="TGAM_0577" FT /product="S-adenosylmethionine synthetase (mat)" FT /EC_number="2.5.1.6" FT /db_xref="GOA:C5A4B7" FT /db_xref="InterPro:IPR002795" FT /db_xref="UniProtKB/Swiss-Prot:C5A4B7" FT /inference="protein motif:BlastProDom:PD011777 FT METK_PYRFU_Q8TZW1; InterPro:IPR002795 Archaeal FT S-adenosylmethionine synthetase (MAT) GO:Molecular FT Function:methionine adenosyltransferase activity FT (GO:0004478), Molecular Function:ATP binding (GO:0005524), FT Biological Process:one-carbon compound metabolism FT (GO:0006730)" FT /inference="protein motif:CDD:AdoMet_Synthase, FT S-adenosylmethionine synthetase (AdoMet synthetase)" FT /inference="protein motif:CDD:MetK, Archaeal FT S-adenosylmethionine synthetase [Amino acid transport and FT metabolism]" FT /inference="protein motif:COG:COG1812 Archaeal FT S-adenosylmethionine synthetase; E Amino acid transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF01941 AdoMet_Synthase FT InterPro:IPR002795 Archaeal S-adenosylmethionine synthetase FT (MAT) GO:Molecular Function:methionine adenosyltransferase FT activity (GO:0004478), Molecular Function:ATP binding FT (GO:0005524), Biological Process:one-carbon compound FT metabolism (GO:0006730)" FT /inference="protein motif:superfamily:SSF55973 FT S-adenosylmethionine synthetase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33079.1" FT /translation="MVEKVRNIVVEELVRTPVEMQEVELVERKGIGHPDSIADGIAEAV FT SRALSREYLKRYGIILHHNTDQVEVVGGRAYPQFGGGEVIKPIYILLSGRAVELVDREE FT FPVHQVAIKAAKDYLKKAVRHLDIENHVVIDSRIGQGSVDLVGVFNKAKENPIPLANDT FT SFGVGYAPLSETERIVLETEKLLNSEEFKKKCPAVGEDIKVMGLRKGDEIDLTIAAAIV FT DSEVSNPDDYMAVKEEIYEAAKGVVEEHTQRPTKIFVNTADDPKNGIYYITVTGTSAEA FT GDDGSVGRGNRVNGLITPNRHMSMEAAAGKNPVSHVGKIYNLLSMLIANDIAEQVEGVQ FT EVYVRILSQIGKPIDEPLVASIQIIPKKGYSIDVLQKPAYEIADAWLADVTKIQKMILD FT DKLNVF" FT gene complement(542357..543823) FT /locus_tag="TGAM_0578" FT /note="tg0578" FT CDS complement(542357..543823) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0578" FT /product="RecJ-like phosphoesterase family protein" FT /note="Belongs to DHH family. Contains potassium uptake FT /TrkA-N NAD binding domain" FT /db_xref="GOA:C5A4B8" FT /db_xref="InterPro:IPR001667" FT /db_xref="InterPro:IPR003148" FT /db_xref="InterPro:IPR003156" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A4B8" FT /inference="protein motif:CDD:COG0618, FT Exopolyphosphatase-related proteins [General function FT prediction only]" FT /inference="protein motif:CDD:COG3887, Predicted signaling FT protein consisting of a modified GGDEF domain and a DHH FT domain [Signal transduction mechanisms]" FT /inference="protein motif:CDD:DHH, DHH family" FT /inference="protein motif:CDD:TrkA_N, TrkA-N domain" FT /inference="protein motif:COG:COG0618 FT Exopolyphosphatase-related proteins; R General function FT prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPfam:PF01368 DHH FT InterPro:IPR001667 Phosphoesterase, RecJ-like" FT /inference="protein motif:HMMPfam:PF02254 TrkA_N FT InterPro:IPR003148 TrkA-N GO:Biological Process:potassium FT ion transport (GO:0006813)" FT /inference="protein motif:HMMPfam:PF02272 DHHA1 FT InterPro:IPR003156 Phosphoesterase, DHHA1 GO:Molecular FT Function:nucleic acid binding (GO:0003676)" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /inference="protein motif:superfamily:SSF64182 DHH FT phosphoesterases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33080.1" FT /translation="MRILILGGGSIGRQIAEALKGEFEITIVEKDELRAKSLEESGFNV FT VQGDFSYTATLLKAGVDRANVVVITTRNLEAVKKAIYVIRTNNKEVPIVALLPDDMPKE FT TMEDIILEEFEKEVKIDYGIYPQKAITEAFLRTLFQLGEKKNALMLLKKLKEIKEKTDS FT LLILTHNNPDPDAISSAVALSLIAQNVGLKTTIAYGGEITHHENQAFVNLLGINLRRVS FT RGSYEIRKHSAIAIVDTQPNGNLTILEPEDREKVQILIDHHQIFQHLHELLPSDAFVDI FT REDVKASASILTEYIKALNIPLSETLATALFYGIYTDTKKFSQLSQVDLKAIEFLAGKV FT NHELLERIEHPDISTETAEILARAILNRKSYKNVVISNVGFIRNRDALAESADFLLRLE FT GISTVLVFGIVDDYIEMSARTRDVRVNIGAVMKEAFGEIGSGGGHATMGGARIPLGLFK FT LAKDKNSLLRLAEEAITEKFLEALKIKEQG" FT gene 543952..545601 FT /locus_tag="TGAM_0579" FT /note="tg0579" FT CDS 543952..545601 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0579" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4B9" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33081.1" FT /translation="MKLPDTRPLKENVVVISPSDLAQEVKSVASQSGGAFLKIFGKKDN FT SKYYLTILFDRTKVLAAEGQDLESGAQVIGEEAINLFRKLMGNPMVVDVYSLDEIGVKI FT SIAENLDVYSKTPKITIEELFGGRAPARVEKPKPVPKPAEKPVEKPAEKPVKAREKPKP FT KPGEIEIVIEIPGGDVLEEALKEYTKHLISEAKRIRTLQINKVVYSGELTEGVVYLNVH FT IYGHSEGQMREVAEKRMLHAISKYAPVILRMADIKPILKEIKVILDGKEVAPQEIVERD FT KKKIGKVDREGRLTLAVLEDVWPYFSAMMRTVVNEIERQGIAVKAATFDVPGRKEFEVN FT AKLAVETSLSEDQARKIIRDIITKHTKELGRTLKRYMTVHNVEVEFIKKAETVKPSAKV FT PTTGKAAEILQKKAELEKEVEKLLQQAGVEELAFLTEEKKRESEKALLRSRIEPAMEEL FT KNRLHTELKLIPRVTFKWLKLNWDAKGTTVYVDIEASFMKEEIGGLFGSFSGVDEGRIK FT QDVRETILRVIRDIQKEYGIKISLNKFNVIVR" FT gene 545650..546792 FT /locus_tag="TGAM_0580" FT /note="tg0580" FT CDS 545650..546792 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0580" FT /product="Na+/H+ antiporter" FT /note="13 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4C0" FT /db_xref="InterPro:IPR006153" FT /db_xref="UniProtKB/TrEMBL:C5A4C0" FT /inference="protein motif:CDD:KefB, Kef-type K+ transport FT systems, membrane components [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:COG:COG0475 Kef-type K+ transport FT systems, membrane components; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF00999 Na_H_Exchanger FT InterPro:IPR006153 Sodium/hydrogen exchanger GO:Biological FT Process:regulation of pH (GO:0006885), Molecular FT Function:solute:hydrogen antiporter activity (GO:0015299), FT Cellular Component:integral to membrane (GO:0016021)" FT /protein_id="ACS33082.1" FT /translation="MQVIGYVLIIIALGRFLAELFERIGYPGIVGEITAGLLLGYFLRD FT VPAGEMNLLAEFGIFFLMILAGLEITPDELRMGGREALPVYLVTLAVMFFVTLPFTNYS FT ISTGNILAASILAVASAPIVVRIKRFFGEEYLHVALSYAIISEVVILVLVYVLASFEEA FT HDPSDLAITIVKQVLFIGGVLYVNYKIGIQHKIWLITQLRRLRSDEAVFGAFMILAATL FT GFISEEVGMHFTIGAFLAGLLLHSDLVGTRQYERLETILSGVTYGIFAPIFFAWRGMNF FT RAEVTLATAYFFLAIYLVRFLLTVVLTWDGRLLSSIAKATGLVSFGILGLLVSDLGNSY FT GVLTGELYSISALTSIGGIFLAATIGRGLSFLRRSSGKGL" FT gene 546716..547315 FT /gene="pdaD" FT /gene_synonym="pvlArgDC" FT /locus_tag="TGAM_0581" FT /note="tg0581" FT CDS 546716..547315 FT /codon_start=1 FT /transl_table=11 FT /gene="pdaD" FT /gene_synonym="pvlArgDC" FT /locus_tag="TGAM_0581" FT /product="Pyruvoyl-dependent arginine decarboxylase FT (pdaD/PvlArgDC)" FT /EC_number="4.1.1.19" FT /db_xref="GOA:C5A4C1" FT /db_xref="InterPro:IPR002724" FT /db_xref="InterPro:IPR016104" FT /db_xref="InterPro:IPR016105" FT /db_xref="UniProtKB/TrEMBL:C5A4C1" FT /inference="protein motif:BlastProDom:PD010449 FT PDAD_PYRFU_Q8U0G6; InterPro:IPR002724 Pyruvoyl-dependent FT arginine decarboxylase GO:Biological Process:arginine FT catabolism (GO:0006527), Molecular Function:arginine FT decarboxylase activity (GO:0008792)" FT /inference="protein motif:CDD:PvlArgDC, Pyruvoyl-dependent FT arginine decarboxylase (PvlArgDC)" FT /inference="protein motif:COG:COG1945 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01862 PvlArgDC FT InterPro:IPR002724 Pyruvoyl-dependent arginine FT decarboxylase GO:Biological Process:arginine catabolism FT (GO:0006527), Molecular Function:arginine decarboxylase FT activity (GO:0008792)" FT /inference="protein motif:HMMTigr:TIGR00286 FT TIGR00286:arginine decarboxylase, pyruvoyl FT InterPro:IPR002724 Pyruvoyl-dependent arginine FT decarboxylase GO:Biological Process:arginine catabolism FT (GO:0006527), Molecular Function:arginine decarboxylase FT activity (GO:0008792)" FT /inference="protein motif:superfamily:SSF56271 FT Pyruvoyl-dependent histidine and arginine decarboxylases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33083.1" FT /translation="MEASSSRRRSAGVFPSSAVRVGKVYKSRDEGTGSCKVRWVVKMSW FT MTPKRAFMGAAAAEGGTKLNAFDNALLKLGIGNVNLVKLSSVIPAHIEWIEKVHDVPIG FT MLLPTVYAHIESDEPGMTISAALGVGISEGNEGGLIYEYSGYCTKEEAEEMVRKMVEEG FT FAVRGWKLKEFKAVSAEITVKEKPAAVVAAVVMFPY" FT gene complement(547312..547812) FT /locus_tag="TGAM_0582" FT /note="tg0582" FT CDS complement(547312..547812) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0582" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4C2" FT /protein_id="ACS33084.1" FT /translation="MMNEIKVRKELFQRIKSLVGEIEEGMRYGIPHLVGELVLESEDDP FT NLELTVTVFSESSHWILLRDGKSILFMMPVENSNPRTTFLELWTFLKGRSEGKRLEPGV FT TIKGVLKNVLQRRGYNVVWMNVMGGENSGYVEVLASKGETRYRMTFEKRKADEFTLIDM FT ERI" FT gene 547886..548767 FT /gene="speE" FT /locus_tag="TGAM_0583" FT /note="tg0583" FT CDS 547886..548767 FT /codon_start=1 FT /transl_table=11 FT /gene="speE" FT /locus_tag="TGAM_0583" FT /product="Spermidine synthase (speE)" FT /EC_number="2.5.1.16" FT /db_xref="GOA:C5A4C3" FT /db_xref="InterPro:IPR001045" FT /db_xref="UniProtKB/TrEMBL:C5A4C3" FT /inference="protein motif:CDD:COG4262, Predicted spermidine FT synthase with an N-terminal membrane domain [General FT function prediction only]" FT /inference="protein motif:CDD:SpeE, Spermidine synthase FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:Spermine_synth, FT Spermine/spermidine synthase" FT /inference="protein motif:COG:COG0421 Spermidine synthase; FT E Amino acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR11558 SPERMIDINE FT SYNTHASE InterPro:IPR001045 Spermine synthase GO:Molecular FT Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMPanther:PTHR11558:SF5 FT SPERMIDINE SYNTHASE" FT /inference="protein motif:HMMPfam:PF01564 Spermine_synth FT InterPro:IPR001045 Spermine synthase GO:Molecular FT Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMTigr:TIGR00417 speE:spermidine FT synthase InterPro:IPR001045 Spermine synthase GO:Molecular FT Function:catalytic activity (GO:0003824)" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:ProfileScan:PS51006 FT SPERMIDINE_SYNTHASE_2 InterPro:IPR001045 Spermine synthase FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33085.1" FT /translation="MVVSMGFNEMEGAFIEWYPRGYGVAFKVKRRLFAIQTDYQRLEIY FT ETEGFGKLLVLDDTVQLVEVGEESYHEALVHPVMLAHPNPRRILVIGGGDGGTLREVLR FT HETVEKATMVEIDEGVVEASYLYLDVAKDLLERLIKGEEKRAELIIGDGVKYLRETDER FT FDVIIVDSTDPVGPAKLLFSEEFYRSAYEKLNERGLYITQAGSVYLFTNELIDAYRAMK FT KVFDRVYYFSFPVIGYASPWSFLVGVKGDIDFTKVDLERAKKLDLYYYDPERHETLFQM FT PRYVRQLLEERK" FT gene 548764..549639 FT /locus_tag="TGAM_0584" FT /note="tg0584" FT CDS 548764..549639 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0584" FT /product="Conserved hypothetical protein" FT /note="8 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR022791" FT /db_xref="UniProtKB/TrEMBL:C5A4C4" FT /protein_id="ACS33086.1" FT /translation="MKLERKHFSLFLTILLGLFLAYRIREELSSIEWSKVDPSYFPAVF FT LFGVLAFLAYTAIWYFLLSSIRRVPFWRLVELNLVGSYLSMTLNSAIGGIVKAKYALPN FT WWQSIGIVALVTALEILPGGIVAIISGDLIVLPLLLLVLWGIVHEDSLYPLVALPFRLL FT GKGEWIRNFYLGWKTAKTNGGAFARAIAVAFLQASFLALALVVTGGAFGIRVPIEKGLV FT AVAYSTVIGGIVGTPGGIGGNELGVILAIGDVSAAATMAFVYKFFTQYIFAILGAIPFY FT RVLRENGKPL" FT gene 549662..550390 FT /locus_tag="TGAM_0585" FT /note="tg0585" FT CDS 549662..550390 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0585" FT /product="Creatinine amidohydrolase (creatininase)" FT /EC_number="3.5.2.10" FT /db_xref="GOA:C5A4C5" FT /db_xref="InterPro:IPR003785" FT /db_xref="InterPro:IPR024087" FT /db_xref="UniProtKB/TrEMBL:C5A4C5" FT /inference="protein motif:CDD:COG1402, Uncharacterized FT protein, putative amidase [General function prediction FT only]" FT /inference="protein motif:CDD:Creatininase, Creatinine FT amidohydrolase" FT /inference="protein motif:COG:COG1402 Uncharacterized FT protein, putative amidase; R General function prediction FT only" FT /inference="protein motif:HMMPfam:PF02633 Creatininase FT InterPro:IPR003785 Creatininase" FT /inference="protein motif:superfamily:SSF52218 FT Flavoproteins" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33087.1" FT /translation="MIIVRIEELSWPEFDRIKDKVVAVILPVGSVEAHGRHLPLGTDVF FT APLKIAELVEQKVRERGKEVLVMPPIWYGHSFALNAYPGTINVRPESLRMYVGDVLAEL FT AAEGFKKIVLLNGHGGNVYPLTEAAEDVAELYPDVEVYLINWWLDFREDILSVCSGQGH FT AGEDETSVMLAIRPELVNMREARGRRVKRKIRVIKKDIGKEVFPDGLNDDPSSATAEKG FT ERILQIVSESIARIILGEEG" FT gene 550387..551019 FT /locus_tag="TGAM_0586" FT /note="tg0586" FT CDS 550387..551019 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0586" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4C6" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33088.1" FT /translation="MSVPREVLDELDKRIKRLQAVIEIAESVPPSDNRPIPKLQSSFSV FT YLWMSVAWFIGGFLIIYFLRSRYGGALNSAPTGVSLAVYAVLALGVVILLVAYYLSRRK FT EEGEVFDIDERARAARRLLKEFYLPLKKALEGDDEEAVRALADKLLEDPLLARAMDVLH FT EGNPKLCAYALYLYVSREKVGGDEIRETLERLDNKPLRRLLSVLVEG" FT gene complement(551119..551808) FT /locus_tag="TGAM_0587" FT /note="tg0587" FT CDS complement(551119..551808) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0587" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF84 family" FT /db_xref="InterPro:IPR002786" FT /db_xref="UniProtKB/TrEMBL:C5A4C7" FT /inference="protein motif:BlastProDom:PD016591 FT YI97_METTH_O27919; InterPro:IPR002786 Protein of unknown FT function DUF84" FT /inference="protein motif:CDD:DUF84, Protein of unknown FT function DUF84" FT /inference="protein motif:COG:COG1986 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01931 DUF84 FT InterPro:IPR002786 Protein of unknown function DUF84" FT /inference="protein motif:HMMTigr:TIGR00258 FT TIGR00258:conserved hypothetical protein T FT InterPro:IPR002786 Protein of unknown function DUF84" FT /protein_id="ACS33089.1" FT /translation="MIAKTNPEQGALSLETGEAKDKTLPPHGYRAKVGDFIYKVFGGSE FT MGGIMRIAVGSTNPTKVKAVENVMRRIYGDVEVVGVEVDSGVSDQPIGIEEIARGAINR FT AKQALEKTGADLGVGIEAGIYPFPGTLTGYLDVQVCAIVSPDGVITIGHGPGFEYPPVV FT IERILKEGVEAGIAMGELVNDPELKRKVGAIGVLSKGLLTRTELNEIAVLMAMIPRLNR FT ELFFERK" FT gene 551826..555026 FT /gene="ileS" FT /locus_tag="TGAM_0588" FT /note="tg0588" FT CDS 551826..555026 FT /codon_start=1 FT /transl_table=11 FT /gene="ileS" FT /locus_tag="TGAM_0588" FT /product="Isoleucyl-tRNA synthetase (ileS)" FT /EC_number="6.1.1.5" FT /db_xref="GOA:C5A4C8" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR002300" FT /db_xref="InterPro:IPR002301" FT /db_xref="InterPro:IPR009008" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR023586" FT /db_xref="UniProtKB/TrEMBL:C5A4C8" FT /inference="protein motif:COG:COG0060 Isoleucyl-tRNA FT synthetase; J Translation, ribosomal structure and FT biogenesis" FT /inference="protein motif:FPrintScan:PR00984 TRNASYNTHILE FT InterPro:IPR002301 Isoleucyl-tRNA synthetase, class Ia FT GO:Molecular Function:isoleucine-tRNA ligase activity FT (GO:0004822), Molecular Function:ATP binding (GO:0005524), FT Biological Process:isoleucyl-tRNA aminoacylation FT (GO:0006428)" FT /inference="protein motif:Gene3D:G3D.1.10.730.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.510.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11946 AMINO ACID FT TRNA SYNTHETASE" FT /inference="protein motif:HMMPanther:PTHR11946:SF3 FT ISOLEUCYL-TRNA SYNTHETASE" FT /inference="protein motif:HMMPfam:PF00133 tRNA-synt_1 FT InterPro:IPR002300 Aminoacyl-tRNA synthetase, class Ia FT GO:Molecular Function:aminoacyl-tRNA ligase activity FT (GO:0004812), Molecular Function:ATP binding (GO:0005524), FT Biological Process:tRNA aminoacylation for protein FT translation (GO:0006418)" FT /inference="protein motif:HMMPfam:PF08264 Anticodon_1 FT InterPro:IPR013155 tRNA synthetase, valyl/leucyl, FT anticodon-binding" FT /inference="protein motif:HMMTigr:TIGR00392 FT ileS:isoleucyl-tRNA synthetase InterPro:IPR002301 FT Isoleucyl-tRNA synthetase, class Ia GO:Molecular FT Function:isoleucine-tRNA ligase activity (GO:0004822), FT Molecular Function:ATP binding (GO:0005524), Biological FT Process:isoleucyl-tRNA aminoacylation (GO:0006428)" FT /inference="protein motif:ScanRegExp:PS00178 FT AA_TRNA_LIGASE_I InterPro:IPR001412 Aminoacyl-tRNA FT synthetase, class I GO:Molecular Function:aminoacyl-tRNA FT ligase activity (GO:0004812), Molecular Function:ATP FT binding (GO:0005524), Biological Process:tRNA FT aminoacylation for protein translation (GO:0006418)" FT /inference="protein motif:superfamily:SSF47323 FT InterPro:IPR009080 Aminoacyl-tRNA synthetase, class 1a, FT anticodon-binding" FT /inference="protein motif:superfamily:SSF52374 FT Nucleotidylyl transferase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33090.1" FT /translation="MIKEPEFREYNPGKLEEKIEAFWKENNTYKKVKASRANGPKYYFL FT DGPPYVSGAIHLGTAWNKIIKDMIIRFRTMQGYNVRRQPGFDMHGLPIEVKVEQALGLK FT TKKDIETEIGVDNFIKKCKEFALNNLKIMTEQFKMLGIWMDWDNPYMTIKNEYIESGWF FT TLKKAWEKGLLEKDKRVLHWCPRCETALAEHEVRGEYKVRKDPSIYVKFPVEGRENEYL FT LIWTTTPWTLPANLAVTVHPEYDYAKVKVETEDGEEYWIIAKALVERVLAEVGAKGEVV FT EEFKGEELEGLRYVHVLMDEYPRQMEFREKYEWAHRVILGEHVTLEDGTGLVHTAPGHG FT EEDFEVGQKYGLPVYSPVDDQGRYTEGRWKGVYVKDADPEIIEHLKEKGYLVKAGTIEH FT KYPHCWRCKTPLIFRATDQWFLKVSKVKDKIIKENDEKVTWYPEWVKVRYDNGVMNSGD FT WVISRQRYWGIPLPIWQAEDGEIYVVGSFKELVELAVAIEVDGERIELPEDYNEKLRVI FT EEKLGPEDLHRPYVDAFIIKVNGKEMKRVKDVVDVWFDSGIASWASLDYPRNKELFEKL FT WPADFIVEGEDQVTKWFYSQQAASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIR FT PEEVVQKEGRDPFRFYMLWATNPWENLRFSWKGLAQVKRMLNILWNVYVLSATYMSLDN FT FDPTKLKPEEFPFREEDRWILSRVNGLIKDVEEGIETFRLTKATRAIYTFVVEDLSRWY FT IRLIRKRMWVEGDDPDKLAAYYTVWKVFDVLLRLMAPFTPYIAEEIYQNMLRPFLGVES FT VHMLDWPKPDEKAIDEELEREMEAVRKIVEAGSSARQRAKIKLRYPVRRIIVETEDETV FT KKAVERLNRILRDQLNAKEVVVGKVERELVIKPNFAKVGPEFKGDAKLVIAWINEHGRE FT LYEAGEMDVKLEGKTFHLTREHLTIEEKLPDFFVAEDFEGGRVFVDKTLTRELLAEGLA FT REFVRRIQEMRKRLDLDVNDRIVVTIETTDENRELLSENLDYIKKETRATEIIFGKAKG FT YVVEWPEVQAKIGIEKVE" FT gene 555222..556685 FT /locus_tag="TGAM_0589" FT /note="tg0589" FT CDS 555222..556685 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0589" FT /product="Glycosyltransferase, putative" FT /db_xref="GOA:C5A4C9" FT /db_xref="UniProtKB/TrEMBL:C5A4C9" FT /inference="protein motif:CDD:COG1215, FT Glycosyltransferases, probably involved in cell wall FT biogenesis [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:COG:COG1215 Glycosyltransferases, FT probably involved in cell wall biogenesis; M Cell FT wall/membrane/envelope biogenesis" FT /inference="protein motif:Gene3D:G3D.3.90.550.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR16779 FAMILY NOT FT NAMED" FT /inference="protein motif:HMMPanther:PTHR16779:SF2 FT SUBFAMILY NOT NAMED" FT /inference="protein motif:superfamily:SSF53448 FT Nucleotide-diphospho-sugar transferases" FT /protein_id="ACS33091.1" FT /translation="MYDKIVAYFGKFLNSLDCILQSHEKEFWRDYTLEKHNQLNYSKLE FT YSLFLTIGILGSLILNSLSGNHTDSLSTLDKILVNAKYIWLAYSPIAALSSYGLLRYNA FT KDDFQLERKVQSEDYKVTFQITTRGFNKDAVRRGVKSVAYWAPKYLRDYEIWVVTEDDV FT DKSFFDKLKEIDDNVRIIYVPRDYKTKNNTKYKARALNYALDVRREEGYISDKTWIYLM FT DEESIVGEDTILGIIDFIENEAKKGKLIGQGLIVYSNFWGKNLLTSLEDSLRAGDDITR FT YKIQARYGKVIVGIHGSHLLYRSDLEDIIGWDFGEVRAEDAYFGLLINKYFNKAWGWLK FT GKLYEQSPYSIKDFLKQRRRWLWGKLDILLKNKTVGVKYKLIQAIHLISWLSSLPSIII FT TYINIAYPTPVHHKITSVAFGYSIATLSYLYWEGSKLNLEPSNASSRLKRVLNILAIPI FT IAPLEGLSAWYGLLTYRESKKKGFEVIRK" FT gene complement(557441..557611) FT /locus_tag="TGAM_0590" FT /note="tg0590" FT CDS complement(557441..557611) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0590" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4D0" FT /inference="protein motif:HMMPfam:PF02697 DUF217 FT InterPro:IPR003847 Protein of unknown function DUF217" FT /protein_id="ACS33092.1" FT /translation="MTEDEKRTSKRKKEKKGNIDVLMIAFGSMTEEEVEKLRKTLKEVE FT EWMNEGVPCSG" FT gene 557812..558867 FT /locus_tag="TGAM_0591" FT /note="tg0591" FT CDS 557812..558867 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0591" FT /product="Prokaryotic ATPase, AAA superfamily" FT /note="Contains Archaeal ATPase domain (PF01637)" FT /db_xref="GOA:C5A4D1" FT /db_xref="InterPro:IPR011579" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A4D1" FT /inference="protein motif:CDD:Arch_ATPase, Archaeal ATPase" FT /inference="protein motif:CDD:COG1672, Predicted ATPase FT (AAA+ superfamily) [General function prediction only]" FT /inference="protein motif:COG:COG1672 Predicted ATPase FT (AAA+ superfamily); R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPfam:PF01637 Arch_ATPase FT InterPro:IPR011579 Prokaryotic ATPase" FT /inference="protein motif:ScanRegExp:PS00237 FT G_PROTEIN_RECEP_F1_1 InterPro:IPR000276 Rhodopsin-like GPCR FT superfamily GO:Molecular Function:rhodopsin-like receptor FT activity (GO:0001584), Biological Process:G-protein coupled FT receptor protein signaling pathway (GO:0007186), Cellular FT Component:integral to membrane (GO:0016021)" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33093.1" FT /translation="MLFDLRPKERREDIFDREKEFKDLEKSVEKYPLTLLLGIRRVGKS FT SILRAYLNENPGILIDCRELYAESGHITKDDLIREIQSKRGLLQRTLTKFKIKLNLWFL FT EIEPEEASLREVFRELNELGEKTGRFIIAFDEAQYLRFYGSRGGKELLALFAHAYDSLP FT NLRIILTGSEVGLLHDFLGVDNYESPLYGRVGGEIYVRPFDEKTSKEFLRTGFREAGLD FT VSEDTIDRAVALLDGIPGWLVLFGVKYLEARDFEKAMEATLNVAKGLLFGELGELERRS FT RRYTGILRAIALGYNRWSLIRDYLAVKGMKTPEPRLYELLKNLKKMGWIEEVNEEYRLV FT DPIIRLVLRGL" FT gene complement(558862..559452) FT /locus_tag="TGAM_0592" FT /note="tg0592" FT CDS complement(558862..559452) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0592" FT /product="SAM-dependent methyltransferase" FT /db_xref="GOA:C5A4D2" FT /db_xref="InterPro:IPR013216" FT /db_xref="UniProtKB/TrEMBL:C5A4D2" FT /inference="protein motif:COG:COG0500 SAM-dependent FT methyltransferases; Q Secondary metabolites biosynthesis, FT transport and catabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR12843 PHEROMONE FT RECEPTOR-RELATED" FT /inference="protein motif:HMMPfam:PF08241 Methyltransf_11 FT InterPro:IPR013216 Methyltransferase type 11" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /protein_id="ACS33094.1" FT /translation="MMEKEWYEVKKRKLKELYWEQNKGNPYLPNGFLVYPHEIYDFFLG FT FINHPGRVIDLGCGNGLLLRHLVENSEHELVPYGVDFIEESIEQARRDILPEFADNFVV FT ANVRDYVREMPDEYFDFIFFDPYNVHPKDLPETVNHLIRACRTGGRIIFYTYHDVLESL FT NFEWVGDFLTEEVRRKLKRFDHPEVSVGVLEKS" FT gene complement(559495..560067) FT /locus_tag="TGAM_0593" FT /note="tg0593" FT CDS complement(559495..560067) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0593" FT /product="Hypothetical protein, conserved in N-terminus" FT /db_xref="UniProtKB/TrEMBL:C5A4D3" FT /protein_id="ACS33095.1" FT /translation="MSVEGKKHGEIEARAVPPVSWKRKLIALNQTPKVSPDTARYLAKI FT ELDKVPFPEFKDAKIGEMKLFYFPDGRPAYYEAPLLKGGKVVGIMFVPALKTMPPTWMQ FT VFKGNELIASNWINSQRKGELLTTGTWFSELQSSESKRRTVQWLTWRAESTKLIRTSHL FT SLQLSPKKTLGSGTPSPAENQEYRQLG" FT gene complement(560128..560922) FT /gene="lmbE" FT /locus_tag="TGAM_0594" FT /note="tg0594" FT CDS complement(560128..560922) FT /codon_start=1 FT /transl_table=11 FT /gene="lmbE" FT /locus_tag="TGAM_0594" FT /product="N-acetylglucosaminylphosphatidylinositol FT deacetylase, putative, LmbE-like protein (LmbE)" FT /db_xref="InterPro:IPR003737" FT /db_xref="InterPro:IPR024078" FT /db_xref="UniProtKB/TrEMBL:C5A4D4" FT /inference="protein motif:CDD:COG2120, Uncharacterized FT proteins, LmbE homologs [Function unknown]" FT /inference="protein motif:CDD:DUF158, Uncharacterised FT LmbE-like protein, COG2120" FT /inference="protein motif:COG:COG2120 Uncharacterized FT proteins, LmbE homologs; S Function unknown" FT /inference="protein motif:HMMPfam:PF02585 PIG-L FT InterPro:IPR003737 N-acetylglucosaminylphosphatidylinositol FT deacetylase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33096.1" FT /translation="MMVLSFEGSLEKLLTILEFDLSNPFKDAEKVLCIEPHPDDCVIGM FT GGTIKKLTERGVKVVYLCLTDGSMGTYDESVSPHELALIRRREEEKSARMLGVERIIWL FT DYRDTELPYNIEARNNIIKVIRQEKPDLVLAPDPWLPYEAHPDHVTAGKLALEAVLFSP FT LPNVARSDLHIGLEPHRIDLIGFYYTAKPNYFVDITDVMELKLRAIRVHRSQFTDDVWE FT KWEPFLRTVAEFYGEKIGVRYAEGLRFMPELFLHITPFAELI" FT gene complement(560980..562065) FT /locus_tag="TGAM_0595" FT /note="tg0595" FT CDS complement(560980..562065) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0595" FT /product="Radical-activating enzyme, pyruvate formate-lyase FT related" FT /db_xref="GOA:C5A4D5" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:C5A4D5" FT /inference="protein motif:CDD:COG2108, Uncharacterized FT conserved protein related to pyruvate formate-lyase FT activating enzyme [General function prediction only]" FT /inference="protein motif:CDD:Radical_SAM, Radical SAM FT superfamily" FT /inference="protein motif:COG:COG2108 Uncharacterized FT conserved protein related to pyruvate formate-lyase FT activating enzyme; R General function prediction only" FT /inference="protein motif:HMMPfam:PF04055 Radical_SAM FT InterPro:IPR007197 Radical SAM GO:Molecular FT Function:catalytic activity (GO:0003824), Molecular FT Function:iron ion binding (GO:0005506)" FT /inference="protein motif:ScanRegExp:PS01087 FT RADICAL_ACTIVATING InterPro:IPR001989 Radical-activating FT enzyme GO:Molecular Function:iron ion binding (GO:0005506), FT Biological Process:oxygen and reactive oxygen species FT metabolism (GO:0006800), Molecular Function:oxidoreductase FT activity (GO:0016491)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33097.1" FT /translation="MVWETPYFSYAVRELPKGCQLCVRGEKLVLFTTGICPRNCFYCPL FT SPWRREDVVYANERPVKSVDDIIEEALIQEAKGAGVTGGDPLARLDRTVSYIRALKEAF FT GRKFHVHLYTTGALATKKNLEKLYDVGLDEIRFHPDLFNPNSKLFKVEIENIKNAFDFD FT WDIGGEIPSIPGQFERMKWYAEFLDRLGAKFLNVNELEFSEVTLKTMLDMGYEPVSDES FT SAIRGSLELGLKLLEWGEKNTSLSYHLCTAKLKDAVQLRNRLRRMARKVAKPYMEVTED FT GTLRFGIAEYDDLDELYEFLVEEVEVPAEWLYINREKGRIEMPEEVALELAEAIEGDVR FT FFIVEEYPTFDRMEVERIPLP" FT gene 562137..562499 FT /gene="rnp2" FT /locus_tag="TGAM_0596" FT /note="tg0596" FT CDS 562137..562499 FT /codon_start=1 FT /transl_table=11 FT /gene="rnp2" FT /locus_tag="TGAM_0596" FT /product="Ribonuclease P protein component 2 (rnp2)" FT /EC_number="3.1.26.5" FT /db_xref="GOA:C5A4D6" FT /db_xref="InterPro:IPR002759" FT /db_xref="InterPro:IPR016434" FT /db_xref="UniProtKB/Swiss-Prot:C5A4D6" FT /inference="protein motif:BlastProDom:PD012772 FT O29761_ARCFU_O29761" FT /inference="protein motif:CDD:RNase_P_Rpp14, Rpp14 family" FT /inference="protein motif:COG:COG1369 RNase P/RNase MRP FT subunit POP5; J Translation, ribosomal structure and FT biogenesis" FT /inference="protein motif:HMMPfam:PF01900 RNase_P_Rpp14 FT InterPro:IPR002759 Ribonuclease P-related protein FT GO:Molecular Function:ribonuclease activity (GO:0004540), FT Biological Process:tRNA processing (GO:0008033)" FT /protein_id="ACS33098.1" FT /translation="MREKPKYLPPTLREKHRYIAFQLIGERPFRKDEVKKAIWEASLST FT LGVLGSAKAKPWFIRFDEKSQTGIVRVDRKHVEELRFALTLVTEINGSKAIFRTLGVSG FT TIKRLKRKFLAEFGWR" FT gene complement(562496..563842) FT /gene="glgA" FT /locus_tag="TGAM_0597" FT /note="tg0597" FT CDS complement(562496..563842) FT /codon_start=1 FT /transl_table=11 FT /gene="glgA" FT /locus_tag="TGAM_0597" FT /product="Glycogen synthase (glgA)" FT /EC_number="2.4.1.21" FT /db_xref="GOA:C5A4D7" FT /db_xref="InterPro:IPR001296" FT /db_xref="InterPro:IPR013534" FT /db_xref="UniProtKB/TrEMBL:C5A4D7" FT /inference="protein motif:CDD:GlgA, Glycogen synthase FT [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:Glycos_transf_1, Glycosyl FT transferases group 1" FT /inference="protein motif:CDD:RfaG, Glycosyltransferase FT [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:COG:COG0297 Glycogen synthase; G FT Carbohydrate transport and metabolism" FT /inference="protein motif:HMMPanther:PTHR12526 FT GLYCOSYLTRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR12526:SF1 FT GLYCOSYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00534 Glycos_transf_1 FT InterPro:IPR001296 Glycosyl transferase, group 1 FT GO:Biological Process:biosynthesis (GO:0009058)" FT /inference="protein motif:HMMPfam:PF08323 Glyco_transf_5 FT InterPro:IPR013534 Starch synthase catalytic region" FT /inference="protein motif:HMMTigr:TIGR02095 FT glgA:glycogen/starch synthases, ADP-glucose FT InterPro:IPR011835 Glycogen/starch synthases, ADP-glucose FT type GO:Molecular Function:starch synthase activity FT (GO:0009011), Biological Process:glucan biosynthesis FT (GO:0009250)" FT /inference="protein motif:superfamily:SSF53756 FT UDP-Glycosyltransferase/glycogen phosphorylase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33099.1" FT /translation="MRVLILSFEYLPVKVGGLAEAVTSIAEGLVKLGNEVVVLTPDHGK FT NLGEPSLSFGLSFEGRRVEVTARKREQNGVTVYSLSGDVLDADVYPAWETLLRKTVLFG FT KASAGLLNRLIGTFKPDVVHAHDWHTVFALGLLKKYFGLRTVFTVHRLNKAKVPAWLFH FT EANLSELAPYPDLDPEHTAAYIADIVTTVSRSYLWEEWDFFRHFDGKVTHVFNGIDCSF FT WSEHLLENADKPRDERRRKVLGRFGLSDGRAFMFIGRFDRAQKGVDTLLRAIEILSGDP FT AFREMRFIIVGKGDPGLEAWAKAVENRFPENVRVITDVLPRELVRELYGSVDFVVIPSY FT FEPFGLVQLEAMCLGAVPIASAVGGLKDTIIDLNADPENATGILVPPRDAFALARAMIK FT AKELDEGTLTRLRENARRRAREDFTWEKACRRYLLVYTGAVDKAMPFLL" FT gene complement(563848..564870) FT /gene="trmB-1" FT /locus_tag="TGAM_0598" FT /note="tg0598" FT CDS complement(563848..564870) FT /codon_start=1 FT /transl_table=11 FT /gene="trmB-1" FT /locus_tag="TGAM_0598" FT /product="Transcription regulator, TrmB-like protein FT (TrmB)" FT /db_xref="InterPro:IPR002831" FT /db_xref="InterPro:IPR011991" FT /db_xref="InterPro:IPR021586" FT /db_xref="UniProtKB/TrEMBL:C5A4D8" FT /inference="protein motif:BlastProDom:PD006327 FT Q8U4G4_PYRFU_Q8U4G4; InterPro:IPR011571 Transcriptional FT regulator winged helix GO:Molecular FT Function:phenylalanine-tRNA ligase activity (GO:0004826), FT Molecular Function:ATP binding (GO:0005524), Biological FT Process:protein biosynthesis (GO:0006412)" FT /inference="protein motif:CDD:COG1378, Predicted FT transcriptional regulators [Transcription]" FT /inference="protein motif:CDD:TrmB, Sugar-specific FT transcriptional regulator TrmB" FT /inference="protein motif:COG:COG1378 Predicted FT transcriptional regulators; K Transcription" FT /inference="protein motif:Gene3D:G3D.1.10.10.10 no FT description InterPro:IPR011991 Winged helix repressor FT DNA-binding" FT /inference="protein motif:HMMPfam:PF01978 TrmB FT InterPro:IPR002831 Transcriptional regulator TrmB" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33100.1" FT /translation="MREEEIIEKLQRLGLTKYESVAYITLLKLGPSKATDITKESGIPH FT TRVYDVLSSLHRKGFVDVMQGTPRLYKPVNPEVILEKIKEEIIRDIDSLKGAFLELYRE FT VHGEELPEIWTIQGFDNTVERAEYVIRSAKHEVLINTPLEFLELLKNEIKGRKDVIFVI FT ISNFREVPDWLKGDNIILARSGGAPWLMASWIIGDIDYALFFGALPRDTRKEKFYSFWA FT KSPRIIQNYMHWFYTIYFDNSEIIKPPNYEKLPKPLSLVNIRTLIVLLKFAGLPRKAEI FT VGRIIDTKKPVTIDGEIIDYEYTPLTANVTFRHNGKELKVGGIGSYFEDVEGEKFILLE FT " FT gene 564943..566859 FT /locus_tag="TGAM_0599" FT /note="tg0599" FT CDS 564943..566859 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0599" FT /product="Maltogenic alpha-amylase" FT /EC_number="3.2.1.-" FT /db_xref="GOA:C5A4D9" FT /db_xref="InterPro:IPR006047" FT /db_xref="InterPro:IPR006589" FT /db_xref="InterPro:IPR013780" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR013783" FT /db_xref="InterPro:IPR014756" FT /db_xref="InterPro:IPR015902" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:C5A4D9" FT /inference="protein motif:CDD:Aamy, Alpha-amylase domain" FT /inference="protein motif:CDD:Alpha-amylase, Alpha amylase, FT catalytic domain" FT /inference="protein motif:CDD:GlgB, 1,4-alpha-glucan FT branching enzyme [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:TreY, Maltooligosyl trehalose FT synthase [Carbohydrate transport and metabolism]" FT /inference="protein motif:COG:COG0366 Glycosidases; G FT Carbohydrate transport and metabolism" FT /inference="protein motif:Gene3D:G3D.2.60.40.1180 no FT description" FT /inference="protein motif:Gene3D:G3D.3.20.20.80 no FT description" FT /inference="protein motif:HMMPanther:PTHR10357 ALPHA FT AMYLASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10357:SF65 FT MALTODEXTRIN GLUCOSIDASE-RELATED" FT /inference="protein motif:HMMPfam:PF00128 Alpha-amylase FT InterPro:IPR006047 Alpha amylase, catalytic region FT GO:Molecular Function:alpha-amylase activity (GO:0004556), FT Biological Process:carbohydrate metabolism (GO:0005975)" FT /inference="protein motif:HMMPfam:PF02903 Alpha-amylase_N FT InterPro:IPR004185 Glycoside hydrolase, family 13, FT N-terminal Ig-like region GO:Molecular Function:hydrolase FT activity, hydrolyzing O-glycosyl compounds (GO:0004553), FT Biological Process:carbohydrate metabolism (GO:0005975)" FT /inference="protein motif:HMMSmart:SM00642 no description FT InterPro:IPR006589 Alpha amylase, catalytic subdomain FT GO:Molecular Function:alpha-amylase activity (GO:0004556), FT Biological Process:carbohydrate metabolism (GO:0005975)" FT /inference="protein motif:superfamily:SSF51011 Glycosyl FT hydrolaCleaning" FT /inference="protein motif:superfamily:SSF51445 FT (Trans)glycosidases" FT /inference="protein motif:superfamily:SSF81296 E set FT domains" FT /protein_id="ACS33101.1" FT /translation="MYKTFGFVEDPVFGRLARVEFSIPYRGERYAYLLGSFNAFNEGSF FT RMERRGSRWFIRVLLPEGVWRYAFSLEGRFERDPENENVETYRRPSYKFEKEVSVAGVI FT GPEPVYHSPSLLYLYTFGGRVNFVLRAKKGYLVSSTLILKGKDIEMRKRASDELFDYFG FT AEVGNLEGPVEYSFLGESSEGPFELGPFSAVPIALKAPEWPLERVFYQVMPDRFAGNCL FT RDSGNFCGGDLWGLKERLDHIAGLGFNALYLTPIFESTTYHGYDVVDYFHVSRRLGGDE FT AFDELVKELRRRGIKLILDGVFHHTSFFHPYFQDVVEKGERSRYVGFYRILGFPVVSKR FT FLRALDSGLLPGDTRSAPMGAEWNYESFYSVWLMPRLNSDSEEVFEFVVNVMGYWLKKA FT DGWRLDVAHGVPPDFWVRVRERMPSSAYLIGEVMDDARLYLFRGFHGVMNYALYDAILK FT FFAFGEISAEEFLNELELISVRYGPAEYYAYNFLDNHDTERFLDLVHDERLYLCALAFL FT MTYKGIPAVFYGDEIGLRGRKGGGLDAGRTPMKWREENWNREILETTRELIHLRRNSKA FT LQFGTFRPLLFRGRTIVYERAIDGESLVVAINCSEVHVKVSLPGGKSLNLPPLSFRIVD FT TGR" FT gene 566913..568334 FT /gene="malE" FT /locus_tag="TGAM_0600" FT /note="tg0600" FT CDS 566913..568334 FT /codon_start=1 FT /transl_table=11 FT /gene="malE" FT /locus_tag="TGAM_0600" FT /product="Maltose-binding periplasmic protein precursor FT (maltodextrin-binding protein) (malE)" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A4E0" FT /db_xref="InterPro:IPR006059" FT /db_xref="InterPro:IPR006060" FT /db_xref="InterPro:IPR006061" FT /db_xref="UniProtKB/TrEMBL:C5A4E0" FT /inference="protein motif:CDD:MalE, Maltose-binding FT periplasmic proteins/domains [Carbohydrate transport and FT metabolism]" FT /inference="protein motif:CDD:PotD, FT Spermidine/putrescine-binding periplasmic protein [Amino FT acid transport and metabolism]" FT /inference="protein motif:CDD:SBP_bac_1, Bacterial FT extracellular solute-binding protein" FT /inference="protein motif:CDD:UgpB, ABC-type sugar FT transport system, periplasmic component [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:COG:COG2182 Maltose-binding FT periplasmic proteins/domains; G Carbohydrate transport and FT metabolism" FT /inference="protein motif:FPrintScan:PR00181 MALTOSEBP FT InterPro:IPR006060 Maltose binding protein GO:Molecular FT Function:maltose transporter activity (GO:0005363), FT Biological Process:maltose transport (GO:0015768)" FT /inference="protein motif:Gene3D:G3D.3.40.190.10 no FT description" FT /inference="protein motif:HMMPfam:PF01547 SBP_bac_1 FT InterPro:IPR006059 Bacterial extracellular solute-binding FT protein, family 1 GO:Molecular Function:transporter FT activity (GO:0005215), Biological Process:transport FT (GO:0006810)" FT /inference="protein motif:ScanRegExp:PS01037 FT SBP_BACTERIAL_1 InterPro:IPR006061 Bacterial extracellular FT solute-binding family 1 GO:Molecular Function:transporter FT activity (GO:0005215), Biological Process:transport FT (GO:0006810)" FT /inference="protein motif:superfamily:SSF53850 Periplasmic FT binding protein-like II" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33102.1" FT /translation="MVNMRKGLFTLLLIGVLLFGVVASGCIGGGGGGTTSSPSKTSSSS FT TSQTTTSQAQTTTSISTTTSQTTTTGATETTTTATTTTTTTTTTTTSTQGEKITIVLWH FT AMGQAEAQTFKDLISEFEIEHPNIDIQMEYKANLETALKAAIPAGKGPDLFIWAHDWIG FT KFAEGGLLKPIDGYVTEDFTNSFIPIAQDAFEYKGHYYGVPFAAETVALIYNKDMVPNP FT PQNFDEMKTIMEQHYDPDNGKYGIASPIDPYFLSAWAQAFGGYYFDDKTETPGVNLTET FT VEGFRFFFDNIWPYMAHTTDYNAQVDLFTSGNAPMMINGPWIISKVKEAGINFGVVPLP FT PINKDGKTYYPRPYAGVKLIYVTSNAPDEKMQAIWEFLKWFSTSEDVAVTLAFQNGYVP FT VLNSVANEPDITSDPVISAYLQALQHAYLMPKSTKMAAVWGPVGQAITDYIGGKKTLEQ FT ALNDAQKEILKALSS" FT gene 568370..569269 FT /gene="malF" FT /locus_tag="TGAM_0601" FT /note="tg0601" FT CDS 568370..569269 FT /codon_start=1 FT /transl_table=11 FT /gene="malF" FT /locus_tag="TGAM_0601" FT /product="Maltose transport system permease protein (malF)" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4E1" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:C5A4E1" FT /inference="protein motif:CDD:LplB, ABC-type polysaccharide FT transport system, permease component [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:CDD:PotB, ABC-type FT spermidine/putrescine transport system, permease component FT I [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PotC, ABC-type FT spermidine/putrescine transport system, permease component FT II [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ThiP, ABC-type Fe3+ transport FT system, permease component [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:UgpA, ABC-type sugar FT transport systems, permease components [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:COG:COG1175 ABC-type sugar FT transport systems, permease components; G Carbohydrate FT transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33103.1" FT /translation="MKKSTVAALTLILPGMAAFLFFNIYPILYSIYIAFTNAQMGNFPT FT HNPSAPPLKFVGLDNFRWALNDPGFRSAFLWTWIFVATSVTLKVLAGIFLSVLYNSKYV FT IGKSLYRALLIIPWALPLLFSITVWRFMFDPIFGPVNIILRDFGVSNPPDWINNATYGF FT IALNIIEVWLAYPFMMTVITSALQSVPDILVEAAIIDGANYWQRLTKVVLPIVSKPIAF FT ATILTSAASFQYFLVPFLYNGSLFEDRFLLLYGYRKAFGASVPHYGRAAAVLFIATLIL FT AVYMYISMKITKLQEGAS" FT gene 569269..570612 FT /gene="malG" FT /locus_tag="TGAM_0602" FT /note="tg0602" FT CDS 569269..570612 FT /codon_start=1 FT /transl_table=11 FT /gene="malG" FT /locus_tag="TGAM_0602" FT /product="Maltose transport system permease protein (malG)" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4E2" FT /db_xref="InterPro:IPR000515" FT /db_xref="UniProtKB/TrEMBL:C5A4E2" FT /inference="protein motif:CDD:CysU, ABC-type sulfate FT transport system, permease component [Posttranslational FT modification, protein turnover, chaperones]" FT /inference="protein motif:CDD:MalG, ABC-type maltose FT transport systems, permease component [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:CDD:PotB, ABC-type FT spermidine/putrescine transport system, permease component FT I [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PotC, ABC-type FT spermidine/putrescine transport system, permease component FT II [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ThiP, ABC-type Fe3+ transport FT system, permease component [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:UgpE, ABC-type sugar FT transport system, permease component [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:COG:COG3833 ABC-type maltose FT transport systems, permease component; G Carbohydrate FT transport and metabolism" FT /inference="protein motif:HMMPfam:PF00528 BPD_transp_1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /inference="protein motif:ProfileScan:PS50928 ABC_TM1 FT InterPro:IPR000515 Binding-protein-dependent transport FT systems inner membrane component GO:Molecular FT Function:transporter activity (GO:0005215), Biological FT Process:transport (GO:0006810), Cellular Component:membrane FT (GO:0016020)" FT /protein_id="ACS33104.1" FT /translation="MFDFHFRNRRELFKALLATALAIIVMGIILFPVYYVFTVSLKPQG FT TLASTSLDLLPDQMTLQNYKEVMFGHKDATVKTKVFNITSSRGKLIGTEYTIEYMDGVL FT YGKYRGLPPRFNLKYISHLKVEGANRSVENGQVQYLGGKFVSMDAKRIMVSLASLRREY FT LYLTAKEVRITVNGKTGIPLDGFTKVGNNTYVGRDVTLKIPDRVRLDSEEGHFEARDFY FT YVFINQIGGGFFGYLKRSLIIASLTVVLTLLFAVPAAYAFSRLKFFGREHILYFYLMFT FT QVSGGLGIAGLVALYGMLVKLDLTNNIYVLPLIYAAGGVPFNTWLLKSYLDSISPDFDE FT AALVDGANYLQIIWHVLLPMALPGIATVAIFAFIGGWTELILASLLIDNESKYPLTVWL FT YSMLNDLRNVSWNQFSAAALLFALPVFIMFLLAQNYIKSGLTVGGLKE" FT gene 570652..574791 FT /gene="apu-1" FT /locus_tag="TGAM_0603" FT /note="tg0603" FT CDS 570652..574791 FT /codon_start=1 FT /transl_table=11 FT /gene="apu-1" FT /locus_tag="TGAM_0603" FT /product="Amylopullulanase (Apu)" FT /EC_number="3.2.1.-" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4E3" FT /db_xref="InterPro:IPR004300" FT /db_xref="InterPro:IPR008960" FT /db_xref="InterPro:IPR011330" FT /db_xref="InterPro:IPR015922" FT /db_xref="InterPro:IPR019248" FT /db_xref="UniProtKB/TrEMBL:C5A4E3" FT /inference="protein motif:CDD:COG1449, FT Alpha-amylase/alpha-mannosidase [Carbohydrate transport and FT metabolism]" FT /inference="protein motif:CDD:COG3889, Predicted solute FT binding protein [General function prediction only]" FT /inference="protein motif:CDD:COG4945, Membrane-anchored FT protein predicted to be involved in regulation of FT amylopullulanase [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:Glyco_hydro_57, Glycosyl FT hydrolase family 57" FT /inference="protein motif:COG:COG1449 FT Alpha-amylase/alpha-mannosidase; G Carbohydrate transport FT and metabolism" FT /inference="protein motif:HMMPfam:PF03065 Glyco_hydro_57 FT InterPro:IPR004300 Glycoside hydrolase, family 57 FT GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:carbohydrate metabolism (GO:0005975)" FT /inference="protein motif:superfamily:SSF88713 Glycoside FT hydrolase/deacetylase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33105.1" FT /translation="MVRWNRKLALSLLLIGVMLVSAFAVNLGGANETTPKPLNVIIVWH FT QHQPFYYDPVLNVYTRPWVRLHAANDYWKMAHYLSEYPEVHATIDLSGSLIAQIVDYMN FT GREDTLQLISYKIANGAPLSLDEKWQVLQVPGGFFDHTIPWNGEPVTDRDGNPTRKFWR FT HYTELKDKLMNAKKKYSNLSLEEQKVKITGEFTEQDYVDLAVYFNLAWIDYGYIVSHPE FT LKAIYDRVDEGNYTREDLKTVLNAQMWLLNHTFEEHERINLLLGNGNVEVTVVPYAHPI FT GPILNDFGWEGDFDAQVKKADELYREYIGNGTVAPRGGWAAESALNDKTLEILADNGWE FT WVMTDQMVLERMGIPKTVDNYYHPWVAQFGDRKIYLFPRNHDLSDRVGFRYAGMNQYQA FT VEDFVNELLKIQKQNYDGSLVYVITLDGENPWEHYPYDGQLFLTQLYKRLTELQEAGLI FT RTLTPSEYIQLYGDKAKVLTPKMMERLDFTSEERVKALLKAQSLNELYDMAGINEEMQW FT PESSWIDGTLSTWIGEPQENYAWYWLYLARKTLMEHNASMGLARWENANEYLLRAEGSD FT WFWWYGKDQDSGQDYAFDRYFKAYLYEIYRLANVTPPDYLYGNYYPDGEPYLRRALDGL FT KEGQVRTYSSLSPLAENVSVYFDGEGLHFVLNGNLSEFEVSLYEVNRHVGNTFTLLQSR FT PDELSYSTWPFSKDSVGLMITKHIVYRNGTAELYNATDYDNSTLLGNLTVKKTEDSVDI FT TVPFDNLESPSDFYFAVSTVRNGSLEVISTPVELKLPTQVKGAIIADIKDPEGDDHGPG FT TYTYPTDGVFKPGVFDLLRFRLLEGADGYIMEFYFKNLGDNPWNGPNGFSLQIIEVYLD FT YKPGGNTSAIKMFPDGPGANVNLDPEHPWDVAFRIAGWDYGNLIVLPNGTVYQGEMKIS FT TDPTKNAIIVKIPKKYIKIDEDYGLWGDVLTGSQDGYGPDKWRPVAVTAEQWKVGGGDP FT DAIIAGVEPRVMDELVPPGFKPTQEQQLSSYDAENGKRATVKAISLLKTGIVVKDPEGD FT DHGPGTYTYPTDPVFVPGAFDLLKFKMVNESDYWHLEFYFKDLGDNPWNGPNGFSLQII FT EAYFDFKDGGNTSAIKMFPDGPGANVDLDPSHPWDLALRIAGWDYGNLIVLPNGTVYQG FT EMKISADPTKNAIIVELPKRYLRVNREYGLYASILTGSQDGYGPDKWRPVAVTAEQWKV FT GGGDPDAIIAGVEPRVMDELVPPGFKPTQEQQLSSYDAENGKRATVLMITLIKGTSTGG FT GTTTTTTTPSPTTTTTTSTTTISTTTTTSSSGGGTSSGPTTTTTSTTTTSTTTTTTTPT FT TTTTSTTTSKKGGWKLCGPAVIVGLALMPLLLRRKL" FT gene 574821..575939 FT /gene="malK-1" FT /locus_tag="TGAM_0604" FT /note="tg0604" FT CDS 574821..575939 FT /codon_start=1 FT /transl_table=11 FT /gene="malK-1" FT /locus_tag="TGAM_0604" FT /product="ABC-type transport system, ATPase component, FT putative maltose/maltodextrin transporter (malK)" FT /EC_number="3.6.3.19" FT /db_xref="GOA:C5A4E4" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR005116" FT /db_xref="InterPro:IPR008995" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:C5A4E4" FT /inference="protein motif:BlastProDom:PD000006 FT Q9V293_PYRAB_Q9V293; InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:CDD:AbcC, ABC-type metal ion FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ABCC_ATM1_transporter, ATM1 FT is an ABC transporter that is expressed in the FT mitochondria" FT /inference="protein motif:CDD:ABCC_bacteriocin_exporters, FT ABC-type bacteriocin exporters" FT /inference="protein motif:CDD:ABCC_CFTR1, The CFTR FT subfamily domain 1" FT /inference="protein motif:CDD:ABCC_cytochrome_bd, The CYD FT subfamily implicated in cytochrome bd biogenesis" FT /inference="protein motif:CDD:ABCC_Glucan_exporter_like, FT Glucan exporter ATP-binding protein" FT /inference="protein motif:CDD:ABCC_Hemolysin, The FT ABC-transporter hemolysin B is a central component of the FT secretion machinery that translocates the toxin, hemolysin FT A, in a Sec-independent fashion across both membranes of E" FT /inference="protein motif:CDD:ABCC_MRP_domain1, Domain 1 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_domain2, Domain 2 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_Like, The MRP FT (Mutidrug Resistance Protein)-like transporters are FT involved in drug, peptide, and lipid export" FT /inference="protein motif:CDD:ABCC_MsbA, MsbA is an FT essential ABC transporter, closely related to eukaryotic FT MDR proteins" FT /inference="protein motif:CDD:ABCC_Protease_Secretion, This FT family represents the ABC component of the protease FT secretion system PrtD, a 60-kDa integral membrane protein FT sharing 37% identity with HlyB, the ABC component of the FT alpha-hemolysin secretion pathway, in the C-terminal FT domain" FT /inference="protein motif:CDD:ABCC_SUR1_N, The SUR domain FT 1" FT /inference="protein motif:CDD:ABCC_TAP, TAP, the FT Transporter Associated with Antigen Processing" FT /inference="protein motif:CDD:ABCD_peroxisomal_ALDP, FT Peroxisomal ATP-binding cassette transporter (Pat) is FT involved in the import of very long-chain fatty acids FT (VLCFA) into the peroxisome" FT /inference="protein motif:CDD:ABCG_EPDR, ABCG transporters FT are involved in eye pigment (EP) precursor transport, FT regulation of lipid-trafficking mechanisms, and pleiotropic FT drug resistance (DR)" FT /inference="protein motif:CDD:ABCG_White, The White FT subfamily represents ABC transporters homologous to the FT Drosophila white gene, which acts as a dimeric importer for FT eye pigment precursors" FT /inference="protein motif:CDD:ABC_ATPase, ABC (ATP-binding FT cassette) transporter nucleotide-binding domain" FT /inference="protein motif:CDD:ABC_BcrA_bacitracin_resist, FT The BcrA subfamily represents ABC transporters involved in FT peptide antibiotic resistance" FT /inference="protein motif:CDD:ABC_Carb_Monos_I, This family FT represents the domain I of the carbohydrate uptake proteins FT that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Monos_II, This FT family represents domain II of the carbohydrate uptake FT proteins that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Solutes_like, ABC FT Carbohydrate and Solute Transporters-like subgroup" FT /inference="protein motif:CDD:ABC_CcmA_heme_exporter, CcmA, FT the ATP-binding component of the bacterial CcmAB FT transporter" FT /inference="protein motif:CDD:ABC_Class3, This class is FT comprised of all BPD (Binding Protein Dependent) systems FT that are largely represented in archaea and eubacteria and FT are primarily involved in scavenging solutes from the FT environment" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain1, FT Domain I of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain2, FT Domain II of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_CysA_sulfate_importer, FT Part of the ABC transporter complex cysAWTP involved in FT sulfate import" FT /inference="protein motif:CDD:ABC_DrrA, DrrA is the FT ATP-binding protein component of a bacterial exporter FT complex that confers resistance to the antibiotics FT daunorubicin and doxorubicin" FT /inference="protein motif:CDD:ABC_drug_resistance_like, FT ABC-type multidrug transport system, ATPase component" FT /inference="protein motif:CDD:ABC_DR_subfamily_A, This FT family of ATP-binding proteins belongs to a multisubunit FT transporter involved in drug resistance (BcrA and DrrA), FT nodulation, lipid transport, and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_FeS_Assembly, ABC-type FT transport system involved in Fe-S cluster assembly, ATPase FT component" FT /inference="protein motif:CDD:ABC_FtsE_transporter, FtsE is FT a hydrophilic nucleotide-binding protein that binds FtsX to FT form a heterodimeric ATP-binding cassette (ABC)-type FT transporter that associates with the bacterial inner FT membrane" FT /inference="protein motif:CDD:ABC_HisP_GlnQ_permeases, HisP FT and GlnQ are the ATP-binding components of the bacterial FT periplasmic histidine and glutamine permeases, repectively" FT /inference="protein FT motif:CDD:ABC_Iron-Siderophores_B12_Hemin, ABC FT transporters, involved in the uptake of siderophores, heme, FT and vitamin B12, are widely conserved in bacteria and FT archaea" FT /inference="protein motif:CDD:ABC_KpsT_Wzt, ABC_KpsT_Wzt FT The KpsT/Wzt ABC transporter subfamily is involved in FT extracellular polysaccharide export" FT /inference="protein motif:CDD:ABC_MalK_N, The N-terminal FT ATPase domain of the maltose transporter, MalK" FT /inference="protein motif:CDD:ABC_Metallic_Cations, ABC FT component of the metal-type transporters" FT /inference="protein FT motif:CDD:ABC_MetN_methionine_transporter, MetN (also known FT as YusC) is an ABC-type transporter encoded by metN of the FT metNPQ operon in Bacillus subtilis that is involved in FT methionine transport" FT /inference="protein motif:CDD:ABC_MJ0796_Lo1CDE_FtsE, This FT family is comprised of MJ0796 ATP-binding cassette, FT macrolide-specific ABC-type efflux carrier (MacAB), and FT proteins involved in cell division (FtsE), and release of FT liporoteins from the cytoplasmic membrane (LolCDE)" FT /inference="protein motif:CDD:ABC_Mj1267_LivG_branched, The FT Mj1267/LivG ABC transporter subfamily is involved in the FT transport of the hydrophobic amino acids leucine, FT isoleucine and valine" FT /inference="protein motif:CDD:ABC_ModC_like, Archeal FT protein closely related to ModC" FT /inference="protein FT motif:CDD:ABC_ModC_molybdenum_transporter, ModC is an FT ABC-type transporter and the ATPase component of a FT molybdate transport system that also includes the FT periplasmic binding protein ModA and the membrane protein FT ModB" FT /inference="protein motif:CDD:ABC_MTABC3_MDL1_MDL2, MTABC3 FT (also known as ABCB6) is a mitochondrial ATP-binding FT cassette protein involved in iron homeostasis and one of FT four ABC transporters expressed in the mitochondrial inner FT membrane, the other three being MDL1(ABC7), MDL2, and ATM1" FT /inference="protein motif:CDD:ABC_NatA_like, Similar in FT sequence to NatA, this is the ATPase component of a FT bacterial ABC-type Na+ transport system called NatAB, which FT catalyzes ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled to proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NatA_sodium_exporter, FT NatA is the ATPase component of a bacterial ABC-type Na+ FT transport system called NatAB, which catalyzes FT ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NikE_OppD_transporters, FT The ABC transporter subfamily specific for the transport of FT dipeptides, oligopeptides (OppD), and nickel (NikDE)" FT /inference="protein motif:CDD:ABC_NrtD_SsuB_transporters, FT NrtD and SsuB are the ATP-binding subunits of the bacterial FT ABC-type nitrate and sulfonate transport systems, FT respectively" FT /inference="protein motif:CDD:ABC_OpuCA_Osmoprotection, FT OpuCA is a the ATP binding component of a bacterial solute FT transporter that serves a protective role to cells growing FT in a hyperosmolar environment" FT /inference="protein motif:CDD:ABC_Org_Solvent_Resistant, FT ABC (ATP-binding cassette) transport system involved in FT resistant to organic solvents" FT /inference="protein motif:CDD:ABC_PDR_domain1, The FT pleiotropic drug resistance (PDR) family of ATP-binding FT cassette (ABC) transporters" FT /inference="protein motif:CDD:ABC_PhnC_transporter, FT ABC-type phosphate/phosphonate transport system" FT /inference="protein motif:CDD:ABC_PotA_N, PotA is an FT ABC-type transporter and the ATPase component of the FT spermidine/putrescine-preferential uptake system consisting FT of PotA, -B, -C, and -D" FT /inference="protein motif:CDD:ABC_Pro_Gly_Bertaine, This FT family comprises the glycine betaine/L-proline ATP binding FT subunit in bacteria and its equivalents in archaea" FT /inference="protein FT motif:CDD:ABC_PstB_phosphate_transporter, Phosphate uptake FT is of fundamental importance in the cell physiology of FT bacteria because phosphate is required as a nutrient" FT /inference="protein motif:CDD:ABC_putative_ATPase, This FT subfamily is involved in drug resistance, nodulation, lipid FT transport, and bacteriocin and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor_domain1, FT The ATPase domain 1 of RNase L inhibitor" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor_domain2, FT The ATPase domain 2 of RNase L inhibitor" FT /inference="protein motif:CDD:ABC_subfamily_A, The ABCA FT subfamily mediates the transport of a variety of lipid FT compounds" FT /inference="protein FT motif:CDD:ABC_ThiQ_thiamine_transporter, ABC-type thiamine FT tranport system" FT /inference="protein motif:CDD:ABC_TM1139_LivF_branched, FT LivF (TM1139) is part of the LIV-I bacterial ABC-type FT two-component transport system that imports neutral, FT branched-chain amino acids" FT /inference="protein motif:CDD:ABC_tran, ABC transporter" FT /inference="protein motif:CDD:ABC_YhbG, The ABC FT transporters belonging to the YhbG family are similar to FT members of the Mj1267_LivG family, which is involved in the FT transport of branched-chain amino acids" FT /inference="protein motif:CDD:AppF, ABC-type oligopeptide FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ArpD, ABC-type FT protease/lipase transport system, ATPase and permease FT components [General function prediction only]" FT /inference="protein motif:CDD:ArtP, ABC-type arginine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ATM1, ABC-type transport FT system involved in Fe-S cluster assembly, permease and FT ATPase components [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:BtuD, ABC-type cobalamin FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:CbiO, ABC-type cobalt FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:CcmA, ABC-type multidrug FT transport system, ATPase component [Defense mechanisms]" FT /inference="protein motif:CDD:CcmA, ABC-type transport FT system involved in cytochrome c biogenesis, ATPase FT component [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:CeuD, ABC-type enterochelin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG1123, ATPase components of FT various ABC-type transport systems, contain duplicated FT ATPase [General function prediction only]" FT /inference="protein motif:CDD:COG1245, Predicted ATPase, FT RNase L inhibitor (RLI) homolog [General function FT prediction only]" FT /inference="protein motif:CDD:COG2401, ABC-type ATPase FT fused to a predicted acetyltransferase domain [General FT function prediction only]" FT /inference="protein motif:CDD:COG3638, ABC-type FT phosphate/phosphonate transport system, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:COG3845, ABC-type FT uncharacterized transport systems, ATPase components FT [General function prediction only]" FT /inference="protein motif:CDD:COG4136, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4152, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4172, ABC-type FT uncharacterized transport system, duplicated ATPase FT component [General function prediction only]" FT /inference="protein motif:CDD:COG4178, ABC-type FT uncharacterized transport system, permease and ATPase FT components [General function prediction only]" FT /inference="protein motif:CDD:COG4181, Predicted ABC-type FT transport system involved in lysophospholipase L1 FT biosynthesis, ATPase component [Secondary metabolites FT biosynthesis, transport, and catabolism]" FT /inference="protein motif:CDD:COG4559, ABC-type hemin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG4586, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4619, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4674, Uncharacterized FT ABC-type transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:CydC, ABC-type transport FT system involved in cytochrome bd biosynthesis, fused ATPase FT and permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CydD, ABC-type transport FT system involved in cytochrome bd biosynthesis, ATPase and FT permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CysA, ABC-type FT sulfate/molybdate transport systems, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:DppD, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:DppF, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:FepC, ABC-type FT cobalamin/Fe3+-siderophores transport systems, ATPase FT components [Inorganic ion transport and metabolism / FT Coenzyme metabolism]" FT /inference="protein motif:CDD:FtsE, Predicted ATPase FT involved in cell division [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:GlnQ, ABC-type polar amino FT acid transport system, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:HisP, ABC-type histidine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:LivF, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:LivG, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:MalK, ABC-type sugar FT transport systems, ATPase components [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:CDD:MdlB, ABC-type multidrug FT transport system, ATPase and permease components [Defense FT mechanisms]" FT /inference="protein motif:CDD:MglA, ABC-type sugar FT transport system, ATPase component [Carbohydrate transport FT and metabolism]" FT /inference="protein motif:CDD:ModC, ABC-type molybdate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ModF, ABC-type molybdenum FT transport system, ATPase component/photorepair protein PhrA FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NatA, ABC-type Na+ transport FT system, ATPase component [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:OpuBA, ABC-type FT proline/glycine betaine transport systems, ATPase FT components [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:PhnL, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PotA, ABC-type FT spermidine/putrescine transport systems, ATPase components FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ProV, ABC-type FT proline/glycine betaine transport system, ATPase component FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PstB, ABC-type phosphate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PvdE, ABC-type siderophore FT export system, fused ATPase and permease components FT [Secondary metabolites biosynthesis, transport, and FT catabolism / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:SalX, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapD, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapF, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SufC, ABC-type transport FT system involved in Fe-S cluster assembly, ATPase component FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:SunT, ABC-type FT bacteriocin/lantibiotic exporters, contain an N-terminal FT double-glycine peptidase domain [Defense mechanisms]" FT /inference="protein motif:CDD:TagH, ABC-type FT polysaccharide/polyol phosphate transport system, ATPase FT component [Carbohydrate transport and metabolism / Cell FT envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:TauB, ABC-type FT nitrate/sulfonate/bicarbonate transport system, ATPase FT component [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:TauB, ABC-type taurine FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ThiQ, ABC-type thiamine FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:Ttg2A, ABC-type transport FT system involved in resistance to organic solvents, ATPase FT component [Secondary metabolites biosynthesis, transport, FT and catabolism]" FT /inference="protein motif:CDD:Uup, ATPase components of ABC FT transporters with duplicated ATPase domains [General FT function prediction only]" FT /inference="protein motif:CDD:YhbG, ABC-type (unclassified) FT transport system, ATPase component [General function FT prediction only]" FT /inference="protein motif:CDD:ZnuC, ABC-type Mn/Zn FT transport systems, ATPase component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG3839 ABC-type sugar FT transport systems, ATPase components; G Carbohydrate FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.2.40.50.190 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR19222 ATP-BINDING FT CASSETTE TRANSPORTER" FT /inference="protein motif:HMMPfam:PF00005 ABC_tran FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:HMMPfam:PF03459 TOBE FT InterPro:IPR005116 TOBE" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:ProfileScan:PS50100 DA_BOX FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ProfileScan:PS50101 ATP_GTP_A2" FT /inference="protein motif:ProfileScan:PS50893 FT ABC_TRANSPORTER_2 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ScanRegExp:PS00211 FT ABC_TRANSPORTER_1 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:superfamily:SSF50331 MOP-like FT InterPro:IPR008995 Molybdate/tungstate binding" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33106.1" FT /translation="MAEVVLRGVWKRFGEVVAVRDMNLHVKDGEFMILLGPSGCGKTTT FT LRMIAGLEEPTKGQIYIGDKLVADPEKGVFVPPRDRDIAMVFQSYALYPHMTVYDNIAF FT PLKLRKVPKQEIDRRVREVAEMLGLTELLNRKPRELSGGQKQRVALGRAIVRKPKVFLM FT DEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVINQGVLQQVG FT TPDEVYDRPANTFVAGFIGSPPMNFMDATITEDGFADFGEFRLKLLPEHVEVLRDKNLL FT GRDVIFGIRPEDIYDAMFAQVKVPGENMVRAMVEIIENLGSEKIVHLRVGGITFLGSFR FT SESKVREGQEVDVVFDMRKAHIFERKSGKAIF" FT gene 575962..576360 FT /locus_tag="TGAM_0605" FT /note="tg0605" FT CDS 575962..576360 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0605" FT /product="Conserved hypothetical protein" FT /note="Belongs to UPF0146 family" FT /db_xref="GOA:C5A4E5" FT /db_xref="InterPro:IPR005353" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A4E5" FT /inference="protein motif:BlastProDom:PD021130 FT Y209_PYRHO_O57948; InterPro:IPR005353 Protein of unknown FT function UPF0146 GO:Molecular Function:molecular function FT unknown (GO:0005554)" FT /inference="protein motif:CDD:UPF0146, Uncharacterized FT protein family (UPF0146)" FT /inference="protein motif:COG:COG1255 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPfam:PF03686 UPF0146 FT InterPro:IPR005353 Protein of unknown function UPF0146 FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:HMMPIR:PIRSF016725 FT Uncharacterised conserved protein InterPro:IPR005353 FT Protein of unknown function UPF0146 GO:Molecular FT Function:molecular function unknown (GO:0005554)" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /protein_id="ACS33107.1" FT /translation="MLEKLAEFIAENFSQGKAVELGIGFQTKVALRLIELGYDVLAIDW FT NEKAVENARRAGIKAVRDDLFRPRLSLYRDAVLLYSVRPTPEIMEPIVELSRKVNVPLV FT VLPLSGDSVPRPLRLVNYKGLAIYVYKP" FT gene 576383..577744 FT /gene="deoB" FT /locus_tag="TGAM_0606" FT /note="tg0606" FT CDS 576383..577744 FT /codon_start=1 FT /transl_table=11 FT /gene="deoB" FT /locus_tag="TGAM_0606" FT /product="Phosphopentomutase (deoB)" FT /EC_number="5.4.2.7" FT /db_xref="GOA:C5A4E6" FT /db_xref="InterPro:IPR005841" FT /db_xref="InterPro:IPR005843" FT /db_xref="InterPro:IPR005844" FT /db_xref="InterPro:IPR005845" FT /db_xref="InterPro:IPR005846" FT /db_xref="InterPro:IPR016055" FT /db_xref="InterPro:IPR016066" FT /db_xref="InterPro:IPR024086" FT /db_xref="UniProtKB/TrEMBL:C5A4E6" FT /inference="protein motif:CDD:Pgm, Phosphoglucomutase FT [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:PGM_PMM_I, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain I" FT /inference="protein motif:CDD:PGM_PMM_II, FT Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha FT domain II" FT /inference="protein motif:CDD:{ManB}, Phosphomannomutase FT [Carbohydrate transport and metabolism]" FT /inference="protein motif:COG:COG1109 Phosphomannomutase; G FT Carbohydrate transport and metabolism" FT /inference="protein motif:FPrintScan:PR00509 PGMPMM FT InterPro:IPR005841 Phosphoglucomutase/phosphomannomutase FT GO:Biological Process:carbohydrate metabolism (GO:0005975), FT Molecular Function:intramolecular transferase activity, FT phosphotransferases (GO:0016868)" FT /inference="protein motif:Gene3D:G3D.3.40.120.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.460.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR19136 FT SUGAR-PHOSPHATE NUCLEOTIDYL TRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR19136:SF5 FT PHOSPHOMANNOMUTASE" FT /inference="protein motif:HMMPfam:PF00408 PGM_PMM_IV FT InterPro:IPR005843 Phosphoglucomutase/phosphomannomutase C FT terminal GO:Biological Process:carbohydrate metabolism FT (GO:0005975), Molecular Function:intramolecular transferase FT activity, phosphotransferases (GO:0016868)" FT /inference="protein motif:HMMPfam:PF02878 PGM_PMM_I FT InterPro:IPR005844 Phosphoglucomutase/phosphomannomutase FT alpha/beta/alpha domain I GO:Biological FT Process:carbohydrate metabolism (GO:0005975), Molecular FT Function:intramolecular transferase activity, FT phosphotransferases (GO:0016868)" FT /inference="protein motif:HMMPfam:PF02879 PGM_PMM_II FT InterPro:IPR005845 Phosphoglucomutase/phosphomannomutase FT alpha/beta/alpha domain II GO:Biological FT Process:carbohydrate metabolism (GO:0005975), Molecular FT Function:intramolecular transferase activity, FT phosphotransferases (GO:0016868)" FT /inference="protein motif:ScanRegExp:PS00710 PGM_PMM FT InterPro:IPR005841 Phosphoglucomutase/phosphomannomutase FT GO:Biological Process:carbohydrate metabolism (GO:0005975), FT Molecular Function:intramolecular transferase activity, FT phosphotransferases (GO:0016868)" FT /inference="protein motif:superfamily:SSF53738" FT /inference="protein motif:superfamily:SSF53738 FT Phosphoglucomutase, first 3 domains" FT /inference="protein motif:superfamily:SSF55957 FT Phosphoglucomutase, C-terminal domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33108.1" FT /translation="MRLFGTAGIRGRLWEKVTPELALKVGMAIGTYKGGTAVVARDGRT FT SSVMLKNAVISGLLASGMEVLDADLIPTPALAWATREHGDAGVMITASHNPPTDNGIKV FT FNGDGTEFYVEQEKELEGIVFSGNFRRAEWNEIKTVKPLDVIDDYIGAVLDFVNHETGL FT KVLYDGANGSGSVLAPYLLREMGAKVISVNAHVDGHFPGRRPEPRYENIAYLGELVKEL FT GVDLAIAQDGDADRIAVFDERGNYVDEDTVIALFAKHYVEENGGGTVVTSINTGSRIDE FT VVERAGGKVVRVPLGQPHDGIKKYGAIFAGEPWKLVHPKFGNWIDSFVTMALLIKMIDE FT NGPLSKLVSEIPVYYLRKENVPCPDGLKGKVVERAREELEKALGEEIKEILTISGYRFQ FT LRDGSWVLVRPSGTEPKIRVVVEGPSEKRRDELFELAYKTVAKEVEKLKRSARV" FT gene complement(577722..578537) FT /locus_tag="TGAM_0607" FT /note="tg0607" FT CDS complement(577722..578537) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0607" FT /product="Metal-dependent hydrolase, beta-lactamase FT superfamily" FT /db_xref="GOA:C5A4E7" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:C5A4E7" FT /inference="protein motif:CDD:ElaC, Metal-dependent FT hydrolases of the beta-lactamase superfamily III [General FT function prediction only]" FT /inference="protein motif:CDD:PhnP, Metal-dependent FT hydrolases of the beta-lactamase superfamily I [General FT function prediction only]" FT /inference="protein motif:COG:COG1235 Metal-dependent FT hydrolases of the beta-lactamase superfamily I; R General FT function prediction only" FT /inference="protein motif:Gene3D:G3D.3.60.15.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR13754 FAMILY NOT FT NAMED" FT /inference="protein motif:HMMPfam:PF00753 Lactamase_B FT InterPro:IPR001279 Beta-lactamase-like" FT /inference="protein motif:superfamily:SSF56281 FT Metallo-hydrolase/oxidoreductase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33109.1" FT /translation="MIEITFLGSGGGRFITITQFRSTGGFHIRASRNVYVDPGPGALVR FT SWRYKLDPRRLDAIFVSHRHVDHCNDLEVMVEAMTGGALKKRGVLIASKSVVYGDETHT FT PAISKYHIEVLESVHTPEPGNKIAIGEEEFLITPSQHSDPTTIGFRMKTAYGDISYIPD FT TAYFDGLVEWHDGARVLIAAITRPRDMGIPYHLSTDDAVEMLKSMEKKPEVLIMSHIGM FT KMHFANPYKEAKYIETVTGVKTYVAKEGFKVMVDKREIAVRTLRPARFV" FT gene 578602..579918 FT /gene="dapE" FT /gene_synonym="argE" FT /locus_tag="TGAM_0608" FT /note="tg0608" FT CDS 578602..579918 FT /codon_start=1 FT /transl_table=11 FT /gene="dapE" FT /gene_synonym="argE" FT /locus_tag="TGAM_0608" FT /product="Acetylornithine deacetylase or FT succinyl-diaminopimelate desuccinylase (DapE/ArgE)" FT /db_xref="GOA:C5A4E8" FT /db_xref="InterPro:IPR002933" FT /db_xref="InterPro:IPR010182" FT /db_xref="InterPro:IPR011650" FT /db_xref="UniProtKB/TrEMBL:C5A4E8" FT /inference="protein motif:CDD:ArgE, Acetylornithine FT deacetylase/Succinyl-diaminopimelate desuccinylase and FT related deacylases [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:Peptidase_M20, Peptidase FT family M20/M25/M40" FT /inference="protein motif:COG:COG0624 Acetylornithine FT deacetylase/Succinyl-diaminopimelate desuccinylase and FT related deacylases; E Amino acid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.630.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11014 FT ARGE/DAPE/ACY1 FAMILY PROTEIN" FT /inference="protein motif:HMMPanther:PTHR11014:SF8 FT SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE-RELATED" FT /inference="protein motif:HMMPfam:PF01546 Peptidase_M20 FT InterPro:IPR002933 Peptidase M20 GO:Biological FT Process:proteolysis (GO:0006508), Molecular FT Function:metallopeptidase activity (GO:0008237)" FT /inference="protein motif:HMMPfam:PF07687 M20_dimer FT InterPro:IPR011650 Peptidase dimerisation GO:Molecular FT Function:hydrolase activity (GO:0016787), Molecular FT Function:protein dimerization activity (GO:0046983)" FT /inference="protein motif:HMMTigr:TIGR01910 FT DapE-ArgE:acetylornithine deacetylase or s FT InterPro:IPR010182 Acetylornithine deacetylase or FT succinyl-diaminopimelate desuccinylase GO:Molecular FT Function:succinyl-diaminopimelate desuccinylase activity FT (GO:0009014), Biological Process:lysine biosynthesis FT (GO:0009085), Molecular Function:metal ion binding FT (GO:0046872)" FT /inference="protein motif:ScanRegExp:PS00318 FT HMG_COA_REDUCTASE_2 InterPro:IPR002202 FT Hydroxymethylglutaryl-coenzyme A reductase GO:Molecular FT Function:hydroxymethylglutaryl-CoA reductase (NADPH) FT activity (GO:0004420), Biological Process:biosynthesis FT (GO:0009058)" FT /inference="protein motif:superfamily:SSF53187 Zn-dependent FT exopeptidases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33110.1" FT /translation="MAESSLSSGEKWGLVIRMTQLGKVLKEVEGLRDEMIKTLVELIKI FT PAISPDYGGEGEYDKAQKLLEIIRDWPFDKVEVYNAPDKRAKNGVRPNILAYYYGEKGE FT ESERLWILTHLDVVPPGDLSKWTVTEPFKPLVKDGKVYGRGSEDNGQSLVASLYAVKAM FT MNLGIRPKRTVILAFVSDEETGSKYGIEWLMREHPELFREDDLVLVPDGGNEDGTFIEV FT AEKGILWFKLRVRGQQVHASMPDKGLNAHRVALDLAYNLDKKLHEKYSERDELFEPAES FT TFEPTMGGNPADSPNIIPGEHEVVFDCRVLPRYSLDDILKDVEGVVEEVKERHRKELDG FT KVLPEIEVEILQRADPAPPTDPEGEIVKLLKEAIKELRGKEAKVGGIGGGTFAAFFRRK FT GIPAVVWATLDEMAHQPNEYAKIDNMVEDAKVMAALALL" FT gene 580004..581251 FT /locus_tag="TGAM_0609" FT /note="tg0609" FT CDS 580004..581251 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0609" FT /product="Serine protease inhibitor, serpin" FT /note="Belong to MEROPS inhibitor family I4" FT /db_xref="GOA:C5A4E9" FT /db_xref="InterPro:IPR000215" FT /db_xref="InterPro:IPR023795" FT /db_xref="InterPro:IPR023796" FT /db_xref="UniProtKB/TrEMBL:C5A4E9" FT /inference="protein motif:CDD:alpha-1-antitrypsin_like, FT alpha-1-antitrypsin_like" FT /inference="protein motif:CDD:alpha2AP, Alpha2-antiplasmin FT (alpha2AP) is the primary inhibitor of plasmin, a FT proteinase that digests fibrin, the main component of blood FT clots" FT /inference="protein motif:CDD:angiotensinogen, FT Angiotensinogen is part of the renin-angiotensin system FT (RAS), which plays an important role in blood pressure FT regulation, renal haemodynamics, fluid and electrolyte FT homeostasis" FT /inference="protein motif:CDD:antithrombin-III_like, FT Antithrombin is a serine proteinase inhibitor (serpin) FT which controls the process of coagulation" FT /inference="protein motif:CDD:bacterial_SERPIN, SERine FT Proteinase INhibitors (serpins), prokaryotic subgroup" FT /inference="protein motif:CDD:C1_inh, C1 inhibitor (C1-Inh) FT is a protease inhibitor of the serpin family" FT /inference="protein motif:CDD:HCII, Heparin cofactor II FT (HCII) inhibits thrombin, the final protease of the FT coagulation cascade" FT /inference="protein motif:CDD:hsp47, Heat shock protein 47 FT (Hsp47), also called colligin, because of its collagen FT binding ability, is a chaperone specific for procollagen" FT /inference="protein motif:CDD:maspin_like, Maspin (mammary FT serine proteinase inhibitor), a member of the serpin FT superfamily, with a multitude of effects on cells and FT tissues at an assortment of developmental stages" FT /inference="protein motif:CDD:neuroserpin, Neuroserpin is a FT inhibitory member of the SERine Proteinase INhibitor FT (serpin) family that reacts preferentially with tissue-type FT plasminogen activator (tPA)" FT /inference="protein motif:CDD:ov-serpin, ovalbumin family FT of serpins (ov-serpins)" FT /inference="protein motif:CDD:ovalbumin_like, The FT ovalbumin_like group of serpins contains ovalbumin, the FT squamous cell carcinoma antigen 1 (SCCA1) and other closely FT related serpins of clade B of the serpin superfamily" FT /inference="protein motif:CDD:PAI-1_nexin-1, Plasminogen FT activator inhibitor-1_like" FT /inference="protein motif:CDD:PAI-2, Plasminogen Activator FT Inhibitor-2 (PAI-2)" FT /inference="protein motif:CDD:PEDF, Pigment FT epithelium-derived factor (PEDF)_like" FT /inference="protein motif:CDD:plant_SERPIN, SERine FT Proteinase INhibitors (serpins), plant specific subgroup" FT /inference="protein motif:CDD:PZI, Protein Z-dependent FT protease inhibitor (ZPI) is a member of the serpin FT superfamily of proteinase inhibitors (clade A10)" FT /inference="protein motif:CDD:SERPIN, SERine Proteinase FT INhibitors (serpins) exhibit conformational polymorphism FT shifting from native to cleaved, latent, delta, or FT polymorphic forms" FT /inference="protein motif:COG:COG4826 Serine protease FT inhibitor; O Posttranslational modification, protein FT turnover, chaperones" FT /inference="protein motif:Gene3D:G3D.3.30.497.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11461 SERINE FT PROTEINASE INHIBITOR InterPro:IPR000215 Proteinase FT inhibitor I4, serpin GO:Molecular Function:serine-type FT endopeptidase inhibitor activity (GO:0004867)" FT /inference="protein motif:HMMPanther:PTHR11461:SF66 SERINE FT PROTEINASE INHIBITOR" FT /inference="protein motif:HMMPfam:PF00079 Serpin FT InterPro:IPR000215 Proteinase inhibitor I4, serpin FT GO:Molecular Function:serine-type endopeptidase inhibitor FT activity (GO:0004867)" FT /inference="protein motif:HMMSmart:SM00093 no description FT InterPro:IPR000215 Proteinase inhibitor I4, serpin FT GO:Molecular Function:serine-type endopeptidase inhibitor FT activity (GO:0004867)" FT /inference="protein motif:ScanRegExp:PS00284 SERPIN FT InterPro:IPR000215 Proteinase inhibitor I4, serpin FT GO:Molecular Function:serine-type endopeptidase inhibitor FT activity (GO:0004867)" FT /inference="protein motif:superfamily:SSF56574 Serpins FT InterPro:IPR000215 Proteinase inhibitor I4, serpin FT GO:Molecular Function:serine-type endopeptidase inhibitor FT activity (GO:0004867)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33111.1" FT /translation="MRWVVPLLILIVLVSGCVSDVDNARFESSSSSSTQETTPNAGNSE FT WKNPVVGGMNSFAIELYKKLGENNGNVFFSPYSIETALTIAYEGARGATRDEMGNVLQL FT PGDNETRWKGFRGLILSLESNESSPFVLRSANALWVQSGYPVREDYLRIAKEYYLANAS FT DLDFQGNPEGAADVINDWVKNRTGGRIRDIISRLSPDTRLVITNAVYFKANWSSRFEAV FT NTKNETFYSPSGPVVVQMMHQTAKFLYFENDDLQAVELPYEGNRLGMLVILPREGRFEE FT VERQLNAEMISEIVANMTDEMVAVSIPKFKLEEDYHLKEVLMEMGVKRAFTRPDFAGIS FT ELEDLVISDVIHKTYISVAEKGTEAAAATAVIMTLAAPPENNLKVFRADRPFIFFIHDR FT ETGAILFMGRLMNPKE" FT gene 581281..582024 FT /locus_tag="TGAM_0610" FT /note="tg0610" FT CDS 581281..582024 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0610" FT /product="SAM-dependent methyltransferase, putative" FT /note="Belongs to DUF890 family" FT /db_xref="GOA:C5A4F0" FT /db_xref="InterPro:IPR010286" FT /db_xref="UniProtKB/TrEMBL:C5A4F0" FT /inference="protein motif:CDD:DUF890, Protein of unknown FT function (DUF890)" FT /inference="protein motif:CDD:HemK, Methylase of FT polypeptide chain release factors [Translation, ribosomal FT structure and biogenesis]" FT /inference="protein motif:COG:COG0500 SAM-dependent FT methyltransferases; Q Secondary metabolites biosynthesis, FT transport and catabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR18895 FT PROTOPORPHIROGEN OXIDASE-RELATED" FT /inference="protein motif:HMMPfam:PF05971 Methyltransf_10 FT InterPro:IPR010286 Protein of unknown function DUF890" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /protein_id="ACS33112.1" FT /translation="MPLWKDGKLGLPIKEAVTLFPELKDYLDERGRLDFSNREARILYN FT RAIAKALFGLEIEYHPRGLVTPPISRYLFLKTFLKGGEKVLEIGTGHTAMMALIAEKLF FT DCEVAATELDEEFFEYARRNIERNLARIRLIKSDGGIIRGVIPEGERFDVIFSAPPYYE FT RPTKGVLTEREGVGGGKYGEAFSVGLIEEARYYLRPGGKVALFLPDKKPLIGVIAEKGE FT ELGYSVRDVKFKVGTRWRHSLVLRL" FT gene 582163..582915 FT /gene="udp-1" FT /locus_tag="TGAM_0611" FT /note="tg0611" FT CDS 582163..582915 FT /codon_start=1 FT /transl_table=11 FT /gene="udp-1" FT /locus_tag="TGAM_0611" FT /product="Uridine phosphorylase (udp)" FT /EC_number="2.4.2.3" FT /db_xref="GOA:C5A4F1" FT /db_xref="InterPro:IPR000845" FT /db_xref="InterPro:IPR018017" FT /db_xref="UniProtKB/TrEMBL:C5A4F1" FT /inference="protein motif:CDD:DeoD, Purine-nucleoside FT phosphorylase [Nucleotide transport and metabolism]" FT /inference="protein motif:CDD:PNP_UDP_1, Phosphorylase FT family" FT /inference="protein motif:CDD:Udp, Uridine phosphorylase FT [Nucleotide transport and metabolism]" FT /inference="protein motif:COG:COG2820 Uridine FT phosphorylase; F Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.1580 no FT description" FT /inference="protein motif:HMMPfam:PF01048 PNP_UDP_1 FT InterPro:IPR000845 Purine and other phosphorylases, family FT 1 GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:nucleoside metabolism (GO:0009116)" FT /inference="protein motif:superfamily:SSF53167 Purine and FT uridine phosphorylases" FT /protein_id="ACS33113.1" FT /translation="MVFVWLGTGREVVKPWPGLERAPEKFLIVFTGIGLGHAEELLESV FT EVVEDCTYVYRALVGNYRGEKICVLNPYFGAPASVFALELAIASGGRYFIMVGEAGAIK FT EGIHIGDVILPTWALREEGTSYHYLPPEYTPRPSEKLLSMLEKEVRRQIGKRRIGVFRG FT GVWTTDAPFRETEDKVKEYAKRGILGVEMESSALMSVAEFRGVELAVALAVSDELYRGE FT WNVGFGSEKLRRAEELLVKSALEVLAAL" FT gene complement(583001..584368) FT /locus_tag="TGAM_0612" FT /note="tg0612" FT CDS complement(583001..584368) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0612" FT /product="SAM-dependent methyltransferase, putative" FT /db_xref="GOA:C5A4F2" FT /db_xref="InterPro:IPR002478" FT /db_xref="InterPro:IPR015947" FT /db_xref="InterPro:IPR019614" FT /db_xref="UniProtKB/TrEMBL:C5A4F2" FT /inference="protein motif:CDD:COG0742, N6-adenine-specific FT methylase [DNA replication, recombination, and repair]" FT /inference="protein motif:CDD:COG1092, Predicted FT SAM-dependent methyltransferases [General function FT prediction only]" FT /inference="protein motif:CDD:COG2520, Predicted FT methyltransferase [General function prediction only]" FT /inference="protein motif:CDD:Cons_hypoth95, Conserved FT hypothetical protein 95" FT /inference="protein motif:CDD:Met_10, Met-10+ like-protein" FT /inference="protein motif:CDD:PrmA, Ribosomal protein L11 FT methylase [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:PrmA, Ribosomal protein L11 FT methyltransferase (PrmA)" FT /inference="protein motif:CDD:PUA, Putative RNA-binding FT Domain in PseudoUridine synthase and Archaeosine FT transglycosylase" FT /inference="protein motif:CDD:Sun, tRNA and rRNA FT cytosine-C5-methylases [Translation, ribosomal structure FT and biogenesis]" FT /inference="protein motif:CDD:TrmA, SAM-dependent FT methyltransferases related to tRNA FT (uracil-5-)-methyltransferase [Translation, ribosomal FT structure and biogenesis]" FT /inference="protein motif:COG:COG1092 Predicted FT SAM-dependent methyltransferases; R General function FT prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR11061 RNA FT METHYLTRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR11061:SF5 RNA FT METHYLTRANSFERASE-RELATED" FT /inference="protein motif:HMMPfam:PF01472 PUA FT InterPro:IPR002478 PUA GO:Molecular Function:RNA binding FT (GO:0003723)" FT /inference="protein motif:HMMPfam:PF02475 Met_10 FT InterPro:IPR003402 Protein of unknown function Met10" FT /inference="protein motif:HMMSmart:SM00359 no description FT InterPro:IPR002478 PUA GO:Molecular Function:RNA binding FT (GO:0003723)" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:ProfileScan:PS50890 PUA FT InterPro:IPR002478 PUA GO:Molecular Function:RNA binding FT (GO:0003723)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /inference="protein motif:superfamily:SSF88697 PUA FT domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33114.1" FT /translation="MSSRNSLTTSKCIESPPGYIRFPELNTYRWRKWKILEEHQLGQPF FT KEGRVLASVVKMARVIVDAQAARAIGKGAMIVFKKGVVRTEGEFEPGDIVEVYTRGGKF FT LGRGFVNPNSNIMVRLLIKDRETPITKELFRERIKKANEYRKKVLGYDKAYRMVYGEAD FT YLPGLIVDRFNEIASVQISSVGMERFKLDVAEAIMEAEPEIETVFEKNTGRSRRREGLP FT EIERVLLGKEKYRTIIEEGKAKFIVDMRGQKTGFFLDQRENRIALEKYVKPGMRVLDVF FT TYTGGFAIHAAVAGADEVVAVDKSPWAINMVKENAKLNGVEDRMRYITGSAFPVMEEMI FT KKGEKFDIVILDPPAFVQHEKDLKRGLRAYFNVNHAGLKLVKEGGILVTCSCSQHVDMQ FT AFKDMVIAAAAKAGKFLKMLEPYRTQAPDHPILMASKDTEYLKCLFLYVEDMMLRT" FT gene 584331..584639 FT /locus_tag="TGAM_0613" FT /note="tg0613" FT CDS 584331..584639 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0613" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4F3" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33115.1" FT /translation="MHFEVVKEFLEDIGADWIEIEGEIHLDPEVFYEVWKYIGQPELKT FT YVVEDEVVEPGSYDPPEMKYTDVKKIKKKKVYFETLDGKRIVTDYAEFQRIAREKGS" FT gene complement(584649..585764) FT /locus_tag="TGAM_0614" FT /note="tg0614" FT CDS complement(584649..585764) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0614" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF112 family; 9 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR002823" FT /db_xref="UniProtKB/TrEMBL:C5A4F4" FT /inference="protein motif:CDD:COG1784, Predicted membrane FT protein [Function unknown]" FT /inference="protein motif:CDD:DUF112, Integral membrane FT protein DUF112" FT /inference="protein motif:COG:COG1784 Predicted membrane FT protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01970 DUF112 FT InterPro:IPR002823 Protein of unknown function DUF112, FT transmembrane" FT /protein_id="ACS33116.1" FT /translation="MLRELLIGLFLGTFTGLTPGIHVNTLAGMESSFYLLFAMGLTHTF FT LDAFPSTFLGVPDEGTALGVLPAHRLVLAGKGLEVLRIALLSSLLAVVFVIPFLPLYSR FT LVVLYSPTTGKVGVLFLLAFLLLSGRDKAPQAVLVIALSGVLGWTVLNQMNLKEPFYHL FT FTGLFGIPVIIASLQGKGTFPEQDKSPHVEWKPLIAFSIAGTVLGMVSSILPAFTASIG FT ATIATLFSRDERSFLAAVYSINTSNFLFGIINYSMTGRTRNGIAVALSRSGTKPPEVTV FT ILLSAILVGSIAVLLGSALPKPYLGLIKAINYRLLNATVVLFLLCLSLYFDGLYGLWVL FT LTGAAIGYLTQELGVRRTNCMAVLMIPILIR" FT gene complement(585746..586945) FT /locus_tag="TGAM_0615" FT /note="tg0615" FT CDS complement(585746..586945) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0615" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4F5" FT /protein_id="ACS33117.1" FT /translation="MMMSDRRLYTALALVALLSTAGLFALGENRDDSTKSFVGVCVKAE FT RSYSILFNSTDTLLVPEQLEIGKLYTLRGELEETRSGLRVSGKYFLRPYSAIPQWLEET FT EGAYWISRGRRHYLLTPDWVELGKPLDIQKGSLVRVLGVKYGSKFYPVKITHAGTPSRS FT IRDGMPALIRGTVLGTFGNENRIVLWNGREKLYIYLPHGQSLERGLKVEVLGRVRITSR FT VNVYVDDIGDVRRLGYPPTVPIDKTSIGKIGGGECLVLRVMKSGLVLNCTSLRLRGFKA FT RAGDMIKVRALNTGSSLVCLSCELALPRERLPNGICNFREGGFSKIAGRVEWVKRYGNG FT FGLANVTSGECWVLLKLPKSLGIEVKEGTVITAYGTFTDYRGKPALQVSSGDDVCSGNC FT " FT gene complement(586999..587736) FT /locus_tag="TGAM_0616" FT /note="tg0616" FT CDS complement(586999..587736) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0616" FT /product="RecA-superfamily ATPase implicated in signal FT transduction, putative" FT /db_xref="GOA:C5A4F6" FT /db_xref="InterPro:IPR010624" FT /db_xref="InterPro:IPR014774" FT /db_xref="UniProtKB/TrEMBL:C5A4F6" FT /inference="protein motif:CDD:FlaH, Predicted ATPases FT involved in biogenesis of archaeal flagella [Cell motility FT and secretion / Intracellular trafficking and secretion]" FT /inference="protein motif:CDD:KaiC, KaiC is a circadian FT clock protein primarily found in cyanobacteria KaiC is a FT RecA-like ATPase, having both Walker A and Walker B motifs" FT /inference="protein motif:CDD:RAD55, RecA-superfamily FT ATPases implicated in signal transduction [Signal FT transduction mechanisms]" FT /inference="protein motif:COG:COG0467 RecA-superfamily FT ATPases implicated in signal transduction; T Signal FT transduction mechanisms" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:ProfileScan:PS51146 KAIC FT InterPro:IPR010624 Circadian clock protein KaiC" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /protein_id="ACS33118.1" FT /translation="MVELDIERIETGVIDGLIQGGIPAGSVVLVLGDPKSGKTTFQTQF FT LYTQTVLHGTPGLAILVDMPKREFLENARLFGWDFSPILDEYLYLIDAYSHRIKSAPKF FT SFTEDVIIDPSNPLQIAKFVKETTTGLISGGYTGQLVGIITSLTPLFFESELIDIYKFL FT EELKDIAHRHKQVWLIEINTGIERPQVEAMVKAIVDGVIEMRMFEEGRTLRRYIRVYGM FT RRTPHSLSWFPYEITPTGLALRG" FT gene complement(587742..588488) FT /locus_tag="TGAM_0617" FT /note="tg0617" FT CDS complement(587742..588488) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0617" FT /product="RecA family AAA ATPase" FT /note="Contains 1 RecA_2 (PS50162) domain, 1 P_Loop FT (SSF52540) domain, 1 Kaic (PF06745) domain" FT /db_xref="GOA:C5A4F7" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR010624" FT /db_xref="InterPro:IPR014774" FT /db_xref="UniProtKB/TrEMBL:C5A4F7" FT /inference="protein motif:CDD:KaiC, KaiC" FT /inference="protein motif:CDD:KaiC, KaiC is a circadian FT clock protein primarily found in cyanobacteria KaiC is a FT RecA-like ATPase, having both Walker A and Walker B motifs" FT /inference="protein motif:CDD:RAD55, RecA-superfamily FT ATPases implicated in signal transduction [Signal FT transduction mechanisms]" FT /inference="protein motif:COG:COG0467 RecA-superfamily FT ATPases implicated in signal transduction; T Signal FT transduction mechanisms" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR13682 GLUTAMINE FT SYNTHETASE/DNA REPAIR PROTEIN-RELATED" FT /inference="protein motif:HMMPanther:PTHR13682:SF11 DNA FT REPAIR PROTEIN RAD51 [ARCHAEA]" FT /inference="protein motif:HMMPfam:PF06745 KaiC FT InterPro:IPR010624 Circadian clock protein KaiC" FT /inference="protein motif:ProfileScan:PS50162 RECA_2 FT InterPro:IPR001553 RecA bacterial DNA recombination FT GO:Molecular Function:DNA binding (GO:0003677), Molecular FT Function:ATP binding (GO:0005524), Biological Process:DNA FT metabolism (GO:0006259), Molecular Function:DNA-dependent FT ATPase activity (GO:0008094)" FT /inference="protein motif:ProfileScan:PS51146 KAIC FT InterPro:IPR010624 Circadian clock protein KaiC" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33119.1" FT /translation="MSRYDVARVKTGIPGLDDLIEGGFPKGTTVLVTGPTGTGKTTFAV FT QFVYKGAELYDEPGVIVTLEERAQDLRREMLSFGWDLKKYEDEGKIAIIDGVSSAVGLP FT SEERFALEEGLNVEGFLRYIYRVVKTIDAKRLVVDSIPSIAIRLREEKNIREVLLKLNT FT ILLEMGITSILTTEAEDPKRGKLSRYGVEEYVARGVILLDFIEKDVELKRYLLIRKMRE FT TKHAMKKYPFEITEDGIVVYPSGEIY" FT gene complement(588850..590832) FT /locus_tag="TGAM_0618" FT /note="tg0618" FT CDS complement(588850..590832) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0618" FT /product="DNA helicase, putative" FT /db_xref="GOA:C5A4F8" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR004483" FT /db_xref="UniProtKB/TrEMBL:C5A4F8" FT /inference="protein motif:CDD:COG1112, Superfamily I DNA FT and RNA helicases and helicase subunits [DNA replication, FT recombination, and repair]" FT /inference="protein motif:COG:COG1112 Superfamily I DNA and FT RNA helicases and helicase subunits; L Replication, FT recombination and repair" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR10887 RIBONUCLEASE FT R-RELATED" FT /inference="protein motif:HMMPanther:PTHR10887:SF58 DNA FT REPLICATION HELICASE DNA2-RELATED" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:HMMTigr:TIGR00376 TIGR00376:DNA FT helicase, putative InterPro:IPR004483 Putative DNA helicase FT GO:Molecular Function:DNA binding (GO:0003677), Molecular FT Function:ATP binding (GO:0005524)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /inference="protein motif:superfamily:SSF55781 GAF FT domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33120.1" FT /translation="MNENEKLSKFIAKLKVLVEMERKAEIEAMRAEMRRLSGREREKVG FT RAILGLNGKVIGEELGYFLVRYGREREIKTEISVGDLIVISKRDPLKSDLVGTVVEKGK FT RFITVALETVPEWALRGVRVDLYANDITFKRWLENIEALRESGRKALEFYLGLREPEES FT EEVEFNPFDRSLNASQRRAIARALGSPDFFLIHGPFGTGKTRTLVELIRQEVARGHRVL FT ATAESNVAVDNIVERLVDSGLKVVRVGHPSRVSKALHETTLAYLMTQHELYGELRELRV FT IGENLKEKRDTFTKPAPKYRRGLTDKQILRLAERGIGTRGVPARLIREMAQWLKINEQV FT QKTFDDARKLEERIAREIIREANVVLTTNSSAGLEVVDYGSYDVAIIDEATQATIPSVL FT IPINRARRFVLAGDHKQLPPTILSERAKELSKTLFEGLIERYPWKSEMLTVQYRMNERL FT MEFPSREFYNGRIKADESVRNITLADLGVELPKGDDVWAEVLKPENVLVFVDTAKREDR FT FERQRYGSESRENPLEARLVEEAVEGLLKLGIKPEWVGVITPYDDQRDLISSLLPEEIE FT VKTVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRRLNVSLTRAKRKLILIGDSSTLSS FT HPTYKRLVEFVRKRETYVSLKSSEV" FT gene complement(590964..591257) FT /locus_tag="TGAM_0619" FT /note="tg0619" FT CDS complement(590964..591257) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0619" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4F9" FT /protein_id="ACS33121.1" FT /translation="MKPFVSAKSEELLFEILKEGLFWAAWGRPSEVMPFLRGKLLGNGF FT SESSKRQLEWLLDELQRFYERVACCGRVEEKHVRAIKSFHRDIVSVIFSERA" FT gene 591498..592895 FT /gene="nadB" FT /locus_tag="TGAM_0620" FT /note="tg0620" FT CDS 591498..592895 FT /codon_start=1 FT /transl_table=11 FT /gene="nadB" FT /locus_tag="TGAM_0620" FT /product="L-aspartate oxidase (quinolinate synthetase B) FT (nadB)" FT /EC_number="1.4.3.16" FT /db_xref="GOA:C5A4G0" FT /db_xref="InterPro:IPR003953" FT /db_xref="InterPro:IPR004112" FT /db_xref="InterPro:IPR005288" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR015939" FT /db_xref="UniProtKB/TrEMBL:C5A4G0" FT /inference="protein motif:CDD:FAD_binding_2, FAD binding FT domain" FT /inference="protein motif:CDD:NadB, Aspartate oxidase FT [Coenzyme metabolism]" FT /inference="protein motif:CDD:SdhA, Succinate FT dehydrogenase/fumarate reductase, flavoprotein subunit FT [Energy production and conversion]" FT /inference="protein motif:COG:COG0029 Aspartate oxidase; H FT Coenzyme transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.50.50.60 no FT description" FT /inference="protein motif:HMMPanther:PTHR11632 REDUCTASE FT FLAVOPROTEIN SUBUNIT-RELATED" FT /inference="protein motif:HMMPanther:PTHR11632:SF9 FT L-ASPARTATE OXIDASE" FT /inference="protein motif:HMMPfam:PF00890 FAD_binding_2 FT InterPro:IPR003953 Fumarate reductase/succinate FT dehydrogenase flavoprotein, N-terminal GO:Biological FT Process:electron transport (GO:0006118), Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:HMMPfam:PF02910 Succ_DH_flav_C FT InterPro:IPR004112 Fumarate reductase/succinate FT dehydrogenase flavoprotein, C-terminal GO:Biological FT Process:electron transport (GO:0006118), Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:HMMTigr:TIGR00551 FT nadB:L-aspartate oxidase InterPro:IPR005288 L-aspartate FT oxidase GO:Cellular Component:cytoplasm (GO:0005737), FT Molecular Function:L-aspartate oxidase activity FT (GO:0008734), Biological Process:NAD biosynthesis FT (GO:0009435)" FT /inference="protein motif:superfamily:SSF46977 Succinate FT dehydrogenase/fumarate reductase flavoprotein C-terminal FT domain InterPro:IPR004112 Fumarate reductase/succinate FT dehydrogenase flavoprotein, C-terminal GO:Biological FT Process:electron transport (GO:0006118), Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:superfamily:SSF51905 FT FAD/NAD(P)-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33122.1" FT /translation="MKIGIVGDGIAGLTSAIALVKRGFDVTLIGPGIRKSNSYLAQAGI FT AFPVLEGDSLEAHVLDTIKAGKYINDREVVWNIISKASEAYDFLTSLGLKFEASETEGG FT HSFHRVFTIKNETGKHVTKLLYLRARELGVNFVRGKTEELATKRGKACGVFVEGEFLRF FT DATVIASGGFSGLFKFTAGSPENTGLIIGDAVMKGSPARDLEFVQFHPTGYIGKKGVFL FT ISEAVRGAGAKLVTEDGERFVNELATRDIVARAIYRQMQTGKKVFLDATGIENFKKRFP FT QIYAFLRKDGIDPSMDLIPVSPIAHYTMGGIAVDLWYRTSLKNLYAIGEAMSNGFHGAN FT RLASNSLVECIVSGLEVARTIARERPRCREVKEPHYHGYEPGDVDSLRELLWEHAGIVR FT SAKTLREGLQKLEGIEADPRLKLLAKGVLECALAREESRGSHYREDFPVMRKAFERPSF FT FDGRCRL" FT gene 592956..593864 FT /gene="nadA" FT /locus_tag="TGAM_0621" FT /note="tg0621" FT CDS 592956..593864 FT /codon_start=1 FT /transl_table=11 FT /gene="nadA" FT /locus_tag="TGAM_0621" FT /product="Quinolinate synthetase A (nadA)" FT /db_xref="GOA:C5A4G1" FT /db_xref="InterPro:IPR003473" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR023066" FT /db_xref="UniProtKB/Swiss-Prot:C5A4G1" FT /inference="protein motif:CDD:NadA, Quinolinate synthetase FT A protein" FT /inference="protein motif:COG:COG0379 Quinolinate synthase; FT H Coenzyme transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.90.870.10 no FT description" FT /inference="protein motif:HMMPfam:PF02445 NadA FT InterPro:IPR003473 Quinolinate synthetase A GO:Molecular FT Function:quinolinate synthetase A activity (GO:0008987), FT Biological Process:NAD biosynthesis (GO:0009435)" FT /inference="protein motif:HMMTigr:TIGR00550 FT nadA:quinolinate synthetase complex, A subu FT InterPro:IPR003473 Quinolinate synthetase A GO:Molecular FT Function:quinolinate synthetase A activity (GO:0008987), FT Biological Process:NAD biosynthesis (GO:0009435)" FT /inference="protein motif:superfamily:SSF55821 YrdC/RibB" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33123.1" FT /translation="MDREKLIAEIEKLKEERNAIIMAHNYQLPEVQDIADFLGDSLELA FT RKAVNVDAEVIVFAGVDFMAETAKILNPEKTVLLPAKTATCAMANMLQVEHILEAKRRY FT PNAPVVLYVNSSAEAKAHADVTVTSANAVKIVEKLDSNVVIFGPDKNLGSYVARVTGKR FT VIPVPPDGHCYVHRKFTVEDVERARRRYPNAKLMVHPECEPEVQERADIIASTGGMIRH FT APEWNEWVVFTEREMVYRLSRLYPNIKFYPAREDAVCVGMKAITLESIYESLRDMKYRV FT EVPEEIAKKAKRAIERMLEMS" FT gene 593995..594552 FT /locus_tag="TGAM_0622" FT /note="tg0622" FT CDS 593995..594552 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0622" FT /product="Conserved hypothetical protein" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4G2" FT /inference="protein motif:CDD:HdeD, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:COG:COG3247 Uncharacterized FT conserved protein; S Function unknown" FT /protein_id="ACS33124.1" FT /translation="MAQYGIMEKKWVWMLLLGVVFMTLGFAGLMMLPLMTLSSVAVFGA FT FMLVGGILQVLHGLTKAKDWKSAGVHTLMGLVYVLAGIFTIENPILASATLTLLLGVSL FT IVIGTLRMGVAFQNKDVNQWPAMVFSGLLTVLLGLFIVLQWPWSSLWAIGLYVSVDLIM FT SGANFVAIALAAKTAGERSSPA" FT gene complement(594555..595796) FT /locus_tag="TGAM_0623" FT /note="tg0623" FT CDS complement(594555..595796) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0623" FT /product="Sugar-phosphate nucleotydyltransferase" FT /db_xref="GOA:C5A4G3" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:C5A4G3" FT /inference="protein motif:CDD:GalU, UDP-glucose FT pyrophosphorylase [Cell envelope biogenesis, outer FT membrane]" FT /inference="protein motif:CDD:GCD1, FT Nucleoside-diphosphate-sugar pyrophosphorylase involved in FT lipopolysaccharide biosynthesis/translation initiation FT factor 2B, gamma/epsilon subunits FT (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, FT outer membrane / Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:GlgC, ADP-glucose FT pyrophosphorylase [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:GlmU, FT N-acetylglucosamine-1-phosphate uridyltransferase (contains FT nucleotidyltransferase and I-patch acetyltransferase FT domains) [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:NTP_transferase, Nucleotidyl FT transferase" FT /inference="protein motif:CDD:RfbA, dTDP-glucose FT pyrophosphorylase [Cell envelope biogenesis, outer FT membrane]" FT /inference="protein motif:COG:COG1208 FT Nucleoside-diphosphate-sugar pyrophosphorylase involved in FT lipopolysaccharide biosynthesis/translation initiation FT factor 2B, gamma/epsilon subunits FT (eIF-2Bgamma/eIF-2Bepsilon); M Cell wall/membrane/envelope FT biogenesis" FT /inference="protein motif:Gene3D:G3D.3.90.550.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR19136 FT SUGAR-PHOSPHATE NUCLEOTIDYL TRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR19136:SF39 SUGAR FT PHOSPHATE NUCLEOTIDYL TRANSFERASE" FT /inference="protein motif:HMMPfam:PF00132 Hexapep FT InterPro:IPR001451 Bacterial transferase hexapeptide FT repeat" FT /inference="protein motif:HMMPfam:PF00483 NTP_transferase FT InterPro:IPR005835 Nucleotidyl transferase GO:Biological FT Process:biosynthesis (GO:0009058), Molecular FT Function:nucleotidyltransferase activity (GO:0016779)" FT /inference="protein motif:superfamily:SSF53448 FT Nucleotide-diphospho-sugar transferases" FT /protein_id="ACS33125.1" FT /translation="MIKKAVIPIGGEATRLRPLTIETSKGLVRLLNKPILEHSILSLAR FT DGVEEVYLGVKGYVNYTTLFDYFREGYWLKKKYGLEKEVRIRYMPRYESTTNGDAVWYT FT MHYYGIREPVVVIQGDNIYQLNIGEMYEWHRKKGAFMTIALQPVDDVTGFGVAKIDDDY FT RIEYFVEKPSPEEAPSNLANTGIYILSKDFWSFLEDEWAAEMREERKLDFGGDIIPALI FT EHGYAVYGYPMKGYWFDIGTPERYLRAAMYLLHHLSPEDMEAVEITRDVYMQGKSEMSE FT RLRRRIREMIKRGELLVEGKVLLGRHISIGKGTALEDAIIDNYSMVGKSCEILHSVVMD FT RVKLGNNVRIMNSIIGRHVEIGDNVRIVNSVIGDNAIISDNVRMYNVKIWPHEFVEKGA FT TLEHYTVRHMAPKR" FT gene 595904..596737 FT /gene="nadC-2" FT /locus_tag="TGAM_0624" FT /note="tg0624" FT CDS 595904..596737 FT /codon_start=1 FT /transl_table=11 FT /gene="nadC-2" FT /locus_tag="TGAM_0624" FT /product="Nicotinate-nucleotide pyrophosphorylase FT (Quinolinate phosphoribosyltransferase) (nadC)" FT /EC_number="2.4.2.19" FT /db_xref="GOA:C5A4G4" FT /db_xref="InterPro:IPR002638" FT /db_xref="InterPro:IPR004393" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR022412" FT /db_xref="UniProtKB/TrEMBL:C5A4G4" FT /inference="protein motif:BlastProDom:PD003988 FT Q9V2R4_PYRAB_Q9V2R4; InterPro:IPR002638 Quinolinate FT phosphoribosyl transferase GO:Molecular FT Function:nicotinate-nucleotide diphosphorylase FT (carboxylating) activity (GO:0004514), Biological FT Process:NAD biosynthesis (GO:0009435)" FT /inference="protein motif:CDD:modD_like, ModD" FT /inference="protein motif:CDD:NadC, Nicotinate-nucleotide FT pyrophosphorylase [Coenzyme metabolism]" FT /inference="protein motif:CDD:NAPRTase_B, Nicotinate FT phosphoribosyltransferase (NAPRTase), subgroup B" FT /inference="protein motif:CDD:PRTase_typeII, FT Phosphoribosyltransferase (PRTase) type II" FT /inference="protein motif:CDD:QPRTase, Quinolinate FT phosphoribosyl transferase (QAPRTase or QPRTase), also FT called nicotinate-nucleotide pyrophosphorylase, is involved FT in the de novo synthesis of NAD in both prokaryotes and FT eukaryotes" FT /inference="protein motif:CDD:QPRTase_NadC, Quinolinate FT phosphoribosyl transferase (QAPRTase or QPRTase), also FT called nicotinate-nucleotide pyrophosphorylase, is involved FT in the de novo synthesis of NAD in both prokaryotes and FT eukaryotes" FT /inference="protein motif:CDD:QRPTase_C, Quinolinate FT phosphoribosyl transferase, C-terminal domain" FT /inference="protein motif:CDD:QRPTase_N, Quinolinate FT phosphoribosyl transferase, N-terminal domain" FT /inference="protein motif:COG:COG0157 Nicotinate-nucleotide FT pyrophosphorylase; H Coenzyme transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.20.200 no FT description" FT /inference="protein motif:HMMPanther:PTHR11948 FT NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE-RELATED FT InterPro:IPR004393 Nicotinate-nucleotide pyrophosphorylase FT GO:Molecular Function:nicotinate-nucleotide diphosphorylase FT (carboxylating) activity (GO:0004514), Biological FT Process:pyridine nucleotide biosynthesis (GO:0019363)" FT /inference="protein motif:HMMPanther:PTHR11948:SF1 FT NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE-RELATED" FT /inference="protein motif:HMMPfam:PF01729 QRPTase_C FT InterPro:IPR002638 Quinolinate phosphoribosyl transferase FT GO:Molecular Function:nicotinate-nucleotide diphosphorylase FT (carboxylating) activity (GO:0004514), Biological FT Process:NAD biosynthesis (GO:0009435)" FT /inference="protein motif:HMMPfam:PF02749 QRPTase_N FT InterPro:IPR002638 Quinolinate phosphoribosyl transferase FT GO:Molecular Function:nicotinate-nucleotide diphosphorylase FT (carboxylating) activity (GO:0004514), Biological FT Process:NAD biosynthesis (GO:0009435)" FT /inference="protein motif:HMMTigr:TIGR00078 FT nadC:nicotinate-nucleotide pyrophosphorylas FT InterPro:IPR004393 Nicotinate-nucleotide pyrophosphorylase FT GO:Molecular Function:nicotinate-nucleotide diphosphorylase FT (carboxylating) activity (GO:0004514), Biological FT Process:pyridine nucleotide biosynthesis (GO:0019363)" FT /inference="protein motif:superfamily:SSF51690 Quinolinic FT acid phosphoribosyltransferase (Nicotinate-nucleotide FT pyrophosphorylase, NadC), C-terminal domain" FT /inference="protein motif:superfamily:SSF54675 Quinolinic FT acid phosphoribosyltransferase (Nicotinate-nucleotide FT pyrophosphorylase, NadC), N-terminal domain" FT /protein_id="ACS33126.1" FT /translation="MVGLNYLLRFLEEDSPFGDVTSEAVIPEGTKARAVIIAKQDGVIA FT GVEEAKALFEYFGAKVSARKHDGEEVKRGDVILELEGDARAILLVERTALNVMGRMSGI FT ATEVRKLVERVKAVNPKVRVAGTRKSLLKPIDKRAIIIGGGEPHRFSLSDAMLIKDNHL FT ALVPLEEAIRRAKSFSVYKVVEVEVESLEDALRAAKVGADVILLDNMSPGEIAETIDAL FT KREGLRDRVKIEVSGGITPENIEEYAKLDVDVISLGYLTHSVKNFDVSLEVIGKM" FT gene 596807..597703 FT /locus_tag="TGAM_0625" FT /note="tg0625" FT CDS 596807..597703 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0625" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4G5" FT /protein_id="ACS33127.1" FT /translation="MGVSKMGRITVLSLIVLLSLSLETALVSAGAILVDVRVLNQTGED FT SYVPKIFLNETAAGQYSYTLLVMNVTAKDLGDGYFSVGIRGLVIDEFPSTLNLTGRWIN FT MTFKVKSKTNTFVLDGQGAFFPLYIVFPESKTLFHLGEQLQVKDNVLQMLQPPSNRTVK FT LVGKYVKVYTKPIEVNSVDVRSRKYFNYTICNVLPPELQRKLNMTKGSSCFLQRTPYLD FT GSFLGHKPLSIMALYPRDPFGVSSGPVILSVDYIPTSPDELKGQETPNNRDLLKPIGIG FT AIIVAAAGVALTRRGGR" FT gene 597700..598479 FT /locus_tag="TGAM_0626" FT /note="tg0626" FT CDS 597700..598479 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0626" FT /product="Conserved hypothetical protein" FT /note="6 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4G6" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33128.1" FT /translation="MKPVGVEISSKRSLLAVMILLPLIIAGSAWYVMSEPISVGVTQRS FT FMTPPDQLNASLHRTLEGLGDFFYRVSDVQKDIFTKGLRVLLLGVFIGVTLVSSLILIR FT PLSDGTMAFEIGLVRDKKRVLLYRTAPIIVYSAYVSIILALFAYSVFPLKAGLPFDFDK FT GLWLFVVLFLSGMWGVTLTALVGFYTCEPAYPVIVSFLVSLTSFTGAGDLFFPYYRLLN FT ALWVDVKLLNTWSIAGLGLLFVSAFIALHKFERGEYY" FT gene 598476..598877 FT /locus_tag="TGAM_0627" FT /note="tg0627" FT CDS 598476..598877 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0627" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4G7" FT /protein_id="ACS33129.1" FT /translation="MRLFKTLLVSSLLFAAFTFLLFQSMAQEKVNIVFYQTGYDPETYT FT VQYVDTTLPLAGEYSVQGDNVTVLTVEGRHGGHFRTSLRAVRLVGVFNTSDDVEVELHP FT KVGMPWGVLLGVVLSGGVFGYAFRVLGFE" FT gene 598870..599622 FT /locus_tag="TGAM_0628" FT /note="tg0628" FT CDS 598870..599622 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0628" FT /product="ABC-type transport protein, ATPase component" FT /db_xref="GOA:C5A4G8" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:C5A4G8" FT /inference="protein motif:BlastProDom:PD000006 FT Q8U0R2_PYRFU_Q8U0R2; InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:CDD:AbcC, ABC-type metal ion FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ABCC_ATM1_transporter, ATM1 FT is an ABC transporter that is expressed in the FT mitochondria" FT /inference="protein motif:CDD:ABCC_bacteriocin_exporters, FT ABC-type bacteriocin exporters" FT /inference="protein motif:CDD:ABCC_cytochrome_bd, The CYD FT subfamily implicated in cytochrome bd biogenesis" FT /inference="protein motif:CDD:ABCC_Glucan_exporter_like, FT Glucan exporter ATP-binding protein" FT /inference="protein motif:CDD:ABCC_Hemolysin, The FT ABC-transporter hemolysin B is a central component of the FT secretion machinery that translocates the toxin, hemolysin FT A, in a Sec-independent fashion across both membranes of E" FT /inference="protein motif:CDD:ABCC_MRP_domain1, Domain 1 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_domain2, Domain 2 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_Like, The MRP FT (Mutidrug Resistance Protein)-like transporters are FT involved in drug, peptide, and lipid export" FT /inference="protein motif:CDD:ABCC_MsbA, MsbA is an FT essential ABC transporter, closely related to eukaryotic FT MDR proteins" FT /inference="protein motif:CDD:ABCC_NFT1, Domain 2 of NFT1 FT (New full-length MRP-type transporter 1)" FT /inference="protein motif:CDD:ABCC_Protease_Secretion, This FT family represents the ABC component of the protease FT secretion system PrtD, a 60-kDa integral membrane protein FT sharing 37% identity with HlyB, the ABC component of the FT alpha-hemolysin secretion pathway, in the C-terminal FT domain" FT /inference="protein motif:CDD:ABCC_TAP, TAP, the FT Transporter Associated with Antigen Processing" FT /inference="protein motif:CDD:ABCF_EF-3, ABCF_EF-3 FT Elongation factor 3 (EF-3) is a cytosolic protein required FT by fungal ribosomes for in vitro protein synthesis and for FT in vivo growth" FT /inference="protein motif:CDD:ABCG_EPDR, ABCG transporters FT are involved in eye pigment (EP) precursor transport, FT regulation of lipid-trafficking mechanisms, and pleiotropic FT drug resistance (DR)" FT /inference="protein motif:CDD:ABCG_White, The White FT subfamily represents ABC transporters homologous to the FT Drosophila white gene, which acts as a dimeric importer for FT eye pigment precursors" FT /inference="protein motif:CDD:ABC_ATPase, ABC (ATP-binding FT cassette) transporter nucleotide-binding domain" FT /inference="protein motif:CDD:ABC_BcrA_bacitracin_resist, FT The BcrA subfamily represents ABC transporters involved in FT peptide antibiotic resistance" FT /inference="protein motif:CDD:ABC_Carb_Monos_I, This family FT represents the domain I of the carbohydrate uptake proteins FT that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Monos_II, This FT family represents domain II of the carbohydrate uptake FT proteins that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Solutes_like, ABC FT Carbohydrate and Solute Transporters-like subgroup" FT /inference="protein motif:CDD:ABC_CcmA_heme_exporter, CcmA, FT the ATP-binding component of the bacterial CcmAB FT transporter" FT /inference="protein motif:CDD:ABC_Class3, This class is FT comprised of all BPD (Binding Protein Dependent) systems FT that are largely represented in archaea and eubacteria and FT are primarily involved in scavenging solutes from the FT environment" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain1, FT Domain I of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain2, FT Domain II of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_CysA_sulfate_importer, FT Part of the ABC transporter complex cysAWTP involved in FT sulfate import" FT /inference="protein motif:CDD:ABC_DrrA, DrrA is the FT ATP-binding protein component of a bacterial exporter FT complex that confers resistance to the antibiotics FT daunorubicin and doxorubicin" FT /inference="protein motif:CDD:ABC_drug_resistance_like, FT ABC-type multidrug transport system, ATPase component" FT /inference="protein motif:CDD:ABC_DR_subfamily_A, This FT family of ATP-binding proteins belongs to a multisubunit FT transporter involved in drug resistance (BcrA and DrrA), FT nodulation, lipid transport, and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_FeS_Assembly, ABC-type FT transport system involved in Fe-S cluster assembly, ATPase FT component" FT /inference="protein motif:CDD:ABC_FtsE_transporter, FtsE is FT a hydrophilic nucleotide-binding protein that binds FtsX to FT form a heterodimeric ATP-binding cassette (ABC)-type FT transporter that associates with the bacterial inner FT membrane" FT /inference="protein motif:CDD:ABC_HisP_GlnQ_permeases, HisP FT and GlnQ are the ATP-binding components of the bacterial FT periplasmic histidine and glutamine permeases, repectively" FT /inference="protein FT motif:CDD:ABC_Iron-Siderophores_B12_Hemin, ABC FT transporters, involved in the uptake of siderophores, heme, FT and vitamin B12, are widely conserved in bacteria and FT archaea" FT /inference="protein motif:CDD:ABC_KpsT_Wzt, ABC_KpsT_Wzt FT The KpsT/Wzt ABC transporter subfamily is involved in FT extracellular polysaccharide export" FT /inference="protein motif:CDD:ABC_MalK_N, The N-terminal FT ATPase domain of the maltose transporter, MalK" FT /inference="protein motif:CDD:ABC_Metallic_Cations, ABC FT component of the metal-type transporters" FT /inference="protein FT motif:CDD:ABC_MetN_methionine_transporter, MetN (also known FT as YusC) is an ABC-type transporter encoded by metN of the FT metNPQ operon in Bacillus subtilis that is involved in FT methionine transport" FT /inference="protein motif:CDD:ABC_MJ0796_Lo1CDE_FtsE, This FT family is comprised of MJ0796 ATP-binding cassette, FT macrolide-specific ABC-type efflux carrier (MacAB), and FT proteins involved in cell division (FtsE), and release of FT liporoteins from the cytoplasmic membrane (LolCDE)" FT /inference="protein motif:CDD:ABC_Mj1267_LivG_branched, The FT Mj1267/LivG ABC transporter subfamily is involved in the FT transport of the hydrophobic amino acids leucine, FT isoleucine and valine" FT /inference="protein motif:CDD:ABC_ModC_like, Archeal FT protein closely related to ModC" FT /inference="protein FT motif:CDD:ABC_ModC_molybdenum_transporter, ModC is an FT ABC-type transporter and the ATPase component of a FT molybdate transport system that also includes the FT periplasmic binding protein ModA and the membrane protein FT ModB" FT /inference="protein motif:CDD:ABC_MTABC3_MDL1_MDL2, MTABC3 FT (also known as ABCB6) is a mitochondrial ATP-binding FT cassette protein involved in iron homeostasis and one of FT four ABC transporters expressed in the mitochondrial inner FT membrane, the other three being MDL1(ABC7), MDL2, and ATM1" FT /inference="protein motif:CDD:ABC_NatA_like, Similar in FT sequence to NatA, this is the ATPase component of a FT bacterial ABC-type Na+ transport system called NatAB, which FT catalyzes ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled to proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NatA_sodium_exporter, FT NatA is the ATPase component of a bacterial ABC-type Na+ FT transport system called NatAB, which catalyzes FT ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NikE_OppD_transporters, FT The ABC transporter subfamily specific for the transport of FT dipeptides, oligopeptides (OppD), and nickel (NikDE)" FT /inference="protein motif:CDD:ABC_NrtD_SsuB_transporters, FT NrtD and SsuB are the ATP-binding subunits of the bacterial FT ABC-type nitrate and sulfonate transport systems, FT respectively" FT /inference="protein motif:CDD:ABC_OpuCA_Osmoprotection, FT OpuCA is a the ATP binding component of a bacterial solute FT transporter that serves a protective role to cells growing FT in a hyperosmolar environment" FT /inference="protein motif:CDD:ABC_Org_Solvent_Resistant, FT ABC (ATP-binding cassette) transport system involved in FT resistant to organic solvents" FT /inference="protein motif:CDD:ABC_PhnC_transporter, FT ABC-type phosphate/phosphonate transport system" FT /inference="protein motif:CDD:ABC_PotA_N, PotA is an FT ABC-type transporter and the ATPase component of the FT spermidine/putrescine-preferential uptake system consisting FT of PotA, -B, -C, and -D" FT /inference="protein motif:CDD:ABC_Pro_Gly_Bertaine, This FT family comprises the glycine betaine/L-proline ATP binding FT subunit in bacteria and its equivalents in archaea" FT /inference="protein FT motif:CDD:ABC_PstB_phosphate_transporter, Phosphate uptake FT is of fundamental importance in the cell physiology of FT bacteria because phosphate is required as a nutrient" FT /inference="protein motif:CDD:ABC_putative_ATPase, This FT subfamily is involved in drug resistance, nodulation, lipid FT transport, and bacteriocin and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor_domain1, FT The ATPase domain 1 of RNase L inhibitor" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor_domain2, FT The ATPase domain 2 of RNase L inhibitor" FT /inference="protein motif:CDD:ABC_subfamily_A, The ABCA FT subfamily mediates the transport of a variety of lipid FT compounds" FT /inference="protein FT motif:CDD:ABC_ThiQ_thiamine_transporter, ABC-type thiamine FT tranport system" FT /inference="protein motif:CDD:ABC_TM1139_LivF_branched, FT LivF (TM1139) is part of the LIV-I bacterial ABC-type FT two-component transport system that imports neutral, FT branched-chain amino acids" FT /inference="protein motif:CDD:ABC_tran, ABC transporter" FT /inference="protein motif:CDD:ABC_YhbG, The ABC FT transporters belonging to the YhbG family are similar to FT members of the Mj1267_LivG family, which is involved in the FT transport of branched-chain amino acids" FT /inference="protein motif:CDD:AppF, ABC-type oligopeptide FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ArpD, ABC-type FT protease/lipase transport system, ATPase and permease FT components [General function prediction only]" FT /inference="protein motif:CDD:ArtP, ABC-type arginine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:CbiO, ABC-type cobalt FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:CcmA, ABC-type multidrug FT transport system, ATPase component [Defense mechanisms]" FT /inference="protein motif:CDD:CcmA, ABC-type transport FT system involved in cytochrome c biogenesis, ATPase FT component [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:CeuD, ABC-type enterochelin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG1123, ATPase components of FT various ABC-type transport systems, contain duplicated FT ATPase [General function prediction only]" FT /inference="protein motif:CDD:COG1245, Predicted ATPase, FT RNase L inhibitor (RLI) homolog [General function FT prediction only]" FT /inference="protein motif:CDD:COG3638, ABC-type FT phosphate/phosphonate transport system, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:COG3845, ABC-type FT uncharacterized transport systems, ATPase components FT [General function prediction only]" FT /inference="protein motif:CDD:COG4136, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4152, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4172, ABC-type FT uncharacterized transport system, duplicated ATPase FT component [General function prediction only]" FT /inference="protein motif:CDD:COG4181, Predicted ABC-type FT transport system involved in lysophospholipase L1 FT biosynthesis, ATPase component [Secondary metabolites FT biosynthesis, transport, and catabolism]" FT /inference="protein motif:CDD:COG4559, ABC-type hemin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG4586, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4619, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4674, Uncharacterized FT ABC-type transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:CydC, ABC-type transport FT system involved in cytochrome bd biosynthesis, fused ATPase FT and permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CydD, ABC-type transport FT system involved in cytochrome bd biosynthesis, ATPase and FT permease components [Energy production and conversion / FT Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:CysA, ABC-type FT sulfate/molybdate transport systems, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:DppD, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:DppF, ABC-type FT dipeptide/oligopeptide/nickel transport system, ATPase FT component [Amino acid transport and metabolism / Inorganic FT ion transport and metabolism]" FT /inference="protein motif:CDD:FepC, ABC-type FT cobalamin/Fe3+-siderophores transport systems, ATPase FT components [Inorganic ion transport and metabolism / FT Coenzyme metabolism]" FT /inference="protein motif:CDD:FtsE, Predicted ATPase FT involved in cell division [Cell division and chromosome FT partitioning]" FT /inference="protein motif:CDD:GlnQ, ABC-type polar amino FT acid transport system, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:HisP, ABC-type histidine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:LivF, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:LivG, ABC-type branched-chain FT amino acid transport systems, ATPase component [Amino acid FT transport and metabolism]" FT /inference="protein motif:CDD:MalK, ABC-type sugar FT transport systems, ATPase components [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:CDD:MdlB, ABC-type multidrug FT transport system, ATPase and permease components [Defense FT mechanisms]" FT /inference="protein motif:CDD:MglA, ABC-type sugar FT transport system, ATPase component [Carbohydrate transport FT and metabolism]" FT /inference="protein motif:CDD:ModC, ABC-type molybdate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ModF, ABC-type molybdenum FT transport system, ATPase component/photorepair protein PhrA FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NatA, ABC-type Na+ transport FT system, ATPase component [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:OpuBA, ABC-type FT proline/glycine betaine transport systems, ATPase FT components [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type phosphonate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PhnK, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:PotA, ABC-type FT spermidine/putrescine transport systems, ATPase components FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:ProV, ABC-type FT proline/glycine betaine transport system, ATPase component FT [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PstB, ABC-type phosphate FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:PvdE, ABC-type siderophore FT export system, fused ATPase and permease components FT [Secondary metabolites biosynthesis, transport, and FT catabolism / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:SalX, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapD, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SapF, ABC-type antimicrobial FT peptide transport system, ATPase component [Defense FT mechanisms]" FT /inference="protein motif:CDD:SufC, ABC-type transport FT system involved in Fe-S cluster assembly, ATPase component FT [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:SunT, ABC-type FT bacteriocin/lantibiotic exporters, contain an N-terminal FT double-glycine peptidase domain [Defense mechanisms]" FT /inference="protein motif:CDD:TagH, ABC-type FT polysaccharide/polyol phosphate transport system, ATPase FT component [Carbohydrate transport and metabolism / Cell FT envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:TauB, ABC-type FT nitrate/sulfonate/bicarbonate transport system, ATPase FT component [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:TauB, ABC-type taurine FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ThiQ, ABC-type thiamine FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:Ttg2A, ABC-type transport FT system involved in resistance to organic solvents, ATPase FT component [Secondary metabolites biosynthesis, transport, FT and catabolism]" FT /inference="protein motif:CDD:Uup, ATPase components of ABC FT transporters with duplicated ATPase domains [General FT function prediction only]" FT /inference="protein motif:CDD:YhbG, ABC-type (unclassified) FT transport system, ATPase component [General function FT prediction only]" FT /inference="protein motif:CDD:ZnuC, ABC-type Mn/Zn FT transport systems, ATPase component [Inorganic ion FT transport and metabolism]" FT /inference="protein motif:COG:COG1131 ABC-type multidrug FT transport system, ATPase component; V Defense mechanisms" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR19222 ATP-BINDING FT CASSETTE TRANSPORTER" FT /inference="protein motif:HMMPfam:PF00005 ABC_tran FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:ProfileScan:PS50100 DA_BOX FT InterPro:IPR003439 ABC transporter related GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATPase activity (GO:0016887)" FT /inference="protein motif:ProfileScan:PS50101 ATP_GTP_A2" FT /inference="protein motif:ProfileScan:PS50893 FT ABC_TRANSPORTER_2 InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /protein_id="ACS33130.1" FT /translation="MSKSYGDTKALDNVSFKLSEGLSFILGPNGSGKTTFIKILSGITY FT PDAGEIKVLGKDYGDLTKGEISFSFEKTNLSPSIKVGEYLSAIGEWRGEDNSREVMEMF FT ELRNVESKRFSELSQGYKRRFLVASAFVGSPKVVFLDEPFSNVDIVAKKRMMEVFMELK FT RERNIVIVSHVFTNIEEIDSLVVLYNGKVLRNLHGKELQDIGGFKAVFSDGSVVVNDLD FT ELVERIRNGQRPVSIKPVTLEDWLMDFF" FT gene 599775..600782 FT /locus_tag="TGAM_0629" FT /note="tg0629" FT CDS 599775..600782 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0629" FT /product="Pyridoxine biosynthesis protein" FT /db_xref="GOA:C5A4G9" FT /db_xref="InterPro:IPR001852" FT /db_xref="InterPro:IPR008867" FT /db_xref="InterPro:IPR011060" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/Swiss-Prot:C5A4G9" FT /inference="protein motif:BlastProDom:PD004958 FT Q9V0J7_PYRAB_Q9V0J7; InterPro:IPR001852 Vitamin B6 FT biosynthesis protein GO:Molecular Function:molecular FT function unknown (GO:0005554)" FT /inference="protein motif:CDD:SNZ1, Pyridoxine biosynthesis FT enzyme [Coenzyme metabolism]" FT /inference="protein motif:CDD:SOR_SNZ, SOR/SNZ family" FT /inference="protein motif:COG:COG0214 Pyridoxine FT biosynthesis enzyme; H Coenzyme transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.20.90 no FT description" FT /inference="protein motif:HMMPfam:PF01680 SOR_SNZ FT InterPro:IPR001852 Vitamin B6 biosynthesis protein FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:HMMTigr:TIGR00343 FT TIGR00343:pyridoxine biosynthesis protein FT InterPro:IPR001852 Vitamin B6 biosynthesis protein FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:ProfileScan:PS50264 FMN_ENZYMES FT InterPro:IPR003009 FMN/related compound-binding core" FT /inference="protein motif:ProfileScan:PS51129 PDXS_SNZ_2 FT InterPro:IPR001852 Vitamin B6 biosynthesis protein FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:ScanRegExp:PS01235 PDXS_SNZ_1 FT InterPro:IPR001852 Vitamin B6 biosynthesis protein FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:superfamily:SSF51391 Thiamin FT phosphate synthase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33131.1" FT /translation="MGKLDIIEKKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGA FT VAVMALHRVPADIRKAGGVARMAPIEKIQEIMDAVTIPVMAKVRIGHVAEARILEALGV FT DMIDESEVLTPSDPYFHIDKREFKIPFVCGNRNLGEAVRRIWEGAAMMRTKGEAGTGNI FT IEAVRHVRLLKDNIALLQRMTDEQIYGVAEKFAEPYLRLAFEVREISGLPKQVLENEPV FT YGHYTYREIVEGLYKILLEIKKLGRLPVVNFAAGGVATPADAALMMQMGMDGVFVGSGI FT FKSSNPPKMARAIVEAVNHWDEPDVLVEISKEIGEPMRGQDIEELEVRLEERGV" FT gene 600813..601406 FT /gene="pdxT" FT /locus_tag="TGAM_0630" FT /note="tg0630" FT CDS 600813..601406 FT /codon_start=1 FT /transl_table=11 FT /gene="pdxT" FT /locus_tag="TGAM_0630" FT /product="Glutamine amidotransferase subunit pdxT (pdxT)" FT /EC_number="2.6.-.-" FT /db_xref="GOA:C5A4H0" FT /db_xref="InterPro:IPR002161" FT /db_xref="InterPro:IPR021196" FT /db_xref="UniProtKB/Swiss-Prot:C5A4H0" FT /inference="protein motif:CDD:GATase1_PB, Glutamine FT Amidotransferase (GATase_I) involved in pyridoxine FT biosynthesis" FT /inference="protein motif:CDD:PDX2, Predicted glutamine FT amidotransferase involved in pyridoxine biosynthesis FT [Coenzyme metabolism]" FT /inference="protein motif:CDD:SNO, SNO glutamine FT amidotransferase family" FT /inference="protein motif:COG:COG0311 Predicted glutamine FT amidotransferase involved in pyridoxine biosynthesis; H FT Coenzyme transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.880 no FT description" FT /inference="protein motif:HMMPfam:PF01174 SNO FT InterPro:IPR002161 SNO glutamine amidotransferase" FT /inference="protein motif:ProfileScan:PS51130 PDXT_SNO_2 FT InterPro:IPR002161 SNO glutamine amidotransferase" FT /inference="protein motif:superfamily:SSF52317 Class I FT glutamine amidotransferase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33132.1" FT /translation="MVKVGVIGLQGDVSEHIEAAQRALENLGVSGEVIWLKKPEQLEGI FT SAIIIPGGESTTISRLMQKNGLLEPVRKLGEEGLPIMGTCAGLIMLSKEVIGATPEQRF FT LELLDVKVNRNAYGRQVDSFEAPVKLAFSDEPFPGVFIRAPRIVELLSDKVKPIAWLGD FT RVVGVEQDNLIGLEFHPELTEDTRVHEYFLRKAL" FT gene 601482..603470 FT /gene="fdhA" FT /locus_tag="TGAM_0631" FT /note="tg0631" FT CDS 601482..603470 FT /codon_start=1 FT /transl_table=11 FT /gene="fdhA" FT /locus_tag="TGAM_0631" FT /product="Formate dehydrogenase alpha subunit (fdhA)" FT /EC_number="1.2.1.2" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4H1" FT /db_xref="InterPro:IPR006478" FT /db_xref="InterPro:IPR006656" FT /db_xref="InterPro:IPR006657" FT /db_xref="InterPro:IPR006963" FT /db_xref="InterPro:IPR009010" FT /db_xref="UniProtKB/TrEMBL:C5A4H1" FT /inference="protein motif:COG:COG0243 Anaerobic FT dehydrogenases, typically selenocysteine-containing; C FT Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.2.40.40.20 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.228.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.90.55.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11615 FT NADH-UBIQUINONE OXIDOREDUCTASE FE-S PROTEIN 1" FT /inference="protein motif:HMMPanther:PTHR11615:SF12 FORMATE FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00384 Molybdopterin FT InterPro:IPR006656 Molybdopterin oxidoreductase FT GO:Molecular Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:HMMPfam:PF01568 Molydop_binding FT InterPro:IPR006657 Molydopterin dinucleotide-binding region FT GO:Molecular Function:oxidoreductase activity (GO:0016491), FT Molecular Function:molybdenum ion binding (GO:0030151)" FT /inference="protein motif:HMMPfam:PF04879 Molybdop_Fe4S4 FT InterPro:IPR006963 Molybdopterin oxidoreductase Fe4S4 FT region GO:Molecular Function:oxidoreductase activity FT (GO:0016491)" FT /inference="protein motif:HMMTigr:TIGR01591 FT Fdh-alpha:formate dehydrogenase, alpha sub FT InterPro:IPR006478 Formate dehydrogenase, alpha subunit FT GO:Molecular Function:formate dehydrogenase activity FT (GO:0008863), Cellular Component:formate dehydrogenase FT complex (GO:0009326), Biological Process:formate metabolism FT (GO:0015942)" FT /inference="protein motif:superfamily:SSF50692 ADC-like FT InterPro:IPR009010 Aspartate decarboxylase-like fold" FT /inference="protein motif:superfamily:SSF53706 Formate FT dehydrogenase/DMSO reductase, domains 1-3" FT /protein_id="ACS33133.1" FT /translation="MKTVVCPFCGFGCRLLVDEKSMRAKPYPGQPNRGKLCPKGLYSLE FT FVRSQGRLKRPLKRVGSAMVPISWGVAVEEIANKLLEIRELYGPDAVAFLSSSKISNEE FT NYLLQKIARLFGTNNIDNCARLCHEASVHALKLAVGTGAQTNPYEDLENFNAVLIWGYN FT PAETHPVVMNYVLRAKRRGAKVIVVDVRETRTMAFADYKLIIKPGTDIVLANAMANVIT FT GEELYDEEFVRSRTSGFSEVRMAVMKYTPEYAETVTGIPAETIREVARAFALAGSGAIM FT WGMGLTQHVSGVENVLAVINLALLLGYIGEKGGLYPMRGQNNVQGAAYMGALSEFLPGY FT VPLTDERFRKRVASLWGVDDLPTERGLYLTELWDAIERSDLKALYIVGENPAVSEADFT FT RVRRALRKLDLLVVQDVFMTRTARYAHYVLPASAFCEKEGSYMNSERRIQWSHKVCEPY FT ADSKPDWEILAMLGRALGLPGFNYTRVEEITVEYFRLFPELEERSVDELKNGEGIFLPR FT KRLHTWEFATPDGKARFMAVERISPWEEPSEEFPLILTTVRLINHYNTGEMTLRSPSLV FT KLMGEPKVMINEKDAKRLGITDGDWVDIETRRGRIRMRAKVGGVPEGLVAIPFHFKANR FT ITSPALNKAGTPEFKFSACRVKKMKAP" FT gene 603592..603921 FT /locus_tag="TGAM_0632" FT /note="tg0632" FT CDS 603592..603921 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0632" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4H2" FT /protein_id="ACS33134.1" FT /translation="MVNLDELKVNAQEYLEDADYLYNKGHYNSALNLYFKALVAICDYI FT ILRDTGKLPRNHTERFRILEEKYPDIYDIVDFHFNNYRKAYLMRATKEWVEVLKNDVHN FT LYSQL" FT gene 603890..604534 FT /locus_tag="TGAM_0633" FT /note="tg0633" FT CDS 603890..604534 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0633" FT /product="Nucleotidyltransferase, putative" FT /note="Contains a DNA polymerase, beta-like region." FT /db_xref="GOA:C5A4H3" FT /db_xref="InterPro:IPR002934" FT /db_xref="UniProtKB/TrEMBL:C5A4H3" FT /inference="protein motif:Gene3D:G3D.3.30.460.10 no FT description" FT /inference="protein motif:HMMPfam:PF01909 NTP_transf_2 FT InterPro:IPR002934 DNA polymerase, beta-like region FT GO:Molecular Function:nucleotidyltransferase activity FT (GO:0016779)" FT /inference="protein motif:superfamily:SSF81301 FT Nucleotidyltransferase" FT /protein_id="ACS33135.1" FT /translation="MTSTTSTLSSEPLQFFTLQGTLHETVKNFVENHSEVFDVVLYGST FT VLGKEKPNDLDLMILTRTKLPALELRNLILELKRELSKILTNAKLDIRAMSLEELFDPN FT NLASLGVIIEGFSLTKNKSMAELMNGKAYALFRFTLEGLPRKDRVRFQYALKGRDMKSG FT LLKELNGEQWGAWVVVVPIEHTYRFRDFLELWGVKYEAFTILKGADLFYKF" FT gene complement(604541..605899) FT /gene="purF" FT /locus_tag="TGAM_0634" FT /note="tg0634" FT CDS complement(604541..605899) FT /codon_start=1 FT /transl_table=11 FT /gene="purF" FT /locus_tag="TGAM_0634" FT /product="Amidophosphoribosyltransferase (purF)" FT /EC_number="2.4.2.14" FT /db_xref="GOA:C5A4H4" FT /db_xref="InterPro:IPR000583" FT /db_xref="InterPro:IPR000836" FT /db_xref="InterPro:IPR005854" FT /db_xref="InterPro:IPR017932" FT /db_xref="UniProtKB/TrEMBL:C5A4H4" FT /inference="protein motif:CDD:AsnB, Asparagine synthase FT (glutamine-hydrolyzing) [Amino acid transport and FT metabolism]" FT /inference="protein motif:CDD:AsnB, Glutamine FT amidotransferases class-II (GATase) asparagine synthase_B FT type" FT /inference="protein motif:CDD:GATase_2, Glutamine FT amidotransferases class-II" FT /inference="protein motif:CDD:GFAT, Glutamine FT amidotransferases class-II (Gn-AT)_GFAT-type" FT /inference="protein motif:CDD:GlmS, Glucosamine 6-phosphate FT synthetase, contains amidotransferase and phosphosugar FT isomerase domains [Cell envelope biogenesis, outer FT membrane]" FT /inference="protein motif:CDD:GlxB, Glutamine FT amidotransferases class-II (Gn-AT)_GlxB-type" FT /inference="protein motif:CDD:Gn_AT_II, Glutamine FT amidotransferases class-II (GATase)" FT /inference="protein motif:CDD:GPATase_N, Glutamine FT amidotransferases class-II (GN-AT)_GPAT- type" FT /inference="protein motif:CDD:PurF, Glutamine FT phosphoribosylpyrophosphate amidotransferase [Nucleotide FT transport and metabolism]" FT /inference="protein motif:CDD:YafJ, Glutamine FT amidotransferases class-II (Gn-AT)_YafJ-type" FT /inference="protein motif:COG:COG0034 Glutamine FT phosphoribosylpyrophosphate amidotransferase; F Nucleotide FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.60.20.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11907 FT AMIDOPHOSPHORIBOSYLTRANSFERASE InterPro:IPR005854 FT Amidophosphoribosyl transferase GO:Molecular FT Function:amidophosphoribosyltransferase activity FT (GO:0004044), Biological Process:purine base biosynthesis FT (GO:0009113)" FT /inference="protein motif:HMMPanther:PTHR11907:SF2 FT AMIDOPHOSPHORIBOSYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00156 Pribosyltran FT InterPro:IPR000836 Phosphoribosyltransferase GO:Biological FT Process:nucleoside metabolism (GO:0009116)" FT /inference="protein motif:HMMPfam:PF00310 GATase_2 FT InterPro:IPR000583 Glutamine amidotransferase, class-II FT GO:Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:HMMTigr:TIGR01134 FT purF:amidophosphoribosyltransferase InterPro:IPR005854 FT Amidophosphoribosyl transferase GO:Molecular FT Function:amidophosphoribosyltransferase activity FT (GO:0004044), Biological Process:purine base biosynthesis FT (GO:0009113)" FT /inference="protein motif:ScanRegExp:PS00103 FT PUR_PYR_PR_TRANSFER InterPro:IPR002375 Purine/pyrimidine FT phosphoribosyl transferase GO:Molecular FT Function:transferase activity (GO:0016740)" FT /inference="protein motif:ScanRegExp:PS00443 GATASE_TYPE_II FT InterPro:IPR000583 Glutamine amidotransferase, class-II FT GO:Biological Process:metabolism (GO:0008152)" FT /inference="protein motif:superfamily:SSF53271 PRTase-like" FT /inference="protein motif:superfamily:SSF56235 N-terminal FT nucleophile aminohydrolases (Ntn hydrolases)" FT /protein_id="ACS33136.1" FT /translation="MVAMREKCGIFATLSENSAKKAYYALLALQHRGQESAGISVWRHR FT IRTVSGPGLVQDVFKGPVLAKIKSNLAIAHVRYSTSGSLNETQPLETECCGMRIAVAHN FT GTLTNFRPLRERYEKLGVRFRHSVDSELLGISFLWHLHETGDEFEAMRAVFGEVKGAYS FT VALLFDGKILVARDPVGFRPLSYGTGDGHYFASEDSALRLFVNESENGEIRDVEPGEVF FT LLSENGVESKVLARESHHHCVFEYIYFARPDSVLDRTNVYSARVRMGVELARESPAEAD FT VVIAVPDSGRAAALGFSRESGIPYAEGLIKNRYIGRTFITPGQFNRELKVKLKLSPVRE FT VIAGKRVVLVDDSIVRGTTMKRIVAMLRKAGAREVHVRIASPPIRYPCYMGIDIPTRHE FT LIAAFGGVEKVREAIGADSLAYLSVEGLKRAVGREDLCLACLTGEYPEWAFRF" FT gene 606045..606752 FT /gene="purC-1" FT /locus_tag="TGAM_0635" FT /note="tg0635" FT CDS 606045..606752 FT /codon_start=1 FT /transl_table=11 FT /gene="purC-1" FT /locus_tag="TGAM_0635" FT /product="Phosphoribosylaminoimidazole-succinocarboxamide FT synthase (purC)" FT /EC_number="6.3.2.6" FT /db_xref="GOA:C5A4H5" FT /db_xref="InterPro:IPR001636" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR018236" FT /db_xref="UniProtKB/TrEMBL:C5A4H5" FT /inference="protein motif:BlastProDom:PD003043 FT PUR7_PYRFU_Q8U4D5; InterPro:IPR001636 SAICAR synthetase FT GO:Molecular FT Function:phosphoribosylaminoimidazolesuccinocarboxamide FT synthase activity (GO:0004639), Biological Process:purine FT nucleotide biosynthesis (GO:0006164)" FT /inference="protein motif:CDD:SAICAR_synt, SAICAR FT synthetase" FT /inference="protein motif:CDD:SAICAR_synt, SAICAR FT synthetase catalyzes the seventh step of the de novo FT biosynthesis of purine nucleotides, the conversion of FT carboximideaminoimidazole ribonucleotide (CAIR) into FT succinoaminoimidazolecarboximide ribonucleotide (SAICAR)" FT /inference="protein motif:CDD:SAICAR_synt_Ade5, Eukaryotic FT group of SAICAR synthetases represented by the Drosophila FT melanogaster, N-terminal, SAICAR synthetase domain of Ade5" FT /inference="protein motif:CDD:SAICAR_synt_Sc, Eukaryotic, FT prokaryotic and archaeal group of SAICAR synthetases FT represented by the Saccharomyces cerevisiae (Sc) SAICAR FT synthetase" FT /inference="protein motif:CDD:SAICAR_synt_Tm, Prokaryotic FT and archaeal group of SAICAR synthetases represented by the FT Thermotoga maritima (Tm) SAICAR synthetase and E" FT /inference="protein motif:COG:COG0152 FT Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) FT synthase; F Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.30.470.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR11609 FT PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE FT InterPro:IPR001636 SAICAR synthetase GO:Molecular FT Function:phosphoribosylaminoimidazolesuccinocarboxamide FT synthase activity (GO:0004639), Biological Process:purine FT nucleotide biosynthesis (GO:0006164)" FT /inference="protein motif:HMMPanther:PTHR11609:SF1 FT PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE" FT /inference="protein motif:HMMPfam:PF01259 SAICAR_synt FT InterPro:IPR001636 SAICAR synthetase GO:Molecular FT Function:phosphoribosylaminoimidazolesuccinocarboxamide FT synthase activity (GO:0004639), Biological Process:purine FT nucleotide biosynthesis (GO:0006164)" FT /inference="protein motif:HMMTigr:TIGR00081 FT purC:phosphoribosylaminoimidazole-succinoca FT InterPro:IPR001636 SAICAR synthetase GO:Molecular FT Function:phosphoribosylaminoimidazolesuccinocarboxamide FT synthase activity (GO:0004639), Biological Process:purine FT nucleotide biosynthesis (GO:0006164)" FT /inference="protein motif:ScanRegExp:PS01057 FT SAICAR_SYNTHETASE_1 InterPro:IPR001636 SAICAR synthetase FT GO:Molecular FT Function:phosphoribosylaminoimidazolesuccinocarboxamide FT synthase activity (GO:0004639), Biological Process:purine FT nucleotide biosynthesis (GO:0006164)" FT /inference="protein motif:ScanRegExp:PS01058 FT SAICAR_SYNTHETASE_2 InterPro:IPR001636 SAICAR synthetase FT GO:Molecular FT Function:phosphoribosylaminoimidazolesuccinocarboxamide FT synthase activity (GO:0004639), Biological Process:purine FT nucleotide biosynthesis (GO:0006164)" FT /inference="protein motif:superfamily:SSF56104 SAICAR FT synthase-like" FT /protein_id="ACS33137.1" FT /translation="MEVYEGKAKRVIPLDDGKVILEFKDDATAFDGKKKARFKGKGWLN FT AQISAVLFKVLEENGIKTHFIGIAGDNRLIVERLKMYPLEVVVRNVVAGSLKKRLPLEE FT GTELPEPIVELYYKDDGLGDPMINHYHAKVLGVSEEEVREMERIALKVNEVLRKYFTER FT GIILVDFKLEFGKNERGEIVLGDEISPDTCRFWDAETKESLDKDVFRFDKGDLISAYEK FT LYERLTGESPTHR" FT gene complement(606724..606888) FT /locus_tag="TGAM_0636" FT /note="tg0636" FT CDS complement(606724..606888) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0636" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4H6" FT /protein_id="ACS33138.1" FT /translation="MELTVRRKAFLEELPGVVEEAVKTYGIWLRRIEIEEDEKGCYTVL FT IIYESEIHR" FT gene complement(606921..607925) FT /gene="purM" FT /locus_tag="TGAM_0637" FT /note="tg0637" FT CDS complement(606921..607925) FT /codon_start=1 FT /transl_table=11 FT /gene="purM" FT /locus_tag="TGAM_0637" FT /product="Phosphoribosylformylglycinamidine cyclo-ligase FT (purM)" FT /EC_number="6.3.3.1" FT /db_xref="GOA:C5A4H7" FT /db_xref="InterPro:IPR000728" FT /db_xref="InterPro:IPR004733" FT /db_xref="InterPro:IPR010918" FT /db_xref="InterPro:IPR016188" FT /db_xref="UniProtKB/Swiss-Prot:C5A4H7" FT /inference="protein motif:CDD:AIRS, AIR synthase related FT protein, N-terminal domain" FT /inference="protein motif:CDD:AIRS_C, AIR synthase related FT protein, C-terminal domain" FT /inference="protein motif:CDD:COG2144, Selenophosphate FT synthetase-related proteins [General function prediction FT only]" FT /inference="protein motif:CDD:HypE, Hydrogenase maturation FT factor [Posttranslational modification, protein turnover, FT chaperones]" FT /inference="protein motif:CDD:PurM, FT Phosphoribosylaminoimidazole (AIR) synthetase [Nucleotide FT transport and metabolism]" FT /inference="protein motif:CDD:PurM_N, PurM (Aminoimidazole FT Ribonucleotide [AIR] synthetase), one of eleven enzymes FT required for purine biosynthesis, catalyzes the conversion FT of formylglycinamide ribonucleotide (FGAM) and ATP to AIR, FT ADP, and Pi, the fifth step in de novo purine biosynthesis" FT /inference="protein motif:CDD:PurM_N_like, AIR synthase FT related protein, N-terminal domain" FT /inference="protein motif:CDD:ThiL, Thiamine monophosphate FT kinase [Coenzyme metabolism]" FT /inference="protein motif:COG:COG0150 FT Phosphoribosylaminoimidazole (AIR) synthetase; F Nucleotide FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.30.70.460 no FT description" FT /inference="protein motif:Gene3D:G3D.3.90.650.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10520 FT PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10520:SF5 FT TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN-RELATED" FT /inference="protein motif:HMMPfam:PF00586 AIRS FT InterPro:IPR000728 AIR synthase related protein FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMPfam:PF02769 AIRS_C FT InterPro:IPR010918 AIR synthase related protein, FT C-terminal" FT /inference="protein motif:HMMTigr:TIGR00878 FT purM:phosphoribosylformylglycinamidine cycl FT InterPro:IPR004733 Phosphoribosylformylglycinamidine FT cyclo-ligase GO:Molecular FT Function:phosphoribosylformylglycinamidine cyclo-ligase FT activity (GO:0004641), Cellular Component:cytoplasm FT (GO:0005737), Biological Process:'de novo' IMP biosynthesis FT (GO:0006189)" FT /inference="protein motif:superfamily:SSF55326 FT Aminoimidazole ribonucleotide synthetase (PurM) N-terminal FT domain" FT /inference="protein motif:superfamily:SSF56042 FT Aminoimidazole ribonucleotide synthetase (PurM) C-terminal FT domain" FT /protein_id="ACS33139.1" FT /translation="MLTYAQAGVDDEKTVRALKNIIGLARETFKFRRGKPGEPAENLGH FT YSALLDFGNFYLAMTTDGVGTKVLVAEAVGKFNTIGIDMIAMNVNDLLCVGAEPIALVD FT YLAVREPDEKIFAEIAKGLYAGAEKAGIAIVGGETAVMPDLINGFDLAGTAIGIVEKGK FT VITGEEMRPDDAVIGISSSGIHSNGLTLARKLLIPKYGLDYEYEGRKLWEWLLEPTRIY FT VRAVLELLERVEVHGLAHITGGGLINLKRLTNYGFSLEMPPIEGIFKLIHENGVPLEEM FT FRVFNMGVGFVAIVPPEEKEEALGILNKYYESFELGRVTKEPGIRVENYGIKL" FT gene 608052..609344 FT /gene="purT" FT /locus_tag="TGAM_0638" FT /note="tg0638" FT CDS 608052..609344 FT /codon_start=1 FT /transl_table=11 FT /gene="purT" FT /locus_tag="TGAM_0638" FT /product="Phosphoribosylglycinamide formyltransferase 2 FT (purT)" FT /EC_number="2.1.2.-" FT /db_xref="GOA:C5A4H8" FT /db_xref="InterPro:IPR003135" FT /db_xref="InterPro:IPR005862" FT /db_xref="InterPro:IPR011054" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="UniProtKB/TrEMBL:C5A4H8" FT /inference="protein motif:CDD:AccC, Biotin carboxylase FT [Lipid metabolism]" FT /inference="protein motif:CDD:ATP-grasp, ATP-grasp domain" FT /inference="protein motif:CDD:CarB, Carbamoylphosphate FT synthase large subunit (split gene in MJ) [Amino acid FT transport and metabolism / Nucleotide transport and FT metabolism]" FT /inference="protein motif:CDD:Dala_Dala_ligas, D-ala D-ala FT ligase" FT /inference="protein motif:CDD:PurK, FT Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) FT [Nucleotide transport and metabolism]" FT /inference="protein motif:CDD:PurT, Formate-dependent FT phosphoribosylglycinamide formyltransferase (GAR FT transformylase) [Nucleotide transport and metabolism]" FT /inference="protein motif:COG:COG0027 Formate-dependent FT phosphoribosylglycinamide formyltransferase (GAR FT transformylase); F Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.30.470.20 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR18866 FT ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR18866:SF31 BIOTIN FT CARBOXYLASE-RELATED" FT /inference="protein motif:HMMPfam:PF02222 ATP-grasp FT InterPro:IPR003135 ATP-dependent carboxylate-amine FT ligase-like, ATP-grasp" FT /inference="protein motif:HMMTigr:TIGR01142 FT purT:phosphoribosylglycinamide formyltransf FT InterPro:IPR005862 Phosphoribosylglycinamide FT formyltransferase 2 GO:Biological Process:purine base FT biosynthesis (GO:0009113), Molecular FT Function:hydroxymethyl-, formyl- and related transferase FT activity (GO:0016742)" FT /inference="protein motif:ProfileScan:PS50205 NAD_BINDING FT InterPro:IPR000205 NAD-binding site" FT /inference="protein motif:ProfileScan:PS50975 ATP_GRASP FT InterPro:IPR011761 ATP-grasp fold GO:Molecular FT Function:catalytic activity (GO:0003824)" FT /inference="protein motif:superfamily:SSF52440 PreATP-grasp FT domain" FT /inference="protein motif:superfamily:SSF56059 Glutathione FT synthetase ATP-binding domain-like" FT /protein_id="ACS33140.1" FT /translation="MSKPRDELGTAMTDSAQKILLLGSGELGKEIAIEAQRLGVEVVAV FT DRYANAPAMQVAHRSYVGDMRNADFLFSVVEREKPDAIIPEIEAINLDALFELEKDGYF FT VVPNARATWIAMHRERTRETLAKEAKVPTSRYAYATTLDELYEACERIGYPCHTKAIMS FT SSGKGSYFVEGPEDIPKAWEVAKKKARGSADKIIVEEHIDFDVEITELAVRHYDENGEV FT VTTFPKPVGHYQIDGDYHASWQPAEISEKAEREVYRIAKRITDVLGGLGLFGVEMFVKG FT DKVWANEVSPRPHDTGMVTLASHPTGFSEFGLHLRAVLGLPIPGEWVNGYRLFPLLTPA FT ATHVIKANVSGYSPRFRGLSKALGVPNATVRLFGKPEAYPGRRLGVAIAWDRNVEEAKR FT KAEMVAHMIELRTRSSDWHGQDYEKRKHLMG" FT gene complement(609347..609517) FT /gene="secG" FT /locus_tag="TGAM_0639" FT /note="tg0639" FT CDS complement(609347..609517) FT /codon_start=1 FT /transl_table=11 FT /gene="secG" FT /locus_tag="TGAM_0639" FT /product="Preprotein translocase SEC61 complex beta subunit FT (secG)" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A4H9" FT /db_xref="InterPro:IPR005609" FT /db_xref="InterPro:IPR023531" FT /db_xref="UniProtKB/Swiss-Prot:C5A4H9" FT /inference="protein motif:COG:COG4023 Preprotein FT translocase subunit Sec61beta; U Intracellular trafficking, FT secretion, and vesicular transport" FT /inference="protein motif:HMMPfam:PF03911 Sec61_beta FT InterPro:IPR005609 Sec61beta" FT /protein_id="ACS33141.1" FT /translation="MAKDKTTLPPTGAGLMRFFDEDTRAIKVSPKGVIAIVLVLIAFEV FT FLHLFGPSIFG" FT gene 609636..610304 FT /gene="tip" FT /locus_tag="TGAM_0640" FT /note="tg0640" FT CDS 609636..610304 FT /codon_start=1 FT /transl_table=11 FT /gene="tip" FT /locus_tag="TGAM_0640" FT /product="TBP-interacting protein (tip)" FT /db_xref="GOA:C5A4I0" FT /db_xref="InterPro:IPR015880" FT /db_xref="UniProtKB/TrEMBL:C5A4I0" FT /inference="protein motif:HMMPfam:PF00096 zf-C2H2 FT InterPro:IPR007087 Zinc finger, C2H2-type GO:Molecular FT Function:nucleic acid binding (GO:0003676), Cellular FT Component:nucleus (GO:0005634), Molecular Function:zinc ion FT binding (GO:0008270)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33142.1" FT /translation="MDYGSLSPRMKRVYTQVRYLDDYHWNIRDDAIEGIHKKSGIRVLI FT LAADNREHALKIADGLNERGIVIIAVPEKGVFAVHNGAFVMTYKYARATLSDIHDHIVW FT SGFKVVENGNSLKQEDVYEYLGGRLIEHIKENAVIGQDYVFWQFYRCEKCGKYVDIDNL FT ESHLRGHGIKLHEKSEERYEIFEINFRDGKVYDKFGEEVPLSKFSDEAKDFLRESMEGK FT " FT gene complement(610305..611444) FT /locus_tag="TGAM_0641" FT /note="tg0641" FT CDS complement(610305..611444) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0641" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF835 family; 7 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR008553" FT /db_xref="UniProtKB/TrEMBL:C5A4I1" FT /inference="protein motif:CDD:DUF835, Protein of unknown FT function (DUF835)" FT /inference="protein motif:HMMPfam:PF05763 DUF835 FT InterPro:IPR008553 Protein of unknown function DUF835" FT /inference="protein motif:superfamily:SSF51366 FT Ribulose-phoshate binding barrel InterPro:IPR011060 FT Ribulose-phosphate binding barrel" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33143.1" FT /translation="MSEFIPLLNFLSRWVLFGTVAWKAYKTRDKGWALLAAALFIGALD FT IETYILTPLGIEIPQPAYDVASKVPDFYIALLTIWGTLHLRYEKTNFNHVVYLSLLLIA FT SYVWLFLLAINFFGSNFAVKASFPSLLLGASLIYVSYVLWNHVISRRLLDRLFPIGLCT FT VGLLNLTYPIGRPVEWYSTIAFFLAAVGRLLAAIGAFTFVFYPLSEPIKKTKAPEIVQG FT AYLARDRKEVQKILPNFFENDMIAVTRLSPVEIAGKFTPASMVFWITKAKEGQVSDNPK FT VIAISPAKLGILQDLIIREIERGYRIVYVDAFEYLVVEVGFQVAFKFLLSVRDFVLSNG FT GTLVLVANPETLREQEWKLVLREFTPLKSLKKAEKNPKE" FT gene complement(611444..612706) FT /locus_tag="TGAM_0642" FT /note="tg0642" FT CDS complement(611444..612706) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0642" FT /product="Sugar-phosphate nucleotydyltransferase" FT /db_xref="GOA:C5A4I2" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR023915" FT /db_xref="UniProtKB/TrEMBL:C5A4I2" FT /inference="protein motif:CDD:COG1213, Predicted sugar FT nucleotidyltransferases [Cell envelope biogenesis, outer FT membrane]" FT /inference="protein motif:CDD:GalU, UDP-glucose FT pyrophosphorylase [Cell envelope biogenesis, outer FT membrane]" FT /inference="protein motif:CDD:GCD1, FT Nucleoside-diphosphate-sugar pyrophosphorylase involved in FT lipopolysaccharide biosynthesis/translation initiation FT factor 2B, gamma/epsilon subunits FT (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, FT outer membrane / Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:GlgC, ADP-glucose FT pyrophosphorylase [Carbohydrate transport and metabolism]" FT /inference="protein motif:CDD:GlmU, FT N-acetylglucosamine-1-phosphate uridyltransferase (contains FT nucleotidyltransferase and I-patch acetyltransferase FT domains) [Cell envelope biogenesis, outer membrane]" FT /inference="protein motif:CDD:LpxD, FT UDP-3-O-[3-hydroxymyristoyl]" FT /inference="protein motif:CDD:NTP_transferase, Nucleotidyl FT transferase" FT /inference="protein motif:CDD:RfbA, dTDP-glucose FT pyrophosphorylase [Cell envelope biogenesis, outer FT membrane]" FT /inference="protein motif:COG:COG1208 FT Nucleoside-diphosphate-sugar pyrophosphorylase involved in FT lipopolysaccharide biosynthesis/translation initiation FT factor 2B, gamma/epsilon subunits FT (eIF-2Bgamma/eIF-2Bepsilon); M Cell wall/membrane/envelope FT biogenesis" FT /inference="protein motif:Gene3D:G3D.3.90.550.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR19136 FT SUGAR-PHOSPHATE NUCLEOTIDYL TRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR19136:SF24 FT GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF00132 Hexapep FT InterPro:IPR001451 Bacterial transferase hexapeptide FT repeat" FT /inference="protein motif:HMMPfam:PF00483 NTP_transferase FT InterPro:IPR005835 Nucleotidyl transferase GO:Biological FT Process:biosynthesis (GO:0009058), Molecular FT Function:nucleotidyltransferase activity (GO:0016779)" FT /inference="protein motif:superfamily:SSF51161 Trimeric FT LpxA-like enzymes InterPro:IPR011004 Trimeric LpxA-like" FT /inference="protein motif:superfamily:SSF53448 FT Nucleotide-diphospho-sugar transferases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33144.1" FT /translation="MKAVVLAAGKGERLKPLTDDRPKVILKVANRPIIEYVMENLYPFV FT DEFIIVVRYEKEKIIETLGDEFGGKPVTYVEQRPGEGTAKAVESAREHVGDEEFIVANG FT DIYFEVEAIKELVSAFRREKADAALVLKHFEDLSHFGKVEVKEGRVVGILEKPGKVPGY FT ANLGIYLFRPDVFEFIGETPLSERGEYEITDTINLMIKAGKKVAYAVYSDYWNDIGRPW FT NLLELNEYLLKTKLRHEIRGTVEEGATIIPPVEIGEGTVVRSGAYIIGPVKIGRNSRVG FT PNCFIRPYTSIGDNCHIGNAVEVKNSIIMDNSNAPHLNYVGDSIIGENVNLGAGTITAN FT LRHDRTNIKVEIKGKLEDSGRHKLGAIIGHGVKTGINVSIYPGRKIGSHSLIGPGVVVD FT RNVPPGTMVLLRQEKVEKRVR" FT gene complement(612703..613437) FT /locus_tag="TGAM_0643" FT /note="tg0643" FT CDS complement(612703..613437) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0643" FT /product="Undecaprenol kinase related protein" FT /note="7 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4I3" FT /db_xref="InterPro:IPR003824" FT /db_xref="UniProtKB/TrEMBL:C5A4I3" FT /protein_id="ACS33145.1" FT /translation="MLGFIIALLTGLLTALIVLFPASAVVFSMDVNLLVPAYAGALVAL FT LFYFRELLSKEPIMALKGFSPAQLRYAILATTLTLVLGFLPRLSGGKVELAIAGIIVAL FT LPAIAYGFKPLEGLRKTFEEEPTPVDAVSVGIAHALAILFSLPRGGMSALALALSGYDA FT KRILRFSLQVAPAYLVVEIIRAGQCQPRPKWLGPLTFASSFFVTFLLVWLLFKLTERLE FT SRTFLAFYGVVGVILYLMGVLI" FT gene 613553..613762 FT /locus_tag="TGAM_0644" FT /note="tg0644" FT CDS 613553..613762 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0644" FT /product="Hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4I4" FT /protein_id="ACS33146.1" FT /translation="MGLGVIVDKLNRYEGLFEKLGLLLVAVFFLLVIAGFTDLSHVGKL FT MSLVLLFLVAMSSLVGVVLYRSLD" FT gene 613820..614893 FT /locus_tag="TGAM_0645" FT /note="tg0645" FT CDS 613820..614893 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0645" FT /product="GTPase, NOG1/MMR-HSR1 family" FT /note="Belongs to G-protein superfamily" FT /db_xref="GOA:C5A4I5" FT /db_xref="InterPro:IPR005225" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR010674" FT /db_xref="UniProtKB/TrEMBL:C5A4I5" FT /inference="protein motif:CDD:COG1084, Predicted GTPase FT [General function prediction only]" FT /inference="protein motif:CDD:COG1160, Predicted GTPases FT [General function prediction only]" FT /inference="protein motif:CDD:DRG, Predicted GTPase FT [General function prediction only]" FT /inference="protein motif:CDD:DRG, The developmentally FT regulated GTP-binding protein (DRG) subfamily is an FT uncharacterized member of the Obg family, an evolutionary FT branch of GTPase superfamily proteins" FT /inference="protein motif:CDD:EngA1, EngA1 subfamily" FT /inference="protein motif:CDD:EngA2, EngA2 subfamily" FT /inference="protein motif:CDD:Era, Era subfamily" FT /inference="protein motif:CDD:Era, GTPase [General function FT prediction only]" FT /inference="protein motif:CDD:Era_like, Era (E" FT /inference="protein motif:CDD:FeoB, Fe2+ transport system FT protein B [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:FeoB, Ferrous iron transport FT protein B" FT /inference="protein motif:CDD:FeoB, Ferrous iron transport FT protein B (FeoB) subfamily" FT /inference="protein motif:CDD:HflX, GTPases [General FT function prediction only]" FT /inference="protein motif:CDD:HflX, HflX subfamily" FT /inference="protein motif:CDD:NOG, NOG1 is a nucleolar FT GTP-binding protein present in eukaryotes ranging from FT trypanosomes to humans" FT /inference="protein motif:CDD:NOG1, Nucleolar GTP-binding FT protein 1 (NOG1)" FT /inference="protein motif:CDD:Obg, Obg subfamily" FT /inference="protein motif:CDD:Obg, Predicted GTPase FT [General function prediction only]" FT /inference="protein motif:CDD:Obg_like, The Obg-like FT subfamily consists of five well-delimited, ancient FT subfamilies, namely Obg, DRG, YyaF/YchF, Ygr210, and NOG1" FT /inference="protein motif:CDD:Ras_like_GTPase, Ras-like FT GTPase superfamily" FT /inference="protein motif:CDD:ThdF, Predicted GTPase FT [General function prediction only]" FT /inference="protein motif:CDD:trmE, TrmE (MnmE, ThdF, MSS1) FT is a 3-domain protein found in bacteria and eukaryotes" FT /inference="protein motif:COG:COG1084 Predicted GTPase; R FT General function prediction only" FT /inference="protein motif:FPrintScan:PR00326 GTP1OBG FT InterPro:IPR006073 GTP1/OBG GO:Molecular Function:GTP FT binding (GO:0005525)" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR11702 GTP-BINDING FT PROTEIN-RELATED" FT /inference="protein motif:HMMPanther:PTHR11702:SF3 FT GTP-BINDING PROTEIN, GTP1/OBG-FAMILY" FT /inference="protein motif:HMMPfam:PF06858 NOG1 FT InterPro:IPR010674 Nucleolar GTP-binding 1 GO:Molecular FT Function:GTP binding (GO:0005525)" FT /inference="protein motif:HMMTigr:TIGR00231 small_GTP:small FT GTP-binding protein domain InterPro:IPR005225 Small FT GTP-binding protein domain GO:Molecular Function:GTP FT binding (GO:0005525)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /protein_id="ACS33147.1" FT /translation="MKNPFEKMPTVLTADELIDKAFRRAERAASAYNPPGGKVAKARQR FT EELRVRTVSNVVRDNLRKILDRTPGVSTLPKFYQELVDTLVDRDQFHRSLARVNWAIKT FT IRNLEQRYVEKIRYERDPKGIAKLRRAFYGRVADILHEIDDDLRYLNQARNVLKELPVV FT DLELPTVVIAGHPNVGKSTLLRALTNAKPEVASYPFTTKGINVGQFEEHYLRYQVIDTP FT GLLDRPLSERNEVEKQAILALKHLGDVIVYIFDPSEYCGFPIEEQMHLFEEILNEFGEF FT PFIVAINKVDIADDEKVRTVEEFVRAKGLEPVKISALTGEGLDELKKRVIAVVEPKARE FT LAKKIMERELSKFREGV" FT gene complement(615061..615453) FT /gene="rps8E" FT /locus_tag="TGAM_0646" FT /note="tg0646" FT CDS complement(615061..615453) FT /codon_start=1 FT /transl_table=11 FT /gene="rps8E" FT /locus_tag="TGAM_0646" FT /product="SSU ribosomal protein S8E (rps8E)" FT /db_xref="GOA:C5A4I6" FT /db_xref="InterPro:IPR001047" FT /db_xref="InterPro:IPR018283" FT /db_xref="InterPro:IPR020919" FT /db_xref="InterPro:IPR022309" FT /db_xref="UniProtKB/Swiss-Prot:C5A4I6" FT /inference="protein motif:BlastProDom:PD005658 FT RS8E_PYRFU_Q8U1Y5; InterPro:IPR001047 Ribosomal protein S8E FT GO:Cellular Component:intracellular (GO:0005622)" FT /inference="protein motif:CDD:Ribosomal_S8e, Ribosomal FT protein S8e" FT /inference="protein motif:CDD:RPS8A, Ribosomal protein S8E FT [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:COG:COG2007 Ribosomal protein FT S8E; J Translation, ribosomal structure and biogenesis" FT /inference="protein motif:HMMPanther:PTHR10394 40S FT RIBOSOMAL PROTEIN S8" FT /inference="protein motif:HMMPanther:PTHR10394:SF1 40S FT RIBOSOMAL PROTEIN S8" FT /inference="protein motif:HMMPfam:PF01201 Ribosomal_S8e FT InterPro:IPR001047 Ribosomal protein S8E GO:Cellular FT Component:intracellular (GO:0005622)" FT /inference="protein motif:HMMTigr:TIGR00307 S8e:ribosomal FT protein S8.e InterPro:IPR001047 Ribosomal protein S8E FT GO:Cellular Component:intracellular (GO:0005622)" FT /inference="protein motif:ScanRegExp:PS01193 RIBOSOMAL_S8E FT InterPro:IPR001047 Ribosomal protein S8E GO:Cellular FT Component:intracellular (GO:0005622)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33148.1" FT /translation="MAIWQGRSLKKPSGGRIVLARKKRKRELGREPANTRVAEEREKRK FT IIRTYGGNRKVRLVEALYANVFEGGKGRKVKILNVVENPANRQYARRNIITKGAIIETE FT IGKAVVTSRPGQDGVVNAVLLKEENA" FT gene 615626..618262 FT /locus_tag="TGAM_0647" FT /note="tg0647" FT CDS 615626..618262 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0647" FT /product="DEAD/DEAH box RNA helicase" FT /db_xref="GOA:C5A4I7" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR011545" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR014014" FT /db_xref="UniProtKB/TrEMBL:C5A4I7" FT /inference="protein motif:COG:COG1202 Superfamily II FT helicase, archaea-specific; R General function prediction FT only" FT /inference="protein motif:Gene3D:G3D.1.10.30.10 no FT description InterPro:IPR009071 High mobility group box" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR11752 HELICASE FT SKI2-RELATED" FT /inference="protein motif:HMMPanther:PTHR11752:SF9 DNA FT HELICASE-RELATED" FT /inference="protein motif:HMMPfam:PF00270 DEAD FT InterPro:IPR011545 DEAD/DEAH box helicase, N-terminal FT GO:Molecular Function:nucleic acid binding (GO:0003676), FT Molecular Function:helicase activity (GO:0004386), FT Molecular Function:ATP binding (GO:0005524)" FT /inference="protein motif:HMMPfam:PF00271 Helicase_C FT InterPro:IPR001650 Helicase, C-terminal GO:Molecular FT Function:nucleic acid binding (GO:0003676), Molecular FT Function:helicase activity (GO:0004386), Molecular FT Function:ATP binding (GO:0005524)" FT /inference="protein motif:HMMSmart:SM00487 no description FT InterPro:IPR011545 DEAD/DEAH box helicase, N-terminal FT GO:Molecular Function:nucleic acid binding (GO:0003676), FT Molecular Function:helicase activity (GO:0004386), FT Molecular Function:ATP binding (GO:0005524)" FT /inference="protein motif:HMMSmart:SM00490 no description FT InterPro:IPR001650 Helicase, C-terminal GO:Molecular FT Function:nucleic acid binding (GO:0003676), Molecular FT Function:helicase activity (GO:0004386), Molecular FT Function:ATP binding (GO:0005524)" FT /inference="protein motif:ProfileScan:PS50136 HELICASE FT InterPro:IPR001410 DEAD/DEAH box helicase GO:Molecular FT Function:ATP binding (GO:0005524), Molecular FT Function:ATP-dependent helicase activity (GO:0008026)" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /inference="protein motif:superfamily:SSF53383" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33149.1" FT /translation="MLFVIRPGRKKNELEAFFIENEPEKLSEMRNLKAERIFRLIMREG FT RLFKVLEGSQYRNPKEIEKLLRQARIVLVNADEWEDYFRRRLQNKRVEKAELCRLCLLE FT GRITVLTPGNRIKYRNEYICERCAEDELKRELRFRFNSIAMFDQAKKLLDRFRDLDKVL FT YAFDPRFDPTKHPEVTKWDELKAKHIKVEKIRVDELSLPEKFKEVLKAEGVKELLPVQS FT LAVKNGLLEGENLLVVSATASGKTLIGELAGVPKAMSGKKLLFLVPLVALANQKYEDFK FT RRYSKLGLRVAIRVGMSRIKTRDELVVVDTGIDADIIVGTYEGIDYLLRAGRKIGNVGT FT IVVDEIHTLDDEERGPRLDGLIARLRRLYPKAQFIGLSATVGNPEELAKELGLKLVLYD FT ERPVDLERHIIIARNESEKWRHIANLCRAEAMRKSRQGYRGQTIVFTFSRKRTHELSAY FT LTSKGLRAKPYHSGLPYKQRKLTEMEFLAQRLDVVVTTAALGAGVDFPASQVIFESLAM FT GNKWLSVREFHQMLGRAGRPLYHEKGKVYLIVEPGRKYSAQMEGTEEEVAFKLLTAPIE FT PVTVEWSDELEQDNVLAHSCVFNRLDVIEEVQERCLGANQSAEKVLEKLEEFELVRLKK FT PFVEVTPYGRAVSMSFLLPKEAEFIRKSLREKPARWIALKLHPFENLYLSGTLQRELEG FT AVRGRLSANVFSPSFASILEELEKVIPELSPNAAERLFTIYQEFFMCGEEDCTEYAMER FT VGNLIIELRRSGKHPTQIAEHFRKVYGLIVYPGDVFTWLDGIVRKLEAIERIARVFRVR FT KAEEDAKLLRKEIEEGRTLSDQDKRERESVRSGAPSVPGPLLRDRGRGRKSPGTRNASP FT PRRGRGI" FT gene complement(618150..618947) FT /locus_tag="TGAM_0648" FT /note="tg0648" FT CDS complement(618150..618947) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0648" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF63 family; 7 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR002749" FT /db_xref="UniProtKB/TrEMBL:C5A4I8" FT /inference="protein motif:CDD:COG1967, Predicted membrane FT protein [Function unknown]" FT /inference="protein motif:CDD:DUF63, Membrane protein of FT unknown function DUF63" FT /inference="protein motif:COG:COG1967 Predicted membrane FT protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01889 DUF63 FT InterPro:IPR002749 Protein of unknown function DUF63" FT /protein_id="ACS33150.1" FT /translation="MVMMLEAVWKFFNQYFWEPMFTRSGYNPINTLVYALLFGLGVVYS FT YRYIIKPLKIKVDERLFWAVTPMVVFGATLRALVDGGVLPQHPLLLTPGIFFTAFFLIV FT PALVADAKLKTYPKITIVWGTILALWANYLLITHAKNWKPYELTMIHTLISWAIVLAFY FT KWRPFDKLYLYAVLAHYYDMGSTVVGLHYYGYREVHWIEHHLVQWFGAYIYYPWITVIL FT IAVYYGLKYLVPDEEERRFWYLAIYVLGLGPAIRDPAQMVLQI" FT gene 619031..619717 FT /locus_tag="TGAM_0649" FT /note="tg0649" FT CDS 619031..619717 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0649" FT /product="Conserved hypothetical protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR010397" FT /db_xref="UniProtKB/TrEMBL:C5A4I9" FT /inference="protein motif:CDD:COG2245, Predicted membrane FT protein [Function unknown]" FT /inference="protein motif:CDD:DUF996, Protein of unknown FT function (DUF996)" FT /inference="protein motif:COG:COG2245 Predicted membrane FT protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF06195 DUF996 FT InterPro:IPR010397 Protein of unknown function DUF996" FT /inference="protein motif:superfamily:SSF90123 Multidrug FT resistance ABC transporter MsbA, N-terminal domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33151.1" FT /translation="MCIMEAVTNSGSNSETVDISTERTLGLIGSVLGLASIVRTSVSGL FT LALIGAVLILVALYGIGNKLEDERPFNYYLKAIIVIFVLIMVGVIVIAAALVVSSGSTS FT SMENEFIMSPGSDITIIEEESPHLTGEGIVLLVIGAGIIIAGLIAGGYFQKKAWEAMYE FT LTGVEAFQNAAKFLWWGVLTIIILIGAILLLISAIFQIIAFANLPKRLSKRSTPPAPTP FT VEELSW" FT gene 619775..619897 FT /locus_tag="TGAM_r017" FT /note="tg_5SrRNA1" FT rRNA 619775..619897 FT /locus_tag="TGAM_r017" FT /product="5S ribosomal RNA" FT gene 619903..619980 FT /locus_tag="TGAM_r018" FT /note="tg_tRNA-Asp" FT tRNA 619903..619980 FT /locus_tag="TGAM_r018" FT /product="tRNA-Asp" FT /note="codon recognized: GAC" FT gene 620362..621498 FT /locus_tag="TGAM_0650" FT /note="tg0650" FT CDS 620362..621498 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0650" FT /product="Membrane protein, putative" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR018650" FT /db_xref="UniProtKB/TrEMBL:C5A4J0" FT /inference="protein motif:CDD:COG3463, Predicted membrane FT protein [Function unknown]" FT /inference="protein motif:COG:COG3463 Predicted membrane FT protein; S Function unknown" FT /protein_id="ACS33152.1" FT /translation="MVRKEHRMFVLITFVFTLFIMLFSVLRFETLSKYGIHDIDLQIFS FT ESLQTTLTGQGFFFNEWEWQHWRAWSHFGTHNSPILFLLLLPYALVPSQYTLILLQDLM FT VTISAIVLFKFAGYILNDEKKALIVSVAFLMNPITHGIVRYDFRPDVLAMPFMFLFAYC FT VAKNDTKKSVLAALFVVSVKEDAGLFLIAYSMFEILSKRGFAIRTWLEEKRAVGFALLG FT LSWILISIFLIIPHFNTSHRYIYFILYKPEIGKRAFIFAVALAKLVVLFLSVAFVPLRR FT PAYWLPLVFLWSENAFSSRLEQAAIGFQYDYQLLPMAFIVLVYALKEYGSANPKKLLLF FT SFISALIFSPMVGVIDAYPVTLGISFWKYIKLFWGRGL" FT gene 621671..622531 FT /locus_tag="TGAM_0651" FT /note="tg0651" FT CDS 621671..622531 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0651" FT /product="SSV1 integrase-like protein" FT /db_xref="UniProtKB/TrEMBL:C5A4J1" FT /inference="protein motif:CDD:COG4342, Uncharacterized FT protein conserved in archaea [Function unknown]" FT /inference="protein motif:COG:COG4342 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:Gene3D:G3D.1.10.443.10 no FT description InterPro:IPR013762 Phage integrase-like, FT catalytic core GO:Molecular Function:DNA binding FT (GO:0003677), Biological Process:DNA recombination FT (GO:0006310), Biological Process:DNA integration FT (GO:0015074)" FT /inference="protein motif:superfamily:SSF47823 lambda FT integrase-like, N-terminal domain InterPro:IPR010998 Lambda FT integrase-like, N-terminal" FT /inference="protein motif:superfamily:SSF56349 DNA FT breaking-rejoining enzymes InterPro:IPR011010 DNA FT breaking-rejoining enzyme, catalytic core GO:Molecular FT Function:DNA binding (GO:0003677)" FT /protein_id="ACS33153.1" FT /translation="MAGPAGFEPATSGLEGYSFNELWASERSNFVEWLSAEVREETKKD FT YVRSLDRFFGRHVIKTLGDLEKALRAEGQKRNLAKAIRKFSKYLLELGIIEQSTYEKIK FT AVVKLKQTGVRDVFISDEEVMTAYLEVRKRGKPAETLFLLVAFSGIRLKQAVELLKTYD FT YTKLQIISEKAARYPMFSISKGKKRAFWAYGPREFFEELEPWEVKYNTAKDLVSYGRVS FT ANTIRKWHYTFLIRQGVPADIADFIQGRASQRVGATHYLNKTLLADEWYSAVVGELKKV FT LEGSK" FT gene 623332..623691 FT /locus_tag="TGAM_0652" FT /note="tg0652" FT CDS 623332..623691 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0652" FT /product="Conserved hypothetical protein" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4J2" FT /protein_id="ACS33154.1" FT /translation="MRSKSLAQLVLFILIAAFWYKIAWPVMTKEALALGAVGGLLIHWA FT FTNKGSRAVALIEPGTSGWRVMMYDMMFVSFLTALAQQAGDVSALLDALKTSVQNLALL FT LALAGGIGVDYSVGG" FT gene 623799..625850 FT /locus_tag="TGAM_0653" FT /note="tg0653" FT CDS 623799..625850 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0653" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4J3" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR014766" FT /db_xref="UniProtKB/TrEMBL:C5A4J3" FT /inference="protein motif:Gene3D:G3D.2.60.40.1120 no FT description" FT /inference="protein motif:superfamily:SSF49464 FT Carboxypeptidase D, a regulatory domain InterPro:IPR008969 FT Carboxypeptidase regulatory region" FT /protein_id="ACS33155.1" FT /translation="MKRFGLVLALLVLFGTLTVGTVRAEGTYSVVAYLSTLHEVNLDNA FT LSVLGGTREGDCVVAYKNVNGLEHPFEIRVYQSRVEVWYSGQKAEILKVLRVVDPSGVV FT SAGDVTVNDLYIVHVLLNTYNDLVSGGAVQEGYDGIELRSMPQGIKVWYHYAAGRSKEG FT TTTGSTITVANGSQYVVSFEGHAGNAYDDRVKITIGSSVIFQNGGASVNSYKVGSWSGS FT VKVEVYDSASDQGYAYVVVTYFDGDVTISNKFGFLKYIDIKPYTSSVTFNFRDALTGQP FT LTGVTVKDTDGTVLGTVDDEGSLELARGQHTLTFEKTGYWSVTKTIDVQNDTSVSVEMY FT PSSAAFKLENFPSEITIPEHTVYTLTFTISPINTDATYNTYLSLSGLSDVLEVRKDGSL FT VSPENGRYYLGDISSPTQISIKFKAGEQGTNGFTMTLESHDAVMTKTYTTTKQVVYKVE FT PLPFNVQMSSEWQVGTNELRISEASGQSYLVTAVLKDSSGNEVWSDSHAFSPYEAHTFT FT VQIPKEGSYTLELMWNGHTAVYNVQVNPAISLKTRTLTVEKGSEGTIILHIKNPSSSVQ FT YYTIKVSGGFLPKEISQSISVAPLTEKDVSIAFAVPDKLTYDAYELQVQVLQGDREVFK FT DSVAVTISGSSSDGFIPLGEGGSGTTMLLLAGGGLAAVLGLMMIRRRR" FT gene 625854..628079 FT /locus_tag="TGAM_0654" FT /note="tg0654" FT CDS 625854..628079 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0654" FT /product="Conserved hypothetical protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4J4" FT /protein_id="ACS33156.1" FT /translation="MRPVSFFSIFKKRAEEEQEKQKKRGDWRSFTSIALMLMLLVSVYA FT EPVAAWPGEGLFSSVGDALSSVGDAVSSAAHAVVDNIEGGIAGALAGAATGAMVGSAVP FT GIGTAIGAGVGALVGFVGGVYAEYKAKQTIHEITHPGGPGVGISYEGINATKDDLSKNS FT DLLKNYQIVDNAQSKAYSELAELLAKLATKQTEYSLHMTGSTGNIQLKLFGPDEIRGFS FT AFPVKLRILTSADPIERNVIHLKKITMYVINPDTGTAYYTYTKTFTGNETSLNGGAYEI FT TTFLKVPDKYDYDVVQAIQTGQITQDLINKLKNAETPQFEIFVEVDAVKEDWSLDSNGN FT WVHVRDIPLSVEAQTVSVYTHVTASRDVVLFQTGLNASLPSDMANLVMGKFAPFIAEQW FT GGISDVIVRPYATPVHVADSAATWKFFVAPNHGFLTMFDKSPEVYDDFEVFAIRVLQGG FT SFELADRRTNSLGDLSGETVKEAYGITKYTTGSDVVNYRVYALGLIWIKRDDGTKIPVW FT VLVQPHMTVLDMEKLALDDTRIQRILPIFDDKKITETELQTLKAELDSVKQDIQEKIQA FT AEQLKKMAEANGNTEAAEYADRAIKYYQLELKMLDQATQTEDAQLALNYLNAAKKYEYA FT GDFEKQAADKAYKGDSEGAKALDSQAQEYKKAGDDYVPHFSVGGLADTILGNLKDPKYL FT ALLAVLLIGGYYLFGRMGAMVGAAIWFALVIGIPALKALVAWLGTKL" FT gene 628091..628570 FT /locus_tag="TGAM_0655" FT /note="tg0655" FT CDS 628091..628570 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0655" FT /product="Conserved hypothetical protein" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4J5" FT /protein_id="ACS33157.1" FT /translation="MGDGKGGGAGPRFSKWSFRVLVTAILALIAWYAGQHNVTAQEFNE FT AFASIPLAAIILAMFFDYGLDSGKLYDKMIKKPSNRMLGLIYAVIASVVFFFAFLWIIT FT GNIQAASAASVVASAVVALLVLMPNTGTSEWILWLWIAETLVTAGKFLTILPGVS" FT gene 628390..629115 FT /locus_tag="TGAM_0656" FT /note="tg0656" FT CDS 628390..629115 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0656" FT /product="Conserved hypothetical protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4J6" FT /protein_id="ACS33158.1" FT /translation="MDHYRKHTSCQCGFSRSLRSGCLISPHAEHWNFRVDSLALDCGDT FT CHGWKVPHNPAGGELMALDGLKKPRHLLILFRGILAGLMFAGLLWYGSSHEATVSELTK FT VIASTSVFIIVAAEILDKIAGREDYAKVYGWAYGKLSGGKGGTLTAIFSVLLISAVIFA FT VSLYFIAGSITFSLNSYSPATLLWAGLVATYITLPETGDNELLLWIWLGATIATKGQYL FT SSALTIPALTRLAGILLKL" FT gene 629127..629465 FT /locus_tag="TGAM_0657" FT /note="tg0657" FT CDS 629127..629465 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0657" FT /product="Conserved hypothetical protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4J7" FT /protein_id="ACS33159.1" FT /translation="MLGRIAAALIAYLLCIFKFQDSMVTVGQLFGLTGFWALFIPSALI FT GLSVYRIADLDHWGLWDAASFLVIGSIAMLAMTGNPEATMYELIKGVVSFSVAAILGAR FT AAITGGRH" FT gene 629465..629698 FT /locus_tag="TGAM_0658" FT /note="tg0658" FT CDS 629465..629698 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0658" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4J8" FT /protein_id="ACS33160.1" FT /translation="MDVNSAVTQLQDLAHTHPYLALAIILFLLSFLSKNKVLDYLLWFL FT AALALLKEFSLFGTLVEFLKGIPEMLKQIGGV" FT gene 629702..630499 FT /locus_tag="TGAM_0659" FT /note="tg0659" FT CDS 629702..630499 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0659" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="InterPro:IPR013783" FT /db_xref="UniProtKB/TrEMBL:C5A4J9" FT /inference="protein motif:Gene3D:G3D.2.60.40.30 no FT description" FT /inference="protein motif:superfamily:SSF49265 Fibronectin FT type III InterPro:IPR008957 Fibronectin, type III-like FT fold" FT /protein_id="ACS33161.1" FT /translation="MRKKERQLITLGLVVLFAAIAWWAYNQYGADTGVLLNLDNQSNST FT ETYQLAISDLSASVDQSTGHVLVSFKLANEEHFNISSVEVLYALNVADPNNATFSALDV FT TSENGTYKAEIPASFGDTVYYKVKVVYDTGKELVTDVHTITVVDTTEPTLSSVSIDYNN FT TAATFSIDFNATDNDAIATYYVYYADLGTNSTIDNTTAFTPVNATVTPITLTNITEGNY FT YAFYFKVEDLSGNIATLYNETSPLILLANSSATWPQVYPESSS" FT gene 630511..630996 FT /locus_tag="TGAM_0660" FT /note="tg0660" FT CDS 630511..630996 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0660" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4K0" FT /protein_id="ACS33162.1" FT /translation="MMPTYRSSPSFSRVVVRLFAVVTLIFLLYYGYSTFNETDPLKERL FT YELGYPEKGYIVEDGKILWSDGHLTVIQGDYIENYPITAEQAYNIVLQYLASYNAKLKK FT YDYKLEPKKSSLTEKEKDGQLYWVFELKLKAGRDSMFAGFAWVNRKTGTVDIRGILG" FT gene 630888..632111 FT /locus_tag="TGAM_0661" FT /note="tg0661" FT CDS 630888..632111 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0661" FT /product="Conserved hypothetical protein" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4K1" FT /inference="protein motif:BlastProDom:PD008735 FT Q86SC9_CIOIN_Q86SC9; InterPro:IPR011575 RasGAP GO:Molecular FT Function:Ras GTPase activator activity (GO:0005099), FT Biological Process:negative regulation of Ras protein FT signal transduction (GO:0046580)" FT /inference="protein motif:CDD:Smc, Chromosome segregation FT ATPases [Cell division and chromosome partitioning]" FT /inference="protein motif:Gene3D:G3D.1.20.5.170 no FT description" FT /inference="protein motif:Gene3D:G3D.1.20.58.60 no FT description" FT /inference="protein motif:superfamily:SSF46579 Prefoldin FT InterPro:IPR009053 Prefoldin" FT /inference="protein motif:superfamily:SSF46966 Spectrin FT repeat InterPro:IPR002017 Spectrin repeat" FT /protein_id="ACS33163.1" FT /translation="MGFRVKAQGWPGFHVRGFCVGESEDRHGRYKGHFRVITVRRLASI FT VFIYILIGSLGQVLAAGSYTWQGTLQAGQVLYISDNYLNASVTVLSRPVALIQVGNIPY FT FLANGTVILGEMELTVRPLNESAMEVIVQSDKPFSATFWPVVVTRTVIVNQTNETMIRE FT LQALVNQLNATLQEKEALVQNLTLELAEKEKEVQNLSSQIEILREQITALERQNAELKT FT NNSLLAENNTLLLAKVENLTEELNTSRALILQLNSTLHEKNLVIENLAAQIQELNEENV FT KLKRQVSELENRLKTSNLTALQARLLNLTKENRELKAELANLTSRYNQLKAKADFLEQQ FT NGEYRQIIQQVMEGESQQEEQSYIEKAKKERLVGSVLWKSLIGSVIVVGLIGYGLYKKK FT RSWELGGL" FT gene 632270..633571 FT /locus_tag="TGAM_0662" FT /note="tg0662" FT CDS 632270..633571 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0662" FT /product="AAA superfamily ATPase, putative" FT /note="Contains P-loop nucleoside triphosphate hydrolase FT domain" FT /db_xref="GOA:C5A4K2" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/TrEMBL:C5A4K2" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMSmart:SM00382 no description FT InterPro:IPR003593 AAA ATPase GO:Molecular FT Function:nucleotide binding (GO:0000166), Molecular FT Function:nucleoside-triphosphatase activity (GO:0017111)" FT /inference="protein motif:ProfileScan:PS50101 ATP_GTP_A2" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /protein_id="ACS33164.1" FT /translation="MGVSIYIGKNSDKEKRYIDLKETEANHITFLGPSGSGKTTVMRAI FT AEEIFDKVPGALIIVIEQKYDKNKARELMNFLALITKRKGSDFVKENFQDLLTYYNILK FT NDGVLHGKPGDFAFGWPNWPFTTVPPFPNDRHSILSWHGLKPKSFPVKRIVFRPTRDIS FT AIEKDNNCIAVNGKIRYKDVDFDFISRLAQINRNTIYGRVIKQGWDLEKKRDPDELERF FT GKEWEKKYRPNSNVPSQTLLSILEVCALLRSDTIFSKHKDFTSELSTDVINVIDFSANS FT ELTPAEEAWIFKHLVMYIVSKFVRFRNTPVFFIIDEVQNLLQHSDGRKALDKLNREGRS FT NWVNIISGTQYMYGLPAFLVYGAAHIGIIGRIASADDEMLLRKVIRDFHRIKNPKVKSF FT SEYKNVKPWLKGRGWFSFDKMYTERMYFRPPQSL" FT gene 633573..634277 FT /locus_tag="TGAM_0663" FT /note="tg0663" FT CDS 633573..634277 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0663" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4K3" FT /protein_id="ACS33165.1" FT /translation="MMKMFGFRKKKNEKAQQVDALQEKTDTIPILPSTRLEERAKKLRE FT LNYKFAQVYEPKQRVIIWFNGKESRVIGYPIGLREDLNDYVILYQVRPPSWLDSLVHSL FT LRVVGKSPPTALIRVPKKIAYFGDETITILASAFIMNEHYEYEAVPLSLDETDAKLYLA FT LKKENDMLWDLISIIRYRVPEVVEDAMKMNPRIKTYMSTKQQNPDEGTKEEKFGGVEVA FT FEDNPFRRWRLP" FT gene 634277..634591 FT /locus_tag="TGAM_0664" FT /note="tg0664" FT CDS 634277..634591 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0664" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4K4" FT /protein_id="ACS33166.1" FT /translation="MGEGAYQTVPAELDALLGAHSEDDGETKSKTSNSSGDSRPGKLPK FT AKLNKKLIAAIVRRLRILYLDAPKKEDRILINEILDDLEQLMILNGIGLELLGGKPKEE FT " FT gene complement(634630..635592) FT /locus_tag="TGAM_0665" FT /note="tg0665" FT CDS complement(634630..635592) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0665" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4K5" FT /inference="protein motif:superfamily:SSF55194 Ribosome FT recycling factor, RRF" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33167.1" FT /translation="MKLNMRLDVNIIRSVTILMVVVAVFIAGLAVLIGLNTREQMLLQS FT VLVMANVLMAAVVALQALATMDSVEQAKKQAELMNKSLMEMKKQRMNIEFMKNEIIGYI FT STIEASLRSNLQEHSNGRAGYEVGSYLSLDYGRHTLSLQEQGMNLRINKKIQKLIEQYN FT VDLEKYNELIRKINANTKEIIEKLEEDSALNARLSQVSKEIAEKSNKPEVAPKIIIPEL FT VYQFKEDISKIEPPRFGLLGLDPKKDKRYRLELWESTKEVFLKYLQNNNIPIYNKLIER FT SREMEELKKMTISLSEKVERMKEELLQNEKELEERIMNL" FT gene complement(635602..636390) FT /locus_tag="TGAM_0666" FT /note="tg0666" FT CDS complement(635602..636390) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0666" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4K6" FT /db_xref="InterPro:IPR009038" FT /db_xref="UniProtKB/TrEMBL:C5A4K6" FT /inference="protein motif:HMMPfam:PF01105 EMP24_GP25L FT InterPro:IPR000348 emp24/gp25L/p24 GO:Biological FT Process:transport (GO:0006810), Cellular Component:integral FT to membrane (GO:0016021)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33168.1" FT /translation="MSEDVPSLKRIAEPRSLKPAPGVVVGYRRVRTKGTWAVFIISLIM FT VAIGLALIVHPPMSSKVAYTIDDELKPQYYFHPWFVLKKGEKLEVRGTVRGGNNDIWIY FT VKEGGRTVEDFKLVKSPVDVIFTAPEDGNYTLYIDNSMSLVSSKILHLELIRHYYDYVP FT GGLFLFFGFIALLVSLIGLMIGQKRLMIRVGDETYEFWPTNWGKVNVAVNGVTLDSKVK FT PGDKFRIGPNDEHILEIKMVGRFFKKTGFFVDGREVGRLP" FT gene 636574..636954 FT /locus_tag="TGAM_0667" FT /note="tg0667" FT CDS 636574..636954 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0667" FT /product="Transcription regulator, putative" FT /db_xref="InterPro:IPR016752" FT /db_xref="UniProtKB/TrEMBL:C5A4K7" FT /inference="protein motif:COG:COG2002 Regulators of FT stationary/sporulation gene expression; K Transcription" FT /inference="protein motif:superfamily:SSF50692 ADC-like FT InterPro:IPR009010 Aspartate decarboxylase-like fold" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33169.1" FT /translation="MGEPKEPLAKFHAKVTRGGQFTFPLWTRVYHELDIGDYVELIVRV FT KHGQDIKRGMFVAKLVDKGNITIPKGLRDEMGIEKDSVIEILVIKAYRIKDLFGDHSNL FT IKQLSLSKYKLLTPEEERKLLS" FT gene 637432..638376 FT /locus_tag="TGAM_0668" FT /note="tg0668" FT CDS 637432..638376 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0668" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4K8" FT /protein_id="ACS33170.1" FT /translation="MVRAMTQKGRKRRNRSGPGRPPVFDEPVYTAFWMEKEDKERLYEQ FT KGTLPVGVYVGMLLRSKSAEKAILMRQLAEKDRLLEEKDRCIEELEKLVERLQDELEKW FT RFRAEACEKNKPKLSSKWSKILLAIPKAVEEGLTWNDLMRDLGILDPQEQVAVMQRFFI FT TIDENGKIPEVIKPLQGIKELEGIVLYRENGVNVRFAKIVREDTLKAAKSLRVEAPKPA FT KKGRPAVKVSRAEIEKSLKAWLKQYEQWASNWRTKEKAEQFLKSVGNNGLRRLVREYGF FT DVVAEVVGSNADYRALFGPFLLKLQEKKVEVKA" FT gene 638373..638618 FT /locus_tag="TGAM_0669" FT /note="tg0669" FT CDS 638373..638618 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0669" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4K9" FT /protein_id="ACS33171.1" FT /translation="MSEVADFWSWVAQEKAKLDEVLRDREEPPTLIDWLEREITEAREA FT AFSLKIRGENGAEYWTGYADALEDVLKAIQRREVRA" FT gene 638680..639066 FT /locus_tag="TGAM_0670" FT /note="tg0670" FT CDS 638680..639066 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0670" FT /product="Hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4L0" FT /protein_id="ACS33172.1" FT /translation="MGGARSLPRPRRERPLSRNQAQGILQKEGGSLMTWLEARAPNFSK FT WKRLVDLSRVAALDVIENEKNAVIGLRSANDAELAKLVVEKEKLQETIDALTLLIEQSK FT QFSDAKVFTLEEVLQANTRQGVWA" FT gene 639057..639455 FT /locus_tag="TGAM_0671" FT /note="tg0671" FT CDS 639057..639455 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0671" FT /product="Hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4L1" FT /protein_id="ACS33173.1" FT /translation="MGMTRFVSLSEELAVKLEYARAEWEAQKVQILIENDEVPEGHEVA FT LELKDLVSYLESLEIPTRVVIDSEVYKVKLRKKVPYDRYREILAGLNNLSHARWDKKAR FT AILVDRTREMEEQLEVEEIVITPKEVRA" FT gene 639455..639979 FT /locus_tag="TGAM_0672" FT /note="tg0672" FT CDS 639455..639979 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0672" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4L2" FT /inference="protein motif:Gene3D:G3D.3.30.1050.10 no FT description" FT /protein_id="ACS33174.1" FT /translation="MASRTAFVYQDALSIDDAFTYFKRLMRDAENRVAFSRALQKARKG FT LDVHMYVTDIDSLIVQYLRRNGVRGFRFTGFELKNMNPRSAIVNGKVKVNGKQYEGHKW FT FAEKAGMDFYYLVNLGREFLVWNIRNTYADFRWYGEGHAHDYYAFVDLDDVIRVPAQEL FT PETLRFLLWRR" FT gene 639986..640324 FT /locus_tag="TGAM_0673" FT /note="tg0673" FT CDS 639986..640324 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0673" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4L3" FT /protein_id="ACS33175.1" FT /translation="MAKILGRLKVVCDDGTTISIAEDPLNRFFDEERIKELLRLQKKAL FT EEWIEVNESFVKEVLEEEKKYGFDADRYPRDLIEKLKFVEGLDEEIASTKRELEAIKRL FT LKECDGCE" FT gene 640511..640999 FT /locus_tag="TGAM_0674" FT /note="tg0674" FT CDS 640511..640999 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0674" FT /product="Hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4L4" FT /protein_id="ACS33176.1" FT /translation="MDDFVAFRGLHACMGMPQESRGVMAVSEASVSPVFLPEAIEEARA FT DGNEWFLCAELYAILALGVLDKWVSRRKLAKLLCELVRRDLRVRRSIDLTERECYENVL FT DIVTNPLYLSEAFEYKRSMVRLSEFGEVVFNEIEGALSPERFFELKRKILEIWKEGRI" FT gene 641475..641939 FT /locus_tag="TGAM_0675" FT /note="tg0675" FT CDS 641475..641939 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0675" FT /product="Hypothetical protein" FT /note="Some similarity with Orf181 [Pyrococcus sp. JT1]" FT /db_xref="UniProtKB/TrEMBL:C5A4L5" FT /protein_id="ACS33177.1" FT /translation="MKPKIALPENEFKLKGLYNFLELIFDDDEHRIGIAEALLERLRQK FT RETYSEDWLEVILEYLGEQDLLEQYHELLNKFDNGEISKTKINKLIEKELRERGYPAAK FT LRNDWAIVKKTLIKLGIVSRTSNRLNLSWDFVERLNTLAKFYNLWRAGEI" FT gene 641798..642154 FT /locus_tag="TGAM_0676" FT /note="tg0676" FT CDS 641798..642154 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0676" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4L6" FT /protein_id="ACS33178.1" FT /translation="MGNSQEDTHKTWDCVQNFQQAESVVGFRGAAEYTGQILQLMEGWR FT NMIRLKIYKEDGVWCVEDLAGYEVGCGRTIAEAFKDFGENLEAAIEEYVEDNDLDKFHI FT SAIALRYALLDWLR" FT gene complement(642418..642494) FT /locus_tag="TGAM_r019" FT /note="tg_tRNA-Arg2" FT tRNA complement(642418..642494) FT /locus_tag="TGAM_r019" FT /product="tRNA-Arg" FT /note="codon recognized: AGA" FT gene complement(642576..643244) FT /locus_tag="TGAM_0677" FT /note="tg0677" FT CDS complement(642576..643244) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0677" FT /product="CRISPR-associated protein, Cas4 family" FT /note="Putative RecB family exonuclease" FT /db_xref="InterPro:IPR013343" FT /db_xref="UniProtKB/TrEMBL:C5A4L7" FT /inference="protein motif:CDD:COG1468, RecB family FT exonuclease [DNA replication, recombination, and repair]" FT /inference="protein motif:COG:COG1468 RecB family FT exonuclease; L Replication, recombination and repair" FT /inference="protein motif:HMMTigr:TIGR00372 FT cas4:CRISPR-associated protein Cas4 InterPro:IPR013343 FT CRISPR-associated protein Cas4" FT /protein_id="ACS33179.1" FT /translation="MRADEPPDGGKKMNGEFIEFYASEALSCPRRIYFRLMGYPERWPE FT NVKVRLTQGINTHGVLGEILNKRFGFELEKHLVLRSRKLGFEIHGRIDAFREFPIEIKG FT KTSLPRVPYESHLAQLNVYLRWAEAEYGYLYYVKLHERPLTVISKLDFSNFPVIKGPNF FT RAFEIPYDEKLFKETLRHFYNVKKAYERGKPPKGEYSYLCRFCPYRYLCYPEGNGFERD FT " FT gene complement(643351..643692) FT /locus_tag="TGAM_0678" FT /note="tg0678" FT CDS complement(643351..643692) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0678" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4L8" FT /protein_id="ACS33180.1" FT /translation="MDEDPSGSSWFSRLFGGKKEFLLEQDLSSRAYEEYRRLLMKARPE FT VKGKELRLKLPSGEVFLSEGKLRIRARDQKTAEKILRNLHHYEQPPSLWPAYGLSYSLK FT RHGRPRVRT" FT gene 643553..644659 FT /locus_tag="TGAM_0679" FT /note="tg0679" FT CDS 643553..644659 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0679" FT /product="Met-10 like-protein" FT /db_xref="GOA:C5A4L9" FT /db_xref="InterPro:IPR003402" FT /db_xref="UniProtKB/TrEMBL:C5A4L9" FT /inference="protein motif:CDD:COG2520, Predicted FT methyltransferase [General function prediction only]" FT /inference="protein motif:CDD:Met_10, Met-10+ like-protein" FT /inference="protein motif:COG:COG2520 Predicted FT methyltransferase; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR14244 FAMILY NOT FT NAMED" FT /inference="protein motif:HMMPanther:PTHR14244:SF1 FT SUBFAMILY NOT NAMED" FT /inference="protein motif:HMMPfam:PF02475 Met_10 FT InterPro:IPR003402 Protein of unknown function Met10" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /protein_id="ACS33181.1" FT /translation="MTSGLAFMRSLRYSSYALLLRSCSRRNSFFPPNSLENQLLPEGSS FT SIFLIDLRSIRSHSNSGLFLFKAFSSLFDEATENIITGMRMLNSMRRGTQVIKPRIREI FT LGRELPAELVNLLPKHWVRIGDVLILPLREELEPYKHRIAEVYAEVLGVKTVLRKGRIS FT GEFRETNYEVLYGSDTVTVHVENGIKYKLDVARIMFSPANVKERVRMAKVARPGEMVVD FT MFAGIGHLSLPMAVHGGARVIAIEKSPYTFKFLVENIELNGVWDRMTAYNIDNREFPAE FT NVADRVIMGYVVRTHEFIPKALSIAKDGAVIHYHNTVPERLMPEEPFRTFREIAREYGV FT EVEKLNELVIKRYAPGVWHVVVDVRVFK" FT gene 644703..644780 FT /locus_tag="TGAM_r020" FT /note="tg_tRNA-Lys1" FT tRNA 644703..644780 FT /locus_tag="TGAM_r020" FT /product="tRNA-Lys" FT /note="codon recognized: AAA" FT gene 644930..645007 FT /locus_tag="TGAM_r021" FT /note="tg_tRNA-Glu2" FT tRNA 644930..645007 FT /locus_tag="TGAM_r021" FT /product="tRNA-Glu" FT /note="codon recognized: GAA" FT gene 645505..646614 FT /locus_tag="TGAM_0680" FT /note="tg0680" FT CDS 645505..646614 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0680" FT /product="tRNA (guanine-N(1)-)-methyltransferase" FT /EC_number="2.1.1.31" FT /db_xref="GOA:C5A4M0" FT /db_xref="InterPro:IPR016009" FT /db_xref="InterPro:IPR016742" FT /db_xref="UniProtKB/TrEMBL:C5A4M0" FT /inference="protein motif:CDD:COG2419, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:tRNA_m1G_MT_9, tRNA m(1)G FT methyltransferase" FT /inference="protein motif:COG:COG2419 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01746 tRNA_m1G_MT FT InterPro:IPR002649 tRNA (guanine-N1-)-methyltransferase FT GO:Molecular Function:RNA binding (GO:0003723), Biological FT Process:tRNA processing (GO:0008033), Molecular FT Function:tRNA methyltransferase activity (GO:0008175)" FT /protein_id="ACS33182.1" FT /translation="MKTLADVFRDALREKGIESIGTLSKRFRKSRNKLQDIAIEIVHGK FT GAIFRVPEKTAVAWDLNGNRVEGSYYAYAPLCMADKFEMVLSPEELRSKLPEWPYFIID FT LQLWDKHTQKEKGKVCLQINQSYGLLRDYFTGRELAVTWANEEFRGMFHGPLDRITVYD FT GPTAEFLKEKGIDEVVLLDPWADKVLSEKDFEVRAFIIGGIVDTGHDKKLTPKIGEELE FT RAGIKVRRRKIVLRGDVAGVPDRINRILGIILKMLVEGKSMDEAVYEFQEPLHARWRLR FT KELPKRATRYMVDGKTYRVVEKELFDEYSKWLKIRWEDFVKVLRELDLVALDRKRIHHL FT NKISNARIIKSKLYRVILLKKAAMLCYNC" FT gene complement(646648..647214) FT /locus_tag="TGAM_0681" FT /note="tg0681" FT CDS complement(646648..647214) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0681" FT /product="Hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4M1" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33183.1" FT /translation="MAKWMVYYVDEARAPEEWVSLAQELESLKFKPVRLHTPEDTAGIL FT EGLCEEYGSAVVVKLLGDFYAIPNTGIIMMSKEPKRGDSDDTELTTVKDLVVERLKARD FT TDILITGKKGFENFARDLWKGEIKLPEPWWKNRLKVLALTLILATPVIYFNVELPKLSV FT AQRFALRLALLVILLIAGIRRGYLK" FT gene complement(647312..649978) FT /gene="valS" FT /locus_tag="TGAM_0682" FT /note="tg0682" FT CDS complement(647312..649978) FT /codon_start=1 FT /transl_table=11 FT /gene="valS" FT /locus_tag="TGAM_0682" FT /product="Valyl-tRNA synthetase (valS)" FT /EC_number="6.1.1.9" FT /db_xref="GOA:C5A4M2" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR001494" FT /db_xref="InterPro:IPR002300" FT /db_xref="InterPro:IPR002303" FT /db_xref="InterPro:IPR009008" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR013155" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR022874" FT /db_xref="UniProtKB/TrEMBL:C5A4M2" FT /inference="protein motif:COG:COG0525 Valyl-tRNA FT synthetase; J Translation, ribosomal structure and FT biogenesis" FT /inference="protein motif:FPrintScan:PR00986 TRNASYNTHVAL FT InterPro:IPR002303 Valyl-tRNA synthetase, class Ia" FT /inference="protein motif:Gene3D:G3D.1.10.730.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.510.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11946 AMINO ACID FT TRNA SYNTHETASE" FT /inference="protein motif:HMMPanther:PTHR11946:SF2 FT VALYL-TRNA SYNTHETASE InterPro:IPR002303 Valyl-tRNA FT synthetase, class Ia" FT /inference="protein motif:HMMPfam:PF00133 tRNA-synt_1 FT InterPro:IPR002300 Aminoacyl-tRNA synthetase, class Ia" FT /inference="protein motif:HMMPfam:PF08264 Anticodon_1 FT InterPro:IPR013155 tRNA synthetase, valyl/leucyl, FT anticodon-binding" FT /inference="protein motif:HMMTigr:TIGR00422 valS:valyl-tRNA FT synthetase InterPro:IPR002303 Valyl-tRNA synthetase, class FT Ia" FT /inference="protein motif:ProfileScan:PS50166 IMPORTIN_B_NT FT InterPro:IPR001494 Importin-beta, N-terminal" FT /inference="protein motif:ScanRegExp:PS00178 FT AA_TRNA_LIGASE_I InterPro:IPR001412 Aminoacyl-tRNA FT synthetase, class I" FT /inference="protein motif:superfamily:SSF47323 FT Anticodon-binding domain of a subclass of class I FT aminoacyl-tRNA synthetases InterPro:IPR009080 FT Aminoacyl-tRNA synthetase, class 1a, anticodon-binding" FT /inference="protein motif:superfamily:SSF52374 FT Nucleotidylyl transferase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33184.1" FT /translation="MLPKNYDPNEIEPKWQKFWLDEKIYKYELDEKRPSYAIDTPPPFT FT SGTLHLGHVLSHTWIDIVARYKRMTGYNVLFPQGFDNHGLPTELKVEKEFGISKDEPEK FT FLQKCVEWTWQAIEAMRNQFIRIGYSADWDLEYHTMDDWYKAAVQKSLIEFYKKGLLYQ FT AEHPVYWCPRCRTSLAKAEVGYVEEEGFLYYIKLPLADGSGYVPIATTRPELMPACVAV FT FVHPEDERYKDVVGKKVKLPIFEREVPVLADEDVDPSFGTGAVYNCTYGDEQDVVWQKR FT YNLPVIIAINEDGTMNENAGPYKGLKTEEARKKIAEDLEKMGLLYKKEKIRHRVLRHTE FT RSSCMAPIELLPKKQWFIKVKDFTDEIVKVAKEINWYPEDMFLRLKDWAESMDWDWVIS FT RQRVFGTPIPFWVCDNGEVILPDEKDLPVDPRFDKPPRKCSDGSEPKPVTDVLDCWVDS FT SITPLIITRWHEAIKGDGEAKRWFEHNFPTALRPQGTDIIRTWAFYTIFRTYMLTGQKP FT WKDILINGMVAGPDGRKMSKSYGNVVAPDEVIPKYGADALRLWTALAPPGEDHPFKWET FT VDYNFRFLQKVWNIYRFAERHLEDFDPAKAPEELEPLDRWILSRLHRLIKFATEEMERY FT RFNLLTRELITFVWHEVADDYIEMIKYRLYGDDEESKLKAKAALYELLYNVMLLLAPFV FT PHITEELYQNLFRERIGAKSVHLLDWPKFREDRIDEEAEKLGELAREIVGAIRRYKNSH FT GLALNAKLKHVAIYATDSYEALKAIEKDIAGTMNIERLEVIRGEPELEERITEIKPNFR FT TVGPRYGKLVPKITAYLKEHAEEVAKALKETGKVEFEVDGEKVELSKDDVVIRKAVFSE FT GEEVETAVVEDAVIVFF" FT gene complement(650173..650670) FT /locus_tag="TGAM_0683" FT /note="tg0683" FT CDS complement(650173..650670) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0683" FT /product="Hypothetical protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4M3" FT /protein_id="ACS33185.1" FT /translation="MATPEVECREYPPGFVIAQNVFLLLYFGAGFVGMQPLRLSGVPVL FT SVVYALFLALMLLVVLRKHLCTHCYYGKRCATGWGKLSALMFERGSRSYELRVKLAKVT FT WALATAVPVLGISAAYFLTPSRHELVPLLLFLLLTPINFALHRSACEKCGMRRKCPMTM FT AR" FT gene complement(650751..651521) FT /locus_tag="TGAM_0684" FT /note="tg0684" FT CDS complement(650751..651521) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0684" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4M4" FT /protein_id="ACS33186.1" FT /translation="MIGHGEIWDMLENLSREFRYTRELAYQRKEREEHLKFIFDMRGFR FT LVAVGELHYELKTTEGDSFDWLEVETYSKDDMTLLQIGAYTGRWMFVLSSEVMRFLRKL FT MKAGAVLICGYTDDHDLRKVGFEEDNQFLLYEWLVKTVKLGKLEVLPSGLTVVKKELLD FT IEDGLYELLERPGREEREYVLVKSLDSYKLLVSIRESDLTDEECSRDLLEDKAWFSLKL FT VGLPFKLIGRKVENEPLLKRAEEFFQAQVGEDGR" FT gene complement(651577..652482) FT /locus_tag="TGAM_0685" FT /note="tg0685" FT CDS complement(651577..652482) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0685" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4M5" FT /protein_id="ACS33187.1" FT /translation="MARRSGTKNCLRGQRTTLRHRWEKMGVDNYIYLMFDKKPEEVEDF FT LEKEFEVEIRDGEWDDPRMDYLREKGLLGDDFQLVVSGELLFDPSLRTTEWGVIINADF FT YVYTVKGYTILEIHPVSRSRWRFVLSSEVIRLLKQFMKAEPLLICGYRDDTDLTKLGFE FT YNMSYLFINWLPEAIKTGKLEILPSALTAVRKELLKLDEGLYEVSIPWRPNEKGFLFVG FT ELDGYAVILFFGIVDFEDPEDIHESLEEPWEIVWDLVIPVMLPLTNIRKVQNDRWQRMV FT REIFNGHTTGDYSRLKHAGD" FT gene complement(652400..653188) FT /locus_tag="TGAM_0686" FT /note="tg0686" FT CDS complement(652400..653188) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0686" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4M6" FT /protein_id="ACS33188.1" FT /translation="MGDCKSIVAVFDKPWEEVLTRLKEEFGYLEEKRYEGDEGNREQFK FT FYDTRCFRLVSTGYVHFVMRTAEGFGPHECFIVNVFSRGNSTIIDFESWTSRFDFILSS FT ELMKLLKKLARVGALIICGYIYGHEKLRDVFGDYNQFLLYERLAKIVKEGKLEVLPSDL FT TVVRGDILGLEDGLYELVGEPGLYVFVRDLGVEGYKVLLIVGDGLLDDVLYREVLEYEN FT WFSLKITWVIFKRIGQKVGNEELLKRAEDYFKAQVGEDGR" FT gene complement(653230..654288) FT /locus_tag="TGAM_0687" FT /note="tg0687" FT CDS complement(653230..654288) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0687" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4M7" FT /protein_id="ACS33189.1" FT /translation="MIAFALLKLPIEKFLSSGFIVRAGNSKEVLRLGWRRVLALALVLL FT FLGMTVSGASATATFVNATVNNTVAVPPEFGPEKQPGDEIRPQFWWIIGLIILDLAVHW FT FLEHYISPEVAAVYDAVTMFIDPEKIAEKLGIKGAELGIKVISRNKVLIGLFKDNKVVK FT EITYASKEVAEWVANKLGKGYISKIVEKYVVRDGGLKKGEDFDEVVKAMQGLESLGIRS FT VILQKIIIEKGWDVKKLERVINDIKGVPGGDRLFTKIKRGIGDGFYKGRFVLDRVNLGR FT VYIECFGGIRPEQILTQAKYAKSRGVRKIYVYYSRDVFSPGQHYRVMEAIRNAKSRFGV FT DVELVQLTSEFN" FT gene complement(654303..654563) FT /locus_tag="TGAM_0688" FT /note="tg0688" FT CDS complement(654303..654563) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0688" FT /product="Methyltransferase C-terminus, putative" FT /note="Possibly a frameshift with tg0689" FT /db_xref="GOA:C5A4M8" FT /db_xref="UniProtKB/TrEMBL:C5A4M8" FT /inference="protein motif:COG:COG0500 SAM-dependent FT methyltransferases; Q Secondary metabolites biosynthesis, FT transport and catabolism" FT /protein_id="ACS33190.1" FT /translation="MISTRRCSPLQGGRPKLHFKRLVQIVKPDGSVRVFMVDDELNIYT FT VREMRLLAEKHFGKVPNLRGRARAEAQRPAVLAGGGEIMQF" FT gene complement(654478..654768) FT /locus_tag="TGAM_0689" FT /note="tg0689" FT CDS complement(654478..654768) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0689" FT /product="Methyltransferase N-terminus, putative" FT /note="Possibly a frameshift with tg0688" FT /db_xref="GOA:C5A4M9" FT /db_xref="UniProtKB/TrEMBL:C5A4M9" FT /inference="protein motif:COG:COG0500 SAM-dependent FT methyltransferases; Q Secondary metabolites biosynthesis, FT transport and catabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPanther:PTHR11045 FT HEXAPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE" FT /inference="protein motif:HMMPanther:PTHR11045:SF1 FT HEXAPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE" FT /inference="protein motif:HMMPfam:PF08241 Methyltransf_11 FT InterPro:IPR013216 Methyltransferase type 11" FT /inference="protein motif:ProfileScan:PS50193 SAM_BIND FT InterPro:IPR000051 SAM (and some other nucleotide) binding FT motif GO:Molecular Function:S-adenosylmethionine-dependent FT methyltransferase activity (GO:0008757)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /protein_id="ACS33191.1" FT /translation="MHELYTVLAEYYDAIYRRRAERVSREIDFVEKLFQNEAEREVRKI FT LDLACGTGIPTLELARRGYRVMGLDLHEEMLAVARRKAKTPLQEARADSEA" FT gene complement(654849..657776) FT /gene="apu-2" FT /locus_tag="TGAM_0690" FT /note="tg0690" FT CDS complement(654849..657776) FT /codon_start=1 FT /transl_table=11 FT /gene="apu-2" FT /locus_tag="TGAM_0690" FT /product="Amylopullulanase, putative (Apu)" FT /EC_number="3.2.1.41" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4N0" FT /db_xref="InterPro:IPR008960" FT /db_xref="InterPro:IPR011047" FT /db_xref="InterPro:IPR013229" FT /db_xref="InterPro:IPR014766" FT /db_xref="InterPro:IPR015922" FT /db_xref="InterPro:IPR019248" FT /db_xref="UniProtKB/TrEMBL:C5A4N0" FT /inference="protein motif:CDD:COG4945, Membrane-anchored FT protein predicted to be involved in regulation of FT amylopullulanase [Carbohydrate transport and metabolism]" FT /inference="protein motif:COG:COG4945 Membrane-anchored FT protein predicted to be involved in regulation of FT amylopullulanase; G Carbohydrate transport and metabolism" FT /inference="protein motif:Gene3D:G3D.2.60.40.1120 no FT description" FT /inference="protein motif:HMMPfam:PF08308 PEGA FT InterPro:IPR013229 PEGA" FT /inference="protein motif:ScanRegExp:PS00687 FT ALDEHYDE_DEHYDR_GLU InterPro:IPR002086 Aldehyde FT dehydrogenase GO:Biological Process:metabolism FT (GO:0008152), Molecular Function:oxidoreductase activity FT (GO:0016491)" FT /inference="protein motif:superfamily:SSF49464 FT Carboxypeptidase D, a regulatory domain InterPro:IPR008969 FT Carboxypeptidase regulatory region" FT /inference="protein motif:superfamily:SSF49464 FT Carboxypeptidase DCleaning InterPro:IPR008969 FT Carboxypeptidase regulatory region" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33192.1" FT /translation="MKSKKGFKEIWRRKLQALPLMLLLLGGIIGFGANAGFVSASESTG FT FFWAATYTAERSEALSLAYSDSGLAFIGWLNGAGVDHSSAWIVKVNDDGSIAWQKAATG FT NYGFNDIEATGDGYIAVGWANGAEISQNDAWLVKFDEDGNVVWQKAIGGDGDQKAVAVS FT GDAFVGTYNGFPWIVTFDENGSVNWEAVLKGEGSYGFTNVLKDYKYYYAVGWLNGAPLV FT VKFKGDGSKTYWQNVIETSGKAVAIAPAKKGTVTAVITSDGSLLVKFDYFGHLKWEKLY FT RGVQIRALYRDGDYIIAAGEMGGKTLVMKLDGDGNVIKAVTYGSGAFNGLALGDEKAFL FT AGVMSDNALAMAVPAGDLTIPSCELVAPVDITGEDVNLSVNSAHLILSPVESSVVETNA FT EFINTTAEFSSLKAIAPVLSVSDPEGDDHGPGTYTYPTDPVFNRTGLFDITGMDVYETP FT NDYVFYFHFKNLGDNQWNGPNGFSYQIIEAYFDFKDGGNTSAIKLADNGPGANVQFNRP FT WDLAFRVTGWTSKLVLPNMSTVDIEANADLSTNTIIVKVPREYLNFTEDTFYAVLVGSQ FT DGYGVDEWRDVQVEAAQWRVGGGDSDAIIAGVAPRVMDLLVPEWFHPTQEEQLSGYDAK FT DKKLATVDMIPVSENYGFLTVISTPSGAEVSIDGESVGTTPLKYYLVPAGEHNVTVSMR FT NYHEYKETVTVEPKEVTLVNATLEVLKGKLTITSEPTNATVIIDGNEVGKTPLENYTLP FT VGLHQVIVKMPGYKDEVFNVSIQAGKLLTFHVELSPKTGMITINSNPSGAEVYIDGQKV FT GETPLEHYVLPIGLHQVLIKKEGYKDEVFNVSIQEGKELTFNVELSPKTGMITITTDPS FT GAEVYIDGQKVGETPLEQYVLTVGKHTIVIKKEGYKEETHEITVEAGKELKLNYKLTPL FT HTTTTTTTTTTTTTTTSKGGGGTKICGPAALIGLAIIPLLLRRRK" FT gene 657987..659180 FT /locus_tag="TGAM_0691" FT /note="tg0691" FT CDS 657987..659180 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0691" FT /product="GTPase, MMR-HSR1 family" FT /note="Belongs to G-protein superfamily . Contains 1 TGS FT domain" FT /db_xref="GOA:C5A4N1" FT /db_xref="InterPro:IPR004095" FT /db_xref="InterPro:IPR006073" FT /db_xref="InterPro:IPR012676" FT /db_xref="InterPro:IPR013646" FT /db_xref="UniProtKB/TrEMBL:C5A4N1" FT /inference="protein motif:CDD:COG0012, Predicted GTPase, FT probable translation factor [Translation, ribosomal FT structure and biogenesis]" FT /inference="protein motif:CDD:DRG, Predicted GTPase FT [General function prediction only]" FT /inference="protein motif:CDD:DRG, The developmentally FT regulated GTP-binding protein (DRG) subfamily is an FT uncharacterized member of the Obg family, an evolutionary FT branch of GTPase superfamily proteins" FT /inference="protein motif:CDD:Obg, Obg subfamily" FT /inference="protein motif:CDD:Obg, Predicted GTPase FT [General function prediction only]" FT /inference="protein motif:CDD:Obg_like, The Obg-like FT subfamily consists of five well-delimited, ancient FT subfamilies, namely Obg, DRG, YyaF/YchF, Ygr210, and NOG1" FT /inference="protein motif:CDD:YchF, YchF subfamily" FT /inference="protein motif:CDD:Ygr210, Ygr210 subfamily" FT /inference="protein motif:COG:COG0012 Predicted GTPase, FT probable translation factor; J Translation, ribosomal FT structure and biogenesis" FT /inference="protein motif:FPrintScan:PR00326 GTP1OBG FT InterPro:IPR006073 GTP1/OBG GO:Molecular Function:GTP FT binding (GO:0005525)" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPanther:PTHR11702 GTP-BINDING FT PROTEIN-RELATED" FT /inference="protein motif:HMMPanther:PTHR11702:SF36 FT GTP-BINDING PROTEIN-RELATED" FT /inference="protein motif:HMMPfam:PF01926 MMR_HSR1 FT InterPro:IPR002917 GTP-binding protein, HSR1-related FT GO:Molecular Function:GTP binding (GO:0005525), Cellular FT Component:intracellular (GO:0005622)" FT /inference="protein motif:HMMPfam:PF02824 TGS FT InterPro:IPR004095 TGS" FT /inference="protein motif:HMMPfam:PF08438 MMR_HSR1_C FT InterPro:IPR013646 GTPase of unknown function C-terminal" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /inference="protein motif:superfamily:SSF81271 TGS-like FT InterPro:IPR012676 TGS-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33193.1" FT /translation="MEIGVVGKPNVGKSTFFSAATLVDVDIANYPFTTIDANVGVSYAI FT AEHPCRELGCKPNPQNYEYREGKALIPIKMIDVAGLVPGAHEGRGLGNKFLDDLRMASA FT LIHVIDATGKTDAEGQPTDYHDPVEDIEFLEREIDYWIYGILKKGWEKFAKRIKLQHMK FT LEQAIADHLSGIGVTEEDVWEALHKVGLPSDPTKWSDEDLLSFVRELRKINKPIIIAAN FT KADAASDEGIKRLIEEGKKRGYIVVPTSAAAELTLRKAAKAGFIEYIPGSSDFKILKKM FT NPKQEKALELIKEKVLDRFGSTGVQEVINRAVFELLNLIPVYPVQDENKLTDQFGNVLP FT HVYLLPKGSTPRDLAYKVHTDLGRTFLYAVNARTKRRVGEDYELQFNDIIKIVATAR" FT gene 659235..660491 FT /gene="eRF1" FT /gene_synonym="prf1" FT /locus_tag="TGAM_0692" FT /note="tg0692" FT CDS 659235..660491 FT /codon_start=1 FT /transl_table=11 FT /gene="eRF1" FT /gene_synonym="prf1" FT /locus_tag="TGAM_0692" FT /product="Peptide chain release factor eRF/aRF, subunit 1 FT (eRF1/prf1)" FT /db_xref="GOA:C5A4N2" FT /db_xref="InterPro:IPR004403" FT /db_xref="InterPro:IPR005140" FT /db_xref="InterPro:IPR005141" FT /db_xref="InterPro:IPR005142" FT /db_xref="InterPro:IPR020918" FT /db_xref="InterPro:IPR024049" FT /db_xref="UniProtKB/TrEMBL:C5A4N2" FT /inference="protein motif:CDD:eRF1, Peptide chain release FT factor 1 (eRF1) [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:eRF1_1, eRF1 domain 1" FT /inference="protein motif:CDD:eRF1_2, eRF1 domain 2" FT /inference="protein motif:CDD:eRF1_3, eRF1 domain 3" FT /inference="protein motif:CDD:PelA, Predicted RNA-binding FT proteins [General function prediction only]" FT /inference="protein motif:COG:COG1503 Peptide chain release FT factor 1 (eRF1); J Translation, ribosomal structure and FT biogenesis" FT /inference="protein motif:Gene3D:G3D.3.30.420.60 no FT description" FT /inference="protein motif:Gene3D:G3D.3.30.70.480 no FT description" FT /inference="protein motif:Gene3D:G3D.3.30.960.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10113 PEPTIDE FT CHAIN RELEASE FACTOR SUBUNIT 1-RELATED InterPro:IPR004403 FT Peptide chain release factor eRF/aRF subunit 1 GO:Cellular FT Component:cytoplasm (GO:0005737), Biological FT Process:translational termination (GO:0006415), Molecular FT Function:translation release factor activity, codon FT specific (GO:0016149)" FT /inference="protein motif:HMMPanther:PTHR10113:SF2 PEPTIDE FT CHAIN RELEASE FACTOR SUBUNIT 1" FT /inference="protein motif:HMMPfam:PF03463 eRF1_1 FT InterPro:IPR005140 eRF1 domain 1" FT /inference="protein motif:HMMPfam:PF03464 eRF1_2 FT InterPro:IPR005141 eRF1 domain 2" FT /inference="protein motif:HMMPfam:PF03465 eRF1_3 FT InterPro:IPR005142 eRF1 domain 3" FT /inference="protein motif:HMMTigr:TIGR00108 eRF:peptide FT chain release factor eRF/aRF, s InterPro:IPR004403 Peptide FT chain release factor eRF/aRF subunit 1 GO:Cellular FT Component:cytoplasm (GO:0005737), Biological FT Process:translational termination (GO:0006415), Molecular FT Function:translation release factor activity, codon FT specific (GO:0016149)" FT /inference="protein motif:superfamily:SSF53137 FT Translational machinery components" FT /inference="protein motif:superfamily:SSF55315 L30e-like" FT /inference="protein motif:superfamily:SSF55481 N-terminal FT domain of eukaryotic peptide chain release factor subunit FT 1, ERF1" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33194.1" FT /translation="MMLMSHKSAEMYELKKKVEELKKYRGRATELVSLYIPAGYDINKV FT MQQLREEYGTAQNIKSKSTRKNVLGALERAMQHLKLYRKTPENGLALFVGNVSEQEGVS FT DIRLWAIVPPEPLKVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRI FT EVIDELTSNVPGKTRAGGQSARRYERIREQETHEFMKRIGEHANKAFLPLLEKGELRGI FT IIGGPGPTKEEFVEGDYLHHELRKKVIGVVDISYHGEYGLRELVEKASDILRDHEAVKE FT RKLIQDFFKHLVKDTGMITYGEKEVRQALELGAVDTLLISEGYDKVRVRAKCNNCGWSE FT EKTMSEQEFHVYKKKLTHCPKCGSQNITFEKWDVAEELIKMAEEAGSNVEIISLDTEEG FT QQFYKAFGGLGAFLRYKIH" FT gene complement(660493..660663) FT /locus_tag="TGAM_0693" FT /note="tg0693" FT CDS complement(660493..660663) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0693" FT /product="Plasmid stabilization system addiction module FT toxin, RelE/StbE family, C-term part" FT /note="Possibly a pseudo-gene, frameshift with tg0694" FT /db_xref="UniProtKB/TrEMBL:C5A4N3" FT /inference="protein motif:COG:COG2026 Cytotoxic FT translational repressor of toxin-antitoxin stability FT system; J Translation, ribosomal structure and biogenesis" FT /protein_id="ACS33195.1" FT /translation="MRQSPRDKFDIIKLKGSGDLDIYHVRIGEYRIIYSVNWKARRILI FT HKVKKREDAYK" FT gene complement(660635..660766) FT /locus_tag="TGAM_0694" FT /note="tg0694" FT CDS complement(660635..660766) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0694" FT /product="Plasmid stabilization system addiction module FT toxin, RelE/StbE family, N-term part" FT /note="Possibly a pseudo-gene, frameshift with tg0693" FT /db_xref="UniProtKB/TrEMBL:C5A4N4" FT /inference="protein motif:COG:COG2026 Cytotoxic FT translational repressor of toxin-antitoxin stability FT system; J Translation, ribosomal structure and biogenesis" FT /protein_id="ACS33196.1" FT /translation="MTFEVKIKKEAIKALKSLPKANLRKFLELKDALRYEAVPPGQI" FT gene complement(660763..660981) FT /locus_tag="TGAM_0695" FT /note="tg0695" FT CDS complement(660763..660981) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0695" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4N5" FT /protein_id="ACS33197.1" FT /translation="MERVRDVNVRYVMEELERLKVEIQRLEAMLVPIVRGEVSDEELDK FT IEREARDFKEENWIDADELERILEEDS" FT gene 661117..662187 FT /locus_tag="TGAM_0696" FT /note="tg0696" FT CDS 661117..662187 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0696" FT /product="Prokaryotic ATPase, AAA superfamily" FT /note="Contains Archaeal ATPase domain (PF01637)" FT /db_xref="GOA:C5A4N6" FT /db_xref="InterPro:IPR011579" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:C5A4N6" FT /inference="protein motif:CDD:Arch_ATPase, Archaeal ATPase" FT /inference="protein motif:CDD:COG1672, Predicted ATPase FT (AAA+ superfamily) [General function prediction only]" FT /inference="protein motif:COG:COG1672 Predicted ATPase FT (AAA+ superfamily); R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPfam:PF01637 Arch_ATPase FT InterPro:IPR011579 Prokaryotic ATPase" FT /inference="protein motif:superfamily:SSF46785 'Winged FT helix' DNA-binding domain" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /protein_id="ACS33198.1" FT /translation="MLFDPRPKSKREEIFDREKELNSLLGGIEEYPITVLIGIRRVGKS FT SLLRVALNEFNGLGLYLDARRLYAAGGGAISPAVLVDEIRKILLGKGRFGFLSGIKLES FT VNLAGVKIAPKEMTIIDVFELLNGLGERFGRVVLAFDEAQYLRFYGPRGGKDLLAGIAY FT AYDSLPDLGFVFTGSEVGLLHDFIGIDDYSSPLFGRVYEEVEVRPFQRGVSEAFLRAGF FT EEVGLKVPDEEIKRAVDGLDGIPGWLVEFGFNYWKSGSFERAMERTVERARVMIREELL FT ELEKRSPRYALILRAIAIGLTRWRDIKDYVEAKGGPITNARLSALLKNLEKMGWVRKES FT GEYRIIDPLVEKILKS" FT gene complement(662188..664110) FT /gene="argS" FT /locus_tag="TGAM_0698" FT /note="tg0698" FT CDS complement(662188..664110) FT /codon_start=1 FT /transl_table=11 FT /gene="argS" FT /locus_tag="TGAM_0698" FT /product="Arginyl-tRNA synthetase (argS)" FT /EC_number="6.1.1.19" FT /db_xref="GOA:C5A4N7" FT /db_xref="InterPro:IPR001278" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR005148" FT /db_xref="InterPro:IPR008909" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015945" FT /db_xref="UniProtKB/TrEMBL:C5A4N7" FT /inference="protein motif:CDD:ArgRS_core, This is the FT catalytic core domain of Arginyl tRNA synthetase (ArgRS)" FT /inference="protein motif:CDD:ArgS, Arginyl-tRNA synthetase FT [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:CDD:Arg_tRNA_synt_N, Arginyl tRNA FT synthetase N terminal domain" FT /inference="protein motif:CDD:tRNA-synt_1d, tRNA FT synthetases class I (R)" FT /inference="protein motif:CDD:tRNA-synt_1d_C, DALR FT anticodon binding domain" FT /inference="protein motif:COG:COG0018 Arginyl-tRNA FT synthetase; J Translation, ribosomal structure and FT biogenesis" FT /inference="protein motif:FPrintScan:PR01038 TRNASYNTHARG FT InterPro:IPR001278 Arginyl-tRNA synthetase, class Ic FT GO:Molecular Function:arginine-tRNA ligase activity FT (GO:0004814), Molecular Function:ATP binding (GO:0005524), FT Biological Process:arginyl-tRNA aminoacylation FT (GO:0006420)" FT /inference="protein motif:Gene3D:G3D.1.20.1010.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.30.70.810 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.510.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11956 ARGINYL-TRNA FT SYNTHETASE InterPro:IPR001278 Arginyl-tRNA synthetase, FT class Ic GO:Molecular Function:arginine-tRNA ligase FT activity (GO:0004814), Molecular Function:ATP binding FT (GO:0005524), Biological Process:arginyl-tRNA FT aminoacylation (GO:0006420)" FT /inference="protein motif:HMMPfam:PF00750 tRNA-synt_1d FT InterPro:IPR001278 Arginyl-tRNA synthetase, class Ic FT GO:Molecular Function:arginine-tRNA ligase activity FT (GO:0004814), Molecular Function:ATP binding (GO:0005524), FT Biological Process:arginyl-tRNA aminoacylation FT (GO:0006420)" FT /inference="protein motif:HMMPfam:PF03485 Arg_tRNA_synt_N FT InterPro:IPR005148 Arginyl tRNA synthetase, N-terminal" FT /inference="protein motif:HMMPfam:PF05746 tRNA-synt_1d_C FT InterPro:IPR008909 DALR anticodon binding GO:Molecular FT Function:arginine-tRNA ligase activity (GO:0004814), FT Molecular Function:ATP binding (GO:0005524), Biological FT Process:arginyl-tRNA aminoacylation (GO:0006420)" FT /inference="protein motif:HMMTigr:TIGR00456 FT argS:arginyl-tRNA synthetase InterPro:IPR001278 FT Arginyl-tRNA synthetase, class Ic GO:Molecular FT Function:arginine-tRNA ligase activity (GO:0004814), FT Molecular Function:ATP binding (GO:0005524), Biological FT Process:arginyl-tRNA aminoacylation (GO:0006420)" FT /inference="protein motif:ScanRegExp:PS00178 FT AA_TRNA_LIGASE_I InterPro:IPR001412 Aminoacyl-tRNA FT synthetase, class I GO:Molecular Function:aminoacyl-tRNA FT ligase activity (GO:0004812), Molecular Function:ATP FT binding (GO:0005524), Biological Process:tRNA FT aminoacylation for protein translation (GO:0006418)" FT /inference="protein motif:superfamily:SSF47323 FT Anticodon-binding domain of a subclass of class I FT aminoacyl-tRNA synthetases InterPro:IPR009080 FT Aminoacyl-tRNA synthetase, class 1a, anticodon-binding" FT /inference="protein motif:superfamily:SSF52374 FT Nucleotidylyl transferase" FT /inference="protein motif:superfamily:SSF55190" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33199.1" FT /translation="MVYKEIRERARLSLKKALDEMLTEAGKKWEGEITFDDTPSLELGD FT FGTAVAFQLARVFRKAPKLIAEELVERIEKPEGIVEVKAVNGYINFYVDYSYFGRELVR FT EILGKGEAYGESELGKGRKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRRLGYKVE FT VQNYIDDLGVQFAQVLWGYLNMKEEFERIEAELREKGLKEDFIDHVMGLLYVEVNKRIE FT ENPEVDKEVRELMKKLEEGNNEIAEIGRKLAERVVKAQMLTTYRMGIAYDLLSWESDIM FT RSGIFEEAYRLIEANENFFWGREGKYKGAFVMDLRKLFPDMKNPFLVLKRSDGTATYTG FT KDIAYHLWKFGKVKADMLYKLWDKRENHETWTTAPDGEEMPGRFGRGDIVINVIGAEQR FT HPQMAIKYALQLLGFEDSAENFHHLAYEHVVRPEGKFSGRKGTWVGFTVDEVLNEAVQR FT ARELVEQKNPNLSEEEKDEIAEAVGVGAVRFNLVKYSPDKIITFRWDDVLNFEGESAPY FT IQYAHARCASILRKARESGVETEWEKLLEKADFSKLTLREKELIKLLAKFPEVIESAGR FT DIKPHLVPAYLNELASLFNKFYMDHPVLKAEDGIREERLLLVLAVKQVLRNGLELLGIE FT APEKM" FT gene 663487..664458 FT /locus_tag="TGAM_0697" FT /note="tg0697" FT CDS 663487..664458 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0697" FT /product="Lipoate-protein ligase A" FT /db_xref="GOA:C5A4N8" FT /db_xref="InterPro:IPR005107" FT /db_xref="InterPro:IPR019491" FT /db_xref="UniProtKB/TrEMBL:C5A4N8" FT /inference="protein motif:COG:COG0095 Lipoate-protein FT ligase A; H Coenzyme transport and metabolism" FT /protein_id="ACS33200.1" FT /translation="MVYEVLLQALLPQLCLNPLELLFHVEVAPENLGELHSKVVYVVLN FT FNLVAEPAHNPRHRVAQNRVPRVPHVEWLRGIDRGVLDDDLPALSKLALAVGFAFAKDF FT PDQLASEVGVVNVEVDVAVDRLNLDYALGLLNPLDELFRYELRGLPEDPRELKRHSRAK FT VAELEARCVVEGYLSFPLLSCLGEHLVECLLQRKPRPLPYLFIDHLHHRSHFNPTFKKF FT SRELTTGMGMKHHVGEHKAKKGLIRIEFDERDGIAEHVKITGDFFMHPEEAVHDLEKKL FT EGHKIEELESLIDEFFAMRLDVEMPYVNVEDFKIALKKALEG" FT gene 664479..665033 FT /locus_tag="TGAM_0699" FT /note="tg0699" FT CDS 664479..665033 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0699" FT /product="Conserved membrane protein" FT /note="Belongs to DUF95 family; 5 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR002798" FT /db_xref="UniProtKB/TrEMBL:C5A4N9" FT /inference="protein motif:CDD:DUF95, Integral membrane FT protein DUF95" FT /inference="protein motif:CDD:SpoIIM, Uncharacterized FT membrane protein [Function unknown]" FT /inference="protein motif:COG:COG1300 Uncharacterized FT membrane protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01944 DUF95 FT InterPro:IPR002798 Protein of unknown function DUF95, FT transmembrane" FT /protein_id="ACS33201.1" FT /translation="MRAKELAIGQLLRLAVGFVVSAFLGVLVAVVFPKTAANLFVEIGK FT SIAGKVGDREGFGAFLSIYTNNLTVATSAYALGIFFGIVPWIIVLVNGFILGLVLAVVV FT STGLISPVTAMLAVLPHGIFEIPAILLAAAAGILVYRGTLKKEGMEVVYASLKLYALSA FT VLLLVAAFIEAFITPKVAGIG" FT gene complement(665038..665706) FT /locus_tag="TGAM_0700" FT /note="tg0700" FT CDS complement(665038..665706) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0700" FT /product="Hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4P0" FT /protein_id="ACS33202.1" FT /translation="MKRWLALGISILVLLSVLVVTTASESTVLSELSGESQYGGSLIPN FT SSGWRSAPEDPQTVYIEIVAPNVRLKKALREALTNVTRAHNLKPVYVSGSIDDHDMKGR FT VVVVYLPHAFSRDGLLSRECGVSGILYYSYAGDAKTFVDIMMSRNTSKETKGTIKKPAL FT ELKFSSVRRLNEEHIMNQTVWVAYWWNLKARVGRLREGDPYKMVAREIAAHLDRFLENS FT " FT gene complement(665752..667011) FT /locus_tag="TGAM_0701" FT /note="tg0701" FT CDS complement(665752..667011) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0701" FT /product="Radical SAM protein, elongator protein FT 3/MiaB/NifB related" FT /db_xref="GOA:C5A4P1" FT /db_xref="InterPro:IPR002792" FT /db_xref="InterPro:IPR006638" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:C5A4P1" FT /inference="protein motif:CDD:COG0535, Predicted Fe-S FT oxidoreductases [General function prediction only]" FT /inference="protein motif:CDD:COG2100, Predicted Fe-S FT oxidoreductase [General function prediction only]" FT /inference="protein motif:CDD:Elp3, Elongator protein 3, FT MiaB family, Radical SAM; This superfamily contains MoaA, FT NifB, PqqE, coproporphyrinogen III oxidase, biotin synthase FT and MiaB families, and includes a representative in the FT eukaryotic elongator subunit, Elp-3" FT /inference="protein motif:CDD:MoaA, Molybdenum cofactor FT biosynthesis enzyme [Coenzyme metabolism]" FT /inference="protein motif:CDD:PflA, Pyruvate-formate FT lyase-activating enzyme [Posttranslational modification, FT protein turnover, chaperones]" FT /inference="protein motif:CDD:Radical_SAM, Radical SAM FT superfamily" FT /inference="protein motif:COG:COG2100 Predicted Fe-S FT oxidoreductase; R General function prediction only" FT /inference="protein motif:HMMPanther:PTHR11228 PUTATIVE FT MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A" FT /inference="protein motif:HMMPfam:PF04055 Radical_SAM FT InterPro:IPR007197 Radical SAM GO:Molecular FT Function:catalytic activity (GO:0003824), Molecular FT Function:iron ion binding (GO:0005506)" FT /inference="protein motif:HMMSmart:SM00729 no description FT InterPro:IPR006638 Elongator protein 3/MiaB/NifB" FT /inference="protein motif:ProfileScan:PS50926 TRAM FT InterPro:IPR002792 Deoxyribonuclease/rho motif-related FT TRAM" FT /inference="protein motif:superfamily:SSF51366 FT Ribulose-phoshate binding barrel InterPro:IPR011060 FT Ribulose-phosphate binding barrel" FT /inference="protein motif:superfamily:SSF52335 FT Methylglyoxal synthase-like" FT /protein_id="ACS33203.1" FT /translation="MIELRLPNSRFEDLGDAIRLIWRETLYADFPKRELERVIRRKYRV FT SPQITARNGTLIIDTDYKKVEGFIALYIQNNLGALLRNRYTKRKVLYIHEALDVPLLGY FT NAFGLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVAR FT IKGKGLEAHLDGQGEPLIYPFRVELVQALREHPNVSVISMQSNGTLLTDKLVEELAEAG FT LDRVNLSIHSLDPEKAKMLMGMKSYDLDHVLEMAEALVNAGIDVLIAPVIIFGINDDEA FT EAFIEFARKIGAGKRWPALGFQNYVPYKFGRNPVIAKPVPFKEFYAWLRRLEEKTGMKP FT LVLKPSHFGMEKREFIPLAFRPGEIVKAEVVLPGRIEGEMLAKARNRLIEVVGTRAEVG FT DRIRVRIVRTRHGIYIGREV" FT gene 667156..667656 FT /locus_tag="TGAM_0702" FT /note="tg0702" FT CDS 667156..667656 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0702" FT /product="Regulator of amino acid metabolism, putative, FT containing ACT domain" FT /db_xref="GOA:C5A4P2" FT /db_xref="InterPro:IPR002912" FT /db_xref="InterPro:IPR014424" FT /db_xref="UniProtKB/TrEMBL:C5A4P2" FT /inference="protein motif:CDD:COG2150, Predicted regulator FT of amino acid metabolism, contains ACT domain [General FT function prediction only]" FT /inference="protein motif:COG:COG2150 Predicted regulator FT of amino acid metabolism, contains ACT domain; R General FT function prediction only" FT /inference="protein motif:Gene3D:G3D.3.30.70.260 no FT description" FT /inference="protein motif:HMMPfam:PF01842 ACT FT InterPro:IPR002912 Amino acid-binding ACT GO:Biological FT Process:metabolism (GO:0008152), Molecular Function:amino FT acid binding (GO:0016597)" FT /inference="protein motif:superfamily:SSF55021 Regulatory FT domain in the aminoacid metabolism" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33204.1" FT /translation="MWGKIEHYFDEYPVRKLIAKTLLKYGLRVSDDLKIKAGDIEVPYT FT KIAKALDVDRRVVKETVSMILKIPDLREIYTNLEPTVHMKHVGRHVGYGVIEIEPEPRA FT VGILAKIAQKIADRGINIVQVVAEDPELYPEATLTIITEKPIPGDLINELSKLEGVKRI FT SIY" FT gene 667855..668388 FT /gene="mbxA" FT /locus_tag="TGAM_0703" FT /note="tg0703" FT CDS 667855..668388 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxA" FT /locus_tag="TGAM_0703" FT /product="membrane bound oxidoreductase, MbxA subunit FT (MbxA)" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4P3" FT /db_xref="InterPro:IPR002758" FT /db_xref="UniProtKB/TrEMBL:C5A4P3" FT /inference="protein motif:BlastProDom:PD012569 FT Q9V0T5_PYRAB_Q9V0T5; InterPro:IPR002758 Predicted cation FT antiporter GO:Biological Process:cation transport FT (GO:0006812), Molecular Function:cation transporter FT activity (GO:0008324), Cellular Component:integral to FT membrane (GO:0016021)" FT /inference="protein motif:CDD:MnhE, Multisubunit Na+/H+ FT antiporter, MnhE subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:MNHE, Na+/H+ ion antiporter FT subunit" FT /inference="protein motif:COG:COG1863 Multisubunit Na+/H+ FT antiporter, MnhE subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF01899 MNHE FT InterPro:IPR002758 Predicted cation antiporter FT GO:Biological Process:cation transport (GO:0006812), FT Molecular Function:cation transporter activity FT (GO:0008324), Cellular Component:integral to membrane FT (GO:0016021)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33205.1" FT /translation="MEEAGKISRYLYTVIVLFLIWLFLTASTDPQELVMGVIFSLLIAA FT FAYPIFTTRGLANLHPKRVAYAIAYIPYFLWAMIMANLDVAYRVLHPKRPIRPGIVHCK FT TVLKTNPGKLALANSITLTPGTITLDVDDDNYFIHWIWVPDEVLRAESDEEHVERASSN FT ITAPFEKFLKVIFG" FT gene 668385..668639 FT /gene="mbxB" FT /locus_tag="TGAM_0704" FT /note="tg0704" FT CDS 668385..668639 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxB" FT /locus_tag="TGAM_0704" FT /product="membrane bound oxidoreductase, MbxB subunit FT (MbxB)" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4P4" FT /db_xref="InterPro:IPR007208" FT /db_xref="UniProtKB/TrEMBL:C5A4P4" FT /inference="protein motif:COG:COG2212 Multisubunit Na+/H+ FT antiporter, MnhF subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF04066 MrpF_PhaF FT InterPro:IPR007208 Multiple resistance and pH regulation FT protein F GO:Biological Process:ion transport (GO:0006811), FT Molecular Function:ion transporter activity (GO:0015075), FT Cellular Component:integral to membrane (GO:0016021)" FT /protein_id="ACS33206.1" FT /translation="MIGINIYLILIAIATLLSMYRVFRGPTTVDRLVAVDIMTTITTGL FT MVLFALYYKRMIFLDVALVYAVLAFGGVIAFARYMEGGL" FT gene 668636..669031 FT /gene="mbxC" FT /locus_tag="TGAM_0705" FT /note="tg0705" FT CDS 668636..669031 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxC" FT /locus_tag="TGAM_0705" FT /product="membrane bound oxidoreductase, MbxC subunit FT (MbxC)" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4P5" FT /db_xref="InterPro:IPR005133" FT /db_xref="UniProtKB/TrEMBL:C5A4P5" FT /inference="protein motif:CDD:MnhG, Multisubunit Na+/H+ FT antiporter, MnhG subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:PhaG_MnhG_YufB, Na+/H+ FT antiporter subunit" FT /inference="protein motif:COG:COG1320 Multisubunit Na+/H+ FT antiporter, MnhG subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF03334 PhaG_MnhG_YufB FT InterPro:IPR005133 Na+/H+ antiporter subunit" FT /inference="protein motif:HMMTigr:TIGR01300 FT CPA3_mnhG_phaG:monovalent cation/prot InterPro:IPR005133 FT Na+/H+ antiporter subunit" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33207.1" FT /translation="MNVLAAIGEILVFIGTFFYFLSALGLIRMPDVYNRMQTSTKSATL FT GSLGVMIGVGLWALGSDFGSVAWLTKTVVIATFLLLTNPISAHALIRAAYKRGIPLWHG FT SVVDKYHEYIESKAEKAESVEGEGDAE" FT gene 669028..669312 FT /gene="mbxD" FT /locus_tag="TGAM_0706" FT /note="tg0706" FT CDS 669028..669312 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxD" FT /locus_tag="TGAM_0706" FT /product="membrane bound oxidoreductase, MbxD subunit FT (MbxD)" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4P6" FT /inference="protein motif:CDD:COG1563, Predicted subunit of FT the Multisubunit Na+/H+ antiporter [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:COG:COG1563 Predicted subunit of FT the Multisubunit Na+/H+ antiporter; P Inorganic ion FT transport and metabolism" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33208.1" FT /translation="MNCIACVEYIIVALMILSAVLAVEWRDLLAATVGMAAVSLFASIL FT FFMLQAPDVAMTEAAIGAALSGAVFIFAIKRTQRFETEEEEKPGWWVRW" FT gene 669309..670022 FT /gene="mbxF" FT /locus_tag="TGAM_0707" FT /note="tg0707" FT CDS 669309..670022 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxF" FT /locus_tag="TGAM_0707" FT /product="membrane bound oxidoreductase, MbxF subunit FT (MbxF)" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR007182" FT /db_xref="UniProtKB/TrEMBL:C5A4P7" FT /inference="protein motif:CDD:MnhB, Domain related to MnhB FT subunit of Na+/H+ antiporter" FT /inference="protein motif:CDD:MnhB, Multisubunit Na+/H+ FT antiporter, MnhB subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:COG:COG2111 Multisubunit Na+/H+ FT antiporter, MnhB subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF04039 MnhB FT InterPro:IPR007182 Na+/H+ antiporter MnhB subunit-related FT protein" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33209.1" FT /translation="MNMLKRALAIITLLIIGYWLAQGLAGVPFGQDKMIVGRYYLENVK FT EQTGAVNAVTAIVVNYRGFDTLGEVTVLFIASTGVGALLWRKKKKRTARAEGSVVLKTG FT TELLFPFVVLFGAYIFIHGHLTPGGGFPGGATIATAFLLLYMAFINYEIPHRAFEKTEG FT LAGMGYVLVGLIGLAIGGYFLFDWIWQTWNWGHDNIGRLFSGGFIPIIYTLIGIKVGTE FT LSGIIDNMLKEGVSE" FT gene 670019..670375 FT /gene="mbxG" FT /locus_tag="TGAM_0708" FT /note="tg0708" FT CDS 670019..670375 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxG" FT /locus_tag="TGAM_0708" FT /product="membrane bound oxidoreductase, MbxG subunit FT (MbxG)" FT /EC_number="1.6.5.3" FT /note="3 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4P8" FT /db_xref="InterPro:IPR001133" FT /db_xref="UniProtKB/TrEMBL:C5A4P8" FT /inference="protein motif:BlastProDom:PD006097 FT Q8U0Y3_PYRFU_Q8U0Y3; InterPro:IPR006672 Protein of unknown FT function DUF67 GO:Molecular Function:molecular function FT unknown (GO:0005554), Cellular Component:integral to FT membrane (GO:0016021)" FT /inference="protein motif:CDD:MnhC, Multisubunit Na+/H+ FT antiporter, MnhC subunit [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:COG:COG1006 Multisubunit Na+/H+ FT antiporter, MnhC subunit; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF00420 Oxidored_q2 FT InterPro:IPR001133 NADH-ubiquinone oxidoreductase, chain 4L FT GO:Biological Process:mitochondrial electron transport, FT NADH to ubiquinone (GO:0006120), Molecular Function:NADH FT dehydrogenase (ubiquinone) activity (GO:0008137)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33210.1" FT /translation="MNVPDISVYYFGAISLVLIGLYAVLVKKNVLKILVGLSIMETGVN FT LLLISIGYISGRSAPILSEGVTASRAVDPIPQALVLTAIVIGVATTAMALSVAIILYEK FT YGTLNVEEIRRLRG" FT gene 670372..671859 FT /gene="mbxH1" FT /locus_tag="TGAM_0709" FT /note="tg0709" FT CDS 670372..671859 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxH1" FT /locus_tag="TGAM_0709" FT /product="membrane bound oxidoreductase, MbxH subunit FT (MbxH1)" FT /EC_number="1.6.5.3" FT /note="14 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4P9" FT /db_xref="InterPro:IPR001750" FT /db_xref="UniProtKB/TrEMBL:C5A4P9" FT /inference="protein motif:CDD:HyfB, Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit FT [Energy production and conversion / Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:NuoL, NADH:ubiquinone FT oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ FT antiporter, MnhA subunit [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NuoM, NADH:ubiquinone FT oxidoreductase subunit 4 (chain M) [Energy production and FT conversion]" FT /inference="protein motif:CDD:NuoN, NADH:ubiquinone FT oxidoreductase subunit 2 (chain N) [Energy production and FT conversion]" FT /inference="protein motif:CDD:Oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains" FT /inference="protein motif:COG:COG0651 Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; C FT Energy production and conversion" FT /inference="protein motif:FPrintScan:PR01434 NADHDHGNASE5 FT InterPro:IPR003916 NADH-ubiquinone oxidoreductase, chain 5 FT GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:HMMPanther:PTHR19377 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00361 Oxidored_q1 FT InterPro:IPR001750 NADH/Ubiquinone/plastoquinone (complex FT I) GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33211.1" FT /translation="MNAQYASLLIAVPLISAFFVPLIKGFGKRTVKYYLMLVTLVQTAI FT AGAVFVNVYRTGEPMIVMAGGWKPPVGINLYVGPFAALFVLIVAIMSFFMAVFSLKAVE FT TEPIDKYAMLFLLLMLGSTGMIATGDIFNLFVFMEITSITAYALTAYNKTGEAAEASLK FT YMVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGGINPTVAQIGLALLIFGLAVEAE FT LFPLNAWAPDAYQAAPHPITAMFSAFVVKAGLYAAARLLYIMQNASGWGSVLKMVVIMA FT ALTVFVAEFSALRQRDVKRMIAYSSISQVGMIAFALALGTQAGVEAGVFHMINHAIVKA FT LLFLAVGYVGITLGGTGIEKFSGLGRRMPLTAFVITVGSLAAVGIPLFNIFWSKIRILI FT AGVEAGYTWGVALILGASVVEAVYYIRLIHTMWFGEGEGRIRENLAIGTIALFLVLLIL FT FIGLYPNYFWTVSQKAGQDIFNVVDYVKNVPLMGVGS" FT gene 671856..673709 FT /gene="mbxH2" FT /locus_tag="TGAM_0710" FT /note="tg0710" FT CDS 671856..673709 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxH2" FT /locus_tag="TGAM_0710" FT /product="membrane bound oxidoreductase, MbxH' subunit FT (MbxH2)" FT /EC_number="1.6.5.3" FT /note="16 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4Q0" FT /db_xref="InterPro:IPR001750" FT /db_xref="UniProtKB/TrEMBL:C5A4Q0" FT /inference="protein motif:CDD:HyfB, Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit FT [Energy production and conversion / Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:NuoL, NADH:ubiquinone FT oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ FT antiporter, MnhA subunit [Energy production and conversion FT / Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:NuoM, NADH:ubiquinone FT oxidoreductase subunit 4 (chain M) [Energy production and FT conversion]" FT /inference="protein motif:CDD:NuoN, NADH:ubiquinone FT oxidoreductase subunit 2 (chain N) [Energy production and FT conversion]" FT /inference="protein motif:CDD:Oxidored_q1, FT NADH-Ubiquinone/plastoquinone (complex I), various chains" FT /inference="protein motif:COG:COG0651 Formate hydrogenlyase FT subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; C FT Energy production and conversion" FT /inference="protein motif:HMMPanther:PTHR19377 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR19377:SF14 NADH FT DEHYDROGENASE I SUBUNIT M" FT /inference="protein motif:HMMPfam:PF00361 Oxidored_q1 FT InterPro:IPR001750 NADH/Ubiquinone/plastoquinone (complex FT I) GO:Molecular Function:NADH dehydrogenase (ubiquinone) FT activity (GO:0008137), Biological Process:ATP synthesis FT coupled electron transport (GO:0042773)" FT /inference="protein motif:superfamily:SSF81601 Protein FT serine/threonine phosphatase 2C, C-terminal domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33212.1" FT /translation="MTFVDYAIPLLLFIPAVSGVLAWLFDRDIVREIFGLIGGLSPLVI FT IAITYGKLGDGIKWTVDTGVFKLFFQLEHMSWYLAAVAAVVAAAMAFGMVSTSRSGYEW FT MFALFSVSGLLGVFLSGDFAGFFLFWELMTFASFMMVLRYNKRASLKYFVLSIIGAYAM FT LLAIAILYAKTGTLEFQSLRRMVVYAAYGMVPLTKTDMVLVYALFLVAFGVKAGTWPLH FT VWAPDAYSETNQSYTTFFSGALSKAGAYGFVLMFILLGVKLYTDLGTFRGHPLFTYILA FT WLGAITVVVAGFLAVLQEDLRKLLAYSSVSQVGYIVLALGVGSGIGFTGAFFHILSHAV FT FKGLFWLITAALILRTGKTRFEDFGGLAEKMPVTFAMALIAVLSLAGIPPMAGFASKWL FT IYEAAISAHMPLVAGAIFLGSAIAFAYVVRFLYAIWFGQRPSDLDDVEEAPLPLLVGMT FT ILAIPNVVFGIAPGLVVRFLNKFINTGVAVNSYYSISTGVGTYNALSVALILVVGLAIA FT GLIYIYGARARRIPLTNTYQSGNPVTEDYNLSMRRNFYRPLAEALEFWLKYSFDRFYAR FT VAKIAEDFADWLREGFYNGNVQAYSWYLAIVLLILALWGVL" FT gene 673710..674603 FT /gene="mbxM" FT /locus_tag="TGAM_0711" FT /note="tg0711" FT CDS 673710..674603 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxM" FT /locus_tag="TGAM_0711" FT /product="membrane bound oxidoreductase, MbxM subunit FT (MbxM)" FT /EC_number="1.6.5.3" FT /note="7 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4Q1" FT /db_xref="InterPro:IPR001694" FT /db_xref="UniProtKB/TrEMBL:C5A4Q1" FT /inference="protein motif:CDD:HyfC, Formate hydrogenlyase FT subunit 4 [Energy production and conversion]" FT /inference="protein motif:CDD:NADHdh, NADH dehydrogenase" FT /inference="protein motif:CDD:NuoH, NADH:ubiquinone FT oxidoreductase subunit 1 (chain H) [Energy production and FT conversion]" FT /inference="protein motif:COG:COG0650 Formate hydrogenlyase FT subunit 4; C Energy production and conversion" FT /inference="protein motif:HMMPanther:PTHR11432 NADH FT DEHYDROGENASE SUBUNIT 1 InterPro:IPR001694 FT Respiratory-chain NADH dehydrogenase, subunit 1 FT GO:Biological Process:electron transport (GO:0006118), FT Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:HMMPfam:PF00146 NADHdh FT InterPro:IPR001694 Respiratory-chain NADH dehydrogenase, FT subunit 1 GO:Biological Process:electron transport FT (GO:0006118), Cellular Component:membrane (GO:0016020)" FT /inference="protein motif:superfamily:SSF81514 Subunit X FT (nonheme 7 kDa protein) of cytochrome bc1 complex FT (Ubiquinol-cytochrome c reductase)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33213.1" FT /translation="MFDWKLILEAIGMLIYATFMGFIFMGIERKAMARIQRRVGPPIYQ FT PIIDTLKLLGKKESVSHGLIYDFGPVFALGASITALLFLPIANFQLFSSNADLIVVAYL FT LEIPMLGIMLGAMSSGNPYSAVGVQRGLLTMVAMQLPYGLALIALIQHWGTFKLSEIVA FT LQELHGWSITVPALLIAMIIFDIVFQAMLGLEPFDIVTAPAEISMGPMVEYGGKHAALL FT FTQHAVQLFAETAFFAILFLGGASNLLELLVKQIAVLFIAIFIASIYPRFTIDQAAKFF FT WKWPTILGIIAVLLTM" FT gene 674614..675198 FT /gene="mbxJ" FT /locus_tag="TGAM_0712" FT /note="tg0712" FT CDS 674614..675198 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxJ" FT /locus_tag="TGAM_0712" FT /product="membrane bound oxidoreductase, MbxJ subunit FT (MbxJ)" FT /EC_number="1.6.5.3" FT /db_xref="GOA:C5A4Q2" FT /db_xref="InterPro:IPR006137" FT /db_xref="InterPro:IPR006138" FT /db_xref="InterPro:IPR014406" FT /db_xref="UniProtKB/TrEMBL:C5A4Q2" FT /inference="protein motif:CDD:COG3260, Ni,Fe-hydrogenase FT III small subunit [Energy production and conversion]" FT /inference="protein motif:CDD:NuoB, NADH:ubiquinone FT oxidoreductase 20 kD subunit and related Fe-S FT oxidoreductases [Energy production and conversion]" FT /inference="protein motif:CDD:Oxidored_q6, NADH ubiquinone FT oxidoreductase, 20 Kd subunit" FT /inference="protein motif:COG:COG0377 NADH:ubiquinone FT oxidoreductase 20 kD subunit and related Fe-S FT oxidoreductases; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.700 no FT description" FT /inference="protein motif:HMMPanther:PTHR11995 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR11995:SF7 NADH FT DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF01058 Oxidored_q6 FT InterPro:IPR006137 NADH ubiquinone oxidoreductase, 20 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:HMMPIR:PIRSF002913 FT [NiFe]-hydrogenase-3-type complex, small FT subunit/NADH:quinone oxidoreductase (complex I), subunit FT PSST/NdhK/NuoB" FT /inference="protein motif:HMMTigr:TIGR01957 FT nuoB_fam:NADH-quinone oxidoreductase, B sub FT InterPro:IPR006138 NADH dehydrogenase (ubiquinone), 20 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:superfamily:SSF56770 Nickel-iron FT hydrogenase, small subunit" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33214.1" FT /translation="MSEKDGFISYELQEFKLFEPLFRWARKKSLWIVAFCTGCGGIEMP FT PLATARYDFERFGIMPNPAPRMADLFLITGYVTPKTLKRIIITYEMMQDPKYVLAHGSC FT PINGGVYWDSYNVVKQLDKYIPIDVAIAGCMPRPEAVMDGIMEIMRKIENGEADGWKRY FT RENYEWYRKNQDELFGEGWREKDAKRWLAWL" FT gene 675234..675785 FT /gene="mbxK" FT /locus_tag="TGAM_0713" FT /note="tg0713" FT CDS 675234..675785 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxK" FT /locus_tag="TGAM_0713" FT /product="membrane bound oxidoreductase, MbxK subunit FT (MbxK)" FT /EC_number="1.6.5.3" FT /db_xref="GOA:C5A4Q3" FT /db_xref="InterPro:IPR001268" FT /db_xref="UniProtKB/TrEMBL:C5A4Q3" FT /inference="protein motif:BlastProDom:PD001581 FT Q9V0S6_PYRAB_Q9V0S6; InterPro:IPR001268 NADH dehydrogenase FT (ubiquinone), 30 kDa subunit GO:Biological FT Process:mitochondrial electron transport, NADH to FT ubiquinone (GO:0006120), Molecular Function:NADH FT dehydrogenase (ubiquinone) activity (GO:0008137)" FT /inference="protein motif:CDD:Complex1_30kDa, FT Respiratory-chain NADH dehydrogenase, 30 Kd subunit" FT /inference="protein motif:COG:COG0852 NADH:ubiquinone FT oxidoreductase 27 kD subunit; C Energy production and FT conversion" FT /inference="protein motif:HMMPanther:PTHR10884 FT NADH-UBIQUINONE OXIDOREDUCTASE-RELATED" FT /inference="protein motif:HMMPfam:PF00329 Complex1_30kDa FT InterPro:IPR001268 NADH dehydrogenase (ubiquinone), 30 kDa FT subunit GO:Biological Process:mitochondrial electron FT transport, NADH to ubiquinone (GO:0006120), Molecular FT Function:NADH dehydrogenase (ubiquinone) activity FT (GO:0008137)" FT /inference="protein motif:superfamily:SSF50203 Bacterial FT enterotoxins InterPro:IPR008992 Bacterial enterotoxin" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33215.1" FT /translation="MKAQEVPEEKPELPNTKEGNLVRELLEKAPYAEGKVRRERRIEFK FT VPAERIHEFLELASEKFEMLMQISVVDWLKQGEFELVYQLWSVSESVHAFVKTRVPRDS FT AEVPTVMDIWPVAETYEREAHEFFGIIFKGNPRLGPFILEPREYEKHPLRKDFNTLSYV FT KTIYGEDFDRYDESKTNYVI" FT gene 675796..676980 FT /gene="mbxL" FT /locus_tag="TGAM_0714" FT /note="tg0714" FT CDS 675796..676980 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxL" FT /locus_tag="TGAM_0714" FT /product="membrane bound oxidoreductase, MbxL subunit FT (MbxL)" FT /EC_number="1.6.5.3" FT /db_xref="GOA:C5A4Q4" FT /db_xref="InterPro:IPR001135" FT /db_xref="InterPro:IPR014029" FT /db_xref="UniProtKB/TrEMBL:C5A4Q4" FT /inference="protein motif:CDD:Complex1_49kDa, FT Respiratory-chain NADH dehydrogenase, 49 Kd subunit" FT /inference="protein motif:CDD:HycE, Ni,Fe-hydrogenase III FT large subunit [Energy production and conversion]" FT /inference="protein motif:CDD:NuoD, NADH:ubiquinone FT oxidoreductase 49 kD subunit 7 [Energy production and FT conversion]" FT /inference="protein motif:COG:COG0649 NADH:ubiquinone FT oxidoreductase 49 kD subunit 7; C Energy production and FT conversion" FT /inference="protein motif:Gene3D:G3D.1.10.645.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR11993 NADH FT DEHYDROGNEASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11993:SF3 NADH FT DEHYDROGENASE-RELATED InterPro:IPR001135 NADH-ubiquinone FT oxidoreductase, chain 49kDa GO:Molecular Function:electron FT transporter activity (GO:0005489), Biological FT Process:electron transport (GO:0006118)" FT /inference="protein motif:HMMPfam:PF00346 Complex1_49kDa FT InterPro:IPR001135 NADH-ubiquinone oxidoreductase, chain FT 49kDa GO:Molecular Function:electron transporter activity FT (GO:0005489), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:HMMPIR:PIRSF000230 FT [NiFe]-hydrogenase-3-type complex, large FT subunit/NADH:quinone oxidoreductase (complex I), subunit FT 49K/NdhH/NuoD" FT /inference="protein motif:ScanRegExp:PS00535 COMPLEX1_49K FT InterPro:IPR001135 NADH-ubiquinone oxidoreductase, chain FT 49kDa GO:Molecular Function:electron transporter activity FT (GO:0005489), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:superfamily:SSF56762 Nickel-iron FT hydrogenase, large subunit" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33216.1" FT /translation="MANLEVPKELREEARKHDMYLTPIAKDTYELFFGPQHMATENFSI FT ILKMDGNRVERAIVNPGFLHRGFEKLAEGRPYFTNIALLLRICVPESDVPENIYSMAVD FT EIVGWEVPERAIWIRTTVLEMARLSAWMFWIMGFGNEIGLYTAGQWAAAYRERLMRLFE FT ELTGGRVYHIYTVPGGVRRDIPGDRWLRQLRDTVEYIKSKLKDFDEILFDNYITFERTE FT GVGVMDKKFALKHAVTGPNLRAVGVPYDVRKDDPYYLYPELDFEVPVLKEGDSLARVLV FT RRYEIEQDLYILEQLLDMGPPSGPYMVQDPKLKNLPRFKVPAGDAYAHVESTKGDFGAY FT VVSDGTHKPYRVHVRGPSQSHGVTVLEELLKGARLADVPVILKTLDNCPPDIDR" FT gene 676977..677693 FT /gene="mbxN" FT /locus_tag="TGAM_0715" FT /note="tg0715" FT CDS 676977..677693 FT /codon_start=1 FT /transl_table=11 FT /gene="mbxN" FT /locus_tag="TGAM_0715" FT /product="membrane bound oxidoreductase, MbxN subunit FT (MbxN)" FT /db_xref="GOA:C5A4Q5" FT /db_xref="InterPro:IPR001450" FT /db_xref="InterPro:IPR012285" FT /db_xref="InterPro:IPR017896" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:C5A4Q5" FT /inference="protein motif:CDD:NuoI, Formate hydrogenlyase FT subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit FT (chain I) [Energy production and conversion]" FT /inference="protein motif:COG:COG1143 Formate hydrogenlyase FT subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit FT (chain I); C Energy production and conversion" FT /inference="protein motif:FPrintScan:PR00353 4FE4SFRDOXIN FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:Gene3D:G3D.3.30.70.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR10849 FT NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 9-RELATED" FT /inference="protein motif:HMMPanther:PTHR10849:SF3 FT NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 9" FT /inference="protein motif:HMMPfam:PF00037 Fer4 FT InterPro:IPR001450 4Fe-4S ferredoxin, iron-sulfur binding FT GO:Molecular Function:electron transporter activity FT (GO:0005489), Molecular Function:iron ion binding FT (GO:0005506), Biological Process:electron transport FT (GO:0006118)" FT /inference="protein motif:ScanRegExp:PS00198 FT 4FE4S_FERREDOXIN InterPro:IPR001450 4Fe-4S ferredoxin, FT iron-sulfur binding GO:Molecular Function:electron FT transporter activity (GO:0005489), Molecular Function:iron FT ion binding (GO:0005506), Biological Process:electron FT transport (GO:0006118)" FT /inference="protein motif:superfamily:SSF54862 4Fe-4S FT ferredoxins" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33217.1" FT /translation="MMTMARVVGEEKVKIKKSFVKPWMGIKYLFKKPVTIKIPFEKIEP FT APKYRGFHTLDWKKCVGCNFCGQICPARAIEMTWLEVDGKMEKRPHPKIDYGRCTFCQF FT CVDVCPTGALGFSEAYLLTTDGTEDALELFNWVPIHPDKVRELNEKFGDYRFPVVKIEK FT KADGTYRYHLRDGEVIEFKIVGYGIRPPKRPTPAKPAAKATGKKETAKPAEKKESKPAE FT KKDETKQAEKKEGASS" FT gene complement(677780..679360) FT /locus_tag="TGAM_0716" FT /note="tg0716" FT CDS complement(677780..679360) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0716" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4Q6" FT /db_xref="InterPro:IPR003344" FT /db_xref="InterPro:IPR008969" FT /db_xref="InterPro:IPR014766" FT /db_xref="UniProtKB/TrEMBL:C5A4Q6" FT /inference="protein motif:Gene3D:G3D.2.60.40.920 no FT description" FT /inference="protein motif:HMMPfam:PF02369 Big_1 FT InterPro:IPR003344 Bacterial Ig-like, group 1" FT /inference="protein motif:superfamily:SSF49373 FT Invasin/intimin cell-adhesion fragments InterPro:IPR008964 FT Invasin/intimin cell-adhesion" FT /protein_id="ACS33218.1" FT /translation="MKVKTLVPLVVLIASLILIDHVAASVSFDVSPVKETMSAPPGAII FT SVPVRVTNTGDEPLGNLTLSLIWNMENGLYVVNKTVYVGVNESRVFDLTLKVPELPSGY FT YNVTVRGTLGNVSVEKKLVLRVEKEVLYSLSIDVGERYIYGNDVRIGFSLVSHSNDRII FT GPIWMKVYRNGTIVAEKAEITYLDPGERWNYTLVLNRPKIGIYSVTLSANMSGVYRKVE FT KTFVVYRRRFTYRAWYSDGELKVQVRLINGSPVKGIEVTVNGLKLKTDENGLVKYPTTS FT PGLYEIELNLDGVVEKTALYVGRLFINYEVRGNTLELRVLDSSGNPVPNVTLSIAGPKG FT EYQAVTDGKGKASLSLTALGYGTISITASAENYVGSSLTIAVPSPSPTTTTTTHRTTTS FT STTPSPTTTTESTGSSSTAQTGPPSKGGGISWSLLGSVILFLAVFGGSIYLSFLRPHLI FT EEELGKYYFVKLRAPRIIPIRNFRWEKGMNAVEVRATKGNAKIEGSKVVWTIDELEPGE FT EAILQVVLG" FT gene complement(679350..679766) FT /gene="hjc" FT /locus_tag="TGAM_0717" FT /note="tg0717" FT CDS complement(679350..679766) FT /codon_start=1 FT /transl_table=11 FT /gene="hjc" FT /locus_tag="TGAM_0717" FT /product="Archaeal holliday junction resolvase (Hjc)" FT /db_xref="GOA:C5A4Q7" FT /db_xref="InterPro:IPR002732" FT /db_xref="InterPro:IPR011335" FT /db_xref="InterPro:IPR011856" FT /db_xref="InterPro:IPR014428" FT /db_xref="UniProtKB/TrEMBL:C5A4Q7" FT /inference="protein motif:BlastProDom:PD015874 FT Q9V0H1_PYRAB_Q9V0H1; InterPro:IPR002732 Archaeal holliday FT junction resolvase" FT /inference="protein motif:CDD:archeal_HJR, Holliday FT junction resolvases (HJRs) are endonucleases that FT specifically resolve Holliday junction DNA intermediates FT during homologous recombination" FT /inference="protein motif:CDD:COG1591, Holliday junction FT resolvase - archaeal type [DNA replication, recombination, FT and repair]" FT /inference="protein motif:CDD:Hjc, Archaeal holliday FT junction resolvase (hjc)" FT /inference="protein motif:COG:COG1591 Holliday junction FT resolvase - archaeal type; L Replication, recombination and FT repair" FT /inference="protein motif:HMMPfam:PF01870 Hjc FT InterPro:IPR002732 Archaeal holliday junction resolvase" FT /inference="protein motif:superfamily:SSF52980 Restriction FT endonuclease-like" FT /protein_id="ACS33219.1" FT /translation="MRYRRGASAERELIHRLEELGFAVVRSAGSKKVDVIAGNGRLYLC FT IEVKSTKGRRIYLSKEDLEKLLSFSRMFGGKPYVAVKFIGREWRFFPAEEITKRGAGRS FT YRIDYTDAGMSLEEVVGRQKSLLDLMKPGGGNEG" FT gene 679863..680387 FT /locus_tag="TGAM_0718" FT /note="tg0718" FT CDS 679863..680387 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0718" FT /product="Carbonic anhydrase/acetyltransferase, containing FT bacterial transferase hexapeptide repeat" FT /db_xref="GOA:C5A4Q8" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR011004" FT /db_xref="UniProtKB/TrEMBL:C5A4Q8" FT /inference="protein motif:CDD:PaaY, Carbonic FT anhydrases/acetyltransferases, isoleucine patch superfamily FT [General function prediction only]" FT /inference="protein motif:COG:COG0663 Carbonic FT anhydrases/acetyltransferases, isoleucine patch FT superfamily; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.2.160.10.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR13061 DYNACTIN FT SUBUNIT P25" FT /inference="protein motif:HMMPfam:PF00132 Hexapep FT InterPro:IPR001451 Bacterial transferase hexapeptide FT repeat" FT /inference="protein motif:superfamily:SSF51161 Trimeric FT LpxA-like enzymes InterPro:IPR011004 Trimeric LpxA-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33220.1" FT /translation="MAIYELEGKKPKIHPTAFVDESASIIGDVVLEEKTSVWPSAVLRG FT DIEQIYIGCCSNVQDNVSIHTSHNQPTIVGKYVTIGHNAVVHGATIDDYVIIGMGAVIL FT DGVKIGKHVVIGAGALVPPGKEIPDYSLVIGVPGKVVRQLTEEEIEWTKKNAEIYMELA FT EKHLKSRKRIE" FT gene 680393..681187 FT /gene="uppS" FT /locus_tag="TGAM_0719" FT /note="tg0719" FT CDS 680393..681187 FT /codon_start=1 FT /transl_table=11 FT /gene="uppS" FT /locus_tag="TGAM_0719" FT /product="Undecaprenyl pyrophosphate synthetase FT (Di-trans-poly-cis-decaprenylcistransferase) (uppS)" FT /EC_number="2.5.1.31" FT /db_xref="GOA:C5A4Q9" FT /db_xref="InterPro:IPR001441" FT /db_xref="InterPro:IPR018520" FT /db_xref="UniProtKB/TrEMBL:C5A4Q9" FT /inference="protein motif:BlastProDom:PD003461 FT UPPS_PYRHO_O59258; InterPro:IPR001441 FT Di-trans-poly-cis-decaprenylcistransferase GO:Biological FT Process:metabolism (GO:0008152), Molecular FT Function:transferase activity (GO:0016740)" FT /inference="protein motif:CDD:CIS_IPPS, Cis (Z)-Isoprenyl FT Diphosphate Synthases (cis-IPPS)" FT /inference="protein motif:CDD:UppS, Undecaprenyl FT pyrophosphate synthase [Lipid metabolism]" FT /inference="protein motif:CDD:UPP_synthetase, Putative FT undecaprenyl diphosphate synthase" FT /inference="protein motif:COG:COG0020 Undecaprenyl FT pyrophosphate synthase; I Lipid transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.1180.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10291 UNDECAPRENYL FT PYROPHOSPHATE SYNTHETASE InterPro:IPR001441 FT Di-trans-poly-cis-decaprenylcistransferase GO:Biological FT Process:metabolism (GO:0008152), Molecular FT Function:transferase activity (GO:0016740)" FT /inference="protein motif:HMMPfam:PF01255 Prenyltransf FT InterPro:IPR001441 FT Di-trans-poly-cis-decaprenylcistransferase GO:Biological FT Process:metabolism (GO:0008152), Molecular FT Function:transferase activity (GO:0016740)" FT /inference="protein motif:HMMTigr:TIGR00055 FT uppS:undecaprenyl diphosphate synthase InterPro:IPR001441 FT Di-trans-poly-cis-decaprenylcistransferase GO:Biological FT Process:metabolism (GO:0008152), Molecular FT Function:transferase activity (GO:0016740)" FT /inference="protein motif:ScanRegExp:PS01066 UPP_SYNTHETASE FT InterPro:IPR001441 FT Di-trans-poly-cis-decaprenylcistransferase GO:Biological FT Process:metabolism (GO:0008152), Molecular FT Function:transferase activity (GO:0016740)" FT /inference="protein motif:superfamily:SSF64005 Undecaprenyl FT diphosphate synthase" FT /protein_id="ACS33221.1" FT /translation="MIYRLLSHVPHILFRPVYDFYERYLFEKVKSGNMPKHVAIIMDGN FT RRWARKLEKPPWYGHYFGSRKLEEILEWCRELGIRTLTVYAFSTENFKRSPEEVNALMN FT LFERKFKELVNDERIHRHGVRVNVIGRKELLPENVRKAIEEAERATRKYSNYTLNIALA FT YGGRSEITDAVRDIVGDVLAGKVKPEDIDEDLIKRYLYYPNMPDPDIVIRTGGEVRISN FT FLLYQIAYSELFFVDVYFPEFRKIDFLRIIREYQKRQRRFGR" FT gene complement(681184..682128) FT /locus_tag="TGAM_0720" FT /note="tg0720" FT CDS complement(681184..682128) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0720" FT /product="Type I restriction endonuclease, putative" FT /db_xref="GOA:C5A4R0" FT /db_xref="InterPro:IPR007409" FT /db_xref="UniProtKB/TrEMBL:C5A4R0" FT /inference="protein motif:CDD:COG2810, Predicted type IV FT restriction endonuclease [Defense mechanisms]" FT /inference="protein motif:COG:COG2810 Predicted type IV FT restriction endonuclease; V Defense mechanisms" FT /inference="protein motif:HMMPfam:PF04313 HSDR_N FT InterPro:IPR007409 Type I restriction enzyme R protein N FT terminus" FT /protein_id="ACS33222.1" FT /translation="MAESNLDALSSTHELTRLETRSSDIGPIAEGIMKVLKKINAHRKL FT YETNEEAVKQHLIGEVMRTLGWEWDNPEEVRPESRTEEGRADYALILGGEIVAYVEAKN FT LGVNIEKREEPLRQLAKYCFNTGVRYGILTNGAVWIGVKAFEVGSSLRERILVKVNLLN FT EPPMKAALKLSLFSKSRILEMERISSLLKALELSFMGLVKEGYPREALFEYLKVDRGKR FT IVPIHLLEGHENPKVAYVYDNGWKLLPLPERTMKGVLLAVLLYMGQKAFGDEKREIMAA FT YEQLKRIPLEQRKAHEILVRLEEEKKLNISVEL" FT gene 682224..683018 FT /locus_tag="TGAM_0721" FT /note="tg0721" FT CDS 682224..683018 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0721" FT /product="N-terminal aminohydrolase (Ntn hydrolase), FT putative" FT /db_xref="GOA:C5A4R1" FT /db_xref="InterPro:IPR017932" FT /db_xref="UniProtKB/TrEMBL:C5A4R1" FT /inference="protein motif:CDD:COG0121, Predicted glutamine FT amidotransferase [General function prediction only]" FT /inference="protein motif:CDD:Gn_AT_II, Glutamine FT amidotransferases class-II (GATase)" FT /inference="protein motif:CDD:YafJ, Glutamine FT amidotransferases class-II (Gn-AT)_YafJ-type" FT /inference="protein motif:COG:COG0121 Predicted glutamine FT amidotransferase; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.60.20.10 no FT description" FT /inference="protein motif:superfamily:SSF56235 N-terminal FT nucleophile aminohydrolases (Ntn hydrolases)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33223.1" FT /translation="MCRVLFAVGEGEKMAPLVEAMVRASEKDPYKEARGKGSRHRDGWG FT YVLFNGGSLQHYRSIRPIFEDSPGVKTLVELLDGFSVLLVHSRAASQGSKGILNTQPFS FT LSSTGFSCWIYHNGDLNKAGLVERAGLDESSLKKASDSYVMALYVCRALHSVSKGELLR FT VYSSIMPFVNTSLNTGSLFISHEWVRGFITAYSRPEYLLKRENWDYVRQILLRSRDVFA FT VASSTLELYYEAKWNSLRNGTALYLEISPEEGRFTVDELVMG" FT gene 683064..683474 FT /locus_tag="TGAM_0722" FT /note="tg0722" FT CDS 683064..683474 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0722" FT /product="Conserved hypothetical protein, containing 2 FT CBS-domains" FT /db_xref="GOA:C5A4R2" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR013785" FT /db_xref="UniProtKB/TrEMBL:C5A4R2" FT /inference="protein motif:CDD:COG0517, FOG:CBS domain FT [General function prediction only]" FT /inference="protein motif:CDD:COG2524, Predicted FT transcriptional regulator, contains C-terminal CBS domains FT [Transcription]" FT /inference="protein motif:CDD:COG2905, Predicted FT signal-transduction protein containing cAMP-binding and CBS FT domains [Signal transduction mechanisms]" FT /inference="protein motif:CDD:COG3448, FT CBS-domain-containing membrane protein [Signal transduction FT mechanisms]" FT /inference="protein motif:COG:COG0517 FOG:CBS domain; R FT General function prediction only" FT /inference="protein motif:HMMPanther:PTHR11911 FT INOSINE/GUANOSINE-5'-MONOPHOSPHATE DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR11911:SF2 FT INOSINE-5-MONOPHOSPHATE DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00571 CBS FT InterPro:IPR000644 CBS" FT /inference="protein motif:HMMSmart:SM00116 no description FT InterPro:IPR000644 CBS" FT /inference="protein motif:ProfileScan:PS50147 SNF4_REP FT InterPro:IPR000644 CBS" FT /inference="protein motif:superfamily:SSF54631 CBS-domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33224.1" FT /translation="MDMKAPIRVYMSRKLIGIRPDDTVKRAGEIMTEFDIGSLVVVDEN FT GDVVGFLTKGDIIRRLVVPGLPNTTPVREIMTKNLVTVPAETPLQDVLDVMAKKGLKHI FT LIEENGKIVGIFSITDLLEASRRKLETAIATE" FT gene 683471..684982 FT /locus_tag="TGAM_0723" FT /note="tg0723" FT CDS 683471..684982 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0723" FT /product="Metallophosphoesterase, Calcineurin-like FT phosphoesterase family" FT /db_xref="GOA:C5A4R3" FT /db_xref="InterPro:IPR004843" FT /db_xref="InterPro:IPR024654" FT /db_xref="UniProtKB/TrEMBL:C5A4R3" FT /inference="protein motif:CDD:Icc, Predicted FT phosphohydrolases [General function prediction only]" FT /inference="protein motif:CDD:Metallophos, Calcineurin-like FT phosphoesterase" FT /inference="protein motif:COG:COG1409 Predicted FT phosphohydrolases; R General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.60.21.10 no FT description" FT /inference="protein motif:HMMPfam:PF00149 Metallophos FT InterPro:IPR004843 Metallophosphoesterase GO:Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:ProfileScan:PS50185 PHOSPHO_ESTER FT InterPro:IPR004843 Metallophosphoesterase GO:Molecular FT Function:hydrolase activity (GO:0016787)" FT /inference="protein motif:superfamily:SSF56300 FT Metallo-dependent phosphatases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33225.1" FT /translation="MMAMIKIAHISDTHITNEGAFKGYAFDLIVEEINRGDFDFVVHTG FT DITNQGLREEYEQAAYQLGKIRKPLVVIPGNHDVRNVGYKLFEKFIGPLNGVYEFDNGV FT LIWVDSTIPDLSDGRIGGHKFRWLKAKLEEYSDRRFKIVAAHHHLVPLPDTGRERNVLF FT NAGDVLDLLLRHEVTLYTCGHKHVPNVYRVEDLVIDNAGCTSCRKTRRGDVNSYNIIKL FT HDDGRVSVTIRRVTGDEERKDHKPIRPKIFIPSGKRVLRIVQLSESNVSDRVYFRRKVF FT ENVIRMINERLKPDLVIHNGDVVDAGIERYYERAYEYYRAISAEKLVVPGHNDITYLGH FT ELFEEYFGEPEVIEFDGYVIIPVLSAQYETPIGVVGRMGQKKLEKVLEEYDDRFRIVVM FT HHNVIPIPRSREIGFLEDGGDVLKLLTREGTELVLTGHGGNAYGVKVERTPIVNAGSVS FT WELHRNPFGNSFNLIDVYTDMVVVWEVQATWGSRKLLGIWKRKGN" FT gene complement(684979..685851) FT /locus_tag="TGAM_0724" FT /note="tg0724" FT CDS complement(684979..685851) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0724" FT /product="2-phosphoglycerate kinase, containing ATP cone FT domain" FT /db_xref="GOA:C5A4R4" FT /db_xref="InterPro:IPR005144" FT /db_xref="UniProtKB/TrEMBL:C5A4R4" FT /inference="protein motif:CDD:COG2074, 2-phosphoglycerate FT kinase [Carbohydrate transport and metabolism]" FT /inference="protein motif:COG:COG2074 2-phosphoglycerate FT kinase; G Carbohydrate transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:HMMPfam:PF03477 ATP-cone FT InterPro:IPR005144 ATP-cone" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33226.1" FT /translation="MILVVDKETGAKLPFSRGILTRSITLSGVDVGVAYAIASAVQKEL FT IKRGKRFVTTDEIRELTYSTLIERGLREEAERYLFWRTLRRRKVRLTVLLGGATGVGKS FT TIATELAFRLGILSIIGTDTIREVLRKVIARELLPDIHVSSFLASNVVNAPRGIDPLIY FT GFETQVKHVSVGIKAVLERSRREGLNAIIEGIHVVPGFIELDENEFMYVITVPGRESLL FT AHFYERARYSPRGAERYVKNVEKIMRIQDYIVDRAKELGIPVIENVELEKAVTAIMEDL FT MKRLKKEVD" FT gene complement(685835..687151) FT /gene="cdpgs" FT /locus_tag="TGAM_0725" FT /note="tg0725" FT CDS complement(685835..687151) FT /codon_start=1 FT /transl_table=11 FT /gene="cdpgs" FT /locus_tag="TGAM_0725" FT /product="Cyclic 2,3-diphosphoglycerate synthase (cdpgs)" FT /db_xref="GOA:C5A4R5" FT /db_xref="InterPro:IPR016557" FT /db_xref="UniProtKB/Swiss-Prot:C5A4R5" FT /inference="protein motif:CDD:COG2403, Predicted GTPase FT [General function prediction only]" FT /inference="protein motif:COG:COG2403 Predicted GTPase; R FT General function prediction only" FT /inference="protein motif:Gene3D:G3D.3.40.50.300 no FT description" FT /inference="protein motif:superfamily:SSF52540 P-loop FT containing nucleoside triphosphate hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33227.1" FT /translation="MKIALIDGEHYPDVVKWALDKLGNVCCAVFLGGSEKIGSLEEVER FT RLGVPIYRHDDYLTALARALAENPGVKEVVDLSDEPIVGYEDRFRIASLCLLHGVTYRG FT ADFVFKPRPLNRTSKPSIGVIGTGKRVGKTAVSGFVARTLKAITRPVIVTMGRGGPEEP FT ELIDGEKLEITPEFLLRIAESGRHAASDHFEDALTSRVTTIGCRRCGGGMAGFPFFDAV FT DRGISLAESLPHDLIILEGSGATFPPYRADAYVVVVGARQELSSIANYFGPFRLSLADL FT VVVTMADLVKEEKIEKIVGVVEGVIPRAEVHVTVFRPRPLGDVSGKRIGLVMTSEEALE FT SSARHLEALGAEVLHSSGNLSRRKALLRDLEGFSGIEGIAVELKAAAVDVVTRWALERG FT IEVIYLDNEPVNIDGKNLREAVLRLGKKVLGRRADDTRR" FT gene 687308..687487 FT /locus_tag="TGAM_0726" FT /note="tg0726" FT CDS 687308..687487 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0726" FT /product="Conserved hypothetical protein" FT /note="Contains 1 Histone-fold domain" FT /db_xref="GOA:C5A4R6" FT /db_xref="InterPro:IPR009072" FT /db_xref="UniProtKB/TrEMBL:C5A4R6" FT /inference="protein motif:Gene3D:G3D.1.10.20.10 no FT description" FT /inference="protein motif:superfamily:SSF47113 Histone-fold FT InterPro:IPR009072 Histone-fold" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33228.1" FT /translation="MAEIIVKSKVKEFVKSLDAEMRVSPEFYDALEAEVKVLIEKAVKR FT AKEEGRKTLYARHV" FT gene 687537..688415 FT /locus_tag="TGAM_0727" FT /note="tg0727" FT CDS 687537..688415 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0727" FT /product="Metal-dependent hydrolase, beta-lactamase FT superfamily" FT /db_xref="GOA:C5A4R7" FT /db_xref="InterPro:IPR001279" FT /db_xref="UniProtKB/TrEMBL:C5A4R7" FT /inference="protein motif:CDD:GloB, Zn-dependent FT hydrolases, including glyoxylases [General function FT prediction only]" FT /inference="protein motif:CDD:Lactamase_B, FT Metallo-beta-lactamase superfamily" FT /inference="protein motif:COG:COG0491 Zn-dependent FT hydrolases, including glyoxylases; R General function FT prediction only" FT /inference="protein motif:Gene3D:G3D.3.60.15.10 no FT description" FT /inference="protein motif:HMMPfam:PF00753 Lactamase_B FT InterPro:IPR001279 Beta-lactamase-like" FT /inference="protein motif:superfamily:SSF56281 FT Metallo-hydrolase/oxidoreductase" FT /protein_id="ACS33229.1" FT /translation="MGLRKLSDFAYLYPGSPSTLLRVHNGKLVIVDPGHGKGRHKDLKR FT ESRKLGLEIKAQLVTHGHADHVAVSTKLEAPLYIHRFEFSIAESPLAREIITFGAKAPK FT GFLVFQFPEEVRVHAVFEWGDDLFGLKALNLSGHSPGMTGFFDLESGLIYAGDAFFGER FT VLETVGLPYFVDLAGFKDSLGRLLRYADDGYLLIPSHGRPVVEEEARSLIMKNLERVEE FT IERLVQDLLESPLGIDEIAFKLMRLYSVEITPQKLALNLVPVRAVIAEFYNRGLIDATV FT EKGLKWRVVKG" FT gene complement(688511..689803) FT /gene="asnS-1" FT /locus_tag="TGAM_0728" FT /note="tg0728" FT CDS complement(688511..689803) FT /codon_start=1 FT /transl_table=11 FT /gene="asnS-1" FT /locus_tag="TGAM_0728" FT /product="Asparaginyl-tRNA synthetase (asnS)" FT /EC_number="6.1.1.22" FT /db_xref="GOA:C5A4R8" FT /db_xref="InterPro:IPR002312" FT /db_xref="InterPro:IPR004364" FT /db_xref="InterPro:IPR004365" FT /db_xref="InterPro:IPR004522" FT /db_xref="InterPro:IPR006195" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="InterPro:IPR018150" FT /db_xref="UniProtKB/Swiss-Prot:C5A4R8" FT /inference="protein motif:CDD:AsnRS_cyto_like_N, FT AsnRS_cyto_like_N:N-terminal, anticodon recognition domain FT of the type found in human and Saccharomyces cerevisiae FT cytoplasmic asparaginyl-tRNA synthetase (AsnRS), in Brugia FT malayai AsnRs and, in various putative bacterial AsnRSs" FT /inference="protein motif:CDD:AsnS, FT Aspartyl/asparaginyl-tRNA synthetases [Translation, FT ribosomal structure and biogenesis]" FT /inference="protein motif:CDD:AspRS_core, Asp tRNA FT synthetase (aspRS) class II core domain" FT /inference="protein motif:CDD:AspS, Aspartyl-tRNA FT synthetase [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:Asp_Lys_Asn_RS_core, FT Asp_Lys_Asn_tRNA synthetase class II core domain" FT /inference="protein motif:CDD:Asp_Lys_Asn_RS_N, FT Asp_Lys_Asn_RS_N:N-terminal, anticodon recognition domain FT of class 2b aminoacyl-tRNA synthetases (aaRSs)" FT /inference="protein motif:CDD:AsxRS_core, Asx tRNA FT synthetase (AspRS/AsnRS) class II core domain" FT /inference="protein motif:CDD:EcAspRS_like_N, FT EcAspRS_like_N:N-terminal, anticodon recognition domain of FT the type found in Escherichia coli aspartyl-tRNA synthetase FT (AspRS), the human mitochondrial (mt) AspRS-2, the FT discriminating (D) Thermus thermophilus AspRS-1, and the FT nondiscriminating (ND) Helicobacter pylori AspRS" FT /inference="protein motif:CDD:LysRS_core, Lys_tRNA FT synthetase (LysRS) class II core domain" FT /inference="protein motif:CDD:LysU, Lysyl-tRNA synthetase FT (class II) [Translation, ribosomal structure and FT biogenesis]" FT /inference="protein motif:CDD:ND_PkAspRS_like_N, FT ND_PkAspRS_like_N:N-terminal, anticodon recognition domain FT of the type found in the homodimeric non-discriminating FT (ND) Pyrococcus kodakaraensis aspartyl-tRNA synthetase FT (AspRS)" FT /inference="protein motif:CDD:PhAsnRS_like_N, FT PhAsnRS_like_N:N-terminal, anticodon recognition domain of FT the type found in Pyrococcus horikoshii AsnRS FT asparaginyl-tRNA synthetase (AsnRS)" FT /inference="protein motif:CDD:tRNA-synt_2, tRNA synthetases FT class II (D, K and N)" FT /inference="protein motif:CDD:tRNA_anti, OB-fold nucleic FT acid binding domain" FT /inference="protein motif:COG:COG0017 FT Aspartyl/asparaginyl-tRNA synthetases; J Translation, FT ribosomal structure and biogenesis" FT /inference="protein motif:FPrintScan:PR01042 TRNASYNTHASP FT InterPro:IPR002312 Aspartyl-tRNA synthetase, class IIb FT GO:Molecular Function:aspartate-tRNA ligase activity FT (GO:0004815), Molecular Function:ATP binding (GO:0005524), FT Biological Process:aspartyl-tRNA aminoacylation FT (GO:0006422)" FT /inference="protein motif:Gene3D:G3D.3.30.930.10 no FT description" FT /inference="protein motif:HMMPanther:PTHR10218 GUANINE FT NUCLEOTIDE BINDING PROTEIN ALPHA SUBUNIT-RELATED" FT /inference="protein motif:HMMPanther:PTHR10218:SF3 FT ASPARTYL-TRNA SYNTHETASE" FT /inference="protein motif:HMMPfam:PF00152 tRNA-synt_2 FT InterPro:IPR004364 tRNA synthetase, class II (D, K and N) FT GO:Molecular Function:aminoacyl-tRNA ligase activity FT (GO:0004812), Molecular Function:ATP binding (GO:0005524), FT Cellular Component:cytoplasm (GO:0005737), Biological FT Process:tRNA aminoacylation for protein translation FT (GO:0006418)" FT /inference="protein motif:HMMPfam:PF01336 tRNA_anti FT InterPro:IPR004365 nucleic acid binding, OB-fold, FT tRNA/helicase-type GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /inference="protein motif:HMMTigr:TIGR00457 FT asnS:asparaginyl-tRNA synthetase InterPro:IPR004522 FT Asparaginyl-tRNA synthetase, class IIb GO:Molecular FT Function:asparagine-tRNA ligase activity (GO:0004816), FT Molecular Function:ATP binding (GO:0005524), Cellular FT Component:cytoplasm (GO:0005737), Biological FT Process:asparaginyl-tRNA aminoacylation (GO:0006421)" FT /inference="protein motif:ProfileScan:PS50862 FT AA_TRNA_LIGASE_II InterPro:IPR006195 Aminoacyl-transfer RNA FT synthetase, class II GO:Molecular Function:aminoacyl-tRNA FT ligase activity (GO:0004812), Molecular Function:ATP FT binding (GO:0005524), Biological Process:tRNA FT aminoacylation for protein translation (GO:0006418)" FT /inference="protein motif:superfamily:SSF50249 Nucleic FT acid-binding proteins InterPro:IPR008994 Nucleic FT acid-binding, OB-fold GO:Molecular Function:nucleic acid FT binding (GO:0003676)" FT /inference="protein motif:superfamily:SSF55681 Class II FT aaRS and biotin synthetases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33230.1" FT /translation="MIDKVYCADVKPEMEGKRVKLAGWVYRKREVGKKVFIVLRDSSGI FT VQVVFSKELNEEAYREAKKLGIESSVIIEGTVKADPRAPTGAEVQADKLQVIQNVDFFP FT ITKDASPEFLLDVRHLHLRSPKVASIMKVKGTLMQAAREWLLQDGWYEVFPPILVTGAV FT EGGSTLFKLKYFDKTAYLSQSAQLYLEAAIFGLEKVWSLTPSFRAEKSRTRRHLTEFWH FT LELEAAWMDLWDIMKVEEELVSYMVQRTLELRRSEIETFRKDLTTLKNAVPPFPRISYD FT EAIDILQSKGVEIEWGEDMGADEERVLTEEFEAPFFVYGYPKHIKAFYMKEDPEDPRKV FT LAADMLAPEGYGEIIGGSQREDNYDKLIQRILEEGMDPKDYEWYLDLRKYGSVPHSGFG FT LGLERLVAWVLKLDHVRWATLFPRTPSRLYP" FT gene 690024..691223 FT /locus_tag="TGAM_0729" FT /note="tg0729" FT CDS 690024..691223 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0729" FT /product="Metal-dependent chlorohydrolase family protein" FT /db_xref="GOA:C5A4R9" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="UniProtKB/TrEMBL:C5A4R9" FT /inference="protein motif:BlastProDom:PD001248 FT YF05_METTH_O27549; InterPro:IPR011550 Amidohydrolase-like" FT /inference="protein motif:CDD:Amidohydro_1, Amidohydrolase FT family" FT /inference="protein motif:CDD:archeal_chlorohydrolases, FT Predicted chlorohydrolases" FT /inference="protein motif:CDD:ATZ_TRZ_like, TRZ/ATZ family FT contains enzymes from the atrazine degradation pathway and FT related hydrolases" FT /inference="protein motif:CDD:Bact_CD, Bacterial cytosine FT deaminase and related metal-dependent hydrolases" FT /inference="protein motif:CDD:GDEase, Guanine deaminase FT (GDEase)" FT /inference="protein motif:CDD:HutI, Imidazolonepropionase FT and related amidohydrolases [Secondary metabolites FT biosynthesis, transport, and catabolism]" FT /inference="protein motif:CDD:Imidazolone-5PH, FT Imidazolonepropionase/imidazolone-5-propionate hydrolase FT (Imidazolone-5PH) catalyzes the third step in the histidine FT degradation pathway, the hydrolysis of FT (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to FT N-formimidoyl-L-glutamate" FT /inference="protein motif:CDD:metallo-dependent_hydrolases, FT Superfamily of metallo-dependent hydrolases (also called FT amidohydrolase superfamily) is a large group of proteins FT that show conservation in their 3-dimensional fold (TIM FT barrel) and in details of their active site" FT /inference="protein motif:CDD:Met_dep_hydrolase_D, FT Metallo-dependent hydrolases, subgroup D is part of the FT superfamily of metallo-dependent hydrolases, a large group FT of proteins that show conservation in their 3-dimensional FT fold (TIM barrel) and in details of their active site" FT /inference="protein motif:CDD:Met_dep_hydrolase_E, FT Metallo-dependent hydrolases, subgroup D is part of the FT superfamily of metallo-dependent hydrolases, a large group FT of proteins that show conservation in their 3-dimensional FT fold (TIM barrel) and in details of their active site" FT /inference="protein motif:CDD:SsnA, Cytosine deaminase and FT related metal-dependent hydrolases [Nucleotide transport FT and metabolism / General function prediction only]" FT /inference="protein motif:COG:COG0402 Cytosine deaminase FT and related metal-dependent hydrolases; F Nucleotide FT transport and metabolism" FT /inference="protein motif:HMMPanther:PTHR11271 ATRAZINE FT CHLOROHYDROLASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11271:SF13 FT N-ETHYLAMMELINE CHLOROHYDROLASE" FT /inference="protein motif:superfamily:SSF51338 Composite FT domain of metallo-dependent hydrolases InterPro:IPR011059 FT Metallo-dependent hydrolase, composite" FT /protein_id="ACS33231.1" FT /translation="MLALVGKLVDYRSVRNGAVIVEDNIIRAVVPVEELREWGVDEVYG FT GENYLVIPGLINAHTHVAMAKFRGLGEDLPTEEWLEKIIWPMELEWTRREIRKWAEIGI FT KEALMNGSTTINDHYFFADEIAKVAERLGVRAFIGQTVMDEVDFSPASPDEGFRFFRRW FT QNKSELVKLTLAPHATNTVSLDLLREIAELSEETGARVHIHLAQSRAEVSEVRRRYGLS FT PVGLLERAGLLNGRLIGVHGVYLDDSDFRSLAKAGPSLVHCPTSNVKLEAQTVNLRKLL FT DLGLNVALGNDSPNPTGILDPFLEMRTAGIVANLTAGRAHAVPARELFGMATVRGAHAL FT GLKAGLIEPGYLADLVLINADKPWFRPIENVYSLLVYSVRGSDVEKVVVNGRPVHRKIY FT " FT gene 691305..692477 FT /locus_tag="TGAM_0730" FT /note="tg0730" FT CDS 691305..692477 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0730" FT /product="Conserved hypothetical protein, Inosine-5'P FT dehydrogenase related protein" FT /note="Contains 2 CBS domains pairs" FT /db_xref="GOA:C5A4S0" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR014651" FT /db_xref="UniProtKB/TrEMBL:C5A4S0" FT /inference="protein motif:CDD:COG0517, FOG:CBS domain FT [General function prediction only]" FT /inference="protein motif:CDD:COG2524, Predicted FT transcriptional regulator, contains C-terminal CBS domains FT [Transcription]" FT /inference="protein motif:CDD:COG3448, FT CBS-domain-containing membrane protein [Signal transduction FT mechanisms]" FT /inference="protein motif:CDD:MgtE, Mg/Co/Ni transporter FT MgtE (contains CBS domain) [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:COG:COG0517 FOG:CBS domain; R FT General function prediction only" FT /inference="protein motif:HMMPanther:PTHR11911 FT INOSINE/GUANOSINE-5'-MONOPHOSPHATE DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR11911:SF2 FT INOSINE-5-MONOPHOSPHATE DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00571 CBS FT InterPro:IPR000644 CBS" FT /inference="protein motif:HMMSmart:SM00116 no description FT InterPro:IPR000644 CBS" FT /inference="protein motif:ProfileScan:PS50147 SNF4_REP FT InterPro:IPR000644 CBS" FT /inference="protein motif:superfamily:SSF54631" FT /inference="protein motif:superfamily:SSF54631 CBS-domain" FT /inference="protein motif:superfamily:SSF69754 Ribosome FT binding protein Y (YfiA homologue)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33232.1" FT /translation="MVGIQVQEVMTDRFEKIDIDAPLSEAIGIFEKEDPDLILVFDGNL FT YKGVLTQDLIIRSHLKWDPTKAKVRDVYKPAPVIKPDEDLSKAAKLMMEVDLRSLPVGE FT SKAEIIGVINDIALLERVSEGDFGKRKVEEFMTKDVITLKPDDTVAKALATMRDYAISR FT IPIVDEEGRLEGLVTLHDLIIRFIKPRFRAQAGELAGEKIPPFSMPLRDVMIKGVITIL FT PDAKVREAVATMRDNDIDGLIVVNEDNKVVGVLTVKDLLLPISKMTEKEARFYLQLGGD FT AAILSDFTRERIISDIRRFVDGYEDLLGQEGIIYLYIRRFKEKFRGVHLYQARMRVVTD FT RGVFVATGETWGAIQAVHDALRAIERQLLQKAELEKDIRYAKRFLEKLEF" FT gene 692541..693776 FT /gene="apgM" FT /locus_tag="TGAM_0731" FT /note="tg0731" FT CDS 692541..693776 FT /codon_start=1 FT /transl_table=11 FT /gene="apgM" FT /locus_tag="TGAM_0731" FT /product="2,3-bisphosphoglycerate-independent FT phosphoglycerate mutase (apgM)" FT /EC_number="5.4.2.1" FT /db_xref="GOA:C5A4S1" FT /db_xref="InterPro:IPR004456" FT /db_xref="InterPro:IPR006124" FT /db_xref="InterPro:IPR017849" FT /db_xref="InterPro:IPR017850" FT /db_xref="InterPro:IPR023665" FT /db_xref="UniProtKB/Swiss-Prot:C5A4S1" FT /inference="protein motif:BlastProDom:PD004704 FT APG1_METJA_Q59007; InterPro:IPR011562 Cofactor-independent FT phosphoglycerate mutase/phosphopentomutase GO:Molecular FT Function:intramolecular transferase activity, FT phosphotransferases (GO:0016868)" FT /inference="protein motif:CDD:COG3635, Predicted FT phosphoglycerate mutase, AP superfamily [Carbohydrate FT transport and metabolism]" FT /inference="protein motif:CDD:Metalloenzyme, Metalloenzyme FT superfamily" FT /inference="protein motif:COG:COG3635 Predicted FT phosphoglycerate mutase, AP superfamily; G Carbohydrate FT transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.1150.10 no FT description" FT /inference="protein motif:HMMPfam:PF01676 Metalloenzyme FT InterPro:IPR006124 Metalloenzyme GO:Molecular FT Function:catalytic activity (GO:0003824), Molecular FT Function:metal ion binding (GO:0046872)" FT /inference="protein motif:HMMPIR:PIRSF006392 FT Cofactor-independent phosphoglycerate mutase, archaeal type FT InterPro:IPR004456 Cofactor-independent phosphoglycerate FT mutase, archaeal GO:Molecular Function:catalytic activity FT (GO:0003824), Molecular Function:metal ion binding FT (GO:0046872)" FT /inference="protein motif:HMMTigr:TIGR00306 FT apgM:2,3-bisphosphoglycerate-independent ph FT InterPro:IPR004456 Cofactor-independent phosphoglycerate FT mutase, archaeal GO:Molecular Function:catalytic activity FT (GO:0003824), Molecular Function:metal ion binding FT (GO:0046872)" FT /inference="protein motif:superfamily:SSF53649 Alkaline FT phosphatase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33233.1" FT /translation="MKKRKGLLIILDGLGDRPIKEFGGKTPLEYAKTPNMDKLAKLGIL FT GQQDPIKPGQPAGSDTAHLSIFGYDPYKVYRGRGFLEALGVGLDLDEDDLAFRVNFATI FT ENGIITDRRAGRISTEEAHELAKAIQENVKLPVDFIFVGATGHRAVLVLKGMAKGYRVG FT ENDPHEAGKPPHRFTWEDEESKRVAEILEEFVRQAHEVLERHPINEKRRKEGKPVANYL FT LIRGAGTYPDIPMKFTEQWKVRAGAVIAVSLVKGVARAIGFDVYTPEGATGEYNTDEMA FT KAKKTVELLKEYDFVFLHFKPTDAAGHDNNPKLKAEMIEKADRMIGYIIEHINLEDVVI FT AITGDHSTPCEVMNHSGDPVPLLIVGGGVRPDHTESFGERECMRGGLGRIRGHDIVPVM FT MDLMNRSEKFGA" FT gene 694022..694528 FT /locus_tag="TGAM_0732" FT /note="tg0732" FT CDS 694022..694528 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0732" FT /product="Hypothetical protein" FT /note="5 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4S2" FT /protein_id="ACS33234.1" FT /translation="MHGRKKALIGVLAGLLPLISIVLGGFWEGYDDVMFLTSFLIYALL FT LPWTVEEQGEETILLLIGSMALMAPAMDMLLNQPGIVAITDDSVGLSFSAPDYLLSSAS FT GVAYYTALSRISKKTGTSAFRVQGLSYLIATVGSVTPLGILGFLGWIFGVPVSHFIHYR FT GRGTD" FT gene 694653..695495 FT /locus_tag="TGAM_0733" FT /note="tg0733" FT CDS 694653..695495 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0733" FT /product="Oxidoreductase, aldo/keto reductase family" FT /db_xref="GOA:C5A4S3" FT /db_xref="InterPro:IPR001395" FT /db_xref="InterPro:IPR018170" FT /db_xref="InterPro:IPR020471" FT /db_xref="InterPro:IPR023210" FT /db_xref="UniProtKB/TrEMBL:C5A4S3" FT /inference="protein motif:BlastProDom:PD000288 FT O57749_PYRHO_O57749; InterPro:IPR001395 Aldo/keto reductase FT GO:Molecular Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:CDD:Aldo_ket_red, Aldo/keto FT reductase family" FT /inference="protein motif:CDD:ARA1, Aldo/keto reductases, FT related to diketogulonate reductase [General function FT prediction only]" FT /inference="protein motif:CDD:COG1453, Predicted FT oxidoreductases of the aldo/keto reductase family [General FT function prediction only]" FT /inference="protein motif:CDD:COG4989, Predicted FT oxidoreductase [General function prediction only]" FT /inference="protein motif:CDD:Tas, Predicted FT oxidoreductases (related to aryl-alcohol dehydrogenases) FT [Energy production and conversion]" FT /inference="protein motif:COG:COG0656 Aldo/keto reductases, FT related to diketogulonate reductase; R General function FT prediction only" FT /inference="protein motif:FPrintScan:PR00069 ALDKETRDTASE FT InterPro:IPR001395 Aldo/keto reductase GO:Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:Gene3D:G3D.3.20.20.100 no FT description" FT /inference="protein motif:HMMPanther:PTHR11732 ALDO/KETO FT REDUCTASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR11732:SF79 FT MORPHINE 6-DEHYDROGENASE-RELATED" FT /inference="protein motif:HMMPfam:PF00248 Aldo_ket_red FT InterPro:IPR001395 Aldo/keto reductase GO:Molecular FT Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:ScanRegExp:PS00062 FT ALDOKETO_REDUCTASE_2 InterPro:IPR001395 Aldo/keto reductase FT GO:Molecular Function:oxidoreductase activity (GO:0016491)" FT /inference="protein motif:superfamily:SSF51430 FT NAD(P)-linked oxidoreductase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33235.1" FT /translation="MMVLKMVKISDLKIIGDDKVTAIGMGTWGIGGYESPDYSRDEENV FT EVLRYGLELGINLIDTAEFYGAGHSEELVGRAIEGFDRDELFIISKVWPTNFGYERAKR FT AVRASAKRLGTYIDLYLLHWPGTEWRKIEETLHALEELVDEGLIRYIGVSNFDLELLKR FT SQEAMRKYEIVANEVKYSLRDRWPETSGLLDYMKKEKIALIAYTPLEKGSLARNPCLAE FT IGRKYGKSAAQVALNYLIWEENVIAIPKAGRKEHVEENAGAMGWRLSREDRERARGCV" FT gene 695495..696892 FT /gene="aor-1" FT /locus_tag="TGAM_0734" FT /note="tg0734" FT CDS 695495..696892 FT /codon_start=1 FT /transl_table=11 FT /gene="aor-1" FT /locus_tag="TGAM_0734" FT /product="Tungsten-containing aldehyde ferredoxin FT oxidoreductase, N-terminal fragment (aor)" FT /EC_number="1.2.7.5" FT /note="frameshift with tg0735 due to consensus error; 1 FT probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A4S4" FT /db_xref="InterPro:IPR001203" FT /db_xref="InterPro:IPR013983" FT /db_xref="InterPro:IPR013984" FT /db_xref="UniProtKB/TrEMBL:C5A4S4" FT /inference="protein motif:CDD:AFOR_C, Aldehyde ferredoxin FT oxidoreductase, domains 2 & 3" FT /inference="protein motif:CDD:AFOR_N, Aldehyde ferredoxin FT oxidoreductase, N-terminal domain" FT /inference="protein motif:CDD:COG2414, Aldehyde:ferredoxin FT oxidoreductase [Energy production and conversion]" FT /inference="protein motif:COG:COG2414 Aldehyde:ferredoxin FT oxidoreductase; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.1.10.569.10 no FT description" FT /inference="protein motif:Gene3D:G3D.3.60.9.10 no FT description" FT /inference="protein motif:HMMPfam:PF01314 AFOR_C FT InterPro:IPR001203 Aldehyde ferredoxin oxidoreductase FT GO:Biological Process:electron transport (GO:0006118), FT Molecular Function:oxidoreductase activity, acting on FT iron-sulfur proteins as donors (GO:0016730)" FT /inference="protein motif:HMMPfam:PF02730 AFOR_N FT InterPro:IPR001203 Aldehyde ferredoxin oxidoreductase FT GO:Biological Process:electron transport (GO:0006118), FT Molecular Function:oxidoreductase activity, acting on FT iron-sulfur proteins as donors (GO:0016730)" FT /inference="protein motif:superfamily:SSF48310 Aldehyde FT ferredoxin oxidoreductase, C-terminal domains" FT /inference="protein motif:superfamily:SSF56228 Aldehyde FT ferredoxin oxidoreductase, N-terminal domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33236.1" FT /translation="MFTYHNRIARVNLTEGTVTYEELPDEVIRKFIGGKGLGYYLIYWE FT VPPGTDPLSPANKFVFATGGLTGLIPGSSKVIAVSKSPETRLISDSSGGDAFGPKLKGH FT FDALIIEGKAEEPVYLYVHDGEVEIRNAEHLWGRGNYEVAKELWREHPKASLALIGPAG FT ERLSRIANVIYDTERASGRGGLGAVLGSKKVKAIVVEPGEKPPVANPEEFQKLWQEFYE FT HFATDPKYEHSRKYGTSDGLRSSASLGMSPAYNFSRPYIPDELASKLGGDEVKKYEVEP FT EWFVHGKSCPIKCARYVEVEYRGRRIRVKPEYESIAMLGAATGVFNFPAVAYFNWLVNN FT LGLDSIATGNTIAWFFELVERGLISEEEIGFPVKGFGDEEAEERLIRLMAERKGIGAIL FT ADGVKRACERLGRGCEFAVHVKGMESPAWDPRGRRTYALSYATADVGASHLRGWPRPHQ FT LPEPGTR" FT gene 696900..697355 FT /gene="aor-2" FT /locus_tag="TGAM_0735" FT /note="tg0735" FT CDS 696900..697355 FT /codon_start=1 FT /transl_table=11 FT /gene="aor-2" FT /locus_tag="TGAM_0735" FT /product="Tungsten-containing aldehyde ferredoxin FT oxidoreductase, C-terminal fragment (aor)" FT /EC_number="1.2.7.5" FT /note="frameshift with tg0734 due to consensus error" FT /db_xref="GOA:C5A4S5" FT /db_xref="InterPro:IPR001203" FT /db_xref="InterPro:IPR013985" FT /db_xref="UniProtKB/TrEMBL:C5A4S5" FT /inference="protein motif:CDD:AFOR_C, Aldehyde ferredoxin FT oxidoreductase, domains 2 & 3" FT /inference="protein motif:CDD:COG2414, Aldehyde:ferredoxin FT oxidoreductase [Energy production and conversion]" FT /inference="protein motif:COG:COG2414 Aldehyde:ferredoxin FT oxidoreductase; C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.1.10.599.10 no FT description" FT /inference="protein motif:HMMPfam:PF01314 AFOR_C FT InterPro:IPR001203 Aldehyde ferredoxin oxidoreductase FT GO:Biological Process:electron transport (GO:0006118), FT Molecular Function:oxidoreductase activity, acting on FT iron-sulfur proteins as donors (GO:0016730)" FT /inference="protein motif:superfamily:SSF48310 Aldehyde FT ferredoxin oxidoreductase, C-terminal domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33237.1" FT /translation="MPSMIESRDESYITDMLGVCKFVPYRMEDLAELYSLATGEEWTVE FT RLRKIAQAVESIARIHNALDWVTPPLDDTIPPRWWEPEPDGPAKGNAAFIDYDDFLEAR FT REFYRLRGWHEELGVPLPETMEELGYPEFKEDAERALKVVKKRMGVE" FT gene complement(697430..698008) FT /locus_tag="TGAM_0736" FT /note="tg0736" FT CDS complement(697430..698008) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0736" FT /product="Potassium transport regulation protein, FT PhoU/TrkA-C related" FT /note="Contains 1 PhoU domain in Nterm and 1 TrkA-C domain FT in Cterm" FT /db_xref="GOA:C5A4S6" FT /db_xref="InterPro:IPR006037" FT /db_xref="InterPro:IPR008170" FT /db_xref="UniProtKB/TrEMBL:C5A4S6" FT /inference="protein motif:CDD:COG3273, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:COG:COG3273 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01895 PhoU FT InterPro:IPR008170 PhoU" FT /inference="protein motif:HMMPfam:PF02080 TrkA_C FT InterPro:IPR006037 TrkA-C GO:Biological Process:potassium FT ion transport (GO:0006813), Molecular Function:cation FT transporter activity (GO:0008324)" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33238.1" FT /translation="MSELDEIRNCLVEMKDLSALMVDLAFSSVLYNSEDIAEEVYLLEE FT KMDDLTLKVKKLALRAAKSEEDPESLLSIIDLADINERISDAAYAIADIILRDIEPHPI FT IRRIMEDTEEELGRVTVRPGSVLIGKTLQQLKLPSKIGTRILAIKRGTRYIYNPGKDDV FT IQEGDVLIAVSPDLDKLRKLAGEEVAEEE" FT gene complement(698001..698606) FT /locus_tag="TGAM_0737" FT /note="tg0737" FT CDS complement(698001..698606) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0737" FT /product="Potassium transport regulation protein, FT PhoU/TrkA-C related" FT /note="Contains 1 PhoU domain in Nterm and 1 TrkA-C domain FT in Cterm" FT /db_xref="GOA:C5A4S7" FT /db_xref="InterPro:IPR006037" FT /db_xref="InterPro:IPR008170" FT /db_xref="UniProtKB/TrEMBL:C5A4S7" FT /inference="protein motif:CDD:COG3273, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:CDD:TrkA_C, TrkA-C domain" FT /inference="protein motif:COG:COG3273 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01895 PhoU FT InterPro:IPR008170 PhoU" FT /inference="protein motif:HMMPfam:PF02080 TrkA_C FT InterPro:IPR006037 TrkA-C GO:Biological Process:potassium FT ion transport (GO:0006813), Molecular Function:cation FT transporter activity (GO:0008324)" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33239.1" FT /translation="MEEWDEIEVPNNVKDIFVEMKNTAELMVDLAYSSVLFQEKEIAEE FT VLELEEYLDLLNYHLMVKAVLAARSPKEAEQITAILQMGRAIDEISNAAADLAKMVLEE FT KLHPVVRDAILESEETIGKVQVSPESILVGKTLEELDLATNTGVWVSAIRRGKRWIFDP FT DEDTKIMPGDILIGRGTRTALDYLKEIARGILKVMKHE" FT gene 698710..699903 FT /locus_tag="TGAM_0738" FT /note="tg0738" FT CDS 698710..699903 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0738" FT /product="Divalent cation transporter, MgtE-like protein" FT /note="Contains 2 MgtE integral membrane regions; 9 FT probable transmembrane helices predicted by modhmm" FT /db_xref="GOA:C5A4S8" FT /db_xref="InterPro:IPR006667" FT /db_xref="UniProtKB/TrEMBL:C5A4S8" FT /inference="protein motif:CDD:COG1824, Permease, similar to FT cation transporters [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:MgtE, Divalent cation FT transporter" FT /inference="protein motif:COG:COG1824 Permease, similar to FT cation transporters; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPfam:PF01769 MgtE FT InterPro:IPR006667 MgtE integral membrane region FT GO:Biological Process:cation transport (GO:0006812), FT Molecular Function:cation transporter activity FT (GO:0008324)" FT /protein_id="ACS33240.1" FT /translation="MMAVIVSKGTAGYSGWRERLKGTFLITFPALLLCLALDFVGGGIL FT GKNFEKILTHYPLILVILPGMMDLRGNVFGALASRLTTALYLGKISRIRDPDVTTNITM FT AITSSTIPLIILWVAGAVQLGLSHSAIVVLAIVVSSALFIGLVLGYSTAFITVVPYKHS FT IDPDTIAAPLITSVADLITIPSLVYLIFFYERHPDEFYAFTALMVALLLVLIYRSRFTG FT EYRKSFREITLILTALAMIEIFSGSTLEHYGEVISKVIILSIMYPSILDSVGNFSSIVA FT ATTSTRLNLAGPSELRSRDFVADVGSVLLLSPVIGLLTNLIAVYVSHLAGLEGGMIWAF FT VATYPILVIVNALVGIGVAYVAYTHSIDPDNVAIPTVTTISDVLGTVYVVLLAESLA" FT gene 699948..701132 FT /locus_tag="TGAM_0739" FT /note="tg0739" FT CDS 699948..701132 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0739" FT /product="Divalent cation transporter, MgtE-like protein" FT /note="Contains 2 MgtE integral membrane regions; 9 FT probable transmembrane helices predicted by modhmm" FT /db_xref="GOA:C5A4S9" FT /db_xref="InterPro:IPR006667" FT /db_xref="UniProtKB/TrEMBL:C5A4S9" FT /inference="protein motif:CDD:COG1824, Permease, similar to FT cation transporters [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:CDD:MgtE, Divalent cation FT transporter" FT /inference="protein motif:COG:COG1824 Permease, similar to FT cation transporters; P Inorganic ion transport and FT metabolism" FT /inference="protein motif:HMMPanther:PTHR16228 FAMILY NOT FT NAMED" FT /inference="protein motif:HMMPfam:PF01769 MgtE FT InterPro:IPR006667 MgtE integral membrane region FT GO:Biological Process:cation transport (GO:0006812), FT Molecular Function:cation transporter activity FT (GO:0008324)" FT /protein_id="ACS33241.1" FT /translation="MRESMLSELRGKIGEAYRVTLPSLFTSQIFGLFGGTFLGKYFETV FT RLRFPGLLVVLPGIMGLRGNVFGSMASRFSTMLYLGELEPSLGDRRILKEIVLRMVLSL FT IPVFLLWAIGVLTGIKKNAFDVLLIVITSTILVSFILGYFTSFVTIFAFRRGTDPDSVA FT APLVASMGDFLTVPSLVLFILLIERSPWAFKAFNYVTIAFFLFVTALSRVRLEEFSELR FT QVFVTITALALLSTVSGSILARFSGIIQASVILSFIYPSLLSSFGNYGSIIAAKTSTKL FT HLGEIESFLCPKAFTDVIALFTTAPVIGLTKILIGGALMTLITGNPIPRSAYLVVLTYP FT FMVLFIMLYSYTLSYFLFQRSIDPDHVAIPLISNNSDIFGTIYVVLMARLMVGA" FT gene 701129..701902 FT /gene="nfo" FT /locus_tag="TGAM_0740" FT /note="tg0740" FT CDS 701129..701902 FT /codon_start=1 FT /transl_table=11 FT /gene="nfo" FT /locus_tag="TGAM_0740" FT /product="Deoxyribonuclease IV (BER) (Nfo)" FT /EC_number="3.1.21.2" FT /note="May be also related to Xylose isomerase" FT /db_xref="GOA:C5A4T0" FT /db_xref="InterPro:IPR012307" FT /db_xref="InterPro:IPR013022" FT /db_xref="UniProtKB/TrEMBL:C5A4T0" FT /inference="protein motif:CDD:AP2Ec, AP endonuclease family FT 2" FT /inference="protein motif:CDD:AP2Ec, AP endonuclease family FT 2; These endonucleases play a role in DNA repair" FT /inference="protein motif:CDD:AP_endonuc_2, AP endonuclease FT family 2" FT /inference="protein motif:CDD:IolE, Sugar phosphate FT isomerases/epimerases [Carbohydrate transport and FT metabolism]" FT /inference="protein motif:CDD:Nfo, Endonuclease IV [DNA FT replication, recombination, and repair]" FT /inference="protein motif:COG:COG1082 Sugar phosphate FT isomerases/epimerases; G Carbohydrate transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.20.150 no FT description" FT /inference="protein motif:HMMPfam:PF01261 AP_endonuc_2 FT InterPro:IPR012307 Xylose isomerase-like TIM barrel" FT /inference="protein motif:HMMSmart:SM00518 no description FT InterPro:IPR001719 AP endonuclease, family 2 GO:Molecular FT Function:DNA binding (GO:0003677), Molecular FT Function:endonuclease activity (GO:0004519), Cellular FT Component:intracellular (GO:0005622), Biological FT Process:DNA repair (GO:0006281)" FT /inference="protein motif:superfamily:SSF51658 Xylose FT isomerase-like" FT /protein_id="ACS33242.1" FT /translation="MIGLSMTSYKGRTPEEFERWLEEAEGLGFDFVELVSEWPNFLTRE FT TWKTYADVLGSFELKVTVHAPFSDVNIGSLNEKLRKASLEVLAETLDVASRLNALAVTV FT HPGHCSPASRKFREDYNRVHRDSLRELERFSGEFGIRVGVENMPAFLILDAQTPERLAE FT LLDGINLGVTLDLGHLNTVGFPFERFMELLGDRIVHVHLHDNSGKSDEHLPLGKGTVPW FT REVLPQLGGLTWALEVSGLDDARVSLAFLRDIGEL" FT gene 701990..703414 FT /gene="acdA-4" FT /locus_tag="TGAM_0741" FT /note="tg0741" FT CDS 701990..703414 FT /codon_start=1 FT /transl_table=11 FT /gene="acdA-4" FT /locus_tag="TGAM_0741" FT /product="Acetyl-CoA synthetase (ADP forming), alpha chain FT (acdA)" FT /EC_number="6.2.1.13" FT /db_xref="GOA:C5A4T1" FT /db_xref="InterPro:IPR003781" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR016102" FT /db_xref="UniProtKB/TrEMBL:C5A4T1" FT /inference="protein motif:CDD:CoA_binding, CoA binding FT domain" FT /inference="protein motif:CDD:COG1042, Acyl-CoA synthetase FT (NDP forming) [Energy production and conversion]" FT /inference="protein motif:CDD:SucD, Succinyl-CoA FT synthetase, alpha subunit [Energy production and FT conversion]" FT /inference="protein motif:COG:COG1042 Acyl-CoA synthetase FT (NDP forming); C Energy production and conversion" FT /inference="protein motif:Gene3D:G3D.3.40.50.261 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.720 no FT description" FT /inference="protein motif:HMMPanther:PTHR11117 SUCCINYL-COA FT SYNTHETASE-RELATED" FT /inference="protein motif:HMMPfam:PF02629 CoA_binding FT InterPro:IPR003781 CoA-binding" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /inference="protein motif:superfamily:SSF52210 Succinyl-CoA FT synthetase domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33243.1" FT /translation="MAEKIVEELRPFFDPKAVAIIGATNKKGKVGNVIFENFRMNKERG FT IFKGNIYPVNPKLDEIEGYKVYHSVEELPDDTDLAVISIPAPFVPDTMRQIAEKGIKAV FT IIITGGFGELGEEGKKLEREIYEIAKANGIRVIGPNCVGVYVPDTGVDTVFLPESKMDR FT PQSGPIAFVSQSGAFAAAMLDWAAMAGIGIGKMVSYGNKIDVDDADLMDYFIHDDGINV FT VTFYIEGVKDGRKFMESAKRITRVKPVIALKSGRTEYGAKAASSHTGSLAGADTIYDAV FT FKQTGIIRAEDFEHMFDLAKAFAALKDKLPKGDRIGIITDGGGAGVMASDAVAKFGLRM FT AELSEETIKFLKENFPPHAVAGNPTDVVGDTDAERYRVAIEGFVNDPNVDAILVIVLFQ FT VPLLEEEKIIDILAEYQKKSDKPIVAVAMGGKKTDRYARMLEEKGVPVYPTPERGVRAL FT AGLVRYAEYLKKVKGE" FT gene 703439..704200 FT /gene="acdB-1" FT /locus_tag="TGAM_0742" FT /note="tg0742" FT CDS 703439..704200 FT /codon_start=1 FT /transl_table=11 FT /gene="acdB-1" FT /locus_tag="TGAM_0742" FT /product="Acetyl-CoA synthetase (ADP forming), beta chain FT (acdB)" FT /EC_number="6.2.1.13" FT /db_xref="GOA:C5A4T2" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013650" FT /db_xref="InterPro:IPR013815" FT /db_xref="UniProtKB/TrEMBL:C5A4T2" FT /inference="protein motif:CDD:COG1042, Acyl-CoA synthetase FT (NDP forming) [Energy production and conversion]" FT /inference="protein motif:COG:COG0045 Succinyl-CoA FT synthetase, beta subunit; C Energy production and FT conversion" FT /inference="protein motif:Gene3D:G3D.3.30.470.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR11815 SUCCINYL-COA FT SYNTHETASE BETA CHAIN InterPro:IPR005809 Succinyl-CoA FT synthetase, beta subunit GO:Molecular Function:catalytic FT activity (GO:0003824), Biological Process:metabolism FT (GO:0008152)" FT /inference="protein motif:HMMPanther:PTHR11815:SF6 FT SUCCINYL-COA SYNTHETASE BETA CHAIN" FT /inference="protein motif:HMMPfam:PF08442 ATP-grasp_2 FT InterPro:IPR013650 ATP-grasp" FT /inference="protein motif:ProfileScan:PS50975 ATP_GRASP FT InterPro:IPR011761 ATP-grasp fold GO:Molecular FT Function:catalytic activity (GO:0003824)" FT /inference="protein motif:superfamily:SSF56059 Glutathione FT synthetase ATP-binding domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33244.1" FT /translation="MKEEALKVIESVLSQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTL FT DEALKYAEEIGYPVALKLMSPQILHKSDAKVVMLNIKSPEELKQKWEEIHENARKYRPD FT AEILGVLVAPMLRPGREIIIGVTEDPQFGHAIMFGLGGIFVEVLKDVTFRIIPITERDA FT RKMITEIKGYPILAGARGEEPADIDAIVDLLLKVSQLVDELRDYIKEMDLNPVFVYEKG FT KGAVIVDARIILKEPEEKKPEVSSEYKERCA" FT gene complement(704340..705338) FT /locus_tag="TGAM_0743" FT /note="tg0743" FT CDS complement(704340..705338) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0743" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR001107" FT /db_xref="UniProtKB/TrEMBL:C5A4T3" FT /inference="protein motif:CDD:Band_7, The band 7 domain of FT flotillin (reggie) like proteins" FT /inference="protein motif:CDD:Band_7_5, A subgroup of the FT band 7 domain of flotillin (reggie) like proteins" FT /inference="protein motif:CDD:COG4260, Putative virion core FT protein (lumpy skin disease virus) [Function unknown]" FT /inference="protein motif:superfamily:SSF57850 RING/U-box" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33245.1" FT /translation="MVQVIEWVNPGEDEIIWRYPNEVIKWGAQLIVHEYEVAVFMRDGK FT IYDVLGPGRHTLTTQNLPLLYKLVGGSNSPFKATVIFVSMKQFQGRYGGETQTRELAPV FT KYYGVYWFKVADPVLFITEVVGGQSLYDAQDVTKFIRAYFNEGMMKHLSTYSIVDLFQN FT LDVVSTQVKVKLMEDFRRLGLELVDVKIEGVNTTDEWRQRLFWLMQTGNAQAVMQMDTV FT KQVAAELGKSPGAGMGTGMVLVPQLFQQQAQPIPPAQPYAGGGTPPAPQQPQQAAPAQT FT QQQEICPYCGKPIPPGARFCPYCGHEIKRCPNGHIVPEGAKFCPVCGAKIE" FT gene complement(705341..705835) FT /locus_tag="TGAM_0744" FT /note="tg0744" FT CDS complement(705341..705835) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0744" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4T4" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33246.1" FT /translation="MGKETSIIEKLELIVPGFHGYKKKELLREDDRLIRGKVADLLAQA FT KRELERALQRCAMVNCNQLMAIEGMRKKLMMLESRIRHAEAGYRGYFDRVKFKEKELER FT LIEYDAKMIELAEGILNEAKALNAQIANPQALGMAVLGLDEKLVNLEEVLSQRMSFAAG FT E" FT gene complement(705845..706741) FT /locus_tag="TGAM_0745" FT /note="tg0745" FT CDS complement(705845..706741) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0745" FT /product="Conserved hypothetical protein" FT /note="Contains band 7 domain of flotillin (reggie) like FT proteins; 2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4T5" FT /inference="protein motif:COG:COG4260 Putative virion core FT protein (lumpy skin disease virus); S Function unknown" FT /inference="protein motif:superfamily:SSF57716 FT Glucocorticoid receptor-like (DNA-binding domain)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33247.1" FT /translation="MEVTCPTCSARFKVPDTVSIATCPYCGTTFHVQTGEESKVDHFFF FT PPMREDPAGKLLKFLSRQYGAPADIVDAKVTKKELHWVPVYFFYLHGRSKSRETVEEVE FT FLGIPAGSPFKTLLAEYPFPIRGKRFFDEAVVKKGKYYEPDVDREEAERIARSRLESAL FT KKEASEESAYAGELELNVKFQGLVHYPLWEIHYEYGGERFVNFVDGTDGRVIRAEYPLM FT SEARKKATLLGSGVIGSGLILGIIASAVGGSPWGIIGGLAGGVAGGIGIFMKGSVKKRT FT VSEVIKAGRGNVYFQPV" FT gene complement(706747..707745) FT /locus_tag="TGAM_0746" FT /note="tg0746" FT CDS complement(706747..707745) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0746" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4T6" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33248.1" FT /translation="MMTMEALAFKCERCGAPLEVSPETIVAVCPYCGFPNHVSGNIKTD FT EIHIIPSLDKNAIAQAFWKNVESDFDLRRIKDEIEIVGIEGHYAPYWIGLVHVYGTVRY FT MRREEECHTDSKGNTRCHTVERHYTESVDENLRLLGSARRQVKSFGVDDLITHYSKTWP FT KGKRLLDLEEGEWERIKLEILNTEMDERQAKLIMREDAIDVIRNRFLAKSDRIEMFNLH FT ADEPENVKLVLLPMWTVYYRYGNSIFQTVFAGWDGKRVAATEPMNVLRQAQYLVGAGAG FT IATAAFGAAFFSSSPVFALLAIVGGSAVSWLAGSKVLEGQRIERERKGLMG" FT gene complement(707853..708284) FT /gene="purE" FT /locus_tag="TGAM_0747" FT /note="tg0747" FT CDS complement(707853..708284) FT /codon_start=1 FT /transl_table=11 FT /gene="purE" FT /locus_tag="TGAM_0747" FT /product="Phosphoribosylaminoimidazole carboxylase, FT catalytic subunit (AIR carboxylase) (purE)" FT /EC_number="4.1.1.21" FT /db_xref="GOA:C5A4T7" FT /db_xref="InterPro:IPR000031" FT /db_xref="InterPro:IPR024694" FT /db_xref="UniProtKB/TrEMBL:C5A4T7" FT /inference="protein motif:BlastProDom:PD002193 FT PUR6_METJA_Q58033; InterPro:IPR000031 FT 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) FT carboxylase GO:Molecular FT Function:phosphoribosylaminoimidazole carboxylase activity FT (GO:0004638), Biological Process:'de novo' IMP biosynthesis FT (GO:0006189), Cellular FT Component:phosphoribosylaminoimidazole carboxylase complex FT (GO:0009320)" FT /inference="protein motif:CDD:AIRC, AIR carboxylase" FT /inference="protein motif:CDD:COG1691, NCAIR mutase FT (PurE)-related proteins [General function prediction only]" FT /inference="protein motif:CDD:PurE, FT Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase FT [Nucleotide transport and metabolism]" FT /inference="protein motif:COG:COG0041 FT Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; F FT Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.7700 no FT description" FT /inference="protein motif:HMMPfam:PF00731 AIRC FT InterPro:IPR000031 FT 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) FT carboxylase GO:Molecular FT Function:phosphoribosylaminoimidazole carboxylase activity FT (GO:0004638), Biological Process:'de novo' IMP biosynthesis FT (GO:0006189), Cellular FT Component:phosphoribosylaminoimidazole carboxylase complex FT (GO:0009320)" FT /inference="protein motif:HMMTigr:TIGR01162 FT purE:phosphoribosylaminoimidazole carboxyla FT InterPro:IPR000031 FT 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) FT carboxylase GO:Molecular FT Function:phosphoribosylaminoimidazole carboxylase activity FT (GO:0004638), Biological Process:'de novo' IMP biosynthesis FT (GO:0006189), Cellular FT Component:phosphoribosylaminoimidazole carboxylase complex FT (GO:0009320)" FT /inference="protein motif:superfamily:SSF52255 N5-CAIR FT mutase (phosphoribosylaminoimidazole carboxylase, PurE)" FT /protein_id="ACS33249.1" FT /translation="MKVLVVMGSKSDSHVAEKVTSVLDEFGVEYDIEVASAHRNPKKVE FT ELARKDYDVFIAIAGLSAALPGVIAAHTIKPVIGVPVSAKLGGLDALLSMAQLPPGVPV FT ATVGIDNGKNAALLAIEILALRDERLREKLKEHREKMRG" FT gene complement(708357..709106) FT /locus_tag="TGAM_0748" FT /note="tg0748" FT CDS complement(708357..709106) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0748" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4T8" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33250.1" FT /translation="MTLTLGIRELDEALGGIVERSLILIHEADPRSLGKFLAFEIMREK FT LESDNLVGYFNIGTPLSITLSVMEKAGVDWRRHLQEGRLMIIDTFGSIYDIKGDLENVW FT YLRKPIDIDTLNEKYIRVIGAHKQKWAEMGMFKGRELWGITVSMSDYLSIFTPKATQRY FT LEIADLQRSRSEIYKKYPAGTNVWTYTGEDTMVLPLLYRKADYVLKTESRIEDDKIKRY FT LHIVKAPELGDVTTLEYDFKGGRIHFQ" FT gene complement(709103..709903) FT /locus_tag="TGAM_0749" FT /note="tg0749" FT CDS complement(709103..709903) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0749" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4T9" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33251.1" FT /translation="MSFTIYMSKFLLFKVCFYINSARTYQLTSRLTPEDLFIHHKVFSH FT LDPSLQEGQTMDGEEKLMAIISESFLKGKIVGIVDRDFSAFTYIPALRSLKKPLEEGRY FT IWVVSYEPLQSLFRDFRRAGLDYESHLGKNLYVLDVFGSMRHIDSGVNGVFVLSGYLDD FT RVFILKYRTLIQDLLSELGPEDVIVVGYLESGMCRLFDNPIRAQKLLWNLREESRVKTA FT GLITYIKPECPALEEFIYLYSDYVFEGVVENGLRRVIMTKGDEE" FT gene 709902..711218 FT /gene="purD" FT /locus_tag="TGAM_0750" FT /note="tg0750" FT CDS 709902..711218 FT /codon_start=1 FT /transl_table=11 FT /gene="purD" FT /locus_tag="TGAM_0750" FT /product="Phosphoribosylamine--glycine ligase (purD)" FT /EC_number="6.3.4.13" FT /db_xref="GOA:C5A4U0" FT /db_xref="InterPro:IPR000115" FT /db_xref="InterPro:IPR011054" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR016185" FT /db_xref="InterPro:IPR020559" FT /db_xref="InterPro:IPR020560" FT /db_xref="InterPro:IPR020561" FT /db_xref="InterPro:IPR020562" FT /db_xref="UniProtKB/Swiss-Prot:C5A4U0" FT /inference="protein motif:CDD:GARS_A, FT Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain" FT /inference="protein motif:CDD:GARS_B, FT Phosphoribosylglycinamide synthetase, B domain" FT /inference="protein motif:CDD:GARS_C, FT Phosphoribosylglycinamide synthetase, C domain" FT /inference="protein motif:CDD:GARS_N, FT Phosphoribosylglycinamide synthetase, N domain" FT /inference="protein motif:CDD:PurD, FT Phosphoribosylamine-glycine ligase [Nucleotide transport FT and metabolism]" FT /inference="protein motif:COG:COG0151 FT Phosphoribosylamine-glycine ligase; F Nucleotide transport FT and metabolism" FT /inference="protein motif:Gene3D:G3D.2.30.35.30 no FT description" FT /inference="protein motif:Gene3D:G3D.3.30.470.20 no FT description" FT /inference="protein motif:Gene3D:G3D.3.40.50.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR10520 FT PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10520:SF1 FT PHOSPHORIBOSYLAMINE--GLYCINE LIGASE" FT /inference="protein motif:HMMPfam:PF01071 GARS_A FT InterPro:IPR000115 Phosphoribosylglycinamide synthetase FT GO:Molecular Function:phosphoribosylamine-glycine ligase FT activity (GO:0004637), Biological Process:purine base FT biosynthesis (GO:0009113)" FT /inference="protein motif:HMMPfam:PF02843 GARS_C FT InterPro:IPR000115 Phosphoribosylglycinamide synthetase FT GO:Molecular Function:phosphoribosylamine-glycine ligase FT activity (GO:0004637), Biological Process:purine base FT biosynthesis (GO:0009113)" FT /inference="protein motif:HMMPfam:PF02844 GARS_N FT InterPro:IPR000115 Phosphoribosylglycinamide synthetase FT GO:Molecular Function:phosphoribosylamine-glycine ligase FT activity (GO:0004637), Biological Process:purine base FT biosynthesis (GO:0009113)" FT /inference="protein motif:HMMTigr:TIGR00877 FT purD:phosphoribosylamine--glycine ligase InterPro:IPR000115 FT Phosphoribosylglycinamide synthetase GO:Molecular FT Function:phosphoribosylamine-glycine ligase activity FT (GO:0004637), Biological Process:purine base biosynthesis FT (GO:0009113)" FT /inference="protein motif:ProfileScan:PS50975 ATP_GRASP FT InterPro:IPR011761 ATP-grasp fold GO:Molecular FT Function:catalytic activity (GO:0003824)" FT /inference="protein motif:ScanRegExp:PS00184 GARS FT InterPro:IPR000115 Phosphoribosylglycinamide synthetase FT GO:Molecular Function:phosphoribosylamine-glycine ligase FT activity (GO:0004637), Biological Process:purine base FT biosynthesis (GO:0009113)" FT /inference="protein motif:superfamily:SSF51246 Rudiment FT single hybrid motif InterPro:IPR011054 Rudiment single FT hybrid motif" FT /inference="protein motif:superfamily:SSF52440 PreATP-grasp FT domain" FT /inference="protein motif:superfamily:SSF56059 Glutathione FT synthetase ATP-binding domain-like" FT /protein_id="ACS33252.1" FT /translation="MRVLLVGGGGREHAIGEALVRGGAELYVVSKHKNPGLARLARGYG FT LAKETDIKKVLEYAEKFGVELAFIGPEAPLEKGIVDALEENGIPAVGPSREAAKLETDK FT AFARTFMERNEIPGRKVFRVFTDVSKMRSWVDDFGRPVVVKPIGLTGGKGVKVVGYQLR FT DNEEAKSYAEELIRRDGRVLIEERTNGVEFTFQVFTDGKRVLPMPLAQDYPHAYENDEG FT PITGGMGSYSCSNGLLPFVTREDYEKALETLKATVEAMRKEGTPYKGILYGQFMLSKGG FT PVLIEYNARFGDPEAINVLPLLETSLLEVAEGIVDGNLQGAEFEKKATVVKYLAPKGYP FT TNPVRGVKVEVNEKAVEEVGARLYYASIDENFTLLGSRAIAVVGIADSLEEAERIAKSV FT IPHVKGELFYRRDVGTRKSVEKRIELMKEFGKEFEPNPC" FT gene 711229..712371 FT /gene="purP" FT /locus_tag="TGAM_0751" FT /note="tg0751" FT CDS 711229..712371 FT /codon_start=1 FT /transl_table=11 FT /gene="purP" FT /locus_tag="TGAM_0751" FT /product="IMP biosynthesis enzyme FT (5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl FT 5'-monophosphate synthetase) (purP)" FT /EC_number="6.3.4.-" FT /db_xref="GOA:C5A4U1" FT /db_xref="InterPro:IPR009720" FT /db_xref="InterPro:IPR010672" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="UniProtKB/TrEMBL:C5A4U1" FT /inference="protein motif:CDD:COG1759, ATP-utilizing FT enzymes of ATP-grasp superfamily (probably carboligases) FT [General function prediction only]" FT /inference="protein motif:CDD:DUF1246, Protein of unknown FT function (DUF1246)" FT /inference="protein motif:CDD:DUF1297, Protein of unknown FT function (DUF1297)" FT /inference="protein motif:COG:COG1759 ATP-utilizing enzymes FT of ATP-grasp superfamily (probably carboligases); R General FT function prediction only" FT /inference="protein motif:Gene3D:G3D.3.30.470.20 no FT description" FT /inference="protein motif:HMMPfam:PF06849 DUF1246 FT InterPro:IPR010672 Protein of unknown function DUF1246" FT /inference="protein motif:HMMPfam:PF06973 DUF1297 FT InterPro:IPR009720 Protein of unknown function DUF1297" FT /inference="protein motif:superfamily:SSF56059 Glutathione FT synthetase ATP-binding domain-like" FT /protein_id="ACS33253.1" FT /translation="MISRDEILGILERYDPEKITVGVLGSHSALDIADGAKEEGLPVLV FT VAQRGRHKTYAEYFRLRKTRDGITKGFIDEVIVLEKFARIIDVQDELVKRNVIFVPNRS FT FVVYTGIDRVENDFKVPLFGSRNLLRSEERSEEKSYYWLLEKAGLPYPEPVKPEEIDEV FT GLVIVKLPHAKKRLERGFFTAASYKEFREKAEKLIKLGVITEEDLARARIERYIIGPVF FT NFDFFYSPIDGEIELLGIDWRFETSLDGHVRLPAAQQLTLPEWQFEPEYTVTGHASSTL FT RESLLEKVFDMAEKYVKATQEYYSPGIIGPFTLQTAVDKDLNFYIYDVAPRTGGGTNIH FT MAMGHPYGNALWRKPMSTGRRVALEIKRAIELDELERVVT" FT gene 712440..713129 FT /locus_tag="TGAM_0752" FT /note="tg0752" FT CDS 712440..713129 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0752" FT /product="Hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4U2" FT /protein_id="ACS33254.1" FT /translation="MRKVVGVLLLIGLIATVCVFFTHSAHYGKKNNPIDFRPVYLSNVS FT LNARFSNEGPGILVVQYSDIEKAPINLSKPVLVVGEINVTRLLITFNITTPLASIEPSP FT KAVFVYNRGLLFLESGDVRKFLVWTREVIRYEAHWSFGIYSEHSGILLAVRSSHIEPPK FT NWSSVGGTLPEYFVSVEITVPGNENVELSLVPLNGKLSNYHPTTSKGQTSPSTTGRAFS FT GTPRRGQ" FT gene 713396..714592 FT /locus_tag="TGAM_0753" FT /note="tg0753" FT CDS 713396..714592 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0753" FT /product="Permease of the major facilitator family, FT putative" FT /note="12 probable transmembrane helices predicted by FT modhmm" FT /db_xref="GOA:C5A4U3" FT /db_xref="InterPro:IPR011701" FT /db_xref="InterPro:IPR016196" FT /db_xref="UniProtKB/TrEMBL:C5A4U3" FT /inference="protein motif:COG:COG0477 Permeases of the FT major facilitator superfamily; G Carbohydrate transport and FT metabolism" FT /inference="protein motif:HMMPanther:PTHR11662 FT SODIUM-DEPENDENT PHOSPHATE TRANSPORTER" FT /inference="protein motif:HMMPfam:PF07690 MFS_1 FT InterPro:IPR011701 Major facilitator superfamily MFS_1" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33255.1" FT /translation="MDNRWRTVILNTLVVASGFGTMHMLEKFKDAVVNHYGITETMMGY FT QQTAYVVGLFVAFLLGGTTLFKGSFKRSVALIVSFAAIPQFLIPFMPNWWGVVALRFFQ FT GFIVALIAVFSNQIGRLFVAERPFAKGIILSGIFWGGIYGISLAKWADGSDASWSSVTQ FT AFLISAVLMYVMLAIWWFFTEDFEIPKEKRSSKANVWKMPFTWVFGFTFFPALWIIFTL FT GSFTLHNVDFSEAQVANLVRALEVSMGLWSIIMGYLGYRLSRGNPSNRGLFKAIVSVMT FT LSYAVTFLGIFIVWKAILANDYTLALIGIAITGIVQGTGPAFWTTAPAAYPREIYPEAS FT FALGLISNSANAVAPNVMFVLVHSVNTGMVIYLLMAALGIATLLLSSRMKLPVEELSG" FT gene 714675..714917 FT /gene="purS" FT /locus_tag="TGAM_0754" FT /note="tg0754" FT CDS 714675..714917 FT /codon_start=1 FT /transl_table=11 FT /gene="purS" FT /locus_tag="TGAM_0754" FT /product="Phosphoribosylformylglycinamidine (FGAM) FT synthase, PurS component (purS)" FT /EC_number="6.3.5.3" FT /db_xref="GOA:C5A4U4" FT /db_xref="InterPro:IPR003850" FT /db_xref="UniProtKB/TrEMBL:C5A4U4" FT /inference="protein motif:BlastProDom:PD010362 FT Q9UXW4_PYRAB_Q9UXW4; InterPro:IPR003850 FT Phosphoribosylformylglycinamidine synthetase PurS" FT /inference="protein motif:CDD:PurC, FT Phosphoribosylformylglycinamidine (FGAM) synthase" FT /inference="protein motif:CDD:PurS, FT Phosphoribosylformylglycinamidine (FGAM) synthase, PurS FT component [Nucleotide transport and metabolism]" FT /inference="protein motif:COG:COG1828 FT Phosphoribosylformylglycinamidine (FGAM) synthase, PurS FT component; F Nucleotide transport and metabolism" FT /inference="protein motif:HMMPfam:PF02700 PurS FT InterPro:IPR003850 Phosphoribosylformylglycinamidine FT synthetase PurS" FT /inference="protein motif:HMMPIR:PIRSF005633 FT Formylglycinamide ribonucleotide amidotransferase, PurS FT component" FT /inference="protein motif:HMMTigr:TIGR00302 FT TIGR00302:phosphoribosylformylglycinamidin FT InterPro:IPR003850 Phosphoribosylformylglycinamidine FT synthetase PurS" FT /inference="protein motif:superfamily:SSF82697 PurS subunit FT of FGAM synthetase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33256.1" FT /translation="MKWRVTVTVRLKEGLNDPEGRVIGKALRNLGYAVDGLRVPKCFEF FT ELESERPEEEVEEMCRKLLANPLIHSWEYRIEPVS" FT gene 714919..715590 FT /gene="purQ" FT /locus_tag="TGAM_0755" FT /note="tg0755" FT CDS 714919..715590 FT /codon_start=1 FT /transl_table=11 FT /gene="purQ" FT /locus_tag="TGAM_0755" FT /product="Phosphoribosylformylglycinamidine synthase I, FT purQ component (purQ)" FT /EC_number="6.3.5.3" FT /db_xref="GOA:C5A4U5" FT /db_xref="InterPro:IPR010075" FT /db_xref="InterPro:IPR017926" FT /db_xref="UniProtKB/TrEMBL:C5A4U5" FT /inference="protein motif:CDD:DJ-1_PfpI, DJ-1/PfpI family" FT /inference="protein motif:CDD:GATase1, Type 1 glutamine FT amidotransferase (GATase1)-like domain" FT /inference="protein motif:CDD:GATase1_FGAR_AT, Type 1 FT glutamine amidotransferase (GATase1)-like domain found in FT Formylglycinamide ribonucleotide amidotransferase FT (FGAR-AT)" FT /inference="protein motif:CDD:GATase1_IGP_Synthase, Type 1 FT glutamine amidotransferase (GATase1) domain found in FT imidazole glycerol phosphate synthase (IGPS)" FT /inference="protein motif:CDD:GAT_1, Type 1 glutamine FT amidotransferase (GATase1)-like domain" FT /inference="protein motif:CDD:HisH, Glutamine FT amidotransferase [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PurL, FT Phosphoribosylformylglycinamidine (FGAM) synthase, FT glutamine amidotransferase domain [Nucleotide transport and FT metabolism]" FT /inference="protein motif:COG:COG0047 FT Phosphoribosylformylglycinamidine (FGAM) synthase, FT glutamine amidotransferase domain; F Nucleotide transport FT and metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.880 no FT description" FT /inference="protein motif:HMMPanther:PTHR10099 FT PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10099:SF2 FT PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE FT InterPro:IPR010075 Phosphoribosylformylglycinamidine FT synthase I GO:Molecular FT Function:phosphoribosylformylglycinamidine synthase FT activity (GO:0004642), Cellular Component:cytoplasm FT (GO:0005737), Biological Process:'de novo' IMP biosynthesis FT (GO:0006189)" FT /inference="protein motif:HMMPfam:PF00117 GATase FT InterPro:IPR000991 Glutamine amidotransferase class-I FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMTigr:TIGR01737 FT FGAM_synth_I:phosphoribosylformylglycin InterPro:IPR010075 FT Phosphoribosylformylglycinamidine synthase I GO:Molecular FT Function:phosphoribosylformylglycinamidine synthase FT activity (GO:0004642), Cellular Component:cytoplasm FT (GO:0005737), Biological Process:'de novo' IMP biosynthesis FT (GO:0006189)" FT /inference="protein motif:ScanRegExp:PS00442 GATASE_TYPE_I FT InterPro:IPR012998 Glutamine amidotransferase, class I, FT active site" FT /inference="protein motif:superfamily:SSF52317 Class I FT glutamine amidotransferase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33257.1" FT /translation="MVRFAVVVFPGTNCDFETERAIRKAGAEAERVWYRASLKDFDGVV FT LPGGFSYADYLRAGAIAARQKIMEEVKEFAEEGRPVLGICNGFQILTEAGLLPGALRPN FT RVPRFLCRWVHLRVNDVETPFTSLYEPGEVIRMPIAHAEGNYYIDDPSKVRIVFQYSDE FT NGNVSEEVNPNGSVLNIAAIANERGNVLGTMPHPERASDRFLGSEDGLRLFKSMVEWAR FT R" FT gene 715595..717733 FT /gene="purL" FT /locus_tag="TGAM_0756" FT /note="tg0756" FT CDS 715595..717733 FT /codon_start=1 FT /transl_table=11 FT /gene="purL" FT /locus_tag="TGAM_0756" FT /product="Phosphoribosylformylglycinamidine synthase II, FT purL component (purL)" FT /EC_number="6.3.5.3" FT /db_xref="GOA:C5A4U6" FT /db_xref="InterPro:IPR000728" FT /db_xref="InterPro:IPR010074" FT /db_xref="InterPro:IPR010918" FT /db_xref="InterPro:IPR016188" FT /db_xref="UniProtKB/Swiss-Prot:C5A4U6" FT /inference="protein motif:COG:COG0046 FT Phosphoribosylformylglycinamidine (FGAM) synthase, FT synthetase domain; F Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.30.70.460 no FT description" FT /inference="protein motif:HMMPanther:PTHR10099 FT PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE-RELATED" FT /inference="protein motif:HMMPanther:PTHR10099:SF3 FT PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE II FT InterPro:IPR010074 Phosphoribosylformylglycinamidine FT synthase II GO:Molecular FT Function:phosphoribosylformylglycinamidine synthase FT activity (GO:0004642), Cellular Component:cytoplasm FT (GO:0005737), Biological Process:'de novo' IMP biosynthesis FT (GO:0006189)" FT /inference="protein motif:HMMPfam:PF00586 AIRS FT InterPro:IPR000728 AIR synthase related protein FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMPfam:PF02769 AIRS_C FT InterPro:IPR010918 AIR synthase related protein, FT C-terminal" FT /inference="protein motif:HMMTigr:TIGR01736 FT FGAM_synth_II:phosphoribosylformylglyc InterPro:IPR010074 FT Phosphoribosylformylglycinamidine synthase II GO:Molecular FT Function:phosphoribosylformylglycinamidine synthase FT activity (GO:0004642), Cellular Component:cytoplasm FT (GO:0005737), Biological Process:'de novo' IMP biosynthesis FT (GO:0006189)" FT /inference="protein motif:superfamily:SSF55326 FT Aminoimidazole ribonucleotide synthetase (PurM) N-terminal FT domain" FT /inference="protein motif:superfamily:SSF56042" FT /protein_id="ACS33258.1" FT /translation="MFPHEEKLIRERLGREPNELEWAMLEVMWSEHASYKSSRPWLKLL FT PTENEHVILGPGEDAGIVKFDDETWVVVGIESHNHPSAVEPYGGAATGVGGIVRDILCM FT GARPIALLDPIRFGPLEKERNRYLFEYVVKGIADYGNRIGVPTVGGETEFDESLDSYTL FT VNVACVGIMRPEHLVHSYVTEAGLKLILVGNRTGRDGVHGVTFASEELSENTEEDRSAV FT QIPDPFTEKLLIEATLEAVYTGRVKALKDLGGGGLTCAASEMAGKKGFGAVIYADRVPL FT REPGMTPTEVMISESQERMLFAVKPEDVEEIGRIFEEYELEWTVVGETIEEPRFVVYWK FT GEKVADLPIELLTEVPTIEWELKPYSAEGPVETPDVPFERAFDLVWGSPNILSKRWVWE FT QYDHEVQGRTVLKPGRDAAVLKINDEYGLAFVADGNPNHSYLNPYQGAMGAVAEVVRNL FT VSVGAEPLALVDNLNFASPERPEVYWSFAETVRGLADAARAFGLAYVSGNVSFYNEVVD FT RPIKPTPVVAGLGKVKLEAIPNGGFEEGLLIGVVGLTKPELGGSELFARLGVEGGLAPR FT VNLEEEKANANGVLEAIRRGLVRAVHDVSRGGLAVALAKMAVAGNTGFTADLSKVPSET FT TNPIEVAFSESHGRYIVAFPEENLEELKGLFKHFVIIGRTGGSDAVFLWNGWELLRKPV FT SELKAVHESLPMLLGEEE" FT gene 717730..718725 FT /locus_tag="TGAM_0757" FT /note="tg0757" FT CDS 717730..718725 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0757" FT /product="Carboligase of the ATP-grasp superfamily, FT putative" FT /note="Contains 1 DUF1246 domain in Nterm and 1 DUF1297 FT domain in Ctrem" FT /db_xref="GOA:C5A4U7" FT /db_xref="InterPro:IPR009720" FT /db_xref="InterPro:IPR010672" FT /db_xref="InterPro:IPR011761" FT /db_xref="InterPro:IPR013815" FT /db_xref="InterPro:IPR013816" FT /db_xref="InterPro:IPR013817" FT /db_xref="InterPro:IPR023656" FT /db_xref="UniProtKB/TrEMBL:C5A4U7" FT /inference="protein motif:CDD:COG1759, ATP-utilizing FT enzymes of ATP-grasp superfamily (probably carboligases) FT [General function prediction only]" FT /inference="protein motif:CDD:DUF1246, Protein of unknown FT function (DUF1246)" FT /inference="protein motif:CDD:DUF1297, Protein of unknown FT function (DUF1297)" FT /inference="protein motif:COG:COG1759 ATP-utilizing enzymes FT of ATP-grasp superfamily (probably carboligases); R General FT function prediction only" FT /inference="protein motif:Gene3D:G3D.3.30.470.20 no FT description" FT /inference="protein motif:HMMPfam:PF06849 DUF1246 FT InterPro:IPR010672 Protein of unknown function DUF1246" FT /inference="protein motif:HMMPfam:PF06973 DUF1297 FT InterPro:IPR009720 Protein of unknown function DUF1297" FT /inference="protein motif:ProfileScan:PS50975 ATP_GRASP FT InterPro:IPR011761 ATP-grasp fold GO:Molecular FT Function:catalytic activity (GO:0003824)" FT /inference="protein motif:superfamily:SSF56059 Glutathione FT synthetase ATP-binding domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33259.1" FT /translation="MRIATYASHSALQILKGAKQEGFETVAFGKARVRPLYTKYFPVAD FT YFLEGSYPEEELLNLDAVVIPTGSFVAHLGVELVERMRVPHYGNKEVLKWESDRSLERK FT WLEEAKLRLPRVYDDPDEVDRPVIVKPFGAKGGKGYFLAKSPEDFWRKAERLGIRDKED FT LGEVQIQEYVVGVPVYPHYFYSKLNRELELMSIDRRYESNADAIGRIPAKEQLDIEVNT FT NYTVIGNIPIVLRESLLMDVIEAGERVVKTAEKLMGGLWGPFCLEGVFTEDLEFVVFEI FT SARIVAGTNPFVHGSPYSWLRYDFPVSTGRRIAMELREALEEGRLDEIVT" FT gene complement(718718..719782) FT /locus_tag="TGAM_0758" FT /note="tg0758" FT CDS complement(718718..719782) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0758" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF835 family; 6 probable transmembrane FT helices predicted by modhmm" FT /db_xref="InterPro:IPR008553" FT /db_xref="UniProtKB/TrEMBL:C5A4U8" FT /inference="protein motif:CDD:DUF835, Protein of unknown FT function (DUF835)" FT /inference="protein motif:HMMPfam:PF05763 DUF835 FT InterPro:IPR008553 Protein of unknown function DUF835" FT /protein_id="ACS33260.1" FT /translation="MGAKMDYAFVTAAFSIAIKLVAGGMILFFAEVKHRKTSLPWGLAW FT IAYAYAIAGDISGNYIIGAMSVAIFASLIFYGTTRLIGAEFYIGKVSRIIALLPMFFVI FT LLVSGALMLPRNLNLLIMGVSHAVSGLFMILSGFLLLELREIYGKKANNLGITLIIYGI FT HQVDYLALRNEQGFATVGFVLGLILTVVSALLMIQFVLVTPFGPKSARVHEKIQKGVLI FT LRLESIEGYMDLLRDYPVLAFVRTISTPNKWTTFKLSNVPGKLTIEPTNLPRILETAVE FT YMKRAREDGDSFRPVILIEGLEYLRLYNDFSSIAKFLATLKDYVSVNEGTLIVVLDEKA FT WEKKEFHLLTRILT" FT gene 719873..721330 FT /gene="guaB" FT /locus_tag="TGAM_0759" FT /note="tg0759" FT CDS 719873..721330 FT /codon_start=1 FT /transl_table=11 FT /gene="guaB" FT /locus_tag="TGAM_0759" FT /product="Inosine-5'-monophosphate dehydrogenase (IMP FT dehydrogenase) (IMPDH) (IMPD) (guaB)" FT /EC_number="1.1.1.205" FT /db_xref="GOA:C5A4U9" FT /db_xref="InterPro:IPR000644" FT /db_xref="InterPro:IPR001093" FT /db_xref="InterPro:IPR005990" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR015875" FT /db_xref="InterPro:IPR018529" FT /db_xref="UniProtKB/TrEMBL:C5A4U9" FT /inference="protein motif:CDD:COG0517, FOG:CBS domain FT [General function prediction only]" FT /inference="protein motif:CDD:COG2524, Predicted FT transcriptional regulator, contains C-terminal CBS domains FT [Transcription]" FT /inference="protein motif:CDD:COG2905, Predicted FT signal-transduction protein containing cAMP-binding and CBS FT domains [Signal transduction mechanisms]" FT /inference="protein motif:CDD:COG3448, FT CBS-domain-containing membrane protein [Signal transduction FT mechanisms]" FT /inference="protein motif:CDD:COG3620, Predicted FT transcriptional regulator with C-terminal CBS domains FT [Transcription]" FT /inference="protein motif:CDD:GuaB, IMP dehydrogenase/GMP FT reductase [Nucleotide transport and metabolism]" FT /inference="protein motif:CDD:IMPDH, IMP dehydrogenase / FT GMP reductase domain" FT /inference="protein motif:CDD:MgtE, Mg/Co/Ni transporter FT MgtE (contains CBS domain) [Inorganic ion transport and FT metabolism]" FT /inference="protein motif:COG:COG0516 IMP dehydrogenase/GMP FT reductase; F Nucleotide transport and metabolism" FT /inference="protein motif:Gene3D:G3D.3.20.20.90 no FT description" FT /inference="protein motif:HMMPanther:PTHR11911 FT INOSINE/GUANOSINE-5'-MONOPHOSPHATE DEHYDROGENASE" FT /inference="protein motif:HMMPanther:PTHR11911:SF2 FT INOSINE-5-MONOPHOSPHATE DEHYDROGENASE" FT /inference="protein motif:HMMPfam:PF00478 IMPDH FT InterPro:IPR001093 IMP dehydrogenase/GMP reductase FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMPfam:PF00571 CBS FT InterPro:IPR000644 CBS" FT /inference="protein motif:HMMPIR:PIRSF000130 FT Inosine-5'-monophosphate dehydrogenase" FT /inference="protein motif:HMMSmart:SM00116 no description FT InterPro:IPR000644 CBS" FT /inference="protein motif:HMMTigr:TIGR01302 FT IMP_dehydrog:inosine-5'-monophosphate d InterPro:IPR005990 FT IMP dehydrogenase GO:Molecular Function:IMP dehydrogenase FT activity (GO:0003938), Biological Process:GMP biosynthesis FT (GO:0006177)" FT /inference="protein motif:ProfileScan:PS50147 SNF4_REP FT InterPro:IPR000644 CBS" FT /inference="protein motif:ProfileScan:PS50264 FMN_ENZYMES FT InterPro:IPR003009 FMN/related compound-binding core" FT /inference="protein motif:ScanRegExp:PS00487 IMP_DH_GMP_RED FT InterPro:IPR001093 IMP dehydrogenase/GMP reductase FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:superfamily:SSF51412 Inosine FT monophosphate dehydrogenase (IMPDH)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33261.1" FT /translation="MGKFEHKLVNAIRGYTFDDVLLIPQPTEVEPKDVDVSTRITPKIR FT LNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMSIEEQVEQVKKVKRAERFIVEDVI FT SISPDETVDYAIFLMERNDIDGLPVVEDGKVVGVISKKDIAVKQGKLVRDIMTGEPITV FT PENVTAEEALTLMFEHRIDRLPVVNSEGKLVGIITMSDLAKRRKWKNAVRDENGDLVVA FT AAVGPFDLERAKALDRAGADVIVIDTAHAHNLKAIKAMKEIRKAVDADIIVGNIANPKA FT VDDLTFADAVKVGIGPGSICTTRVVAGVGVPQITAIALVADRASEYGLHVIADGGIRYS FT GDIVKAIAAGADAVMLGSLLAGTKEAPGKEVVINGRRYKQYRGMGSLGAMMKGGAERYY FT QKGHMKTRKFVPEGVEGVVPYKGSVSDVIYQLIGGLRSGMGYVGAKNIEELKEKGEFVI FT VTQAGVRESHPHDILITNEAPNYPINK" FT gene 721380..722315 FT /gene="guaA_C" FT /locus_tag="TGAM_0760" FT /note="tg0760" FT CDS 721380..722315 FT /codon_start=1 FT /transl_table=11 FT /gene="guaA_C" FT /locus_tag="TGAM_0760" FT /product="GMP synthase [glutamine-hydrolyzing] FT pyrophosphatase subunit (C terminal domain) (guaA_C)" FT /EC_number="6.3.5.2" FT /db_xref="GOA:C5A4V0" FT /db_xref="InterPro:IPR001674" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR022310" FT /db_xref="UniProtKB/TrEMBL:C5A4V0" FT /inference="protein motif:CDD:Alpha_ANH_like_I, This is a FT subfamily of Adenine nucleotide alpha hydrolases FT superfamily" FT /inference="protein motif:CDD:COG1606, ATP-utilizing FT enzymes of the PP-loop superfamily [General function FT prediction only]" FT /inference="protein motif:CDD:GMP_synthase_C, The FT C-terminal domain of GMP synthetase" FT /inference="protein motif:CDD:GMP_synt_C, GMP synthase C FT terminal domain" FT /inference="protein motif:CDD:GuaA, GMP synthase, PP-ATPase FT domain/subunit [Nucleotide transport and metabolism]" FT /inference="protein motif:CDD:MesJ, Predicted ATPase of the FT PP-loop superfamily implicated in cell cycle control [Cell FT division and chromosome partitioning]" FT /inference="protein motif:CDD:NAD_synthase, NAD+ synthase FT is a homodimer, which catalyzes the final step in de novo FT nicotinamide adenine dinucleotide (NAD+) biosynthesis, an FT amide transfer from either ammonia or glutamine to FT nicotinic acid adenine dinucleotide (NaAD)" FT /inference="protein motif:CDD:TrmU, Predicted FT tRNA(5-methylaminomethyl-2-thiouridylate) FT methyltransferase, contains the PP-loop ATPase domain FT [Translation, ribosomal structure and biogenesis]" FT /inference="protein motif:COG:COG0519 GMP synthase, FT PP-ATPase domain/subunit; F Nucleotide transport and FT metabolism" FT /inference="protein motif:Gene3D:G3D.3.40.50.610 no FT description" FT /inference="protein motif:HMMPanther:PTHR11922 GMP FT SYNTHASE" FT /inference="protein motif:HMMPanther:PTHR11922:SF1 GMP FT SYNTHASE" FT /inference="protein motif:HMMPfam:PF00958 GMP_synt_C FT InterPro:IPR001674 GMP synthase, C-terminal GO:Molecular FT Function:GMP synthase (glutamine-hydrolyzing) activity FT (GO:0003922), Molecular Function:ATP binding (GO:0005524), FT Biological Process:purine nucleotide biosynthesis FT (GO:0006164), Biological Process:GMP biosynthesis FT (GO:0006177)" FT /inference="protein motif:HMMPfam:PF02540 NAD_synthase FT InterPro:IPR003694 NAD+ synthase GO:Molecular Function:NAD+ FT synthase (glutamine-hydrolyzing) activity (GO:0003952), FT Molecular Function:ATP binding (GO:0005524), Biological FT Process:NAD biosynthesis (GO:0009435)" FT /inference="protein motif:HMMTigr:TIGR00884 guaA_Cterm:GMP FT synthase, C-terminal domai InterPro:IPR001674 GMP synthase, FT C-terminal GO:Molecular Function:GMP synthase FT (glutamine-hydrolyzing) activity (GO:0003922), Molecular FT Function:ATP binding (GO:0005524), Biological FT Process:purine nucleotide biosynthesis (GO:0006164), FT Biological Process:GMP biosynthesis (GO:0006177)" FT /inference="protein motif:superfamily:SSF52402 Adenine FT nucleotide alpha hydrolases-like" FT /inference="protein motif:superfamily:SSF54810 GMP FT synthetase C-terminal dimerisation domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33262.1" FT /translation="MVMFMWKDFIREKVEEIRETVGDGKAIIALSGGVDSSTAAVLAHK FT AIGDRLHAVFVNTGFMRKGEPEFVVKTFRDEFGLNLHYVDASERFFKALKGVTDPEEKR FT KIIGRVFIEVFEEIAKEINADFLIQGTIAPDWIESKGKIKSHHNVGGLPERLNLKLIEP FT LRDLYKDEVRELAKELGLPEKIYNRMPFPGPGLAVRVLGEVTPEKIAIVREANAIVEEE FT IEKAGLRPWQAFAVLLGVKTVGVQGDIRAYKETIAVRVVESLDGMTANAMNVPFEVLQR FT IAFRITSEIPEVGRVLYDITNKPPATIEFE" FT gene 722312..722566 FT /locus_tag="TGAM_0761" FT /note="tg0761" FT CDS 722312..722566 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0761" FT /product="Conserved hypothetical protein" FT /db_xref="InterPro:IPR008203" FT /db_xref="InterPro:IPR024069" FT /db_xref="UniProtKB/TrEMBL:C5A4V1" FT /inference="protein motif:COG:COG2880 Uncharacterized FT protein conserved in archaea; S Function unknown" FT /inference="protein motif:HMMPfam:PF01954 DUF104 FT InterPro:IPR008203 Protein of unknown function DUF104" FT /protein_id="ACS33263.1" FT /translation="MKAYLPPFPTLSGGSMGEIIEVIYENGVLKPLKPLKLKEGQRLRV FT RIYHEDFLELAREMRKRVTPEKFREDPTDYLLRLREEET" FT gene 722563..723009 FT /locus_tag="TGAM_0762" FT /note="tg0762" FT CDS 722563..723009 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0762" FT /product="Nucleotide binding protein, putative, containing FT PIN domain" FT /db_xref="InterPro:IPR002716" FT /db_xref="InterPro:IPR006596" FT /db_xref="UniProtKB/TrEMBL:C5A4V2" FT /inference="protein motif:COG:COG1848 Predicted nucleic FT acid-binding protein, contains PIN domain; R General FT function prediction only" FT /inference="protein motif:HMMPfam:PF01850 PIN FT InterPro:IPR002716 PilT protein, N-terminal" FT /inference="protein motif:HMMSmart:SM00670 no description FT InterPro:IPR006596 Nucleotide binding protein, PINc" FT /inference="protein motif:superfamily:SSF88723 PIN FT domain-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33264.1" FT /translation="MKVVVDTSVVFHLFSSFYPERAEVAERIIEYAQLGSLELYAPRLG FT EVEFVAVLSRYFEREQVEKALTYYSEIVAWVPEELLIEELREVAFQTHHKASDIYFIAT FT ARYLDGVLVTNDRKMAELAKSLGLRAFYLVEEHDAFFKLLEVGS" FT gene 723006..723572 FT /gene="guaA_N" FT /locus_tag="TGAM_0763" FT /note="tg0763" FT CDS 723006..723572 FT /codon_start=1 FT /transl_table=11 FT /gene="guaA_N" FT /locus_tag="TGAM_0763" FT /product="GMP synthase-glutamine amidotransferase subunit FT (N terminal domain) (guaA_N)" FT /EC_number="6.3.5.2" FT /db_xref="GOA:C5A4V3" FT /db_xref="InterPro:IPR004739" FT /db_xref="InterPro:IPR017926" FT /db_xref="InterPro:IPR023686" FT /db_xref="UniProtKB/TrEMBL:C5A4V3" FT /inference="protein motif:CDD:CarA, Carbamoylphosphate FT synthase small subunit [Amino acid transport and metabolism FT / Nucleotide transport and metabolism]" FT /inference="protein motif:CDD:COG2071, Predicted glutamine FT amidotransferases [General function prediction only]" FT /inference="protein motif:CDD:GATase, Glutamine FT amidotransferase class-I" FT /inference="protein motif:CDD:GATase1_1, This group FT contains a subgroup of proteins having the Type 1 glutamine FT amidotransferase (GATase1) domain" FT /inference="protein motif:CDD:GATase1_2, This group FT contains a subgroup of proteins having the Type 1 glutamine FT amidotransferase (GATase1) domain" FT /inference="protein FT motif:CDD:GATase1_Anthranilate_Synthase, Type 1 glutamine FT amidotransferase (GATase1) domain found in Anthranilate FT synthase (ASase)" FT /inference="protein motif:CDD:GATase1_CPSase, This group of FT sequences represents the small chain of the FT glutamine-dependent form of carbamoyl phosphate synthase, FT CPSase II" FT /inference="protein motif:CDD:GATase1_GMP_Synthase, Type 1 FT glutamine amidotransferase (GATase1) domain found in GMP FT synthetase" FT /inference="protein motif:CDD:GATase1_IGP_Synthase, Type 1 FT glutamine amidotransferase (GATase1) domain found in FT imidazole glycerol phosphate synthase (IGPS)" FT /inference="protein motif:CDD:GuaA, GMP synthase - FT Glutamine amidotransferase domain [Nucleotide transport and FT metabolism]" FT /inference="protein motif:CDD:HisH, Glutamine FT amidotransferase [Amino acid transport and metabolism]" FT /inference="protein motif:CDD:PabA, FT Anthranilate/para-aminobenzoate synthases component II FT [Amino acid transport and metabolism / Coenzyme FT metabolism]" FT /inference="protein motif:COG:COG0518 GMP synthase - FT Glutamine amidotransferase domain; F Nucleotide transport FT and metabolism" FT /inference="protein motif:FPrintScan:PR00096 GATASE FT InterPro:IPR011702 Glutamine amidotransferase superfamily FT GO:Molecular Function:catalytic activity (GO:0003824), FT Biological Process:glutamine metabolism (GO:0006541)" FT /inference="protein motif:FPrintScan:PR00097 ANTSNTHASEII FT InterPro:IPR006220 Anthranilate synthase component II/delta FT crystallin GO:Molecular Function:catalytic activity FT (GO:0003824), Biological Process:biosynthesis (GO:0009058)" FT /inference="protein motif:FPrintScan:PR00099 CPSGATASE FT InterPro:IPR001317 Carbamoyl-phosphate synthase, GATase FT region" FT /inference="protein motif:Gene3D:G3D.3.40.50.880 no FT description" FT /inference="protein motif:HMMPanther:PTHR11922 GMP FT SYNTHASE" FT /inference="protein motif:HMMPanther:PTHR11922:SF1 GMP FT SYNTHASE" FT /inference="protein motif:HMMPfam:PF00117 GATase FT InterPro:IPR000991 Glutamine amidotransferase class-I FT GO:Molecular Function:catalytic activity (GO:0003824)" FT /inference="protein motif:HMMPIR:PIRSF001375 GMP FT synthase/anthranilate synthase component II" FT /inference="protein motif:HMMTigr:TIGR00888 guaA_Nterm:GMP FT synthase, N-terminal domai InterPro:IPR004739 GMP synthase, FT N-terminal GO:Molecular Function:GMP synthase FT (glutamine-hydrolyzing) activity (GO:0003922), Molecular FT Function:ATP binding (GO:0005524), Biological Process:GMP FT biosynthesis (GO:0006177)" FT /inference="protein motif:ScanRegExp:PS00442 GATASE_TYPE_I FT InterPro:IPR012998 Glutamine amidotransferase, class I, FT active site" FT /inference="protein motif:superfamily:SSF52317 Class I FT glutamine amidotransferase-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33265.1" FT /translation="MIVIMDNGGQYVHRIWRTLRYLGVEAKIIPNTTPLEEIKAMEPKG FT IIFSGGPDINKTGNCDAILEHYDEFNVPILGICLGHQLIARHFGGKVGRGKKAEYSLVE FT IEIVEENDLFKGFPRKLKVWESHMDEVKELPPGFKLLARSETCPIEAMKHETLPIYGVQ FT FHPEVSHTERGAEVYRNFARLCGEL" FT gene 723687..723962 FT /locus_tag="TGAM_0764" FT /note="tg0764" FT CDS 723687..723962 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0764" FT /product="Putative TonB-dependent receptor" FT /db_xref="GOA:C5A4V4" FT /db_xref="UniProtKB/TrEMBL:C5A4V4" FT /inference="protein motif:ScanRegExp:PS00430 FT TONB_DEPENDENT_REC_1 InterPro:IPR010916 TonB box, FT N-terminal" FT /protein_id="ACS33266.1" FT /translation="MGHTIYYKTSIHRWEEFLSFIGRVCQGLGYEVAPVGESVSVFPTC FT SLVEPLLIPRSGEGFVKTNLIEPCHSIYLLILHSVSSFGSVSVWED" FT gene complement(723917..724672) FT /locus_tag="TGAM_0765" FT /note="tg0765" FT CDS complement(723917..724672) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0765" FT /product="Conserved hypothetical protein" FT /note="4 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR018663" FT /db_xref="UniProtKB/TrEMBL:C5A4V5" FT /inference="protein motif:CDD:COG4025, Predicted membrane FT protein [Function unknown]" FT /inference="protein motif:COG:COG4025 Predicted membrane FT protein; S Function unknown" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33267.1" FT /translation="MSLLDLFYSIGEAVEEFSRKAVHSIRELVSPTPQSKPPEFRILRR FT LVRREVTVHELLSLKLQLVLVGYLLLSLLIVLTLRSPYLLALLFIGEIAYLRYLIKRNW FT NFFVEAEPYYFFYSVISVISFLSFLGYLLLRKLATSVYYYYGYLIGVLIVVLLFRWYFK FT GRYGREYTYGIVEEVRGDLIRVFVNDDLAANVKPGRYWVPAVPDAEPGRVVKLLVEERT FT LKGSVPVRVIEVYLDQSSHTETEPKDDTE" FT gene complement(724682..727072) FT /locus_tag="TGAM_0766" FT /note="tg0766" FT CDS complement(724682..727072) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0766" FT /product="Putative DNA-binding protein" FT /note="Contains Myb DNA-binding domain repeat signature; 2 FT probable transmembrane helices predicted by modhmm" FT /db_xref="GOA:C5A4V6" FT /db_xref="InterPro:IPR018765" FT /db_xref="UniProtKB/TrEMBL:C5A4V6" FT /inference="protein motif:CDD:COG5306, Uncharacterized FT conserved protein [Function unknown]" FT /inference="protein motif:COG:COG5306 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:ScanRegExp:PS00334 MYB_2 FT InterPro:IPR001005 Myb, DNA-binding GO:Molecular FT Function:DNA binding (GO:0003677), Cellular FT Component:nucleus (GO:0005634)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33268.1" FT /translation="MRRGFLLNSAVIVLLIPLLLLLATYEDVSSSIIKAQSERTQFGRT FT YDVINFLNLEFQKALELSGKRAVVAAVDYVAVTGNFISPTYKANNTIRDFIKSGTSPAV FT TGYDTLRVMGGQTLKTWLSNVSKLLQDQGYSIYPSISDIVSSTEITVAPLDAFTVVIKA FT RIPRVRITDSSGLVVYDGPIPSTGGYVYSTVDIRDLEDPIFSAMTGGRYQRSLRACPYA FT YPELGSRPLTIANGTGVGTSSTVIGYFGTDFQYNLTDIWDSSGDHVSNLTVDGIPTTTR FT DVILNSGDVGILKFGNVTSSGTGTGLPSGWCSILGYRINLTIENNVGIDLNDYQIPLLI FT STAKGFTTQMLDFIFQNTQNTYLGDPYQTNASIAFYDTNCNPVPFWIEYWDPTTETALV FT WLRLSIPVNGRVTVEMYFGNETAPTKGDGNAVFEFFEDSLTIDGGNEVEIKLNQNSLDL FT YGGFAVRFRMRAERNYYDWDSGVGVEDSSGRMLLFTDDGTWSDDGLAIHRPWWVYLSEI FT GGRDPIDTFHVYEALMKPYSTTSKDSKFKDITEGRVNNDNYYRTWTEPLAYVYAVTDSE FT FWYRKTDYQWIAVRKYDTSTDLLEDPHFNGITLYWQTTTLSQIIESKPAPSTSAPSSSN FT ATVYDIQPLLNCILDQRYIATENGWSFFERLEGSDANHAAYVTLSHQMQDEMGYKYGNQ FT YYPIGLVSFMIPDPTYDRKLFNLFLTLGISVEEGQSSTDYYFLNYYFGDGTKVQGYRVW FT GVSEGTIGTSNLEEIPFFLDPQTSEEILGPQGTCDLLYGYTCP" FT gene complement(727072..729180) FT /locus_tag="TGAM_0767" FT /note="tg0767" FT CDS complement(727072..729180) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0767" FT /product="Hydrolase, putative" FT /note="Contains alpha/beta-Hydrolases (SSF53474) domain; 1 FT probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A4V7" FT /db_xref="UniProtKB/TrEMBL:C5A4V7" FT /inference="protein motif:superfamily:SSF53474 FT alpha/beta-Hydrolases" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33269.1" FT /translation="MRRGFVFTLDALLSLILVTLFITGIVAVTENSSKVYSTYMRSQSK FT ELASSTLLTLRTVPLNELVDPGVIQGWIQNGTLNLSLVNPDMSPLDIVSTYWATAPIYP FT SANLRHKAEVILGYILNKTLQRYNYELLINNYTSPYLRKLGSNYSRAPDVSPATLIMSG FT YAYNQTPRGYMARAYLTKLGSKENTYIIRGGYIYAKTYSSDDEVIIKYTVPAGAIPPDA FT TIEEIDWFLEPAWVGSEYEVYLNGNKIWSGYVDNNRLLTDTDPSGGLRLIENFKPGERN FT TFEVRVYKSWYDGGEDGAQYIRIKYQTSKPSTLRFPQKFHFEDVSARYGITAWKYLFVP FT GLLKSLSVQISVGNISSGTPITLSFMFDREIKIPATRCTYDQASKTKTCYWTNSTISTT FT LAHEGYNYNQISSRYTTIIVQAGESDTEYSPRIHLIGDNSFVEADYRSEVLLTAYTIDI FT TEPIPMPRSDWTSYLTIQFRVPSGATPLWAKFQFPWLYYTGYDPYQKIQIDNDEISPTY FT IHCHGGGCNPSSPFIYALARVGYTKDTFDWRYRPLPNAISKGFNKLTISLGYGYWLQPK FT NGNGELTYVIQAYAGYGDVFPKYIRDGCNGYNITYYWVGDNSPHHILAGEEPYCDLTAQ FT DLLDGRNTYAVDDAIVRLFNNLGGDGTQSNPILVELPSTVQIEVASMGNIPGLFKPIQI FT TLRVWREG" FT gene complement(729183..730178) FT /locus_tag="TGAM_0768" FT /note="tg0768" FT CDS complement(729183..730178) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0768" FT /product="Conserved hypothetical protein" FT /note="Large 143 aa insertion at pos. 127 in other FT thermococcus orthologues; 2 probable transmembrane helices FT predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4V8" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33270.1" FT /translation="MRRAQLLSLDAMLSLIIMMFVFAAVINTSTTLKGEITSMIGWYER FT SNIADNMLDVLTKSPGDPVDWELNPSAFRVIGLRSVNNTFAISYRKIVVMNENLPSVLG FT SLVNMSLGRNIMMSTYISKFELAGTFPTINGNYTLASTFVELNQPTYSFAIVNRTIVTD FT YTTISSSLNESSWIDVSQKKFVVERFEYNLSAGPSTEEPIVYGVLAQKPPINSHMEITA FT PDVAGNLTLVVLAGSGLKAILIYRNETGNPLSATLVENGTVINYSGNTSSISIPLTNVI FT GDNVNSVVGIWLYSLNGWARNEIEITIIPSLKWLLKPKFDEGIIKLVVWD" FT gene complement(730175..730645) FT /locus_tag="TGAM_0769" FT /note="tg0769" FT CDS complement(730175..730645) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0769" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4V9" FT /protein_id="ACS33271.1" FT /translation="MSSSRAKAQTALEVLFIAGIILIGAAILLPGYMNTNTDTVVLMHV FT KNAADNACSYLGTGVEVNEPAYSSLNAVIKEANYSSIQCKVSRTFIDSSTESSINLNVT FT VIYSGPLEVSKVENAISGFIENWLESKGFSRVNGALSYGGKTVSITVKVVRA" FT gene complement(730626..731075) FT /locus_tag="TGAM_0770" FT /note="tg0770" FT CDS complement(730626..731075) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0770" FT /product="Conserved hypothetical protein" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4W0" FT /protein_id="ACS33272.1" FT /translation="MGEMKRKAQITFDFLIAIMLVTVTVAGIVSIASGETANARTFDSA FT AKLKILAVDLRDTVTQVYAAGDGFTVRKELPFELKAGDSVTITLNSTTNRVEIAATLGG FT KTFKVAQRLQVPLYATSSITLGQGERDFNVTAQNVGGEIHVLLQG" FT gene complement(731068..731709) FT /locus_tag="TGAM_0771" FT /note="tg0771" FT CDS complement(731068..731709) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0771" FT /product="Conserved hypothetical protein" FT /note="Belongs to DUF361 family; 1 probable transmembrane FT helix predicted by modhmm" FT /db_xref="InterPro:IPR007166" FT /db_xref="UniProtKB/TrEMBL:C5A4W1" FT /inference="protein motif:COG:COG1991 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF04021 DUF361 FT InterPro:IPR007166 Protein of unknown function DUF361" FT /protein_id="ACS33273.1" FT /translation="MGKKGQISLEFLFIFAILLILLAYSVKNTTFQQGSQSIETLRVQI FT ALEEKELANTISGAISQAYSQGPGSKTTVYVKLVYLRKPYYLEKVWGVADPMIFVTYGQ FT HLNDGNGTYVMVLNGTGTTKVILTGGNKNAFWTRALYQRDLLGNSTVWGGSSASVDFGT FT GVTTVYGLRLDPSTIPQVLKVVVEWNPDLPNSWVFNSTAGELMININPGG" FT gene complement(731774..732400) FT /locus_tag="TGAM_0772" FT /note="tg0772" FT CDS complement(731774..732400) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0772" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4W2" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33274.1" FT /translation="MPSEGIRDSVEVALELDEREVYSHIAHESAEDIRRIISSIDAERA FT QKKGFLVYYHDDWDSLIRERIRKGKRHTAFDFYNPALLDIWEAKVEELKDVRKAKYFLL FT SLIGIGVIFSITAGLLFSWYFVLPGLGLLPLVLWVLDRAREKSDLIYHQLTQFFIDEMR FT ALLSRYNLNPERYRFKLFNDDYFGVRRIKIGRESFAIAEPLNDVE" FT gene complement(732390..733487) FT /gene="ftsZ-2" FT /locus_tag="TGAM_0773" FT /note="tg0773" FT CDS complement(732390..733487) FT /codon_start=1 FT /transl_table=11 FT /gene="ftsZ-2" FT /locus_tag="TGAM_0773" FT /product="Cell division GTPase, ftsZ-like protein (ftsZ)" FT /db_xref="GOA:C5A4W3" FT /db_xref="InterPro:IPR000158" FT /db_xref="InterPro:IPR003008" FT /db_xref="InterPro:IPR017975" FT /db_xref="UniProtKB/TrEMBL:C5A4W3" FT /inference="protein motif:CDD:COG5023, Tubulin FT [Cytoskeleton]" FT /inference="protein motif:CDD:FtsZ, Cell division GTPase FT [Cell division and chromosome partitioning]" FT /inference="protein motif:CDD:FtsZ, FtsZ is a GTPase that FT is similar to the eukaryotic tubulins and is essential for FT cell division in prokaryotes" FT /inference="protein motif:CDD:FtsZ_type1, FtsZ is a GTPase FT that is similar to the eukaryotic tubulins and is essential FT for cell division in prokaryotes" FT /inference="protein motif:CDD:FtsZ_type2, FtsZ is a GTPase FT that is similar to the eukaryotic tubulins and is essential FT for cell division in prokaryotes" FT /inference="protein motif:CDD:Tubulin, Tubulin/FtsZ family, FT GTPase domain" FT /inference="protein motif:CDD:Tubulin_FtsZ, FT Tubulin/FtsZ:Family includes tubulin alpha-, beta-, gamma-, FT delta-, and epsilon-tubulins as well as FtsZ, all of which FT are involved in polymer formation" FT /inference="protein motif:COG:COG0206 Cell division GTPase; FT D Cell cycle control, cell division, chromosome FT partitioning" FT /inference="protein motif:FPrintScan:PR00423 CELLDVISFTSZ FT InterPro:IPR000158 Cell division protein FtsZ GO:Molecular FT Function:GTP binding (GO:0005525), Cellular FT Component:cytoplasm (GO:0005737)" FT /inference="protein motif:Gene3D:G3D.3.40.50.1440 no FT description" FT /inference="protein motif:HMMPanther:PTHR11588 TUBULIN FT InterPro:IPR000217 Tubulin GO:Molecular Function:structural FT molecule activity (GO:0005198), Cellular FT Component:microtubule (GO:0005874), Biological FT Process:microtubule-based movement (GO:0007018)" FT /inference="protein motif:HMMPfam:PF00091 Tubulin FT InterPro:IPR003008 Tubulin/FtsZ, GTPase" FT /inference="protein motif:ScanRegExp:PS00227 TUBULIN FT InterPro:IPR000217 Tubulin GO:Molecular Function:structural FT molecule activity (GO:0005198), Cellular FT Component:microtubule (GO:0005874), Biological FT Process:microtubule-based movement (GO:0007018)" FT /inference="protein motif:superfamily:SSF52490 FT Tubulin/Dihydroxyacetone kinase nucleotide-binding domain" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33275.1" FT /translation="MRAIIIGVGQCGTKIADLFSLVDFEALAINTSRGDLDYLKHIPSD FT RRILIGESLTGGKGVNANPVLGREAMKRDLPMVMRKISSMVGYEDVDIFFLTFGFGGGT FT GAGGTPVLAEALKEEYPDSLVVAIGALPLKEEGIRPTINAAITIDKLSKVADSIIAIDN FT NKLKEGDLDISQAYEMINYTIVERIASLLALIDVPGEQTLDASDLKFVLKAFGSFATVG FT YAKARADQLKSLSKLIVRSFESEGLYLEANVESALYGLVAVHGPPEVLKAKEIFEALDE FT LTDRIKGKQIFRGFYPDPRTREVEVVTLLSGIYESESIERIIRTAKEYASSFMRAKKEA FT EEKKRELLSGLPDFDDLYPGGENAE" FT gene complement(733497..735758) FT /locus_tag="TGAM_0774" FT /note="tg0774" FT CDS complement(733497..735758) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0774" FT /product="Terpenoid cyclase/protein prenyltransferase FT putative" FT /note="1 probable transmembrane helix predicted by modhmm" FT /db_xref="GOA:C5A4W4" FT /db_xref="InterPro:IPR008930" FT /db_xref="UniProtKB/TrEMBL:C5A4W4" FT /inference="protein motif:CDD:ISOPREN_C2_like, This group FT contains class II terpene cyclases, protein FT prenyltransferases beta subunit, two broadly specific FT proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) FT and pregnancy zone protein (PZP) and, the C3 C4 and C5 FT components of vertebrate complement" FT /inference="protein motif:Gene3D:G3D.1.50.10.20 no FT description" FT /inference="protein motif:HMMPanther:PTHR11764 SQUALENE FT CYCLASES-RELATED InterPro:IPR002365 Terpene synthase FT GO:Biological Process:metabolism (GO:0008152), Molecular FT Function:lyase activity (GO:0016829)" FT /inference="protein motif:ScanRegExp:PS00018 EF_HAND_1 FT InterPro:IPR002048 Calcium-binding EF-hand GO:Molecular FT Function:calcium ion binding (GO:0005509)" FT /inference="protein motif:superfamily:SSF48239 FT InterPro:IPR008930 Terpenoid cylases/protein FT prenyltransferase alpha-alpha toroid" FT /inference="protein motif:superfamily:SSF48239 Terpenoid FT cylases/Protein prenyltransferases InterPro:IPR008930 FT Terpenoid cylases/protein prenyltransferase alpha-alpha FT toroid" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33276.1" FT /translation="MKRWPLKIIPLILIGVIVFAPLTAALSITEGSANFLKKFGDSSGQ FT IRTLSLTIIALAEASGRVNEDLTPKVREFTRELISYQNPDGGWGYFPGSVSNVLDTSYA FT LIALSKAEKFFEGTDDLFKVDDARKKGVKFLVSSKTGNTWGYIPNSTPMFYPTVLALWA FT LGENGHNSSSPVVSSAVSSLPELPRYIDDYTALGLRLIAFKAVGEPVDKSEVKELIEIL FT NGDDLSPAQRALLTYALTLYSEPTFEVVATIARLDQIKHTGANMVFWADTPKYPISVTD FT TVTPTAYALLAVSELVPPIREVTINPNEMPCDQLISYQNPDGGWGIYRGSPSNEKATYY FT ALIAIEACYPAPDIVEKALNWTEERLKEDERVVLNEGRLTVGYYYALMTLLHFNRLNES FT EREHAIEVIKSVKMDTGKWGVENLGPQPAETAMALSALMALGINRSDPDVIAAKKWLLS FT ISSTGWGLYYQSGLYPFMLEVNVLDTLTVLKALEPIATRPELEAHLKWLISQRVDGGWP FT YMKEHTNINGTKIEGRPRVDLTVEATLLLMHYGFDYTQQTLDFVKKARDSGLIANDTLE FT TAFAVIYLSSFNKMPMVDLSDVRNALETSTFNVVCPEDRISDAKDVINYLRETFGYRFD FT LGPLSLMEEGNSIVLAGFDDVNVSRYNRYIVLDISGNEIGLKNSTYPRQDTVLLIPGRT FT AKGVMLFVLYDEDSSEIAKLVFKIGYVKYMQGPAVVVHYEDRNGDGKIELNEVTAETVG FT " FT gene complement(735836..736846) FT /locus_tag="TGAM_0775" FT /note="tg0775" FT CDS complement(735836..736846) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0775" FT /product="Radical SAM protein" FT /db_xref="GOA:C5A4W5" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013917" FT /db_xref="InterPro:IPR023993" FT /db_xref="UniProtKB/TrEMBL:C5A4W5" FT /inference="protein motif:CDD:COG0731, Fe-S oxidoreductases FT [Energy production and conversion]" FT /inference="protein motif:COG:COG0731 Fe-S oxidoreductases; FT C Energy production and conversion" FT /inference="protein motif:HMMPanther:PTHR13930 FT UNCHARACTERIZED" FT /inference="protein motif:HMMPanther:PTHR13930:SF14 FT UNCHARACTERIZED" FT /inference="protein motif:HMMPfam:PF04055 Radical_SAM FT InterPro:IPR007197 Radical SAM GO:Molecular FT Function:catalytic activity (GO:0003824), Molecular FT Function:iron ion binding (GO:0005506)" FT /inference="protein motif:superfamily:SSF56784 HAD-like" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33277.1" FT /translation="MRLMAIVVKANPNMPEEIALLFRKQHYELVGRHSGVKLCHWLKES FT LTKGRFCYKQKFYGIASHRCLQMTPVLAWCTHNCIFCWRPMESFLGTELPEPWDDPAFI FT VEESIKAQRKLLVGYKGNPKVPKEKFEEAWNPKHAAISLSGEPMLYPYMGDLVEEFHKR FT GFTTFIVTNGTVPERLEEMIKEDKLPTQLYVSLTAPDIETYNRVNVPMIPDGWERIMET FT LRLMRDAETRTVIRLTLVKGENMHSPEKYAELIKIANPMFVEAKAYMFVGFSRNRLTIN FT NMPRHEEIRAFAEELVKHLPGYHIEDEYEPSRVVLIMRDDVNPKGRGLEGRFIKD" FT gene 736895..737191 FT /locus_tag="TGAM_0776" FT /note="tg0776" FT CDS 736895..737191 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0776" FT /product="Hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4W6" FT /protein_id="ACS33278.1" FT /translation="MVSVVQGVTYDIVREPIGLPLKPLIRFSSMSKVFRFKKEGFPHGG FT EIFAVREVPFSCGRFLRPFQESFGNALVVTRHGYAFSQPDRIKWYFLTLYLWN" FT gene complement(737232..737603) FT /locus_tag="TGAM_0777" FT /note="tg0777" FT CDS complement(737232..737603) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0777" FT /product="Hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4W7" FT /protein_id="ACS33279.1" FT /translation="MGIGRVFYLALAYALFAWLSPCLLLVIVPITLLEFVPGSEKVVMR FT EGEYVKMFSRDRRAVFAREFLLGTWLLVIGVGATIYRAYLGQEDPEEAIFLAALTFALA FT VDEYRRFQKRRRGVLQQPL" FT gene complement(737545..737946) FT /locus_tag="TGAM_0778" FT /note="tg0778" FT CDS complement(737545..737946) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0778" FT /product="Hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4W8" FT /protein_id="ACS33280.1" FT /translation="MRVTFERVVVVEGSPENLEKFLGENTFVYWVKGPNGEIWSLAPDF FT IRERYEGHFYLVDFEEESFLLASTVTLKLPVLGNRVARFEGKRKAVARRVKLHLIDPFR FT RILMLQKKWKRGHRQGLLSGLSIRPLCMA" FT gene 738043..738666 FT /locus_tag="TGAM_0779" FT /note="tg0779" FT CDS 738043..738666 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0779" FT /product="Phosphatidate cytidylyltransferase, putative" FT /note="May be related to the dochichol kinases; 6 probable FT transmembrane helices predicted by modhmm" FT /db_xref="GOA:C5A4W9" FT /db_xref="InterPro:IPR000374" FT /db_xref="UniProtKB/TrEMBL:C5A4W9" FT /inference="protein motif:CDD:SEC59, Dolichol kinase [Lipid FT metabolism]" FT /inference="protein motif:HMMPfam:PF01148 CTP_transf_1 FT InterPro:IPR000374 Phosphatidate cytidylyltransferase FT GO:Molecular Function:phosphatidate cytidylyltransferase FT activity (GO:0004605), Biological Process:phospholipid FT biosynthesis (GO:0008654), Cellular Component:membrane FT (GO:0016020)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33281.1" FT /translation="MSKRELIRKLWHVSPGILGAPIILFTPRWVTLLVVWSLAFLYTLQ FT HLKLRRGWKFTVPIAELSYRTMAREDERDNFLGSFLFWVTMGIICTVFPKLMALSALWV FT STFGDCFNAITGQALGGPRIPWNRKKTLIGSATMFIVSVLVLWTAHSVLSLDPSWSLIT FT GVALVATALESLPLRSAYDEFTVPFATAFLLWLAYGGSLLSPVW" FT gene complement(738667..739473) FT /locus_tag="TGAM_0780" FT /note="tg0780" FT CDS complement(738667..739473) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0780" FT /product="Radical SAM domain protein" FT /db_xref="UniProtKB/TrEMBL:C5A4X0" FT /inference="protein motif:BlastProDom:PD011382 FT Q8U2J1_PYRFU_Q8U2J1; InterPro:IPR002787 Protein of unknown FT function DUF85" FT /inference="protein motif:CDD:SplB, DNA repair photolyase FT [DNA replication, recombination, and repair]" FT /inference="protein motif:COG:COG1533 DNA repair FT photolyase; L Replication, recombination and repair" FT /inference="protein motif:HMMPfam:PF04055 Radical_SAM FT InterPro:IPR007197 Radical SAM GO:Molecular FT Function:catalytic activity (GO:0003824), Molecular FT Function:iron ion binding (GO:0005506)" FT /protein_id="ACS33282.1" FT /translation="MLMKVEVIKRRAKSLYTRSRIPGVSWSANQYVGCSFACPYCYAKN FT VVREFGEREWGSWVIAKINAPELARKHVSGKIVMSTVSDPYQPVEAKLKLTRATLRFMD FT KRNELSILTKSPLVTRDIALFKLFRSIEVGLTLNSFDGREKSLLEPLTPVMKARVNALQ FT KLHEEGIRTYTFVSPIIPGVTDVSRIVKETRGFVDYYFFEVLNLKKAGNEFQETLRSEF FT PESYCILTSEELFGAFISELRDEVRSLGIKTEGIETHFRGWGFVRI" FT gene 739436..740152 FT /locus_tag="TGAM_0781" FT /note="tg0781" FT CDS 739436..740152 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0781" FT /product="Zinc-dependent protease, putative" FT /db_xref="GOA:C5A4X1" FT /db_xref="InterPro:IPR002725" FT /db_xref="UniProtKB/TrEMBL:C5A4X1" FT /inference="protein motif:CDD:COG1451, Predicted FT metal-dependent hydrolase [General function prediction FT only]" FT /inference="protein motif:CDD:DUF45, Protein of unknown FT function DUF45" FT /inference="protein motif:COG:COG1451 Predicted FT metal-dependent hydrolase; R General function prediction FT only" FT /inference="protein motif:HMMPfam:PF01863 DUF45 FT InterPro:IPR002725 Protein of unknown function DUF45" FT /protein_id="ACS33283.1" FT /translation="MALRFMTSTFISTGRDYTLKGGRMEVEVRHRPVRYARLEIKPDGR FT IVVTAPEGFDVEAFIKKHERWLRNRLRELEEVRRESARGFPFFGEFYRLELGNVRKVEL FT RDGKLILPAERERARKALKELLRDKVAALVTLYSVLMGVSPGKIYIRNQRTKWASCSSR FT GNLSFNLRLAALPEKLIEYVVIHELAHLRYLDHSRAFWRFVGRFYPDYGTARRELRRWW FT GVIEVNEGWRWLEGRE" FT gene 740131..740541 FT /gene="nefD-2" FT /locus_tag="TGAM_0782" FT /note="tg0782" FT CDS 740131..740541 FT /codon_start=1 FT /transl_table=11 FT /gene="nefD-2" FT /locus_tag="TGAM_0782" FT /product="Nodulation efficiency protein D related protein FT (nefD)" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="InterPro:IPR002810" FT /db_xref="InterPro:IPR012340" FT /db_xref="UniProtKB/TrEMBL:C5A4X2" FT /inference="protein motif:CDD:NfeD, Membrane-bound serine FT protease (ClpP class) [Posttranslational modification, FT protein turnover, chaperones]" FT /inference="protein motif:CDD:NfeD, Nodulation efficiency FT protein D (NfeD)" FT /inference="protein motif:COG:COG1585 Membrane protein FT implicated in regulation of membrane protease activity; O FT Posttranslational modification, protein turnover, FT chaperones" FT /inference="protein motif:HMMPfam:PF01957 NfeD FT InterPro:IPR002810 Nodulation efficiency, NfeD" FT /protein_id="ACS33284.1" FT /translation="MAGGKGVSLLKLIALIADEIIVGVFLLVVLPALGMGVPVLVTGLV FT LGVLLVKDVLIAPYVLGGGLEKRPKAGPESLVGRTAVVVDDLSPEGLVKLDGELWRARC FT FHGTARRGEKVRVVEVDGTKLLVELPASEEPR" FT gene complement(740498..740932) FT /locus_tag="TGAM_0783" FT /note="tg0783" FT CDS complement(740498..740932) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0783" FT /product="Conserved hypothetical protein" FT /note="2 probable transmembrane helices predicted by FT modhmm" FT /db_xref="UniProtKB/TrEMBL:C5A4X3" FT /protein_id="ACS33285.1" FT /translation="MLYEETLYSKWITLLLLPPLVLMPIGLYESLKTGEAVPIMAVSTV FT LTVTILIEVMAFRVRVYEDRIFLSGFLGLFLRKTVRVDEIEWFAVREGWMSCPAKIHFT FT LPAKACVYIKRKKGWDVSFSTNRPEEIIEVLRSLGVQRGA" FT gene 740996..741424 FT /locus_tag="TGAM_0784" FT /note="tg0784" FT CDS 740996..741424 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0784" FT /product="CoA-binding protein" FT /db_xref="GOA:C5A4X4" FT /db_xref="InterPro:IPR003781" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/TrEMBL:C5A4X4" FT /inference="protein motif:CDD:CoA_binding, CoA binding FT domain" FT /inference="protein motif:CDD:COG1042, Acyl-CoA synthetase FT (NDP forming) [Energy production and conversion]" FT /inference="protein motif:CDD:COG1832, Predicted FT CoA-binding protein [General function prediction only]" FT /inference="protein motif:COG:COG1832 Predicted CoA-binding FT protein; R General function prediction only" FT /inference="protein motif:HMMPfam:PF02629 CoA_binding FT InterPro:IPR003781 CoA-binding" FT /inference="protein motif:superfamily:SSF51735 FT NAD(P)-binding Rossmann-fold domains" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33286.1" FT /translation="MVNAIAVDGLTDDEVREILTRYRKIALVGASPKPERDANEVMRYL FT IEKGYEVYPVNPRYSEVLGRKCYPSVLDIPEEVEIVDLFVRPEFARDYVEQAIKKGAKV FT VWFQFGTFDEEAFRRAREAGLTAVAHRCIKQEHERLIG" FT gene complement(741414..741644) FT /locus_tag="TGAM_0785" FT /note="tg0785" FT CDS complement(741414..741644) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0785" FT /product="Conserved hypothetical protein, C-term fragment" FT /note="Possibly a pseudo-gene, start codon in N-terminus is FT missing" FT /db_xref="InterPro:IPR019298" FT /db_xref="UniProtKB/TrEMBL:C5A4X5" FT /protein_id="ACS33287.1" FT /translation="MLEILREHVIFVPEEFYSEFIPLALEICPDKDDADFVALSLKVNA FT PLWSNDRRLKEIREIKVLNTGEVLKLLGITR" FT gene complement(741810..742040) FT /locus_tag="TGAM_0786" FT /note="tg0786" FT CDS complement(741810..742040) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0786" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4X6" FT /protein_id="ACS33288.1" FT /translation="MLVVVLGGIVVKVPQGVDDRIALLIARTISERLKTLVEINEALKD FT SRLSEEDAVELGRLAKKGRGKYLERRYSSRR" FT gene complement(742067..743167) FT /locus_tag="TGAM_0787" FT /note="tg0787" FT CDS complement(742067..743167) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0787" FT /product="RNA methylase, putative" FT /note="Belongs to UPF0020 family" FT /db_xref="GOA:C5A4X7" FT /db_xref="InterPro:IPR000241" FT /db_xref="UniProtKB/TrEMBL:C5A4X7" FT /inference="protein motif:CDD:COG1041, Predicted DNA FT modification methylase [DNA replication, recombination, and FT repair]" FT /inference="protein motif:CDD:UPF0020, Putative RNA FT methylase family UPF0020" FT /inference="protein motif:COG:COG1041 Predicted DNA FT modification methylase; L Replication, recombination and FT repair" FT /inference="protein motif:Gene3D:G3D.3.40.50.150 no FT description" FT /inference="protein motif:HMMPfam:PF01170 UPF0020 FT InterPro:IPR000241 Putative RNA methylase GO:Molecular FT Function:molecular function unknown (GO:0005554)" FT /inference="protein motif:superfamily:SSF53335 FT S-adenosyl-L-methionine-dependent methyltransferases" FT /protein_id="ACS33289.1" FT /translation="MYGVILGKNPELSRAEFYSFGRRFGLKVKLLEEHSNWLLIEARPS FT IERHFRWLGGSLKLVRIVGEGEEAIKDLEYAKLFTVSLYGRDDWRLWRKLGSAVKREFK FT QEGPAKFFKPAKVYSMPAELILKGFPEVKDVVFLFRDDGSFLVGETVKVTDPFELKKLD FT VERPVQRPILSIPPRLARIMVNLTEVRRGLFLDPFCGIGTVLQEFVLQGLPAYGSDRDP FT ERVREARKNIEWLRREFRLKNSARIEVCDARKLKRCFRERFDAIVTEPYLGKPLKRNPG FT RGEAIKLANELDRLYFSVFESFSEVLKRNGRVVFVFPAYRLRDGSIYRKERRWLGKLGF FT EVLGRYPDYEERHRLVRDIHVIRKRG" FT gene 743257..744543 FT /locus_tag="TGAM_0788" FT /note="tg0788" FT CDS 743257..744543 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0788" FT /product="Protein prenyltransferase, putative" FT /note="Contains Protein prenylyltransferase ( SSF48439 ) FT domain" FT /db_xref="GOA:C5A4X8" FT /db_xref="UniProtKB/TrEMBL:C5A4X8" FT /inference="protein motif:superfamily:SSF48439 Protein FT prenylyltransferase InterPro:IPR008940 Protein FT prenyltransferase" FT /protein_id="ACS33290.1" FT /translation="MLIREIIETAEVIRDPYLRATTYAKIGERLARVRDAKFKLVFLKA FT IETTREIDDPVKTFRALLSIGYSMKKAGLRSAKKIYQRVLEDSRELPDPVRDDLMVLAA FT RYMLGLGEINEAIIYAMEVKNPSLRDTVLLQIIRRNTSLIGTEKVRVAYRIRKSKMALE FT NISTEPHRSKALIEIMKSYFLLSSYENGIATIREIEQREWAKYAFKEALFFLKERGVIE FT KYVPNLKELAKYLVGKFGDDFKIELGVAFALAEEPVEAADLLRKLDGDKALVEVAIRLL FT EVAPRYLPSFIRVLNEREATEVGRALMNRFLENPDEGEWETIRAIWERSRSEEIRVKIA FT RYSLVKGDIDGAMKVVEHIENERLRSIVLADIAHRLLKMGDVSRAIDVALEVRDPKFSS FT ILIAEILIGALDREIEAKVIVNGKAKNHS" FT gene 744518..744808 FT /locus_tag="TGAM_0789" FT /note="tg0789" FT CDS 744518..744808 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0789" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4X9" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33291.1" FT /translation="MERLRITLRRKKSDPVDYARDLAEALLEGRVIGEDVLFRDAVNEI FT YTTLKEALFKGKEGNENLIQAYELAVVLRYLVQDGVKTSREILEELVQILE" FT gene 744847..745272 FT /locus_tag="TGAM_0790" FT /note="tg0790" FT CDS 744847..745272 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0790" FT /product="Conserved hypothetical protein" FT /note="Belongs to UPF0047 family" FT /db_xref="InterPro:IPR001602" FT /db_xref="UniProtKB/TrEMBL:C5A4Y0" FT /inference="protein motif:BlastProDom:PD005232 FT Q8TX62_METKA_Q8TX62; InterPro:IPR001602 Protein of unknown FT function UPF0047 GO:Molecular Function:molecular function FT unknown (GO:0005554)" FT /inference="protein motif:CDD:UPF0047, Uncharacterised FT protein family UPF0047" FT /inference="protein motif:COG:COG0432 Uncharacterized FT conserved protein; S Function unknown" FT /inference="protein motif:HMMPfam:PF01894 UPF0047 FT InterPro:IPR001602 Protein of unknown function UPF0047 FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /inference="protein motif:HMMPIR:PIRSF004681 FT Uncharacterised conserved protein InterPro:IPR001602 FT Protein of unknown function UPF0047 GO:Molecular FT Function:molecular function unknown (GO:0005554)" FT /inference="protein motif:HMMTigr:TIGR00149 FT TIGR00149:conserved hypothetical protein T FT InterPro:IPR001602 Protein of unknown function UPF0047 FT GO:Molecular Function:molecular function unknown FT (GO:0005554)" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33292.1" FT /translation="MLLSFEVSTTERFQIIDVTDEVQRLVWKGKLRHGIAVVFTKHTTT FT GLMINEPEKGLLEDIKAKMKELIPRGAGYKHDRIDSNAHSHLRASLFLNTELVVPVDEG FT ELVLGTWQRILFVELDGPRHRKIMVMLCPCPEYPEEE" FT gene 745274..746113 FT /locus_tag="TGAM_0791" FT /note="tg0791" FT CDS 745274..746113 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0791" FT /product="D-aminopeptidase" FT /note="Belongs to M55 MEROPS petidase family" FT /db_xref="GOA:C5A4Y1" FT /db_xref="InterPro:IPR007035" FT /db_xref="UniProtKB/TrEMBL:C5A4Y1" FT /inference="protein motif:CDD:DppA, D-aminopeptidase [Amino FT acid transport and metabolism]" FT /inference="protein motif:CDD:Peptidase_M55, FT D-aminopeptidase" FT /inference="protein motif:COG:COG2362 D-aminopeptidase; E FT Amino acid transport and metabolism" FT /inference="protein motif:HMMPfam:PF04951 Peptidase_M55 FT InterPro:IPR007035 Peptidase M55, D-aminopeptidase" FT /inference="protein motif:HMMPIR:PIRSF015853 FT D-aminopeptidase, DppA type InterPro:IPR007035 Peptidase FT M55, D-aminopeptidase" FT /inference="protein motif:superfamily:SSF63992 Dipeptide FT transport protein InterPro:IPR007035 Peptidase M55, FT D-aminopeptidase" FT /experiment="gene product confirmed by mass spectrometry" FT /protein_id="ACS33293.1" FT /translation="MRAFISVDLEGLPHVVSREHLFVKGALYSEARRIATEVVKTAAEA FT LYQNGFDEVVVADSHGPMVNVIPEEMPDYVELVRGFPRPLSMVAFAKGSDAAIFLGYHA FT KAGTGYATFDHTYSGSTIDRLEINGIEVSEFLLNAYLLGSWGVPVILVGGDARLIEDVK FT KFAPWAVGIAFKESLSRYAAKSPSLGKVKALLKAGVTEAVIKLEEGEAKPLKAKEPVEV FT KLRFLSSAFADAAELLPIIERIDGKTVRFEAETVEDAYRIVELLILAGAGVNAIATR" FT gene 746129..746518 FT /locus_tag="TGAM_0792" FT /note="tg0792" FT CDS 746129..746518 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0792" FT /product="Conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:C5A4Y2" FT /protein_id="ACS33294.1" FT /translation="MRRIDQFEPMRIVKVPRDDRVGVIPYGSVPEVELIIEVVPKRGEL FT LIRTTNPNTVKVEITNEVELYKYDGFWARLDPGIVFIERRIVLLPGETYEQRLPVDLSP FT GRYKVVKFAYVDGARVRVEKEFTVM" FT gene complement(746505..747176) FT /locus_tag="TGAM_0793" FT /note="tg0793" FT CDS complement(746505..747176) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="TGAM_0793" FT /product="ABC transporter, ATP-binding protein" FT /db_xref="GOA:C5A4Y3" FT /db_xref="InterPro:IPR003439" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR017871" FT /db_xref="UniProtKB/TrEMBL:C5A4Y3" FT /inference="protein motif:BlastProDom:PD000006 FT Q8U2F5_PYRFU_Q8U2F5; InterPro:IPR003439 ABC transporter FT related GO:Molecular Function:ATP binding (GO:0005524), FT Molecular Function:ATPase activity (GO:0016887)" FT /inference="protein motif:CDD:AbcC, ABC-type metal ion FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:ABCC_ATM1_transporter, ATM1 FT is an ABC transporter that is expressed in the FT mitochondria" FT /inference="protein motif:CDD:ABCC_bacteriocin_exporters, FT ABC-type bacteriocin exporters" FT /inference="protein motif:CDD:ABCC_cytochrome_bd, The CYD FT subfamily implicated in cytochrome bd biogenesis" FT /inference="protein motif:CDD:ABCC_Glucan_exporter_like, FT Glucan exporter ATP-binding protein" FT /inference="protein motif:CDD:ABCC_Hemolysin, The FT ABC-transporter hemolysin B is a central component of the FT secretion machinery that translocates the toxin, hemolysin FT A, in a Sec-independent fashion across both membranes of E" FT /inference="protein motif:CDD:ABCC_MRP_domain1, Domain 1 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_domain2, Domain 2 of FT the ABC subfamily C" FT /inference="protein motif:CDD:ABCC_MRP_Like, The MRP FT (Mutidrug Resistance Protein)-like transporters are FT involved in drug, peptide, and lipid export" FT /inference="protein motif:CDD:ABCC_MsbA, MsbA is an FT essential ABC transporter, closely related to eukaryotic FT MDR proteins" FT /inference="protein motif:CDD:ABCC_NFT1, Domain 2 of NFT1 FT (New full-length MRP-type transporter 1)" FT /inference="protein motif:CDD:ABCC_Protease_Secretion, This FT family represents the ABC component of the protease FT secretion system PrtD, a 60-kDa integral membrane protein FT sharing 37% identity with HlyB, the ABC component of the FT alpha-hemolysin secretion pathway, in the C-terminal FT domain" FT /inference="protein motif:CDD:ABCC_TAP, TAP, the FT Transporter Associated with Antigen Processing" FT /inference="protein motif:CDD:ABCF_EF-3, ABCF_EF-3 FT Elongation factor 3 (EF-3) is a cytosolic protein required FT by fungal ribosomes for in vitro protein synthesis and for FT in vivo growth" FT /inference="protein motif:CDD:ABCG_EPDR, ABCG transporters FT are involved in eye pigment (EP) precursor transport, FT regulation of lipid-trafficking mechanisms, and pleiotropic FT drug resistance (DR)" FT /inference="protein motif:CDD:ABCG_White, The White FT subfamily represents ABC transporters homologous to the FT Drosophila white gene, which acts as a dimeric importer for FT eye pigment precursors" FT /inference="protein motif:CDD:ABC_ATPase, ABC (ATP-binding FT cassette) transporter nucleotide-binding domain" FT /inference="protein motif:CDD:ABC_BcrA_bacitracin_resist, FT The BcrA subfamily represents ABC transporters involved in FT peptide antibiotic resistance" FT /inference="protein motif:CDD:ABC_Carb_Monos_I, This family FT represents the domain I of the carbohydrate uptake proteins FT that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Monos_II, This FT family represents domain II of the carbohydrate uptake FT proteins that transport only monosaccharides (Monos)" FT /inference="protein motif:CDD:ABC_Carb_Solutes_like, ABC FT Carbohydrate and Solute Transporters-like subgroup" FT /inference="protein motif:CDD:ABC_Class3, This class is FT comprised of all BPD (Binding Protein Dependent) systems FT that are largely represented in archaea and eubacteria and FT are primarily involved in scavenging solutes from the FT environment" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain1, FT Domain I of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_cobalt_CbiO_domain2, FT Domain II of the ABC component of a cobalt transport family FT found in bacteria, archaea, and eukaryota" FT /inference="protein motif:CDD:ABC_CysA_sulfate_importer, FT Part of the ABC transporter complex cysAWTP involved in FT sulfate import" FT /inference="protein motif:CDD:ABC_DrrA, DrrA is the FT ATP-binding protein component of a bacterial exporter FT complex that confers resistance to the antibiotics FT daunorubicin and doxorubicin" FT /inference="protein motif:CDD:ABC_drug_resistance_like, FT ABC-type multidrug transport system, ATPase component" FT /inference="protein motif:CDD:ABC_DR_subfamily_A, This FT family of ATP-binding proteins belongs to a multisubunit FT transporter involved in drug resistance (BcrA and DrrA), FT nodulation, lipid transport, and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_FeS_Assembly, ABC-type FT transport system involved in Fe-S cluster assembly, ATPase FT component" FT /inference="protein motif:CDD:ABC_FtsE_transporter, FtsE is FT a hydrophilic nucleotide-binding protein that binds FtsX to FT form a heterodimeric ATP-binding cassette (ABC)-type FT transporter that associates with the bacterial inner FT membrane" FT /inference="protein motif:CDD:ABC_HisP_GlnQ_permeases, HisP FT and GlnQ are the ATP-binding components of the bacterial FT periplasmic histidine and glutamine permeases, repectively" FT /inference="protein FT motif:CDD:ABC_Iron-Siderophores_B12_Hemin, ABC FT transporters, involved in the uptake of siderophores, heme, FT and vitamin B12, are widely conserved in bacteria and FT archaea" FT /inference="protein motif:CDD:ABC_KpsT_Wzt, ABC_KpsT_Wzt FT The KpsT/Wzt ABC transporter subfamily is involved in FT extracellular polysaccharide export" FT /inference="protein motif:CDD:ABC_MalK_N, The N-terminal FT ATPase domain of the maltose transporter, MalK" FT /inference="protein motif:CDD:ABC_Metallic_Cations, ABC FT component of the metal-type transporters" FT /inference="protein FT motif:CDD:ABC_MetN_methionine_transporter, MetN (also known FT as YusC) is an ABC-type transporter encoded by metN of the FT metNPQ operon in Bacillus subtilis that is involved in FT methionine transport" FT /inference="protein motif:CDD:ABC_MJ0796_Lo1CDE_FtsE, This FT family is comprised of MJ0796 ATP-binding cassette, FT macrolide-specific ABC-type efflux carrier (MacAB), and FT proteins involved in cell division (FtsE), and release of FT liporoteins from the cytoplasmic membrane (LolCDE)" FT /inference="protein motif:CDD:ABC_Mj1267_LivG_branched, The FT Mj1267/LivG ABC transporter subfamily is involved in the FT transport of the hydrophobic amino acids leucine, FT isoleucine and valine" FT /inference="protein motif:CDD:ABC_ModC_like, Archeal FT protein closely related to ModC" FT /inference="protein FT motif:CDD:ABC_ModC_molybdenum_transporter, ModC is an FT ABC-type transporter and the ATPase component of a FT molybdate transport system that also includes the FT periplasmic binding protein ModA and the membrane protein FT ModB" FT /inference="protein motif:CDD:ABC_MTABC3_MDL1_MDL2, MTABC3 FT (also known as ABCB6) is a mitochondrial ATP-binding FT cassette protein involved in iron homeostasis and one of FT four ABC transporters expressed in the mitochondrial inner FT membrane, the other three being MDL1(ABC7), MDL2, and ATM1" FT /inference="protein motif:CDD:ABC_NatA_like, Similar in FT sequence to NatA, this is the ATPase component of a FT bacterial ABC-type Na+ transport system called NatAB, which FT catalyzes ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled to proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NatA_sodium_exporter, FT NatA is the ATPase component of a bacterial ABC-type Na+ FT transport system called NatAB, which catalyzes FT ATP-dependent electrogenic Na+ extrusion without FT mechanically coupled proton or K+ uptake" FT /inference="protein motif:CDD:ABC_NikE_OppD_transporters, FT The ABC transporter subfamily specific for the transport of FT dipeptides, oligopeptides (OppD), and nickel (NikDE)" FT /inference="protein motif:CDD:ABC_NrtD_SsuB_transporters, FT NrtD and SsuB are the ATP-binding subunits of the bacterial FT ABC-type nitrate and sulfonate transport systems, FT respectively" FT /inference="protein motif:CDD:ABC_OpuCA_Osmoprotection, FT OpuCA is a the ATP binding component of a bacterial solute FT transporter that serves a protective role to cells growing FT in a hyperosmolar environment" FT /inference="protein motif:CDD:ABC_Org_Solvent_Resistant, FT ABC (ATP-binding cassette) transport system involved in FT resistant to organic solvents" FT /inference="protein motif:CDD:ABC_PDR_domain1, The FT pleiotropic drug resistance (PDR) family of ATP-binding FT cassette (ABC) transporters" FT /inference="protein motif:CDD:ABC_PDR_domain2, The FT pleiotropic drug resistance-like (PDR) family of FT ATP-binding cassette (ABC) transporters" FT /inference="protein motif:CDD:ABC_PhnC_transporter, FT ABC-type phosphate/phosphonate transport system" FT /inference="protein motif:CDD:ABC_PotA_N, PotA is an FT ABC-type transporter and the ATPase component of the FT spermidine/putrescine-preferential uptake system consisting FT of PotA, -B, -C, and -D" FT /inference="protein motif:CDD:ABC_Pro_Gly_Bertaine, This FT family comprises the glycine betaine/L-proline ATP binding FT subunit in bacteria and its equivalents in archaea" FT /inference="protein FT motif:CDD:ABC_PstB_phosphate_transporter, Phosphate uptake FT is of fundamental importance in the cell physiology of FT bacteria because phosphate is required as a nutrient" FT /inference="protein motif:CDD:ABC_putative_ATPase, This FT subfamily is involved in drug resistance, nodulation, lipid FT transport, and bacteriocin and lantibiotic immunity" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor_domain1, FT The ATPase domain 1 of RNase L inhibitor" FT /inference="protein motif:CDD:ABC_RNaseL_inhibitor_domain2, FT The ATPase domain 2 of RNase L inhibitor" FT /inference="protein motif:CDD:ABC_subfamily_A, The ABCA FT subfamily mediates the transport of a variety of lipid FT compounds" FT /inference="protein FT motif:CDD:ABC_ThiQ_thiamine_transporter, ABC-type thiamine FT tranport system" FT /inference="protein motif:CDD:ABC_TM1139_LivF_branched, FT LivF (TM1139) is part of the LIV-I bacterial ABC-type FT two-component transport system that imports neutral, FT branched-chain amino acids" FT /inference="protein motif:CDD:ABC_tran, ABC transporter" FT /inference="protein motif:CDD:ABC_YhbG, The ABC FT transporters belonging to the YhbG family are similar to FT members of the Mj1267_LivG family, which is involved in the FT transport of branched-chain amino acids" FT /inference="protein motif:CDD:AppF, ABC-type oligopeptide FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:ArpD, ABC-type FT protease/lipase transport system, ATPase and permease FT components [General function prediction only]" FT /inference="protein motif:CDD:ArtP, ABC-type arginine FT transport system, ATPase component [Amino acid transport FT and metabolism]" FT /inference="protein motif:CDD:BtuD, ABC-type cobalamin FT transport system, ATPase component [Coenzyme metabolism]" FT /inference="protein motif:CDD:CbiO, ABC-type cobalt FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:CcmA, ABC-type multidrug FT transport system, ATPase component [Defense mechanisms]" FT /inference="protein motif:CDD:CcmA, ABC-type transport FT system involved in cytochrome c biogenesis, ATPase FT component [Posttranslational modification, protein FT turnover, chaperones]" FT /inference="protein motif:CDD:CeuD, ABC-type enterochelin FT transport system, ATPase component [Inorganic ion transport FT and metabolism]" FT /inference="protein motif:CDD:COG1123, ATPase components of FT various ABC-type transport systems, contain duplicated FT ATPase [General function prediction only]" FT /inference="protein motif:CDD:COG1245, Predicted ATPase, FT RNase L inhibitor (RLI) homolog [General function FT prediction only]" FT /inference="protein motif:CDD:COG3638, ABC-type FT phosphate/phosphonate transport system, ATPase component FT [Inorganic ion transport and metabolism]" FT /inference="protein motif:CDD:COG3845, ABC-type FT uncharacterized transport systems, ATPase components FT [General function prediction only]" FT /inference="protein motif:CDD:COG4136, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4152, ABC-type FT uncharacterized transport system, ATPase component [General FT function prediction only]" FT /inference="protein motif:CDD:COG4172, ABC-type FT uncharacterized transport system, duplicated ATPase FT component [General function prediction only]" FT /inference="protein motif:CDD:COG4181, Predicted ABC-type FT transport system involved in lysophospholipase L1 FT biosynthesis