ID CP000064; SV 1; circular; genomic DNA; STD; PRO; 5104 BP. XX AC CP000064; XX PR Project:PRJNA13478; XX DT 12-JAN-2006 (Rel. 86, Created) DT 08-MAR-2010 (Rel. 104, Last updated, Version 3) XX DE Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-III, complete DE sequence. XX KW . XX OS Aster yellows witches'-broom phytoplasma AYWB OC Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; OC Candidatus Phytoplasma; Candidatus Phytoplasma asteris. OG Plasmid pAYWB-III XX RN [1] RP 1-5104 RX DOI; 10.1128/JB.188.10.3682-3696.2006. RX PUBMED; 16672622. RA Bai X., Zhang J., Ewing A., Miller S.A., Radek A., Schevchenko D., RA Tsukerman K., Walunas T., Lapidus A., Campbell J.W., Hogenhout S.A.; RT "Living with genome instability: the adaptation of phytoplasmas to diverse RT environments of their insect and plant hosts"; RL J. Bacteriol. 188(10):3682-3696(2006). XX RN [2] RP 1-5104 RA Bai X., Hogenhout S.A.; RT ; RL Submitted (06-APR-2005) to the INSDC. RL Department of Entomology, The Ohio State University - OARDC, 1680 Madison RL Avenue, Wooster, OH 44691, USA XX DR GR; CP000064_GR. XX FH Key Location/Qualifiers FH FT source 1..5104 FT /organism="Aster yellows witches'-broom phytoplasma AYWB" FT /plasmid="pAYWB-III" FT /host="Lactuca sativa" FT /mol_type="genomic DNA" FT /db_xref="taxon:322098" FT misc_feature 1..5104 FT /note="Sequencing Center: Integrated Genomics, Inc., 2201 FT W. Campbell Park Dr., Chicago IL 60612" FT gene 1..1107 FT /gene="repA" FT /locus_tag="AYWB_pIII01" FT /note="pAYWBIII01" FT CDS 1..1107 FT /codon_start=1 FT /transl_table=11 FT /gene="repA" FT /locus_tag="AYWB_pIII01" FT /product="RepA" FT /db_xref="GOA:Q2NIE5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="UniProtKB/TrEMBL:Q2NIE5" FT /protein_id="ABC65798.1" FT /translation="MKKTKFQKNAKDIFLTYSKCPLGKDKIHNYIKEIMISKKQEISYI FT ISNTENHQDHKEIHTHVLFQLTKRFNIQSDRFFDIEGFHPRIETARNIEKSISYIKKDG FT DFIEEGTPRHKKYVRQNQKEERKQLIYDEIDRLIEKYYHDDKLTLNQVKKSLNDFIKIL FT DRDFYYEKIDFVEQVLNKKFTKKKEELEDEEEFFKPDYSFDSFKSNSKTNEIIEAINQQ FT LSVQSLGKRPKSIVIEGPSRLGKTEFILSYLTHINLHYNYTRGEFDFSKQNHKNAYKIN FT IFDDISLTRIRKEGLIKDIIGGQKGFSYNVKYAPKRTIAGKKLSIFLVNPDISFENYCE FT WSRNKGYKYHEYLEDNCIFIYVPDKLYH" FT gene complement(2542..3165) FT /locus_tag="AYWB_pIII02" FT /note="pAYWBIII02" FT CDS complement(2542..3165) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="AYWB_pIII02" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q2NIE4" FT /protein_id="ABC65799.1" FT /translation="MNFFNKNKKINLKKIILLITSVFLILINFKINNIFSMKSEKDLKK FT ENENTINNNNLKDDTDYQFFKKKVLDPAKEKNNNNLKEGLAYFLNLMGIDGFKKEAEDL FT IKNYLKENIKKLNDSSEKFFESFTSTNNNLKDDTDYQFYKKEVLDKFETKQYEIFKEKI FT IDFIISPDTTEDKIKYALNQLVDECVNHNEEIIDKLSETFFDWE" FT gene 3278..3694 FT /locus_tag="AYWB_pIII03" FT /note="pAYWBIII03" FT CDS 3278..3694 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="AYWB_pIII03" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q2NIE3" FT /protein_id="ABC65800.1" FT /translation="MQILSFNIDQFILKINDYATIIISFLKNTFNNIIAIKNCNFFNLL FT NSTGIIINFLFSILYILIFITLLVFLCSIFNIIKTIIKWILYPFKLLIICIIKIISKLI FT PKSSIKQSITIDKYLIELQENISDLESKNNLMMK" FT gene 3733..3885 FT /locus_tag="AYWB_pIII04" FT /note="pAYWBIII04" FT CDS 3733..3885 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="AYWB_pIII04" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q2NIE2" FT /protein_id="ABC65801.1" FT /translation="MENNNKPKSKKKIFIIWGLFISGVILVLLMLLLLAINKPQPKIEK FT LNQQH" FT gene 3933..4208 FT /locus_tag="AYWB_pIII05" FT /note="pAYWBIII05" FT CDS 3933..4208 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="AYWB_pIII05" FT /product="conserved hypothetical protein" FT /db_xref="InterPro:IPR021348" FT /db_xref="UniProtKB/TrEMBL:Q2NIE1" FT /protein_id="ABC65802.1" FT /translation="MNKIEKEVDKLTQQQEQTPSLKYPPKTYYQNDGIKIRNIQEHNQN FT TGIIKKSTHFYDDGKTIRKINEYNDFNLIKEIYYNQDGTIKETKTF" FT gene 4211..4582 FT /locus_tag="AYWB_pIII06" FT /note="pAYWBIII06" FT CDS 4211..4582 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="AYWB_pIII06" FT /product="conserved hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:Q2NIE0" FT /protein_id="ABC65803.1" FT /translation="MNKKRKIILKIWIIFISILILIMLFLLGLKLPKLLKSKQQQDNNK FT VETQFPYQNQYIHDTNKFENIIGLMNSLKRLKELKKQQKEIKQQQKQTEYQYKTEFDDE FT NKLVKDIAVVNPFSRLAQL" FT gene 4678..5052 FT /gene="ssb" FT /locus_tag="AYWB_pIII07" FT /note="pAYWBIII07" FT CDS 4678..5052 FT /codon_start=1 FT /transl_table=11 FT /gene="ssb" FT /locus_tag="AYWB_pIII07" FT /product="single-stranded DNA binding protein" FT /db_xref="GOA:Q2NID9" FT /db_xref="InterPro:IPR000424" FT /db_xref="InterPro:IPR011344" FT /db_xref="InterPro:IPR012340" FT /db_xref="InterPro:IPR016027" FT /db_xref="UniProtKB/TrEMBL:Q2NID9" FT /protein_id="ABC65804.1" FT /translation="MLNKVQLIGNITHDLEPTHINTNEGQISKLDFQIAVNNKDKTQFI FT PCVVFRNQAENMSMYLHKGSKVYLEGTLSIEKYTNNEGENKTATKVIVQKVIFLDSKNV FT KQVIEKEPKSSFDDWVKLNN" XX SQ Sequence 5104 BP; 2152 A; 577 C; 534 G; 1841 T; 0 other; atgaaaaaaa ctaagtttca aaaaaatgca aaagacatct ttttaactta ttcaaaatgt 60 cctttaggta aagataaaat tcataattat ataaaagaaa taatgatatc taaaaaacaa 120 gaaatttcat atatcatttc taatactgaa aaccatcaag accataaaga aatacatact 180 catgttcttt ttcaattaac taaacgtttt aatattcaaa gtgatagatt ctttgacatt 240 gaaggtttcc atcctagaat tgaaactgct cgtaatatag aaaaatcaat ttcttatata 300 aaaaaagatg gcgacttcat tgaagaaggc acccctagac ataaaaaata tgttcgtcaa 360 aatcaaaaag aagaacgtaa acaattaata tatgatgaaa tagacagatt aatagaaaaa 420 tattatcatg atgataaatt aactttaaat caagttaaaa aatctcttaa tgattttatt 480 aaaattctag accgtgattt ttattacgaa aaaatagatt ttgtagaaca agttttaaat 540 aaaaaattca ctaaaaaaaa agaagagtta gaagatgaag aagaattttt caaacctgat 600 tattctttcg attcattcaa atctaactct aaaactaatg agataattga ggctataaat 660 caacaattat cagttcaatc attaggcaaa cgacctaaat ccattgttat tgaaggacct 720 agtagactcg gtaaaaccga gtttatatta agttatctaa cccacataaa ccttcactat 780 aattatacca gaggtgaatt tgattttagt aaacaaaatc ataaaaatgc ttataaaatc 840 aatatttttg atgacataag tcttactaga attagaaaag aaggtttgat aaaagatatt 900 ataggtggtc aaaaaggatt tagttataat gtcaaatatg ctcctaaaag aactatagct 960 ggaaagaagt taagtatctt tttagttaat cctgatatct catttgaaaa ttattgtgaa 1020 tggtctcgca ataaaggata taaatatcat gaatatctag aagataattg tattttcata 1080 tatgttcctg ataagttata tcactaataa atgaaataac ttaaaattat taaaaaaagg 1140 agaaaaaaat gactggtttg gaacttttta taactctttt agtaatggga tctttatata 1200 tttttatcac ttgtaaataa ttgataaaat taaaattaga aagttatttt gaatatgtat 1260 ttaagcttaa aaaaaataaa atttagttct aaattttatt taattatatt tatttttatt 1320 tatttattat taaattttta tcaaaaaaat ttagtttttg ctatgaagaa taataattca 1380 aattatattg tagaacaaga tttaatacca aaaaaaagta atgattctga aatgattgat 1440 attaaaattt tagacaaata ttcagaaaca gaaaatgaaa cgaaagaaat aataatatca 1500 tttaaaaaat ttctacatag aataagaata atacaagaaa taacacaaca aaatataaat 1560 aaactaatat atacattgaa taaaatgaaa aaaattatta atattttaga aaccaataat 1620 aaaaatttag aagatgaaaa taaaaaatta agagaagaag ttaacttatt aaagaatctt 1680 aaataaatta aaaatcaata aaaaataagc ccctaattta ataggggctt taaaaatata 1740 aaaattgtct tcctcgaaat gttaatttta ttcaatatat caattttata atacctctaa 1800 aacgaattat tttatacata tattcaattt taaattaaat taattataac aggtatccaa 1860 atacgagcag agcgaactag gctgccagcc gaagaacatt acaattaatc tattacaccc 1920 tttcctataa agtccactct gtttatttag tgttttttta cattaaaaat tcgttaggtt 1980 tttcctcaat gtaactgtca aactttataa tataagttaa atgtgtatgc tttttttcat 2040 tttactaggt atttacttac ttatgtgcgc gtgctgtaag attccagcgt aagcgcacat 2100 aaggtttttc ctaatgattt ttttttatac atatagcata cacattgcaa tgtgtatgct 2160 ttttttaaaa tgtgtatgct tttttaattt cctcttttct ccttacctgt gaactatcgg 2220 gtaaggagta gcgagaacga aacaaccgcc tttgctgctt taggcagtaa aggagtaggt 2280 tggagagtcc atttaaaata ttaaaataat atatttttgg tataatataa gtgtatttac 2340 ttggactctt atttaaagtt tattttttac atctaaaaaa tgttaaaatt ataaatgact 2400 ctatatatat gttcgtccaa gtacgtatat gtagggtcat ttttgttata ttaagctata 2460 ttaaaaaaat ataaaaaaat aactccctat tattttaggg agttatataa taaataaaat 2520 atcaaaaaac aaaattaata attattccca atcaaaaaaa gtttcactta atttatcaat 2580 tatttcttca ttatgattta cacattcatc aacaagttgg ttcaatgcat attttatctt 2640 atcttcagta gtatctggtg atataataaa atcaattatt ttttctttaa atatttcata 2700 ttgttttgtt tcaaatttat ctaatacttc ctttttataa aattgataat ctgtgtcatc 2760 ttttaaatta ttatttgttg aagtaaaact ttcaaagaat ttttcagatg aatcattaag 2820 ttttttaata ttttctttca aataattttt aataagatct tcagcttctt ttttaaaacc 2880 atctatgccc attaaattta gaaaataagc taaaccttct tttaaattat tattattttt 2940 ttcttttgca ggatccaata cttttttttt aaaaaattga taatctgtgt catcttttaa 3000 attattatta tttattgtat tttcattctc tttttttaaa tctttttctg atttcataga 3060 aaaaatattg ttaattttaa aattaattaa aattaaaaaa actgaagtta ttagtaaaat 3120 tatttttttt aagttaattt ttttattttt attaaaaaaa ttcattttta aaaaacctct 3180 ttttttatat atttatatta aaaaaaaaat agctatataa atcctttttc tcatcaaaga 3240 aaattttata taactatcca cgaaaggatg cataaaaatg caaatattaa gttttaacat 3300 agatcaattt attttgaaaa taaatgacta tgccactatt attatatcat tccttaaaaa 3360 cacttttaac aatataattg ctattaaaaa ttgtaatttt tttaatttat taaatagtac 3420 aggaataata attaattttc ttttttctat attatatatt ttaatattta ttaccttatt 3480 agttttttta tgttctatct ttaacattat aaaaacaata atcaaatgga ttttatatcc 3540 gtttaaatta ttaattatat gtattataaa aattataagt aaattaattc ctaaatcatc 3600 tattaaacaa tcaattacaa ttgataaata tttaattgaa ttacaagaaa atatatctga 3660 tttagaatct aaaaacaatt taatgatgaa ataatacatt aaaaaaaaca acaatcaaag 3720 gagataataa aattggaaaa caacaacaaa ccaaaatcaa aaaaaaaaat atttatcatt 3780 tggggtttat ttattagtgg agttattctt gttcttttaa tgcttctttt attagctatc 3840 aataaacctc aacctaaaat agaaaaacta aatcaacaac attaaaatct aatattaatg 3900 ccgaacaaga acaagaaacc tataatagac ttatgaataa aattgaaaaa gaagttgata 3960 aattaaccca acaacaagaa caaactccat cacttaaata tcctcctaaa acttattatc 4020 aaaatgatgg tataaaaatt agaaatattc aagaacataa ccaaaacaca gggattatta 4080 aaaaatcaac tcatttttat gatgatggca aaacaattag aaaaattaat gaatataatg 4140 attttaactt aattaaagaa atttattaca accaagatgg aactattaaa gaaactaaaa 4200 cattttaatc atgaataaaa aaagaaaaat tatattaaag atttggatta tatttatatc 4260 aattcttatt ttaatcatgt tatttctttt aggtttaaaa ttacctaaat tacttaaatc 4320 aaaacaacaa caagataata ataaagttga aactcaattt ccatatcaaa accaatatat 4380 tcatgatact aataaatttg aaaatataat tggtttaatg aattctttaa aacgtttaaa 4440 agaattaaaa aaacaacaaa aagaaataaa acaacagcaa aaacaaactg aatatcaata 4500 taaaaccgaa tttgatgatg aaaataaatt agttaaagat atagcagttg taaacccttt 4560 ctcacgactg gcgcagttgt aattggttgt ctatttctag ctcctatttt tgcatctgta 4620 gttccaattg cagctcctgt tgctttatta ctttaatatt aagaaaggag aaatcaaatg 4680 ttaaataaag ttcaattaat aggtaatata actcatgact tagagccaac acatattaat 4740 actaatgagg gtcaaatatc taaattagat tttcaaatag ctgtaaataa taaagataaa 4800 actcaattca ttccatgtgt tgtttttaga aaccaagctg aaaacatgag tatgtattta 4860 cataaaggtt caaaagtata tttagaagga acgttatcaa ttgaaaaata taccaataac 4920 gaaggcgaaa ataaaactgc tactaaagta atagttcaaa aagttatttt tttagatagt 4980 aaaaatgtta aacaagtaat tgaaaaggaa cctaaatcat catttgatga ttgggtaaaa 5040 ttaaataatt aataaaacaa aggcccctat ttaattaggg gcttatacaa gaaagagttt 5100 ataa 5104 //