ID   CM000854; SV 1; circular; genomic DNA; CON; PRO; 1702833 BP.
XX
AC   CM000854; ADGL01000000;
XX
PR   Project:PRJNA33777;
XX
DT   18-JAN-2010 (Rel. 103, Created)
DT   18-JAN-2010 (Rel. 103, Last updated, Version 1)
XX
DE   Campylobacter jejuni subsp. jejuni 1336 chromosome, whole genome shotgun
DE   sequence.
XX
KW   .
XX
OS   Campylobacter jejuni subsp. jejuni 1336
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Campylobacteraceae; Campylobacter.
XX
RN   [1]
RP   1-1702833
RA   Hepworth P.J., Ashelford K.E., Hinds J., William N.J., Leatherbarr H.,
RA   Fren N., Birtl R.J., Mendonc C., Dorrel B., Wren B.W., Hall N.,
RA   Winstanley C.;
RT   "Divergence of water and wildlife-associated Campylobacter jejuni niche
RT   specialists from food-chain-associated clonal complexes";
RL   Unpublished.
XX
RN   [2]
RP   1-1702833
RA   Hepworth P.J., Ashelford K.E., Hinds J., William N.J., Leatherbarr H.,
RA   Fren N., Birtl R.J., Mendonc C., Dorrel B., Wren B.W., Hall N.,
RA   Winstanley C.;
RT   ;
RL   Submitted (13-OCT-2009) to the INSDC.
RL   School of Biological Sciences, The University of Liverpool, Biosciences
RL   Building, Crown Street, Liverpool L69 7ZB, UK
XX
CC   Source DNA available from Dr. Craig Winstanley at the University of
CC   Liverpool, School of Infection & Host Defense.
CC   ##Genome-Assembly-Data-START##
CC   Genome Coverage       21.65x
CC   Sequencing Technology 454
CC   ##Genome-Assembly-Data-END##
XX
CO   join(ADGL01000011.1:1..71259,gap(unk100),ADGL01000001.1:1..91364,gap(261),
CO   ADGL01000002.1:1..22097,gap(993),ADGL01000003.1:1..79434,gap(925),
CO   ADGL01000004.1:1..6633,gap(1037),ADGL01000005.1:1..153947,gap(unk100),
CO   ADGL01000026.1:1..6100,gap(unk100),ADGL01000006.1:1..126968,gap(2105),
CO   ADGL01000007.1:1..53467,gap(900),ADGL01000008.1:1..451,gap(2845),
CO   ADGL01000009.1:1..87843,gap(2475),ADGL01000010.1:1..3036,gap(unk100),
CO   complement(ADGL01000035.1:1..38077),gap(524),
CO   complement(ADGL01000034.1:1..20318),gap(466),
CO   complement(ADGL01000033.1:1..5116),gap(515),
CO   complement(ADGL01000032.1:1..65581),gap(726),
CO   complement(ADGL01000031.1:1..659),gap(878),
CO   complement(ADGL01000030.1:1..15946),gap(1545),
CO   complement(ADGL01000029.1:1..5113),gap(937),
CO   complement(ADGL01000028.1:1..6878),gap(906),
CO   complement(ADGL01000027.1:1..1041),gap(unk100),ADGL01000012.1:1..6351,
CO   gap(931),ADGL01000013.1:1..779,gap(1470),ADGL01000014.1:1..1175,gap(913),
CO   ADGL01000015.1:1..9122,gap(225),ADGL01000016.1:1..305470,gap(1350),
CO   ADGL01000017.1:1..147781,gap(603),ADGL01000018.1:1..22222,gap(766),
CO   ADGL01000019.1:1..1197,gap(527),ADGL01000020.1:1..80629,gap(624),
CO   ADGL01000021.1:1..1639,gap(384),ADGL01000022.1:1..37359,gap(603),
CO   ADGL01000023.1:1..94425,gap(1037),ADGL01000024.1:1..104547,gap(222),
CO   ADGL01000025.1:1..516,gap(unk100))
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1702833
FT                   /organism="Campylobacter jejuni subsp. jejuni 1336"
FT                   /sub_species="jejuni"
FT                   /strain="1336"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:683082"
FT   gap             71260..71359
FT                   /estimated_length=unknown
FT   gap             162724..162984
FT                   /estimated_length=261
FT   gap             185082..186074
FT                   /estimated_length=993
FT   gap             265509..266433
FT                   /estimated_length=925
FT   gap             273067..274103
FT                   /estimated_length=1037
FT   gap             428051..428150
FT                   /estimated_length=unknown
FT   gap             434251..434350
FT                   /estimated_length=unknown
FT   gap             561319..563423
FT                   /estimated_length=2105
FT   gap             616891..617790
FT                   /estimated_length=900
FT   gap             618242..621086
FT                   /estimated_length=2845
FT   gap             708930..711404
FT                   /estimated_length=2475
FT   gap             714441..714540
FT                   /estimated_length=unknown
FT   gap             752618..753141
FT                   /estimated_length=524
FT   gap             773460..773925
FT                   /estimated_length=466
FT   gap             779042..779556
FT                   /estimated_length=515
FT   gap             845138..845863
FT                   /estimated_length=726
FT   gap             846523..847400
FT                   /estimated_length=878
FT   gap             863347..864891
FT                   /estimated_length=1545
FT   gap             870005..870941
FT                   /estimated_length=937
FT   gap             877820..878725
FT                   /estimated_length=906
FT   gap             879767..879866
FT                   /estimated_length=unknown
FT   gap             886218..887148
FT                   /estimated_length=931
FT   gap             887928..889397
FT                   /estimated_length=1470
FT   gap             890573..891485
FT                   /estimated_length=913
FT   gap             900608..900832
FT                   /estimated_length=225
FT   gap             1206303..1207652
FT                   /estimated_length=1350
FT   gap             1355434..1356036
FT                   /estimated_length=603
FT   gap             1378259..1379024
FT                   /estimated_length=766
FT   gap             1380222..1380748
FT                   /estimated_length=527
FT   gap             1461378..1462001
FT                   /estimated_length=624
FT   gap             1463641..1464024
FT                   /estimated_length=384
FT   gap             1501384..1501986
FT                   /estimated_length=603
FT   gap             1596412..1597448
FT                   /estimated_length=1037
FT   gap             1701996..1702217
FT                   /estimated_length=222
FT   gap             1702734..1702833
FT                   /estimated_length=unknown
FT   gene            complement(770..1603)
FT                   /locus_tag="C1336_000180000"
FT                   /note="C1336_000180000 identified by Glimmer3 with a raw
FT                   score of 10.98."
FT   CDS             complement(770..1603)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180000"
FT                   /product="CysQ"
FT                   /note="C1336_000180000 identified by Glimmer3 with a raw
FT                   score of 10.98. Gene function extrapolated from C8J_1579
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 68 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31076.1"
FT                   /translation="MEIKNSTKSSCIILKNLIESLIIMLNLDKFLEIAINASNQASKAI
FT                   LEERKNFKTWEKEDKSPLTSADLASNKILNDILGSTDIKILSEEKLLSKEECEELKTFW
FT                   LIDPLDGTSGFLKGSDEFCVMISLVHDNRPVLSLIQNPSKGDIFYAHAKTKVYKNDKPL
FT                   QIDQQEYEKNKYKALLSVNHLSKEDEDFAKEHQLEAINIGSGLKFCAILEAKAGVYKRF
FT                   EKLNIWDIVAGDFLINQNGGFMGDFSKKYILYNPLNYKSSPFICVSSMNFLQDFL"
FT   gene            complement(1615..2883)
FT                   /locus_tag="C1336_000180001"
FT                   /note="C1336_000180001 identified by Glimmer3 with a raw
FT                   score of 13.22."
FT   CDS             complement(1615..2883)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180001"
FT                   /product="citrate synthase"
FT                   /note="C1336_000180001 identified by Glimmer3 with a raw
FT                   score of 13.22. Gene function extrapolated from C8J_1580
FT                   (CP000814.1) after blastn alignment (98.66 percent identity
FT                   over a 1269 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31077.1"
FT                   /translation="MSNSVTITDNRNGKSYEFPIYDGTTGPSVVDISSFYKQTGMFSYD
FT                   EGLTSTATCKSKITYIDGENGILMHRGYPIEWLAENKLYLDVVHLLLYKELPDATRLEA
FT                   FRYEMKKRSFIHEGMHRLFDSFPDNAHPMAVLQGAVSSLSAFYPDHLNMNVKEEYMEMA
FT                   ARIVAKIPTIVATAYRYKHGFPMAYPNLDRGFTENFLYMLRTYPYDHVELKPIEVKALD
FT                   TVFMLHADHEQNASTSTVRAVGSTHAHPYACIAAGIGALWGHAHGGANEGVIRMLEQIG
FT                   SVDRVDEFIKRAKDKNDPFRLMGFGHRVYKNFDPRAKVLKKLRDQLIDELGIDTNLIKV
FT                   ATRIEEIALNDDYFVQRGLYPNVDFHSGLILKALGIPNEMFATLFVIGRTPGWIAQWIE
FT                   QKEQESLKIVRPRQLYLGETSKI"
FT   gene            complement(2998..4173)
FT                   /locus_tag="C1336_000180002"
FT                   /note="C1336_000180002 identified by Glimmer3 with a raw
FT                   score of 10.05."
FT   CDS             complement(2998..4173)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180002"
FT                   /product="sodium/hydrogen exchanger family protein"
FT                   /note="C1336_000180002 identified by Glimmer3 with a raw
FT                   score of 10.05. Gene function extrapolated from C8J_1581
FT                   (CP000814.1) after blastn alignment (99.14 percent identity
FT                   over a 811 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31078.1"
FT                   /translation="MHQSVIDPQGLIDLKILIVIALCLLFSPHIAKILRLPLSATEIIL
FT                   GAIIAYFGFIGKSENFALLANVGFYYLMFIAGMEVNLRAFFNMDKEVVKKSFFYIFLLY
FT                   ALSSFIVWIFGLSLVFIIIIPVMSVGLLSLLFKDFGKECYWLNIAMIVATLAEVISIVL
FT                   LTIAGAFLREGTGIIDVVQSILYLNIFLGLCLLGFKMLGVLFWWYPQLKVVLMPWEDKN
FT                   EKDIRFCMAIFILIIVAMVITKLEIVLGSFIAGSFIATFFDHKKDLEHKLSTFGHGFLI
FT                   PIFFIHIGSTFDLKMILDYKIVLQAFLLMFVMVGLRILCASVFLKRIGFKNMILFGLSH
FT                   SMPLTLLIATATLGYSGKVIDEKLYSALILTALFEAIIVMSMIKFLSNSKK"
FT   gene            complement(4154..4990)
FT                   /locus_tag="C1336_000180003"
FT                   /note="C1336_000180003 identified by Glimmer3 with a raw
FT                   score of 14.81."
FT   CDS             complement(4154..4990)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180003"
FT                   /product="putative biotin synthase"
FT                   /note="C1336_000180003 identified by Glimmer3 with a raw
FT                   score of 14.81. Gene function extrapolated from Cj1685c
FT                   (AL111168.1) after blastn alignment (97.97 percent identity
FT                   over a 837 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31079.1"
FT                   /translation="MQIMLCAISNIASGNCSEDCKYCTQSAHVKTDIQKYRRKELSQIV
FT                   LEAKMAKKNEALGFCLVTAGLGLDDEKLEYVCEAAKAVQKEVPNLLLIACNGMASVEQL
FT                   KELKKAGIFSYNHNLETSKEFFPQICTTHTWESRFQTNLNAKEAGLMLCCGGIYGMGES
FT                   EEDRLSFRKSLQELQPFSTPINFFIANENLKLQVPRLSADEALKIVRDTKEALPQSVVM
FT                   VAGGREVVLRERQYEIFQAGAGAIVIGDYLTTKGEEPSQDIIKLKEMGFTFASECH"
FT   gene            complement(4992..7094)
FT                   /locus_tag="C1336_000180004"
FT                   /note="C1336_000180004 identified by Glimmer3 with a raw
FT                   score of 14.15."
FT   CDS             complement(4992..7094)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180004"
FT                   /product="DNA topoisomerase I"
FT                   /note="C1336_000180004 identified by Glimmer3 with a raw
FT                   score of 14.15. Gene function extrapolated from C8J_1583
FT                   (CP000814.1) after blastn alignment (98.67 percent identity
FT                   over a 75 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31080.1"
FT                   /translation="MKKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGIK
FT                   IEDDEFIPEYRITSDHSALVKELKSKAKDAKEVYLATDEDREGEAIAYHIAKAIGKDEN
FT                   TLPRIVFHEITKSAIENALKNPRKLDMHSVNAQQTRRLLDRIVGYKLSPLLGQKIQRGL
FT                   SAGRVQSAALKIIVDREKEIRAFVPLEYFSIDMIFQKDLDAELVEFDKAKIEKLTIINK
FT                   DRAKLVLEACKNEAYTISDIESKERKIAPPPPFMTSTLQQSASNRLGFNPKKTMMIAQK
FT                   LYEGVNTHEGVMGVITYMRTDSLNLAKEAIENARKFIQANFGQDYLPSKANVYTTKAKG
FT                   AQEAHEAIRPTNLSFTPEIAAKFLDKDELKLYTLIYNRFLACQMNPAISQTQNVFVKND
FT                   RAVFKISGRKILFDGYYKVYGDMDKDKILPNFKIGENLKIQNLEMNSHFTEPPSRYSEA
FT                   GLVKKLESLGIGRPSTYAPTISILTSRDYVKIDKKQLIPSEVAFNVTEVLEKNFSDIVD
FT                   SKFTSNLENTLDEIAEDKADWQETLKEFYYPFMRKIEEGKTKIASQKTVTKLGESCPDC
FT                   GGELAIRKGRFGEFVACLNFPKCKYSRNLKSESKNESENTAAKAKANGTGITCPSCQKG
FT                   EIVERFSKRGKFYGCSAYPKCNFISKYKPSEEKCEECGETLVIKELKKGTFLECLKCKI
FT                   KKEMKD"
FT   gene            7269..8540
FT                   /locus_tag="C1336_000180005"
FT                   /note="C1336_000180005 identified by Glimmer3 with a raw
FT                   score of 8.65."
FT   CDS             7269..8540
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180005"
FT                   /product="major facilitator superfamily protein"
FT                   /note="C1336_000180005 identified by Glimmer3 with a raw
FT                   score of 8.65. Gene function extrapolated from
FT                   CJJ81176_1679 (CP000538.1) after blastn alignment (98.95
FT                   percent identity over a 191 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31081.1"
FT                   /translation="MNGKTYKFHPNDTKMDKKIIQITEKSGFKAAVFSMAAMTMLGSVV
FT                   ISSALPAINRHFEELLTQSGATLASSFTLAHLDILVRLVLTIPAIFVVILSPFAGILMD
FT                   KFGKLKFILPAMVVWTISGVSGFFLNDIYAILTSRAIFGMATAFIMTGASALLGDYYSR
FT                   GGFNRRENALSLQGFFCAVGGAIFISIAGFVSSYSWRYPFLVYGLGILITLMVIIYLFE
FT                   PRKFKFYNHTKIEAKTNYWQFFPIYFIGFFIMVVYYISPTQLPYYIEEHLRLDPKYIGI
FT                   SMSVSALCYGFFSLSYRYIIKFLSIKTIYVLTLFIVSCSFLLLFLVDSFFTVLIALALL
FT                   GMGGGIMLVNNTAYLFSICPENARARAYGILASCIFLGQFLSPIISQPIVRQMGLVDAF
FT                   LIWSIVIFIVCIVFLFLKQKPRIN"
FT   gene            complement(8568..9833)
FT                   /locus_tag="C1336_000180006"
FT                   /note="C1336_000180006 identified by Glimmer3 with a raw
FT                   score of 13.92."
FT   CDS             complement(8568..9833)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180006"
FT                   /product="preprotein translocase secY subunit"
FT                   /note="C1336_000180006 identified by Glimmer3 with a raw
FT                   score of 13.92. Gene function extrapolated from C8J_1592
FT                   (CP000814.1) after blastn alignment (98.77 percent identity
FT                   over a 892 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31082.1"
FT                   /translation="MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQNN
FT                   ALGLFNVFSGGAAERFSIISLGIMPYITASIIMELLAATFPNIGKMKKERDSMQKYMQI
FT                   IRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLMWLG
FT                   EQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILITIGVI
FT                   IYVELGERRIPISYSRKVVMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPTTILQT
FT                   STNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQGGFIPGI
FT                   RPGEGTSNYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFHFGGTSVLIVVQVALD
FT                   TMRKIEAQIYMSKYQTLSAVGL"
FT   gene            complement(9833..10225)
FT                   /locus_tag="C1336_000180007"
FT                   /note="C1336_000180007 identified by Glimmer3 with a raw
FT                   score of 14.37."
FT   CDS             complement(9833..10225)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180007"
FT                   /product="ribosomal protein L15"
FT                   /note="C1336_000180007 identified by Glimmer3 with a raw
FT                   score of 14.37. Gene function extrapolated from
FT                   CJJ81176_1686 (CP000538.1) after blastn alignment (98.98
FT                   percent identity over a 393 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31083.1"
FT                   /translation="MNLTKAAGSTHKTKRIGRGQGSGMGKTATKGGKGQTARKGYNEKR
FT                   GFEGGQQPLQRRLPKVGFTSKIQKPYVINVEKITAIKELSEITFESVKSVHKISKSVNK
FT                   IKLIGASAKDLVSKIKDENISVTGSK"
FT   gene            complement(10230..10673)
FT                   /locus_tag="C1336_000180008"
FT                   /note="C1336_000180008 identified by Glimmer3 with a raw
FT                   score of 14.23."
FT   CDS             complement(10230..10673)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180008"
FT                   /product="30S ribosomal protein S5"
FT                   /note="C1336_000180008 identified by Glimmer3 with a raw
FT                   score of 14.23. Gene function extrapolated from C8J_1594
FT                   (CP000814.1) after blastn alignment (99.77 percent identity
FT                   over a 444 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31084.1"
FT                   /translation="MEKYNREEFEEVIVDIGRVTKVVKGGRRFRFTALVIVGNRKGLVG
FT                   VGYGKAKEVPDAIRKAVDDAFKNIVEVKTKGSTIAHDVEVKYNASRILLKPASEGTGVI
FT                   AGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLKG"
FT   gene            complement(10685..11041)
FT                   /locus_tag="C1336_000180009"
FT                   /note="C1336_000180009 identified by Glimmer3 with a raw
FT                   score of 15.16."
FT   CDS             complement(10685..11041)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180009"
FT                   /product="ribosomal protein L18"
FT                   /note="C1336_000180009 identified by Glimmer3 with a raw
FT                   score of 15.16. Gene function extrapolated from C8J_1595
FT                   (CP000814.1) after blastn alignment (98.60 percent identity
FT                   over a 357 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31085.1"
FT                   /translation="MRANVLKRKLTLRIKRKKRIRAKISGCENFPRISVFKSNRTLYIQ
FT                   AIDDAKAVTLAAVDGRKLGVKANKEGAKKIAAEFAKTLKAKKIEQAVFDRNGYVYHGVI
FT                   AVLAESLRENGIRL"
FT   gene            complement(11051..11587)
FT                   /locus_tag="C1336_000180010"
FT                   /note="C1336_000180010 identified by Glimmer3 with a raw
FT                   score of 14.78."
FT   CDS             complement(11051..11587)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180010"
FT                   /product="ribosomal protein L6"
FT                   /note="C1336_000180010 identified by Glimmer3 with a raw
FT                   score of 14.78. Gene function extrapolated from
FT                   CJJ81176_1689 (CP000538.1) after blastn alignment (99.63
FT                   percent identity over a 537 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31086.1"
FT                   /translation="MSRIGKQPIAIPAGVEVKLEGNLLKFKKGNLAKELDTKANVNVEI
FT                   KDNNILFSPKGEDRQSRAYWGTYRALAYNIVVGLTQGFSKTLEINGVGYKAALKGKVLE
FT                   LSLGFSHPINYDIPEGIEIVVDKNTIAVKGSDKQVVGQVAAQIREFRPPEPYKGKGVKY
FT                   SDERIIRKAGKTSKK"
FT   gene            complement(11666..12061)
FT                   /locus_tag="C1336_000180011"
FT                   /note="C1336_000180011 identified by Glimmer3 with a raw
FT                   score of 16.21."
FT   CDS             complement(11666..12061)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180011"
FT                   /product="ribosomal protein S8"
FT                   /note="C1336_000180011 identified by Glimmer3 with a raw
FT                   score of 16.21. Gene function extrapolated from
FT                   CJJ81176_1690 (CP000538.1) after blastn alignment (98.48
FT                   percent identity over a 396 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31087.1"
FT                   /translation="MINDIISDSLTRIRNAGMRKLETTKLLHSKVVEALVGIFQAKGYI
FT                   ESFNVIEEDKKKFINVVLKYDEKGKSVINELKRISKPGRRVYKGKDEIKRFKNGYGTIV
FT                   VSTSRGVLANDEAYKAGVGGEILCTIW"
FT   gene            complement(12071..12256)
FT                   /locus_tag="C1336_000180012"
FT                   /note="C1336_000180012 identified by Glimmer3 with a raw
FT                   score of 8.79."
FT   CDS             complement(12071..12256)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180012"
FT                   /product="30S ribosomal protein S14"
FT                   /note="C1336_000180012 identified by Glimmer3 with a raw
FT                   score of 8.79. Gene function extrapolated from Cj1694c
FT                   (AL111168.1) after blastn alignment (99.46 percent identity
FT                   over a 186 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31088.1"
FT                   /translation="MAKKSMIAKAARKPKFKVRAYTRCQICGRPHSVYRDFGICRVCLR
FT                   KMGNEGLIPGLKKASW"
FT   gene            complement(12258..12800)
FT                   /locus_tag="C1336_000180013"
FT                   /note="C1336_000180013 identified by Glimmer3 with a raw
FT                   score of 14.34."
FT   CDS             complement(12258..12800)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180013"
FT                   /product="50S ribosomal protein L5"
FT                   /note="C1336_000180013 identified by Glimmer3 with a raw
FT                   score of 14.34. Gene function extrapolated from Cj1695c
FT                   (AL111168.1) after blastn alignment (99.08 percent identity
FT                   over a 543 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31089.1"
FT                   /translation="MRLKEKYNQSIKPALVKEFDIKNPMLIPVIEKVVISVGAGELAKD
FT                   QKVLQNVADTISLIAGQRAVITKAKKSVAGFKVREGFPVGVMVTLRKENMYAFLDKLIS
FT                   IALPRVKDFRGLSRDGFDGRGNYNFGLDEQLMFPEVEYDKILRTHGMNISIVTTAQNDK
FT                   QAQKLLELIGVPFTKGK"
FT   gene            complement(12807..13040)
FT                   /locus_tag="C1336_000180014"
FT                   /note="C1336_000180014 identified by Glimmer3 with a raw
FT                   score of 12.64."
FT   CDS             complement(12807..13040)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180014"
FT                   /product="ribosomal protein L24"
FT                   /note="C1336_000180014 identified by Glimmer3 with a raw
FT                   score of 12.64. Gene function extrapolated from
FT                   CJJ81176_1693 (CP000538.1) after blastn alignment (98.55
FT                   percent identity over a 207 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31090.1"
FT                   /translation="MAVKLKIKKGDSVKVITGDDKGKTGKVLAVYPKTLKVVVEGCKIA
FT                   KKAIKPSEKNPNGGFINKEMPMDISNVAKVQE"
FT   gene            complement(13040..13408)
FT                   /locus_tag="C1336_000180015"
FT                   /note="C1336_000180015 identified by Glimmer3 with a raw
FT                   score of 14.10."
FT   CDS             complement(13040..13408)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180015"
FT                   /product="ribosomal protein L14"
FT                   /note="C1336_000180015 identified by Glimmer3 with a raw
FT                   score of 14.10. Gene function extrapolated from
FT                   JJD26997_2071 (CP000768.1) after blastn alignment (99.22
FT                   percent identity over a 129 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31091.1"
FT                   /translation="MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYATVGDVIVASVKK
FT                   ALPNGKVKKGQVVKAVIVRTKKEIHRDNGSLIRFDENAAVILDNKREPIGTRIFGPVGR
FT                   EVRYGGFMKIVSLAPEVL"
FT   gene            complement(13408..13659)
FT                   /locus_tag="C1336_000180016"
FT                   /note="C1336_000180016 identified by Glimmer3 with a raw
FT                   score of 10.66."
FT   CDS             complement(13408..13659)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180016"
FT                   /product="ribosomal protein S17"
FT                   /note="C1336_000180016 identified by Glimmer3 with a raw
FT                   score of 10.66. Gene function extrapolated from
FT                   CJJ81176_1695 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 252 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31092.1"
FT                   /translation="MAFKREIQGVVVKIAGEKTASVLVERKVVHPRYRKIVKRFKKYLI
FT                   HDERNEVKVGDTVVAVECRPLSKRKSFRLKSVLATGVE"
FT   gene            complement(13669..13854)
FT                   /locus_tag="C1336_000180017"
FT                   /note="C1336_000180017 identified by Glimmer3 with a raw
FT                   score of 8.87."
FT   CDS             complement(13669..13854)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180017"
FT                   /product="50S ribosomal protein L29"
FT                   /note="C1336_000180017 identified by Glimmer3 with a raw
FT                   score of 8.87. Gene function extrapolated from C8J_1603
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 186 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31093.1"
FT                   /translation="MKYTEIKDKTAAELATMLKEKKVLLFTLKQKLKTMQLTNPKEISQ
FT                   VKKDIARINTAINALR"
FT   gene            complement(13841..14266)
FT                   /locus_tag="C1336_000180018"
FT                   /note="C1336_000180018 identified by Glimmer3 with a raw
FT                   score of 14.11."
FT   CDS             complement(13841..14266)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180018"
FT                   /product="ribosomal protein L16"
FT                   /note="C1336_000180018 identified by Glimmer3 with a raw
FT                   score of 14.11. Gene function extrapolated from
FT                   JJD26997_2074 (CP000768.1) after blastn alignment (99.53
FT                   percent identity over a 426 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31094.1"
FT                   /translation="MLMPKRTKYRKMMKGRNRGYANRGTEFTFGEFALKATEAGRINSR
FT                   QIEAARIALTRFVKRQGKTWIRVFPDKPLTKKPLETRMGKGKGAVEEWVMNIKPGRIIY
FT                   EMAGVSEEMAREALTLAMHKLPFKTKFVTRESQNEIY"
FT   gene            complement(14269..14970)
FT                   /locus_tag="C1336_000180019"
FT                   /note="C1336_000180019 identified by Glimmer3 with a raw
FT                   score of 17.76."
FT   CDS             complement(14269..14970)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180019"
FT                   /product="30S ribosomal protein S3"
FT                   /note="C1336_000180019 identified by Glimmer3 with a raw
FT                   score of 17.76. Gene function extrapolated from C8J_1605
FT                   (CP000814.1) after blastn alignment (98.72 percent identity
FT                   over a 702 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31095.1"
FT                   /translation="MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKR
FT                   KLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNINIK
FT                   EERKAGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMA
FT                   RTEWYLEGRVPLHTLRAKIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTEESAP
FT                   AKKPRRTRRGK"
FT   gene            complement(14970..15395)
FT                   /locus_tag="C1336_000180020"
FT                   /note="C1336_000180020 identified by Glimmer3 with a raw
FT                   score of 15.34."
FT   CDS             complement(14970..15395)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180020"
FT                   /product="ribosomal protein L22"
FT                   /note="C1336_000180020 identified by Glimmer3 with a raw
FT                   score of 15.34. Gene function extrapolated from
FT                   JJD26997_2076 (CP000768.1) after blastn alignment (97.90
FT                   percent identity over a 333 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31096.1"
FT                   /translation="MSKALIKFIRLSPTKARLIAREVQGMNAELAMASLKFMPNKGAKY
FT                   IANAISSAVANGGFEANEVIVKSCRVDAAAVLKRFRPRARGSASRIRKPTSHILVEVAK
FT                   AEVKAEEKKTVAKKTTTTKAPAKKTTSTKKATAKKES"
FT   gene            complement(15406..15687)
FT                   /locus_tag="C1336_000180021"
FT                   /note="C1336_000180021 identified by Glimmer3 with a raw
FT                   score of 8.94."
FT   CDS             complement(15406..15687)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180021"
FT                   /product="ribosomal protein S19"
FT                   /note="C1336_000180021 identified by Glimmer3 with a raw
FT                   score of 8.94. Gene function extrapolated from
FT                   JJD26997_2077 (CP000768.1) after blastn alignment (99.62
FT                   percent identity over a 261 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31097.1"
FT                   /translation="MARSLKKGPFVDDHVMKKVIAAKKANDNKPIKTWSRRSTITPDMI
FT                   GLTFNVHNGKSFIPVYITENHIGYKLGEFAPTRTFKGHKGSVQKKIGK"
FT   gene            complement(15689..16519)
FT                   /locus_tag="C1336_000180022"
FT                   /note="C1336_000180022 identified by Glimmer3 with a raw
FT                   score of 14.30."
FT   CDS             complement(15689..16519)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180022"
FT                   /product="50S ribosomal protein L2"
FT                   /note="C1336_000180022 identified by Glimmer3 with a raw
FT                   score of 14.30. Gene function extrapolated from C8J_1608
FT                   (CP000814.1) after blastn alignment (98.80 percent identity
FT                   over a 831 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31098.1"
FT                   /translation="MAIKTYKPYTPSRRYITGLSSEDITAKPSVRSLLVKLPAHAGRNS
FT                   YGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALIAYKDGEKRYI
FT                   LQPRGLSVGDIVAAAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMIRSAGAYA
FT                   QLMGKEEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRHRGIRPQTR
FT                   GSAMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDKLIISRRKGK"
FT   gene            complement(16521..16802)
FT                   /locus_tag="C1336_000180023"
FT                   /note="C1336_000180023 identified by Glimmer3 with a raw
FT                   score of 8.11."
FT   CDS             complement(16521..16802)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180023"
FT                   /product="ribosomal protein L23"
FT                   /note="C1336_000180023 identified by Glimmer3 with a raw
FT                   score of 8.11. Gene function extrapolated from
FT                   JJD26997_2079 (CP000768.1) after blastn alignment (98.58
FT                   percent identity over a 282 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31099.1"
FT                   /translation="MADITDIKTILYTEKSLNLQEQGVVVIQTSPKMTKTGLKAVLKEY
FT                   FGVTPKSINSLRMDGKVKRFRGRLGQRNDYKKFYVKLPEGVSLENTEA"
FT   gene            complement(16805..17419)
FT                   /locus_tag="C1336_000180024"
FT                   /note="C1336_000180024 identified by Glimmer3 with a raw
FT                   score of 16.37."
FT   CDS             complement(16805..17419)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180024"
FT                   /product="ribosomal protein L4"
FT                   /note="C1336_000180024 identified by Glimmer3 with a raw
FT                   score of 16.37. Gene function extrapolated from C8J_1610
FT                   (CP000814.1) after blastn alignment (98.33 percent identity
FT                   over a 299 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31100.1"
FT                   /translation="MSKVVVLNDKLEKAGELDLPSKYAEVNPHNLYLYVKSYLASLRAN
FT                   TAHAKGRSDVSGGGKKPWRQKGRGGARAGSTRTNVWVGGAVAFGPTNERNYFQKVNKKQ
FT                   KRLALERALADKAAKGALFTADSLVIESGKTKDANAVIKKLGVKDALIVKDLLDEKTLL
FT                   AYRNLANCYVVDVTEVNAYLVSVFNAVIIEKSALESITKEG"
FT   gene            complement(17416..17991)
FT                   /locus_tag="C1336_000180025"
FT                   /note="C1336_000180025 identified by Glimmer3 with a raw
FT                   score of 10.19."
FT   CDS             complement(17416..17991)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180025"
FT                   /product="50S ribosomal protein L3"
FT                   /note="C1336_000180025 identified by Glimmer3 with a raw
FT                   score of 10.19. Gene function extrapolated from C8J_1611
FT                   (CP000814.1) after blastn alignment (99.13 percent identity
FT                   over a 576 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31101.1"
FT                   /translation="MEYIVEKIGMSRTITNPSIAVTLLRVVNAKVCEVEGGKALVAYPK
FT                   GKASNKCVAGQQKKYNLSAEYNRFATLEVANTEAGDLDETPLNEAKILKVSFNTKGRGY
FT                   SGVMKRHNFAGGPASHGSRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKNEVVS
FT                   YDAENKILVVKGAVPGYNGAMGKIRIAK"
FT   gene            complement(18001..18312)
FT                   /locus_tag="C1336_000180026"
FT                   /note="C1336_000180026 identified by Glimmer3 with a raw
FT                   score of 6.81."
FT   CDS             complement(18001..18312)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180026"
FT                   /product="30S ribosomal protein S10"
FT                   /note="C1336_000180026 identified by Glimmer3 with a raw
FT                   score of 6.81. Gene function extrapolated from C8J_1612
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 312 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31102.1"
FT                   /translation="MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIK
FT                   RYTVLKSPHINKDSREQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSVEVRAMGK"
FT   gene            complement(18510..19271)
FT                   /locus_tag="C1336_000180027"
FT                   /note="C1336_000180027 identified by Glimmer3 with a raw
FT                   score of 12.80."
FT   CDS             complement(18510..19271)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180027"
FT                   /product="putative ribosomal pseudouridine synthase"
FT                   /note="C1336_000180027 identified by Glimmer3 with a raw
FT                   score of 12.80. Gene function extrapolated from Cj1709c
FT                   (AL111168.1) after blastn alignment (97.35 percent identity
FT                   over a 453 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31103.1"
FT                   /translation="MRINKFISHNTCYSRREADELIKQGLIKINNKIALLSDEVKFDDK
FT                   VFVKGKRVQKRTQFSVIIYHKQKGEIVSKKDDRGRKTIYDTLPRQFSTWLSVGRLDYAS
FT                   EGLLLLTDSPVIADALMHSDLEREYYLKVKGTVSKQVIEAMQNGLEIKNEKKGAHAKTK
FT                   ITSMSFAPFIDFEIFGSSGGYTKLRVVINEGKNRELRRFFGHFDLEVMDLKRVAFGALD
FT                   LGMLKAGKHRYLENGEYEKLRDFLKFNEIRY"
FT   gene            complement(19307..21295)
FT                   /locus_tag="C1336_000180028"
FT                   /note="C1336_000180028 identified by Glimmer3 with a raw
FT                   score of 13.67."
FT   CDS             complement(19307..21295)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180028"
FT                   /product="metallo-beta-lactamase family protein"
FT                   /note="C1336_000180028 identified by Glimmer3 with a raw
FT                   score of 13.67. Gene function extrapolated from
FT                   CJJ81176_0004 (CP000538.1) after blastn alignment (96.75
FT                   percent identity over a 1783 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31104.1"
FT                   /translation="MDENKEINKNEQNPNSNSKNNKRYKYKNRRKKLADSLQNENDTPK
FT                   IDQISNKENSENSENKTEKKKKKNRNLPSKLTGNEDWQIALAECIEANRVSHENRLHPL
FT                   KYNNSSEHKIRITPLGGLGEIGGNISVFETNKDAIIIDIGMSFPDGTMHGVDIIIPDFD
FT                   YVRKIKDKIRGIVITHAHEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKAER
FT                   KWFRPVEKRRVYEIGEFDIEWIHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGY
FT                   PTDLGRLAHYGEEGVLCLLSDSTNSYKEGYTKSESSVGPTFDQIFARTKGRVIMSTFSS
FT                   NIHRVYQAITYGLKYGRKVCVIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNE
FT                   VLIVTTGSQGETMSALYRMATDEHKFIKIKPTDQVIISAKAIPGNEASVSAVLDYLLKA
FT                   GAKVAYQEFSEIHVSGHASIEEQKLMLTLTKPKFFLPVHGEYNHITKHKETAMKCGIPE
FT                   RNIYLMSDGDQVELCQKYVKRIKTVKIGKVFVDNQINKQIADDVVIDRQKLADSGIVVI
FT                   IAQIDKATKTLINKPRVFSYGLVADKHDHAFSKDMAEVLGQFFINVKDEVLNDPRFLEN
FT                   QIRQVLRKHIFRKIKKYPTIVPTIFVM"
FT   gene            complement(21270..22070)
FT                   /locus_tag="C1336_000180029"
FT                   /note="C1336_000180029 identified by Glimmer3 with a raw
FT                   score of 6.98."
FT   CDS             complement(21270..22070)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180029"
FT                   /product="dimethyladenosine transferase"
FT                   /note="C1336_000180029 identified by Glimmer3 with a raw
FT                   score of 6.98. Gene function extrapolated from
FT                   JJD26997_2085 (CP000768.1) after blastn alignment (99.11
FT                   percent identity over a 783 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31105.1"
FT                   /translation="MVKAKKQYGQNFLIDKSVLAKIIQAIPKEMNNIIEIGPGLGDLTQ
FT                   ELLKISQVKAYEIDNDLIPILKKKFQKELECGKFNLIHQDASEAFNSSLDEKPYFLVAN
FT                   LPYYVASHIILRALEDKNCLGLIVMVQKEMAEKFCAKEGNSEFSSLGVLSAMICERKIL
FT                   FDVDPQCFNPPPKVISAVMSLIKTKDFDEFCEIENFKNFLKDCFKAPRKQLLGNLKTYK
FT                   VKVLEVLSILGLKENIRPHEICVNSYLKIYDKLKDEYGRKQRDK"
FT   gene            22151..22687
FT                   /locus_tag="C1336_000180030"
FT                   /note="C1336_000180030 identified by Glimmer3 with a raw
FT                   score of 14.93."
FT   CDS             22151..22687
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180030"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000180030 identified by Glimmer3 with a raw
FT                   score of 14.93. Gene function extrapolated from CJE1881
FT                   (CP000025.1) after blastn alignment (99.14 percent identity
FT                   over a 116 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31106.1"
FT                   /translation="MIVCAGGNENFSFAKAIGIGLVESAFHLGQLCLKEKPSKLIFIGT
FT                   CGLYDKGEILEIYRSSYAFNVEFSKISHAFYTPAKYEICLEKENVSRETIKINSSNYIC
FT                   QNSKAAKEFSKLGFFAENMEAFSILSVAKNLNIDAECILCATNFCNENAHEDFIKNHQK
FT                   AKEKLEEYLKKYYYI"
FT   gene            22710..23780
FT                   /locus_tag="C1336_000180031"
FT                   /note="C1336_000180031 identified by Glimmer3 with a raw
FT                   score of 12.81."
FT   CDS             22710..23780
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180031"
FT                   /product="radical SAM enzyme, Cfr family"
FT                   /note="C1336_000180031 identified by Glimmer3 with a raw
FT                   score of 12.81. Gene function extrapolated from CJE1882
FT                   (CP000025.1) after blastn alignment (97.11 percent identity
FT                   over a 1071 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31107.1"
FT                   /translation="MKELVNILDFLPEELGEKIKPMFRVKQIYQWIYQKYANNFSDMSS
FT                   LPKDLRLELAQNFHFSPVKCVKNEQSKDGSIKYLFELVDGLRIESVLLPMKEEKIDAEG
FT                   KRISHARYTICVSSQVGCKSGCSFCLTAKGGLKRNLSAGEIVGQILWIKKQNNIPYERR
FT                   VNIVYMGMGEPLDNLKNVSKAVKILSQNDGLAISPRRQTISTSGLAKQIKELGQMNLGV
FT                   LLAISLHAVNDELRTELMPINKAYNIAAIMDAVREFPIDQRKRVMFEYLLIDGINDKLE
FT                   HAKELVKLLNGIKAKVNLILFNPHEGSLYKRPSLENAIKFQDLLSNKGVTCTIRESKGL
FT                   DISAACGQLKERAKEQ"
FT   gene            complement(23889..23965)
FT                   /locus_tag="C1336_000180073"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(23889..23965)
FT                   /locus_tag="C1336_000180073"
FT                   /product="tRNA-Met"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            24102..24189
FT                   /locus_tag="C1336_000180070"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            24102..24189
FT                   /locus_tag="C1336_000180070"
FT                   /product="tRNA-Ser"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            24324..24518
FT                   /locus_tag="C1336_000180032"
FT                   /note="C1336_000180032 identified by Glimmer3 with a raw
FT                   score of 2.12."
FT   CDS             24324..24518
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180032"
FT                   /product="lipopolysaccharide core biosynthesis protein,
FT                   putative"
FT                   /note="C1336_000180032 identified by Glimmer3 with a raw
FT                   score of 2.12. Gene function extrapolated from CJE1884
FT                   (CP000025.1) after blastn alignment (97.96 percent identity
FT                   over a 98 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31108.1"
FT                   /translation="MNLKGIGISFIPRYFFQINLDKIFNDILKYNIKDLEEIQTRVKYY
FT                   NQINEFFTPTAKKNRKISF"
FT   gene            24644..25255
FT                   /locus_tag="C1336_000180033"
FT                   /note="C1336_000180033 identified by Glimmer3 with a raw
FT                   score of 8.02."
FT   CDS             24644..25255
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180033"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000180033 identified by Glimmer3 with a raw
FT                   score of 8.02. Gene function extrapolated from C8J_1620
FT                   (CP000814.1) after blastn alignment (98.92 percent identity
FT                   over a 372 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31109.1"
FT                   /translation="MENNINNILLKLDKNRHFCFLKDNINYENKKDIAIFRGAVYQKHR
FT                   KEFFDSYFGRTFCNIGDTSKQPSQWKKNFLNKKEQMKYKFIISLEGNDVASNLKWAMNS
FT                   NSLVLAPKITCETWFMEGTLKPNYHFALIDNENLSAVIEYFKSRPKDALEIINNAHQYI
FT                   KKFLDKKKEFHIGILVLTKYFYYSRQLELSKKRDILELIK"
FT   gene            25394..25469
FT                   /locus_tag="C1336_000180071"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            25394..25469
FT                   /locus_tag="C1336_000180071"
FT                   /product="tRNA-Ala"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            25473..25548
FT                   /locus_tag="C1336_000180072"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            25473..25548
FT                   /locus_tag="C1336_000180072"
FT                   /product="tRNA-Val"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            25576..26106
FT                   /locus_tag="C1336_000180034"
FT                   /note="C1336_000180034 identified by Glimmer3 with a raw
FT                   score of 14.18."
FT   CDS             25576..26106
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180034"
FT                   /product="acetyltransferase, GNAT family"
FT                   /note="C1336_000180034 identified by Glimmer3 with a raw
FT                   score of 14.18. Gene function extrapolated from
FT                   CJJ81176_0013 (CP000538.1) after blastn alignment (99.25
FT                   percent identity over a 531 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31110.1"
FT                   /translation="MQNTIIQKAVHKDLNSILEITKDALNAMKAMNFHQWDENYPNKIV
FT                   FQEDIQAQELYVFKENDEILGFICINEKFEPEFYKQVIFNKNYDDKAFYLHRLAVKQNA
FT                   KGKGVAQKLLNFCENFALENHKASLRADTHSKNFPMNSLFKKLDFNFCGNFDIPNYQDP
FT                   FLAYEKILNQKAF"
FT   gene            complement(26086..26472)
FT                   /locus_tag="C1336_000180035"
FT                   /note="C1336_000180035 identified by Glimmer3 with a raw
FT                   score of 15.36."
FT   CDS             complement(26086..26472)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180035"
FT                   /product="3-isopropylmalate dehydratase, small subunit"
FT                   /note="C1336_000180035 identified by Glimmer3 with a raw
FT                   score of 15.36. Gene function extrapolated from
FT                   JJD26997_2092 (CP000768.1) after blastn alignment (98.86
FT                   percent identity over a 88 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31111.1"
FT                   /translation="MVSFENFGSGSSREHAPWALVDYGIRAIIAPSFADIFKNNALGNG
FT                   LLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFSFDLDDFHKICLLEGLD
FT                   NIALTLKHEAQIKAYEKNSKSFLV"
FT   gene            26936..27565
FT                   /locus_tag="C1336_000180036"
FT                   /note="C1336_000180036 identified by Glimmer3 with a raw
FT                   score of 13.42."
FT   CDS             26936..27565
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180036"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000180036 identified by Glimmer3 with a raw
FT                   score of 13.42. Gene function extrapolated from CJE1890
FT                   (CP000025.1) after blastn alignment (95.95 percent identity
FT                   over a 247 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31112.1"
FT                   /translation="MLKELLEIKKEMEPVIHEANVKLNMLAREVIVRKKEYEIYGPMVD
FT                   RVYLDNAIYVKVMSSGRDVKTDNVAIKNGFYMVFVAPEKESTKDIKNKLKVAYEGLDNK
FT                   FIATLIRSCQRFKEIINKTQATLAKASKMNVVVKTNLGEASAALKFNINIEYTRDTQKL
FT                   TRENSKSAGSFRDTKTYINLIVEKNTDSQICEKLLDDVEKYFIGGG"
FT   gene            complement(27601..28245)
FT                   /locus_tag="C1336_000180037"
FT                   /note="C1336_000180037 identified by Glimmer3 with a raw
FT                   score of 12.12."
FT   CDS             complement(27601..28245)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180037"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000180037 identified by Glimmer3 with a raw
FT                   score of 12.12. Gene function extrapolated from
FT                   CJJ81176_0019 (CP000538.1) after blastn alignment (99.07
FT                   percent identity over a 645 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31113.1"
FT                   /translation="MNKKLLSIVASATLFSNLALADENSGFFIGADAAWMHAQVKSELK
FT                   HKNTKQNFNGDISGNIPSFGLKLGYRLNENHRIYAGYNYSDEFSDFIKTPRIQIEGDFT
FT                   THKFLTGYDFTPKLFEKTRAVLGVYGGYARTDLTLKTSFLSLSQNFDGYFYGAKIGALY
FT                   DLTPHNEIELGFKAEQIHYNSRNFYQNQVGSNFYDPKQTNYGVYLGYNYKF"
FT   gene            complement(28383..28766)
FT                   /locus_tag="C1336_000180038"
FT                   /note="C1336_000180038 identified by Glimmer3 with a raw
FT                   score of 14.30."
FT   CDS             complement(28383..28766)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180038"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000180038 identified by Glimmer3 with a raw
FT                   score of 14.30. Gene function extrapolated from C8J_1628
FT                   (CP000814.1) after blastn alignment (96.47 percent identity
FT                   over a 368 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31114.1"
FT                   /translation="MRYGEKEIKEFDVENMEIWPNDAKNDYIIKITLPEFMCTCPRSGY
FT                   PDFATIYLEYMPDKFVVELKAIKLYINTFMYRNVSHEASINEIYNTLKDKLKPKWIKVV
FT                   GDFNPRGNVHTVIECRSDIVVSK"
FT   gene            complement(29015..31561)
FT                   /locus_tag="C1336_000180039"
FT                   /note="C1336_000180039 identified by Glimmer3 with a raw
FT                   score of 13.82."
FT   CDS             complement(29015..31561)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180039"
FT                   /product="flagellar hook protein FlgE"
FT                   /note="C1336_000180039 identified by Glimmer3 with a raw
FT                   score of 13.82. Gene function extrapolated from
FT                   CJJ81176_0025 (CP000538.1) after blastn alignment (91.45
FT                   percent identity over a 550 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31115.1"
FT                   /translation="MMRSLWSGVSGLQAHQVAMDVEGNNISNVNTTGFKYSRADFGTMF
FT                   SQTVKIATTPTDGRGGQNPLQIGLGVSVSSTTRIHSQGSVQTTDKNTDVAINGDGFFMV
FT                   SDDGGLTNYLTRSGDFKLDAYGNFVNNAGYVVQGWNINWDDQTIDSSRTPQNIFIDPGM
FT                   HIPAAKSTEVAIKANLNSGLNIGTSSTNLYGLDSVHGYNTKTNKAEDENDTGTTQFYTT
FT                   SKNSVEVTEKGVDAGALFNAKGTGLNLRDGQGIWVSYADAKYTTNTGGQKVFDPNNTST
FT                   QNPVIFWGDKDNKVTLDITLNGVNIFNADIQSLDDAIAYINTFTAPTDTREGTGVKAVK
FT                   KSDGSGIEFVNDNADGTTDNMKNIDLTVNSNNSAGEIQNVTYNQGQKKFEVAQMNTAKT
FT                   NSAWISGDNNGKTGGENVKVITAHKYIYSSNPVDLPPMYNPDGGPSYVANNNQKPTDPA
FT                   SANYWDALHGGLLNTDARVFRTTEDLRELLQRDARYGVDYNGSGKGDGATVDMNDINQN
FT                   VKVVVNSSGHFAISNANEDSTIPSGAGVNNGNAQNVAAKNMSFNITAYSNKEGTVSTND
FT                   AFTAIFKAWDGPLVTGGSIKESEQLKLSSFSAGLEIYDSLGSKHTLEVQFVKQSTTQDG
FT                   GNEWQMIIRVPEPAEINTTGEGPTNIIVGSARFNNDGSLASYTPKTISFSPNNGAAPNQ
FT                   QIKLSFGTSGSNDGLVSSNSASTLTGQATDGYTSGNLKPDAIRVDDKGNILGEFTNGKT
FT                   FAVAKIAMASVANNSGLEEIGGNLFKVTANSGNIVVGEAGTGGRGEMKTSALEMSNVDL
FT                   SRSLTELIIIQRGYQANSKTISTSDQMLQTLIQLKQ"
FT   gene            complement(31764..32240)
FT                   /locus_tag="C1336_000180040"
FT                   /note="C1336_000180040 identified by Glimmer3 with a raw
FT                   score of 14.24."
FT   CDS             complement(31764..32240)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180040"
FT                   /product="crossover junction endodeoxyribonuclease RuvC"
FT                   /note="C1336_000180040 identified by Glimmer3 with a raw
FT                   score of 14.24. Gene function extrapolated from CJE1897
FT                   (CP000025.1) after blastn alignment (96.41 percent identity
FT                   over a 473 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31116.1"
FT                   /translation="MKILGIDPGSKNCGYAIIEASKGKNILIEAGLIKIKPSTLQYQIT
FT                   ELCEGLDLIFKNHSFDEVAIEDIFFAYNPKTVLKLAQFRGALSLKILQIHGDFAEYTPL
FT                   QVKKAVTGKAKATKEQVAFMVKRLLGLSKDIKPLDITDAIAVALTHAANLRVRV"
FT   gene            32341..33663
FT                   /locus_tag="C1336_000180041"
FT                   /note="C1336_000180041 identified by Glimmer3 with a raw
FT                   score of 13.36."
FT   CDS             32341..33663
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180041"
FT                   /product="chromosomal replication initiator protein"
FT                   /note="C1336_000180041 identified by Glimmer3 with a raw
FT                   score of 13.36. Gene function extrapolated from Cj0001
FT                   (AL111168.1) after blastn alignment (97.32 percent identity
FT                   over a 1230 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31117.1"
FT                   /translation="MNPSQILENLKKELSENEYENYLSNLKFNEKQSKADLLVFNAPNE
FT                   LMAKFIQTKYGKKIAHFYEVQSGNKAIINIQAQSTKQSNKSTKIDIAHIKAQSTILNPS
FT                   FTFESFVVGDSNKYAYGACKAVAHKDKLGKLYNPIFVYGPTGLGKTHLLQAVGNASLEM
FT                   GKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEEFFFI
FT                   FNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIRKKCEF
FT                   NDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMKDHIKEKK
FT                   ENITIDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRIVIYLARTLTALTMPQLANYFE
FT                   MKDHTAISHNVKKITEMIENDASLKAKIEELKNKILVKSQS"
FT   gene            33823..34890
FT                   /locus_tag="C1336_000180042"
FT                   /note="C1336_000180042 identified by Glimmer3 with a raw
FT                   score of 11.69."
FT   CDS             33823..34890
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180042"
FT                   /product="DNA polymerase III, beta subunit"
FT                   /note="C1336_000180042 identified by Glimmer3 with a raw
FT                   score of 11.69. Gene function extrapolated from CJE0002
FT                   (CP000025.1) after blastn alignment (98.80 percent identity
FT                   over a 582 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31118.1"
FT                   /translation="MKLSINKNTLESAVILCNAYVEKKDSSTITSHLFFHADEDKLLIR
FT                   ASDYEIGINYKIKKIRVESSGFATANAKSIADVIKSLNNEEVVLETIDNFLFIRQKSTK
FT                   YKLPMFNHEDFPNFPNTEGKNQFDIDSSDLSRSLKKILPSIDTNNPKYSLNGAFLDIKT
FT                   DKINFVGTDTKRLAIYTLEKANNQEFSFSIPKKAIMEMQKLFYEKIEIFYDQNMLIAKN
FT                   ENFEFFTKLINDKFPDYEKVIPKTFKQELSFSTEDFIDSLKKISVVTEKMKLHFNKDKI
FT                   IFEGISLDNMEAKTELEIQTGVSEEFNLTIKIKYLLDFLTSIEEEKFTLSVNEPNSAFI
FT                   VKSQGLSMIIMPMVL"
FT   gene            34920..37229
FT                   /locus_tag="C1336_000180043"
FT                   /note="C1336_000180043 identified by Glimmer3 with a raw
FT                   score of 15.63."
FT   CDS             34920..37229
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180043"
FT                   /product="DNA gyrase, B subunit"
FT                   /note="C1336_000180043 identified by Glimmer3 with a raw
FT                   score of 15.63. Gene function extrapolated from CJE0003
FT                   (CP000025.1) after blastn alignment (99.41 percent identity
FT                   over a 674 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31119.1"
FT                   /translation="MQENYGASNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDN
FT                   SIDEAMAGHCDTIDVEITTEGSCIVSDNGRGIPVDMHPTENMPTLTVVLTVLHAGGKFD
FT                   KDTYKVSGGLHGVGVSVVNALSKKLVATVERNGEIYRQEFSEGKVISEFGVIGKSKKTG
FT                   TTIEFWPDDQIFEVTEFDYEILAKRFRELAYLNPKITINFKDNRVGKHESFHFEGGISQ
FT                   FVTDLNKKEALTKAIFFSVDEEDMNVEVALLYNDTYSENLLSFVNNIKTPDGGTHEAGF
FT                   RMGLTRVISNYIEANASAREKDNKITGEDVREGLIAVVSVKVPEPQFEGQTKGKLGSTY
FT                   VRPIVSKASFEYLTKYFEENPIEAKAIMNKALMAARGREAAKKARELTRKKESLSVGTL
FT                   PGKLADCQSKDPSESEIYLVEGDSAGGSAKQGRERSFQAILPLRGKILNVEKARLDKIL
FT                   KSEQIQNMITAFGCGIGEDFDLSKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFMNELV
FT                   TNGHIYLAQPPLYLYKKAKKQIYLKDEKALSEYLIETGIEGLNYEGIGMNDLKDYLKIV
FT                   AAYRAILKDLEKRFNVISVIRYMIENSNLVKGNNEELFSVIKQFLETQGHNILNHYINE
FT                   NEIRAFVQTQNGLEELVINEELFTHPLYEEASYIFDKIKDRGLEFDKDILEVLEDVETN
FT                   AKKGATIQRYKGLGEMNPEQLWETTMDPSVRRLLKITIEDAQSANDTFNLFMGDEVEPR
FT                   RDYIQAHAKDVKHLDV"
FT   gene            complement(37255..37596)
FT                   /locus_tag="C1336_000180044"
FT                   /note="C1336_000180044 identified by Glimmer3 with a raw
FT                   score of 13.58."
FT   CDS             complement(37255..37596)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180044"
FT                   /product="monohem cytochrome C"
FT                   /note="C1336_000180044 identified by Glimmer3 with a raw
FT                   score of 13.58. Gene function extrapolated from Cj0004c
FT                   (AL111168.1) after blastn alignment (99.70 percent identity
FT                   over a 332 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31120.1"
FT                   /translation="MKKIILILALFLSASWAQNLEINPDTGLIIDPDSPLVEANCLACH
FT                   GSNLITNMHASRKAWLAAIRWMQDSEGLWEIEPEDEEKILNYLEKYYGEKYDTRRRIPL
FT                   AILLQNKTH"
FT   gene            complement(37599..38837)
FT                   /locus_tag="C1336_000180045"
FT                   /note="C1336_000180045 identified by Glimmer3 with a raw
FT                   score of 13.25."
FT   CDS             complement(37599..38837)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180045"
FT                   /product="molybdopterin oxidoreductase family protein"
FT                   /note="C1336_000180045 identified by Glimmer3 with a raw
FT                   score of 13.25. Gene function extrapolated from CJE0005
FT                   (CP000025.1) after blastn alignment (99.30 percent identity
FT                   over a 287 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31121.1"
FT                   /translation="MKQNDQKENRRDFLKNIGLGLFGISVLSNFSFENFLGSKALAKEL
FT                   PDFKIEGKKDLIYHGEKPLTAETEIYALDSDFTKPENFFVRNNGLPPSLETIKERLHKG
FT                   WTLEIDGESIINKKSYTIEDLKKKFKTYTYALTVECGGNGRSEVIPSTKGTQWGYGAVA
FT                   CGRWTGVRLKDILKDCGIKNDAVYIGYYGIDTKLNGEETSPISRGVPISKALQDETLIA
FT                   WAYEGKDIPLVNGYPLRLVCGGYPASTSGKWLYKISVRNKIHDGEKMEGSYKVPVNPVK
FT                   PGDFNYKGEMKIIESMPIRSVITNIKNGSEIKTNKKFEVRGKAWAGELEVSEVYISNDY
FT                   GVTWTKAKVEKPLNRLAWQKWSAQISIPTKGYYEIWARAIDSQGNSQPMVLAQWNPGGY
FT                   INNACHRVNVYGV"
FT   gene            39045..40346
FT                   /locus_tag="C1336_000180046"
FT                   /note="C1336_000180046 identified by Glimmer3 with a raw
FT                   score of 9.77."
FT   CDS             39045..40346
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180046"
FT                   /product="Na+/H+ antiporter family protein"
FT                   /note="C1336_000180046 identified by Glimmer3 with a raw
FT                   score of 9.77. Gene function extrapolated from
FT                   CJJ81176_0032 (CP000538.1) after blastn alignment (98.31
FT                   percent identity over a 1302 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31122.1"
FT                   /translation="MTLLTNPIIISVVLMTLLCLLRFNVLLSLLISALVAGVFSHLELV
FT                   DTMNILISGMKENLKTALSYILLGAIAAAISKTNLTAYLIKIVSHFISHKKYLLLLFIA
FT                   LISCFSQNLIPIHVAFIPLLIPPLLSLFNKLKIDRRAVACALTFGLTTPYMVLPVGFGL
FT                   TFQDLLKDNLNANNVSVSLNDVTNTMYFAAICMITGLFLALFVFYRKPREYQEVEIAKV
FT                   NLENLEMTRKEWGVLAGLVLTLILQILTMNLPLSGLLGFVLMVILGGVEFSKVNEVFDD
FT                   GLKMMGFIAFVILVAAGYGEVLKESGSVVELVNSVVPWMEQSKFLAVFFMLLIGLIITM
FT                   GIGTSFGTIPIIATLFCPICLELGFSTALIIFILGVAGALGDAGSPASETTMGTTVGLN
FT                   ADKQHDHIKDTCIPTFIFYNGSLLILGSIIAMFL"
FT   gene            40481..44971
FT                   /locus_tag="C1336_000180047"
FT                   /note="C1336_000180047 identified by Glimmer3 with a raw
FT                   score of 15.67."
FT   CDS             40481..44971
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180047"
FT                   /product="glutamate synthase, large subunit"
FT                   /note="C1336_000180047 identified by Glimmer3 with a raw
FT                   score of 15.67. Gene function extrapolated from C8J_0007
FT                   (CP000814.1) after blastn alignment (98.32 percent identity
FT                   over a 1308 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31123.1"
FT                   /translation="MDLENILENNQSIGLYHPKNEHDACGIAAIANIRGIASYKVICDA
FT                   LEILMNLEHRGGAGAEENSGDGAGILIQIPHDFFKTQELGFELPKKGDYAVAQMFLSPN
FT                   TDAKEEAKEIFLQGLKDKKLEFLGFREVPFNPSDIGASALKAMPYFLQAFVKKPSKISA
FT                   GLEFERVLYSTRRLIEKRAINVPKFYFSSFSSRTIVYKGMLLSTQLSDFYLDFKDVNMK
FT                   SAIALVHSRFSTNTFPSWERAHPNRYMVHNGEINTIRGNVDSIRAREGLMQSEYFENLD
FT                   EIFPIIAKSSSDSAMFDNTLEFLALNGRTLEEAFMMMVPEPWHKNENMESKKRAFYEYH
FT                   SLLMEPWDGPAAIVFTDGVIMGASLDRNGFRPSRYYLTKDDMLILSSETGALKLDEKNI
FT                   KAKKRLEPGKLLLVDTARGRVIADNEIKEHYANAKPYKKWLKNLVELEKQKSGVYKHQF
FT                   LKEDEVLKLQKAFGWSYDELKMSVAAMAQNGKEAIAAMGVDTPLAILSKTYQPLYNYFK
FT                   QLFAQVTNPPLDAIREEIVTSTRIYLGSEGNLLKPDENNAKRVKIALPVISNEELFEVK
FT                   ALNKFQVKEFSILYDYSKKTLEKALDELCVKIEDEVKKGVSIIILSDKGVDEKNAYIPA
FT                   LLAVSGVHNHLVRKNLRTHTSLIIESGEPREIHHFACLLGYGATVINPYLVYESIQKLI
FT                   VNKDLNLSYEKAVENFIKASSSGIVKIASKMGVSTLQSYNGSALFECLGLSSKVIDKYF
FT                   TSTTSRIEGMDLEDFEKELIALHKHAFNDTHKALDSKGIHGFRSAKEEHLIDPLVIFNL
FT                   QQACRNKDYKSFKKYSALVDEKQVNLRSLMEFDFSEAISIDKVESVESIVKRFRTGAMS
FT                   YGSISKEAHECLAQAMNKIGAKSNSGEGGEDEERYEIKEGVDKNSAIKQVASGRFGVDL
FT                   NYLSHAKEIQIKVAQGAKPGEGGQLMGFKVYPWIAKARHSTAGVTLISPPPHHDIYSIE
FT                   DLAQLIYDLKNANKDAKISVKLVSENGIGTVAAGVAKAGANLILVSGYDGGTGASPRTS
FT                   IPHAGIPWELGLAETHQTLILNKLRDRVRLETDGKLMNGRDLAIAALLGAEEFGFATAP
FT                   LIVLGCTMMRVCHLNTCPFGIATQDTELRDRFKGKVDDVVNFMYFIAEELREYMARLGF
FT                   ERLDDMIGRVDKLRQKSVQGKAGKLNLDKILKSLPTYNRTAVHFKDYKDNKLEKTIDYR
FT                   ILLPLCKNAVEKKEPIKLSLEVGNQSRTFATMLSSEILKTYGKDALDEDSIHIKAIGNA
FT                   GNSFGAFLLKGIKLEIIGDSNDYLGKGLSGGKIIAKISNEATFSPEENIIAGNACLYGA
FT                   TEGEVYLDGIAGERFCVRNSGALAVVLGTGVHGCEYMTGGQVVVLGDVGANFAAGMSGG
FT                   VVYIFGRHNEAHVNTELVDIKDLNAKDEKELKAVIEKHIAYTDSKKAKDILEKFDKKDF
FT                   FKVMPRDYEKMLKMLDLCKNEKDPNLAAFLKITQK"
FT   gene            44981..46711
FT                   /locus_tag="C1336_000180048"
FT                   /note="C1336_000180048 identified by Glimmer3 with a raw
FT                   score of 8.33."
FT   CDS             44981..46711
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180048"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000180048 identified by Glimmer3 with a raw
FT                   score of 8.33. Gene function extrapolated from Cj0008
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 80 bp alignment) - for clarity, the
FT                   original product name 'conserved hypothetical protein
FT                   Cj0008' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31124.1"
FT                   /translation="MAGFQSPITINEAMQRVKNNEYLLPAFQREYVWEPWQIEELFDSL
FT                   MRGYPISSMLFWKVKDESKTAWKFYRFLDYYREYYHTHNDYFNTSSHKDFDAILDGQQR
FT                   LTSLYLALFGNYDIHRLYNKWEDNDRYFKICHFYFNLTQSEKPKNENVEYEFLWLDRLE
FT                   TKEQNIYIDKHQQKWFRCKSIYNISDVNDIMEFAETNNLQKEERKRLSEFHTLIFNTKD
FT                   ESKINFYLEEEQDPDKAVNIFIRINSNGEPLDYSDILFSIAIANWNKIDARTEINNLVD
FT                   KINENFDISKDLILKGFLYLFHNNIKFQINSFDKNFIESIEAKWEGIKNAFIETFRLLR
FT                   SFGFEAKTLSSNNAILPILYFIYHKNLTNNIVDSVKCNENRAIIKKWLLRAIILKPFGG
FT                   SSDTVLSNMRKAFIKDFKQNSGFFDREIELFPLEEIEKEAKYIQTIDEEYLENNVIECR
FT                   KNSPEAFAVLSLLYPNLDYKNNNFHKDHLHPESAYKEYEKLYKATDNCISFNIYDSLPN
FT                   LQMLDANENESKNNKPLKQWVNEKCNGNRKEFLGKHLIPDVDLSLENFNNFIEERKKLL
FT                   "
FT   gene            46746..48191
FT                   /locus_tag="C1336_000180049"
FT                   /note="C1336_000180049 identified by Glimmer3 with a raw
FT                   score of 12.76."
FT   CDS             46746..48191
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180049"
FT                   /product="glutamate synthase, small subunit"
FT                   /note="C1336_000180049 identified by Glimmer3 with a raw
FT                   score of 12.76. Gene function extrapolated from
FT                   JJD26997_0009 (CP000768.1) after blastn alignment (96.71
FT                   percent identity over a 1366 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31125.1"
FT                   /translation="MGNARGFLDFKRVDFKKVAPKERVLNFKEFTTLLDKKEQEIQGGR
FT                   CMDCGVAFCHTGVMSEGKDVGCPLNNLIPEWNDLIYRSLWKEAYERLDLTNPFPEFTGR
FT                   VCPAPCEDSCVCAINGKSVSIKNNELAIIENAFKENLVRVNKPKQYNGKKIAIIGSGPA
FT                   GLACANTLNSLGYKVSVFERSDKIGGLLMYGIPDMKLDKSIVDRRVDLLKKSGIEFKVN
FT                   ENIDSKDKVSKLLKEFDALVLCTGASKPIDLDIEGRKLKGVEFALDFLTQNTKTLLKTG
FT                   KGADAAKGKNVLVIGSGDTSVDCIAVATRQGAKSIVRFERSPKRLLQRSQNNPWPLKAD
FT                   IFTTDYGLEEAIAIYGKDPREYQKMTKKFLGKTYVEGVEANDLKREFKEGKAINVEIPN
FT                   SKKTYKVDLVLLAMGFSGCEEAISKNFGVKLDEKNNISTENFQTTHKKIFACGDARKGQ
FT                   SLVVWAIKDGIECALSLHQNLAK"
FT   gene            complement(48192..48767)
FT                   /locus_tag="C1336_000180050"
FT                   /note="C1336_000180050 identified by Glimmer3 with a raw
FT                   score of 9.60."
FT   CDS             complement(48192..48767)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180050"
FT                   /product="ribonuclease HII"
FT                   /note="C1336_000180050 identified by Glimmer3 with a raw
FT                   score of 9.60. Gene function extrapolated from C8J_0009
FT                   (CP000814.1) after blastn alignment (98.61 percent identity
FT                   over a 576 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31126.1"
FT                   /translation="MKTLFDTKELLNEFDINLIGIDEAGRGALAGPMMMAACKLNKKLD
FT                   GLCDSKKLSEKKREELYEIIIKNSNYLILAFSSEQIDALGLSTCLKTGLKLIKKHFKTE
FT                   NNFLYDGNTNLGINGIKTQIKADTSILQVSAASILAKVSKDRVMNFLAKDFPYYEFEKN
FT                   KAYGTKAHKKLIAKFGICKLHRKSFKLL"
FT   gene            complement(48801..49040)
FT                   /locus_tag="C1336_000180051"
FT                   /note="C1336_000180051 identified by Glimmer3 with a raw
FT                   score of 14.31."
FT   CDS             complement(48801..49040)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180051"
FT                   /product="competence protein ComEA"
FT                   /note="C1336_000180051 identified by Glimmer3 with a raw
FT                   score of 14.31. Gene function extrapolated from CJE0010
FT                   (CP000025.1) after blastn alignment (99.45 percent identity
FT                   over a 181 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31127.1"
FT                   /translation="MKKLLFLFFALTAFLFGAVNINTATLKELKSLNSIGEAKAKAILE
FT                   YRKEANFTSIDDLKKVKGIGDKLFEKIKNDITVE"
FT   gene            complement(49105..49752)
FT                   /locus_tag="C1336_000180052"
FT                   /note="C1336_000180052 identified by Glimmer3 with a raw
FT                   score of 16.46."
FT   CDS             complement(49105..49752)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180052"
FT                   /product="non-hem iron protein"
FT                   /note="C1336_000180052 identified by Glimmer3 with a raw
FT                   score of 16.46. Gene function extrapolated from Cj0012c
FT                   (AL111168.1) after blastn alignment (96.91 percent identity
FT                   over a 648 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31128.1"
FT                   /translation="MRQYETYKCQKCGNEVEVQNVGGGKLSCCGKEMKCITTDLTAVNL
FT                   MKAFAGESMARNKYDLFADVAEEEGWHAVARHFREAAENEKWHARAEFKAYHEIVDGKP
FT                   LEVTTKNLVSAAEGENYEHTTMYPNFAKIAEDEGKKAIARLFTAIGKVEIEHEREYLAL
FT                   KKMLEEEEFFNSEVEELWVCEVCGHIHRGKKAPAACPLCKAPKEYFKREFLG"
FT   gene            49911..51587
FT                   /locus_tag="C1336_000180053"
FT                   /note="C1336_000180053 identified by Glimmer3 with a raw
FT                   score of 17.20."
FT   CDS             49911..51587
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180053"
FT                   /product="dihydroxy-acid dehydratase"
FT                   /note="C1336_000180053 identified by Glimmer3 with a raw
FT                   score of 17.20. Gene function extrapolated from C8J_0012
FT                   (CP000814.1) after blastn alignment (98.21 percent identity
FT                   over a 1677 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31129.1"
FT                   /translation="MRSDAIKKGHLKAPNRSLLRACGLKDEDFDKPFIGVANSYIDIIP
FT                   GHYFLNDYAKIIKDEIRKNGCVPFEFNTIGVDDGIAMGHEGMLYSLPSREIIANSIETV
FT                   MNAHQLDALICIPNCDKITPGMLMGALRVNVPTIFVSGGPMASGVTKKGEKISLSSVFE
FT                   AVGAYEAKKISEEEFKDIECSACPSGGSCSGMFTANSMNTLCEAMGIALEGNGTILALS
FT                   KEREELLRKAARRICEIALDERFKIRNIITQKAVRNAMVVDMAMGGSSNTVLHMLAISR
FT                   EAGVALDIKDLNFISSKVAHIAKIAPSLNSVYMDDIHKAGGVSAVMAEISSRQGHILEL
FT                   DALTITGESLKERLKNAKIKDENIIRRVDNAYSKVGGLAILFGNLAEQGCVIKTAGIIG
FT                   ERKFKGKAVCFNSQDEAIKGIIKGKVQKGNVCVIRYEGPKGGPGMQEMLSPTSLLMGMG
FT                   LGADVALITDGRFSGATRGLSVGHISPEAAEGGLIGLLKDGDEIEIDVDAYTIHANLSE
FT                   EEIAKRKKEFVLPQKEVPSRWLRMYQKLVSNASKGAVLDME"
FT   gene            complement(51599..52123)
FT                   /locus_tag="C1336_000180054"
FT                   /note="C1336_000180054 identified by Glimmer3 with a raw
FT                   score of 10.72."
FT   CDS             complement(51599..52123)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180054"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000180054 identified by Glimmer3 with a raw
FT                   score of 10.72. Gene function extrapolated from
FT                   CJJ81176_0041 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 197 bp alignment) - for clarity,
FT                   the original product name 'membrane protein, putative,
FT                   degenerate' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31130.1"
FT                   /translation="MKKYFQKRYTLAFFIGILAGIFGAIVKWGWEVPFPPRNPNVFWPA
FT                   DALERVTPPKIFLEQLGLPTDWTYMFSGMQMPLSIFIVHVGFSIVFGVAYCMIAEKWHR
FT                   ITMWQGAVFGFFVYLFAHVIVMPLIAEVPPLSEIPFDEHLSEIFGHIVWLWGMEIVRRD
FT                   IRNRITKEIEE"
FT   gene            complement(52215..53441)
FT                   /locus_tag="C1336_000180055"
FT                   /note="C1336_000180055 identified by Glimmer3 with a raw
FT                   score of 15.94."
FT   CDS             complement(52215..53441)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180055"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000180055 identified by Glimmer3 with a raw
FT                   score of 15.94. Gene function extrapolated from C8J_0014
FT                   (CP000814.1) after blastn alignment (98.36 percent identity
FT                   over a 670 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31131.1"
FT                   /translation="MINIKLIEHIFKAASISRWNDYPRMANLVELDKQAHKFIIAYFIA
FT                   KMEKDVDMRVIIEGGIFEFLSRVVVTDIRPDVYHKIVRQKKAEVNAWVLSKIEPMIEDI
FT                   EEGEFLKRFEAYLNGNAYTKERLILKAASYFATRWEFNIVYQTSAFLNDIDEIKNKVEE
FT                   ELEDYYELIGARKIALNQKIAKIIDLSGRLRFQKRWAQTPRIPETAVLGHMLVVAILGY
FT                   FYSLKIKACDKRLENNFYCALFHDLPESLTRDIISPVKYGIDGLHDIINDYEMKLINER
FT                   ILPFVPEGLRAEFSYILGIREGRNDESNFVKNEFENRTYKNAKIELCSGSLSSFNENEF
FT                   GAIDGKALKYCDKIAAYIEAGLSISYGVKSKELESGFLGMYEFFKENPTIDGVNFFEIC
FT                   ESLREYFKI"
FT   gene            53518..54192
FT                   /locus_tag="C1336_000180056"
FT                   /note="C1336_000180056 identified by Glimmer3 with a raw
FT                   score of 13.83."
FT   CDS             53518..54192
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180056"
FT                   /product="putative transcriptional regulatory protein"
FT                   /note="C1336_000180056 identified by Glimmer3 with a raw
FT                   score of 13.83. Gene function extrapolated from C8J_0015
FT                   (CP000814.1) after blastn alignment (98.67 percent identity
FT                   over a 675 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31132.1"
FT                   /translation="MSKKALCIISGGMDSTLCAYLAKKEGYEIIALHFDYEQRTQEKER
FT                   ECFKQICKALKVEKSYILDVSFIKDIGGNALTDKSIDIPKNELCISDTPPITYVPFRNG
FT                   IFLSIAGSLAEKENCESIFIGVVEEDGSGYPDCTDEFIQKAQEFINEGTSKNFKVCIKT
FT                   PLVRLNKAKIVELALKENVPLELTWSCYESKDEACGECDSCLLRLRGFEKAGFKDKIKY
FT                   KS"
FT   gene            complement(54213..55739)
FT                   /locus_tag="C1336_000180057"
FT                   /note="C1336_000180057 identified by Glimmer3 with a raw
FT                   score of 13.59."
FT   CDS             complement(54213..55739)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180057"
FT                   /product="putative ATP/GTP binding protein"
FT                   /note="C1336_000180057 identified by Glimmer3 with a raw
FT                   score of 13.59. Gene function extrapolated from C8J_0016
FT                   (CP000814.1) after blastn alignment (97.67 percent identity
FT                   over a 1032 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31133.1"
FT                   /translation="MNEINKTKNFYTLMCLAGFLIILLPVGIANFVFGYMLGDSPCTLC
FT                   WGQREAMIFIGVMALFIVRYGMKGKYLAALLIMTAVGLYQSFAHYGNHAHRDLDQGFGL
FT                   AVFGIHTYFWAEVVFWAVVLLLGVIFAFAPKFNAFEAELNGEKFRKYTKFSLAAVVISA
FT                   IVVASNVFQAFVSTGIPPYVGQGDPVRFSLNPKYIIWSKEGWNGLWQNISFLGKRDVKA
FT                   PDYAFAPASEKLGIKFDNDINNAPFAKINDELKITNEQTINFDKAINTLDYINNEFVAS
FT                   SKWDVAFLDNNFSVKEGFELDPYFSATIDPIIGIIPYMNDKFILMGSNKSFLRFAKNPN
FT                   ASEEDIAKQYADFVKGNDKFKGQGEGLGRGRLDTVRAKFNHVASMTTDGNYLYLATVPN
FT                   NKDAKTFVISKISLKDRVLSGEFTPKANLKEGKTLGDLYVTSMTFKDGEIYALSKNHNV
FT                   IAVIDPVKEEVVKTIAFPSSITNARSIFFKDGKINILSYQDGANKLYTLN"
FT   gene            complement(55751..55918)
FT                   /locus_tag="C1336_000180058"
FT                   /note="C1336_000180058 identified by Glimmer3 with a raw
FT                   score of 5.30."
FT   CDS             complement(55751..55918)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180058"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000180058 identified by Glimmer3 with a raw
FT                   score of 5.30. Gene function extrapolated from C8J_0017
FT                   (CP000814.1) after blastn alignment (98.97 percent identity
FT                   over a 97 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31134.1"
FT                   /translation="MEFLELLLVLIALILIIKKPEKENLAFGLVMVAWLLMVFFYVGHK
FT                   TGALLTIMNL"
FT   gene            complement(56025..57803)
FT                   /locus_tag="C1336_000180059"
FT                   /note="C1336_000180059 identified by Glimmer3 with a raw
FT                   score of 9.41."
FT   CDS             complement(56025..57803)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180059"
FT                   /product="MCP-domain signal transduction protein"
FT                   /note="C1336_000180059 identified by Glimmer3 with a raw
FT                   score of 9.41. Gene function extrapolated from C8J_0018
FT                   (CP000814.1) after blastn alignment (96.88 percent identity
FT                   over a 448 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31135.1"
FT                   /translation="MTNKKSSFLIKFIILSTLVLAFILVLLGIIFNNYSSSKDNKDLIN
FT                   IVQQLQISDEKINSVFQNSFNFINYDPSVQAIKKMQENFKKLKTFGIDISKAEEIFNAK
FT                   LIQLNYFKSANSIAVNSKLYLFELAKNYFEELEQNHETNKNNYRTMSSMLSVLSTESIL
FT                   QKTTLNQLNSLMKEIKNDTKSENLQLFLKHYKMIVKQISIMQDNSSIYENNSLMKELKQ
FT                   LNAFTQNAVEQSNLFKFYIALTVFGITLVLFVFFILLTLKKVIMPIHTLEKLSANLASK
FT                   EANLHSRLNIDPKSELGQSAQYINSFISTVQNSIIEAIENAKSSHQNSQKLKNNSMMLE
FT                   NSSNSQHEQIQGVKEITYVLDDHINLAGNLAQESIENMQDMHILMDKVELTLSELVNLI
FT                   NENNEKEQNIVANMDNLTQSADNIIEITSSIRDIADQTNLLALNAAIEAARAGEHGRGF
FT                   AVVADEVGQLADKTSKSLLNINATVNAIVQQINDNKALMDLIHDSMKETSLKTNDLQQE
FT                   LVNSMHKLESSIESTQTMKDKSMEVKDKMLILGTSIDKVNELANSVKDLSSEINNISQN
FT                   VLNGASKLSEKLSSFQ"
FT   gene            complement(57793..58707)
FT                   /locus_tag="C1336_000180060"
FT                   /note="C1336_000180060 identified by Glimmer3 with a raw
FT                   score of 13.04."
FT   CDS             complement(57793..58707)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180060"
FT                   /product="cytochrome c551 peroxidase"
FT                   /note="C1336_000180060 identified by Glimmer3 with a raw
FT                   score of 13.04. Gene function extrapolated from CJE0020
FT                   (CP000025.1) after blastn alignment (95.47 percent identity
FT                   over a 905 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31136.1"
FT                   /translation="MKKIIIILCLSYANIVFAVDMITPIPNSIPYDKEKAKLGKSLYMD
FT                   KSLSKDGKVSCNTCHRLDQHGVDGLEFSIGVDNQLDKPFNTPTTFNSVFNFVQFWNGKA
FT                   KDLAEQAKVPFFNPKEMGLSPELLLQKVNSNEDYVKTFKKLYGEVTVENIALAVAEFEK
FT                   TLITPNSPFDRYLSGDQNAISAQAKKGYEDFKANGCISCHQGQNIGGNMFQKIGIFEEY
FT                   PNQEDLGRYEITKREADKMIFKVPSLRNIAKTAPYFHDGSIPTLDACVQFMAYYQLGKF
FT                   LDQKTVDNIVAFLESLTGEYHDK"
FT   gene            complement(58795..59667)
FT                   /locus_tag="C1336_000180061"
FT                   /note="C1336_000180061 identified by Glimmer3 with a raw
FT                   score of 11.78."
FT   CDS             complement(58795..59667)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180061"
FT                   /product="fumarylacetoacetate hydrolase family protein"
FT                   /note="C1336_000180061 identified by Glimmer3 with a raw
FT                   score of 11.78. Gene function extrapolated from C8J_0020
FT                   (CP000814.1) after blastn alignment (98.49 percent identity
FT                   over a 860 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31137.1"
FT                   /translation="MKFVNFIQDQKPNLGVLNSSGKIVSFADLGIETNDMNEFIIYFDK
FT                   FKHKLTDLDSKIAYEIPKEDYLAPIIEPRQDIICLGINFLDHAKESAKFKGEKFEEREY
FT                   PVYFGKRCNQATPPFGDIPLHADVTSQLDYECELAFILSKDAYKIKAKDAKNYIFGYTI
FT                   INEISARELQKRHKQFYRAKSLEGSTIMGPYITSVDEISYPPKLQLQSYVNDELRQNSN
FT                   TQLFIFDIAYVLEELSAGMLLKAGSIISMGTPSGVGMGLNPPTFLKSGDKVRCVIENLG
FT                   ELCNKIKKL"
FT   gene            complement(59779..60681)
FT                   /locus_tag="C1336_000180062"
FT                   /note="C1336_000180062 identified by Glimmer3 with a raw
FT                   score of 12.60."
FT   CDS             complement(59779..60681)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180062"
FT                   /product="RNA pseudouridine synthase family protein"
FT                   /note="C1336_000180062 identified by Glimmer3 with a raw
FT                   score of 12.60. Gene function extrapolated from
FT                   CJJ81176_0049 (CP000538.1) after blastn alignment (99.04
FT                   percent identity over a 313 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31138.1"
FT                   /translation="MAYIKIKLSNNGKKAFQVLMENLKISINEAQKLIDKKRLFCDGIL
FT                   VEEKNKILNGLVELIVYKNNPKGVEIVFENEDFAILEKESGILSHPNGRHCKYSLSDEI
FT                   WHLWGKEACVAHRLDKETSGLILIAKNKKAQIDLKSLFEKKLVQKEYLALAHGKIEENF
FT                   IVDKAINLTKNYDDVKTRMQICKEGKQAITEFEILEYFPKINATLLLCKPLTGRQHQIR
FT                   VHLHYKNHTILGDPLYGLSKEQIESILDEKLNPKERLKLTGALRLCLHSYRLKFQYKNQ
FT                   NFDINSKINIKEIFNNSIK"
FT   gene            60758..62086
FT                   /locus_tag="C1336_000180063"
FT                   /note="C1336_000180063 identified by Glimmer3 with a raw
FT                   score of 14.42."
FT   CDS             60758..62086
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180063"
FT                   /product="adenylosuccinate lyase"
FT                   /note="C1336_000180063 identified by Glimmer3 with a raw
FT                   score of 14.42. Gene function extrapolated from C8J_0022
FT                   (CP000814.1) after blastn alignment (99.26 percent identity
FT                   over a 135 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31139.1"
FT                   /translation="MVERYSREIMAKKWDMQAKYDAWLKVELAAVKAWNKLGLIDDTDC
FT                   EKILKNAKFDIARIDEIEKTTRHDVIAFLTSVSESLGEESRFVHYAMTSSDCIDTAVAL
FT                   QIKESLELILEDVSLLLEVIKKRALEHKNTLMVGRSHGIHGEPITFGLVLAIWYDEILH
FT                   AKELLEHAKEVISYGKISGAMGNFAHAPLEFEEEVCKNLGLKAAPVSNQVIQRDRYAQV
FT                   ISAIAILASSCEQIAVAIRHFQRTEVYEAEEYFSVGQKGSSAMPHKRNPVLSENITGLC
FT                   RVLRSFVTPALENVALWHERDISHSSVERFILPDAFITADFMLMRLTNMIDKLLVYPEN
FT                   MMKNLNLTGGLVFSGRVLLELPFKGISREEAYKIVQRNAMKVWADLQNGKAAINEKNES
FT                   LFLLALLEDEDLRKSLSEEDVRKCFDYNYYIKNVDAIFKRTFK"
FT   gene            62102..64471
FT                   /locus_tag="C1336_000180064"
FT                   /note="C1336_000180064 identified by Glimmer3 with a raw
FT                   score of 14.12."
FT   CDS             62102..64471
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180064"
FT                   /product="ribonucleoside-diphosphate reductase, alpha
FT                   subunit"
FT                   /note="C1336_000180064 identified by Glimmer3 with a raw
FT                   score of 14.12. Gene function extrapolated from CJE0024
FT                   (CP000025.1) after blastn alignment (98.19 percent identity
FT                   over a 2370 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31140.1"
FT                   /translation="MKVIKRNGRTEELDISKIKKCTSDAVKDLEGVNLSELELDAKIQF
FT                   RDGISTEEIQKTLIKTAVDKIDIDCPNWTFVAARLFLFDLYKKVNGMNRYNHLREYFEK
FT                   GEKEGRILLGLKEKYDLDDLNAYIKPERDMQFTYLGIKTLYDRYLIKDSKGMPIELPQQ
FT                   MFMAIAMFLAQNEFNPQEWAKKFYDLISKFELMLATPTLSNARTTRHQLSSCYIGSTPD
FT                   NIEGIFDSYQEMALLSKFGGGIGWDWSKVRAMGGSIDGHKNAAGGIIPFLKITNDIAVA
FT                   VDQLGTRKGAIAVYIEPWHMDISDFIDLRKNSGEERRRAHELFPALWINDLFMKRVRAN
FT                   DKWTLFDPADTADLCDLYGEAFEKRYEEYEKDESITKEIVEAKELWKKILLNYFETGLP
FT                   FLCFKDSANRANPNAHVGIIRSSNLCTEIFQNTEPNYYQIKVVFENGDELHFDEEQKVV
FT                   IDGGYEKPAKKISTLDSIDGNKVYIVEKYKNDGKTAVCNLASINLSKVYTKEDIERVVP
FT                   TAIRMLDNVIDLNFYPHRKVKDTNLKSRAIGLGVMGEAQMLAEAKIHWGSDEHLNKIDE
FT                   IMEQISFEAINASSNLALEKGSYEDFEGSNWSKGIFPIDVASPKAKALTLREGLFDQSE
FT                   CDWVKLREKVKKDGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKWFEQNLSGMIPVV
FT                   VPNLSLDTWQYYTPAYELDQKILVKAAAVRGKWIDQGQSLNIFLSLDKASGGYLNEIYQ
FT                   LAWELGVKSTYYLRSESPDSEKVNVADRSIECEGCQ"
FT   gene            complement(64510..65865)
FT                   /locus_tag="C1336_000180065"
FT                   /note="C1336_000180065 identified by Glimmer3 with a raw
FT                   score of 6.36."
FT   CDS             complement(64510..65865)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180065"
FT                   /product="putative transmembrane symporter"
FT                   /note="C1336_000180065 identified by Glimmer3 with a raw
FT                   score of 6.36. Gene function extrapolated from C8J_0024
FT                   (CP000814.1) after blastn alignment (98.91 percent identity
FT                   over a 552 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31141.1"
FT                   /translation="MISQAHTITTLAMLCVVFYALKKMRDIKINFSLRMLFALLMGLGF
FT                   GFALQYLANFPDAKEASNILWYSETKHWFAFVSSVFVAFIKMLVVPLVSICIIKVIIEI
FT                   DKNIKISSLLGISLFWILFSTAIAATLGIFLGYSFDLGSNFAIHEGDKQIREIQTFSNI
FT                   ILGLIPSNIITAINKENIIAIVIFSFFIGISAKKISKKEEYEQAFKSFHNFILTFYNIM
FT                   MNMTATVIRFMPYAVVCMMANVLLSNGFEAIKTAGLFIMLIYIAMFIMFGVHFLLLASQ
FT                   GLNPIKYAKKAFPVWLFAFSSRSSLGTLPMTTSTLQNKFGVNSAIANFVASIGTTTGLN
FT                   GCAGYFPALAAVFVAFATHTHIDFTFALMIVLVAVIGSLGIAGVPGSATMAASIMLAGI
FT                   GFGNNFVMLSLILAIDPIIDMARTASNVSGAMTSALCTAKNLKALDKEIYNS"
FT   gene            complement(66015..66638)
FT                   /locus_tag="C1336_000180066"
FT                   /note="C1336_000180066 identified by Glimmer3 with a raw
FT                   score of 12.40."
FT   CDS             complement(66015..66638)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180066"
FT                   /product="thymidylate synthase"
FT                   /note="C1336_000180066 identified by Glimmer3 with a raw
FT                   score of 12.40. Gene function extrapolated from Cj0026c
FT                   (AL111168.1) after blastn alignment (99.36 percent identity
FT                   over a 624 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31142.1"
FT                   /translation="MQITLLFHTPLSVCSHATRTCWQSFEKGDCGGEKDKELIDRVGNK
FT                   FKHASTLEHLNYTFYIQGISRACLQEVARHRHTSPSVKSTRYTLKELRNEAEFKIGDFE
FT                   NASRYLVLCGNEEVDNASIKALENLRTILQKSISLDIAKYCLPESYKTELTLTINARSL
FT                   QNFISLRSSKSALWEIRNLANALFEALPQEHKFIFEHCLHKDIE"
FT   gene            66758..68389
FT                   /locus_tag="C1336_000180067"
FT                   /note="C1336_000180067 identified by Glimmer3 with a raw
FT                   score of 16.64."
FT   CDS             66758..68389
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180067"
FT                   /product="CTP synthase"
FT                   /note="C1336_000180067 identified by Glimmer3 with a raw
FT                   score of 16.64. Gene function extrapolated from
FT                   CJJ81176_0054 (CP000538.1) after blastn alignment (98.41
FT                   percent identity over a 1632 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31143.1"
FT                   /translation="MKQTKYIFVTGGVLSSLGKGIAAASIATLLKNSGLKVSILKADPY
FT                   INVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFLDESLSQDNNFTTGRVYQSVIEKE
FT                   RRGEYLGKTIQVIPHIVGEIKDRIKKAGEGKDILIVEIGGTVGDIEGLPFLEAIRALRL
FT                   EVGKNNAMNIHLTLVPFIKAAGELKTKPTQHSVGELRRIGISPDMIICRSEKALDRDLK
FT                   DKIAISCGVEKNCVIESVDAASIYQIPLNFLKQDILSPIAEILDLKNLKPNMENWDSLV
FT                   KRVIAPSNEVKIAFVGKYVDLKESYKSLTEAIIHAGAALDTKVELKWVDSEKLENMESA
FT                   EVFKDVSGILVAGGFGYRGVEGKIKAIQYARENKIPFLGICLGMQLALVEFARNVLKLK
FT                   DANSSEFDEKCQNPVVYLIDEFMDTNGEKQIRTAKTPLGGTMRLGAYKCDIKEKSLLAK
FT                   VYNEAKSVKERHRHRYEANPKYRADFEKHGLIVSGESKGLIEAVELNCHPFFLAVQFHP
FT                   EFTSRLEHVNPVICGFIKAAINYEDN"
FT   gene            68376..69947
FT                   /locus_tag="C1336_000180068"
FT                   /note="C1336_000180068 identified by Glimmer3 with a raw
FT                   score of 12.80."
FT   CDS             68376..69947
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180068"
FT                   /product="single-stranded-DNA-specific exonuclease RecJ"
FT                   /note="C1336_000180068 identified by Glimmer3 with a raw
FT                   score of 12.80. Gene function extrapolated from
FT                   CJJ81176_0055 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 164 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31144.1"
FT                   /translation="MKIINKNEIKKILASRFEKDLHTKLCDLPLPCCLKDAYKAANRIK
FT                   EAVEKNEKVAIVGDYDVDGIISCVIMAEFFDDIGFDYIVRIPNRFKDGYGLNAEIINEL
FT                   DVNLIITVDNGIAALEAAKLCKEKNIDLIITDHHMPQDVLPDAFAIINPKQKDCDFPEI
FT                   EICGAQVAWYLIAALKEVCKLKYDMCKFLELLAIAIIADMMELRDLNRALVRRGIDHIN
FT                   KSKRAAFRAIKHYYQKDKFALDNIGFLIAPLINSAGRMDDASISYEFLHTKDFNKALEY
FT                   LEQIVSFNESRKDEEKQLFEDSLNQIDENDSCIVVSGLNWHEGVLGIVASRLAKHFNKP
FT                   AFVFSQNKEHLKGSARSVGKIDILALISKTNSILSNYGGHKGAAGISLNSENFEQFKNK
FT                   IKKECSQISESEFLDTDEILGILEPSEIDFEMLEILESFEPFGHKNPRPFFVLENLCVK
FT                   NKKLLGKDEKHLKLILTKENKTIEALFFNFDKEPELNQNISLLGSISKNEFRGLVTPQF
FT                   VIKEIL"
FT   gene            70084..71079
FT                   /locus_tag="C1336_000180069"
FT                   /note="C1336_000180069 identified by Glimmer3 with a raw
FT                   score of 16.06."
FT   CDS             70084..71079
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000180069"
FT                   /product="L-asparaginase"
FT                   /note="C1336_000180069 identified by Glimmer3 with a raw
FT                   score of 16.06. Gene function extrapolated from
FT                   CJJ81176_0056 (CP000538.1) after blastn alignment (98.19
FT                   percent identity over a 996 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31145.1"
FT                   /translation="MAEAKPKIAILATGGTIAGSIDSAVATTGYTAGVVGVDVLIKAVP
FT                   QIQDLANISGEQIANIDSSNMRDEIWLKLAKEINKLFAEGVDGVVITHGTDTMEETAYF
FT                   LNLTIKSDKPVVLVGAMRPSTAISADGPKNLYNAVALAADKESKGKGVMVAMNDKILSA
FT                   RGVVKTHSLNVDAFSSPDFGDLGYIVDGKVFFYNNVTKAHAKNAPFDVSKLTSLPKVDI
FT                   LYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGSIHEDQKNVLKELIKKGLDVVVSSRVV
FT                   AGRVAVSDSDEKLGFISAEDLNPQKARVLLMLALTKTSDPKKIQEYFLKY"
FT   gap             71260..71359
FT                   /estimated_length=unknown
FT   gene            71608..73578
FT                   /locus_tag="C1336_000020000"
FT                   /note="C1336_000020000 identified by Glimmer3 with a raw
FT                   score of 12.27."
FT   CDS             71608..73578
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020000 identified by Glimmer3 with a raw
FT                   score of 12.27. Gene function extrapolated from
FT                   CJJ81176_0063 (CP000538.1) after blastn alignment (99.95
FT                   percent identity over a 1971 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31708.1"
FT                   /translation="MKKLISKGKVLTLLLGVGFALNVSSAENSNVLIQGEAAQDGDTKP
FT                   RTLEGYVHQEDAFFKYLKEHHPMFKYEKEGRIVGKYAISDREEEYVEFSNGPTFAQQNN
FT                   LAHTSVTYRLGMESFLDFPNKFVGPKKCGECHPAQYKAWERSRHAKTVRFPDEFEEVGN
FT                   DLKKPMYNSQSTILPDGIYPDDVYAVIGTPRTKYGFIDRWLVRGTYHVEDGNLSNMTGK
FT                   IVAGGNQFSRLWSEFLTPEMTKKIAEFSPGFPTTMEQFGGNGSQVWGTNSYAAQYRKNM
FT                   LFQPASSYCETCHSFKFDFKSKEEFYKALGNTQELRKHTISKGISCEECHGAGAHLYGA
FT                   RGAGMPSNCERCHQRFSYNEEDAKKNPRKPFNAFFKSSCPACGTEGAQMYSSAHYDKGM
FT                   RCSTCHDPHEVTFNDWKDGYTKVGLKKTCTDCHDTQASFFKQGGIHSKDNCTACHMPNM
FT                   MSCENFGAVQNPDKGGFDNVRASHIWKIKVDKTAKTLNPPEGKERSPKTPGWTIARDDD
FT                   GRFFLDLMWACGRTSFSDPNLMGSGASGCHSAVQSNLPKKLHFTDQETIYDIVVGWQKP
FT                   VKDGYENILKGVKEIDKAMAENPKLSVEKKSRVITLANQARAIAEKLQKDGSWGVHGPV
FT                   YSKKIVDEALVYIQEAKNILK"
FT   gene            73619..75688
FT                   /locus_tag="C1336_000020001"
FT                   /note="C1336_000020001 identified by Glimmer3 with a raw
FT                   score of 11.00."
FT   CDS             73619..75688
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020001"
FT                   /product="putative membrane protein"
FT                   /note="C1336_000020001 identified by Glimmer3 with a raw
FT                   score of 11.00. Gene function extrapolated from C8J_0030
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 339 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31709.1"
FT                   /translation="MKQSLIKFILLAVFCFSTPFLLADGKIQIGIVEGVTPISMKDAEK
FT                   LLGQKNVYFVDVNSKEEREVAGNIPNAVLVDAQNWQNLLPDDFNATLIFYGSNRFTFDA
FT                   SNIANLSQKLGYTHVYVMLDGIESWVLSGRKVQKEQIEKWQNAKNLDDFKDSIHSRMYF
FT                   GDVPSCRDCHGKGEDKKSIRYNNAANLDLINKNCASCHKDIDKEFKHSIHQNISQIQLD
FT                   KDGKKKKIPTCTTCHDIHNNDPLMNAMTLKQRSDFKCGECHQDKQDRYHDTFHGKAMVL
FT                   NSPGSAPKIAACYDCHGKHNILKVEDLNSTLSSLNRVQTCAQCHPNSNENFANFIAHAD
FT                   HSDGENYPLLHGAYIFMTALVIGVFVFFGLHTLLWSIRLILARFSHPAEWKKAKENAHN
FT                   DKVLIKRFSTFHKIQHFFMAASFLGLAFSGLPQKFYTAPWAQTMIDLIGGPIGATIVHH
FT                   ISAIVMFIVFFSHIGEIILVNWKRRDLVRDPQTGKLDKMKILKALFGPDSLMPNWQDFK
FT                   DMKAHFKWFFGMGERPQFDRWTYWEKFDYLAVFWGMFVIGLSGLVLWFPTFFSTFLPGW
FT                   MINLCSLVHSDEALLATGFIFAIHFFNTHFRADRFPMDMVIFSGTQSEAEIKQERNAYY
FT                   QRLKESGKLESLYEKNSKFNSYKGIAKLAGYLMLITGMIFLFLMIYAFIVDLLK"
FT   gene            75732..76316
FT                   /locus_tag="C1336_000020002"
FT                   /note="C1336_000020002 identified by Glimmer3 with a raw
FT                   score of 11.27."
FT   CDS             75732..76316
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020002 identified by Glimmer3 with a raw
FT                   score of 11.27. Gene function extrapolated from C8J_0031
FT                   (CP000814.1) after blastn alignment (98.94 percent identity
FT                   over a 282 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31710.1"
FT                   /translation="MLKKLILGFIILLFCACNDEKIDENILSKGTKTTEQYKQDTNNLD
FT                   LNSYKEIAEFFKDNQNIVFSDKPVLIIFSANNCVYCDKLKHEIQNNKEVQNILKNTYNS
FT                   YYINTSYHKIHNYDNKKTSTEELSREFNIDATPTLVFFTPKHKTLLIYPGFMSAKRLAL
FT                   TMEILKDEKNQKLNEDELFKTLFLAYKEKNV"
FT   gene            76309..79014
FT                   /locus_tag="C1336_000020003"
FT                   /note="C1336_000020003 identified by Glimmer3 with a raw
FT                   score of 12.89."
FT   CDS             76309..79014
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020003 identified by Glimmer3 with a raw
FT                   score of 12.89. Gene function extrapolated from C8J_0032
FT                   (CP000814.1) after blastn alignment (99.27 percent identity
FT                   over a 960 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31711.1"
FT                   /translation="MFKKIFFSFWMSLILLFIYALSCAVATFVENDFGTNAAKALVYNA
FT                   LWFDILHLLLLINLIGIIFIHKLLQRKKYASLLLHSAFIVILLGAAITRYFGIEGGMHI
FT                   REGQSSDIIVTRDEFIALMLYNDEGKVVEYQSFGVAFNPLLHNSFEKKVSMQQNKTINL
FT                   KLLDYEKAPNAMSNPIIKMQISFNNESKEILLTPNYNNENVLPFRLGGEIFALNWGPEE
FT                   IKLPFSLALKDFILDRYAGSMSPSSYASDIEVIDQDKSFEYKIFMNNVLDYGGYRFFQS
FT                   SYDQDEQGTILSVNKDPGKIPTYIGYTLLTLGFLWILFAKNSRFQKLSNYLKNQKNLLL
FT                   ILFCLFAFNIKSFADENTLKLIQNIKENSAKHSILFGSLLVQDFDGRIKPIDTLAMNYI
FT                   HKITKKNDFLGLNYNQIFLGMMMYPQHFRQIKMISVKTAKLKEILGVDKNEKYLAYDDV
FT                   FDGDFYKLSNYIEEANRKKPTLRDQFDKDILALDEKINTAFYIYSGEIFRIFPDPSQKT
FT                   YTWYSPATPMPFDLKDIENIQSLLAKYFFDFEQALSTKDFSKADESLERLKNFQNFYGA
FT                   NLIPTPTQISLELFLNHYNIFDNLTPIYLLLGSMLFILLVYEILSLKKAPKMLKNAIFI
FT                   LIALSVLAHALALIFRWYVGDHAPWSNAYESMVYIAFACAFAGLVFYKRSSLALCTASI
FT                   MAGISLFVAHLGFMDPQITNLVPVLKSYWLNIHVSIITASYGFLGLCFLLGVFSLILFM
FT                   LRNPKKAQIDQSILNLHCINEMAMIIGLALLTIGNFLGGVWANESWGRYWGWDSKETWA
FT                   LISIIVYTMILHLRFISKFNNPYAFASASVIGFYSILMTYFGVNFYLSGLHSYAAGDPV
FT                   PVPKFLYFFIAFTVILILGAFFKRRLKNPV"
FT   gene            complement(79049..79462)
FT                   /locus_tag="C1336_000020004"
FT                   /note="C1336_000020004 identified by Glimmer3 with a raw
FT                   score of 13.10."
FT   CDS             complement(79049..79462)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020004 identified by Glimmer3 with a raw
FT                   score of 13.10. Gene function extrapolated from C8J_0033
FT                   (CP000814.1) after blastn alignment (98.31 percent identity
FT                   over a 414 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31712.1"
FT                   /translation="MPNLYGLVGGEANAIEPKKRPLSSMSPTIILKDGKVFMVVGSPGG
FT                   SRIITTVLQVISNVIDHKMDISTAVEAPRFHMQWLPDEIRTEPFGVIKDVQNNLEKMGY
FT                   KITKEPYMGDVNAIMVDPKTGKIVGSMDTRKEF"
FT   gene            complement(79475..80719)
FT                   /locus_tag="C1336_000020005"
FT                   /note="C1336_000020005 identified by Glimmer3 with a raw
FT                   score of 16.01."
FT   CDS             complement(79475..80719)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020005"
FT                   /product="gamma-glutamyltransferase"
FT                   /note="C1336_000020005 identified by Glimmer3 with a raw
FT                   score of 16.01. Gene function extrapolated from
FT                   CJJ81176_0067 (CP000538.1) after blastn alignment (98.55
FT                   percent identity over a 1243 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31713.1"
FT                   /translation="MRYLAIFAISITLSFGAANPPIQDRTGTGLVLSSHELANKIGKEV
FT                   LDKGGNAIDAAVAVGYALAVVHPAAGNIGGGGFAVIHLANGENTTLDFREMAPLKASRD
FT                   MYLDSKGEVIKDASTIGYLAAGVPGTVKGMSAMLDRYGTMKLKDLMAPAIKLAEKGYLI
FT                   NDRQEQTMLEAKDMFKEFPSSSKYFLKKDGSTYKSGDLFVQKDLAKTLKLIAKEDPDAF
FT                   YKEKIADLIATDMAKNKGIITKEDLAQYQAIWRKPVEGTYRGYDIISMSPPSSGGAHII
FT                   EILNIMENANIENLGFASSKTLHIMAEAIRQAYADRSEYMGDPDFVKIPLDKLTSKEYA
FT                   KEIYAKIPKDKALPSSKVKPGLGQIHEGYNTTHYSVLDSKGNAVSITYTINASYGSGAA
FT                   VEGAGFLLNDEMDDF"
FT   gene            80947..84683
FT                   /locus_tag="C1336_000020095"
FT                   /note="Features C1336_000020006, C1336_000020007 joined to
FT                   form C1336_000020095 to correct 454 sequencing error
FT                   (C1336_000020006 identified by Glimmer3 with a raw score of
FT                   11.57, C1336_000020007 identified by Glimmer3 with a raw
FT                   score of 10.69)."
FT   CDS             join(80947..83913,83913..84683)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020095"
FT                   /product="hypothetical protein"
FT                   /note="Features C1336_000020006, C1336_000020007 joined to
FT                   form C1336_000020095 to correct 454 sequencing error
FT                   (C1336_000020006 identified by Glimmer3 with a raw score of
FT                   11.57, C1336_000020007 identified by Glimmer3 with a raw
FT                   score of 10.69). Gene function extrapolated from C8J_0034
FT                   (CP000814.1) after blastn alignment (98.32 percent identity
FT                   over a 238 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31714.1"
FT                   /translation="MKFEAINEKEFLSPYHRKKPILETELNEFIKTLKDYKINLENNLK
FT                   NNEDSLVANALSKFFENLSFQCEVKSIHKGNSGIDLALKKDGLTQVIIEAKLPNSREFF
FT                   SPSKPNCKALHECILYYLRERKALNSSLKHIIITDFYSFFIFKADLFEELFNKSKYFKE
FT                   AFENFESKNSLFKGNTDEIYKEFEKILNGDSTLKGLFVDLKPILEQDKLSFSKLKPLFK
FT                   IFSKDCLLSEFNPNDANSLNNAFYKELLYILGLCESKQNSKLIIAKSEESKEEQGTFYT
FT                   AINSKLKEENFETILKLLILWLNRILFLKLIESNLVRFNDDKNLKFLNFKKIPDFDKLS
FT                   ELFFEVLAKEKSTRKKSEFAYLPYLNSSLFEKQSIENTLEISNLSNDLKLFYYKNTVLK
FT                   DDKCKAKKGQVGLLEYLFEFLDSFDFGSDDEQSEILSQKELISSSVLGNVFEKLNGYKE
FT                   GSFYTPSFITSYMCKESITKVVLDKFNAQFDLDAKDISELRRSLRKEDKKIQKELLNSI
FT                   KICDPAVGSGHFLVSALNVMLSIYDELNLFDEEFYLEVQNDEILITGRKGEFIEYKRPS
FT                   TPKDKAHLIQQELFYTKKDIIENNLFGVDINPNSCEITKLRLWIELLKHSFYQSFDDEN
FT                   YHDLKILPNIDINIKCGNSLVSYFETGKSLNHYPNIKERINKYKRTVKDYKEGFYTDKS
FT                   HISQEIKNLKISFKNFCFADKFKKEMKGFNDKCEKYSKKYGNFLAINDENLKFFVSANL
FT                   TLFDFDEKEATKEFANLKKEYDNIFNLESNHPFEWRFEFPEILDDDGNFKGFDLIIGNP
FT                   PYIRQEELKELKSHLTKNYKVYKGTSDIYTYFYELGFNVLKDRGGVLNYITSNKYTRAG
FT                   YGEALREFLLKNVKFLEYTDLNGIKVFDSATVDTSILCFEKSKSKDNKFKYLALSNEIL
FT                   KTCAYDIGLYKDYAEFSQNSLSKESFTFSDENTSALKAKIERIGTPLKEWYGLNIYREF
FT                   LTGYNEAFIITTEKRNEILANCKDEVEKERTAKLIRKMLRGRDIKRYSYEWAGLWVINT
FT                   HNGYKNQNGEKVEAINIEHYPSLKKHFDEFYPQLEKRADKGLTPYNLRNCAYLDEFEKE
FT                   KIVWNPVSGEYLFSYIKEHIFFNNSLFMMTLDVFSLKYILAFMNSNCYKWLITLKTNLI
FT                   QTGSYAYGAKDKIERLPIPKINSKNEKLANELISLVDEILKAKEQDKNANTQELENKIN
FT                   SLVYKLYNLNEEEIKIIEGK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            84683..85628
FT                   /locus_tag="C1336_000020096"
FT                   /note="Features C1336_000020008, C1336_000020009 joined to
FT                   form C1336_000020096 to correct 454 sequencing error
FT                   (C1336_000020008 identified by Glimmer3 with a raw score of
FT                   5.89, C1336_000020009 identified by Glimmer3 with a raw
FT                   score of 8.84)."
FT   CDS             join(84683..84961,84963..85628)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020096"
FT                   /product="putative integral membrane protein"
FT                   /note="Features C1336_000020008, C1336_000020009 joined to
FT                   form C1336_000020096 to correct 454 sequencing error
FT                   (C1336_000020008 identified by Glimmer3 with a raw score of
FT                   5.89, C1336_000020009 identified by Glimmer3 with a raw
FT                   score of 8.84). Gene function extrapolated from Cj0033
FT                   (AL111168.1) after blastn alignment (97.08 percent identity
FT                   over a 240 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31715.1"
FT                   /translation="MEELTKEQIQIIEEEIKQILKLDFCCFVDNVFYIDFAPKIEPYDN
FT                   QNKTAIEEQRIIQCSYDDLLYLFKTYPLMFNHCIFDYKIDKKTSIEQIKKLSFLNCNFK
FT                   KEIYLNFQECLDIFQMDNCVFEDRVAIKGKFNDNVYFNNSIFKNYANFHTCEFEKTACF
FT                   YGVRFEKVPNFSACYFKEPKAVNLTNVNIDKLDFKSLEQYIKDNYKDESCKNETKEMQD
FT                   KKEIFKIQNEHQLRYAKNLKDSFRVIKDVLITQNDKLEAQEWHKLELYAKEKELEIQLG
FT                   GDNKDSIRNNRKIKKLQIKKIIMKLICFQNLKI"
FT                   /artificial_location="low-quality sequence region"
FT   gene            85604..87016
FT                   /locus_tag="C1336_000020010"
FT                   /note="C1336_000020010 identified by Glimmer3 with a raw
FT                   score of 5.30."
FT   CDS             85604..87016
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020010"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020010 identified by Glimmer3 with a raw
FT                   score of 5.30. Gene function extrapolated from CJE0032
FT                   (CP000025.1) after blastn alignment (94.65 percent identity
FT                   over a 299 bp alignment) - for clarity, the original
FT                   product name 'membrane protein, putative' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31716.1"
FT                   /translation="MFSKFKDLGDIYVKICDFVVCFIMLIGRSIFGFLLSIIEIFCNVI
FT                   KSICKIIQIILSCIFCITSIDRILKLEYLKFYRKISSSGKTMLDYTLWFDYILLQVYRN
FT                   TSDHHTNFLKILNFTILMISSYAIFGLLFLNNMDFILSFDPMTIATTNYIVLLMLLIIF
FT                   IDLTRQLYQYGAILLFLICGLFIISIVSFLSPTCIPAFYFLIYFASVLISYLLFICKIK
FT                   LFIFISRLFAYTCLIGVVILKPQFINPFVGIFSSDKLYESKFEKRLNDLNASAIINLVK
FT                   LSQKDFNFIKEYINISFTELNSAKTLIIANKEKLKEILSKVYNDKYVSDYKKVLNELEN
FT                   NTSNVKNIIEEIDNKNNNSVVSAQLNKFLKLNFSQEIDILYAIKSNFSISEKLSPEQMA
FT                   LFDQKDSQDKLKSVLALLKFKSSFEGILEVINQDEIIQNTIKSTSVLYNIILLLCIFSL
FT                   QKTARKNSIVPS"
FT   gene            87038..88735
FT                   /locus_tag="C1336_000020011"
FT                   /note="C1336_000020011 identified by Glimmer3 with a raw
FT                   score of 8.62."
FT   CDS             87038..88735
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020011"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020011 identified by Glimmer3 with a raw
FT                   score of 8.62. Gene function extrapolated from C8J_0036
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 114 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31717.1"
FT                   /translation="MKEFDEKLAQYGIFTINVVENIDLIKKEIVLENISIERIDFNILQ
FT                   EKGIKRLIIKNSEILEIYFSKTNNFFIYFLNCDFKCKLIAKKCIFQDQVKFIKCIFEKC
FT                   VDFNASKFKSKVSFAISIFKENARFIKTEFLAKCNNHKIIENNFKEVKFCNNVTFRRAK
FT                   FESKVSFAISIFKENARFIKTEFLAKCNNHKIIENNFSETIFYNKTNFYKAKIVSKIDF
FT                   KISRFKGEIRFAETKFLSKLDNEIANNFREVVFEDKVYFNKTKINTQINFKMAKFKNNV
FT                   EFVNLHNNVSFNNVNFKGIVNFENLNINTLNFKNVIFNNIVSFDNIRFDNNCKPNFENC
FT                   TFSDQFNIEHKYIEYKFDEIEKTQEYDKLLNYRDLFRKLKSNRIAHHNLIDASELRAQE
FT                   LYARELELKHKENKSLKEKIERWQLIFYRKLCDHHTDLLLNLKWLVVVIGLFALLYFVS
FT                   RMIQDISLLKALNQYGVCLSIVGVFNLLCLYWFGCIKKIDFFVYLNLIVVLWVICYMSK
FT                   IIFGIVNIIGDKSYNGFENALITIYTILLALVLFSLQKTARKNSIVPS"
FT   gene            88758..90773
FT                   /locus_tag="C1336_000020012"
FT                   /note="C1336_000020012 identified by Glimmer3 with a raw
FT                   score of 7.90."
FT   CDS             88758..90773
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020012"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020012 identified by Glimmer3 with a raw
FT                   score of 7.90. Gene function extrapolated from C8J_0035
FT                   (CP000814.1) after blastn alignment (98.45 percent identity
FT                   over a 194 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31718.1"
FT                   /translation="MKETPKILEKCCEETHQNHKSEGKSEDEIKKILSEVLSINEQNIF
FT                   TPSHKETNGIIKKIKEKEDFRQSDGLFSDDEKWYLVCGKEDSKIDISLYNNKVKKIPCN
FT                   VIFNNYNIDLHIDELKGVKKDNTETIKNHLYFYNCAFEKGLIKLTNIIFEKTLTFNQCV
FT                   FYNNLDIHQNQFLDHLVFINCHDNQDKKITSLDLQENEFKGYFFIKNCAIEKINLWKNK
FT                   FKNRCYFMDSVFGNKNNENIKLNFSNAHFEDNAYFNNSEFYSYADFHECEFDDIACFYG
FT                   VKFDKTPNFSQAIFKGNLNVVNTNLNFTFDNLEEKIKQEYEDFNKNIENKKPLDKFAND
FT                   FRDSFRIFKSALIKDNNLLDASNFHKYELYCKEIELKQNWDKKGENVKNTTDLEKNVSR
FT                   IRDFVDFLLLGFYRKLCDHHTDFLKVFNNLILLIALYALFVFGFTWLHDDKLEDTRAIL
FT                   TLFGFFDKLKFCFDIGVGILIVLGFILVLYKIDKNFIKSFLNILKIFQSLSHIRKWLLK
FT                   IFKKEIFVKLSLTLKIILLDLGFLVESLIIIFFISCVFYVLFSLFGFFLNLGKDFGYSL
FT                   LINTLFVGLYIYLVYTKSLFFGRYVVLIFSYIVFIIMLIKQPNVIHPLIGKIANESDKF
FT                   FNYPSLIVLNILYTILLALVLFSLQKTARKNSIVPS"
FT   gene            complement(90803..91504)
FT                   /locus_tag="C1336_000020013"
FT                   /note="C1336_000020013 identified by Glimmer3 with a raw
FT                   score of 8.22."
FT   CDS             complement(90803..91504)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020013"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020013 identified by Glimmer3 with a raw
FT                   score of 8.22. Gene function extrapolated from CJE0033
FT                   (CP000025.1) after blastn alignment (98.58 percent identity
FT                   over a 702 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31719.1"
FT                   /translation="MKTNNIFMALAIVLASLILAFGFNKALSDFKTLERSVSVKGLSQK
FT                   EVEADTLILPIKFTRSNNNLTNLYEELEQDKENIIKFLEKQGIKEDEISYNSPNIIDRL
FT                   SDPYSNDTQATYRYIGTANLLIYTQNVKLGKSILENISSLAKFGIVTKIDDYDIEYLYT
FT                   KLNEIKPQMIEEATLNARNAAIKFAQDSNSHLGKIKKASQGQFSISNRDKNTPYIKTIR
FT                   VVSTIEYYLKD"
FT   gene            complement(91501..92703)
FT                   /locus_tag="C1336_000020014"
FT                   /note="C1336_000020014 identified by Glimmer3 with a raw
FT                   score of 8.41."
FT   CDS             complement(91501..92703)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020014"
FT                   /product="drug resistance transporter, Bcr/CflA family"
FT                   /note="C1336_000020014 identified by Glimmer3 with a raw
FT                   score of 8.41. Gene function extrapolated from CJE0034
FT                   (CP000025.1) after blastn alignment (98.98 percent identity
FT                   over a 491 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31720.1"
FT                   /translation="MQKHTKIHGFAKFKLIVILALMSSIAPLSTDMYLPALSHVEQSFQ
FT                   TNSFLTQLSIASFFIAFALGQLIYGPLSDIFGRKIPALVGIFFFIVSSLFCVIIDDIYA
FT                   FIALRFFEALGGCAGVVIARAIVNDLFEIKEAAGIFALMMVFSSLAPMLSPTFGGILLE
FT                   YFSWHSIFATLFALGILLFLMILFGLKESAPHLKNKKFSHHEAMKSYKFVLSDKRFLVY
FT                   ILCASFALAAMFAYITGSSFVFTQFFGLSEQKFALLFGANALGFVICANINARLVLKYE
FT                   SEKILAKALMIMFISTVILLVNAFFHPNFLLFELSIFTSIAMLGFIAPNTTTLAMARFK
FT                   EHSGTASAVLGTVQFGFAGFISFVVGAINANTPIILAFVMCACVLVANMIYFLIKIKEK
FT                   K"
FT   gene            92807..94156
FT                   /locus_tag="C1336_000020015"
FT                   /note="C1336_000020015 identified by Glimmer3 with a raw
FT                   score of 12.98."
FT   CDS             92807..94156
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020015"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020015 identified by Glimmer3 with a raw
FT                   score of 12.98. Gene function extrapolated from Cj0036
FT                   (AL111168.1) after blastn alignment (98.51 percent identity
FT                   over a 404 bp alignment). Similar to Cj0036."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31721.1"
FT                   /translation="MLNLNQNEQIKCPSCGSFIDISAALYAQILDKAKQEMLKQKKEFD
FT                   DEVNAKRAEYTKALNDLKTQKIEQEKLISEQVSQKLLLEKQKFEQELLTQKQNFQKEFS
FT                   EKFNKEHENEMKIMQEELEKKSKELSEFLSIKAENEKLKREQKENEERLKFQAKEEAFK
FT                   EFKEQESKNLEFEREKMRLEFQKSTQEQDLKYKELETNFKSVAQKLEDAQRRIEQGSQQ
FT                   LQGEAAELLIEEYIQSEYLSDEVKEVPKGVNGADCLHIVKDNFGNICGSILCESKRTKE
FT                   FNKEWLDKLKLDSIAAKSDIAVLITKTMPKDKEKAHFKEGILICTFNEFKGVLAVLRES
FT                   IINAYKLKNALQNKDEKNHILYEYLNSKEFNTQITFILKTYQNMKEELEAEKRALQNIW
FT                   KKRERAIENLSFNSTAIVSSLNAIFSDLQGGNLIGEEGIKSLENLAKDED"
FT   gene            complement(94180..95223)
FT                   /locus_tag="C1336_000020016"
FT                   /note="C1336_000020016 identified by Glimmer3 with a raw
FT                   score of 12.25."
FT   CDS             complement(94180..95223)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020016"
FT                   /product="cytochrome c family protein"
FT                   /note="C1336_000020016 identified by Glimmer3 with a raw
FT                   score of 12.25. Gene function extrapolated from
FT                   CJJ81176_0075 (CP000538.1) after blastn alignment (99.52
FT                   percent identity over a 1044 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31722.1"
FT                   /translation="MKKHILLLGLCLSLSLSAKSVSDYKVGEELSDKEGVEYFKELSKR
FT                   PVQEWPNKNLSINDVPKGKQGDLIRYGIELLSKTESTLGPYSKLKKTSNEVNCISCHMD
FT                   NDGNGLPGTKKYVIPFLNVLNNYPRLDIETMKIISVEDRIRGMGGTDSHRFPNDSKEMK
FT                   AILAYFKWLKEAYGIKDGVKLEGDFFAKMNFPNRPADPVRGKKLFEENCVACHGERGLG
FT                   VKNDNYEQGSGHLYPSLLIYPDGGHMAMIPFLARFLKSAMPFGASADNPILSDEDALDI
FT                   AAYVNTGFVRMPITTTENRAGLDTAYSKSPSLKPEYFASPQQNLDPKEYIKVKYGPWKN
FT                   PNHFPGE"
FT   gene            complement(95401..96048)
FT                   /locus_tag="C1336_000020017"
FT                   /note="C1336_000020017 identified by Glimmer3 with a raw
FT                   score of 13.55."
FT   CDS             complement(95401..96048)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020017"
FT                   /product="putative poly(A) polymerase family protein"
FT                   /note="C1336_000020017 identified by Glimmer3 with a raw
FT                   score of 13.55. Gene function extrapolated from Cj0038c
FT                   (AL111168.1) after blastn alignment (97.55 percent identity
FT                   over a 572 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31723.1"
FT                   /translation="MDLKSLENNRLYILKRLGILKFLSIIEALLVGFLAFVFIRDALIA
FT                   VILAVFVGVFFFRFTAKKLKLAQKELQIDALNLFLRRFGAKFKKQSLSQKDFLKLGLTK
FT                   DLKEFKSQNCFEFKDFKIYDIQFLDENKRFFCGILLEILSANKNPSFENEDQIYIKLKD
FT                   KNFTLNHIFSKENHYLIATLSNPFFIDIKKDLENNFKNLEENLNSIKNKLFK"
FT   gene            complement(96048..97856)
FT                   /locus_tag="C1336_000020018"
FT                   /note="C1336_000020018 identified by Glimmer3 with a raw
FT                   score of 11.22."
FT   CDS             complement(96048..97856)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020018"
FT                   /product="GTP-binding protein typA-like protein"
FT                   /note="C1336_000020018 identified by Glimmer3 with a raw
FT                   score of 11.22. Gene function extrapolated from C8J_0042
FT                   (CP000814.1) after blastn alignment (98.07 percent identity
FT                   over a 1809 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31724.1"
FT                   /translation="MENIRNIAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDSN
FT                   DIEKERGITILSKNTAINYKGTKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQEGV
FT                   MPQTKFVVKKALSLGLKPIVVINKIDKPAADPERVINEIFDLFVALDANDEQLDFAIVY
FT                   AAAKNGYAKLDLNDESDNMEPLFKTILERVPAPSGTNDNPLQLQVFTLGYDNFVGKIGI
FT                   ARIFNGVVKKNQSVMLAKADGTKVNGRISKLIGFMGLEKMDIEEAGSGDIVAIAGFEAL
FT                   DVGDSVVDPNNPMPLDPLHIEEPTLSIVFSVNDGPLAGTEGKHVTSNKIAERLEAEMKT
FT                   NIAMKYESTGEGKFKVSGRGELQITILAENMRREGFEFCMGRPEVIVKVEDGVKTEPFE
FT                   HLVIDVPEEFSGAVIEKLGKRKAEMKTMAPTGDGQTRLEFEIPARGLIGFRSQFLTDTK
FT                   GEGVMNHSFLEFRPFSGAVEKRNNGALISMENGVALGYSLFNLQERGVLFIEPQTKVYT
FT                   GMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKLSLERALEWIEEDELVE
FT                   VTPINVRVRKRYLDPTQRKRMEKAKS"
FT   gene            97991..98314
FT                   /locus_tag="C1336_000020019"
FT                   /note="C1336_000020019 identified by Glimmer3 with a raw
FT                   score of 16.70."
FT   CDS             97991..98314
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020019"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020019 identified by Glimmer3 with a raw
FT                   score of 16.70. Gene function extrapolated from CJE0039
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 102 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31725.1"
FT                   /translation="MSKPLNEEIFVEFKSDLAERKNEVLLQVLELLETFRSDENEKMAR
FT                   ISSELTEILENEENLEKILNAKNLEELLNILTALNEDKMIKVYEDSYLKEKFPNVMVDK
FT                   FLK"
FT   gene            98334..100193
FT                   /locus_tag="C1336_000020020"
FT                   /note="C1336_000020020 identified by Glimmer3 with a raw
FT                   score of 13.57."
FT   CDS             98334..100193
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020020"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020020 identified by Glimmer3 with a raw
FT                   score of 13.57. Gene function extrapolated from C8J_0044
FT                   (CP000814.1) after blastn alignment (97.52 percent identity
FT                   over a 766 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31726.1"
FT                   /translation="MSNLAPQNDVLNLTPSKTSTTSSSFSKTSKNKEHESSDSKNSTKD
FT                   DTESFLNSLLNSIDETNEFLPDHMKISQKEVVNEAMNRLQKGAFDESDKISIFESASFM
FT                   QILSLLDKLKTDTADVKLANLSTQLSSLIKTEANFNALKGASNLSELLDIAKDLGLNVK
FT                   NIKVDRLLDLKATFPNLDKADFFKGAVDNVFKEIINNKISNMSKNLNHNLQNTTHTTST
FT                   HSTQKTNSKDSGSLLSQTLKNLDSMLSSKESKHEKNDKVKSKIEEDTTDVKNTLKNIKN
FT                   DEFAKNLTEELNIKDKKNQDNLNKDNTKDAKNNEQIKKDEKELNNLNKESKDLNKDFNK
FT                   ELNKNQEKNNLNQENIQDQNKNLKSNNQNLNLDKNSNQEIVKDAQNLVSNLTQKDFSLN
FT                   KEPKNNNKENKDIKQNFFDQKLNFENLNKTQAVQNKENNPNFNNNTNKETFTQEQTKTH
FT                   SENVDKNNLDDLNSLVKDLSKVTQNNARNITPKETLQYFSQDLKEAVDQYKAPITKLSI
FT                   TLNPNNLGEVEVTLIQRGNNLHINFNSNTNAMNLFIQNQVEFKNSLVNMGFTGLEMNFS
FT                   DQGKREQNQNQGKNRSGYGFKDALDGKNESEKVNLELVLAKYF"
FT   gene            100252..101130
FT                   /locus_tag="C1336_000020021"
FT                   /note="C1336_000020021 identified by Glimmer3 with a raw
FT                   score of 12.31."
FT   CDS             100252..101130
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020021"
FT                   /product="flagellar hook assembly protein"
FT                   /note="C1336_000020021 identified by Glimmer3 with a raw
FT                   score of 12.31. Gene function extrapolated from
FT                   JJD26997_0057 (CP000768.1) after blastn alignment (92.73
FT                   percent identity over a 812 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31727.1"
FT                   /translation="MATTNWNSNLNWTNTANTNQTSNKDTKVDNSSSSNSSGVVSNPNA
FT                   TLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQNTNTTMQKMVETMEKL
FT                   SNSFSTSMSTAAVGAIGKMATVNENKVKLTGADEVIALKMYLPEDSDDKGITLEVYDKN
FT                   NKLVFSEKSNEGKEVSKGLFTLEWPGRNNDGVYAGDGEYSVKVVYNNKNGEKITANYGT
FT                   YPIEGIKFVDGIAYAKMGGQYVSFDDIGEISDYKLGSSSTSVGDSSGGDSSDGDSSNSG
FT                   STEEGDKEEKA"
FT   gene            101134..102771
FT                   /locus_tag="C1336_000020022"
FT                   /note="C1336_000020022 identified by Glimmer3 with a raw
FT                   score of 14.21."
FT   CDS             101134..102771
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020022"
FT                   /product="flagellar hook protein flgE"
FT                   /note="C1336_000020022 identified by Glimmer3 with a raw
FT                   score of 14.21. Gene function extrapolated from C8J_0046
FT                   (CP000814.1) after blastn alignment (92.49 percent identity
FT                   over a 1638 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31728.1"
FT                   /translation="MMNSFYNGISGVKTNSFGIDIYANNIANVNTTGFKYSDAQFKDIF
FT                   YSTITTQSTNPAQGGYGSGSASSNVVFEQGSLVASDSEFDVALQGKGFFGVLGADGNAY
FT                   YTRNGSFKRDANGYLVDSYGNFVLGTMNPAFTGINYSDRVAGLMGDYLNTGTLVNNGFT
FT                   VNSNNSFGIGTTASQGAIKVPVNMYLPPQVTQNVKWSGSLNTNTTTEVVKVDLDPGKFN
FT                   ITKTEDGKYVVSGSVSKEDVFSAKVGDRIILNFTDDNGVKKSFEATLDENLNFKSNELD
FT                   LKGLDENSIKLDTAQISTEQQKANKDILESPIYNADGSKSTLRVMLERVLPQEGDNIQY
FT                   KAIAQIYDSNGNAVGNPTEGNMVFDKNGALLQNNITSIANPNGGTINIDLGSPYDANKP
FT                   GSGYSGIYIKEGVEKNVVTQQDGVAEGFFKQYDISDDGSIVAQFSNGKNAIVGKLALYN
FT                   FINEQGLAAMGDNIFAATANSGDASFIMKNGQIVNTAKFKGGFLEQSNVDLSVELSNLI
FT                   VTQKAFDASSKSITTSDQMIQKAINMKR"
FT   gene            complement(102775..104646)
FT                   /locus_tag="C1336_000020023"
FT                   /note="C1336_000020023 identified by Glimmer3 with a raw
FT                   score of 9.94."
FT   CDS             complement(102775..104646)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020023"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020023 identified by Glimmer3 with a raw
FT                   score of 9.94. Gene function extrapolated from CJE0043
FT                   (CP000025.1) after blastn alignment (95.11 percent identity
FT                   over a 880 bp alignment) - for clarity, the original
FT                   product name 'conserved domain protein' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31729.1"
FT                   /translation="MSYEIKTLETFNPFESLKYEQASTDQILDFRIIDFKLLCSNIKPA
FT                   KTKTYERKDFDLFYADDFFVKNYNTMVQKFLIEIYPKTQKNCFVVKLKSNPSLTYLKAN
FT                   INFLDNFKYYPNLKFDILQNIYKVMIKQKFLILRLDKNLFDKIDDFILSIQKSPSIKEI
FT                   ELEIAKGVDKIEHKSDEIIYHRDVNEECFDENINYDEGNYCKPIEKNELLFEYIYRILG
FT                   KEGRNLRGEILHLNPIAFFDNPFIIKDESIYTEELEDRIKYFSANYGFLNKDRSGYSVT
FT                   NNLKLSQVGLKTTGSIKTNTDENINLEITNFDINDDAVKSGIVNVQASDIKVNGSIGAT
FT                   KLYGRNISIKGLTHAKSEIFAQDIFITTHKGTLQADTVYIKNLENGIVIAKNVFVENCM
FT                   GGKIEAENIYICNLLADNILYPKKNLIITNNIKFKNNIVISPLDFINNKSNSETENLTN
FT                   LSLKTKSKLDNIISQMQNYYDYLIKNQIKIIKLQKTEKLNAIDMKFSNLYRDIIKKYNH
FT                   LSVLYKKLIKLKYHIDAKLNFLDEMVYNVKIYIKAENIGEDNFLKFYPKTNTELELKHH
FT                   INLKDYEKVLYLEKGQQASYIKSSHDYSESDIEEIKIIFEKLEKDNS"
FT   gene            complement(104649..105326)
FT                   /locus_tag="C1336_000020024"
FT                   /note="C1336_000020024 identified by Glimmer3 with a raw
FT                   score of 8.20."
FT   CDS             complement(104649..105326)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020024"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020024 identified by Glimmer3 with a raw
FT                   score of 8.20. Gene function extrapolated from
FT                   CJJ81176_0083 (CP000538.1) after blastn alignment (88.43
FT                   percent identity over a 389 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31730.1"
FT                   /translation="MEIKWSKDFSIKNIQLDKQHELIFEIAEIANDLALKIQDNDVQHK
FT                   NDLKQILTKLFQYVKIHFKDEEKFMESIDFPLIEEHRKSHQILLKKTKELLEHSNDIVK
FT                   MSFELSTLTKDWILDHFAIEDLWIANFTKKALHLQEIHYNLEQYIKLKSIRQDLKTEKT
FT                   YDYICNCYLRTHAVPQTIHEELVSKENTLKCEKCGQILVHLDHIDLNQNYEMLNHILEN
FT                   IGV"
FT   gene            105806..107614
FT                   /locus_tag="C1336_000020025"
FT                   /note="C1336_000020025 identified by Glimmer3 with a raw
FT                   score of 14.41."
FT   CDS             105806..107614
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020025"
FT                   /product="2-oxoglutarate/malate translocator"
FT                   /note="C1336_000020025 identified by Glimmer3 with a raw
FT                   score of 14.41. Gene function extrapolated from
FT                   CJJ81176_0089 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 99 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31731.1"
FT                   /translation="MNRSKIPLLVLCILIAAVFWLMPTPVGLEDNSWHFLGLFIAVIMA
FT                   VILQVMPLGAVCMIAIAIIALSGITTTQSSVRATHIKTLEGIVLRDNSNIYKTTMDEAV
FT                   EATILQALINANISRNLKAKVNEILKSSTDINYQIENLSKIYTKATSKTSTQQLIDETK
FT                   ISALNTLALDFLSQKSIDEKVNTAISNLKSKTGIKDALSGFSNSLIWLIVISIIVARGV
FT                   IKTGLGERLAYHFISIFGKKTLGIAYSIAFCETILAPVTPSNTARAGAIINPIVQAIAR
FT                   SFKSTPEDGTQNKIGTYLSLVNYQANPISSAMFITATAPNPLVVDLIAQATNLEVHLTW
FT                   GQWALGMFLPGIAAMLLMPLVLYFLSPPEIKSTPNASTFAKDKLKELGKMKNSEKIMLS
FT                   VFVLLLLLWAGTFGLLFGISLDATSVALLGLSLVLISGVLTFGEVLAEKAAWNTLVWFS
FT                   ALVMMATLLGKLGVTQFLAEALGEFASAMGLGEISIMIFLSLAFLYTHYFFASTTAHIS
FT                   AMFFVFYSAGLALGTPPLLYAFIMIASGNVMMALTHYATGTAPVIFGTGYVTLKKWWSI
FT                   GFVISIVDIVVMIAVGLIWWKILGFY"
FT   gene            complement(107642..108658)
FT                   /locus_tag="C1336_000020026"
FT                   /note="C1336_000020026 identified by Glimmer3 with a raw
FT                   score of 15.49."
FT   CDS             complement(107642..108658)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020026"
FT                   /product="tRNA
FT                   (5-methylaminomethyl-2-thiouridylate)-methyltransferase"
FT                   /note="C1336_000020026 identified by Glimmer3 with a raw
FT                   score of 15.49. Gene function extrapolated from C8J_0050
FT                   (CP000814.1) after blastn alignment (98.03 percent identity
FT                   over a 1017 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31732.1"
FT                   /translation="MKILVAMSGGVDSTVTAYKLKNLGHEVIGCYMKLHGKPNYHEENI
FT                   KKVEKVANFLQIPYHILDLQEDFKNKVYMPFVDTYKEGKTPNPCALCNRFIKLGKLLEF
FT                   AKSLGCEKLATGHYARLENNLIKTAVDESKDQSYFLASADKEALKYLIFPLGEMKKEDV
FT                   KKFASTIEVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGEVLDSSGKVVGKHEGY
FT                   MHYTIGKRRGFEVRGAHEPHFVLKINPKQNQIIVGTKEELKISEFKLKNINLFIDAKEL
FT                   DCEVKIRYRSKSTPCKVEIYEDKSAKITLKNPVYGLASGQMAVFYDYDKVIASGFIE"
FT   gene            complement(108658..109263)
FT                   /locus_tag="C1336_000020027"
FT                   /note="C1336_000020027 identified by Glimmer3 with a raw
FT                   score of 11.03."
FT   CDS             complement(108658..109263)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020027"
FT                   /product="lysine decarboxylase family protein"
FT                   /note="C1336_000020027 identified by Glimmer3 with a raw
FT                   score of 11.03. Gene function extrapolated from CJE0049
FT                   (CP000025.1) after blastn alignment (98.51 percent identity
FT                   over a 606 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31733.1"
FT                   /translation="MNEKISQDLEKFANIPNLKNAVTFFGSARLKEDNFYYQQAKILAQ
FT                   KCVQNGFCVISGGGGGIMRAANEGAFSQKNNTNSMSSVGFNIFLPHEQKLNDFVEYNIT
FT                   FESLAIRKMALIEKSLAFVIFPGGFGTLDELCEILTLKQLEFKKDVPIILFGGEFWRGF
FT                   DEFVRNSLLKLEVISKGDELKYKITDDLNFIINTLKEI"
FT   gene            complement(109384..110061)
FT                   /locus_tag="C1336_000020028"
FT                   /note="C1336_000020028 identified by Glimmer3 with a raw
FT                   score of 11.14."
FT   CDS             complement(109384..110061)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020028"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020028 identified by Glimmer3 with a raw
FT                   score of 11.14. Gene function extrapolated from Cj0416
FT                   (AL111168.1) after blastn alignment (97.73 percent identity
FT                   over a 88 bp alignment). Similar to Cj0416."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31734.1"
FT                   /translation="MITLSSFNRYFGNNPLQTLTKIRDESIENGNPELTKEAREKLGNS
FT                   FINMYKDYVKLSDKVELVEGSIEDKLRKNEFSESEVKSLFKWIDENTKSPHWMEVDGVS
FT                   YDEAYIKVFHTSKNIDEFKTKYLELQQKYLVDFRNINSSQKNSEENKEKPFKPMQAESK
FT                   NKETYKDDSKMNELVKKLLEGKFNTSKELELLFGMKFSDDDVGEFNKVLSLNSAPKSID
FT                   IKA"
FT   gene            complement(110058..110663)
FT                   /locus_tag="C1336_000020029"
FT                   /note="C1336_000020029 identified by Glimmer3 with a raw
FT                   score of 11.78."
FT   CDS             complement(110058..110663)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020029"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020029 identified by Glimmer3 with a raw
FT                   score of 11.78. Gene function extrapolated from
FT                   JJD26997_0066 (CP000768.1) after blastn alignment (99.01
FT                   percent identity over a 101 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31735.1"
FT                   /translation="MLKKLASSLILGSLLASSAFAGDFLAKVSNGALSDNSQGVKALNL
FT                   DEMKQVKGGYQVVFLHNGTQWNPADELYAIAKYTEGELQYMANYLQGNANAPQGLCGID
FT                   QTSCSNPSKNRFTAFLQVTQNSLSILPVYTVKRQVKVSDLGKPYVLFTYGVGAYDTQNQ
FT                   QMYKFNSSPMLNNNMIIKEMANKYKGQMESALGGWYAR"
FT   gene            110792..111646
FT                   /locus_tag="C1336_000020030"
FT                   /note="C1336_000020030 identified by Glimmer3 with a raw
FT                   score of 9.96."
FT   CDS             110792..111646
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020030"
FT                   /product="hmcD domain protein"
FT                   /note="C1336_000020030 identified by Glimmer3 with a raw
FT                   score of 9.96. Gene function extrapolated from CJE0054
FT                   (CP000025.1) after blastn alignment (97.66 percent identity
FT                   over a 855 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31736.1"
FT                   /translation="MKKICLAFMVLVNCVFASDELNIDSLFKKQIGLRSITSFSLLSTG
FT                   NANSYSLYPNITIGGDPTIWNDTKQVFLTQTFIYTITPKFDILISGGGSYARQEYTNFF
FT                   TNEYSSKNRIGFDNLWLGFIYTGDSIADLIPQITFQTAVVQREKAINQTKNFYLKSQSL
FT                   QASLRGYSDPVVYSIYTGFGYNQSRKFKTLKIEYGNSIYVGGDLSIILSPKITLDLGAE
FT                   QRFQTEQKINGYQNSEVRSIPTLSLGSTYSINSDTAVSVNASFGGSSASPDSIFGISLW
FT                   KKF"
FT   gene            111631..112230
FT                   /locus_tag="C1336_000020031"
FT                   /note="C1336_000020031 identified by Glimmer3 with a raw
FT                   score of 10.99."
FT   CDS             111631..112230
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020031"
FT                   /product="putative peptidase C39 family protein"
FT                   /note="C1336_000020031 identified by Glimmer3 with a raw
FT                   score of 10.99. Gene function extrapolated from Cj0058
FT                   (AL111168.1) after blastn alignment (98.50 percent identity
FT                   over a 600 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31737.1"
FT                   /translation="MEKILKILLFLLILALSAKAEWVVKSYQEIKNERVIRQTYEQSCG
FT                   ASSLATLLNILDDQKKFDELELLKIMSGQELYTDMVSFADLSDAVKKLGFQSNSYQINR
FT                   ENLDKLVNIPMLVKIEDDPRFPHFVIIINHKGNYLQILDPSHGEYISSKSQFFSIWDRY
FT                   NKGGYALIVAPKKELKPFKLNTPKSLHFDFSPFSLF"
FT   gene            complement(112279..113121)
FT                   /locus_tag="C1336_000020032"
FT                   /note="C1336_000020032 identified by Glimmer3 with a raw
FT                   score of 16.71."
FT   CDS             complement(112279..113121)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020032"
FT                   /product="flagellar motor switch protein"
FT                   /note="C1336_000020032 identified by Glimmer3 with a raw
FT                   score of 16.71. Gene function extrapolated from
FT                   CJJ81176_0097 (CP000538.1) after blastn alignment (98.05
FT                   percent identity over a 822 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31738.1"
FT                   /translation="MINDFLKMFTNECISTIEGLTGKSAEFSEYKEFDVNASDTLKAPL
FT                   VYAIFDIANGGKIGILAGAVLMSAIGEWMMGEEEITKNDKLGPDEMDAAKEAIQNIISA
FT                   FSTTLGAQKDIPKMDFSIESCEFVPESVDFKDFKKLFLYDVKIGDLEEQVSLAMDQTLH
FT                   NILSGKPAETGNTSTDSNHNAEEKAIMLSEELKNINLIMDVRLPVRVRIGNKKMLLKDV
FT                   LTMDIGSVVELNQLANDPLEILIGDKRIAYGEVVIVDGNFGVQITEIGSKKERLEQLR"
FT   gene            complement(113118..114197)
FT                   /locus_tag="C1336_000020033"
FT                   /note="C1336_000020033 identified by Glimmer3 with a raw
FT                   score of 12.66."
FT   CDS             complement(113118..114197)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020033"
FT                   /product="flagellar motor switch protein FliM"
FT                   /note="C1336_000020033 identified by Glimmer3 with a raw
FT                   score of 12.66. Gene function extrapolated from CJE0057
FT                   (CP000025.1) after blastn alignment (98.15 percent identity
FT                   over a 1080 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31739.1"
FT                   /translation="MAEILSQEEIDALLEVVDDNTDTPIASNSKDEKDERNIVVYDFKR
FT                   PNRVSKEQLRTIKGIHDKLARNLASQISSMMRSIVETKLHSVDQMTYGEFLMSLPSPTS
FT                   FNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGQGDSYEASRELTDIELNLLDSILRIIM
FT                   QRLKESWATVTEIYPSIEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMVNICYPVV
FT                   HLESILSRLANRDIMMGETSAKKSRNKELKTLIGRAEVVYEAILGKTLINVHEFLELKQ
FT                   GDILRLDREADDKAIVSIDKKDVFLAQIGLHRFRKSIKILELIRTDKDEIKEILEKYEE
FT                   ERKAKASVYDEPEEEDEEI"
FT   gene            complement(114197..114913)
FT                   /locus_tag="C1336_000020034"
FT                   /note="C1336_000020034 identified by Glimmer3 with a raw
FT                   score of 13.80."
FT   CDS             complement(114197..114913)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020034"
FT                   /product="RNA polymerase sigma factor for flagellar operon"
FT                   /note="C1336_000020034 identified by Glimmer3 with a raw
FT                   score of 13.80. Gene function extrapolated from Cj0061c
FT                   (AL111168.1) after blastn alignment (98.82 percent identity
FT                   over a 170 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31740.1"
FT                   /translation="MNPKKDEEMLKEPPKAYAQMLKKEQDELVLSYMPALRAMAFRLKE
FT                   RLPSSIDVNDLISIGVEEMIKLSRRYDKEQNDNFWGFARKRVNGSMLDYLRSLDVMSRN
FT                   NRKIIKDIDAIMDEYFLENECEPDDEYLAKKLDLDVEKIKEVRTAHAISYTLPIDEQIE
FT                   LYNEDNTLEKIEKEELLEKIHKVLDDLKERDQLIIQLYYYEELSLKEISEILQISESRI
FT                   SQIHKKLLKKLRERLV"
FT   gene            complement(114870..115226)
FT                   /locus_tag="C1336_000020035"
FT                   /note="C1336_000020035 identified by Glimmer3 with a raw
FT                   score of 4.93."
FT   CDS             complement(114870..115226)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020035"
FT                   /product="putative membrane protein"
FT                   /note="C1336_000020035 identified by Glimmer3 with a raw
FT                   score of 4.93. Gene function extrapolated from
FT                   JJD26997_0072 (CP000768.1) after blastn alignment (100.00
FT                   percent identity over a 88 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31741.1"
FT                   /translation="MRPENYVAFFTVCGFFIGLAFSIISIDEAFDILIFTCFITFMFYV
FT                   FVHIAIMNFIDVKKISGRIFNKHDYEKTSNNIINDLVIREKKMDIILEKLNEEREELKK
FT                   NESKERRRNAKRAA"
FT   gene            complement(115245..116111)
FT                   /locus_tag="C1336_000020036"
FT                   /note="C1336_000020036 identified by Glimmer3 with a raw
FT                   score of 14.59."
FT   CDS             complement(115245..116111)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020036"
FT                   /product="putative ATP-binding protein"
FT                   /note="C1336_000020036 identified by Glimmer3 with a raw
FT                   score of 14.59. Gene function extrapolated from C8J_0056
FT                   (CP000814.1) after blastn alignment (99.59 percent identity
FT                   over a 243 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31742.1"
FT                   /translation="MNNQANKLRNLMSQNGTKKSQNTHFIAITSGKGGVGKSTISANLA
FT                   NVLANNGYKVGLFDADIGLANLDVILNVRIQKNLLHVLRGECSLEDILIEVKPNLWLIP
FT                   GESGDEILKYNDKNIYERFLNQASILDELDFLIIDTGAGIGGNILNFLEMADEVIVVTV
FT                   PDPAAITDAYATIKTTSKTKENLLMLFNVVKNENEALKVFENIKKVADANIKNPLNLEF
FT                   LGHLSASKDVSGSIKKRTLFSDENTASSDELKALASKLLYRLERKVLDNVSNRSFSSFF
FT                   RKIIERF"
FT   gene            complement(116104..117558)
FT                   /locus_tag="C1336_000020037"
FT                   /note="C1336_000020037 identified by Glimmer3 with a raw
FT                   score of 12.00."
FT   CDS             complement(116104..117558)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020037"
FT                   /product="flagellar biosynthesis protein"
FT                   /note="C1336_000020037 identified by Glimmer3 with a raw
FT                   score of 12.00. Gene function extrapolated from C8J_0057
FT                   (CP000814.1) after blastn alignment (99.26 percent identity
FT                   over a 270 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31743.1"
FT                   /translation="MGQLIHTFTVEDTEQIIPKVKEDYGDKALIITNKQIRPKTLNRNA
FT                   LYEVMVAIEESDYEEHLKKQGKSLPAKKSSPKPSSTSLAEEKIRSQIPQEDEDVVLDFS
FT                   NTRLNRNLNTVKNNDLTKKTYQDFLQNKINPHQNKTLDFDDFKEKLSEVSNEISKVTNT
FT                   PLENYTPNLNYNKKIENFEKQFEKQINKLNDKIDLLADMMWDDKAEARKNLMIPPEFAS
FT                   IYKQAKESGMLENHLEAIMKATIENMPAAMKTNKDAVQRYFHSLLRNILPCRVESDIKK
FT                   QKIMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGIITLDTYRIGAVEQLFQYAKMMKL
FT                   PIIDSIEPKDLDEAIKSLNNCEVILVDTIGNSQYDQSKLSKTKEFLMHSNAEIDVNLVV
FT                   SANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLIYETNIPLSFFSTGQEVP
FT                   DDLEVANSDFLVHCILEGFNKGKNNE"
FT   gene            complement(117569..118042)
FT                   /locus_tag="C1336_000020038"
FT                   /note="C1336_000020038 identified by Glimmer3 with a raw
FT                   score of 8.14."
FT   CDS             complement(117569..118042)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020038"
FT                   /product="putative
FT                   2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
FT                   pyrophosphokinase"
FT                   /note="C1336_000020038 identified by Glimmer3 with a raw
FT                   score of 8.14. Gene function extrapolated from C8J_0058
FT                   (CP000814.1) after blastn alignment (99.04 percent identity
FT                   over a 417 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31744.1"
FT                   /translation="MLKIQGVKHFEKSRFFPFFSQNIRSFKYLALIGLGSNIEPEKKRF
FT                   DMLFRVMMDDKRFKILSTSPMLINEAFGFKEQKDFTNAVMLIQTNLHARALLKVLLYYE
FT                   VKFKRKRTFKNAPRTLDLDLLYFSQKVKRDKWCEVPHKGAKERVSVILPLGMI"
FT   gene            complement(118045..118524)
FT                   /locus_tag="C1336_000020039"
FT                   /note="C1336_000020039 identified by Glimmer3 with a raw
FT                   score of 9.60."
FT   CDS             complement(118045..118524)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020039"
FT                   /product="3-dehydroquinate dehydratase"
FT                   /note="C1336_000020039 identified by Glimmer3 with a raw
FT                   score of 9.60. Gene function extrapolated from Cj0066c
FT                   (AL111168.1) after blastn alignment (95.83 percent identity
FT                   over a 480 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31745.1"
FT                   /translation="MKIMIIQGPNVNMLGVREVGIYGAMKMEQIHEQMKIAATQSNVEL
FT                   DFFQSNFEGEIVDKIQECLGTVDGIIINAAGYTHTSIAIRDAIAAVALPTIEVHISNVY
FT                   RREEFRQKSLIAPVCSGTIVGFGPFGYHLALMGVIQICEQIKNLHAMQQAQQTNK"
FT   gene            118615..119844
FT                   /locus_tag="C1336_000020040"
FT                   /note="C1336_000020040 identified by Glimmer3 with a raw
FT                   score of 9.05."
FT   CDS             118615..119844
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020040"
FT                   /product="chlorohydrolase"
FT                   /note="C1336_000020040 identified by Glimmer3 with a raw
FT                   score of 9.05. Gene function extrapolated from C8J_0060
FT                   (CP000814.1) after blastn alignment (97.86 percent identity
FT                   over a 327 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31746.1"
FT                   /translation="MFIAAARYLFLCDEDFTILENQAFVFEDKILELGKLDNLRKKYPK
FT                   AKIIKTPKNSVILPTFINPHTHLEFSANSTTLHFGEFLIWLKSVINSRSMLNAQAKEEL
FT                   ILQSIKKMQKSGIGTIGEISSFGSDLDPCLKASQKGMRVVFFNEILGTNENQFEDKKQE
FT                   FLKRFENSLKFKNDFFIPAISIHSPYSTHPSLAHFALDLAKKQNLLVSTHFLESKAENI
FT                   WLRESKGGFKKWLENFTLHPKPLYTAKDFAKLFKGVRTLFTHCVYLKEYEWLDKNLHSI
FT                   THCAFSNRLLSQKSLDLKTALKSGLNIHLGTDGLSSNISLSLLDEMRANLLIHKNFDLL
FT                   ELASKLLQMVTLYPARALNLNLGELKKGKIADFSVFELGECDKKQAPLQFILNAKEVNK
FT                   LFIKGKECRF"
FT   gene            119832..120728
FT                   /locus_tag="C1336_000020041"
FT                   /note="C1336_000020041 identified by Glimmer3 with a raw
FT                   score of 14.70."
FT   CDS             119832..120728
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020041"
FT                   /product="signal peptide peptidase SppA, 36K type"
FT                   /note="C1336_000020041 identified by Glimmer3 with a raw
FT                   score of 14.70. Gene function extrapolated from C8J_0061
FT                   (CP000814.1) after blastn alignment (97.77 percent identity
FT                   over a 897 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31747.1"
FT                   /translation="MQILKSFFKALGCGIKFINTYFKTFVLLLIVIWILMPSANSSSNL
FT                   ANLERIDLKGEIFDSSAVLEKIINTKNDSNIKGVLFVIDSPGGAFAPSMELALAIKDLK
FT                   IKKPVLVYASGTMASGSYLAGVGANKILANPASFIGSIGVIMQGADLSGLANKLGIKEQ
FT                   TIQAGEFKSAGTFARAWNENERNFLQGLIDQSYDLFTGFVAKERALDLNKKDQWANARV
FT                   FLAAKAKELGLIDELSNYENAKKELEKLANVSNPVWKEENKIDKFLNRLEGQASNLISK
FT                   SLIEIAYKTNSSFINAR"
FT   gene            120807..121838
FT                   /locus_tag="C1336_000020042"
FT                   /note="C1336_000020042 identified by Glimmer3 with a raw
FT                   score of 14.72."
FT   CDS             120807..121838
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020042"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020042 identified by Glimmer3 with a raw
FT                   score of 14.72. Gene function extrapolated from Cj0069
FT                   (AL111168.1) after blastn alignment (98.41 percent identity
FT                   over a 1008 bp alignment). Similar to Cj0069."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31748.1"
FT                   /translation="MKKNIVFFEVKGGSDKGEDGYRKDTIPMVNALKAKGWNAEVIFFE
FT                   VSKKDEIYKYVKENFDGYVSRINPGNLKEENEYFDMLRKLCADKLVGMPHPDAMIGYGA
FT                   KDALTKLADTDLVPSDTYAYYDIKTFKENFPKSLAKGERVLKQNRGSTGEGIWRVSVEG
FT                   NVSGDSLPLNTKIKCTEAKDNHVEHRELGEFMDFCEQYIIGDNGMLVDMTFLPRIKEGE
FT                   IRLLMLYNTPVNVVHKKPAEDADAFSATLFSGAKYRYDKPEDWKTLVDMFLGELPKVRE
FT                   RLGNYDLPLIWTADFILDTDEKGNDKYVLGEINCSCVGFTSHLELADEVASNIINIVSK
FT                   TKA"
FT   gene            121851..121973
FT                   /locus_tag="C1336_000020043"
FT                   /note="C1336_000020043 identified by Glimmer3 with a raw
FT                   score of 2.54."
FT   CDS             121851..121973
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020043"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020043 identified by Glimmer3 with a raw
FT                   score of 2.54. Gene function extrapolated from C8J_0063
FT                   (CP000814.1) after blastn alignment (97.56 percent identity
FT                   over a 123 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31749.1"
FT                   /translation="MSILLLKNGHSFSIVFKFELYSIGKKISQNEHFVSLVSIG"
FT   gene            complement(122145..122282)
FT                   /locus_tag="C1336_000020044"
FT                   /note="C1336_000020044 identified by Glimmer3 with a raw
FT                   score of 10.31."
FT   CDS             complement(122145..122282)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020044"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020044 identified by Glimmer3 with a raw
FT                   score of 10.31. Gene function extrapolated from C8J_0064
FT                   (CP000814.1) after blastn alignment (98.53 percent identity
FT                   over a 136 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31750.1"
FT                   /translation="MGEVSFEEVKEEKDDENAVYLYTCECVGQMHDVPFGIHQKFNLRV
FT                   "
FT   gene            complement(122263..122430)
FT                   /locus_tag="C1336_000020045"
FT                   /note="C1336_000020045 identified by Glimmer3 with a raw
FT                   score of 7.90."
FT   CDS             complement(122263..122430)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020045"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020045 identified by Glimmer3 with a raw
FT                   score of 7.90. Gene function extrapolated from C8J_0064
FT                   (CP000814.1) after blastn alignment (95.03 percent identity
FT                   over a 161 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31751.1"
FT                   /translation="MSYLIQNIKTTNDLKEKLYTVSKKLLLEHILYEDMKVEQYRRSSL
FT                   ASEDDGGGKL"
FT   gene            complement(122512..122646)
FT                   /locus_tag="C1336_000020046"
FT                   /note="C1336_000020046 identified by Glimmer3 with a raw
FT                   score of 10.44."
FT   CDS             complement(122512..122646)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020046"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020046 identified by Glimmer3 with a raw
FT                   score of 10.44. Gene function extrapolated from C8J_0065
FT                   (CP000814.1) after blastn alignment (95.56 percent identity
FT                   over a 135 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31752.1"
FT                   /translation="MIDIQHQKLFELAAKIENMVYKFVQRDELKEILIKLFNYNKRTF"
FT   gene            complement(122871..123527)
FT                   /locus_tag="C1336_000020047"
FT                   /note="C1336_000020047 identified by Glimmer3 with a raw
FT                   score of 13.56."
FT   CDS             complement(122871..123527)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020047"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020047 identified by Glimmer3 with a raw
FT                   score of 13.56. Gene function extrapolated from
FT                   CJJ81176_0110 (CP000538.1) after blastn alignment (99.10
FT                   percent identity over a 111 bp alignment) - for clarity,
FT                   the original product name 'conserved domain protein' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31753.1"
FT                   /translation="MSKIDEISSKSKASILEHLKKAYKETTFTRIESIDPVEHIQTTQD
FT                   MLAEMKQKMNDNKYIVENATKNTLEEKINEIITKYGFKSMIYGAELNLNLEQIKAEKKI
FT                   CFDKEIENLRSEVFHSDFSIIHARAGVSSHGVALVPSSKTQPRMLSLAPKLCIVLLKKE
FT                   NVVKSLSEALNLVKKENEILPTNILFIAGPSRTADIELITIFGVHGPQIAHIIIY"
FT   gene            complement(123520..124959)
FT                   /locus_tag="C1336_000020048"
FT                   /note="C1336_000020048 identified by Glimmer3 with a raw
FT                   score of 13.95."
FT   CDS             complement(123520..124959)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020048"
FT                   /product="iron-sulfur cluster binding protein"
FT                   /note="C1336_000020048 identified by Glimmer3 with a raw
FT                   score of 13.95. Gene function extrapolated from C8J_0067
FT                   (CP000814.1) after blastn alignment (98.12 percent identity
FT                   over a 1440 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31754.1"
FT                   /translation="MSQKIPHEQIVQIKLNDKQMQENLMTAMHTLQKNRLNVIDARFKD
FT                   WQGLRAKAKQAKNNALMSLEERLLEFEKNATKNGIKVHWASSDEDACEIVYEIMKEKNI
FT                   TKLLKGKSMASEEIGLNHYLEKKGLKAIETDLGELILQLNEEPPLHIVVPAIHRNRHEI
FT                   GEIFKEKLGANLENNEPESLNAVAREHLRKDFEGLKLGLSGVNFAMSREGAFWLIENEG
FT                   NGRMCTTAPDIHIALCGIEKVMESFEDAATMVSLLTPSATGQFIPTYNNIITGPRKNGD
FT                   LDGPKEVHVILFDHNRSKMLAHEDYYEALRCIRCGACMNFCPVYDQIGGHAYQTTYPGP
FT                   IGEVISPNIFGIDHTGDILNFCSLCGRCSEVCPVQIPLADLIRKLRCDKIGQGKNPPLG
FT                   ANNVHRNALEAFAFKQFKNIATNGNKWRFSLSKAHYFNWTVQNFASVLPVIKKWHAFKE
FT                   LPQIKMDLYKEVQKLEGVSYE"
FT   gene            complement(124956..125693)
FT                   /locus_tag="C1336_000020049"
FT                   /note="C1336_000020049 identified by Glimmer3 with a raw
FT                   score of 12.39."
FT   CDS             complement(124956..125693)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020049"
FT                   /product="cysteine-rich domain protein"
FT                   /note="C1336_000020049 identified by Glimmer3 with a raw
FT                   score of 12.39. Gene function extrapolated from C8J_0068
FT                   (CP000814.1) after blastn alignment (97.44 percent identity
FT                   over a 430 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31755.1"
FT                   /translation="MKKVYFYATCLGSAAMQQSVLNAIKLLRREGIEVIFKKNQTCCAQ
FT                   PSFNSGYFNESREIALYNIDLFDKDYPIVVPSGSCAGMMSHDYQELFKNRPEFSKVKDF
FT                   SSRVIELSQYLDEVLKVDYEDKGAPIKVTWHSNCHALRVQKSIQASKNLIKKLKNVDLV
FT                   ELQYEEECCGFGGTFSIKEPEISNAMVRSKIKDIQNSGAKYLISGDGGCLLNIDGTMKR
FT                   MGLDIKGIHLYDFLLKRLEGERL"
FT   gene            complement(125817..127499)
FT                   /locus_tag="C1336_000020050"
FT                   /note="C1336_000020050 identified by Glimmer3 with a raw
FT                   score of 13.76."
FT   CDS             complement(125817..127499)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020050"
FT                   /product="L-lactate permease"
FT                   /note="C1336_000020050 identified by Glimmer3 with a raw
FT                   score of 13.76. Gene function extrapolated from Cj0076c
FT                   (AL111168.1) after blastn alignment (96.61 percent identity
FT                   over a 1532 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31756.1"
FT                   /translation="MEQILTWQQVYDPFSNIWLSALVAFLPILCFLVCLVVLKLKGYQA
FT                   GFLTVILATLVALFAYKMPWNLVGASFIQGFTNGMWPIAWIIIAAIFLYKLSIKSGSFE
FT                   IIKKSVMSITPDHRIQVILIGFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLQAAGLC
FT                   LIANTAPVAFGAVGIPIIAMANLVGIEQHSVSAMVGRMLVPLSLTIPFFIVFLMDGFKG
FT                   VKETFPAILVAALSFTTTQFLSSNHLGAELPDIISAVVSLAVTTVFLKFWKPKNIFRFD
FT                   NESNFTQDNTLSFNQILKAWSPFILLIVCIIIWTQPWFKALFDKDGILSYTSITLQFSN
FT                   ITTGILSPSITGIGETKPLSLALGIDLINGKTVAQAGTAILLAAFLSIAILKIKAEDAA
FT                   ECFWTTLKEMAIPCITIGLVVAFAFISKNSGMSTTLGLAFAHTGDAFSFFSPIIGWIGV
FT                   FLTGSDTSANLLFGTLQQVSAQKLGVSEALFLAANSVGGVVGKMISPQSIAIACAAVGL
FT                   VGKESDLFKFTLKYSVAFIILIGIWTYIIAFFLQGIIPEVIVK"
FT   gene            complement(127818..128237)
FT                   /locus_tag="C1336_000020051"
FT                   /note="C1336_000020051 identified by Glimmer3 with a raw
FT                   score of 12.32."
FT   CDS             complement(127818..128237)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020051"
FT                   /product="cytolethal distending toxin"
FT                   /note="C1336_000020051 identified by Glimmer3 with a raw
FT                   score of 12.32. Gene function extrapolated from C8J_0070
FT                   (CP000814.1) after blastn alignment (96.29 percent identity
FT                   over a 404 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31757.1"
FT                   /translation="MKKIVALFFMFITLAFATPTGDLKDFTEMVSIGSLETGIFLSAFR
FT                   DISKDPIDQNWNIKEIVLSNELKQKDKLADELPFGYVQFTNPKESDLCLAILEDGTFGA
FT                   KSCQDNLKDSKLETVFSMNANNNFSCANSFFSFGI"
FT   gene            complement(128264..128410)
FT                   /locus_tag="C1336_000020052"
FT                   /note="C1336_000020052 identified by Glimmer3 with a raw
FT                   score of 9.03."
FT   CDS             complement(128264..128410)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020052"
FT                   /product="cytolethal distending toxin, type I
FT                   deoxyribonuclease-like protein"
FT                   /note="C1336_000020052 identified by Glimmer3 with a raw
FT                   score of 9.03. Gene function extrapolated from C8J_0071
FT                   (CP000814.1) after blastn alignment (93.28 percent identity
FT                   over a 134 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31758.1"
FT                   /translation="MVFPTSATQANGGALDYTITGNLNRQQAYTPPLLAVILMLASLRS
FT                   FSS"
FT   gene            complement(128874..129062)
FT                   /locus_tag="C1336_000020053"
FT                   /note="C1336_000020053 identified by Glimmer3 with a raw
FT                   score of 7.43."
FT   CDS             complement(128874..129062)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020053"
FT                   /product="cytolethal distending toxin"
FT                   /note="C1336_000020053 identified by Glimmer3 with a raw
FT                   score of 7.43. Gene function extrapolated from C8J_0072
FT                   (CP000814.1) after blastn alignment (91.35 percent identity
FT                   over a 185 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31759.1"
FT                   /translation="MNVLLNFENVNPLGRSFGEFEDTNSFSLKLGLEPIFPTNQEIPSL
FT                   ISNADLALITPIYPTFN"
FT   gene            129014..129157
FT                   /locus_tag="C1336_000020054"
FT                   /note="C1336_000020054 identified by Glimmer3 with a raw
FT                   score of 1.77."
FT   CDS             129014..129157
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020054"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020054 identified by Glimmer3 with a raw
FT                   score of 1.77. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31760.1"
FT                   /translation="MNAPKDLHFQNLEEHSLKKKIIKKIKTLIFCIKNLDYVFKFFKKI
FT                   IT"
FT   gene            129222..129455
FT                   /locus_tag="C1336_000020055"
FT                   /note="C1336_000020055 identified by Glimmer3 with a raw
FT                   score of 9.89."
FT   CDS             129222..129455
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020055"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020055 identified by Glimmer3 with a raw
FT                   score of 9.89. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31761.1"
FT                   /translation="MHLKHLYFSISQIFNFYKEGFKNLTLGKTLWKIIFIKLFVMFVIL
FT                   KLFVFDVNFNSIFKSDKEKSTFVLKNLTLEGK"
FT   gene            129456..131018
FT                   /locus_tag="C1336_000020056"
FT                   /note="C1336_000020056 identified by Glimmer3 with a raw
FT                   score of 12.67."
FT   CDS             129456..131018
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020056"
FT                   /product="cytochrome d ubiquinol oxidase, subunit I"
FT                   /note="C1336_000020056 identified by Glimmer3 with a raw
FT                   score of 12.67. Gene function extrapolated from C8J_0074
FT                   (CP000814.1) after blastn alignment (99.70 percent identity
FT                   over a 336 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31762.1"
FT                   /translation="MNELNSVDWSRAQFALTALYHFLFVPLTLGLSFIIAIMETIYVKT
FT                   KNERWKKITKFWLSLFAINFAIGVATGIIMEFEFGTNWANYSWFVGDIFGAPLAIEGIM
FT                   AFFLEATFFAVMFFGWDKVSKGFHLLSTWCVAIGSNLSAFWILVANGWMQYPVGMSFNP
FT                   DIARNEMQSFFEVALSPVAISKFLHTIGSGYVISALFVIGISAWFMLKGRHIIEAKKSL
FT                   VVGASFGLVCSIFLFFSGDESAYRVTQTQPMKLAAMEGVYQGEHRAGLVPFGILNPKKT
FT                   IDNNESVFLFDITIPYALSILGNRDPNSFVPGIEDLIYGNESKGIEPMQNRIDRGKIAI
FT                   QALKDYKLAKENNDTIAMANHKSILETHFKDFGYGYLEKPSDTIPPVALTFYSFHIMVA
FT                   LGSFFFLLFIVTLYLTMANDIEKFRKVLWVCLLSIPLGYIAAEAGWIVAEVGRQPWAIQ
FT                   DLLPVHIAATQLGKVNVQISFWIFAVLFTALLIAEVKIILTQIKKGFDAHAGHTPLMGK
FT                   GEK"
FT   gene            131018..132142
FT                   /locus_tag="C1336_000020057"
FT                   /note="C1336_000020057 identified by Glimmer3 with a raw
FT                   score of 14.49."
FT   CDS             131018..132142
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020057"
FT                   /product="cytochrome bd oxidase subunit II"
FT                   /note="C1336_000020057 identified by Glimmer3 with a raw
FT                   score of 14.49. Gene function extrapolated from C8J_0075
FT                   (CP000814.1) after blastn alignment (99.31 percent identity
FT                   over a 145 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31763.1"
FT                   /translation="MFFGLELEGLQIYWWLILSLLGGLLVFMFFVQGGQTLIDELSKDE
FT                   LEKTMLVNSLGRKWELGFTTLVLFGGAAFAAFPLFYSTSFGGAYWAWLCILFCFILQAV
FT                   AYEYRKKENNVYGSKTYEIFLKINGYLGVFLIGVAVSSFFSGSEFILNEHNFVSWQNPL
FT                   HGLELLLNPFNYLLGLALVFLARLLGAAYFMNNINDENIKIRAMKKLMINSILFLPFFL
FT                   GFLAWIFLKDGFSVDANGTVSMSANLYLYNFLNQMIFAILLAIGVILVLLGMIQGAKGC
FT                   SKAIFTLGLGTVLTVFALLSSIGLGQSAFYPSLSDLQSSLTLKNASSSYYTLSVMAYVS
FT                   LLVPFVLAYIIYVWNAMDKVKITREEIANDDHAY"
FT   gene            complement(132336..133031)
FT                   /locus_tag="C1336_000020058"
FT                   /note="C1336_000020058 identified by Glimmer3 with a raw
FT                   score of 12.91."
FT   CDS             complement(132336..133031)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020058"
FT                   /product="putative amino acid recemase"
FT                   /note="C1336_000020058 identified by Glimmer3 with a raw
FT                   score of 12.91. Gene function extrapolated from C8J_0077
FT                   (CP000814.1) after blastn alignment (99.60 percent identity
FT                   over a 500 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31764.1"
FT                   /translation="MKTIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNF
FT                   EEIENLQSQDKWQEAAQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHI
FT                   AKSSAKALKQENIQKIGLLGTKYTMTQDFYKKILIEENISVITPSDEDIKIVNDIIFNE
FT                   LCKGKIKQDSKEKYLNIIKKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLIHALD
FT                   AANEALKDL"
FT   gene            complement(133151..133846)
FT                   /locus_tag="C1336_000020059"
FT                   /note="C1336_000020059 identified by Glimmer3 with a raw
FT                   score of 11.77."
FT   CDS             complement(133151..133846)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020059"
FT                   /product="uracil-DNA glycosylase"
FT                   /note="C1336_000020059 identified by Glimmer3 with a raw
FT                   score of 11.77. Gene function extrapolated from
FT                   CJJ81176_0121 (CP000538.1) after blastn alignment (98.13
FT                   percent identity over a 696 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31765.1"
FT                   /translation="MEEITINIDKIKINDDWKEFLRDEFQKKYFLEIKKQYLNAIDQNI
FT                   IIYPPANLIFNAFNLCPLKEIKIIILGQDPYHQPNQAMGLSFSVPKNVKIPPSLNNIFK
FT                   ELQNDLNITPTKSGDLSSWAKQGVLLLNSILSVEASKAASHSSWGWQEFSDAIIHKLSN
FT                   EKSGLVFMLWGNYAKSKEILIDNTKHLILKAAHPSPLARTGFLGCKHFSKANEFLKKVG
FT                   KIPVDWKIV"
FT   gene            134122..135528
FT                   /locus_tag="C1336_000020060"
FT                   /note="C1336_000020060 identified by Glimmer3 with a raw
FT                   score of 12.86."
FT   CDS             134122..135528
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020060"
FT                   /product="aspartate ammonia-lyase"
FT                   /note="C1336_000020060 identified by Glimmer3 with a raw
FT                   score of 12.86. Gene function extrapolated from CJE0082
FT                   (CP000025.1) after blastn alignment (99.15 percent identity
FT                   over a 1407 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31766.1"
FT                   /translation="MGTRKEHDFIGELEISDEVYYGVQTFRAVENFDISHDRLKDFPRF
FT                   VRALARVKKAAAMANHELGLLDKNIQDAIIKACDKILEGGYYDQFVVDMIQGGAGTSTN
FT                   MNANEVIANIGLELMGHKKGEYQYLHPNDHVNLSQSTNDAYPTALHLALHDYLSDLAKA
FT                   MEHLKKAYERKAEEFKDVLKMGRTQLQDAVPMTLGREFKTFAVMIGEDIQRVLEARKLI
FT                   LEINLGGTAIGTGINSHPDYPKVVERKIREVTGFEYTVAEDLIEATQDTGAYVQISGVL
FT                   KRVATKLSKVCNDLRLLSSGPKCGLNEINLPKMQPGSSIMPGKVNPVIPEVVNQVCYFV
FT                   IGADVTVTFACEGGQLQLNVFEPVAAYSLFNSIVMLEKAMYTLADKCIDGITANEKICS
FT                   DFVYNSVGIVTALNPYIGYENSASIAKEAMNTGKRVADIALERGLLSKEQIDEILTPSN
FT                   MLNPHMEAKK"
FT   gene            135545..136882
FT                   /locus_tag="C1336_000020061"
FT                   /note="C1336_000020061 identified by Glimmer3 with a raw
FT                   score of 15.33."
FT   CDS             135545..136882
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020061"
FT                   /product="anaerobic C4-dicarboxylate membrane transporter
FT                   DcuA"
FT                   /note="C1336_000020061 identified by Glimmer3 with a raw
FT                   score of 15.33. Gene function extrapolated from
FT                   CJJ81176_0123 (CP000538.1) after blastn alignment (98.95
FT                   percent identity over a 1329 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31767.1"
FT                   /translation="MDIMIILQVIVLLGAIFIGIRLGGIAIGYAGGLGVVILGLVLGMK
FT                   PGNIPWDVILIIAAAIAAISAMQQAGGLDYMVRVTEKILRSSPKFINYLAPACGWLLTI
FT                   LAGTGNAVFSLMPVVVDVAKSQNIKPSAPLSLMVVSSQIGITASPVSAAVVYMSGVLEP
FT                   LGWNYPTLIGIWISTTFIACMLTAFIVSLITPMDLSKDSVYQERLKAGLVKDAGAILHG
FT                   EDKPGAKLSVGIFLITVLAVVLYATAISSNIKWIDPVVVPRDAAIMSFLLTAATLITWL
FT                   CKVEPGKILDTSVFKSGMTACVCVFGVAWLGNTFVAGHEASIKEVAGDWVKQTPAMLAV
FT                   AFFFASMLLYSQAATAKAIVPVIITALGISAANPHDSYMLVACFAAVSALFVLPTYPTL
FT                   LGAVQMDDTGTTRIGKFIFNHSFFIPGVLAIAIAVALSFVLAPMLI"
FT   gene            136987..138348
FT                   /locus_tag="C1336_000020062"
FT                   /note="C1336_000020062 identified by Glimmer3 with a raw
FT                   score of 13.53."
FT   CDS             136987..138348
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020062"
FT                   /product="putative lipoprotein"
FT                   /note="C1336_000020062 identified by Glimmer3 with a raw
FT                   score of 13.53. Gene function extrapolated from C8J_0082
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 145 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31768.1"
FT                   /translation="MKIKVGLIFSGIVCLFLTACVNQVKQNTTFENALTQKYCGDDFFN
FT                   QNLEKIKKNDDVIYTGLNAGLIARNCGDFNKSNVFFDAAEESYKYDVDLENVGSKAAKF
FT                   VGTTLLNDTIVDYDGSLYERIMVNIYKALNYMEEDDYENARVEFNRALMRQDKAKEYFA
FT                   KEIEKNRADLDKAKEDKNYDKNMNENSKVIEEQYGNLFKEFDTTKNFINPYATYLASIF
FT                   FFMDKDYRKAADLFREVAIIYPKNKTIKKEAKIFKEYATKIKVKKAKKYVFVVYENGFG
FT                   VVKDEFALTLPFIVDKKIISTNIALQTLKKREASFANLNINGQNTNDFVNLDNIVATEF
FT                   KINMPAMIAKALAQTIIKTTLNVAVANNDSTGGWLSLATAVATAATNKADVRSWRGLPK
FT                   SIAIATIENDGNLEIKDPQGNILFQKSLDKNKNALVIVRSFAPYLPASVAIMEK"
FT   gene            138358..138726
FT                   /locus_tag="C1336_000020063"
FT                   /note="C1336_000020063 identified by Glimmer3 with a raw
FT                   score of 13.65."
FT   CDS             138358..138726
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020063"
FT                   /product="lipoprotein, putative"
FT                   /note="C1336_000020063 identified by Glimmer3 with a raw
FT                   score of 13.65. Gene function extrapolated from
FT                   CJJ81176_0125 (CP000538.1) after blastn alignment (98.33
FT                   percent identity over a 359 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31769.1"
FT                   /translation="MKKIILFILMFLLGACTPSYQIVSNQNTVILGSNLPKSLVKQFQK
FT                   RINSNGYLEFEVILRSTFAKDVIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVILRK
FT                   LASDTRAKDFRLEIKAKN"
FT   gene            138750..139373
FT                   /locus_tag="C1336_000020064"
FT                   /note="C1336_000020064 identified by Glimmer3 with a raw
FT                   score of 14.61."
FT   CDS             138750..139373
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020064"
FT                   /product="putative lipoprotein"
FT                   /note="C1336_000020064 identified by Glimmer3 with a raw
FT                   score of 14.61. Gene function extrapolated from Cj0091
FT                   (AL111168.1) after blastn alignment (99.84 percent identity
FT                   over a 608 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31770.1"
FT                   /translation="MKKTKILGTALIGALLFSGCAQTAYTDGKASQVKKGDALTLGLDR
FT                   QDFESAAETMINSMLSDPAFANIKPGTRKVIAIGRVVNDTPQRIDTEKLTAKITSALRK
FT                   SGKFVLTSAVAAGGALDSMSEDVRELRDNDEFNQKTIAKKGTLVSPDFSLAGKIRQDNV
FT                   KLSNGKTQVEYFFLLRLTDLTSGLVYWEDEQTIDKTGSSKSVTW"
FT   gene            139455..140801
FT                   /locus_tag="C1336_000020065"
FT                   /note="C1336_000020065 identified by Glimmer3 with a raw
FT                   score of 12.45."
FT   CDS             139455..140801
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020065"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020065 identified by Glimmer3 with a raw
FT                   score of 12.45. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31771.1"
FT                   /translation="MKKILFIGSLVMASLLYAQGSQPVEITQEDIKAQNEISTIKEEKT
FT                   IQNKDVKEYFDEFSEANGITYGETIEGKTFYNGYADITDKSDLARGGSIAFQKAMLNIQ
FT                   AEFIKDAFGRLANQRITKYLSDDSSNAREFEDLPKGGTLSQIMDKVTQLAGAKLDKALQ
FT                   DLGINVQGLSEERKKELFKDEFLTKTLVQAYGAMSGLVPVQTFVTTTKRGNYRIGVIAV
FT                   MSDKTRMFADDIQKNRAPSIKGGGKALKEFLPKTEKGFISEYGIRMVYDEKGQPMIISY
FT                   GIWGYGKNSTDSRILDRLESRAQEQASIQADVAIREFVTTQINLRDESQIGDVLKQNIK
FT                   QSTNINDGAKEITEDIISEIVDKSMKTISTSTKGNIRGIRTVKRWSYTDENGQEYVGAV
FT                   RVYSYTNYVNTTQAVSPIKQQQNTNTNTIKKSSSIGDRKSQMVNSLDDF"
FT   gene            140811..142013
FT                   /locus_tag="C1336_000020066"
FT                   /note="C1336_000020066 identified by Glimmer3 with a raw
FT                   score of 14.62."
FT   CDS             140811..142013
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020066"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000020066 identified by Glimmer3 with a raw
FT                   score of 14.62. Gene function extrapolated from C8J_0086
FT                   (CP000814.1) after blastn alignment (97.92 percent identity
FT                   over a 1203 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31772.1"
FT                   /translation="MKIIKILFLGLFLSLSLNAKVVTTTSTKSSTGEGTGLTREDAINN
FT                   AIIEAIGKMSGVSINSLKKSNTSVSTDNSGSNIQDNYSEQISKATKGRADTYEINSVEQ
FT                   DANGKYTANVTIFKTTTTKKYQAPGLSADNRRSITVFDSTPDAAKRGIGSALQQKIISD
FT                   LLQSRKFNVLDRDSSGYYEMEKALIKSGDAASDEVYKLKNVLATDYILLFSISGLEGKQ
FT                   KTSNLTGKSKTEIEVIVDYRVLLFATRQIKFSNTLSMKVNLKDNSLSANETALKQIANR
FT                   IAGDILNAIYPLKVASVENNEVVFSQSLNQGDIYECFALGKVIKDAYTKENTGRVESKT
FT                   GSIEITRTSPKLSYAKITEGSVKVGDICRPLIGSNSGNGYTIGRDANYETQEGGGVNLG
FT                   F"
FT   gene            142172..142480
FT                   /locus_tag="C1336_000020067"
FT                   /note="C1336_000020067 identified by Glimmer3 with a raw
FT                   score of 11.46."
FT   CDS             142172..142480
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020067"
FT                   /product="50S ribosomal protein L21"
FT                   /note="C1336_000020067 identified by Glimmer3 with a raw
FT                   score of 11.46. Gene function extrapolated from C8J_0087
FT                   (CP000814.1) after blastn alignment (99.68 percent identity
FT                   over a 309 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31773.1"
FT                   /translation="MYAIIKHSGKQYKVSVGDELKLDHFEAESKASIEVSEVLAINDKE
FT                   LKVGAPFVAGAKVVLEVINHGKDKKVVIYKKRRRKDSKLKRGFRRQFTRVVVKDIKA"
FT   gene            142491..142745
FT                   /locus_tag="C1336_000020068"
FT                   /note="C1336_000020068 identified by Glimmer3 with a raw
FT                   score of 10.58."
FT   CDS             142491..142745
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020068"
FT                   /product="50S ribosomal protein L27"
FT                   /note="C1336_000020068 identified by Glimmer3 with a raw
FT                   score of 10.58. Gene function extrapolated from C8J_0088
FT                   (CP000814.1) after blastn alignment (99.22 percent identity
FT                   over a 255 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31774.1"
FT                   /translation="MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTAT
FT                   HAGNNVGMGKDHTIFALIDGFVKFERKDKDRKKVSVYPA"
FT   gene            142852..143889
FT                   /locus_tag="C1336_000020069"
FT                   /note="C1336_000020069 identified by Glimmer3 with a raw
FT                   score of 11.68."
FT   CDS             142852..143889
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020069"
FT                   /product="GTP-binding protein, GTP1/Obg family"
FT                   /note="C1336_000020069 identified by Glimmer3 with a raw
FT                   score of 11.68. Gene function extrapolated from C8J_0089
FT                   (CP000814.1) after blastn alignment (98.07 percent identity
FT                   over a 1038 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31775.1"
FT                   /translation="MFIDSVKITLASGDGGKGAVSFRREKHVPLGGPDGGDGGNGGDII
FT                   FVCDNNTHTLVNFKGKRELRAQNGAGGMGRNKNGKKGENLELIVPEGTQVIDAQTNEIL
FT                   LDLTKEGQKELFLKGGKGGLGNTHFKHATNQRPDYAQPGIKGESRLVRLELKLIADVGL
FT                   VGFPNVGKSTLISVVSNAKPEIANYEFTTLTPKLGLVDVDEYNSFVMADIPGIIEGASG
FT                   GKGLGLAFLKHIERTSFLLFVLDPMREMPLKEQFIVLRKELEKFSNELFGRKFGIMISK
FT                   SDSVNLGEEFAEQIALNINELENYLKEINNPQSFLIKVSSLEKTGLKELKFMLLEEIKT
FT                   LRNNK"
FT   gene            144012..144767
FT                   /locus_tag="C1336_000020070"
FT                   /note="C1336_000020070 identified by Glimmer3 with a raw
FT                   score of 15.69."
FT   CDS             144012..144767
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020070"
FT                   /product="glutamate 5-kinase"
FT                   /note="C1336_000020070 identified by Glimmer3 with a raw
FT                   score of 15.69. Gene function extrapolated from
FT                   CJJ81176_0132 (CP000538.1) after blastn alignment (98.41
FT                   percent identity over a 756 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31776.1"
FT                   /translation="MKRIVVKVGSHVISEENILSFERLKNLVAFLAKLMEKYEVILVTS
FT                   AAISAGHTKLDIDRKNLINKQVLAAIGQPFLISVYNELLAKFNKLGGQILLTGKDFDSR
FT                   KATKHAKNAIDMMINLGILPIINENDATAIEEIVFGDNDSLSAYATHFFDADLLVILSD
FT                   IDGFYDKNPSEFSDVKRLEKITHIKEEWLQATIKTGSEHGTGGIVTKLKAAKFLLEHNK
FT                   KMFLASGFDLSAAKTFLLEDKQIGGTLFE"
FT   gene            144841..145758
FT                   /locus_tag="C1336_000020071"
FT                   /note="C1336_000020071 identified by Glimmer3 with a raw
FT                   score of 11.94."
FT   CDS             144841..145758
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020071"
FT                   /product="methionyl-tRNA formyltransferase"
FT                   /note="C1336_000020071 identified by Glimmer3 with a raw
FT                   score of 11.94. Gene function extrapolated from
FT                   CJJ81176_0133 (CP000538.1) after blastn alignment (99.01
FT                   percent identity over a 303 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31777.1"
FT                   /translation="MKKIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVGRKQIL
FT                   TPSDTKAFLSQNYPSIPIFTPSSLKDENIIREIKDLNPDFIVVAAYGKILPKAILDLAP
FT                   CVNLHASLLPKYRGASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDKNSS
FT                   EVFELLANLAAKLILSTLLNFDKITPKKQEESLATLCRKIKKEDGLINLQNARELYQKY
FT                   LAFTPWPGVFLENGLKFLELELVDELKQNARMGEILELEKESFLLACKQGVLRIKKLQE
FT                   SGKKVLDGRTYLNGKRLKSEDSLC"
FT   gene            145721..146374
FT                   /locus_tag="C1336_000020072"
FT                   /note="C1336_000020072 identified by Glimmer3 with a raw
FT                   score of 9.43."
FT   CDS             145721..146374
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020072"
FT                   /product="biotin--acetyl-CoA-carboxylase ligase"
FT                   /note="C1336_000020072 identified by Glimmer3 with a raw
FT                   score of 9.43. Gene function extrapolated from CJE0094
FT                   (CP000025.1) after blastn alignment (98.62 percent identity
FT                   over a 654 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31778.1"
FT                   /translation="MEKGLKVKIVCVESIDSTHLFLCEQIRNGKIDGNFAIYALEQTNG
FT                   VGSRENSWQSSKGNLHLSFCIKEEDLPKDLPLASVSIYFAYLLKEVLQEKGSKIWLKWP
FT                   NDLYLDDKKAGGVISAKISNFIIGGMGLNLKFSPQNTALCDIEISLKDLVSEFLQKVEK
FT                   KFLWKNIFSKYMLEFEKSRKFSVHHEGKVFSLENSFLYEDGSILLGDKRVYSLR"
FT   gene            146371..147156
FT                   /locus_tag="C1336_000020073"
FT                   /note="C1336_000020073 identified by Glimmer3 with a raw
FT                   score of 12.86."
FT   CDS             146371..147156
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020073"
FT                   /product="chromosome partitioning protein, ParA family"
FT                   /note="C1336_000020073 identified by Glimmer3 with a raw
FT                   score of 12.86. Gene function extrapolated from CJE0095
FT                   (CP000025.1) after blastn alignment (99.49 percent identity
FT                   over a 786 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31779.1"
FT                   /translation="MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQANA
FT                   TTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGENN
FT                   EKKMLLKNQIQEVIDEYDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGVAMV
FT                   LNTIKIIKKTINSKLRVRGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNEDDFIV
FT                   IPRNVKLAESPSFGKPIILYDIKSPGSVAYQNLAYSILG"
FT   gene            147162..147998
FT                   /locus_tag="C1336_000020074"
FT                   /note="C1336_000020074 identified by Glimmer3 with a raw
FT                   score of 12.82."
FT   CDS             147162..147998
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020074"
FT                   /product="parB family protein"
FT                   /note="C1336_000020074 identified by Glimmer3 with a raw
FT                   score of 12.82. Gene function extrapolated from C8J_0094
FT                   (CP000814.1) after blastn alignment (99.69 percent identity
FT                   over a 646 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31780.1"
FT                   /translation="MGLNKDKGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPFQ
FT                   PRKNFDQEALDELANSIKEFGLIQPIIVFKKNNKFILIAGERRLRAVKALGKKEILAFI
FT                   ADIDENKLRELALIENIQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNT
FT                   LRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKI
FT                   KNNESLPNQEFEDEIKKLKQILNRFGFNCKNKNNDFVIHLENIDKIKKLIKMLEKL"
FT   gene            148059..148484
FT                   /locus_tag="C1336_000020075"
FT                   /note="C1336_000020075 identified by Glimmer3 with a raw
FT                   score of 15.69."
FT   CDS             148059..148484
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020075"
FT                   /product="ATP synthase F0, B' subunit"
FT                   /note="C1336_000020075 identified by Glimmer3 with a raw
FT                   score of 15.69. Gene function extrapolated from CJE0097
FT                   (CP000025.1) after blastn alignment (97.35 percent identity
FT                   over a 113 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31781.1"
FT                   /translation="MFEDMHPSIMLATMAIFLAMIVILNSMLYKPLLKFMDERNDSIEN
FT                   DENKVKENSQEVLDVNNELEAIHINTREEIQKIKQGAIATAKEEAEQILRSKKEELERK
FT                   MASFYADLAIQKQELQEHLNIHLPELKQALQNNIKRI"
FT   gene            148495..149007
FT                   /locus_tag="C1336_000020076"
FT                   /note="C1336_000020076 identified by Glimmer3 with a raw
FT                   score of 11.65."
FT   CDS             148495..149007
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020076"
FT                   /product="ATP synthase F0, B' subunit"
FT                   /note="C1336_000020076 identified by Glimmer3 with a raw
FT                   score of 11.65. Gene function extrapolated from
FT                   CJJ81176_0138 (CP000538.1) after blastn alignment (99.31
FT                   percent identity over a 144 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31782.1"
FT                   /translation="MSKLFFIIFLLPLYAFGASNVSGEYDIIPRTINFLIFVAILYYFV
FT                   ATPFKNFYKNRIVKISSKLDEIQKKLLESKAKKLDTMKKLEEAKANAAAALVTARKEAE
FT                   ILVQNIKKETQDELDLLQKHFEEQKDYEFRKMEKELVSNTLNEIFSDPNMTLKQSEIIE
FT                   LMMKKVS"
FT   gene            149010..149531
FT                   /locus_tag="C1336_000020077"
FT                   /note="C1336_000020077 identified by Glimmer3 with a raw
FT                   score of 12.64."
FT   CDS             149010..149531
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020077"
FT                   /product="ATP synthase F1, delta subunit"
FT                   /note="C1336_000020077 identified by Glimmer3 with a raw
FT                   score of 12.64. Gene function extrapolated from
FT                   CJJ81176_0139 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 163 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31783.1"
FT                   /translation="MENIIARRYAKAIASRTDINDFYQNLCILNFAFVLPKFKNIIESN
FT                   EIKKERKMEFLDSFFDIKNSSFQNFLRLLIENSRLECIPQIVKELERQKAFKENIFVGI
FT                   VYSKEKLSQENLKDLEVKLNKKFDANIKLNNKISQDDSVKIELEELGYELSFSMKALQN
FT                   KLNEYILKII"
FT   gene            149545..151050
FT                   /locus_tag="C1336_000020078"
FT                   /note="C1336_000020078 identified by Glimmer3 with a raw
FT                   score of 10.21."
FT   CDS             149545..151050
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020078"
FT                   /product="ATP synthase F1 sector alpha subunit"
FT                   /note="C1336_000020078 identified by Glimmer3 with a raw
FT                   score of 10.21. Gene function extrapolated from C8J_0098
FT                   (CP000814.1) after blastn alignment (98.54 percent identity
FT                   over a 1506 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31784.1"
FT                   /translation="MKFKADEISSIIKERIENFDLNLEIEETGKIISVADGVAKVYGLK
FT                   NIMAGEMVEFENGDKGMALNLEESSVGIVILGKGEGLKEGASVKRLKKLLKVPVGEALI
FT                   GRVVNALGEPIDAKGVINANEYRFVEEKAKGIMARKSVHEPLHTGIKAIDALVPIGRGQ
FT                   RELIIGDRQTGKTTVAVDTIISQRGQGVICIYVAIGQKQSTVAQVVKRLEEHGAMGYTI
FT                   VVNAGASDPAALQYLAPYTGVTMGEFFRDNAKHALIVYDDLSKHAVAYREMSLILRRPP
FT                   GREAYPGDVFYLHSRLLERASKLNDELGAGSLTALPIIETQAGDVSAYIPTNVISITDG
FT                   QIFLETDLFNSGIRPAINVGLSVSRVGGAAQIKATKQVSGTLRLDLAQYRELQAFAQFA
FT                   SDLDEASRKQLERGQRMVELLKQPPYSPLSVEKQVVLIFAGTKGFLDDIAVSRIKEFED
FT                   GIYPFIEAKHPDIFEQIRSKKALDSDLEEKLAKAINEFKANHL"
FT   gene            151059..151943
FT                   /locus_tag="C1336_000020079"
FT                   /note="C1336_000020079 identified by Glimmer3 with a raw
FT                   score of 10.77."
FT   CDS             151059..151943
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020079"
FT                   /product="ATP synthase F1, gamma subunit"
FT                   /note="C1336_000020079 identified by Glimmer3 with a raw
FT                   score of 10.77. Gene function extrapolated from
FT                   JJD26997_0113 (CP000768.1) after blastn alignment (98.63
FT                   percent identity over a 731 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31785.1"
FT                   /translation="MSNLKEIKRKIKSVHNTQKTTNAMKLVSTAKLKKAEEAAKRSKIY
FT                   AQKIDEILSEISFQINKIVHNEDDVRLSLFHKKEQIKTVDLIFITADKGLCGGFNIKTL
FT                   KTVSEMLKEYEAKNINIRLRAIGKTGIEYFNFQKIELLEKYFHLSSSPDYEKACEVIHA
FT                   AVDDFLNGNTDEVILVHNGYKNMITQELKINHLIPVEPKSIEQTHNSLLELEPEGTELL
FT                   EDLMKTYFEYNMYYALIDSLAAEHSARMQAMDNATNNAKARVKQLNLAYNKARQESITT
FT                   ELIEIISGVESMK"
FT   gene            151968..153365
FT                   /locus_tag="C1336_000020080"
FT                   /note="C1336_000020080 identified by Glimmer3 with a raw
FT                   score of 13.67."
FT   CDS             151968..153365
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020080"
FT                   /product="ATP synthase F1 sector beta subunit"
FT                   /note="C1336_000020080 identified by Glimmer3 with a raw
FT                   score of 13.67. Gene function extrapolated from C8J_0100
FT                   (CP000814.1) after blastn alignment (99.28 percent identity
FT                   over a 1398 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31786.1"
FT                   /translation="MQGFISQVLGPVVDVDFNDYLPQINEAIVVNFESEGKKHKLVLEV
FT                   AAHLGDNRVRTIAMDMTDGLVRGLKAEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEI
FT                   PFDKKWAIHRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIM
FT                   ELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRI
FT                   ALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGK
FT                   FQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDP
FT                   LDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILGMDELSEEDKLVVERARK
FT                   IEKFLSQPFFVAEVFTGSPGKYISLEDTIAGFKGILEGKYDHLPENAFYMVGNIDEAIA
FT                   KADKLKG"
FT   gene            153369..153758
FT                   /locus_tag="C1336_000020081"
FT                   /note="C1336_000020081 identified by Glimmer3 with a raw
FT                   score of 14.86."
FT   CDS             153369..153758
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020081"
FT                   /product="ATP synthase F1, epsilon subunit"
FT                   /note="C1336_000020081 identified by Glimmer3 with a raw
FT                   score of 14.86. Gene function extrapolated from
FT                   CJJ81176_0143 (CP000538.1) after blastn alignment (98.46
FT                   percent identity over a 390 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31787.1"
FT                   /translation="MNDLINFEIVTPLGVIYQGEVKSVTLPGSEGEFGVLKGHAALVSS
FT                   LKSGVIDIEKADLNHELIAIDAGHAKVDEDKICVLAKGAVWVCGSDESEIEKNLAQAKD
FT                   LIKSMSSDNAALAATFSKLDNARMH"
FT   gene            153758..154312
FT                   /locus_tag="C1336_000020082"
FT                   /note="C1336_000020082 identified by Glimmer3 with a raw
FT                   score of 11.87."
FT   CDS             153758..154312
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020082"
FT                   /product="exbB/tolQ family transport protein"
FT                   /note="C1336_000020082 identified by Glimmer3 with a raw
FT                   score of 11.87. Gene function extrapolated from C8J_0102
FT                   (CP000814.1) after blastn alignment (98.88 percent identity
FT                   over a 447 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31788.1"
FT                   /translation="MNFEAIFHFFNSSSIITYIVLLWLSLYFILAFSILFARLTYLATW
FT                   RNKEKESLETLLLGEKDLSRTDSILRKCNDTTSNHLEIYKNLASRRASAGLTWLSIIAS
FT                   TSPFIGLFGTVISILETFGGLGTQNSLSIIAPKISEALVATGCGILVAIPAYTFHLIIK
FT                   RKAFELLSIIDSEIKVISSSK"
FT   gene            154321..154710
FT                   /locus_tag="C1336_000020083"
FT                   /note="C1336_000020083 identified by Glimmer3 with a raw
FT                   score of 12.25."
FT   CDS             154321..154710
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020083"
FT                   /product="TonB system transport protein ExbD, putative"
FT                   /note="C1336_000020083 identified by Glimmer3 with a raw
FT                   score of 12.25. Gene function extrapolated from C8J_0103
FT                   (CP000814.1) after blastn alignment (98.97 percent identity
FT                   over a 390 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31789.1"
FT                   /translation="MPFDDEKPELNITPLVDIMLVLLAILMVTAPSITYEEKINLPQGS
FT                   QKNTSSPTVKSLIISINAKKEIFLNQEKYDFISFADNLAQRKAQFNTEDPVFIRADKSL
FT                   KYDDVILVLRSVKNLGFNKVALQTE"
FT   gene            154713..155492
FT                   /locus_tag="C1336_000020084"
FT                   /note="C1336_000020084 identified by Glimmer3 with a raw
FT                   score of 13.15."
FT   CDS             154713..155492
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020084"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000020084 identified by Glimmer3 with a raw
FT                   score of 13.15. Gene function extrapolated from Cj0111
FT                   (AL111168.1) after blastn alignment (98.97 percent identity
FT                   over a 780 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31790.1"
FT                   /translation="MKNYGLSNLNSFLLALVIYISIVILVFFRLVSEVEPAIQYTDIKD
FT                   SFVDIELAEPSKQVITQSNTPKEIQKPTEQIDIEKLFAQTTNKTVKTEDIDQKASNFNE
FT                   LFGNIKEIQEEKTTKIQSSAKSGISSAPKPQASELVKQLNDSLLQEESSTQGENTKAQK
FT                   IGIYDEFLGKVVRIITQRWTQYYPNSEKISVKVKIFIDENGKFGYTSVEKSGNPLYDAK
FT                   VAEFLESQKGKFITYPPQNKNISITMNLRDEAKVKND"
FT   gene            155502..156710
FT                   /locus_tag="C1336_000020085"
FT                   /note="C1336_000020085 identified by Glimmer3 with a raw
FT                   score of 9.61."
FT   CDS             155502..156710
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020085"
FT                   /product="TolB protein, putative"
FT                   /note="C1336_000020085 identified by Glimmer3 with a raw
FT                   score of 9.61. Gene function extrapolated from C8J_0105
FT                   (CP000814.1) after blastn alignment (99.24 percent identity
FT                   over a 1183 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31791.1"
FT                   /translation="MKKIVAIFLVFLGSLWAEDPVIDVVNSGVVLPKIIVKDNSNLSDE
FT                   NLKKSFYNIIVNDLKVSSNFEVVANATETSNYTFEYALNKNGNTLSLNVKIKAGGSDKS
FT                   EQTYTLNGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSSKKSQIIMADYTL
FT                   TYQKVIVDGGLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSSGGMVVA
FT                   SDVSVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVS
FT                   DRLGYPNIFMQDLNSNSAEQVVFHGRNNSAVSTYKDFLVYSSREPNQAGVFNIYLMSIN
FT                   SDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNANKTFYFPLRVGKIQS
FT                   IDW"
FT   gene            156787..157284
FT                   /locus_tag="C1336_000020086"
FT                   /note="C1336_000020086 identified by Glimmer3 with a raw
FT                   score of 12.77."
FT   CDS             156787..157284
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020086"
FT                   /product="peptidoglycan associated lipoprotein (omp18)"
FT                   /note="C1336_000020086 identified by Glimmer3 with a raw
FT                   score of 12.77. Gene function extrapolated from C8J_0106
FT                   (CP000814.1) after blastn alignment (99.80 percent identity
FT                   over a 488 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31792.1"
FT                   /translation="MKKILFTSIAALAVVISGCSTKSTSVSGDSSVDSNRGSGGSDGWD
FT                   IDSKISQLNDTLNKVYFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEWGT
FT                   DEYNQALGLKRAKAVKEALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAEFKL
FT                   SR"
FT   gene            157288..158235
FT                   /locus_tag="C1336_000020087"
FT                   /note="C1336_000020087 identified by Glimmer3 with a raw
FT                   score of 12.48."
FT   CDS             157288..158235
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020087"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020087 identified by Glimmer3 with a raw
FT                   score of 12.48. Gene function extrapolated from
FT                   CJJ81176_0149 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 100 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31793.1"
FT                   /translation="MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKEK
FT                   LDNLNNENIQTNARINEINERIEGLQSTLEGINSQYAKSNSRLSQVEENNQNIENNFTS
FT                   EIQKLKAYVEESRKIQEANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSVKTITP
FT                   SVVVSTADSNSTIENNNTQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFEDSKA
FT                   KLNFLITKQYKPARANFWLGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLYHTAIS
FT                   LDKTGDTKTANGFYKALKTNYPNSPEAKASPNRK"
FT   gene            158250..158819
FT                   /locus_tag="C1336_000020088"
FT                   /note="C1336_000020088 identified by Glimmer3 with a raw
FT                   score of 13.92."
FT   CDS             158250..158819
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020088"
FT                   /product="FKBP-type peptidyl-prolyl cis-trans isomerase
FT                   SlyD"
FT                   /note="C1336_000020088 identified by Glimmer3 with a raw
FT                   score of 13.92. Gene function extrapolated from
FT                   CJJ81176_0150 (CP000538.1) after blastn alignment (97.80
FT                   percent identity over a 500 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31794.1"
FT                   /translation="MAIEKNSVVSMFYELKDANTNEVLESNLYSQPISFILGKGQILES
FT                   LEEEVMKLDCPSNADVVIQKEKGLGEYDENAIQTLPKEQFAGIDLKVGMELFGEGENGE
FT                   TVRVTVKEIGENDVTIDYNHPYAGRDLLFSLNIVDARAASEDEILTGIIAGSHSCGCGS
FT                   GHKHDHHHGHGGGGCCGGGGCGCGCH"
FT   gene            158819..159739
FT                   /locus_tag="C1336_000020089"
FT                   /note="C1336_000020089 identified by Glimmer3 with a raw
FT                   score of 12.61."
FT   CDS             158819..159739
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020089"
FT                   /product="malonyl CoA-acyl carrier protein transacylase"
FT                   /note="C1336_000020089 identified by Glimmer3 with a raw
FT                   score of 12.61. Gene function extrapolated from Cj0116
FT                   (AL111168.1) after blastn alignment (97.50 percent identity
FT                   over a 921 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31795.1"
FT                   /translation="MNTAFIFPGQGSQSLGMGKDFYENSIKAKELLQNASDFCKIDFKH
FT                   LLFEENEKLNQSEFTQPAIVLNSLMAYSVLLEKKSDLSSKFALGHSLGEFSALAVNGAF
FT                   DFLEALSLVNKRGLFMQEDCVKVEAGMMVVLGLGDERVEELCQKAQKENKQIFAANYNC
FT                   DGQIVVAGLKPDLASYESVFKEAGAKRAMLLNMSVASHCPLLENASAKLCVELEKVLKP
FT                   NFKAVISNANAKIYTSKEEALEFLKAQLISPVLYKQSIKACENEVDYFIEFGASVLKGL
FT                   NKKITSKETYALTNMNDIDEFLKVI"
FT   gene            159739..160425
FT                   /locus_tag="C1336_000020090"
FT                   /note="C1336_000020090 identified by Glimmer3 with a raw
FT                   score of 13.91."
FT   CDS             159739..160425
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020090"
FT                   /product="MTA/SAH nucleosidase"
FT                   /note="C1336_000020090 identified by Glimmer3 with a raw
FT                   score of 13.91. Gene function extrapolated from CJE0112
FT                   (CP000025.1) after blastn alignment (99.03 percent identity
FT                   over a 206 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31796.1"
FT                   /translation="MKIAILGAMSEEITPLLETLKDYTKIEHANNTYYFAKYKNHELVL
FT                   AYSKIGKVNSTLSASVMIEKFGAQALLFTGVAGAFNPELEIGDLLYATKLAQYDLDITA
FT                   FGHPLGFVPGNEIFIKTDEKLNNLALEVAKELNIKLRAGIIATGDEFICDEAKKAKIRE
FT                   IFNADACEMEGASVALVCDALKVPCFILRAMSDKAGEKAEFDFDEFVINSAKISANFVL
FT                   KMCEKL"
FT   gene            160422..161177
FT                   /locus_tag="C1336_000020091"
FT                   /note="C1336_000020091 identified by Glimmer3 with a raw
FT                   score of 9.68."
FT   CDS             160422..161177
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020091"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020091 identified by Glimmer3 with a raw
FT                   score of 9.68. Gene function extrapolated from C8J_0111
FT                   (CP000814.1) after blastn alignment (99.07 percent identity
FT                   over a 756 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31797.1"
FT                   /translation="MINLSKKLIRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALAHLL
FT                   NRMQAHAPFKFELEAVTLSYGMGEDYSHLHAHCEEHGIKHSVLDSNIYEVSGDTIRENS
FT                   SFCSYFSRMRRGALYTYALEKGFNKLAIAHHLDDAAESFFMNFIHNGALRTLAPIYQSK
FT                   RGVIVIRPLIFVRERQLRDNATQNELSVIGNEFCPGMKLSEKNVKFPHAREEAKQLLAN
FT                   LEKDHPKLFTSLKTAFANLHTESFWLQKA"
FT   gene            161182..161703
FT                   /locus_tag="C1336_000020092"
FT                   /note="C1336_000020092 identified by Glimmer3 with a raw
FT                   score of 12.54."
FT   CDS             161182..161703
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020092"
FT                   /product="putative hydrolase"
FT                   /note="C1336_000020092 identified by Glimmer3 with a raw
FT                   score of 12.54. Gene function extrapolated from Cj0119
FT                   (AL111168.1) after blastn alignment (99.04 percent identity
FT                   over a 522 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31798.1"
FT                   /translation="MKKAFVLVDYQNDFIDGSLGFDKALKIKENILKALNQIDFNNTHL
FT                   LLTYDTHDEHYLQSKEGLNLPVKHCIKESLGWQMPKEFEPFLQKAHKIFYKNTFGSLEL
FT                   ANFIQKSDYEELHFAGLVSHICVFCNIILAFGAKPNARIILHQNLSASFDENLEKSAFD
FT                   ILRAYGIEIV"
FT   gene            161703..162317
FT                   /locus_tag="C1336_000020093"
FT                   /note="C1336_000020093 identified by Glimmer3 with a raw
FT                   score of 11.84."
FT   CDS             161703..162317
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020093"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020093 identified by Glimmer3 with a raw
FT                   score of 11.84. Gene function extrapolated from Cj0120
FT                   (AL111168.1) after blastn alignment (99.35 percent identity
FT                   over a 615 bp alignment). Similar to Cj0120."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31799.1"
FT                   /translation="MQGFILHTQKVKDEDLIVYILSPKMLIKAYRFYGLRHSSILSGYK
FT                   IDFALEENPSFLPRLKDVLHLGFLWIMQRDKMLIWQEFIRLLYRHLKDVEELDSFYFDL
FT                   LDECVKRFEKQNPKRVIVDAYLKILEFEGRLHKDFFCFACDEKIQNSITLLRAFLPSHS
FT                   QCALGFEFEEKKLKQFYSSKNCAIFDDEEIENLYHLIKEGL"
FT   gene            162314..162718
FT                   /locus_tag="C1336_000020094"
FT                   /note="C1336_000020094 identified by Glimmer3 with a raw
FT                   score of 15.11."
FT   CDS             162314..162718
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000020094"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000020094 identified by Glimmer3 with a raw
FT                   score of 15.11. Gene function extrapolated from CJE0116
FT                   (CP000025.1) after blastn alignment (98.50 percent identity
FT                   over a 400 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein TIGR00043' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31800.1"
FT                   /translation="MILSNEKCDFLESIASFLSPKDVELVFVDSKEMQEINLEQRKQDK
FT                   TTDVLSFPLENIDESLPLGSVVINVDLAKEKAKELGHSYEEEISLLFIHAMLHLLGFDH
FT                   ENDNGEMREKEKELIEYFNLPKSLIVRTLG"
FT   gap             162724..162984
FT                   /estimated_length=261
FT   gene            163182..164105
FT                   /locus_tag="C1336_000030000"
FT                   /note="C1336_000030000 identified by Glimmer3 with a raw
FT                   score of 10.88."
FT   CDS             163182..164105
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000030000 identified by Glimmer3 with a raw
FT                   score of 10.88. Gene function extrapolated from CJE0905
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 80 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31685.1"
FT                   /translation="MGEDFNKAAGLPEDFKIHKSTLDEIYRYNTDFNAHTANYLGVSSY
FT                   YSNIDMANTIKQYYNKFDEILNHTFNNANKTSFTEVDLNSLPKGVSMSVGDFDFASPLN
FT                   LESKTITNYYNTQEQYNEIEQLGILGHINTGLQPLNFTPQSMQTQNTSNKYIFNPDMSV
FT                   YPQNEDGSYSKEALFMSFLKSTGADVLKGGNTTMNPIVKSFKEAMAKESFDGSLASLDD
FT                   IMTGKVDFASLLKGYAQEGWLDADIYAMEKGVAWQNAIIGYGGALFDNQFNQAKANGWK
FT                   ASSESINSYVGSIMDRLNNLIGQTRV"
FT   gene            complement(164102..165019)
FT                   /locus_tag="C1336_000030001"
FT                   /note="C1336_000030001 identified by Glimmer3 with a raw
FT                   score of 13.32."
FT   CDS             complement(164102..165019)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030001"
FT                   /product="tRNA-dihydrouridine synthase B"
FT                   /note="C1336_000030001 identified by Glimmer3 with a raw
FT                   score of 13.32. Gene function extrapolated from C8J_0116
FT                   (CP000814.1) after blastn alignment (98.32 percent identity
FT                   over a 179 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31686.1"
FT                   /translation="MIDFSKKPLFLAPMAGFSDLPFRNVVKKFGADITISEMISSNALV
FT                   YESSKTLHMLERAELENPYIVQIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNKVV
FT                   KQCAGSALLENLELFKNLVGVIKENNKKNLTSVKFRLGFNEKYPEKMAKICESLGVDFV
FT                   SIHGRTRKQLYSGKADYESIANAKASVKIPVIANGDINAQNAKEVYKITKCDGLMIGRA
FT                   SVGNPWIFYEIKSGKSVDEKLKKEIILTHFDEMIKHYKDQGVSIFRKHLHEYSKGHKDA
FT                   SVFRDEVNRINDAKIMQEKIENFF"
FT   gene            complement(165016..166002)
FT                   /locus_tag="C1336_000030002"
FT                   /note="C1336_000030002 identified by Glimmer3 with a raw
FT                   score of 13.44."
FT   CDS             complement(165016..166002)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000030002 identified by Glimmer3 with a raw
FT                   score of 13.44. Gene function extrapolated from CJE0119
FT                   (CP000025.1) after blastn alignment (99.32 percent identity
FT                   over a 146 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31687.1"
FT                   /translation="MKIKLFLLASFIYIALIFAFAWHLELGSYTLNISTYTFELPIMIW
FT                   LVIPLFVYMILAVLHIAFYGFLRYLKFKHFFKDAAKFEAYTQDLLLEKDLKTTFQTKEF
FT                   RAVAQLFKTIKTHEKIPHSNKINEILDLIDGLNKNEFFNLSKFKLENNNVLYLQNEKNH
FT                   LKNDANYAYSKLKNLNEIKDEFEEIAFNTLIEKASYEQIKNVKIPKKPSEVLTLIKRFK
FT                   EGNLELSAAEYEVLLSHNILSEKDYLNAAKLSTKLLNPDAILGIFNKIKNEKSEALRAH
FT                   LYLLAEFGLLDELREQIHNDDKKFNDFKAFLALREKNIKINLNQLIQ"
FT   gene            complement(165992..166354)
FT                   /locus_tag="C1336_000030003"
FT                   /note="C1336_000030003 identified by Glimmer3 with a raw
FT                   score of 8.92."
FT   CDS             complement(165992..166354)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000030003 identified by Glimmer3 with a raw
FT                   score of 8.92. Gene function extrapolated from Cj0125c
FT                   (AL111168.1) after blastn alignment (98.91 percent identity
FT                   over a 275 bp alignment). Similar to Cj0125c."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31688.1"
FT                   /translation="MKKNEIQNFKNILEERKKTILENLQSNSNEIEALHNSVPSDSVDF
FT                   SVIETGSQIDFTISTNLKEELIEIENSLDKIKNGTYGICESCDDEIDSQRLKVKPHARY
FT                   CITCRQIAEQGKKHEN"
FT   gene            complement(166366..166815)
FT                   /locus_tag="C1336_000030004"
FT                   /note="C1336_000030004 identified by Glimmer3 with a raw
FT                   score of 12.44."
FT   CDS             complement(166366..166815)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000030004 identified by Glimmer3 with a raw
FT                   score of 12.44. Gene function extrapolated from C8J_0119
FT                   (CP000814.1) after blastn alignment (98.67 percent identity
FT                   over a 450 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31689.1"
FT                   /translation="MQVNIFCIQKSDEFKTWSEKYSKLISKYATLKEINFFNKKIALAQ
FT                   NLNAIEAKKSYEEAFMPYKKGYCIALDEKGKELTSIEFAKLIQDKNELSFFIGGAYGLR
FT                   EEFNQSLDFRLSLSKLTLAHQFVKTLLLEQIYRAFCINNNHPYHK"
FT   gene            complement(166817..167659)
FT                   /locus_tag="C1336_000030005"
FT                   /note="C1336_000030005 identified by Glimmer3 with a raw
FT                   score of 14.15."
FT   CDS             complement(166817..167659)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030005"
FT                   /product="acetyl-CoA carboxylase, carboxyl transferase,
FT                   beta subunit"
FT                   /note="C1336_000030005 identified by Glimmer3 with a raw
FT                   score of 14.15. Gene function extrapolated from CJE0122
FT                   (CP000025.1) after blastn alignment (97.98 percent identity
FT                   over a 843 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31690.1"
FT                   /translation="MNFADIFSKIRRQQPSVKEAPNHWVKCQSCHALMYYKEIESCFNV
FT                   CPKCNYHMRISADERIKLLSDEGSFIEYDANLEAIDPLKFVDSKSYKKRLSEGESKTGR
FT                   KSSVISGECEINGLKTQLVVFDFSFMGGSLGSVEGEKIVRAVQRAITSKTPLVIVSASG
FT                   GARMQESTYSLMQMSKTSAALKLLSKEKLPYISILTDPTMGGVSASFAWLGDLIIAEPE
FT                   ALVGFAGARVIKQTIGTDLPEGFQKAEFLLEHGLIDAIVERGEQKQYLSDVLKFFSGK"
FT   gene            complement(167668..168390)
FT                   /locus_tag="C1336_000030006"
FT                   /note="C1336_000030006 identified by Glimmer3 with a raw
FT                   score of 9.76."
FT   CDS             complement(167668..168390)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030006"
FT                   /product="SuhB-like protein"
FT                   /note="C1336_000030006 identified by Glimmer3 with a raw
FT                   score of 9.76. Gene function extrapolated from C8J_0121
FT                   (CP000814.1) after blastn alignment (97.65 percent identity
FT                   over a 723 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31691.1"
FT                   /translation="MKEFLDACLNANLQIRKYLNNIPQNDLKLCSKLGYDENQGYELDL
FT                   KCEQIFIKYLSCFGQIFSEESGLIGKDNPKQMILDPLDGSSNFVSKIPFYGTSIALIEK
FT                   DQAKSAFVCNLVSQEIFAFNNNQAFKSNLSDPKYSPLTPNLFSKIGIVEKISLYPELLD
FT                   FLTKNQLKFRSLGATALSLAYASYFSFVLILGKTRIFDTVAALTIHQNLYIEKNENFLL
FT                   LSQDKKIFDIILEFLKNN"
FT   gene            complement(168390..170666)
FT                   /locus_tag="C1336_000030007"
FT                   /note="C1336_000030007 identified by Glimmer3 with a raw
FT                   score of 10.82."
FT   CDS             complement(168390..170666)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030007"
FT                   /product="outer membrane protein, OMP85 family"
FT                   /note="C1336_000030007 identified by Glimmer3 with a raw
FT                   score of 10.82. Gene function extrapolated from C8J_0122
FT                   (CP000814.1) after blastn alignment (96.89 percent identity
FT                   over a 2220 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31692.1"
FT                   /translation="MLNFFCYYTAFNKALGKKSMKKHLISICALVAIANAATIKDIKFI
FT                   GLNHLSNTSAINITGLKIGEEIDPAKINTAILNLYKQNYFENISVENNNGILEIIVTEK
FT                   PTIAKVSITGIASNDRKQVESILGIKRGTLLDEGSIKEAIERIKAYYEAKSYFDTIVEY
FT                   KKKTLENTDGLELEFIVNRGENIIIDNVHLSGAKKFSYSDIEPSIVNKEKEFMGWMWGR
FT                   NDGKLKVFELSNDSSRIADEYMKKGYLDVQVSPPYLKTYTDTYQANLTYFIKEGKPYKI
FT                   KSINIENPLFDDKQNAQTVKDLRSSAGKTINIEDIRKDVKTIETQSADLGYAFVEVYPD
FT                   IQKNDQTQEATVVFKVIPHDKVYIRNVIISGNSRTVDRVIRRELYITEGNLYNRTDLSE
FT                   SKNALKRTSYFDDVNIKEEKVDDTHIDLIVDVKEASTGAISGGIGYGSSDGILLNASLS
FT                   DTNIFGSGIKSSVSVDKSDDTLSGRISLINPRVLDSQYSLGGTLYSNDYEWDNYSEKNY
FT                   GFDITVGRQFARYYNVSLTYNLEQSDIYHLSPTLLRTGYELGKSIKSSITPAITFNNTD
FT                   DYYLPRSGIIASTSLEYAGLGGDQEFISSSSKFNFYQGLQDYIGYDLIYRYKASFYKVW
FT                   NEGYLPINQRIYLGGIRSIRGFESRTVSPKNQWGDEVGGTIAFANSVELSFPLIDRIKL
FT                   RGSVFFDYGMIGRKNLDEIKRMSTGIGIEWITPIGPLQLVFAKPLNDKKGDDTNSFEFN
FT                   LGTRF"
FT   gene            170686..171513
FT                   /locus_tag="C1336_000030008"
FT                   /note="C1336_000030008 identified by Glimmer3 with a raw
FT                   score of 12.01."
FT   CDS             170686..171513
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030008"
FT                   /product="prephenate dehydrogenase"
FT                   /note="C1336_000030008 identified by Glimmer3 with a raw
FT                   score of 12.01. Gene function extrapolated from
FT                   CJJ81176_0165 (CP000538.1) after blastn alignment (99.64
FT                   percent identity over a 828 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31693.1"
FT                   /translation="MKIAIIGLGLMGGSLGLCLKENKLISCVYGMDLSKENEKDALRLG
FT                   LIHELIEFKDLALCDMIFVATPVNAIIEILQKLVDLPSNVTIIELGSTKRKIIESLPKN
FT                   LIKQTLFAHPMTGTENSGPKAAFKELYKDAVCVLCDSEIADDLHQKRAVEIFSHLGMKI
FT                   VFMDSKAHDHHAAIISHLPHVISFSLANFVMKEEDKRNIVHLAGGSFKGMSRIAKSSPQ
FT                   MWESIFLQNKDNLLSSIDFFQQELERCKQMIQLDKNDELREWMKQANTLREIL"
FT   gene            171593..172966
FT                   /locus_tag="C1336_000030009"
FT                   /note="C1336_000030009 identified by Glimmer3 with a raw
FT                   score of 12.37."
FT   CDS             171593..172966
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030009"
FT                   /product="peptidase, M23/M37 family"
FT                   /note="C1336_000030009 identified by Glimmer3 with a raw
FT                   score of 12.37. Gene function extrapolated from
FT                   CJJ81176_0166 (CP000538.1) after blastn alignment (99.14
FT                   percent identity over a 1273 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31694.1"
FT                   /translation="MAKRKGKTYLSVLILVLIAILIFFISRLSIFEKNPPQILMPDVVY
FT                   TDLKKPILVHVKDDESSIKNVQIILHKDDNTSAMVIADEKISNLKDITLQVALPKFGYK
FT                   ENVKSFVLEVIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAGAVV
FT                   FKADDANLDKVYIETNKGKIFKVTPYVKEGYYAALIAWDARDEEFRAFVIATDKAGNIS
FT                   KERIRYYFVNRKYRVSNINLTDKFLDGKIENLANQYAPKDNNLNRYEKFKFVNETLRNS
FT                   NEELIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFADHRYYSYNGQFVSDSYHMGLD
FT                   LASVAQASIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDLDEMINKQ
FT                   SIIGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGKKIILGKN"
FT   gene            172966..173850
FT                   /locus_tag="C1336_000030010"
FT                   /note="C1336_000030010 identified by Glimmer3 with a raw
FT                   score of 14.51."
FT   CDS             172966..173850
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030010"
FT                   /product="UDP-3-0-acyl N-acetylglucosamine deacetylase"
FT                   /note="C1336_000030010 identified by Glimmer3 with a raw
FT                   score of 14.51. Gene function extrapolated from CJE0127
FT                   (CP000025.1) after blastn alignment (98.42 percent identity
FT                   over a 885 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31695.1"
FT                   /translation="MKQLTLAKTVKGVGIGLHKGEPIEITLEPLEANSGIVFFRSDLNA
FT                   SYKASPENVINTQMATVLGDERGFISTIEHLMSAINAYGIDNVRIVLNANEAPVMDGSS
FT                   ISFCMMLDEAGVKELDAPKKIMVIKKPIEVRDGNKFVRLTPTKEPRINYTIKFDNAVIG
FT                   EQSYNFEFSKKNYIENIARARTFGFLKDVQALRSMNLALGGSLENTIVVDENRILNPEG
FT                   LRFKDEFVRHKILDAIGDLTLLGYRVFGDYTSYAGSHHLNHLLTKEVLKDKDAYEIVSL
FT                   EKTTQKAYEKVFA"
FT   gene            173862..174290
FT                   /locus_tag="C1336_000030011"
FT                   /note="C1336_000030011 identified by Glimmer3 with a raw
FT                   score of 12.75."
FT   CDS             173862..174290
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030011"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000030011 identified by Glimmer3 with a raw
FT                   score of 12.75. Gene function extrapolated from C8J_0126
FT                   (CP000814.1) after blastn alignment (98.60 percent identity
FT                   over a 429 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31696.1"
FT                   /translation="MLNALSKPLMIGIYQDDKLIKTYKSEEKASEFLPKILDELLKEYD
FT                   FTSLIYANGPGSYMGIKISYVSLSTLSIVKNIPLFAVSAFELNGYKPISANKNFCFVYK
FT                   EGEICLEQNIPAEFFLPKNLQELKLNNDNLPFYFLDAI"
FT   gene            174299..175177
FT                   /locus_tag="C1336_000030012"
FT                   /note="C1336_000030012 identified by Glimmer3 with a raw
FT                   score of 14.16."
FT   CDS             174299..175177
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030012"
FT                   /product="homoserine kinase"
FT                   /note="C1336_000030012 identified by Glimmer3 with a raw
FT                   score of 14.16. Gene function extrapolated from CJE0129
FT                   (CP000025.1) after blastn alignment (98.86 percent identity
FT                   over a 879 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31697.1"
FT                   /translation="MKILVPATSANLGPGFDCLGLSLKLFNETQIQKSGVFSISIGGEG
FT                   SDNIFLKKNNIFVNIFYEIYEKLSGKKDNFRFIFQNNIPLSRGLGSSSAVIVGAIASAY
FT                   YMSGFKVEKERILDEALIYENHPDNIAPATLGGFVCSLVEKNKVYSIKKEIDKDLAAVV
FT                   VIPNLAMSTEQSRQALAKNLSFNDAVFNLSHASFLTACFLEKKYEFLKFASQDKLHEIN
FT                   RMKNLPELFEVQKFALENKALMSTLSGSGSSFFSLAFKDDALALAKKMQTKFKDFRVQY
FT                   LEFDDNGFEIC"
FT   gene            175262..175459
FT                   /locus_tag="C1336_000030013"
FT                   /note="C1336_000030013 identified by Glimmer3 with a raw
FT                   score of 6.79."
FT   CDS             175262..175459
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030013"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000030013 identified by Glimmer3 with a raw
FT                   score of 6.79. Gene function extrapolated from C8J_0128
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 90 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31698.1"
FT                   /translation="MLFRFKVVLGDIVPKAEHGRSGYLCQNCIEKEDKILQKAFSKICK
FT                   NLNTKITQQGLKEIFLNGKD"
FT   gene            175446..178058
FT                   /locus_tag="C1336_000030014"
FT                   /note="C1336_000030014 identified by Glimmer3 with a raw
FT                   score of 16.02."
FT   CDS             175446..178058
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030014"
FT                   /product="translation initiation factor IF-2"
FT                   /note="C1336_000030014 identified by Glimmer3 with a raw
FT                   score of 16.02. Gene function extrapolated from C8J_0129
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 194 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31699.1"
FT                   /translation="MAKIRIHEIAKELGYDSKEIIEKANELGLGIKTASNAVEPEIAAA
FT                   IYEYIQTREIPEAFKKNIKTSTAKKPKKENIKEQEKLNESEKKEPKKEEKLKQEVKKEE
FT                   LKVEKENAKEEKQEIIDAHKPQSLASATLAKRRGLVIVKKKKDEEEIQVKKEEVKNSND
FT                   ISINNEERLSLKTMFSNADESLKKKKKEKKSFVASKKESTEKMNFLDEHDFGDISLDDE
FT                   DEVVLPDFSVKEQEKPQNINKKQPNFIRQAVGNSAGFGLEGGIQRRSRKKPPKKIEKKE
FT                   VEEVSSVAISKEIRVYEFADKIGRSTSEVISKLFMLGMMTTKNDFLDEDAIEILAAEFG
FT                   IEINIINEADEFDYVKDYEEETDEKDLVTRAPVITIMGHVDHGKTSLLDYIRKSRVASG
FT                   EAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVVAADDGVKPQ
FT                   TKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGSYEFVGVSAKT
FT                   GMGIEDLLEIVLLQADILELKANPKSFAKASIIESSVQKGRGAVATIIVQNGTLTVGST
FT                   VVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIAVKTDKEAREYAN
FT                   KRHEYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSLEALKASLEKLRND
FT                   EIKVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEVKERAKDKGVEIKTYNVIY
FT                   NLLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCMVTEGVINRGAKIRLI
FT                   RDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVGDYIESYKEVEEQASL"
FT   gene            178055..178417
FT                   /locus_tag="C1336_000030015"
FT                   /note="C1336_000030015 identified by Glimmer3 with a raw
FT                   score of 7.31."
FT   CDS             178055..178417
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030015"
FT                   /product="ribosome-binding factor A"
FT                   /note="C1336_000030015 identified by Glimmer3 with a raw
FT                   score of 7.31. Gene function extrapolated from CJE0132
FT                   (CP000025.1) after blastn alignment (99.40 percent identity
FT                   over a 331 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31700.1"
FT                   /translation="MNPSEIKKLRTESILKELIPEALANLDDENLKNLCVVDVECKKGR
FT                   YDAFVYLDKMFFNVHEQEKILSSLKKASRALQNYCMSEQGWYRCPNFHFKFDDRLEYQN
FT                   HMDGLFEKIKKDKNES"
FT   gene            178407..178829
FT                   /locus_tag="C1336_000030016"
FT                   /note="C1336_000030016 identified by Glimmer3 with a raw
FT                   score of 16.36."
FT   CDS             178407..178829
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030016"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000030016 identified by Glimmer3 with a raw
FT                   score of 16.36. Gene function extrapolated from C8J_0131
FT                   (CP000814.1) after blastn alignment (97.40 percent identity
FT                   over a 308 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31701.1"
FT                   /translation="MNLEALCKEAGLSFYDDELVSENGRKIYRIYVQKEGGVNLDDCAR
FT                   LSEILSPIFDVEPPVNGEYFLEVSSPGLERKLSKIEHFAKSIGELVKITANEKEKFEAK
FT                   IIAVDDENITLENLENKEKTTINFNDIKKARTFVEW"
FT   gene            complement(178839..179825)
FT                   /locus_tag="C1336_000030017"
FT                   /note="C1336_000030017 identified by Glimmer3 with a raw
FT                   score of 6.27."
FT   CDS             complement(178839..179825)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030017"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000030017 identified by Glimmer3 with a raw
FT                   score of 6.27. Gene function extrapolated from C8J_0132
FT                   (CP000814.1) after blastn alignment (99.03 percent identity
FT                   over a 721 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31702.1"
FT                   /translation="MSINDEKFDINLKFYFFMKYLVKINFSDIQIINILSHISKNKNSL
FT                   YELKQYINLNTKNGINQWSYLEQIIYEIRNIIDFNVFIFALKIYSIKNFLLELAKIKQM
FT                   SNIELLSKLDPLSLEYDKITIYNPYSTRVNGALLALTFFNHIDNNQFFHDNINKEYFLS
FT                   ICQLSQELRKHGLEPNQIFMLIFNESINQSIISYSGNNYENRILQKLQSIGINQETITK
FT                   KHDENDSSTEFDFFFNFNGKSYGIGAKRTLRERYKQFIKTSQMSKINVMIEITLGLDLG
FT                   EEKAKTIRNYGVYLIVSDEIYEQNKFLQNIDGVFGSSQLTLELLETL"
FT   gene            complement(179812..180777)
FT                   /locus_tag="C1336_000030018"
FT                   /note="C1336_000030018 identified by Glimmer3 with a raw
FT                   score of 9.25."
FT   CDS             complement(179812..180777)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030018"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000030018 identified by Glimmer3 with a raw
FT                   score of 9.25. Gene function extrapolated from C8J_0133
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 175 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31703.1"
FT                   /translation="MVNNTKKLKAIDLFAGIGGIRIGFKNIFQEKLEFVFSSEIDKFAC
FT                   QTYFCNFNELPHGDITQINENNIPKHNILLAGFPCQAFSIAGHRKGFNDIRGTLFFDVA
FT                   RIVKKHKPEIVFLENVKGFKNHDKGKTFSVVKNTLEDMGYDVFSEVLNARNFGIPQNRE
FT                   RIYIVAFLKNKFKNISFNFNELKNIEIKSKLGDILEKNVDEKYTISDKLWAGHQRRKLE
FT                   HKKKGNGFGYSLFNHNSDYTSTISARYYKDGSEILIEQKNKNPRKLTPREAARLQGFPN
FT                   SFKITTSDNQSYKQFGNSVAIPVIENIAKLIHRELYNVNK"
FT   gene            180877..181308
FT                   /locus_tag="C1336_000030019"
FT                   /note="C1336_000030019 identified by Glimmer3 with a raw
FT                   score of 12.68."
FT   CDS             180877..181308
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030019"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000030019 identified by Glimmer3 with a raw
FT                   score of 12.68. Gene function extrapolated from
FT                   CJJ81176_0176 (CP000538.1) after blastn alignment (99.07
FT                   percent identity over a 432 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31704.1"
FT                   /translation="MEKIFEDYVAYMLKKVNPTQDIKVQNNGKYLISKNDENCFMLKPD
FT                   LYIENKTILDTKWKIPNDSEDDKKQGIEQSDLYQMFAYACKFKIYDIKLVYPLCEKTQD
FT                   LQRKIAEKFFVFKASEHLYFKEQGQKDIKVQVCFAPLPF"
FT   gene            complement(181297..182100)
FT                   /locus_tag="C1336_000030020"
FT                   /note="C1336_000030020 identified by Glimmer3 with a raw
FT                   score of 12.28."
FT   CDS             complement(181297..182100)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030020"
FT                   /product="cation ABC transporter, permease protein"
FT                   /note="C1336_000030020 identified by Glimmer3 with a raw
FT                   score of 12.28. Gene function extrapolated from
FT                   CJJ81176_0177 (CP000538.1) after blastn alignment (99.38
FT                   percent identity over a 160 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31705.1"
FT                   /translation="MLEILNFTFFQNALLGSILVSIACGIIGTLVMINRLFSMAGGITH
FT                   GAFGGIGIAFYFSLPILLSTGIFTLFLAFLVAFLAKHYEHRSDSIIAVIWAFGMAVGII
FT                   LIDLSPSYNTDLMAYLFGSILAVGTQDLWLMALVDSVVVLLIFLFYRQFEALSFDAEFA
FT                   KVRGINTSFFHYLLIALMAFCIVISIRLVGLILVMALLSIPSFIAENFTKRLGFIMILA
FT                   SFLSMIFCVLGLILSYYLNLSSGACIIAVACFSFLVHLIGKFLKR"
FT   gene            complement(182093..182947)
FT                   /locus_tag="C1336_000030021"
FT                   /note="C1336_000030021 identified by Glimmer3 with a raw
FT                   score of 10.13."
FT   CDS             complement(182093..182947)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030021"
FT                   /product="cation ABC transporter, ATP-binding protein"
FT                   /note="C1336_000030021 identified by Glimmer3 with a raw
FT                   score of 10.13. Gene function extrapolated from
FT                   JJD26997_0155 (CP000768.1) after blastn alignment (100.00
FT                   percent identity over a 98 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31706.1"
FT                   /translation="MLFFEISNLNYAYDNEIILKNINLSYDNKDFLSIIGPNGAGKSTL
FT                   VKLILGLLKSKNKIHFKALQRKEIGYVPQHTLANPNFCPRVLEIVLMGLVSKKIFGFYG
FT                   KKDKEKAMQALRSVGMEKFWNKTIDSLSGGQRQRVFIARALASECKMLILDEPTASIDN
FT                   KSAIQIFELLSSLHQKGMGILLICHDINLVLAYSDKIAHLNKELFLHTNTKEKEKSSFL
FT                   KHLYENHSHFCDVEMSLNTCFCDEENCDSKKLCEQEFTRRNLKKTEFKKENFCLKFSKE
FT                   NNA"
FT   gene            complement(182960..183628)
FT                   /locus_tag="C1336_000030022"
FT                   /note="C1336_000030022 identified by Glimmer3 with a raw
FT                   score of 12.16."
FT   CDS             complement(182960..183628)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000030022"
FT                   /product="putative manganese transport system
FT                   substrate-binding protein"
FT                   /note="C1336_000030022 identified by Glimmer3 with a raw
FT                   score of 12.16. Gene function extrapolated from C8J_0137
FT                   (CP000814.1) after blastn alignment (98.99 percent identity
FT                   over a 298 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31707.1"
FT                   /translation="MKKLEKSGIYFTIGLEFEKVFTDKFKQNFPKLQVVNMQKNIALIQ
FT                   THDTHEHSHEHEHHEHEHFDPHTWLDPILVQTMALNIYDALIQKYPQNKNLYKQNLDKF
FT                   LAELDSLNLQIASKLEKLKNRDFVVYHPSWTYFAKRYNLTQIPVEILGKEPKSKDLQKL
FT                   ITLMKDKNLKVIFVQNGFPENAAKTLAKECDAKIYKIDHLSYDWENELLKTTDAFSHNL
FT                   "
FT   gap             185082..186074
FT                   /estimated_length=993
FT   gene            186882..186995
FT                   /locus_tag="C1336_000040000"
FT                   /note="C1336_000040000 identified by Glimmer3 with a raw
FT                   score of 5.21."
FT   CDS             186882..186995
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040000 identified by Glimmer3 with a raw
FT                   score of 5.21. Gene function extrapolated from
FT                   CJJ81176_0181 (CP000538.1) after blastn alignment (98.25
FT                   percent identity over a 114 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31592.1"
FT                   /translation="MPLSAMDLTKLVFMDGKNLMKDSIELKISMKPIVLVG"
FT   gene            186995..187901
FT                   /locus_tag="C1336_000040095"
FT                   /note="Features C1336_000040001, C1336_000040002 joined to
FT                   form C1336_000040095 to correct 454 sequencing error
FT                   (C1336_000040001 identified by Glimmer3 with a raw score of
FT                   12.24, C1336_000040002 identified by Glimmer3 with a raw
FT                   score of 9.92)."
FT   CDS             join(186995..187717,187719..187901)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040095"
FT                   /product="hypothetical protein"
FT                   /note="Features C1336_000040001, C1336_000040002 joined to
FT                   form C1336_000040095 to correct 454 sequencing error
FT                   (C1336_000040001 identified by Glimmer3 with a raw score of
FT                   12.24, C1336_000040002 identified by Glimmer3 with a raw
FT                   score of 9.92). Gene function extrapolated from
FT                   CJJ81176_0181 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 184 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31593.1"
FT                   /translation="MEINPFDAKSTPVKRTSLGRFKHENAEIIVEKDGSVIVYMGDDEM
FT                   NEFIYKFVSKHKYKKGADTSKILDEGTLYVGQFNGNVGDFKGQRKWIALEYGKNGLDEK
FT                   NGFKSQAQVLINTRLAASIVGATPMDRCEWIASHRQSGSKEVFATLTNNKNRQKPNAAN
FT                   PRTKNVYGQILKWMPRNSHKDDDFTWEIFALAGNPDNQQGLYKGSNNITSENKFNSPDG
FT                   LKFDRDGRLWIQIDGSYSNLTGPIACELTGIAFSEDYTTMFVGIQHPGEGLKGSTFPYG
FT                   KTPRSSVMMIRKLDGGVIGS"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(187939..188877)
FT                   /locus_tag="C1336_000040003"
FT                   /note="C1336_000040003 identified by Glimmer3 with a raw
FT                   score of 17.47."
FT   CDS             complement(187939..188877)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040003"
FT                   /product="thioredoxin-disulfide reductase"
FT                   /note="C1336_000040003 identified by Glimmer3 with a raw
FT                   score of 17.47. Gene function extrapolated from C8J_0143
FT                   (CP000814.1) after blastn alignment (98.59 percent identity
FT                   over a 354 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31594.1"
FT                   /translation="MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSE
FT                   IENYPGVAQVMDGISFMAPWNEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGSKTELT
FT                   KAVIVCTGSAPKRAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYL
FT                   ANICSKVYLIHRRDEFRAAPSTVEKVKKNEKIELITSASVDEVYGDKMGVTGVKVKLKD
FT                   GSIRDLNVPGIFTFVGLNVRNEILKQDDGKFLCNMEEGGQVSVDLKMQTSVAGLFAAGD
FT                   LRKDAPKQVICAAGDGAVAALSAMAYIESLH"
FT   gene            complement(189011..189325)
FT                   /locus_tag="C1336_000040004"
FT                   /note="C1336_000040004 identified by Glimmer3 with a raw
FT                   score of 16.69."
FT   CDS             complement(189011..189325)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040004"
FT                   /product="thioredoxin"
FT                   /note="C1336_000040004 identified by Glimmer3 with a raw
FT                   score of 16.69. Gene function extrapolated from C8J_0144
FT                   (CP000814.1) after blastn alignment (98.73 percent identity
FT                   over a 315 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31595.1"
FT                   /translation="MGKYIELTSDNFAQAKEGVALVDFWAPWCGPCRMLAPVIDELAND
FT                   FDGKAKICKVNTDEQGDLAAEFGVRSIPTLIFFKNGEVVDQLVGAQSKQAISDKLNSLL
FT                   "
FT   gene            complement(189382..189720)
FT                   /locus_tag="C1336_000040005"
FT                   /note="C1336_000040005 identified by Glimmer3 with a raw
FT                   score of 14.64."
FT   CDS             complement(189382..189720)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040005"
FT                   /product="predicted endonuclease"
FT                   /note="C1336_000040005 identified by Glimmer3 with a raw
FT                   score of 14.64. Gene function extrapolated from C8J_0145
FT                   (CP000814.1) after blastn alignment (98.13 percent identity
FT                   over a 107 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31596.1"
FT                   /translation="MGVKAYLDGILGEDKACKFLKKQGFEILKRNFHSKFGEIDIIAQK
FT                   DEILHFIEVKFTQNNYEVSERLDRKKLEKILKTIEFYHLKNGISSDFQIDLICIKNDMI
FT                   QFCENISF"
FT   gene            complement(189720..190967)
FT                   /locus_tag="C1336_000040006"
FT                   /note="C1336_000040006 identified by Glimmer3 with a raw
FT                   score of 16.17."
FT   CDS             complement(189720..190967)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040006"
FT                   /product="homoserine dehydrogenase"
FT                   /note="C1336_000040006 identified by Glimmer3 with a raw
FT                   score of 16.17. Gene function extrapolated from C8J_0146
FT                   (CP000814.1) after blastn alignment (97.85 percent identity
FT                   over a 978 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31597.1"
FT                   /translation="MKVAILGYGTVGSAVVKFLLENNKLIRARCGQSITPVIALARSPK
FT                   KNALIPITHSVEEILNADVDVFVELMGGVDEAFKIVSEILKKKKAVVTANKAMLAYHRY
FT                   ELENLAKNLAFGYEASVAGGIPIIKVLKEGLSANNILAIKGILNGTSNYILSSMSQKNM
FT                   SFKQALQIAQNLGYAEADPTFDIEGQDAAHKLLVLSSIAYNLKAKPEDILIEGISEIAP
FT                   EDMYFANEFEFTIKLLGIAKVREDKVELRVHPTMIDKEKMLAKVNGVMNAISINGDLLG
FT                   ESLYYGAGAGGEATASAVISDLMDIARDQVKAPMLGFVNTLEYELLSKDEIYTKYYLRV
FT                   KVEDKIGILSKITQLMSENNISIDSFLQKPKKNDENYSTLFFTTHLTYEKSIQNLLEIL
FT                   RKQDFIKTKPFMMRIE"
FT   gene            complement(190971..192173)
FT                   /locus_tag="C1336_000040007"
FT                   /note="C1336_000040007 identified by Glimmer3 with a raw
FT                   score of 14.48."
FT   CDS             complement(190971..192173)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040007"
FT                   /product="aminotransferase, classes I and II"
FT                   /note="C1336_000040007 identified by Glimmer3 with a raw
FT                   score of 14.48. Gene function extrapolated from C8J_0147
FT                   (CP000814.1) after blastn alignment (99.33 percent identity
FT                   over a 450 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31598.1"
FT                   /translation="MFDEIRFNTIERLPNYVFAEVNAIKMAARRAGEDIIDFSMGNPDG
FT                   KTPQHIIDKLCESANKDKTSGYSTSMGIYKLRLAICNWYKRKYNVNLDPENEVVATMGS
FT                   KEGFVNLARAIINPGDVAIVPTPAYPIHTQAFIIAGGNVAKMPLAYNEKFELDENQFFE
FT                   NLHKTLNESIPRPKYVVVNFPHNPTTVTCEKSFYERLIATAKKERFYIISDIAYADLTY
FT                   DDYKTPSILQIEGAKDVAVETYTLSKSYNMAGWRVGFVVGNKRLVSALKKIKSWFDYGM
FT                   YTPIQVAATIALDGDQTCVDEIRATYDKRMRILLEAFENAGWKLQKPRASMFVWAKLPE
FT                   SKRHLKSLEFSKQLLQRASVAVSPGVGFGEAGDEYVRIALIENENRIRQAARNIKKYLK
FT                   E"
FT   gene            complement(192185..192991)
FT                   /locus_tag="C1336_000040008"
FT                   /note="C1336_000040008 identified by Glimmer3 with a raw
FT                   score of 7.48."
FT   CDS             complement(192185..192991)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040008"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000040008 identified by Glimmer3 with a raw
FT                   score of 7.48. Gene function extrapolated from C8J_0148
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 105 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31599.1"
FT                   /translation="MVKKIIILTLYVNISFAISSLDLAKNLVNNPSKNSQLELLFSNNS
FT                   YIDNNGNCDIAKISQILKTNSLIALTLSNPQSLRLNFKAKADEVMFFKILSDVLTDAGY
FT                   IYFIPTDLILREGNIDYTIQVESQYVLDPGTLYNLLKENSVYIDNIKRIGAYDYEYDLN
FT                   FSNAVLKTNTNVNLNTPKSLEKPLKDYVLDLKNATNLIIDANDLDNWFPKIFFLDKNLN
FT                   LIKAVKSENKNNHFSELIPNGAIYAIVSDMYSLDNIRRGLKITLKK"
FT   gene            complement(192985..193923)
FT                   /locus_tag="C1336_000040009"
FT                   /note="C1336_000040009 identified by Glimmer3 with a raw
FT                   score of 13.63."
FT   CDS             complement(192985..193923)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040009"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040009 identified by Glimmer3 with a raw
FT                   score of 13.63. Gene function extrapolated from C8J_0149
FT                   (CP000814.1) after blastn alignment (98.37 percent identity
FT                   over a 920 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31600.1"
FT                   /translation="MLNWKKIQELNLKEVAAKTQIELDFLEALAEKNFAVLSRFNVKGF
FT                   VKILSREYELDFSDFNEEYEAYLNENNPTPQTKSKMITTKLDAYSQKSSNAWPFLIVLI
FT                   VLVIIGSGIYYFDTLKTFFKDEQNNTSTTVIDIIGQAQENLKSLGGNNVVVIDNNKAQE
FT                   TNQTESVLPSQNISLQENDKNISIENNISENNTTLLDEEKNTQIQEDINTPKTDSLKEA
FT                   HFKTSTKIWIGLIDLKSLKKTSFVKEKDFNISLDKDQLILTGAAALTMFDQENKEQKFP
FT                   AGISKRFLIKDGKITSISAAEFAKLNKGKEW"
FT   gene            complement(193916..194599)
FT                   /locus_tag="C1336_000040010"
FT                   /note="C1336_000040010 identified by Glimmer3 with a raw
FT                   score of 14.49."
FT   CDS             complement(193916..194599)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040010"
FT                   /product="putative rRNA methylase"
FT                   /note="C1336_000040010 identified by Glimmer3 with a raw
FT                   score of 14.49. Gene function extrapolated from Cj0153c
FT                   (AL111168.1) after blastn alignment (98.83 percent identity
FT                   over a 684 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31601.1"
FT                   /translation="MIVYGKQIFFYILEYHKDCINKLYLAKECDKATFSKIAKSGFKIK
FT                   KLDFKTAQAYAKGGNHQGFLLDIKESSFANLNEIKKNDFIVMLYGISDVGNIGAITRTA
FT                   YALGVGALIFIGEKLAMEGVIRTSSGAALDLPIVISNDALSVINELKQVGFYFYASDGS
FT                   GKEIHSVKISNGKKVLVLGSEGFGLSSKIVKKCDECVGIAMKNNFDSLNVSAAFAILCD
FT                   RMLNA"
FT   gene            complement(194613..195437)
FT                   /locus_tag="C1336_000040011"
FT                   /note="C1336_000040011 identified by Glimmer3 with a raw
FT                   score of 14.02."
FT   CDS             complement(194613..195437)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040011"
FT                   /product="tetrapyrrole methylase family protein"
FT                   /note="C1336_000040011 identified by Glimmer3 with a raw
FT                   score of 14.02. Gene function extrapolated from
FT                   JJD26997_0169 (CP000768.1) after blastn alignment (99.03
FT                   percent identity over a 103 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31602.1"
FT                   /translation="MLYFIPTPIGNLSDISFRALELLKTCNLVFCEDTRVSKSLVSLLN
FT                   AKFHTDIHISKFIALHSHNEKEVLASIDLKIFEKNVAYLSDAGMPGISDPGKALVEFAQ
FT                   ENNIAYEILPGANAALVALVSSAFCQKEFIFIGFLANKGKERQKDIEKILNFPYPSIIY
FT                   ESPKRILSLIEQIMILDSQREIFLIKEISKKFENKFKGNAKELFEILKNSNLNGEWVVV
FT                   LQSKEQNFLQNTLCEKDIMDLELPLKAKAKLLSKFNGKNAKEIYQKLLLSQD"
FT   gene            complement(195440..195640)
FT                   /locus_tag="C1336_000040012"
FT                   /note="C1336_000040012 identified by Glimmer3 with a raw
FT                   score of 10.48."
FT   CDS             complement(195440..195640)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040012"
FT                   /product="50S ribosomal protein L31"
FT                   /note="C1336_000040012 identified by Glimmer3 with a raw
FT                   score of 10.48. Gene function extrapolated from C8J_0152
FT                   (CP000814.1) after blastn alignment (98.51 percent identity
FT                   over a 201 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31603.1"
FT                   /translation="MKKEIHPEYVECKVSCACGNTFTTKSNKAELKVDICSNCHPFFTG
FT                   SEKIVDAAGRVEKFKKKYAMQ"
FT   gene            complement(195719..196375)
FT                   /locus_tag="C1336_000040013"
FT                   /note="C1336_000040013 identified by Glimmer3 with a raw
FT                   score of 8.93."
FT   CDS             complement(195719..196375)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040013"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040013 identified by Glimmer3 with a raw
FT                   score of 8.93. Gene function extrapolated from C8J_0153
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 179 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31604.1"
FT                   /translation="MQFLYNKQAGEEFIQLQGENFNHLKVRRVKENSELNLRNLQDNFL
FT                   YNYTITNLTRNSCTLKLLNKKSQNIKQSELNLALAIIDIKILEKTLPFLNELGVKKLHL
FT                   VFTNFSQRNFKIDLERFEKIIISSCEQCGRNTKMDLIIHQSTQEFVQKFPNAIMVDFQG
FT                   EQQSHFDEKELYFIGPEGGFSNNERLLFNRKTSLKSSNILKSQTAIIAIASKILL"
FT   gene            complement(196377..196784)
FT                   /locus_tag="C1336_000040014"
FT                   /note="C1336_000040014 identified by Glimmer3 with a raw
FT                   score of 5.69."
FT   CDS             complement(196377..196784)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040014"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040014 identified by Glimmer3 with a raw
FT                   score of 5.69. Gene function extrapolated from CJE0153
FT                   (CP000025.1) after blastn alignment (99.31 percent identity
FT                   over a 145 bp alignment) - for clarity, the original
FT                   product name 'membrane protein, putative' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31605.1"
FT                   /translation="MDQSYEFFLALHLYSLYASGFLMLFYLILTQGNFKTEFIFIRRIR
FT                   LFLPIYYLFLALIIFTGCLLSAMKQFQMNVNIWVMIFSWILIFALAIFHFVCFKKARRF
FT                   RKYATFRWISCLILPFEIFLLFLPFLIERYL"
FT   gene            complement(196784..197209)
FT                   /locus_tag="C1336_000040015"
FT                   /note="C1336_000040015 identified by Glimmer3 with a raw
FT                   score of 12.67."
FT   CDS             complement(196784..197209)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040015"
FT                   /product="cytochrome c family protein"
FT                   /note="C1336_000040015 identified by Glimmer3 with a raw
FT                   score of 12.67. Gene function extrapolated from
FT                   CJJ81176_0194 (CP000538.1) after blastn alignment (99.64
FT                   percent identity over a 280 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31606.1"
FT                   /translation="MQKAKILIALSFFLLVLSACSNDEKNISKTQNTDQEVVQIEQNDE
FT                   KTELSDSNLPLPVDDEAQSSDDEHEANPTIINSLYKQKCATCHGEKGELKPKNSTAIKT
FT                   LGNKIFIQKIKTIKDKNHSFLSDEQIQNLADFINKGK"
FT   gene            complement(197209..197790)
FT                   /locus_tag="C1336_000040016"
FT                   /note="C1336_000040016 identified by Glimmer3 with a raw
FT                   score of 10.51."
FT   CDS             complement(197209..197790)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040016"
FT                   /product="6-pyruvoyl tetrahydrobiopterin synthase"
FT                   /note="C1336_000040016 identified by Glimmer3 with a raw
FT                   score of 10.51. Gene function extrapolated from CJE0155
FT                   (CP000025.1) after blastn alignment (99.66 percent identity
FT                   over a 582 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31607.1"
FT                   /translation="MIIRKLFEFENAHIVRFCSSKRCKSSIHGHSYKVEVLLESKYLDN
FT                   AGMVYDFGLLKTYIRQIIDSFDHAITLFKYDDAKYLEEMKKYSSRWICLPVNVSAENFC
FT                   RVFFILIDALLKQTKMVNGEQGVTLQSIIVHETRTGYAQGFREDAYSELMPKISLQDIE
FT                   FSNGIKAEWNDIDFYNKLKNEEIFINPKEI"
FT   gene            complement(197787..198531)
FT                   /locus_tag="C1336_000040096"
FT                   /note="Features C1336_000040017, C1336_000040018 joined to
FT                   form C1336_000040096 to correct 454 sequencing error
FT                   (C1336_000040017 identified by Glimmer3 with a raw score of
FT                   7.10, C1336_000040018 identified by Glimmer3 with a raw
FT                   score of 11.90)."
FT   CDS             complement(join(197787..197882,197884..198531))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040096"
FT                   /product="radical SAM domain protein"
FT                   /note="Features C1336_000040017, C1336_000040018 joined to
FT                   form C1336_000040096 to correct 454 sequencing error
FT                   (C1336_000040017 identified by Glimmer3 with a raw score of
FT                   7.10, C1336_000040018 identified by Glimmer3 with a raw
FT                   score of 11.90). Gene function extrapolated from
FT                   CJJ81176_0196 (CP000538.1) after blastn alignment (99.02
FT                   percent identity over a 205 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31608.1"
FT                   /translation="MQLVESFLSIQGEGKYNGKLAIFMRFAGCNFNCLGFNVKISKNNK
FT                   TLIGCDTMRAVFTKDFKESYETLNANELLKRVIKLKQGFNPIVVITGGEPLIHYENPEF
FT                   IEFIQMLLKNKFEIHFESNGSIEIDFDRYPFYKECIFALSVKLQNSGIKKDKRLNFKAL
FT                   KAFKNYAKDSFYKFVLNANTLDNSFLEINEILKEAPNQIFCMPMGENEQNLKKNAQKIA
FT                   EFCIKNGYNYSDRIHIRLWNNKEGV"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(198534..199496)
FT                   /locus_tag="C1336_000040019"
FT                   /note="C1336_000040019 identified by Glimmer3 with a raw
FT                   score of 10.87."
FT   CDS             complement(198534..199496)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040019"
FT                   /product="molybdenum cofactor biosynthesis protein A"
FT                   /note="C1336_000040019 identified by Glimmer3 with a raw
FT                   score of 10.87. Gene function extrapolated from C8J_0158
FT                   (CP000814.1) after blastn alignment (99.13 percent identity
FT                   over a 575 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31609.1"
FT                   /translation="MLIDQFGRKINYLRISVTQRCNFRCLYCMPKIPFDYQPKENLLSF
FT                   EELFLFIKAAIDEGIEKIRITGGEPLLRKDLSIFIKMISDYKSDIDLAITTNGFLLKDF
FT                   AKDLKNAGLKRLNISLDTLDHKKAKTLAQKDVLDSVLSGIDEALNLDLKVKLNTVALKN
FT                   LNDDELISLLEFAKSKKAQIRFIEFMENTHAYGKLQGLKRDEIIQILSQKYQIQLIKKD
FT                   EKAPVSIYKADDYEFGIIDPHSHEFCDSCNRIRLSAEGLLIPCLYFDEALSIKEAVRKG
FT                   DIKAAVEILQEVLRNKPEKNKWSVVDNKTSSRAFYQTGG"
FT   gene            complement(199509..200024)
FT                   /locus_tag="C1336_000040020"
FT                   /note="C1336_000040020 identified by Glimmer3 with a raw
FT                   score of 15.20."
FT   CDS             complement(199509..200024)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040020"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000040020 identified by Glimmer3 with a raw
FT                   score of 15.20. Gene function extrapolated from C8J_0159
FT                   (CP000814.1) after blastn alignment (99.42 percent identity
FT                   over a 516 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31610.1"
FT                   /translation="MSNDVLYLVFIIVLLIAMLAYMNIKERENNAKIAKLQNVIEDITK
FT                   ELHYFRKELGVKDDSEEDEDYKISLLKEEIMIELDKQISSKITPVLRTLKTMEHIIEDF
FT                   QNEQQNRLLNLEQKAQSMAKLTPNYDTEEQKIENLFKEGKSIEQIAKDLRIGTGNVELV
FT                   LKFKKLIK"
FT   gene            complement(200021..200518)
FT                   /locus_tag="C1336_000040021"
FT                   /note="C1336_000040021 identified by Glimmer3 with a raw
FT                   score of 14.97."
FT   CDS             complement(200021..200518)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040021"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040021 identified by Glimmer3 with a raw
FT                   score of 14.97. Gene function extrapolated from
FT                   CJJ81176_0199 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 201 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31611.1"
FT                   /translation="MELTLFKAGFEAHLECCKIENNRFLGEYLKLGAISQILKWKKLAL
FT                   RIDFDEGEKIIFDLLLSLKEDILRLENSLDKNKELIPLKQKGVVESLNFEYLNFLDTIL
FT                   EEDKEYYLRFDLNNQKIAIFIKAQSQTLAKIIKIKPEDKMAFDAFVVEIQRNMIRNKKG
FT                   QE"
FT   gene            complement(200509..201393)
FT                   /locus_tag="C1336_000040022"
FT                   /note="C1336_000040022 identified by Glimmer3 with a raw
FT                   score of 10.61."
FT   CDS             complement(200509..201393)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040022"
FT                   /product="4-hydroxybenzoate octaprenyltransferase,
FT                   putative"
FT                   /note="C1336_000040022 identified by Glimmer3 with a raw
FT                   score of 10.61. Gene function extrapolated from CJE0160
FT                   (CP000025.1) after blastn alignment (99.51 percent identity
FT                   over a 206 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31612.1"
FT                   /translation="MNTFWIKFKDILELVVFKHSIFALPFLFSSMIVASKLANDTAWFG
FT                   FKALILGIICAVSARNFAMATNRLMDEDIDKDNPRCANRPNVSGKIGRKSVWIFIIINA
FT                   LIFILCSYFINTLAFYLSFPVLFVLAIYSAFKRFSSLAHLVLGFCLGLAPIAGSVIIMG
FT                   EIHIYSVILCLGVTFWTAGFDLLYSLQDMEYDKKIGLHSIPAKFGSKATLFISAFCHIL
FT                   AVLFWLLFVWEVWGVALGKIALTGVIISGIILALEHKIVHKNFAHIDRAFFTLNGYLSI
FT                   IFFIFIWIDLLWN"
FT   gene            201464..202333
FT                   /locus_tag="C1336_000040023"
FT                   /note="C1336_000040023 identified by Glimmer3 with a raw
FT                   score of 13.82."
FT   CDS             201464..202333
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040023"
FT                   /product="tRNA delta(2)-isopentenylpyrophosphate
FT                   transferase"
FT                   /note="C1336_000040023 identified by Glimmer3 with a raw
FT                   score of 13.82. Gene function extrapolated from Cj0166
FT                   (AL111168.1) after blastn alignment (99.54 percent identity
FT                   over a 870 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31613.1"
FT                   /translation="MFFEIALIGTTASGKTYIANTLAREFNAVVLSLDSLCVYKEINIA
FT                   SAKPSQDDLASIKYFGVNLLSVNEHFNVELFIREYQKAKEFALARNLPLIIVGGTGFYL
FT                   KTMIDGLSEKTLESKSSLNNDEIYALLLNIDPNYKIEKNDTYRLKKWLGIYEQTREIPS
FT                   EFLKRTQKTGVLKDIEIYELAWDKEILKKRIKTRTKEMLDNGLLDEAKILFSKFDHKLK
FT                   ALNSIGLKECKEYLDGEISFKELENLITIHTTQLAKRQRTFNKKFQSKALEFDKALATL
FT                   RMKFSIEK"
FT   gene            complement(202319..202882)
FT                   /locus_tag="C1336_000040024"
FT                   /note="C1336_000040024 identified by Glimmer3 with a raw
FT                   score of 9.75."
FT   CDS             complement(202319..202882)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040024"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000040024 identified by Glimmer3 with a raw
FT                   score of 9.75. Gene function extrapolated from C8J_0163
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 128 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31614.1"
FT                   /translation="MDFYSLIFLSCGLGMDTFAVSLCKGFSVKKLHLKHYLIVGIYFGG
FT                   FQALMPTIGYFIGITFASFIASIDHWIAFILLSLIGLKMIKESLENENCDSNANQFGFK
FT                   TMLALAIATSIDALAVGVSFAFLNVNLLLAIFLIGIITFILCIIALKIGNKFGIYLKNK
FT                   AELLGGLVLIILGVKILIEHLFFD"
FT   gene            203030..203104
FT                   /locus_tag="C1336_000040097"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            203030..203104
FT                   /locus_tag="C1336_000040097"
FT                   /product="tRNA-Glu"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(203240..203422)
FT                   /locus_tag="C1336_000040025"
FT                   /note="C1336_000040025 identified by Glimmer3 with a raw
FT                   score of 13.16."
FT   CDS             complement(203240..203422)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040025"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040025 identified by Glimmer3 with a raw
FT                   score of 13.16. Gene function extrapolated from
FT                   CJJ81176_0204 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 95 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31615.1"
FT                   /translation="MKKVVLISALLGAFAANVFAANTPSDVNQTHTKAHHSKAKADKKH
FT                   EAKTHKKTKEQTPAQ"
FT   gene            203690..204352
FT                   /locus_tag="C1336_000040026"
FT                   /note="C1336_000040026 identified by Glimmer3 with a raw
FT                   score of 13.14."
FT   CDS             203690..204352
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040026"
FT                   /product="superoxide dismutase (Fe)"
FT                   /note="C1336_000040026 identified by Glimmer3 with a raw
FT                   score of 13.14. Gene function extrapolated from C8J_0165
FT                   (CP000814.1) after blastn alignment (98.79 percent identity
FT                   over a 663 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31616.1"
FT                   /translation="MFELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKDT
FT                   EFAGKDLVSIIKTSNGGVFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALE
FT                   KEFGSLENFKAEFIKGATGVFGSGWFWLVYNTKNQKLEFVGTSNAATPITEDKVPLLVV
FT                   DVWEHAYYVDHRNARPAYLEKFYAHINWEFVAKAYEWALKEGMGSVSFYANELHPIK"
FT   gene            204421..204927
FT                   /locus_tag="C1336_000040027"
FT                   /note="C1336_000040027 identified by Glimmer3 with a raw
FT                   score of 10.93."
FT   CDS             204421..204927
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040027"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040027 identified by Glimmer3 with a raw
FT                   score of 10.93. Gene function extrapolated from Cj0170
FT                   (AL111168.1) after blastn alignment (98.99 percent identity
FT                   over a 494 bp alignment). Similar to Cj0170."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31617.1"
FT                   /translation="MDNSLSAYTQKYDKEGYGLQYPDGHVIRFYERILKYKLSKTSGKL
FT                   LDFGCGNGVHSKYFKNITGGGIEPYGIDIVPSLKKVWEKDPCLDSKNFHIISPNSSFKK
FT                   LFNTKMDFIFANQSLYYLTKQAFKEAVQEFYELCNEGAIIFATMMSDKGYSMYERGELM
FT                   DKWLT"
FT   gene            204953..205111
FT                   /locus_tag="C1336_000040028"
FT                   /note="C1336_000040028 identified by Glimmer3 with a raw
FT                   score of 4.42."
FT   CDS             204953..205111
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040028"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040028 identified by Glimmer3 with a raw
FT                   score of 4.42. Gene function extrapolated from
FT                   JJD26997_0185 (CP000768.1) after blastn alignment (99.37
FT                   percent identity over a 159 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31618.1"
FT                   /translation="MSGSSYIRFTKDIEELKEDFKPFKPLFWGDYELINLYNFEGSVEH
FT                   FIYIGQK"
FT   gene            complement(205124..206329)
FT                   /locus_tag="C1336_000040029"
FT                   /note="C1336_000040029 identified by Glimmer3 with a raw
FT                   score of 14.72."
FT   CDS             complement(205124..206329)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040029"
FT                   /product="putative saccharopine dehydrogenase"
FT                   /note="C1336_000040029 identified by Glimmer3 with a raw
FT                   score of 14.72. Gene function extrapolated from Cj0172c
FT                   (AL111168.1) after blastn alignment (97.51 percent identity
FT                   over a 1206 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31619.1"
FT                   /translation="MKNLLIIGAGGVSRVATVKCAMNSDTFCKITLASRTKSKCDEIAA
FT                   FIKERLGVQIETAQIDADDSNAVVELIKKTGAQILLNVALPYQDLSLMDACIKAGINYV
FT                   DTANYEHPDLAKFEYKEQWARNDEFKQAEILGLLGSGFDPGVTNVFCAYAQQNLFDEIS
FT                   YIDILDCNAGDHGYAFATNFNPEINLREVSAKGRYWENGKWIETEPMEIKIQWDYPEVG
FT                   VKDSYLLYHEELESLVKNIKGLKRIRFFMTFGQSYLTHMKCLENVGMLGIKPVIHQGKE
FT                   IIPIEFLKTLLPDPASLGPRTKGYTNIGCVIRGKKDGKDKQVYIYNVCNHEECYKETGA
FT                   QAVSYTTGVPAMIGTKLIAKGIWQGKGVFNMEEFDAKPFMEELNSQGLPWKIIEMTPSL
FT                   GE"
FT   gene            complement(206365..207270)
FT                   /locus_tag="C1336_000040030"
FT                   /note="C1336_000040030 identified by Glimmer3 with a raw
FT                   score of 13.63."
FT   CDS             complement(206365..207270)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040030"
FT                   /product="iron transport system ATP-binding protein"
FT                   /note="C1336_000040030 identified by Glimmer3 with a raw
FT                   score of 13.63. Gene function extrapolated from C8J_0167
FT                   (CP000814.1) after blastn alignment (98.68 percent identity
FT                   over a 906 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31620.1"
FT                   /translation="MLEIKNLSKNFGKIQALENINLHVKEGEFLSILGGSGSGKSTLLR
FT                   IIAKLEQASSYDLFSCKGEVALMFQNYALFPHLNVEKNILFALYDKKDKNQILNHLLKT
FT                   FEIEDLRYKKIDEISGGQAQRVAFARAIARGCKLLLLDEPFSNLDQNLKQDLRRELKKM
FT                   IENQGITAIMVTHDIEDAYCMSDQIAFLEKGKILTHANPKELYFKPDFKSAQILPDLNI
FT                   IEEKLDLEDEFFAWIASKNYIFGYAELKIGNRFEAKILQKEFLGAFYRIKLRYKNIEFF
FT                   MLLSSNYNLEEKINFDIINF"
FT   gene            complement(207257..208873)
FT                   /locus_tag="C1336_000040031"
FT                   /note="C1336_000040031 identified by Glimmer3 with a raw
FT                   score of 8.05."
FT   CDS             complement(207257..208873)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040031"
FT                   /product="iron ABC transporter, permease protein"
FT                   /note="C1336_000040031 identified by Glimmer3 with a raw
FT                   score of 8.05. Gene function extrapolated from CJE0167
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 234 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31621.1"
FT                   /translation="MYKTLKYYKLGAILLALFLALPIFGIFAELFYILFQNFNTSDLTQ
FT                   FSSIKENLSHFFDYLFLKFIKDTFIISMGVLCLSLILGVSSAYLIANYDFYFCKILEKL
FT                   LILPLAIPAYILAFVYVGIMDFQGFFHENFGFRIDFFNHYGVIFVLAISLYPYIYLFAK
FT                   TAFKSEAKEAYEVAKIMKYSEFRIFTRVALLSARPAIFSGALLVLMETLSDYGASAYLG
FT                   VDTFSAGIFKLWYDLNDSYSSSVLSGILMLFVFLIMYVDYYYKNKHHYSFNQNLALFIK
FT                   KRKLNPIKQILSCIYCFMIAFVGFILPFIWLVYWGLKDHKLFESQFYIISFQTIILALI
FT                   TALITTFLAYFLMFSSRIVKNHFFNLFILKISSLGYSIPAAALGISIIVLFVFLDKFFH
FT                   MSLLGNSLLVLVFAYIIRFLASAIYSLEGGYNKIHLNIDEASLNLRTSYFILFFKIHAP
FT                   LMKHFLFLAFIIVFIDTIKELPLSRILAPFGFETLSVKAFWFASDERIYDAALPSLFIV
FT                   FLSLMVVVWMDKITRKDDVRN"
FT   gene            complement(208873..209877)
FT                   /locus_tag="C1336_000040032"
FT                   /note="C1336_000040032 identified by Glimmer3 with a raw
FT                   score of 14.37."
FT   CDS             complement(208873..209877)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040032"
FT                   /product="putative iron-uptake ABC transport
FT                   system,periplasmic iron-binding protein"
FT                   /note="C1336_000040032 identified by Glimmer3 with a raw
FT                   score of 14.37. Gene function extrapolated from Cj0175c
FT                   (AL111168.1) after blastn alignment (98.19 percent identity
FT                   over a 995 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31622.1"
FT                   /translation="MKKIFFMFLTAVSFLGASELNIYSARHYDADFEIIKKFEEKTGIK
FT                   VNHTQAKASELIKRLSLEGNNSPADIFITADISNLTEAKNLGLLSPVSSKYLEEFIPAH
FT                   LRDKDKEWFAITKRARIIAYNKNANIDISKMKNYEDLAKAEFKGEIVMRSATAPYSKTL
FT                   LASIIANDGSKEAKAWAKGVLENLATNPKGGDRDQARQVFAGEAKFAVMNTYYIGLLKN
FT                   SKNLKDVEVGNSLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKI
FT                   LTDSNYEFPIRNDVELSQTVKDFGTFKEDQIPVSKIAENIKEAVKIYDEVGFR"
FT   gene            complement(209888..210004)
FT                   /locus_tag="C1336_000040033"
FT                   /note="C1336_000040033 identified by Glimmer3 with a raw
FT                   score of 6.64."
FT   CDS             complement(209888..210004)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040033"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040033 identified by Glimmer3 with a raw
FT                   score of 6.64. Gene function extrapolated from C8J_0170
FT                   (CP000814.1) after blastn alignment (99.01 percent identity
FT                   over a 101 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31623.1"
FT                   /translation="MPMKKIILFLLCFGFAFACSEHSHTDFKDLNKTEYNSQ"
FT   gene            210197..211396
FT                   /locus_tag="C1336_000040034"
FT                   /note="C1336_000040034 identified by Glimmer3 with a raw
FT                   score of 12.32."
FT   CDS             210197..211396
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040034"
FT                   /product="putative transmembrane transport protein"
FT                   /note="C1336_000040034 identified by Glimmer3 with a raw
FT                   score of 12.32. Gene function extrapolated from Cj0182
FT                   (AL111168.1) after blastn alignment (98.37 percent identity
FT                   over a 490 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31624.1"
FT                   /translation="MFSSFFASKKWALWAYLGLFLLLFFLFIQTSLNVAINSWYSDFYN
FT                   VLQKPKIELLDSNSTQKIETNFENNATLIQEANQRAEQNFQKANFINKGALYYYQNLLE
FT                   YFFNSRAMIEKPNYSANDFYALILVFLAIAIPYVLIATINIYFASVYAFKWREAMTFSY
FT                   LKFWKNKDDNIEGSSQRIQEDTYNFSKIVESLGLSFIKALMTLVAFIPILWSLSDVVSK
FT                   ALFANLSENSSFYFLKNIDGLLVYIALLISLGGLVVSWFVGIKLPGLEYNNQKAEAAFR
FT                   KELVYAEDNRKEYAKNETMIELFTGLKFNYKRLFLHYGYFNIWLILFEQMIVIVPFLIM
FT                   APGLFAGAIGLGIVMQINNAFDQVRSSFSVFITNWTTITQLRSIYKRLKEFEKNISYKS
FT                   "
FT   gene            211497..212855
FT                   /locus_tag="C1336_000040035"
FT                   /note="C1336_000040035 identified by Glimmer3 with a raw
FT                   score of 12.44."
FT   CDS             211497..212855
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040035"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040035 identified by Glimmer3 with a raw
FT                   score of 12.44. Gene function extrapolated from C8J_0172
FT                   (CP000814.1) after blastn alignment (99.19 percent identity
FT                   over a 1359 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31625.1"
FT                   /translation="MDPSQVLDLNQTSTASFDAGYSILMVVVALALVFLNGFFVLSEFS
FT                   IVKVRRSKLEEMVKEKKAGAKKALEVTSRLDTYLSACQLGITLSSLALGWIGEPAIAKM
FT                   LEIPLINLGFSTVIIHTIAFIIAFSIITLLHVVLGELVPKSIAIAVADKAVLFIARPLH
FT                   WFWILFLPCIKIFDFLAAISLKLFGIKPAKESELTHSEEEIKIIASESQKGGVLDEFET
FT                   EIIRNAVDFSDTVAKEIMTPRKDMICLNKQKSYEENMQIICEHKHTRFPYIDGSKDTIL
FT                   GMIHIRDIIQNELSHKSQNLDTFVKPLILVPENISISKVLVMMNKERSHTALVVDEYGG
FT                   TAGILTMEDIMEEIIGEIKSEHEEDSYKKLAENIYEFQGRCDIETVEEMLVINYDEDLE
FT                   QVTIGGYVFNLLGRLPIVGDRIEDELCYYEVKKMDGNSIERVKVVKKTNKDEE"
FT   gene            complement(212868..214052)
FT                   /locus_tag="C1336_000040036"
FT                   /note="C1336_000040036 identified by Glimmer3 with a raw
FT                   score of 10.10."
FT   CDS             complement(212868..214052)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040036"
FT                   /product="Ser/Thr protein phosphatase family protein"
FT                   /note="C1336_000040036 identified by Glimmer3 with a raw
FT                   score of 10.10. Gene function extrapolated from
FT                   CJJ81176_0215 (CP000538.1) after blastn alignment (99.52
FT                   percent identity over a 413 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31626.1"
FT                   /translation="MRILLVLRGNYYAGQEEFIKNNKLQNYTLDLNALRLLSGSVKNIV
FT                   SEYKILNVKNDEDLSKILLKLLEMRMQKGEFCIINAYNETLKIYKDLAKQHRYKMYVIV
FT                   FDSSLKQCQEKNLLEAKKNGYIIPYALLEKTQDLLKKNLKKYPILDSSDWKKCLYQMPN
FT                   LSKYKKIHHIGDLQGCYSVLKEYIKTIKEDEFYIFLGDYINRGIENGKVIKFLLKICEK
FT                   ENVCLLEGNHERHLIKWANGELSNSKEFNENTLKDFRKEKLTPRDARKLYPHLKECLYY
FT                   KFQNKFIFCSHGGVNFIPSKPEKISFIPSHDFIYGVGGYEDSQKVANQFCNFTSDNLYQ
FT                   IFGHRNKEKLPMKIAKRVFLCEGKIDDGGYLRVVTLDKKGFECIEIKNQIYKKK"
FT   gene            complement(214062..214271)
FT                   /locus_tag="C1336_000040037"
FT                   /note="C1336_000040037 identified by Glimmer3 with a raw
FT                   score of 15.16."
FT   CDS             complement(214062..214271)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040037"
FT                   /product="phnA-like protein"
FT                   /note="C1336_000040037 identified by Glimmer3 with a raw
FT                   score of 15.16. Gene function extrapolated from C8J_0174
FT                   (CP000814.1) after blastn alignment (99.52 percent identity
FT                   over a 210 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31627.1"
FT                   /translation="MAKDANGTELNAGDSVSVIKDLKVKGASTTLKRGTTIKNIKLTSK
FT                   EGEIEARVDKFGVIVLKTEFLKKI"
FT   gene            complement(214264..214983)
FT                   /locus_tag="C1336_000040038"
FT                   /note="C1336_000040038 identified by Glimmer3 with a raw
FT                   score of 11.43."
FT   CDS             complement(214264..214983)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040038"
FT                   /product="integral membrane protein, TerC family"
FT                   /note="C1336_000040038 identified by Glimmer3 with a raw
FT                   score of 11.43. Gene function extrapolated from C8J_0175
FT                   (CP000814.1) after blastn alignment (98.73 percent identity
FT                   over a 706 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31628.1"
FT                   /translation="MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHRD
FT                   KGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKSIK
FT                   EIKVQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMIIAVI
FT                   IAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTAMAFA
FT                   LVVQILNILDQRKEKNG"
FT   gene            complement(215056..215622)
FT                   /locus_tag="C1336_000040039"
FT                   /note="C1336_000040039 identified by Glimmer3 with a raw
FT                   score of 16.87."
FT   CDS             complement(215056..215622)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040039"
FT                   /product="phosphoribosylglycinamide formyltransferase"
FT                   /note="C1336_000040039 identified by Glimmer3 with a raw
FT                   score of 16.87. Gene function extrapolated from C8J_0176
FT                   (CP000814.1) after blastn alignment (97.61 percent identity
FT                   over a 460 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31629.1"
FT                   /translation="MLVKLAILFSGNGSNLENILEKLHKKTIGENTYEVVLCLCNKKDA
FT                   FGIQRAKKFGLDTIIVDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFTKN
FT                   IKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVNEELDGGMIIAQKAFEKRNLS
FT                   FEEFEEKIHSLEHEILPLSVIEIFS"
FT   gene            complement(215613..216983)
FT                   /locus_tag="C1336_000040040"
FT                   /note="C1336_000040040 identified by Glimmer3 with a raw
FT                   score of 16.32."
FT   CDS             complement(215613..216983)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040040"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040040 identified by Glimmer3 with a raw
FT                   score of 16.32. Gene function extrapolated from C8J_0177
FT                   (CP000814.1) after blastn alignment (98.18 percent identity
FT                   over a 932 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31630.1"
FT                   /translation="MKAIIDNINILEQNAINKGLDDLILMENAGLNLAKLIKKEAKKIC
FT                   IQRKIKKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYAFK
FT                   FCKKEPNFKKFHIIIDCILGTGLNRCLDEKTSLIIQKVNQSKALKIACDMPTNLGFYPC
FT                   FKADITLCMGALKEILLEDFAKEFVGRIKIANLGISSKKFYPNSQAFLLEKKDLKTIDR
FT                   KINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKIENNAS
FT                   AIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKEFIKLYK
FT                   MCFDEDLDIEALQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLGNQALAKG
FT                   GSGDVLSGMIATHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLIKGLKCL"
FT   gene            complement(216967..217665)
FT                   /locus_tag="C1336_000040041"
FT                   /note="C1336_000040041 identified by Glimmer3 with a raw
FT                   score of 12.58."
FT   CDS             complement(216967..217665)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040041"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040041 identified by Glimmer3 with a raw
FT                   score of 12.58. Gene function extrapolated from
FT                   CJJ81176_0220 (CP000538.1) after blastn alignment (98.23
FT                   percent identity over a 621 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31631.1"
FT                   /translation="MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQK
FT                   NIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSDYT
FT                   SLIQKLRENKKQVVGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALINITE
FT                   QLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREKNIYF
FT                   LVKKDYESYY"
FT   gene            complement(217667..219172)
FT                   /locus_tag="C1336_000040042"
FT                   /note="C1336_000040042 identified by Glimmer3 with a raw
FT                   score of 11.11."
FT   CDS             complement(217667..219172)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040042"
FT                   /product="Mg chelatase-related protein"
FT                   /note="C1336_000040042 identified by Glimmer3 with a raw
FT                   score of 11.11. Gene function extrapolated from C8J_0179
FT                   (CP000814.1) after blastn alignment (99.71 percent identity
FT                   over a 339 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31632.1"
FT                   /translation="MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASVAIKESVER
FT                   IKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGELGL
FT                   DGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEFFKE
FT                   KNYENFRFSHNHPLFASPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACIIAALGMHNI
FT                   LFEGSPGSGKSMCAKRLVYIMPPQSLSEILMQNAYMSLDSKDCEFTKIRAFRHPHHTST
FT                   RASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDYKIHISRVNSKI
FT                   TYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIIDRIDLYVAMDEIS
FT                   KDDKTSISSKEMSEKILQAFIFGKKRGQKEFNGKLKDEDLSRFCVLEKDAKDTLDLAIS
FT                   RYNLSLRSLNKILKVSRSIADLEQSLNINKTHILEALSFRARN"
FT   gene            complement(219169..219696)
FT                   /locus_tag="C1336_000040043"
FT                   /note="C1336_000040043 identified by Glimmer3 with a raw
FT                   score of 15.82."
FT   CDS             complement(219169..219696)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040043"
FT                   /product="peptide deformylase"
FT                   /note="C1336_000040043 identified by Glimmer3 with a raw
FT                   score of 15.82. Gene function extrapolated from CJE0184
FT                   (CP000025.1) after blastn alignment (97.76 percent identity
FT                   over a 446 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31633.1"
FT                   /translation="MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGVG
FT                   LAAIQVDIPLRALLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDFFE
FT                   EVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKFDKE
FT                   FKKKKKNHKKEK"
FT   gene            complement(219732..220316)
FT                   /locus_tag="C1336_000040044"
FT                   /note="C1336_000040044 identified by Glimmer3 with a raw
FT                   score of 15.59."
FT   CDS             complement(219732..220316)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040044"
FT                   /product="ATP-dependent Clp protease, proteolytic subunit
FT                   ClpP"
FT                   /note="C1336_000040044 identified by Glimmer3 with a raw
FT                   score of 15.59. Gene function extrapolated from CJE0185
FT                   (CP000025.1) after blastn alignment (98.85 percent identity
FT                   over a 87 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31634.1"
FT                   /translation="MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVA
FT                   QLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLS
FT                   CGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVTK
FT                   IAKDTERDFFMSAQEAKEYGLIDKVLEKSFK"
FT   gene            complement(220316..221650)
FT                   /locus_tag="C1336_000040045"
FT                   /note="C1336_000040045 identified by Glimmer3 with a raw
FT                   score of 18.90."
FT   CDS             complement(220316..221650)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040045"
FT                   /product="trigger factor"
FT                   /note="C1336_000040045 identified by Glimmer3 with a raw
FT                   score of 18.90. Gene function extrapolated from
FT                   CJJ81176_0224 (CP000538.1) after blastn alignment (99.51
FT                   percent identity over a 203 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31635.1"
FT                   /translation="MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFR
FT                   PGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKESKELVGEPYFEKFDRKDGE
FT                   IIAELILSFKPEIKLEGYEKLIPEYQTPKVGKKEIDEKKDELLKRFATPEAIKTKRALK
FT                   EGDFAKFDFEGFVDDKAFEGGKSENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFP
FT                   KEYGAAHLAGKDAVFKVKLHEIQELKIPELDEEMLKKLLPGEEKASVEVLDEKLKEQIK
FT                   NEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKAS
FT                   KEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEH
FT                   LENYKKQGALPAVKMALIEEKLFNDIFMPKTEKSEKASKKEKEDK"
FT   gene            221793..222365
FT                   /locus_tag="C1336_000040046"
FT                   /note="C1336_000040046 identified by Glimmer3 with a raw
FT                   score of 14.94."
FT   CDS             221793..222365
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040046"
FT                   /product="GTP cyclohydrolase I"
FT                   /note="C1336_000040046 identified by Glimmer3 with a raw
FT                   score of 14.94. Gene function extrapolated from
FT                   CJJ81176_0225 (CP000538.1) after blastn alignment (98.18
FT                   percent identity over a 495 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31636.1"
FT                   /translation="MQKKFEDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQ
FT                   NVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKIPR
FT                   LVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGVQKANSTTTTSA
FT                   LRGIFLKNEKTREEFFSLINSAKQVRF"
FT   gene            222365..223750
FT                   /locus_tag="C1336_000040047"
FT                   /note="C1336_000040047 identified by Glimmer3 with a raw
FT                   score of 13.07."
FT   CDS             222365..223750
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040047"
FT                   /product="flagellum-specific ATP synthase FliI"
FT                   /note="C1336_000040047 identified by Glimmer3 with a raw
FT                   score of 13.07. Gene function extrapolated from
FT                   CJJ81176_0226 (CP000538.1) after blastn alignment (98.34
FT                   percent identity over a 1386 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31637.1"
FT                   /translation="MNLEKLRSKLGKENLSAIFGEITKISATSIEIRGLKTGVGDIVKL
FT                   VSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVV
FT                   DPFMRPKDGKGAIEVSKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGI
FT                   FAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSD
FT                   DSALMRKYGAFCAMSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPP
FT                   SVLSLLPQLMERTGKEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTD
FT                   FGIYPPINIQNSASRVMSDIISAEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKEL
FT                   DEAISKKEFMQKFLGQNPEESFEFNQTLELLSQIDTPNTPLPPTQNINVGSASATLPNP
FT                   NLK"
FT   gene            complement(223753..225090)
FT                   /locus_tag="C1336_000040048"
FT                   /note="C1336_000040048 identified by Glimmer3 with a raw
FT                   score of 16.27."
FT   CDS             complement(223753..225090)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040048"
FT                   /product="amidophosphoribosyltransferase"
FT                   /note="C1336_000040048 identified by Glimmer3 with a raw
FT                   score of 16.27. Gene function extrapolated from
FT                   CJJ81176_0227 (CP000538.1) after blastn alignment (98.95
FT                   percent identity over a 1338 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31638.1"
FT                   /translation="MCAVVGVINSKNASTYAYYALFAMQHRGQEASGISVSNGKNIKTI
FT                   KAKGEVSQIFNPDNLKTLEGKIAIGHNRYSTAGNSSLNDAQPIAATSVLGDIALAHNGN
FT                   LVNKEEVRSRLIQDGAIFQTNMDTENVVHLIARSKQESLKDRFIESLKECIGAYCFVLA
FT                   SKDKLYVVRDPHGVRPLSLGRLKDGGYIVASETCAFDLIEAEFIRDVKPGEMLIFTQGN
FT                   DKFESIELFSQTPRICAFEYIYFARPDSIVEGKSVYEVRKKMGEALAKKFAYKADFVVP
FT                   VPDSGVSAAIGFAQYLQIPLEMAIVRNHYVGRTFIEPTQELRNLKVKLKLNPMRKVLEG
FT                   KEIVVIDDSLVRGTTSKKIISLLRAAGASKIHLAIACPEIKFPDTYGIDTPTFEELISA
FT                   NKNAEEVREYVEADTLSFLSIEELTQSIGDERKYSLISFDGDYFIK"
FT   gene            complement(225092..225820)
FT                   /locus_tag="C1336_000040049"
FT                   /note="C1336_000040049 identified by Glimmer3 with a raw
FT                   score of 18.83."
FT   CDS             complement(225092..225820)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040049"
FT                   /product="dihydrodipicolinate reductase"
FT                   /note="C1336_000040049 identified by Glimmer3 with a raw
FT                   score of 18.83. Gene function extrapolated from C8J_0186
FT                   (CP000814.1) after blastn alignment (97.81 percent identity
FT                   over a 729 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31639.1"
FT                   /translation="MIKIGIYGAKGRMGKQIEECLKSETQAQISILYNKGGNLEELFEK
FT                   SDVIIDFSSPSGTHELLNYARTMPKPLVIGTTGLDEKILHLMQSASEVMPIFYATNMSL
FT                   GVAVLNYLASKASQMLRNFDIEILEMHHRHKKDAPSGTAMTLAQSVAKARNLELEKVRV
FT                   SGRDGIIGERSKDEIAVMSLRGGDIVGRHTVGFYEDGEFLELNHTATSRATFAKGAIKI
FT                   AIWLSKQEAKMYSINDFLGI"
FT   gene            complement(225883..227064)
FT                   /locus_tag="C1336_000040050"
FT                   /note="C1336_000040050 identified by Glimmer3 with a raw
FT                   score of 14.53."
FT   CDS             complement(225883..227064)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040050"
FT                   /product="ATPase, AAA family protein"
FT                   /note="C1336_000040050 identified by Glimmer3 with a raw
FT                   score of 14.53. Gene function extrapolated from CJE0191
FT                   (CP000025.1) after blastn alignment (99.24 percent identity
FT                   over a 1182 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31640.1"
FT                   /translation="MSLALTFRPENFDDILGQYELIEIFKKFTALQKLPHSIFFGTAGS
FT                   GKTTFARVVAKEFGLDFYEFDGGNFKLEELRKILDNYKNSLYKPLIFIDEIHRLSKTQQ
FT                   EMLLIPMENYRLILIGASTENPYFVLSSGIRSRSMLFEFKSLGVKELETLLLRVQEKMK
FT                   FSIDKEAKDFLLKSADARAMLNLLEFVLVLDEKHISLENLKKLRNTINSEGVSSKDTHY
FT                   ILASAMIKSLRGSDVDAAIYYLARLIDAGESADFIARRLVIFSSEDVGNADPNALNLAV
FT                   STLEAVKNIGYPEARIILAQCVVYLASTIKSNASYKAINEALNYVKNNEALEIPNYLNN
FT                   NHQEKQNYLYPHDFGGWVEQKYLSKNLKFYHSKGLGEEAKLLDNLYKLKNYKA"
FT   gene            complement(227064..228191)
FT                   /locus_tag="C1336_000040051"
FT                   /note="C1336_000040051 identified by Glimmer3 with a raw
FT                   score of 7.04."
FT   CDS             complement(227064..228191)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040051"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040051 identified by Glimmer3 with a raw
FT                   score of 7.04. Gene function extrapolated from C8J_0188
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 119 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31641.1"
FT                   /translation="MKKWIFIVFCFILGFIIHIFYIGYTNELLFNKFIKNSNPDYTITD
FT                   IYFKKGFLTSKGSFTLNHSHTQLSTKINLKFNNYFFLNKIIKGNFTNPFDFLDEALKNN
FT                   KLGTFTLKLHDNNSKIFLNIKDINLSNEGGDTIINGGYIEALMNKNLEIKNIKIHFDMI
FT                   DFSQFYTKFVLQNLNYEQFFNNPVQFYELNLFSDSQQEINFDYLVLDNNKINSFYSKNQ
FT                   VNFNEENSTINLNIQGKSNEINIDLKSLLGQNLNFDKTKFNITINKFLNSNFNISHFIQ
FT                   KNLDLKIQNLILEKNKQNISLQGNLNINNSYQAKLQVISSDEPDEIFPWTKDYGGLNQY
FT                   FLKENNNFFLNLSYDSLANPQLKINGSEFSNMDLN"
FT   gene            complement(228326..228673)
FT                   /locus_tag="C1336_000040052"
FT                   /note="C1336_000040052 identified by Glimmer3 with a raw
FT                   score of 14.22."
FT   CDS             complement(228326..228673)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040052"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000040052 identified by Glimmer3 with a raw
FT                   score of 14.22. Gene function extrapolated from C8J_0189
FT                   (CP000814.1) after blastn alignment (99.41 percent identity
FT                   over a 338 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31642.1"
FT                   /translation="MKKSILFTSALLASSMLFADSLKLEGTIAQIYDNNKTLLIDSIYG
FT                   GQMAIKVLPNTEIEMDDCGIFGTDKDGTFKDLQVGNFLESKISYGTPATPNTQAIPVAR
FT                   KIEIQCYKKAY"
FT   gene            228989..230338
FT                   /locus_tag="C1336_000040053"
FT                   /note="C1336_000040053 identified by Glimmer3 with a raw
FT                   score of 11.75."
FT   CDS             228989..230338
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040053"
FT                   /product="putative citrate transporter"
FT                   /note="C1336_000040053 identified by Glimmer3 with a raw
FT                   score of 11.75. Gene function extrapolated from Cj0203
FT                   (AL111168.1) after blastn alignment (99.12 percent identity
FT                   over a 1017 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31643.1"
FT                   /translation="MEIFLALLGFFSLGLIVWLLLKDYTTPALAFISVSISVACILLIL
FT                   EQLGFGVGAALGVKEGGVFDIKTLVAFIKDGVKSVTDTAALFVFSILFFSVLNASGFFT
FT                   KILNAFLSKMKANVYQVCILTVFITAAVHLDGSGASTFLIVIPALLPIYERLGIRKTSM
FT                   LLIITSAMGVMNVIPWGGPTLRAATNIGMDANLLWHHIIPIQIVGLVLSLLLAIWIAKI
FT                   EIKRGAGAGNLSGINLNIEKSEHHNEKWFWLNLLVAIGVIGLLISGIFPSYICFMIGLA
FT                   IILPLNYPNLKIAKKVLDRASAGAMLMYITLIGAGILIGVFDKSGIMEKMGVLILNFVP
FT                   DYLGAYIPLMVGILAVPMAIIFCTDSYFYGVMPIVLSVTKAFGAEPLTIAIIMVIARNC
FT                   ATFISPVVPATLLGCGLAEVNIKDHIKRSFFYIWGISIICLIFAEVAGII"
FT   gene            230525..232519
FT                   /locus_tag="C1336_000040054"
FT                   /note="C1336_000040054 identified by Glimmer3 with a raw
FT                   score of 13.75."
FT   CDS             230525..232519
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040054"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000040054 identified by Glimmer3 with a raw
FT                   score of 13.75. Gene function extrapolated from C8J_0193
FT                   (CP000814.1) after blastn alignment (98.91 percent identity
FT                   over a 920 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31644.1"
FT                   /translation="MYKKQNLPELTLRGLILGSILTIIFTASNVYLGLKVGLTFSSSIP
FT                   AVVISMAVLSLFKTSNILENNMVQTQASAAGTLSSVIFVIPGLFMCGYWSEFPLWQTFM
FT                   ICLCGGGLGVLFTIPLRRAMVVESKLAYPEGRAAAEILKVANKDQSNKKGKQGIKEIAL
FT                   GSFIAAIFSLLSNGFKLTASESNFAFIWNKMAFGFSMGYSLALLGAGYLVGLAGAIALF
FT                   VGMFLAWGIFTPYLSNFEFDSAKNAVDLASSVWSSKVRLIGTGAIAIAALWTLIELLKP
FT                   VIEGIKEIVKNVKITNQEKNERTNIDLSLKSIFILFVLMVVGLFITFYSFVEDANLSIY
FT                   YQMLFSFVGTLVSVLIGFFVAAACGYMAGLVGSSSSPISGIGLIGVIISSIVFLVLGVE
FT                   LFQDPMLSKFAVALAIFTTSVILATAAISNDNLQDLKTGHLVGATPWKQQVALLLGCVF
FT                   GALAIVPVLNLLYQAYGFVGAMPREGMDASSALAAPQANLMSTIAQGIFHHNIEWGYMA
FT                   FGVFVGILMIIIDKILRRTQKMSLPPLAVGIGIYLPPAVNIPLVIGGILKYIVMQYLTK
FT                   KYAKNSHKEEKLASCEQRGTLFASGLIVGESIFGVIIAGITVFSVSMGGSENPLALNLT
FT                   NFHDSELFALIFFVGVVLYFIKRIVKKDA"
FT   gene            232593..233396
FT                   /locus_tag="C1336_000040055"
FT                   /note="C1336_000040055 identified by Glimmer3 with a raw
FT                   score of 12.56."
FT   CDS             232593..233396
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040055"
FT                   /product="undecaprenyl-diphosphatase"
FT                   /note="C1336_000040055 identified by Glimmer3 with a raw
FT                   score of 12.56. Gene function extrapolated from C8J_0194
FT                   (CP000814.1) after blastn alignment (97.59 percent identity
FT                   over a 705 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31645.1"
FT                   /translation="MENLYALILGIIEGLTEFLPVSSTGHMILGATILGIDIDEFWKSF
FT                   LIIIQLGSILAVIFVFWRKLFQGLDIWLKLAVGFFPTGVIGLFVAKYLNALFNGWVVVG
FT                   MLIFGGVVLILIELAHKNKQYRINSLEEISFKQAFCIGIFQSLAMIPGTSRSGASIIGG
FT                   LLLGFNRKVAAEFSFLLAIPTMIIATAYSIYKEPELLSNANSLIPLSIGFITAFIVAVL
FT                   VIKFFLKFISKFDFIPFGIYRIILGFVFFYLYYSGILNAGSEFKL"
FT   gene            233527..235335
FT                   /locus_tag="C1336_000040056"
FT                   /note="C1336_000040056 identified by Glimmer3 with a raw
FT                   score of 14.24."
FT   CDS             233527..235335
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040056"
FT                   /product="threonyl-tRNA synthetase"
FT                   /note="C1336_000040056 identified by Glimmer3 with a raw
FT                   score of 14.24. Gene function extrapolated from Cj0206
FT                   (AL111168.1) after blastn alignment (99.32 percent identity
FT                   over a 1477 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31646.1"
FT                   /translation="MEKEVIAYLDNETIIDSQSVKDTNLKEIYFDNSKESLEVIRHSCA
FT                   HLMAQAIKSLYPEAKFFVGPVIEDGFYYDFRVESKIGEEDLVKIEKKMKELAEAKIEIS
FT                   KYEITKNEALAKFQNDDLKQEVLLRIPDGAVSIYKQGEFEDLCRGPHVPNTKFLRFFKL
FT                   TRVAGAYLGGDEKREMLTRIYGTAFADKESLKEYLTIIEEAKKRDHRKLGTELKLFTFD
FT                   DEIGGGLPIWLSNGARLRSKLEHMLYKIHRLRGYEPVRGPELLKADAWKISGHYANYKE
FT                   NMYFTQIDEQEYGIKPMNCVGHIKIYQSDVRSYRDLPLKFFEYGVVHRHEKSGVLHGLF
FT                   RVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKAIGDDEIW
FT                   EIATKALKEALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRF
FT                   KLEYTDSDNEKKQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHI
FT                   AYAKEIQKELLELNIDSEVYEKNESLSKKIRIAEKQKLPMILVLGDDEVAKRSVALRDR
FT                   RAKEQKNLSLDEFIKLVKEKMSEVHF"
FT   gene            235332..235850
FT                   /locus_tag="C1336_000040057"
FT                   /note="C1336_000040057 identified by Glimmer3 with a raw
FT                   score of 15.57."
FT   CDS             235332..235850
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040057"
FT                   /product="translation initiation factor IF-3"
FT                   /note="C1336_000040057 identified by Glimmer3 with a raw
FT                   score of 15.57. Gene function extrapolated from
FT                   CJJ81176_0239 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 216 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31647.1"
FT                   /translation="MSKEKEVLLNEEIRADEIRCVGDDGKVYGIISSDEALEIANRLGL
FT                   DLVMIAADAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIDIKEIKLSVKIAQNDINYK
FT                   VKHALEFLEQGKHVRFRVFLKGREMATPEAGVVLLEKIWTMIENEANRDKEPNFEGRYV
FT                   NMLVTPKKA"
FT   gene            235889..236980
FT                   /locus_tag="C1336_000040058"
FT                   /note="C1336_000040058 identified by Glimmer3 with a raw
FT                   score of 14.15."
FT   CDS             235889..236980
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040058"
FT                   /product="DNA modification methylase (adenine-specific
FT                   methyltransferase)"
FT                   /note="C1336_000040058 identified by Glimmer3 with a raw
FT                   score of 14.15. Gene function extrapolated from C8J_0197
FT                   (CP000814.1) after blastn alignment (98.46 percent identity
FT                   over a 130 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31648.1"
FT                   /translation="MKENPSFLKEQIITYLGNKRALLSFLNKGFKVAKKELGKDKFSFC
FT                   DMFSGSGIVSRFAKAYSSYILANDLEDYSKLINECYLANKDKDLLQNLKKCYKNLTQNL
FT                   DFQKGFISELYAPKDDDDIKKNERVFYTFKNALYLDTMRQRIENEIPKELKHFFIAPLI
FT                   YEASVHSNTSGVFKGFYKGKDGIGKFGGEGQNALKRIKGEIELKMPIFSNFSCEFEVMQ
FT                   KDASMLAKELDFFDVVYLDPPYNQHPYSSNYFMLNLIANYKKPEEISKISGIPKDWNRS
FT                   TFNKSKFAQDALFELINDLKARVILLSYNCEGFIKKEIFLKRLSTLGKCRILEQKYNTF
FT                   RASRNLKNRNIHLHEQLYILVKN"
FT   gene            237144..238172
FT                   /locus_tag="C1336_000040059"
FT                   /note="C1336_000040059 identified by Glimmer3 with a raw
FT                   score of 15.01."
FT   CDS             237144..238172
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040059"
FT                   /product="N-acetyl-gamma-glutamyl-phosphate reductase"
FT                   /note="C1336_000040059 identified by Glimmer3 with a raw
FT                   score of 15.01. Gene function extrapolated from C8J_0202
FT                   (CP000814.1) after blastn alignment (97.67 percent identity
FT                   over a 1029 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31649.1"
FT                   /translation="MKIKVGILGASGYAGNELVRILLNHPKVEISYLGSSSSVGQNYQD
FT                   LYPNTPLNLCFENKNLDELELDLLFLATPHEFSAKLLNENLLKKMKIIDLSADFRLKNP
FT                   KDYELWYKFTHPNQELLQNAVYGLCELYKEEIKKASLVANPGCYTTCSILSLYPLFKEK
FT                   IIDFNSVIIDAKSGVSGAGRSAKMENLFCEVNENIKAYGLASHRHTPEIEEHLSYAAKE
FT                   KITLQFTPHLVPMQRGILISAYANLKENLQEQDIRDIYTKYYQNNKFIRLLPPQSFPQT
FT                   RWVKSSNFADINFSIDQRTRRVIVLGAIDNLIKGAAGQAVQNMNLMFDFDEDEGLKFFA
FT                   NL"
FT   gene            238182..238628
FT                   /locus_tag="C1336_000040060"
FT                   /note="C1336_000040060 identified by Glimmer3 with a raw
FT                   score of 12.12."
FT   CDS             238182..238628
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040060"
FT                   /product="acetyltransferase, GNAT family"
FT                   /note="C1336_000040060 identified by Glimmer3 with a raw
FT                   score of 12.12. Gene function extrapolated from C8J_0203
FT                   (CP000814.1) after blastn alignment (97.74 percent identity
FT                   over a 443 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31650.1"
FT                   /translation="MIIRAMQKSDYEVVYKLWCEIKGFGIRSIDDSKENIENFLDRNPN
FT                   LSVVAVIDEEIVGSILCGHDGRTGGFYHVCVHKDHRKKGIAHEMTKFCLEALKAQKINK
FT                   IALIAFKNNDLGNEFWKHYGFTLREDANYYDLSLNEYNQTSFNV"
FT   gene            238638..239477
FT                   /locus_tag="C1336_000040061"
FT                   /note="C1336_000040061 identified by Glimmer3 with a raw
FT                   score of 16.55."
FT   CDS             238638..239477
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040061"
FT                   /product="acetylglutamate kinase"
FT                   /note="C1336_000040061 identified by Glimmer3 with a raw
FT                   score of 16.55. Gene function extrapolated from
FT                   JJD26997_0224 (CP000768.1) after blastn alignment (97.50
FT                   percent identity over a 840 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31651.1"
FT                   /translation="MQKYLEKANVLIEALPYIRKFNSKIILIKYGGSAMEDEELKHCVM
FT                   QDIALLKLVGLKPIIVHGGGKDISAMCEKLGVKSEFKNGLRVSDKATTEVASMVLNHIN
FT                   KNLVHSLQNLGVKAIGLCGKDGALLECVKKDVNLAFVGTIQKVNSKILEELLEKDFLPI
FT                   IAPIGMDEDFNTYNINADDAACAIAKALRAEKLAFLTDTAGLYEDFNDKNSLISKISLE
FT                   QAKILAPKIEGGMHVKLKSCIDACENGVKKVHILDGRVKHSLLLEFFTDEGIGTLVG"
FT   gene            239487..240668
FT                   /locus_tag="C1336_000040062"
FT                   /note="C1336_000040062 identified by Glimmer3 with a raw
FT                   score of 15.87."
FT   CDS             239487..240668
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040062"
FT                   /product="acetylornithine aminotransferase"
FT                   /note="C1336_000040062 identified by Glimmer3 with a raw
FT                   score of 15.87. Gene function extrapolated from CJE0278
FT                   (CP000025.1) after blastn alignment (98.39 percent identity
FT                   over a 868 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31652.1"
FT                   /translation="MDYKEQSHIIPTYKRFDIVLEKGQGVYLFDDKAKKYLDFSSGIGV
FT                   CALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESI
FT                   EGAMKTARKYAFNKGIKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAK
FT                   YNDILSVEKLVNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCG
FT                   MGRSGKFFAYEHAQILPDIMTSAKALGCGLSVGAFVINQKVASNSLEAGDHGSTYGGNP
FT                   LVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELIKEFDFCKKRKGLGFMQGLSLDK
FT                   SVKVSKVIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKALKSF"
FT   gene            complement(240688..241317)
FT                   /locus_tag="C1336_000040063"
FT                   /note="C1336_000040063 identified by Glimmer3 with a raw
FT                   score of 16.93."
FT   CDS             complement(240688..241317)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040063"
FT                   /product="protein-L-isoaspartate O-methyltransferase"
FT                   /note="C1336_000040063 identified by Glimmer3 with a raw
FT                   score of 16.93. Gene function extrapolated from
FT                   CJJ81176_0253 (CP000538.1) after blastn alignment (98.10
FT                   percent identity over a 630 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31653.1"
FT                   /translation="MNAFEQKRCQNMAEEIAQKVFINEELFNAFCQIPREIFSPLKAHA
FT                   YRLDALPLANSQWISSPLTVAKMTMALDFKNADSILEIGCGSGYQAAILSKVIRRVFTI
FT                   ERIENLAKKAAQTFRELELFNINVKFDDGQNGWKNYAPYDRILFSAYATQIPEILLDQL
FT                   SDGGILVAPILHNGKQFITRLRKNGTNLQKEILEECLFVPIVDGKE"
FT   gene            241406..241954
FT                   /locus_tag="C1336_000040064"
FT                   /note="C1336_000040064 identified by Glimmer3 with a raw
FT                   score of 12.64."
FT   CDS             241406..241954
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040064"
FT                   /product="transferase, hexapeptide repeat family"
FT                   /note="C1336_000040064 identified by Glimmer3 with a raw
FT                   score of 12.64. Gene function extrapolated from
FT                   CJJ81176_0254 (CP000538.1) after blastn alignment (98.54
FT                   percent identity over a 549 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31654.1"
FT                   /translation="MLIKFKNHSPKLGQNVFVAEGAKIIGEIEIGDESSIWFNCVLRAD
FT                   VNFIKIGKRTNIQDLSTVHVWHREFDEKGKLKDAGFPTIIGDDVTIGHNCVIHACVIKN
FT                   RVLIGMNAVVMDNALIEEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRELNDEEISFL
FT                   KQSALNYVDFKNEFLKDLQ"
FT   gene            complement(241923..243293)
FT                   /locus_tag="C1336_000040065"
FT                   /note="C1336_000040065 identified by Glimmer3 with a raw
FT                   score of 14.57."
FT   CDS             complement(241923..243293)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040065"
FT                   /product="putative transferase protein"
FT                   /note="C1336_000040065 identified by Glimmer3 with a raw
FT                   score of 14.57. Gene function extrapolated from Cj0230c
FT                   (AL111168.1) after blastn alignment (99.32 percent identity
FT                   over a 296 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31655.1"
FT                   /translation="MTSKTSLALLCDFYEFTMSQGYFKNNKKDQICYFDIFFRKIPDSG
FT                   SFAIFAGLEDILDFVENLSFDAEDIEFLRKQGIFDTEFLDFLANFKFKGEIYAMREGEV
FT                   IFPNEPLLCIKATTIEAQLLETFLLLSLNHQSLIATKTNRIVRAAKNSKILEFGSRRAQ
FT                   GSEAALKGARAAFIGGCIGSACTLAGKIYNIPINGTMAHSWVQMFENELEAFKAYVKIY
FT                   PKNPVFLIDTYDCLNSGLKNAIKVFKEFGIQEGGVRIDSGNLFELSLKIRQELDQAGLQ
FT                   KCKIIVSNALDEWSIKKLKEQNAPIDIFGVGERLITASSDPIFSCVYKLAALEDQGIKP
FT                   KIKISENNEKSTLPHFKKLFRVYDKNTQKILFDELYVFDENPNQDENLERKELLELVYK
FT                   EKRLLKKSSLNTIQDYTKEQISKLDESFLDLDRFVKFEVKLSPKLQNITEDLLKTRF"
FT   gene            complement(243283..244305)
FT                   /locus_tag="C1336_000040066"
FT                   /note="C1336_000040066 identified by Glimmer3 with a raw
FT                   score of 12.69."
FT   CDS             complement(243283..244305)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040066"
FT                   /product="ribonucleoside-diphosphate reductase, beta
FT                   subunit"
FT                   /note="C1336_000040066 identified by Glimmer3 with a raw
FT                   score of 12.69. Gene function extrapolated from
FT                   CJJ81176_0256 (CP000538.1) after blastn alignment (98.53
FT                   percent identity over a 1023 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31656.1"
FT                   /translation="MQRKRIYNPSSNETLGDRKVFDGNPHGILNFTKAKYTWALKLWDL
FT                   MEANTWFPKEVDTTKDALDYRCNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPYIT
FT                   APEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSIYEE
FT                   LAGDVDDNKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDEITHL
FT                   LLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKWGKYITQNQIMGFTDDIIEE
FT                   YIHYLVDQRLSAINLDKLYNAKHPIKWVDDFSKFNDQKSNFFESKVTNYSKGSISFDDF
FT                   "
FT   gene            complement(244319..244729)
FT                   /locus_tag="C1336_000040067"
FT                   /note="C1336_000040067 identified by Glimmer3 with a raw
FT                   score of 7.65."
FT   CDS             complement(244319..244729)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040067"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000040067 identified by Glimmer3 with a raw
FT                   score of 7.65. Gene function extrapolated from Cj0232c
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 268 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31657.1"
FT                   /translation="MKTKAKISSRWLRFRALLIDIFLIYVPILYLFYFLLGSKEAFLNN
FT                   HFITTLCTFLFGLIQAIFLTKKAQSPGLKAYDLYLIDIKTGKKLSFLRILLRYVIFIIS
FT                   FGLLFGLFVSFVRKDRLNLHDILTQSCIATKA"
FT   gene            complement(244730..245338)
FT                   /locus_tag="C1336_000040068"
FT                   /note="C1336_000040068 identified by Glimmer3 with a raw
FT                   score of 17.41."
FT   CDS             complement(244730..245338)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040068"
FT                   /product="putative orotate phosphoribosyltransferase"
FT                   /note="C1336_000040068 identified by Glimmer3 with a raw
FT                   score of 17.41. Gene function extrapolated from C8J_0211
FT                   (CP000814.1) after blastn alignment (98.36 percent identity
FT                   over a 609 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31658.1"
FT                   /translation="MNLEQIYKDCGAYLEGHFLLSSGKHSQFYLQSAKVLEDPKLAAKL
FT                   CDELAKIIASYKIEFDSICSPALGGILAGYELARACSKRFIFTERVNKEMTLRRGFEVK
FT                   KGEKFIICEDIITTGGSALESAKIIESLGGIVVGFAALANRGFCAVENLKSPRKDNAKL
FT                   PENLPLFTLGNFEFEIYDETNCPFCKKGSKAIKPGSRGN"
FT   gene            complement(245341..245898)
FT                   /locus_tag="C1336_000040069"
FT                   /note="C1336_000040069 identified by Glimmer3 with a raw
FT                   score of 17.68."
FT   CDS             complement(245341..245898)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040069"
FT                   /product="ribosome recycling factor"
FT                   /note="C1336_000040069 identified by Glimmer3 with a raw
FT                   score of 17.68. Gene function extrapolated from C8J_0212
FT                   (CP000814.1) after blastn alignment (98.03 percent identity
FT                   over a 558 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31659.1"
FT                   /translation="MLSEIFNKQKTQSEKSLEALKKDFTTLRTGKVNTHILDHITVDYY
FT                   GTQAPLNQVATVLASDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPP
FT                   MTREQREENVKQAKAMGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKL
FT                   TNAYTIKIDESVKSKESELLKV"
FT   gene            complement(245914..246282)
FT                   /locus_tag="C1336_000040070"
FT                   /note="C1336_000040070 identified by Glimmer3 with a raw
FT                   score of 13.23."
FT   CDS             complement(245914..246282)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040070"
FT                   /product="putative protein-export membrane protein"
FT                   /note="C1336_000040070 identified by Glimmer3 with a raw
FT                   score of 13.23. Gene function extrapolated from Cj0235c
FT                   (AL111168.1) after blastn alignment (97.04 percent identity
FT                   over a 372 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31660.1"
FT                   /translation="MITLLIILQFIIVVVICIAVLLQKSSSIGLGAYSGSNESLFGAKG
FT                   PAGFLAKFTFIMGILLIANTIGLGYLYNKASKDSLAEKIKVENNTTIPSAPIAPATPNT
FT                   NSIAPSAPQLPSDVNLSK"
FT   gene            complement(246386..247081)
FT                   /locus_tag="C1336_000040071"
FT                   /note="C1336_000040071 identified by Glimmer3 with a raw
FT                   score of 10.64."
FT   CDS             complement(246386..247081)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040071"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000040071 identified by Glimmer3 with a raw
FT                   score of 10.64. Gene function extrapolated from C8J_0214
FT                   (CP000814.1) after blastn alignment (99.57 percent identity
FT                   over a 696 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31661.1"
FT                   /translation="MSLYDRDYSRSKEFENTRSSELSIFIKQTYQLFAASLLAATVGAY
FT                   VGIFALASFFIQSQVTFWILFAVEIGLLFALQWKKREAPLNLVLLFGFTFCSGLTLTPL
FT                   LISVLALPAGGIIIAQAFALTTVAFAGLSVFAMNTKKDFTVMGKALFIVLIVIVAASLL
FT                   NLFFQSSIVNLAISAVAAILFSFYILYDTQNIIRGNYETPIEGAVALYLDFVNLFVSLL
FT                   NILRSFNSR"
FT   gene            247242..247877
FT                   /locus_tag="C1336_000040072"
FT                   /note="C1336_000040072 identified by Glimmer3 with a raw
FT                   score of 10.64."
FT   CDS             247242..247877
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040072"
FT                   /product="carbonic anyhydrase"
FT                   /note="C1336_000040072 identified by Glimmer3 with a raw
FT                   score of 10.64. Gene function extrapolated from C8J_0215
FT                   (CP000814.1) after blastn alignment (99.84 percent identity
FT                   over a 636 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31662.1"
FT                   /translation="MENLISGAIKFMQEDFKEHEELFESLKNKQNPHTLFIGCSDSRVI
FT                   PNLITNTGPGELFVIRNIANIVPPYRVGEDYLATTSAIEYALNSLHIKNIVVCGHSNCG
FT                   GCNALYYSDEELNKIPNVKKWLTMLDPIKKDVMIFARDDLAMRSWLTEKLNLVNSLQNI
FT                   LTYPGVQEALDEGKIEVHAWYYIIETGEIYEYDFKAKIFTLIQDRKVQ"
FT   gene            247874..249757
FT                   /locus_tag="C1336_000040073"
FT                   /note="C1336_000040073 identified by Glimmer3 with a raw
FT                   score of 10.60."
FT   CDS             247874..249757
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040073"
FT                   /product="putative mechanosensitive ion channel family
FT                   protein"
FT                   /note="C1336_000040073 identified by Glimmer3 with a raw
FT                   score of 10.60. Gene function extrapolated from Cj0238
FT                   (AL111168.1) after blastn alignment (98.19 percent identity
FT                   over a 718 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31663.1"
FT                   /translation="MKKIIFSLCFFILYLGAQEFKFIDANISKEDEGIYALVEKYVDLN
FT                   NQIKEFKKNNDENSSTFNGILSEFEKDKKTILAKIPDMIVGQKINEEAVARFLKAKEKL
FT                   LDVQKKNINKPYIYTDATLNLVYFNIVESFYSSLFEVEKLFKNTASSEDLIATVDKAME
FT                   NLQNSSSVNLDSFKSKITNPEELEKITLKERYIGNALDSYSEILKYLRSNADLLESNYI
FT                   FSLLELQVWIDRINEAIGVSFVNIGKIVISALVLVFFISLRRFFANIVYFFLVRLFYRN
FT                   KNDVDDIKVIFIENIKKPVSFFLIVYAISICLTIATYPAPLSINLSNFFHIIYAVLIAW
FT                   LILKMLDGYGMVLVSKLAQKSGKKEVVNLIIKILYFVIIIIALLYILAQLGFNISAIIA
FT                   SLGIGGLAVALAAKDIIANFFASILLLFDNSFNQGDWVEVSGIEGTVVEIGLRKTTIRT
FT                   FDNCLVFLPNSTIMGANIKNWSKRRMGRHVRMYLGVGYDATPEKLDQCVKDLKEFLDTS
FT                   DLVAHDEDSALKYGDHTTKYRQNLVSINDLEGYKNACYVALSEFADSSINIELYFYTKK
FT                   IGAKDFREARQSLMLEFMRIIEKNGLTFAFPSRSIYIENLPPLDLQAKAIK"
FT   gene            complement(249780..250751)
FT                   /locus_tag="C1336_000040074"
FT                   /note="C1336_000040074 identified by Glimmer3 with a raw
FT                   score of 15.97."
FT   CDS             complement(249780..250751)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040074"
FT                   /product="nifU-like protein"
FT                   /note="C1336_000040074 identified by Glimmer3 with a raw
FT                   score of 15.97. Gene function extrapolated from C8J_0217
FT                   (CP000814.1) after blastn alignment (97.74 percent identity
FT                   over a 972 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31664.1"
FT                   /translation="MGKNSLIGGSIWDEYSQKVQDRMNNPQHMGEFSEEDAKARNAKLI
FT                   VADFGAESCGDAVRLFWLVDEKTDKIIDAKFKSFGCGTAIASSDTMVDLCIGKTVDEAV
FT                   KITNLDVEFAMRDNPETPAVPPQKMHCSVMAYDVIKQAAAHYKGISPEDFEDQIIVCEC
FT                   ARVSLGTIKEVIKLNDLHSVEEITQYTKAGAFCKSCIKPGGHEKRDYYLVDILAETRAE
FT                   MDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAA
FT                   IDVYIRYLGACSGCSSGSGATLYAIETILQEELSPNIRVMPV"
FT   gene            complement(250761..251942)
FT                   /locus_tag="C1336_000040075"
FT                   /note="C1336_000040075 identified by Glimmer3 with a raw
FT                   score of 14.64."
FT   CDS             complement(250761..251942)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040075"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040075 identified by Glimmer3 with a raw
FT                   score of 14.64. Gene function extrapolated from Cj0240c
FT                   (AL111168.1) after blastn alignment (98.98 percent identity
FT                   over a 1182 bp alignment) - for clarity, the original
FT                   suspect product name 'cysteine desulfurase (NifS protein
FT                   homolog)' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31665.1"
FT                   /translation="MKVYLDNNATTMLDPNAYELMLPFLKDMYGNPNSLHQYGSATHPA
FT                   LREALDKLYAGLGANDLDDIVVTSCATESINWVLKGVYFDHILDKERNEVIISSVEHPA
FT                   VTAAAYFLKSLGVKVIELPVNEEGVSTVENLRKVISDKTALVSVMWANNETGMIFDIKA
FT                   MAELAHEFGALFHTDATQAVGKIKVNLTQVGVDFASFSAHKFHGPKGVGGLFIKKGLKL
FT                   TPLLHGGEHMGGRRSGTLNVPYIVAMGEALRIANTMLDFEDSHIRRLRDKLEDQILALP
FT                   DTTVVGKREHRVPNTILASIKGVEGEAMLWDLNKNGIAASTGSACASEALESNPIMEAI
FT                   GAEHDLAHTALRLSLSRFNTEEEIDYAAKQIKNATQRLRAISCTYAYNPNNYK"
FT   gene            complement(252131..252532)
FT                   /locus_tag="C1336_000040076"
FT                   /note="C1336_000040076 identified by Glimmer3 with a raw
FT                   score of 8.09."
FT   CDS             complement(252131..252532)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040076"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040076 identified by Glimmer3 with a raw
FT                   score of 8.09. Gene function extrapolated from
FT                   CJJ81176_0266 (CP000538.1) after blastn alignment (98.76
FT                   percent identity over a 402 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31666.1"
FT                   /translation="MIYNEKIISMNNDLLDHQHKELFEISKKLSLMSQRHVETKELKIV
FT                   LRELLIMINRHFSDEEAFMREIEYPYINHHTRIHRKIILEIEEIIISEAKFVNIMTEKL
FT                   NLVVQDFIFKHTAKEDSKIVKYYEEKFKK"
FT   gene            complement(252671..253837)
FT                   /locus_tag="C1336_000040077"
FT                   /note="C1336_000040077 identified by Glimmer3 with a raw
FT                   score of 10.10."
FT   CDS             complement(252671..253837)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040077"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040077 identified by Glimmer3 with a raw
FT                   score of 10.10. Gene function extrapolated from
FT                   JJD26997_0240 (CP000768.1) after blastn alignment (96.83
FT                   percent identity over a 757 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31667.1"
FT                   /translation="MTINSANPYQNLTLSNPLQNSSALNLIKDSKALEQEGNENSLEQL
FT                   SYIFNNTTYASEFGFRINEEGFFNKDLNKIANIPESYDINIKSVRSIAKELTKQDEILN
FT                   YNKIDLPYLLNSYYSSLKSINSEFLQDDNAYLSRDFISKLSSGFSTDNGEFLGQISRIY
FT                   NNQEEIDLALSNITNLNTLMLDNKITNFHFNKAIENTSSNEILKPYLTKNAEVSKSGLL
FT                   MNFIYHDIKTQNEKEFNFFMKPVTLELSSHQNLQKILKGEMDIEDYIKKENEKKMSFDL
FT                   YLYVNGIDKKTSTQDKLSVFFQQYINYQKDMDLREFANSSSIFQIYINQTRNDFDAFKK
FT                   QYQNQSQDTQRLEEVNQLRSNSIENFLDRRQKQANINKILNSYMSVMV"
FT   gene            253994..254185
FT                   /locus_tag="C1336_000040078"
FT                   /note="C1336_000040078 identified by Glimmer3 with a raw
FT                   score of 12.43."
FT   CDS             253994..254185
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040078"
FT                   /product="ribosomal protein L35"
FT                   /note="C1336_000040078 identified by Glimmer3 with a raw
FT                   score of 12.43. Gene function extrapolated from C8J_0221
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 192 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31668.1"
FT                   /translation="MPKMKSVKSAVKRFKVGKNKIKRGSAFRSHILTKKPAKRMRDLRT
FT                   AKYVHSTNVKAVEKMLGI"
FT   gene            254279..254632
FT                   /locus_tag="C1336_000040079"
FT                   /note="C1336_000040079 identified by Glimmer3 with a raw
FT                   score of 15.03."
FT   CDS             254279..254632
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040079"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040079 identified by Glimmer3 with a raw
FT                   score of 15.03. Gene function extrapolated from C8J_0222
FT                   (CP000814.1) after blastn alignment (99.70 percent identity
FT                   over a 335 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31669.1"
FT                   /translation="MARVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSLVY
FT                   AYRDRRRKKRDFRRLWIVRINAACRLNDLSYSRFINGLKKAGIELDRKILADLAMNDSA
FT                   AFAKIAEAVKKAL"
FT   gene            complement(254686..255498)
FT                   /locus_tag="C1336_000040080"
FT                   /note="C1336_000040080 identified by Glimmer3 with a raw
FT                   score of 9.53."
FT   CDS             complement(254686..255498)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040080"
FT                   /product="putative MCP-domain signal transduction protein"
FT                   /note="C1336_000040080 identified by Glimmer3 with a raw
FT                   score of 9.53. Gene function extrapolated from
FT                   CJJ81176_0272 (CP000538.1) after blastn alignment (99.39
FT                   percent identity over a 164 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31670.1"
FT                   /translation="MGIAKSLVAIFFYEVENFNDFKPRYLKTFIQKYSDFKYYYLNIRA
FT                   QKLEMTNEINKIILNQLKQNTSEIDKNTSIFKEIFEELENIRRSLITISESFTNFTNYL
FT                   EYNLYQSEEKMNLEKEVQSSLKNIDQLNSILDLISGIAEQTSLLSLNASIEAARAGKLG
FT                   RGFAVVADEVRKLSENTQMGLGEMEGAIKLVIQTIQSIAKSSNSSTQEMNFIRDKSNEF
FT                   SKIISNLINSGKEISDKLKQRSNVGKDFEKNVNQLKCYEDVLAKLNQY"
FT   gene            complement(255615..256661)
FT                   /locus_tag="C1336_000040081"
FT                   /note="C1336_000040081 identified by Glimmer3 with a raw
FT                   score of 8.72."
FT   CDS             complement(255615..256661)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040081"
FT                   /product="putative MCP-domain signal transduction protein"
FT                   /note="C1336_000040081 identified by Glimmer3 with a raw
FT                   score of 8.72. Gene function extrapolated from Cj0246c
FT                   (AL111168.1) after blastn alignment (98.41 percent identity
FT                   over a 126 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31671.1"
FT                   /translation="MFFNFKNKSSTKKEESKKVLEALYLQENELEEKLKKINIKPKLII
FT                   GFASYQLNLAIIGNKIQNSINEQCDIILSSATDLLCNLDSNSNIENSPYKQNIQGISLM
FT                   LFSEDMIENLCTNKIKLFSNIKDHTERKKLIEKEVLSINIPFEAHCTNTLHYLIYDGLS
FT                   QSESSLLELLYKHNPYPCALVGGGSSGNMDFSGTFIFYNGEILKNQALSIHVQFKSKYR
FT                   FDLMKSQNFNPQSNITFTILDASLYDRTIREFIDKKTFQSINAVEALCNYFNCTFEELK
FT                   NKMQEYTFALKIGEDYLISPMEINPDKTLFSYCDIESAQELSLLKKTNFIEAIKKITKN
FT                   FLLINQNH"
FT   gene            256846..257640
FT                   /locus_tag="C1336_000040082"
FT                   /note="C1336_000040082 identified by Glimmer3 with a raw
FT                   score of 11.24."
FT   CDS             256846..257640
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040082"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040082 identified by Glimmer3 with a raw
FT                   score of 11.24. Gene function extrapolated from C8J_0225
FT                   (CP000814.1) after blastn alignment (94.21 percent identity
FT                   over a 795 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31672.1"
FT                   /translation="MIGDMNELLLKSVEVLPPLPDTVSKLRKYVSEANSNIETMKVAEI
FT                   ISSDPLMTAKLLQLANSPYYGFTREITTINQVITLLGVGNIINIVTADSIKDSFKIDVS
FT                   PYGLDTQVFLRNCNEEATFITNWLNDEDKKLSHLLVPCAMLLRLGIVIFSNFLIQNHRE
FT                   KEFLTFLNETKIENIALAENEFLGVDHISFLGFLLHRWNFDDVLIESICFVRTPHAARE
FT                   EVKKSAYALAITDHLFAPHDGSSPFNAKAAVALLEEAKNSRN"
FT   gene            257741..258217
FT                   /locus_tag="C1336_000040083"
FT                   /note="C1336_000040083 identified by Glimmer3 with a raw
FT                   score of 9.54."
FT   CDS             257741..258217
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040083"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040083 identified by Glimmer3 with a raw
FT                   score of 9.54. Gene function extrapolated from
FT                   CJJ81176_0276 (CP000538.1) after blastn alignment (98.32
FT                   percent identity over a 477 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31673.1"
FT                   /translation="MKSLILPPNEFLDHYILNAEFHRFAGISKNAYKFWKNVEIGRYQG
FT                   TRIIFLHRNCILEKHQQALRQCSDLNGFVLASAFCSFTGLAPSHLVEKNNSSIYKLLEL
FT                   KEICGIKFVNLKKFYDFLGLNYHQHIYIEKCHFFSPAPFEKRIKITESMCVGYY"
FT   gene            complement(258279..258434)
FT                   /locus_tag="C1336_000040084"
FT                   /note="C1336_000040084 identified by Glimmer3 with a raw
FT                   score of 17.31."
FT   CDS             complement(258279..258434)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040084"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040084 identified by Glimmer3 with a raw
FT                   score of 17.31. Gene function extrapolated from C8J_0228
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 93 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31674.1"
FT                   /translation="MAYEDEEDLNYDDYENEDEEYPQNHHKNYNYDDDDYEYDDDNNDD
FT                   DFYEMD"
FT   gene            258527..259000
FT                   /locus_tag="C1336_000040085"
FT                   /note="C1336_000040085 identified by Glimmer3 with a raw
FT                   score of 12.63."
FT   CDS             258527..259000
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040085"
FT                   /product="molybdenum cofactor biosynthesis protein MoaC"
FT                   /note="C1336_000040085 identified by Glimmer3 with a raw
FT                   score of 12.63. Gene function extrapolated from C8J_0229
FT                   (CP000814.1) after blastn alignment (98.10 percent identity
FT                   over a 474 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31675.1"
FT                   /translation="MKLSHLDEKNHPKMVDVSDKNITSRIATASGMIYMSQEAFDVIKN
FT                   NTAKKGPVLQTAIVAAIMGAKKTSEIIPMCHPLMLSKVETDIVEFVKECAFKLIVTVKC
FT                   EGKTGVEMEALSGVSIGLLTIYDMIKAVDKSMRIMDIVLESKEGGKSGKFVRS"
FT   gene            258978..259241
FT                   /locus_tag="C1336_000040086"
FT                   /note="C1336_000040086 identified by Glimmer3 with a raw
FT                   score of 11.07."
FT   CDS             258978..259241
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040086"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040086 identified by Glimmer3 with a raw
FT                   score of 11.07. Gene function extrapolated from C8J_0230
FT                   (CP000814.1) after blastn alignment (97.35 percent identity
FT                   over a 264 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31676.1"
FT                   /translation="MVNLCDLKKEPQINYPTFWDYKVIFEVHVKPSEIFQEILGQREYK
FT                   FEHSNSSASGKYTSYLLNVYVDSKKDRLDIFDKLKAKAKFVL"
FT   gene            259255..260391
FT                   /locus_tag="C1336_000040087"
FT                   /note="C1336_000040087 identified by Glimmer3 with a raw
FT                   score of 13.80."
FT   CDS             259255..260391
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040087"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040087 identified by Glimmer3 with a raw
FT                   score of 13.80. Gene function extrapolated from CJE0304
FT                   (CP000025.1) after blastn alignment (97.66 percent identity
FT                   over a 128 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31677.1"
FT                   /translation="MKNTLIIFENSLSNLGKYEASDLLEDLSFNLAYKQISHNPHETKK
FT                   ILNSLLVEFLTILKKLDFCDDENVSKVIKALVKASVADAQNSLYEYISEAELLNKQIEN
FT                   QKNLIKNQISDNFFEFESILQECSFCNEFSGGLNDAILFDIEMLGILKETAESAFLTTL
FT                   EKAEDIELTSSEIAKNLVYNAICEAHFEKERILKISSIILNTAFEIANESMAYAKDLCL
FT                   GVIKGTRDGIVLAMEKFKASLTYANFEEDVSLKSKELIGIEDDFIALLKKEIQLQNDPC
FT                   RSIVENLLEHELDNLFAKFRRLASESREQLILVLNDIKRNPKINDFNKLTQRKLNHFKQ
FT                   EIFELEKIASEKYKDLNSKKAKKLGVRLWEKAKKFVKK"
FT   gene            complement(260410..261168)
FT                   /locus_tag="C1336_000040088"
FT                   /note="C1336_000040088 identified by Glimmer3 with a raw
FT                   score of 14.21."
FT   CDS             complement(260410..261168)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040088"
FT                   /product="exodeoxyribonuclease III"
FT                   /note="C1336_000040088 identified by Glimmer3 with a raw
FT                   score of 14.21. Gene function extrapolated from
FT                   CJJ81176_0282 (CP000538.1) after blastn alignment (97.50
FT                   percent identity over a 759 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31678.1"
FT                   /translation="MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPK
FT                   KIYEYPFKHMYFNSAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNI
FT                   YFPNGQKDEERLNFKMKFYADFLAYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANVN
FT                   TSGFLPIERAWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFIS
FT                   KGLKDKLKNAFIRDDIFGSDHAPVGIEIDI"
FT   gene            261286..262824
FT                   /locus_tag="C1336_000040089"
FT                   /note="C1336_000040089 identified by Glimmer3 with a raw
FT                   score of 9.52."
FT   CDS             261286..262824
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040089"
FT                   /product="sulfatase, putative"
FT                   /note="C1336_000040089 identified by Glimmer3 with a raw
FT                   score of 9.52. Gene function extrapolated from
FT                   CJJ81176_0283 (CP000538.1) after blastn alignment (96.45
FT                   percent identity over a 1155 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31679.1"
FT                   /translation="MLRLTWFQFTFFNSLMIVLLNFNLFYFVYEKNTQNWFITFVFIIA
FT                   YFALVHVVCSLLFIKFFTKFFSILFIIASFLSVYFISFYGVLIDSDMIQNVVQTDIKEV
FT                   KDLLNLKLILFVVLALLLVFYVVKVKIDYYGSFKSHIKIKIINIISGLIVVCAILIPLS
FT                   KTFLPFFRNYNEIRMYNTPFYQFYAVYRYYVRFVKAKPEFKTIANDAYRENNHTKKLLV
FT                   LVVGETARAANYSLGGYTKNDTNFYTKKDNVVFFDNFSSCGTATAVSLPCMFSISKRRD
FT                   YSSSEFQENAMDILYKTGVDAAWFDNNSGGCKGVCDRLAYKQKLSSDLDENLLTPFKEK
FT                   LNHLSDQNIIVLHLQGSHGPTYYKRYPNEFKKFTPTCDTNELSKCDSKALINTYDNTLL
FT                   YTDYLLSEIIKLLKEQKDYESSLFYLSDHGESLGENDIYLHGMPYAIAPSYQTHIPAIF
FT                   WSNDEKLMNLAKEHKGLKLSQDNLFSTLLGYFDVKTSVYEPEYDLLNPKLKANP"
FT   gene            262821..263177
FT                   /locus_tag="C1336_000040090"
FT                   /note="C1336_000040090 identified by Glimmer3 with a raw
FT                   score of 12.40."
FT   CDS             262821..263177
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040090"
FT                   /product="diacylglycerol kinase"
FT                   /note="C1336_000040090 identified by Glimmer3 with a raw
FT                   score of 12.40. Gene function extrapolated from
FT                   CJJ81176_0284 (CP000538.1) after blastn alignment (97.41
FT                   percent identity over a 116 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31680.1"
FT                   /translation="MKPKYHFLNNARYALEGIFTLFKNEMAFRIELCIIIPAIVFSFFL
FT                   KVSFLEHLLLVSVLMLILIIEALNSAIEACVDLVTNEWHEKAKIAKDCASAAVFFSVLL
FT                   ALFVWGFILYNIYL"
FT   gene            263174..263419
FT                   /locus_tag="C1336_000040091"
FT                   /note="C1336_000040091 identified by Glimmer3 with a raw
FT                   score of 11.20."
FT   CDS             263174..263419
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040091"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040091 identified by Glimmer3 with a raw
FT                   score of 11.20. Gene function extrapolated from CJE0308
FT                   (CP000025.1) after blastn alignment (96.05 percent identity
FT                   over a 152 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31681.1"
FT                   /translation="MKFENLIREILGKKRFELLKFLCENADENGFIMIKISELEEKLHQ
FT                   SKPTIIATFKFLEEKKLFKRLKNGFYQLNIGDKNDT"
FT   gene            263409..264416
FT                   /locus_tag="C1336_000040092"
FT                   /note="C1336_000040092 identified by Glimmer3 with a raw
FT                   score of 14.56."
FT   CDS             263409..264416
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040092"
FT                   /product="dihydroorotase"
FT                   /note="C1336_000040092 identified by Glimmer3 with a raw
FT                   score of 14.56. Gene function extrapolated from Cj0259
FT                   (AL111168.1) after blastn alignment (96.73 percent identity
FT                   over a 1008 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31682.1"
FT                   /translation="MILKNPLDMHLHLRDNQMLELIAPFSARDFCAAVIMPNLIPPLCN
FT                   LEDLKAYKMRILKACKDENFTPLMTLFFKNYDEKFLQIAKDEIFGIKLYPAGITTNSNG
FT                   GVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVMDRESNFAKIYEKLAKHFPRLKIVM
FT                   EHITTKTLCELLKDYENLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDKEALC
FT                   ELAFSGYEKVMFGSDSAPHPLHTKECCGCAAGVFSAPVILPVLAELFKQNSSKENLQKF
FT                   LSDNACKIYDLKFKEDKILTLEEKEWQVPNVYEDKYNQVVPYMAGEILKFQLKH"
FT   gene            complement(264441..264662)
FT                   /locus_tag="C1336_000040093"
FT                   /note="C1336_000040093 identified by Glimmer3 with a raw
FT                   score of 8.54."
FT   CDS             complement(264441..264662)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040093"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040093 identified by Glimmer3 with a raw
FT                   score of 8.54. Gene function extrapolated from C8J_0237
FT                   (CP000814.1) after blastn alignment (99.09 percent identity
FT                   over a 110 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31683.1"
FT                   /translation="MVKNLIIKFGRLILDAITAISFVVALLYSLFMMFSIGFLAGLLSL
FT                   IVSFIALFLSFFVIYLVIDIRDTLVNKA"
FT   gene            complement(264718..265437)
FT                   /locus_tag="C1336_000040094"
FT                   /note="C1336_000040094 identified by Glimmer3 with a raw
FT                   score of 12.41."
FT   CDS             complement(264718..265437)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000040094"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000040094 identified by Glimmer3 with a raw
FT                   score of 12.41. Gene function extrapolated from CJE0311
FT                   (CP000025.1) after blastn alignment (98.63 percent identity
FT                   over a 365 bp alignment) - for clarity, the original
FT                   product name 'conserved domain protein' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31684.1"
FT                   /translation="MNLWDKKAKTYARYQNTLNTIQKQTFEYLQNLNISFQNKSIIDIG
FT                   CGTGVWTLHLAKEAKEILALDSANTMLEILQEDAKKLNLNNIKCENLSFETWMQNNPNA
FT                   KFDLAFLSMSPTLQNEKDYVNFLNLAKIKIYLGWADYRKSDFLDPIFKYFNTEFKGFCK
FT                   KDLESYLLEKNIFFHKIVFDETRKVQRTKEEAIENALWHLSMNKITASKETVSSFVEND
FT                   IIETIESKIKLLIINNL"
FT   gap             265509..266433
FT                   /estimated_length=925
FT   gene            267807..268682
FT                   /locus_tag="C1336_000050000"
FT                   /note="C1336_000050000 identified by Glimmer3 with a raw
FT                   score of 13.05."
FT   CDS             267807..268682
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000050000"
FT                   /product="zinc transporter"
FT                   /note="C1336_000050000 identified by Glimmer3 with a raw
FT                   score of 13.05. Gene function extrapolated from Cj0263
FT                   (AL111168.1) after blastn alignment (96.92 percent identity
FT                   over a 876 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31589.1"
FT                   /translation="MQFTFEQIFIAMLLTLFAGFSTAIGSIIAFFSRKDDLRVLSLGLG
FT                   FSAGVMIYISFMEILPTALKDFKNHYDSHWAELLGLACFFGGILISLLIDKLIPEDVNP
FT                   HEPKEDLSELKICPLPQKGQNPPKFHPGEKLHQINTKALKRTGIFTALAIAIHNFPEGF
FT                   ATFISSLDNLTLGIAIAIAVAIHNIPEGLAVSLPIYHATGDKKKAFIYSALSGFAEPLG
FT                   AFVGALILLPFIGDLTLAISFAVIAGIMVFISLDELLPAAKTYDKAHDSLYGLILGMAI
FT                   MALSLNLLGQ"
FT   gene            complement(268706..271222)
FT                   /locus_tag="C1336_000050001"
FT                   /note="C1336_000050001 identified by Glimmer3 with a raw
FT                   score of 10.93."
FT   CDS             complement(268706..271222)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000050001"
FT                   /product="molybdopterin containing oxidoreductase"
FT                   /note="C1336_000050001 identified by Glimmer3 with a raw
FT                   score of 10.93. Gene function extrapolated from Cj0264c
FT                   (AL111168.1) after blastn alignment (96.74 percent identity
FT                   over a 2517 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31590.1"
FT                   /translation="MLDRRKFLKIGASLSALPLIPSLSAGKTLEASKVSLGLVKNGEVI
FT                   TAAHWGILKLTIKDGKIVKSEPWEKVTKMDNPLQHYTADMVYKSRVKYPYVRKSYLENP
FT                   DNPKPELRGKDEFVRVSYGEAIKLIAKELKKTRDSKGASAIFGGSYGWKSSGNMQNSRI
FT                   LLHRFLNVTGGFVGATGDYSTGASQVIMPYVVGSIEVYEQQTSWENILSDSKYVVIWGA
FT                   DPLSTLRIAWTSNEQRGLAYFEKLKDSKIKVICIDPVKTTTAKFLNAKWIAPRPNTDVA
FT                   LMMGMASHLIAKKKINYEFLDTYTTGFDKFKDYLEGKEDGVKKDTKWASKICGIDEKTI
FT                   KNLAETFYDNPTMIMSGWGMQRAHHGEQPHWMLVTLCAMLGQIGTKGGGFGLSYHYSNG
FT                   GVPTCKGGVIGGMTAGSLGIWNNGKFKGLAKSETSNEGAEWLQNAASYSFPVARIADAL
FT                   LHPGKTIDHNGSKLTYPDIDFIYWVGGNPLVHHQDTNTNVKAWRKPRTVVVNEIYWTPT
FT                   AKMADIVMPATSSYERDDITMTGDYSNMHIVPMKQAVEPVGESKDDYVIFSDICKIYGK
FT                   DVFNAYTENGKKAKDFIKEYYNSALKQTQSFGEAFAAPMPSFEEFWAKNEPITFEPTAE
FT                   SLEWTRFSEFIEDPILNALGTDSGLIEIYSETIKNYNYDDCKAHPTWFEPIEWLGNATK
FT                   EAPFHLLTNHPRDRLHSQLCHTSLRDTYAIKDREPILINSKDAKKLGIKNGDVVRVFNK
FT                   RGEVLAGAVVSDEIMQGVVRLCEGAWYDPNENGLCKCGSVNVLTMDIPTSKLANGNISH
FT                   TGLVNIEKFKGELPKLTAFSAPKGVN"
FT   gene            complement(271233..271808)
FT                   /locus_tag="C1336_000050002"
FT                   /note="C1336_000050002 identified by Glimmer3 with a raw
FT                   score of 11.99."
FT   CDS             complement(271233..271808)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000050002"
FT                   /product="putative cytochrome C-type hem-binding
FT                   periplasmic protein"
FT                   /note="C1336_000050002 identified by Glimmer3 with a raw
FT                   score of 11.99. Gene function extrapolated from Cj0265c
FT                   (AL111168.1) after blastn alignment (97.40 percent identity
FT                   over a 576 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31591.1"
FT                   /translation="MKKIFISFVVLATCLWAENTAYTDEVVSLYLNKDDAKVIGRLLPT
FT                   NPFEVLKSENNKVLLKIDGYVNPKAPSVIYFNDSQRIIVAAFSKNTKLNFSQRITGKDG
FT                   KWDKVSLEIWADQKEFVKDNKEMLSRAKELFVNNCGICHAIHKEKEFTANAWPAIFRSM
FT                   ADRTGIDKKDRWLVIEYLQKNAKDFKTK"
FT   gap             273067..274103
FT                   /estimated_length=1037
FT   gene            complement(274190..274699)
FT                   /locus_tag="C1336_000060000"
FT                   /note="C1336_000060000 identified by Glimmer3 with a raw
FT                   score of 7.63."
FT   CDS             complement(274190..274699)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060000"
FT                   /product="putative membrane protein"
FT                   /note="C1336_000060000 identified by Glimmer3 with a raw
FT                   score of 7.63. Gene function extrapolated from
FT                   JJD26997_1710 (CP000768.1) after blastn alignment (94.06
FT                   percent identity over a 438 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31422.1"
FT                   /translation="MHFTIFHIIAFIILLICFALICILIFLKVKQKEMALISYTIATIF
FT                   TALLIYSIFLTINQFTTQADLSKLTYTRDLRHESVIVSGKVQNLTKFEIRKCYLILSIL
FT                   NQKKVGGEIFNDKNIRNAKMQNTSVSYTIEIIDKLPGNTYKEFRASVPFPPSFDNPEFY
FT                   HTLKCI"
FT   gene            complement(274699..275229)
FT                   /locus_tag="C1336_000060001"
FT                   /note="C1336_000060001 identified by Glimmer3 with a raw
FT                   score of 6.46."
FT   CDS             complement(274699..275229)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060001"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000060001 identified by Glimmer3 with a raw
FT                   score of 6.46. Gene function extrapolated from Cj0267c
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 85 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31423.1"
FT                   /translation="MEKLREIVLFYTTHLYLVDYMLILLVFFLFTCVLLLCVFLRHRPI
FT                   AALFIIAFDIIICFLVYIYGYKLIDNEVRTRKTAITDQKIIQSSNDLIVDFNITNNSKN
FT                   NFKECKITAKIFADKIPNDNIIEEYKKKFIPFRQKSREIKDLKKNATQVQRIAFENFNY
FT                   ENNYTIRLVSECF"
FT   gene            complement(275242..276330)
FT                   /locus_tag="C1336_000060002"
FT                   /note="C1336_000060002 identified by Glimmer3 with a raw
FT                   score of 11.59."
FT   CDS             complement(275242..276330)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060002"
FT                   /product="putative transmembrane protein"
FT                   /note="C1336_000060002 identified by Glimmer3 with a raw
FT                   score of 11.59. Gene function extrapolated from Cj0268c
FT                   (AL111168.1) after blastn alignment (97.39 percent identity
FT                   over a 921 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31424.1"
FT                   /translation="MPADLNDYFNKKNGNSNNNGNNNRQNFNFKAPEFNFKGFGKFSPF
FT                   IYGVIIIILFLIVAKPFMVINSGEMGIKSTTGKYDPNPLEPGLHFFLPFVQKITIIDTR
FT                   VRQINYASIEGSNENLSSGSGVINKNSISVLDSRGLPVSIDVTVQYRLNPLQVPQTIAT
FT                   WSLNWENKIIDPVVRDVVRSVVGKYTAEELPTNRNTIAAQIEEGIRKTIEAQPNEPVEL
FT                   RAVQLREIILPSKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAEGEANATIIS
FT                   AKGKAMAVKIEADAQAYSNKEIANSLNTPLLNLKQIETQKEFNEALKVNQDAKIFLTPG
FT                   GAVPNIWVDTKDAKKQSSANMN"
FT   gene            complement(276343..277257)
FT                   /locus_tag="C1336_000060003"
FT                   /note="C1336_000060003 identified by Glimmer3 with a raw
FT                   score of 15.19."
FT   CDS             complement(276343..277257)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060003"
FT                   /product="branched-chain amino acid aminotransferase"
FT                   /note="C1336_000060003 identified by Glimmer3 with a raw
FT                   score of 15.19. Gene function extrapolated from Cj0269c
FT                   (AL111168.1) after blastn alignment (98.80 percent identity
FT                   over a 915 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31425.1"
FT                   /translation="MISADKIWMDGKLVDFKDATLHFLTHSLHYGNAVFEGTRAYKTDK
FT                   GLAIFRLEDHTKRLLESAKITLLNCPFSQKELENAQIELLKANNFKSNVYIRPLIFLGD
FT                   GVMGLYHIKAPVRVGIAAWEWGAYLGEEGLEKGIKVKISSFARNSVKSCMGKAKVSANY
FT                   LNSQIAKFEAIEAGYEEALMLDEEGFIAEGTGECFFIVKDGVLITPPNDFSLKSITQDT
FT                   VLKIAHDLGVTVLRQRISRDEVYTADEAFFTGTAAEITPINNIDARIIGNGLRGSVTKK
FT                   LQDAYFDVVYGRNQKYASMLTYI"
FT   gene            277434..277640
FT                   /locus_tag="C1336_000060004"
FT                   /note="C1336_000060004 identified by Glimmer3 with a raw
FT                   score of 14.40."
FT   CDS             277434..277640
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060004"
FT                   /product="4-oxalocrotonate tautomerase family protein"
FT                   /note="C1336_000060004 identified by Glimmer3 with a raw
FT                   score of 14.40. Gene function extrapolated from CJE0319
FT                   (CP000025.1) after blastn alignment (97.58 percent identity
FT                   over a 207 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31426.1"
FT                   /translation="MPLVNIKLAKPSLSKEQKAELIADITKLLSTKYNKSKERVVVVLE
FT                   DVESYDIGFGGESVEAIKAKASK"
FT   gene            277637..278092
FT                   /locus_tag="C1336_000060005"
FT                   /note="C1336_000060005 identified by Glimmer3 with a raw
FT                   score of 15.08."
FT   CDS             277637..278092
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060005"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060005 identified by Glimmer3 with a raw
FT                   score of 15.08. Gene function extrapolated from Cj0271
FT                   (AL111168.1) after blastn alignment (94.96 percent identity
FT                   over a 456 bp alignment) - for clarity, the original
FT                   suspect product name 'bacterioferritin comigratory protein
FT                   homolog' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31427.1"
FT                   /translation="MSLNIGDKAPQFELLNQDGVKIALKDFIGKKVILYFYPKDNTPGC
FT                   TTEACDFSLNYDKFGDKNAVIIGISPDSVASHEKFISKFDLKHILLSDSEKEIAKAYGA
FT                   WGIKKNYGKEYEGIIRSTFVIDETGKIAQIYSNVRVKDHALKVLESL"
FT   gene            278092..279183
FT                   /locus_tag="C1336_000060006"
FT                   /note="C1336_000060006 identified by Glimmer3 with a raw
FT                   score of 13.61."
FT   CDS             278092..279183
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060006"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060006 identified by Glimmer3 with a raw
FT                   score of 13.61. Gene function extrapolated from
FT                   JJD26997_1698 (CP000768.1) after blastn alignment (97.65
FT                   percent identity over a 850 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31428.1"
FT                   /translation="MLVHICCSVDSHYFIEELRKTYPDEKIIGYFYDPNIHPLSEYELR
FT                   FLDVKRSCDKLGIKLYKGEYEYEKWLNAVRGYENEPEKGARCEICFDVRMGSSVKFAAK
FT                   IGEKKLTTTLLTSPKKDLEQLKNALQKECEPYGVEFLAPDFRKNGGTQRQFALAKKEML
FT                   YHQNYCGCIYGLKKQKQDKNFIDELMSPVNKQILPASIEARIALYKKIVLWEKKGIKFE
FT                   ILREKFLNYRLLSALIKLDKKPVKSHILFYSHFKNAYTRFSLDEENLKQNLKEGFYRST
FT                   KDEMVFVEFWRFNAFFKNKWKNFEDFLKRPLSVQAETKWRNKLFGTYNLSPIIILENIL
FT                   PSRYEVIAKSEIYHDNQEVLVEI"
FT   gene            279278..279718
FT                   /locus_tag="C1336_000060007"
FT                   /note="C1336_000060007 identified by Glimmer3 with a raw
FT                   score of 15.93."
FT   CDS             279278..279718
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060007"
FT                   /product="(3R)-hydroxymyristoyl-[acyl carrier protein]
FT                   dehydratase"
FT                   /note="C1336_000060007 identified by Glimmer3 with a raw
FT                   score of 15.93. Gene function extrapolated from Cj0273
FT                   (AL111168.1) after blastn alignment (99.09 percent identity
FT                   over a 441 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31429.1"
FT                   /translation="MIDVMQIQEILPHRYPFLLVDKITELKVKEVVRGYKNISISDHVF
FT                   MGHFPGHPIYPGVLILEGMAQTGGVLAFESMEDKVDPKSKVVYFTGIDGAKFRNPVRPG
FT                   DRLDYEMSVVKNRGNMWIFKGQAFVDGNLVAEAELKAMIVDK"
FT   gene            279718..280509
FT                   /locus_tag="C1336_000060008"
FT                   /note="C1336_000060008 identified by Glimmer3 with a raw
FT                   score of 14.05."
FT   CDS             279718..280509
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060008"
FT                   /product="acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine
FT                   O-acyltransferase"
FT                   /note="C1336_000060008 identified by Glimmer3 with a raw
FT                   score of 14.05. Gene function extrapolated from
FT                   CJJ81176_0301 (CP000538.1) after blastn alignment (98.34
FT                   percent identity over a 661 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31430.1"
FT                   /translation="MKKIHPSAVIEEGAQLGDDVVIEAYAYVGKDTKIGNDVVIKQGAR
FT                   ILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKGDG
FT                   FTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVG
FT                   EGCMIAGASALSQDIVPFCLAEGNRASIRSLNLVGIRRRFDKDEVDRLSRAFKTLFRQG
FT                   DLKENAKNLLENQESENVKKMCHFILETKRGIPVYRGKNNA"
FT   gene            280502..281725
FT                   /locus_tag="C1336_000060009"
FT                   /note="C1336_000060009 identified by Glimmer3 with a raw
FT                   score of 16.46."
FT   CDS             280502..281725
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060009"
FT                   /product="ATP-dependent Clp protease, ATP-binding subunit
FT                   ClpX"
FT                   /note="C1336_000060009 identified by Glimmer3 with a raw
FT                   score of 16.46. Gene function extrapolated from
FT                   CJJ81176_0302 (CP000538.1) after blastn alignment (98.77
FT                   percent identity over a 1224 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31431.1"
FT                   /translation="MPRKCSFCNEVENPQRRILANENDDAFICEYCVEGAYSIIYGEEK
FT                   EFKEPKQSHNTEFKDITPKELKAYLDRYIIGQDRAKKVFSVGVYNHYKRLFKAELQDDD
FT                   TELFKSNILLVGPTGSGKTLLAQTLAKFLDVPIAICDATSLTEAGYVGEDVENILTRLL
FT                   QAADGDVQRAQKGIVFIDEIDKIARMSENRSITRDVSGEGVQQALLKIIEGSLVNIPPK
FT                   GGRKHPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGFFDDAKEENKALLEKI
FT                   EPDDLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIKQYQKLFAIDGVNLK
FT                   FEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYKNYDIVITKEVVKDNAKA
FT                   LLIKRKIS"
FT   gene            281736..282776
FT                   /locus_tag="C1336_000060010"
FT                   /note="C1336_000060010 identified by Glimmer3 with a raw
FT                   score of 16.52."
FT   CDS             281736..282776
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060010"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060010 identified by Glimmer3 with a raw
FT                   score of 16.52. Gene function extrapolated from Cj0276
FT                   (AL111168.1) after blastn alignment (98.75 percent identity
FT                   over a 1041 bp alignment) - for clarity, the original
FT                   suspect product name 'homolog of Escherichia coli rod
FT                   shape-determining protein' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31432.1"
FT                   /translation="MILDQLIGFFSSDMGIDLGTANTLVLIKDKGIVINEPSVVAVERE
FT                   RYGSKAKILAVGKEAKDMVGKTPGNIEAIRPMKDGVIADFDMTEKMIRYFIEKTHRRKS
FT                   FLRPRIIISVPYGLTQVERKAVRESALSAGAREVFLIEEPMAAAIGASLPIQEPKGNLV
FT                   VDIGGGTTEIGVISLGGLVISKSIRTAGDKLDMSIVNYVKEKYNLIIGERTGEEIKITI
FT                   GSAIQLPKELSMVVKGRDQVSGLLSRIELTSEDVREAMREYLKEIADALKMVLEMMPPD
FT                   LASDIVENGVVLTGGGALIRGLDKYLSEIVRLPVYIADEPLLAVAKGTGKALEEISLLQ
FT                   QLTNEE"
FT   gene            282766..283515
FT                   /locus_tag="C1336_000060011"
FT                   /note="C1336_000060011 identified by Glimmer3 with a raw
FT                   score of 6.99."
FT   CDS             282766..283515
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060011"
FT                   /product="rod shape-determining protein MreC"
FT                   /note="C1336_000060011 identified by Glimmer3 with a raw
FT                   score of 6.99. Gene function extrapolated from
FT                   JJD26997_1693 (CP000768.1) after blastn alignment (95.90
FT                   percent identity over a 683 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31433.1"
FT                   /translation="MKNKIFYVLVLAFLVFISFYYGRLIKQNVLRVNDFVIGNFYNIKD
FT                   YLKEKISEHFNQASQIQQLKARNKELEDIAVKVTSFANQLNRILEDQNSTKYLPQVSLT
FT                   RVISYVQLNDYKKLWLDWSKIPVGKNRGLIYQGYTAGIAINKDGRTMALLQGDDQCVFS
FT                   VYIGKSKAPGLIQGENGKVVVKFIPKWAKINVGDEILTSGLDNIFFSDVPVGIVNRVDD
FT                   EDMYQSVEVKPYVKISIPAYLYVVDNL"
FT   gene            283776..287045
FT                   /locus_tag="C1336_000060012"
FT                   /note="C1336_000060012 identified by Glimmer3 with a raw
FT                   score of 15.20."
FT   CDS             283776..287045
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060012"
FT                   /product="carbamoyl-phosphate synthase, large subunit"
FT                   /note="C1336_000060012 identified by Glimmer3 with a raw
FT                   score of 15.20. Gene function extrapolated from CJE0327
FT                   (CP000025.1) after blastn alignment (98.53 percent identity
FT                   over a 1424 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31434.1"
FT                   /translation="MPKRTDIKSILLIGSGPIVIGQACEFDYSGTQAAKTLKELGYRVV
FT                   LINSNPATIMTDPEFADATYIEPITKESILSIIKKEKIDAILPTMGGQVALNVAMEVYE
FT                   SGLLGDVKFLGANPEAIKKGEDRQVFKECMKKIGMDLPKSMYAYNYDEALKAVDEIGFP
FT                   LMIRASYTLGGAGSGVVYNMDEFKELANTALALSPIHEILIEESLLGWKEYEMEVIRDR
FT                   ADNCIIVCSIENIDPMGVHTGDSITIAPALTLTDKEYQVMRNASFAILREIGVDTGGSN
FT                   VQFAINPKNGRMIVIEMNPRVSRSSALASKATGYPIAKVATLLAVGFSLDEIKNDITGT
FT                   PASFEPVIDYIVTKIPRFTFEKFPGANTTLGTAMKSVGEVMAIGRTFKESIQKALCSLE
FT                   RSLSGFDRVKFEDRNDLVFKIRNANEKRLLYVAQAFREGFSVEELYELCKIDPWFLTQI
FT                   KEIVDFEEQIDMDILNNKALLRKAKTMGFSDKMIALLVNLKDNLELSQNDIYYARMKQK
FT                   IIAEFSEVDTCAGEFEALTPYLYSSINVSELTQSKNDTKDKKEKKVMIIGGGPNRIGQG
FT                   IEFDYACVHASFALKDMGIKTIMYNCNPETVSTDYDTSDILYFEPIDFEHLRAVIEREK
FT                   PDGVIVHFGGQTPLKFAKRLSAFGAKIIGTSARVIDMAEDRKKFAEFITKLGINQPKNS
FT                   TATSVEEAVLKASDIGYPVLVRPSYVLGGRAMRVVNDEAELRLYMQEAVDVSDKSPVLI
FT                   DQFLDNATEIDVDAICDGKDVYVAGIMEHIEEAGIHSGDSACSLPPCSIDEKMQEFIAQ
FT                   KTADIALNLGVVGLLNIQFALHHNELYMIEVNPRASRTVPFVSKATGIPLAKVATRVMW
FT                   QGNLKEALKFYDTFKVVNFDTKILRAKTPKYMSVKEAVFPFAKLSGSDLELGPEMRSTG
FT                   EVMGISKDFANSYAKSQIASFNHLPEQGVVFISLKDKDKKYTKKIAAEYVKLGFKLMAT
FT                   GGTCKEILESGFECELVHKISEGRPNVEDKLKNGEIHLVINTSDSHSFKGDTKKIRENI
FT                   IRFKIPYFTNLRSALAGAKSIKAIQSKSCLDVKSLQEWLKS"
FT   gene            287042..287464
FT                   /locus_tag="C1336_000060013"
FT                   /note="C1336_000060013 identified by Glimmer3 with a raw
FT                   score of 8.45."
FT   CDS             287042..287464
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060013"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060013 identified by Glimmer3 with a raw
FT                   score of 8.45. Gene function extrapolated from C8J_0256
FT                   (CP000814.1) after blastn alignment (99.44 percent identity
FT                   over a 354 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31435.1"
FT                   /translation="MIYLAQTDTTVGFLSKNLEEINALKGRGKNQPCLITSAKFCELKS
FT                   LARIPKSFKNLVRRSKKTTFIYPNNQAIRIVKECKHANFLSKNGYFYSSSANKHGKEFD
FT                   EEWARSVADIILDEKFFENIPSKILKLSKNKMIKIR"
FT   gene            complement(287465..288442)
FT                   /locus_tag="C1336_000060014"
FT                   /note="C1336_000060014 identified by Glimmer3 with a raw
FT                   score of 10.88."
FT   CDS             complement(287465..288442)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060014"
FT                   /product="transaldolase"
FT                   /note="C1336_000060014 identified by Glimmer3 with a raw
FT                   score of 10.88. Gene function extrapolated from
FT                   CJJ81176_0307 (CP000538.1) after blastn alignment (99.38
FT                   percent identity over a 800 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31436.1"
FT                   /translation="MKNFSLWCDFIENSFLDNEFLNLLSHGINGATSNPAIFKNAILNS
FT                   PIYKDKILKLKGKKTKDIYEELAISDIQKAADKLAPLFYQKNDGFISIEIDPRLHDNTT
FT                   LSLGEAKRLYSAISKENVMIKIPATKASYEVMYELMKNGISVNATLIFSLEQSQKCFEA
FT                   LNAGLVEFRKNNIALKEQNTRTPQAVISIFVSRFDRLLNPKAKEQNRIGILNANLAYNN
FT                   IYSKNEPNIRALFASTGVKGDDLPKDYYIKELLFENSVNTAPLDAIEVFKGKMDFKKPL
FT                   MNFEIYTELNQIISQSEREKACNDLLSDGLEQFCIAFEDILKAL"
FT   gene            complement(288442..289065)
FT                   /locus_tag="C1336_000060015"
FT                   /note="C1336_000060015 identified by Glimmer3 with a raw
FT                   score of 8.91."
FT   CDS             complement(288442..289065)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060015"
FT                   /product="phosphoserine phosphatase SerB"
FT                   /note="C1336_000060015 identified by Glimmer3 with a raw
FT                   score of 8.91. Gene function extrapolated from CJE0330
FT                   (CP000025.1) after blastn alignment (98.08 percent identity
FT                   over a 624 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31437.1"
FT                   /translation="MIKLCVFDFDATLMDGETIDILATAHGKGDQTSEITHHAMAGELD
FT                   FFESLQKRVSLLKGMSYKKVLELSSTLPLMHGAHELIQYLKSKNIQIVIFSGGFHEGID
FT                   PAMQKLGINLGFANYLHHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVMCVG
FT                   DGANDLAMFNESGLKIAFCAKEILRSQADICIDIKDLKEIIKAI"
FT   gene            complement(289065..289586)
FT                   /locus_tag="C1336_000060016"
FT                   /note="C1336_000060016 identified by Glimmer3 with a raw
FT                   score of 10.39."
FT   CDS             complement(289065..289586)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060016"
FT                   /product="purine-binding chemotaxis protein CheW"
FT                   /note="C1336_000060016 identified by Glimmer3 with a raw
FT                   score of 10.39. Gene function extrapolated from
FT                   CJJ81176_0309 (CP000538.1) after blastn alignment (99.23
FT                   percent identity over a 522 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31438.1"
FT                   /translation="MSNEKLEQILQKQQTQMAGPDVDQREDDIIQLVGFVVGDEEYAIP
FT                   ILNIQEIIKPIEYTRVPSVPDYVLGVFNMRGNVMPLIDLAQRFHLGSSKMTPQTRYIVL
FT                   RGETNGTGVGGNAGFVIDRLTEAIKIHRNRIDPPPETLVKDKGMIYGIGKRDENILTIL
FT                   KVEALLKREF"
FT   gene            complement(289591..291900)
FT                   /locus_tag="C1336_000060017"
FT                   /note="C1336_000060017 identified by Glimmer3 with a raw
FT                   score of 11.44."
FT   CDS             complement(289591..291900)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060017"
FT                   /product="chemotaxis protein CheA"
FT                   /note="C1336_000060017 identified by Glimmer3 with a raw
FT                   score of 11.44. Gene function extrapolated from C8J_0260
FT                   (CP000814.1) after blastn alignment (98.18 percent identity
FT                   over a 2310 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31439.1"
FT                   /translation="MEDMQEILEDFLVEAFELVEQIDHDLVELESNPEDLELLNRIFRV
FT                   AHTVKGSSSFLNFDVLTKLTHHMEDVLNKARHGELKITPDIMDVVLESIDRMKTLLNSI
FT                   RDNGNDTAIGMDIEPICARLTAISEGESPVGATDLNEKSTPQAEPEAPKQETTTPEPEV
FT                   DVNQLSDSEVEAEIERLLKVRKAEDQARRAQKKQTTNAAPKPTNNTANKPAESGEKKVP
FT                   ASGSNASSMDQTIRVEVKRLDHLMNLIGELVLGKNRLLKIYDDVEERYEGEKFLEELNQ
FT                   VVSQLSIITTDVQLAVMKTRMQPIAKVFNKFPRVVRDLSRELGKQIELEITGEETELDK
FT                   SIVEEIGDPIMHMIRNSCDHGVEDPATRAANGKPEKGIVQLKAYNEGNHIVVEITDDGK
FT                   GLDPNGLKAKAIEKNLITEREADQMTDKEAFALIFKPGFSTAAKVTNVSGRGVGMDVVK
FT                   TNIEKLNGVIEIDSELGKGSSFKLKIPLTLAIIQSLLVGTQEEFYAIPLASVLETVRVP
FT                   IDDIYTIEGKNVLRLRDEVLSLVRLSDVFGVKQVLESGDQTYVVVIGVAESKLGIIVDT
FT                   LVGQEEIVIKSMGDYLQNIQGIAGATIRGDGRVTLIIDVGAMMDMAKEIKVDIKAQLES
FT                   SAKKPKEQPSDYKVLIVDDSKMDRTLMQKALEPLGVSLVEATNGVEALNIIKSGEHDID
FT                   AMLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTSRTSKTDRLRGVEVGMTEYITKPY
FT                   SPEYLENVVRKNLKLG"
FT   gene            complement(291904..292860)
FT                   /locus_tag="C1336_000060018"
FT                   /note="C1336_000060018 identified by Glimmer3 with a raw
FT                   score of 10.96."
FT   CDS             complement(291904..292860)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060018"
FT                   /product="chemotaxis protein"
FT                   /note="C1336_000060018 identified by Glimmer3 with a raw
FT                   score of 10.96. Gene function extrapolated from C8J_0261
FT                   (CP000814.1) after blastn alignment (99.58 percent identity
FT                   over a 957 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31440.1"
FT                   /translation="MFDENIVKTGSNEMELVDFRIFKQGHDKVYEGIYGVNVSKVREII
FT                   KIPSLTELPGVPDYIEGIFDLRGVVIPVVNLAKWMQITEPESTMLKPRVIITEFSNILI
FT                   GFIVHEAKRIRRINWKDIEPATFSTGSGALDKGKITGVTRIENDEVLLILDLESVVEDL
FT                   GIYAPKTDIDFGKIEKFTGTALILDDSMTARKRVKEMMQQMGFQVVEAKDGVEGINKLE
FT                   ELSQVYGESLNDTLKIIVSDVEMPQMDGFHFAARIKEDPRFKDIPIVFNSSLSNEFMNE
FT                   KGVQEAGGEGYLVKFNASDFFNEIAKVIKKHQSQEQG"
FT   gene            complement(292853..293488)
FT                   /locus_tag="C1336_000060019"
FT                   /note="C1336_000060019 identified by Glimmer3 with a raw
FT                   score of 8.24."
FT   CDS             complement(292853..293488)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060019"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060019 identified by Glimmer3 with a raw
FT                   score of 8.24. Gene function extrapolated from
FT                   CJJ81176_0312 (CP000538.1) after blastn alignment (99.48
FT                   percent identity over a 191 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31441.1"
FT                   /translation="MGDIFDLLIGEISATHEFAKPYIELLEELALKIEIIYLEGNHDFN
FT                   LSCFFKRVKIFNLQKQPIKLNLHTSKGNNLVLNNAFIKLAHGDIFLPPLLQFTLKTLRN
FT                   HYLLIFLNFLNIITCNFISNKILQNQNKKNLFYQIKDFENLAKKRYERYENLGFWVCEG
FT                   HYHQNHQINKENIKYLNLASFAYERSFFVVEYQQEIKFREQKLRGQNV"
FT   gene            complement(293621..294106)
FT                   /locus_tag="C1336_000060020"
FT                   /note="C1336_000060020 identified by Glimmer3 with a raw
FT                   score of 16.58."
FT   CDS             complement(293621..294106)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060020"
FT                   /product="transcription elongation factor"
FT                   /note="C1336_000060020 identified by Glimmer3 with a raw
FT                   score of 16.58. Gene function extrapolated from C8J_0263
FT                   (CP000814.1) after blastn alignment (96.50 percent identity
FT                   over a 486 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31442.1"
FT                   /translation="MQKEPMSQFGYDKLAAELKDLKDNQRPAVVIEIDTARSHGDLKEN
FT                   AEYHAAREKQALIESRIAELSDLLARAQVIDPSSYEHDSVKFGSSVVIMDLDTEKESKY
FT                   TLVGICEGDLDKGYISIASPIAKAMLGKKEGDDFKVRLPKGESEFEILSINYEPLKF"
FT   gene            complement(294118..295212)
FT                   /locus_tag="C1336_000060021"
FT                   /note="C1336_000060021 identified by Glimmer3 with a raw
FT                   score of 16.26."
FT   CDS             complement(294118..295212)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060021"
FT                   /product="lipid-A-disaccharide synthase"
FT                   /note="C1336_000060021 identified by Glimmer3 with a raw
FT                   score of 16.26. Gene function extrapolated from C8J_0264
FT                   (CP000814.1) after blastn alignment (96.59 percent identity
FT                   over a 821 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31443.1"
FT                   /translation="MKTFLVCALEPSANLHLKEVLKAYKKDFGEFEIHGIYDESLCKEF
FT                   DLNSKPLYSSHEFSAMGFIEVLPLIFKAKKAIKELVNLSFTQKMDGILCIDSPAFNIPF
FT                   AKALKKAGSKIPRIYYILPQVWAWKKGRIPIIESHFDILASILPFDNQFFNKSTYVGHP
FT                   LLDEIKEFKNKEDINNILLKKDDEKTIAFLPGSRRSEIRRLMPIFKELSQKFKGEKILC
FT                   VPPFNLEKLEIYGDISEFKIESNTPKVLKKADFAFICSGTATLEAALVGTPFVLAYKAK
FT                   AIDIFIAKLFVKLKHIGLANIFCDFAGKEALNPEFLQDKVNVLNLYEAYNKYDYKAFFA
FT                   KVYFLKEYLQFGSAKNLAKILSEI"
FT   gene            complement(295209..298046)
FT                   /locus_tag="C1336_000060022"
FT                   /note="C1336_000060022 identified by Glimmer3 with a raw
FT                   score of 12.17."
FT   CDS             complement(295209..298046)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060022"
FT                   /product="putative type III restriction enzyme R protein"
FT                   /note="C1336_000060022 identified by Glimmer3 with a raw
FT                   score of 12.17. Gene function extrapolated from
FT                   JJD26997_1682 (CP000768.1) after blastn alignment (96.59
FT                   percent identity over a 264 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31444.1"
FT                   /translation="MAKAKQNIKKHLLLNKFINDKSLVQKLDESYDFSNFSQAINLQFY
FT                   QQESVKNALAILSFYMMDELNSHEYNQERRRLLEFYQDESENLKLQKEDIAKASFWMAT
FT                   GSGKTIVMIKLIALIHEFIKNNQLPKKPIMLLAPNDKILNQFKANIAKYNNHHGNFIKI
FT                   KDLKDFESIEKEASLLNEVVVYFARSDLLESEENVGKDKKAKRLNYKNYLNKDGWYILL
FT                   DEAHRGDSKTSLRKNYYHELARGFIKEDEFPKGFVFNFSATFEDEIDFITCAYNYNLQK
FT                   FNQEGYGKNIAVLNENLDFKSENNEEAKIKTILESFIIFNAIIKTKEELILKRQDFVYH
FT                   NPLIIAVSDKVNTQDAGIKAYFKAVHNVLKNKVDVSNIALELYEKLQNQNLHFSINTLS
FT                   DDFLKYIKNANNDELRENIFYANANANLECYSIKGNDKELAFKSKNSNKPFMLLNISNA
FT                   KEWEKNFLLELGVESISDISQSHFENINSSQSSINIMLGSKVFSEGWDSNRVNLISFIN
FT                   IGSINAKKYVLQTIGRGVRIEPFLNIRKRLNALKEMFKIDEQCINLACGLETLFVMASD
FT                   NEAIKAIIEGIECEFMESKHLKGFKETKLSFDLPVPKYKNESKLNNIYKISKREANSLK
FT                   EFVNSYDEDVLILEQCLYKSFKYSTLQEFEKFINGEKSRIQSSGDRVEFNEKTTLKTIN
FT                   SVLNSNAKVLDKFVKLEKEITHHKNIQAKLDFETVQKINKTIKDVLNAKSEDELKVDFE
FT                   NKRINLDELMQGIKESQKSKEVQNYIISAKLSKHYYNPLIIYNKNDKESKINFAISNES
FT                   EKEFLKELEDNLEFFGQYEWYFSKLVENQDEIYIPYFDEEYQKERKFYPDFIFWLKNKQ
FT                   SGDFFIYFIDPKGLKIEDNPRFKLKGFKMIFENKNLTYEDKNIKVNLFFYNKNKNYVSD
FT                   ELKDFVKSNIEDIFK"
FT   gene            complement(298069..298293)
FT                   /locus_tag="C1336_000060023"
FT                   /note="C1336_000060023 identified by Glimmer3 with a raw
FT                   score of 7.82."
FT   CDS             complement(298069..298293)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060023"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060023 identified by Glimmer3 with a raw
FT                   score of 7.82. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31445.1"
FT                   /translation="MQNNIILYAMQDKKLKVELYEFGDSVYLNQESLVKLFYALRENIT
FT                   MHINNILQNRQLQEISVCKKFLHTTNDNK"
FT   gene            complement(298314..299237)
FT                   /locus_tag="C1336_000060024"
FT                   /note="C1336_000060024 identified by Glimmer3 with a raw
FT                   score of 5.88."
FT   CDS             complement(298314..299237)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060024"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060024 identified by Glimmer3 with a raw
FT                   score of 5.88. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31446.1"
FT                   /translation="MNESELYIYLGQDEHYITLDEMNSIVNTINIISNDLCVKLLSNYQ
FT                   DVSFVICPCEQGSFKLKIKHMLLGSGVCILTWLNESEAGKAFVEGLTGHETPYYYKKAG
FT                   QILGDVIKGVLEKDIFTLEKINNELDNFGYILDKSIKEKSVLYEAINKSKTIKSISFSN
FT                   ENSNAIPKKDFINHIKKGDIIRQLEPSYEILDLIISKSINTKKQGKWTFELLETKKKFN
FT                   AEILDNVFMLKFLDGFYPLKEGNRDDIIKALLRIDSKIKNGNKETEEYFIQEIFNFNKN
FT                   KIKDIPKEFEKYLQVKYDYKIPSLFN"
FT   gene            complement(299237..301552)
FT                   /locus_tag="C1336_000060025"
FT                   /note="C1336_000060025 identified by Glimmer3 with a raw
FT                   score of 11.60."
FT   CDS             complement(299237..301552)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060025"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060025 identified by Glimmer3 with a raw
FT                   score of 11.60. Gene function extrapolated from C8J_0267
FT                   (CP000814.1) after blastn alignment (97.60 percent identity
FT                   over a 417 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31447.1"
FT                   /translation="MDYKKAFYSKLEDCYLGSKIKHSQNQAKNGFTNLLVIKEKYFQKI
FT                   KDYLDTQKLYTDTYNKLYNFFSTYLNETGTPFFYDTPMYKNIYARVYSNSKDTNLFYKT
FT                   QNLYYVKSDTIYNPLSLQSEDKKYTLNFLTDEYEQNADNNRSKINFYLQNIQDDNINIK
FT                   VINSKNHDGTNIFKQNSSEFSDIFLKTLENAKINIKEEELKKLFKTYKKQNEVDFFIHK
FT                   NAKEFLKEQFDLWLFSYVNDSITDWTKEKIDEINTLKQIALNIIDFIADFEDELKAIWL
FT                   KPKFAKNTHYVFSLDTIKSHSNNADEILNSIYKDVNFKEQIAEWKELNFINDEFDIKAI
FT                   NDEKYKFLPFDTKYLSEENYYKLLQSFDNLDEILNGELVKADNFQALNSLMPKYQGKID
FT                   LIYIDPPFNTGSDFDYKDKFQDSTWLSLMHNRLELAKEFLSDKGSFYLHLDYNANYRGR
FT                   ELLNDIFGEENFVNEIVWNYKGTTNTNVKFAPKHDTILYYKTKSHIFNFDDVRIPYEDD
FT                   DKFSIDENGKYYMMWKKDQRYYPPQKFVNNTWILLGKSQYDVWNDIPSMATAHGKEFLN
FT                   FQTQKQEKLLQRIIKASSNENSIVLDFFTGSGTTIATAHKLERKWLGVEMGEHFYKVII
FT                   PRMKKVLNGFVCGISKEVEFKGGGAFRYYELESYEESLENCEYKLDKNSLIDYRKSRKL
FT                   IKALKKGENICLDMNAYDKEFDIFLTMSNLLGLKIKNIFIDENGIKSCKFENDEVINLE
FT                   NIDLIKYQKLKNLIWWEK"
FT   gene            complement(301568..301813)
FT                   /locus_tag="C1336_000060026"
FT                   /note="C1336_000060026 identified by Glimmer3 with a raw
FT                   score of 15.35."
FT   CDS             complement(301568..301813)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060026"
FT                   /product="lipid-A-disaccharide synthase"
FT                   /note="C1336_000060026 identified by Glimmer3 with a raw
FT                   score of 15.35. Gene function extrapolated from Cj0288c
FT                   (AL111168.1) after blastn alignment (96.77 percent identity
FT                   over a 217 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31448.1"
FT                   /translation="MKTFLVCALEPSANLHLKEVLKAYKKDFGEFEIHGIYDENLCKEF
FT                   DLNSKPLYSSHEFSAMGFIEVLPLIFKGKKDIILNL"
FT   gene            complement(302027..302599)
FT                   /locus_tag="C1336_000060027"
FT                   /note="C1336_000060027 identified by Glimmer3 with a raw
FT                   score of 9.27."
FT   CDS             complement(302027..302599)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060027"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060027 identified by Glimmer3 with a raw
FT                   score of 9.27. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31449.1"
FT                   /translation="MKKIVILILVLLSLSKSIEEPGDLSDFTPMFTIRSLQTGISLSPF
FT                   RETSEDLKDQNWILREIILSDELKQKDELGELLRFGYVQFVNPNDDDICLAILESGFFG
FT                   GKSCKQDLKDGKLETIFSIMPTTSSAVQIRSLVEGGRECIKIFYNPNVPIEKRFGIQPC
FT                   TLDSALFLDLNELMFFTPAIIEATPIY"
FT   gene            complement(302614..303420)
FT                   /locus_tag="C1336_000060028"
FT                   /note="C1336_000060028 identified by Glimmer3 with a raw
FT                   score of 8.46."
FT   CDS             complement(302614..303420)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060028"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060028 identified by Glimmer3 with a raw
FT                   score of 8.46. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31450.1"
FT                   /translation="MKKILLIILSINLSFASLEDYNVGTWNLQGSSASTESKWNISIRQ
FT                   LVTGSNPMDVLAVQEAGVLPSTATMTQRQVQPVGVGIPIHEYEWNLGTSSRPNSVFIYY
FT                   SRVDVGANRVNMAIVSRRQADEVIVLPPPTVASRPIIGIRICNDVFFNTHALARGGNDA
FT                   GAIVTAVDMHFRNMPLINWMILGDFNRDPNSLMSLLDQGLRNRVHFVSPASYTQASGGV
FT                   LDYAVTGNSDTTRRYTPPAILAILAAAGLRTFLASDHFPVNFRKFF"
FT   gene            complement(303438..304238)
FT                   /locus_tag="C1336_000060029"
FT                   /note="C1336_000060029 identified by Glimmer3 with a raw
FT                   score of 6.50."
FT   CDS             complement(303438..304238)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060029"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060029 identified by Glimmer3 with a raw
FT                   score of 6.50. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31451.1"
FT                   /translation="MQKFHSMIVLSLLLIFFIGCSSKELNPLGRSYGDLHDSDPLKIGK
FT                   TPTIPAKQETPALVDSSDSIPKDVPLEPPVIKTNTFKGNDFIKGPSPRTQSNGEFNNVP
FT                   VYENRGYFSDYITIMGPSGAALTVWALRPGNWIWGYTLYSSRPFGDANVWQLIEFPQNK
FT                   VMIKNVKTLTCLNAYGEGIVHYPCDQSNYAQFWTLLPMDNGAYQIQNLATKQCIQTPIH
FT                   DVMKEFNLSYYKIFLTECVKSGEKNLDRQWYIAPPTYTARNPYR"
FT   gene            304691..305467
FT                   /locus_tag="C1336_000060030"
FT                   /note="C1336_000060030 identified by Glimmer3 with a raw
FT                   score of 12.83."
FT   CDS             304691..305467
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060030"
FT                   /product="acid phosphatase SurE"
FT                   /note="C1336_000060030 identified by Glimmer3 with a raw
FT                   score of 12.83. Gene function extrapolated from
FT                   JJD26997_1670 (CP000768.1) after blastn alignment (96.18
FT                   percent identity over a 393 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31452.1"
FT                   /translation="MKEILITNDDGYESEGLKKLIKMLKKEFKAKITIVAPANEKSACS
FT                   HSITLTKPLRFVKVGKRFYKLDDGTPADCVYLALHALYKTRLPDLVISGINKGANVGED
FT                   ITYSGTCAGAMEAVLQGIPAIALSQFYKKSEKELDYKNALKITKKIIQNIFDKGFPLEK
FT                   KEFLNINFPAKSKIKGIKICKAGKRVYNFEAHSNVNPRGVEYYWLAAANLDFEDEKNSD
FT                   IALLKKGYATITPIMLDLTAYKRMKKVKKWLKANDE"
FT   gene            305460..306122
FT                   /locus_tag="C1336_000060031"
FT                   /note="C1336_000060031 identified by Glimmer3 with a raw
FT                   score of 16.51."
FT   CDS             305460..306122
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060031"
FT                   /product="MoeB/ThiF family protein"
FT                   /note="C1336_000060031 identified by Glimmer3 with a raw
FT                   score of 16.51. Gene function extrapolated from C8J_0271
FT                   (CP000814.1) after blastn alignment (95.71 percent identity
FT                   over a 536 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31453.1"
FT                   /translation="MNDRFTRIKWLVGEEKFQKISQTKVLVCGLGGVGGICVDALYRSG
FT                   FKNLTLIDADKFEITNQNRQIHSENIGKEKAKVFERIYKAKGIISKIDENFLKNFDLSE
FT                   FDLIIDAIDDIPAKVALAHLIDFKKQIFISSTGGARKLDPTRIKTTSIFKTHGDALAKK
FT                   FRYELRKSGFKGNFDVVFSDEEAHCKDLGSFMGVTASFGLALASLAMRKVLSKYKEQ"
FT   gene            306119..306868
FT                   /locus_tag="C1336_000060032"
FT                   /note="C1336_000060032 identified by Glimmer3 with a raw
FT                   score of 12.68."
FT   CDS             306119..306868
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060032"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060032 identified by Glimmer3 with a raw
FT                   score of 12.68. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31454.1"
FT                   /translation="MRNFIVFILFLNIAIGEDKILGNFFKDCNTSGTFIVFDGKNYASN
FT                   DFKRAKQAFSPASTFKIFNALIALDNGVVRDTKEIFYHYKGEKVFLPSWKQDASLSSAI
FT                   KRSQVPAFKELARKIGLKTMQESLNKLSYGNAKISKIDTFWLDNSLQISAKNQADLLFK
FT                   LSQNSLPFSKKIQEEVKEIILFKEDKIQKIYAKTGFNDNINLAWIVGFVKTENKILSFA
FT                   LNVDIKDIKNIKIREELLEKYLAIITN"
FT   gene            complement(306865..307641)
FT                   /locus_tag="C1336_000060033"
FT                   /note="C1336_000060033 identified by Glimmer3 with a raw
FT                   score of 16.66."
FT   CDS             complement(306865..307641)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060033"
FT                   /product="TraT complement resistance protein"
FT                   /note="C1336_000060033 identified by Glimmer3 with a raw
FT                   score of 16.66. Gene function extrapolated from
FT                   JJD26997_0965 (CP000768.1) after blastn alignment (95.04
FT                   percent identity over a 726 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31455.1"
FT                   /translation="MKKSIFKITLSSVLAASLLTGCLTTTLQTNATMSQSIFLDPVAKE
FT                   KRIVFLNIKNTSGHDVNLEPKLRSALEAKGYKVIDDPDKANYILSTNILYCDKKQENNA
FT                   VGGAVAGGATGVAVSGYNGGGAGGMVAAGAAGALVGGLLGKLTEDTIWQMQVDINIKQK
FT                   ADGKVLTSSGNVSGQASVRDSQSSGFLNSFGGNVRSDKVGHLNSNQINNTQQTYEGKYI
FT                   EKNTIIFAEAVKTGLKLPEATPILEDKIANQIAGLF"
FT   gene            complement(307651..308163)
FT                   /locus_tag="C1336_000060034"
FT                   /note="C1336_000060034 identified by Glimmer3 with a raw
FT                   score of 10.50."
FT   CDS             complement(307651..308163)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060034"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060034 identified by Glimmer3 with a raw
FT                   score of 10.50. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31456.1"
FT                   /translation="MKKIFLFCIFYTTVIFANPMPFGLELGKANFDEVVKKYPNFSNAG
FT                   TSIYTGGKIIEVSSSDFELEGLKDKVLFIFDKENRLTLVQLKFHKDRFNDILSSLSKYK
FT                   IIKKEVPYVGNRYVKLQDGDCKIELESPHLSFEMYLTYKTNQFEKLYKDYIKKEEQERK
FT                   NKQNSIL"
FT   gene            308230..308517
FT                   /locus_tag="C1336_000060035"
FT                   /note="C1336_000060035 identified by Glimmer3 with a raw
FT                   score of 4.75."
FT   CDS             308230..308517
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060035"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060035 identified by Glimmer3 with a raw
FT                   score of 4.75. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31457.1"
FT                   /translation="MFVILHLLFYHSKNNNLGIQIGTRIRYFFNKIVEKVKKERKKRKI
FT                   SQLMLASILGHKSPNYIAKIETRKHGANYNLAHLYQISKEFGIDIKDLMP"
FT   gene            complement(308514..309392)
FT                   /locus_tag="C1336_000060036"
FT                   /note="C1336_000060036 identified by Glimmer3 with a raw
FT                   score of 16.55."
FT   CDS             complement(308514..309392)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060036"
FT                   /product="molybdate transport system ATP-binding protein"
FT                   /note="C1336_000060036 identified by Glimmer3 with a raw
FT                   score of 16.55. Gene function extrapolated from C8J_0277
FT                   (CP000814.1) after blastn alignment (96.96 percent identity
FT                   over a 230 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31458.1"
FT                   /translation="MIKIDINHPMNTAKGRLDLNFKKDIESGKITALFGESGTGKTTLL
FT                   KIIAGLIEPKFGRIEVDNELWFDSSKNFSLALQKRKIGFVFQDYALFPNMNVKENIAYA
FT                   ASSKAKVDELLALMGLENLAKIYPKHLSGGQAQRVALARTLVREPKILLLDEPLSALDF
FT                   KMRANLQDELAKILEYFKISTLLVSHDLAEIYKLSHRILELKNGKIIKDFPKNEFFTHS
FT                   SISAKLRLSATLLEIKKSDILVVLTLLLNQDIIKITLSEEEFLKAYQDIKIGDTLILSV
FT                   KAFNPIIVGKI"
FT   gene            complement(309389..310063)
FT                   /locus_tag="C1336_000060037"
FT                   /note="C1336_000060037 identified by Glimmer3 with a raw
FT                   score of 14.12."
FT   CDS             complement(309389..310063)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060037"
FT                   /product="molybdate transport system permease protein"
FT                   /note="C1336_000060037 identified by Glimmer3 with a raw
FT                   score of 14.12. Gene function extrapolated from C8J_0278
FT                   (CP000814.1) after blastn alignment (97.88 percent identity
FT                   over a 283 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31459.1"
FT                   /translation="MLDPDFLQTLYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKTI
FT                   LQSFISLPLILPPSVLGFYLLVTFSANSFLGQVLKEYFNLSLVFTFEGLVFASLIFSLP
FT                   FMVNPLQSAFSSINPNLLDASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTVGEF
FT                   GVVMMIGGHKQGETLVASIAIYDELEILNYSLAHQYAFILFIFSFLVLFSLYFVNKKMS
FT                   FQ"
FT   gene            complement(310056..310457)
FT                   /locus_tag="C1336_000060038"
FT                   /note="C1336_000060038 identified by Glimmer3 with a raw
FT                   score of 15.80."
FT   CDS             complement(310056..310457)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060038"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060038 identified by Glimmer3 with a raw
FT                   score of 15.80. Gene function extrapolated from C8J_0279
FT                   (CP000814.1) after blastn alignment (96.85 percent identity
FT                   over a 222 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31460.1"
FT                   /translation="MNLIKGQICELLNQEDIVIVKILSKEVIFSVLMLELKSLENLKIG
FT                   ASVELLFKEHELCFSTSKTLLSVENSFLAKITKIKKGELLYQVFFDFKGNELSSIITKE
FT                   KALELELCENQEWLCFVKANDIVLRSHSA"
FT   gene            complement(310454..311203)
FT                   /locus_tag="C1336_000060039"
FT                   /note="C1336_000060039 identified by Glimmer3 with a raw
FT                   score of 16.11."
FT   CDS             complement(310454..311203)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060039"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060039 identified by Glimmer3 with a raw
FT                   score of 16.11. Gene function extrapolated from
FT                   JJD26997_1663 (CP000768.1) after blastn alignment (97.39
FT                   percent identity over a 115 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31461.1"
FT                   /translation="MKKFVVFFGILLFVSCLNAQNLSIFVASSASKAMSEVKDEFLKTH
FT                   PEDKIELVFGASGKYYELLKQGREFDLFFSADTKYAKAIYDDKNALIKPKIYVLGVLAL
FT                   YSLDENLLQGGIENLKEKAGKITHLSIANPKVAPYGVAAKEVLENLDLNELFKDKIVLG
FT                   ENISVPVLHVDSKNADIAIVAYSLVSPINHPKGKAIIIDTKYFSPLEQSYVITKYAKDK
FT                   KLAFEFSEFIGSSKAKEIFKKYGFSTP"
FT   gene            complement(311254..311940)
FT                   /locus_tag="C1336_000060040"
FT                   /note="C1336_000060040 identified by Glimmer3 with a raw
FT                   score of 15.14."
FT   CDS             complement(311254..311940)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060040"
FT                   /product="putative biotin synthesis protein"
FT                   /note="C1336_000060040 identified by Glimmer3 with a raw
FT                   score of 15.14. Gene function extrapolated from C8J_0281
FT                   (CP000814.1) after blastn alignment (97.38 percent identity
FT                   over a 458 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31462.1"
FT                   /translation="MNFLKAKDYEKHAKVQDFMGLKLCEILKDLKISHFEKVFEFGCGR
FT                   GELSKKLQNFITFDEYLKNDILDFKENSNILIFDMNEIAKQDLSKEKFDLIVSNATLQW
FT                   LDLKRILPSLRDMLNQNGILLLSTFAEQNLKEIKQSTGFGLKYFSLNELEQIFKVYFNE
FT                   VKITQELIKLSFDNALDVFRHLKLSGVNSLGFYPLNKSFLKEFEEKFQNKLTYHPVFIL
FT                   CKNDIK"
FT   gene            complement(311937..312548)
FT                   /locus_tag="C1336_000060041"
FT                   /note="C1336_000060041 identified by Glimmer3 with a raw
FT                   score of 16.44."
FT   CDS             complement(311937..312548)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060041"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060041 identified by Glimmer3 with a raw
FT                   score of 16.44. Gene function extrapolated from C8J_0282
FT                   (CP000814.1) after blastn alignment (94.19 percent identity
FT                   over a 344 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31463.1"
FT                   /translation="MKYEFLCKNPDSKKLIVVFGGFASHPSHFSHLKSDKNVILFYDYE
FT                   NFDLNFNFKAFDELFLIAFSMGVCVANRLLKELNFKQKIAINGTNLGIDKSKGIHLTIF
FT                   KKTLQNFKLEHFKEALFKERKSLAKDFIFKDEKVLKIELEKLFDFALTKQEENLLWDKV
FT                   YSSKEDEIFPPNALKNSFKNLIFLDEPHFAFFHFKTWDEL"
FT   gene            complement(312545..313687)
FT                   /locus_tag="C1336_000060042"
FT                   /note="C1336_000060042 identified by Glimmer3 with a raw
FT                   score of 14.37."
FT   CDS             complement(312545..313687)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060042"
FT                   /product="8-amino-7-oxononanoate synthase"
FT                   /note="C1336_000060042 identified by Glimmer3 with a raw
FT                   score of 14.37. Gene function extrapolated from
FT                   JJD26997_1659 (CP000768.1) after blastn alignment (97.45
FT                   percent identity over a 274 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31464.1"
FT                   /translation="MKLEKILQDLEQNHNLRTLTPLKHENKFVYKQNQKLLNLAGNDYL
FT                   YLASSKELKAEFLNTLKEQNLFFSSSSSRSLSGNFEIYEELESFLKTKFKDKEILHFNS
FT                   GYHLNISCIAALSSVSKTLFLADKLIHASMIDGLRLGGADFFRFHHKDMNHLESLIQKH
FT                   YENYENIIVLSEALFSMDGDFSDFKTLCELKRRYDKIKLYIDEAHSVGCFDEEGLGFVK
FT                   KLTLENEVDFLVFTFGKALASMGACMICDEKYKKFFINKARAFIYSTALPPINVAWTQF
FT                   IFKKMPYFKKEREKLELLSTFFKSKLQEKNHTVLGDAYIICLLLGENKKALEISQKLQK
FT                   AGFFAPAIKEPTVPKNKARIRFSLHAGLNTEELERIIELL"
FT   gene            313755..315038
FT                   /locus_tag="C1336_000060043"
FT                   /note="C1336_000060043 identified by Glimmer3 with a raw
FT                   score of 13.92."
FT   CDS             313755..315038
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060043"
FT                   /product="adenosylmethionine--8-amino-7-oxononanoate
FT                   aminotransferase"
FT                   /note="C1336_000060043 identified by Glimmer3 with a raw
FT                   score of 13.92. Gene function extrapolated from
FT                   JJD26997_1657 (CP000768.1) after blastn alignment (93.62
FT                   percent identity over a 1285 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31465.1"
FT                   /translation="MQNQILKNLDLKHIWHPCTQMKDHETLPLIPIKKAKGVWLYDFDD
FT                   KAYMDCVSSWWVNLFGHCNEKIANAIKKQVDELEHVILAGFTHEPIIKLSARLCEKVGR
FT                   NFNKCFYADNGSSAIEVALKMSFHYHLNKGLKKNKFLSLNNSYHGETLGALSVGDVALY
FT                   KDTYKALLLECLSTPVPQGKDYTKELEILKDILEKHSSEICAFILEPLVQCAGNMHMYE
FT                   AGFIDEAIKLCHAFNVQVIFDEIAVGFGRTGTLFALHQCKQSPDFICLSKGITGGFIPL
FT                   SVVLTRDEIYNAFYDTYESQKAFLHSHSYTGNTLACAAANAVLDIFENENILEKNQILS
FT                   AFIQQEFSKLKKFDFLGNFRTCGMISAFDILSHKHERVGLFVFQKALEKGLLLRPLANT
FT                   IYFMPPYIITKEQIVYVVESLEQIFKEF"
FT   gene            complement(315025..315630)
FT                   /locus_tag="C1336_000060044"
FT                   /note="C1336_000060044 identified by Glimmer3 with a raw
FT                   score of 15.67."
FT   CDS             complement(315025..315630)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060044"
FT                   /product="dethiobiotin synthetase"
FT                   /note="C1336_000060044 identified by Glimmer3 with a raw
FT                   score of 15.67. Gene function extrapolated from C8J_0285
FT                   (CP000814.1) after blastn alignment (97.36 percent identity
FT                   over a 606 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31466.1"
FT                   /translation="MQIYVSGIHTDVGKTHFSAAFCANFNYDYFKLIQAGTPTDSEFIA
FT                   KFSPKTKIFKEGIFLQTPASPHLGKIKEKLDYKALDIILPKSKSLLIELAGGLFSPMDE
FT                   NYTMIDFMNIFKHPTILVAKYYLGSINHILLSIEALKQRNINLLALVMMGKKDILQDEF
FT                   IKNYAKIPIINLDFFDENSILNKDFKEQMQEILQLKIP"
FT   gene            complement(315640..315954)
FT                   /locus_tag="C1336_000060045"
FT                   /note="C1336_000060045 identified by Glimmer3 with a raw
FT                   score of 17.10."
FT   CDS             complement(315640..315954)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060045"
FT                   /product="multidrug resistance protein, SMR family"
FT                   /note="C1336_000060045 identified by Glimmer3 with a raw
FT                   score of 17.10. Gene function extrapolated from C8J_0286
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 85 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31467.1"
FT                   /translation="MEWFYLFLATACEIFGVVIMKELVSTKNKLYLLALIVCFGFSFTF
FT                   LSLSMQNIAMSVAYAIWTGAGTAGGVMIGVLFYKESKSFLKLFLIAVIIACTVGLKFLS
FT                   "
FT   gene            complement(315957..316295)
FT                   /locus_tag="C1336_000060046"
FT                   /note="C1336_000060046 identified by Glimmer3 with a raw
FT                   score of 13.74."
FT   CDS             complement(315957..316295)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060046"
FT                   /product="multidrug resistance protein, SMR family"
FT                   /note="C1336_000060046 identified by Glimmer3 with a raw
FT                   score of 13.74. Gene function extrapolated from CJE0355
FT                   (CP000025.1) after blastn alignment (97.35 percent identity
FT                   over a 339 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31468.1"
FT                   /translation="MNEKFNINIAWFLIILGGIIECFWVSGLKYSTEIWHYILTAIGIC
FT                   ISFTCFLKACERLEVSITYSVFVGIGTIGVVLNEMFIFNEAVSVIKLVLIAILLLSIIA
FT                   LKWVSKEA"
FT   gene            316427..316963
FT                   /locus_tag="C1336_000060047"
FT                   /note="C1336_000060047 identified by Glimmer3 with a raw
FT                   score of 15.61."
FT   CDS             316427..316963
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060047"
FT                   /product="ribosomal protein L25"
FT                   /note="C1336_000060047 identified by Glimmer3 with a raw
FT                   score of 15.61. Gene function extrapolated from CJE0356
FT                   (CP000025.1) after blastn alignment (99.07 percent identity
FT                   over a 537 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31469.1"
FT                   /translation="MLEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFKVNEF
FT                   IKEVRKKTTLIFDVKVGSKTLSVVVVDYQKDPVTAELKHVDLKVAQKGVISKYMVPVKI
FT                   TGTAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDIVVPAGVTM
FT                   IDADRVAVVGVEKAR"
FT   gene            316960..317505
FT                   /locus_tag="C1336_000060048"
FT                   /note="C1336_000060048 identified by Glimmer3 with a raw
FT                   score of 12.05."
FT   CDS             316960..317505
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060048"
FT                   /product="peptidyl-tRNA hydrolase"
FT                   /note="C1336_000060048 identified by Glimmer3 with a raw
FT                   score of 12.05. Gene function extrapolated from CJE0357
FT                   (CP000025.1) after blastn alignment (98.90 percent identity
FT                   over a 546 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31470.1"
FT                   /translation="MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFKG
FT                   ELFKIGSSLLLLKPSTYMNNSGLSVKAVNDFYKCERMIVIHDDIDINLGSLRFKKGGSS
FT                   GGHNGLKSIDTLCGNDYERVRIGVGKGENVISHVLGKFKPEEEITLSKVLEHTKKALLE
FT                   LIENDDLSAISSKYSLKA"
FT   gene            317507..318565
FT                   /locus_tag="C1336_000060049"
FT                   /note="C1336_000060049 identified by Glimmer3 with a raw
FT                   score of 10.29."
FT   CDS             317507..318565
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060049"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000060049 identified by Glimmer3 with a raw
FT                   score of 10.29. Gene function extrapolated from C8J_0290
FT                   (CP000814.1) after blastn alignment (98.87 percent identity
FT                   over a 441 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31471.1"
FT                   /translation="MWIFFRFISGIYLKNFFIIFFSLLGFYCGIDLLLNFKDLPKAANL
FT                   DLLYVMFLSFSAVPYVLPISLIFALVVSLISMIRANEFVSLYALGLSRNYVILFPFLWA
FT                   LFFCCVYIGLNFTSFAYANDYKRNILKNGTIMNQSGEVFLKFNNNFVYISKINNGQNSA
FT                   QNIKIFNINDLNLSSFVSAKNAHFEGESWILRDGNITLLPKNYELANDGLKIQDFSELK
FT                   SLEGFKPKIIEGVASNSDYSISDALESFELFKAQNVNTDALKINLYKFVFTPFFAPFLM
FT                   LIMYYFFPVIARFFNLAIVTFIAFVVTLMIWGILFLLTRLSENSVIASEIGIVVPIIIL
FT                   GCLSAYMYYKHR"
FT   gene            318609..319817
FT                   /locus_tag="C1336_000060050"
FT                   /note="C1336_000060050 identified by Glimmer3 with a raw
FT                   score of 15.93."
FT   CDS             318609..319817
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060050"
FT                   /product="diaminopimelate decarboxylase"
FT                   /note="C1336_000060050 identified by Glimmer3 with a raw
FT                   score of 15.93. Gene function extrapolated from C8J_0291
FT                   (CP000814.1) after blastn alignment (97.93 percent identity
FT                   over a 1209 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31472.1"
FT                   /translation="MDYKQLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVK
FT                   ANSNLSLLQMFANLDSGFDCVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDI
FT                   LYINLESEAEMMLLESVAKELNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEIDTA
FT                   RKMYLYAKNSSFLEPVGVHFHIGSQLLDISPIHEAAGIVAKLVRELKALQIDLKFFDIG
FT                   GGLGVAYEKDECEVDLYSYAQGVLAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQN
FT                   KTKRFVVVDGAMNDLIRPSLYEAYHEIILPYNQAQESLCDVVGGICESGDFFAKARSLP
FT                   STQSGDIMVIKNTGAYGFSMSSNYNTRNKVCELALEEGQVRLIRQRENFEDQIALEEKF
FT                   LKA"
FT   gene            319819..320580
FT                   /locus_tag="C1336_000060051"
FT                   /note="C1336_000060051 identified by Glimmer3 with a raw
FT                   score of 15.86."
FT   CDS             319819..320580
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060051"
FT                   /product="HAD-superfamily hydrolase, subfamily IIA"
FT                   /note="C1336_000060051 identified by Glimmer3 with a raw
FT                   score of 15.86. Gene function extrapolated from CJE0360
FT                   (CP000025.1) after blastn alignment (98.13 percent identity
FT                   over a 748 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31473.1"
FT                   /translation="MFFLDVQGTLISDHDKSLIHGAKELIDFLNAKNLPYVIITNNTKK
FT                   LDFLEKLQQKGLAIKENAYIDPFSVLKHLLKPCKVAAFGADEFVKSLENLGFELDFVNP
FT                   SAVLVASYDDFKFVDFASMIEFARREVRFIAMHETSIYKKDGRPYPGVGSIMAMLKNAI
FT                   DFKYEVVGKPSIAFYKEALNLIRRQNSKIDFEDIKIISDDFRGDLLKAKELGMKTLLVL
FT                   SGKISDTKGLDTDLLDGVYPSVFEFLKELKC"
FT   gene            320574..321647
FT                   /locus_tag="C1336_000060052"
FT                   /note="C1336_000060052 identified by Glimmer3 with a raw
FT                   score of 13.88."
FT   CDS             320574..321647
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060052"
FT                   /product="chorismate mutase/prephenate dehydratase"
FT                   /note="C1336_000060052 identified by Glimmer3 with a raw
FT                   score of 13.88. Gene function extrapolated from CJE0361
FT                   (CP000025.1) after blastn alignment (98.04 percent identity
FT                   over a 1074 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31474.1"
FT                   /translation="MLNLEEFRNKIDAVDDKILELLNERMTYVKSIGELKQSSGGSIYR
FT                   PERERAIINRLKNANLGVLDQNAIEAIYQEIFAVSRNLEMPQTIAYLGPEGTYTHQAAR
FT                   SRFGAMSRYIALANIEDVFKELSNKEAKYGVVPIENNTEGAVGITLDCLGRYNELKIFG
FT                   EIYMDIHHSFVGINENLKEIKRIYSHPQGYNQCRKFLESHELSAIEFVPSKSTANAAYL
FT                   ASQDKYAAAICSKIAAKLYNVPVLFDKIEDNAANKTRFLILSDIKNPKMPNCKTSILAH
FT                   TAHKPGGLSFLLEQFKKENINLTKLESRPVKSKEFLHSFYIDFEGHIDDENVKKALKDI
FT                   QEIVWLGSYLSGEKDEI"
FT   gene            321637..322731
FT                   /locus_tag="C1336_000060053"
FT                   /note="C1336_000060053 identified by Glimmer3 with a raw
FT                   score of 10.96."
FT   CDS             321637..322731
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060053"
FT                   /product="histidinol-phosphate aminotransferase"
FT                   /note="C1336_000060053 identified by Glimmer3 with a raw
FT                   score of 10.96. Gene function extrapolated from CJE0362
FT                   (CP000025.1) after blastn alignment (99.32 percent identity
FT                   over a 148 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31475.1"
FT                   /translation="MKFNEFLNHLSNYEPGKDIEVIAKEYGVKEVIKLASNENPFGTPP
FT                   KAIECLRQNANKAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHAKLNS
FT                   KNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNN
FT                   PLGECLDASEVTKFIKGLEEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLG
FT                   TFSKLYGLGGLRIGYGIADASIISAFYKLRAPFNVSNLALKAAVAAMDDDEFTEKTLEN
FT                   NFSQMELYKEFAKKHNIKIIDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNLKSYGLN
FT                   AIRITIGTSYENERFFTEFDKILR"
FT   gene            322785..324467
FT                   /locus_tag="C1336_000060054"
FT                   /note="C1336_000060054 identified by Glimmer3 with a raw
FT                   score of 14.98."
FT   CDS             322785..324467
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060054"
FT                   /product="flagellar M-ring protein"
FT                   /note="C1336_000060054 identified by Glimmer3 with a raw
FT                   score of 14.98. Gene function extrapolated from C8J_0295
FT                   (CP000814.1) after blastn alignment (98.47 percent identity
FT                   over a 1244 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31476.1"
FT                   /translation="MDFKNMFHQIGQLYQNLTRKQRIVIAASIVVVVGFLVFLALFRGS
FT                   GSNANNGYAVLVENVSPSSSAAIVAKLEQNNIPYKLESENKILVPQDQVYRQRMFIASE
FT                   GLIKDSRVGFEAFDTQAFGATNEEQKVKYQRAIEGELARTIETLEPIRSAVVHIAFPKD
FT                   SVFTERQIPPTASVVVNVREGLKLTRKQIDGIKNIVSAAVPKLTKENVKISDQSGVPLD
FT                   EQEAYEDDLVRAQIKFKSDQEKALEDKIIENLAPFAGGMDKVKVSVNIDFDFSKQESQS
FT                   EIYDPNPIVRSEQTLNEERTGRKDPEIQGVPGAVSNIGPVEGLDNKGQIDTYKKNQVTT
FT                   NNELSKTITNTKKQFATVLRTSAAVTIDGKYQDVVDENGDVKSEYVPLTKEELASVESI
FT                   VKNTINFSATRGDSVVVQNLPFHRESIRVESKVKTFYNRFIEPFIPPVKYFIAAILLFI
FT                   FYKKVITPFTQKMLEDVAAQEEMQQGPNAVLDDVEDTLEKMNAARKKVEEQLGFGDNFN
FT                   EDSIQYEVLLEKLRGLVSDKSEEIAALLQNLIQNDSEFGEKDM"
FT   gene            324467..325495
FT                   /locus_tag="C1336_000060055"
FT                   /note="C1336_000060055 identified by Glimmer3 with a raw
FT                   score of 13.43."
FT   CDS             324467..325495
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060055"
FT                   /product="flagellar motor switch protein"
FT                   /note="C1336_000060055 identified by Glimmer3 with a raw
FT                   score of 13.43. Gene function extrapolated from C8J_0296
FT                   (CP000814.1) after blastn alignment (99.22 percent identity
FT                   over a 1029 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31477.1"
FT                   /translation="MIKLSEEQKMVYDDLSMPEKVAIFLIQLGEDATTSVFSHMEIDVI
FT                   TEISRYIAMAKNVDRSVATAVLEEFYTLLQSNQYIKSGGLEYAKEILFRTFGPEIANKI
FT                   LEKLTKSMENNQNFAYLAQIKPQQLADFITKEHPQTIALILAHMDSIHAAETLEYFSDE
FT                   LRAEVVIRMANLGDISPSIIKRVSAVLESKLESLTSYKVEVGGPRAVAEVLNRLGQKAS
FT                   KSTITYIEQSDERLAETIKELMFTFDDIQKLSTQAIREILKVADKRDLMIGLKGASEEL
FT                   KQKFLANMSTRASEAFLEEMGFLGAVRVKDVEDAQRKVVEVVQKLAEQGLVQTGDADEM
FT                   IE"
FT   gene            325503..326333
FT                   /locus_tag="C1336_000060056"
FT                   /note="C1336_000060056 identified by Glimmer3 with a raw
FT                   score of 14.40."
FT   CDS             325503..326333
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060056"
FT                   /product="flagellar assembly protein FliH, putative"
FT                   /note="C1336_000060056 identified by Glimmer3 with a raw
FT                   score of 14.40. Gene function extrapolated from
FT                   CJJ81176_0342 (CP000538.1) after blastn alignment (98.87
FT                   percent identity over a 354 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31478.1"
FT                   /translation="MVNRSNVISGGASDQHVVEGYRFKVISEFDNHTGEKKHTQTPDEE
FT                   NANISLNDEKSVEENHAIAPTQAVMETQIPTFQPSFVEDLLKKTDEMSSNIIKLQMQIE
FT                   SQENEFNNRLNSELENAKEKFAKEGYEKAKEEFQKELSDFKDKYLKSIAKLDNACENLE
FT                   NFIEKNEKELADTAIDIAKEVILKELELNSSKIAYALAKDLIGELKGASAIELKVNAED
FT                   YEYLKEQFDQNAHIKISLDDAISKGSVIIISDAGNIESNLNSRLTKIKKMVNNE"
FT   gene            326326..328173
FT                   /locus_tag="C1336_000060057"
FT                   /note="C1336_000060057 identified by Glimmer3 with a raw
FT                   score of 15.46."
FT   CDS             326326..328173
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060057"
FT                   /product="1-deoxyxylulose-5-phosphate synthase"
FT                   /note="C1336_000060057 identified by Glimmer3 with a raw
FT                   score of 15.46. Gene function extrapolated from C8J_0298
FT                   (CP000814.1) after blastn alignment (98.65 percent identity
FT                   over a 1848 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31479.1"
FT                   /translation="MSKKFAHTQEELEKLSLKELENLAASIREKIIQVVSKNGGHLSSN
FT                   LGAVELSIAMHLVFDAKKDPFIFDVSHQSYTHKLLSGKEEIFDTLRQINGLSGYTKPSE
FT                   GDYFVAGHSSTSISLAVGACKAIALKGEKRIPVALIGDGALSAGMAYEALNELGDSKFP
FT                   CVILLNDNEMSISKPIGAISKYLSQAMATQFYQSFKKRIAKMLDILPDSATYMAKRFEE
FT                   SFKLITPGLLFEELGLEYIGPIDGHNLGEIISALKQAKAMQKPCVIHAQTIKGKGYALA
FT                   EGKHAKWHGVGAFDIDSGESVKKSDTKKSATEIFSKNLLDLASKYENIVGVTAAMPSGT
FT                   GLDKLIEKYPNRFWDVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQVIHDCAI
FT                   MNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLLAPRDEQMMQNIMEYAYLHQ
FT                   GPIAFRYPRGSFILDKEFNPCEIKLGKAQWLVKNSSEIAFLGYGQGVAKAWQVLRALQE
FT                   MNNNANLIDLIFAKPLDEELLRELAKKSKIWFIFSENVKIGGIESLINNFLQKYDLHVK
FT                   VISFEYEDKFIEHGKTSEVEKNLEKDVNSLLTKVLKFYH"
FT   gene            328259..328669
FT                   /locus_tag="C1336_000060058"
FT                   /note="C1336_000060058 identified by Glimmer3 with a raw
FT                   score of 9.99."
FT   CDS             328259..328669
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060058"
FT                   /product="transcriptional regulator, Fur family"
FT                   /note="C1336_000060058 identified by Glimmer3 with a raw
FT                   score of 9.99. Gene function extrapolated from
FT                   CJJ81176_0344 (CP000538.1) after blastn alignment (98.78
FT                   percent identity over a 411 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31480.1"
FT                   /translation="MELLQMLKKHELKATPQRLCVLKILKRHEHPNIDELYAEIKKEYP
FT                   SISLATVYKNLNTLQEQGLVVEINVLNQKTCYDIYEEEHIHVVCAKCGGIEDLSFKDAK
FT                   LYEYQEHLEKKIGNLVNHLSVCAYVDSCKKCH"
FT   gene            328715..329911
FT                   /locus_tag="C1336_000060059"
FT                   /note="C1336_000060059 identified by Glimmer3 with a raw
FT                   score of 9.40."
FT   CDS             328715..329911
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060059"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060059 identified by Glimmer3 with a raw
FT                   score of 9.40. Gene function extrapolated from Cj0323
FT                   (AL111168.1) after blastn alignment (99.25 percent identity
FT                   over a 133 bp alignment). Similar to Cj0323."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31481.1"
FT                   /translation="MVYEIQKNFLLSDCTLLENLKKDNIPFRNSKFETFYTQITSNHSV
FT                   KFQSFCNEFYKITKFNNSILEQNQEEKISKKKFEKARKKIIGKSIKKERFEFKLCSLKS
FT                   YIDIYEEPKICILKIFFPTLDSSNEFKIPKDFKIQKELHHDLNSKHIVLYGFEYQKFDI
FT                   EKCFKIIEKNQNFSLDFPNYINAYDGFRIFLFYLFKKLKFYWTLSLERKDKQSLCEFLF
FT                   YSRSLYIVLSSMSTILDKNLSNILALKFKDITKKTQDILASENSNQDLLLFLSDEKIQD
FT                   LFNDFDFFIKENSFYEGDCKDRFFKQLVALELRKKIILFRKNILKNFDLELFENSFFEL
FT                   AIFLEYFYRFLEIKNLNKLYEKYCKDRDKNIFSKIINNKNKFCKLLKKSSKNLKIYKG"
FT   gene            329914..330621
FT                   /locus_tag="C1336_000060060"
FT                   /note="C1336_000060060 identified by Glimmer3 with a raw
FT                   score of 17.14."
FT   CDS             329914..330621
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060060"
FT                   /product="ubiquinone/menaquinone biosynthesis
FT                   methyltransferase"
FT                   /note="C1336_000060060 identified by Glimmer3 with a raw
FT                   score of 17.14. Gene function extrapolated from
FT                   CJJ81176_0346 (CP000538.1) after blastn alignment (99.28
FT                   percent identity over a 695 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31482.1"
FT                   /translation="MQKQEKIIEMFNQIAPTYDKANRILSFGADVAWRKKACQRVMSLY
FT                   LKKDLKIADIACGTGDMIEIWQESALKMEKNILNIKGIDPSSGMLNVAKEKFPNVEFIE
FT                   AGAQNLSLESQSLDILSISYGIRNVVERQKALSEFARVLQKDGILVVLEFTKREKGGFI
FT                   AACRDFYLKNILPSIGGIISKNKSAYEYLPNSIEGFLSKEEFILELKNAGFEMLDYKSF
FT                   SFGVSSMFIAKKL"
FT   gene            330618..331781
FT                   /locus_tag="C1336_000060061"
FT                   /note="C1336_000060061 identified by Glimmer3 with a raw
FT                   score of 15.24."
FT   CDS             330618..331781
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060061"
FT                   /product="exodeoxyribonuclease VII large subunit"
FT                   /note="C1336_000060061 identified by Glimmer3 with a raw
FT                   score of 15.24. Gene function extrapolated from Cj0325
FT                   (AL111168.1) after blastn alignment (99.51 percent identity
FT                   over a 203 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31483.1"
FT                   /translation="MTPTELNLKAKALLETHFDNIVLSGEISKITLHGSGHWYFDLKDE
FT                   RSSIACAMFKGANLKVGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQ
FT                   FLALKERLQKEGLFDSRFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYI
FT                   FDALTQGNNASFSLIQALKKADDMDLDVLIIARGGGSREDLFCFNDENLAREIFKAKTP
FT                   IISAIGHEIDYVISDFVADFRAPTPSAAIDALFYSKLDIEQSLDLMEEKLMQLWNHKIQ
FT                   NYENLLLNLSKFFKFNSLPKIIDEKIKQSYNIEKQLNHLLANQMRYNELKLDKLQNAYL
FT                   QHENFFNKSKKFICIRKNGKIVNLEDLKSDDIVILSSQTSQKEAKIL"
FT   gene            331791..332867
FT                   /locus_tag="C1336_000060062"
FT                   /note="C1336_000060062 identified by Glimmer3 with a raw
FT                   score of 13.59."
FT   CDS             331791..332867
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060062"
FT                   /product="phosphoserine aminotransferase"
FT                   /note="C1336_000060062 identified by Glimmer3 with a raw
FT                   score of 13.59. Gene function extrapolated from Cj0326
FT                   (AL111168.1) after blastn alignment (98.14 percent identity
FT                   over a 1077 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31484.1"
FT                   /translation="MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVF
FT                   EEVHFGAQEKAKKLYGLNDDYEVLFLQGGASLQFAMIPMNLALNGVCEYANTGVWTKKA
FT                   IKEAQILGVNVKTVASSEESNFDHIPSVEFSDNADYAYICSNNTIYGTQYQNYPKTKAP
FT                   LIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNY
FT                   LTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVYEKNSQKATMLYECIDLSNGFY
FT                   KGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASIYNALNL
FT                   DQVKTLCEFMKEFQGKYT"
FT   gene            332864..333214
FT                   /locus_tag="C1336_000060063"
FT                   /note="C1336_000060063 identified by Glimmer3 with a raw
FT                   score of 17.86."
FT   CDS             332864..333214
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060063"
FT                   /product="endoribonuclease L-PSP family protein"
FT                   /note="C1336_000060063 identified by Glimmer3 with a raw
FT                   score of 17.86. Gene function extrapolated from
FT                   CJJ81176_0349 (CP000538.1) after blastn alignment (97.72
FT                   percent identity over a 351 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31485.1"
FT                   /translation="MIKRFDECDRMSQIIVFDKYFKTAGQVAFEPSGDIKKQTKEALAE
FT                   LDALFEKIGASKGDLIQIQIWLANMKDFDAMNEIYDAWIKNYPKPVRACVGSALAEGYL
FT                   VEIQAFGKLREN"
FT   gene            complement(333211..334185)
FT                   /locus_tag="C1336_000060064"
FT                   /note="C1336_000060064 identified by Glimmer3 with a raw
FT                   score of 13.64."
FT   CDS             complement(333211..334185)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060064"
FT                   /product="3-oxoacyl-(acyl-carrier-protein) synthase III"
FT                   /note="C1336_000060064 identified by Glimmer3 with a raw
FT                   score of 13.64. Gene function extrapolated from CJE0373
FT                   (CP000025.1) after blastn alignment (97.74 percent identity
FT                   over a 975 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31486.1"
FT                   /translation="MLKASLKSIASYIPEKILSNADLEKMVDTTDEWITRRTGIKERRI
FT                   ANENENTSDLGTKAALKAIERANLKPEDIDAILVATLSPDYFTMPSTACKIASNLGLVN
FT                   ISAFDISAACSGFIYLLEQAKALVESGLKKNVLIIGAEKTSSIMDYNDRSICILFGDGA
FT                   GAGVVSLDNENHILDVHTASNGNYGDLLMTQRSQKSSLCQTLSMQMRGNEVFKIAVNTL
FT                   SNDVVEILAKNNILAQEIDLFIPHQANLRIIKAVQEKLNLSDEKCVITVQKYGNTSAAS
FT                   IPMAMNDAYEEGRLKKGSLILLDAFGGGFTWGSALLKFGGENF"
FT   gene            complement(334178..335164)
FT                   /locus_tag="C1336_000060065"
FT                   /note="C1336_000060065 identified by Glimmer3 with a raw
FT                   score of 13.81."
FT   CDS             complement(334178..335164)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060065"
FT                   /product="fatty acid/phospholipid synthesis protein PlsX"
FT                   /note="C1336_000060065 identified by Glimmer3 with a raw
FT                   score of 13.81. Gene function extrapolated from
FT                   CJJ81176_0351 (CP000538.1) after blastn alignment (98.99
FT                   percent identity over a 792 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31487.1"
FT                   /translation="MINIAIDAMGGDFGEKPIIEGVLKALEAKPFNAILVGNSKILKPL
FT                   IPKKLEQYIQYEEASEIFSMNENATDALKNKETTIYKAINLLKEKKVDAVVSAGHSGAS
FT                   MSLATLRLGRLKGISRPAIATLMPNIVNKTLLLDVGANTDCKAENLFQFAIMGEVYARA
FT                   IMQIQKPRLALLSNGEEECKGNELTKESHQLMKKIPNFIGNAEGRDIFNGEIDVLICDG
FT                   FDGNVILKACEGVATAIFQLLKNEVKQSFISKIGALLMRPSFKKLKKHIDWQEYGGAPL
FT                   LGVNGCVIISHGKSDSRAIKNAIFQAINFSQSHINELIENELGKYNA"
FT   gene            complement(335170..335316)
FT                   /locus_tag="C1336_000060066"
FT                   /note="C1336_000060066 identified by Glimmer3 with a raw
FT                   score of 7.54."
FT   CDS             complement(335170..335316)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060066"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060066 identified by Glimmer3 with a raw
FT                   score of 7.54. Gene function extrapolated from C8J_0307
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 147 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31488.1"
FT                   /translation="MAVPKRRVSKTRAAKRRTHYKVSLPMPIKDKDGSYKMPHRANPTT
FT                   KEY"
FT   gene            complement(335340..335693)
FT                   /locus_tag="C1336_000060067"
FT                   /note="C1336_000060067 identified by Glimmer3 with a raw
FT                   score of 12.80."
FT   CDS             complement(335340..335693)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060067"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060067 identified by Glimmer3 with a raw
FT                   score of 12.80. Gene function extrapolated from C8J_0308
FT                   (CP000814.1) after blastn alignment (99.44 percent identity
FT                   over a 354 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31489.1"
FT                   /translation="MKIPFSKINTKEYPFKLNLENMIFEGNLVKINPKLVKINAIMQGF
FT                   IYRPCDSCGTELELEIKENLELFASDGIFKDEANELSNTIEFFDGHIDLIEVAISELEA
FT                   YLSDYFYCINCNN"
FT   gene            complement(335694..336107)
FT                   /locus_tag="C1336_000060068"
FT                   /note="C1336_000060068 identified by Glimmer3 with a raw
FT                   score of 15.64."
FT   CDS             complement(335694..336107)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060068"
FT                   /product="nucleoside diphosphate kinase"
FT                   /note="C1336_000060068 identified by Glimmer3 with a raw
FT                   score of 15.64. Gene function extrapolated from C8J_0309
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 414 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31490.1"
FT                   /translation="MEKTLSIIKPDAVKKGVIGKILDRFESNGLRIAAMKKVQLSKEQA
FT                   ENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIRAD
FT                   FAESIDANAVHGSDSLENAKIEIDFFFKPNEIC"
FT   gene            complement(336220..336504)
FT                   /locus_tag="C1336_000060069"
FT                   /note="C1336_000060069 identified by Glimmer3 with a raw
FT                   score of 9.37."
FT   CDS             complement(336220..336504)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060069"
FT                   /product="ferredoxin, 4Fe-4S"
FT                   /note="C1336_000060069 identified by Glimmer3 with a raw
FT                   score of 9.37. Gene function extrapolated from
FT                   CJJ81176_0355 (CP000538.1) after blastn alignment (99.30
FT                   percent identity over a 285 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31491.1"
FT                   /translation="MAVKITDICIACGSCIDECPVSAIVDDANNPEGEDRYYVYANKCV
FT                   ECVGHNDQPACASACPTDGCIVWSAVESGQPSRDNIGADMRSGDTPVFA"
FT   gene            336710..337306
FT                   /locus_tag="C1336_000060070"
FT                   /note="C1336_000060070 identified by Glimmer3 with a raw
FT                   score of 12.93."
FT   CDS             336710..337306
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060070"
FT                   /product="alkyl hydroperoxide reductase"
FT                   /note="C1336_000060070 identified by Glimmer3 with a raw
FT                   score of 12.93. Gene function extrapolated from C8J_0311
FT                   (CP000814.1) after blastn alignment (99.83 percent identity
FT                   over a 597 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31492.1"
FT                   /translation="MIVTKKALDFTAPAVLGNNEIVQDFNLYKNIGPKGAVVFFYPKDF
FT                   TFVCPSEIIAFDKRYQEFKNRGIEVIGISGDNEFSHFAWKNTPVNQGGIGQVKFPLVAD
FT                   LTKQIARNFDVLYAEAVALRGSFLLDADGTVRHAVVNDLPLGRNIDEMLRMVDTMLFTN
FT                   EHGEVCPAGWNKGDEGMKANPKGVAEYLGKNEAKL"
FT   gene            337425..338513
FT                   /locus_tag="C1336_000060071"
FT                   /note="C1336_000060071 identified by Glimmer3 with a raw
FT                   score of 13.32."
FT   CDS             337425..338513
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060071"
FT                   /product="flagellar biosynthetic protein"
FT                   /note="C1336_000060071 identified by Glimmer3 with a raw
FT                   score of 13.32. Gene function extrapolated from C8J_0312
FT                   (CP000814.1) after blastn alignment (99.74 percent identity
FT                   over a 385 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31493.1"
FT                   /translation="MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTIT
FT                   LLMMSFMGERIVNLYRYYQSFIGVEFDLRIIQAIMIKSIFEVLIILAPIVLSIMIAGVL
FT                   GNIMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFIVLL
FT                   KFMQELPRVELYTMVAQLTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGLRMSK
FT                   QEIKDEYKQMEGDPQVKGRIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIRYDTSK
FT                   EQAPRVVAKGVDFLALRIKQVAYENNVVVYENPPLARELYKACDVNDLIPREMFKAVAE
FT                   VLGFVYNTNNKSRLAGQVKKGN"
FT   gene            complement(338519..339262)
FT                   /locus_tag="C1336_000060072"
FT                   /note="C1336_000060072 identified by Glimmer3 with a raw
FT                   score of 10.60."
FT   CDS             complement(338519..339262)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060072"
FT                   /product="chemotaxis protein MotB, putative"
FT                   /note="C1336_000060072 identified by Glimmer3 with a raw
FT                   score of 10.60. Gene function extrapolated from C8J_0313
FT                   (CP000814.1) after blastn alignment (96.77 percent identity
FT                   over a 744 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31494.1"
FT                   /translation="MAKKHKCPECPAGEKWAVPYADFLSLLLALFIALWAISKTNPAKV
FT                   EALKTEFVKIFDYTSTQTVKEESKTQEKYKGAAKEESDELKSLKQMTMTQQETIKRLQA
FT                   ALDQSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDN
FT                   SDSIIRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPINGNPQALENNRVEIYF
FT                   KVDTADTSTQKSVLELINKIGTKTP"
FT   gene            complement(339265..340041)
FT                   /locus_tag="C1336_000060073"
FT                   /note="C1336_000060073 identified by Glimmer3 with a raw
FT                   score of 13.56."
FT   CDS             complement(339265..340041)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060073"
FT                   /product="putative flagellar motor proton channel"
FT                   /note="C1336_000060073 identified by Glimmer3 with a raw
FT                   score of 13.56. Gene function extrapolated from C8J_0314
FT                   (CP000814.1) after blastn alignment (98.07 percent identity
FT                   over a 777 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31495.1"
FT                   /translation="MDLSTILGMVLAVTSISVGDILEGGNPLHVVHLSSFLIVMPTAAF
FT                   CAMTSTHKKIVKAAYKELKVVFKGSGVNLPERIAQLIEFAIIARRDGLLALESRTNEIE
FT                   NEFLKNAMMMLVDGKSFEEIHESMEIQTEQLEEHYKECAEYWIVFGETCPTMGLVGAVF
FT                   GLILALKLLDNPQAMAAGISGAFTATVTGIFGAYALFAPWGRKMKANGMDLVKEQIVIT
FT                   EAIKGIAEGANPRDLEAKLFNFLSHDDPKISQFDKG"
FT   gene            complement(340057..342696)
FT                   /locus_tag="C1336_000060074"
FT                   /note="C1336_000060074 identified by Glimmer3 with a raw
FT                   score of 14.58."
FT   CDS             complement(340057..342696)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060074"
FT                   /product="DNA polymerase type I"
FT                   /note="C1336_000060074 identified by Glimmer3 with a raw
FT                   score of 14.58. Gene function extrapolated from C8J_0315
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 101 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31496.1"
FT                   /translation="MKTLTIIDTFGFFFRLYYALKGFKNSQGQASGMISGFANFIYSLK
FT                   NEHKSDYIVFALDSKGKTFRSEIDPNYKQNRTPPPPELLEQIPICIEMIEKMGFISVSR
FT                   EGYEADDIIASFVRTCEDRDIFVRIITQDKDLYQLIKDGKTSIYSPISKNDYDEAACLE
FT                   KYGVKPHQIRDFLALCGDSSDNIPGVKGIGAKGAKTLLDEFGSIEGIYENLTLVRNERS
FT                   RNLLLEGKENAFLSKKLASLYENLEVQDLIEKATYPDEEPLLKILEILEHYELNTLLKK
FT                   LRQNPDNKDKNLGFKATLIQDENKLFEILNTLDKESIIAFDTETTGLDTKEAKIVGFSF
FT                   CMSENEAFYVPLTHNYLGVGEQISLQSAKKAIELIFNHFVIGHNLKYDFKIIQNNFGLN
FT                   LPQKYADTMILAWLKNPSLRVNMDDLALRLFNYETLHFESLVKKGENFASVELEKACKY
FT                   AAEDAYITLRFYLYFLKNLEAPLLELAKNCEFDFIRIIMMMEENGIKLDTNALEALMKK
FT                   FENEIKNLSEEIYTLCEDRFNLNSPKQVGDILFEKLKLPSGKKGKTGYSTDEKVLNALL
FT                   DKHPIIPKILDYRELAKLYSTYCEPLLKLALKDKNSRIYSSFLQTGTATGRLSSKDPNL
FT                   QNIPAHGQYAKDYKSCFVAKDGFSFISLDYSQIELRMLAHFSEDEKLLNAFANDEDIHA
FT                   RTAIMIFGESNYETRSVAKSINFGLIYGMGYKTLSQNLKIEAHLAKSYIEKYFENFTSI
FT                   KKYFETVKNEAKQNGFITTLNSRKRYFDFENAKPMQIAMYERESINSILQGSAADVIKL
FT                   AMLEIDKELNEDKKLILQIHDELIFEVKDDLCENFVKKTRDIMENIVKLKVKLKTSSSI
FT                   AKNWGDLK"
FT   gene            342857..344218
FT                   /locus_tag="C1336_000060075"
FT                   /note="C1336_000060075 identified by Glimmer3 with a raw
FT                   score of 13.87."
FT   CDS             342857..344218
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060075"
FT                   /product="major facilitator family transporter"
FT                   /note="C1336_000060075 identified by Glimmer3 with a raw
FT                   score of 13.87. Gene function extrapolated from C8J_0316
FT                   (CP000814.1) after blastn alignment (98.79 percent identity
FT                   over a 331 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31497.1"
FT                   /translation="MTNQQIDGIADKNFNTPEGRKVFKKAVFSCWLGTAMEYADFALYG
FT                   LAAATIFSEVFFPEQTPVIALLLSFVTYGIGFIARPIGALFFGYLGDKHGRKNVMMATI
FT                   ALMGISTTLIGFIPSYAVIGVWAPICLVALRFMQGFGAGAELSGGTVMLGEYAPSKRRG
FT                   LVSSVIALGSNSGTLLASFVWLLMVQMDEASFKEWGWRVPFMGSILIALFAVYIRFHVK
FT                   ETPVFEKQKNEMMKLRLNNEKHMKKDERSFWQRSRAFWTMVGLRIGENGPSYLAQGFIV
FT                   GYVTKILLLDKSVATTAVMIASLVGFLVIPLAGYLSDRFGRRITYRMFCLLLMIYAFPA
FT                   FMLLDSKNEIIVILTIIVGMSLASLGIFGVQAAWGVELFGVKNRYTKMAFAKELGSILS
FT                   GGTAPMVASALLAYYGTWWPIATYFVLTAGIGFVTTFFAPETRGRDLNKIEDAI"
FT   gene            344215..345222
FT                   /locus_tag="C1336_000060076"
FT                   /note="C1336_000060076 identified by Glimmer3 with a raw
FT                   score of 11.23."
FT   CDS             344215..345222
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060076"
FT                   /product="inosine-uridine preferring nucleoside hydrolase
FT                   family protein"
FT                   /note="C1336_000060076 identified by Glimmer3 with a raw
FT                   score of 11.23. Gene function extrapolated from C8J_0317
FT                   (CP000814.1) after blastn alignment (97.20 percent identity
FT                   over a 893 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31498.1"
FT                   /translation="MRLILDTDIGNAIAGANTDDGLALALILASKEIKLEMLSTICGNV
FT                   PSLVAYSVAKDLFKRLNLNIPVYLGANEALKEPSKAWRQRLDESVKNFKLEYLWENIKS
FT                   PEILENINPDAIFKMGELVGKNPKEISICAIGPLTNIAMAMKIFKDFDINLKELFIMGG
FT                   SFDMPYYTKDTNFGFDPEAASIVLNSRAKITLVPYNVTMQTLLTHEDLKELQAKNILCD
FT                   FIVKTLGVWIDYASKTRGTKGTWIHDALTIAYALDSSIADFDECYADVICDSSLARGMS
FT                   WRCFKEPKMSMGMDLSTKNCVKILKNVDNAKLLKLIKERLLKGVCYENYESITT"
FT   gene            complement(345178..345621)
FT                   /locus_tag="C1336_000060077"
FT                   /note="C1336_000060077 identified by Glimmer3 with a raw
FT                   score of 9.78."
FT   CDS             complement(345178..345621)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060077"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000060077 identified by Glimmer3 with a raw
FT                   score of 9.78. Gene function extrapolated from C8J_0318
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 208 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31499.1"
FT                   /translation="MFDFLYNDISYLGLFIVCFLSSTLLPLASEAFVLGFIKLDFNPNL
FT                   VLIVATLGNTLGSLSTYGLAYLGKQKILEKYFSKSLKKLENFNANFAKFGSIFAFLSFL
FT                   PLVGDLFALGLGFAKYSFLKTIFFILLGKLSRYAFIIFIANSF"
FT   gene            complement(345626..348451)
FT                   /locus_tag="C1336_000060078"
FT                   /note="C1336_000060078 identified by Glimmer3 with a raw
FT                   score of 14.21."
FT   CDS             complement(345626..348451)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060078"
FT                   /product="excinuclease ABC subunit A"
FT                   /note="C1336_000060078 identified by Glimmer3 with a raw
FT                   score of 14.21. Gene function extrapolated from C8J_0319
FT                   (CP000814.1) after blastn alignment (98.58 percent identity
FT                   over a 1971 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31500.1"
FT                   /translation="MNDTIKIIGARENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFGT
FT                   LYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITE
FT                   IYDYLRLLYARVGIQHCHQCGQKISSMSASDIVSEILKFPKGAKIIIYAPLIREKKGTY
FT                   ADLLENLRNKGYVRAQIDGVLVRLDEEIELAKTKKHTIKLVIDRLEIQEDLLSRLASDI
FT                   EKGLQESFGEIEIEVLNHEEINLNKHYHFSEHSACFDCKISFVPLEPLSFSFNSPKGAC
FT                   EACDGLGIRYTLDMKKIIDENLSLENGAVKIMYGFNKSYYYKFLIAFCEQNEIPIKIPF
FT                   MQLSEEQKRLVLYGNAKTIEFLWKRNRLKRTFEGVVKMAYEMLKDEKDLAEYMSEKICK
FT                   DCGGHRLKPESLAVKVAKKGLGEILDMSIEDSTAFFADEKNFSYLSEQQKLISKPILKE
FT                   INERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYVLDEPSIGLHE
FT                   RDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKAGKFGGEVVFSGTYKEL
FT                   LKSKSETALYMNGKKQISQLQNRAQKEWLELKNVNINNIQDLSVKFPLQNLVAITGVSG
FT                   SGKSSLILQTLLPFAQEELNRAKKVKKLGGVQIEGLEKLDKVIYLDQSPIGRTPRSNPA
FT                   TYTGAMDEIRNLFAATKEAKMRGYKAGRFSFNVKGGRCEKCSGDGEIKIEMHFLPDVMV
FT                   VCDTCGGKRYNDATLEIKYKGKNISEILNMSVLEASEFFTAVPKIKQKLDTLVKVGLDY
FT                   LTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLHFEDVNKLILVLQHLV
FT                   DLKNSVFVIEHNLDVIKNADYIIDMGPEGGVKGGKVISTGSVEKVAKEHKKTRSYTGYY
FT                   LDLELKNTQKS"
FT   gene            complement(348524..349309)
FT                   /locus_tag="C1336_000060079"
FT                   /note="C1336_000060079 identified by Glimmer3 with a raw
FT                   score of 12.54."
FT   CDS             complement(348524..349309)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060079"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060079 identified by Glimmer3 with a raw
FT                   score of 12.54. Gene function extrapolated from
FT                   CJJ81176_0367 (CP000538.1) after blastn alignment (98.73
FT                   percent identity over a 786 bp alignment) - for clarity,
FT                   the original product name 'membrane protein, putative' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31501.1"
FT                   /translation="MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHAI
FT                   GISVLQMIFAAVFGSYINYKKKNLNLKDGVMIGFGGLIGASFSGMLLKALSDVALTSVF
FT                   LAASCIFFIKYAFGIKENIMQIQRSVWVKNIILFIAGAFTGIFAISLGIGGGLLIAPIL
FT                   AYFLGYDSKKVVSLSLFFVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGVFIGI
FT                   KIIEKMHISAHRKILLCVYALSILGTTHSLLNKLNLINF"
FT   gene            349432..349557
FT                   /locus_tag="C1336_000060080"
FT                   /note="C1336_000060080 identified by Glimmer3 with a raw
FT                   score of 4.40."
FT   CDS             349432..349557
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060080"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060080 identified by Glimmer3 with a raw
FT                   score of 4.40. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31502.1"
FT                   /translation="MFQNIIKYKDFIIFILNLKQNLYLLIKINLDFKNFHKSLNF"
FT   gene            349727..350978
FT                   /locus_tag="C1336_000060170"
FT                   /note="Features C1336_000060081, C1336_000060082 joined to
FT                   form C1336_000060170 to correct 454 sequencing error
FT                   (C1336_000060081 identified by Glimmer3 with a raw score of
FT                   8.51, C1336_000060082 identified by Glimmer3 with a raw
FT                   score of 13.61)."
FT   CDS             join(349727..350134,350136..350978)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060170"
FT                   /product="anthranilate synthase component I"
FT                   /note="Features C1336_000060081, C1336_000060082 joined to
FT                   form C1336_000060170 to correct 454 sequencing error
FT                   (C1336_000060081 identified by Glimmer3 with a raw score of
FT                   8.51, C1336_000060082 identified by Glimmer3 with a raw
FT                   score of 13.61). Gene function extrapolated from
FT                   CJJ81176_0369 (CP000538.1) after blastn alignment (99.09
FT                   percent identity over a 771 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31503.1"
FT                   /translation="MFVKNVNFYYRQILEKFENSYFAEDLTKVIIGIDCDYLDANELSF
FT                   SEFKAKYYEALSKNKICDFAGFFGVFSANFVSLFEKIPLSSKKNYDFPLFLFANAKAYL
FT                   IYEKNSKMFFKFGASKYFEYLKDDIEPIKKKQKNAFEILNSLEDEKNDFLKMCEKAKEY
FT                   LLSGDIFQVVLSKQLCIKHQVNAFDYYESLSALNPSAYMYYFPSKYGVVLGSSPEFLLK
FT                   IKKREIYLAPIAGTRNLENNCDLLALEKDLLSDEKELSEHKMLVDLARNDASKFGAQTR
FT                   VENLFSIIKNKFVMHIVSEVYANMKEDASIFDVIEAVFPAGTLSGAPKIRALEIISELE
FT                   DCDRGIYGGAVGFLNFNEDITLAILIRCAFFTQDKAYLASGAGIVLQSESQKEYAEICA
FT                   KRKALLVAFENLKKENQ"
FT                   /artificial_location="low-quality sequence region"
FT   gene            350975..352576
FT                   /locus_tag="C1336_000060083"
FT                   /note="C1336_000060083 identified by Glimmer3 with a raw
FT                   score of 15.75."
FT   CDS             350975..352576
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060083"
FT                   /product="anthranilate synthase component II"
FT                   /note="C1336_000060083 identified by Glimmer3 with a raw
FT                   score of 15.75. Gene function extrapolated from C8J_0323
FT                   (CP000814.1) after blastn alignment (98.50 percent identity
FT                   over a 533 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31504.1"
FT                   /translation="MILLIDNYDSFVFNVKSMLEQLSNDEILVRRNDEISLSEIKNLNP
FT                   THIILSPGPKHPSQSGICLEIFKARLNIPVLGICLGHQALALAFDSLVVKMQEPMHAKN
FT                   SLIKQCKENELFSNLPPNFSVMRYHSLEVKQLSDELEILALDEKGVIMALGHKNLPYYG
FT                   VQFHPESYFSEYGLQLFSNFLKQDIKKSQKQENPLSFYLQKMSENHFLQSDDFEQICKI
FT                   IMSKDYEILQVAALLILITEKSLNEKSLSAFVRQILRYSQTFSDESEMIDICGTGGDGF
FT                   KSINVSTTSAFILAALGVKVAKHGNRAISSSSGSTDVLEALNITTPNTLESALKQLNNQ
FT                   GLSFLHAPFFHPLVGELKEIRSRLGVRTVFNVLGPLLHPNLKLKYQLMGNYHAPVHRLL
FT                   IEVLKNLGRKKALVVRGNDGMDELSICDESKIYELCEGEILEYSICPEQFGFKRAFHSE
FT                   IIGSSAYENAKDLKDILSGKMQGAKFDLVVLNAMFALYTANKASSPLVAKDMILEAIYS
FT                   GKVIEYFKEYQAYAKA"
FT   gene            352563..353162
FT                   /locus_tag="C1336_000060084"
FT                   /note="C1336_000060084 identified by Glimmer3 with a raw
FT                   score of 16.82."
FT   CDS             352563..353162
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060084"
FT                   /product="N-(5'phosphoribosyl)anthranilate isomerase"
FT                   /note="C1336_000060084 identified by Glimmer3 with a raw
FT                   score of 16.82. Gene function extrapolated from
FT                   CJJ81176_0371 (CP000538.1) after blastn alignment (96.86
FT                   percent identity over a 541 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31505.1"
FT                   /translation="MLKLKICGIKDEKNAKDLAFLNIDFFGLIFAKSPRRVSLNQARNL
FT                   SAIFHEKDKKVVGVFVDENLEQILRCIKEVKLDGMQIYRTITKEEFKILKVQNVFVWQV
FT                   ISVENSLDLKSEIFADLVLFDAKGILKGGNGISFNWTLLSSYTKDFALAGGIGLDNIHK
FT                   AVKTGAKILDLNSKLEDEKGLKDINKIKQILKELKK"
FT   gene            353159..354338
FT                   /locus_tag="C1336_000060171"
FT                   /note="Features C1336_000060085, C1336_000060086 joined to
FT                   form C1336_000060171 to correct 454 sequencing error
FT                   (C1336_000060085 identified by Glimmer3 with a raw score of
FT                   11.78, C1336_000060086 identified by Glimmer3 with a raw
FT                   score of 16.86)."
FT   CDS             join(353159..353458,353460..354338)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060171"
FT                   /product="tryptophan synthase beta chain"
FT                   /note="Features C1336_000060085, C1336_000060086 joined to
FT                   form C1336_000060171 to correct 454 sequencing error
FT                   (C1336_000060085 identified by Glimmer3 with a raw score of
FT                   11.78, C1336_000060086 identified by Glimmer3 with a raw
FT                   score of 16.86). Gene function extrapolated from C8J_0325
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 78 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31506.1"
FT                   /translation="MKKAYYGDFGGQFLPESAMFALNELESAFLKFSKDKLFKKELNDL
FT                   LKTYVGRPTPLYFARNLSKKYQHEIYLKREDLNHTGAHKINNAIAQALLAKKMGKKKII
FT                   AETGAGQHGLATATAAALLGLECEIYMGATDVQRQALNVYKMELLGAKIHAVQSGLKTL
FT                   KEATTAAIQAWVGDIKNIFYVVGSAVGPYPYPKMVTHFQSIIGKECKMQLQKLNKKVDY
FT                   IIAAVGGGSNAAGIFYDFIKDENVKLIGIEAGGLGIDTPYHAATLNKGKTGIIHGMKTK
FT                   VLQDDLGNILPVHSVSAGLDYPGIGPLHAFLFESKRAQYHAISDEECMQALKLLCKEEG
FT                   IIAAIESSHALAFLEKLCPTLKKKSVIVVNLSGRGDKDMQMIRDYKKGVIYG"
FT                   /artificial_location="low-quality sequence region"
FT   gene            354331..355080
FT                   /locus_tag="C1336_000060087"
FT                   /note="C1336_000060087 identified by Glimmer3 with a raw
FT                   score of 15.22."
FT   CDS             354331..355080
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060087"
FT                   /product="tryptophan synthase alpha chain"
FT                   /note="C1336_000060087 identified by Glimmer3 with a raw
FT                   score of 15.22. Gene function extrapolated from C8J_0326
FT                   (CP000814.1) after blastn alignment (99.18 percent identity
FT                   over a 245 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31507.1"
FT                   /translation="MVDFRKFYKENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELG
FT                   VAYSDPIADGEIIADAAKIALNQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGLEK
FT                   FVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKG
FT                   FIYLLASIGITGTKSVEEAILQDKVKEIRFFTNLPIFVGFGIQNNQDVKRMRKVADGVI
FT                   VGTSIVKCFKQGNLDIIMKDIEEIFKK"
FT   gene            355151..355574
FT                   /locus_tag="C1336_000060172"
FT                   /note="Features C1336_000060088, C1336_000060089 joined to
FT                   form C1336_000060172 to correct 454 sequencing error
FT                   (C1336_000060088 identified by Glimmer3 with a raw score of
FT                   11.70, C1336_000060089 identified by Glimmer3 with a raw
FT                   score of 2.16)."
FT   CDS             join(355151..355321,355323..355574)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060172"
FT                   /product="hypothetical protein"
FT                   /note="Features C1336_000060088, C1336_000060089 joined to
FT                   form C1336_000060172 to correct 454 sequencing error
FT                   (C1336_000060088 identified by Glimmer3 with a raw score of
FT                   11.70, C1336_000060089 identified by Glimmer3 with a raw
FT                   score of 2.16). Gene function extrapolated from
FT                   CJJ81176_0374 (CP000538.1) after blastn alignment (99.76
FT                   percent identity over a 423 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31508.1"
FT                   /translation="MLKILEYSITHFCEHILRLRIEAAQDISGELYGASIPIMGKSEGE
FT                   CNFYLFFPKEFLKKIAEILINDEKFKEDDWCDLTKECANQIIGYAKNLLNDAKGDDEYK
FT                   LGIPEYLGKVDFSEIVLDEALTYKFENCYFRIGYCK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            355574..355882
FT                   /locus_tag="C1336_000060090"
FT                   /note="C1336_000060090 identified by Glimmer3 with a raw
FT                   score of 13.03."
FT   CDS             355574..355882
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060090"
FT                   /product="flagellar motor switch protein"
FT                   /note="C1336_000060090 identified by Glimmer3 with a raw
FT                   score of 13.03. Gene function extrapolated from C8J_0328
FT                   (CP000814.1) after blastn alignment (99.35 percent identity
FT                   over a 309 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31509.1"
FT                   /translation="MSDDIEFNIHHGLLQSYEDILDITVDFVSELGTTNMSVAELLKLE
FT                   VGSVIDLEKPAGESVELYINKRIFGKGEVMVYEKNLAIRINEILDSKTVLQYFKKEI"
FT   gene            355883..356680
FT                   /locus_tag="C1336_000060091"
FT                   /note="C1336_000060091 identified by Glimmer3 with a raw
FT                   score of 7.91."
FT   CDS             355883..356680
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060091"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060091 identified by Glimmer3 with a raw
FT                   score of 7.91. Gene function extrapolated from
FT                   CJJ81176_0376 (CP000538.1) after blastn alignment (99.07
FT                   percent identity over a 536 bp alignment) - for clarity,
FT                   the original product name 'conserved domain protein' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31510.1"
FT                   /translation="MRLLVLFFLILPLYSVELIGYNIYDRNDRVDLMLSFDNTYNGKIS
FT                   QKKEKNLTLLTFSDLTYSKDELKELNSQLVDKISISSKNNNTYIMLQNKQNINLELSSI
FT                   NDKFGVRIRAIEQGKANIESVPTTTANNSQELMPKPKSTSLEGYDYTNYILVMLILVIL
FT                   LIVLWWFKKTMVYKNNNVSRDFTMIFQRFLDKNNQLVVFDHANKRYTMIIGNSNVLLES
FT                   VEIPEEQIIKHTEKTEKNFDSFFEENKKRIQNLIEQRQKGKKS"
FT   gene            complement(356677..358137)
FT                   /locus_tag="C1336_000060092"
FT                   /note="C1336_000060092 identified by Glimmer3 with a raw
FT                   score of 9.26."
FT   CDS             complement(356677..358137)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060092"
FT                   /product="phosphatase, Ppx/GppA family"
FT                   /note="C1336_000060092 identified by Glimmer3 with a raw
FT                   score of 9.26. Gene function extrapolated from C8J_0330
FT                   (CP000814.1) after blastn alignment (99.58 percent identity
FT                   over a 479 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31511.1"
FT                   /translation="MAKKTAVVDLGSNSIRMVIFEKTSRYGFYTTCEYKRKVRLGENAY
FT                   NNGKILQEEAMQRAEDALAFFKQCALKHKCKKIFIVGTSALRDAPNSKNFIKRIKDNLS
FT                   LNIRCIDGKSESYLGGLAALNLLSPFKDGTTLDIGGGSSELCLIKNNRIISCISLDIGT
FT                   VRLKELFYDTGKMDSLEEFIKPILEQIPKEFCNQNLIAIGGSLRAISNSIMQKNSYPLK
FT                   NLHDFRYMLDEEKGHILKIFNSNLDSLINFGIKKDRFDTIKEGIFIFLKIAEKIKAKQV
FT                   ITSGVGIREGVYLQDLLRPKITFPPNFNPSLKCLQDKFLQSKQKNKTPHFALQIFTTLK
FT                   NLHKLNDNYKHTLLNAAKLCHIGEYLNLYFANEHSAHFVLGGLNYGFSHKEKALIASII
FT                   KLNGKKVNPYNLEPYKQLLPNIHTISWLNFILCLAKTLSTNEDKIDFAFANNTLYIYQE
FT                   NKILNLPKDELKKIAKPATIALAINQKI"
FT   gene            complement(358137..358382)
FT                   /locus_tag="C1336_000060093"
FT                   /note="C1336_000060093 identified by Glimmer3 with a raw
FT                   score of 3.02."
FT   CDS             complement(358137..358382)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060093"
FT                   /product="putative ferredoxin"
FT                   /note="C1336_000060093 identified by Glimmer3 with a raw
FT                   score of 3.02. Gene function extrapolated from C8J_0331
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 246 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31512.1"
FT                   /translation="MSLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVNDF
FT                   SEPACIVACPYECIIPDPDNVETIEELKLKHRDREF"
FT   gene            complement(358495..359166)
FT                   /locus_tag="C1336_000060094"
FT                   /note="C1336_000060094 identified by Glimmer3 with a raw
FT                   score of 11.37."
FT   CDS             complement(358495..359166)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060094"
FT                   /product="two-component regulator"
FT                   /note="C1336_000060094 identified by Glimmer3 with a raw
FT                   score of 11.37. Gene function extrapolated from C8J_0332
FT                   (CP000814.1) after blastn alignment (99.85 percent identity
FT                   over a 672 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31513.1"
FT                   /translation="MRILVIEDEISLNKTIIDNLNEFGYQTDSSENFKDGEYFIGIRHY
FT                   DLVLANWTLPDGDGAELVNTIKHKSPRTSVMIMSSKTDKETEIKALKAGADDFVKKPLD
FT                   FDILLARIEARLRLGGTNVIKIEDLVIDPDEEKITYKGQDIELKGKPFEVLTHLARHSD
FT                   QIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFCFPKK
FT                   S"
FT   gene            complement(359245..359562)
FT                   /locus_tag="C1336_000060095"
FT                   /note="C1336_000060095 identified by Glimmer3 with a raw
FT                   score of 2.73."
FT   CDS             complement(359245..359562)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060095"
FT                   /product="FolB domain protein"
FT                   /note="C1336_000060095 identified by Glimmer3 with a raw
FT                   score of 2.73. Gene function extrapolated from C8J_0333
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 138 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31514.1"
FT                   /translation="MQSHIKIKFHFKCIIGILDFERRKKQKIIIKLKAKANEFLNYAEV
FT                   ITKIKKWYKKEEFYTLEESLDFVSLNLKKDFPNLTNLNIKIFKPHIIKNATVGVKLKKK
FT                   Y"
FT   gene            complement(359547..360155)
FT                   /locus_tag="C1336_000060096"
FT                   /note="C1336_000060096 identified by Glimmer3 with a raw
FT                   score of 10.35."
FT   CDS             complement(359547..360155)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060096"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060096 identified by Glimmer3 with a raw
FT                   score of 10.35. Gene function extrapolated from
FT                   CJJ81176_0381 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 143 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein
FT                   TIGR00023' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31515.1"
FT                   /translation="MENLIIYAFIYLLGSIPFGLILAKFFAKTDIKKEGSKSIGATNVL
FT                   RVVKEKNPKLAKKLAIATIILDFAKAAIPLLILKFLHYDQALLWSVAVLAIFGHCFSIY
FT                   LLFEGGKGIATGAGAMIVLLPLEVLTAFIVWVVIGKIFKISSLASLAALLAFVASSFIF
FT                   NYDLEIHTHAPVFIIAFIIVYKHLPNIKRLIFKEECKVI"
FT   gene            360355..361380
FT                   /locus_tag="C1336_000060097"
FT                   /note="C1336_000060097 identified by Glimmer3 with a raw
FT                   score of 15.40."
FT   CDS             360355..361380
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060097"
FT                   /product="putative cytochrome C551 peroxidase"
FT                   /note="C1336_000060097 identified by Glimmer3 with a raw
FT                   score of 15.40. Gene function extrapolated from Cj0358
FT                   (AL111168.1) after blastn alignment (97.86 percent identity
FT                   over a 1026 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31516.1"
FT                   /translation="MKVKSLLIASLVAFSSLNAASLIDEAKNSGLVALPKDQKGVDEIL
FT                   KQNGVKASEFTLEKAELGKKLYFEPRLSKSGIISCNTCHNVGLGGIDGISAAIGHKWTA
FT                   NPHHLNSPTVYNAVLNSTQFWDGRAGTLADQAKGPIQADPEMATPAKLAVEKISSLPEY
FT                   VSEFKKIYGKSGVNFDNIADAIANFERTLITPSRFDKFLEGDEKALTKEEQQGLKLFID
FT                   KGCVACHNGVNLGGNMQAFEVAGKYKFANLGDFKGDANGMVKTPTLRNVAETAPYFHNG
FT                   AIWNLKDAIKEMGSVQLGIKISDKEAKSIETFLKSLTGTKPAIVYPQLPISTERTPKPE
FT                   L"
FT   gene            361475..362812
FT                   /locus_tag="C1336_000060098"
FT                   /note="C1336_000060098 identified by Glimmer3 with a raw
FT                   score of 16.72."
FT   CDS             361475..362812
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060098"
FT                   /product="phosphoglucosamine mutase"
FT                   /note="C1336_000060098 identified by Glimmer3 with a raw
FT                   score of 16.72. Gene function extrapolated from
FT                   CJJ81176_0383 (CP000538.1) after blastn alignment (98.41
FT                   percent identity over a 126 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31517.1"
FT                   /translation="MKLFGTDGVRGKAGEFLDSFLAMRLAMAAGIYFKDKSITNNILVG
FT                   KDTRRSGYMIENAIVSGLTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNPYY
FT                   DNGIKFFDAHGNKLSEDIEKRIEEIYFDDKLIQASKVDMEKIGQAKRIDDVIGRYIVSI
FT                   KNSFPKDLTLKSLRVVLDVAHGAAYKVAPTVFKELGAEVIVMSDKPNGLNINENCGALH
FT                   PANLAAEVKRLRADVGFAFDGDADRLVVVDEKGEVANGDSLLGVLALYLKEQGKLQSSV
FT                   VATIMSNGALKEFLNKHGIELDTCNVGDKYVLEKLKANGGNFGGEQSGHIIFSNYAKTG
FT                   DGLIAALQFSALMLSKKKSASSILGQVKPYPQLLTNLKIAEKKDLDKIKGLKELKKDLE
FT                   NKNINTLFRYSGTENLIRLLLEAKDIKLLEKEMKNVVEFFKKALNG"
FT   gene            362805..363275
FT                   /locus_tag="C1336_000060099"
FT                   /note="C1336_000060099 identified by Glimmer3 with a raw
FT                   score of 11.06."
FT   CDS             362805..363275
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060099"
FT                   /product="lipoprotein signal peptidase"
FT                   /note="C1336_000060099 identified by Glimmer3 with a raw
FT                   score of 11.06. Gene function extrapolated from C8J_0337
FT                   (CP000814.1) after blastn alignment (98.94 percent identity
FT                   over a 378 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31518.1"
FT                   /translation="MAKTFKFIFYFWGAFVLVFTLDQWVKSLTLAGLRWQSEYLDLTYA
FT                   LNTGVAFSMLSFLEHNLKYLHLALIGVLFIYLFWQKTLLKTHSIAFGMMLGAGVSNLLD
FT                   RFIHGGVVDMFFWHKWFNFAIFNVADVMINISVALILIQEIFKKRKKDDRMD"
FT   gene            363259..363711
FT                   /locus_tag="C1336_000060100"
FT                   /note="C1336_000060100 identified by Glimmer3 with a raw
FT                   score of 8.29."
FT   CDS             363259..363711
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060100"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000060100 identified by Glimmer3 with a raw
FT                   score of 8.29. Gene function extrapolated from C8J_0338
FT                   (CP000814.1) after blastn alignment (98.23 percent identity
FT                   over a 453 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31519.1"
FT                   /translation="MTEWINDYYFWIKWVHYLAFVSWMAGLFYLPRLFVYHAEHKDNKG
FT                   FVEIVKIQERKLYFYIQTPAMIVTLITGSLMLHAHKEVLMVGSGFMHVKLTCVTLLIIF
FT                   HIHNYYCLKALANDTSAKSGKYFRIYNEFPTIMFIIIALMMVVRPF"
FT   gene            complement(363708..365054)
FT                   /locus_tag="C1336_000060101"
FT                   /note="C1336_000060101 identified by Glimmer3 with a raw
FT                   score of 12.44."
FT   CDS             complement(363708..365054)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060101"
FT                   /product="putative oxygen-independent coproporphyrinogen
FT                   III oxidase"
FT                   /note="C1336_000060101 identified by Glimmer3 with a raw
FT                   score of 12.44. Gene function extrapolated from Cj0363c
FT                   (AL111168.1) after blastn alignment (98.59 percent identity
FT                   over a 1347 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31520.1"
FT                   /translation="MNLFQNLALKYSHTMMEKSLQKGFNVELLKQPEEKIPKQDKSYML
FT                   YAHVPFCHTFCPYCSFHKYYYDENLAKVYFQNLREEIKIMKDKGFDFTSMYVGGGTTLI
FT                   NEEELLKTLELCKKLFNIKEISCESDPNHIDPNKLFMFKGIIDRLSCGIQSFDDETLKK
FT                   VARYNKFGSSKELQEKISKALGILPIFSIDLIFNLPGQSEKQLLNDLGIAKNLAPQQIT
FT                   TYPLMKSNLTKDNIAKSLGVSIKDNEFTYYQIIREFFKDYTQNNGWSFSLEKNKLNDEY
FT                   VSSHHEYLGVGSGAFSFLDGELLINAFNLNDYAKFIQEKQNANIAKACFDKKEIIKYVF
FT                   LTEIFSGKIEIDKFNKTLNCNLEKELFIELLGLKTSGAIIKDQNALIATEFGQYLFVVL
FT                   MKDFYTGMDLVRAVFRDDKRLKNKDYIDIMKENIDPLNSASMEFKAETN"
FT   gene            365182..365433
FT                   /locus_tag="C1336_000060102"
FT                   /note="C1336_000060102 identified by Glimmer3 with a raw
FT                   score of 12.55."
FT   CDS             365182..365433
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060102"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060102 identified by Glimmer3 with a raw
FT                   score of 12.55. Gene function extrapolated from
FT                   CJJ81176_0387 (CP000538.1) after blastn alignment (99.60
FT                   percent identity over a 252 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31521.1"
FT                   /translation="MDKAKIVQNLNALFKQRAEFYSYFDENIAKINNTEVFDFKNAKNL
FT                   NPEEVYRQFYHFDYAIRKLLPAIYKAYEITDADLDKDF"
FT   gene            complement(365456..366934)
FT                   /locus_tag="C1336_000060103"
FT                   /note="C1336_000060103 identified by Glimmer3 with a raw
FT                   score of 13.05."
FT   CDS             complement(365456..366934)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060103"
FT                   /product="RND efflux system, outer membrane lipoprotein
FT                   CmeC"
FT                   /note="C1336_000060103 identified by Glimmer3 with a raw
FT                   score of 13.05. Gene function extrapolated from C8J_0341
FT                   (CP000814.1) after blastn alignment (98.57 percent identity
FT                   over a 699 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31522.1"
FT                   /translation="MNKIISISAIASFTLLISACSLSPNLNIPEANYSIDNKFGALSWE
FT                   KENNSSITKNWWKDFDDENLNKVVDLALKNNNDLKLAFIHMEQAAAQLGIDFSSLLPKF
FT                   DGSASGNRAKTAINAPSNRTGEVSYGNDFKMGLNLSYEIDLWGKYRDTYRASKSGFKAS
FT                   EYDYEAARLSVISNTVQTYFNLVNAYENENALKEAYESAKEIYRINDEKFQVGAVGEYE
FT                   LAQARANLESMALQYNEAKLNKENYLKALKILTSNDLNDILYKNQNYQVFNLKEFDIPT
FT                   GISSTILLQRPDIGSSLEKLTQQNYLVGVARTAFLPSLSLTGLLGFESGDLDTLVKGGS
FT                   KTWNIGGNFTLPIFHWGEIYQNVNLAKLNKDEAFVNYQNTLITAFGEIRYALVARKTIR
FT                   LQYDNAQASEQSYKRIYEIAKERYDIGEMSLQDYLESRQNWLNAAVAFNNTKYSYANSI
FT                   VDVIKAFGGGFEQSEDTGKNIKEESKNLDMSFRE"
FT   gene            complement(366927..370049)
FT                   /locus_tag="C1336_000060104"
FT                   /note="C1336_000060104 identified by Glimmer3 with a raw
FT                   score of 11.10."
FT   CDS             complement(366927..370049)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060104"
FT                   /product="inner membrane efflux transporter CmeB (multidrug
FT                   efflux system CmeABC)"
FT                   /note="C1336_000060104 identified by Glimmer3 with a raw
FT                   score of 11.10. Gene function extrapolated from Cj0366c
FT                   (AL111168.1) after blastn alignment (98.45 percent identity
FT                   over a 1035 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31523.1"
FT                   /translation="MFSKFFIERPVFASVVAIIISLAGVIGLTNLPIEQYPSLTPPTVK
FT                   VSATYTGADAQTIASTVASPIEDAINGADNMIYMDSTSSSSGTMSLTVYFDIGTDPDQA
FT                   TIDVNNRISAATAKMPDAVKKLGVTVRKTSSATLAAISMYSNDGSMSAVDVYNYIALNV
FT                   LDELKRVPGVGDANAIGNRNYSLRIWLKPDLLNKFGITATDVISAVNDQNAQYATGKIG
FT                   EEPVTQKSPYVYSITMQGRLQNPSEFENIILRTNDDGSFLRLKDIADVEIGSQQYSSQG
FT                   RLNGNDAVPIIINLQSGANALHTAELVQAKMQELSKNFPKGLTYKIPYDTTKFVIESIK
FT                   EVIKTFVEALILVIIVMYMFLKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFA
FT                   LILAIGIVVDDAIIVVENIDRILHENEQISVKDAAIQAMQEVSSPVISIVLVLCAVFIP
FT                   VSFISGFVGEIQRQFALTLAISVAISGFVALTLTPSLCALFLRRNEGEPFKFVKKFNDF
FT                   FDWSTSVFSTGVAYILKRTIRFVLIFCIMLGAIFYLYKAVPSSLVPEEDQGLMIGIINL
FT                   PSASALHRTISEVDHISQEVLKTNGIKDAMAMIGFDLFTSSLKENAAAMFIGLQDWKDR
FT                   NVSADEIAMELNKKFAFDRNASSIFIGLPPIPGLSITGGFEMYVQNKSGKSYDEIQKDV
FT                   NKLVAVANQRKELSRVRTTLDTTFPQYKLIIDRDKLKHYNLNMQDVFNTMNATIGTYYV
FT                   NDFSMLGKNFQVNIRAKGDFRNTQDALKNIFVRSNDGKMIPLDSFLTLQRSSGPDDVKR
FT                   FNLFPAAQVQGQPAPGYTSGQAIEAIAQVAKETLGDDYSIAWSGSAYQEVSSKGTASYA
FT                   FALGMIFVFLILAAQYERWLIPLAVVTAVPFAVFGSFLLVYLRGFSNDIYFQTGLLLLI
FT                   GLSAKNAILIVEFAMEERFKKGKGVFEAAVAAAKLRFRPIIMTSLAFTFGVLPMIFATG
FT                   AGSASRHSLGTGLIGGMIAASTLAIFFVPLFFYLLENFNEWLDKKRGKVHE"
FT   gene            complement(370049..371152)
FT                   /locus_tag="C1336_000060105"
FT                   /note="C1336_000060105 identified by Glimmer3 with a raw
FT                   score of 10.23."
FT   CDS             complement(370049..371152)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060105"
FT                   /product="RND efflux system, membrane fusion protein CmeA"
FT                   /note="C1336_000060105 identified by Glimmer3 with a raw
FT                   score of 10.23. Gene function extrapolated from
FT                   CJJ81176_0390 (CP000538.1) after blastn alignment (96.38
FT                   percent identity over a 1104 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31524.1"
FT                   /translation="MKLFQNNTILALSVVLLLTACSKEEAPKIQMPPQPVTTMSAKSED
FT                   LSLSFTYPAKLVSDYDVIIKPQVSGVIVNKLFKAGDKVKKGQTLFIVEQDKFKASVDSA
FT                   YGQALMAKATFENASKDFNRSKALFSKNAISQKEYDSSLATFNNAKASLTTARAQLANA
FT                   RIDLDHTEIKAPFDGTIGDALVNIGDYVSVSTTELVRVTNLNPIYADFFISDTDKLNLV
FT                   RNTQSGKWDLDSIHANLNLNGETVQGKLYFIDSVIDANSGTVKAKAVFDNNNSTLLPGA
FT                   FATITSEGFIQKNGFKVPQIAIKQDQNDVYVLLVKNGKVEKSSVHISYQNNEYAIIDKG
FT                   LQNGDKIILDNFKKIQVGSEVKEIGAQ"
FT   gene            complement(371247..371879)
FT                   /locus_tag="C1336_000060106"
FT                   /note="C1336_000060106 identified by Glimmer3 with a raw
FT                   score of 9.93."
FT   CDS             complement(371247..371879)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060106"
FT                   /product="transcriptional regulator, TetR family"
FT                   /note="C1336_000060106 identified by Glimmer3 with a raw
FT                   score of 9.93. Gene function extrapolated from
FT                   JJD26997_1589 (CP000768.1) after blastn alignment (97.46
FT                   percent identity over a 552 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31525.1"
FT                   /translation="MNSNRTPSQKVLARQEKIKAVALELFLTKGYQETSLSDIIKLSGG
FT                   SYSNIYNSFKSKEGLFFEILDDICKKHFHLIYSKTQEIENGTLKEILTSFGLTFIEIFN
FT                   QPEAVAFGKIVYSQVYDKDRHLANWIENNQQNFSYNILMDFFKQQNNSYMKKNAEKLAV
FT                   LFCTMLKEPYHHLNVLINAPLKNKKEQKEHVEFVVNVFLNGINGSKA"
FT   gene            complement(371876..373063)
FT                   /locus_tag="C1336_000060107"
FT                   /note="C1336_000060107 identified by Glimmer3 with a raw
FT                   score of 4.90."
FT   CDS             complement(371876..373063)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060107"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060107 identified by Glimmer3 with a raw
FT                   score of 4.90. Gene function extrapolated from C8J_0345
FT                   (CP000814.1) after blastn alignment (98.77 percent identity
FT                   over a 81 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31526.1"
FT                   /translation="MPFVLIFLFLFIFFITTLGGRIWCAWSCPQTIFRVIYRDIIQTKI
FT                   LKIRKNINNKQKEYEGQYFKKFLGVIIFYFISLVAVSNLLWYFIPPEDFFNYIQNPGEH
FT                   LLLLGVLFCASLLFTLDITYLQEKFCIYVCPYARIQSVMFDHDTMQVIYDEKRGGLIYD
FT                   GHIKLHKKPPEGECIGCEACVSICPTHIDIRKGMQLECINCLECADACSKVQSKFNRPS
FT                   LINWTSAKAIETRSKVHYLRFRTIAYFIVLLIALLALIIMGSKKESMLLNINRSSELYN
FT                   ISNVKGKLVISNAYTFLFQNTDSKPHEYYFTANLDGINDGIEIIRPNKPFKLKAGEQVK
FT                   KIVVIKATKNLANNDKKDVIFPLHIKAYAKDNEKISVFRKSIFVYPKNTLTKDKK"
FT   gene            373403..373615
FT                   /locus_tag="C1336_000060108"
FT                   /note="C1336_000060108 identified by Glimmer3 with a raw
FT                   score of 8.46."
FT   CDS             373403..373615
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060108"
FT                   /product="30S ribosomal protein S21"
FT                   /note="C1336_000060108 identified by Glimmer3 with a raw
FT                   score of 8.46. Gene function extrapolated from C8J_0346
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 127 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31527.1"
FT                   /translation="MPGIKVHPNESFDEAYRKFKKQVDRNLVVTEVRARRFFEPMTEIR
FT                   KKQKISARKKMLKRLYMLRRYESRL"
FT   gene            373736..374341
FT                   /locus_tag="C1336_000060109"
FT                   /note="C1336_000060109 identified by Glimmer3 with a raw
FT                   score of 18.09."
FT   CDS             373736..374341
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060109"
FT                   /product="lipoprotein, putative"
FT                   /note="C1336_000060109 identified by Glimmer3 with a raw
FT                   score of 18.09. Gene function extrapolated from CJE0420
FT                   (CP000025.1) after blastn alignment (97.96 percent identity
FT                   over a 587 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31528.1"
FT                   /translation="MKKIKKIIQIGMIGGLAAVAGGALAGCGSNNDNTDTLNQAANAQG
FT                   AFVIIEETAPGQYKIKDQYPSDETRVVLKDLNGTERILSKEEMDALIKEEAAKIDNGTS
FT                   NLTKDNGQISSGGLSLGETLLASAAGAILGSWIGSKLFNNQNFANQQRGAFSNQSAYQR
FT                   SVNSFNKAGTTSSASSAKKSGFFGGGSKAASSSSSFGS"
FT   gene            374351..375520
FT                   /locus_tag="C1336_000060110"
FT                   /note="C1336_000060110 identified by Glimmer3 with a raw
FT                   score of 14.70."
FT   CDS             374351..375520
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060110"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060110 identified by Glimmer3 with a raw
FT                   score of 14.70. Gene function extrapolated from C8J_0348
FT                   (CP000814.1) after blastn alignment (98.29 percent identity
FT                   over a 1168 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31529.1"
FT                   /translation="MQLLQVDKLQKDYLENIGFSWHTDEDGSDYISNKLVCVKESEANA
FT                   YYEAVNELYDMFIAAAQEVIDNDRFDELGIPFNLIDAIKMSWENEVHWHLYGRFDLAGG
FT                   LDGKPIKLIEFNADTPTALFESAILQWALLKQNGMDESAQFNSIYESLMDNFKRLITLD
FT                   ESVEGFEEHYQGWKILFSSVAGSKEEEITTKLLSHIANEAGFQTNFSFVDEVEFSEEGI
FT                   FKEGENYEYWFKLIPWEDIAIEEGELAMLLTQIMRNQRAIILNPAYTLLFQSKGILKIL
FT                   WELYPNHPLLLETKDTPLEGKNYVKKPVFGREGANISIIKDGKTLHENVGPYGNNKAIY
FT                   QEYVEFNSCENEYYQAGVFFAYEGCGLGFRKGGLVLDNYSKFVGHIIKD"
FT   gene            375524..376459
FT                   /locus_tag="C1336_000060111"
FT                   /note="C1336_000060111 identified by Glimmer3 with a raw
FT                   score of 15.92."
FT   CDS             375524..376459
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060111"
FT                   /product="putative D-2-hydroxyacid dehydrogenase"
FT                   /note="C1336_000060111 identified by Glimmer3 with a raw
FT                   score of 15.92. Gene function extrapolated from C8J_0349
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 301 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31530.1"
FT                   /translation="MKIVCLDAATLGDYDLSVFEKFGSLQIYTTTNKEQTIERLKDANV
FT                   AMTNKVVIDKDVIDACKNLKLILETATGVNNIDIEYAKEKGIIVKNAAGYSTMSVVQHT
FT                   FAFMFAFLNQVLYYDKWSKEGKWCESPIFTDYSRILNTLSGKKHGIIGLGTIGKEVAKI
FT                   SKAFGAEIYYYSTSGANKNADFIHLELKDLLKTCDIISIHAPLNEKTKNLLTFEELKLL
FT                   KDNAILINVGRGGIINENDLAKIIDEKNIRVGLDVLEIEPMMKNHPLLSIKNKENLIIT
FT                   PHVAWASKEALNALMDIVYNNLKEWIENGK"
FT   gene            376449..376940
FT                   /locus_tag="C1336_000060112"
FT                   /note="C1336_000060112 identified by Glimmer3 with a raw
FT                   score of 13.92."
FT   CDS             376449..376940
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060112"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060112 identified by Glimmer3 with a raw
FT                   score of 13.92. Gene function extrapolated from
FT                   CJJ81176_0398 (CP000538.1) after blastn alignment (98.98
FT                   percent identity over a 492 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31531.1"
FT                   /translation="MASEHSFDISAALDKQELKNAFEQAKKELDSRYDLKGIKCEIDLN
FT                   EKESIFKLSSSSEGKLDVLKDIVISKLIKRGINPNAIKELSRESGAMFRLNLKANDAID
FT                   SENAKKINKAIKDSKLKVNSSIRGEEIRVVAKQIDDLQAVMKLVKELDLELNISFKNLK
FT                   "
FT   gene            376949..377425
FT                   /locus_tag="C1336_000060113"
FT                   /note="C1336_000060113 identified by Glimmer3 with a raw
FT                   score of 13.71."
FT   CDS             376949..377425
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060113"
FT                   /product="lipoprotein, putative"
FT                   /note="C1336_000060113 identified by Glimmer3 with a raw
FT                   score of 13.71. Gene function extrapolated from CJE0424
FT                   (CP000025.1) after blastn alignment (98.30 percent identity
FT                   over a 294 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31532.1"
FT                   /translation="MKHCLALCFVFFLCACSVKNQNFSSQSLMVLIASPMIKINDAAFL
FT                   KKENNALNLEVYKLGQAFFELKIKDKICINAVCYDKKVFNQKFFKNVYYDDILSDILKA
FT                   NALWQGKNLEKTDCGFEQNLKAKNYEIFYQVCDNKVSFFDKISHTKIILTHIQN"
FT   gene            377436..378260
FT                   /locus_tag="C1336_000060114"
FT                   /note="C1336_000060114 identified by Glimmer3 with a raw
FT                   score of 11.56."
FT   CDS             377436..378260
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060114"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060114 identified by Glimmer3 with a raw
FT                   score of 11.56. Gene function extrapolated from CJE0425
FT                   (CP000025.1) after blastn alignment (98.15 percent identity
FT                   over a 811 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31533.1"
FT                   /translation="MKFFLLVFCFVNLALAQVYKGELYFYHLQDKEIFAIVYDNAPMTP
FT                   LFDRDKNQTSSSFLIVDDINGNLEIPLFKTNDFWQDERKKYKINSSKMLTYDNKNFQGE
FT                   NLGTTTLELIETQDGIRIKRSLDFIGFNDDFKEFHPVHKGVFSFEQIRQKPIFLQDGKI
FT                   SFEEWYYFYEDGMSRAILELNNFVYDINVHAFVKLNDLYNTENQKFQNLLHEKLKNTCD
FT                   ECFEDLQNLQFNNNFLLNNGKLKICYLPFEGHFLDENICVEFNEDELKEFKK"
FT   gene            378260..379972
FT                   /locus_tag="C1336_000060115"
FT                   /note="C1336_000060115 identified by Glimmer3 with a raw
FT                   score of 13.11."
FT   CDS             378260..379972
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060115"
FT                   /product="ATPase, AAA family protein"
FT                   /note="C1336_000060115 identified by Glimmer3 with a raw
FT                   score of 13.11. Gene function extrapolated from
FT                   CJJ81176_0401 (CP000538.1) after blastn alignment (99.53
FT                   percent identity over a 425 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31534.1"
FT                   /translation="MEKLKNFLSLKNIEDTQIYKELKCAKNEALILRELCRNYVVSISS
FT                   INAFTLLSTIFGNDKYLYLDALEDLKKLIERGFVNQNSSFFKSLENNKTQTLTLALLQS
FT                   ELSLSEYFLEFLEAKPRLNFEKQEAYADYLEYLKDEFVRIQLYERLSFIQKSAYNSEIK
FT                   NQIKLYEKHIKERLKKSKFYNVLADIFKEYNLEHKEQIIFLALLKEEYALSNESSISRE
FT                   MNSLLSLISENDLERHKNKKLLQENAPLLNLIEYDEYLNAFGDISKSFFIIDEILQRII
FT                   NFEPKQSKKIKIESVLKDQDIFELIEPSTDINDIIMPENTKELLENILKQQDKKVLERL
FT                   HSWGIKSNKNIEAKIIFYGPAGTGKTMSALAMAKSMKKSVLSFDCSKILSKWVGESEQN
FT                   VRKIFDTYKNIVQTCKQSPILLLNEADQFLSTRVDGSSGSDKMHNQMQNIFLEQIERFS
FT                   GVIIATTNFLESLDSAFSRRFDYKIEFKKPDFKDRLKIWEKFLPKKALFEKDFDINILS
FT                   NYELSGAQILMVVKNTALKVAVSQDGVFKMQDFIESIQKELNSSFDKSKIVGF"
FT   gene            complement(379937..380509)
FT                   /locus_tag="C1336_000060116"
FT                   /note="C1336_000060116 identified by Glimmer3 with a raw
FT                   score of 10.78."
FT   CDS             complement(379937..380509)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060116"
FT                   /product="putative ferric reductase-like transmembrane
FT                   protein"
FT                   /note="C1336_000060116 identified by Glimmer3 with a raw
FT                   score of 10.78. Gene function extrapolated from Cj0378c
FT                   (AL111168.1) after blastn alignment (98.36 percent identity
FT                   over a 122 bp alignment). Functional
FT                   classification-Membranes,lipoproteins and porins."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31535.1"
FT                   /translation="MQTKYFKFLAYFSFIISLIYGFYRIIKAFDFVKEAYIYTGIFALI
FT                   FLNLSLLFSLLKFKKTKNYPKILGIFATFWAILHFLNYFIFDRNAQILRLFDDISHRLL
FT                   EASGFIAFLIIFLMLLSSFKIFKKLSKIRKLGYLSLVLASYHYFLTPKVPMFWEWSTLI
FT                   VALFYFIVRYTKTLKKLKSNNLTFIKT"
FT   gene            complement(380509..381402)
FT                   /locus_tag="C1336_000060117"
FT                   /note="C1336_000060117 identified by Glimmer3 with a raw
FT                   score of 10.91."
FT   CDS             complement(380509..381402)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060117"
FT                   /product="oxidoreductase, molybdopterin binding, putative"
FT                   /note="C1336_000060117 identified by Glimmer3 with a raw
FT                   score of 10.91. Gene function extrapolated from
FT                   CJJ81176_0403 (CP000538.1) after blastn alignment (97.20
FT                   percent identity over a 894 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31536.1"
FT                   /translation="MIITPENLYKKRRDFLKLGAGVLISSSVLTSKLSALNFTNDTNPN
FT                   KLEISDEELATNYVNFYEFSTDKKKAVSLAQNFNTQNWKIDISGEIEKPLTLSMEDILK
FT                   FPLEERIYRFRCVETWSMVVPWVGFELRRLIEMAKPTSKAKFVKFTTLLDKSQFPDQDA
FT                   LFPTIDYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSIKSIV
FT                   KIEFTKEQPKSTWESYAPSEYGFYANVNPNVSHPRWSQANERTLGDFFTKPTLMFNGYE
FT                   KEVASLYKNMDLKVNF"
FT   gene            complement(381456..382136)
FT                   /locus_tag="C1336_000060118"
FT                   /note="C1336_000060118 identified by Glimmer3 with a raw
FT                   score of 12.57."
FT   CDS             complement(381456..382136)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060118"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060118 identified by Glimmer3 with a raw
FT                   score of 12.57. Gene function extrapolated from C8J_0356
FT                   (CP000814.1) after blastn alignment (98.97 percent identity
FT                   over a 681 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31537.1"
FT                   /translation="MKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIE
FT                   ELKKVDDFKIFLDLKIHDIPNTMADACEEISKLGVDMINIHASAGKIAMQEVMTRLSKF
FT                   SKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENRLDGMVCSVFESKIIKE
FT                   HTQRNFLTLTPGIRPFGEKNDDQKRVANLTMARENLSDFIVVGRPIYKDNNPRKICEKI
FT                   LQEI"
FT   gene            complement(382133..382531)
FT                   /locus_tag="C1336_000060119"
FT                   /note="C1336_000060119 identified by Glimmer3 with a raw
FT                   score of 14.45."
FT   CDS             complement(382133..382531)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060119"
FT                   /product="transcription antitermination factor NusB"
FT                   /note="C1336_000060119 identified by Glimmer3 with a raw
FT                   score of 14.45. Gene function extrapolated from
FT                   CJJ81176_0405 (CP000538.1) after blastn alignment (98.75
FT                   percent identity over a 399 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31538.1"
FT                   /translation="MATRHQVRQSVISLLYAFELNSQNNVFVDEILDEKKIRNEQKNFT
FT                   LNLYHGILDNLNNIDETLNSFLNDNQITALGHVERAILRLGAYELLFTDTPSAIVINEA
FT                   IELAKELANDNSPKFINGVLDALIKAKK"
FT   gene            complement(382531..382995)
FT                   /locus_tag="C1336_000060120"
FT                   /note="C1336_000060120 identified by Glimmer3 with a raw
FT                   score of 14.57."
FT   CDS             complement(382531..382995)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060120"
FT                   /product="6,7-dimethyl-8-ribityllumazine synthase"
FT                   /note="C1336_000060120 identified by Glimmer3 with a raw
FT                   score of 14.57. Gene function extrapolated from Cj0383c
FT                   (AL111168.1) after blastn alignment (99.57 percent identity
FT                   over a 465 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31539.1"
FT                   /translation="MNIIEGKLNLDSNTKIAIINARFNHIITDRLVEGAKDAFLRHGGK
FT                   EENLSLILVPGAFELPYALKKAIESKKFDAICCVGAVIRGSTPHFDYVSAETTKGIANV
FT                   SLNHNIPVSFGVLTTDTIEQAIERAGSKAGNKGFEAMTTVIEMLNLSKEL"
FT   gene            complement(382992..383807)
FT                   /locus_tag="C1336_000060121"
FT                   /note="C1336_000060121 identified by Glimmer3 with a raw
FT                   score of 14.12."
FT   CDS             complement(382992..383807)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060121"
FT                   /product="3-deoxy-8-phosphooctulonate synthase"
FT                   /note="C1336_000060121 identified by Glimmer3 with a raw
FT                   score of 14.12. Gene function extrapolated from CJE0433
FT                   (CP000025.1) after blastn alignment (99.01 percent identity
FT                   over a 806 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31540.1"
FT                   /translation="MKKMILIAGPCVIESKDLIFKVAEQLKNFNENPNIEFYFKSSFDK
FT                   ANRTSINSFRGPGLEEGLKILQSVKDEFGMKILTDIHESNQANPVSEVADVLQIPAFLC
FT                   RQTDLLVAAAKTKAKVNIKKGQFLNPSDIKYSVKKVLQTRGIEDEGYEAAQKNGVFVAE
FT                   RGASFGYGNLVVDMRSLVIMREFAPVIFDATHSVQMPGAAGGSSGGKSEFVEPLARAAA
FT                   AVGIDGFFFETHINPCEALCDGPNMLNLTRLKNCVNTLLEIQNIIKENK"
FT   gene            complement(383804..384736)
FT                   /locus_tag="C1336_000060122"
FT                   /note="C1336_000060122 identified by Glimmer3 with a raw
FT                   score of 11.82."
FT   CDS             complement(383804..384736)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060122"
FT                   /product="integral membrane protein"
FT                   /note="C1336_000060122 identified by Glimmer3 with a raw
FT                   score of 11.82. Gene function extrapolated from C8J_0360
FT                   (CP000814.1) after blastn alignment (99.13 percent identity
FT                   over a 923 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31541.1"
FT                   /translation="MLKIIKHNLGIYFMILACLDFALMGACAKILSKEMSSIEIMFFRN
FT                   IIGIFFIVYLLKRSKAHKEGGHFWLLVFRGVVGTLSLYMFFYNVSNITLGGAFAFQKTA
FT                   PIFITLIAFVVFKENIGIKGWIGILIAFGGVLLIAQPWAHNLNHSGFDLKNSVIGITSG
FT                   FLAALALTSVRELRKSYTTEQIAFSFILLGTLMPLISMISAEFFEPQHLDSLHLDFILA
FT                   PFVMPSLTAWLIIAIMGTLGTIYQIHVTKAYGIAKQAGVVAGVSYLDVVFSMIVGIILG
FT                   DNLPSTMVFLGIIGIIFGGLILVKNKGKK"
FT   gene            384837..386219
FT                   /locus_tag="C1336_000060123"
FT                   /note="C1336_000060123 identified by Glimmer3 with a raw
FT                   score of 12.86."
FT   CDS             384837..386219
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060123"
FT                   /product="putative GTP-binding protein"
FT                   /note="C1336_000060123 identified by Glimmer3 with a raw
FT                   score of 12.86. Gene function extrapolated from Cj0386
FT                   (AL111168.1) after blastn alignment (98.69 percent identity
FT                   over a 1379 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31542.1"
FT                   /translation="MQSIILIGKPNVGKSSLFNRMARQRIAITSDISGTTRDTNKTEIH
FT                   IHSKKAMLIDSGGLDESDELFKNVKKNTLKVAKESDIILYLVDGKLAPDDEDRQFFYSL
FT                   KKLGKPIALVINKVDNKKDEERAWEFANFGVKEIFNLSVTHNVGLDELYEWLGKFLHEE
FT                   FLIPDEEENLEDFLEHYEEGKEFQFKEVDQNHIRVGIVGRVNVGKSSLLNALVKQERSV
FT                   VSSIAGTTIDPVNESVVHKDKVIEFVDTAGIRKRGKIQGLERFALNRTEKILSHSQIAL
FT                   LVLDAHEGFNELDERIAGLVAKHYLGVIIVLNKWDKSEMDFDKTVKELRLDRFKFLAYA
FT                   PVISVSALSGKRVHVLLDKILQIFENFTQKIQTSKLNTLIENATRAHPLPHDYGKLVKI
FT                   YYAVQYDLAPPKIALIMNRPKALHFSYKRYLQNQIRKEFNFEGVPLVIASRKKGSKEND
FT                   ES"
FT   gene            386206..386703
FT                   /locus_tag="C1336_000060124"
FT                   /note="C1336_000060124 identified by Glimmer3 with a raw
FT                   score of 14.87."
FT   CDS             386206..386703
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060124"
FT                   /product="shikimate kinase"
FT                   /note="C1336_000060124 identified by Glimmer3 with a raw
FT                   score of 14.87. Gene function extrapolated from CJE0436
FT                   (CP000025.1) after blastn alignment (97.39 percent identity
FT                   over a 498 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31543.1"
FT                   /translation="MMKVKNIVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFNQ
FT                   KVSEIFVQKGENFFREQEQKMADFFSSCEKTCIATGGGFVNVSNLEKAGFCIYLKADFE
FT                   YLKKRLDENEISKRPLFYDEIKAKKLYNERLSKYEQKANFVLNIENKNIDELLSEIKKV
FT                   IK"
FT   gene            386700..387659
FT                   /locus_tag="C1336_000060125"
FT                   /note="C1336_000060125 identified by Glimmer3 with a raw
FT                   score of 16.53."
FT   CDS             386700..387659
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060125"
FT                   /product="tryptophanyl-tRNA synthetase"
FT                   /note="C1336_000060125 identified by Glimmer3 with a raw
FT                   score of 16.53. Gene function extrapolated from Cj0388
FT                   (AL111168.1) after blastn alignment (99.26 percent identity
FT                   over a 271 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31544.1"
FT                   /translation="MRVLTGLQPSGDLHIGNYFGAIKQMVDAQEKNQMFMFIANYHAMT
FT                   SSQDGEKIQQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLERA
FT                   HSYKDKVAKGLSASHGLFSYPVLMAADILLFDTQIVPVGKDQIQHVEIARDIALKVNNE
FT                   WGEIFTLPEAKVNEEVAVVVGTDGAKMSKSYQNTIDIFSSEKTLKKQISSIVTDSTALE
FT                   DPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKMYLNELVNAYFKEAREKY
FT                   NELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKIGL"
FT   gene            387670..388905
FT                   /locus_tag="C1336_000060126"
FT                   /note="C1336_000060126 identified by Glimmer3 with a raw
FT                   score of 16.29."
FT   CDS             387670..388905
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060126"
FT                   /product="seryl-tRNA synthetase"
FT                   /note="C1336_000060126 identified by Glimmer3 with a raw
FT                   score of 16.29. Gene function extrapolated from
FT                   CJJ81176_0412 (CP000538.1) after blastn alignment (98.65
FT                   percent identity over a 963 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31545.1"
FT                   /translation="MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTAL
FT                   EEFQAFQNKFSKELATTEDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPNIP
FT                   DECVPVGEDEDENVELKEVLNPPSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLK
FT                   NEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLY
FT                   LISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVEL
FT                   VSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQN
FT                   KYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQDKEG
FT                   KIHIPDALKKYF"
FT   gene            388915..391377
FT                   /locus_tag="C1336_000060127"
FT                   /note="C1336_000060127 identified by Glimmer3 with a raw
FT                   score of 12.12."
FT   CDS             388915..391377
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060127"
FT                   /product="putative transmembrane protein"
FT                   /note="C1336_000060127 identified by Glimmer3 with a raw
FT                   score of 12.12. Gene function extrapolated from C8J_0365
FT                   (CP000814.1) after blastn alignment (99.64 percent identity
FT                   over a 278 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31546.1"
FT                   /translation="MAEQEDIILEKPEDGLNQPRLDESLEGFKGQEGQAPEDEEFASLP
FT                   EELPQENSDSGFKFTRESAPEDVLTFEEVESQEPTPWYKDRKFMSLVGLSLGIICILVF
FT                   TLFYLTFSEGKIKPDIIASKPLEQPVVMPDESYKYNDMQRIDSMIQKANALYLKGEVEQ
FT                   ALKVYEQVAVYNESLSNYNLGVSQMNENKFQEAFESFKKAIANGENQSVAAINAAVCAL
FT                   KLNDKEKFRYYIDLAQVYLPKEGKSKLYDYYLSLINYYKGYYPEALQMLQRTDVEPYSD
FT                   VAKYLSAKIYAKMDFDSKAIQQLNSQGNFESSLSLGLLYARIGEYAKAKVALSTAMKIE
FT                   RDFNQSLAALTLVDIKTGNYQDMLARLQNSYDNDKDRYKILDTYKIQVRLNKDLFNIAV
FT                   AQNSFSKDLLKKQKDQFDLLFYFAPYQVFDSKQAALYIKKANVTDFVDDSTDAGIYLNT
FT                   SKALSSTNVKIANIINYALNQKLRLANQEFQKLIKDYPEHSILHYNLALTYAQMQNYEL
FT                   AYKHFSSSYHLNPKNYLAGAFAMFCAKSIDIDTTKLYNEILDNIAADSNFKANMQKSML
FT                   FLVNNNYISMLPYLDETKKDTPLSLIFEAIVAKNNNLNNQVDVKIAKLRSELPEDILTN
FT                   ILYFNSLNSNLNIKEYAQNAQIHFKNLKLDYRSVFGGPSIAREFYVNLMHIAGLLNLER
FT                   QKFKELINVSGAKDEGILQTLAYLDIFAQQYEEAYALYNSLIDDYGAKDTKTLFLAAVA
FT                   AVGANNPNSAIALLQLSKLTDKNNKESKAALGMLYQEVKNYEAAISQYKTLPNNFKSEF
FT                   FTFDINNN"
FT   gene            complement(391408..392043)
FT                   /locus_tag="C1336_000060128"
FT                   /note="C1336_000060128 identified by Glimmer3 with a raw
FT                   score of 13.90."
FT   CDS             complement(391408..392043)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060128"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060128 identified by Glimmer3 with a raw
FT                   score of 13.90. Gene function extrapolated from C8J_0366
FT                   (CP000814.1) after blastn alignment (99.14 percent identity
FT                   over a 463 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31547.1"
FT                   /translation="MQVNTFSNIASMAQTQVSNKKADDAKENTKDKNVQSANSSKDVDK
FT                   NTLEKLNALGGKGITQIYLVQFQQQTMNAVIGSSNAQTGLDSLLNGANLNTAKSILKNI
FT                   DFASLGYSGKNPLDMNTDELQQLVSEDGFFGVENTASRIADFVIKGGGDDVEKLKKGLE
FT                   GMKKGFEQAEKMWGGELPQISQNTIDAALKKVSDRIDELGGKTLDLQA"
FT   gene            complement(392141..393583)
FT                   /locus_tag="C1336_000060129"
FT                   /note="C1336_000060129 identified by Glimmer3 with a raw
FT                   score of 10.91."
FT   CDS             complement(392141..393583)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060129"
FT                   /product="pyruvate kinase"
FT                   /note="C1336_000060129 identified by Glimmer3 with a raw
FT                   score of 10.91. Gene function extrapolated from C8J_0367
FT                   (CP000814.1) after blastn alignment (98.95 percent identity
FT                   over a 1424 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31548.1"
FT                   /translation="MLKKTKIVATVGPASEKEEILRQMIINGVNVFRLNFSHGTHKYHK
FT                   KNLDTIRRVAKELHTRIGILQDISGPKIRTGELKEPFELKKGDRIDFYRETILGEKIAQ
FT                   NHYKISINQKSILDMLKIDEYIYLYDGSIRAKVVNIDDQKIETIIENDGFLNSNKGINF
FT                   PNTKINIDVITQKDKNDLLWGIKNEVDFLAISFVQNAHDIDEVREILAQNNAKISIFAK
FT                   IEKFDAVENIDEIIKSSDGIMVARGDLGIEVPYYKVPNIQKEIIQKANNASKPVITATQ
FT                   MLFSLAKSKTATRAEISDVANAVLDGTDAVMLSEESAVGIDPANAVDIMCQTIIETEKR
FT                   YPYNKFNDFNDLDNTDKIMRSSAHLATDLNSDAIFSLTSSGKSAIKIARYRPNIEIIAV
FT                   GHSEKTLNSLSIVWGVNPAILVNKSNELTELLKDSVRSSVEKGFMDEDKCYLLTAGFPT
FT                   GVEGTSNLIRILNKEQIAYYLQ"
FT   gene            complement(393632..394978)
FT                   /locus_tag="C1336_000060130"
FT                   /note="C1336_000060130 identified by Glimmer3 with a raw
FT                   score of 11.45."
FT   CDS             complement(393632..394978)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060130"
FT                   /product="malate:quinone oxidoreductase, putative"
FT                   /note="C1336_000060130 identified by Glimmer3 with a raw
FT                   score of 11.45. Gene function extrapolated from CJE0442
FT                   (CP000025.1) after blastn alignment (99.63 percent identity
FT                   over a 541 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31549.1"
FT                   /translation="MSQQEFDVLIIGAGISGAALFYELARYTNIKNIALIEKYNTAATL
FT                   NSKGTSNSQTIHCGDIETNYTLEKARKVKRTADMIVKYGLMQNAQNNFMFSHQKMALAV
FT                   GDIECDYMKKRYEEFKELYPYIKFFDKAKIKQIEPKVVLGEDCNQDRPENICAMGVESG
FT                   EVFTTVDFGKMSINLIEQAQKQNKNTFVAFNQEIIHIEKKDDIFILKTSNHQEYHAKSV
FT                   VVNAGAHSLYLAHKMNLGMDKSCWPVAGSFYLTKQKLLNGKVYMVQNPKLPFAALHGDP
FT                   DLLADMNTRFGPTALVIPKLERYHGLKSVPEFFEALKLDKTVLKVTFNMFKDATIRNYI
FT                   FYNYLFELPFVDKSLFVKDAKKIVPSLKASDIYYAKGFGGVRPQVIDKTKGELMLGEAS
FT                   ITETPGIIFNMTPSPGATSCLGNAERDAKLVCNYLGMEFNEDKFSSELL"
FT   gene            complement(395097..395726)
FT                   /locus_tag="C1336_000060131"
FT                   /note="C1336_000060131 identified by Glimmer3 with a raw
FT                   score of 10.91."
FT   CDS             complement(395097..395726)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060131"
FT                   /product="putative transcriptional activator"
FT                   /note="C1336_000060131 identified by Glimmer3 with a raw
FT                   score of 10.91. Gene function extrapolated from Cj0394c
FT                   (AL111168.1) after blastn alignment (99.79 percent identity
FT                   over a 469 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31550.1"
FT                   /translation="MLLCDIGNSNANFLDDNKYFTLSIDQFLEFKNEQKIFYINVNEHL
FT                   KEHLKNQKNFINLEPYFLFDTIYQGLGIDRIAACYTIEDGVVVDAGSAITIDIISNSIH
FT                   LGGFILPGIANYKKIYSHISPRLKSEFNTQVSLDAFPQKTMDALSYGVFKGIYLLIKDA
FT                   AQNKKLYFTGGDGQFLANYFDHAIYDKLLIFRGMKKIIKENPNLLY"
FT   gene            complement(395713..396003)
FT                   /locus_tag="C1336_000060132"
FT                   /note="C1336_000060132 identified by Glimmer3 with a raw
FT                   score of 4.19."
FT   CDS             complement(395713..396003)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060132"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060132 identified by Glimmer3 with a raw
FT                   score of 4.19. Gene function extrapolated from C8J_0370
FT                   (CP000814.1) after blastn alignment (99.31 percent identity
FT                   over a 291 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31551.1"
FT                   /translation="MIKILEQTIKALKLNLKPYDLSMLTRKKSYICAKDQNNILFMYTG
FT                   KTKFLMKDALFLENLAQQININNKYFFSMASLCSKAKNHLEMKGFNIYAAL"
FT   gene            complement(396000..396998)
FT                   /locus_tag="C1336_000060133"
FT                   /note="C1336_000060133 identified by Glimmer3 with a raw
FT                   score of 9.62."
FT   CDS             complement(396000..396998)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060133"
FT                   /product="putative lipoprotein"
FT                   /note="C1336_000060133 identified by Glimmer3 with a raw
FT                   score of 9.62. Gene function extrapolated from Cj0396c
FT                   (AL111168.1) after blastn alignment (99.62 percent identity
FT                   over a 783 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31552.1"
FT                   /translation="MKKIFLTLFCLIFLCACGTKRQYFEPKQTDGDLSHNSNLKSKIVD
FT                   WNLVSAKLSNNTAILKNNISIDKFKLPKNYMLLAYQDGEYFTADNNGNLKIFDNSYNEI
FT                   YNFQFDASVVGVASNGDDLALVLANNTIVLANRSLGIKFSQTLTSAPAQDSRTANPIFL
FT                   DNIIVYPTLDGKILILSRNNLQIIKDVVISAENFFNNVIHLSVIGDKLIAATAKKIIVV
FT                   SPARTLYLDADIKDVALSDDGIFILEKDGTIIKTDYNLRKIAEKKFEFAIFVKSNIYNN
FT                   YLYIFEKTGYLIKMNLNLDNAQVFKLSEAVDKISFMGNGKFYYGDKILDLL"
FT   gene            complement(396995..397573)
FT                   /locus_tag="C1336_000060134"
FT                   /note="C1336_000060134 identified by Glimmer3 with a raw
FT                   score of 11.05."
FT   CDS             complement(396995..397573)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060134"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060134 identified by Glimmer3 with a raw
FT                   score of 11.05. Gene function extrapolated from Cj0397c
FT                   (AL111168.1) after blastn alignment (99.65 percent identity
FT                   over a 579 bp alignment). Similar to Cj0397c."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31553.1"
FT                   /translation="MGLKDNLKAVKNELNTEEQFIENFIKGERFIRKYKFYISAVVIIL
FT                   VAWFAGNFIISKINDYKTKEANEIYANLIQDPSNKNLLEQLKNKNTNLYAIFLLKENIN
FT                   DFNNTTLQNELKQIYNNAQTNTLLKNIIALSLGDKSIFLKNYDKLLEAYKLLEQNKIEE
FT                   ANVLLSQIKENSSLNQIAKNLKHYQGITQ"
FT   gene            397717..398001
FT                   /locus_tag="C1336_000060135"
FT                   /note="C1336_000060135 identified by Glimmer3 with a raw
FT                   score of 9.96."
FT   CDS             397717..398001
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060135"
FT                   /product="aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase,
FT                   C subunit"
FT                   /note="C1336_000060135 identified by Glimmer3 with a raw
FT                   score of 9.96. Gene function extrapolated from
FT                   CJJ81176_0421 (CP000538.1) after blastn alignment (99.65
FT                   percent identity over a 285 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31554.1"
FT                   /translation="MQIDEKLLSKLEKLSALQITKNRNETIVQLSEIVNFVEKLNELDL
FT                   DSQEITVSTIKGGAPLRIDEIRNSNVIDEVLDCAPKKQEHFFVVPKIIE"
FT   gene            398068..398631
FT                   /locus_tag="C1336_000060136"
FT                   /note="C1336_000060136 identified by Glimmer3 with a raw
FT                   score of 13.04."
FT   CDS             398068..398631
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060136"
FT                   /product="cvpA family protein"
FT                   /note="C1336_000060136 identified by Glimmer3 with a raw
FT                   score of 13.04. Gene function extrapolated from
FT                   CJJ81176_0422 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 147 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31555.1"
FT                   /translation="MNFYWFDAFILGFTLLLGLKGIINGLIKEIFGLLGIIGGVFIASK
FT                   YATQAAEFIQSTFYKIENQSLAGFAGFLAILIIFWIVCLLAGNFLSKLIKLSGLGFLDR
FT                   IGGFIFGGAKIFLIFAILVFCVARIDFLNDKLDNFAKNSYTLNLLKETGSFIMNQPLTE
FT                   NSLDHANEKLQDIVSDLNNTQKGE"
FT   gene            398633..399106
FT                   /locus_tag="C1336_000060137"
FT                   /note="C1336_000060137 identified by Glimmer3 with a raw
FT                   score of 13.18."
FT   CDS             398633..399106
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060137"
FT                   /product="ferric uptake regulator"
FT                   /note="C1336_000060137 identified by Glimmer3 with a raw
FT                   score of 13.18. Gene function extrapolated from Cj0400
FT                   (AL111168.1) after blastn alignment (99.58 percent identity
FT                   over a 474 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31556.1"
FT                   /translation="MLIENVEYDVLLERFKKILRQGGLKYTKQREVLLKTLYHSDTHYT
FT                   PESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSISFGSAGKKYELANKPHHDHMI
FT                   CKNCGKIIEFENPIIERQQALIAKEHGFKLTGHLMQLYGVCGDCNNQKAKVKI"
FT   gene            399107..400612
FT                   /locus_tag="C1336_000060138"
FT                   /note="C1336_000060138 identified by Glimmer3 with a raw
FT                   score of 14.14."
FT   CDS             399107..400612
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060138"
FT                   /product="lysyl-tRNA synthetase"
FT                   /note="C1336_000060138 identified by Glimmer3 with a raw
FT                   score of 14.14. Gene function extrapolated from C8J_0376
FT                   (CP000814.1) after blastn alignment (98.61 percent identity
FT                   over a 1506 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31557.1"
FT                   /translation="MFDNILEQQRIEKAKELKNLGINPYPHFLEKEMSLKTFKDKFSYI
FT                   LEQVEKRDESVNAVVAGRLKLLRIAGKSIFANIEDEDTNLQIYFSKDSVGEELYAILKK
FT                   NLEVGDIVLVKGFPFVTKTGEFSLHASEVKLATKAIVPLPEKYHGLTDIEQRYRKRYVD
FT                   MIMNAEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGV
FT                   ERFLRIAPELYLKRLVVGGFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHNYKDLM
FT                   DLTEELFALLLDKLNLGKTIEFDGKMIDFSKPFERITYKDALCKYGGLDRDLIEDKEKI
FT                   LTKLKADGFEANEKLELGHLQAELFDNYVEEKLINPTFVIDFPISISPLSRRSDEDSQI
FT                   AERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGM
FT                   PPTAGQGIGIDRLVMLLTNKKSIRDVILFPAMRPLKSELKEKE"
FT   gene            400609..401853
FT                   /locus_tag="C1336_000060139"
FT                   /note="C1336_000060139 identified by Glimmer3 with a raw
FT                   score of 16.36."
FT   CDS             400609..401853
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060139"
FT                   /product="serine hydroxymethyltransferase"
FT                   /note="C1336_000060139 identified by Glimmer3 with a raw
FT                   score of 16.36. Gene function extrapolated from CJE0451
FT                   (CP000025.1) after blastn alignment (98.80 percent identity
FT                   over a 753 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31558.1"
FT                   /translation="MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSI
FT                   LTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQANQGVYAAL
FT                   INPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPK
FT                   LIVCGASAYARVIDFAKFREIADEVGAYLFADIAHIAGLVVAGEHPSPFPHAHVVSSTT
FT                   HKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYA
FT                   KQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKN
FT                   TVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDINNEKLQKNIKQEL
FT                   KKLASNFIIYERAMF"
FT   gene            401850..402395
FT                   /locus_tag="C1336_000060140"
FT                   /note="C1336_000060140 identified by Glimmer3 with a raw
FT                   score of 3.19."
FT   CDS             401850..402395
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060140"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060140 identified by Glimmer3 with a raw
FT                   score of 3.19. Gene function extrapolated from C8J_0378
FT                   (CP000814.1) after blastn alignment (99.45 percent identity
FT                   over a 546 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31559.1"
FT                   /translation="MISPMDMSLIKIIGDHYYIRRDKIVNKITHRGRLFFDKFERVDAP
FT                   LNLNVMREHAAKKIVVAHDLITKDNKVENIVFDYNGFNAERFYHRAQLILREEGFINFT
FT                   AYKTKTPGHLHLYIHKGHTALNEGYSLASKLSMMFASKMPVEWKVFPSMDVPREFNILI
FT                   LPYEVYQKERGSSWSKHM"
FT   gene            402409..403239
FT                   /locus_tag="C1336_000060141"
FT                   /note="C1336_000060141 identified by Glimmer3 with a raw
FT                   score of 13.05."
FT   CDS             402409..403239
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060141"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060141 identified by Glimmer3 with a raw
FT                   score of 13.05. Gene function extrapolated from
FT                   CJJ81176_0428 (CP000538.1) after blastn alignment (99.61
FT                   percent identity over a 254 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31560.1"
FT                   /translation="MENQKNEFDDIILEKSNKSEKVKKILLRVIALVILFLAIMIVMKL
FT                   INGSGDENTQNQSVLPSEPIATQDNNNDTSFESMPITDNTSAEDQFEALRKQFQDEQNT
FT                   TQNTTTSSSNNNDSTNFAMPDQEVPAEPTATTSENTTPQASAPKQEVKQTAKPKEEAKK
FT                   QTAVKKESAKQTPKKEQNANDLFKNVDAKPVHPSGLASGIYVQIFSVSNLDQKSKELAS
FT                   VKQKGYDYKLYKTTVGGKEITKVLIGPFEKADIAAELAKIRKDIAKDAFSFTLK"
FT   gene            403236..404024
FT                   /locus_tag="C1336_000060142"
FT                   /note="C1336_000060142 identified by Glimmer3 with a raw
FT                   score of 15.07."
FT   CDS             403236..404024
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060142"
FT                   /product="shikimate 5-dehydrogenase"
FT                   /note="C1336_000060142 identified by Glimmer3 with a raw
FT                   score of 15.07. Gene function extrapolated from C8J_0380
FT                   (CP000814.1) after blastn alignment (99.11 percent identity
FT                   over a 789 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31561.1"
FT                   /translation="MKFLAVIGDPISHSKSPRMHNNAIKALGLDSIYTRYHLRNANCLR
FT                   EDFFKLGLSGANITLPFKEKALDIADVKDDFARNIGSANTLCLKEDKIYAYNTDALGFL
FT                   EAIKDFDNIKKALILGAGGTALALAYALKQKGVEVYIANRSKERFKDFLAYPTYLYKNL
FT                   QDFDFDLVINSTSAGLKDENLPCDRELLDRILPKAKFAFEVIYGRETPFYRLCKEYHLK
FT                   IKDGLDMLLWQGVFAFELFFEIRDKREMIKNAMQQALILK"
FT   gene            complement(404098..404997)
FT                   /locus_tag="C1336_000060143"
FT                   /note="C1336_000060143 identified by Glimmer3 with a raw
FT                   score of 11.28."
FT   CDS             complement(404098..404997)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060143"
FT                   /product="lipoprotein, putative"
FT                   /note="C1336_000060143 identified by Glimmer3 with a raw
FT                   score of 11.28. Gene function extrapolated from CJE0455
FT                   (CP000025.1) after blastn alignment (99.56 percent identity
FT                   over a 900 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31562.1"
FT                   /translation="MKKYILLASSMLILAACGGTSSNFVNVSMPNFKPQVPTKVEPIDS
FT                   GVSIALEPINIEQNNNYSDYFENSVLKIRIEKEIDLLKRNLEEQIKTIAQLKGYKIVTT
FT                   NPDYTLKSSISIYTEEKNAQKTSNFMSGDYVKSNLGINFKGKIDFIDAHNPQNSTNLSS
FT                   STKLDSLVALNYPIKNDDGVNMFKTTISTVPTQLNKGLEQPAFEIDKSFLAFYKNTLNT
FT                   LYNNLPKATDIGKTIPNTNSGFNSFDGDATFEESLPQTNSNQNNTIENTPTQNIPTNPS
FT                   STNQNNQSKNQDGVEIFE"
FT   gene            405087..405902
FT                   /locus_tag="C1336_000060144"
FT                   /note="C1336_000060144 identified by Glimmer3 with a raw
FT                   score of 11.49."
FT   CDS             405087..405902
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060144"
FT                   /product="prolipoprotein diacylglyceryl transferase"
FT                   /note="C1336_000060144 identified by Glimmer3 with a raw
FT                   score of 11.49. Gene function extrapolated from Cj0407
FT                   (AL111168.1) after blastn alignment (99.63 percent identity
FT                   over a 816 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31563.1"
FT                   /translation="MEFWQHIYSNFNVIAFSIFGLKVHWYGIMYVIALLLALLLAKFFV
FT                   RKFQLDINEKHLDSYFIWVEIGVILGARLGYILIYDANTMYYITHPWQIFNPYINGEFV
FT                   GIRGMSYHGAIIGFLIATLLFCKKYKTNPWIFLDLVALSVPLAYVFGRIGNFLNQELFG
FT                   RITNVPWGIYVDGVLRHPSQLYEAFLEGIVVFIIVYLARFKQSFQGELILVYAGAYSLA
FT                   RFICEFYREPDFGIGFVLWGMSMGQILSFIMFITTLLVYICIKFKKVNI"
FT   gene            405971..406753
FT                   /locus_tag="C1336_000060145"
FT                   /note="C1336_000060145 identified by Glimmer3 with a raw
FT                   score of 8.80."
FT   CDS             405971..406753
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060145"
FT                   /product="fumarate reductase, cytochrome b subunit"
FT                   /note="C1336_000060145 identified by Glimmer3 with a raw
FT                   score of 8.80. Gene function extrapolated from CJE0457
FT                   (CP000025.1) after blastn alignment (99.35 percent identity
FT                   over a 155 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31564.1"
FT                   /translation="MRELIEGYLGKSIEGKKSKMPAKLDFIQSASGLFLGLFMWVHMLF
FT                   VSTILVSEDFFNSVVHFLELKFVYDNPVMSYLTSFLAACVLVVFFVHALLAMRKFPINY
FT                   RQYQILRTHSKKMNHSDTSLWWVQAFTGFIMFFLGSAHLIFIVTNADKISGDMSGDRVV
FT                   SHFMWLFYAVLLVCVELHGSIGLYRLCVKWGWFEGKNVKESRKKLKTAKWIISIFFLVL
FT                   GVLSLAAFIKIGYENYQNQTQTTAMIKNYNGANYEYTI"
FT   gene            406737..408728
FT                   /locus_tag="C1336_000060146"
FT                   /note="C1336_000060146 identified by Glimmer3 with a raw
FT                   score of 11.13."
FT   CDS             406737..408728
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060146"
FT                   /product="fumarate reductase, flavoprotein subunit"
FT                   /note="C1336_000060146 identified by Glimmer3 with a raw
FT                   score of 11.13. Gene function extrapolated from
FT                   CJJ81176_0433 (CP000538.1) after blastn alignment (98.54
FT                   percent identity over a 1992 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31565.1"
FT                   /translation="MNIQYSDALVIGGGLAGLRAAIEVAKSGQSVTLLSICPVKRSHSA
FT                   AVQGGMQASLANGAKGEGDNEDLHFADTVKGSDWGCDQEVARMFAQTAPKAVRELAAWG
FT                   VPWTRVTKGPRTVVINAQKTVIEEKEEAHGLINARDFGGTKKWRTCYIADATGHCMLYG
FT                   VANEAIKHQVKIIDRMEAVRIIHDGKKCLGVIARDLTNGQLIAYIARGTMIATGGYGRI
FT                   YKQTTNAVICEGTGAAIALETGLCRLSNMEAVQFHPTPIVPSGILLTEGCRGDGGILRD
FT                   VDGYRFMPDYEPEKKELASRDVVSRRMMEHIRKGKGVKSPYGDHLWLDISILGRAHVEK
FT                   NLRDVQDICKTFNGIDPADEGPKGWAPVLPMQHYSMGGIRTKPTGESQWLNGLFACGEA
FT                   ACWDMHGFNRLGGNSCAETVVAGMIVGDYFADYCKNNGEVIDTNVVKDFLTKEYQYLKS
FT                   LVDKEGKYNVFEIKNRMKEIMWDKVAIFRTGEGLKEAVDELEKLYKDSQDVKVHCKELD
FT                   CANPELEEAYRVPRMLKIALCVAYGALLRTESRGAHYREDYPKRDDLNWMKRTNTFWVE
FT                   GETLPRIEYEELDIMKMEIPPAFRGYGAKGNIIENPLSEKRQAEVDAIREKMEAEGKGR
FT                   YEIQNALMPYELQAKYKAPNQRIGVDYE"
FT   gene            408721..409446
FT                   /locus_tag="C1336_000060147"
FT                   /note="C1336_000060147 identified by Glimmer3 with a raw
FT                   score of 13.08."
FT   CDS             408721..409446
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060147"
FT                   /product="fumarate reductase, iron-sulfur protein subunit"
FT                   /note="C1336_000060147 identified by Glimmer3 with a raw
FT                   score of 13.08. Gene function extrapolated from
FT                   CJJ81176_0434 (CP000538.1) after blastn alignment (98.35
FT                   percent identity over a 726 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31566.1"
FT                   /translation="MSRKLTIKAFKYNPLSKISKPHFVTYELEETPFMTVFVCLTLIRE
FT                   KMDADLSFDFVCRAGICGSCAMMINGVPKLACKTLTKDYPDGVIELMPMPAFRHIKDLS
FT                   VNTGEWFEDMCKRVESWVHNEKETDISKLEERIEPEVADETFELDRCIECGICVASCAT
FT                   KLMRPNFIAATGLLRTARYLQDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNCPKEL
FT                   PLQSKIAYMRRQLVAQRNK"
FT   gene            409474..411660
FT                   /locus_tag="C1336_000060148"
FT                   /note="C1336_000060148 identified by Glimmer3 with a raw
FT                   score of 15.98."
FT   CDS             409474..411660
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060148"
FT                   /product="putative ATP/GTP binding protein"
FT                   /note="C1336_000060148 identified by Glimmer3 with a raw
FT                   score of 15.98. Gene function extrapolated from C8J_0386
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 72 bp alignment).; overlaps another CDS
FT                   with the same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31567.1"
FT                   /translation="MKELFQKIWQNELQFLNFDAKFQNKSKLDTAECAIILSVNKDNYE
FT                   RYFLLKEFQELCKKIDLRVDIFSIQNAQICILNLFKSGFISKQDLLKALKILEKISKNT
FT                   EMLDFISQEKVQSIDQKALFQNDFKELNTINLELQKLSFDENLKSRLQKTLEKFQNLEF
FT                   NIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGKSEEAKIYFWDKKEWQN
FT                   ILESSHFNADLKEFIDKLDKSVNIEDFIKDKPLIQNIALCELKNFSSAKNKISALIKKI
FT                   EIKSHLDFLKNNISIVDTPGLDDVVVQREIVTNEYLRESDFLIHLMNASQSLTQKDADF
FT                   LVHCLLNSRLSKFLIVLTKADLLSKKDLEEVIVYTKESLKSRLVDLDENLVEKIDFLCV
FT                   SAKMASDFYKGLAPKESLQKSGMQEFENYLFNELYAGEKSKIALRAYKKELHLELKNIL
FT                   SEYEMQNRLIKENKQGVSEENQKLLLELQKQNTLLKEAQDEISNSIAKLKNIDSGIDNL
FT                   VLLLAKKLKERLIDEFKYLKNNAQKLNLSRILNIVDITTKDGINDILREIKFENIKKIE
FT                   ELKTNLSLKYDFLKDDFDNGFEGFKDGISKNIDSIFQSEKFALLRLKIEKLSNLKSDLY
FT                   ELETNLDTVIFDTFKEFKMSEILNSLNINGVFFEFLNDKLKHYEKNQKSKLESLEKVLQ
FT                   SLKNQDINILNSFEENLEKIEKLKQLEMGLLNAD"
FT                   /artificial_location="low-quality sequence region"
FT   gene            411650..413479
FT                   /locus_tag="C1336_000060149"
FT                   /note="C1336_000060149 identified by Glimmer3 with a raw
FT                   score of 15.25."
FT   CDS             411650..413479
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060149"
FT                   /product="putative ATP/GTP binding protein"
FT                   /note="C1336_000060149 identified by Glimmer3 with a raw
FT                   score of 15.25. Gene function extrapolated from Cj0412
FT                   (AL111168.1) after blastn alignment (99.69 percent identity
FT                   over a 325 bp alignment).; overlaps another CDS with the
FT                   same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31568.1"
FT                   /translation="MQINLLNDFIKAYENTYSVSFDDSFKGRIQKLCKELNEPFMHASY
FT                   ALENELKELVFSLDKNVNIAIIGQFSSGKSSLLNLILGCDCLPTGVVPVTFKPTFLRYA
FT                   KEYFLRVEFEDGSDIITNIEKLAFYTDQRNEVKQAKSLHIFAPIPLLEKITLVDTPGLN
FT                   ANENDTLTTLDELKNIHGAIWLSLIDNAGKKSEEDAIKANLELLGENSICVLNQKDKLN
FT                   TEELDNVLNYAKSVFLKYFDKLIAISCKEAKDEQSYEKSNFQSLLDFLTQLDTTALKEK
FT                   FVKRKILNLCEILEDENQLFVGIFDRLLNQFQSYEKHLLLAYENFLKEIEILNHQILEQ
FT                   LKSISERISSEIFASVKEKDAYFYKESKGFLKKDLYTRYDYKAPYISSDDAFLAMFYNS
FT                   DVMSKEFKKIKNELYKSFEEIKMKLKDFINILEREILLFKAEFSNIQKDHIFQSDKNFS
FT                   ELRAFCNASDEYFLKDFKELLFKSILELDLFFEKLNLKAFTNYENATKLSLAFFSRKIN
FT                   ESRVLYELDSSEFVLFYPKKSEIYERVLNELNVYEFEALLINKPILIKIAKNFLEQSQN
FT                   LIQEKNKFLDLKKAELQKRRAQILNVRENIKED"
FT                   /artificial_location="low-quality sequence region"
FT   gene            413479..414183
FT                   /locus_tag="C1336_000060150"
FT                   /note="C1336_000060150 identified by Glimmer3 with a raw
FT                   score of 16.12."
FT   CDS             413479..414183
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060150"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000060150 identified by Glimmer3 with a raw
FT                   score of 16.12. Gene function extrapolated from Cj0413
FT                   (AL111168.1) after blastn alignment (97.91 percent identity
FT                   over a 671 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31569.1"
FT                   /translation="MRIFLALFLFFNSLFALSELEEGLKLYEANKFDKAYEIFKNLCEK
FT                   DISKACFSLAFMHESAKGVSKDLNQAYKFYDKACKLGLANACSNMALLLQNQGYENEAL
FT                   LAFNKACALGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDKGEL
FT                   VKASVKSALAFYSKSCTLGFSEACYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEACAA
FT                   YKELNSKDIELY"
FT   gene            414319..415047
FT                   /locus_tag="C1336_000060151"
FT                   /note="C1336_000060151 identified by Glimmer3 with a raw
FT                   score of 17.08."
FT   CDS             414319..415047
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060151"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060151 identified by Glimmer3 with a raw
FT                   score of 17.08. Gene function extrapolated from
FT                   CJJ81176_0438 (CP000538.1) after blastn alignment (99.73
FT                   percent identity over a 729 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31570.1"
FT                   /translation="MQDNIIDRRSFFKLGLLGGSVVAASTIGGGAVLKAAELTHSHQAS
FT                   QGKSNKIRGRMFFQTQTEFDTLSAACERIYPKDEQGEGAIGLGVPYFIDNQLASAYGYN
FT                   DREYMQGPFMEGKAEQGYQTPMQRKDIFLEGVHALEENAQKRYKKSFSLLKGGDQDKIL
FT                   SDFEKGKIQTTGFKSSYFFTLLRDMTVAGVLADPIYGGNDNKNGWRMMQYPGAQMSYVD
FT                   KIASDEFFNIEPMGLADMES"
FT   gene            415112..416770
FT                   /locus_tag="C1336_000060152"
FT                   /note="C1336_000060152 identified by Glimmer3 with a raw
FT                   score of 11.89."
FT   CDS             415112..416770
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060152"
FT                   /product="oxidoreductase, putative"
FT                   /note="C1336_000060152 identified by Glimmer3 with a raw
FT                   score of 11.89. Gene function extrapolated from C8J_0390
FT                   (CP000814.1) after blastn alignment (99.16 percent identity
FT                   over a 1659 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31571.1"
FT                   /translation="MAAELTKAGLNVLSLERGHMQSTENFNFIHDEWRYGINYGLMQDC
FT                   SKDTVTFRHDPSGLALPYRKMGSFLLGNNVGGAGVHWNGWTFRFMPYDFEIQTLSKQRY
FT                   GNKLGNDYTLQDWGVTYKDMEPYYDRFEKTCGVSGEPNPLAEKMGAFRSSPYPQEPLEN
FT                   TKMLKRFESAAKSSNLHTYRLPASNSKGGYTNPDGQDLAPCQYCAYCERFGCEYGAKAS
FT                   PLNTVIPKAMSTGKYTIRTYSNVTQILKKDGKVTGVKFVDIRTMKEYIQPADIVVLTSY
FT                   MFNNAKLLMVSNIGEQYDPKTGKGTLGRNYCYQMNMGTTAFFDEQFNTFMGSGALGTTS
FT                   DDFNGDNFDHSKEKFLHGAMIYSVQLGTRPIQSAPLPAGAPTWGAEFKKALNYNFTRAI
FT                   TVAGQGASLPHKNNYLSLDPTYKDAFGMPLLRLTYNFTDQDRALHKFITDKTAEVAKRM
FT                   QGVKSIKKGAYLKDYSVVPYQSTHNTGGTTMGADRETSVVNTYLQHWDADNLFVVGAGN
FT                   FQHNSGYNPTDTVGALAYRCAEGILKYHKSGKSLA"
FT   gene            416857..417987
FT                   /locus_tag="C1336_000060153"
FT                   /note="C1336_000060153 identified by Glimmer3 with a raw
FT                   score of 11.45."
FT   CDS             416857..417987
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060153"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060153 identified by Glimmer3 with a raw
FT                   score of 11.45. Gene function extrapolated from CJE0466
FT                   (CP000025.1) after blastn alignment (98.51 percent identity
FT                   over a 404 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31572.1"
FT                   /translation="MINGVNLNYNYNTSNFKQDKNIDFKINKHGVAVITGEGALPYRGK
FT                   KFEYNPKIFGLDESISKKDMQEFNNFMKSNALKDPNKIEKSSLKNLGEDDSWDIRDEDI
FT                   KLMNFSSYSQMFNLGSDITRKASNFRNEFNKLLQEDLSLDEFKNKYMDFKQRHDEFVKE
FT                   FEIAMGDKMLLVNNNDNTNNKKAVLKNDDDAYYESIIKKFGDLEKFKEENGYNGSPDVK
FT                   EVENSLYKRYMEDKLSKDEIKILNKFGTDYLTEGVDWSALHKRKVDLLKTLTSMNEFEK
FT                   IWGAERAQREKQFFNELGKPLTQEDIDRFLANKNNQKEDKETFKPIQAESKNKETYKDE
FT                   VKTNFWQQFLKVQQENGMDVLEILEILNKQGIDIKA"
FT   gene            418023..418235
FT                   /locus_tag="C1336_000060154"
FT                   /note="C1336_000060154 identified by Glimmer3 with a raw
FT                   score of 10.91."
FT   CDS             418023..418235
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060154"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060154 identified by Glimmer3 with a raw
FT                   score of 10.91. Gene function extrapolated from C8J_0392
FT                   (CP000814.1) after blastn alignment (98.92 percent identity
FT                   over a 93 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31573.1"
FT                   /translation="MLNILHANSNHRFHKCMPKEVHQIYDTLKLMEQEEDKQKVEAEAK
FT                   KEEQSNSTNTDKADNKKDKFLDMSV"
FT   gene            complement(418299..419003)
FT                   /locus_tag="C1336_000060155"
FT                   /note="C1336_000060155 identified by Glimmer3 with a raw
FT                   score of 16.43."
FT   CDS             complement(418299..419003)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060155"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060155 identified by Glimmer3 with a raw
FT                   score of 16.43. Gene function extrapolated from
FT                   CJJ81176_0441 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 340 bp alignment) - for clarity,
FT                   the original product name 'conserved domain protein' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31574.1"
FT                   /translation="MQISSSYNSYDYYSSKPSFDKTNQSDSTQKDEKNLSENKDDKEKN
FT                   GEQTQMVNGVELSQKEVAQVRELQSIDRNVKAHEAAHQAAGGGLAGAASFTYTRGPDNQ
FT                   MYATAGEVPISMQKGNTPEETIANARQIAAAAMAPADPSPQDYKVAANATKMEFEARAE
FT                   AMKLKAEEAKEKEEENKEKDDKNSENSLEKTDKDSKNNDKNSNFDKDFKNFVARTYQQN
FT                   SQNNDIKFNIAS"
FT   gene            419110..419472
FT                   /locus_tag="C1336_000060156"
FT                   /note="C1336_000060156 identified by Glimmer3 with a raw
FT                   score of 17.67."
FT   CDS             419110..419472
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060156"
FT                   /product="HIT family protein"
FT                   /note="C1336_000060156 identified by Glimmer3 with a raw
FT                   score of 17.67. Gene function extrapolated from C8J_0394
FT                   (CP000814.1) after blastn alignment (99.72 percent identity
FT                   over a 363 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31575.1"
FT                   /translation="MIYENDSIYIEKEEAQVPWLKIFTKEIYKEFSDCPLELQKELFEK
FT                   ILLCEKAMIEFYKPEKINIASFANYVPRVHFHVMARFKEDAFFPECMWGKQQREAIKLD
FT                   LPKFEEFVKFLNSKIF"
FT   gene            419546..420118
FT                   /locus_tag="C1336_000060157"
FT                   /note="C1336_000060157 identified by Glimmer3 with a raw
FT                   score of 15.60."
FT   CDS             419546..420118
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060157"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000060157 identified by Glimmer3 with a raw
FT                   score of 15.60. Gene function extrapolated from C8J_0395
FT                   (CP000814.1) after blastn alignment (98.60 percent identity
FT                   over a 215 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31576.1"
FT                   /translation="MKKVLLSSLVAVSLLSIGLFAKEYTLDKAHTDVGFKIKHLQISNV
FT                   KGNFKDYSAVIDFDPASAEFKKLDATIKIASVNTENQTRDNHLQQDDFFKAKKYPDMTF
FT                   TMKKYEKIDNEKGKMTGTLTIAGVSKDIVLDTEIGGVAKGKDGKEKIGFSLNGKIKRSD
FT                   FKFATSTSTITLSDDINLNIEVEANEK"
FT   gene            complement(420123..421079)
FT                   /locus_tag="C1336_000060158"
FT                   /note="C1336_000060158 identified by Glimmer3 with a raw
FT                   score of 9.23."
FT   CDS             complement(420123..421079)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060158"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060158 identified by Glimmer3 with a raw
FT                   score of 9.23. Gene function extrapolated from C8J_0396
FT                   (CP000814.1) after blastn alignment (99.15 percent identity
FT                   over a 117 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31577.1"
FT                   /translation="MFLLDFLISLSFIFEISALVLSFYFKNSKIFFLTLVLLGAKLPYF
FT                   YTSFFQANLFVALFLPMVFTIFCLGKHHVLILNKKNIASITTLIFIGILSIILPRNTTF
FT                   NSAGLEFHFIALDFFKPVSELGFLFFLVGLILIFIKTFKTKEYYLIIAFFAAYFQFLFQ
FT                   EGAGIRYFEFASLVFCFYLLNHAYRLAFFDILTKLPNEKSLTRFTKGKNNYIIALLHFN
FT                   ELKDTKESYAKLILKQIAKILKRFRAKIFIVDNDFVLIFNDKNQALNHLAFLESTLKNT
FT                   EFNLENENFKPDFKLIWQESEENLDKNLQSLRARLLD"
FT   gene            complement(421140..421349)
FT                   /locus_tag="C1336_000060159"
FT                   /note="C1336_000060159 identified by Glimmer3 with a raw
FT                   score of 7.93."
FT   CDS             complement(421140..421349)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060159"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060159 identified by Glimmer3 with a raw
FT                   score of 7.93. Gene function extrapolated from CJE0471
FT                   (CP000025.1) after blastn alignment (99.52 percent identity
FT                   over a 210 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31578.1"
FT                   /translation="MTKKSKRDMAYELDIDVSTLYNWRKYKPNLYRIVMLGFKFDELLE
FT                   NSKKTHEELLHIEQTIQDEIAKFK"
FT   gene            421517..421636
FT                   /locus_tag="C1336_000060160"
FT                   /note="C1336_000060160 identified by Glimmer3 with a raw
FT                   score of 11.90."
FT   CDS             421517..421636
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060160"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060160 identified by Glimmer3 with a raw
FT                   score of 11.90. Gene function extrapolated from CJE0472
FT                   (CP000025.1) after blastn alignment (97.52 percent identity
FT                   over a 121 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31579.1"
FT                   /translation="MDFNSVLSNIGDKLPRDGLAAITLKEKFERLSEERKKMC"
FT   gene            421630..421806
FT                   /locus_tag="C1336_000060161"
FT                   /note="C1336_000060161 identified by Glimmer3 with a raw
FT                   score of 9.17."
FT   CDS             421630..421806
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060161"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060161 identified by Glimmer3 with a raw
FT                   score of 9.17. Gene function extrapolated from CJE0472
FT                   (CP000025.1) after blastn alignment (98.29 percent identity
FT                   over a 175 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31580.1"
FT                   /translation="MLNRLPMLKLKSPALVFWVGTFLFGPFGVGRFMIGDMVLGFVRLA
FT                   FVIIPNNFLYCCK"
FT   gene            421991..422251
FT                   /locus_tag="C1336_000060162"
FT                   /note="C1336_000060162 identified by Glimmer3 with a raw
FT                   score of 10.85."
FT   CDS             421991..422251
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060162"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060162 identified by Glimmer3 with a raw
FT                   score of 10.85. Gene function extrapolated from CJE0473
FT                   (CP000025.1) after blastn alignment (95.79 percent identity
FT                   over a 261 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31581.1"
FT                   /translation="MSEKYTPFEVEPTLFYEKDTYKIVAGKAYTNKDEKFCIGLKSNGF
FT                   PVNSYLIFPPQLNLDLLKSLLGEDGAKNDEIIEFIKIIMEK"
FT   gene            422251..422784
FT                   /locus_tag="C1336_000060163"
FT                   /note="C1336_000060163 identified by Glimmer3 with a raw
FT                   score of 12.33."
FT   CDS             422251..422784
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060163"
FT                   /product="putative lipoprotein"
FT                   /note="C1336_000060163 identified by Glimmer3 with a raw
FT                   score of 12.33. Gene function extrapolated from
FT                   JJD26997_1530 (CP000768.1) after blastn alignment (96.26
FT                   percent identity over a 294 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31582.1"
FT                   /translation="MKNILLSLMLVFLFAGCFNNKPKCDDEDVKLTLKSILDDDEWVYV
FT                   EYGLNEQSLRALRINSNGMDMRDLEAALSTDTLGVLRAHFKPLLDLKDYANEVVYTSFE
FT                   SFITKDSKDKKTSFCMASLKFTYPQMPNEMREKYSRGALKGILFDGGEYETQISYSARF
FT                   SDDKKQVFVELLDY"
FT   gene            422908..424485
FT                   /locus_tag="C1336_000060164"
FT                   /note="C1336_000060164 identified by Glimmer3 with a raw
FT                   score of 15.70."
FT   CDS             422908..424485
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060164"
FT                   /product="ABC transporter, ATP-binding protein"
FT                   /note="C1336_000060164 identified by Glimmer3 with a raw
FT                   score of 15.70. Gene function extrapolated from CJE0475
FT                   (CP000025.1) after blastn alignment (97.34 percent identity
FT                   over a 1578 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31583.1"
FT                   /translation="MVEVKNLTMRFANQLLFENVNLKLVRGQRYGLIGANGAGKSTFLK
FT                   ILSGEIESSSGEIVFDEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYEALKEKEKLYM
FT                   SEEFTDEINERLGELEIITAEEDPNYDCETRCEKILSSLKIKDFDALMSTLQSADKFKV
FT                   LLAQVLFLGADVLFLDEPTNNLDLEAISWLENELLRHEGTLVVISHDRHFLNKICTRIL
FT                   DVDFKQIRDFAGNYDDWYMASTLLAKQAELKRDKTLKEREELENFIRRFSANASKAKQA
FT                   TSRAKALEKLELEEIKISSRRDPSIVFRTNREIGNEVLEFKGIGKAYDKQLFSNLELKI
FT                   EKNDKIALIGANGVGKSTLAKIIAHAISPDSGSIHLGATIELGYFPQDTSNLICENLKL
FT                   YEWLMSEKFKDLDEIRKCLGRMLFSGSDQEKMAASLSGGEKHRLMLSRLMLERPNFLLL
FT                   DEPDNHLDLESIIALGEALYNFKGVVLCISHDRELVSAFANRIWHLENGKLTDFRGTYQ
FT                   EFLGENDG"
FT   gene            424478..424810
FT                   /locus_tag="C1336_000060165"
FT                   /note="C1336_000060165 identified by Glimmer3 with a raw
FT                   score of 13.40."
FT   CDS             424478..424810
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060165"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060165 identified by Glimmer3 with a raw
FT                   score of 13.40. Gene function extrapolated from CJE0476
FT                   (CP000025.1) after blastn alignment (97.89 percent identity
FT                   over a 331 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31584.1"
FT                   /translation="MAKFRIQYSAGFGHYTQNHKGFGPTIYIEEVVEFDNGKDYFDYID
FT                   FYKTYSKSDDTYFHISFLEDRPLSDKEITIRNEYRKMRDENCKKAKEEFIANNELDVEH
FT                   LPTHHD"
FT   gene            424885..425268
FT                   /locus_tag="C1336_000060166"
FT                   /note="C1336_000060166 identified by Glimmer3 with a raw
FT                   score of 9.62."
FT   CDS             424885..425268
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060166"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060166 identified by Glimmer3 with a raw
FT                   score of 9.62. Gene function extrapolated from CJE0477
FT                   (CP000025.1) after blastn alignment (98.70 percent identity
FT                   over a 384 bp alignment) - for clarity, the original
FT                   product name 'conserved domain protein' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31585.1"
FT                   /translation="MQVNYRTISSYEYDAISGQYKQVNKQVKDYSSSGNSDFMDILNKA
FT                   DEKSSGDALNSSNSFQSNAQNSNSNLSNYAQMSNVYAYRFRQNEGELSMRAQSASVHND
FT                   LAQQGANEQSKNNTLLNDLLNAI"
FT   gene            complement(425312..425896)
FT                   /locus_tag="C1336_000060167"
FT                   /note="C1336_000060167 identified by Glimmer3 with a raw
FT                   score of 12.86."
FT   CDS             complement(425312..425896)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060167"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060167 identified by Glimmer3 with a raw
FT                   score of 12.86. Gene function extrapolated from C8J_0404
FT                   (CP000814.1) after blastn alignment (99.22 percent identity
FT                   over a 387 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31586.1"
FT                   /translation="MQTIDQIFQTQINIKKSTFLSFLCPFKDFKFLIETLKKEHPKAVH
FT                   FVYAYRVLNDFNQIVEDKSDDGEPKGTSGMPTLNVLRGYDLINVALITVRYFGGIKLGT
FT                   GGLVRAYSDAANAVINNSSLLSFELKKNITIAIDLKNLNRFEHFLKTYSFNFTKDFKDC
FT                   KAILHIKLNEKEEQEFKIFCKNFAPFEIEKL"
FT   gene            426024..427250
FT                   /locus_tag="C1336_000060168"
FT                   /note="C1336_000060168 identified by Glimmer3 with a raw
FT                   score of 8.49."
FT   CDS             426024..427250
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060168"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060168 identified by Glimmer3 with a raw
FT                   score of 8.49. Gene function extrapolated from
FT                   CJJ81176_0450 (CP000538.1) after blastn alignment (99.35
FT                   percent identity over a 154 bp alignment) - for clarity,
FT                   the original product name 'membrane protein, putative' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31587.1"
FT                   /translation="MEKIKNYKLIIILLSLDLLALLYGISTLSISADEADIYFDEQGKS
FT                   LIFSHSLLYYISHFGTFIFGQNDFGLRLPFLFFHFSSCLLLYLLALKYTKTKIDAFFSL
FT                   LLFVLLPGTVASALLVNAASLVIFLTLAILCAYEYEKKWLFYILLIIVLFVDKSFNILF
FT                   LTFFFFGIYKRNAILFTLSLILFGASISFYGFDTGGRPRGYFLDTLGIFAACFSPLVFV
FT                   YFFYTIYRLTFQKYKNLLWFLMSVTFVFCLLLSLRQKLFLDDFLPFCVICTPLLIKTLM
FT                   QSYRVRLPVFRLRYKIFIECSIIFLIFCYFLIVANQLLYYFINNPNRHFANNYHFAKEL
FT                   ALELKKQDVLELATAPSLQKRLRFYGIKNSNKFYLKALKQADRHDMDKKIVKVKLGKYE
FT                   KVYQILNYD"
FT   gene            427264..427980
FT                   /locus_tag="C1336_000060169"
FT                   /note="C1336_000060169 identified by Glimmer3 with a raw
FT                   score of 7.15."
FT   CDS             427264..427980
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000060169"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000060169 identified by Glimmer3 with a raw
FT                   score of 7.15. Gene function extrapolated from
FT                   CJJ81176_0451 (CP000538.1) after blastn alignment (99.41
FT                   percent identity over a 683 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31588.1"
FT                   /translation="MEFVFIILILGIVFNLGSLYLKKDNLLEGAIQILNDIQYTQSLAM
FT                   MQEGIRVDELAIAKREWFKSKWQIYFIKSAATGYDQTYTIFLDKNGDGNANLGKTEINI
FT                   DREIAVDVINHNKLMNSGQSGVISKDDEKTTQRFNLTKRFGIEKVEFKGSCSGFTRLVF
FT                   DEMGRVYSPLKNANYAYEKTLAKNNSDCIIRLLSKKHALCIVVDTLSGYAYIPDFKTLK
FT                   SQFVNIKNKNYECSKI"
FT   gap             428051..428150
FT                   /estimated_length=unknown
FT   gene            429721..429846
FT                   /locus_tag="C1336_000600000"
FT                   /note="C1336_000600000 identified by Glimmer3 with a raw
FT                   score of 2.61."
FT   CDS             429721..429846
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000600000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000600000 identified by Glimmer3 with a raw
FT                   score of 2.61. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30228.1"
FT                   /translation="MFRFQRLMIKLIVYGELAQLGERLLCTQEVSGSIPLFSTIY"
FT   gene            429763..429838
FT                   /locus_tag="C1336_000600007"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            429763..429838
FT                   /locus_tag="C1336_000600007"
FT                   /product="tRNA-Ala"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            429847..429923
FT                   /locus_tag="C1336_000600008"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            429847..429923
FT                   /locus_tag="C1336_000600008"
FT                   /product="tRNA-Ile"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            430134..430307
FT                   /locus_tag="C1336_000600001"
FT                   /note="C1336_000600001 identified by Glimmer3 with a raw
FT                   score of 6.96."
FT   CDS             430134..430307
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000600001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000600001 identified by Glimmer3 with a raw
FT                   score of 6.96. Gene function extrapolated from
FT                   JJD26997_1521 (CP000768.1) after blastn alignment (98.08
FT                   percent identity over a 104 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30229.1"
FT                   /translation="MFFLIIIVKSHKQVLIKTILQDLLKDKTYLSFLWFNLYLLIIFIS
FT                   IIKRILDLRFVN"
FT   gene            complement(430634..430780)
FT                   /locus_tag="C1336_000600002"
FT                   /note="C1336_000600002 identified by Glimmer3 with a raw
FT                   score of 4.20."
FT   CDS             complement(430634..430780)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000600002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000600002 identified by Glimmer3 with a raw
FT                   score of 4.20. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30230.1"
FT                   /translation="MGCPIRKSTDQSFLTAPRSLSQSSTSFIAFTSQGIHHSLLVAYLL
FT                   MFF"
FT   gene            complement(431462..431581)
FT                   /locus_tag="C1336_000600003"
FT                   /note="C1336_000600003 identified by Glimmer3 with a raw
FT                   score of 4.93."
FT   CDS             complement(431462..431581)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000600003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000600003 identified by Glimmer3 with a raw
FT                   score of 4.93. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30231.1"
FT                   /translation="MIGFGTLVYALAHSVLYPLILRHNAIPKYISERTSYHEV"
FT   gene            431563..431691
FT                   /locus_tag="C1336_000600004"
FT                   /note="C1336_000600004 identified by Glimmer3 with a raw
FT                   score of 3.83."
FT   CDS             431563..431691
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000600004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000600004 identified by Glimmer3 with a raw
FT                   score of 3.83. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30232.1"
FT                   /translation="MYQTLSNSEYLICNHSSQAASDKIRRQEGNNPDYQLRSLNLT"
FT   gene            complement(431688..431843)
FT                   /locus_tag="C1336_000600005"
FT                   /note="C1336_000600005 identified by Glimmer3 with a raw
FT                   score of 0.50."
FT   CDS             complement(431688..431843)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000600005"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000600005 identified by Glimmer3 with a raw
FT                   score of 0.50. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30233.1"
FT                   /translation="MCKSTASVLTLAPLYFPRKITRPVSYYAFFKGWLLLSQPPGCLSN
FT                   FTSFST"
FT   gene            433027..433143
FT                   /locus_tag="C1336_000600006"
FT                   /note="C1336_000600006 identified by Glimmer3 with a raw
FT                   score of 0.26."
FT   CDS             433027..433143
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000600006"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000600006 identified by Glimmer3 with a raw
FT                   score of 0.26. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30234.1"
FT                   /translation="MSYPQVGQCLVGSLTGAVASQIITEAYKGWLRTVGNRS"
FT   gap             434251..434350
FT                   /estimated_length=unknown
FT   gene            complement(434359..435567)
FT                   /locus_tag="C1336_000070000"
FT                   /note="C1336_000070000 identified by Glimmer3 with a raw
FT                   score of 9.71."
FT   CDS             complement(434359..435567)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070000"
FT                   /product="UDP-N-acetylmuramoylalanine--D-glutamate ligase"
FT                   /note="C1336_000070000 identified by Glimmer3 with a raw
FT                   score of 9.71. Gene function extrapolated from C8J_0407
FT                   (CP000814.1) after blastn alignment (99.54 percent identity
FT                   over a 217 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31296.1"
FT                   /translation="MKISLFGYGKTTRAIAENLVDKFGPFDIYDDHFTETKKDTLGNLL
FT                   LNPNDFDDNLSDIEIPSPGFPPKHKLIQKAKNLQSEYDFFYDIMPKSVWISGTNGKTTT
FT                   TQMATHLLSHIGAVMGGNVGTPLAELDPYAKLWILETSSFTLHYTHKAKPEIYALLPIS
FT                   PDHLSWHGSFDNYVQDKLSVLKRMNECDVAILPKIYANTPTKAHKISYEDEKDLAVKFG
FT                   IDTEKISFKSPFLLDAIMALAIEKILLDTLSYELLNSFVMEKNKLEELKDSQNRLWVND
FT                   TKATNESAVMAALSRYKDKKIHLIIGGDDKGVDLSNLFDFMKGFDIELYAIGISTEKML
FT                   DYAKKANLKAYKCEVLSKAVNEISNHLKDNEVALLSPACASLDQFNSYSERGKVFKECV
FT                   NKI"
FT   gene            complement(435567..436628)
FT                   /locus_tag="C1336_000070001"
FT                   /note="C1336_000070001 identified by Glimmer3 with a raw
FT                   score of 7.41."
FT   CDS             complement(435567..436628)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070001"
FT                   /product="phospho-N-acetylmuramoyl-pentapeptide-transferase"
FT                   /note="C1336_000070001 identified by Glimmer3 with a raw
FT                   score of 7.41. Gene function extrapolated from CJE0483
FT                   (CP000025.1) after blastn alignment (99.78 percent identity
FT                   over a 456 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31297.1"
FT                   /translation="MYYLSDLSHYAFFTYISVRAGFAFFIALCLSLFLMPKFITWAKAK
FT                   NASQPIYEYAPETHKTKCHTPTMGGLIFISSAVIASLFCIKFDNIFAISALLCLILFCL
FT                   IGLIDDLGKVLKKDNHSGLSPRMKLLAQIIAGLICILPLYFSSELSTELFIPFYKHPLF
FT                   DMEIFAIAFWILVLISSSNAVNLTDGLDGLATVPSIFSLSTLGIFLYLSGNLNYSEYLL
FT                   LPKIQGLGEVVIICAALIGALMGFLWYNCYPAQVFMGDSGSLALGGFIGFLAIISKNEI
FT                   LLLLIGFVFVLETVSVILQVGSFKIFNKRVFKMAPIHHHFEKVGWVENKIIVRFWMIAL
FT                   LSNLLALASIKLR"
FT   gene            436708..438186
FT                   /locus_tag="C1336_000070002"
FT                   /note="C1336_000070002 identified by Glimmer3 with a raw
FT                   score of 11.55."
FT   CDS             436708..438186
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070002"
FT                   /product="phosphoglyceromutase"
FT                   /note="C1336_000070002 identified by Glimmer3 with a raw
FT                   score of 11.55. Gene function extrapolated from C8J_0409
FT                   (CP000814.1) after blastn alignment (98.38 percent identity
FT                   over a 1479 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31298.1"
FT                   /translation="MKQKCVLIITDGIGYNKNSKFNAFEAAKKPSYEKLFKEVPNSLLK
FT                   TSGLAVGLPEGQMGNSEVGHMCIGSGRVIYQNLVRINKTIENKELEKNENLQKLLAKCK
FT                   RVHIIGLYSDGGVHSMDTHFKAMLEICAKNGNEVFAHAITDGRDVSPKSGLNFIKDLKE
FT                   FCENLGVHFATLCGRFYAMDRDKRWDRVKEYYECLLGKAYKVPNLLEYLQKSYDENITD
FT                   EFIKAAQNENYKGMREEDGIIFINFRNDRMKQLVEVLNSKDFKEFEREKIFENLLTMSV
FT                   YDDKFKLPVLFEKEKIENTLAQVISKAGLSQLHTAETEKYAHVTFFFNGGKEELLENET
FT                   RVLIPSPKVKTYDEKPQMSAFEVCNAVKKGIEKGEDFIVVNFANGDMVGHTGDFNAAIK
FT                   AVEAVDTCLGEIVECAKKHDYAFIITSDHGNCEAMQDEKGNLLTNHTTFDVFVFVQAKG
FT                   VSKIKDNMGLSNIAASVLKILDLEIPKEMNEALF"
FT   gene            438258..439001
FT                   /locus_tag="C1336_000070003"
FT                   /note="C1336_000070003 identified by Glimmer3 with a raw
FT                   score of 17.39."
FT   CDS             438258..439001
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070003"
FT                   /product="3-oxoacyl-(acyl-carrier-protein) reductase"
FT                   /note="C1336_000070003 identified by Glimmer3 with a raw
FT                   score of 17.39. Gene function extrapolated from
FT                   CJJ81176_0461 (CP000538.1) after blastn alignment (98.39
FT                   percent identity over a 744 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31299.1"
FT                   /translation="MKFSGKNVLITGASKGIGASIAKTLAGFGLKVWINYRSKPELADA
FT                   LKDEIIASGGVAAVIKFDASKEDEFENGVKTIVESDGELSYLVNNAGITNDKLALRMKL
FT                   EDFSGVVDTNLSSAFLGCREALKTMSKKRFGAVVNIASIVGEMGNAGQVNYSASKGGMI
FT                   AMTKSFAKEGASRNLRFNCVTPGFIKSDMTEVLSDEIKQAYQDNIPLKRFAEPEEVANC
FT                   VAFLLSDYASYVTGDVLKINGGLYM"
FT   gene            439011..439418
FT                   /locus_tag="C1336_000070004"
FT                   /note="C1336_000070004 identified by Glimmer3 with a raw
FT                   score of 15.28."
FT   CDS             439011..439418
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070004 identified by Glimmer3 with a raw
FT                   score of 15.28. Gene function extrapolated from
FT                   JJD26997_1508 (CP000768.1) after blastn alignment (97.06
FT                   percent identity over a 408 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31300.1"
FT                   /translation="MDLKEIAQFLDDNAPAFLATLGTCGNPRVRPIQSPLLVGDKIYFC
FT                   TANTKGLFKHIKNYSGIEFCSCSKDGTFLRLRANAVFEPNLEVKKMMFEKYPYLVNLYE
FT                   TPQNPKFEVFYLDHLSARMQFANGEFKLFKA"
FT   gene            439756..441591
FT                   /locus_tag="C1336_000070005"
FT                   /note="C1336_000070005 identified by Glimmer3 with a raw
FT                   score of 15.56."
FT   CDS             439756..441591
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070005"
FT                   /product="succinate dehydrogenase, flavoprotein subunit"
FT                   /note="C1336_000070005 identified by Glimmer3 with a raw
FT                   score of 15.56. Gene function extrapolated from
FT                   CJJ81176_0463 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 755 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31301.1"
FT                   /translation="MGEFSRRDFIKTACISVGALAASSSGVYALDDSSKMDKDTNLPSC
FT                   DVLVIGSGGAGLRAAAAVRKENPKLSVVVATKMMPSRNATCMAEGGINGVTDFSNGDSY
FT                   KLHAYDTIKGGAYLVDQDAALKFCELAGKAIFNMDFIGTLFSRNEQGGVAQRLMGGASK
FT                   KRCNYSADKTGHILMHSCLDDAISSGVKFLMDHELLDIGVVDGKCEGVVLRDIQSGGIY
FT                   PVLCKALVIATGGYTRIFYNRTSTPFIATGDGVAAALRAGLGFEDPEMIQFHPTGVANG
FT                   GTLITEAARGEGGYLLNNRGERFMKNYHEKMELAPRDVVARAIETEIREGRGYGEGLGA
FT                   YVLCDVRHLGKEKILKDLPKIRHTAMLFENIDLVDTPVPIRPTAHYSMGGIEVAKFEDM
FT                   STKIAGIYVGGEASCISIHGANRLGGNSLADAVVTGHLAGIGATNYAKDASFGKGAKTH
FT                   ELAQKWQARFKEITNNGGNGQEMYELREELGSQNWDNMGIFRTQEKLDLLAKNLEDIQA
FT                   RYEKIRIPNPNEVMNTAFTDYVELGNLILLSRCACLAARNRLESRGAHTREDYPKRDDK
FT                   NFLKHSIVNLENDELKLSYKDVVVTEFSLDGRRVQ"
FT   gene            441588..442553
FT                   /locus_tag="C1336_000070006"
FT                   /note="C1336_000070006 identified by Glimmer3 with a raw
FT                   score of 12.95."
FT   CDS             441588..442553
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070006"
FT                   /product="succinate dehydrogenase, iron-sulfur protein
FT                   subunit"
FT                   /note="C1336_000070006 identified by Glimmer3 with a raw
FT                   score of 12.95. Gene function extrapolated from C8J_0413
FT                   (CP000814.1) after blastn alignment (99.69 percent identity
FT                   over a 966 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31302.1"
FT                   /translation="MKIIIDRFNGKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDITL
FT                   NFTASCQSAICGACAVRVNGHSYLACDTKMQDLLKEYDNPSSIRISPLGNFRVISDLIV
FT                   DWEPSIENLRKIRPAMVAKNEFSAEKGCKQSQEEFDRISKQWDCILCGSCASECNKLEA
FT                   DSSDYMQPFVFTHAWRAAADSRGKDPMLHVKPSVMNGLWLCVHCQECADRCPKGISSVS
FT                   DIANLRVMAIKKGLNEGLGPDHAEAFYKDLVEGSGRLNEIYLALRSEGVIGSMGKTDIA
FT                   FKLMRAGKMNPMHVFGEDEIEGHKDLVKMIKAAQEAAVKE"
FT   gene            442557..443416
FT                   /locus_tag="C1336_000070129"
FT                   /note="Features C1336_000070007, C1336_000070008 joined to
FT                   form C1336_000070129 to correct 454 sequencing error
FT                   (C1336_000070007 identified by Glimmer3 with a raw score of
FT                   13.99, C1336_000070008 identified by Glimmer3 with a raw
FT                   score of 5.19)."
FT   CDS             join(442557..443174,443174..443416)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070129"
FT                   /product="succinate dehydrogenase, C subunit"
FT                   /note="Features C1336_000070007, C1336_000070008 joined to
FT                   form C1336_000070129 to correct 454 sequencing error
FT                   (C1336_000070007 identified by Glimmer3 with a raw score of
FT                   13.99, C1336_000070008 identified by Glimmer3 with a raw
FT                   score of 5.19). Gene function extrapolated from
FT                   CJJ81176_0465 (CP000538.1) after blastn alignment (98.84
FT                   percent identity over a 861 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31303.1"
FT                   /translation="MQKEYAFFPGCVLSQAAKESKISLEAIAPILGWKLNEIKGWSCCG
FT                   ASQAQCVDPIATLVANARNIALAEEMKMPMLTTCSTCMLTLTKAKNTLDKGAKERINTF
FT                   LAQGGMKYQGSTPITSLLWELYEDLDNLKSKVKKPLSNLKVALFYGCHSLRPEDTFGKK
FT                   ESSTNPKSFESVVEVLGAKIVPFEKRLDCCGFHASYPAEKICEKKMSSQIVNNASENQA
FT                   DCVVTPCPLCQMQLDIYQERFQDYTNSKARLPIIHLSQLVGLALGLSKETVGLDYNIID
FT                   ASKIA"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(443440..444105)
FT                   /pseudo
FT                   /locus_tag="C1336_000070130"
FT                   /note="Features C1336_000070009, C1336_000070010 joined to
FT                   form C1336_000070130 to correct 454 sequencing error
FT                   (C1336_000070009 identified by Glimmer3 with a raw score of
FT                   12.94, C1336_000070010 identified by Glimmer3 with a raw
FT                   score of 7.71)."
FT   CDS             complement(join(443440..443967,443980..444105))
FT                   /pseudo
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070130"
FT                   /note="Features C1336_000070009, C1336_000070010 joined to
FT                   form C1336_000070130 to correct 454 sequencing error
FT                   (C1336_000070009 identified by Glimmer3 with a raw score of
FT                   12.94, C1336_000070010 identified by Glimmer3 with a raw
FT                   score of 7.71). Yet to account for left and right orfs in
FT                   same frame and so set to pseudogene."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /artificial_location="low-quality sequence region"
FT   gene            444217..444450
FT                   /locus_tag="C1336_000070011"
FT                   /note="C1336_000070011 identified by Glimmer3 with a raw
FT                   score of 16.96."
FT   CDS             444217..444450
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070011"
FT                   /product="acyl carrier protein"
FT                   /note="C1336_000070011 identified by Glimmer3 with a raw
FT                   score of 16.96. Gene function extrapolated from C8J_0416
FT                   (CP000814.1) after blastn alignment (99.55 percent identity
FT                   over a 224 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31304.1"
FT                   /translation="MATFDDVKAVVVEQLSIDADAVKMESKIIEDLGADSLDVVELIMA
FT                   LEEKFEVEIPDSDAEKLIKIEDVVNYIDNLKK"
FT   gene            444476..445690
FT                   /locus_tag="C1336_000070012"
FT                   /note="C1336_000070012 identified by Glimmer3 with a raw
FT                   score of 15.52."
FT   CDS             444476..445690
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070012"
FT                   /product="3-oxoacyl-(acyl-carrier-protein) synthase II"
FT                   /note="C1336_000070012 identified by Glimmer3 with a raw
FT                   score of 15.52. Gene function extrapolated from
FT                   CJJ81176_0469 (CP000538.1) after blastn alignment (98.85
FT                   percent identity over a 1215 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31305.1"
FT                   /translation="MKRVVVTGIGMINALGLDKESSFKAICNGESGVNKITLFDATDFP
FT                   VQIAAEVKNFDPLEVVDGKEVKKIDRFIQLGIKAAREAMQDAGFSEELDKEEFGIVSAA
FT                   GIGGLPNIEKNSIICSERGPRKISPFFIPSALVNMLGGLISIEHGLKGPNISCVTACAA
FT                   GTHAIGEAYKSIALGNAKKMLVIGAEAAICPVGIGGFASMKALSTRNEDPQHASRPFDK
FT                   ERDGFVMGEGAGALIFEEYEEAKKRSATIYAELIGFGESADAHHITSPTLDGPLRAMKK
FT                   ALNMAGNPKVDYINAHGTSTPINDKNETAAIKELFGDNIPLISSTKGQTGHCLGAAGAI
FT                   EAVVSVMALRDGVVPPTINQLVKDDECDLDYVPNISRKVDLKVVMSNSFGFGGTNGCVV
FT                   FKKVD"
FT   gene            445692..446630
FT                   /locus_tag="C1336_000070013"
FT                   /note="C1336_000070013 identified by Glimmer3 with a raw
FT                   score of 14.12."
FT   CDS             445692..446630
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070013"
FT                   /product="acetyl-CoA carboxylase, carboxyl transferase,
FT                   alpha subunit"
FT                   /note="C1336_000070013 identified by Glimmer3 with a raw
FT                   score of 14.12. Gene function extrapolated from
FT                   CJJ81176_0470 (CP000538.1) after blastn alignment (99.36
FT                   percent identity over a 939 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31306.1"
FT                   /translation="MASYLDFEKNIQQIDEDIINAQIKGDTEAVSILKKNLEKEISKTY
FT                   KNLSDFQRLQLARHPDRPYALDYIELILNDAHEIHGDRAFRDDPAIVCFMGYLGEKKII
FT                   VIGEQKGRGTKDKIARNFGMPHPEGYRKALRVARLAEKFQIPILFLIDTPGAYPGIGAE
FT                   ERGQSEAIARNLYELSDLKIPTIAIVIGEGGSGGALAIGVADRLAMMKNSVFSVISPEG
FT                   CAAILWNDPAKSEAATKAMKVTADDLKSQGLIDDVIDEPTNGAHRNKEAAAVAIADYVK
FT                   KSLNELENIDVRELSANRMQKILKLGAYQEA"
FT   gene            446765..448834
FT                   /locus_tag="C1336_000070014"
FT                   /note="C1336_000070014 identified by Glimmer3 with a raw
FT                   score of 10.20."
FT   CDS             446765..448834
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070014"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070014 identified by Glimmer3 with a raw
FT                   score of 10.20. Gene function extrapolated from C8J_0419
FT                   (CP000814.1) after blastn alignment (97.64 percent identity
FT                   over a 2073 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31307.1"
FT                   /translation="MTQIKNMKFKKSLLCFLILSGALLKAEEKYQLNDVVVSASGFEQD
FT                   LVDAPASISIITKEELEKKPIKDIGEAIGDIPGVDVTMNKTGTYDFSIRGFGSSYTLVL
FT                   IDGKRQSVANGFYDNGFSGSESGYLPPLSMIERIEVIRGPASTLYGSDAVGGVINIITK
FT                   KNPDKTEANIEFNTLLQQHSNHYGNAGGFNAYVATPLIEDTLSISARLKYYDKATSDLK
FT                   WPTPVWNSSQQRPDNYQIASHSPGAFTSLGFGSRLNWTVNDKNNIYFDIERYINEISVN
FT                   STSSRAIKSERQLFKDNIVLNHDGNYDFGSTNSYLQYGSTKDKELHSQIWVGEGKVVLP
FT                   WNLGQYGNLVNTFGVRIDYEMLKNDQASAGSQIRGKNLDQTTVALYGENEYFITDDLIF
FT                   TTGLRYIYSDLFDSEFTPRVYLVYHLNDNIAFKGGVSKGYKTPAAKELTNGYYNYSNDN
FT                   AYFGNPDLKPEESINYELGVDFRIFDFAHYSITGFITDFTNQISSEDLTGLLNGINCDD
FT                   NTCTRPINLGKTQTKGVEFAFNTKTYNGFSLNSSYTFMDNHYKDGQKNWFGGDRIENLP
FT                   RHIAMLKLNYERGKFSSYIKTRARLDTIAKAKGGGNGSLPWQKYKPFYIVDLVINYKIN
FT                   KQSSLSFAVQNLFDKNFFDPQVTKWDGANPAGYANRYQDYTEGRSFWLSYKYDF"
FT   gene            448917..449513
FT                   /locus_tag="C1336_000070015"
FT                   /note="C1336_000070015 identified by Glimmer3 with a raw
FT                   score of 14.71."
FT   CDS             448917..449513
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070015"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070015 identified by Glimmer3 with a raw
FT                   score of 14.71. Gene function extrapolated from C8J_0420
FT                   (CP000814.1) after blastn alignment (97.77 percent identity
FT                   over a 583 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31308.1"
FT                   /translation="MAFKNLKELSFEKSNYIKPKRFAYESNGKFCTWDFIESKDSVSVL
FT                   LYHKELESFIFVRQFRIPLWYHQMHDKDYVKDDNMGYTIELCSGLVDKKLSLEEIAKEE
FT                   CIEELGYAPRNLEKIGDFYIGFGSGVSKQSFYFAEVDKKDKISSGGGVGDEEIEAVYVK
FT                   VQDFEKKCKNMIRTPLLDFAYMWFLKEKWGKLKII"
FT   gene            complement(449545..450642)
FT                   /locus_tag="C1336_000070016"
FT                   /note="C1336_000070016 identified by Glimmer3 with a raw
FT                   score of 11.87."
FT   CDS             complement(449545..450642)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070016"
FT                   /product="putative MCP-type signal transduction protein"
FT                   /note="C1336_000070016 identified by Glimmer3 with a raw
FT                   score of 11.87. Gene function extrapolated from C8J_0421
FT                   (CP000814.1) after blastn alignment (98.57 percent identity
FT                   over a 981 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31309.1"
FT                   /translation="MFGSKINHSDLQKLEEENKNLAHKIEKFQSENLELKNKITSLEQA
FT                   ALESKLKTDLLNVLLTGVLKNITIVQGDMLENVNKAEVISSYSKTSLAEMDELNHIANS
FT                   INASLGDITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAARAGE
FT                   HGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISIDSNAHIM
FT                   SFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNAYKEIFSKSGKQLADHT
FT                   SCRLGKWLASTGKERFGQNKSFLKINEPHEKVHENMNNAITIANTEDISKDITQHSIIN
FT                   KCEVAENASLDLFNVFKEMLDESDH"
FT   gene            complement(450652..450867)
FT                   /locus_tag="C1336_000070017"
FT                   /note="C1336_000070017 identified by Glimmer3 with a raw
FT                   score of 10.81."
FT   CDS             complement(450652..450867)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070017"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070017 identified by Glimmer3 with a raw
FT                   score of 10.81. Gene function extrapolated from
FT                   CJJ81176_0474 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 216 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31310.1"
FT                   /translation="MLHEYRELMSELKGKDAHFDKLFDRHNELDDMIKDAEEGRTSLSS
FT                   MEISTLKKEKLHVKDELSQYLANYKK"
FT   gene            complement(451052..451246)
FT                   /locus_tag="C1336_000070018"
FT                   /note="C1336_000070018 identified by Glimmer3 with a raw
FT                   score of 6.71."
FT   CDS             complement(451052..451246)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070018"
FT                   /product="ribosomal protein L28"
FT                   /note="C1336_000070018 identified by Glimmer3 with a raw
FT                   score of 6.71. Gene function extrapolated from CJE0500
FT                   (CP000025.1) after blastn alignment (98.97 percent identity
FT                   over a 195 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31311.1"
FT                   /translation="MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLEDGTT
FT                   RKMRIAASTLRTLKKQNSK"
FT   gene            451386..452033
FT                   /locus_tag="C1336_000070019"
FT                   /note="C1336_000070019 identified by Glimmer3 with a raw
FT                   score of 9.83."
FT   CDS             451386..452033
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070019"
FT                   /product="ribulose-phosphate 3-epimerase"
FT                   /note="C1336_000070019 identified by Glimmer3 with a raw
FT                   score of 9.83. Gene function extrapolated from C8J_0424
FT                   (CP000814.1) after blastn alignment (99.38 percent identity
FT                   over a 648 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31312.1"
FT                   /translation="MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTF
FT                   GPCVIEKISTISKLPLDVHLMVKDVSKFIDLFIPLKPKFISFHMESEVHPIRLCEYIRS
FT                   QGIHPAIVLNPHTPIDSIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDK
FT                   KNAKVFIEVDGGVNGLNASDLEESGADILVAGSYIFSSNDYKTAISSLKLEF"
FT   gene            452030..452791
FT                   /locus_tag="C1336_000070020"
FT                   /note="C1336_000070020 identified by Glimmer3 with a raw
FT                   score of 12.48."
FT   CDS             452030..452791
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070020"
FT                   /product="exonuclease, possibly dna polymerase III epsilon
FT                   subunit"
FT                   /note="C1336_000070020 identified by Glimmer3 with a raw
FT                   score of 12.48. Gene function extrapolated from C8J_0425
FT                   (CP000814.1) after blastn alignment (99.34 percent identity
FT                   over a 762 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31313.1"
FT                   /translation="MSLQQIDQIISILNKQSKPYDWVMQEFAKVEELKNFDLDLETFEL
FT                   LGLGLTLNKDNIFTLKTRTTKIKDEIFCIVDIESTGGVSKGEILEIGAVKIQNSKEIGR
FT                   FQSFVKVKEIPENITELTGITYEMVENALSLAKVLSDFRLFLKDSIFVAHNVRFDYSFI
FT                   SKALNECGFGILLNRRICTIEFAQCCIESPKYKLEVLKEFLGVENTHHRALDDALAAAE
FT                   IFKYCLGKLPYHIKTTEELINFTKTARIKQK"
FT   gene            452974..454266
FT                   /locus_tag="C1336_000070021"
FT                   /note="C1336_000070021 identified by Glimmer3 with a raw
FT                   score of 15.92."
FT   CDS             452974..454266
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070021"
FT                   /product="thiamine biosynthesis protein ThiC"
FT                   /note="C1336_000070021 identified by Glimmer3 with a raw
FT                   score of 15.92. Gene function extrapolated from CJE0503
FT                   (CP000025.1) after blastn alignment (98.61 percent identity
FT                   over a 1293 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31314.1"
FT                   /translation="MKTQMNYAKEGVFTKEMQIVAQKENLSKDFLLENIACGKIIIPAN
FT                   INHNSLDPNGIGFGLRTKVNVNLGVSNDCVDYSEEMKKVELAHKFDIEAIMDLSNYGKT
FT                   SRFRDELVNVSKAMIGTVPVYDAVGFLEKDLKQINAKDFLDVVYHHAKSGVDFMTIHAG
FT                   INSRAAHIFKQSKRLTNIVSRGGSVLYAWMMMKDAENPFFEYYDDLLDICLKYDVTLSL
FT                   GDALRPGSTHDASDGAQISELIELSLLTQRAWDVGVQVMIEGPGHMAINEIEANMQLEK
FT                   RLCKGAPFYVLGPLVTDIGAGYDHISGAIGGAVAAASGADMLCYVTPAEHLRLPNLEDV
FT                   REGIVATKIAAHAGDIAKLPKERARDDEMSKARQEIDWEKMFKLAIDGEKAKKMFNERR
FT                   PDDLNSCSMCGKMCAMNTMNQILKGEDVSLA"
FT   gene            complement(454258..454776)
FT                   /locus_tag="C1336_000070022"
FT                   /note="C1336_000070022 identified by Glimmer3 with a raw
FT                   score of 8.67."
FT   CDS             complement(454258..454776)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070022"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070022 identified by Glimmer3 with a raw
FT                   score of 8.67. Gene function extrapolated from C8J_0427
FT                   (CP000814.1) after blastn alignment (98.80 percent identity
FT                   over a 166 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31315.1"
FT                   /translation="MKDKSLEEIDLLKLIICALSFISVFTALILFLLLPTLKNYKQANL
FT                   RENSQLAILKATKSKFDFSEDKISTLRSENNKSLEQFEQNFNIGNFDIFLQKYFQNVKI
FT                   QETKPEKQEKYLKNRLAIKATMNNPRRLYDFIDALKNYNNLIKLDYPLNLKGGEQGISI
FT                   DLILKVYSS"
FT   gene            complement(454766..455293)
FT                   /locus_tag="C1336_000070023"
FT                   /note="C1336_000070023 identified by Glimmer3 with a raw
FT                   score of 9.12."
FT   CDS             complement(454766..455293)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070023"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070023 identified by Glimmer3 with a raw
FT                   score of 9.12. Gene function extrapolated from C8J_0428
FT                   (CP000814.1) after blastn alignment (99.43 percent identity
FT                   over a 528 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31316.1"
FT                   /translation="MTYSFIQPRKKPIFTLFDKIWLGLFGFSILFILLVYFTYTIKIAL
FT                   INSSIDDEKQQVIVLQNQTKQNEMLYEILFDQSQIAKNFNTQNQIIKESLRNLFDIIVK
FT                   TDNITLESVEQDEYSLKLIGVTPTREMFTLLLETPLKSIFDQSYTTYYRLDNGWYRFVS
FT                   ISKQIPGVVDER"
FT   gene            complement(455290..456249)
FT                   /locus_tag="C1336_000070024"
FT                   /note="C1336_000070024 identified by Glimmer3 with a raw
FT                   score of 9.27."
FT   CDS             complement(455290..456249)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070024"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070024 identified by Glimmer3 with a raw
FT                   score of 9.27. Gene function extrapolated from C8J_0429
FT                   (CP000814.1) after blastn alignment (98.65 percent identity
FT                   over a 960 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31317.1"
FT                   /translation="MLFLLKKIFPQLFISIILEDKKNIVKASIYRGNKLISSNEKTFDK
FT                   SENLLEYIKNLSKHFLFYHTALFLDAKEQGLIPSTNIQDCEHFNIGKISLQHILFNNAL
FT                   VYTATEHVEYYSELFEEYRGLDFLYSPFALLYYNIQKEKQPDDQNLLYGFKQGHLLAII
FT                   VAKGNTILYGDFKIFEQELGLELELPSEDNQEIENNNDDTEVTLDNFNEALNSKFDLLD
FT                   QENNLETLDNNDNFNLDELNQFSNDMELCRYIITSIEKFYNDDKYAGVFINGILLYSES
FT                   DINISAIDFLESETFLEIKTKQINTLDLMIELMQKELK"
FT   gene            complement(456251..456832)
FT                   /locus_tag="C1336_000070025"
FT                   /note="C1336_000070025 identified by Glimmer3 with a raw
FT                   score of 6.77."
FT   CDS             complement(456251..456832)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070025"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070025 identified by Glimmer3 with a raw
FT                   score of 6.77. Gene function extrapolated from
FT                   CJJ81176_0482 (CP000538.1) after blastn alignment (99.09
FT                   percent identity over a 438 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31318.1"
FT                   /translation="MQWLIFLSCKKHYKGERVDRKAGVILFWHGKLALMPFAFRHYRQK
FT                   NKKAYVMISHHKDGEQIAKIIKLFGLDTVRGSTSRGASSALRAAFKVLEQNDDIVITPD
FT                   GPRGPYHSISDGSIILAQKKELKIRILNYEANRFWEFKSWDKMILPKPFSKITYSLSEP
FT                   LDILSLDKEKAKEFLMEQFDKISLADQFKE"
FT   gene            complement(456864..458165)
FT                   /locus_tag="C1336_000070026"
FT                   /note="C1336_000070026 identified by Glimmer3 with a raw
FT                   score of 9.48."
FT   CDS             complement(456864..458165)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070026"
FT                   /product="tRNA-i(6)A37 thiotransferase enzyme MiaB"
FT                   /note="C1336_000070026 identified by Glimmer3 with a raw
FT                   score of 9.48. Gene function extrapolated from C8J_0431
FT                   (CP000814.1) after blastn alignment (98.69 percent identity
FT                   over a 1302 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31319.1"
FT                   /translation="MSAKKLFIQTLGCAMNVRDSEHMIAELTQKENYALTEDIKEADLI
FT                   LINTCSVREKPVHKLFSEVGGFEKVKKEGAKIGVCGCTASHLGNEIFKRAPYVDFVLGA
FT                   RNISKITQAIKTPKFMGVDIDYDESEFAFADFRNSIYKSYINISIGCDKHCTYCIVPHT
FT                   RGDEISIPFNIIYKEAQKAVEKGAKEIFLLGQNVNNYGKRFRNEHKKMDFSDLLEELST
FT                   IEGLERIRFTSPHPLHMDDKFLKVFANNPKVCKSMHMPLQSGSSEILKAMKRGYTKEWY
FT                   LNRALKLRELCPNVSISTDIIVAFPGESEKDFEETMDVLEKVRFEQIFSFKYSKRPLTK
FT                   AATMPNQIDEETASRRLSTLQNRHSEILDEIVKKQENKTFKVLFEELRAGNSIAGRTDN
FT                   NFLVQVEGSEELLGQFKEVKITNAKRMVLYGEIV"
FT   gene            complement(458162..458404)
FT                   /locus_tag="C1336_000070027"
FT                   /note="C1336_000070027 identified by Glimmer3 with a raw
FT                   score of 14.60."
FT   CDS             complement(458162..458404)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070027"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070027 identified by Glimmer3 with a raw
FT                   score of 14.60. Gene function extrapolated from C8J_0432
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 140 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31320.1"
FT                   /translation="MELKLARTLINEKPKNISLEKIEEAIEKEGQKFFYFDKDNTHKQL
FT                   IALVNHFEKKGVSIYHRTVKYGLDDNDFMYEVHIL"
FT   gene            458532..459620
FT                   /locus_tag="C1336_000070028"
FT                   /note="C1336_000070028 identified by Glimmer3 with a raw
FT                   score of 13.87."
FT   CDS             458532..459620
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070028"
FT                   /product="transcription termination factor NusA"
FT                   /note="C1336_000070028 identified by Glimmer3 with a raw
FT                   score of 13.87. Gene function extrapolated from C8J_0433
FT                   (CP000814.1) after blastn alignment (99.55 percent identity
FT                   over a 896 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31321.1"
FT                   /translation="MEKIADIIESIANEKNLNLENVREKVATALINTAKRIYGQEYEFF
FT                   VDPKNLNLYQKITIVADNDERLQNKSESFIALSKAKSEAPDVEIGDELTYECSLENLGR
FT                   TAVNTLHKELEYHIQKLLEQTIFEKYKNKVGQMVFGTVVRVDNEENTFIEIDELRAFLP
FT                   RKNRIKGEKFKIGDVVKAVIRRVYTDKGIKIELSRTSPKFLECLLEAEVPEIKDGYVNI
FT                   IGCARIPGERAKIILQANGANIDPVGATVGVKGVRINAVSKELHNENIDCIEFTNESEI
FT                   LISRALAPAIVNSVKIEDKKAIVSLNSEQKSKAIGKNGINIRLASMLSGYEIELNELSS
FT                   SQLNNAISNEEAMKNLQDLFKI"
FT   gene            complement(459636..460823)
FT                   /locus_tag="C1336_000070029"
FT                   /note="C1336_000070029 identified by Glimmer3 with a raw
FT                   score of 11.17."
FT   CDS             complement(459636..460823)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070029"
FT                   /product="transporter, putative"
FT                   /note="C1336_000070029 identified by Glimmer3 with a raw
FT                   score of 11.17. Gene function extrapolated from CJE0511
FT                   (CP000025.1) after blastn alignment (99.16 percent identity
FT                   over a 239 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31322.1"
FT                   /translation="MNYIELLKNNKNIRILASVQFIVYFGAWFSQTGVFTLLVELNAPT
FT                   WATATSAMLAFLPGVLLAPINGVIVEKNKPKKLLLSMISIELISIFCLIFVTSLSMLWL
FT                   LFILIFIRLCVASIYFQAEMSLLAKILTPQELKLANEMHSVIWAISYTAGMASAGIFIY
FT                   FLGVKTAFLFDCVLILIGISFLVRLSIPDFHQKTQNRFFTMIKEGFFYVLNNKIIFHLI
FT                   LLHAFIGLTAYETLVTLLAQHQYKEVLSAALVIGFLNAVRACSLAIGPMVLSKFINDKN
FT                   LFYMYLGQGLGIILWALTQFNFYISFLGLIGAGFFTSALWAYTYTMIQKNADKEYHGRV
FT                   IAYTDMIYLSFSAIISMLMGFLFEIGLSLELITGLLGMIFIFAAFYWKWFYKKYL"
FT   gene            460897..461943
FT                   /locus_tag="C1336_000070030"
FT                   /note="C1336_000070030 identified by Glimmer3 with a raw
FT                   score of 13.73."
FT   CDS             460897..461943
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070030"
FT                   /product="radical SAM domain protein"
FT                   /note="C1336_000070030 identified by Glimmer3 with a raw
FT                   score of 13.73. Gene function extrapolated from
FT                   CJJ81176_0487 (CP000538.1) after blastn alignment (97.99
FT                   percent identity over a 1047 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31323.1"
FT                   /translation="MKRLDKKEALDLLYHASLTELGEMAYKRKLELHPEKITTFVVDRN
FT                   INYTNVCCIDCSFCAFYRHHKEDDAYILSFEEIGKKIEELEAIGGTQILFQGGVHPKLK
FT                   IEWYEELVSWIKEHYPNITVHGFSAVEIAYIAKASKISITEVLKRLQAKGLFSIPGAGA
FT                   EVLSDRVRDIIAPNKCDTATWLEVHRQAHKIGMKSTATMMFGTVENDEEIIDHFEHLRK
FT                   LQDETGGFRAFILWSFQSDNTALIQKHPEIMKQSSNKYLRLLALARLYLDNFKNLQSSW
FT                   VTQGSLIGQLALKFGANDLGSTMMEENVVSAAGASYRMNQDEMIRLIRSLGENPAKRNT
FT                   AYEILERF"
FT   gene            461943..463163
FT                   /locus_tag="C1336_000070031"
FT                   /note="C1336_000070031 identified by Glimmer3 with a raw
FT                   score of 14.88."
FT   CDS             461943..463163
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070031"
FT                   /product="peptidase, putative"
FT                   /note="C1336_000070031 identified by Glimmer3 with a raw
FT                   score of 14.88. Gene function extrapolated from
FT                   CJJ81176_0488 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 270 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31324.1"
FT                   /translation="MQYLESRGVKIPFIFEKNSDFPIVVLKLVFRNCARSYDEIAGLAK
FT                   MFSRILNEGVDDKFFKDLEFRAINLEASSGFESLEINLSCLKENFDFALKSLEKLLLKP
FT                   RIEEKTLQKLKINALGELASKNSDFDYLAKNLLNAQIFKCKEFQSPNDGDEKSIETLSL
FT                   KDLQNFYKNFIHLSDLVVILGGDLEEKQAKEDLLKLLSKLQIGKKNTPKKYELSKNIKD
FT                   EILVRPESEQAYIYFATPFFADFKDKDLYLAKIALFVLGQGGFGSRIMEEIRVKRGLAY
FT                   SAYAMLDMNMSFSRVFGYLQTKNESAKEAKKIVKELFEDFIKNGMTQNELDQAKNFLIG
FT                   STPLRYESLSKRLSIAFNEFYQGLNLGYYKEELKLMEKVKLETINAYIKKHQELLNISF
FT                   ASIQNEN"
FT   gene            463153..465015
FT                   /locus_tag="C1336_000070032"
FT                   /note="C1336_000070032 identified by Glimmer3 with a raw
FT                   score of 11.12."
FT   CDS             463153..465015
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070032"
FT                   /product="ATP-dependent DNA helicase"
FT                   /note="C1336_000070032 identified by Glimmer3 with a raw
FT                   score of 11.12. Gene function extrapolated from C8J_0437
FT                   (CP000814.1) after blastn alignment (99.64 percent identity
FT                   over a 278 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31325.1"
FT                   /translation="MKIKESDFEFFKKLKIRSAIDLALLLPKKIENLNPSKNPKENEIC
FT                   TQKITIKSVSSRKNQLFGLGFCEEWQENISFVFFHPRAWHFGVCKVGKELVFNAKLSRF
FT                   NHTWQFNNPKILTSFEGFSPKYQILGLKDTKIAAFIHKYLNYENLKESGIEDKYIHFLL
FT                   NLHAYDEKSFFMFENLQNFSKDLKYIEIYNFLKRLKAKQTHFKAHQINVFNIANWLKDL
FT                   PFSLTKDQLNALKDIEKDLHSKEAKRRVIMGDVGCGKTLVLLGAALMVYPKQAILMAPT
FT                   SILAYQLYEEAKKFLPDFMNILFIKGGKKEKDLEQNIQKANLIIGTHALIHLESHNAVL
FT                   VMIDEQHRFGSAQREKIHSLNKQEFAPHFIQFSATPIPRTLSMIQSELLNFSFIKQMPF
FT                   KKDITTYCIQNEGFSKLSEKIKEEIAKNHQIIIIYPLVSASDNIPYLSLEQARGYWQSH
FT                   YEKVFVTHGKDKQKDEILERFRDEGNILLSTTVVEVGISLPRLSMIVIVGAERLGLATL
FT                   HQLRGRVGRVGLKSTCYLYTKLKEIPSRLKEFASTLDGFKIAELDLKNRFSGDLLDGFM
FT                   QHGNEFKFFDFSKDEEILEKVKKDLAKKIAKLMSTVLIKHILKM"
FT   gene            complement(464974..465357)
FT                   /locus_tag="C1336_000070033"
FT                   /note="C1336_000070033 identified by Glimmer3 with a raw
FT                   score of 11.42."
FT   CDS             complement(464974..465357)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070033"
FT                   /product="group III hemoglobin"
FT                   /note="C1336_000070033 identified by Glimmer3 with a raw
FT                   score of 11.42. Gene function extrapolated from Cj0465c
FT                   (AL111168.1) after blastn alignment (98.44 percent identity
FT                   over a 384 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31326.1"
FT                   /translation="MKFETINQENIAKLMEIFYEKVRKDKDLGPIFNNAIGTSDEEWKE
FT                   HKAKIGNFWAGMLLGEGDYNGQPLKKHLDLPPFPQEFFEIWLKLFEESLNIVYNEEMKN
FT                   VILQRAQMIASHFQNMLYKYGGH"
FT   gene            465452..466048
FT                   /locus_tag="C1336_000070034"
FT                   /note="C1336_000070034 identified by Glimmer3 with a raw
FT                   score of 12.06."
FT   CDS             465452..466048
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070034"
FT                   /product="putative transcriptional regulator"
FT                   /note="C1336_000070034 identified by Glimmer3 with a raw
FT                   score of 12.06. Gene function extrapolated from C8J_0439
FT                   (CP000814.1) after blastn alignment (99.26 percent identity
FT                   over a 538 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31327.1"
FT                   /translation="MKDYLELLSSVGKLKKFQKNSILFYEGEEAKKFFILLKGKIRIYK
FT                   STASDKEITLHYFNPPNFIAEMPAFKKLNYPANAIFEEDGEILEIDFVNFQNLCSENKE
FT                   FNFLLISSLFDKIKILEKKLSQNALDLRTRLLKYLLENEKNLDTISQKQIAIDLNVRAQ
FT                   SLSRVLKELKISELIDTKKGRIEILNKDMIMKELW"
FT   gene            466065..466766
FT                   /locus_tag="C1336_000070035"
FT                   /note="C1336_000070035 identified by Glimmer3 with a raw
FT                   score of 10.91."
FT   CDS             466065..466766
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070035"
FT                   /product="polar amino acid transport system permease
FT                   protein"
FT                   /note="C1336_000070035 identified by Glimmer3 with a raw
FT                   score of 10.91. Gene function extrapolated from C8J_0440
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 72 bp alignment).; overlaps another CDS
FT                   with the same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31328.1"
FT                   /translation="MDFDFILVQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFK
FT                   IKILENICKLYIEFSRNTPLLIQLFFLYYALPKFNIHLEQIPPLDLICLSVEETLRPSF
FT                   ACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMP
FT                   SISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILPLSFI
FT                   LLKFEKRLFHA"
FT                   /artificial_location="low-quality sequence region"
FT   gene            466759..467415
FT                   /locus_tag="C1336_000070036"
FT                   /note="C1336_000070036 identified by Glimmer3 with a raw
FT                   score of 11.17."
FT   CDS             466759..467415
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070036"
FT                   /product="polar amino acid transport system permease
FT                   protein"
FT                   /note="C1336_000070036 identified by Glimmer3 with a raw
FT                   score of 11.17. Gene function extrapolated from C8J_0441
FT                   (CP000814.1) after blastn alignment (98.92 percent identity
FT                   over a 554 bp alignment).; overlaps another CDS with the
FT                   same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31329.1"
FT                   /translation="MLELLNTDTLLRLWQGLFVTLEISFISIIITSIGGLFLGILMSFK
FT                   NTYIYAFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDLSSVSAAIIVFSIWGCFEMMD
FT                   LVRVSLQSIPKHQYESASSLGLNTVQSFVYIIIPQAMRRLTPMSMNLLTRMIKSTTFAY
FT                   LIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS"
FT                   /artificial_location="low-quality sequence region"
FT   gene            467417..468154
FT                   /locus_tag="C1336_000070037"
FT                   /note="C1336_000070037 identified by Glimmer3 with a raw
FT                   score of 16.43."
FT   CDS             467417..468154
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070037"
FT                   /product="polar amino acid transport system ATP-binding
FT                   protein"
FT                   /note="C1336_000070037 identified by Glimmer3 with a raw
FT                   score of 16.43. Gene function extrapolated from C8J_0442
FT                   (CP000814.1) after blastn alignment (99.05 percent identity
FT                   over a 738 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31330.1"
FT                   /translation="MSILKIENLQKYYGSHHALKDINLEVKAKEVVVILGPSGCGKSTL
FT                   LRCINGLEEIASGNIYVDNEKIDKDFKEWPRMRQKVGMVFQSYELFEHLSVEENILLGP
FT                   MKVQKRKKDEVLKEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELMLFD
FT                   EVTAALDPEIVREVLEVMLNLAKEGMTMLIVTHEMGFAKAVADKIIFMDEGKIIEENDP
FT                   KSFFENPKSERAKKFLNLFDYHK"
FT   gene            468269..468344
FT                   /locus_tag="C1336_000070131"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            468269..468344
FT                   /locus_tag="C1336_000070131"
FT                   /product="tRNA-Thr"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            468394..468479
FT                   /locus_tag="C1336_000070132"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            468394..468479
FT                   /locus_tag="C1336_000070132"
FT                   /product="tRNA-Tyr"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            468486..468562
FT                   /locus_tag="C1336_000070133"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            468486..468562
FT                   /locus_tag="C1336_000070133"
FT                   /product="tRNA-Gly"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            468667..468741
FT                   /locus_tag="C1336_000070134"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            468667..468741
FT                   /locus_tag="C1336_000070134"
FT                   /product="tRNA-Thr"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            468810..470009
FT                   /locus_tag="C1336_000070038"
FT                   /note="C1336_000070038 identified by Glimmer3 with a raw
FT                   score of 11.67."
FT   CDS             468810..470009
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070038"
FT                   /product="translation elongation factor Tu"
FT                   /note="C1336_000070038 identified by Glimmer3 with a raw
FT                   score of 11.67. Gene function extrapolated from
FT                   CJJ81176_0499 (CP000538.1) after blastn alignment (99.67
FT                   percent identity over a 1200 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31331.1"
FT                   /translation="MAKEKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAELK
FT                   DYDNIDNAPEEKERGITIATSHIEYETDNRHYAHVDCPGHADYVKNMITGAAQMDGAIL
FT                   VVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLSSYDF
FT                   PGDDTPIISGSALKALEEAKAGQDGEWSAKIMDLMAAVDSYIPTPTRDTEKDFLMPIED
FT                   VFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVG
FT                   VLLRGTKKEEVIRGMVLAKPKSITPHTDFEAEVYILNKDEGGRHTPFFNNYRPQFYVRT
FT                   TDVTGSIKLADGVEMVMPGENVRITVSLIAPVALEEGTRFAIREGGKTVGSGVVSKIIK
FT                   "
FT   gene            470062..470220
FT                   /locus_tag="C1336_000070039"
FT                   /note="C1336_000070039 identified by Glimmer3 with a raw
FT                   score of 7.45."
FT   CDS             470062..470220
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070039"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070039 identified by Glimmer3 with a raw
FT                   score of 7.45. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31332.1"
FT                   /translation="MRIKVGLKCEECGDINYSTYKNSKNTTEKLELKKYCPRLKKHTLH
FT                   KEVKLKS"
FT   gene            470232..470307
FT                   /locus_tag="C1336_000070135"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            470232..470307
FT                   /locus_tag="C1336_000070135"
FT                   /product="tRNA-Trp"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            470326..470505
FT                   /locus_tag="C1336_000070040"
FT                   /note="C1336_000070040 identified by Glimmer3 with a raw
FT                   score of 5.00."
FT   CDS             470326..470505
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070040"
FT                   /product="preprotein translocase SecE subunit"
FT                   /note="C1336_000070040 identified by Glimmer3 with a raw
FT                   score of 5.00. Gene function extrapolated from C8J_0445
FT                   (CP000814.1) after blastn alignment (99.44 percent identity
FT                   over a 180 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31333.1"
FT                   /translation="MEKLITYFKLSKAELRKVIFPLKEQVRNAYITVFVVVAVISLFLA
FT                   LVDWLMSSIVSAIV"
FT   gene            470515..471048
FT                   /locus_tag="C1336_000070041"
FT                   /note="C1336_000070041 identified by Glimmer3 with a raw
FT                   score of 9.69."
FT   CDS             470515..471048
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070041"
FT                   /product="transcription antitermination protein NusG"
FT                   /note="C1336_000070041 identified by Glimmer3 with a raw
FT                   score of 9.69. Gene function extrapolated from
FT                   CJJ81176_0503 (CP000538.1) after blastn alignment (99.81
FT                   percent identity over a 534 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31334.1"
FT                   /translation="MSTHKWYAIQTYAGSEMAVKRAIENLVKDNGIEEQLKEIVVPTED
FT                   VIEFKNGKEKISERSLYSGYVFALLDLNTELWHRIQSLPKVGRFIGESKKPTPLTEKDI
FT                   NLILEKVHNRAAPKPKISFEEGENVRITEGPFANFTAIVEEYDMVRGLLKLNVSIFGRS
FT                   TPVEILYSQVEKII"
FT   gene            471074..471499
FT                   /locus_tag="C1336_000070042"
FT                   /note="C1336_000070042 identified by Glimmer3 with a raw
FT                   score of 15.88."
FT   CDS             471074..471499
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070042"
FT                   /product="50S ribosomal protein L11"
FT                   /note="C1336_000070042 identified by Glimmer3 with a raw
FT                   score of 15.88. Gene function extrapolated from C8J_0447
FT                   (CP000814.1) after blastn alignment (99.53 percent identity
FT                   over a 426 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31335.1"
FT                   /translation="MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNER
FT                   TKDMAGFNIPVVITVYADKSFTFITKQPPATDLIKKAAGISKGTDNPLKNKVGRLTRAQ
FT                   VLEIVDKKIADLNTKDRDQAAKIIAGSARSMGVEIVD"
FT   gene            471554..472255
FT                   /locus_tag="C1336_000070043"
FT                   /note="C1336_000070043 identified by Glimmer3 with a raw
FT                   score of 14.60."
FT   CDS             471554..472255
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070043"
FT                   /product="ribosomal protein L1"
FT                   /note="C1336_000070043 identified by Glimmer3 with a raw
FT                   score of 14.60. Gene function extrapolated from
FT                   CJJ81176_0506 (CP000538.1) after blastn alignment (99.72
FT                   percent identity over a 702 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31336.1"
FT                   /translation="MAKIAKRLKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIA
FT                   LKLNVDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEI
FT                   QKGNMNFDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNF
FT                   RVDKQGNIHAGLGKVSFSKEQLWDNVSTFVKAINKHKPAAAKGRYIKNAALSLTMSPSV
FT                   KLETQELLDMK"
FT   gene            472407..472877
FT                   /locus_tag="C1336_000070044"
FT                   /note="C1336_000070044 identified by Glimmer3 with a raw
FT                   score of 15.45."
FT   CDS             472407..472877
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070044"
FT                   /product="50S ribosomal protein L10"
FT                   /note="C1336_000070044 identified by Glimmer3 with a raw
FT                   score of 15.45. Gene function extrapolated from Cj0476
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 456 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31337.1"
FT                   /translation="MTRSEKVEIIAKLEEGFKASEAIVVCNYRGLSTKKLEELRNNARE
FT                   NNVKVQIVKNTLANIALNNSGKTGLVLKDTNIYLWGEDQLSVSKVAAKFEENNDKFEIK
FT                   TAHIEGEVADVAKVKALAKMPSRNELLAMLLQVWNAPITNFTIGLNALKNKK"
FT   gene            472907..473284
FT                   /locus_tag="C1336_000070045"
FT                   /note="C1336_000070045 identified by Glimmer3 with a raw
FT                   score of 22.11."
FT   CDS             472907..473284
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070045"
FT                   /product="ribosomal protein L7/L12"
FT                   /note="C1336_000070045 identified by Glimmer3 with a raw
FT                   score of 22.11. Gene function extrapolated from C8J_0450
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 92 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31338.1"
FT                   /translation="MAISKEDVLEYISNLSVLELSELVKEFEEKFGVSAAPVMVAGGAA
FT                   TGGAAAAAEEKTEFDIVLTDGGAKKIEVIKIVRALTGLGLKEAKDAVEQTPSTLKEGVA
FT                   KAEAEEAKKQLEEAGAKVELK"
FT   gene            473402..477529
FT                   /locus_tag="C1336_000070046"
FT                   /note="C1336_000070046 identified by Glimmer3 with a raw
FT                   score of 10.22."
FT   CDS             473402..477529
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070046"
FT                   /product="DNA-directed RNA polymerase, beta subunit"
FT                   /note="C1336_000070046 identified by Glimmer3 with a raw
FT                   score of 10.22. Gene function extrapolated from
FT                   CJJ81176_0509 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 275 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31339.1"
FT                   /translation="MLDNKLGNRLRVDFSNISKQIEIPNLLQLQKKSFDYFLNLDNGES
FT                   GIEKVFKSIFPIHDPQNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIRLTLHE
FT                   KDEKTGEKVGVKDIKEQEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVIFKEEES
FT                   STVANKLVYTAQIIPDRGSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGYKKQDIIK
FT                   LFYPIQTIHVKKDKFLTEFNPNDFMDRIEYDIKDEKGKIVHQAGKRLTKKKAEQLIKDG
FT                   LKWIEYPVEILLNRYLANPIIDKESGEVLFDSLTLLDESKLAKIKEQKSFDIANDLANG
FT                   VDAAIINSFAQDGETLKLLKQSENIDDENDLAAIRIYKVMRPGEPVVKDAAKAFVNDLF
FT                   FNPERYDLTKVGRMKMNHKLGLEVPEYVTVLTNEDIIKTAKYLIKVKNGKGHIDDRDHL
FT                   GNRRIRSIGELLANELHLGLAKMQKAIRDKFTSLNADLDKVMPYDLINPKMITTTIIEF
FT                   FTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVHATHYGRICPVETP
FT                   EGQNIGLINTLSTYAKVNELGFVEAPYRKVVNGKVTNEVVYLTATQEEGLFIAPASTKV
FT                   DAKGNIVEEFVEARQDGETILARREEVQLIDLCSGMVVGVAASLIPFLEHDDANRALMG
FT                   SNMQRQAVPLLTASAPIVGTGMEQIIARDAWEAVKAKRGGVVEKVDNKSIFILGEDDKG
FT                   PFIDHYTMEKNLRTNQNTNYIQHPIVKKGDIVKTGQIIADGPSMDQGELAIGKNALIAF
FT                   MPWNGYNYEDAIVVSERIIREDTFTSVHIYEKEIEARELKDGIEEITKDIPNVKEEDVA
FT                   HLDESGIAKIGTHIKPGMILVGKVSPKGEVKPTPEERLLRAIFGEKAGHVVNKSLYATA
FT                   SLEGVVVDVKIFTKKGYEKDDRAIKSYDKEKMALEKEHHDRLLMMDREEMLRVCALLSK
FT                   APLNSDQKIGDKNYKKGQTADISELEKINRFTLTTLIKAYSKEIQKEYDDLKNHFQNEK
FT                   KKLKAEHDEKLEILEKDDILPSGVIKLVKVYIATKRKLKVGDKMAGRHGNKGIVSTIVP
FT                   EVDMPYLPNGKSVDIALNPLGVPSRMNIGQILESHLGLIGLRLGDQIQEIFDRKQKDFL
FT                   KELRAKMLEICSIPRLASEKEFIKSLSDEELLNYARDWSKGVKFATPVFEGVNIEEFSK
FT                   LFEMAKIDMDGKTELYDGRTGEKIAERVHVGCMYMLKLHHLVDEKVHARSTGPYSLVTQ
FT                   QPVGGKALFGGQRFGEMEVWALEAYGAAHTLREMLTIKSDDVEGRFSAYKALTKGENVP
FT                   ATGIPETFFVLTNELKSLALDVEIFDKDEDNE"
FT   gene            477522..482075
FT                   /locus_tag="C1336_000070047"
FT                   /note="C1336_000070047 identified by Glimmer3 with a raw
FT                   score of 10.44."
FT   CDS             477522..482075
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070047"
FT                   /product="DNA-directed RNA polymerase, beta' subunit"
FT                   /note="C1336_000070047 identified by Glimmer3 with a raw
FT                   score of 10.44. Gene function extrapolated from C8J_0452
FT                   (CP000814.1) after blastn alignment (98.84 percent identity
FT                   over a 1206 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31340.1"
FT                   /translation="MSKFKVIEIKEDARPRDFEAFQLRLASPEKIKSWSYGEVKKPETI
FT                   NYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSRMG
FT                   HIELVTPVAHIWYVNSLPSRIGTLLGVKMKDLERVLYYEAYIVENSGDAFYDNESTKKV
FT                   EYCDVLNEEQYQNLMQRYENSGFKARMGGEVVRDLLANLDLVALLNQLKEEMAATNSEA
FT                   KKKTIIKRLKVVENFLNSNLNANTDSDEAVPNRPEWMMITNLPVLPPDLRPLVALDGGK
FT                   FAVSDVNDLYRRVINRNTRLKKLMELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKG
FT                   ANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELF
FT                   KPHLLAKLEEKGYATTVKQAKKMIENKTNEVWECLEEVVKGHPVMLNRAPTLHKLSIQA
FT                   FHPVLVEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSQEAIAECKVLMLSSMNILLPAS
FT                   GKSVTVPSQDMVLGIYYLSLEKAGAKGSHKICTGIDEVMMALESKCLDIHASIQTMVDG
FT                   RKITTTAGRLIIKSILPDFVPENSWNKVLKKKDIAALVDYVYKQGGLEITASFLDRLKN
FT                   LGFEYATKAGISISIADIIVPNDKQKAIDEAKKQVREIQNSYNLGLITSGERYNKIIDI
FT                   WKSTNNVLSKEMMKLVEKDKEGFNSIYMMADSGARGSAAQISQLAAMRGLMTKPDGSII
FT                   ETPIISNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKLIDVAQNVKITIEDC
FT                   GTHEGVEINEITADSSIIETLEERILGRVLAEDVIDPITNSVLFAEGTLMDEEKAKILG
FT                   ESGIKSVNIRTPITCKAKKGICAKCYGINLGEGKLVKPGEAVGIISAQSIGEPGTQLTL
FT                   RTFHSGGTASTDLQDRQVSAQKEGFIRFYNLKTYKNKKGKNIVANRRNAAILLVEPKIK
FT                   TPFKGVINIENIHEDVIVSIKDKKQEVKYILRKYDLAKPNELAGVSGSIDGKLYLPYQS
FT                   GMQVEENESIVEVIKEGWNVPNRIPFASEILVEDGEPVVQNIKAGEKGTLKFYILKGDG
FT                   LDRVKNVKKGDIVKEKGFFVVIADENDREAKRHYIPRESKIEFNDSEKIDDANTIIASA
FT                   PKKERKVIAEWDAYNNTIIAEIDGVISFEDIEAGYSADEQIDEATGKRSLVINEYLPSG
FT                   VRPTLVIAGKGDKAVRYQLEPKTVIFVHDGDKITQADILAKTPKAAAKSKDITGGLPRV
FT                   SELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIIIQAEDGTSAEYLIDKSKHIQVRDG
FT                   EFIHAGEKLTDGVVSSHDVLKILGEKALHYYLISEIQQVYRGQGVVISDKHIEVIVSQM
FT                   LRQVKVVDSGHTKFIEGDLVSRRKFREENERIIRMGGEPAIAEPVLLGVTRAAIGSDSV
FT                   ISAASFQETTKVLTEASIAGKFDYLEDLKENVILGRMIPVGTGLYGEQNLKLKEQE"
FT   gene            complement(482106..482867)
FT                   /locus_tag="C1336_000070048"
FT                   /note="C1336_000070048 identified by Glimmer3 with a raw
FT                   score of 11.38."
FT   CDS             complement(482106..482867)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070048"
FT                   /product="transcriptional regulator, IclR family"
FT                   /note="C1336_000070048 identified by Glimmer3 with a raw
FT                   score of 11.38. Gene function extrapolated from CJE0530
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 129 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31341.1"
FT                   /translation="MHQPTLRVLNILELLAKEKLTLSAIAKKLNIPAGTLWPILQTLQE
FT                   KKYIKCDLKNKSYYLDFKIIELGCNIKNENNIFEIIKKHMKNIRNLTNQTCQMGILKDG
FT                   NVLYLEKIDANNTVQLKSFIGTSYPAYATSLGKALLSNKNKKELEKLYPKNFDKITENT
FT                   LNNINELYQQIKQIKKEKIAIEIGEMNPQIECMAIGIEHKNKIIAAISISYLIYCSNKA
FT                   FREKNKKILLEEKNKIEKVLKIYFNDLDTLY"
FT   gene            483099..484010
FT                   /locus_tag="C1336_000070049"
FT                   /note="C1336_000070049 identified by Glimmer3 with a raw
FT                   score of 15.01."
FT   CDS             483099..484010
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070049"
FT                   /product="putative dihydrodipicolinate synthase"
FT                   /note="C1336_000070049 identified by Glimmer3 with a raw
FT                   score of 15.01. Gene function extrapolated from
FT                   JJD26997_1453 (CP000768.1) after blastn alignment (94.70
FT                   percent identity over a 905 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31342.1"
FT                   /translation="MGILKGTLPALLTPYKDDGSINEKEFIHYCEFGISKGLNGLFCNG
FT                   SAGDSQALSVEEQVKLMKLTKEAAKNNVPIITGIASTIYQNTFTLAQKAHELDLDALLL
FT                   AMPYYYKLSEDALFEYVKDLSSKVKLPLYVYNIPLFAPALSLKFIEKVSKLDNVVGIKD
FT                   SSGDALLLNHILDVVPSDFDVFVGREEFYAGALLAGAKGSMTSIGGVFPELMSEIYKSI
FT                   NEKNIDRALLIQKSLLKAIRFGMSMAFPMGFALLLKARGFEFSNASIHPLSPTTKEELN
FT                   TRFDEAKELIKTIEKETGIKLN"
FT   gene            484062..484988
FT                   /locus_tag="C1336_000070050"
FT                   /note="C1336_000070050 identified by Glimmer3 with a raw
FT                   score of 9.43."
FT   CDS             484062..484988
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070050"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070050 identified by Glimmer3 with a raw
FT                   score of 9.43. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31343.1"
FT                   /translation="MLIPMLIGAIIHTFWPNILAYFGPFTNALGTGATVIIAVWFVGIG
FT                   ASVKLKATTTVLKKSGILLATKMFAAFLACIIVQKLIPQGMVSNGLFAGFSALAVVAAM
FT                   DMTNAGLYTALTKQYGTTEEAGASLLLMIESGPLFTMIILGTTGLASFPLQNFIGLILP
FT                   FLLGFILGNLDEEFRVFLTKLNEPMIIFLGFSLGSTISLHSIYEAGIAGLILAFSVIVF
FT                   TGFFLILADIFLAKGNGTAGIAASSTAGAAAATPMLIAQLYPELREQADYATVLVSTCV
FT                   VITAFVVPILTSYYAKWAKTHINKGKL"
FT   gene            484985..485248
FT                   /locus_tag="C1336_000070051"
FT                   /note="C1336_000070051 identified by Glimmer3 with a raw
FT                   score of 16.52."
FT   CDS             484985..485248
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070051"
FT                   /product="putative altronate hydrolase"
FT                   /note="C1336_000070051 identified by Glimmer3 with a raw
FT                   score of 16.52. Gene function extrapolated from Cj0482
FT                   (AL111168.1) after blastn alignment (94.66 percent identity
FT                   over a 262 bp alignment).; putative altronate hydrolase
FT                   N-terminus"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31344.1"
FT                   /translation="MKGYIIVNEKDNVATALRDFKKGENVANIELLNDIASGHKFALKD
FT                   IKKDEIIIKYAEAIASASCDISAGEWVHIHNTAGIRGRGDKE"
FT                   /artificial_location="low-quality sequence region"
FT   gene            485251..486417
FT                   /locus_tag="C1336_000070052"
FT                   /note="C1336_000070052 identified by Glimmer3 with a raw
FT                   score of 14.69."
FT   CDS             485251..486417
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070052"
FT                   /product="putative altronate hydrolase"
FT                   /note="C1336_000070052 identified by Glimmer3 with a raw
FT                   score of 14.69. Gene function extrapolated from Cj0483
FT                   (AL111168.1) after blastn alignment (94.86 percent identity
FT                   over a 1167 bp alignment).; putative altronate hydrolase
FT                   C-terminus"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31345.1"
FT                   /translation="MKKIMGYRREDGKFGLRNKVIIIPSVHCANKVCENIARKCNGAVY
FT                   INHQHGCSQLEFDALQTRDVLIGHGTNANVFGVLIVGLGCEVIQAKVVAEKIKEATPYK
FT                   KVEYLVIQECGGSKNTIENGIKIVNEMLESAAKLQKSEGDFSDLILGTECGGSDSYSGL
FT                   SANPALGSLSDFVIDEGGAVILAETTELIGCEAILAKRAKNDEIAKKVYDKILGYENLV
FT                   KSFHADIRGANPSPGNIVGGLSTIEEKSLGCVYKAGTRTLMDVIDYAKPVVSKGLTFMN
FT                   TPGNDIEQLSAMVAGGANICVFTTGRGTPTGSAIVPTIKMSSNTFCYENMNDAIDINAG
FT                   SIIDGVKTKEEVRDELVELIVRISNGELVKAEINEQNDFSVWRLATTC"
FT                   /artificial_location="low-quality sequence region"
FT   gene            486487..487713
FT                   /locus_tag="C1336_000070053"
FT                   /note="C1336_000070053 identified by Glimmer3 with a raw
FT                   score of 10.89."
FT   CDS             486487..487713
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070053"
FT                   /product="putative MFS (Major Facilitator Superfamily)
FT                   transport protein"
FT                   /note="C1336_000070053 identified by Glimmer3 with a raw
FT                   score of 10.89. Gene function extrapolated from Cj0484
FT                   (AL111168.1) after blastn alignment (94.50 percent identity
FT                   over a 491 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31346.1"
FT                   /translation="MPLIVLMFCLSMLDRTNISFVKSHIEIDAGIGEAAYALGAGIFFV
FT                   GYALFEVPSNLLLHKLGAKIWLSRIMITWGLVTMAMIFIQGETSFYVLRFLLGLTEAGF
FT                   SPGIILYLSYFFPAIYRSKAYGIYQMGVPIAFVFGSLISGFILDYAPNMYFKNWQWMFL
FT                   IEGGITVLVGVFCLFYLDSHPKYAKWLDVKEKAVLLKNIEICNSKAKDYSIKDIFKSIL
FT                   VWKFVFIYFCIQLSVYGVLFYLPSKIAQILQINVGFEVGLLNAIPWIFVFIALPIFTSL
FT                   ADKKRSWNLYAILFLLLASLSMIASTFVANLAPFLFFISLAAIGFIVIQPIFWNLPTQV
FT                   LKGKGGAAAIALIGSLGNLGGFVAPTLKTYIENHFGVEFGLIVLALIAILGVLVLVHLK
FT                   MTLNLDKGE"
FT   gene            487714..488502
FT                   /locus_tag="C1336_000070054"
FT                   /note="C1336_000070054 identified by Glimmer3 with a raw
FT                   score of 15.64."
FT   CDS             487714..488502
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070054"
FT                   /product="oxidoreductase, short chain
FT                   dehydrogenase/reductase family"
FT                   /note="C1336_000070054 identified by Glimmer3 with a raw
FT                   score of 15.64. Gene function extrapolated from
FT                   JJD26997_1449 (CP000768.1) after blastn alignment (92.99
FT                   percent identity over a 785 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31347.1"
FT                   /translation="MDLKIKNKICIITGGAKGIGYGIAKLWAMEGGIPVVFSRSMPKEH
FT                   DEELKNLCKSYEFYEIDLKNYEQIEELVKKVATKHGGIYALVNNAGANDNLHIENTSTK
FT                   DLIKSYENNLFHYYAMAKECLPYIKKEQGSILNIVSKTGITGQGRTSAYASAKAAQIGF
FT                   TREWACAFAKDSVRVNAIAPAEVMTPLYEKWLQNFPNPKEQYEKIAKAIPLGHRFTTIE
FT                   EIANTAVFTLSPLASHTTGQILMPDGGYVHLDRALNWDEN"
FT   gene            488512..489768
FT                   /locus_tag="C1336_000070055"
FT                   /note="C1336_000070055 identified by Glimmer3 with a raw
FT                   score of 13.35."
FT   CDS             488512..489768
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070055"
FT                   /product="L-fucose permease"
FT                   /note="C1336_000070055 identified by Glimmer3 with a raw
FT                   score of 13.35. Gene function extrapolated from CJE0536
FT                   (CP000025.1) after blastn alignment (98.99 percent identity
FT                   over a 296 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31348.1"
FT                   /translation="MTDSKNIKVAIVLVTSLFFLWGVSYGLIDVMNKNFQNHLHISQHE
FT                   SGFLQFAYFGAYFIIALPAGYIANRFSYKMGIIFGLALYAIGALLIIPATNLASFHLFL
FT                   FAFFILACGIGSLETSANPYMTKLGDEKNASFRINAAQSFNGLGQFVGPIIGGALFLSI
FT                   TKQEEGASAEQIEAALVANMGNVQLVYIGIAVIVILILIAFVANKLPEGSAVSDDYKQK
FT                   DDSKPIYVFKHRHFNLGLLAQFLYIANQVVAGAFFINYVVEHNEGLKDAQGAYYFSIAL
FT                   VAFMLGRIVSTPLMKIIKGEKILGFYSLINVLICFSLYFASGFFSIVLLIALFFFMSIS
FT                   FPTIFAVATKNLPLNQVKLGGSLLVMSIVGGAIMPIIIGFINDHYGTGTGYLAMAPLFL
FT                   YVSWYGFIGSKVRKNAKDF"
FT   gene            489752..490546
FT                   /locus_tag="C1336_000070056"
FT                   /note="C1336_000070056 identified by Glimmer3 with a raw
FT                   score of 12.08."
FT   CDS             489752..490546
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070056"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070056 identified by Glimmer3 with a raw
FT                   score of 12.08. Gene function extrapolated from
FT                   JJD26997_1447 (CP000768.1) after blastn alignment (95.92
FT                   percent identity over a 294 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31349.1"
FT                   /translation="MQKIFDAHLHLWDLEKIPISWIKDDEKLEQNYDFFRMKQEYKEFE
FT                   FIGAMYVETNSDDLEKEALFALEQKKLHNLLLCLADLKHKEELNSFREVMHVSKKGAKR
FT                   LFEVDFEEKIEILKTFNISFEACMKNEELSFLEKFLNKNPNLKVVLNHLGSPKMDRLNE
FT                   YKKDLILLKKFPNLYIKLSVADDFSEQTPKEFIYDLFTFLKENFSEDKFIFGSNYPVAK
FT                   IAPAKWAKLIIESKIFDDLDKIFYKNALLIYKEDRCKDMVKS"
FT   gene            490522..490839
FT                   /locus_tag="C1336_000070057"
FT                   /note="C1336_000070057 identified by Glimmer3 with a raw
FT                   score of 9.51."
FT   CDS             490522..490839
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070057"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070057 identified by Glimmer3 with a raw
FT                   score of 9.51. Gene function extrapolated from
FT                   JJD26997_1446 (CP000768.1) after blastn alignment (98.45
FT                   percent identity over a 258 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31350.1"
FT                   /translation="MQRYGQIIKIKKEKIEEYKNLHAKPYEGVCEMIKECNIQNYSIYL
FT                   FGEYLFAYFEYVGADFEADMAKMIRDENTQKWWKVTDPCQISLGYAGQKWLNMEEVFHL
FT                   D"
FT   gene            490853..492292
FT                   /locus_tag="C1336_000070058"
FT                   /note="C1336_000070058 identified by Glimmer3 with a raw
FT                   score of 12.28."
FT   CDS             490853..492292
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070058"
FT                   /product="aldehyde dehydrogenase"
FT                   /note="C1336_000070058 identified by Glimmer3 with a raw
FT                   score of 12.28. Gene function extrapolated from
FT                   JJD26997_1445 (CP000768.1) after blastn alignment (96.60
FT                   percent identity over a 1440 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31351.1"
FT                   /translation="MTIYLNYIDGEFIPHNGDFIEVLNPAAKEVISKVASASLEDAKRA
FT                   IEAAKKAQKSWEAKPAIERANHLREIASLIRKNANFLTEILMQEQGKTRALASVEVNFT
FT                   ADYMDYTAEWARRYEGKIIQSDRANEHIYLYKSAIGVIGGILPWNFPFFLIARKMAPAL
FT                   LTGNTIVIKPSSETPNNAFEFAKLVSQSSLPKGVFNLVAGKGSVVGHELSSNENIGMVS
FT                   LTGSVEAGARVMEAAAKNIIKVSLELGGKAPAIVCKDADIDLAVEAIKASRICNNGQVC
FT                   NCAERAYVHTSIYDEFVDKFVKAMSKVSVGNTLKGDFDMGPLVNQAGVDNALAMLQRAS
FT                   AKGSVVECGGKITDTSGYYFPASVLTNVKHEDEIMQKEIFAPILPIAKFDTLDEAIDMA
FT                   NDCEYGLTSSIYTQNLDIAMRASREIKFGETYINRENFEAMQGFHAGFRKSGIGGADGK
FT                   HGLEEYLATHVVYLQYNTNKQ"
FT   gene            492620..493006
FT                   /locus_tag="C1336_000070059"
FT                   /note="C1336_000070059 identified by Glimmer3 with a raw
FT                   score of 10.88."
FT   CDS             492620..493006
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070059"
FT                   /product="ribosomal protein S12"
FT                   /note="C1336_000070059 identified by Glimmer3 with a raw
FT                   score of 10.88. Gene function extrapolated from
FT                   CJJ81176_0511 (CP000538.1) after blastn alignment (99.22
FT                   percent identity over a 387 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31352.1"
FT                   /translation="MPTINQLVRKERKKVLEKSKSPALKNCPQRRGVCTRVYTTTPKKP
FT                   NSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDT
FT                   AGVAKRTVSRSKYGAKRPKAGAAK"
FT   gene            493076..493546
FT                   /locus_tag="C1336_000070060"
FT                   /note="C1336_000070060 identified by Glimmer3 with a raw
FT                   score of 14.29."
FT   CDS             493076..493546
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070060"
FT                   /product="ribosomal protein S7"
FT                   /note="C1336_000070060 identified by Glimmer3 with a raw
FT                   score of 14.29. Gene function extrapolated from
FT                   CJJ81176_0512 (CP000538.1) after blastn alignment (98.51
FT                   percent identity over a 471 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31353.1"
FT                   /translation="MRRRKAPVREVLPDPIYGNKVITKFINSLMYDGKKSTATTIMYGA
FT                   LEAIDKKGGEKKGIDIFNDAIENIKPLLEVKSRRVGGATYQVPVEVRPARQQALAIRWI
FT                   ISFARKRSERTMIDKLAAELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW"
FT   gene            493559..495634
FT                   /locus_tag="C1336_000070061"
FT                   /note="C1336_000070061 identified by Glimmer3 with a raw
FT                   score of 10.43."
FT   CDS             493559..495634
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070061"
FT                   /product="elongation factor EF-G"
FT                   /note="C1336_000070061 identified by Glimmer3 with a raw
FT                   score of 10.43. Gene function extrapolated from C8J_0455
FT                   (CP000814.1) after blastn alignment (98.64 percent identity
FT                   over a 2058 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31354.1"
FT                   /translation="MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVHD
FT                   GAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGAVA
FT                   VFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPVPLQ
FT                   IPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEAVSET
FT                   SDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVVAYLPA
FT                   PDEVANIKGEYEDGTEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCLESGSYA
FT                   YNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEKDKVILER
FT                   MDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLE
FT                   IIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEP
FT                   GSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVYDGSYHEVDSS
FT                   EMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNKRRGQVNSMDER
FT                   GGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVADEIIKKRNG"
FT   gene            495663..495739
FT                   /locus_tag="C1336_000070136"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            495663..495739
FT                   /locus_tag="C1336_000070136"
FT                   /product="tRNA-Arg"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            495757..495906
FT                   /locus_tag="C1336_000070062"
FT                   /note="C1336_000070062 identified by Glimmer3 with a raw
FT                   score of 8.74."
FT   CDS             495757..495906
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070062"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070062 identified by Glimmer3 with a raw
FT                   score of 8.74. Gene function extrapolated from C8J_0456
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 106 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31355.1"
FT                   /translation="MIKIAFFITFVISFLTAQSPVNFKEDNNITKEQNIFKEQPPKRIK
FT                   IPTH"
FT   gene            495912..496613
FT                   /locus_tag="C1336_000070063"
FT                   /note="C1336_000070063 identified by Glimmer3 with a raw
FT                   score of 10.94."
FT   CDS             495912..496613
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070063"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070063 identified by Glimmer3 with a raw
FT                   score of 10.94. Gene function extrapolated from C8J_0457
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 261 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31356.1"
FT                   /translation="MSDLITLAQLSQGYRYNSDSLILADFILKQGIKGAVFDVGAGCGI
FT                   IGILLKKNIANLSLSLIDIQKENIKLIEKNLKSNQIQGDIFHDDFNQFQSIKKFDFIVC
FT                   NPPFYRQGAYKSEDQHKAISKFQEFLPLHSFLTKANSMLKPNGTLYFCYEALALDEICF
FT                   ILKDMKIKITKLCFVHTHQNKKARLVLIQVKKGSKSPCEILPPFFVYENEILSKQMQEI
FT                   HLRFRLKSYDI"
FT   gene            496603..496977
FT                   /locus_tag="C1336_000070064"
FT                   /note="C1336_000070064 identified by Glimmer3 with a raw
FT                   score of 10.85."
FT   CDS             496603..496977
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070064"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070064 identified by Glimmer3 with a raw
FT                   score of 10.85. Gene function extrapolated from
FT                   CJJ81176_0517 (CP000538.1) after blastn alignment (98.93
FT                   percent identity over a 375 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31357.1"
FT                   /translation="MIFDKNFSYAFDENACEKCGGKCCTGESGNIFASMEELEALRKHL
FT                   NLENKEFAEKYLRKVGFKMSFKEVEFEDGFACIFFDTQKRNCSIYDFRPKQCRTFPFWE
FT                   YFKTHQKELEKECIGICYLS"
FT   gene            496950..498227
FT                   /locus_tag="C1336_000070065"
FT                   /note="C1336_000070065 identified by Glimmer3 with a raw
FT                   score of 13.40."
FT   CDS             496950..498227
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070065"
FT                   /product="putative lipoprotein"
FT                   /note="C1336_000070065 identified by Glimmer3 with a raw
FT                   score of 13.40. Gene function extrapolated from C8J_0459
FT                   (CP000814.1) after blastn alignment (98.67 percent identity
FT                   over a 1278 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31358.1"
FT                   /translation="MYRYLLFVLVAFFLAACGSSKINVVYPDYTKYKSNDFDLRVMKAY
FT                   NYEYYKQYKEARDEFLSLYQDYNNANFLENAFLLTLANNLDKQAELNNLAKPYLNQNDN
FT                   LKRLSALYALNSNDINNAQKLMKELLTKKDSDPRNLELYGDILVKKNDLKNATKYYRSA
FT                   YNQVQNEEILFKLIGIYAILNDTLNIKNVLEFSRKTNGCTLKTCVLLAKIYFDEKNIEA
FT                   LKSIYKELYQLTKNKSFALALVELLNSQGKTEEALKISLKYDLDDDIKLALYQNLKRFD
FT                   DAKKMSLALYHKTKNKEYLLRAAVFEFEAANEAKKITPKVIDSVKEKFEQAIDKDSNAL
FT                   YLNYYGYLLIDYDLDVKKGIELVKLALEKDPQNLYYLDSLAWGYYKLGNCKQAWEILKQ
FT                   TLDDKEFANSDESKAHIKAIKACVKP"
FT   gene            498224..499000
FT                   /locus_tag="C1336_000070066"
FT                   /note="C1336_000070066 identified by Glimmer3 with a raw
FT                   score of 16.25."
FT   CDS             498224..499000
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070066"
FT                   /product="indole-3-glycerol phosphate synthase"
FT                   /note="C1336_000070066 identified by Glimmer3 with a raw
FT                   score of 16.25. Gene function extrapolated from
FT                   CJJ81176_0519 (CP000538.1) after blastn alignment (99.02
FT                   percent identity over a 716 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31359.1"
FT                   /translation="MILDKIFEKTKEDLKERKLKLPYDMLGRSLASNPFFPKDVIKALK
FT                   RVEKEVKIIAEVKKASPSKGVIREDFDPLSIALNYEKNKAAAISVLTEPHFFKGSLEYL
FT                   SLIRRYTQIPLLRKDFIFDEYQILEALVYGADFVLLIAKMLSMKELKKLLEFARHLGLE
FT                   ALVEIHDKEDLSKAIFAGADIIGINHRNLEDFTMDMSLCEKLIPQIPNSKIIIAESGLE
FT                   NKEFLEHLQNLGVDAFLIGEYFMREGDEGKALKALL"
FT   gene            499010..499495
FT                   /locus_tag="C1336_000070067"
FT                   /note="C1336_000070067 identified by Glimmer3 with a raw
FT                   score of 10.26."
FT   CDS             499010..499495
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070067"
FT                   /product="Hit family protein"
FT                   /note="C1336_000070067 identified by Glimmer3 with a raw
FT                   score of 10.26. Gene function extrapolated from
FT                   JJD26997_1435 (CP000768.1) after blastn alignment (97.90
FT                   percent identity over a 429 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31360.1"
FT                   /translation="MQYLYAPWRSEYFEKEKTVCPFCDCTNKIKSDKELGVIFRAKHCF
FT                   GVMNRYPYSAGHFMVIPYVHEEHIENLSDEIWQEMSHFVRLGVKILKEQIHANGVNIGM
FT                   NLSKDAGAGIAFHCHYHLVPRWAGDTNFITTIGETRVCGTNIEQVYQKLVLAFKNAQ"
FT   gene            499485..500483
FT                   /locus_tag="C1336_000070068"
FT                   /note="C1336_000070068 identified by Glimmer3 with a raw
FT                   score of 11.87."
FT   CDS             499485..500483
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070068"
FT                   /product="putative ATP/GTP binding protein"
FT                   /note="C1336_000070068 identified by Glimmer3 with a raw
FT                   score of 11.87. Gene function extrapolated from C8J_0462
FT                   (CP000814.1) after blastn alignment (98.01 percent identity
FT                   over a 653 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31361.1"
FT                   /translation="MLSEVEFTEFQKENFSLLIDARSPREFLHSHLIGALNFYALNDEE
FT                   YQEIGTIYKKNQALAKARGASYICQNTAKHILEITQNFRIGEKVGIYCSRGGLRSKSIA
FT                   VILSELGFRVVRLKGGFKAYRTFVTRYFENEINFDFFALCGNTGCGKTELLEQLPQAIN
FT                   LEKMANHLGSSFGDILGKQPTQKAFEAELFHNMQNLENFAFIESESRKIGDIILPLKFY
FT                   EKMQKAFKIYCFCSLENRVKRIQKIYQEKMTPLKFQQCVQKISPYISLNLRQELLQSYE
FT                   KKEWQKLIVMLLEYYDKTYKKPDKIDFELNTDDILKAQEELLDHFKAQLLF"
FT   gene            500820..501065
FT                   /locus_tag="C1336_000070069"
FT                   /note="C1336_000070069 identified by Glimmer3 with a raw
FT                   score of 9.79."
FT   CDS             500820..501065
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070069"
FT                   /product="ammonium transporter"
FT                   /note="C1336_000070069 identified by Glimmer3 with a raw
FT                   score of 9.79. Gene function extrapolated from
FT                   JJD26997_1432 (CP000768.1) after blastn alignment (94.92
FT                   percent identity over a 118 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31362.1"
FT                   /translation="MTPALAMFYLGMVRSKNTFNTIMNCFIVFSVIALQWVVLGFSLSF
FT                   GKDEGLWLVGNFENFLLEGISGYNASGVLNILFVIF"
FT   gene            501069..501362
FT                   /locus_tag="C1336_000070070"
FT                   /note="C1336_000070070 identified by Glimmer3 with a raw
FT                   score of 12.04."
FT   CDS             501069..501362
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070070"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070070 identified by Glimmer3 with a raw
FT                   score of 12.04. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31363.1"
FT                   /translation="MFALIASDIITGSLVGRIKLGVLVIFLLFWSTLFYDVLVHMIRSS
FT                   EGFLLKRGSLDFTGDGVVHIGSGVAGLVGALMVGAGKSDDEDKNAHSILMLS"
FT   gene            501511..501651
FT                   /locus_tag="C1336_000070071"
FT                   /note="C1336_000070071 identified by Glimmer3 with a raw
FT                   score of 11.80."
FT   CDS             501511..501651
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070071"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070071 identified by Glimmer3 with a raw
FT                   score of 11.80. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31364.1"
FT                   /translation="MKKPTILGGLSGLVGITPACGYVDIYASLVIGALSFCILLFWFEF
FT                   Y"
FT   gene            501638..501775
FT                   /locus_tag="C1336_000070072"
FT                   /note="C1336_000070072 identified by Glimmer3 with a raw
FT                   score of 8.70."
FT   CDS             501638..501775
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070072"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070072 identified by Glimmer3 with a raw
FT                   score of 8.70. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31365.1"
FT                   /translation="MSFIKYKLKWDDSLDTFSLHGIGGVWGGIATGLFASAKVNPNVIA
FT                   "
FT   gene            501768..501887
FT                   /locus_tag="C1336_000070073"
FT                   /note="C1336_000070073 identified by Glimmer3 with a raw
FT                   score of 6.35."
FT   CDS             501768..501887
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070073"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070073 identified by Glimmer3 with a raw
FT                   score of 6.35. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31366.1"
FT                   /translation="MLKMRLARFFISGSLELLKEQILAIMICMFFSSHKLYYF"
FT   gene            complement(502054..502971)
FT                   /locus_tag="C1336_000070074"
FT                   /note="C1336_000070074 identified by Glimmer3 with a raw
FT                   score of 11.18."
FT   CDS             complement(502054..502971)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070074"
FT                   /product="ferrochelatase"
FT                   /note="C1336_000070074 identified by Glimmer3 with a raw
FT                   score of 11.18. Gene function extrapolated from C8J_0467
FT                   (CP000814.1) after blastn alignment (99.01 percent identity
FT                   over a 405 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31367.1"
FT                   /translation="MKLVLFLNMGGATNLQDCEVFLKNMFNDPYILGIKNRFLRKFVAW
FT                   IITKARVKAMQENYRKMGGKSPLNELTQSLCNKLNLKQDEFKFDFVNLYVPPFATEILQ
FT                   KYTLNENDEIILFPLYPHHSCTTVTSSLEVLQNEISKQKIQAKVKTIDIFYKNELYNEM
FT                   IVSHILDKKSKFDAKILIFSAHSLPQSIIDKGDLYEKHVNNHVEILKEKLKDHFDEFIL
FT                   AYQSKLGPVKWLEPNTSDILANLNDKALIYPISFCIDCSETIFELGMEYKHLAKCDYDL
FT                   ISCPNDSDEFMEFILKYLSDLNQE"
FT   gene            complement(502968..503834)
FT                   /locus_tag="C1336_000070075"
FT                   /note="C1336_000070075 identified by Glimmer3 with a raw
FT                   score of 9.30."
FT   CDS             complement(502968..503834)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070075"
FT                   /product="oxidoreductase, Gfo/Idh/MocA family"
FT                   /note="C1336_000070075 identified by Glimmer3 with a raw
FT                   score of 9.30. Gene function extrapolated from
FT                   CJJ81176_0532 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 88 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31368.1"
FT                   /translation="MKIGIIGLGKMGQNHLNELSKNSHFKLNALFDLCKNPNLNIFDDI
FT                   FYDDLDKFLNQNNDIIIIATPTNSHLAIAKKIFKQCKCVLIEKPLALNLKEIDEISNLA
FT                   KEYSVKVGVGFCERFNPAVLALKKELENEEIISINIQRFSPYPQRIGDVGILQDLAVHD
FT                   LDLLCFLSKQEITKTNLLKKYTQDQTRESESIILCGLEKCIASIHQSWNSTQKLRKIHL
FT                   ITKNHFYEANLNDFSLLKDGNFIELTQQSPLFSEHEALLKLIDNQPNHLASTSDAYKVQ
FT                   EILERFA"
FT   gene            complement(503839..504912)
FT                   /locus_tag="C1336_000070076"
FT                   /note="C1336_000070076 identified by Glimmer3 with a raw
FT                   score of 11.15."
FT   CDS             complement(503839..504912)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070076"
FT                   /product="DegT/DnrJ/EryC1/StrS aminotransferase family"
FT                   /note="C1336_000070076 identified by Glimmer3 with a raw
FT                   score of 11.15. Gene function extrapolated from C8J_0469
FT                   (CP000814.1) after blastn alignment (98.36 percent identity
FT                   over a 733 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31369.1"
FT                   /translation="MNFINLQAQYLAYKNEINAEIESILSSSSFIGGAKLNEFEQNLAH
FT                   FLGVKHAIGCSSGTSALYLALRALDIGKDDEVIVPSFTFIATAEVVALTGAKPVFVDIN
FT                   LSNYNLDFEAVQKAITPKTKAVIAVSMFGQMSDLRALEEILKDKNITLIEDGAQSFGAS
FT                   FKGEKSCSIAKISCTSFFPSKPLGAYGDGGAIFCHDDEIAKKIRILLNHGQTQRYKHEF
FT                   IGINGRLDTLQAAILNVKLKYLEKELDKRQKLAQTYNANLKNCQIPQIDPNAFSAYAQY
FT                   SVLVEDRASVLQKFEKTNIPYAIHYPTPLHKQPCFSEFSNLELKNSEYASKHILSLPFS
FT                   PFLSEEEQEQVICIFKD"
FT   gene            505027..507555
FT                   /locus_tag="C1336_000070077"
FT                   /note="C1336_000070077 identified by Glimmer3 with a raw
FT                   score of 13.12."
FT   CDS             505027..507555
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070077"
FT                   /product="alanyl-tRNA synthetase"
FT                   /note="C1336_000070077 identified by Glimmer3 with a raw
FT                   score of 13.12. Gene function extrapolated from
FT                   JJD26997_1429 (CP000768.1) after blastn alignment (98.17
FT                   percent identity over a 327 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31370.1"
FT                   /translation="MDIRKAYLDFFASKGHEVTPSSPLVPDDATLLFTNAGMVPFKSIF
FT                   TGEIPRPNPPRKTSCQTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQAIA
FT                   YAWEFVTEVLKLPKDRLYVTVHENDDEAFNLWQKHIQKERIYKFGDKDNFWQMGDTGPC
FT                   GPCSEIFYDQGEEHFNSSEDYMGGDGDRFLEIWNLVFMQYERSADGVLSPLPKPSIDTG
FT                   MGLERVTAIKEGKFSNFDSSLFMPIINEISKLCNKTYIYESGASFRVIADHIRSSVFLL
FT                   AQGVSFDKEGRGYVLRRILRRALRHGYLLGFKQAFMYKLVDVVCDLMGGHYTYLNEKKD
FT                   FIKEQIRLEEERFLSTIENGIEIFNEELKNTKEIFSGEVAFKLYDTYGFPLDLTADMLR
FT                   EKNLKVDEEKFELLMNEQKARAKASWKGSGDKTASGDFKNLLEKFGENHFVGYEKAECE
FT                   SKILALLDEEFKEVSTLKDAGWVMLENTPFYATSGGQSADSGFIAKREVLDTQKFFNLN
FT                   LSFIKAGEELKVGDIVHAKIDTEKREQIARHHSATHLLHHALREILGSHVSQAGSLVES
FT                   NKLRFDFTHHKALSKEELESIEKRVNEMIINSSEAILENMPLEEAKKSGAIALFNEKYQ
FT                   GNVRVLTLGESKELCGGTHVKNTAQIGSFYIVKESGVSAGVRRIEAVVSKAALEFVKNQ
FT                   LEELSKAKDELKNNDILSGLKKLKNEILSLKNELKNSSKTELDSKNIQGVEICVKRVDN
FT                   GDIKAMIDDFKNKFAKAVILLIQVKDEKITLAAGVKDVPLKAGALVKEAAQILGGNGGG
FT                   RDDFATAGGKDLNKIDEALKQSLETIEKAL"
FT   gene            507555..508106
FT                   /locus_tag="C1336_000070078"
FT                   /note="C1336_000070078 identified by Glimmer3 with a raw
FT                   score of 14.96."
FT   CDS             507555..508106
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070078"
FT                   /product="maf protein, putative"
FT                   /note="C1336_000070078 identified by Glimmer3 with a raw
FT                   score of 14.96. Gene function extrapolated from
FT                   CJJ81176_0535 (CP000538.1) after blastn alignment (99.32
FT                   percent identity over a 148 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31371.1"
FT                   /translation="MLILASSSISRANLLKTAKIDFRQVSFDYDENLNKNISPFLYVQK
FT                   IVLEKEKQFLSALGKDFQNQNLLFADSIVCIDEKILTKAKDKKEAYEMLALQNGKYASI
FT                   LSAFLLVKPEKRVFSLSKTTLYFKNFDENALRDYVENDLYKGKAGCIMCEGFHQNFITQ
FT                   QVGNLSTALGLDIQTLKAYL"
FT   gene            508103..510034
FT                   /locus_tag="C1336_000070079"
FT                   /note="C1336_000070079 identified by Glimmer3 with a raw
FT                   score of 12.95."
FT   CDS             508103..510034
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070079"
FT                   /product="penicillin-binding protein 1A"
FT                   /note="C1336_000070079 identified by Glimmer3 with a raw
FT                   score of 12.95. Gene function extrapolated from C8J_0472
FT                   (CP000814.1) after blastn alignment (98.65 percent identity
FT                   over a 1855 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31372.1"
FT                   /translation="MKILKYIFSFFTLLFIAGFIYVAYLFTSADTEGYTFKEYKPPLTT
FT                   QIYDRNGKLVANIFEQHRFYAPYEELPSRLIEALVAIEDTSFFEHNGVNIDAIFRAAVK
FT                   IIKSGGKTMEGASTLTQQFIKNTELTPERTITRKIREALLAYKMETILTKEQILERYLN
FT                   FIFFGHGYYGVKTAALGYFHKNLNELSLKEIAMLVGMPKAPSSYDPTKHLDLSISRANN
FT                   VISRMYNLGWISKTDYDTAIKEIPQVYDDTLTQNAAPYVVDEVIKQLSPSIKDLKTGGY
FT                   KIILNIDLDVQNMAQNALKFGYDEIVKRDKDANLSTLNGAMVVVNHQSGDVLALVGGVD
FT                   YEKSNYNRATQSMRQPGSSFKPFVYQVAINLGYSPMSEIADISRIFEGGAGNNEDWKPK
FT                   NEGGKFLGLITLKEALTRSRNLATINLALDMGLDVLYSKLMEFGFKDIPPNLSIVLGSF
FT                   GISPLEYSKFYTMFGNYGIIKDPQIIRQVQDKTGKTIMEFNSNERKVSNEAQSFLVLDM
FT                   MRNVVEKGTGRNARVKDIEIAGKTGTTNKSVDAWFCGLTPEIEAIIWYGNDNNKPMRYT
FT                   EGGARTAAPVFREFLTQYIEKFPDTTRKFSIPNGVYRGNYKGESAYYTTKSPLPKANMK
FT                   FNESEIIF"
FT   gene            complement(510062..512635)
FT                   /locus_tag="C1336_000070080"
FT                   /note="C1336_000070080 identified by Glimmer3 with a raw
FT                   score of 13.43."
FT   CDS             complement(510062..512635)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070080"
FT                   /product="ATP-dependent chaperone protein ClpB"
FT                   /note="C1336_000070080 identified by Glimmer3 with a raw
FT                   score of 13.43. Gene function extrapolated from
FT                   CJJ81176_0537 (CP000538.1) after blastn alignment (98.52
FT                   percent identity over a 674 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31373.1"
FT                   /translation="MANIQDFLTDNMLSNLESAASLAIHSKNTEVVSLHLLWALSVDST
FT                   SILNQILNKLNISKEALELEIKSRISKLATSSNVSRENIRFSNELINSLENAKGLMSAN
FT                   GDSYLSVDTWLISESQKSPIKEILAQFLDLREFQKELESLRAGRKIDSKTSDETLDSLN
FT                   KFGIDLTLKASEGKLDPVIGREEEIERLMQILIRKTKNNPILLGEPGVGKTAIVEALAQ
FT                   RIIKKDVPKSLQNKKVIALDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILFIDEIH
FT                   TIVGAGASEGSMDAANILKPALARGELHTIGATTLKEYRKYFEKDAALQRRFQPVNVGE
FT                   PSVNEALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYIADRFLPDKAIDLIDEAAA
FT                   ELKMQIESEPSSLRKVRKDIETLEVENEALKMENDEKNQKRLDEIAKELANLKEKQNAL
FT                   NSQFENEKSVFDDISTKKKEIDLLKNEASLAKARGEFQKAAELEYGKIPSLEKEVEILE
FT                   DKWKKMSENGVLLKNQVDEDLVAGILSKWTGISVQKMLTSEKQKFLEVEKHLKESVIGQ
FT                   DKALSALARAIKRNKAGLNADNKPIGSFLFLGPTGVGKTQSAKALAKFLFDDEKAMIRF
FT                   DMSEFMEKHSVSRLLGAPPGYIGHEEGGELTEAVRRKPYSVLLFDEVEKAHKDVFNVLL
FT                   GILDDGRATDSKGVTVDFKNTIIILTSNIASSAIMNLSGKEQEDAVKNELKIFFKPEFL
FT                   NRLDDIITFNPLGKDEAYEIVKLLFKDLQMSLENKGIKASLSENAALLIAKDGFDPDFG
FT                   ARPLRRAIYDLIEDKLSDMILADKLHENDSIIIDAKDDEIIIKKA"
FT   gene            complement(512747..513037)
FT                   /locus_tag="C1336_000070081"
FT                   /note="C1336_000070081 identified by Glimmer3 with a raw
FT                   score of 13.81."
FT   CDS             complement(512747..513037)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070081"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070081 identified by Glimmer3 with a raw
FT                   score of 13.81. Gene function extrapolated from CJE0617
FT                   (CP000025.1) after blastn alignment (98.97 percent identity
FT                   over a 291 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31374.1"
FT                   /translation="MCQEKHTHTHSQKHLKAVCNRLSRTIGHLSAIKRMVENDKDCSEI
FT                   LIQLAAVKAEVNNTAKVVLKEHLAHCMVHAIEENDIQSIEELNKAIDMFMK"
FT   gene            513158..514489
FT                   /locus_tag="C1336_000070082"
FT                   /note="C1336_000070082 identified by Glimmer3 with a raw
FT                   score of 15.71."
FT   CDS             513158..514489
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070082"
FT                   /product="putative secreted protease"
FT                   /note="C1336_000070082 identified by Glimmer3 with a raw
FT                   score of 15.71. Gene function extrapolated from Cj0511
FT                   (AL111168.1) after blastn alignment (98.74 percent identity
FT                   over a 1186 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31375.1"
FT                   /translation="MELILKTKRFFAGLAGFATTFILCLFLTSHLQAKVDQKEEQVQKR
FT                   LEALDKLTKTLAIVEQYYVDDQNISDLVDKSLSGLLSNLDAHSSFLNEKDFNDMKIQTN
FT                   GEFGGLGITVGMKDGALTVVSPIEGTPADKAGIKSGDIILKINDEVTLGINLNDAVDKM
FT                   RGKPKTQITLTIFRKGATKPFDVTLTREIIKIESVYAKMIENENILYLRVTNFDKNVVD
FT                   VASKELKKYPNVKGVILDLRNNPGGLLNQAIGLVNLFVDKGVIVSQKGRIASENQEYKA
FT                   DPKNKISNASLVVLVNGGSASASEIVSGALQDLKRGVIVGENTFGKGSVQQIIPINKTE
FT                   ALRLTIARYYLPSGRTIQAVGVKPDIEVFPGKVNTQEDGFSIKESDLKQHLESELEKID
FT                   KNKKEDKQENKDNKNLISQKQINDDAQLKSAIDTIKILNIKQGQ"
FT   gene            514491..515201
FT                   /locus_tag="C1336_000070083"
FT                   /note="C1336_000070083 identified by Glimmer3 with a raw
FT                   score of 9.83."
FT   CDS             514491..515201
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070083"
FT                   /product="phosphoribosylaminoimidazole-succinocarboxamide
FT                   synthase"
FT                   /note="C1336_000070083 identified by Glimmer3 with a raw
FT                   score of 9.83. Gene function extrapolated from C8J_0476
FT                   (CP000814.1) after blastn alignment (98.45 percent identity
FT                   over a 646 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31376.1"
FT                   /translation="MTKKEMLYEGKGKKLFKTDDENLLISEFKDDLTAFNAEKRGNESG
FT                   KGALNCKISTEIFHLLEKNGIKTHLVETISDTEQVVKKCKIVPIEVIVRNVATGSLTKR
FT                   LGIKDGTVLPFALVEFCLKDDALGDPFINDEHCLILNLVQNEAQISEIKNIARKINSIL
FT                   TPFFDNKNLRLIDFKIELGLTKDNELVLADEISPDSCRFWDKFNNEKLDKDRFRQDLGN
FT                   VKMAYEEVLKRILN"
FT   gene            515210..515455
FT                   /locus_tag="C1336_000070084"
FT                   /note="C1336_000070084 identified by Glimmer3 with a raw
FT                   score of 12.65."
FT   CDS             515210..515455
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070084"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070084 identified by Glimmer3 with a raw
FT                   score of 12.65. Gene function extrapolated from C8J_0477
FT                   (CP000814.1) after blastn alignment (98.95 percent identity
FT                   over a 95 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31377.1"
FT                   /translation="MEVIVNISLKNGVLDPQGKAVEKALHSLNFNSVKEVKIAKQIKIS
FT                   LDEKDEKLAKEQVKKMCEELLVNSVIEDYELIIEKE"
FT   gene            515457..516104
FT                   /locus_tag="C1336_000070085"
FT                   /note="C1336_000070085 identified by Glimmer3 with a raw
FT                   score of 13.76."
FT   CDS             515457..516104
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070085"
FT                   /product="phosphoribosylformylglycinamidine synthase
FT                   subunit I"
FT                   /note="C1336_000070085 identified by Glimmer3 with a raw
FT                   score of 13.76. Gene function extrapolated from C8J_0478
FT                   (CP000814.1) after blastn alignment (98.92 percent identity
FT                   over a 648 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31378.1"
FT                   /translation="MKVAIIRFPGTNCEFDTAYAFEKLGVKTQIVWHEEKEFDTDLVVL
FT                   PGGFSYGDYLRCAAIAKLAPVMQGVFNHAKKGGYILGICNGFQILLESGLLKGAMKHNN
FT                   NLSFISKNQNLRVVSNDNAFLKNFKKDEIINLPIAHGEGNYYADEATLKELQDKDLITL
FT                   KYESNPNGSVFDIAGICDENKKIFGLMPHPERACEKVLGNDLGLKMLKGFLF"
FT   gene            516101..517297
FT                   /locus_tag="C1336_000070086"
FT                   /note="C1336_000070086 identified by Glimmer3 with a raw
FT                   score of 11.76."
FT   CDS             516101..517297
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070086"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000070086 identified by Glimmer3 with a raw
FT                   score of 11.76. Gene function extrapolated from C8J_0479
FT                   (CP000814.1) after blastn alignment (98.66 percent identity
FT                   over a 1045 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31379.1"
FT                   /translation="MKILLTLIFSVVVLFGRGEISVFSGQDENMQKELQKLPQEEQKIY
FT                   QNIPPSDENNDFESNVDDPFIAKGSLVLTNDEYPSRVYVGEVFPITIYARTTENTKFDF
FT                   NISVEKTNLSFLNPDAKWEFINNEYKTTLWFEAKNSNASLSKISIKLLRNNEAFQEADI
FT                   NLNPIKFENTLSNKDFSHLVASSLEIKKVKASYFDDANIIMMVELNATNTNLKSFFIEG
FT                   IQKQGIENLKGDFNASNAFYYAILPLSKTNFEFSYFNKDSKKLENINLKLKISDDEIST
FT                   QSDLNPINKDLNIYKQYTLWFLAVLFGALFVWRKNYIILALAVVCFALSFLVDTNTQNA
FT                   IIKAGSRAKILPTEPSTYFYTANADEKVEVLGKRQNYIKVLFSDGKIGWINKDDLQKN"
FT   gene            517278..517970
FT                   /locus_tag="C1336_000070087"
FT                   /note="C1336_000070087 identified by Glimmer3 with a raw
FT                   score of 13.81."
FT   CDS             517278..517970
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070087"
FT                   /product="1-acyl-sn-glycerol-3-phosphate acyltransferase,
FT                   putative"
FT                   /note="C1336_000070087 identified by Glimmer3 with a raw
FT                   score of 13.81. Gene function extrapolated from CJE0623
FT                   (CP000025.1) after blastn alignment (97.77 percent identity
FT                   over a 359 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31380.1"
FT                   /translation="MIYKKIKALYFWIFFVLSVALVVFCFCFTKSQNTLWKIRKIWAKF
FT                   QRYTISYKQEIIGTFNPQAQMILMNHQSALDIIALEELYPKNLCWIAKKELGEIPIFKV
FT                   AMKKPKLLCIDRKNPRDLVRVLKEAKERISEDRILAIFPEGTRSKNEKMLKFQSGAKIL
FT                   SEKLNLKVQPILIVDSAKILDTKSFSASSGVLKIICMDLVDTNDEKWLENTRKKMQELL
FT                   DQERAKLC"
FT   gene            517964..518332
FT                   /locus_tag="C1336_000070088"
FT                   /note="C1336_000070088 identified by Glimmer3 with a raw
FT                   score of 11.27."
FT   CDS             517964..518332
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070088"
FT                   /product="CrcB"
FT                   /note="C1336_000070088 identified by Glimmer3 with a raw
FT                   score of 11.27. Gene function extrapolated from C8J_0481
FT                   (CP000814.1) after blastn alignment (98.14 percent identity
FT                   over a 215 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31381.1"
FT                   /translation="MLNTLLVVGFGGFIGAILRMLSINLVNKFFPYSISLGTLFVNVLG
FT                   SFIIGLLFSYAQNKGLSPLLKSFISTGFLGAFTTFSTFSYQNLLLLQSGNYLYFALNIL
FT                   LNVFLCLFAAWLGFIIFK"
FT   gene            518405..520231
FT                   /locus_tag="C1336_000070089"
FT                   /note="C1336_000070089 identified by Glimmer3 with a raw
FT                   score of 12.61."
FT   CDS             518405..520231
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070089"
FT                   /product="heat shock protein HtpG"
FT                   /note="C1336_000070089 identified by Glimmer3 with a raw
FT                   score of 12.61. Gene function extrapolated from C8J_0482
FT                   (CP000814.1) after blastn alignment (98.49 percent identity
FT                   over a 729 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31382.1"
FT                   /translation="MQFQTEVNQLLQLMIHSLYSNKEIFLRELISNASDALDKLNFLSV
FT                   SDDKYKSLKFEPKIEIKIDKDRKTLSISDNGIGMDKDDLINNLGTIAKSGTKSFLENLS
FT                   GDAKKDSQLIGQFGVGFYSAFMVASKIEVLSKKALDDKAYLWSSDANGYEINDASKEEQ
FT                   GTSITLYLKDDEFANTYKIESIIEKYSNHIQFPIFMEKEEFTPAKEGEEEGKTELKISQ
FT                   INKANALWRMQKSSLKAEDYERFYEQNFHDSNKPLLYLHTKSEGKLEYNSLFFIPQNAP
FT                   FDLFRVDYQSGLKLYVKRVFISDDDKELLPTYLRFVRGIIDVEDLPLNVSREILQENQI
FT                   LKGVKEASVKKILGELEKLKNNDKEKYLSFFKTFGKVLKEGLYGFGGEKDSLLKLMLYK
FT                   STKGENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEID
FT                   SLVTPMLEFEGLKFVAINQVEDKNELSDEEKNTFAPLVAKFKELLKDQVEDVRLTSRLK
FT                   DSPSCIVYDKNKPDFAMQQLLKQMGQEQNFKPILEINPKHAIFTGLKNNETFSADIATL
FT                   VLNMAKLSEGMGVDNPAEFNASLTKIINKAFS"
FT   gene            520228..520545
FT                   /locus_tag="C1336_000070090"
FT                   /note="C1336_000070090 identified by Glimmer3 with a raw
FT                   score of 15.94."
FT   CDS             520228..520545
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070090"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070090 identified by Glimmer3 with a raw
FT                   score of 15.94. Gene function extrapolated from CJE0626
FT                   (CP000025.1) after blastn alignment (98.11 percent identity
FT                   over a 318 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31383.1"
FT                   /translation="MIENIPASLWTKQDLNAYQIFDVRTPLEWEEGILPNAQCVALYDN
FT                   KGLLNAKFLDEFQSKRDENKKLAFICRSGHRSMVAAEFIAEKLGLESINLDGGMLALKG
FT                   Y"
FT   gene            520545..520979
FT                   /locus_tag="C1336_000070091"
FT                   /note="C1336_000070091 identified by Glimmer3 with a raw
FT                   score of 13.71."
FT   CDS             520545..520979
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070091"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070091 identified by Glimmer3 with a raw
FT                   score of 13.71. Gene function extrapolated from
FT                   CJJ81176_0548 (CP000538.1) after blastn alignment (98.10
FT                   percent identity over a 316 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31384.1"
FT                   /translation="MLGIYLLIAALSFLALYFAVKKLTLNIDEQTLLEPIKMDIYPKFC
FT                   DLIDEKIREFKENVQNANLALKISDQKDEFLEKLGDLSRELTFIQTMNLSNKNDSIWQN
FT                   ELFSFLKELENLLLEYLEKGEEEAENLREFLMNEFEKLKG"
FT   gene            520983..522752
FT                   /locus_tag="C1336_000070092"
FT                   /note="C1336_000070092 identified by Glimmer3 with a raw
FT                   score of 11.65."
FT   CDS             520983..522752
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070092"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070092 identified by Glimmer3 with a raw
FT                   score of 11.65. Gene function extrapolated from Cj0524
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 164 bp alignment). Similar to Cj0524."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31385.1"
FT                   /translation="MQEERNSLKYFKFISWSIFTLVLIFILIRYDELANLLAGVAILLI
FT                   GMTNLGIGFKAFSGGLLEKILAKSTNTKIKSILFGTLSTLIMQSSTLVSIITISFLSAG
FT                   LISLGAGIGIIFGANLGNTASSWLIVGLTNIKISMLAIPLLIIGVLFFFQKDSVLKGLG
FT                   NIFIGIGFFFLGVDYIKSGFENFKHIIDLSRFDFAGFKGVFVFLGLGALLTGVIQSSTA
FT                   TMAIIVAALLAGQISLENSLAATLGTSVGGVVTAVLASLSTNIEGKKLAFANCIFNFGI
FT                   AFLIVLIFPYFIHFLNFLSIALNIEDIALKVALFHTLFNLIGVVFFSFFTPQIVLFLNK
FT                   LVKAPKDKNKDKPLYLDSSLVKFSDTAIEALRKESEHLYNNTYAIVAHAIGFSRKDIQS
FT                   DKSFKEILENKRWFSKNVDLDYLYQTRIKVLFEAIIDFSTKAQVYINDETKNHKIFTFK
FT                   MAAKNLAETTKNLKIIQANIKKYSSSSNEFLALEYNKIRSNLGELLRSIEELRVVEDRE
FT                   KLYLIIKNLQKGKEILKEIDTLTLSNVEHLISVRKITTAEGISILNDTTFAAKIAEELI
FT                   GAVEVIFSKDISN"
FT   gene            complement(522749..524557)
FT                   /locus_tag="C1336_000070093"
FT                   /note="C1336_000070093 identified by Glimmer3 with a raw
FT                   score of 10.13."
FT   CDS             complement(522749..524557)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070093"
FT                   /product="putative penicillin-binding protein"
FT                   /note="C1336_000070093 identified by Glimmer3 with a raw
FT                   score of 10.13. Gene function extrapolated from Cj0525c
FT                   (AL111168.1) after blastn alignment (99.72 percent identity
FT                   over a 359 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31386.1"
FT                   /translation="MQEYKKNRVSKVAFAYCMALLFMIIFISSTFFLTSKRHIPNTEKD
FT                   QYALALRGSIITKDNFTITSSKQIYRAEIDLRSINKDKFDLFLKLFQIYSGISNDQIAD
FT                   IKKRMQNQKKRSYNFVLLQNLDSKQASYLKDLAKKLYIQGFFKAFTNNSGRVETRGLNI
FT                   IEHEEDRIYMSKDSFTPIIGYTKMILDPESGILKNIGVKGLEKYYDECLSPVQNEKIQG
FT                   LKDIGGNIILNLNSLQQKKINGCDLYLNLSLKLQKSIEKAIDQRNEDLKANEIIVGVME
FT                   SKTGRILALASSRRYDPQNRGKDLSVLNASAIEYGYEAGSVIKPFIFTTALRLGKIKMD
FT                   EVINTYGGSYKLGRFTIKDDHKMDKMTMEEVIRYSSNIGMIQIAKRLNNIEIVSGLKIF
FT                   KFGEKSGIDLPYEQKGEIPNPKRLRDIEKSVLSYGYGLKTTFIQLLAAYNVFNNDGFYI
FT                   TPRLAEKFYQNGRFTNLDNDVKKEKILSSEATKTMQNVLINVIEKGTGKKAITQGIIAG
FT                   GKTGTARIAERQGYTSNRYNASFFGFANDLNHAYTIGVLVRHPTKPYSYYAAQSALPMF
FT                   KDVVDILINEEFLTPIQDNNQTSTNN"
FT   gene            complement(524564..524860)
FT                   /locus_tag="C1336_000070094"
FT                   /note="C1336_000070094 identified by Glimmer3 with a raw
FT                   score of 16.00."
FT   CDS             complement(524564..524860)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070094"
FT                   /product="flagellar hook-basal body complex protein FliE"
FT                   /note="C1336_000070094 identified by Glimmer3 with a raw
FT                   score of 16.00. Gene function extrapolated from
FT                   CJJ81176_0551 (CP000538.1) after blastn alignment (99.33
FT                   percent identity over a 297 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31387.1"
FT                   /translation="MNNINDLRLNNNISNTNKSQNSTGIGDEFAKMLKNEIDDLNKAQE
FT                   SGEAAMTDIATGQVKDLHQAAIAITKAESSMKFMLEVRNKAISAYKEITRTQI"
FT   gene            complement(524867..525361)
FT                   /locus_tag="C1336_000070095"
FT                   /note="C1336_000070095 identified by Glimmer3 with a raw
FT                   score of 15.90."
FT   CDS             complement(524867..525361)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070095"
FT                   /product="flagellar basal-body rod protein FlgC"
FT                   /note="C1336_000070095 identified by Glimmer3 with a raw
FT                   score of 15.90. Gene function extrapolated from CJE0631
FT                   (CP000025.1) after blastn alignment (99.19 percent identity
FT                   over a 495 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31388.1"
FT                   /translation="MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRRR
FT                   EVIFKATDFDKLLNEQINKDNNFLKYENPLNDPSSPEEAKPAIQSVVVDKVVRDDKDFR
FT                   MKYDPSHPDANAEGYVAYPNVNPVIEMADLIEATRAYQANVSAFTSAKTIAQSAIDLLR
FT                   G"
FT   gene            complement(525371..525802)
FT                   /locus_tag="C1336_000070096"
FT                   /note="C1336_000070096 identified by Glimmer3 with a raw
FT                   score of 12.65."
FT   CDS             complement(525371..525802)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070096"
FT                   /product="flagellar basal-body rod protein FlgB"
FT                   /note="C1336_000070096 identified by Glimmer3 with a raw
FT                   score of 12.65. Gene function extrapolated from C8J_0489
FT                   (CP000814.1) after blastn alignment (97.22 percent identity
FT                   over a 432 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31389.1"
FT                   /translation="MINPFKSKELVTGALAGRNLRNQLINANLANVDTPFYKARDIEFE
FT                   TALVNRANEIFKKNDNKELQLAITEEGHQKPWKFPDPSKSTIYLRDGHLARNDANTVDL
FT                   DVETTEMSKNTVMITALDGVLRRQSNIFSSILDASSKLS"
FT   gene            complement(525882..526661)
FT                   /locus_tag="C1336_000070097"
FT                   /note="C1336_000070097 identified by Glimmer3 with a raw
FT                   score of 8.47."
FT   CDS             complement(525882..526661)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070097"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070097 identified by Glimmer3 with a raw
FT                   score of 8.47. Gene function extrapolated from C8J_0490
FT                   (CP000814.1) after blastn alignment (99.10 percent identity
FT                   over a 780 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31390.1"
FT                   /translation="MSSIDKYILFFLGHPQSGWINIGTKDLNRAEFLHKLTIAKAALQT
FT                   ITLIPGETSVIFLEQAAKQLGLDKDMLLKEFQAQAPYDEGVFLPETYKIPKGITENLLI
FT                   QMLLNHAEISNKKTSEKIFGDYNPKKWHQYIIIASVIQKEAANENEMPIVASVIYNRLK
FT                   KGMKLQMDGTLNYGIYSHVKVTPQRIRQDNSSYNTYKFTGLPKEAVCNVSLAAIRAAIF
FT                   PLKTDYLYFVRDKNTGVHIFNTNIDDHNKAINLQKGK"
FT   gene            526798..529368
FT                   /locus_tag="C1336_000070098"
FT                   /note="C1336_000070098 identified by Glimmer3 with a raw
FT                   score of 8.61."
FT   CDS             526798..529368
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070098"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070098 identified by Glimmer3 with a raw
FT                   score of 8.61. Gene function extrapolated from
FT                   CJJ81176_0555 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 162 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31391.1"
FT                   /translation="MKKKILYIVVFFVVLILALFIVLKNGIVISSIQFDFLKLEQLYIK
FT                   LDKKLIVRAKNITINETQNSEISSQTHSSDNASTEILKITKNLKYLYTFVEEIDIQNLN
FT                   IKDNHVRILFKDNEFFIDNDLLFLKLTLQRQNKELIAGIKKLLLKDYDLNIDGNLSINT
FT                   KSEFYYFQGRASGELLDFNASISYKDKNLAYKIEDLNIRNITEIFKRVNKRIELPQSLN
FT                   LWMAYRAKGEFYHLDYLQGFIDFTKNNYYLDNISASGYVNNVKVRLDDKMNAIEIPKLD
FT                   LNLNKQKLDFVFNKAFYNGADLSSSKVYLYDLFDEKKAGIYLRIKSNNLKFDEKLAKAL
FT                   EDYHFSLPFYQKSGKIKSDLELKIDFHDKGEISYSGILALENASISLADFNITKAFVKL
FT                   NQNNLNIENASVENGFLKADFNAKFDLQKQQGNFNTQISRLYFDNGELLDLKNQNVEVK
FT                   LDYSQNVNISIPQWNLILNFKDGLEANLSNPKILFSFSPLLKKFGFIDAKNVYYKTLNF
FT                   EDFNASVNNAYFKNNLLINGQTPYENDSFDIVKNKGIMEIHTQSDTASAKISSDNKEIH
FT                   LKNLSYIYRKGSNSSNSTFDISTNTQNISFGGANVALILPDSNKTLAFDRVEADLKGDA
FT                   LDLKGSRGNAKFDLYYSSNDLNLNVSNIDDNYLNEFLQKQAVQDGVFNLSIKGSGLEYF
FT                   DGQIDFKNTYVKDLKGVNQLISFIDTVPSLLMFKSPTFNQKGLSLHDGKIIFNRKKDLL
FT                   SVSAINLNGDSVDIYGLGSANLRLNTVDFSLELKTLKSASEAISKVPILNYVILGKNQE
FT                   ISTNLKIDGSIDDPKFHTEILTDTLKTPFNLIKNIIQLPANLLN"
FT   gene            529386..531689
FT                   /locus_tag="C1336_000070099"
FT                   /note="C1336_000070099 identified by Glimmer3 with a raw
FT                   score of 14.86."
FT   CDS             529386..531689
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070099"
FT                   /product="isocitrate dehydrogenase"
FT                   /note="C1336_000070099 identified by Glimmer3 with a raw
FT                   score of 14.86. Gene function extrapolated from Cj0531
FT                   (AL111168.1) after blastn alignment (99.00 percent identity
FT                   over a 2197 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31392.1"
FT                   /translation="MKTKTNFKLTLAFFFICNILKNENKNKYFKGLKMQITYTLTDESP
FT                   ALATYSFLPIVKAFLSRAHIGVKTSDISLSGRILATFSEYLKEEQRCEDALELLGELVK
FT                   RSDANLIKTPNISASIPQLKAAIKELQDKGYMLPNYPDEPKNDEELQIKTKYQKVLGSA
FT                   VNPVLRQGNSDRRSTKAVKDYAKNNPYRVVEFNPNSKTRVSYMKEGDFFSNEKAVLIDQ
FT                   DCVANIEFTSVDGKNEILKEGLKLEKNEILDATFMDVQKLQEFYAKEIKASKDDDVLFS
FT                   LHLKATMMKVSDPILFGYAVKVFFKELFIEFQDEFEKLGINPNNGLSELLSKIENSSKK
FT                   DEILKKYNEILAKSADISMVNSDKGITNLHVPSDVIVDASMPAMLKNGARLWDKEGKEK
FT                   DTNAVIPDQTYATIYEAVIEDLHKNGTLNPSKLGSVSNVGLMAKKAQEYGSHDKTFVAK
FT                   EEGAFKIVSNGKVLLEHKVRKGDIYRVNQAKFDAVLNWIDLGIERSELSGAEAIFWLDS
FT                   KRASNKIMITLVQNRLKEKGKNIAILTPKEACLRSLELIREGKDVISITGNVLRDYLTD
FT                   LFPILELGTSAKMLSVVPMLKGGAMFETGAGGSAPKQVEQLVEENHLRWDSLGEFLALQ
FT                   ASLEFYANKCSNHKAKVLAECLDEAIGEWLENNKAPSRKVKEDDNRTSHFYLAMYFANH
FT                   LARQASDMELQSFFKDIALELSSNEEKIRAEFNDAQGVKVDLGGYYKFDDEKANKIMRP
FT                   SATFNAILEKIGQR"
FT   gene            531686..532588
FT                   /locus_tag="C1336_000070100"
FT                   /note="C1336_000070100 identified by Glimmer3 with a raw
FT                   score of 15.86."
FT   CDS             531686..532588
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070100"
FT                   /product="malate dehydrogenase"
FT                   /note="C1336_000070100 identified by Glimmer3 with a raw
FT                   score of 15.86. Gene function extrapolated from
FT                   CJJ81176_0557 (CP000538.1) after blastn alignment (97.45
FT                   percent identity over a 903 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31393.1"
FT                   /translation="MKITVIGAGNVGSSVAYALILREIANEIVLVDINEDLLYAKELEL
FT                   TQSIAALNLNIDLLCTKDYTHTKNSDIVLFSAGFARKDGQSREELLQLNTSIMLDCAKK
FT                   IKDFTEDPLFIILTNPVDFLLNTLYESGIFSSKKIIAMAGVLDNARFKYELAKKLKVKM
FT                   SSVDTRLIGFHNDDMVLVKSYASVKNKNISEFLNEEEFDDLENEVKTGGAKVIKHLKTS
FT                   AYLAPASACIRMLESIRSGEFLPMSVILHGEFGVQNKALGVMARLGLEGVIEIMRLDLS
FT                   LQEKDKLEKSLIKYQYKGE"
FT   gene            532589..533752
FT                   /locus_tag="C1336_000070101"
FT                   /note="C1336_000070101 identified by Glimmer3 with a raw
FT                   score of 13.76."
FT   CDS             532589..533752
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070101"
FT                   /product="succinyl-CoA synthetase beta chain"
FT                   /note="C1336_000070101 identified by Glimmer3 with a raw
FT                   score of 13.76. Gene function extrapolated from C8J_0494
FT                   (CP000814.1) after blastn alignment (98.63 percent identity
FT                   over a 1164 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31394.1"
FT                   /translation="MNIHEYQAKAIFADNGIPTLKGKVAFSVDEAVANAKELGGSVWAV
FT                   KAQIHAGGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANI
FT                   VKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPEKIAKVGIDPQIGFKMFHGLEV
FT                   ARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSA
FT                   LYRHPEIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGA
FT                   KPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVE
FT                   VNIPIVVRLDGTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLVG"
FT   gene            533762..534631
FT                   /locus_tag="C1336_000070102"
FT                   /note="C1336_000070102 identified by Glimmer3 with a raw
FT                   score of 16.12."
FT   CDS             533762..534631
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070102"
FT                   /product="succinyl-CoA synthase, alpha subunit"
FT                   /note="C1336_000070102 identified by Glimmer3 with a raw
FT                   score of 16.12. Gene function extrapolated from C8J_0495
FT                   (CP000814.1) after blastn alignment (98.04 percent identity
FT                   over a 868 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31395.1"
FT                   /translation="MSILVNKNTKVIVQGFTGKEATFHAEQCMAYGTNIVGGVTPHKGG
FT                   QTHLGKPVFDTVADAVKATKADVSLIFVPAFAVGDSVIEAADAGIKLAVVITEHTPVKD
FT                   MMFAKQYANKKGMKIIGPNCPGIITSEECKLGIMPGFIFKKGCVGLISKSGTLTYEAAN
FT                   QVVQGGYGISTAVGIGGDPIIGLAYKELLSEFQKDDETKAIVMIGEIGGSLEVEAAKFI
FT                   KENISKPVVAFIAGATAPKGKRMGHAGAIVGSADESAVAKKEALKSYGIHVVDSPALIG
FT                   EEIQKILG"
FT   gene            534650..534955
FT                   /locus_tag="C1336_000070103"
FT                   /note="C1336_000070103 identified by Glimmer3 with a raw
FT                   score of 11.94."
FT   CDS             534650..534955
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070103"
FT                   /product="2-oxoglutarate:acceptor oxidoreductase, delta
FT                   subunit"
FT                   /note="C1336_000070103 identified by Glimmer3 with a raw
FT                   score of 11.94. Gene function extrapolated from CJE0639
FT                   (CP000025.1) after blastn alignment (99.27 percent identity
FT                   over a 275 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31396.1"
FT                   /translation="MTAPKDTPVWVDEHRCKACNICVSYCPAGVLAMRDDVHAVLGQMI
FT                   EVVHPESCIGCTECETHCPDFAIMVAKRDEFKFAKLTAESKDRAVAVKNNKYKKLA"
FT   gene            534964..536088
FT                   /locus_tag="C1336_000070104"
FT                   /note="C1336_000070104 identified by Glimmer3 with a raw
FT                   score of 14.43."
FT   CDS             534964..536088
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070104"
FT                   /product="2-oxoglutarate:acceptor oxidoreductase, alpha
FT                   subunit"
FT                   /note="C1336_000070104 identified by Glimmer3 with a raw
FT                   score of 14.43. Gene function extrapolated from CJE0640
FT                   (CP000025.1) after blastn alignment (97.69 percent identity
FT                   over a 1125 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31397.1"
FT                   /translation="MREVIATGNVLIAKAAIDCGCKFFGGYPITPSSEIAHELSHMLPA
FT                   NDGTFIQMEDEISGISVAIGAAMSGVKSMTASSGPGISLKAEQIGLAFIAEIPLVIVNV
FT                   MRGGPSTGLPTRVAQGDLFQAKAPTHGDFASIAIAPASLEEAYTETIRAFNLAEKYMTP
FT                   VFLLMDETVGHMNGKAVLPDLKDIKVYNRKKFEGDKKDYKPYAAGENEPATLNPFFTGY
FT                   RYHVTGLHHGDIGFPTEDGVIVKKNMERLIGKIKNNQEDICAYEEYMLDDAEFLIIAYG
FT                   SVSRSAKEAIQRLREQGIKVGLFRPITLYPVAEKKIAEVVSKFKKVMVSELNMGQYLEE
FT                   IERVTSRRDFISLHRANGRPITPSEIIAKVKENI"
FT   gene            536089..536934
FT                   /locus_tag="C1336_000070105"
FT                   /note="C1336_000070105 identified by Glimmer3 with a raw
FT                   score of 14.07."
FT   CDS             536089..536934
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070105"
FT                   /product="2-oxoglutarate:acceptor oxidoreductase, beta
FT                   subunit"
FT                   /note="C1336_000070105 identified by Glimmer3 with a raw
FT                   score of 14.07. Gene function extrapolated from
FT                   JJD26997_1393 (CP000768.1) after blastn alignment (97.04
FT                   percent identity over a 846 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31398.1"
FT                   /translation="MAFNYDEYLRVDKMPTQWCWGCGDGVVLKCIIRAIEKLGWNMDDV
FT                   CLVSGIGCSGRMSSYVNCNTVHTTHGRAIAYATGIKLANPSKHVIVVSGDGDTLAIGGN
FT                   HTIHGCRRNIDLTHIVINNFIYGLTNSQTSPTTPKGFYTVTAQFGNIDPNFDACELTKA
FT                   AGASFVARGNVIEANKLENLIYKALAHKGYSFVDVFSNCHINLGRKNKMGEAVAMLDWI
FT                   KNRVVDKAKFESMDFEERKDKFPTGILHEDNSQPEYCHAYEEVRRAAKEKRMVDLGALK
FT                   "
FT   gene            536931..537488
FT                   /locus_tag="C1336_000070106"
FT                   /note="C1336_000070106 identified by Glimmer3 with a raw
FT                   score of 16.67."
FT   CDS             536931..537488
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070106"
FT                   /product="2-oxoglutarate:acceptor oxidoreductase, gamma
FT                   subunit"
FT                   /note="C1336_000070106 identified by Glimmer3 with a raw
FT                   score of 16.67. Gene function extrapolated from
FT                   CJJ81176_0563 (CP000538.1) after blastn alignment (98.21
FT                   percent identity over a 558 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31399.1"
FT                   /translation="MKYQLRFGGEGGQGVITAGEILAEAAIKEGRQAFKASTYTSQVRG
FT                   GPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHPES
FT                   EDYKKWKIFEIPIITIAKDEVGNVATQSVVALAIAAYMSKCIDLDVLKDTMLHMVPAKT
FT                   RDANAKAFDLGVKYATQAKPHS"
FT   gene            537627..537890
FT                   /locus_tag="C1336_000070107"
FT                   /note="C1336_000070107 identified by Glimmer3 with a raw
FT                   score of 19.92."
FT   CDS             537627..537890
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070107"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070107 identified by Glimmer3 with a raw
FT                   score of 19.92. Gene function extrapolated from CJE0643
FT                   (CP000025.1) after blastn alignment (98.28 percent identity
FT                   over a 174 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31400.1"
FT                   /translation="MDFFDEMFNKTPKEKFIEIIQNGNLGALEKVFEEFFADHIAMVEL
FT                   LEKQGLTEMDVKNFILENGDFIEERQNDIYIELGAKILGHEG"
FT   gene            537893..538429
FT                   /locus_tag="C1336_000070108"
FT                   /note="C1336_000070108 identified by Glimmer3 with a raw
FT                   score of 9.92."
FT   CDS             537893..538429
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070108"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070108 identified by Glimmer3 with a raw
FT                   score of 9.92. Gene function extrapolated from C8J_0501
FT                   (CP000814.1) after blastn alignment (98.57 percent identity
FT                   over a 489 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31401.1"
FT                   /translation="MFKISPCLICIFFIFSNVLASEPTFDYTYKFILKKDERASVQIKE
FT                   IGYEDKVQNFDFYWTLFDNANIIVHSKFRKYPRQFVMSLRRNLDWVTQTLIPDYTNPHI
FT                   DRARLILEFSGYNKGLATFTVYIEDKESRLMVEFLDPRKKALQNPPQNNQVVPMINFNE
FT                   PQVKPLTSKENNNSN"
FT   gene            538443..539336
FT                   /locus_tag="C1336_000070109"
FT                   /note="C1336_000070109 identified by Glimmer3 with a raw
FT                   score of 14.37."
FT   CDS             538443..539336
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070109"
FT                   /product="polyprenyl synthetase"
FT                   /note="C1336_000070109 identified by Glimmer3 with a raw
FT                   score of 14.37. Gene function extrapolated from C8J_0502
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 110 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31402.1"
FT                   /translation="MQKIDELIKQFLQELGYEPILNMLSNVKSGKKLRSKLLLAIADES
FT                   EIAFKICAAIELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALMLGDILYSKAFYE
FT                   LSKMDARFASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCG
FT                   AILAGLYEKDFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLY
FT                   ENLQEQDRIYLQTLFKKDLNENEKEWLKTKFEEQKALEKAILEAKTYAKKASKAIEKYD
FT                   NNKLNDIIKAMIDREF"
FT   gene            539336..540634
FT                   /locus_tag="C1336_000070110"
FT                   /note="C1336_000070110 identified by Glimmer3 with a raw
FT                   score of 10.35."
FT   CDS             539336..540634
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070110"
FT                   /product="glutamyl-tRNA reductase"
FT                   /note="C1336_000070110 identified by Glimmer3 with a raw
FT                   score of 10.35. Gene function extrapolated from C8J_0503
FT                   (CP000814.1) after blastn alignment (97.61 percent identity
FT                   over a 1299 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31403.1"
FT                   /translation="MYYCISFTHKNTDIALREKLSFSNEAKKSEFLKIISTHENIEECL
FT                   VISTCNRVEIVAFVKMACAEFIVKSLALLCDVDKDILLEKADIFEDSGAIHHLFSVASS
FT                   LDSLVVGETQIAGQLKDAFAFAVKNNFCGVHLSRAVHSAFKCAAKVRNETQISKNPISV
FT                   ASVAVAKAKELADLTQKKAVVIGAGEMGELAAKHLIAAGAKVIILNRDLQKAKDLCERL
FT                   GVLSEYDSLENLKKYLNQYEFFFSATNAPNAIITNSLIEELPYKRYFFDIAVPRDIDIN
FT                   ENENISVFAVDDLEIVVQKNLALREQEARMAYGIIGRETSEFFRYLNDLALMPIIKAIR
FT                   LQAKEYADKQLEIALKKGYLKKSDKEEARKLIHQVFKAFLHTPTVNLKHLQGKMQSDTV
FT                   INAMRYVFDLQNNLEGLNQYKCEFDMENNDEIY"
FT   gene            540621..542327
FT                   /locus_tag="C1336_000070111"
FT                   /note="C1336_000070111 identified by Glimmer3 with a raw
FT                   score of 13.28."
FT   CDS             540621..542327
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070111"
FT                   /product="prolyl-tRNA synthetase"
FT                   /note="C1336_000070111 identified by Glimmer3 with a raw
FT                   score of 13.28. Gene function extrapolated from C8J_0504
FT                   (CP000814.1) after blastn alignment (97.83 percent identity
FT                   over a 1707 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31404.1"
FT                   /translation="MRFTKFYAPSLKEAPKDASLPSHIFLTRAGFVEQIGSGLYNFLPL
FT                   GKRVLDKIKNIVKEEMDKAGAQEVNLSFITPASLWQESGRYNVFGKELLRFKDRKENEF
FT                   VLGPTHEEAMLSLVKNKITSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFLMKDGYSF
FT                   HANEEDLGREFELMYKTYSQILQRMGLDFRAVEADSGAIGGSGSKEFMVLAKNGEDDIL
FT                   ICENCDYAANVEAAKRAKKICQDERPEANYASKFHTPNIKTIDSLAQFFKINAFYTIKA
FT                   VVKKAIYENESKLVVFFIRGSDDLQEIKAQNACSALELVDASEKELEKAGLVAGFIGFV
FT                   GLKDIDFYIDFELENEKQMIMGANEKDYHLIGIDVVNLNKDRFKDLIEVKEGDCCAKCG
FT                   AKLKQSKGIEVGHIFKLGQKYSKAMNANFLDENGKSQPFYMGCYGIGVSRLLAVAIEAS
FT                   HDEKGCIWNKTLAPFVLEIIVSNLKDEKALEFANKLYEDLTNLGLEVLLDDRNERFGVK
FT                   MNDFELMGFPYALVIGKGLENNEIEFIQREGLVKELIKTDELMEILKKKVL"
FT   gene            542324..542713
FT                   /locus_tag="C1336_000070112"
FT                   /note="C1336_000070112 identified by Glimmer3 with a raw
FT                   score of 11.64."
FT   CDS             542324..542713
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070112"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070112 identified by Glimmer3 with a raw
FT                   score of 11.64. Gene function extrapolated from C8J_0505
FT                   (CP000814.1) after blastn alignment (98.95 percent identity
FT                   over a 95 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31405.1"
FT                   /translation="MNYKLSLSPLFVLEIIASIFFIVFFGFGNFLFFILLSMIFGAVLL
FT                   GIFWKNMLEFQMGGLKDMLTQFSFVIAGFLLVVPGIITSVFGIFVFFFGIALKIMTKSK
FT                   YQYTKQEYQNSNEEIIDVEIIEDRK"
FT   gene            542710..543633
FT                   /locus_tag="C1336_000070113"
FT                   /note="C1336_000070113 identified by Glimmer3 with a raw
FT                   score of 17.27."
FT   CDS             542710..543633
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070113"
FT                   /product="porphobilinogen deaminase"
FT                   /note="C1336_000070113 identified by Glimmer3 with a raw
FT                   score of 17.27. Gene function extrapolated from CJE0649
FT                   (CP000025.1) after blastn alignment (97.22 percent identity
FT                   over a 611 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31406.1"
FT                   /translation="MKLIIATRKSQLALWQSEHVAQILKNTHQIEVLLEGFKTKGDVLL
FT                   DSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAM
FT                   LSQNYKDFLSLPKGAKIGTTSLRRKMQILLLRPDLEIISLRGNVNSRIEKLKNNEFDAI
FT                   ILAMAGIKRLNLDKQVNFVYGFSKDELIPAASQGALGIESINDEKILELLKCLNDENAL
FT                   IETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPDGREILKDKRMIKKDDFK
FT                   GFGESLAKEFIAKGAKELLKKAESML"
FT   gene            543630..545432
FT                   /locus_tag="C1336_000070114"
FT                   /note="C1336_000070114 identified by Glimmer3 with a raw
FT                   score of 16.11."
FT   CDS             543630..545432
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070114"
FT                   /product="3-octaprenyl-4-hydroxybenzoate carboxy-lyase,
FT                   putative"
FT                   /note="C1336_000070114 identified by Glimmer3 with a raw
FT                   score of 16.11. Gene function extrapolated from
FT                   CJJ81176_0571 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 104 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31407.1"
FT                   /translation="MKEFIQILKENDLLRVIEEPVDVDLEIAHLAYIEAKKGEKGKALL
FT                   FKNPIDKKLNKQYKFPVLMNTFCNEKALNLAFGRDYEEVAEEISKLTKLHIPTSFKAKM
FT                   DFFMNLLSFKNVPPKRLKKNKALYDYEILNSLEELPVLRTWEDDAGKFITMGQVYTQNL
FT                   DKTQNNLGMYRLQMSDKNELLMHWQIHKDGANFYHEYKNAGFKKMPVSIAIGGDPLYIW
FT                   CSQAPLPKGIFELLLYGFIKKTPAKLTPCENGIFVPCDSDVVIEGYVDLEEFKIEGPFG
FT                   DHTGFYTPAELFPVMKVEKIYAKKDAIYQATVVGKPPLEDKIMGLGTERIFLPLLQTSV
FT                   PDLIDYNMPENGVFHNLILAKIDAKYPAHAQQIMHAFWGVGQMSFVKHAIFVDKNAPSL
FT                   KDYDALIPYILNRFDTKKMLISEGICDQLDHASPNSCFGGKAGLDACKETQVEELEILE
FT                   DEKLLELFKTKVELLNLKQFYKESKSPIVCILLNKKEKIEQSFNKFLEFKKHFRILVFL
FT                   DTENKLENPYMLVWRVVNNIDAKRDIFIKEERLGVDASAKGEAEGYLRTWPKQTDCTKS
FT                   VIEDLILRNILENNPDLFNKFEIF"
FT   gene            545614..545952
FT                   /locus_tag="C1336_000070115"
FT                   /note="C1336_000070115 identified by Glimmer3 with a raw
FT                   score of 12.65."
FT   CDS             545614..545952
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070115"
FT                   /product="flagellar protein FlaG"
FT                   /note="C1336_000070115 identified by Glimmer3 with a raw
FT                   score of 12.65. Gene function extrapolated from
FT                   JJD26997_1383 (CP000768.1) after blastn alignment (96.46
FT                   percent identity over a 339 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31408.1"
FT                   /translation="MDTALANISQRTSETQASLNIQTDRSQSQGGDDGQQQGVNEKLAD
FT                   ITKKLNEQMDSLDTNVRFGYSDKINSMYISVTEKSTGREIRQIPSEEAMRLAEYFRDVI
FT                   GMIFDKES"
FT   gene            545955..547898
FT                   /locus_tag="C1336_000070116"
FT                   /note="C1336_000070116 identified by Glimmer3 with a raw
FT                   score of 13.17."
FT   CDS             545955..547898
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070116"
FT                   /product="flagellar hook-associated protein FliD"
FT                   /note="C1336_000070116 identified by Glimmer3 with a raw
FT                   score of 13.17. Gene function extrapolated from
FT                   JJD26997_1382 (CP000768.1) after blastn alignment (94.95
FT                   percent identity over a 198 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31409.1"
FT                   /translation="MAFGSLSSLGFGSGVLTQETLDKLKEAEQKARIDPYTKKIEENTT
FT                   KQKDLTELKTKLSAFQAAVSSLGDSTAFAKRKVIASITDNPPASLSVTSGVALQSMNIN
FT                   VTQLAQKDVYQSKGLVNDTGIINASLKEPTNLTFFSNGKEYSVTIDKNTTYSDLVDKIN
FT                   TATGGEIVAKMVNTGEKDAPYRLTLTSKETGEDSAISFYPGAKDSDGKYKVDENAKSVF
FT                   ESLGWKLDEDALKAEDFDPAKSKKGVGIIDSEDNPLHIQKAQDAKFTMDGIKMTRSSNT
FT                   ITDLGVGITLTLNKTGEINFDVQQDSESVTKAMQDMVDAYNDLVLNLNAATDYNSETGT
FT                   KGSLQGVTEVNSIRSSIISALFKTQSVDGTVEDTNGNKVSAKVMLSLQDYGLSMTESGT
FT                   LNFDSSTFESKMKENPDLTESFFSGITQYKDINYTGDLIKEDSLSKYVGEGDDKGISFS
FT                   SGKFQIVTNFETYDLSKNADGTDFKLTGKTEQEMLQNLADHINSKGIEGLTVKVETYEK
FT                   DGEKGYKLNFKTDGSSDFAIKGDSEFLKQFGLSQTSIAAEAVEGVGVFAQLKTTLQGIT
FT                   GKDGSLTKYDESLTNDTKSLTQTKESTQTLIDTRYDTMANQWLQYESILNKLNQQLTTV
FT                   TNMINAANNSNN"
FT   gene            547910..548296
FT                   /locus_tag="C1336_000070117"
FT                   /note="C1336_000070117 identified by Glimmer3 with a raw
FT                   score of 14.65."
FT   CDS             547910..548296
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070117"
FT                   /product="flagellar protein FliS"
FT                   /note="C1336_000070117 identified by Glimmer3 with a raw
FT                   score of 14.65. Gene function extrapolated from
FT                   JJD26997_1381 (CP000768.1) after blastn alignment (94.83
FT                   percent identity over a 387 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31410.1"
FT                   /translation="MQNSLAYNAYSQNQAGIESPQKLIEMLYEGILRFCARAKVAIRNE
FT                   DIEQRVYFVKRTTAIFIELINTLDYEKGGDVAHYLSGLYTREIQLLSLANLENNEERIN
FT                   EVINVTKGLLEAWREVHSNETVDQ"
FT   gene            548277..548552
FT                   /locus_tag="C1336_000070118"
FT                   /note="C1336_000070118 identified by Glimmer3 with a raw
FT                   score of 10.38."
FT   CDS             548277..548552
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070118"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070118 identified by Glimmer3 with a raw
FT                   score of 10.38. Gene function extrapolated from
FT                   JJD26997_1380 (CP000768.1) after blastn alignment (91.06
FT                   percent identity over a 123 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31411.1"
FT                   /translation="MKQWINDFKLALIQEDINKLENLLDKLDMKAFIKNLAKRSPSEDF
FT                   IKENINDIFYQIQALLQEAVALIEQKKKAKAVEIQKFQKALTYVRS"
FT   gene            548983..549552
FT                   /locus_tag="C1336_000070119"
FT                   /note="C1336_000070119 identified by Glimmer3 with a raw
FT                   score of 13.36."
FT   CDS             548983..549552
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070119"
FT                   /product="elongation factor P"
FT                   /note="C1336_000070119 identified by Glimmer3 with a raw
FT                   score of 13.36. Gene function extrapolated from C8J_0512
FT                   (CP000814.1) after blastn alignment (97.37 percent identity
FT                   over a 570 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31412.1"
FT                   /translation="MASYSMGDLKKGLKIEIDGIPFKIVEYQHVKPGKGPAFVRIKIKS
FT                   FIDGKVLEKTFHAGDKCEAPNLEDKTMQYLYDDGENCQFMDTQTYEQVAISDDDVGEAK
FT                   KWMLDGMMVDVLFHNGKAIGVEVPQVVELKIIETAPNFKGDTQGSNKKPATLETGAVVQ
FT                   IPFHVLEGEVIRVDTVRGEYIERANK"
FT   gene            549919..551205
FT                   /locus_tag="C1336_000070120"
FT                   /note="C1336_000070120 identified by Glimmer3 with a raw
FT                   score of 9.65."
FT   CDS             549919..551205
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070120"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000070120 identified by Glimmer3 with a raw
FT                   score of 9.65. Gene function extrapolated from C8J_0516
FT                   (CP000814.1) after blastn alignment (97.05 percent identity
FT                   over a 1085 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31413.1"
FT                   /translation="MVFLIISSIIVAIILGYITRHNVGIFAMIFAYIIGAFFMDLAPKK
FT                   IIAFWPISIFFVIFAVSLFYNFATVNGTLEKLAGHLMYRFANHPYLLPFVIFVVSAIIA
FT                   ALGAGFYTVLAFMAPLTFLLCDKIGLSKIAGAMAINYGALGGANFMTSQSGIIFRGLMQ
FT                   NSGIEANEAFINSSIIFAFTIILPIVVLSFFVFNAFKNKMQTSVISKPDPFDYKQKTTL
FT                   ILMFMMIIVVLIFPVLNIIFPHNETISYFNKKIDIAMIAMIFVAIALFLKLANEKQVVA
FT                   LIPWGTLIMICGVGMLISIAVEAGAIKLFSDLVENEVNVIFIPLIMCAIAAFMSLFSST
FT                   LGVVTPALFPIVPSIAASSGLSEALLFSCIVVGAQASAISPFSSGGSLILGSCPDKYKE
FT                   KLFKDLLIKAVPIGFMAAILATIIMSFIL"
FT   gene            551216..552013
FT                   /locus_tag="C1336_000070121"
FT                   /note="C1336_000070121 identified by Glimmer3 with a raw
FT                   score of 14.04."
FT   CDS             551216..552013
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070121"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070121 identified by Glimmer3 with a raw
FT                   score of 14.04. Gene function extrapolated from C8J_0517
FT                   (CP000814.1) after blastn alignment (97.37 percent identity
FT                   over a 798 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31414.1"
FT                   /translation="MKIDTHAHIFLKKLNTVANARYKPDYDASFKDYKANLDHYDFDKG
FT                   VLVQPSFLGVDNEFLLQSIEKDENIKAIVVVDEGIKFDELQKLKERKACGVRLNLIGKE
FT                   LPNFKSTVWTQFFENLSKLKMQIEIQRDLDNNLVDIVKNLIPYGCNIVIDHLARANANL
FT                   TNLEDLICLKNSRIFFKISGFYRAKIDYVNNEQAIKFAKKIYEILKEHFPLSNFVFGSD
FT                   WPHTNFEANVNFSSALAAFNEVVVSKKEQEQILGDNACVLFDF"
FT   gene            complement(552010..553095)
FT                   /locus_tag="C1336_000070122"
FT                   /note="C1336_000070122 identified by Glimmer3 with a raw
FT                   score of 11.00."
FT   CDS             complement(552010..553095)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070122"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070122 identified by Glimmer3 with a raw
FT                   score of 11.00. Gene function extrapolated from C8J_0518
FT                   (CP000814.1) after blastn alignment (98.86 percent identity
FT                   over a 789 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31415.1"
FT                   /translation="MNKIEMLKQHFKEIAKLNSSEQVWQMPFFAALGVGIVLGFSVFFG
FT                   KLNYGLIAMIGALSFLYVPNTPLYHRMAVVMCCSFGIVSSFFLGILTHFLPAIFAFIPI
FT                   GLVAMGSSILIRYYNIGAPGYFFFVFSCILGAYSPFEAKDFIFLVGLVFLGAMVANLMA
FT                   LLYSIVVIYGFKNALPSEIPPREYIGFDAVFVDSLIMGSFVAFSIFIGIFLELERSYWI
FT                   AISCTAIMQGVTLNSIWIKQIQRIIGTALGVCFAWWLLSKQFHNIELVLLMMSLFFIGQ
FT                   FLVNRNYALAMIFFTPYATYLSEAANFMSENANTLILARLVDVVIGSILGLLGGFVIYK
FT                   PYLRVHFERIAKYIFRIKRKA"
FT   gene            complement(553092..554324)
FT                   /locus_tag="C1336_000070123"
FT                   /note="C1336_000070123 identified by Glimmer3 with a raw
FT                   score of 12.17."
FT   CDS             complement(553092..554324)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070123"
FT                   /product="gamma-glutamyl phosphate reductase"
FT                   /note="C1336_000070123 identified by Glimmer3 with a raw
FT                   score of 12.17. Gene function extrapolated from Cj0558c
FT                   (AL111168.1) after blastn alignment (97.51 percent identity
FT                   over a 402 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31416.1"
FT                   /translation="MRNLLENIKKNSQKLLNLTPKDKEKIILKLAQILRENFKIILEAN
FT                   KKDIANFTKSGTIKDRLLLDEKRILALCEGLEKIAYIEDPIGKISKAWKNYAGLSIQKI
FT                   SIPLGLICVIYEARPSLSAEIAALMIKSSNACVFKGGSEAKFTNKAIFTLVSKALKEFG
FT                   LQDCFAMFTQRDEIKQILTFDDLIDVIIPRGSSNMIQEIANNTKIPLIKQDKGLCHAFV
FT                   DQSANLDMALKIILNAKCQRVSVCNALETLLIHEKIAKNFISLLIPEFEKFKVKIHAHE
FT                   NALAYFNNSNLEVFKANENTFNTEWLDFALSVKLVKDCDEAIEHINKHSSLHSETIISN
FT                   DASNIAKFQRLINSSCIYANASTRFSDGGEFGFGGEVGISTSKLHARGPMGVEDICTYK
FT                   YIINGEGQIRE"
FT   gene            554395..555330
FT                   /locus_tag="C1336_000070124"
FT                   /note="C1336_000070124 identified by Glimmer3 with a raw
FT                   score of 13.63."
FT   CDS             554395..555330
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070124"
FT                   /product="pyridine nucleotide-disulphide oxidoreductase
FT                   family protein"
FT                   /note="C1336_000070124 identified by Glimmer3 with a raw
FT                   score of 13.63. Gene function extrapolated from CJE0663
FT                   (CP000025.1) after blastn alignment (96.44 percent identity
FT                   over a 926 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31417.1"
FT                   /translation="MKKIDLIIVGAGPTGIGCAVEAKLKNKEVLILEKSNNICQTLMQF
FT                   YKDGKRVDKAYKGCEGTNHGHVPFEDGTKESTIETFQNVLKEHNIEVEFGSEVESVKNE
FT                   NGVFLVSTAKGVYECKNIIVAIGRMGKPNKPDYKLPMTLTKIINFNANSVLGNEKILVV
FT                   GGGNSAAEYAVDLANSNQVSLCYRKKEFTRLNDINLKDIHEAGNSGKVELKLGIDINEV
FT                   EDDSGKAKVNFTDGTSDIYDRIIYAIGGSTPLDFLQKCGINVDDKGVPLMDENKQSNVK
FT                   GIFVAGDIATKNGASIVTGLNDAVKILSVL"
FT   gene            555538..556866
FT                   /locus_tag="C1336_000070125"
FT                   /note="C1336_000070125 identified by Glimmer3 with a raw
FT                   score of 11.71."
FT   CDS             555538..556866
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070125"
FT                   /product="MATE efflux family protein"
FT                   /note="C1336_000070125 identified by Glimmer3 with a raw
FT                   score of 11.71. Gene function extrapolated from
FT                   CJJ81176_0585 (CP000538.1) after blastn alignment (94.46
FT                   percent identity over a 596 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31418.1"
FT                   /translation="MSNIFSTLSPFRLFVKCAVPNVISMAFISFYYIVDGIFVGKYLGS
FT                   DALAALALIIPFIMMSFALADMIAIGSAVQISMHLGLGKKNLARKIFSSSMLIIFIISC
FT                   FIGILEYFLGPVLIDCLNVSDEIKTMTKECMFVFALFAPFTMLSFALDNYLRICGKTTY
FT                   SMIMNIIIALSNIVFDYLFIVVFGWGLFSVALATCLGIVLSGIFGIIPFLFQNLELKFS
FT                   SLYINLRIFKNILYNGSSEFFGNVSGSLYSIFANFVLLKISTTQAVAAFSIILYIDSFI
FT                   IMLIIAMGDAMQPALSYNYAKKDFLRIKAIIKVVFFAGGILSLFSIVFILIFGENLIAL
FT                   FAKENDQEFKTFAYTALMLFAFNYIFAWFNVLSGSFLTAFNKASFSLVLSLMQNLFMPL
FT                   FFLLLLSYFIGLNGVWLSPFFAEFCVLILAWIFLKRIFKDLSL"
FT   gene            complement(556916..557845)
FT                   /locus_tag="C1336_000070126"
FT                   /note="C1336_000070126 identified by Glimmer3 with a raw
FT                   score of 11.46."
FT   CDS             complement(556916..557845)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070126"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070126 identified by Glimmer3 with a raw
FT                   score of 11.46. Gene function extrapolated from C8J_0522
FT                   (CP000814.1) after blastn alignment (90.43 percent identity
FT                   over a 930 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31419.1"
FT                   /translation="MKKHLFSCILASILAQSAMAVDFQEGFSGNLSIGVGARDIKSNIS
FT                   TLADSDYLGGYDADNSDSSFIPFIGVELYYGNLIDNDRVFIKNYNGRDISGIALGYEKA
FT                   YLERFSTSFSVISSLREKAYANPYQIGNREETDVDRYGFKISQLYESDLGKFTASYLFS
FT                   KNKYDKDAVEYSSLKREGYYHEFELNYNYSLLNLGLSYDYNDADGKAQSYSRYGLSMGA
FT                   NLAFANDYIFTPNLSLSKYEAVGTDPIFHKKQDGNIVKLNLKVVKNQFLGYNGLYGFAN
FT                   YGIEKRNSDIGFYDETYQVVLTGIGYKF"
FT   gene            557808..557948
FT                   /locus_tag="C1336_000070127"
FT                   /note="C1336_000070127 identified by Glimmer3 with a raw
FT                   score of 1.92."
FT   CDS             557808..557948
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070127"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000070127 identified by Glimmer3 with a raw
FT                   score of 1.92. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31420.1"
FT                   /translation="MEAKIHENKCFFKCSPNKINVVIIIVTNITLNIYKKLKFIILSFF
FT                   R"
FT   gene            557985..559361
FT                   /locus_tag="C1336_000070128"
FT                   /note="C1336_000070128 identified by Glimmer3 with a raw
FT                   score of 11.60."
FT   CDS             557985..559361
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000070128"
FT                   /product="replicative DNA helicase"
FT                   /note="C1336_000070128 identified by Glimmer3 with a raw
FT                   score of 11.60. Gene function extrapolated from
FT                   JJD26997_1371 (CP000768.1) after blastn alignment (97.38
FT                   percent identity over a 191 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31421.1"
FT                   /translation="MQQEYYDLDLERAILSSCIMSEEAYASIAGDISPKDFSLKAHEDI
FT                   FKAIIACSNNKEPISISFLKKHKKIDEEILAEILATPSMIDLPAYVNELREKSIKRQLL
FT                   SFAHLLPARINENRAVSEIADEIGKEIFSITNRVNFRDIKDVNIIISELFEEFKKQKTL
FT                   ENKNIIGLDTGFEGLNKMTKGFKGGELIIIAARPGMGKTTLCLNFIDKVLRQNKGVALF
FT                   SLEMPATQIMQRMLSSKTSIPLQRILTADLNDDEWERLGDACNDYSQKKLYIYDSGYAT
FT                   IADVRAILRRLKSQDESIGLCVIDYIGLMMSNSNFNDRHLQVSEISRGLKLLARELDMP
FT                   IIALSQLNRGLEQRANKRPLMSDLRESGAIEQDADAILFVYRDEVYREQEEKERENKAK
FT                   AEGKAYQRLFIPNPMQENAEIIVGKNRNGPVGTIEVIFLKEKSCFVDKPIGYEATEFTG
FT                   "
FT   gap             561319..563423
FT                   /estimated_length=2105
FT   gene            complement(563438..563513)
FT                   /locus_tag="C1336_000080059"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(563438..563513)
FT                   /locus_tag="C1336_000080059"
FT                   /product="tRNA-Met"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(563547..563621)
FT                   /locus_tag="C1336_000080058"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(563547..563621)
FT                   /locus_tag="C1336_000080058"
FT                   /product="tRNA-Gln"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            563714..564733
FT                   /locus_tag="C1336_000080000"
FT                   /note="C1336_000080000 identified by Glimmer3 with a raw
FT                   score of 15.27."
FT   CDS             563714..564733
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080000"
FT                   /product="3,4-dihydroxy-2-butanone 4-phosphate synthase"
FT                   /note="C1336_000080000 identified by Glimmer3 with a raw
FT                   score of 15.27. Gene function extrapolated from C8J_0534
FT                   (CP000814.1) after blastn alignment (98.24 percent identity
FT                   over a 1020 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31240.1"
FT                   /translation="MKFVSVEQAIKDLQAGKMLVMVDAEDRENEGDLIFPAQFSTQEKV
FT                   NFMIKEARGVVCVALDETLAKKFELPLMVPKNTSNHETAFTITVDAKDATTGVSAYERN
FT                   MTIQIFADDNAKASDFVRPGHINPLIAKKGGVLERTGHTEGTVDLCKLAGLKGACVICE
FT                   IVKDDGDMARREDLEFFCQKHDLNMIAVSDLIEYRLKHESLIKLEEKSQSVLAGFKAEK
FT                   FIFSDHNQTQHIAFCFKDIKKCENVKFHISGSDFELLTSDKFSKLLEQIKFLSENGGVI
FT                   VFMQGEKSSTTQYKNYGIGAQILRYFGIEEIKLLSQSCDKDYIGLEGFGLNLKACNFN"
FT   gene            564745..565188
FT                   /locus_tag="C1336_000080001"
FT                   /note="C1336_000080001 identified by Glimmer3 with a raw
FT                   score of 17.67."
FT   CDS             564745..565188
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080001"
FT                   /product="GatB/YqeY family protein"
FT                   /note="C1336_000080001 identified by Glimmer3 with a raw
FT                   score of 17.67. Gene function extrapolated from C8J_0535
FT                   (CP000814.1) after blastn alignment (99.10 percent identity
FT                   over a 444 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31241.1"
FT                   /translation="MTLKEQILNDIKEAMKQKDDFKRDSLRTLNAAFKQIEVDERIELD
FT                   NERIYKIIASEIKKRKDAIELYLKANREDLAQKEQNEISLFEIYLPKQLSDEELTLALK
FT                   QLIEELGVSSLKEQGLVMKEAKIKLGASVDGKRLNLALKELLQ"
FT   gene            565206..566906
FT                   /locus_tag="C1336_000080002"
FT                   /note="C1336_000080002 identified by Glimmer3 with a raw
FT                   score of 15.77."
FT   CDS             565206..566906
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080002"
FT                   /product="acetolactate synthase, large subunit,
FT                   biosynthetic type"
FT                   /note="C1336_000080002 identified by Glimmer3 with a raw
FT                   score of 15.77. Gene function extrapolated from C8J_0536
FT                   (CP000814.1) after blastn alignment (97.47 percent identity
FT                   over a 1701 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31242.1"
FT                   /translation="MKELSGSAMICEALKEENVKIVFGYPGGAALNIYDEIYNQKYFKH
FT                   ILVRHEQAALHAADAYARMSGEVGVAIVTSGPGFTNTITGLATAYSDSIPLILISGQVA
FT                   NSLIGTDAFQEIDAVGISRPCVKHNYLVTCIEEFPRILKEAFYIARSGRPGPVHIDVPK
FT                   DVSATLGLWEYPKEISMKTYKPVYKGNSKQIKKFAELLKEAKRPLFYLGGGCISSNASE
FT                   QIRELVKFTKIPAVETLMALGTLRSDDVFNLKMAGMHGSYVANMALSECDLLVSVGARF
FT                   DDRITGKTSEFAKHATIVHVDIDPSSISKIINAHYPIVGDIKEVLKELLEELKKENFNT
FT                   TFKEWHETLKRYNELYPLSYEDSNEVLKPQWVIEECAKMAPDARIITDVGQHQMWVAQF
FT                   YPFNYPRQLATSGGQGTMGYSLPAALGAKLAVDEEVVINFVGDGSVLMNIQELMTAHEY
FT                   GIKTINIILNNAFLGMVRQWQSMFYKEHFSQTDLSTQPDFIKIAQGFGCEGYEISNKEE
FT                   FIQAFSQALKSDKTSLLNVKIDRFEDVLPMVPAGGAIYNMILPKAKDRQ"
FT   gene            566903..567367
FT                   /locus_tag="C1336_000080003"
FT                   /note="C1336_000080003 identified by Glimmer3 with a raw
FT                   score of 12.20."
FT   CDS             566903..567367
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080003"
FT                   /product="acetolactate synthase small subunit"
FT                   /note="C1336_000080003 identified by Glimmer3 with a raw
FT                   score of 12.20. Gene function extrapolated from C8J_0537
FT                   (CP000814.1) after blastn alignment (98.71 percent identity
FT                   over a 465 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31243.1"
FT                   /translation="MRRVLSVIVLNEHGVLSRIVGLFSGRGYNIDSLTVAPLENKEFSR
FT                   INIVTSGNERTFEQIVKQLHKLIPTYKVIESEEFIDKEMALVKIPLNENLGGLDAVLKA
FT                   YNGTIANSNENFLFLMVADDANRIDNFLKTIKKYNPSDIVRSGSVLMEIK"
FT   gene            567364..568329
FT                   /locus_tag="C1336_000080004"
FT                   /note="C1336_000080004 identified by Glimmer3 with a raw
FT                   score of 15.22."
FT   CDS             567364..568329
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080004"
FT                   /product="UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine
FT                   N-acyltransferase"
FT                   /note="C1336_000080004 identified by Glimmer3 with a raw
FT                   score of 15.22. Gene function extrapolated from CJE0679
FT                   (CP000025.1) after blastn alignment (97.41 percent identity
FT                   over a 965 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31244.1"
FT                   /translation="MKLSEIAEFLSLEYKGEDIEISALNSLLKANFTELTYCDGEKNTK
FT                   DIPHTGAAAILVSKEYENLVPKDTKALITQNPHLNFAFLSKLFAKPLISTAKEKVQNIA
FT                   KSARIMPNVYIGDNVNIGDNVIIMAGAYIGDNVSIGDESIIHPNVVIYNDTKIGKKCHL
FT                   LANCVIGSDGFGYAHNKNGEHYKIYHNGNVILEDFVEVGACTTIDRAVFDSTIIKAGTK
FT                   VDNLVQIGHNCNIGQNCIIVAQTGISGSSELGRNVIMGGQSATSGHLKIGDFSTIAARG
FT                   GVSKNLEGGRVYGGFPIMLQKDWLKLQAKIAINFKEKSQD"
FT   gene            complement(568318..569347)
FT                   /locus_tag="C1336_000080057"
FT                   /note="Features C1336_000080005, C1336_000080006 joined to
FT                   form C1336_000080057 to correct 454 sequencing error
FT                   (C1336_000080005 identified by Glimmer3 with a raw score of
FT                   5.61, C1336_000080006 identified by Glimmer3 with a raw
FT                   score of 12.78)."
FT   CDS             complement(join(568318..568632,568634..569347))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080057"
FT                   /product="S-adenosylmethionine:tRNA
FT                   ribosyltransferase-isomerase"
FT                   /note="Features C1336_000080005, C1336_000080006 joined to
FT                   form C1336_000080057 to correct 454 sequencing error
FT                   (C1336_000080005 identified by Glimmer3 with a raw score of
FT                   5.61, C1336_000080006 identified by Glimmer3 with a raw
FT                   score of 12.78). Gene function extrapolated from CJE0680
FT                   (CP000025.1) after blastn alignment (97.76 percent identity
FT                   over a 1029 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31245.1"
FT                   /translation="MNKDLLLSSYDYTLANELIANYPANPKEDARLLVFDRKNKEIFHT
FT                   TFKNLQDFLPNCAIFFNDTKVIKARIYGNKASGGKIELFLHQPFLNSHNPLFLAQIKGR
FT                   VKKDEILYFREDLKVRVVELLDDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYIK
FT                   REDEKSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKHEIYHLTLHVGAGTFKS
FT                   VECENIQKHKMHSEFFNIPQQACEIIDSKQAILGVGTTVTRTIEYYARTKTKNGFCDLF
FT                   LHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAML
FT                   IL"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(569340..570077)
FT                   /locus_tag="C1336_000080007"
FT                   /note="C1336_000080007 identified by Glimmer3 with a raw
FT                   score of 12.91."
FT   CDS             complement(569340..570077)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080007"
FT                   /product="Sec-independent protein translocase TatC"
FT                   /note="C1336_000080007 identified by Glimmer3 with a raw
FT                   score of 12.91. Gene function extrapolated from
FT                   CJJ81176_0606 (CP000538.1) after blastn alignment (99.25
FT                   percent identity over a 134 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31246.1"
FT                   /translation="MFEELRPHLIELRKRLFISVTCIVVMFIVCFALRSYILDILKAPL
FT                   IAVLPEVAKHVNVIEVQEALFTAMKVSFFAAFIFSLPVIFWQFWKFVAPGLYDNEKRLV
FT                   VPFVSFASIMFALGACFCYFVVVPLAFKFLINFGLNEDFNPVITIGTYVDFFTKVVVAF
FT                   GLAFEMPVIAFFFAKIGLIDDSFLKRHFRIAVLVIFVFSAFMTPPDVLSQFLMAGPLCG
FT                   LYGLSILIVQKVNPAPKDKESDE"
FT   gene            complement(570078..570485)
FT                   /locus_tag="C1336_000080008"
FT                   /note="C1336_000080008 identified by Glimmer3 with a raw
FT                   score of 13.76."
FT   CDS             complement(570078..570485)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080008"
FT                   /product="putative sec-independent protein translocase"
FT                   /note="C1336_000080008 identified by Glimmer3 with a raw
FT                   score of 13.76. Gene function extrapolated from C8J_0541
FT                   (CP000814.1) after blastn alignment (99.51 percent identity
FT                   over a 408 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31247.1"
FT                   /translation="MSFGEIIVILVVAILVLGPDKLPEAIVQIAKILKAVKRNIDDAKS
FT                   SIEKEIRINDLKEEAKKYKDEFSSTNENIRKKLSFEEFDDLKRDILDKTKVDLTFDSRD
FT                   DNTKNNLSGQNLNTEEKPNLSKLETQDKTEK"
FT   gene            complement(570544..571611)
FT                   /locus_tag="C1336_000080009"
FT                   /note="C1336_000080009 identified by Glimmer3 with a raw
FT                   score of 10.44."
FT   CDS             complement(570544..571611)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080009"
FT                   /product="oxygen-independent coproporphyrinogen III
FT                   oxidase, putative"
FT                   /note="C1336_000080009 identified by Glimmer3 with a raw
FT                   score of 10.44. Gene function extrapolated from CJE0683
FT                   (CP000025.1) after blastn alignment (98.40 percent identity
FT                   over a 812 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31248.1"
FT                   /translation="MHFYIHIPFCESKCNYCAFTSLKKNDYEKAYFKALKEDIVFQLKQ
FT                   FNIQSNQIKTLFIGGGTPSCVDAYNYEDIFKILYPLLDKNVEISCEANPNSATLNWLKN
FT                   MKNIGVNRISFGAQSFHPKKLHFLGRIHNQEMIIKALENANKIGFKNINLDLIYDTKLD
FT                   NKKMLEFELLYLKQIKALITHLSAYNLTIESNTAFAKKEHFKKNAPNLMKFFIKQLLEL
FT                   DFFQYEISNFSKTKAQICKHNLAYWQGKNYLACGLSAVGFYENKRFYTAKNLKNYIENP
FT                   TFRSIEQLSFKDLNLEHLFLGLRSIVGIDETKLNQWQKNKINILLKEKKLFYKNKRYFN
FT                   PNFLISDELALYLSS"
FT   gene            571712..572182
FT                   /locus_tag="C1336_000080010"
FT                   /note="C1336_000080010 identified by Glimmer3 with a raw
FT                   score of 10.09."
FT   CDS             571712..572182
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080010"
FT                   /product="(di)nucleoside polyphosphate hydrolase"
FT                   /note="C1336_000080010 identified by Glimmer3 with a raw
FT                   score of 10.09. Gene function extrapolated from
FT                   CJJ81176_0609 (CP000538.1) after blastn alignment (98.51
FT                   percent identity over a 471 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31249.1"
FT                   /translation="MENEKNYRPNVAAVILSSSYPFECKIFIARRSDMDNIWQFPQGGI
FT                   DKGESVKNALFRELKEEIGTDEVEIIAEYPEWLSYDFPSKIVKKMYPYDGQIQKYFLVR
FT                   LKHGATININTKHPEFDDYQFVSVKQIFEMINHFKKNIYVKVIKYFEEKGYI"
FT   gene            572184..573386
FT                   /locus_tag="C1336_000080011"
FT                   /note="C1336_000080011 identified by Glimmer3 with a raw
FT                   score of 14.49."
FT   CDS             572184..573386
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080011"
FT                   /product="aspartate kinase"
FT                   /note="C1336_000080011 identified by Glimmer3 with a raw
FT                   score of 14.49. Gene function extrapolated from C8J_0544
FT                   (CP000814.1) after blastn alignment (98.42 percent identity
FT                   over a 1203 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31250.1"
FT                   /translation="MLIVQKYGGTSVGTLERIEAVANRVIQSAQQGNQLVVVVSAMSGV
FT                   TNTLIEQAEYFSKTPNGKDMDMLLSSGERVTSALLSIALNEKGYPAISFSGRKAGIITD
FT                   SVFTKARIHHIDTKAIKSELQNGKIVVIAGFQGVDEEGNVTTLGRGGSDLSAVAVAGAL
FT                   NADLCEIYTDVDGVYTTDPRIEPKAKKLDKISYEEMLELASLGAKVLQNRSVELAKKLN
FT                   VNLVTRSSFNNNEGTMITKEDGMEQALVSGIALDKNQARVTLRNVEDKPGIAAEIFSVL
FT                   ANENINVDMIIQNVGVDGATNLGFTVPQNELELAKNAMQKILSSKTTIESDSAVVKVSI
FT                   VGVGMKSHSGVASKAFKALADEGINIGMISTSEIKISMIVHEKYGELAVRALHECYGLD
FT                   K"
FT   gene            573387..573923
FT                   /locus_tag="C1336_000080012"
FT                   /note="C1336_000080012 identified by Glimmer3 with a raw
FT                   score of 11.06."
FT   CDS             573387..573923
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080012"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000080012 identified by Glimmer3 with a raw
FT                   score of 11.06. Gene function extrapolated from CJE0686
FT                   (CP000025.1) after blastn alignment (99.63 percent identity
FT                   over a 537 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31251.1"
FT                   /translation="MSDFLSFTLENIRNGGAFMAWLESRRLEWAPLMAARLKYLLEGRT
FT                   FVLMCDEQRSWYEEYFLKNINSKAARPMLPFVSLNSLCKKKVQSSEDIALLNDLLDISF
FT                   PNGYVYFYIGSASDNKSLIAKSRDDSLLWLFDEQLQDSFYLNSKDKDLDIKLISLYQLF
FT                   DVSLDAILFSKVQLG"
FT   gene            573929..574528
FT                   /locus_tag="C1336_000080013"
FT                   /note="C1336_000080013 identified by Glimmer3 with a raw
FT                   score of 14.80."
FT   CDS             573929..574528
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080013"
FT                   /product="DNA polymerase III, delta prime subunit-like
FT                   protein"
FT                   /note="C1336_000080013 identified by Glimmer3 with a raw
FT                   score of 14.80. Gene function extrapolated from C8J_0546
FT                   (CP000814.1) after blastn alignment (99.56 percent identity
FT                   over a 227 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31252.1"
FT                   /translation="MFISKIIISEDFLGIKEEMINNFGIKKLRFFMPQNEFLLDDARAV
FT                   EKESYIAETEEKIIVLMADSYRIEAQNFLLKLLEEPPKNIKFLIVIPSKNLLLPTIKSR
FT                   LICEKRKVEKEVKKLDLDLKRMDLRMLFDFLQKNENLDKNELMDQIALLAKECVKYKDF
FT                   NAEELEFFYESYELAKLNSKSGVLLATLLLNYYTKK"
FT   gene            574530..575672
FT                   /locus_tag="C1336_000080014"
FT                   /note="C1336_000080014 identified by Glimmer3 with a raw
FT                   score of 15.37."
FT   CDS             574530..575672
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080014"
FT                   /product="dihydropteroate synthase"
FT                   /note="C1336_000080014 identified by Glimmer3 with a raw
FT                   score of 15.37. Gene function extrapolated from
FT                   CJJ81176_0613 (CP000538.1) after blastn alignment (98.98
FT                   percent identity over a 293 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31253.1"
FT                   /translation="MKLFKINPNTDFNLLCSFINPHKMGQKIMSEKTKIHFIFIKDIST
FT                   PAANILKQDALRVGAELITHKEVITAKITHSNALLMASKEQIQKLIAKEKLQDFGLKNL
FT                   ALFLQKDFLKPKKAELMAVINVNEDSFNAKSRVSEEDFEKRLNDFLALRPEYIDIGAVS
FT                   SRPGSEYCGKEEEFKRLKKVLDLIYEKNYHEKAIFSLDSFDEYCLEYALNKGFKLINDI
FT                   TSLRNLNLAKLASKYEAKYCLMHMQNNPNNMQDNPFYEDLLDEMTLFFKEKLELLESFG
FT                   VKESILDVGIGFGKSAEHNMILIKHLEHFLQFNKPLLIGASRKSVINAYFQSEIKDRLA
FT                   GTLYLHLKAFENGASIIRVHDLYEHKQLFALAQAMDNIGV"
FT   gene            575673..577616
FT                   /locus_tag="C1336_000080015"
FT                   /note="C1336_000080015 identified by Glimmer3 with a raw
FT                   score of 13.76."
FT   CDS             575673..577616
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080015"
FT                   /product="DNA ligase, NAD-dependent"
FT                   /note="C1336_000080015 identified by Glimmer3 with a raw
FT                   score of 13.76. Gene function extrapolated from CJE0689
FT                   (CP000025.1) after blastn alignment (96.71 percent identity
FT                   over a 1944 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31254.1"
FT                   /translation="MKKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRVFEE
FT                   QNKDEISKDSPTQKIAPIIQSEFKKIAHLKRMWSMEDVFDESELRAWAKRAKCEKNFFI
FT                   EPKFDGASLNLLYENGKLVSGATRGDGEVGEDITLNVFEIENIPKNIAYKERIEIRGEV
FT                   VILKDDFEKINEKRALLNQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGENTLN
FT                   FTKHSEVMQFIRELGFLKDDFVRLCANLDEVLKAYDELLALREKKPMMMDGMVVRVDDL
FT                   ELCEELGYTVKFPKFMAAFKFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVNLDGVVV
FT                   KSATLHNFDEIARLDVKINDFVSVIRSGDVIPKITKVFKERREGLEMEILRPKLCPTCQ
FT                   SELLDEGTLIKCQNIDCEDRLVNSIIHFVSKKCLNIDGLGENIVELLYKHKKITTLESI
FT                   FHLKFSDFEGLEGFKEKKINNLLNAIEQARECELFRFITALGIDHIGEVAAKKLSLSFN
FT                   KEWHKQSFEAYANLEGFGEQMALSLCEFTRVNHTRIDEFYKLLNLKIEKLEIKSDSVIF
FT                   GKTFVITGTLSRPRDEFKALIEKLGGKVSGSVSKKTDYVLFGEEAGSKLSKAKELEVKC
FT                   IDESAFNELVKE"
FT   gene            577603..578601
FT                   /locus_tag="C1336_000080016"
FT                   /note="C1336_000080016 identified by Glimmer3 with a raw
FT                   score of 9.29."
FT   CDS             577603..578601
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080016"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000080016 identified by Glimmer3 with a raw
FT                   score of 9.29. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31255.1"
FT                   /translation="MLKNSSYILTLLSLFGFLLTWQRSAFSLFFLIPIFLTLFWEFFLF
FT                   LKLRKNIIKEATLIKGSLFYRISMGDFYLYIFSFFLAIFGLVSLFLNFLNLEKIDLVFI
FT                   FIILPLLMIFLKKELHLQFVNNAYNDFRIVVIASFFTALFYAFYGLFFTYNELLNLELF
FT                   SRKIIAYKSASFVYFDFLSEFLYFVSNLKLFIFSHFGYLSFRALNFIFDFFNFFMFCSL
FT                   LAFVFNFVLKIKIKIIVLFLCFIMVLGSYFLKEQRNNTLKSEQEQILLWMNNFNFLKDY
FT                   NLSLIQKEKDLFEKDLKDLREIFKKNAFEIGIWWFSKEKEDLEKRINESLK"
FT   gene            578598..579359
FT                   /locus_tag="C1336_000080017"
FT                   /note="C1336_000080017 identified by Glimmer3 with a raw
FT                   score of 11.43."
FT   CDS             578598..579359
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080017"
FT                   /product="hemolysin A"
FT                   /note="C1336_000080017 identified by Glimmer3 with a raw
FT                   score of 11.43. Gene function extrapolated from
FT                   JJD26997_1081 (CP000768.1) after blastn alignment (98.72
FT                   percent identity over a 156 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31256.1"
FT                   /translation="MRFDFFVSKRLNISRNKALELIESEEVLLNGKSFKASFDVKNFLE
FT                   NLKKTQDLNPEDILLANELKLNLLSEIYVSRAALKLKNFLEENDIEIKQKNCLDIGSST
FT                   GGFVQILLENQALKITALDVGSNQLHSNLRTNEKVILHENTDLRAFKSEEKFEFITCDV
FT                   SFISLINLLYYIDNLALKEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDFEKAC
FT                   AKLGWLLKNTQKSSIKGKEGNVEYFYYYIKN"
FT   gene            579325..580179
FT                   /locus_tag="C1336_000080018"
FT                   /note="C1336_000080018 identified by Glimmer3 with a raw
FT                   score of 9.66."
FT   CDS             579325..580179
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080018"
FT                   /product="putative riboflavin kinase /FMN
FT                   adenylyltransferase"
FT                   /note="C1336_000080018 identified by Glimmer3 with a raw
FT                   score of 9.66. Gene function extrapolated from C8J_0551
FT                   (CP000814.1) after blastn alignment (96.60 percent identity
FT                   over a 852 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31257.1"
FT                   /translation="MLNIFTTISKINITSLAIGCFDGIHLGHLKLVKCLDENGALLVIN
FT                   KFKGQFLCSNRQKEEISGKKVIEVDFESIKSLDGKDFLSFLKKEFINLKFIVVGYDFSF
FT                   GKNRAYSAKDIESLSGIKTIIVDEFSIGGVGVHASLIKDFLSKANLQKAKEFLGRDYSI
FT                   KGKLIKGQGLGSKELFATINLDCKGYFLPQNGVYATLLKSQKNIYKSVSFLGVRSSDEN
FT                   FAIESHILEELGENFTQEEFFELEFISFLRENQKFQDLKKLKNQIAKDIEQARELLRKN
FT                   DER"
FT   gene            580169..580876
FT                   /locus_tag="C1336_000080019"
FT                   /note="C1336_000080019 identified by Glimmer3 with a raw
FT                   score of 15.86."
FT   CDS             580169..580876
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080019"
FT                   /product="putative methyltransferase"
FT                   /note="C1336_000080019 identified by Glimmer3 with a raw
FT                   score of 15.86. Gene function extrapolated from
FT                   JJD26997_1078 (CP000768.1) after blastn alignment (97.03
FT                   percent identity over a 708 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31258.1"
FT                   /translation="MKDELFKQSPKKQFEFDKSVASVFDDMINRSVPFYRENLELCANL
FT                   LAKILLANASICDLGCSSANFLILLANLRKDFKLFGVDNSASMLEVAKSKTKAYGLDIS
FT                   FFEANLCEFDFFTCDVFVANYTMQFIRPPKRQELLDKIYKNLNPKGILIMSEKILYEDA
FT                   FLSKNIIELYADYKEKQGYSKFEIAAKREALENVLIPYSQKENLNMLEKAGFKKIESIF
FT                   KWANFETFIAFKD"
FT   gene            complement(580866..581081)
FT                   /locus_tag="C1336_000080020"
FT                   /note="C1336_000080020 identified by Glimmer3 with a raw
FT                   score of 8.65."
FT   CDS             complement(580866..581081)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080020"
FT                   /product="lipoprotein, putative"
FT                   /note="C1336_000080020 identified by Glimmer3 with a raw
FT                   score of 8.65. Gene function extrapolated from
FT                   CJJ81176_0619 (CP000538.1) after blastn alignment (98.47
FT                   percent identity over a 196 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31259.1"
FT                   /translation="MKITLFLSLIGIFFAACEQTKSVEYYQNHPEEAKKRSLECRHKAI
FT                   ISQDCVNAYKVGFPKDEWENENISNP"
FT   gene            complement(581078..581518)
FT                   /locus_tag="C1336_000080021"
FT                   /note="C1336_000080021 identified by Glimmer3 with a raw
FT                   score of 10.05."
FT   CDS             complement(581078..581518)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080021"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000080021 identified by Glimmer3 with a raw
FT                   score of 10.05. Gene function extrapolated from C8J_0554
FT                   (CP000814.1) after blastn alignment (97.01 percent identity
FT                   over a 134 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31260.1"
FT                   /translation="MQKLSILLTILIIINITACDSKTENYYKNHPSEAKEKAKECKESG
FT                   TLSEDCINALKVGIKPTNEGSKYSPNTPKKSDNQISEALKQNDLKKEKITKDINQSSEN
FT                   NESIIMPPIAETPSEIYPSKTTENNQSSIFSDDINITQEKLP"
FT   gene            complement(581577..582209)
FT                   /locus_tag="C1336_000080022"
FT                   /note="C1336_000080022 identified by Glimmer3 with a raw
FT                   score of 12.24."
FT   CDS             complement(581577..582209)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080022"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000080022 identified by Glimmer3 with a raw
FT                   score of 12.24. Gene function extrapolated from C8J_0555
FT                   (CP000814.1) after blastn alignment (97.47 percent identity
FT                   over a 633 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31261.1"
FT                   /translation="MEINALTITTLYIIGISAEGMTGALAAGRHKMDLFGVIFIALVTA
FT                   IGGGSIRDVLLGHYPLTWVKHPEYIILICFCALIATKIPRVVTKLETLFLTLDAIGLVV
FT                   FSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAIIAGA
FT                   IYYSLIMWLELNALVCTLLTLFIGVIARLLAIKYQWSLPIFSYNEEK"
FT   gene            complement(582220..582870)
FT                   /locus_tag="C1336_000080023"
FT                   /note="C1336_000080023 identified by Glimmer3 with a raw
FT                   score of 7.99."
FT   CDS             complement(582220..582870)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080023"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000080023 identified by Glimmer3 with a raw
FT                   score of 7.99. Gene function extrapolated from C8J_0556
FT                   (CP000814.1) after blastn alignment (97.94 percent identity
FT                   over a 194 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31262.1"
FT                   /translation="MKIFIFLLAISLNIFALESYKPSADFSSYFNNTNCSQILDKFFYL
FT                   NCYDYKLKGTKAVAYKVEASNLKNKQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYTRGH
FT                   TAPNASFSFSKAAQNSVFLMSNITPQNAQINNIIWNEIEQRERNLALKFQSIEVLNLVL
FT                   YNKEPQYIKNRIAIPSFYVKIIKTPKFKECYQVPNHEVNDENIKQYQINCDKF"
FT   gene            complement(582867..583493)
FT                   /locus_tag="C1336_000080024"
FT                   /note="C1336_000080024 identified by Glimmer3 with a raw
FT                   score of 11.38."
FT   CDS             complement(582867..583493)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080024"
FT                   /product="endonuclease III"
FT                   /note="C1336_000080024 identified by Glimmer3 with a raw
FT                   score of 11.38. Gene function extrapolated from Cj0595c
FT                   (AL111168.1) after blastn alignment (97.13 percent identity
FT                   over a 627 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31263.1"
FT                   /translation="MKRNLEIKELFLKHFEKPVTELKFSNLYELLVCVMLSAQCTDKRV
FT                   NLITPDLFKAYPDIKSLANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEIPL
FT                   DEQNLKSLAGVGQKTAHVVLIEWCGANFMAVDTHVFRVSHRLGLSKAKTPEATEEDLTR
FT                   IFKDNLNYLHQAMVLFGRYTCKAKKPLCKECFLNHLCKSKDKELK"
FT   gene            583574..584395
FT                   /locus_tag="C1336_000080025"
FT                   /note="C1336_000080025 identified by Glimmer3 with a raw
FT                   score of 16.11."
FT   CDS             583574..584395
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080025"
FT                   /product="major antigenic peptide PEB4"
FT                   /note="C1336_000080025 identified by Glimmer3 with a raw
FT                   score of 16.11. Gene function extrapolated from
FT                   CJJ81176_0624 (CP000538.1) after blastn alignment (97.57
FT                   percent identity over a 822 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31264.1"
FT                   /translation="MKKFSLVAAALIAGVALNVNAATVATVNGKSISDTEVSEFFAPML
FT                   RGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVYQD
FT                   KILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELD
FT                   AKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPIKTNFGYH
FT                   VILKENSQAKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK"
FT   gene            584395..585459
FT                   /locus_tag="C1336_000080026"
FT                   /note="C1336_000080026 identified by Glimmer3 with a raw
FT                   score of 14.33."
FT   CDS             584395..585459
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080026"
FT                   /product="fructose-bisphosphate aldolase"
FT                   /note="C1336_000080026 identified by Glimmer3 with a raw
FT                   score of 14.33. Gene function extrapolated from C8J_0559
FT                   (CP000814.1) after blastn alignment (98.43 percent identity
FT                   over a 700 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31265.1"
FT                   /translation="MGVLDIVKAGVISGDELNKVYDYAKAEGFAIPAVNVVGTDSINAV
FT                   LEAAKKVNSPVIIQFSNGGAKFYAGKNCPNGEVLGAISGAKHVHLLAKAYGVPVILHTD
FT                   HAARKLLPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEENLNTCEVYLQKLDALG
FT                   VALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAYERLGKISDKFSIAASFGNVHG
FT                   VYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELKDIKDAVSYGVIKM
FT                   NIDTDTQWAFWDGVREYELKNRAYLQGQIGNPEGDDKPNKKYYDPRVWLRSGEESMIKR
FT                   LEVAFEDLNCINKN"
FT   gene            585554..586996
FT                   /locus_tag="C1336_000080027"
FT                   /note="C1336_000080027 identified by Glimmer3 with a raw
FT                   score of 12.94."
FT   CDS             585554..586996
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080027"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000080027 identified by Glimmer3 with a raw
FT                   score of 12.94. Gene function extrapolated from C8J_0560
FT                   (CP000814.1) after blastn alignment (98.10 percent identity
FT                   over a 1050 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31266.1"
FT                   /translation="MEIKSDEISELVLPEGKDARGSLVYFKIIFIPAFLYILILLGYFN
FT                   VIDFKVELHTVIMTGVIFFTALIFARHSAEYAYSIFEQQKDEFKQALKRHIMRHFLAIG
FT                   KDTKSNANFDDFAYAYIKGARNENFASIGSAIFPMMGILGTFISIAFSMPNFSSSNTAA
FT                   LEQEIADLLSGVGTAFYVSIYGIFLALWWMFFEKYGKSKIDRLLNRQKNATSGFFWTKE
FT                   ELDQRYLTESLQHFEKIGAIFKQVSNDDFFAELDHAIDRKFGIFQDMLNVEEKAIRLSS
FT                   EHIKQTMGELSKAQRDQRDLGKLYSEMLNGIGLLNQNLKEINTRMSEQYNRLLDISSDK
FT                   IHHLDKTLSAFDEKVERFGKNFELYEKAMLESQEKVFEGFKASLFEGMHKFKEVYEEEK
FT                   SIDAKIKMMDELKKEMKALDEETSQMMSKLSGDENQNKKNETKQIEDFSESKTEENQDK
FT                   IQAEISKQESNNELKNEDKENK"
FT   gene            586993..587946
FT                   /locus_tag="C1336_000080028"
FT                   /note="C1336_000080028 identified by Glimmer3 with a raw
FT                   score of 14.94."
FT   CDS             586993..587946
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080028"
FT                   /product="chemotaxis protein MotB, putative"
FT                   /note="C1336_000080028 identified by Glimmer3 with a raw
FT                   score of 14.94. Gene function extrapolated from CJE0702
FT                   (CP000025.1) after blastn alignment (99.60 percent identity
FT                   over a 502 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31267.1"
FT                   /translation="MKNESKEDSNFWIAYADLMAGLLFVFILLIGAIVVKYVLTQSDLK
FT                   EIKDNLNKQEARLEESKEELRNKEAIVFKLSSDLNNASSALNLANSQKAELEANITNYK
FT                   QLSKDLNSTLDNKDKQILILLGQLEKKDEELKNLQEDFQKAKEKVQNLGLIRENLSKEL
FT                   QSKLDNNITIDEKTGSISLPAEVLFDKDSYVLKNEAKASLRKILSEYFDAILEDPKIFS
FT                   NIENIIIEGHTDSDGSYIYNLDLSQKRAYEVMNFIYTFYKSDKLQKLLMASGRSFSDPV
FT                   FVNGVEDKDKSRRIEIKFSIKNDNALKDVEKFFEFH"
FT   gene            587933..588808
FT                   /locus_tag="C1336_000080029"
FT                   /note="C1336_000080029 identified by Glimmer3 with a raw
FT                   score of 12.13."
FT   CDS             587933..588808
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080029"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000080029 identified by Glimmer3 with a raw
FT                   score of 12.13. Gene function extrapolated from
FT                   CJJ81176_0628 (CP000538.1) after blastn alignment (99.20
FT                   percent identity over a 876 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31268.1"
FT                   /translation="MNFIKTISPIQKINFNGFEFYIKRDDLLGEINGNKARKLAFYIHQ
FT                   RYPKNQSFVSYGGSQSNALAALSIFAKQRSCKLVFACEKISTFLKSNPCGNYALALENG
FT                   VDFVENIHSLSLKQFALSLCKKDDIFIEQGIANLEAQYGYMELAQEIQMQSQSLKLDFD
FT                   IFLPSGTGTSAAFLAKYSKFKVFTCACVGDIKYLKKQILTLDPSYDFSNLEFLTSDKKY
FT                   HFAKPYKEFYELYMDLKLKCNIEFDLLYDILGLSIALKQEWKKPLLYIHQGGILGNSTM
FT                   LERYKFKKLV"
FT   gene            complement(588800..590143)
FT                   /locus_tag="C1336_000080030"
FT                   /note="C1336_000080030 identified by Glimmer3 with a raw
FT                   score of 10.30."
FT   CDS             complement(588800..590143)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080030"
FT                   /product="sodium-dependent transporter, putative"
FT                   /note="C1336_000080030 identified by Glimmer3 with a raw
FT                   score of 10.30. Gene function extrapolated from CJE0704
FT                   (CP000025.1) after blastn alignment (99.11 percent identity
FT                   over a 1119 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31269.1"
FT                   /translation="MQRQTWSSTLTYILTVAGATIGFGATWRFPYLVGENGGGAYVLVF
FT                   CIAMIIIGIPVILVENVIGRKAMTNSVDAFKQKWQSIGYMGLLGSFGIMAYYMVLGGWV
FT                   LVYIWELTLGNFSLANVVSKEFTHQFFNDKIAFNPLGVGIFTTVFVIINYIILKRGIID
FT                   GIEKSVKFLMPLLFICLIIVVGRNLTLDGAMAGVKFYLEPDFSKILSPKLLIDVLGQVF
FT                   FALSLGFGVMITLSSHLNKNENMAKTAIYTGVLNTIIAVLAGFMIFPALFSAGLAPDSG
FT                   PSLVFETLPIAFSHIHFGTIVCILFFVLLLIAALTTSLPIYQVIISVLEEKFKYSKNLS
FT                   INLTLGFIFILGNLPCILTYGPWRDIVIIKGKNIFDSFDFISGNILFVLTAFFCCIYVG
FT                   WILGKQESLKELSNNDTLKSPWFGIWFYYVKYIVPLIILIIFIYGILN"
FT   gene            complement(590298..590627)
FT                   /locus_tag="C1336_000080031"
FT                   /note="C1336_000080031 identified by Glimmer3 with a raw
FT                   score of 5.07."
FT   CDS             complement(590298..590627)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080031"
FT                   /product="MOSC domain protein"
FT                   /note="C1336_000080031 identified by Glimmer3 with a raw
FT                   score of 5.07. Gene function extrapolated from C8J_0564
FT                   (CP000814.1) after blastn alignment (98.47 percent identity
FT                   over a 326 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31270.1"
FT                   /translation="MGENLSINGLCEQNVCIGDIHQISNAILQVSEPRKPCVKISKIHN
FT                   NPNFTHEIFKTGLSGWYYKVLQVGQIRKHENIKILEKNSTSLSVFELSQLFYSPHQALR
FT                   QNPIF"
FT   gene            complement(590855..592558)
FT                   /locus_tag="C1336_000080032"
FT                   /note="C1336_000080032 identified by Glimmer3 with a raw
FT                   score of 12.47."
FT   CDS             complement(590855..592558)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080032"
FT                   /product="thiol:disulfide interchange protein DsbD"
FT                   /note="C1336_000080032 identified by Glimmer3 with a raw
FT                   score of 12.47. Gene function extrapolated from
FT                   CJJ81176_0631 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 83 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31271.1"
FT                   /translation="MRIFGIILLSFCLCFASILSLNEAFNVKSNSYNNSISIDIELGKD
FT                   IYLYSNKLKLYINEKDISSLINLPQSSTRGNENVYYQKLNLALPNLLLERFAKNTTNLI
FT                   KLEFQGCSEQGLCYNPQTWYFDLISKKDAFEISKPYKTQKTDKKTKIESEESSIANFLA
FT                   TDNFFWILLSFFGYGLLLSLTPCILPMIPILSSLIVAKSNAKFSKKHSFFLSFIYVFFM
FT                   SLAYAIAGVIASFLGASIQGILQKPIILILFALIFIAFAFAMFGAFRFELPLRFQTFIH
FT                   KKSEKGKGVVGIAIMGFLSALIVGPCVAAPLAGALIYIANTGNALLGGSALFIMSFGMG
FT                   IPLLFIGLGLGFIKPGFWMEKVKIFFGFVMLAMTIWILSRIIEENYILIAYGILGVFFS
FT                   VFMGIFEKSFTIISKIKKSILILILAYSLSIFLGGLFGAKNFLNPLNFNTISASKPTLS
FT                   YDYINNFEQLKQEIQTNTKPIMLDFTASWCENCKLLDELTFSDERIIQKMQNYKLIKVD
FT                   VSENNNEQIKTMKEFNVFGPPVLIFFENGKEKLKITGFISADDLLKKLEP"
FT   gene            592652..593533
FT                   /locus_tag="C1336_000080033"
FT                   /note="C1336_000080033 identified by Glimmer3 with a raw
FT                   score of 10.23."
FT   CDS             592652..593533
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080033"
FT                   /product="putative polyphosphate kinase"
FT                   /note="C1336_000080033 identified by Glimmer3 with a raw
FT                   score of 10.23. Gene function extrapolated from Cj0604
FT                   (AL111168.1) after blastn alignment (98.96 percent identity
FT                   over a 383 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31272.1"
FT                   /translation="MQENNSSKTQGAVKKNEIYISVKRKKSTIEYEKDLKNLQIELLKF
FT                   QNHVKAKGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQWYFQR
FT                   YIAHLPSAGEIVIFDRSWYNRAGVEPVMGFCTPQQHKDFLREVPLFENMISNSDIIFFK
FT                   FYFSVSKDEQKKRFEKRRSDPLKQYKLSPVDQKSQELWDKYTLAKYSMLLASNTPTCPW
FT                   TIISSDDKKKARLNLLRFILSKVEYPNKKTGDFSKIDAKLVRSGEEEIRKMEANLEKLD
FT                   SKKADEKIKDLD"
FT   gene            593542..594732
FT                   /locus_tag="C1336_000080034"
FT                   /note="C1336_000080034 identified by Glimmer3 with a raw
FT                   score of 15.08."
FT   CDS             593542..594732
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080034"
FT                   /product="putative amidohydrolase"
FT                   /note="C1336_000080034 identified by Glimmer3 with a raw
FT                   score of 15.08. Gene function extrapolated from C8J_0567
FT                   (CP000814.1) after blastn alignment (99.35 percent identity
FT                   over a 154 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31273.1"
FT                   /translation="MHKLVENLALKYYDKVVDLRHQIHMHPELEFEEENTAHLVCKILD
FT                   EFGIKYQKNIAKTGILAIIEGKKKSQKKPKCVLLRADMDALPVQEKTNLSYASKIDGKM
FT                   HACGHDGHTAGLLGAALILNELKDEFCGTIKFMFQPAEEGSGGAKPMIESGVLENPYVD
FT                   AVFGCHLWGPLLENTAQIVSGEMMAGTDIFDLEFIGRGGHGAHPHTCIDPIIMATQFVN
FT                   NIQSVVSRRLAPCEAGVITVGQICAGTTYNVIPTNAYLKGTVRFLNDKTQDILKSSLEE
FT                   VAAATAKSNGGDYKLKYTKEFPPLINDEKAALIARKAFAKVLGEENIIVSSKPDMGAED
FT                   FAFLTRERMGAYVFVGISKDLNHPALHHSSTFCWDDENLKVLMQGDVMMALEFLNL"
FT   gene            594811..595983
FT                   /locus_tag="C1336_000080035"
FT                   /note="C1336_000080035 identified by Glimmer3 with a raw
FT                   score of 14.88."
FT   CDS             594811..595983
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080035"
FT                   /product="macrolide-specific efflux protein macA"
FT                   /note="C1336_000080035 identified by Glimmer3 with a raw
FT                   score of 14.88. Gene function extrapolated from
FT                   CJJ81176_0635 (CP000538.1) after blastn alignment (98.96
FT                   percent identity over a 1053 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31274.1"
FT                   /translation="MKKKIVLIILIAILGSVGAYFIFFNNDEKISYLTQKIQKKDISQT
FT                   IEAVGKVYAKDQVDVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDITKAQL
FT                   ESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELNAQV
FT                   VQLEITLKNAQKDLGYTTITAPMDGVVINVAVDEGQTVNANQNTPTIVRIANLDEMEVR
FT                   MEIAEADVSKIKVGTELDFSLLNDPQKTYHAKIASIDPADTEVSDSSTSSSSSSSSSSS
FT                   SSSSNAIYYYAKFCVANKDDFLRIGMSIQNEIVVASAKAVLAVPTYAIKSDPKGYYVEI
FT                   LENQKAVKKYVKLGIKDSINTQILEGVNENEELIVSSSADGLAPKMKLRF"
FT   gene            595983..597908
FT                   /locus_tag="C1336_000080036"
FT                   /note="C1336_000080036 identified by Glimmer3 with a raw
FT                   score of 14.99."
FT   CDS             595983..597908
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080036"
FT                   /product="macrolide-specific efflux protein macB"
FT                   /note="C1336_000080036 identified by Glimmer3 with a raw
FT                   score of 14.99. Gene function extrapolated from CJE0710
FT                   (CP000025.1) after blastn alignment (97.74 percent identity
FT                   over a 1019 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31275.1"
FT                   /translation="MIFLKNICKNIGENAILKNVSLSIEKGEFVAIIGQSGSGKTSLLN
FT                   IIGTLDTPSSGTYIFDEYEVTKLNNDEKARLRREKIGFIFQRYNLLSLLSAKENVSLPA
FT                   VYAGKNLQERSQNAKKLLNDLELAHKLDSKPNELSGGQQQRVSIARALMNGGELILADE
FT                   PTGALDSKSGIMVLEILQKLNTQGHTIVLVTHDPKIAAQAKRVIEIKDGEILSDTKKEK
FT                   AQEKLILKTMSKEKKTLTLLKNQAFECFKIAYSSILAHKLRSILTMLGIIIGIASVVCV
FT                   VALGLGSQAKVLESIARLGTNTIEIRPGKGFGDLRSGKTRLNFSDLETLRSLEYLEAVD
FT                   AHSNTSGVATYTNISLSARAEGVGVNNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNA
FT                   KKNLFPNEKSENILGRVVLFNSQPFKIIGVLQKDTDKPIEDNVVRLYIPYTTLMNKLTG
FT                   DRNLREIIVKVKDDVSSTLAENAIIRILEIKRGQKDFFTFNSDTFKQAITANKRTTTIL
FT                   TACVAVIALIVGGIGVMNIMLVSVSERTREIGIRMAIGARREDIMMQFLIEAVMICTIG
FT                   AILGVILSIFIIFAFNTLSTDFPMILNAYSVLLGLLSSMFIGVVFGFFPARNAANLNPI
FT                   SALSKE"
FT   gene            597910..599280
FT                   /locus_tag="C1336_000080037"
FT                   /note="C1336_000080037 identified by Glimmer3 with a raw
FT                   score of 14.00."
FT   CDS             597910..599280
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080037"
FT                   /product="outer membrane efflux protein"
FT                   /note="C1336_000080037 identified by Glimmer3 with a raw
FT                   score of 14.00. Gene function extrapolated from
FT                   CJJ81176_0637 (CP000538.1) after blastn alignment (97.62
FT                   percent identity over a 1343 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31276.1"
FT                   /translation="MKIILSIFLTFFLSACGAKLSLPKEVDLTQEQMKDLNLTYDWYKS
FT                   YDNAKLNEFLNFVLLNNSDINIARKTLLSALARADLIDYDLYPTLSGNLGFGVDKDLNS
FT                   GKQSKNFNNSLNLSYELDIYGKLRDSASASEFSAKASAYDLENLKISMINTALNDVFEL
FT                   AYFNDVDKLLRAYLSNLEQMKELYSYKYELGKIEELDLLNIEQSLLRAKQNLLSNDQNR
FT                   NLLIKNLQDLLAKQEGFAYIEYFKTLSLNDFKTLSPDFNIPLKALAYRADVRSKLNSLK
FT                   SAFKDYSSMQKSILPSISLGGALSGSDKKIDDSFKFEILSGNVKISLPFLDYGRVKQNI
FT                   KISQFTYEQLLISYEQALQSAMNEFVLNYKDYQSDTLLLQNLQSINIKQELITKTYYEK
FT                   YILGKSELKDYLDANNTLNSTQQEFLRARFNLLKTINSYYQITALSFNDESLEFPKY"
FT   gene            complement(599283..600461)
FT                   /locus_tag="C1336_000080038"
FT                   /note="C1336_000080038 identified by Glimmer3 with a raw
FT                   score of 10.73."
FT   CDS             complement(599283..600461)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080038"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000080038 identified by Glimmer3 with a raw
FT                   score of 10.73. Gene function extrapolated from C8J_0571
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 143 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31277.1"
FT                   /translation="MLVNKFKIILLFFIIFTSSYAQNLNTNDTIDSILNQNKNHSALTS
FT                   YVLKKDLKNLEKKLEKNQNIGIRIYGDSHMAADFFPRVIRGYLIRSNSIGFAYPLQPKY
FT                   QQNLNLVYSYKNFEILNSRNPANAGHNFPLGGIIAKAKIKGAKINLDTTLDKKKFKIGF
FT                   LFKAKQNTNAFSIKDAKNQSYELRTTQINKWSYKELELDLPLQISALQKDAELGGYFIT
FT                   NKDNNVFLDTIAINGAKSDLWLSWNQAVVKKELELLHNDLIILAYGSNDALFKGFEKQK
FT                   FKNNLKKWISILKTYNKNAVIMLISPPTIVQKQGKNYKLAPDFFTIRKALYEVAKEEKT
FT                   LIFDMHQFMQDSGGKNKWIEQKLSLNDVHLTIKGYELMAKKLLEDLKNIIDY"
FT   gene            complement(600448..601458)
FT                   /locus_tag="C1336_000080039"
FT                   /note="C1336_000080039 identified by Glimmer3 with a raw
FT                   score of 9.83."
FT   CDS             complement(600448..601458)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080039"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000080039 identified by Glimmer3 with a raw
FT                   score of 9.83. Gene function extrapolated from C8J_0572
FT                   (CP000814.1) after blastn alignment (98.22 percent identity
FT                   over a 1011 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31278.1"
FT                   /translation="MSAVRFFFILIIVLGLVVVVMNQSISSYIEQKYHFAFYPHNDLLK
FT                   EANGFKIKLEQIRAILSNEPLPQTNEEDTNQESKSTDENLSKIDKVLNTLENDENTTHK
FT                   ETNLTLIQDANISFIDNTKLELQNGDEFLFIGDSLMQGVAIALNRDLRNLNLKVTDLSK
FT                   QNTGLSYKSYFNWSKATNEAFVKNSNIKYLVVLLGANDPWDIKKGGNYHRFGSPSWIDI
FT                   YTNRVDEIIKIAKKHKAKVFWFEIPPVKKEDLNKKIQVLNKIYSNEILKNKEIFINTKL
FT                   FFSVNDEYSAYIKDENNRSIKVRTDDGIHFTPSGAREMSKLLLEHIKLKEENASK"
FT   gene            complement(601459..602835)
FT                   /locus_tag="C1336_000080040"
FT                   /note="C1336_000080040 identified by Glimmer3 with a raw
FT                   score of 8.37."
FT   CDS             complement(601459..602835)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080040"
FT                   /product="alginate O-acetyltransferase AlgI"
FT                   /note="C1336_000080040 identified by Glimmer3 with a raw
FT                   score of 8.37. Gene function extrapolated from CJE0714
FT                   (CP000025.1) after blastn alignment (98.89 percent identity
FT                   over a 810 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31279.1"
FT                   /translation="MTYFSLEFSILMIAFFAIYWTFKNDYKIQNILILIFSYIIYILIN
FT                   PYFALVLFIYTFFIHYFALLIFVRRKRYIFAICMAFIILNLCFFKYFPSIKGSVDEILN
FT                   FFGLEFLNIDLVFPIGISFYTFTSITYLVEVYQKRRLESFLNLATFLSFFPTLLSGPIM
FT                   RSSFFFEQAYQKREFKHANLIIILLVFGIVKKVLIANYLGIYAKSILDFPQSYNFIQLL
FT                   SAIYAYAIQIYCDFSGYVDLVCAFALMLGFTLPSNFNMPYLAKNLKDFWTRWHISLSTF
FT                   IRDYIYIPLGGNRKGMPRTIVNILIAFILSGMWHGNTLAFIVWGLLHGIGIVFIHLLAL
FT                   SKFSLQKIPALGRFLTFQFVCFTWIFFYYSKNLEDAIEYFKACYYNFFQIPSYNDIYML
FT                   VAFGVLFMIYPLFINFKEYCIKILNLTPFLLKPFIIAFILLLVFAFMPDGIPDFIYSSF
FT                   "
FT   gene            complement(602879..603382)
FT                   /locus_tag="C1336_000080041"
FT                   /note="C1336_000080041 identified by Glimmer3 with a raw
FT                   score of 10.57."
FT   CDS             complement(602879..603382)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080041"
FT                   /product="nonheme iron-containing ferritin"
FT                   /note="C1336_000080041 identified by Glimmer3 with a raw
FT                   score of 10.57. Gene function extrapolated from
FT                   CJJ81176_0641 (CP000538.1) after blastn alignment (98.16
FT                   percent identity over a 490 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31280.1"
FT                   /translation="MLSKEVVKLLNEQINKEMYAANLYLSMSSWCYENSLDGAGAFLFA
FT                   HASEESDHAKKLITYLNETDSHVELQEVKQPEQNFRSLLDVFEKTYEHEQFITKSINTL
FT                   VEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKIKLIGEHGNGLYLADQYIKNIAL
FT                   NRKK"
FT   gene            complement(603474..603593)
FT                   /locus_tag="C1336_000080042"
FT                   /note="C1336_000080042 identified by Glimmer3 with a raw
FT                   score of 3.35."
FT   CDS             complement(603474..603593)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080042"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000080042 identified by Glimmer3 with a raw
FT                   score of 3.35. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31281.1"
FT                   /translation="MPHLKIEFFSFFLLNFKKSNGSLKKLGNILETFFILHFP"
FT   gene            603563..604558
FT                   /locus_tag="C1336_000080043"
FT                   /note="C1336_000080043 identified by Glimmer3 with a raw
FT                   score of 15.55."
FT   CDS             603563..604558
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080043"
FT                   /product="phosphate transport system substrate-binding
FT                   protein"
FT                   /note="C1336_000080043 identified by Glimmer3 with a raw
FT                   score of 15.55. Gene function extrapolated from C8J_0575
FT                   (CP000814.1) after blastn alignment (96.75 percent identity
FT                   over a 986 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31282.1"
FT                   /translation="MKKILSLSVASFALCGALNAADLKIAGSSTVYPFTSFVAEEYASI
FT                   KNTKTPIVESLGTGGGFKVFCEGTTDISNASRPMKLSEFETCKKAGVTDIVGIMIGYDG
FT                   IVLAQNKTNAPLNITKKELFLALAKEIPQNGKLIPNPYTNWNQINKNLPNRKISVYGPP
FT                   SSSGTRDTIEELVMSDVSKKIPEYKGEYKTLRQDGAYIPSGENDNLIVSKLTIDKDAFG
FT                   IFGYSFLVSNSDKINVATIDGVTPSEENIADEKYELARSLFIYINAKKNPKEAFDFAKI
FT                   YMSDDLAKSGGELEKIGLIPLSDDKLKASQKHIEDRKILNDELVKAGKVF"
FT   gene            604568..605482
FT                   /locus_tag="C1336_000080044"
FT                   /note="C1336_000080044 identified by Glimmer3 with a raw
FT                   score of 16.09."
FT   CDS             604568..605482
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080044"
FT                   /product="phosphate transport system permease protein"
FT                   /note="C1336_000080044 identified by Glimmer3 with a raw
FT                   score of 16.09. Gene function extrapolated from C8J_0576
FT                   (CP000814.1) after blastn alignment (97.81 percent identity
FT                   over a 915 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31283.1"
FT                   /translation="MLKEKIIKFALFLCAFVSVIVSFAIMLTILIEALKFFQKESVVTF
FT                   LFSSQWAADAAFMNADGTSKQGIFGALSLFWGTFYISLIAMLTALPLGVMCAIYLGVFA
FT                   GKKSKNYLKPILEIIAGIPTVVFGFFAAIVVAPFIVWFFSLFGIQASFQSALGAGFIMG
FT                   IMIVPIVASLSQDCIEAVSEKRINGAYALGMTKKEVVFAVILPEAIPGIVAACLLGLSR
FT                   ALGETMIVVMAASLRPNLTMNFLEDMTTVTVKIVEALSGDQAFDSSLALSAFSLGLVLF
FT                   IITLIINMFSVYLINRFHKRKNL"
FT   gene            605540..606568
FT                   /locus_tag="C1336_000080045"
FT                   /note="C1336_000080045 identified by Glimmer3 with a raw
FT                   score of 13.93."
FT   CDS             605540..606568
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080045"
FT                   /product="putative phosphate ABC transporter, permease
FT                   protein PstA"
FT                   /note="C1336_000080045 identified by Glimmer3 with a raw
FT                   score of 13.93. Gene function extrapolated from
FT                   JJD26997_1054 (CP000768.1) after blastn alignment (96.21
FT                   percent identity over a 1029 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31284.1"
FT                   /translation="MGLYINLIFLCIFLGSVGYLGIGAFKQTYIFVEANRNSPVYDLLS
FT                   RAEQRKIRTGQITEKSWLLANSEVDQYMKQKYNRLSEKQRALVDDLVQKGEIELKFNSN
FT                   FFLNGDSKSPENSGILSSVVGTLLVMLVCMVVSVPIGVAAAIYLEEFAPQNLFTHFIEV
FT                   CINNLASIPSILFGLLGLGVFINLFGMPRSSALVGGLTLAIMSLPIIIVSTKAALKSVD
FT                   INMKNAAYALGMTKVQMVKGIMLPLAMPMILTGSILTLAGAIGETAPLMIIGMIAFIPD
FT                   VASSIFDPTSVLPAQIYSWSAMPERAFLERTAAGIIVLLGLLVVLNLSAILLRKYFQGK
FT                   LK"
FT   gene            606565..607305
FT                   /locus_tag="C1336_000080046"
FT                   /note="C1336_000080046 identified by Glimmer3 with a raw
FT                   score of 16.17."
FT   CDS             606565..607305
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080046"
FT                   /product="phosphate ABC transporter, ATP-binding protein"
FT                   /note="C1336_000080046 identified by Glimmer3 with a raw
FT                   score of 16.17. Gene function extrapolated from C8J_0578
FT                   (CP000814.1) after blastn alignment (97.17 percent identity
FT                   over a 741 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31285.1"
FT                   /translation="MIAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFL
FT                   RCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVKSIYENISYAPK
FT                   LHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIKPKL
FT                   LLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEF
FT                   GESKEFFENPKQEKTKAYLSGAFG"
FT   gene            607345..608700
FT                   /locus_tag="C1336_000080047"
FT                   /note="C1336_000080047 identified by Glimmer3 with a raw
FT                   score of 13.89."
FT   CDS             607345..608700
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080047"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000080047 identified by Glimmer3 with a raw
FT                   score of 13.89. Gene function extrapolated from C8J_0579
FT                   (CP000814.1) after blastn alignment (97.06 percent identity
FT                   over a 136 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31286.1"
FT                   /translation="MLKFAFYLCKALIMAKKQLSLTRLSFPIFWDLLSKYLTVIINTAM
FT                   VSHYSNFLVGAMGAGNQILDLFITIFSFLSVGCSVVIAQAIGAKDHVLARKVIHQSLFL
FT                   NALLGFVCGALILWHGKYLLYLLKIPQELLKDSEIYLHMLAICLFFDAIGIVLAAIVRV
FT                   YNMAYWVMLIGFLMDIVVICGNYYVLHHTKSELFGVGLSNIFARIVAIVALLVILFYKL
FT                   KIHLKIKEMIKLEKEVLKKVLNIGGFSAGENLLWIVQYTIAFAFVASLGEASLSVQTIY
FT                   FQISMLIMLIGQATSIANEIIVGKLVGARYENIAYKHAWRALYFSVVASALVALLNYLC
FT                   QDFTMQILGLKEELKNLMIPLFALSIFLEISRTFNIVMVNSLRASGDAKFPFFSGLVFM
FT                   MGVSLPVGYVLCFHFNLGILGVWIGFCADEFLRGMVNSYRWKSKKWQGKALV"
FT   gene            608676..609323
FT                   /locus_tag="C1336_000080048"
FT                   /note="C1336_000080048 identified by Glimmer3 with a raw
FT                   score of 11.27."
FT   CDS             608676..609323
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080048"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000080048 identified by Glimmer3 with a raw
FT                   score of 11.27. Gene function extrapolated from CJE0723
FT                   (CP000025.1) after blastn alignment (98.45 percent identity
FT                   over a 194 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31287.1"
FT                   /translation="MARQSSSLKSFIYKDECYFYSKKRIKTLRLRLNERGEFVLSIPYF
FT                   CTFKSVYEFLDKSSSWMNEAKKRFEKKALKDDELIFLAKKYKIIFDENAKKTYFNKDKI
FT                   LCQNEAKLDLFLRQNAKKIFTFYLKKWSQKTGLFYTHLSIKNMKTRWGSCNHNKAYVNL
FT                   NLKLIQKSLRAIEYVILHEISHLKFPNHSKEFYAFMEHFMSDFRQREKEFLS"
FT   gene            609365..610885
FT                   /locus_tag="C1336_000080049"
FT                   /note="C1336_000080049 identified by Glimmer3 with a raw
FT                   score of 15.28."
FT   CDS             609365..610885
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080049"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000080049 identified by Glimmer3 with a raw
FT                   score of 15.28. Gene function extrapolated from Cj0621
FT                   (AL111168.1) after blastn alignment (96.97 percent identity
FT                   over a 1452 bp alignment). Similar to Cj0621."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31288.1"
FT                   /translation="MTLDFDFIYNADNDIFEYLLRFYAKNYNYTLSKEENIYHFSIDAD
FT                   EENLKTFCDSLNFMSHSVFLKKFDVKAGQDFNPCMPEDKEFSRFSYITHLNSNAYQEKK
FT                   LLNKNEWGVFCECEFSSNLSEFEKINEENFNTFLNLAFDLLSQEKKIYLKDKNGIYEFS
FT                   LFKNEFIGDFLLPCDIKAINSVFVCSNENLKLLASLEKPLMKLRLNAMFRKNHNLDFND
FT                   FKIRLARDLFCFALGLKLFENEYKFLSVKKIEEYQKDFYISALDEQVVVLEGFEFINVK
FT                   ARELIFSKEDKNMARISYLVSRYKEKAFILELSKDYEDILLINKELNLLKLCLPKHSKE
FT                   LYEEIKKDEIGARLLENFSKEFPLLDENFELQNNFYSLLGLVGRVLNLGKNLQESASEL
FT                   LKIADESKMPRGVKIDYRLKEDKSFNYTRTLRSTMSFMLAGVDSANIAYGAVESLAYFL
FT                   RDTYDELREKKQSDLALISGSLFEHKSLLKNTLKHLKNCQLSDVPLRI"
FT   gene            610866..613055
FT                   /locus_tag="C1336_000080050"
FT                   /note="C1336_000080050 identified by Glimmer3 with a raw
FT                   score of 15.57."
FT   CDS             610866..613055
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080050"
FT                   /product="[NiFe] hydrogenase maturation protein HypF"
FT                   /note="C1336_000080050 identified by Glimmer3 with a raw
FT                   score of 15.57. Gene function extrapolated from
FT                   CJJ81176_0651 (CP000538.1) after blastn alignment (99.12
FT                   percent identity over a 339 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31289.1"
FT                   /translation="MCHLGYKIKISGLVQGVGFRPLVYELALKSKLFGEVRNDGFGVEI
FT                   ILACTQKECENFIENLKNHLPPLARIDKLIITQISISNYENFSITPSLKNTKSTPMLSD
FT                   FALCKECKKEFFDEKNPRFLYPFITCTHCGPRFSIIKSLPYDRAHTSMQELLMCEFCKS
FT                   EYEDPKNRRFHAQPISCPKCKINVFLKNSKGEILAKDQEAFMQSSKFLKEGKILAIKGM
FT                   GGFHLMCDAFNEEALKTLRLRKNRPKKPFALMCKDLQSAKELAFIDEKEESLLGGVLAP
FT                   IVILKAKKAFSLIAPDVDKIGIMLAYTPLHLLLFEYFKGSLVATSANLSGESIIKDEFN
FT                   LCQKLDKVFDFYLDYDREIINASDDSIAQVVNGKTMFLRTSRGLNPFYLERNFNKKGTF
FT                   LALGAELKNEFVIFYENKLLISPYIGDLKSLDVHERFFKLLEFFKQNYDLKFDAILCDK
FT                   HPHFSYAKEFEERIKISHHYAHFCAAYFEYEENFAKDEKALAFICDGTGYGEDGKIWGG
FT                   EVFVGNLKEYERIAHFENFTLINSDIKNIQNLALSLIFHYDLEDKAKEFLAKIPKIKLE
FT                   NLKKIYSHSNLQTSSLGRIIDAFGSIVFNLEKSSYEAQVGLMCEAFYDKNLDFSYKLFV
FT                   EKGQVNFKNLILGALQDEKTKAITGMFNALANFIIDFSKDYDLKVLLSGGVFQNKTLLE
FT                   ILKAKNFDFFVPLKYPCNDSSIALGQMVHFLNLEK"
FT   gene            613133..613876
FT                   /locus_tag="C1336_000080051"
FT                   /note="C1336_000080051 identified by Glimmer3 with a raw
FT                   score of 14.71."
FT   CDS             613133..613876
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080051"
FT                   /product="hydrogenase accessory protein HypB"
FT                   /note="C1336_000080051 identified by Glimmer3 with a raw
FT                   score of 14.71. Gene function extrapolated from
FT                   CJJ81176_0652 (CP000538.1) after blastn alignment (96.37
FT                   percent identity over a 744 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31290.1"
FT                   /translation="MCKDCGCSINSSHTHDHHHDHYHENPSLKESKTIEVISKILSKND
FT                   EEAKHNRAHFNEANTLCINLMSSPGSGKTTLLESTIKALKNELKIAVIEGDLETNNDAL
FT                   RVKNAGALAYQITTGQSCHLDAFMVHEALHHLAIDDVDLLFIENVGNLVCPASYDLGEH
FT                   LNVVLLSVTEGSDKPQKYPVMFKKADIVLITKADLAHHFDFDVKEATRLIKELNPRADI
FT                   ITLDAKNGTNMELWYKVLKLKKELF"
FT   gene            613876..614157
FT                   /locus_tag="C1336_000080052"
FT                   /note="C1336_000080052 identified by Glimmer3 with a raw
FT                   score of 10.82."
FT   CDS             613876..614157
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080052"
FT                   /product="hydrogenase isoenzymes formation protein"
FT                   /note="C1336_000080052 identified by Glimmer3 with a raw
FT                   score of 10.82. Gene function extrapolated from C8J_0584
FT                   (CP000814.1) after blastn alignment (97.52 percent identity
FT                   over a 282 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31291.1"
FT                   /translation="MCLSIPSEILEIDELNNALVQTLGVKRKVNLDLIDEPLKQGDYVL
FT                   IHVGVAMEKIDKEAALESIKTYQEIVEKMNSGEIKSDEGDLGLNEFHR"
FT   gene            614141..615232
FT                   /locus_tag="C1336_000080053"
FT                   /note="C1336_000080053 identified by Glimmer3 with a raw
FT                   score of 14.71."
FT   CDS             614141..615232
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080053"
FT                   /product="hydrogenase expression/formation protein HypD"
FT                   /note="C1336_000080053 identified by Glimmer3 with a raw
FT                   score of 14.71. Gene function extrapolated from
FT                   CJJ81176_0654 (CP000538.1) after blastn alignment (97.25
FT                   percent identity over a 1092 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31292.1"
FT                   /translation="MNFIDEFRDKESILALKKLIEQELKNPINIMEICGGHTHSIMKYA
FT                   LPSILPKEINFIHGPGCPVCVMPRVRIDTAIKLASMKDTIFCTLGDLLRVPGSEISLLD
FT                   LRAKGADVRALYSPLEVLEIAKQKLNKNIIFFAIGFETTTPMSALLLQKVIEEKINNVF
FT                   FHINHITVPAPVEAIMNDENVKINAFLGPSHVSVITGYGIYEPLAAKFKTPIAVSGFEP
FT                   VDILESVLNIIKQSNEGTFKVYNQYKRAVSKEGNVKAQNLVKKYFRVCDFEFRGLGLIK
FT                   DGGLELKEEFSAYDASKKFDCAVQSKNESKACICGQILRGLAKPYDCKVFGKACTPRSP
FT                   IGSCMVSGEGACAAYYKYSKVNA"
FT   gene            615229..616203
FT                   /locus_tag="C1336_000080054"
FT                   /note="C1336_000080054 identified by Glimmer3 with a raw
FT                   score of 18.78."
FT   CDS             615229..616203
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080054"
FT                   /product="hydrogenase isoenzymes formation protein"
FT                   /note="C1336_000080054 identified by Glimmer3 with a raw
FT                   score of 18.78. Gene function extrapolated from Cj0626
FT                   (AL111168.1) after blastn alignment (98.85 percent identity
FT                   over a 520 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31293.1"
FT                   /translation="MKNISLAHGGGGEEMNELLTKLFKIFDNEILNANNDAAILGNLAL
FT                   STDSFVLSPIFLDEEVNIGKLCACGSINDVLMVGAKPKYLSLGLILEEGFELEKLERIL
FT                   KSIKEECEKCGVMLVCGDTKVVPKGKADEIYINTTALGEIISKKESKNIKAGLSILLSG
FT                   DIGRHGASVLIKRNELEADIKSDCKALNKEVLELLEKDIKVVAMRDATRGGLSAVLNEW
FT                   AKQSGNDLLIFEEKIIVQDEVLGLCELFGYEAYELANEGTFILCVEKEDELKALEILKK
FT                   YNVNASIIGEVLEEKKARVILQNAYGAKRFLESPKGELLPRIC"
FT   gene            616203..616547
FT                   /locus_tag="C1336_000080055"
FT                   /note="C1336_000080055 identified by Glimmer3 with a raw
FT                   score of 9.93."
FT   CDS             616203..616547
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080055"
FT                   /product="hydrogenase expression/formation protein"
FT                   /note="C1336_000080055 identified by Glimmer3 with a raw
FT                   score of 9.93. Gene function extrapolated from Cj0627
FT                   (AL111168.1) after blastn alignment (98.84 percent identity
FT                   over a 345 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31294.1"
FT                   /translation="MHELSIVESLIELCEENALNNKACNVQEIYVKIGRLSGIEVDLFK
FT                   RCFETFKENSNICKNAKLFIELAPLEILCLKCDQTSILEENVFKCPKCQSIEYKIIQGE
FT                   DLHLMRLVMK"
FT   gene            complement(616575..616703)
FT                   /locus_tag="C1336_000080056"
FT                   /note="C1336_000080056 identified by Glimmer3 with a raw
FT                   score of 7.00."
FT   CDS             complement(616575..616703)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000080056"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000080056 identified by Glimmer3 with a raw
FT                   score of 7.00. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31295.1"
FT                   /translation="MKCCKYFCIYKFLFKIIIFGFYILDKNLKFLILYFLDILSIG"
FT   gap             616891..617790
FT                   /estimated_length=900
FT   gene            complement(617837..617968)
FT                   /locus_tag="C1336_000090000"
FT                   /note="C1336_000090000 identified by Glimmer3 with a raw
FT                   score of 13.31."
FT   CDS             complement(617837..617968)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000090000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000090000 identified by Glimmer3 with a raw
FT                   score of 13.31. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31238.1"
FT                   /translation="MILSLLPILPRVPPASIIMVCGPESEMLICTVSEVFIVVLTLA"
FT   gene            complement(617975..618088)
FT                   /locus_tag="C1336_000090001"
FT                   /note="C1336_000090001 identified by Glimmer3 with a raw
FT                   score of 2.58."
FT   CDS             complement(617975..618088)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000090001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000090001 identified by Glimmer3 with a raw
FT                   score of 2.58. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31239.1"
FT                   /translation="MTVMVPLKSLSCSTFTLPLIVPLLVRLVRVRVLLPLA"
FT   gap             618242..621086
FT                   /estimated_length=2845
FT   gene            complement(621098..622063)
FT                   /locus_tag="C1336_000100000"
FT                   /note="C1336_000100000 identified by Glimmer3 with a raw
FT                   score of 14.55."
FT   CDS             complement(621098..622063)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100000"
FT                   /product="putative DNA polymerase III, delta subunit"
FT                   /note="C1336_000100000 identified by Glimmer3 with a raw
FT                   score of 14.55. Gene function extrapolated from Cj0630c
FT                   (AL111168.1) after blastn alignment (97.72 percent identity
FT                   over a 307 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31146.1"
FT                   /translation="MYRKELQTLLSKDSMPNFFFLYGADNFQSELYAEFIKEKYKPDET
FT                   LKLFFEEYNFTHASDFLSTGSLFSEKKLLEIKTSKKIPIKDLKILVELCKNNANNFFLL
FT                   ELYDESSKQSDIEKIFSPHFVRFFKANGAKEGVELLSIKAKQLRVEITQNALFTLFTSF
FT                   DENLYLAASELNKFSGLRVDEKTIEQYCYSLNTGSFESFFEKILKKQDFKSELEKILDN
FT                   FNEIALINSLYNSFYRLFKIALYAKINGKIDFKELLGYTPPPQVGQNLSSQAFSLKIEQ
FT                   YKEIFTLLLKSEYELKTNSKLVKKEFLISNLLKLARILKS"
FT   gene            complement(622056..623991)
FT                   /locus_tag="C1336_000100099"
FT                   /note="Features C1336_000100001, C1336_000100002 joined to
FT                   form C1336_000100099 to correct 454 sequencing error
FT                   (C1336_000100001 identified by Glimmer3 with a raw score of
FT                   12.94, C1336_000100002 identified by Glimmer3 with a raw
FT                   score of 13.90)."
FT   CDS             complement(join(622056..622256,622258..623991))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100099"
FT                   /product="RNB-like protein"
FT                   /note="Features C1336_000100001, C1336_000100002 joined to
FT                   form C1336_000100099 to correct 454 sequencing error
FT                   (C1336_000100001 identified by Glimmer3 with a raw score of
FT                   12.94, C1336_000100002 identified by Glimmer3 with a raw
FT                   score of 13.90). Gene function extrapolated from
FT                   CJJ81176_0659 (CP000538.1) after blastn alignment (97.98
FT                   percent identity over a 1935 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31147.1"
FT                   /translation="MKEFLNSLSYGISSHEVSNEFKQILRELLANHIIKEHKNKYYLNN
FT                   GFAFGVLDISSKGTGFLQCFDESFKKDLLIENKNLKGANYKDIVAVKLLPLKKKRPSAK
FT                   VILVLKRANETSLVITKRYGEAVLGMNIKTGLSTALKASQKSLKALPLGTILKIENENN
FT                   NIIEVLGHIDDESVDEKISLALFNKNNEFSDACIKEALANGDSVDASMYENRMDLRALP
FT                   FCTIDPIHAKDFDDAIYFDTQKREIYVAIADVSEYVYAYSAIDKEARNRGFSIYFPHIA
FT                   IPMLPHPLSENICSLKPHLDRLAYCFKITLNHENKVIKEELFEGIINSKRRFNYDEVDE
FT                   ILVQKPDLKELSWLYELFEITKNLRKMRLKNAFEFRTEELRMNLDENLSLKSTVFEKDT
FT                   PSHNLIEDCMLLANKAAAKLIDIGVFRNHLSADARKIDKLLNELRELGIDVNFKPNLPE
FT                   LIRDIQALADELNLRAEVDKLIIKAQKKAEYSSVNAGHFGLGFDKYSHFTSPIRRYSDL
FT                   ILHRLLKAKQKNDEKLFNYLLLNIESTCESLSTLEREADKVAFDFMDRKFARWAAKNIG
FT                   KKFKALVVQNDGVCIAKLDDEIKGADIILYDTRVNLLESVEVQIMEADIVMAKIYAKIT
FT                   QRLIKEENV"
FT                   /artificial_location="low-quality sequence region"
FT   gene            624110..625132
FT                   /locus_tag="C1336_000100003"
FT                   /note="C1336_000100003 identified by Glimmer3 with a raw
FT                   score of 16.01."
FT   CDS             624110..625132
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100003"
FT                   /product="ketol-acid reductoisomerase"
FT                   /note="C1336_000100003 identified by Glimmer3 with a raw
FT                   score of 16.01. Gene function extrapolated from
FT                   CJJ81176_0660 (CP000538.1) after blastn alignment (97.45
FT                   percent identity over a 1019 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31148.1"
FT                   /translation="MAITVYYDKDCDLNLIKSKKVAIIGFGSQGHAHAMNLRDNGVNVI
FT                   IGLREGSVSAVKAKNAGFEVMSVSEASKTADMIMILAPDEIQADIFNVEIKPNLSEGKA
FT                   IAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESKNAK
FT                   NLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEAGYEP
FT                   EMAYFECLHEMKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIITEETKKAMKGVLK
FT                   DIQNGVFAKDFILERRAGFARMHAERKNMNDSLIEKTGRNLRAMMPWISAKKLVDKDKN
FT                   "
FT   gene            625136..626219
FT                   /locus_tag="C1336_000100100"
FT                   /note="Features C1336_000100004, C1336_000100005 joined to
FT                   form C1336_000100100 to correct 454 sequencing error
FT                   (C1336_000100004 identified by Glimmer3 with a raw score of
FT                   13.46, C1336_000100005 identified by Glimmer3 with a raw
FT                   score of 11.15)."
FT   CDS             join(625136..625810,625812..626219)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100100"
FT                   /product="hypothetical protein"
FT                   /note="Features C1336_000100004, C1336_000100005 joined to
FT                   form C1336_000100100 to correct 454 sequencing error
FT                   (C1336_000100004 identified by Glimmer3 with a raw score of
FT                   13.46, C1336_000100005 identified by Glimmer3 with a raw
FT                   score of 11.15). Gene function extrapolated from
FT                   CJJ81176_0661 (CP000538.1) after blastn alignment (98.43
FT                   percent identity over a 1083 bp alignment) - for clarity,
FT                   the original product name 'conserved domain protein' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31149.1"
FT                   /translation="MSKKKLVQIQRYLIIAILFLLCIALALGILVKYQNSQDVSSVKPD
FT                   YFVDKQEDLISLNKDHYEIGIFQENEFDNNKSVSILEQKIQEIDDLNTSLNEQNLSSVE
FT                   QNLSLEQNQSLEQNFIPKDTNLTQDQNLTFDEDIHLNKISKKPKLAIIIDDMANASQVR
FT                   GLKALNLKLNPSFFPPDKNHNETPKLALKFDFYMVHLPLAAINYNKPELDTLNPNDSKE
FT                   RIFKKIKQIKKDFKDLRYINNHTGSLFTSNEEAMRKLYEALKNQNIFFVDSKTIGNSKA
FT                   NKIAKELSMPYIQRDVFLDNEDDVNYVKKQLQSAVKLAQKKGFVIAIGHPRKNTFKALE
FT                   QSKDLLKGVDLVYLSEIYGK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            626209..626982
FT                   /locus_tag="C1336_000100006"
FT                   /note="C1336_000100006 identified by Glimmer3 with a raw
FT                   score of 16.34."
FT   CDS             626209..626982
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100006"
FT                   /product="DNA processing protein A"
FT                   /note="C1336_000100006 identified by Glimmer3 with a raw
FT                   score of 16.34. Gene function extrapolated from
FT                   CJJ81176_0662 (CP000538.1) after blastn alignment (96.38
FT                   percent identity over a 774 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31150.1"
FT                   /translation="MASEILPDEFLKLFKDLKKPPKKLHYKGNLSLLRQDKIAIIGSRR
FT                   MSVYTKNCVFSLASMLKNTHLCVVSGGALGVDITASMAAMPNTIGIFANGLEQIYPRTN
FT                   EKIIKQIYENALALSEYEDDYLPKNYDFLLRNRLVIALSKAVVVAQADIKSGSMQSARL
FT                   ALELNKPLYVLPQRLGESTGTNLLLKENKAKLICDFKEFVSEFASIDINQDEFLEFCKK
FT                   GVSVDEALKIYGQKVYEYELEGKISIEGLFIRVLV"
FT   gene            626979..627362
FT                   /locus_tag="C1336_000100007"
FT                   /note="C1336_000100007 identified by Glimmer3 with a raw
FT                   score of 15.94."
FT   CDS             626979..627362
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100007"
FT                   /product="putative holliday junction resolvase"
FT                   /note="C1336_000100007 identified by Glimmer3 with a raw
FT                   score of 15.94. Gene function extrapolated from Cj0635
FT                   (AL111168.1) after blastn alignment (98.18 percent identity
FT                   over a 384 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31151.1"
FT                   /translation="MRALALDVGLKRIGVALCVDKKIALPLDAVLRKNRNQAANEIKNL
FT                   LKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLEFDKEICFVDESGTSKEALGYGVAN
FT                   TRKKDGKLDSLAAFIMIKDYFAL"
FT   gene            627352..628230
FT                   /locus_tag="C1336_000100008"
FT                   /note="C1336_000100008 identified by Glimmer3 with a raw
FT                   score of 14.69."
FT   CDS             627352..628230
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100008"
FT                   /product="NOL1/NOP2/sun family protein"
FT                   /note="C1336_000100008 identified by Glimmer3 with a raw
FT                   score of 14.69. Gene function extrapolated from C8J_0595
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 70 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31152.1"
FT                   /translation="MLSRIEKLYTKDEMQNILSSFTQEKNVCVFVNTLKISTEELEKEF
FT                   LKQNLKFKKINAYCYLFDAKDKAILSSMKVFNEAYFYIQNYSSYLCALNLEVKAGQSVL
FT                   DMCAAPGGKSINLANFMQNTGYLACNEMSRDRFFILQKNLKNYGVNAKVFMKDGKNIGN
FT                   LCPLKFDKILLDAPCSTFAKIGFDLEKSYKEIKNIAKTQKKLLHSALKALKIGGELIYS
FT                   TCTFTKEENEEVIENALKSEFKLELLDIDLENVEAKVGQSEEFAEISKCRRILPSLDYD
FT                   GFFIAKLRKLC"
FT   gene            complement(628406..628903)
FT                   /locus_tag="C1336_000100009"
FT                   /note="C1336_000100009 identified by Glimmer3 with a raw
FT                   score of 9.35."
FT   CDS             complement(628406..628903)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100009"
FT                   /product="peptide methionine sulfoxide reductase"
FT                   /note="C1336_000100009 identified by Glimmer3 with a raw
FT                   score of 9.35. Gene function extrapolated from
FT                   CJJ81176_0665 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 498 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31153.1"
FT                   /translation="MKNIVLGGGCFWCVEAVFERLKGVIDTEVGYSGGNPNPSYESVCN
FT                   GDGNIEVVKINYDEKQISLLEILTLFFKIHDPTSIDKQGGDIGIQYRSIIFYENEEDKI
FT                   LAQNFIEEQQKIFSKKIVTKISRLQTYYKAENYHQHYFINNPNQGYCQAVIAPKLQKIQ
FT                   SD"
FT   gene            complement(628944..629462)
FT                   /locus_tag="C1336_000100010"
FT                   /note="C1336_000100010 identified by Glimmer3 with a raw
FT                   score of 16.33."
FT   CDS             complement(628944..629462)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100010"
FT                   /product="inorganic pyrophosphatase"
FT                   /note="C1336_000100010 identified by Glimmer3 with a raw
FT                   score of 16.33. Gene function extrapolated from C8J_0597
FT                   (CP000814.1) after blastn alignment (98.27 percent identity
FT                   over a 519 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31154.1"
FT                   /translation="MDLSKIKIGDIPNKINAVIEIPYGSSIKYEIDKDSGAIMVDRVMA
FT                   SAMFYPANYGFIANTLADDGDPVDILVLNEYPIQAGAVIPCRLIGVLIMEDESGMDEKL
FT                   LAVPNSKIDARYDNIKTYTDLPQATLNKIKNFFETYKILEPNKWVKVQDFKDEKAAIEI
FT                   LEKAIKNYK"
FT   gene            complement(629472..630050)
FT                   /locus_tag="C1336_000100011"
FT                   /note="C1336_000100011 identified by Glimmer3 with a raw
FT                   score of 15.21."
FT   CDS             complement(629472..630050)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100011"
FT                   /product="adenylate kinase"
FT                   /note="C1336_000100011 identified by Glimmer3 with a raw
FT                   score of 15.21. Gene function extrapolated from
FT                   CJJ81176_0667 (CP000538.1) after blastn alignment (98.57
FT                   percent identity over a 558 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31155.1"
FT                   /translation="MKELFLIIGAPGSGKTTDASLIAQADATNITHYSTGDLLRAEVAS
FT                   GSELGKTIDSFISKGNLVPLDVVVNTIVCALKAAPTKTIIIDGYPRSVEQMMEFDKVLS
FT                   EQNEICLKGVIEVRVSEEVAKERVLGRNRGADDNEEVFYNRMKVYTEPLNEILDFYQKK
FT                   KLHFIIDGERTIEPIVADMKELIKKIQSI"
FT   gene            complement(630047..631775)
FT                   /locus_tag="C1336_000100101"
FT                   /note="Features C1336_000100012, C1336_000100013 joined to
FT                   form C1336_000100101 to correct 454 sequencing error
FT                   (C1336_000100012 identified by Glimmer3 with a raw score of
FT                   5.75, C1336_000100013 identified by Glimmer3 with a raw
FT                   score of 10.83)."
FT   CDS             complement(join(630047..630436,630438..631775))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100101"
FT                   /product="aspartyl-tRNA synthetase"
FT                   /note="Features C1336_000100012, C1336_000100013 joined to
FT                   form C1336_000100101 to correct 454 sequencing error
FT                   (C1336_000100012 identified by Glimmer3 with a raw score of
FT                   5.75, C1336_000100013 identified by Glimmer3 with a raw
FT                   score of 10.83). Gene function extrapolated from C8J_0599
FT                   (CP000814.1) after blastn alignment (98.09 percent identity
FT                   over a 1728 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31156.1"
FT                   /translation="MGISHVGQSVKLCGWVNSYRDHGGVIFIDLRDRSGIIQLVCDPND
FT                   SKEAHEIASNARNEFVLIAEGAIRPRGEGLVNPKLKTGEIEVVVSKLTIENESAVPPFA
FT                   IADESVNEELRLKYRFLDLRNPKLYENFALRSKACIAARNSLANMGFLEVETPILTKAT
FT                   PEGARDYLVPSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPE
FT                   FTQIDVEMSFCEQKDVINVAETFLKDIFKACGKEIQTPFRQMQYKDAMENYGSDKPDLR
FT                   FDLKFIDVIDIFAKSNNEIFANIAKDTKKNRIKAIRVPKGDTIFSKRQMQRFEEFVRKF
FT                   GAQGLAFIQVKEDGLKGPLCKFFSEEDLNELSKRCELEVGDVVFFGAGAKKTVLDYMGR
FT                   FRIFLANELNLIDPNALEFLWVVDFPMFEQNDDGSYSAMHHPFTMPKNINEADLEEISS
FT                   IAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLNINEEQQKEKFGFLLDALSFGAPPHGG
FT                   IAIGLDRLIMLVTGANSIREVIAFPKTQRAQCLMTDAPSPANNEAMRELGIKLRENIK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            631890..632751
FT                   /locus_tag="C1336_000100102"
FT                   /note="Features C1336_000100014, C1336_000100015 joined to
FT                   form C1336_000100102 to correct 454 sequencing error
FT                   (C1336_000100014 identified by Glimmer3 with a raw score of
FT                   7.93, C1336_000100015 identified by Glimmer3 with a raw
FT                   score of 12.48)."
FT   CDS             join(631890..632237,632239..632751)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100102"
FT                   /product="putative inorganic polyphosphate/ATP-NAD kinase"
FT                   /note="Features C1336_000100014, C1336_000100015 joined to
FT                   form C1336_000100102 to correct 454 sequencing error
FT                   (C1336_000100014 identified by Glimmer3 with a raw score of
FT                   7.93, C1336_000100015 identified by Glimmer3 with a raw
FT                   score of 12.48). Gene function extrapolated from Cj0641
FT                   (AL111168.1) after blastn alignment (99.33 percent identity
FT                   over a 297 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31157.1"
FT                   /translation="MQNKIDHKNIKKIGLVTRPNVSLDKEILKLQSILSIYKVELVLFK
FT                   ESSEILDLPKYGLDDLFKISDFVISLGGDGTLISLCRKACEYDKAVLGIHAGHLGFLTD
FT                   FKVDEAENFFQAFFQGEFRIEKPYLLSVFLEDKQGKILEKLAFNDVVISKNNQASMAHI
FT                   EVFRKEKKFNEYFGDGLIVATPAGSTAYNLSANGPIVYTLAQAFILTPVCSHSLTQRPI
FT                   VLPKGFEIEIMAKDCILCIDGQENYKMNNFKSIKVGLSDKNVALIHPKNRDYFQILKEK
FT                   LHWGN"
FT                   /artificial_location="low-quality sequence region"
FT   gene            632751..634274
FT                   /locus_tag="C1336_000100016"
FT                   /note="C1336_000100016 identified by Glimmer3 with a raw
FT                   score of 17.44."
FT   CDS             632751..634274
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100016"
FT                   /product="putative DNA repair protein"
FT                   /note="C1336_000100016 identified by Glimmer3 with a raw
FT                   score of 17.44. Gene function extrapolated from C8J_0601
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 76 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31158.1"
FT                   /translation="MINRIFMKENLGFKKAELEISKGLTVFTGLSGAGKSVLFKGILSA
FT                   FSLSESEAKIVEIELDDKLDLESFGIESEEENVFKLLKEKNTKYFINNQSIAKKSLQNL
FT                   SKTFIKYLSAKENNEFGNEKFLNLLDALEMQENTNFVSFLEDFKKDFNAYSQISNELNA
FT                   ILEEEKKVEELKELARVQIEKISSINPKIGEYEELLILKKKLSKKDKLEEAWSKAERIF
FT                   ELEKVVIEALNLSEVDASFFSECLNELRVICENQKMEDLDFDVETLLDRIENLSYLIKR
FT                   YESIENALEVLKQKKHELEHYENLSFEKKELEKKFQESKQKLEEKAQILTQTRKKNLKK
FT                   LEKCLNNYLKELYMKDASLTLKESGKISILGKDEIMLDINLAHLKNLSSGELNRLRLAF
FT                   IATECKILNAGKGILFLDEIDANLSGKEAMSIAKVLEELSKFYQIFAISHLPQLSSKAH
FT                   NHFLVEKNGEESKVKKLDQKERIKELARMVSGELVSDEAIEFAKTLFKN"
FT   gene            634378..635622
FT                   /locus_tag="C1336_000100017"
FT                   /note="C1336_000100017 identified by Glimmer3 with a raw
FT                   score of 12.87."
FT   CDS             634378..635622
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100017"
FT                   /product="response regulator/GGDEF domain protein"
FT                   /note="C1336_000100017 identified by Glimmer3 with a raw
FT                   score of 12.87. Gene function extrapolated from
FT                   CJJ81176_0671 (CP000538.1) after blastn alignment (98.07
FT                   percent identity over a 1245 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31159.1"
FT                   /translation="MNKKILIIDDNKMLGKLLAKKIQMTLDYEVDIAFGFAEAKELMNN
FT                   NYFLAFVDLCLPDAPNGEVVDYVIEKKIPAIVLTASGDKATKEKFMDKDILDYIFKESE
FT                   TCIDEIISSIIKLNQYAKTKVILAMSKLPERNEIKKILTQRQFNVLAAAHGEEAMSYLN
FT                   DNNDVKLIIADINMPVISGFELLTQVRERFSDDELGVILLGDHNDSFEANSFKNGVNEY
FT                   LFKPLSKESFNCRLDRCLSYMDDKKFLSTYNVLDPVSGVKNYNALIDGIDDYFNEIATK
FT                   DEEFAFAFLDIDNLQMINDEYGREVGDEVIKICANEIVNETKGRDLVGRYSAEKICILL
FT                   KNISQERAIKIFSRIRVNIKKAGVLVNLDEIFFTASIGVVFGKSGDKIDSLVDKASKIL
FT                   SQAKDNGKDRVEVCS"
FT   gene            635613..636428
FT                   /locus_tag="C1336_000100018"
FT                   /note="C1336_000100018 identified by Glimmer3 with a raw
FT                   score of 13.57."
FT   CDS             635613..636428
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100018"
FT                   /product="hydrolase, TatD family"
FT                   /note="C1336_000100018 identified by Glimmer3 with a raw
FT                   score of 13.57. Gene function extrapolated from CJE0747
FT                   (CP000025.1) after blastn alignment (99.43 percent identity
FT                   over a 349 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31160.1"
FT                   /translation="MFLNLDFQDGLRIVDTHCHLDSEAFKDDLDETLNRAFKNGIEKII
FT                   IPGADIKDLPYAATIAHKYKNIFFAAGVHPYEIDNYDEKILRQYLCDEKCVAVGECGLD
FT                   YFRFKSDLAEEIQKEKENQKKIFIAQLELAIEFKKPVIIHSREANHDTYEILHGYSKDL
FT                   VGGVLHCFNASEHLLTLFEDGFYFGIGGVLTFKNAKKLVEILPKIPKDRLLLETDAPYL
FT                   TPEPYRGKRNEPLLTQFVANKMCEVLKLSRKELLEICFNNSEKLFFKGY"
FT   gene            636428..637546
FT                   /locus_tag="C1336_000100019"
FT                   /note="C1336_000100019 identified by Glimmer3 with a raw
FT                   score of 7.88."
FT   CDS             636428..637546
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100019"
FT                   /product="putative secreted transglycosylase"
FT                   /note="C1336_000100019 identified by Glimmer3 with a raw
FT                   score of 7.88. Gene function extrapolated from Cj0645
FT                   (AL111168.1) after blastn alignment (98.69 percent identity
FT                   over a 1068 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31161.1"
FT                   /translation="MKKILLCFLICFNFLFAQINTPEFYERQMNVLRNLDINPSFISDL
FT                   IFVQTQQDIKSKHAQTLIDSMQNFSKVTPMIRKILAQQEVPDEILYLAMVESGLKTHSV
FT                   SNAKAVGVWQFMQPTARNLGLRIDAYVDERRDPVKSTYAATNYLKELKEEFGKWYLALL
FT                   AYNCGNGKLRQAIKQAGSDDLSVLLNPDKKYLSLETRNFIRKILTLAFLANDRDFLLDK
FT                   DASLMNYALSNEFAKVDVPSSASLKEIAKNLNMDLPTFKKYNPQFKHNFTPPGKGYYMY
FT                   IPLNKVAFFDKNFKAEKLAKVDTTIPMTRIYTVKSGDSLYKIAKNYNISVDEIREFNKI
FT                   AKNHLSINQKLIIPIKENKNANKNNYTKVVSR"
FT   gene            637533..638336
FT                   /locus_tag="C1336_000100020"
FT                   /note="C1336_000100020 identified by Glimmer3 with a raw
FT                   score of 7.31."
FT   CDS             637533..638336
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100020"
FT                   /product="putative lipoprotein"
FT                   /note="C1336_000100020 identified by Glimmer3 with a raw
FT                   score of 7.31. Gene function extrapolated from Cj0646
FT                   (AL111168.1) after blastn alignment (99.13 percent identity
FT                   over a 804 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31162.1"
FT                   /translation="MSAVSLGALFFSGCLGTSFFSSLDNAQVYYPSNDFKSSPSSSSGT
FT                   KGTMKPYTINGKTYYPTVVAVGETADGIASWYGPGFHGKKTSNGETYNQNALTAAHKTL
FT                   PMNTILKVTNLNNNRQVTVRVNDRGPFVNNRIIDLSKGAASQIDMIASGTAPVRLEVIG
FT                   FGSSNSGNNIVHSNVNYGNSGEIANNGQIYEGGNFMVQIGAFKNPAGAQTIAARYKTYR
FT                   TYSSTIRTSSVDGLNRVFLTGFRSEDEARDFAASGAFAGAFVVRE"
FT   gene            638342..638830
FT                   /locus_tag="C1336_000100021"
FT                   /note="C1336_000100021 identified by Glimmer3 with a raw
FT                   score of 15.97."
FT   CDS             638342..638830
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100021"
FT                   /product="phosphatase, YrbI family"
FT                   /note="C1336_000100021 identified by Glimmer3 with a raw
FT                   score of 15.97. Gene function extrapolated from C8J_0606
FT                   (CP000814.1) after blastn alignment (99.79 percent identity
FT                   over a 469 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31163.1"
FT                   /translation="MTELIFLDVDGCLTDGKIIYTSNGEFIKEFDVKDGAAIEAWLKLG
FT                   KKIAIITGRNCPCVEKRAKDLKIEILYQGIKDKLACAKEILQKLNLDFSQCAAIGDYFN
FT                   DKALLESVGLSFKPKDGHKDLNVDIVLSKKGGKAAIAQMIEILVEKNHLEEEWNKLWL"
FT   gene            638821..639336
FT                   /locus_tag="C1336_000100022"
FT                   /note="C1336_000100022 identified by Glimmer3 with a raw
FT                   score of 10.09."
FT   CDS             638821..639336
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100022"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100022 identified by Glimmer3 with a raw
FT                   score of 10.09. Gene function extrapolated from C8J_0607
FT                   (CP000814.1) after blastn alignment (97.56 percent identity
FT                   over a 451 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31164.1"
FT                   /translation="MAIKIFGILIALFTITFTILSLQDPYSLNLQTNALNFKNIEAKNL
FT                   KAYESNASTIKAYYKANSWVRYADRDEFNDFITLNLDFNLSANRLEFFNKDMSKVLFEG
FT                   NVTYIGTNNVKIISQEVEYQPKDKILYTNTDFKALINGSIINGNTLNYDVKNKILNIQG
FT                   VNAWLQDK"
FT   gene            639342..639779
FT                   /locus_tag="C1336_000100023"
FT                   /note="C1336_000100023 identified by Glimmer3 with a raw
FT                   score of 11.49."
FT   CDS             639342..639779
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100023"
FT                   /product="putative OstA family protein"
FT                   /note="C1336_000100023 identified by Glimmer3 with a raw
FT                   score of 11.49. Gene function extrapolated from Cj0649
FT                   (AL111168.1) after blastn alignment (98.17 percent identity
FT                   over a 438 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31165.1"
FT                   /translation="MLAYASVTWATQIEVKALNFYSDENKGESILSGNVEVIRGDDILN
FT                   SEKLIIYTDKNRKPIRYEAMQNATFKIVLKGKTYKGSGDKFIYNVIKDTYEINGHAYIN
FT                   ELGSNQKLFGDKIIVDRKANIYRVESKDQKPARFVFDLKDK"
FT   gene            639776..640372
FT                   /locus_tag="C1336_000100024"
FT                   /note="C1336_000100024 identified by Glimmer3 with a raw
FT                   score of 10.11."
FT   CDS             639776..640372
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100024"
FT                   /product="GTP-binding protein"
FT                   /note="C1336_000100024 identified by Glimmer3 with a raw
FT                   score of 10.11. Gene function extrapolated from CJE0753
FT                   (CP000025.1) after blastn alignment (98.88 percent identity
FT                   over a 89 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31166.1"
FT                   /translation="MIISAKFITSLVKFDEKLSSNFSEVAFLGRSNVGKSSLINSLCKQ
FT                   KNLAKSSATPGKTQLINFFEVTCKRNEEKFNINFIDLPGFGYAKVSKNLKAIWNQNLDE
FT                   FLKLRTSIKLFIHLIDSRHTHLEIDANLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAK
FT                   LKNKFKDSILVSNLNKIGLDSLEDIIINQTLGLDK"
FT   gene            640550..640864
FT                   /locus_tag="C1336_000100025"
FT                   /note="C1336_000100025 identified by Glimmer3 with a raw
FT                   score of 4.54."
FT   CDS             640550..640864
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100025"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000100025 identified by Glimmer3 with a raw
FT                   score of 4.54. Gene function extrapolated from C8J_0610
FT                   (CP000814.1) after blastn alignment (99.51 percent identity
FT                   over a 206 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31167.1"
FT                   /translation="MILDGIFLLFFLFFTDITYNFFIFSSWLAFFIFYYLCADWIKTNL
FT                   KIGKFIPVVFVLCAYGIILFLDMILSYIGDEKIKILGWAYIVSVFIECCLAYVFFKGKI
FT                   "
FT   gene            640865..642670
FT                   /locus_tag="C1336_000100026"
FT                   /note="C1336_000100026 identified by Glimmer3 with a raw
FT                   score of 9.99."
FT   CDS             640865..642670
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100026"
FT                   /product="penicillin-binding protein 2"
FT                   /note="C1336_000100026 identified by Glimmer3 with a raw
FT                   score of 9.99. Gene function extrapolated from
FT                   CJJ81176_0680 (CP000538.1) after blastn alignment (99.15
FT                   percent identity over a 355 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31168.1"
FT                   /translation="MRMRLVVGFILLFFIFLLSRVYYLSIKSNVYYEELAKQNAIKTEF
FT                   LAPVRGQITDRNGTLLAINDLGFSISIKPYLSIKKSNKGILDKELSELANLFPDLNASK
FT                   LAEIYKRNDSYYNQDFIKVVDFIPYDEIIPHYSELNLNKTIKIDPVVKRKYPFGKLASH
FT                   IIGYVGKANLQDVQENEIAKLSNYTGKSGIERYYNDILQGEKGTRVYKVNALNQEVEQL
FT                   SYTPAMSNDIELTIDIELQSYLTSLFEGNAGAAIIMNVNDGSILAAGSFPEYDLNPFVT
FT                   GISFKDWDELSNSLDHPFTNKLINGYYPPGSVVKMGVGLSFLNSKNISPTTQYVCNGSI
FT                   ELGGRFFRCWNRSGHGPVDLKHAIKYSCDVYFYNGSLQVGIDQISETLSRIGFGAKTGV
FT                   DLPSEFVGTLPSKEWKMQRYRQSWFQGDTLNTAIGQGSFLTTPMQIARYTAQIAKGGEV
FT                   IPHFLKSIENNNTTIENQMDENKKEIFTLFEKSQLPYIRDAMYAVANEQGGTSYRYLHN
FT                   LDVKVAAKTGTAQVVGFSQTDKNRVDEKQFEYYTRSHAWLTSYAPYSKPKYVVTVLLEH
FT                   GGRNITSGATVAKIYQKMIELGYFK"
FT   gene            complement(642791..644581)
FT                   /locus_tag="C1336_000100027"
FT                   /note="C1336_000100027 identified by Glimmer3 with a raw
FT                   score of 12.77."
FT   CDS             complement(642791..644581)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100027"
FT                   /product="peptidase, M24 family"
FT                   /note="C1336_000100027 identified by Glimmer3 with a raw
FT                   score of 12.77. Gene function extrapolated from C8J_0612
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 72 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31169.1"
FT                   /translation="MSIYKQRVLELRRLMKENNIDAYLILSADPHLSEYLPEYYKNRVF
FT                   ISGFKGSVGTVLITQEEGFLWVDGRYWLQAQKELEGSGILLQKQDAKNTFTKWLEKNLS
FT                   EDQILGIDFALLPLSLQKDLQINCKANLKHIDLISPLWKDRPTLPQEKIYEHELEYCSY
FT                   SRKEKLALVRQKMKNLNATSHLISSLDDIAWLTNLRGNDVNYNPVFLSHLLILEDKALL
FT                   FVDQKKVNSELEKKLNLDGFWLKNYDEIIMELEKLANTNLLIEPSKMTALLINSLDKSV
FT                   KIIQEINPSTHLKAAKNTKEIAHIQDAMIEDGVALCKFFAWLEEAIENKELISELDIDA
FT                   KASEFRAQSKYYISDSFATIAGFNENAAYPHYKATKESFAYLKKDGLLLIDSGGQYKNG
FT                   TTDITRVVPIGKANAEQIHDYTLVLKAHIAISSAIFPKDIAMPLLDAITRVPLWKEQID
FT                   YIHGTGHGVGYFLNVHEGPQVLSYLSPVLEKTKAKEGMLTSIEPGIYKVGKWGIRLENL
FT                   VIHTKVENPKNKDFGEFLYFKPVTLCPFEISCIDIKMLDEKEKEWLNNYHKEVFEKLSP
FT                   KLGDYPKALVWLEKRTKAIF"
FT   gene            complement(644597..645679)
FT                   /locus_tag="C1336_000100028"
FT                   /note="C1336_000100028 identified by Glimmer3 with a raw
FT                   score of 10.17."
FT   CDS             complement(644597..645679)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100028"
FT                   /product="di-/tripeptide transporter"
FT                   /note="C1336_000100028 identified by Glimmer3 with a raw
FT                   score of 10.17. Gene function extrapolated from C8J_0613
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 198 bp alignment).; overlaps another CDS
FT                   with the same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31170.1"
FT                   /translation="MCFNFGAFVAPLICGFLQKEYGWHFGFGAGGIGMLLAVIIFYLKT
FT                   MPDLKEFDEKVGIDSTWDRPSKKSKNAFYIIIVSGIVLLGAIFLILDGFIKLDAQVINK
FT                   NIILTILACAGIYFLYLFAFTSLKIEEKRNLIIFIVLFLAAALFWSVYEQQYTSFNFFA
FT                   EKLTDKTILNYEIPTIWFQSLGGLFVILFAPFSAFIWTICAKNNKEISSIIKFALGLLG
FT                   AALAFLIMALASNHAISLNGDANTLRENLENSSQIILVSPWWLVSSFLLMVLGELCLSP
FT                   VGLSIMTKIAPNLIKSQVMGLWFVASALGNALAGFIGGKASEENIAYLPNLFYQCMWIL
FT                   LGAVIILLILKKPINKILKN"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(645652..646149)
FT                   /locus_tag="C1336_000100029"
FT                   /note="C1336_000100029 identified by Glimmer3 with a raw
FT                   score of 12.92."
FT   CDS             complement(645652..646149)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100029"
FT                   /product="di-/tripeptide transporter"
FT                   /note="C1336_000100029 identified by Glimmer3 with a raw
FT                   score of 12.92. Gene function extrapolated from
FT                   CJJ81176_0683 (CP000538.1) after blastn alignment (99.40
FT                   percent identity over a 498 bp alignment).; overlaps
FT                   another CDS with the same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31171.1"
FT                   /translation="MSKNVKNLDTSFFGHPKPLLSLSLTELWERFSFYGIRPLLYLFMI
FT                   ASFEKIGMNLKPEEASAIMGIFASCLYLAALPGGWLADNYLGQKRAILLGALTIAFGHL
FT                   CIAFSYFNNKMIFVGMFFLVIGTGLFKTCASVMVGMLYKKMMQGVTLVLLFFICALILV
FT                   LL"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(646322..646567)
FT                   /locus_tag="C1336_000100030"
FT                   /note="C1336_000100030 identified by Glimmer3 with a raw
FT                   score of 6.59."
FT   CDS             complement(646322..646567)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100030"
FT                   /product="di-/tripeptide transporter"
FT                   /note="C1336_000100030 identified by Glimmer3 with a raw
FT                   score of 6.59. Gene function extrapolated from
FT                   CJJ81176_0684 (CP000538.1) after blastn alignment (97.56
FT                   percent identity over a 246 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31172.1"
FT                   /translation="MAEITPDLIENQVMGLWFVASALGNFVAGLIGGNVNIKNIDQLPN
FT                   IFEQCMWMLFVIALLLFIAKKPIYKILNEKNKQLSN"
FT   gene            complement(647150..647266)
FT                   /locus_tag="C1336_000100031"
FT                   /note="C1336_000100031 identified by Glimmer3 with a raw
FT                   score of 13.40."
FT   CDS             complement(647150..647266)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100031"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100031 identified by Glimmer3 with a raw
FT                   score of 13.40. Gene function extrapolated from CJE0759
FT                   (CP000025.1) after blastn alignment (98.99 percent identity
FT                   over a 99 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31173.1"
FT                   /translation="MLISLLILYFKAAPELEEFHKNCTLKQNWEQPFKKVKI"
FT   gene            complement(647552..647710)
FT                   /locus_tag="C1336_000100032"
FT                   /note="C1336_000100032 identified by Glimmer3 with a raw
FT                   score of 4.45."
FT   CDS             complement(647552..647710)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100032"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100032 identified by Glimmer3 with a raw
FT                   score of 4.45. Gene function extrapolated from C8J_0614
FT                   (CP000814.1) after blastn alignment (92.00 percent identity
FT                   over a 150 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31174.1"
FT                   /translation="MLFIPTTINKGGLGIGTQYALAIYGIAGCLYLAALPKDWITDNYL
FT                   EQKRLYF"
FT   gene            complement(647930..648478)
FT                   /locus_tag="C1336_000100033"
FT                   /note="C1336_000100033 identified by Glimmer3 with a raw
FT                   score of 9.15."
FT   CDS             complement(647930..648478)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100033"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100033 identified by Glimmer3 with a raw
FT                   score of 9.15. Gene function extrapolated from
FT                   CJJ81176_0686 (CP000538.1) after blastn alignment (98.84
FT                   percent identity over a 173 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31175.1"
FT                   /translation="MNKIEVFLQNLNPREKFLFISFICLCALFLAFKIHDHFLEDIFQK
FT                   TLIEHNYLALNEAKIEISHLKEIETKLTKQIKTEEEKLKYYKEKLHLFSYDKDFFNKKI
FT                   NNLSKNLTINEIKFSQENKNFIHYNYISLSLNGNFKDLLNFIQNLENLPIALKIDKIKL
FT                   YNTQGLKLKLDLMFKFINL"
FT   gene            complement(648471..649574)
FT                   /locus_tag="C1336_000100034"
FT                   /note="C1336_000100034 identified by Glimmer3 with a raw
FT                   score of 6.32."
FT   CDS             complement(648471..649574)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100034"
FT                   /product="putative transmembrane protein"
FT                   /note="C1336_000100034 identified by Glimmer3 with a raw
FT                   score of 6.32. Gene function extrapolated from Cj0660c
FT                   (AL111168.1) after blastn alignment (98.53 percent identity
FT                   over a 407 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31176.1"
FT                   /translation="MKINSLNKINFIKSTDLLYTQRTGISKEDELFNNLTADFKLSKPF
FT                   DYQIAFFKHNEIYHCFLAPVYKLKKSRFCFPEPLIFQALFDERFIKESDYCVLNLYDQT
FT                   LYLYFYQEGKFINLKKIENFNPSNMDLFFKQNRFIELLKHYESKLLLYQDLDTIKHYFS
FT                   SQIKCLNLNDILDKNSLLKLSSYSIKNLDQNCNFIKHNKIKISISFKIILIFIFSFSLS
FT                   MIILLFKDFIEYKQNKEIQNKNFIIQEEISKLKQDKQKLLTNIQDLNFTLSNKILSTQQ
FT                   QFHILSIITKEINLEKNKAIILNQIISWLNSNELKITNLEFEQTKIILSFIDENHFKRA
FT                   LENLNSAFKIFDKNEETFNIILEVIHE"
FT   gene            complement(649564..650439)
FT                   /locus_tag="C1336_000100035"
FT                   /note="C1336_000100035 identified by Glimmer3 with a raw
FT                   score of 13.88."
FT   CDS             complement(649564..650439)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100035"
FT                   /product="GTP-binding protein ERA-like protein"
FT                   /note="C1336_000100035 identified by Glimmer3 with a raw
FT                   score of 13.88. Gene function extrapolated from C8J_0617
FT                   (CP000814.1) after blastn alignment (98.85 percent identity
FT                   over a 348 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31177.1"
FT                   /translation="MKSGFVSIIGRTNAGKSTLINSLLEEKIALVSHKQNATRRKIKAI
FT                   VMHEKNQIIFIDTPGLHESGARLNQLLVQSAIKSMRDCDMILFVASVFDNTKDYENFLS
FT                   LSPQVPHIIALNKVDLTDNATLLKKLSEYAKFSEYFKAIIPYSSKKKNYKKDLLDEIVK
FT                   YLDEHEYFYDPEFLSASSEKELYRDFILESIYENLSDELPYSSEVLIHRTKDTPNLLIL
FT                   EANIITDTNSHKGMLIGKEGATLKRIGKDARFKISKLAQKKVLLKLFVTVKKNWQKDEE
FT                   FLKKLLNDEN"
FT   gene            complement(650436..651755)
FT                   /locus_tag="C1336_000100036"
FT                   /note="C1336_000100036 identified by Glimmer3 with a raw
FT                   score of 13.77."
FT   CDS             complement(650436..651755)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100036"
FT                   /product="ATP-dependent Hsl protease ATP-binding subunit"
FT                   /note="C1336_000100036 identified by Glimmer3 with a raw
FT                   score of 13.77. Gene function extrapolated from Cj0662c
FT                   (AL111168.1) after blastn alignment (99.06 percent identity
FT                   over a 213 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31178.1"
FT                   /translation="MNLTPKEIVKFLDDYVIGQKKAKKIIAIALRNRYRRMQLSPELQD
FT                   DIVPKNILMIGSTGVGKTEIARRLAKMMGFPFIKIEASKYTEVGFVGRDVESMVRDLAN
FT                   AALNLVKNEQREKNKDKIDEFIENKILEKLLPPLPKGISDEKQEEYKNSLEKMRTKLRN
FT                   GDLDESTIEIEISQNMFDTNPNLPPEMGAMQDIVKVIGVGSKKVKKEMKIKDAKNALKN
FT                   EAGEKILDQESIKSEALKRAENEGIIFIDEIDKIAVSSGNSNRQDPSKEGVQRDLLPIV
FT                   EGSNVQTKIGTLKTDHILFIAAGAFHLSKPSDLIPELQGRFPLRVELDSLDDKALYEIL
FT                   TRPKNSLLKQYSQLLKTEKLELDFDDEAIKEIAKIASRANEEMQDIGARRLHTVIEKLL
FT                   EDLSFEADEYAGKKFVVDKKMVEEKLGDIIENKDLARYIL"
FT   gene            complement(651752..652294)
FT                   /locus_tag="C1336_000100037"
FT                   /note="C1336_000100037 identified by Glimmer3 with a raw
FT                   score of 14.91."
FT   CDS             complement(651752..652294)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100037"
FT                   /product="ATP-dependent protease HslVU, HslV subunit"
FT                   /note="C1336_000100037 identified by Glimmer3 with a raw
FT                   score of 14.91. Gene function extrapolated from CJE0765
FT                   (CP000025.1) after blastn alignment (98.34 percent identity
FT                   over a 543 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31179.1"
FT                   /translation="MFHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGK
FT                   VLAGFAGSTADAFNLFDMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDR
FT                   NHIFLLSGTGDVVEPEDGQIAAIGSGGNYALSAARALAKHANLDEEELVKSSLQIAGEI
FT                   CIYTNTNIKTYVIEDEK"
FT   gene            complement(652294..652737)
FT                   /locus_tag="C1336_000100038"
FT                   /note="C1336_000100038 identified by Glimmer3 with a raw
FT                   score of 16.80."
FT   CDS             complement(652294..652737)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100038"
FT                   /product="ribosomal protein L9"
FT                   /note="C1336_000100038 identified by Glimmer3 with a raw
FT                   score of 16.80. Gene function extrapolated from CJE0766
FT                   (CP000025.1) after blastn alignment (99.32 percent identity
FT                   over a 444 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31180.1"
FT                   /translation="MKVLLIKDVKALGKAGEIKEVKDGYGQNFLIAKGFAKAATNEVLR
FT                   KYESDKKKEAENLRFEIANLEKLKEELSKITLEISKPVGANGSLFGGVTKDEIAHALKE
FT                   QSHIEIDKKSLECDTLKSLGIHEVSVKLGHAIHAKFNINIKAE"
FT   gene            complement(652750..653970)
FT                   /locus_tag="C1336_000100039"
FT                   /note="C1336_000100039 identified by Glimmer3 with a raw
FT                   score of 14.72."
FT   CDS             complement(652750..653970)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100039"
FT                   /product="argininosuccinate synthase"
FT                   /note="C1336_000100039 identified by Glimmer3 with a raw
FT                   score of 14.72. Gene function extrapolated from
FT                   CJJ81176_0692 (CP000538.1) after blastn alignment (98.08
FT                   percent identity over a 1200 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31181.1"
FT                   /translation="MKNEVKKVVLAYSGGLDTSIILKWLQDEYNCEVVTFTADIGQGEE
FT                   LEPARKKALSLGIKEENIFIKDLRDEFVKDYVFPMFRANAIYEGEYLLGTSIARPLIAK
FT                   TQAQIALQTGADAVSHGATGKGNDQVRFELGYLAFNPDLKIIAPWREWDLNSREKLLAY
FT                   AQKHGIDISKKKGKSPYSMDANLLHISYEGLVLEDPAHAPQEDMWRWSKSPKDAPNESE
FT                   IIELDFQKGDLVAINGEKLSPAGLLTKLNELGCKHGIGRLDIVENRYVGMKSRGCYETP
FT                   GGTILLKAHRALESITLDREAAHLKDELMPKYASLIYNGYWFSPERMMLQALIDESQIH
FT                   ANGRVKLELYKGNVMVIGRESANDSLFNAAYCTFEEDEVYNQKDAAGFIKLNALRFIIA
FT                   GKNGRKF"
FT   gene            654086..654370
FT                   /locus_tag="C1336_000100040"
FT                   /note="C1336_000100040 identified by Glimmer3 with a raw
FT                   score of 5.87."
FT   CDS             654086..654370
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100040"
FT                   /product="S4 domain protein"
FT                   /note="C1336_000100040 identified by Glimmer3 with a raw
FT                   score of 5.87. Gene function extrapolated from
FT                   CJJ81176_0693 (CP000538.1) after blastn alignment (97.97
FT                   percent identity over a 246 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31182.1"
FT                   /translation="MFQKLIFFAKIAFMRVDKFLNVVNITKRRAISEDMCKSGIVGING
FT                   VIVKASKEVKVGDIITLHFIEYTQKYKVLAIPSTKSIPKNAQNEYVVKL"
FT   gene            654367..654774
FT                   /locus_tag="C1336_000100041"
FT                   /note="C1336_000100041 identified by Glimmer3 with a raw
FT                   score of 11.18."
FT   CDS             654367..654774
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100041"
FT                   /product="putative ATP/GTP-binding protein"
FT                   /note="C1336_000100041 identified by Glimmer3 with a raw
FT                   score of 11.18. Gene function extrapolated from C8J_0623
FT                   (CP000814.1) after blastn alignment (99.26 percent identity
FT                   over a 408 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31183.1"
FT                   /translation="MKEFILAKDEIKTMLQIMPKEGVVLLQGDLASGKTSLVQAWVKFL
FT                   GLDARVDSPTFSTMQKYENHDICIYHYDIYQEGLEGLLANGLFENFFEKGLHLVEWGGE
FT                   NLKKTLMKFGISTIQIKISIKDDKRKYEIYE"
FT   gene            654767..655495
FT                   /locus_tag="C1336_000100042"
FT                   /note="C1336_000100042 identified by Glimmer3 with a raw
FT                   score of 14.41."
FT   CDS             654767..655495
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100042"
FT                   /product="ABC transporter, ATP-binding protein"
FT                   /note="C1336_000100042 identified by Glimmer3 with a raw
FT                   score of 14.41. Gene function extrapolated from
FT                   CJJ81176_0695 (CP000538.1) after blastn alignment (98.83
FT                   percent identity over a 683 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31184.1"
FT                   /translation="MSKLEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTTT
FT                   FYMICGLISPSSGKVLLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLAAQ
FT                   IFYKDKKILHDKVEQMLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLLDEP
FT                   FAGVDPIAVAEIQTLIKELKRLGIGVLITDHNVRETLAICDRAYVIRSGSLLASGNADE
FT                   IATNKDVKKYYLGAEFKLLD"
FT   gene            655495..656745
FT                   /locus_tag="C1336_000100043"
FT                   /note="C1336_000100043 identified by Glimmer3 with a raw
FT                   score of 12.63."
FT   CDS             655495..656745
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100043"
FT                   /product="RNA polymerase sigma-54 factor"
FT                   /note="C1336_000100043 identified by Glimmer3 with a raw
FT                   score of 12.63. Gene function extrapolated from C8J_0625
FT                   (CP000814.1) after blastn alignment (98.24 percent identity
FT                   over a 1251 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31185.1"
FT                   /translation="MLKQKITQAPKTKISQTLRSWLPILQVNIEDLKENLDKFAEDNPF
FT                   LNVQDSIQTHDKGKNYFDLFYKHNVNSAFVDSKGLAKKSVYELLNEQILPPLFPTNKSQ
FT                   ELAKKIIECLNEEGYFEYDEEFLKEYSLEEIERVRARFKFLDPVGVGAKDYKEAFLFAL
FT                   ENMELDEDIDEFCRMLIMDFENMQNYTKEPLYKEALAVLKRFSTPPFLEYFEDSRIIVP
FT                   DIFVYKENGEIKVKINDDYYPEISIQTDGLEHDFLSHYIKEAKNLVDALAMRKATLYKI
FT                   GLMIVEYQYDFFMGKEIKPMTFKDLALDLERNASTISRAVANKYLSCERGLIPLRDFFA
FT                   FALDEEGETSNVGVKEFVANLVKNEDRNKPLSDSKILELIKEEFKVDIGRRTITKYRKH
FT                   LNIASSTDRKKIYELEG"
FT   gene            656910..658334
FT                   /locus_tag="C1336_000100044"
FT                   /note="C1336_000100044 identified by Glimmer3 with a raw
FT                   score of 13.56."
FT   CDS             656910..658334
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100044"
FT                   /product="anaerobic C4-dicarboxylate membrane transporter
FT                   DcuB"
FT                   /note="C1336_000100044 identified by Glimmer3 with a raw
FT                   score of 13.56. Gene function extrapolated from C8J_0626
FT                   (CP000814.1) after blastn alignment (98.53 percent identity
FT                   over a 1425 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31186.1"
FT                   /translation="MDFLTSLSEGGQFAIQIIIVLICLFYGAKKGGIALGLLGGIGILM
FT                   LVFAFHIKPGKPAIDVMLTILAVVVASATLQASGGLDVMLQIAERILRRNPKFLTILAP
FT                   FVTCFLTILCGTGHVVYTIMPIIYDIAIKNGIRPERPMAAASISSQMGIIASPVSVAVV
FT                   SLTALLLNANHKLAGFDGYINLLQITIPSTLFGVLCIGIFSWFRGKDLDKDEVFQEKLK
FT                   DPEFKKYVYGDSKTLLGVKLPKSNWVAMWIFLGAIALVALLGVFDFLRPNWGQVVKNGI
FT                   PQVDALGNPKMDVLSMVSVIQMFMLLAGSLIIIFTKTDAKKIGSNEIFKSGMIALVAVF
FT                   GISWMADTMFAVHTPMMKAALGDIVKEHPWTYAVMLLLISKFVNSQAAAISAFVPLALG
FT                   IGVEPGVIVAFAAACYGYYILPTYPSDLATIQFDRSGTTHIGKFVINHSFILPGLIGVI
FT                   TSCIAGYFIAMAAGYL"
FT   gene            658476..658589
FT                   /locus_tag="C1336_000100045"
FT                   /note="C1336_000100045 identified by Glimmer3 with a raw
FT                   score of 5.35."
FT   CDS             658476..658589
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100045"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100045 identified by Glimmer3 with a raw
FT                   score of 5.35. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31187.1"
FT                   /translation="MRKGYPMDVIFALLLLLAFGSLWFFIRFCEIQIRTRG"
FT   gene            658673..660364
FT                   /locus_tag="C1336_000100046"
FT                   /note="C1336_000100046 identified by Glimmer3 with a raw
FT                   score of 12.89."
FT   CDS             658673..660364
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100046"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100046 identified by Glimmer3 with a raw
FT                   score of 12.89. Gene function extrapolated from C8J_0628
FT                   (CP000814.1) after blastn alignment (99.55 percent identity
FT                   over a 664 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31188.1"
FT                   /translation="MLEILITLIIAFILALIFGNYLYKIASCKKTIFDFIFNPIDNLIY
FT                   KICAIDRKNMTWQKYSLHLIAFNALVAIFSFVIFYLQDKLFLNPNSINSMKGDLNLNTV
FT                   ISFITNTNLQHYSGESALSLLSQNTGILLAMFVSSASGYSACMAFCRALCGMQMGNFYE
FT                   DFTRIITRLMLPLSFILAVIFISEGVVQNYHANFSVLTLENKFQSIATGPVAALESIKH
FT                   LGTNGGGFFGANSSMPFENPTSLTNFLQILSMMLIPSACVVAFGLMVYHRKERQGFALM
FT                   GKEGGVIFGAMGIIFIISLLLIYFSEKMSNPNLDSLGLNANLGNLEGKEIRFGTDGSSL
FT                   FSAVTTAFTTGSVNNMHDSLNPLSISATLLNMMLNVAFGGEGVGLMNMIIYVLLTVFIC
FT                   ALMIGRTPEFLGKKIESAQMKLIALVILIHPLLILVLSALAVVFAKDSISNPSFHGLAQ
FT                   ILYEFSSSAANNGSGLEGLKDDNLFWNLSTAFAMFCGRYLVLIAQLAIAGSLLAKNTQE
FT                   NTANSLKTDNLTFMFVLVCIIYIFAALTFFPVLTLSSVAEYLSLWH"
FT   gene            660374..662419
FT                   /locus_tag="C1336_000100047"
FT                   /note="C1336_000100047 identified by Glimmer3 with a raw
FT                   score of 16.50."
FT   CDS             660374..662419
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100047"
FT                   /product="potassium-transporting ATPase B chain"
FT                   /note="C1336_000100047 identified by Glimmer3 with a raw
FT                   score of 16.50. Gene function extrapolated from C8J_0629
FT                   (CP000814.1) after blastn alignment (98.70 percent identity
FT                   over a 1233 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31189.1"
FT                   /translation="MSKKQNKLITKEILNNAIKGAFLKFDPRFMIKNPVMFMVEVGLIL
FT                   TLILSIFPTLFNGNSDERIYNILITFILFVTLLFANFAESIAEGRGKAQAATLRQSKKD
FT                   SKARRIKSDGSEEMLNSSELKIGDIVLVKAGELIPNDGEIIEGAASVDESAITGESAPV
FT                   MREAGGDFSSVTGGTTVLTDFLKIKILVGAGESFLDKMINLVEGAARQKTPNEIALNTL
FT                   LIVLSLSFLVVVVSLYPFMQFLGVSLPISWLVALLVCLIPTTIGGLLSAIGIAGMDRVT
FT                   RFNVIALSGKAVESCGDVDTMILDKTGTITFGNRLANEFYEVQGISKEEMIKACVLSSL
FT                   KDETPEGKSIVALAQKMGYELEGNDIKEFIEFSAQNRMSGVDLQDNTKIRKGAFDAIRA
FT                   YISEMNGKIPSDLETKVMEISNLGGTPLVVCKNEKILGVIYLKDTVKPGLKERFDELRK
FT                   MGIKTLMCTGDNPLTAATIAKEAGLDGFIAECKPEDKIEAIKKEQAQGKIVAMTGDGTN
FT                   DAPALAQADVGIAMNSGTQAAKEAANMIDLDSNPTKILEVVEIGKGLLITRGSLTTFSM
FT                   ANDIAKYFAILPAMFSVVLPQMQILNIMHLATPQSAILSALIFNAIIIPLLIPIAMRGV
FT                   KFKPMKSEYLLLRNLSIYGLGGMIAPFIGIKIIDIPTAWILRILGV"
FT   gene            662421..663029
FT                   /locus_tag="C1336_000100048"
FT                   /note="C1336_000100048 identified by Glimmer3 with a raw
FT                   score of 14.42."
FT   CDS             662421..663029
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100048"
FT                   /product="potassium-transporting ATPase, C subunit,
FT                   putative"
FT                   /note="C1336_000100048 identified by Glimmer3 with a raw
FT                   score of 14.42. Gene function extrapolated from C8J_0630
FT                   (CP000814.1) after blastn alignment (98.36 percent identity
FT                   over a 609 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31190.1"
FT                   /translation="MLRTLLSFFVVMLILCTLIYPFALNTVAKFIFPYQSSGSLVDKEG
FT                   RPTLDISKAVGSKLLGQDFNKPYFLHSRTSVSNYNTSDTNESSVSSGGFNYAMSNPALK
FT                   ERVQKDLQKFLDENPQITKEQIPLDLLSASGSGLDPHISLQAALVQIPRISQSSKITKE
FT                   ELEKIIQENTESKFLGIFGEEKVNVLAVNIAIAKAMKKE"
FT   gene            663032..664963
FT                   /locus_tag="C1336_000100049"
FT                   /note="C1336_000100049 identified by Glimmer3 with a raw
FT                   score of 14.66."
FT   CDS             663032..664963
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100049"
FT                   /product="KdpD protein"
FT                   /note="C1336_000100049 identified by Glimmer3 with a raw
FT                   score of 14.66. Gene function extrapolated from C8J_0631
FT                   (CP000814.1) after blastn alignment (99.52 percent identity
FT                   over a 1044 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31191.1"
FT                   /translation="MQRQSPEQILKKLEVKAKEEEKNKLAKLKIFLGYAAGSGKTYAML
FT                   SEARTLRDNGVDVVLGYIEPHDRPETMALTQGFESIANLEIPYKNIVLKEFDLDATLKR
FT                   KPALVLVDELAHTNAKGLRNEKRFQDIEELLKAGIDVYTTLNIQHLESLNDLVANISKI
FT                   EVKERIPDRIFDEADQVELVDIEPNKLLKRMQDGKIYKEKQAKLALENFFRQERLIALR
FT                   EIALRRLASRVNLRASEQRLINDDLAYHTGEHILVCINASNAKVIRAAARLALAFHAKL
FT                   SALYIKNPNIKEEKALEENIELAKSFDAEIISVYDDDIARQIAEYSSLSNVSKIVLGKN
FT                   KDKKKFKEEIFEAVAKKAPNIDLYLVNENQISTPKIRSKKGFDFLGFLKITGVLLLATF
FT                   IAFVFHKFNTQPSNIVMIFILAVFASSFISDNKIFAFYSSLVSVLIYNFFFLEPIFSFK
FT                   VHDSGNIITFTTMFIVGFLTAVFTRRLKLQSKELTKRAYRTAILLENSEKLARVKSKQE
FT                   LWEQLGNQALKLLNLPIIIYPINKNNILSKPLLFFNDDKQMLKNCFSADEIAIAQWVAT
FT                   NKERAGVCTNTLPNANAMYLPIEDGEKTKGVIGIVLKEKRPLQDFQYEILSALLNEAGV
FT                   RTRDIFLL"
FT   gene            complement(664958..666931)
FT                   /locus_tag="C1336_000100050"
FT                   /note="C1336_000100050 identified by Glimmer3 with a raw
FT                   score of 12.53."
FT   CDS             complement(664958..666931)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100050"
FT                   /product="excinuclease ABC subunit B"
FT                   /note="C1336_000100050 identified by Glimmer3 with a raw
FT                   score of 12.53. Gene function extrapolated from C8J_0632
FT                   (CP000814.1) after blastn alignment (98.44 percent identity
FT                   over a 128 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31192.1"
FT                   /translation="MLELTSEFKPSPDQQEAIKGIVKSIKKGNKYQTLLGVTGSGKTFT
FT                   MANVIKELNIPTLIMSHNKSLCAQLYSEFKGFFSKNHVEYFISYYDYYQPEAYIPRTDV
FT                   FIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFELGMQ
FT                   ISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMY
FT                   HYNVLENKKGKDLKRFILYPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQ
FT                   RLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPYTLFDYFAIKDRKFLVIVDES
FT                   HVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKNCQFLFVSATPAPL
FT                   ELELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKL
FT                   AEELTRYYLELGIKVKYMHSDIDAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSL
FT                   IAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKSMQEAMDTTNERRKLQM
FT                   AYNKKYNITPASVKRHIEESLKNEEDLGEIYRKGKKLEKMPASERAKLVKELRKQMLEA
FT                   AKALEFEKAAAIRDEINKLRDL"
FT   gene            667085..667315
FT                   /locus_tag="C1336_000100051"
FT                   /note="C1336_000100051 identified by Glimmer3 with a raw
FT                   score of 14.55."
FT   CDS             667085..667315
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100051"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100051 identified by Glimmer3 with a raw
FT                   score of 14.55. Gene function extrapolated from
FT                   CJJ81176_0704 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 231 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31193.1"
FT                   /translation="MFDEKIINTMTDKVNELIEKYNEVCEANEALRNELVSVKAQNEAK
FT                   SNQIMRLEEELKSRNIESEDIYKKIEAVLGR"
FT   gene            667305..667547
FT                   /locus_tag="C1336_000100052"
FT                   /note="C1336_000100052 identified by Glimmer3 with a raw
FT                   score of 6.44."
FT   CDS             667305..667547
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100052"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100052 identified by Glimmer3 with a raw
FT                   score of 6.44. Gene function extrapolated from C8J_0634
FT                   (CP000814.1) after blastn alignment (99.18 percent identity
FT                   over a 243 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31194.1"
FT                   /translation="MADNLKQVIVNVNAKDFIVKCSEEFANFLEDDIALISGGTKKIEL
FT                   KRFVDAFVKKSYENYILERELKKLIKAINEELPTK"
FT   gene            667544..667981
FT                   /locus_tag="C1336_000100053"
FT                   /note="C1336_000100053 identified by Glimmer3 with a raw
FT                   score of 13.38."
FT   CDS             667544..667981
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100053"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000100053 identified by Glimmer3 with a raw
FT                   score of 13.38. Gene function extrapolated from C8J_0635
FT                   (CP000814.1) after blastn alignment (99.09 percent identity
FT                   over a 438 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31195.1"
FT                   /translation="MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYE
FT                   MLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEKLFYCLNDCDYSLLDTPIYSDFKSW
FT                   IKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI"
FT   gene            667963..669816
FT                   /locus_tag="C1336_000100054"
FT                   /note="C1336_000100054 identified by Glimmer3 with a raw
FT                   score of 13.48."
FT   CDS             667963..669816
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100054"
FT                   /product="primosomal protein N'"
FT                   /note="C1336_000100054 identified by Glimmer3 with a raw
FT                   score of 13.48. Gene function extrapolated from CJE0782
FT                   (CP000025.1) after blastn alignment (99.14 percent identity
FT                   over a 116 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31196.1"
FT                   /translation="MQRFDIRYYELAICGLYLDNLTFHSFDEIKPLTQVLVDLKTKKNL
FT                   KAIVLKECQKPDFKTVEIKEITGYFLTPLQFELANFIVYYYASKLGFVLGFFETSPKYE
FT                   CQKMFFKDTPKLSNQQQNALSFLQKENNSLLFADTGSGKTEIYISLIKECLEQGKQALL
FT                   LMPEIALTPQMKKRLEVYFKDNFFLWHSKISKKKKQEYLERFCKGEVLLVAGARSALFL
FT                   PFRNLGLIVVDEEHDNSYKASNQPFINARDLALFLGQKNNIKVVLGSATPSLTSFYKQK
FT                   SFRLKGTFFESKKHFLYDENELGITPMLLSELEKSLKHQKQAIVFLPTRANFRQIICKD
FT                   CGETIKCPFCSIAMSMHKKKNVLKCHYCNYTSLIEQNCPSCKGEMLEARKMGTAELLEL
FT                   LQNALPLAKIAKFDSDEITSVKKLNTILKDFNEDKIDILIGTSMLAKGHDYHSVDLSVI
FT                   LGLDEYLLRPNFRASEETLALAMQVAGRAGRKGEARVLLQTKNRAFFERYIENYDAFLK
FT                   DELENRKDLYPPFKRLLRVLIEDKDQKSAQKLCEKFASQFKNIKQVELVGYGICGVEML
FT                   HGKYRFYLLLRSENHKVLVAIENYILQFKNVSADIDPIDFV"
FT   gene            complement(669826..671220)
FT                   /locus_tag="C1336_000100055"
FT                   /note="C1336_000100055 identified by Glimmer3 with a raw
FT                   score of 5.29."
FT   CDS             complement(669826..671220)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100055"
FT                   /product="invasion phenotype protein"
FT                   /note="C1336_000100055 identified by Glimmer3 with a raw
FT                   score of 5.29. Gene function extrapolated from C8J_0652
FT                   (CP000814.1) after blastn alignment (99.53 percent identity
FT                   over a 1074 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31197.1"
FT                   /translation="MQNLLLYINNNLTPTLAQILLQALKNSNNEKFFTFVLENIEIICT
FT                   WLNSSEFKNRYLSIKHPYPPLINPNFIEIDASRHCAELAWDLNLPLPKHYKFIYISPHG
FT                   VGAAAFLRYLNQCCDVTCFASWVLPPDAKERYCLNYMCLNDNTITQYAINISEINLPYF
FT                   DKYLSLLDFNSKIICGVRDPIGILKHNWGRDWSKVLRNYPSEFNLTYDWRYYIDYLTHQ
FT                   NHKIKIDINELQQGVFIISYLLKYFNKDNVYYLDMEEIRQSKAFDTMNLLAINFNFTPP
FT                   HKDKLDLFKIKEFRGYIRYLFPITLYANSKDINNTFYLNTPKNNKNFNIDKTSSIPIIL
FT                   DRKHINHEKIDIIQEIIKNDLCNDMGVYIDKNDFKQLEQNNLLFSTIKHYLYDFLYQIK
FT                   ITIDETESKMMKEKDVIDYFIKNKSLIYTFFNIFENELNHLKQTHPHIIDSWKYYKEFE
FT                   KIYKDK"
FT   gene            671366..672439
FT                   /locus_tag="C1336_000100056"
FT                   /note="C1336_000100056 identified by Glimmer3 with a raw
FT                   score of 15.79."
FT   CDS             671366..672439
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100056"
FT                   /product="4-hydroxy-3-methylbut-2-en-1-yl diphosphate
FT                   synthase"
FT                   /note="C1336_000100056 identified by Glimmer3 with a raw
FT                   score of 15.79. Gene function extrapolated from C8J_0654
FT                   (CP000814.1) after blastn alignment (98.88 percent identity
FT                   over a 1074 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31198.1"
FT                   /translation="MEYKRFKTRQIKVGDVLIGGDAPISVQSMLFTKTRDIEGSLEQIN
FT                   RLYFAGANIVRLACLDMADARALKEIKAKSPLSLIVDIHFNHNLAVYCAEFIDGVRINP
FT                   GNIGSKENIKEVVKACKERGIPIRIGVNHGSIEKQFSDKFGYGVDAMLESAMYNIKLLE
FT                   DLDFFDIKISMKTSDAQKTIEAYERLRPLCDYPFHLGVTEAGTKFHSTVKSSIALGNLL
FT                   LKGIGDTMRVSMTGELEEEIRVARAILQDSGVQKSGVNIISCPTCGRIQSDLLSAIKIV
FT                   EEKTKHIKEPLNISVMGCVVNALGEAKGADVAIAFGKNQGLVIRHGEVVAKLKESELVD
FT                   RFLAEVEDEVKSRAVKE"
FT   gene            complement(672469..673167)
FT                   /locus_tag="C1336_000100057"
FT                   /note="C1336_000100057 identified by Glimmer3 with a raw
FT                   score of 11.17."
FT   CDS             complement(672469..673167)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100057"
FT                   /product="putative flagellar L-ring protein precursor"
FT                   /note="C1336_000100057 identified by Glimmer3 with a raw
FT                   score of 11.17. Gene function extrapolated from C8J_0655
FT                   (CP000814.1) after blastn alignment (99.43 percent identity
FT                   over a 699 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31199.1"
FT                   /translation="MKKVLFYVLPFAFFGCSATVDPQISMKPPAYVEELAPKQSNNVES
FT                   APGSLFGKGDNPLFSDKKAMNVNDLVTVVIQESTTQSTQANKATSRTNTSNLGGGALTG
FT                   SSGVVANALNKVNAYSNIGFQTNSSNKYTGTGSQSRNESFNTTISTRVIKILSNGNYFI
FT                   EGSRELLINGEKQIIQLSGVIRPYDIGQDNTIDSKYIADAKILYKTEGEVDRSTRKPWG
FT                   SKVIEAIWPF"
FT   gene            673260..674762
FT                   /locus_tag="C1336_000100058"
FT                   /note="C1336_000100058 identified by Glimmer3 with a raw
FT                   score of 13.03."
FT   CDS             673260..674762
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100058"
FT                   /product="phosphate acetyltransferase"
FT                   /note="C1336_000100058 identified by Glimmer3 with a raw
FT                   score of 13.03. Gene function extrapolated from C8J_0656
FT                   (CP000814.1) after blastn alignment (98.94 percent identity
FT                   over a 566 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31200.1"
FT                   /translation="MANLYLMRSRSDELNTIISTNLLKNYSKIYKNIAIYCPVIYIHRV
FT                   PVLQGWLEEFNINQTVKSAYGFTFREAMEEFSKDPHNFFNVILEEYEELKRKYDFVLVN
FT                   SFCEFGILDGFDLSIKLAKNLNTPIAAIINDEDKLIAQKYFDHALDGRNYVLINEKFNF
FT                   EEVQKLEEYDFITPHRFKYELIKQSVKNKKTVVLPESNDERILKATEILLKSKVVDLIL
FT                   LGDEEKIKQDAARLSLDLSTIQIMNPLNSEYNQEFTSILYEARKSKGMSLEEAKMLVQD
FT                   KTYFGTLLIHTGKADAMVSGASTTTAETIRPALQLIKTKEGISSVSGIFFMGLEDQVLA
FT                   FADCAVNPSPTAEQLATSAYVSAMTAKSFGLEPRIALLSYSSGDSGKGESVDLVKEALK
FT                   IAKEKYPELNIDGPMQFDCAYDLKTAAKKMPNSKIAGHANVYIFPDLNAANICYKAVQR
FT                   TANALAIGPILQGLKKPVNDLSRGCLVDDIVDTVILSAIQAQ"
FT   gene            674776..675963
FT                   /locus_tag="C1336_000100059"
FT                   /note="C1336_000100059 identified by Glimmer3 with a raw
FT                   score of 12.77."
FT   CDS             674776..675963
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100059"
FT                   /product="acetate kinase"
FT                   /note="C1336_000100059 identified by Glimmer3 with a raw
FT                   score of 12.77. Gene function extrapolated from Cj0689
FT                   (AL111168.1) after blastn alignment (97.27 percent identity
FT                   over a 1173 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31201.1"
FT                   /translation="MKILVLNSGSSSIKFKFFDNKIVKASGLVEKIGEQNSKVILKNVL
FT                   NNESFERELTINNHEEGLSIVNELFKESGILADLNALDGCGHRIVHGGRNLSEHCLVDD
FT                   YVLKEIDRVSIFAPLHNPAHLAGIKTMIKAAPSVANAAIFDTAFHRTMPDFAYMYALPY
FT                   DFYDKHNIRRYGFHGTSHAYVSSRAAKFLQKDQDELNVISAHLGNGASVCAIEKGKSVD
FT                   TSMGFTPLEGLIMGTRCGDIDPAILPFISHVKGLTIEEIDTLMNKKSGVYGICGYNDFR
FT                   DIEREIEQGNDKARLALDMFCYRLVKYIGSYFAVLPKTDAIIFTGGIGENDSLVRQKVC
FT                   ERLAHLGIELDFELNKQRISGERMINHANSKVKVLVIPTDEELEIARITEELISN"
FT   gene            676034..676525
FT                   /locus_tag="C1336_000100060"
FT                   /note="C1336_000100060 identified by Glimmer3 with a raw
FT                   score of 10.08."
FT   CDS             676034..676525
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100060"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100060 identified by Glimmer3 with a raw
FT                   score of 10.08. Gene function extrapolated from C8J_0658
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 159 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31202.1"
FT                   /translation="MKKFKEFSLRFLFKVSEQPVLVKDLLEANALFNDGMLVDPSKLNF
FT                   NFKILNSYIYFGVFCAVVLLPLLLITHYFLTKLDFHISIVSAVMVTACVFIGYDIFKVY
FT                   TRKIISKKIIQKAWALHFPYFAYEKYSIMAGEIYKEALKEEIPKANLEQYVLDKIIHSK
FT                   "
FT   gene            complement(676513..677451)
FT                   /locus_tag="C1336_000100061"
FT                   /note="C1336_000100061 identified by Glimmer3 with a raw
FT                   score of 12.05."
FT   CDS             complement(676513..677451)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100061"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100061 identified by Glimmer3 with a raw
FT                   score of 12.05. Gene function extrapolated from C8J_0659
FT                   (CP000814.1) after blastn alignment (99.64 percent identity
FT                   over a 276 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31203.1"
FT                   /translation="MLEDDFIKERQNIRQKMLKFSRAINQGKPLDDDLRDEISSDDILR
FT                   RRFKKKTPNKFLEELDEEYESKHTKKSNIYLKEDLINVKLEEKQSLAKKIFSKMKERKK
FT                   EENKKTKKIFSFGRKKINEIKNIQTKPKIQIKNDQNLIQDKKEKKESIKSIEKIQKTEP
FT                   KIQNSQTIEKRPDIKKQPDIKQSLENLQKKITPQENKQELPKPSNQAQEKQQNDEDAQK
FT                   AKNVLLEGYSNATKEDRNLNFNHLLFAALLVSFALFLFAPQIYIRNQIYYLSREIATLR
FT                   TEESVLNEENKDLKRRLENMRFQNQILDYLE"
FT   gene            complement(677451..678383)
FT                   /locus_tag="C1336_000100062"
FT                   /note="C1336_000100062 identified by Glimmer3 with a raw
FT                   score of 10.71."
FT   CDS             complement(677451..678383)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100062"
FT                   /product="S-adenosyl-methyltransferase MraW"
FT                   /note="C1336_000100062 identified by Glimmer3 with a raw
FT                   score of 10.71. Gene function extrapolated from C8J_0660
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 152 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31204.1"
FT                   /translation="MEIPHIPVLLNEVQEIFKNLKTGYFLDCTLGFGGHSEALLKNHPD
FT                   LKFIACDQDQQALEFSKKRLKDFHNRITFIQSNFSEVLEKISHKEELRGILADIGVSSF
FT                   QLDNNERGFSVNSDFLDMRMNQNSKISAYEIINTYTKEQLTSIFKDYGELHDAHFIAEK
FT                   ICLERSKNPIKSAKELYQIIGKGKQNHRKISKATLAFQAIRIEVNQELKVLKDFLGHLE
FT                   NLKPKNCILTIISFHSLEDRIVKNFFKKWSKNCICDEKIMRCECGNNHSLGQIITKKAI
FT                   SASKEELLKNSRSSCAKMRAFYFNNLDNK"
FT   gene            678548..680037
FT                   /locus_tag="C1336_000100103"
FT                   /note="Features C1336_000100063, C1336_000100064 joined to
FT                   form C1336_000100103 to correct 454 sequencing error
FT                   (C1336_000100063 identified by Glimmer3 with a raw score of
FT                   12.81, C1336_000100064 identified by Glimmer3 with a raw
FT                   score of 11.56)."
FT   CDS             join(678548..679147,679147..680037)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100103"
FT                   /product="peptidyl-prolyl cis-trans isomerase D"
FT                   /note="Features C1336_000100063, C1336_000100064 joined to
FT                   form C1336_000100103 to correct 454 sequencing error
FT                   (C1336_000100063 identified by Glimmer3 with a raw score of
FT                   12.81, C1336_000100064 identified by Glimmer3 with a raw
FT                   score of 11.56). Gene function extrapolated from
FT                   CJJ81176_0717 (CP000538.1) after blastn alignment (99.10
FT                   percent identity over a 1112 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31205.1"
FT                   /translation="MLTWMQHHKKYLVVTIWVSTIAFVGAGFLGWGAYDFNLNRSSSVA
FT                   TVGNEKIGFSEFDTRYRQILSYYNQISNGALTPENAEQLGIKNIALSSLVEDKLLLNFA
FT                   KDLGIGVNENEILQKLANTREFQDPTGDFNKTIYYELLNANNLTPKDYETQLANEVITD
FT                   KLNQIFNIPSKDEELKMLASSYFMQDALSIAKIDYDKKNIKINEEDLKKLWNEHKEDYK
FT                   TKKIYEISTYFLPVSNEKIDDKELEKFYNQDENKLKYKDFAGKVMDFQSAKNEVAKDYA
FT                   LMQLKNVANAKFLDLKNGKDNFQKDQNISESDVYYPIDLLNKAKNGDVLRPAPYNNGYI
FT                   IVKLNKVDPIRNKTFEEAREEVLPMYLSEQARKNLEEKAKNSLVNFKGDDIGFVSRDSS
FT                   RESVKLSDKILNDSEFAYFLMNVFNADQNSSYVIINDNKAILYKINKQKLDMNSDKFKQ
FT                   YKTMLEQNLQNLKANELKQELVDEFKKIYPIKIYYKGN"
FT                   /artificial_location="low-quality sequence region"
FT   gene            680040..681422
FT                   /locus_tag="C1336_000100065"
FT                   /note="C1336_000100065 identified by Glimmer3 with a raw
FT                   score of 13.45."
FT   CDS             680040..681422
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100065"
FT                   /product="cell division protein ftsA"
FT                   /note="C1336_000100065 identified by Glimmer3 with a raw
FT                   score of 13.45. Gene function extrapolated from C8J_0662
FT                   (CP000814.1) after blastn alignment (99.35 percent identity
FT                   over a 1383 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31206.1"
FT                   /translation="MNILGIDLGSTQTCAIIAQKDEDGLKIIGFSKSKTNGVKKGAITN
FT                   IELASKSIEEAVRSAEMMSGVHYDKVVVSISGAYTKSVDSVGVVNIPNHEIGIKEIHRA
FT                   VSTAKHTANLPSGYEIIHVLPYNFKVNDLEHVDDPLGMSGNRLEVSTHIVISQESHIKN
FT                   LKKAVELADLRVDNIVLSGYASAIACLDDSEKELGAVLIDMGGAICDMVVHTGNSIRYN
FT                   DCLQIGSINITQDLSMALHTPLKEAEKIKLNYAALSQQPNTLIQIPSMGDERKVNEVSL
FT                   DIISNVIYARAEETLMILAKILSDNRYANAIGGGVVLTGGMTKLAGIDELAPATFDNRS
FT                   VRLATARKDLITGFSEIFNDPENTCAIGLCLYGAGYFTPYELDSNEKLRYKGEIENFNR
FT                   QIKQDIVLQKDAESEIKSDFFDENLQENDTIAIQEQLDFKEPKEKKPSVFSNIWHKIMN
FT                   QF"
FT   gene            681438..682550
FT                   /locus_tag="C1336_000100066"
FT                   /note="C1336_000100066 identified by Glimmer3 with a raw
FT                   score of 15.55."
FT   CDS             681438..682550
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100066"
FT                   /product="cell division protein ftsZ"
FT                   /note="C1336_000100066 identified by Glimmer3 with a raw
FT                   score of 15.55. Gene function extrapolated from C8J_0663
FT                   (CP000814.1) after blastn alignment (99.01 percent identity
FT                   over a 1113 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31207.1"
FT                   /translation="MSEFLVEEMQHNKGAKIKVIGCGGGGGNMINHMVKMGLNDLDLIA
FT                   ANTDAQAISISLAKTKIQLGEKKTKGLGAGMLPEVGAESARESFEEIKASLSQSDIVFI
FT                   ASGFGGGTGTGATPVIAQAAKEIGALTVSVVTMPFAFEGKQRKKLAESGLLELKKESDS
FT                   ILVIQNEKLLSIIDKKAGIKDAFRLVDDILARAVKGMVSILLDNGDINVDFADVRTIMS
FT                   HRGLALMGVGSASGENAIEEALSNAIESPLLDGMDIKGAKGVILHFKTSSNCSLFEISA
FT                   AANSIQEIVDENAKIIFGSTTDDSMEDRVEVTIIATGFEDKDTVAKKSTEEAQASKKNP
FT                   YLSLKKVSGGYDEEIMAQIETPTFLRRQMD"
FT   gene            682706..683518
FT                   /locus_tag="C1336_000100067"
FT                   /note="C1336_000100067 identified by Glimmer3 with a raw
FT                   score of 11.80."
FT   CDS             682706..683518
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100067"
FT                   /product="flagellar basal-body rod protein"
FT                   /note="C1336_000100067 identified by Glimmer3 with a raw
FT                   score of 11.80. Gene function extrapolated from Cj0697
FT                   (AL111168.1) after blastn alignment (98.89 percent identity
FT                   over a 813 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31208.1"
FT                   /translation="MQNGYYQATGGMVTQFNKLDVITNNLANINTSGYKRDDVVIADFK
FT                   RIFKETQDELPIENHTRDASRFVNTTIDGIPQVSQEYTDFSLGSLKATNNPLDLAMTRE
FT                   DAFYLVQTKDGEVRLTKDGNFQLDDEGYLVNKQGYKVLSSDYFNNPQNAGIRIPNGAVQ
FT                   ISVDKNGSIEVDGVQNARLFVAQVDDIRALQKDGDNVYKIDDLTRIRDLENSNAIRQGF
FT                   SQGSNVNPVTEMVGLIEANRMVEMYQKVMTAHMDDLNQEAINKLAAVK"
FT   gene            683548..684339
FT                   /locus_tag="C1336_000100068"
FT                   /note="C1336_000100068 identified by Glimmer3 with a raw
FT                   score of 12.35."
FT   CDS             683548..684339
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100068"
FT                   /product="flagellar basal-body rod protein"
FT                   /note="C1336_000100068 identified by Glimmer3 with a raw
FT                   score of 12.35. Gene function extrapolated from Cj0698
FT                   (AL111168.1) after blastn alignment (98.99 percent identity
FT                   over a 792 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31209.1"
FT                   /translation="MMRSLHTAATGMVAQQTQIDVTSNNIANVNTAGFKKSRAEFADLM
FT                   YQVMKYAGTSTSATTLSPSGIEVGVGVRPTAVTKVFTEGNLKSTSTDGLDMAIAGNGFF
FT                   QIQLPDGTIGYTRNGQFTKDNEGNIVNSDGYRLLPEMTIPEGATAINVATDGTVSVMLP
FT                   GEQQETQIGQVELVQFINPAGLHSMGDNLYLETGASGAPVAGIAGQDGLGTIRHGFIEL
FT                   SNVQLVEEMTDLITGQRAYEAGSKAITTSDDMLGIVNQLKR"
FT   gene            complement(684406..685836)
FT                   /locus_tag="C1336_000100069"
FT                   /note="C1336_000100069 identified by Glimmer3 with a raw
FT                   score of 10.79."
FT   CDS             complement(684406..685836)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100069"
FT                   /product="glutamine synthetase, type I"
FT                   /note="C1336_000100069 identified by Glimmer3 with a raw
FT                   score of 10.79. Gene function extrapolated from CJE0798
FT                   (CP000025.1) after blastn alignment (98.88 percent identity
FT                   over a 1431 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31210.1"
FT                   /translation="MGKFVNNIDDFFKFCKQNEVLFVDFRFTDMIGTWHHITYNLHAIN
FT                   EKTFQTGIPFDGSSIHGWQPIEKSDMILKPDAQSAFLDPFTADPTIIVFCDVYDIYKGQ
FT                   MYEKCPRSIAKKAMEHLKNSGIADTAYFGPENEFFVFDSVKIVDTTHCSKYEVDTEEGE
FT                   WNDDREFTDSYNTGHRPRNKGGYFPVQPIDSLVDIRSEMVQTLEKVGLKTFVHHHEVAQ
FT                   GQAEIGVNFGTLVEAADNVQIYKYVVKMVAHLNGKTATFMPKPLYGDNGNGMHVHMSLW
FT                   KDGINLFYDKDGYSGLSQTAINYIGGILKNARSVAAFTNPSSNSYKRIVPGFEAPCILT
FT                   YSCQNRSASCRVPYGIGKNSARIEIRFPDSTANPYLAFVSLLMAGLDGIKNKTIPVGPM
FT                   DENLFDLTLDEIREKGIEQLPHTLRGSLEALIRHNSYLKPVMSDIFIDDYQHLKFETQV
FT                   WPVEARPTAYEFKTCYSC"
FT   gene            686035..686730
FT                   /locus_tag="C1336_000100070"
FT                   /note="C1336_000100070 identified by Glimmer3 with a raw
FT                   score of 14.27."
FT   CDS             686035..686730
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100070"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100070 identified by Glimmer3 with a raw
FT                   score of 14.27. Gene function extrapolated from Cj0700
FT                   (AL111168.1) after blastn alignment (99.71 percent identity
FT                   over a 696 bp alignment). Similar to Cj0700."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31211.1"
FT                   /translation="MTQEELDALMNGDVDLDSETEAEIKTEESNTEEDALMLEDVKIAD
FT                   YKPNPSVVWPPPPPNQEHKVVHQLDDVTKDSELKATEMMDKLESINNFFADSESLLKEI
FT                   NKAIEKNIDIFSKLNEKFPNVESFSEALELNNQAKKSSKEIVGNLQSGQDEVMMAMDAM
FT                   QYQDIHRQKIERVINVMRALSRYMSSLFEGKIDDKKRVSSAVHIEGDSTADVVSNDDIE
FT                   ALIASLGQK"
FT   gene            686727..687980
FT                   /locus_tag="C1336_000100071"
FT                   /note="C1336_000100071 identified by Glimmer3 with a raw
FT                   score of 14.21."
FT   CDS             686727..687980
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100071"
FT                   /product="putative protease"
FT                   /note="C1336_000100071 identified by Glimmer3 with a raw
FT                   score of 14.21. Gene function extrapolated from C8J_0668
FT                   (CP000814.1) after blastn alignment (96.73 percent identity
FT                   over a 1254 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31212.1"
FT                   /translation="MIIPEIVAPAGNFTKLKIALAYGADAVYAGVNNFSLRSRTAREFN
FT                   YESFEEAIKYTHERGKKIYVTLNGFHLSSQIEGLKRHILKLREMKPDAFIVASVGTMRL
FT                   VKELAPEISLHVSTQANILNYLDAQVYKDMGAKRVVIARELGLKDAKALKENCDIELEA
FT                   FVHGSMCFAYSGRCLISSVQSGRMSNRGSCANDCRFNYELYAKNPENGTLFRLEEDENG
FT                   THVFNSKDLNLCSYIEKIMQENCISAFKIEGRTKSEYYVALTTRTYKMAIQDVLEGKFE
FT                   SNKYEKEIATLKNRGFTDGYLVSRPLEKTDTQNHNTSIEEGSYQVHAISEDGSFFKCKG
FT                   KIVLNTPYEILAPLGDVIQTCDNELGKIYQKEDKYFIEFKKLIAKNNKEFSEIHSGNEH
FT                   EIQLPSKISALSFLRKEI"
FT   gene            687981..688475
FT                   /locus_tag="C1336_000100072"
FT                   /note="C1336_000100072 identified by Glimmer3 with a raw
FT                   score of 18.78."
FT   CDS             687981..688475
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100072"
FT                   /product="phosphoribosylaminoimidazole carboxylase,
FT                   catalytic subunit"
FT                   /note="C1336_000100072 identified by Glimmer3 with a raw
FT                   score of 18.78. Gene function extrapolated from CJE0802
FT                   (CP000025.1) after blastn alignment (99.55 percent identity
FT                   over a 442 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31213.1"
FT                   /translation="MNFVSILMGSKSDYETMKEAAKTLESFGVKYELIISSAHRSPKRT
FT                   KEYIANAEEKGAKVFIAAAGMAAHLAGAVAAYTTKPVLGVPMSGSNLASMDSLFSTVQM
FT                   PSGIPVGTLAIGKAGAINAAYLAMQILAIYDVDLAQKLKEDRLEKEKKLVSDSKEVEVL
FT                   L"
FT   gene            688485..689021
FT                   /locus_tag="C1336_000100073"
FT                   /note="C1336_000100073 identified by Glimmer3 with a raw
FT                   score of 17.31."
FT   CDS             688485..689021
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100073"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100073 identified by Glimmer3 with a raw
FT                   score of 17.31. Gene function extrapolated from C8J_0670
FT                   (CP000814.1) after blastn alignment (98.32 percent identity
FT                   over a 537 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31214.1"
FT                   /translation="MQTYLELEEFCKLVHLNEDVVKGMMANGALNFKEEEGKIYIEAHQ
FT                   GTFSVVPSAAKSQPAMVNSMTLAGESFVEKTIGTILNLHEKVLDAKDETLEALKNENKF
FT                   LKDALYSMQELYDEDRKTIETLNNELKHAREEIEFLKRKYKLMWSKTAEIFGAKTEPDL
FT                   EMNKNLEKPIENMEQ"
FT   gene            689033..689896
FT                   /locus_tag="C1336_000100074"
FT                   /note="C1336_000100074 identified by Glimmer3 with a raw
FT                   score of 14.83."
FT   CDS             689033..689896
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100074"
FT                   /product="glycyl-tRNA synthetase alpha chain"
FT                   /note="C1336_000100074 identified by Glimmer3 with a raw
FT                   score of 14.83. Gene function extrapolated from Cj0704
FT                   (AL111168.1) after blastn alignment (99.19 percent identity
FT                   over a 864 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31215.1"
FT                   /translation="MTFSQMILNLQNYWQEQGCAIMQPYDMPAGAGTFHPATFLRSLGK
FT                   KPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFDLK
FT                   SHDIRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYGLER
FT                   IAMYLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFENSYK
FT                   ECKNILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKNCAEIYKK
FT                   NLNETE"
FT   gene            689883..690608
FT                   /locus_tag="C1336_000100075"
FT                   /note="C1336_000100075 identified by Glimmer3 with a raw
FT                   score of 10.33."
FT   CDS             689883..690608
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100075"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100075 identified by Glimmer3 with a raw
FT                   score of 10.33. Gene function extrapolated from
FT                   CJJ81176_0728 (CP000538.1) after blastn alignment (98.64
FT                   percent identity over a 295 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein
FT                   TIGR00486' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31216.1"
FT                   /translation="MKLSEIYNFLDQLSPFNTQESWDNSGILLGDKDSEISTVYLSLDI
FT                   DENIIKKASENSLIITHHPLIFKGLKDLYDKTYPRAFVKEMICKNISLISMHTNYDLSH
FT                   LNTYFTKEILGFKISFKDEFLIYVENFMSFEALCDRVKKRLNLQILRVSDCGKKDIKRI
FT                   AICTGSGGDLISKVDADCFLSGDFKYHQALEALSNQISLIDLGHFESERYFSQCLAKDL
FT                   KNLPLQVIITVSKNPFQYF"
FT   gene            690618..691334
FT                   /locus_tag="C1336_000100076"
FT                   /note="C1336_000100076 identified by Glimmer3 with a raw
FT                   score of 13.93."
FT   CDS             690618..691334
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100076"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100076 identified by Glimmer3 with a raw
FT                   score of 13.93. Gene function extrapolated from Cj0706
FT                   (AL111168.1) after blastn alignment (99.67 percent identity
FT                   over a 304 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein Cj0706' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31217.1"
FT                   /translation="MNKYLEQLVLLSKIDQEIDSYEPKIDSINKTLKDAELKIGKINTD
FT                   LEKIDEEIKDIENQKVQNNAHISEFSAKIKDLSKKSGAVKTEKEANALKIEEDIAKEQL
FT                   DAANDEIVRLDKILENKETYKKELEEEKIKQEQNINEIRVSIKSEMEVLEKDRMSVYDK
FT                   KTKLVSEMNQKVLSFYEKIRKWAKNTAVVPVKKQACYGCFMKIYDKTYLSVVKGEEIVT
FT                   CPHCGRILYKEQEEQN"
FT   gene            691331..692486
FT                   /locus_tag="C1336_000100104"
FT                   /note="Features C1336_000100077, C1336_000100078 joined to
FT                   form C1336_000100104 to correct 454 sequencing error
FT                   (C1336_000100077 identified by Glimmer3 with a raw score of
FT                   7.03, C1336_000100078 identified by Glimmer3 with a raw
FT                   score of 16.49)."
FT   CDS             join(691331..691804,691806..692486)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100104"
FT                   /product="3-deoxy-D-manno-octulosonic-acid transferase"
FT                   /note="Features C1336_000100077, C1336_000100078 joined to
FT                   form C1336_000100104 to correct 454 sequencing error
FT                   (C1336_000100077 identified by Glimmer3 with a raw score of
FT                   7.03, C1336_000100078 identified by Glimmer3 with a raw
FT                   score of 16.49). Gene function extrapolated from Cj0707
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 125 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31218.1"
FT                   /translation="MIFFYYFLTWTAFLFCAVFILLLSFLKSKYKISLKSRFFLYKNLH
FT                   QEKADVHFHACSYGEVRSIKALVLKFDSRITTITQTGFECAKEFCKKVNYLAFENFLPF
FT                   WFNPCKVLVIFEAEYWLMLVFMARIYKAKIILLNARISDKSYHSYQKFSFFIKNFSYID
FT                   EVFAQSELDKVRLESLGAKNVKIFKNIKANLEIKNNKIYTKPKEKLIIFASTHKDEEEL
FT                   LLDHFKLEENEKLIIAPRHPERFKEVENLLLNKGLEFEKFSSLKDENKKFSKKILLLDT
FT                   LGELVNFYAISDVVVLGGSFIEGIGGHNPIEVAYFDNVLISGKFIHNQKALFEEVENVY
FT                   FCENLKDLNDKIHYLNLKAKISKKENLDLIMQTIQKGIDARKSL"
FT                   /artificial_location="low-quality sequence region"
FT   gene            692467..693219
FT                   /locus_tag="C1336_000100079"
FT                   /note="C1336_000100079 identified by Glimmer3 with a raw
FT                   score of 15.21."
FT   CDS             692467..693219
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100079"
FT                   /product="RNA pseudouridylate synthase family protein"
FT                   /note="C1336_000100079 identified by Glimmer3 with a raw
FT                   score of 15.21. Gene function extrapolated from C8J_0675
FT                   (CP000814.1) after blastn alignment (98.80 percent identity
FT                   over a 753 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31219.1"
FT                   /translation="MQEKAYKLLALQEKISNREAKDLIDKGCVFSHGKKVVVARALMND
FT                   KARFNVIKTKNPQIIFEDDKIIAINKPYAYVSEDLEKKFNAKLLNRLDKETSGVILLCK
FT                   DEDFRKLCIEEFKKHRVYKSYIAVLDGVLAEEVEVNEPIFTIKAKCGALSKVSKDGLSA
FT                   LSIITPIMLQSKKTLAKIVIQTGRTHQIRVHAKFIKHGVVGDEKYAKISSDRMYLHSYE
FT                   IKIFDYYFKAELDNSFAKVGFEIKNLDF"
FT   gene            693287..694624
FT                   /locus_tag="C1336_000100080"
FT                   /note="C1336_000100080 identified by Glimmer3 with a raw
FT                   score of 15.51."
FT   CDS             693287..694624
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100080"
FT                   /product="signal recognition particle protein"
FT                   /note="C1336_000100080 identified by Glimmer3 with a raw
FT                   score of 15.51. Gene function extrapolated from
FT                   CJJ81176_0732 (CP000538.1) after blastn alignment (98.77
FT                   percent identity over a 893 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31220.1"
FT                   /translation="MFELVSESFKSAINKLRFVDDEKALKNALETLKKALLKADVHHKV
FT                   TKELLTSIEEDVKQNGIGQKQFLNAIKVNLENILSVNGKNQGFVFASKPPTVVLMAGLQ
FT                   GGGKTTSTIKLANYLKLRNKKVLVAACDLQRLAAVEQLRQLCEANEIELFFIENEKDPI
FT                   RVAKEALKKAESSMVDVLLVDTAGRLAIDETLMNELKAVKDVLNPDEIFYVADAMSGQD
FT                   GVKTAASFNEVLGISGVILSKFDADTKGGVALGIAKQIGIPLRFIGVGEKVADLEVFIP
FT                   DRIVSRIMGEGDLATLAEKTAAVIDEKEAKKLNQKIKKGEFNFNDFLNQMESIKKLGSM
FT                   KSLIGMIPGLGGMANAVKDIDLDNSKEIIHIKAMISSMTPKERENPDLLNNARKRRIAE
FT                   GAGLSQVEVNRFLKQFSNAAKLAKRFSGKKGMENLTQMMSQARRQF"
FT   gene            694689..694916
FT                   /locus_tag="C1336_000100081"
FT                   /note="C1336_000100081 identified by Glimmer3 with a raw
FT                   score of 8.64."
FT   CDS             694689..694916
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100081"
FT                   /product="30S ribosomal protein S16"
FT                   /note="C1336_000100081 identified by Glimmer3 with a raw
FT                   score of 8.64. Gene function extrapolated from C8J_0677
FT                   (CP000814.1) after blastn alignment (98.68 percent identity
FT                   over a 228 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31221.1"
FT                   /translation="MTVIRLTRMGRTKRPFYRIVVTDSRKRRDGGWIESIGYYNPMVEP
FT                   EVIKVDAERLAYWKSVGAKLSDKVASITSK"
FT   gene            694919..695161
FT                   /locus_tag="C1336_000100082"
FT                   /note="C1336_000100082 identified by Glimmer3 with a raw
FT                   score of 8.63."
FT   CDS             694919..695161
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100082"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100082 identified by Glimmer3 with a raw
FT                   score of 8.63. Gene function extrapolated from C8J_0678
FT                   (CP000814.1) after blastn alignment (98.35 percent identity
FT                   over a 243 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31222.1"
FT                   /translation="MVENFLREYAKLIADYPEQINTQKIELSENFFEIVLFAHKVDTGK
FT                   LIGKNGKMINAIKTVISAYKSKDASSYRVTVKALE"
FT   gene            695154..695693
FT                   /locus_tag="C1336_000100083"
FT                   /note="C1336_000100083 identified by Glimmer3 with a raw
FT                   score of 7.66."
FT   CDS             695154..695693
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100083"
FT                   /product="putative 16S rRNA processing protein"
FT                   /note="C1336_000100083 identified by Glimmer3 with a raw
FT                   score of 7.66. Gene function extrapolated from C8J_0679
FT                   (CP000814.1) after blastn alignment (96.67 percent identity
FT                   over a 540 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31223.1"
FT                   /translation="MSEKDFVQVAKLGKTVGLKGYVKLHNLSDFSSQFKKDATFFIKNT
FT                   KEILKIKHYNASNSTVLFENYEDIEKAKELTNLILFQSIEKSRQTCKLKKDEFFYFDIL
FT                   ECEVFEEDKRLGKVVDILEIGASYLFEIQSDEKWVNKKYSKIFFVPYLDKFVKNIDIEK
FT                   RQIFCTQDAFLILENS"
FT   gene            695726..696394
FT                   /locus_tag="C1336_000100084"
FT                   /note="C1336_000100084 identified by Glimmer3 with a raw
FT                   score of 11.17."
FT   CDS             695726..696394
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100084"
FT                   /product="tRNA (guanine-N1)-methyltransferase"
FT                   /note="C1336_000100084 identified by Glimmer3 with a raw
FT                   score of 11.17. Gene function extrapolated from
FT                   CJJ81176_0736 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 129 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31224.1"
FT                   /translation="MKFYFQDSILARAKEKKLFKLNFYNPRDFSKNSYHKVDDYKIGGG
FT                   AGLLMQVEPMYEVLKSIQEKKENPYFIFLNPSGKTFNQKDAKRLSKKEHIVFVCGRYEG
FT                   IDERVLEIFANEVFSIGDFILTGGELPALVMCDAILRNVNGVLGNMESLEEESFENNLL
FT                   EAPAFSKPFIFEKKNQKFYTPSEFLKGNHARIASLKTTLASCKTKFFRPDLFLEHERKK
FT                   "
FT   gene            696404..696760
FT                   /locus_tag="C1336_000100085"
FT                   /note="C1336_000100085 identified by Glimmer3 with a raw
FT                   score of 8.78."
FT   CDS             696404..696760
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100085"
FT                   /product="50S ribosomal protein L19"
FT                   /note="C1336_000100085 identified by Glimmer3 with a raw
FT                   score of 8.78. Gene function extrapolated from C8J_0681
FT                   (CP000814.1) after blastn alignment (97.20 percent identity
FT                   over a 357 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31225.1"
FT                   /translation="MKNKYIEQFEAKQIEGKNVPDFRAGDTLKLAIRIKEGDKTRIQNF
FT                   EGICIARRGNGVSETFIVRKMGANNVGVERIFPIYSESLESIIVLRRGRVRRARLFYLR
FT                   DRRGKAARIKELKK"
FT   gene            696893..697306
FT                   /locus_tag="C1336_000100086"
FT                   /note="C1336_000100086 identified by Glimmer3 with a raw
FT                   score of 5.01."
FT   CDS             696893..697306
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100086"
FT                   /product="transthyretin-like periplasmic protein"
FT                   /note="C1336_000100086 identified by Glimmer3 with a raw
FT                   score of 5.01. Gene function extrapolated from C8J_0682
FT                   (CP000814.1) after blastn alignment (98.48 percent identity
FT                   over a 395 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31226.1"
FT                   /translation="MFSIKKTLLILASVPMFLSATEYQLSTHVLDITSGQPAPKVKVEL
FT                   YKLEANQQWKKVSEEFTEENGRIGDLLPYEKAENRAFGIYKLKFFTKDYYTSHKINTFY
FT                   PFVEVSFELSKDQKHYHVPITLSPFGYSTYRGS"
FT   gene            697330..698670
FT                   /locus_tag="C1336_000100087"
FT                   /note="C1336_000100087 identified by Glimmer3 with a raw
FT                   score of 14.20."
FT   CDS             697330..698670
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100087"
FT                   /product="3-deoxy-7-phosphoheptulonate synthase"
FT                   /note="C1336_000100087 identified by Glimmer3 with a raw
FT                   score of 14.20. Gene function extrapolated from C8J_0683
FT                   (CP000814.1) after blastn alignment (97.76 percent identity
FT                   over a 1341 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31227.1"
FT                   /translation="MWTKNSWKNYPIKQQPIYPDQEEMNRVLARLEKLPPLVFAGEVRN
FT                   LQKSLARVCKKEAFLLQGGDCAESFENFGAVNIRDMFKILLQMAIVLTFAGGCPVVKIG
FT                   RIAGQFAKPRSSDFEELNGISLPSYRGDIINGFEFSEQARIPDPHRMLEAYYQSATTLN
FT                   LLRGFAKGGLADLHEVHRWNLRFLKKSELHKQYTDISEKISQALAFMEACGINTSNTPS
FT                   LREVSVYTSHEALLLPYEEALTRVDSLSGEIYDCSAHMLWIGERTRALDEAHVHFLRGV
FT                   KNPLGVKIGPSASADDIIALANVLNPNNEEGRLNIIIRMGADKIINNLPKIFSKLKSEG
FT                   LNLVYSIDPMHGNTVKAGNFKTREFDKIMQEVGSFFEIAISEGIYPGGVHLEMTGKDVT
FT                   ECTGGASNVTAQSLEDRYETQCDPRLNADQALELAFLIADLVKKARK"
FT   gene            698667..698996
FT                   /locus_tag="C1336_000100088"
FT                   /note="C1336_000100088 identified by Glimmer3 with a raw
FT                   score of 8.70."
FT   CDS             698667..698996
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100088"
FT                   /product="putative ArsC family protein"
FT                   /note="C1336_000100088 identified by Glimmer3 with a raw
FT                   score of 8.70. Gene function extrapolated from Cj0717
FT                   (AL111168.1) after blastn alignment (97.73 percent identity
FT                   over a 176 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31228.1"
FT                   /translation="MKLYGIKNCNSVKKAMDALTQKGVVFDFMDIKKINQDILYTWLKQ
FT                   KSFEDLINTAGLTSKKLGLNKEKVKSLNEKELEKIVLENPSCIKRPIIEYEQNIYIGKE
FT                   YEKIL"
FT   gene            699447..703049
FT                   /locus_tag="C1336_000100089"
FT                   /note="C1336_000100089 identified by Glimmer3 with a raw
FT                   score of 14.56."
FT   CDS             699447..703049
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100089"
FT                   /product="DNA polymerase III, alpha chain"
FT                   /note="C1336_000100089 identified by Glimmer3 with a raw
FT                   score of 14.56. Gene function extrapolated from C8J_0685
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 102 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31229.1"
FT                   /translation="MSQFTHLHLHTEYSLLDGANKLKELALTLKEQGATSVAMTDHGNM
FT                   FGAIDFYQTMKAQGLKPIIGMEAYLHNHDELDDKSSRQRFHLCLYAKNEIGYQNLMYLS
FT                   SQSYIKGLYYYPRINKKLLEKYSEGLICSSACLQGEVNWHLNTYSERNVRFGAKGYEAA
FT                   KEAALWYKKVFKDDFYFEIMRHGISDQRMIDDDIIRLSKELNIKIIATNDTHYTFKERA
FT                   AAHEVFMCIAMGKKLNDPDRIRHSVHEFYVKSPEQMSELFADIPEAIENTQEIAQKCNL
FT                   ELNLGNPTPPNFKFTREYAKDHNITLPEETKEFSFDNDDIVFEELCKKGLEERLKFIDE
FT                   SKHKEYKQRLEVEINIIKNMKFSGYMLIVHDFIKVAKDKGIPVGPGRGSAAGSLVSYCL
FT                   RITDLDPIPYSLLFERFLNPERVSMPDIDVDFCQDRRAEVIDYVIDKYGADKVAQVITF
FT                   GKLLAKGVIRDVARVCDMSIQDADELAKLVPEELKITLDAAYEKEPKIKEFIDRHPKGP
FT                   EVWEYARALEGLNRNAGMHAAGVVISNESLWKKTPLFRQSKNDERHLVTQYSKDHLEDV
FT                   DLIKFDFLGLKTLTVINNAIKLIKKRYNKDIIWETIDVNDSKVYKTIQSGNTLGIFQIE
FT                   SDGMQSLNARLKPERFEDIIAVLALYRPGPMESGMLDDFIDRKHGLKSIEYPFDSLEKV
FT                   LEPTYGVIVYQEQVMQIVQIIGGFSLGGADVVRRAMGKKDPEKMKKLKTDFADGAEKQG
FT                   YDRAKAEDLWELIVKFAGYGFNKSHSAAYALITFQTAYLKTYYPSEFMAALLTSEENNV
FT                   DKIAVYIDEMKKMNIKLLPPSINKAIREFSALEQDGNDAIIYGLGAIKSVGIPAVENLL
FT                   EARQDGEFKDINDFLGKIDPTKINRRTLESLIKAGAFDEFGFTRKALFDNMENLSEASR
FT                   KMAEVRKNAASSLFGEEELTSGVQVNFTPKNEEFEVMEKLGYEKEILGIYVSGHPLDRF
FT                   YEQINAIDYVKSLDFESLKNNGEILSIGKIEDFKSMMSKNNKRYGRIEILDYYSSFDAT
FT                   VFESNVEEIENIIKDENLKNNAYGFVLGFKAEGGEKPSFFLKAIKDLQSLEDGEIKAIK
FT                   KFGAKKDFKNKEENHFTAEPKEFEKNIIELDLTRLNRELIYEIHEIARNAHNPNEKNNK
FT                   KLVLKVISAGSCLLYHTDFIISDSIVEEISNKYA"
FT   gene            complement(703062..703694)
FT                   /locus_tag="C1336_000100090"
FT                   /note="C1336_000100090 identified by Glimmer3 with a raw
FT                   score of 11.17."
FT   CDS             complement(703062..703694)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100090"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100090 identified by Glimmer3 with a raw
FT                   score of 11.17. Gene function extrapolated from
FT                   CJJ81176_0742 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 107 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein
FT                   TIGR00044' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31230.1"
FT                   /translation="MTLEQILEKTKNVRLVAASKYVDASIIEKLFDQGIVEFGENQVQA
FT                   LAQKKENLDEKKLDIKWHFIGTLQSNKINLLIKQKPILWHSCNGIKIAKAMDKRLDYKL
FT                   NTLLEINSANENSKSGLDPNQAVEEYLQIQEECSNLNLCGVMSIGSHSQDKESIIKSFE
FT                   TTFKIYEILQKHGAKICSMGMSNDFEIAIKCGSNLVRLGSILFKNLK"
FT   gene            complement(703730..704476)
FT                   /locus_tag="C1336_000100091"
FT                   /note="C1336_000100091 identified by Glimmer3 with a raw
FT                   score of 13.75."
FT   CDS             complement(703730..704476)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100091"
FT                   /product="flagellin"
FT                   /note="C1336_000100091 identified by Glimmer3 with a raw
FT                   score of 13.75. Gene function extrapolated from Cj0720c
FT                   (AL111168.1) after blastn alignment (98.26 percent identity
FT                   over a 747 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31231.1"
FT                   /translation="MISDATMMQQNYYLNNAQKASDKALENIAAVRAISGVDSANLAIA
FT                   DSLRSQSSTIDQGIANAYDAIGVLQIADASLTNISQSADRLNELSVKMNNAALNDSQKG
FT                   MLRTEATRIQESINDSFNNATYNGKNVFQTMNFVVGSGTETTNLNPLATGGLSIDNQDS
FT                   ITNFMDQLGSLRSEIGSGINAITSNINASVQNSINSKAAENNLLNNDIAKNVNDFNANY
FT                   LKENAAAFVAAQSNMQLQSKIANLLQ"
FT   gene            complement(704519..704989)
FT                   /locus_tag="C1336_000100092"
FT                   /note="C1336_000100092 identified by Glimmer3 with a raw
FT                   score of 7.90."
FT   CDS             complement(704519..704989)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100092"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000100092 identified by Glimmer3 with a raw
FT                   score of 7.90. Gene function extrapolated from C8J_0688
FT                   (CP000814.1) after blastn alignment (97.93 percent identity
FT                   over a 145 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31232.1"
FT                   /translation="MKAVNLFLLASIIGVELILGIVVAPTIFFPQNLIGEGVLSHFQSG
FT                   LIMTQIFIKMGYLLIFVSVVNFLYEIYSLIKDEIKFQIKFSKFMLSLLILILSLIFVFY
FT                   FTNTIIELQNLGENATKTQEFISIHNASEVVIKIILIMQVFLYFLSFKIAKK"
FT   gene            complement(705002..705817)
FT                   /locus_tag="C1336_000100093"
FT                   /note="C1336_000100093 identified by Glimmer3 with a raw
FT                   score of 11.78."
FT   CDS             complement(705002..705817)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100093"
FT                   /product="putative DNA methylase"
FT                   /note="C1336_000100093 identified by Glimmer3 with a raw
FT                   score of 11.78. Gene function extrapolated from C8J_0689
FT                   (CP000814.1) after blastn alignment (97.55 percent identity
FT                   over a 816 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31233.1"
FT                   /translation="MTIKNALIEAKSSLKGYENEAVFILCEYLKKDKAWLFLNQDIEID
FT                   HKPYFELIRRFKSGEPFEYIFEKVDFWGLEFKIKKGVLIPRYDSEILLFQILNLCKKNT
FT                   FNKILEIGFGSGILSIVLAKELGLKITACDINPKALELALENAKLHKVDHLIDFKLCNF
FT                   KQIKENYDFIFSNPPYIKNSYPIDIWVQKEPKEALFGGEKGYEILEEIIHFSLDKKVKF
FT                   LACEFGYDQKEILEKILYQNNFIVDFFKDEQGYNRAFIAKFTNMRYDKK"
FT   gene            complement(705814..707002)
FT                   /locus_tag="C1336_000100105"
FT                   /note="Features C1336_000100094, C1336_000100095 joined to
FT                   form C1336_000100105 to correct 454 sequencing error
FT                   (C1336_000100094 identified by Glimmer3 with a raw score of
FT                   12.85, C1336_000100095 identified by Glimmer3 with a raw
FT                   score of 9.62)."
FT   CDS             complement(join(705814..706389,706391..707002))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100105"
FT                   /product="peptidase, M48 family"
FT                   /note="Features C1336_000100094, C1336_000100095 joined to
FT                   form C1336_000100105 to correct 454 sequencing error
FT                   (C1336_000100094 identified by Glimmer3 with a raw score of
FT                   12.85, C1336_000100095 identified by Glimmer3 with a raw
FT                   score of 9.62). Gene function extrapolated from
FT                   JJD26997_1283 (CP000768.1) after blastn alignment (100.00
FT                   percent identity over a 78 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31234.1"
FT                   /translation="MTLIAILCLYTALLSWISYTQIRFLEREKDKQAQILSEKDYQNAA
FT                   DIAIENEKFKLFSNFYNLIINIAWIGFGFLYLKELLISNNTRFENTLFLLSFLIITSIL
FT                   NLPLSIYESFIKDKAHGFSNMTVKLFIKDTVKSLILTLIFGFLILYALLFCYDFFGTFW
FT                   WIVAFIFAFCIIVIINLIYPTLIAPIFNKMEKLNDENLLKKISSLMKQCGFNANGVYVI
FT                   DASKRDKRLNAYFGGLFKSKRVVLFDTLLKALNERELLAVLGHELGHFVHKDIIKALFN
FT                   GAITMFLLFFVFANLPEFVYLESHLEGVNGGVFALLFIFANIFSFLISPILNALSRKNE
FT                   FAADQHGAKVTSKEDMKNALIALARENKAFIKTSKIYTFFYLSHPSISDRIKALS"
FT                   /artificial_location="low-quality sequence region"
FT   gene            707129..707314
FT                   /locus_tag="C1336_000100096"
FT                   /note="C1336_000100096 identified by Glimmer3 with a raw
FT                   score of 11.03."
FT   CDS             707129..707314
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100096"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000100096 identified by Glimmer3 with a raw
FT                   score of 11.03. Gene function extrapolated from
FT                   CJJ81176_0747 (CP000538.1) after blastn alignment (98.54
FT                   percent identity over a 137 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31235.1"
FT                   /translation="MFFKKKISQKQKEKPKIPINDMILDDRLCKFKNKVQKISKDEASA
FT                   SLLARQLSRLIRANKF"
FT   gene            complement(707311..707853)
FT                   /locus_tag="C1336_000100097"
FT                   /note="C1336_000100097 identified by Glimmer3 with a raw
FT                   score of 12.78."
FT   CDS             complement(707311..707853)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100097"
FT                   /product="molybdenum cofactor biosynthesis protein"
FT                   /note="C1336_000100097 identified by Glimmer3 with a raw
FT                   score of 12.78. Gene function extrapolated from
FT                   CJJ81176_0748 (CP000538.1) after blastn alignment (97.79
FT                   percent identity over a 543 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31236.1"
FT                   /translation="MDTINIGILTLSDRASSGIYEDKATAEIERVLNSYIKNDIIYHKE
FT                   LIPDDYDLIIKKLLYLADEKKCDLIVTSGGTGPALRDVTPEATEAVCDKMMPGFGELMR
FT                   LESLKYVPTAILSRQNAGIRNKSFIINLPGNPKAIKECLEPVFPAIPYCIDLIEGAYIE
FT                   ANDEVIKVFRPKKKCQN"
FT   gene            complement(707874..708857)
FT                   /locus_tag="C1336_000100098"
FT                   /note="C1336_000100098 identified by Glimmer3 with a raw
FT                   score of 12.47."
FT   CDS             complement(707874..708857)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000100098"
FT                   /product="magnesium and cobalt transport protein"
FT                   /note="C1336_000100098 identified by Glimmer3 with a raw
FT                   score of 12.47. Gene function extrapolated from C8J_0693
FT                   (CP000814.1) after blastn alignment (97.87 percent identity
FT                   over a 984 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31237.1"
FT                   /translation="MLYVYIKTQNALVQRINFNLDSQELPQNILWIDLLHPSAAEIAFI
FT                   SSEFNLEFPTKEEREEIELSAKYWEDNATITINAHFLVRDLKSDEEDRNLIKLRTEIVT
FT                   FATAKNILFTIRYNEFSTFEEIQARILASPKNFEDGFDIIDKMFEVRVEKDADLLEWID
FT                   KEARRLRTSVLEKKDEYSYDEMLKDISSLQELNMRVRDSLFDKRRAMTSLLKSDKIDKD
FT                   IKQNLTIVLKDLNSLVEFSVSQLNILDNIQTILASQINIEQNKIIKIFTVATVAMMPPT
FT                   LIGTVYGMNFKFMPELELHYAYPIVLGVMVISIILPLVVFKKKGWL"
FT   gap             708930..711404
FT                   /estimated_length=2475
FT   gap             714441..714540
FT                   /estimated_length=unknown
FT   gene            751581..752600
FT                   /locus_tag="C1336_000830000"
FT                   /note="C1336_000830000 identified by Glimmer3 with a raw
FT                   score of 13.37."
FT   CDS             751581..752600
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830000"
FT                   /product="signal transduction histidine kinase"
FT                   /note="C1336_000830000 identified by Glimmer3 with a raw
FT                   score of 13.37. Gene function extrapolated from C8J_0744
FT                   (CP000814.1) after blastn alignment (98.53 percent identity
FT                   over a 1020 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30045.1"
FT                   /translation="MNESILKSLDSNEKETLQKGLESLIEQTYVIENEYKTLNENYNSL
FT                   RAMVDEIIEVLPSALWILDKEKNIILQNQEALKNPKLLSIISLDKIRDELEFEGRFYAV
FT                   KIIAHNEKTIVSATDISDEKRNERLASMGSVAAHLAHEIRNPIGSISLLASTLFARSEL
FT                   KNKHIVLEIQKAIARVERIVNSTLLFTKGVHINALNFNLLELKEECESAINSYNFTSQI
FT                   DFEISFLNKQICADKALLGLVLQNLIYNAIDAIEESECEKPMIKILASCDNEKICIRVY
FT                   DNGCEIKDEKLVFEAFKTTKLKGNGLGLSLSKEIINAHKGELSFQSDPKNFYFTLPLA"
FT   gene            750699..751571
FT                   /locus_tag="C1336_000830001"
FT                   /note="C1336_000830001 identified by Glimmer3 with a raw
FT                   score of 10.47."
FT   CDS             750699..751571
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000830001 identified by Glimmer3 with a raw
FT                   score of 10.47. Gene function extrapolated from Cj0792
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 73 bp alignment) - for clarity, the
FT                   original product name 'conserved hypothetical protein
FT                   Cj0792' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30046.1"
FT                   /translation="MLYKRKNIKFKNFVDLHKNLSLSKLFDFYSVFEGFEKINILNFED
FT                   DVFTNIERILLDDYLKIKSYFALDETSSYALTLLAKNNRKRFSINRKIQHFKALSTLKY
FT                   LLETGIIKLEYSKEAKKIKDKRQKIKKELRSYVVQDKIIFNNHFTRFFFYFLKPNEKLI
FT                   LQNRYKEVLECIKEKFELYQSFCFEQLSRELLEKKFNINGVQSYWDKNLELDLYYQDEN
FT                   LCFVGEVKFKNKKICKNILNLLKSKAKSLNLTPNYYIIISKNGFSKEFDKICEQNLLLF
FT                   DLNDFKILL"
FT   gene            complement(749389..750657)
FT                   /locus_tag="C1336_000830002"
FT                   /note="C1336_000830002 identified by Glimmer3 with a raw
FT                   score of 10.98."
FT   CDS             complement(749389..750657)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830002"
FT                   /product="aminotransferase, putative"
FT                   /note="C1336_000830002 identified by Glimmer3 with a raw
FT                   score of 10.98. Gene function extrapolated from CJE0882
FT                   (CP000025.1) after blastn alignment (99.77 percent identity
FT                   over a 433 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30047.1"
FT                   /translation="MQISDLKKELILKKGILHFDFTASALALKCVEKEISKILPTYANT
FT                   HSDSSLNSFKTQQIYEQARKDIKKSLSLDENFALIACGTGSSSAIKKFQELIGIYIPPL
FT                   VKERYFTQIDKNTLPLVIVGPYEHHSNELSFREGLCECIRIPLDKNGEIDFDFLEKTLQ
FT                   KNKKRKIIASFSLASNVTGILSDYKRISEMVRKFKGIVAFDASSFIPYKNISCQYYDAL
FT                   FISSHKLIGGIGGSGLLAIKKDLCGNKPSFAAGGTVGYVSRTSQCYLCNEEALEEGGTP
FT                   GILQLIRASLAFKIKDSIGIKNIEKKEEILKDYFFEKLKTIPNLILYAKNLKTRLPIFA
FT                   FNIKGISPFDIAYELSKKYHIETRAGCACAGPYGHDLLGLKDNQKLKTKPGWLRISLHY
FT                   THEKEDIDYFFNALNKTIIKLSH"
FT   gene            748568..749392
FT                   /locus_tag="C1336_000830003"
FT                   /note="C1336_000830003 identified by Glimmer3 with a raw
FT                   score of 12.61."
FT   CDS             748568..749392
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830003"
FT                   /product="formyltetrahydrofolate deformylase"
FT                   /note="C1336_000830003 identified by Glimmer3 with a raw
FT                   score of 12.61. Gene function extrapolated from CJE0881
FT                   (CP000025.1) after blastn alignment (98.67 percent identity
FT                   over a 825 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30048.1"
FT                   /translation="MISVLKICTKDQKGLIYRISDVIFKYHINIVKNDEFVGEGMFFFR
FT                   ALLEGEFDKEAFIGTLEAMLGQEALIELCEKRKKDIVVFATKESHCLGDLLIKHYSNEL
FT                   EANIKAVISNHNSLKDLVEKFEIPYHFISAENLDRKEQENQILKCLEQYKFDYLVLAKY
FT                   MRILSPDFVKHFEGRIINIHHSFLPAFIGANPYKQAFERGVKIIGATAHFVNNNLDEGP
FT                   IITQAVSPVNHEFTWQDMQQTGRNIEKDVLSKALDLAFEDRIFIYNNKTIIF"
FT   gene            747492..748571
FT                   /locus_tag="C1336_000830004"
FT                   /note="C1336_000830004 identified by Glimmer3 with a raw
FT                   score of 11.94."
FT   CDS             747492..748571
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830004"
FT                   /product="putative multifunctional Cca protein"
FT                   /note="C1336_000830004 identified by Glimmer3 with a raw
FT                   score of 11.94. Gene function extrapolated from Cj0789
FT                   (AL111168.1) after blastn alignment (98.89 percent identity
FT                   over a 271 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30049.1"
FT                   /translation="MQFIAEFLKPYTKRAYLVGGSVRDLFLGLKICDYDIELYDIKPKD
FT                   FEKIMQKLGAQGLGKSFFVHKFKNYDLALARTENKISYGHKGFEVQICNDEKLGAKRRD
FT                   FTINSMMINLFNDEFLDFYGGLKDLGTGFLRHIDKQSFQEDSLRVLRAVVFASRFNFKI
FT                   TSESLKLMQSMDITDLSKDRINAELYKFFKSPRLDVGYRYLQELDLEKQIFGFESVFKS
FT                   LEFQNLLRQSREFVKSDALFLYLYLNFFNLEKDIFFKRTKLKKEYLKYANQAFYLDDIS
FT                   DFELAKIAFEMPLKEWLGLWSKKRIEQAKRLRLYENKFESKILAKDFINAGFCGKILGL
FT                   KIQEARENELKEYIKGLAK"
FT   gene            746993..747484
FT                   /locus_tag="C1336_000830005"
FT                   /note="C1336_000830005 identified by Glimmer3 with a raw
FT                   score of 15.78."
FT   CDS             746993..747484
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830005"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000830005 identified by Glimmer3 with a raw
FT                   score of 15.78. Gene function extrapolated from CJE0879
FT                   (CP000025.1) after blastn alignment (99.55 percent identity
FT                   over a 222 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30050.1"
FT                   /translation="MNLEDLAKKTISEVSSIMEEQRRQNEILKEQELSRKTEIKDELPP
FT                   MEFVCEEFDTPQDLEDKISMAKFEEEQKIQNNIEISTQENKEFKKEEPFLQSEILNPSV
FT                   MTEVQTLNEDIFLKHLRERILVLFEGLNSIKKDNLENRLNLTINFLEFLLANIEDKLKK
FT                   "
FT   gene            746751..746996
FT                   /locus_tag="C1336_000830006"
FT                   /note="C1336_000830006 identified by Glimmer3 with a raw
FT                   score of 9.65."
FT   CDS             746751..746996
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830006"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000830006 identified by Glimmer3 with a raw
FT                   score of 9.65. Gene function extrapolated from Cj0787
FT                   (AL111168.1) after blastn alignment (99.19 percent identity
FT                   over a 246 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein Cj0787' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30051.1"
FT                   /translation="MKNTVTEASIYEAQGLKDEALEIYKNILKEDPDNQNAIDAVRRLS
FT                   GFRSKHKDLNTQMLDFFINMKSDEEINEFKRWLIKI"
FT   gene            746497..746646
FT                   /locus_tag="C1336_000830007"
FT                   /note="C1336_000830007 identified by Glimmer3 with a raw
FT                   score of 9.57."
FT   CDS             746497..746646
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830007"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000830007 identified by Glimmer3 with a raw
FT                   score of 9.57. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30052.1"
FT                   /translation="MVFLIPLLIIIGVIFGIDYVYFKNQDLKAQVKKEQKELNSSLEKE
FT                   KKNI"
FT   gene            746149..746487
FT                   /locus_tag="C1336_000830008"
FT                   /note="C1336_000830008 identified by Glimmer3 with a raw
FT                   score of 12.58."
FT   CDS             746149..746487
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830008"
FT                   /product="napD protein"
FT                   /note="C1336_000830008 identified by Glimmer3 with a raw
FT                   score of 12.58. Gene function extrapolated from
FT                   CJJ81176_0806 (CP000538.1) after blastn alignment (99.12
FT                   percent identity over a 339 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30053.1"
FT                   /translation="MNNLSSVLILAKEEYINDLKKAISEIPFCSVELCENEKIIVVIES
FT                   ENLEDELNSYKMLEKLPNIISINMVFSYQDLNDDIQKAINSGAIETIEKNENAENVRYY
FT                   GSVFNQFS"
FT   gene            745242..746156
FT                   /locus_tag="C1336_000830009"
FT                   /note="C1336_000830009 identified by Glimmer3 with a raw
FT                   score of 12.84."
FT   CDS             745242..746156
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830009"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000830009 identified by Glimmer3 with a raw
FT                   score of 12.84. Gene function extrapolated from C8J_0735
FT                   (CP000814.1) after blastn alignment (98.69 percent identity
FT                   over a 383 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30054.1"
FT                   /translation="MKKFLFILSLFCVLSYAYELKLNANITALKLDKQNLYIGTDKGEI
FT                   LQYNIKDKSLKELLSLPKIKNYYGDDFAKIYNIDVFKHTLLILSEGDFGAKNLSFYKEN
FT                   LQIKKLEENSIIKAFFINENTYLLISIGSEIELIDKSLKNIKKFNFSHSSLNDAVLNED
FT                   KSMLVAGFESGEVELFDLKNWKMLKNYDKMHKDNIYQVDFKNNVILSCGTDRRIGVVKN
FT                   EEQNFLQKDFLIYTCALSPNGELAVYSDNEAGVSEVFSTSDFKPVKTFNNENLMSEFII
FT                   FLNNKDFIVSGFGDSIMFRSIDE"
FT   gene            744716..745237
FT                   /locus_tag="C1336_000830010"
FT                   /note="C1336_000830010 identified by Glimmer3 with a raw
FT                   score of 11.57."
FT   CDS             744716..745237
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830010"
FT                   /product="periplasmic nitrate reductase small subunit
FT                   (cytochrome C-type protein)"
FT                   /note="C1336_000830010 identified by Glimmer3 with a raw
FT                   score of 11.57. Gene function extrapolated from Cj0783
FT                   (AL111168.1) after blastn alignment (99.23 percent identity
FT                   over a 522 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30055.1"
FT                   /translation="MKKKLVLLGSAAVVFFAACAMNSGVSSEQIGLRKASLENENKVNL
FT                   VEANFTTLQPGESTRFERSYENAPPLIPHAIEDLLPITKDNNMCLSCHDKAIAADAGAT
FT                   PLPASHYYDFRHNKTTGDMISDSRFNCTQCHVPQSDAKPLVGNSFKPEFKNEQLKSRSN
FT                   LIDVINEGVK"
FT   gene            743937..744716
FT                   /locus_tag="C1336_000830011"
FT                   /note="C1336_000830011 identified by Glimmer3 with a raw
FT                   score of 9.34."
FT   CDS             743937..744716
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830011"
FT                   /product="ferredoxin-type protein NapH"
FT                   /note="C1336_000830011 identified by Glimmer3 with a raw
FT                   score of 9.34. Gene function extrapolated from CJE0873
FT                   (CP000025.1) after blastn alignment (99.26 percent identity
FT                   over a 270 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30056.1"
FT                   /translation="MKYLIARRIVQLGILALFSFKATDFILQGNLSSSRLFNTIPLSDP
FT                   FAVLQIILASWSIDLMALIGALIIFFIYGLLLGRVFCSWVCPVNLITDFAAFVRNKLTL
FT                   NNKFLILPKNLRYFVLVLILILSFVFSLPVFESFSYIGMIHRGIIFATSSWIFVAFILF
FT                   CIDTFLSPRAICSHFCPLGAFYAFISRFALLKIKHDSDKCTKCYECIRICPEKQVLWMV
FT                   GKESASVKSGECIRCARCIEVCNDDALNFNIFDLRNK"
FT   gene            743266..743937
FT                   /locus_tag="C1336_000830012"
FT                   /note="C1336_000830012 identified by Glimmer3 with a raw
FT                   score of 14.46."
FT   CDS             743266..743937
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830012"
FT                   /product="ferredoxin-type protein NapG"
FT                   /note="C1336_000830012 identified by Glimmer3 with a raw
FT                   score of 14.46. Gene function extrapolated from CJE0872
FT                   (CP000025.1) after blastn alignment (97.77 percent identity
FT                   over a 672 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30057.1"
FT                   /translation="MVNLALKADDNYALRPPGAEDEARFLSKCIRCGLCVKACPYDTLK
FT                   LASLLDSPKNGTPFFRAREIPCYLCKDIPCIRECPTDALDKKHLEQGIESLKMGIAIVD
FT                   SASCVAHWGIQCDACYRACPLIDRALKLELKRNERTAKHAFLLPSVDHEVCVGCGLCEL
FT                   ACITEKPAIRVLPREYVLGKAGSHYVKGWDEKDEGRIKNADTSKHFNAKKATNYLNDGE
FT                   L"
FT   gene            740404..743178
FT                   /locus_tag="C1336_000830013"
FT                   /note="C1336_000830013 identified by Glimmer3 with a raw
FT                   score of 14.09."
FT   CDS             740404..743178
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830013"
FT                   /product="periplasmic nitrate reductase"
FT                   /note="C1336_000830013 identified by Glimmer3 with a raw
FT                   score of 14.09. Gene function extrapolated from Cj0780
FT                   (AL111168.1) after blastn alignment (98.68 percent identity
FT                   over a 909 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30058.1"
FT                   /translation="MNRRDFIKNTAIASAASVAGLSVPSSMLGAQEEDWKWDKAVCRFC
FT                   GTGCGIMIARKDGKIVATKGDPAAPVNRGLNCIKGYFNAKIMYGEDRLVMPLLRMNEKG
FT                   EFDKKGKFQQVSWQRAFDEMEKQFKKAYNELGVTGIGIFGSGQYTIQEGYAALKLAKAG
FT                   FRTNNIDPNARHCMASAVVGFMQTFGVDEPSGCYDDIELTDTIITWGANMAEMHPILWS
FT                   RVSDRKLSNLDKVKVVNLSTFSNRTSNIADIEIIFKPNTDLAIWNYIAREIVYNHPEAM
FT                   DMKFIKDHCVFATGYADIGYGMRNNPNHPKFKESEKDTVEKENVITLDDEEATSLSYLG
FT                   VKAGDKFEMKHQGVADKNWEISFEEFKKGLAPYTLEYTAKVAKGDDNESLEDFKKKLQE
FT                   LANLYIEKNRKVVSFWTMGFNQHTRGSWVNEQAYMVHFLLGKQAKPGSGAFSLTGQPSA
FT                   CGTAREVGTFSHRLPADMVVANPKHREISEKIWKVPAKTINPKPGSPYLNIMRDLEDGK
FT                   IKFAWVQVNNPWQNTANANHWIAAAREMDNFIVVSDCYPGISAKVADLILPSAMIYEKW
FT                   GAYGNAERRTQHWKQQVLPVGAAMSDTWQILEFAKRFKLKEVWKEQKVDNKLTLPSVLE
FT                   EAKAMGYSEDDTLFDVLFANKEAKSFNPNDAIAKGFDNTDVKGDERKIQGSDGKEFTGY
FT                   GFFVQKYLWEEYRKFGLGHGHDLADFDTYHKVRGLRWPVVNGKETQWRFNTKFDYYAKK
FT                   AAPNSDFAFYGDFNKMLTNGDLIAPKDEKEHSIKNKAKIFFRPFMKAPERPSKEYPFWL
FT                   ATGRVLEHWHSGTMTMRVPELYRAVPEALCYMSEKDGEKLGLNQGDLVWVESRRGKVKA
FT                   RVDMRGRNKPPVGLVYVPWFDENVYINKVTLDATCPLSKQTDFKKCAVKIYKA"
FT   gene            739653..740180
FT                   /locus_tag="C1336_000830014"
FT                   /note="C1336_000830014 identified by Glimmer3 with a raw
FT                   score of 16.02."
FT   CDS             739653..740180
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830014"
FT                   /product="thiol peroxidase"
FT                   /note="C1336_000830014 identified by Glimmer3 with a raw
FT                   score of 16.02. Gene function extrapolated from C8J_0730
FT                   (CP000814.1) after blastn alignment (99.05 percent identity
FT                   over a 528 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30059.1"
FT                   /translation="MSTVNFKGNPVKLKGNSVEVGADAPKVNLKAKDLSVIEIGAAGKT
FT                   QIILSVPSLDTPVCATEAREFNKKVASYNGAEVIVVSMDLPFAMGRFCSTEGIENLSVA
FT                   SDFVAKEFGEKYGVLINEGALEGLLARAVFVIKEGKVAYKELVNEITEMPDIAKLDAFF
FT                   GGSSCCGGCGCH"
FT   gene            738815..739555
FT                   /locus_tag="C1336_000830015"
FT                   /note="C1336_000830015 identified by Glimmer3 with a raw
FT                   score of 18.37."
FT   CDS             738815..739555
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830015"
FT                   /product="major antigenic peptide PEB2"
FT                   /note="C1336_000830015 identified by Glimmer3 with a raw
FT                   score of 18.37. Gene function extrapolated from C8J_0729
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 146 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30060.1"
FT                   /translation="MKKILILSLVAASFLNAEILVYGPGGPAPVLKELALKFEEKTKEK
FT                   VIVTAGPTPAWIDKAKENADLIFSGNTSMMDDFAKKIPSLSLENLSVLNMRPSGIIVRP
FT                   NNPKNIKNFEDILKDGVNVMVVDGAGQVGLYEDMALKSVKRENLVKLRKNIKIYAKNSK
FT                   AAVDEWNNNPNIDALIIWSHWAKALGDDKALFIKDKNAVIYRAAEIAPTKKGLENKKAL
FT                   EFVDFIKSKEAQKVWKKYTWKEVK"
FT   gene            736737..738767
FT                   /locus_tag="C1336_000830016"
FT                   /note="C1336_000830016 identified by Glimmer3 with a raw
FT                   score of 14.12."
FT   CDS             736737..738767
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830016"
FT                   /product="putative ATP-dependent DNA helicase"
FT                   /note="C1336_000830016 identified by Glimmer3 with a raw
FT                   score of 14.12. Gene function extrapolated from Cj0777
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 68 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30061.1"
FT                   /translation="MPLSKLNNEQYLAATADFGHNLVIASAGTGKTSTIVARISYLLSK
FT                   GVAPQKIMLLTFTNKASKEMIGRLGKFFDKNITSKILAGTFHSTAYTLLRNADKNIILK
FT                   QASELKTLLKSVYEKRTFRHLSDIKPYQSSYLYDLYSLFQNKAHNQDFYTWFCQNYEDQ
FT                   SIYAEIYEDILKEYDNEKKRFNYVDFNDLLINLKELLKEEKYEFDEILVDEYQDTNTLQ
FT                   SSLIEAFHSKSLFCVGDYDQSIYAFNGADINIIGGFKDRFKDAKIFSLNKNYRSSRSIL
FT                   ALANKVILNNERLYPKELIVTRNDEFKAPSLLTFEELFDQYQNIAKMILTSGVSLEEIA
FT                   VIFRNNSSADGVEVALREQGIASVRKGSGSFFESLEVKAFSSMLALVVNPKDIMAFIHL
FT                   VQYTKGVGGVLAKEIFDALLKLGHGSLIKGFLDPDKNVNLQNHQKRNYQLGLFADLEEL
FT                   ASETRFKFESEFDAHPILRLSKINDLCARNLEKIYLFLKKAMEIKHSLALVNLICENSF
FT                   YREICEELATKRATNKAGQVDLLRKSENLEKIETKFNVLKELTKNYSDIYKYYNFLTLG
FT                   ASEMSSGKGVNLLSVHASKGLEFDLVFVIDLAQGRFPNQKLMGMGGSLEEERRLFYVAV
FT                   TRAKNILYLSYAKYDKNKKTSFAPSRFLIEAGLCKGELTID"
FT   gene            complement(735590..736609)
FT                   /locus_tag="C1336_000830017"
FT                   /note="C1336_000830017 identified by Glimmer3 with a raw
FT                   score of 8.58."
FT   CDS             complement(735590..736609)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830017"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000830017 identified by Glimmer3 with a raw
FT                   score of 8.58. Gene function extrapolated from Cj0776c
FT                   (AL111168.1) after blastn alignment (98.67 percent identity
FT                   over a 528 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30062.1"
FT                   /translation="MNLKIFSIIVGILIAIIVILGGTYYYLFEYSKPKNYTLNTNTYTE
FT                   QKSYTNNYDNSYSPSIQTNNSSSDININNNTIQKQETNPLDENQSLNNNTFNTPISENN
FT                   QSLNNDTNTSNNINTNENKQILDTDKEKLKQENKQAKIEALKKEISKQQKILERERAVK
FT                   KELQSNKSNKNKYLNTAREYLSIGKNSRLEPELSTENMKVYILDGKFLSQYRINLLKDM
FT                   LSVIQDNAKDYYLSIFVKMLPKGEMKLTIYNKEIIFSDMKKAYKYISLDRLSPYLNNPK
FT                   ELNEHVAREEILERLKLQIKKDGKGSDFSKHIKSLKTGLNTAQYFFPFCEIIEISSIK"
FT   gene            complement(732955..735567)
FT                   /locus_tag="C1336_000830018"
FT                   /note="C1336_000830018 identified by Glimmer3 with a raw
FT                   score of 13.31."
FT   CDS             complement(732955..735567)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830018"
FT                   /product="valyl-tRNA synthetase"
FT                   /note="C1336_000830018 identified by Glimmer3 with a raw
FT                   score of 13.31. Gene function extrapolated from
FT                   CJJ81176_0796 (CP000538.1) after blastn alignment (99.09
FT                   percent identity over a 330 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30063.1"
FT                   /translation="MYDKNLEKEYYQICEERGYFEIDGNKTIQEKDKNFCIMMPPPNVT
FT                   GVLHIGHALTFTLQDIMTRYKRMDGYKVLYQPGLDHAGIATQNVVEKQLLAQGIKKEEL
FT                   GREKFIEKVWEWKEQSGGKILDQMRTLGITPAWSRLRFTMDEGLVNAVKKAFVELYDKR
FT                   LIVRGNYMINWCTHDGALSDIEVEYKENKGKLYHIKYFLKDSDEFLVVATTRPETFFGD
FT                   TAVMVHPDDERYTKFVGKEVILPISKKAIKIIADEHVEKEFGTGVVKVTPAHDMNDYEV
FT                   GLRHNLEFISVFNEKGILNEHCLEFQGLERLEAREKIVAKLESLGFIEKIEEHNNQVGY
FT                   CYRCNNVVEPYISKQWFVKKEIAQESIEKVALGESKFYPNHWINSFNAWMKDLRDWCIS
FT                   RQLWWGHQIPVYYCECSHEWASQHTPKTCPKCQSQNFKQDEDVLDTWFSSGLWAMSTLG
FT                   WGNENWGKDKIWSEKDLKDFYPNSLLITGFDILFFWVARMMFQSTNALHQLPFKDIYLH
FT                   ALVKDEQGRKMSKSLGNVIDPNESIKEYSADILRFTLALLAIQGRDIKLSNDKLLQVRN
FT                   FTNKIYNATNYLLLNESKFEDLENITLHSELAKYIYAKFQTCVKDVRENLDNYRFNDAA
FT                   NTLYKFFWDDFCDWGIELSKAEKSSVKELGSIFKEALKLLNPFMPFISEYLYHKLSDTE
FT                   LKTSPSIMISKYPKFKEQDKNIEKIFSLLIESIVGIRRAKSLIDLGNSKIEKAYIKFND
FT                   KKIKNEIKAYMNFIMMLAKCEQIEFSEEKLPKAICDVSENLEIFITLENVDLSGILTRL
FT                   ENQKNKLEKESFKLNSMLSNEKFIANAPKEVVEQNKEVLENLKIQLEKISVELQNLRG"
FT   gene            complement(731940..732950)
FT                   /locus_tag="C1336_000830019"
FT                   /note="C1336_000830019 identified by Glimmer3 with a raw
FT                   score of 12.34."
FT   CDS             complement(731940..732950)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830019"
FT                   /product="ABC transporter, ATP-binding protein"
FT                   /note="C1336_000830019 identified by Glimmer3 with a raw
FT                   score of 12.34. Gene function extrapolated from CJE0865
FT                   (CP000025.1) after blastn alignment (97.36 percent identity
FT                   over a 984 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30064.1"
FT                   /translation="MIKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLLR
FT                   CINGLENYQEGSLKVFDQEIKDLSQKKSKELRVLRKDIGMIFQNFALMERKNVFENVAM
FT                   PLRTHYTQCKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQRVA
FT                   IARALALNPKILLSDEATSALDPNTTKNILELISKINTEFGITVVLVTHEMDVVKDMAQ
FT                   KALLLEHGQIIGSGAIDELFLRPNDKMKEFLGESDFLPEHGLNIKLYFPKEVAQNSVIT
FT                   HMARTLNIDFNIVWGKIEKLNGKALGNLVININEKDKDKVLDYIEKSGVLWEVAS"
FT   gene            complement(731032..731943)
FT                   /locus_tag="C1336_000830020"
FT                   /note="C1336_000830020 identified by Glimmer3 with a raw
FT                   score of 10.24."
FT   CDS             complement(731032..731943)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830020"
FT                   /product="putative ABC transport system permease protein"
FT                   /note="C1336_000830020 identified by Glimmer3 with a raw
FT                   score of 10.24. Gene function extrapolated from C8J_0724
FT                   (CP000814.1) after blastn alignment (98.46 percent identity
FT                   over a 912 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30065.1"
FT                   /translation="MNEENISIISAFFSRISQFFNEFSWQDIKEVSLSSITSFSENYEN
FT                   ILKPALNETIYMSLMAVLFGFLLAIIPGILLAIWDKNGIKENKIAYSILDFITNILRAF
FT                   PFLILIVVLLPLSKIIVGTSIGTNAAIVPLAIGIAPYLAKMLESAFKEIDKGIIEAAKS
FT                   YGASNIQIIFKVIFSEALPAIISGITLTLIFTIGFSALAGTVGGGGLGDVAIRYGYERF
FT                   NKEVMIQTVVILLILVQLVQILGNLFYTWAKNSKTTYIIATLLILLGVSIVININNDEN
FT                   FFWQVIVFILFLGSLLYKGFKK"
FT   gene            complement(730066..730839)
FT                   /locus_tag="C1336_000830021"
FT                   /note="C1336_000830021 identified by Glimmer3 with a raw
FT                   score of 14.50."
FT   CDS             complement(730066..730839)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830021"
FT                   /product="putative ABC transport system substrate-binding
FT                   protein"
FT                   /note="C1336_000830021 identified by Glimmer3 with a raw
FT                   score of 14.50. Gene function extrapolated from C8J_0723
FT                   (CP000814.1) after blastn alignment (98.58 percent identity
FT                   over a 774 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30066.1"
FT                   /translation="MKIKSLFIASILTLSLNANALETITVAATPVPHAEILEQTKPDLE
FT                   KQGYKLEIKEFTDYVLPNLAVDNGEADANFFQHTPYLEEFNKNKGTKLIKVAAIHIEPM
FT                   AVYSKKYKSLDDIKEGVKIAIPNDPTNESRALDIIAKKGLVKFKDKALKTPLDIIDNPK
FT                   KIKFVELKPAQLPRALDDVDFAVINSNYALSANLNPAKDSVFIEDKESPYANILVVRVG
FT                   HENDPKIKALIQALQSDKIKQFIIEKYNGSVLPAF"
FT   gene            complement(729248..730018)
FT                   /locus_tag="C1336_000830022"
FT                   /note="C1336_000830022 identified by Glimmer3 with a raw
FT                   score of 13.41."
FT   CDS             complement(729248..730018)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830022"
FT                   /product="lipoprotein, NLPA family"
FT                   /note="C1336_000830022 identified by Glimmer3 with a raw
FT                   score of 13.41. Gene function extrapolated from CJE0862
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 106 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30067.1"
FT                   /translation="MNLFKIIILACILNLSSLFAQNITIGATPNPFGSLLELMKDDFKN
FT                   KGYELKIVEFSDYILPNRALEEKELDANLYQHKPFLEEYNLKKGSNLIATTPVLIAPVG
FT                   VYSKKIKNLENLKEGARVAIPNDATNESRALELLEKAKLIELNKNTLKTPLDINKNPKK
FT                   LKFIELKAAQLPRALDDVDIAIINSNFALGADLNPSKDTIFREDKNSPYVNYVVVRSED
FT                   KNSEKTKVIDEILRSDKFKAIINEHYKDILIPAF"
FT   gene            complement(728461..728928)
FT                   /locus_tag="C1336_000830023"
FT                   /note="C1336_000830023 identified by Glimmer3 with a raw
FT                   score of 15.27."
FT   CDS             complement(728461..728928)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830023"
FT                   /product="lipoprotein, NLPA family"
FT                   /note="C1336_000830023 identified by Glimmer3 with a raw
FT                   score of 15.27. Gene function extrapolated from CJE0861
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 128 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30068.1"
FT                   /translation="MAIYSNSIKDIKDIPNGAKIAIPNDATNESRALDLLAKANLIEFK
FT                   SQNTLKTPIDISKNPKNLKFIELKAAQLPRALNDTDLAVITTNYALGAGLNPLKDGIFI
FT                   EDKDSLYAIVLATRKGEETSQKSLVIKEILTSNKIKNFIIEKYKGSVIPTF"
FT   gene            complement(727715..728377)
FT                   /locus_tag="C1336_000830024"
FT                   /note="C1336_000830024 identified by Glimmer3 with a raw
FT                   score of 12.39."
FT   CDS             complement(727715..728377)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830024"
FT                   /product="flagellar basal-body P-ring formation protein
FT                   FlgA, putative"
FT                   /note="C1336_000830024 identified by Glimmer3 with a raw
FT                   score of 12.39. Gene function extrapolated from
FT                   CJJ81176_0790 (CP000538.1) after blastn alignment (99.53
FT                   percent identity over a 636 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30069.1"
FT                   /translation="MKIIFLTFFIVINYIQAASLEEIKTALTKEFRNNFPKIIISQIDL
FT                   KITSLPKDFDQYEFLRIANGRFNQAQGFLRAEFKTPQNIQKNVFFRYFIQANLEVLKSE
FT                   RAIKRGDKLGAFDYKSVLIDFDKVPLNALTLDDVDNLVAKSNINKNAILRANMFKTTAL
FT                   IRRNDPIIGVLSEANVDVLIELVALQSANMGERIRAKNKEGKVMQGIVVGKNRMIIQ"
FT   gene            complement(727155..727718)
FT                   /locus_tag="C1336_000830025"
FT                   /note="C1336_000830025 identified by Glimmer3 with a raw
FT                   score of 14.59."
FT   CDS             complement(727155..727718)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830025"
FT                   /product="3-octaprenyl-4-hydroxybenzoate carboxy-lyase,
FT                   putative"
FT                   /note="C1336_000830025 identified by Glimmer3 with a raw
FT                   score of 14.59. Gene function extrapolated from
FT                   CJJ81176_0789 (CP000538.1) after blastn alignment (99.11
FT                   percent identity over a 564 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30070.1"
FT                   /translation="MKVLLGISGSSSVNLGLKLLKNLENQCELYCILTQGAKLSFKAEN
FT                   EANLEEICQENFKYTHFLDDKNLSLSVASGSFGIEKTIIAPCSISSLAKIHAGFADTLL
FT                   MRAAAVALKERKKLILGVREMPFSTLNLEHMLKLSQIGVIIAPPIIASYSKANNLEQME
FT                   NFIVGKWLDLLEIKHNLYEKWQNF"
FT   gene            complement(726639..727115)
FT                   /locus_tag="C1336_000830026"
FT                   /note="C1336_000830026 identified by Glimmer3 with a raw
FT                   score of 9.59."
FT   CDS             complement(726639..727115)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830026"
FT                   /product="posphopantetheine adenylyltransferase"
FT                   /note="C1336_000830026 identified by Glimmer3 with a raw
FT                   score of 9.59. Gene function extrapolated from
FT                   CJJ81176_0788 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 477 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30071.1"
FT                   /translation="MTCLYPGTFDPITNGHLDVIKRALKIFDEVIVAIAKSEHKKPCYD
FT                   LEKRKELALLATQNLKNVKIIAFDNLLVDLAKELKVNTIIRGLRAVSDFEYELQIGYAN
FT                   HALWEDMETIYLMPSLKHAFISSSIVRSIVAHGGDVSSLVPKEILPFLKDQSCM"
FT   gene            complement(726070..726648)
FT                   /locus_tag="C1336_000830027"
FT                   /note="C1336_000830027 identified by Glimmer3 with a raw
FT                   score of 11.79."
FT   CDS             complement(726070..726648)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830027"
FT                   /product="thymidylate kinase"
FT                   /note="C1336_000830027 identified by Glimmer3 with a raw
FT                   score of 11.79. Gene function extrapolated from
FT                   CJJ81176_0787 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 290 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30072.1"
FT                   /translation="MYVVFEGIDCVGKSTQISLLKEIYKDAIFTLEPGGTELGKHLREI
FT                   LLNKTHPINKRAELLLFLADRAQHFEEILKINQNKLIISDRSFISGMAYAKDFENDLLF
FT                   ALNSFALENFFPQKIIFLKGDANLIQERLSQKELDSIEKRGIEYFLSVQDKLEKVLHFL
FT                   KEKISIEILTLDAKESKEKLHQQIKEFLQ"
FT   gene            complement(724847..726073)
FT                   /locus_tag="C1336_000830028"
FT                   /note="C1336_000830028 identified by Glimmer3 with a raw
FT                   score of 15.03."
FT   CDS             complement(724847..726073)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830028"
FT                   /product="histidyl-tRNA synthetase"
FT                   /note="C1336_000830028 identified by Glimmer3 with a raw
FT                   score of 15.03. Gene function extrapolated from
FT                   CJJ81176_0786 (CP000538.1) after blastn alignment (99.91
FT                   percent identity over a 1131 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30073.1"
FT                   /translation="MINALKGMKDLLDKDAYCYEKVIKTCEEVAKNYGFTFINTPHLEL
FT                   YTLFKRSVGESSDIVGKEMYEFIDKGENHVCMRPEGTAGVVRAYIEKKLDKNTSVKRWF
FT                   YHGSMFRYERPQKGRLREFHQFGVESFGNASVYEDASIILMLVEIFSRLDIKFKLLINS
FT                   LGCLKCMPKYRENLIHFLDSKEGFCEDCLRRKNLNPIRVLDCKNEHCQSLLNDAPLLNQ
FT                   NLCSSCQKDFEILQSVLKENGVDFEVDSKLVRGLDYYSKTAFEFISDEIGAKAAIAGGG
FT                   RYDRLIEYLDGKSGFGVGFAMGIERIIAILEQKEEKVQREGIYLCAMDEIYIQKLLHIA
FT                   TNLRKEHKVLLSYEARKLAKHLENADKNNAEIFLCMGENEAQNESLFYKNLAKKEEKMI
FT                   KISDLKKVL"
FT   gene            complement(723015..724847)
FT                   /locus_tag="C1336_000830029"
FT                   /note="C1336_000830029 identified by Glimmer3 with a raw
FT                   score of 10.21."
FT   CDS             complement(723015..724847)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830029"
FT                   /product="arginine decarboxylase"
FT                   /note="C1336_000830029 identified by Glimmer3 with a raw
FT                   score of 10.21. Gene function extrapolated from
FT                   CJJ81176_0785 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 977 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30074.1"
FT                   /translation="MDYGIDIWGNENFIIKNGKVCINHEKKPAIIDIVKELRDDGYKGP
FT                   LLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYN
FT                   YGLEAGSKAELLLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELE
FT                   AIIDIAKERFKPKPNIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKL
FT                   LEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQF
FT                   KNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFS
FT                   QEYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQ
FT                   DRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYLVNFSLFQSIPDFWGLEQN
FT                   FPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDQPLFLHDVDVEKENYFLGFFLVGA
FT                   YQEVLGMKHNLFTHPTEAIISINEKGYEVEGIIEAQSILDALEDLDYDIHAIMDILNER
FT                   ISNSKLVNDKQKKHILGELYLFLNDNGYLKSIGV"
FT   gene            complement(722376..723014)
FT                   /locus_tag="C1336_000830030"
FT                   /note="C1336_000830030 identified by Glimmer3 with a raw
FT                   score of 14.02."
FT   CDS             complement(722376..723014)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830030"
FT                   /product="serine acetyltransferase"
FT                   /note="C1336_000830030 identified by Glimmer3 with a raw
FT                   score of 14.02. Gene function extrapolated from Cj0763c
FT                   (AL111168.1) after blastn alignment (99.84 percent identity
FT                   over a 639 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30075.1"
FT                   /translation="MNFWGIIKEDFSQPKAQDPAFNSCIELFFNYPGVWAVVNYRFAHF
FT                   FYIRNFKRIARMISGISQFLTGVDLHPGAELGRRIFIDHANGVVIGQTAIIEDDVLIYQ
FT                   GVTLGGTSLEKGTKRHPTIKKGVIIGSGAKVLGNITIGENAKIGSNAVVVKDIGANLTA
FT                   VGIPAYIIEERKNKNIRAIDANCDDKLEKLEKKILELENLILKQPKSQK"
FT   gene            complement(721039..722205)
FT                   /locus_tag="C1336_000830031"
FT                   /note="C1336_000830031 identified by Glimmer3 with a raw
FT                   score of 15.62."
FT   CDS             complement(721039..722205)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830031"
FT                   /product="aspartate aminotransferase"
FT                   /note="C1336_000830031 identified by Glimmer3 with a raw
FT                   score of 15.62. Gene function extrapolated from CJE0853
FT                   (CP000025.1) after blastn alignment (99.08 percent identity
FT                   over a 980 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30076.1"
FT                   /translation="MLTKRSQVLEESITLAITALANELKAKGEDIISFSAGEPDFDTPQ
FT                   TIKNAAISAIEKGCGKYTAVAGIPEVLKAIQIKFKKDNNLDYETNEIITNVGAKHSLFE
FT                   CIECLVEKDDEVIIPSPYWVSYPEMVKFAGGKPVFIEGLEENGFKITAEQLKKAITAKT
FT                   KVLMLNSPSNPVGSIYSKEELTQITKVLEGTQITVLSDEMYEKLHYDGFDFVAFASVSE
FT                   DALKRTVTINGLSKCGAMPGWRFGYMASKNKALISAVKRLQGQSTSNICSITQHAAIPA
FT                   LNGKCDKDIEKMRQAFEKRRNLALDMLKQIPNISVYKPEGAFYLFVNIQKIEKDSMKFC
FT                   QKLLEQEKVAVVPGIGFGMDGYFRLSYATSDELIKKGLERIANFIASY"
FT   gene            720675..720986
FT                   /locus_tag="C1336_000830032"
FT                   /note="C1336_000830032 identified by Glimmer3 with a raw
FT                   score of 12.96."
FT   CDS             720675..720986
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830032"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000830032 identified by Glimmer3 with a raw
FT                   score of 12.96. Gene function extrapolated from
FT                   CJJ81176_0782 (CP000538.1) after blastn alignment (98.06
FT                   percent identity over a 309 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30077.1"
FT                   /translation="MKIIQWNRAEFSPKEVKINVLIDNEKGKEIQILLAKDSVMKEHKA
FT                   PFAIHIQVLSGKIWFEVEKEKFELNALDMISLEANVAHSLGGLENSIIRLSLNKSDSI"
FT   gene            719584..720581
FT                   /locus_tag="C1336_000830039"
FT                   /note="Features C1336_000830033, C1336_000830034 joined to
FT                   form C1336_000830039 to correct 454 sequencing error
FT                   (C1336_000830033 identified by Glimmer3 with a raw score of
FT                   8.41, C1336_000830034 identified by Glimmer3 with a raw
FT                   score of 12.40)."
FT   CDS             join(719584..720309,720309..720581)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830039"
FT                   /product="hypothetical protein"
FT                   /note="Features C1336_000830033, C1336_000830034 joined to
FT                   form C1336_000830039 to correct 454 sequencing error
FT                   (C1336_000830033 identified by Glimmer3 with a raw score of
FT                   8.41, C1336_000830034 identified by Glimmer3 with a raw
FT                   score of 12.40). Gene function extrapolated from
FT                   CJJ81176_0781 (CP000538.1) after blastn alignment (96.89
FT                   percent identity over a 933 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30078.1"
FT                   /translation="MNLSFKTFDISNNERLKAKKIQGKKYEIFLNENEQSLITPKVSFK
FT                   EILRYYYLYPKNAIPSFKLPFFKPDLSGFSTPHITWLGHSSLFISFKEYKILIDPVFNT
FT                   HASPISFINKAFKNAPVYNVNDFNEIFAVIITHSHFDHLDAKSVKALKDKAKFFITPLK
FT                   VGNYLKSYGVSEKKIIELDWWSGIEFDDLKIIAIPAQHSSSRGDGKNKTLWASFVMEFL
FT                   SVDKRVFFSADGGYFTHFKKIGEYFGSFDLACLESGQFNIAWPYSHSFPGQILKEAKDL
FT                   NAKAVMPIHWGRFLAGTHAWNEVVKFFYENLDLPLITPKMGEAYEIRAKFK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            717368..719239
FT                   /locus_tag="C1336_000830035"
FT                   /note="C1336_000830035 identified by Glimmer3 with a raw
FT                   score of 12.49."
FT   CDS             717368..719239
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830035"
FT                   /product="chaperone protein DnaK"
FT                   /note="C1336_000830035 identified by Glimmer3 with a raw
FT                   score of 12.49. Gene function extrapolated from
FT                   CJJ81176_0775 (CP000538.1) after blastn alignment (98.13
FT                   percent identity over a 1814 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30079.1"
FT                   /translation="MSKVIGIDLGTTNSCVAVYERGESKVIPNKEGKNTTPSVVAFTDK
FT                   GEVLVGDSAKRQAVTNPEKTIYSIKRIMGLMINEDAAKEAKTRLPYHITERNGACAIEI
FT                   AGKIYTPQEISAKVLMKLKEDAEAFLGESVVDAVITVPAYFNDAQRKATKEAGTIAGLN
FT                   VLRIINEPTSAALAYGLDKKDSEKIVVYDLGGGTFDVTVLETGDNVVEVLATGGNAFLG
FT                   GDDFDNKLIDFLANEFKDETGIDLKNDVMALQRLKEAAENAKKELSSANETEINLPFIT
FT                   ADASGPKHLVKKLTRAKFEGMIDSLVAETITKINEVVSDAGLKKDEIKEIVMVGGSTRV
FT                   PLVQEEVKKAFNKDLNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLSLGIETLG
FT                   GVMTKIIEKGTTIPTKKEQVFSTAEDNQSAVTINVLQGEREFSRDNKSLGNFNLEGIPP
FT                   APRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINNMVKDAELHK
FT                   EEDKKRKEAVDARNAADSLAHQVEKSLSELGEKVATADKENIQKALDDLRETLKNQNAS
FT                   KEEIESKMKALSEVSHKLAENMYKKDEPNAANDKKKKDDDVIDAEVE"
FT   gene            716815..717345
FT                   /locus_tag="C1336_000830036"
FT                   /note="C1336_000830036 identified by Glimmer3 with a raw
FT                   score of 19.11."
FT   CDS             716815..717345
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830036"
FT                   /product="heat shock protein GrpE"
FT                   /note="C1336_000830036 identified by Glimmer3 with a raw
FT                   score of 19.11. Gene function extrapolated from Cj0758
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 159 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30080.1"
FT                   /translation="MSEQKQEFENENAENSEHLQDENLQNIEDVEQNKLQKDYDELKDK
FT                   YMRANAEFENIKKRMEKEKLSAMAYANESFAKDLLDVLDALEAAINVECHDEISLKIKE
FT                   GVQNTLDLFLKKLEKHGVALIKEEKEFDPNLHEAMFHVDSENHQSGEVVTVLQKGYKIA
FT                   DRVIRPTKVSVAK"
FT   gene            716027..716818
FT                   /locus_tag="C1336_000830037"
FT                   /note="C1336_000830037 identified by Glimmer3 with a raw
FT                   score of 13.16."
FT   CDS             716027..716818
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830037"
FT                   /product="heat-inducible transcription repressor HrcA"
FT                   /note="C1336_000830037 identified by Glimmer3 with a raw
FT                   score of 13.16. Gene function extrapolated from C8J_0708
FT                   (CP000814.1) after blastn alignment (98.74 percent identity
FT                   over a 792 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30081.1"
FT                   /translation="MKSRDKKDLILDSIIQTYLLDNVPIGSNELNLNLCIPASTIRVYL
FT                   KRLSDEGLITQLHISSGRIPTILTMQNYWQSFWKKEQDQDINIKSENFLKELSKEFEIY
FT                   CLVYGGRSLVLKEVLDLNAKFIVLDFKEEELVLKYEKEAWKFLQSLIGLDLFSIEKIAL
FT                   RVHFMDLVEKIASLRQNLICYRSNEERAYQIYQNDEFVKLLDCGVHRYFKESLEFEPLF
FT                   KEGFMGLKVDAQFLGEDVNIILAGSVYTDYKKILQYIKEAA"
FT   gene            714637..715818
FT                   /locus_tag="C1336_000830038"
FT                   /note="C1336_000830038 identified by Glimmer3 with a raw
FT                   score of 11.85."
FT   CDS             714637..715818
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000830038"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000830038 identified by Glimmer3 with a raw
FT                   score of 11.85. Gene function extrapolated from
FT                   CJJ81176_0772 (CP000538.1) after blastn alignment (97.88
FT                   percent identity over a 1182 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30082.1"
FT                   /translation="MDFIKFLNHFQPISKSSQQASVYKSFKLNLKPNILNEKDENSSSF
FT                   QEQKTDVAQTMLQRLEDEKVFNQKVSDKVKKAERGMTTIYFRDPITNKLVRSALSSTAI
FT                   NKMGIEFDKEDMTKRLDGSYILSGKAENFVAGWYADIAYTRAYVASDRNNDGYLEDYEL
FT                   EDTKSGFVAQETNLGVFVQSYTQLNGSVDTLFGFEKDFREMRPDDTKDIDYAGRTIGLE
FT                   LDKMIRKDGDFNGELSFSETGMQAVKTKAPNSGWTESVGMLTLTKFNQTNTIEIKDILD
FT                   KLGKGVKYDDLSEDEKSLLKMQLSDKIFDEVEDKETGNKKLVLNLDKFKIFYEGFVDLF
FT                   KQRSVRMLGLKPEDATKLNYDNLGEIVNEMKQTYFDTNSTSYGKIADLIKIWA"
FT   gap             752618..753141
FT                   /estimated_length=524
FT   gene            772726..773445
FT                   /locus_tag="C1336_000820000"
FT                   /note="C1336_000820000 identified by Glimmer3 with a raw
FT                   score of 17.39."
FT   CDS             772726..773445
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820000"
FT                   /product="3-deoxy-manno-octulosonate cytidylyltransferase"
FT                   /note="C1336_000820000 identified by Glimmer3 with a raw
FT                   score of 17.39. Gene function extrapolated from C8J_0764
FT                   (CP000814.1) after blastn alignment (98.19 percent identity
FT                   over a 720 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30083.1"
FT                   /translation="MIIIPARLKSSRFHEKILCDIGGVPMFVATARRVSNVDEVCIALD
FT                   DEKVLSIAKEYGLNAVLTSKDHESGTDRINEACKKLALKDDEIIINVQADEPFIECENL
FT                   LKFKEFASSCLDKKAFMASCYKKITQEEAMDPNLVKVLCDKEGYALYFSRAKIPYEREN
FT                   YEESFKGHLGIYAYSVKALREFCSLSSSALERAEKLEQLRAIENGKKIKMLEISTTSMG
FT                   IDTKEDYERALKIYLEK"
FT   gene            771317..772729
FT                   /locus_tag="C1336_000820001"
FT                   /note="C1336_000820001 identified by Glimmer3 with a raw
FT                   score of 15.65."
FT   CDS             771317..772729
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820001"
FT                   /product="threonine synthase"
FT                   /note="C1336_000820001 identified by Glimmer3 with a raw
FT                   score of 15.65. Gene function extrapolated from
FT                   CJJ81176_0833 (CP000538.1) after blastn alignment (99.12
FT                   percent identity over a 570 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30084.1"
FT                   /translation="MKLVESRNVNNVSSFKEALINPNAPEGGLYSPLNLPIFEGEKYAN
FT                   LSYKDFALKLIESFGFGEEELFKKALKSYESFDDKNTPISLQKISEKTYINELWHGPTR
FT                   AFKDMALHPFGVLLSEFSKDKNILIICATSGDTGPATLKSFENAKNVKVACMYPKGGTS
FT                   GVQELQMRALDKDNLKVFAIDEDFDAAQRTLKELLFSKDFQNEIKALNYELCAANSVNF
FT                   GRILFQIIYHYYASLKLFNEFLEEVQIIVPSGNFGNALGAFYAKKMGAKISKIKIASNA
FT                   NNILSEFFNQGIYDLREKSLKKTISPAMDILISSNIERLLFAKFKDKRTKELMNLLKNE
FT                   RYFKLEKEELQSLQEDFEADFCTDEECMQFIKQSKILIDPHTATCFKMLDPLKPSIITS
FT                   TAEWTKFTPSMIKALYDRDSKNEKEDLKFIAKEFNVQVKDEILALFDLKNSDEKVFEAR
FT                   NIKKEILDWMQK"
FT   gene            770394..771317
FT                   /locus_tag="C1336_000820002"
FT                   /note="C1336_000820002 identified by Glimmer3 with a raw
FT                   score of 15.52."
FT   CDS             770394..771317
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820002"
FT                   /product="tetraacyldisaccharide 4'-kinase"
FT                   /note="C1336_000820002 identified by Glimmer3 with a raw
FT                   score of 15.52. Gene function extrapolated from
FT                   CJJ81176_0832 (CP000538.1) after blastn alignment (98.22
FT                   percent identity over a 676 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30085.1"
FT                   /translation="MSEEKNYELWLDNYFFKPNFWQKCLAFILFPLSVFYAFFAILNTF
FT                   FRKKIVFKKPVISVGNLSFGGNGKTPLCKAIAREFDGVFIVLRGYKRKSKGLFVVKNQN
FT                   EILCTLAQSGDEAMEYAFEENIKGVIVSEDRVKGIEKAFELGAKIVVLDDAFSKFHIKK
FT                   FDILLESKIKPYFNFTLPSGAYRLPKFYEKRADFIALEGRDFVRYSFVKENPKAVLVTA
FT                   IAKPFRLHEHFIKARACYFFKDHYEFKKEELENLLKKHNCDTLMLTFKDFVKVKDFGFK
FT                   CQIIELNIELKDSLREKIKTYIKEFE"
FT   gene            769649..770359
FT                   /locus_tag="C1336_000820003"
FT                   /note="C1336_000820003 identified by Glimmer3 with a raw
FT                   score of 16.59."
FT   CDS             769649..770359
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820003"
FT                   /product="NAD+ synthetase"
FT                   /note="C1336_000820003 identified by Glimmer3 with a raw
FT                   score of 16.59. Gene function extrapolated from CJE0901
FT                   (CP000025.1) after blastn alignment (97.26 percent identity
FT                   over a 694 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30086.1"
FT                   /translation="MDWQKITEKMCDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCKR
FT                   ALKENVFALLMPTQISNKANLEDALRLCVDLNLEYKIIEIQSILDAFIKQSENTTLVSL
FT                   GNFAARIRMSLLYDYSALKNSLVVGTSNKSELLLGYGTIYGDLACAFNPIGSLYKSEIY
FT                   ALAKYLNLHENFIKKAPSADLWENQSDEADLGFSYAKIDEGLKALETNDEKLLRTLDPS
FT                   LIAMLKNRMQKKCF"
FT   gene            complement(768978..769574)
FT                   /locus_tag="C1336_000820004"
FT                   /note="C1336_000820004 identified by Glimmer3 with a raw
FT                   score of 11.37."
FT   CDS             complement(768978..769574)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820004"
FT                   /product="putative hydrolase"
FT                   /note="C1336_000820004 identified by Glimmer3 with a raw
FT                   score of 11.37. Gene function extrapolated from Cj0809c
FT                   (AL111168.1) after blastn alignment (97.49 percent identity
FT                   over a 597 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30087.1"
FT                   /translation="MQIIKQACGVYETNCYILFTPKGEFIIDPGTDALLFIKQHVKNPL
FT                   AILNTHGHYDHIWDNAKVKKEYNIPIYIHKNDAFMLHDNFNQGYDSSDADFLVDNEDIL
FT                   NICGIDFKFHFLPGHTPGCTMIEIVGKNIMFSGDFLFYRSIGRWDFPYSDANLMKQSLE
FT                   KVMTYKEDFKLLPGHGQETTLKEEQVHLPSWLRYF"
FT   gene            complement(768661..768966)
FT                   /locus_tag="C1336_000820005"
FT                   /note="C1336_000820005 identified by Glimmer3 with a raw
FT                   score of 6.74."
FT   CDS             complement(768661..768966)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820005"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000820005 identified by Glimmer3 with a raw
FT                   score of 6.74. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30088.1"
FT                   /translation="MELDQILLYAFIFLNLFALFGLFLGNKKKNQFNDKKFYKICPCKK
FT                   MAENGSLSTICIYSAVGGFFYSVLSIGFVGFGNWILNFIFLLALLSVFLGWKLKLD"
FT   gene            767841..768620
FT                   /locus_tag="C1336_000820006"
FT                   /note="C1336_000820006 identified by Glimmer3 with a raw
FT                   score of 15.68."
FT   CDS             767841..768620
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820006"
FT                   /product="oxidoreductase, short chain
FT                   dehydrogenase/reductase family"
FT                   /note="C1336_000820006 identified by Glimmer3 with a raw
FT                   score of 15.68. Gene function extrapolated from
FT                   CJJ81176_0828 (CP000538.1) after blastn alignment (98.08
FT                   percent identity over a 780 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30089.1"
FT                   /translation="MNTEFQGKTLVISGGTRGIGKAIVYEFAKVGANIAFTYNSNAQIA
FT                   DEMVQDLEKNYKIKARAYEFNILEPETYKELFEKIDVDFDRVDYFISNAIISGRAVVGG
FT                   YTKFMKLKPKGINNIFTATVNAFVVGAQEAAKRMEKVGGGSIISISSTGNLVYIENYSG
FT                   HGTAKAAVEAMARYAATELGEKNIRVNVVSGGPIETDALRAFTNYEEVKQATINLSPLN
FT                   RMGQPEDLAGACLFLCSSKASWVTGHTFIVDGGTTFK"
FT   gene            766945..767841
FT                   /locus_tag="C1336_000820007"
FT                   /note="C1336_000820007 identified by Glimmer3 with a raw
FT                   score of 14.87."
FT   CDS             766945..767841
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820007"
FT                   /product="dihydrodipicolinate synthase"
FT                   /note="C1336_000820007 identified by Glimmer3 with a raw
FT                   score of 14.87. Gene function extrapolated from Cj0806
FT                   (AL111168.1) after blastn alignment (98.22 percent identity
FT                   over a 897 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30090.1"
FT                   /translation="MDKNIIIGAMTALITPFENGKVDEQSYARLIKRQIENGIDAVVPV
FT                   GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVDLAKFAKEHGADGI
FT                   LSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIY
FT                   GVKEASGNIDKCVDLLAHEPRMMLISGEDAINYPILSNGGKGVISVTSNLLPDMISALT
FT                   HFALDENYKEAKKINDELYNINKILFCESNPIPIKTAMYIAGLIESLEFRLPLCPPSKE
FT                   NFAKIEEVMKKYKIKGF"
FT   gene            765702..766952
FT                   /locus_tag="C1336_000820008"
FT                   /note="C1336_000820008 identified by Glimmer3 with a raw
FT                   score of 13.19."
FT   CDS             765702..766952
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820008"
FT                   /product="peptidase, M16 family"
FT                   /note="C1336_000820008 identified by Glimmer3 with a raw
FT                   score of 13.19. Gene function extrapolated from
FT                   CJJ81176_0826 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 216 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30091.1"
FT                   /translation="MIAYEKIQLKNKLEVYALPVNKNSDVISVDIFYKVGSRNEIMGKS
FT                   GIAHMLEHLNFKSTKNLKAGEFDEIVKGFGGVDNASTGFDYTHYYIKCAKKNLDKALEL
FT                   FAELMANLNLKDEEFQPERAVVLEERRWRTDNNPLGYLYFRLFNHAFMYHPYHWTPIGF
FT                   FKDIENWSIEDIKEFHSIYYQPKNAILLVSGDMESKEVFELSKKHFEKIKNTKTIPKIH
FT                   TKEPKQDGAKRIYLHKNSDTELLALAYKIPNFKHKDIPALNALSELLGSGKSSLMSEIL
FT                   IDKLNLINDYYAYANDCIDENLFIFICNCNPNVNAEKVEKELLKIIDKLKMGKISQKDL
FT                   QRVKNNVKSDFIFSLNNASAVANIYGSYLARGDINPLLNYEKDIQNLELKDLISCAKKY
FT                   FIQENSTTVILRKDSNG"
FT   gene            764647..765705
FT                   /locus_tag="C1336_000820009"
FT                   /note="C1336_000820009 identified by Glimmer3 with a raw
FT                   score of 17.01."
FT   CDS             764647..765705
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820009"
FT                   /product="dihydroorotate dehydrogenase"
FT                   /note="C1336_000820009 identified by Glimmer3 with a raw
FT                   score of 17.01. Gene function extrapolated from C8J_0755
FT                   (CP000814.1) after blastn alignment (98.39 percent identity
FT                   over a 1059 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30092.1"
FT                   /translation="MAYEMIKPLLFKLNPEHAHALVEYSLRALSASFPGALSFLAHKYI
FT                   VDDESLRQNLLGLDFNNPVGLAGGFDKNATMIRPLSALGFGFLEVGTFTPKPQEGNEKP
FT                   RLFRLVKQESIQNAMGFNNEGAEKIALRLVKTYPFVLPLGVNIGKNKITPNDKALEDYF
FT                   TLFRDLKDLCDYFIVNISSPNTKNLRELQNDDFLNTLLEEAKKITSKPILIKIAPDMKI
FT                   DDALNLCENAIKKGADGFILANTSVDYSLLDNNRTFGGISGRLITEKSGIFFKEVAKIL
FT                   FGKTLLIASGGIDSADIAYERIKNGANLVQVYTALIFKGPSLVKNINQNLIELLRKDGF
FT                   LHISEAVGVNLK"
FT   gene            762873..764615
FT                   /locus_tag="C1336_000820010"
FT                   /note="C1336_000820010 identified by Glimmer3 with a raw
FT                   score of 14.47."
FT   CDS             762873..764615
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820010"
FT                   /product="lipid export ABC transport protein"
FT                   /note="C1336_000820010 identified by Glimmer3 with a raw
FT                   score of 14.47. Gene function extrapolated from Cj0803
FT                   (AL111168.1) after blastn alignment (98.91 percent identity
FT                   over a 552 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30093.1"
FT                   /translation="MHNEMNLKEVLIRFKPFYKRYWKQFAIAIFGMILASGGTAGSFYA
FT                   LEPILNYIFVEKNEALLYTVPFLLVLMYFFKNLGTYLQSFYVSFIGTDMLRVLRARVLK
FT                   NVLRLDMDFFKRYRSGELVSRCTNDINALQSIVSNIIPDFFRELLTAIGLLAVVLYQSP
FT                   TLAFFALVILPLAIFPLVWFAKKLKKYARNIQETNSDLLSYLGEIFSNIELIKANDNEK
FT                   KESDKFAKHNDTLCKLNLKSARIDALTSPLMDMMGSVGVAAVIIVGGREVINGSMSVGS
FT                   FISFVSALFAIYTPLKRLSSLYGKLQGAVAASERTFYLLDLEPQIKGGSKELKNIKKIS
FT                   FENVEFAYENPHKSVLKGINFDFVKGQMLALVGTSGGGKSSIINLLMYFYEKQKGKILL
FT                   NQEDISTFTIESLHAKIGLVTQNIYLFNDSFAANIAYSEELEEEKVIQALKLANAYEFV
FT                   KEMGGIWAEVKEHGKNLSGGQKQRIAIARALYKNPDVLIFDEATSALDNESEKAIVKTI
FT                   ENLKQDRLILVVAHRLSTIENADKIVVLDKGKVLAIGKDEELLQTCSLYQKFKSKEKTK
FT                   PNFS"
FT   gene            761492..762880
FT                   /locus_tag="C1336_000820011"
FT                   /note="C1336_000820011 identified by Glimmer3 with a raw
FT                   score of 14.05."
FT   CDS             761492..762880
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820011"
FT                   /product="cysteinyl-tRNA synthetase"
FT                   /note="C1336_000820011 identified by Glimmer3 with a raw
FT                   score of 14.05. Gene function extrapolated from
FT                   CJJ81176_0823 (CP000538.1) after blastn alignment (99.53
FT                   percent identity over a 213 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30094.1"
FT                   /translation="MRLLDSVTKEKIKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDL
FT                   LRRVLLAQGNRVKFARNYTDIDDKILKKMAQSGQTLEEITEFYIKSYEEDMRVLNVLDP
FT                   DFKPRATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENISRLS
FT                   NEVQKRNESDFVLWKFDENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLF
FT                   PHHENEAAQCRCGCKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDALKEFMGEALRF
FT                   YLSSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEIAKQI
FT                   LEILNDDLNISKALALLDDFISSANLELDKENKNKILKQNIKEALSELAKIFGFGFMDT
FT                   TLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPNGTIWE
FT                   KINA"
FT   gene            760041..761492
FT                   /locus_tag="C1336_000820012"
FT                   /note="C1336_000820012 identified by Glimmer3 with a raw
FT                   score of 14.04."
FT   CDS             760041..761492
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820012"
FT                   /product="integral membrane protein MviN"
FT                   /note="C1336_000820012 identified by Glimmer3 with a raw
FT                   score of 14.04. Gene function extrapolated from C8J_0752
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 152 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30095.1"
FT                   /translation="MKSLVFKNFIINALGILFSRILGLARDVLIALFLGAGLYSDIFFV
FT                   ALKMPAFFRRIFAEGAFGQSFLPNFVKAKKKGAFCVSVMMQFSLIVFLFCLLVSFFSSF
FT                   FTKLFAFGFNADTIALAAPLVAINFWYLFFIFLVTFLGVILNYRQKFFITSFSAALFNL
FT                   SIVIAAFFVDKNAPQNTLYYFSYATVLSGVAQLILHLLVLKNNPVIRAMALSIKFKKAK
FT                   AKLQGFYGNFFHGVLGSSATQFSSLLDTTIASFLMSGSISYLYYANRVFQLPLALFAIA
FT                   LTQVSFPKILKHLKSGQENLALKFMQRALALLSILLIASSIVGSVFALEISKLLFERGN
FT                   FTHEDSVITAYVLIAYLIGLLPFGLQKLFSLWLYAKFKQKTAAWIAVKSLIISALCSMA
FT                   FIFLIKDESLKVIAVALSSSISAFYLLGANIKEFGFKKFFALISIKICLLVIVALIVFT
FT                   ILLILIKPYILSFFIGIFTSFKGVF"
FT   gene            complement(758079..759938)
FT                   /locus_tag="C1336_000820013"
FT                   /note="C1336_000820013 identified by Glimmer3 with a raw
FT                   score of 11.22."
FT   CDS             complement(758079..759938)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820013"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000820013 identified by Glimmer3 with a raw
FT                   score of 11.22. Gene function extrapolated from C8J_0751
FT                   (CP000814.1) after blastn alignment (98.35 percent identity
FT                   over a 1272 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30096.1"
FT                   /translation="MALDEKIIAYTENPARELLSVASRTNLNLNELDFNLLAFSTQYRF
FT                   GDLEWEKISEKELTLFDKDEIFLKNDLQIKQEYKIEIFHGINQSKASQAVKLVANKNLT
FT                   KIVAQIDFANLDFHEKLALELLQNIYKKMLKLKFLIGIRIFDFKKNLMSFCNQHKNTPL
FT                   NKTIQITVAQGIDPIESQDESLILTYKEKTKNYTIDEKRSGIIAVDENEVVLKHTKFKQ
FT                   GKEGKDLNLHTLKVLAANENKVKFSCSSAFKQVEQDGYTEYIALKKGYVVQDGENFDIA
FT                   NELDFNGVDFKNIGIIRAGLDKNVKINIKFLSEVKDAVNSGVGIECEELNIVGSIGSNT
FT                   QLNATKMKIEGTTHSKAKIQAKQAYIKTHRGFAEAEILNIDLLEGGTIKAKEVRIKKSL
FT                   GGNIQADKIYIENLESNNSCVFFENTTIERINGDNNKFHAKIKTLDKNYDEEFAILGEQ
FT                   ISKLNHKINKIRQYILSSKNGILSVEKKIAELKNQGQNVPVQYEKALKDFSLQNLELNK
FT                   LQNEEKELLERKKSLQLELINLQKMLFEATFINKSGKWTDMNEIKFSLLEPKEDIFYSS
FT                   FVNESAKFIGIKKVIQNNQESIEIHKKLDYEEKDIAWLSASKE"
FT   gene            complement(757552..758103)
FT                   /locus_tag="C1336_000820014"
FT                   /note="C1336_000820014 identified by Glimmer3 with a raw
FT                   score of 16.12."
FT   CDS             complement(757552..758103)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820014"
FT                   /product="putative Holliday junction ATP-dependent DNA
FT                   helicase"
FT                   /note="C1336_000820014 identified by Glimmer3 with a raw
FT                   score of 16.12. Gene function extrapolated from Cj0799c
FT                   (AL111168.1) after blastn alignment (98.73 percent identity
FT                   over a 552 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30097.1"
FT                   /translation="MVVGIEGIITKKEPTFIIVKCASGLSYGIFISLFCSAKIQTQEKH
FT                   EFFITQIIKEDSNKFYGFLDKDEQKMFEMLLKVNGVGANTAMAVCSSLDVNSFYKALSL
FT                   GDESVLKKVPGIGPKSAKRIIVELSDTKTKLENVSDDKSEALTALLTLGFKQEKIISVL
FT                   ASAQATGTSELIKEALKKLG"
FT   gene            complement(756502..757542)
FT                   /locus_tag="C1336_000820015"
FT                   /note="C1336_000820015 identified by Glimmer3 with a raw
FT                   score of 13.38."
FT   CDS             complement(756502..757542)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820015"
FT                   /product="D-alanine--D-alanine ligase"
FT                   /note="C1336_000820015 identified by Glimmer3 with a raw
FT                   score of 13.38. Gene function extrapolated from Cj0798c
FT                   (AL111168.1) after blastn alignment (98.91 percent identity
FT                   over a 183 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30098.1"
FT                   /translation="MKFAILFGGNSYEHEISIVSAVVLKKVINQNLEFIFCDEERRFYH
FT                   IPSEKMNSKTFSTKAYKKEKELFVKQGGFFSKGFLKENKLECECMINLIHGRDGEDGKI
FT                   AALFEFYSIKFIGPRLEASVLSFNKELTKLYAKSVGVKTLDYTMLRKNQNSKEKLSFPC
FT                   IIKPARLGSSIGISIVKDEKDLEYAKDVGFEFDNDLVVEEFKNNIKEYNLAGCMINDEF
FT                   VFSIIEEPKKKEFLDFEQKYLSFSGHNELIEADLSEELKEKLKDSFKKIYNPLFKGALI
FT                   RCDFFILDNEVYLNEINPNPGSLANYLFKDFNTTLNALADQISLEKMIKINYNFLHSIN
FT                   GQKGKL"
FT   gene            complement(756227..756442)
FT                   /locus_tag="C1336_000820016"
FT                   /note="C1336_000820016 identified by Glimmer3 with a raw
FT                   score of 11.60."
FT   CDS             complement(756227..756442)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820016"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000820016 identified by Glimmer3 with a raw
FT                   score of 11.60. Gene function extrapolated from C8J_0748
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 93 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30099.1"
FT                   /translation="MLSFKQDEIYTATEVVRNFSPIMEKLKKSESGKIVILKNNKFEAV
FT                   MLSMKEFERLQNAMQLLENIYKNQKA"
FT   gene            complement(755506..756225)
FT                   /locus_tag="C1336_000820017"
FT                   /note="C1336_000820017 identified by Glimmer3 with a raw
FT                   score of 14.71."
FT   CDS             complement(755506..756225)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820017"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000820017 identified by Glimmer3 with a raw
FT                   score of 14.71. Gene function extrapolated from
FT                   CJJ81176_0817 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 173 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30100.1"
FT                   /translation="MAQTQLSYKNKTYQISYEILGDLSLPQILILHGWGANKELMKQSF
FT                   CPFLKDFCQIYMDLAGFGNSSVEEILNTQDYANITELFLKQKKLNVCFFMGHSFGGKVS
FT                   TLLAKEKDTLILLSSAGILAKKSLKVRFKIRIFKILKLFGLGKFYRYFASKDGANLSPM
FT                   MYETFKKVVDEDFSEIFTKQKAKSLIFWGKSDEATPLYCGEKMHQFLKNSTFYPLEGDH
FT                   FFFLKHSAFIAQKIKEI"
FT   gene            complement(754078..755505)
FT                   /locus_tag="C1336_000820018"
FT                   /note="C1336_000820018 identified by Glimmer3 with a raw
FT                   score of 11.18."
FT   CDS             complement(754078..755505)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820018"
FT                   /product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
FT                   6-diaminopimelate--D-alanyl-D-alanine ligase"
FT                   /note="C1336_000820018 identified by Glimmer3 with a raw
FT                   score of 11.18. Gene function extrapolated from C8J_0746
FT                   (CP000814.1) after blastn alignment (98.98 percent identity
FT                   over a 879 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30101.1"
FT                   /translation="MLINTLYFINSLFFNFCIAFYLMSALQWYSYKFKRVFFHYHKPLW
FT                   HLYFLFIPYFLFLAFPLYSLAYFALIHTPILYFWNKGIDKKLVFTSKVKWFFVFVFVYN
FT                   VIFAILALRFSFLFNLFSLPFALFSLKIYEFFTNLYYKKQAKAKLRANENLKIILITAS
FT                   FGKTSIKNFLYELLKDDFKSYKTPRSVNTLLGIVADINTNLSQDTQIYIAEAGARLKGD
FT                   IDEITRFLQPHISIVGEIGNAHLEYFKSVENIRSTKLEALNSKRLEKAFLHSSTKKEED
FT                   KLISLYDDKLNLIHSSLEGLEFKVDIENKSYDFKSQILGDFNAQNLCVCILCAHYLGVK
FT                   LEKIQKQVLNINSVEHRLQVLSREPKFIIDDGFNGNFKGMSTSYELCKSYKGRKVLVSP
FT                   GIVEVSEEENIKLAKIINECFDLAIISAQINAEIFKKELKIKTIILKEKSQLVQTLAKE
FT                   TKNGDLILFSNDAPSFM"
FT   gene            753148..754020
FT                   /locus_tag="C1336_000820019"
FT                   /note="C1336_000820019 identified by Glimmer3 with a raw
FT                   score of 10.80."
FT   CDS             753148..754020
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000820019"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000820019 identified by Glimmer3 with a raw
FT                   score of 10.80. Gene function extrapolated from C8J_0115
FT                   (CP000814.1) after blastn alignment (93.48 percent identity
FT                   over a 138 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30102.1"
FT                   /translation="MAEYNVSDIREYLGVDKYYSNIDMAETIKQYYNLFSNALSQSFPS
FT                   DKTSFSEADINSMPSGYAVGGDKCMNFNDPNNRMNITHLKDFSGALVSNVYQTSEQAEK
FT                   ADDLWADSGNMINGLKPETLGLSLEEIKNVSQAKYECDFKPDMSFYPKNEDGTYTKEDL
FT                   FMSFLKSQGGQPVESPKTTLNPKVEAYNTAMAKESFSTTSVDLIDIMTGKVDFASLLKY
FT                   ELDRGRIAGELYMYEKGMSPKQALGNWALDSEIKQALANGWKASSESINSFADSIADRL
FT                   NNLLEQTRV"
FT   gap             773460..773925
FT                   /estimated_length=466
FT   gene            778713..779012
FT                   /locus_tag="C1336_000810000"
FT                   /note="C1336_000810000 identified by Glimmer3 with a raw
FT                   score of 11.11."
FT   CDS             778713..779012
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000810000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000810000 identified by Glimmer3 with a raw
FT                   score of 11.11. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30103.1"
FT                   /translation="MKEVKGGVYTFNRASNYDNVIGVRSYAYIAGDSDKTPEQFLQAMN
FT                   ISGNKIILAKYRYVNNQKEYYLQSYEKSTGTLRDIWAWNGSPAYDVLKDFKNQY"
FT   gene            complement(777611..778444)
FT                   /locus_tag="C1336_000810001"
FT                   /note="C1336_000810001 identified by Glimmer3 with a raw
FT                   score of 5.46."
FT   CDS             complement(777611..778444)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000810001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000810001 identified by Glimmer3 with a raw
FT                   score of 5.46. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30104.1"
FT                   /translation="MGILEKMTYQDEKENLLVLEKIVKLLNDYIYEQKNIIYDKFDLIF
FT                   KRPEQFNDEYIISHYLSICRAIKSVNENRYLVRWEIASGIPQTIITQTIIYDIARFYNA
FT                   IRGKEKSFDKSLQSVVMEINNIIGSIQGLDDDIHPQRLFNYSFGCHLSPYPKFYISLIE
FT                   KAFLIRMALEGKIKWMIFGDLQEREIKLHDFLLKLKENHKQYFDLPPNVDFDKIMLVKN
FT                   WCNRIIHDGLFPYIWVVWDAIEIMEPLFHTSNKEKIDLEGFHYRKDITQDISKFF"
FT   gene            777125..777529
FT                   /locus_tag="C1336_000810002"
FT                   /note="C1336_000810002 identified by Glimmer3 with a raw
FT                   score of 10.16."
FT   CDS             777125..777529
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000810002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000810002 identified by Glimmer3 with a raw
FT                   score of 10.16. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30105.1"
FT                   /translation="MSTTDGKTIIEPENLIYKRDEKTFFKLESYVNFGGFVKRLNNFYN
FT                   DLEKFTQLNKNKIENLEKEIVELKSITGDNTPKYKRKDYLEALREDNRIIMDEIEKMSK
FT                   QKNYKSDFVPKSAKILEDLNKYNEIKVLLR"
FT   gene            complement(776416..776973)
FT                   /locus_tag="C1336_000810003"
FT                   /note="C1336_000810003 identified by Glimmer3 with a raw
FT                   score of 8.22."
FT   CDS             complement(776416..776973)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000810003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000810003 identified by Glimmer3 with a raw
FT                   score of 8.22. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30106.1"
FT                   /translation="MGYKTKKGITTIWGQDLERIVRENKVLRGEYARFKIVGQEEYEIK
FT                   RKAKINNKWQEVVKTLKKPIWEVSVIGREKDLKQINKAKTTKKYKIIQDKGVNNERDYT
FT                   KQYRQRVLQELGNKSTIRRETAQERNSMRILSKQPMVHNTKRTQMLLHINALNQLQQGE
FT                   RGRSDNILRWTSVRNNEIERDG"
FT   gene            complement(775466..776320)
FT                   /locus_tag="C1336_000810004"
FT                   /note="C1336_000810004 identified by Glimmer3 with a raw
FT                   score of 8.28."
FT   CDS             complement(775466..776320)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000810004"
FT                   /product="hmcD domain protein"
FT                   /note="C1336_000810004 identified by Glimmer3 with a raw
FT                   score of 8.28. Gene function extrapolated from CJE0054
FT                   (CP000025.1) after blastn alignment (81.69 percent identity
FT                   over a 355 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30107.1"
FT                   /translation="MKKIILILAVLSGCLFASDELNIDSLFKKQIGLRSITSLSLLSTG
FT                   NPHSYYIYPNIGVNGDLNVWNDTKQLYLNQTFIYTLTPNFDLLISGGGNYARQEYNNII
FT                   SGAFTSKNTLNFDSLWIGFIYTGESIADFVPQIKFQTAIIQREKTVLQTKNFYFQSQNL
FT                   EASLRGYSDPVVYSIYTGFGYNAQRKFKIAKIDYGNSIYFGGNLSIILSPKITLDLGAE
FT                   QRFQTEQKINGVKNSEIRSIPTISGGSTYSINQDTAVSVSASLGGSSAAPDAIFGINLW
FT                   KKF"
FT   gene            complement(774888..775481)
FT                   /locus_tag="C1336_000810005"
FT                   /note="C1336_000810005 identified by Glimmer3 with a raw
FT                   score of 8.69."
FT   CDS             complement(774888..775481)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000810005"
FT                   /product="peptidase family protein"
FT                   /note="C1336_000810005 identified by Glimmer3 with a raw
FT                   score of 8.69. Gene function extrapolated from
FT                   JJD26997_0068 (CP000768.1) after blastn alignment (90.57
FT                   percent identity over a 159 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30108.1"
FT                   /translation="MEKILKIALMVALLPLFLKAEFVVKSYQEIKNEKVVRQNYEESCG
FT                   AASLATLINTLDDNNLTELDLLKTMSGQKLYTDMVSFADLNDAVKKLGYESKSYKVDRK
FT                   ILENIISVPILVKIEDDPRFPHFVVIINHKGNYLQILDPSYGEYISSKREFYSVWDRYN
FT                   KGGFALVVNPKKQLKDYKLNLPKPLNFEIEPFGF"
FT   gene            773930..774856
FT                   /locus_tag="C1336_000810006"
FT                   /note="C1336_000810006 identified by Glimmer3 with a raw
FT                   score of 11.08."
FT   CDS             773930..774856
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000810006"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000810006 identified by Glimmer3 with a raw
FT                   score of 11.08. Gene function extrapolated from Cj0794
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 84 bp alignment). Similar to Cj0794."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30109.1"
FT                   /translation="MPEDFKIHKSTLDEIYNFNEAQYQDIKEQLGISRYFSNIDMADTI
FT                   KQYYNQFNQIVNHTFNDTNKTSFTEADINSMPKGYISVGYKGLDFSDQSNPYNALGLVN
FT                   HSNTKVTNVFKTDDEFHEAQAIQMGMMGIDFYPQKLNISTQSLSQGALMEGGFNPDMSV
FT                   YPQNEDGSYSKEALFMSFLKSEGGYMVAGKNTTIAPQAMNYNLNVAKQSIPKYSNVDFD
FT                   DIMTGKVDFASLLKGYAQDGWLDAGIYAMEKGVAWQNTSIGYGGAWFDNQFNQAKANGW
FT                   KASNESINSFVNNIMDRLNNLIEQTRV"
FT   gap             779042..779556
FT                   /estimated_length=515
FT   gene            844947..845084
FT                   /locus_tag="C1336_000800000"
FT                   /note="C1336_000800000 identified by Glimmer3 with a raw
FT                   score of 4.19."
FT   CDS             844947..845084
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800000 identified by Glimmer3 with a raw
FT                   score of 4.19. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30110.1"
FT                   /translation="MVERVYGNVRFKSCTGRKNNVFPSFNEAQIFFERLKKQKMKKGYA
FT                   "
FT   gene            844614..844844
FT                   /locus_tag="C1336_000800001"
FT                   /note="C1336_000800001 identified by Glimmer3 with a raw
FT                   score of 8.74."
FT   CDS             844614..844844
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800001 identified by Glimmer3 with a raw
FT                   score of 8.74. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30111.1"
FT                   /translation="MEKNTINNENIQKNEILIPKRVLFDEKTLKMIEMMIPTYKDEISN
FT                   TNKENEKINQMIKLAIEKMFKNDFLNKINNF"
FT   gene            complement(844217..844384)
FT                   /locus_tag="C1336_000800002"
FT                   /note="C1336_000800002 identified by Glimmer3 with a raw
FT                   score of 7.83."
FT   CDS             complement(844217..844384)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800002 identified by Glimmer3 with a raw
FT                   score of 7.83. Gene function extrapolated from
FT                   JJD26997_0872 (CP000768.1) after blastn alignment (97.04
FT                   percent identity over a 169 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30112.1"
FT                   /translation="MKLKNTTISEDLERWIEAYLKHIQALSYSNNTFLLYRRILLDLVE
FT                   YSLDYQDKSK"
FT   gene            complement(843447..844118)
FT                   /locus_tag="C1336_000800003"
FT                   /note="C1336_000800003 identified by Glimmer3 with a raw
FT                   score of 9.63."
FT   CDS             complement(843447..844118)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800003"
FT                   /product="site-specific recombinase, phage integrase
FT                   family"
FT                   /note="C1336_000800003 identified by Glimmer3 with a raw
FT                   score of 9.63. Gene function extrapolated from CJE1094
FT                   (CP000025.1) after blastn alignment (98.77 percent identity
FT                   over a 489 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30113.1"
FT                   /translation="MRVLTSFFSFISDNNDDLFVFSFDMKKIRFRTEKSEEKLNYLNEN
FT                   EIIRLNNVLEKEKAKKEVYNSFRNSLLIKLMLYGGLRISEALNVKLCDFEEVDDEILKI
FT                   SIIGKGGKEQFAFIKKEEVDDELEYFKENIQDSDYIMQTSTGKHLNRSNAFLIVNNIYA
FT                   KALISKKGLHLLRHTLAMRLTAKGTNLVVIQKILRHANLNTTTIYAKATNDTIKAALLN
FT                   N"
FT   gene            843180..843404
FT                   /locus_tag="C1336_000800004"
FT                   /note="C1336_000800004 identified by Glimmer3 with a raw
FT                   score of 8.01."
FT   CDS             843180..843404
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800004 identified by Glimmer3 with a raw
FT                   score of 8.01. Gene function extrapolated from CJE1093
FT                   (CP000025.1) after blastn alignment (96.79 percent identity
FT                   over a 218 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30114.1"
FT                   /translation="MVEIYQELQKGSQTPDLIDIEELEFNKEDIFKELFYALGGLGSMY
FT                   SVEMIQSRIANFIKILGGEPKLLLERFTA"
FT   gene            842036..843040
FT                   /locus_tag="C1336_000800005"
FT                   /note="C1336_000800005 identified by Glimmer3 with a raw
FT                   score of 7.18."
FT   CDS             842036..843040
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800005"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800005 identified by Glimmer3 with a raw
FT                   score of 7.18. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30115.1"
FT                   /translation="MSSAREKANIFNNMLAEKIDPKEQIQKEDIQKSKTLKEVFNEWSQ
FT                   VFYKNNTSYNLSKRLKTHIISKYEDKHINELAKNDILLILDKLYVEGKLETIKRVFLGL
FT                   KKMLMYAINKEYIENSNILTLDMKALYGSPKKQNLRAITKEERFKELLLAIENYNGNIF
FT                   TKVALQISPYLFLRSANIRNLEWSEIDFKNLKIIIPANKIKGGEDFIVPLSESVIKLFE
FT                   FIKPFSFHNSKYVFPSDISKSKTMSENTLNQAIKRLGFGDEMVFHGFRTTASTLLYEFK
FT                   NLHGQDSEVIELCLDHRERNNVKAAYNRSLRLNDRKLLMQWWSDYVDNLKGII"
FT   gene            841840..841977
FT                   /locus_tag="C1336_000800006"
FT                   /note="C1336_000800006 identified by Glimmer3 with a raw
FT                   score of 5.41."
FT   CDS             841840..841977
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800006"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800006 identified by Glimmer3 with a raw
FT                   score of 5.41. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30116.1"
FT                   /translation="MVIVNDKQLKNLIVEKRTYIKDACTKNLYIEAKGSLKGTIIFFLF
FT                   "
FT   gene            841543..841629
FT                   /locus_tag="C1336_000800070"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            841543..841629
FT                   /locus_tag="C1336_000800070"
FT                   /product="tRNA-Leu"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(839113..841362)
FT                   /locus_tag="C1336_000800007"
FT                   /note="C1336_000800007 identified by Glimmer3 with a raw
FT                   score of 12.39."
FT   CDS             complement(839113..841362)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800007"
FT                   /product="flagellin family protein"
FT                   /note="C1336_000800007 identified by Glimmer3 with a raw
FT                   score of 12.39. Gene function extrapolated from
FT                   JJD26997_1031 (CP000768.1) after blastn alignment (93.42
FT                   percent identity over a 593 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30117.1"
FT                   /translation="MRITNKLNFTNSVNNSMGGQSALYQISQQLASGLKIQNSYEDASI
FT                   YIDNTRLEYEIKTLEQVKQATNSAKEMTQNSMKALQDMVKLLEDFKVKVTQAASDGNSQ
FT                   TSREAIAKELERIKESIVQLANTSVNGQYLFAGSQVANKPFDSNGNYYGDKNNINVVTG
FT                   AGTESPYNIPGWDLFFKADGDYKKQITTNISFTDNRYTDKDKQEYLNGDSAWKQLIGQN
FT                   YVKDGKLDPDIDFEDKDRKLNFPPSTLYVQGTKPDGTSFKSAVLVKPDDKIEDVLEQIG
FT                   ALYGNTANNKVVEVSINNSGQIQITDLKQGNNKLDFHAVAYTPQMDKTESFKAMEKFVK
FT                   DNDLNMDNVTNAVMQEAMKNGDITNPTSPVTIKLTGKDGKEQEFTFSLAQTDFIKSNMT
FT                   DSAGNKANGADYDNVYFEKDGNTVYGNVSQVIKGSNAYATDSTKLSEVMAGNSLNGTTL
FT                   NLKVNSKGGNSYDVTINLQTSTVSYPDPNNPGQTISFPITHTDPATGNSGVVTGSNDIT
FT                   YGQINDIIGMFAADKIPTQSITAANGKVDANGYNSLQQLMKDSQATVDVSMDYKGRISV
FT                   TDKLSSGTNIGISLSDSQSGHFPQPPYTTTAQVENGPNFSFSANNALVIDEPNVDLIKD
FT                   LDTMIDAVLSGNMRADGNSADPRNTGMQGALERLDHLADHISKLNTTMGAYHNTIDGVN
FT                   TRVNFLSVNVQSIKSNVIDVDYGEAMMNLMQVQLAYQASLKASTTISQLSLLNYM"
FT   gene            complement(836165..839005)
FT                   /locus_tag="C1336_000800008"
FT                   /note="C1336_000800008 identified by Glimmer3 with a raw
FT                   score of 13.23."
FT   CDS             complement(836165..839005)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800008"
FT                   /product="putative cell division protein"
FT                   /note="C1336_000800008 identified by Glimmer3 with a raw
FT                   score of 13.23. Gene function extrapolated from C8J_0823
FT                   (CP000814.1) after blastn alignment (97.66 percent identity
FT                   over a 342 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30118.1"
FT                   /translation="MLAPSMGEWVYKANLFLFGEFGYYYPFFLLVLNYLYYRKNYKIEN
FT                   FKRRELFGFSLAFFSTLLLFSVFYREFGYILEIVYGFFSIILGHTGSGIFALLLLLFSL
FT                   ILLFPKFAKEILKKELDFTFLLKVEQAFKSLLMRVFGGENEKEDVGKSEPMAPKLNILQ
FT                   DSIYENLQINKKEKTNNLEQIIKDCNINASKNSITTAKENFEKLKNQILDETIEIDTQS
FT                   LKESRSFVYEHSQQVRNFAQKASKMSISLDEDFNFISEEGVDMIPERFLKPKKLEDIKQ
FT                   IDTNKNLDEPSYKRKNIEIPVSKQEVKPKIFTKELELRENLIKKEKLEQEYKAYQNEIL
FT                   ENKVKQEIKKLEEYDAINSSNIIEGNKYSFNNSKTIKTETEESNKINENKNPDKADNIF
FT                   EFTPIVEELNHPYIEPTPIKNINEIVIEEKNTLDFIQNTEIKIDNEKTNEQEIKLQKAV
FT                   LAKEIAINQALLREIEQGEIEKPKDFTLPPLDFLANPKEHRQEINESEIDKKIYNLLEK
FT                   LRRFKIGGDVISTYVGPVVTTFEFRPSADVKVSRILNLQDDLTMALMAKSIRIQAPIPG
FT                   KDVVGIEVPNDEIQTIYLREILQSEVFKNAKSPLTIALGKDIVGNAFVTDLKKLPHLLI
FT                   AGTTGSGKSVGINSMLLSLLYRNSPKTLRLMMIDPKMLEFSIYNDIPHLLTPVITDPKK
FT                   AVNALSNMVAEMERRYRLMADAKTKNIENYNEKMKELGSEELPFIVVIIDELADLMMTA
FT                   GKDVEFYIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRISYKVGQKIDSKVI
FT                   LDAMGAESLLGRGDCLFTPPGTSSIVRLHAPFASEFEIEKIVDFLKDQQSVEYDESFLK
FT                   DQQSVGVTTNESFDGEVDELYEEAKRVILEDGKTSISYLQRRLKIGYNRSANIIEQLTQ
FT                   NGILSEPDAKGQREIL"
FT   gene            835807..836079
FT                   /locus_tag="C1336_000800009"
FT                   /note="C1336_000800009 identified by Glimmer3 with a raw
FT                   score of 9.31."
FT   CDS             835807..836079
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800009"
FT                   /product="ribosomal protein S15"
FT                   /note="C1336_000800009 identified by Glimmer3 with a raw
FT                   score of 9.31. Gene function extrapolated from
FT                   CJJ81176_0892 (CP000538.1) after blastn alignment (99.63
FT                   percent identity over a 273 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30119.1"
FT                   /translation="MALDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLKI
FT                   YKKDFSSRLGLLKLVGQRKRLLSYLKRKDYNSYSKLITELNLRDK"
FT   gene            complement(835221..835632)
FT                   /locus_tag="C1336_000800068"
FT                   /note="Features C1336_000800010, C1336_000800011 joined to
FT                   form C1336_000800068 to correct 454 sequencing error
FT                   (C1336_000800010 identified by Glimmer3 with a raw score of
FT                   12.85, C1336_000800011 identified by Glimmer3 with a raw
FT                   score of 7.56)."
FT   CDS             complement(join(835221..835385,835387..835632))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800068"
FT                   /product="RrF2 family protein, putative"
FT                   /note="Features C1336_000800010, C1336_000800011 joined to
FT                   form C1336_000800068 to correct 454 sequencing error
FT                   (C1336_000800010 identified by Glimmer3 with a raw score of
FT                   12.85, C1336_000800011 identified by Glimmer3 with a raw
FT                   score of 7.56). Gene function extrapolated from
FT                   CJJ81176_0891 (CP000538.1) after blastn alignment (98.30
FT                   percent identity over a 411 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30120.1"
FT                   /translation="MLFTKASEYALLSLIYISQKETPQDVDSLALELDIPKSFLAKILQ
FT                   TLAKDGLLKSFKGAKGGFALIKEPNQYTIKEIVNSAEKKDISVFECSGGTCPNNKEKNC
FT                   TLMPMLVNLQNKVDEFLDSITLEDIMKNNGKK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(833060..835234)
FT                   /locus_tag="C1336_000800012"
FT                   /note="C1336_000800012 identified by Glimmer3 with a raw
FT                   score of 12.25."
FT   CDS             complement(833060..835234)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800012"
FT                   /product="flagellar biosynthesis protein FlhA"
FT                   /note="C1336_000800012 identified by Glimmer3 with a raw
FT                   score of 12.25. Gene function extrapolated from C8J_0820
FT                   (CP000814.1) after blastn alignment (98.40 percent identity
FT                   over a 2130 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30121.1"
FT                   /translation="MAKNKIVDLVFPFLGPLIAPVLKAKSLTIVGFLVCILAIIIVPLP
FT                   SPILDFFLALSIALSVLIILISIYIPKPTDLTTFPTLILIITLFRLSLNIATTRMILSE
FT                   GQNGPEAVSEIIAAFGEFVVGGNMVIGVIVFCILVLINFMVVTKGSTRVSEVQARFTLD
FT                   AMPGKQMAIDADLNAGLIDEQTARARRQEVIAEANFYGAMDGSSKFIKGDAVAGIIITI
FT                   INIIGGFLIGSFQHDMALSDAASTYTILTIGDGLVSQIPGLITSTATAIIITRASKDEE
FT                   NFAEGTLTQLLSEYRTLLIVGFVLFIFALVPGLPTLSLGFMALVFLSLGYLTKQVKEGK
FT                   IDITTVKKSKPSAAAASQSGAGGTTAAPAKKSEEEILKEEEHKINDILKVEILELELGY
FT                   GLIKLAENELTERIRSMRRSIAESLGFLMPKIRIRDNLRLKPNEYSFKLKGVSIASAEI
FT                   YPDKYLAMDSGFITEEIEGIATKEPAFNSDALWIDANLKDEATLNGYIVIDPASVISTH
FT                   MSELIKAHASELLTRQEVQNLLDKVKNDYPIIVEGALGVAPVSLIQKILKDLLKHHIPI
FT                   KDMLTILESVSDIAEVSKSFDMIIEHVRASLARMITNMYLDDKGNLDIFILDSASSAVL
FT                   MENVQFRDGSYHLPLSVAQTGTLVDTLRAEVAAVANGRIKPFILCVEPQLRKFIADICY
FT                   NFSINIVVLSFAEIAENTNFNTEGIIRIEL"
FT   gene            complement(832005..833051)
FT                   /locus_tag="C1336_000800013"
FT                   /note="C1336_000800013 identified by Glimmer3 with a raw
FT                   score of 12.29."
FT   CDS             complement(832005..833051)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800013"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800013 identified by Glimmer3 with a raw
FT                   score of 12.29. Gene function extrapolated from
FT                   CJJ81176_0889 (CP000538.1) after blastn alignment (98.60
FT                   percent identity over a 786 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30122.1"
FT                   /translation="MKIYHLSHTDLDGYACQFVVNFYFKNVKFYNSNYGKEINENFNSI
FT                   IGDIEKDENFGKAIILITDLNLNLNQCEEFEKICKEKNIKIFLLDHHQSGEECAQKYSW
FT                   YLLDSKRCATKIVYDFFSKICTPVLKLSKFVDVVNAVDIWLSEDENFELGKVFLGLIAN
FT                   AKEINRVMFKESQIDYMFFLLDKAWKFIGKENANILLDNATHFIKKDYFARKNDDTLSN
FT                   LISYFVVEKLSELKENFSIEYEGHKGILTSNIGNTSVIGNDFLVKNPDYDFFIDVSSRK
FT                   TLSFRANGKIDVSLMAKNLVGGGGHKNASGGLFATFKDGANYNHIKAQIIDLIKSKELK
FT                   KENNESKQ"
FT   gene            complement(831779..832021)
FT                   /locus_tag="C1336_000800014"
FT                   /note="C1336_000800014 identified by Glimmer3 with a raw
FT                   score of 11.23."
FT   CDS             complement(831779..832021)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800014"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800014 identified by Glimmer3 with a raw
FT                   score of 11.23. Gene function extrapolated from C8J_0818
FT                   (CP000814.1) after blastn alignment (98.70 percent identity
FT                   over a 230 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30123.1"
FT                   /translation="MNQNNNKTLKNELEDLQYELSIVLEAMLLYAGVKREKLENAIEAY
FT                   IDNIDNVLENSNKEGVDEILEVVEFLKNKYKDFFQ"
FT   gene            complement(831150..831782)
FT                   /locus_tag="C1336_000800015"
FT                   /note="C1336_000800015 identified by Glimmer3 with a raw
FT                   score of 9.76."
FT   CDS             complement(831150..831782)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800015"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800015 identified by Glimmer3 with a raw
FT                   score of 9.76. Gene function extrapolated from
FT                   CJJ81176_0887 (CP000538.1) after blastn alignment (98.03
FT                   percent identity over a 305 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30124.1"
FT                   /translation="MKKCILFFFSLYSLSFANIYEKLNDFAYEKKPNKDFKIQEVKLVQ
FT                   FSQENKDCLELLIEAGQVRILNSYNSCQKLSKDKSFQKFLNEDFLKLYKNNGYLINENL
FT                   QNLKNTMQDIMIYYKLRYSFSKDVKDMSKDKNLDVLNIDEKDGGTLLYKINNQACVGIE
FT                   LTRHDSRMAMKIYGIENLDKECKLFIQSPSFKDLSYTKKDFKWYYLE"
FT   gene            831022..831162
FT                   /locus_tag="C1336_000800016"
FT                   /note="C1336_000800016 identified by Glimmer3 with a raw
FT                   score of 10.75."
FT   CDS             831022..831162
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800016"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800016 identified by Glimmer3 with a raw
FT                   score of 10.75. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30125.1"
FT                   /translation="MKNLSIQEKKDLDNCVFQNLGRQDTFTLSAIFKNFYLKIKAFIYS
FT                   K"
FT   gene            complement(829833..830819)
FT                   /locus_tag="C1336_000800017"
FT                   /note="C1336_000800017 identified by Glimmer3 with a raw
FT                   score of 13.24."
FT   CDS             complement(829833..830819)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800017"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800017 identified by Glimmer3 with a raw
FT                   score of 13.24. Gene function extrapolated from Cj0873c
FT                   (AL111168.1) after blastn alignment (99.06 percent identity
FT                   over a 213 bp alignment). Similar to Cj0873c."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30126.1"
FT                   /translation="MNKFSIVLTLLLCGSCALALDPNLEKTKSATGIDLPTAKWNLPKA
FT                   LNEDGTIDETKMPKNSEYSKMVILGNKILNETSKYVGPQAKDPKKRFAGNNLSCSSCHA
FT                   NGGSVQNQSGFVGIWARFPQYNARGDKVITLADRINGCFERSMNGKRMPSDAPEMKAVL
FT                   TYMQWLSQGVPVGAKIEGQGLKKIDFISRAADPKKGKAIYMDKCAVCHQENGLGLKNED
FT                   SAGAYYLYPPLWGNDSYNTGAGMYRLIKAASYIKENMPQGAPDLSLEDAYDVAAYMNSQ
FT                   ARPIKANRDKDFPDRKVKPLDMDVGPYDDSFSTTQHRYGPYTNMIKK"
FT   gene            829157..829798
FT                   /locus_tag="C1336_000800018"
FT                   /note="C1336_000800018 identified by Glimmer3 with a raw
FT                   score of 11.65."
FT   CDS             829157..829798
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800018"
FT                   /product="thiol:disulfide interchange protein DsbA,
FT                   putative"
FT                   /note="C1336_000800018 identified by Glimmer3 with a raw
FT                   score of 11.65. Gene function extrapolated from CJE0954
FT                   (CP000025.1) after blastn alignment (99.56 percent identity
FT                   over a 229 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30127.1"
FT                   /translation="MRNFFCKFVLALVFCSSFALANNSFITLNPNLPNSENSVIEAFSY
FT                   KCIHCYNHHKFGTLEKLREAFPNLHFKLYPVSLMNGDFSKEMNELFAFAQYKDEQNGKD
FT                   ASYSDSLSHKLADVYFVSYFLNKQRNFSNLDEFYDIGLKAMNVNKNEVLNFLNTPKAKE
FT                   ILSEFQRANDIAKTYGTPAFVVNGKYQINPSAINSMQDLEDLVKKLSNMK"
FT   gene            827209..829071
FT                   /locus_tag="C1336_000800019"
FT                   /note="C1336_000800019 identified by Glimmer3 with a raw
FT                   score of 12.48."
FT   CDS             827209..829071
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800019"
FT                   /product="arylsulfate sulfotransferase, degenerate"
FT                   /note="C1336_000800019 identified by Glimmer3 with a raw
FT                   score of 12.48. Gene function extrapolated from
FT                   CJJ81176_0882 (CP000538.1) after blastn alignment (99.03
FT                   percent identity over a 1863 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30128.1"
FT                   /translation="MRLSKTLCMALLAGSTLLAPNALMAMGGPSGAKIDWQIQGQIGAI
FT                   KMNPYGLSPLTAIIMDNGYVLSDIKVTIVPKPNGQTISYNVNSKMAKTYGGIPIFGLYP
FT                   SYLNTVKVSYTKTANGKSQKVIDEIYKITTPGVSIEPSGSTDQRGTPFENVKVLKMDPK
FT                   FSDRLYLVNNAPGKQSGKGSQSVWNNPVGGAMEWDENSNVFIIDTKGEIRWYFDNDKLM
FT                   NWDNIYNRGIMMGFHQNKDGALTWGFGQRYVKYDILGREIFNRKLPATYIDFSHAMDNM
FT                   QNGHYLLRVASANTLRPDGKHVRTVRDTIIEVDENGNVVDDWRLYEILDPYRSTIIKAL
FT                   DQGAVCLNIDASKAGKTLSDEELAKMDESDKFGDIAGTGIGRNWAHVNSVDYDPSDDSI
FT                   IISSRHQSAVVKIGRDKKIKWILGAHKGWNKEFQKYLLQPVDKNGKKIVCDDDYSKCPG
FT                   YENDNGGFDFTWTQHTGWRIDSKSNKRYIYISVFDNGDARGAEQPAFASQKYSRAVIYK
FT                   IDQQNKTVEQIWEYGKNRGNEWFSPVTSLTQYEPDKDSIMVYSATAGMAFDLSKGVSLG
FT                   EPKPEIDEFNWGAKEPSVQIQFSGSGTGYQAMPFSVDQAFNPKK"
FT   gene            826327..827109
FT                   /locus_tag="C1336_000800020"
FT                   /note="C1336_000800020 identified by Glimmer3 with a raw
FT                   score of 10.86."
FT   CDS             826327..827109
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800020"
FT                   /product="disulfide bond formation protein B"
FT                   /note="C1336_000800020 identified by Glimmer3 with a raw
FT                   score of 10.86. Gene function extrapolated from
FT                   CJJ81176_0881 (CP000538.1) after blastn alignment (98.20
FT                   percent identity over a 777 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30129.1"
FT                   /translation="MKDNCRNFSLSKWQDTRKPWLILIIVTIGLTCIAHFLFQEYLFME
FT                   PCEQCVYIRFDMLVMAIGGMIALINPKNNIIKIFSYGLAFYGIWLGLEHCITLNHIHEV
FT                   VHSENPFAGVDGCREIPIYPFNLPLHEWAPSWFLPTGECGMDTPVVPENAYNHLNAFQK
FT                   FFIGSPPNFENGLYSNGWYLIPSLKFMNMAICCLIAFLCCFIVLFAMFITYVLDKNKPN
FT                   AKIFALVIVILVLVLKFIGEPKNPNQNIASLNHLNQVI"
FT   gene            825653..826315
FT                   /locus_tag="C1336_000800021"
FT                   /note="C1336_000800021 identified by Glimmer3 with a raw
FT                   score of 14.56."
FT   CDS             825653..826315
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800021"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000800021 identified by Glimmer3 with a raw
FT                   score of 14.56. Gene function extrapolated from Cj0864
FT                   (AL111168.1) after blastn alignment (99.57 percent identity
FT                   over a 232 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30130.1"
FT                   /translation="MKFPVKLARSIVVCAFLAGISASALSEGKEYVILKNPIANADNSL
FT                   IEIFSYRCTHCYDHHKFNTMGKVKEKLPNLTYKFYPVSSMGDYGKQANEIFAFAAFKDG
FT                   VNKADPTDKNSLTHKVAEAYFNTYFKKKQRWENGKNPEAFYSVGLKAMNVSKADFENFL
FT                   KTPEAAELLKSYEIANPISQNYGTPAFVVNGKYQIVPSAINSPEALIEITKELSKQK"
FT   gene            complement(823962..825026)
FT                   /locus_tag="C1336_000800022"
FT                   /note="C1336_000800022 identified by Glimmer3 with a raw
FT                   score of 10.11."
FT   CDS             complement(823962..825026)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800022"
FT                   /product="site-specific recombinase, phage integrase
FT                   family"
FT                   /note="C1336_000800022 identified by Glimmer3 with a raw
FT                   score of 10.11. Gene function extrapolated from C8J_0810
FT                   (CP000814.1) after blastn alignment (98.17 percent identity
FT                   over a 383 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30131.1"
FT                   /translation="MKYPLDCEENFEKSFLFWLAKYVKFKLNSLSNKELKNPQALAEVN
FT                   FALAKGVKNIEELDALAKKARNAGLSGINTYFNPLKKVFEYLNFYKLYSLKQIDEELIV
FT                   EVLASITGALSDASKKNYRIAVINFFDFLDKQNEEDEKAHIFNINLKNWAGIAGSKGVK
FT                   LPEFMSEEELKKFLDAIENADFKNNTIRNKLIIKIIIFTGIRVSEAINIKMGDISEEND
FT                   LYIIRIRAKGNKYRVVMIKKELIYDLLKNVSINYMSKDALLFVNKKGTPLTQSYVSRIV
FT                   EQLLFRAGIRKQKNGAHMLRHTFATLLYKKQKDLILVQEALGHASLNTSRIYTHFDNDK
FT                   LKLAAQVAKELSDS"
FT   gene            complement(822188..823972)
FT                   /locus_tag="C1336_000800023"
FT                   /note="C1336_000800023 identified by Glimmer3 with a raw
FT                   score of 7.26."
FT   CDS             complement(822188..823972)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800023"
FT                   /product="para-aminobenzoate synthase component I"
FT                   /note="C1336_000800023 identified by Glimmer3 with a raw
FT                   score of 7.26. Gene function extrapolated from Cj0862c
FT                   (AL111168.1) after blastn alignment (99.12 percent identity
FT                   over a 226 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30132.1"
FT                   /translation="MTLENYAVFGGYFYYDLKHTLKAFNHKESKKCFKFIEKYKNDFYI
FT                   LMLADYELYRYFQDKNFTSKKAYLSIFAFKKRKKFQKEDIDEEKFIPEFINFLDQDNYK
FT                   ENFIKVKEAISKGRVYQINLTQNFKFHSKMDSFELFKLLLSRQNTEFKAFIKDETREIL
FT                   SFSPELFFKTKKRKIFTKPMKGTIKRDKDPIKDEENKIFLQNDTKNLSENVMICDLLRN
FT                   DLSKIITKKSLKTKLFEIQSHPTLHQMTSSVQGKLKKNISLYQIFKALFPCGSITGAPK
FT                   LESIKFIKELEQRERGIYCGTIGLIHKNKNKFSVAIRTLEKQDEIYTYSTGSGLVWDSN
FT                   FKDEFEELKLKSAILNPCDFHLFETMYFKNSQILFLKEHLLRLINSALKFNFNTHKLFK
FT                   DFYNILNQKSSYKEYQNFTLFKLDEKIFHKKHSLFYHFPLPFKNPHKEGILKLILYKDG
FT                   RYEFQQSALKQNSNDILLLSDDKINSKSDNLYHKSSLRTFYNQHSYKWHQNLCYDIAFF
FT                   NEKDELCEGSRTNLILEKNSQFYTPQIQSGMLNGVYRNFLINLGLIKEKALFKQDLFEA
FT                   ENIYCINSVRGLKKVKLQ"
FT   gene            complement(821625..822191)
FT                   /locus_tag="C1336_000800024"
FT                   /note="C1336_000800024 identified by Glimmer3 with a raw
FT                   score of 11.26."
FT   CDS             complement(821625..822191)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800024"
FT                   /product="para-aminobenzoate synthase glutamine
FT                   amidotransferase, component II"
FT                   /note="C1336_000800024 identified by Glimmer3 with a raw
FT                   score of 11.26. Gene function extrapolated from CJE0948
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 83 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30133.1"
FT                   /translation="MKKILFIDNYDSFSYTIIYYLKELGFECKVIKNDAFKKAKELEKF
FT                   DFTHLIISPGPHSPKESKLSLKAIKYFKKNKKILGICLGHQCIAEVFGGRVSKIQNPMH
FT                   GKISKLYFKKDPIFKGIKKEIEICLYHSLHISSMPKKCKILAQNSENIIMAIKHKKYPI
FT                   YGLQFHPEAVLTQKGKKILKNFMKL"
FT   gene            complement(818874..821330)
FT                   /locus_tag="C1336_000800025"
FT                   /note="C1336_000800025 identified by Glimmer3 with a raw
FT                   score of 13.32."
FT   CDS             complement(818874..821330)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800025"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800025 identified by Glimmer3 with a raw
FT                   score of 13.32. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30134.1"
FT                   /translation="MIYHNKLVLSAIAASFIVSTGGGLYAQDISDDGKLIQDKNNKSHY
FT                   TYEFNTGDDVKTELGKTKLSGKEPIKHLTIKAGKDQSGELKFTGTTGKKASLGNGYSFD
FT                   LTADSLKFTGDAIGDANIIATNGASTINAKNGVELNKGHIQVGNGTFFNQSFNGSLTIN
FT                   GDLKLTDSSVANFGQANFNVNGKVSAKNTTFEAETLDLSRVTSNGFYIMSATKGFENAV
FT                   SSDKSFTDVSSGNKGALIFHNPLVNISSNLMNQNYAGGIGTITDFDEIAPTTNLDSLYK
FT                   TELVQKGNSLYVDGGFSATKNNRVDFDALNTAIKAEFTKQKTALEALYKNEKGSETGTF
FT                   ATNKKVVNDKITEYNKKDGTIEKSQKAVDATKTALDEANKKGDQEGIKKAREAYNAAVK
FT                   QLENDKKTLSELNNRLAEYNALIEDIKNKTANLNDKINNTKFDIRAGQKGQIFASLAES
FT                   NVGGKLAGTADYIFANGKVINDVERAAQSNAGNSALNAPIGAINMSNDMAISNRLAKFS
FT                   NPYSTVNVASLEDLKFAAGNGIASDSQYAYGARSYDNNVWANVIGGANIIDSKSGALYG
FT                   VSVGYDRLVGEDTILGAYLTYADSKIKTSMVNQESDNLQLGLYSRTLYGNSEFDFKGYA
FT                   QFGWTDQDRFIAGTVNSSDFTRKFLGASGTYGYVFDMGNDFYIKPLAGLNLYYSFTPDY
FT                   NENGAYAQHVQSQSSFDTSIEAGAEFRKYLSKESYIYATPKIEQYIITSGDDYTARFLG
FT                   SPTSFTINGSDKKKTYGSFIVGGDVNIKNQWAFTFSAGVKHLLSGKVNDESETYLSGNI
FT                   GLKYQF"
FT   gene            complement(817454..818710)
FT                   /locus_tag="C1336_000800026"
FT                   /note="C1336_000800026 identified by Glimmer3 with a raw
FT                   score of 15.30."
FT   CDS             complement(817454..818710)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800026"
FT                   /product="UDP-N-acetylglucosamine
FT                   1-carboxyvinyltransferase"
FT                   /note="C1336_000800026 identified by Glimmer3 with a raw
FT                   score of 15.30. Gene function extrapolated from C8J_0805
FT                   (CP000814.1) after blastn alignment (96.74 percent identity
FT                   over a 1257 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30135.1"
FT                   /translation="MTYLEIEGTNHLSGNVAISGAKNAALPLIVSSILAKNEAKINNVP
FT                   NVADIKTLISLLENLGAKVNFQNNSALLNTNTLNQTIAKYDIVRKMRASILTLGPLLAR
FT                   FGHCEVSLPGGCAIGQRPIDLHLLALEKMGANIQIKQGYVVASGNLKGNEILFDKITVT
FT                   GSENIIMAAALAKGKTKLLNVAKEPEVVQLCEVLKDAGLEIKGIGTDELEIYGSDGELL
FT                   EFKEFSVIPDRIEAGTYLCAGAITNSKITLNKVNATHLSAVLAKLHQMGFETLIAEDSI
FT                   TLLPAKEIKPVEIMTSEYPGFPTDMQAQFMTLALKANGTSIIDERLFENRFMHVSELLR
FT                   MGADIKLNGHIATIVGGKELNAADVMATDLRASSALILAALAAKGTSKVHRIYHLDRGY
FT                   ENLEEKFKGLGVKITRLEE"
FT   gene            complement(816297..817457)
FT                   /locus_tag="C1336_000800027"
FT                   /note="C1336_000800027 identified by Glimmer3 with a raw
FT                   score of 15.65."
FT   CDS             complement(816297..817457)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800027"
FT                   /product="molybdopterin biosynthesis MoeA protein,
FT                   putative"
FT                   /note="C1336_000800027 identified by Glimmer3 with a raw
FT                   score of 15.65. Gene function extrapolated from C8J_0804
FT                   (CP000814.1) after blastn alignment (97.24 percent identity
FT                   over a 1161 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30136.1"
FT                   /translation="MKNIFETLKDLEDQISCLDESELISLEKAKDRILAKDLYARKNLP
FT                   SFDNAALDGYAFNYADINEALEIKGTIFAGDKNFYTVAKNECYKIMTGAKMPKNADTIL
FT                   MLEDEYIEENKLIIKKVPKQYNAYRYKGEELKKGEILLQKGTKLNDKHIALLASQGLYK
FT                   IEVIRKIRIGIFSSGNELKEPWQECDEESIYNANALPLLTMLQNASYLGIIKDNFKSTK
FT                   EALENTNFDLLITSGGASVGEADFMEKALDELGFTPLFKGLKARPARPTKLYQKGKNFV
FT                   LILPGNPMAAYLSCFIFAKKIIDLLSGNLDNPLTFYAKMGMDLKLKSGRNNLILGNLEK
FT                   DIFTPFNENKFGSGMILPLIKSEFLLISEENTSELKKGDEITLLKI"
FT   gene            815427..816275
FT                   /locus_tag="C1336_000800028"
FT                   /note="C1336_000800028 identified by Glimmer3 with a raw
FT                   score of 7.25."
FT   CDS             815427..816275
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800028"
FT                   /product="signal peptidase I"
FT                   /note="C1336_000800028 identified by Glimmer3 with a raw
FT                   score of 7.25. Gene function extrapolated from
FT                   CJJ81176_0872 (CP000538.1) after blastn alignment (97.88
FT                   percent identity over a 849 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30137.1"
FT                   /translation="MEFLKRLYKFSQSWTGTVVIVLLVIFFFIQAFVIPSGSMKNTLLV
FT                   GDFLFVKKFSYGIPTPHIPWLEIPVLPDFNKNGHLIKAQGPQRGDIVVFRNPRNEKEHF
FT                   VKRCVGTGGDRIVYANKTLYVRMHEGDEFMKEHYPNDLVTLGGQIYVKEPYKQKGIHYD
FT                   PKKDIESDILRFLSIGDFAMSPTYIKELGNHIGFSGGNAYVFDVPENEYFMMGDNRDYS
FT                   YDSRFWGSVPYKLIVGKPWFVYFSWDKDKNVRWERIGRFVDTLENDEQYIHDHDDEDKL
FT                   S"
FT   gene            814569..815417
FT                   /locus_tag="C1336_000800029"
FT                   /note="C1336_000800029 identified by Glimmer3 with a raw
FT                   score of 14.71."
FT   CDS             814569..815417
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800029"
FT                   /product="folD protein"
FT                   /note="C1336_000800029 identified by Glimmer3 with a raw
FT                   score of 14.71. Gene function extrapolated from
FT                   CJJ81176_0871 (CP000538.1) after blastn alignment (97.75
FT                   percent identity over a 757 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30138.1"
FT                   /translation="MTLLDGKALSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQ
FT                   TYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICK
FT                   DLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLRAYEIDLEGKDAVII
FT                   GASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEG
FT                   VIVIDVGINRLESGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAILLENTVKSAKNRL
FT                   N"
FT   gene            complement(814142..814489)
FT                   /locus_tag="C1336_000800030"
FT                   /note="C1336_000800030 identified by Glimmer3 with a raw
FT                   score of 11.69."
FT   CDS             complement(814142..814489)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800030"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000800030 identified by Glimmer3 with a raw
FT                   score of 11.69. Gene function extrapolated from C8J_0801
FT                   (CP000814.1) after blastn alignment (98.28 percent identity
FT                   over a 348 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30139.1"
FT                   /translation="MKIVLMFFLFSINLFGADFITLKEYSKMLYENPRGISCKECHGTD
FT                   GSEQILGYFMKNGIKTAYKVPSIQNLSFENFKNSLNQSKDAKSIMPNYSLTNDEIVTLY
FT                   NYIKQFSKEEK"
FT   gene            complement(812871..814145)
FT                   /locus_tag="C1336_000800031"
FT                   /note="C1336_000800031 identified by Glimmer3 with a raw
FT                   score of 14.07."
FT   CDS             complement(812871..814145)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800031"
FT                   /product="glutamate-1-semialdehyde-2,1-aminomutase"
FT                   /note="C1336_000800031 identified by Glimmer3 with a raw
FT                   score of 14.07. Gene function extrapolated from CJE0940
FT                   (CP000025.1) after blastn alignment (98.12 percent identity
FT                   over a 1275 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30140.1"
FT                   /translation="MTNKKAFKEACKFIAGGVNSPVRAFANVQSEPKFISHGKGAYIFD
FT                   IDGNSYIDYVQSWGPLLFGHCDKDIQKACQKALHKGSSFGAPTLLETELAKLVLSDFPH
FT                   LEKIRFVSSGTEATMSAIRLARGFTKKDKILKFEGCYHGHSDSLLVSAGSGAATFNSPS
FT                   SLGVLEDVAKHTLVAKYNDINSVKELFEKNKDIACVIIEPIAGNMGLVPAKQDFLEELA
FT                   KICKNNQTLLIFDEVMSGYRASYLGSYGINHIQADIITFGKVIGGGLPAAAFASRAEIM
FT                   DILSPLGGVYQAGTLSGNPLAMAAGIASLTKAKKKTKLYDKLGKLAKKLTQGMKKLADE
FT                   KGLPLQVCHVGSMFGYFFTKNPVSNYQDALKSDLALFSKFHKNMLENGIYLAPSQFETG
FT                   FICSKMDDKIVDTTLEAVRESFKRI"
FT   gene            complement(812545..812874)
FT                   /locus_tag="C1336_000800032"
FT                   /note="C1336_000800032 identified by Glimmer3 with a raw
FT                   score of 15.86."
FT   CDS             complement(812545..812874)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800032"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800032 identified by Glimmer3 with a raw
FT                   score of 15.86. Gene function extrapolated from
FT                   CJJ81176_0868 (CP000538.1) after blastn alignment (99.30
FT                   percent identity over a 143 bp alignment) - for clarity,
FT                   the original product name 'membrane protein, putative' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30141.1"
FT                   /translation="MSNILKEEKNHLENSNSKRQKIIRKTLEAADGLSLGISMVVAVFI
FT                   GVGIGYLLKKFTPYPWLFWLGVFWGISAAILNVYKAYKVQVKSYEEFKERDELIKEKIQ
FT                   KEKNK"
FT   gene            complement(812042..812545)
FT                   /locus_tag="C1336_000800033"
FT                   /note="C1336_000800033 identified by Glimmer3 with a raw
FT                   score of 6.35."
FT   CDS             complement(812042..812545)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800033"
FT                   /product="putative membrane protein"
FT                   /note="C1336_000800033 identified by Glimmer3 with a raw
FT                   score of 6.35. Gene function extrapolated from
FT                   JJD26997_1000 (CP000768.1) after blastn alignment (99.49
FT                   percent identity over a 198 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30142.1"
FT                   /translation="MEHKKALFCIFAIIHLFFWIIFLSLNHFKLDTFLSYEIAFFSILL
FT                   IIFASYLNYKKVIIKKSKNYEKDFNFISSLFIKKEQNLSKIIHFKVLKDDLKPNIKEKI
FT                   HFFAMFFTLFKLMAYVILVAGFLFLHRQDKLDIFAYICGISSLLVCVFIFILYIKKYES
FT                   KKNY"
FT   gene            complement(810877..812037)
FT                   /locus_tag="C1336_000800034"
FT                   /note="C1336_000800034 identified by Glimmer3 with a raw
FT                   score of 13.26."
FT   CDS             complement(810877..812037)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800034"
FT                   /product="major facilitator family protein"
FT                   /note="C1336_000800034 identified by Glimmer3 with a raw
FT                   score of 13.26. Gene function extrapolated from
FT                   JJD26997_0999 (CP000768.1) after blastn alignment (97.85
FT                   percent identity over a 606 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30143.1"
FT                   /translation="MTALFAGMAFLFAGNALIVSSIGVILKENGESSLAVGVVSSCFFI
FT                   GALVGTISAHKIISRIGHIRSFGLFGAIFGISAMLHTVSENLIFWAVLRFFIGICYYGL
FT                   LIVIESWLNEKSKNAIRSRILGFYEIVFYLAFGIGVLIIALNLSKHSVFILSATLILLS
FT                   SLPLNLIKIKEPVLPAPSPISIPKIFDIAPLAIVTSFIAGMLINGFFSMASLFILLQGF
FT                   DAKAVSYFVFCGVLGGFIAQTIIGTISDKLGRKFAIITCASIGFITMLIFIFFKLHLYM
FT                   QYFLGITLGVGIFCLYALALARANDVLVSKNKGVELGRGVLFCYSLGSLFGPLILGFLM
FT                   QYFEIKGFIWFYIVSLAFLILFAINKPNILNKKFKKKPGNMVIFDD"
FT   gene            complement(808725..810884)
FT                   /locus_tag="C1336_000800035"
FT                   /note="C1336_000800035 identified by Glimmer3 with a raw
FT                   score of 14.32."
FT   CDS             complement(808725..810884)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800035"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800035 identified by Glimmer3 with a raw
FT                   score of 14.32. Gene function extrapolated from C8J_0796
FT                   (CP000814.1) after blastn alignment (99.59 percent identity
FT                   over a 242 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30144.1"
FT                   /translation="MINTQLASQIANTQKNDLKVDNSTSKDKTNLKDNPKEALAQALKQ
FT                   NLGLSKDASSEEILAKFVQNETGTKLKELVNKLLDQINAQKNPDSPVLKQGKNLNLAPN
FT                   FANELKTLSTELAKSDTFTQVLDRLNQILKPASEIKNNNLAPLFKNSGVFLEAKLKDAL
FT                   NEELLPKSFHSLLSTIKGLSSEKLSVQIAQLANTNLSPKDTLKELKNIINSSKNENKQI
FT                   LNQSSFKALLNLSSKLENFKNYISKNPSHAQEKITPIANKILKELNSIKNDFFKALNKP
FT                   ENLMIKDPNILKQTATAFEKLENTLKNILGNQAFKIQDKENILENLLSNKENIKEEKLN
FT                   HNTKNQDEEKHIKASKEDENLNSGIKTHEEDTQDTKNDIQNNETENKPDNDIKNSTPNQ
FT                   EKIKDEKQEKSKENIKENPKFYETKIENKTSINTNTNTSNPNTNNTQNLNNTQNIQSNN
FT                   NQTMQNIFKNQEFIKQNIVKNLAFNVENLDLEQVQDLSKNLNNLSRRLNESLKELEPYT
FT                   QNAKLNQAELKNLEHKLNLSTKDLTQIKPKTEQDIAESLHHDVKSTLLQISNLAKNEGN
FT                   EAVYNQANRLLAQIEINQLMSLANDSINTYLPFSWDDLNDSKIMFRRGKKDKFFAQIKL
FT                   EFAKLGDLEILISLNNEKYIDINIMAENIEFRKTIYENAHELKRNINKAGLLSANFFVG
FT                   DIIRSKFDTRNMKNLDLEMGMDKKV"
FT   gene            complement(808447..808728)
FT                   /locus_tag="C1336_000800036"
FT                   /note="C1336_000800036 identified by Glimmer3 with a raw
FT                   score of 19.48."
FT   CDS             complement(808447..808728)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800036"
FT                   /product="putative flagellar biosynthesis protein"
FT                   /note="C1336_000800036 identified by Glimmer3 with a raw
FT                   score of 19.48. Gene function extrapolated from C8J_0795
FT                   (CP000814.1) after blastn alignment (98.64 percent identity
FT                   over a 220 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30145.1"
FT                   /translation="MSKIKRSIKKAVALGYQKEKNSAPKVLASGKGESAAKIISLAKEH
FT                   GVPIKEDEDLIEILSKLDLGDEIPPNMYKAVAEVFAFIYQMANKTPKN"
FT   gene            807650..808450
FT                   /locus_tag="C1336_000800037"
FT                   /note="C1336_000800037 identified by Glimmer3 with a raw
FT                   score of 14.69."
FT   CDS             807650..808450
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800037"
FT                   /product="phosphatidylserine decarboxylase"
FT                   /note="C1336_000800037 identified by Glimmer3 with a raw
FT                   score of 14.69. Gene function extrapolated from
FT                   CJJ81176_0863 (CP000538.1) after blastn alignment (98.84
FT                   percent identity over a 258 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30146.1"
FT                   /translation="MSFSKESSRLFGFVAGVKFPKMIQKVINENYVKYFNIDMSEFKAP
FT                   CEYESLNALFTRTLQIPRKLEEGFISPSDGKILECGSTFLANEEHFAFSIKGHTYSVEE
FT                   LLKDSFEKDELKNGLDYVNIYLSPKDYHRYHSPCDMQILSATYTSGVLYSVNEKHLERI
FT                   SNLYVKNERVSLKCQNEKGIFWLVFVGAQNVGKMRFNFDISIQTNAKISHNFTRKYENL
FT                   NLKKGEELGNFELGSTIVLISQKGLLTFNLKAGQGIKFGEKIAD"
FT   gene            806529..807653
FT                   /locus_tag="C1336_000800038"
FT                   /note="C1336_000800038 identified by Glimmer3 with a raw
FT                   score of 11.95."
FT   CDS             806529..807653
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800038"
FT                   /product="Ser/Thr protein phosphatase family protein"
FT                   /note="C1336_000800038 identified by Glimmer3 with a raw
FT                   score of 11.95. Gene function extrapolated from C8J_0793
FT                   (CP000814.1) after blastn alignment (98.68 percent identity
FT                   over a 151 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30147.1"
FT                   /translation="MIFLIFSFIVLLIFGLANVYIYKRLIKKITLFKYFYKIFVFIFIV
FT                   LFLAQAVFLIFRRDEYLSDTWYEILAMLYAPTYCLFFMTLAWDFIKLILALIGKRDKKY
FT                   NLILRLIFEFFLIVLSVFLIYVSINNALKTPEVKSVDVEIPNLKQDLKIAMLTDIHLGK
FT                   NLHENFLDKLITKVNLQSPDMVVIVGDLIDTNPKDLKNYISKLNDFNSTYGTFYALGNH
FT                   EYYHGINEVLDLLRKHTNMKILVNQNLDLDFINIAGLGDLAGLDKGLYAPDLARIKVDL
FT                   NTSKPSVLLTHQPKTALLYDLSDFDLVLSGHTHGGQIFPFMFLVKLQQGFVHGLYDLGE
FT                   KTKLYVSSGAGFWGPSLRVFAPSEIVILNLKGKK"
FT   gene            complement(805148..806443)
FT                   /locus_tag="C1336_000800039"
FT                   /note="C1336_000800039 identified by Glimmer3 with a raw
FT                   score of 15.08."
FT   CDS             complement(805148..806443)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800039"
FT                   /product="glutamyl-tRNA synthetase"
FT                   /note="C1336_000800039 identified by Glimmer3 with a raw
FT                   score of 15.08. Gene function extrapolated from Cj0845c
FT                   (AL111168.1) after blastn alignment (99.03 percent identity
FT                   over a 103 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30148.1"
FT                   /translation="MYRFAPSPTGDMHIGNLRAAIFNYICARQKNMDFILRIEDTDKAR
FT                   NIAGKEEEIKEILNLFSISWQHYYIQSENLKFHRQMALKLISEKKAFACFCTEEELEAK
FT                   KELAKKQGKAYRYDGTCEKLADIDVLDCEKPFVIRLKKPTHTMKFTDFIKGELSFEPEN
FT                   IDSFVIMRTDKTPTYNFACAVDDMLENVTCIIRGEDHVSNTPKQEHIRASLDYNKAITY
FT                   AHLPIILNEEGVKMSKREAHSSVKWLLESGILPSAIANYLIMLGNKTPCEIFTLEEAIK
FT                   WFDISKVSKAPARFDLKKLLQINREHIKMIKDDELNKTLDLNKDLAQLAKFYTQEASTT
FT                   KELKEKMRAIFNTKDFGEFETECKILKELLKDIELFENYEDFKNELLSKSGLKGKKFFM
FT                   PLRIILTGNIHGPELSDLYPYIKNFIHELARI"
FT   gene            complement(804864..805145)
FT                   /locus_tag="C1336_000800040"
FT                   /note="C1336_000800040 identified by Glimmer3 with a raw
FT                   score of 4.99."
FT   CDS             complement(804864..805145)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800040"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000800040 identified by Glimmer3 with a raw
FT                   score of 4.99. Gene function extrapolated from Cj0844c
FT                   (AL111168.1) after blastn alignment (97.87 percent identity
FT                   over a 282 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30149.1"
FT                   /translation="MVIDSFIISIFQVLQIVINIYTWIIIITALLSWVNPDPYNPIVQI
FT                   LYKLSYPAYALVRKIPTRIGNIDLAPLIIVLALQFLGIFLGNILRSIL"
FT   gene            complement(803242..804867)
FT                   /locus_tag="C1336_000800041"
FT                   /note="C1336_000800041 identified by Glimmer3 with a raw
FT                   score of 6.48."
FT   CDS             complement(803242..804867)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800041"
FT                   /product="soluble lytic murein transglycosylase, putative"
FT                   /note="C1336_000800041 identified by Glimmer3 with a raw
FT                   score of 6.48. Gene function extrapolated from
FT                   CJJ81176_0859 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 90 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30150.1"
FT                   /translation="MIKKILVFLFIFSSLNATQYSIEKLKKEENSLAKDYYIYRLLEKN
FT                   KISKKDAQDLNSHIFRYIGKIKSELEKIIPLKPYINPKYAKCYTYTANTILDANLTCQS
FT                   VRLNSLVFIASLNSKDRTTLAQTFKNQRPDLTNLLLAFNTSDPMSYIVQKEDINGFFKL
FT                   YNYSKKYDLDLNTSLVNKLPNHIGFKDFAQNIIIKKENPKFRHSMLEINPENVSEDSAF
FT                   YLGVNALTYDKTELAYDFFKKAAQSFKSQSNKDNAIFWMWLIKNNEEDLKTLSQSSSLN
FT                   IYSLYAKELTNTPFPKIESLNPSKKKNNFNMQDPFAWQKINKQIRDANASQLDVLAKEF
FT                   DTQETLPIYAYILERKNNFKKHYFIMPYYDNIKDYNKTRQALILAIARQESRFIPTAIS
FT                   VSYALGMMQFMPFLANHIGEKELKIPNFDQDFMFKPEIAYYFGNYHLNYLESRLKSPLF
FT                   VAYAYNGGIGFTNRMLARNDMFKTGKFEPFLSMELVPYQESRIYGKKVLANYIVYRHLL
FT                   NDSIKISDIFENLIQNKANDLNKS"
FT                   /artificial_location="low-quality sequence region"
FT   gene            802860..803345
FT                   /locus_tag="C1336_000800042"
FT                   /note="C1336_000800042 identified by Glimmer3 with a raw
FT                   score of 5.08."
FT   CDS             802860..803345
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800042"
FT                   /product="soluble lytic murein transglycosylase, putative"
FT                   /note="C1336_000800042 identified by Glimmer3 with a raw
FT                   score of 5.08. Gene function extrapolated from C8J_0790
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 104 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30151.1"
FT                   /translation="MKIYSVILGAFLLGACSLKDQAIVDTNLKSQTLMFTQKYKITQDK
FT                   INAIVTMSYLNPILDKISKDDVLALSFTPNTLKIQNLEVFINNKKANIEKLDDEYLKYI
FT                   IQNNYTDYFKVSLPSVKEETRLVAKICLDHLPCFELNFQKYPKSLYYRSEDVDTQYN"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(802272..802763)
FT                   /locus_tag="C1336_000800043"
FT                   /note="C1336_000800043 identified by Glimmer3 with a raw
FT                   score of 14.99."
FT   CDS             complement(802272..802763)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800043"
FT                   /product="putative molybdopterin-guanine dinucleotide
FT                   biosynthesis protein"
FT                   /note="C1336_000800043 identified by Glimmer3 with a raw
FT                   score of 14.99. Gene function extrapolated from Cj0841c
FT                   (AL111168.1) after blastn alignment (98.37 percent identity
FT                   over a 492 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30152.1"
FT                   /translation="MKQLIIAFSGPSNSGKTTLITKIADNFLQQNLKVLIIKHDPADKA
FT                   QFDFNGKDSFKFFQSGAEVMVLSPTRTTFFSHENRDILKALKLSPDFDICLVEGLKTLD
FT                   LPRISVFCKEIDESYFTFSNAIASYEKISHPYLTWLDLNDIQAICQYILKNAKNLQGEL
FT                   "
FT   gene            complement(801428..802270)
FT                   /locus_tag="C1336_000800044"
FT                   /note="C1336_000800044 identified by Glimmer3 with a raw
FT                   score of 16.64."
FT   CDS             complement(801428..802270)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800044"
FT                   /product="fructose-1,6-bisphosphatase"
FT                   /note="C1336_000800044 identified by Glimmer3 with a raw
FT                   score of 16.64. Gene function extrapolated from
FT                   CJJ81176_0857 (CP000538.1) after blastn alignment (97.50
FT                   percent identity over a 839 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30153.1"
FT                   /translation="MQEVISYIQKAVLEISNALKFPDTSYSQNQNFTGDTQLKFDVLSD
FT                   EIITKTLSQCSSIKAIISEEKDEILTLNKKANFIVAYDPLDGSSLMDVNFAIGSIFAIY
FT                   EEKANAKNLRAALYSMYGARLELVICKDQPKLYRLNANNEFIFIKDLKMNEKGKINATG
FT                   GTQKFWEEKHAKFVKSLFDEGYRLRYSGAMVSDINQILLKGGGIFSYPATQDAPNGKLR
FT                   AFFEVFPLAFIIEKAGGKTTNGKNHSLLELEFDKIHATTPCFFGSEYEISKLLKAYNE"
FT   gene            complement(801238..801435)
FT                   /locus_tag="C1336_000800045"
FT                   /note="C1336_000800045 identified by Glimmer3 with a raw
FT                   score of 4.68."
FT   CDS             complement(801238..801435)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800045"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800045 identified by Glimmer3 with a raw
FT                   score of 4.68. Gene function extrapolated from C8J_0786
FT                   (CP000814.1) after blastn alignment (98.40 percent identity
FT                   over a 187 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30154.1"
FT                   /translation="MNETRDEFEQDMDKKKEILLSCQNSKNLNSCYNCNEIFNCQTRKN
FT                   YVDAVYNSMSKGKTEGGFDF"
FT   gene            complement(799342..801228)
FT                   /locus_tag="C1336_000800046"
FT                   /note="C1336_000800046 identified by Glimmer3 with a raw
FT                   score of 13.84."
FT   CDS             complement(799342..801228)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800046"
FT                   /product="methionyl-tRNA synthetase"
FT                   /note="C1336_000800046 identified by Glimmer3 with a raw
FT                   score of 13.84. Gene function extrapolated from CJE0925
FT                   (CP000025.1) after blastn alignment (99.25 percent identity
FT                   over a 534 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30155.1"
FT                   /translation="MRYITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETRFLTG
FT                   TDEHGQKIEEAAKLRNSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAM
FT                   FLKMWQKGDIYKDEYEGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLSK
FT                   YQDKILQWYEEKDPILPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHII
FT                   YVWLDALFIYISSLDFQSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKF
FT                   IGAHGWWTKEGEKMSKSKGNVVKPKEIVDAYGSEAFRYFLLREVPFGNDGDFSENMLIN
FT                   RINAELSNEFGNLLNRIIGMSTKYSQGNISKESVLKFYNAELNQVKEHLNLAVEFLENL
FT                   QCNRYLEELFKALSVANLAISKYEPWNLIKENKHEQANALVALCANILAKTSLLLSPAL
FT                   PKSCQKVALALNFEISSVNYAKMILDNKLLDFKANPCEALFPKVEKALLKQEIKEEPKK
FT                   EESPKIKIDDFAKIEIKVAKVLDCQNIEGSEKLLKFQLELDNKEIRQVLSGIAKYYKAS
FT                   DLIGKQVCVISNLKKAKIFGHESDGMILSAKSGDKLVLITPEQLVQNGSLVG"
FT   gene            complement(798397..799338)
FT                   /locus_tag="C1336_000800047"
FT                   /note="C1336_000800047 identified by Glimmer3 with a raw
FT                   score of 10.59."
FT   CDS             complement(798397..799338)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800047"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800047 identified by Glimmer3 with a raw
FT                   score of 10.59. Gene function extrapolated from C8J_0784
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 125 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30156.1"
FT                   /translation="MQISNLGELLNATLVHEGSVLSVEGFAINLNELKAGFAFFNNDKK
FT                   EITQAVKKGAYAIITENDITIEDKDIFYFRVENLEQALVRFLRFFCEDKECEFLLFKSY
FT                   ELSLCKAFYFNILKGNIFADFEKLIKAKKGEIFCYCEENYLNKLCAYSHSLKDANFTLL
FT                   SRSSFFFTTLICENLYFKNLNLPFFYANSFAKIISFLKEKNQKIIFDFNKIDDFKIYFI
FT                   DDKFEITPFGSSSQAFIVSNNQNTFEFWKEKFKNIKDFKIASKNSLFCDFSYNQLSDLR
FT                   KLKNFKYCLILENYDIFEQEFENKENQTPSLF"
FT   gene            797953..798405
FT                   /locus_tag="C1336_000800048"
FT                   /note="C1336_000800048 identified by Glimmer3 with a raw
FT                   score of 12.02."
FT   CDS             797953..798405
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800048"
FT                   /product="methylated-DNA--protein-cysteine
FT                   methyltransferase"
FT                   /note="C1336_000800048 identified by Glimmer3 with a raw
FT                   score of 12.02. Gene function extrapolated from C8J_0783
FT                   (CP000814.1) after blastn alignment (99.34 percent identity
FT                   over a 453 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30157.1"
FT                   /translation="MFKVYYKMPLCYLSLHSDGKFLTRVDFCDNKRSEKNCSLLDLAKY
FT                   ELDLYFTHKLRKFSIPVLIQGTDFESKVYKALMKIPYGKIATYKDIAEKINHPKAFRAV
FT                   GNANSKNQIPIFIPCHRVIASNGIGGYNGGLEIKRFLLENEGVNLK"
FT   gene            complement(795352..797898)
FT                   /locus_tag="C1336_000800049"
FT                   /note="C1336_000800049 identified by Glimmer3 with a raw
FT                   score of 14.65."
FT   CDS             complement(795352..797898)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800049"
FT                   /product="aconitate hydratase"
FT                   /note="C1336_000800049 identified by Glimmer3 with a raw
FT                   score of 14.65. Gene function extrapolated from Cj0835c
FT                   (AL111168.1) after blastn alignment (98.49 percent identity
FT                   over a 464 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30158.1"
FT                   /translation="MSFMQEYNKLVEERAALGIPPLPLNANQTKELCKLLENENNEELA
FT                   NLLENRVNPGVDDAALVKCEFLDSILKGKISAPNIDKKRALRMLGTMLGGYNVKVLIDA
FT                   LKDENIAKDSAEVLKNIIFVHDNFHTIAELSKNNPHAKEVLQSWANADWFNKKEKLPQV
FT                   IKCIVFKVAGETNTDDLSPAGDAFTRSDIPLHANAMLKVRQAGSLEKIKELKKSGREVV
FT                   YVGDVVGTGSSRKSAINSIQWHLGKEIEGVPNKHSGGIVMGSTIAPIFFNTAQDSGALP
FT                   IICDVTNLEMGDEFEIHPYEGKIIKNGSTIAEFTLSPNTLLDEVRAGGRIPLIIGRGLC
FT                   TKAREFLGMESENIFTKPEQPKSSSGGYTLAQKMLGRACGVEGVRPGMYIEPITLTVGS
FT                   QDTTGPMTRDEIKELASLGFNADFVMQSFCHTAAYPKVSDSNLHKTLPNFMTSRGGVSL
FT                   KPGDGVIHSWLNRFVLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAVTGSMPLNVPES
FT                   VLVRFSGELQAGVTLRDLVNAIPYYAIKQGQLTVEKKNKKNIFAGKILEIEGLPNLKVE
FT                   QAFELSDASAERSAAACSVDLSIESVSEYIKSNISLIEAMIEVGYENKATLARRAEKMR
FT                   EWLKNPTLLRADKDAKYAYIIDINLNDIKEPILACPNDPDDVATLSEILADDKRPKNID
FT                   EVFVGSCMTNIGHYRALGEILKDKGILKTRLWVVPPTKMDKAQLTNEGYYSIFGAAGAR
FT                   IEVPGCSLCMGNQARVNDGAVVFSTSTRNFDNRMGMGAKVYLGSAELAAVCAILGKIPS
FT                   KEEYLQIVSEKLSDEHKANIYRYLNFNEIENFKLEN"
FT   gene            complement(794054..795250)
FT                   /locus_tag="C1336_000800050"
FT                   /note="C1336_000800050 identified by Glimmer3 with a raw
FT                   score of 12.22."
FT   CDS             complement(794054..795250)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800050"
FT                   /product="ankyrin repeat protein"
FT                   /note="C1336_000800050 identified by Glimmer3 with a raw
FT                   score of 12.22. Gene function extrapolated from CJE0921
FT                   (CP000025.1) after blastn alignment (98.41 percent identity
FT                   over a 1197 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30159.1"
FT                   /translation="MASDAINCDNIKNNKTLLNKSSNLDYLNIASSCKESLKNQDFTKK
FT                   LYAISNEIRGSNSSCNGVAYLPKLQQFDFLLLKIAIDPIAYQKTLDTPENLEKKYDILK
FT                   SYFRYWAYQSIGNFRLYKAFWKEYNNAIEPLEKYFESNFNFDKGSNIYYTSNALNEFLN
FT                   WAVGETKIYKDISPLAKIMSNKNYSVSYIQDFIFSNNPSQDDLTIALQAALLNQREKEI
FT                   LELLIRFGARIDEGYESAIFYALENYENTNFLIQNGANVNQANAFGKTPLFYAIEFNRL
FT                   DIIKLLLDNGANFNQKYINNNEKLALSANIGSNTPYFITFCALEHTSKNVLMHAAAYGN
FT                   VEILKLLISKGANFNAVDDLGFNALDFALAAGKKENADYLKSLGLKANENLFYGGSLE"
FT   gene            complement(793308..794057)
FT                   /locus_tag="C1336_000800051"
FT                   /note="C1336_000800051 identified by Glimmer3 with a raw
FT                   score of 12.99."
FT   CDS             complement(793308..794057)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800051"
FT                   /product="oxidoreductase, short chain
FT                   dehydrogenase/reductase family"
FT                   /note="C1336_000800051 identified by Glimmer3 with a raw
FT                   score of 12.99. Gene function extrapolated from C8J_0780
FT                   (CP000814.1) after blastn alignment (99.47 percent identity
FT                   over a 750 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30160.1"
FT                   /translation="MKTAFITGASSGFGRACVEAFIQKGYKVIALARRKERLEELKNAH
FT                   KDKIYTLCIDVRNQKEIFEAIENLPKEFQEIDVLFNNAGLALGVDEFDKLNLEDINTMV
FT                   DTNIKGFLYVAKAVIPILRKQKNAYIFNLGSVAGRNPYFGGNVYCGTKAFVGQFSLALR
FT                   NDLRGSNIKVTNIAPGLCKTEFSEVRFKGDIQKADAVYENTQFISANDIAKVVMSIINL
FT                   PSHINVNEIELMPVTQTWNGFYIERDE"
FT   gene            complement(791578..793311)
FT                   /locus_tag="C1336_000800052"
FT                   /note="C1336_000800052 identified by Glimmer3 with a raw
FT                   score of 9.09."
FT   CDS             complement(791578..793311)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800052"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000800052 identified by Glimmer3 with a raw
FT                   score of 9.09. Gene function extrapolated from C8J_0779
FT                   (CP000814.1) after blastn alignment (98.67 percent identity
FT                   over a 1734 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30161.1"
FT                   /translation="MNKFLVLLFLPLVAFANSSEAAANANLFGVFTLIPPLVAIALAFI
FT                   TKDVILSLFAGVLSGTFLLSLSANIFKAQHLAFVNFYNTAVESFSKIISYILGSTSDPV
FT                   NAGIILQILCIGGLVALITKMGGAKAVALKFAKRAKSAVSAQVNTWFLGLLIFFDDYAN
FT                   LLIVGPIMRPLADKFKISREKFAFIIDSTAAPVAGIAVISTWIGLEVSLIKTAYEHIGI
FT                   SDISAFGIFVETIPYRFYNIFMLFFVVMTAIMGREFGSMYKAEVRARTTGQIAPLPKSG
FT                   TLDTAELEDQFLAPKEGIKIRAFDAIVPIFTLIILAILGFYFNGLSTLEGEELAKASAN
FT                   PLSFETFRAAFGNADSSVVLFQAALFAAIAAIFIGVRRKIFNLKEAVETWIYGWKTMIF
FT                   TIVLLLFAWSLSSIVKDLGTSLFITSLLADKLPEFILPATIFAFASAISFAIGTSYGTM
FT                   GILMPLAVPLAHEIAKINGMDANAMHHYMVINISCVLTGAIFGNHCSPISDNVILSSMS
FT                   AKCDHMEHVRTQIPYALFICGISLIAGYIPVSLGLSVWFVLPLNFILIALLLRLIGKKV
FT                   P"
FT   gene            complement(790508..791581)
FT                   /locus_tag="C1336_000800053"
FT                   /note="C1336_000800053 identified by Glimmer3 with a raw
FT                   score of 9.19."
FT   CDS             complement(790508..791581)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800053"
FT                   /product="tRNA (uracil-5-)-methyltransferase"
FT                   /note="C1336_000800053 identified by Glimmer3 with a raw
FT                   score of 9.19. Gene function extrapolated from CJE0918
FT                   (CP000025.1) after blastn alignment (98.85 percent identity
FT                   over a 347 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30162.1"
FT                   /translation="MSLENFGNFLTLDEKHSFIKKYFKEFYTKEFKLFASKDKHYRTRV
FT                   ELSFYHENDTLFYAMFDPKSKKKYIIEYLDFADEKICAFMPKLLECLRQDSKLKEKLFG
FT                   VEFLTTKQELSITLLYHKNIEDIKSNLENLSNILHINLIARSKGKKLIFKTENLRQTLN
FT                   IQDRKIFYEFNNDCFIQPNTAINEKMITWVCEILSTQKRMDLLELYCGYGNFTLALAPF
FT                   FFKILATEISKSNINFALKNCELNNTTNIHFARLSSEELSLAIKKEREFFRLKDIRLDD
FT                   FNFSHVLVDPPRAGLDKSVIDLIKKYENIIYISCNPITLKENLKELSLTHRVEEFALFD
FT                   QFANTPHLECGVFLSKV"
FT   gene            790105..790521
FT                   /locus_tag="C1336_000800054"
FT                   /note="C1336_000800054 identified by Glimmer3 with a raw
FT                   score of 9.16."
FT   CDS             790105..790521
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800054"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800054 identified by Glimmer3 with a raw
FT                   score of 9.16. Gene function extrapolated from C8J_0777
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 206 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30163.1"
FT                   /translation="MEEFYPYTLTIHLLCAILFIGYLFVDVFVLGVVKKKNPNFDKSLF
FT                   SATGVKIMPFVVLLLFLSGGALAGFHFKPLNLLFAIKIILAFGILSLVVFSLFCHFILK
FT                   KKNPLGAFIHPFVFVLCIAIVILAKLMNYFFIPC"
FT   gene            complement(789573..789986)
FT                   /locus_tag="C1336_000800055"
FT                   /note="C1336_000800055 identified by Glimmer3 with a raw
FT                   score of 11.62."
FT   CDS             complement(789573..789986)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800055"
FT                   /product="CoA-binding domain protein"
FT                   /note="C1336_000800055 identified by Glimmer3 with a raw
FT                   score of 11.62. Gene function extrapolated from CJE0916
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 104 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30164.1"
FT                   /translation="MNEKETISYIINTSKNIAIFALSPDKTKASYRVAEFLQRKNYKIF
FT                   PIYPKEEFILNEKVYRNLDQIEEKIDTLILFRKGEAALEILPKLVEKNIKNLWLQLGIS
FT                   NETAKEECKKLDINFIQNRCIMLEYPYFKTKEK"
FT   gene            complement(788361..789573)
FT                   /locus_tag="C1336_000800069"
FT                   /note="Features C1336_000800056, C1336_000800057 joined to
FT                   form C1336_000800069 to correct 454 sequencing error
FT                   (C1336_000800056 identified by Glimmer3 with a raw score of
FT                   11.59, C1336_000800057 identified by Glimmer3 with a raw
FT                   score of 7.30)."
FT   CDS             complement(join(788361..788927,788929..789573))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800069"
FT                   /product="threonine dehydratase"
FT                   /note="Features C1336_000800056, C1336_000800057 joined to
FT                   form C1336_000800069 to correct 454 sequencing error
FT                   (C1336_000800056 identified by Glimmer3 with a raw score of
FT                   11.59, C1336_000800057 identified by Glimmer3 with a raw
FT                   score of 7.30). Gene function extrapolated from C8J_0775
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 195 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30165.1"
FT                   /translation="MLELNKIYKAKQQISGFVNKTPFIYSSFLSDICQSEIYLKNENLQ
FT                   ITGAYKIRGAYNKIANLSAEQKQHGVIAASAGNHAQGVAISAKKFGIKAVIVMPESTPL
FT                   LKVSATKALGAEVILKGDNFDESYTFATSYAKENNLSFIHPFEDEFVMAGQGTLMLEML
FT                   DEISDLDMIIAPVGGGGLISGIASAAKQINPNIKIIGVGAKGAPAMYESFHAKKIKNAK
FT                   SVRTIADGIAVRDANPINFNIILECVDDFIQVDDEEIANAVLFLLEKHKIIVEGAGAAS
FT                   VATLLHQKINTQNHKKIGVVLSGGNIDAQMLNIIIEKGLFKSYRKMQIHVTLVDKPGAL
FT                   LHLTDSLKIANANIVKIDYDRFSTKLDYGDAMISITLETKGKEHQEEIRKILTQKAFNF
FT                   YESF"
FT                   /artificial_location="low-quality sequence region"
FT   gene            787642..788364
FT                   /locus_tag="C1336_000800058"
FT                   /note="C1336_000800058 identified by Glimmer3 with a raw
FT                   score of 13.11."
FT   CDS             787642..788364
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800058"
FT                   /product="putative tRNA pseudouridine synthase"
FT                   /note="C1336_000800058 identified by Glimmer3 with a raw
FT                   score of 13.11. Gene function extrapolated from C8J_0774
FT                   (CP000814.1) after blastn alignment (99.50 percent identity
FT                   over a 404 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30166.1"
FT                   /translation="MKIKIIFSYDGSAFLGSATQPHKKGVQDALSGALSHLGIVSPLLM
FT                   ASRTDKGVHASYAVASVECGDHFVNLEYLQKQLNKFSHPFIHIKKIEKVKDDFEVRFDV
FT                   KSREYRYIFSHSSYSPFMASYVHFYPKFDLGKANELLGFFVGKKDLKFFCKSGGDNKTT
FT                   LREIFIARAYAYKDFSIFHFKANGFLRGQIRLSVASVLKVLEGKMSEKELKEQIEAKKQ
FT                   YNHFLAPPNGLYLSRICY"
FT   gene            786617..787642
FT                   /locus_tag="C1336_000800059"
FT                   /note="C1336_000800059 identified by Glimmer3 with a raw
FT                   score of 11.37."
FT   CDS             786617..787642
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800059"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800059 identified by Glimmer3 with a raw
FT                   score of 11.37. Gene function extrapolated from CJE0913
FT                   (CP000025.1) after blastn alignment (99.85 percent identity
FT                   over a 667 bp alignment) - for clarity, the original
FT                   product name 'membrane protein, putative' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30167.1"
FT                   /translation="MKLSLRYVLNQFLSTNLSIFFVLFAIVSMVFFIQLAKLTSSIEIS
FT                   FLDLLKLYGFMLPRILIFTLPISFFISLTLALFRLSKENESIVLFTLGFSPMILAKFFL
FT                   KIASLISAFMLVVALVMIPIVFELQDNFVNYKSTQVKFNYKTGEFGQKFLDWMIFIEKQ
FT                   DSDKYENIIMYRPKHKTDDKEQLIIAKEAHVQRKDDSFAFSLNQGKMYNFEQGQSIFSG
FT                   EFDTLVVNTQFNTDNLQTKKFYEYWNDLNENPQRAREFVIYTTIALFPLASTLFALCFG
FT                   LVTYRYEKGYVYLGMFGVIAIYFGLLSSFSQPPILACLGIFSLSLFVSAYCFKKMILSR
FT                   Y"
FT   gene            785841..786617
FT                   /locus_tag="C1336_000800060"
FT                   /note="C1336_000800060 identified by Glimmer3 with a raw
FT                   score of 10.65."
FT   CDS             785841..786617
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800060"
FT                   /product="peptidase, A24 family"
FT                   /note="C1336_000800060 identified by Glimmer3 with a raw
FT                   score of 10.65. Gene function extrapolated from C8J_0772
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 99 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30168.1"
FT                   /translation="MILFIIILGACLGSFCASLASRIIEKKPFFISRSFCFSCDTKLKY
FT                   YEIIPIFSYVFLKAKYQTCKCHLPIFLLINEILGIILLILVYFLSQNFYDFLFLSLFLF
FT                   NLFLLSLIDIKLKAVPQILLWSAFLFAFFYAFRESEILHFLIFKEFSRGFLLNAFSFGG
FT                   FVFLLKSLVFFLMNFQKKDEILENLGDADIIIMSCIGGILGFEYGFLVLFIASILTLPF
FT                   FIFFKIKAIKEQELAMIPFLNIAFVAVLFYKNLGLF"
FT   gene            785176..785844
FT                   /locus_tag="C1336_000800061"
FT                   /note="C1336_000800061 identified by Glimmer3 with a raw
FT                   score of 10.14."
FT   CDS             785176..785844
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800061"
FT                   /product="undecaprenyl diphosphate synthase"
FT                   /note="C1336_000800061 identified by Glimmer3 with a raw
FT                   score of 10.14. Gene function extrapolated from
FT                   CJJ81176_0841 (CP000538.1) after blastn alignment (98.65
FT                   percent identity over a 669 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30169.1"
FT                   /translation="MNELKHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCME
FT                   ENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLED
FT                   KVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRVIEKKLELNEENLTQNLDLP
FT                   LDVDLMLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFGK
FT                   "
FT   gene            784555..785172
FT                   /locus_tag="C1336_000800062"
FT                   /note="C1336_000800062 identified by Glimmer3 with a raw
FT                   score of 8.69."
FT   CDS             784555..785172
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800062"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800062 identified by Glimmer3 with a raw
FT                   score of 8.69. Gene function extrapolated from C8J_0770
FT                   (CP000814.1) after blastn alignment (96.76 percent identity
FT                   over a 618 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30170.1"
FT                   /translation="MSMINSTLPIQMKVLAKSGYGHYTLLLNHKKIQTKSMIELEIGVE
FT                   YLAELYMQNGGVIQFKHLSKRPNFKPFEEGLALIIAILENKISYKKFIIQNLLDCKDIE
FT                   RYQILKEMLFASFENIYHIPFIFENKSCLFQMRKRAKYLEIYLYFSVFGALKILIDLQG
FT                   VSVFTPFAKVQKFLNEHLDFNVSQENKIEPLFVFKRLFDFKG"
FT   gene            783404..784558
FT                   /locus_tag="C1336_000800063"
FT                   /note="C1336_000800063 identified by Glimmer3 with a raw
FT                   score of 15.94."
FT   CDS             783404..784558
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800063"
FT                   /product="phosphopantothenoylcysteine
FT                   decarboxylase/phosphopantothenate--cysteine ligase"
FT                   /note="C1336_000800063 identified by Glimmer3 with a raw
FT                   score of 15.94. Gene function extrapolated from CJE0909
FT                   (CP000025.1) after blastn alignment (97.57 percent identity
FT                   over a 824 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30171.1"
FT                   /translation="MKTVLLAISGSIAFYKSYELISLFKKEGFRVKVLLSNGLLKFASK
FT                   MSFEALVDEVLCEENESWQNSNNHIAFSKDADLVLFAPASVNSINKLAFGIADNLFIQT
FT                   LIAANKPLIIAPAANTNMFHHFSTQNSLKILKENKALIIEPICKVLACKDEGVGALAEV
FT                   EDIFNITKRELLKEKFWCDKSVVITGGGTKEKIDDVRCVSNFSSGKMAKAIADAFYFLG
FT                   ARVKLLSSVEFDTPYELCKFESSKDLKELLDKNSSHDFLIMTAAVSDFIPQSVKGKIKK
FT                   NEHLEGLNLHLSLNEDLLKTCKFQGKKIGFKMEFDSQNALENAKKSLKDKQLDMICLNI
FT                   IDQKNYFGSDQNELYFITLNNENKSTLQSKEKLAFELVKWCEKL"
FT   gene            782118..783407
FT                   /locus_tag="C1336_000800064"
FT                   /note="C1336_000800064 identified by Glimmer3 with a raw
FT                   score of 9.91."
FT   CDS             782118..783407
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800064"
FT                   /product="UDP-N-acetylglucosamine pyrophosphorylase"
FT                   /note="C1336_000800064 identified by Glimmer3 with a raw
FT                   score of 9.91. Gene function extrapolated from CJE0908
FT                   (CP000025.1) after blastn alignment (99.00 percent identity
FT                   over a 703 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30172.1"
FT                   /translation="MKTSILILAAGLGTRMKSQKPKVLQELCQKSMILHILKKAFALSD
FT                   DVSVVLSHQKERVEKEILEHFPKTQILEQDLQNYPGTAGALRGFEPKNERVLILCGDMP
FT                   LVEQTSLEALLGNNAKLNLAVFKARDPKSYGRVVIKKDSVEKIVEFKDANTQEKEINTC
FT                   NAGVYVIDSRLLKELLPLIDNNNAAKEYYLTDIVKLAKEKDVMIKAVFVDEDEFMGIND
FT                   KFELSIAENFMQEKIKKHWMQQGVIFHLPQSTFIGADVEFVDECEVYENVRIEGKSKII
FT                   NSIVKSSSVIENSIIENSDVGPLAHLRPNCELKNTHIGNFVECKNAKLNTVKAGHLSYL
FT                   GDCEIDSGTNIGCGTITCNYDGVKKHKTIIGKNVFVGSDTQFIAPVKIEDEVIIAAGST
FT                   VSVNVEKGALFINRAEHKMIKDYYYKKFQK"
FT   gene            complement(781240..781974)
FT                   /locus_tag="C1336_000800065"
FT                   /note="C1336_000800065 identified by Glimmer3 with a raw
FT                   score of 11.52."
FT   CDS             complement(781240..781974)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800065"
FT                   /product="flagellar biosynthetic protein FliP"
FT                   /note="C1336_000800065 identified by Glimmer3 with a raw
FT                   score of 11.52. Gene function extrapolated from CJE0907
FT                   (CP000025.1) after blastn alignment (99.31 percent identity
FT                   over a 725 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30173.1"
FT                   /translation="MKKILLFLLLSMSLFAAEATIPTVNLSLSAPNTPNQLVTTLNIVI
FT                   VLTILALAPSIVFVMTSFLRLIVVFSFLRQAMGTQSMPPNTILVTLALILTFFIMEPVA
FT                   TKSYNEGIKPYLAEKIGYEEAFIKGVKPFKDFMLKNTREKDLALFYRIRNLPNPKTIDD
FT                   VPLTVLVPAFMISELKTAFEIGFLIYLPFLVIDMVVSSVLMAMGMMMLPPTMISLPFKL
FT                   LIFVLVDGWNLLVQRLVESFVT"
FT   gene            780454..781224
FT                   /locus_tag="C1336_000800066"
FT                   /note="C1336_000800066 identified by Glimmer3 with a raw
FT                   score of 15.71."
FT   CDS             780454..781224
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800066"
FT                   /product="amino acid-binding protein"
FT                   /note="C1336_000800066 identified by Glimmer3 with a raw
FT                   score of 15.71. Gene function extrapolated from
FT                   CJJ81176_0836 (CP000538.1) after blastn alignment (98.69
FT                   percent identity over a 761 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30174.1"
FT                   /translation="MKKIILIFISFFALNLSAKDLVVGMELGYPPFEMSDKTGKASGIS
FT                   VDFLEAFAKKNGYKLVVKNIAWDGLIPALKTAKIDLIISSMTITDERKKVVDFSIPYAK
FT                   ANLAILTPLNSDITNIKDLDKKGKVLALKRGSTGHLYAVKNLKNATINLFDKENAAILE
FT                   VIQGKADGFFYDQLTIYRTWQKHQDTTRAILAPFQENPEFWGIAVQKGNAELKKELDEF
FT                   IAESKKDGLFDSLGEKYLKDVKDTFKKNNLEFFF"
FT   gene            779578..780360
FT                   /locus_tag="C1336_000800067"
FT                   /note="C1336_000800067 identified by Glimmer3 with a raw
FT                   score of 12.00."
FT   CDS             779578..780360
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000800067"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000800067 identified by Glimmer3 with a raw
FT                   score of 12.00. Gene function extrapolated from
FT                   CJJ81176_0815 (CP000538.1) after blastn alignment (96.72
FT                   percent identity over a 122 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30175.1"
FT                   /translation="MADETSGNYYNSFDMASIVKSYYNSFNQVISAFPNDKTSFSKADL
FT                   EQLPKGLNYINNEDNEKIVKNIFNAEQFHEAQAIKYSTMGLDMNLMKLDFSPQSMEQDP
FT                   SIEGDFNPDMSVYPKNEDGSYFKEALFMSFLKSYPPFPSPNQVVFSPEAKVREAKLELE
FT                   MKANPSFSVSLDDIMTGKVDFASLLKGYAQEGWLDAGIYAMEKGVKWQNIYVGSGISFD
FT                   REFHQAKANGWKASNESINSFVNNIMDRLNNLIGQTRV"
FT   gap             845138..845863
FT                   /estimated_length=726
FT   gap             846523..847400
FT                   /estimated_length=878
FT   gene            complement(862852..863319)
FT                   /locus_tag="C1336_000780000"
FT                   /note="C1336_000780000 identified by Glimmer3 with a raw
FT                   score of 2.79."
FT   CDS             complement(862852..863319)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780000 identified by Glimmer3 with a raw
FT                   score of 2.79. Gene function extrapolated from CJE1138
FT                   (CP000025.1) after blastn alignment (96.33 percent identity
FT                   over a 463 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30176.1"
FT                   /translation="MDWVIDLNRYKFALDEEGRIIWALYDDIEKGKLKDPRDIDSTPES
FT                   RKEFDHYMDGYKNGMATRFDVDIRNERDERSAKLTMDTLVLSAKLAALTPPQGYPNAPR
FT                   YYSPERLEIIYKRHKLDRLLDPRIPAIYRYNFPEELRAKIRAYAKEHNIKE"
FT   gene            complement(862035..862880)
FT                   /locus_tag="C1336_000780001"
FT                   /note="C1336_000780001 identified by Glimmer3 with a raw
FT                   score of 8.65."
FT   CDS             complement(862035..862880)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780001 identified by Glimmer3 with a raw
FT                   score of 8.65. Gene function extrapolated from CJE1109
FT                   (CP000025.1) after blastn alignment (97.49 percent identity
FT                   over a 438 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30177.1"
FT                   /translation="MLKNIISKSKPQKKGKTMQKILQINLEKRKALENFKNLALLGLGG
FT                   TMLLNLKEQALDFSQELTYINTYDKYLNLKLDSFYIPSTLLSLLQLTKKSKEAFYINVL
FT                   INSDTHYKNPLLQYAITQKQEQENIVYALKNNENINTSFTNLNALKLALEEKNFYLNFI
FT                   DLNSKESLLSFYNQILSNHHLKDYFYIKNNQFFIKKDIKNKIVFHNINSSSIISNYLRL
FT                   LNDFNTLSKIELINILESLSLYNLSTLMQTIQSKNEYNSKDFDKDSIFLSNMIMNVRLK
FT                   "
FT   gene            861842..862012
FT                   /locus_tag="C1336_000780002"
FT                   /note="C1336_000780002 identified by Glimmer3 with a raw
FT                   score of 5.46."
FT   CDS             861842..862012
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780002 identified by Glimmer3 with a raw
FT                   score of 5.46. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30178.1"
FT                   /translation="MYNYCQGLLALPLFLRGETPLWLAPNKLLTKLLFFLLNFYIFLYF
FT                   LFELNNKLNKI"
FT   gene            complement(858649..861459)
FT                   /locus_tag="C1336_000780003"
FT                   /note="C1336_000780003 identified by Glimmer3 with a raw
FT                   score of 3.07."
FT   CDS             complement(858649..861459)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780003 identified by Glimmer3 with a raw
FT                   score of 3.07. Gene function extrapolated from CJE1108
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 92 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30179.1"
FT                   /translation="MINAKGSRLWHLPFIIIPNKLFNFLKQSMKRFYFLFLSTLFFAPS
FT                   FLFGATEIANSNLIYTWGYGDVMNEIMQAVKGITTETSYIVNAALAISLLLFSIKKAMD
FT                   GQTNPVFEFGKMFILFAVVWQMFLRAPNDNSHRFMIHDEVTSKDYVISQIPIGIGKSFA
FT                   LMTQFEKVILEAMEKHFSTPQSTNFSNAGLGFSLQVMSTLPSVKLSAIDATLQKNIDFY
FT                   FRNCVSVGILLNQQGRNLFQNSDNLMQDLFTNIGNGSQLTPLFKNNNNVEEQSVVPCSD
FT                   AGPQIVEMIQNDTDEAMKIHAALLGMANDMTNYEQKFLGAAQIYNEQAVSARSYLQQSM
FT                   VMLASQDAIINTAKSVGLNPASVAANTAYADQQFYASMQAQGHMAQTYLPLAKAYLTAI
FT                   IIGLSWLVALLSIVFGSYAHIKMFFTLCIWIVLWTPILCIINFINDFNLMNVAQVITGG
FT                   KAALSLGDNMLIFKEVANRSNFMNYLVMSTPVLAYAIAKASEQGFITFASGLSQALTGA
FT                   SRAAGSFANQQALSTQTSIAAPRGDEVWAMNAGVASLQYARNIDGAVTKFNTQSVMGDN
FT                   TKNSEISNANMTGTNVDGMMSGAKLSAGAMTTVNSVSQANSDAWNKNFNDQYSHMSQSG
FT                   RASALNEAKGFMEKGDEAFKKAFANNIGQEIQNRTDLTSEEKAEIALAASAHAGFNILG
FT                   NGAEIQSSASSKRGIGNVETFSEAQKAAYNEIMERASLKTLSTTKGMDSSWSNTLSGGD
FT                   STAYSKMVGYAQSYTQTEQGIQSVSTNNIDNTLNVVARDLAAGDNKDFSSLNTAQQNEY
FT                   FAKAGNYVSDMIKNDPAQLAQYNSQYGAQSIVSPNNTTMPHAAGMNFKTIDGSERSVLT
FT                   QSNLNQDQVNQSSKRTSNTTTMPDSQEVKSGATHSQIAQDNKKGGNAIRETSKNWNPLG
FT                   KDTPSI"
FT   gene            complement(858497..858685)
FT                   /locus_tag="C1336_000780004"
FT                   /note="C1336_000780004 identified by Glimmer3 with a raw
FT                   score of 4.45."
FT   CDS             complement(858497..858685)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780004 identified by Glimmer3 with a raw
FT                   score of 4.45. Gene function extrapolated from C8J_0875
FT                   (CP000814.1) after blastn alignment (97.89 percent identity
FT                   over a 142 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30180.1"
FT                   /translation="MESSWKRYSFYLNKRLYSLLFKDKIESKIAQFTEKAMKNNDNIKT
FT                   NAIKAITTDLTVVNTPK"
FT   gene            complement(858175..858300)
FT                   /locus_tag="C1336_000780005"
FT                   /note="C1336_000780005 identified by Glimmer3 with a raw
FT                   score of 5.74."
FT   CDS             complement(858175..858300)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780005"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780005 identified by Glimmer3 with a raw
FT                   score of 5.74. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30181.1"
FT                   /translation="MINNLFIFLIKLYHILINFASIFAIKCLFFRGLKRISFFLT"
FT   gene            complement(857873..858022)
FT                   /locus_tag="C1336_000780006"
FT                   /note="C1336_000780006 identified by Glimmer3 with a raw
FT                   score of 10.63."
FT   CDS             complement(857873..858022)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780006"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780006 identified by Glimmer3 with a raw
FT                   score of 10.63. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30182.1"
FT                   /translation="MKTTEYNTQQKNNKEYLAERKAVKKTMAKMEKELEKPAINAVFQR
FT                   LKNK"
FT   gene            complement(857484..857876)
FT                   /locus_tag="C1336_000780007"
FT                   /note="C1336_000780007 identified by Glimmer3 with a raw
FT                   score of 3.17."
FT   CDS             complement(857484..857876)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780007"
FT                   /product="death-on-curing family protein"
FT                   /note="C1336_000780007 identified by Glimmer3 with a raw
FT                   score of 3.17. Gene function extrapolated from CJE1100
FT                   (CP000025.1) after blastn alignment (99.61 percent identity
FT                   over a 258 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30183.1"
FT                   /translation="MKYIELSEAIAIHEKIIEKTGGLSGYNETQIGYLASALEHIKNDD
FT                   YYPTITDKITHLIFSCVKFHPFADGNKRTSIFLGMHFLDLDGKYNDKFAEVMEDIVVGV
FT                   ADDSIAKDDLNQILQNFIDKNIEVEG"
FT   gene            856758..857189
FT                   /locus_tag="C1336_000780008"
FT                   /note="C1336_000780008 identified by Glimmer3 with a raw
FT                   score of 7.84."
FT   CDS             856758..857189
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780008"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780008 identified by Glimmer3 with a raw
FT                   score of 7.84. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30184.1"
FT                   /translation="MQNKEILDNNQLISRISLGDVIFIIKLEHLEAKIINSSNINFKKY
FT                   YAHNKEYYFHYVNNKKYKNSFSNIEKANIVLNLLLTIRNKSFHWENLYKTKITNQKALA
FT                   PRITTKSHNTFIGVMPNKINAFLSDLIESFEKDLNSYLK"
FT   gene            856528..856752
FT                   /locus_tag="C1336_000780009"
FT                   /note="C1336_000780009 identified by Glimmer3 with a raw
FT                   score of 9.53."
FT   CDS             856528..856752
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780009"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780009 identified by Glimmer3 with a raw
FT                   score of 9.53. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30185.1"
FT                   /translation="MPTEQTDLEYLFSKERLESYNNIYEHFDNLKMIASITTKIAILEL
FT                   VLRNLLDKHMKEKDLEWLRNYNEENIKQK"
FT   gene            complement(856407..856529)
FT                   /locus_tag="C1336_000780010"
FT                   /note="C1336_000780010 identified by Glimmer3 with a raw
FT                   score of 5.12."
FT   CDS             complement(856407..856529)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780010"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780010 identified by Glimmer3 with a raw
FT                   score of 5.12. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30186.1"
FT                   /translation="MNFSNIGLIFLNHIKFLQKILLFTLVSTFFKLSFHFFFWK"
FT   gene            855344..856351
FT                   /locus_tag="C1336_000780011"
FT                   /note="C1336_000780011 identified by Glimmer3 with a raw
FT                   score of 2.88."
FT   CDS             855344..856351
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780011"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780011 identified by Glimmer3 with a raw
FT                   score of 2.88. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30187.1"
FT                   /translation="MEKNIEKLILEAYEDSKTKFDHVTTGHISQYLKRKYDLKINCSKA
FT                   LIEAGFDLEKDENEPSLVYVKKATTRNKTSNRDQIQNKVEEKPLLFQFAYFPNFLNTLQ
FT                   ELSNIAQKEFWGNGNNILFSYLFKYFEFIYENKSYPDIITYNKDKTKACFNIGLYSTGV
FT                   FPIFAYFEIQENGGYVFRKFCSNGDRVLDDLEIPKSLSDYDTFKNEIIFDSKLDFRVNH
FT                   LHLFERKERLPEIVKKLNDRFIGHIINGELKIIKDNYNLQKMIIPAAYKQRVVLYIPLK
FT                   LQEESVDTIVVVEKEEVKNEQYYAVRTILNPHDNIYKTARVLSIVESEWVKNTI"
FT   gene            complement(854714..854839)
FT                   /locus_tag="C1336_000780012"
FT                   /note="C1336_000780012 identified by Glimmer3 with a raw
FT                   score of 6.63."
FT   CDS             complement(854714..854839)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780012"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780012 identified by Glimmer3 with a raw
FT                   score of 6.63. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30188.1"
FT                   /translation="MQLYYNLTTKKSLFKILFYRVFNINLIFIVEKNILKSVIKK"
FT   gene            854565..854702
FT                   /locus_tag="C1336_000780013"
FT                   /note="C1336_000780013 identified by Glimmer3 with a raw
FT                   score of 8.01."
FT   CDS             854565..854702
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780013"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780013 identified by Glimmer3 with a raw
FT                   score of 8.01. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30189.1"
FT                   /translation="MPAIISFKCLYLGYTLALCPLAQLFTFFSKKAKEPKNKGFNIDKP
FT                   "
FT   gene            853927..854169
FT                   /locus_tag="C1336_000780014"
FT                   /note="C1336_000780014 identified by Glimmer3 with a raw
FT                   score of 4.94."
FT   CDS             853927..854169
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780014"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780014 identified by Glimmer3 with a raw
FT                   score of 4.94. Gene function extrapolated from
FT                   JJD26997_0977 (CP000768.1) after blastn alignment (97.14
FT                   percent identity over a 140 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30190.1"
FT                   /translation="MTPAVMAYIKKTKNTFIAKLKRVKNHESIIDLQAKYPKLDIVSAY
FT                   QFLTLKDKFKITKSEIQDFETLIDILSKNTQKSKK"
FT   gene            852918..853040
FT                   /locus_tag="C1336_000780015"
FT                   /note="C1336_000780015 identified by Glimmer3 with a raw
FT                   score of 4.20."
FT   CDS             852918..853040
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780015"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780015 identified by Glimmer3 with a raw
FT                   score of 4.20. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30191.1"
FT                   /translation="MIYFFVFFIYLYSKIFVNFSIKKYSKSKPTKRQKIVLIKH"
FT   gene            852506..852634
FT                   /locus_tag="C1336_000780016"
FT                   /note="C1336_000780016 identified by Glimmer3 with a raw
FT                   score of 10.88."
FT   CDS             852506..852634
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780016"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780016 identified by Glimmer3 with a raw
FT                   score of 10.88. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30192.1"
FT                   /translation="MPLEKRAAQFAPFSVLKGFDEAIEKKKKEMERKLEKSIYINE"
FT   gene            850993..852450
FT                   /locus_tag="C1336_000780017"
FT                   /note="C1336_000780017 identified by Glimmer3 with a raw
FT                   score of 3.27."
FT   CDS             850993..852450
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780017"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780017 identified by Glimmer3 with a raw
FT                   score of 3.27. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30193.1"
FT                   /translation="MDNTQKYAAIDLKSFYASVECILRKLDPLNTNLVVADESRTEKTI
FT                   CLAVSPALRSYNISGRLRLFELIQKVKTINYKRLKIAKYFSAKSYNHLELINNPNLELD
FT                   YIVAKPRMSTYIDYSSKIYSIYLKYFDPKDIHIYSIDEVFIDLTPYIKHYKLSADKLIE
FT                   NILFEILKTTQITATAGIGTNLYLAKIAMDILAKKQNTNKDGLCIGYLDEMLYRRKLWQ
FT                   HTPINDFWRIGKGYATKLKSIGINNMGDLARYSLNNEDKLYQIFGVNAELLIDHAWGFE
FT                   SCTMQAIKEYKSKHISKVMAKVLPKPYSFKKARNMLKEIVDHMVLELIEQNLTCNQIVL
FT                   DVQYDKESLEKVQSYKGPMSKDSYGRSIPKNAHSTINLDYHSSSLETICNKGLELFDLI
FT                   VNADFLIRKISLTLNNVVKNDTIKKIKEPSLFADIEQKENKNFIKEEKLQKARLAIVHK
FT                   YGKKSIFKASSLENGLKINSQIGGHNA"
FT   gene            complement(850464..850577)
FT                   /locus_tag="C1336_000780018"
FT                   /note="C1336_000780018 identified by Glimmer3 with a raw
FT                   score of 5.58."
FT   CDS             complement(850464..850577)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780018"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780018 identified by Glimmer3 with a raw
FT                   score of 5.58. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30194.1"
FT                   /translation="MEKSQNLYHFFHFSLFKKWNCYNKDLAFYINHKPKYQ"
FT   gene            complement(850190..850303)
FT                   /locus_tag="C1336_000780019"
FT                   /note="C1336_000780019 identified by Glimmer3 with a raw
FT                   score of 7.29."
FT   CDS             complement(850190..850303)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780019"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780019 identified by Glimmer3 with a raw
FT                   score of 7.29. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30195.1"
FT                   /translation="MNEVQFDSWNERKKSLNKVKLIRKVSVKKRFIGLALV"
FT   gene            complement(849843..850139)
FT                   /locus_tag="C1336_000780020"
FT                   /note="C1336_000780020 identified by Glimmer3 with a raw
FT                   score of 4.94."
FT   CDS             complement(849843..850139)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780020"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780020 identified by Glimmer3 with a raw
FT                   score of 4.94. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30196.1"
FT                   /translation="MVINSFYNGTFLGTPLSSKTKNKKGFLFHKFKDNKGTLQVALLGQ
FT                   MRVFDTKRIKTYIGKINDKDFEMLKNKIVENIIIPALRQGNSKNEPNPFISEK"
FT   gene            849743..849859
FT                   /locus_tag="C1336_000780021"
FT                   /note="C1336_000780021 identified by Glimmer3 with a raw
FT                   score of 2.61."
FT   CDS             849743..849859
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780021"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780021 identified by Glimmer3 with a raw
FT                   score of 2.61. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30197.1"
FT                   /translation="MFNSLQTSLIIFSFSSVMLILYFRLIFFSNNFFITFQK"
FT   gene            complement(849661..849795)
FT                   /locus_tag="C1336_000780022"
FT                   /note="C1336_000780022 identified by Glimmer3 with a raw
FT                   score of 1.06."
FT   CDS             complement(849661..849795)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780022"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780022 identified by Glimmer3 with a raw
FT                   score of 1.06. Gene function extrapolated from
FT                   JJD26997_0299 (CP000768.1) after blastn alignment (90.57
FT                   percent identity over a 106 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30198.1"
FT                   /translation="MTEEKENIIKEVCKELNTTQTELGRQLDVFASTINTWASGKILT"
FT   gene            complement(849336..849638)
FT                   /locus_tag="C1336_000780023"
FT                   /note="C1336_000780023 identified by Glimmer3 with a raw
FT                   score of 1.22."
FT   CDS             complement(849336..849638)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780023"
FT                   /product="putative prophage LambdaCh01, recombination
FT                   protein Bet"
FT                   /note="C1336_000780023 identified by Glimmer3 with a raw
FT                   score of 1.22. Gene function extrapolated from
FT                   JJD26997_0851 (CP000768.1) after blastn alignment (96.04
FT                   percent identity over a 303 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30199.1"
FT                   /translation="MGVGMTETSNIVIDIEAYQNNTHENKKKVDFSQNFSQSNATTFSE
FT                   DERQVLLSLGLEVKNEDGYYWIVGNTYGLNEKIKQLGYRFHSEKKTWWKQIGNVA"
FT   gene            complement(849127..849282)
FT                   /locus_tag="C1336_000780024"
FT                   /note="C1336_000780024 identified by Glimmer3 with a raw
FT                   score of 8.40."
FT   CDS             complement(849127..849282)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780024"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780024 identified by Glimmer3 with a raw
FT                   score of 8.40. Gene function extrapolated from
FT                   JJD26997_0852 (CP000768.1) after blastn alignment (96.64
FT                   percent identity over a 149 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30200.1"
FT                   /translation="MKKEITLNESFKALLKSIFSDTDQAKKLIQAFEEFANDRATTQRL
FT                   NFGNLK"
FT   gene            complement(848578..848718)
FT                   /locus_tag="C1336_000780025"
FT                   /note="C1336_000780025 identified by Glimmer3 with a raw
FT                   score of 3.61."
FT   CDS             complement(848578..848718)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780025"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780025 identified by Glimmer3 with a raw
FT                   score of 3.61. Gene function extrapolated from
FT                   JJD26997_0849 (CP000768.1) after blastn alignment (94.33
FT                   percent identity over a 141 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30201.1"
FT                   /translation="MESIGIGLFINSLYGLQTGDSRAFIILIESLLILTVVALSSIFLK
FT                   D"
FT   gene            complement(848439..848609)
FT                   /locus_tag="C1336_000780026"
FT                   /note="C1336_000780026 identified by Glimmer3 with a raw
FT                   score of 6.11."
FT   CDS             complement(848439..848609)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780026"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780026 identified by Glimmer3 with a raw
FT                   score of 6.11. Gene function extrapolated from
FT                   JJD26997_0850 (CP000768.1) after blastn alignment (98.23
FT                   percent identity over a 113 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30202.1"
FT                   /translation="MHYHQSFLKIELFLKKGEKMDGYNIAILIGAITLVFGILVLVAHY
FT                   LNDKHTNESKS"
FT   gene            848020..848433
FT                   /locus_tag="C1336_000780027"
FT                   /note="C1336_000780027 identified by Glimmer3 with a raw
FT                   score of 4.58."
FT   CDS             848020..848433
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780027"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780027 identified by Glimmer3 with a raw
FT                   score of 4.58. Gene function extrapolated from
FT                   JJD26997_0132 (CP000768.1) after blastn alignment (93.46
FT                   percent identity over a 107 bp alignment).; repeat
FT                   motif-containing gene"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30203.1"
FT                   /translation="MKNYYISEGVKALFSIYFKDQTEENFIKALNEFAKESQINSQEIK
FT                   DKSFREFKEAISKLPTIDLLNTRFDKLEYSIGAKLDKPEDSVCAKLNKLENKLDSFKRE
FT                   VRTYVIILAALMFILQPTIFDLILSIFKSFLRQ"
FT   gene            complement(847783..847899)
FT                   /locus_tag="C1336_000780028"
FT                   /note="C1336_000780028 identified by Glimmer3 with a raw
FT                   score of 5.69."
FT   CDS             complement(847783..847899)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780028"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780028 identified by Glimmer3 with a raw
FT                   score of 5.69. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30204.1"
FT                   /translation="MNIINNFYKGVFCFFVFILLFKSYITTLYTLSFLKVLK"
FT   gene            complement(847556..847675)
FT                   /locus_tag="C1336_000780029"
FT                   /note="C1336_000780029 identified by Glimmer3 with a raw
FT                   score of 10.47."
FT   CDS             complement(847556..847675)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000780029"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000780029 identified by Glimmer3 with a raw
FT                   score of 10.47. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30205.1"
FT                   /translation="MDLSHSLGQYIILAFAIAVAIFVTFYDFDKKDHQHNIKK"
FT   gap             863347..864891
FT                   /estimated_length=1545
FT   gene            complement(869648..869956)
FT                   /locus_tag="C1336_000770000"
FT                   /note="C1336_000770000 identified by Glimmer3 with a raw
FT                   score of 7.43."
FT   CDS             complement(869648..869956)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770000 identified by Glimmer3 with a raw
FT                   score of 7.43. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30206.1"
FT                   /translation="MVYFYISNNYDQFTILFIMLFIFILNMLYIKNFFALLLLVILIFI
FT                   YMKYHEFIYNFKILFFIFAPIIFIFLRAWRILITFLCGYIFLVAMVYIFELLGGFYK"
FT   gene            complement(869457..869651)
FT                   /locus_tag="C1336_000770001"
FT                   /note="C1336_000770001 identified by Glimmer3 with a raw
FT                   score of 6.16."
FT   CDS             complement(869457..869651)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770001 identified by Glimmer3 with a raw
FT                   score of 6.16. Gene function extrapolated from CJE1129
FT                   (CP000025.1) after blastn alignment (98.89 percent identity
FT                   over a 90 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30207.1"
FT                   /translation="MKYYVTIYIDPLVECFLDFKNQCYWQREDFTHAFLGLTKGKSPDE
FT                   LDKADETLRQEYLKKQRMG"
FT   gene            complement(869159..869383)
FT                   /locus_tag="C1336_000770002"
FT                   /note="C1336_000770002 identified by Glimmer3 with a raw
FT                   score of 2.31."
FT   CDS             complement(869159..869383)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770002 identified by Glimmer3 with a raw
FT                   score of 2.31. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30208.1"
FT                   /translation="METYKPKIYIIPQITFADILQSPKTEQYYIYNQDYQDYQKFTPYG
FT                   LDFKLYSKDFITKLDFKDKAYNVLYNTRV"
FT   gene            complement(868661..869158)
FT                   /locus_tag="C1336_000770003"
FT                   /note="C1336_000770003 identified by Glimmer3 with a raw
FT                   score of 5.34."
FT   CDS             complement(868661..869158)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770003 identified by Glimmer3 with a raw
FT                   score of 5.34. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30209.1"
FT                   /translation="MGEDITFSIFVGSLLSIAVITKFYLIALSVLIAFSILNYWMRINI
FT                   KEFVKSYFLISFIIFFMAIVIIFYLTYDLETSRSLVLLDPPEIEKLSPQEYRVRNYFKF
FT                   LTFATMFFLAITFFILPCLLQAYLFKCYSTGEKHKKLSWFIGFVCNVPILISSVYVIYE
FT                   NL"
FT   gene            complement(868543..868674)
FT                   /locus_tag="C1336_000770004"
FT                   /note="C1336_000770004 identified by Glimmer3 with a raw
FT                   score of 8.89."
FT   CDS             complement(868543..868674)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770004 identified by Glimmer3 with a raw
FT                   score of 8.89. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30210.1"
FT                   /translation="MKIFKDYQKFTPYGLDFKLYSKDFIAKLDFKNKAYNVLYNTGV"
FT   gene            complement(868033..868542)
FT                   /locus_tag="C1336_000770005"
FT                   /note="C1336_000770005 identified by Glimmer3 with a raw
FT                   score of 7.67."
FT   CDS             complement(868033..868542)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770005"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770005 identified by Glimmer3 with a raw
FT                   score of 7.67. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30211.1"
FT                   /translation="MGEDIILSIFWGLIGFIFRLVTIDTILYITALSVLIAFSIINYWM
FT                   RINIKEFLKSYFSIYFIIFFTAIIIIFYLSYDLETYRGYVMLGPPEAEELSPQEYIVYK
FT                   CSKFLIFINFIFFTITFIILPCLLQAYFFKCYSTGEKHKKLSWLIGFVCNIFLLMASVY
FT                   VIYENL"
FT   gene            complement(867915..868046)
FT                   /locus_tag="C1336_000770006"
FT                   /note="C1336_000770006 identified by Glimmer3 with a raw
FT                   score of 4.91."
FT   CDS             complement(867915..868046)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770006"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770006 identified by Glimmer3 with a raw
FT                   score of 4.91. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30212.1"
FT                   /translation="MKIFKDYQKFTPYGLDFKLYSKDFIAKLDFKNKAYNVLYNTGV"
FT   gene            complement(867420..867914)
FT                   /locus_tag="C1336_000770007"
FT                   /note="C1336_000770007 identified by Glimmer3 with a raw
FT                   score of 8.77."
FT   CDS             complement(867420..867914)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770007"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770007 identified by Glimmer3 with a raw
FT                   score of 8.77. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30213.1"
FT                   /translation="MGDSITLSIFLGFIGFIFACSVIEFYLIALSVLIAFSILNYWIKI
FT                   NIKEFVKSYFLISFIIFFMAIVIIFYLTYDLETSRGLVLLDPPEIEKLSPQEYKAHNYF
FT                   DFLGGITFIFFIITFFILPCLLQAYLFKCYSTGEKHKKLSWLIGFVCNIFLLMAGVYMM
FT                   Y"
FT   gene            complement(866896..867348)
FT                   /locus_tag="C1336_000770008"
FT                   /note="C1336_000770008 identified by Glimmer3 with a raw
FT                   score of 6.87."
FT   CDS             complement(866896..867348)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770008"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770008 identified by Glimmer3 with a raw
FT                   score of 6.87. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30214.1"
FT                   /translation="MDRELFITRLAFINSDEIDTIDKNSSIAYLKALYQCENSIAINYN
FT                   QEELFTQATAINNLGYNSTFTKIFILDKENLNDTYLDARKRLYKSINTLKEKRNEKIKD
FT                   IQDYLDKEISLQDNLNNQSFNTKENDVNLILNEVFNKVQLSDMDIL"
FT   gene            complement(866547..866756)
FT                   /locus_tag="C1336_000770009"
FT                   /note="C1336_000770009 identified by Glimmer3 with a raw
FT                   score of 3.89."
FT   CDS             complement(866547..866756)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770009"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770009 identified by Glimmer3 with a raw
FT                   score of 3.89. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30215.1"
FT                   /translation="MVILCFNIGIDNFKNSFVVKIINGEKTGYKTLKEAWMAWNKSQNK
FT                   VMQGLINRRNAEYKLYIQGGYEKW"
FT   gene            complement(866194..866553)
FT                   /locus_tag="C1336_000770010"
FT                   /note="C1336_000770010 identified by Glimmer3 with a raw
FT                   score of 4.94."
FT   CDS             complement(866194..866553)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770010"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770010 identified by Glimmer3 with a raw
FT                   score of 4.94. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30216.1"
FT                   /translation="MVIFKNILLFLFFSTYLLAQEDFTPLEQCTYENEKFWIKILNLCP
FT                   EGNITCDKIVYVGVNKNNGKYIVLNGKSISDVNMNFKGYVFKNGIYEYNIFNNFLYISK
FT                   NKRNIQEYGLKLCEK"
FT   gene            complement(865065..865928)
FT                   /locus_tag="C1336_000770011"
FT                   /note="C1336_000770011 identified by Glimmer3 with a raw
FT                   score of 3.56."
FT   CDS             complement(865065..865928)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000770011"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000770011 identified by Glimmer3 with a raw
FT                   score of 3.56. Gene function extrapolated from CJE1137
FT                   (CP000025.1) after blastn alignment (98.84 percent identity
FT                   over a 86 bp alignment) - for clarity, the original product
FT                   name 'conserved hypothetical protein' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30217.1"
FT                   /translation="MFISSKTELIQTIKNLTINNKEVKQIDFINTLKKLVNPLAVIRDH
FT                   FITYPFAINSKFISFDLKKIFYGIDLCTGVFDTHFSFHYEIDQKLEENKEFLLKRLLSY
FT                   LIIDEKRNATALEDIKEQKYIIDDYTFYFKELKSLELKKCTMYQLPCNHPLFKEFRNKE
FT                   KQISAFKKDEDSPIHAYNEALQILQDFANGIYNTSKDKTGRYIEDKNKARRLLEKLNII
FT                   GQNNLKAMYMGINGNKESLKAIGKRENNTSKASANADITSETKTPPNFIGRLATTIIIE
FT                   DGLYMG"
FT   gap             870005..870941
FT                   /estimated_length=937
FT   gene            876137..876601
FT                   /locus_tag="C1336_000760000"
FT                   /note="C1336_000760000 identified by Glimmer3 with a raw
FT                   score of 15.52."
FT   CDS             876137..876601
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000760000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000760000 identified by Glimmer3 with a raw
FT                   score of 15.52. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30218.1"
FT                   /translation="MKNKKLLDDEYIQEVFKYYLKNDNYLKDALYGLKKYERRAFISSI
FT                   LSYEYKNLVENGNLKVDAKYKVTLPPNLIAVLEYDKSEFNGANLRNFINDLEFELEHIE
FT                   MELYDDPADFEGGDYYNEDSDCDEDYTVEDWVEDQVSDIKDFLYALKDFK"
FT   gene            875177..876091
FT                   /locus_tag="C1336_000760001"
FT                   /note="C1336_000760001 identified by Glimmer3 with a raw
FT                   score of 12.38."
FT   CDS             875177..876091
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000760001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000760001 identified by Glimmer3 with a raw
FT                   score of 12.38. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30219.1"
FT                   /translation="MKTLEDIKAMSYQEKDELEDLVLEIIDNNDLVKLKDILKDYPVKI
FT                   SCYELNIKDEDGDFPLFDPFNLIIRAAHACEDNNNDFSILDYLFDEYGLSLKDPKYNFA
FT                   FHDMKYIKEANDKYILMEEVEDTIIYQNALIYDYILNADNPNSQIIKYLVNRGAKFEVH
FT                   KDGFGWTPMHFWVMQNNYELLELAIKGGANVDMQTLLDPEKEYNKTLLFEAVSEPETYR
FT                   VTKLLIELGANVNFVAPVTPLDIAKGSRNKKLLKDAGAMTSAQLDKKFNIYWDSEECEK
FT                   DESYMEKYCKLLNDAIKKAKESE"
FT   gene            874752..874967
FT                   /locus_tag="C1336_000760002"
FT                   /note="C1336_000760002 identified by Glimmer3 with a raw
FT                   score of 3.09."
FT   CDS             874752..874967
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000760002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000760002 identified by Glimmer3 with a raw
FT                   score of 3.09. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30220.1"
FT                   /translation="MYKFSKYLIHFCRGDEMLKYSQFIFYNLNKDLKQIHMNFTLNNKN
FT                   NYKLITEKLAITWAKLNFLHPFKERQ"
FT   gene            873785..874537
FT                   /locus_tag="C1336_000760003"
FT                   /note="C1336_000760003 identified by Glimmer3 with a raw
FT                   score of 12.42."
FT   CDS             873785..874537
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000760003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000760003 identified by Glimmer3 with a raw
FT                   score of 12.42. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30221.1"
FT                   /translation="MGNKDFGYFLNALENNDIKALEILLVDEELSNMQDENGNTLLHHA
FT                   ARLGSAGGVAMLIDCNPFIRNNDGKTAFNIAYDNDDIYIAKMIDNVKDSWQRKHGRYEE
FT                   KLDESEMDIPFYLTDDKESILKQFKEENIITESLLDTSYGDGMVILQSVLNAWNLSFIN
FT                   KKMPPVVEILIDQANGDVEALIDGFDKHMEQWENEVWDEPAVYAGKTEDGEDDYRYETD
FT                   PDEWIREIIPFDKWDELKKQMRLYAVKK"
FT   gene            873307..873711
FT                   /locus_tag="C1336_000760004"
FT                   /note="C1336_000760004 identified by Glimmer3 with a raw
FT                   score of 12.02."
FT   CDS             873307..873711
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000760004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000760004 identified by Glimmer3 with a raw
FT                   score of 12.02. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30222.1"
FT                   /translation="MNESIYGSLEFYSKETQNTPSNKRDLGVFGDVAPYALGITEGFAT
FT                   EAFKKGIESLDIDANSLFWKTMRYKITVVNFGILNFFLAKAEGKSNVRALTETGVGIFT
FT                   GVVLNKTPLSKYRDECSKLLNEAIKRLRSN"
FT   gene            872676..873314
FT                   /locus_tag="C1336_000760005"
FT                   /note="C1336_000760005 identified by Glimmer3 with a raw
FT                   score of 3.42."
FT   CDS             872676..873314
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000760005"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000760005 identified by Glimmer3 with a raw
FT                   score of 3.42. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30223.1"
FT                   /translation="MSQINNNTEIKEQDTQDEIIWEGKKHIPLFLLFWITYIVLLCFFL
FT                   YLFPRLFNPSKEIDYKWFIVFFIFLLGIYTFARAIYKMANIKRIYITKEKLVIEYYIKN
FT                   DLVFPLGTFFIYYRQISYSPSPGHIVIYTFGDKAKEYLEPGLLSAGDDPTKGCCEKINA
FT                   IIKPHVMPYLLSLSDEEFEKIISHVSGFSEINTTFLKEAMELRKEKKDE"
FT   gene            complement(871028..871489)
FT                   /locus_tag="C1336_000760006"
FT                   /note="C1336_000760006 identified by Glimmer3 with a raw
FT                   score of 3.43."
FT   CDS             complement(871028..871489)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000760006"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000760006 identified by Glimmer3 with a raw
FT                   score of 3.43. Gene function extrapolated from CJE1130
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 84 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30224.1"
FT                   /translation="MQIPIYSKLKEKLESKGIDNISSGQIAWFVCSLILALVTYIILTF
FT                   HYIYISYGKYDKNLFLLIFDRNAIELFVIVYSCIMFNLLYIYNAIPLVLSAVFIFLAFY
FT                   FSSLSLFIVGCCGIGVFFLISIFKRKFMFSVLLFALLFLWTGNILERIL"
FT   gap             877820..878725
FT                   /estimated_length=906
FT   gene            879171..879584
FT                   /locus_tag="C1336_000750000"
FT                   /note="C1336_000750000 identified by Glimmer3 with a raw
FT                   score of 3.24."
FT   CDS             879171..879584
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000750000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000750000 identified by Glimmer3 with a raw
FT                   score of 3.24. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30225.1"
FT                   /translation="MVGFNINDLWYEIGNGDFLHAFFSNVAYHLEKGNWGSRFPILMNE
FT                   VYQGELNFSQASLALNELENIQKEFKNFTPKQIIWDIENLSLMPPWGDNISSDITNLSN
FT                   YFITSDGNDFIELFKKVLQLAENEKVNLTIKSF"
FT   gene            879010..879156
FT                   /locus_tag="C1336_000750001"
FT                   /note="C1336_000750001 identified by Glimmer3 with a raw
FT                   score of 8.98."
FT   CDS             879010..879156
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000750001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000750001 identified by Glimmer3 with a raw
FT                   score of 8.98. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30226.1"
FT                   /translation="MQHLPPKTEQIFIIDSRGQNISKEIQEKIKQKIRIKLNCDILIQF
FT                   KTK"
FT   gene            878828..878977
FT                   /locus_tag="C1336_000750002"
FT                   /note="C1336_000750002 identified by Glimmer3 with a raw
FT                   score of 7.46."
FT   CDS             878828..878977
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000750002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000750002 identified by Glimmer3 with a raw
FT                   score of 7.46. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30227.1"
FT                   /translation="MIMKNRNLFLIARKFHTERNILFVQTYTKMVLALKLKTIILIKHP
FT                   VQTI"
FT   gap             879767..879866
FT                   /estimated_length=unknown
FT   gene            879880..879996
FT                   /locus_tag="C1336_000210000"
FT                   /note="C1336_000210000 identified by Glimmer3 with a raw
FT                   score of 7.25."
FT   CDS             879880..879996
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000210000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000210000 identified by Glimmer3 with a raw
FT                   score of 7.25. Gene function extrapolated from CJE1141
FT                   (CP000025.1) after blastn alignment (96.30 percent identity
FT                   over a 108 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31071.1"
FT                   /translation="MSLNISNSTSNPLPFKITKAIIKESLEELFSIECEGFF"
FT   gene            879980..881356
FT                   /locus_tag="C1336_000210001"
FT                   /note="C1336_000210001 identified by Glimmer3 with a raw
FT                   score of 10.08."
FT   CDS             879980..881356
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000210001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000210001 identified by Glimmer3 with a raw
FT                   score of 10.08. Gene function extrapolated from CJE1141
FT                   (CP000025.1) after blastn alignment (98.70 percent identity
FT                   over a 463 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31072.1"
FT                   /translation="MKAFFESLDESLFNLSQDFNFHPNVLIDQEAILSIHNPYENNTLN
FT                   FDTNEVKNYKGIITYIKYLGINHESALNINDSASNTKQIKYKHFFSFKLQSVLIRLSLN
FT                   KANRIYTHTNIIEVIKQTLGFYQDILHKEIDYSNIHFNYEEQELISQYNESDLDFIARL
FT                   SHNNGIFFYEDENTIYFCDVYKNVKNKEIEYNPNVNNILNQACISSIYKEQSLRTNSFT
FT                   HSSINANTPLNLLSLHSSKVPYEQELNNKAYYNEHFYESEYSFTKSIDLKTKPSLKEKR
FT                   ALVLNESLLAKSNIYHLSLGDFITLNYKEFNHQEEIKNQDEEKQDKASLLKDFIIIANT
FT                   QILIDDAILANSINTNDHLNLKDLNLSKSYSNTLTLLKKNIIFTPSFKAKKNCSFTADN
FT                   VNTMVNQESVLTAQKQIVSRVGNTTITQTKDKIILQVGTTQVIIDSKGLRVKGGDLRAD
FT                   "
FT   gene            881407..882276
FT                   /locus_tag="C1336_000210002"
FT                   /note="C1336_000210002 identified by Glimmer3 with a raw
FT                   score of 13.07."
FT   CDS             881407..882276
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000210002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000210002 identified by Glimmer3 with a raw
FT                   score of 13.07. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31073.1"
FT                   /translation="MKTLEEMQAMDEEAIRELGWEFFDLIKDNKLKEVKEFLKDYPVPE
FT                   VFLEKRRKVYWCNHPIPFFSPSSTLAWAGIAYDKSQNFEMMEYFESLGLKADDECLGNN
FT                   ALTSYIGVGGKNKKMIDYFFKKGCKFEVYDERGATPLHSWILLGDPESVNSLEVALQFG
FT                   ADVNMRNIKTEHEDSHIDAGKTLLHIAATSEEKPIGTCLEILIKYGADVNAANCTINEI
FT                   KDDKINYFKPNTPLDKAISFGINKNKTILKKAGAKTWEQLVKEYNIDTSLERPEQIKMY
FT                   EERRKIKK"
FT   gene            882292..884970
FT                   /locus_tag="C1336_000210003"
FT                   /note="C1336_000210003 identified by Glimmer3 with a raw
FT                   score of 10.29."
FT   CDS             882292..884970
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000210003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000210003 identified by Glimmer3 with a raw
FT                   score of 10.29. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31074.1"
FT                   /translation="MEFDVEILDNLENFKEFLKTKPSKEVLQAVNSHLEGFLSDAYDHI
FT                   DPEEYEVAFEEETGISYRDATEEEFDEWFITNVLCFEDLSEICKILRSLLEAKDLDKAL
FT                   ENFNKKSDKGLLKAINLDETLEKFDKKSDKRLLEAIKNARVLEAVRLINENPNIAIAED
FT                   ALEACEELLNSFYKKISSKKDGNDDSPYENILRHTGSAFGSLKPAAKKAANASSIAKLK
FT                   VLLRTILKGENAGEVLKKSGFSKVLFGKKPATQNQLYCPMNNVELIFLVRYAQDRKKYL
FT                   IAKVALDCINLIYLDSLYGAFECMERFDGIESWDVSHIKDFSRCFFCCSDMNVDLSKWN
FT                   VSKGQNFYLMFGHCENFNCDISSWNMSKAKNIDSMFYLCKEFNQNIDAWKVSVEAVIKS
FT                   KNIFKDSPLESNPPLWFKNAIDKINTPTGLEGILNLLNLNIEERRRKEEYSLFMIERLN
FT                   KVLEVFNATNAEKKLNDTDLAKIYKAAINSEYETDNITFIPFELIESTAKLAKNPQKVL
FT                   IGSKKEDYLKLALENGRPDIFKLLIEYGFDATKLLKSCSLLIDCWSKSIRHDYAFTACM
FT                   QDKKALQKRDNERKELLRLFIQQGYTFGDLYDAAARYSSSVSGFIMHVIANKYFSDDEL
FT                   QIVLTGRYSDNEAMPFVFALALQVEDSKNRNLAWKSLCYAIFLDMHKGVKSPKYKDKDH
FT                   QGLENLSFQEYIKEIIKRLADDNNVKIHFENLIEFMDLIEKIKDGQKIVVKNLILLNMF
FT                   VCIEEVNLSLLDVSQLKNLSYLFDDSTRGDFSGIESWDVSNVKNFEFCFSKAERFNADI
FT                   SKWNVGKGCYFTSMFEKARCFNADISKWNMSNAKSVSYMFTCASSFDRCLESWDISASV
FT                   SMDHMFWGTKIDSNRPKWYKH"
FT   gene            884993..885553
FT                   /locus_tag="C1336_000210004"
FT                   /note="C1336_000210004 identified by Glimmer3 with a raw
FT                   score of 11.08."
FT   CDS             884993..885553
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000210004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000210004 identified by Glimmer3 with a raw
FT                   score of 11.08. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31075.1"
FT                   /translation="MTREQAELIIEEEKLIDTDWYPSYKHAGEYHLTMWFDSDNNKYET
FT                   FYVGERGSVSLNYSFDSEKEAIDKMLKMNYRQKYFSVDENYSMQNRKEVALRIIKEEKL
FT                   EVIWYDEALKPLCAGIKHDKQRDKYISFITNAKAELIEYRSIEFDGDRYSKTFERMLND
FT                   EDIALYALINRARMIKQNRISFV"
FT   gap             886218..887148
FT                   /estimated_length=931
FT   gap             887928..889397
FT                   /estimated_length=1470
FT   gene            complement(889514..889654)
FT                   /locus_tag="C1336_000230000"
FT                   /note="C1336_000230000 identified by Glimmer3 with a raw
FT                   score of 7.79."
FT   CDS             complement(889514..889654)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000230000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000230000 identified by Glimmer3 with a raw
FT                   score of 7.79. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31069.1"
FT                   /translation="MLKKLNLHLASLSSSSNSKFSQGFLKRIVSVSSLRVKFIINPSGV
FT                   S"
FT   gene            889802..890434
FT                   /locus_tag="C1336_000230001"
FT                   /note="C1336_000230001 identified by Glimmer3 with a raw
FT                   score of 3.99."
FT   CDS             889802..890434
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000230001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000230001 identified by Glimmer3 with a raw
FT                   score of 3.99. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31070.1"
FT                   /translation="MLPQAIFLNKLIEFLSDENLDIVNMKKGVDKIFSKKDFYAILELN
FT                   IKIMNIAKLIFKSDEQLNILLPQASDYKNTNYFPQELELKKEMDVNLNDLKNCDNKKII
FT                   EIIKQEYQNNLIKELDINSQKEKIKILFIINEVPKFLKSIYKECEFKEYGLANYLEFDE
FT                   IWDFYENNIRYFTILTPMGANKIKLRLENTQNSEKELNIIEVNLDKK"
FT   gap             890573..891485
FT                   /estimated_length=913
FT   gene            891607..891831
FT                   /locus_tag="C1336_000240000"
FT                   /note="C1336_000240000 identified by Glimmer3 with a raw
FT                   score of 10.61."
FT   CDS             891607..891831
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000240000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000240000 identified by Glimmer3 with a raw
FT                   score of 10.61. Gene function extrapolated from CJE1142
FT                   (CP000025.1) after blastn alignment (93.33 percent identity
FT                   over a 90 bp alignment) - for clarity, the original product
FT                   name 'conserved domain protein' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31060.1"
FT                   /translation="MQTKVEEQYSLESDNSTFDFQTDCEVKAGNQILHQVGDTQIVTKG
FT                   DCVIIKAGGVEVTIDSKGLVVRGGELRAE"
FT   gene            891831..893276
FT                   /locus_tag="C1336_000240001"
FT                   /note="C1336_000240001 identified by Glimmer3 with a raw
FT                   score of 8.29."
FT   CDS             891831..893276
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000240001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000240001 identified by Glimmer3 with a raw
FT                   score of 8.29. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31061.1"
FT                   /translation="MEALNQKNSLNIRLLSSNNILLHNQEFKLYEIAQGNKKTIFTTNR
FT                   MREAHLNASEIFSKEAQSFELILNQSSVYKNKPIYNHRFLLRSYEYGHWCEIKFERKAD
FT                   KGPINSIRLKSKEFTLENNEKIARNFYTFGDIVEFEAIYEDTKIKEEQIKWGYVFIQDK
FT                   NTLDKLNKNQLTNDKKESSLFDEEILKDCFYIEKEEDKALLSSSIIHRHLDNKAYCGKS
FT                   LSLQLPNPKDTQEQKALLVFAYKEIPNYNASYLIRINDYPQITIDCTLAETHRAIKDLQ
FT                   KPSDIIDNSLYFQRFDIKNDVFLPHLGLSKFDAFPLQNSIQHEKEVLDKFHSNPKYKQN
FT                   FALYSIAGTFNILYIPSLIQITRVTRFYNYHSLYAACKKVRAFIINTVNFNNNGSDQLI
FT                   GAWDYEKVGFDLYNSIMQYRNTKFHFKYTSPKSFLFPLYNSDFLKTKQYFNLGLDFFLY
FT                   SSTFLDMDFSHTQMQDTAFIVRK"
FT   gene            893278..893889
FT                   /locus_tag="C1336_000240002"
FT                   /note="C1336_000240002 identified by Glimmer3 with a raw
FT                   score of 3.99."
FT   CDS             893278..893889
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000240002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000240002 identified by Glimmer3 with a raw
FT                   score of 3.99. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31062.1"
FT                   /translation="MFFAGGDYEPFIYGLSLIAYYFLPLYCLTLLLYKYKPQYVNLTLH
FT                   IGASALLYLAMWVIFVDTTIISLFEIFQMFLIPIILQIIHLTFILYAIIYTYFDMQKIS
FT                   FTKRLGRYIVSFFIGIGLLILSFVMMYAIGYYISSWCDRYYLKIDERNEAIRTITFYVL
FT                   VVVFPSIIALLLSYILYKNHKSFFTKILYRILSMIGKDKP"
FT   gene            894142..894306
FT                   /locus_tag="C1336_000240003"
FT                   /note="C1336_000240003 identified by Glimmer3 with a raw
FT                   score of 1.50."
FT   CDS             894142..894306
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000240003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000240003 identified by Glimmer3 with a raw
FT                   score of 1.50. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31063.1"
FT                   /translation="MIRFQSFCGFVCSKSFWIAWLFSYYLLFLIICITCEWELLTMYIC
FT                   GISLPLVYF"
FT   gene            894416..895159
FT                   /locus_tag="C1336_000240004"
FT                   /note="C1336_000240004 identified by Glimmer3 with a raw
FT                   score of 14.28."
FT   CDS             894416..895159
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000240004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000240004 identified by Glimmer3 with a raw
FT                   score of 14.28. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31064.1"
FT                   /translation="MQKFLIVLGLCLMLAISANAQSPKEAKPSFDCSKATTKVEKMICN
FT                   DEGGELQKLDRLYSKLYFSILKSIPKNTKEGQKTREKLKYFNHSVMSNRNIFQCYFVAP
FT                   FETKKQEDRQSNYCIKQIYLEAIATLAFKMIDSEANREKWGFNERMKDFVVPIENSNGA
FT                   YDMNIEFLPDYNLFNNFFENTTQSIVIDFMAYNIMQWNYFLVDVRINEANADLFDEAVE
FT                   KYKIYYEKLYQAFTKDKKLNKLLGN"
FT   gene            895239..895982
FT                   /locus_tag="C1336_000240005"
FT                   /note="C1336_000240005 identified by Glimmer3 with a raw
FT                   score of 12.92."
FT   CDS             895239..895982
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000240005"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000240005 identified by Glimmer3 with a raw
FT                   score of 12.92. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31065.1"
FT                   /translation="MQKFLIVLGLCLMLSISANAQSPKEAKPSFDCAKAKSKVEKMICN
FT                   DESGELQKLDRLYSKLYFSILKSIPKNTKEGQNAREKLKYFNIAVMKNRDTFQCYFAVE
FT                   EQEDFQLHSNDCIKQIYLEAIATLAFRMIDSEANRKKWNFNQKMEDFINIPIINKNGTY
FT                   DGINMNFLSNYNLFSKFFENTTQSVVVDFMAYNIAQWNYFITYSLRNEIGIYHFDMIVD
FT                   EYKEYYNDLYQAFTEDKKLNKLLGN"
FT   gene            896072..896809
FT                   /locus_tag="C1336_000240006"
FT                   /note="C1336_000240006 identified by Glimmer3 with a raw
FT                   score of 14.27."
FT   CDS             896072..896809
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000240006"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000240006 identified by Glimmer3 with a raw
FT                   score of 14.27. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31066.1"
FT                   /translation="MQKFLIVLGLCLMLAISANAQSPEEAKPSFDCSKATTKVEKMICN
FT                   DKSGELQKLDRLYSKLYFSILKSIPKNTKEGQNAREELKYFNHSVMSDRNIFQCYFIVP
FT                   FGTGKQEDFRSNYCIKQIYLEAIATLAFKMIDSEANRKKWNFNQRVEKFNGAACPLEKY
FT                   NEINFLSNYNLFNNFFENTTKGIVIDFMAYNIAQWNYFILQSRINEANSGEFDEAVKVY
FT                   KILYEKLYQAFTEDKKLNKLLGN"
FT   gene            896905..897888
FT                   /locus_tag="C1336_000240007"
FT                   /note="C1336_000240007 identified by Glimmer3 with a raw
FT                   score of 11.15."
FT   CDS             896905..897888
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000240007"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000240007 identified by Glimmer3 with a raw
FT                   score of 11.15. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31067.1"
FT                   /translation="MLQSPKEAKPSFDCAKASTEVEKIICNDEDGELQNLDRYMGEVYT
FT                   QLRKELKISNFADKEQRLKDLLDSQRAFIKNLNKVDFIKDAYEERITQLLKLLGEVLDS
FT                   NNKELCEYARRYESDDSKWQEVPPSVNPPFSIGYCAFGANNQYGIFYHYCTEKREIIKK
FT                   EMAKAIKEKDPYISFPRVYKRKIDINNDGVLDNVILSRGEYFSALWIYKNGKLDAKASG
FT                   KIYGDDLHFHGEKTSYQTVMVNEVPSIAFDTYALPSNKISGIPEQAEFNSEIPILSYLT
FT                   YGVMEFQGKNYITLWNRRFLNDENSTYPKTRIYLLEGNKRELKCTY"
FT   gene            897902..900406
FT                   /locus_tag="C1336_000240008"
FT                   /note="C1336_000240008 identified by Glimmer3 with a raw
FT                   score of 9.86."
FT   CDS             897902..900406
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000240008"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000240008 identified by Glimmer3 with a raw
FT                   score of 9.86. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31068.1"
FT                   /translation="MFETTKNLEYKKEALKIILASEGFKKLPYNDRAKNDNSGYLTIGY
FT                   GINLQIRNWLIATLNELGLFGSVKDLKSEKDIEALDNKDNKAMIDEFYNITKQVVTDTT
FT                   INNVRIQLNNLLKKYNGASSASFEITKEQGLNIKEIVSETIFNGVSAVNDKTLKMDEET
FT                   NEYAGILSYAFNVGDDSRKYFFDICNKDKDNRFLAFFTLRYGVNFSLNYKHNNKDKDKS
FT                   SYQKIFENSNVYGIAKRRFWESLFFGFEYKENRAFKMAIGIFKILNFKYTHRKVKDKHT
FT                   SKIKEISEYYVIDFQKEKPNQTYLDWIIKYEDELLYAKKNQNQTYQEFYNADARANNLP
FT                   EKFRNIQGITPNKDNFLSPYLSYLNTLTQKNFSLDNIYCIANYCENLGANKLDNVTLLN
FT                   KTLRQKFEKLEANTPHNILILYPNPTPSIIQIKQPKNTFITLLIGAKAKIDCSKLIEDQ
FT                   CELMYLKYDPTQEEQQAINPQAFSCSTQEELILKKEDEIYFKAVKNNISYFINKNDGIL
FT                   KVALAGNEENAIELYSFAKENQFKILQDKASKMLKIYLKLERYSSEEILSHRGGNFELT
FT                   LNNLKILDKNGNNHETITKVFLHNCENRRIYESLKLEYQEGIYKSSFKIDLILDENSSF
FT                   FKRATKCIIATKTLEGFSTSQIHKIGNVAIVSLSSADKKGGSYTFTNKVSMQDFGENLY
FT                   LDTEANGYEKQIKNSRKNLYITSLQAYKEKEQQNTTDKIPYNETIFVRAYLNNEEKFFF
FT                   DETIKWAYCIKKEEELECNQSKIKILENLQGNDIAFNTSMLSQDDRNILYNMNEKYQLI
FT                   LFAYFNTPAFKTTQGITHLVLK"
FT   gap             900608..900832
FT                   /estimated_length=225
FT   gene            900915..901181
FT                   /locus_tag="C1336_000250000"
FT                   /note="C1336_000250000 identified by Glimmer3 with a raw
FT                   score of 9.14."
FT   CDS             900915..901181
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250000 identified by Glimmer3 with a raw
FT                   score of 9.14. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30738.1"
FT                   /translation="MQTNNYIDIYTEQNLSTQTKKQHTELAESKYSDFQTDCEVKAGNQ
FT                   ILHQVGDTQIVTKGDCVIIKAGGVEVVIDSNGLVVRGGEIKAE"
FT   gene            901195..902010
FT                   /locus_tag="C1336_000250001"
FT                   /note="C1336_000250001 identified by Glimmer3 with a raw
FT                   score of 9.25."
FT   CDS             901195..902010
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250001 identified by Glimmer3 with a raw
FT                   score of 9.25. Gene function extrapolated from CJE1143
FT                   (CP000025.1) after blastn alignment (95.45 percent identity
FT                   over a 110 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30739.1"
FT                   /translation="MKKPFYKLKRFYIPCIIIIIIFAVLAKLLYSPLYTIYWGMYHYPK
FT                   VQLEFKNFEKMTLNPSPKDMIKIVNDYQPKLEDFKDLNVKMQKAIFDFKVAKLFGFEDR
FT                   YFEAFIKSCAGNFFVLHGKEQIYFNYLNFISGINSTSNEKQKYLNLRASTRDLERQIFE
FT                   EKLKFIKHYEEFYDYLEGVGYLDKGTEYIGTAISFKTLIQNVFLSNNAQLCSFEDRNLM
FT                   FKNMKENYEIFKNLDVKNIDDLKRNIYKKILIDMENLLNETQKALDECK"
FT   gene            902174..903436
FT                   /locus_tag="C1336_000250002"
FT                   /note="C1336_000250002 identified by Glimmer3 with a raw
FT                   score of 11.74."
FT   CDS             902174..903436
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250002 identified by Glimmer3 with a raw
FT                   score of 11.74. Gene function extrapolated from CJE1153
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 149 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30740.1"
FT                   /translation="MTPPPLPDVEKHKDFLQTRKEPYAIYLAINTNIKSYNNICPSEQY
FT                   FWKFNDMNELECYNPKFGIYLGKIVFDKKGNKLIPKYIATKFENLEEEVKKIKNPLWLA
FT                   NKNPNYIKPKFYDGMDGGYYFESPNNLEYQCKIEKDTQILSQEQIISYVKELYSKNTMI
FT                   IKNYIDAINKNHGIKPFVFSDEIYDQLGEVGILTKEQANNFKDKSYIKKNPILLAMLDY
FT                   LAKQNKKDEDYLITFDDEYFYADLVWSLKDFLLELSYGLFQDETKLLFNPAAYMDDTKI
FT                   DYKNLNEEINKRYEKILLDMGFEGENGYFNDYYDYGFGNNGIFKFSIYDYFAYDEIGVR
FT                   PIQQSPYVPPRSPFYSPNFVYSDGNYHGDAKLIPSALGKYYFELSYQKGVYIELLRPYY
FT                   PSIKDLPEGWDNKMLEKANLK"
FT   gene            903449..903661
FT                   /locus_tag="C1336_000250003"
FT                   /note="C1336_000250003 identified by Glimmer3 with a raw
FT                   score of 3.85."
FT   CDS             903449..903661
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250003 identified by Glimmer3 with a raw
FT                   score of 3.85. Gene function extrapolated from CJE1154
FT                   (CP000025.1) after blastn alignment (97.83 percent identity
FT                   over a 92 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30741.1"
FT                   /translation="MKKPFYKLKRFYIPCGVLIALIIFISLTYHFLQRPLELIFWDRYD
FT                   ISKLSINNKEKNFKTMKTVNYSYFR"
FT   gene            904171..904245
FT                   /locus_tag="C1336_000250335"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            904171..904245
FT                   /locus_tag="C1336_000250335"
FT                   /product="tRNA-Gly"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(904276..906207)
FT                   /locus_tag="C1336_000250004"
FT                   /note="C1336_000250004 identified by Glimmer3 with a raw
FT                   score of 11.43."
FT   CDS             complement(904276..906207)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250004"
FT                   /product="ABC transport system ATP-binding protein"
FT                   /note="C1336_000250004 identified by Glimmer3 with a raw
FT                   score of 11.43. Gene function extrapolated from Cj0888c
FT                   (AL111168.1) after blastn alignment (99.42 percent identity
FT                   over a 173 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30742.1"
FT                   /translation="MALIDLIEASKKFGDKIVLNEANFSANEGEKIAIIGKNGEGKTTF
FT                   LKTLLGTLPLDSGRVIRQNGKSIAMLSQTVDFNANLSVKEAIKQELAEIYNALEEYEIL
FT                   HKKLEEDPSNKDHLKKIDTLMTLIDSKDAWNIESKIIRVLKEFSLLEYESRIISTLSGG
FT                   EIRRVGLCILLLKNPDILLLDEPTNHLDVYMTSFLEELLKNSKMCVIFISHDRYFIDAI
FT                   AHKCVEIEQGKLSIFKGGYANYLEKKTQILQSLAKSHEALLKQLKSEEEWLRRGVKARL
FT                   KRNEGRKERIFKMREEAKKNPGAIKRLKLEISRAALNFNGEKTINRKKMLFELKNISKN
FT                   INNKNLFKDFSTRVLQGERIAIVGRNGCGKSTLLKILIGQIKQDSGEIKRGELKIGYFD
FT                   QARSLVNSDKSLLEIFCPNGGDRVEVRGKNMHVYGYLKNFLFPKEFLDKSVALLSGGEK
FT                   NRVALALLFTKEYDVLILDEPTNDLDIATINILEEYLLSFEGAILLVSHDRYFVDKIAT
FT                   KLYAFEGNGYINILHTLYTEYLENEKEIEELDNFALELQTQEQNNNQKEKSSKKLSYKE
FT                   NEILKNHPEKIDFLEQKIAKLNQDLSDPNVYQEIGINKLYQELEVMQKELEILENEYFL
FT                   VLEKSENL"
FT   gene            complement(906211..907500)
FT                   /locus_tag="C1336_000250005"
FT                   /note="C1336_000250005 identified by Glimmer3 with a raw
FT                   score of 11.23."
FT   CDS             complement(906211..907500)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250005"
FT                   /product="sensor histidine kinase"
FT                   /note="C1336_000250005 identified by Glimmer3 with a raw
FT                   score of 11.23. Gene function extrapolated from CJE0968
FT                   (CP000025.1) after blastn alignment (98.67 percent identity
FT                   over a 526 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30743.1"
FT                   /translation="MLKTKNIFIVFFVVLALIFGFIFYTFTNSYLNFLLIKQYEQKIKS
FT                   LDDVLKFSLLEHLNDANIKDFAKDTRADFIILNNDMKISSVKNPDFFSNFKEGEILNFN
FT                   SKKILTKSFIYKGYKYIIIVYPRFLDLELFWTKMAIGFGVCLLFVFILMLLLGRRIEKN
FT                   FNKILDFLDSIGDHKVVILEKGMFKEFNLLNEKLLKTKDKILKNTQKNKKQSDKITLKN
FT                   TQLASVISAISHELKNPLSVIDLSLEMLKDEELEDKKLKKELLEKISRQSIKLNALTHK
FT                   LNFVFNLNSEALQMQEFDLFSLCEKITKNPGFERVVLQGKSTKVKADEFLIEQVIINLL
FT                   SNALKYSQKEVILTARDQKIIVQDFGKGIEEDKIKLITKKFYKIDVKSDNSFGLGLFLV
FT                   KKILNIHKSYLEISSTLGYGSSFSFKLSQG"
FT   gene            complement(907494..908165)
FT                   /locus_tag="C1336_000250006"
FT                   /note="C1336_000250006 identified by Glimmer3 with a raw
FT                   score of 13.63."
FT   CDS             complement(907494..908165)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250006"
FT                   /product="putative sensory transduction transcriptional
FT                   regulator"
FT                   /note="C1336_000250006 identified by Glimmer3 with a raw
FT                   score of 13.63. Gene function extrapolated from C8J_0827
FT                   (CP000814.1) after blastn alignment (98.81 percent identity
FT                   over a 672 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30744.1"
FT                   /translation="MSNMLKFKILIIEDDIDLNELLVLKLKSSGYEVISLVDFFGVEDL
FT                   LDNEQIDLLIVDRNLPSGDSLEKIQDLREQGYKEAVIFLTAKALHQDLLEGFESGCDDY
FT                   VCKPFDFNELLLRIKAILKRHKKEEEKLSFGDFILDLANYEFFYKNQKLEISNLDYELL
FT                   KYFFENPNTLLTRQFLSESVWKDDTTSDKTINIALTRLRNKFPKLKDHIISVRGVGYKL
FT                   C"
FT   gene            complement(908143..909726)
FT                   /locus_tag="C1336_000250007"
FT                   /note="C1336_000250007 identified by Glimmer3 with a raw
FT                   score of 13.07."
FT   CDS             complement(908143..909726)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250007"
FT                   /product="D-3-phosphoglycerate dehydrogenase"
FT                   /note="C1336_000250007 identified by Glimmer3 with a raw
FT                   score of 13.07. Gene function extrapolated from
FT                   CJJ81176_0900 (CP000538.1) after blastn alignment (98.54
FT                   percent identity over a 1573 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30745.1"
FT                   /translation="MKKKIIVCDAILDKGVDILRKAEDIELIEAAKVPKDELMQMLSDV
FT                   EVAITRSSTDIDVNFLNHAKKLKALVRAGVGVDNVDIPECSKRGVIVMNVPTANTIAAV
FT                   ELTMAHLLTSARSFVNAHNFLKIERKWEREKWYGIELMNKTLGVIGFGNIGSRVAIRAK
FT                   AFGMKILAYDPYISASKITDLDMEQAKNLDEILEKSDFITIHTPKTKETNGMIGKQEIA
FT                   KMKDGIRLINCARGGLYTEEALYEGLKSGKIAWLGIDVFDKEPATNHPLLDFENISVTS
FT                   HLGANTLESQDNIAREACEQALSAARGVAYPNALNLPIKTEDLPPFVAPYIELVSKMAF
FT                   LAVQIDKNPIKSIKLEAEGIIGEYANSMLTFAAVGALGGILGEKINYVNAEFVAKEKGV
FT                   ELSCETLPNSGYNNKLSVKIITENSNISVSGTVFNENEQRIVGLNGFKTDFKPKGKMII
FT                   FKNKDIPGVIAKISSVLAAKNINIADFRLGRDGFGYALAVVLIDEKVQKEVLDELKQLE
FT                   ACVFVQYVEI"
FT   gene            complement(909723..910211)
FT                   /locus_tag="C1336_000250008"
FT                   /note="C1336_000250008 identified by Glimmer3 with a raw
FT                   score of 8.97."
FT   CDS             complement(909723..910211)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250008"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250008 identified by Glimmer3 with a raw
FT                   score of 8.97. Gene function extrapolated from
FT                   CJJ81176_0901 (CP000538.1) after blastn alignment (98.77
FT                   percent identity over a 489 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30746.1"
FT                   /translation="MKKYITISILSILLLILLAVVVTLLWQFKANVNFIPQFAKDTNTQ
FT                   PSIQTQNQDLSWQEELAKWPTRDFTPAAEKFTLYFDADTSELKEKNKYYQLIVGKYDIY
FT                   SMFCLRQTLNSFNVKYFLLKSGDSPEIFLDTGNEKLIDDIIKELKKYKINTEVKEIWL"
FT   gene            complement(910211..911881)
FT                   /locus_tag="C1336_000250009"
FT                   /note="C1336_000250009 identified by Glimmer3 with a raw
FT                   score of 12.26."
FT   CDS             complement(910211..911881)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250009"
FT                   /product="ribosomal protein S1"
FT                   /note="C1336_000250009 identified by Glimmer3 with a raw
FT                   score of 12.26. Gene function extrapolated from
FT                   CJJ81176_0902 (CP000538.1) after blastn alignment (98.79
FT                   percent identity over a 330 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30747.1"
FT                   /translation="MSEVNKKVQGGVDDYLEEEDFGLLLEAFDKSREETTTEGVIVEIK
FT                   NDEVYVDIGKKSEGILALSEIQDDNSKLLFNVGDSIKVAVMGSRGGRSLLSHKKALRKE
FT                   KVIEFIKNYQENQDDIFTVKVVGKNKGGLIVVDENDVEFFLPKSQYGFKETNNIIGKTF
FT                   KVKIIKIDKDEQSIIVSRKKTLDEERRKRKELINNVAQQEDLIEGIVKKITTYGMFVDV
FT                   GGVDGLVHYSEISYKGPVNPGTLYKEGDKVPVKVIKYDKERKHLSLSIKAALPDPWSEI
FT                   KDTLDVGDTIKVIVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKDYINKGQEID
FT                   VEVIEINPNERRLRVSLRNLLSRPFDEFMKSYKIADVVEGEITSVTSFGAFVRLGGIEG
FT                   LLHNEDASWDRNDKCKDKFSQGDKIKVKIIKIDEENQKISLSAKELSSSPVQEYAKIHK
FT                   VGDIVKGAIRDIKDFGVFVELSKNVDALIHKEDISTSMLENLKIGDDIEAAIVFIDEKK
FT                   NRIRLSVKNLVRMKEREVLNEINNDDKVTLGDIIKDQLT"
FT   gene            complement(912018..912851)
FT                   /locus_tag="C1336_000250010"
FT                   /note="C1336_000250010 identified by Glimmer3 with a raw
FT                   score of 12.38."
FT   CDS             complement(912018..912851)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250010"
FT                   /product="lytB-like protein"
FT                   /note="C1336_000250010 identified by Glimmer3 with a raw
FT                   score of 12.38. Gene function extrapolated from C8J_0831
FT                   (CP000814.1) after blastn alignment (98.50 percent identity
FT                   over a 133 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30748.1"
FT                   /translation="MIIELAKNYGFCFGVKRAIKKAEQIKDAATIGPLIHNNEEISRLQ
FT                   KNFNVKTLENIKALSNEKKAIIRTHGITKQDLEELRKKDIEIFDATCPFVTKPQQICEQ
FT                   MSKEGYEVVIFGDENHPEVKGVKSYVSTKAYVVLDKKELQHIKLPNKIAVVSQTTKKPE
FT                   HFMEIVNFLILKTKEVRVFNTICDATFKNQDAIKELSLKSDVMVVVGGKNSANTKQLFL
FT                   IAKTNCEDSYLIETEEELKKEWFLDKKHCGISAGASTPDWIIQKVIAKIENFKIN"
FT   gene            complement(912841..914127)
FT                   /locus_tag="C1336_000250011"
FT                   /note="C1336_000250011 identified by Glimmer3 with a raw
FT                   score of 13.77."
FT   CDS             complement(912841..914127)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250011"
FT                   /product="3-phosphoshikimate 1-carboxyvinyltransferase"
FT                   /note="C1336_000250011 identified by Glimmer3 with a raw
FT                   score of 13.77. Gene function extrapolated from C8J_0832
FT                   (CP000814.1) after blastn alignment (98.64 percent identity
FT                   over a 513 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30749.1"
FT                   /translation="MKIYKLQTPVNATLENIAADKSISHRFAIFSLLTQEENKAQNYLL
FT                   AQDTLNTLEIIKNLGAKIEEKDSCVKIIPPKEILSPNCILDCGNSGTAMRLMIGFLAGI
FT                   SGFFVLSGDKYLNNRPMRRISKPLTQIGARIYGRNEANLAPLCIEGQKLKAFNYKSEIS
FT                   SAQVKTAMILSAFRADNICTFSEISLSRNHSENMLKAMKAPIRVSNDGLSLEISPLKKP
FT                   LKAQNIIIPNDPSSAFYFVLAAIILPKSQIILKNILLNPTRIEAYKILQKMGAKLEMTI
FT                   TQNDFETIGEIRVESSKLNGIEVKDNIAWLIDEAPALAIAFALAKGKSSLINAKELRVK
FT                   ESDRITAMVENLKLCGVEARELDDGFEIEGRCELKSSKIKSYGDHRIAMSFAILGLLCG
FT                   VEIDDSDCIKTSFPNFIEILSNLGARIDY"
FT   gene            complement(914124..916445)
FT                   /locus_tag="C1336_000250012"
FT                   /note="C1336_000250012 identified by Glimmer3 with a raw
FT                   score of 11.74."
FT   CDS             complement(914124..916445)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250012"
FT                   /product="phenylalanyl-tRNA synthetase, beta subunit"
FT                   /note="C1336_000250012 identified by Glimmer3 with a raw
FT                   score of 11.74. Gene function extrapolated from
FT                   CJJ81176_0905 (CP000538.1) after blastn alignment (98.07
FT                   percent identity over a 1658 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30750.1"
FT                   /translation="MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDKV
FT                   VVGYVKEKIKHENSDKLSICQVDIGSETLQIVCGAANVDAGQFVAVATKGAIMPNGMEI
FT                   KEAKLRGVDSCGMLCSSLELGFEKINEGIMLLDESIGKLELGRPLNTYEIFNDELIEVE
FT                   LTPNRGDCLSIYGIARDLATALNLNLKEPKPFKESENVLGIGRILRLAAEKELNGLYNY
FT                   RAIELKEEIQTNLLLSLRLAQIESLGKNSIENLLNYATHSTGVLFNAYDLSSFSEKDEE
FT                   FTINLSKQMHGETKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLVIADAKI
FT                   YHKDQDEKILYRSFRGSEPKLNLGMDFLLSIFEQIPNLVIYSSSQQILTDKELPIIPIS
FT                   IESIGDIIGQNVDKDEVLKILKKLGFELILSGEGLINVKAPLHRPDIKNLSDICEEVVR
FT                   IIGIDNIASKGLEFVEKNRLNSAYKNYIEFLNLRKRAVASGYFESLHYVLDNEEELKRL
FT                   GFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELGVVFNVNNQEL
FT                   NRIAFIHSGLKEEAKISNKAKPESVQFYDFLLDIKNIIGDFKLKSSKYNILSPYEQADI
FT                   YLSNIKVGFIGRLHLKIENERDLPKTYICELDLDLIKQDFKIAKPYSKFPAITRDLSVL
FT                   IPKGFEYNQIKNCIEELNLEILENFRLVDIYSDENLKEFYSITMSFSFRDINKTLEDNQ
FT                   VNECMGKILNTLKNLGLDLR"
FT   gene            complement(916442..917434)
FT                   /locus_tag="C1336_000250013"
FT                   /note="C1336_000250013 identified by Glimmer3 with a raw
FT                   score of 12.59."
FT   CDS             complement(916442..917434)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250013"
FT                   /product="phenylalanyl-tRNA synthetase alpha chain"
FT                   /note="C1336_000250013 identified by Glimmer3 with a raw
FT                   score of 12.59. Gene function extrapolated from C8J_0834
FT                   (CP000814.1) after blastn alignment (98.89 percent identity
FT                   over a 993 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30751.1"
FT                   /translation="MQNFIEQIQKCENLNDLEAIRISVLGKKGILTEGFTKLKELEDEA
FT                   KKEFAAKLNAQKEIFNEAYLAKFKDLENLALEERMKQDALNFNYFDESITTGALHPVMS
FT                   TMDKIIEYFIALNFSIEKGPLIEDDFHNFEALNLPKSHPARDMQDTFYFDDKRLLRTQT
FT                   SPVQIRTMLTQKPPIRMIAPGAVFRRDFDITHTPMFHQVEGLVVEEGRKVSFANLKSVL
FT                   EDFLRYMFGDVKVRFRPSFFPFTEPSAEVDISCVFCKGKGCRVCKHTGWLEVLGCGIVD
FT                   PNVYNFVGYENVSGYAFGLGVERFAMLLHQIPDLRSLFEGDLRLLEQFR"
FT   gene            917558..917923
FT                   /locus_tag="C1336_000250014"
FT                   /note="C1336_000250014 identified by Glimmer3 with a raw
FT                   score of 11.70."
FT   CDS             917558..917923
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250014"
FT                   /product="HIT family protein"
FT                   /note="C1336_000250014 identified by Glimmer3 with a raw
FT                   score of 11.70. Gene function extrapolated from
FT                   CJJ81176_0907 (CP000538.1) after blastn alignment (98.48
FT                   percent identity over a 328 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30752.1"
FT                   /translation="MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIPK
FT                   KHFKDFQEFNPELMAKMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHMLGG
FT                   FELPKEKTKKENPQALF"
FT   gene            complement(917953..918522)
FT                   /locus_tag="C1336_000250015"
FT                   /note="C1336_000250015 identified by Glimmer3 with a raw
FT                   score of 12.75."
FT   CDS             complement(917953..918522)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250015"
FT                   /product="4-methyl-5(B-hydroxyethyl)-thiazole monophosphate
FT                   biosynthesis enzyme"
FT                   /note="C1336_000250015 identified by Glimmer3 with a raw
FT                   score of 12.75. Gene function extrapolated from
FT                   CJJ81176_0908 (CP000538.1) after blastn alignment (98.25
FT                   percent identity over a 570 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30753.1"
FT                   /translation="MSKKVLIPLAQGFEEAEFIGIADVLKRARELNPDLEVVIASLNSE
FT                   LLVKGANGISIKADCSIEDVDIENLDAIALAGGFEGMMNLKNSNVILNIIKQLHSNNKI
FT                   VAAICASPIVLNEAGVLEGEFACYPSCEVGLNGNRVNKAVVVNKNVITSAGPATAILFG
FT                   LELAKKLCGDEIYQKLYEGMLLPLTK"
FT   gene            complement(918515..918661)
FT                   /locus_tag="C1336_000250016"
FT                   /note="C1336_000250016 identified by Glimmer3 with a raw
FT                   score of 11.43."
FT   CDS             complement(918515..918661)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250016"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250016 identified by Glimmer3 with a raw
FT                   score of 11.43. Gene function extrapolated from CJE0979
FT                   (CP000025.1) after blastn alignment (97.65 percent identity
FT                   over a 85 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30754.1"
FT                   /translation="MEILDFILIVIFVFLMIVLVIGFNHQMMQKNKEREERFKKYKKGE
FT                   QNE"
FT   gene            918776..919519
FT                   /locus_tag="C1336_000250017"
FT                   /note="C1336_000250017 identified by Glimmer3 with a raw
FT                   score of 6.44."
FT   CDS             918776..919519
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250017"
FT                   /product="amino acid ABC tansporter, permease protein,
FT                   His/Glu/Gln/Arg/opine family"
FT                   /note="C1336_000250017 identified by Glimmer3 with a raw
FT                   score of 6.44. Gene function extrapolated from
FT                   CJJ81176_0910 (CP000538.1) after blastn alignment (99.62
FT                   percent identity over a 260 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30755.1"
FT                   /translation="MNQKNIRIFVFFVIIILWGYFSFPIEILKIQDPSGVVSYGYTENA
FT                   KAYLKSYLITLLLTACAVIIGVIIGFSLAILRFSKFKTLNFIIDEYIDIIRGTPVILQL
FT                   MIFAFVIFTFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSM
FT                   KEIILPQATKNILPALANEFISLFKETSVVGFISVVDITMQSQSLQAVLYNPKPIIFTG
FT                   LVYYVSVKIFSYFAKKLELRMNKND"
FT   gene            919512..920243
FT                   /locus_tag="C1336_000250018"
FT                   /note="C1336_000250018 identified by Glimmer3 with a raw
FT                   score of 11.17."
FT   CDS             919512..920243
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250018"
FT                   /product="glutamine transport system ATP-binding protein"
FT                   /note="C1336_000250018 identified by Glimmer3 with a raw
FT                   score of 11.17. Gene function extrapolated from C8J_0839
FT                   (CP000814.1) after blastn alignment (99.12 percent identity
FT                   over a 341 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30756.1"
FT                   /translation="MIEVKNLQKKYGELEVLKNINTTISKGDVIAIIGPSGGGKSTFLR
FT                   CINRLEVADSGEILINKQNILDKEIDINKIRQKVSMVFQHFNLFANKNVMENLCLTPIK
FT                   TGILSQEEAIKKAKILLAKVGLADKENIMPHKLSGGQKQRIAIARSLMMNPDVILFDEP
FT                   TSALDPEMIGEVLSIMKDVAKEGLTMLVVTHEMGFARNVANRIFFMDKGKIAVDASPKE
FT                   VFENPSNERLREFLNKVLNHS"
FT   gene            complement(920264..921730)
FT                   /locus_tag="C1336_000250019"
FT                   /note="C1336_000250019 identified by Glimmer3 with a raw
FT                   score of 12.32."
FT   CDS             complement(920264..921730)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250019"
FT                   /product="amino acid carrier protein"
FT                   /note="C1336_000250019 identified by Glimmer3 with a raw
FT                   score of 12.32. Gene function extrapolated from
FT                   CJJ81176_0912 (CP000538.1) after blastn alignment (99.49
FT                   percent identity over a 984 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30757.1"
FT                   /translation="MNLDIILDFANKASDIIANKIVPNTDIIMVVLLIVCGLYYSFLTR
FT                   FVQFRMLSSVFKILTEKNEGHTKEHISPFQALMISTASRVGIGNIAGISLALATGGAGA
FT                   LFWMWVMAFFGGASAFAESTLAQVYKSKDDTGGFKGGPAYYIKKALGSHFFGAFFAFIL
FT                   IITYAYGFNGLQSQTMTSSFKVYYDMFNPNAAVDFASSSWPMIIGIVLTIFGAWMFFSH
FT                   HTKIGKISSLIVPFMALAYVLLAVIAVLMNFDKIPSVVHMILQSAFDFKAIFGGFAGSA
FT                   LVIGIKRGLFSNEAGMGSAPNAAAAALTSHPAKQGVIQAFSVLIDVVVCTSSGFLVLFS
FT                   MAYLGLGESKIDGGMPLVQEAMREYYGSFGIHFITIAIVLFAITSLIGNYYYAQANVKY
FT                   LTNSKFVMNLFRITAVAMIFIGSQMNLKLAWNLADLTMAFMATTNIISLLLLGGIVNKV
FT                   LKDFNTQQKSGIDPKFNASKLGIKNAECWD"
FT   gene            complement(921834..922301)
FT                   /locus_tag="C1336_000250020"
FT                   /note="C1336_000250020 identified by Glimmer3 with a raw
FT                   score of 12.12."
FT   CDS             complement(921834..922301)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250020"
FT                   /product="RNA methyltransferase, TrmH family"
FT                   /note="C1336_000250020 identified by Glimmer3 with a raw
FT                   score of 12.12. Gene function extrapolated from
FT                   CJJ81176_0913 (CP000538.1) after blastn alignment (98.08
FT                   percent identity over a 468 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30758.1"
FT                   /translation="MFNIVLIHPRIPQNTGSIGRMCFNAGFKLHIVKPTVFDISQKAVR
FT                   RAGLDYWDKLEPIIWENLEEFLNENIIYKNRFFFATTKSQKAYFDAEFQKNDFLFFGSE
FT                   SYGLPMELMQLNWENAITIPMKSYGRSLNLATSVGIISYEALRQNFSNFVS"
FT   gene            complement(922304..923290)
FT                   /locus_tag="C1336_000250021"
FT                   /note="C1336_000250021 identified by Glimmer3 with a raw
FT                   score of 10.21."
FT   CDS             complement(922304..923290)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250021"
FT                   /product="alanine racemase"
FT                   /note="C1336_000250021 identified by Glimmer3 with a raw
FT                   score of 10.21. Gene function extrapolated from C8J_0842
FT                   (CP000814.1) after blastn alignment (98.93 percent identity
FT                   over a 467 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30759.1"
FT                   /translation="MSLIKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLA
FT                   PLAKNLGVSFVAVKSEEEAQEIEEFFENILILSHRPHGNENSRFIYALNDISQVKKYKQ
FT                   DIKIHLKIDTGMHRNGICVENLEHAINLIRSSDLKLTGMFTHFASADEMDGSFFVQKEN
FT                   FQKAKKIVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGESNLKRVLSLYAH
FT                   RLSQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFRYNGKGELVLGNGKVILGKM
FT                   SMDSFSCENSGEEICVFKDADIWADFFHTINYEILVKLNPNIQRVLV"
FT   gene            complement(923291..924268)
FT                   /locus_tag="C1336_000250022"
FT                   /note="C1336_000250022 identified by Glimmer3 with a raw
FT                   score of 10.03."
FT   CDS             complement(923291..924268)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250022"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250022 identified by Glimmer3 with a raw
FT                   score of 10.03. Gene function extrapolated from CJE0985
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 367 bp alignment) - for clarity, the
FT                   original product name 'conserved hypothetical protein' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30760.1"
FT                   /translation="MLKRLTLLITLSSLMLHASDLVKIYLNQGLDAVGVAIEKELTQKD
FT                   FWLSEIGDKNISLGYYDDNVAIVLANKTDKILRVYSYEDGKIRKDFEQKEIITGLMGDK
FT                   KIEGDLKTPVGFYELGRKFNPGDPYYGPFAFATTYPNLLDKVQGKTGGGIWIHGYPLDG
FT                   SRLDEFKTRGCIALFNNNLEKFAQVVQDKKVFVMTEEKEKTRAKKDQIASLLADLFTWK
FT                   LAWTNSDTNTYLSFYDEQEFKRFDKMKFEQFASMKKSIFSRKEDKKIKFSDINISPYPN
FT                   LENETMYRISFYEDYYTKNYQFRGDKILYVKIDSKGKMKILAEQ"
FT   gene            924976..925395
FT                   /locus_tag="C1336_000250023"
FT                   /note="C1336_000250023 identified by Glimmer3 with a raw
FT                   score of 11.57."
FT   CDS             924976..925395
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250023"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250023 identified by Glimmer3 with a raw
FT                   score of 11.57. Gene function extrapolated from
FT                   CJJ81176_0917 (CP000538.1) after blastn alignment (96.83
FT                   percent identity over a 410 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30761.1"
FT                   /translation="MKKILLLGALFAVNLWAVNDIEVKNAFVKQTPPHAQNSAIFLTIF
FT                   NNTDKDIALIGVKSDISEASELHTHIHKDGKMMMQKIPEIIIKAHSSTELKSGSYHIML
FT                   LKLKKPIIKDTKVKLDLKFNNHKTIELKNIDSKEF"
FT   gene            925399..925851
FT                   /locus_tag="C1336_000250024"
FT                   /note="C1336_000250024 identified by Glimmer3 with a raw
FT                   score of 6.77."
FT   CDS             925399..925851
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250024"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000250024 identified by Glimmer3 with a raw
FT                   score of 6.77. Gene function extrapolated from C8J_0846
FT                   (CP000814.1) after blastn alignment (98.10 percent identity
FT                   over a 368 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30762.1"
FT                   /translation="MRKIIFILAFAFVIATLYIIFDFYIIKDSQKITKADFSTPLTCDL
FT                   NVKDCTYSFNNKEVLISLNPKPLQSLDVTNLKIVNLGNYNNLGIKIYGLNMYMGEIKPK
FT                   IHRLNLTDYESKIVLATCVLDTMRFRVEFMDNNKPIGFYFDFELKK"
FT   gene            925848..926408
FT                   /locus_tag="C1336_000250025"
FT                   /note="C1336_000250025 identified by Glimmer3 with a raw
FT                   score of 9.21."
FT   CDS             925848..926408
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250025"
FT                   /product="SCO1/SenC family protein"
FT                   /note="C1336_000250025 identified by Glimmer3 with a raw
FT                   score of 9.21. Gene function extrapolated from
FT                   CJJ81176_0919 (CP000538.1) after blastn alignment (99.29
FT                   percent identity over a 141 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30763.1"
FT                   /translation="MKKNIILFIVIVAIILGVIFFIKNHQNSYDFILKSDLKEEATLKD
FT                   FKGDKLIIYFGYTYCPDVCPATLSLVGKALKQINNPKAHLLFISLDLNRDNNLSNTNEW
FT                   LRYFYPKADALIAKDEKTLQKITKQYNVQYQKIDLNDSFMGYSIAHSNMLYLINEKGHF
FT                   YKEISDLNPQEILRELRIFLNSQ"
FT   gene            complement(926415..927314)
FT                   /locus_tag="C1336_000250026"
FT                   /note="C1336_000250026 identified by Glimmer3 with a raw
FT                   score of 10.98."
FT   CDS             complement(926415..927314)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250026"
FT                   /product="cysteine synthase A"
FT                   /note="C1336_000250026 identified by Glimmer3 with a raw
FT                   score of 10.98. Gene function extrapolated from
FT                   CJJ81176_0920 (CP000538.1) after blastn alignment (98.69
FT                   percent identity over a 762 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30764.1"
FT                   /translation="MKVHEKVSELIGNTPIMHLKKFGINVFAKCEFLNPSHSIKDRAAF
FT                   EMIKDALDSKKINQDTTIVEATSGNTGISLAMICADLGLKFIAVMPESMSLERRKMITL
FT                   FGARLELTPANLGMKGAVDKANEILLNTPNSFMISQFENISNKNAHRKNTALEILRDLD
FT                   NKLDIFVAGFGTGGTISGVGEILKEKLEKVHIVGVEPLNSPLLSKGEAGSHKIQGIGAN
FT                   FIPAILNKEVIDEVITVSNEDAINTAKELAKSGLMVGISSGANVFAASMLAKKFPDKRI
FT                   LTMLNDTAERYLSTDLFA"
FT   gene            complement(927441..927737)
FT                   /locus_tag="C1336_000250027"
FT                   /note="C1336_000250027 identified by Glimmer3 with a raw
FT                   score of 11.33."
FT   CDS             complement(927441..927737)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250027"
FT                   /product="DNA-binding protein HU"
FT                   /note="C1336_000250027 identified by Glimmer3 with a raw
FT                   score of 11.33. Gene function extrapolated from
FT                   CJJ81176_1731 (CP000538.1) after blastn alignment (99.56
FT                   percent identity over a 229 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30765.1"
FT                   /translation="MTKADFISLVAQTAGLTKKDATTATDAVISTITDVLAKGDSISFI
FT                   GFGTFSTQERAAREARVPSTGKTIKVPATRVAKFKVGKNLKEAVAKASNKKKK"
FT   gene            complement(927839..929671)
FT                   /locus_tag="C1336_000250028"
FT                   /note="C1336_000250028 identified by Glimmer3 with a raw
FT                   score of 12.83."
FT   CDS             complement(927839..929671)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250028"
FT                   /product="invasion antigen B"
FT                   /note="C1336_000250028 identified by Glimmer3 with a raw
FT                   score of 12.83. Gene function extrapolated from
FT                   JJD26997_0900 (CP000768.1) after blastn alignment (99.56
FT                   percent identity over a 229 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30766.1"
FT                   /translation="MNNFKEIAKLVRKYKERNNALYEFLDKEDVGEYFRSLISLSELKQ
FT                   DKTTMLAILRRLVDLKEENLVQEWKKNNFKEDKIIELKHKFYEEIRKFYEKEHQNLINE
FT                   IKEKKLLNNFYQSLIQGVHNIGLIMNIFEISWTKEIIEKNNKILSTQFPNLDDAMEFLR
FT                   KNHLYQKTSEGEICERSYGVLVRIGNLWKFVPYARFFENEILKLEFAFENMIDQLKTFA
FT                   SNEEEKAYIEYFEKLKLAFCEKDEDRIIKAWQEAEFAWMKVKSPLQVGHPLEYYEDNYT
FT                   HAVALEWDIRIEDENDFDVLKFGSEIKESFEYVYKNIGLEDCDLEKEVLSNIEKTQLYI
FT                   CTPMIFYGAELKGLFSAQVVPNDEFISSRAGKKIFAFINFVYENAKTKPFMKISSEVFD
FT                   KEFLDFGRNILFYQEKIWKRVYEVSTIGHEFGHMFFIANDTEKTMNQSGFFKNIEEYKA
FT                   TAGGLINFFYHEQDDLIMPVFHELIKRAIGLISWQRVDEVRPYYTEGLIHLSLLFESEV
FT                   LIFENNNLKINFDLGHYEKFKELTLKNYHELAKHYALRLDAKEFLSRFCEIEDDIFLPI
FT                   MPKCKEFVKFYYDLYEKIGNEIDNSGEFERYKKK"
FT   gene            929733..930146
FT                   /locus_tag="C1336_000250029"
FT                   /note="C1336_000250029 identified by Glimmer3 with a raw
FT                   score of 14.60."
FT   CDS             929733..930146
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250029"
FT                   /product="thioesterase family protein"
FT                   /note="C1336_000250029 identified by Glimmer3 with a raw
FT                   score of 14.60. Gene function extrapolated from CJE0993
FT                   (CP000025.1) after blastn alignment (98.79 percent identity
FT                   over a 414 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30767.1"
FT                   /translation="MRDMGEPKLKIVAMPSDTNPAGNIFGGWILSQIDLAGAIAARELS
FT                   PERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSCIN
FT                   VTSALVTYVSVTRDGKKKPISEELKRIHGFLNA"
FT   gene            complement(930186..930326)
FT                   /locus_tag="C1336_000250030"
FT                   /note="C1336_000250030 identified by Glimmer3 with a raw
FT                   score of 5.70."
FT   CDS             complement(930186..930326)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250030"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250030 identified by Glimmer3 with a raw
FT                   score of 5.70. Gene function extrapolated from
FT                   CJJ81176_0923 (CP000538.1) after blastn alignment (99.29
FT                   percent identity over a 141 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30768.1"
FT                   /translation="MVGLSSYDKYLEHMKQKHPGKIPKTRGEFFKECLDKKYNSGGLNK
FT                   C"
FT   gene            complement(930364..932475)
FT                   /locus_tag="C1336_000250031"
FT                   /note="C1336_000250031 identified by Glimmer3 with a raw
FT                   score of 14.76."
FT   CDS             complement(930364..932475)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250031"
FT                   /product="carbon starvation protein A"
FT                   /note="C1336_000250031 identified by Glimmer3 with a raw
FT                   score of 14.76. Gene function extrapolated from CJE0995
FT                   (CP000025.1) after blastn alignment (98.82 percent identity
FT                   over a 169 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30769.1"
FT                   /translation="MTQLSTKILWLLVATLGAICFGYLALKNGESVSAIYLVVAAVCIY
FT                   MIGYRFYGHFVAYKVLELDKNRATPALVENDGRDFVPTNKAVLFGHHFAAIAGAGPLVG
FT                   PILAAQMGYLPSMLWILVGGVLAGAVHDFVVLFISTRRKGRSLGEMIKDEMGKFTGGVA
FT                   MMAIFGIMLIIIAILAMVVVKALAESPWGLFTIAMTIPIAIFMGIYMRFIRPGRVGEAS
FT                   IIGFVLLILAIHYGSVVAADPYWAKIFTLEAPTLAVVMMAYGFIASVLPVWFLLAPRDY
FT                   LSTFLKIGVIVVMAVAIVLVTPDLQMPKANTQYFDGTGPVFAGGVFPFLFITIACGAIS
FT                   GFHALISSGTTPKMLENETHALAVGYGSMLAESAVAIMALICACILHPGLYFAINSSSA
FT                   LIGTDVVSVAQTISSWGFSITPEEITTLTTNIGEHTILSRTGGASTFAIGVALILHELF
FT                   GGVDLMAFWYHFAILFEALFILTAVDAGTRACRFMVQDILGNVYKPLGDIHNYLAGLLA
FT                   TALSVAGWGYFLYQGAIDPKGGIYTLWPLFGVSNQMLAGMALLLATTILVKMGKARYTW
FT                   VTLIPAVFVLVATLYGGIQKIMPYKEGNKVANAVSHVAAVSIQSQKIKDLEFKLNNTKD
FT                   EKEISTIKKEILIATQSKVGNLLNAILCVFFMIATLLVIISCIGICLGKIKIPLKETKY
FT                   IKIDEFQKI"
FT   gene            complement(932641..933570)
FT                   /locus_tag="C1336_000250032"
FT                   /note="C1336_000250032 identified by Glimmer3 with a raw
FT                   score of 12.83."
FT   CDS             complement(932641..933570)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250032"
FT                   /product="ribose-phosphate pyrophosphokinase"
FT                   /note="C1336_000250032 identified by Glimmer3 with a raw
FT                   score of 12.83. Gene function extrapolated from C8J_0855
FT                   (CP000814.1) after blastn alignment (97.85 percent identity
FT                   over a 930 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30770.1"
FT                   /translation="MRGYKIFSGSANVEFARQVSKYLSLPLSDAGVKRFSDGEISVQID
FT                   ESVRGKDVFIIQSTCAPTNDNLMELLILTDALRRSSANSITAIIPYFGYARQDRKANPR
FT                   VPITAKLVANLIQAAGIDRVATIDLHAGQIQGFFDIPVDNLYGSIVFNDYIKAKHFKNA
FT                   IIGSPDIGGVARARSVAKHLGLDIVIVDKRREKANESEVMNIIGDVKDKEVILVDDIID
FT                   TAGTIVKAAEALKEKGAKSVMACCTHAVLSGKAYERIASGALDELVVTDTIPLKEQLPN
FT                   IKVLSVTSVFAEVIRRVYHNESVNSLFI"
FT   gene            complement(933678..934337)
FT                   /locus_tag="C1336_000250033"
FT                   /note="C1336_000250033 identified by Glimmer3 with a raw
FT                   score of 10.94."
FT   CDS             complement(933678..934337)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250033"
FT                   /product="putative polar amino acid transport system
FT                   permease protein"
FT                   /note="C1336_000250033 identified by Glimmer3 with a raw
FT                   score of 10.94. Gene function extrapolated from C8J_0856
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 371 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30771.1"
FT                   /translation="MENVFNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLAITKNYG
FT                   DRLSKFLAACYIDIFRNTPLLLWMLAACFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEI
FT                   IRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAG
FT                   LGIAELTYNSKTILAKLRSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTAYIS"
FT   gene            complement(934348..935100)
FT                   /locus_tag="C1336_000250034"
FT                   /note="C1336_000250034 identified by Glimmer3 with a raw
FT                   score of 13.05."
FT   CDS             complement(934348..935100)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250034"
FT                   /product="amino acid ABC transporter, permease protein
FT                   PEB1"
FT                   /note="C1336_000250034 identified by Glimmer3 with a raw
FT                   score of 13.05. Gene function extrapolated from
FT                   CJJ81176_0927 (CP000538.1) after blastn alignment (99.47
FT                   percent identity over a 753 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30772.1"
FT                   /translation="MNESVGFVEHLRQILTSWGLYDENSISPFAVWKFLDALDNKDAFI
FT                   NGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFFLF
FT                   YALPVLGIRLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMR
FT                   YIIVPQTIRIILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFAA
FT                   VLYFIICYPLAYFAKAYENKLKKAHLTR"
FT   gene            complement(935102..935881)
FT                   /locus_tag="C1336_000250035"
FT                   /note="C1336_000250035 identified by Glimmer3 with a raw
FT                   score of 14.73."
FT   CDS             complement(935102..935881)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250035"
FT                   /product="amino acid ABC transporter, periplasmic amino
FT                   acid-binding protein PEB1"
FT                   /note="C1336_000250035 identified by Glimmer3 with a raw
FT                   score of 14.73. Gene function extrapolated from C8J_0858
FT                   (CP000814.1) after blastn alignment (99.10 percent identity
FT                   over a 780 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30773.1"
FT                   /translation="MVFRKSLLKLAVFALGACVAFSNANAAEGKLESIKSKGQLIVGVK
FT                   NDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVAVNAKTRGPLLDNGSVDA
FT                   VIATFTITPERKRIYNFSEPYYQDAIGLLVLKEKNYKSLADMKGANIGVAQAATTKKAI
FT                   GEAAKKIGIDVKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDDKSEILPDSFEPQ
FT                   SYGIVTKKDDPAFAKYVDDFVKEHKSEIDALAKKWGL"
FT   gene            complement(935903..936631)
FT                   /locus_tag="C1336_000250036"
FT                   /note="C1336_000250036 identified by Glimmer3 with a raw
FT                   score of 10.12."
FT   CDS             complement(935903..936631)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250036"
FT                   /product="ABC-type amino-acid transporter ATP-binding
FT                   protein"
FT                   /note="C1336_000250036 identified by Glimmer3 with a raw
FT                   score of 10.12. Gene function extrapolated from Cj0922c
FT                   (AL111168.1) after blastn alignment (99.68 percent identity
FT                   over a 313 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30774.1"
FT                   /translation="MIELKNVNKYYGTHHVLKNINLSVKEGEKLVIIGPSGSGKSTTIR
FT                   CMNGLEEVSSGEVVVNNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPMKL
FT                   QKKSKKEAEETAFKYLKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPT
FT                   SALDPETIQEVLDVMKEISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEENIPSE
FT                   FFSNPKTERARLFLGKILKN"
FT   gene            complement(936767..937555)
FT                   /locus_tag="C1336_000250037"
FT                   /note="C1336_000250037 identified by Glimmer3 with a raw
FT                   score of 9.52."
FT   CDS             complement(936767..937555)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250037"
FT                   /product="putative MCP protein methyltransferase"
FT                   /note="C1336_000250037 identified by Glimmer3 with a raw
FT                   score of 9.52. Gene function extrapolated from C8J_0860
FT                   (CP000814.1) after blastn alignment (99.36 percent identity
FT                   over a 776 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30775.1"
FT                   /translation="MEKKITPSELELNEFIKIINEMSGIDLTDKKNILALKLNKFLEGT
FT                   NTKNFSEFLGKLKSNRQLKQETLDFVTIGETYFLRELAQLKEIIYYAKSLEKRVNILSA
FT                   PCSSGEEVYSLALLATQNFIKDMYILGIDINSSVIEKAKLGKYQGRTLQRLSESEKRRF
FT                   FLESEDKFYTINKNELCTCKFELCNVFEEKFSRLGKFDIIASRNMIIYFDHESKLKLME
FT                   RFHRILNDKGRLYVGNADLIPETIYFKKIFSPRGVYYEKV"
FT   gene            complement(937571..938125)
FT                   /locus_tag="C1336_000250038"
FT                   /note="C1336_000250038 identified by Glimmer3 with a raw
FT                   score of 10.87."
FT   CDS             complement(937571..938125)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250038"
FT                   /product="protein-glutamate methylesterase CheB"
FT                   /note="C1336_000250038 identified by Glimmer3 with a raw
FT                   score of 10.87. Gene function extrapolated from
FT                   JJD26997_0890 (CP000768.1) after blastn alignment (96.76
FT                   percent identity over a 555 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30776.1"
FT                   /translation="MKLILIGSSTGGPNQLKFLLKDIDIKNTCVVIAQHMSVSFIPSFV
FT                   GQFNKEAFSEVCLLNDKEILSNKIYICPKNTILSGNLNIVASWQDVVSSFKPSVDLLFH
FT                   SAVSLAKTNKILAIILTGMGDDGAKGLFELYKTGVRCLCENEADSVVYGMPKRAKDMNP
FT                   HLKPMSLKEIKKEIINFIDQD"
FT   gene            938289..938726
FT                   /locus_tag="C1336_000250039"
FT                   /note="C1336_000250039 identified by Glimmer3 with a raw
FT                   score of 11.57."
FT   CDS             938289..938726
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250039"
FT                   /product="putative ribose 5-phosphate isomerase"
FT                   /note="C1336_000250039 identified by Glimmer3 with a raw
FT                   score of 11.57. Gene function extrapolated from C8J_0862
FT                   (CP000814.1) after blastn alignment (97.16 percent identity
FT                   over a 352 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30777.1"
FT                   /translation="MLREKIYIASDHAGFELKEKICVFLKEKNIIFNDLGTNTCASCDY
FT                   PDYAHLLAEKIDKRSFGILICGSGIGISIAANRHKNIRCALCHESLSAELARRHNDANV
FT                   LALGGRLIGIELATDIIEKFIQTPFEEGRHMQRIQKIEVKI"
FT   gene            938726..939058
FT                   /locus_tag="C1336_000250040"
FT                   /note="C1336_000250040 identified by Glimmer3 with a raw
FT                   score of 8.05."
FT   CDS             938726..939058
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250040"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250040 identified by Glimmer3 with a raw
FT                   score of 8.05. Gene function extrapolated from
FT                   JJD26997_0888 (CP000768.1) after blastn alignment (99.10
FT                   percent identity over a 333 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30778.1"
FT                   /translation="MFTNWLVLTILICATIYLIVMLFYYKTLLNKEKTSKDFIKNNLDD
FT                   TEIVIRKLQIQLQRSLGNIDILTEELNKIKADLTSLRTRNSQYRLENDKLRQRIKELEA
FT                   KIEALL"
FT   gene            939055..939603
FT                   /locus_tag="C1336_000250041"
FT                   /note="C1336_000250041 identified by Glimmer3 with a raw
FT                   score of 11.77."
FT   CDS             939055..939603
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250041"
FT                   /product="adenine phosphoribosyltransferase"
FT                   /note="C1336_000250041 identified by Glimmer3 with a raw
FT                   score of 11.77. Gene function extrapolated from
FT                   JJD26997_0887 (CP000768.1) after blastn alignment (98.54
FT                   percent identity over a 549 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30779.1"
FT                   /translation="MIKLTQEEQKYLLDSIRIIPDFPKKGIIFRDITTLLNNKEALNFL
FT                   LKHLKERYKDYNLDFIAGTESRGFIFASMICAKLNLPFVPIRKPGKLPFETFSCEYDLE
FT                   YGSDKVELHKDAFKNIQNAKVLLVDDLIATGGTAIASYELIQKAGAKCVEACFLMNLKD
FT                   LNGANKLEKLTSVYSVLEI"
FT   gene            939622..940218
FT                   /locus_tag="C1336_000250042"
FT                   /note="C1336_000250042 identified by Glimmer3 with a raw
FT                   score of 10.49."
FT   CDS             939622..940218
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250042"
FT                   /product="putative integral membrane protein (DedA family)"
FT                   /note="C1336_000250042 identified by Glimmer3 with a raw
FT                   score of 10.49. Gene function extrapolated from C8J_0865
FT                   (CP000814.1) after blastn alignment (98.41 percent identity
FT                   over a 252 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30780.1"
FT                   /translation="MEEFLKNLLYQYKDLAYIIIFLWCILEGELALILAGIFAHQGHVN
FT                   LGFVIFIAGLGGFVGDQIYFYIGRYNKRYIQKKLKTQRRKFAVAHLLLQRFGWPIIFIQ
FT                   RYMYGFRTIIPMSIGVTRYSAKKFAIINLFSAWVWASITILLAWYFGEQIWKMVTWAEE
FT                   HWYYAAIIIIAFLSLLLFGFKQMEKAILKDKRKKS"
FT   gene            940215..941666
FT                   /locus_tag="C1336_000250043"
FT                   /note="C1336_000250043 identified by Glimmer3 with a raw
FT                   score of 13.64."
FT   CDS             940215..941666
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250043"
FT                   /product="aminopeptidase"
FT                   /note="C1336_000250043 identified by Glimmer3 with a raw
FT                   score of 13.64. Gene function extrapolated from Cj0929
FT                   (AL111168.1) after blastn alignment (97.04 percent identity
FT                   over a 439 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30781.1"
FT                   /translation="MKFELNDKKLDAIKADFELIFIQDKNLKNFNKEKDFFKLNNYKGE
FT                   GVLLDLNNKKLYLELKSLAYEDIRLSLCTAYKTLEKLNIKSVKLPSIIGDCVVRSFTSL
FT                   VEGVLFGAYKFDKYKSEKKTSTLEKFIISSEELNGKKFNKDEAKIGLERGEILANATNF
FT                   TKNIVNEIPEIYTPLKMAEDAQNLAKENKNIICKIYDEKFLAKEKMNAFLAVNRASVHP
FT                   PRLIHLSYKAKNAKKRVVFVGKGLTYDSGGLSLKPADFMLTMKADKSGAAAAMGIIKAV
FT                   AELALDLEVHCILGATENMIGGNAYKPDDVLISREGVSIEVRNTDAEGRLVLADCLSFA
FT                   QDLKPDLLIDMATLTGACVVGLGEFTSAIMGNNEELQNDFYLSSKKSGEYTTILHFNPH
FT                   LRELIKSNIADISNTASSRYGGAITAGLFLDKFIRKEYKDKWLHLDIAGPAYTEKSWGY
FT                   SSFGAGGAGVRMCVNYLIQILRKAK"
FT   gene            941663..942766
FT                   /locus_tag="C1336_000250044"
FT                   /note="C1336_000250044 identified by Glimmer3 with a raw
FT                   score of 12.97."
FT   CDS             941663..942766
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250044"
FT                   /product="GTP-binding protein YchF"
FT                   /note="C1336_000250044 identified by Glimmer3 with a raw
FT                   score of 12.97. Gene function extrapolated from CJE1008
FT                   (CP000025.1) after blastn alignment (98.22 percent identity
FT                   over a 618 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30782.1"
FT                   /translation="MSLSVGIVGLPNVGKSTTFNALTKAQNAQSANYPFCTIEPNKAMV
FT                   EVPDLRLNELAKIVKPERIIHSLIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVILHI
FT                   VRCFDEENITHVEGGVNPLRDVEIINTELILADIEQLSKKIEKLTKETKANQKGAKESL
FT                   ELANSLLDHLNKGLAASSYPEKESEIYQALIKELRLLSAKEVIYGANVDENGISEDNDY
FT                   VKALKEYAKKNDHEVIKLCAKIEEELVGLSDEESREFLSSLGVNESGLDQIIRTAFTKL
FT                   GLISYFTAGVVEVRSWTIKKGWKAPKAASVIHNDFEKGFIKAEVISYEDYIQYKGENGA
FT                   KEAGKLRLEGKDYIVLDGDVMHFRFNV"
FT   gene            complement(942788..944170)
FT                   /locus_tag="C1336_000250045"
FT                   /note="C1336_000250045 identified by Glimmer3 with a raw
FT                   score of 14.46."
FT   CDS             complement(942788..944170)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250045"
FT                   /product="argininosuccinate lyase"
FT                   /note="C1336_000250045 identified by Glimmer3 with a raw
FT                   score of 14.46. Gene function extrapolated from Cj0931c
FT                   (AL111168.1) after blastn alignment (97.38 percent identity
FT                   over a 497 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30783.1"
FT                   /translation="MKNEMWSGRFSSASDELLKEFNASLNVDKTLFNEDIQGSIAHATM
FT                   LESCGILKKEELDAIIKGLEQVRSEIEQGKFIFDIKDEDIHMAIEKRLSELIGSEIGGR
FT                   LHTARSRNDQVATDFKLFVKKSHIELIKLLKELIQTMLEHAKVHKKTIMPSFTHLQHAQ
FT                   PVSFSFYILAYAFMLMRDIKRLQNSLELADFSPLGSCACAGTSYATNRELNAKILGFKD
FT                   IMPNAMDGVSDRDFALDLLYDIAVIFTHTSRLCEEMILFSSSEFSFISISDSFSTGSSI
FT                   MPQKKNPDVCELIRGKTGRVYGNLISLLTIMKALPLAYNKDMQEDKEGLFDSVKTAKDS
FT                   LIILNAMLKEIRINKENMLNACKKGHLLATDLADYLVREKNIPFRKAHFIVGNVVAQAE
FT                   IQGIDISEIKDLSKIDPIFDEKAIELLNFEISLNSKQSEGSSSTTSVEKQIQILQEFIK
FT                   KI"
FT   gene            complement(944180..945754)
FT                   /locus_tag="C1336_000250046"
FT                   /note="C1336_000250046 identified by Glimmer3 with a raw
FT                   score of 13.79."
FT   CDS             complement(944180..945754)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250046"
FT                   /product="phosphoenolpyruvate carboxykinase (ATP)"
FT                   /note="C1336_000250046 identified by Glimmer3 with a raw
FT                   score of 13.79. Gene function extrapolated from CJE1010
FT                   (CP000025.1) after blastn alignment (95.30 percent identity
FT                   over a 1575 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30784.1"
FT                   /translation="MKKFDNLGLDNIKEIFHNLSYDELNAHEKANNEGLSTDNDTFCVD
FT                   TGIFTGRSPKDKYFVKQDPSSKYIAWGKVNQPITKELFDKLLTKAKQELSGKKIYVQDA
FT                   FCGASLQSRKAVRFVTEIAWQAHFVKNMFIRPSQEELENFKADFIVYNACKCINEDYKQ
FT                   DGLNSEVFVIFNVEENIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANVGEKG
FT                   DVALFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDEGVFNFEGGCYAKTINLDPEHEPEI
FT                   YGAIKRNALLENVVLRADKSVDYADASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFL
FT                   SADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGILEPQATFSACFGEPFMPLHPT
FT                   VYARLLGEKIEKHEANVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSIAKCKFEN
FT                   FEVFDLAIPKALEGVESTLLNPINTWSDKNNYIATRDKLAHMFIQNFKRYEDVKEGIEF
FT                   SKFGPKI"
FT   gene            complement(945767..947566)
FT                   /locus_tag="C1336_000250047"
FT                   /note="C1336_000250047 identified by Glimmer3 with a raw
FT                   score of 14.80."
FT   CDS             complement(945767..947566)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250047"
FT                   /product="putative oxaloacetate decarboxylase, alpha
FT                   subunit"
FT                   /note="C1336_000250047 identified by Glimmer3 with a raw
FT                   score of 14.80. Gene function extrapolated from
FT                   JJD26997_0881 (CP000768.1) after blastn alignment (97.63
FT                   percent identity over a 253 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30785.1"
FT                   /translation="MAKKFIDVMDTSFRDGFQSVYGARVLMDDFFPAVEAAKEAGITHF
FT                   EFGGGARFQSLYFYLNEDAFTMMDKFRAIVGKDTNLQTLARGVNTVTLDTGSSELIDLH
FT                   AKLFAKHGTTTIRNFDALNDVNNLKFSGECIVKHGLKHEITITLMDLPPNCKGAHDVPF
FT                   YEKILKEILAAEIPFHSICFKDASGTSNPNKIYETIKMARKILPQDTHIRLHTHETAGV
FT                   SIACYLAALEAGVDGIDLAAAPVSGGTSQPDILTMMHALKGKDYDLGGLEEEKILKYEE
FT                   VLKDCLKEYFLPPEATMVNPLIPFSPMPGGALTANTQMMRDNNILDKFPQVIHAMREVV
FT                   EKGGFGTSVTPVSQFYFQQAFNNVMFGPWKKIAEGYGKMVLGYFGKTPVTPDANIVELA
FT                   SKQLNLEPTTELAINIADKDESKSIVYTKTLLEKESIETSEENIFIAAACKEKGIAFLK
FT                   GEAKVNVRKLASMPKPMSVDENKFTVAVNGNKYHVEVSYGFDKDVNVKSVKKVEENKNI
FT                   VSSNSTSSVDAENEVLAGISGNVFKIYVNEGEEVKSGQAIMVLEAMKMEIEVNAPKDGI
FT                   ISELCIKIGDTVNEGEVLAIYKN"
FT   gene            complement(947599..948939)
FT                   /locus_tag="C1336_000250048"
FT                   /note="C1336_000250048 identified by Glimmer3 with a raw
FT                   score of 9.02."
FT   CDS             complement(947599..948939)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250048"
FT                   /product="sodium transporter, putative"
FT                   /note="C1336_000250048 identified by Glimmer3 with a raw
FT                   score of 9.02. Gene function extrapolated from C8J_0871
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 273 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30786.1"
FT                   /translation="MRTYFSKIGFVLAVAGGAVGLGNAWKFPTLSAENGGFVFVLLYLF
FT                   FTLTIGFSIFLAEVAMGRLSKSDLANAYSNLAIKYGNRWRYGGVFMLGGIFVLSFYLVI
FT                   MGWVLKYTVVSLYYLPKTLDEAASNFQNLITANLTSSVFFFILSFFLTLLIVSKGLIKG
FT                   IEKLNVAIMPSLFLMLVFMLFYCMGFKQGFANAFSYLFYPDFSHFKFSSIAEALGLAFF
FT                   TLCLGIGCIVTYSSALDKKTNFIKSSVYIVLINLLISFIMGLIVFTFIFEFGADPHTQG
FT                   AGIVFVSLMSLFNQLGALGYIFAFCFFLALFFAGITSAVSMIEPLTFYMINNYQISRVK
FT                   ALFLIGLFVFVFGICCILSLNLNFFSMFSFFGKDFFTLLDKLTSNFLLPLGAIACSIFV
FT                   GFFMNKKQIYKIFSKFISRKIFLIWLFFIRFISPIAIILVMCYQIFV"
FT   gene            complement(948952..950286)
FT                   /locus_tag="C1336_000250049"
FT                   /note="C1336_000250049 identified by Glimmer3 with a raw
FT                   score of 12.12."
FT   CDS             complement(948952..950286)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250049"
FT                   /product="putative transmembrane transport protein"
FT                   /note="C1336_000250049 identified by Glimmer3 with a raw
FT                   score of 12.12. Gene function extrapolated from C8J_0872
FT                   (CP000814.1) after blastn alignment (99.48 percent identity
FT                   over a 386 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30787.1"
FT                   /translation="MSSKFSKIGFILAVAGSAVGLGNAWKFPTLVGQSGGSAFILLYII
FT                   LTLGVGFVIFLAELSIGKISEKDPVNAYEKLAPSNKKAWSYVGFTMVGAILIVSFYTLV
FT                   IGWIVKYVFLSITGNLPMDLEVSKAQFGFFTSEDFLSQFICFTLVFLCVFYIVSKGVKN
FT                   GIEKLNVWMMPSLFILLILMLVYAISKDGFMMAVKFLFVPDFSKINTSNVLEALGLAFF
FT                   SLSLGVGTIITYSASLPDKTNFITSTLNIIFINLLVGLLIGLVVFTFIFEFGYNPNQQG
FT                   PGLVFISLATLFEKIGVIGCIFGAAFFISLIFAGITSAVSMIEPFAFYLINTFGMSRKK
FT                   ALILIGIVVYILGMLCILSSLKSTQFGFFGMSFFDLLDSISSKVIMPLGGILAAIFVGF
FT                   VMKKEALKILFEPYMRGIFFELWYVFLRFISPLAVVIVMIAAFLK"
FT   gene            950518..950856
FT                   /locus_tag="C1336_000250050"
FT                   /note="C1336_000250050 identified by Glimmer3 with a raw
FT                   score of 13.94."
FT   CDS             950518..950856
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250050"
FT                   /product="ATP synthase F0, C subunit"
FT                   /note="C1336_000250050 identified by Glimmer3 with a raw
FT                   score of 13.94. Gene function extrapolated from
FT                   CJJ81176_0943 (CP000538.1) after blastn alignment (99.06
FT                   percent identity over a 319 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30788.1"
FT                   /translation="MKKVLFLLLACSAVAFAAETNAPVEQEAINVWIKAFSVLAAGLGL
FT                   GVAALGGAIGMGNTAAATIAGTARNPGLGPKLMTTMFIALAMIEAQVIYALVIALIALY
FT                   ANPFIVLQ"
FT   gene            950890..950975
FT                   /locus_tag="C1336_000250336"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            950890..950975
FT                   /locus_tag="C1336_000250336"
FT                   /product="tRNA-Leu"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            951175..952374
FT                   /locus_tag="C1336_000250051"
FT                   /note="C1336_000250051 identified by Glimmer3 with a raw
FT                   score of 8.29."
FT   CDS             951175..952374
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250051"
FT                   /product="putative site-specific recombinase, phage
FT                   integrase family"
FT                   /note="C1336_000250051 identified by Glimmer3 with a raw
FT                   score of 8.29. Gene function extrapolated from
FT                   JJD26997_1101 (CP000768.1) after blastn alignment (99.16
FT                   percent identity over a 238 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30789.1"
FT                   /translation="MLNDTKIKALKAKDKKYYIADFDNLLLCIYPSGKKTFIFNYKCPK
FT                   TLRYKRITLGEYPTLNLANARKQRDNLKVNLAENDSIREKYEITFKELALEKMDLKKLE
FT                   LSEKTYKSYMSYLQRFAFGIYGEIILDKLQIKDILKSFEKFRKENIREGADKFFTLLNE
FT                   IFRHGVIKEYIKSNPMANLNRKELLINKASKNHATLLETKEIKALVDNIIDYKGYISVK
FT                   IAAMFSLLTAQRSFSIRSAKWEDIDLDNGVWYIPQEDMKMKRAHTIPLNSQCVYMLKKY
FT                   KEMSINTDYLFYSLRSKSEIISDNTIRSMFRRMGYSNDDFTPHGFRAMFSTLAHENRNK
FT                   HQMSSDIIELCLAHVEKNKIKSAYNHALNLKEKAILMQWWGDYLDEIADLNQQVRNIFL
FT                   "
FT   gene            complement(952301..952540)
FT                   /locus_tag="C1336_000250052"
FT                   /note="C1336_000250052 identified by Glimmer3 with a raw
FT                   score of 5.80."
FT   CDS             complement(952301..952540)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250052"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250052 identified by Glimmer3 with a raw
FT                   score of 5.80. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30790.1"
FT                   /translation="MIRLDIGDYYTRKEVANLLKVKEPIVHKYAKQGKFREFKQHRNCS
FT                   GLYPKHDIENFIKKYFGLVDLDQQSHQDNLPTTA"
FT   gene            complement(952533..953075)
FT                   /locus_tag="C1336_000250053"
FT                   /note="C1336_000250053 identified by Glimmer3 with a raw
FT                   score of 12.60."
FT   CDS             complement(952533..953075)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250053"
FT                   /product="pentapeptide repeat family protein"
FT                   /note="C1336_000250053 identified by Glimmer3 with a raw
FT                   score of 12.60. Gene function extrapolated from CJE0546
FT                   (CP000025.1) after blastn alignment (99.26 percent identity
FT                   over a 269 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30791.1"
FT                   /translation="MGILKRLDKTIIIENDRKSEKELVEYCILEGISLNNANLENINLS
FT                   GLDFDNAFINGASFKNSNLNDISSKNASFIDCNFSGASFHFCNFLRTEFENCIFENVDL
FT                   RDCIGDMKNIFSVVVDTYVMTFTKTMMNLGCDTKTIKEWRNLSVDDLEDEEQKWLWNYY
FT                   KDTIFEIIDKRLGVEND"
FT   gene            complement(953136..953324)
FT                   /locus_tag="C1336_000250054"
FT                   /note="C1336_000250054 identified by Glimmer3 with a raw
FT                   score of 2.61."
FT   CDS             complement(953136..953324)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250054"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250054 identified by Glimmer3 with a raw
FT                   score of 2.61. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30792.1"
FT                   /translation="MKIIILENGIKLIIKVTVYKMLNIILVLLFILFFILMFFNYKYQK
FT                   AQVELLEQNKKNIRIKY"
FT   gene            complement(953266..953931)
FT                   /locus_tag="C1336_000250055"
FT                   /note="C1336_000250055 identified by Glimmer3 with a raw
FT                   score of 9.68."
FT   CDS             complement(953266..953931)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250055"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250055 identified by Glimmer3 with a raw
FT                   score of 9.68. Gene function extrapolated from
FT                   JJD26997_1104 (CP000768.1) after blastn alignment (82.94
FT                   percent identity over a 252 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30793.1"
FT                   /translation="MTEIQFNEIKEKLSKCCEERHLTYENQREEFLGNVFEKVSEYFRA
FT                   KNDLEKIDALCDIAVFFFNAFDFKFGEISNIKRAGMIHLIDHFTSYFTEHNNKTVYNNS
FT                   KDEDFEYLLIVEIEILVKNLGFGFYKCMLEKIKEIESRTGFYDERLNRFVEKIGAYCER
FT                   EAFDLAINDFKLTNVPNKYFLDKEGSDFWCIKIEDNNGDYEDYYIRKWYKADYKSYSL"
FT   gene            complement(953928..954347)
FT                   /locus_tag="C1336_000250056"
FT                   /note="C1336_000250056 identified by Glimmer3 with a raw
FT                   score of 6.30."
FT   CDS             complement(953928..954347)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250056"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250056 identified by Glimmer3 with a raw
FT                   score of 6.30. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30794.1"
FT                   /translation="MKLQNFDFRIWNNNSKTYEAGSIIESLGFITSVFNQLTYEKPTID
FT                   YEIELWTGYFDKNGNKIYEGDVIKYVYIFKHELLDKGMIKKLPKKVSIGCVGIDNFLGF
FT                   RILKNKELQCFMKDIANIEIIGNIHENADLLKEGK"
FT   gene            complement(954379..954903)
FT                   /locus_tag="C1336_000250057"
FT                   /note="C1336_000250057 identified by Glimmer3 with a raw
FT                   score of 5.62."
FT   CDS             complement(954379..954903)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250057"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250057 identified by Glimmer3 with a raw
FT                   score of 5.62. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30795.1"
FT                   /translation="MKLKDFDFRIWDGKKYLKQKIYNDNINNNEYIAVTGNVDDENYVL
FT                   TIEHSYESNYYGGDYDEYCKVKDFTSCNYEIELFTGLYDKNGNKIYENDILMNELTEEI
FT                   FYITRDDTYKMSEIILYGKDYNGNLYRKRNTGGINLLKMFVSDKNMSVVGNIHENPELL
FT                   EEGKQWKLANL"
FT   gene            complement(955024..955242)
FT                   /locus_tag="C1336_000250058"
FT                   /note="C1336_000250058 identified by Glimmer3 with a raw
FT                   score of 4.81."
FT   CDS             complement(955024..955242)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250058"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250058 identified by Glimmer3 with a raw
FT                   score of 4.81. Gene function extrapolated from
FT                   JJD26997_1106 (CP000768.1) after blastn alignment (93.15
FT                   percent identity over a 219 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30796.1"
FT                   /translation="MKILDLFKVNVYYFCSYKANKEDKIITGSCLVDYSRYFWKKTDFE
FT                   VVYHLISNQIKKDLKATGIYFTQFHKL"
FT   gene            complement(955239..955679)
FT                   /locus_tag="C1336_000250059"
FT                   /note="C1336_000250059 identified by Glimmer3 with a raw
FT                   score of 4.42."
FT   CDS             complement(955239..955679)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250059"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250059 identified by Glimmer3 with a raw
FT                   score of 4.42. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30797.1"
FT                   /translation="MKLSDFDFRIWSYNIEEYLQPKNTYLAIVKDEKGLDSYEKALDVA
FT                   DDCSGHDYPLYQYGDSADVEVELFTGFHDKNDTKIYEGDILRIQLDYNKVEKGFVQYHN
FT                   GIFKVINRKASHEYCVTFLGICYIKDCVEIIGNIHENAELLK"
FT   gene            complement(955690..956391)
FT                   /locus_tag="C1336_000250060"
FT                   /note="C1336_000250060 identified by Glimmer3 with a raw
FT                   score of 9.67."
FT   CDS             complement(955690..956391)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250060"
FT                   /product="phage anti-repressor protein, putative"
FT                   /note="C1336_000250060 identified by Glimmer3 with a raw
FT                   score of 9.67. Gene function extrapolated from CJE0548
FT                   (CP000025.1) after blastn alignment (92.54 percent identity
FT                   over a 228 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30798.1"
FT                   /translation="MNDLVYSLNGGLVTDQNKISTISKVDINSIQRLIRNYKQDLECFG
FT                   ELGFELQKIAKTNKKIYFLNEQQATLLLTYMKNSESVRNAKKVLVFAFYQMKEKLRSLE
FT                   QEREKARFKTLSDENLRLNSLNHHQKIGYKSQLAQQKEHYENKIKALKYDLENKNKLSF
FT                   KRKLSQKELLELRKILAKDYGILCIKEWEMSLFAEKIGKNLVFEAVLNKLEKELNYWKN
FT                   YEKCEEKWKKY"
FT   gene            complement(956522..956683)
FT                   /locus_tag="C1336_000250061"
FT                   /note="C1336_000250061 identified by Glimmer3 with a raw
FT                   score of 9.82."
FT   CDS             complement(956522..956683)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250061"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250061 identified by Glimmer3 with a raw
FT                   score of 9.82. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30799.1"
FT                   /translation="MAEEKESKGSYNLQIKIPNELKDKLEKKAEKAGVSLNQYIMYLFI
FT                   DDIKNERI"
FT   gene            complement(956697..956966)
FT                   /locus_tag="C1336_000250062"
FT                   /note="C1336_000250062 identified by Glimmer3 with a raw
FT                   score of 5.93."
FT   CDS             complement(956697..956966)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250062"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250062 identified by Glimmer3 with a raw
FT                   score of 5.93. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30800.1"
FT                   /translation="MNKTLQEIEEEIKDYENENNRLIEENNKLKQEIEIYEEENDKLYF
FT                   EALDRERELLKKKNKYVFFIKNNYDRIYMWLIIIALAFIIYKFI"
FT   gene            complement(956959..957282)
FT                   /locus_tag="C1336_000250063"
FT                   /note="C1336_000250063 identified by Glimmer3 with a raw
FT                   score of 2.86."
FT   CDS             complement(956959..957282)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250063"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250063 identified by Glimmer3 with a raw
FT                   score of 2.86. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30801.1"
FT                   /translation="MIEVIIAILLFLILLAILGYKREADSLLGCLLMIPIGIISFLFEI
FT                   LLHLLLSPIYIIAFFMPSKEKKALSKLEIIKKENEELRKENEELLNKRDLLLKKINKRH
FT                   KYE"
FT   gene            complement(957333..958172)
FT                   /locus_tag="C1336_000250064"
FT                   /note="C1336_000250064 identified by Glimmer3 with a raw
FT                   score of 7.86."
FT   CDS             complement(957333..958172)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250064"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250064 identified by Glimmer3 with a raw
FT                   score of 7.86. Gene function extrapolated from
FT                   JJD26997_0310 (CP000768.1) after blastn alignment (97.89
FT                   percent identity over a 285 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30802.1"
FT                   /translation="MSEQTYELRFEYFNEENATLFFQKITDFLLSIDKLNNSLVSVFGI
FT                   EIDINIQIKSIEKGSIRIWIAEKLNKISDDDIKHYISNPRELLADLLIKSKKMILEKIQ
FT                   DKKCQDIPKEYKNIIEKSDLKDFGYNNNETNLLTCVSDLTHKAKEFKHKPMIIFEEKVY
FT                   GISETFDYNPKTADGVKEQISKMQGAFIIKKPDLTGESKWEIINDKVIKVKINDENFKN
FT                   KLKDRSIKLSYGDKIKGVLISKTYISKDLEVLENEYFLEDIKGIIEPSYTQEKSLFK"
FT   gene            complement(958227..958979)
FT                   /locus_tag="C1336_000250065"
FT                   /note="C1336_000250065 identified by Glimmer3 with a raw
FT                   score of 11.04."
FT   CDS             complement(958227..958979)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250065"
FT                   /product="site-specific DNA-methyltransferase"
FT                   /note="C1336_000250065 identified by Glimmer3 with a raw
FT                   score of 11.04. Gene function extrapolated from CJE1421
FT                   (CP000025.1) after blastn alignment (97.70 percent identity
FT                   over a 738 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30803.1"
FT                   /translation="MKPNLYNDHFQNFKRYNIPKAQLVIADIPYNLGNNAYASSPEWYI
FT                   NGDNKNGESKKANKAFFDTDNDFRVSEFMHFCSKMLIKEPKECGKSPCMIVFCSFEQQA
FT                   MLIEVAKKYGFNHYINLVFRKQSSSKVLKANMKIVGNCEYALILYREKLPKFNNDGKMI
FT                   YNCMDWQKDEGIPKVHPTQKPIKLLERLISIFTDAGDVVIDPCAGSGSTLLAATNLNRK
FT                   AYGFEIKKDFFKSANEIMFKHIERSLFD"
FT   gene            complement(958960..959238)
FT                   /locus_tag="C1336_000250066"
FT                   /note="C1336_000250066 identified by Glimmer3 with a raw
FT                   score of 5.76."
FT   CDS             complement(958960..959238)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250066"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250066 identified by Glimmer3 with a raw
FT                   score of 5.76. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30804.1"
FT                   /translation="MKVCRSNYLEIVKIIPFSERRSCFCHFLRSNGFAIEKINGKNHIR
FT                   KEDLEKAFLIYKSKPHRKNFFNEEKLIVKAFEDVLKFLRGKNETKFI"
FT   gene            complement(959219..959914)
FT                   /locus_tag="C1336_000250067"
FT                   /note="C1336_000250067 identified by Glimmer3 with a raw
FT                   score of 13.49."
FT   CDS             complement(959219..959914)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250067"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250067 identified by Glimmer3 with a raw
FT                   score of 13.49. Gene function extrapolated from CJE0554
FT                   (CP000025.1) after blastn alignment (99.30 percent identity
FT                   over a 143 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30805.1"
FT                   /translation="MLPAFKASFEVANYSPSVEYLSEGGLYSGVFRKAFLYDKLASDGS
FT                   NNTFICFEFLIRKEQKLAIFNLFVAKNNDFSYINKNGEKENYLGFRQLNAIMKFFGIDE
FT                   LDFSVKGNENVFGVQTEVIYLNSLVNKLLVLGFGTEEYLSKNGELANKIFLDRIFNEKM
FT                   QNMDEFQNNKEPLSIKSFKARHKPLNNDNNKSFIPKENQSYNPYGNEVKNNNNEKYIEI
FT                   GDDDESLPF"
FT   gene            complement(959914..960651)
FT                   /locus_tag="C1336_000250068"
FT                   /note="C1336_000250068 identified by Glimmer3 with a raw
FT                   score of 14.72."
FT   CDS             complement(959914..960651)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250068"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250068 identified by Glimmer3 with a raw
FT                   score of 14.72. Gene function extrapolated from CJE0555
FT                   (CP000025.1) after blastn alignment (98.37 percent identity
FT                   over a 738 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30806.1"
FT                   /translation="MSNEVVLKEENKLEINFNPYELALVKGDLSKLSDVERASYVKNLC
FT                   ESLGLNMLTKPFEYIVLNGKLTLYANKSATDQLRQIRKVSITKTEVAQVGDIYMVTAYA
FT                   ATPDGRTDCDTGALNIKNLGGDNLANAIMKAITKAKRRVTLSICGLGMLDESELETIKE
FT                   KRFLNPNEDLKVWGSDEKIALENKAKEIKALGAELRKFMSDNGLNTQEQNSFIKKHSLF
FT                   TSEKIQEVLSNKDEFLTQLKGEL"
FT   gene            complement(960653..961507)
FT                   /locus_tag="C1336_000250069"
FT                   /note="C1336_000250069 identified by Glimmer3 with a raw
FT                   score of 13.27."
FT   CDS             complement(960653..961507)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250069"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250069 identified by Glimmer3 with a raw
FT                   score of 13.27. Gene function extrapolated from CJE0556
FT                   (CP000025.1) after blastn alignment (98.40 percent identity
FT                   over a 814 bp alignment) - for clarity, the original
FT                   product name 'conserved domain protein' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30807.1"
FT                   /translation="MQYKIIDLEQGSPEWLDFRKGKIGASMVASCVGIKGAFNSKEEAR
FT                   DIILGLKEVYQNEAMKKGNNYEALIRARVEFLHSVSITPVVLQSLENEMFIASLDGMDE
FT                   NGVIYEFKYSQDEYDFIKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVECEV
FT                   SKDEAYQEWLVKNIKQFILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLE
FT                   SLKKELIALANGEKARCLDITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIK
FT                   KGA"
FT   gene            complement(961497..962240)
FT                   /locus_tag="C1336_000250070"
FT                   /note="C1336_000250070 identified by Glimmer3 with a raw
FT                   score of 12.00."
FT   CDS             complement(961497..962240)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250070"
FT                   /product="DNA-binding protein Roi"
FT                   /note="C1336_000250070 identified by Glimmer3 with a raw
FT                   score of 12.00. Gene function extrapolated from
FT                   JJD26997_1112 (CP000768.1) after blastn alignment (95.16
FT                   percent identity over a 186 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30808.1"
FT                   /translation="MNLELFKKDENKEISLTSLEIAELTGKEHFNVIRDIETYLEKVVE
FT                   GGVFKFEDTYQNPQNKQFYKCYRLPKREVLILVSGYSVELRAKIIDRLEYLENELKKQS
FT                   YKPLSLKESLQMQLELLERNEKLQIENVNLKNEAKENAPLIHFANRIKDTNDAILIRDF
FT                   AKILYEKNKIEIGEKRLFAFLRDNGFLMSDNKPYQKCIEQGLFKVSETTISTINGDRLV
FT                   STTKITGKGQIKIANLLLEGINHAV"
FT   gene            complement(962237..962419)
FT                   /locus_tag="C1336_000250071"
FT                   /note="C1336_000250071 identified by Glimmer3 with a raw
FT                   score of 10.51."
FT   CDS             complement(962237..962419)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250071"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250071 identified by Glimmer3 with a raw
FT                   score of 10.51. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30809.1"
FT                   /translation="MSQEEKFLECLAKATKGKKDLSNFEVLEFAFSIFCCLDNYIQNNK
FT                   ARDKKILKLLKGDEK"
FT   gene            962565..962774
FT                   /locus_tag="C1336_000250072"
FT                   /note="C1336_000250072 identified by Glimmer3 with a raw
FT                   score of 6.68."
FT   CDS             962565..962774
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250072"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250072 identified by Glimmer3 with a raw
FT                   score of 6.68. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30810.1"
FT                   /translation="MEENQKNNKSEIISVRLDTLTKEKLAFICELEYRPMALQIRKIIE
FT                   DYIKDYERKFNLTNREDYPGYFPW"
FT   gene            complement(962750..962908)
FT                   /locus_tag="C1336_000250073"
FT                   /note="C1336_000250073 identified by Glimmer3 with a raw
FT                   score of 12.62."
FT   CDS             complement(962750..962908)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250073"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250073 identified by Glimmer3 with a raw
FT                   score of 12.62. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30811.1"
FT                   /translation="MKKQTKPLSIRIPLELKEELQKIADKEYRPLATQIVKILSDYVKN
FT                   YQGKYPG"
FT   gene            complement(962905..963159)
FT                   /locus_tag="C1336_000250074"
FT                   /note="C1336_000250074 identified by Glimmer3 with a raw
FT                   score of 12.60."
FT   CDS             complement(962905..963159)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250074"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250074 identified by Glimmer3 with a raw
FT                   score of 12.60. Gene function extrapolated from CJE0558
FT                   (CP000025.1) after blastn alignment (98.17 percent identity
FT                   over a 164 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30812.1"
FT                   /translation="MFLNSKKNEKIRYLEKEVQRLKSIIALKDTAINEISLKLEEEIEI
FT                   NVKLSNFRIKILDALGLIGVFKNDDKAIKEVKRLKDKEL"
FT   gene            complement(963150..963455)
FT                   /locus_tag="C1336_000250075"
FT                   /note="C1336_000250075 identified by Glimmer3 with a raw
FT                   score of 10.03."
FT   CDS             complement(963150..963455)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250075"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250075 identified by Glimmer3 with a raw
FT                   score of 10.03. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30813.1"
FT                   /translation="MSLLSINLKGEKMKAYHTKEQVIIKLSKDEYRKEMKLNKSLKDEN
FT                   KSLKTEISNLENEKIELLKELKDQIEANMKNIKEISSLQNKIYELLYIKERSKLCS"
FT   gene            963662..963823
FT                   /locus_tag="C1336_000250076"
FT                   /note="C1336_000250076 identified by Glimmer3 with a raw
FT                   score of 0.99."
FT   CDS             963662..963823
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250076"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250076 identified by Glimmer3 with a raw
FT                   score of 0.99. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30814.1"
FT                   /translation="MDNLLTLPLYRTINAIVKLNFQAVKSLRKPFFKGLVKLLKKLFAV
FT                   FFEFSNSI"
FT   gene            complement(963776..964048)
FT                   /locus_tag="C1336_000250077"
FT                   /note="C1336_000250077 identified by Glimmer3 with a raw
FT                   score of 14.82."
FT   CDS             complement(963776..964048)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250077"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250077 identified by Glimmer3 with a raw
FT                   score of 14.82. Gene function extrapolated from CJE0561
FT                   (CP000025.1) after blastn alignment (95.20 percent identity
FT                   over a 271 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30815.1"
FT                   /translation="MSFTDFYFDREEKRIYNQTKELIANEFESKENLENIFANLQDFKN
FT                   SLEISLEDDEEIAISLQAYGDEFIRNAYELLDRVRKFEKHCKKLF"
FT   gene            964192..964923
FT                   /locus_tag="C1336_000250078"
FT                   /note="C1336_000250078 identified by Glimmer3 with a raw
FT                   score of 5.24."
FT   CDS             964192..964923
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250078"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250078 identified by Glimmer3 with a raw
FT                   score of 5.24. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30816.1"
FT                   /translation="MLKRLMAVLFFLSLVVFISILMIKDDKYSKIQYEREKFIYEDFEK
FT                   YTQELKSNYYILTNKIPQIIGDLIEGETKHLLLAGNNIVELKSKNDYMENFERTWDRLN
FT                   LWWRYDKVEAFFEACFATFIYLIALTVLQFILIKTTNPFHLIFEFKKMFIVSILVYSIL
FT                   IGYGLVTYVNAEYVTLKPVSDNLELGYVPSNFIEVSDLEIFIKYVLFFSPFVLSLFFSI
FT                   WLYKYKKPKKSLKTFLENWKD"
FT   gene            complement(964977..965633)
FT                   /locus_tag="C1336_000250079"
FT                   /note="C1336_000250079 identified by Glimmer3 with a raw
FT                   score of 10.09."
FT   CDS             complement(964977..965633)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250079"
FT                   /product="DNA/RNA non-specific endonuclease"
FT                   /note="C1336_000250079 identified by Glimmer3 with a raw
FT                   score of 10.09. Gene function extrapolated from
FT                   JJD26997_1123 (CP000768.1) after blastn alignment (95.95
FT                   percent identity over a 148 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30817.1"
FT                   /translation="MLKKIFLLALFTSLSFAKYTQYKPSEDFAKYFTKQNCSQVLDKFY
FT                   YLNCYDYNYKGTKAVAYKLEADNLKGEQIKKRPRFEDDTNIPKKYRTTWSDYKNSGYDR
FT                   GHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQVALKLGEIEVLNL
FT                   INYDNNPQRIRNQIAIPSSYTKILKGENFKECYQVPNHEVEDESIKKYKVNCGKF"
FT   gene            complement(965678..966970)
FT                   /locus_tag="C1336_000250080"
FT                   /note="C1336_000250080 identified by Glimmer3 with a raw
FT                   score of 4.55."
FT   CDS             complement(965678..966970)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250080"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250080 identified by Glimmer3 with a raw
FT                   score of 4.55. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30818.1"
FT                   /translation="MKHQDLTSKLKNYLKHEQNNNYIIYGKKKIGKTYFIKDFIKINEY
FT                   QENSYINSLISTFEEIKKNIIEDQTNIIVIDELNKISKNKLKKILNLVNVYQDKKNFLL
FT                   ISTKKGKEVISKKIYKYKEIYLNYYFLKDTIEKISSEKNIVDIPGILSIVGIVGIVKYK
FT                   NLNEFFEFLYHISCIKKELNKIDLNLRKDVLKQFFYSMKYHIFHKQERKVKINIAEVYF
FT                   KYGVEAFTDIFNHFYEKKIINNRLFAYEYYIESDFFNRNSNDIILFLDPDTCKILIKNN
FT                   IITRELFIQTIKNTIQKIEKNEKLLCIYFDIYIDILNNFDYLDNNNEDITTIFNIFLNI
FT                   LIQTNTSKIIKLDEHRIKKIKEKFLIDFLKNKNKQYFFNDMVLNKYTQSSSLKDDKIIK
FT                   ALKAIGHIKEKAEKTKLFFSDKHPKLNEIIF"
FT   gene            complement(967066..967800)
FT                   /locus_tag="C1336_000250081"
FT                   /note="C1336_000250081 identified by Glimmer3 with a raw
FT                   score of 10.69."
FT   CDS             complement(967066..967800)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250081"
FT                   /product="phage repressor protein, putative"
FT                   /note="C1336_000250081 identified by Glimmer3 with a raw
FT                   score of 10.69. Gene function extrapolated from CJE0569
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 99 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30819.1"
FT                   /translation="MGRNGDIFDFHFDTEKFKFYLKNRDKKVTYQDLMEILYKNGIESS
FT                   EATIKKWLMSKEDNKTKPKPQYIKILCNALDIPFNEVILQDVFRNDNQINFRYFPDIYA
FT                   SAGLGTSSQSEEVKIVSVDENFLKEILDIPIKKSYDIIKINGDSMEPILSNGDFIIIDR
FT                   SKNSLETISNADIVIFRKNDDLFCKKIKKEPFENYIFLVSENKKYEDKKVDNSEFEQCE
FT                   ILGAVVSKMAVETFKNFIEVVG"
FT   gene            967912..968130
FT                   /locus_tag="C1336_000250082"
FT                   /note="C1336_000250082 identified by Glimmer3 with a raw
FT                   score of 0.72."
FT   CDS             967912..968130
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250082"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250082 identified by Glimmer3 with a raw
FT                   score of 0.72. Gene function extrapolated from
FT                   JJD26997_0317 (CP000768.1) after blastn alignment (97.47
FT                   percent identity over a 198 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30820.1"
FT                   /translation="MKKIDFFDFTKILSNHYTVISVKKIRTNKSRPSFKKQIEFKKLYG
FT                   IPHEFWVDVRSNLINIPKRGRKRKDRE"
FT   gene            968236..968535
FT                   /locus_tag="C1336_000250083"
FT                   /note="C1336_000250083 identified by Glimmer3 with a raw
FT                   score of 0.83."
FT   CDS             968236..968535
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250083"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250083 identified by Glimmer3 with a raw
FT                   score of 0.83. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30821.1"
FT                   /translation="MQYDFNLEHLFSCKKWQEVLKCLPFLKCIVMGVSRKFIASHFVLK
FT                   IEYFIKLQIAKPTRIPQTNPNNNGITFSLFSRKLKNISIIKNLFNLNYNIKESW"
FT   gene            968532..969533
FT                   /locus_tag="C1336_000250084"
FT                   /note="C1336_000250084 identified by Glimmer3 with a raw
FT                   score of 10.18."
FT   CDS             968532..969533
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250084"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250084 identified by Glimmer3 with a raw
FT                   score of 10.18. Gene function extrapolated from CJE0573
FT                   (CP000025.1) after blastn alignment (99.00 percent identity
FT                   over a 401 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30822.1"
FT                   /translation="MIPNFIASFDVALGRKSLRERKGYLKLSNTIAYGGLSVDALALYI
FT                   QLAKLSEKTIVSEIYLREFIKVKNNQRISLNRLRIAKKELIELRLLEIKKVRNGSLNFY
FT                   EWILKDENYQVKKHFNKSLSLLKNSDEKLSKTLKNNTLSIDRKLTTENEKKENLHYIET
FT                   RTHAHDNKFINNININNNKFIKKENLENLKNNQEKKERVSNQNASFVTSFIDFSKKELE
FT                   KMAKKEFKVPNANELMRQIIAFNEKNGTNFGEELANDFIGYWDAREWKRNGKRMSSVAG
FT                   SLYTWLKYAKENEARKNQRFNRKKEANPSVVDSLMEYYGMKDENKNKLLGCF"
FT   gene            969544..970194
FT                   /locus_tag="C1336_000250085"
FT                   /note="C1336_000250085 identified by Glimmer3 with a raw
FT                   score of 7.93."
FT   CDS             969544..970194
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250085"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250085 identified by Glimmer3 with a raw
FT                   score of 7.93. Gene function extrapolated from CJE0574
FT                   (CP000025.1) after blastn alignment (95.63 percent identity
FT                   over a 229 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30823.1"
FT                   /translation="MQEKIQILMDLLEINKAQATDIVGRYLQDAKDIHAFLDFYFETLE
FT                   RENIVGTTYEKLRRVCKRAEIEFKKRFEDKEIFLEWLKNKYKNSPFFRLLESDFKYSYV
FT                   CYDGQGNLFKRLAKSINMLVCLNNFGELTYEDGEMLKNNEFKHALIDFIFKNQERIGKD
FT                   IYINTSYKIKGYTSLSHEEEYNNFKKVQKKFFKENQEEFQKKVKVKMAFKNIS"
FT   gene            970212..970592
FT                   /locus_tag="C1336_000250086"
FT                   /note="C1336_000250086 identified by Glimmer3 with a raw
FT                   score of 10.02."
FT   CDS             970212..970592
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250086"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250086 identified by Glimmer3 with a raw
FT                   score of 10.02. Gene function extrapolated from CJE0575
FT                   (CP000025.1) after blastn alignment (98.94 percent identity
FT                   over a 379 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30824.1"
FT                   /translation="MEKYILKIDLKSNPVPYKRTTQRSKFACKDYLKYLDFKKLLQMEF
FT                   RRQNNISCFQAFDKQKKYEFSLKIGFNSKRHGDGDNIVKCVLDALFENDKNVLKGDYEI
FT                   ISFKKSFLNLEIKEFDFKEGVA"
FT   gene            970592..970978
FT                   /locus_tag="C1336_000250087"
FT                   /note="C1336_000250087 identified by Glimmer3 with a raw
FT                   score of 11.80."
FT   CDS             970592..970978
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250087"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250087 identified by Glimmer3 with a raw
FT                   score of 11.80. Gene function extrapolated from CJE0576
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 387 bp alignment) - for clarity, the
FT                   original product name 'conserved domain protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30825.1"
FT                   /translation="MARMMTNGKSMTKEELVSKIESYFNERVVLKETKESIIFAPKTKV
FT                   GLAVYLGITIQTLGEWEKDKDFGEIVSQAKQKCEMDILNHSLIGTYTPSVSMFLLKNQH
FT                   GYVDKQEVVSDNVQKIEIIRSEIK"
FT   gene            970975..972267
FT                   /locus_tag="C1336_000250088"
FT                   /note="C1336_000250088 identified by Glimmer3 with a raw
FT                   score of 11.83."
FT   CDS             970975..972267
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250088"
FT                   /product="terminase B protein, putative"
FT                   /note="C1336_000250088 identified by Glimmer3 with a raw
FT                   score of 11.83. Gene function extrapolated from CJE0577
FT                   (CP000025.1) after blastn alignment (96.67 percent identity
FT                   over a 1293 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30826.1"
FT                   /translation="MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVIE
FT                   NLLLGQNVLWVDTIQANLQNYYELYFTPELKNLPKDFYSWSVQDKKLIINGAVLHMRSA
FT                   ERSENIEGFGYDLVILNEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKGKNL
FT                   FYELCRKELSDKNWKHFQFSSYDNPFLKEEQIKELIEEVGGEDSEVVKQEIYGEFIDSS
FT                   SAELFALTEIENAMSKNSFSIEKMQGENIWGLDVARYGDDKSVLAKRKGFIVDEIKKYS
FT                   QLGTMELANRILAEYNQSEDKPKGIFIDTCGLGVGVYDVLLNYGLPVFEANSANSATSN
FT                   EYLNKRAQMYFTFAKNLKHMELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQLKKNYGK
FT                   SPDVSDAVALTFFEKLYSRNNTNEDWSYDGW"
FT   gene            972257..972529
FT                   /locus_tag="C1336_000250089"
FT                   /note="C1336_000250089 identified by Glimmer3 with a raw
FT                   score of 10.31."
FT   CDS             972257..972529
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250089"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250089 identified by Glimmer3 with a raw
FT                   score of 10.31. Gene function extrapolated from CJE0578
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 70 bp alignment) - for clarity, the
FT                   original product name 'conserved domain protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30827.1"
FT                   /translation="MAGEFLMIYDAIDVNKIKKLSNLSDEAIKSSLANEFLELVSGFNN
FT                   ISKKKFKREFAEFLFEKGVNEKDILKITNLSKTTIWRIMNENKKN"
FT   gene            972510..974048
FT                   /locus_tag="C1336_000250090"
FT                   /note="C1336_000250090 identified by Glimmer3 with a raw
FT                   score of 10.63."
FT   CDS             972510..974048
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250090"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250090 identified by Glimmer3 with a raw
FT                   score of 10.63. Gene function extrapolated from CJE0579
FT                   (CP000025.1) after blastn alignment (98.22 percent identity
FT                   over a 1351 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30828.1"
FT                   /translation="MKTKRTNDKRVSFLTQLISESKSGYENYKPHFKELQDAYLLENKV
FT                   MQKLRKRNKSSIYIPKINAKVKYLITSLNDVYFNSERMADIETYINSDDTIIELWQNAI
FT                   DFYSGKINMFKIFQPLFLDVLLVGTSIAKVTWHKGMPRIERVDIDSIFFDPNALNSEDV
FT                   GYIVNEIYLTYNQIHERQNLGFYKNIEIQKLFDEDDEYKKVKLYDIYERKNDDEWVVST
FT                   LFENNLLRNKVTLQDGQPFVWGSMLPQLKKIDNENYVSAYGEPIMASAMPLQDEINITR
FT                   NLLIDAVRTHIMPKIMMPKSMGVSREDIETLGKPIYTDDPKGVQILPPPNVNSAGMNLQ
FT                   LLESELTEVTGVSPQNNGAQTAQNETATEISIKAQEGGRRSADYIRQYNETFIEPLFDR
FT                   FAMLVFKYGEDNFFNGFQREDIPSFRFKIQTGTGAMNKEIRRAGIQASMQVFSQLYQMY
FT                   MSIGDANSAYGIINASKELTKELLPILGVKNVNSLFAFENNEDINPQMQGETNA"
FT   gene            974041..974244
FT                   /locus_tag="C1336_000250091"
FT                   /note="C1336_000250091 identified by Glimmer3 with a raw
FT                   score of 13.01."
FT   CDS             974041..974244
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250091"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250091 identified by Glimmer3 with a raw
FT                   score of 13.01. Gene function extrapolated from CJE0580
FT                   (CP000025.1) after blastn alignment (97.06 percent identity
FT                   over a 204 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30829.1"
FT                   /translation="MLNIEIKSDISKSKGGKKLIDFIKAKYSECFYIAKNNDEKELRLK
FT                   ALDTMAFLDVIINKIKDEEYGK"
FT   gene            974234..974881
FT                   /locus_tag="C1336_000250092"
FT                   /note="C1336_000250092 identified by Glimmer3 with a raw
FT                   score of 17.48."
FT   CDS             974234..974881
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250092"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250092 identified by Glimmer3 with a raw
FT                   score of 17.48. Gene function extrapolated from CJE0581
FT                   (CP000025.1) after blastn alignment (99.04 percent identity
FT                   over a 417 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30830.1"
FT                   /translation="MENDALKDLINVITDDDKGQVANNGDEPTQVVDNEPMQVANENEP
FT                   DYKAMYEAYKSENDNKLNALMSELEALKNPKKEPSEQELQREQYLKELGLDGLDEKLKR
FT                   LEELDKKQKDKEEQDALIAKYAQVESELRKAYPDADLKAMAELATKLNGLGEGNIDSWK
FT                   TLLNLVGKSNNAKKAEDLSSANNNVRTSDFNDKLKKGEVSEIDLGKELLSLV"
FT   gene            974892..975272
FT                   /locus_tag="C1336_000250093"
FT                   /note="C1336_000250093 identified by Glimmer3 with a raw
FT                   score of 12.34."
FT   CDS             974892..975272
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250093"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250093 identified by Glimmer3 with a raw
FT                   score of 12.34. Gene function extrapolated from CJE0582
FT                   (CP000025.1) after blastn alignment (97.11 percent identity
FT                   over a 381 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30831.1"
FT                   /translation="MDFITALKGGTGLGSSFADTLMKTSNFTPNLASSSSGFLNGLKNS
FT                   FSNFGDWLFKSSDANKVTNFDRLGNVLGGAGALYGAYNQQKMAQKNYELQKDAYNFNKY
FT                   LANEELNRRKNMENKLQNVWSN"
FT   gene            975537..976751
FT                   /locus_tag="C1336_000250094"
FT                   /note="C1336_000250094 identified by Glimmer3 with a raw
FT                   score of 12.51."
FT   CDS             975537..976751
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250094"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250094 identified by Glimmer3 with a raw
FT                   score of 12.51. Gene function extrapolated from CJE0583
FT                   (CP000025.1) after blastn alignment (97.75 percent identity
FT                   over a 356 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30832.1"
FT                   /translation="MAFYNPQRVVFNPDTGVIQNAGKVGGVLYDIMSKSFDDKVKANEF
FT                   QQEQDLRKQQMEFNQAMQNNQLLQNERNFDYQKERANIADQQWQMNYNQRARQYAMQNA
FT                   LRQQAINANKAYKDLNYQKGLLELQKLQNEINAKQKEQDLLNGVFSNSQGFNSQNNANL
FT                   QNNTRYKADAQFLDLASNQGKTYDTTHGFWNGAIERVFGGWGSQSTDLNEASDLFLKRK
FT                   LSDLLRGGKNAKWNLENIQANFPINSYFLEANNQKVAKDLTGEWLAYMPIAYKMELMEK
FT                   LENAKTSIAIKDAIEDYKKDMEYYDNYAPKMKAFYWDEKYSKPSKNAVIIDNSTSNQNI
FT                   QNDLAKNTLEVQNQNTPKLHSVSFNGINAQISEPDANGNVILVNQAGRKMQVSVEELKK
FT                   QGLIQ"
FT   gene            976748..979945
FT                   /locus_tag="C1336_000250095"
FT                   /note="C1336_000250095 identified by Glimmer3 with a raw
FT                   score of 11.26."
FT   CDS             976748..979945
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250095"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250095 identified by Glimmer3 with a raw
FT                   score of 11.26. Gene function extrapolated from CJE0584
FT                   (CP000025.1) after blastn alignment (99.07 percent identity
FT                   over a 108 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30833.1"
FT                   /translation="MNIREFLLEKPQENNIISFLQDGASQSENQNTNEYLASLKNEVIN
FT                   DFYKNKDKYAKEYEKYNFKDQNLTNPMGNISEYKRDLYDYNKNPSMNADDLSNYILDKQ
FT                   SKFNASKPIFTDDNEVARKNNQFMRDLGDELQKSGRGRLLQDDDGSYWVQDNNGNYSKV
FT                   QGSTMGDLYRGLRDNGASMALGTAGAIGGTMLGGGVGMVAGGALGASLGAGYDYYGNTK
FT                   DTNQDMNLKEALMLMGENAGLSLIGDAAFAGVAKGARALKNTYNMAKTGAQAGKDMIDG
FT                   MAVKGGNLGNRVIDKISKTDIPVVGKFTDGGLQNAETIFNNLTKNVENKKQIDELIAKE
FT                   NPTYLENGKPTIEILKNIVEQGLNKNNPQFIQDSAKRTSAILKNISNSLQGMPTTQRRE
FT                   VLLKAAQAYPEIGSFLDDVLKADKDASISFLNMIKGQDEVFKNKTGLNGEFDYKAWQKD
FT                   NHAYENRINQEYGSAISKLDELNNGKIVLTSEDLAKLENFKNNNFLDQDVKNNIQGYLD
FT                   EIKGKEVSAEQIFGLRTAINKQLNTGNKTYNTKQAYRIAKEILDDALIRNASDKVLAKE
FT                   ILDNANKNFALKENFKESYLGMMKPQETKEGLADRLVKGLRNINEDKNLENAFKGMNEQ
FT                   ERLANETHVMNALLEKHRIEGVGYDFKSLAKDLEDVEFSSKKIKDAKDVINTYALIYNN
FT                   NRDLIMTALASSGRKTNSSMATTIQGVFDRILISGIFARLHALAPFFKSAKEQALRNQI
FT                   LDALKLAKTNKEVISNLKNIKIADQEQSRIFKDALDNYIKVDKEQNKILKDALIKEGVI
FT                   KGDNFFMDKADPSKAKSDYTAKFNVEKWINNVSGILKDEWVVNLKAMAKKHPEMFKNEA
FT                   DVFKVIKEIKDNPTHFFKNYDDEVALIAKPLKDDKVGNIAIKKDSGKIIHINKTKGKDL
FT                   ERLNRRNKAMLTGTPTPATTKGSTTNVEGDLLQHSFKNSTQAKPKKNLMDDIKENIKAK
FT                   EVKKKNKKSVKQRLDEKIQNDKKARKQRIEKIKQVIARKQKIDKVRDKKNNREIAGKIG
FT                   TYTLKNLIKLKERSEDK"
FT   gene            complement(979957..980238)
FT                   /locus_tag="C1336_000250096"
FT                   /note="C1336_000250096 identified by Glimmer3 with a raw
FT                   score of 10.18."
FT   CDS             complement(979957..980238)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250096"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250096 identified by Glimmer3 with a raw
FT                   score of 10.18. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30834.1"
FT                   /translation="MEKQTDHIINIEKKLIEEDSKNQEAIRNLAPQQIKYVKKGQLFAF
FT                   IIVIIGFIFSAFLAYLDYPWLSLAGIVTSIGVISSQFLGQKRDKNQGL"
FT   gene            complement(980342..980527)
FT                   /locus_tag="C1336_000250097"
FT                   /note="C1336_000250097 identified by Glimmer3 with a raw
FT                   score of 9.36."
FT   CDS             complement(980342..980527)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250097"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250097 identified by Glimmer3 with a raw
FT                   score of 9.36. Gene function extrapolated from
FT                   JJD26997_0334 (CP000768.1) after blastn alignment (96.24
FT                   percent identity over a 186 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30835.1"
FT                   /translation="MSNINAFLFGFTNMFNADILKATSLKDRKTMITDFYKKSEELRKH
FT                   SNEEYNAKFEKITKQK"
FT   gene            complement(980692..980901)
FT                   /locus_tag="C1336_000250098"
FT                   /note="C1336_000250098 identified by Glimmer3 with a raw
FT                   score of 12.64."
FT   CDS             complement(980692..980901)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250098"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250098 identified by Glimmer3 with a raw
FT                   score of 12.64. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30836.1"
FT                   /translation="MDIETFEKKLNELELTKKEFANMVGAVYNGVINWNAKGETPKWVD
FT                   SWLINYEKAKVLDEISKSIKPFIK"
FT   gene            complement(980911..981123)
FT                   /locus_tag="C1336_000250099"
FT                   /note="C1336_000250099 identified by Glimmer3 with a raw
FT                   score of 7.60."
FT   CDS             complement(980911..981123)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250099"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250099 identified by Glimmer3 with a raw
FT                   score of 7.60. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30837.1"
FT                   /translation="MDNNEFEKLLTKANLGKKEFSQISNTPYQTIMNWKRIDSVPDWTK
FT                   PFLENHLKVKSYEQIKEIVFKIEKP"
FT   gene            981267..981944
FT                   /locus_tag="C1336_000250100"
FT                   /note="C1336_000250100 identified by Glimmer3 with a raw
FT                   score of 12.66."
FT   CDS             981267..981944
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250100"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250100 identified by Glimmer3 with a raw
FT                   score of 12.66. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30838.1"
FT                   /translation="MTDLVVINGQNVSFEAVGDQTYTTSLSISSVFKKEHKNILAKIDE
FT                   LPQDEFRELNFKLTERTAKFGAVIRSEPYYKITRDGFSLLVMGFTGEKAYKWKIEFIKA
FT                   FNEMEKRLRNIEYEKHDKLAFRQSLGYKSQLAQQKQKYENEIKALKYDLEQSKNNFKDK
FT                   LNCILAKNGLYAFDFKTFKNYALKLEKMLKDLKDDENKENKLLLRMQNDFLECLELYKS
FT                   INI"
FT   gene            982279..983313
FT                   /locus_tag="C1336_000250101"
FT                   /note="C1336_000250101 identified by Glimmer3 with a raw
FT                   score of 13.57."
FT   CDS             982279..983313
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250101"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250101 identified by Glimmer3 with a raw
FT                   score of 13.57. Gene function extrapolated from CJE0587
FT                   (CP000025.1) after blastn alignment (99.36 percent identity
FT                   over a 781 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30839.1"
FT                   /translation="MALPSMGHTAPATENVKLKQSIYETIIKIGATETPILNKIGTSKV
FT                   TNPLTHSWITDTFEEPKKNANLELSKFVGETKNTAQKTTNATQIFITEAMVSKALLKAN
FT                   QYGGNEMEYQIGKKTKEHKMDMEYALFGLGRDSDVKKSVFKDYVQAQEATSGEMAGLFH
FT                   YIAKGKDSFADGKRGNVLAFDETGDWSGTATELTEDKLNQILQTIWNSGVTPKDVFLGA
FT                   DLKGAINKFATRILGNETKLAGQVVSLETDFGTVNFHMHRLLSPKYGLGDVLIAGDFEY
FT                   MKHGLYIPTMIEDVPTDITAKAKRFYTQSTLEVRNADAFAIGVGLTSGNNAKAKAVLKA
FT                   AKGA"
FT   gene            983313..983717
FT                   /locus_tag="C1336_000250102"
FT                   /note="C1336_000250102 identified by Glimmer3 with a raw
FT                   score of 12.84."
FT   CDS             983313..983717
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250102"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250102 identified by Glimmer3 with a raw
FT                   score of 12.84. Gene function extrapolated from CJE0588
FT                   (CP000025.1) after blastn alignment (99.51 percent identity
FT                   over a 405 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30840.1"
FT                   /translation="MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVPS
FT                   VLLKNVEQGEKVFRQVRNNHFLIIPDEPDFDNEKEHLMIDETLSFAVINYVCYLITRCE
FT                   EKDFLALCDKIIYEYIANDGKELDDERTWL"
FT   gene            983698..983892
FT                   /locus_tag="C1336_000250103"
FT                   /note="C1336_000250103 identified by Glimmer3 with a raw
FT                   score of 8.52."
FT   CDS             983698..983892
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250103"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250103 identified by Glimmer3 with a raw
FT                   score of 8.52. Gene function extrapolated from CJE0589
FT                   (CP000025.1) after blastn alignment (96.41 percent identity
FT                   over a 195 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30841.1"
FT                   /translation="MKEHGCNCNFTKKFNRALSYKDYIQSINSADFIAYLDDKKWLLAM
FT                   DDLLFFCEKRIKDSDYYEG"
FT   gene            983895..985556
FT                   /locus_tag="C1336_000250104"
FT                   /note="C1336_000250104 identified by Glimmer3 with a raw
FT                   score of 13.60."
FT   CDS             983895..985556
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250104"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250104 identified by Glimmer3 with a raw
FT                   score of 13.60. Gene function extrapolated from
FT                   JJD26997_1143 (CP000768.1) after blastn alignment (94.22
FT                   percent identity over a 225 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30842.1"
FT                   /translation="MGTSLNELKTGREKLEIINQVLARISDVATALDNTRIEEIIGLKE
FT                   QVNNFYTQTLELKNLVIENSELTQSNTDFVKNKKDEIEKISNKINDTLNNIENIYNNII
FT                   ELEKNINNGVNIVKEKYPELNEFNKNFEIIKIKLEEYYDIAVDFNAGLEKVEENKNLTK
FT                   SYLDLSIELKEQILQELEHAQSIKDDLHSNIELVNKLVSNIIATKNEIISITNDFKNVK
FT                   SEVQDIVNDAEATIKLKINTILFENQRLNQNMINLLKRCEKLEDEIVGKYEDVLEAIEI
FT                   VNKADETINDLNNAILASKEFANDLKSYTQIIKDFKIQIDNLKLDLQSYNDRLKGELDL
FT                   KANEIDISIQAKLSDINLLKEQMQTLYENTKNTTDTALANFIERAKIANEDLGRLTEVA
FT                   RTELANDKTAIESYLLELKKSIIDEMKKVSSDITDETSGILAQKNQIELIIAQGKSSLD
FT                   ALTNEFNSNYQNKLNDFNSNANEKLRAINSLSEESIANIQSKTDENIGKLNTASEEKLA
FT                   KFDEIIKDNLGGIYSHIFSIENVLLDKKIIKLSYKE"
FT   gene            985560..986621
FT                   /locus_tag="C1336_000250105"
FT                   /note="C1336_000250105 identified by Glimmer3 with a raw
FT                   score of 9.37."
FT   CDS             985560..986621
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250105"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250105 identified by Glimmer3 with a raw
FT                   score of 9.37. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30843.1"
FT                   /translation="MADLEQVASDLNSASQSLQELREKYDGALDLLDNKNTEITAALES
FT                   AKSNALQEVQTASDTATSQISQLKDTSLNLVNEAKNTATSEISSKKDEALGEFSQATSE
FT                   FNSTKEEALFQIEQAKTEQGEKITALEQAKESITADLNKKSKLLTENLTWEVGSGGDYE
FT                   DLQTAINEASKYINFGNYTITIKLKNLLSLSNVIHIINVNIPFVNLDFNGFILNYGLSF
FT                   YNSIFGKIIKANINSTGNCISAINNSKIILTDNTILNGYDGIISSSSSNITYLNSSNNN
FT                   ITINCQSGRFGIYANLGGKIEVQNSNIECNNGTTLCALTGGVINANESDIAGTSNQSNI
FT                   SFNTFTNNGYILK"
FT   gene            986631..987257
FT                   /locus_tag="C1336_000250106"
FT                   /note="C1336_000250106 identified by Glimmer3 with a raw
FT                   score of 14.29."
FT   CDS             986631..987257
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250106"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250106 identified by Glimmer3 with a raw
FT                   score of 14.29. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30844.1"
FT                   /translation="MKIVSKNGTIYQNLTVSIIRDHIYNVKQLLAIVSDDRELKFNDDF
FT                   TFIDDLTQDELNAGLEAVKEVLINSNETELLKEYFSMFCQASSEDAKLKYAKEFKKDEI
FT                   DKAKNNAIEGGVSYKDKIFQSAEKDRNLLTSTVSLFAITKQLPEGFVWISKDNEAVPFT
FT                   LEELIELGGIMANSVNTNTIKARTIKDKVEQAQTLEEIQSIKWDE"
FT   gene            987257..987484
FT                   /locus_tag="C1336_000250107"
FT                   /note="C1336_000250107 identified by Glimmer3 with a raw
FT                   score of 10.70."
FT   CDS             987257..987484
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250107"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250107 identified by Glimmer3 with a raw
FT                   score of 10.70. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30845.1"
FT                   /translation="MDFNTTMITSFAKDVEGLTPFGTLFVIFLLSLIINYKLFKGRMED
FT                   CRSDKERILEKLEHIKDRLDDLNFELRGKK"
FT   gene            987481..987876
FT                   /locus_tag="C1336_000250108"
FT                   /note="C1336_000250108 identified by Glimmer3 with a raw
FT                   score of 11.90."
FT   CDS             987481..987876
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250108"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250108 identified by Glimmer3 with a raw
FT                   score of 11.90. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30846.1"
FT                   /translation="MNELFNVLKDGGIVAFLFFCLCSVSYFAYILFQKTDKTQGILVEI
FT                   KNIERKNNENNNNILKEIQISNKIAEAHLDTSKAQLESSNKIIDLHSKILGDKLDKLDK
FT                   NIDELKFEIKRYENTELATLIKRKENE"
FT   gene            987873..988337
FT                   /locus_tag="C1336_000250109"
FT                   /note="C1336_000250109 identified by Glimmer3 with a raw
FT                   score of 9.20."
FT   CDS             987873..988337
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250109"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250109 identified by Glimmer3 with a raw
FT                   score of 9.20. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30847.1"
FT                   /translation="MKIAFYKVKGNDKATFLDKLIAFFTSSWKERLNGDFLKSYSHCEI
FT                   ILDNLMISSSPRDKGVRIKEFKDTGRWDFIEINNTNEVKIKEFLYSQIGKKYDFLGILG
FT                   FFTFTKDSEDKWFCSEIIVRALQIGGLVKLGEMNAGSSSPNRLYKKLKEL"
FT   gene            988337..988801
FT                   /locus_tag="C1336_000250110"
FT                   /note="C1336_000250110 identified by Glimmer3 with a raw
FT                   score of 13.40."
FT   CDS             988337..988801
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250110"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250110 identified by Glimmer3 with a raw
FT                   score of 13.40. Gene function extrapolated from CJE1445
FT                   (CP000025.1) after blastn alignment (91.14 percent identity
FT                   over a 463 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30848.1"
FT                   /translation="MKIAINRRYTGKTCVIGKFKVLNDDDDNILFECFSLEEDKEGLES
FT                   GKDLRIPEGNYNLRRHTPSRFENTLREITGKNDDEMINVYNNEVPASRAILIHWGNTDK
FT                   DTQGCILLGLTKDNNNESVGQSRQACKEFYDLMHGKNLEDIKLEITNELA"
FT   gene            989033..989416
FT                   /locus_tag="C1336_000250111"
FT                   /note="C1336_000250111 identified by Glimmer3 with a raw
FT                   score of 9.16."
FT   CDS             989033..989416
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250111"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250111 identified by Glimmer3 with a raw
FT                   score of 9.16. Gene function extrapolated from CJE0598
FT                   (CP000025.1) after blastn alignment (96.33 percent identity
FT                   over a 109 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30849.1"
FT                   /translation="MINLLFGNAKLYIALALMTILAGYFYLRLDSTKAKLEKSQNDLAL
FT                   ALKINENNQEKLKELNQIHNAELNALNEANKEKNQVQERVQYVKKYIYTSNENNITKLF
FT                   NNVINRLWNDNNSSYNKNRNSKS"
FT   gene            989349..989567
FT                   /locus_tag="C1336_000250112"
FT                   /note="C1336_000250112 identified by Glimmer3 with a raw
FT                   score of 5.58."
FT   CDS             989349..989567
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250112"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250112 identified by Glimmer3 with a raw
FT                   score of 5.58. Gene function extrapolated from CJE0599
FT                   (CP000025.1) after blastn alignment (96.09 percent identity
FT                   over a 179 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30850.1"
FT                   /translation="MLLIGCGTTTTQVITKIEIQKVRIPQELLTLSPLEKPIAKNELDI
FT                   LNAYSMLFYKYKQCEIQISKIKELNNE"
FT   gene            989560..990051
FT                   /locus_tag="C1336_000250113"
FT                   /note="C1336_000250113 identified by Glimmer3 with a raw
FT                   score of 14.00."
FT   CDS             989560..990051
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250113"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250113 identified by Glimmer3 with a raw
FT                   score of 14.00. Gene function extrapolated from CJE0600
FT                   (CP000025.1) after blastn alignment (98.98 percent identity
FT                   over a 492 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30851.1"
FT                   /translation="MSNTNVDYNKRLEAFKEIYPQILEMSLAEKSPFGEFKKLLEQFGN
FT                   DNVIRNDQQFQSLAQALVSVGQTIVAQSQNTALSMILQGDENELNAEKALLLRAQTETE
FT                   KAKPALIARQTSQIDDNLRIEAAKVTQSVQFGYCTGGLDIPQEIMKLVKEKIENIEKSS
FT                   "
FT   gene            990051..991775
FT                   /locus_tag="C1336_000250114"
FT                   /note="C1336_000250114 identified by Glimmer3 with a raw
FT                   score of 7.03."
FT   CDS             990051..991775
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250114"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250114 identified by Glimmer3 with a raw
FT                   score of 7.03. Gene function extrapolated from CJE0601
FT                   (CP000025.1) after blastn alignment (99.15 percent identity
FT                   over a 590 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30852.1"
FT                   /translation="MLIDEKRLMRNYTLKPAYPSNIGELDTQEVYKQWFTYAMIGVNKY
FT                   VELLHKQLVRKGRSQIQNINHPLFKNSYIVKKYNIKSSSTAPYNKENYNDLGLNQFFVG
FT                   QDPYKPYQGDPSSENGIYHDICEIRTNYNLGSMQYYYGFPNNLALLFEKEKVWKYNGKG
FT                   FFYIDEKINFKDILNKALENINYDMLINDIEVVIFSQTIQKNNEWIYPSIDDIKIPEIK
FT                   VENVEFKPTFGKPYKKLCIDVEKFYNDFKELNKNIFRIEKVEITYSVYEKAQKTRESDP
FT                   SKIYYTLTSKKISFFEVFNSIKENYKCKYATPLCFYNSFNLVCYEEPYIAYSYPNNKSF
FT                   GKKDTSVTPSVYPLYRKSSNLPYGRRDRWFALWDSFYYLYVYEKSNKGILSFLVPIVTI
FT                   VLAVATWWIGGQGAWLGTLIGVSEGVAAGITLGISLGLAVGSLTGNKTFSILNAVWGLV
FT                   NFLGAWGANNWNLAADFTKNTAQAAQEMTTFGSTLNIVGNLLSGASKIFDVVQSITANT
FT                   PDMINEQSDDSDNEGGNGSEAEELAKDAINPTLWYNFETADILNEKIEKNRNLIFTF"
FT   gene            992074..992985
FT                   /locus_tag="C1336_000250115"
FT                   /note="C1336_000250115 identified by Glimmer3 with a raw
FT                   score of 12.75."
FT   CDS             992074..992985
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250115"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250115 identified by Glimmer3 with a raw
FT                   score of 12.75. Gene function extrapolated from CJE1015
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 234 bp alignment) - for clarity, the
FT                   original product name 'membrane protein, putative' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30853.1"
FT                   /translation="MFVFIPLFTIFILLAGGYFAKRIGVLKQKQARTFLDFAIIFALPC
FT                   LIFDKAYHLNFDFSLIIFIFIGLFSCILAAFFAILIGKVFHFSKVTLVSMFLLSCFGNT
FT                   IFVGMPIVAGIFNDPQFSAEVIFYDALATTLPISLFGPFILSLGNGEKVSLLANVKKIL
FT                   SFPPFLALLFGFLCKLITLPEFIFSPIRLFGASATPVALFAIGLGLGFMAIKTSYKPTV
FT                   IVIFAKMILAPLFFVFCLKIFNLELKNSTIVAIIESAAPTMTLAGAMVMKAKLDSNLAV
FT                   SAVAFGVLFAFVSMPILIWALL"
FT   gene            complement(992993..996505)
FT                   /locus_tag="C1336_000250116"
FT                   /note="C1336_000250116 identified by Glimmer3 with a raw
FT                   score of 12.11."
FT   CDS             complement(992993..996505)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250116"
FT                   /product="2-acylglycerophosphoethanolamine acyltransferase
FT                   / acyl-acyl carrier protein synthetase"
FT                   /note="C1336_000250116 identified by Glimmer3 with a raw
FT                   score of 12.11. Gene function extrapolated from
FT                   CJJ81176_0955 (CP000538.1) after blastn alignment (99.32
FT                   percent identity over a 146 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30854.1"
FT                   /translation="MQKKSFLKIYGLIPFLLIAFINAFVDLGHKIIIQNTIYKAYEGSE
FT                   QLFLNAIVNALILLPFILMLSPSGFLADKYPKNIVMKISAIFNVILTLIICICYYSGAF
FT                   WMAFIFTFIMGAQAAIYSPSKYGFIKELVGKDFLAMGNGVINAVSIMAILAGMALFSLS
FT                   FESLYSSTYNQTDEILKEVAPLGIVLILFSCIEVFFAWRLPKLKQTNKDLVFNKKDYIH
FT                   GKLLINNLKLVFKNKTIWLCIIGISFFWAISQLYLVSFPVFVKNELFIENTFYVQISLA
FT                   FSGIGVILGSLVAGKFSKNYIELGLIPLGALGMFLMAFLMPYFVSLLSYSFLFFFFGFC
FT                   GALFIIPLNTLVQFHAKENELGQILAGNNFFQNIAMLGFLLLATLFAKFEINVVYLFYF
FT                   ITLVTFIGSFYILLKLPFSLVRILLSIAFLQRYRLLVEGFENIPEKGGALLLGNHISFI
FT                   DWAVVQMAIPRKIYFVMERSIYSKWYIKIFLDKFGIIPVSSTGSKTSLELIAKHIKEGN
FT                   LVCLFPEGTLSRHGQLNEFKAGFELACEYLSEDDGKIIPFYIRGLWGSAFSRSDEEFSA
FT                   RNRTLNKRKIAIAFGKAMPLHSKKDEVKAKVFELSFMAWKSQCEAMHTIARAWIDTAKK
FT                   NLNQIAIIDTLAGDISYRKMLSLSLILNFFIKRKSKELNINSRRGSYAPKEEAIGILLP
FT                   ASFASSLTNLSVLIAEKIAVNLNFTAGEKALKAAIKNAQISQIYTSKTFLEKLANKGIN
FT                   LNFDTNIHLIYFEDIVEDFKMQKTKIFSMMLAVSIIPSFILKSIFTPSKNNLAIAAILF
FT                   SSGSEGSPKGVMLNNRNILSNIAQISDVLCTRNNDVILSSLPPFHAFGLTVTTFLPLLE
FT                   GIKSITFADPTDALGVAKTVAKNNVTIMCGTSTFLGIYARNKKLDALMFESLRIVVSGA
FT                   EKLKNEVRTAFEMKFKKSIFEGYGATETTPVASVNLPNRFDADYWLIHRANKEGSVGMP
FT                   LPGTAVRIVDPNNYENLKTNEDGLILIGGHQVMVGYLNNKEKTDEVIKEIDGIRWYNTG
FT                   DKGHLDEDGFLYIVDRYSRFAKIGGEMISLGAIEEEIAKFIDTEVVKFCATSLEDEKKG
FT                   EQIALLIECNNEIFERVCEIIKNSNIPTLFKPRYYFQIEKIPLLGSGKVDLKKVKELAK
FT                   NLAI"
FT   gene            complement(996530..996916)
FT                   /locus_tag="C1336_000250117"
FT                   /note="C1336_000250117 identified by Glimmer3 with a raw
FT                   score of 14.93."
FT   CDS             complement(996530..996916)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250117"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250117 identified by Glimmer3 with a raw
FT                   score of 14.93. Gene function extrapolated from CJE1017
FT                   (CP000025.1) after blastn alignment (97.95 percent identity
FT                   over a 293 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30855.1"
FT                   /translation="MLIIGYKLLKNLDFSFIESVEEVKDNKVYCIVYDEKLISYLSQND
FT                   FEFAILVQNKDEIFLANALGAKFLLCNDKKLAKFASKVAEFYVFDSRVLMIVDKLENFK
FT                   KFYKLKIDGIILKDNIDNFPKFVK"
FT   gene            complement(996983..997059)
FT                   /locus_tag="C1336_000250344"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(996983..997059)
FT                   /locus_tag="C1336_000250344"
FT                   /product="tRNA-Asp"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(997111..997186)
FT                   /locus_tag="C1336_000250343"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(997111..997186)
FT                   /locus_tag="C1336_000250343"
FT                   /product="tRNA-Val"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(997193..997268)
FT                   /locus_tag="C1336_000250342"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(997193..997268)
FT                   /locus_tag="C1336_000250342"
FT                   /product="tRNA-Arg"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(997288..997363)
FT                   /locus_tag="C1336_000250341"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(997288..997363)
FT                   /locus_tag="C1336_000250341"
FT                   /product="tRNA-Lys"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(997368..997444)
FT                   /locus_tag="C1336_000250340"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(997368..997444)
FT                   /locus_tag="C1336_000250340"
FT                   /product="tRNA-Asp"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(997496..997571)
FT                   /locus_tag="C1336_000250339"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(997496..997571)
FT                   /locus_tag="C1336_000250339"
FT                   /product="tRNA-Val"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(997579..997654)
FT                   /locus_tag="C1336_000250338"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(997579..997654)
FT                   /locus_tag="C1336_000250338"
FT                   /product="tRNA-Lys"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(997716..998501)
FT                   /locus_tag="C1336_000250118"
FT                   /note="C1336_000250118 identified by Glimmer3 with a raw
FT                   score of 6.73."
FT   CDS             complement(997716..998501)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250118"
FT                   /product="amino acid ABC transporter, permease protein,
FT                   His/Glu/Gln/Arg/opine family"
FT                   /note="C1336_000250118 identified by Glimmer3 with a raw
FT                   score of 6.73. Gene function extrapolated from CJE1018
FT                   (CP000025.1) after blastn alignment (98.74 percent identity
FT                   over a 478 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30856.1"
FT                   /translation="MSLFIQKNKNFKPLKPLSKSKIITNLILLILFLILFCYCSFSISA
FT                   YHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFLSIFYI
FT                   ELIRGTPLLVQVLLIYYIVANNLGLDNRYVAGVIILSCFSAAYLAEIFRAGILSISISQ
FT                   LESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQE
FT                   INSYTFATLEAYVILAITYLVLTLPINIFSRYLERKCQK"
FT   gene            complement(998524..999729)
FT                   /locus_tag="C1336_000250119"
FT                   /note="C1336_000250119 identified by Glimmer3 with a raw
FT                   score of 14.21."
FT   CDS             complement(998524..999729)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250119"
FT                   /product="permease, putative"
FT                   /note="C1336_000250119 identified by Glimmer3 with a raw
FT                   score of 14.21. Gene function extrapolated from
FT                   CJJ81176_0965 (CP000538.1) after blastn alignment (98.51
FT                   percent identity over a 1206 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30857.1"
FT                   /translation="MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAM
FT                   AIMNGFDKEFEKRFFVMNYPITILPKFYAPVNDEFIDELRKTFPNLLFSPYISTQVVVK
FT                   GDNRFEGGVLFGVNFNDEKKINEVVAKALKDENLSGFDILVGSALIDEFGLHKNDKLSL
FT                   IFSNLNPSGFSLVPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPKNPNYDGV
FT                   HVYSDNAFKDVEKIKSYLKDDYAVVGWWEQNKNFFSALELEKRALFIVLMLIILVASLN
FT                   IVSSLLMIVMNRRSEIALLLALGASKNEVKKSFFALGMLIGGGGMIVGVMLAFFALWLL
FT                   GNFDIVTLPADVYGTSKLPLDLSLMDFSLTIIGALIIIALSSFYPAKKATQINILDTLR
FT                   NE"
FT   gene            complement(999726..1002314)
FT                   /locus_tag="C1336_000250120"
FT                   /note="C1336_000250120 identified by Glimmer3 with a raw
FT                   score of 15.60."
FT   CDS             complement(999726..1002314)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250120"
FT                   /product="translocase"
FT                   /note="C1336_000250120 identified by Glimmer3 with a raw
FT                   score of 15.60. Gene function extrapolated from C8J_0885
FT                   (CP000814.1) after blastn alignment (97.61 percent identity
FT                   over a 2589 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30858.1"
FT                   /translation="MFLNTLKAVFGTKNDREVKKYFKRVAQINALEGKYQNLSDDELKA
FT                   EFAKFKEQILSGEKNENDILNDVFAIVRETGKRTLNMRHFDVQLIGGMVLHDGKIAEMK
FT                   TGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVILSSQN
FT                   NDIEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKVEKVQREHNFVIVDEVDSILIDEAR
FT                   TPLIISGPTNRTLDGYIKANEVAKQMQKGEAVLPPAKPEGDFVVDEKNRSVLITEAGIA
FT                   KAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFTGRLSEG
FT                   RRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEATEFSQIY
FT                   SLDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKKANAKGQPVLVGTASIERSEV
FT                   FHNMLVKEKIPHHVLNAKNHEQEALIIQDAGKKGAVTIATNMAGRGVDIKIDDEIRALG
FT                   GLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGDRIKSIMDRLG
FT                   IEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTIYRYRNELLDEN
FT                   YDIRAKISQNIAEYSANVMNDYMLDESGSNVNFENLKAKILYECSTQISEKDFENLSVI
FT                   EMQDKLSQILENSYNEKMSRLEIKELRNIERILYLQVLDNAWREHLYQMDILKTGIGLR
FT                   GYNQKDPLVEYKKESYNLFLELVNRIKFDSIKLLFSVQFNQEEVQNLENKANEENEKLL
FT                   QSSVEMGASEDNLGEAEFKKVPRNAPCPCGSGKKFKECHGKSGPKQGILA"
FT   gene            1002414..1002923
FT                   /locus_tag="C1336_000250121"
FT                   /note="C1336_000250121 identified by Glimmer3 with a raw
FT                   score of 8.80."
FT   CDS             1002414..1002923
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250121"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250121 identified by Glimmer3 with a raw
FT                   score of 8.80. Gene function extrapolated from
FT                   JJD26997_1167 (CP000768.1) after blastn alignment (98.22
FT                   percent identity over a 394 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30859.1"
FT                   /translation="MKKTFLIFFIFIGQLFALDLNFNTFSSNFIQIVKSKNSTLSYSGH
FT                   FILSKDQAYWSYDTPSKKEIYINKNQVTIIEHDLEQVIFSHLDNIPNLNEIFKKASLID
FT                   KDKLVAKYDNINYTIKLNQEQIQSISYKDEFENDVIINLNNQIKNPKINSDVFKAKIPQ
FT                   NYDIVR"
FT   gene            complement(1002920..1003654)
FT                   /locus_tag="C1336_000250122"
FT                   /note="C1336_000250122 identified by Glimmer3 with a raw
FT                   score of 14.25."
FT   CDS             complement(1002920..1003654)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250122"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000250122 identified by Glimmer3 with a raw
FT                   score of 14.25. Gene function extrapolated from C8J_0887
FT                   (CP000814.1) after blastn alignment (99.43 percent identity
FT                   over a 175 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30860.1"
FT                   /translation="MKKIFLSVFLALSLNAQNLEIDKIRTDLYSKSGANVLKKVEISLE
FT                   FDGNNLKENENKLIDAVNTVISGFFYEDIFTEIGKNNFKKTLEKFLDKKYKIKLDDIYI
FT                   ISLSGVEKFDLEEFKRFLESTEAKEKGMGSEVKKALENLEVPKTQVPGVEKIPTPSVPN
FT                   LEAKQVEQLFKDSDEENKNDNGEINIDNLNTPKMTPDIEEKIKRDLIANPPQIFKENNA
FT                   SKPYHLPQTGYDIKLDENTTQN"
FT   gene            complement(1003664..1005007)
FT                   /locus_tag="C1336_000250123"
FT                   /note="C1336_000250123 identified by Glimmer3 with a raw
FT                   score of 11.23."
FT   CDS             complement(1003664..1005007)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250123"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250123 identified by Glimmer3 with a raw
FT                   score of 11.23. Gene function extrapolated from C8J_0888
FT                   (CP000814.1) after blastn alignment (99.22 percent identity
FT                   over a 258 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30861.1"
FT                   /translation="MLDKLEKILAYDNVFLSGGAGVGKSFLTNELIKSYRKQKKLAIAL
FT                   GSSALSAFNIGGVTLHSFFCLGYCDDMMKLSTLDRNQKQKEKLTKLKELLKTIELIIID
FT                   EISMVSASVFEMIGFRLKNSQFNGKILVVGDFFQLPPVIKEKKETLFNHSYYAFSSFFW
FT                   QDLNFKNIKLSQPKRTQNMEFYNYLSLIRQGFLDEKILSFFESLRIDYKELENLEDDYT
FT                   LLCGINKKVNNINQEKLSKLETPLVCFKAQVKKEDKRIKDEELDSWIRSLNILEELNIK
FT                   IGARIIFCVNNWDKNYYNGEQGIIEDILYEEEKIYISIIKNNGMKILLEPYTFFMEELE
FT                   QSGKDLVVNILASVTQFPIKLAYAITIHKSQGMSIEKLVCDIDHIFENGQLYVALSRAT
FT                   NPNTLKIYSTKKINFGFYFANILKIDSNVIDFYKKHNFLDLEIQEQII"
FT   gene            1005056..1006402
FT                   /locus_tag="C1336_000250124"
FT                   /note="C1336_000250124 identified by Glimmer3 with a raw
FT                   score of 10.82."
FT   CDS             1005056..1006402
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250124"
FT                   /product="lipoprotein, putative"
FT                   /note="C1336_000250124 identified by Glimmer3 with a raw
FT                   score of 10.82. Gene function extrapolated from
FT                   CJJ81176_0970 (CP000538.1) after blastn alignment (99.75
FT                   percent identity over a 407 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30862.1"
FT                   /translation="MKSCLYFTFIVLFLTACSTKNLTSLHHENLEQKNENQHYAKLEYE
FT                   QNVSILPQFAYDINFDAKRYKKYFFNPWHDSFKNNKGQNIFWSFPLYLNSKNTYYFFNK
FT                   QIIPLSWFKNAINNANIQEFGKLNQKALIIQNTIVKNLPTQRAILKNPFFENEGIPFDY
FT                   ASDGILNAGTPVLISHFSKDKRYAFVLGEAGFGFVESKNLEFFSNDRAKIYENLSFITP
FT                   LKEKFPIYSEDGKFFFESRIGAIYPYYKEDKNYFYGKIGSKKYKISKKDVSKFPLQFND
FT                   KNLKNQLSQVLNLPYGWGGYNFERDCSLLTRDIFSAFGLYLPRNSAAQKNSFNHFDIST
FT                   LSNSQKKDFLNRFGKAYLSLLYLPGHIMLYAGQITDNNIAIHNIWGLRKDATQRLLISS
FT                   SVITSLEIGKNEILEDNLLLSRLKEISFINLNKQEKEQIKSYLENIQNK"
FT   gene            complement(1006414..1007286)
FT                   /locus_tag="C1336_000250125"
FT                   /note="C1336_000250125 identified by Glimmer3 with a raw
FT                   score of 14.88."
FT   CDS             complement(1006414..1007286)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250125"
FT                   /product="hydrolase, carbon-nitrogen family"
FT                   /note="C1336_000250125 identified by Glimmer3 with a raw
FT                   score of 14.88. Gene function extrapolated from C8J_0890
FT                   (CP000814.1) after blastn alignment (99.31 percent identity
FT                   over a 873 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30863.1"
FT                   /translation="MKIALIQQKFHSNKEQTIKKTCEFIEEASKQGAELICLGELHQSE
FT                   YFCQSENVDFFDYANDYEKDVKFWANIARKNQIVLITSLFEKRSAGLYHNTAVVFEKDG
FT                   SIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPINTSLGKLGVLICWDQWYPEAARIMAL
FT                   KGAEILIYPTAIGWFDKDKDEEKQRQLNAWLGVQKGHAIANGLYVVAINRVGFEKDASG
FT                   VEEGIRFWGNSFVFGPQGEELCLLDSQNECVKIIEIDKKRSENVRRWWPFLRDRRIEYF
FT                   ADLTKRFID"
FT   gene            complement(1007283..1008170)
FT                   /locus_tag="C1336_000250126"
FT                   /note="C1336_000250126 identified by Glimmer3 with a raw
FT                   score of 11.32."
FT   CDS             complement(1007283..1008170)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250126"
FT                   /product="putative transmembrane transport protein"
FT                   /note="C1336_000250126 identified by Glimmer3 with a raw
FT                   score of 11.32. Gene function extrapolated from C8J_0891
FT                   (CP000814.1) after blastn alignment (99.60 percent identity
FT                   over a 249 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30864.1"
FT                   /translation="MSLQKKATLVASLCAIVLALVKFIVGLTSGSVAVLSSAIDSLMDF
FT                   AISAFNFLALKKSSQKANENYNFGFSKIEALMGLLEGVFIVGVGIFIFYESILKIYYKE
FT                   EIKDLNSSIYVMIFALIMTFFLVLFLNYVAKKTKSLIIESDALHYKTDCLTNACTLGAL
FT                   VLIYFTNLHIIDAIFGIVISLYTAFSAFKIIKKALAFLMDEALPKEQVDKICILISNNP
FT                   EIISYHELKTRKTPSCNYLSVHLVFCPIISLLNAHKISDEIEEGVRKMFENEKWDIQIH
FT                   LDPYDDAEQERQRQ"
FT   gene            complement(1008167..1009144)
FT                   /locus_tag="C1336_000250127"
FT                   /note="C1336_000250127 identified by Glimmer3 with a raw
FT                   score of 11.97."
FT   CDS             complement(1008167..1009144)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250127"
FT                   /product="peptidyl-arginine deiminase family protein"
FT                   /note="C1336_000250127 identified by Glimmer3 with a raw
FT                   score of 11.97. Gene function extrapolated from
FT                   CJJ81176_0973 (CP000538.1) after blastn alignment (97.14
FT                   percent identity over a 978 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30865.1"
FT                   /translation="MIKSIPEWSEQEYLMLSLPHEKSDWSPYLEEILQSYKEFVKVVSE
FT                   FQKVLLIAPKQSDFENFKDIKNVEFFKCDTNDTWIRDFGAIDIVENNRLKALDFTFNAW
FT                   GNKFQSELDNAVNSKLFKEKFKEGLKKVDFVLEGGSIDFNGEGVMLTSSHCLLNENRNS
FT                   HLNKTQIDIKLKEIFGLKQIIWLENGFIKGDDTDHHIDTLARFIDKNTIAHCVCEDEED
FT                   EHYLPLQKMKEELKKTGFDLVELPIPKPLYYKGRRLGATYANFVFINNALIVPFYKDKN
FT                   DEIITKRLSKALPNHKIIGVDARVFLRQNGSLHCSCQNRFKGLR"
FT   gene            complement(1009243..1009677)
FT                   /locus_tag="C1336_000250128"
FT                   /note="C1336_000250128 identified by Glimmer3 with a raw
FT                   score of 11.88."
FT   CDS             complement(1009243..1009677)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250128"
FT                   /product="putative lipoprotein"
FT                   /note="C1336_000250128 identified by Glimmer3 with a raw
FT                   score of 11.88. Gene function extrapolated from
FT                   JJD26997_1173 (CP000768.1) after blastn alignment (97.18
FT                   percent identity over a 319 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30866.1"
FT                   /translation="MKKTLQIALAATFFAGCASTSVTSSASKGNNELVQNQLFKIEKII
FT                   VNGKTFDPKNAEESPNISFENNKFYGYSGCNRFFGSYQTKADTLQIEGDRVASTQMLCH
FT                   PMDVMDFENSFLSNFKGTFKISNENGKLVLSNDEMKIFFK"
FT   gene            complement(1009687..1011279)
FT                   /locus_tag="C1336_000250129"
FT                   /note="C1336_000250129 identified by Glimmer3 with a raw
FT                   score of 13.14."
FT   CDS             complement(1009687..1011279)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250129"
FT                   /product="putative HAMP containing membrane protein"
FT                   /note="C1336_000250129 identified by Glimmer3 with a raw
FT                   score of 13.14. Gene function extrapolated from Cj0952c
FT                   (AL111168.1) after blastn alignment (99.73 percent identity
FT                   over a 375 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30867.1"
FT                   /translation="MFKTIGFKVSAAIFVVLLISFIVMQVILNLDFKNTANKMSRANLD
FT                   TVSTSVFQTMRMAMNLGDPEKIKEAIEDAKSIEGISDIKIYPSKDTIDLFEMKAPQISN
FT                   DKRIIEQFSNPKIQALEENVNGVVHLRLIRPLIADESCVACHANANVGSVIGVMDISHS
FT                   LEGVQKDISKTSQSYIIIFTIALIFTLCVVLLMLKVVVGKPVLELLNHAKELAQGSGNL
FT                   KARISVKGQDEIALACGYINQFIEKTHKAVSGASHNSKNVEKQSNLLNSNAISLSDISS
FT                   QSHKQIDQSFKLGANVGNELGELASLSNKANSANEKSFLLLEQMLKSLFNVANKVSTVS
FT                   QNENELAKKVENMVNQAGNIQKATQMMDEIADKTNLLSLNAGIEAARAGAFGRGFSVIA
FT                   EDVRQLAQNSEEFLGNVAQITKELLQSINEVSAELKKNAQSIQALNDDTTLLVDDANEV
FT                   KLCNEDARALVTQCTEKIKISQENIQNLLSRMQKNVEVSEKNEEISKILLQVADELKIV
FT                   CHNLESELNQFQI"
FT   gene            complement(1011378..1012910)
FT                   /locus_tag="C1336_000250130"
FT                   /note="C1336_000250130 identified by Glimmer3 with a raw
FT                   score of 16.54."
FT   CDS             complement(1011378..1012910)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250130"
FT                   /product="phosphoribosylaminoimidazolecarboxamide
FT                   formyltransferase / IMP cyclohydrolase"
FT                   /note="C1336_000250130 identified by Glimmer3 with a raw
FT                   score of 16.54. Gene function extrapolated from C8J_0895
FT                   (CP000814.1) after blastn alignment (98.83 percent identity
FT                   over a 1533 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30868.1"
FT                   /translation="MRALLSVSDKEGIVEFGKELGNLGFEILSTGGTFKLLKENGIKVI
FT                   EVSDFTKSPELFEGRVKTLHPKIHGGILHKRSDENHIKQAKENEILGIDLVCVNLYPFK
FT                   KTTIMSDDFDEIIENIDIGGPAMIRSAAKNYKDVIVLCDPLDYEKVIETLKKGQNDENF
FT                   RLNLMIKAYEHTANYDAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQKGALYE
FT                   FDVFFSANFKALKGEASFNNLTDINAALNLASSFDKAPAIAIVKHGNPCGFAIKENLVQ
FT                   SYIYALKCDSVSAYGGVVAINGTLDEALANKINEIYVEVIIAANVDEKALTVFEGKKRI
FT                   KIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEVGEDELKNAKLMSQREASKEELKDLE
FT                   IAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIAKAKEMGLDLQGCVLASEA
FT                   FFPFRDSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHFLH"
FT   gene            complement(1012913..1013683)
FT                   /locus_tag="C1336_000250131"
FT                   /note="C1336_000250131 identified by Glimmer3 with a raw
FT                   score of 17.45."
FT   CDS             complement(1012913..1013683)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250131"
FT                   /product="DnaJ domain protein"
FT                   /note="C1336_000250131 identified by Glimmer3 with a raw
FT                   score of 17.45. Gene function extrapolated from CJE1034
FT                   (CP000025.1) after blastn alignment (97.65 percent identity
FT                   over a 639 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30869.1"
FT                   /translation="MTLVLIILVVLVFYWYYKTWGKQDFLNSATRGAKGFAKGFARGVM
FT                   EERMDEFKRRMNYYVIALLAKIAKSDGRVSENEAEMIKDLLDANAKDEKERAFLKASFN
FT                   EHKENLSDAFYVAKDFLKEVPLPKNERFNVLRVLVFMALIDADFNAKKREILEQIAKAF
FT                   DIAKSELDAFIASLSNLKSAKKELSLDEAFAILELPNNVDLNAVKKQYRNLAKKYHPDI
FT                   LNANNVSEEELKIGVEKFQKINEAYEKVKKHLER"
FT   gene            complement(1013680..1015866)
FT                   /locus_tag="C1336_000250132"
FT                   /note="C1336_000250132 identified by Glimmer3 with a raw
FT                   score of 17.53."
FT   CDS             complement(1013680..1015866)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250132"
FT                   /product="phosphoribosylformylglycinamidine synthase"
FT                   /note="C1336_000250132 identified by Glimmer3 with a raw
FT                   score of 17.53. Gene function extrapolated from C8J_0897
FT                   (CP000814.1) after blastn alignment (97.90 percent identity
FT                   over a 2187 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30870.1"
FT                   /translation="MDKETIKAHKISDEEYAQILEILGREPNLLELGVISAMWSEHCSY
FT                   KSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAATGV
FT                   GGILRDVFTMGARVVAGLNSLKFGDIYDEKCGKHQKYLVKGVVNGISHYGNCMGVPTIG
FT                   GECAFDECFNGNILVNAFALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGAVMAS
FT                   DSFNEESKSLRPTVQIGDPFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSFEMAGR
FT                   SGSGMKLYLDKTPMRESGMTPYELMLSESQERMLICAKKGYEDKVIEIFKKWDLDAVVM
FT                   GEVTNTGKMELFWHDELVGLIPIEPLSEKAPVLSRPISEPKYLSEIKDYKFELKSSIQE
FT                   LFIQMFQNENINNKAFIYDQFDSSVQTNTIKADGGLGASAIRIKENGVSVAMAVECNSR
FT                   LNYVNPKIGAALAVASAGRKVACTGAKPLAISDCLNYGNPQNPEVMWQFAQGCEGIKEA
FT                   CKELNTPVVSGNVSLYNETEGVSIYPSPTIVSVGVLEDANKTLKASFEKENLSVYLLGE
FT                   SLGEFGGSMVMKIQDKKVSGSLKELDYKAELALWDLLYKANQNSLLECANSVGIGGIAM
FT                   TLAKMFAISSVGANLTSGFDDEKMIFDESASRAIVGLSKENEEAFLNLAKEFGVKAYKL
FT                   GVSTSQKHFKLDSIELSKAELDKFYFESFKEQIQ"
FT   gene            complement(1015877..1017205)
FT                   /locus_tag="C1336_000250133"
FT                   /note="C1336_000250133 identified by Glimmer3 with a raw
FT                   score of 16.07."
FT   CDS             complement(1015877..1017205)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250133"
FT                   /product="tRNA modification GTPase TrmE"
FT                   /note="C1336_000250133 identified by Glimmer3 with a raw
FT                   score of 16.07. Gene function extrapolated from C8J_0898
FT                   (CP000814.1) after blastn alignment (99.25 percent identity
FT                   over a 267 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30871.1"
FT                   /translation="MSDTIAAIATAHGVGSISIVRLSGERALEFALKLSHKTKLTPRHA
FT                   TFTKLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQTHGGFSVSEVLLEELVSLGARLA
FT                   LAGEFSKRACLNGKMTPLKALNIQDLILSKSALAAKIIARNMQGNLGELLEKIRTDLVK
FT                   TLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEVYTLSQSRKGLIEGFKIAIVGK
FT                   PNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESKDAIEQ
FT                   IGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDLENVFKN
FT                   IQNKNFIKLSAQKDITLLKEELQNYLNSFDSEGIMVSSLDLINACKISSEAIFRAKGLL
FT                   EESSLELFAFELNLAINELARFTKDFQRDEILDEMFGNFCLGK"
FT   gene            complement(1017198..1018016)
FT                   /locus_tag="C1336_000250134"
FT                   /note="C1336_000250134 identified by Glimmer3 with a raw
FT                   score of 12.23."
FT   CDS             complement(1017198..1018016)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250134"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250134 identified by Glimmer3 with a raw
FT                   score of 12.23. Gene function extrapolated from
FT                   CJJ81176_0980 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 515 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30872.1"
FT                   /translation="MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRKK
FT                   AIIEAKAKKRILKKNPKKEFTSSKNHKPETHEPKQENKIEIKNEKNKSQKEKYTVKSDE
FT                   IFDSFHRESKGVRNTQDILDEIRIQLVKLLESSQFKIELSELRMYDEDCVLIRLDGEDA
FT                   ALMIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQSVIEKIKIH
FT                   GRGQTKPLDGVLIKIALEQLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE"
FT   gene            complement(1018020..1019606)
FT                   /locus_tag="C1336_000250135"
FT                   /note="C1336_000250135 identified by Glimmer3 with a raw
FT                   score of 12.49."
FT   CDS             complement(1018020..1019606)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250135"
FT                   /product="inner membrane protein, 60 kDa"
FT                   /note="C1336_000250135 identified by Glimmer3 with a raw
FT                   score of 12.49. Gene function extrapolated from
FT                   CJJ81176_0981 (CP000538.1) after blastn alignment (98.56
FT                   percent identity over a 1250 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30873.1"
FT                   /translation="MNNSNNIFQQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQ
FT                   QNQQNTSINNTPNIQNTTTNTPSAALVSQDSVISKVQSKHFEAQIDSFGRISAFYLKDK
FT                   KYQNEKGEFINLVSKENSPYPLEMRFSDPSINSEAFKFPYIANSSNLFVDENGSQVLKL
FT                   TQNLSGLKIEKDITFYPKGNYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALVMDNK
FT                   ETIETYKDGDVEKDESANNVVMTSAFDRYYATFFYNFDKPLNVAISKDANKNPIVFAYS
FT                   DNEFKAGGYIGSKEHVILRSIDPRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNWGWAI
FT                   VVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMMELYKKHGA
FT                   NPMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFILPILMGATMF
FT                   LQQLITPMTIQDPMQAKIMKFLPVIFTFFFITFPAGLTLYWFANNLCSLVQQWVINKIF
FT                   AKEHHKKTSGA"
FT   gene            complement(1019603..1019944)
FT                   /locus_tag="C1336_000250136"
FT                   /note="C1336_000250136 identified by Glimmer3 with a raw
FT                   score of 3.82."
FT   CDS             complement(1019603..1019944)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250136"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250136 identified by Glimmer3 with a raw
FT                   score of 3.82. Gene function extrapolated from C8J_0901
FT                   (CP000814.1) after blastn alignment (98.70 percent identity
FT                   over a 77 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30874.1"
FT                   /translation="MICLKILRFYQKFLSPLKPAACRYYPNCSEYALWQFQKKNFFLAF
FT                   FSTFFRILRCNPFFKGGFDYPRVSKNFYPMNLCFKPIFLAKKQLCFLYIPYKNKSFYLI
FT                   KIIFKRTNQ"
FT   gene            complement(1019941..1020267)
FT                   /locus_tag="C1336_000250137"
FT                   /note="C1336_000250137 identified by Glimmer3 with a raw
FT                   score of 5.10."
FT   CDS             complement(1019941..1020267)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250137"
FT                   /product="putative ribonuclease P protein component"
FT                   /note="C1336_000250137 identified by Glimmer3 with a raw
FT                   score of 5.10. Gene function extrapolated from C8J_0902
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 327 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30875.1"
FT                   /translation="MKNFDKFSTNEEFSSVYKVGKKWHCEGVIIFYLNSYEKKIAVVAS
FT                   KKVGKAVVRNRSKRILRALFAKFERYLQDGKYIFVAKNEITELSFSRLEKNLKWGLKKL
FT                   ECFK"
FT   gene            complement(1020264..1020398)
FT                   /locus_tag="C1336_000250138"
FT                   /note="C1336_000250138 identified by Glimmer3 with a raw
FT                   score of 12.47."
FT   CDS             complement(1020264..1020398)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250138"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250138 identified by Glimmer3 with a raw
FT                   score of 12.47. Gene function extrapolated from C8J_0903
FT                   (CP000814.1) after blastn alignment (99.26 percent identity
FT                   over a 135 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30876.1"
FT                   /translation="MKRTYQPHGTPRKRTHGFRVRMKTKNGRKVINARRAKGRKRLAV"
FT   gene            1020529..1021008
FT                   /locus_tag="C1336_000250139"
FT                   /note="C1336_000250139 identified by Glimmer3 with a raw
FT                   score of 12.92."
FT   CDS             1020529..1021008
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250139"
FT                   /product="acetyltransferase, GNAT family"
FT                   /note="C1336_000250139 identified by Glimmer3 with a raw
FT                   score of 12.92. Gene function extrapolated from
FT                   CJJ81176_0985 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 134 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30877.1"
FT                   /translation="MSEFKIIDLRQEDLDILQEMIIEFAKYEDMLDFLQCTKEKLEHSL
FT                   LKNKFARAFLLKENEKTIGYMIYFYTFSSFWGSGGIYLEDIYIREDFRKKGYGKAVFKF
FT                   LGEICKKENLKRLDWVCLNDNILGINFYESLNAKHLKQWRNYRLSGENLEKLCDL"
FT   gene            1021005..1021589
FT                   /locus_tag="C1336_000250140"
FT                   /note="C1336_000250140 identified by Glimmer3 with a raw
FT                   score of 8.34."
FT   CDS             1021005..1021589
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250140"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250140 identified by Glimmer3 with a raw
FT                   score of 8.34. Gene function extrapolated from Cj0963
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 245 bp alignment). Similar to Cj0963."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30878.1"
FT                   /translation="MIRSLYYLKAMGFNFVDTHTNHFEQVQNFQELKQLVSSCTLCQFS
FT                   KTRKFSLMEPKIKNAKLLILDVFGQKSENESGILLNSKKGKKLKHYIYQILGLCDEDFY
FT                   FSYLFKCFCNGKFDDFSLQSCLPFFWNELKLIQPAFLLCLGEYTFKSLGFKDYHILKGE
FT                   VFAYKNFFIMPSYDLDFIEKIQVMKKISYKI"
FT   gene            1021646..1022797
FT                   /locus_tag="C1336_000250141"
FT                   /note="C1336_000250141 identified by Glimmer3 with a raw
FT                   score of 8.71."
FT   CDS             1021646..1022797
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250141"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250141 identified by Glimmer3 with a raw
FT                   score of 8.71. Gene function extrapolated from CJE1044
FT                   (CP000025.1) after blastn alignment (99.53 percent identity
FT                   over a 211 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30879.1"
FT                   /translation="MLNAKEQKLVDVKPVENFYPKLSVQECNTNCLFDLLESRLYLSFL
FT                   SEFADQNDQFLSNVYAKLLNSITDFEKNVQKITSVKLAIIIPEKTIKSYSNTIINSSIA
FT                   YLLRQRAEIKVKVFLTGTEDSDKIRAALDAAQAQGYQYAIAGFTLKGANELKNYSGNMK
FT                   IFIPTIHKNNIQFSNQNIIFGSIDYDAQIATLLRKSNANIAIFSDGSALSSNLNSRILA
FT                   QNNNARIYTIEGEKLDFSRLLRSQGGVNNASIFFNTPLIKTALASSQLRIYNIHPYVLL
FT                   STQINYNPTFLSLTQQGDRENFIIANSINNHDDNLVYLNEIFNQSIDYNWIAYATSIGV
FT                   DYFYTEFLNKKSESLFDEKIKNSQVDYKVRLMQGKQASFEELK"
FT   gene            complement(1022789..1023163)
FT                   /locus_tag="C1336_000250142"
FT                   /note="C1336_000250142 identified by Glimmer3 with a raw
FT                   score of 14.58."
FT   CDS             complement(1022789..1023163)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250142"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250142 identified by Glimmer3 with a raw
FT                   score of 14.58. Gene function extrapolated from C8J_0907
FT                   (CP000814.1) after blastn alignment (98.67 percent identity
FT                   over a 375 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30880.1"
FT                   /translation="MKMRVYYEDTDAGGVVYHSNYLKFCERARSEIFFNKKVDIFDASK
FT                   GHFLLAKANCNFLKPAKLGDTIEIKTKILEVKNASVEISQEIYKDEILLFKMELTLAFI
FT                   KNEKPARMDMQLKKLFEELF"
FT   gene            1023545..1023667
FT                   /locus_tag="C1336_000250143"
FT                   /note="C1336_000250143 identified by Glimmer3 with a raw
FT                   score of 2.07."
FT   CDS             1023545..1023667
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250143"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000250143 identified by Glimmer3 with a raw
FT                   score of 2.07. Gene function extrapolated from Cj0967
FT                   (AL111168.1) after blastn alignment (96.46 percent identity
FT                   over a 113 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30881.1"
FT                   /translation="MLLVTQANTTDNRNFNIPEYYFNDNKLYDKTNSTYKNPKV"
FT   gene            1024159..1024338
FT                   /locus_tag="C1336_000250144"
FT                   /note="C1336_000250144 identified by Glimmer3 with a raw
FT                   score of 7.54."
FT   CDS             1024159..1024338
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250144"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250144 identified by Glimmer3 with a raw
FT                   score of 7.54. Gene function extrapolated from
FT                   CJJ81176_1744 (CP000538.1) after blastn alignment (91.12
FT                   percent identity over a 169 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein,
FT                   degenerate' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30882.1"
FT                   /translation="MNLFILDNSKTISLVDPYGVRVYNNEDRDNTVVASFGLRMATPLK
FT                   DFYITPFYDIGYSW"
FT   gene            1024621..1025496
FT                   /locus_tag="C1336_000250145"
FT                   /note="C1336_000250145 identified by Glimmer3 with a raw
FT                   score of 13.25."
FT   CDS             1024621..1025496
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250145"
FT                   /product="methyltransferase, putative"
FT                   /note="C1336_000250145 identified by Glimmer3 with a raw
FT                   score of 13.25. Gene function extrapolated from C8J_0915
FT                   (CP000814.1) after blastn alignment (99.43 percent identity
FT                   over a 876 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30883.1"
FT                   /translation="MQENLLEKQFLNHPLYAKIQELKALNLACNFSLDDSVNLSTNSQA
FT                   KDEILAITKELKPWRKGPFKIDDLFINTEWQSFIKFNILKPFMNEISQKCVADIGCNNG
FT                   YYMFKMLEFNPAKLIGFDPSIKYRLQFELINALAKTPIEYELLGVEDLPSYGLKFDVIF
FT                   CLGVIYHRSDPIKMLKDLKAGLNKNGVVFLDTMYIEDEREIALVPNKTYSKIPNIYFVP
FT                   SISALKNWCERAGFKEFEILATKKTDENEQRKTEWIDSFSLENFLDPKDKNLTIEGYEA
FT                   PKRVYVRIGI"
FT   gene            1025568..1026146
FT                   /locus_tag="C1336_000250146"
FT                   /note="C1336_000250146 identified by Glimmer3 with a raw
FT                   score of 11.56."
FT   CDS             1025568..1026146
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250146"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250146 identified by Glimmer3 with a raw
FT                   score of 11.56. Gene function extrapolated from C8J_0916
FT                   (CP000814.1) after blastn alignment (99.47 percent identity
FT                   over a 567 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30884.1"
FT                   /translation="MAKKDNFEEYAQLEEYASAEDISRVRAELLTCPELNTSLAGTIIE
FT                   IDKNYAKSILITTSEMVADDQGLIFDAFIFAAANYVAQASINKEFSVIIGSKCFFYAPL
FT                   KLGDVLELEAHALFDETSKKRDVKVVGHVKEIKMFEGTIQVVSTDEHIFKLKRPPLNTV
FT                   KPTENQEQGAKINNPEAVAAALMTSVGGK"
FT   gene            complement(1026147..1026320)
FT                   /locus_tag="C1336_000250147"
FT                   /note="C1336_000250147 identified by Glimmer3 with a raw
FT                   score of 8.98."
FT   CDS             complement(1026147..1026320)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250147"
FT                   /product="putative lipoprotein"
FT                   /note="C1336_000250147 identified by Glimmer3 with a raw
FT                   score of 8.98. Gene function extrapolated from C8J_0917
FT                   (CP000814.1) after blastn alignment (98.28 percent identity
FT                   over a 174 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30885.1"
FT                   /translation="MKKYILMILLVLGISGCFVNERGISNRFYDDCKEYYDGSGTYHKD
FT                   CPKNWVDIKMTP"
FT   gene            complement(1026329..1026856)
FT                   /locus_tag="C1336_000250148"
FT                   /note="C1336_000250148 identified by Glimmer3 with a raw
FT                   score of 11.12."
FT   CDS             complement(1026329..1026856)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250148"
FT                   /product="thermonuclease family protein"
FT                   /note="C1336_000250148 identified by Glimmer3 with a raw
FT                   score of 11.12. Gene function extrapolated from C8J_0918
FT                   (CP000814.1) after blastn alignment (99.62 percent identity
FT                   over a 528 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30886.1"
FT                   /translation="MRINYKKLFNLRKLLSDPKKLFSVLIFTLVVVFIQNYIAQNSSFE
FT                   GKVVRIIDGDTIEVNHENKLARIRFFGIDAPELKQSFGKQSKEALSRILSGKQVEIIYK
FT                   NKDTYGRIVAIVKLNNVDINRFLVSKGYAWADTYYSNAYIKEQENAKKNHLGLWKEGNP
FT                   IEPYKWRKHNKF"
FT   gene            1026924..1028192
FT                   /locus_tag="C1336_000250149"
FT                   /note="C1336_000250149 identified by Glimmer3 with a raw
FT                   score of 13.72."
FT   CDS             1026924..1028192
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250149"
FT                   /product="aminoacyl-histidine dipeptidase"
FT                   /note="C1336_000250149 identified by Glimmer3 with a raw
FT                   score of 13.72. Gene function extrapolated from C8J_0919
FT                   (CP000814.1) after blastn alignment (98.98 percent identity
FT                   over a 1269 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30887.1"
FT                   /translation="MQNVIENFKQLCKIPHCSYETEQMKEFLSSYAKDKGFKVSVDKAG
FT                   NIHAIKGKPKICLQSHYDMVCMGDAPNLEVYEENGFLRAKNSSLGADNGIGIAIMMSAM
FT                   AEFENLECLFTNDEEVGLMGVNSLEHTLESKMLLNLDHESDDEIMIGCAGGVDIEASLP
FT                   FNTLRKKGKIYELCAQNFKGGHSGINIVRNEKSSIKEMAKFIQENKGEIISFEGGERIN
FT                   SIPKHAKALVHFKNEVKSNNWIKCDFKEEGEFEICDQSNKLLSLINSFTHGVRAYDENL
FT                   GIVQTSINLATLRMQDKQIKFALFARSNILDGLKQVEFETLEFFKAFDFKVRSFNFYPP
FT                   WEGKPNALSDMVFKALKKVSPNAKVSAIHAGLECGIIEKKQELLCASIGPNIHNPHSTD
FT                   EHCEIASVEKISKVVFEVLKDNA"
FT   gene            complement(1028175..1029422)
FT                   /locus_tag="C1336_000250150"
FT                   /note="C1336_000250150 identified by Glimmer3 with a raw
FT                   score of 15.19."
FT   CDS             complement(1028175..1029422)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250150"
FT                   /product="transmembrane transport protein"
FT                   /note="C1336_000250150 identified by Glimmer3 with a raw
FT                   score of 15.19. Gene function extrapolated from C8J_0920
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 138 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30888.1"
FT                   /translation="MQKKYKNIIYASLGGILEFYDFVLFAFFLDIFAKVFFPQNDAFWM
FT                   QINAYIAFGAAYLARPFGSIVMAHFADRYGRKNIFYISMLLMVLPSFALAFLPSYESIG
FT                   IFATLILFTIRILQGLAVGTEVSGAWIYVSEFVKGRQIPLALGFISATLTIGLLLGNIA
FT                   TLGIRSYFTPEEVQSYAWRIPFIIGGFFGILALFLRNKLSETPEFVKVQNEKKILSFPL
FT                   FEALKTHKMSMLVCFLMTMVLTSGVATLMILPKYFESLLAMSKTSALWVQNFAILAVIF
FT                   GALFQGFLASKWGSYRICSIFSIAFIIFGMLFSFYDEKFLFYFLLACFTQGIITFAPVF
FT                   MTQIFKSELKFSGLSFAYNISYAILGFLTPFVVNAFYKEYLGIYLAIVGSCSLFCVFLL
FT                   KRVFARSKIKELSIVF"
FT   gene            complement(1029463..1030302)
FT                   /locus_tag="C1336_000250151"
FT                   /note="C1336_000250151 identified by Glimmer3 with a raw
FT                   score of 16.50."
FT   CDS             complement(1029463..1030302)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250151"
FT                   /product="surface antigen, CjaA"
FT                   /note="C1336_000250151 identified by Glimmer3 with a raw
FT                   score of 16.50. Gene function extrapolated from C8J_0921
FT                   (CP000814.1) after blastn alignment (99.64 percent identity
FT                   over a 830 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30889.1"
FT                   /translation="MKKILLSVLTAFVVVVLAACGGNSDSKTLNSLDKIKQNGVIRIGV
FT                   FGDKPPFGYVDEKGNNQGYDIALAKRIAKELFGDENKVQFVLVEAANRVEFLKSNKVDI
FT                   ILANFTQTPQRAEQVDFCLPYMKVALGVAVPKDSNITSVEDLKDKTLLLNKGTTADAYF
FT                   TQNYPDIKTLKYDQNTETFAALMDKRGDALSHDNTLLFAWVKDHPDFKMAIKELGNKDV
FT                   IAPAVKKGDKELKEFIDNLIIKLGQEQFFHKAYDETLKAHFGDDVKADDVVIEGGKI"
FT   gene            1030521..1031639
FT                   /locus_tag="C1336_000250152"
FT                   /note="C1336_000250152 identified by Glimmer3 with a raw
FT                   score of 8.84."
FT   CDS             1030521..1031639
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250152"
FT                   /product="surface-exposed lipoprotein"
FT                   /note="C1336_000250152 identified by Glimmer3 with a raw
FT                   score of 8.84. Gene function extrapolated from
FT                   CJJ81176_1002 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 180 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30890.1"
FT                   /translation="MKKGIFLSIGIAVLFSACGNSIDEKTVKKYENQLNQTVKQEIVNL
FT                   SQDSGIKIEFSDFKCNADGDFIACLSSNFKTLAKDNNDEYQELFQAKNIKIRSNEIYKG
FT                   EANTSINIKEYYNDLFKNQKSIQSNLVFEDFKLGEKVVSDINASLFQQDPKISSFINKL
FT                   SSDSYTLSFDNSINKQENNYLDNLNIKFYNAKLNFNTNLNINLKEDLLNYLDSKGIKFN
FT                   TQTLAMDEQAINELLNMANYKQASDFSNTIQKYIILNNFKIDSTLKTEGVFSSYIATAK
FT                   ENLQTLKAQSQNEEQALIFDKALAILNNITQNDDYKLNLDLKFKNIPVSDYSTQGIDSI
FT                   EKLSINNQDATEALKIILPFIMFSMLMGGASF"
FT   gene            complement(1031716..1032861)
FT                   /locus_tag="C1336_000250153"
FT                   /note="C1336_000250153 identified by Glimmer3 with a raw
FT                   score of 10.07."
FT   CDS             complement(1031716..1032861)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250153"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250153 identified by Glimmer3 with a raw
FT                   score of 10.07. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30891.1"
FT                   /translation="MAIFALSILPYKAVYKTDRLVNFSPKNDSISLYNTLRTFSGYFFL
FT                   YLRMPQAPIPDYPEYTYDYKNVADRNVVLILGESTNANRIGLLGYERNTNPLLSEWAKN
FT                   DKNFVAKRAISSAVLTRVAVPSLLNIAYKPDNIKHILNEKTHLVYLAKKAGFKTFYYSS
FT                   QTISELSDISSENLDEFFTRENYYFEHKQLGDLLVLEKLKENQYKFLNGKNFVILHQRN
FT                   AHSPYQRGYRAYQKADVFKPMTRENTYDNAMIFNDYFISSVFEVFKELSQKSGIPTYVI
FT                   FIPDHAEAMGELGRDGHAEYGHSFLSANVANIPIFATTFNVKNDDFITYLKQSKLPTHY
FT                   ELAKLLAKEMGYDIHNSLEESNVFYIIMASIFLEMLVILKF"
FT   gene            complement(1032951..1033295)
FT                   /locus_tag="C1336_000250154"
FT                   /note="C1336_000250154 identified by Glimmer3 with a raw
FT                   score of 10.38."
FT   CDS             complement(1032951..1033295)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250154"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250154 identified by Glimmer3 with a raw
FT                   score of 10.38. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30892.1"
FT                   /translation="MKIFFRSYLFLAAITFIAFILPGFLFSLYNDYIFRFELNSVLALG
FT                   AAALIFPLVRPRIFIVCVFGLFALMECIQFSHLYYFNKPLNIFSLHLMFIEFGEVAKTA
FT                   LAGGGYYLKA"
FT   gene            1033420..1034160
FT                   /locus_tag="C1336_000250155"
FT                   /note="C1336_000250155 identified by Glimmer3 with a raw
FT                   score of 11.56."
FT   CDS             1033420..1034160
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250155"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250155 identified by Glimmer3 with a raw
FT                   score of 11.56. Gene function extrapolated from Cj0984
FT                   (AL111168.1) after blastn alignment (97.05 percent identity
FT                   over a 610 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein Cj0984' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30893.1"
FT                   /translation="MKILFSPSESKNANCVKNPINENSFIFKELFPYRMEALKHYEEFI
FT                   KNASLQNLQELFGIKNENEIDKFKHNLKQAPTQEAILLYTGVSYEYLNFKALDKKSQAY
FT                   ILENTLIFSNLFGVVRANDTLPFYKFKQGAKIGNFAIEKFYKEHFSKALDEYLENEEIL
FT                   DLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKELLAKL
FT                   PSNLKLKEIQIKGLKEEIVLEILD"
FT   gene            complement(1034164..1035315)
FT                   /locus_tag="C1336_000250156"
FT                   /note="C1336_000250156 identified by Glimmer3 with a raw
FT                   score of 12.97."
FT   CDS             complement(1034164..1035315)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250156"
FT                   /product="hippurate hydrolase"
FT                   /note="C1336_000250156 identified by Glimmer3 with a raw
FT                   score of 12.97. Gene function extrapolated from Cj0985c
FT                   (AL111168.1) after blastn alignment (99.26 percent identity
FT                   over a 270 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30894.1"
FT                   /translation="MNLIPEILDLQGEFEKIRHQIHENPELGFDELCTAKLVAQKLKEF
FT                   GYEVYEEIGKTGVVGVLKKGNSDKKIGLRADMDALPLQECTNLPYKSKKENVMHACGHD
FT                   GHTTSLLLAAKYLASQNFNGTLNLYFQPAEEGLGGAKAMIENGLFEKFDSDYVFGWHNM
FT                   PFGSDKKFYLKKGAMMASSDNYSIEVIGRGGHGSAPEKAKDPIYAASLLVVALQSIVSR
FT                   NVDPQNSAVVSIGAFNAGHAFNIIPDNATIKMSVRALDNETRKLTEEKIYKICKGITQA
FT                   NDIEIKINKNVVAPVTMNNDEAVDFASEVAKELFGEKNCEFNHRPLMASEDFGFFCEMK
FT                   KCAYAFLENENDIYLHNSSYVFNDKLLARAASYYAKLALKYLK"
FT   gene            complement(1035317..1036537)
FT                   /locus_tag="C1336_000250157"
FT                   /note="C1336_000250157 identified by Glimmer3 with a raw
FT                   score of 7.76."
FT   CDS             complement(1035317..1036537)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250157"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250157 identified by Glimmer3 with a raw
FT                   score of 7.76. Gene function extrapolated from C8J_0925
FT                   (CP000814.1) after blastn alignment (98.88 percent identity
FT                   over a 269 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30895.1"
FT                   /translation="MEKSLLFHFRRIGVEFIIFSVYAVFSISWAATGSLMPLISNDLAL
FT                   NTQQATLITSMIVVAKIFGASFTAFLVYKFGLKKGYFLGCILMSSGIFLSFVDSYSGIL
FT                   IIRFLTGLGSACALVCLVPIAQQWFEKKALHFVISFNMTSNLVGITLGLVLAESISNYF
FT                   GNWRDSLSFYAWINLILLILWLFVGKDENKKEEKKNNAKDLIYALKSRVTWGMIIFYIG
FT                   PILFLNSLFTFLPTFYAQYAGFSKELADFAKKEIPALANFAIIFGPYLGLFFKRKNISF
FT                   KIMLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGIFYSMWFPFFFNLPSELKNSNPNQ
FT                   TAYIMSAFWSITFVILSFNLWVVSWSVDKTHSFTLGFVYIFALIFISAILAQFVLPRRE
FT                   NFIQGEK"
FT   gene            1036769..1036975
FT                   /locus_tag="C1336_000250158"
FT                   /note="C1336_000250158 identified by Glimmer3 with a raw
FT                   score of 10.45."
FT   CDS             1036769..1036975
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250158"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250158 identified by Glimmer3 with a raw
FT                   score of 10.45. Gene function extrapolated from C8J_0926
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 103 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30896.1"
FT                   /translation="MEFLAFIFLIIIFLFVVFIIVTRYEKKIKLLNQNIQNMKEDIADL
FT                   KETTQKNRSLIEKNRSNIENIIK"
FT   gene            complement(1036978..1037737)
FT                   /locus_tag="C1336_000250329"
FT                   /note="Features C1336_000250159, C1336_000250160 joined to
FT                   form C1336_000250329 to correct 454 sequencing error
FT                   (C1336_000250159 identified by Glimmer3 with a raw score of
FT                   6.39, C1336_000250160 identified by Glimmer3 with a raw
FT                   score of 9.13)."
FT   CDS             complement(join(1036978..1037376,1037378..1037737))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250329"
FT                   /product="hypothetical protein"
FT                   /note="Features C1336_000250159, C1336_000250160 joined to
FT                   form C1336_000250329 to correct 454 sequencing error
FT                   (C1336_000250159 identified by Glimmer3 with a raw score of
FT                   6.39, C1336_000250160 identified by Glimmer3 with a raw
FT                   score of 9.13). Gene function extrapolated from CJE1070
FT                   (CP000025.1) after blastn alignment (98.88 percent identity
FT                   over a 268 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30897.1"
FT                   /translation="MMKIVFKGKSSEYEIQRSCFCVDAFVIKDKIEERDGVDFITSNIE
FT                   LLEFSDDSFTFEEIVKHFNICNSEDMIIVEDFDMKSNKDNQNQEDNIKHDILKSEKIIH
FT                   ENTKQISMQFKNLKFFSRIFKNENFLSDFKESKQEVVAIKKHEKLEIFKNLSQEDQEIS
FT                   FVKIEILNYDSNEDSLSFNLDIFPSGMSYKYGILKGSMHIILQGKTSSTMLFPFLKSMI
FT                   YKNKSENSSEKIFTLMINQKKHYKLIANLS"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1037737..1039002)
FT                   /locus_tag="C1336_000250161"
FT                   /note="C1336_000250161 identified by Glimmer3 with a raw
FT                   score of 9.94."
FT   CDS             complement(1037737..1039002)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250161"
FT                   /product="iron-sulfur cluster-binding domain protein"
FT                   /note="C1336_000250161 identified by Glimmer3 with a raw
FT                   score of 9.94. Gene function extrapolated from CJE1071
FT                   (CP000025.1) after blastn alignment (99.21 percent identity
FT                   over a 382 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30898.1"
FT                   /translation="MKFSQISDACVKCGKCIPVCTIHEENRDEITSPRGFLDLLSAYKE
FT                   GILELDKEAKKVFESCFLCTNCVEVCPSKLRVDNAIEEVRYDIAKKFGIAWYKKLIFFF
FT                   LRRRKILDLVAKLGYVFQSCAFKIQNENENTGMKARFSMPFVKKGRLLTSFNKKSFLNS
FT                   NPKFINNDGEKTIGFFVGCLANYFYIDTANAVLKITRELKINVDLMKEQVCCGAPQFFT
FT                   GDFKSVEVLAKKNIEYFEKKLEKLDAIIVPEATCSAMLKIDYEHFFIMQNDLDWAKRAK
FT                   CVSSKIYMASEYFYKFTSLEEILKTKNKFNYSITYHDPCHARKMQGVFKEPRELLKTNY
FT                   HFVEMSNSNTCCGFGGVSMQTDYYDKALSVGLKKAQMIDESKASVVSAECSACRMQISN
FT                   ALEQNSSKVVFASPLELIAKAL"
FT   gene            complement(1039004..1040359)
FT                   /locus_tag="C1336_000250162"
FT                   /note="C1336_000250162 identified by Glimmer3 with a raw
FT                   score of 12.30."
FT   CDS             complement(1039004..1040359)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250162"
FT                   /product="oxygen-independent coproporphyrinogen III
FT                   oxidase"
FT                   /note="C1336_000250162 identified by Glimmer3 with a raw
FT                   score of 12.30. Gene function extrapolated from C8J_0929
FT                   (CP000814.1) after blastn alignment (98.01 percent identity
FT                   over a 1356 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30899.1"
FT                   /translation="MRDYKAFVKYSKAGPRYTSYPTAVEFNANFKYEEYIEILKKQDRS
FT                   LSLYFHLPFCRSACYFCGCNVIYTAKEESKERYLTYIFKELDILSTILDTKREVVQMHF
FT                   GGGTPTFFSAKQLQNLILKIRSIFRNFSKDAEISCEIDPRFLNDEQATVLTQNGFNRIS
FT                   FGVQDFDEKVQKEIHRIQPFELTQNALNLVRSKGIKSVNMDLIYGLPYQNLQSFTQTLE
FT                   KVMLLNPDRLAIFNYAHVPWLKKNMRKFDENTLPSPDVKLEILEFCENFLSKNGYKMIG
FT                   MDHFAKENDELFKALENGTLHRNFQGYTTKGGADLVGVGLTSIGEGQRHYAQNFKDMSS
FT                   YEAALDRGVLPFERGVALSDDDELRKAVIMELMANFKLDIKSIEKEFCIDFQEYFKEDL
FT                   KALEEYKDFINFDENFIKVNETGVLLIRNIAMCFDAYMKNISEDKKVFSKTV"
FT   gene            complement(1040346..1040837)
FT                   /locus_tag="C1336_000250163"
FT                   /note="C1336_000250163 identified by Glimmer3 with a raw
FT                   score of 13.03."
FT   CDS             complement(1040346..1040837)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250163"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250163 identified by Glimmer3 with a raw
FT                   score of 13.03. Gene function extrapolated from Cj0993c
FT                   (AL111168.1) after blastn alignment (98.63 percent identity
FT                   over a 365 bp alignment). Similar to Cj0993c."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30900.1"
FT                   /translation="MKELEKYSICLKRIDEFSQNLGIKKKDRTIFKMKQSENENEKCLV
FT                   LENGSFDSPEPWFVIDENDEIHTLLSLQSLKNILESLKQSQKENFELRLEKAIYQQIPV
FT                   DFNDVWTVAMDEIKQKAQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNHNERL
FT                   "
FT   gene            complement(1040834..1041754)
FT                   /locus_tag="C1336_000250164"
FT                   /note="C1336_000250164 identified by Glimmer3 with a raw
FT                   score of 15.93."
FT   CDS             complement(1040834..1041754)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250164"
FT                   /product="ornithine carbamoyltransferase"
FT                   /note="C1336_000250164 identified by Glimmer3 with a raw
FT                   score of 15.93. Gene function extrapolated from
FT                   CJJ81176_1012 (CP000538.1) after blastn alignment (98.81
FT                   percent identity over a 921 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30901.1"
FT                   /translation="MKHFLTLRDFSKEEILSLVNHANELKKEPKKLLQDKTLAMIFEKN
FT                   STRTRMAFELAITELGGKALFLSSNDLQLSRGEPVKDTARVIGAMVDFVMMRVNKHETL
FT                   LEFARYSKAPVINALSELYHPTQVLGDLLTIKEWNKMQNGIAKVAFIGDSNNMCNSWLI
FT                   AAAILGFEFSIAIPKNYKISPEIWEFAMKQALISGAKISLSHDKFEALKDKDVVITDTW
FT                   VSMGEENEKERKIKEFEGFIIDEKAMSVANKDAILLHCLPAYRGYEVSEEIFEKHADVI
FT                   FEEARNRLYVVKALLCFLDNQRGRE"
FT   gene            complement(1041751..1042734)
FT                   /locus_tag="C1336_000250165"
FT                   /note="C1336_000250165 identified by Glimmer3 with a raw
FT                   score of 15.63."
FT   CDS             complement(1041751..1042734)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250165"
FT                   /product="porphobilinogen synthase"
FT                   /note="C1336_000250165 identified by Glimmer3 with a raw
FT                   score of 15.63. Gene function extrapolated from CJE1075
FT                   (CP000025.1) after blastn alignment (96.24 percent identity
FT                   over a 984 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30902.1"
FT                   /translation="MFKRFRRLRFNENLRSMVRENSLSVNDLIYPLFVVNGTRIKKEIS
FT                   SMPDVFQMSLDEILKECQNVVNLGIKAIILFGVLENEKKDSCGSDALDDEGLVARSIRE
FT                   IKKKFPDLFVISDLCFCEYTDHGHCGFIDPKTKSVDNDATLEISAKQALVHARAGVDMI
FT                   APSGMMDGIITTLREALDKEGFENLPIMAYSTKFASSYYGPFRDVAESAPSYGDRKSYQ
FT                   MDFANGKEALEESLEDETQGADILMVKPALAYLDVVKEISLHSNLPLCVYNVSGEYAML
FT                   KAAKNAGVIDYEKILYETMIAFKRAGAKLIITYHAKELAKMLKGEK"
FT   gene            1042792..1043352
FT                   /locus_tag="C1336_000250166"
FT                   /note="C1336_000250166 identified by Glimmer3 with a raw
FT                   score of 10.87."
FT   CDS             1042792..1043352
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250166"
FT                   /product="GTP cyclohydrolase II"
FT                   /note="C1336_000250166 identified by Glimmer3 with a raw
FT                   score of 10.87. Gene function extrapolated from
FT                   CJJ81176_1014 (CP000538.1) after blastn alignment (98.75
FT                   percent identity over a 561 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30903.1"
FT                   /translation="MKIKISEIANLPSKWGNFQIQSFKENDKEHLCIFKNTPKDTLNLR
FT                   IHSECLTGDALGSLKCDCGEQLEFSLKYIEKNGGMVIYLRQEGRGIGLFNKVNAYALQD
FT                   KGFDTIKANHQLGFKADERTYEIVEFILKHYEISKVNLLTNNPEKLDSIKEKIITRIPI
FT                   LIEPNRFNVEYLNIKQTQMGHLK"
FT   gene            1043353..1043919
FT                   /locus_tag="C1336_000250167"
FT                   /note="C1336_000250167 identified by Glimmer3 with a raw
FT                   score of 13.26."
FT   CDS             1043353..1043919
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250167"
FT                   /product="methyltransferase GidB"
FT                   /note="C1336_000250167 identified by Glimmer3 with a raw
FT                   score of 13.26. Gene function extrapolated from CJE1077
FT                   (CP000025.1) after blastn alignment (97.83 percent identity
FT                   over a 415 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30904.1"
FT                   /translation="MIFKDYDFLQNYDLKNFEEKVKIYKELLSKFNRIHNLTHLKNIDE
FT                   NIFDSIKILDFYDFSKAKNIADIGSGAGFPAVFLAFLLQSNFHLFEPNPKKAAFLRTLK
FT                   IECELSNLHIYKEKVQECKNTFKADIITSRSLMDVKPLLEICKNLKDENTIFILWKGSE
FT                   IYQELENIKNYEIFENNLRKYCILK"
FT   gene            complement(1043935..1044507)
FT                   /locus_tag="C1336_000250168"
FT                   /note="C1336_000250168 identified by Glimmer3 with a raw
FT                   score of 14.90."
FT   CDS             complement(1043935..1044507)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250168"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000250168 identified by Glimmer3 with a raw
FT                   score of 14.90. Gene function extrapolated from Cj0998c
FT                   (AL111168.1) after blastn alignment (92.82 percent identity
FT                   over a 557 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30905.1"
FT                   /translation="MKKIVLSILSSCLLASALSAVSFKEDSLKISFEGYKTKDMVGVEG
FT                   EFKNVEYKFSKNTKDFASYLKGAKATIKPSNAFMGEGNDVITNNITKVFFPALLGNADI
FT                   KVVFQDVIVGENKGVISAKITMDKKSTIVPLTYTIKDNKFEAKGQLDLHTFKNGSKALK
FT                   ALSDAAPGHGGISWPLVDISFNADLAE"
FT   gene            complement(1044599..1045696)
FT                   /locus_tag="C1336_000250169"
FT                   /note="C1336_000250169 identified by Glimmer3 with a raw
FT                   score of 16.24."
FT   CDS             complement(1044599..1045696)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250169"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000250169 identified by Glimmer3 with a raw
FT                   score of 16.24. Gene function extrapolated from C8J_0936
FT                   (CP000814.1) after blastn alignment (97.08 percent identity
FT                   over a 514 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30906.1"
FT                   /translation="MKTSFLAHSVAIVRSNFKGLLFTACIVIFAMYLSSVQSIKDTTHL
FT                   AATAFAIIIGVLLSPWFFKYQHHFQAGVHFSAKKLLRLGIVLYGFNITLTELLSVGLKG
FT                   FLLSAIVIFFVFIIALFVGMKIFKLDKETSMLVGAGSAICGAAAVLALESSLKSDPFKG
FT                   ILAVGTVVIFGLVFMFLYPIAFSLNLFPFFDQNAMGVFMGATLHEVANVAGAAEMAKDM
FT                   AGFEQGASNVAVIIKMMRVILLVPFLLIVTYFFAKNQHSSSGKTAKSITIPYFAFAFLG
FT                   MIVLNTYLASKENILGIATSDIISLGKTLCTLCIVFAMAALGLQIDFKKFLKSGSRVFG
FT                   LAFVLGLVLIFGGYFLTFTFKDILW"
FT   gene            1045808..1046659
FT                   /locus_tag="C1336_000250170"
FT                   /note="C1336_000250170 identified by Glimmer3 with a raw
FT                   score of 13.51."
FT   CDS             1045808..1046659
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250170"
FT                   /product="transcriptional regulator, LysR family"
FT                   /note="C1336_000250170 identified by Glimmer3 with a raw
FT                   score of 13.51. Gene function extrapolated from CJE1080
FT                   (CP000025.1) after blastn alignment (99.00 percent identity
FT                   over a 703 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30907.1"
FT                   /translation="MKIKDMEIFLDLLNTQSPTHTANNFSITQPNVSIVIKNLENKFDG
FT                   ILFERLGKKLLPTPKALELGKNWLKIIQAYYQSLEKLNDESMLLGEIKIASTQSISEHF
FT                   LAPILFDFKAEFKNIEIRSQTQNSKECLNLLKNGNIEFAIIEAELDPALVEYENLEINF
FT                   WQNDELIVATSDKKLNEKEFYIDELLEQKWILREVGSGLRDKFLNEIGASSKKLNIFLE
FT                   LDRMAAIKELVLQKKAISIFSKKSIEKELKNSTLYEIKLKNINLKRKFYTLKRKIIILT
FT                   EL"
FT   gene            1046768..1048636
FT                   /locus_tag="C1336_000250171"
FT                   /note="C1336_000250171 identified by Glimmer3 with a raw
FT                   score of 10.49."
FT   CDS             1046768..1048636
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250171"
FT                   /product="RNA polymerase sigma factor RpoD"
FT                   /note="C1336_000250171 identified by Glimmer3 with a raw
FT                   score of 10.49. Gene function extrapolated from CJE1081
FT                   (CP000025.1) after blastn alignment (99.43 percent identity
FT                   over a 174 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30908.1"
FT                   /translation="MNAKTQEAELEELFQENAKDYITYEKLVKYLTKQPSASTAKKVQA
FT                   LVKKHKVQLFSAAEIAQMKNIEDAKRLQEEKQKLQDTSLENEFDLANENDLLEWSRSDS
FT                   PVRMYLREMGQIALLNKDEEIEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPLINRE
FT                   RRVKELFKSFDDEEKSDDKLDELDIDEDEENETELETDEENTKKNSKKEDERTLKVIEK
FT                   FKALEKAKKDWLKTSKDKESGDELLDKLSIAFKKNILKEKLMDLGPTSKLISEIVKSME
FT                   TALKSDEEFDKELKRLEYRLPMFSDELKKRHADILKDITKLSKEEITERALETTMVSTY
FT                   MEIKKLFQTKEASEKSFDLEKSRLKEILEQIKRGKKISDEAKGRMAKSNLRLVVSIAKR
FT                   YTNRGLPFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAISRAIADQARTIRI
FT                   PIHMIETINQINKIIREHLQKDGKEPDVSVIAKEVGLSVDKVKQVIKITKEPISLEAPI
FT                   GNEDDGKFGDFVEDRNSLSPMDHILKDDLKEQIDEVLDQLNDREKAVIRMRFGLMDDES
FT                   DRTLEEIGKELNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEGWK"
FT   gene            complement(1048651..1049163)
FT                   /locus_tag="C1336_000250172"
FT                   /note="C1336_000250172 identified by Glimmer3 with a raw
FT                   score of 12.37."
FT   CDS             complement(1048651..1049163)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250172"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250172 identified by Glimmer3 with a raw
FT                   score of 12.37. Gene function extrapolated from C8J_0939
FT                   (CP000814.1) after blastn alignment (99.26 percent identity
FT                   over a 272 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30909.1"
FT                   /translation="MKKIYIIRHAKASKRGDIDDFERKLTKSGKEDLKKLFKNLALHEI
FT                   HPDLVLSSPAVRTAKTAKKIAKFYNFDKNKICFDERLYLCNVENLLKILQDIDDEFNEV
FT                   FLVGHNPGLMELGELLSSLCLASFPTSSILCLEFDIKEFKNLKKHSGKLVFFEHVRKLK
FT                   EEKDLGF"
FT   gene            complement(1049160..1049666)
FT                   /locus_tag="C1336_000250173"
FT                   /note="C1336_000250173 identified by Glimmer3 with a raw
FT                   score of 8.70."
FT   CDS             complement(1049160..1049666)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250173"
FT                   /product="rhomboid family protein"
FT                   /note="C1336_000250173 identified by Glimmer3 with a raw
FT                   score of 8.70. Gene function extrapolated from
FT                   JJD26997_0786 (CP000768.1) after blastn alignment (98.61
FT                   percent identity over a 216 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30910.1"
FT                   /translation="MLTIFLIFLNILCYFLISYDYYNILGLNILFFNGAYWQLLSSMFL
FT                   HGNLTHLILNMIVLLQFGRILETYLGALRFIFIYFIGGLLCSLLSVFYVKYFGENINVI
FT                   GASGAICVLIGFYAVLDKNSTKGLIVAILLMSFVPLLMGVNVAWYGHIFGFICGYILAK
FT                   IKEVK"
FT   gene            1049764..1050180
FT                   /locus_tag="C1336_000250174"
FT                   /note="C1336_000250174 identified by Glimmer3 with a raw
FT                   score of 10.87."
FT   CDS             1049764..1050180
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250174"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000250174 identified by Glimmer3 with a raw
FT                   score of 10.87. Gene function extrapolated from C8J_0941
FT                   (CP000814.1) after blastn alignment (97.60 percent identity
FT                   over a 417 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30911.1"
FT                   /translation="MKIKFLSIITILSLSLNADIIISADNLPSVSKEFLQHNFKAPIGI
FT                   VQKDKNSYEVYLSDGTELEFDIDGAWKEIENKAFPFELDFLPQNLANIIKNKFPNTKAR
FT                   EIERKINHYKIKFDNDVKILIDFNGTILHKEIDD"
FT   gene            complement(1050188..1051798)
FT                   /locus_tag="C1336_000250175"
FT                   /note="C1336_000250175 identified by Glimmer3 with a raw
FT                   score of 14.46."
FT   CDS             complement(1050188..1051798)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250175"
FT                   /product="putative membrane bound ATPase"
FT                   /note="C1336_000250175 identified by Glimmer3 with a raw
FT                   score of 14.46. Gene function extrapolated from Cj1005c
FT                   (AL111168.1) after blastn alignment (98.85 percent identity
FT                   over a 260 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30912.1"
FT                   /translation="MKNKKIILASFMVLCMLLGILYFKNEPKYIDENLYQSLLSQNLIQ
FT                   KAVIDKDEIWLKAEGENYVIIKDGIDIKTLLAKVPVEVKKDNTLWMFFILLVFIIALFI
FT                   SLGYFARKKELAKYPISNKNHTQAQNSNINLESSHIKPVISNITFNDVAGVDEVKMELS
FT                   ELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSGSSFVEI
FT                   YVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNVERDSTLNQLLTQMDGFE
FT                   DNSGVIVIAATNKIELMDSALLRSGRFDRRIFLSLPDFKDRLKILEIYMKDKNNNVNLN
FT                   KIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVLLGKKKILSFNDEE
FT                   KKIQATYQAAKALSAYYFDIGFDKITLIEDRFKEYEHNIRSKSELINRIKVYLAGSRAM
FT                   KLIYNESYTNSQDDFLKIKELLDYMLSFDMLEEPKLSKQKKEMDEFLNSMKDKILKLSE
FT                   LLLEKEKIEHDDVKNIMQI"
FT   gene            complement(1051802..1053052)
FT                   /locus_tag="C1336_000250176"
FT                   /note="C1336_000250176 identified by Glimmer3 with a raw
FT                   score of 13.07."
FT   CDS             complement(1051802..1053052)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250176"
FT                   /product="MiaB-like tRNA modifying enzyme"
FT                   /note="C1336_000250176 identified by Glimmer3 with a raw
FT                   score of 13.07. Gene function extrapolated from
FT                   CJJ81176_1024 (CP000538.1) after blastn alignment (97.64
FT                   percent identity over a 1230 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30913.1"
FT                   /translation="MKEKVFFKTFGCRTNIYDTELLKSYVKDYEIINDENKAQIIVVNS
FT                   CTVTNGADSGIKSYVNTMQKKGIKVILTGCGAVSKGKELLDKKQVFGVLGASNKDKINE
FT                   FLGAKTSFYELGNLNFIDKDIVCEYENHTKAFVKIQEGCDFACSYCIIPSVRGKSRSVD
FT                   EKALLKQVEILGANGYSEIVLTGTNIGSYGLKNGTSLGKLLRKMGQISGIKRIRLGSLE
FT                   PAQIDESFLEILDETWLERHLHIALQHTSEKMLRIMRRRSHTDNDLKLFNTIASKGYAL
FT                   GTDFIVAHPGESEELWQEALKKFKEFPLTHIHAFIFSPRNNTHSATMKDVINGTLAKER
FT                   LNTLKSIVEKNNYEFRKKNQVSLEVLIENQKDGFFEGYDQFFNKIKIKSDKDIAKEWIV
FT                   ISEYEVQEKSNFAILKG"
FT   gene            complement(1053049..1054620)
FT                   /locus_tag="C1336_000250177"
FT                   /note="C1336_000250177 identified by Glimmer3 with a raw
FT                   score of 11.61."
FT   CDS             complement(1053049..1054620)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250177"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250177 identified by Glimmer3 with a raw
FT                   score of 11.61. Gene function extrapolated from C8J_0944
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 91 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30914.1"
FT                   /translation="MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNIR
FT                   YENFIKYQDINDELIILNLNLKKTSDIHQQEELKRKIANLEEQLSLLKEYKDLNFAQSL
FT                   SAPDNIETLSKLTNPLAIIGAFSHIKKLKGEKEEYIFKFNDFKNLVDKIREKNSELKEL
FT                   VELKPSVENIEALKASDKKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQSLRA
FT                   VNILVAIVVVIAIAFMLKFIAKKYIKDSERYYTATKIINFININIIFLILLFAYIENIT
FT                   YLVTILGFASAGLAIAMKDMFMSMLGWCVIIFGGSFRVGDRVKVFQNNTTYIGDIIDIS
FT                   FLRITLYEELTLETYSKNRRSGRIIFIPNNYVFTNLLANYTHHGMKTVLDGIDISVTFD
FT                   SNLDKAQEIVENIVTRHAKGYTELARKNIARLQHEYSIKNPKVEPRFFMFFEHWGMRIS
FT                   AWYMTNAYAALVLRSTISKEIIKEFNKHKDIKIAYPSQNLYLGNLNQNHFEQYHENMHF
FT                   HARNKD"
FT   gene            complement(1054617..1055672)
FT                   /locus_tag="C1336_000250178"
FT                   /note="C1336_000250178 identified by Glimmer3 with a raw
FT                   score of 14.34."
FT   CDS             complement(1054617..1055672)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250178"
FT                   /product="3-dehydroquinate synthase"
FT                   /note="C1336_000250178 identified by Glimmer3 with a raw
FT                   score of 14.34. Gene function extrapolated from
FT                   CJJ81176_1026 (CP000538.1) after blastn alignment (97.44
FT                   percent identity over a 1056 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30915.1"
FT                   /translation="MQVEVKLKENAYKVYIDELEELKFDSKVFILSNPKISGLHLKTLL
FT                   SKIKAKEIFIATVKDGEEYKNLSTIEEILNQMFNSKLDRKSVLISFGGGVISDMGGFAA
FT                   SIYQRGIDFINIPTTLLACVDAAVGGKTGVNNNFGKNLIGTFYQPKAVYCESSFLKTLS
FT                   SRELAAGMAEFIKMATMFDDSILDFIEKIDEKSFLNATCENEIFTQIIARSIELKSRVV
FT                   EQDEKESGLRMLLNYGHTFAHVIENFTDYKFYLHGEAVAIGMVMANQLALNLGFLDKMQ
FT                   SQRIKDILLKFSLPISYKINNVDEFYEAFFMDKKSSNKKINFVLASPLGKGLIRSDISK
FT                   EDIIATLREFQ"
FT   gene            complement(1055718..1057118)
FT                   /locus_tag="C1336_000250179"
FT                   /note="C1336_000250179 identified by Glimmer3 with a raw
FT                   score of 11.71."
FT   CDS             complement(1055718..1057118)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250179"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250179 identified by Glimmer3 with a raw
FT                   score of 11.71. Gene function extrapolated from C8J_0946
FT                   (CP000814.1) after blastn alignment (99.88 percent identity
FT                   over a 826 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30916.1"
FT                   /translation="MNNILIIIDGILAKHFLERLCFEKGLGYFFTVVCQNSEKNNLNIS
FT                   SEYIDLHYFDPTSTARLENIMSKDFKQAFIYMQDEFETKKSYEALRSLNPNLEIEIMDF
FT                   WGLSVNDTHANLADARMTLSRRFMDFLPDIALTAQYIGLGVGEIMEVKIPAGSIFAYRH
FT                   ISSIQQKRWRIVLIYRNSKIYFVKPSFVLEPNDSILIVGDPVVLQSIFHNIRGKAGQFP
FT                   MPFGSNVFALIDMKNMNQNMQERVLDTTLKLTQKSNAKRFFIHVINPKLGVMYEKLKKL
FT                   SENKEGVFFDYFNTDFKQISTWLQNNDIGLVVTDIKNFEKEKQAFFDLKIPIMKVGEAS
FT                   FDELKEAIILSADESELENNANVIADLSKQLDFGVILYYYNPNSQNTTDMEEYFRSLSK
FT                   LYDKNIQIINKNDENPLLNLQYREDLLQFVSFQKELLNRDFGRNLSTNLNRHYYKMRQN
FT                   YQLFIPVE"
FT   gene            1057148..1058269
FT                   /locus_tag="C1336_000250180"
FT                   /note="C1336_000250180 identified by Glimmer3 with a raw
FT                   score of 12.13."
FT   CDS             1057148..1058269
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250180"
FT                   /product="queuine tRNA-ribosyltransferase"
FT                   /note="C1336_000250180 identified by Glimmer3 with a raw
FT                   score of 12.13. Gene function extrapolated from
FT                   CJJ81176_1028 (CP000538.1) after blastn alignment (97.77
FT                   percent identity over a 1122 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30917.1"
FT                   /translation="MEFKLKHKDGMARVCEITTAHSTFLTPVFMPVGTVGAVKSLDAND
FT                   IKNELDAKIILANTYHMYLRPTSKVVKDFGGLHGFTKFDRSFLTDSGGFQAFSLSKNSK
FT                   HFNEGIEFKSHIDGSRHLFTPKSVLDTQYDFNSDIMMILDDLVALPATKERVKISVDRT
FT                   IFWAKEAIAYHKSMQNKGIGIGQNIFGIIQGGTNYEERKRCALSLNEMPFDGLAIGGLS
FT                   VGEENALMYETVQNLNPYLDENRPRYLMGVGTPEDLVENVERGVDMFDCVMPTRNARNG
FT                   TFFTSFGKFNIKKAEFINDHEAIDPTCSCYTCRNFSRGYLNHLFKAKELTFFRLASLHN
FT                   LHYYLELARKMREAILNNSFTQFKRNFYHLRGK"
FT   gene            1058271..1059038
FT                   /locus_tag="C1336_000250181"
FT                   /note="C1336_000250181 identified by Glimmer3 with a raw
FT                   score of 11.37."
FT   CDS             1058271..1059038
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250181"
FT                   /product="putative CorA-like Mg2+ transporter protein"
FT                   /note="C1336_000250181 identified by Glimmer3 with a raw
FT                   score of 11.37. Gene function extrapolated from Cj1011
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 114 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30918.1"
FT                   /translation="MLELHENLKKILQAKNLETFYSEIYGQKIFVYVGLNLETWLFNDE
FT                   KIYKLQNEEFKLSSIEEFSNFIKSILEDFKVQNTHFQNLLEHKEGIILKGGFVKNFYKK
FT                   SFVLRQKINKNLKQINLLSEAFSLLLSEQAQYKKHLKILNLSIGILSKNTKEHLARVDT
FT                   LYALTSAIKNEKMNKSIYLLSILSSIFLPLNLIVGFFGMNTNNLFFKDSPYGTLYIFSL
FT                   ICCILIVGFIFYHSKKTKEFDLDEGKKAKKQTK"
FT   gene            1059091..1059167
FT                   /locus_tag="C1336_000250337"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            1059091..1059167
FT                   /locus_tag="C1336_000250337"
FT                   /product="tRNA-Arg"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(1059170..1059634)
FT                   /locus_tag="C1336_000250182"
FT                   /note="C1336_000250182 identified by Glimmer3 with a raw
FT                   score of 11.19."
FT   CDS             complement(1059170..1059634)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250182"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250182 identified by Glimmer3 with a raw
FT                   score of 11.19. Gene function extrapolated from
FT                   CJJ81176_1031 (CP000538.1) after blastn alignment (98.40
FT                   percent identity over a 312 bp alignment) - for clarity,
FT                   the original product name 'membrane protein, putative' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30919.1"
FT                   /translation="MSHIFLVIFCAALALLLFLGTIAYLIASDGKKTIKKQKTSQKQHV
FT                   AEKTKKFDTDLDKMIITASDVKLTDVELKELAKLYVQTHKLGSKTSKELDEATKKKLEF
FT                   VSALAANINASAQTVSYLNKELKKISGSYKKEIDAYEHMGLAKRKIKEDK"
FT   gene            complement(1059635..1062880)
FT                   /locus_tag="C1336_000250183"
FT                   /note="C1336_000250183 identified by Glimmer3 with a raw
FT                   score of 11.50."
FT   CDS             complement(1059635..1062880)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250183"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250183 identified by Glimmer3 with a raw
FT                   score of 11.50. Gene function extrapolated from C8J_0950
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 147 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30920.1"
FT                   /translation="MKNIIKSIGDLRVSVVLFLLFALFCALATFIESAYGTPTAWAMVY
FT                   DTFWFEYIQLLLGINLLCGMFRYKMFGLKKLPLMIFHISFLFILVGSAMTRYAGFEGIL
FT                   PIREHTQNSLIESSKTSLRISAIKDGERYSAVNDRYIGNLPFANSFKLKLNLGDDQAVL
FT                   KYKDLILNAHYTYKENNNSDPLLVLMLSQKGSQGVDVKFEKGEVKNIEGVNFAFMNDNV
FT                   KAPFVKIDENLTLSSSENLHFLSMLDGQNLDLKIGEKANAKERRLYEINDISFVVKAAS
FT                   LHAQEALEGSNRPQDESFWLWFKSAWLEVGRTMLISTFGEPQNWKNSLLLHFKDFALSN
FT                   ENKNLELTGSNALKLELSYKNESKEFYIFEYNKPIMIELAGQKFFISWALSYEQLPFDI
FT                   YLRDFVLDRYPGSMSPASYASEITVKNNNENFDYRIFMNNVLDYDGYRFYQSSYDQDEK
FT                   GTVLSVNKDPGKIPTYIGYFLLCLGMFMNFLNPHSRFRTLARLINKDTLKHTSVIIFIL
FT                   LLSFGSEKTFAQDLNSTLPVVNTNHAKALATLIVQKSADGRMVPFDTLSREILEKIHQS
FT                   DSYKGQNSNAVMLSMLVDVDKWQMEPFILMPQNQAVRDTIADILEIPSAKYISYKDFFD
FT                   ENNRYKLQKYVENANRKNPNARGVFDKEIIKLDERANVVNLVFSGELFKFIPIQNNPNN
FT                   VWLAPFSAVTTLKGDEGHIVLALIQNYFSAVENAFKDGNWTRADEGLKFIKEYQEKIGY
FT                   KVMPSKTKVEMEIFSNKAEIFVKLAPVYLIAGFLLLILVFSKMVVPNLKISFIFKVVYV
FT                   LNVLAFVIHTVGLGLRAYLSGHAPWSNGYESMVYIAWALSLSGIFFSRKSPIALSLTSI
FT                   LSGIVLMVAHLSEMNPQITNLVPVLNSYWLSIHVSVITASYGFLGLCALLGIFTLFLMC
FT                   FLKKDGKYNLNILRNITEATRINEMAMIFGLCLLTVGNFLGAIWANESWGRYWSWDSKE
FT                   TWALVSILVYAAILHLRMIPKYCNQFVFALWSMFAYWVIIMTYFGVNYFLTGLHSYAAG
FT                   EAAQIPNYVYWGFALMVVLALFARRKQNFVGKL"
FT   gene            complement(1062898..1063593)
FT                   /locus_tag="C1336_000250184"
FT                   /note="C1336_000250184 identified by Glimmer3 with a raw
FT                   score of 15.62."
FT   CDS             complement(1062898..1063593)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250184"
FT                   /product="high affinity branched-chain amino acid ABC
FT                   transporter, ATP-binding protein"
FT                   /note="C1336_000250184 identified by Glimmer3 with a raw
FT                   score of 15.62. Gene function extrapolated from CJE1158
FT                   (CP000025.1) after blastn alignment (99.28 percent identity
FT                   over a 696 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30921.1"
FT                   /translation="MLIVKDLHVYYGLIEAVKGIDFKVETGHIVSLIGSNGAGKTSTLN
FT                   ALLNSVKRTGEVNFLGYDTKRHLTHTLVQKGIALVPEGRRVFINLSVEENLKIGAFNNA
FT                   ENYEHLREQMYKLFPRLASKKHALAGTLSGGEAQMLAISRALMSEPKLLMLDEPSLGLA
FT                   PKIVGEVFDIIVRLKEEGITILLVEQNAYSALKISDYAYVLENGRIVMENEAKNLIGDD
FT                   EIRKKYLGL"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1063580..1064350)
FT                   /locus_tag="C1336_000250185"
FT                   /note="C1336_000250185 identified by Glimmer3 with a raw
FT                   score of 11.75."
FT   CDS             complement(1063580..1064350)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250185"
FT                   /product="high affinity branched-chain amino acid ABC
FT                   transporter, ATP-binding protein"
FT                   /note="C1336_000250185 identified by Glimmer3 with a raw
FT                   score of 11.75. Gene function extrapolated from
FT                   JJD26997_0773 (CP000768.1) after blastn alignment (98.31
FT                   percent identity over a 771 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30922.1"
FT                   /translation="MILELKQISKSFGSVRAINETSFKINEGEIFALIGPNGAGKTTLF
FT                   NIITGNYKPSSGSVEFLGERIDHLKPHKIVHLGIARTFQNIRLFSSMNVLENVLIGFNK
FT                   QMKYNIFEAFLHLGRFGKIEQVFKEKAYAILEELGIVEFAHEKAASLSYGQQRKVEIAR
FT                   AMATRPRLLLLDEPAAGMNSSESDELAELIFKLRKDYKISVLLIEHDMKFVNKLCDRVL
FT                   VLDYGKTIFEGKLCDAVNHKEVIAAYLGDFDANS"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1064347..1065399)
FT                   /locus_tag="C1336_000250186"
FT                   /note="C1336_000250186 identified by Glimmer3 with a raw
FT                   score of 11.23."
FT   CDS             complement(1064347..1065399)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250186"
FT                   /product="branched-chain amino acid transport system
FT                   permease protein"
FT                   /note="C1336_000250186 identified by Glimmer3 with a raw
FT                   score of 11.23. Gene function extrapolated from C8J_0953
FT                   (CP000814.1) after blastn alignment (97.74 percent identity
FT                   over a 972 bp alignment).; overlaps another CDS with the
FT                   same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30923.1"
FT                   /translation="MMVQIKVSHLIFLIASIIFIFISPYIFGDYGLNIVNQIAIFIILA
FT                   VSYNLINGVTGQFSLEPNGFVAIGAYAAALVLLSADAKNDQFFLDGPSSFILAIHSNSF
FT                   ILALIVAGICSSLLALILAFAVFRVRGDYLAIVTLGFGIIIKIAAINFPSITNGSRGLV
FT                   DIPQFSTIYWTGGIAIVAVILILNIVYSKYGRAMKAIRDDEDAASAMGINTFWIKTLAF
FT                   GTSAFLEGVGGGLLACLLTTVSPTQFDFLLTFQLLIIIVLGGLGSTTGAIIGAILVIGG
FT                   SEWLRFLDELNIKIDSLNLDIQSTPGLRMVVFSIVLILVMLFARKGIMGYYELSDVIRG
FT                   IKKRFKRSKK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1065399..1066295)
FT                   /locus_tag="C1336_000250187"
FT                   /note="C1336_000250187 identified by Glimmer3 with a raw
FT                   score of 11.08."
FT   CDS             complement(1065399..1066295)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250187"
FT                   /product="branched-chain amino acid transport system
FT                   permease protein"
FT                   /note="C1336_000250187 identified by Glimmer3 with a raw
FT                   score of 11.08. Gene function extrapolated from C8J_0954
FT                   (CP000814.1) after blastn alignment (98.46 percent identity
FT                   over a 779 bp alignment).; overlaps another CDS with the
FT                   same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30924.1"
FT                   /translation="MDSTLFLQQLVNGLSLGSMYALIAVGYTMVYGVLRLINFAHGDIM
FT                   MVGAYAALFCMTNLNVPFLGALSLAMIFAACVGIATDRIAYKPLRQAPRISLLITAIGI
FT                   SFFLQNLFNMLFTSTPRTFTPPSYFEESVNFGGVITTYGSLMVPALTFVILIAVLWILY
FT                   KSKYGIAIRALAFDIQTVNLMGIDANRIIAIVFALGSALAAVGGVFWAANYYSVEPTMG
FT                   TLIGLKAFAAAVLGGIGSVVGAVLGGLIIGFTEVVVVAFFPDLSGFKDAFAFIFLVFIL
FT                   LFRPTGILGINFEKSRF"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1066314..1068560)
FT                   /pseudo
FT                   /locus_tag="C1336_000250330"
FT                   /note="Features C1336_000250188, C1336_000250189 joined to
FT                   form C1336_000250330 to correct 454 sequencing error
FT                   (C1336_000250188 identified by Glimmer3 with a raw score of
FT                   12.76, C1336_000250189 identified by Glimmer3 with a raw
FT                   score of 13.44)."
FT   CDS             complement(join(1066314..1067423,1067445..1068560))
FT                   /pseudo
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250330"
FT                   /note="Features C1336_000250188, C1336_000250189 joined to
FT                   form C1336_000250330 to correct 454 sequencing error
FT                   (C1336_000250188 identified by Glimmer3 with a raw score of
FT                   12.76, C1336_000250189 identified by Glimmer3 with a raw
FT                   score of 13.44). Yet to account for left and right orfs in
FT                   same frame and so set to pseudogene."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1068591..1069025)
FT                   /locus_tag="C1336_000250190"
FT                   /note="C1336_000250190 identified by Glimmer3 with a raw
FT                   score of 10.09."
FT   CDS             complement(1068591..1069025)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250190"
FT                   /product="cytochrome c family protein"
FT                   /note="C1336_000250190 identified by Glimmer3 with a raw
FT                   score of 10.09. Gene function extrapolated from
FT                   CJJ81176_1039 (CP000538.1) after blastn alignment (99.31
FT                   percent identity over a 435 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30925.1"
FT                   /translation="MIIRWLFISSIFVVALFGINLKSFFTYTFDANKQYDMEKAKVLYF
FT                   QNKCNTCHGDNAEKSVIGSRILKDMSPEDIKGALIGYTLDSSSSTTASQMAFYARNLSH
FT                   EDIDNIIAYIKGGNFALDLQVKDLLEEEPAQKTKHNIFLK"
FT   gene            complement(1069034..1069225)
FT                   /locus_tag="C1336_000250191"
FT                   /note="C1336_000250191 identified by Glimmer3 with a raw
FT                   score of 7.96."
FT   CDS             complement(1069034..1069225)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250191"
FT                   /product="porin domain protein"
FT                   /note="C1336_000250191 identified by Glimmer3 with a raw
FT                   score of 7.96. Gene function extrapolated from
FT                   JJD26997_0767 (CP000768.1) after blastn alignment (100.00
FT                   percent identity over a 105 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30926.1"
FT                   /translation="MKKMFLIGMILNHFVFAAPLDEVFKDIEVSGTVRYRYDIKKEKKY
FT                   NKKTHRYQNKTQTEITIK"
FT   gene            complement(1069277..1069783)
FT                   /locus_tag="C1336_000250192"
FT                   /note="C1336_000250192 identified by Glimmer3 with a raw
FT                   score of 13.95."
FT   CDS             complement(1069277..1069783)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250192"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000250192 identified by Glimmer3 with a raw
FT                   score of 13.95. Gene function extrapolated from C8J_0959
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 88 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30927.1"
FT                   /translation="MLEKIFESLLVRSRIVTILPVIFGLIGAFVLFFIASYDVLKVIFY
FT                   TYNYFFDAGSNVDLHEDVVALIIGAVDLYLMALVLFIFSFGVYELFISEIEEFKQTKQS
FT                   KVLEVHSLDQLKDKLAKVIIMVLVVNFFQRVLQMKFATPVDMAFLAGSILALCVGLYFL
FT                   HKGGH"
FT   gene            complement(1069792..1070823)
FT                   /locus_tag="C1336_000250193"
FT                   /note="C1336_000250193 identified by Glimmer3 with a raw
FT                   score of 16.85."
FT   CDS             complement(1069792..1070823)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250193"
FT                   /product="aspartate-semialdehyde dehydrogenase"
FT                   /note="C1336_000250193 identified by Glimmer3 with a raw
FT                   score of 16.85. Gene function extrapolated from CJE1167
FT                   (CP000025.1) after blastn alignment (98.93 percent identity
FT                   over a 749 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30928.1"
FT                   /translation="MSKKQKIAIVGATGAVGEELLNVLDELDFPVESILPLASAKSVGS
FT                   EVEFKGKAYKVKELTENVFKENPIDIAFFSAGGSVSEKYAKFAVESGAVVIDNTSHFRM
FT                   EKDVPLVVPECNPEDIKDWKKTGIIANPNCSTIQMVQVLKPLNDAFNLKRVDVSTYQAA
FT                   SGAGKEGMQELVEAMQSFFAFKLDEFEPQTFPYTLALNLIPQIDVFMDNDYTKEELKMV
FT                   NETQKILHKNLEVSATCVRVPVLRSHSEAITMHFEKEIDVKKAKEILEKAPSVVVIDDP
FT                   KNKKYPMPLMTSDTNETYVGRIRADVYDKKTLHLWCVADQIRVGAATNAVRIAQKWLEF
FT                   KNK"
FT   gene            complement(1070823..1072124)
FT                   /locus_tag="C1336_000250194"
FT                   /note="C1336_000250194 identified by Glimmer3 with a raw
FT                   score of 15.46."
FT   CDS             complement(1070823..1072124)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250194"
FT                   /product="sigma-54 dependent DNA-binding response
FT                   regulator"
FT                   /note="C1336_000250194 identified by Glimmer3 with a raw
FT                   score of 15.46. Gene function extrapolated from C8J_0961
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 349 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30929.1"
FT                   /translation="MNLVIVEDDINMRKSLEIALAEYEEFNIKSYKSATEALKKIDENT
FT                   DLIITDINMPGIDGIEFVKACENKYDFIIMTGNATLSRAIEAVRLGVKDFLTKPFDVDT
FT                   LVEAIKRAKIIREKTADKKSKKNEKKEENKDFFSTSPNLEKTLNLSQKAAKTDASVMFF
FT                   GESGVGKEVFSRYIHTHSKRSNKPFVAINMAAIPANLIESELFGFEKGAFTDANATKIG
FT                   LFEMANEGTLFLDEIGEMPYEIQAKLLRALQEKEITRLGSTKSIKIDVRIISATNANLD
FT                   EKIKNGEFRSDLYYRLNTVPINIPPLRERKEEILGIAQKVLEDTCKEYDFKKKQLSQEA
FT                   KNALLEYDFPGNIRELISVVQRACILSEDDEISSEDLFLEARSIKKDVKNLEKELICEV
FT                   LLSVDYDKDQASQILGMDIKILNEKIKKYQIKDK"
FT   gene            complement(1072169..1072630)
FT                   /locus_tag="C1336_000250195"
FT                   /note="C1336_000250195 identified by Glimmer3 with a raw
FT                   score of 10.09."
FT   CDS             complement(1072169..1072630)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250195"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250195 identified by Glimmer3 with a raw
FT                   score of 10.09. Gene function extrapolated from C8J_0962
FT                   (CP000814.1) after blastn alignment (98.04 percent identity
FT                   over a 306 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30930.1"
FT                   /translation="MERIVCLLIFLSFKLFAQDEFIFWAELSSKNFILFHQNQNLSLAM
FT                   TQSENVEEQWVCEISYSDQDLKVLPRTSLGLIDDNMLKTIKFNFLNSHKDELSDCFIGA
FT                   KISVKDIVNTDLLRAQSETYIKILPLRFTVEFGEQNAIIYYLKKKQIQN"
FT   gene            complement(1072606..1073121)
FT                   /locus_tag="C1336_000250196"
FT                   /note="C1336_000250196 identified by Glimmer3 with a raw
FT                   score of 13.51."
FT   CDS             complement(1072606..1073121)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250196"
FT                   /product="lipoprotein, putative"
FT                   /note="C1336_000250196 identified by Glimmer3 with a raw
FT                   score of 13.51. Gene function extrapolated from
FT                   CJJ81176_1045 (CP000538.1) after blastn alignment (99.41
FT                   percent identity over a 506 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30931.1"
FT                   /translation="MKKIYFMLAIAGIFAGCVPSANSATKNSSANSTAPSQDVIVQKVD
FT                   KDDVRDIIREEKMLAPDASETELSFTAVGEGIAPMNTVSTAQALALAKRAAITDAYRQL
FT                   ASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDENFNQGLYRVNLELKIDAD
FT                   KWKELFAY"
FT   gene            complement(1073185..1075776)
FT                   /locus_tag="C1336_000250197"
FT                   /note="C1336_000250197 identified by Glimmer3 with a raw
FT                   score of 10.46."
FT   CDS             complement(1073185..1075776)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250197"
FT                   /product="DNA gyrase subunit A"
FT                   /note="C1336_000250197 identified by Glimmer3 with a raw
FT                   score of 10.46. Gene function extrapolated from C8J_0964
FT                   (CP000814.1) after blastn alignment (99.68 percent identity
FT                   over a 628 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30932.1"
FT                   /translation="MENIFSKDSDIELVDIENSIKSSYLDYSMSVIIGRALPDARDGLK
FT                   PVHRRILYAMQNDEAKSRTDFVKSARIVGAVIGRYHPHGDTAVYDALVRMAQDFSMRYP
FT                   SITGQGNFGSIDGDSAAAMRYTEAKMSKLSHELLKDIDKDTVDFVPNYDGSESEPDVLP
FT                   SRVPNLLLNGSSGIAVGMATNIPPHSLNELIDGLLYLLDNKDASLEEIMQFIKGPDFPT
FT                   GGIIYGKKGIIEAYRTGRGRVKVRAKTHIEKKTNKDVIVIDELPYQTNKARLIEQIAEL
FT                   VKEKQIEGISEVRDESNKEGIRVVIELKREAMSEIVLNNLFKSTTMESTFGVIMLAIHN
FT                   KEPKIFSLLELLNLFLTHRKTVIIRRTIFELQKARARAHILEGLKIALDNIDEVIALIK
FT                   NSSDNNTARDSLVAKFGLSELQANAILDMKLGRLTGLEREKIENELAELMKEIARLEEI
FT                   LKSETLLENLIRDELKEIRSKFDVPRITQIEDDYDDIDIEDLIPNENMVVTITHRGYIK
FT                   RVPSKQYEKQKRGGKGKLAVTTYDDDFIESFFTANTHDTLMFVTDRGQLYWLKVYKIPE
FT                   GSRTAKGKAVVNLINLQAEEKIMAIIPTTDFDESKSLCFFTKNGIVKRTNLSEYQNIRS
FT                   VGVRAINLDENDELVTAIIVQRDEDEIFVSGGEENLENQEIENLDDENLENEESVSTQG
FT                   KMLFAVTKKGMCIKFPLAKVREIGRVSRGVTAIKFKEKNDELVGAVVIENDEQEILSIS
FT                   AKGIGKRTNAGEYRLQSRGGKGVICMKLTEKTKDLISVVIVDETMDLMALTSSGKMIRV
FT                   DMQSIRKAGRNTSGVIVVNVENDEVVSIAKCPKEENDEDELSDENFGLDLQ"
FT   gene            complement(1075817..1076392)
FT                   /locus_tag="C1336_000250198"
FT                   /note="C1336_000250198 identified by Glimmer3 with a raw
FT                   score of 9.77."
FT   CDS             complement(1075817..1076392)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250198"
FT                   /product="transformation system protein"
FT                   /note="C1336_000250198 identified by Glimmer3 with a raw
FT                   score of 9.77. Gene function extrapolated from
FT                   JJD26997_0760 (CP000768.1) after blastn alignment (98.96
FT                   percent identity over a 576 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30933.1"
FT                   /translation="MRCINCGAFALLCFCDLCELELSEFSLNARKLDNNFKVYSFYKYH
FT                   EIQHLLHSKHYFYGYFVYKMLAKLSFAKFKDFFDPRMTINVIALDDKVEDMLYSHSAIL
FT                   ARYLKTKFVKPVFNVLKAQNHIKYSGKSLEFRQKHKRNYKLLKTIHEPVILVDDIVTTG
FT                   SSLLEAKKVLEENKISVLFALVLADAKV"
FT   gene            complement(1076389..1077033)
FT                   /locus_tag="C1336_000250199"
FT                   /note="C1336_000250199 identified by Glimmer3 with a raw
FT                   score of 11.01."
FT   CDS             complement(1076389..1077033)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250199"
FT                   /product="membrane liproprotein MapA"
FT                   /note="C1336_000250199 identified by Glimmer3 with a raw
FT                   score of 11.01. Gene function extrapolated from
FT                   JJD26997_0759 (CP000768.1) after blastn alignment (97.65
FT                   percent identity over a 597 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30934.1"
FT                   /translation="MFKKFLIFIVPILFLSACATKQDTFAQVNQISRNSQCSSCESPDG
FT                   FEAKIKGLLYISDVGIQCCANKRTLDTGIALKKVYLHRFYDLKEGQKVLNAKGKKLFVD
FT                   VNFNAVFYTYLKQELEARGIVVLDNNDQNSPYVSKIDLEFISYGATQDTTGLHSKLVGV
FT                   LQVSDINKNKKFTIRTKQDVQGFDDLKETTFYTHLLIKQMANKAASLISEL"
FT   gene            complement(1077110..1078906)
FT                   /locus_tag="C1336_000250200"
FT                   /note="C1336_000250200 identified by Glimmer3 with a raw
FT                   score of 14.07."
FT   CDS             complement(1077110..1078906)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250200"
FT                   /product="GTP-binding protein LepA"
FT                   /note="C1336_000250200 identified by Glimmer3 with a raw
FT                   score of 14.07. Gene function extrapolated from
FT                   CJJ81176_1049 (CP000538.1) after blastn alignment (96.50
FT                   percent identity over a 1686 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30935.1"
FT                   /translation="MSVKNIRNFSIIAHIDHGKSTLADRIISECGAISDRQMSSQVMDT
FT                   MDIEKERGITIKAQSVRLNYKFNNENFVLNLIDTPGHVDFSYEVSRSLASCEGALLVVD
FT                   ASQGVEAQTIANVYIALENNLEIIPVINKIDLPNADIEKVKHEIEHIIGIDCKDAICVS
FT                   AKTGVGIKELIETIITKIPVPKTDDKAPTKALIYDSWFDNYLGALALVRIYEGSIAKND
FT                   EVLVMSTDKKHIVQDLFYPHPLSPIKTQSLQSGEVGVVVLGLKTVGDVQVGDTITLVKN
FT                   KAKEAIGGFEKAKAFVFAGLYPIETDKFEDLRDALDKLKLNDSSITYEPETSLALGFGF
FT                   RVGFLGLLHMEVIKERLEREFNLDLIATAPTVTYEIYQTDGELVKIQNPSELPPVNKID
FT                   HIKEPYVKATIITPSEFLGNLITLLNRKRGIQVKMDYITPERVLLEYDVPLNEIVMDFY
FT                   DKLKSLTKGYASFDYEPIEFRVGDLVKLDIKVAGENVDALSIIVPNEKAQSKGRELVSA
FT                   MKEIVPRQLFEVAIQASIGNKIIARETVKSMGKNVTAKCYGGDITRKRKLLEKQKEGKK
FT                   RMKAIGKVNLPQEAFLSVLKID"
FT   gene            1079032..1080306
FT                   /locus_tag="C1336_000250201"
FT                   /note="C1336_000250201 identified by Glimmer3 with a raw
FT                   score of 14.25."
FT   CDS             1079032..1080306
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250201"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250201 identified by Glimmer3 with a raw
FT                   score of 14.25. Gene function extrapolated from
FT                   CJJ81176_1050 (CP000538.1) after blastn alignment (99.09
FT                   percent identity over a 219 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30936.1"
FT                   /translation="MFEKYLKSAIFLALYPLAMLASNLHEFITLSQNNESYLIKQMQSE
FT                   QANLDKEQAFRNYLPSLSLNSAYIANNKDRFIIDPQESLFAKVSLNFLLFDGSAREANL
FT                   RALESKEKLSLLDKEQSKNYLALNAITLYFNTLSLEKILLANQQKVAFLKSTFERLQKF
FT                   YDAGLSPKDELESIKAKYHLSLLELSQNELKLANIQKEIKILSNTDFKVQGNAFLENPQ
FT                   QEKSQNYEVMIAKEQINLAKESVNLAKAEYFPKFYIQDNFNFYKNNYNPKVPAPFANLA
FT                   DQFLEKYSQGNQFILGMEWKIFDFNARAKEVEKERLNVQIANANARFSERKNKEELNYL
FT                   DKSLKVLQEQILALNLSLNAANLAFESVDKKYQAGLVSYVEYLQALEAKFKAQSDLELA
FT                   KNEFEITKANYYFNAGIDLNSKVKE"
FT   gene            1080303..1081043
FT                   /locus_tag="C1336_000250202"
FT                   /note="C1336_000250202 identified by Glimmer3 with a raw
FT                   score of 15.22."
FT   CDS             1080303..1081043
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250202"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250202 identified by Glimmer3 with a raw
FT                   score of 15.22. Gene function extrapolated from
FT                   JJD26997_0750 (CP000768.1) after blastn alignment (98.35
FT                   percent identity over a 243 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30937.1"
FT                   /translation="MKKILFLLLAFNCAFGEEIYASFNVEASKQSKLALESIGLVQKIP
FT                   VEIGQKVSKGELLLALDQESEKIALQNAQNSYQLALVEYENTKSKMQKIKAVENVIDKQ
FT                   SYEDMKAKFDAANLNLNKAKINIAYYKNIMTKKELRAPYDAIIANKFIQVGEGVGGVAQ
FT                   PLIEIFSYPQSKLILSFDEKYKDKVKLGDDFFYKIDQNGTEFKGKISLIYPSIEVKTRK
FT                   IYAEVQTTNLTPGLFGEGRIITKD"
FT   gene            1081085..1084063
FT                   /locus_tag="C1336_000250203"
FT                   /note="C1336_000250203 identified by Glimmer3 with a raw
FT                   score of 11.36."
FT   CDS             1081085..1084063
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250203"
FT                   /product="putative integral membrane component of efflux
FT                   system"
FT                   /note="C1336_000250203 identified by Glimmer3 with a raw
FT                   score of 11.36. Gene function extrapolated from C8J_0970
FT                   (CP000814.1) after blastn alignment (99.40 percent identity
FT                   over a 166 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30938.1"
FT                   /translation="MFFLALMIFGLISAFSMSVNLFPNVSIPLIKITSKVNGDLNFVES
FT                   KITKEIENALSEIDGVKTITSAAYDNFSVSVVEFKLGKNLEVAANDVRDKIGTLSLPSK
FT                   PEIEKISSDSGSAISLFLYSKDKLQLMREINDKIKPFLQRVEGVGKIEAKGFLEPQIRI
FT                   ELKPNELRKYNLNALDVANIIKSQNFKQALGELNNNQDNYIIKGYFEATNLEELSNLRI
FT                   KTGVFLSDIANISSLYEDEKQSALYEGKEGVLLELGKITNYNTLEMIKNVKNALPILEK
FT                   QIPKDISINVLYDKSLNIHKHLSQVIFDMVLGIFLTLVIVFLFLRNLSATLIACIAIPT
FT                   SIISTFFIIDLLGYDLNRLTFIALTLSIGIFIDDAIVVIENIAKKLKTYPPLQAAFLGI
FT                   NEIGFSVLSISIVLLCVFIPISYMNSIPGLFFNALGISVASGIVISFLVSVFLIPSIGA
FT                   RFLNPKESKFYEKTEVFFEKIEQKYENLLYKILQNKAKFILATLVFVGLSFALATRIGL
FT                   DFLPMEDDSEIQVLLESKKDLSLEAMKEKSLNLLEKIKNDSNVKYAFLLVGYDDAKDAT
FT                   KAKIYVKLKNLDERNLRQSAIVSLYRQKFQDESLKIKILELPKIEGAGIDDPVQFLILG
FT                   DDLNTLKEAASRAKEILGTNARIVDISDNANATKDEVALRINKEKAKLLDVNPEYIAGV
FT                   LGYSFSQLSVGSMDRGNSKDDIILSFAPEFKKNIEALKRISIKNNQGVNLELSSVVDFI
FT                   YSKDLKTINRYNKNRSVKITAGVNDLSLGAVQKLLLDNMDKILNNNASLSYAFSGFINL
FT                   LGETVQGFAMAVVLAFVLIYLVLAALYESFILPLIIMITMPLAFGGASIGLFITGHNFS
FT                   LFVLIAIILLFGMVGKNAILLVDVANKKCHEGLDPDKALLIAGKSRLRAILMTTFAMIF
FT                   AMLPLALSRGAGYEANSPMAIAIIFGLISSTLLTLLVVPALFKFCFKLDSKLRKIYERE
FT                   KLN"
FT   gene            complement(1084086..1084892)
FT                   /locus_tag="C1336_000250204"
FT                   /note="C1336_000250204 identified by Glimmer3 with a raw
FT                   score of 11.02."
FT   CDS             complement(1084086..1084892)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250204"
FT                   /product="DnaJ domain protein"
FT                   /note="C1336_000250204 identified by Glimmer3 with a raw
FT                   score of 11.02. Gene function extrapolated from
FT                   CJJ81176_1053 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 121 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30939.1"
FT                   /translation="MQIVQTLETINVNTDDISVFQYFKDLITKNFTKVIGRKNKIFSFF
FT                   EENEIPQRRYFLKVLDQKYRKSTNEGIENLQDAHFKTFRLNFEQNNMLKPMLFIKIDFA
FT                   AGRILMKLSSNEKLFVTYIRNYFQDHNIEYNEMTNILILEYKNENTLELFEAFADESEH
FT                   LKYCVNFEVDREEYKKFRQNIHNKENMKWKFNALAKLFSNYFNTLECTPQNDLSEIRQK
FT                   YLILVKLYHPDFHQGKSAIEKAYAREQFEKIQIAYDNLKALYKNNT"
FT   gene            complement(1084893..1085612)
FT                   /locus_tag="C1336_000250205"
FT                   /note="C1336_000250205 identified by Glimmer3 with a raw
FT                   score of 9.16."
FT   CDS             complement(1084893..1085612)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250205"
FT                   /product="possible transferase"
FT                   /note="C1336_000250205 identified by Glimmer3 with a raw
FT                   score of 9.16. Gene function extrapolated from C8J_0972
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 166 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30940.1"
FT                   /translation="MLEIGFCTLEDQCPYLKDKRSRIEYKYIENCPKEINNELIKRGWR
FT                   RFGRYFSRPICKDCDECLSLRILVNEYNFSRSERRVINKNINTKVMLRTPNLSNEHLFL
FT                   YDKYHRFMEEKKNWKRYDLSFKQYYNLYVDGFMNFGYELAFYIEDKLVCVDLIDILEDG
FT                   ISSIYCFYDPDFSYFSLGKFSLLNEIQIAKKMNLDYIYLGYFVKKCQSLSYKADYTPNE
FT                   ILKGTKELFENEVLWEK"
FT   gene            complement(1085612..1085863)
FT                   /locus_tag="C1336_000250206"
FT                   /note="C1336_000250206 identified by Glimmer3 with a raw
FT                   score of 9.78."
FT   CDS             complement(1085612..1085863)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250206"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250206 identified by Glimmer3 with a raw
FT                   score of 9.78. Gene function extrapolated from Cj1036c
FT                   (AL111168.1) after blastn alignment (98.81 percent identity
FT                   over a 252 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein Cj1036c' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30941.1"
FT                   /translation="MDFLDSLKSIKKEMQANTNTPKLAKKSSKSGASVKNLEKLAKDIR
FT                   EKNQETNIDKEMQEIFLKQEKLQDEFSEFIKNADIKKI"
FT   gene            complement(1085867..1087312)
FT                   /locus_tag="C1336_000250207"
FT                   /note="C1336_000250207 identified by Glimmer3 with a raw
FT                   score of 12.11."
FT   CDS             complement(1085867..1087312)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250207"
FT                   /product="acetyl-CoA carboxylase, biotin carboxylase"
FT                   /note="C1336_000250207 identified by Glimmer3 with a raw
FT                   score of 12.11. Gene function extrapolated from CJE1181
FT                   (CP000025.1) after blastn alignment (98.96 percent identity
FT                   over a 1446 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30942.1"
FT                   /translation="MNQIHKILIANRAEIAVRVIRACRDLHIKSVAVFTEPDRECLHVK
FT                   IADEAYRIGTDAIRGYLDVARIVEIAKACGADAIHPGYGFLSENYEFAKACEDAGIIFI
FT                   GPKSEVIHKMGNKNIARKLMAKNGIPIVPGTEKLNSYSMEEIKIFAEKIGYPVILKASG
FT                   GGGGRGIRVVHKEQDLENAFESCKREALTYFNNDEVFMEKYVVNPRHIEFQILGDNYGN
FT                   IIHLCERDCSIQRRHQKVIEIAPCPGISDNLRKTMGVTAVAAAKAVGYTNAGTIEFLLD
FT                   DYNRFYFMEMNTRIQVEHPITEEITGIDLIVRQIRIAAGEILDLEQSDIKPRGFAIEAR
FT                   ITAENVWKNFIPSPGKIGEYYPALGPSVRVDSHIYKDYTVPPYYDSMLAKLIIKATSYD
FT                   LAVNKLERALKEFVIDDIRTTIPFLIAITKTREFRRGYLDTSFIETHMQELLEKTEDRH
FT                   QENKEEVIAAIAATLKKIRESRE"
FT   gene            1087452..1088615
FT                   /locus_tag="C1336_000250208"
FT                   /note="C1336_000250208 identified by Glimmer3 with a raw
FT                   score of 9.97."
FT   CDS             1087452..1088615
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250208"
FT                   /product="probable cell division/peptidoglycan biosynthesis
FT                   protein"
FT                   /note="C1336_000250208 identified by Glimmer3 with a raw
FT                   score of 9.97. Gene function extrapolated from C8J_0975
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 204 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30943.1"
FT                   /translation="MVADKRLFYLSCILITIGIVFSYSLTAFTVLFLDYSEFHFFIRQL
FT                   FFGISGILIMFFISRLDPDKALSKKIILAILIISFIFIIILPFLPSALATASGGAKRWI
FT                   RLGPLSISPVEFFKIGLIYFLAWSYTRRIDDSKKAIRHEALILLPYCILASIVIGYIYI
FT                   TQNDLGQSIISFFLILALAFFAGASKRLFAFGTLIIMMIGIMVISSNQRRIQRIASWWG
FT                   NIQDAFLPMLPDWLANALRVSSNSEPYQISHSLNAIAHGGMFGEGLGLGTFKLGFLSEV
FT                   HTDFILSGITEEIGLLGLGVICYIYLWMILRIFRIAGRCEAKQDFIFCSGIALLLLFSF
FT                   FMNAFGIISLTPLKGVAVPLLSYGGSSMWAICIGIGYVLMISKKVKL"
FT   gene            1088612..1089640
FT                   /locus_tag="C1336_000250209"
FT                   /note="C1336_000250209 identified by Glimmer3 with a raw
FT                   score of 11.21."
FT   CDS             1088612..1089640
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250209"
FT                   /product="UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
FT                   pyrophosphoryl-undecaprenol N-acetylglucosamine
FT                   transferase"
FT                   /note="C1336_000250209 identified by Glimmer3 with a raw
FT                   score of 11.21. Gene function extrapolated from
FT                   JJD26997_0743 (CP000768.1) after blastn alignment (97.12
FT                   percent identity over a 313 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30944.1"
FT                   /translation="MTIALTGGGTGGHLAIVRCLLESAIKKNIECVYIGSQNGQDKAWF
FT                   ENEVRFKEKFFLSSKGVVNQSKFGKISSLLHTLKLSKDCREIFKKYHIQAVFSVGGYSA
FT                   APASFAALFSHLPLFIHEQNSKSGSLNMLLKPFATKFFSAFEKEFSPYPVANKFFDNAR
FT                   IRKELKNIIFLGGSQGASFINELALNLAPKLQEQNIKIIHQCGKNDFEKCKKHYQSLNI
FT                   QADVFDFSSNLEEKMKNADLAISRAGASTLFELCANTLPAIFIPYPHAAKNHQYFNAKF
FT                   LQDQALCQIFTQDSINLDDFFKAMLKLNLEDISTRLQNIAQKNGGDILLEKALSDNLAF
FT                   IR"
FT   gene            complement(1089611..1090774)
FT                   /locus_tag="C1336_000250210"
FT                   /note="C1336_000250210 identified by Glimmer3 with a raw
FT                   score of 12.64."
FT   CDS             complement(1089611..1090774)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250210"
FT                   /product="putative transmembrane transport protein"
FT                   /note="C1336_000250210 identified by Glimmer3 with a raw
FT                   score of 12.64. Gene function extrapolated from C8J_0977
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 181 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30945.1"
FT                   /translation="MASFKKIFWINVIIVIIVAFNLRAPITAVGPIIDIIKDKYYLNST
FT                   VAGILTSLPLIAFGSISFIVGYFSPIRAIVFGIFLIFLGEIIRSYFGVYGLFLGMLAMG
FT                   CGIAIANVLLPSFIKEKFPRKMASIMGIYSLVLSISSIMGIALAIPLLSVFDLAGAMFF
FT                   WAIFSFVALVVYYPQAKNGRFFRIKKKAYKKINLFTNLTTWKITLFMGFQSFLAYSLFF
FT                   WYVQIVVEKGFDKEFATNMVLFAQLVAAPVSLFGPLLLGKLRQNLHTFYIASLCSMYVI
FT                   AFGMLFIFDSKISIIISAFIMGFPWGGVFGIALLFIAQKSSNAQIAARLSALAQGFGYL
FT                   IAAQGQWIIGFLHDKFENFSLAILMLIFVGILVNIFGYLSYKSQVIR"
FT   gene            complement(1090782..1091633)
FT                   /locus_tag="C1336_000250211"
FT                   /note="C1336_000250211 identified by Glimmer3 with a raw
FT                   score of 13.00."
FT   CDS             complement(1090782..1091633)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250211"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250211 identified by Glimmer3 with a raw
FT                   score of 13.00. Gene function extrapolated from
FT                   CJJ81176_1062 (CP000538.1) after blastn alignment (99.41
FT                   percent identity over a 852 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30946.1"
FT                   /translation="MKKYVLSLALLGSLLGASELKYQEFDGFKSPESIFVDKNYVYVSN
FT                   VGEKLEPLAKDNDGFISKLDKNGKVLEYKFLTHLNAPKGMMEIGKTLYVVDIDVLRGFD
FT                   LKTKKEIFNLPIKGAIFLNDIEKLDDNTLLVSDTGTGLILKVDLKTKQYDELLKLDLVK
FT                   FGGPNGLYLDRKKHKLFIAGYHPDGVSGGVVMAYDLNTKELSIIKNEKESYDGIVPYKD
FT                   GLLVSSWGNNLNGYIYNLDNVKSVKLEFPLMKGPADIFIEGNILWIPKMAEGKIFKVEL
FT                   NK"
FT   gene            complement(1091696..1092586)
FT                   /locus_tag="C1336_000250212"
FT                   /note="C1336_000250212 identified by Glimmer3 with a raw
FT                   score of 10.12."
FT   CDS             complement(1091696..1092586)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250212"
FT                   /product="putative transcriptional regulatory protein"
FT                   /note="C1336_000250212 identified by Glimmer3 with a raw
FT                   score of 10.12. Gene function extrapolated from Cj1042c
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 132 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30947.1"
FT                   /translation="MNKILSLPEDLKQLKGVNYKKIKSCTFAKYTQTDTSHSTFVNIGS
FT                   HLLTFVRKGYKILHTASKDYKINSYETLFLKAGSYTLSNVGLSKGVYEAYLFFFDNAFL
FT                   IELIYKYKDFFKLDQKFQNYEIFWVKNDKILQGILESFSPHFEENTQILDPIVSLKFEE
FT                   IFLHLLLNKNIYFISFLSGILKEFRLDLSQLFEYCGREFLSVNEMSNFAKLDLATFSKE
FT                   FKKCFGQSPKKWLDEKRLQKAKILLKFSKKNINEIANECAFSSVAWFIERFKEKYEQTP
FT                   KQYQKTKNLYFLSKN"
FT   gene            complement(1092583..1093188)
FT                   /locus_tag="C1336_000250213"
FT                   /note="C1336_000250213 identified by Glimmer3 with a raw
FT                   score of 13.87."
FT   CDS             complement(1092583..1093188)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250213"
FT                   /product="putative thiamine-phosphate pyrophosphorylase"
FT                   /note="C1336_000250213 identified by Glimmer3 with a raw
FT                   score of 13.87. Gene function extrapolated from
FT                   JJD26997_0738 (CP000768.1) after blastn alignment (97.71
FT                   percent identity over a 175 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30948.1"
FT                   /translation="MWDKKIIAISDRKCVEIDFLKQIEKLAKAKVDAIVLREKDLSEFE
FT                   YYDLAKEVLSICTKQKVTCFLHFFDRECLKLGHRYFHAPLSLLRKESKLVKYFHILGTS
FT                   VHSKEELLEAMSYKVNYAFVGHIFESSCKAGLEPKGLDFLKSLLEFSQIPLYAIGGINA
FT                   QNIENFKDINIAGVCMREILMKEKDLKKYLLECRQNLR"
FT   gene            complement(1093178..1094323)
FT                   /locus_tag="C1336_000250214"
FT                   /note="C1336_000250214 identified by Glimmer3 with a raw
FT                   score of 15.96."
FT   CDS             complement(1093178..1094323)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250214"
FT                   /product="thiazole biosynthesis protein ThiH"
FT                   /note="C1336_000250214 identified by Glimmer3 with a raw
FT                   score of 15.96. Gene function extrapolated from Cj1044c
FT                   (AL111168.1) after blastn alignment (96.25 percent identity
FT                   over a 1146 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30949.1"
FT                   /translation="MQDYMQHLPHMQEIKSEILNKVLSQVQSYDESQFSAKDVKNALNQ
FT                   THLSIEHLKALLSSAAEDFIEELAFKSAKVKQKYFGNSISLFTPLYLSNYCNSKCVYCG
FT                   FQKGNKIARAKLNEAEIHEEMQAITKSGLEEILMLTGEGREFASVEYIANACKIAREYF
FT                   KVVGVEIYPMNEDEYKILHEKGCDYVTVFQETYNPLKYSKIHLAGEKRIFPYRFNAQER
FT                   ALKAGMRGVAFAALLGIDDFRKDALATALHAHFLQQAYPHAEISISVPRLRPIINNAKI
FT                   HPKDVSEKRLLQVLCAYRLFLPFAGITISSRERIGFRDEVIKLGATKMSAGVSVGIGEH
FT                   KGEKKGDEQFEISDDRSVDEILSMLKRSNLQAVMSDSIYVG"
FT   gene            complement(1094326..1095102)
FT                   /locus_tag="C1336_000250215"
FT                   /note="C1336_000250215 identified by Glimmer3 with a raw
FT                   score of 18.09."
FT   CDS             complement(1094326..1095102)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250215"
FT                   /product="thiG protein"
FT                   /note="C1336_000250215 identified by Glimmer3 with a raw
FT                   score of 18.09. Gene function extrapolated from
FT                   CJJ81176_1066 (CP000538.1) after blastn alignment (97.03
FT                   percent identity over a 740 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30950.1"
FT                   /translation="MQENLKNDKLKIGKYEFDSRFILGSGKYSLELIKSAIEEAKAQII
FT                   TLALRRANTGEIANILDYIPKNITLLPNTSGARNADEALRIARLSRELGCGELIKIEVI
FT                   SDSRYLLPDNYETIKACELLAKEGFTPLPYMHADLYAARAMRDAGAAAIMPLAAPIGSN
FT                   KGLCAKEFIQILLNEIDLPIIVDAGIGSPAQACEAMQMGVSAVMVNTAIAEAKDITLMA
FT                   RAFSLAVNAGRAAFLAGLASVSEAKASSPLTGFLRD"
FT   gene            complement(1095105..1095905)
FT                   /locus_tag="C1336_000250216"
FT                   /note="C1336_000250216 identified by Glimmer3 with a raw
FT                   score of 16.38."
FT   CDS             complement(1095105..1095905)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250216"
FT                   /product="thiamine biosynthesis protein ThiF"
FT                   /note="C1336_000250216 identified by Glimmer3 with a raw
FT                   score of 16.38. Gene function extrapolated from CJE1190
FT                   (CP000025.1) after blastn alignment (95.63 percent identity
FT                   over a 801 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30951.1"
FT                   /translation="MRVKFNGKELDTDFKTSLEFFENISKNENDVWIINGFATKENIAL
FT                   NEDDELFCIEKNTLPPKDALDAMMRARHTPKLHDKLKNGRVAVCGLGGLGSHIAINLAR
FT                   SGVGFLKLIDFDVIEPSNLNRQAYRVSDLGKFKTEALKEQISEINPYISVEICTLKIDE
FT                   DNLKSLFKDIDIVCEAFDGAIAKAMMAQNFHRFYKDSILICASGLAGYGDSNSIQTRKI
FT                   AKNFYVCGDLVNGAKVGNGLMAPRVNICAGHQSNLVLELLANKE"
FT   gene            complement(1095905..1096096)
FT                   /locus_tag="C1336_000250217"
FT                   /note="C1336_000250217 identified by Glimmer3 with a raw
FT                   score of 19.62."
FT   CDS             complement(1095905..1096096)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250217"
FT                   /product="putative thiamine biosynthesis protein"
FT                   /note="C1336_000250217 identified by Glimmer3 with a raw
FT                   score of 19.62. Gene function extrapolated from Cj1047c
FT                   (AL111168.1) after blastn alignment (94.59 percent identity
FT                   over a 185 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30952.1"
FT                   /translation="MIINGQKLELKELKFMDFIKEKGFKIELIALELNGEIIPKSEFEN
FT                   LILKENDKAEIVSFVGGG"
FT   gene            complement(1096106..1097203)
FT                   /locus_tag="C1336_000250218"
FT                   /note="C1336_000250218 identified by Glimmer3 with a raw
FT                   score of 15.67."
FT   CDS             complement(1096106..1097203)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250218"
FT                   /product="succinyl-diaminopimelate desuccinylase"
FT                   /note="C1336_000250218 identified by Glimmer3 with a raw
FT                   score of 15.67. Gene function extrapolated from CJE1192
FT                   (CP000025.1) after blastn alignment (97.54 percent identity
FT                   over a 1098 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30953.1"
FT                   /translation="MNAKEFLIELLKFKSVTPNDDGALNFIAMELSDFEAFFIEKEGIK
FT                   NLLLTKKFKDEGEHLAFGGHVDVVPAGEGWSSDAFVPMEKEGFIYARGAQDMKSGVAAF
FT                   VDAVKNADFKGARLSLILTSDEEGEAIYGTKAVLEWMQERDMLPDYAVVAEPTCVKKIG
FT                   DSIKIGRRGSINGKLLIRGKQGHVAYPEKCINPVHDFAPVLKLLAGFDLDPGSAEFSPS
FT                   KIVITDIRGGMGVCNVTPNDLKLMFNVRNSPDTSLEDVKSYVEKICHGLNYELELKQSS
FT                   EAFLTNIDNKIVQKMNESVQKITHEVPELNTKGGTSDARYFAKYGVKVVEFGVCNDRIH
FT                   AIDERVSIEEFEKLCLVFKDLIENF"
FT   gene            complement(1097207..1097806)
FT                   /locus_tag="C1336_000250219"
FT                   /note="C1336_000250219 identified by Glimmer3 with a raw
FT                   score of 16.06."
FT   CDS             complement(1097207..1097806)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250219"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250219 identified by Glimmer3 with a raw
FT                   score of 16.06. Gene function extrapolated from C8J_0990
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 154 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30954.1"
FT                   /translation="MFDSFLSGVFLGFGVSVPFGPVNILILTYALKAFKNSIAVGLGAF
FT                   SIDMLYLFLLQFGLLNFLDNVIFMRSLAIFGFCFLTYMAYLMLRKKKESLNLEHKEFKE
FT                   SLLKSYIKGAFLNGSNPFVIGFWLSAASVVLSSDHAYLMTLGLVVAILFWVSALAFVVA
FT                   RYSHVFSAKVVFIINIISAIIIEYFALNLLYKTFLG"
FT   gene            complement(1097799..1098500)
FT                   /locus_tag="C1336_000250220"
FT                   /note="C1336_000250220 identified by Glimmer3 with a raw
FT                   score of 14.53."
FT   CDS             complement(1097799..1098500)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250220"
FT                   /product="NAD-dependent deacetylase"
FT                   /note="C1336_000250220 identified by Glimmer3 with a raw
FT                   score of 14.53. Gene function extrapolated from CJE1194
FT                   (CP000025.1) after blastn alignment (99.22 percent identity
FT                   over a 128 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30955.1"
FT                   /translation="MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRKN
FT                   PKKVLDFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCKDVVH
FT                   LHGFLPELRCLKCEEIFNIGYEKITDKQCPKCKSKDLRHNIVMFEEQAPAYATLYSLLN
FT                   QTSLFISIGTSGAVLPVGRYASMCEKSILNIYEKDANLERYFDKIYIEDIISAIDKIAL
FT                   DIENFMKDGNV"
FT   gene            complement(1098543..1099097)
FT                   /locus_tag="C1336_000250221"
FT                   /note="C1336_000250221 identified by Glimmer3 with a raw
FT                   score of 10.93."
FT   CDS             complement(1098543..1099097)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250221"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250221 identified by Glimmer3 with a raw
FT                   score of 10.93. Gene function extrapolated from C8J_0992
FT                   (CP000814.1) after blastn alignment (99.15 percent identity
FT                   over a 469 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30956.1"
FT                   /translation="MDSEFLSSFNKTIKEYALSNPIFKLSIGKRVLNNELLENGQIPVY
FT                   SANVLEVFGFVNKEILQDYDNDSVLWGIDGDWMVGFIPKNKKFYPTDHCGVLRVDDTKI
FT                   NAKYISFVLNEAGKKQGFSRKLRASIDRIKALRVKLPSLEFQDQIADITDKIEKKINEY
FT                   KIELDRLEKEKEKILQKYLFS"
FT   gene            complement(1099139..1102382)
FT                   /locus_tag="C1336_000250331"
FT                   /note="Features C1336_000250222, C1336_000250223 joined to
FT                   form C1336_000250331 to correct 454 sequencing error
FT                   (C1336_000250222 identified by Glimmer3 with a raw score of
FT                   12.87, C1336_000250223 identified by Glimmer3 with a raw
FT                   score of 9.84)."
FT   CDS             complement(join(1099139..1102096,1102098..1102382))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250331"
FT                   /product="hypothetical protein"
FT                   /note="Features C1336_000250222, C1336_000250223 joined to
FT                   form C1336_000250331 to correct 454 sequencing error
FT                   (C1336_000250222 identified by Glimmer3 with a raw score of
FT                   12.87, C1336_000250223 identified by Glimmer3 with a raw
FT                   score of 9.84). Gene function extrapolated from C8J_0992
FT                   (CP000814.1) after blastn alignment (99.90 percent identity
FT                   over a 1928 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30957.1"
FT                   /translation="MITKDNLKQVLKNLGFKNKNENYVKTINNYTLLIDYKNQSINYPK
FT                   EIKIHDKTTSNFSHPENFVVFECVHRLLEKGYKAEHLELEPKWNLGRDKKGGKADILVK
FT                   DNENNPYLIIECKTTDSKNSEFIKEWNRMQEDGGQLFSYFQQEKGVKYLCLYTSDFSDK
FT                   LEYKNYIIQAYDNEEYLKEKELQNSYKKSNNNIELFKTWKESYELQYFKQGIFEANVNA
FT                   YKILEITPTFDNLKELKEEGKYHEFAKILRKHNISGKENAFDKLVNIFLCKIYDETFNK
FT                   NNLKFGYFGVMADTYANMQDRLMWLYKEAMKEFLGEKITFVSNEDIEKDFKQLKIKTLK
FT                   EVMQNYIKELKFYSNNDFAFLEVHNKELFLKNALVLKEIVELFANYKLTQNSTNQFLGN
FT                   LFELFLQKGMKQDEGQFFTPIQICEFIMYSLPLQEMLSKSSKALRVIDYACGAGHFLNT
FT                   YANELKRYLTEDELKEHYKNIYGIEKEYRLSKVSKVSSAMYGQNEINILYADALASFEL
FT                   ANTNNLEGEKAKPQIESNSFDLLIANPPYSVKGFLETLSDKSKNTYKLFNDDINIETNN
FT                   SIECFFCERANQILNDNAKAAIILPSSILNKDSIYKNTREILFQNFDFIAIVELGNQTF
FT                   GATGTNTIILFLRKKETFKQENHLISQDYSLIKERIEAENLKDNENFYQNYLSAYCDFR
FT                   KFDKELYSNFLNGNLDFNLAELEAFKDYRNAFRQTSDYKKLKESKIYKESKDKQDLEDK
FT                   AFLAYAQAIEKDKLLYFSLSLNQEVLIIKSPSDIKEQKKFLGYEWSNRKGDEGLKELHE
FT                   PYLSPLFERGNPQNETKLNTLIYKSFLNTLDVIPQELQTYATKARLVDMMDFEKVEFNK
FT                   AISLNPKTQREEIKSQYPLVKLKICGDFFMGGTPSRKNINYWNGDIKWLTISDYSNRQV
FT                   IMDAKEKITREGFKNSNAKMIQKGAVVVSIYATIGRVGILGEDMTTNQAIVAIIPNKEF
FT                   INKYLMYAIDYFKFQLYNEVIITSQQNINLGILQNMVIPKPPLEIQKQIVAECEKVEEQ
FT                   YNTIRMSIEEYQKLIKAILQKCGIIDDGGGMS"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1102391..1104598)
FT                   /locus_tag="C1336_000250224"
FT                   /note="C1336_000250224 identified by Glimmer3 with a raw
FT                   score of 12.56."
FT   CDS             complement(1102391..1104598)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250224"
FT                   /product="DNA mismatch repair protein"
FT                   /note="C1336_000250224 identified by Glimmer3 with a raw
FT                   score of 12.56. Gene function extrapolated from CJE1196
FT                   (CP000025.1) after blastn alignment (98.50 percent identity
FT                   over a 865 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30958.1"
FT                   /translation="MNDTKEELILKLDLNSYLEEFKALFARDKEIFLQGDSNLHFKRIH
FT                   ELCEVEFPTIPELSNLDKALVHLSKQGILHLDEIFEFVKIFRYFEKLKKIKLGTNLDSW
FT                   LQKIEFVSGALELCLNFDEKGELKESLDERLVNLNAALRLKNESIIAEFKKFCYTKALM
FT                   PYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDIEKIKN
FT                   QKEEIYYEYAKNFSAFLAKNLPFLKFINTAFDLFDHYSARVLLAKKKDFEFVLCDQSTD
FT                   LVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKHLLPMHIK
FT                   ASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSKKNLLLGIDEIELGTDFE
FT                   EAACLYSVLISKLIANNLKIIITTHHKRLAILLAKNEQVELIAALYDEELSRPKYEFLK
FT                   GTIGKSYAFETALRYQIPPNLVSEAKKLYGEDKENLEELVGKNINLELELKAKLENVEK
FT                   KEQKVDEILLSLKDQKEKNEQEFRTSLRNLEFKFHKAIEEAKKTIQLKDTKDKQRSLNK
FT                   ANELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVEGDGIKLRVPLKLLK
FT                   KSGAMPKKVVKTSISVSKPSNLSVTLDLHGLRSDEAISRLDKFISDALIAGFDEVLIYH
FT                   GIGTGKLAFAVREFLKTHKSVKGFNDAPINQGGFGAKVVKL"
FT   gene            complement(1104591..1104941)
FT                   /locus_tag="C1336_000250225"
FT                   /note="C1336_000250225 identified by Glimmer3 with a raw
FT                   score of 12.58."
FT   CDS             complement(1104591..1104941)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250225"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250225 identified by Glimmer3 with a raw
FT                   score of 12.58. Gene function extrapolated from
FT                   CJJ81176_1073 (CP000538.1) after blastn alignment (96.92
FT                   percent identity over a 195 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30959.1"
FT                   /translation="MSRFFLYFLIILILALITFALREKLGKKTKPFFGILLVIFIILAV
FT                   FFEFENTQKSRLRTDIIVAFNQNKNILCKDINVSKAYFNYEFGTGSFISKDNNQSFNSL
FT                   IIDIKDCRLNDE"
FT   gene            complement(1104934..1106229)
FT                   /locus_tag="C1336_000250226"
FT                   /note="C1336_000250226 identified by Glimmer3 with a raw
FT                   score of 15.87."
FT   CDS             complement(1104934..1106229)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250226"
FT                   /product="UDP-N-acetylmuramate--alanine ligase"
FT                   /note="C1336_000250226 identified by Glimmer3 with a raw
FT                   score of 15.87. Gene function extrapolated from
FT                   CJJ81176_1074 (CP000538.1) after blastn alignment (95.55
FT                   percent identity over a 1282 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30960.1"
FT                   /translation="MQNIHFIGIGGIGISALARFLKEKGFEISGSDLKESKITKELEKE
FT                   GVKVSIPHHKDNILNKDLVIYSAAIKEENPEFKHAKELGIKCLSRKEALPLILEDKRVF
FT                   AVAGAHGKSTTSSILASLLDDASVIIGAILKEFGSNMIYKESQNLVFEADESDSSFLNS
FT                   NPYLAIVTNAEAEHLDHYGNEVSKLHHAYVEFLDTAKIRVINAEDEFLKNYKNESIKLY
FT                   PSKDIKNCTMCIENFKPFTSFELKDLGEFKVFGMGYHLALDASLTILAALNFLDIEMIR
FT                   TRLKNYQGIKKRFDILHADENLVLIDDYGHHPTEIKATLSAAQEYAKLGGYKKITAIFE
FT                   PHRYTRLAANLKEFAKAFEGVDELVILPVYAAGEESIEIDLKAVFPKALFVEDIKREGK
FT                   FLVASKGQVFEEGLIIGFGAGDISNKLRQKNE"
FT   gene            complement(1106296..1108268)
FT                   /locus_tag="C1336_000250332"
FT                   /note="Features C1336_000250227, C1336_000250228 joined to
FT                   form C1336_000250332 to correct 454 sequencing error
FT                   (C1336_000250227 identified by Glimmer3 with a raw score of
FT                   11.20, C1336_000250228 identified by Glimmer3 with a raw
FT                   score of 8.18)."
FT   CDS             complement(join(1106296..1108062,1108062..1108268))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250332"
FT                   /product="putative integral membrane protein"
FT                   /note="Features C1336_000250227, C1336_000250228 joined to
FT                   form C1336_000250332 to correct 454 sequencing error
FT                   (C1336_000250227 identified by Glimmer3 with a raw score of
FT                   11.20, C1336_000250228 identified by Glimmer3 with a raw
FT                   score of 8.18). Gene function extrapolated from
FT                   CJJ81176_1075 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 91 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30961.1"
FT                   /translation="MRKILLQIFIFSVLFIVTFAINRILMQNSFIPTGLISDKNEIFLM
FT                   YLLGVFHDIRFLSAAFLPFLLCGFFKFNFSNIKINNKLVIYSKNFYFIFSSVYIIVLSC
FT                   LCIGFSYAKYYYYEIYKTKFDIFMFTLKDDNTKTILSIIYHDYPILKILALMLIFGVFV
FT                   VFLNLKILNLKLKPVNLRLFPLIALNLILIIVYVIALRGPFKHVAINVQNYSFSEYSVV
FT                   NDTMLNPIMAFFWALKQYKEEAALKVITSLKAQELKEKLFDYLHQSPINLKAEKNHPSV
FT                   FVNLMESFGLNLADFTNTEHNFLGSLDKHFKQDFLFKRFLSSSNGTIPSFANLFFVSPL
FT                   SNISTSKFQKTYLDLTPIVVYKKAGYKVIFVSAGNGSWQNIKNYLSILGVDEIIDENIL
FT                   MKEYNGAKDSENGYGVADEFLYKKVYDLLQKNPHKTLIIALTISNHPPYKIPQNDLPKL
FT                   QNIPQALLNMLPYEKDKQDNIIKAYTYANNEFGKFLDKVKQSPFKNSVIIAATGDHRVR
FT                   EMSMDLNSQKAFAYSVPFYLYIPKDLQDNIYYDKDRVGSHKDIFPTLYALSLNNVKYLS
FT                   VGGRNMLARPNDEKLEFGINDAVWIDKKGIYSGGKGYYFESNDTLKDMNKAFNLDGYTK
FT                   DFDKFYRELNLYQLAERLGISK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1108280..1109056)
FT                   /locus_tag="C1336_000250229"
FT                   /note="C1336_000250229 identified by Glimmer3 with a raw
FT                   score of 13.72."
FT   CDS             complement(1108280..1109056)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250229"
FT                   /product="hydrolase, carbon-nitrogen family"
FT                   /note="C1336_000250229 identified by Glimmer3 with a raw
FT                   score of 13.72. Gene function extrapolated from CJE1199
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 166 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30962.1"
FT                   /translation="MSKIAALQFPTLALSESRLDYYLKASKDNGANLVVLGEYVINSFF
FT                   TELLHMPKNMIKEQSEAKKESLIKLAKKYELEIIAPYVSVEAKSYKKLCLKVTPNGVKS
FT                   YEQQILMPYEHWNEEKFFSNKTPSELKIFTFNYEKLKCALLFGFETHFDIFWQQIMAKK
FT                   IDLVIVPSACTFESKQRWEELLKTRAFLNSTSILRVNRIGKTKDEWNFYGDTLFINAFG
FT                   EIESKLGSEEEMLIIEPKKSDEARKLWGFDKILKNF"
FT   gene            complement(1109049..1109222)
FT                   /locus_tag="C1336_000250230"
FT                   /note="C1336_000250230 identified by Glimmer3 with a raw
FT                   score of 20.16."
FT   CDS             complement(1109049..1109222)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250230"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250230 identified by Glimmer3 with a raw
FT                   score of 20.16. Gene function extrapolated from C8J_0998
FT                   (CP000814.1) after blastn alignment (98.28 percent identity
FT                   over a 174 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30963.1"
FT                   /translation="MSFEENLKHANKSLEKLNNQELALDESVKIYKEGLESIKKARLEL
FT                   EKAKLEVEQIDE"
FT   gene            complement(1109219..1110676)
FT                   /locus_tag="C1336_000250231"
FT                   /note="C1336_000250231 identified by Glimmer3 with a raw
FT                   score of 12.86."
FT   CDS             complement(1109219..1110676)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250231"
FT                   /product="inosine-5'-monophosphate dehydrogenase"
FT                   /note="C1336_000250231 identified by Glimmer3 with a raw
FT                   score of 12.86. Gene function extrapolated from C8J_0999
FT                   (CP000814.1) after blastn alignment (97.81 percent identity
FT                   over a 1458 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30964.1"
FT                   /translation="MKIVKRALTFEDVLLRPGYSEVLPKEVKIHTKLTKNITLNMPLIS
FT                   AAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSESGVIIDPIFVSPKAS
FT                   VAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLRFESDFSNLVENVMTKMPLITAPKG
FT                   CTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKKRKEYPDANKDNFGRLRVGAAI
FT                   GVGQMDRVDALVEAGVDVVVLDSAHGHSKGIIDTVKAIKTKYPNLDLIAGNIATAAAAK
FT                   ALCEAGVDAVKVGIGPGSICTTRIVSGVGVPQISAIDECVEEANKFGVPVIADGGIKYS
FT                   GDIAKALAVGASSVMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSLGAMQKGSSDRYF
FT                   QQGTAQDKLVPEGIEGRVPYVGSIRSVVHQLLGGLRSSMGYVGAKDIEDFQKRAEFVEI
FT                   TTAGLKESHVHDVTITHEAPNYKVNHQ"
FT   gene            complement(1110686..1112047)
FT                   /locus_tag="C1336_000250232"
FT                   /note="C1336_000250232 identified by Glimmer3 with a raw
FT                   score of 17.24."
FT   CDS             complement(1110686..1112047)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250232"
FT                   /product="aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase,
FT                   A subunit"
FT                   /note="C1336_000250232 identified by Glimmer3 with a raw
FT                   score of 17.24. Gene function extrapolated from C8J_1000
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 635 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30965.1"
FT                   /translation="MITLKEALKYSKEELENLKKELNEKAKKEKKIGAYIEQFLDKDLS
FT                   VSGEGVPVAIKDNISVKGWELTSASKILQGYIAPYDASVIVNLKANGFSPFGRCNMDEF
FT                   AMGSSTASSYYGKTLNPLNFERVPGGSSGGSAAAVAGGLALASLGSDTGGSVRQPAAFC
FT                   GCVGFKPSYGRVSRYGLASYSSSLDQIGVLTQNVEDAAILYDAIAGYDKMDSTSANIEF
FT                   IKTAPNLNANKKLKIAVIENYVNDADSEVKNALLKTIDMLKANGHEIVYKNLLDSKFDI
FT                   AAYYIIATAEASANLSRYDGVRYGKRSENIQNLKEMYVNTRSEGFGEEVKRRILLGTFV
FT                   LSSGYYDAYYIKAQKARAFIKAKYEEILQDCDLIFMPVTPTTAFKFDTQKSPMQTYLED
FT                   VYTISVNLAGLGGISVPVAKDKEELNISAQLICKAYDEQTLLDGALSLEQMIKH"
FT   gene            complement(1112148..1114901)
FT                   /locus_tag="C1336_000250233"
FT                   /note="C1336_000250233 identified by Glimmer3 with a raw
FT                   score of 14.84."
FT   CDS             complement(1112148..1114901)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250233"
FT                   /product="isoleucyl-tRNA synthetase"
FT                   /note="C1336_000250233 identified by Glimmer3 with a raw
FT                   score of 14.84. Gene function extrapolated from C8J_1002
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 76 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30966.1"
FT                   /translation="MDYKETLLLPSTTFAMRANLAELEPQRFKKWFEQNYAYEKMKENR
FT                   KNAKKSFTLHDGPPYANGHIHIGHALNKILKETIIKTHYFKGESVRFTPGWDCHGLPIE
FT                   QQVEVKLGEKKKSLSKKEIREFCRQHASEFVDIQREEFKNLGIIADWDKPYLTMKFEFE
FT                   AAIYRTLCEIAKKGLLCERSKPVFWSWAAKSALAEAEVEYQDKEDYSIFVAFDLDVKAC
FT                   EKLGVSKASAVIWTTTPWTLVANQAIALNPNENYVITKEGLIFASALLEGMVEKGLTSG
FT                   EIQKELNAKEFEKLEAINPLNGRKSVLIMGEHVLMDGGSGLVHTAPGHGEDDYYACLKY
FT                   DIEVLMPVDDSGCYDETLRAKGLLPSHLLEEFIGLHIFKANEKILELLGEKLLHSSKFI
FT                   HSYPFCWRTHKPVIYRATKQWFILMDEPKLQGKTLRECAKEQLLKTTFYPQSGVKRIGS
FT                   MVENRPDWCISRQRDWGTPIAFFRDKNTKEVIFDDELFDFVAAIFEKHGADAWWEFEIK
FT                   DLIPENSKYKAENLEKVYDILDVWFDSGSTFNAVLNSGLYDAGEKRASMYLEGSDQHRG
FT                   WFQSSLLVGTAINESAPYESILTHGFTTDEKGQKMSKSKGNVIAPEYVAKTYGVEILRL
FT                   WILLSDYSSDLKISDNILKQVGEQYRKIRNTIRFLLANTNDLKDLEVKEFSFIDKWILS
FT                   RATKVFKASKEAFFAYEFAKGFSLLLNFLSADLSGIYLDISKDRLYCDSENAQRRKSAQ
FT                   VAMALIAKELLNLLAPNLSYSVDEALEHANVLIKGGAKDVFDLSLTQDFDYDFGIDDTF
FT                   LMSAREKFFEQIDILKKDKIIKSTLELNLNISFNKFPNEELADWFMVSQISNENEEILA
FT                   EFEVENEKFKITKASLCKCPRCWKLQSKDEETPCLRCEEVLKGIQC"
FT   gene            1115000..1116088
FT                   /locus_tag="C1336_000250234"
FT                   /note="C1336_000250234 identified by Glimmer3 with a raw
FT                   score of 13.16."
FT   CDS             1115000..1116088
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250234"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250234 identified by Glimmer3 with a raw
FT                   score of 13.16. Gene function extrapolated from C8J_1003
FT                   (CP000814.1) after blastn alignment (99.81 percent identity
FT                   over a 535 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30967.1"
FT                   /translation="MKHLLYLIGDELTINEKFKNYIYRTYEEKFKEINEIRIQNKTDKD
FT                   LPFLLENLLNQYDFITLFTSPLHYATVAKILATLNDDNLILKDDTLVPDKAEFSKNSFV
FT                   CNFSNSKINVVKINPSEKLPNLLGHIKLNFAYFCIFGMDDESAILLLQTLTKSYEISIK
FT                   STKLLDNLVLIKATCANFGKLDGFLNSVKNLFGQKVFLGKDPIHFISSKLLEKKLKISF
FT                   AESCTGGLCASTLTKISGVSEIFEGSIISYSNRIKHEWLGISESVLENNGEYSERCVYF
FT                   MLKGIFKTANPDFALAISGVVGEKDEGKIKSGTIYIGAMFRDGTFIQETLYLDGDREFM
FT                   QEQAVLATFCLLLKLKPEIFEI"
FT   gene            1116100..1116524
FT                   /locus_tag="C1336_000250333"
FT                   /note="Features C1336_000250235, C1336_000250236 joined to
FT                   form C1336_000250333 to correct 454 sequencing error
FT                   (C1336_000250235 identified by Glimmer3 with a raw score of
FT                   9.02, C1336_000250236 identified by Glimmer3 with a raw
FT                   score of 9.61)."
FT   CDS             join(1116100..1116369,1116369..1116524)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250333"
FT                   /product="acetyltransferase, GNAT family"
FT                   /note="Features C1336_000250235, C1336_000250236 joined to
FT                   form C1336_000250333 to correct 454 sequencing error
FT                   (C1336_000250235 identified by Glimmer3 with a raw score of
FT                   9.02, C1336_000250236 identified by Glimmer3 with a raw
FT                   score of 9.61). Gene function extrapolated from
FT                   CJJ81176_1082 (CP000538.1) after blastn alignment (98.12
FT                   percent identity over a 426 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30968.1"
FT                   /translation="MKEIKLKEDLEKIYPLIKQLRNNLSLKVFLDKFQLATQTQHYKLF
FT                   AYENEGSYKAACGVMPFNVLYHNHCLYICDFVVDETLRGKGIGQAFLKKIQIWAKDQGY
FT                   EELELSSSFFRTQAHEFYIQKMGFEKSGFVFKKNIKL"
FT                   /artificial_location="low-quality sequence region"
FT   gene            1116570..1117208
FT                   /locus_tag="C1336_000250237"
FT                   /note="C1336_000250237 identified by Glimmer3 with a raw
FT                   score of 9.55."
FT   CDS             1116570..1117208
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250237"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250237 identified by Glimmer3 with a raw
FT                   score of 9.55. Gene function extrapolated from C8J_1005
FT                   (CP000814.1) after blastn alignment (98.91 percent identity
FT                   over a 457 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30969.1"
FT                   /translation="MILRNKINFKELISKRRACKLFNDKKINEKDLHCILESGVLAPSS
FT                   HGFEPWKFVVLEQKEHNLKLSTLCYNQQNVASASHNIIFLARKDLQSKDEFAQKQVRRF
FT                   SGSSEENFQKILEIYTHKTNAMNDDELYHYAQLQCYLAMMQMSLAAMSLGIDSCMIGGF
FT                   EKTKVDDFLHLTYPFETAVILSLGYKAHEPKYSTQRLNFNEVVEFYKEK"
FT   gene            1117208..1117813
FT                   /locus_tag="C1336_000250238"
FT                   /note="C1336_000250238 identified by Glimmer3 with a raw
FT                   score of 15.24."
FT   CDS             1117208..1117813
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250238"
FT                   /product="nitroreductase family protein"
FT                   /note="C1336_000250238 identified by Glimmer3 with a raw
FT                   score of 15.24. Gene function extrapolated from CJE1209
FT                   (CP000025.1) after blastn alignment (97.91 percent identity
FT                   over a 478 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30970.1"
FT                   /translation="MKKELEIFSTRYSCRNFKNEKLKKEDLNSILEIARLSPSSLGLEP
FT                   WKFIVVQDEKRKEELSKICNQQKHVKDCAVLIIIISRLDFLDYFEEKLRKRDMSETEIQ
FT                   KRLDTYMPFLKSLNQEQKISYAREQAHIALASIIYSANALNIASCTIGGFDKEKLDSYL
FT                   SLDIQKERSSLVVALGYCNDEKNPQKNRFSFDEVVKFI"
FT   gene            1117938..1118474
FT                   /locus_tag="C1336_000250239"
FT                   /note="C1336_000250239 identified by Glimmer3 with a raw
FT                   score of 11.80."
FT   CDS             1117938..1118474
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250239"
FT                   /product="CDP-diacylglycerol--glycerol-3-phosphate
FT                   3-phosphatidyltransferase"
FT                   /note="C1336_000250239 identified by Glimmer3 with a raw
FT                   score of 11.80. Gene function extrapolated from CJE1210
FT                   (CP000025.1) after blastn alignment (97.68 percent identity
FT                   over a 517 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30971.1"
FT                   /translation="MNLPNILAVFRMVLAPLLFFLLIHHFENIHQSWINYFAALTFSLA
FT                   ALSDFFDGYIARTWKQTTKLGGILDPLADKMLVLAAFLGLLFTGKANEWVIYIILVREF
FT                   FITGFRVVMISENLNVNASFAGKLKTAFQMTAIGFLIMEWIGGEILLYIALILTLYSGF
FT                   EYIYTYTKAQKKGEK"
FT   gene            1118471..1119577
FT                   /locus_tag="C1336_000250240"
FT                   /note="C1336_000250240 identified by Glimmer3 with a raw
FT                   score of 9.17."
FT   CDS             1118471..1119577
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250240"
FT                   /product="membrane-associated zinc metalloprotease,
FT                   putative"
FT                   /note="C1336_000250240 identified by Glimmer3 with a raw
FT                   score of 9.17. Gene function extrapolated from
FT                   CJJ81176_1086 (CP000538.1) after blastn alignment (96.59
FT                   percent identity over a 1026 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30972.1"
FT                   /translation="MRSLLFLIIILILGIKFYSIEFLATVLVISFLIFFHELGHFLAAR
FT                   SLGVKVEVFSIGFGKSLIEREFKGTNYRLSTLPLGGYVKLKGQDDMRPGFENLDKDSYS
FT                   ILSPLKKIYILFAGPFFNLILAFFLYIIIGNLGLNKLAPQIGNIAPNSAAQDIGLQKND
FT                   TILEINGVKIQSFDEISKHLSLEPLKILTNREGKNLEFILTPKIGQGYNDFGQIIEKPQ
FT                   LGISPNGTSTLVKHQGLESFKYAAQESFQASTLIIKGIVKLISGEVEAKNLGGIITMTE
FT                   ITSKAAQNSFTLLLFITALISINLGILNLLPIPMLDGGHILFNIYEMIFRRKVPQRAFE
FT                   YLSYAGMAILLSLILFATYNDISRIAGE"
FT   gene            1119570..1120430
FT                   /locus_tag="C1336_000250241"
FT                   /note="C1336_000250241 identified by Glimmer3 with a raw
FT                   score of 6.71."
FT   CDS             1119570..1120430
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250241"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250241 identified by Glimmer3 with a raw
FT                   score of 6.71. Gene function extrapolated from C8J_1010
FT                   (CP000814.1) after blastn alignment (99.68 percent identity
FT                   over a 311 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30973.1"
FT                   /translation="MNKKFSYPIPNFTDRRKSIIFWRYLRFQARKILYFPQVRLLEKTL
FT                   NEEKNKHLKDFFSQRPYACYNAIRRFCDKSFKANERVKTLIYDVDKGLACFKFLPEEQI
FT                   IFSFDEDFELFLGYNYNVCEEGFWAFSLKFKKYTILQCNFCFTLENNLLLSCIQGYKYK
FT                   DFNILEINKILTKKCHGLRPVALLIECSKMLCEILKLQATLGVHEKNQIRSQKGKEKGY
FT                   FVDYQKIWLENGGELIKINKHKYYKLHHSQKNLEEIPSQKRSMYKKRFAMLENIKQNLF
FT                   QILSK"
FT   gene            complement(1120423..1121424)
FT                   /locus_tag="C1336_000250242"
FT                   /note="C1336_000250242 identified by Glimmer3 with a raw
FT                   score of 13.62."
FT   CDS             complement(1120423..1121424)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250242"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250242 identified by Glimmer3 with a raw
FT                   score of 13.62. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30974.1"
FT                   /translation="MKIGLETESMHLWFQNGRMDIFSYIDFAKNLGCEGVIINIIKDFG
FT                   LDEEWGCLGSDDENHLKKIKAKLDEYNMYCEIDSKGFNKDKFEKIAKVASILGAKIIRS
FT                   YVPLTDKNKKVKHASDGAYDDSKITTRFDKEDFLATKDEIKALIPILEKYDLKLAIENH
FT                   EYQTSEDLLDLLKLINHPKIGFLYDFGNSMMAYEDPIKACKDMAKYTFSTHCKDHIVFI
FT                   EEGVEYVCGVPLGEGNLDIKTCVEILKKEGLDRINVEQCYPYCATFKREKGTGGVKELG
FT                   KGAFKIEKALFEDLKAMQYYYPQEVSQECLERLLKLQKKGCEKSVEYLKSII"
FT   gene            complement(1121421..1122695)
FT                   /locus_tag="C1336_000250243"
FT                   /note="C1336_000250243 identified by Glimmer3 with a raw
FT                   score of 13.53."
FT   CDS             complement(1121421..1122695)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250243"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250243 identified by Glimmer3 with a raw
FT                   score of 13.53. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30975.1"
FT                   /translation="MNSTKPIRWFTFIVLVIGGGTVFKLSSLKDAFYVPMQEFMNLSNT
FT                   QIGLALSVYGIVQTVGNIASIYIADRFSKKILIPFSLVCVGLVGIYISTFPSFYGILIA
FT                   WGLLSLFGEVVYWPVLLKAIRLLGDSTQQGRLFGFLEAGRGVIDTIVAFSALGIFLLLG
FT                   SGAGGLKAAILFYSACVIIAGILAYFLLEDDKINTQDEQGNEISKNKAAWNGVIKAIKT
FT                   PEIWVVSLTIFTIYSVYCGLTYFIPFLKDIYGMPVALVGAYGIINQYTLKLVGGPIGGY
FT                   LADKTFKSSTRYLRFALILAALAILIFVFMPHEKLNIYFGMSLTLGFAALVFTMRATFF
FT                   APVDEIEMPREISGAAMSIACIFGYSPQLFCFALYGFMIDRFKGLLGYQIVFALMGIFA
FT                   ICGVIVTTILLKMIARKKALKGVVS"
FT   gene            1122913..1123290
FT                   /locus_tag="C1336_000250244"
FT                   /note="C1336_000250244 identified by Glimmer3 with a raw
FT                   score of 10.08."
FT   CDS             1122913..1123290
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250244"
FT                   /product="ribosomal protein S6"
FT                   /note="C1336_000250244 identified by Glimmer3 with a raw
FT                   score of 10.08. Gene function extrapolated from
FT                   JJD26997_0653 (CP000768.1) after blastn alignment (99.47
FT                   percent identity over a 378 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30976.1"
FT                   /translation="MKHYEVLFILKPTLTEEEVNAKLEFVKEVLTKNGAEIETVVPMGT
FT                   RKLAYKIKKYERGTYFVIYFKAPTNLIAELERVLRITEEVIRFLIVKYENKKEIAAWEK
FT                   LSHGIKQSKKEIKPLDAPEIQ"
FT   gene            1123299..1123850
FT                   /locus_tag="C1336_000250245"
FT                   /note="C1336_000250245 identified by Glimmer3 with a raw
FT                   score of 12.49."
FT   CDS             1123299..1123850
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250245"
FT                   /product="single-strand binding protein"
FT                   /note="C1336_000250245 identified by Glimmer3 with a raw
FT                   score of 12.49. Gene function extrapolated from
FT                   CJJ81176_1089 (CP000538.1) after blastn alignment (97.26
FT                   percent identity over a 438 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30977.1"
FT                   /translation="MFNKVVLVGNLTRDIEMRYAQSGSAIGASAIAVTRRFTTNGEKRE
FT                   ETCFIDISFYGRTAEVANQYLTKGSKVLIEGRLRFEQWSDQNGQNRSKHSIQVENMEML
FT                   GGNSNAPQQGGIGNNSFSNNNYSGNYENQSYDPYMSENQNFNKAKANPAPQRNQNPQHE
FT                   EKLKEIDIDAYDSDDTNLPF"
FT   gene            1123861..1124121
FT                   /locus_tag="C1336_000250246"
FT                   /note="C1336_000250246 identified by Glimmer3 with a raw
FT                   score of 8.81."
FT   CDS             1123861..1124121
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250246"
FT                   /product="30S ribosomal protein S18"
FT                   /note="C1336_000250246 identified by Glimmer3 with a raw
FT                   score of 8.81. Gene function extrapolated from C8J_1013
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 261 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30978.1"
FT                   /translation="MAEKRKYSRKYCKYTEAKVEFIDYKDTAMLKHALSERFKIMPRRL
FT                   TGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVINNPFEGL"
FT   gene            complement(1124182..1126557)
FT                   /locus_tag="C1336_000250247"
FT                   /note="C1336_000250247 identified by Glimmer3 with a raw
FT                   score of 12.48."
FT   CDS             complement(1124182..1126557)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250247"
FT                   /product="ATP-dependent protease La"
FT                   /note="C1336_000250247 identified by Glimmer3 with a raw
FT                   score of 12.48. Gene function extrapolated from Cj1073c
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 636 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30979.1"
FT                   /translation="MQIEEIQNYPANLPVLVEDELFLYPFMITPIFINDSSNMKALDLA
FT                   IKNDSMLFVAPSRLENGRNFDEIYNCGVIGTIMRKVPLPDGRVKILFQGYAKGKIIEQI
FT                   SNKPLEAKIELIKEDFLEGTKKEALLEVLKEKVKNLANISHYFSPDLLRTIEEGFDASR
FT                   ICDLILNTVRIKKQVAYEFFVLTDLEQKLVKLIDLIAQEIEANKIQKEIKNKVHSRIDK
FT                   VNKEYFLKEQLRQIQKELGSDTQKEDEVREYQKRLELKKKFMHEDAYKEIKKQIEKFER
FT                   IHQDNSEASMIQTYIETALDIPFEKISKKKLDIKEVSKQLNHDHYALNKPKERIEEYFA
FT                   VRELLEKRKIAEKDGAKVILCLYGPPGVGKTSLANSVSKALKRELIRIALGGLEDVNEL
FT                   RGHRRTYIGAMPGRITQGLIEAKQINPVIVLDEIDKLNRSFRGDPSAVLLEILDPEQNS
FT                   KFRDYYLNFNIDLSKVIFIATANDISNIPAPLRDRMEFIELSSYTPSEKFHIMKKYLIP
FT                   DELKKHGLKSNELSIDDETIELIISDYTRESGVRNLRRKVAELCRKSAKKLLLENIKKV
FT                   IINTKNLNEFLDKKVFEIEKNNGENQVGQVNGLAWTSVGGDVLKVEAVKIKGKGELTLT
FT                   GSLGDVMKESARIAFSMIKVLIDEGKIKIPKKIIIDPKVNVYDSYNIHIHVPDGATPKD
FT                   GPSAGITISIAIASIFSDKKVKADVAMTGEIDLKGKVLPIGGLKEKLIAAYKADIKTAL
FT                   IPRKNYERDLKDIPSEVRDNMEIIAVDTFSDVLEYTLV"
FT   gene            complement(1126574..1127221)
FT                   /locus_tag="C1336_000250248"
FT                   /note="C1336_000250248 identified by Glimmer3 with a raw
FT                   score of 10.34."
FT   CDS             complement(1126574..1127221)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250248"
FT                   /product="putative lipoprotein"
FT                   /note="C1336_000250248 identified by Glimmer3 with a raw
FT                   score of 10.34. Gene function extrapolated from
FT                   JJD26997_0649 (CP000768.1) after blastn alignment (98.84
FT                   percent identity over a 603 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30980.1"
FT                   /translation="MKKGIFLLVFLSVFFNACSTKNDEGLYNLSASEWYKQIIKDLQDK
FT                   DLEKADDHYNGMASEHIADPLLETTLIILAQAHMDEEEYKLAEFYLDEYNKKFGNSRNA
FT                   DYIRYLKIKAKFDAFAVPNRNQALMLESQKEIDTFLKDYPYTEYEPLVQTMLTKFNLAV
FT                   FYLNSTIENLYQRIGHDESAQIYKQRLQESEFYQQSIIKPELPWYRSIFERF"
FT   gene            1127382..1127771
FT                   /locus_tag="C1336_000250249"
FT                   /note="C1336_000250249 identified by Glimmer3 with a raw
FT                   score of 8.14."
FT   CDS             1127382..1127771
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250249"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250249 identified by Glimmer3 with a raw
FT                   score of 8.14. Gene function extrapolated from
FT                   CJJ81176_1093 (CP000538.1) after blastn alignment (99.49
FT                   percent identity over a 390 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30981.1"
FT                   /translation="MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLINP
FT                   YLIRPDYEFDIPTYYQELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNNTM
FT                   VQVILDTVNYPDFFQADQIANYIKK"
FT   gene            1127771..1128502
FT                   /locus_tag="C1336_000250250"
FT                   /note="C1336_000250250 identified by Glimmer3 with a raw
FT                   score of 12.52."
FT   CDS             1127771..1128502
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250250"
FT                   /product="pyrroline-5-carboxylate reductase"
FT                   /note="C1336_000250250 identified by Glimmer3 with a raw
FT                   score of 12.52. Gene function extrapolated from C8J_1017
FT                   (CP000814.1) after blastn alignment (98.63 percent identity
FT                   over a 732 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30982.1"
FT                   /translation="MLYILANGAMATALAYGLKDNYEICIVGRSIEKLQALTKEGFKTL
FT                   LYKDFNIEGKDVILAFKPYALENIAQMLKGQARILISVLANVDFEKLQTIKAQNYVRIM
FT                   PNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPAFLA
FT                   LIAESIANAGVYEGLSKELSLNLTRSLFKSSSTLLEHEHPAIIKENICSPGGVTIKGIK
FT                   ILEQKGIRGSFFEAINASSAK"
FT   gene            1128499..1128801
FT                   /locus_tag="C1336_000250251"
FT                   /note="C1336_000250251 identified by Glimmer3 with a raw
FT                   score of 4.84."
FT   CDS             1128499..1128801
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250251"
FT                   /product="transformation system protein"
FT                   /note="C1336_000250251 identified by Glimmer3 with a raw
FT                   score of 4.84. Gene function extrapolated from
FT                   CJJ81176_1095 (CP000538.1) after blastn alignment (98.68
FT                   percent identity over a 303 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30983.1"
FT                   /translation="MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLY
FT                   KLQEELYEKPIFKTIILQTSALKPIILQEQFVNDGIFQFQKLYFQDQNYSVYFKE"
FT   gene            1128798..1129460
FT                   /locus_tag="C1336_000250252"
FT                   /note="C1336_000250252 identified by Glimmer3 with a raw
FT                   score of 6.30."
FT   CDS             1128798..1129460
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250252"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000250252 identified by Glimmer3 with a raw
FT                   score of 6.30. Gene function extrapolated from C8J_1019
FT                   (CP000814.1) after blastn alignment (98.92 percent identity
FT                   over a 371 bp alignment).; overlaps another CDS with the
FT                   same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30984.1"
FT                   /translation="MSKAFTLFELTISLILFTFIASLLSKPLMDFYHLNFTALHTNNLI
FT                   TQTHLNLLKIEKLIQNCINITFSQNTLKCLLKDELISLKDNKLYLINSALILENNHTLY
FT                   SPHSDFKTQLQNRKDLYNDNEHIGYAYKINKVEKISILENGISTNFTGSFIPLQAQLVI
FT                   KLQNEELIYEIKPKFNEQLNQQGLISKNISSFNLQNNKLKICLKRQAKYCLEKRILL"
FT                   /artificial_location="low-quality sequence region"
FT   gene            1129457..1129909
FT                   /locus_tag="C1336_000250253"
FT                   /note="C1336_000250253 identified by Glimmer3 with a raw
FT                   score of 6.73."
FT   CDS             1129457..1129909
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250253"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000250253 identified by Glimmer3 with a raw
FT                   score of 6.73. Gene function extrapolated from Cj1079
FT                   (AL111168.1) after blastn alignment (98.71 percent identity
FT                   over a 387 bp alignment).; overlaps another CDS with the
FT                   same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30985.1"
FT                   /translation="MKKAYVLIWTIFLILLISLWMSLTLNISSYTPKIIQDSYYYLQAQ
FT                   ILSHNATQFSKYFLYQAKQENKECLDNIYFNYTKALIKIKYFYPIAQCVNFKFSNFNPD
FT                   ANLSKDGVIIAHISIALNRDKNVNDEILLTKSIIIYPKENFWNLKN"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1129906..1130535)
FT                   /locus_tag="C1336_000250254"
FT                   /note="C1336_000250254 identified by Glimmer3 with a raw
FT                   score of 13.52."
FT   CDS             complement(1129906..1130535)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250254"
FT                   /product="uroporphyrinogen-III synthase"
FT                   /note="C1336_000250254 identified by Glimmer3 with a raw
FT                   score of 13.52. Gene function extrapolated from CJE1223
FT                   (CP000025.1) after blastn alignment (97.49 percent identity
FT                   over a 399 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30986.1"
FT                   /translation="MKIYLLNETPFKGVENLILNEIVFYDFSIDLSLYDALICTSKNAL
FT                   KALQHAKTTLNFKLNLYAVGQSTAQYAKNLGFKKIKIPSKAYGKDLFLEFKEELKTQKC
FT                   LYLRAKNIVSTLNLDLKNAGVDLDEMIVYKNVFKKGDKKLTHPAIFIFTSPLSVENFFK
FT                   FYSVKEEDKIVAIGQSTAKKLLNFKNLYICENQSLLECVKLAKTLV"
FT   gene            complement(1130513..1131145)
FT                   /locus_tag="C1336_000250255"
FT                   /note="C1336_000250255 identified by Glimmer3 with a raw
FT                   score of 17.03."
FT   CDS             complement(1130513..1131145)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250255"
FT                   /product="thiamine-phosphate pyrophosphorylase"
FT                   /note="C1336_000250255 identified by Glimmer3 with a raw
FT                   score of 17.03. Gene function extrapolated from
FT                   CJJ81176_1099 (CP000538.1) after blastn alignment (97.00
FT                   percent identity over a 633 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30987.1"
FT                   /translation="MKNKLDLSLYLVASQGNKSEECFLNTLENAIKGGVSIIQLREKEL
FT                   NAREFYKLGLKVQKLCKAYKIPFLINDRVDIALALDADGVHLGQEDLEVKLARKLLGDE
FT                   KIIGLSLKKLEQLEFIQGANYLGCGAIKATPTKESSLLSLELLSQICDKSPIGVVAIGG
FT                   IDKEALIELKGINLSGVAVVRAIMDAKDAFLAAKELKCKIYENLSLE"
FT   gene            complement(1131135..1131947)
FT                   /locus_tag="C1336_000250256"
FT                   /note="C1336_000250256 identified by Glimmer3 with a raw
FT                   score of 15.50."
FT   CDS             complement(1131135..1131947)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250256"
FT                   /product="phosphomethylpyrimidine kinase"
FT                   /note="C1336_000250256 identified by Glimmer3 with a raw
FT                   score of 15.50. Gene function extrapolated from
FT                   CJJ81176_1100 (CP000538.1) after blastn alignment (98.77
FT                   percent identity over a 813 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30988.1"
FT                   /translation="MKAKGSELIPVLTIAGSDCSGGAGIQADLKTFSAHNLFGMSVVLS
FT                   VVAENTARVISVHDIPTQSVDEQMLAVFEDIVPKATKIGMIGSCELMSCVAKNLSEFKP
FT                   QNVVIDPVMFAKNGYALMPQENCDFFKQTIVKFADILTPNIPEAEFLCGFKIANEEQMI
FT                   KAAKHLCSLGAKAVLLKGGHSEENANDVLYDGKEIYILKGERIETKNTHGTGCTLSSAI
FT                   AGNLAKGKDLFHAVSEAKEYVRNAIYYSLNLGKGCGPTNHFFKFLDEK"
FT   gene            complement(1131944..1132630)
FT                   /locus_tag="C1336_000250257"
FT                   /note="C1336_000250257 identified by Glimmer3 with a raw
FT                   score of 16.78."
FT   CDS             complement(1131944..1132630)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250257"
FT                   /product="possible nuclease"
FT                   /note="C1336_000250257 identified by Glimmer3 with a raw
FT                   score of 16.78. Gene function extrapolated from C8J_1024
FT                   (CP000814.1) after blastn alignment (98.43 percent identity
FT                   over a 510 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30989.1"
FT                   /translation="MTGAQIFTKLLNLDLNYHDFDWLENQGLNEFELLISVILTQNTNW
FT                   KNVLKALENLKKENIASLEQINTLSNLELATLIKPSGFYNTKAKRLKGLVESIINTYEN
FT                   LENFKTNVSREWLLNIKGLGFESVDGILNYLCKREILVVDNYSLRLAFHLGYEFENYEE
FT                   LREFFQSGIESEQENLCKILGRKCELYELYQIFHALIVAFAKQSFKGQKLSPKGEEWIK
FT                   ILKEDL"
FT   gene            complement(1132627..1133388)
FT                   /locus_tag="C1336_000250258"
FT                   /note="C1336_000250258 identified by Glimmer3 with a raw
FT                   score of 12.99."
FT   CDS             complement(1132627..1133388)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250258"
FT                   /product="putative ATP/GTP-binding protein"
FT                   /note="C1336_000250258 identified by Glimmer3 with a raw
FT                   score of 12.99. Gene function extrapolated from Cj1084c
FT                   (AL111168.1) after blastn alignment (97.51 percent identity
FT                   over a 762 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30990.1"
FT                   /translation="MDWNKTYAAIYRARKDYLKPIFEIDPITLKDLVAMESQKKALYEN
FT                   TLNFIQNKGANHALLWGSKGTGKSSLIKAIFNEFKDQGLRLVELNKEDLFALADIIDEI
FT                   RLENFKFILFCDDFSFEKGDDSYKFLKPLLEGNIEKAPNNVIIYASSNRRHLLSESIID
FT                   NLDTQIAHTELHLSEAAEERLSLSDRFGLWLSFYQGNLEEYLKMIDFYFKDYSCDKELL
FT                   HTKAKEFATLRASRSGRTAKQFYLAFKENFK"
FT   gene            complement(1133390..1136326)
FT                   /locus_tag="C1336_000250259"
FT                   /note="C1336_000250259 identified by Glimmer3 with a raw
FT                   score of 15.04."
FT   CDS             complement(1133390..1136326)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250259"
FT                   /product="transcription-repair coupling factor"
FT                   /note="C1336_000250259 identified by Glimmer3 with a raw
FT                   score of 15.04. Gene function extrapolated from CJE1228
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 221 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30991.1"
FT                   /translation="MQASFYEYLQNPKICELLLCKDEKQADLLAQVSRFKGLKTFVLPD
FT                   FRAQFGDDLRAFSKELFNLCKILNAYHKEEEKKILISPLNTVLKKLPSKKHLQNYYIDK
FT                   KQNFDLKCFEDEISRLGYEFVDIVQDKGEISIRADIIDIFCINEENPIRILLFGEEIES
FT                   IRYFDLQSQKSIPNELEHFEICPFLKYFDKENYEIFKDKLEDFQSDTLIHDINSLGFWC
FT                   IDDFFDYLELDFLACEKFDINEYEKDISFVNAKILPQAKKFKELQSSYNKDFFEFHKNK
FT                   KITLLAKNEALFKALELEDTQNIHFVKSDLRLNLISPEELIISLNQKEKQKTRKKASLI
FT                   IDELKNGDYIVHEDYGVGKFLGLEMIVISGAKKEFVAIEYQNSDKLLLPVENLYLIDKY
FT                   LGVSGSIPSLDKLGKTSFIKLKEKLKTKLLAIASEIVIMAAKRSLVQAKKITVDLNRQA
FT                   DFITSAGFIYTSDQEKACHEILQDFQSGKVMDRLLSGDVGFGKTEVAMNAIYPVVKSGF
FT                   CAFLFAPTTLLSHQHYKTLKKRFDPFDIKVFKLDRFTSSAEKKQVLQNLKENKACVVVG
FT                   THALLSVECENLALVIIDEEHKFGVKQKEKLKEITQNSHILSMSATPIPRSLNQALSSI
FT                   KSYSVLQTPPEDRMDVRTFVKENDDALLKEAIARELRRGGQIFYIHNHIASIEQCKKHL
FT                   LELFSTLRILILHSKIDAKVQEEEMLKFENKEYDLLLSTSIVESGIDLPNANTIIVEKS
FT                   DRFGMADLHQLRGRVGRSDKQGYCYFLIEDKNAITKDALKRLVSLESNSFLGAGSVLAY
FT                   HDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDELNALSKNEVDQKENKLDLKLNVNA
FT                   FLNSELISEDRLRLELYRRLSKCEQVHEVYEIEGEIEDRFGKLDVYTKQFLSLIIIKIL
FT                   ALNKFKSISNYEQNIQFTALNDEKELIKAKSKDDDDILEAILMHLRKA"
FT   gene            complement(1136326..1136721)
FT                   /locus_tag="C1336_000250260"
FT                   /note="C1336_000250260 identified by Glimmer3 with a raw
FT                   score of 9.78."
FT   CDS             complement(1136326..1136721)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250260"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250260 identified by Glimmer3 with a raw
FT                   score of 9.78. Gene function extrapolated from C8J_1027
FT                   (CP000814.1) after blastn alignment (99.24 percent identity
FT                   over a 396 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30992.1"
FT                   /translation="MAIFNKGGISPTSSPSSETTVISSGARIEGKFYFASMLHVDGELS
FT                   GIIHSESIVVIGKNGNLKGELQADKIVVNGYFEGQLEANSLEILAGGVVNGDISTQKIS
FT                   IENGGRFNGTSKIKEDTIKLIENNNEE"
FT   gene            complement(1136658..1137560)
FT                   /locus_tag="C1336_000250261"
FT                   /note="C1336_000250261 identified by Glimmer3 with a raw
FT                   score of 8.91."
FT   CDS             complement(1136658..1137560)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250261"
FT                   /product="peptidase, M23/M37 family"
FT                   /note="C1336_000250261 identified by Glimmer3 with a raw
FT                   score of 8.91. Gene function extrapolated from C8J_1028
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 75 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30993.1"
FT                   /translation="MVKNKFTITITDINGSRHFYLNQIIKKIVFYTIAFIVLFLVFSGF
FT                   YIKYLDSKLSDISEKREELLKKSKELELSNSQMQKSIEEKTQQYAAIEDKIASFEEALG
FT                   LEAENNLTISARLDNLQLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRREFH
FT                   PGIDLRAEIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEVVKAG
FT                   QFVSKGQLIGYSGNTGLSTGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQERRVPW
FT                   QSLIKAVSAQHPVLAQKQQ"
FT   gene            complement(1137547..1138707)
FT                   /locus_tag="C1336_000250262"
FT                   /note="C1336_000250262 identified by Glimmer3 with a raw
FT                   score of 9.98."
FT   CDS             complement(1137547..1138707)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250262"
FT                   /product="FolC protein"
FT                   /note="C1336_000250262 identified by Glimmer3 with a raw
FT                   score of 9.98. Gene function extrapolated from C8J_1029
FT                   (CP000814.1) after blastn alignment (99.07 percent identity
FT                   over a 644 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30994.1"
FT                   /translation="MKVENFLAQKSINYDKIDRFLMFRMYEKYKKYFKNIPIIQLIGTN
FT                   GKGSTGRYLTQLLENLNYKIGHYTSPHIFSFNERFYLDGKIANDEELEQAHIRLEEIFK
FT                   QDLQKLSYFEYATFLAMILFQKCDFIVLEAGVGGEYDATSVFERRMNIFTRIGFDHIQI
FT                   LGNSLEDIARTKLKVMATIALISDEQEQNVLNLAKKIAFLKKANLQVSSLNPFLKENFE
FT                   IYCKKFALPCFLKHNLKLALKACEILTSQEKTLEALKKLQELNLQGRCQEISPNFFVDV
FT                   GHNPMAAKAMLDKFQGEKINLIYNAYLDKDIFQILNALKPIIDTIQIYKYKSAERKLAD
FT                   DEIYSIASKLGIQCKEFVKLEENKKNLVFGSFMLVENFLKEWCGKK"
FT   gene            complement(1138697..1140094)
FT                   /locus_tag="C1336_000250263"
FT                   /note="C1336_000250263 identified by Glimmer3 with a raw
FT                   score of 8.49."
FT   CDS             complement(1138697..1140094)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250263"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250263 identified by Glimmer3 with a raw
FT                   score of 8.49. Gene function extrapolated from C8J_1030
FT                   (CP000814.1) after blastn alignment (99.13 percent identity
FT                   over a 230 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30995.1"
FT                   /translation="MIPNTNEIAKQTLIALKERKLKPTPENYTEIFEELSLKYGITSSN
FT                   KAKLDKYKTLLLPIYQQELNSKTIRSLEELISFLISVLNRQSGKQFSEFFDFLYTISKT
FT                   LQISKDKKIRDLAKVTSIRISKTMDSESIYLLTKKWKELERNYDENNLEEQARKYGISK
FT                   YDDYDSVIKKLLVKLEERSYEHFSELLCLGLNPSLVEDLKIQGFIQNLTQKPFVIGEEN
FT                   FKNELMEFINHRIMVDNMYVQKNLNFFNDNLKKIYELLVLLNKSNEQNMDFINTLKPDE
FT                   NGEVKLSFEDLKLKFKQLGEKITSLNNQIEFTQSLEEREAWSVLKELDKMDENFNKYKV
FT                   NYSLALFSIVNYRFIMEKYGMGSLNEIFVRFKKILKDSCSEFDELWMIDEKSYLIVSPG
FT                   KSKDEITQLVNTNLKTIENFRFIYKQDIITPKIHVAYLDKQSKPSINILDELIKQIAAV
FT                   NEQYNES"
FT   gene            complement(1140078..1140590)
FT                   /locus_tag="C1336_000250264"
FT                   /note="C1336_000250264 identified by Glimmer3 with a raw
FT                   score of 7.05."
FT   CDS             complement(1140078..1140590)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250264"
FT                   /product="putative lipoprotein"
FT                   /note="C1336_000250264 identified by Glimmer3 with a raw
FT                   score of 7.05. Gene function extrapolated from C8J_1031
FT                   (CP000814.1) after blastn alignment (99.22 percent identity
FT                   over a 513 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30996.1"
FT                   /translation="MKKILIFCIGLFLGACGYVPTSKIANNIFDEKVYVNVELSQQDPK
FT                   NSIYVADTLKEMVISKLGRKLALKHEADDVINVKMNNLEFIPLAYDKNGYVISYKAKLN
FT                   LDFNVVFKDGSSQAFSTSGSYNFEISPNSIISDSARYEAIRAASSEAFDEFISVIAIKG
FT                   QKRDSKY"
FT   gene            complement(1140587..1143016)
FT                   /locus_tag="C1336_000250265"
FT                   /note="C1336_000250265 identified by Glimmer3 with a raw
FT                   score of 15.33."
FT   CDS             complement(1140587..1143016)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250265"
FT                   /product="leucyl-tRNA synthetase"
FT                   /note="C1336_000250265 identified by Glimmer3 with a raw
FT                   score of 15.33. Gene function extrapolated from CJE1234
FT                   (CP000025.1) after blastn alignment (99.56 percent identity
FT                   over a 228 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30997.1"
FT                   /translation="MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSGR
FT                   IHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYENIA
FT                   YMKKELFSLGFSFSKKRMLATSDPLYTKFEQEFFIKMFEKGLIYTKEANVNWCEQDQTV
FT                   LANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEELLKDLEELKDKWPNQVLTMQENW
FT                   IGKSEGLEFSLNLDEESKQKTKESSLEVFTTRADTIYGVSYIALAPEHKIVQNLLSQNL
FT                   LNQDVLNKIKAIQNQSPRERQSSEKEGYFLGIYAIHPLSGEKIPLWVANFVLADYGSGA
FT                   VMAVPAHDERDFEFATKYNLAIKQVIQTQENLPYTQKSGKLIHSQEFDNLDCNEARLKI
FT                   ISQFEAKNIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQICGIVPQKLENLPITLPEDV
FT                   QITGEGNPLDKHPTWKNCICPKCGKEAQKESDTLDTFFESSWYFARFASDERTWQEKAL
FT                   DEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRLLTQGMVLKD
FT                   GAKMSKSKGNVVDPDEIIEKYGADTARLFILFAAPPAKELEWNDDAVEGAYRFICKLYD
FT                   RAQNVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNA
FT                   LALCKNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKKLELKEEVFVKDTLNL
FT                   AVSINGKKRVEFEISSSASKEEILAFAKENTAKWLEGKSIVKEIYVEGKLVNLVIK"
FT   gene            complement(1143026..1143997)
FT                   /locus_tag="C1336_000250266"
FT                   /note="C1336_000250266 identified by Glimmer3 with a raw
FT                   score of 13.83."
FT   CDS             complement(1143026..1143997)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250266"
FT                   /product="protein-export membrane protein SecF"
FT                   /note="C1336_000250266 identified by Glimmer3 with a raw
FT                   score of 13.83. Gene function extrapolated from
FT                   CJJ81176_1110 (CP000538.1) after blastn alignment (98.98
FT                   percent identity over a 787 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30998.1"
FT                   /translation="MQFFSEKKIYDFMRMRFTAISLSFILFFGSIYLLWDRGLQYGIDF
FT                   SGGTLVQLKYENAAPITQIREILEKQGTFQNLSVTEFGSNEEVTIRFLGSNDNVSNDIG
FT                   EHISTLLKDTGKFEVRRADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRFALA
FT                   AIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKTSKKT
FT                   ELAPIINESVSATLSRTVLTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGTLSSIF
FT                   VASPTLLWFKFSVLEFRNKEIEKAKRKQDKERNRAMYEKGTV"
FT   gene            complement(1143997..1145577)
FT                   /locus_tag="C1336_000250267"
FT                   /note="C1336_000250267 identified by Glimmer3 with a raw
FT                   score of 14.08."
FT   CDS             complement(1143997..1145577)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250267"
FT                   /product="protein-export membrane protein SecD"
FT                   /note="C1336_000250267 identified by Glimmer3 with a raw
FT                   score of 14.08. Gene function extrapolated from
FT                   CJJ81176_1111 (CP000538.1) after blastn alignment (98.93
FT                   percent identity over a 1495 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30999.1"
FT                   /translation="MRNSKINYRLIIFIAVFIFGVTFSLPSFLQSERGAKINLGLDLQG
FT                   GLYMLLGVDNEEAVKSKIKSIASSLSYSFNKENILNDGLNTHDDILEFTLLDNADIAKV
FT                   ENLLKEIKGINIQSENMHYKISFTSEEVKNIENFALLQAVETIRNRLDQFGLAEPTVAK
FT                   QGDDKILVELAGIKTKEDELRAKERITKAAHLQLMEVDDSKMGQASTMSDAEAASYGLI
FT                   LVPDSRNPNLKYTLKSIPILDGSMLTDARVGISDKSNYPVINFTLNAEGSKKFADYTGA
FT                   NVGKRLAIVLDNKVYSAPSINERIGGGSGQISGAFTQEEARDVAVALRSGALLAPVKLL
FT                   EQRSIGPSLGADSIKMSMIALIGASVFIVIFMMMYYGVAGIFANIAMLVNVLVVVAVMA
FT                   MFGATLTLPGMAGLVLTVGMAVDANVIINERIRELLRDGVNIRASIEQGYKNAMSAIID
FT                   SNITSLVTSVALYAYGTGAVKGFAVTLGIGIVVSMITAILGTHGMFDYFMQRIEKSNNT
FT                   RFWFGYRRR"
FT   gene            complement(1145570..1145842)
FT                   /locus_tag="C1336_000250268"
FT                   /note="C1336_000250268 identified by Glimmer3 with a raw
FT                   score of 7.98."
FT   CDS             complement(1145570..1145842)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250268"
FT                   /product="preprotein translocase, YajC subunit"
FT                   /note="C1336_000250268 identified by Glimmer3 with a raw
FT                   score of 7.98. Gene function extrapolated from
FT                   CJJ81176_1112 (CP000538.1) after blastn alignment (99.63
FT                   percent identity over a 273 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31000.1"
FT                   /translation="MAENSILTSLLPLVVLFAIFYFLVIRPQQKQAKAHKQMLESLQKG
FT                   DKIITNGGLICEVVKPEEDFIKVKLNEDNVTAKISREFIAKKIDA"
FT   gene            1145815..1147128
FT                   /locus_tag="C1336_000250269"
FT                   /note="C1336_000250269 identified by Glimmer3 with a raw
FT                   score of 6.17."
FT   CDS             1145815..1147128
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250269"
FT                   /product="putative apolipoprotein N-acyltransferase"
FT                   /note="C1336_000250269 identified by Glimmer3 with a raw
FT                   score of 6.17. Gene function extrapolated from Cj1095
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 90 bp alignment). Functional
FT                   classification-Membranes, lipoproteins and porins."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31001.1"
FT                   /translation="MKLKLNFLPYFSFIPKKLNTNSIIFKIIKVFFIAILLSNSIYLSF
FT                   FENIFTQTISPFLAIYGLVLLLKSKNSKQYFWIGFFVGILWFWWIGLSSIYFNLNYLVP
FT                   IIPIIIGFIYGLLFRLCYLLKFDFLRLCGIFCISFIHPLGFDWLNWGIFTVYGFFDPSY
FT                   RGIICIFLIAYFIYEGYISRYYKIAIVLILFFSGFQYNEKQAQTLNLNYKLINTNISQD
FT                   QKFLQENLKSNSDILIQDIFQAINEKKELVILPETAFAFDLKNTKYELMLKELSYKITI
FT                   ITGAFYTEKEHTYNSTYIFKKGNVYILNKHFLVPFGEEIPFFKDLIKKYFLKNIEEFSQ
FT                   GPIQSKYKLDNQIITNAICYEATKEQNYQNSQIIIALSNNAWFNNSSEYKLQQLLMKFY
FT                   ASKYGVSVYHATNGKENIVILPKKLLSKDWKKFIQRNI"
FT   gene            complement(1147378..1148574)
FT                   /locus_tag="C1336_000250270"
FT                   /note="C1336_000250270 identified by Glimmer3 with a raw
FT                   score of 11.59."
FT   CDS             complement(1147378..1148574)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250270"
FT                   /product="S-adenosylmethionine synthetase"
FT                   /note="C1336_000250270 identified by Glimmer3 with a raw
FT                   score of 11.59. Gene function extrapolated from Cj1096c
FT                   (AL111168.1) after blastn alignment (96.99 percent identity
FT                   over a 1197 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31002.1"
FT                   /translation="MYLFTSEVVSAGHPDKCADIIADTIVDILLKNDKNSRVASEVFVA
FT                   GNKVVIGGEVKSNHKLSKADYDNLVKDVLKNIGYDGAGHFNKEQCLHPDEVDVMVFLNE
FT                   QSPDINQGVDQEDGETGAGDQGIMFGFASCEAEEYMPAAISYARMLCDKVYAYAKANPH
FT                   ELGVDIKTQVTIDYGTKANFENCKPQSIHTIVVSAPCVESMKIEDLRSLVMKLILDSNL
FT                   PKELFDPNKTRILINPTGKYINHSSLHDSGLTGRKLIVDSFGGYSPIGGGAQSSKDYTK
FT                   VDRSGLYAGRWLAKNIVAAGLAKKCIVQLSYAIGVAKPTSVSVDCMGTNTSVNDDVLSD
FT                   FVMQNFSLTPNWIRDKFHLDKPSKETFLYADVAARGQVGQKDYPWEQLDALEQFKKLL"
FT   gene            1148714..1149937
FT                   /locus_tag="C1336_000250271"
FT                   /note="C1336_000250271 identified by Glimmer3 with a raw
FT                   score of 12.69."
FT   CDS             1148714..1149937
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250271"
FT                   /product="sodium/dicarboxylate symporter"
FT                   /note="C1336_000250271 identified by Glimmer3 with a raw
FT                   score of 12.69. Gene function extrapolated from
FT                   CJJ81176_1115 (CP000538.1) after blastn alignment (98.44
FT                   percent identity over a 768 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31003.1"
FT                   /translation="MFSKIIQSYAKGNLIVQICIGIVLGILIGISSKEISEIANLLGIL
FT                   FTSALKAIAPMLVFILILTSICTKDFSQSGAKIKNIIILYIVGTFLASACAVLANFFFP
FT                   IKLVLDGVQTATNSSPTHMSEIFKDLLFKIVDNPINALSSGNYLGILTWAIAGGIALKH
FT                   CSNEAKQVFIDINEGVLKIVKFIVKLAPFGIFGLVANSVAQTGAQGLLSYVKLLILLVA
FT                   TMLFVTFVINALIVFFYTRKNPFPLIFICLRHSAFFAFFTRSSAANIPVNMALCAKLGI
FT                   DKEFYGISIPLGATINMAGAAVTIAILSLTAANTVGIEISLLQAFLLSIIATFAACGAS
FT                   GVAGGSLLLIPLACSLFNIDYDIAMKVVAIGFIIGVIQDSVETALNSSTDVLFTAICSK
FT                   NELNYNIK"
FT   gene            1149947..1150834
FT                   /locus_tag="C1336_000250272"
FT                   /note="C1336_000250272 identified by Glimmer3 with a raw
FT                   score of 11.44."
FT   CDS             1149947..1150834
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250272"
FT                   /product="aspartate carbamoyltransferase"
FT                   /note="C1336_000250272 identified by Glimmer3 with a raw
FT                   score of 11.44. Gene function extrapolated from C8J_1039
FT                   (CP000814.1) after blastn alignment (98.31 percent identity
FT                   over a 888 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31004.1"
FT                   /translation="MRHLITTKDFNKVEIMELFKEASDFLDEKPRTFLEGKSITTIFFE
FT                   NSTRTLSSFESAARRLGARVLRLDVSRSSSSKGETLYDTAANLDAMSPNAIVIRHANSG
FT                   VPLILAKHMHCPVVNGGDGKHAHPTQALLDLFTIYNHFQGDVEGKKICIVGDIKNSRVA
FT                   ASNIELLSRFNLDITLVAPPHFMPNTHLKKHYKLDENIIANSDIIMSLRTQTERHNKTV
FT                   YASLKDYANDFCIQKSLVKDKKLILLHPGPVNRNIDISDEMMSDERTLVLKQVKNGVAI
FT                   RMAVLKKLILENEG"
FT   gene            1150838..1152559
FT                   /locus_tag="C1336_000250273"
FT                   /note="C1336_000250273 identified by Glimmer3 with a raw
FT                   score of 13.48."
FT   CDS             1150838..1152559
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250273"
FT                   /product="oligoendopeptidase F"
FT                   /note="C1336_000250273 identified by Glimmer3 with a raw
FT                   score of 13.48. Gene function extrapolated from CJE1242
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 563 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31005.1"
FT                   /translation="MLEWDLSALFHDKEALQNFTQDQIQQSLNFKKNYENKLYTLNANE
FT                   FLQALKDYEILNQALGKIMTYTYLLFAKNTQNGSFYAQYEEECKKIEENLLFFELEFCE
FT                   LAPEKSQKFTTFCKDYDFYLSNLLQNKRYNLSKNEERIMLYLSNTGANAFSRLFDESMS
FT                   ALKIPFEGKKLSEEEVLSKMYDEDRKIRKKAAKKFSKVLQKNSRLLSFIINMIKTERKN
FT                   ISLLRGYENAEISRHISNQISQKSVDSLIASAQKHFNLVSQFYKRKKQILGYDELKDYD
FT                   RYAPIGKEASFDFKTSKNIVLEAFQAFSPQFYDIAKNAFDQGWIDVYPQENKQGGAFSH
FT                   SATSDAHPFVLLNYTDKRRDLFTLAHELGHTIHQKLSYNVSYLNQNTPLTTAETASVFA
FT                   EMLVFDFIKDKLKKEELLSLYANKIEDIFATFYRQINFTCFERRLHAQENELSTEEINK
FT                   IWMEESQKMFQDSVKLTKNYASWWSYIPHFIHSPFYCYAYAYAQLLVLALYGLYKSKKC
FT                   ENFKELYIKMLSLGGSVSPKELVGMFGFDIEDENFWEIGIKEIQKLINEFMELQSC"
FT   gene            1152553..1152990
FT                   /locus_tag="C1336_000250274"
FT                   /note="C1336_000250274 identified by Glimmer3 with a raw
FT                   score of 12.61."
FT   CDS             1152553..1152990
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250274"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250274 identified by Glimmer3 with a raw
FT                   score of 12.61. Gene function extrapolated from C8J_1041
FT                   (CP000814.1) after blastn alignment (99.73 percent identity
FT                   over a 368 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31006.1"
FT                   /translation="MLETILKNENFIHTMQKHCYEVISHLIEENIEFSIVANTNFIDFN
FT                   PELPKELDVKQNPYALFALGGYTFESIQLNKDFIQFHAGFGNDDFDSFVKVDLGAITQI
FT                   QIENSILFVNFSLYKREDSKNLQKSKNIFLNNPKNKDIFKK"
FT   gene            1152987..1155062
FT                   /locus_tag="C1336_000250275"
FT                   /note="C1336_000250275 identified by Glimmer3 with a raw
FT                   score of 10.30."
FT   CDS             1152987..1155062
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250275"
FT                   /product="ATP-dependent DNA helicase, UvrD/REP family"
FT                   /note="C1336_000250275 identified by Glimmer3 with a raw
FT                   score of 10.30. Gene function extrapolated from CJE1244
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 100 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31007.1"
FT                   /translation="MNLFEDLNYSQKQAVSHIDGAMLILAGAGSGKTKTITTRLAYLIG
FT                   EVGIPSHNTLTLTFTNKAASVMRHRALNFLQGNHNPLLCTFHKFGLLFLKLHFERLERK
FT                   NSFIVIDTDDTKKIIKDLIHDKNKDNVYDIIKYISYCKNEGKRVSNVFEDLNLLKEHNF
FT                   EKYQNEYKFANYYRAYEEYLLKQNFVDFDDLLLLSNLILENDINFAKEQSLLYNYITVD
FT                   EYQDTNTLQYKILKNLCCMHENITVVGDDDQSIYSWRGAKIENILNFQNDFKNVKLVKL
FT                   EQNYRSVGTILQAANNLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLYIAQEVK
FT                   KLLNSGVEAKEIAILFRVNALSRAIEEAFMKKQISYKLLSGMRFYERLEIKDLISYLRL
FT                   ILNPNDDLSFRRIINRPKRSIGEKALKNLEEYAKKRQISLFDALCESDGGVGILTTKKA
FT                   QNEANIFIQNIHTLKSYDNAKKVFDNIEELFKIKDYFSEQDDGDERIRNLDEFYANLRE
FT                   KLKEDPEASLEDLLSEISLLSDQDNLDEECVCLMSIHASKGLEFDYVFIIGFDEGFFPL
FT                   NSEENLEEERRLAYVAITRAKKFLTISVANSRFYHGSRANINPSRFLEESKLINEKSKN
FT                   QNIQKTSFCKGNLVKHKIFGIGRVVEVNKSGKEEKLNINFGGIMRVIMASFVEKAV"
FT   gene            1155059..1155877
FT                   /locus_tag="C1336_000250276"
FT                   /note="C1336_000250276 identified by Glimmer3 with a raw
FT                   score of 10.87."
FT   CDS             1155059..1155877
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250276"
FT                   /product="tRNA pseudouridine synthase B"
FT                   /note="C1336_000250276 identified by Glimmer3 with a raw
FT                   score of 10.87. Gene function extrapolated from CJE1245
FT                   (CP000025.1) after blastn alignment (99.35 percent identity
FT                   over a 153 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31008.1"
FT                   /translation="MNKIFAAFKPRGLSSNAFLSTLKKKYKNKKAGYSGTLDPFAKGVL
FT                   IVAFGQYTKLFRFLKKTPKTYKATLWLGVYSLSLDDQNIKEIQNIKEFDLANLKQIIDQ
FT                   MQGIISYTPPQFSAKRINGTRAYELAKKGIEAILKPCQMEVFDCKILSYNHPFLNIEIT
FT                   VSEGAYIRSYCELFARKLGINATLSSLERIKEGKFVYNNEKSLNVLKYINLKPNFIKDL
FT                   NKLENGAKIFVEELEFHDEGDYYIETEKYFSIINIKENTVKYLLNKVEKC"
FT   gene            1155871..1156098
FT                   /locus_tag="C1336_000250277"
FT                   /note="C1336_000250277 identified by Glimmer3 with a raw
FT                   score of 9.51."
FT   CDS             1155871..1156098
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250277"
FT                   /product="carbon storage regulator-like protein"
FT                   /note="C1336_000250277 identified by Glimmer3 with a raw
FT                   score of 9.51. Gene function extrapolated from C8J_1044
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 228 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31009.1"
FT                   /translation="MLILSRKENESIIIGEGIEIKVVQTGKGYAKIGIEAPKSLMILRK
FT                   ELVQQVKDENLHSVVQNDIKLDDLSKKLIK"
FT   gene            1156095..1156862
FT                   /locus_tag="C1336_000250278"
FT                   /note="C1336_000250278 identified by Glimmer3 with a raw
FT                   score of 9.97."
FT   CDS             1156095..1156862
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250278"
FT                   /product="4-diphosphocytidyl-2-C-methyl-D-erythritol
FT                   kinase"
FT                   /note="C1336_000250278 identified by Glimmer3 with a raw
FT                   score of 9.97. Gene function extrapolated from C8J_1045
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 109 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31010.1"
FT                   /translation="MKAYAKANIFLKLTGFDSRKYHLLESRFILLKDLFDELELVDKES
FT                   DSKKEFEIISNFKCENNIIQKAYLLLSKRYNNELKELFSKKSLKLTKNIPVCAGLGGGS
FT                   SDCASFLLLMNETLNLKLNLQELINLSMQLGSDIAFFLSGFHSADVSGCGEIIKEFEDD
FT                   IPNLKWTFPQISCQTKAVYDEFDRGIFDFQKNNNQAQIYKKLSTKELLQNFKNKELNDL
FT                   FTPCATLYPKMKSYLQEDFFLSGSGSSVFKVDR"
FT   gene            1156859..1157311
FT                   /locus_tag="C1336_000250279"
FT                   /note="C1336_000250279 identified by Glimmer3 with a raw
FT                   score of 12.61."
FT   CDS             1156859..1157311
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250279"
FT                   /product="small protein B-like protein"
FT                   /note="C1336_000250279 identified by Glimmer3 with a raw
FT                   score of 12.61. Gene function extrapolated from C8J_1046
FT                   (CP000814.1) after blastn alignment (99.56 percent identity
FT                   over a 453 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31011.1"
FT                   /translation="MKIIARNKKALFDYSIIERFEAGIVLKGSEVVALRAGRANLKDSF
FT                   VRIIKNEIFLLNSHISLLHTTHSFYKHEERGARKLLMHRKQIDKLLGKVSIEGYTIVAL
FT                   DLYFNTKNKVKATLALAKGKNLHDKRETLKKKQADLEARAAMKNYK"
FT   gene            1157322..1157924
FT                   /locus_tag="C1336_000250280"
FT                   /note="C1336_000250280 identified by Glimmer3 with a raw
FT                   score of 13.32."
FT   CDS             1157322..1157924
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250280"
FT                   /product="possible periplasmic thioredoxin"
FT                   /note="C1336_000250280 identified by Glimmer3 with a raw
FT                   score of 13.32. Gene function extrapolated from C8J_1047
FT                   (CP000814.1) after blastn alignment (99.83 percent identity
FT                   over a 593 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31012.1"
FT                   /translation="MKKILTLFLISLAFFLNACSKEEEIQNDFMFEEYHKGDKIVLNSV
FT                   NGGSKTLIRTDKGFVVEGEEGKVLMFDFFGTFCTPCKEEALDLSKLWKNNSSKFIIIGL
FT                   THFEDVSDETVKKFADDYGAYYFLSNGSSNDRIIAQILKDIDYQNMEQLPFKVVLKNGI
FT                   YQKISDYWNNNAPTNFYLGKIPTELMQEDLNKIYKGK"
FT   gene            1157924..1158214
FT                   /locus_tag="C1336_000250281"
FT                   /note="C1336_000250281 identified by Glimmer3 with a raw
FT                   score of 9.79."
FT   CDS             1157924..1158214
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250281"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250281 identified by Glimmer3 with a raw
FT                   score of 9.79. Gene function extrapolated from
FT                   CJJ81176_1125 (CP000538.1) after blastn alignment (99.31
FT                   percent identity over a 291 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31013.1"
FT                   /translation="MPKTQTLEQTKLSEPKMYKVILLNDDVTTMDFVIEILMNIFHQNL
FT                   EKASQTMLEIHHNGSGICGIYTQEIALSKQKKVIDAAKLANFPLQAKVEEE"
FT   gene            1158211..1160034
FT                   /locus_tag="C1336_000250282"
FT                   /note="C1336_000250282 identified by Glimmer3 with a raw
FT                   score of 9.34."
FT   CDS             1158211..1160034
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250282"
FT                   /product="ATP-dependent Clp protease ATP-binding subunit"
FT                   /note="C1336_000250282 identified by Glimmer3 with a raw
FT                   score of 9.34. Gene function extrapolated from Cj1108
FT                   (AL111168.1) after blastn alignment (99.80 percent identity
FT                   over a 509 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31014.1"
FT                   /translation="MKYQENLQKYLDNAKNLSLINHHEFVTCEHVLFALLKLSTDFKDI
FT                   FEEFSDGDLELLETELKNYISQNNQIIKQEIEPTISVVLDEILLSLKNKNNEIKIIDFL
FT                   EKLIHDSRSYSSYLLKKHNINLNKIQELQNHENIQNLSNHTSDLTLLAQNGKIDPLIGR
FT                   KFELERMMQILSRRKKNNPILVGEAGVGKTAIVEGLALAIAEKKVPKNLQNAKIFSLDM
FT                   ASILAGTKYRGDFEKRIKEILNELEKIPNAILFIDEIHTIVGAGSTGESHTDFSNLLKP
FT                   ALSNGTLKCIGATTFMEYKNTFDKNKPLSRRFAKINVDEPSQEESLQILKGLKNKYEEF
FT                   HHIKLNDEILQYAVIWGKKFFNDKFLPDCAIDLVDELGASFALNPKAKKNANLKDLENV
FT                   LAKMTHHHKMFEFDQNKALMNLKANLKAKIFGQDEVIDSLVSSLKQSFAGFKNSNTPRG
FT                   VFLFTGSSGVGKTELCKALAEFLGLNLERFDMSEYAEKHAISKLIGSPAGYIGFEEGGL
FT                   LSNAIRKNPFSLVLFDEIEKAHPDLSNTFLQIFDNAELTDNSGLKVDFKNTIIIMTSNL
FT                   GLKESNELGFLSKNEEKSNRAIKDFFCSRIY"
FT   gene            1159997..1160341
FT                   /locus_tag="C1336_000250283"
FT                   /note="C1336_000250283 identified by Glimmer3 with a raw
FT                   score of 9.99."
FT   CDS             1159997..1160341
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250283"
FT                   /product="ATP-dependent Clp protease, ATP-binding subunit
FT                   ClpA"
FT                   /note="C1336_000250283 identified by Glimmer3 with a raw
FT                   score of 9.99. Gene function extrapolated from
FT                   JJD26997_0614 (CP000768.1) after blastn alignment (99.38
FT                   percent identity over a 324 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31015.1"
FT                   /translation="MLSKIFFAPEFINRIDKILHFNDLNDAILVKIIEKELDEISKNLN
FT                   NIKLSVDDKAKIYLAKKAYNKEFGVRLLKRIISEEIGEKISDEILFGKLKKGGIAKIKL
FT                   GKNGKLEFIF"
FT   gene            1160316..1160963
FT                   /locus_tag="C1336_000250284"
FT                   /note="C1336_000250284 identified by Glimmer3 with a raw
FT                   score of 7.88."
FT   CDS             1160316..1160963
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250284"
FT                   /product="putative leucyl/phenylalanyl-tRNA--protein
FT                   transferase"
FT                   /note="C1336_000250284 identified by Glimmer3 with a raw
FT                   score of 7.88. Gene function extrapolated from C8J_1050
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 310 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31016.1"
FT                   /translation="MESSNLYSKLLNAPKNAPVFLSQNLEADFIVKAYTFGLFPWTSKP
FT                   VTWWCPDPRCILIPNQIHIQKNMKKFINLYQIKLDYDFLKLITLCRDTRSQSWIDDEFI
FT                   TTYYKLFTQGYAHSLELYENNELIGGIYGLILGKVFFGESMVSIKKNASKVAMIKLCDL
FT                   LKPYDFIIDCQVYNQHLEFMGAHNISRKEFLNILKEKCNQESGFKNFKDLIT"
FT   gene            complement(1160986..1162275)
FT                   /locus_tag="C1336_000250285"
FT                   /note="C1336_000250285 identified by Glimmer3 with a raw
FT                   score of 9.53."
FT   CDS             complement(1160986..1162275)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250285"
FT                   /product="methyl-accepting chemotaxis protein"
FT                   /note="C1336_000250285 identified by Glimmer3 with a raw
FT                   score of 9.53. Gene function extrapolated from C8J_1051
FT                   (CP000814.1) after blastn alignment (99.53 percent identity
FT                   over a 1290 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31017.1"
FT                   /translation="MFGAKKNNTEIIEQLEKKCNGLGDILRSIGNTMAVIEFTTDGVIL
FT                   EANQNFLTTMKYSLSEIKGKHHSMFCLPEVVNSSAYSDFWKDLRDGKARSGLFRRIAKG
FT                   GIDVYLEANYLPISDNNGHVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEFKPD
FT                   GTIITANENFLRTMDFNIDEIKGKHHSMFCDSNYRHSKDYVQFWEDLREGKFQSGKYIR
FT                   YGRNNKKVYLEASYNPVKNDDGKIYKVIKFATDISEQVKKDQEKLRLISELAEKNDNLT
FT                   QDGDRVIENTVSNVQNIADMMSQSSNLVSSLNQQSDEIKSIIQTISDIADQTNLLALNA
FT                   AIEAARAGEHGRGFAVVADEVRNLAERTGHSVNEITTTINSIRNVTSQVVESIKSGLED
FT                   VNQSVELAKEARECMEKIRESSAEVAKAMS"
FT   gene            complement(1162356..1162994)
FT                   /locus_tag="C1336_000250286"
FT                   /note="C1336_000250286 identified by Glimmer3 with a raw
FT                   score of 11.05."
FT   CDS             complement(1162356..1162994)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250286"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000250286 identified by Glimmer3 with a raw
FT                   score of 11.05. Gene function extrapolated from C8J_1052
FT                   (CP000814.1) after blastn alignment (97.58 percent identity
FT                   over a 414 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31018.1"
FT                   /translation="MFSSMGSELYLIFFAAITLLAILNPFGNLTQFLAMSDGLPLMLRK
FT                   KLFRTIVYTAFTIVLVFLLSGPLFMNYIFRVSLDDLRVSGGLVLIVMAIKNLLFSTKIV
FT                   TKDFSSYQDMDDKEILRQSLIPMAFPMLVGPGTLASIVVIAEDGGLDVALGGVMIAFIF
FT                   MFVLFHFAATIEKIVGKLILHVFSRIAQVFIAAMGFKMIIVGLKDIFNL"
FT   gene            complement(1162997..1163356)
FT                   /locus_tag="C1336_000250287"
FT                   /note="C1336_000250287 identified by Glimmer3 with a raw
FT                   score of 12.53."
FT   CDS             complement(1162997..1163356)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250287"
FT                   /product="putative SelR domain containing protein"
FT                   /note="C1336_000250287 identified by Glimmer3 with a raw
FT                   score of 12.53. Gene function extrapolated from Cj1112c
FT                   (AL111168.1) after blastn alignment (98.06 percent identity
FT                   over a 360 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31019.1"
FT                   /translation="MKELNEEEKKVILNKGTEAPFSGKYNDFYEKGIYQCKQCGASLYK
FT                   SEDKFKSGCGWPSFDDEIRGAIKRIPDKDGIRTEIVCANCNGHLGHVFEGEGFSAKNVR
FT                   HCVNSISLEFVKTKD"
FT   gene            1163446..1164243
FT                   /locus_tag="C1336_000250288"
FT                   /note="C1336_000250288 identified by Glimmer3 with a raw
FT                   score of 7.79."
FT   CDS             1163446..1164243
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250288"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250288 identified by Glimmer3 with a raw
FT                   score of 7.79. Gene function extrapolated from C8J_1054
FT                   (CP000814.1) after blastn alignment (98.87 percent identity
FT                   over a 798 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31020.1"
FT                   /translation="MQKEFFQELQDILYEKNITIKFHSFQNFYEDFKSHKFNFNHEHQS
FT                   IFKKNTSQQITLLHPTRIRRPKFVNSTHALAKIIHSVAHIEFNAINLALDASYRFKNLP
FT                   LQFYYDWLEVADEEIKHFKLLNSVLEELGYKYGNFPVHDNLESALEATKDSLSFRMGIV
FT                   HRGLEAKGLDANPFVVQKLQSSNHSIKNLLMEYLEIILNDEIKHVKKGDTWWKFANQNK
FT                   YDFIELCKTFKQFSLAGKKLNIQARIKAGFTQEECEVIEKFYS"
FT   gene            complement(1164234..1164962)
FT                   /locus_tag="C1336_000250289"
FT                   /note="C1336_000250289 identified by Glimmer3 with a raw
FT                   score of 11.35."
FT   CDS             complement(1164234..1164962)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250289"
FT                   /product="CDP-diacylglycerol--serine
FT                   O-phosphatidyltransferase"
FT                   /note="C1336_000250289 identified by Glimmer3 with a raw
FT                   score of 11.35. Gene function extrapolated from C8J_1055
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 108 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31021.1"
FT                   /translation="MNNRPQLIYILPNLFTAASAFLGVISIIASIHGNYYTALIYIILS
FT                   LICDGLDGRVARLTNSTSKFGVEFDSLADLVAFGVAPAVLFYMAIGYDFGKLGSLITAF
FT                   FVVFGAIRLARFNVTTGTYEPSVFIGLPIPTAAVVSAIWTYAFISYDFLKPYGVVFLVL
FT                   QAILGLLMVSNIRYPSFKKLDFNRSSVLKVLIILIIIFSFLYLYPLESLVILASLYVLY
FT                   GIIRVLYTIIVSKFKIRNQE"
FT   gene            complement(1164972..1165589)
FT                   /locus_tag="C1336_000250290"
FT                   /note="C1336_000250290 identified by Glimmer3 with a raw
FT                   score of 9.96."
FT   CDS             complement(1164972..1165589)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250290"
FT                   /product="phosphatidylserine decarboxylase-related protein"
FT                   /note="C1336_000250290 identified by Glimmer3 with a raw
FT                   score of 9.96. Gene function extrapolated from
FT                   CJJ81176_1133 (CP000538.1) after blastn alignment (98.13
FT                   percent identity over a 482 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31022.1"
FT                   /translation="MKDFIAKDGYLSLIILSLIFIFVWIFYSFSILLLALIVICIFLFR
FT                   APKRELVCSDEKAIFAPIDGRVTKIENIHHKDLGECVEITIKNALYDAGNFNTPFAMSI
FT                   IDIRLRHGLFLCSELKSAKMMNERAFILAKVKENKTIALRIYAGSFDRKLKLDNISHDL
FT                   KAGDKMGFLINGSISLLLPKDTRIHIGLNDEIKAGSLLGYFA"
FT   gene            complement(1165586..1167523)
FT                   /locus_tag="C1336_000250291"
FT                   /note="C1336_000250291 identified by Glimmer3 with a raw
FT                   score of 11.00."
FT   CDS             complement(1165586..1167523)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250291"
FT                   /product="cell division protein FtsH"
FT                   /note="C1336_000250291 identified by Glimmer3 with a raw
FT                   score of 11.00. Gene function extrapolated from CJE1259
FT                   (CP000025.1) after blastn alignment (98.08 percent identity
FT                   over a 261 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31023.1"
FT                   /translation="MNNNTPNNKGNPQGNNFFNKNPIFIFAIFAIVMIIIFKGFFDGNG
FT                   SFGGALNGNEVNKNVPYSELKKLIENGQINQVSIGQTTIKAISSSHNTVYTAKKVNDPE
FT                   LVSLLDSKNIAYGAYSETNWFTDILFSWVLPVFIFFGIWMFLASRMQKNMGSSILGIGS
FT                   SKKLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGT
FT                   GKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDA
FT                   IGKSRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGR
FT                   FDRQVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALL
FT                   AGRDSKKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIAETTKGAKR
FT                   VSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVFIGEISTGAS
FT                   NDLERATDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDYSEKMAESLDDYVKK
FT                   TLDERYKDVKDTLNTYKGAIETMVAALYEEETIEGAKVREIIKEFEEQNSLPTRLQELE
FT                   EVKIEVKVEE"
FT   gene            complement(1167523..1168371)
FT                   /locus_tag="C1336_000250292"
FT                   /note="C1336_000250292 identified by Glimmer3 with a raw
FT                   score of 9.75."
FT   CDS             complement(1167523..1168371)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250292"
FT                   /product="putative ribosomal protein L11 methyltransferase"
FT                   /note="C1336_000250292 identified by Glimmer3 with a raw
FT                   score of 9.75. Gene function extrapolated from
FT                   JJD26997_0604 (CP000768.1) after blastn alignment (97.61
FT                   percent identity over a 837 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31024.1"
FT                   /translation="MQKKYYELFFIVEEQYKNLFLDFAFDLGIEAIEEKDNGVYIRSHE
FT                   SLEELSWALEIFAQKLTTTFNLNHKIISNLSLVEKENKDWIQEYKNGIKPILVDNVYIH
FT                   TTWQEEKKNYINIKINPALAFGSGHHESTYSCVKFLQKFSKSKLRALDLGCGSGILGII
FT                   MAKFGCNVEICDTDELAIDSSLENARLNDVDFHKTWCGSIDKANGLYNLIVANIIADVI
FT                   LILEKDIKNHLEDNAILILSGILDKYSTRIKEKFQDLELIDEMQINEWCSFVYKNNKKD
FT                   K"
FT   gene            complement(1168394..1168780)
FT                   /locus_tag="C1336_000250293"
FT                   /note="C1336_000250293 identified by Glimmer3 with a raw
FT                   score of 15.65."
FT   CDS             complement(1168394..1168780)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250293"
FT                   /product="chemotaxis regulatory protein"
FT                   /note="C1336_000250293 identified by Glimmer3 with a raw
FT                   score of 15.65. Gene function extrapolated from C8J_1059
FT                   (CP000814.1) after blastn alignment (98.97 percent identity
FT                   over a 387 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31025.1"
FT                   /translation="MLVVDDSSTMRRIIKNTLTRLGHDDVLEAEHGVEAWDLLTKNEDV
FT                   KVLITDWNMPEMNGLELVKKVRAEKKYEDMPIIMVTTEGGKAEVITALKAGVNNYIVKP
FT                   FTPQVLKEKLEDVLGIGSGEGAAE"
FT   gene            complement(1168899..1169792)
FT                   /locus_tag="C1336_000250294"
FT                   /note="C1336_000250294 identified by Glimmer3 with a raw
FT                   score of 13.00."
FT   CDS             complement(1168899..1169792)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250294"
FT                   /product="general glycosylation pathway protein"
FT                   /note="C1336_000250294 identified by Glimmer3 with a raw
FT                   score of 13.00. Gene function extrapolated from
FT                   JJD26997_0602 (CP000768.1) after blastn alignment (99.16
FT                   percent identity over a 119 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31026.1"
FT                   /translation="MYIKDIQRFEDNRYRARAYMSYILTRNLPNKLPDIHLETIKTALD
FT                   KIAHEVVVFDALYILDISGMQIENAISLNKAHEIGQGEDRSTRSYFYRAVKLRRCVLSD
FT                   PYPSVLNNELCVTASMPIYDDKNNLLFVVCIDIKLEDILRIIQAGKFEFVFTQFSRLVY
FT                   FCFALVLFVITCFLFQKGFFSLFDNQAIGIEHMFESTIAITLALAIFDLAKTLIEQEVL
FT                   GKTKKEEGGIQKTMVRFLGSIIIALAIEALMLVFKLAIGDFSQMIYAIYLIGGVSLLLL
FT                   GLSVYLFTVKYKNNNI"
FT   gene            complement(1169792..1171564)
FT                   /locus_tag="C1336_000250295"
FT                   /note="C1336_000250295 identified by Glimmer3 with a raw
FT                   score of 15.03."
FT   CDS             complement(1169792..1171564)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250295"
FT                   /product="UDP-GlcNAc C4,6 dehydratase"
FT                   /note="C1336_000250295 identified by Glimmer3 with a raw
FT                   score of 15.03. Gene function extrapolated from Cj1120c
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 113 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31027.1"
FT                   /translation="MIFYKSKRLAFFLTSDIVLILLSVYLAFSLRFSGDIPSIFYHGMM
FT                   ISAIILLVLKLLFLFVFRIYKVAWRFFSLNEARKIFIALLLAEFCFFLIFYFFSDFFNP
FT                   FPRSAIVIDFLLSYMFIGTLRISKRMLVDFKPSKMKEEETPCIVVGATSKALHLLKGAK
FT                   EGSLGLFPVGVVDARKELIGTYCDKFIVEEKEKIKSYVEQGVKTAIIALRLEQEELKKL
FT                   FEELVAYGICDVKIFSFTRNEARDISIEDLLARKPKDLDDSAVAAFLKDKVVLVSGAGG
FT                   TIGSELCKQCIKFGAKHLIMVDHSEYNLYKINDDLNLYKEKITPILLSILDKQSLDEVL
FT                   KTYKPELILHAAAYKHVPLCEQNPHSAVINNILGTKILCDSAKENKVAKFVMISTDKAV
FT                   RPTNIMGCTKRVCELYTLSMSDENFEVACVRFGNVLGSSGSVIPKFKAQIANNEPLTLT
FT                   HPDIVRYFMLVAEAVQLVLQAGAIAKGGELFVLDMGKPVKIIDLAKKMLLLSNRNDLEI
FT                   KITGLRKGEKLYEELLIDENDAKTQYESIFVAKNEKVDLDWLNKEIENLQICEDISEAL
FT                   LKIVPEFKHNKEGV"
FT   gene            complement(1171566..1172726)
FT                   /locus_tag="C1336_000250296"
FT                   /note="C1336_000250296 identified by Glimmer3 with a raw
FT                   score of 16.01."
FT   CDS             complement(1171566..1172726)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250296"
FT                   /product="general glycosylation pathway protein"
FT                   /note="C1336_000250296 identified by Glimmer3 with a raw
FT                   score of 16.01. Gene function extrapolated from
FT                   CJJ81176_1139 (CP000538.1) after blastn alignment (97.24
FT                   percent identity over a 1161 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31028.1"
FT                   /translation="MRFFLSPPHMGGNELKYIEEVFKSNYIAPLGEFVNRFEQSVKDYS
FT                   KSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYLKAKPVFIDCDET
FT                   YNIDVDLLKLAIKECEKKPKALILTHLYGNAAKMDEIVKICKENDIVLIEDAAEALGSF
FT                   YKNKALGTFGEFGAYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHL
FT                   DYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEHFSFLDELENSRSNRW
FT                   LSTALIDFDKNELNACQKDINISQKNIALHPKISKLIEDLKNEQIETRPLWKAMHTQEV
FT                   FKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA"
FT   gene            complement(1172824..1173435)
FT                   /locus_tag="C1336_000250297"
FT                   /note="C1336_000250297 identified by Glimmer3 with a raw
FT                   score of 13.86."
FT   CDS             complement(1172824..1173435)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250297"
FT                   /product="acetyltransferase"
FT                   /note="C1336_000250297 identified by Glimmer3 with a raw
FT                   score of 13.86. Gene function extrapolated from Cj1123c
FT                   (AL111168.1) after blastn alignment (98.66 percent identity
FT                   over a 149 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31029.1"
FT                   /translation="MLQQRNLMARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFK
FT                   GVKFESTLPKYDFFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAGVEENAGI
FT                   LIMPYVVVNAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGIN
FT                   SCVLPNLSLADDSILGGGATLVKSQDEKGVFVGVPAKRKI"
FT   gene            complement(1173401..1174003)
FT                   /locus_tag="C1336_000250298"
FT                   /note="C1336_000250298 identified by Glimmer3 with a raw
FT                   score of 11.40."
FT   CDS             complement(1173401..1174003)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250298"
FT                   /product="galactosyltransferase"
FT                   /note="C1336_000250298 identified by Glimmer3 with a raw
FT                   score of 11.40. Gene function extrapolated from Cj1124c
FT                   (AL111168.1) after blastn alignment (98.33 percent identity
FT                   over a 299 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31030.1"
FT                   /translation="MYEKVFKRIFDFILALVLLVLFSPVILITALLLKITQGSVIFTQN
FT                   RPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLKAFGKIVRSLSLDELLQLFNVLKGD
FT                   MSFVGPRPLLVEYLPLYNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNI
FT                   SFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN"
FT   gene            complement(1173996..1175126)
FT                   /locus_tag="C1336_000250299"
FT                   /note="C1336_000250299 identified by Glimmer3 with a raw
FT                   score of 15.42."
FT   CDS             complement(1173996..1175126)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250299"
FT                   /product="general glycosylation pathway protein"
FT                   /note="C1336_000250299 identified by Glimmer3 with a raw
FT                   score of 15.42. Gene function extrapolated from CJE1267
FT                   (CP000025.1) after blastn alignment (99.07 percent identity
FT                   over a 108 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31031.1"
FT                   /translation="MRIGFLSHAGASIYHFRMPIIKALKDRKDEVFVIVPQDEYTQKLR
FT                   DLSLKVIVYEFSRASLNPFVVLKNFFYLAKVLKNLNLDFIQSAAHKSNTFGILAAKWAK
FT                   IPYRFALVEGLGSFYIDQGFKANLVRFVINNLYKLSFKFAHQFIFVNESNAEFMRNLGL
FT                   KENKICVIKSVGINVKKFFPIYVESEKKELFWKNLNIDKKPIVLMIARTLWHKGVKEFY
FT                   ESAAMLKDKANFVLVGGRDENPSCASLEFLNSGVVHYLGARSDIVELLQNCDIFVLPSY
FT                   KEGFPVSVLEAKACGKAIVVSDCEGCVEAISNAYDGLWAKTKNAKDLSEKISLLLEDEK
FT                   LRLNLAKNAAQDALQYDENNIAQRYLKLYDRVIKNV"
FT   gene            complement(1175136..1177277)
FT                   /locus_tag="C1336_000250300"
FT                   /note="C1336_000250300 identified by Glimmer3 with a raw
FT                   score of 10.99."
FT   CDS             complement(1175136..1177277)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250300"
FT                   /product="putative integral membrane protein (possible
FT                   oligosaccharyl transferase)"
FT                   /note="C1336_000250300 identified by Glimmer3 with a raw
FT                   score of 10.99. Gene function extrapolated from C8J_1066
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 84 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31032.1"
FT                   /translation="MLKKEYLKNPYLVLFAMIILAYVFSVFCRFYWVWWASEFNEYFFN
FT                   NQLMIISNDGYAFAEGARDMIAGFHQPNDLSYYGSSLSALTYWLYKVTPFSFESIILYM
FT                   STFLSSLVVIPIILLANEYKRPLMGFVAALLASIANSYYNRTMSGYYDTDMLVIVLPMF
FT                   ILFFMVRMILKKDFFSLIALPLFIGIYLWWYPSSYTLNVALIGLFLIYTLIFHRKEKIF
FT                   YIAVILSSLTLSNIAWFYQSAIIVILFALFALEQKRLNFMIIGILGSATLIFLILSGGV
FT                   DPILYQLKFYIFRSDESANLTQGFMYFNVNQTIQEVENVDLSEFMRRISGSEIVFLFSL
FT                   FGFVWLLRKHKSMIMALPILVLGFLALKGGLRFTIYSVPVMALGFGFLLSEFKAILVKK
FT                   YSQLTSNVCIVFATILTLAPVFIHIYNYKAPTVFSQNEASLLNQLKNIANREDYVVTWW
FT                   DYGYPVRYYSDVKTLVDGGKHLGKDNFFPSFALSKDEQAAANMARLSVEYTEKSFYAPQ
FT                   NDILKTDILQAMMKDYNQSNVDLFLASLSKPDFKIDTPKTRDIYLYMPARMSLIFSTVA
FT                   SFSFINLDTGVLDKPFTFSTAYPLDVKNGEIYLSNGVVLSDDFRSFKIGDNVVSVNSIV
FT                   EINSIKQGEYKITPIDDKAQFYIFYLKDSAIPYAQFILMDKTMFNSAYVQMFFLGNYDK
FT                   NLFDLVINSRDAKVFKLKI"
FT   gene            complement(1177281..1178378)
FT                   /locus_tag="C1336_000250301"
FT                   /note="C1336_000250301 identified by Glimmer3 with a raw
FT                   score of 15.33."
FT   CDS             complement(1177281..1178378)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250301"
FT                   /product="GalNAc transferase"
FT                   /note="C1336_000250301 identified by Glimmer3 with a raw
FT                   score of 15.33. Gene function extrapolated from Cj1127c
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 181 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31033.1"
FT                   /translation="MQKLGIFIYSLGSGGAERVVATLLPILSLKFEVHLILMNDKISYE
FT                   IPECQIHFLECSKPSENPILKFLKLPFLALKYKKLCRNLGIDTEFVFLNRPNYIALMAR
FT                   MFGNKTRLVINECTTPSVMYMKNNFNSLANKFLISLLYPRADLILPNSKGNLEDLVQNF
FT                   SINPKKCEILYNAIDLENIEQKALEDIALKDKFILSVGRLDKGKNHALLIRAYARLKTD
FT                   LKLVILGEGVLKDELLALIKELNLEEKVLLLGFDNNPYKYMAKCEFFAFASVFEGFSNV
FT                   LIESLACSCAVVCTDHKSGARELFGDDEFGLLVEVDNENSMFQGLKTMLEDDKLRKAYK
FT                   NKAKTRAKAFDKVKIARDALKYLLG"
FT   gene            complement(1178366..1179295)
FT                   /locus_tag="C1336_000250302"
FT                   /note="C1336_000250302 identified by Glimmer3 with a raw
FT                   score of 14.83."
FT   CDS             complement(1178366..1179295)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250302"
FT                   /product="general glycosylation pathway protein"
FT                   /note="C1336_000250302 identified by Glimmer3 with a raw
FT                   score of 14.83. Gene function extrapolated from C8J_1068
FT                   (CP000814.1) after blastn alignment (98.49 percent identity
FT                   over a 930 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31034.1"
FT                   /translation="MPKLSVVVPTFNRQVLLEKAIKSIQNQDFKDLEIIISDDNSSDDT
FT                   KSVVQNLQKDDDRIKYFLNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGTLSTL
FT                   MQKANEGYAHVFGNCLIEKEGNLSKEFSGKGLEKDSEISKKDFLMAKFSGEFFSVFKKS
FT                   LLENKRFNEEFYGNEATLWVNLYKEKSFYIHKAFRIYRIYRQDSVTLGASKNAYRVYLG
FT                   YLELAKILENELRMSKDEDYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSIKINAP
FT                   ALILLILSIIPNNMIEKLSKIRVALCKN"
FT   gene            complement(1179288..1180364)
FT                   /locus_tag="C1336_000250303"
FT                   /note="C1336_000250303 identified by Glimmer3 with a raw
FT                   score of 15.49."
FT   CDS             complement(1179288..1180364)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250303"
FT                   /product="putative glycosyltransferase"
FT                   /note="C1336_000250303 identified by Glimmer3 with a raw
FT                   score of 15.49. Gene function extrapolated from C8J_1069
FT                   (CP000814.1) after blastn alignment (99.25 percent identity
FT                   over a 799 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31035.1"
FT                   /translation="MKISFIIATLNSGGAERVLVTLANALCKEHEVNIIKFHAGESFYK
FT                   LENEVKVTSLEQFRFDTLYHKIASRFKKFFALRKALKESKADVFISFLDTTNIACILAN
FT                   IGLKTPLIISEHSNEAYLKPKTWRFLRRVSYPFCDALSVLGSSDKVYYERFVKKVKLLL
FT                   NPCHFSDEIPFDSSFEKENLVLFIGRLDHNKNPAMFLKAIAHLDKNLQENYKFVIAGDG
FT                   ELRQELEYKVKSLGIKVDFLGRVENVKALYEKAKVLCLCSFVEGLPTVLIESLYFEVCR
FT                   ISSSYYNGAKDLIKDNHDGLLVGCDDEIALAKKLELVLNDENFRKELVNNAKQRCKDFE
FT                   ISHIKEEWLKLIAEVKNA"
FT   gene            complement(1180364..1182058)
FT                   /locus_tag="C1336_000250304"
FT                   /note="C1336_000250304 identified by Glimmer3 with a raw
FT                   score of 14.29."
FT   CDS             complement(1180364..1182058)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250304"
FT                   /product="flippase"
FT                   /note="C1336_000250304 identified by Glimmer3 with a raw
FT                   score of 14.29. Gene function extrapolated from Cj1130c
FT                   (AL111168.1) after blastn alignment (99.40 percent identity
FT                   over a 336 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31036.1"
FT                   /translation="MLKKLFFILSKEDKNFLFFLLVFSVFVSFMETFAISLVMPFITLA
FT                   SDFSYFDRNKYLISLKEYLNIPVFEIIVYFGVGLIVFYVFRALLNAYYFHLLARFSKGR
FT                   YHAIAYKVFSKFLNINYEKFTQKNQSEILKSITGEVYNLSTMISSFLLLMSEIFVVLLL
FT                   YALMLLINYKITLFLSIFMVLNAFILVKILSPIIKKAGLKREEAMKNFFEILNTNLNNF
FT                   KFIKLKTKEDGVLSLFKAQSEAFSKANITNESVAAVPRIYLEGIGFCVLVFIVVFLVLK
FT                   NESDISGILSTISIFVLALYRLMPSANRIITSYHDLLYYHSSLDIIYQNLRQEEENLGE
FT                   EKLSFNQELKICNLSFGYEGKKYLFKNLNLNIKKGEKIAFIGESGCGKSTLVDLIIGLL
FT                   KPKEGQILIDKQELNASNAKNYRQKIGYIPQNIYLFNDSIAKNITFGDAVDEEKLNRVI
FT                   KQANLEHFIKNLPQGVQTKVGDGGSNLSGGQKQRIAIARALYLEPEILVLDEATSALDT
FT                   QSEAKIMDEIYKISKDKTMIIIAHRLSTITQCDKVYRLEHGKLKEEK"
FT   gene            complement(1182052..1183038)
FT                   /locus_tag="C1336_000250305"
FT                   /note="C1336_000250305 identified by Glimmer3 with a raw
FT                   score of 14.82."
FT   CDS             complement(1182052..1183038)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250305"
FT                   /product="UDP-GlcNAc/Glc 4-epimerase"
FT                   /note="C1336_000250305 identified by Glimmer3 with a raw
FT                   score of 14.82. Gene function extrapolated from Cj1131c
FT                   (AL111168.1) after blastn alignment (97.77 percent identity
FT                   over a 987 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31037.1"
FT                   /translation="MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQ
FT                   KIRAFKFFEQDLSDFQGAKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTN
FT                   LIETCLQTGVNKFIFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMA
FT                   NPEFKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKREKLFIFGDDYDTKD
FT                   GTCIRDFIHVDDISSAHLAALDYLQENESNVFNVGYGHGFSVKEVIGAMKKVSGVDFKV
FT                   ELAPRRAGDPSVLISDASKIRNLTSWQPKYDDLELICKSAFDWEKQC"
FT   gene            complement(1183097..1183846)
FT                   /locus_tag="C1336_000250306"
FT                   /note="C1336_000250306 identified by Glimmer3 with a raw
FT                   score of 13.90."
FT   CDS             complement(1183097..1183846)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250306"
FT                   /product="polysaccharide biosynthesis protein"
FT                   /note="C1336_000250306 identified by Glimmer3 with a raw
FT                   score of 13.90. Gene function extrapolated from CJE1274
FT                   (CP000025.1) after blastn alignment (97.60 percent identity
FT                   over a 750 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31038.1"
FT                   /translation="MPDVELIRKTLGFEGSDLEISLKALQWQKEQSGSEFLPLPYHKII
FT                   SICAVLSDNFGKFIKVNKIDGQNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRA
FT                   LKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNGRGIKLDTLCSMVGLPGKY
FT                   DVHGDEVMKLFYENELEKIHEYCESDVLNTYMLFLKYELIKANVSEEDYVDFLSYMRDF
FT                   LRAKKSDRSYAEVFAKACENEISKVQS"
FT   gene            1183959..1184987
FT                   /locus_tag="C1336_000250307"
FT                   /note="C1336_000250307 identified by Glimmer3 with a raw
FT                   score of 11.40."
FT   CDS             1183959..1184987
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250307"
FT                   /product="lipopolysaccharide heptosyltransferase I"
FT                   /note="C1336_000250307 identified by Glimmer3 with a raw
FT                   score of 11.40. Gene function extrapolated from CJE1275
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 175 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31039.1"
FT                   /translation="MKIAIVRLSALGDIIQSAVVLQFIKNFKKDIEIHWFVDEKFEGIL
FT                   KNHPLIDKLYALPLKDKKILKSLKILLKAKKNNYNAVIDLQGLIKSAIVSRILSRNNFG
FT                   FDKNSLKESFAHNFYNQKLELDYNENVFVRYLSLTSFMLNTDFNVKNLAFKQDIFSVDE
FT                   NLKQLLNNKLKLDKNEKNILIHVGSSVENKIYPKTKLAILCKLLINEFQQAKIWLAWGN
FT                   VKEYEFAKEVLNLSGIDETHIELVPKFNLEELMAFTKMMDLIIGNDSGPTHLAFALNKA
FT                   SITIFGATPSYRNAFQTHINKIIDAGKKIQNAKHIDKSDFCITRIEEEDIFKLAKGLLN
FT                   EK"
FT   gene            1184977..1185819
FT                   /locus_tag="C1336_000250308"
FT                   /note="C1336_000250308 identified by Glimmer3 with a raw
FT                   score of 10.93."
FT   CDS             1184977..1185819
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250308"
FT                   /product="lipid A biosynthesis lauroyl acyltransferase"
FT                   /note="C1336_000250308 identified by Glimmer3 with a raw
FT                   score of 10.93. Gene function extrapolated from C8J_1074
FT                   (CP000814.1) after blastn alignment (98.09 percent identity
FT                   over a 157 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31040.1"
FT                   /translation="MKNSDRIYLSLYYILKFFVTFMPECILHFLALIVARITFYLNKKH
FT                   RKIIDINLQICFPQYTQKERDKLSLKIYENFAQFGIDCLQNQNTTKEKILNKVNFINEN
FT                   FLIDALALKRPIIFTTAHYGNWEILSLAYAAKYGAISIVGKKLKSEVMYEILSKNRTQF
FT                   NIELIDKKGGIRQMLSALKKGRTLGILTDQDCAENESVRLKFFNKEVNYQMGASLIAQR
FT                   SNALIIPVYGYKEGGKFCIEFFRAKDSQNASLKELTLYQAQSCEEMIQKRPWEYFFFS"
FT   gene            1185863..1187416
FT                   /locus_tag="C1336_000250309"
FT                   /note="C1336_000250309 identified by Glimmer3 with a raw
FT                   score of 12.35."
FT   CDS             1185863..1187416
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250309"
FT                   /product="putative two-domain glucosyltransferase"
FT                   /note="C1336_000250309 identified by Glimmer3 with a raw
FT                   score of 12.35. Gene function extrapolated from Cj1135
FT                   (AL111168.1) after blastn alignment (98.51 percent identity
FT                   over a 268 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31041.1"
FT                   /translation="MNLKQISVIIIVKNAEQTLLECLNSLKDFDEIILLNNESSDNTLN
FT                   IANEFKKDFANLHIYHSAFIGFGALKNLALSYAKNDWILSIDADEVLENECINELKNLE
FT                   LQEDNIIALSRKNLYKGEWIKACGWSPDYVLRIFNKNFTRFNDNLVHESLILPNNAKKI
FT                   HLKNGLRHYAFRDISHLINKMQYYSSLWAKQNMHKKSGVLKANLRAFWTFFRNYFLKNG
FT                   FLYGYKGFIISVCNALGTFFKYMKLYELQKQKPKTCALIITTYNQKERLKLVLDSVKNL
FT                   AFLPNEVLIADDGSKEDTARLIEEYQKDFPCPLKHIWQEDEGFRLSKSRNKAIKNTDSE
FT                   YIIVIDGDMILEQDFIKEHLEFAQRKLFLQGSRVILNKKESEEILNKDDYRIIFNKKDF
FT                   KSSKNSFLAKMLYSLSKKDEKIFKKTKLIKGIRGCNMSFFKADFDELDGFNENFIGWGR
FT                   EDSEFVARFLFNKGIFRRLKFKAIAYHIYHEENSKKMLESNHKIYLDTIKNKNISWKNT
FT                   "
FT   gene            1187413..1188465
FT                   /locus_tag="C1336_000250310"
FT                   /note="C1336_000250310 identified by Glimmer3 with a raw
FT                   score of 7.76."
FT   CDS             1187413..1188465
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250310"
FT                   /product="putative glycosyltransferase"
FT                   /note="C1336_000250310 identified by Glimmer3 with a raw
FT                   score of 7.76. Gene function extrapolated from
FT                   JJD26997_0584 (CP000768.1) after blastn alignment (83.19
FT                   percent identity over a 345 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31042.1"
FT                   /translation="MKIVLLIGDITIGGGAERVVCNLANAFNELGYNVEILSFYKNEEN
FT                   LAYEVHKNIQISFFHIVSRNKVFKKPFYKLYYKYYESYILKQKYKDADIMIYNNCSQFP
FT                   FFKNKNTKYIKLIHEIFKRYQLRNNFFDNLIILSLRELSIWKQYHNNVSYIPNFTPIIT
FT                   NKNSHLNQKRILSIGRITKEDQKGFLRLVDIWEIVQKNQNFKEWKLHIIGDGALKEELF
FT                   YKIKTKKLEHSIVLSPFNKNIEEEYLKASIYVMTSYFESFGMVLIESANYSIPSISFDV
FT                   KTGPKEIIDNKRSGFLIEDGNLQEFANKLQVLMQDERLREKFGKNAKEKVQKEFSKEAI
FT                   MQKWIKLINS"
FT   gene            complement(1188462..1189661)
FT                   /locus_tag="C1336_000250311"
FT                   /note="C1336_000250311 identified by Glimmer3 with a raw
FT                   score of 9.92."
FT   CDS             complement(1188462..1189661)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250311"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250311 identified by Glimmer3 with a raw
FT                   score of 9.92. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31043.1"
FT                   /translation="MYNIIFSADENYIKYTAVLITSIIKNTDTNNGFLNNIYHFHILSD
FT                   FLNDSVKEKLDKLQNELSEIYPCKISIYIMKDDKFENFPSSGAAHSLKLPYYRLKFISL
FT                   LDDSVDKCLYLDSDMLCMCDIRELFYLDLKDSIVAVVGDPGSKKSKIKFIEDGKKRVLK
FT                   FDENYFNSGFLFINVKEYKKAHIEQKCEELAKKCIYIKAADQDLLNACIPKDKILKLDF
FT                   AYNFNIITLLYTVCKDEKKNRLNYTREEFVQSMKNPKILHYGEKPWKFLHSYKDFYGKN
FT                   INDYWWDIVQITPIFKEELLKQKKEIKDYLLYVGLGYTLYNFCKKYQIFDIKKLLKTEN
FT                   DKELVEFAKDLNDEKYGLYCMLGEMVLYARKHKKGMINIILKSYKMIKMYEKYTHKSKL
FT                   "
FT   gene            complement(1189711..1190796)
FT                   /locus_tag="C1336_000250312"
FT                   /note="C1336_000250312 identified by Glimmer3 with a raw
FT                   score of 5.25."
FT   CDS             complement(1189711..1190796)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250312"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250312 identified by Glimmer3 with a raw
FT                   score of 5.25. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31044.1"
FT                   /translation="MLIDKRDCLTVEEQLLIIRDVEKRFLKFWEKDFDRSSFLTCRDNF
FT                   ALTKDIQSTQLIKQEIMKKPKFTIAIPVFQRVEKLKRALKSALSQNYNEEYEILIVENP
FT                   SEINDNSIYEMLKKEFDKKVNFYKNESNISVFNNWNRCLHLAQGDWVCLLHSDDEITND
FT                   YLSEMDYFLSKYSNGILIGCVDRIKDIYPPNMYSKSKYRILYFFEKLFYSRQMLEKKSV
FT                   RNKKWSKYAKYGETIFLPPNAILHNREKCIKFGGYNQDENPNADQVFVNRMKQFGNVFL
FT                   YRKKILQKKHASDSYGLTPSCIMQLSFLDPQVFYALISSKKRSQKSAYKQIMHYKNFLK
FT                   EKKCYVLVKYLDDFFKKYDLN"
FT   gene            complement(1190800..1192122)
FT                   /locus_tag="C1336_000250313"
FT                   /note="C1336_000250313 identified by Glimmer3 with a raw
FT                   score of 9.05."
FT   CDS             complement(1190800..1192122)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250313"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250313 identified by Glimmer3 with a raw
FT                   score of 9.05. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31045.1"
FT                   /translation="MLIQELKKEILNKVKEYYNLYHKPKFNEIISKKSKINYAGRIFDE
FT                   KELEYLVDSSLEFWLTYSKYSEKFEKDLAKFLGIKWAFLVNSGSSANLLAFFALTSPLL
FT                   KERQIQRGDEIITVAAGFPTTIAPIIQYGAVPVFVDMNLKYANIDIDQLELALSSKTKA
FT                   VIIAHTLGNPFNVKAVKEFCNKYNLWLIEDNCDALGSKYDGKMTGTWGDIGTSSFYPPH
FT                   HITMGEGGAVYTDNLLLKKIILSMRDWGRDCWCKSGMDNTCGCRFAQNFGTLPKGYDHK
FT                   YVYSHFGFNLKVTDMQAAIGCAQLEKLPDFIEKRKYNYQRLYEGLKDIEQLKLVEKQPN
FT                   SEPSWFGFMMTVKENSDFSRNEITNFLEQYNIQTRTLFAGNIIRHPAFNALKINKDYKV
FT                   IGSLKVTDKIMNDSFWVGVYPGMNDDMIDYIILKIREFVKR"
FT   gene            complement(1192122..1193042)
FT                   /locus_tag="C1336_000250314"
FT                   /note="C1336_000250314 identified by Glimmer3 with a raw
FT                   score of 6.94."
FT   CDS             complement(1192122..1193042)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250314"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250314 identified by Glimmer3 with a raw
FT                   score of 6.94. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31046.1"
FT                   /translation="MNIFITGSNGFIGKHLKEYLQQKYSYYTLHCPNSKELDLIDESAV
FT                   DNFIKNHKIDIIIHLANKGEYKIGFQNTVEYNLRIFLNLLKHVNKVYKFLSFGSGAEYG
FT                   KHHNIINVKEEECRGYALDSYGFYKQIVSKLIKNYKNVIHLRLFGVYGEYEDYRFKFIS
FT                   NTICKNFLKLPIVINQNCFFDYIYIVDLIKIIDYALHHDMCHQIYNATSGEGYRVDLLT
FT                   IANIVNDLSDFKSDVIILNKGLNSEYTANNDRILSEMNGFKFTSHKKAISNMKAYYWRN
FT                   LDKIDSKAVVDDLYLKMIQKLKENE"
FT   gene            complement(1193042..1194798)
FT                   /locus_tag="C1336_000250334"
FT                   /note="Features C1336_000250315, C1336_000250316 joined to
FT                   form C1336_000250334 to correct 454 sequencing error
FT                   (C1336_000250315 identified by Glimmer3 with a raw score of
FT                   7.53, C1336_000250316 identified by Glimmer3 with a raw
FT                   score of 11.21)."
FT   CDS             complement(join(1193042..1194085,1194085..1194798))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250334"
FT                   /product="hypothetical protein"
FT                   /note="Features C1336_000250315, C1336_000250316 joined to
FT                   form C1336_000250334 to correct 454 sequencing error
FT                   (C1336_000250315 identified by Glimmer3 with a raw score of
FT                   7.53, C1336_000250316 identified by Glimmer3 with a raw
FT                   score of 11.21). A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31047.1"
FT                   /translation="MKASDFLVNFLVLNKVDKVFGYIGGAVAHIYDSISKNSNIEMING
FT                   IQEQGSAFAAEGYARITGKSGVVIATSGPGATNLITTIGSCYFDSVPLLCITGQVNTYE
FT                   FNYSKSSRQIGFQETDIVEIVKPITKYAVMVNKIEDLRYELEKAHFISHFQRKGPVLID
FT                   IPMNIQRAEIDFNQARSFFKSKEHLNMQETCIANNDLLVSQIKNTISKLSMAKSPIVLV
FT                   GGGVRNSNACRILDFFLKKYNLPVVHSLMGKDVVESEFELNLGLIGSYGNRCANLALAN
FT                   SDVILVLGSRLDTRQTGTDLKLFAKKSEIIQVDIDKNELGKKIPVKIQISSDIKLFLSR
FT                   IIKYNFQCKCDQWRNWVKNIIKILPSNKDIYGNIKIENFLISKISKKANAMIFCIDVGQ
FT                   HQMWAAQALNVLKNTRILFSGGMGAMGFSLPCAIGACIANKQSVVVIAGDGGFQMNIQE
FT                   LEVIKRRNLPIKIFIFNNQNLGMVRQFQEIYFDKNYIGTIKDYSVPNFKLIAKAYGIRS
FT                   RTIKSLNSFDRIINTVFSNSQPEVIDIVLNNKLTVVEPKLIIGKSIENMYPFMKPAKLK
FT                   ELMFCKKDK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1194798..1195889)
FT                   /locus_tag="C1336_000250317"
FT                   /note="C1336_000250317 identified by Glimmer3 with a raw
FT                   score of 9.45."
FT   CDS             complement(1194798..1195889)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250317"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250317 identified by Glimmer3 with a raw
FT                   score of 9.45. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31048.1"
FT                   /translation="MSFKIYENTKVFLTGHTGFKGSWLGLWLYNLGAKVDGYSLKPNTK
FT                   INHFDLLGGERLYENSYFSDINDKVELEKALINSDPEIIFHLAAQPLVRKSYQDPYNTF
FT                   QTNTIGTLNILNISRKLKNLKAIVLITTDKVYKNKEWLWGYRENDTLGGYDPYSASKAC
FT                   AELVIDSMRQSFFNVDDFGSKHQILIASARAGNVIGGGDWSEDRLIPDIIKACVSDKKV
FT                   EIRSPNSTRPWQHVLEPLYGYLLLGRKLFQGDTEFATSFNFGPEVSGNLTVNEVLKIAK
FT                   NFWDKISYQCKVDLNAPHEANLLMLDPSKAKKMLSWNSFFTSEESIKMTIEWYRSFYNE
FT                   GNIISTAQLNNLTNRYNLESFFN"
FT   gene            complement(1195902..1196702)
FT                   /locus_tag="C1336_000250318"
FT                   /note="C1336_000250318 identified by Glimmer3 with a raw
FT                   score of 9.92."
FT   CDS             complement(1195902..1196702)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250318"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250318 identified by Glimmer3 with a raw
FT                   score of 9.92. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31049.1"
FT                   /translation="MKVLILAGGFGTRLSEETNLKPKPMVEIGGKPILWHIMKIYSYYG
FT                   FNDFIILTGYKGHVIKDYFMNYYTQYSDITVDMSNNSIQIHNTRHEPWKVTMLYTGQDS
FT                   MTGGRILHAKPYVGNETFMLTYGDGVSDVNIKELINFHRSHSGYITMTSVLPEGKFGAL
FT                   DIDNDTNCIKSFTEKPKGDASLNNAGWINGGFFVCEPKIFEYIKEGDETIFEQAPLRNL
FT                   AQDGKLYSYKHHGFWKCMDTLKDKSDLTQMWINNKAPWALWLDK"
FT   gene            complement(1196706..1197665)
FT                   /locus_tag="C1336_000250319"
FT                   /note="C1336_000250319 identified by Glimmer3 with a raw
FT                   score of 6.46."
FT   CDS             complement(1196706..1197665)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250319"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250319 identified by Glimmer3 with a raw
FT                   score of 6.46. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31050.1"
FT                   /translation="MLESNFVIIRVDGGIVSQLYFFAIGKLFEKKGYKVKYDITWFEEE
FT                   GLGFYNINKGYDKTYNINWDIPKIFPNISIEIASKSEIDQYKKFRVDSELVLEYQPPLY
FT                   VVGYNSKCDIVEICREIREFFNPLELLSDNKIKFLANEIKRNRSCGVHVRRGDLSQEHV
FT                   VYGKPTSVDYFFKCINIVRSMYSDAKFYFFSDDNKWVKDNIAPHIENLDYFICDINTPE
FT                   KGYLDLYFLSLCKIIIGSHGSMGLGAKLLSQEETLFITPKYNYMLFSMSNIMMINFEPK
FT                   NMEPFNPKIKKIKYKILIKIYYYIRQILLRKFLIKGSD"
FT   gene            complement(1197677..1198696)
FT                   /locus_tag="C1336_000250320"
FT                   /note="C1336_000250320 identified by Glimmer3 with a raw
FT                   score of 7.42."
FT   CDS             complement(1197677..1198696)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250320"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250320 identified by Glimmer3 with a raw
FT                   score of 7.42. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31051.1"
FT                   /translation="MRIKFIQNMIDKIRNKQGKIHHKIYGSIYLPWYEQNAIISNLKPK
FT                   IYNQSGLPMDLFFIRDKHFAHNPYGCAHSKVENKYFLWDRFNFSLDTHFYTGESILETM
FT                   GRPSKKIAWILEPRSICEKPYKILEKNKILSSEFQYIITHDEKLLNQYPHAKMIYTMGV
FT                   WCYTDINDPLQYTEDKFKIKNKNISMVVSGKQLTPLHIVRNTLADKVREIGGEMVDVFG
FT                   AYVNRSICFKSESLDKYRYQIVVENEISTYYFTEKILDCFISMCIPIYIGATKIGDFFN
FT                   LDGIIEISPNDIDRIEYVLKQCNEKDYEERLAAIKDNYYRALKYINRENHLYEQLFIG"
FT   gene            complement(1199053..1200216)
FT                   /locus_tag="C1336_000250321"
FT                   /note="C1336_000250321 identified by Glimmer3 with a raw
FT                   score of 10.51."
FT   CDS             complement(1199053..1200216)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250321"
FT                   /product="WbdK"
FT                   /note="C1336_000250321 identified by Glimmer3 with a raw
FT                   score of 10.51. Gene function extrapolated from
FT                   JJD26997_0710 (CP000768.1) after blastn alignment (80.47
FT                   percent identity over a 343 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31052.1"
FT                   /translation="MEKYTLASSTWDEKELQAIQDVIKSDMFTMGKKVAEFEKDFAKFV
FT                   GSRYAVMTSSGSTANLIATAALFYTTNPRLKRGDEVIVPAVSWSTTYYPLYQYGLKLKF
FT                   VDIDLETLNYDLDALSSAISDRTKMIMVVNLLGNPNDFNVINNLIKGKDIILLEDNCES
FT                   MGAEYKGKQAGTFGIMGTFSTFFSHHMATMEGGFVITDHEELYHILLCLRAHGWTRNLP
FT                   KENLVANKSDDWFSEAFRFVLPGYNVRPVEMSGAIGIEQLKKLPMFLKHRRENAKLFCE
FT                   YFKNHPEFIMQKEIGSSSWFGFSLVIRPNSKLQRKDIIKKLEENDIEYRPIATGDFTQN
FT                   EVIKYFDYEIHQDLKNAKYIHEKGLFIGNHQFDISEQIDLLKKALDV"
FT   gene            complement(1200221..1201162)
FT                   /locus_tag="C1336_000250322"
FT                   /note="C1336_000250322 identified by Glimmer3 with a raw
FT                   score of 8.00."
FT   CDS             complement(1200221..1201162)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250322"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250322 identified by Glimmer3 with a raw
FT                   score of 8.00. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31053.1"
FT                   /translation="MSKEIKTILLTGSGGMVGKNILNYYKAQQYNFLSPKREELDLLNQ
FT                   ASLDSYLKCNKVDLVIHAAGLVGGIKVNIENPVKFLMENSYIGLNLISSCLKNNVGKIL
FT                   NLASSCIYPKNAKNPLREDMILKGELEATNEGYALAKILSVKACEYISKTSQDFFYKTI
FT                   IPCNLYGKYDKFDLDNSHMVPAVIAKLHNAKMNNVDKVEIWGDGKAKREFMYAEDLADF
FT                   IFHAIENFDLLPQNMNIGTGVDYAIDEYYYMIAKVVDYRGIFVHNTLKPVGMERKLVDI
FT                   SQVANFSWKYKTGLEEGLEKTYKYYLDKICKV"
FT   gene            complement(1201155..1202297)
FT                   /locus_tag="C1336_000250323"
FT                   /note="C1336_000250323 identified by Glimmer3 with a raw
FT                   score of 12.00."
FT   CDS             complement(1201155..1202297)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250323"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250323 identified by Glimmer3 with a raw
FT                   score of 12.00. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31054.1"
FT                   /translation="MSKKIALITGVTGQDGAYLSEFLLNKGYEVHGIKRRTSLFNTDRI
FT                   DHLFEGHHNKANDFYLHYGDMTDSMNLTRIVAEIKPDEIYNLAAMSHVHVSFETPEYTA
FT                   NADGIGTLRILDAVRFLGLSEKTRIYQASTSELFGKVQETPQNEKTPFYPRSPYAVAKM
FT                   YAYWITVNYREAYNMFACNGILFNHESPVRGETFVTRKITRAVAKIALNLQDVLYLGNL
FT                   DAKRDWGHAKDYVKMMWMILQYHKAEDWVIATGKTTMVRDFVRLAFKYCGIELEFKGCG
FT                   IDEKGFVAKLDKDRAKELGLELSHLKIGQALVAVDKRYFRPTEVDLLLGDPSKAEKELG
FT                   WSRDFDLKDLVEDMMQSDLKLMTKDVYLKQGGYKIMRYYE"
FT   gene            complement(1202300..1203670)
FT                   /locus_tag="C1336_000250324"
FT                   /note="C1336_000250324 identified by Glimmer3 with a raw
FT                   score of 11.80."
FT   CDS             complement(1202300..1203670)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250324"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000250324 identified by Glimmer3 with a raw
FT                   score of 11.80. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31055.1"
FT                   /translation="MVNILLCGGGGTRLWPLSRALMPKQFIQIFNNKSLFELSYERNSK
FT                   ICSQILIVSNQEQYFLALDQLKIDKNINYLLEPISKNTAAAITLACFSLSKKELVLVTP
FT                   SDHLIKNESNYHKVVEKATKLAKEDKIITFGIKPNYPETGYGYIEFECNEVLRFYEKPD
FT                   LNTAKEFIKKGNFLWNSGMFVFKVDLFLKQMQKYAKDIYDRCYVAYKNSLKTENFIKIQ
FT                   KEDMEKIPSLSIDYALMEKSDSIKVVPSDIDWSDVGSFESLAKEFPKNENENFSNIKTK
FT                   FVDSKNNFIFSNNKKKFIATIDLNDFVIVDTDDALLISKKESTQKVRLVYESIQKDEDL
FT                   SKNHLVTHRPWGTYTILEDEKGYKIKRIEVKPGKRLSLQKHFHRNEHWIVLSGTASVEV
FT                   EGVKTLVRPNESTYIQMGQTHRLSNEGKIPVVLLEAQVGEYTKEDDIVRFEDDFERK"
FT   gene            complement(1203703..1204530)
FT                   /locus_tag="C1336_000250325"
FT                   /note="C1336_000250325 identified by Glimmer3 with a raw
FT                   score of 9.63."
FT   CDS             complement(1203703..1204530)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250325"
FT                   /product="lipooligosaccharide biosynthesis
FT                   glycosyltransferase"
FT                   /note="C1336_000250325 identified by Glimmer3 with a raw
FT                   score of 9.63. Gene function extrapolated from C8J_1091
FT                   (CP000814.1) after blastn alignment (98.99 percent identity
FT                   over a 99 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31056.1"
FT                   /translation="MPQLSIIIPLFNSCDFISRALQSCINQTLKDIEILIIDDKSKDNS
FT                   LNMVLEFAKKDPRINIFQNEENLGTFASRNLGVLHSSSDFIMFLDSDDFLTLDACETAF
FT                   KEMKKGFDLLCFDAFVHRVKTKQFYRFKQDEVFNQKEFLDFLSKQRHFCWSVWAKCFRK
FT                   DMILKIFEKVKIDERLSYGEDVLFCYVYFMFCDKIAVFKTCIYHYEFNPNGRYENKNKE
FT                   ILNQNYQDKKKSNELIKRLSKGFLHDEFHQKLFEVLEKEEKDLNSRYLKENLI"
FT   gene            1204589..1205539
FT                   /locus_tag="C1336_000250326"
FT                   /note="C1336_000250326 identified by Glimmer3 with a raw
FT                   score of 8.04."
FT   CDS             1204589..1205539
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250326"
FT                   /product="ADP-heptose--LPS heptosyltransferase II"
FT                   /note="C1336_000250326 identified by Glimmer3 with a raw
FT                   score of 8.04. Gene function extrapolated from
FT                   CJJ81176_1164 (CP000538.1) after blastn alignment (96.24
FT                   percent identity over a 905 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31057.1"
FT                   /translation="MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALF
FT                   KEFPNSKIIIENKQSRYKQALSLRKEFGKIDLSFAFRSAFSSKIILHILKTKQRYFFDK
FT                   NKHKEEHQVLKYLYFIENSLDIKAHFKNLKLPFKLKFQAPLVLKNGKKILGLNPGASFG
FT                   SAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVRNLCNKTTI
FT                   KTLCQNIAFCDLFITNDSGPMHISAVYKVKTVAIFGPTKFTQTSPWQNKNVKLVHLGLA
FT                   CMPCMQKTCPLKHHKCMKDLKPERVIVEARNLLKL"
FT   gene            complement(1205525..1206076)
FT                   /locus_tag="C1336_000250327"
FT                   /note="C1336_000250327 identified by Glimmer3 with a raw
FT                   score of 7.22."
FT   CDS             complement(1205525..1206076)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250327"
FT                   /product="putative lipooligosaccharide biosynthesis
FT                   glycosyltransferase"
FT                   /note="C1336_000250327 identified by Glimmer3 with a raw
FT                   score of 7.22. Gene function extrapolated from
FT                   JJD26997_0581 (CP000768.1) after blastn alignment (94.71
FT                   percent identity over a 189 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31058.1"
FT                   /translation="MFFVSHYKLWQECVKLDEPIIILEDDVEFSDEFLNNGEEYIDGLL
FT                   KSEYEYIRLCYLFDKRLYFLSESYGGGGYYLSFKNLSGTQGYVLKPSAAKKIISKAQFI
FT                   YMSVDDYMDKIYKHKVLNIIKKPLLLKHSLELQSNISQLGRNSQKIKIYRKIIREIFRF
FT                   YSSILRLSSIIYIKNRLKLK"
FT   gene            complement(1206064..1206252)
FT                   /locus_tag="C1336_000250328"
FT                   /note="C1336_000250328 identified by Glimmer3 with a raw
FT                   score of 17.69."
FT   CDS             complement(1206064..1206252)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000250328"
FT                   /product="lipooligosaccharide biosynthesis
FT                   glycosyltransferase, putative"
FT                   /note="C1336_000250328 identified by Glimmer3 with a raw
FT                   score of 17.69. Gene function extrapolated from CJE1284
FT                   (CP000025.1) after blastn alignment (98.86 percent identity
FT                   over a 88 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC31059.1"
FT                   /translation="MKKQIQKLFEKNPSLKNKLEFIFFKAIDAKNKEHLEFKDHFPWWG
FT                   SWVYGKDLDLGNTACFL"
FT   gap             1206303..1207652
FT                   /estimated_length=1350
FT   gene            complement(1208879..1209832)
FT                   /locus_tag="C1336_000260000"
FT                   /note="C1336_000260000 identified by Glimmer3 with a raw
FT                   score of 15.31."
FT   CDS             complement(1208879..1209832)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260000"
FT                   /product="ADP-L-glycero-D-mannoheptose-6-epimerase"
FT                   /note="C1336_000260000 identified by Glimmer3 with a raw
FT                   score of 15.31. Gene function extrapolated from
FT                   CJJ81176_1168 (CP000538.1) after blastn alignment (96.02
FT                   percent identity over a 954 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30591.1"
FT                   /translation="MRIAITGGAGFIGSQLALNLQEKHEILIIDKMRSSATFENGNLQS
FT                   FGHFKNLLEFDGELFAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVFDQTKVLQTNLN
FT                   TFKDFIELSIDLNAKLIYASSASVYGDAKSPQTVGKDEEPKNPYAFSKLMMDKLAKKYY
FT                   DKAHLVGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDKIYRDFTYIKD
FT                   VISANLIALDSKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSYQFHTE
FT                   AKLDQTWDYQPKFTLEEGVKDYLGEIKRLFEKEVNA"
FT   gene            complement(1209833..1210360)
FT                   /locus_tag="C1336_000260001"
FT                   /note="C1336_000260001 identified by Glimmer3 with a raw
FT                   score of 15.03."
FT   CDS             complement(1209833..1210360)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260001"
FT                   /product="hydrolase, putative"
FT                   /note="C1336_000260001 identified by Glimmer3 with a raw
FT                   score of 15.03. Gene function extrapolated from CJE1288
FT                   (CP000025.1) after blastn alignment (97.65 percent identity
FT                   over a 85 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30592.1"
FT                   /translation="MFFMKTKALFLDRDGVINIDKKYVYKIEDFEFCDGIFELCRYFLA
FT                   RNYLLFIATNQSGIARGYYKESDFFKLCDYMLKEFAKQDIKIDKIYHCPHLEGCECRKP
FT                   KAGMLLKAEDEFDLDMKNSIFIGDNLSDMQAGLNADIGTLILVNEEKKEGDFFRQFKNL
FT                   KEILSFFKEKDI"
FT   gene            1210475..1210777
FT                   /locus_tag="C1336_000260002"
FT                   /note="C1336_000260002 identified by Glimmer3 with a raw
FT                   score of 12.43."
FT   CDS             1210475..1210777
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260002"
FT                   /product="putative periplasmic cytochrome c"
FT                   /note="C1336_000260002 identified by Glimmer3 with a raw
FT                   score of 12.43. Gene function extrapolated from C8J_1099
FT                   (CP000814.1) after blastn alignment (99.34 percent identity
FT                   over a 303 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30593.1"
FT                   /translation="MKKLLVVSALACLGVSAFAADGATLFKKCAVCHGANADKVYLNKV
FT                   PALKTLSSAERLQYMKEYSEGKRNAYGQGAIMKLNLKGLTEEDFKAIEAHIETLK"
FT   gene            complement(1210800..1211006)
FT                   /locus_tag="C1336_000260003"
FT                   /note="C1336_000260003 identified by Glimmer3 with a raw
FT                   score of 16.11."
FT   CDS             complement(1210800..1211006)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260003"
FT                   /product="cytochrome oxidase maturation protein, cbb3-type,
FT                   putative"
FT                   /note="C1336_000260003 identified by Glimmer3 with a raw
FT                   score of 16.11. Gene function extrapolated from CJE1290
FT                   (CP000025.1) after blastn alignment (98.94 percent identity
FT                   over a 189 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30594.1"
FT                   /translation="MNSIIMMMIGVSILAFFIILATLLWGIKNKQFDDDYKFTTLNDDE
FT                   DSLRDAIELERRKKEALDKKRLS"
FT   gene            complement(1211003..1213354)
FT                   /locus_tag="C1336_000260004"
FT                   /note="C1336_000260004 identified by Glimmer3 with a raw
FT                   score of 15.20."
FT   CDS             complement(1211003..1213354)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260004"
FT                   /product="heavy metal translocating P-type ATPase"
FT                   /note="C1336_000260004 identified by Glimmer3 with a raw
FT                   score of 15.20. Gene function extrapolated from
FT                   CJJ81176_1172 (CP000538.1) after blastn alignment (97.63
FT                   percent identity over a 465 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30595.1"
FT                   /translation="MKCEHCRLDYKQAQMIEYKGNFFCCKGCESVWEILHESGLDEFYE
FT                   KLGNQTLSPVNFQNEMKNYDEFITKTKEGFSEIYLMIHGIECAACVWLNEKILTKQEGI
FT                   LELDINHLSHKARIVFDEQSISLVQILRLIESIGYKASAYDASKVSKKADLLKREFYSK
FT                   LVVAIACVMNIMWIAVAKYAGFFSGMDKDTKDILNFAEFILCSPVLFYTGSHFYKSAFK
FT                   TLKMHSLNMDVLVISGASLAYFYSLWAMFFRVGEVYFDSVAMIVCFVFIGKYLEMFSKK
FT                   RALDTIDGLNDFLQNEVLVFNGKEFVPKEVQKVCLGDRVLLKTGDKILIDGICKSGEMS
FT                   VDTSSLNGENAPKLIQKEDEIFSACIVLDGSVEYEATKLYKDSKLSQIIQLLELASSKK
FT                   AKLESLVNSLSAYFSRTVLLIAFVCFAFWFFYKEESFEISLVNAIAVLIIACPCALALA
FT                   TPVSNLVALGRALKKHILFKSSSVIEDLSKCDCVVFDKTGILTKIELELKEVFLDKALD
FT                   LNELYNFVKLSKHPISQNIVLYLKQKGAKDLNLDFKKHSSIQAKGLSAELNEELLLGGS
FT                   SKFLQEKGIVTKEFDNTHFIFAKEGKILAFFEFDSVLREGAKELITYLKKEKKELMILS
FT                   GDHQKAVEKIARKLEIQNYQASCLPEDKMKTIEKLSKNYKVLFVGDGVNDALALKYASV
FT                   SMTLREGSDLAIESSDVLLLKNDLLSLKKAIKLSKNTFKIIKQNLAFSLFYNACTIPLA
FT                   FLGMINPLFAAISMSFSSIIVVLNALRIKE"
FT   gene            1213469..1214767
FT                   /locus_tag="C1336_000260005"
FT                   /note="C1336_000260005 identified by Glimmer3 with a raw
FT                   score of 13.19."
FT   CDS             1213469..1214767
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260005"
FT                   /product="transcription termination factor Rho"
FT                   /note="C1336_000260005 identified by Glimmer3 with a raw
FT                   score of 13.19. Gene function extrapolated from
FT                   JJD26997_0572 (CP000768.1) after blastn alignment (97.50
FT                   percent identity over a 1281 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30596.1"
FT                   /translation="MEKEKKQHQRTHVPVEGYKIEELKLLDLENLVKIANECEIENPRE
FT                   FRRQELIFEILKAQTKKGGFILFTGILEISSEGYGFLRGMDSNLSDSVNDAYVSNSQIR
FT                   KFALRVGDIVTGQVREPKDQEKYYALLKIEAINYLPLQEAKERPLFDNLTPIFPTEKIK
FT                   LEYDAMKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELATAIAKNHPEMHLIVLL
FT                   VDERPEEVTDMQRCVKGEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVIILLDSI
FT                   TRLARAYNTATPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSR
FT                   MDDVIFEEFKGTGNSEIVLDRNIADRRIYPAINIIKSGTRKEELLQGVANLQKIWAIRS
FT                   AISQMDDVEALKFLYSKMLKTKDNVELLSIMNE"
FT   gene            1214771..1216303
FT                   /locus_tag="C1336_000260006"
FT                   /note="C1336_000260006 identified by Glimmer3 with a raw
FT                   score of 14.52."
FT   CDS             1214771..1216303
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260006"
FT                   /product="DNA polymerase III"
FT                   /note="C1336_000260006 identified by Glimmer3 with a raw
FT                   score of 14.52. Gene function extrapolated from C8J_1103
FT                   (CP000814.1) after blastn alignment (96.88 percent identity
FT                   over a 384 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30597.1"
FT                   /translation="MLQALAIKYRPKTFDELIGQKTVSVSLKYALNHNRLAHAYLFSGL
FT                   RGSGKTSSARIFSRALVCEQGPSDTPCGTCKHCLAALEGKHIDIIEMDAASNRGLEDIQ
FT                   TLIEQTKYTPSMARFKIFIIDEVHMLTPQAANALLKTLEEPPSYVKFILATTDPLKLPA
FT                   TVLSRTQHFRFKQIPQSEILNHLKEILLKENVKFEEEALKFIARSGNGSLRDTLTLLDQ
FT                   AIIFCQNEISISKITDMLGFLDPQKIKAFYQAILTKDKEKVFTYLEELQDYEASSVIDE
FT                   MLFYLKESFFAKSTEFSTLIYERFFRILSKAKNMLCDDDGFTLCVMAFMMMEASHLKEI
FT                   DAQIQEIKQENITNTTPKITPSPIMPNLEKKIEKNAYEILLDSIYDRDFDLAECFKQST
FT                   KFISFESNTLNISSNAQGKNRDTLNKGFKLIQELFKAKFGENAKINVQKALTIDENKLQ
FT                   SLTQELPNSENKNNIQSSINMLKEGAKKFDPQEDLKEALKDCFGNPQIQNID"
FT   gene            1216378..1218279
FT                   /locus_tag="C1336_000260007"
FT                   /note="C1336_000260007 identified by Glimmer3 with a raw
FT                   score of 9.40."
FT   CDS             1216378..1218279
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260007"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260007 identified by Glimmer3 with a raw
FT                   score of 9.40. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30598.1"
FT                   /translation="MQRRDFLNGMALAVVAGMTPLQLLYGKDSKIEDFTKEYYPPNLLG
FT                   LRGSNNKSYKYAHMLRDGDKFGFSSIKPKEKYDLVIVGAGISGLAAACFYQQKFGENKK
FT                   ILILDNHDDFGGHARRNEIQLDEGTILSYGGSESFQSPKALYSKEVIELLKSLGVSIDE
FT                   LAKRFDVNFYPDLKLSRGVYFSKENFGVDKVVNGNPRKVICDDIPDSKNNGKSIENFIK
FT                   DFPMTSKDKRELISLFKSNKDYLKGLSKEEKEEYMAKTSYKKFLEEKVKLSQKAITFFE
FT                   GMTDDFLALGIDAISCEDARISFLPGFDKLGLDPIEGEALAEMEEPYIYHCADGNATVA
FT                   RLMVRKLIPTVSQKGKDMDDITLAHFDYSKLDDPNNKVRLRLNSTVIHVENTKNGTLIS
FT                   YINQGKKYRIKAKNVVMANYNSMIPYIIPSLPKEQKEALSKNVKTSLLHTKVIISNWEP
FT                   FIKLGVHEIYSPKMPYARTKLDYPVDMGGYHHPRDPKKPICIHMVCSPLALANIQGIDL
FT                   EGLDARDRARVGRNLLFTMSFKEHEKIIREQLQGMLGSAGFNHEKDILAIVVNRWGHCY
FT                   SYTENSLYDDPKIAEQTRLIARKPFGNIVIANSDSDWSAYMHSAIDQAYRAINEIKA"
FT   gene            complement(1218269..1220374)
FT                   /locus_tag="C1336_000260008"
FT                   /note="C1336_000260008 identified by Glimmer3 with a raw
FT                   score of 16.30."
FT   CDS             complement(1218269..1220374)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260008"
FT                   /product="copper-translocating P-type ATPase"
FT                   /note="C1336_000260008 identified by Glimmer3 with a raw
FT                   score of 16.30. Gene function extrapolated from CJE1295
FT                   (CP000025.1) after blastn alignment (98.56 percent identity
FT                   over a 347 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30599.1"
FT                   /translation="MEELRIKIGKMTCVNCSNAIERACKKIDGVKDASVSYVNSSGVFL
FT                   LEDQEKRKDIIAKIKNLGFEILEDEQSLNAYKAKKHLELRKNLLLSIVLSVIIMYFEMF
FT                   VKSSFSQNIQMALSFFGIFYCGRDFFSHAFLGLKSKNLDMNTLVALGTLSAFVYSFLVY
FT                   LQIFKEEDLYFSGAMMIISFVLLGKYLESKAKFKAQDYQRILENIDTKKTKILLEDESI
FT                   KEIPSSFVKSGDVLLVKEGESIVADGVVLLGSAELDMSFLNGEFLPVLKKEGDEVQAGA
FT                   VVLNGALRIKANKKAMDSTLEQIKNLVFEAGNIKSPLANLADQISKYFVGGIIFFAFLV
FT                   FVFWAVKADLNTAFLHACAVLLISCPCALGLATPIALVVASANAAKNFILIKNPAALEK
FT                   LALVKYAFFDKTGTLTKENLSIFKHNLSKDDFDKLCQIESLSSHPIAKALHKDQIFDLK
FT                   GEGRVIVGSGIKYKEDNNIYLVGSAEFLHKNEVDTKESDIFFDSFKEYVRVYFAKNKKC
FT                   LGGVLLSNALKDGAKELVLNLKKQNLKTFILSGDHIKNVEKIAKELQIDEFHAQLKSEE
FT                   KLQIIQKFKKTLFVGDGINDAAALSAASASMSFSKANELAKKTGDFILIKDDLSAIFKC
FT                   FKLAKKTRSIIKLNLFWAFIYNVLCIPIAAGFVPFITLSPHIAALAMCFSSVAVVLNSL
FT                   RLRKSKP"
FT   gene            complement(1220374..1220568)
FT                   /locus_tag="C1336_000260009"
FT                   /note="C1336_000260009 identified by Glimmer3 with a raw
FT                   score of 15.67."
FT   CDS             complement(1220374..1220568)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260009"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260009 identified by Glimmer3 with a raw
FT                   score of 15.67. Gene function extrapolated from C8J_1106
FT                   (CP000814.1) after blastn alignment (96.92 percent identity
FT                   over a 195 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30600.1"
FT                   /translation="MKFKVKNVNCIGCVNLIKNSLEDEFGNIEVDLEQKILSLNLEENQ
FT                   VSNFTKEFQDLGFEIIERL"
FT   gene            complement(1220558..1221508)
FT                   /locus_tag="C1336_000260010"
FT                   /note="C1336_000260010 identified by Glimmer3 with a raw
FT                   score of 11.53."
FT   CDS             complement(1220558..1221508)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260010"
FT                   /product="cation efflux family protein"
FT                   /note="C1336_000260010 identified by Glimmer3 with a raw
FT                   score of 11.53. Gene function extrapolated from C8J_1107
FT                   (CP000814.1) after blastn alignment (97.27 percent identity
FT                   over a 951 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30601.1"
FT                   /translation="MYKFLSHEPLANKSCNHNHEEHSHEHHHSHADARSMDKKILKISL
FT                   LMTFSMMLVQFIYSILSNSLALLSDTLHMFSDVFALALSFLAIIAVEKWQDHQKTFGYF
FT                   RLEVLVAFINALTIILSALFIIYEAIEKFINPKEIDAKTMIIVAILGFLANGVNALMMF
FT                   KGANLENVNMKSAFLHMMSDLLGSLVVIIGGIAVYFSGIVYIDTILAIVLSILLLRWAI
FT                   ILLKQSANVLLESSPVDIEKVRQVLLLNPSVDEVVDLHITQITNKMLVASMHLKVKVCD
FT                   LKEFEKLSQDLSHKLLHEFEIGHITIQPIRSENEI"
FT   gene            complement(1221583..1221846)
FT                   /locus_tag="C1336_000260011"
FT                   /note="C1336_000260011 identified by Glimmer3 with a raw
FT                   score of 6.80."
FT   CDS             complement(1221583..1221846)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260011"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260011 identified by Glimmer3 with a raw
FT                   score of 6.80. Gene function extrapolated from C8J_1108
FT                   (CP000814.1) after blastn alignment (96.18 percent identity
FT                   over a 262 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30602.1"
FT                   /translation="MLCPVCNVDLVMSDRSGVEIDYCPKCRGVWLDRGELDKIIERSVP
FT                   NAANFNQVSRQESRYNNSAYHQHNDYYKKKRKESWLGELFDF"
FT   gene            complement(1222033..1222413)
FT                   /locus_tag="C1336_000260012"
FT                   /note="C1336_000260012 identified by Glimmer3 with a raw
FT                   score of 13.60."
FT   CDS             complement(1222033..1222413)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260012"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260012 identified by Glimmer3 with a raw
FT                   score of 13.60. Gene function extrapolated from
FT                   CJJ81176_1180 (CP000538.1) after blastn alignment (98.12
FT                   percent identity over a 372 bp alignment) - for clarity,
FT                   the original product name 'membrane protein, putative' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30603.1"
FT                   /translation="MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSAILAAIAHGLRF
FT                   TLVEYFHFQTLAIATFVASFCIGCLGIVLAKIIKTPAEIIAFPALIPMIPGIYAYKAIL
FT                   YLISFIRSDDLKAKSEFLVQFF"
FT   gene            complement(1222410..1223186)
FT                   /locus_tag="C1336_000260013"
FT                   /note="C1336_000260013 identified by Glimmer3 with a raw
FT                   score of 9.46."
FT   CDS             complement(1222410..1223186)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260013"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000260013 identified by Glimmer3 with a raw
FT                   score of 9.46. Gene function extrapolated from Cj1166c
FT                   (AL111168.1) after blastn alignment (98.74 percent identity
FT                   over a 317 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30604.1"
FT                   /translation="MEKPDIQRLTNFLIIYTKTLLGAGTYTARVAKCVGRIAEVYGYEI
FT                   NINFFFHHITLNVVDMDDNSIQRTYVIPNHHAHVNFKLIFDLSVLSWAIYDHKYDLEKA
FT                   KVVFEQISQQKKHSYLLNLLFVSMANSAFCRLFGGDFGAGNLVFFATFVGLLLRYILTK
FT                   AKIDLRIQYILCSFISSWFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVIDILKD
FT                   HILMGLSRIISVAILICCIALGIYMTLSISDFGILR"
FT   gene            complement(1223267..1223866)
FT                   /locus_tag="C1336_000260014"
FT                   /note="C1336_000260014 identified by Glimmer3 with a raw
FT                   score of 12.68."
FT   CDS             complement(1223267..1223866)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260014"
FT                   /product="putative integral membrane protein (DedA-like
FT                   protein)"
FT                   /note="C1336_000260014 identified by Glimmer3 with a raw
FT                   score of 12.68. Gene function extrapolated from C8J_1112
FT                   (CP000814.1) after blastn alignment (98.99 percent identity
FT                   over a 593 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30605.1"
FT                   /translation="MQEIISFIVETASAWGYLGIIILMTLESCFIPFPSEVVMIPAGYL
FT                   AHKGELDITLCILSGTLGSVLGALINYYICFFWGKNFVLKWGKYFGINEAKFAKFEEFF
FT                   NKHGEFSTFTCRLLPGIRQYISMPAGLVKMKLINFILFTALGSAIWVAILVFLGYYIGQ
FT                   NEELIKTYLTQILIIIIVFVILASLIYIKIKKPFNK"
FT   gene            complement(1223947..1224174)
FT                   /locus_tag="C1336_000260015"
FT                   /note="C1336_000260015 identified by Glimmer3 with a raw
FT                   score of 14.02."
FT   CDS             complement(1223947..1224174)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260015"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260015 identified by Glimmer3 with a raw
FT                   score of 14.02. Gene function extrapolated from
FT                   CJJ81176_1184 (CP000538.1) after blastn alignment (99.12
FT                   percent identity over a 228 bp alignment) - for clarity,
FT                   the original product name 'conserved domain protein' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30606.1"
FT                   /translation="MRKILFASLLPIIALADCASLMAKYEAPEPESKTMKQVERWISKK
FT                   VSDPADAAVLKECMIARAADNPNQVSVAGK"
FT   gene            complement(1224185..1225615)
FT                   /locus_tag="C1336_000260016"
FT                   /note="C1336_000260016 identified by Glimmer3 with a raw
FT                   score of 12.62."
FT   CDS             complement(1224185..1225615)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260016"
FT                   /product="50 kda outer membrane protein precursor"
FT                   /note="C1336_000260016 identified by Glimmer3 with a raw
FT                   score of 12.62. Gene function extrapolated from Cj1170c
FT                   (AL111168.1) after blastn alignment (97.86 percent identity
FT                   over a 327 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30607.1"
FT                   /translation="MKTKFSLILSACLLSSSLFAKNTDDEITKLQKQLAQIQAELAQIR
FT                   KEREAQAKQNEAVKAELADLNDRADETEFQAALSKVKFGLEFSTAVSNTNYKVSGQDYS
FT                   ANNKWMNELHLNMNADINDKTKFYGRLSMAKNWSQMGWSGTPYDLDAGRNTRTSGPVLY
FT                   VDRAYLDYYITPEWIATIGRQPGTDGPGSNLRNNALRQSTYPALAINALGDAAVITYKP
FT                   ENLQDHKVAIRAAYGKTYQWDEEGKVRDWMSDQKDADANLYYAAVEGELPIEGMGDNLI
FT                   IFNVAHMTDFALPFPETNLPIGPSGTLVNVLQDGVYNLGNLTLANIHFENYNAFGTNFN
FT                   YFVSLGYSNGANAHTLHPNPAVQSLFEFNEKDGYAVHVGGRYDFTKALKVGYEFFWGSR
FT                   YWYTMSRPSINDPLNIRMTRGTAHDFYVIYQLDRYQFLRLSYTNIQNIWGNRGLPFGGA
FT                   KKDKARADNIMLMYNVKF"
FT   gene            complement(1225779..1226261)
FT                   /locus_tag="C1336_000260017"
FT                   /note="C1336_000260017 identified by Glimmer3 with a raw
FT                   score of 13.23."
FT   CDS             complement(1225779..1226261)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260017"
FT                   /product="peptidyl-prolyl cis-trans isomerase B"
FT                   /note="C1336_000260017 identified by Glimmer3 with a raw
FT                   score of 13.23. Gene function extrapolated from CJE1305
FT                   (CP000025.1) after blastn alignment (98.76 percent identity
FT                   over a 483 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30608.1"
FT                   /translation="MIKTIDTSKVNEYKFALIETEKGTMKLKLFGDEAPQTVCNFATLA
FT                   NEGFYKDLNFHRVIPNFVIQGGCPHGNGIGGPGYEIICECDDQEHKHERGTLSMAHAGR
FT                   DTGGSQFFICHSPQAHLDGVHTVFGQIDPKDEESLKVLDSIRQGDKILDIKICDKI"
FT   gene            complement(1226271..1226978)
FT                   /locus_tag="C1336_000260018"
FT                   /note="C1336_000260018 identified by Glimmer3 with a raw
FT                   score of 17.51."
FT   CDS             complement(1226271..1226978)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260018"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260018 identified by Glimmer3 with a raw
FT                   score of 17.51. Gene function extrapolated from
FT                   CJJ81176_1187 (CP000538.1) after blastn alignment (97.18
FT                   percent identity over a 708 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein
FT                   TIGR01033' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30609.1"
FT                   /translation="MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMNP
FT                   KLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDNPT
FT                   RTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGLEELEQ
FT                   NEEELVISGDYTAFGELSSAIETKGLILKKAGLEYIPNNPVSFSEEQLSDIEKLLDKLE
FT                   DDDDVQAVYTNID"
FT   gene            1227084..1227425
FT                   /locus_tag="C1336_000260019"
FT                   /note="C1336_000260019 identified by Glimmer3 with a raw
FT                   score of 10.92."
FT   CDS             1227084..1227425
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260019"
FT                   /product="putative efflux protein"
FT                   /note="C1336_000260019 identified by Glimmer3 with a raw
FT                   score of 10.92. Gene function extrapolated from C8J_1117
FT                   (CP000814.1) after blastn alignment (98.20 percent identity
FT                   over a 167 bp alignment).; overlaps another CDS with the
FT                   same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30610.1"
FT                   /translation="MNIAKKELFVAWFFLIVAIVFEVLGTSFLKMENQILGYIFMALFI
FT                   AFSYFFMGKAIKKIQVGIAYAVWELLGIILILLVSFIVFKESLTLTQILGIVLSIVGII
FT                   MINIGEVKE"
FT                   /artificial_location="low-quality sequence region"
FT   gene            1227425..1227733
FT                   /locus_tag="C1336_000260020"
FT                   /note="C1336_000260020 identified by Glimmer3 with a raw
FT                   score of 7.75."
FT   CDS             1227425..1227733
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260020"
FT                   /product="putative efflux protein"
FT                   /note="C1336_000260020 identified by Glimmer3 with a raw
FT                   score of 7.75. Gene function extrapolated from C8J_1118
FT                   (CP000814.1) after blastn alignment (98.75 percent identity
FT                   over a 160 bp alignment).; overlaps another CDS with the
FT                   same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30611.1"
FT                   /translation="MYIFIIVLSAFLDIIANLLLKKSDGFKHKIWGLAAIVNAILAFFL
FT                   LSFSLKYVPLSIAYSTWGAIGIIGTCLGGWILYKEKLNKIGILGIIIVIIAVFLLNY"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1227751..1229343)
FT                   /locus_tag="C1336_000260021"
FT                   /note="C1336_000260021 identified by Glimmer3 with a raw
FT                   score of 14.82."
FT   CDS             complement(1227751..1229343)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260021"
FT                   /product="arginyl-tRNA synthetase"
FT                   /note="C1336_000260021 identified by Glimmer3 with a raw
FT                   score of 14.82. Gene function extrapolated from C8J_1119
FT                   (CP000814.1) after blastn alignment (97.87 percent identity
FT                   over a 1593 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30612.1"
FT                   /translation="MKSIIFNEIKKILECDFTLENPKDKNLAHFATPLAFSLAKELKKS
FT                   PMLIASDLASKFQNHDCFESVEAVNGYLNFRISKTFLNELANQALANPNDFTKGEKKQE
FT                   SFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLS
FT                   ILLSVKENILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKML
FT                   VLIKQNLEQAKIKIDSYVSERSYYDALNATLESLKKHKGIYEQEGKIWLASSQKGDEKD
FT                   RVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN
FT                   LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDI
FT                   SDLQKEDSSNPVYYINYAHARIHQVFAKAGKTIDDVMGADLQSLNQDGVNLLFEALNLK
FT                   AILSDAFEARALQKIPDYLKNLAANFHKFYNENKVIGSANENDLLKLFSLVALSIKTAF
FT                   SLMGIEAKNKMEH"
FT   gene            complement(1229355..1229594)
FT                   /locus_tag="C1336_000260022"
FT                   /note="C1336_000260022 identified by Glimmer3 with a raw
FT                   score of 15.59."
FT   CDS             complement(1229355..1229594)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260022"
FT                   /product="putative sec-independent protein translocase
FT                   protein"
FT                   /note="C1336_000260022 identified by Glimmer3 with a raw
FT                   score of 15.59. Gene function extrapolated from C8J_1120
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 120 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30613.1"
FT                   /translation="MGGWSSPSHWLIILLIVVLLFGAKKIPELAKGLGKGIKTFKDEMN
FT                   NDDEVAKNTQKIEENKNTTNNTNADASIDETKKA"
FT   gene            complement(1229596..1230213)
FT                   /locus_tag="C1336_000260023"
FT                   /note="C1336_000260023 identified by Glimmer3 with a raw
FT                   score of 12.54."
FT   CDS             complement(1229596..1230213)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260023"
FT                   /product="guanylate kinase"
FT                   /note="C1336_000260023 identified by Glimmer3 with a raw
FT                   score of 12.54. Gene function extrapolated from C8J_1121
FT                   (CP000814.1) after blastn alignment (99.35 percent identity
FT                   over a 618 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30614.1"
FT                   /translation="MQGFILLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKPREG
FT                   EKNGIHYHFISHEEFQKGIDGDHFLEWAKVHENFYGTSLKHTQNALDNGKIVVFDIDVQ
FT                   GFKIARQKMADKIVSVFITTKNKDELKKRLIKRNTDTIIQLEKRLQNASDEMKELSDYD
FT                   YLIINDELKQSYEALRAILIAHKFRTKGQNLGQIQNIWNEGE"
FT   gene            complement(1230216..1231859)
FT                   /locus_tag="C1336_000260024"
FT                   /note="C1336_000260024 identified by Glimmer3 with a raw
FT                   score of 18.39."
FT   CDS             complement(1230216..1231859)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260024"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260024 identified by Glimmer3 with a raw
FT                   score of 18.39. Gene function extrapolated from C8J_1122
FT                   (CP000814.1) after blastn alignment (99.01 percent identity
FT                   over a 907 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30615.1"
FT                   /translation="MKILLLNENPVVSRLVSLSAKKMSYDFEELNAYSENLGNYDVIVV
FT                   DSDTPAPLKILKEKCDRLIFLAPRNQNVEDIDAQILQKPFLPTDFLNLLNNKDTNKHTS
FT                   IDLPMLSNDENPYADISLDLDNLNLDDLPDENSLDINSDGMEDLSFDDDAQDDNANETL
FT                   ETQNLEDENLEQEATKEQTQEDIQTDLDLTLEDGGSEKEDLSQEHTALDTEPSLDELDD
FT                   KNDEDLEIKEDDKNEEIKKQELLNDSKANTLEMQEELNESQDDNANETLETQNLEDENL
FT                   EQETTKEQNQEDIQTDLDLTLEDGGSEKEDLSQEHTALDTEPSLDELDDKNDEDLEDNK
FT                   ELQANISDFDDLPVVEEQEKEMDFDDIPEDAEFLGQAKDNEESEENLEEFAPVVEEDVQ
FT                   DEMDDFISNLSTQDQIKEELAQLDELDYGIDSDNSSKVLEDFKDEPILDDTELGTNEEE
FT                   VVVPNLNISDFDALKESDIQEALGEEIVEKNEEPIVSNATKDDNSEEIVNELSQSIAGA
FT                   ITSSIKDDTLKAALKGMNMNININISFKED"
FT   gene            complement(1231916..1232683)
FT                   /locus_tag="C1336_000260025"
FT                   /note="C1336_000260025 identified by Glimmer3 with a raw
FT                   score of 11.57."
FT   CDS             complement(1231916..1232683)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260025"
FT                   /product="flagellar biosynthetic protein FliR"
FT                   /note="C1336_000260025 identified by Glimmer3 with a raw
FT                   score of 11.57. Gene function extrapolated from
FT                   CJJ81176_1194 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 79 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30616.1"
FT                   /translation="MEFVNYLGDKNVVTFMLLLARMSGLIVFFPFFSHNSIPMVIKSTI
FT                   VLFLTMYLYPLARLESLHLDSFFVLQLISEVIFGMIAGLMLQIIFAIIMMAGEQIAFTM
FT                   GFTMASILDPSSGTSMPITSQILNLLALMFFLAFDGHHLMLLFLSHSLGYISLGGFYPH
FT                   ENLMHYLNMGMFNIFIIGFTMSFPILGISLLADVIFGLLMKTMPQFNLLVIGYPIKIAL
FT                   GFVVLIAILLVMMQYFKNLILELFTHMQTLFFS"
FT   gene            complement(1232670..1233305)
FT                   /locus_tag="C1336_000260026"
FT                   /note="C1336_000260026 identified by Glimmer3 with a raw
FT                   score of 12.60."
FT   CDS             complement(1232670..1233305)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260026"
FT                   /product="ABC transporter, ATP-binding protein"
FT                   /note="C1336_000260026 identified by Glimmer3 with a raw
FT                   score of 12.60. Gene function extrapolated from
FT                   CJJ81176_1195 (CP000538.1) after blastn alignment (98.58
FT                   percent identity over a 636 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30617.1"
FT                   /translation="MELLRAENLSHSFDYPLFEGLNLTLNTKDCIAIQGSSGCGKSTLL
FT                   HILSSLLIPKKGEVFFKGSSLYQIDENKRLKIRRYDFGIIFQTHYLFKGFSALENIELA
FT                   SVLSGQNLDEKILKRLGIDTLLHQKIGKLSGGQQQRVSIARVLCKKPKIIFADEATGNL
FT                   DFDNAKNVIELLISYVKENDAALFFVTHDSKLASFCDKTYTINANGIC"
FT   gene            complement(1233318..1234391)
FT                   /locus_tag="C1336_000260027"
FT                   /note="C1336_000260027 identified by Glimmer3 with a raw
FT                   score of 17.08."
FT   CDS             complement(1233318..1234391)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260027"
FT                   /product="elongation factor TS"
FT                   /note="C1336_000260027 identified by Glimmer3 with a raw
FT                   score of 17.08. Gene function extrapolated from Cj1181c
FT                   (AL111168.1) after blastn alignment (99.21 percent identity
FT                   over a 760 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30618.1"
FT                   /translation="MAEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREKG
FT                   LGKAAKKADRLAAEGLVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHIQS
FT                   NSLQSVEELHSSTINGVKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHTNGR
FT                   VGVVIAAACDSAEVASKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALVAELE
FT                   KENEERRRLKDPNKPEHKIPQFASRKQLSDAILKEAEEKIKEELKAQGKPEKIWDNIIP
FT                   GKMNSFIADNSQLDSKLTLMGQFYVMDDKKTVEQVIAEKEKEFGGKIKIVEFICFEVGE
FT                   GLEKKTEDFAAEVAAQL"
FT   gene            complement(1234391..1235182)
FT                   /locus_tag="C1336_000260028"
FT                   /note="C1336_000260028 identified by Glimmer3 with a raw
FT                   score of 15.49."
FT   CDS             complement(1234391..1235182)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260028"
FT                   /product="30S ribosomal protein S2"
FT                   /note="C1336_000260028 identified by Glimmer3 with a raw
FT                   score of 15.49. Gene function extrapolated from Cj1182c
FT                   (AL111168.1) after blastn alignment (99.02 percent identity
FT                   over a 410 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30619.1"
FT                   /translation="MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTL
FT                   RYFRYTYNIVREAAAEGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGT
FT                   IRQSIRKLEVIEKMEEDGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVVD
FT                   TVKEKIAVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEG
FT                   KALREQDGEALPNEEKEITDEEKKEVLDEAMSEEDFSEEQE"
FT   gene            complement(1235298..1236462)
FT                   /locus_tag="C1336_000260151"
FT                   /note="Features C1336_000260029, C1336_000260030 joined to
FT                   form C1336_000260151 to correct 454 sequencing error
FT                   (C1336_000260029 identified by Glimmer3 with a raw score of
FT                   12.02, C1336_000260030 identified by Glimmer3 with a raw
FT                   score of 15.41)."
FT   CDS             complement(join(1235298..1236326,1236328..1236462))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260151"
FT                   /product="putative cyclopropane-fatty-acyl-phospholipid
FT                   synthase"
FT                   /note="Features C1336_000260029, C1336_000260030 joined to
FT                   form C1336_000260151 to correct 454 sequencing error
FT                   (C1336_000260029 identified by Glimmer3 with a raw score of
FT                   12.02, C1336_000260030 identified by Glimmer3 with a raw
FT                   score of 15.41). Gene function extrapolated from
FT                   JJD26997_0546 (CP000768.1) after blastn alignment (99.64
FT                   percent identity over a 832 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30620.1"
FT                   /translation="MLEKTLIKSILKKWDYGDFRVVFWDKEEFFIGNKPAKFSLIFKEK
FT                   IPFLELFGDTSLVFARHYMQAKLDIEGDYDEMARVLYYFSNQQFFKTKKDVLSKITQKQ
FT                   ESKNIKSHYDIGNDFYKLWLDDTMSYSCAYFKEPNNTLYEAQINKIEHTLKKLDLKEGE
FT                   KLLDIGCGWGWLSIMAAQKYGVKVVGITISEEQCKKAKERVKELGLEDKIEIRLQNYQD
FT                   LEFENYFDKVVSVGMFEHVGKENLGLYFMKVKQVLKPGGSMLLHSILAMFEGKTNAWID
FT                   KYIFPGGYLPSLREVVSAMSEWDFHLLLAESLRMHYAKTLDLWDENFNKVLDKVREKYD
FT                   EEFIRMWDLYLRSCASAFRVGSVDLFQFLITKEINNNLSLTKDYIYK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1236590..1237714)
FT                   /locus_tag="C1336_000260031"
FT                   /note="C1336_000260031 identified by Glimmer3 with a raw
FT                   score of 15.83."
FT   CDS             complement(1236590..1237714)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260031"
FT                   /product="ubiquinol--cytochrome c reductase, cytochrome c1
FT                   subunit"
FT                   /note="C1336_000260031 identified by Glimmer3 with a raw
FT                   score of 15.83. Gene function extrapolated from C8J_1128
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 281 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30621.1"
FT                   /translation="MREIKIFLVVVVFTAFVYWGVEPYAHSVMKPHVAPANFDFAVEDT
FT                   TFAKGIVEAKELALKDAQASGDAKRIESANKELEKAKEELSKVETLWADVAKIDFAKGD
FT                   AKKGKEFFENNCFACHGLKEDGITANITDSSMGVIPPDLSAAGAIFDEKFLAALIMHPA
FT                   LALKVDHKFGDAFIMTAYNKDTSGESEEATNANIANVIAYLKDVSVKFEANEDATIKKD
FT                   VEAKYAKMENSAQKAALMEKDIKFAKDKATFIEACGRCHDMKYDSFFTPSNQNDLKTYL
FT                   GSVPPDLSMMIRSRGEQYLHDFINNTQKLLPGTAMPRVGLTEAAQAKVVSYIDQVGDSK
FT                   KEERKTTGIYVMIFFVILSIFAIGWKRSVWSKLH"
FT   gene            complement(1237711..1238961)
FT                   /locus_tag="C1336_000260032"
FT                   /note="C1336_000260032 identified by Glimmer3 with a raw
FT                   score of 9.47."
FT   CDS             complement(1237711..1238961)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260032"
FT                   /product="ubiquinol--cytochrome c reductase, cytochrome b
FT                   subunit"
FT                   /note="C1336_000260032 identified by Glimmer3 with a raw
FT                   score of 9.47. Gene function extrapolated from
FT                   CJJ81176_1200 (CP000538.1) after blastn alignment (99.19
FT                   percent identity over a 743 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30622.1"
FT                   /translation="MAQIRKANGLVDWLDQRLAIHKLLDVLMVKYWIPKQINFLWAMGV
FT                   ILTTLFAVLFVTGLLLVMYYKPDTALAFDSVNKTIMQEVDYGWLWRHMHGVAASVVFLI
FT                   IYIHMLTGIYYGSYKKGREMIWVSGMLLFVVFSAEAFSGYMLPWGQMSYWAAQVITNLF
FT                   GGIPFIGPELVIWIRGDYAVSDPTLTRFFMLHVCLLPIVIIAIIAFHFYSLRIPHVNNE
FT                   ISEELDFDLEAEKYMAGDTKGSKVIPFWPGFLSKDFMYISFFMIFFFYLVCFKFEFAMD
FT                   PINFDPANALKTPAHIYPEWYFLWSYEVLRGFFFDIAGIKAFDIGLAAFGIAQVIFFLL
FT                   PWLDRSDVVKPAHERPLFFIWFWILLIDLIVLTVYGKLPPTGVNAWVGFYASIVFLLLL
FT                   IVVLPVITIMERKGAKQ"
FT   gene            complement(1238963..1239466)
FT                   /locus_tag="C1336_000260033"
FT                   /note="C1336_000260033 identified by Glimmer3 with a raw
FT                   score of 14.76."
FT   CDS             complement(1238963..1239466)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260033"
FT                   /product="putative ubiquinol-cytochrome C reductase
FT                   iron-sulfur subunit"
FT                   /note="C1336_000260033 identified by Glimmer3 with a raw
FT                   score of 14.76. Gene function extrapolated from C8J_1130
FT                   (CP000814.1) after blastn alignment (99.60 percent identity
FT                   over a 504 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30623.1"
FT                   /translation="MATSESRRSFMGFAFGSVAAVGGVFSLVAMKKTWDPLPSVKAAGF
FT                   TTVDLSGMQDGELRTIEWRKKPIFILKKDASMPKDEKRDVVVDNAAYTVVIGLCTHLGC
FT                   IPAYQPSEQLFKCACHGGEFDTSGKNVFGPPPKPLEIPPFKIDGTKLVLGEEGPEYKKM
FT                   IAEA"
FT   gene            complement(1239556..1240842)
FT                   /locus_tag="C1336_000260034"
FT                   /note="C1336_000260034 identified by Glimmer3 with a raw
FT                   score of 13.95."
FT   CDS             complement(1239556..1240842)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260034"
FT                   /product="arsenical pump membrane protein"
FT                   /note="C1336_000260034 identified by Glimmer3 with a raw
FT                   score of 13.95. Gene function extrapolated from
FT                   CJJ81176_1202 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 78 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30624.1"
FT                   /translation="MLAFFIFLSTLILLFWRPWNLPIWVFSSLGAFFVFIFQLVDFKDA
FT                   YFVFSLVWDSSLTLVGLIILSFSLEALGFFDFIASKILHFSREKNQEKIYISTKKLMLF
FT                   LLIFVFFLSAFFANDGAILIITPIIIALFSTLKDCKNHAFILSSFLLSLSFLCDASSNA
FT                   LVISNLTNIITANYFKIEFLEFAKNMFLPNFFVLLSTIVMVFMLYGRVLPKRLEFKLVK
FT                   KEQISLKLFFLCIVFLLLFVISFFIGEIFDIKISFFALLWAGIFWLIVLKIQGKKSVKI
FT                   LFEAPYGVLLFSFGLYMVVFALHKIGVSEILVKSYAFLMQDKSGIFGVALISAFGSSVF
FT                   NNLPMVLIGDLALKEYFENFSFDSLMIYAHLLGVNIGPKLTPIGSLATLLWLGVLARKG
FT                   INISFWQYCKFGFLITLPVLVFSLFALIV"
FT   gene            complement(1240843..1242702)
FT                   /locus_tag="C1336_000260035"
FT                   /note="C1336_000260035 identified by Glimmer3 with a raw
FT                   score of 15.50."
FT   CDS             complement(1240843..1242702)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260035"
FT                   /product="glucose inhibited division protein A"
FT                   /note="C1336_000260035 identified by Glimmer3 with a raw
FT                   score of 15.50. Gene function extrapolated from CJE1322
FT                   (CP000025.1) after blastn alignment (98.00 percent identity
FT                   over a 100 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30625.1"
FT                   /translation="MFDVIVIGGGHAGVEASAAAARMGKKTLLLTTLIEQIGAASCNPA
FT                   IGGLAKGHLVKELDAMGGLMGEITDEAGIQFRILNESKGVAVQGSRAQIDMDKYRIIAR
FT                   NKLLKLPNLEISQEQANALIVENDEVKGVKTNLENTYFAKKVILTTGTFLNGLIHIGEN
FT                   KLQAGRVGELASVNLGNYLQTLGLKMGRLKTGTCPRVDAKSIDFSALEIQDGDVNPKAF
FT                   SFRSRNFNPTQLPCYIARTNTTTHEIIKNNFYRAPLFTGQIEGVGPRYCPSIEDKINRF
FT                   SDKESHHLFIEPQTIDATEYYINGFSTSLPYEVQTQMLRSVKGFENAKITRFGYAIEYD
FT                   YIEPTELKHTLELKKIKNLYCAGQINGTTGYEEAAAQGFMAGINASLSIDMKEPLILRR
FT                   DEAYIGVLIDDLVVKGTKEPYRMFTSRAEFRLLLREENAILRLGKYGYDLGLLSEQDFT
FT                   YIQNIANNLQKGLEFLLSKEFTPNNQNNAFLESLGEDKISSIVNLQKIVARASFDIEKL
FT                   KKLDPMFETMDHYSLREILNEAKYYHYISMQKAQVEKMKNLSELKIPENFDFKSVSGLS
FT                   NEVVEKLNHHKPPTIFAASQISGITPAALDILQIYIKMQKKKA"
FT   gene            complement(1242790..1243287)
FT                   /locus_tag="C1336_000260036"
FT                   /note="C1336_000260036 identified by Glimmer3 with a raw
FT                   score of 10.48."
FT   CDS             complement(1242790..1243287)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260036"
FT                   /product="putative signal-transduction sensor protein"
FT                   /note="C1336_000260036 identified by Glimmer3 with a raw
FT                   score of 10.48. Gene function extrapolated from C8J_1133
FT                   (CP000814.1) after blastn alignment (96.86 percent identity
FT                   over a 478 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30626.1"
FT                   /translation="MSREIFLQEDSLITSKTDLKGKIVYANDDFLKYAGYTMGEVLNKP
FT                   HNIVRHEEMPKTVFKYLWDYMREGKEIFAYVKNKTKDNNYYWVFANVTPSIDINNNIIG
FT                   YYSVRRMPNKSAISTIESLYSDLLRVEQQQGLNKGVEMLKNFCKDADKTYNELIFSLQE
FT                   AK"
FT   gene            complement(1243305..1244684)
FT                   /locus_tag="C1336_000260037"
FT                   /note="C1336_000260037 identified by Glimmer3 with a raw
FT                   score of 11.13."
FT   CDS             complement(1243305..1244684)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260037"
FT                   /product="methyl-accepting chemotaxis protein"
FT                   /note="C1336_000260037 identified by Glimmer3 with a raw
FT                   score of 11.13. Gene function extrapolated from CJE1324
FT                   (CP000025.1) after blastn alignment (98.99 percent identity
FT                   over a 99 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30627.1"
FT                   /translation="MVKNGLLLTIFLSIIGVLGAIFIHIYVGVIIFILIAVLMIYLLRQ
FT                   HKDEQIMIDKLLVLCRELKEGNFDNRMIYVKTKSKKLAEIADNLNNTIDGLEAYLREIN
FT                   TSISCSQKGEFYRKALPEGLKGIFAHNIEFINKALANIEVTARSTFKNALSRTLMDLSL
FT                   GNQNKDMSQISSSLNQDISMMKNVYDTVDAITHTATENGSEVDSLQSAMGSLMDVVNSS
FT                   KETVQTFVANSQNITSVVEVIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKL
FT                   AERTQRSTSEISIAIQTMQQDFVNIQSGSDQVFNIVSESEERINKFSQAFKRLEENSSA
FT                   LGVNFGSFAKRLILSVVKIDHILYKSNIYLNLNGAQNFNLESVDPISNLCQDERAQGVI
FT                   NELSSETELNLAKEFIKDNAKKAIEESSQDYIDQKAYDAIVNDIKSLEQRSAEILAKLK
FT                   I"
FT   gene            complement(1244802..1245296)
FT                   /locus_tag="C1336_000260038"
FT                   /note="C1336_000260038 identified by Glimmer3 with a raw
FT                   score of 10.25."
FT   CDS             complement(1244802..1245296)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260038"
FT                   /product="methyl-accepting chemotaxis protein"
FT                   /note="C1336_000260038 identified by Glimmer3 with a raw
FT                   score of 10.25. Gene function extrapolated from CJE1325
FT                   (CP000025.1) after blastn alignment (96.33 percent identity
FT                   over a 491 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30628.1"
FT                   /translation="MKEIVLSENALITSKTDLKGNIIYANNDFLQYAGYKVDELLYKSH
FT                   NIVRHEDMPRTVFKCLWDYIQKGEEIFAFVKNKAKDGSFYWVFANVSASFDANGDIINY
FT                   YSVRRAPNRKSLPIIEEVYKILLEKEQKSGINAGVSALMDIVSSYKMTYNELVFNLQED
FT                   N"
FT   gene            1245558..1246934
FT                   /locus_tag="C1336_000260039"
FT                   /note="C1336_000260039 identified by Glimmer3 with a raw
FT                   score of 10.94."
FT   CDS             1245558..1246934
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260039"
FT                   /product="C4-dicarboxylate transport protein"
FT                   /note="C1336_000260039 identified by Glimmer3 with a raw
FT                   score of 10.94. Gene function extrapolated from
FT                   JJD26997_0537 (CP000768.1) after blastn alignment (97.92
FT                   percent identity over a 1299 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30629.1"
FT                   /translation="METLSQTLAERKPPLYKRIIKSLGFWVIIGIITGIILGYTDKELA
FT                   IASKPGVDYFIGALKVLIGPIIFVTLVLGIISLESLKKVGSIGAKAVIYFEVVSTLALA
FT                   IGIFMANVMQPGHGMNLDPSQLDTKSVQKYISQTTEVSASSEIMHILKDAMPTDIITPF
FT                   TEGKTIQVLVIAIVTALIISLMRIEDKQAIQRVFEVVQNFVFKILQIIMYFSPIAAFSA
FT                   MAVLIAQYGIGSLINLAYLLLVMLISCLVFIFGILGLICYFAKVNIFKFMRFISREVLI
FT                   VFATSSSESALAPLMRKLEKAGLSKATVGLVLPTGYSFNLDCTNIYLAMSLIFLAQAFN
FT                   VNLSLTHEISILIVLMIASKGAVGVTGSGFIVLGSTLAALGNMEISEANATLAQVLPVA
FT                   AIGVLLGVDKFMSEMRAVGNLCGNSVAALIVAIWDKQIDQEKFNYAMDNPEKFHNAGMN
FT                   "
FT   gene            complement(1246931..1247737)
FT                   /locus_tag="C1336_000260040"
FT                   /note="C1336_000260040 identified by Glimmer3 with a raw
FT                   score of 10.57."
FT   CDS             complement(1246931..1247737)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260040"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000260040 identified by Glimmer3 with a raw
FT                   score of 10.57. Gene function extrapolated from C8J_1137
FT                   (CP000814.1) after blastn alignment (97.40 percent identity
FT                   over a 807 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30630.1"
FT                   /translation="MRGIFYIIALFSLLHADELAEALVKNNNQNSWEHFDYKNTKEAPK
FT                   IQEENVDFKSTFDSLLSKTLENNNGIDKTDGNLDFQNENAQVKNLSSLYEGENNSLLFQ
FT                   KELFVAQDNYNYSGGLINRYEKDEFLFGVNGFIDKQKEQKDTKSFGTEFGYSKFIKAYS
FT                   NYYIPNEAEKNLQLGMSFVIPTYTAFAFDISKDNDKTNYQVSYSPYSVFSLNLLRRDYS
FT                   ARETVDDTVVQVGFSFNFNESFLKQFRKKDNTLEEVNRYDFLQRTH"
FT   gene            1247878..1249404
FT                   /locus_tag="C1336_000260041"
FT                   /note="C1336_000260041 identified by Glimmer3 with a raw
FT                   score of 7.40."
FT   CDS             1247878..1249404
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260041"
FT                   /product="possible phosphate permease"
FT                   /note="C1336_000260041 identified by Glimmer3 with a raw
FT                   score of 7.40. Gene function extrapolated from C8J_1138
FT                   (CP000814.1) after blastn alignment (99.50 percent identity
FT                   over a 804 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30631.1"
FT                   /translation="MQKDNLIAFVIFIISTIAFVIWGFGYISQHQLILFILASIFGIFM
FT                   AFNIGGNDVANSFGTSVGAKTVTIKQALIIAAVFELSGAIFAGAEVTKTIRSGIVIFPN
FT                   SLDPMLFVIIMLAALLSSGVWIFIATKKGLPVSTTHSIVGGIVGASIMMGLLKFDGIQT
FT                   LSMVKWSEILRIAISWVASPLLGGIVAYIIYSYIDKKILKPSEKLNDDLKNIKKERKKF
FT                   KEEYFLNLKTKSQEEQIKELSAIALDEEEQENNFYRNKMKEFKDQEKDIDIYSILKTHM
FT                   PIIACIAAAIISAMFLFKGLNNVSTLDILQNFWIIGIIGTISYVVTFAIVKIVKKTELN
FT                   KTTDRIFSWFQIFTASSFAFSHGANDIANAIGPFAAILDVLKNGTINATSPVPFAALAM
FT                   FGVALVVGLWFLGKEVITTVGSKLATIRPTTGFSAELGASIVILLATQFGIPVSSTHIL
FT                   IGAILGIGVYNKNANWIMMKPIGLAWIITLPVAGIMAALVFLGFKLSLGI"
FT   gene            complement(1249412..1250590)
FT                   /locus_tag="C1336_000260042"
FT                   /note="C1336_000260042 identified by Glimmer3 with a raw
FT                   score of 16.24."
FT   CDS             complement(1249412..1250590)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260042"
FT                   /product="dihydroorotase, putative"
FT                   /note="C1336_000260042 identified by Glimmer3 with a raw
FT                   score of 16.24. Gene function extrapolated from C8J_1139
FT                   (CP000814.1) after blastn alignment (97.67 percent identity
FT                   over a 1117 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30632.1"
FT                   /translation="MIIKNAKIYGDSLQDIEIKEGKITNIGSNLQGEEILDAKGMTLLP
FT                   SFVDLCVSLKNDKFSLANLELLENECLKGGISSIVLRDCMDFDEESFALFLQNLAQRKM
FT                   QIFSSVRVKDANGKLKNLATLLNKGACALELDSSLDANTLKVSSQYAFMKDSPIFVRCY
FT                   DKDFDDNGVMNDCEMSFELGLIGMSKIAETSQIAKMKELAKFYKNKVIFDLLSLKDSLL
FT                   LLDEKDLKLVSIHHLIKDDSACEDFNTAAKLMPPLRSKEDVLALREALKEGKISFLTSL
FT                   HSAKSISLKDLAFDEAAFGIHSVCEFISLCYTFLIKEGFLNWQELCQFTSKNPSEFLGL
FT                   NSGVIEVGKEANLVLFDENEEIFAPKSSLYSEDKLFGKIKMHIIKGKNILEK"
FT   gene            complement(1250600..1251493)
FT                   /locus_tag="C1336_000260043"
FT                   /note="C1336_000260043 identified by Glimmer3 with a raw
FT                   score of 17.57."
FT   CDS             complement(1250600..1251493)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260043"
FT                   /product="glycerol-3-phosphate dehydrogenase,
FT                   NAD(P)-dependent"
FT                   /note="C1336_000260043 identified by Glimmer3 with a raw
FT                   score of 17.57. Gene function extrapolated from CJE1330
FT                   (CP000025.1) after blastn alignment (99.23 percent identity
FT                   over a 260 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30633.1"
FT                   /translation="MRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKEAL
FT                   ECEYLVFALSSQGMRAWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKENFCV
FT                   LSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGAYKNV
FT                   LAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGAKEETFLGLSGAGDLFLTATSV
FT                   LSRNYRVGLKLAQNQKLDSILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFK
FT                   GKSVQEATQNLLKQND"
FT   gene            complement(1251493..1252911)
FT                   /locus_tag="C1336_000260044"
FT                   /note="C1336_000260044 identified by Glimmer3 with a raw
FT                   score of 16.12."
FT   CDS             complement(1251493..1252911)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260044"
FT                   /product="aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase,
FT                   B subunit"
FT                   /note="C1336_000260044 identified by Glimmer3 with a raw
FT                   score of 16.12. Gene function extrapolated from CJE1331
FT                   (CP000025.1) after blastn alignment (97.46 percent identity
FT                   over a 1419 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30634.1"
FT                   /translation="MFEVVIGLEVHTQLNTKTKIFCSCATSFGEAPNTNVCPTCLALPG
FT                   ALPVLNEEVVKKAIAFGKAVNATINKKSVFNRKNYFYPDLPKAYQISQFDIPIVEKGEL
FT                   FINVKGENKRIGITRAHLEEDAGKNIHENNFSKVDLNRAGTPLLEIVSEPELRSSDEAV
FT                   AYLKKLHSIIRFLDISDANMQEGSFRCDANVSIRPKGDTKLYTRVEIKNLNSFRFIQKA
FT                   IEYEVKRQSEAWEDGTYEQEVVQETRLFDTTNLVTRSMRGKEEAAEYRYFPDPDLLPVL
FT                   LKDEFLDIKIPELPDEKKARFIDELGIKESDAEVLISSLEMSRFFESLISQNLNPKLCV
FT                   NWLNTELMGLLKGELTIENSPVDAQKLGVLIKRIEDGTISAKAAKDVLAFVFENTSMEI
FT                   DEAIEKLGLKQVSDDSAIEAVIEQILNANADKVAEYKSGKDKLFGFFVGQTMKEGKGAF
FT                   NPAKVNEILKAKLG"
FT   gene            complement(1253030..1253215)
FT                   /locus_tag="C1336_000260045"
FT                   /note="C1336_000260045 identified by Glimmer3 with a raw
FT                   score of 6.40."
FT   CDS             complement(1253030..1253215)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260045"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260045 identified by Glimmer3 with a raw
FT                   score of 6.40. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30635.1"
FT                   /translation="MIYILEFFKGASLALMLLCTFFLLFKFIFYFYLVLGFIFSLLLFL
FT                   VFMLFIENYELKNQKK"
FT   gene            complement(1253212..1253892)
FT                   /locus_tag="C1336_000260046"
FT                   /note="C1336_000260046 identified by Glimmer3 with a raw
FT                   score of 12.59."
FT   CDS             complement(1253212..1253892)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260046"
FT                   /product="ATP synthase F0 sector A subunit"
FT                   /note="C1336_000260046 identified by Glimmer3 with a raw
FT                   score of 12.59. Gene function extrapolated from Cj1204c
FT                   (AL111168.1) after blastn alignment (99.49 percent identity
FT                   over a 585 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30636.1"
FT                   /translation="MKDLFLFSSLLDASHTFSYFFHIGLVALIAVIVAMMATRSMQLVP
FT                   RGMQNLGEAFLEGVLSMGRDTMGSEKGARKYLPLVATLGIIVFFSNIIGIIPGFHAPTA
FT                   SLNLTLSLAIIVFVYYHFEGIRAQGFVKYFAHFMGPIKLLAPLMFPIEIVSHLSRVVSL
FT                   SFRLFGNIKGDDLFLMVILALVPYIAPLPAYVLLTFMAFLQAFIFMILTYVYLAGATVV
FT                   EEGH"
FT   gene            complement(1253961..1255301)
FT                   /locus_tag="C1336_000260047"
FT                   /note="C1336_000260047 identified by Glimmer3 with a raw
FT                   score of 16.70."
FT   CDS             complement(1253961..1255301)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260047"
FT                   /product="putative DNA repair protein RadA (ATP-dependant
FT                   protease)"
FT                   /note="C1336_000260047 identified by Glimmer3 with a raw
FT                   score of 16.70. Gene function extrapolated from Cj1205c
FT                   (AL111168.1) after blastn alignment (98.28 percent identity
FT                   over a 1341 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30637.1"
FT                   /translation="MAKNKALFECQACGNQQSKWLGKCPDCGAWDSFIELKAEQIKVLK
FT                   ELAQVSMKTSEAVCIEDVELEHFTRYSTDDNELDLVLGGGLVEGSLVLIGGSPGVGKST
FT                   LLLKIASNLAKQGKKVLYVSGEESKTQIKLRADRLEANTPNLFLLTELCLENILEELHK
FT                   KDYSILIVDSIQTLYSNKITSAAGSITQVREITFELMRVSKAYNISTFIIGHITKEGTI
FT                   AGPRVLEHMVDVVLYFEGDATKEIRLLRGFKNRFGGTNEVGIFEMTAKGLISAKDLANR
FT                   FFTRGKAISGSALGVVMEGSRALVLEVQALVCESSYPKRSATGYEKNRLDMLLALLERK
FT                   LEIPLGHYDVFVNISGGVKVSETAADLAVVAAIISSFKNRPLSKDSIFIGELSLNGEIR
FT                   EVFSLDTRLKEAKMQKFKNAIVPSKPLEDIGLKCFVAKELSQVLEWM"
FT   gene            complement(1255301..1256167)
FT                   /locus_tag="C1336_000260048"
FT                   /note="C1336_000260048 identified by Glimmer3 with a raw
FT                   score of 18.00."
FT   CDS             complement(1255301..1256167)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260048"
FT                   /product="signal recognition particle-docking protein FtsY"
FT                   /note="C1336_000260048 identified by Glimmer3 with a raw
FT                   score of 18.00. Gene function extrapolated from
FT                   CJJ81176_1221 (CP000538.1) after blastn alignment (98.59
FT                   percent identity over a 852 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30638.1"
FT                   /translation="MFNFFKKGLTKTLENIIGVKGENKKITKDLLEEILLEADVSYEIV
FT                   EEIVYYLPPQNEVKKEDLKRVMGSYFLYEKKETNQEKPFVELILGVNGAGKTTSIAKLA
FT                   YLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVDVDIVLTAQGHDPSAVAFDTISKAKA
FT                   KDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLDGTQGNAGILQAK
FT                   AFNELVKLDGVIITKLDGTAKGGALFSIARELELPIFYVGVGEQMTDLQEFNANAYLDT
FT                   LLDPIFE"
FT   gene            complement(1256167..1256724)
FT                   /locus_tag="C1336_000260049"
FT                   /note="C1336_000260049 identified by Glimmer3 with a raw
FT                   score of 8.90."
FT   CDS             complement(1256167..1256724)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260049"
FT                   /product="lipoprotein, putative"
FT                   /note="C1336_000260049 identified by Glimmer3 with a raw
FT                   score of 8.90. Gene function extrapolated from
FT                   CJJ81176_1222 (CP000538.1) after blastn alignment (95.94
FT                   percent identity over a 542 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30639.1"
FT                   /translation="MKIKKILLLVTISCLFVACSNDKEKQQNDVNLSTETSINQSDDMN
FT                   FKLNLIDGGSISVKKENAVLNFNDEDKATLFVFFTTWCTPCIAEIPHLNKLQEKYNNDF
FT                   NIVGVLLEDKSNEEIQKFIEQHKISYKVSNGENNYLLAKVLGGVNGIPTMFLYNKHSKL
FT                   INQYLGLIPEEMLEIDIQKAIL"
FT   gene            1256807..1257433
FT                   /locus_tag="C1336_000260050"
FT                   /note="C1336_000260050 identified by Glimmer3 with a raw
FT                   score of 5.94."
FT   CDS             1256807..1257433
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260050"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260050 identified by Glimmer3 with a raw
FT                   score of 5.94. Gene function extrapolated from C8J_1151
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 352 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30640.1"
FT                   /translation="MEKTDFRALQKIRLFKHSKLNFKQDYKIFKECLKIIKLFKAKNIL
FT                   IFIPLHYEPNLIKFRHILNKNYKLFVPFMQDKSLKIVKLRLPFIKKRFGVLEPIDSFFK
FT                   AKIDLAIVPVIGVDKNLKRIGHGQGFYDRFFENLNYKPHIIFVQSIDALSQNNLTQKHD
FT                   ISGKLYINPYKKYYKKERKNDRITYRTYSRYSRTRYRIFSCKKNQ"
FT   gene            1257354..1257536
FT                   /locus_tag="C1336_000260051"
FT                   /note="C1336_000260051 identified by Glimmer3 with a raw
FT                   score of 10.75."
FT   CDS             1257354..1257536
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260051"
FT                   /product="HD/HDIG/KH domain protein"
FT                   /note="C1336_000260051 identified by Glimmer3 with a raw
FT                   score of 10.75. Gene function extrapolated from
FT                   CJJ81176_1223 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 164 bp alignment).; overlaps
FT                   another CDS with the same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30641.1"
FT                   /translation="MIESLIALIAAIVGLGIGYLVAKKINDAKYEIFVEQAKAKAKAIE
FT                   YEAELILKDAKKFNS"
FT                   /artificial_location="low-quality sequence region"
FT   gene            1257514..1258908
FT                   /locus_tag="C1336_000260052"
FT                   /note="C1336_000260052 identified by Glimmer3 with a raw
FT                   score of 15.03."
FT   CDS             1257514..1258908
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260052"
FT                   /product="HD/HDIG/KH domain protein"
FT                   /note="C1336_000260052 identified by Glimmer3 with a raw
FT                   score of 15.03. Gene function extrapolated from
FT                   CJJ81176_1223 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 194 bp alignment).; overlaps
FT                   another CDS with the same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30642.1"
FT                   /translation="MQKNSILNAELEVKKKYEEKTHKIQKDFNQKFDDLSKKEQKLQQE
FT                   EEKLKEDKEYLCKSQKHIQNLQSDVDKLKNKYQEKLDDVLKILEHSTGLTQNEAKEIIL
FT                   KKVEENSREQIAHIVRKYEEEAKNEAKRKANFIIAQATSRFAGEFAAERLINVINIKND
FT                   ELKGRIIGKEGRNVKTLEMVLGVDIIIDDTPGAIIVSCFNLYRRAIATKVIELLVEDGR
FT                   IQPARIEEIHEKVCKEFDSAILEEGETIVMDLGLNKIHPEIVKLIGKLKYRASYGQNAL
FT                   AHSLEVAHLAGIIAAECGGDENLARRAGILHDIGKALTHDFEGSHVDLGAELCKRYKEH
FT                   PVVINAIYAHHGHEEAASIESAAVCAADTLSAARPGARREVLEAFLKRVSELEDIAKSK
FT                   EGIKNAYAINAGREIRVIANAQLVNDDESVLLAKEIAAEIQEKMQYPGEIKVNVIRELR
FT                   AVEYAK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            1258917..1259474
FT                   /locus_tag="C1336_000260053"
FT                   /note="C1336_000260053 identified by Glimmer3 with a raw
FT                   score of 13.32."
FT   CDS             1258917..1259474
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260053"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000260053 identified by Glimmer3 with a raw
FT                   score of 13.32. Gene function extrapolated from C8J_1153
FT                   (CP000814.1) after blastn alignment (98.94 percent identity
FT                   over a 473 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30643.1"
FT                   /translation="MQDMIDTLIKYGYIVLFFYSLGGGMVGILAAGVLSSQGKMDLSFC
FT                   ITLAFIANTIGSTLLFILGKYYKKDIMPYFKKHRRKLALAMMKTKQHGIILLVTQKFIY
FT                   GLKTFIPIAAGMAKYNFIKFFIINTLASLAWAIVLGFAAYTFGYVIEAVFDKLSLYPYT
FT                   APLFLLFLAGIIWLYLSKFSKK"
FT   gene            1259474..1260733
FT                   /locus_tag="C1336_000260054"
FT                   /note="C1336_000260054 identified by Glimmer3 with a raw
FT                   score of 3.00."
FT   CDS             1259474..1260733
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260054"
FT                   /product="ComEC/Rec2 family protein"
FT                   /note="C1336_000260054 identified by Glimmer3 with a raw
FT                   score of 3.00. Gene function extrapolated from CJE1345
FT                   (CP000025.1) after blastn alignment (99.01 percent identity
FT                   over a 202 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30644.1"
FT                   /translation="MSLWNSFFYSFKEFHYLFLSIVIIFIFNILLEYNNFLNFKNQKHY
FT                   FINNALLTHQYIKYNKKNKKYWVLKLQTENFTFYTTSFKDLNLSKNQLLSLRIITHNIN
FT                   FKDYLSKSFYAPSYDFKKLKEKEYNPIISYFLNQHTNEKIKEFYGALFFALPISLELRD
FT                   DVNYYGIAHLIAISGYHIGLLFSLVFFILAPIYSFFQKRYFPYRNLRLDLSILIFTLLL
FT                   AYACLIGFVPSFVRSLIMAFWVFYLLCKNIKIINFFTLFCSILLCISLYPRLLFSIGFL
FT                   FSILGVFYIFLYMHHFANKFNNLINIILLNIWTFFAMVLPVLYFFPLISYQQILGIILS
FT                   GIFVIFYPLVLFLHLINYGDLLNFILDEFFKFKIYGTNIHIPFWIFISYLIASLISVRF
FT                   KYLAFLCIFANFIPFIMIVI"
FT   gene            complement(1260677..1261483)
FT                   /locus_tag="C1336_000260055"
FT                   /note="C1336_000260055 identified by Glimmer3 with a raw
FT                   score of 7.17."
FT   CDS             complement(1260677..1261483)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260055"
FT                   /product="putative ribonuclease BN"
FT                   /note="C1336_000260055 identified by Glimmer3 with a raw
FT                   score of 7.17. Gene function extrapolated from C8J_1155
FT                   (CP000814.1) after blastn alignment (98.52 percent identity
FT                   over a 135 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30645.1"
FT                   /translation="MKNFFTILLNLRDKEILNYAAALSFYTVLSLIPILFVCFSVFTQI
FT                   SSFKAYYEKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFSGY
FT                   DFVINRIVKNEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNFFEI
FT                   LPFVIIWGLFFISYSSSVHKGTLRSLALVSFGAGAIWYIGKNLFVYYVVYNKTYASVYG
FT                   SFSTILFFFIWIYISWIIYLFGLKLYYFLNHNHNEGNKIRKNTKKS"
FT   gene            complement(1261487..1262869)
FT                   /locus_tag="C1336_000260056"
FT                   /note="C1336_000260056 identified by Glimmer3 with a raw
FT                   score of 15.97."
FT   CDS             complement(1261487..1262869)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260056"
FT                   /product="putative glycolate oxidase subunit D"
FT                   /note="C1336_000260056 identified by Glimmer3 with a raw
FT                   score of 15.97. Gene function extrapolated from C8J_1156
FT                   (CP000814.1) after blastn alignment (98.19 percent identity
FT                   over a 1383 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30646.1"
FT                   /translation="MKKEFEQYFKRFLGEENAYFDEIHKRAYSYDATKKHYLPDGVLFP
FT                   RNEEDIAQILKFCNENNIIVIPRGSGSGFTGGALAVNGGVVLAFEKHMNKILEIDLENL
FT                   VAVVQPGVINIHLQKEVAKYGLFYPPDPASMEYSSLGGNVSENAGGMRAAKYGITKDYV
FT                   MALRAVLPSGEIIRAGKRTIKDVAGYNLAGILIASEGSLAVLSELTLKLMPLPKFKKTA
FT                   FAIFPSVKSAMNAVYKSLASGVSPVSMEFLDNLSIRAVESKFNKGLPIEAGAILIADVD
FT                   GNVKEAIDEDLRNLEHYFLEAGASEFKIAKDEQEAADIWFARRNCSQSIAMYGTLKLNE
FT                   DITVPRSKLPALLEGIDEISKRYGFKIPCFGHTGDGNVHTNVMVPDKNDQEQVKKGYEA
FT                   VEEIFKLTVKLGGTLSGEHGIGLSKAPFMNLAFSEAEMNLMRNIKKAFDPNNILNPFKM
FT                   GL"
FT   gene            complement(1262872..1263597)
FT                   /locus_tag="C1336_000260057"
FT                   /note="C1336_000260057 identified by Glimmer3 with a raw
FT                   score of 11.65."
FT   CDS             complement(1262872..1263597)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260057"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260057 identified by Glimmer3 with a raw
FT                   score of 11.65. Gene function extrapolated from C8J_1157
FT                   (CP000814.1) after blastn alignment (99.86 percent identity
FT                   over a 726 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30647.1"
FT                   /translation="MFKTIVCFLALNLSLFAVGFDLKPIKSELVKVDDIYGYIKDSDDI
FT                   KLYSSGVVVQHFSNSQSIIARASVIDKKNGLAKLEFSVFSALKQDALPLPNVLPKVGDE
FT                   VVLNFLYDRGLVIAPDEQTYNELVREFPQIYFTHIDIFGAQLIRTATLSPKRSDFRQFC
FT                   DDNAVGILVVALENQAEVVDCQDFNKLYEVPISKPTSVQVPFYSRIGGYKSNFFDFNSQ
FT                   EIGNYYRYYDALINLPKVQ"
FT   gene            1263719..1264879
FT                   /locus_tag="C1336_000260058"
FT                   /note="C1336_000260058 identified by Glimmer3 with a raw
FT                   score of 11.31."
FT   CDS             1263719..1264879
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260058"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000260058 identified by Glimmer3 with a raw
FT                   score of 11.31. Gene function extrapolated from C8J_1158
FT                   (CP000814.1) after blastn alignment (99.66 percent identity
FT                   over a 1161 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30648.1"
FT                   /translation="MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSLY
FT                   YGLDREDQELASDIAYKIKYQVLKDENNNIEQVLIPISDDLQIHIYKDKDGQYTLAFTP
FT                   VSYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTLYYE
FT                   QKRRMGKLWGDINIKMAMVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYTRISS
FT                   PFTTARYHPILKRYRAHLGIDYAAPTGTPVKSAGKGVVTFIGTKGGYGNVIQIKHDSGY
FT                   MTLYAHLSRFAKIKNGQKVNQGQVIAYVGSTGMSTGPHLHFGVYLNNKAINPASVVKIA
FT                   KSELSGKAKENFKHIIAGYEQVVKEALASNQPNPPKEEDFENYIEF"
FT   gene            complement(1264876..1265079)
FT                   /locus_tag="C1336_000260059"
FT                   /note="C1336_000260059 identified by Glimmer3 with a raw
FT                   score of 14.94."
FT   CDS             complement(1264876..1265079)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260059"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260059 identified by Glimmer3 with a raw
FT                   score of 14.94. Gene function extrapolated from C8J_1159
FT                   (CP000814.1) after blastn alignment (98.53 percent identity
FT                   over a 204 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30649.1"
FT                   /translation="MYERKDLRVLKIIQKAREFGDGDLLNEALVKQLIDADFCEINEKE
FT                   KEELATLLNSLINAKDKALLSN"
FT   gene            complement(1265081..1265761)
FT                   /locus_tag="C1336_000260060"
FT                   /note="C1336_000260060 identified by Glimmer3 with a raw
FT                   score of 12.18."
FT   CDS             complement(1265081..1265761)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260060"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260060 identified by Glimmer3 with a raw
FT                   score of 12.18. Gene function extrapolated from Cj1217c
FT                   (AL111168.1) after blastn alignment (97.65 percent identity
FT                   over a 681 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein Cj1217c' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30650.1"
FT                   /translation="MGRSGKNFLSLLENDKVGIFCAFDKDYNVFRAKIHNENLFSHLGF
FT                   KDIEKCVFMDQIHSHKVIIYDKNLKNLSCDGIISKEKNTALCVLSADCLPLILYHESGI
FT                   IAALHSGRKGSFENILKECVDQIAMQNSHLDKNKFHLFILPGICAKNYEIDGEILEFAK
FT                   KEFKEFVQDDKLDLKALVKFQAQNLGIENIKDCGICSFDDESFFSYRRDKTTKRFVSVV
FT                   YLKD"
FT   gene            complement(1265725..1266336)
FT                   /locus_tag="C1336_000260061"
FT                   /note="C1336_000260061 identified by Glimmer3 with a raw
FT                   score of 12.91."
FT   CDS             complement(1265725..1266336)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260061"
FT                   /product="riboflavin synthase, alpha subunit"
FT                   /note="C1336_000260061 identified by Glimmer3 with a raw
FT                   score of 12.91. Gene function extrapolated from
FT                   CJJ81176_1231 (CP000538.1) after blastn alignment (97.39
FT                   percent identity over a 612 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30651.1"
FT                   /translation="MFNGLIREIAKVQSYQNNTLSLKAKYRPNLGDSIAVNGACLSVTK
FT                   LYEGGFEVELSRESRTHIAIENLKDKVHIEPALRYGDRIDGHLMQGHIDFIGTLEKIQK
FT                   DENGVDFYISLPKEAMKFMAEKGSIGVDGVSLTINEILKNGIRLTIIPITFKETLFKDY
FT                   QVGRKINIESDLLARYIYAQLQGKNKGLSWEEVERISYLY"
FT   gene            complement(1266346..1268887)
FT                   /locus_tag="C1336_000260152"
FT                   /note="Features C1336_000260062, C1336_000260063 joined to
FT                   form C1336_000260152 to correct 454 sequencing error
FT                   (C1336_000260062 identified by Glimmer3 with a raw score of
FT                   11.53, C1336_000260063 identified by Glimmer3 with a raw
FT                   score of 12.29)."
FT   CDS             complement(join(1266346..1267746,1267748..1268887))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260152"
FT                   /product="hypothetical protein"
FT                   /note="Features C1336_000260062, C1336_000260063 joined to
FT                   form C1336_000260152 to correct 454 sequencing error
FT                   (C1336_000260062 identified by Glimmer3 with a raw score of
FT                   11.53, C1336_000260063 identified by Glimmer3 with a raw
FT                   score of 12.29). Gene function extrapolated from
FT                   CJJ81176_1232 (CP000538.1) after blastn alignment (97.55
FT                   percent identity over a 816 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30652.1"
FT                   /translation="MKKIFYGVIAFVVVLLIAIYAILFTSFGNNIVANIAQKKIKESAG
FT                   LDVNITHFNLRFSSLELQANIANMADFNLKGALSPFKLGFDLDYLISLNQNYAKNLGLN
FT                   LNQNLSFGGKIQGKASDFTLDGKGYLLGSNVLLNGRMYNYSPIALNLDAQNLKIEEILH
FT                   LLSYPSYAKGFLNAQAKISAQDLKPDGNIIIKLDTSYINYEAIKKDFSLDLPLNSNPKA
FT                   EILANVKEDKIYAVSKIYNDYFNLQTQKTLYDISKNALSTDFNLSIPSLAKLEKLTKTR
FT                   LNGSLGVIGQTSVVNNILSSLNAQVIGLGGEVKASLKNNKLFADINEASLEKLLALAGY
FT                   GALVSGNLNAKLLNADLDFSNFDLEAKINNAKINTNELKKIAKIELPNTIFSLDTKANA
FT                   KNSNISYNALLASNLLNIKKLQGTYNLKNSELNTDLNAFIDDLSQFSAIAGQKLQGKAD
FT                   LTAKAHIIGTQIQNLNANANLADGVIKVDSNGKKLDLNIDKLDLSKLFVIAGMPNYASG
FT                   IVNAKVNLDNIDFNNLNGKANLEAKGILNAATLSKILNKNFPNNTSYDLNTKINFKNNI
FT                   AQFDSVLNSSLADLTKLQGSFDISKMLLNSDFNLKINDFSKLGFLLDRKLKGRAEFNGK
FT                   VGFDKNLNFVVNSPNLFEGKLQSTLKDNLLLADLNGVDLSSLAQGLDFMDVYQGKADVK
FT                   ANYNLLSEEGEVNLDMKEGKLKPNLITNALKILTLKDITNDVYRTVNAKALIKKENIKL
FT                   DLNMQADRSYILVQSGVLNSKSGALNLPFDIKLDRANFKGSITGTTENPKVNLNAGSVL
FT                   NSIKNVVGGGVSDGAKSTGDKVDKAVNKLLNKIF"
FT                   /artificial_location="low-quality sequence region"
FT   gene            1269049..1269309
FT                   /locus_tag="C1336_000260064"
FT                   /note="C1336_000260064 identified by Glimmer3 with a raw
FT                   score of 12.05."
FT   CDS             1269049..1269309
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260064"
FT                   /product="cpn10; 10 kDa chaperonin"
FT                   /note="C1336_000260064 identified by Glimmer3 with a raw
FT                   score of 12.05. Gene function extrapolated from C8J_1163
FT                   (CP000814.1) after blastn alignment (97.70 percent identity
FT                   over a 261 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30653.1"
FT                   /translation="MNFQPLGKRVLVKRVEETKTTASGIIIPDNAKEKPLMGEVVAVSK
FT                   EITDIANGDKIVFAKYGGTEIKLDNNEYLVLNLDDILGILK"
FT   gene            1269331..1270968
FT                   /locus_tag="C1336_000260065"
FT                   /note="C1336_000260065 identified by Glimmer3 with a raw
FT                   score of 14.69."
FT   CDS             1269331..1270968
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260065"
FT                   /product="co-chaperonin GroEL"
FT                   /note="C1336_000260065 identified by Glimmer3 with a raw
FT                   score of 14.69. Gene function extrapolated from C8J_1164
FT                   (CP000814.1) after blastn alignment (97.74 percent identity
FT                   over a 1638 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30654.1"
FT                   /translation="MAKEIIFSDEARNKLYEGVKKLNDAVKVTMGPRGRNVLIQKSFGA
FT                   PSITKDGVSVAKEVELKDSLENMGASLVREVASKTADQAGDGTTTATVLAHAIFKEGLR
FT                   NITAGANPIEVKRGMDKACEAIVGELKKLSREVKDKKEIAQVATISANSDEKIGNLIAD
FT                   AMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMTVELSSPYILLF
FT                   DKKIANLKDLLPVLEQIQKTGKPLLIIAEDIEGEALATLVVNKLRGVLNISAVKAPGFG
FT                   DRRKAMLEDIAILTGGEVISEELGRTLESATIQDLGQASSVIIDKDNTTIVNGAGEKAN
FT                   IDARVNQIKAQIAETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDAL
FT                   SATKAAVEEGIVIGGGAALIKAKAKIKLDLQGDEAIGAAIVERALRAPLRQIAENAGFD
FT                   AGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEA
FT                   TISEIKEDKPAMPDMSGMGGMGGMGGMM"
FT   gene            complement(1271012..1272202)
FT                   /locus_tag="C1336_000260066"
FT                   /note="C1336_000260066 identified by Glimmer3 with a raw
FT                   score of 10.65."
FT   CDS             complement(1271012..1272202)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260066"
FT                   /product="sensor histidine kinase"
FT                   /note="C1336_000260066 identified by Glimmer3 with a raw
FT                   score of 10.65. Gene function extrapolated from
FT                   CJJ81176_1235 (CP000538.1) after blastn alignment (97.36
FT                   percent identity over a 1059 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30655.1"
FT                   /translation="MAKKVIRQILLIYLTTTGIFLTIFFALWYQKLYEELVVLKGATLR
FT                   ENHRNIVISILNSRFTPIDISAKNIAQSAALKFAIFDAKKIVFSNIDFDLRKAKIEFKG
FT                   RGICDNKVFFLAPMSADHYFLRHASNEEVNTNDGLQILIQGEDVGKDLFWIRTKVFGFA
FT                   VMAFCILGLISYILVKIALKPLEDKISTLNRFIKDSTHELNTPLSVILMSIEQLEHQNL
FT                   GDNAKFTRIKLAAKSLSQVYSDLVFYNFPNTLETEKQKFDLRMLLEERLEYFKVFFEQK
FT                   KITLKLDLNQANIFAPKNQISKLIDNLINNAIKYNKKGGVISIILKANFLSIADTGCGI
FT                   SKSNLNQIFDRYTRFNTDQGGFGIGLSLVKKICDDNDIKIICESVENQGSVFKLNW"
FT   gene            complement(1272195..1272860)
FT                   /locus_tag="C1336_000260067"
FT                   /note="C1336_000260067 identified by Glimmer3 with a raw
FT                   score of 14.83."
FT   CDS             complement(1272195..1272860)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260067"
FT                   /product="DNA-binding response regulator"
FT                   /note="C1336_000260067 identified by Glimmer3 with a raw
FT                   score of 14.83. Gene function extrapolated from
FT                   CJJ81176_1236 (CP000538.1) after blastn alignment (97.64
FT                   percent identity over a 594 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30656.1"
FT                   /translation="MAAKILLLEDDLSLSEIIEEFLNDEGYEVFLCDNAQEALDIAYER
FT                   YFDLWILDVKVPLGDGFSLLKELRKSGKQTPAIFMTSLNTTNDLKQGFDAGCDDYIKKP
FT                   FELTELSIRVKALLKRAFSHKNEDFEDLGDGFRFEFTTQILYYNNKALTLPSKEIKLLS
FT                   LLLKNKNNFLSTERIFEELWDYDEEPSELSLRAYVKNLRKILGKEKIINQRGRGYCYG"
FT   gene            1273009..1273608
FT                   /locus_tag="C1336_000260068"
FT                   /note="C1336_000260068 identified by Glimmer3 with a raw
FT                   score of 10.83."
FT   CDS             1273009..1273608
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260068"
FT                   /product="non-heme iron protein, hemerythrin family"
FT                   /note="C1336_000260068 identified by Glimmer3 with a raw
FT                   score of 10.83. Gene function extrapolated from
FT                   CJJ81176_1237 (CP000538.1) after blastn alignment (96.83
FT                   percent identity over a 600 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30657.1"
FT                   /translation="MLPKWDNSYSVHNAKIDEQHKKLFELAAKVEVVSDRSVSKNEVKE
FT                   LLAEFFNYMKDHFNDEEKYMQLIGYPNLEEHRKIHKEIIQTMINLIKDIKSTNDLKEKL
FT                   YIVAKKWLLEHILYEDMKVEKWRSSSLSTDDGSDISFEAAEDEDNEHPQFYLYICNCPG
FT                   KIHDVPYNIHQKIELQGHKFTCKTCKQIIKFYKKHS"
FT   gene            1273619..1273990
FT                   /locus_tag="C1336_000260069"
FT                   /note="C1336_000260069 identified by Glimmer3 with a raw
FT                   score of 19.77."
FT   CDS             1273619..1273990
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260069"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260069 identified by Glimmer3 with a raw
FT                   score of 19.77. Gene function extrapolated from C8J_1168
FT                   (CP000814.1) after blastn alignment (97.15 percent identity
FT                   over a 316 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30658.1"
FT                   /translation="MKHNVKTYSFRMPLELKERLDNLSKNLSKPKSAIVKEAIEAYLNE
FT                   VEDFSFAVNALEELKDGDYQKASKKIDKIVKNLQEDSNDNELGDFDFAIEALEELKDGD
FT                   YQKASKKIDKIVKNLKETK"
FT   gene            complement(1274078..1274152)
FT                   /locus_tag="C1336_000260157"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(1274078..1274152)
FT                   /locus_tag="C1336_000260157"
FT                   /product="tRNA-Asn"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(1274245..1275492)
FT                   /locus_tag="C1336_000260070"
FT                   /note="C1336_000260070 identified by Glimmer3 with a raw
FT                   score of 10.79."
FT   CDS             complement(1274245..1275492)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260070"
FT                   /product="putative two-component sensor (histidine kinase)"
FT                   /note="C1336_000260070 identified by Glimmer3 with a raw
FT                   score of 10.79. Gene function extrapolated from Cj1226c
FT                   (AL111168.1) after blastn alignment (99.19 percent identity
FT                   over a 740 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30659.1"
FT                   /translation="MNKSSIFYTITFIFIFAGVSVILGFLWLIEYDQQNYTRELNTKYS
FT                   LIANARLLNFAGVISEKEFEEQTKNYNKMDEITEAKQIRKILFRGDVLARVEVNNGLIE
FT                   IISYNRQVYLNIIYDGKVYLYKDQDYQTYRYFIIKAIAVAMICILVLLYIYIFKKLKPL
FT                   KRLKKQIDKFAQGKLSDIEDVSTGVDEISQVSEAFYQAIVQIRKLNQSRQFFLRNIMHE
FT                   LKTPITKGLLTLEMIEDNKYKERLNGVFTRLEILINEFAAIEQITSGAAFINRKKYNIL
FT                   DVLDEAKEIAMRDDSNIRIFMEESFFVNVDFKLFTTAIKNMIDNGIKHSEDGFVQIDII
FT                   DDYICFKNRGPELNNTLEYYTQAFTQGSKQKSSFGLGLYIVNTILETHGMKLDYLYEDG
FT                   VNLFYFRNLKSIIVKE"
FT   gene            complement(1275489..1276163)
FT                   /locus_tag="C1336_000260071"
FT                   /note="C1336_000260071 identified by Glimmer3 with a raw
FT                   score of 12.74."
FT   CDS             complement(1275489..1276163)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260071"
FT                   /product="DNA-binding response regulator"
FT                   /note="C1336_000260071 identified by Glimmer3 with a raw
FT                   score of 12.74. Gene function extrapolated from
FT                   JJD26997_0498 (CP000768.1) after blastn alignment (98.96
FT                   percent identity over a 675 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30660.1"
FT                   /translation="MTNILMIEDDLELAEITAEYLEKFDMKVDIAHEPYIGLSKLALKE
FT                   YQLIILDLSLPGLDGLEVCEEIRKKYDTPIIISSARHDITDKVNALELGADDYLPKPYN
FT                   PKELQARIKSHLRRISNTKSAIAKSVKDLVYDQYKHIITMKGQELTLTNAEFDILSYLI
FT                   KKEGGVVSREELVYNCSSISEDSSNKSIDVIISRIRQKMGDDPKTPKYIHSIRGIGYKL
FT                   TQ"
FT   gene            complement(1276239..1277657)
FT                   /locus_tag="C1336_000260072"
FT                   /note="C1336_000260072 identified by Glimmer3 with a raw
FT                   score of 14.31."
FT   CDS             complement(1276239..1277657)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260072"
FT                   /product="protease DO"
FT                   /note="C1336_000260072 identified by Glimmer3 with a raw
FT                   score of 14.31. Gene function extrapolated from C8J_1171
FT                   (CP000814.1) after blastn alignment (98.35 percent identity
FT                   over a 1155 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30661.1"
FT                   /translation="MKKIFLSLSLASALFAASINFNESTTTANRVNPAAGNVVLSYHDS
FT                   IKDAKKSVVNISTSKTITRANRPSPLDDFFNDPYFKQFFDFDFPQRKGKNDKEVVSSLG
FT                   SGVIISKDGYIVTNNHVVDDADTITVNLPGSDTEYKAKLIGKDPKTDLAVIKIEANNLS
FT                   AITFTNSDDLMEGDVVFALGNPFGVGFSVTSGIISALNKDNIGLNQYENFIQTDASINP
FT                   GNSGGALVDSRGYLVGINSAILSRGGGNNGIGFAIPSNMVKDIAKKLIEKGKIDRGFLG
FT                   VTISALQGDTKKAYKNQEGALITDVQKGSSADEAGLKRGDLVTKVNDKVIKSPIDLKNY
FT                   IGTLEIGQKISLSYERDGENKQANFTLKGEKENPKGVQSDLIDGLSLRNLEPRLKDRLQ
FT                   IPKDVNGVLVDSVKEKSKGKNSGFQEGDIIIGVGQSEIRNLKDLEQALKQVNKKEFTKV
FT                   WVYRNGFATLLVLK"
FT   gene            1277857..1278750
FT                   /locus_tag="C1336_000260073"
FT                   /note="C1336_000260073 identified by Glimmer3 with a raw
FT                   score of 14.52."
FT   CDS             1277857..1278750
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260073"
FT                   /product="putative curved-DNA binding protein"
FT                   /note="C1336_000260073 identified by Glimmer3 with a raw
FT                   score of 14.52. Gene function extrapolated from C8J_1172
FT                   (CP000814.1) after blastn alignment (98.78 percent identity
FT                   over a 737 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30662.1"
FT                   /translation="MNSLYETLGVSKNASADEIKKAYRRLARKYHPDINKEKGAEEKFK
FT                   EINAAYEILSDEKKRAQYDQYGDSMFGGQSFHDFSKNTGGVNLDDILKDLFGGGFGGRS
FT                   RGGFNGFSSKGFSSGFGGFGGFEEENLDSNLELHIPFEKAVKGGEHSFNFQGETIKFKI
FT                   PHGIKEGEKLRIRSKGKQSRNGARGDLIIIVKIEESPIYTREDDDLYQKVDISLKTALF
FT                   GGKINIKTLKEGKEEATINITPNSKNNQKIRLKGYGVQNRKSDIYGDMYLILNVVLPNL
FT                   DALDEKFIELLKEKLP"
FT   gene            1278766..1279140
FT                   /locus_tag="C1336_000260074"
FT                   /note="C1336_000260074 identified by Glimmer3 with a raw
FT                   score of 10.82."
FT   CDS             1278766..1279140
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260074"
FT                   /product="transcriptional regulator, MerR family"
FT                   /note="C1336_000260074 identified by Glimmer3 with a raw
FT                   score of 10.82. Gene function extrapolated from
FT                   JJD26997_0495 (CP000768.1) after blastn alignment (98.67
FT                   percent identity over a 375 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30663.1"
FT                   /translation="MEHHYDEPVYLISVVAKVLSIHPQTLRQYEREGLIEPSRTDGKIR
FT                   LYSQRDIDRIKLILRLTRDMGINLAGVDVILKLKNQLHEFENLIDELRLELSKQQDKEA
FT                   ASKAVVKHKNSFDLIFYEKK"
FT   gene            1279147..1280772
FT                   /locus_tag="C1336_000260075"
FT                   /note="C1336_000260075 identified by Glimmer3 with a raw
FT                   score of 13.19."
FT   CDS             1279147..1280772
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260075"
FT                   /product="putative glutathione-regulated potassium-efflux
FT                   system protein"
FT                   /note="C1336_000260075 identified by Glimmer3 with a raw
FT                   score of 13.19. Gene function extrapolated from C8J_1174
FT                   (CP000814.1) after blastn alignment (99.24 percent identity
FT                   over a 526 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30664.1"
FT                   /translation="MDNFLEIFLITVAIAIILNVIFKKFEIPTIIGYIAAGEIISEIYH
FT                   LSGKGEITHIAEFGIVFLMFTIGLEFSFKHLMAMKQEVFLNGSLQMLTCGFVFMLLAIG
FT                   ILGLGDKSATIVGFALALSSTAVVLKILNDNGDINEQYGRKALGILLFQDIAVIPLLLL
FT                   VDIFSSNNQNIEKLLFTTLISALILITLLFFIGKYLVDRIFRLIIHTSSQEIFISTVLF
FT                   MVIGASFLANYFGFSYSLGAFIAGALIAETKYKHKIEADLIPFRDLLLGLFFITVGMQI
FT                   QLDVVAQNWFLIIVLTLLVMALKFGIVFGFLFLYTKKRVALKTAFAIAQIGEFALAIFS
FT                   LLQAKNMLDIKTSQILIVVSILTMIITPFILNNIRKITNVVEDIALNTNAVQNIDSNIK
FT                   LKNHLVVFGYGRLGQEVVQKIKNTGVPYLVLESDLNLVELGVSRGENVVFANAAQEETL
FT                   KIANIEECAVAIITVTNEAKLEILCQVLANYPKPIDTIIHVNGTLKKMLFSSIDENIRI
FT                   IRSEKVIARNLVQEALECRIHKNT"
FT   gene            1280782..1281114
FT                   /locus_tag="C1336_000260076"
FT                   /note="C1336_000260076 identified by Glimmer3 with a raw
FT                   score of 14.18."
FT   CDS             1280782..1281114
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260076"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260076 identified by Glimmer3 with a raw
FT                   score of 14.18. Gene function extrapolated from
FT                   JJD26997_0493 (CP000768.1) after blastn alignment (99.13
FT                   percent identity over a 115 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30665.1"
FT                   /translation="MTKNKEKALRVKYLRNLEKFFNGAISALKKEDFDKTKFEERMLKN
FT                   AKFFEKNPAVNLNSTYAKNLEFFVNACLDFSKEKSELLNLANALDRQKKQGEKKEKHKN
FT                   YLKDYE"
FT   gene            1281111..1281731
FT                   /locus_tag="C1336_000260077"
FT                   /note="C1336_000260077 identified by Glimmer3 with a raw
FT                   score of 14.80."
FT   CDS             1281111..1281731
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260077"
FT                   /product="HAD-superfamily hydrolase, subfamily IA, variant
FT                   1 family protein"
FT                   /note="C1336_000260077 identified by Glimmer3 with a raw
FT                   score of 14.80. Gene function extrapolated from
FT                   CJJ81176_1247 (CP000538.1) after blastn alignment (96.94
FT                   percent identity over a 621 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30666.1"
FT                   /translation="MINIFFDMDGTLIDSANAISYAVNEIRQDLNLAPLSREIIMQTIN
FT                   TPNIDWAKELYNIENFHHSSFKEGYEKYFVKHYEQSVVLFEGVKELLEFLKSKNCFLAI
FT                   ATNAPQSSLSSILKKHDIIPYFDKILGISLGIEPKPHPMMLELLKSEAPHKTSVFIGDS
FT                   QKDKECAKNANLPYFHAKWYQKDLKENEFSNASELKGFLEKYL"
FT   gene            1281787..1283781
FT                   /locus_tag="C1336_000260078"
FT                   /note="C1336_000260078 identified by Glimmer3 with a raw
FT                   score of 15.64."
FT   CDS             1281787..1283781
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260078"
FT                   /product="glycyl-tRNA synthetase, beta subunit"
FT                   /note="C1336_000260078 identified by Glimmer3 with a raw
FT                   score of 15.64. Gene function extrapolated from
FT                   CJJ81176_1248 (CP000538.1) after blastn alignment (98.37
FT                   percent identity over a 1288 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30667.1"
FT                   /translation="MSELLIEIGTEELPAIPLLKELANIEKKWKNILEEYRMVSDFKFY
FT                   YTPRRLVFFHENFADKQEDSFAEFIGAPKNVAYKDGVLTPAGQSFLQKAGISENELAFK
FT                   EIKGKEVLYHQKAIKGLQSQKILGEMVEKFLKSLSFGKSMRWGANSFEFIRAIRSIACI
FT                   LNDELVDFQSYGVKSAKKTFIHRSVSYDLKDFNNAKEYFELLEKNYIILDPIKRKEKIL
FT                   EQFKLIESQKNIQIGEDEELLAEVVAITEYPNALLGSFEEEFLEIPSEVIITSMRENQR
FT                   YFAVFNDKGLSNHFIVVSNAVCKDYSKIIHGNERVLRARLSDAMFFYQNDLQNGLQPEK
FT                   LAKMTYLEGLGTMQDKSLREIKIAEILCQMLHNDKIENISTALKYAKADLATQMVYEFT
FT                   DLQGIMGSYYAQKMGLDYEICLAIKEQYLPNSEQAPLPSTEFSSIVALANKLDTLIGLF
FT                   SIGKIPSGTKDPYALRRAANGIIKIALNLNKEFDIQILLEKLSSHYKSFDMQILKDFIF
FT                   ERLYTFYTVNASFVKAVLSSQNTDLIHINQSVNALIKLSKKDNFNENFATFKRLANIAT
FT                   KNPHKVDESLFTQEAESKLYKAFQEKTKANSLQEKLENLFALKPFIDEFFNQVMINAED
FT                   EKLKNNRQALVYEIYAEFLKIADLKELSL"
FT   gene            1283778..1284599
FT                   /locus_tag="C1336_000260079"
FT                   /note="C1336_000260079 identified by Glimmer3 with a raw
FT                   score of 15.10."
FT   CDS             1283778..1284599
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260079"
FT                   /product="peptidase, M23/M37 family"
FT                   /note="C1336_000260079 identified by Glimmer3 with a raw
FT                   score of 15.10. Gene function extrapolated from CJE1370
FT                   (CP000025.1) after blastn alignment (99.15 percent identity
FT                   over a 118 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30668.1"
FT                   /translation="MKALWLFLSLTLWLFGAQNLELIKGQALFLELNKKDFLSLKNNDK
FT                   NILTFAHPKNQEKILAIFSLPYKNPPKNTKLIAFYKNKKEEIFIKTLEGNYKSEKLQVE
FT                   NKKIFPPKTVQERIAKELKEANAIYSSYTPKALFNGAFNIPLKSFITSDFGKARTFNEK
FT                   VASYHSGTDFRAATGTPIYAANSGIVKIAKDRYFAGNSVVIDHGFGIYSQYYHLSKIDV
FT                   KVGQKIKKGELIGLSGASGRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ"
FT   gene            1284596..1285546
FT                   /locus_tag="C1336_000260080"
FT                   /note="C1336_000260080 identified by Glimmer3 with a raw
FT                   score of 13.23."
FT   CDS             1284596..1285546
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260080"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260080 identified by Glimmer3 with a raw
FT                   score of 13.23. Gene function extrapolated from C8J_1179
FT                   (CP000814.1) after blastn alignment (99.27 percent identity
FT                   over a 137 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30669.1"
FT                   /translation="MKFSDFFHAWLHKSYYKNAVSIGKNGDFFTAVSVGNLFGTLLAKH
FT                   FLNLIDKKILQPPLELVEIGANEGYLSRDFLAALLELRPEIFSQISFFIIEPHEKLKNL
FT                   QKKTLEGVEFTHKNSLKECHFKNAFFFCNELFDSFTCELIDHDKMAFVENFKLIFKNMD
FT                   ENLITKCKTLNLTKGELSLELENFFKDLDQACERFIFAGFDYGTFNVQNFSLRIYQKHE
FT                   VFNPFEAPLKDFFGKSDLTYNVNFTHLQKLIKAYDFKPLAFKKQSLALMDFGFEDLLEY
FT                   TKNKNIKTYESFLSQAKILFFNFDEKFHFFEFQKN"
FT   gene            complement(1285543..1286517)
FT                   /locus_tag="C1336_000260081"
FT                   /note="C1336_000260081 identified by Glimmer3 with a raw
FT                   score of 15.77."
FT   CDS             complement(1285543..1286517)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260081"
FT                   /product="phosphatase, Ppx/GppA family"
FT                   /note="C1336_000260081 identified by Glimmer3 with a raw
FT                   score of 15.77. Gene function extrapolated from
FT                   CJJ81176_1251 (CP000538.1) after blastn alignment (98.52
FT                   percent identity over a 406 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30670.1"
FT                   /translation="MLGIDLGSNTLRAVQMDEKLNKLKEYEFVIGAAKNLNQSGEISKE
FT                   AIQRLKNTLSILAKEQDLSKARAVATAAFRKASNTNEIFAYLKEEFGIDFKLIDAKSEA
FT                   KISVLGMQSGLRRLKIWGEFAYCDLGGASCELSFRKSFKSFDFGIISFYEKNCHSYYKS
FT                   CISYKKLIKKYPKFIINIKDKKLKIHFLIANPYLKHLAFMAFDEVAMIKKELRSLGAKA
FT                   VVLNSGVPTTLSALKQNISYEKYETTRVNGKKLCHKDFLNYAIKLFHMEEKKAIKEVGM
FT                   MRKNYLSAGCLLFYALFDKHKLLVIDEGLREGVCLASMKNIKF"
FT   gene            1286574..1287347
FT                   /locus_tag="C1336_000260082"
FT                   /note="C1336_000260082 identified by Glimmer3 with a raw
FT                   score of 16.29."
FT   CDS             1286574..1287347
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260082"
FT                   /product="pyridoxal phosphate biosynthetic protein PdxJ"
FT                   /note="C1336_000260082 identified by Glimmer3 with a raw
FT                   score of 16.29. Gene function extrapolated from
FT                   CJJ81176_1252 (CP000538.1) after blastn alignment (97.16
FT                   percent identity over a 774 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30671.1"
FT                   /translation="MLLGVNIDHIAVLRQARMVNDPDLLEAAFIAAKHGDQITLHVRED
FT                   RRHAQDFDLENIIKFCKSPINLECALNDEILNLALKLKPHRVTLVPEKREELTTEGGLC
FT                   LNHAKLKQSIEKLQSANIEVSLFINPSLEDIEKSKILKAQFIELHTGHYANLHNALFSN
FT                   ISHTAFALKELDQDKKTLQAHFEKELQNLTLCAKKGTEFGLKVAAGHGLNYKNVKPITK
FT                   IKEICELNIGQSIVARSVFTGLQNAILEMKELIKR"
FT   gene            1287344..1288438
FT                   /locus_tag="C1336_000260083"
FT                   /note="C1336_000260083 identified by Glimmer3 with a raw
FT                   score of 16.15."
FT   CDS             1287344..1288438
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260083"
FT                   /product="4-hydroxythreonine-4-phosphate dehydrogenase"
FT                   /note="C1336_000260083 identified by Glimmer3 with a raw
FT                   score of 16.15. Gene function extrapolated from CJE1374
FT                   (CP000025.1) after blastn alignment (97.60 percent identity
FT                   over a 125 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30672.1"
FT                   /translation="MKKLAISIGDINGIGLEILVRSHEELSKICTPFYFIHESLLDKAL
FT                   KLLNLKPFNVKIVAFKDKKDYEFKFLKKQNSLEIYSFCLPLGFKVDENFEIKAGEIDAK
FT                   SGLYGFLSFKAASYFVYEKHAHALLTLPIHKKAWGDAGLKYKGHTDALRDFFKKNAIMM
FT                   LGCKELFVGLFSEHVPLAKVSKKITFKNLSIFLKDFYKETHFKKIGLLGFNPHAGDYGV
FT                   IGGEEEKIMEKSITFVNAFLRSKKDEKFFKKALKDENLQKELLLSFKDKGVYLPYPLVA
FT                   DTAFTKAGLKNCNRLVAMYHDLALAPLKALYFDKSINVSLNLPIIRVSVDHGTAFDKAY
FT                   KNAKINTKSYFEAAKFAINLNPKA"
FT   gene            complement(1288592..1288747)
FT                   /locus_tag="C1336_000260084"
FT                   /note="C1336_000260084 identified by Glimmer3 with a raw
FT                   score of 14.86."
FT   CDS             complement(1288592..1288747)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260084"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260084 identified by Glimmer3 with a raw
FT                   score of 14.86. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30673.1"
FT                   /translation="MKKYFKAISKKMVKERKICIKNMQNTKAGENPILPLLNASDCMQE
FT                   AYAKSK"
FT   gene            complement(1288846..1288998)
FT                   /locus_tag="C1336_000260085"
FT                   /note="C1336_000260085 identified by Glimmer3 with a raw
FT                   score of 18.58."
FT   CDS             complement(1288846..1288998)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260085"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260085 identified by Glimmer3 with a raw
FT                   score of 18.58. Gene function extrapolated from CJE1376
FT                   (CP000025.1) after blastn alignment (97.18 percent identity
FT                   over a 142 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30674.1"
FT                   /translation="MKKIILLLGLSLMSLGALSFDELIYKDEVKPSFDCSKIKDDGKSD
FT                   DELMI"
FT   gene            1289061..1290260
FT                   /locus_tag="C1336_000260086"
FT                   /note="C1336_000260086 identified by Glimmer3 with a raw
FT                   score of 13.00."
FT   CDS             1289061..1290260
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260086"
FT                   /product="transporter, putative"
FT                   /note="C1336_000260086 identified by Glimmer3 with a raw
FT                   score of 13.00. Gene function extrapolated from
FT                   CJJ81176_1256 (CP000538.1) after blastn alignment (98.03
FT                   percent identity over a 558 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30675.1"
FT                   /translation="MQNYKKALFALALSAFCMGVTEFVMAGVLVDVEAYFSVDAKTAGY
FT                   LTTLYAIGVVIGAPLITIPLSRFHRHTQLLINLGIFALANFIIFFSQNFYLTAFARFVA
FT                   GTQHGVFFVIATLAVSAITPDDKKSSALAIMVTGLTVALVTGVPLGTFIGHYFGFKFIF
FT                   LLIFIITSLAFFGVWHMMPKNLHPSPTSLKNLIPAFSHQNLLKTYTITICSCGAQFVLY
FT                   TYLQKLLVEISSFKVQDTAYILLLYGICAICGNLWGGKIVDKKGAIFSLRLILSIQVLV
FT                   FLSVFLTMHSKILIIFSVALIGFFAFSTIPALKMLSIAKAKRHTYKVIDSTVSVNEAAF
FT                   NVGIALASFLGGIVLAGLGIEFNALFSALFVSPALIFALLFAKDKLNYKKFQRKSLKKI
FT                   "
FT   gene            1290316..1290636
FT                   /locus_tag="C1336_000260087"
FT                   /note="C1336_000260087 identified by Glimmer3 with a raw
FT                   score of 12.12."
FT   CDS             1290316..1290636
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260087"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260087 identified by Glimmer3 with a raw
FT                   score of 12.12. Gene function extrapolated from C8J_1185
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 110 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30676.1"
FT                   /translation="MVVDNTQKTSNAIFSTTTKVKEKNTSADEFQATLNEVKNKEEKEE
FT                   EKTSSSKFTNEDIDLGVVREDFRSYAWQKMREDQYKKNEETLLNKLFATIDAGNATNNT
FT                   KA"
FT   gene            1290820..1291842
FT                   /locus_tag="C1336_000260088"
FT                   /note="C1336_000260088 identified by Glimmer3 with a raw
FT                   score of 12.26."
FT   CDS             1290820..1291842
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260088"
FT                   /product="uroporphyrinogen decarboxylase"
FT                   /note="C1336_000260088 identified by Glimmer3 with a raw
FT                   score of 12.26. Gene function extrapolated from C8J_1186
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 99 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30677.1"
FT                   /translation="MIFIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLCK
FT                   DYKKASEVSLQPIDILDVDAAIIFSDILVVPLEMGMNLHFEKGEGPVFDNPISTLEDLE
FT                   KLDDQNAHKKLNYVYDALKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKK
FT                   MLYQNPELLHKILNKLTQVLKLYLEEQIKAGANAVQIFDSWASALEYDKFFEFSFNYML
FT                   EISNFIKSKYSNIPVILFPKGISGYLDRIDGNFDVFGVDWSTPLDLARDKLSHKYTLQG
FT                   NMEPCRLYDKNAIKEGVEKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLVQESSAK
FT                   "
FT   gene            1291839..1292741
FT                   /locus_tag="C1336_000260089"
FT                   /note="C1336_000260089 identified by Glimmer3 with a raw
FT                   score of 13.12."
FT   CDS             1291839..1292741
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260089"
FT                   /product="radical SAM domain protein"
FT                   /note="C1336_000260089 identified by Glimmer3 with a raw
FT                   score of 13.12. Gene function extrapolated from
FT                   JJD26997_0482 (CP000768.1) after blastn alignment (98.39
FT                   percent identity over a 434 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30678.1"
FT                   /translation="MKILFGPVSSRRFGRSLGIDLSPSKKQCNFDCVYCELDPKKAQEK
FT                   QDEIISIDKIISEVKAMLEKNVEFDFLTLTANGEPSLYPHLNELILSLRSIAKDKKLLI
FT                   LSNGTAVLDEDKFNALLKLNVVKFSLDSAVAKTFYRIDRALKNIDLEKMIEKMADFRAR
FT                   FNGDLIMEILVVKDLNDNEEEFKALNQALKKIMPLRVDLSTIDRPPAYAVKKVSEEKLL
FT                   ELSKLIDSTPVLLAKRHYEGEKLSFNEEELLKMLHLRSQSEIDIEVKFDEQSKTLLNQL
FT                   IKEKKVKILDLAGVKFYKV"
FT   gene            complement(1292738..1293934)
FT                   /locus_tag="C1336_000260090"
FT                   /note="C1336_000260090 identified by Glimmer3 with a raw
FT                   score of 11.09."
FT   CDS             complement(1292738..1293934)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260090"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260090 identified by Glimmer3 with a raw
FT                   score of 11.09. Gene function extrapolated from C8J_1188
FT                   (CP000814.1) after blastn alignment (98.14 percent identity
FT                   over a 967 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30679.1"
FT                   /translation="MILAGIIFIFNLILAYLSIDILKLDSVTEQLKIGMFSSIFVLSLT
FT                   LFIFAFRQNRNINKIYQKIFCMQNDFLNFQKKIDVDSALDLLKEKFETTGQNLTKISHE
FT                   KDRYLHLLEENLYQLGNISNAMRCLNEGYNKEINSLILNALNSQKDQIRLELNEALEHH
FT                   KSIIGTSHGKVLQFEASVAIVNNDELENFLLANLLSYFGIESTCFKNLSFDVNDFHLIF
FT                   IKDKILNENVKKNYDFIVMGRHKNTHYEYFLTSPFEKKDLENILQNKLDKVCTLKFKTP
FT                   YQNNVLLFKQNDFDATLFFNIIEKQCDKNVCINSFSQLKQELSKETYRLILLDYELIKF
FT                   DLEQMRNLLSAYKKKHPQSHIIFFSKEKVRDFDCVSEVLSDVSRNDLITLLRKYLPKA"
FT   gene            complement(1293936..1295738)
FT                   /locus_tag="C1336_000260091"
FT                   /note="C1336_000260091 identified by Glimmer3 with a raw
FT                   score of 14.70."
FT   CDS             complement(1293936..1295738)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260091"
FT                   /product="excinuclease ABC subunit C"
FT                   /note="C1336_000260091 identified by Glimmer3 with a raw
FT                   score of 14.70. Gene function extrapolated from C8J_1189
FT                   (CP000814.1) after blastn alignment (96.78 percent identity
FT                   over a 1803 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30680.1"
FT                   /translation="MTKENLENELKTLPNSAGVYQYFNQEGKLLYVGKAKNLKNRIKSY
FT                   FAFTPNLHANPRNSLRIQKMIEETVHLEFITTNSEADALILENSFIKQLHPKYNILLRD
FT                   DKTYPYIYVNFEEEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYPLKQKASC
FT                   KSPCIFYQISRCLAPCDKRISREKYLEILDEAMHALLNPSILIKNLEKQMLVLAQNENY
FT                   EEAAKVRDQIATIKDLEVRVEIDIAKLEDFEVFALAFENSMLSTLRFVVQNGKIISANS
FT                   KITPIKNDIQWDKNEIYKQLILENFSMDIPLLANVIYVYEEFEDRVLLEEILSQRFDKK
FT                   ISIKIPKIGEKRRICDLAFQNAFLNIEKEQKNHGFTIQKELKSYFELENLPNDIEIFDN
FT                   SHLQGVANVGAMVNYSANSWDKSKYRKFHLKHKNDYDQMREVLMRRALDFDKNPPPDLW
FT                   LIDGGKTLLDLAKEIIVSSGANVDILAISKEKIDAKAHRAKGGAKDKIHSLKGEFSLSI
FT                   NDKKLQFLQKLRDEAHRFAISFHQNTKKKQDLKSSKLANLGLSSGVIQKLLAYYGNFES
FT                   IYKADFKDLAMLVGKKAAQKIKEN"
FT   gene            complement(1295731..1296201)
FT                   /locus_tag="C1336_000260092"
FT                   /note="C1336_000260092 identified by Glimmer3 with a raw
FT                   score of 11.85."
FT   CDS             complement(1295731..1296201)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260092"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260092 identified by Glimmer3 with a raw
FT                   score of 11.85. Gene function extrapolated from
FT                   CJJ81176_1262 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 114 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30681.1"
FT                   /translation="MTKNASAVINELMDKPHYKPLKTLFFCKDFLSSFPLAKQRLIAKI
FT                   YVKNHILNIITLHPAAYQELNHDDSKIYIKFLIKAYGQKYPLSGFVDIKDIKIFSQKYT
FT                   YAVNKNKNDEKLSKNSYLELSKGEFKNCFKDEKLFKKFEDLRELIKKGSNLD"
FT   gene            1296229..1296360
FT                   /locus_tag="C1336_000260093"
FT                   /note="C1336_000260093 identified by Glimmer3 with a raw
FT                   score of 0.44."
FT   CDS             1296229..1296360
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260093"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260093 identified by Glimmer3 with a raw
FT                   score of 0.44. Gene function extrapolated from
FT                   JJD26997_0478 (CP000768.1) after blastn alignment (100.00
FT                   percent identity over a 132 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30682.1"
FT                   /translation="MILAFLFLIFFCACGYKGNPQYTSYEQNGSVKTIKKYEQLHRW"
FT   gene            1296364..1297899
FT                   /locus_tag="C1336_000260094"
FT                   /note="C1336_000260094 identified by Glimmer3 with a raw
FT                   score of 15.66."
FT   CDS             1296364..1297899
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260094"
FT                   /product="GMP synthase (glutamine-hydrolyzing)"
FT                   /note="C1336_000260094 identified by Glimmer3 with a raw
FT                   score of 15.66. Gene function extrapolated from Cj1248
FT                   (AL111168.1) after blastn alignment (97.51 percent identity
FT                   over a 642 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30683.1"
FT                   /translation="MKKADILVLDFGSQYTQLIARRLREQGVYAEILPFNVSLADIKAK
FT                   EPKGIILSGGPASVYATDAYFCDKGIFDLGLPILGICYGMQLMAHHYKATVAPAGHKEY
FT                   GKANIEVKKDSALFKNLPKKQTVWMSHSDKVENLPQGFEVLATSENSPFCVFGNEDKKF
FT                   FALQFHPEVQHSEFGKNILKNFAKYACNCESVWNMGSFAKTQAEKIREEVGSDKVLCAV
FT                   SGGVDSSVVAALLASAIKEQVIVVFVDNGLLRSGEKEQVEFMFKNTLGIDLISIDASEI
FT                   FLSRLANVRDPEQKRKIIGNTFIEVFEEEAKKHKDVKYLAQGTLYTDIIESSVIGVSKT
FT                   IKSHHNVGGLPEKMNLKLIEPLKEIFKDEVRALGLELGLSKEVVYRHPFPGPGLAIRIM
FT                   GEVNRASLELLRKADVILLEELKSTGWYDKTWQAFCVLLNVKSVGVMGDNRTYDNAVCI
FT                   RVVDASDGMTATFSHLPYEVLENISRRIINEVEGINRVVYDISSKPPATIEWE"
FT   gene            1297985..1299445
FT                   /locus_tag="C1336_000260095"
FT                   /note="C1336_000260095 identified by Glimmer3 with a raw
FT                   score of 8.97."
FT   CDS             1297985..1299445
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260095"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260095 identified by Glimmer3 with a raw
FT                   score of 8.97. Gene function extrapolated from
FT                   JJD26997_0476 (CP000768.1) after blastn alignment (99.59
FT                   percent identity over a 243 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30684.1"
FT                   /translation="MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGMLV
FT                   EFRTLSSEKKAEDGKPVQTSKTITGIKPSKFQEFKEGDFITEHDFWKTDNDDELEDLQN
FT                   SRRSAYITELYRTTDFDSIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEIPCI
FT                   LDYLILKRFLFKAYDTLVFMDNSIDQTQFSALKSIMMHLENSYKQMIADQKPNITKIFN
FT                   ETFLSLQCHYQALVATIDTRKNRLASLEAQMKTLQSEINLKSNAANADPEKLKARQERL
FT                   AKLQKEAEYYRTTLKRLDAIREDFYKKNYNIFENAFKLSREKLFKKIVTGLNLCATIMD
FT                   VKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDQKLLVYIQKI
FT                   TKEQRKKFLVVTSDLDLLCKLKIENFSQNPYYLVKYAPKKVNYQSLMRDNTFDIVYIDE
FT                   KHVWENVADIILQGKHFDKSGKTKFKLI"
FT   gene            1299685..1300935
FT                   /locus_tag="C1336_000260096"
FT                   /note="C1336_000260096 identified by Glimmer3 with a raw
FT                   score of 15.86."
FT   CDS             1299685..1300935
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260096"
FT                   /product="phosphoribosylamine--glycine ligase"
FT                   /note="C1336_000260096 identified by Glimmer3 with a raw
FT                   score of 15.86. Gene function extrapolated from
FT                   CJJ81176_1266 (CP000538.1) after blastn alignment (99.38
FT                   percent identity over a 324 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30685.1"
FT                   /translation="MKIMILGSGAREYSIALALRRVDKNLEFYFAPGNGATESLGTNLN
FT                   LKDPVVLATYAKEKGFDLCIVGSESFLAEGVVDIFKQQGLAIFGPSKAAAMLETSKSFM
FT                   KSFLKKYRIKTAKFLNTNDIEKAKNFIHSLTPPIVVKADGLCAGKGVIIAKTHEEAIEE
FT                   TAKMLSGESFGDAGKLVVIEEFLDGYELSIFAVCDGNDFVLLPVAQDHKKLLDNDQGPN
FT                   TGGMGAYAPSSLANESLLRKVQKDIILPTLAGMKKEGAEFCGVLFIGAMIVGNKPYVLE
FT                   FNVRFGDPECEVLMPLIENPLELILAATQRRLRHTKIKIKKEFAVGVVCASENYPYKSS
FT                   PKSEITVNNIPENSHISYAGVSLEDGKLMADGGRVLVCVGTGKSIEEAQKNAYKLCDNV
FT                   NFKGKQYRKDIAHQVLK"
FT   gene            1300932..1301384
FT                   /locus_tag="C1336_000260097"
FT                   /note="C1336_000260097 identified by Glimmer3 with a raw
FT                   score of 10.54."
FT   CDS             1300932..1301384
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260097"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260097 identified by Glimmer3 with a raw
FT                   score of 10.54. Gene function extrapolated from
FT                   CJJ81176_1267 (CP000538.1) after blastn alignment (98.45
FT                   percent identity over a 453 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30686.1"
FT                   /translation="MKENLQDRLERENLKIASFGKRVLAFLIDDMIISLIVFIIFYDRL
FT                   IQAKDLFETTQIIGNFYLGFILLHFSYQAIFTYLYGASLGKILCKIIILDENLLDKPNL
FT                   IQSCIRSAIRQVSAMVFMLGFAWALSNDLRKAWEDYLARTIVVDVA"
FT   gene            1301374..1303422
FT                   /locus_tag="C1336_000260098"
FT                   /note="C1336_000260098 identified by Glimmer3 with a raw
FT                   score of 8.45."
FT   CDS             1301374..1303422
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260098"
FT                   /product="organic solvent tolerance protein, putative"
FT                   /note="C1336_000260098 identified by Glimmer3 with a raw
FT                   score of 8.45. Gene function extrapolated from CJE1389
FT                   (CP000025.1) after blastn alignment (99.23 percent identity
FT                   over a 777 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30687.1"
FT                   /translation="MWRKFSLLLGTSIALSAAQVDIYALDAKKEGDILTANNDVIIFSD
FT                   FYFITANKAIYNEKTGDVELFGDVNILRGQNERSHSDYAKINLNSNQADFSNFFFSNNN
FT                   LEVWFQSKTSHLNDKVFESKISAVSSCNVEDPDWEIRFSKGWLNRETNFVHLYNARLYV
FT                   KNTPVFYLPYFGFSADTHRQSGLLIPKIVLKSSEGLYYEQPIYIATQENWDLELDPQIR
FT                   TNRGFGLYSTLRFLDSPYSIGELNFGAFRENSSYFHDENLKNQTHYGIELKYSRDDLIK
FT                   SLLSDNFQEGLWIDATYLNDVDYLNLGSRDYRDLNSLVTSKINYFLADENNFYGAYARY
FT                   YIDTSKLSNNTTLQEYPSFQYHRFLNNLFDERLRYSFDASFHNFYRPAGSYANELNLDL
FT                   PISYHNAFFGDFLHFTFTERFYASFVNYSNDPERNHEHYFRNTHDFNLYTDLSKAYENF
FT                   FHTLNLGVNYILPGAKSGKITQDYLEEYDKENEHTSLYAVQYFYNNEGQKKLKHRFSLD
FT                   YLNKQNKFYELENLLTYYFNENINLNSEVLYSYEQSRFTNVISQIEVNTNSKFNWMFSH
FT                   AYQNDEYGKYSFIGTRANYIATPNYNLFGGIWFDTQRAHANMWELGYTYQRKCWNYSLM
FT                   YRERIDPQLTSGGITAKNQSGVYFIFNFYPLGGVKYDFSLAESENKI"
FT   gene            1303492..1305651
FT                   /locus_tag="C1336_000260099"
FT                   /note="C1336_000260099 identified by Glimmer3 with a raw
FT                   score of 16.18."
FT   CDS             1303492..1305651
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260099"
FT                   /product="polyribonucleotide nucleotidyltransferase"
FT                   /note="C1336_000260099 identified by Glimmer3 with a raw
FT                   score of 16.18. Gene function extrapolated from
FT                   CJJ81176_1269 (CP000538.1) after blastn alignment (97.89
FT                   percent identity over a 2089 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30688.1"
FT                   /translation="MQYSIEINKNTEIFDIDKVAKQAAGAVLMRQGKSVVLATVAREEK
FT                   QVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKGYAY
FT                   PTQIVVMVLSADPKVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGKIDGNFILNPNNE
FT                   ELQNSTLDLYVAGVKDELLMIEMRALPDQKENEIFIEAPYADVLTQTTSQNMNELSEDE
FT                   ILEALNLAQKAILNGSNAYEEAFSKHKKNSQIELKNEIEHPEILAFIENNFQKQIKEAI
FT                   NQMAKSERASELNKIAKEILNLEIAKDWSEESVLNTLAKVKRKLIREQILNEGKRADGR
FT                   SLNEVRPISIETNLLPNAHGSCLFTRGQTQALVVATLGGENDAQMIDLLTEKNPISERF
FT                   MVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSIDENYPYVIRLVSEILESNGS
FT                   SSMATVCGGSLALKAAGVPSLKLVAGVAMGLIFEDSKFAVLTDIMGLEDHDGDMDFKVA
FT                   GSKDGVTALQMDIKLGGIDQETLKQALYQAKEGRIHILNIMEEAAKEIVVNEEVLPKLE
FT                   LFSVDPSKIVDIIGQAGKTIKEIIEKFGVSIDLDREKGEVKIAGNQNEQIKAAKDYIIN
FT                   ITSSQKGTKKGSKDKDISDFELGQEFQGIVKKIAPFGAFVELKNGVDGLLHSSKSKHLN
FT                   LSENQSLKVKISEIKNGKISVDLCE"
FT   gene            1305648..1306130
FT                   /locus_tag="C1336_000260100"
FT                   /note="C1336_000260100 identified by Glimmer3 with a raw
FT                   score of 9.19."
FT   CDS             1305648..1306130
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260100"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260100 identified by Glimmer3 with a raw
FT                   score of 9.19. Gene function extrapolated from
FT                   JJD26997_0471 (CP000768.1) after blastn alignment (95.64
FT                   percent identity over a 482 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30689.1"
FT                   /translation="MSEFLTHPFEPFFDKDSKILILGSFPSIKSRQDGFYYQHPRNRFW
FT                   PILETLFDVKLENITEQQAFLRKKHIALWDVLQSCKIKNSDDKTISYAKANDLNLILSQ
FT                   AKIQAIFTTGQSAYKFFTKFHSHLKAIALPSTSPANLNFSFEQLLQNYEIIKKFTK"
FT   gene            complement(1306168..1306830)
FT                   /locus_tag="C1336_000260101"
FT                   /note="C1336_000260101 identified by Glimmer3 with a raw
FT                   score of 13.21."
FT   CDS             complement(1306168..1306830)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260101"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260101 identified by Glimmer3 with a raw
FT                   score of 13.21. Gene function extrapolated from CJE1392
FT                   (CP000025.1) after blastn alignment (98.50 percent identity
FT                   over a 599 bp alignment) - for clarity, the original
FT                   product name 'membrane protein, putative' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30690.1"
FT                   /translation="MEMILFVLAVILLVLLFVVLFRQYKSPKIEEKSTQSFSDIMQLKS
FT                   IGELSVFQVFSKEIVTKKDSAFNGIWKNLLGWSLSERQIALIFEFEITFLYDLRDKNFD
FT                   ILPLGDDAYKIIMPECRYKHSIIDMKFYDEKNAKFLPFLLPDSINSTGISFSESDKNKL
FT                   IKEAKDEVKDLSLNLIQNLESKIHKSAKDTLEAIAKGFGAKRVEFEFKDNTQKLDVN"
FT   gene            complement(1306848..1308032)
FT                   /locus_tag="C1336_000260102"
FT                   /note="C1336_000260102 identified by Glimmer3 with a raw
FT                   score of 14.32."
FT   CDS             complement(1306848..1308032)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260102"
FT                   /product="putative efflux pump"
FT                   /note="C1336_000260102 identified by Glimmer3 with a raw
FT                   score of 14.32. Gene function extrapolated from C8J_1201
FT                   (CP000814.1) after blastn alignment (98.82 percent identity
FT                   over a 169 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30691.1"
FT                   /translation="MENFNRTLLVCWFGVFTTSMGLSQIAPILPFYIKELGHVNTSEIA
FT                   FYSGLAFGITPLFMAVFSPLWAFLGAKYGYKNMLLRASFGMSVLTLWLSFAHSALEVVF
FT                   VRGLTGIISGFTSAAVVFIAVIAPKEKVAYALGTLSTASISGSLLGPLFGGFVAEFFSI
FT                   SAVFDVVAFLIACSFVTIYFFIHERKIQKEAKKNTQKVKENKTLIIVLFITTFVIQFGT
FT                   FGVMPILSIYVEQIHQGGNLALWAGIVVAASGISNLFFAPKLGKIADKIGPSKIILIAL
FT                   IFCGICFYLQAVASNVYTLIFVRLLIGVGLGGLLPCVNALLKKSVSAKNLSVIFGFNQT
FT                   CQFLGNFCGAFGGGIMASHFSVEFVFTFVCLIFIINAFIFLAFEKKYIFSNQGL"
FT   gene            1308086..1308541
FT                   /locus_tag="C1336_000260103"
FT                   /note="C1336_000260103 identified by Glimmer3 with a raw
FT                   score of 11.72."
FT   CDS             1308086..1308541
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260103"
FT                   /product="low molecular weight phosphotyrosine protein
FT                   phosphatase family protein"
FT                   /note="C1336_000260103 identified by Glimmer3 with a raw
FT                   score of 11.72. Gene function extrapolated from
FT                   JJD26997_0467 (CP000768.1) after blastn alignment (97.66
FT                   percent identity over a 256 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30692.1"
FT                   /translation="MKKILFICLGNICRSPMAEFIMKDLVKKANLEKEFFISSAGTSGE
FT                   HDGEGMHYGTKNKLAQLNIEHKNFISKKLTQKLCDESDFLITMDNSNFKNVLKNFTNTQ
FT                   NKVLKITDFSPSLNYNEVPDPWYSGNFDETYKILSLACKNLLVFLSK"
FT   gene            1308793..1310094
FT                   /locus_tag="C1336_000260104"
FT                   /note="C1336_000260104 identified by Glimmer3 with a raw
FT                   score of 9.71."
FT   CDS             1308793..1310094
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260104"
FT                   /product="major outer membrane protein"
FT                   /note="C1336_000260104 identified by Glimmer3 with a raw
FT                   score of 9.71. Gene function extrapolated from C8J_1203
FT                   (CP000814.1) after blastn alignment (97.62 percent identity
FT                   over a 84 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30693.1"
FT                   /translation="MKLVKLSLVAALAAGAFSAANATPLEEAIKDIDVSGVLRYRYESS
FT                   NPWSNDNYGSGISGKQDHKYRAQVNFNAAIADNFKAFVQFDYNSKDGGYGENSISNTSD
FT                   TLSVRQLYLTYTNEDVATSVIAGKQQLNTIWTDNGVDGLVGTGIKVVNNSIDGLTLAAF
FT                   AVDSFNEASDSTVIITQDISNKITGVQFNRGNPQGDSDTSGALNWDKNLYGAAAIGSYE
FT                   FLGGQFNPQLWLAYMSDNAFLYAVDAAYSTTIFDGINWTLEGAYLGNSLDSKLKNALSN
FT                   QAANGNFFALRGSVELNGWDASLGGLYYGKKDKVTLTTIEDQGNLGSLLAGEEIFYTNG
FT                   SNLNGDIGRNIFGYVTAGYTFNETVRVGADFVYGGTKTGEIGNGGKKLEAVARVDYKYS
FT                   PKLNFSAFYSYVNVNTDPESTHHDAVRLQALYKF"
FT   gene            complement(1310212..1311336)
FT                   /locus_tag="C1336_000260105"
FT                   /note="C1336_000260105 identified by Glimmer3 with a raw
FT                   score of 14.76."
FT   CDS             complement(1310212..1311336)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260105"
FT                   /product="co-chaperone protein DnaJ"
FT                   /note="C1336_000260105 identified by Glimmer3 with a raw
FT                   score of 14.76. Gene function extrapolated from C8J_1204
FT                   (CP000814.1) after blastn alignment (97.32 percent identity
FT                   over a 1121 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30694.1"
FT                   /translation="MEISYYEILEITQSADKETIKKAYRKMALKYHPDRNQGDKEAEDK
FT                   FKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSNSSGFGGFEDLGDIFSSFFGEGFG
FT                   SSSRRRKSSNDEKIPSDFIVNLKLSFKEAVFGCKKNIDFTYKCSCKTCNGTGAKDGKLQ
FT                   TCPKCQGRGQVGISQGFITFAQTCPDCQGSGEKASEKCSDCKGLGYNESKDSVELNIPE
FT                   GVDTGMKLRVNAKGNILKNGTRGDMYVKIIAAEDDTFIRDDDDIYIEFPVFFTQAILGE
FT                   SIKVPTIRGEASLNLPKGAKDGQRFVLEKEGVKDVHSSRIGNQIVQISIKFPTSLNDEQ
FT                   KELLEKLSESFGIKDGMHQEQKGLFEKIANWFKS"
FT   gene            1311491..1312162
FT                   /locus_tag="C1336_000260106"
FT                   /note="C1336_000260106 identified by Glimmer3 with a raw
FT                   score of 10.69."
FT   CDS             1311491..1312162
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260106"
FT                   /product="two-component regulator"
FT                   /note="C1336_000260106 identified by Glimmer3 with a raw
FT                   score of 10.69. Gene function extrapolated from C8J_1205
FT                   (CP000814.1) after blastn alignment (96.88 percent identity
FT                   over a 672 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30695.1"
FT                   /translation="MINVLMIEDDPDFAQLLSEYLAQFNIKITNFENPKSALNVGVQGY
FT                   DCLILDLTLPGIDGLEVCREIRQKSNIPIIISSARGDLSDKVVGLQIGADDYLPKPYDP
FT                   KEMYARIMSLIRRTKRVEHANNENINSAFKIDERRHEITYEDKVLTLTPAEFEILEYLI
FT                   QQHGYSVSREQLVSRCKNLKDKDSKSLDVIIGRLRVKIGDSSKSPKHIFSVRGIGYKLI
FT                   G"
FT   gene            1312159..1313394
FT                   /locus_tag="C1336_000260107"
FT                   /note="C1336_000260107 identified by Glimmer3 with a raw
FT                   score of 10.97."
FT   CDS             1312159..1313394
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260107"
FT                   /product="two-component sensor (histidine kinase)"
FT                   /note="C1336_000260107 identified by Glimmer3 with a raw
FT                   score of 10.97. Gene function extrapolated from Cj1262
FT                   (AL111168.1) after blastn alignment (96.91 percent identity
FT                   over a 777 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30696.1"
FT                   /translation="MTKNYSIYTKLIILFVVTFFLVCVLFIVLLKIEGSAYNEEESLKQ
FT                   ENLIKNLLISYENTSGAKIGSYLENSGFNTIQNPYLVKSIRNNGQSLFKANGEFCTLSS
FT                   LKYHSNLYFDVQCKDFDGLYEENTSDRVYNLLLIGFFSFSLLVVFMYFSVLKSLEPLKK
FT                   LRRQVAKVANGEQPDFLDYQEDEVGKIAFEFQKAFKKNQELIQSRQLFLRTIMHELKTP
FT                   IGKGRIISEMIKEDRQKERLIAIFLRMDSLINEFAKIENLFSKNYNLHFKPSRFSTILE
FT                   EAKEHLMRDDFNKVVKVDIRDDALINVDMEIFSVILKNLIDNALKYSNNGTCELFCCKE
FT                   CFTIKNPGKPLAEPIEHYLEAFAREKHNQVKGMGLGLYIVSEVCKLHNFDLIYFYDDGK
FT                   HCFKIFFGDKEK"
FT   gene            1313394..1313966
FT                   /locus_tag="C1336_000260108"
FT                   /note="C1336_000260108 identified by Glimmer3 with a raw
FT                   score of 13.05."
FT   CDS             1313394..1313966
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260108"
FT                   /product="recombination protein RecR"
FT                   /note="C1336_000260108 identified by Glimmer3 with a raw
FT                   score of 13.05. Gene function extrapolated from
FT                   CJJ81176_1279 (CP000538.1) after blastn alignment (98.08
FT                   percent identity over a 573 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30697.1"
FT                   /translation="MAKGLEKFNELVESFANLPTIGKKTAIRLAYHLCINNQIDGMKLA
FT                   HNIENAIRFIKPCEQCGALSENELCEICSDEERNKNILCIVESPKDILTLEESQSYNGL
FT                   YFVLDELNEEKLEKLKQIILKLNISELIFALTHSINSDATIFFIEDKFKDLNLTFSKIA
FT                   QGIPSGVNLENVDLISLNKAMNFRTKI"
FT   gene            complement(1313963..1314466)
FT                   /locus_tag="C1336_000260109"
FT                   /note="C1336_000260109 identified by Glimmer3 with a raw
FT                   score of 16.39."
FT   CDS             complement(1313963..1314466)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260109"
FT                   /product="putative hydrogenase maturation protease"
FT                   /note="C1336_000260109 identified by Glimmer3 with a raw
FT                   score of 16.39. Gene function extrapolated from C8J_1208
FT                   (CP000814.1) after blastn alignment (97.82 percent identity
FT                   over a 504 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30698.1"
FT                   /translation="MFADEGLGVHLCKQLEKNYKFTHPKFTLDFIDGGTLALQLSYIIA
FT                   RYDRLIVLDCIEAQDASIGDVFFFPYDAMPNKISWSGSAHEIEMLQTLQYMELAGDLPK
FT                   THILACVPKRIEAMSFKLSDELIQGAKIMEKTLLDFLSKEGFIYEKIADFSLQELADIS
FT                   YKNF"
FT   gene            complement(1314496..1315188)
FT                   /locus_tag="C1336_000260110"
FT                   /note="C1336_000260110 identified by Glimmer3 with a raw
FT                   score of 12.50."
FT   CDS             complement(1314496..1315188)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260110"
FT                   /product="quinone-reactive Ni/Fe hydrogenase, cytochrome b
FT                   subunit"
FT                   /note="C1336_000260110 identified by Glimmer3 with a raw
FT                   score of 12.50. Gene function extrapolated from
FT                   CJJ81176_1281 (CP000538.1) after blastn alignment (97.40
FT                   percent identity over a 693 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30699.1"
FT                   /translation="MQNKEEKLQRKAEYEFSIGLRLTHWIRAIAIVILIGTGYYLSYVF
FT                   QSPISNGEPVNFMQAKYRLVHQAVGFVLIACIIFKVYLFFCDKVSAKERRSAWDIFNIK
FT                   LWIEQVKFYIFLGKHPHLKGVYNPLQFVTYFFFYLVMLGIILTGLILYTHTYHEGLGGL
FT                   LYHILRPLEAAMGGLADVRTYHRILMWVIMIFVPVHIYMAIFNAVKGKDGAMDAIISGY
FT                   KFVKEEKH"
FT   gene            complement(1315199..1316914)
FT                   /locus_tag="C1336_000260111"
FT                   /note="C1336_000260111 identified by Glimmer3 with a raw
FT                   score of 14.30."
FT   CDS             complement(1315199..1316914)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260111"
FT                   /product="quinone-reactive Ni/Fe-hydrogenase, large
FT                   subunit"
FT                   /note="C1336_000260111 identified by Glimmer3 with a raw
FT                   score of 14.30. Gene function extrapolated from
FT                   CJJ81176_1282 (CP000538.1) after blastn alignment (97.90
FT                   percent identity over a 1716 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30700.1"
FT                   /translation="MSQKIIVDPITRIEGHLRVEVVVDDNNVVKEAYAGSTLWRGIETI
FT                   VKGRDPRDAGFMTQRICGVCTFSHYKAGIVAVENALGITPPLNALLTRTLMNAALFLHD
FT                   HIVHFYQLHGLDWADVVSALSADVKKASDEAFKYTPNPYATGADKLLEVQQRLKTFVDK
FT                   GNLGPFANAYYGHPTYRLSPEQNLIVLSHYLECLRIQRIIAQCMAIFGAKNPHPQSLTV
FT                   GGVTCVMDLLDPARMGEYMVKFQEVQDFVNRAYYPDLVMAGKAYAHEASVLNDIGVNNL
FT                   YTFKEFQLGRDEWLFESGIIKNGDLSKVYEVEEDKITEEATHSWYADNEPLHPYDGKTN
FT                   PNYTGLVDGESVDHHGNNVHSKVFDTKGKYSWIKAPRYEGNPMQVGPLANIVVNYAKGN
FT                   QNVVPVVDEFLKETGLPLNAVFSTLGRTAARCIEAKIVANNALKAFNNLVENLKVDQST
FT                   CAPYVIDNSKEYKGRYMGHVPRGTLSHWCRIKNGVIENWQAVVPSTWNASPKDANGVGG
FT                   SYEQCLIGLKIADVKQPLEIIRKIHSYDPCIACAVHVMDTKGNNLSEYKVNVNL"
FT   gene            complement(1316917..1318056)
FT                   /locus_tag="C1336_000260112"
FT                   /note="C1336_000260112 identified by Glimmer3 with a raw
FT                   score of 14.26."
FT   CDS             complement(1316917..1318056)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260112"
FT                   /product="quinone-reactive Ni/Fe-hydrogenase, small
FT                   subunit"
FT                   /note="C1336_000260112 identified by Glimmer3 with a raw
FT                   score of 14.26. Gene function extrapolated from
FT                   JJD26997_0458 (CP000768.1) after blastn alignment (97.46
FT                   percent identity over a 1140 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30701.1"
FT                   /translation="MIDYHQIESRLSALEKLPSLKDNDSIAKALEKSGFSRRDFMKWAG
FT                   AMTAFLALPASFTPMVAKAAELADRLPVVWLHMAECTGCSESLLRSDTPTIDSLIFDYI
FT                   SLEYHETVMAAAGWQAEENLESAIQKHKNKYILMVEGGIPMGDTEHFLTIGAHGKTGYE
FT                   LSKMASENALAIFAIGTCSSFGGIQAARPNPSNAQPLSKVTSKTVINVPGCPPSEKNIV
FT                   GNVLHYLLFGELPALDVYNRPKWAYGLRIHDLCERRGHFDAGEFVHAFGDEGAKQGFCL
FT                   YKVGCKGPYTFNNCSRERFNQHTSWPIQAGHGCIGCSEPDFWDTMGPFEEPMASRKFDT
FT                   VFGLGADSVSDKIGIGVLTLTGVAIAAHAVISSMQKDKE"
FT   gene            complement(1318176..1320017)
FT                   /locus_tag="C1336_000260113"
FT                   /note="C1336_000260113 identified by Glimmer3 with a raw
FT                   score of 15.18."
FT   CDS             complement(1318176..1320017)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260113"
FT                   /product="putative FAD dependent oxidoreductase"
FT                   /note="C1336_000260113 identified by Glimmer3 with a raw
FT                   score of 15.18. Gene function extrapolated from Cj1268c
FT                   (AL111168.1) after blastn alignment (99.05 percent identity
FT                   over a 105 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30702.1"
FT                   /translation="MKKAKLIFKDNTPFSLDFDDFYFNSKDGLNESKFVYTHSFEWKNQ
FT                   ENFIIAESGFGIGLNFFLTLKRFLETTPFKRPKKLFYISIEAFYIEKEQLREIYQKLGF
FT                   YEEFKELLEQFLKFYPKAKEGIYRFYFEDCFLDLVFEDIAILKELDFKADIWYLDGFSP
FT                   NKNSQMFDENLIFEVARLSKKNTQICTFSSASFLQKNLKKYGFRVEKTKGFRKREMIKA
FT                   YLENELEFKDKEAYFSRTFSSLKNKKVAIIGAGISSAVLAYELSLRGFEIDVFEKHLEL
FT                   GKGASGNESGILSSLILKPKVNLGEFSELSFIEASRFYRQILDLEFKGVVEFAHNDLMQ
FT                   ERFDTQRENVLFKISKNQAFLEEGGVIFPKNLVKNLFEKSKACIYFNHEFQAYKFENEC
FT                   FTLKFKNDIVKSDYAVLIYAMGADTKDFVFYDEMKLSKVRGQVTHLKPFLDSPFPLSSK
FT                   AYICPIKDDLQVIGASYDRLDTSLESKEEDDKQNIENIAEFIDKNTKLEIIGSKVGFRS
FT                   YSSDRFMIVGNAYDEVFYKEEYKALLWTKNKEQKPAKMSCNLYFNFAHGSRGFSTSVLA
FT                   ARYLCALINNEPLCLEKKYIHAIHPARFLIRKLKKGL"
FT   gene            complement(1320014..1321993)
FT                   /locus_tag="C1336_000260114"
FT                   /note="C1336_000260114 identified by Glimmer3 with a raw
FT                   score of 12.98."
FT   CDS             complement(1320014..1321993)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260114"
FT                   /product="N-acetylmuramoyl-L-alanine amidase"
FT                   /note="C1336_000260114 identified by Glimmer3 with a raw
FT                   score of 12.98. Gene function extrapolated from Cj1269c
FT                   (AL111168.1) after blastn alignment (98.48 percent identity
FT                   over a 329 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30703.1"
FT                   /translation="MAKIFVFLVFVFTTLFGAYENELANFDKNFISSKSEVQVKFHHQL
FT                   KSLYIQSVINEDEKTKIEILKRLIISSNTLNLDDKSYANELKESGISEASINALRKAVI
FT                   KDIKVQNISQDTEKSTFKPVKTVQKSEKKSPNEQIKNIEKIDSKTSQEPKSSIVSKTKS
FT                   DDKIYVLKSSKTSQGVELELNTNLDKNQLKSFALDEKGNYRFISDFDGVLEGGKKEFKF
FT                   DDYRLVISQFNPKTIRIVVYAKEKIPIEISFKEEKIIFSKEITSQKKTEQVSKISEKKQ
FT                   DQKTEIKTKVLEIKKQDKKTNNEKEDQGPLYVLDVDKISNAVVLNLSDDLDEKEIAIFE
FT                   TKDQKFRYIVSFKGVLEGNRKSFTFGQNTIVVTQYNPKIVRVVLSAPKEFKLLKKLDNK
FT                   NLTLGFHAQTSSQSVDKKATQSFNKTLSTRYKSGKLIVIDAGHGGKDSGALSDKKGSLK
FT                   EKDIVLSAALKLGNELKKRGYKVLYTRSSDKFINLRDRTKYANDKRADLFISIHANAAP
FT                   NAAKAKSSEGVETFFLSPARSERSKKAAEKENKGDFEEINYFSKQSILNFLNREKIVAS
FT                   NKLAIDVQKNILIQTRKKYKIVDGGVREAPFWVLVGAQMPAILIEIGYITHPNEGKRIA
FT                   NKVFQDLLVKGIADGVESYFYNNR"
FT   gene            complement(1321993..1323084)
FT                   /locus_tag="C1336_000260115"
FT                   /note="C1336_000260115 identified by Glimmer3 with a raw
FT                   score of 14.79."
FT   CDS             complement(1321993..1323084)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260115"
FT                   /product="oxidoreductase, 2-nitropropane dioxygenase
FT                   family"
FT                   /note="C1336_000260115 identified by Glimmer3 with a raw
FT                   score of 14.79. Gene function extrapolated from CJE1406
FT                   (CP000025.1) after blastn alignment (98.08 percent identity
FT                   over a 1092 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30704.1"
FT                   /translation="MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGIIS
FT                   SVGTGYYEERKYASKELNAKPYGSENFYSRKGLQALINNARKVCGDAPLGCNILCASND
FT                   YARIARDACEVGFNVIVSGAGLPTNLPEFTVDFPDVALVPIISSAKALKIICKRWQSRY
FT                   NRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAGGIWD
FT                   KKDIENAISLGASGVQMGTRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGYPARGV
FT                   RTNLLNLVDKRMGPKINCISNCVAPCGRGKEATKVGYCIADRLFDAWSGKKETGLFFTG
FT                   ANGYRLDKLISVKELMEKLVNGE"
FT   gene            complement(1323081..1324286)
FT                   /locus_tag="C1336_000260116"
FT                   /note="C1336_000260116 identified by Glimmer3 with a raw
FT                   score of 15.14."
FT   CDS             complement(1323081..1324286)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260116"
FT                   /product="tyrosyl-tRNA synthetase"
FT                   /note="C1336_000260116 identified by Glimmer3 with a raw
FT                   score of 15.14. Gene function extrapolated from C8J_1215
FT                   (CP000814.1) after blastn alignment (98.99 percent identity
FT                   over a 1190 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30705.1"
FT                   /translation="MDIKKILAEVKRGCAELIDEERIENLIKNYYEKGENFFIKAGFDP
FT                   TAPDLHLGHSVVLTKMAFLQKHGAIVQFLIGDFTGQIGDPSGKSATRKKLDKEQVLINA
FT                   KTYETQVFKVLDKEKTQIKFNSTWLNELGAAGIVELTSTFSVARMLERDDFTKRFKEQS
FT                   PISICEFLYPLLQGYDSVALKSDIEMGGTDQKFNLLMGRQLQRVYNIGKEQAVIMMPLL
FT                   EGLDGVNKMSKSLNNYIGVTEKANDMYAKILSISDELMFRYYELLSQKSLEEIAQIKKD
FT                   IEQGNLHPKKAKENLALEITERFHSKEEANNAKSEFDRIHSQNALPSDMAEFEIQGKIW
FT                   LAKALVECGLESSTSAARRSISANAVSVNSQKVSDEQMHLERGEYILQIGKRKFAKLKV
FT                   KE"
FT   gene            complement(1324298..1326493)
FT                   /locus_tag="C1336_000260117"
FT                   /note="C1336_000260117 identified by Glimmer3 with a raw
FT                   score of 10.54."
FT   CDS             complement(1324298..1326493)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260117"
FT                   /product="RelA/SpoT family protein"
FT                   /note="C1336_000260117 identified by Glimmer3 with a raw
FT                   score of 10.54. Gene function extrapolated from CJE1408
FT                   (CP000025.1) after blastn alignment (99.44 percent identity
FT                   over a 179 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30706.1"
FT                   /translation="MKPIDEELLLEQLIDNVKNCKDLEAAKALLFEICGHDAILEKAVD
FT                   YCIFCHEGQFRKSGEPYAVHPILVATLVGFLSENKSNILAALLHDVIEDTNCTEEELRE
FT                   QFGSEVLKLVLGLTKIIEIREDNLISSKSKKSLTKSALTFRNMLLASIEDVGVLIVKLC
FT                   DRLHNMLTLDILREDKQKRISEETLVVYAPIAHRLGISSIKNYLEDLSFKYLMPDEYKL
FT                   IDNYINSNNQEMQLGLNEFISKIELLFLSNGFRQGSFEIQKRIKHSYSIYLKMQRKGIG
FT                   IEEVLDLLGVRILVEKVSDCYLALGILHTHFNPLVSRFKDYIALPKQNGYQTIHTTLFD
FT                   TKSIIEAQIRTFDMHKIAEFGIAAHWKYKEDGSVVAPRLDWLTDISMQSINNLENAEDY
FT                   NAIELYEYAKDSLYVEDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHAKSAYVNRI
FT                   KVPLLTELKNGDIVRVVTSNDKFYRCSWIDSVKTGKAKASIREFCKQKIREINLASSIN
FT                   MLSFIFGVDKNRIETWIEKENLARRIRQVATDSAYLKDIVNGLKKYAKKSYWFDKYEIK
FT                   EQKIGNFTLYCNHKIANVDFDFCCHPKRGDAVLAFVKGGNAIVHHKLCDRADKMIDNNQ
FT                   DMVFIKWDSNIPKSYKLIFSLENKKGVLAEFLAFLAKMQINLLTINLSSDLNSAVDYFE
FT                   ITMEIPDNINPDSVKDRLKSRCKILDFTSLNDAYKEG"
FT   gene            complement(1326477..1326701)
FT                   /locus_tag="C1336_000260118"
FT                   /note="C1336_000260118 identified by Glimmer3 with a raw
FT                   score of 17.16."
FT   CDS             complement(1326477..1326701)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260118"
FT                   /product="DNA-directed RNA polymerase subunit omega"
FT                   /note="C1336_000260118 identified by Glimmer3 with a raw
FT                   score of 17.16. Gene function extrapolated from C8J_1217
FT                   (CP000814.1) after blastn alignment (94.55 percent identity
FT                   over a 110 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30707.1"
FT                   /translation="MDKRIEEVAAKALEKMGNDRYRLSLVVAKRAEQLANGATPLVDFD
FT                   KNKNKLADIALYEIAENKITLEGLVETNR"
FT   gene            complement(1326712..1327431)
FT                   /locus_tag="C1336_000260119"
FT                   /note="C1336_000260119 identified by Glimmer3 with a raw
FT                   score of 15.64."
FT   CDS             complement(1326712..1327431)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260119"
FT                   /product="uridylate kinase"
FT                   /note="C1336_000260119 identified by Glimmer3 with a raw
FT                   score of 15.64. Gene function extrapolated from
FT                   CJJ81176_1290 (CP000538.1) after blastn alignment (97.50
FT                   percent identity over a 720 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30708.1"
FT                   /translation="MQERKRVLVKFSGEALAGENGFGIENSILKFIASEIKELIKNQIE
FT                   VGIVIGGGNIIRGVSAAKGGLIKRTSGDHMGMLATVINAIAIQEALESSGLEVRVQSAI
FT                   QMEAFCETYIMRRAQRHLEKGRVVVFAAGTGNPYFTTDTTAILRAVEIDADMVIKATKV
FT                   NGVYDKDPKKFDDAVFLNTLSYDEAMQDNIKVMDDTAIALAKDNKLPIVVCNMFEEGNL
FT                   LKIIQGDTSLCSIVKNN"
FT   gene            complement(1327483..1328676)
FT                   /locus_tag="C1336_000260120"
FT                   /note="C1336_000260120 identified by Glimmer3 with a raw
FT                   score of 12.99."
FT   CDS             complement(1327483..1328676)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260120"
FT                   /product="peptidase, M23/M37 family"
FT                   /note="C1336_000260120 identified by Glimmer3 with a raw
FT                   score of 12.99. Gene function extrapolated from CJE1411
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 98 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30709.1"
FT                   /translation="MRKNILIFFCFFLFVDISLANAINEKTKSLEENKRIQEQLNKKLE
FT                   DLASDILNGEKSLKDLSLQIESLNSQTSKLEASAKAQNQELNTLTSQNEDLLKSKSNME
FT                   GKLISLMAKDFAYDLPIPQGYIESEESFMAFEILGSLNKVLNEEIFKISKDYEGVSRLI
FT                   DDKQAQIKKINESLKDYNAQLAKLQSLKQKQISEINKQKTDRAIYAKKLDDLQAQQEEL
FT                   RKTLNQLKIINDKEDANSNKNDTKIVKNNQQIRQLGSSYQGSSVKRYTGKKTIAPLDSF
FT                   TVKQKFGNYVDPVYNLKIFNENVVLRSNKSDAVVKNVLDGKIVFAKDTSMLARVVIVEH
FT                   DNGIHTIYAHLDKIAPNIKVGKNIKKGAVVGRIKNDLTFEVTQKNFHINPLELISLN"
FT   gene            complement(1328673..1329479)
FT                   /locus_tag="C1336_000260121"
FT                   /note="C1336_000260121 identified by Glimmer3 with a raw
FT                   score of 9.07."
FT   CDS             complement(1328673..1329479)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260121"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000260121 identified by Glimmer3 with a raw
FT                   score of 9.07. Gene function extrapolated from C8J_1220
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 112 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30710.1"
FT                   /translation="MKFFKTHLSLILSLLFMMFAFEFILITNATLKHYEELVNKDYNII
FT                   VVSKTELDQNVVKTKVPFFAGLESLDPKDLIDRLKNDVSEKNLKVLKDSLPKFYTLKLN
FT                   SLPDQNELNSIKNQLLNIVGVSKVETFSKTHDKIYSLLILMKFVFWLFLFIIILLAFVL
FT                   FLKQMRIWLYEHTDRIEIMCLFGAPFWFRSFMLYKVVVVDCFIAFVILLAFFTQIFDLS
FT                   IIQESLKAVDIIFPPINFILHLTLIFLATLFICLLCVNTVMFKVKR"
FT   gene            complement(1329466..1330131)
FT                   /locus_tag="C1336_000260122"
FT                   /note="C1336_000260122 identified by Glimmer3 with a raw
FT                   score of 13.83."
FT   CDS             complement(1329466..1330131)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260122"
FT                   /product="lipoprotein releasing system ATP-binding protein
FT                   LolD"
FT                   /note="C1336_000260122 identified by Glimmer3 with a raw
FT                   score of 13.83. Gene function extrapolated from
FT                   CJJ81176_1293 (CP000538.1) after blastn alignment (99.25
FT                   percent identity over a 666 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30711.1"
FT                   /translation="MPNLIQANKLTLGYDELVIKEASFAFKDDDFVFITGKSGSGKSTL
FT                   LKSFYGDLEPISGKLEVCGSLMNKIGNLELLKLRQRIGIIFQDYKLVQEYSVEKNVMLP
FT                   LMIKGYSKKVCHDQAAKLLKHVNLTFKADKLPNQLSGGEQQRVAMARALAHNPKLLLCD
FT                   EPTGNLDEYSSDIIWTLLKSARELLGTCVIVVTHRIPSNLRVDYRRFNIENGKMNEIF"
FT   gene            complement(1330201..1331379)
FT                   /locus_tag="C1336_000260123"
FT                   /note="C1336_000260123 identified by Glimmer3 with a raw
FT                   score of 10.31."
FT   CDS             complement(1330201..1331379)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260123"
FT                   /product="putative tRNA (guanine-N(7)-)-methyltransferase"
FT                   /note="C1336_000260123 identified by Glimmer3 with a raw
FT                   score of 10.31. Gene function extrapolated from Cj1278c
FT                   (AL111168.1) after blastn alignment (98.16 percent identity
FT                   over a 272 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30712.1"
FT                   /translation="MPNFRSKKIKEMNLPYSKDDVEFLWFAKNDNVSLIYTKVQEESFF
FT                   LQIKKTQNGFVIKGDKHIKPSKIGYLQKALKIFKEGFCEDIINEAFGLKNNALIEKTPF
FT                   IVDSFDELLSRLQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKLAKA
FT                   QNVNNILLIQSDARLLLSVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECARVLVQ
FT                   NGRFELRTDSFEYFNFTLKQFLTFPAPKFSLRKNENLEISSKYEDRWKKQEKNIYDLWV
FT                   WNFNQECKNYELNEFNLSSVEFSKEDLKKIEQNFKNITIKKDDFFLHFESIYKQDENLL
FT                   LKVAFGAFNKPEHCYLHLDKTINFAFKEPFKIQENIKAINELKEILKVQFKI"
FT   gene            complement(1331379..1332596)
FT                   /locus_tag="C1336_000260124"
FT                   /note="C1336_000260124 identified by Glimmer3 with a raw
FT                   score of 9.97."
FT   CDS             complement(1331379..1332596)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260124"
FT                   /product="putative fibronectin domain-containing
FT                   lipoprotein"
FT                   /note="C1336_000260124 identified by Glimmer3 with a raw
FT                   score of 9.97. Gene function extrapolated from Cj1279c
FT                   (AL111168.1) after blastn alignment (97.87 percent identity
FT                   over a 1218 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30713.1"
FT                   /translation="MSFYLSFLTLLLSACSVSQMNSLASSKEPAVNESLPKVESLKSLS
FT                   DMSNIAFEWEPLYNENIKGFYLYRSSDENPDFKLVGTIKDKFQTHYVDTKLEPGTKYRY
FT                   MMKSFNEQGQISEDGKVIEVSTAPRLEAVPFIQAVTNLPNRIKLIWRPHPDFRVDSYII
FT                   ERTKGDDKEFKKIAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKSEPSQVVSSTS
FT                   KALPPQVEHLSASTDGSNKIILTWDAPTYEDFSYYKVYSTSSSFLPFSVLAKTDKNSYE
FT                   DIVEGAGKSKYYKVTIVDKDGLESPMPKDGVEGRTLDNPLAPSIILAQSTSEGINLEWS
FT                   DNDTRAVEYEVRRYGGEQNAVFKGIKEKRLKDVKALPGVEYSYEVIAIDSAGLRSEPSS
FT                   KVKAAQ"
FT   gene            complement(1332559..1333527)
FT                   /locus_tag="C1336_000260125"
FT                   /note="C1336_000260125 identified by Glimmer3 with a raw
FT                   score of 9.13."
FT   CDS             complement(1332559..1333527)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260125"
FT                   /product="putative ribosomal pseudouridine synthase"
FT                   /note="C1336_000260125 identified by Glimmer3 with a raw
FT                   score of 9.13. Gene function extrapolated from C8J_1224
FT                   (CP000814.1) after blastn alignment (97.52 percent identity
FT                   over a 604 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30714.1"
FT                   /translation="MQTFLVDENSRLDVFLAKKLNQSRNQVALLIEKDCVQVNDKIQDK
FT                   NSFKLKNGDIISIASLKLYDEIKPQFEVDFDIDVLYEDEDLLVLNKPSNLVVHGASSVK
FT                   NATLVDWLIEKKYTLSNLGGEIRAGLVHRLDKDTSGAILIAKNNFTHQRLSEQLADKSM
FT                   GRIYLALIDLPLKEDKIIVEKFLMRSPSNAIKKIAIDKENKFSKNAKSAFINVVKTENL
FT                   TLMAAKLFTGRTHQIRAHLASLNRHILGDSLYGYKGKYDCRIMLHAYFLYFIHPKTKEQ
FT                   IFVKAPLMEDFKNIMFEQINLGENDEKISLEFLLEFFNSFA"
FT   gene            1333605..1334705
FT                   /locus_tag="C1336_000260126"
FT                   /note="C1336_000260126 identified by Glimmer3 with a raw
FT                   score of 8.80."
FT   CDS             1333605..1334705
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260126"
FT                   /product="rod shape-determining protein RodA, putative"
FT                   /note="C1336_000260126 identified by Glimmer3 with a raw
FT                   score of 8.80. Gene function extrapolated from CJE1417
FT                   (CP000025.1) after blastn alignment (98.52 percent identity
FT                   over a 677 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30715.1"
FT                   /translation="MFRLDRRILTHFDYMQPILFLPIILISFFLIFEANPFLAEKQFVY
FT                   ACVGLFAFMVFFFFPIRKFIWIIPVAYWINIFLLLSVDIFGVEKLGAKRWLEIPFTHFT
FT                   IQPSEIFKPSFILMLAYLIYQNPPPKNGYKLKQFIKLSFYIILPFLLIAKEPDLGSAMV
FT                   LLLVGFGVLFIMGVHYKIWLSIVIAISISSPIIYTHLLKPYQKQRIHDFISEKPSYQVA
FT                   QSMIAIGNGGLTGKSQDEATQTHFKFLPISTSDFIFAYMIERFGFIGGLTLIIFYILLI
FT                   FHLLSLNYKLKDDYFTRVAINCVALFIFIYAAVNISMTIGFAPVVGIPLPFFSYGGSSF
FT                   TIFMIFFGILQHLITFRYFWTDIKAK"
FT   gene            1334760..1334836
FT                   /locus_tag="C1336_000260155"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            1334760..1334836
FT                   /locus_tag="C1336_000260155"
FT                   /product="tRNA-Met"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(1334944..1335019)
FT                   /locus_tag="C1336_000260156"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(1334944..1335019)
FT                   /locus_tag="C1336_000260156"
FT                   /product="tRNA-Phe"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            1335160..1336503
FT                   /locus_tag="C1336_000260127"
FT                   /note="C1336_000260127 identified by Glimmer3 with a raw
FT                   score of 10.02."
FT   CDS             1335160..1336503
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260127"
FT                   /product="potassium uptake protein, TrkH family"
FT                   /note="C1336_000260127 identified by Glimmer3 with a raw
FT                   score of 10.02. Gene function extrapolated from
FT                   JJD26997_0441 (CP000768.1) after blastn alignment (100.00
FT                   percent identity over a 67 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30716.1"
FT                   /translation="MKQFGLDRRTFKILLAGYIIIALFGALLLHSSWAHTTPIDFLDAF
FT                   FTSTSAVSMTGLAVKNTAVDFTLAGQIIILALVQIGGLGYMGIGLFVYILIRKKVGFSA
FT                   RNLLKESLFYPSMDGLFKFFKKVLLFIFTIELIGAILLTMRFALEMNFKKALWFGIFHS
FT                   ISAFNNSGFTIFEHGLIAYKHDIAINLIITSLIIIGGLGYFVLVELYFFQRKKLQNLSL
FT                   HTKMVVIASIFLIFSSTLIIFAFEYSNPQTIGHFSFFDKILSSYFIAINYRTAGFNTLD
FT                   MGHLHDASLFFGSLFMVIGGAPGGTAGGMKVTTVMVLLLYAYWSIRDGRVRIFGHEIPR
FT                   ETISKAFIIAVGSAVYIVIAVILLSLLESNFDFIALLFETSSAFATVGISVGNGGTLSL
FT                   CALFSDPSKVIIIIMMLSGRIGVFAFLLSVFKQDKAIHLKFPEGKVNL"
FT   gene            1336514..1337164
FT                   /locus_tag="C1336_000260128"
FT                   /note="C1336_000260128 identified by Glimmer3 with a raw
FT                   score of 13.34."
FT   CDS             1336514..1337164
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260128"
FT                   /product="putative potassium uptake protein TrkA"
FT                   /note="C1336_000260128 identified by Glimmer3 with a raw
FT                   score of 13.34. Gene function extrapolated from
FT                   JJD26997_0439 (CP000768.1) after blastn alignment (98.00
FT                   percent identity over a 651 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30717.1"
FT                   /translation="MKNLNYGIIGLGKFGSVVADELIAGGHTVIVADKDEETLKSIQNP
FT                   PSYAYILDSTNISALKEAGFHDVEVVIVSIGENVEKSILTLMALKDIGVKNIIAKATSN
FT                   IHGQILSKLGATKVIYPEKESAKRLVKEFLTKDADYEVFDLSANTIRAIKINIDEKLAG
FT                   NSLKHVAQNMKVISYKKLNSDWEILPDLETTTVYSGDVVILLGTVKELREFEY"
FT   gene            complement(1337161..1337832)
FT                   /locus_tag="C1336_000260129"
FT                   /note="C1336_000260129 identified by Glimmer3 with a raw
FT                   score of 12.44."
FT   CDS             complement(1337161..1337832)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260129"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260129 identified by Glimmer3 with a raw
FT                   score of 12.44. Gene function extrapolated from C8J_1228
FT                   (CP000814.1) after blastn alignment (98.24 percent identity
FT                   over a 454 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30718.1"
FT                   /translation="MIFGKIDYINLLPLHIYLKKYPLPNGYKASMEYKKGVPSKLNKDL
FT                   FYRRIDAAIISSIESARKKYKNLDLGICANKRVLSVLVEKNTSNAKDPSSATSNALAKV
FT                   LKQDGKVIIGDKALKLYLKDPSKYIDLCAKWHEKTGLPFVFARFSCVQKKALYKQILKK
FT                   FSKTKIKIPYYILQNYAKTRDLDVKDVRYYLDEVIYHKISTKEKTALKRFVKACKALNL
FT                   T"
FT   gene            complement(1337838..1338464)
FT                   /locus_tag="C1336_000260130"
FT                   /note="C1336_000260130 identified by Glimmer3 with a raw
FT                   score of 15.83."
FT   CDS             complement(1337838..1338464)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260130"
FT                   /product="uracil phosphoribosyltransferase"
FT                   /note="C1336_000260130 identified by Glimmer3 with a raw
FT                   score of 15.83. Gene function extrapolated from C8J_1229
FT                   (CP000814.1) after blastn alignment (99.12 percent identity
FT                   over a 113 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30719.1"
FT                   /translation="MKNIHCINHPLIEHKLGILRAKETKPFQFRMLIDEISSFLLFEAS
FT                   KDFSLKEIEISTPIQKTTVKKLDEKIMICPILRAALGMLESVFKMIPDASVGFLGFVRN
FT                   EETLKADFYFQKLPKDAKQRTAIVIDPMFATGGTAIEACNFLKSQGVKKIKFISILATP
FT                   QGLQKFSQMHDDVEVFVACIDEGLNEKGYIIPGLGDAGDRVFNTL"
FT   gene            complement(1338461..1339696)
FT                   /locus_tag="C1336_000260131"
FT                   /note="C1336_000260131 identified by Glimmer3 with a raw
FT                   score of 18.34."
FT   CDS             complement(1338461..1339696)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260131"
FT                   /product="malate oxidoreductase"
FT                   /note="C1336_000260131 identified by Glimmer3 with a raw
FT                   score of 18.34. Gene function extrapolated from Cj1287c
FT                   (AL111168.1) after blastn alignment (97.33 percent identity
FT                   over a 1236 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30720.1"
FT                   /translation="MNLKEEALKYHLGGKIDIVPSKPMATSYDLSLAYSPGVAEPCLEI
FT                   AKDNELAYTYTNKANLVAIVSDGSAVLGLGNIGAQASKPVMEGKACLFKKFANVNAYDI
FT                   EIDVHSVEEIVNFCKALAPTVGGINLEDIAAPKCFEIEAALQDLGIPVMHDDQHGTAII
FT                   STAGLMNAMEISGKKFKDIKVVVSGAGAAGIASAKMYRNLGVENIILVDSKGVVSKDRN
FT                   DLTPQKLEFAVDSKEKTLKEVLKGADVFLGLSAPKILDDEMVLSMAKDPVIFALANPIP
FT                   EVMPEDVARLRKDAIVGTGRSDYPNQINNVLGFPFIFRGALDVRASKITENMKVAAAKA
FT                   LADLAKLPVSDAVKKAYNLSALEFGREYVIPKPFDERVKAAVSTAVAAAAVKDGVAKVK
FT                   NFNEKAYFESLK"
FT   gene            complement(1339708..1341090)
FT                   /locus_tag="C1336_000260132"
FT                   /note="C1336_000260132 identified by Glimmer3 with a raw
FT                   score of 16.00."
FT   CDS             complement(1339708..1341090)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260132"
FT                   /product="glutamyl-tRNA synthetase"
FT                   /note="C1336_000260132 identified by Glimmer3 with a raw
FT                   score of 16.00. Gene function extrapolated from C8J_1231
FT                   (CP000814.1) after blastn alignment (97.78 percent identity
FT                   over a 1350 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30721.1"
FT                   /translation="MHEKLTTRFAPSPTGYLHIGGLRTALYNYLYARKNGGNFLLRIED
FT                   TDLKRNSKEATKAIIEAFKWCGLEHDGEVTYQSERFDLYKEYVKKLLDEDKAYYCYMSK
FT                   EELEELRAKQEAVKERPRYDGRYREFKGTPPQGIEPVVRIKAPQSGEIIFEDGIKGEVK
FT                   FKAEDIMDDFIIARSDGTPTYNFTVVIDDALMGVSDVIRGDDHLSNTPKQIVLYEALGF
FT                   KIPKFFHVAMIHGEDGKKLSKRHGATDVMEYKEMGILPQALLNFLVRLGWSHGDDEVFS
FT                   LEDLKKLFDPYHINKSASCYNAKKLEWLNAHYIKTLPFEEINRQLKDLGFDLSVYEKAG
FT                   FLLDLLRERAKTLHDIINGAKSIVNAPQNYDENAVQKFVNENNLELLQAFANTLKDQKT
FT                   GKDFEDFTNDFLEKKEAKLKDLAQPIRIALTGSAVSPSIFEVLEFLGVDECKKRIENFF
FT                   KS"
FT   gene            1341155..1341970
FT                   /locus_tag="C1336_000260133"
FT                   /note="C1336_000260133 identified by Glimmer3 with a raw
FT                   score of 15.47."
FT   CDS             1341155..1341970
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260133"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260133 identified by Glimmer3 with a raw
FT                   score of 15.47. Gene function extrapolated from CJE1481
FT                   (CP000025.1) after blastn alignment (98.73 percent identity
FT                   over a 236 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30722.1"
FT                   /translation="MKKILLSFAFFASLASANTINAIAVVVDKEPITTYDIDQTMKVLK
FT                   IDRNQALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQ
FT                   SYEQFRANLKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLS
FT                   NNPQTLENIKNTKKTILKPQNASLNTSNADPRLLGLLSQIPVGGFSPVLNGKNGYELYE
FT                   VKSKDGAQTPEYEQVKNEVLNAYVSEQRQNFIQDYFDKLRSKINIEYLR"
FT   gene            complement(1342007..1343338)
FT                   /locus_tag="C1336_000260134"
FT                   /note="C1336_000260134 identified by Glimmer3 with a raw
FT                   score of 12.01."
FT   CDS             complement(1342007..1343338)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260134"
FT                   /product="acetyl-CoA carboxylase, biotin carboxylase"
FT                   /note="C1336_000260134 identified by Glimmer3 with a raw
FT                   score of 12.01. Gene function extrapolated from CJE1482
FT                   (CP000025.1) after blastn alignment (96.10 percent identity
FT                   over a 1332 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30723.1"
FT                   /translation="MEIKSILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLKY
FT                   ADASICIGKARSSESYLNIPAIITAAEIAEADAIFPGYGFLSENQNFVEICAKHNIKFI
FT                   GPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSDGALAGAEAAKKLAKEIGYPVILKAAAG
FT                   GGGRGMRVVENEKDLEKAYWSAESEAMTAFGDGTMYMEKYIQNPRHIEVQVIGDSFGNV
FT                   IHVGERDCSMQRRHQKLIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFEFLVDK
FT                   NLDFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAEGYALPFQESIKLNGHSIECRIT
FT                   AEDSKTFLPSPGKITKYIPPAGRNVRMESHCYQDYSVPPYYDSMIGKLVVWAEDRNKAI
FT                   AKMKVALDELLISGIKTTKEFHLSMMENPDFINNNYDTNYLARH"
FT   gene            complement(1343340..1343795)
FT                   /locus_tag="C1336_000260135"
FT                   /note="C1336_000260135 identified by Glimmer3 with a raw
FT                   score of 11.20."
FT   CDS             complement(1343340..1343795)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260135"
FT                   /product="acetyl-CoA carboxylase, biotin carboxyl carrier
FT                   protein"
FT                   /note="C1336_000260135 identified by Glimmer3 with a raw
FT                   score of 11.20. Gene function extrapolated from
FT                   JJD26997_0431 (CP000768.1) after blastn alignment (97.37
FT                   percent identity over a 456 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30724.1"
FT                   /translation="MTKEEIKELVNLFAEANISKIKIKEQDGFEIELERDMCCDVPAPV
FT                   CPPVPAPQPINVSVVNEAQPSQNAKSNKPSINSPMVGTFYQAPSPGAAPFVKVGSTVKK
FT                   GDTIAIIEAMKIMNEIEAEFDCRIAEILVADGQPVEFGMPLFAVEKL"
FT   gene            1343940..1344500
FT                   /locus_tag="C1336_000260136"
FT                   /note="C1336_000260136 identified by Glimmer3 with a raw
FT                   score of 13.53."
FT   CDS             1343940..1344500
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260136"
FT                   /product="deoxycytidine triphosphate deaminase, putative"
FT                   /note="C1336_000260136 identified by Glimmer3 with a raw
FT                   score of 13.53. Gene function extrapolated from C8J_1235
FT                   (CP000814.1) after blastn alignment (96.08 percent identity
FT                   over a 561 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30725.1"
FT                   /translation="MGLKADNWIRKMALEYKMIEPFCEANIGKGVISYGLSSYGYDIRV
FT                   GREFKIFTNVNSTVVDPKNFVEENVVDFEGDVCIVPANSFALARTIEYFKMPDDVLAIC
FT                   LGKSTYARCGIIVNVTPFEPGFEGHITIEISNTTPLPAKIYANEGIAQVLFLQGDEKCD
FT                   TTYKDKKGKYQAQTGITLPRILK"
FT   gene            1344550..1345554
FT                   /locus_tag="C1336_000260137"
FT                   /note="C1336_000260137 identified by Glimmer3 with a raw
FT                   score of 11.01."
FT   CDS             1344550..1345554
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260137"
FT                   /product="possible sugar nucleotide epimerase/dehydratase"
FT                   /note="C1336_000260137 identified by Glimmer3 with a raw
FT                   score of 11.01. Gene function extrapolated from C8J_1236
FT                   (CP000814.1) after blastn alignment (96.26 percent identity
FT                   over a 988 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30726.1"
FT                   /translation="MFNKKNILITGGTGSFGKTYTKVLLENYKPNKIIIYSRDELKQFE
FT                   MASVFNAPCMRYFIGDVRDKERLSVAMRDVDFVIHAAAMKHVPIAEYNPMECIKTNIHG
FT                   AQNVIDACFENGVKKCIALSTDKACNPVNLYGATKLASDKLFVAANNIAGNKQTRFGVT
FT                   RYGNVVGSRGSVVPFFKKLISEGAKELPITDTRMTRFWISLEDGVKFVLSNFERMHGGE
FT                   IFIPKIPSMKITDLAHALAPNLSHKIIGIRAGEKLHEIMISSDDSHLTYEFENYYAISP
FT                   SIKLVDKDNDFSINALGEKGQKVKDGFSYSSDNNPLWASEKELLEIINHTEGF"
FT   gene            1345556..1346686
FT                   /locus_tag="C1336_000260138"
FT                   /note="C1336_000260138 identified by Glimmer3 with a raw
FT                   score of 15.02."
FT   CDS             1345556..1346686
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260138"
FT                   /product="putative aminotransferase (DegT family)"
FT                   /note="C1336_000260138 identified by Glimmer3 with a raw
FT                   score of 15.02. Gene function extrapolated from C8J_1237
FT                   (CP000814.1) after blastn alignment (96.46 percent identity
FT                   over a 1131 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30727.1"
FT                   /translation="MLTYSHQNIDQSDIDTLIKALKDEILTGGKKVDEFEEALCEYVGV
FT                   KHACVLNSATSALHLAYTALGVKEKIVLTTPLTFAATANAALMAGAKVEFIDIKNDGNI
FT                   DEKKLEARLLKDSENIGAISVVDFAGNSVEMDEISNLAKKYNIPLIDDASHALGALYKS
FT                   EKVGKKADLSIFSFHPVKPITTFEGGAVVSDNEELVAKIKLLRSHGIIKKRLWDSDMVE
FT                   LGYNYRLSDVACALGINQLKKLDHNLKKREEIASFYDKEFERNPYFSTIKIKDYKKSSR
FT                   HLYPILLFPEFYCQKEELFESLLHAGIGVQVHYKPTYEFSFYKKLLGEIKLQNADNFYK
FT                   AELSIPCHQEMNLKDAKFVKDTLFSILEKVKKGYCG"
FT   gene            1346679..1347987
FT                   /locus_tag="C1336_000260153"
FT                   /note="Features C1336_000260139, C1336_000260140 joined to
FT                   form C1336_000260153 to correct 454 sequencing error
FT                   (C1336_000260139 identified by Glimmer3 with a raw score of
FT                   5.44, C1336_000260140 identified by Glimmer3 with a raw
FT                   score of 10.90)."
FT   CDS             join(1346679..1346822,1346824..1347987)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260153"
FT                   /product="hypothetical protein"
FT                   /note="Features C1336_000260139, C1336_000260140 joined to
FT                   form C1336_000260153 to correct 454 sequencing error
FT                   (C1336_000260139 identified by Glimmer3 with a raw score of
FT                   5.44, C1336_000260140 identified by Glimmer3 with a raw
FT                   score of 10.90). Gene function extrapolated from CJE1487
FT                   (CP000025.1) after blastn alignment (98.95 percent identity
FT                   over a 286 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30728.1"
FT                   /translation="MDKLDFRSQDFSQTGKAMYELACELFPIPRSITGQGFRASLEILN
FT                   KTLGGGIIKFHSIKSGTKVFDWIVPDEWNAKEAYIITPEGEKICDFKKHNLHLLNYSEA
FT                   IDKEIELEELQDHLYSIEEMPDAIPYVTSYYKRRWGFCLTHNERKKLKKGKYKVYIDAK
FT                   HDENGVLDYADFILPSTQNSKDEILISTYLCHPSMANNELSGPVVAIFLAKWLLSLKER
FT                   RYNYRFVIIPETIGSIVYLSKHLEHLKKHVKAGFVLSCLGDDHTYSLIHTPKENTLSDK
FT                   VALHTLKNKENFKAFSFLDRGSDERQYNAPLANLGIVGVCRTRYGDYDGYHNSKDDLNF
FT                   ISEKGLMGGLQSIQEMILNLEINAIYENTIVCEPNLGKRGLYHTLSTANDIPLACNFLA
FT                   YCDGENDIIDIANILNIQAYEFKELLEKIKFYGLVK"
FT                   /artificial_location="low-quality sequence region"
FT   gene            1347984..1348775
FT                   /locus_tag="C1336_000260141"
FT                   /note="C1336_000260141 identified by Glimmer3 with a raw
FT                   score of 6.51."
FT   CDS             1347984..1348775
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260141"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260141 identified by Glimmer3 with a raw
FT                   score of 6.51. Gene function extrapolated from C8J_1239
FT                   (CP000814.1) after blastn alignment (97.03 percent identity
FT                   over a 236 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30729.1"
FT                   /translation="MKYFLEHNGKKYSDKDLINAFYQLGIKRGDILCVHTELFNFGMPL
FT                   LSRNEFLQTILNCFFEVIGKEGTLIMPTFTYSFCKNEIYDKINSKTKMGALNEYFRKQT
FT                   GVKRTNDPIFSFAIKGAKEELFLKDTTSCFGGNCVYEILTKENGKYMTFGGQGHTLTHY
FT                   AEEQFDVFYRYHKIFSGILIDENNISYNKTISYYVRKLDISSEPNLINIINIVNSTKNF
FT                   KKNNFAGDHINIYNAKEYIEILWEKLDINQTILIENYDTIY"
FT   gene            1348806..1349036
FT                   /locus_tag="C1336_000260142"
FT                   /note="C1336_000260142 identified by Glimmer3 with a raw
FT                   score of 14.86."
FT   CDS             1348806..1349036
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260142"
FT                   /product="acyl carrier protein"
FT                   /note="C1336_000260142 identified by Glimmer3 with a raw
FT                   score of 14.86. Gene function extrapolated from
FT                   JJD26997_0424 (CP000768.1) after blastn alignment (96.97
FT                   percent identity over a 231 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30730.1"
FT                   /translation="MEKQFYEILENILETKVDENTNLSMENCKNWTSLAHIDIIMSLEE
FT                   EFEIKFNKEDLSLLKSQNALLEKIQTLKAEK"
FT   gene            1349033..1349926
FT                   /locus_tag="C1336_000260143"
FT                   /note="C1336_000260143 identified by Glimmer3 with a raw
FT                   score of 12.50."
FT   CDS             1349033..1349926
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260143"
FT                   /product="putative SAM domain containing methyltransferase"
FT                   /note="C1336_000260143 identified by Glimmer3 with a raw
FT                   score of 12.50. Gene function extrapolated from Cj1300
FT                   (AL111168.1) after blastn alignment (96.86 percent identity
FT                   over a 892 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30731.1"
FT                   /translation="MKENIEKLFQAIAQKNPIHSKYLKKIEFSQEDEEEFDKLISYYIQ
FT                   DDISIEEQCDCYLLILNDTLEETKFFIENGTYRYSSFDEVKDKVYFNESYMKQYMIGLA
FT                   LSSFVWIAHIKVRKYFSQYLQNFTPKTTYFEIGPGHGEYFARAVKSGKFSAFYGLDISP
FT                   TSCELTQKMVKQQVGGLITKCDFLCQDFFTYDFDKKADLIVIGEVLEHVEKPLEFLKRS
FT                   KELLSDGGEIFTTIPINAPAIDHIYLFSHPDEVKDLIEKSDLKLKTYEYFMANDYSLEK
FT                   ALKFKNAITMAVVLNA"
FT   gene            1349919..1350335
FT                   /locus_tag="C1336_000260144"
FT                   /note="C1336_000260144 identified by Glimmer3 with a raw
FT                   score of 12.52."
FT   CDS             1349919..1350335
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260144"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260144 identified by Glimmer3 with a raw
FT                   score of 12.52. Gene function extrapolated from Cj1301
FT                   (AL111168.1) after blastn alignment (97.36 percent identity
FT                   over a 417 bp alignment). Similar to Cj1301."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30732.1"
FT                   /translation="MLDKTLNLPLHHIGVACKNLEKERECFFKLGFYKEAEFIDKKQGV
FT                   RGEFIIPCNEAFPQYRFELLQNLNDKGPLDSYLKNNTKMYHLAYESKNITQDLILLEQQ
FT                   EGICIVPIMQASYFAKLCFIMMPNRLLIELVELK"
FT   gene            1350332..1351894
FT                   /locus_tag="C1336_000260145"
FT                   /note="C1336_000260145 identified by Glimmer3 with a raw
FT                   score of 15.34."
FT   CDS             1350332..1351894
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260145"
FT                   /product="HAD-superfamily phosphatase, subfamily IIIC"
FT                   /note="C1336_000260145 identified by Glimmer3 with a raw
FT                   score of 15.34. Gene function extrapolated from
FT                   CJJ81176_1318 (CP000538.1) after blastn alignment (98.59
FT                   percent identity over a 71 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30733.1"
FT                   /translation="MNLFSPHLKRNELIKFAKELDFSKSQDLLINIHRNHAFEGVQSII
FT                   APFLHFDNLRAEFNFSSYDDSLSFDNFKEANLELLWLDLTRYKNNVQNFLEEKLLELRK
FT                   ISQNPILVLSLGEFKTDKKILNCEIFNIEKLIKEYFDEEDILDLAKEELTGSKLNNKAL
FT                   IFLAQILGLSLIPALIKPALKTLVLDLDNTLYQGILGEEGIDNLNLSPLHKTLQEKIKT
FT                   FKKQGFLLALASKNEEKDAKKLFETRKDFILQWDDFDARMINWEPKGENILKIAKKFNI
FT                   NTNAMLFIDDNIAELENTKFTGVKTLLCDENILYKIKLFPNLLKLSNTKEDQIRAKDIA
FT                   ANALREELKSLSDEEYFQNLEISLNFSKNDLQNIPRISELLGKTNQFIANYTRLNQEKV
FT                   AQYMQKELIVSVSMSDKLSDSGIIAIFVFSCKEGNLFIDDLCISCRALGRKLEARMFFK
FT                   AFELALKFFDLKNNNARLYYQKGERNMPFLSFLEQISKEIEKNSALVSFQNLNFKGLII
FT                   HEN"
FT   gene            1351884..1352945
FT                   /locus_tag="C1336_000260146"
FT                   /note="C1336_000260146 identified by Glimmer3 with a raw
FT                   score of 14.24."
FT   CDS             1351884..1352945
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260146"
FT                   /product="putative 3-oxoacyl-(acyl-carrier-protein)
FT                   synthase"
FT                   /note="C1336_000260146 identified by Glimmer3 with a raw
FT                   score of 14.24. Gene function extrapolated from
FT                   JJD26997_0420 (CP000768.1) after blastn alignment (97.46
FT                   percent identity over a 1062 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30734.1"
FT                   /translation="MKTKFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKV
FT                   IGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDTLIVITQSPDFFMPSTACYLH
FT                   QLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGKILLICGDTLSKFIHPKNMNLA
FT                   PIFGDGVSATLIEKTDCNEAFFELGSDGGHFDKLIIPKGAMRIPKADIFNDDSLMQTEE
FT                   FRQLENLYMDGANIFNMALECEPKSFKEILEFSKVEEKDIAFHLFHQSNAYLVDCIKEE
FT                   LKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEFKASLSAFGAGLSWGSAVLNFKD
FT                   LYTKDILIYTKEK"
FT   gene            1352945..1353166
FT                   /locus_tag="C1336_000260147"
FT                   /note="C1336_000260147 identified by Glimmer3 with a raw
FT                   score of 17.27."
FT   CDS             1352945..1353166
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260147"
FT                   /product="acyl carrier protein, putative"
FT                   /note="C1336_000260147 identified by Glimmer3 with a raw
FT                   score of 17.27. Gene function extrapolated from
FT                   CJJ81176_1320 (CP000538.1) after blastn alignment (97.30
FT                   percent identity over a 222 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30735.1"
FT                   /translation="MTKTEFLEELKEAMHRDEDLNEDMLLDDIDEWDSLAFVSVMVLYK
FT                   NLFALKITAEDLKNCQKVSDLIDLAKLD"
FT   gene            complement(1353180..1353542)
FT                   /locus_tag="C1336_000260148"
FT                   /note="C1336_000260148 identified by Glimmer3 with a raw
FT                   score of 13.15."
FT   CDS             complement(1353180..1353542)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260148"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000260148 identified by Glimmer3 with a raw
FT                   score of 13.15. Gene function extrapolated from
FT                   CJJ81176_1321 (CP000538.1) after blastn alignment (98.10
FT                   percent identity over a 211 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30736.1"
FT                   /translation="MILQSQKNKNIIYVSYHSKEDPLTPANFKEQTMQILKILGYDVSL
FT                   NLIDENKIDGKFIKNLDHGCGIPDKVLFRKELPLMLEKLQKRKSLMQENSISYPCGNKV
FT                   FIFKDVGDKFELEIKD"
FT   gene            complement(1353629..1354389)
FT                   /locus_tag="C1336_000260154"
FT                   /note="Features C1336_000260149, C1336_000260150 joined to
FT                   form C1336_000260154 to correct 454 sequencing error
FT                   (C1336_000260149 identified by Glimmer3 with a raw score of
FT                   6.04, C1336_000260150 identified by Glimmer3 with a raw
FT                   score of 8.56)."
FT   CDS             complement(join(1353629..1353805,1353805..1354389))
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000260154"
FT                   /product="hypothetical protein"
FT                   /note="Features C1336_000260149, C1336_000260150 joined to
FT                   form C1336_000260154 to correct 454 sequencing error
FT                   (C1336_000260149 identified by Glimmer3 with a raw score of
FT                   6.04, C1336_000260150 identified by Glimmer3 with a raw
FT                   score of 8.56). Gene function extrapolated from Cj1305c
FT                   (AL111168.1) after blastn alignment (96.48 percent identity
FT                   over a 711 bp alignment). Similar to Cj1305c (617 family)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30737.1"
FT                   /translation="MLINQTFEIDSCDDVELNIKRTSKLEYRISYDNEKEMKAIVFVIG
FT                   GFGANTNIYFLDSYRNYIAKNFDVVTINVFYHCFCQRRSDVEKYSAYKYFQEEDIENIK
FT                   NLLNQFHFSYGEINNDNALFLANSLVKHVENLKMQNKLDHNFKLNFTSTFIPPNGDYQN
FT                   YGIMAAIDHINALKDLAKRFPKFADLPKIYGGGSYGGYLSLLIAKIAPWYVDGVIDNSG
FT                   SALPPLNYILGREMEKAEFYEDFPHNRIIFF"
FT                   /artificial_location="low-quality sequence region"
FT   gap             1355434..1356036
FT                   /estimated_length=603
FT   gene            1356954..1357190
FT                   /locus_tag="C1336_000270000"
FT                   /note="C1336_000270000 identified by Glimmer3 with a raw
FT                   score of 8.44."
FT   CDS             1356954..1357190
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270000 identified by Glimmer3 with a raw
FT                   score of 8.44. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30568.1"
FT                   /translation="MIISIQTIQSIFNNIERTDVNENMQNLIEDDIIDSIDIMKLIIEI
FT                   EKIFNKPLKSKYITPDNFKNFQNIKNMLQEAME"
FT   gene            complement(1357204..1357953)
FT                   /locus_tag="C1336_000270001"
FT                   /note="C1336_000270001 identified by Glimmer3 with a raw
FT                   score of 8.15."
FT   CDS             complement(1357204..1357953)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270001 identified by Glimmer3 with a raw
FT                   score of 8.15. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30569.1"
FT                   /translation="MDNFFDILHDKEFIFAPKCYMTCNGGCCHNIYAKYFRFNTSNDVV
FT                   LPMIEAEYLSLIKAGNNNFENYSKVAYNLKNNKKLVVYYVKCSLGGICNPHNLRPLICK
FT                   LYPYYPKVDFDGNFLGVKPCALFDIFYKNKKNSFCTITHNTEEEFLNLFNKSTKILQRE
FT                   PIMIFIFKTLEYIEEALKKYTYDYYGKEVYLDEMTEDEKYEFFSIQELNSMTLEAYKNN
FT                   DFINKVQNLYDILEKKYNNRFSKYFVE"
FT   gene            complement(1357962..1359173)
FT                   /locus_tag="C1336_000270002"
FT                   /note="C1336_000270002 identified by Glimmer3 with a raw
FT                   score of 9.20."
FT   CDS             complement(1357962..1359173)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270002 identified by Glimmer3 with a raw
FT                   score of 9.20. Gene function extrapolated from CJE1495
FT                   (CP000025.1) after blastn alignment (96.15 percent identity
FT                   over a 104 bp alignment) - for clarity, the original
FT                   product name 'conserved domain protein' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30570.1"
FT                   /translation="MLINQTFEIDSCDDVELGIKRTSKLEYRISYDNEKDIKAIVFMIG
FT                   SYGTNMNMSIMDFDRHYIAQKFDAVVINVVYWCFGVRMGVDIDYSAQLEIQDKDLIHLK
FT                   KTLEKHGLETFGLNANTAKVFIQKLDLKINALKLCNKQKDDYRAIITGTLIPPNNEYQN
FT                   YGIMAAIDHINALKDLVKRFPKFADLPKIYGGVSYGGYLSLLIAKIAPWHVDAIIDNSG
FT                   EALLLLQYIIGRDLNQCEFIIYENNIQYNCFLKTHWNTNSESIYCFKTENYVIRALLNA
FT                   AHLQIQVQKNKEITYVSYHSSADLMSSVEDKIKLIQAYKALGYEVEFNLIDNKNIDGKF
FT                   IKNFNHGGGIAIKALFKKELPKLIRRLYGKNFKFKQDIINYPCGDKNFIFKDKDDKFEL
FT                   EITN"
FT   gene            1359253..1359951
FT                   /locus_tag="C1336_000270003"
FT                   /note="C1336_000270003 identified by Glimmer3 with a raw
FT                   score of 11.84."
FT   CDS             1359253..1359951
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270003"
FT                   /product="acylneuraminate cytidylyltransferase"
FT                   /note="C1336_000270003 identified by Glimmer3 with a raw
FT                   score of 11.84. Gene function extrapolated from C8J_1244
FT                   (CP000814.1) after blastn alignment (96.28 percent identity
FT                   over a 699 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30571.1"
FT                   /translation="MKNLCIIPARGGSKRIPRKNIIDFLGKPLIAYSIENALNSGIFDE
FT                   VILSSDDEEIIEVALKYGAKAPFIRDKKLSDDYTSSTAVVQNAIEILQSQNKIYDHVCC
FT                   LYATAPLLNKDILKQAYEKFIQNQSKFLFAATEFEYPIQRAFYLNENNQVYMFDEKHYK
FT                   SRSQDLTKAFHDAGAFYFGTSKAWLEEDFMFKPHSSVFVLPRNLVCDIDTMQDLEFAKI
FT                   LYKVNHESSY"
FT   gene            1359935..1360759
FT                   /locus_tag="C1336_000270004"
FT                   /note="C1336_000270004 identified by Glimmer3 with a raw
FT                   score of 10.38."
FT   CDS             1359935..1360759
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270004"
FT                   /product="nucleotidase specific for PseC
FT                   product,UDP-4-amino-4,6-dideoxy-beta-L-AltNAc"
FT                   /note="C1336_000270004 identified by Glimmer3 with a raw
FT                   score of 10.38. Gene function extrapolated from Cj1312
FT                   (AL111168.1) after blastn alignment (95.27 percent identity
FT                   over a 825 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30572.1"
FT                   /translation="MKVLIRSDSSSQIGFGHIKRDLVLAKQYDDVSFACLPLEGSLIDE
FT                   IPYPVYELSSESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDEIK
FT                   PHHCDILLNVNAYSKASDYEGLVPFKCEVKCGFSYALIREEFYQEAKENREKKYDFFIC
FT                   IGGTDIKNLSLQIASELPKTKIISIATSSSNPNLKKLQKFAKLHSNIRLFIDHENIAKL
FT                   MNESNKLIISASSLVNEALLLKANFKAICYVKNQEPTATWLAKKGYEVEYRY"
FT   gene            1360756..1361229
FT                   /locus_tag="C1336_000270005"
FT                   /note="C1336_000270005 identified by Glimmer3 with a raw
FT                   score of 9.69."
FT   CDS             1360756..1361229
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270005"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270005 identified by Glimmer3 with a raw
FT                   score of 9.69. Gene function extrapolated from C8J_1246
FT                   (CP000814.1) after blastn alignment (95.42 percent identity
FT                   over a 240 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30573.1"
FT                   /translation="MIKLKNFTELNSQEIELIFKWRNNIYISQFMKTKQIDFEEHLRFI
FT                   RNLHQDSNKKYFLVFQDEQIIGVIDFINITTKSCEFGLYAKPDLKGVGQILMNEIIRYA
FT                   FEILKVDTLKAYVFKNNHKALKLYQQNHFTIYDEDKDFYYAYLKQSHCKTLLS"
FT   gene            complement(1361194..1361940)
FT                   /locus_tag="C1336_000270006"
FT                   /note="C1336_000270006 identified by Glimmer3 with a raw
FT                   score of 15.22."
FT   CDS             complement(1361194..1361940)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270006"
FT                   /product="cyclase hisF"
FT                   /note="C1336_000270006 identified by Glimmer3 with a raw
FT                   score of 15.22. Gene function extrapolated from C8J_1248
FT                   (CP000814.1) after blastn alignment (95.72 percent identity
FT                   over a 747 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30574.1"
FT                   /translation="MLKTRIIPCVLLKNSQLVKSIEFKDFRTIGHLTSTMRIYNARNVD
FT                   ELIILDIDASKSGEIDFDSIEDLAKECFMPLTIGGGIKTLEDIQKILNLGADKISINSK
FT                   ALEDMDFISKAANRFGSQCIVCSIDVKRKGDQLCVYDRGNLLEKSPLELALEYEKKGAG
FT                   ELLLTSVDFEGKAKGYDLELLKIFQNKLKIPLIINGGLGNPSDGVKALNLGADALAGAY
FT                   IFHFSKYTPKDVKEELTKQGFAVRLL"
FT   gene            complement(1361941..1362546)
FT                   /locus_tag="C1336_000270007"
FT                   /note="C1336_000270007 identified by Glimmer3 with a raw
FT                   score of 15.19."
FT   CDS             complement(1361941..1362546)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270007"
FT                   /product="imidazole glycerol phosphate synthase, glutamine
FT                   amidotransferase subunit"
FT                   /note="C1336_000270007 identified by Glimmer3 with a raw
FT                   score of 15.19. Gene function extrapolated from C8J_1249
FT                   (CP000814.1) after blastn alignment (95.03 percent identity
FT                   over a 604 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30575.1"
FT                   /translation="MIALIDYKAGNLNSVAKAFEKIGVTNFIAKNPKDLQKADKLLLPG
FT                   VGSFKEAMKNLKELGFIEALKEQVLVQEKPILGICLGMQLFLERGYEGGVCEGLGFIEG
FT                   EVVKFEEDLNLKIPHMGWNELEILKQEPLYQGIEDRSDFYFVHSFYVKCKDEFVSAKAQ
FT                   YGHKFVASLQKDHIFATQFHPEKSQNLGLKLLENFIRL"
FT   gene            complement(1362543..1363457)
FT                   /locus_tag="C1336_000270008"
FT                   /note="C1336_000270008 identified by Glimmer3 with a raw
FT                   score of 11.83."
FT   CDS             complement(1362543..1363457)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270008"
FT                   /product="flagellin modification protein, PseA"
FT                   /note="C1336_000270008 identified by Glimmer3 with a raw
FT                   score of 11.83. Gene function extrapolated from
FT                   CJJ81176_1333 (CP000538.1) after blastn alignment (97.60
FT                   percent identity over a 915 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30576.1"
FT                   /translation="MVKMLELGLNPLCVCFEPSVPTKIGRKNLDNLNHLGVDLIHIKRD
FT                   PKVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPLIIWGESPQIEYGGPASSK
FT                   NKNILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTYPSDEELQKVGVTGLFLGYY
FT                   FKWDYKKILEISKKYGFSTLDHPVETTYENFENLDCYSNHVHDYLKYCKYGFGRATDNA
FT                   CLDIRLGYISREEGVRLVQKYDGKPPKKAIKKYLEFSGFSEEEFQKIVDSFTNKKIFKR
FT                   DENGKFIRDYDGSLVRKDECVLK"
FT   gene            complement(1363529..1363657)
FT                   /locus_tag="C1336_000270009"
FT                   /note="C1336_000270009 identified by Glimmer3 with a raw
FT                   score of 10.51."
FT   CDS             complement(1363529..1363657)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270009"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270009 identified by Glimmer3 with a raw
FT                   score of 10.51. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30577.1"
FT                   /translation="MPDTKPDLHFDEEGICDACRSQEAKKSKKSIGKKGKKNFLSL"
FT   gene            1363794..1364945
FT                   /locus_tag="C1336_000270010"
FT                   /note="C1336_000270010 identified by Glimmer3 with a raw
FT                   score of 10.93."
FT   CDS             1363794..1364945
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270010"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270010 identified by Glimmer3 with a raw
FT                   score of 10.93. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30578.1"
FT                   /translation="MKNKHFFIIGGGDLQADLVLHAKKDFITHVFDYNENCFCKDLADY
FT                   FHPISIADKEKILELAIKFNIVGIATAATELGNLTVCYIGEKLNLGTNSYECAKNTTDK
FT                   SLMKKVFERNNINHAKYFILKDEKDLEQIANFPVVVKPSDRSAGRGVVKVFDKENLKKY
FT                   FYKAKDFSYNKIVLAEEVLKGRQFSVETISSHGKHQIIAITEEYLREGEFANDFLETQH
FT                   LIPARITHHEKKIIQNEIIKVLNAFKINFGASHIEIKLHNNIVKIIEIASRMGGWRDVL
FT                   AYHSYGIDYLQLLIQSSLKQELKKVNTKAKNFCLVKMIFTKEDYLFYKKIKSLYPEFII
FT                   KEKIHFNNVENFDYSSSLMDSKGYYYIKIKLNEDINVFLLNKI"
FT   gene            complement(1364931..1365428)
FT                   /locus_tag="C1336_000270011"
FT                   /note="C1336_000270011 identified by Glimmer3 with a raw
FT                   score of 10.71."
FT   CDS             complement(1364931..1365428)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270011"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270011 identified by Glimmer3 with a raw
FT                   score of 10.71. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30579.1"
FT                   /translation="MSGVLVYITGLSGSGKTTLAKELQKELILQNIYPILLDGDELRAC
FT                   INNANYDIKNRMEMAMFYVKIAKMLYNQGFIVILSTISMFDSIREFNRNSFQNYLEIFL
FT                   DVSFEIRKKRDSKKFFKNKIENMAGIDQILELPKKSHIVLKDDFDINNAKILIINKILN
FT                   FV"
FT   gene            complement(1365413..1366504)
FT                   /locus_tag="C1336_000270012"
FT                   /note="C1336_000270012 identified by Glimmer3 with a raw
FT                   score of 8.23."
FT   CDS             complement(1365413..1366504)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270012"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270012 identified by Glimmer3 with a raw
FT                   score of 8.23. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30580.1"
FT                   /translation="MINSEKFASFLQDRFSFIAGVPDSLLKYINQALEKKFRENFHICA
FT                   NEGQAVAFGIAYNLATSKIPLIYMQNSGIGHALNPLLSLADKTVYQIPLILFIGLRGGV
FT                   DDEPQHLKHGEISKKILKICGIKTLYLSQNIAVAKKQINKAIEQSFNDKKIIAFLIKKN
FT                   TFSKYSNNDIKNNNFAILREEAIALIQDIFQDSKFVTTTGMISRECYELRKNKNQTHEN
FT                   DFLVVGSMGHANSLAFILSRYSKKRIVCLDGDGALIMHMGGILNFKGASFLHIVFNNEM
FT                   HDSVGGQRTHISNTNLKKMLKICGYDYSYSVATITQLKRILKNIKKQKGLIFLEIKVKR
FT                   QTRDNLGRPKNLLHLKEIFCREF"
FT   gene            complement(1366501..1367811)
FT                   /locus_tag="C1336_000270013"
FT                   /note="C1336_000270013 identified by Glimmer3 with a raw
FT                   score of 10.97."
FT   CDS             complement(1366501..1367811)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270013"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270013 identified by Glimmer3 with a raw
FT                   score of 10.97. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30581.1"
FT                   /translation="MNKKLVYVPMAADIIHPGHLNIIKEAQKLGYVMVGLFSDQAIASY
FT                   KRVPFMNFEQRKQLIESIKGVDEVVIQNEKDYDNNLLKYKPDFMVHGSDWNEGPLNSSR
FT                   KKAIDLMKTWGGKVIEPQYTPNISSTKLNKNLKQFGILPQNRLGSLRKCMNAKSLIRGI
FT                   ESHSGISALAIENTFYKDENGINQEFDFLWLSSLTDSSSKGKPDIEFVDLTSRIATVND
FT                   ILEVSTKPIIYDGDTGSQIPHFTFMVKRLERLGVSAVVIEDKIGLKKNSLCEGNDIKHT
FT                   QDSIENFCLKIQAGKKAQLSEEFMIIARIESLILNQGMNDAISRARAYIDAGADGIMIH
FT                   SRKKDGCEIIEFCKKYNTFKDRKPLMVVPTNYPSLGEKKLQEAGVNIVVYANQLLRSAY
FT                   TAMQNTALSILKNKSSAEADKDYISALDLINLIKGNE"
FT   gene            complement(1367817..1368227)
FT                   /locus_tag="C1336_000270014"
FT                   /note="C1336_000270014 identified by Glimmer3 with a raw
FT                   score of 11.81."
FT   CDS             complement(1367817..1368227)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270014"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270014 identified by Glimmer3 with a raw
FT                   score of 11.81. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30582.1"
FT                   /translation="MGQELPIVRVSFLLQEKNKHELEDFKNYWVDKVDYVSVQRYVPIS
FT                   PFDDERSIAISDAPIAGKQCCSYPFESLFIHGDGLVVPCASHRAKHIAVGNINTDNIYN
FT                   IWHSQAMEDLREAHRNGDLSKTKLCDTCLFKG"
FT   gene            complement(1368287..1368826)
FT                   /locus_tag="C1336_000270015"
FT                   /note="C1336_000270015 identified by Glimmer3 with a raw
FT                   score of 8.59."
FT   CDS             complement(1368287..1368826)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270015"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270015 identified by Glimmer3 with a raw
FT                   score of 8.59. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30583.1"
FT                   /translation="MGEIKAESTSAGRVVNNSKKDIDAIFVKYYGQKWLDYRKKWSDAS
FT                   KQILNDFPLFVRFENQFKCNARCIMCVHGHADLRNDYYYNGYLPIETFKRLVDECDAYK
FT                   CPSVGMSQTNEPLLDPDIIERICYVSKKDSIMDIHFNTNASLLDEEMSKKLLDTKITRM
FT                   NFSIDAFTEETYKKLG"
FT   gene            complement(1368813..1369505)
FT                   /locus_tag="C1336_000270016"
FT                   /note="C1336_000270016 identified by Glimmer3 with a raw
FT                   score of 4.65."
FT   CDS             complement(1368813..1369505)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270016"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270016 identified by Glimmer3 with a raw
FT                   score of 4.65. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30584.1"
FT                   /translation="MNLDERLKKRQRNEVKSMYIIEYFYRIILARRYLPFLAKINIHPI
FT                   AITALNTIIFPITLYFLYFEYFLVSAILIQIYALIDHTDGMLARYTNKQTYIGSRLDRF
FT                   NDNVFFNAIFIFIALGANLPLYLAFMTIICMNIHNAFGMFYFSKKLRSLKKIRRFGIKK
FT                   WFLDRNFILGIDCSLMLTLVSLFLIIDEVFLLFYIVSFLYLLDVIYRFIELKRNQNLDF
FT                   KEKCNGRN"
FT   gene            complement(1369517..1370176)
FT                   /locus_tag="C1336_000270017"
FT                   /note="C1336_000270017 identified by Glimmer3 with a raw
FT                   score of 13.99."
FT   CDS             complement(1369517..1370176)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270017"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270017 identified by Glimmer3 with a raw
FT                   score of 13.99. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30585.1"
FT                   /translation="MIQQKWHELHADKRHQPRYPSNDLVSFVFRNFKLGDKILDLGCGA
FT                   GRHVKFLAENGFKAFGVDYSENGIKAAQELLKTYNLQADLKVSSVDDIPYEDESFDGLL
FT                   CYGVLYYNSKEVIEKAAKEIYRVLKKGSMSYVAVRNMDDYRYKNNEKKSKYEVIIQESD
FT                   KNRSASCEDGMQMYFFDKDEVQRIFKDFKNIEINRLKTSYANDSFADESFLIILKK"
FT   gene            complement(1370189..1371208)
FT                   /locus_tag="C1336_000270018"
FT                   /note="C1336_000270018 identified by Glimmer3 with a raw
FT                   score of 9.77."
FT   CDS             complement(1370189..1371208)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270018"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270018 identified by Glimmer3 with a raw
FT                   score of 9.77. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30586.1"
FT                   /translation="MDLCEIEKLLSFKFNHENLLYTGSGTSALYLIFSYLKKQGKSKIA
FT                   IPSLVCPQVSCAAFKAGCELVFIDVSLCNYTLDYESCVALYAKYSYDALVLVHLYGHFC
FT                   DERIWKFCLENDIFIIEDCAQTYKIDFRAHASILSFGHTKFLENNSWGGVIFVYSKEIL
FT                   QDLYIMNEHLEFKDFKIFFEEYRQKYYALDSKDLHYFSKLKSLLLDYTLVFKAQNYGNL
FT                   KTKLNNLEMICKNRREKMQIYQENLVHRDIIHPKLSHNCISWRYTFRYLGAREKLLERL
FT                   RLLRIDCSSWYIPSHRIFQSKILKNAEILSHQLINLWLDEKISKKEIFKNVDIIMQNL"
FT   gene            1371280..1372311
FT                   /locus_tag="C1336_000270019"
FT                   /note="C1336_000270019 identified by Glimmer3 with a raw
FT                   score of 14.50."
FT   CDS             1371280..1372311
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270019"
FT                   /product="N-acetylneuraminic acid synthetase"
FT                   /note="C1336_000270019 identified by Glimmer3 with a raw
FT                   score of 14.50. Gene function extrapolated from
FT                   JJD26997_0397 (CP000768.1) after blastn alignment (93.20
FT                   percent identity over a 1014 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30587.1"
FT                   /translation="MQIGNFNTDKKVFIIAELSANHAGSLEMALKSIKAAKKAGADAIK
FT                   IQTYTADSLTLNSDKEDFIIKGGLWDKRKLYELYESAKTPYEWHSQIFETAQNEGILCF
FT                   SSPFAKEDVEFLKRFDPIVYKIASFEANDENFVRLIAKEKKPTIVSTGIATEGELFRIC
FT                   EIFKEEKNPDLIFLKCTSAYPAAIEDMNLKAMVNLKEKFNVEVGLSDHSFGSLAPIIAV
FT                   SLGARVIEKHFMLDKSIESEDSKFSLDFNEFKAMVDAVRQAESALGNGKLDLDEKVFKN
FT                   RVFARSLYASKDIKKGEIFSEENVKSVRPSFGLHPKFYQEILGKKATKDIEFGDALKES
FT                   DFR"
FT   gene            1372308..1374167
FT                   /locus_tag="C1336_000270020"
FT                   /note="C1336_000270020 identified by Glimmer3 with a raw
FT                   score of 11.72."
FT   CDS             1372308..1374167
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270020"
FT                   /product="motility accessory factor"
FT                   /note="C1336_000270020 identified by Glimmer3 with a raw
FT                   score of 11.72. Gene function extrapolated from
FT                   CJJ81176_1335 (CP000538.1) after blastn alignment (94.43
FT                   percent identity over a 323 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30588.1"
FT                   /translation="MNQNLFLKNTQALFEVDQILAYKLRALKKNDFKIQQNENGINFIK
FT                   DNITLYKNPNQELLENLTLFQNKYKKYPVLFFYGFGNGMFYKALCENKNHKHIIVFEDE
FT                   LEILALALHLFDFSKELKNEKLILFHTTSITTAQLTTLFMYECIQKSVKIFNLFIHSDF
FT                   YLKFYTHQIQELNKKLIENIRFIVLAKGNDPYDSIIGIKHMLNNLPKLLNHGIFQNFLK
FT                   ERKQKVKNAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLER
FT                   DDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVHRPLHFAVSLNLKE
FT                   FGYIGVGASVANMAYELAASLRHENIIFIGQDLAYAEDGSSHPREHIYGNEGEKIRGEV
FT                   YTLAYGGEKQVRTQLTWNLFRQAFEKDIFWAKEKLKINTYNCTEGGARIEGTIEKPLKE
FT                   TCEALLKEELKKPFDRPKILEKNEIKNKFLQTQKLLIKNVEQSEKFIKKCQNELKKLDF
FT                   ELSKSQLNLQTLIKIKQNLLIFFKDFKRLKLFNELTQAIYYHNECEIMHYEVLNDLEQN
FT                   EKIKDFLTSQKTWWLQSFEYLNTQNQIIKEALKKYKNDDIFIK"
FT   gene            1374177..1376138
FT                   /locus_tag="C1336_000270021"
FT                   /note="C1336_000270021 identified by Glimmer3 with a raw
FT                   score of 12.87."
FT   CDS             1374177..1376138
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270021"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000270021 identified by Glimmer3 with a raw
FT                   score of 12.87. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30589.1"
FT                   /translation="MKFNQNQTILFNKNLDSLNNPTLKEKLKELSITHYELILGKDNLD
FT                   INLKDTKNHTFLYKDTIKELDIMLKTYNEKYLLYPVLYFYGFGNGILFKALLKNKYHKH
FT                   LVIFEKELEILKIILHLIDFSQELKENKLLILDVNSLEFQDYYDLCSTNPFFSFSRTYF
FT                   LELSSNYYEKDQEEILNLNNNLMKNFKNAILKNGNDSKDALQGIEQLIYNLPVLLTHAP
FT                   YQNLLKQRANLSDTAIIVSTGPSLSKQLNTLKQYANKATIIAADASYPILAKHDIKPDY
FT                   VLSLERILSTSKFFDNNFGDFDKDILFITTHLTHPQTIKNLENNNRNFMLSYRGTYFMK
FT                   YLQLNSFGNLVEGHSVANIAYGLAVFLKHKNIIFIGQDLAYAEDGSSHPSEHIYGNYDA
FT                   VDKNKITYHLKTLAYGGKKMVYTKEGWNLFRHTLEKHIFQTKQLKLCTTYNCTEGGARI
FT                   EEAIEKPFKEICETLLKEDLKKPFPKVEALNKDKQDELLLKSYYKIYKSIKHCKDFSDE
FT                   LLKSYKHILESFSNLNLISNLNEGKEILDYLLQEIDKIKTKLEDGKNMLDLYEILGPLL
FT                   TQFELNLARIYVLNPKTLEDSYNKSLLWVKEHIEFFDMVYEHIKAQEKALIENITPLEN
FT                   ELMQRNLEKYKRKIKNAK"
FT   gene            1376128..1378026
FT                   /locus_tag="C1336_000270022"
FT                   /note="C1336_000270022 identified by Glimmer3 with a raw
FT                   score of 12.66."
FT   CDS             1376128..1378026
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000270022"
FT                   /product="PseE protein"
FT                   /note="C1336_000270022 identified by Glimmer3 with a raw
FT                   score of 12.66. Gene function extrapolated from Cj1337
FT                   (AL111168.1) after blastn alignment (89.83 percent identity
FT                   over a 118 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30590.1"
FT                   /translation="MQNEIFDKNIKAMGGKEYDELKEKLVKIKELREFSYTFGKDNLDI
FT                   NIIQKRNLKTIYKNPLKELEEKIEFFKDYKRYPALFFYGLGNGILYKALLQNENHKRIV
FT                   VFEKEIEIIFIVLNLLDFSEDLRKGRLILIYTSYMNYTKADSIFSLKEINRFFKTYNLH
FT                   LHSNFYKNYKEDILKINTLNLKAIKNISLRHGTDPKDAMQGIEQFVRNIPKMINHPSYQ
FT                   TLLKKRKNTKNENVAIIVSTGPSLEKQLPLLKQYANKATIFCADSAYAILAKHNIKPDY
FT                   VCMMERDEIVAECFNNDFGNFDKDIIFIVASLVHKKTLSHLDKNKRTYILVTRFLPFAN
FT                   SIDLKEFGYIGGGLSVAHMNYELAINLNYKNIILIGQDLAYAKDGDSHSKGFIHEKLHD
FT                   GHYQRDFDKYITTAYGGKGTVQSSEIWTIFREIFENSIKKNKEIIKTYNCTEGGARIEG
FT                   AIEKPFEEICKTLPKKDLKKPFAKIPKLSKNQRDKLMLKAYKNIKKQMSLTQTFLKECK
FT                   KAKNQLASLKRGKTKLTLEQINQNLDKFKTRLDLKRYNFLHEILGPTLYHEESLLTPLY
FT                   TQNFTNESEKQNKLFAWLYAHESLIENIYDLINTQNIILKKAIIPLQDELEKRNLI"
FT   gap             1378259..1379024
FT                   /estimated_length=766
FT   gap             1380222..1380748
FT                   /estimated_length=527
FT   gene            complement(1381671..1383497)
FT                   /locus_tag="C1336_000290000"
FT                   /note="C1336_000290000 identified by Glimmer3 with a raw
FT                   score of 10.04."
FT   CDS             complement(1381671..1383497)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290000 identified by Glimmer3 with a raw
FT                   score of 10.04. Gene function extrapolated from C8J_1257
FT                   (CP000814.1) after blastn alignment (98.65 percent identity
FT                   over a 370 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30493.1"
FT                   /translation="MTILEKNIQALLSGVNEPLGNKLLNFIQNKTCSRFNIDENLNIYD
FT                   KTHNVFMYENLEEELNFFYQSILEKTPRYPFICIYGIGNALLIKNLAKHYKHLFVFESE
FT                   IELFILALSTIDLSEELCSGKIYLVDVEEEKVNIQLSILFDQKDMFEYLSLYEMFINSS
FT                   YYEKYFMDDIIKIDHIVYDNINLVIRNLDPECKLSLICYDNFIQNIPLMLKSIPFQRII
FT                   QERKNKFENCIVVCAGPSLEKQIPLLKKYQENFVIFCADGAFPLLYKNDIIPDYILNVD
FT                   FQEYPIEFFKDIEKEKLSKSLILLASSTHSKVVSYLENNFHISLFLSRDALYQHINIPS
FT                   FGYLETGTHVGHTCYTLALALKFKNVIIIGQDLAYSLDGNTHFSDFKYQSNFEKNKDFK
FT                   FEVSAYGGKDKIATRITWNDYRKKLEILFANNTQVNFYNATEGGAKIAFTKELNFEQCC
FT                   LKFASQKEKSLKIPQILTSNRNEKLYKKVLEILKEDLNNINEILDNAKFLDNALEKILL
FT                   SEKKLPLEFLHQCHKNIQFFNSFLENSFIFKDGVLKGIFFKRGFELSKIIIQKIQKEEN
FT                   YLYLIVKVYKDWLILLIEKLNVRKQSLEKLFL"
FT   gene            complement(1383509..1384750)
FT                   /locus_tag="C1336_000290001"
FT                   /note="C1336_000290001 identified by Glimmer3 with a raw
FT                   score of 10.43."
FT   CDS             complement(1383509..1384750)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290001 identified by Glimmer3 with a raw
FT                   score of 10.43. Gene function extrapolated from
FT                   CJJ81176_1341 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 84 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30494.1"
FT                   /translation="MIVSKTYEIDSCDDVELDIKRELKLEFKLWYDDEKTPEALVFVVQ
FT                   GMGDDISSIQYVGDYMVRQFNTAVVGVNYHCIGNRPQTGSTFYLDDIDKLILKASCETA
FT                   DIKLPYDVDKIQDYKQMSEIFHFVNNQIIEGKQKGNFTPNYFLNLHVSLQPAKNEYQNF
FT                   GIMQAQDLLNVTLYLKKHAPFDTMGGGIPVIMIGSSHGGYLAHLAAKIAPWLVDGVLDN
FT                   SAYAKFLWRVVGFGKEIDFMQYSEFATFDFFHHIKTHCSTKTFWTSNSSSPRFFSPARR
FT                   KIRNLLEEDHLLEQSKCLKTCFVSYHSLYDEYVSLKEKTMLYEELEKLGFDATLCSITK
FT                   ESQVDGKFIKNLNHGMGIPVKLLIKKELPLMLEKIKQNLKKDCKEKYISYPCEDLLYQF
FT                   SEKDDKILLKIDKI"
FT   gene            complement(1384750..1385265)
FT                   /locus_tag="C1336_000290002"
FT                   /note="C1336_000290002 identified by Glimmer3 with a raw
FT                   score of 14.57."
FT   CDS             complement(1384750..1385265)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290002"
FT                   /product="transformation system protein"
FT                   /note="C1336_000290002 identified by Glimmer3 with a raw
FT                   score of 14.57. Gene function extrapolated from CJE1532
FT                   (CP000025.1) after blastn alignment (97.48 percent identity
FT                   over a 516 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30495.1"
FT                   /translation="MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLK
FT                   TLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGNFNGIKEVNFRVGDEKECLKLVFIN
FT                   KADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNLASK
FT                   TYLLIGGM"
FT   gene            complement(1385266..1386273)
FT                   /locus_tag="C1336_000290003"
FT                   /note="C1336_000290003 identified by Glimmer3 with a raw
FT                   score of 16.70."
FT   CDS             complement(1385266..1386273)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290003"
FT                   /product="O-sialoglycoprotein endopeptidase"
FT                   /note="C1336_000290003 identified by Glimmer3 with a raw
FT                   score of 16.70. Gene function extrapolated from
FT                   CJJ81176_1343 (CP000538.1) after blastn alignment (97.75
FT                   percent identity over a 222 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30496.1"
FT                   /translation="MKNLILAIESSCDDSSIAIIDKNTLECKFHKKISQELEHSIYGGV
FT                   VPELAARLHSEALPKILKQCKEHFKNLCAIAVTNEPGLSVSLLSGISMAKTLASALNLP
FT                   LIPINHLKGHIYSLFLEEKISLDMGILLVSGGHTMVLYLQDDASLELVASTNDDSFGES
FT                   FDKVAKMMNLGYPGGVIIENLAKNAKLKNISFNIPLKHSKELAYSFSGLKNAVRLEILK
FT                   HENLSDDIKAEIAYAFENTACDHIMDKLEKIFNLYKFKNFGVVGGASANLNLRSRLQNL
FT                   CQKCNTNLKLAPLKFCSDNALMIARAAVDAYEKKEFVSIEEDILSPKNKNFSRI"
FT   gene            complement(1386270..1387664)
FT                   /locus_tag="C1336_000290004"
FT                   /note="C1336_000290004 identified by Glimmer3 with a raw
FT                   score of 14.32."
FT   CDS             complement(1386270..1387664)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290004 identified by Glimmer3 with a raw
FT                   score of 14.32. Gene function extrapolated from CJE1534
FT                   (CP000025.1) after blastn alignment (96.81 percent identity
FT                   over a 1347 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30497.1"
FT                   /translation="MKFFLIILFFITSIFALELDFSVGENGKSLDDNNTVLIFGGIQGD
FT                   EPGGFHAASLLLSDYNITKGKIIVAPNLAFDSIIKRSRGNNGDLNRKFASISPKDPDYK
FT                   RVQRIKELILLPEVSMVINLHDGWGFYKPTYIDAMQNPKRWGNSSVIDTSEINASKYPD
FT                   LENIATQTVNSVNSSLADPKHAYHLKNTKTQELGDTEMLKALTYFVISNHKAAFANEAS
FT                   KNLPVNLRAYYHLLAIENYLKTAGIEFSRDFELTPQGVDKAINKELEVKLFDDRILLSL
FT                   KNPRKVINYVPFPVNKELNYNTSNELTAVIAEGNSFYIQYGNRFQTRLYPEYLEFSDAF
FT                   NEVTFQVDGNETTASFGSKVKVKENFLIPKIANVRVNIIGFDHGKDESGILVHKKNMQT
FT                   QYSLDMAGKIYRVEFYELRGANLQQLLEANINSKLIKNAKNLDLNTLKMARSKDKFLGS
FT                   ILVEFE"
FT   gene            complement(1387666..1388736)
FT                   /locus_tag="C1336_000290005"
FT                   /note="C1336_000290005 identified by Glimmer3 with a raw
FT                   score of 12.75."
FT   CDS             complement(1387666..1388736)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290005"
FT                   /product="putative 1-deoxy-D-xylulose 5-phosphate
FT                   reductoisomerase"
FT                   /note="C1336_000290005 identified by Glimmer3 with a raw
FT                   score of 12.75. Gene function extrapolated from C8J_1262
FT                   (CP000814.1) after blastn alignment (97.11 percent identity
FT                   over a 1071 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30498.1"
FT                   /translation="MILFGSTGSIGVNALKLAALKNIPISALACGDNIALLNEQIARFK
FT                   PKFVAIKDSKNKHLVKHDRVFIGQEGLEQILTECQDKLLLNAIVGFAGLKSTLKAKELG
FT                   KNIALANKESLVVAGSFLKGAKFLPVDSEHAALKFLLEGKKNIAKLYITASGGAFYKYK
FT                   IKDLNQVSVKDALKHPNWNMGAKITIDSATMANKLFEIIEAYHLYDFKEIDALIEPRSL
FT                   VHAMCEFKNGASTAYFSKADMKLAISDAIFEKQDTPILEAVDFSKMPALKFHKISTKKY
FT                   PIFKLKNAFLKEPNLGVIINAANEVGVYNFLENKSRFLDIAKCIFKALDHFGVPKISSI
FT                   EEVFEYDFKTREYLRS"
FT   gene            complement(1388733..1389458)
FT                   /locus_tag="C1336_000290006"
FT                   /note="C1336_000290006 identified by Glimmer3 with a raw
FT                   score of 14.74."
FT   CDS             complement(1388733..1389458)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290006"
FT                   /product="phosphatidate cytidylyltransferase"
FT                   /note="C1336_000290006 identified by Glimmer3 with a raw
FT                   score of 14.74. Gene function extrapolated from C8J_1263
FT                   (CP000814.1) after blastn alignment (98.40 percent identity
FT                   over a 376 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30499.1"
FT                   /translation="MFNTTRIISALVMIGAIIIIALIDQFFINFIVFAVLLYLSFSEAK
FT                   KLFVLENISIIPLAIAFILGSLSHKALFFGILALLLVVGYLVYKKASLKPALIYIYPSL
FT                   PILALWQVYLDQGMFALFWLIIIVAACDSGAYFIGKLMGKTPFSPTSPNKTLEGVIGGL
FT                   ICASIIGTILGVFVYSFWLSLLCSFFVAIFAVIGDLLESYFKREVGVKDSGDLIPGHGG
FT                   VLDRIDAVIIAAFVMVALL"
FT   gene            complement(1389467..1389805)
FT                   /locus_tag="C1336_000290007"
FT                   /note="C1336_000290007 identified by Glimmer3 with a raw
FT                   score of 18.49."
FT   CDS             complement(1389467..1389805)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290007"
FT                   /product="putative coiled-coil protein"
FT                   /note="C1336_000290007 identified by Glimmer3 with a raw
FT                   score of 18.49. Gene function extrapolated from C8J_1264
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 127 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30500.1"
FT                   /translation="MPVSPLGNVNYINQNMAYPATQASNELAKEGFAATLNMAEFNEKE
FT                   KTLNKLEKVNETHEIKEEIKEKAEQEEKKKKHNQEAKTSDDEKNEEDESKDPNFKDAQS
FT                   IHRLDISI"
FT   gene            complement(1389807..1391114)
FT                   /locus_tag="C1336_000290008"
FT                   /note="C1336_000290008 identified by Glimmer3 with a raw
FT                   score of 12.42."
FT   CDS             complement(1389807..1391114)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290008"
FT                   /product="fibronectin/fibrinogen binding protein, putative"
FT                   /note="C1336_000290008 identified by Glimmer3 with a raw
FT                   score of 12.42. Gene function extrapolated from
FT                   CJJ81176_1348 (CP000538.1) after blastn alignment (99.00
FT                   percent identity over a 200 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30501.1"
FT                   /translation="MKYTELLQLQTFFSQFKKIDFIKRINDNILELSFDRERFIFDLTR
FT                   AMSAIYTAKFNAKNYNAPFDFMLKKYFSNAFIKEVKVLEGNRILCFSVKANKAYKSYES
FT                   KIYFEFTGKNTNVILTDEKDLIIEALRHIDKSYRVVKPNVILEPLKPYKMDESFEEIKD
FT                   FKDYFSRKFTSIYESKIKQIKNLKLAQVDKKIQNLQELFSNLDEENSLLLKALEYRKRA
FT                   DVLFANLSVLKDYEREFKLDDFEGKELEFKLEFSPKQSANLYYKNAKKLEQKAKNLNIQ
FT                   RQNLKEKLDFTLSLKELLLQAKSEIELEILLPKKNSKKNQDHKQEDLVANFYFNEFKIC
FT                   VGKNEKGNEFLLKNAKKDDLWLHVRDIPSAHTLIVSNKQKISLDVIEFAARLCVSFSKL
FT                   KKGSYWVDYTLKNFVKVQQKAFVNYTNFKSINIMKD"
FT   gene            1391176..1391751
FT                   /locus_tag="C1336_000290009"
FT                   /note="C1336_000290009 identified by Glimmer3 with a raw
FT                   score of 13.87."
FT   CDS             1391176..1391751
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290009"
FT                   /product="putative molybdopterin-guanine dinucleotide
FT                   biosynthesis protein"
FT                   /note="C1336_000290009 identified by Glimmer3 with a raw
FT                   score of 13.87. Gene function extrapolated from C8J_1266
FT                   (CP000814.1) after blastn alignment (98.59 percent identity
FT                   over a 71 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30502.1"
FT                   /translation="MQLNELNCVILCGGKSSRMGQDKSKLILKNQNLTQFQVNKFSKIF
FT                   KNVYVSAKEDKFENHFSLIKDSLEFEVYSPMLALYSILSNFKNEFVFVLSVDSPKVGEN
FT                   ELLKMLPFLEQNYKIIIAKTPLHKHPLCGFYHSSLAQTCKNFLEKNEQKIGLLFSEIKT
FT                   KFVEFEDEDAFLNLNFYEEYEKFKSELK"
FT   gene            1391748..1392737
FT                   /locus_tag="C1336_000290010"
FT                   /note="C1336_000290010 identified by Glimmer3 with a raw
FT                   score of 11.49."
FT   CDS             1391748..1392737
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290010"
FT                   /product="phospholipase A"
FT                   /note="C1336_000290010 identified by Glimmer3 with a raw
FT                   score of 11.49. Gene function extrapolated from C8J_1267
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 72 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30503.1"
FT                   /translation="MRKIALFLSLCVFIWASDLQQALEHEKQGDYKKAMEIYKKLALKN
FT                   SSVLIPQEQNKTKQTTQNEKSIIAAKEERQDFARLALANYLEEDEYFNPLGISAYKMNY
FT                   FLPLAYSFNSLEENHNKSEAKFQLSIKKRLFENLLGLDEKYYIAYTQTSWWQIYEHSSP
FT                   FRETNYQPEFFIDFPLYLKDYEFFNNLRVGILHESNGKGDENLQSRSWNRIYVSTAILY
FT                   NKFLFVPRLWYRIPESKKDDDNPAILHYMGNFDVNLAYLGDDYFINLMLRNNLKFHDNK
FT                   GAIQVDLGYDIFNNGIYWYLQYFNGYGESLIDYNKHLQRLSTGFLISY"
FT   gene            1392823..1393791
FT                   /locus_tag="C1336_000290011"
FT                   /note="C1336_000290011 identified by Glimmer3 with a raw
FT                   score of 10.27."
FT   CDS             1392823..1393791
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290011"
FT                   /product="enterochelin transport system permease protein"
FT                   /note="C1336_000290011 identified by Glimmer3 with a raw
FT                   score of 10.27. Gene function extrapolated from C8J_1268
FT                   (CP000814.1) after blastn alignment (98.04 percent identity
FT                   over a 969 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30504.1"
FT                   /translation="MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLE
FT                   IITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKFVSPTTAGTMDCAKFGILISLIFFA
FT                   GTSFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFAYAL
FT                   NYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISY
FT                   NGILFLGLMIVSIITSLVIVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFL
FT                   LVCDIISRLVIFPFEMPLSITTGVLGSLIFILLLLKRKVYA"
FT   gene            1393784..1394722
FT                   /locus_tag="C1336_000290012"
FT                   /note="C1336_000290012 identified by Glimmer3 with a raw
FT                   score of 10.79."
FT   CDS             1393784..1394722
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290012"
FT                   /product="enterochelin ABC transporter, permease protein"
FT                   /note="C1336_000290012 identified by Glimmer3 with a raw
FT                   score of 10.79. Gene function extrapolated from
FT                   CJJ81176_1352 (CP000538.1) after blastn alignment (98.62
FT                   percent identity over a 363 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30505.1"
FT                   /translation="MRKKMLILSFLTLGMIGIFILVDLNGFDEYALKSRFLQIAAIIIV
FT                   AICIAVSTVIFQTLCNNKILTPAIIGLDSLYMLLQSALIFSFGATNLSVYKNDINFLIT
FT                   LVCMVVFSLGLYKILFSSDRSIYLIMLLGLVFGTLFSTLSSFFEVLIDPDEFMVIQGRM
FT                   FASFDNIAFDVLILAYIISFLSFIWIFRYMKFLDPLNLGKDLAINLGINYQKISKQLMI
FT                   IIAILTSISTALVGPITFLGLLVVNITYELFKTAKHSILLSACILISILALLGGVFFVS
FT                   RVFDYNATISVVINFLGGIYFIYLVLKGNKL"
FT   gene            1394719..1395474
FT                   /locus_tag="C1336_000290013"
FT                   /note="C1336_000290013 identified by Glimmer3 with a raw
FT                   score of 13.00."
FT   CDS             1394719..1395474
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290013"
FT                   /product="enterochelin ABC transporter, ATP-binding
FT                   protein"
FT                   /note="C1336_000290013 identified by Glimmer3 with a raw
FT                   score of 13.00. Gene function extrapolated from
FT                   CJJ81176_1353 (CP000538.1) after blastn alignment (97.62
FT                   percent identity over a 756 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30506.1"
FT                   /translation="MIKLKNITKFYDNKAIISDLSLDFHKGKITSIIGANGAGKSTLLA
FT                   LASRLIKPSSGEIYIDGMNLKDYKEQILAQKISILKQQNNINLRLKVEELVAFGRFPHS
FT                   QGRLNTNDKTKINEALEYMGLSNLRNEFLDTLSGGQKQRAFIAMIIAQDTEFVMFDEPL
FT                   NNLDMKHSVQIMQLMKNLVKDFNKSIAVVLHDINFASIYSDEIIALKDGKLLKQGSKDE
FT                   IINQENLKQIYDMDIPVSQIDGKKICIYF"
FT   gene            1395487..1396479
FT                   /locus_tag="C1336_000290014"
FT                   /note="C1336_000290014 identified by Glimmer3 with a raw
FT                   score of 11.69."
FT   CDS             1395487..1396479
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290014"
FT                   /product="enterochelin transport system substrate-binding
FT                   protein"
FT                   /note="C1336_000290014 identified by Glimmer3 with a raw
FT                   score of 11.69. Gene function extrapolated from C8J_1271
FT                   (CP000814.1) after blastn alignment (97.33 percent identity
FT                   over a 374 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30507.1"
FT                   /translation="MKKSLVFAFFAFFLSLILTACNSNSNENNASSTTKTNTATVKVLP
FT                   ISMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFDDLKLNDKVAGVPAKNLPKY
FT                   LQQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQSKFYDKLKEIAPTLFVGLDNANFL
FT                   SSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIVNEDKKALIVLTNSNKISAFGP
FT                   QSRFGIIHDVLGINAVDENIKVGTHGKSINSEFILEKNPDYIFVVDRNIIVGNKERAQG
FT                   ILDNALVAKTKAAQNKKIIYLDPEYWYLASGNGLESLKTMILEIKNAVK"
FT   gene            complement(1396552..1396641)
FT                   /locus_tag="C1336_000290077"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(1396552..1396641)
FT                   /locus_tag="C1336_000290077"
FT                   /product="tRNA-Ser"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            complement(1396705..1397259)
FT                   /locus_tag="C1336_000290015"
FT                   /note="C1336_000290015 identified by Glimmer3 with a raw
FT                   score of 10.31."
FT   CDS             complement(1396705..1397259)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290015"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290015 identified by Glimmer3 with a raw
FT                   score of 10.31. Gene function extrapolated from
FT                   CJJ81176_1358 (CP000538.1) after blastn alignment (97.30
FT                   percent identity over a 555 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30508.1"
FT                   /translation="MINKNKLFRQVHIYLSLFFLPCALLFALTGIAYIFGINQDVGLKV
FT                   EQYQLSKVIESGKEREALIEYLKTNGLKMPSNTDIIKSKDKGITIGGTHYSANITQNST
FT                   NEYNITLKTRSLLGDMIMLHKDKGAWYFSVLSVGFGITLFMLYISGLMITLFANKKDRS
FT                   KQFAVLGVGVVVTLLLAYLSL"
FT   gene            complement(1397396..1399228)
FT                   /locus_tag="C1336_000290016"
FT                   /note="C1336_000290016 identified by Glimmer3 with a raw
FT                   score of 13.99."
FT   CDS             complement(1397396..1399228)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290016"
FT                   /product="cytochrome c552"
FT                   /note="C1336_000290016 identified by Glimmer3 with a raw
FT                   score of 13.99. Gene function extrapolated from CJE1546
FT                   (CP000025.1) after blastn alignment (97.69 percent identity
FT                   over a 1822 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30509.1"
FT                   /translation="MKKNILRLGIVVLVLLIAGVLWLNNDINQKKEDEANKNAIAANAD
FT                   FSLLSDDDPNFEKWGKVFPEQLKMYLTVEKEEPKATEFGGNLAYSKLIRFPQLTILWAG
FT                   YPFSLDFNEERGHFWVQVDQMKTARNNKDFLNAHGLAAFKGQPAACMNCHSGWTPWLIK
FT                   NVAKGDFTAFNSTNYWTMIKNIPAVDGIVENSPEHAGPHGGKRMGVTCADCHNPNDMSL
FT                   RLTRPAAINALVSRGYEKDPVQGVKATREEMRTLVCSQCHVEYYFKPTGEKVKVMGETI
FT                   VDDSSKKWWNGTQKNYDEYEFWRDGNKAKEIETDGIVLTFPWSEWKKGQPFRIEMLDDY
FT                   YDKVRGVFGADFTHKLTGAQIIKIQHPESELYSGGVHAANGVSCVDCHMPYVREGAKKV
FT                   TQHNITSPLRDINSACKSCHKQSEDYLKAQVLDIQNSVAHDQRTAEYAIVSLIMDTKKL
FT                   RDELGNMEKFQSDGKADAKKISEELKEVLELHRKAQMRADFVNAENSTGFHNPHEASRM
FT                   LLQAVDMARMGQTKLVEIATANRIKDFKTSNLGFEDIQKFNPRELYYKVDVNGHKAGER
FT                   YYADEKDVNGNPPKELLEHDKELVPYNYQVIDKK"
FT   gene            complement(1399243..1399734)
FT                   /locus_tag="C1336_000290017"
FT                   /note="C1336_000290017 identified by Glimmer3 with a raw
FT                   score of 10.23."
FT   CDS             complement(1399243..1399734)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290017"
FT                   /product="putative periplasmic cytochrome c"
FT                   /note="C1336_000290017 identified by Glimmer3 with a raw
FT                   score of 10.23. Gene function extrapolated from C8J_1276
FT                   (CP000814.1) after blastn alignment (98.79 percent identity
FT                   over a 413 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30510.1"
FT                   /translation="MKKTSNLFTIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNNC
FT                   HIMNEVYNEYMAGPHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLGHAYAFTFKLD
FT                   ELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCASCHKDVGHKHGI
FT                   "
FT   gene            1399947..1402031
FT                   /locus_tag="C1336_000290018"
FT                   /note="C1336_000290018 identified by Glimmer3 with a raw
FT                   score of 13.66."
FT   CDS             1399947..1402031
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290018"
FT                   /product="polyphosphate kinase"
FT                   /note="C1336_000290018 identified by Glimmer3 with a raw
FT                   score of 13.66. Gene function extrapolated from C8J_1277
FT                   (CP000814.1) after blastn alignment (98.13 percent identity
FT                   over a 1708 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30511.1"
FT                   /translation="MQISPDMFINRELSWLRFNSRVLDQCSKNLPLLEKLKFIAIYCTN
FT                   LDEFYMIRVAGLKQLFSAGVNASSSDKMTPLQQLKAIRKYLHQEKELLERYFNEITSEL
FT                   EKENLFIKHYENLDENLKQKCDEYFFSNIFPVIVPIAVDATHPFPHLNNLSFSLAVKIC
FT                   DKAHPELVKFGMIRIPRVLPRFYEVSANIYVPIESIVHQHAEEIFPGYKLLASAAFRVT
FT                   RNADIVIEEEEADDFMMILEQGLKLRRKGAFVRLQIQKDADEQIVEFLNTHMKIFHKDV
FT                   YEYSILLNLPSLWQIAGNKTFTHLLSPLYTPKTLPPFDENLSIFDAVEKEDILIIQPFE
FT                   SFDPVYKFIKEASKDPEVISIRMTLYRVEKNSNIVQALIDAASDGKQVTVMVELKARFD
FT                   EENNLHWAKALENAGAHVIYGITGFKVHAKVSQVIRKQGDKLKFYMHLSTGNYNASSAK
FT                   IYTDVSYFTSKVEFARDTTKFFHILSGFSKNRRLQTLSMSPNQIKEKVLEMIRIETSKK
FT                   NEGVIVAKMNSLVDSDIIQALYEASMEGVQIDLIIRGICCLKPDEEYSKNIRVRSIIGK
FT                   YLEHARVFYFKHSEPNYFISSADWMPRNLERRLELMTPIYDERSKAKLAQFLRLQLSDN
FT                   VLAYELKNNGEYEKIPSSEKTIDSQQTLEEYVSKIYKTLKKDTDQSRATHLASKLFKEN
FT                   "
FT   gene            1402113..1403105
FT                   /locus_tag="C1336_000290019"
FT                   /note="C1336_000290019 identified by Glimmer3 with a raw
FT                   score of 8.52."
FT   CDS             1402113..1403105
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290019"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290019 identified by Glimmer3 with a raw
FT                   score of 8.52. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30512.1"
FT                   /translation="MKKYNTLDLFSGAGGFSLGFLKSGAFNILLSIDNNPKLSISYEKN
FT                   FDFIKHINRDILSFSDKDIQKLQQKYNFEVIIGGPPCQGFSLAGKIGRKELQDDRNKLF
FT                   LAYLKFIKNIKPKIFIMENVASLARHNKGQTLKEILQCFYNINYEVKYEILNTKDYSIA
FT                   QNRSRIFIVGTIKKNSFIFPKKENSQISIKKVIDDLPKLKNGEKSKIPNHNAMMHSNQM
FT                   LEKMSYIKDGGNKEQIPPEIRPKSGDMRKYIRYNSAKPSITITGDMRKVFHYSQNRALS
FT                   ARELARIQSFPDDFIFYGNSIDIQQQIGNAVAPLLAEKIANQVKIFLDA"
FT   gene            1403098..1404111
FT                   /locus_tag="C1336_000290020"
FT                   /note="C1336_000290020 identified by Glimmer3 with a raw
FT                   score of 3.08."
FT   CDS             1403098..1404111
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290020"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290020 identified by Glimmer3 with a raw
FT                   score of 3.08. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30513.1"
FT                   /translation="MHKYPKVNYIGNKEKISTWIIENLPIKKGKVLDLFSGGCAMSYAF
FT                   KNAGFSVISNDILYSNYCISKAIIENSNQILNLNITANELTDFFTQKSYKNISWLSNHL
FT                   YFDYEVKELACIINYSATLNEYEKFIFLALVRRAMIRKIPYSRMCIKWEEIVKFRDEEL
FT                   SYQKYGRRRAYHNISFLEHIYLNLKQYNNAVFDNGLKNFSHKLDCIKMLDKIAKVDLIY
FT                   IDPPYPSTMNNYFNFYGPYDKIFKEETKQCTDFTNKNTFLQNLKLIFEKAIGKTTYIAM
FT                   SLNNQSKPNPNEIITSVSNLTLNFFIYQKPHIYKVTGKENKKQNYEIVLIFKLIGS"
FT   gene            1404113..1405174
FT                   /locus_tag="C1336_000290021"
FT                   /note="C1336_000290021 identified by Glimmer3 with a raw
FT                   score of 3.33."
FT   CDS             1404113..1405174
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290021"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290021 identified by Glimmer3 with a raw
FT                   score of 3.33. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30514.1"
FT                   /translation="MKKQQYENYWQLTLEYSDFYGNNFNECLKIIIEFMDKNPQIDSQK
FT                   YQELQEKVYAFNPKSDFASVRKSINQFFKLGFINNKFEGYHSKTKEFLHEQNRTKKKIL
FT                   YSEILYDNASFSRSFRHPSNENELKFLVKTIEYCGSITKENLLALMYVKDTIHKNYLNK
FT                   QELEQLTHHIIQMHAAERKYNQIAYLWNICTNILTGIYLDQDNCLTLDRSDYSYTEKSA
FT                   NRDTYKQTLYKHLLYEESREFLSDVYCYVENLKYPLLVASHIKPYRVCDENEQFDKDNG
FT                   LLLSKSIDQLFDQGWISFENDGDIILNENLDENLKKFLATKRIHPKILNEKRLQYLAYH
FT                   RKYVFNNSKQYKF"
FT   gene            complement(1405573..1405983)
FT                   /locus_tag="C1336_000290022"
FT                   /note="C1336_000290022 identified by Glimmer3 with a raw
FT                   score of 14.17."
FT   CDS             complement(1405573..1405983)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290022"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290022 identified by Glimmer3 with a raw
FT                   score of 14.17. Gene function extrapolated from CJE1553
FT                   (CP000025.1) after blastn alignment (98.78 percent identity
FT                   over a 411 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30515.1"
FT                   /translation="MGILTKLELDYEIDDIEKFLQFFRTMCDRFEPLIIKLGSDSVRYK
FT                   EAIKELETLAHNTAWAARRLNLEEVTDFCVFCEEMMVQANRFNGPASDEFTDWMLLMSD
FT                   QFEKYCRSYENDDSVLAVFNPLIVNVPNIISK"
FT   gene            1406074..1407081
FT                   /locus_tag="C1336_000290023"
FT                   /note="C1336_000290023 identified by Glimmer3 with a raw
FT                   score of 12.02."
FT   CDS             1406074..1407081
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290023"
FT                   /product="holliday junction DNA helicase RuvB"
FT                   /note="C1336_000290023 identified by Glimmer3 with a raw
FT                   score of 12.02. Gene function extrapolated from C8J_1280
FT                   (CP000814.1) after blastn alignment (96.92 percent identity
FT                   over a 1008 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30516.1"
FT                   /translation="MDRIVEIEKYSFDETYETSLRPSNFDGYIGQESIKKNLNVFIAAA
FT                   KKRNECLDHILFSGPAGLGKTTLANIISYEMGANIKTTAAPMIEKSGDLAAILTNLSEG
FT                   DILFIDEIHRLSPAIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTRAGM
FT                   LSNPLRDRFGMQFRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPRIALR
FT                   LLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKPIGLAS
FT                   IAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASTKSYSALKLNYEKTLFEE"
FT   gene            1407085..1408128
FT                   /locus_tag="C1336_000290024"
FT                   /note="C1336_000290024 identified by Glimmer3 with a raw
FT                   score of 11.61."
FT   CDS             1407085..1408128
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290024"
FT                   /product="acid membrane antigen A"
FT                   /note="C1336_000290024 identified by Glimmer3 with a raw
FT                   score of 11.61. Gene function extrapolated from C8J_1281
FT                   (CP000814.1) after blastn alignment (99.17 percent identity
FT                   over a 963 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30517.1"
FT                   /translation="MQNGKFFLISFILVILFLLLYLFKGFLLVIIIASLMAVATSNINA
FT                   KFLNLTKGHKFLASILTTTCMVLLFFAPFVYAMIELAKALKNFDINLVTQTLDYVKNYQ
FT                   FTLPESFNFLEPKIKEFLASIDLNSISKQILSYASSFTKSGAKFLIDMVLICVFYFFAN
FT                   LYGTELVIYLKSIIPIDKKELDDVLSEVGNVMAVVLYSMVIVAIFQGALFGLITMFYGY
FT                   DGILMGVIFAVSSLIPAIGGALIYVPVSLYEFASNNLNSALVIFIYSVIVISFIADTLI
FT                   KPLIIKWINKKLVKTPTKINELLIFLAMIAGISTFGFWGIILGPAILTFFVSTLRMYVI
FT                   LKDKNLI"
FT   gene            complement(1408158..1409549)
FT                   /locus_tag="C1336_000290025"
FT                   /note="C1336_000290025 identified by Glimmer3 with a raw
FT                   score of 15.41."
FT   CDS             complement(1408158..1409549)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290025"
FT                   /product="fumarate hydratase, class II"
FT                   /note="C1336_000290025 identified by Glimmer3 with a raw
FT                   score of 15.41. Gene function extrapolated from CJE1556
FT                   (CP000025.1) after blastn alignment (98.20 percent identity
FT                   over a 1392 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30518.1"
FT                   /translation="MEYRVEHDTMGEVKVPNDKYWGAQTERSFENFKIGCEKMPKVLIY
FT                   AFANLKKSLALVNNKLGKLDDAKKNAIVQACDEIIAGKFDDNFPLAIWQTGSGTQSNMN
FT                   MNEVIANRATEIMGGDFRKEKLVHPNDHVNMSQSSNDTFPTAMSIVAVEQVEKKLIPAL
FT                   DELIATFEKKVKEFDGIIKIGRTHLQDATPLTLAQEFSGYLSMLLHSKEQIIASLPTLR
FT                   ELAIGGTAVGTGLNAHPELSQKVSEELTQLIGTKFVSSPNKFHALTSHDAINFTHGAMK
FT                   GLAANLMKIANDIRWLASGPRCGLGELIIPENEPGSSIMPGKVNPTQCEAITMVAVQVM
FT                   GNDAAIGFAASQGNFELNVFKPVIIYNFLQSLDLLADSMHSFNIHCAVGIEPNRAKIDH
FT                   NLHNSLMLVTALNPHIGYENAAKVAKNAHKKGISLKESAMELGLVSEEDFNKFVDPTKM
FT                   IGPKA"
FT   gene            complement(1409683..1411479)
FT                   /locus_tag="C1336_000290026"
FT                   /note="C1336_000290026 identified by Glimmer3 with a raw
FT                   score of 15.70."
FT   CDS             complement(1409683..1411479)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290026"
FT                   /product="glucosamine--fructose-6-phosphate
FT                   aminotransferase (isomerizing)"
FT                   /note="C1336_000290026 identified by Glimmer3 with a raw
FT                   score of 15.70. Gene function extrapolated from C8J_1283
FT                   (CP000814.1) after blastn alignment (98.00 percent identity
FT                   over a 1797 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30519.1"
FT                   /translation="MCGIVGYIGNNEKKQIILNGLKELEYRGYDSAGMAVMQEGELSFF
FT                   KAVGKLENLANKCMDFESQGYGFAIGHTRWATHGKPTEINAHPHLGQYSCVIHNGIIEN
FT                   YKEIKDKLEKEGVSFLSQTDTEVIVQLFEFYARNLGVFEAWQKTIKELRGAFATLLVTK
FT                   KDPHHVYFAKNAAPLIIGKNANKEWYFSSGDAPLIGSCDEVMYLEDLSLGYASKDELVV
FT                   YENDVLKSLCFSKFSGDKAYAKKDGFRFFMEKEIYEQSRVMSEVLMGRIQGDEVVFDEL
FT                   NNEDLSQVDEITLCACGTSYHAAMASAYLFERIAKVKAKVEIASEFRYREAIIKKDSLF
FT                   IVISQSGETADTLEALKIAKEQGAKTFAICNVDNSNIVRLAHLSLLTRAGIEKGVASTK
FT                   AFATQVLTLWMLAIFMAQKRNLNVSAEIKALLHTPNCVSVKQALHEKIHRLSKRYLDGH
FT                   GFFFIGRDVFYPLALEGALKLKELSYLHAEGYPAGEMKHGPIALADSKLYTIALMPKHM
FT                   LYEKTKSNVEELIARDSTVLSISPLEFDLSDDFIKTNEQDHYMCEFFEMMVITQLLAME
FT                   ISIRLGNDVDMPRNLAKSVTVE"
FT   gene            complement(1411483..1413831)
FT                   /locus_tag="C1336_000290027"
FT                   /note="C1336_000290027 identified by Glimmer3 with a raw
FT                   score of 9.77."
FT   CDS             complement(1411483..1413831)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290027"
FT                   /product="GlnD family protein"
FT                   /note="C1336_000290027 identified by Glimmer3 with a raw
FT                   score of 9.77. Gene function extrapolated from
FT                   JJD26997_0283 (CP000768.1) after blastn alignment (100.00
FT                   percent identity over a 206 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30520.1"
FT                   /translation="MLNKELEIFKKNLSSYTQSCRKFFLKQGAFSLYHSKNMDNFIKKA
FT                   YDIVLKDYFDDFSPPSDNIPFCVLASKAYANNSLCFNESISLIFVYKDIKAFHLKPMIK
FT                   AFIEILNDAHLQINSVVLEFNGLYNASNELKTSIIQTRFICGSRILFKGIKTKFESILK
FT                   ENKNDFAKLLLENFKEFDIPFIKQEFNILKDFGGLNHLRSLEGLLVLFKTSPKNYALNF
FT                   IDEKNLSELRLAGDFLLSLKSAMNLLSAKDEDEFLLINVHDLSELMYKKAKKHFGANEL
FT                   LVQKALQSMHTIGFYTHFLAKQIQDGLNHTLKQEYKFKTLVEVLEYLLKLEDKQVIFDL
FT                   NLVFALRRLKYGKKDIEKALMLFEKIFYKRHSFCVLKLLLDSGILKDLCKPFWTVRFLS
FT                   DEEGNYSFDEQVFLMLSEFEKYEDELEILQKLKTDEKMILKLVILLSAIESENEISLAG
FT                   IYRAYCSKFDLKNEILEWGLKIFKNNNALKDLVEKEDIYNPIVVSSLVSKLENLKNLEL
FT                   LYTLTWLKAKALNYNAFYFRVLDKLLENAKQGFEDENLLEESARRVKKELTLKRSKIFL
FT                   EQDEILQDKIIHIKSNLFIIKNTFEDIVMISKLAKENDFKFWFSNETNLSLQIVAPLHF
FT                   NIAIILSSLTNLNLIFMNFFELFDDKIYLRFEYDNIISDEQKLKLCELLNSNLSGFNLK
FT                   KIKKPVIKKDELKLDLNYSKMYAKLGLNTKDQQGLMAYLMNVFNELELVLCAAKIQTIR
FT                   QRTRNIFIFQKNEKLEHSEQKLVNLLISE"
FT   gene            1413974..1415038
FT                   /locus_tag="C1336_000290028"
FT                   /note="C1336_000290028 identified by Glimmer3 with a raw
FT                   score of 14.01."
FT   CDS             1413974..1415038
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290028"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290028 identified by Glimmer3 with a raw
FT                   score of 14.01. Gene function extrapolated from C8J_1287
FT                   (CP000814.1) after blastn alignment (97.56 percent identity
FT                   over a 1065 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30521.1"
FT                   /translation="MKNLITKLENEERLNQEEANALWDLDLFTLGKYAHKKRTKLHGKK
FT                   VYFNINRHINPTNICADTCKFCAFSAHRKNPNPYLMTHEEIMKIVDETVKRETKEVHIV
FT                   SAHNKDTTWQWYLEIFKMIKEKYPNLHVKAMTAAEIDFLHRRFKMSYEEVIEKMLEYGV
FT                   DSMPGGGAEIFDEEVRKKICHGKVSSENWLKIHKLWHEKGKQSNATMLFGHIEERHHRI
FT                   DHMLRLRDLQDQTGGFNAFIPLVWQRDNSFIQTDKIMDSEEILKTIAIARLVLDNIKNI
FT                   KAYWATMTLNLAMVAQEFGANDLDGTIEKESIQSAGGAKSAKGTSLKTFIDMIKTSNLI
FT                   PVERDSLYNELKTY"
FT   gene            1415048..1416367
FT                   /locus_tag="C1336_000290029"
FT                   /note="C1336_000290029 identified by Glimmer3 with a raw
FT                   score of 11.43."
FT   CDS             1415048..1416367
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290029"
FT                   /product="putative permease"
FT                   /note="C1336_000290029 identified by Glimmer3 with a raw
FT                   score of 11.43. Gene function extrapolated from Cj1369
FT                   (AL111168.1) after blastn alignment (98.59 percent identity
FT                   over a 284 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30522.1"
FT                   /translation="MDFFKLKENNTSFKAEVIAGLTTFLAMVYIIPVNSSIVGNTGMPI
FT                   EALITATALITIVASAFNAFFANTPVAMSVGMGLNAYFTFAVCLGQNIAWQSALGAVFI
FT                   SSIIFLILSFTHFRLWVIRNIPKDLRLAICAGIGCFIAFLGLSQMGVIMHNKDTLVSIG
FT                   NFKSPHVFFGIFTLALIIFFWAIKLRGAFILGVLASSIIAWIFHLDNASFPVQIFSLPN
FT                   FSMENGLGAIFLQLDIKSALNITMIPIILTFFITQLFDSIGTITGVGERGKIFDDPKNG
FT                   EKKLSKTLMADATGSALGAMTGTSTVTAFVESTTGVESGGRTGLAALVVAICFAFTLFL
FT                   LPLFKAIPANAIYPVLVMVGILMFMEVKNIDFKDSAIAVASFFTIIMMPFTYSITTGFA
FT                   FGFLSYLLVRIFKREWDKINLGIIVLSLLSLGNFLLIALH"
FT   gene            1416382..1416825
FT                   /locus_tag="C1336_000290030"
FT                   /note="C1336_000290030 identified by Glimmer3 with a raw
FT                   score of 15.88."
FT   CDS             1416382..1416825
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290030"
FT                   /product="nucleotide phosphoribosyltransferase, putative"
FT                   /note="C1336_000290030 identified by Glimmer3 with a raw
FT                   score of 15.88. Gene function extrapolated from CJE1562
FT                   (CP000025.1) after blastn alignment (97.07 percent identity
FT                   over a 444 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30523.1"
FT                   /translation="MIFYSYEEFKEDVKILAKEIKKDFNPDALLAIARGGMSLGHSLAV
FT                   ALKTRQLFALNSIHYDDTKKLDTIEIFNIPDLSKHKKILLIDDIVDSGESLVEIKKVLL
FT                   EKFPHIELKIATIFYKKTALLEPDFKAKEATEWVDFYWDINLD"
FT   gene            1416870..1417568
FT                   /locus_tag="C1336_000290031"
FT                   /note="C1336_000290031 identified by Glimmer3 with a raw
FT                   score of 11.36."
FT   CDS             1416870..1417568
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290031"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290031 identified by Glimmer3 with a raw
FT                   score of 11.36. Gene function extrapolated from Cj1371
FT                   (AL111168.1) after blastn alignment (97.83 percent identity
FT                   over a 645 bp alignment) - for clarity, the original
FT                   suspect product name 'putative periplasmic protein (VacJ
FT                   homolog)' has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30524.1"
FT                   /translation="MRIKFISFILIFFTIFAFAKEQNLDDFEQEYQNYQVNDPLSGYNK
FT                   AMTSFNVALYDYGLRPVLKGYNAITPEFIRLGVRNFFDNLLAPLRFISNVLQFKFEEAG
FT                   EEFKRFTANTIMGFGGLMDVASKMGLKKHPADLGTVLAHWGVGSGFHIVLPILGPSNLR
FT                   DTLTLPATWYASFTAYIDPTWASIAISAYGFGNELSFRLDEIDEIYHNTPNLYPFLRDA
FT                   YEQRRNELSK"
FT   gene            1417578..1418147
FT                   /locus_tag="C1336_000290032"
FT                   /note="C1336_000290032 identified by Glimmer3 with a raw
FT                   score of 14.03."
FT   CDS             1417578..1418147
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290032"
FT                   /product="putative periplasmic protein"
FT                   /note="C1336_000290032 identified by Glimmer3 with a raw
FT                   score of 14.03. Gene function extrapolated from Cj1372
FT                   (AL111168.1) after blastn alignment (99.53 percent identity
FT                   over a 213 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30525.1"
FT                   /translation="MKKIFLILALFFNAFALQLDEISSTMQKNIDASLKLLQDSKEDKK
FT                   QAADGIFKLFDSIIDYKLMAKLSLSKNYSKLNPKEQEKFTTAFEASLKKSFTDKLSLYK
FT                   DQVLKVKNGELKNEKRYFLTTSMVVDGEEKNIIFKFYNDNNNWLIYDVDVLGVSIVQTY
FT                   RSQFGDILANQGFDALLQKLESIVIE"
FT   gene            1418147..1420618
FT                   /locus_tag="C1336_000290033"
FT                   /note="C1336_000290033 identified by Glimmer3 with a raw
FT                   score of 12.59."
FT   CDS             1418147..1420618
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290033"
FT                   /product="putative ntegral membrane protein"
FT                   /note="C1336_000290033 identified by Glimmer3 with a raw
FT                   score of 12.59. Gene function extrapolated from Cj1373
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 99 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30526.1"
FT                   /translation="MFAKLLKFFISRPKSTFFGTLFICLFLSFFAFKLSVDASAESLLL
FT                   EDDADLKTFREISKHYKSDNFLLLAFKPYDEKPFSNENLAKLKKLHEELEKAPLVERVF
FT                   SIINAPLLQSSKNTDLKELLKNIPNIESQDINRTKAQNEILNSPFYKNNIISKDGKVTG
FT                   LIIYLKPDTVYNDLVEKRDLATNEKEKDRIRLAIKEHQDKQKVITKQSLDTIKSIVRNY
FT                   EKNKDTLYLGGVSMIADDMIAYIKSDLVLYGVSLVFLLGFALYYFFRSWRFVFLPLFIC
FT                   FISLSAASGVFALLNFQITVISSNYVALVLIITLSVVVHLITHFIESTQNHPKAKVERI
FT                   VLETLLAKANPSLYAIVTTMIGFFSLILSNIEPIIKLGIMMSIGIGLALIFSYLFLASI
FT                   LVLLKPKNYHKKEFKFNLLAFCAKTALDPKKRRMIYGISVLAIILALIGISKLRVENSF
FT                   VNYFKDGSEIKKGLLVIDKNLGGTLPLEVIIRFPNNKNDQNISDALDSFESEFENLATQ
FT                   ETYWFDSKKTRIAKKVHEFLENKEFVGSVLSLNSLLTLGKNINDGKELDDFALAFLNEN
FT                   LPAKFKQDLLSPFVSIENNELRFSMRIVDSDPNLRRNEFLIDLKKQLNELVKNDGVEVQ
FT                   ITGIMVLYNNMLQSLFSSQFDTLIFVILTIFILFIIVFRDLKFSVAAILVNVIPLSVVF
FT                   ALMGLLGIPLDMMSITIAAIAIGIGVDDALHYIYRFGEEIKNKSLEEAIMISHLSIGSA
FT                   LYYTTISIVLGFSVMMSSNFIPTIYFGILTVFVMILLLSGSLFLLPSFLITIYSKKTKF
FT                   PNQHKEHILKQ"
FT   gene            complement(1420649..1421251)
FT                   /locus_tag="C1336_000290034"
FT                   /note="C1336_000290034 identified by Glimmer3 with a raw
FT                   score of 17.19."
FT   CDS             complement(1420649..1421251)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290034"
FT                   /product="non-canonical purine NTP pyrophosphatase,
FT                   RdgB/HAM1 family"
FT                   /note="C1336_000290034 identified by Glimmer3 with a raw
FT                   score of 17.19. Gene function extrapolated from CJE1566
FT                   (CP000025.1) after blastn alignment (97.84 percent identity
FT                   over a 603 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30527.1"
FT                   /translation="MKIILATSNKHKVLELKEILKDFEIYAFDEVLTPFEIEENGKTFK
FT                   ENALIKARAVFNTLDEKQKKDFIALSDDSGICVDILEGNPGIYSARFSGKGDDKSNRDK
FT                   LVNEMIKKGFKQSRAHYVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLFIPK
FT                   GFDKTLAQLSVDEKNNISHRFKALELAKIILKILNKG"
FT   gene            1421418..1422713
FT                   /locus_tag="C1336_000290035"
FT                   /note="C1336_000290035 identified by Glimmer3 with a raw
FT                   score of 13.81."
FT   CDS             1421418..1422713
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290035"
FT                   /product="multidrug resistance efflux transporter,
FT                   putative"
FT                   /note="C1336_000290035 identified by Glimmer3 with a raw
FT                   score of 13.81. Gene function extrapolated from C8J_1294
FT                   (CP000814.1) after blastn alignment (99.10 percent identity
FT                   over a 221 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30528.1"
FT                   /translation="MLNNVLPLSFIVGTRFFGLFIVLPVLSLYALKLEGANEFLVGLLV
FT                   GVYALTQMILQMPFGILSDKIGRKKTMLIGLIIFIIGSLICSFAENIYIMLLGRMLQGA
FT                   GAIGAVATAMISDFITEENRGKAMAVMGSFIGLSFAASMVISPLMSAKWGLSSLFDLSA
FT                   ALSLLCIILLYTVVPKENKITHENEKTPFFHLIKQKNLALMNLTNFMQKMLMSIAFLSI
FT                   PIILVKHLGFASDKLWIVYSASMVAGFIAMGFAGSLGEKRGLAKQILLLGIVFFILSYL
FT                   FFAFSNSMDFFIIAVVIFFIGFNLHEPIMQSCASKFCKVHEKGAALGLFNAFGYGGSFI
FT                   GGIIGGIFLHLDALNLLAIILVILALIWLVALFFLKNPADFKNLYLPLDTPLNFSSFSE
FT                   NLGVVDIYKNSKNLVVKFDSKLTNKKELEEKL"
FT   gene            1422710..1423518
FT                   /locus_tag="C1336_000290076"
FT                   /note="Features C1336_000290036, C1336_000290037 joined to
FT                   form C1336_000290076 to correct 454 sequencing error
FT                   (C1336_000290036 identified by Glimmer3 with a raw score of
FT                   2.32, C1336_000290037 identified by Glimmer3 with a raw
FT                   score of 7.42)."
FT   CDS             join(1422710..1422928,1422928..1423518)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290076"
FT                   /product="putative periplasmic protein"
FT                   /note="Features C1336_000290036, C1336_000290037 joined to
FT                   form C1336_000290076 to correct 454 sequencing error
FT                   (C1336_000290036 identified by Glimmer3 with a raw score of
FT                   2.32, C1336_000290037 identified by Glimmer3 with a raw
FT                   score of 7.42). Gene function extrapolated from Cj1376
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 120 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30529.1"
FT                   /translation="MKKILFLFCSFFLAFAKPSLEIPKLSKQAKQNFILENVKFNYNDT
FT                   IYKIFIAKNKNENLNYKYKIIYLLDGNAFFSSFLNLFNTPVKENLLIIGIGYDNNLAFD
FT                   TQKRTKDYTPTTNLNKQGGGSKEFRNFLITQLIPYINKMYPIDFSHRILFGHSFGGLFA
FT                   IDTLLYDSKIFSHYFIISPSLWWDNSEFLPNIIKLQTCPKIYIGLGSLETNSSIIKGVA
FT                   KLNAQKLSEKISKETNCKTHFKLFKNETHGSVISKAMPWMKKFLDLN"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1423511..1425172)
FT                   /locus_tag="C1336_000290038"
FT                   /note="C1336_000290038 identified by Glimmer3 with a raw
FT                   score of 15.73."
FT   CDS             complement(1423511..1425172)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290038"
FT                   /product="iron-sulfur cluster-binding domain protein"
FT                   /note="C1336_000290038 identified by Glimmer3 with a raw
FT                   score of 15.73. Gene function extrapolated from C8J_1295
FT                   (CP000814.1) after blastn alignment (98.70 percent identity
FT                   over a 540 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30530.1"
FT                   /translation="MQDFVYIKNDVLIPLPDAIEILDQANDKEALVCNDKNQKAQIYAP
FT                   EINFYLKNSQDEILEQSKNVLTLYEARASVYDLGLDLEQSKEVKNRLILVDSDTQTVEF
FT                   LKEHGFKVIALSSAEILAVFGSVGELCAVVKNQGEEVEIDFDFLLFKAKDLSVVRKDFT
FT                   RQSGCYNLLNFENLEVLLEFLQSKSPKYHYKTYISYNASVCQYHERRSEHCAKCAEICP
FT                   TVAILKDDEKKHLEFSQVDCLGCGGCISVCPSGSLDYAPMPRESFFTLCEFYKDKKILI
FT                   IPKKMSLENLNLALPKDVLPFMIEGEKWLSSMHFLTLLQNSGANLVFYTDFVSRGSNEA
FT                   IVLLNTFFERKFQKKAIFVAKNEKELQNVLKEQEFIQDLKYDFHNNTLTTRENFAKRMQ
FT                   EMIKNEDFGSIESGEWLRYGKVEINPNTCTLCLSCVGACNVGALIADKQENALKFNASL
FT                   CTTCGYCELSCAEKDTLKLVRSGMEFRASYFEYQTMAKDELFACIECGKEFATKKAVEK
FT                   IANLMKPKFGNDENKIKTLYCCADCKAKVMIKAMIN"
FT   gene            1425250..1426572
FT                   /locus_tag="C1336_000290039"
FT                   /note="C1336_000290039 identified by Glimmer3 with a raw
FT                   score of 12.68."
FT   CDS             1425250..1426572
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290039"
FT                   /product="selenocysteine synthase"
FT                   /note="C1336_000290039 identified by Glimmer3 with a raw
FT                   score of 12.68. Gene function extrapolated from C8J_1296
FT                   (CP000814.1) after blastn alignment (98.68 percent identity
FT                   over a 757 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30531.1"
FT                   /translation="MNKLRTFPQINTLIEDESLKSYPFYIKAFFCKKVVAKLKENFSQD
FT                   EISKDKLLLEIKKEIKTFYRKDLQSVINASGVVIHTNLGRSVIHEELYEACKDIICNYS
FT                   NVEFDLENGKRGSRYALVLEKLKMLFECEDALVVNNNAAAVFLVLNSLCYNKEIISSRG
FT                   ELVEIGGSFRVPEVIKAAGVKLCEVGTSNKTHLKDYEQAISENTALILKTHKSNFSLMG
FT                   FHSEVNIKDLHELAKEKGLLSYYDLGSGWCENLNEKLIKNEPKIKKLVQECDILSFSGD
FT                   KLFGSVQAGIILGKKELIEKLKQNQLLRMLRVDKLTLSFLNESLKAYLQKDYEKIITLK
FT                   LLNDDLSFIEEKALRVQKELKFQTQLKKSKSLVGGGSMPDKSLDTYILTFQGDALKLQT
FT                   RFRKENIIGRIENDEFILDFRTIRENELQKLILTINQMENL"
FT   gene            1426569..1428374
FT                   /locus_tag="C1336_000290040"
FT                   /note="C1336_000290040 identified by Glimmer3 with a raw
FT                   score of 10.97."
FT   CDS             1426569..1428374
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290040"
FT                   /product="selenocysteine-specific elongation factor"
FT                   /note="C1336_000290040 identified by Glimmer3 with a raw
FT                   score of 10.97. Gene function extrapolated from CJE1570
FT                   (CP000025.1) after blastn alignment (98.71 percent identity
FT                   over a 699 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30532.1"
FT                   /translation="MKSVIIGTAGHIDHGKTSLIKALNGFEGDSLKEEQERQITINLSF
FT                   SNLKLKDKNISFIDVPGHKDLVKTMVSGAFGFSVCLFVVDINEGLKEQSLEHLEILKIL
FT                   DIKNIILVLSKCDLCENIEQKSVEILEELKNLDYSILKVFHTSIKNNQGIEELKNYLYT
FT                   IENKENDEELIFHYYIDRVFSLKGIGTVVTGSLNEGSITLNEKIICLDTQKELIVKNIQ
FT                   NHDTNLEQIKACNRVALSLNCDYKELKKGYLLSKKGYFKAFKECDTLVKAKNLQNSKMI
FT                   FCVGSRQIECKINILKKLENDEFFVHFSFDKNVFLSFDEAFILLQNNRVIGGGRVLNPL
FT                   SEPLKKEQKNKFLMFLKNKDFKAAFSFLKDAHKYGFGLLSSYQRFKLSHQKALKLAKEL
FT                   NQVFVDEKNLNVYHLQSLEEIKNFIKFILEKNPYAMLSAHSLALRITWASENFCELGLK
FT                   EMSNLLDFQNGIYFKKGIDFEKLQEKNNNQLYEILKKQGIKPEAPYNLYDFLELDRKSG
FT                   DNILKKLTQKGLVVRLSHNLFIEKQALEKLMQECLNLLKNQSLDVQSMKEYFNLSRKYA
FT                   IAYLEYLDKFPQVSKEAEKRFLTNI"
FT   gene            1428423..1429133
FT                   /locus_tag="C1336_000290041"
FT                   /note="C1336_000290041 identified by Glimmer3 with a raw
FT                   score of 12.53."
FT   CDS             1428423..1429133
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290041"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290041 identified by Glimmer3 with a raw
FT                   score of 12.53. Gene function extrapolated from
FT                   CJJ81176_1382 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 99 bp alignment) - for clarity, the
FT                   original product name 'conserved hypothetical protein' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30533.1"
FT                   /translation="MKKLSLILACSASLFAASNSEISDFYSKSIKAQFPNATVSVSNRQ
FT                   KVGNTGFESVVVSVELNGQKQENILFTKDSLITPDLIDLKTGISYAQEYEMKKFQEARE
FT                   NFTKNAKAVAQKETMVIALGDKNKPAIYVFSDPECPYCREHLAQIDDELKNYQVNYILT
FT                   PVHGKSAFEKSALIYKEAKKAKNDKEKIAILNKYYDANIKNYPKVSDAELKEVFSLYEK
FT                   YRSLGLSATPTIIK"
FT   gene            1429139..1429669
FT                   /locus_tag="C1336_000290042"
FT                   /note="C1336_000290042 identified by Glimmer3 with a raw
FT                   score of 12.42."
FT   CDS             1429139..1429669
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290042"
FT                   /product="lipoprotein, putative"
FT                   /note="C1336_000290042 identified by Glimmer3 with a raw
FT                   score of 12.42. Gene function extrapolated from
FT                   CJJ81176_1383 (CP000538.1) after blastn alignment (99.03
FT                   percent identity over a 514 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30534.1"
FT                   /translation="MSKFALILSFFIALFMSACTNATFIQSFIQTSNEGIFIRSQKQQS
FT                   FKISFQNPSQLRTTLDRDLALKLKNLGLKEVKENADYEILINLVDMKKRSYAQKITTSA
FT                   RFFYDFDPFESDGEWMVENYYTMQVNLQINSKNYNSQKTSLLARTAYLGNKEHCQLSLE
FT                   NKIINQIVNFFYF"
FT   gene            complement(1429715..1430206)
FT                   /locus_tag="C1336_000290043"
FT                   /note="C1336_000290043 identified by Glimmer3 with a raw
FT                   score of 17.45."
FT   CDS             complement(1429715..1430206)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290043"
FT                   /product="flavodoxin"
FT                   /note="C1336_000290043 identified by Glimmer3 with a raw
FT                   score of 17.45. Gene function extrapolated from C8J_1300
FT                   (CP000814.1) after blastn alignment (99.80 percent identity
FT                   over a 492 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30535.1"
FT                   /translation="MSVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSYD
FT                   KLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAQNL
FT                   KDAGANLVGEVSTDGYTFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWVEQIKPYFA
FT                   "
FT   gene            complement(1430206..1430901)
FT                   /locus_tag="C1336_000290044"
FT                   /note="C1336_000290044 identified by Glimmer3 with a raw
FT                   score of 5.62."
FT   CDS             complement(1430206..1430901)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290044"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290044 identified by Glimmer3 with a raw
FT                   score of 5.62. Gene function extrapolated from C8J_1301
FT                   (CP000814.1) after blastn alignment (99.24 percent identity
FT                   over a 131 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30536.1"
FT                   /translation="MLFGFDDKREFIPQIYRYLNNQELMLTFLTQYNASVDSALKIPLL
FT                   YAKNTKSLKMIFGNFLHDIMHVSFGKIQNINIKLNVYAFYFQKRKSLIFNTKISKNIDL
FT                   LRLLRIYLYGICFDAQILFSSYVYDKVSFQNNGKNIDQDGNLIIIDKKFAILPLCKEIN
FT                   THNLKIENEIHGLLNLIKENNFEKFYIVCPRNKNFTHFIEIKHFLCDLNKTMLKLVPYK
FT                   ISNQIIRRK"
FT   gene            complement(1430904..1431218)
FT                   /locus_tag="C1336_000290045"
FT                   /note="C1336_000290045 identified by Glimmer3 with a raw
FT                   score of 12.11."
FT   CDS             complement(1430904..1431218)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290045"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290045 identified by Glimmer3 with a raw
FT                   score of 12.11. Gene function extrapolated from CJE1575
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 183 bp alignment) - for clarity, the
FT                   original product name 'conserved hypothetical protein' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30537.1"
FT                   /translation="MSVLVIGADEITPIRAVLHDLGAKKIEHWDARNENRVNRKPIPCD
FT                   TECIVMLTSFLNHNTMKKIKNEAKKRKIPLVCAKRSVSCVYCEYCKIFNLNKEFSCYKG
FT                   "
FT   gene            1431389..1432813
FT                   /locus_tag="C1336_000290046"
FT                   /note="C1336_000290046 identified by Glimmer3 with a raw
FT                   score of 13.21."
FT   CDS             1431389..1432813
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290046"
FT                   /product="catalase"
FT                   /note="C1336_000290046 identified by Glimmer3 with a raw
FT                   score of 13.21. Gene function extrapolated from
FT                   CJJ81176_1387 (CP000538.1) after blastn alignment (98.53
FT                   percent identity over a 1425 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30538.1"
FT                   /translation="MKKLTNDFGNIIADNQNSLSAGAKGPLLMQDYLLLEKLAHQNRER
FT                   IPERTVHAKGSGAYGEIKITADLSAYTKAKIFQKGEVTPLFLRFSTVAGEAGAADAERD
FT                   VRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWDFWS
FT                   LCPESLHQVTILMSDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGIKNLT
FT                   NQEAAELIAKDRESHQRDLYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLTKIWPH
FT                   SLVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSYPDAQRY
FT                   RIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDKSYLEPDL
FT                   VLEGVAQRYAPLDNDFYTQPRALFNLMNDDQKTQLFHNIVASMEGVDEKIITRALEHFE
FT                   KISPDYAKGIKKALEK"
FT   gene            1432870..1433340
FT                   /locus_tag="C1336_000290047"
FT                   /note="C1336_000290047 identified by Glimmer3 with a raw
FT                   score of 16.89."
FT   CDS             1432870..1433340
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290047"
FT                   /product="ankyrin repeat protein"
FT                   /note="C1336_000290047 identified by Glimmer3 with a raw
FT                   score of 16.89. Gene function extrapolated from CJE1577
FT                   (CP000025.1) after blastn alignment (98.26 percent identity
FT                   over a 402 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30539.1"
FT                   /translation="MTTLSLEEEKRFEELCKMAFNFARNNECENLKIMIEAGLNVNLKT
FT                   HKGDSLLMLAAYNNSYESAKMLLEKGAKVDEKNDRGQTPLAGVCFKGYLPMCELLVKYG
FT                   ANIDENNGLGMTPYTFAIMFGRKDVAEFLLKKSKNNFLKKMSLKILKFIKKF"
FT   gene            complement(1433337..1433996)
FT                   /locus_tag="C1336_000290048"
FT                   /note="C1336_000290048 identified by Glimmer3 with a raw
FT                   score of 8.83."
FT   CDS             complement(1433337..1433996)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290048"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290048 identified by Glimmer3 with a raw
FT                   score of 8.83. Gene function extrapolated from C8J_1305
FT                   (CP000814.1) after blastn alignment (98.63 percent identity
FT                   over a 656 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30540.1"
FT                   /translation="MDEGQKQQFIKLTYFLGEVLGEQYEIVFHVITEDGAYIAAIANNH
FT                   ISGRSLDSPLTAFASELMQNKKYLEKDFLCDYKALVGKSKLIRGSTFFIKNHDKLVGIL
FT                   CINHDTSIMRDLICKMIDLEKIGDMGDILGNISFSQNDSNIETLSHSIEDILVQSVDSS
FT                   YLNSDYQLSITQKEEIAEKLYEKGIFNIKGAVPIVAKFLKISEPSVYRYLKKFKKY"
FT   gene            1434163..1434525
FT                   /locus_tag="C1336_000290049"
FT                   /note="C1336_000290049 identified by Glimmer3 with a raw
FT                   score of 17.00."
FT   CDS             1434163..1434525
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290049"
FT                   /product="endoribonuclease L-PSP, putative"
FT                   /note="C1336_000290049 identified by Glimmer3 with a raw
FT                   score of 17.00. Gene function extrapolated from CJE1579
FT                   (CP000025.1) after blastn alignment (97.21 percent identity
FT                   over a 359 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30541.1"
FT                   /translation="MSNYPKAIGPYSAYREANGLLFISGQLPINPDSGEIESHDIKEQT
FT                   KQSLKNIGAILEENGISYDKVIKTTCFLADINDFIAFNEIYAEFFKDPYPARSAFAVKD
FT                   LPKKAKVEIEIIAQKG"
FT   gene            1434529..1435968
FT                   /locus_tag="C1336_000290050"
FT                   /note="C1336_000290050 identified by Glimmer3 with a raw
FT                   score of 12.61."
FT   CDS             1434529..1435968
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290050"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290050 identified by Glimmer3 with a raw
FT                   score of 12.61. Gene function extrapolated from C8J_1307
FT                   (CP000814.1) after blastn alignment (98.78 percent identity
FT                   over a 493 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30542.1"
FT                   /translation="MLGIVLSLFSIFLLVFMLYKKINAHMALLLSGLLLLSLAAIFGLS
FT                   PHIVTKDSLNLGFFDIFQVFNQTMSSTLAGLGLTLMTIAGFSAYMDHVGASYALFKVFE
FT                   KPLKVVKSPYVLLIVAYFIVQFLVLFIPSHAGLALLLMVTMYPILVRSGVSKLSALSVI
FT                   AICQYIDHGPGSGNVIMASKVAEIDPAIYFVHYQLPTTLPIIIAVGIAIYLCNKFFDKK
FT                   DNFVFNAQEIEKELNENEGKEKELKKPPRIYAILPIIPLVLILGFSSVLDSILVLMGIN
FT                   SAEEVKAAASTAIKMNVPVAMVISTFVAIIFEMIRYKSIVETLNSIMIFFKGMGHLFVI
FT                   TVSLIVCGQVFASGLLSVGFVDTLIEFCKNAGFGVLAIIIAVSILLAVCAFLMGSGNAA
FT                   FFSFAPLIPNIAKHFGVETITMIAPIQIMTGFGRCVSPIAPAILAISAIAKVSPFAVVK
FT                   RTAIPMLVATIVNVIMTYIYL"
FT   gene            1435981..1437144
FT                   /locus_tag="C1336_000290051"
FT                   /note="C1336_000290051 identified by Glimmer3 with a raw
FT                   score of 14.13."
FT   CDS             1435981..1437144
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290051"
FT                   /product="cystathionine beta-lyase"
FT                   /note="C1336_000290051 identified by Glimmer3 with a raw
FT                   score of 14.13. Gene function extrapolated from
FT                   CJJ81176_1392 (CP000538.1) after blastn alignment (97.94
FT                   percent identity over a 1164 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30543.1"
FT                   /translation="MNSKTKLIHCGRGDQGAEVRSVNPTLMRASTILFKDHATWQKYRE
FT                   LRKTDRVLSYGARGTTTNFELEKLICTLEGGYRAQLFPTGLAALAMVLLNYASKDAHFL
FT                   ITDAIYGPVRTICELFLEKMGVEIDFLKADASDVEEKIKPNTKLILCESPGSILYEIID
FT                   LPKLCKIAHAHNIPVAIDNTYSSGYFLNPLELGVDISVIAATKYLSGHSDVTMGIVVIN
FT                   EKEWKNFDKLPETLGFTTSPDDAYLVLRGMRTLDVRMKAHEKSADEIVEFLQSRKEIKT
FT                   IFYPKLKSHPNHEIFMRDHKGANGMITIEFAEGYNKDDAIKFVDKLEYFSIGASWGGYE
FT                   SLATVTTPPRTATDLSARGPFVRFHIGLEDTKDLIADLTQAFDSIKK"
FT   gene            1437154..1438521
FT                   /locus_tag="C1336_000290052"
FT                   /note="C1336_000290052 identified by Glimmer3 with a raw
FT                   score of 14.98."
FT   CDS             1437154..1438521
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290052"
FT                   /product="adenylosuccinate lyase"
FT                   /note="C1336_000290052 identified by Glimmer3 with a raw
FT                   score of 14.98. Gene function extrapolated from
FT                   CJJ81176_1393 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 122 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30544.1"
FT                   /translation="MTGISVFDHRLLADSWSTQEMRAIFCEQNRIQKWLDVEAALAKAQ
FT                   AKLKIIPKKAADEIAKKAHYKFMDMDFIFAEFKKTKHPLVPTVRGLEKACDNNLGEYVH
FT                   FGVTTQDIIDTGLVLQFKEAMTLIKSELKAIAKALAKLAKTHKNTAMMGRTLALQALPI
FT                   TFGHKVAIWLSELERHFERILELEKRLYVGSIVGAVGTKASLSDECNEVEKLTLENLGL
FT                   DVPNISWQSARDRFIELGFVLGNINATFNKIAHEILILSHNEIDEVAEPFGKGQVGSST
FT                   MPHKRNPAVSENAVTVSNAFKANLAILSDIERHEHERDGQVWKMEWKLLPEMFLMLSVV
FT                   LANMKFALSDLEVKKDKMLKNLNTLNGFVLAERVMFALSDHYGKQHAHEIIYENAMLGI
FT                   EKQKTFKEVLLADKRVSKVLKEKEIDALLDATTYVGYAPKLVDEFLAKIKNSAILK"
FT   gene            1438529..1439869
FT                   /locus_tag="C1336_000290053"
FT                   /note="C1336_000290053 identified by Glimmer3 with a raw
FT                   score of 15.76."
FT   CDS             1438529..1439869
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290053"
FT                   /product="MmgE/PrpD family protein"
FT                   /note="C1336_000290053 identified by Glimmer3 with a raw
FT                   score of 15.76. Gene function extrapolated from C8J_1310
FT                   (CP000814.1) after blastn alignment (97.24 percent identity
FT                   over a 1341 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30545.1"
FT                   /translation="MFYSEILVDFIFNLKYENIPNVVVQRAKELMLDSLGTAIAASKEE
FT                   CVLNAFKAFENLSTEKNTPIWVNDQKLDPIYAAMLDGIASHALDFDDTHTEAILHASAI
FT                   LTPLCLSYGFHVSKDAKKITKAFIIGWEIAARVGIASKGTFHKRGFHTTAIAGIFGSVS
FT                   ASAILLDLNKEQIINALGLAGSFASGINEFLSNGSNSKVLHIANAIKNGIMVAHFAKNN
FT                   MSGPLSIFEGRDNIFKCFGIEEECDKTELSKSLGEIWQTMQVSIKPYPSCHFAHGLIDC
FT                   AIALKNDGLKADEIKSIHCFVDEVPISFICDPLEAKYTPNSAYEAKFSMPFLMALGFFD
FT                   SKITLESYENLKRKEVLEFAKKISYEKRKSQGFPKYFPGHLEASLQDGRIIQKDVFINK
FT                   GNFDNPLSFEELKAKFLANAQIYLDDAKANKILDQIINLENLNHFSF"
FT   gene            1439949..1440173
FT                   /locus_tag="C1336_000290054"
FT                   /note="C1336_000290054 identified by Glimmer3 with a raw
FT                   score of 10.11."
FT   CDS             1439949..1440173
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290054"
FT                   /product="putative ferrous iron transport protein"
FT                   /note="C1336_000290054 identified by Glimmer3 with a raw
FT                   score of 10.11. Gene function extrapolated from Cj1397
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 99 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30546.1"
FT                   /translation="MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSSL
FT                   KNATIMVELDTSCVILRSDEAKTIEVNLI"
FT   gene            1440170..1442011
FT                   /locus_tag="C1336_000290055"
FT                   /note="C1336_000290055 identified by Glimmer3 with a raw
FT                   score of 11.08."
FT   CDS             1440170..1442011
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290055"
FT                   /product="ferrous iron transport protein B"
FT                   /note="C1336_000290055 identified by Glimmer3 with a raw
FT                   score of 11.08. Gene function extrapolated from
FT                   CJJ81176_1396 (CP000538.1) after blastn alignment (99.20
FT                   percent identity over a 125 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30547.1"
FT                   /translation="MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAKT
FT                   FYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSAEL
FT                   LSLNKKMLLALNMCDEAKKEGIELDTSILSQEFQSQVVEISAKTKENLELLLQKIIILF
FT                   ENKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIHKFFG
FT                   LPIFLFLMWLLFQLTFSLGQIPMDYIESGFNALGEFVKNNISNTFIASALADGIIAGVG
FT                   AVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPA
FT                   FMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGIYILGAIL
FT                   GLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWHLVWFMVYNKAKMYLKKAGTFILLASL
FT                   LIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKGIEPIFKPLELDWKLSVSLISGLA
FT                   AKEVMISTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIYNPCFAATIVF
FT                   SKESGKLKYTLFLFLFTCTSAYIVAFIGLHIAKILLN"
FT   gene            complement(1442008..1443501)
FT                   /locus_tag="C1336_000290056"
FT                   /note="C1336_000290056 identified by Glimmer3 with a raw
FT                   score of 15.75."
FT   CDS             complement(1442008..1443501)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290056"
FT                   /product="hydrogenase, (NiFe)/(NiFeSe) small subunit
FT                   family"
FT                   /note="C1336_000290056 identified by Glimmer3 with a raw
FT                   score of 15.75. Gene function extrapolated from
FT                   JJD26997_1733 (CP000768.1) after blastn alignment (100.00
FT                   percent identity over a 274 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30548.1"
FT                   /translation="MAKLSNEELKNILENRIKKLENSTLKEDKVINEESVKILARHLSL
FT                   GNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHETL
FT                   MAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKAKAI
FT                   FAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFALFGVL
FT                   PELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKIGCKGPYTYN
FT                   NCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEELKQEFF
FT                   LEVQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYAFIEQNFDENPM
FT                   PSKDFWKYLEMSFILVKGAFLKDKNDFLIAAKNYAFKHASPYDFKLNINAEKPKLDVSK
FT                   SFRMTLIYLCGGLDFEGIAYSILKAFEDNITKISSLKAS"
FT   gene            complement(1443505..1444323)
FT                   /locus_tag="C1336_000290057"
FT                   /note="C1336_000290057 identified by Glimmer3 with a raw
FT                   score of 17.04."
FT   CDS             complement(1443505..1444323)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290057"
FT                   /product="enoyl-(acyl-carrier-protein) reductase"
FT                   /note="C1336_000290057 identified by Glimmer3 with a raw
FT                   score of 17.04. Gene function extrapolated from CJE1587
FT                   (CP000025.1) after blastn alignment (100.00 percent
FT                   identity over a 217 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30549.1"
FT                   /translation="MKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALKKRV
FT                   EPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENSFLET
FT                   SKEAFDIAMQTSVYSLLSLTRALLPILKDKGSILTLSYLGGVKYVPHYNVMGVAKAALE
FT                   SSVRYLARDLGIKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNVSIEDVG
FT                   NSAMYLLSDLANGVTGEIHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG"
FT   gene            complement(1444333..1445004)
FT                   /locus_tag="C1336_000290058"
FT                   /note="C1336_000290058 identified by Glimmer3 with a raw
FT                   score of 16.65."
FT   CDS             complement(1444333..1445004)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290058"
FT                   /product="triosephosphate isomerase"
FT                   /note="C1336_000290058 identified by Glimmer3 with a raw
FT                   score of 16.65. Gene function extrapolated from C8J_1315
FT                   (CP000814.1) after blastn alignment (99.26 percent identity
FT                   over a 672 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30550.1"
FT                   /translation="MIFAANLKCNHTRASFKIYAEILNKTMGAKCDDIIVFPPSVAFLE
FT                   NENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKFDF
FT                   AKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEMIDLNYEKLIIAYEPIYSIGTGVSAQ
FT                   STDIAKVLEFLASLTKAPLLYGGSVNENNIKEILSVKHCGGVLIGSAALKVENFIKLIK
FT                   G"
FT   gene            complement(1445001..1446203)
FT                   /locus_tag="C1336_000290059"
FT                   /note="C1336_000290059 identified by Glimmer3 with a raw
FT                   score of 16.19."
FT   CDS             complement(1445001..1446203)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290059"
FT                   /product="phosphoglycerate kinase"
FT                   /note="C1336_000290059 identified by Glimmer3 with a raw
FT                   score of 16.19. Gene function extrapolated from C8J_1316
FT                   (CP000814.1) after blastn alignment (98.59 percent identity
FT                   over a 1203 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30551.1"
FT                   /translation="MSDIISIKDIDLTKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPT
FT                   IRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIIMAKDVIGEDAKTKA
FT                   MNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAITKF
FT                   FDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIG
FT                   GGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDAP
FT                   MKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSH
FT                   YISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVKALRSKEN
FT                   E"
FT   gene            complement(1446206..1447204)
FT                   /locus_tag="C1336_000290060"
FT                   /note="C1336_000290060 identified by Glimmer3 with a raw
FT                   score of 14.73."
FT   CDS             complement(1446206..1447204)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290060"
FT                   /product="glyceraldehyde 3-phosphate dehydrogenase"
FT                   /note="C1336_000290060 identified by Glimmer3 with a raw
FT                   score of 14.73. Gene function extrapolated from C8J_1317
FT                   (CP000814.1) after blastn alignment (98.20 percent identity
FT                   over a 999 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30552.1"
FT                   /translation="MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYLF
FT                   KYDTVHGEFKGSVNSEGDDLVVNGKKIKVFKSRNVKDLDFAKYGAQIVLECTGAHLTMA
FT                   KCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCRVLQ
FT                   DNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVMPELN
FT                   GKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAATTNLKGILMVDDDERVSS
FT                   DFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA"
FT   gene            1447264..1447809
FT                   /locus_tag="C1336_000290061"
FT                   /note="C1336_000290061 identified by Glimmer3 with a raw
FT                   score of 15.18."
FT   CDS             1447264..1447809
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290061"
FT                   /product="nicotinate-nucleotide adenylyltransferase"
FT                   /note="C1336_000290061 identified by Glimmer3 with a raw
FT                   score of 15.18. Gene function extrapolated from C8J_1318
FT                   (CP000814.1) after blastn alignment (96.88 percent identity
FT                   over a 512 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30553.1"
FT                   /translation="MKIALFGGSFDPPHNGHNSVVLEALEKLDIDKLIIMPTYINPFKQ
FT                   SFSADEKQRFLWVKKLWGHLPKVEICDFETKQKRPVPSIESVKYLYKLYNPSKFYLLIG
FT                   ADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNTNEV
FT                   CEEIKDEVKKYYEKLQKN"
FT   gene            1447837..1448163
FT                   /locus_tag="C1336_000290062"
FT                   /note="C1336_000290062 identified by Glimmer3 with a raw
FT                   score of 13.69."
FT   CDS             1447837..1448163
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290062"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290062 identified by Glimmer3 with a raw
FT                   score of 13.69. Gene function extrapolated from C8J_1319
FT                   (CP000814.1) after blastn alignment (99.39 percent identity
FT                   over a 327 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30554.1"
FT                   /translation="MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGERH
FT                   ALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLENLK
FT                   KDRV"
FT   gene            complement(1448194..1448571)
FT                   /locus_tag="C1336_000290063"
FT                   /note="C1336_000290063 identified by Glimmer3 with a raw
FT                   score of 18.51."
FT   CDS             complement(1448194..1448571)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290063"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290063 identified by Glimmer3 with a raw
FT                   score of 18.51. Gene function extrapolated from C8J_1320
FT                   (CP000814.1) after blastn alignment (97.30 percent identity
FT                   over a 185 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30555.1"
FT                   /translation="MKKILVLLSLCAFAFGASECDRKIDRINKEISFSKAHNDTARTLS
FT                   LELALKQVQNDCVKDPMFYDKKLEAKKLKEQEVEKIEKELDALKEQKDYMSKAEYKAKK
FT                   EALKEQKEKIKKEIKEYIDNL"
FT   gene            complement(1448619..1449989)
FT                   /locus_tag="C1336_000290064"
FT                   /note="C1336_000290064 identified by Glimmer3 with a raw
FT                   score of 16.32."
FT   CDS             complement(1448619..1449989)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290064"
FT                   /product="phosphomannomutase/phosphoglucomutase"
FT                   /note="C1336_000290064 identified by Glimmer3 with a raw
FT                   score of 16.32. Gene function extrapolated from C8J_1321
FT                   (CP000814.1) after blastn alignment (98.83 percent identity
FT                   over a 1371 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30556.1"
FT                   /translation="MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCENVSV
FT                   GYDARYSANELFNYLVSGFNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSHNP
FT                   KDYNGFKITINKESFFGVELKEFSKEVYKHLDDDIEENLEVEKYDILSLYVKFMCEQFS
FT                   FLKDFNYKFGVDCTNGAAGVVIEPLIKALNLKAHVMFAKPDGQFPNHAPDPTEEENLSA
FT                   IREFLNQNQDYSLAFAFDGDADRMVALSKTHVFCGDELCYLFAKNIPNPRILGEVKCSK
FT                   NLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDGIYAFLR
FT                   ALELVYKGFDLESMIKALPKLYTTPEIKIPVNEEEKFKLVEEFQKEIEKGALKGVKSLC
FT                   EIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESMVFTLFDDIKARLKN"
FT   gene            1450111..1450647
FT                   /locus_tag="C1336_000290065"
FT                   /note="C1336_000290065 identified by Glimmer3 with a raw
FT                   score of 15.23."
FT   CDS             1450111..1450647
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290065"
FT                   /product="possible flagellar protein"
FT                   /note="C1336_000290065 identified by Glimmer3 with a raw
FT                   score of 15.23. Gene function extrapolated from C8J_1322
FT                   (CP000814.1) after blastn alignment (99.19 percent identity
FT                   over a 495 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30557.1"
FT                   /translation="MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSSS
FT                   SDESEVKEAPKEETKADKPKISAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVKCT
FT                   IELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINEILT
FT                   DGFIKNVYFTDFVVS"
FT   gene            1450648..1450995
FT                   /locus_tag="C1336_000290066"
FT                   /note="C1336_000290066 identified by Glimmer3 with a raw
FT                   score of 12.66."
FT   CDS             1450648..1450995
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290066"
FT                   /product="4'-phosphopantetheinyl transferase"
FT                   /note="C1336_000290066 identified by Glimmer3 with a raw
FT                   score of 12.66. Gene function extrapolated from C8J_1323
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 77 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30558.1"
FT                   /translation="MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLAG
FT                   LWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSISHD
FT                   NGFAIAIVAIV"
FT   gene            complement(1450996..1451415)
FT                   /locus_tag="C1336_000290067"
FT                   /note="C1336_000290067 identified by Glimmer3 with a raw
FT                   score of 12.62."
FT   CDS             complement(1450996..1451415)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290067"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290067 identified by Glimmer3 with a raw
FT                   score of 12.62. Gene function extrapolated from
FT                   CJJ81176_1409 (CP000538.1) after blastn alignment (99.29
FT                   percent identity over a 420 bp alignment) - for clarity,
FT                   the original product name 'membrane protein, putative' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30559.1"
FT                   /translation="MKRVRTKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLGY
FT                   LFIVIIGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVIKI
FT                   TDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGK"
FT   gene            complement(1451412..1452773)
FT                   /locus_tag="C1336_000290068"
FT                   /note="C1336_000290068 identified by Glimmer3 with a raw
FT                   score of 13.79."
FT   CDS             complement(1451412..1452773)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290068"
FT                   /product="putative cytochrome P450"
FT                   /note="C1336_000290068 identified by Glimmer3 with a raw
FT                   score of 13.79. Gene function extrapolated from C8J_1325
FT                   (CP000814.1) after blastn alignment (98.82 percent identity
FT                   over a 1353 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30560.1"
FT                   /translation="MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYVK
FT                   MPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRELL
FT                   RPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAVIEVDEAMTFITADVIFRTIMSSKL
FT                   DEEKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYILGDRKRAKAGDVIRQVLSDIIK
FT                   PRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSLTWTLY
FT                   LLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFFAREAKK
FT                   DTQVRDKLIKKGSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPFGVGERIC
FT                   IGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSKRKL"
FT   gene            complement(1452770..1453717)
FT                   /locus_tag="C1336_000290069"
FT                   /note="C1336_000290069 identified by Glimmer3 with a raw
FT                   score of 9.69."
FT   CDS             complement(1452770..1453717)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290069"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000290069 identified by Glimmer3 with a raw
FT                   score of 9.69. Gene function extrapolated from C8J_1326
FT                   (CP000814.1) after blastn alignment (98.86 percent identity
FT                   over a 176 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30561.1"
FT                   /translation="MQTKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIKF
FT                   GKESIYQLITGYYPFFYVLFSLLFSLVLVFGSFAFLQNYMHFSLAIIIGCFLGFLLNHF
FT                   LFKLGKKLAVFWIARICAFCATWQDKKTGAMQERIKLFANVIVEKLKQNESKQDYELIL
FT                   VAHSVGTIVCIEVLEYILRQNLDLSLLRKLKILTLGECIPLVSYQKKADEFRKKLEFVS
FT                   RFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKIKRDKN
FT                   KAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI"
FT   gene            complement(1453963..1455147)
FT                   /locus_tag="C1336_000290070"
FT                   /note="C1336_000290070 identified by Glimmer3 with a raw
FT                   score of 9.77."
FT   CDS             complement(1453963..1455147)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290070"
FT                   /product="capsule polysaccharide export protein KpsS"
FT                   /note="C1336_000290070 identified by Glimmer3 with a raw
FT                   score of 9.77. Gene function extrapolated from
FT                   CJJ81176_1412 (CP000538.1) after blastn alignment (98.30
FT                   percent identity over a 648 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30562.1"
FT                   /translation="MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLN
FT                   FNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKIDAILMYNDCRIIHAKAIKVAKELG
FT                   IEVWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKFMAF
FT                   DAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEK
FT                   KYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYS
FT                   KLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTKVCGNAF
FT                   YDFEGLSYPKKLQFFWREAHAYKPNPILVCNFKKYLLQTNQFNGNFYKNFFLDK"
FT   gene            complement(1455144..1457213)
FT                   /locus_tag="C1336_000290071"
FT                   /note="C1336_000290071 identified by Glimmer3 with a raw
FT                   score of 13.27."
FT   CDS             complement(1455144..1457213)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290071"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290071 identified by Glimmer3 with a raw
FT                   score of 13.27. Gene function extrapolated from C8J_1328
FT                   (CP000814.1) after blastn alignment (95.82 percent identity
FT                   over a 1100 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30563.1"
FT                   /translation="MKFYTTSRKLKKNIKNFYKMVACSTDKNIVKEDIFIGWGRKKSGL
FT                   KAMNLAKKYKAKFILLEDGFIRSLNLGVENSPSFSIVKDDIGVYYDATAPSKLENLLNT
FT                   YEFKDEEIKQAKKAIELIKKYKISKYNNNLDIPDDYFQKDEKRVLIITQTANDASLEFG
FT                   FAKDFKTVDMIKDAIKENPDSKIYIKIHPDVLSGKKQSDLVINFLPKECILITENFNPI
FT                   ALLEFFDKVYTKTSGMGFEALIQECECICYGMPFYAGWGLTKDKLECKRRMQKRSLEEV
FT                   FYAAYILYSEYFNSYLNQKSNIFDTIQTLAKYKDIEKVNSNRLFMLGFTLWKRHFIKPF
FT                   FKAKDNEIIFLNSIKSLVRYKLKEDDKFFIWGRRIDYNILKSTLIKKAQDENLSHFTPK
FT                   ISLVEDGFIRSISLGSDLTRPFSLIVDDKGLYIDPNKPSKLEELLQNEIFDENMLNRAK
FT                   NIIKILLENRFSKYNGLKHEDLKINAKIGQKIILIPAQVEDDASMILGGFGLSTLDLLK
FT                   EVRAKNQDAYIIFKPHPDVLSGNRVGLKDETLILEFCDEIVKDCSIDSVIKIADEIHTI
FT                   TSTSGFDALLRAKKVFTYGIPFYAGWGLTKDKHKCERRTRKLSLEELVAGALITYPRYI
FT                   NPKTKTLCEIEVCLDIMLNLQKDYFSKKHIKLAIDFKTFMLRKIRRFYEFLAKK"
FT   gene            complement(1457255..1458748)
FT                   /locus_tag="C1336_000290072"
FT                   /note="C1336_000290072 identified by Glimmer3 with a raw
FT                   score of 3.12."
FT   CDS             complement(1457255..1458748)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290072"
FT                   /product="capsular polysaccharide biosynthesis protein,
FT                   putative"
FT                   /note="C1336_000290072 identified by Glimmer3 with a raw
FT                   score of 3.12. Gene function extrapolated from CJE1604
FT                   (CP000025.1) after blastn alignment (94.27 percent identity
FT                   over a 157 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30564.1"
FT                   /translation="MNIIIPATGIGKRFKEAGYKDLKPFIKVMEDKVILDYVVECFDVQ
FT                   NDIFYFIVQECEKSKFEDFVLSRKIKAKIIIYKREKLGPAGSLYGVVSQLQDILDEEVI
FT                   VSYCDFGQEWDYKDFLQFVQENPEAQAIIPCYTGCHPHLLPLENVYAACKVYDNTYKVY
FT                   EVIEKYNSKNKFEEYYSSGIYYFRTLKLAIEAIKKQIEAKDMVSGEYYVSVTNNYLENV
FT                   LCYPLIEKFYQFGTPKDFEYVKEKLNSQDVNNEKIKIQNTVILSAGRGERFLNLNFNQP
FT                   KPFLPLGKTSIIESIIDTLKDVETKIICVGAQDHEKYWENIKQEIRFVKPNKIGAAYSY
FT                   KESCGNLSGDVLILPCDLIAKHINKDFKRLQKECEAIVFATHASKYNVNNPHYFTWVEG
FT                   ENNKIDNIFVKNRSNDANLVMIGSFYFKENSLLLEYMDKIFQKNIKTNGEFYIDNVFEL
FT                   LIKKYKIGYMIVDNYFSFGTPEEYLENKYWYNISKGSVR"
FT   gene            complement(1458750..1459475)
FT                   /locus_tag="C1336_000290073"
FT                   /note="C1336_000290073 identified by Glimmer3 with a raw
FT                   score of 4.81."
FT   CDS             complement(1458750..1459475)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290073"
FT                   /product="capsular polysaccharide biosynthesis protein,
FT                   putative"
FT                   /note="C1336_000290073 identified by Glimmer3 with a raw
FT                   score of 4.81. Gene function extrapolated from CJE1605
FT                   (CP000025.1) after blastn alignment (90.40 percent identity
FT                   over a 698 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30565.1"
FT                   /translation="MIYSKEKLDECIKDYQELCKIFGNILDAPSKGGNISIKNDEYFII
FT                   KASGEDLKKEHKISIFKNNINSLSYCKDYCEDIVKPSMEIKMHIVFKNKYVAHYHPVYI
FT                   LPYLCAKEYKFKNYKAIDFALPGNDLYEALRKNYSYQEKGIILLRNHGVVVYAEQIQDI
FT                   IELYNQLKSEFFEQNDFVYTPDDAVDKTNEELWLFRNVMENIAIKKQINLNPLKVSEVD
FT                   KLLNLPDEQYRKKIMESES"
FT   gene            complement(1459462..1460763)
FT                   /locus_tag="C1336_000290074"
FT                   /note="C1336_000290074 identified by Glimmer3 with a raw
FT                   score of 6.02."
FT   CDS             complement(1459462..1460763)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290074"
FT                   /product="haloacid dehalogenase-like hydrolase
FT                   domain/phosphoribulokinase domain protein"
FT                   /note="C1336_000290074 identified by Glimmer3 with a raw
FT                   score of 6.02. Gene function extrapolated from CJE1606
FT                   (CP000025.1) after blastn alignment (96.00 percent identity
FT                   over a 300 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30566.1"
FT                   /translation="MFNFKKIAEKYKLIMVDIDNTLFNYTFAHKNALEVVMKQYGFTLE
FT                   DYDLAKKMIAKRGLSANHHKKELYFKLICENKNIHFSKASEMFKLYISIFTRNLKVDKT
FT                   MFEFLYFIKSLNKKVIAITNFYFIEQIHKLNCANLTNMIDYLVCSEEFELEKPNKALVN
FT                   RALELYRELVDEEEIVMIGDSIADDFLGGGYRINYYPYNCSKLLISISGKSGSGKTTLS
FT                   NAIDEIHKSFIISTDGYHKYERHSKMWERVTHYNPEANNLIQLAIDIKHIYQDIGNKLY
FT                   IPLYDHKNGVIVKSDEIKIKDLDIVIIEGLHTLYQEVIGDFVKIKIYIDSDEADRQKIN
FT                   RDSKERNYSHSKIINTIQKRKEDYKKYLEKQKDNANFLIIVRDGVFKIHLRDILLSDYL
FT                   QKEYTGRYEDLIQTVKDIFSLILQNRWVRKNDIQ"
FT   gene            complement(1460756..1461349)
FT                   /locus_tag="C1336_000290075"
FT                   /note="C1336_000290075 identified by Glimmer3 with a raw
FT                   score of 5.04."
FT   CDS             complement(1460756..1461349)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000290075"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000290075 identified by Glimmer3 with a raw
FT                   score of 5.04. Gene function extrapolated from CJE1607
FT                   (CP000025.1) after blastn alignment (89.81 percent identity
FT                   over a 432 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30567.1"
FT                   /translation="MIFLHRQNNLEFSIENYGIEIDLRYNEKLVLNHDLLEKKSVYPFL
FT                   KEKIQFMKNIPIICNVKESGLEEKTIELLGNNFEYYFLDSQIPDILRLSKNGHQGKFII
FT                   RISDVEFYNKRLMEISKPKYVWIDYSQFFNFNLKDYQEFIYNVKPKLEQVEPILVSPEL
FT                   YDLSYIELIKPIQNILPKGFSVCTKKPELWSMYV"
FT   gap             1461378..1462001
FT                   /estimated_length=624
FT   gap             1463641..1464024
FT                   /estimated_length=384
FT   gene            complement(1464704..1465348)
FT                   /locus_tag="C1336_000310000"
FT                   /note="C1336_000310000 identified by Glimmer3 with a raw
FT                   score of 7.38."
FT   CDS             complement(1464704..1465348)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310000 identified by Glimmer3 with a raw
FT                   score of 7.38. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30458.1"
FT                   /translation="MKKYNIVLLGGSNSVMVNGLQKGLRQENINLTNLALGGSSSLQNL
FT                   YELKRKRNQEYLENADLIISESNINDRAAAFDVVLKHTDWLYSELASMNKKILIILMPH
FT                   ILFKKNKGCNNIHKFHIAKYGFNIIDLQEYYERFNLCDFFHNIDESHQMGFVMAQLAKN
FT                   IINNISYFLYPKKIYDKRFFLKFAFQVKCYQMVINLFKIIHFMKNIAQNQP"
FT   gene            complement(1465345..1467342)
FT                   /locus_tag="C1336_000310001"
FT                   /note="C1336_000310001 identified by Glimmer3 with a raw
FT                   score of 9.41."
FT   CDS             complement(1465345..1467342)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310001"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310001 identified by Glimmer3 with a raw
FT                   score of 9.41. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30459.1"
FT                   /translation="MFQSIDEKIQEQLNLWNFDAIEILYEKKLDSLENEYVDFLFQIGK
FT                   FEKIYNFLKVFQEIPTWWEMTRISKDYNFFSFLEKLLQAVQFDFKDMSFEKRYLACYIL
FT                   NSKISKQELNGKFCHELFYTSIVYMERNKYKWGVYKGACGVISTAYYIKKSIDYFFYSN
FT                   DDDFLDRMQDYMFILQDFMKQNFYGASICYEQISFLLKKKKLNIAYTMPNVAVLVTGAV
FT                   RGKKWFESLKFLKDQVVDPLNADVFLFSWNKKMLWPSIRNRSNWVYRRIPEVYNNTPEQ
FT                   IKNFNEFTKCFPNVYNKLSEDFSIPFSKDELEQLNVFFNDIYLEDEKSFIAYYQKCGEL
FT                   NNLHKMLYGRKIAFELMEKYEKRFQKKYDFVLIVRPDLDYPRIDSAILEKINIGNVIAT
FT                   HELWPHHKEVLDYFFMGNREVIKKICDIWDAIQDTRLDFFRDSFRKDFHAQEALHKWLV
FT                   FNNIKSIEPHFAYNVNVARSISSKSICFPNLQDELQKDILNLKKQNYSSDIIEQNICFF
FT                   SDVVQFYGQVNICENDLLDRSRLYSAKARVQNHLAYKLGQVMIIYSKSIFGYLKMPYIL
FT                   NKVYKKHQIEVKEYNEKIKTMSFLKIPSMECCEDYEEALKEKQCLTYRLGEELIKANKS
FT                   KYKLGYINFFISTYKNVKKFNSYQGKSNSK"
FT   gene            complement(1467352..1470621)
FT                   /locus_tag="C1336_000310002"
FT                   /note="C1336_000310002 identified by Glimmer3 with a raw
FT                   score of 9.37."
FT   CDS             complement(1467352..1470621)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310002 identified by Glimmer3 with a raw
FT                   score of 9.37. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30460.1"
FT                   /translation="MTLEQISELVKSESVKIVSFDIFDTLLVRPCIIPSDMFKIVAIRA
FT                   GYDESFVKIRQLAEQYARENKPFYEDDIAIDDIYKYLHLNFEFSVEECEKLKTIEMEVE
FT                   FDYLYSKNSIQKLFFEALESHKKVIIVSDMYLPKKFLEKVLEKNNYKGYDELFVSGDLK
FT                   LSKGSGRLFDFIIAKFEKMGFEKNSILHIGDNPRADVNIPNSKGIKGIRIVNSSDRFNM
FT                   LHLLDSIQYSKMAFTDNRFILGFMINKVFDHISRPYDKEHSMFNGEIENFTNLLLTPIF
FT                   YAFTYWLLEDCKKNNVDTLLLVYRDGYLIEKILNIFLKDKNTQFNIKPLRLSRKALYAF
FT                   DGLSKKECKKKIVAIPVNTTMTIESFLKLRFLMNDSQVIEVSEKYNFVLDAYVGDVKNQ
FT                   LIIADQVYEYFFNNAKEKTEIIKDYCRKVIVDGKNIAVFDVGYSGRIRKFLKDVLNIET
FT                   TAYHMFKHFGFKSDDGIKTYFDFSNTFFQHIHVIHNQIFEDILSEPVGTLQEIIKKNDK
FT                   FDFILDDKYQAQDEILKIQERILSNIEEFYDLFKKDIGALNIHGFDFYHILTRFLWQPK
FT                   AKDMNVFKNLTFKDDFIMGDNIDGYSRWFASKKNFQKSNEYCTVRKIIKRYYKKFKNFS
FT                   FFQNFKDKLELKKQKQSLQKNIQGLFEFSGKCFDDALEKKDFIFLGHFASFDKGVCRYI
FT                   SNAIQSKSVLVVSTTPWLKKEFVQNKLKMPSIIVPKATFNRGYDRNVDLNNLTESEKYI
FT                   LAQNPRLKEISLRMKLQYKDMGKNYPDKMAIFLFQYFDILLEKTSPKKAFIWNKFNATH
FT                   EIFHLVCLKRNIQCVFMEFGVIPGTFNFDLQGQMGESWIANHTSDFNDLTINSNDLENA
FT                   KKVLKYIYKEKLCRNLQPKNNLIDNIKKEIKKDCPTIVYFGQNDFEAGMIPYNQHVVKY
FT                   HSPWSVDSNDACRVLSEICIKNDWNFIYKPHPNLEWLEEKKSEILDARGVDIHELIDLA
FT                   DVVVTILSQSSYEALIYDKPVVMLGYTHLKHKNCTYEAFAKDDVEQVLDKAIKDGFTEE
FT                   MRENFHSHIARLLKYYLYDDYVARKFKYGKKIEDFQNEFLN"
FT   gene            complement(1470602..1471351)
FT                   /locus_tag="C1336_000310003"
FT                   /note="C1336_000310003 identified by Glimmer3 with a raw
FT                   score of 11.81."
FT   CDS             complement(1470602..1471351)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310003 identified by Glimmer3 with a raw
FT                   score of 11.81. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30461.1"
FT                   /translation="MKELEIAKLACYKAGDFLLNLKEKKVNSNDIKDIKLQADLDSEEI
FT                   ICKVLSDAFSYPILSEESYRVSDEEKKGMFWIIDPLDGSLNFNQDIPLCCISIALYEND
FT                   RPILGVIYDFNRDEMFSGIVGVGAWLNDKKIIPFYNTKDKSQAILATGFSSYMNYDKDG
FT                   LMEFISHIQEFKKIRLLGSAALSLAYVACSRIDAYYEKDIAIWDVAAGIAILESLGNIT
FT                   YSFFQNELKCLVRVENKLKEKNDIRAN"
FT   gene            complement(1471348..1471842)
FT                   /locus_tag="C1336_000310004"
FT                   /note="C1336_000310004 identified by Glimmer3 with a raw
FT                   score of 8.40."
FT   CDS             complement(1471348..1471842)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310004 identified by Glimmer3 with a raw
FT                   score of 8.40. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30462.1"
FT                   /translation="MAIITNVHQVHSFLKDQVALEYLYSVCNSTHQNRLRILELPLKSC
FT                   KKENISETFFVLEQNYITKPRNECFWESHKKYIDIQLHLKGIEQMEFIDVSHLEISEEY
FT                   NQEKDLIIYNDNRCSNKIIMQKNDIAIFFPEDAHLGMAMYSENPSHILKTVIKYPLGLW
FT                   K"
FT   gene            complement(1471842..1472774)
FT                   /locus_tag="C1336_000310005"
FT                   /note="C1336_000310005 identified by Glimmer3 with a raw
FT                   score of 11.17."
FT   CDS             complement(1471842..1472774)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310005"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310005 identified by Glimmer3 with a raw
FT                   score of 11.17. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30463.1"
FT                   /translation="MENKKIAVTAVAFSKNQYLREKLNSHFKYVQFNDSLKRLSQDELK
FT                   CFLKDVDGAIVGLDEIGEDVLKEVKNLKVISKYGVGLNNIDFNSAEKYQVKVVYSQGVN
FT                   KRSVSELVLGNMLSLMRNSYITSNKLKTQEWDKNGGVQLSGKSVGVIGVGNIGKDLIGL
FT                   LKPFGCTIYVNDIIQQDEYYKRNNLIEATKEEIYKKCDIVTIHTPSTNLTKNMINKDIF
FT                   TMMKKEAYFINTARGDIVVQEDLKWALKEKIIAGAAIDVYEQEPPKDYDFISLPNLICT
FT                   PHIGGNAKEAVLAMGESAIKNLVDYFKEA"
FT   gene            complement(1472764..1473474)
FT                   /locus_tag="C1336_000310006"
FT                   /note="C1336_000310006 identified by Glimmer3 with a raw
FT                   score of 5.85."
FT   CDS             complement(1472764..1473474)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310006"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310006 identified by Glimmer3 with a raw
FT                   score of 5.85. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30464.1"
FT                   /translation="MDKNKYIAEIPARLGSQRVKQKNLRLIEGEPMIAYAIKACKNANS
FT                   ISEVYVNTESDLIGQVALDYGVKYYKRREELALNHVVSDQFNYDFLKKIECEALVMVNP
FT                   VSPLVESVDIEEAINFFEINQLDSMISVKDEKLQCFYQERALNFNKDGLLPMTQNIDPV
FT                   RVCVWTICIWRRESFIKSYEKNGYAVFNGKCALWPINPLKSIKISYEEDFLLAEQLLRA
FT                   RRYCNKNEVRYYGE"
FT   gene            complement(1473467..1474474)
FT                   /locus_tag="C1336_000310007"
FT                   /note="C1336_000310007 identified by Glimmer3 with a raw
FT                   score of 6.49."
FT   CDS             complement(1473467..1474474)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310007"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310007 identified by Glimmer3 with a raw
FT                   score of 6.49. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30465.1"
FT                   /translation="MIKIGIAGFGKIGQLRAKKILEKNYAQIVAVYDIEKPLNLGSDII
FT                   FCYSFDELLSQDIDAIFICTFVDSLAEYTKKALLAKKHVFCEKPPAKTSKELQEVIKVE
FT                   QNSRMILKYGFNHRYHYSVMEAKKIIDSKSMGKLLWMKGTYGKAGSIDYHKNWRNYKNK
FT                   SGGGILIDQGIHMLDLMRYLSGEEFEKINSFVTNAYWDIEVEDNAFAIMKTYSNTIAML
FT                   HSSATHWKHKFLLEMYFEEGYINLDGILSGTRSYAPETLVVGRREFEDITFAMGKPKEN
FT                   ITWFENDDSWEIEIKEFLEAIDDKGKIINGTSLDALKTLLLIEKIYNNSGFYNG"
FT   gene            complement(1474478..1475050)
FT                   /locus_tag="C1336_000310008"
FT                   /note="C1336_000310008 identified by Glimmer3 with a raw
FT                   score of 10.21."
FT   CDS             complement(1474478..1475050)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310008"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310008 identified by Glimmer3 with a raw
FT                   score of 10.21. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30466.1"
FT                   /translation="MKNIEDFAKEYILKLNQLLSEIDMKVIVDIVDLFERVSKNKNTIY
FT                   IIGNGGSAATASHWANDFSAGLKRRNILSIDMKSLADNTPVCTAIANDIGYENIFKLQL
FT                   QDVLTKDDVLFAISCSGTSPNIVNAVKYAKDIGAKVVGATGFDGGDLLKLSDIKFHVQT
FT                   PKGEYGLVEDMHMILDHIIYSYYMQKA"
FT   gene            complement(1475047..1475754)
FT                   /locus_tag="C1336_000310009"
FT                   /note="C1336_000310009 identified by Glimmer3 with a raw
FT                   score of 7.38."
FT   CDS             complement(1475047..1475754)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310009"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310009 identified by Glimmer3 with a raw
FT                   score of 7.38. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30467.1"
FT                   /translation="MKKNNIQQWCDLSYSLDSRRKFYKDSKILITRKEKYSNNLVNRET
FT                   EIFINSHMGTHIDFPAHCIRNGNFGEKYSLDFFYSRKIFVVNIDLSKKKIPKLTYEHFY
FT                   KNVKIPKQIEILLVNTNFYTLRNDERYIWNSPIVSSKIPLYFKKNFPNIKIIGFDIISL
FT                   TSQLDREEGKRCHFNFLSKKYGREILVIEDMNFSNLRKNDIIKEILISPLKFEYMDGSP
FT                   CSIMAKIERSNKK"
FT   gene            complement(1475751..1477346)
FT                   /locus_tag="C1336_000310010"
FT                   /note="C1336_000310010 identified by Glimmer3 with a raw
FT                   score of 7.68."
FT   CDS             complement(1475751..1477346)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310010"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310010 identified by Glimmer3 with a raw
FT                   score of 7.68. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30468.1"
FT                   /translation="MIHNNVYPMKYIIDILQKNNIDFYENIYSYKDFYRKDYSNFLYFG
FT                   KFLFETQNINQKEYRFRYINPKDVFVKYNPKLCGIYRNESLESSIILGLYIKKWILSDK
FT                   HIDNYWESFGYFYGGPLCYGLANFVYDEAVKHDLKEFIFVARDGYVIEKIFNFLQQQFK
FT                   TNIKTEYIYASRALKVLSKIDLNSNHLPWDDKISSLFDLCTKALDDFKKYQSKSISKKI
FT                   QLDLLKRYSDKINYLSSKIEKSFVKYIKKYSFKQNKIGLFDFVTFEFSSLDILQSVLKK
FT                   KFFYAYYFYIIPNSKNFFLSNVANVQSYSTIFFKNHLIGEFLVTAPELPISFIKDGKIN
FT                   RIDNIHEQYKVEIYKIISQFELEFSKDLILTFGDFRIFFRSDEVVRIINYFIDNIDYKD
FT                   RYYFKDIYHSENSAHTKYVRIFNQCASATDSVRNSLSYRIGLRIMQSKTLKKILTLPFS
FT                   LINIIYQDYIDKKIKSELEVKNINFKTPKVEEHDFIESKKNKQHLAYQLGECFLKHPIL
FT                   FIFYFINIYIKWKK"
FT   gene            complement(1477436..1478626)
FT                   /locus_tag="C1336_000310011"
FT                   /note="C1336_000310011 identified by Glimmer3 with a raw
FT                   score of 5.33."
FT   CDS             complement(1477436..1478626)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310011"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310011 identified by Glimmer3 with a raw
FT                   score of 5.33. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30469.1"
FT                   /translation="MEKDNSMIFSYHIPIVFAVDDNYLPYMSIALNSLVDTVSNCYQYN
FT                   IFVMHLNIDSERLNRLKENIKNNNVTIEFINLNQYLKNIFKEYGNIFYEKSYFTTAMYY
FT                   RIFIPEIFSNFKKVIYCDSDVIFKADISHLFFTDLNNKEIGACRDIAALYAYRKRETIW
FT                   QQNIGNNFDKINFRSISDYFNSGVIVFDIVKCIQMKTVSKCLTVIKNIDNLYFPDQDVL
FT                   NIVFCGHVHFLPLEWNFLWTTYIEYRDNFMYLPKKIINEIYRAKTKPKIIHYISETKPW
FT                   KDKNSFFVEWWKFPRKNLFYGEILCKKLMIQNNYVNLNQSSCIYVDILDCLLLLPYFNF
FT                   DDLYKHIEQLYNLENFALYRKNAIIQAESYYKKKSFLLNIDEIYFFMPKKIYILRI"
FT   gene            complement(1478651..1480576)
FT                   /locus_tag="C1336_000310012"
FT                   /note="C1336_000310012 identified by Glimmer3 with a raw
FT                   score of 7.67."
FT   CDS             complement(1478651..1480576)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310012"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310012 identified by Glimmer3 with a raw
FT                   score of 7.67. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30470.1"
FT                   /translation="MPTFNREKYIKFAIESILNQTFTSFEFIIIDDCSNDATYDIIKEY
FT                   AKIDQRIIVLRNKANKGIVFSLNKGLQLSRGKYIARMDDDDISMPTRLEKQFQIMEKDD
FT                   SIIVAGTYFKYIGRNPDSFANWVNVYEHDMIKIKMMFECPICHPSVIMRKNFFRKYNLK
FT                   YSQEYQYAEDYKLWLDVLQNGGKIINIPEILLLYRVTNLSISRNKKTSNLQQIRSRLIL
FT                   FKCRELFLDAKSKDLLRDFCNIPMELSKKQEIYEKIQRIQIAYQGNRDSVQKILQYFCG
FT                   VFSDIHICFIFDNIQLQGVINGIFSILKNSSELDRFHFYILHNGSFQSEFSILKLRRIK
FT                   DFELSIIDICKINNENISQYKTLYFKFLFALTQLKIEKCLLISSRFVVMDSLNFFWNTN
FT                   FEKKTIIATSSCNLEKIELFRDEFLIQENFESNIIMINLEYLLKNNFLKEILFYDKTFY
FT                   FHNEVLSKEEIIMNLIFKNNWKKISLRYNVQDNLKFLNNLHPILFSYQKLKDVRSKIYI
FT                   DYIKENHYMRIEDFFEDNLINNLNYLSAVDIIKNSLSYKIGMRIIQSKTLSKILILPFA
FT                   LCNIIHQDYIEKKIRKNLEYVNPIFSMPNIEECYDYLEGEKIKKHLAYQLGECFLEHPV
FT                   FLYCIL"
FT   gene            complement(1480600..1481994)
FT                   /locus_tag="C1336_000310013"
FT                   /note="C1336_000310013 identified by Glimmer3 with a raw
FT                   score of 7.76."
FT   CDS             complement(1480600..1481994)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310013"
FT                   /product="putative sugar transferase"
FT                   /note="C1336_000310013 identified by Glimmer3 with a raw
FT                   score of 7.76. Gene function extrapolated from
FT                   CJJ81176_1433 (CP000538.1) after blastn alignment (89.47
FT                   percent identity over a 152 bp alignment).; overlaps
FT                   another CDS with the same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30471.1"
FT                   /translation="MNQTKTVGIVIPIYNVEKYLRECLNSVVNQTYKNLQIVLVNDGSI
FT                   DENSLSIAKEYTLKDERFILIDKENGGLSSARNVGIEFFENKYIFETKTQKYKSDSLVE
FT                   FELKNKENLYKINKIYKSSKSFYDIEQIQNFSSPRIDYIIFLDSDDYWELDCMEECVLR
FT                   MNGVDVVWFDYKLFFQDIRKKKYKTQMEYFDFKDGTIIEPRHWIDRAKERNIFYFWFAW
FT                   QGMINFNFLHKMNLKFINGIFAEDCHFGVLLFAFSKKIFVYSKKKYIYRIRESSLMNFT
FT                   NIKFSISPNSYLKKIDIFGNSDITKVYYEAISWLQIALKFIEFSKTNHCLSYDIQKHFL
FT                   PVVCNKGLSVKTINKDPLHLKKYLEYLELYIENQPLGAVYRVKQYLSYRVIKKILSVKG
FT                   MKKIFLPFDIIFVVLKYQINKKYKKSMKNQKLPLEFYKDYQKAIRLKMKIFKIINIIFK
FT                   GKIWKI"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1481981..1483630)
FT                   /locus_tag="C1336_000310014"
FT                   /note="C1336_000310014 identified by Glimmer3 with a raw
FT                   score of 10.08."
FT   CDS             complement(1481981..1483630)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310014"
FT                   /product="putative sugar transferase"
FT                   /note="C1336_000310014 identified by Glimmer3 with a raw
FT                   score of 10.08. Gene function extrapolated from Cj1442c
FT                   (AL111168.1) after blastn alignment (94.97 percent identity
FT                   over a 298 bp alignment).; overlaps another CDS with the
FT                   same product name"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30472.1"
FT                   /translation="MALLSVIIPFGLSKERPYIEERIIEKAKSFQSDENIEFIFVEGYS
FT                   SKDHELKNFIQANHHIYLKDMDQKAFSQGRCRNLGASYAQSNVLLFLDVDCYISLDNFE
FT                   KILKLIQIKNIANNPNAILVLPVVYLTQKANEILKNYEIDFWDVLIQEDLISGKKKFVK
FT                   FFSPSSTSSLIINKHKFLELGGNNENFIGHGYEDFDLFARVLKSCIKFEKMPFNLNYDS
FT                   RNWNFCNFKGFRSWFSLLGYEACFYGIYMYHFWHIEPNQNGYMNRKHKNHKLFYKHLKN
FT                   LKDYHLKPLKIANVKNVKNLVLIRERYDFDSLSIYLGDFIYKNIDEIIAIKEEDFKNYL
FT                   NKEKISQILIDGNEYDSLKHFLKDYSCVYFKKGILPDSWLFFDENSDEIYKRKYWNFDL
FT                   SATQINETRAYFNSLSFEEKNGIIDFLKKNEIIDDDRYKFIFYLKNELYSFVEFDKFYQ
FT                   IIFNKQKLLTLNNYNKTFYSLQSFAYKPYLYEVKSMHIFSKILEFLGIYFIQSIISQTK
FT                   FYRLVRKLFFNPKDFFKDSRKINFKKSNNESN"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1483630..1484577)
FT                   /locus_tag="C1336_000310015"
FT                   /note="C1336_000310015 identified by Glimmer3 with a raw
FT                   score of 14.13."
FT   CDS             complement(1483630..1484577)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310015"
FT                   /product="arabinose-5-phosphate isomerase"
FT                   /note="C1336_000310015 identified by Glimmer3 with a raw
FT                   score of 14.13. Gene function extrapolated from CJE1617
FT                   (CP000025.1) after blastn alignment (96.27 percent identity
FT                   over a 885 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30473.1"
FT                   /translation="MNTLEIAKEVFEKEAQAILDLAKNLDENFNQAVNLMLNTKGRCIV
FT                   SGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEEIL
FT                   KIIPAIKKRKIPLIVMCGKKNSTLVKQGDIFLNIAVEKEACPLQLAPMSSTTATLVMGD
FT                   ALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVM
FT                   TSGKLGLCVVLENEKLVGIITDGDLRRALKTSDKPRFDFKAKEIMSTNPKVVDADAMAS
FT                   EAEEIMLKYKIKEIIVGKEEKVVGIIQLYAIGNV"
FT   gene            complement(1484587..1486245)
FT                   /locus_tag="C1336_000310016"
FT                   /note="C1336_000310016 identified by Glimmer3 with a raw
FT                   score of 10.66."
FT   CDS             complement(1484587..1486245)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310016"
FT                   /product="putative capsule polysaccharide export system
FT                   periplasmic protein"
FT                   /note="C1336_000310016 identified by Glimmer3 with a raw
FT                   score of 10.66. Gene function extrapolated from C8J_1351
FT                   (CP000814.1) after blastn alignment (96.84 percent identity
FT                   over a 1614 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30474.1"
FT                   /translation="MKKILILFFSCILCFGAVDVSQIISAEDQGSTTTSIDQNLSSNYD
FT                   IVNKENNLTKIHQILVFGAHLFNGNFKNYNQRVYNPDYKIAVGDQISLKIWGAVEFSQI
FT                   LVVDSQGNIFIPKVGAVNLLGVKNSALVSVIKARVNKIYKSNVFVYADMNAYQNVSVFV
FT                   TGSVNAPGLYQGLSSDSVIQYLDKAGGINLEYGSFRDIQILRNNSVIKNIDLYDFLLKG
FT                   QMDLFPFRSGDVILVGNVQNYAFVNGDVQRPFRFELSNDIKTLADLARVSGAKPIVTNA
FT                   IVKSYGEDHKLDVSAYNKMQFSKVLLRTGDEVEFHPEYVSENITISVNGEHNGLKTLVL
FT                   GKGTTLEDISKLIKANPQSNMQALQVFRKSVARTQKELINAQLKELETLALTSSSVTAQ
FT                   GAAIRAQQAKTILEFIQRAKQVQPKGQIVIDNPKSYNSVILEDGDTINVPSKNNLIIVQ
FT                   GEVSLPGAFVYDKGKDLRYYINLAGGYGERADTSKVLVIRSNGKAEKYHSGIDMKPGDS
FT                   VLVLPKVDSENLQIFSMLTQILYQIAIATNVVLNL"
FT   gene            complement(1486247..1487365)
FT                   /locus_tag="C1336_000310017"
FT                   /note="C1336_000310017 identified by Glimmer3 with a raw
FT                   score of 13.44."
FT   CDS             complement(1486247..1487365)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310017"
FT                   /product="putative capsule polysaccharide export transport
FT                   system permease protein"
FT                   /note="C1336_000310017 identified by Glimmer3 with a raw
FT                   score of 13.44. Gene function extrapolated from C8J_1352
FT                   (CP000814.1) after blastn alignment (96.78 percent identity
FT                   over a 621 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30475.1"
FT                   /translation="MEENKTLLEKIKDLSIFDSFKIVWFIMIFVVIYYTLIAAPRYVST
FT                   MILDVRSTSGESAQTSGILSLLSSASTASEDLNYLKGYIESSDMLKILDEKIKLKSLYQ
FT                   EQHIDLLFKIWDSSSKESYLKYYQNRVKLYVDETTKLLQVEVEGFTPKSAHLIAQTIMQ
FT                   ESEKFINEISHKAAREQMAFAENEVQKYKERYQKAQNDLIAFQNKYGVFDPLKQAETKA
FT                   SLVAQIEANLAQKEAKLLTLQSYMNDAAPEVVALKAEIEAIKKQLLREKSKISANNSSQ
FT                   KLNDLAAKFQDLTIEATFAQKAYEAALKAYESARIEALRKIKQLVIIQSPDIPESAKYP
FT                   ERIYDILTAFIVLSLIFGIIKFIKMIIEEHKY"
FT   gene            complement(1487365..1488027)
FT                   /locus_tag="C1336_000310018"
FT                   /note="C1336_000310018 identified by Glimmer3 with a raw
FT                   score of 12.99."
FT   CDS             complement(1487365..1488027)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310018"
FT                   /product="capsular polysaccharide ABC transporter,
FT                   ATP-binding protein"
FT                   /note="C1336_000310018 identified by Glimmer3 with a raw
FT                   score of 12.99. Gene function extrapolated from
FT                   CJJ81176_1440 (CP000538.1) after blastn alignment (95.32
FT                   percent identity over a 663 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30476.1"
FT                   /translation="MIKLINLTKSYPLFSGGRHYVFKNFTFEFPENCSIGLMGGNGAGK
FT                   STLMRLLSGAELPDNGKIITNKKLSWPLGLNGAFQGSLTARDNAKFVARVYGYKGKELQ
FT                   EKVKFVEDFAELGKFFDEPMKTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPAFRE
FT                   KSVKLYRERLSKSKVIMVSHDVAEIKEWCDKIIYMKNGQIAVYDDVDEGIAVYQGKA"
FT   gene            complement(1488024..1488806)
FT                   /locus_tag="C1336_000310019"
FT                   /note="C1336_000310019 identified by Glimmer3 with a raw
FT                   score of 8.13."
FT   CDS             complement(1488024..1488806)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310019"
FT                   /product="capsular polysaccharide ABC transporter, permease
FT                   protein"
FT                   /note="C1336_000310019 identified by Glimmer3 with a raw
FT                   score of 8.13. Gene function extrapolated from C8J_1354
FT                   (CP000814.1) after blastn alignment (93.81 percent identity
FT                   over a 97 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30477.1"
FT                   /translation="MFNVIHALFFRELKTRFGANRHLGYLWVVGEPMSITLAITVIVTI
FT                   IREYHHQVMPEGISIFMFLISGIMPYFMFRSIVTQLMNGTQANLALFAYKPVKPIHVFI
FT                   ARTLLEFCIYFVIFITVLFFAGWFFRFDVFPVHLLGVLFCIFLLMCSAFALGICFAIIW
FT                   HFVEPLRTLLAYFSIVFYWSSGIIFPTWLMPRPLLDIFYYNPLLHIMELLRFNFFENYP
FT                   LQDEYSYFYAIFWILLVLFIGLFIYYYNRQALTAAKKE"
FT   gene            complement(1488878..1489285)
FT                   /locus_tag="C1336_000310020"
FT                   /note="C1336_000310020 identified by Glimmer3 with a raw
FT                   score of 15.80."
FT   CDS             complement(1488878..1489285)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310020"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310020 identified by Glimmer3 with a raw
FT                   score of 15.80. Gene function extrapolated from
FT                   CJJ81176_1442 (CP000538.1) after blastn alignment (98.77
FT                   percent identity over a 408 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30478.1"
FT                   /translation="MDERILEFIKNEQLLSWAMIDEKGVYTASAFYAFDEKNLAFIIAS
FT                   HEDTKHIRLASENSSIALNIAKENKIAFLKGVQAKAEFKMASKEQMKIYFSKFPFAKLD
FT                   KSVKIYALEFFWLKFTNNALGLSKKLEFCKK"
FT   gene            1489360..1489911
FT                   /locus_tag="C1336_000310021"
FT                   /note="C1336_000310021 identified by Glimmer3 with a raw
FT                   score of 12.74."
FT   CDS             1489360..1489911
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310021"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310021 identified by Glimmer3 with a raw
FT                   score of 12.74. Gene function extrapolated from
FT                   CJJ81176_1443 (CP000538.1) after blastn alignment (97.77
FT                   percent identity over a 449 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30479.1"
FT                   /translation="MQIDASKNQSFSMDYTTKSGKHLALSMYDNQSISYANNEEGKTLN
FT                   LKRQYGFSFTFEGSKLTQNDLNEIKNAMKEVEPMIKDFLANSKVGELKPKEIIESAMQM
FT                   ANVLPTPNDENHQNAIMNNFTNKLSDLLKQNQTDDKDINTSMLEDSKKLLDEVLEQMKK
FT                   QQEKAKENQDKTDDSLNLYA"
FT   gene            1489948..1490637
FT                   /locus_tag="C1336_000310022"
FT                   /note="C1336_000310022 identified by Glimmer3 with a raw
FT                   score of 10.79."
FT   CDS             1489948..1490637
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310022"
FT                   /product="deoxyuridine triphosphatase domain protein"
FT                   /note="C1336_000310022 identified by Glimmer3 with a raw
FT                   score of 10.79. Gene function extrapolated from
FT                   JJD26997_1785 (CP000768.1) after blastn alignment (96.23
FT                   percent identity over a 690 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30480.1"
FT                   /translation="MTNIEILENMLKLQQKLNDETNGLNWENGYTKEGKLISWRRCIYM
FT                   ECAELIDSFAWKHWKNISSPTNWKNVRIEIVDIWHFILSLLLEEYRDKNGNDFKIIANE
FT                   VISVSVFQDFCKEEEHPNESDIYGILNDIELIIHKCSGFGFNLGELLSTYFTLAIKCGL
FT                   NLEILYKTYIGKNVLNIFRQNNGYKDGSYKKTWNGKEDNEVLAQILEQELDFDTIYKKL
FT                   EKCYKKA"
FT   gene            1490639..1491346
FT                   /locus_tag="C1336_000310023"
FT                   /note="C1336_000310023 identified by Glimmer3 with a raw
FT                   score of 7.25."
FT   CDS             1490639..1491346
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310023"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310023 identified by Glimmer3 with a raw
FT                   score of 7.25. Gene function extrapolated from C8J_1358
FT                   (CP000814.1) after blastn alignment (98.68 percent identity
FT                   over a 76 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30481.1"
FT                   /translation="MDILKLAIKDFLSLKFLKFALIPLIFSLVLMLFLGALGFSALLDY
FT                   FNSLFSVGEDSFWAWFYALHFVQILITIISFLFSGFIVVFASVFLALFITSFLTPFIAK
FT                   EINQKYYHYDNTNEVSTLKTIFEFFKIFIKFIGILLLCTLTLFLPFINIFVYYLAFYYL
FT                   FHKLLMIDVTSTILDKESFKNFHSNFSPLEFKFSTLCFYLLSSVPLLGLFFASVFCDFS
FT                   HTFSLSKNFKTKS"
FT   gene            complement(1491336..1492301)
FT                   /locus_tag="C1336_000310024"
FT                   /note="C1336_000310024 identified by Glimmer3 with a raw
FT                   score of 13.02."
FT   CDS             complement(1491336..1492301)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310024"
FT                   /product="PP-loop family protein"
FT                   /note="C1336_000310024 identified by Glimmer3 with a raw
FT                   score of 13.02. Gene function extrapolated from CJE1626
FT                   (CP000025.1) after blastn alignment (97.93 percent identity
FT                   over a 482 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30482.1"
FT                   /translation="MQIKDEILALLKRGKNLLAFSYGSDSSALFYLLMQEKIDFDLVMI
FT                   NYKTRKNSDLEELKAKELALKFHKKIFIKHAPKFQSNFEKKARDFRYDFFEKICLEQDY
FT                   DHLILAHHLNDQFEWFLMQLSRGAGLAEILGMQECEKRSNYTLLRPLLFISKDEISSFL
FT                   KEKDIFYFYDESNENEKYFRNYIRKNFSNAFVSKFHQGLKRSFSYLNEDRKKLYDFENI
FT                   KEIQGLLICPKNESLIARAVKMKGLLLSTAQRKELLKGDCVLGGKIALVYKNEQAIVFE
FT                   YETCQKLPKNFKEECRIAKIPRLLRAYLYNHKIDISSLSF"
FT   gene            complement(1492291..1493610)
FT                   /locus_tag="C1336_000310025"
FT                   /note="C1336_000310025 identified by Glimmer3 with a raw
FT                   score of 8.52."
FT   CDS             complement(1492291..1493610)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310025"
FT                   /product="MiaB-like tRNA modifying enzyme YliG"
FT                   /note="C1336_000310025 identified by Glimmer3 with a raw
FT                   score of 8.52. Gene function extrapolated from CJE1627
FT                   (CP000025.1) after blastn alignment (99.06 percent identity
FT                   over a 213 bp alignment).; MiaB-like tRNA modifying enzyme
FT                   YliG, TIGR01125"
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30483.1"
FT                   /translation="MSKLYLMSLGCNKNLVDSEIMLGRLSTYELCDEPSKADVLIVNTC
FT                   GFIDSAKKESINAILDLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDYER
FT                   IDEMILKKTNLFSNSTYLQSENSKRIITGSNFHAFIKIAEGCNQKCSFCAIPSFKGKLK
FT                   SREINSIIAELKDLVARGYKDFSFIAQDTSSYLFDKSEKDGLIRLIDEVEKIKGIRAAR
FT                   ILYLYPTSASEALIKRIIASEIFVNYFDMPLQHISDNMLKIMKRGANSTRLKEMLNLMK
FT                   SAPNSFLRTGFIVGHPGESEADFEELCEFVKDFGFDRVSVFAYSKEEDTAAFDMEQVSF
FT                   KVINKRLKIIEKIVDEVIEKSFEKEVGQKRLVVCTGESSEGEFFIAAKDLRWDREIDGE
FT                   ILINESECGNLEMGQIYECEILQNLDKKLLAKALRKVDAN"
FT   gene            1493684..1494781
FT                   /locus_tag="C1336_000310026"
FT                   /note="C1336_000310026 identified by Glimmer3 with a raw
FT                   score of 12.17."
FT   CDS             1493684..1494781
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310026"
FT                   /product="peptide chain release factor 2"
FT                   /note="C1336_000310026 identified by Glimmer3 with a raw
FT                   score of 12.17. Gene function extrapolated from
FT                   CJJ81176_1448 (CP000538.1) after blastn alignment (97.90
FT                   percent identity over a 1097 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30484.1"
FT                   /translation="MDNYEFSELLKTLKNKVGNIASIIKPENIKTRLKEIEELENSPSF
FT                   WSDVKQAGIIGKEKTKITNLLKNYENAFNALNDASELFDLANSENDTETLEALFNDAPK
FT                   LEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGFKVE
FT                   TLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSSVMVS
FT                   PELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHK
FT                   NKATAFKMLKSRLYELELMKQQDSANTGEKSEIGWGHQIRSYVLFPYQQVKDNRSGEAF
FT                   SQVDNILDGDIKKMIEGVLIALKAE"
FT   gene            complement(1494939..1495118)
FT                   /locus_tag="C1336_000310027"
FT                   /note="C1336_000310027 identified by Glimmer3 with a raw
FT                   score of 2.69."
FT   CDS             complement(1494939..1495118)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310027"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310027 identified by Glimmer3 with a raw
FT                   score of 2.69. Gene function extrapolated from
FT                   CJJ81176_1449 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 180 bp alignment) - for clarity,
FT                   the original product name 'conserved domain protein' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30485.1"
FT                   /translation="MKKYPNHKLYDYTSVRTISDINNPEGKIKEMKRDLEIDKTPYSNY
FT                   VFLLNPNDKKTIKL"
FT   gene            complement(1495375..1496493)
FT                   /locus_tag="C1336_000310028"
FT                   /note="C1336_000310028 identified by Glimmer3 with a raw
FT                   score of 14.82."
FT   CDS             complement(1495375..1496493)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310028"
FT                   /product="tRNA pseudouridine synthase D"
FT                   /note="C1336_000310028 identified by Glimmer3 with a raw
FT                   score of 14.82. Gene function extrapolated from Cj1457c
FT                   (AL111168.1) after blastn alignment (98.28 percent identity
FT                   over a 291 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30486.1"
FT                   /translation="MNLAEENIIFKPLYSLKHSPINAYFSKNSDDFVVRERPLYEFSGK
FT                   GEHLILHINKKDLTANEALKILSEASGVKIRDFGYAGLKDKQGSTFQYLSMPKKFESFL
FT                   SNFSHPKLKILEIFTHENKLRIGHLKGNSFFIRLKKVLPSDALKLEQALMNLDKQGFAN
FT                   YFGYQRFGKFGDNYKEGLEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELSHFAN
FT                   DFSEKELIQIYKISKEEAKELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAELERFRA
FT                   RDISAMGLLIGAKAYETGEGLALNLENEIFKDALEFKAKMQGSRRFMWGYLEELKWRYD
FT                   EEKAHFCIEFFLQKGSYATVVLEEILHKNLFE"
FT   gene            complement(1496462..1497283)
FT                   /locus_tag="C1336_000310029"
FT                   /note="C1336_000310029 identified by Glimmer3 with a raw
FT                   score of 8.95."
FT   CDS             complement(1496462..1497283)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310029"
FT                   /product="thiamine-monophosphate kinase, putative"
FT                   /note="C1336_000310029 identified by Glimmer3 with a raw
FT                   score of 8.95. Gene function extrapolated from CJE1632
FT                   (CP000025.1) after blastn alignment (96.84 percent identity
FT                   over a 822 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30487.1"
FT                   /translation="MNKEDFIIKAFLNEKNGDDGAIIDDWCFSKDLFFENVHFKREWFS
FT                   LEQIATKAMLVNISDAIAMNAVPKYALLGLALPKKLSENEIKALQKGFLKTARKFNIKI
FT                   IGGDTISNDKIDISLTIISKINDKAVFRKGLKKGHLLAYTGKLGRSLKGLEILQNGGTL
FT                   KPNHVFIKPKLRASFFYEIAPLISCAMDISDGLSKDLSRLLSLNKCGISWFKKLDDYTL
FT                   YSGEEYEILFAFDEKERQNIETIAKKYGVKLNIFGKAVKGKYEFSGREHHF"
FT   gene            1497370..1498443
FT                   /locus_tag="C1336_000310030"
FT                   /note="C1336_000310030 identified by Glimmer3 with a raw
FT                   score of 13.92."
FT   CDS             1497370..1498443
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310030"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310030 identified by Glimmer3 with a raw
FT                   score of 13.92. Gene function extrapolated from Cj1459
FT                   (AL111168.1) after blastn alignment (98.33 percent identity
FT                   over a 540 bp alignment). Similar to Cj1459."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30488.1"
FT                   /translation="MKKLELRIFRFDKTKDYEAYYKPYIYDNYENFASFYDLLLQVQDD
FT                   DIYFDFDKDEDTYIVVNKQIIPLFTPLEKIAKEFDFNLCIEPLSTKRAIKDLIIDKNDF
FT                   LDKYKYLEKFGDEEDKKLYAKYDYLYYASEILDYLPEYMGDGVFYLASKMIEKYPEKKI
FT                   EILKTLADKEKGIFYHLESKNEILETTIKNLQNEILNLGLFDKNILHFDLPKTNAFDNE
FT                   IKELKEIKHNFKDFNIAFYGFNACDTLKSKLEAKFISYENSTKNNGFTLLNLNPTLSYK
FT                   MAADIVLDAYDSGADFMVVKEEKDFYLFDTCAKKLMQTSKRDFEDFYILSRFEFLALIQ
FT                   GIQAPSLKNHTLKVNLI"
FT   gene            1498440..1498823
FT                   /locus_tag="C1336_000310031"
FT                   /note="C1336_000310031 identified by Glimmer3 with a raw
FT                   score of 13.87."
FT   CDS             1498440..1498823
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310031"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310031 identified by Glimmer3 with a raw
FT                   score of 13.87. Gene function extrapolated from
FT                   JJD26997_1795 (CP000768.1) after blastn alignment (96.88
FT                   percent identity over a 256 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30489.1"
FT                   /translation="MKISLECKDLIIEKTLELFLKDHLVMKKDCDFIISDEKIHTAKPL
FT                   FIISKNSPFLSVPFSKEALFESLNEFDNALKAAALQLALEQKRLLEEKIEAIALEFKKD
FT                   YENKIDLAIKNLKNKLVKALNDE"
FT   gene            1498816..1499502
FT                   /locus_tag="C1336_000310032"
FT                   /note="C1336_000310032 identified by Glimmer3 with a raw
FT                   score of 12.07."
FT   CDS             1498816..1499502
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310032"
FT                   /product="putative site-specific DNA methyltransferase"
FT                   /note="C1336_000310032 identified by Glimmer3 with a raw
FT                   score of 12.07. Gene function extrapolated from
FT                   JJD26997_1796 (CP000768.1) after blastn alignment (95.31
FT                   percent identity over a 341 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30490.1"
FT                   /translation="MNDEFISVKDFFNHNEKRKKFLQKQEITSPKEKIKKIKETKLYTN
FT                   IESGKYKGKKLLLPSLTTTRSTKSIVKSCVFNVIREDLRDKIFIEAFGGSALMAAEALS
FT                   NYALKAYAIELDVKAYKIALENAKNIDPNLEAIHANTFEILPQLIENSKNEIILYLDPP
FT                   FDIREGFSDIYEKIYHFLENLDLKTLNLIIFEHHSTIKTPEKIQNFQKVKEKKFGSTSL
FT                   SFYSSN"
FT   gene            complement(1499531..1501201)
FT                   /locus_tag="C1336_000310033"
FT                   /note="C1336_000310033 identified by Glimmer3 with a raw
FT                   score of 9.60."
FT   CDS             complement(1499531..1501201)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310033"
FT                   /product="galactosyltransferase"
FT                   /note="C1336_000310033 identified by Glimmer3 with a raw
FT                   score of 9.60. Gene function extrapolated from
FT                   CJJ81176_1432 (CP000538.1) after blastn alignment (95.12
FT                   percent identity over a 123 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30491.1"
FT                   /translation="MKVVVCGHSDFVISFSSMQQSFKKYNIELKNLSLPATNSSFYIFL
FT                   SLLKENYNELKESDLIIILFNTSDDSYISNKERIVQEIYFTFNQLSLLQNKVLVLLKHN
FT                   LNQRFNFFVERIYRKLCVDFGFSLIDFNENNHLRTDILKLTYDNTHYFNFVLGQLAEKI
FT                   AINFHNFPLPKKNINNKINFKICFASEMINSQNCELIKFKCHLFDELKIYKITKENFLR
FT                   FPEEYENYYIIDVISNNQNAVLMSSLCFKTEKTIKTTLLRPGLACKGLNEPIKITNKLK
FT                   VLYDYLDERINEDKWYPYDMVKSDKKLGYCGVIAFLLIDNNEISIDIEEYENQTILIPR
FT                   EYNFNHLAPPVELYKEVINEYCSKMDPRKLAPLQNQIKEKDNIISTLNQEKTMLQNELN
FT                   SFPIKKQNLEIKNLEQDLKNKELQSFVLKKELGNKFVKNININYIDKNSAKFRIHNHLS
FT                   YKLGQALIENSKSILGYIRIPFVLSYIKDKHKFEQKAYEEKIKDNPNLALPPLETYPDY
FT                   KEALKEKECFTYKLGEAFIKASKNWYGGGVYQIYPQRCA"
FT   gene            complement(1501198..1501320)
FT                   /locus_tag="C1336_000310034"
FT                   /note="C1336_000310034 identified by Glimmer3 with a raw
FT                   score of 9.52."
FT   CDS             complement(1501198..1501320)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000310034"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000310034 identified by Glimmer3 with a raw
FT                   score of 9.52. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30492.1"
FT                   /translation="MNLVAEIEKFYQITLDFDDITPENFINFKSIKAMLELKKI"
FT   gap             1501384..1501986
FT                   /estimated_length=603
FT   gene            complement(1503052..1503180)
FT                   /locus_tag="C1336_000320000"
FT                   /note="C1336_000320000 identified by Glimmer3 with a raw
FT                   score of 2.15."
FT   CDS             complement(1503052..1503180)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320000"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320000 identified by Glimmer3 with a raw
FT                   score of 2.15. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30360.1"
FT                   /translation="MLVIKSKNIVKTLMDSSFNLLLMIDQARSVPSELRSVKFNVC"
FT   gene            1503140..1504186
FT                   /locus_tag="C1336_000320001"
FT                   /note="C1336_000320001 identified by Glimmer3 with a raw
FT                   score of 14.43."
FT   CDS             1503140..1504186
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320001"
FT                   /product="flagellar P-ring protein FlgI"
FT                   /note="C1336_000320001 identified by Glimmer3 with a raw
FT                   score of 14.43. Gene function extrapolated from
FT                   CJJ81176_1455 (CP000538.1) after blastn alignment (98.66
FT                   percent identity over a 1047 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30361.1"
FT                   /translation="MRVLTIFLLFMTSIFAVQIKDVANTVGVRDNQLIGYGLVVGLNGS
FT                   GDGTSSKFTLQSISNLLQGMNIKVDPNDIKSKNTAAVMVTAKLPAFAKSGDKLDITVSS
FT                   MGDAKSLQGGTLLLTALRGIDGEIYAIAQGSISTGGLTPRPGGAGSHSTAATVMGGANV
FT                   EREIPQNFSQNNDLTLSLKVADFKTANDIERVLNTVFGEEVAKAIDSRTVKLKKPEDLS
FT                   NVDFMARVLEQDIAYKPQSKVIIDERTGTVIAGVDVEVEPVLITHKDITIKIDPNNNAV
FT                   ANQNEIDMKDGGFVDPSSNTLRINNAKSTVANIARMLNKLGATPNDIIAIMENLKRAGA
FT                   INADLEII"
FT   gene            1504186..1504527
FT                   /locus_tag="C1336_000320002"
FT                   /note="C1336_000320002 identified by Glimmer3 with a raw
FT                   score of 14.02."
FT   CDS             1504186..1504527
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320002"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320002 identified by Glimmer3 with a raw
FT                   score of 14.02. Gene function extrapolated from C8J_1369
FT                   (CP000814.1) after blastn alignment (97.73 percent identity
FT                   over a 309 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30362.1"
FT                   /translation="MKIDNFLNTYSMNSALLDRAAKARSLESSIKINDNDIVTKSKEDE
FT                   ALKEQTDAFEAFFLKQVLDVSLKSQNSLFGKDASDEIYSSMYNDTMSKALSGGMGFSKL
FT                   LYDFLKERG"
FT   gene            1504590..1504787
FT                   /locus_tag="C1336_000320003"
FT                   /note="C1336_000320003 identified by Glimmer3 with a raw
FT                   score of 10.31."
FT   CDS             1504590..1504787
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320003"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320003 identified by Glimmer3 with a raw
FT                   score of 10.31. Gene function extrapolated from Cj1464
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 80 bp alignment). Similar to Cj1464."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30363.1"
FT                   /translation="MINPIQQSYVANTTLNTNRIDKETKTNDTQKTENDKASKIAEQIK
FT                   NGTYKIDTKATAAAIADSLI"
FT   gene            1504827..1505261
FT                   /locus_tag="C1336_000320004"
FT                   /note="C1336_000320004 identified by Glimmer3 with a raw
FT                   score of 13.75."
FT   CDS             1504827..1505261
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320004"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320004 identified by Glimmer3 with a raw
FT                   score of 13.75. Gene function extrapolated from
FT                   CJJ81176_1458 (CP000538.1) after blastn alignment (99.31
FT                   percent identity over a 435 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30364.1"
FT                   /translation="MLKQRLDEVNAILAKLIALTEEDIENIKVAKHESVTPSVEEKNKL
FT                   IAEFITAKKQLDVALVELNNSSTKGLSELLDDEDKQKLDLLKKNLQNLHSKNKEYAKFV
FT                   LIVKDFLDSLVNKMFDINDGTNNAYGDKKTNPESIFKINV"
FT   gene            1505271..1507097
FT                   /locus_tag="C1336_000320005"
FT                   /note="C1336_000320005 identified by Glimmer3 with a raw
FT                   score of 11.96."
FT   CDS             1505271..1507097
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320005"
FT                   /product="putative flagellar hook-associated protein FlgK"
FT                   /note="C1336_000320005 identified by Glimmer3 with a raw
FT                   score of 11.96. Gene function extrapolated from
FT                   JJD26997_1814 (CP000768.1) after blastn alignment (97.43
FT                   percent identity over a 1827 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30365.1"
FT                   /translation="MGIFGTLYTGVTGLKASEVQIATTGNNISNANATFYTRQRVVQTT
FT                   NGYITTGGVQVGTGTAIESIVRLHDEYSYYKLKGASNQLEYTKYMASTLQEIAQRFPDL
FT                   QNTGILKDLENYNKAWNDFASNPNENATKIALVKASQTLTESINNTFATLDKIQKKVND
FT                   DIKNTVDEINRIGEEIATINKQIYGQEALPTEHANELRDRRDELELTLSKLVSAVASKN
FT                   EINQDNRLDTTITDPGHQYNLSIEGFSIVDGINFHPLKLDYDDKNKSYSIYYETPDEKV
FT                   RDLTAKISGGQLGAQLDLRGRNYSKSEGKYKDGIIQGYMDSLDTFAKTMINETNNLYAS
FT                   SAKSSVTSDYLSGLKGDIPLVNYDRTIQPGSFDIVIYDDKGDKKLTKTITIDVNTTMND
FT                   IMRQINANTDDNNDHNANNDVDDHINASFSYDAKTGDGLFQINAKSGFKVAIEDKGTNF
FT                   AGAFSIGGFFSGTDASDMKVKDSILNDPSTVRASSNGVDSGNDMANKIIQLQYEKVNFY
FT                   NEDGTIDNLTMEEYYRKLTGKIASDGENNNVVNSSNETLYNSVYSEYQSKSGVNTNEEL
FT                   AALIQYQSSYGAAAKIVSTVDQMLDTLLGLKS"
FT   gene            1507114..1507878
FT                   /locus_tag="C1336_000320006"
FT                   /note="C1336_000320006 identified by Glimmer3 with a raw
FT                   score of 11.12."
FT   CDS             1507114..1507878
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320006"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320006 identified by Glimmer3 with a raw
FT                   score of 11.12. Gene function extrapolated from Cj1467
FT                   (AL111168.1) after blastn alignment (98.44 percent identity
FT                   over a 513 bp alignment). Similar to Cj1467."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30366.1"
FT                   /translation="MKNFIHLKAKLDFLANQKNTNHSLFETPDPLQIAKIHNDEFTALI
FT                   CALFAYGNAKNILNFLKKLDFSLLNLQEKQIKKELKNLKYRFQNEKDIQEIFITLSRLK
FT                   NEISLYELFYQAYQKRENTTDAILAFMQKIKTLNSYSSYGYDFFFGKIWQNTPTSPLKR
FT                   YNMYLRWMVRKDELDLGLFAKIHTKDLLIPLDTHTHKISLTLGLLKRKIYDYKSVLELT
FT                   QNLKKLDANDPIKYDFALYRLGQSKEIDKFKE"
FT   gene            1507882..1508646
FT                   /locus_tag="C1336_000320007"
FT                   /note="C1336_000320007 identified by Glimmer3 with a raw
FT                   score of 11.67."
FT   CDS             1507882..1508646
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320007"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320007 identified by Glimmer3 with a raw
FT                   score of 11.67. Gene function extrapolated from
FT                   CJJ81176_1462 (CP000538.1) after blastn alignment (99.35
FT                   percent identity over a 765 bp alignment) - for clarity,
FT                   the original product name 'membrane protein, putative' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30367.1"
FT                   /translation="MGFEHLDTIYYFILFFVALFAGFIDSIVGGGGLITLPALIACGIP
FT                   AHLSLATNKLQSVFGSFTATLTYFKSTTLPHLAWGVFFTALGAAIGSYSVLFVKDEQLK
FT                   LIILIFLTLTFLYTALRPNLGKHESEPKIKNIKIFHLICGLTLGFYDGFLGPGTGSFWI
FT                   FACVMLLGFNMRKASINTKILNFTSNIIALAIFLWQYELLWAIGLLMGVGQVLGAYLGS
FT                   KLVLKTNGKFIKTLFLIVVGATIIKVAWDYFS"
FT   gene            complement(1508639..1509820)
FT                   /locus_tag="C1336_000320008"
FT                   /note="C1336_000320008 identified by Glimmer3 with a raw
FT                   score of 11.27."
FT   CDS             complement(1508639..1509820)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320008"
FT                   /product="general secretory pathway protein F"
FT                   /note="C1336_000320008 identified by Glimmer3 with a raw
FT                   score of 11.27. Gene function extrapolated from C8J_1375
FT                   (CP000814.1) after blastn alignment (98.18 percent identity
FT                   over a 165 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30368.1"
FT                   /translation="MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIINIKEIQ
FT                   KSNFQRLKDENFILFFKELALLCEVGLSVQEAIRELYLMHSCKIMKKILDNLILAQNLN
FT                   QAFENANFGLNRAELALIKTAEKTGKISEVFNQISKLREKSLETQKQLKKAFRYPTLVF
FT                   LSIIGAFLFLMLFVVPNFKDLFENLGASLPFVTHVMLEIYNFLDGYGIFCILLFVIFIV
FT                   MLILAYKHFHSFAFSCDFLFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLA
FT                   IIGLENKFLIFQYKKLFSFIDSGLELSQVFKKIDIFDSLVFSMLSVAMKSGRLEVLSEE
FT                   IAKYYQQKSENLMDRFLVFLEPMMTLFVALLVLFLALGIFLPMWELSSGVNFN"
FT   gene            complement(1509817..1511376)
FT                   /locus_tag="C1336_000320009"
FT                   /note="C1336_000320009 identified by Glimmer3 with a raw
FT                   score of 9.47."
FT   CDS             complement(1509817..1511376)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320009"
FT                   /product="general secretory pathway protein E"
FT                   /note="C1336_000320009 identified by Glimmer3 with a raw
FT                   score of 9.47. Gene function extrapolated from
FT                   CJJ81176_1464 (CP000538.1) after blastn alignment (99.62
FT                   percent identity over a 264 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30369.1"
FT                   /translation="MESRMDKIFQAYIDNEISLDEICTKFNITSWDFFKKLANFCNLHF
FT                   VDLDEDNDFIYEGIPFSLLLKFKFLLIKNNDGFMIIRSKPCSLELLEQVKTFMICEKIV
FT                   TAIADELKIAKILNQIRIQEEIKRLSIKLRLEWQENQKRDDQSCISQIFDFLLHEILSF
FT                   HASDIHIEARNDDALIRFRVDGILREFAIFEKDVYEALVFHVKFLACLNLAESRKTQDG
FT                   SFELDFENERYDFRVSCLPLIYGESVVIRILKHDKEILDLYKLNLGDKNLEILKKILHR
FT                   PNGMILLTGPTGSGKSTTLYACLNELKSIEKKIISAEDPIEYKIPLVQQILLNSKVGVE
FT                   FNSILRAILRQDPDIIMIGEIRDEESLDIALKASLTGHLLLSTLHTNDALSTIDRLLDM
FT                   QAKSYLIASALSLVIAQRLVRKLCPWCKQKSKKHYIEFEGEFFEPKGCERCHHSGFFGR
FT                   ELIAECLEINEDLACAIRENQDKTILMELAKKYGFQTMFEQGLKKAKEGLTSIDELLRV
FT                   VR"
FT   gene            complement(1511366..1511953)
FT                   /locus_tag="C1336_000320010"
FT                   /note="C1336_000320010 identified by Glimmer3 with a raw
FT                   score of 13.49."
FT   CDS             complement(1511366..1511953)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320010"
FT                   /product="transformation system protein"
FT                   /note="C1336_000320010 identified by Glimmer3 with a raw
FT                   score of 13.49. Gene function extrapolated from C8J_1377
FT                   (CP000814.1) after blastn alignment (98.52 percent identity
FT                   over a 473 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30370.1"
FT                   /translation="MQERIKELELRYKYFLLKKYLKYLFLIVLILVIAFCFFMLMQKYN
FT                   NQKNIYLQAIEHKKHLEQKILQAQILQEKNKISREKLYKELEEVKAVRENTHISKIEID
FT                   SKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSWLIF
FT                   AQAKRALGEEKEAQSVLDAYINYYGLMELDGK"
FT   gene            complement(1511957..1512565)
FT                   /locus_tag="C1336_000320011"
FT                   /note="C1336_000320011 identified by Glimmer3 with a raw
FT                   score of 11.07."
FT   CDS             complement(1511957..1512565)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320011"
FT                   /product="putative ATP/GTP-binding protein"
FT                   /note="C1336_000320011 identified by Glimmer3 with a raw
FT                   score of 11.07. Gene function extrapolated from C8J_1378
FT                   (CP000814.1) after blastn alignment (99.81 percent identity
FT                   over a 526 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30371.1"
FT                   /translation="MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAK
FT                   KYNVDFINENFKDQSFLKEKIEFLISQGQSLIILDEVGMYDYAMLESIRIYSDSISFVL
FT                   SSHKKLNILKKEHFKSRLSACFELKNISLLELDDYIKLKFGMNFSNKCLKFLQKISQGN
FT                   LRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR"
FT   gene            complement(1512558..1513970)
FT                   /locus_tag="C1336_000320012"
FT                   /note="C1336_000320012 identified by Glimmer3 with a raw
FT                   score of 10.62."
FT   CDS             complement(1512558..1513970)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320012"
FT                   /product="putative type II protein secretion system D
FT                   protein"
FT                   /note="C1336_000320012 identified by Glimmer3 with a raw
FT                   score of 10.62. Gene function extrapolated from Cj1474c
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 82 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30372.1"
FT                   /translation="MIRLILINILFCHYLYALDCQKRLFDISINEKLSIQESLDELAKY
FT                   CSFSIIVKDKIAKEKLETLQNSVNIHQMSLDEIFNFFIKEHDLSYDFDGKILRISGINT
FT                   KIFKISYITSIREGQSITKASVDAKPRQSEYSGSFDDAEDNMIKSMEKFDFWQNIEKEI
FT                   IVLLKNSHEDYEAKTPIINPNAGLIIVTGTNSQLKSVKNYLQKLENRLKKQVIIDVSIL
FT                   AVSLNESHSSGINWQNFNIGLNSQVNNENSFIQFQNGQGFVKNLGLRANLNFDSIINFL
FT                   SQNGKTSVLSNPKLMALNNQQAIISVGDTINYQVKESSKGTENGTTVSESYNNYSIFVG
FT                   ILLNILPEISDDGKIMLRINPSLSDFKYPEDNKRQKEPRTIAPDTIQKKLSSVVQVENN
FT                   QTLILGGLISHDKSNEKNSINFLSKIPILGSLFKGEVLNSKATEIVFIITPSIVDSVNA
FT                   PSLKDLGFKHYE"
FT   gene            complement(1513948..1514259)
FT                   /locus_tag="C1336_000320013"
FT                   /note="C1336_000320013 identified by Glimmer3 with a raw
FT                   score of 7.45."
FT   CDS             complement(1513948..1514259)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320013"
FT                   /product="transformation system protein"
FT                   /note="C1336_000320013 identified by Glimmer3 with a raw
FT                   score of 7.45. Gene function extrapolated from
FT                   CJJ81176_1468 (CP000538.1) after blastn alignment (99.68
FT                   percent identity over a 312 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30373.1"
FT                   /translation="MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRHI
FT                   KITAIMLDKVKIYDRWYKKGDMIDDAIIHEINTKEIKFQYDNLEIAIQINKNDKININ"
FT   gene            complement(1514283..1517843)
FT                   /locus_tag="C1336_000320014"
FT                   /note="C1336_000320014 identified by Glimmer3 with a raw
FT                   score of 14.27."
FT   CDS             complement(1514283..1517843)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320014"
FT                   /product="pyruvate ferredoxin/flavodoxin oxidoreductase"
FT                   /note="C1336_000320014 identified by Glimmer3 with a raw
FT                   score of 14.27. Gene function extrapolated from CJE1649
FT                   (CP000025.1) after blastn alignment (98.74 percent identity
FT                   over a 3561 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30374.1"
FT                   /translation="MGKIMKTMDGNEAAAYAAYAFTEVAGIYPITPSSPMADYTDMWAA
FT                   AGKKNLFGVPVKIVEMQSEAGAAGSVHGSLQAGALTTTYTASQGLLLKIPNMYKIAGQL
FT                   LPCVIHVAARSLAAQALSIFGDHQDIYAARQIGFAMLCSHSVQETMDLAGIAHLAAIKG
FT                   RVPFLHFFDGFRTSHEIQKVEVMDYAHFDRLLDREALLEFRNNALNPENPKTRGTAQND
FT                   DIYFQTREVSNRFYDALPDVVNEYMQEISKITGREYKPFTYYGHKEPERVIVAMGSVTQ
FT                   ALEEVVDYLNAKGEKVGILKVYLYRPFSLKYFFDVMPKSVKKIAVLDRTKEPGSLGEPL
FT                   YLDVKSAFYGRENAPVIVGGRYGLSSKDVDPAQMIAVFENLKLDNPKDGFTVGIVDDVT
FT                   HTSLSTGEKISLGDESTIECLFYGLGADGTVGANKNSIKIIGDKTDFYAQAYFAYDSKK
FT                   SGGYTRSHLRFSKKPIRSTYLVSTPHFIACSVAAYLEIYDVLAGIRKGGTFLLNSIWNA
FT                   EETIRQLPDAVKKTLAEKEVNFYIINATKLARDIGLGNRTNTIMQSAFFKLAKIIPYED
FT                   AQKYMKELAYKSYSKKGDAIVEMNYKAIDVGADGLVKVEVDPNWKNLELKEKEQTNAYK
FT                   GTEFVEKIVKPMNAAKGDDLPVSAFLGYEDGSFEHGTTEYEKRGVGVMVPRWIEANCIQ
FT                   CNQCASVCPHAVIRPFLINDEEMANAPRGVKDHALEAKGTKGEKLSFKIQVSPLDCTGC
FT                   ELCVHECPTKEKSLVMVPLQEEMDFGEQENADYLFKEITYKDDILNKETTKGAQFAQPL
FT                   FEFHGACPGCGETPYITLITRLFGERMIVANATGCSSIYGGSAPSTPYRKSVKNGHGPA
FT                   WGNSLFEDNAEFGLGMKIATENTRHRIEYIMNESMQEVPNALSALFKDWIANKDNGAMS
FT                   VEIKDKMIPILEQNKNIKAVQDILELKQYLSKKSHWIFGGDGWAYDIGYGGLDHVLASG
FT                   ENVNILVLDTEVYSNTGGQSSKSSRTGAVAQFAAAGKPIQKKDLGQIAMTYGYIFVAQV
FT                   NSTANYTHLIKAITAAEAYDGPSLVICYSPCIAHGIKGGLGYSGEQGELATKCGYWPLY
FT                   TFDPRLEEQGKNPLTLTGKEPDWDLYEQFLMNEVRYNSLKKANPEHAAELFERNKKDAQ
FT                   RRYRQLKRIAMADYSNEVES"
FT   gene            complement(1517936..1518577)
FT                   /locus_tag="C1336_000320015"
FT                   /note="C1336_000320015 identified by Glimmer3 with a raw
FT                   score of 13.51."
FT   CDS             complement(1517936..1518577)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320015"
FT                   /product="putative hydrolase"
FT                   /note="C1336_000320015 identified by Glimmer3 with a raw
FT                   score of 13.51. Gene function extrapolated from C8J_1382
FT                   (CP000814.1) after blastn alignment (98.29 percent identity
FT                   over a 642 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30375.1"
FT                   /translation="MNKTILFDLDGTLIDSTDAILNSFQGAFKALGLTSKNNEEIKNLI
FT                   GYPLEQMFRMLYPDKVNLSKEFVLAYREIYAQIYLEQTTLLPKVKEALELGSKIADLGI
FT                   VTTKGGKFTPILLDYLGVKKFFKTLITLEDVTNPKPSSEPIILALKRLNKTQENAYMIG
FT                   DTILDIQAAISANITPLALTCGYGNENELKAHSMVFLNAYEAVNYIARLN"
FT   gene            complement(1518577..1519536)
FT                   /locus_tag="C1336_000320016"
FT                   /note="C1336_000320016 identified by Glimmer3 with a raw
FT                   score of 14.44."
FT   CDS             complement(1518577..1519536)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320016"
FT                   /product="outer membrane fibronectin-binding protein"
FT                   /note="C1336_000320016 identified by Glimmer3 with a raw
FT                   score of 14.44. Gene function extrapolated from Cj1478c
FT                   (AL111168.1) after blastn alignment (99.26 percent identity
FT                   over a 950 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30376.1"
FT                   /translation="MKKIFLCLGLASVLFGADNNVKFEITPTLNYNYFEGNLDMDNRYA
FT                   PGIRLGYHFDDFWLDQLEFGLEHYSDVKYTNTNKTTDITRTYLSAIKGIDVGEKFYFYG
FT                   LAGGGYEDFSNAAYDNKSGGFGHYGAGVKFRLSDSLALKLETRDQINFNHANHNWVSTL
FT                   GISFGFGGKKEKAVEEVADTRPAPQAKCPVEPREGALLDENGCEKTISLEGHFGFDKTT
FT                   INPTFQEKIKEIAKVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGV
FT                   EKSRIKTVGYGQDNPRSSNDTKEGRADNRRVDAKFILR"
FT   gene            complement(1519661..1520050)
FT                   /locus_tag="C1336_000320017"
FT                   /note="C1336_000320017 identified by Glimmer3 with a raw
FT                   score of 15.29."
FT   CDS             complement(1519661..1520050)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320017"
FT                   /product="ribosomal protein S9"
FT                   /note="C1336_000320017 identified by Glimmer3 with a raw
FT                   score of 15.29. Gene function extrapolated from
FT                   CJJ81176_1472 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 390 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30377.1"
FT                   /translation="MATTYATGKRKTAIAKVWVKPGSGKISVNGVDLNTWLGGHEAIKL
FT                   KVVQPLLVTKQETSMDIKATTLGGGYSAQAEALRHGISRALAAMDADFRALLKPKGLLT
FT                   RDSRTVERKKYGRRKARRSPQFSKR"
FT   gene            complement(1520053..1520478)
FT                   /locus_tag="C1336_000320018"
FT                   /note="C1336_000320018 identified by Glimmer3 with a raw
FT                   score of 13.97."
FT   CDS             complement(1520053..1520478)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320018"
FT                   /product="50S ribosomal protein L13"
FT                   /note="C1336_000320018 identified by Glimmer3 with a raw
FT                   score of 13.97. Gene function extrapolated from C8J_1385
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 357 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30378.1"
FT                   /translation="MTKITKPNEVKREWIVLDAEGKRFGRLLTEVATILRGKNKPCFTP
FT                   NVDCGDYVIIINASKAVFTGANKAEDKLYHRHSGYFGSVKSEKFGDLLEKNPAKLYKLA
FT                   VRGMLPKTNLGRAMLKKLKIYAGSEHPHTAQIAKEGK"
FT   gene            complement(1520562..1523327)
FT                   /locus_tag="C1336_000320019"
FT                   /note="C1336_000320019 identified by Glimmer3 with a raw
FT                   score of 11.37."
FT   CDS             complement(1520562..1523327)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320019"
FT                   /product="ATP-dependent DNA helicase, UvrD/REP family"
FT                   /note="C1336_000320019 identified by Glimmer3 with a raw
FT                   score of 11.37. Gene function extrapolated from
FT                   CJJ81176_1474 (CP000538.1) after blastn alignment (100.00
FT                   percent identity over a 109 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30379.1"
FT                   /translation="MSQFEPFLALEASAGSGKTFALSVRFVALILKGVRINEILALTFT
FT                   KKAANEMQKRIIEAFLNLEKENKTSECNELCKLLGKDKEELISLRDAKKEEFLRTELKI
FT                   STFDAFFGKILRVFALNLGLSSDFTMSEERLDVREIFLKLLKKDELKDLAYYINLVDEK
FT                   ENFFNELEKFYENAYFQNLPKIPNPSKAYINKAYSELRSYCLGLTHVKNYKNLCDNFKS
FT                   EVLDLSVFMQSSFMTKFESTKYLQDLESTNLHFSAKRMELINALNTYAIELENYKIANL
FT                   MNLLNHYSEAKNIFHKDKNTLNFQDVSKKVYELITSEFKDMIYFRLDGFISHLLIDEFQ
FT                   DTSVIQYQILRPLIAELVSGEGVKKNRTFFYVGDKKQSIYRFRKGKKELFDLLKQEFSQ
FT                   IKSDSLNTNYRSKELLVDFVNETFKEKIKDYKEQFALESKKGGFVRIVESKEQKVKNQA
FT                   QEIKEKTLETLFEQINFLRSKNISYDDICILCWKNSDADMVLDFLREQKIPAFTQSNVL
FT                   LENKASVRLVLEYAKYCIFGDEFYLVFLKELLGFEPRKITLDFSKNAMENVLFLIKELK
FT                   LDLNDIALMQFIEYAKTKENFLKLLFEPCTLKIVSEQNMGISIMSVHKSKGLEFDHVIL
FT                   LDSLSKNNSNNEDIMLEYDINQGWQLHIKDKIRELTKEPIYTLFKENITRANYEDDINK
FT                   LYVAFTRAKESLIIIKRNEESVNGNYPSYFKGGFLNIHSQERGFLESKEQILSVKKESI
FT                   QALQKFEKISPQEVQSEEKLDSKELYFGNAFHFFMQNLKLPKGENFQILTQRCKSKFRH
FT                   FLDESDFEKLFKRIEILLKNIQFQNLIGDGKLLKEQALSFNGEIKQLDLLALKDEEAFI
FT                   IDYKTGLAMQDKHKEQVRTYKMAISEILKKDKVRAFIVYCLENEIQILEI"
FT   gene            complement(1523324..1525690)
FT                   /locus_tag="C1336_000320020"
FT                   /note="C1336_000320020 identified by Glimmer3 with a raw
FT                   score of 13.10."
FT   CDS             complement(1523324..1525690)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320020"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320020 identified by Glimmer3 with a raw
FT                   score of 13.10. Gene function extrapolated from
FT                   JJD26997_1829 (CP000768.1) after blastn alignment (99.11
FT                   percent identity over a 225 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30380.1"
FT                   /translation="MKLRIFSSSRQIREYYNHKKQQNALLDSAIHIGEFLDKVCLSNFH
FT                   KASSYESLLLMQEACLKSKDLEKKLGISVEFFAFLKNNEYLFSFFKELSLEKKSIEDLK
FT                   NNDYYATYNEHLEILDEVYKNYLVLLEKNSFYDDLSLPKNYTLNKDFLDEYEAIVYDLQ
FT                   GFLSKFEENLLSEISQIKEVVLSFKTSKFNLEYLLKLDFLKTFDLKINTHYEINLSKQE
FT                   ILKEEIFKTKNSKIKLKSFELRALQCAFVMDEISHFVRKGLKSENIVVITPDESFCEFL
FT                   RLFDKDNMLNFASGISIKESLFYQKFQALYESASSASFVYKNQEDYFEDTQMIFDYHNT
FT                   LLHSLKLDFIEFKKYFDEKCDFEYFEKLLALFLENEKQELIYLIRKELYFIKDLLKNQS
FT                   LTLKELIHLFFMQISQLSLSDVGGGKVTVMGLLESRGLCFDGVILVDFNEEFIPKRSVN
FT                   ELFLNNEVRKKAGLISYDRRENLQRFYYESLMKNALEVSICFVENEEKSKSRFLDELDF
FT                   DFFYETHIHQKAYLNALKLDYEGIKPNLTPIKAPILKHNPFEFPLSFSRFNLLENQKRT
FT                   YYYRYILNLAEPRVLSEESKAKNQGNFIHKMLEIYYKNYANNDFDIKAFANLLNKEYQK
FT                   YNISELDLEVFKLKFIQFAKNEKEHFSKGFYVAHTELELNNILKLGADSIKLKGTIDRI
FT                   DSSKEGNLIIDYKSGKVPSNSYQLAFYQALYDENASVGFYDLNSMQILHQKAKSLDELR
FT                   ERLKDLVLMSKEEIEFENEQDEHCPYKLIYKKELK"
FT   gene            complement(1525687..1526208)
FT                   /locus_tag="C1336_000320021"
FT                   /note="C1336_000320021 identified by Glimmer3 with a raw
FT                   score of 10.76."
FT   CDS             complement(1525687..1526208)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320021"
FT                   /product="putative lipoprotein"
FT                   /note="C1336_000320021 identified by Glimmer3 with a raw
FT                   score of 10.76. Gene function extrapolated from C8J_1388
FT                   (CP000814.1) after blastn alignment (99.26 percent identity
FT                   over a 271 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30381.1"
FT                   /translation="MLETKRSFWPYGILLSLLAIIIACIVTIFIASHHPVYEDDFYFDS
FT                   YQNVENNYNQIQKQQVNFDKFFKVNFQNDKITFIGKRKIPSYEVDQNSYVANFKISALQ
FT                   NINSDDLKVQVLLTRPFTKNFDQKLEGQVKNGILSIALPKLDKGRWELKLKFYANQETV
FT                   GFFSYELNAQ"
FT   gene            complement(1526195..1526797)
FT                   /locus_tag="C1336_000320022"
FT                   /note="C1336_000320022 identified by Glimmer3 with a raw
FT                   score of 9.56."
FT   CDS             complement(1526195..1526797)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320022"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320022 identified by Glimmer3 with a raw
FT                   score of 9.56. Gene function extrapolated from
FT                   JJD26997_1831 (CP000768.1) after blastn alignment (99.45
FT                   percent identity over a 550 bp alignment) - for clarity,
FT                   the original product name 'conserved hypothetical protein'
FT                   has been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30382.1"
FT                   /translation="MKKILQDGFFLAIFFFVLLPSRVFALDAVLFNENILSQKVSNEIN
FT                   LIGKELYQKSNIFIGVMVGDETEIETLLNKQKELPQSYILLLLSKNSHKVDIVGSKGAL
FT                   ALIDKEAVLSPYPGTGSILPILATNKGDIYNAAILNGYADIVDRVAKSLGLQLEHSIGN
FT                   ANRDTINILRILIYGFICFALLYYAQRRIKRKKNVRN"
FT   gene            complement(1526892..1527110)
FT                   /locus_tag="C1336_000320023"
FT                   /note="C1336_000320023 identified by Glimmer3 with a raw
FT                   score of 9.77."
FT   CDS             complement(1526892..1527110)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320023"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320023 identified by Glimmer3 with a raw
FT                   score of 9.77. Gene function extrapolated from
FT                   JJD26997_1832 (CP000768.1) after blastn alignment (99.54
FT                   percent identity over a 219 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30383.1"
FT                   /translation="MENNNRCVFSLSGVTGMLIATVLLLAILVVLTIWGLKAQQEVMQK
FT                   PYSLKDAQSVKMFGSKEQDHRSIKEAQ"
FT   gene            complement(1527110..1527973)
FT                   /locus_tag="C1336_000320024"
FT                   /note="C1336_000320024 identified by Glimmer3 with a raw
FT                   score of 13.06."
FT   CDS             complement(1527110..1527973)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320024"
FT                   /product="cb-type cytochrome c oxidase subunit III"
FT                   /note="C1336_000320024 identified by Glimmer3 with a raw
FT                   score of 13.06. Gene function extrapolated from C8J_1392
FT                   (CP000814.1) after blastn alignment (99.42 percent identity
FT                   over a 864 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30384.1"
FT                   /translation="MQWLNLEDNVNLLSLIGAILIILITLVIVSRMFKQMKEKKSESEL
FT                   SEHSWDGIGEYKNAVPTGWAVVFFLTIVWAIWYFLWGYPLNSFSSIGQYNEEVATHNTK
FT                   FEEKFKNLSPEDKIAMGQNIFLVQCSACHGITGDGINGKAQNLNIWGSEEGIINVIKHG
FT                   SKGMNFPGGEMLGAADLGVAEEDIPAIAAYVAKDLSAIKKTANENLVAKGKEAYATCAA
FT                   CHGEDGKGQDGMFPDLTKYGSAAFVVDVLHSGKAGFIGTMPSFPTLNNIQKEAVGEYVI
FT                   SLSRGE"
FT   gene            complement(1527973..1528236)
FT                   /locus_tag="C1336_000320025"
FT                   /note="C1336_000320025 identified by Glimmer3 with a raw
FT                   score of 6.00."
FT   CDS             complement(1527973..1528236)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320025"
FT                   /product="cb-type cytochrome c oxidase subunit IV"
FT                   /note="C1336_000320025 identified by Glimmer3 with a raw
FT                   score of 6.00. Gene function extrapolated from C8J_1393
FT                   (CP000814.1) after blastn alignment (99.62 percent identity
FT                   over a 264 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30385.1"
FT                   /translation="MEHLSIVFDVIKNLITFDLATVQKHEWEIFQGYGFFALVMFLSIV
FT                   LYAYWYHLYRTEKKGERNYENYANLALKDDIDDSVLESKRSA"
FT   gene            complement(1528241..1528906)
FT                   /locus_tag="C1336_000320026"
FT                   /note="C1336_000320026 identified by Glimmer3 with a raw
FT                   score of 14.41."
FT   CDS             complement(1528241..1528906)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320026"
FT                   /product="cytochrome c oxidase, cbb3-type, subunit II"
FT                   /note="C1336_000320026 identified by Glimmer3 with a raw
FT                   score of 14.41. Gene function extrapolated from
FT                   JJD26997_1835 (CP000768.1) after blastn alignment (99.55
FT                   percent identity over a 666 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30386.1"
FT                   /translation="MFSWLEKNPFFFAVAVFVVIAYAGIVEVLPNFAENARPIEGKKPY
FT                   TVLQLAGRAVYIKDSCNACHSQLIRPFKSETDRYGMYSVSGEFAYDRPFLWGSKRTGPD
FT                   LARVGNYRTADWHENHMWDPTSVVPDSIMPSYKHMFKNNADIETAYAEALTVKKVFNVP
FT                   YDTENGTKLGSWEDAQAEVKAEAQAIVDQMKNQEVKDAFAKGEIKEIVALIAYLNSLK"
FT   gene            complement(1528919..1530385)
FT                   /locus_tag="C1336_000320027"
FT                   /note="C1336_000320027 identified by Glimmer3 with a raw
FT                   score of 10.34."
FT   CDS             complement(1528919..1530385)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320027"
FT                   /product="cytochrome c oxidase, cbb3-type, subunit I"
FT                   /note="C1336_000320027 identified by Glimmer3 with a raw
FT                   score of 10.34. Gene function extrapolated from
FT                   CJJ81176_1482 (CP000538.1) after blastn alignment (99.35
FT                   percent identity over a 920 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30387.1"
FT                   /translation="MHPGNVLNYDYTVARYFMFTTVLFGIVGMAIGTLIAFQMAYPNLN
FT                   YLAGEYATFSRLRPLHTSGVIFGFMLSGIWATWYYIGQRVLKVSMAESRFLMAVGKLHF
FT                   WLYMLTMVLAVISLFMGVTTSKEYAELEWPLDILVVLVWVLWGVSIFGLIGIRREKTLY
FT                   ISLWYYIATFLGIAMLYLFNNMEVPTYFVTGMGKWWHSVSMYAGTNDALVQWWYGHNAV
FT                   AFVFTVGIIAQIYYFLPKESGQPIFSYKLSLFAFWGLMFVYLWAGGHHLIYSTVPDWMQ
FT                   TMGSVFSIVLILPSWGSAINILLTMKGEWSQLRESPLIKFMILASTFYMFSTLEGPILS
FT                   IKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLMEAQFWIQ
FT                   TTGIVLYFASMWIAGITQGMMWRATDEYGNLLYSFIDTVVAIVPYYWIRAIGGLLYLIG
FT                   FFMFTYNIYKTIACGRVLDKEPKSASPMAA"
FT   gene            complement(1530511..1531191)
FT                   /locus_tag="C1336_000320028"
FT                   /note="C1336_000320028 identified by Glimmer3 with a raw
FT                   score of 11.01."
FT   CDS             complement(1530511..1531191)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320028"
FT                   /product="putative two-component regulator"
FT                   /note="C1336_000320028 identified by Glimmer3 with a raw
FT                   score of 11.01. Gene function extrapolated from C8J_1396
FT                   (CP000814.1) after blastn alignment (99.24 percent identity
FT                   over a 132 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30388.1"
FT                   /translation="MSQECKELIILVVEDEIKTRESLINVLSERFSKVIGAQNGDEGLK
FT                   KFKKFKPDLVITDIAMPIMDGLDMAREIKEISDDVPIVVLSAYSEKERLLRSIDIGIDK
FT                   YLIKPVDIEELFKVLDYLIGEKIEANMLVKISEEYQFNKTKRTLIYNGEEIVLTKKELA
FT                   FISLLLKQPGALVLHEDIKKNVWIGEHVSDTAVRTFIKRVRDKVGEDFIKNVPSLGYKI
FT                   NINK"
FT   gene            complement(1531194..1532405)
FT                   /locus_tag="C1336_000320029"
FT                   /note="C1336_000320029 identified by Glimmer3 with a raw
FT                   score of 9.27."
FT   CDS             complement(1531194..1532405)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320029"
FT                   /product="sensory box sensor histidine kinase, putative"
FT                   /note="C1336_000320029 identified by Glimmer3 with a raw
FT                   score of 9.27. Gene function extrapolated from
FT                   CJJ81176_1484 (CP000538.1) after blastn alignment (98.51
FT                   percent identity over a 403 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30389.1"
FT                   /translation="MKDFFKDQFFKALEKNTIFSRADVQGNLIFVSDKLCQISGYSKKE
FT                   LIGKKHSIFKHPDVDECYVEKLLKDLSYKKPYQVIFKNIDKLGKTFYLETLLIPILDKN
FT                   NELIEIVALSHDVSNSFKLNEELALNHAKLRELSINLENTVKNHQQEFIQLGKKFEKKM
FT                   KIALEKNEKDIKIAYEEILKSSLEQMISDIAHQWRQPLNELGIAMFQMKQNLKDEKGFA
FT                   EIYSQSKDMIKNMSETIDVFRTLFNKGVEQCVFIKETLNKALEIAFETIEKNHVNINIV
FT                   SKSDYEVLAYENGLIRVFLNLILNSIEAFKNKKRKIITINFSKFGKNYLKITIKDNAGG
FT                   IDKENLDKIFQPYFTTKHPSQGIGVGLYISRQIIESFQGKIKVKNGKDGACFEVFLKLK
FT                   ERVE"
FT   gene            complement(1532402..1532566)
FT                   /locus_tag="C1336_000320030"
FT                   /note="C1336_000320030 identified by Glimmer3 with a raw
FT                   score of 4.55."
FT   CDS             complement(1532402..1532566)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320030"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320030 identified by Glimmer3 with a raw
FT                   score of 4.55. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30390.1"
FT                   /translation="MMIFGISTLPAMLFFSKISQFFSDFLKNLFNYLSYGIIVCYGINL
FT                   AYIGFKAFQ"
FT   gene            1532607..1532750
FT                   /locus_tag="C1336_000320031"
FT                   /note="C1336_000320031 identified by Glimmer3 with a raw
FT                   score of 7.03."
FT   CDS             1532607..1532750
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320031"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320031 identified by Glimmer3 with a raw
FT                   score of 7.03. A blastn search against coding sequences
FT                   extracted from AL111168.1, CP000025.1, CP000538.1,
FT                   CP000768.1, CP000814.1 failed to identify a similar
FT                   sequence, and so no function could be assigned."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30391.1"
FT                   /translation="MAIKKYTNPQGTKPFENPKNIADFNPLKFLDFLIIFFTKLSKKHY
FT                   FQ"
FT   gene            complement(1532716..1533060)
FT                   /locus_tag="C1336_000320032"
FT                   /note="C1336_000320032 identified by Glimmer3 with a raw
FT                   score of 7.15."
FT   CDS             complement(1532716..1533060)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320032"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320032 identified by Glimmer3 with a raw
FT                   score of 7.15. Gene function extrapolated from C8J_1398
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 77 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30392.1"
FT                   /translation="MSIDFLAIISVAFLSSFGHCYSMCGGFNLLFINLNSKSNNLFLLT
FT                   FIYHLFRIFAYIVLGIIFGTFGNILAINAKVQSLSFFILGIFMMILGFALIFRGNMLSF
FT                   IENNVFLIVL"
FT   gene            complement(1533057..1534175)
FT                   /locus_tag="C1336_000320033"
FT                   /note="C1336_000320033 identified by Glimmer3 with a raw
FT                   score of 13.22."
FT   CDS             complement(1533057..1534175)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320033"
FT                   /product="carbamoyl-phosphate synthase, small subunit"
FT                   /note="C1336_000320033 identified by Glimmer3 with a raw
FT                   score of 13.22. Gene function extrapolated from
FT                   CJJ81176_1486 (CP000538.1) after blastn alignment (99.11
FT                   percent identity over a 1119 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30393.1"
FT                   /translation="MKAYIYLENDIFLSAKAFGKSGTFFGELVFNTSLTGYQEIISDPS
FT                   YAGQFIVFSMPEIGIVGTNENDNESKEIFASGVLMRELSSSFSNFRAKESLQDYLEKHG
FT                   KIGIYELDTRYLVKMIRNNGNLRAVISTEISNKEDLKIALEKSAKIDEVNFVKEVSTKK
FT                   NYSHKQGVWNASFQKFNDAKRSEKKVAVIDYGVKTNILNELVEVGFEVEVYPYNIKANE
FT                   LITLYKKGEIQGVFLSNGPGEPRILKQEIAEIKKLAEAKIPMLGICLGHQLLSNAFGYE
FT                   TYKMKFGQHGANHPVINLDTKTVEITAQNHNYNVPEELAQVAHITHRNLFGDNVEGVRY
FT                   KDYPIISVQHHPESSSGPHESKYIFKEFMNLM"
FT   gene            complement(1534175..1534726)
FT                   /locus_tag="C1336_000320034"
FT                   /note="C1336_000320034 identified by Glimmer3 with a raw
FT                   score of 14.18."
FT   CDS             complement(1534175..1534726)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320034"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320034 identified by Glimmer3 with a raw
FT                   score of 14.18. Gene function extrapolated from Cj1495c
FT                   (AL111168.1) after blastn alignment (99.44 percent identity
FT                   over a 533 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein Cj1495c' has
FT                   been renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30394.1"
FT                   /translation="MRIKLPHIPYIANKMMLDIANSSFVEIKDQLEKLKVCIIEVLEKD
FT                   ILNERKLDERVKELLEQQEDEMELMQVDRKNMFWLVKKKLAPEFNVILDSEDRHNHLAH
FT                   QILEELVENDYINFIVSENRVKNLIFSSIESYLKIYEKLEDEVYEKISNYKTKPIPGSE
FT                   EYDLIFEKLYQEELRKKGMF"
FT   gene            complement(1534819..1535337)
FT                   /locus_tag="C1336_000320035"
FT                   /note="C1336_000320035 identified by Glimmer3 with a raw
FT                   score of 12.95."
FT   CDS             complement(1534819..1535337)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320035"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320035 identified by Glimmer3 with a raw
FT                   score of 12.95. Gene function extrapolated from CJE1669
FT                   (CP000025.1) after blastn alignment (99.01 percent identity
FT                   over a 506 bp alignment) - for clarity, the original
FT                   product name 'conserved hypothetical protein' has been
FT                   renamed."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30395.1"
FT                   /translation="MIKKIILLVFISSVVFGAEQDCEQYFEARKAQIELQTREFDEARQ
FT                   SLEAYKASFEALQKERLENLEKKEAEVNATLAKIEELKLENVRLVEEQQKILNSINDKT
FT                   QGRVKEIYSQMKDAAIADVLSQMDAEDASKIMLSLESRKISGVLSKMDPKKASELTLLL
FT                   KNLDNNTSN"
FT   gene            complement(1535330..1535758)
FT                   /locus_tag="C1336_000320036"
FT                   /note="C1336_000320036 identified by Glimmer3 with a raw
FT                   score of 11.57."
FT   CDS             complement(1535330..1535758)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320036"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320036 identified by Glimmer3 with a raw
FT                   score of 11.57. Gene function extrapolated from C8J_1402
FT                   (CP000814.1) after blastn alignment (99.65 percent identity
FT                   over a 283 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30396.1"
FT                   /translation="MKSKYNSVVKVRKQQLDKAESNLNQAKQRQLEHEKAYELSRQECE
FT                   SLGVLPKSGSIADLRSNLSMAQVGREALARAKEKVELSKKEMNHYQFLYQKTHLDYEKM
FT                   KALETEEIKQKQKELAKAEEKFLDEIAISRFFKGEKDD"
FT   gene            complement(1535755..1537005)
FT                   /locus_tag="C1336_000320037"
FT                   /note="C1336_000320037 identified by Glimmer3 with a raw
FT                   score of 15.42."
FT   CDS             complement(1535755..1537005)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320037"
FT                   /product="adenylosuccinate synthetase"
FT                   /note="C1336_000320037 identified by Glimmer3 with a raw
FT                   score of 15.42. Gene function extrapolated from C8J_1403
FT                   (CP000814.1) after blastn alignment (99.76 percent identity
FT                   over a 1251 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30397.1"
FT                   /translation="MSKADIIVGIQWGDEGKGKVVDKLCENYDFVCRSAGGHNAGHTIW
FT                   VNGVRYALHLMPSGVLHPRCINIIGNGVVVSPEVLIAEMAQFENLKGRLYISDRAHLNL
FT                   KHHSLIDIAKEKLKGKNAIGTTGKGIGPSYADKINRTGHRVGELLEPQRLCEALMKDFE
FT                   ANKTFFEMLEIEIPSAEELLADLKRFNEILTPYITDTTRMLWKALDEDKRVLLEGAQGS
FT                   MLDIDHGTYPYVTSSSTISAGALTGLGLNPKEAGNIIGIVKAYATRVGNGAFPTEDKGE
FT                   DGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLMKLDVLDGFEKIKIC
FT                   RAYEYKGMEIDYIPSDLENVQPIYEEMDGWDKVFGIKDYDLLPENAKKYIARLEELAGV
FT                   KVKYISTSPERDDTIIL"
FT   gene            complement(1537033..1537130)
FT                   /locus_tag="C1336_000320111"
FT                   /note="Identified with tRNAscan-SE."
FT   tRNA            complement(1537033..1537130)
FT                   /locus_tag="C1336_000320111"
FT                   /product="tRNA-Sec"
FT                   /note="Identified with tRNAscan-SE."
FT   gene            1537270..1538478
FT                   /locus_tag="C1336_000320038"
FT                   /note="C1336_000320038 identified by Glimmer3 with a raw
FT                   score of 11.99."
FT   CDS             1537270..1538478
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320038"
FT                   /product="putative integral membrane protein"
FT                   /note="C1336_000320038 identified by Glimmer3 with a raw
FT                   score of 11.99. Gene function extrapolated from Cj1500
FT                   (AL111168.1) after blastn alignment (99.25 percent identity
FT                   over a 401 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30398.1"
FT                   /translation="MNSFKQKYLINFWDNSRSMIALGILSAVYFGIFGGVWAVTGEMTR
FT                   WGGEFLEFLGMNLDGYSYYQKQNLNGTPLTRTDGIMLIGMFIGCLVAALLANKVKFRLP
FT                   ASNIRIFQAIVGGILSGYGARLAFGCNLANFFTGLPYFSLHTWLFTVFMVLGIYLGVKI
FT                   CNTSFFKPKAKLERVNKENLPLNKQSLRTKLYFNLGILLFIAFLVWVFYLVFTNGNIST
FT                   QNKQSLLALALIFGFVFGFVISRGQICFTSCFRDLFLFGRDNAIKGALISMIIASLIAF
FT                   AFILQGHTSKLIELSPAVAVGAFLFGFGIVFAGGCECGWAYRAFEGQSHFMIVGIANII
FT                   GTMILALSYDFLPKAFKEGIKINLLTEFGNLNGFFINLILFILMFAFVVFYKKHFFKNQ
FT                   LKG"
FT   gene            1538482..1538709
FT                   /locus_tag="C1336_000320039"
FT                   /note="C1336_000320039 identified by Glimmer3 with a raw
FT                   score of 11.11."
FT   CDS             1538482..1538709
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320039"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320039 identified by Glimmer3 with a raw
FT                   score of 11.11. Gene function extrapolated from C8J_1404
FT                   (CP000814.1) after blastn alignment (96.92 percent identity
FT                   over a 227 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30399.1"
FT                   /translation="MKITYSLNLQGEACPYPAIATLDVLPKLQSGEILEVLCDCPQSIN
FT                   SIPQDAKNRGFKVLEIDQSGSTLRFLIQKP"
FT   gene            complement(1538724..1540193)
FT                   /locus_tag="C1336_000320040"
FT                   /note="C1336_000320040 identified by Glimmer3 with a raw
FT                   score of 13.00."
FT   CDS             complement(1538724..1540193)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320040"
FT                   /product="sodium/proline symporter"
FT                   /note="C1336_000320040 identified by Glimmer3 with a raw
FT                   score of 13.00. Gene function extrapolated from C8J_1405
FT                   (CP000814.1) after blastn alignment (97.28 percent identity
FT                   over a 1470 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30400.1"
FT                   /translation="MEVVQINTPIAVMFVVYALLMLYIGFYFYKQNKNSEDYFLGGRTM
FT                   GPVISALSAGASDMSGWLLMGLPGALYVSGFIDSYIAIGLTIGASLNWIFVAKRLRIYT
FT                   SVIANSLTIPDYFETRFDDDKHILRIVCAVVILIFFTFYVSSGLVSGAKLFESTFGIRY
FT                   DYALTTGTIIIVAYTFLGGYKAVCWTDMIQGLLMMMALIIVPLVMLYHLGGFGEAVNIV
FT                   REIKPQALSMGEGVGVISIISALAWGLGYFGQPHILVRFMSIRSTKDIPMATFIGIAWM
FT                   VVCLLSACMIGILGIAYVHKFELSLQDPEKIFIVMSQLLFNPWIAGILLSAILAAIMST
FT                   ASSQLLVSSSTIAEDFYKKIFREDAPSHVVLNLGKLGVLLVAVIAFLISTDKNSSVLSI
FT                   VSYAWAGFGASFGSVMLFSLFWSRMTRVGAILGMITGAATVVLWKNFANSGLYEIVPGF
FT                   LAASAVIIIASLFTNVRSGTKAAYEKMLKEL"
FT   gene            complement(1540211..1543699)
FT                   /locus_tag="C1336_000320041"
FT                   /note="C1336_000320041 identified by Glimmer3 with a raw
FT                   score of 14.63."
FT   CDS             complement(1540211..1543699)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320041"
FT                   /product="putative proline
FT                   dehydrogenase/delta-1-pyrroline-5-carboxylate
FT                   dehydrogenase"
FT                   /note="C1336_000320041 identified by Glimmer3 with a raw
FT                   score of 14.63. Gene function extrapolated from Cj1503c
FT                   (AL111168.1) after blastn alignment (100.00 percent
FT                   identity over a 223 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30401.1"
FT                   /translation="MIQKALALAEELQGQIEANISNSEKEFHAKMQKLLNNPKNKVMLI
FT                   ELLDRSFRCKDKNASFELIEYTLSKYGIADFFSTFEKFLLFSFLNFGKFAPNLSVPFFV
FT                   KHLREDTKAMVLDANPSVLEPHIKKRKEQDKITLNVNLIGEEVLGEAESKYRMQKYEEA
FT                   LKSSYITYISIKITTIFSQINIIDFDYSKEEVVKRLDYLYALALEEEKKQGVSKFINLD
FT                   MEEFRDLELTVAAFIESVAKFDIKAGIVLQAYIPDSYKYLKKLFAFSKERVLKGMKPIK
FT                   IRFVKGANMESEETIASQKGWELPTFYKKIDTDSNYNKMLDFILEGDNYKYINIGIASH
FT                   NIFEIAYAYTRISEVGALDSFTFEMLEGMSLQCSYELSKMHDLILYAPVCDEAHFNNAI
FT                   AYLVRRLDENTSEDNFMRYFFNLKVGDKNWNIQKELFLKSLEGIKTLDNTTHRKQDRNK
FT                   ESNIISSYESKKFSNESDTDFILAQNRAWAKEIKTKYENLKDYDVYPVIGELDFKAENL
FT                   NVLEVKDKIEDRVIGKAYLAGEKEIKQALEVAKNSKYTQKSHDEIYQILAKSAKLMRER
FT                   RGDLIGLAALEVGKTFLEIDPEVSEAIDFIEFYPHSLEELKKQNPKVKFTPKGIGVTIA
FT                   PWNFPIGISVGTIAAPLAAGNVVIYKPSSLSTLTGYMLCKCFWDAGIPKDALIFLPSKG
FT                   SDISKYLLVDEAIKFSILTGGEDTAYAMLKANPTLLLSAETGGKNATIVSKFADRDSAI
FT                   KNIIHSAFSNSGQKCSATSLLVLEEEVYHDEEFKKTLVDAASSMAVGSPFEFKNKLGAL
FT                   ADKPSSKVQKALDELQPYEEWALKPKFLEDNPYLMTPGIKYGTKKGDFTHMNELFVPIL
FT                   SVMKAKDLKEAIDIVNSTGYGLTAGFESLDEREWEYFHTHIEAGNIYINKPTTGAIVLR
FT                   QPFGGIKKSAIGLGRKVGIYNYITQFLEIKQEDFDDYLIEDKFSKKLAQIDLKEAQDFM
FT                   NDLIKMSQSYAYHYKNEFSVSKDYVNIRGEDNLFSYTKIKNMVLRLCGNESLKDVLGVV
FT                   LGANIANIDLGISYDEQDISMIERIVQSIGAKVLFLKENKENFIKSIKEYERVRYLAKP
FT                   DVNDEIYKEAAKLAKIIIREKPLLNGRFELLNYFNEKALSISFHRYGNLGIRAIS"
FT   gene            complement(1543830..1544756)
FT                   /locus_tag="C1336_000320042"
FT                   /note="C1336_000320042 identified by Glimmer3 with a raw
FT                   score of 16.40."
FT   CDS             complement(1543830..1544756)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320042"
FT                   /product="putative selenide,water dikinase"
FT                   /note="C1336_000320042 identified by Glimmer3 with a raw
FT                   score of 16.40. Gene function extrapolated from C8J_1407
FT                   (CP000814.1) after blastn alignment (97.52 percent identity
FT                   over a 927 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30402.1"
FT                   /translation="MQKTPALLSDIGNNEDASVYQISRDLALVQTLDFITPIVDSAYHF
FT                   GAIAAANALSDVFAMGAEAINALNIVGFDTCNHDLNILKELLEGANDKVQECNALVVGG
FT                   HTIESTELFFGLSVTGKVHPSKFIANNTSKVGDCIILTKPLGTGILSTALKAQMLNQKH
FT                   LDIMLKSMMELNYKASQIALKFHPSAMSDVTGFGLLGHLKEMLNKNISFEIFESELPFL
FT                   DGVKEYFNMGLIPAGAYKNLEFIKELTPDLNEEKLLLCDPQTSGGLLISISEKDSLECL
FT                   KKLEDENIQAKIIAKVVNKQENDIIIS"
FT   gene            complement(1544863..1545435)
FT                   /locus_tag="C1336_000320043"
FT                   /note="C1336_000320043 identified by Glimmer3 with a raw
FT                   score of 15.27."
FT   CDS             complement(1544863..1545435)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320043"
FT                   /product="hypothetical protein"
FT                   /note="C1336_000320043 identified by Glimmer3 with a raw
FT                   score of 15.27. Gene function extrapolated from C8J_1408
FT                   (CP000814.1) after blastn alignment (100.00 percent
FT                   identity over a 76 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30403.1"
FT                   /translation="MKIDCRNLSCPQPIVETKNALEKLQENEILEIVLNSIISKNNVVK
FT                   FLNSLNLNPIIDENAQEFCIKVQKKNFNSSEINVHDYNVLFLKTDKVGEGELGQNLLVG
FT                   FLSTLKNLDHAPSKILCVNESVLINVDENHKAHLAMKELENLGIEIISCGACLEFFNKS
FT                   KELKIGNIGNAYEILNELFGKAKIITL"
FT   gene            complement(1545546..1547648)
FT                   /locus_tag="C1336_000320044"
FT                   /note="C1336_000320044 identified by Glimmer3 with a raw
FT                   score of 11.33."
FT   CDS             complement(1545546..1547648)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320044"
FT                   /product="methyl-accepting chemotaxis protein"
FT                   /note="C1336_000320044 identified by Glimmer3 with a raw
FT                   score of 11.33. Gene function extrapolated from C8J_1409
FT                   (CP000814.1) after blastn alignment (97.35 percent identity
FT                   over a 1056 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30404.1"
FT                   /translation="MFKSLNIGLKLIFSVATVVVIGLIILISLITKQVSQNITKNTEDI
FT                   LASITKEYATQTQGIFGEMIALNKSISGTLTEMFRSTSKENLDIDSITNIITNTFDNSA
FT                   YSNFTYLYLIDPPEYFKEESKFFNTQSGKFVMLYVDEEKDSKGGIKAIQASDEIANLQV
FT                   VQDILKKAKYGENKVYIGRPIRMNLEGQDFDAVNIAMPIFDRKNQVVGVIGMTLNFSAI
FT                   ATYLLDPKSQKYDGELRVLLNSDGLVAIHPNKNLVLKNLKDVNPNKGAQETYKAMSEGK
FT                   NGVFNYIAFDGDDSYAAINSFKVQDSSWTVLVTAPKYSVFEPLKKLQLIIISASFIFIF
FT                   VVLGVVYYCVRKIVATRLPIILNSLESFFRFLNHEKIELKLIKIRANDELGAMGRIINE
FT                   NIEKIQISLEQDQNAVDESVQTAKEIEKGNLTARITKNPINPQLVELKNVLNRMLDVLQ
FT                   SKIGSNMNEINRVFDSYKALDFSTEVLDAKGEVEITTNILGKEIKKMLVASSNFAKDLA
FT                   NQSEELKNSMQKLADGSNAQASSLEQSAAAVEEINSSMQNVSGKTVEVASQADDIKNIV
FT                   NVIKDIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRQLAERTGKSLSEIEANINIL
FT                   VQSVNEVAESVKEQTAGITQINDAIAQLETVTKENVEVANVTNNITNEVNQIAAAILED
FT                   VNKKRF"
FT   gene            complement(1547760..1548497)
FT                   /locus_tag="C1336_000320045"
FT                   /note="C1336_000320045 identified by Glimmer3 with a raw
FT                   score of 10.72."
FT   CDS             complement(1547760..1548497)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320045"
FT                   /product="ModE repressor domain protein"
FT                   /note="C1336_000320045 identified by Glimmer3 with a raw
FT                   score of 10.72. Gene function extrapolated from
FT                   CJJ81176_1499 (CP000538.1) after blastn alignment (98.70
FT                   percent identity over a 692 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30405.1"
FT                   /translation="MDKNQEKEIISYMRELLNSNEKLDCGTAFKIAKKFNINIEKIGQL
FT                   ADENHMRIDNCELGQFGHLDFEKAKIEVLKKIEPSLDEKRRIFCKDARDIAKEGCGLKS
FT                   MRSALKAYKVDVKYCQLGCFKEKKGKQFIVRTKTWIENADGDLLFGRGKTELLELIGQT
FT                   GSLLHASKLMGINYKKAWMHLQTLQKNSQEILVSTRQGRSKESGTKLTPRALELMENYS
FT                   ILQKDIEEYANKRFKELFLKGKK"
FT   gene            complement(1548490..1549272)
FT                   /locus_tag="C1336_000320046"
FT                   /note="C1336_000320046 identified by Glimmer3 with a raw
FT                   score of 11.89."
FT   CDS             complement(1548490..1549272)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320046"
FT                   /product="formate dehydrogenase accessory protein FdhD"
FT                   /note="C1336_000320046 identified by Glimmer3 with a raw
FT                   score of 11.89. Gene function extrapolated from
FT                   CJJ81176_1500 (CP000538.1) after blastn alignment (97.45
FT                   percent identity over a 783 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30406.1"
FT                   /translation="MDPLFTTQILKYKGDESFTCDDTLVREIKLEIFINDEKVGALMAT
FT                   PVDEQALAIGYLMSENIIAKVSDIENIETKDDGMSVHIKAKIDKENLAKLNAEGVVISG
FT                   CGRAHTANIDLEAIEASKISSDVKFSKDEILKQMSTFYTQCELYEKTGCVHTAKLFVNE
FT                   KTFFIGEDIAQHNTIDKALGKARLAGVDLSQCFLMVSGRLSSEMVAKAVMHKIPVLVSR
FT                   TAPTCLGVMIARKFDLTLCGFARENKINIYSGEFRIHG"
FT   gene            complement(1549439..1550371)
FT                   /locus_tag="C1336_000320047"
FT                   /note="C1336_000320047 identified by Glimmer3 with a raw
FT                   score of 9.16."
FT   CDS             complement(1549439..1550371)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320047"
FT                   /product="formate dehydrogenase, cytochrome b subunit"
FT                   /note="C1336_000320047 identified by Glimmer3 with a raw
FT                   score of 9.16. Gene function extrapolated from CJE1682
FT                   (CP000025.1) after blastn alignment (99.25 percent identity
FT                   over a 933 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30407.1"
FT                   /translation="MRKVFVTLLLSVVNLFAYGSERMGQDTQIWDFHRITNIPNYDTFG
FT                   KLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHFIA
FT                   AISWVILVPTGFVMMFGATFGGGLFVRVCKNLHAFATVLFIISIIPMFLWWIKRMLPAS
FT                   YDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDFNSTA
FT                   IQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYKEEEEV
FT                   YILHSYWYKELSNKKQIEPSFSYDPNVKI"
FT   gene            complement(1550368..1551009)
FT                   /locus_tag="C1336_000320048"
FT                   /note="C1336_000320048 identified by Glimmer3 with a raw
FT                   score of 9.83."
FT   CDS             complement(1550368..1551009)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320048"
FT                   /product="formate dehydrogenase, iron-sulfur subunit"
FT                   /note="C1336_000320048 identified by Glimmer3 with a raw
FT                   score of 9.83. Gene function extrapolated from
FT                   CJJ81176_1502 (CP000538.1) after blastn alignment (99.38
FT                   percent identity over a 642 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30408.1"
FT                   /translation="MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIRR
FT                   RRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYC
FT                   LYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCA
FT                   AMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL"
FT   gene            complement(1551006..1553810)
FT                   /pseudo
FT                   /locus_tag="C1336_000320106"
FT                   /note="Features C1336_000320049, C1336_000320050 joined to
FT                   form C1336_000320106 to correct 454 sequencing error
FT                   (C1336_000320049 identified by Glimmer3 with a raw score of
FT                   14.99, C1336_000320050 identified by Glimmer3 with a raw
FT                   score of 16.10)."
FT   CDS             complement(join(1551006..1553219,1553268..1553810))
FT                   /pseudo
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320106"
FT                   /note="Features C1336_000320049, C1336_000320050 joined to
FT                   form C1336_000320106 to correct 454 sequencing error
FT                   (C1336_000320049 identified by Glimmer3 with a raw score of
FT                   14.99, C1336_000320050 identified by Glimmer3 with a raw
FT                   score of 16.10). Yet to account for left and right orfs in
FT                   same frame and so set to pseudogene."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /artificial_location="low-quality sequence region"
FT   gene            complement(1553810..1554001)
FT                   /locus_tag="C1336_000320051"
FT                   /note="C1336_000320051 identified by Glimmer3 with a raw
FT                   score of 14.32."
FT   CDS             complement(1553810..1554001)
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="C1336_000320051"
FT                   /product="possible periplasmic protein"
FT                   /note="C1336_000320051 identified by Glimmer3 with a raw
FT                   score of 14.32. Gene function extrapolated from C8J_1416
FT                   (CP000814.1) after blastn alignment (98.84 percent identity
FT                   over a 86 bp alignment)."
FT                   /inference="ab initio prediction:Glimmer:3"
FT                   /protein_id="EFC30409.1"
FT                   /translation="MKNRREFLKKSAFALGAAGVLGSTTLALAKDKERKDLVKGKSKKK
FT                   EVLFQRSANWENYYIKAE"
FT   gene            complement(1553976..1554689)
FT                   /locus_tag="C1336_000320052"
FT                   /note="C1336_000320052 identified by Glimmer3 with a raw
FT                   score of 12.17."