ID CM000681; SV 1; linear; genomic DNA; CON; HUM; 59128983 BP. XX AC CM000681; XX PR Project:PRJNA31257; XX DT 09-MAR-2009 (Rel. 100, Created) DT 29-SEP-2009 (Rel. 102, Last updated, Version 2) XX DE Homo sapiens chromosome 19, GRCh37 primary reference assembly. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC Erratum:[Nature 2001 Aug 2;412(6846):565] RP 1-59128983 RX DOI; 10.1038/35057062. RX PUBMED; 11237011. RG International Human Genome Sequencing Consortium RA Lander E.S., Linton L.M., Birren B., Nusbaum C., Zody M.C., Baldwin J., RA Devon K., Dewar K., Doyle M., FitzHugh W., Funke R., Gage D., Harris K., RA Heaford A., Howland J., Kann L., Lehoczky J., LeVine R., McEwan P., RA McKernan K., Meldrim J., Mesirov J.P., Miranda C., Morris W., Naylor J., RA Raymond C., Rosetti M., Santos R., Sheridan A., Sougnez C., RA Stange-Thomann N., Stojanovic N., Subramanian A., Wyman D., Rogers J., RA Sulston J., Ainscough R., Beck S., Bentley D., Burton J., Clee C., RA Carter N., Coulson A., Deadman R., Deloukas P., Dunham A., Dunham I., RA Durbin R., French L., Grafham D., Gregory S., Hubbard T., Humphray S., RA Hunt A., Jones M., Lloyd C., McMurray A., Matthews L., Mercer S., Milne S., RA Mullikin J.C., Mungall A., Plumb R., Ross M., Shownkeen R., Sims S., RA Waterston R.H., Wilson R.K., Hillier L.W., McPherson J.D., Marra M.A., RA Mardis E.R., Fulton L.A., Chinwalla A.T., Pepin K.H., Gish W.R., RA Chissoe S.L., Wendl M.C., Delehaunty K.D., Miner T.L., Delehaunty A., RA Kramer J.B., Cook L.L., Fulton R.S., Johnson D.L., Minx P.J., Clifton S.W., RA Hawkins T., Branscomb E., Predki P., Richardson P., Wenning S., Slezak T., RA Doggett N., Cheng J.F., Olsen A., Lucas S., Elkin C., Uberbacher E., RA Frazier M., Gibbs R.A., Muzny D.M., Scherer S.E., Bouck J.B., RA Sodergren E.J., Worley K.C., Rives C.M., Gorrell J.H., Metzker M.L., RA Naylor S.L., Kucherlapati R.S., Nelson D.L., Weinstock G.M., Sakaki Y., RA Fujiyama A., Hattori M., Yada T., Toyoda A., Itoh T., Kawagoe C., RA Watanabe H., Totoki Y., Taylor T., Weissenbach J., Heilig R., Saurin W., RA Artiguenave F., Brottier P., Bruls T., Pelletier E., Robert C., Wincker P., RA Smith D.R., Doucette-Stamm L., Rubenfield M., Weinstock K., Lee H.M., RA Dubois J., Rosenthal A., Platzer M., Nyakatura G., Taudien S., Rump A., RA Yang H., Yu J., Wang J., Huang G., Gu J., Hood L., Rowen L., Madan A., RA Qin S., Davis R.W., Federspiel N.A., Abola A.P., Proctor M.J., Myers R.M., RA Schmutz J., Dickson M., Grimwood J., Cox D.R., Olson M.V., Kaul R., RA Raymond C., Shimizu N., Kawasaki K., Minoshima S., Evans G.A., RA Athanasiou M., Schultz R., Roe B.A., Chen F., Pan H., Ramser J., RA Lehrach H., Reinhardt R., McCombie W.R., de la Bastide M., Dedhia N., RA Blocker H., Hornischer K., Nordsiek G., Agarwala R., Aravind L., RA Bailey J.A., Bateman A., Batzoglou S., Birney E., Bork P., Brown D.G., RA Burge C.B., Cerutti L., Chen H.C., Church D., Clamp M., Copley R.R., RA Doerks T., Eddy S.R., Eichler E.E., Furey T.S., Galagan J., Gilbert J.G., RA Harmon C., Hayashizaki Y., Haussler D., Hermjakob H., Hokamp K., Jang W., RA Johnson L.S., Jones T.A., Kasif S., Kaspryzk A., Kennedy S., Kent W.J., RA Kitts P., Koonin E.V., Korf I., Kulp D., Lancet D., Lowe T.M., RA McLysaght A., Mikkelsen T., Moran J.V., Mulder N., Pollara V.J., RA Ponting C.P., Schuler G., Schultz J., Slater G., Smit A.F., Stupka E., RA Szustakowski J., Thierry-Mieg D., Thierry-Mieg J., Wagner L., Wallis J., RA Wheeler R., Williams A., Wolf Y.I., Wolfe K.H., Yang S.P., Yeh R.F., RA Collins F., Guyer M.S., Peterson J., Felsenfeld A., Wetterstrand K.A., RA Patrinos A., Morgan M.J., de Jong P., Catanese J.J., Osoegawa K., RA Shizuya H., Choi S., Chen Y.J.; RT "Initial sequencing and analysis of the human genome"; RL Nature 409(6822):860-921(2001). XX RN [2] RP 1-59128983 RX DOI; 10.1038/nature02399. RX PUBMED; 15057824. RA Grimwood J., Gordon L.A., Olsen A., Terry A., Schmutz J., Lamerdin J., RA Hellsten U., Goodstein D., Couronne O., Tran-Gyamfi M., Aerts A., RA Altherr M., Ashworth L., Bajorek E., Black S., Branscomb E., Caenepeel S., RA Carrano A., Caoile C., Chan Y.M., Christensen M., Cleland C.A., RA Copeland A., Dalin E., Dehal P., Denys M., Detter J.C., Escobar J., RA Flowers D., Fotopulos D., Garcia C., Georgescu A.M., Glavina T., Gomez M., RA Gonzales E., Groza M., Hammon N., Hawkins T., Haydu L., Ho I., Huang W., RA Israni S., Jett J., Kadner K., Kimball H., Kobayashi A., Larionov V., RA Leem S.H., Lopez F., Lou Y., Lowry S., Malfatti S., Martinez D., RA McCready P., Medina C., Morgan J., Nelson K., Nolan M., Ovcharenko I., RA Pitluck S., Pollard M., Popkie A.P., Predki P., Quan G., Ramirez L., RA Rash S., Retterer J., Rodriguez A., Rogers S., Salamov A., Salazar A., RA She X., Smith D., Slezak T., Solovyev V., Thayer N., Tice H., Tsai M., RA Ustaszewska A., Vo N., Wagner M., Wheeler J., Wu K., Xie G., Yang J., RA Dubchak I., Furey T.S., DeJong P., Dickson M., Gordon D., Eichler E.E., RA Pennacchio L.A., Richardson P., Stubbs L., Rokhsar D.S., Myers R.M., RA Rubin E.M., Lucas S.M.; RT "The DNA sequence and biology of human chromosome 19"; RL Nature 428(6982):529-535(2004). XX RN [3] RP 1-59128983 RX DOI; 10.1038/nature03001. RX PUBMED; 15496913. RG International Human Genome Sequencing Consortium RA ; RT "Finishing the euchromatic sequence of the human genome"; RL Nature 431(7011):931-945(2004). XX RN [4] RP 1-59128983 RG Genome Reference Consortium RA ; RT ; RL Submitted (24-FEB-2009) to the INSDC. RL NCBI, NIH, Bethesda, MD 20892, USA XX CC The DNA sequence is composed of genomic sequence, primarily CC finished clones that were sequenced as part of the Human Genome CC Project. PCR products and WGS shotgun sequence have been added CC where necessary to fill gaps or correct errors. All such additions CC are manually curated by GRC staff. For more information see: CC http://genomereference.org. XX CO join(gap(10000),gap(50000),GL000137.1:1..7286004,gap(50000), CO GL000138.1:1..1291194,gap(50000),GL000139.1:1..15894584,gap(50000), CO gap(3000000),gap(50000),GL000140.1:1..31387201,gap(10000)) XX FH Key Location/Qualifiers FH FT source 1..59128983 FT /organism="Homo sapiens" FT /chromosome="19" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gap 1..10000 FT /estimated_length=10000 FT gap 10001..60000 FT /estimated_length=50000 FT misc_feature 291431..291670 FT /note="NOTE: Shatter libraries failed to resolve the FT dinucleotide repeat region 59363-59602. Unsure number of FT repeat copies 59363-59602. Forced join 59548." FT misc_feature 350064..351351 FT /note="NOTE: Unresolved repeat region 117996-119283. FT Unsure number of repeat copies 117996-119283." FT misc_feature 380882..382012 FT /note="NOTE: 16818-17948 Unsure Number of Repeats" FT misc_feature join(399680..400978,410713..411542) FT /note="NOTE: Unsure number of repeat copies 10760-12058 and FT 21793-22622." FT misc_feature 431096..434189 FT /note="NOTE: Unresolved tandem repeat 16123-19216." FT misc_feature 442998..443549 FT /note="28025-28576 is representative of sequence from FT AC006124 only." FT misc_feature complement(467649..467751) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 75.000" FT repeat_region 468084..468380 FT /rpt_family="AluJb" FT repeat_region 468448..468557 FT /rpt_family="MIR" FT repeat_region complement(469221..469391) FT /rpt_family="AluJb" FT repeat_region 469408..469710 FT /rpt_family="AluSx" FT repeat_region complement(470205..470510) FT /rpt_family="AluY" FT repeat_region complement(471147..471447) FT /rpt_family="AluY" FT repeat_region complement(471453..471621) FT /rpt_family="AluJo" FT repeat_region complement(471693..471738) FT /rpt_family="(TAA)n" FT repeat_region complement(471741..472044) FT /rpt_family="AluY" FT repeat_region complement(472045..472122) FT /rpt_family="MIR" FT repeat_region complement(472201..472256) FT /rpt_family="MIR" FT misc_feature complement(472400..472501) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 80.000" FT repeat_region 474353..474397 FT /rpt_family="LINE2" FT misc_feature complement(474621..474747) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 78.000" FT repeat_region complement(475159..475213) FT /rpt_family="MIR" FT repeat_region complement(475270..475356) FT /rpt_family="LINE2" FT repeat_region complement(475777..475985) FT /rpt_family="AluSg/x" FT repeat_region complement(475997..476185) FT /rpt_family="AluSg/x" FT repeat_region complement(476289..476489) FT /rpt_family="AluSx" FT repeat_region 476608..476922 FT /rpt_family="L1" FT repeat_region 476925..477186 FT /rpt_family="AluJb" FT repeat_region 477292..477608 FT /rpt_family="AluSx" FT repeat_region complement(477668..477816) FT /rpt_family="AluY" FT repeat_region complement(478891..479029) FT /rpt_family="LINE2" FT repeat_region 479046..479391 FT /rpt_family="LTR3" FT repeat_region complement(479392..479701) FT /rpt_family="AluSg" FT repeat_region complement(479705..479835) FT /rpt_family="AluSg" FT repeat_region complement(480030..480249) FT /rpt_family="LINE2" FT repeat_region complement(480420..480540) FT /rpt_family="(CAT)n" FT repeat_region 480724..480915 FT /rpt_family="(CAT)n" FT repeat_region complement(480988..481110) FT /rpt_family="(CAT)n" FT repeat_region complement(481204..481322) FT /rpt_family="(CAT)n" FT misc_feature 481579..481710 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 89.000" FT repeat_region complement(481772..482075) FT /rpt_family="AluJo" FT repeat_region complement(482078..482335) FT /rpt_family="MER33" FT repeat_region 482372..482480 FT /rpt_family="MER20" FT repeat_region 482966..483064 FT /rpt_family="MIR" FT repeat_region 483526..483674 FT /rpt_family="MER20" FT repeat_region complement(484098..484137) FT /rpt_family="(GAAAA)n" FT repeat_region complement(484140..484440) FT /rpt_family="AluSp" FT repeat_region complement(484441..484509) FT /rpt_family="AluJ/FRAM" FT repeat_region complement(484538..485095) FT /rpt_family="LINE2" FT repeat_region 485197..485303 FT /rpt_family="(CA)n" FT misc_feature 485298..485383 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 67.000" FT repeat_region complement(485480..485666) FT /rpt_family="AluJ/FLAM" FT repeat_region complement(486145..486180) FT /rpt_family="MIR" FT repeat_region complement(486439..486632) FT /rpt_family="AluSx" FT repeat_region 486633..486933 FT /rpt_family="AluY" FT repeat_region complement(486934..487051) FT /rpt_family="AluSx" FT repeat_region complement(487243..487344) FT /rpt_family="MER63B" FT repeat_region 487413..487521 FT /rpt_family="LINE2" FT repeat_region 487523..487682 FT /rpt_family="AluSg/x" FT repeat_region 487687..487749 FT /rpt_family="AluSq/x" FT repeat_region 487753..488211 FT /rpt_family="LTR2" FT repeat_region 488241..488539 FT /rpt_family="AluY" FT repeat_region complement(488697..488747) FT /rpt_family="GC_rich" FT repeat_region complement(488838..488904) FT /rpt_family="GC_rich" FT repeat_region 489052..489077 FT /rpt_family="GC_rich" FT repeat_region complement(489646..489749) FT /rpt_family="MER20" FT repeat_region 490074..490376 FT /rpt_family="AluSq" FT repeat_region complement(490399..490518) FT /rpt_family="MER33" FT repeat_region 490683..490816 FT /rpt_family="AluSp" FT repeat_region 490817..491110 FT /rpt_family="AluSx" FT repeat_region 491113..491286 FT /rpt_family="AluSg/x" FT repeat_region complement(492589..492889) FT /rpt_family="AluY" FT repeat_region complement(492895..493026) FT /rpt_family="AluY" FT repeat_region complement(493098..493159) FT /rpt_family="(CATG)n" FT misc_feature complement(493597..493709) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 66.000" FT repeat_region complement(493909..494028) FT /rpt_family="(GA)n" FT repeat_region complement(493999..494124) FT /rpt_family="(GGGA)n" FT repeat_region 495852..496146 FT /rpt_family="AluSp" FT mRNA join(496490..496551,497833..498117,498496..498825, FT 501669..501929,504745..505347) FT /product="Human vascular addressin (MAdCAM-1) mRNA" FT mRNA join(496500..496551,497833..498117,498496..498825, FT 501669..501929,504745..505342) FT /product="Human mucosal addressin cell adhesion molecule-1 FT (MAdCAM-1) mRNA" FT CDS join(496500..496551,497833..498117,498496..498825, FT 501669..501929,504745..504965) FT /codon_start=1 FT /product="vascular addressin MAdCAM-1" FT /function="endothelial cell adhesion molecule" FT /function="transmembrane protein" FT /note="product translated from genomic sequence; Product FT translated from genomic sequence contains several extra FT repeated residues not found in cDNAs for vascular addressin FT MAdCAM-1 (U82483) and mucosal addressin cell adhesion FT molecule-1 (U43628)" FT /protein_id="AAC62844.1" FT /translation="MDFGLALLLAGLLGLLLGQSLQVKPLQVEPPEPVVAVALGASRQL FT TCRLACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQ FT HTVQLLVYAFPDQLTVSPAALVPGDPEVACTAHKVTPVDPNALSFSLLVGGQELEGAQA FT LGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLELSHRQAIP FT VLHSPTSPEPPDTTSPESPDTTSPESPDTTSQEPPDTTSPEPPDKTSPEPAPQQGSTHT FT PRSPGSTRTRRPEISQAGPTQGEVIPTGSSKPAGDQLPAALWTSSAVLGLLLLALPTYH FT LWKRCRHLAEDDTHPPASLRLLPQVSAWAGLRGTGQVGISPS" FT repeat_region 496888..497001 FT /rpt_family="(GGGA)n" FT repeat_region 497045..497161 FT /rpt_family="(GA)n" FT repeat_region 497337..497461 FT /rpt_family="(GGGA)n" FT repeat_region complement(497684..497807) FT /rpt_family="GC_rich" FT repeat_region 498656..498697 FT /rpt_family="(GGA)n" FT repeat_region 499011..499384 FT /rpt_family="LINE2" FT repeat_region 499397..499515 FT /rpt_family="(CA)n" FT repeat_region 499691..499770 FT /rpt_family="LINE2" FT repeat_region complement(500208..500322) FT /rpt_family="MIR" FT repeat_region 500350..500378 FT /rpt_family="MIR" FT repeat_region 500461..500584 FT /rpt_family="AluSq/x" FT repeat_region 500589..500884 FT /rpt_family="AluSg" FT repeat_region 500944..501200 FT /rpt_family="AluJb" FT repeat_region 501204..501505 FT /rpt_family="AluSp" FT misc_feature 501754..501929 FT /note="BLASTN similarity to T54705 (1..175); match: 1, FT score: 1.2e-62; database searched: est; yb41c04.r1 Homo FT sapiens cDNA clone 73734 5' contains MSR1 repetitive FT element." FT repeat_region complement(502300..502601) FT /rpt_family="AluSx" FT repeat_region complement(502613..503061) FT /rpt_family="LTR10C" FT repeat_region 503201..503297 FT /rpt_family="AluY" FT repeat_region 503300..503594 FT /rpt_family="AluY" FT repeat_region 503620..503761 FT /rpt_family="FRAM" FT repeat_region 503767..504069 FT /rpt_family="AluSx" FT repeat_region complement(504078..504223) FT /rpt_family="MER33" FT repeat_region complement(504260..504557) FT /rpt_family="AluSg" FT misc_feature complement(504905..505010) FT /note="BLASTN similarity to AI131233 (333..438); match: 1, FT score: 6.2e-35; database searched: month.na; qc16b02.x1 FT Soares_fetal_heart_NbHH19W Homo sapiens cDNA clone FT IMAGE:1709739 3' similar to contains MER4.b1 MER4 FT repetitive" FT repeat_region 505011..505322 FT /rpt_family="MER4A2" FT repeat_region complement(505485..505968) FT /rpt_family="LTR10C" FT repeat_region complement(506028..506328) FT /rpt_family="AluY" FT repeat_region complement(506329..506438) FT /rpt_family="LTR10C" FT misc_feature 506898..506972 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 73.000" FT misc_feature 507507..507844 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 83.000" FT repeat_region complement(507583..507603) FT /rpt_family="GC_rich" FT repeat_region 507749..507774 FT /rpt_family="GC_rich" FT repeat_region complement(507902..507948) FT /rpt_family="GC_rich" FT repeat_region complement(509398..509768) FT /rpt_family="MLT1C" FT repeat_region 510093..510390 FT /rpt_family="AluY" FT repeat_region complement(510633..510740) FT /rpt_family="MIR" FT repeat_region complement(510851..510976) FT /rpt_family="MER20" FT misc_feature complement(511263..511357) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 97.000" FT repeat_region complement(511871..512112) FT /rpt_family="AluSx" FT misc_feature 540125..540853 FT /note="NOTE: Tandem repeat 8607-9335. Unsure number of FT repeat copies 8607-9335." FT misc_feature 570580..570836 FT /note="NOTE: Shatter libraries failed to verify FT dinucleotide repeat region 11849-12105. Unsure number of FT repeat copies 11849-12105. Forced join 11949." FT misc_feature 572177..597568 FT /note="Overlap with cosmid R33619 (LLNLR-299A11, AC009005)" FT repeat_region 589671..589791 FT /rpt_family="GC_rich" FT repeat_region complement(589793..589885) FT /rpt_family="(GGGA)n" FT repeat_region complement(589891..589990) FT /rpt_family="GC_rich" FT mRNA join(589893..590577,603544..603967,605061..605222, FT 607964..608182,610259..>610405) FT /gene="HCN2" FT /product="HCN2 mRNA" FT CDS join(589946..590577,603544..603967,605061..605222, FT 607964..608182,610259..>610405) FT /codon_start=1 FT /gene="HCN2" FT /product="hyperpolarization activated cyclic FT nucleotide-gated potassium channel 2" FT /note="brain cyclic nucleotide gated channel 2 [Homo FT sapiens]" FT /protein_id="AAC33280.2" FT /translation="MDARGGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPP FT GPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDSSCGRPGTPGAASTAKGSPNGECGR FT GEPQCSPAGPEGPARGPKVSFSCRGAASGPAPGPGPAEEAGSEEAGPAGEPRGSQASFM FT QRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPYSDFRFYWDFTMLLFM FT VGNLIIIPVGITFFKDETTAPWIVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDPEK FT IKKKYLRTWFVVDFVSSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRL FT SRLIRYIHQWEEIFHMTYDLASAVMRICNLISMMLLLCHWDGCLQFLVPMLQDFPRNCW FT VSINGMVNHSWSELYSFALFKAMSHMLCIGYGRQAPESMTDIWLTMLSMIVGATCYAMF FT IGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEDS FT ILGELNGPLRE" FT unsure 589956..590030 FT /gene="HCN2" FT /note="Coverage on one strand only" FT repeat_region 590325..590416 FT /rpt_family="GC_rich" FT repeat_region 590873..590993 FT /rpt_family="(GGGA)n" FT repeat_region 592855..592974 FT /rpt_family="MIR" FT repeat_region 593339..593639 FT /rpt_family="AluSx" FT repeat_region 594921..595217 FT /rpt_family="AluJo" FT repeat_region complement(598313..598601) FT /rpt_family="AluJb" FT repeat_region complement(598606..598907) FT /rpt_family="AluY" FT repeat_region complement(599007..599071) FT /rpt_family="MIR" FT repeat_region 599498..599798 FT /rpt_family="AluY" FT repeat_region complement(599848..599897) FT /rpt_family="(CA)n" FT repeat_region complement(599902..600008) FT /rpt_family="FLAM_C" FT repeat_region complement(600171..600339) FT /rpt_family="AluSx" FT repeat_region complement(600340..600644) FT /rpt_family="AluSc" FT repeat_region complement(600645..600779) FT /rpt_family="AluSx" FT repeat_region complement(600806..601032) FT /rpt_family="L1MB5" FT repeat_region 601033..601327 FT /rpt_family="AluSg" FT repeat_region complement(601328..601518) FT /rpt_family="L1MD1" FT repeat_region complement(602010..602205) FT /rpt_family="(GGA)n" FT repeat_region complement(602215..602430) FT /rpt_family="(GGA)n" FT repeat_region complement(606098..606400) FT /rpt_family="AluSx" FT repeat_region 606406..606511 FT /rpt_family="AluJo/FRAM" FT repeat_region 606571..606868 FT /rpt_family="AluSx" FT repeat_region 606890..607189 FT /rpt_family="AluSp" FT repeat_region complement(608377..608397) FT /rpt_family="GC_rich" FT repeat_region 608994..609019 FT /rpt_family="MIR" FT repeat_region 609484..609680 FT /rpt_family="AluSx" FT misc_feature 610937..611087 FT /note="Overlaps bases 1 to 151 of cosmid R33683 FT (LLNLR-299G3, AC004449)" FT repeat_region complement(610942..611222) FT /rpt_family="MLT1C" FT repeat_region complement(611225..611269) FT /rpt_family="LINE2" FT repeat_region complement(611627..611799) FT /rpt_family="L1MB7" FT repeat_region 611864..612157 FT /rpt_family="AluSx" FT repeat_region complement(612394..612428) FT /rpt_family="(CA)n" FT repeat_region complement(612434..612714) FT /rpt_family="AluSx" FT repeat_region complement(612729..612979) FT /rpt_family="AluJb" FT misc_feature complement(613245..613487) FT /note="BLASTX similarity to 2708316 (448..528); match: FT 0.85, score: 1.2e-76; database searched: nr; (AF028737) FT brain cyclic nucleotide gated 1, Bcng-1" FT misc_feature 613248..613488 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT /note="DDS similarity to N72770 yz76f11.r1 Soares multiple FT sclerosis 2NbHMSP Homo sapiens cDNA clone 289005 5' similar FT to PIR:S52072 S52072 DmCNGC protein - fruit fly ; FT (45..286);99% identity." FT misc_feature complement(613368..613488) FT /note="BLASTN similarity to AA843273 (389..509); match: FT 0.99, score: 1.8e-99; database searched: month.na; FT aj16b03.s1 Soares parathyroid tumor NbHPA Homo sapiens cDNA FT clone IMAGE:1390445 3' similar to SW:CNG1_CHICK Q90805 FT CYCLIC" FT misc_feature 613454..613488 FT /note="DDS similarity to AA023393 mh71a11.r1 Soares mouse FT placenta 4NbMP13.5 14.5 Mus musculus cDNA clone 456380 5'; FT (1..33); 79% identity.~" FT repeat_region complement(613499..613582) FT /rpt_family="GC_rich" FT repeat_region complement(613675..613725) FT /rpt_family="GC_rich" FT repeat_region complement(613774..613816) FT /rpt_family="GC_rich" FT misc_feature complement(613851..613877) FT /note="BLASTN similarity to AA843273 (363..389); match: FT 0.88, score: 1.8e-99; database searched: month.na; FT aj16b03.s1 Soares parathyroid tumor NbHPA Homo sapiens cDNA FT clone IMAGE:1390445 3' similar to SW:CNG1_CHICK Q90805 FT CYCLIC" FT misc_feature complement(613851..614024) FT /note="BLASTX similarity to 2708316 (529..586); match: FT 0.94, score: 1.2e-76; database searched: nr; (AF028737) FT brain cyclic nucleotide gated 1, Bcng-1" FT misc_feature 613852..614016 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 99.000~~DDS similarity FT to overlapping ESTs:~N72770 yz76f11.r1 Soares multiple FT sclerosis 2NbHMSP Homo sapiens cDNA clone 289005 5' similar FT to PIR:S52072 S52072 DmCNGC protein - fruit fly ; FT (287..458); 87% identity.~~AA023393 mh71a11.r1 Soares mouse FT placenta 4NbMP13.5 14.5 Mus musculus cDNA clone 456380 5'; FT (34..197);87% identity." FT misc_feature complement(613878..614016) FT /note="DDS similarity to overlapping ESTs:~(2918..3080) FT N59822 yz76f11.s1 Homo sapiens cDNA clone 289005 3' FT (401..226); 87.4% identity.~~~~BLASTN similarity to FT AA843273 (220..363); match: 0.97, score: 1.8e-99; database FT searched: month.na; aj16b03.s1 Soares parathyroid tumor FT NbHPA Homo sapiens cDNA clone IMAGE:1390445 3' similar to FT SW:CNG1_CHICK Q90805 CYCLIC" FT repeat_region 614021..614068 FT /rpt_family="GC_rich" FT repeat_region 615229..615533 FT /rpt_family="AluY" FT misc_feature 615795..616075 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 86.000~~DDS similarity FT to overlapping ESTs:~(4859..5080) N59822 yz76f11.s1 Homo FT sapiens cDNA clone 289005 3'; (225..1); 95% FT identity.~~(4859..4901) AA023393 mh71a11.r1 Soares mouse FT placenta 4NbMP13.5 14.5 Mus musculus cDNA clone 456380 5' FT (198..240); 88% identity.~~(5004..4950) H50134 yo27a07.r1 FT Homo sapiens cDNA clone 179124 5'; (55..1); 100% identity." FT repeat_region complement(615947..616058) FT /rpt_family="(CGG)n" FT repeat_region complement(616081..616208) FT /rpt_family="(CGGG)n" FT repeat_region complement(616200..616322) FT /rpt_family="(CGG)n" FT misc_feature 616330..616403 FT /note="DDS similarity to AA023393|AA023393 mh71a11.r1 FT Soares mouse placenta 4NbMP13.5 14.5 Mus musculus cDNA FT clone 456380 5'; (241..313); 85% identity." FT repeat_region complement(616348..616521) FT /rpt_family="GC_rich" FT repeat_region complement(616614..616725) FT /rpt_family="GC_rich" FT misc_feature complement(616709..616970) FT /note="DDS similarity to H50134 yo27a07.r1 Homo sapiens FT cDNA clone 179124 5'; (318..56); 97% identity." FT repeat_region 616735..616770 FT /rpt_family="MIR" FT misc_feature complement(616753..617159) FT /note="DDS similarity to overlapping ESTs:~(6223..5817) FT N98498 zb86d07.s1 Soares senescent fibroblasts NbHSF Homo FT sapiens cDNA clone 310477 3' similar to gb:X02067 H.sapiens FT mRNA for 7SL RNA pseudogene (HUMAN); (1..418); 93% FT identity.~~(5992..5817) W31064 zb86d07.r1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 310477 5' similar FT to gb:X02067 H.sapiens mRNA for 7SL RNA pseudogene FT (HUMAN);contains Alu repetitive element; (331..156); 96% FT identity.~" FT repeat_region complement(616919..616951) FT /rpt_family="GC_rich" FT misc_feature complement(616959..617099) FT /note="BLASTN similarity to cpg269g2.rt1a (13..153); match: FT 0.92, score: 4.6e-43; database searched: Sanger CpG; bases FT 111 to 264 (SL to QR)" FT misc_feature complement(617229..617326) FT /note="BLASTN similarity to D20435 (51..148); match: 0.98, FT score: 6.4e-49; database searched: est; Human HL60 FT 3'directed MboI cDNA, HUMGS01409, clone pm1662." FT misc_feature complement(617274..617323) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 87.000~~DDS similarity FT to: ~R31115 yh61h07.s1 Homo sapiens cDNA clone 134269 3' FT similar to contains TAR1 repetitive element ; (105..7); 97% FT identity.~(6387..6290) AA019990 ze62c09.r1 Soares retina FT N2b4HR Homo sapiens cDNA clone 363568 5' (98..2); 100% FT identity.~(6387..6332) AA168666 ms32b05.r1 Stratagene mouse FT skin (#937313) Mus musculus cDNA clone 608625 5' similar to FT SW:RPOM_YEAST P13433 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (120..64); 75% identity." FT CDS complement(join(617274..617323,617419..617480, FT 617570..617655,617777..617849,618488..618586, FT 618705..618760,618997..619110,619210..619296, FT 619586..619765,619958..620080,620365..620487, FT 621058..621846,622149..622373,622582..622752, FT 622821..622985,623454..623603,624719..624905, FT 625124..625254,629540..630168,632834..632938, FT 633425..633512)) FT /codon_start=1 FT /gene="POLRMT" FT /product="RPOM_HUMAN" FT /note="DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL PRECURSOR" FT /protein_id="AAC06147.1" FT /translation="MSALCWGRGAAGLKRALRPCGRPGLPGKEGTAGGVCGPRRSSSAS FT PQEQDQDRRKDWGHVELLEVLQARVRQLQAESVSEVVVNRVDVARLPECGSGDGSLQPP FT RKVQMGAKDATPVPCGRWAKILEKDKRTQQMRMQRLKAKLQMPFQSGEFKALTRRLQVE FT PRLLSKQMAGCLEDCTRQAPESPWEEQLARLLQEAPGKLSLDVEQAPSGQHSQAQLSGQ FT QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELV FT YVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLS FT EEDRATVLKAVHKVKPTFSLPPQLPPPVNTSKLLRDVYAKDGRVSYPKLHLPLKTLQCL FT FEKQLHMELASRVCVVSVEKPTLPSKEVKHARKTLKTLRDQWEKALCRALRETKNRLER FT EVYEGRFSLYPFLCLLDEREVVRMLLQVLQALPAQGESFTTLARELSARTFSRHVVQRQ FT RVSGQVQALQNHYRKYLCLLASDAEVPEPCLPRQYWEELGAPEALREQPWPLPVQMELG FT KLLAEMLVQATQMPCSLDKPHRSSRLVPVLYHVYSFRNVQQIGILKPHPAYVQLLEKAA FT EPTLTFEAVDVPMLCPPLPWTSPHSGAFLLSPTKLMRTVEGATQHQELLETCPPTALHG FT ALDALTQLGNCAWRVNGRVLDLVLQLFQAKGCPQLGVPAPPSEAPQPPEAHLPHSAAPA FT RKAELRRELAHCQKVAREMHSLRAEALYRLSLAQHLRDRVFWLPHNMDFRGRTYPCPPH FT FNHLGSDVARALLEFAQGRPLGPHGLDWLKIHLVNLTGLKKREPLRKRLAFAEEVMDDI FT LDSADQPLTGRKWWMGAEEPWQTLACCMEVANAVRASDPAAYVSHLPVHQDGSCNGLQH FT YAALGRDSVGAASVNLEPSDVPQDVYSGVAAQVEVFRRQDAQRGMRVAQVLEGFITRKV FT VKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQEFVWEASHYLVRQVFKSLQEMFSGTR FT AIQHWLTESARLISHMGSVVEWVTPLGVPVIQPYRLDSKVKQIGGGIQSITYTHNGDIS FT RKPNTRKQKNGFPPNFIHSLDSSHMMLTALHCYRKGLTFVSVHDCYWTHAADVSVMNQV FT CREQFVRLHSEPILQDLSRFLVKRFCSEPQKILEASQLKETLQAVPKPGAFDLEQVKRS FT TYFFS" FT misc_feature complement(617419..617480) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to: ~R31115 yh61h07.s1 Homo sapiens cDNA clone FT 134269 3' similar to contains TAR1 repetitive element ; FT (167..106); 100% identity.~AA019990 ze62c09.r1 Soares FT retina N2b4HR Homo ~sapiens cDNA clone 363568 5' (159..99); FT 98% identity.~(6544..6505) AA565330 nk01a02.s1 FT NCI_CGAP_Pr11 Homo sapiens cDNA clone IMAGE:1000682 similar FT to SW:RPOM_NEUCR P38671 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (315..354); 100% FT identity.~AA016522 mg88g05.r1 Soares mouse embryo NbME13.5 FT 14.5 Mus musculus cDNA clone 440120 5' similar to FT SW:RPOM_NEUCR P38671 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (193..147).~~AA168666 ms32b05.r1 FT Stratagene mouse skin (#937313) Mus musculus cDNA clone FT 608625 5' similar to SW:RPOM_YEAST P13433 DNA-DIRECTED RNA FT POLYMERASE MITOCHONDRIAL PRECURSOR ; (202..122); 62% FT identity.~~BLASTN similarity to D20435 (1..54); match: FT 0.98, score: 6.4e-49; database searched: est; Human HL60 FT 3'directed MboI cDNA, HUMGS01409, clone pm1662." FT misc_feature complement(617570..617655) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 90.000~~DDS similarity FT to:~R31115 yh61h07.s1 Homo sapiens cDNA clone 134269 3' FT similar to contains TAR1 repetitive element ; (258..168); FT 93% identity.~AA019990 ze62c09.r1 Soares retina N2b4HR Homo FT ~sapiens cDNA clone 363568 5' (220..160); 98% FT identity.~AA565330 nk01a02.s1 NCI_CGAP_Pr11 Homo sapiens FT cDNA clone IMAGE:1000682 similar to SW:RPOM_NEUCR P38671 FT DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL PRECURSOR ; FT (229..314); 100% identity.~AA016522 mg88g05.r1 Soares mouse FT embryo NbME13.5 14.5 Mus musculus cDNA clone 440120 5' FT similar to SW:RPOM_NEUCR P38671 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (321..194); 69% FT identity.~~AA168666 ms32b05.r1 Stratagene mouse skin FT (#937313) Mus musculus cDNA clone 608625 5' similar to FT SW:RPOM_YEAST P13433 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (300..203); 70% identity." FT misc_feature complement(617777..617849) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 86.000~~DDS similarity FT to overlapping ESTs:~R31115 yh61h07.s1 Homo sapiens cDNA FT clone 134269 3' similar to contains TAR1 repetitive FT element; (335..259); 95% identity.~AA565330 nk01a02.s1 FT NCI_CGAP_Pr11 Homo sapiens cDNA clone IMAGE:1000682 similar FT to SW:RPOM_NEUCR P38671 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (156..228); 100% FT identity.~AA016522 mg88g05.r1 Soares mouse embryo NbME13.5 FT 14.5 Mus musculus cDNA clone 440120 5' similar to FT SW:RPOM_NEUCR P38671 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (394..322); 79% FT identity.~AA168666 ms32b05.r1 Stratagene mouse skin FT (#937313) Mus musculus cDNA clone 608625 5' similar to FT SW:RPOM_YEAST P13433 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (373..301); 79% identity." FT misc_feature complement(618488..618586) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA565330 nk01a02.s1 FT NCI_CGAP_Pr11 Homo sapiens cDNA clone IMAGE:1000682 similar FT to SW:RPOM_NEUCR P38671 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (57..155); 100% FT identity.~(7634..7552) AA016522 mg88g05.r1 Soares mouse FT embryo NbME13.5 14.5 Mus musculus cDNA clone 440120 5' FT similar to SW:RPOM_NEUCR P38671 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (478..395); 90% FT identity.~AA168666 ms32b05.r1 Stratagene mouse skin FT (#937313) Mus musculus cDNA clone 608625 5' similar to FT SW:RPOM_YEAST P13433 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (472..374); 88% FT identity.~~AA316859 EST188520 HCC cell line (metastasis to FT liver in mouse) II Homo sapiens cDNA 5' end; (336..434); FT 99% identity." FT misc_feature complement(618705..618760) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 96.000~~DDS similarity FT to overlapping ESTs:~(7824..7769) AA565330 nk01a02.s1 FT NCI_CGAP_Pr11 Homo sapiens cDNA clone IMAGE:1000682 similar FT to SW:RPOM_NEUCR P38671 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR; (1..56); 100% identity.~~AA168666 FT ms32b05.r1 Stratagene mouse skin (#937313) Mus musculus FT cDNA clone 608625 5' similar to SW:RPOM_YEAST P13433 FT DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL PRECURSOR ; FT (525..474).~~AA316859 EST188520 HCC cell line (metastasis FT to liver in mouse) II Homo sapiens cDNA 5' end; (280..335); FT 100% identity.~" FT misc_feature complement(618997..619110) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 89.000~~DDS similarity FT to overlapping ESTs:~AA168666 ms32b05.r1 Stratagene mouse FT skin (#937313) Mus musculus cDNA clone 608625 5' similar to FT SW:RPOM_YEAST P13433 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (579..526); 78% FT identity.~~AA316859 EST188520 HCC cell line (metastasis to FT liver in mouse) II Homo sapiens cDNA 5' end; (166..279); FT 100% identity.~" FT misc_feature complement(619210..619296) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(8360..8274) AA316859 FT EST188520 HCC cell line (metastasis to liver in mouse) II FT Homo sapiens cDNA 5' end; (79..165); 100% identity.~" FT misc_feature complement(619586..619765) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 97.000~~DDS similarity FT to overlapping ESTs:~(8727..8650) AA316859 EST188520 HCC FT cell line (metastasis to liver in mouse) II Homo sapiens FT cDNA 5' end; (1..78); 100% identity.~~(8829.AA521239 FT aa79b09.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:827129 3' similar to SW:RPOM_NEUCR P38671 FT DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL PRECURSOR ; FT (397.. 549); 89% identity." FT misc_feature complement(619953..620080) FT /gene="POLRMT" FT /note="DDS similarity to overlapping ESTs:~AA521239 FT aa79b09.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:827129 3' similar to SW:RPOM_NEUCR P38671 FT DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL PRECURSOR ; FT (276..398); 87% identity.~~(9144..9030) H03562 yj37h07.r1 FT Homo sapiens cDNA clone 150973 5' similar to SP:RPOM_YEAST FT P13433 DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL ; FT (114..1); 95% identity.~~(9144..9031) AA019991 ze62c09.s1 FT Soares retina N2b4HR Homo sapiens cDNA clone 363568 3' FT similar to SW:RPOM_NEUCR P38671 DNA-DIRECTED RNA POLYMERASE FT MITOCHONDRIAL PRECURSOR ; (355..467); 94% FT identity.~~predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(620365..620487) FT /gene="POLRMT" FT /note="DDS similarity to overlapping ESTs:~(9551..9429) FT AA521239 aa79b09.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:827129 3' similar to SW:RPOM_NEUCR P38671 FT DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL PRECURSOR ; FT (154..275); 97% identity.~~H03562 yj37h07.r1 Homo sapiens FT cDNA clone 150973 5' similar to SP:RPOM_YEAST P13433 FT DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL ; (237..115); 97% FT identity.~~AA019991 ze62c09.s1 Soares retina N2b4HR Homo FT sapiens cDNA clone 363568 3' similar to SW:RPOM_NEUCR FT P38671 DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL PRECURSOR FT ; (233..354); 99% identity.~~predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: good, score: FT 67.000" FT repeat_region 620857..620969 FT /rpt_family="(GGA)n" FT repeat_region complement(620976..621054) FT /rpt_family="GC_rich" FT misc_feature complement(621058..621846) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 85.000" FT misc_feature complement(621058..621290) FT /gene="POLRMT" FT /note="DDS similarity to overlapping ESTs:~(10354..10122) FT AA019991 ze62c09.s1 Soares retina N2b4HR Homo sapiens cDNA FT clone 363568 3' similar to SW:RPOM_NEUCR P38671 FT DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL PRECURSOR FT ;(1..232); 96% identity.~~(10280..10122) AA521239 FT aa79b09.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:827129 3' similar to SW:RPOM_NEUCR P38671 FT DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL PRECURSOR ; FT (1..153); 96% identity.~~(10272..10122) H03562 yj37h07.r1 FT Homo sapiens cDNA clone 150973 5' similar to SP:RPOM_YEAST FT P13433 DNA-DIRECTED RNA POLYMERASE MITOCHONDRIAL ; FT (390..238); 93% identity." FT misc_feature complement(621330..621777) FT /gene="POLRMT" FT /note="DDS similarity to overlapping ESTs:~(10803..10489) FT AA637102 vu03c09.r1 Soares mouse mammary gland NbMMG Mus FT musculus cDNA clone 1179568 5' (202..513); 72% FT identity.~~(10841..10394)A445206 vf63d05.r1 Barstead MPLRB1 FT Mus musculus cDNA clone 848457 5'; Score: 414 Identity: FT 332/448 (74%).~" FT repeat_region complement(621436..621505) FT /rpt_family="GC_rich" FT misc_feature complement(622033..622074) FT /gene="POLRMT" FT /note="DDS similarity to AA041699 mj02e01.r1 Soares mouse FT embryo NbME13.5 14.5 Mus musculus cDNA clone 474936 5' FT (455..492); 49% identity." FT misc_feature complement(622251..622373) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 77.000~~DDS similarity FT to overlapping ESTs:~(11215..11439) AA592040 vk21f07.r1 FT Knowles Solter mouse blastocyst B1 Mus musculus cDNA clone FT 947269 5' (353..133); 72% identity.~~(11431..11213) FT AA041699 mj02e01.r1 Soares mouse embryo NbME13.5 14.5 Mus FT musculus cDNA clone 474936 5' (236..454); 72% identity." FT misc_feature complement(622582..622752) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 99.000~~DDS similarity FT to AA041699 mj02e01.r1 Soares mouse embryo NbME13.5 14.5 FT Mus musculus cDNA clone 474936 5' (160..235); 71% FT identity.~~AA284736 zt20h11.r1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 713733 5' (117..284); 97% FT identity." FT repeat_region complement(622778..622808) FT /rpt_family="GC_rich" FT misc_feature complement(622821..622985) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to: ~(12004..11885) AA284736 zt20h11.r1 Soares FT ovary tumor NbHOT Homo sapiens cDNA clone 713733 5' FT (1..116); 90% identity." FT misc_feature complement(623454..623603) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 623995..624395 FT /rpt_family="L1MB2" FT misc_feature complement(624719..624905) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 92.000" FT misc_feature complement(625124..625254) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region complement(625513..625699) FT /rpt_family="L1" FT repeat_region complement(625701..626000) FT /rpt_family="AluSg" FT repeat_region complement(626004..626145) FT /rpt_family="L1" FT repeat_region complement(626150..626453) FT /rpt_family="AluSx" FT repeat_region complement(626478..626504) FT /rpt_family="AT_rich" FT repeat_region 626505..626682 FT /rpt_family="AluSg" FT repeat_region 626682..626844 FT /rpt_family="AluSg/x" FT repeat_region 626883..626933 FT /rpt_family="(TA)n" FT repeat_region complement(627150..627451) FT /rpt_family="AluY" FT repeat_region complement(627515..627630) FT /rpt_family="MER3" FT repeat_region 627643..627944 FT /rpt_family="AluSx" FT repeat_region 627962..628068 FT /rpt_family="AluSg/x" FT repeat_region 628074..628246 FT /rpt_family="MLT1C" FT repeat_region complement(628476..628584) FT /rpt_family="MER80" FT repeat_region 628723..629018 FT /rpt_family="AluSg" FT repeat_region 629066..629216 FT /rpt_family="L1" FT misc_feature complement(629474..630168) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 84.000~~(19097..19232) FT DDS similarity to T16125 IB3532 Infant brain, Bento Soares FT Homo sapiens cDNA 3'end; (124..258); 93% identity." FT misc_feature 629577..629836 FT /gene="POLRMT" FT /note="DDS similarity to R73297 yj92e08.r1 Homo sapiens FT cDNA clone 156230 5'. Score: 431 Identity: 243/257 (94%)." FT repeat_region 630439..630556 FT /rpt_family="LINE2" FT repeat_region 630876..631169 FT /rpt_family="AluSx" FT repeat_region 631176..631338 FT /rpt_family="FRAM" FT repeat_region 631360..631650 FT /rpt_family="AluSc" FT repeat_region complement(631741..632072) FT /rpt_family="AluSq" FT repeat_region complement(632073..632153) FT /rpt_family="AluSc" FT repeat_region complement(632154..632234) FT /rpt_family="AluSg" FT repeat_region 632525..632546 FT /rpt_family="GC_rich" FT misc_feature complement(632798..632938) FT /gene="POLRMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 83.000~~(22002..21898) FT T16125 IB3532 Infant brain, Bento Soares Homo sapiens cDNA FT 3'end; (19..123); 94% identity." FT repeat_region 633355..633398 FT /rpt_family="GC_rich" FT repeat_region complement(633806..633979) FT /rpt_family="AluJo" FT misc_feature complement(634411..634455) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 67.000" FT repeat_region 634551..634853 FT /rpt_family="AluSx" FT repeat_region 634873..635166 FT /rpt_family="AluJo" FT repeat_region complement(635167..635296) FT /rpt_family="LINE2" FT repeat_region 635714..635992 FT /rpt_family="AluSx" FT repeat_region 636004..636166 FT /rpt_family="FRAM" FT repeat_region 636318..636619 FT /rpt_family="AluSx" FT repeat_region 636699..636998 FT /rpt_family="AluSx" FT repeat_region complement(637054..637471) FT /rpt_family="MLT1D" FT repeat_region complement(637557..637704) FT /rpt_family="AluSg/x" FT repeat_region 637705..637990 FT /rpt_family="L1MB7" FT repeat_region 637991..638288 FT /rpt_family="AluSg" FT repeat_region 638290..638348 FT /rpt_family="L1MB7" FT repeat_region complement(639436..639555) FT /rpt_family="(GA)n" FT repeat_region 639774..640018 FT /rpt_family="GC_rich" FT misc_feature 639926..640139 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 68.000" FT repeat_region complement(640551..640635) FT /rpt_family="MIR" FT repeat_region 640796..640848 FT /rpt_family="GC_rich" FT misc_feature 641178..641268 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 58.000" FT CDS join(641178..641268,643235..643338,643410..643604) FT /codon_start=1 FT /product="R33683_2" FT /note="Hypothetical human protein most similar to FT fibroblast growth factor [Rattus norvegicus]; Putative FT novel human growth factor. 48% identical to (U67918) FT keratinocyte growth factor 2 [Homo sapiens] and (D79215) FT fibroblast growth factor [Rattus norvegicus].~~Identified FT by overlapping BLASTX matches and GRAIL predictions" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC06148.1" FT /translation="MGDPVVTETPTLLGLPEQRRAAVRHVNKGAGILEIRSVHVGVVVI FT KAVSSGFYVAMNRRGRLYGSRLYTVDCRFRERIEENGHNTYASQRWRRRGQPMFLALDR FT RGGPRPGGRTRRYHLSAHFLPVLVS" FT repeat_region 641295..641593 FT /rpt_family="AluY" FT misc_feature 643235..643338 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~BLASTX FT similarity to PID (114..150); match: 0.59, score: 1.4e-31; FT database searched: nr; (D79215) fibroblast growth factor FT [Rattus norvegicus]" FT repeat_region complement(643345..643407) FT /rpt_family="GC_rich" FT misc_feature 643410..643595 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 84.000~~BLASTX FT similarity to PID (156..213); match: 0.56, score: 1.4e-31; FT database searched: nr; (D79215) fibroblast growth factor FT [Rattus norvegicus]" FT repeat_region complement(643528..643562) FT /rpt_family="GC_rich" FT repeat_region 644132..644407 FT /rpt_family="MLT1D" FT repeat_region 645077..645136 FT /rpt_family="MER20" FT repeat_region 645321..645620 FT /rpt_family="AluSg" FT repeat_region complement(646499..646625) FT /rpt_family="MLT1D" FT misc_feature 647522..648277 FT /note="DDS similarity to overlapping ESTs:~(37341..36871) FT AA625796 zu86g05.s1 Soares testis NHT Homo sapiens cDNA FT clone 744920 3' similar to TR:G971275 G971275 FT NEURODEGENERATION ASSOCIATED PROTEIN 1. ; (469..1); 98% FT identity.~~(37341..37068) AA464117 zx86f07.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 810661 5' similar to FT SW:ICP0_HSV11 P08393 TRANS-ACTING TRANSCRIPTIONAL PROTEIN FT ICP0 ; (124..397); 99% identity.~~(36586..37036) N35216 FT yy21a04.s1 Homo sapiens cDNA clone 271854 3'. Score: 814 FT Identity: 435/451 (96%).~~(36591..36903) AA614276 FT np25f12.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1117391; Score: 609 Identity: 310/312 FT (99%).~~(37152..36739) N44879 yy21a04.r1 Homo sapiens cDNA FT clone 271854 5'. Score: 669 Identity: 386/407 FT (94%).~~(37256..36875) AA147251 zl50d06.r1 Soares pregnant FT uterus NbHPU Homo sapiens cDNA clone 505355 5'.~Score: 696 FT Identity: 374/382 (97%).~~(36875..37270) AA427867 FT zw32e10.s1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 771018 3'; Score: 752 Identity: 391/398 FT (98%).~~(36874..37310) AA463982 zx86f07.s1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 810661 3'; Score: 822 FT Identity: 427/437 (97%)." FT repeat_region complement(647841..647863) FT /rpt_family="AT_rich" FT misc_feature 647849..648098 FT /note="BLASTN similarity to cpg46b7.ft1a (1..251); match: FT 0.9, score: 6.6e-77; database searched: CpG; bases 110 to FT 400 (SL to QR)" FT misc_feature complement(648007..648277) FT /note="DDSs similarity to overlapping FT ESTs:~(37341..37071)AA430688 zw32e10.r1 Soares ovary tumor FT NbHOT Homo sapiens cDNA clone 771018 5' similar to FT SW:GOLI_DROME Q06003 GOLIATH PROTEIN; (122..381); 95% FT identity. ~~(37341..37155) AA114267 zm29f06.r1 Stratagene FT pancreas (#937208) Homo sapiens cDNA clone 527075 5' FT similar to SW:GOLI_DROME Q06003 GOLIATH PROTEIN ; FT (163..353); 97% identity.~~(37228..37196) predicted exon, FT program: grail2exons_human_1.3, frame: 2, quality: good, FT score: 72.000~~(37176..37343) BLASTN similarity to AA819792 FT (186..353); match: 0.82, score: 3.2e-56; database searched: FT month.na; UI-R-A0-aq-f-02-0-UI.s1 UI-R-A0 Rattus norvegicus FT cDNA clone UI-R-A0-aq-f-02-0-UI 3'" FT CDS complement(join(648128..648277,648372..648487, FT 648882..>648928)) FT /codon_start=2 FT /product="R33683_3" FT /note="Hypothetical human protein (partial ORF); Most FT similar to predicted ORFs from Arabidopsis thaliana FT (gi|2642154 from AC003000; gi|2623297 from AC002409) and FT mouse Praja1 (U06944), which is similar to rat FT neurodegeneration associated protein 1 and to the FT Drosophila Goliath protein.~~Amino terminus of protein FT likely encoded in cosmid R33586 (AC004156)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC06149.1" FT /translation="KIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHD FT GCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTGVSFSSSSSSSSSSSPSNENATSNS" FT repeat_region 648322..648365 FT /rpt_family="GC_rich" FT misc_feature complement(648372..648503) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA625796 zu86g05.s1 Soares FT testis NHT Homo sapiens cDNA clone 744920 3' similar to FT TR:G971275 G971275 NEURODEGENERATION ASSOCIATED PROTEIN 1. FT ; (529..470); 92% identity.~~AA464117 zx86f07.r1 Soares FT ovary tumor NbHOT Homo sapiens cDNA clone 810661 5' similar FT to SW:ICP0_HSV11 P08393 TRANS-ACTING TRANSCRIPTIONAL FT PROTEIN ICP0 ; (1..123); 95% identity.~~(37551..37436) FT AA114267 zm29f06.r1 Stratagene pancreas (#937208) Homo FT sapiens cDNA clone 527075 5' similar to SW:GOLI_DROME FT Q06003 GOLIATH PROTEIN ; (48..162); 94% FT identity.~~(37558..37436) AA430688 zw32e10.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 771018 5' similar to FT SW:GOLI_DROME Q06003 GOLIATH PROTEIN ; (1..121); 96% FT identity." FT repeat_region 648687..648872 FT /rpt_family="AluSq" FT misc_feature complement(648882..648975) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 72.000~~DDS similarity to FT ~(37992..37946) AA114267 zm29f06.r1 Stratagene pancreas FT (#937208) Homo sapiens cDNA clone 527075 5' similar to FT SW:GOLI_DROME Q06003 GOLIATH PROTEIN ; 91..47); 100% FT identity." FT misc_feature complement(649679..649748) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 72.000" FT misc_feature complement(650234..650403) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(650419..650589) FT /rpt_family="AluJ" FT repeat_region complement(650590..650891) FT /rpt_family="AluSq" FT repeat_region complement(650910..651027) FT /rpt_family="AluJ" FT misc_feature complement(651038..651218) FT /note="DDS similarity to AA369582 EST81036 Placenta II Homo FT sapiens cDNA 5' end. Score: 321 Identity: 172/180 (95%)." FT misc_feature complement(651611..651855) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(7272..7094) AA111638 FT mo35f09.r1 Life Tech mouse embryo 13 5dpc 10666014 Mus FT musculus cDNA clone 555593 5' end (214..392); 85% FT identity.~~(7272..7072) AA111654 mo35h09.r1 Life Tech mouse FT embryo 13 5dpc 10666014 Mus musculus cDNA clone 555617 5' FT end; (213..414); 86% identity.~~(7272..7162) AA429691 FT zw75c05.r1 Soares testis NHT Homo sapiens cDNA clone 782024 FT 5' (108..1); 92% identity." FT repeat_region complement(651636..651688) FT /rpt_family="GC_rich" FT misc_feature complement(652233..652296) FT /note="DDS similarity to overlapping ESTs:~AA111638 FT mo35f09.r1 Life Tech mouse embryo 13 5dpc 10666014 Mus FT musculus cDNA clone 555593 5' end; (150..213); 83% FT identity.~~AA111654 mo35h09.r1 Life Tech mouse embryo 13 FT 5dpc 10666014 Mus musculus cDNA clone 555617 5' end FT (149..212); 80% identity.~~AA429691 zw75c05.r1 Soares FT testis NHT Homo sapiens cDNA clone 782024 5' (172..107); FT 88% identity. (ACTUALLY MOUSE cDNA??)" FT misc_feature complement(652826..652884) FT /note="DDS similarity to overlapping ESTs:~~AA111638 FT mo35f09.r1 Life Tech mouse embryo 13 5dpc 10666014 Mus FT musculus cDNA clone 555593 5' end; (91..149); 86% FT identity.~~AA111654 mo35h09.r1 Life Tech mouse embryo 13 FT 5dpc 10666014 Mus musculus cDNA clone 555617 5' end; FT (90..148); 88% identity.~~AA429691 zw75c05.r1 Soares testis FT NHT Homo sapiens cDNA clone 782024 5' (232..173); 95% FT identity." FT repeat_region 653688..653830 FT /rpt_family="MSTB" FT repeat_region 654365..654662 FT /rpt_family="AluSx" FT repeat_region 654685..654980 FT /rpt_family="AluSx" FT repeat_region 654995..655021 FT /rpt_family="(GAAA)n" FT repeat_region 655028..655347 FT /rpt_family="AluJb" FT repeat_region 655377..655499 FT /rpt_family="AluY" FT repeat_region 655652..656184 FT /rpt_family="L1MB7" FT repeat_region 656221..656350 FT /rpt_family="AluSc" FT repeat_region 656372..656664 FT /rpt_family="AluSx" FT repeat_region complement(659767..660064) FT /rpt_family="AluSx" FT repeat_region complement(660237..660273) FT /rpt_family="MIR" FT repeat_region complement(660640..660838) FT /rpt_family="AluJb" FT repeat_region 662038..662169 FT /rpt_family="FLAM_C" FT repeat_region 662170..662253 FT /rpt_family="MER5A" FT repeat_region 662441..662472 FT /rpt_family="GC_rich" FT repeat_region complement(662612..662654) FT /rpt_family="GC_rich" FT repeat_region 662971..663059 FT /rpt_family="GC_rich" FT misc_feature complement(663047..663138) FT /note="DDS similarity to overlapping ESTs:~AA111638 FT mo35f09.r1 Life Tech mouse embryo 13 5dpc 10666014 Mus FT musculus cDNA clone 555593 5' end; (1..90); 89% FT identity.~~AA111654 mo35h09.r1 Life Tech mouse embryo 13 FT 5dpc 10666014 Mus musculus cDNA clone 555617 5' (1..89); FT 88% identity." FT repeat_region complement(663104..663210) FT /rpt_family="(CGG)n" FT repeat_region 663238..663268 FT /rpt_family="GC_rich" FT repeat_region 663328..663385 FT /rpt_family="GC_rich" FT repeat_region complement(663412..663442) FT /rpt_family="GC_rich" FT misc_feature 663591..663707 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 54.000" FT repeat_region complement(664041..664342) FT /rpt_family="AluSg" FT repeat_region complement(664641..664940) FT /rpt_family="AluSx" FT repeat_region 665189..665231 FT /rpt_family="MIR" FT repeat_region complement(665460..665761) FT /rpt_family="AluSx" FT repeat_region 666049..666111 FT /rpt_family="FLAM" FT repeat_region 666120..666398 FT /rpt_family="AluJb" FT repeat_region complement(666415..666698) FT /rpt_family="AluSx" FT repeat_region complement(666699..666842) FT /rpt_family="AluJo" FT repeat_region complement(667622..667720) FT /rpt_family="MIR" FT repeat_region 667942..668073 FT /rpt_family="AluSx" FT repeat_region 668090..668386 FT /rpt_family="AluSp" FT repeat_region 668388..668556 FT /rpt_family="AluSx" FT repeat_region 668599..669600 FT /rpt_family="MER11A" FT repeat_region complement(669613..669633) FT /rpt_family="AT_rich" FT repeat_region complement(669634..669932) FT /rpt_family="AluY" FT repeat_region complement(669933..670233) FT /rpt_family="AluSx" FT repeat_region complement(670236..670529) FT /rpt_family="AluSx" FT repeat_region 670630..670670 FT /rpt_family="MLT2D" FT misc_feature complement(670636..670694) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 61.000" FT repeat_region 671213..671507 FT /rpt_family="AluSg" FT repeat_region complement(671533..671594) FT /rpt_family="Alu" FT repeat_region 671962..672263 FT /rpt_family="AluSq" FT repeat_region complement(672315..672366) FT /rpt_family="MLT1D" FT repeat_region 672369..672634 FT /rpt_family="AluSx" FT repeat_region 672636..672933 FT /rpt_family="AluSx" FT repeat_region complement(672934..673094) FT /rpt_family="MLT1D" FT repeat_region complement(673148..673447) FT /rpt_family="AluSx" FT repeat_region complement(673456..673577) FT /rpt_family="AluSq/x" FT repeat_region complement(673579..673620) FT /rpt_family="Alu" FT repeat_region 675166..675319 FT /rpt_family="LINE2" FT repeat_region 675676..675713 FT /rpt_family="(CA)n" FT repeat_region complement(676224..676349) FT /rpt_family="(CGGG)n" FT misc_feature 676502..676526 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 72.000" FT repeat_region 676535..676647 FT /rpt_family="(CGG)n" FT repeat_region complement(676776..676892) FT /rpt_family="MIR" FT misc_feature 677792..677977 FT /note="DDS similarity to overlapping ESTs:~(33208..33394) FT W18317 mb69f09.r1 Soares mouse p3NMF19.5 Mus musculus cDNA FT clone 334697 5' similar to PIR:A53502 A53502 follistatin, FT XFS=activin antagonist - African clawed frog ; (102..288); FT 85% identity.~~(33209..33394) AA015105 mh14c06.r1 Soares FT mouse placenta 4NbMP13.5 14.5 Mus musculus cDNA clone FT 442474 5' similar to PIR:S55369 S55369 follistatin - FT chicken ; (101..286); 84% identity.~~(33209..33394) FT AA020306 mh51g09.r1 Soares mouse placenta 4NbMP13.5 14.5 FT Mus musculus cDNA clone 446080 5' similar to PIR:B40064 FT B40064 follistatin short form precursor - pig ; (122..307); FT 85% identity.~~(33229..33394) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 90.000" FT repeat_region complement(678509..678810) FT /rpt_family="AluSx" FT repeat_region 679561..679586 FT /rpt_family="MIR" FT repeat_region 680002..680257 FT /rpt_family="GC_rich" FT misc_feature 680274..680489 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 96.000~~DDS similarity FT to overlapping ESTs:~(35691..35745) W18317 mb69f09.r1 FT Soares mouse p3NMF19.5 Mus musculus cDNA clone 334697 5' FT similar to PIR:A53502 A53502 follistatin, XFS=activin FT antagonist - African clawed frog ; (289..343); 95% FT identity.~~(35691..35783) AA015105 mh14c06.r1 Soares mouse FT placenta 4NbMP13.5 14.5 Mus musculus cDNA clone 442474 5' FT similar to PIR:S55369 S55369 follistatin - chicken ; FT (287..378); 87% identity.~~(35691..35844)AA020306 FT mh51g09.r1 Soares mouse placenta 4NbMP13.5 14.5 Mus FT musculus cDNA clone 446080 5' similar to PIR:B40064 B40064 FT follistatin short form precursor - pig ; (308..461); 86% FT identity." FT misc_feature 681303..681560 FT /note="DDS similarity to overlapping ESTs:~(36720..37053) FT AA408816 EST03298 Mouse 7.5 dpc embryo ectoplacental cone FT cDNA library Mus musculus cDNA clone C0033D06 5' (1..341); FT 73% identity.~~(36729..36987) H51168 yo32f08.r1 Homo FT sapiens cDNA clone 179655 5' similar to SP:FSA_XENLA P31515 FT FOLLISTATIN ;. Score: 367 Identity: 235/266 FT (88%).~~(36842..36977) AA552990 nk83d12.s1 NCI_CGAP_Sch1 FT Homo sapiens cDNA clone IMAGE:1020119 similar to SW:FSA FT _RAT P21674 FOLLISTATIN PRECURSOR ; (535..397); 83% FT identity.~~(36859..37115) BLASTN similarity to D31566 FT (24..189); match: 0.97, score: 2.5e-45; database searched: FT est; Human fetal-lung cDNA 5'-end sequence." FT misc_feature 681452..681560 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 80.000" FT misc_feature 681650..682047 FT /note="DDS similarity to overlapping ESTs:~(37067..37464) FT AA552990 nk83d12.s1 NCI_CGAP_Sch1 Homo sapiens cDNA clone FT IMAGE:1020119 similar to SW:FSA~_RAT P21674 FOLLISTATIN FT PRECURSOR ; (396..1); 97% identity.~~(37087..37247) FT AA408816 EST03298 Mouse 7.5 dpc embryo ectoplacental cone FT cDNA library Mus musculus cDNA clone C0033D06 5' FT (342..498); 65% identity." FT misc_feature 682351..683391 FT /note="DDS similarity to overlapping ESTs:~(37768..38147) FT R74502 yl01a11.r1 Homo sapiens cDNA clone 156956 5' similar FT to contains MER22 repetitive element ;. Score: 740 FT Identity: 375/380 (98%).~~(37791..38193) 42037 yw94b01.r1 FT Homo sapiens cDNA clone 259849 5' similar to contains FT element MER22 repetitive element ;. Score: 748 Identity: FT 395/405 (97%).~~(37815..38381) AA421552 zu07h09.r1 Soares FT testis NHT Homo sapiens cDNA clone 731201 5'. Score: 1022 FT Identity: 552/559 (98%).~~(37862..38408) N75101 yz29c07.r1 FT Soares multiple sclerosis 2NbHMSP Homo sapiens cDNA clone FT 284460 5'.~Score: 913 Identity: 513/544 FT (94%).~~(38315..38728) AA227791 zr56b11.r1 Soares NhHMPu S1 FT Homo sapiens cDNA clone 667389 5'. Score: 798 Identity: FT 411/414 (99%).~~(38808..38400) AA470722 ne13e03.s1 FT NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:881116. Score: FT 805 Identity: 407/408 (99%)." FT repeat_region 683773..684074 FT /rpt_family="AluJb" FT repeat_region 684085..684193 FT /rpt_family="AluSg" FT repeat_region 684227..684445 FT /rpt_family="AluSg" FT repeat_region 684473..684765 FT /rpt_family="AluSc" FT repeat_region 684768..685067 FT /rpt_family="AluY" FT repeat_region 685069..685149 FT /rpt_family="(TAAAA)n" FT misc_feature complement(685519..685797) FT /note="DDS similarity to D19687|HUMGS00642 Human HL60 FT 3'directed MboI cDNA, HUMGS00642, clone mm2740.~Score: 533 FT Identity: 274/278 (98%)." FT misc_feature complement(685772..685922) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 86.000" FT misc_feature complement(685773..685919) FT /note="BLASTX similarity to PID (2..50); match: 0.42, FT score: 3.9e-09; database searched: nr; (X13218) serine FT protease (AA 187 - 237) [Mus musculus]~~BLASTX similarity FT to P49862 (204..251); match: 0.54, score: 1.2e-09; database FT searched: nr; STRATUM CORNEUM CHYMOTRYPTIC ENZYME PRECURSOR FT (SCCE) >pir||A53968 serine proteinase SCCE precursor - FT human >gi|532504" FT repeat_region 685971..686099 FT /rpt_family="LINE2" FT repeat_region complement(704606..704687) FT /rpt_family="LINE2" FT repeat_region complement(704791..704963) FT /rpt_family="AluJo" FT repeat_region 704980..705271 FT /rpt_family="AluY" FT repeat_region 705679..705873 FT /rpt_family="AluY" FT repeat_region complement(705874..705995) FT /rpt_family="AluJo" FT repeat_region complement(706004..706172) FT /rpt_family="AluJb" FT repeat_region complement(706174..706475) FT /rpt_family="AluSp" FT repeat_region complement(706477..706585) FT /rpt_family="AluJb" FT repeat_region complement(706671..706897) FT /rpt_family="AluSg/x" FT repeat_region complement(707041..707147) FT /rpt_family="AluSg" FT repeat_region complement(707148..707232) FT /rpt_family="AluSc" FT repeat_region 707244..707317 FT /rpt_family="LINE2" FT repeat_region complement(707379..707451) FT /rpt_family="MER58A" FT repeat_region complement(707462..707683) FT /rpt_family="MER58A" FT repeat_region complement(707687..707853) FT /rpt_family="MIR" FT misc_feature 708481..708615 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 57.000" FT repeat_region 708775..708898 FT /rpt_family="(CGGG)n" FT repeat_region complement(708999..709113) FT /rpt_family="(CGGG)n" FT exon 709002..709151 FT /gene="PALM" FT /standard_name="Homo sapiens PALM gene" FT /number=1 FT CDS join(709147..709151,726138..726189,727008..727088, FT 727564..727694,731095..>731245) FT /codon_start=1 FT /gene="PALM" FT /product="paralemmin, partial CDS" FT /note="plasma membrane-associated protein" FT /protein_id="AAC62429.1" FT /translation="MEVLAAETTSQQERLQAIAEKRKRQAEIENKRRQLEDERRQLQHL FT KSKALRERWLLEGTPSSASEGDEDLRRQMQDDEQKTRLLEDSVSRLEKEIEVLERGDSA FT PATAKENAAAPSPVRAPAPSPAKEERKTEVVMNSQQ" FT repeat_region complement(709167..709464) FT /rpt_family="GC_rich" FT repeat_region complement(711818..711897) FT /rpt_family="FLAM_A" FT repeat_region complement(712025..712321) FT /rpt_family="AluSq" FT repeat_region complement(712391..712680) FT /rpt_family="AluY" FT repeat_region complement(712681..712975) FT /rpt_family="AluSx" FT repeat_region complement(713006..713061) FT /rpt_family="MIR" FT repeat_region complement(713579..713881) FT /rpt_family="AluSx" FT repeat_region complement(713903..714203) FT /rpt_family="AluY" FT repeat_region complement(714204..714339) FT /rpt_family="AluSq/x" FT repeat_region complement(714357..714657) FT /rpt_family="AluY" FT repeat_region complement(714658..714956) FT /rpt_family="AluJo" FT repeat_region 714982..715282 FT /rpt_family="AluSq" FT repeat_region 716130..716429 FT /rpt_family="AluSx" FT repeat_region complement(716846..716932) FT /rpt_family="L1MB8" FT repeat_region complement(716937..717226) FT /rpt_family="AluSc" FT repeat_region complement(717227..717572) FT /rpt_family="L1MB7" FT repeat_region complement(717821..717905) FT /rpt_family="LINE2" FT repeat_region 717916..718201 FT /rpt_family="AluSx" FT repeat_region complement(718259..718384) FT /rpt_family="LINE2" FT repeat_region 719232..719276 FT /rpt_family="MIR" FT repeat_region 719814..719846 FT /rpt_family="MIR" FT repeat_region complement(720362..720657) FT /rpt_family="GC_rich" FT repeat_region complement(721265..721565) FT /rpt_family="AluSx" FT repeat_region complement(721569..721594) FT /rpt_family="AT_rich" FT repeat_region complement(721596..721897) FT /rpt_family="AluSp" FT repeat_region complement(721917..722217) FT /rpt_family="AluY" FT repeat_region complement(722223..722528) FT /rpt_family="AluJo" FT repeat_region complement(723592..723895) FT /rpt_family="AluSq" FT repeat_region complement(724322..724620) FT /rpt_family="AluSx" FT repeat_region complement(724622..724909) FT /rpt_family="AluJb" FT repeat_region complement(724918..725185) FT /rpt_family="AluSx" FT repeat_region complement(725190..725240) FT /rpt_family="LINE2" FT repeat_region 725277..725573 FT /rpt_family="AluSx" FT repeat_region complement(725987..726078) FT /rpt_family="MIR" FT exon 726138..726189 FT /gene="PALM" FT /standard_name="Homo sapiens PALM gene" FT /number=2 FT repeat_region complement(726587..726802) FT /rpt_family="AluSq" FT repeat_region complement(726812..726866) FT /rpt_family="Alu" FT exon 727008..727088 FT /gene="PALM" FT /standard_name="Homo sapiens PALM gene" FT /number=3 FT exon 727564..727694 FT /gene="PALM" FT /standard_name="Homo sapiens PALM gene" FT /number=4 FT mRNA join(727564..727694,731095..>731245) FT /gene="PALM" FT /product="Human mRNA for KIAA0270 gene, partial cds" FT repeat_region 728526..728721 FT /rpt_family="AluSx" FT repeat_region 728722..729021 FT /rpt_family="AluY" FT repeat_region 729043..729334 FT /rpt_family="AluSx" FT repeat_region 729391..729436 FT /rpt_family="MIR" FT repeat_region complement(729464..729761) FT /rpt_family="AluSx" FT repeat_region 730582..730657 FT /rpt_family="MIR" FT repeat_region 730718..731011 FT /rpt_family="AluSp" FT exon 731095..731245 FT /gene="PALM" FT /standard_name="Homo sapiens PALM gene" FT /number=5 FT repeat_region 731326..731483 FT /rpt_family="MIR" FT repeat_region complement(731673..731962) FT /rpt_family="AluSq" FT repeat_region complement(731971..732188) FT /rpt_family="AluJb" FT repeat_region complement(732267..732336) FT /rpt_family="MIR" FT repeat_region 732413..732648 FT /rpt_family="AluSq" FT misc_feature 771536..772183 FT /note="NOTE: Shatter libraries failed to verify FT dinucleotide repeat region 6262-6909. Unsure number of FT repeat copies 6262-6909. Forced join 6373." FT repeat_region 776921..777223 FT /rpt_family="AluSg" FT repeat_region 777232..777529 FT /rpt_family="AluY" FT repeat_region complement(777534..777587) FT /rpt_family="(TA)n" FT repeat_region complement(777588..777883) FT /rpt_family="AluSq" FT repeat_region complement(777924..778031) FT /rpt_family="L1MC/D" FT repeat_region 778033..778333 FT /rpt_family="AluJo" FT repeat_region complement(778334..778625) FT /rpt_family="AluSx" FT repeat_region 778626..778657 FT /rpt_family="AT_rich" FT repeat_region 778660..778941 FT /rpt_family="AluSx" FT repeat_region 779630..779735 FT /rpt_family="L1MB8" FT repeat_region 779736..780033 FT /rpt_family="AluY" FT repeat_region complement(780048..780254) FT /rpt_family="L1MB6" FT repeat_region complement(780295..780598) FT /rpt_family="AluY" FT repeat_region complement(780604..780648) FT /rpt_family="Alu" FT repeat_region complement(780651..780936) FT /rpt_family="AluSx" FT repeat_region 781312..781456 FT /rpt_family="AluSq/x" FT repeat_region 781457..781763 FT /rpt_family="AluY" FT repeat_region 781768..781918 FT /rpt_family="AluSc" FT repeat_region complement(783537..783563) FT /rpt_family="(GGAA)n" FT repeat_region complement(783568..783707) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(783709..784009) FT /rpt_family="AluSg" FT repeat_region complement(784015..784185) FT /rpt_family="FRAM" FT repeat_region 784212..784477 FT /rpt_family="AluSx" FT repeat_region complement(784484..784596) FT /rpt_family="AluJb" FT misc_feature 784815..784961 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 79.000" FT repeat_region 784990..785251 FT /rpt_family="AluSp" FT repeat_region complement(785335..785373) FT /rpt_family="(TAA)n" FT repeat_region complement(785374..785608) FT /rpt_family="AluSg/x" FT repeat_region 785781..786079 FT /rpt_family="AluSg" FT repeat_region 786166..786466 FT /rpt_family="AluY" FT repeat_region 786646..786938 FT /rpt_family="AluSg" FT repeat_region complement(787053..787307) FT /rpt_family="AluSx" FT repeat_region complement(787310..787359) FT /rpt_family="POLY_A" FT repeat_region complement(787363..787641) FT /rpt_family="AluJo" FT misc_feature complement(787834..787927) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 64.000" FT repeat_region complement(788075..788374) FT /rpt_family="AluY" FT repeat_region complement(788379..788685) FT /rpt_family="AluSx" FT repeat_region complement(789097..789512) FT /rpt_family="MLT1C" FT repeat_region complement(789848..790137) FT /rpt_family="AluJb" FT repeat_region complement(790157..790456) FT /rpt_family="AluSx" FT repeat_region complement(790468..790724) FT /rpt_family="AluJo" FT repeat_region 790731..791028 FT /rpt_family="AluSq" FT repeat_region complement(791029..791323) FT /rpt_family="L1MB8" FT repeat_region complement(791376..791630) FT /rpt_family="AluSx" FT repeat_region 792226..792531 FT /rpt_family="AluJb" FT repeat_region 792897..793019 FT /rpt_family="AluSx" FT repeat_region 793020..793335 FT /rpt_family="AluSc" FT repeat_region 793355..793541 FT /rpt_family="AluSx" FT repeat_region 794188..794328 FT /rpt_family="MLT1D" FT repeat_region complement(794356..794637) FT /rpt_family="AluSg" FT repeat_region complement(794641..794942) FT /rpt_family="AluSp" FT repeat_region 794953..794975 FT /rpt_family="AT_rich" FT repeat_region complement(794985..795058) FT /rpt_family="LINE2" FT misc_feature 797036..797180 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 54.000" FT mRNA join(797452..797505,799413..799443,803561..803636, FT 804036..804208,804292..804438,804532..804702, FT 804829..804939,805013..805187,806408..806556, FT 807869..807902,808360..808452,808546..808762, FT 810543..810620,810694..812312) FT /gene="PTB" FT /product="H.sapiens PTB-1 gene for polypirimidine tract FT binding protein" FT CDS join(797498..797505,799413..799443,803561..803636, FT 804036..804208,804292..804438,804532..804702, FT 804829..804939,805013..805187,806408..806556, FT 807869..807902,808360..808452,808546..808762, FT 810543..810620,810694..810826) FT /codon_start=1 FT /gene="PTB" FT /product="PTB_HUMAN" FT /note="POLYPYRIMIDINE TRACT-BINDING PROTEIN; HETEROGENEOUS FT NUCLEA; HNRNP I; 57 KD RNA-BINDING PROTEIN PPTB-1" FT /protein_id="AAC99798.1" FT /translation="MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSK FT KFKGDSRSAGVPSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTE FT EAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLA FT LAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQF FT QALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLP FT SGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNSVLL FT VSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKL FT HGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHL FT SNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLG FT ENHHLRVSFSKSTI" FT repeat_region complement(797516..797600) FT /rpt_family="(CGG)n" FT repeat_region 797704..797792 FT /rpt_family="GC_rich" FT repeat_region complement(797927..798128) FT /rpt_family="GC_rich" FT repeat_region complement(798181..798227) FT /rpt_family="GC_rich" FT repeat_region complement(799928..800232) FT /rpt_family="AluSx" FT repeat_region complement(804445..804508) FT /rpt_family="GC_rich" FT repeat_region complement(804946..804986) FT /rpt_family="GC_rich" FT repeat_region complement(805390..805412) FT /rpt_family="GC_rich" FT misc_feature complement(805598..806026) FT /note="BLASTN similarity to AI348067 (1..429); match: 0.96, FT score: 4.9e-159; database searched: month.na; qp56d11.x1 FT NCI_CGAP_Co8 Homo sapiens cDNA clone IMAGE:1927029 3', mRNA FT sequence [Homo sapiens]" FT repeat_region 805985..806047 FT /rpt_family="GC_rich" FT repeat_region complement(807525..807579) FT /rpt_family="POLY_A" FT repeat_region complement(808459..808499) FT /rpt_family="GC_rich" FT misc_feature complement(808646..808763) FT /note="BLASTN similarity to AI338172 (387..504); match: FT 0.97, score: 2.5e-36; database searched: month.na; FT qt48e09.x1 Soares_fetal_lung_NbHL19W Homo sapiens cDNA FT clone IMAGE:1951240 3' similar to gb:X60648_rna1 FT POLYPYRIMIDINE" FT repeat_region complement(808881..809006) FT /rpt_family="MER46" FT repeat_region complement(809007..809305) FT /rpt_family="AluSg" FT repeat_region complement(809322..809619) FT /rpt_family="AluY" FT repeat_region 809624..809906 FT /rpt_family="AluJo" FT repeat_region 810025..810316 FT /rpt_family="AluSx" FT misc_feature 811450..812221 FT /gene="PTB" FT /note="BLASTN similarity to ESTs: T39568, D31234, T29463, FT D19716" FT repeat_region complement(812015..812036) FT /rpt_family="AT_rich" FT repeat_region 812351..812427 FT /rpt_family="GC_rich" FT repeat_region complement(812514..812568) FT /rpt_family="(CGGG)n" FT misc_feature complement(812570..814093) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 93.000" FT repeat_region 812614..812739 FT /rpt_family="GC_rich" FT repeat_region 812807..812940 FT /rpt_family="GC_rich" FT repeat_region complement(813343..813410) FT /rpt_family="(GGA)n" FT repeat_region 813712..813749 FT /rpt_family="GC_rich" FT misc_feature complement(814423..814607) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(814692..814749) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 54.000" FT misc_feature complement(814886..815081) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(815199..815327) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 98.000" FT repeat_region complement(815252..815281) FT /rpt_family="GC_rich" FT misc_feature complement(815666..815841) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 98.000" FT repeat_region complement(815902..816022) FT /rpt_family="(TGGA)n" FT repeat_region complement(816044..816239) FT /rpt_family="(TGGA)n" FT repeat_region complement(816249..816386) FT /rpt_family="(TGAA)n" FT repeat_region complement(816398..816522) FT /rpt_family="(TGGA)n" FT repeat_region complement(816547..816672) FT /rpt_family="(TGAA)n" FT repeat_region complement(816679..816798) FT /rpt_family="(TGGA)n" FT repeat_region complement(816809..816997) FT /rpt_family="(TGGA)n" FT repeat_region complement(816999..817069) FT /rpt_family="(TGGA)n" FT repeat_region complement(817074..817277) FT /rpt_family="AluJb" FT repeat_region complement(817302..817378) FT /rpt_family="AluSg/x" FT misc_feature 871755..871965 FT /note="NOTE: 24788-24998 unresolved dinucleotide repeat. FT Unsure number of repeat copies 24788-24998." FT misc_feature 877821..884730 FT /note="NOTE: Unresolved Tandem Repeat 30854-37763. Unsure FT Number of Repeat Copies 30854-37763. Single Transposon FT Hopped Subclone 31383-31750." FT repeat_region 912052..912176 FT /rpt_family="POLY_G" FT repeat_region 912241..912362 FT /rpt_family="POLY_G" FT repeat_region 912957..913039 FT /rpt_family="(GGGA)n" FT repeat_region complement(913046..913187) FT /rpt_family="(CGG)n" FT repeat_region complement(913222..913298) FT /rpt_family="GC_rich" FT repeat_region 913864..913987 FT /rpt_family="AluJb" FT repeat_region 913989..914288 FT /rpt_family="AluY" FT repeat_region 914305..914602 FT /rpt_family="AluSx" FT repeat_region 914611..914909 FT /rpt_family="AluY" FT repeat_region 914911..914958 FT /rpt_family="(GAAAA)n" FT repeat_region complement(915264..915558) FT /rpt_family="AluSx" FT repeat_region 915747..915871 FT /rpt_family="FLAM_C" FT repeat_region 915878..916026 FT /rpt_family="L1PA4" FT repeat_region 916027..916107 FT /rpt_family="(TAAAA)n" FT repeat_region 916112..916409 FT /rpt_family="AluSq" FT repeat_region 916410..916705 FT /rpt_family="AluY" FT repeat_region complement(917409..917462) FT /rpt_family="GC_rich" FT misc_feature 917458..917746 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 71.000" FT repeat_region complement(917934..917958) FT /rpt_family="GC_rich" FT repeat_region 918051..918106 FT /rpt_family="MER58A" FT repeat_region complement(918203..918271) FT /rpt_family="MIR" FT misc_feature 918544..918668 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 83.000" FT repeat_region 918829..918946 FT /rpt_family="(GGA)n" FT misc_feature 919490..919625 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 86.000" FT misc_feature 919874..920106 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 72.000" FT repeat_region 920061..920092 FT /rpt_family="GC_rich" FT misc_feature 920290..920559 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 79.000" FT repeat_region complement(920553..920625) FT /rpt_family="(CGG)n" FT repeat_region complement(921049..921348) FT /rpt_family="AluSx" FT repeat_region 921375..921588 FT /rpt_family="L1PB2" FT repeat_region complement(921589..921770) FT /rpt_family="AluY" FT repeat_region complement(921804..921905) FT /rpt_family="GC_rich" FT repeat_region complement(922264..922557) FT /rpt_family="AluSq" FT repeat_region complement(922560..922850) FT /rpt_family="AluJo" FT repeat_region complement(922861..922982) FT /rpt_family="AluJo" FT repeat_region complement(922995..923298) FT /rpt_family="AluSx" FT repeat_region complement(924000..924051) FT /rpt_family="MIR" FT repeat_region complement(924391..924691) FT /rpt_family="AluSx" FT repeat_region 925015..925078 FT /rpt_family="MIR" FT repeat_region 925604..925640 FT /rpt_family="GC_rich" FT repeat_region complement(925688..925714) FT /rpt_family="GC_rich" FT repeat_region complement(925879..925905) FT /rpt_family="GC_rich" FT repeat_region 925963..926177 FT /rpt_family="GC_rich" FT repeat_region 926646..926708 FT /rpt_family="GC_rich" FT repeat_region 926819..926840 FT /rpt_family="GC_rich" FT repeat_region 928576..928611 FT /rpt_family="MIR" FT misc_feature 929037..929698 FT /note="BLASTN similarity to AF039844 (1..662); match: 1, FT score: 7.2e-267; database searched: nt; Homo sapiens dead FT ringer like 1 protein (DRIL1) gene, exon 1, complete FT sequence" FT mRNA 929329..>932742 FT /product="Homo sapiens DNA binding protein homolog (DRIL1) FT mRNA" FT repeat_region complement(929360..929467) FT /rpt_family="(CGG)n" FT repeat_region 929482..929512 FT /rpt_family="(TGG)n" FT gene 929529..>932742 FT /gene="DRIL1" FT /note="dead ringer (Drosophila)-like 1" FT CDS join(929529..929896,932418..>932742) FT /codon_start=1 FT /gene="DRIL1" FT /product="DRIL1 DNA binding protein homolog" FT /note="dead ringer like 1 protein; Human homolog of mouse FT Bright protein (B cell- specific trans-activator), FT Drosophila dead ringer DNA binding protein and FT Caenorhabditis elegans ORF T23D8.8" FT /protein_id="AAC28499.1" FT /translation="MKLQAVMETLLQRQQRARQELEARQQLPPDPPAAPPGRARAAPDE FT DREPESARMQRAQMAALAAMRAAAAGLGHPASPGGSEDGPPGSEEEDAAREGTPGSPGR FT GREGPGEEHFEDMASDEDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLGPPG FT PASLGTTALFPRKAQPPQAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGD FT WTYEEQFKQ" FT repeat_region 929631..929658 FT /rpt_family="GC_rich" FT repeat_region 929986..930259 FT /rpt_family="AluJo" FT repeat_region 930271..930504 FT /rpt_family="AluSq" FT repeat_region complement(930512..930808) FT /rpt_family="AluY" FT repeat_region 931013..931303 FT /rpt_family="AluJo" FT repeat_region 931305..931470 FT /rpt_family="AluSg/x" FT repeat_region 931531..931832 FT /rpt_family="AluY" FT repeat_region complement(931997..932156) FT /rpt_family="AluJ" FT misc_feature 932418..932742 FT /gene="DRIL1" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 932430..932523 FT /rpt_family="(GGA)n" FT repeat_region complement(932625..932677) FT /rpt_family="GC_rich" FT repeat_region complement(934775..934907) FT /rpt_family="AluJ" FT repeat_region complement(935251..935273) FT /rpt_family="GC_rich" FT repeat_region complement(935482..935764) FT /rpt_family="AluJo" FT repeat_region complement(935791..936089) FT /rpt_family="AluY" FT repeat_region 936271..936555 FT /rpt_family="AluJo" FT repeat_region 936565..936858 FT /rpt_family="AluY" FT repeat_region complement(936860..936986) FT /rpt_family="L1MB5" FT repeat_region 936987..937283 FT /rpt_family="AluSx" FT repeat_region complement(937287..937704) FT /rpt_family="L1MB5" FT repeat_region complement(937705..938006) FT /rpt_family="AluY" FT repeat_region complement(938011..938143) FT /rpt_family="AluSq/x" FT repeat_region complement(938144..938214) FT /rpt_family="L1MB5" FT repeat_region complement(938344..938500) FT /rpt_family="MIR" FT repeat_region complement(938929..939108) FT /rpt_family="AluSg/x" FT repeat_region complement(939118..939416) FT /rpt_family="AluSc" FT repeat_region 940198..940383 FT /rpt_family="MER30" FT repeat_region complement(941017..941129) FT /rpt_family="(CGG)n" FT repeat_region complement(941615..941746) FT /rpt_family="AluJb" FT repeat_region complement(941774..941863) FT /rpt_family="(CA)n" FT repeat_region 942879..943002 FT /rpt_family="MLT1C" FT repeat_region 943003..943280 FT /rpt_family="AluJo" FT repeat_region 943285..943587 FT /rpt_family="AluSx" FT repeat_region 943588..943728 FT /rpt_family="MLT1C" FT repeat_region complement(944136..944212) FT /rpt_family="LINE2" FT repeat_region complement(944295..944410) FT /rpt_family="(CA)n" FT repeat_region complement(944640..944853) FT /rpt_family="AluJo" FT repeat_region 945195..945283 FT /rpt_family="MIR" FT repeat_region complement(946207..946257) FT /rpt_family="POLY_A" FT repeat_region complement(946260..946433) FT /rpt_family="AluSg/x" FT repeat_region complement(946441..946739) FT /rpt_family="AluSx" FT repeat_region complement(946792..947094) FT /rpt_family="AluJb" FT repeat_region 947443..947473 FT /rpt_family="MIR" FT repeat_region 948210..948272 FT /rpt_family="LINE2" FT repeat_region complement(948708..949016) FT /rpt_family="AluSx" FT repeat_region complement(949527..949609) FT /rpt_family="AluJ/FLAM" FT repeat_region complement(949675..949968) FT /rpt_family="AluSx" FT repeat_region complement(950821..951063) FT /rpt_family="AluSp" FT repeat_region complement(950821..951121) FT /rpt_family="AluSp" FT repeat_region complement(951140..951256) FT /rpt_family="FLAM_C" FT repeat_region 951275..951570 FT /rpt_family="AluSg" FT repeat_region 951854..952154 FT /rpt_family="AluSx" FT repeat_region 952163..952461 FT /rpt_family="AluJo" FT repeat_region 953792..954057 FT /rpt_family="AluJo" FT misc_feature 955495..955581 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 58.000" FT repeat_region complement(955829..955990) FT /rpt_family="MLT1C" FT repeat_region complement(956042..956134) FT /rpt_family="MLT1C" FT repeat_region complement(956314..956393) FT /rpt_family="LINE2" FT repeat_region complement(956776..956813) FT /rpt_family="MIR" FT repeat_region 957389..957415 FT /rpt_family="MIR" FT repeat_region 957567..957862 FT /rpt_family="AluJo" FT repeat_region 957864..958130 FT /rpt_family="AluSx" FT repeat_region 958131..958151 FT /rpt_family="AT_rich" FT repeat_region 958152..958447 FT /rpt_family="AluY" FT repeat_region complement(958555..958622) FT /rpt_family="MER7A" FT repeat_region 958623..958902 FT /rpt_family="AluY" FT repeat_region complement(958905..959139) FT /rpt_family="MER7A" FT repeat_region complement(959272..959562) FT /rpt_family="AluJb" FT repeat_region 959563..959633 FT /rpt_family="MLT1C" FT repeat_region 959681..959786 FT /rpt_family="MLT1C" FT mRNA <960089..972807 FT /product="Homo sapiens dead ringer like 1 protein (DRIL1) FT mRNA" FT gene <960089..972065 FT /gene="DRIL1" FT /note="Homo sapiens dead ringer-like 1 protein locus" FT CDS join(<960089..960164,964248..964431,964833..965080, FT 966572..966868,968405..968503,971878..972065) FT /codon_start=1 FT /gene="DRIL1" FT /product="DRIL1 DNA binding protein homolog, partial CDS" FT /note="Drosophila dead ringer-like protein homolog" FT /protein_id="AAC28918.1" FT /translation="QLYELDGDPKRKEFLDDLFSFMQKRGTPVNRIPIMAKQVLDLFML FT YVLVTEKGGLVEVINKKLWREITKGLNLPTSITSAAFTLRTQYMKYLYPYECEKRGLSN FT PNELQAAIDSNRREGRRQSFGGSLFAYSPGGAHGMLSSPKLPVSSLGLAASTNGSSITP FT APKIKKEEDSAIPITVPGRLPVSLAGHPVVAAQAAAVQAAAAQAAVAAQAAALEQLREK FT LESAEPPEKKMALVADEQQRLMQRALQQNFLAMAAQLPMSIRINSQASESRQDSAVNLT FT GTNGSNSISMSVEINGIMYTGVLFAQPPAPTPTSAPNKGGGGGGGSSSNAGGRGGNTGT FT SGGQAGPAGLSTPSTSTSNNSLP" FT repeat_region 960676..960722 FT /rpt_family="MIR" FT repeat_region 961637..961931 FT /rpt_family="AluSx" FT repeat_region complement(962514..962814) FT /rpt_family="AluSq" FT repeat_region 964065..964222 FT /rpt_family="MER20" FT repeat_region 965501..965701 FT /rpt_family="AluJo" FT repeat_region 965710..966011 FT /rpt_family="AluSx" FT repeat_region 966012..966177 FT /rpt_family="AluSg/x" FT repeat_region 966178..966478 FT /rpt_family="AluSp" FT misc_feature 966572..966868 FT /gene="DRIL1" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 93.000.~BLASTN FT similarity to T54949 (27..233); match: 0.91, score: FT 2.1e-82; database searched: est; yb42b07.r1 Homo sapiens FT cDNA clone 73813 5'.~" FT repeat_region 966643..966742 FT /rpt_family="(CAG)n" FT repeat_region 966977..967278 FT /rpt_family="AluSq" FT repeat_region 967286..967578 FT /rpt_family="AluJo" FT repeat_region complement(967598..967725) FT /rpt_family="LINE2" FT repeat_region 967763..968063 FT /rpt_family="AluSx" FT repeat_region 968079..968377 FT /rpt_family="AluY" FT repeat_region complement(968788..968953) FT /rpt_family="AluJo" FT repeat_region 968954..969093 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(969105..969126) FT /rpt_family="AT_rich" FT repeat_region complement(969132..969240) FT /rpt_family="L1MA3" FT repeat_region 969255..969534 FT /rpt_family="AluJb" FT repeat_region complement(969555..969685) FT /rpt_family="(TA)n" FT repeat_region complement(969687..969988) FT /rpt_family="AluSx" FT repeat_region 969993..970030 FT /rpt_family="AT_rich" FT repeat_region 970034..970332 FT /rpt_family="AluSg" FT repeat_region complement(970333..970354) FT /rpt_family="AT_rich" FT repeat_region 970366..970482 FT /rpt_family="AluJo" FT repeat_region complement(970506..970771) FT /rpt_family="AluSg" FT repeat_region 971199..971319 FT /rpt_family="AluJo" FT repeat_region 971331..971633 FT /rpt_family="AluSx" FT repeat_region 971634..971777 FT /rpt_family="AluJo" FT repeat_region 971931..972018 FT /rpt_family="(CGG)n" FT misc_feature 971981..972248 FT /note="DDS similarity to EST: ~AA371391 EST83171 Prostate FT gland I Homo sapiens cDNA 5' end; Score: 516 Identity: FT 263/268 (98%)." FT repeat_region complement(972223..972261) FT /rpt_family="(TA)n" FT repeat_region 972782..972831 FT /rpt_family="POLY_A" FT misc_feature complement(972837..972923) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 86.000" FT repeat_region complement(973106..973407) FT /rpt_family="AluSq" FT repeat_region 975595..975635 FT /rpt_family="AT_rich" FT repeat_region 975731..975777 FT /rpt_family="POLY_A" FT repeat_region 976111..976413 FT /rpt_family="AluSq" FT repeat_region 976415..976622 FT /rpt_family="MER20" FT repeat_region 976858..977051 FT /rpt_family="MER20" FT repeat_region 977754..977968 FT /rpt_family="AluJo" FT repeat_region complement(977971..978270) FT /rpt_family="AluSg" FT repeat_region complement(978273..978550) FT /rpt_family="AluSx" FT repeat_region 978578..978865 FT /rpt_family="AluSx" FT repeat_region 978875..979161 FT /rpt_family="AluY" FT repeat_region 979169..979199 FT /rpt_family="AT_rich" FT misc_feature 979314..979415 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 51.000" FT misc_feature 980552..980634 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 69.000" FT repeat_region 980894..981187 FT /rpt_family="AluJo" FT repeat_region 981188..981487 FT /rpt_family="AluSg" FT repeat_region 981502..981816 FT /rpt_family="AluSx" FT repeat_region 981833..982078 FT /rpt_family="AluYb8" FT repeat_region complement(982080..982264) FT /rpt_family="AluYb8" FT repeat_region 982266..982294 FT /rpt_family="AT_rich" FT repeat_region 982301..982600 FT /rpt_family="AluSx" FT repeat_region 982820..982964 FT /rpt_family="GC_rich" FT repeat_region 983161..983280 FT /rpt_family="FLAM_C" FT repeat_region complement(983309..983561) FT /rpt_family="AluSx" FT repeat_region 983758..983893 FT /rpt_family="AluJb" FT misc_feature 984037..984204 FT /note="BLASTN similarity to Z60961 (22..183); match: 0.91, FT score: 8.8e-40; database searched: nt; H.sapiens CpG DNA, FT clone 3e5, forward read cpg3e5.ft1z ." FT misc_feature complement(984210..984608) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 65.000" FT repeat_region complement(984243..984298) FT /rpt_family="GC_rich" FT misc_feature 984348..984540 FT /note="BLASTN similarity to T10033 (16..208); match: 0.95, FT score: 4.2e-67; database searched: est; seq1505 Homo FT sapiens cDNA clone b4HB3MA-COT8-HAP-Ft54 5'." FT repeat_region complement(985169..985468) FT /rpt_family="AluSx" FT repeat_region complement(985475..985504) FT /rpt_family="MIR" FT CDS join(<984349..984563,985865..985975,989762..989895, FT 990223..990358,990852..990995,991081..991145, FT 991227..991351,991955..992121,994019..994087, FT 994212..994343) FT /codon_start=3 FT /product="R32184_1" FT /note="Hypothetical human protein (partial CDS); CDS FT constructed from combination of BLASTX, EST matches and FT Xgrail predictions. N-terminus of protein likely encoded in FT flanking cosmid R29942. Predicted protein exhibits weak FT similarity to hypothetical protein PID|e1226191 (AL021106) FT from Drosophila melanogaster" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC12679.1" FT /translation="KMAAPMEVAVCTDSAAPMWSCIVWELHSGANLLTYRGGQAGPRGL FT ALLNGEYLLAAQLGKNYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLAGVAESI FT HLWEVSTGNLLVILSRHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQADPSRIP FT APRHVWSHHALPITDLHCGFGGPLARVATSSLDQTLWEVSSGELLLSVLFDVSIMAVTM FT DLAEHHMFCGGSEGSIFQVDLFTWPGQRERSFHPEQDAGKVFKGHRNQVTCLSVSTDGS FT VLLSGSHDETVRLWDVQSKQCIRTVALKGPVTNAAILLAPVSMLSSDFRPSLPLPHFNK FT HLLGAEHGDEPRHGGLTLRLGLHQQGSEPSYLDRTEQLQAVLCSTMEKSVLGGQDQLRV FT RVTELEDEVRNLRKINRDLFDFSTRFITRPAK" FT misc_feature 985865..985975 FT /note="DDS similarity to overlapping ESTs:~AA065921 FT mj80d01.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone FT 482401 5' similar to WP:R166.4 CE03583 ; (215..325); 86% FT identity.~~R49742 yg71f12.r1 Homo sapiens cDNA clone 38663 FT 5'; (213..324); 98% identity.~~AA288950 mr43g11.r1 Life FT Tech mouse embryo 15 5dpc 10667012 Mus musculus cDNA clone FT 600260 5' similar to WP:R166.4 CE03583 ; (207..317); 86% FT identity.~~AA473034 vd43g07.r1 Barstead MPLRB1 Mus musculus FT cDNA~ clone 803388 5' similar to WP:R166.4 CE03583 ; FT (221..331); 82% identity.~~Other overlapping EST FT matches:~AA879615" FT repeat_region complement(986314..986568) FT /rpt_family="AluSq" FT repeat_region 986694..986823 FT /rpt_family="MER58A" FT repeat_region 987065..987351 FT /rpt_family="AluSx" FT repeat_region complement(987427..987547) FT /rpt_family="AluJo" FT repeat_region complement(987833..988129) FT /rpt_family="AluSx" FT repeat_region complement(988577..988985) FT /rpt_family="MLT1C" FT misc_feature 989762..989895 FT /note="DDS similarity to overlapping ESTs:~(7990..8123) FT AA065921 mj80d01.r1 Soares mouse p3NMF19.5 Mus musculus FT cDNA clone 482401 5' similar to WP:R166.4 CE03583 ; FT (326..459); 85% identity.~~(7990..8129) R49742 yg71f12.r1 FT Homo sapiens cDNA clone 38663 5'; (325..477); 84% FT identity.~~(7990..8123) AA288950 mr43g11.r1 Life Tech mouse FT embryo 15 5dpc 10667012 Mus musculus cDNA clone 600260 5' FT similar to WP:R166.4 CE03583 ; (318..452); 84% identity. FT ~~(7990..8123) AA473034 vd43g07.r1 Barstead MPLRB1 Mus FT musculus cDNA clone 803388 5' similar to WP:R166.4 CE03583 FT ; (332..465); 85% identity.~~(7990..8106) predicted exon, FT program: grail2exons_human_1.3, frame: 0, quality: FT excellent, score: 90.000~~Other overlapping EST FT matches:~AA879615" FT misc_feature 990223..990312 FT /note="DDS similarity to overlapping ESTs:~(8451..8536) FT AA288950 mr43g11.r1 Life Tech mouse embryo 15 5dpc 10667012 FT Mus musculus cDNA clone 600260 5' similar to WP:R166.4 FT CE03583 ; (453..538); 81% identity.~~(8451..8540) A473034 FT vd43g07.r1 Barstead MPLRB1 Mus musculus cDNA clone 803388 FT 5' similar to WP:R166.4 CE03583 ; (466..555); 82% FT identity." FT misc_feature 990427..990954 FT /note="DDS similarity to AA160644 zq49b12.r1 Stratagene hNT FT neuron (#937233) Homo sapiens cDNA clone 633023 5'~Score: FT 901 Identity: 503/517 (97%).~" FT misc_feature 990852..990995 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 83.000~~(9108..9223) FT DDS similarity to AA145646 mr63h08.r1 Stratagene mouse FT testis (#937308) Mus musculus cDNA clone 602175 5'; FT (1..116); 81% identity.~~(9111..9223) AA155725 zo52b10.r1 FT Stratagene pancreas (#937208) Homo sapiens cDNA clone FT 590491 5'; (1..113); 100% identity.~~(9120..9223) AA053570 FT zl73b02.r1 Stratagene colon (#937204) Homo sapiens cDNA FT clone 510219 5'; (1..105); 100% identity." FT misc_feature 991081..991145 FT /note="DDS similarity to overlapping ESTs:~AA145646 FT mr63h08.r1 Stratagene mouse testis (#937308) Mus musculus FT cDNA clone 602175 5'; (117..181); 85% identity.~~AA155725 FT zo52b10.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 590491 5'; (114..178); 100% identity.~~AA053570 FT zl73b02.r1 Stratagene colon (#937204) Homo s~apiens cDNA FT clone 510219 5'; (105..169); 97% identity.~~(9337..9373) FT AA133517 zl92d01.r1 Stratagene colon (#937204) Homo sapiens FT cDNA clone 512065 5'; (1..37); 100% identity.~" FT misc_feature 991227..991351 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA155725 zo52b10.r1 FT Stratagene pancreas (#937208) Homo sapiens cDNA clone FT 590491 5'; (179..310); 92% identity.~(9455..9516) AA145646 FT mr63h08.r1 Stratagene mouse testis (#937308) Mus musculus FT cDNA clone 602175 5'; (182..243); 89% identity.~~AA133517 FT zl92d01.r1 Stratagene colon (#937204) Homo sapiens cDNA FT clone 512065 5'; (38..161); 96% identity.~~AA279371 FT zs84e02.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:704186 5'; (17..140); 97% identity.~~(9455..9498) FT AA053570 zl73b02.r1 Stratagene colon (#937204) Homo sapiens FT cDNA clone 510219 5'; (170..213); 100% identity." FT repeat_region complement(991439..991561) FT /rpt_family="(CAGC)n" FT repeat_region complement(991615..991730) FT /rpt_family="(CAGC)n" FT misc_feature 991955..992121 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA133517 zl92d01.r1 FT Stratagene colon (#937204) Homo sapiens cDNA clone 512065 FT 5'; (162..329); 99% identity.~~AA279371 zs84e02.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:704186 5'; FT (141..306); 97% identity." FT misc_feature 993719..993862 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 64.000" FT misc_feature 994019..994087 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA279371 zs84e02.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:704186 5'; FT (307..374); 98% identity.~~(12249..12315) AA552254 FT nk06d10.s1 NCI_CGAP_Co2 Homo sapiens cDNA clone FT IMAGE:1012723; (354..288); 100% identity.~~AA053559 FT zl73b02.s1 Stratagene colon (#937204) Homo sapiens cDNA FT clone 510219 3'; (357..423); 97% identity.~~(12249..12315) FT AA565521 nk42a08.s1 NCI_CGAP_GC2 Homo sapiens cDNA clone FT IMAGE:1016150; (421..355); 100% identity." FT misc_feature 994212..994555 FT /note="(12440..12567) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 100.000~~DDS similarity to overlapping ESTs:~(12440..12467) FT AA279371 zs84e02.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:704186 5'; (375..402); 100% identity.~~(12440..12727) FT AA552254 nk06d10.s1 NCI_CGAP_Co2 Homo sapiens cDNA clone FT IMAGE:1012723; (287..1); 98% identity.~~(12440..12782) FT AA565521 nk42a08.s1 NCI_CGAP_GC2 Homo sapiens cDNA clone FT IMAGE:1016150; (354..9); 97% identity.~~(12783..12440) FT AA053559 zl73b02.s1 Stratagene colon (#937204) Homo sapiens FT cDNA clone 510219 3'; (11..356); 98% identity.~~And many FT others..." FT misc_feature 996474..996772 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 64.000" FT repeat_region 996752..996853 FT /rpt_family="L1MB3" FT repeat_region complement(996866..997166) FT /rpt_family="AluSx" FT repeat_region 997169..997246 FT /rpt_family="L1MB3" FT repeat_region 997383..997676 FT /rpt_family="AluSx" FT repeat_region 997686..997775 FT /rpt_family="L1MA4" FT repeat_region 997785..998073 FT /rpt_family="AluJo" FT repeat_region 998099..998422 FT /rpt_family="L1MB3" FT repeat_region complement(998476..998522) FT /rpt_family="MIR" FT repeat_region complement(998885..998923) FT /rpt_family="(CA)n" FT repeat_region complement(999262..999294) FT /rpt_family="LINE2" FT repeat_region complement(999812..1000108) FT /rpt_family="AluSg" FT repeat_region complement(1000321..1000388) FT /rpt_family="GC_rich" FT CDS join(1000437..1000862,1003129..1003721,1004520..1005552, FT 1007627..1007772,1007855..1007970,1008139..1008290, FT 1008617..1008781,1008856..1008930) FT /codon_start=1 FT /product="R32184_2" FT /note="Hypothetical human protein most similar to Rat FT ionotropic glutamate receptor (L34938); CDS constructed FT primarily from XGRAIL predictions and BLASTX similarity to FT (L34938) ionotropic glutamate receptor [Rattus norvegicus] FT and gi|2160125 (U29873) NMDAR-L [Rattus norvegicus]. Also FT exhibits similarity to PID|e258718 (Z78413) T01C3.10 FT [Caenorhabditis elegans]. C-terminus of hypothetical FT protein is ill-defined at this point; definition will FT require identification and characterization of appropriate FT cDNAs" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC12680.1" FT /translation="MEFVRALWLGLALALGPGSAGGHPQPCGVLARLGGSVRLGALLPR FT APLARARARAALARAALAPRLPHNLSLELVVAAPPARDPASLTRGLCQALVPPGVAALL FT AFPEARPELLQLHFLAAATETPVLSLLRREARAPLGAPNPFHLQLHWASPLETLLDVLV FT AVLQAHAWEDVGLALCRTQDPGGLVALWTSRAGRPPQLVLDLSRRDTGDAGLRARLAPM FT AAPVGGEAPVPAAVLLGCDIARARRVLEAVPPGPHWLLGTPLPPKALPTAGLPPGLLAL FT GEVARPPLEAAIHDIVQLVARALGSAAQVQPKRALLPAPVNCGDLQPAGPESPGRFLAR FT FLANTSFQGRTGPVWVTGSSQVHMSRHFKVWSLRRDPRGAPAWATVGSWRDGQLDLEPG FT GASARPPPPQGAQVWPKLRVVTLLEHPFVFARDPDEDGQCPAGQLCLDPGTNDSATLDA FT LFAALANGSAPRALRKCCYGYCIDLLERLAEDTPFDFELYLVGDGKYGALRDGRWTGLV FT GDLLAGRAHMAVTSFSINSARSQVVDFTSPFFSTSLGIMVRARDTASPIGAFMWPLHWS FT TWLGVFAALHLTALFLTVYEWRSPYGLTPRGRNRSTVFSYSSALNLCYAILFRRTVSSK FT TPKCPTGRLLMNLWAIFCLLVLSSYTANLAAVMVGDKTFEELSGIHDPKLHHPAQGFRF FT GTVWESSAEAYIKKSFPDMHAHMRRHSAPTTPRGVAMLTSDPPKLNAFIMDKSLLDYEV FT SIDADCKLLTVGKPFAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVP FT CGKRVFAVTETLQMSIYHFAGLFVLLCLGLGSALLSSLGEHAFFRLALPRIRKGSRLQY FT WLHTSQKIHRALNTEPPEGSKEETAEAEPR" FT repeat_region complement(1000463..1000540) FT /rpt_family="GC_rich" FT repeat_region 1000541..1000633 FT /rpt_family="SUBTEL_sat" FT repeat_region complement(1000664..1000743) FT /rpt_family="GC_rich" FT repeat_region complement(1000829..1000879) FT /rpt_family="GC_rich" FT repeat_region 1002046..1002382 FT /rpt_family="AluJo" FT repeat_region 1002383..1002483 FT /rpt_family="AluY" FT repeat_region 1003804..1004094 FT /rpt_family="AluJb" FT repeat_region 1005682..1005717 FT /rpt_family="AT_rich" FT repeat_region 1005718..1006020 FT /rpt_family="AluSx" FT repeat_region complement(1006031..1006148) FT /rpt_family="FLAM_C" FT repeat_region complement(1006151..1006442) FT /rpt_family="AluSg" FT repeat_region complement(1006447..1006638) FT /rpt_family="AluSp" FT repeat_region complement(1007226..1007362) FT /rpt_family="LINE2" FT repeat_region 1007383..1007575 FT /rpt_family="MER20" FT repeat_region 1007777..1007849 FT /rpt_family="GC_rich" FT repeat_region complement(1008789..1008823) FT /rpt_family="GC_rich" FT repeat_region 1009186..1009212 FT /rpt_family="(CAG)n" FT repeat_region 1009367..1009413 FT /rpt_family="GC_rich" FT misc_feature 1009645..1010112 FT /note="DDS similarity to overlapping ESTs:~(27873..28175) FT AA516290 nf68h07.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:925117. Score: 570 Identity: 294/303 FT (97%).~~(27879..28340) AA053907 zf52e06.r1 Soares retina FT N2b4HR Homo sapiens cDNA clone 380578 5'. Score: 788 FT Identity: 440/450 (97%).~~(27880..28325) AA460972 FT zx63c08.s1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 796142 3'; (18..460); 97% identity.~~(28356..27880) FT AA461282 zx63c08.r1 Soares total fetus Nb2HF8 9w Homo FT sapiens cDNA clone 796142 5'. Score: 888 Identity: 469/474 FT (98%).~~And many others..." FT CDS complement(join(1010067..1010144,1010700..1010894, FT 1011095..1011194,1011366..1011498,1011579..1011662, FT 1011740..1011797,1011891..1011991,1012065..1012187, FT 1012462..1012572,1013240..1013339,1014191..1014472, FT 1020771..1020995)) FT /codon_start=1 FT /product="R32184_3" FT /note="Hypothetical 59.8 kDa human protein; CDS constructed FT from EST matches and Xgrail predictions. C-terminus of FT predicted protein not fully confirmed by EST or cDNA FT coverage. Hypothetical protein exhibits no significant FT database similarities when queried against the nr database FT using BLASTX" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC12681.1" FT /translation="MSEHVEPAAPGPGPNGGGGGPAPARGPRTPNLNPNPLINVRDRLF FT HALFFKMAVTYSRLFPPAFRRLFEFFVLLKALFVLFVLAYIHIVFSRSPINCLEHVRDK FT WPREGILRVEVRHNSSRAPVFLQFCDSGGRGSFPGLAVEPGSNLDMEDEEEEELTMEMF FT GNSSIKFELDIEPKVFKPPSSTEALNDSQEFPFPETPTKVWPQDEYIVEYSLEYGFLRL FT SQATRQRLSIPVMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKG FT FLRNVVSGEHYRFVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQML FT EMNMAIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTST FT SKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQV FT RIQEMLLQAPPLGPGTPTALPDDMNNNSGAPATAPDSAGQPPALGPVFELVSKERGWGS FT AEGSGGVLVGLQ" FT misc_feature complement(1010361..1010591) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 55.000" FT misc_feature complement(1010700..1010894) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 83.000" FT misc_feature complement(1011095..1011194) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(1011366..1011498) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA278946 zs78e07.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:703620 5'; FT (166..34); 100% identity.~~AA485593 zx90e10.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 811050 5'; (155..22); FT 100% identity.~~AA278619 zs78g07.r1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone IMAGE:703644 5'; (166..34); 100% FT identity.~~AA292263 zt50f09.r1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 725801 5'; (155..23); 100% FT identity." FT repeat_region complement(1011526..1011566) FT /rpt_family="GC_rich" FT misc_feature complement(1011579..1011662) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA278946 zs78e07.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:703620 5'; FT (250..167); 100% identity.~~AA485593 zx90e10.r1 Soares FT ovary tumor NbHOT Homo sapiens cDNA clone 811050 5'; FT (239..156); 100% identity.~~AA278619 zs78g07.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:703644 5'; FT (248..167); 98% identity.~~AA292263 zt50f09.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 725801 5'; (238..156); FT 99% identity." FT repeat_region 1011674..1011731 FT /rpt_family="GC_rich" FT misc_feature complement(1011740..1011797) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 90.000~~DDS similarity FT to overlapping ESTs:~AA278946 zs78e07.r1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone IMAGE:703620 5'; (308..251); 100% FT identity.~~AA485593 zx90e10.r1 Soares ovary tumor NbHOT FT Homo sap~iens cDNA clone 811050 5'; (297..240); 100% FT identity.~~AA278619 zs78g07.r1 NCI_CGAP_GCB1 Homo sapiens FT cDNA clone IMAGE:703644 5'; (306..249); 100% FT identity.~~AA292263 zt50f09.r1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 725801 5'; (296..239); 98% FT identity." FT misc_feature complement(1011891..1011991) FT /note="DDS similarity to overlapping ESTs:~AA278946 FT zs78e07.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:703620 5'; (408..309); 99% identity.~~AA485593 FT zx90e10.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 811050 5'; (397..298); 98% identity.~~AA278619 zs78g07.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:703644 5'; FT (404..307); 98% identity.~~AA292263 zt50f09.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 725801 5'; (396..297); FT 98% identity.~~AA278622 zs78g08.s1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone IMAGE:703646 3'; (444..540); 100% FT identity.~~(30219..30101) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 100.000~~Other overlapping EST matches:~AA844188, AA854136" FT repeat_region complement(1012013..1012055) FT /rpt_family="GC_rich" FT misc_feature complement(1012065..1012187) FT /note="DDS similarity to overlapping ESTs:~(30415..30293) FT AA292263 zt50f09.r1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 725801 5'; (519..397); 100% FT identity.~~(30415..30293) AA278622 zs78g08.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:703646 3'; (321..443); 100% FT identity.~~(30389..30293) AA278619 zs78g07.r1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:703644 5'; (501..405); 100% FT identity.~~(30352..30293) AA485593 zx90e10.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 811050 5'; (457..398); FT 100% identity.~~(30415..30269) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 100.000~~Other overlapping matches:~AA843762, AA844188, FT AA854370, AA854136" FT misc_feature complement(1012462..1012572) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA278622 zs78g08.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:703646 3'; FT (210..320); 98% identity.~~(30726..30690) AA292263 FT zt50f09.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 725801 5'; (556..520); 98% identity.~~(30800..30560) FT AA278622 zs78g08.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:703646 3'; (215..454); 99% identity.~~Other FT overlapping matches:~AA843762, AA854136, AA854370" FT misc_feature complement(1013240..1013339) FT /note="DDS similarity to overlapping ESTs:~AA278622 FT zs78g08.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:703646 3'; (110..209); 100% identity.~~AA278622 FT zs78g08.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:703646 3'; (115..214); 100% identity.~~(31611..31468) FT predicted exon, program: grail2exons_human_1.3, frame: 1, FT quality: excellent, score: 90.000~~(31567..31530) AA030164 FT mh86e09.r1 Soares mouse placenta 4NbMP13.5 14.5 Mus FT musculus cDNA clone 457864 5'; (38..1); 92% FT identity.~~Other overlapping matches:~AA844116, AA854370, FT AA844188, AA843762, AA854136." FT misc_feature complement(1014191..1014472) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(32700..32419) AA030164 FT mh86e09.r1 Soares mouse placenta 4NbMP13.5 14.5 Mus FT musculus cDNA clone 457864 5'; (296..39); 74% FT identity.~~(32700..32521) W09871 ma65f07.r1 Soares mouse FT p3NMF19.5 Mus musculus cDNA clone 315589 5'; (209..385); FT 82% identity.~~(32700..32576) AA215312 zr94e10.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:683370 5'; FT (330..458); 95% identity.~~(32531..32419) AA428327 FT zw18e04.s1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 769662 3'; (1..114); 96% identity.~~(32528..32419) AA278622 FT zs78g08.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:703646 3'; (1..109); 95% identity.~~(32700..32698) FT W25145 zb69b03.r1 Soares fetal lung NbHL19W Homo sapiens FT cDNA clone 308813 5'; (353..465); 91% FT identity.~~(32700..32569) H86803 ys72e06.s1 Homo sapiens FT cDNA clone 220354 3'; (132..1); 100% FT identity.~~(32700..32578) AA256180 zr79d06.s1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 681899 3'; (123..1); 98% FT identity.~~Other overlapping EST matches:~AA843762, FT AA844188, AA844116, AA854370, AA854136." FT repeat_region 1015248..1015384 FT /rpt_family="MER20" FT misc_feature complement(1015503..1015776) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 54.000" FT repeat_region 1018703..1019005 FT /rpt_family="AluSx" FT misc_feature complement(1020771..1020995) FT /note="(39223..38969) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 81.000~~DDS similarity to overlapping ESTs:~(39358..39028) FT H86865 ys72e06.r1 Homo sapiens cDNA clone 220354 5'.; FT (14..340); 90% identity.~(39360..38999) W25145 zb69b03.r1 FT Soares fetal lung NbHL19W Homo sapiens cDNA clone 308813 FT 5'; (1..351); 91% identity.~~(39333..38999) AA215312 FT zr94e10.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:683370 5'; (1..329); 90% identity.~~(39216..38999) FT W09871 ma65f07.r1 Soares mouse p3NMF19.5 Mus musculus cDNA FT clone 315589 5'; (1..208); 82% identity.~~(39136..38999) FT AA030164 mh86e09.r1 Soares mouse placenta 4NbMP13.5 14.5 FT Mus musculus cDNA clone 457864 5'; (434..297); 90% FT identity.~~(39153..38999) H86803 ys72e06.s1 Homo sapiens FT cDNA clone 220354 3'; (288..133); 97% FT identity.~~(39141..38999) AA256180 zr79d06.s1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 681899 3'; (266..124); 100% FT identity.~" FT repeat_region 1020916..1020968 FT /rpt_family="GC_rich" FT repeat_region complement(1021039..1021146) FT /rpt_family="(CGG)n" FT repeat_region 1021521..1021627 FT /rpt_family="U6" FT misc_feature 1021521..1021627 FT /note="BLASTN similarity to X59362 (1..107); match: 1, FT score: 3.5e-35; database searched: nt; H.sapiens U6 snRNA" FT repeat_region complement(1021896..1022189) FT /rpt_family="AluSx" FT repeat_region complement(1022203..1022503) FT /rpt_family="AluSg1" FT repeat_region 1022510..1022696 FT /rpt_family="AluJo" FT repeat_region 1022733..1022980 FT /rpt_family="MER58B" FT repeat_region complement(1022989..1023119) FT /rpt_family="MER33" FT repeat_region 1023123..1023420 FT /rpt_family="AluJo" FT repeat_region 1023423..1023723 FT /rpt_family="AluY" FT repeat_region 1023897..1024165 FT /rpt_family="AluJo" FT repeat_region 1024166..1024256 FT /rpt_family="(TA)n" FT repeat_region 1024314..1024489 FT /rpt_family="AluSx" FT repeat_region 1024596..1024892 FT /rpt_family="AluY" FT repeat_region complement(1024898..1025018) FT /rpt_family="MER3" FT repeat_region 1025059..1025191 FT /rpt_family="AluSq/x" FT repeat_region 1025196..1025234 FT /rpt_family="(TAAAA)n" FT repeat_region complement(1025549..1025571) FT /rpt_family="AT_rich" FT repeat_region complement(1025589..1025879) FT /rpt_family="AluSx" FT repeat_region complement(1025897..1026065) FT /rpt_family="FRAM" FT repeat_region complement(1026551..1026583) FT /rpt_family="GC_rich" FT repeat_region complement(1026585..1026660) FT /rpt_family="(CGGG)n" FT misc_feature 1026635..1026725 FT /note="BLASTN similarity to D83735 (2..92); match: 0.98, FT score: 3.5e-26; database searched: nt; Human adult heart FT mRNA for neutral calponin, complete cds" FT misc_feature 1026636..1026723 FT /note="(44889..44951) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 84.000~~DDS similarity to overlapping ESTs:~(44864..44951) FT AA168809 ms38b01.r1 Stratagene mouse heart (#937316) Mus FT musculus cDNA clone 613801 5' similar to gb:Z19543 FT M.musculus h2-calponin cDNA (MOUSE); (1..88); 100% FT identity.~~(44866..44951) AA310032 EST180878 Jurkat T-cells FT V Homo sapiens cDNA 5' end similar to neutral calponin; FT (1..86); 100% identity.~~(44866..44951) AA204797 zq61d02.r1 FT Stratagene neuroepithelium (#937231) Homo sapiens cDNA FT clone 646083 5' similar to SW:CLP2_MOUSE Q08093 CALPONIN FT H2, SMOOTH MUSCLE. ; (1..86); 100% FT identity.~~(44953..44866) AA074692 zm76f01.r1 Stratagene FT neuroepithelium (#937231) Homo sapiens cDNA clone 531577 5' FT similar to SW:CLP2_MOUSE Q08093 CALPONIN H2, SMOOTH MUSCLE. FT ; (87..1); 97% identity." FT repeat_region 1027392..1027523 FT /rpt_family="FLAM_C" FT misc_feature 1027550..1027737 FT /note="BLASTN similarity to Z58436 (1..189); match: 0.88, FT score: 1.2e-62; database searched: nt; H.sapiens CpG DNA, FT clone 3f11, reverse read cpg3f11.rt1h ." FT repeat_region complement(1028115..1028191) FT /rpt_family="MIR" FT misc_feature 1028119..1028231 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 76.000" FT repeat_region 1028681..1028760 FT /rpt_family="GC_rich" FT misc_feature 1033614..1035248 FT /note="NOTE: Transposon sequencing failed to verify the FT number of tandem repeat copies 6681-8315. Unsure number of FT repeat copies 6681-8315." FT misc_feature 1052351..1052738 FT /note="NOTE: Shatter libraries failed to resolve the FT dinucleotide repeat region 25418-25805. Unsure number of FT repeat copies 25418-25805. Forced join 25691." FT gene <1073145..1086005 FT /gene="KIAA0223" FT /note="anonymous mRNA; isolated from male bone marrow FT myeloblast cell line KG1" FT CDS join(<1073145..1073291,1073505..1073589,1073673..1073745, FT 1073947..1074013,1074103..1074240,1074342..1074406, FT 1074613..1074723,1074798..1074878,1077856..1078044, FT 1079702..1079839,1079927..1080117,1080254..1080378, FT 1080463..1080546,1080681..1080785,1080891..1081063, FT 1081549..1081737,1081823..1081960,1082839..1083065, FT 1083142..1083352,1084237..1084345,1085659..1086005) FT /codon_start=3 FT /gene="KIAA0223" FT /product="D1013901" FT /note="protein of unknown function with similarity to FT PTPL1-associated RhoGAP protein (U90920); 100% identical to FT residues 170- 1165 of protein encoded by KIAA0223 mRNA FT (D86976)" FT /protein_id="AAC03237.1" FT /translation="DLLEARRPRAHECLGEALRVMHQIISKYPLLNTVETLTAAGTLIA FT KVKAFHYESNNDLEKQEFEKALETIAVAFSSTVSEFLMGEVDSSTLLAVPPGDSSQSME FT SLYGPGSEGTPPSLEDCDAGCLPAEEVDVLLQRCEGGVDAALLYAKNMAKYMKDLISYL FT EKRTTLEMEFAKGLQKIAHNCRQSVMQEPHMPLLSIYSLALEQDLEFGHSMVQAVGTLQ FT TQTFMQPLTLRRLEHEKRRKEIKEAWHRAQRKLQEAESNLRKAKQGYVQRCEDHDKARF FT LVAKAEEEQAGSAPGAGSTATKTLDKRRRLEEEAKNKAEEAMATYRTCVADAKTQKQEL FT EDTKVTALRQIQEVIRQSDQTIKSATISYYQMMHMQTAPLPVHFQMLCESSKLYDPGQQ FT YASHVRQLQRDQEPDVHYDFEPHVSANAWSPVMRARKSSFNVSDVARPEAAGSPPEEGG FT CTEGTPAKDHRAGRGHQVHKSWPLSISDSDSGLDPGPGAGDFKKFERTSSSGTMSSTEE FT LVDPDGGAGASAFEQADLNGMTPELPVAVPSGPFRHEGLSKAARTHRLRKLRTPAKCRE FT CNSYVYFQGAECEECCLACHKKCLETLAIQCGHKKLQGRLQLFGQDFSHAARSAPDGVP FT FIVKKCVCEIERRALRTKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHDISNVLK FT LYLRQLPEPLISFRLYHELVGLAKDSLKAEAEAKAASRGRQDGSESEAVAVALAGRLRE FT LLRDLPPENRASLQYLLRHLRRIVEVEQDNKMTPGNLGIVFGPTLLRPRPTEATVSLSS FT LVDYPHQARVIETLIVHYGLVFEEEPEETPGGQDESSNQRAEVVVQVPYLEAGEAVVYP FT LQEAAADGCRESRVVSNDSDSDLEEASELLSSSEASALGHLSFLEQQQSEASLEVASGS FT HSGSEEQLEATAREDGDGDEDGPAQQLSGFNTNQSNNVLQAPLPPMRLRGGRMTLGSCR FT ERQPEFV" FT repeat_region complement(1074409..1074449) FT /rpt_family="GC_rich" FT repeat_region 1074883..1074920 FT /rpt_family="(CGGG)n" FT repeat_region complement(1075233..1075539) FT /rpt_family="AluSx" FT repeat_region complement(1075611..1075817) FT /rpt_family="AluJo" FT misc_feature 1075654..1076074 FT /gene="KIAA0223" FT /note="DDS similarity to AA648425 ns22c08.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:1184366. Score: 817 Identity: FT 416/420 (99%)." FT repeat_region complement(1076493..1076794) FT /rpt_family="AluSx" FT repeat_region complement(1076795..1076846) FT /rpt_family="AluSg/x" FT repeat_region complement(1076847..1077026) FT /rpt_family="AluJb" FT repeat_region complement(1077374..1077684) FT /rpt_family="AluSx" FT repeat_region complement(1078141..1078441) FT /rpt_family="AluY" FT repeat_region complement(1078444..1078707) FT /rpt_family="AluSg1" FT repeat_region complement(1078712..1078885) FT /rpt_family="AluJb" FT repeat_region 1078898..1079193 FT /rpt_family="AluY" FT repeat_region 1079218..1079521 FT /rpt_family="AluSx" FT repeat_region complement(1079528..1079628) FT /rpt_family="AluJb" FT repeat_region complement(1082271..1082306) FT /rpt_family="GC_rich" FT misc_feature 1082839..1083065 FT /gene="KIAA0223" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 92.000~~(10557..10769) FT DDS similarity to D63230|HUM510A12B Human placenta cDNA FT 5'-end GEN-510A12.(1..213); 99% identity." FT misc_feature 1083142..1083360 FT /gene="KIAA0223" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: FT 100.000~~(10846..11056) DDS similarity to D63230|HUM510A12B FT Human placenta cDNA 5'-end GEN-510A12.(214..419); 97% FT identity.~" FT misc_feature 1083631..1084160 FT /gene="KIAA0223" FT /note="DDS similarity to overlapping ESTs:~(11335..11749) FT AA402716 zu47c07.s1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 741132 3' similar to contains Alu repetitive FT element; contains element MER22 repetitive element ; Score: FT 799 Identity: 411/412 (99%).~~(11864..11445) AA402586 FT zu47d01.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 741121 5' similar to contains Alu repetitive FT element;contains element MER22 repetitive element ; Score: FT 836 Identity: 419/420 (99%)." FT repeat_region complement(1083744..1084040) FT /rpt_family="AluSq" FT repeat_region complement(1084762..1084802) FT /rpt_family="THE1B" FT repeat_region 1084803..1085089 FT /rpt_family="AluSx" FT repeat_region complement(1085090..1085419) FT /rpt_family="THE1B" FT repeat_region complement(1085433..1085584) FT /rpt_family="(GA)n" FT misc_feature 1085565..1086628 FT /note="DDS similarity to overlapping ESTs:~(13269..13632) FT T50948 yb88f12.r1 Homo sapiens cDNA clone 78287 5'. Score: FT 637 Identity: 356/369 (96%).~~(13592..14046) N94869 FT yy63b04.r1 Homo sapiens cDNA clone 278191 5'. Score: 670 FT Identity: 420/471 (89%).~~(13684..14241) AA210766 FT zr90c07.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:682956 5'. Score: 815 Identity: 504/541 FT (93%).~~(14303..13890) AA036957 zk32a09.s1 Soares pregnant FT uterus NbHPU Homo sapiens cDNA clone 484504 3'. Score: 802 FT Identity: 410/412 (99%). ~~(14332..14059) AA211888 FT zr90c07.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:682956 3'. Score: 483 Identity: 262/273 FT (95%).~~(14071..14328) AA303041 EST114072 Placenta II Homo FT sapiens cDNA 5' end similar to hypothetical protein FT KIAA0223. Score: 475 Identity: 249/257 (96%). FT ~~(14071..14331) AA303042 EST114073 Placenta II Homo FT sapiens cDNA 5' end similar to hypothetical protein FT KIAA0223. Score: 509 Identity: 259/260 (99%).~~Other FT overlapping EST matches: AA811117" FT misc_feature complement(1086685..1086962) FT /note="DDS similarity to Z42283|HSC0EC031 H. sapiens FT partial cDNA sequence; clone c-0ec03. Score: 540 Identity: FT 274/278 (98%)." FT repeat_region complement(1086993..1087160) FT /rpt_family="FRAM" FT repeat_region complement(1087165..1087451) FT /rpt_family="AluSp" FT repeat_region complement(1087452..1087653) FT /rpt_family="L1MB3" FT misc_feature 1087736..1087831 FT /note="DDS similarity to D45734|HUMGS02934 Human adult lung FT 3'directed MboI cDNA, HUMGS02934, clone lg2661. Score: 177 FT Identity: 94/97 (96%)." FT misc_feature 1088142..1088719 FT /note="DDS similarity to overlapping ESTs:~(15846..16442) FT AA604240 no87b12.s1 NCI_CGAP_AA1 Homo sapiens cDNA clone FT IMAGE:1113791 similar to gb:J04965 DNA-DIRECTED RNA FT POLYMERASE II 23 KD POLYPEPTIDE (HUMAN); Score: 1052 FT Identity: 571/593 (96%).~~(15865..16427) AA573162 FT nm51f03.s1 NCI_CGAP_Br2 Homo sapiens cDNA clone FT IMAGE:1071773 similar to gb:J04965 DNA-DIRECTED RNA FT POLYMERASE II 23 KD POLYPEPTIDE (HUMAN); Score: 1016 FT Identity: 543/557 (97%).~~(15870..16437)AA602612 no91c06.s1 FT NCI_CGAP_AA1 Homo sapiens cDNA clone IMAGE:1114186 similar FT to gb:J04965 DNA-DIRECTED RNA POLYMERASE II 23 KD FT POLYPEPTIDE (HUMAN); Score: 1045 Identity: 553/563 (98%). FT ~~(15872..16446) AA127833 zl12d08.r1 Soares pregnant uterus FT NbHPU Homo sapiens cDNA clone 501711 5' similar to FT gb:J04965 DNA-DIRECTED RNA POLYMERASE II 23 KD POLYPEPTIDE FT (HUMAN); Score: 1028 Identity: 551/571 FT (96%).~~(16423..16020) AA454915 zx79d10.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 809971 5' similar to FT gb:J04965 DNA-DIRECTED RNA POLYMERASE II 23 KD POLYPEPTIDE FT (HUMAN); (85..488); 99% identity.~~(16423..16117) W56537 FT zd16b06.r1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 340787 5' similar to gb:J04965 DNA-DIRECTED RNA FT POLYMERASE II 23 KD POLYPEPTIDE (HUMAN); (147..453); 99% FT identity.~~(16423..16290) AA583034 nn80e10.s1 NCI_CGAP_Co9 FT Homo sapiens cDNA clone IMAGE:1090218 similar to gb:J04965 FT DNA-DIRECTED RNA POLYMERASE II 23 KD POLYPEPTIDE (HUMAN); FT (417..550); 100% identity.~~Other EST matches: AA654443, FT AA430265, AA278272, AA764851, AA812335, T28551, AA779693" FT misc_feature complement(1089471..1089550) FT /note="DDS similarity to overlapping ESTs:~(17254..17175) FT AA583034 nn80e10.s1 NCI_CGAP_Co9 Homo sapiens cDNA clone FT IMAGE:1090218 similar to gb:J04965 DNA-DIRECTED RNA FT POLYMERASE II 23 KD POLYPEPTIDE (HUMAN); (337..416); 100% FT identity.~~(17258..17175) AA454915 zx79d10.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 809971 5' similar to FT gb:J04965 DNA-DIRECTED RNA POLYMERASE II 23 KD POLYPEPTIDE FT (HUMAN); (1..84); 100% identity.~ ~(17254..17175) W56537 FT zd16b06.r1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 340787 5' similar to gb:J04965 DNA-DIRECTED RNA FT POLYMERASE II 23 KD POLYPEPTIDE (HUMAN); (66..146); 99% FT identity.~~BLASTN similarity to AA779693 (338..421); match: FT 1, score: 1.1e-134; database searched: month.na; af43f06.s1 FT Soares total fetus Nb2HF8 9w Homo sapiens cDNA clone FT 1034435 3' similar to gb:J04965 DNA-DIRECTED RNA FT POLYMERASE~~Other overlapping EST matches:~AA755549" FT gene complement(1089485..1095314) FT /gene="POLR2E" FT /note="DNA-directed RNA polymerase II 23 KD polypeptide" FT CDS complement(join(1089485..1089550,1089883..1089961, FT 1090086..1090144,1090907..1090987,1091791..1091906, FT 1093903..1094077,1095258..1095314)) FT /codon_start=1 FT /gene="POLR2E" FT /product="RPB5_Human" FT /EC_number="2.7.7.6" FT /note="DNA-directed RNA Polymerase II 23 KD polypeptide" FT /protein_id="AAC03238.1" FT /translation="MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQSG FT DKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALI FT VVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARY FT KLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLVQ" FT misc_feature complement(1089883..1089961) FT /gene="POLR2E" FT /note="DDS similarity to overlapping FT ESTs:~~(17665..17587)AA583034 nn80e10.s1 NCI_CGAP_Co9 Homo FT sapiens cDNA clone IMAGE:1090218 similar to gb:J04965 FT DNA-DIRECTED RNA POLYMERASE II 23 KD POLYPEPTIDE (HUMAN); FT (259..336); 99% identity.~~(17651..17587) W56537 zd16b06.r1 FT Soares fetal heart NbHH19W Homo sapiens cDNA clone 340787 FT 5' similar to gb:J04965 DNA-DIRECTED RNA POLYMERASE II 23 FT KD POLYPEPTIDE (HUMAN); (1..65); 100% identity.~~Other FT overlapping EST matches:~AA779693, AA755549" FT misc_feature complement(1090086..1090144) FT /gene="POLR2E" FT /note="DDS similarity to overlapping ESTs:~(17848..17790) FT AA583034 nn80e10.s1 NCI_CGAP_Co9 Homo sapiens cDNA clone FT IMAGE:1090218 similar to gb:J04965 DNA-DIRECTED RNA FT POLYMERASE II 23 KD POLYPEPTIDE (HUMAN); (200..258); 100% FT identity.~~Other overlapping EST matches:~AA755549" FT repeat_region complement(1090407..1090464) FT /rpt_family="MER5A" FT repeat_region complement(1090531..1090716) FT /rpt_family="AluY" FT repeat_region complement(1090718..1090783) FT /rpt_family="MER5A" FT misc_feature complement(1090899..1091015) FT /gene="POLR2E" FT /note="BLASTN similarity to AA779693 (92..208); match: FT 0.85, score: 7.8e-37; database searched: month.na; FT af43f06.s1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 1034435 3' similar to gb:J04965 DNA-DIRECTED RNA FT POLYMERASE~~BLASTN similarity to AA757167 (91..207); match: FT 0.83, score: 5.4e-69; database searched: month.na; FT ah56a04.s1 Soares testis NHT Homo sapiens cDNA clone FT 1309614 3' similar to gb:J04965 DNA-DIRECTED RNA POLYMERASE FT II 23" FT misc_feature complement(1091791..1091909) FT /gene="POLR2E" FT /note="DDS similarity to AA583034 nn80e10.s1 NCI_CGAP_Co9 FT Homo sapiens cDNA clone IMAGE:1090218 similar to gb:J04965 FT DNA-DIRECTED RNA POLYMERASE II 23 KD POLYPEPTIDE (HUMAN); FT (1..118); 97% identity.~~Other overlapping EST FT matches:~AA755549, AA779693, AA757167" FT repeat_region 1092290..1092418 FT /rpt_family="AluSx" FT repeat_region 1092423..1092693 FT /rpt_family="AluY" FT repeat_region 1092717..1092901 FT /rpt_family="AluSx" FT repeat_region 1092903..1093204 FT /rpt_family="AluSx" FT misc_feature 1094157..1094311 FT /gene="POLR2E" FT /note="DDS similarity to T06048 EST03937 Homo sapiens cDNA FT clone HFBDN41. (31..184); 99% identity." FT repeat_region 1094398..1094554 FT /rpt_family="FRAM" FT misc_feature 1094564..1094857 FT /gene="POLR2E" FT /note="BLASTN similarity to Z55783 (20..314); match: 1, FT score: 1.5e-104; database searched: nt; H.sapiens CpG DNA, FT clone 64a11, reverse read cpg64a11.rt1a ." FT repeat_region complement(1095215..1095238) FT /rpt_family="GC_rich" FT misc_feature 1095255..1095598 FT /note="BLASTN similarity to AA789262 (100..441); match: FT 0.98, score: 7.5e-119; database searched: month.na; FT aj28a05.s1 Soares testis NHT Homo sapiens cDNA clone FT 1391600 3' similar to gb:J04965 DNA-DIRECTED RNA POLYMERASE FT II 23" FT misc_feature complement(1095567..1095763) FT /note="BLASTN similarity to Z65873 (26..222); match: 0.99, FT score: 8.8e-73; database searched: nt; H.sapiens CpG DNA, FT clone 64b6, forward read cpg64b6.ft1a ." FT repeat_region 1095770..1095853 FT /rpt_family="MIR" FT repeat_region 1096193..1096493 FT /rpt_family="AluY" FT repeat_region 1096652..1096939 FT /rpt_family="AluSg" FT repeat_region 1096947..1097008 FT /rpt_family="AluJo" FT repeat_region complement(1097097..1097393) FT /rpt_family="AluY" FT repeat_region 1097437..1097490 FT /rpt_family="AluJo" FT repeat_region complement(1097497..1097798) FT /rpt_family="AluSx" FT repeat_region 1097803..1098005 FT /rpt_family="AluJo" FT repeat_region complement(1098006..1098134) FT /rpt_family="LINE2" FT repeat_region 1098657..1098798 FT /rpt_family="MIR" FT repeat_region complement(1098824..1098940) FT /rpt_family="LINE2" FT repeat_region 1099235..1099294 FT /rpt_family="L1MB5" FT repeat_region 1099297..1099599 FT /rpt_family="AluSq" FT repeat_region 1099600..1099714 FT /rpt_family="L1MB5" FT repeat_region 1099748..1099906 FT /rpt_family="AluSg/x" FT repeat_region 1099908..1100225 FT /rpt_family="L1MB5" FT repeat_region 1100227..1100521 FT /rpt_family="AluSp" FT repeat_region 1100522..1100646 FT /rpt_family="L1MB5" FT repeat_region complement(1100648..1100941) FT /rpt_family="AluSg" FT repeat_region complement(1100942..1101076) FT /rpt_family="AluSq/x" FT repeat_region complement(1101083..1101376) FT /rpt_family="AluY" FT repeat_region 1102236..1102531 FT /rpt_family="AluSx" FT repeat_region 1103019..1103329 FT /rpt_family="AluSq" FT repeat_region 1103340..1103639 FT /rpt_family="AluJb" FT gene 1104043..1106571 FT /gene="GPx-4" FT /note="phospholipid hydroperoxide glutathione peroxidase" FT CDS join(1104043..1104126,1105185..1105279,1105365..1105509, FT 1105657..1105808,1106241..1106265,1106399..1106458, FT 1106539..1106571) FT /codon_start=1 FT /transl_except=(pos:1105402..1105404,aa:OTHER) FT /gene="GPx-4" FT /product="GSHH_HUMAN" FT /EC_number="1.11.1.9" FT /note="PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE; FT Residue 73 is selenocysteine" FT /protein_id="AAC03239.1" FT /translation="MSLGRLCRLLKPALLCGALAAPGLAGTMCASRDDWRCARSMHEFS FT AKDIDGHMVNLDKYRGFVCIVTNVASQXGKTEVNYTQLVDLHARYAECGLRILAFPCNQ FT FGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKW FT NFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF" FT misc_feature 1104084..1104106 FT /gene="GPx-4" FT /note="BLASTN similarity to D28659 (1..23); match: 0.86, FT score: 1.9e-52; database searched: est; Mouse embryonal FT carcinoma F9 cell cDNA, 88A11" FT repeat_region complement(1104418..1104614) FT /rpt_family="GC_rich" FT repeat_region 1104762..1104865 FT /rpt_family="(CGG)n" FT misc_feature 1104837..1104928 FT /gene="GPx-4" FT /note="DDS similarity to AA587357 nn78h11.s1 NCI_CGAP_Co9 FT Homo sapiens cDNA clone IMAGE:1090053 similar to gb:X71973 FT PHOSPHOLIPID HYDROPEROXIDE GLUTHATIONE PEROXIDASE (HUMAN); FT (1..90); 98% identity.~" FT misc_feature 1105185..1105279 FT /gene="GPx-4" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to AA587357 nn78h11.s1 NCI_CGAP_Co9 Homo sapiens FT cDNA clone IMAGE:1090053 similar to gb:X71973 PHOSPHOLIPID FT HYDROPEROXIDE GLUTHATIONE PEROXIDASE (HUMAN); (91..183); FT 98% identity.~~Other EST matches:~D21771, D28659~" FT misc_feature 1105365..1105509 FT /gene="GPx-4" FT /note="DDS similarity to overlapping ESTs:~(33069..33213) FT AA587357 nn78h11.s1 NCI_CGAP_Co9 Homo sapiens cDNA clone FT IMAGE:1090053 similar to gb:X71973 PHOSPHOLIPID FT HYDROPEROXIDE GLUTHATIONE PEROXIDASE (HUMAN); (184..328); FT 100% identity.~~(33070..33213) AA507435 nh74c11.s1 FT NCI_CGAP_Br1.1 Homo sapiens cDNA clone IMAGE:964244 similar FT to gb:X71973 PHOSPHOLIPID HYDROPEROXIDE GLUTHATIONE FT PEROXIDASE (HUMAN); (617..475); 98% FT identity.~~(33078..33213) N31188 yx64g02.r1 Homo sapiens FT cDNA clone 266546 5' similar to gb:X71973 PHOSPHOLIPID FT HYDROPEROXIDE GLUTHATIONE PEROXIDASE (HUMAN); (1..134); 98% FT identity.~~(33069..33108) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: good, score: FT 66.000~~Other EST matches:~D21771, D28659, AA455197, FT AA448389" FT misc_feature 1105657..1105808 FT /gene="GPx-4" FT /note="DDS similarity to overlapping ESTs:~AA587357 FT nn78h11.s1 NCI_CGAP_Co9 Homo sapiens cDNA clone FT IMAGE:1090053 similar to gb:X71973 PHOSPHOLIPID FT HYDROPEROXIDE GLUTHATIONE PEROXIDASE (HUMAN); (329..480); FT 100% identity.~~AA507435 nh74c11.s1 NCI_CGAP_Br1.1 Homo FT sapiens cDNA clone IMAGE:964244 similar to gb:X71973 FT PHOSPHOLIPID HYDROPEROXIDE GLUTHATIONE PEROXIDASE (HUMAN); FT (474..324); 97% identity.~~(33361..33512) N31188 yx64g02.r1 FT Homo sapiens cDNA clone 266546 5' similar to gb:X71973 FT PHOSPHOLIPID HYDROPEROXIDE GLUTHATIONE PEROXIDASE (HUMAN); FT (135..286); 99% identity.~~(33361..33546) predicted exon, FT program: grail2exons_human_1.3, frame: 0, quality: FT excellent, score: 100.000~~Other overlapping EST FT matches:~D21771, T40364, AA455197, AA448389" FT misc_feature 1106241..1106265 FT /gene="GPx-4" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 67.000~~DDS similarity to FT overlapping ESTs:~AA587357 nn78h11.s1 NCI_CGAP_Co9 Homo FT sapiens cDNA clone IMAGE:1090053 similar to gb:X71973 FT PHOSPHOLIPID HYDROPEROXIDE GLUTHATIONE PEROXIDASE (HUMAN); FT (481..505); 92% identity.~~AA507435 nh74c11.s1 FT NCI_CGAP_Br1.1 Homo sapiens cDNA clone IMAGE:964244 similar FT to gb:X71973 PHOSPHOLIPID HYDROPEROXIDE GLUTHATIONE FT PEROXIDASE (HUMAN); (323..299); 100% identity.~~N31188 FT yx64g02.r1 Homo sapiens cDNA clone 266546 5' similar to FT gb:X71973 PHOSPHOLIPID HYDROPEROXIDE GLUTHATIONE PEROXIDASE FT (HUMAN); (287..311); 100% identity.~~Other overlapping FT ESTs:~AA455197, AA448389" FT misc_feature 1106397..1106460 FT /gene="GPx-4" FT /note="BLASTN similarity to T40364 (91..154); match: 1, FT score: 3.2e-76; database searched: est; ya32h07.r3 Homo FT sapiens cDNA clone 62365 5' similar to SP:GSHH_HUMAN P36969 FT PHOSPHOLIPID HYDROPEROXIDE GLUTHATIONE" FT misc_feature 1106399..1106458 FT /gene="GPx-4" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA587357 nn78h11.s1 FT NCI_CGAP_Co9 Homo sapiens cDNA clone IMAGE:1090053 similar FT to gb:X71973 PHOSPHOLIPID HYDROPEROXIDE GLUTHATIONE FT PEROXIDASE (HUMAN); (506..565); 92% identity.~~AA507435 FT nh74c11.s1 NCI_CGAP_Br1.1 Homo sapiens cDNA clone FT IMAGE:964244 similar to gb:X71973 PHOSPHOLIPID FT HYDROPEROXIDE GLUTHATIONE PEROXIDASE (HUMAN); (298..239); FT 100% identity.~~N31188 yx64g02.r1 Homo sapiens cDNA clone FT 266546 5' similar to gb:X71973 PHOSPHOLIPID HYDROPEROXIDE FT GLUTHATIONE PEROXIDASE (HUMAN); (312..371); 100% FT identity.~~Other overlapping EST matches:~T40364, AA455197, FT AA448389" FT misc_feature 1106539..1106777 FT /note="DDS similarity to overlapping ESTs:~(34243..34481) FT AA507435 nh74c11.s1 NCI_CGAP_Br1.1 Homo sapiens cDNA clone FT IMAGE:964244 similar to gb:X71973 PHOSPHOLIPID FT HYDROPEROXIDE GLUTHATIONE PEROXIDASE (HUMAN); (238..1); 98% FT identity.~~(34243..34384) N31188 yx64g02.r1 Homo sapiens FT cDNA clone 266546 5' similar to gb:X71973 PHOSPHOLIPID FT HYDROPEROXIDE GLUTHATIONE PEROXIDASE (HUMAN); (372..515); FT 96% identity.~~Other overlapping EST matches: ~T40364, FT AA455197, AA448389" FT misc_feature 1107635..1108206 FT /note="DDS similarity to overlapping ESTs: (1860..2170) FT AA454577 zx74g11.s1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 809540 3'; Score: 605 Identity: 308/310 FT (99%).~(2214..1863) AA456471 zx74g11.r1 Soares ovary tumor FT NbHOT Homo sapiens cDNA clone 809540 5'; Score: 665 FT Identity: 346/355 (97%).~(1861..2276) AA722975 zg89a08.s1 FT Soares fetal heart NbHH19W Homo sapiens cDNA clone 409718 FT 3'; Score: 795 Identity: 408/415 (98%).~(1866..2300) FT AA444008 zv44h09.s1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 756545 3'; Score: 814 Identity: 426/431 FT (98%).~(2431..2017) AA444037 zv44h09.r1 Soares ovary tumor FT NbHOT Homo sapiens cDNA clone 756545 5'; Score: 803 FT Identity: 412/412 (100%).~Additional EST matches: R96945, FT T30158, Z25344, AA485597, AA456804, Z25344, AA954685" FT CDS complement(join(1108219..1108703,1108778..1108968, FT 1109134..1109210,1109291..1109422,1109505..1109597, FT 1109682..1109776,1110711..1110887,1111018..1111092, FT 1111505..1111613,1111995..1112066,1112188..1112300, FT 1112401..1112536,1112817..1112948,1113534..1113703, FT 1114230..1114370,1116020..1116102,1116828..1116925, FT 1117322..1117498,1119010..1119163,1119515..1119620, FT 1119905..1120022,1122138..1122281,1122413..1122557, FT 1122657..1122790,1122893..1123044,1123533..1123638, FT 1123941..1124088,1127523..1127763,1128181..1128286, FT 1132089..1132133)) FT /codon_start=1 FT /product="R31180_1" FT /note="Putative human homolog of Drosophila Sno protein; FT Hypothetical human protein constructed solely from GRAIL FT predictions and BLASTX similarity to Drosophila Sno FT protein. R31180_1 is 59% identical to Drosophila FT melanogaster Sno protein (Strawberry Notch gene product; FT Notch pathway component; nuclear protein), and 54% FT identical to Caenorhabditis elegans F20H11.2 gene product; FT Splice junction occurs at 21,989. Translation of ORF with FT this splice junction using GRAIL generates a 1,384 residue FT hypothetical protein. However, SEQUIN-derived translation FT from same sequence is off by 1 base, requiring the use of FT non-consensus splice junction at 21,988 to generate same FT ORF" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC28919.1" FT /translation="MSQLQLWLQFEALNKGMAPGSPQTRAAQSSCSIAALQVLQKSDAV FT LRGPEDSSYFEDFSNISIFSSSVDSLSDIVDTPDFLPADSLNQVSTIWDDNPAPSTHDK FT VSAPGAPSQPRPTSVASPARDPHGPVRLRGPTSCDLSRLARADILLPFQLFQLSRPFAG FT FEDFLPSHSTPLLVSYQEQSVQSQPEEEDEAEEEEAEELGHTETYADYVPSKSKIGKQH FT PDRVVETSTLSSVPPPDITYTLALPSDSGALSALQLEAITYACQQHEVLLPSGQRAGFL FT IGDGAGVGKGRTVAGVILENHLRGRKKALWFSVSNDLKYDAERDLRDIEATGIAVHALS FT KVGAVLGKVGGKVGTVPCKIKYGDTTTSEGVLFATYSALIGESQAGGQHRTRLRQILDW FT CGEAFEGVIVFDECHKAKNAGSTKMGKAVLDLQNKLPLARVVYASATGASEPRNMIYMS FT RLGIWGEGTPFRNFEEFLHAIEKRGVGAMEIVAMDMKVSGMYIARQLSFSGVTFRIEEI FT PLAPAFECVYNRAALLWAEALNVFQQAADWIGLESRKSLWGQFWSAHQRFFKYLCIAAK FT VRRLVELAREELARDKCVVIGLQSTGEARTREVLGENDGHLNCFVSAAEGVFLSLIQKH FT FPSTKRKRDRGAGSKRKPGVIRISDDSSTESDPGLDSDFNSSPESLVDDDVVIVDAVGL FT PSDDRGPLCLLQRDPHGPGVLERVERLKQDLLDKVRRLGRELPVNTLDELIDQLGGPQR FT VAEMTGRKGRVVSRPDGTVAFESRAEQGLSIDHVNLREKQRFMSGEKLVAIISEASSSG FT VSLQADRRVQNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVSAPEYVFLISELAGERR FT FASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTRALHCVLTTILSQTENKVPV FT PQGYPGGVPTFFRDMKQGLLSVGIGGRESRNGCLDVEKDCSITKFLNRILGLEVHKQNA FT LFQYFSDTFDHLIEMDKREGKYDMGILGEHRCRGVVWVDLAPGIEEIYEESQQVFLAPG FT HPQDGQVVFYKISVDRGLKWEDAFAKSLALTGPYDGFYLSYKVRGNKPSCLLAEQNRGQ FT FFTVYKPNIGRQSQLEALDSLRRKFHRVTAEEAKEPWESGYALSLTHCSHSAWNRHCRL FT AQEGKDCLQGLRLRHHYMLCGALLRVWGRIAAVMADVSSSSYLQIVRLKTKDRKKQVGI FT KIPEGCVRRVLQELRLMDADVKRRQAPALGCPAPPAPRPLALPCGPGEVLDLTYSPPAE FT AFPPPPHFSFPAPLSLDAGPGVVPLGTPDAQADPAALAHQGCDINFKEVLEDMLRSLHA FT GPPSEGALGEGAGAGGAAGGGPERQSVIQFSPPFPGAQAPL" FT misc_feature complement(1108267..1108703) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 74.000" FT repeat_region complement(1108286..1108330) FT /rpt_family="(CGGG)n" FT repeat_region 1108407..1108492 FT /rpt_family="GC_rich" FT repeat_region complement(1108559..1108624) FT /rpt_family="GC_rich" FT repeat_region complement(1108727..1108771) FT /rpt_family="GC_rich" FT misc_feature complement(1108782..1108968) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 94.000" FT misc_feature complement(1109134..1109210) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(1109291..1109422) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(1109329..1109597) FT /note="DDS similarity to AA977476 on60a12.s1 FT Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1561054 FT 3' similar to WP:F20H11.2 CE09511 ; (260..1); 96% FT identity." FT repeat_region 1109442..1109472 FT /rpt_family="GC_rich" FT misc_feature complement(1109505..1109597) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 99.000" FT misc_feature complement(1109682..1109776) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 89.000~DDS similarity FT to AA977476 on60a12.s1 Soares_NFL_T_GBC_S1 Homo sapiens FT cDNA clone IMAGE:1561054 3' similar to WP:F20H11.2 CE09511 FT ; (355..261); 99% identity." FT misc_feature complement(1110709..1110887) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature complement(1110744..1110822) FT /note="DDS similarity to AA977476 on60a12.s1 FT Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1561054 FT 3' similar to WP:F20H11.2 CE09511 ; (434..356); 100% FT identity." FT misc_feature complement(1111018..1111092) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(1111505..1111613) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(1111995..1112066) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(1112188..1112300) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 95.000" FT repeat_region 1112322..1112394 FT /rpt_family="GC_rich" FT misc_feature complement(1112401..1112536) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(1112817..1112948) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(1113530..1113683) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 1113957..1114069 FT /rpt_family="MIR" FT misc_feature complement(1114230..1114370) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 99.000" FT repeat_region complement(1114641..1114930) FT /rpt_family="AluSc" FT misc_feature complement(1114812..1114859) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 54.000" FT repeat_region complement(1114931..1115231) FT /rpt_family="AluSx" FT repeat_region complement(1115236..1115539) FT /rpt_family="AluSq" FT misc_feature complement(1116020..1116102) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 65.000" FT misc_feature complement(1116828..1116925) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(1117322..1117498) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 85.000" FT repeat_region 1117811..1118002 FT /rpt_family="MER20" FT repeat_region 1118053..1118357 FT /rpt_family="AluSp" FT repeat_region 1118587..1118888 FT /rpt_family="AluSx" FT misc_feature complement(1118979..1119163) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature complement(1119515..1119620) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 90.000" FT misc_feature complement(1119905..1120022) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 1120185..1120210 FT /rpt_family="GC_rich" FT repeat_region complement(1120364..1120666) FT /rpt_family="AluSx" FT repeat_region complement(1120892..1121187) FT /rpt_family="AluSg" FT misc_feature complement(1122163..1122281) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 96.000" FT misc_feature complement(1122394..1122557) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region complement(1122560..1122642) FT /rpt_family="GC_rich" FT misc_feature complement(1122657..1122790) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 79.000" FT misc_feature complement(1122893..1123044) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 95.000" FT misc_feature complement(1123533..1123638) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 87.000" FT repeat_region complement(1123576..1123614) FT /rpt_family="(GGA)n" FT repeat_region 1123763..1123823 FT /rpt_family="MIR" FT misc_feature complement(1123941..1124088) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 61.000" FT repeat_region 1125073..1125377 FT /rpt_family="AluSg" FT repeat_region 1125388..1125692 FT /rpt_family="AluSp" FT repeat_region 1125722..1126012 FT /rpt_family="AluJb" FT repeat_region complement(1127301..1127408) FT /rpt_family="MER20" FT misc_feature complement(1127561..1127764) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 97.000" FT repeat_region complement(1127900..1128104) FT /rpt_family="AluSx" FT repeat_region 1128113..1128155 FT /rpt_family="Alu" FT misc_feature complement(1128181..1128286) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 65.000" FT repeat_region complement(1128392..1128691) FT /rpt_family="AluSx" FT repeat_region 1128984..1129285 FT /rpt_family="AluSx" FT repeat_region 1129950..1130348 FT /rpt_family="L1MC3" FT repeat_region 1130377..1130506 FT /rpt_family="AluJo/FRAM" FT repeat_region 1130512..1130808 FT /rpt_family="AluJb" FT misc_feature complement(1132089..1132133) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 74.000" FT repeat_region complement(1132963..1132989) FT /rpt_family="GC_rich" FT misc_feature complement(1133071..1133110) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 93.000" FT repeat_region 1134434..1134745 FT /rpt_family="L1MB7" FT repeat_region 1134765..1135064 FT /rpt_family="AluSg" FT repeat_region 1135078..1135371 FT /rpt_family="AluJo" FT repeat_region 1135916..1136307 FT /rpt_family="MLT1B" FT repeat_region complement(1136619..1136668) FT /rpt_family="(GA)n" FT repeat_region 1137275..1137419 FT /rpt_family="GC_rich" FT repeat_region 1138506..1138623 FT /rpt_family="L1MB6" FT misc_feature 1138707..1139120 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 51.000" FT repeat_region 1139108..1139509 FT /rpt_family="L1MB6" FT repeat_region 1139512..1139806 FT /rpt_family="AluSx" FT repeat_region 1139809..1139964 FT /rpt_family="AluSp" FT repeat_region 1139967..1140012 FT /rpt_family="(GAAA)n" FT repeat_region 1140017..1140313 FT /rpt_family="AluY" FT misc_feature 1140498..1140600 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 53.000" FT repeat_region complement(1141210..1141512) FT /rpt_family="AluSx" FT repeat_region complement(1141520..1141571) FT /rpt_family="AluJo" FT repeat_region complement(1141696..1141921) FT /rpt_family="AluJo" FT repeat_region complement(1142122..1142272) FT /rpt_family="(GGGA)n" FT repeat_region 1142449..1142687 FT /rpt_family="AluSx" FT repeat_region 1142690..1142974 FT /rpt_family="AluSq" FT repeat_region 1143205..1143490 FT /rpt_family="AluJb" FT repeat_region complement(1143503..1143720) FT /rpt_family="MLT1D" FT repeat_region 1144552..1144671 FT /rpt_family="(GA)n" FT repeat_region 1144773..1144899 FT /rpt_family="(CAGA)n" FT repeat_region 1144910..1145049 FT /rpt_family="(GA)n" FT repeat_region 1145052..1145170 FT /rpt_family="(GA)n" FT repeat_region 1145184..1145245 FT /rpt_family="AluY" FT misc_feature 1164790..1164967 FT /note="NOTE: Shatter libraries failed to resolve the FT dinucleotide repeat 15628-15805. Unsure number of repeat FT copies 15628-15805. Forced join 15663." FT mRNA join(<1226453..1226662,1227592..1228093) FT /gene="STK11" FT /product="STK11 mRNA, partial CDS and 3'UTR" FT CDS <1226453..1226646 FT /codon_start=3 FT /gene="STK11" FT /product="STK11 [amino acids 371-433]" FT /note="Serine/threonine kinase 11" FT /protein_id="AAF97257.1" FT /translation="QVPEEEASHNGQRRGLPKAVCMNGTEAAQLSTKSRAEGRAPNPAR FT KACSASSKIRRLSACKQQ" FT misc_feature 1227584..1228019 FT /note="DDS similarity to overlapping ESTs: (972..1407) FT AA436398 zv44a08.s1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 756470 3' similar to SW:VNUA_PRVKA P33485 FT PROBABLE NUCLEAR ANTIGEN. ; (433..1); 91% FT identity.~(1359..1050) AA576906 nm73e05.s1 NCI_CGAP_Co9 FT Homo sapiens cDNA clone IMAGE:1073888. Score: 513 Identity: FT 291/305 (95%).~(1407..1098) AA292429 zt28g10.s1 Soares FT ovary tumor NbHOT Homo sapiens cDNA clone 714498 3'. Score: FT 491 Identity: 290/299 (96%).~(1379..1107) AA642427 FT ns27d07.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:1184845. Score: 482 Identity: 265/269 FT (98%).~(1406..1144) AA557240 nl75d11.s1 NCI_CGAP_Br2 Homo FT sapiens cDNA clone IMAGE:1056501. Score: 447 Identity: FT 250/260 (96%)." FT repeat_region 1227911..1227942 FT /rpt_family="GC_rich" FT repeat_region complement(1228020..1228069) FT /rpt_family="POLY_A" FT misc_feature 1228162..1228468 FT /note="DDS similarity to overlapping ESTs: (1550..1799) FT AA652409 ns57d10.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1187731. Score: 478 Identity: 247/248 FT (99%).~(1856..1674) W52572 zc45h09.s1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 325313 3' FT (192..11); 99% identity.~(1675..1793) AA568599 nm21c12.s1 FT NCI_CGAP_Co10 Homo sapiens cDNA clone IMAGE:1060822. Score: FT 234 Identity: 118/119 (99%)." FT repeat_region complement(1228521..1228562) FT /rpt_family="GC_rich" FT repeat_region 1228710..1228764 FT /rpt_family="GC_rich" FT repeat_region 1229003..1229103 FT /rpt_family="SUBTEL_sat" FT misc_feature complement(1229178..1230141) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 73.000" FT CDS complement(join(1229178..1230141,1231100..1231274, FT 1233425..1233635,1234190..1234330,1234570..1234826, FT 1235007..1235144,1235500..1235564,1235778..1235917, FT 1235995..1236081)) FT /codon_start=1 FT /product="R29144_1" FT /note="Hypothetical 75.8 kDa human protein" FT /protein_id="AAC04305.1" FT /translation="MATAATTTTTTTATVALTTSWDNATGRPTAEPDPILDNYVLLVVV FT MSLFVGGTLVVLSGVLLLCKRCWDVHQRLNRAMEEAEKTTTTYLDNGTHPAQDPDFRGE FT DPECQDAETERFLSTSSTGRRVSFNEAALFEQSRKTQDKGRQGGWQSTAAGASGMGGGR FT ALMARCCRRYTLTEGDFHHLKNARLTHLHLPPLKIVTIHECDSGEASSATTPHPATSPK FT ATLAIFQPPGKALTGRSVGPSSALPGDPYNSAAGATDFAEISPSASSDSGEGTSLDAGT FT RSTKAGGPGAAAGPGEAGPGSGAGTVLQFLTRLRRHASLDGASPYFKVKKWKLEPSQRA FT ASLDTRGSPKRHHFQRQRAASESTEQEEGDAPQEDFIQYIARAGDAVAFPHPRPFLASP FT PPALGRLEAAEAAGGASPDSPPERGAGSAGPEQQQPPLEPDAERDAGPEQAQTSYRDLW FT SLRASLELHAAASDHSSSGNDRDSVRSGDSSGSGSGGAAPAFPPPSPPAPRPKDGEARR FT LLQMDSGYASIEGRGAGDDTEPPAAPARPRSPRAWPRRPRRDYSIDEKTDALFHEFLRH FT DPHFDDTPAAARHRARAHPHARKQWQRGRQHSDPGARAAPALAGTPAPPAGAARPARAP FT LRRGDSVDGPPDGRTLGGAGDDPAIPVIEEEPGGGGCPGSGLCVLPSGSVLDKLAAGLD FT ERLFPPRLAEPVVATPALVAAAPTSPDHSPA" FT repeat_region 1229327..1229529 FT /rpt_family="GC_rich" FT repeat_region 1229682..1229741 FT /rpt_family="(CGGG)n" FT repeat_region complement(1229804..1229878) FT /rpt_family="GC_rich" FT misc_feature complement(1231100..1231274) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 80.000" FT misc_feature complement(1231196..1231274) FT /note="DDS similarity to overlapping ESTs: (4584..4662) FT W52572 zc45h09.s1 Soares senescent fibroblasts NbHSF Homo FT sapiens cDNA clone 325313 3'; (271..193); 96% FT identity.~(4662..4533) W52571 zc45h09.r1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 325313 5' FT (253..393); 67% identity. " FT repeat_region complement(1231785..1231813) FT /rpt_family="MIR" FT repeat_region complement(1232734..1232891) FT /rpt_family="MER58B" FT misc_feature complement(1233425..1233635) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 74.000~DDS similarity to FT overlapping ESTs: (7023..6813) W52571 zc45h09.r1 Soares FT senescent fibroblasts NbHSF Homo sapiens cDNA clone 325313 FT 5' (45..252); 90% identity.~(6991..6813) W52572 zc45h09.s1 FT Soares senescent fibroblasts NbHSF Homo sapiens cDNA clone FT 325313 3'; (457..272); 90% identity." FT misc_feature complement(1234190..1234330) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 87.000~(7621..7578) FT DDS similarity to W52571 zc45h09.r1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 325313 5' FT (1..44); 98% identity." FT misc_feature complement(1234570..1234826) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 77.000" FT misc_feature complement(1235000..1235144) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(1235169..1235278) FT /rpt_family="GC_rich" FT repeat_region 1235400..1235488 FT /rpt_family="(CAGA)n" FT misc_feature complement(1235500..1235564) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 98.000" FT misc_feature complement(1235778..1235913) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(1235834..1235887) FT /rpt_family="(TGG)n" FT misc_feature complement(1235995..1236081) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 88.000" FT repeat_region 1236041..1236092 FT /rpt_family="(TGG)n" FT repeat_region 1236773..1236884 FT /rpt_family="(CGG)n" FT repeat_region complement(1237721..1237751) FT /rpt_family="GC_rich" FT repeat_region 1237781..1237855 FT /rpt_family="(CGG)n" FT repeat_region 1237874..1238141 FT /rpt_family="GC_rich" FT repeat_region complement(1239176..1239477) FT /rpt_family="AluJb" FT repeat_region complement(1240239..1240296) FT /rpt_family="GC_rich" FT repeat_region complement(1240671..1240990) FT /rpt_family="AluSx" FT repeat_region complement(1241051..1241319) FT /rpt_family="AluJo" FT repeat_region complement(1241391..1241531) FT /rpt_family="AluJb" FT mRNA join(1241767..1241990,1242455..1242608,1244096..1244184, FT 1244314..1244825) FT /gene="ATP5D" FT /product="ATP5D" FT repeat_region complement(1241773..1241945) FT /rpt_family="(CGG)n" FT misc_feature 1241821..1241990 FT /gene="ATP5D" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 66.000~DDS similarity to FT overlapping ESTs: (15340..15378) AA320717 EST23106 Adipose FT tissue, white II Homo sapiens cDNA 5' end similar to FT similar to ATP synthase, delta subunit, mitochondrial FT (1..39); 100% identity." FT CDS join(1241850..1241990,1242455..1242608,1244096..1244184, FT 1244314..1244436) FT /codon_start=1 FT /gene="ATP5D" FT /product="ATPD_HUMAN" FT /EC_number="3.6.1.34" FT /note="SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR" FT /protein_id="AAC04304.1" FT /translation="MLPAALLRRPGLGRLVRHARAYAEAAAAPAAASGPNQMSFTFASP FT TQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSI FT AVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQIRIEANEAL FT VKALE" FT repeat_region complement(1241994..1242100) FT /rpt_family="GC_rich" FT repeat_region 1242397..1242428 FT /rpt_family="GC_rich" FT misc_feature 1242455..1242608 FT /gene="ATP5D" FT /note="DDS similarity to overlapping ESTs: (15843..15996) FT AA320717 EST23106 Adipose tissue, white II Homo sapiens FT cDNA 5' end similar to similar to ATP synthase, delta FT subunit, mitochondrial (40..193); 97% FT identity.~(15850..15996) N30389 yw96e11.s1 Homo sapiens FT cDNA clone 260108 3' similar to gb:X63422 ATP SYNTHASE FT DELTA CHAIN, MITOCHONDRIAL PRECURSOR (HUMAN); (442..299); FT 90% identity.~(15891..15996) AA595581 nk92c01.s1 FT NCI_CGAP_Co11 Homo sapiens cDNA clone IMAGE:1028256 similar FT to gb:X63422 ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL FT PRECURSOR (HUMAN); (426..322); 94% identity.~(15843..16050) FT predicted exon, program: grail2exons_human_1.3, frame: 2, FT quality: excellent, score: 100.000" FT repeat_region 1242707..1242840 FT /rpt_family="AluSq/x" FT repeat_region 1242844..1243092 FT /rpt_family="AluY" FT repeat_region 1243237..1243380 FT /rpt_family="AluJo" FT repeat_region 1243382..1243662 FT /rpt_family="AluJb" FT misc_feature 1244096..1244184 FT /gene="ATP5D" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~DDS similarity FT to overlapping ESTs: (17484..17572) N30389 yw96e11.s1 Homo FT sapiens cDNA clone 260108 3' similar to gb:X63422 ATP FT SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR (HUMAN); FT (298..211); 99% identity.~(17484..17572) AA595581 FT nk92c01.s1 NCI_CGAP_Co11 Homo sapiens cDNA clone FT IMAGE:1028256 similar to gb:X63422 ATP SYNTHASE DELTA FT CHAIN, MITOCHONDRIAL PRECURSOR (HUMAN); (321..234); 100% FT identical.~(17484..17559) AA320717 EST23106 Adipose tissue, FT white II Homo sapiens cDNA 5' end similar to similar to ATP FT synthase, delta subunit, mitochondrial (194..269); 96% FT identity." FT misc_feature 1244314..1244439 FT /gene="ATP5D" FT /note="DDS similarity to overlapping ESTs: (17702..17827) FT N30389 yw96e11.s1 Homo sapiens cDNA clone 260108 3' similar FT to gb:X63422 ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL FT PRECURSOR (HUMAN); (210..89); 96% identity.~(17702..17827) FT AA595581 nk92c01.s1 NCI_CGAP_Co11 Homo sapiens cDNA clone FT IMAGE:1028256 similar to gb:X63422 ATP SYNTHASE DELTA FT CHAIN, MITOCHONDRIAL PRECURSOR (HUMAN); (232..107); 100% FT identity. ~(17702..17820) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 100.000" FT misc_feature complement(1244343..1244823) FT /note="DDS similarity to overlapping ESTs: (18211..17731) FT AA570123 ne57f10.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:901483 similar to gb:X63422 ATP SYNTHASE DELTA CHAIN, FT MITOCHONDRIAL PRECURSOR (HUMAN); Score: 838 Identity: FT 458/477 (96%).~(18212..17780) AA588495 no25h05.s1 FT NCI_CGAP_Pr22 Homo sapiens cDNA clone IMAGE:1101753 similar FT to gb:X63422 ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL FT PRECURSOR (HUMAN); Score: 778 Identity: 423/439 (96%)." FT misc_feature 1244736..1244823 FT /gene="ATP5D" FT /note="DDS similarity to overlapping ESTs: (18124..18211) FT N30389 yw96e11.s1 Homo sapiens cDNA clone 260108 3' similar FT to gb:X63422 ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL FT PRECURSOR (HUMAN); (88..1); 100% identity.~(18124..18212) FT AA595581 nk92c01.s1 NCI_CGAP_Co11 Homo sapiens cDNA clone FT IMAGE:1028256 similar to gb:X63422 ATP SYNTHASE DELTA FT CHAIN, MITOCHONDRIAL PRECURSOR (HUMAN); (106..18); 100% FT identity. " FT misc_feature 1246227..1246268 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 64.000" FT repeat_region complement(1246828..1247127) FT /rpt_family="AluSp" FT repeat_region complement(1247132..1247431) FT /rpt_family="AluSg" FT repeat_region 1247840..1247891 FT /rpt_family="MIR" FT repeat_region complement(1247980..1248052) FT /rpt_family="MIR" FT repeat_region complement(1248490..1248523) FT /rpt_family="(CGGG)n" FT repeat_region 1249187..1249271 FT /rpt_family="GC_rich" FT repeat_region 1249594..1249799 FT /rpt_family="GC_rich" FT repeat_region complement(1250010..1250040) FT /rpt_family="GC_rich" FT repeat_region complement(1250255..1250385) FT /rpt_family="GC_rich" FT misc_feature 1250296..1250528 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 69.000~DDS similarity to FT overlapping ESTs: (23854..23916) AA236856 zs01c04.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:683910 3'; FT (350..288); 100% identity. " FT repeat_region complement(1250538..1250706) FT /rpt_family="GC_rich" FT misc_feature 1251164..1251441 FT /note="DDS similarity to H93433 ys76d11.s1 Homo sapiens FT cDNA clone 220725 3'. Score: 511 Identity: 268/277 (96%)." FT misc_feature 1251561..1251648 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 85.000~DDS similarity FT to overlapping ESTs: (24949..25036) AA236856 zs01c04.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:683910 3' FT (287..200); 100% identity. " FT misc_feature 1251838..1251900 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 85.000~DDS similarity FT to overlapping ESTs: (25226..25288) AA236856 zs01c04.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:683910 3'; FT (199..137); 97% identity.~(25226..25288) AA421908 FT zv28f04.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 754975 5'; (1..67); 86% identity.~(25257..25288) AA436427 FT zv44f06.s1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 756515 3'; ( 167..136); 100% identity. " FT misc_feature 1254166..1254477 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 61.000~DDS similarity to FT overlapping ESTs: (27554..27690) AA236856 zs01c04.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:683910 3'; FT (136..1); 95% identity.~(27554..27690) AA436427 zv44f06.s1 FT Soares ovary tumor NbHOT Homo sapiens cDNA clone 756515 3'; FT (135..1); 98% identity.~ (27554..27680) AA421908 zv28f04.r1 FT Soares ovary tumor NbHOT Homo sapiens cDNA clone 754975 5'; FT (68..194); 100% identity." FT misc_feature complement(1254899..1255085) FT /note="DDS similarity to AA644454 zu85f02.s1 Soares testis FT NHT Homo sapiens cDNA clone 744795 3'; (157..336); 91% FT identity." FT misc_feature 1255409..1255693 FT /note="(28809..29081) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 75.000~DDS similarity to overlapping ESTs: (29069..28797) FT AA080023 mn01f03.r1 Stratagene mouse heart (#937316) Mus FT musculus cDNA clone 536669 5'; (396..124); 85% FT identity.~(28842..29081) AA483309 ne39d07.s1 NCI_CGAP_Co3 FT Homo sapiens cDNA clone IMAGE:899725; (1..239); 98% FT identity. ~(28898..29081) R40087 yf70g05.s1 Homo sapiens FT cDNA clone 27671 3'; (1..186); 96% identity. " FT repeat_region 1256201..1256498 FT /rpt_family="AluY" FT repeat_region complement(1256630..1256839) FT /rpt_family="AluJo" FT misc_feature 1256994..1257894 FT /note="(30382..30650) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 91.000~DDS similarity to overlapping ESTs: (30382..30789) FT AA483309 ne39d07.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:899725; (240..658); 86% identity.~(30822..31282) FT AA478423 zu46e02.s1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 741050 3'; Score: 918 Identity: 460/461 FT (99%).~(30953..31244) D61634|HUM425C04B Human fetal brain FT cDNA 5'-end GEN-425C04. Score: 563 Identity: 288/291 FT (98%)." FT repeat_region 1257136..1257182 FT /rpt_family="(CGG)n" FT repeat_region complement(1257393..1257435) FT /rpt_family="(GAAAA)n" FT repeat_region complement(1257479..1257548) FT /rpt_family="(GGA)n" FT repeat_region complement(1257869..1257929) FT /rpt_family="(GAAAA)n" FT misc_feature 1258093..1259148 FT /note="DDS similarity to overlapping ESTs: (31481..31798) FT AA642395 ns26h12.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:1184807. Score: 594 Identity: 319/326 FT (97%).~(31941..31498) AA641940 ns18c01.r1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:1183968. Score: 845 Identity: FT 435/445 (97%).~(32179..31661) AA621869 nq23e04.s1 FT NCI_CGAP_Co10 Homo sapiens cDNA clone IMAGE:1144734. Score: FT 965 Identity: 501/514 (97%).~(32186..31716) AA662479 FT nu95e07.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1218468. Score: 925 Identity: 468/470 FT (99%).~(32536..32046) AA534574 nf77d05.s1 NCI_CGAP_Co3 Homo FT sapiens cDNA clone IMAGE:925929. Score: 942 Identity: FT 484/497 (97%)." FT repeat_region 1258792..1258831 FT /rpt_family="POLY_A" FT repeat_region complement(1260043..1260096) FT /rpt_family="MIR" FT misc_feature complement(1260312..1260498) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 59.000" FT repeat_region complement(1260918..1260967) FT /rpt_family="GC_rich" FT repeat_region complement(1261437..1261557) FT /rpt_family="LINE2" FT repeat_region complement(1262637..1262757) FT /rpt_family="(GGGA)n" FT repeat_region complement(1263616..1263919) FT /rpt_family="AluSx" FT repeat_region complement(1263921..1264056) FT /rpt_family="AluSq/x" FT repeat_region complement(1264070..1264345) FT /rpt_family="AluJo" FT repeat_region complement(1265702..1265745) FT /rpt_family="GC_rich" FT repeat_region 1266390..1266435 FT /rpt_family="GC_rich" FT repeat_region complement(1266809..1266854) FT /rpt_family="GC_rich" FT repeat_region 1266999..1267079 FT /rpt_family="GC_rich" FT repeat_region 1267436..1267482 FT /rpt_family="LINE2" FT repeat_region complement(1269086..1269109) FT /rpt_family="GC_rich" FT misc_feature 1269363..1269409 FT /note="DDS similarity to AA166551 ms36a11.r1 Stratagene FT mouse heart (#937316) Mus musculus cDNA clone 613628 5' FT similar to gb:D78135 Mouse mRNA for CIRP (MOUSE); (1..47); FT 100% identity." FT repeat_region 1269447..1269555 FT /rpt_family="(CGG)n" FT repeat_region complement(1269708..1269760) FT /rpt_family="GC_rich" FT repeat_region 1270485..1270776 FT /rpt_family="AluJo" FT misc_feature 1270927..1271035 FT /note="DDS similarity to AA166551 ms36a11.r1 Stratagene FT mouse heart (#937316) Mus musculus cDNA clone 613628 5' FT similar to gb:D78135 Mouse mRNA for CIRP (MOUSE); FT (48..155); 99% identity.~~predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 95.000" FT gene 1270933..1272442 FT /map="19p13.3" FT /gene="CIRBP" FT /note="Cold Inducible RNA Binding Protein; CIRP" FT CDS join(1270933..1271035,1271139..1271245,1271328..1271466, FT 1271550..1271631,1271980..1272050,1272426..1272442) FT /codon_start=1 FT /gene="CIRBP" FT /product="CIRP" FT /note="Human cold inducible RNA binding protein; 96% FT identical to human glycine-rich RNA binding protein FT (D78134).~~Also identified as DNA damage-inducible FT transcript" FT /protein_id="AAC04895.1" FT /translation="MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQR FT SRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFF FT RGGRGRGRGFSRGGGDRGYGGNRFESRSGGYGGSRDYYSSRSQSGGYSDRSSGGSYRDS FT YDSYATHNE" FT repeat_region complement(1271050..1271075) FT /rpt_family="GC_rich" FT misc_feature 1271139..1271245 FT /gene="CIRBP" FT /note="DDS similarity to AA166551 ms36a11.r1 Stratagene FT mouse heart (#937316) Mus musculus cDNA clone 613628 5' FT similar to gb:D78135 Mouse mRNA for CIRP (MOUSE); 100% FT identity.~~~predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 93.000" FT misc_feature 1271328..1271466 FT /gene="CIRBP" FT /note="DDS similarity to AA166551 ms36a11.r1 Stratagene FT mouse heart (#937316) Mus musculus cDNA clone 613628 5' FT similar to gb:D78135 Mouse mRNA for CIRP (MOUSE); FT (263..399); 98.5% identity.~~predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 93.000" FT misc_feature 1271550..1271631 FT /gene="CIRBP" FT /note="DDS similarity to AA166551 ms36a11.r1 Stratagene FT mouse heart (#937316) Mus musculus cDNA clone 613628 5' FT similar to gb:D78135 Mouse mRNA for CIRP (MOUSE); FT (400..481); 100% identity.~~predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 100.000" FT misc_feature 1271751..1272158 FT /gene="CIRBP" FT /note="DDS similarity to AA312010 EST182712 Jurkat T-cells FT VI Homo sapiens cDNA 5' end; Score: 792 Identity: 402/408 FT (98%)." FT misc_feature 1271980..1272050 FT /gene="CIRBP" FT /note="DDS similarity to AA166551 ms36a11.r1 Stratagene FT mouse heart (#937316) Mus musculus cDNA clone 613628 5' FT similar to gb:D78135 Mouse mRNA for CIRP (MOUSE); FT (482..552); 96% identity." FT misc_feature 1272426..1273169 FT /note="DDS similarity to overlapping ESTs:~(6666..6710) FT AA166551 ms36a11.r1 Stratagene mouse heart (#937316) Mus FT musculus cDNA clone 613628 5' similar to gb:D78135 Mouse FT mRNA for CIRP (MOUSE); (553..597); 98% FT identity.~~(6666..7129) N80110 yz87g01.r1 Homo sapiens cDNA FT clone 290064 5'. Score: 885 Identity: 469/476 FT (98%).~~(6676..7177)AA278340 zs93g06.r1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone IMAGE:705082 5'. Score: 977 Identity: FT 498/501 (99%).~~(7409..6890) AA191613 zq43g08.s1 Stratagene FT hNT neuron (#937233) Homo sapiens cDNA clone 632510 FT 3'.~Score: 999 Identity: 517/519 (99%).~~Also AA620391, FT AA601523, N73458" FT misc_feature 1273231..1273329 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 63.000" FT misc_feature 1273413..1274772 FT /note="DDS similarity to overlapping ESTs:~(7653..7978) FT H83786 ys64b04.r1 Homo sapiens cDNA clone 219535 5'. Score: FT 620 Identity: 325/330 (98%).~~(7738..8169) R83803 FT yp06e01.r1 Homo sapiens cDNA clone 186648 5'. Score: 782 FT Identity: 424/440 (96%).~~(8078..8450) AA485802 zx91b05.r1 FT Soares ovary tumor NbHOT Homo sapiens cDNA clone 811089 5'. FT Score: 746 Identity: 373/373 (100%).~~(8175..8738) FT AA143491 zo31a09.r1 Stratagene colon (#937204) Homo sapiens FT cDNA clone 588472 5'; Score: 926 Identity: 524/552 FT (94%).~~(8320..8623) AA493849 nh03b07.s1 NCI_CGAP_Thy1 Homo FT sapiens cDNA clone IMAGE:943189. Score: 574 Identity: FT 296/300 (98%).~~(9012..8578) AA565221 nj23b02.s1 FT NCI_CGAP_AA1 Homo sapiens cDNA clone IMAGE:993291. Score: FT 850 Identity: 431/433 (99%)." FT repeat_region complement(1273797..1273840) FT /rpt_family="POLY_A" FT misc_feature 1274648..1274786 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 77.000" FT repeat_region complement(1275384..1275449) FT /rpt_family="GC_rich" FT repeat_region complement(1275516..1275561) FT /rpt_family="GC_rich" FT misc_feature 1275549..1275829 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 70.000~~(9799..10069) DDS FT similarity to AA292217 zt50b07.r1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 725749 5' (1..258); 93% identity.~" FT repeat_region complement(1275562..1275617) FT /rpt_family="(CAG)n" FT repeat_region complement(1275912..1275948) FT /rpt_family="(GGGA)n" FT misc_feature 1276033..1276102 FT /note="DDS similarity to overlapping ESTs:~(10273..10342) FT AA406404 zv12c01.r1 Soares NhHMPuS1 Homo sapiens cDNA clone FT 753408 5' (1..70); 98% identity.~~(10287..10342) R69395 FT yj83c10.r1 Homo sapiens cDNA clone 155346 5' (1..56); 98% FT identity.~~" FT repeat_region complement(1276554..1276692) FT /rpt_family="AluJb" FT repeat_region 1276854..1276943 FT /rpt_family="MIR" FT misc_feature 1277182..1277298 FT /note="DDS similarity to overlapping ESTs:~AA292217 FT zt50b07.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 725749 5' (259..378); 92% identity.~~AA406404 zv12c01.r1 FT Soares NhHMPu S1 Homo sapiens cDNA clone 753408 5' FT (71..187); 96% identity.~~R69395 yj83c10.r1 Homo sapiens FT cDNA clone 155346 5' (57..173); 92% identity.~~AA233053 FT zr68a07.r1 Soares NhHMPu S1 Homo sapiens cDNA clone 668532 FT 5' (45..159); 94% identity.~~predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 96.000" FT repeat_region complement(1277517..1277772) FT /rpt_family="AluSq" FT repeat_region complement(1277777..1278073) FT /rpt_family="AluSq" FT misc_feature 1278776..1279205 FT /note="DDS similarity to overlapping ESTs:~(13016..13208) FT AA292217 zt50b07.r1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 725749 5' (379..570); 99% FT identity.~~(13016..13202) R69395 yj83c10.r1 Homo sapiens FT cDNA clone 155346 5' (174..360); 99% FT identity.~~(13016..13327) AA406404 zv12c01.r1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 753408 5' (188..498); 99% FT identity.~~(13016..13378) AA233053 zr68a07.r1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 668532 5' (160..519); 99% FT identity.~~(13016..13445) AA625270 af68c10.r1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 1047186 5'. Score: 841 Identity: FT 433/444 (97%).~~Other EST matches: H26715,AA056473, H81562, FT AA232686, AA613314" FT misc_feature complement(1280354..1280703) FT /note="DDS similarity to AA584590 no08e03.s1 NCI_CGAP_Phe1 FT Homo sapiens cDNA clone IMAGE:1100092. Score: 700 Identity: FT 350/350 (100%)." FT repeat_region complement(1280457..1280565) FT /rpt_family="(CAGA)n" FT repeat_region complement(1280739..1280774) FT /rpt_family="GC_rich" FT repeat_region complement(1280972..1281019) FT /rpt_family="(CA)n" FT repeat_region 1282072..1282193 FT /rpt_family="(GGA)n" FT repeat_region 1282200..1282356 FT /rpt_family="(GGGA)n" FT repeat_region 1282374..1282494 FT /rpt_family="(GGAA)n" FT repeat_region 1282510..1282635 FT /rpt_family="(GGGA)n" FT repeat_region 1282636..1282758 FT /rpt_family="(GGGA)n" FT misc_feature 1284797..1284921 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 58.000" FT repeat_region 1284965..1285096 FT /rpt_family="FLAM_C" FT misc_feature 1285504..1285584 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 81.000" FT repeat_region 1285751..1286032 FT /rpt_family="GC_rich" FT repeat_region complement(1286044..1286090) FT /rpt_family="(CGGG)n" FT repeat_region complement(1286084..1286263) FT /rpt_family="(CGG)n" FT misc_feature 1286123..1286307 FT /note="DDS similarity to AA170896 ms49f07.r1 Life Tech FT mouse embryo 13 5dpc 10666014 Mus musculus cDNA clone FT 614917 5' similar to gb:U14752 Mus musculus Cek7 ligand FT mRNA; (1..171); 74% identity." FT gene 1286168..1299944 FT /map="19p13.3" FT /gene="EPLG6" FT /note="EPH-Related Receptor Tyrosine Kinase Ligand 6; FT EFNA2; ephrin-A2; ELF-1; LERK6" FT CDS join(1286168..1286307,1295544..1295857,1298550..1298615, FT 1299823..1299944) FT /codon_start=1 FT /gene="EPLG6" FT /product="EPL6_HUMAN" FT /note="EPH-RELATED RECEPTOR TYROSINE KINASE LIGAND 6 FT PRECURSOR (LERK-6) (ELF-1); FUNCTION: BINDS TO THE RECEPTOR FT TYROSINE KINASES CEK7, MEK4 AND SEK. ~SIMILARITY: TO OTHER FT MEMBERS OF THE EPHRIN FAMILY" FT /protein_id="AAC04896.1" FT /translation="MAPAQRPLLPLLLLLLPLPPPPFARAEDAARANSDRYAVYWNRSN FT PRFHAGAGDDGGGYTVEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDH FT RQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLGFEFRPGHEYYYISATPPNAVDRPC FT LRLKVYVRPTNETLYEAPEPIFTSNNSCSSPGGCRLFLSTIPVLWTLLGS" FT repeat_region complement(1286953..1287004) FT /rpt_family="MIR" FT repeat_region complement(1289162..1289254) FT /rpt_family="(CA)n" FT repeat_region complement(1289290..1289382) FT /rpt_family="(CA)n" FT repeat_region complement(1292545..1292774) FT /rpt_family="LINE2" FT repeat_region complement(1294577..1294629) FT /rpt_family="MIR" FT misc_feature 1295544..1295857 FT /gene="EPLG6" FT /note="DDS similarity to AA170896 ms49f07.r1 Life Tech FT mouse embryo 13 5dpc 10666014 Mus musculus cDNA clone FT 614917 5' similar to gb:U14752 Mus musculus Cek7 ligand FT mRNA; (172..484); 86% identity.~~predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 96.000" FT repeat_region 1295748..1295773 FT /rpt_family="GC_rich" FT repeat_region 1295869..1296070 FT /rpt_family="GC_rich" FT repeat_region complement(1296136..1296211) FT /rpt_family="MIR" FT repeat_region 1296394..1296663 FT /rpt_family="AluJo" FT repeat_region 1297787..1298091 FT /rpt_family="AluSq" FT repeat_region 1298791..1298954 FT /rpt_family="AluSg/x" FT repeat_region 1298958..1299256 FT /rpt_family="AluSx" FT repeat_region 1299276..1299569 FT /rpt_family="AluSc" FT repeat_region 1299571..1299608 FT /rpt_family="POLY_A" FT repeat_region complement(1300241..1300286) FT /rpt_family="POLY_A" FT misc_feature complement(1300276..1300565) FT /note="DDS similarity to overlapping ESTs:~(34516..34805) FT AA494378 ne28f05.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:898689 similar to contains element MER22 repetitive FT element; Score: 580 Identity: 290/290 FT (100%).~~34514..34817) N58523 yv72h06.s1 Soares fetal liver FT spleen 1NFLS Homo sapiens cDNA clone 248315 3' similar to FT contains element PTR7 repetitive element ;~Score: 580 FT Identity: 297/304 (97%)." FT misc_feature complement(1300794..1301430) FT /note="DDS similarity to overlapping ESTs:~(35312..34034) FT AA586823 nn79c06.s1 NCI_CGAP_Co9 Homo sapiens cDNA clone FT IMAGE:1090090. Score: 521 Identity: 286/294 FT (97%).~~(35667..35252) AA554310 nl03b07.s1 NCI_CGAP_Co3 FT Homo sapiens cDNA clone IMAGE:1029205. Score: 782 Identity: FT 410/418 (98%).~~(35670..35375) AA502384 ne27f11.s1 FT NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:898605. Score: FT 546 Identity: 294/295 (99%)." FT misc_feature complement(1300822..1300857) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 82.000" FT repeat_region 1301073..1301130 FT /rpt_family="POLY_A" FT repeat_region 1301213..1301242 FT /rpt_family="AT_rich" FT repeat_region 1301502..1301810 FT /rpt_family="AluSx" FT repeat_region 1301811..1301965 FT /rpt_family="AluJo/FRAM" FT repeat_region 1301966..1301993 FT /rpt_family="(TAA)n" FT misc_feature complement(1302013..1302177) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 54.000" FT repeat_region complement(1302497..1302522) FT /rpt_family="MIR" FT misc_feature complement(1302566..1302694) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 63.000" FT repeat_region complement(1303025..1303425) FT /rpt_family="L1MB6" FT repeat_region complement(1303453..1303567) FT /rpt_family="AluJo" FT repeat_region complement(1303461..1303554) FT /rpt_family="Alu" FT repeat_region complement(1303638..1303680) FT /rpt_family="AluJo" FT repeat_region complement(1303648..1303704) FT /rpt_family="AluSg/x" FT repeat_region complement(1303651..1303878) FT /rpt_family="Alu" FT repeat_region complement(1303717..1303852) FT /rpt_family="AluSg/x" FT repeat_region complement(1303919..1304218) FT /rpt_family="AluSx" FT repeat_region complement(1303924..1304207) FT /rpt_family="Alu" FT repeat_region 1304258..1304384 FT /rpt_family="LINE2" FT repeat_region 1305256..1305571 FT /rpt_family="AluJb" FT repeat_region 1305266..1305557 FT /rpt_family="Alu" FT repeat_region 1305581..1305768 FT /rpt_family="AluSq" FT repeat_region 1305591..1305766 FT /rpt_family="Alu" FT repeat_region 1305810..1305882 FT /rpt_family="POLY_A" FT repeat_region complement(1306049..1306351) FT /rpt_family="AluY" FT repeat_region complement(1306051..1306657) FT /rpt_family="Alu" FT repeat_region complement(1306355..1306657) FT /rpt_family="AluY" FT repeat_region complement(1306805..1307104) FT /rpt_family="AluSg" FT repeat_region complement(1306810..1307403) FT /rpt_family="Alu" FT repeat_region complement(1307105..1307403) FT /rpt_family="AluSx" FT misc_feature complement(1307406..1307612) FT /note="BLASTX similarity to P11174 (38..106); match: 0.75, FT score: 1.3e-51; database searched: nr; 40S RIBOSOMAL FT PROTEIN S15 (RIG PROTEIN) pir||R3HU15 ribosomal protein S15 FT - human >pir||R3RT15 ribosomal protein S15 -" FT misc_feature complement(1307412..1307724) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 92.000" FT misc_feature complement(1307592..1307717) FT /note="BLASTX similarity to P11174 (2..43); match: 0.78, FT score: 1.3e-51; database searched: nr; 40S RIBOSOMAL FT PROTEIN S15 (RIG PROTEIN) pir||R3HU15 ribosomal protein S15 FT - human >pir||R3RT15 ribosomal protein S15 -" FT repeat_region complement(1307754..1308042) FT /rpt_family="AluJo" FT repeat_region complement(1307784..1308042) FT /rpt_family="Alu" FT repeat_region complement(1308885..1309184) FT /rpt_family="AluJo" FT repeat_region complement(1308892..1309314) FT /rpt_family="Alu" FT repeat_region complement(1309201..1309321) FT /rpt_family="AluJb" FT repeat_region complement(1309332..1309396) FT /rpt_family="MIR" FT repeat_region 1309959..1309993 FT /rpt_family="MIR" FT repeat_region 1310040..1310160 FT /rpt_family="LINE2" FT repeat_region complement(1311194..1311221) FT /rpt_family="MIR" FT repeat_region 1312078..1312380 FT /rpt_family="AluSq" FT repeat_region 1312082..1312379 FT /rpt_family="Alu" FT repeat_region 1313101..1313133 FT /rpt_family="MIR" FT misc_feature complement(1313419..1313582) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 60.000" FT repeat_region complement(1314517..1314744) FT /rpt_family="AluJo" FT repeat_region complement(1314529..1315340) FT /rpt_family="Alu" FT repeat_region complement(1314870..1315036) FT /rpt_family="AluJ" FT repeat_region complement(1315037..1315340) FT /rpt_family="AluSx" FT repeat_region complement(1315341..1315473) FT /rpt_family="MIR" FT repeat_region 1315682..1315770 FT /rpt_family="MIR" FT repeat_region complement(1315786..1315841) FT /rpt_family="GC_rich" FT repeat_region complement(1316312..1316350) FT /rpt_family="MIR" FT repeat_region 1317081..1317352 FT /rpt_family="AluSx" FT repeat_region 1317087..1317339 FT /rpt_family="Alu" FT repeat_region 1317367..1317480 FT /rpt_family="LINE2" FT repeat_region complement(1317569..1317708) FT /rpt_family="AluJ" FT repeat_region complement(1317576..1317698) FT /rpt_family="Alu" FT repeat_region complement(1317900..1318194) FT /rpt_family="L1MB7" FT repeat_region 1318195..1318498 FT /rpt_family="AluSx" FT repeat_region 1318205..1318498 FT /rpt_family="Alu" FT repeat_region complement(1319174..1319207) FT /rpt_family="GC_rich" FT repeat_region complement(1319462..1319765) FT /rpt_family="AluSp" FT repeat_region complement(1319464..1320059) FT /rpt_family="Alu" FT repeat_region complement(1319768..1320069) FT /rpt_family="AluSx" FT repeat_region complement(1320303..1320406) FT /rpt_family="AluJb" FT repeat_region complement(1320303..1320944) FT /rpt_family="Alu" FT repeat_region complement(1320541..1320733) FT /rpt_family="AluSq" FT repeat_region complement(1320753..1320809) FT /rpt_family="L1MB8" FT repeat_region complement(1320816..1320948) FT /rpt_family="AluSq/x" FT repeat_region complement(1320966..1321276) FT /rpt_family="AluY" FT repeat_region complement(1320973..1321267) FT /rpt_family="Alu" FT repeat_region complement(1321285..1321626) FT /rpt_family="L1MB7" FT repeat_region 1322707..1323033 FT /rpt_family="(GA)n" FT repeat_region 1323629..1323715 FT /rpt_family="MLT1C" FT repeat_region 1323716..1324022 FT /rpt_family="AluY" FT repeat_region 1323716..1324021 FT /rpt_family="Alu" FT repeat_region complement(1324562..1324655) FT /rpt_family="LINE2" FT repeat_region complement(1325113..1325140) FT /rpt_family="MIR" FT repeat_region complement(1325358..1325401) FT /rpt_family="GC_rich" FT repeat_region 1326236..1326276 FT /rpt_family="AluJb" FT repeat_region complement(1326280..1326578) FT /rpt_family="AluSg" FT repeat_region complement(1326295..1326574) FT /rpt_family="Alu" FT repeat_region 1326581..1326849 FT /rpt_family="AluJb" FT repeat_region 1326585..1326849 FT /rpt_family="Alu" FT repeat_region 1326859..1327156 FT /rpt_family="Alu" FT /note="AluY" FT repeat_region complement(1327691..1327734) FT /rpt_family="L1MB5" FT repeat_region complement(1327816..1328113) FT /rpt_family="AluSx" FT repeat_region complement(1327828..1328103) FT /rpt_family="Alu" FT repeat_region 1328447..1329371 FT /rpt_family="Alu" FT repeat_region 1328448..1328613 FT /rpt_family="AluSg/x" FT repeat_region 1328619..1328916 FT /rpt_family="AluY" FT repeat_region 1329151..1329373 FT /rpt_family="AluSg/x" FT misc_feature 1329404..1329603 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 51.000" FT repeat_region complement(1329713..1329996) FT /rpt_family="AluSx" FT repeat_region complement(1329713..1330432) FT /rpt_family="Alu" FT repeat_region complement(1329997..1330128) FT /rpt_family="AluJo/FLAM" FT repeat_region complement(1330136..1330437) FT /rpt_family="AluY" FT repeat_region 1330822..1331520 FT /rpt_family="Alu" FT repeat_region 1330950..1331146 FT /rpt_family="AluSp" FT repeat_region 1331216..1331514 FT /rpt_family="AluY" FT misc_feature 1331987..1332095 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 72.000" FT repeat_region complement(1332386..1332687) FT /rpt_family="AluSx" FT repeat_region complement(1332388..1332677) FT /rpt_family="Alu" FT repeat_region complement(1332744..1333043) FT /rpt_family="AluY" FT repeat_region complement(1332754..1333059) FT /rpt_family="Alu" FT repeat_region complement(1333046..1333080) FT /rpt_family="AT_rich" FT repeat_region 1333091..1333380 FT /rpt_family="AluJb" FT repeat_region 1333098..1333380 FT /rpt_family="Alu" FT repeat_region complement(1333409..1333684) FT /rpt_family="AluSp" FT repeat_region complement(1333423..1333673) FT /rpt_family="Alu" FT repeat_region 1333699..1333761 FT /rpt_family="Alu" FT repeat_region 1334335..1334635 FT /rpt_family="AluY" FT repeat_region 1334346..1334638 FT /rpt_family="Alu" FT repeat_region complement(1334834..1335120) FT /rpt_family="AluSx" FT repeat_region complement(1334846..1335430) FT /rpt_family="Alu" FT repeat_region complement(1335178..1335353) FT /rpt_family="AluSx" FT repeat_region complement(1335359..1335418) FT /rpt_family="AluJ/FRAM" FT repeat_region complement(1335583..1335885) FT /rpt_family="AluY" FT repeat_region complement(1335585..1335885) FT /rpt_family="Alu" FT misc_feature 1335959..1336042 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 81.000" FT repeat_region complement(1336648..1336946) FT /rpt_family="AluSx" FT repeat_region complement(1336673..1337273) FT /rpt_family="Alu" FT repeat_region complement(1336958..1336997) FT /rpt_family="AT_rich" FT repeat_region complement(1336998..1337282) FT /rpt_family="AluSx" FT repeat_region complement(1337308..1337371) FT /rpt_family="FLAM" FT repeat_region 1337377..1337508 FT /rpt_family="FLAM_C" FT repeat_region 1337401..1337865 FT /rpt_family="Alu" FT repeat_region complement(1337525..1337567) FT /rpt_family="AluJ/F(R)AM" FT repeat_region 1337592..1337874 FT /rpt_family="AluSx" FT repeat_region complement(1337875..1338121) FT /rpt_family="AluJb" FT repeat_region complement(1337875..1338112) FT /rpt_family="Alu" FT repeat_region 1338460..1338753 FT /rpt_family="AluSx" FT /note="Alu" FT repeat_region 1338754..1339050 FT /rpt_family="AluSg" FT repeat_region 1338761..1339050 FT /rpt_family="Alu" FT repeat_region complement(1339346..1339414) FT /rpt_family="MLT1D" FT repeat_region complement(1339415..1339501) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(1339421..1339551) FT /rpt_family="Alu" FT repeat_region complement(1339598..1339874) FT /rpt_family="Alu" FT repeat_region 1340491..1340791 FT /rpt_family="AluSx" FT repeat_region 1340491..1340782 FT /rpt_family="Alu" FT repeat_region 1341567..1341863 FT /rpt_family="AluY" FT repeat_region 1341567..1341861 FT /rpt_family="Alu" FT repeat_region 1341879..1342159 FT /rpt_family="AluSg" FT repeat_region complement(1342181..1342289) FT /rpt_family="FLAM_C" FT repeat_region 1342375..1342666 FT /rpt_family="AluSg" FT repeat_region 1342379..1342666 FT /rpt_family="Alu" FT repeat_region 1342670..1342934 FT /rpt_family="Alu" FT repeat_region 1342670..1342976 FT /rpt_family="AluSq" FT repeat_region 1342982..1343159 FT /rpt_family="Alu" FT /note="AluSg/x" FT repeat_region 1343161..1343427 FT /rpt_family="L1MC2" FT repeat_region 1343430..1343735 FT /rpt_family="AluSx" FT repeat_region 1343440..1343733 FT /rpt_family="Alu" FT repeat_region 1343738..1344034 FT /rpt_family="AluSx" FT repeat_region 1343748..1344201 FT /rpt_family="Alu" FT repeat_region 1344049..1344217 FT /rpt_family="FRAM" FT repeat_region 1344537..1344837 FT /rpt_family="AluSx" FT repeat_region 1344548..1344835 FT /rpt_family="Alu" FT repeat_region complement(1345256..1345553) FT /rpt_family="AluSp" FT repeat_region complement(1345574..1345874) FT /rpt_family="AluSq" FT repeat_region complement(1345589..1346311) FT /rpt_family="Alu" FT repeat_region complement(1345895..1346020) FT /rpt_family="FLAM_C" FT repeat_region complement(1346026..1346323) FT /rpt_family="AluSx" FT repeat_region complement(1346335..1346747) FT /rpt_family="Alu" FT repeat_region complement(1346335..1346626) FT /rpt_family="AluY" FT repeat_region complement(1346629..1346766) FT /rpt_family="AluJo" FT repeat_region complement(1346768..1346847) FT /rpt_family="MLT1B" FT repeat_region complement(1346849..1347146) FT /rpt_family="Alu" FT repeat_region complement(1346854..1347155) FT /rpt_family="AluSq" FT repeat_region complement(1347156..1347280) FT /rpt_family="THE1B" FT repeat_region complement(1347156..1347663) FT /rpt_family="THE1" FT repeat_region 1347282..1347538 FT /rpt_family="AluSx" FT repeat_region 1347312..1347533 FT /rpt_family="Alu" FT repeat_region complement(1347539..1347668) FT /rpt_family="THE1B" FT repeat_region 1347669..1347979 FT /rpt_family="Alu" FT repeat_region 1347669..1347981 FT /rpt_family="AluY" FT repeat_region complement(1347984..1348020) FT /rpt_family="THE1B" FT repeat_region complement(1348186..1348307) FT /rpt_family="AluSq/x" FT repeat_region complement(1348189..1348297) FT /rpt_family="Alu" FT repeat_region complement(1348419..1348724) FT /rpt_family="AluSq" FT repeat_region complement(1348424..1348720) FT /rpt_family="Alu" FT repeat_region complement(1348735..1348998) FT /rpt_family="AluJo" FT repeat_region complement(1348751..1348958) FT /rpt_family="Alu" FT misc_feature 1349412..1349453 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 78.000" FT repeat_region 1349585..1349684 FT /rpt_family="MLT1C" FT repeat_region 1349688..1349996 FT /rpt_family="AluSx" FT repeat_region 1349699..1349995 FT /rpt_family="Alu" FT repeat_region 1349997..1350067 FT /rpt_family="MLT1C" FT repeat_region 1350072..1350156 FT /rpt_family="Alu" FT repeat_region 1350072..1350163 FT /rpt_family="FLAM_C" FT repeat_region complement(1350173..1350476) FT /rpt_family="AluSx" FT repeat_region complement(1350178..1350776) FT /rpt_family="Alu" FT repeat_region complement(1350485..1350783) FT /rpt_family="AluSg" FT repeat_region complement(1350789..1350902) FT /rpt_family="AluJb" FT repeat_region complement(1350791..1350873) FT /rpt_family="Alu" FT repeat_region 1351415..1351636 FT /rpt_family="L1ME" FT repeat_region 1352060..1352357 FT /rpt_family="AluSq" FT repeat_region 1352069..1352357 FT /rpt_family="Alu" FT repeat_region complement(1352385..1352452) FT /rpt_family="AluJ/FLAM" FT repeat_region complement(1352387..1352452) FT /rpt_family="Alu" FT repeat_region complement(1352468..1352768) FT /rpt_family="AluJb" FT repeat_region complement(1352478..1352760) FT /rpt_family="Alu" FT repeat_region complement(1352859..1353156) FT /rpt_family="AluSx" FT repeat_region complement(1352866..1353156) FT /rpt_family="Alu" FT repeat_region 1353248..1353551 FT /rpt_family="AluJo" FT repeat_region 1353275..1353533 FT /rpt_family="Alu" FT repeat_region complement(1353559..1353666) FT /rpt_family="MER44C" FT repeat_region complement(1353559..1353726) FT /rpt_family="MER44C" FT repeat_region complement(1353745..1354027) FT /rpt_family="AluSx" FT repeat_region complement(1353748..1354116) FT /rpt_family="Alu" FT repeat_region complement(1354034..1354116) FT /rpt_family="FLAM" FT repeat_region 1354138..1354389 FT /rpt_family="AluJb" FT repeat_region 1354148..1354389 FT /rpt_family="Alu" FT repeat_region 1354732..1354769 FT /rpt_family="GC_rich" FT misc_feature 1354799..1355134 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 53.000" FT repeat_region complement(1354826..1354888) FT /rpt_family="GC_rich" FT repeat_region 1354970..1355086 FT /rpt_family="(CGG)n" FT mRNA 1355002..1358198 FT /product="Human clone 350/2 melanoma ubiquitous mutated FT protein (MUM-1) gene, partial cds" FT /note="gb|I32615|I32615 Sequence 1 from patent US 5589334." FT repeat_region 1355123..1355220 FT /rpt_family="GC_rich" FT exon 1356323..1356448 FT /note="DPS similarity to (U20897) melanoma ubiquitous FT mutated protein [Homo sapiens]; (residues 5..46); 99% FT identity. Note: Genomic sequence identifies a GC FT compression in orginal cDNA sequence at residue 32 which FT results in in-frame stop in predicted CDS." FT repeat_region 1356836..1356877 FT /rpt_family="MIR" FT exon 1357008..1357093 FT /note="DPS similarity to (U20897) melanoma ubiquitous FT mutated protein [Homo sapiens]; (residues 47..75); 100% FT identity." FT misc_feature 1357417..1358204 FT /note="DDS similarity to overlapping ESTs: (17501..17978) FT N51475 yz04d02.s1 Homo sapiens cDNA clone 282051 3'. Score: FT 923 Identity: 475/481 (98%).~(17501..17939) N21175 FT yx47g01.s1 Homo sapiens cDNA clone 264912 3'. Score: 870 FT Identity: 437/439 (99%).~(17638..18099) AA143178 zl49g03.r1 FT Soares pregnant uterus NbHPU Homo sapiens cDNA clone 505300 FT 5' similar to contains element MER4 repetitive element ; FT Score: 897 Identity: 460/463 (99%).~(18272..17645) FT AA143060 zl49g03.s1 Soares pregnant uterus NbHPU Homo FT sapiens cDNA clone 505300 3' similar to contains element FT MER4 repetitive element ; Score: 1145 Identity: 611/617 FT (99%).~(17782..18270) AA291374 zt44d04.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 725191 5'. Score: 978 FT Identity: 489/489 (100%).~(18288..17799) N29137 yx47g01.r1 FT Homo sapiens cDNA clone 264912 5'. Score: 933 Identity: FT 487/499 (97%)" FT exon 1358393..1358463 FT /note="DPS similarity to (U20897) melanoma ubiquitous FT mutated protein [Homo sapiens]; (residues 76..99); 100% FT identity.~predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 74.000" FT exon 1360135..1361031 FT /note="DPS similarity to (U20897) melanoma ubiquitous FT mutated protein [Homo sapiens]; (residues 100..398); 100% FT identity.~(20110..20299) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: good, score: FT 51.000~(20711..20824) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: good, score: FT 67.000" FT repeat_region complement(1362001..1362062) FT /rpt_family="(GGGA)n" FT exon 1362249..1362350 FT /note="DPS similarity to (U20897) melanoma ubiquitous FT mutated protein [Homo sapiens]; (residues 399..432); 100% FT identity.~predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 74.000~DDS similarity to: FT (22413..22434) dbj|D44937|HUMSUPY422 Human brain cDNA FT (striata), OS79-K-2; (1..22); 100% identity." FT repeat_region complement(1363013..1363068) FT /rpt_family="L1MD3" FT misc_feature complement(1364084..1364544) FT /note="DDS similarity to AA419527 zv03d10.r1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 752563 5'. Score: 891 Identity: FT 457/458 (99%)." FT repeat_region complement(1364463..1364499) FT /rpt_family="POLY_A" FT exon 1364508..1364528 FT /note="DPS similarity to (U20897) melanoma ubiquitous FT mutated protein [Homo sapiens]; (residues 433..438); 100% FT identity.~DDS similarity to overlapping ESTs: FT dbj|D44937|HUMSUPY422 Human brain cDNA (striata), OS79-K-2; FT (23..93); 100% identity.~AA118438 ml56h08.r1 Stratagene FT mouse testis (#937308) Mus musculus cDNA clone 516063 5' FT (37..107); 87% identity." FT repeat_region 1364836..1365143 FT /rpt_family="AluSx" FT misc_feature 1367154..1367873 FT /note="DDS similarity to overlapping ESTs: (27238..27707) FT W15556 zb05a08.r1 Soares fetal lung NbHL19W Homo sapiens FT cDNA clone 301142 5'. Score: 845 Identity: 465/479 FT (97%).~(27957..27504) N80787 zb06a08.s1 Homo sapiens cDNA FT clone 301238 3'. Score: 825 Identity: 449/463 (96%)." FT repeat_region complement(1367403..1367498) FT /rpt_family="MIR" FT repeat_region complement(1367925..1368220) FT /rpt_family="AluSg" FT repeat_region complement(1367929..1368221) FT /rpt_family="Alu" FT misc_feature 1369264..1369339 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature 1369595..1369645 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 93.000" FT repeat_region 1369947..1370244 FT /rpt_family="AluJo" FT repeat_region 1369960..1370239 FT /rpt_family="Alu" FT misc_feature 1370641..1370726 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 67.000" FT misc_feature 1370884..1371077 FT /note="DDS similarity to overlapping ESTs: (30968..31161) FT R20457 yg33f09.r1 Homo sapiens cDNA clone 34342 5'; FT (1..194); 100% identity.~(30980..31161) AA428710 zw18a09.r1 FT Soares ovary tumor NbHOT Homo sapiens cDNA clone 769624 5'; FT (1..180); 99% identity.~(31128..31161) AA573130 nj41f11.s1 FT NCI_CGAP_AA1 Homo sapiens cDNA clone IMAGE:995085; FT (559..527); 97% identity.~(31002..31161) predicted exon, FT program: grail2exons_human_1.3, frame: 0, quality: FT excellent, score: 90.000" FT repeat_region 1371448..1371503 FT /rpt_family="MER47A" FT misc_feature complement(1371541..1371821) FT /note="DDS similarity to H92004 ys82h05.r1 Homo sapiens FT cDNA clone 221337 5'. Score: 531 Identity: 282/287 (98%)." FT repeat_region complement(1371805..1372102) FT /rpt_family="AluY" FT repeat_region 1372138..1372342 FT /rpt_family="MER20" FT repeat_region 1372153..1372287 FT /rpt_family="MER20" FT repeat_region 1372476..1372781 FT /rpt_family="AluSg" FT misc_feature 1373071..1373159 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 97.000~DDS similarity FT to overlapping ESTs: R20457 yg33f09.r1 Homo sapiens cDNA FT clone 34342 5'; (195..283); 100% identity.~AA428710 FT zw18a09.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 769624 5'; (181..269); 100% identity.~AA573130 nj41f11.s1 FT NCI_CGAP_AA1 Homo sapiens cDNA clone IMAGE:995085; FT (526..438); 100% identity.~(33005..33243) AA034291 FT zk18f01.r1 Soares pregnant uterus NbHPU Homo sapiens cDNA FT clone 470905 5'; (1..237); 95% identity." FT misc_feature 1373485..1373597 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 52.000" FT repeat_region 1374746..1375235 FT /rpt_family="Alu" FT repeat_region 1374757..1374915 FT /rpt_family="FRAM" FT repeat_region 1374938..1375235 FT /rpt_family="AluSc" FT repeat_region complement(1375239..1375383) FT /rpt_family="L1MB4" FT repeat_region complement(1375396..1375508) FT /rpt_family="(TA)n" FT repeat_region complement(1375398..1375589) FT /rpt_family="HSATI" FT repeat_region 1375423..1375599 FT /rpt_family="HSATI" FT repeat_region 1375509..1375547 FT /rpt_family="AT_rich" FT repeat_region 1375548..1375666 FT /rpt_family="(TA)n" FT repeat_region complement(1375675..1375763) FT /rpt_family="AT_rich" FT repeat_region complement(1375803..1376105) FT /rpt_family="AluSg" FT repeat_region complement(1375810..1376438) FT /rpt_family="Alu" FT repeat_region complement(1376123..1376378) FT /rpt_family="AluY" FT misc_feature 1376507..1377311 FT /note="DDS similarity to overlapping ESTs:~(564..117) FT AA428278 zw18a09.s1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 769624 3'; Score: 843 Identity: 441/461 FT (95%).~~(563..127) AA573130 nj41f11.s1 NCI_CGAP_AA1 Homo FT sapiens cDNA clone IMAGE:995085; Score: 841 Identity: FT 441/446 (98%). ~~(541..99) H89953 ys82h05.s1 Homo sapiens FT cDNA clone 221337 3'. Score: 733 Identity: 422/464 FT (90%).~~(148..623) N31319 yx54a05.r1 Homo sapiens cDNA FT clone 265520 5'. Score: 930 Identity: 474/478 (99%). FT ~~(387..744) C17502 Human placenta cDNA 5'-end GEN-548D09. FT Score: 690 Identity: 354/356 (99%).~~(458..921) R14335 FT yf79b09.r1 Homo sapiens cDNA clone 28433 5'. Score: 692 FT Identity: 440/496 (88%).~~Additional EST matches:~D44938, FT H71984, D81984, R35196" FT misc_feature complement(1377908..1378430) FT /note="DDS similarity to H98977 yx11e03.s1 Homo sapiens FT cDNA clone 261436 3'. Score: 967 Identity: 509/522 FT (97%).~~Additional EST matches:~AA335644, AA677688, R50856, FT AA969114, R40661,T09489" FT repeat_region 1378591..1378876 FT /rpt_family="AluSx" FT repeat_region 1378906..1379017 FT /rpt_family="AluJb" FT repeat_region complement(1380190..1380221) FT /rpt_family="(CCAA)n" FT repeat_region complement(1380222..1380480) FT /rpt_family="AluJb" FT repeat_region complement(1380497..1380590) FT /rpt_family="(GGGA)n" FT repeat_region complement(1380788..1380943) FT /rpt_family="MLT1B" FT repeat_region complement(1381007..1381057) FT /rpt_family="MLT1B" FT repeat_region 1381060..1381357 FT /rpt_family="AluSx" FT repeat_region 1381619..1381890 FT /rpt_family="L1MC3" FT repeat_region complement(1381917..1381949) FT /rpt_family="AT_rich" FT repeat_region 1381962..1382256 FT /rpt_family="AluSx" FT repeat_region complement(1382373..1382499) FT /rpt_family="FLAM_C" FT repeat_region complement(1382684..1382941) FT /rpt_family="AluSg/x" FT repeat_region complement(1383361..1383433) FT /rpt_family="tRNA-Phe-TTC" FT repeat_region 1383562..1383636 FT /rpt_family="tRNA-Asn-AAC" FT misc_feature 1383926..1383963 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 79.000" FT repeat_region 1383948..1384047 FT /rpt_family="(CGG)n" FT repeat_region 1384440..1384811 FT /rpt_family="MER80" FT repeat_region complement(1384812..1385086) FT /rpt_family="AluJb" FT repeat_region 1385238..1385532 FT /rpt_family="AluSp" FT repeat_region 1385537..1385837 FT /rpt_family="AluSp" FT repeat_region complement(1386246..1386481) FT /rpt_family="MLT1B" FT repeat_region complement(1386499..1386793) FT /rpt_family="AluSx" FT repeat_region complement(1386797..1386898) FT /rpt_family="MLT1B" FT misc_feature complement(1388421..1388925) FT /note="DDS similarity to AA594148 nn31e07.s1 NCI_CGAP_Gas1 FT Homo sapiens cDNA clone IMAGE:1085508 similar to FT SW:NUKM_BOVIN P42026 NADH-UBIQUINONE OXIDOREDUCTASE 20 KD FT SUBUNIT PRECURSOR ; Score: 960 Identity: 495/503 (98%)." FT CDS join(<1388875..1388937,1390870..1391049,1391118..1391164, FT 1393241..1393329,1395390..1395487) FT /codon_start=1 FT /product="NUKM_HUMAN, partial CDS" FT /note="NADH-UBIQUINONE OXIDOREDUCTASE 20 KD SUBUNIT FT PRECURSOR; COMPLE; CI-20KD; PSST SUBUNIT" FT /protein_id="AAC27669.1" FT /translation="PSSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPR FT YDMDRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGY FT YHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYRR" FT repeat_region 1388986..1389039 FT /rpt_family="(CA)n" FT repeat_region 1389043..1389174 FT /rpt_family="(CATG)n" FT repeat_region 1389175..1389262 FT /rpt_family="(CA)n" FT repeat_region 1389263..1389396 FT /rpt_family="(CATG)n" FT repeat_region complement(1389902..1390197) FT /rpt_family="AluY" FT repeat_region 1390587..1390686 FT /rpt_family="MER33" FT repeat_region complement(1391483..1391781) FT /rpt_family="AluSx" FT repeat_region complement(1391850..1392145) FT /rpt_family="AluSg" FT repeat_region complement(1392150..1392352) FT /rpt_family="AluJo" FT repeat_region complement(1392354..1392680) FT /rpt_family="L1MB7" FT repeat_region complement(1393783..1393924) FT /rpt_family="MER53" FT repeat_region complement(1394514..1394669) FT /rpt_family="(GGGA)n" FT repeat_region complement(1395488..1395522) FT /rpt_family="(CGG)n" FT gene complement(1397092..1401490) FT /gene="GAMT" FT /note="guanidinoacetate N-methyltransferase" FT misc_feature complement(1397092..1397498) FT /gene="GAMT" FT /note="DDS similarity to overlapping ESTs:~(21108..20702) FT AA702319 zf88h09.s1 Soares pineal gland N3HPG Homo sapiens FT cDNA clone 384065 3' similar to SW:GAMT_HUMAN Q14353 FT GUANIDINOACETATE N-METHYLTRANSFERASE ;contains element LTR4 FT repetitive element ; (425..21); 99% FT identity.~~(21108..20726) AA521337 aa68g06.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:826138 3' similar to FT TR:E184531 E184531 GUANIDINOACETATE N-METHYLTRANSFERASE. FT ;contains element MER22 repetitive element; (384..1); 99% FT identity.~~(21104..20712) F19653|HSPD04258 H.sapiens EST FT sequence (011-X4-27) from skeletal muscle; Score: 782 FT Identity: 392/393 (99%)." FT mRNA complement(1397134..1401517) FT /product="H.sapiens mRNA for guanidinoacetate FT N-methyltransferase" FT CDS complement(join(1397358..1397498,1398915..1399025, FT 1399127..1399194,1399523..1399586,1399792..1399937, FT 1401295..1401475)) FT /codon_start=1 FT /gene="GAMT" FT /product="GAMT_HUMAN" FT /note="GUANIDINOACETATE N-METHYLTRANSFERASE" FT /protein_id="AAC27668.1" FT /translation="MSAPSATPIFAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERW FT ETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAP FT RQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG FT GVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENIRTEVMALVPPADCRY FT YAFPQMITPLVTKG" FT repeat_region complement(1398046..1398094) FT /rpt_family="LINE2" FT repeat_region complement(1398095..1398396) FT /rpt_family="AluSx" FT repeat_region complement(1398433..1398741) FT /rpt_family="AluJo" FT misc_feature complement(1398915..1399025) FT /gene="GAMT" FT /note="DDS similarity to overlapping ESTs:~(22635..22217) FT AA709146 zf98g02.s1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 385010 3' similar to SW:GAMT_HUMAN Q14353 FT GUANIDINOACETATE N-METHYLTRANSFERASE ;contains Alu FT repetitive element;contains element TAR1 repetitive element FT ; (420..1); 99% identity.~~(22635..22520) AA238076 FT mx10e02.r1 Soares mouse NML Mus musculus cDNA clone 679802 FT 5' similar to SW:GAMT_RAT P10868 GUANIDINOACETATE FT N-METHYLTRANSFERASE ; (456..572); 89% FT identity.~~(22635..22601) AA625389 af71g11.r1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 1047524 5' similar to TR:E184531 FT E184531 GUANIDINOACETATE N-METHYLTRANSFERASE. ; (467..501); FT 94% identity.~~(22624..22525) AA521337 aa68g06.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:826138 3' FT similar to TR:E184531 E184531 GUANIDINOACETATE FT N-METHYLTRANSFERASE. ;contains element MER22 repetitive FT element ; (483..385); 87% identity.~(22575..22525) AA702319 FT zf88h09.s1 Soares pineal gland N3HPG Homo sapiens cDNA FT clone 384065 3' similar to SW:GAMT_HUMAN Q14353 FT GUANIDINOACETATE N-METHYLTRANSFERASE ;contains element LTR4 FT repetitive element ; (476..426); 92% identity." FT misc_feature complement(1399127..1399194) FT /gene="GAMT" FT /note="DDS similarity to overlapping ESTs:~AA709146 FT zf98g02.s1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 385010 3' similar to SW:GAMT_HUMAN Q14353 FT GUANIDINOACETATE N-METHYLTRANSFERASE ;contains Alu FT repetitive element;contains element TAR1 repetitive element FT ; (488..421); 100% identity.~~AA238076 mx10e02.r1 Soares FT mouse NML Mus musculus cDNA clone 679802 5' similar to FT SW:GAMT_RAT P10868 GUANIDINOACETATE N-METHYLTRANSFERASE ; FT (388..455); 84% identity.~~AA625389 af71g11.r1 Soares FT NhHMPu S1 Homo sapiens cDNA clone 1047524 5' similar to FT TR:E184531 E184531 GUANIDINOACETATE N-METHYLTRANSFERASE; FT (399..465); 100% identity." FT misc_feature complement(1399523..1399586) FT /gene="GAMT" FT /note="DDS similarity to overlapping ESTs:~(23196..23133) FT AA238076 mx10e02.r1 Soares mouse NML Mus musculus cDNA FT clone 679802 5' similar to SW:GAMT_RAT P10868 FT GUANIDINOACETATE N-METHYLTRANSFERASE ; (324..387); 92% FT identity.~~(23196..23133) AA625389 af71g11.r1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 1047524 5' similar to TR:E184531 FT E184531 GUANIDINOACETATE N-METHYLTRANSFERASE. ; (335..398); FT 97% identity.~~(23169..23133) AA709146 zf98g02.s1 Soares FT fetal heart NbHH19W Homo sapiens cDNA clone 385010 3' FT similar to SW:GAMT_HUMAN Q14353 GUANIDINOACETATE FT N-METHYLTRANSFERASE ;contains Alu repetitive FT element;contains element TAR1 repetitive element ; FT (525..489); 100% identity." FT misc_feature complement(1399792..1399937) FT /gene="GAMT" FT /note="DDS similarity to overlapping ESTs:~AA238076 FT mx10e02.r1 Soares mouse NML Mus musculus cDNA clone 679802 FT 5' similar to SW:GAMT_RAT P10868 GUANIDINOACETATE FT N-METHYLTRANSFERASE ; (178..323); 82% identity.~~AA625389 FT af71g11.r1 Soares NhHMPu S1 Homo sapiens cDNA clone 1047524 FT 5' similar to TR:E184531 E184531 GUANIDINOACETATE FT N-METHYLTRANSFERASE. ; (189..334); 99% identity." FT repeat_region complement(1401258..1401291) FT /rpt_family="GC_rich" FT misc_feature complement(1401295..1401490) FT /gene="GAMT" FT /note="DDS similarity to overlapping ESTs:~(25100..24905) FT AA625389 af71g11.r1 Soares NhHMPu S1 Homo sapiens cDNA FT clone 1047524 5' similar to TR:E184531 E184531 FT GUANIDINOACETATE N-METHYLTRANSFERASE. ; (1..188); 92% FT identity.~(245082..24905) AA238076 mx10e02.r1 Soares mouse FT NML Mus musculus cDNA clone 679802 5' similar to FT SW:GAMT_RAT P10868 GUANIDINOACETATE N-METHYLTRANSFERASE ; FT (1..177); 79% identity." FT repeat_region complement(1401398..1401426) FT /rpt_family="GC_rich" FT repeat_region complement(1401507..1401734) FT /rpt_family="GC_rich" FT repeat_region complement(1401852..1401908) FT /rpt_family="MIR" FT repeat_region complement(1401924..1402053) FT /rpt_family="FLAM_C" FT repeat_region complement(1402070..1402107) FT /rpt_family="(GAAA)n" FT repeat_region complement(1402108..1402160) FT /rpt_family="MER41B" FT repeat_region complement(1402167..1402206) FT /rpt_family="MIR" FT repeat_region complement(1402585..1402613) FT /rpt_family="(CAGG)n" FT repeat_region complement(1402635..1402735) FT /rpt_family="MIR" FT repeat_region complement(1403006..1403321) FT /rpt_family="AluSg" FT repeat_region 1403631..1403843 FT /rpt_family="AluSq" FT repeat_region 1403844..1404123 FT /rpt_family="L1MB3" FT repeat_region 1404124..1404419 FT /rpt_family="AluSp" FT repeat_region 1404424..1404479 FT /rpt_family="L1MB4" FT repeat_region complement(1404670..1404835) FT /rpt_family="AluSx" FT repeat_region complement(1404836..1405133) FT /rpt_family="AluSx" FT repeat_region complement(1405136..1405157) FT /rpt_family="AT_rich" FT repeat_region complement(1405289..1405419) FT /rpt_family="AluSx" FT repeat_region complement(1405421..1405733) FT /rpt_family="AluJo" FT repeat_region 1405756..1405895 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(1405929..1406226) FT /rpt_family="AluY" FT repeat_region complement(1406228..1406520) FT /rpt_family="AluSx" FT repeat_region complement(1406675..1406889) FT /rpt_family="MER20" FT repeat_region 1407027..1407096 FT /rpt_family="MIR" FT repeat_region 1407282..1407348 FT /rpt_family="(CG)n" FT repeat_region 1407555..1407666 FT /rpt_family="(CGG)n" FT repeat_region complement(1407737..1407772) FT /rpt_family="GC_rich" FT repeat_region complement(1407812..1408011) FT /rpt_family="GC_rich" FT repeat_region complement(1408059..1408079) FT /rpt_family="GC_rich" FT misc_feature complement(1410726..1410846) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 92.000~" FT misc_feature 1500816..1500876 FT /note="NOTE: Shatter libraries failed to verify FT dinucleotide repeat region 90640-90700. Unsure number of FT repeat copies 95161-95201. Forced join 90674." FT repeat_region complement(1563809..1564075) FT /rpt_family="AluJb" FT repeat_region 1564100..1564237 FT /rpt_family="MIR" FT repeat_region 1564250..1564550 FT /rpt_family="AluSx" FT repeat_region 1565109..1565230 FT /rpt_family="FLAM_C" FT repeat_region 1565259..1565558 FT /rpt_family="AluSx" FT repeat_region 1567073..1567199 FT /rpt_family="GC_rich" FT repeat_region complement(1567232..1567279) FT /rpt_family="GC_rich" FT repeat_region complement(1567322..1567431) FT /rpt_family="GC_rich" FT repeat_region complement(1567578..1567608) FT /rpt_family="GC_rich" FT repeat_region 1567627..1567733 FT /rpt_family="(CGG)n" FT repeat_region complement(1567760..1567844) FT /rpt_family="(CGG)n" FT repeat_region 1567853..1567960 FT /rpt_family="(CGG)n" FT repeat_region complement(1567985..1568156) FT /rpt_family="(CGG)n" FT repeat_region 1568164..1568328 FT /rpt_family="(CGG)n" FT repeat_region 1568346..1568518 FT /rpt_family="GC_rich" FT repeat_region 1569235..1569533 FT /rpt_family="AluSg" FT repeat_region complement(1570011..1570203) FT /rpt_family="(GAAA)n" FT repeat_region complement(1570184..1570299) FT /rpt_family="(GGAA)n" FT repeat_region complement(1570300..1570545) FT /rpt_family="AluY" FT repeat_region complement(1570554..1570859) FT /rpt_family="7SLRNA" FT repeat_region complement(1570860..1570991) FT /rpt_family="AluJo" FT repeat_region 1571025..1571324 FT /rpt_family="AluSx" FT repeat_region complement(1571371..1571789) FT /rpt_family="MLT1C" FT repeat_region complement(1571957..1572258) FT /rpt_family="AluSx" FT repeat_region complement(1572430..1572728) FT /rpt_family="AluSx" FT repeat_region complement(1572731..1573022) FT /rpt_family="AluSx" FT repeat_region 1573025..1573210 FT /rpt_family="AluJb" FT repeat_region 1573214..1573523 FT /rpt_family="AluSq" FT repeat_region 1573809..1574021 FT /rpt_family="AluSq" FT repeat_region 1574040..1574307 FT /rpt_family="AluSq" FT repeat_region complement(1574337..1574627) FT /rpt_family="L1MB7" FT repeat_region 1575157..1575423 FT /rpt_family="AluSq" FT repeat_region 1576004..1576129 FT /rpt_family="(GA)n" FT misc_feature 1576674..1577471 FT /note="DDS similarity to overlapping ESTs: ~(17305..17742) FT AI027281 ov93a06.x1 Soares_testis_NHT Homo sapiens cDNA FT clone IMAGE:1644850 3'; Score: 860 Identity: 434/438 FT (99%); ~(17308..17776) AI159834 qb51a06.x1 NCI_CGAP_Brn23 FT Homo sapiens cDNA clone IMAGE:1703602 3', mRNA sequence FT [Homo sapiens]; Score: 916 Identity: 472/473 (99%); FT ~(17308..17779) AI086071 oz44g10.x1 Soares_NhHMPu_S1 Homo FT sapiens cDNA clone IMAGE:1678242 3'; Score: 921 Identity: FT 471/485 (97%); ~(17309..17802) AA922032 om45a07.s1 FT Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1543956 FT 3'; Score: 968 Identity: 489/494 (98%); ~(17308..17807) FT AA865604 og93e07.s1 NCI_CGAP_Kid5 Homo sapiens cDNA clone FT IMAGE:1455876 3'; Score: 962 Identity: 495/500 (99%); FT ~(18102..17655) AA279561 zs92a09.r1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone IMAGE:704920 5'; Score: 834 Identity: FT 440/442 (99%).~~And many others." FT mRNA complement(join(1576678..1578537,1581091..1581268, FT 1582621..1582711,1584539..1584676,1585054..1585213, FT 1592521..1592652)) FT /product="Homo sapiens methyl-CpG binding protein MBD3 FT (MBD3) mRNA, complete cds." FT CDS complement(join(1578339..1578537,1581091..1581268, FT 1582621..1582711,1584539..1584676,1585054..1585213, FT 1592521..1592630)) FT /codon_start=1 FT /product="methyl-CpG binding protein MBD3" FT /protein_id="AAC72104.1" FT /translation="MERKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRS FT KPQLARYLGGSMDLSTFDFRTGKMLMSKMNKSRQRVRYDSSNQVKGKPDLNTALPVRQT FT ASIFKQPVTKITNHPSNKVKSDPQKAVDQPRQLFWEKKLSGLNAFDIAEELVKTMDLPK FT GLQGVGPGCTDETLLSAIASALHTSTMPITGQLSAAVEKNPGVWLNTTQPLCKAFMVTD FT EDIRKQEELVQQVRKRLEEALMADMLAHVEELARDGEAPLDKACAEDDDEEDEEEEEEE FT PDPDPEMEHV" FT repeat_region complement(1578372..1578413) FT /rpt_family="(GGA)n" FT repeat_region 1578914..1579202 FT /rpt_family="AluSx" FT repeat_region complement(1579780..1580056) FT /rpt_family="AluSx" FT repeat_region 1581460..1581729 FT /rpt_family="AluJb" FT repeat_region complement(1581769..1582065) FT /rpt_family="AluY" FT repeat_region complement(1582070..1582200) FT /rpt_family="AluJb" FT repeat_region 1582931..1583223 FT /rpt_family="AluSq" FT repeat_region 1583224..1583406 FT /rpt_family="AluSg/x" FT repeat_region complement(1583476..1583557) FT /rpt_family="MER2" FT repeat_region 1583575..1583713 FT /rpt_family="AluJb" FT repeat_region complement(1583823..1584123) FT /rpt_family="AluSx" FT repeat_region complement(1584124..1584233) FT /rpt_family="MER2" FT repeat_region complement(1584237..1584442) FT /rpt_family="AluJo" FT repeat_region 1584700..1584873 FT /rpt_family="GC_rich" FT repeat_region 1586212..1586508 FT /rpt_family="L1MB7" FT repeat_region complement(1586510..1586667) FT /rpt_family="AluJ" FT repeat_region complement(1586671..1586965) FT /rpt_family="AluSx" FT repeat_region complement(1586969..1587263) FT /rpt_family="AluY" FT repeat_region complement(1587264..1587396) FT /rpt_family="AluJ" FT repeat_region complement(1587410..1587707) FT /rpt_family="AluJo" FT repeat_region 1588499..1588797 FT /rpt_family="AluSx" FT repeat_region 1588839..1589034 FT /rpt_family="L1MB8" FT repeat_region 1589057..1589363 FT /rpt_family="AluSp" FT repeat_region 1589373..1589669 FT /rpt_family="AluSx" FT repeat_region 1589672..1589852 FT /rpt_family="AluJo" FT repeat_region 1589858..1590022 FT /rpt_family="L1MB6" FT repeat_region 1590025..1590305 FT /rpt_family="AluSq" FT repeat_region 1590341..1590626 FT /rpt_family="AluJb" FT repeat_region 1590627..1590670 FT /rpt_family="L1MB6" FT repeat_region 1591118..1591153 FT /rpt_family="LINE2" FT repeat_region complement(1592417..1592512) FT /rpt_family="GC_rich" FT repeat_region complement(1592649..1592768) FT /rpt_family="(CGG)n" FT repeat_region complement(1592749..1592873) FT /rpt_family="(CGGG)n" FT repeat_region complement(1592874..1592914) FT /rpt_family="GC_rich" FT repeat_region complement(1593280..1593546) FT /rpt_family="AluSx" FT repeat_region complement(1593878..1593968) FT /rpt_family="MLT1D" FT repeat_region complement(1593997..1594026) FT /rpt_family="(CAAT)n" FT repeat_region complement(1594028..1594309) FT /rpt_family="AluSx" FT repeat_region complement(1594653..1594827) FT /rpt_family="AluSq" FT repeat_region complement(1594832..1594972) FT /rpt_family="AluSp" FT repeat_region complement(1595031..1595187) FT /rpt_family="AluSp" FT repeat_region 1595205..1595281 FT /rpt_family="AluJ/FRAM" FT repeat_region 1595318..1595414 FT /rpt_family="L1MB6" FT repeat_region 1595399..1595505 FT /rpt_family="L1MD3" FT repeat_region 1595548..1595849 FT /rpt_family="AluY" FT repeat_region complement(1596157..1596384) FT /rpt_family="AluJo" FT repeat_region 1596456..1596752 FT /rpt_family="AluSx" FT repeat_region 1596760..1596920 FT /rpt_family="AluSg/x" FT repeat_region 1596921..1596990 FT /rpt_family="MLT1B" FT repeat_region complement(1597040..1597333) FT /rpt_family="FLAM_C" FT repeat_region 1597459..1597871 FT /rpt_family="MLT1F" FT misc_feature complement(1598048..1598214) FT /note="DDS similarity to EST (38845..38679) AI095447 FT qb19c08.x1 Soares_pregnant_uterus_NbHPU Homo sapiens cDNA FT clone IMAGE:1696718 3' similar to TR:O14957 O14957 SMALLEST FT SUBUNIT OF UBIQUINOL-CYTOCHROME C REDUCTASE; (167..1) 100% FT identity.~~Additional EST matches: AI216756, AI168174, FT AI220145, T24631" FT mRNA complement(join(1598048..1598214,1599411..>1599558)) FT /product="Homo sapiens mRNA for smallest subunit of FT ubiquinol-cytochrome c reductase, partial cds." FT repeat_region 1598262..1598560 FT /rpt_family="AluSp" FT repeat_region 1598561..1598721 FT /rpt_family="AluSc" FT misc_feature complement(1599411..1599559) FT /note="DDS similarity to EST (40190..40042) AI095447 FT qb19c08.x1 Soares_pregnant_uterus_NbHPU Homo sapiens cDNA FT clone IMAGE:1696718 3' similar to TR:O14957 O14957 SMALLEST FT SUBUNIT OF UBIQUINOL-CYTOCHROME C REDUCTASE; (316..168) FT 100% identity.~~Additional EST matches: AI220145, T34310" FT CDS complement(1599439..>1599558) FT /codon_start=1 FT /product="smallest subunit of ubiquinol-cytochrome c FT reductase" FT /protein_id="AAC72105.1" FT /translation="VPTAYTWGAVGAVGLVWATDWRLILDWVPYINGKFKKDN" FT repeat_region complement(1599915..1600051) FT /rpt_family="MIR" FT repeat_region complement(1600212..1600511) FT /rpt_family="AluY" FT repeat_region 1600599..1600883 FT /rpt_family="AluJo" FT repeat_region 1600886..1601183 FT /rpt_family="AluSx" FT repeat_region 1601225..1601307 FT /rpt_family="MLT1F" FT repeat_region 1601320..1601615 FT /rpt_family="AluY" FT repeat_region 1601621..1601824 FT /rpt_family="MLT1E" FT repeat_region 1601879..1602174 FT /rpt_family="AluSx" FT misc_feature complement(1602330..1602425) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(1602450..1602750) FT /rpt_family="AluSx" FT misc_feature complement(1602650..1602676) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 71.000" FT repeat_region 1603285..1603318 FT /rpt_family="LINE2" FT repeat_region 1603320..1603625 FT /rpt_family="AluY" FT misc_feature complement(1603796..1603889) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 72.000" FT repeat_region complement(1603943..1604242) FT /rpt_family="AluSp" FT repeat_region complement(1604253..1604292) FT /rpt_family="FLAM" FT repeat_region complement(1604293..1604508) FT /rpt_family="AluJb" FT repeat_region complement(1604525..1604827) FT /rpt_family="AluSx" FT misc_feature 1604972..1605086 FT /note="BLASTN similarity to cpg2e6.ft1ld (1..115); match: FT 0.95, score: 4.0e-37; database searched: Sanger CpG; bases FT 110 to 224 (SL to QR)." FT misc_feature 1604972..1605101 FT /note="BLASTN similarity to Z58136 (1..130); match: 1, FT score: 4.9e-45; database searched: nt; H.sapiens CpG DNA, FT clone 2e6, forward read cpg2e6.f1b ." FT repeat_region complement(1605251..1605275) FT /rpt_family="GC_rich" FT repeat_region complement(1605300..1605351) FT /rpt_family="GC_rich" FT CDS complement(<1605358..1605408) FT /codon_start=1 FT /product="UCRY_HUMAN" FT /note="smallest subunit of ubiquinol-cytochrome c FT reductase, partial CDS" FT /protein_id="AAC27374.1" FT /translation="MVTRFLGPRYRELVKNW" FT misc_feature complement(1605358..1605446) FT /note="BLASTN similarity to D30818 (1..89); match: 1, FT score: 8.6e-28; database searched: est; Human fetal-lung FT cDNA 5'-end sequence.~~BLASTN similarity to D31515 (1..89); FT match: 0.97, score: 5.3e-28; database searched: est; Human FT fetal-lung cDNA 5'-end sequence.~~BLASTN similarity to FT T40162 (1..87); match: 1, score: 4.3e-27; database FT searched: est; ya16e08.r2 Homo sapiens cDNA clone 61670 5' FT similar to SP:UCRY_BOVIN P07552 UBIQUINOL-CYTOCHROME C FT REDUCTASE 6.4 KD" FT misc_feature complement(1605359..1605408) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 94.000" FT repeat_region complement(1605467..1605513) FT /rpt_family="GC_rich" FT repeat_region complement(1605730..1605812) FT /rpt_family="MIR" FT repeat_region complement(1606583..1606872) FT /rpt_family="AluSx" FT repeat_region 1607086..1607389 FT /rpt_family="AluSp" FT repeat_region complement(1607562..1607854) FT /rpt_family="AluY" FT repeat_region complement(1607860..1607990) FT /rpt_family="FRAM" FT repeat_region complement(1608002..1608298) FT /rpt_family="AluSx" FT repeat_region complement(1608417..1608537) FT /rpt_family="FLAM_C" FT repeat_region complement(1608824..1608905) FT /rpt_family="LINE2" FT misc_feature 1609291..1610272 FT /note="DDS similarity to overlapping ESTs:~(7914..8329) FT AA262386 zs16d03.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:685349 5'; Score: 824 Identity: 414/416 (99%). FT ~~(7915..8467) AA534984 nf73h04.s1 NCI_CGAP_Co3 Homo FT sapiens cDNA clone IMAGE:925591; Score: 1050 Identity: FT 545/551 (98%).~~(7914..8472) AA047004 zf14a10.s1 Soares FT fetal heart NbHH19W Homo sapiens cDNA clone 376890 3'; FT Score: 1092 Identity: 555/557 (99%).~~(7916..8333)T28872 FT EST58410 Homo sapiens cDNA 3' end similar to transcription FT factor E2A (HT:1359); Score: 816 Identity: 413/418 FT (98%).~~(8513..8053) AA464087 zx82g08.r1 Soares ovary tumor FT NbHOT Homo sapiens cDNA clone 810302 5'; Score: 901 FT Identity: 457/460 (99%).~~(8513..8080) AA291366 zt44b01.r1 FT Soares ovary tumor NbHOT Homo sapiens cDNA clone 725161 5'; FT Score: 860 Identity: 432/434 (99%).~~(8616..8111) AA046833 FT zf14a10.r1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 376890 5' similar to contains element TAR1 repetitive FT element ; Score: 955 Identity: 493/505 FT (97%).~~(8895..8608) AA339953 EST45121 Fetal skin Homo FT sapiens cDNA 5' end similar to transcription factor E2A; FT Score: 556 Identity: 283/288 (98%).~~And many others..." FT mRNA complement(1609293..>1632405) FT /product="Human transcription factor (E2A) mRNA" FT repeat_region complement(1609415..1609441) FT /rpt_family="AT_rich" FT misc_feature complement(1610439..1610499) FT /note="DDS similarity to ~AA639838 nq85a12.s1 NCI_CGAP_Co9 FT Homo sapiens cDNA clone IMAGE:1159102 similar to gb:M74719 FT TRANSCRIPTION FACTOR ITF-2 (HUMAN); (486..546); 100% FT identity." FT repeat_region complement(1610922..1610947) FT /rpt_family="GC_rich" FT misc_feature 1610964..1611654 FT /note="DDS similarity to overlapping ESTs:~(9587..10010) FT AA442932 zv69h04.r1 Soares total fetus Nb2HF8 9w Homo FT sapiens cDNA clone 758935 5'; Score: 812 Identity: 424/428 FT (99%).~~(9794..10244) AA788849 zf25c07.s1 Soares fetal FT heart NbHH19W Homo sapiens cDNA clone 377964 3'; Score: 851 FT Identity: 443/452 (98%).~~(9813..10277) AA459634 FT zx89g10.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 810978 5'; Score: 930 Identity: 465/465 (100%)." FT misc_feature complement(1611056..1611382) FT /note="BLASTN similarity to M65214 (748..1074); match: 1, FT score: 0.0; database searched: nt; Human (HeLa) FT helix-loop-helix protein HE47 (E2A) mRNA, 3' end." FT misc_feature complement(1611161..1611368) FT /note="DDS similarity to overlapping ESTs:~(9991..9784) FT AA176379 zp30h09.s1 Stratagene neuroepithelium (#937231) FT Homo sapiens cDNA clone 611009 3' similar to gb:M74719 FT TRANSCRIPTION FACTOR ITF-2 (HUMAN); (208..9); 100% FT identity.~" FT misc_feature 1611167..1611402 FT /note="BLASTN similarity to T47792 (2..237); match: 1, FT score: 5.6e-124; database searched: est; yb17b03.s1 Homo FT sapiens cDNA clone 71405 3'." FT misc_feature complement(1611375..1611852) FT /note="BLASTN similarity to M65214 (280..757); match: 0.99, FT score: 0.0; database searched: nt; Human (HeLa) FT helix-loop-helix protein HE47 (E2A) mRNA, 3' end." FT misc_feature 1611435..1611520 FT /note="BLASTN similarity to T47792 (272..357); match: 0.84, FT score: 5.6e-124; database searched: est; yb17b03.s1 Homo FT sapiens cDNA clone 71405 3'." FT misc_feature 1611543..1611577 FT /note="BLASTN similarity to T47792 (385..419); match: 0.97, FT score: 5.6e-124; database searched: est; yb17b03.s1 Homo FT sapiens cDNA clone 71405 3'." FT misc_feature complement(1611703..1611848) FT /gene="TCF3" FT /note="DDS similarity to overlapping ESTs:~AA639838 FT nq85a12.s1 NCI_CGAP_Co9 Homo sapiens cDNA clone FT IMAGE:1159102 similar to gb:M74719 TRANSCRIPTION FACTOR FT ITF-2 (HUMAN); (339..485); 97% identity.~~AA176379 FT zp30h09.s1 Stratagene neuroepithelium (#937231) Homo FT sapiens cDNA clone 611009 3' similar to gb:M74719 FT TRANSCRIPTION FACTOR ITF-2 (HUMAN); (352..209); 98% FT identity.~~(10471..10199) AA448433 zw96e10.r1 Soares total FT fetus Nb2HF8 9w Homo sapiens cDNA clone 784842 5' similar FT to gb:M74719 TRANSCRIPTION FACTOR ITF-2 (HUMAN); (273..1); FT 99% identity.~~(10471..10357) AA563669 ng49d12.s1 FT NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:938135 similar FT to gb:M74719 TRANSCRIPTION FACTOR ITF-2 (HUMAN); FT (348..461); 99% identity.~~~(10471..10389) predicted exon, FT program: grail2exons_human_1.3, frame: 1, quality: FT excellent, score: 77.000" FT CDS complement(join(1611706..1611848,1615284..1615519, FT 1615685..1615820,1619110..1619233,1619315..1619473, FT 1619779..1619852,1620967..1621045,1621132..1621190, FT 1621837..1621969,1622053..1622222,1622312..1622414, FT 1623950..1623999,1625575..1625707,1627358..1627425, FT 1632037..1632115,1632331..>1632405)) FT /codon_start=1 FT /gene="TCF3" FT /product="TFE2_HUMAN" FT /note="TRANSCRIPTION FACTOR E2-ALPHA; IMMUNOGLOBULIN FT ENHANCER BINDING; TRANSCRIPTION FACTOR-3; TCF-3; FT TRANSCRIPTION FACTOR ITF-1" FT /protein_id="AAC27373.1" FT /translation="GLEDRPSSGSWGSGDQSSSSFDPSRTFSEGTHFTESHSSLSSSTF FT LGPGLGGKSGERGAYASFGRDAGVGGLTQAGFLSGELALNSPGPLSPSGMKGTSQYYPS FT YSGSSRRRAADGSLDTQPKKVRKVPPGLPSSVYPPSSGEDYGRDATAYPSAKTPSSTYP FT APFYVADGSLHPSAELWSPPGQAGFGPMLGGGSSPLPLPPGSGPVGSSGSSSTFGGLHQ FT HERMGYQLHGAEVNGGLPSASSFSSAPGATYGGVSSHTPPVSGADSLLGSRGTTAGSSG FT DALGKALASIYSPDHSSNNFSSSPSTPVGSPQGLAGTSQWPRAGAPGALSPSYDGGLHG FT LQSKIEDHLDEAIHVLRSHAVGTAGDMHTLLPGHGALASGFTGPMSLGGRHAGLVGGSH FT PEDGLAGSTSLMHNHAALPSQPGTLPDLSRPPDSYSGLGRAGATAAASEIKREEKEDEE FT NTSAADHSEEEKKELKAPRARTSPDEDEDDLLPPEQKAEREKERRVANNARERLRVRDI FT NEAFKELGRMCQLHLNSEKPQTKLLILHQAVSVILNLEQQVRERNLNPKAACLKRREEE FT KVSGVVGDPQMVLSAPHPGLSEAHNPAGHM" FT misc_feature complement(1612213..1612432) FT /gene="TCF3" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA639838 nq85a12.s1 FT NCI_CGAP_Co9 Homo sapiens cDNA clone IMAGE:1159102 similar FT to gb:M74719 TRANSCRIPTION FACTOR ITF-2 (HUMAN); FT (113..338); 99% identity.~~(11055..10855) AA977695 FT on32d09.s1 NCI_CGAP_Lu5 Homo sapiens cDNA clone FT IMAGE:1558385 3' similar to gb:M74719 TRANSCRIPTION FACTOR FT ITF-2 (HUMAN);contains TAR1.t2 TAR1 repetitive element ; FT (286..485); 99% identity." FT repeat_region 1613986..1614134 FT /rpt_family="MIR" FT misc_feature complement(1615284..1615519) FT /gene="TCF3" FT /note="DDS similarity to overlapping ESTs:~(14142..13907) FT AA563669 ng49d12.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:938135 similar to gb:M74719 TRANSCRIPTION FACTOR FT ITF-2 (HUMAN); (112..347); 97% identity.~~(14009..13907) FT AA176379 zp30h09.s1 Stratagene neuroepithelium (#937231) FT Homo sapiens cDNA clone 611009 3' similar to gb:M74719 FT TRANSCRIPTION FACTOR ITF-2 (HUMAN); (455..353); 99% FT identity.~~(14111..13907) AA448433 zw96e10.r1 Soares total FT fetus Nb2HF8 9w Homo sapiens cDNA clone 784842 5' similar FT to gb:M74719 TRANSCRIPTION FACTOR ITF-2 (HUMAN); FT (478..274); 99% identity.~~(14107..13907) AA977695 FT on32d09.s1 NCI_CGAP_Lu5 Homo sapiens cDNA clone FT IMAGE:1558385 3' similar to gb:M74719 TRANSCRIPTION FACTOR FT ITF-2 (HUMAN);contains TAR1.t2 TAR1 repetitive element; FT (85.. 285); 100% identity.~~(14137..13907) predicted exon, FT program: grail2exons_human_1.3, frame: 1, quality: FT excellent, score: 100.000" FT misc_feature complement(1615435..1615491) FT /gene="TCF3" FT /note="BLASTN similarity to T47827 (1..57); match: 0.87, FT score: 5.2e-73; database searched: est; yb17d03.r1 Homo FT sapiens cDNA clone 71429 5' similar to gb:M74719 FT TRANSCRIPTION FACTOR ITF-2 (HUMAN)." FT misc_feature complement(1615685..1615740) FT /gene="TCF3" FT /note="BLASTN similarity to AI032639 (1..56); match: 0.96, FT score: 4.9e-108; database searched: month.na; ow17h06.x1 FT Soares_parathyroid_tumor_NbHPA Homo sapiens cDNA clone FT IMAGE:1647131 3' similar to gb:M74719 TRANSCRIPTION" FT misc_feature complement(1615685..1615820) FT /gene="TCF3" FT /note="(14437..14308) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 95.000~~DDS similarity to overlapping ESTs:~(14443..14413) FT AA251379 zs09h11.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:684741 3' similar to gb:M31522 TRANSCRIPTION FACTOR FT ITF-1 (HUMAN); (31..1); 100% identity.~~(14443..14412) FT AA284826 zt22c03.s1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 713860 3' similar to gb:M31522 TRANSCRIPTION FT FACTOR ITF-1 (HUMAN); (32..1); 94% FT identity.~~(14420..14308) AA639838 nq85a12.s1 NCI_CGAP_Co9 FT Homo sapiens cDNA clone IMAGE:1159102 similar to gb:M74719 FT TRANSCRIPTION FACTOR ITF-2 (HUMAN); (1..112); 98% FT identity.~~(14420..14308) AA563669 ng49d12.s1 NCI_CGAP_Co3 FT Homo sapiens cDNA clone IMAGE:938135 similar to gb:M74719 FT TRANSCRIPTION FACTOR ITF-2 (HUMAN); (1..111); 95% FT identity.~~(14391..14308) AA977695 on32d09.s1 NCI_CGAP_Lu5 FT Homo sapiens cDNA clone IMAGE:1558385 3' similar to FT gb:M74719 TRANSCRIPTION FACTOR ITF-2 (HUMAN);contains FT TAR1.t2 TAR1 repetitive element; (1..84); ~96% identity." FT repeat_region complement(1615704..1615778) FT /rpt_family="(GGA)n" FT repeat_region 1615964..1616061 FT /rpt_family="L1" FT repeat_region 1616206..1616492 FT /rpt_family="AluY" FT repeat_region complement(1616493..1616566) FT /rpt_family="U6" FT repeat_region 1616567..1616786 FT /rpt_family="AluJb" FT repeat_region 1616944..1617104 FT /rpt_family="L1MC/D" FT repeat_region complement(1617751..1617919) FT /rpt_family="MER20" FT repeat_region 1618180..1618689 FT /rpt_family="LINE2" FT misc_feature complement(1619038..1619233) FT /gene="TCF3" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 53.000~~DDS similarity to FT overlapping ESTs:~AA284826 zt22c03.s1 Soares ovary tumor FT NbHOT Homo sapiens cDNA clone 713860 3' similar to FT gb:M31522 TRANSCRIPTION FACTOR ITF-1 (HUMAN); (156..33); FT 100% identity.~~(17856..17732) AA251176 zs04h04.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:684247 3' FT similar to gb:M95586 TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); FT (153..29); 100% identity.~~And many others.." FT misc_feature complement(1619315..1619473) FT /gene="TCF3" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 99.000~~DDS similarity FT to overlapping ESTs:~(18096..17938) AA284826 zt22c03.s1 FT Soares ovary tumor NbHOT Homo sapiens cDNA clone 713860 3' FT similar to gb:M31522 TRANSCRIPTION FACTOR ITF-1 (HUMAN); FT (312..157); 98% identity.~~(18096..17733) AA251379 FT zs09h11.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:684741 3' similar to gb:M31522 TRANSCRIPTION FACTOR FT ITF-1 (HUMAN); (390..1); 99% identity.~~(18096..17947) FT AA284598 zt22c03.r1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 713860 5' similar to gb:M95586 TRANSCRIPTION FT FACTOR E2-ALPHA (HUMAN); (339..487); 97% FT identity.~~(18093..17938) AA251176 zs04h04.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:684247 3' similar to FT gb:M95586 TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); FT (308..154); 97% identity.~~and many others..." FT misc_feature complement(1619779..1619852) FT /gene="TCF3" FT /note="DDS similarity to overlapping ESTs:~AA284826 FT zt22c03.s1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 713860 3' similar to gb:M31522 TRANSCRIPTION FACTOR ITF-1 FT (HUMAN); (386..313); 100% identity.~~AA251379 zs09h11.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:684741 3' FT similar to gb:M31522 TRANSCRIPTION FACTOR ITF-1 (HUMAN); FT (466..391); 98% identity.~~AA251176 zs04h04.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:684247 3' FT similar to gb:M95586 TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); FT (382..309); 100% identity.~~AA284598 zt22c03.r1 Soares FT ovary tumor NbHOT Homo sapiens cDNA clone 713860 5' similar FT to gb:M95586 TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); FT (265..338); 100% identity.~~And many others..." FT repeat_region 1620061..1620092 FT /rpt_family="MIR" FT misc_feature 1620955..1621033 FT /gene="TCF3" FT /note="BLASTN similarity to AI027246 (377..455); match: FT 0.92, score: 7.4e-130; database searched: month.na; FT ov89b04.x1 Soares_testis_NHT Homo sapiens cDNA clone FT IMAGE:1644463 3' similar to gb:M31522 TRANSCRIPTION FACTOR FT ITF-1" FT misc_feature complement(1620967..1621045) FT /gene="TCF3" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: marginal, score: 49.000~~DDS similarity FT to overlapping ESTs:~AA284826 zt22c03.s1 Soares ovary tumor FT NbHOT Homo sapiens cDNA clone 713860 3' similar to FT gb:M31522 TRANSCRIPTION FACTOR ITF-1 (HUMAN); (463..387); FT 97% identity.~~AA251176 zs04h04.s1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone IMAGE:684247 3' similar to gb:M95586 FT TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); (461..383); 100% FT identity.~~AA284598 zt22c03.r1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 713860 5' similar to gb:M95586 FT TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); (186..264); 97% FT identity." FT misc_feature complement(1621132..1621190) FT /gene="TCF3" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 69.000~~DDS similarity to FT overlapping ESTs:~AA251176 zs04h04.s1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone IMAGE:684247 3' similar to gb:M95586 FT TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); (520..462); 100% FT identity.~~AA284598 zt22c03.r1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 713860 5' similar to gb:M95586 FT TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); (127..185); 100% FT identity.~~(19783..19755) AA284826 zt22c03.s1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 713860 3' similar to FT gb:M31522 TRANSCRIPTION FACTOR ITF-1 (HUMAN); (489..464); FT 88% identity." FT repeat_region 1621564..1621624 FT /rpt_family="MIR" FT misc_feature complement(1621837..1621969) FT /gene="TCF3" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 77.000~~DDS similarity FT to overlapping ESTs:~(20592..20504) A219726 zq98e03.r1 FT Stratagene NT2 neuronal precursor 937230 Homo sapiens cDNA FT clone 650044 5' similar to gb:M95586 TRANSCRIPTION FACTOR FT E2-ALPHA (HUMAN); (362..450); 97% identity.~(20585..20460) FT AA284598 zt22c03.r1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 713860 5' similar to gb:M95586 TRANSCRIPTION FT FACTOR E2-ALPHA (HUMAN); (1..126); 100% identity." FT misc_feature complement(1622053..1622222) FT /gene="TCF3" FT /note="DDS similarity to AA219726 zq98e03.r1 Stratagene NT2 FT neuronal precursor 937230 Homo sapiens cDNA clone 650044 5' FT similar to gb:M95586 TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); FT (189..361); 95% identity.~~(20739..20676) predicted exon, FT program: grail2exons_human_1.3, frame: 1, quality: good, FT score: 71.000" FT misc_feature complement(1622312..1622414) FT /gene="TCF3" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA219726 zq98e03.r1 FT Stratagene NT2 neuronal precursor 937230 Homo sapiens cDNA FT clone 650044 5' similar to gb:M95586 TRANSCRIPTION FACTOR FT E2-ALPHA (HUMAN); (87..188); 99% identity.~~(21037..20980) FT AA554346 nl03f02.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:1029243 similar to gb:M95586 TRANSCRIPTION FACTOR FT E2-ALPHA (HUMAN); (91..17); 99% identity." FT repeat_region complement(1623382..1623681) FT /rpt_family="AluSx" FT misc_feature complement(1623950..1623999) FT /gene="TCF3" FT /note="DDS similarity to overlapping ESTs:~AA219726 FT zq98e03.r1 Stratagene NT2 neuronal precursor 937230 Homo FT sapiens cDNA clone 650044 5' similar to gb:M95586 FT TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); (38..86); 98% FT identity.~~AA554346 nl03f02.s1 NCI_CGAP_Co3 Homo sapiens FT cDNA clone IMAGE:1029243 similar to gb:M95586 TRANSCRIPTION FT FACTOR E2-ALPHA (HUMAN); (140..90); 96% identity." FT repeat_region 1624115..1624402 FT /rpt_family="AluSc" FT repeat_region complement(1624785..1624850) FT /rpt_family="MER82" FT repeat_region complement(1624853..1625144) FT /rpt_family="AluJo" FT repeat_region complement(1625145..1625242) FT /rpt_family="MER82" FT misc_feature complement(1625575..1625707) FT /gene="TCF3" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA554346 nl03f02.s1 FT NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:1029243 similar FT to gb:M95586 TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); FT (273..141); 98% identity.~~(24234..24198) AA219726 FT zq98e03.r1 Stratagene NT2 neuronal precursor 937230 Homo FT sapiens cDNA clone 650044 5' similar to gb:M95586 FT TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); (1..37); 86% FT identity." FT repeat_region 1626168..1626464 FT /rpt_family="AluSp" FT misc_feature complement(1627358..1627425) FT /gene="TCF3" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 96.000~~DDS similarity FT to AA554346 nl03f02.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:1029243 similar to gb:M95586 TRANSCRIPTION FACTOR FT E2-ALPHA (HUMAN); (341..274); 100% identity." FT repeat_region complement(1631133..1631230) FT /rpt_family="MIR" FT repeat_region complement(1631266..1631567) FT /rpt_family="AluSx" FT misc_feature complement(1632037..1632115) FT /gene="TCF3" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 90.000~~DDS similarity FT to AA554346 nl03f02.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:1029243 similar to gb:M95586 TRANSCRIPTION FACTOR FT E2-ALPHA (HUMAN); (420..342); 100% identity." FT misc_feature complement(1632331..1632404) FT /gene="TCF3" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 93.000~~(30979..30954) FT DDS similarity to AA554346 nl03f02.s1 NCI_CGAP_Co3 Homo FT sapiens cDNA clone IMAGE:1029243 similar to gb:M95586 FT TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); (446..421); 100% FT identity." FT repeat_region complement(1633086..1633109) FT /rpt_family="GC_rich" FT repeat_region complement(1634753..1634968) FT /rpt_family="MER58A" FT repeat_region 1635345..1635452 FT /rpt_family="LINE2" FT repeat_region 1635630..1635693 FT /rpt_family="MER3" FT misc_feature 1635932..1636095 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 78.000" FT repeat_region complement(1636162..1636457) FT /rpt_family="AluSq" FT repeat_region complement(1636473..1636581) FT /rpt_family="FLAM_C" FT repeat_region 1637627..1637927 FT /rpt_family="AluY" FT repeat_region complement(1638212..1638293) FT /rpt_family="MIR" FT repeat_region complement(1638356..1638386) FT /rpt_family="(CAAA)n" FT repeat_region complement(1638396..1638535) FT /rpt_family="AluY" FT repeat_region complement(1638691..1638726) FT /rpt_family="tRNA-His-CAC" FT repeat_region complement(1639050..1639342) FT /rpt_family="AluSx" FT repeat_region 1639737..1639781 FT /rpt_family="POLY_A" FT repeat_region 1640161..1640203 FT /rpt_family="Alu" FT repeat_region 1640253..1640314 FT /rpt_family="AluJ/FLAM" FT repeat_region 1640253..1640389 FT /rpt_family="AluY" FT repeat_region 1640396..1640460 FT /rpt_family="MIR" FT repeat_region 1640544..1640817 FT /rpt_family="AluY" FT repeat_region 1640866..1641176 FT /rpt_family="AluSq" FT repeat_region 1641187..1641332 FT /rpt_family="L1MD2" FT repeat_region 1641334..1641454 FT /rpt_family="AluJo/FLAM" FT repeat_region complement(1641457..1641750) FT /rpt_family="AluSx" FT repeat_region complement(1641756..1641891) FT /rpt_family="FLAM_C" FT repeat_region 1641921..1642056 FT /rpt_family="AluJo/FRAM" FT repeat_region 1642129..1642267 FT /rpt_family="(CA)n" FT repeat_region 1642268..1642326 FT /rpt_family="(CA)n" FT repeat_region 1642327..1642459 FT /rpt_family="L1MD2" FT repeat_region complement(1642667..1642770) FT /rpt_family="AluSq/x" FT repeat_region 1642806..1642848 FT /rpt_family="L1ME" FT repeat_region complement(1643218..1643519) FT /rpt_family="AluJo" FT repeat_region complement(1643521..1643677) FT /rpt_family="FRAM" FT repeat_region complement(1643701..1643723) FT /rpt_family="AT_rich" FT repeat_region 1645491..1645620 FT /rpt_family="LINE2" FT repeat_region complement(1645760..1645873) FT /rpt_family="MER81" FT misc_feature complement(1646290..1646426) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 76.000" FT mRNA complement(join(1646354..1646426,1650176..1650277)) FT /product="Human transcription factor (E2A) mRNA" FT CDS complement(join(<1646354..1646426,1650176..1650247)) FT /codon_start=1 FT /gene="TCF3" FT /product="transcription factor E2A [AA 1-48]" FT /note="homeobox gene product involved in t(1;19) FT translocation protein in pre-B ALL; TFE2_HUMAN; FT transcription factor e2-alpha; immunoglobulin enhancer FT binding factore12; transcription factor-3; tcf-3; FT transcription factor itf-1" FT /protein_id="AAC99797.1" FT /translation="MNQPQRMAPVGTDKELSDLLDFSMMFPLPVTNGKGRPASLAGAQF FT GGS" FT misc_feature complement(1646356..1646426) FT /gene="TCF3" FT /note="DDS similarity to AA504583 aa60f12.r1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:825359 5' similar to FT gb:M95586 TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); FT (193..266); 100% identity.~" FT repeat_region 1647833..1647869 FT /rpt_family="MIR" FT repeat_region complement(1649416..1649721) FT /rpt_family="AluJo" FT repeat_region complement(1649731..1649784) FT /rpt_family="Alu" FT repeat_region complement(1649818..1649869) FT /rpt_family="MIR" FT misc_feature complement(1650176..1650368) FT /note="DDS similarity to AA504583 aa60f12.r1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:825359 5' similar to FT gb:M95586 TRANSCRIPTION FACTOR E2-ALPHA (HUMAN); (1..192); FT 97% identity.~" FT misc_feature 1651026..1651347 FT /note="BLASTN similarity to Z65765 (5..332); match: 0.94, FT score: 6.1e-86; database searched: nt; H.sapiens CpG DNA, FT clone 57f1, reverse read cpg57f1.rt1a ." FT misc_feature complement(1651208..1651504) FT /note="BLASTN similarity to Z65764 (1..299); match: 0.97, FT score: 7.6e-108; database searched: nt; H.sapiens CpG DNA, FT clone 57f1, forward read cpg57f1.ft1a ." FT repeat_region complement(1651791..1651823) FT /rpt_family="GC_rich" FT repeat_region complement(1652266..1652531) FT /rpt_family="GC_rich" FT repeat_region complement(1652535..1652740) FT /rpt_family="(CGG)n" FT repeat_region 1653441..1653550 FT /rpt_family="AluJb" FT repeat_region complement(1653570..1653608) FT /rpt_family="AT_rich" FT repeat_region 1653612..1653913 FT /rpt_family="AluSq" FT repeat_region 1653925..1654106 FT /rpt_family="AluSg/x" FT repeat_region 1654195..1654320 FT /rpt_family="LINE2" FT repeat_region 1654561..1654620 FT /rpt_family="MIR" FT repeat_region complement(1654962..1654997) FT /rpt_family="(GAA)n" FT repeat_region complement(1654999..1655294) FT /rpt_family="AluJo" FT repeat_region 1656388..1656470 FT /rpt_family="FLAM_A" FT repeat_region complement(1656471..1656764) FT /rpt_family="AluSx" FT repeat_region complement(1657240..1657460) FT /rpt_family="LINE2" FT repeat_region 1659092..1659249 FT /rpt_family="LINE2" FT repeat_region complement(1659251..1659278) FT /rpt_family="(CAAA)n" FT repeat_region complement(1659279..1659582) FT /rpt_family="AluSq" FT repeat_region 1659774..1660071 FT /rpt_family="AluJb" FT repeat_region 1660081..1660380 FT /rpt_family="AluSq" FT repeat_region 1660673..1660973 FT /rpt_family="AluY" FT repeat_region complement(1661411..1661699) FT /rpt_family="AluY" FT repeat_region 1661792..1662088 FT /rpt_family="AluJo" FT repeat_region 1662367..1662669 FT /rpt_family="AluSx" FT repeat_region complement(1662714..1662762) FT /rpt_family="POLY_A" FT repeat_region 1662779..1663076 FT /rpt_family="AluY" FT repeat_region 1663077..1663255 FT /rpt_family="AluSq" FT repeat_region complement(1663263..1663545) FT /rpt_family="AluJo" FT repeat_region complement(1663562..1663853) FT /rpt_family="AluSp" FT repeat_region complement(1664280..1664429) FT /rpt_family="(GGGA)n" FT repeat_region complement(1664440..1664740) FT /rpt_family="AluSx" FT repeat_region 1664770..1665082 FT /rpt_family="AluJo" FT repeat_region 1665148..1665448 FT /rpt_family="AluSg" FT repeat_region 1665540..1665587 FT /rpt_family="MER66A" FT repeat_region complement(1666162..1666202) FT /rpt_family="(GGA)n" FT repeat_region complement(1666203..1666504) FT /rpt_family="AluSp" FT repeat_region complement(1666535..1666835) FT /rpt_family="AluY" FT repeat_region complement(1666836..1666977) FT /rpt_family="AluJo" FT repeat_region complement(1666990..1667290) FT /rpt_family="AluY" FT repeat_region 1667351..1667475 FT /rpt_family="LINE2" FT repeat_region 1667631..1667659 FT /rpt_family="LINE2" FT repeat_region complement(1667681..1667720) FT /rpt_family="MIR" FT repeat_region complement(1668004..1668123) FT /rpt_family="(GA)n" FT repeat_region complement(1668094..1668215) FT /rpt_family="(CAGA)n" FT repeat_region complement(1668219..1668358) FT /rpt_family="(GA)n" FT repeat_region complement(1668383..1668503) FT /rpt_family="(GA)n" FT repeat_region complement(1669520..1669659) FT /rpt_family="(GA)n" FT repeat_region complement(1669660..1669705) FT /rpt_family="(GGAA)n" FT repeat_region complement(1669707..1669823) FT /rpt_family="(GA)n" FT repeat_region complement(1669846..1669893) FT /rpt_family="(GGAA)n" FT repeat_region complement(1669894..1670018) FT /rpt_family="(GGGA)n" FT repeat_region complement(1670040..1670167) FT /rpt_family="(GGAA)n" FT repeat_region complement(1670168..1670252) FT /rpt_family="(GGGA)n" FT repeat_region complement(1670253..1670413) FT /rpt_family="AluSq" FT repeat_region complement(1670414..1670720) FT /rpt_family="AluY" FT repeat_region complement(1670721..1670859) FT /rpt_family="AluSq" FT repeat_region complement(1670863..1671036) FT /rpt_family="AluJo" FT repeat_region 1671042..1671335 FT /rpt_family="AluSx" FT repeat_region complement(1671340..1671459) FT /rpt_family="AluJo" FT repeat_region complement(1672593..1672890) FT /rpt_family="AluSg" FT repeat_region complement(1673240..1673325) FT /rpt_family="(CA)n" FT repeat_region complement(1674301..1674398) FT /rpt_family="(GGGA)n" FT repeat_region 1674931..1675221 FT /rpt_family="AluY" FT repeat_region complement(1675752..1675833) FT /rpt_family="MIR" FT repeat_region complement(1675872..1675901) FT /rpt_family="GC_rich" FT repeat_region complement(1676087..1676133) FT /rpt_family="GC_rich" FT repeat_region complement(1676240..1676286) FT /rpt_family="LINE2" FT repeat_region complement(1676395..1676491) FT /rpt_family="MIR" FT repeat_region complement(1676911..1676943) FT /rpt_family="LINE2" FT repeat_region complement(1677222..1677327) FT /rpt_family="MIR" FT repeat_region complement(1677364..1677608) FT /rpt_family="AluSx" FT repeat_region 1692290..1692417 FT /rpt_family="AluSq/x" FT repeat_region complement(1692418..1692702) FT /rpt_family="AluSx" FT repeat_region complement(1692729..1692781) FT /rpt_family="(GAAA)n" FT repeat_region complement(1692782..1693083) FT /rpt_family="AluSq" FT repeat_region complement(1693173..1693404) FT /rpt_family="MLT1D" FT repeat_region complement(1693406..1693680) FT /rpt_family="AluSq" FT repeat_region complement(1693690..1693875) FT /rpt_family="MLT1D" FT repeat_region complement(1694096..1694168) FT /rpt_family="MER45" FT repeat_region complement(1694170..1694207) FT /rpt_family="(CA)n" FT repeat_region complement(1694208..1694456) FT /rpt_family="AluSg" FT repeat_region 1694713..1695022 FT /rpt_family="AluJo" FT repeat_region complement(1695268..1695347) FT /rpt_family="AT_rich" FT repeat_region 1695348..1695490 FT /rpt_family="AluJ" FT repeat_region 1695491..1695797 FT /rpt_family="THE1B" FT repeat_region complement(1695798..1696096) FT /rpt_family="AluY" FT repeat_region 1696100..1696166 FT /rpt_family="THE1B" FT repeat_region 1696167..1696321 FT /rpt_family="AluJ" FT repeat_region complement(1696437..1696731) FT /rpt_family="AluSx" FT repeat_region complement(1696733..1696901) FT /rpt_family="MER58A" FT repeat_region 1696903..1697202 FT /rpt_family="AluY" FT repeat_region 1697679..1697826 FT /rpt_family="AluJo" FT repeat_region 1697829..1698128 FT /rpt_family="AluSp" FT repeat_region 1698131..1698310 FT /rpt_family="AluJo" FT repeat_region complement(1699142..1699171) FT /rpt_family="GC_rich" FT repeat_region complement(1700824..1700950) FT /rpt_family="(GA)n" FT repeat_region complement(1700959..1701072) FT /rpt_family="(GA)n" FT repeat_region complement(1701076..1701257) FT /rpt_family="(GA)n" FT misc_feature 1701552..1701599 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 60.000" FT repeat_region 1701872..1702188 FT /rpt_family="AluSx" FT repeat_region 1702324..1702483 FT /rpt_family="AluJb" FT repeat_region 1702484..1702604 FT /rpt_family="(GAAAA)n" FT repeat_region 1702632..1702752 FT /rpt_family="FLAM_C" FT repeat_region complement(1702761..1703044) FT /rpt_family="AluSg" FT repeat_region 1703291..1703401 FT /rpt_family="(TA)n" FT repeat_region complement(1703403..1703551) FT /rpt_family="(TA)n" FT repeat_region complement(1703552..1703853) FT /rpt_family="AluY" FT repeat_region 1703956..1704245 FT /rpt_family="AluY" FT repeat_region 1704246..1704352 FT /rpt_family="(TAAA)n" FT repeat_region 1704362..1704552 FT /rpt_family="(TGGA)n" FT repeat_region 1704604..1704721 FT /rpt_family="(TGGA)n" FT repeat_region complement(1704722..1704810) FT /rpt_family="MSTB" FT repeat_region complement(1704811..1705106) FT /rpt_family="AluY" FT repeat_region complement(1705107..1705415) FT /rpt_family="MSTB" FT repeat_region 1705423..1705535 FT /rpt_family="(GGGA)n" FT repeat_region 1705541..1705659 FT /rpt_family="(TGGA)n" FT repeat_region 1705664..1705737 FT /rpt_family="(TGGA)n" FT repeat_region 1705741..1705928 FT /rpt_family="(TGGA)n" FT repeat_region 1705949..1706072 FT /rpt_family="(TGGA)n" FT repeat_region 1706081..1706199 FT /rpt_family="(TGGA)n" FT misc_feature 1706466..1706511 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 50.000" FT repeat_region 1706858..1707160 FT /rpt_family="AluSx" FT repeat_region 1707343..1707507 FT /rpt_family="AluJb" FT repeat_region complement(1707658..1707724) FT /rpt_family="MLT1D" FT repeat_region 1707726..1708037 FT /rpt_family="AluSx" FT repeat_region complement(1708040..1708440) FT /rpt_family="MLT1D" FT repeat_region complement(1708538..1708839) FT /rpt_family="AluSx" FT repeat_region complement(1709011..1709174) FT /rpt_family="L1ME3" FT repeat_region 1709175..1709475 FT /rpt_family="AluSx" FT repeat_region complement(1709502..1709663) FT /rpt_family="L1ME3" FT repeat_region complement(1709698..1709947) FT /rpt_family="AluJb" FT repeat_region 1710010..1710308 FT /rpt_family="AluY" FT repeat_region 1710347..1710558 FT /rpt_family="L1" FT repeat_region 1710796..1711078 FT /rpt_family="AluSx" FT repeat_region 1711079..1711250 FT /rpt_family="AluJo" FT repeat_region 1711267..1711305 FT /rpt_family="POLY_A" FT repeat_region 1711519..1711822 FT /rpt_family="AluSx" FT repeat_region complement(1711864..1712047) FT /rpt_family="AluSp" FT repeat_region complement(1712059..1712364) FT /rpt_family="AluSx" FT repeat_region complement(1712374..1712493) FT /rpt_family="FLAM_C" FT repeat_region 1712522..1712817 FT /rpt_family="AluSg" FT repeat_region 1713190..1713410 FT /rpt_family="AluJo" FT repeat_region complement(1713434..1713732) FT /rpt_family="AluSx" FT repeat_region 1713749..1713883 FT /rpt_family="AluSg1" FT repeat_region 1713884..1714183 FT /rpt_family="AluY" FT repeat_region 1714193..1714373 FT /rpt_family="AluSq" FT repeat_region 1714555..1714857 FT /rpt_family="AluSq" FT repeat_region 1715887..1716186 FT /rpt_family="AluSx" FT repeat_region 1716510..1716552 FT /rpt_family="MIR" FT repeat_region 1716744..1716935 FT /rpt_family="(TGGA)n" FT repeat_region 1716909..1717048 FT /rpt_family="(TGAA)n" FT repeat_region 1717055..1717177 FT /rpt_family="(TGGA)n" FT repeat_region 1717218..1717336 FT /rpt_family="(TGGA)n" FT repeat_region 1717338..1717455 FT /rpt_family="(TGGA)n" FT repeat_region 1717456..1717589 FT /rpt_family="(TGAA)n" FT repeat_region 1717590..1717687 FT /rpt_family="(TGGA)n" FT repeat_region 1717693..1717885 FT /rpt_family="(TGGA)n" FT repeat_region 1717978..1718099 FT /rpt_family="(TGGA)n" FT repeat_region 1718100..1718196 FT /rpt_family="(TGGA)n" FT repeat_region 1718216..1718331 FT /rpt_family="(TAGG)n" FT repeat_region complement(1718703..1718831) FT /rpt_family="(GGGA)n" FT repeat_region 1719321..1719613 FT /rpt_family="AluSx" FT repeat_region 1719651..1719740 FT /rpt_family="MIR" FT misc_feature complement(1720398..1720492) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 76.000" FT repeat_region complement(1721357..1721421) FT /rpt_family="MIR" FT repeat_region complement(1721617..1721910) FT /rpt_family="AluSx" FT repeat_region complement(1721979..1722040) FT /rpt_family="MIR" FT repeat_region complement(1722120..1722406) FT /rpt_family="AluSx" FT repeat_region 1722598..1722777 FT /rpt_family="L1MB3" FT repeat_region 1722779..1723076 FT /rpt_family="AluJb" FT repeat_region 1723132..1723433 FT /rpt_family="AluSx" FT repeat_region 1723441..1723601 FT /rpt_family="L1MB7" FT repeat_region 1723979..1724280 FT /rpt_family="AluSp" FT repeat_region complement(1724295..1724416) FT /rpt_family="AluJ" FT repeat_region 1724418..1724718 FT /rpt_family="AluSp" FT repeat_region complement(1724743..1724911) FT /rpt_family="AluJ" FT repeat_region 1724913..1724959 FT /rpt_family="MLT1D" FT repeat_region 1724938..1724997 FT /rpt_family="MLT1B" FT repeat_region complement(1725001..1725293) FT /rpt_family="AluJo" FT repeat_region complement(1725297..1725407) FT /rpt_family="AluJo/FLAM" FT repeat_region complement(1725690..1725923) FT /rpt_family="GC_rich" FT repeat_region complement(1726161..1726274) FT /rpt_family="MIR" FT repeat_region 1726410..1726772 FT /rpt_family="L1PA16" FT repeat_region 1726795..1727095 FT /rpt_family="AluSx" FT repeat_region 1727104..1727231 FT /rpt_family="FLAM_C" FT repeat_region complement(1727240..1727528) FT /rpt_family="AluSx" FT repeat_region complement(1727529..1727560) FT /rpt_family="AT_rich" FT misc_feature 1727586..1727638 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 54.000" FT repeat_region complement(1727727..1727755) FT /rpt_family="AT_rich" FT repeat_region complement(1727940..1728232) FT /rpt_family="AluSg" FT repeat_region complement(1728845..1728969) FT /rpt_family="(CA)n" FT repeat_region complement(1728975..1729099) FT /rpt_family="(CA)n" FT repeat_region complement(1729286..1729393) FT /rpt_family="(CA)n" FT repeat_region complement(1729504..1729642) FT /rpt_family="(CA)n" FT repeat_region 1730382..1730414 FT /rpt_family="(CA)n" FT repeat_region 1730515..1730817 FT /rpt_family="AluSq" FT repeat_region 1730819..1730992 FT /rpt_family="AluJb" FT repeat_region 1730994..1731291 FT /rpt_family="AluSq" FT repeat_region 1731292..1731591 FT /rpt_family="AluSg" FT repeat_region 1731640..1731840 FT /rpt_family="L1MC1" FT repeat_region 1731883..1732182 FT /rpt_family="AluSx" FT repeat_region complement(1732255..1732556) FT /rpt_family="AluSx" FT repeat_region 1733005..1733301 FT /rpt_family="AluSp" FT repeat_region 1733312..1733406 FT /rpt_family="AluJb" FT repeat_region complement(1733409..1733460) FT /rpt_family="AluSq" FT repeat_region 1733455..1733518 FT /rpt_family="AluJb" FT repeat_region 1733786..1734048 FT /rpt_family="AluJo" FT misc_feature 1734597..1734663 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 54.000" FT repeat_region 1735456..1735745 FT /rpt_family="AluJb" FT repeat_region 1735975..1736273 FT /rpt_family="AluSp" FT repeat_region complement(1737289..1737338) FT /rpt_family="(TGAA)n" FT repeat_region complement(1737354..1737532) FT /rpt_family="LINE2" FT repeat_region 1737535..1737828 FT /rpt_family="AluSg" FT repeat_region complement(1737880..1737932) FT /rpt_family="LINE2" FT repeat_region 1737937..1738228 FT /rpt_family="AluJb" FT repeat_region 1738241..1738541 FT /rpt_family="AluY" FT repeat_region complement(1738649..1738723) FT /rpt_family="MER5A" FT repeat_region complement(1738753..1738849) FT /rpt_family="MER5A" FT repeat_region 1738933..1739132 FT /rpt_family="MIR" FT repeat_region 1739230..1739358 FT /rpt_family="AluJo/FLAM" FT repeat_region 1739362..1739662 FT /rpt_family="AluSx" FT repeat_region 1739666..1739963 FT /rpt_family="AluY" FT repeat_region 1740002..1740113 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(1740136..1740375) FT /rpt_family="MLT1E" FT repeat_region complement(1740382..1740471) FT /rpt_family="FLAM_A" FT repeat_region complement(1740571..1740710) FT /rpt_family="FRAM" FT repeat_region complement(1740740..1740866) FT /rpt_family="MLT1E" FT repeat_region complement(1740868..1741170) FT /rpt_family="AluY" FT repeat_region complement(1741318..1741617) FT /rpt_family="AluSg" FT repeat_region complement(1741901..1741996) FT /rpt_family="MIR" FT repeat_region complement(1742021..1742262) FT /rpt_family="AluSc" FT repeat_region 1742445..1742740 FT /rpt_family="AluSg" FT misc_feature 1743362..1743386 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 53.000" FT repeat_region complement(1743446..1743548) FT /rpt_family="MIR" FT repeat_region complement(1743706..1744007) FT /rpt_family="AluSx" FT repeat_region 1744310..1744346 FT /rpt_family="MIR" FT repeat_region complement(1744571..1744735) FT /rpt_family="(GGA)n" FT repeat_region complement(1744896..1744939) FT /rpt_family="MIR" FT repeat_region 1745852..1745965 FT /rpt_family="(GGAA)n" FT repeat_region 1745981..1746099 FT /rpt_family="(GGGA)n" FT repeat_region 1746097..1746223 FT /rpt_family="(GGA)n" FT repeat_region 1746235..1746416 FT /rpt_family="(GGA)n" FT repeat_region 1747074..1747169 FT /rpt_family="MIR" FT repeat_region 1747417..1747459 FT /rpt_family="(CA)n" FT misc_feature 1748161..1748340 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 95.000" FT repeat_region 1749006..1749051 FT /rpt_family="GC_rich" FT misc_feature 1749071..1749141 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 68.000" FT repeat_region complement(1749570..1749610) FT /rpt_family="GC_rich" FT repeat_region complement(1749679..1749723) FT /rpt_family="GC_rich" FT repeat_region 1753279..1753332 FT /rpt_family="GC_rich" FT repeat_region complement(1753393..1753592) FT /rpt_family="GC_rich" FT misc_feature 1753662..1755110 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 91.000" FT repeat_region 1753750..1753893 FT /rpt_family="(CGG)n" FT repeat_region complement(1754001..1754132) FT /rpt_family="(CGG)n" FT repeat_region complement(1754249..1754361) FT /rpt_family="(CGG)n" FT repeat_region 1754457..1754593 FT /rpt_family="(CGG)n" FT repeat_region complement(1755183..1755219) FT /rpt_family="(CA)n" FT repeat_region 1755488..1755569 FT /rpt_family="GC_rich" FT misc_feature 1755970..1756084 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 67.000" FT misc_feature 1756348..1756505 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 51.000" FT repeat_region complement(1756532..1756848) FT /rpt_family="AluSq" FT misc_feature 1757047..1757228 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 58.000" FT repeat_region complement(1757540..1757593) FT /rpt_family="GC_rich" FT repeat_region 1758100..1758246 FT /rpt_family="(GA)n" FT repeat_region 1758218..1758341 FT /rpt_family="(GA)n" FT repeat_region 1758520..1758552 FT /rpt_family="MIR" FT repeat_region 1758758..1758804 FT /rpt_family="GC_rich" FT repeat_region 1759454..1759540 FT /rpt_family="(GGA)n" FT repeat_region 1759717..1759766 FT /rpt_family="MIR" FT misc_feature 1759834..1759913 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 73.000" FT misc_feature 1760519..1760604 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 90.000" FT repeat_region complement(1761049..1761351) FT /rpt_family="AluSq" FT misc_feature 1761674..1761803 FT /note="BLASTN similarity to cpg218a9.rt1b(1..130); match: FT 1, score: 3.1e-47; database searched: Sanger CpG; bases 83 FT to 212 (SL to QR)" FT repeat_region complement(1762219..1762283) FT /rpt_family="(CGGG)n" FT repeat_region 1762937..1763080 FT /rpt_family="AluJ" FT repeat_region 1763081..1763385 FT /rpt_family="AluSx" FT repeat_region 1763386..1763564 FT /rpt_family="AluJ" FT repeat_region complement(1763710..1763747) FT /rpt_family="POLY_A" FT misc_feature 1763749..1763942 FT /note="BLASTN similarity to cpg279d6.rt1a(1..194); match: FT .99, score: 2.6e-73; database searched: Sanger CpG; bases FT 65 to 258 (SL to QR)" FT misc_feature 1763753..1763866 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 83.000" FT misc_feature complement(1763757..1763993) FT /note="BLASTN similarity to cpg216e11.rt1a(1..239); match: FT 1, score: 6.3e-87; database searched: Sanger CpG; bases 85 FT to 323 (SL to QR)" FT repeat_region 1764699..1764770 FT /rpt_family="MIR" FT repeat_region complement(1765703..1765781) FT /rpt_family="MIR3" FT repeat_region 1766424..1766576 FT /rpt_family="GA-rich" FT misc_feature 1766918..1767371 FT /note="Overlap with AC004755" FT repeat_region complement(1766958..1767076) FT /rpt_family="L2" FT repeat_region complement(1767314..1767358) FT /rpt_family="MIR" FT repeat_region complement(1768166..1768419) FT /rpt_family="LINE2" FT misc_feature 1768628..1768686 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 75.000" FT repeat_region 1768720..1768844 FT /rpt_family="(GGA)n" FT repeat_region 1768849..1768967 FT /rpt_family="(GGA)n" FT misc_feature 1768856..1769296 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 94.000" FT repeat_region 1768956..1769075 FT /rpt_family="(TGG)n" FT repeat_region 1769080..1769133 FT /rpt_family="(GGA)n" FT repeat_region 1769134..1769252 FT /rpt_family="(TGG)n" FT repeat_region 1769314..1769405 FT /rpt_family="(TGG)n" FT repeat_region 1770110..1770241 FT /rpt_family="AluJo" FT repeat_region 1770130..1770444 FT /rpt_family="Alu" FT repeat_region 1770285..1770450 FT /rpt_family="AluJo" FT repeat_region 1770547..1770613 FT /rpt_family="(TGAA)n" FT repeat_region complement(1771689..1771977) FT /rpt_family="AluJo" FT repeat_region complement(1771689..1772477) FT /rpt_family="Alu" FT repeat_region complement(1771978..1772011) FT /rpt_family="(TAAA)n" FT repeat_region complement(1772012..1772309) FT /rpt_family="AluSx" FT repeat_region complement(1772332..1772494) FT /rpt_family="FRAM" FT repeat_region complement(1772690..1773001) FT /rpt_family="AluSp" FT repeat_region complement(1772692..1773001) FT /rpt_family="Alu" FT repeat_region complement(1773234..1773295) FT /rpt_family="(GA)n" FT repeat_region 1774299..1774432 FT /rpt_family="FLAM_C" FT repeat_region 1774319..1774428 FT /rpt_family="Alu" FT repeat_region complement(1775118..1775149) FT /rpt_family="(CGGG)n" FT CDS <1775152..1775444 FT /codon_start=3 FT /product="fos37502_1" FT /note="Hypthetical human transcription factor; Most similar FT to (X96553) hepatocyte nuclear factor 6 alpha [Rattus FT norvegicus] (67% identity), (U77975) hepatocyte nuclear FT factor 6 [Homo sapiens] (66% identity), (U95945) FT hepatocyte nuclear factor 6 [Mus musculus] (66% identity), FT and (AF045642) Similar to homeobox protein [Caenorhabditis FT elegans] (62% identity)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC17602.1" FT /translation="CKRKEQEQQKERALQPKKQRLVFTDLQRRTLIAIFKENKRPSKEM FT QVTISQQLGLELNTVSNFFMNARRRCMNRWAEEPSTAPGGPAGATATFSKA" FT misc_feature 1775152..1775444 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 82.000" FT repeat_region 1775395..1775426 FT /rpt_family="GC_rich" FT misc_feature 1775849..1776113 FT /note="BLASTN similarity to Z65958 (1..269); match: 0.98, FT score: 1.0e-90; database searched: nt; H.sapiens CpG DNA, FT clone 69d1, reverse read cpg69d1.rt1a ." FT misc_feature complement(1775901..1776101) FT /note="BLASTN similarity to Z65957 (13..213); match: 0.97, FT score: 8.4e-71; database searched: nt; H.sapiens CpG DNA, FT clone 69d1, forward read cpg69d1.ft1a ." FT misc_feature 1776268..1776415 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 66.000" FT repeat_region 1777013..1777077 FT /rpt_family="(GA)n" FT repeat_region 1777277..1777362 FT /rpt_family="(CA)n" FT repeat_region 1777366..1777491 FT /rpt_family="(CA)n" FT repeat_region 1777713..1778012 FT /rpt_family="Alu" FT repeat_region 1777713..1778014 FT /rpt_family="AluSq" FT repeat_region complement(1778106..1778381) FT /rpt_family="AluJo" FT repeat_region complement(1778130..1778381) FT /rpt_family="Alu" FT repeat_region 1778720..1778820 FT /rpt_family="FLAM_C" FT repeat_region 1778720..1778816 FT /rpt_family="Alu" FT repeat_region 1778866..1778912 FT /rpt_family="(CA)n" FT misc_feature 1779090..1779408 FT /note="DDS similarity to AA587610 nm95a11.s1 NCI_CGAP_Co9 FT Homo sapiens cDNA clone IMAGE:1075964; (462..144); 100% FT identity." FT repeat_region 1779384..1779464 FT /rpt_family="(GA)n" FT misc_feature 1779459..1779601 FT /note="DDS similarity to AA587610 nm95a11.s1 NCI_CGAP_Co9 FT Homo sapiens cDNA clone IMAGE:1075964; (143..1); 99% FT identity." FT repeat_region 1779567..1779608 FT /rpt_family="POLY_A" FT misc_feature complement(1781065..1781134) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 62.000" FT repeat_region 1781315..1781615 FT /rpt_family="AluY" FT repeat_region 1781320..1781614 FT /rpt_family="Alu" FT misc_feature 1782074..1782439 FT /note="BLASTN similarity to: AA922094 (4..369); match: FT 0.99, score: 6.6e-144; database searched: month.na; FT om41e09.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone FT IMAGE:1543624 3'~(15178..15466) AA927168 (1..289); match: FT 0.98, score: 3.3e-110; database searched: month.na; FT om08a07.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone FT IMAGE:1540404 3'" FT misc_feature complement(1782287..1782641) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 69.000" FT misc_feature complement(1782294..1782635) FT /note="DDS similarity to AA383337 EST96988 Testis I Homo FT sapiens cDNA 5' end; Score: 680 Identity: 341/342 (99%)." FT misc_feature 1782982..1783123 FT /note="BLASTN similarity to: AA927168 (83..223); match: FT 0.91, score: 7.1e-39; database searched: month.na; FT om08a07.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone FT IMAGE:1540404 3'~AA922094 (111..251); match: 0.92, score: FT 5.3e-36; database searched: month.na; om41e09.s1 FT Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1543624 FT 3'" FT misc_feature complement(1783027..1783269) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 75.000" FT repeat_region complement(1783843..1783977) FT /rpt_family="Alu" FT repeat_region complement(1783843..1783997) FT /rpt_family="FRAM" FT repeat_region 1784231..1784532 FT /rpt_family="AluJb" FT repeat_region 1784243..1784524 FT /rpt_family="Alu" FT misc_feature complement(1784813..1784945) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT CDS complement(join(1784928..1784945,1785186..1785296, FT 1785468..1785707,1788896..1789119,1789360..1789726, FT 1789889..1789988,1790756..1790831,1791749..1791860, FT 1791970..1792134,1795874..1795986,1796076..1796264, FT 1796738..1796878,1799946..1800154,1800258..1800448, FT 1801955..1802061,1802486..1802644,1805373..1805455, FT 1805887..1805957,1806096..>1806146)) FT /codon_start=1 FT /product="fos37502_2" FT /note="Hypothetical Ca-transporting ATPase-like human FT protein ONECUT3; Most similar to (AF038007) FIC1 [Homo FT sapiens] (54% identity), (U75321) chromaffin granule ATPase FT II homolog [Mus musculus] (52% identity),and FT P39524|ATC3_YEAST PROBABLE CALCIUM-TRANSPORTING ATPASE 3 FT (ENDOPLASMIC RETICULUM CA2+-ATPASE) pir||S51995 probable FT ATPase (EC 3.6.1.) (47% identity)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC17601.1" FT /translation="DLCVGDVVCLRKDNIVPADMLLLASTEPSSLCYVETVDIDGETNL FT KFRQALMVTHKELATIKKMASFQGTVTCEAPNSRMHHFVGCLEWNDKKYSLDIGNLLLR FT GCRIRNTDTCYGLVIYADGYMFVGFDTKIMKNCGKIHLKRTKLDLLMNKLVVVIFISVV FT LVCLVLAFGFGFSVKEFKDHHYYLSGVHGSSVAAESFFVFWSFLILLSVTIPMSMFILS FT EFIYLGNSVFIDWDVQMYYKPQDVPAKARSTSLNDHLGQVEYIFSDKTGTLTQNILTFN FT KCCISGRVYGEPLPLEQVRRREAALPQCGPAAPRADQRGRGRAGVLAPAGHLPHGDDQL FT LYQAASPDEGALVTAARNFGYVFLSRTQDTVTIMELGEERVYQVLAIMDFNSTRKRMSV FT LVRKPEGAICLYTKGADTVIFERLHRRGAMEFATEEALAAFAQETLRTLCLAYREVAED FT IYEDWQQRHQEASLLLQNRAQALQQVYNEMEQDLRLLGATAIEDRLQDGVPETIKCLKK FT SNIKIWVLTGDKQETAVNIGFACELLSENMLILEEKEISRILETYWENSNNLLTRESLS FT QVKLALVINGDFLDKLLVSLRKEPRALAQNVNMDEAWQELGQSRRDFLYARRLSLLCRR FT FGLPLAAPPAQDSRARRSSEVLQERAFVDLASKCQAVICCRVTPKQKALIVALVKKYHQ FT VVTLAIGDGANDINMIKTADVGVGLAGQEGMQAVQNSDFVLGQFCFLQRLLLVHGRWSY FT VRICKFLRYFFYKSMASMMVQVWFACYNGFTGQDVSAEQSLEKPELYVVGQKDELFNYW FT VFVQAIAHGVTTSLVNFFMTLWISRDTAGPASFSDHQSFAVVVALSCLLSITMEVILII FT KYWTALCVATILLSLGFYAIMTTTTQSFWLFRMPTSA" FT misc_feature complement(1785186..1785296) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 98.000" FT misc_feature complement(1785468..1785707) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 97.000" FT repeat_region 1785848..1786150 FT /rpt_family="AluJo" FT repeat_region 1785857..1786108 FT /rpt_family="Alu" FT repeat_region 1786283..1786583 FT /rpt_family="AluSx" FT repeat_region 1786291..1786581 FT /rpt_family="Alu" FT repeat_region 1787446..1787748 FT /rpt_family="AluSq" FT repeat_region 1787455..1788044 FT /rpt_family="Alu" FT repeat_region 1787762..1788060 FT /rpt_family="AluSg" FT repeat_region 1788369..1788667 FT /rpt_family="AluSx" FT repeat_region 1788369..1788657 FT /rpt_family="Alu" FT misc_feature complement(1788896..1789119) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~(22137..21975) FT DDS similarity to AA437803 ve33g06.r1 Ko mouse embryo 11 FT 5dpc Mus musculus cDNA clone 819994 5' similar to FT SW:ATCX_SCHPO Q09891 PROBABLE CALCIUM-TRANSPORTING ATPASE ; FT (1..163); 75% identity." FT repeat_region complement(1789072..1789271) FT /rpt_family="POLY_G" FT repeat_region complement(1789240..1789356) FT /rpt_family="(TGG)n" FT misc_feature complement(1789360..1789726) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 91.000" FT repeat_region complement(1789817..1789867) FT /rpt_family="GC_rich" FT misc_feature complement(1789889..1789988) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region complement(1790136..1790330) FT /rpt_family="(GGGA)n" FT repeat_region complement(1790336..1790453) FT /rpt_family="(GGGA)n" FT repeat_region complement(1790512..1790633) FT /rpt_family="(GGAA)n" FT misc_feature complement(1790756..1790914) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 85.000" FT repeat_region complement(1791217..1791678) FT /rpt_family="Alu" FT repeat_region complement(1791217..1791371) FT /rpt_family="AluJb" FT repeat_region complement(1791389..1791678) FT /rpt_family="AluSx" FT misc_feature complement(1791749..1791860) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(1791966..1792134) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 1792297..1792595 FT /rpt_family="AluSx" FT repeat_region 1792297..1792928 FT /rpt_family="Alu" FT repeat_region 1792629..1792933 FT /rpt_family="AluSx" FT repeat_region complement(1793079..1793399) FT /rpt_family="AluJo" FT repeat_region complement(1793082..1793389) FT /rpt_family="Alu" FT repeat_region complement(1793740..1794029) FT /rpt_family="AluSx" FT repeat_region complement(1793754..1794182) FT /rpt_family="Alu" FT repeat_region complement(1794036..1794207) FT /rpt_family="AluJo" FT repeat_region complement(1794680..1794730) FT /rpt_family="LINE2" FT repeat_region 1794974..1795264 FT /rpt_family="AluSx" FT repeat_region 1794974..1795557 FT /rpt_family="Alu" FT repeat_region 1795269..1795568 FT /rpt_family="AluSx" FT misc_feature complement(1795698..1795781) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 65.000" FT repeat_region 1795784..1795848 FT /rpt_family="(CA)n" FT misc_feature complement(1795874..1795986) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 97.000" FT misc_feature complement(1796076..1796264) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature complement(1796710..1796878) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(1796943..1797004) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 60.000" FT repeat_region complement(1797452..1797496) FT /rpt_family="(TAAA)n" FT repeat_region complement(1797497..1797797) FT /rpt_family="AluSx" FT repeat_region complement(1797512..1797789) FT /rpt_family="Alu" FT repeat_region complement(1797802..1797958) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(1797843..1797925) FT /rpt_family="Alu" FT repeat_region complement(1797970..1798227) FT /rpt_family="AluSx" FT repeat_region complement(1797991..1798221) FT /rpt_family="Alu" FT repeat_region complement(1798367..1798442) FT /rpt_family="MER58B" FT repeat_region 1798456..1798756 FT /rpt_family="AluY" FT repeat_region 1798456..1798753 FT /rpt_family="Alu" FT repeat_region 1798860..1799155 FT /rpt_family="AluJo" FT repeat_region 1798860..1799778 FT /rpt_family="Alu" FT repeat_region 1799176..1799478 FT /rpt_family="AluSq" FT repeat_region 1799483..1799778 FT /rpt_family="AluSx" FT misc_feature complement(1799946..1800154) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature complement(1800258..1800448) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region 1800537..1800807 FT /rpt_family="AluJo" FT repeat_region 1800548..1800795 FT /rpt_family="Alu" FT repeat_region complement(1800824..1801126) FT /rpt_family="AluY" FT repeat_region complement(1800831..1801437) FT /rpt_family="Alu" FT repeat_region complement(1801149..1801449) FT /rpt_family="AluSx" FT repeat_region 1801449..1801744 FT /rpt_family="Alu" FT repeat_region 1801468..1801764 FT /rpt_family="AluSx" FT repeat_region complement(1801768..1801822) FT /rpt_family="AT_rich" FT misc_feature complement(1801955..1802061) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 95.000" FT repeat_region complement(1802104..1802217) FT /rpt_family="(TGAG)n" FT repeat_region complement(1802245..1802421) FT /rpt_family="(TGGA)n" FT misc_feature complement(1802486..1802644) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 92.000" FT repeat_region 1802978..1803075 FT /rpt_family="LINE2" FT misc_feature complement(1803311..1803381) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 81.000" FT repeat_region 1803434..1803471 FT /rpt_family="MIR" FT repeat_region 1803615..1803913 FT /rpt_family="Alu" FT repeat_region 1803615..1803915 FT /rpt_family="AluSq" FT repeat_region 1804211..1804818 FT /rpt_family="Alu" FT repeat_region 1804211..1804326 FT /rpt_family="AluSq" FT repeat_region 1804327..1804625 FT /rpt_family="AluY" FT repeat_region 1804626..1804824 FT /rpt_family="AluSq" FT repeat_region complement(1804977..1805273) FT /rpt_family="AluJo" FT repeat_region complement(1805014..1805262) FT /rpt_family="Alu" FT misc_feature complement(1805373..1805455) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(1805586..1805629) FT /rpt_family="MIR" FT misc_feature complement(1805887..1805957) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 93.000" FT misc_feature 1807553..1808076 FT /note="Overlap with AC012615" FT misc_feature 1949925..1992493 FT /note="Map and sequence oriented from p-telomere to FT centromere. Bases 1 to 40,958 are derived from cosmid FT R27216 (LLNLR-232D4); bases 40,369 to 42,569 are derived FT from overlapping PCR product. This accession overlaps BAC FT BC41487 (CTB-31O20, AC012615) on the left from bases 1 to FT 6,880 of this accession, and overlaps cosmid R34094 FT (LLNLR-304A6, AC004678) on the right from bases 41,928 to FT 42,569 of this accession. Additional chr 19 map and FT sequence information are available at: FT http://www-bio.llnl.gov/bbrp/genome/genome.html" FT repeat_region 1960609..1960901 FT /rpt_family="AluSx" FT repeat_region 1960630..1960896 FT /rpt_family="Alu" FT repeat_region 1962034..1962665 FT /rpt_family="Alu" FT repeat_region 1962047..1962346 FT /rpt_family="AluSx" FT repeat_region 1962398..1962676 FT /rpt_family="AluJo" FT repeat_region 1962685..1963170 FT /rpt_family="L1MB8" FT repeat_region complement(1963245..1963510) FT /rpt_family="AluY" FT repeat_region complement(1963254..1963506) FT /rpt_family="Alu" FT repeat_region complement(1963513..1963806) FT /rpt_family="AluSx" FT repeat_region complement(1963533..1964114) FT /rpt_family="Alu" FT repeat_region complement(1963815..1964122) FT /rpt_family="AluSx" FT repeat_region 1964123..1964311 FT /rpt_family="AluJo" FT repeat_region 1964138..1964309 FT /rpt_family="Alu" FT repeat_region 1964314..1964717 FT /rpt_family="TIGGER1" FT repeat_region 1964319..1964768 FT /rpt_family="Tigger1" FT repeat_region complement(1964725..1965024) FT /rpt_family="AluY" FT repeat_region complement(1964725..1965019) FT /rpt_family="Alu" FT repeat_region 1965025..1965100 FT /rpt_family="TIGGER1" FT repeat_region 1965025..1965081 FT /rpt_family="Tigger1" FT repeat_region 1965113..1965398 FT /rpt_family="AluY" FT repeat_region 1965113..1965396 FT /rpt_family="Alu" FT repeat_region 1965402..1965458 FT /rpt_family="TIGGER1" FT repeat_region complement(1965499..1965797) FT /rpt_family="AluJb" FT repeat_region complement(1965540..1965786) FT /rpt_family="Alu" FT repeat_region complement(1965809..1966097) FT /rpt_family="AluJo" FT repeat_region complement(1965809..1966089) FT /rpt_family="Alu" FT repeat_region 1966040..1966869 FT /rpt_family="Tigger1" FT repeat_region 1966103..1966869 FT /rpt_family="TIGGER1" FT repeat_region complement(1966870..1967062) FT /rpt_family="AluJo" FT repeat_region complement(1966910..1967029) FT /rpt_family="Alu" FT repeat_region 1967055..1967130 FT /rpt_family="Tigger1" FT repeat_region 1967063..1967146 FT /rpt_family="TIGGER1" FT mRNA join(1969542..1969958,1978304..1978344,1978441..1978510, FT 1978601..1978749,1978858..1979092,1979162..1979247, FT 1979318..1979402,1979494..1979642,1979751..1979834, FT 1979910..1980016,1980148..1980468) FT /product="Homo sapiens casein kinase I gamma 2 mRNA" FT gene 1969772..1980928 FT /gene="CSNK1G2" FT /note="casein kinase 1, gamma 2 locus" FT CDS join(1969772..1969958,1978304..1978344,1978441..1978510, FT 1978601..1978749,1978858..1979092,1979162..1979247, FT 1979318..1979402,1979494..1979642,1979751..1979834, FT 1979910..1980016,1980148..1980202) FT /codon_start=1 FT /gene="CSNK1G2" FT /product="KC12_HUMAN" FT /note="CASEIN KINASE I; CKI-GAMMA 2" FT /protein_id="AAC26983.1" FT /translation="MDFDKKGGKGETEEGRRMSKAGGGRSSHGIRSSGTSSGVLMVGPN FT FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATEGVPQ FT VYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIY FT RDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSIN FT THLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE FT NFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRSGFVFDYEYDWAGKPLPTPIGT FT VHTDLPSQPQLRDKTQPHSKNQALNSTNGELNADDPTAGHSNAPITAPAEVEVADETKC FT CCFFKRRKRKSLQRHK" FT repeat_region 1971067..1971121 FT /rpt_family="MIR" FT repeat_region 1971482..1971596 FT /rpt_family="(CA)n" FT repeat_region complement(1971767..1972067) FT /rpt_family="AluY" FT repeat_region complement(1971769..1972067) FT /rpt_family="Alu" FT repeat_region complement(1972416..1972607) FT /rpt_family="L1M4" FT repeat_region complement(1972620..1972922) FT /rpt_family="AluSq" FT repeat_region complement(1972629..1973491) FT /rpt_family="Alu" FT repeat_region complement(1972926..1973225) FT /rpt_family="AluY" FT repeat_region complement(1973226..1973508) FT /rpt_family="AluSx" FT repeat_region complement(1973595..1973646) FT /rpt_family="(CAG)n" FT repeat_region complement(1973827..1973879) FT /rpt_family="MSTD" FT repeat_region complement(1973885..1974190) FT /rpt_family="AluSg" FT repeat_region complement(1973899..1974242) FT /rpt_family="Alu" FT repeat_region complement(1974196..1974509) FT /rpt_family="MSTD" FT repeat_region 1975753..1976046 FT /rpt_family="AluSx" FT repeat_region 1975764..1976046 FT /rpt_family="Alu" FT repeat_region complement(1976737..1977037) FT /rpt_family="AluSp" FT repeat_region complement(1976741..1977037) FT /rpt_family="Alu" FT repeat_region 1977483..1977769 FT /rpt_family="AluJb" FT repeat_region 1977489..1977767 FT /rpt_family="Alu" FT repeat_region complement(1978514..1978579) FT /rpt_family="GC_rich" FT repeat_region complement(1978752..1978777) FT /rpt_family="GC_rich" FT repeat_region complement(1979100..1979136) FT /rpt_family="GC_rich" FT repeat_region 1979416..1979482 FT /rpt_family="GC_rich" FT repeat_region 1980550..1980587 FT /rpt_family="GC_rich" FT repeat_region complement(1982023..1982095) FT /rpt_family="L1M4" FT repeat_region 1982096..1982349 FT /rpt_family="AluY" FT repeat_region 1982117..1982349 FT /rpt_family="Alu" FT repeat_region complement(1982414..1982700) FT /rpt_family="AluJo" FT repeat_region complement(1982414..1982690) FT /rpt_family="Alu" FT repeat_region complement(1982821..1983103) FT /rpt_family="AluSx" FT repeat_region complement(1982834..1983095) FT /rpt_family="Alu" FT repeat_region 1983124..1983417 FT /rpt_family="AluY" FT repeat_region 1983130..1983416 FT /rpt_family="Alu" FT repeat_region complement(1983430..1983609) FT /rpt_family="L1M4" FT repeat_region complement(1983611..1983912) FT /rpt_family="AluY" FT repeat_region complement(1983623..1984228) FT /rpt_family="Alu" FT repeat_region complement(1983918..1984217) FT /rpt_family="AluSx" FT repeat_region complement(1984469..1984593) FT /rpt_family="Alu,FLAM_C" FT repeat_region complement(1984715..1985002) FT /rpt_family="AluSx" FT repeat_region complement(1984715..1984994) FT /rpt_family="Alu" FT repeat_region complement(1985222..1985299) FT /rpt_family="AluJb" FT repeat_region complement(1985236..1985296) FT /rpt_family="Alu" FT misc_feature complement(1985442..1986648) FT /note="DDS similarity to overlaping ESTs:; (35518..36021) FT AA121336 zn77c07.s1 Stratagene NT2 neuronal precursor FT 937230 Homo sapiens cDNA clone 564204 3'; Score: 816 FT Identity: 475/514 (92%).~(35528..36119) W68046 zd42a12.s1 FT Soares fetal heart NbHH19W Homo sapiens cDNA clone 343294 FT 3' similar to contains element MSR1 repetitive element; FT Score: 945 Identity: 555/575 (96%).~(36724..36304) AA009502 FT zi04e07.r1 Soares fetal liver spleen 1NFLS S1 Homo sapiens FT cDNA clone 429828 5'; (47.. 469); 97% FT identity.~(36724..36348) R51748 yg73d11.r1 Homo sapiens FT cDNA clone 39237 5'; (129..511); 95% FT identity.~(36724..36365) W68188 zd42a12.r1 Soares fetal FT heart NbHH19W Homo sapiens cDNA clone 343294 5'; FT (222..575); 87% identity." FT mRNA complement(join(1985447..1986648,1986829..1986975, FT 1987165..1987252,1987499..1987691,1990003..1990200, FT 1990716..1991298)) FT /product="mRNA for hypothetical protein FLJ20386" FT CDS complement(join(1986487..1986648,1986829..1986975, FT 1987165..1987252,1987499..1987691,1990003..1990200, FT 1990716..>1990821)) FT /codon_start=1 FT /product="R27216_1" FT /note="Hypothetical partial human protein most similar to FT F38H4.7 [Caenorhabditis elegans] (52% identical); FT Hypothetical ORF constructed from Xgrail 2 exons, ESTs and FT BLAST matches to F38H4.7; BLAST match to hypothetical human FT protein FLJ20386" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC26984.1" FT /translation="ARLFDEPQLASLCLENIDKNTADAITAEGFTDIDLDTLVAVLERD FT TLGIREVRLFNAVVRWSEAECQRQQLQVTPENRRKVLGKALGLIRFPLMTIEEFAAGPA FT QSGILVDREVVSLFLHFTVNPKPRVEFIDRPRCCLRGKECSINRFQQVESRWGYSGTSD FT RIRFSVNKRIFVVGFGLYGSIHGPTDYQVNIQIIHTDSNTVLGQNDTGFSCDGSASTFR FT VMFKEPVEVLPNVNYTACATLKGPDSHYGTKGLRKVTHESPTTGAKTCFTFCYAAGNNN FT GTSVEDGQIPEVIFYT" FT CDS complement(join(1986487..1986648,1986829..1986975, FT 1987165..1987252,1987499..1987691,1990003..1990027)) FT /codon_start=1 FT /product="hypothetical protein FLJ20386" FT /protein_id="AAG45443.1" FT /translation="MTIEEFAAGPAQSGILVDREVVSLFLHFTVNPKPRVEFIDRPRCC FT LRGKECSINRFQQVESRWGYSGTSDRIRFSVNKRIFVVGFGLYGSIHGPTDYQVNIQII FT HTDSNTVLGQNDTGFSCDGSASTFRVMFKEPVEVLPNVNYTACATLKGPDSHYGTKGLR FT KVTHESPTTGAKTCFTFCYAAGNNNGTSVEDGQIPEVIFYT" FT misc_feature complement(1986829..1986975) FT /note="DDS similarity to overlapping ESTs:; (37051..36905) FT W68188 zd42a12.r1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 343294 5'; (75..221); 100% identity.; FT (37032..36905) R51748 yg73d11.r1 Homo sapiens cDNA clone FT 39237 5'; (1..128); 100% identity.~(36950..36905) AA009502 FT zi04e07.r1 Soares fetal liver spleen 1NFLS S1 Homo sapiens FT cDNA clone 429828 5'; (1..46); 98% identity." FT misc_feature complement(1987165..1987252) FT /note="DDS similarity to overlapping ESTs:; (37314..37241) FT W68188 zd42a12.r1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 343294 5'; (1..74); 100% FT identity.~(37328..37283) T79892 yd09d04.r1 Homo sapiens FT cDNA clone 25229 5'; (355..407); 77% identity." FT misc_feature complement(1987499..1987691) FT /note="DDS similarity to overlapping ESTs:; T79892 FT yd09d04.r1 Homo sapiens cDNA clone 25229 5'; (160..354); FT 94% identity." FT repeat_region complement(1988568..1989119) FT /rpt_family="Alu" FT repeat_region complement(1988568..1988621) FT /rpt_family="AluSp/q" FT repeat_region complement(1988622..1988903) FT /rpt_family="AluSq" FT repeat_region complement(1988918..1989096) FT /rpt_family="AluSp" FT repeat_region 1989112..1989374 FT /rpt_family="AluJo" FT repeat_region 1989120..1989374 FT /rpt_family="Alu" FT misc_feature complement(1990003..1990200) FT /note="DDS similarity to overlapping ESTs:; (40276..40079) FT AA049567 mj36e04.r1 Soares mouse embryo NbME13.5 14.5 Mus FT musculus cDNA clone 478206 5'; (269..73); 85% FT identity.~(40276..40079) R48736 yj68c09.r1 Homo sapiens FT cDNA clone 153904 5'; (230..36); 96% FT identity.~(40249..40079) T79892 yd09d04.r1 Homo sapiens FT cDNA clone 25229 5'; (1..159); 89% identity." FT repeat_region complement(1990296..1990479) FT /rpt_family="MER58A" FT misc_feature complement(1990716..1990821) FT /note="DDS similarity to overlapping ESTs:; AA049567 FT mj36e04.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus FT cDNA clone 478206 5'; (375..270); 86% identity.~R48736 FT yj68c09.r1 Homo sapiens cDNA clone 153904 5'; (337..231); FT 97% identity." FT repeat_region 1991941..1992093 FT /rpt_family="Alu" FT repeat_region complement(1992100..1992465) FT /rpt_family="Alu" FT repeat_region complement(1992406..1992538) FT /rpt_family="FLAM_C" FT repeat_region complement(1992578..1992870) FT /rpt_family="AluSx" FT repeat_region complement(1992909..1993016) FT /rpt_family="GC_rich" FT misc_feature complement(1993006..1993175) FT /note="DPS similarity to PID|e255903 (Z77660) F38H4.7 FT [Caenorhabditis elegans]; (residues 253..309); 67% FT identity.~~predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(1324..1168) T50998 FT yb71g05.s1 Homo sapiens cDNA clone 76664 3' contains MER22 FT repetitive element; (280..124); 96% identity.~~(1324..1167) FT W62177 md87d04.r1 Soares mouse embryo NbME13.5 14.5 Mus FT musculus cDNA clone 375367 5' similar to WP:T16H12.5 FT CE00510 KRUPPEL-LIKE ZINC FINGER PROTEIN ; (154..311); 87% FT identity.~~(1324..1168) T51086 yb71g05.r1 Homo sapiens cDNA FT clone 76664 5'; (61..221); 98% identity.~~Other EST FT matches: T51086" FT CDS complement(join(<1993006..1993175,1997343..1997462, FT 2015296..>2015413)) FT /codon_start=3 FT /product="R34094_1" FT /note="Hypothetical human protein most similar to (Z77660) FT F38H4.7 [Caenorhabditis elegans]" FT /protein_id="AAC16070.1" FT /translation="ASKPTVQERFAFLFNNEVLCDVHFLVGKGLSSQRIPAHRFVLAVG FT SAVFDAMFNGGMATTSTEIELPDVEPAAFLALLKFLYSDEVQIGPETVMTTLYTAKKYA FT VPALEAHCVEFLKKNLRADNAFMLLTQVGGA" FT repeat_region 1993713..1994014 FT /rpt_family="AluSx" FT repeat_region 1994035..1994334 FT /rpt_family="AluSx" FT repeat_region 1994348..1994463 FT /rpt_family="FLAM_C" FT repeat_region 1994479..1994777 FT /rpt_family="AluSc" FT repeat_region complement(1994788..1994954) FT /rpt_family="L1" FT repeat_region complement(1994965..1995265) FT /rpt_family="AluSx" FT repeat_region complement(1995279..1995580) FT /rpt_family="AluY" FT repeat_region complement(1995636..1995953) FT /rpt_family="AluY" FT repeat_region complement(1995958..1996490) FT /rpt_family="L1" FT repeat_region 1996510..1996564 FT /rpt_family="AluSp/q" FT repeat_region 1996565..1996598 FT /rpt_family="(GAAAA)n" FT repeat_region 1996601..1996888 FT /rpt_family="AluSx" FT repeat_region 1996900..1997194 FT /rpt_family="AluY" FT misc_feature complement(1997343..1997462) FT /note="DPS similarity to PID|e255903 (Z77660) F38H4.7 FT [Caenorhabditis elegans]; (residues 209..252); 72% FT identity.~~predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 95.000~~DDS similarity FT to overlapping ESTs: ~(5555..5492) T50998 yb71g05.s1 Homo FT sapiens cDNA clone 76664 3' contains MER22 repetitive FT element; (344..281); 92% identity.~~(5611..5492) W62177 FT md87d04.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus FT cDNA clone 375367 5' similar to WP:T16H12.5 CE00510 FT KRUPPEL-LIKE ZINC FINGER PROTEIN ; (35..153); 84% FT identity.~~(5551..5492) T51086 yb71g05.r1 Homo sapiens cDNA FT clone 76664 5'; (1..60);100% identity." FT repeat_region complement(1997784..1997919) FT /rpt_family="(TGAA)n" FT repeat_region 1997949..1998055 FT /rpt_family="(CATG)n" FT repeat_region complement(1998042..1998163) FT /rpt_family="(TGAA)n" FT repeat_region 1999384..1999677 FT /rpt_family="AluJo" FT repeat_region 1999678..1999987 FT /rpt_family="AluSx" FT repeat_region 2000020..2000225 FT /rpt_family="MLT1C" FT repeat_region 2000699..2000994 FT /rpt_family="L1MB5" FT repeat_region 2001001..2001215 FT /rpt_family="AluSq" FT repeat_region 2001217..2001506 FT /rpt_family="AluY" FT repeat_region complement(2001541..2001726) FT /rpt_family="MER21B" FT repeat_region complement(2001743..2002037) FT /rpt_family="AluSx" FT repeat_region complement(2002080..2002359) FT /rpt_family="AluJo" FT repeat_region complement(2002360..2002591) FT /rpt_family="MER21B" FT repeat_region 2002592..2002895 FT /rpt_family="AluY" FT repeat_region 2003068..2003184 FT /rpt_family="AluJo" FT repeat_region 2003191..2003486 FT /rpt_family="AluSg" FT repeat_region 2003487..2003788 FT /rpt_family="AluSp" FT repeat_region 2003805..2004287 FT /rpt_family="MER4A2" FT repeat_region complement(2004288..2004595) FT /rpt_family="AluSp" FT repeat_region 2004597..2004652 FT /rpt_family="MER4A" FT repeat_region 2004653..2004692 FT /rpt_family="L1PA15" FT repeat_region 2004696..2004824 FT /rpt_family="AluJo/FLAM" FT repeat_region complement(2004825..2005118) FT /rpt_family="AluY" FT repeat_region complement(2005140..2005304) FT /rpt_family="L1MC/D" FT repeat_region complement(2005322..2005498) FT /rpt_family="AluJo" FT repeat_region 2005500..2005797 FT /rpt_family="AluSq" FT repeat_region 2005814..2006104 FT /rpt_family="AluJo" FT repeat_region complement(2006143..2006314) FT /rpt_family="MER3" FT repeat_region 2006386..2006525 FT /rpt_family="AluSg/x" FT repeat_region complement(2006630..2006690) FT /rpt_family="MER58A" FT repeat_region complement(2006691..2006856) FT /rpt_family="AluSq" FT repeat_region complement(2006857..2007154) FT /rpt_family="AluSg" FT repeat_region complement(2007157..2007289) FT /rpt_family="AluSq" FT repeat_region complement(2007290..2007450) FT /rpt_family="MER58B" FT repeat_region complement(2007464..2007552) FT /rpt_family="FLAM_A" FT repeat_region 2007553..2007845 FT /rpt_family="AluSx" FT repeat_region complement(2008006..2008298) FT /rpt_family="AluSq" FT repeat_region complement(2008301..2008588) FT /rpt_family="AluSx" FT repeat_region complement(2008589..2008869) FT /rpt_family="AluJb" FT repeat_region complement(2009017..2009195) FT /rpt_family="AluSg/x" FT repeat_region complement(2009196..2009492) FT /rpt_family="AluSg" FT repeat_region 2009566..2009862 FT /rpt_family="AluSx" FT repeat_region 2009871..2010164 FT /rpt_family="AluSx" FT repeat_region complement(2010287..2010342) FT /rpt_family="LINE2" FT repeat_region complement(2010643..2010936) FT /rpt_family="AluSx" FT repeat_region complement(2011614..2011681) FT /rpt_family="MER8" FT repeat_region 2011672..2011847 FT /rpt_family="TIGGER2" FT repeat_region complement(2011852..2012152) FT /rpt_family="AluSg" FT repeat_region complement(2012158..2012448) FT /rpt_family="AluSg" FT repeat_region 2012536..2012653 FT /rpt_family="MER28" FT misc_feature complement(2012876..2013101) FT /note="DDS similarity to T05767 EST03656 Homo sapiens cDNA FT clone HFBDG15; (1..226); 96% identity.~" FT misc_feature complement(2015296..2015435) FT /note="DPS similarity to PID|e255903 (Z77660) F38H4.7 FT [Caenorhabditis elegans]; (residues 162..208); 55% FT identity." FT misc_feature complement(2015296..2015413) FT /note="DDS similarity to W76929 me58e03.r1 Soares mouse FT embryo NbME13.5 14.5 Mus musculus cDNA clone 391708 5'; FT (1..116); 93% identity." FT repeat_region complement(2015424..2015498) FT /rpt_family="(CGG)n" FT repeat_region 2015514..2015616 FT /rpt_family="(CGG)n" FT repeat_region complement(2015619..2015700) FT /rpt_family="GC_rich" FT repeat_region 2015725..2015855 FT /rpt_family="(GGGA)n" FT repeat_region 2015843..2015969 FT /rpt_family="(GGA)n" FT repeat_region 2015947..2016075 FT /rpt_family="(GGA)n" FT repeat_region 2016696..2016834 FT /rpt_family="AluSq/x" FT repeat_region 2016835..2017140 FT /rpt_family="AluSq" FT repeat_region 2017145..2017325 FT /rpt_family="AluJb" FT repeat_region complement(2017420..2017597) FT /rpt_family="AluSg/x" FT repeat_region complement(2017601..2017775) FT /rpt_family="AluY" FT repeat_region 2017777..2017817 FT /rpt_family="(TA)n" FT repeat_region complement(2017824..2018118) FT /rpt_family="AluSx" FT repeat_region 2018176..2018292 FT /rpt_family="L1ME2" FT repeat_region complement(2018332..2018640) FT /rpt_family="AluY" FT repeat_region 2018666..2018929 FT /rpt_family="AluJb" FT repeat_region 2018931..2018972 FT /rpt_family="(CA)n" FT repeat_region complement(2018973..2019073) FT /rpt_family="FLAM_C" FT repeat_region complement(2019094..2019395) FT /rpt_family="AluY" FT repeat_region complement(2019599..2019652) FT /rpt_family="POLY_A" FT repeat_region complement(2019927..2019996) FT /rpt_family="(GAAA)n" FT repeat_region complement(2019997..2020176) FT /rpt_family="AluJb" FT repeat_region 2020186..2020488 FT /rpt_family="AluY" FT repeat_region complement(2020492..2020757) FT /rpt_family="AluSg" FT repeat_region complement(2020859..2020901) FT /rpt_family="MER34" FT repeat_region 2020904..2021034 FT /rpt_family="AluSx" FT repeat_region 2021039..2021339 FT /rpt_family="AluY" FT repeat_region 2021340..2021508 FT /rpt_family="AluSx" FT repeat_region complement(2022105..2022407) FT /rpt_family="AluSx" FT repeat_region complement(2022428..2022561) FT /rpt_family="(GAAA)n" FT repeat_region complement(2022592..2022898) FT /rpt_family="AluJb" FT repeat_region 2023044..2023129 FT /rpt_family="MLT1G" FT repeat_region 2023216..2023511 FT /rpt_family="AluY" FT repeat_region 2023512..2023676 FT /rpt_family="AluSq" FT repeat_region 2023791..2023885 FT /rpt_family="AluSx" FT repeat_region 2023895..2024193 FT /rpt_family="AluY" FT repeat_region 2024198..2024370 FT /rpt_family="AluSx" FT repeat_region 2024484..2024562 FT /rpt_family="MLT1C" FT repeat_region 2024764..2025055 FT /rpt_family="AluY" FT repeat_region 2025065..2025188 FT /rpt_family="AluJ" FT repeat_region complement(2025189..2025481) FT /rpt_family="AluY" FT repeat_region complement(2025482..2025569) FT /rpt_family="(GAAA)n" FT repeat_region complement(2025570..2025877) FT /rpt_family="AluJb" FT repeat_region 2025878..2026066 FT /rpt_family="AluJ" FT repeat_region complement(2026108..2026419) FT /rpt_family="AluSx" FT repeat_region 2026545..2026848 FT /rpt_family="AluSx" FT repeat_region 2027112..2027172 FT /rpt_family="(CA)n" FT repeat_region 2027200..2027477 FT /rpt_family="AluSx" FT repeat_region 2027478..2027523 FT /rpt_family="(GA)n" FT repeat_region 2027528..2027698 FT /rpt_family="L1MD2" FT repeat_region complement(2027727..2027971) FT /rpt_family="AluSg" FT repeat_region 2028042..2028340 FT /rpt_family="AluJb" FT repeat_region complement(2029015..2029312) FT /rpt_family="AluY" FT repeat_region complement(2029324..2029458) FT /rpt_family="FLAM_C" FT repeat_region complement(2029548..2029806) FT /rpt_family="AluJo" FT repeat_region 2029836..2030134 FT /rpt_family="AluSx" FT repeat_region 2030136..2030437 FT /rpt_family="AluSx" FT repeat_region complement(2030553..2030790) FT /rpt_family="AluY" FT repeat_region complement(2030553..2030848) FT /rpt_family="AluY" FT misc_feature complement(2030873..2030929) FT /note="BLASTX similarity to P09896 (43..61); match: 0.63, FT score: 2.8e-09; database searched: nr; 60S RIBOSOMAL FT PROTEIN L44 (L36A) pir||R6RT36 ribosomal protein L36a - rat FT >gi|206732 (M19635) ribosomal protein L36a" FT misc_feature complement(2030921..2031016) FT /note="BLASTX similarity to P09896 (13..44); match: 0.46, FT score: 2.8e-09; database searched: nr; 60S RIBOSOMAL FT PROTEIN L44 (L36A) pir||R6RT36 ribosomal protein L36a - rat FT >gi|206732 (M19635) ribosomal protein L36a" FT repeat_region 2031033..2031325 FT /rpt_family="AluY" FT repeat_region 2031335..2031463 FT /rpt_family="AluSp" FT repeat_region 2031464..2031498 FT /rpt_family="(CA)n" FT repeat_region 2031504..2031661 FT /rpt_family="AluSg/x" FT repeat_region complement(2031737..2032038) FT /rpt_family="AluSq" FT repeat_region complement(2033057..2033139) FT /rpt_family="AluJ/FLAM" FT repeat_region complement(2033150..2033198) FT /rpt_family="(TAA)n" FT repeat_region complement(2033689..2033716) FT /rpt_family="MIR" FT repeat_region 2034086..2034299 FT /rpt_family="L1MB7" FT repeat_region complement(2034322..2034622) FT /rpt_family="AluSx" FT repeat_region 2035744..2035890 FT /rpt_family="MLT1F" FT repeat_region 2035949..2036081 FT /rpt_family="AluSx" FT repeat_region 2036090..2036383 FT /rpt_family="AluSp" FT repeat_region 2036388..2036561 FT /rpt_family="AluSx" FT repeat_region complement(2036563..2036705) FT /rpt_family="AluJb" FT repeat_region complement(2036707..2037006) FT /rpt_family="AluSx" FT repeat_region complement(2037009..2037285) FT /rpt_family="AluSg" FT CDS complement(join(2039612..2039855,2040133..2040176, FT 2041039..2041203,2041839..2042033,2042426..2042521, FT 2042606..2042661,2042765..2042869,2043123..2043196, FT 2043502..2043581,2046185..2046282,2046366..2046467, FT 2046603..2046690,2050800..>2050873)) FT /codon_start=3 FT /product="Putative map kinase interacting kinase [Homo FT sapiens]" FT /note="Putative human map kinase interacting kinase homolog FT is 94% identical to mouse homolog encoded by Y11092. Human FT homolog encoded in this accession extends amino terminus of FT protein 55 residues beyond that reported for the mouse FT homolog. Amino terminal extension predicted on basis of FT alignment of ESTs AA442139 and AA160847 to this accession." FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD21217.1" FT /translation="LAGPGQKMVQKKPAELQGFHRSFKGQNPFELAFSLDQPDHGDSDF FT GLQCSARPDMPASQPIDIPDAKKRGKKKKRGRATDSFSGRFEDVYQLQEDVLGEGAHAR FT VQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY FT LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH FT PNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDK FT RCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKD FT WAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPTPMVLQRNSCAKDL FT TSFAAEAIAMNRQLAQHDEDLAEEEAAGQGQPVLVRATSRCLQLSPPSQSKLAQRRQRA FT SLSSAPVVLVGDHA" FT misc_feature complement(2041896..2042033) FT /note="DDS similarity to overlapping ESTs:~AA157440 FT zo69g05.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 592184 5' similar to WP:R166.5 CE03584 PROTEIN KINASE FT ; (244..382); 97% identity.~~AA083972 zn16e07.r1 Stratagene FT neuroepithelium NT2RAMI 937234 Homo sapiens cDNA clone FT 547620 5' similar to WP:R166.5 CE03584 PROTEIN KINASE ; FT (309..363); 96% identity." FT repeat_region complement(2042114..2042149) FT /rpt_family="GC_rich" FT repeat_region complement(2042204..2042239) FT /rpt_family="GC_rich" FT misc_feature complement(2042426..2042521) FT /note="DDS similarity to overlapping ESTs:~AA083972 FT zn16e07.r1 Stratagene neuroepithelium NT2RAMI 937234 Homo FT sapiens cDNA clone 547620 5' similar to WP:R166.5 CE03584 FT PROTEIN KINASE ; (213..308); 99% identity.~~AA157440 FT zo69g05.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 592184 5' similar to WP:R166.5 CE03584 PROTEIN KINASE FT ; (148..243); 100% identity.~~AA314786 EST186628 Colon FT carcinoma (HCC) cell line II Homo sapiens cDNA 5' end FT similar to similar to G protein-coupled receptor kinase 7; FT (298..392); 97% identity." FT misc_feature complement(2042606..2042661) FT /note="DDS similarity to overlapping ESTs:~AA314786 FT EST186628 Colon carcinoma (HCC) cell line II Homo sapiens FT cDNA 5' end similar to similar to G protein-coupled FT receptor kinase 7; (242..297); 100% identity.~~AA083972 FT zn16e07.r1 Stratagene neuroepithelium NT2RAMI 937234 Homo FT sapiens cDNA clone 547620 5' similar to WP:R166.5 CE03584 FT PROTEIN KINASE ; (158..212); 98% identity.~~AA157440 FT zo69g05.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 592184 5' similar to WP:R166.5 CE03584 PROTEIN KINASE FT ; (93..147); 98% identity." FT misc_feature complement(2042765..2042869) FT /note="DDS similarity to overlapping ESTs:~AA160847 FT zo76c08.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 592814 5' similar to WP:R166.5 CE03584 PROTEIN KINASE FT ; (279..386); 95% identity.~~AA314786 EST186628 Colon FT carcinoma (HCC) cell line II Homo sapiens cDNA 5' end FT similar to similar to G protein-coupled receptor kinase 7; FT (137..241); 100% identity.~~AA083972 zn16e07.r1 Stratagene FT neuroepithelium NT2RAMI 937234 Homo sapiens cDNA clone FT 547620 5' similar to WP:R166.5 CE03584 PROTEIN KINASE ; FT (53..157); 100% identity.~~(15575..15484) AA157440 FT zo69g05.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 592184 5' similar to WP:R166.5 CE03584 PROTEIN KINASE FT ; (1..92); 100% identity." FT misc_feature complement(2043123..2043196) FT /note="DDS similarity to overlapping ESTs:~AA160847 FT zo76c08.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 592814 5' similar to WP:R166.5 CE03584 PROTEIN KINASE FT ; (205..278); 100% identity.~~AA314786 EST186628 Colon FT carcinoma (HCC) cell line II Homo sapiens cDNA 5' end FT similar to similar to G protein-coupled receptor kinase 7; FT (63..136); 100% identity.~~(15893..15842) AA083972 FT zn16e07.r1 Stratagene neuroepithelium NT2RAMI 937234 Homo FT sapiens cDNA clone 547620 5' similar to WP:R166.5 CE03584 FT PROTEIN KINASE ; (1..52); 100% identity." FT misc_feature complement(2043502..2043581) FT /note="DDS similarity to overlapping ESTs:~AA160847 FT zo76c08.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 592814 5' similar to WP:R166.5 CE03584 PROTEIN KINASE FT ; (125..204); 100% identity.~~(16282..16221) AA314786 FT EST186628 Colon carcinoma (HCC) cell line II Homo sapiens FT cDNA 5' end similar to similar to G protein-coupled FT receptor kinase 7; (1..62); 100% identity.~~(16300..16263) FT AA442139 zw56h01.r1 Soares total fetus Nb2HF8 9w Homo FT sapiens cDNA clone 774097 5'; (363..399); 100% identity." FT repeat_region 2043706..2043994 FT /rpt_family="AluSc" FT repeat_region 2045253..2045296 FT /rpt_family="MIR" FT misc_feature complement(2046185..2046282) FT /note="DDS similarity to overlapping ESTs:~AA442139 FT zw56h01.r1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 774097 5'; (264..362); 99% identity.~~AA160847 FT zo76c08.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 592814 5' similar to WP:R166.5 CE03584 PROTEIN KINASE FT ; (27..124); 98% identity.~" FT misc_feature complement(2046366..2046467) FT /note="DDS similarity to overlapping ESTs:~AA442139 FT zw56h01.r1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 774097 5'; (162..263); 100% identity.~~(19109..19085) FT AA160847 zo76c08.r1 Stratagene pancreas (#937208) Homo FT sapiens cDNA clone 592814 5' similar to WP:R166.5 CE03584 FT PROTEIN KINASE ; (1..26); 88% identity.~" FT misc_feature complement(2046603..2046690) FT /note="DDS similarity to AA442139 zw56h01.r1 Soares total FT fetus Nb2HF8 9w Homo sapiens cDNA clone 774097 5'; FT (75..161); 99% identity.~" FT repeat_region complement(2046972..2047087) FT /rpt_family="FLAM_C" FT repeat_region 2047168..2047341 FT /rpt_family="MER20" FT misc_feature 2049844..2050302 FT /note="BLASTN similarity to AQ352070 (1..459); match: 0.98, FT score: 6.7e-179; database searched: month.na; FT CITBI-E1-2537I4.TF CITBI-E1 Homo sapiens genomic clone FT 2537I4, genomic survey sequence [Homo sapiens]" FT repeat_region 2049893..2049945 FT /rpt_family="(CA)n" FT repeat_region complement(2050721..2050750) FT /rpt_family="GC_rich" FT misc_feature complement(2050800..2050873) FT /note="DDS similarity to AA442139 zw56h01.r1 Soares total FT fetus Nb2HF8 9w Homo sapiens cDNA clone 774097 5'; (1..74); FT 100% identity.~" FT repeat_region complement(2050858..2050906) FT /rpt_family="GC_rich" FT repeat_region 2050908..2051029 FT /rpt_family="(CGGG)n" FT repeat_region complement(2051124..2051266) FT /rpt_family="(CGG)n" FT repeat_region 2052547..2052594 FT /rpt_family="LINE2" FT repeat_region complement(2052648..2052872) FT /rpt_family="MLT1C" FT repeat_region complement(2052908..2053208) FT /rpt_family="AluSg" FT repeat_region complement(2053211..2053494) FT /rpt_family="AluJo" FT repeat_region complement(2053507..2053814) FT /rpt_family="AluSp" FT repeat_region complement(2053815..2053980) FT /rpt_family="MLT1C" FT repeat_region 2054295..2054425 FT /rpt_family="AluSg" FT repeat_region 2054430..2054725 FT /rpt_family="AluY" FT repeat_region complement(2054802..2054920) FT /rpt_family="MER20" FT repeat_region complement(2055172..2055470) FT /rpt_family="AluSg" FT repeat_region complement(2055496..2055583) FT /rpt_family="MER20" FT repeat_region complement(2056047..2056174) FT /rpt_family="(CAGG)n" FT repeat_region complement(2056578..2056696) FT /rpt_family="(GGGA)n" FT repeat_region complement(2056720..2056842) FT /rpt_family="(GGA)n" FT misc_feature 2057012..2057121 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 55.000" FT repeat_region complement(2057163..2057464) FT /rpt_family="AluSp" FT misc_feature 2057527..2057649 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 52.000" FT repeat_region complement(2058833..2059117) FT /rpt_family="AluSx" FT repeat_region complement(2059119..2059239) FT /rpt_family="AluJb" FT repeat_region complement(2060236..2060541) FT /rpt_family="AluSx" FT repeat_region 2060603..2060996 FT /rpt_family="MLT1D" FT repeat_region complement(2061270..2061466) FT /rpt_family="GC_rich" FT repeat_region complement(2062561..2062645) FT /rpt_family="MLT1D" FT repeat_region complement(2062846..2062954) FT /rpt_family="AluSg/x" FT repeat_region complement(2062974..2063142) FT /rpt_family="AluSx" FT repeat_region complement(2063148..2063313) FT /rpt_family="AluY" FT repeat_region complement(2063317..2063570) FT /rpt_family="AluSq" FT repeat_region complement(2063571..2063702) FT /rpt_family="AluSq/x" FT repeat_region complement(2063703..2064001) FT /rpt_family="AluSx" FT repeat_region complement(2064018..2064101) FT /rpt_family="L1P5" FT repeat_region 2064172..2064386 FT /rpt_family="AluSg/x" FT misc_feature 2064437..2064547 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 56.000" FT misc_feature 2064775..2064980 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 53.000" FT repeat_region 2065323..2065613 FT /rpt_family="L1MB7" FT repeat_region 2065621..2065909 FT /rpt_family="AluSx" FT repeat_region 2065913..2066194 FT /rpt_family="AluSg1" FT repeat_region complement(2066359..2066600) FT /rpt_family="AluY" FT repeat_region 2066650..2066950 FT /rpt_family="AluSg" FT repeat_region 2066963..2067262 FT /rpt_family="AluSg" FT repeat_region 2067319..2067611 FT /rpt_family="AluJo" FT repeat_region complement(2067677..2067736) FT /rpt_family="L1MB7" FT repeat_region 2067740..2068028 FT /rpt_family="AluSx" FT repeat_region complement(2068161..2068408) FT /rpt_family="AluY" FT repeat_region complement(2068574..2068731) FT /rpt_family="AluJb" FT repeat_region 2068733..2068782 FT /rpt_family="MER58A" FT repeat_region 2068783..2069071 FT /rpt_family="AluSg" FT repeat_region 2069073..2069194 FT /rpt_family="MER58A" FT repeat_region 2069200..2069504 FT /rpt_family="AluSx" FT repeat_region 2069520..2069785 FT /rpt_family="AluSq" FT repeat_region 2070109..2070402 FT /rpt_family="AluSx" FT repeat_region 2070403..2070534 FT /rpt_family="AluYa5" FT repeat_region complement(2070720..2070860) FT /rpt_family="AluSg/x" FT repeat_region 2070862..2070955 FT /rpt_family="POLY_A" FT misc_feature 2071034..2071983 FT /note="DDS similarity to overlapping ESTs:~(2880..3275) FT D80796|HUM107A09A Human fetal brain cDNA 3'-end GEN-107A09. FT Score: 734 Identity: 377/387 (97%).~~(2889..3425) W67745 FT zd39d01.s1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 343009 3'; Score: 1008 Identity: 531/543 FT (97%).~~(3514..2913) W68025 zd39d01.r1 Soares fetal heart FT NbHH19W Homo sapiens cDNA clone 343009 5'; Score: 959 FT Identity: 566/613 (92%).~~(3581..3220) AA298130 EST113696 FT Monocytes, stimulated II Homo sapiens cDNA; Score: 700 FT Identity: 356/362 (98%).~~(3793..3233) AA278450 zs81g09.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:703936 5'; FT Score: 1055 Identity: 550/566 (97%).~~(3455..3838) FT AA279683 zs92b04.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:704911 5' similar to gb:X14008_rna1 LYSOZYME C FT PRECURSOR (HUMAN); Score: 744 Identity: 381/384 FT (99%).~~Additional EST matches:~AA279136, N59077, H51258, FT H19669, H44224, AI028594" FT misc_feature complement(2071156..2071349) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 57.000" FT CDS complement(join(<2071156..2071349,2076781..2077012, FT 2078139..>2078586)) FT /codon_start=1 FT /product="R26660_1, partial CDS" FT /note="Hypothetical human protein; Most similar to FT (AL021687) putative protein [Arabidopsis thaliana] FT >gi|2832633|gnl|PID|e1249651 (AL021711) putative protein FT [Arabidopsis thaliana], S48466 hypothetical protein YIL106w FT - yeast (Saccharomyces cerevisiae) >gi|558700 (Z38125) orf, FT len: 236, CAI: 0.11, possibly spliced [Saccharomyces FT cerevisiae], and P40484|MOB1_YEAST MOB1 PROTEIN (MPS1 FT BINDER 1) >gi|763240 (Z47047) unknown [Saccharomyces FT cerevisiae]" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC27672.1" FT /translation="KSRRAGVTKMSNPFLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQ FT ASLNAGLDLRLAVQLPPGEDLNDWVAVHVVDFFNRVNLIYGTISDGCTEQSCPVMSGGP FT KYEYRWQDEHKFRKPTALSAPRYMDLLMDWIEAQINNEDLFPTNVGTPFPKNFLQTVRK FT ILSRLFRVFVHVYIHHFDRIAQMGSEAHVNTCYKHFYYFVKEFGLIDTKELEPLVRGLG FT AEGVRNHQVRHLEPPGEGPPSRALKELHEIRNCLMKCISLYLEDEAQTPTPLSPPGLGM FT SPAARPRSFP" FT repeat_region 2071897..2072154 FT /rpt_family="AluY" FT repeat_region 2072158..2072452 FT /rpt_family="AluSx" FT repeat_region 2072639..2072757 FT /rpt_family="FLAM_C" FT repeat_region 2073608..2073748 FT /rpt_family="MER58A" FT repeat_region 2073749..2074046 FT /rpt_family="AluSx" FT repeat_region 2074047..2074246 FT /rpt_family="AluSc" FT repeat_region 2074247..2074270 FT /rpt_family="(CAAA)n" FT repeat_region 2074276..2074333 FT /rpt_family="MER58A" FT repeat_region 2074355..2074427 FT /rpt_family="(GAAAA)n" FT repeat_region complement(2074548..2074718) FT /rpt_family="AluSg/x" FT repeat_region complement(2074719..2075015) FT /rpt_family="AluSg" FT repeat_region complement(2075027..2075328) FT /rpt_family="AluJb" FT repeat_region 2075360..2075525 FT /rpt_family="AluJo" FT repeat_region 2075843..2076141 FT /rpt_family="AluSx" FT repeat_region 2076146..2076448 FT /rpt_family="AluY" FT misc_feature complement(2076810..2076983) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 2077121..2077420 FT /rpt_family="AluSx" FT repeat_region complement(2077788..2078082) FT /rpt_family="AluJo" FT misc_feature complement(2078139..2078586) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 91.000" FT repeat_region complement(2078760..2079047) FT /rpt_family="AluJb" FT repeat_region 2079461..2079673 FT /rpt_family="MLT1C" FT repeat_region complement(2080382..2080673) FT /rpt_family="AluSx" FT repeat_region complement(2080750..2080862) FT /rpt_family="MLT1D" FT repeat_region 2080863..2081134 FT /rpt_family="AluJo" FT repeat_region 2081305..2081600 FT /rpt_family="AluSx" FT repeat_region 2081603..2081902 FT /rpt_family="AluSg" FT repeat_region complement(2082194..2082232) FT /rpt_family="MIR" FT repeat_region complement(2082237..2082438) FT /rpt_family="MER20" FT repeat_region complement(2082809..2083145) FT /rpt_family="AluJo" FT misc_feature 2083156..2083283 FT /note="BLASTN similarity to cpg254b3.ft1a (161..289); FT match: 0.93, score: 4.7e-41; database searched: Sanger CpG; FT bases 101 to 420 (SL to QR)" FT misc_feature complement(2083612..2083916) FT /note="BLASTN similarity to cpg254b3.rt1a (27..333); match: FT 0.96, score: 2.2e-109; database searched: Sanger CpG; bases FT 82 to 416 (SL to QR)" FT repeat_region complement(2083926..2084069) FT /rpt_family="AluJb" FT CDS join(<2084101..2084201,2097013..2097161,2097251..2097331, FT 2097423..2097494,2097928..2097954,2098051..2098126, FT 2098286..2098333,2098435..2098449,2099254..2099344) FT /codon_start=1 FT /product="R26660_2, partial CDS" FT /note="Hypothetical human protein with no significant FT similarity to known proteins; 5'-end of hypothetical CDS FT not identified" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC27671.1" FT /translation="LVYQTHTKTVPENKTGQPEELVNFLLACLSPFRSNFSKKFSFYRH FT HVNFKSWWVGDIPVSGALLTDWSDDTMKELHLAIPAKITREKLDQVATAVYQMMDQLYQ FT GKMYFPGYFPNELRNIFREQVHLIQNAIIESRIDCQHRCGIFQYETISCNNCTDSHVAC FT FGYNCESSAQWKSAVQGLLNYINNWHNLVSPALRCLEPPHLANLTLEDAAECLKQH" FT misc_feature 2084101..2084201 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 74.000" FT repeat_region 2084211..2084504 FT /rpt_family="AluSx" FT repeat_region complement(2084588..2084887) FT /rpt_family="AluSg" FT repeat_region complement(2084891..2085022) FT /rpt_family="AluJo/FLAM" FT repeat_region 2085684..2085982 FT /rpt_family="AluY" FT repeat_region complement(2086037..2086338) FT /rpt_family="AluSq" FT repeat_region complement(2086358..2086656) FT /rpt_family="AluSx" FT repeat_region complement(2086794..2087084) FT /rpt_family="AluJo" FT repeat_region complement(2087215..2087369) FT /rpt_family="L1MB5" FT repeat_region 2087370..2087661 FT /rpt_family="AluJo" FT repeat_region 2088048..2088262 FT /rpt_family="MER20" FT repeat_region complement(2088301..2088454) FT /rpt_family="AluJb" FT repeat_region complement(2088465..2088765) FT /rpt_family="AluSg" FT repeat_region complement(2088766..2088900) FT /rpt_family="AluJo" FT repeat_region complement(2089363..2089560) FT /rpt_family="MER20" FT repeat_region complement(2089805..2089995) FT /rpt_family="MER20" FT repeat_region 2090390..2090544 FT /rpt_family="MER20" FT repeat_region complement(2090667..2090960) FT /rpt_family="AluY" FT repeat_region complement(2091386..2091680) FT /rpt_family="AluSx" FT repeat_region 2091720..2092018 FT /rpt_family="AluSg" FT repeat_region complement(2092089..2092399) FT /rpt_family="AluJb" FT repeat_region 2092499..2092772 FT /rpt_family="AluSq" FT repeat_region complement(2093161..2093333) FT /rpt_family="AluSx" FT repeat_region complement(2093517..2093646) FT /rpt_family="AluSx" FT repeat_region complement(2093647..2093700) FT /rpt_family="MER33" FT repeat_region complement(2094044..2094345) FT /rpt_family="AluY" FT repeat_region 2094363..2094405 FT /rpt_family="(CCAA)n" FT repeat_region 2094888..2095194 FT /rpt_family="AluSq" FT repeat_region complement(2095749..2096042) FT /rpt_family="AluSq" FT repeat_region complement(2096184..2096315) FT /rpt_family="(CGG)n" FT misc_feature 2097013..2097161 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 73.000" FT misc_feature 2097251..2097331 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(29116..29186) AA009257 FT mh02g07.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus FT cDNA clone 441372 5'; (1..71); 85% FT identity.~~(29121..29186) H19402 ym46h01.r1 Homo sapiens FT cDNA clone; (1..66); 92% identity.~~(29123..29186) W89800 FT mf75f06.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus FT cDNA clone 420131 5'; (1..64); 88% identity.~" FT misc_feature 2097423..2097494 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 82.000~~DDS similarity FT to overlapping ESTs:~AA009257 mh02g07.r1 Soares mouse FT embryo NbME13.5 14.5 Mus musculus cDNA clone 441372 5'; FT (72..143); 89% identity.~~H19402 ym46h01.r1 Homo sapiens FT cDNA clone; (67..138); 100% identity.~~W89800 mf75f06.r1 FT Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA clone FT 420131 5'; (65..136); 89% identity.~~(29309..29349) T19190 FT g05003s Testis 2 Homo sapiens cDNA clone g05003 5' end; FT (1..41); 100% identity." FT misc_feature 2097928..2097954 FT /note="DDS similarity to overlapping ESTs:~(29783..29809) FT AA009257 mh02g07.r1 Soares mouse embryo NbME13.5 14.5 Mus FT musculus cDNA clone 441372 5'; (144..170); 85% FT identity.~~(29789..29809) W89800 mf75f06.r1 Soares mouse FT embryo NbME13.5 14.5 Mus musculus cDNA clone 420131 5'; FT (137..163); 85% identity.~~(29789..29809) T19190 g05003s FT Testis 2 Homo sapiens cDNA clone g05003 5' end; (42..68); FT 100% identity. ~~(29783..30025) H19402 ym46h01.r1 Homo FT sapiens cDNA clone; (139..384); 94% FT identity.~~(29783..29981) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 79.000" FT misc_feature 2098051..2098126 FT /note="DDS similarity to overlapping ESTs:~(29906..29981) FT AA009257 mh02g07.r1 Soares mouse embryo NbME13.5 14.5 Mus FT musculus cDNA clone 441372 5'; (171..246); 86% FT identity.~~(29906..29981) T19190 g05003s Testis 2 Homo FT sapiens cDNA clone g05003 5' end; (69..144); 99% FT identity.~~(29906..29977) W89800 mf75f06.r1 Soares mouse FT embryo NbME13.5 14.5 Mus musculus cDNA clone 420131 5'; FT (164..235); 86% identity." FT misc_feature 2098286..2098333 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 89.000~~DDS similarity FT to overlapping ESTs:~AA009257 mh02g07.r1 Soares mouse FT embryo NbME13.5 14.5 Mus musculus cDNA clone 441372 5'; FT (247..294); 85% identity.~~W89800 mf75f06.r1 Soares mouse FT embryo NbME13.5 14.5 Mus musculus cDNA clone 420131 5'; FT (236..283); 88% identity.~~T19190 g05003s Testis 2 Homo FT sapiens cDNA clone g05003 5' end; (145..192); 98% FT identity." FT misc_feature 2098435..2098449 FT /note="DDS similarity to overlapping ESTs:~W89800 FT mf75f06.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus FT cDNA clone 420131 5'; (284..298); 87% identity.~~T19190 FT g05003s Testis 2 Homo sapiens cDNA clone g05003 5' end; FT (193..207); 100% identity.~~(30290..30326) AA009257 FT mh02g07.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus FT cDNA clone 441372 5'; (295..331); 76% identity." FT misc_feature 2099254..2099376 FT /note="DDS similarity to T19190 g05003s Testis 2 Homo FT sapiens cDNA clone g05003 5' end; (208..333); 90% FT identity.~~" FT misc_feature 2100647..2101545 FT /note="DDS similarity to overlapping ESTs:~(32502..33180) FT AA167736 zq40d04.s1 Stratagene hNT neuron (#937233) Homo FT sapiens cDNA clone 632167 3'.~Score: 1207 Identity: FT 655/674 (97%).~~(32843..33400) AA088860 zl90f06.s1 FT Stratagene colon (#937204) Homo sapiens cDNA clone 511907 FT 3'; Score: 1010 Identity: 541/560 (96%).~~Additional EST FT matches:~W63772, W86477, T26412, AA305631, H73448, H28923, FT AA167830, and many others~" FT mRNA <2101054..2102267 FT /product="Homo sapiens delta-adaptin mRNA" FT /note="Human AP-3 complex delta subunit mRNA" FT CDS complement(2102172..>2102267) FT /codon_start=1 FT /product="delta-adaptin, partial CDS" FT /note="subunit of putative vesicle coat adaptor complex FT AP-3; Putative human homolog of bovine leukemia virus FT receptor" FT /protein_id="AAC27670.1" FT /translation="GENSVSVDGKCSDSTLLSNLLEEMKATLAKC" FT misc_feature complement(2102172..2102267) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 84.000" FT repeat_region 2102311..2102443 FT /rpt_family="AluSq" FT repeat_region 2102446..2102742 FT /rpt_family="AluY" FT repeat_region 2102743..2102782 FT /rpt_family="(TAAA)n" FT repeat_region 2102784..2102966 FT /rpt_family="AluSq" FT repeat_region 2102977..2103142 FT /rpt_family="FRAM" FT mRNA complement(2100995..>2138713) FT /product="Homo sapiens delta-adaptin mRNA" FT /note="Human AP-3 complex delta subunit mRNA" FT CDS complement(join(2102172..2102267,2108686..2108765, FT 2109085..2109206,2109872..2109957,2110135..2110223, FT 2110706..2110895,2111284..2111331,2111678..2111827, FT 2112859..2112930,2113335..2113412,2114124..2114301, FT 2114747..2114820,2115218..2115417,2115537..2115612, FT 2116206..2116277,2116604..2116745,2117221..2117366, FT 2118600..2118831,2120861..2121091,2121162..2121310, FT 2121733..2121878,2123357..2123405,2123829..2123878, FT 2127151..2127200,2129089..2129120,2130501..2130536, FT 2132470..2132577,2137010..2137090,2137726..2137806, FT 2138618..>2138713)) FT /codon_start=1 FT /product="AP-3 complex delta subunit, partial CDS" FT /note="vesicle coat component, similar to alpha and gamma FT adaptins" FT /protein_id="AAC34214.1" FT /translation="AKYISQCIDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAF FT NIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDLSSPSQYDTGVALTGLS FT CFVTPDLARDLANDIMTLMSHTKPYIRKKALIEPLTNLIHSTSAMSLLYECVNTVIAVL FT ISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLIL FT QCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICS FT QSNYQYITNFEWYISILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRKFAVSQMSALLD FT SAHLLASSTQRNGICEVLYAAAWICGEFSEHLQEPHHTLEAMLRPRVTTLPGHIQAVYV FT QNVVKLYASILQQKEQAGEAEGAQAVTQLMVDRLPQFVQSADLEVQERASCILQLVKHI FT QKLQAKDVPVAEEVSALFAGELNPVAPKAQKKVPVPEGLDLDAWINEPLSDSESEDERP FT RAVFHEEEQRRPKHRPSEADEEELARRREARKQEQANNPFYIKSSPSPQKRYQDTPGVE FT HIPVVQIDLSVPLKVPGLPMSDQYVKLEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSS FT LPTESDEDIAPAQQVDIVTEEMPENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPI FT QKHRNTETSKSPEKDVPMVEKKSKKPKKKEKKHKEKERDKEKKKEKEKKAEDLDFWLST FT TPPPAPAPAPAPVPSTDECEDAKTEAQGEEDDAEGQDQDKKSPKPKKKKHRKEKEERTK FT GKKKSKKQPPGSEEAAGEPVQNGAPEEEQLPPESSYSLLAENSYVKMTCDIRGSLQEDS FT QVTVAIVLENRSSSILKGMELSVLDSLNARMARPQGSSVHDGVPVPFQLPPGVSNEAQY FT VFTIQSIVMAQKLKGTLSFIAKNDEGATHEKLDFRLHFSCSSYLITTPCYSDAFAKLLE FT SGDLSMSSIKVDGIRMSFQNLLAKICFHHHFSVVERVDSCASMYSRSIQGHHVCLLVKK FT GENSVSVDGKCSDSTLLSNLLEEMKATLAKC" FT CDS complement(join(2102172..2102267,2108686..2108765, FT 2109085..2109206,2109872..2109957,2110135..2110223, FT 2110706..2110895,2111284..2111331,2111678..2111827, FT 2114124..2114301,2114747..2114820,2115218..2115417, FT 2115537..2115612,2116206..2116277,2116604..2116745, FT 2117221..2117366,2118600..2118831,2120861..2121091, FT 2121162..2121310,2121733..2121878,2123357..2123405, FT 2123829..2123878,2127151..2127200,2129089..2129162, FT 2129317..2129456,2130407..2130536,2132470..2132577, FT 2137010..2137090,2137726..2137806,2138618..>2138713)) FT /codon_start=1 FT /product="delta-adaptin, partial CDS" FT /function="vesicle coat component" FT /function="similar to alpha and gamma adaptins" FT /note="AP-3 complex delta subunit; Human homolog of mouse FT bovine leukemia virus receptor" FT /protein_id="AAC34212.1" FT /translation="AKYISQCIDEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAF FT NIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDLSSPSQYDTGVALTGLS FT CFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPAFPRLKEKLEDP FT DPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPR FT LGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIE FT DSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKN FT LMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYISILVELTRLEGT FT RHGHLIAAQMLDVAIRVKAIRKFAVSQMSALLDSAHLLASSTQRNGICEVLYAAAWICG FT EFSEHLQEPHHTLEAMLRPRVTTLPGHIQAVYVQNVVKLYASILQQKEQAGEAEGAQAV FT TQLMVDRLPQFVQSADLEVQERASCILQLVKHIQKLQAKDVPVAEEVSALFAGELNPVA FT PKAQKKVPVPEGLDLDAWINEPLSDSESEDERPRAVFHEEEQRRPKHRPSEADEEELAR FT RREARKQEQANNPFYIKSSPSPQKRYQDTPGVEHIPVVQIDLSVPLKVPGLPMSDQYVK FT LEEERRHRQKLEKDKRRKKRKEKEKKGKRRHSSLPTESDEDIAPAQQVDIVTEEMPENA FT LPSDEDDKDPNDPYRALDIDLDKPLADSEKLPIQKHRNTETSKSPEKDVPMVEKKSKKP FT KKKEKKHKEKERDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKSKKQPPGSEEAAG FT EPVQNGAPEEEQLPPESSYSLLAENSYVKMTCDIRGSLQEDSQVTVAIVLENRSSSILK FT GMELSVLDSLNARMARPQGSSVHDGVPVPFQLPPGVSNEAQYVFTIQSIVMAQKLKGTL FT SFIAKNDEGATHEKLDFRLHFSCSSYLITTPCYSDAFAKLLESGDLSMSSIKVDGIRMS FT FQNLLAKICFHHHFSVVERVDSCASMYSRSIQGHHVCLLVKKGENSVSVDGKCSDSTLL FT SNLLEEMKATLAKC" FT repeat_region complement(2104669..2104972) FT /rpt_family="AluJo" FT repeat_region complement(2105224..2105731) FT /rpt_family="MER9" FT repeat_region 2105814..2106103 FT /rpt_family="AluSg" FT repeat_region 2106131..2106278 FT /rpt_family="L1MB5" FT repeat_region 2106279..2106565 FT /rpt_family="AluSx" FT repeat_region 2106569..2106925 FT /rpt_family="L1MB5" FT repeat_region 2106981..2107275 FT /rpt_family="AluY" FT repeat_region 2107458..2107758 FT /rpt_family="AluY" FT misc_feature complement(2108686..2108765) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 90.000~~DDS similarity FT to AA630776 ac14c10.s1 Stratagene HeLa cell s3 937216 Homo FT sapiens cDNA clone 856434 3' similar to TR:G163328 G163328 FT LEUKEMIA VIRUS CELL RECEPTOR. ; (342..263); 100% identity." FT misc_feature complement(2109085..2109206) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 92.000~~DDS similarity FT to overlapping ESTs:~AA630776 ac14c10.s1 Stratagene HeLa FT cell s3 937216 Homo sapiens cDNA clone 856434 3' similar to FT TR:G163328 G163328 LEUKEMIA VIRUS CELL RECEPTOR. ; FT (463..343); 99% identity.~~(10330..10248) AA452948 FT zx36b04.r1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 788527 5' similar to TR:G163328 G163328 LEUKEMIA FT VIRUS CELL RECEPTOR. ; (396..477); 98% FT identity.~~(10330..10210) R54523 yg75d08.r1 Homo sapiens FT cDNA clone 39286 5' similar to SP:A45716 A45716 LEUKEMIA FT VIRUS CELL RECEPTOR ; (331..461); 88% identity." FT repeat_region 2109406..2109683 FT /rpt_family="MLT1B" FT misc_feature complement(2109872..2109957) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA630776 ac14c10.s1 FT Stratagene HeLa cell s3 937216 Homo sapiens cDNA clone FT 856434 3' similar to TR:G163328 G163328 LEUKEMIA VIRUS CELL FT RECEPTOR. ; (548..464); 96% identity.~~AA452948 zx36b04.r1 FT Soares total fetus Nb2HF8 9w Homo sapiens cDNA clone 788527 FT 5' similar to TR:G163328 G163328 LEUKEMIA VIRUS CELL FT RECEPTOR. ; (310..395); 100% identity.~~R54523 yg75d08.r1 FT Homo sapiens cDNA clone 39286 5' similar to SP:A45716 FT A45716 LEUKEMIA VIRUS CELL RECEPTOR ; (244..330); 99% FT identity." FT misc_feature complement(2110135..2110223) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(11296..11259) AA630776 FT ac14c10.s1 Stratagene HeLa cell s3 937216 Homo sapiens cDNA FT clone 856434 3' similar to TR:G163328 G163328 LEUKEMIA FT VIRUS CELL RECEPTOR. ; (587..549); 82% identity.~~AA452948 FT zx36b04.r1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 788527 5' similar to TR:G163328 G163328 LEUKEMIA FT VIRUS CELL RECEPTOR. ; (223..309); 95% identity.~~R54523 FT yg75d08.r1 Homo sapiens cDNA clone 39286 5' similar to FT SP:A45716 A45716 LEUKEMIA VIRUS CELL RECEPTOR ; (155..243); FT 100% identity." FT misc_feature complement(2110706..2110895) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 96.000~~(11983..11830) FT DDS similarity to R54523 yg75d08.r1 Homo sapiens cDNA clone FT 39286 5' similar to SP:A45716 A45716 LEUKEMIA VIRUS CELL FT RECEPTOR ; (1..154); 97% identity." FT misc_feature complement(2111284..2111603) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 55.000" FT misc_feature complement(2111678..2111827) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(2111747..2111812) FT /rpt_family="(GAA)n" FT repeat_region 2112106..2112680 FT /rpt_family="L1MB7" FT repeat_region complement(2113346..2113376) FT /rpt_family="GC_rich" FT repeat_region complement(2114124..2114214) FT /rpt_family="(GAA)n" FT misc_feature complement(2114124..2114301) FT /note="DDS similarity to overlapping ESTs:~(15425..15317) FT AA076635 zm20h02.s1 Stratagene pancreas (#937208) Homo FT sapiens cDNA clone 526227 ~3' similar to TR:G861464 G861464 FT BOVINE LEUKEMIA VIRUS CELL RECEPTOR ; (109..1); 100% FT identity.~~(15425..15337) AA639983 np29e05.s1 NCI_CGAP_Pr22 FT Homo sapiens cDNA clone IMAGE:1117760 similar to TR:G861464 FT G861464 BOVINE LEUKEMIA VIRUS CELL RECEPTOR ; (89..1); 99% FT identity.~~(15417..15248) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 100.000~~Additional EST matches: AA157091" FT misc_feature complement(2114747..2114820) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 99.000~~DDS similarity FT to overlapping ESTs:~AA076635 zm20h02.s1 Stratagene FT pancreas (#937208) Homo sapiens cDNA clone 526227 3' FT similar to TR:G861464 G861464 BOVINE LEUKEMIA VIRUS CELL FT RECEPTOR ; (182..110); 97% identity.~~AA639983 np29e05.s1 FT NCI_CGAP_Pr22 Homo sapiens cDNA clone IMAGE:1117760 similar FT to TR:G861464 G861464 BOVINE LEUKEMIA VIRUS CELL RECEPTOR ; FT (161..90); 97% identity.~~Additional EST matches: AA157091" FT misc_feature complement(2115218..2115417) FT /note="DDS similarity to overlapping ESTs:~(16541..16363) FT AA639983 np29e05.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1117760 similar to TR:G861464 G861464 BOVINE LEUKEMIA FT VIRUS CELL RECEPTOR ; (361..162); 100% FT identity.~~(16541..16363) AA452948 zx36b04.r1 Soares total FT fetus Nb2HF8 9w Homo sapiens cDNA clone 788527 5' similar FT to TR:G163328 G163328 LEUKEMIA VIRUS CELL RECEPTOR. ; FT (44..222); 100% identity.~~(16541..16342) AA076635 FT zm20h02.s1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 526227 ~3' similar to TR:G861464 G861464 BOVINE FT LEUKEMIA VIRUS CELL RECEPTOR ; (382..183); 99% FT identity.~~(16541..16342) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 100.000~~Additional EST matches: AA157091" FT repeat_region complement(2115305..2115392) FT /rpt_family="(GAA)n" FT misc_feature complement(2115537..2115612) FT /note="DDS similarity to overlapping ESTs:~(16736..16661) FT AA639983 np29e05.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1117760 similar to TR:G861464 G861464 BOVINE LEUKEMIA FT VIRUS CELL RECEPTOR ; (437..362); 100% FT identity.~~(16703..16661) AA452948 zx36b04.r1 Soares total FT fetus Nb2HF8 9w Homo sapiens cDNA clone 788527 5' similar FT to TR:G163328 G163328 LEUKEMIA VIRUS CELL RECEPTOR. ; FT (1..43); 100% identity.~~(16719..16661) AA076635 zm20h02.s1 FT Stratagene pancreas (#937208) Homo sapiens cDNA clone FT 526227 ~3' similar to TR:G861464 G861464 BOVINE LEUKEMIA FT VIRUS CELL RECEPTOR ; (441..383); 98% FT identity.~~(16736..16629) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: good, score: FT 70.000~~Additional EST matches: AA157091" FT misc_feature complement(2116206..2116277) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 90.000~~DDS similarity FT to AA639983 np29e05.s1 NCI_CGAP_Pr22 Homo sapiens cDNA FT clone IMAGE:1117760 similar to TR:G861464 G861464 BOVINE FT LEUKEMIA VIRUS CELL RECEPTOR ; (509..438); 100% identity." FT misc_feature complement(2116604..2116745) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to ~(17799..17728) AA639983 np29e05.s1 FT NCI_CGAP_Pr22 Homo sapiens cDNA clone IMAGE:1117760 similar FT to TR:G861464 G861464 BOVINE LEUKEMIA VIRUS CELL RECEPTOR ; FT (581..510); 98% identity." FT misc_feature complement(2117221..2117348) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 2117877..2118180 FT /rpt_family="AluSq" FT misc_feature complement(2118600..2118783) FT /note="DDS similarity to AA340657 EST45904 Fetal kidney I FT Homo sapiens cDNA 5' end; (200..406); 92% FT identity.~~(19907..19724) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 98.000" FT repeat_region 2119276..2119406 FT /rpt_family="AluSg" FT repeat_region 2119411..2119718 FT /rpt_family="AluY" FT repeat_region 2119722..2119972 FT /rpt_family="AluSq" FT misc_feature complement(2120861..2121091) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to~(22184..21985) AA340657 EST45904 Fetal kidney FT I Homo sapiens cDNA 5' end; (1..199); 93% identity.~" FT misc_feature complement(2121141..2121310) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to~(22434..22343) A121096 zm22e06.r1 Stratagene FT pancreas (#937208) Homo sapiens cDNA clone 526402 5' FT similar to TR:E236697 E236697 HYPOTHETICAL 93.6 KD PROTEIN. FT ; (318..412); 97% identity" FT misc_feature complement(2121733..2121878) FT /note="DDS similarity to AA121096 zm22e06.r1 Stratagene FT pancreas (#937208) Homo sapiens cDNA clone 526402 ~5' FT similar to TR:E236697 E236697 HYPOTHETICAL 93.6 KD PROTEIN. FT ; (172..317); 100% identity.~~(23002..22844) predicted FT exon, program: grail2exons_human_1.3, frame: 0, quality: FT excellent, score: 100.000" FT repeat_region 2122469..2122759 FT /rpt_family="MER44A" FT misc_feature complement(2123357..2123405) FT /note="DDS similarity to AA121096 zm22e06.r1 Stratagene FT pancreas (#937208) Homo sapiens cDNA clone 526402 ~5' FT similar to TR:E236697 E236697 HYPOTHETICAL 93.6 KD PROTEIN. FT ; (123..171); 100% identity.~~" FT misc_feature complement(2123829..2123878) FT /note="DDS similarity to AA121096 zm22e06.r1 Stratagene FT pancreas (#937208) Homo sapiens cDNA clone 526402 ~5' FT similar to TR:E236697 E236697 HYPOTHETICAL 93.6 KD PROTEIN. FT ; (73..122); 96% identity.~~(25042..24953) predicted exon, FT program: grail2exons_human_1.3, frame: 1, quality: good, FT score: 62.000" FT repeat_region complement(2124086..2124406) FT /rpt_family="MER68A" FT repeat_region 2124615..2124657 FT /rpt_family="L1PB2" FT repeat_region 2124658..2124934 FT /rpt_family="AluSp" FT repeat_region 2124958..2125139 FT /rpt_family="L1PB2" FT repeat_region complement(2125312..2125617) FT /rpt_family="AluSq" FT repeat_region 2125864..2126127 FT /rpt_family="AluJo" FT repeat_region complement(2126128..2126186) FT /rpt_family="AluJo/F(R)AM" FT repeat_region 2126373..2126670 FT /rpt_family="AluSg" FT misc_feature 2127151..2127200 FT /note="DDS similarity to AA121096 zm22e06.r1 Stratagene FT pancreas (#937208) Homo sapiens cDNA clone 526402 ~5' FT similar to TR:E236697 E236697 HYPOTHETICAL 93.6 KD PROTEIN. FT ; (23..72); 100% identity." FT repeat_region complement(2127522..2127825) FT /rpt_family="AluSx" FT repeat_region complement(2127842..2128066) FT /rpt_family="MER7B" FT repeat_region complement(2128576..2128634) FT /rpt_family="GC_rich" FT repeat_region complement(2128853..2129073) FT /rpt_family="GC_rich" FT misc_feature complement(2129089..2129162) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 68.000~~DDS similarity to FT ~(30286..30267) AA312481 EST183215 Jurkat T-cells VI Homo FT sapiens cDNA 5' end; (298..317); 100% identity." FT misc_feature complement(2129317..2129456) FT /note="DDS similarity to AA312481 EST183215 Jurkat T-cells FT VI Homo sapiens cDNA 5' end; (158..297); 100% FT identity.~~(30580..30404) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 100.000" FT misc_feature 2130407..2130536 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 97.000~~DDS similarity FT to overlapping ESTs:~AA312481 EST183215 Jurkat T-cells VI FT Homo sapiens cDNA 5' end; (28..157); 100% FT identity.~~AA326194 EST29340 Cerebellum II Homo sapiens FT cDNA 5' end similar to similar to adaptin, gamma; FT (168..298); 99% identity." FT misc_feature complement(2132470..2132577) FT /note="DDS similarity to overlapping ESTs:~AA326194 FT EST29340 Cerebellum II Homo sapiens cDNA 5' end similar to FT similar to adaptin, gamma; (60..167); 98% FT identity.~~(33620..33594) AA312481 EST183215 Jurkat T-cells FT VI Homo sapiens cDNA 5' end; (1..27); 100% identity." FT repeat_region complement(2133511..2133800) FT /rpt_family="AluSg" FT repeat_region 2133827..2134116 FT /rpt_family="AluSc" FT repeat_region 2134139..2134439 FT /rpt_family="AluJb" FT repeat_region 2134454..2134587 FT /rpt_family="AluSg" FT repeat_region complement(2134607..2134899) FT /rpt_family="AluSx" FT repeat_region complement(2134904..2134926) FT /rpt_family="AT_rich" FT repeat_region 2134940..2135219 FT /rpt_family="AluSx" FT repeat_region 2135253..2135553 FT /rpt_family="AluSx" FT misc_feature 2136929..2137108 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 54.000" FT misc_feature complement(2137010..2137068) FT /note="DDS similarity to AA326194 EST29340 Cerebellum II FT Homo sapiens cDNA 5' end similar to similar to adaptin, FT gamma; (1..59); 100% identity." FT repeat_region complement(2137314..2137594) FT /rpt_family="AluSx" FT repeat_region 2137595..2137686 FT /rpt_family="Alu" FT misc_feature complement(2137726..2137808) FT /note="BLASTN similarity to T30164 (129..211); match: 0.98, FT score: 5.4e-64; database searched: est; EST12242 Homo FT sapiens cDNA 5' end similar to similar to adaptin.~~BLASTN FT similarity to T04876 (162..231); match: 0.97, score: FT 6.6e-58; database searched: est; EST02764 Homo sapiens cDNA FT clone HFBCB09." FT misc_feature complement(2138615..2138715) FT /note="BLASTN similarity to T30164 (33..133); match: 0.99, FT score: 5.4e-64; database searched: est; EST12242 Homo FT sapiens cDNA 5' end similar to similar to adaptin.~~BLASTN FT similarity to T04876 (66..166); match: 0.99, score: FT 6.6e-58; database searched: est; EST02764 Homo sapiens cDNA FT clone HFBCB09." FT repeat_region 2138779..2139078 FT /rpt_family="AluSg" FT repeat_region 2139087..2139274 FT /rpt_family="L1MB5" FT repeat_region 2140153..2140452 FT /rpt_family="L1ME" FT repeat_region complement(2140480..2140639) FT /rpt_family="AluJb" FT repeat_region complement(2140757..2141057) FT /rpt_family="AluSx" FT repeat_region complement(2141436..2141738) FT /rpt_family="AluSc" FT repeat_region complement(2141739..2141920) FT /rpt_family="AluJb" FT repeat_region 2141930..2142029 FT /rpt_family="(TA)n" FT repeat_region complement(2142030..2142312) FT /rpt_family="AluSx" FT repeat_region complement(2142318..2142390) FT /rpt_family="AluJb" FT repeat_region complement(2142318..2142447) FT /rpt_family="AluJ" FT repeat_region complement(2142759..2143062) FT /rpt_family="AluSp" FT repeat_region complement(2143063..2143234) FT /rpt_family="AluSg/x" FT repeat_region complement(2143238..2143538) FT /rpt_family="AluY" FT repeat_region complement(2143541..2143580) FT /rpt_family="AluSg/x" FT repeat_region 2143582..2143780 FT /rpt_family="AluJb" FT repeat_region 2143805..2144103 FT /rpt_family="AluSp" FT misc_feature 2144332..2144434 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 56.000" FT repeat_region 2144625..2144919 FT /rpt_family="AluSx" FT repeat_region 2144995..2145103 FT /rpt_family="L1MB7" FT repeat_region 2145398..2145592 FT /rpt_family="MER20" FT repeat_region 2146321..2146626 FT /rpt_family="AluSx" FT repeat_region 2146810..2146999 FT /rpt_family="MER20" FT repeat_region 2147062..2147363 FT /rpt_family="AluSp" FT repeat_region complement(2147389..2147431) FT /rpt_family="POLY_A" FT repeat_region 2147444..2147573 FT /rpt_family="AluSg/x" FT repeat_region 2147575..2147607 FT /rpt_family="POLY_A" FT repeat_region 2147614..2147901 FT /rpt_family="AluSc" FT repeat_region 2147902..2148165 FT /rpt_family="AluY" FT repeat_region 2149264..2149559 FT /rpt_family="AluSq" FT repeat_region complement(2150759..2150833) FT /rpt_family="MER5B" FT mRNA complement(<2151237..2151333) FT /product="Human AP-3 complex delta subunit mRNA" FT misc_feature complement(2151238..2151333) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 92.000" FT CDS complement(<2151238..2151333) FT /codon_start=1 FT /product="delta adaptin" FT /note="AP-3 complex delta subunit, partial CDS; Human FT homolog of the bovine leukemia virus receptor; hBLVR" FT /protein_id="AAC25623.1" FT /translation="MALKMVKGSIDRMFDKNLQDLVRGIRNHKEDE" FT repeat_region complement(2151364..2151476) FT /rpt_family="GC_rich" FT repeat_region complement(2152113..2152215) FT /rpt_family="LINE2" FT repeat_region 2152259..2152560 FT /rpt_family="AluSx" FT repeat_region 2152595..2152891 FT /rpt_family="AluSg" FT repeat_region 2152955..2153073 FT /rpt_family="FLAM_C" FT repeat_region 2153095..2153381 FT /rpt_family="AluSq" FT repeat_region 2153393..2153689 FT /rpt_family="AluSx" FT repeat_region complement(2153841..2153928) FT /rpt_family="AluSg/x" FT repeat_region complement(2153946..2154242) FT /rpt_family="AluSx" FT repeat_region complement(2154251..2154272) FT /rpt_family="AT_rich" FT repeat_region complement(2154279..2154571) FT /rpt_family="AluSc" FT repeat_region complement(2154578..2154842) FT /rpt_family="MER21A" FT repeat_region complement(2154854..2154896) FT /rpt_family="MER21B" FT repeat_region 2154897..2155197 FT /rpt_family="AluSq" FT repeat_region 2155328..2155550 FT /rpt_family="AluSg/x" FT repeat_region 2155770..2156071 FT /rpt_family="AluY" FT repeat_region complement(2156305..2156355) FT /rpt_family="(TGGA)n" FT repeat_region complement(2156360..2156536) FT /rpt_family="(TGGA)n" FT repeat_region 2156568..2156866 FT /rpt_family="AluSc" FT repeat_region complement(2156918..2157131) FT /rpt_family="(TGGA)n" FT repeat_region 2157160..2157459 FT /rpt_family="AluYa5" FT repeat_region complement(2157472..2157644) FT /rpt_family="(TGGA)n" FT repeat_region complement(2157667..2157746) FT /rpt_family="(TGGA)n" FT repeat_region complement(2158055..2158354) FT /rpt_family="AluY" FT repeat_region complement(2158357..2158605) FT /rpt_family="AluJ" FT repeat_region complement(2158606..2158734) FT /rpt_family="AluSp/q" FT repeat_region complement(2158752..2158982) FT /rpt_family="LTR8" FT repeat_region complement(2159000..2159215) FT /rpt_family="AluSc" FT repeat_region complement(2159386..2159686) FT /rpt_family="AluY" FT repeat_region complement(2159698..2160014) FT /rpt_family="AluY" FT repeat_region complement(2160016..2160147) FT /rpt_family="AluSg" FT repeat_region 2160245..2160546 FT /rpt_family="AluSx" FT misc_feature complement(2160573..2160670) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 77.000" FT repeat_region complement(2160757..2160963) FT /rpt_family="MER20" FT repeat_region complement(2161158..2161459) FT /rpt_family="AluSq" FT repeat_region complement(2161534..2161662) FT /rpt_family="MER65C" FT repeat_region 2161666..2161964 FT /rpt_family="AluSx" FT repeat_region 2161970..2162022 FT /rpt_family="FLAM_A" FT repeat_region complement(2162033..2162334) FT /rpt_family="AluY" FT repeat_region 2162364..2162670 FT /rpt_family="AluSx" FT repeat_region complement(2162782..2162850) FT /rpt_family="MIR" FT repeat_region 2162914..2163054 FT /rpt_family="LTR8" FT repeat_region 2163055..2163080 FT /rpt_family="AT_rich" FT repeat_region complement(2163081..2163372) FT /rpt_family="AluSx" FT repeat_region complement(2163375..2163490) FT /rpt_family="AluSp" FT repeat_region 2163753..2163867 FT /rpt_family="(CGGG)n" FT repeat_region 2163961..2164064 FT /rpt_family="(CGG)n" FT repeat_region complement(2164071..2164153) FT /rpt_family="(CGGG)n" FT misc_feature 2164157..2164264 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region complement(2164456..2164543) FT /rpt_family="GC_rich" FT repeat_region complement(2165229..2165290) FT /rpt_family="GC_rich" FT repeat_region complement(2165689..2165750) FT /rpt_family="HY1" FT repeat_region complement(2165769..2166068) FT /rpt_family="AluY" FT repeat_region complement(2166096..2166394) FT /rpt_family="AluSp" FT repeat_region complement(2166408..2166709) FT /rpt_family="AluSq" FT repeat_region complement(2166739..2167245) FT /rpt_family="L1MD3" FT misc_feature 2167534..2167701 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 91.000" FT repeat_region complement(2167734..2168031) FT /rpt_family="AluSx" FT repeat_region 2168185..2168317 FT /rpt_family="FLAM_C" FT misc_feature 2168333..2168489 FT /note="BLASTN similarity to T41405 (79..233); match: 0.98, FT score: 8.9e-59; database searched: est; ph1b6_19/1TV Homo FT sapiens cDNA clone ph1b6_19/1TV." FT misc_feature complement(2168334..2168608) FT /note="BLASTN similarity to T41414 (95..372); match: 0.95, FT score: 2.0e-89; database searched: est; ph1g6_19/1TV Homo FT sapiens cDNA clone ph1g6_19/1TV." FT repeat_region complement(2168618..2168912) FT /rpt_family="AluSg" FT misc_feature 2169271..2169500 FT /note="BLASTN similarity to T41412 (1..230); match: 0.95, FT score: 4.1e-82; database searched: est; ph4a9_19/1TV Homo FT sapiens cDNA clone ph4a9_19/1TV." FT repeat_region complement(2169505..2169664) FT /rpt_family="AluSg/x" FT repeat_region 2169819..2169862 FT /rpt_family="L1MD2" FT repeat_region 2169876..2170148 FT /rpt_family="AluSx" FT repeat_region 2170501..2170958 FT /rpt_family="MER21B" FT repeat_region complement(2170960..2171174) FT /rpt_family="AluJb" FT repeat_region 2171409..2171501 FT /rpt_family="MER20" FT repeat_region complement(2172188..2172487) FT /rpt_family="AluY" FT repeat_region complement(2172500..2172799) FT /rpt_family="AluSg" FT repeat_region 2172873..2172990 FT /rpt_family="AluY" FT repeat_region complement(2172992..2173132) FT /rpt_family="L1MB6" FT repeat_region complement(2173359..2173527) FT /rpt_family="MER41D" FT repeat_region complement(2173961..2174120) FT /rpt_family="FRAM" FT repeat_region 2174404..2174601 FT /rpt_family="AluSp" FT repeat_region complement(2174618..2174923) FT /rpt_family="AluJo" FT repeat_region complement(2174954..2175002) FT /rpt_family="(CA)n" FT repeat_region complement(2175004..2175299) FT /rpt_family="AluY" FT repeat_region complement(2175304..2175466) FT /rpt_family="FRAM" FT repeat_region 2175546..2175795 FT /rpt_family="AluSq" FT repeat_region 2175809..2175886 FT /rpt_family="AluSp/q" FT repeat_region 2177126..2177239 FT /rpt_family="MER33" FT repeat_region complement(2177299..2177479) FT /rpt_family="AluSq" FT repeat_region complement(2177536..2177616) FT /rpt_family="AluSg" FT repeat_region complement(2177759..2177923) FT /rpt_family="AluSg/x" FT repeat_region complement(2177926..2178230) FT /rpt_family="AluSx" FT repeat_region 2178282..2178378 FT /rpt_family="AluSq/x" FT repeat_region complement(2178415..2178719) FT /rpt_family="AluY" FT repeat_region complement(2178721..2178858) FT /rpt_family="AluYb8" FT misc_feature 2181184..2181294 FT /note="Overlap with bases 1 to 111 of AC004490" FT repeat_region 2181941..2182246 FT /rpt_family="AluSq" FT repeat_region 2182261..2182546 FT /rpt_family="AluJo" FT repeat_region complement(2183178..2183441) FT /rpt_family="AluSx" FT repeat_region complement(2183630..2183923) FT /rpt_family="AluSg" FT misc_feature 2184577..2184792 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 50.000" FT repeat_region complement(2185073..2185201) FT /rpt_family="AluSg" FT repeat_region 2185500..2185787 FT /rpt_family="AluSx" FT repeat_region 2185788..2185820 FT /rpt_family="(CAAAA)n" FT CDS join(<2185854..2185928,2189731..2189794,2191011..2191239, FT 2193688..2193782,2194514..2194576,2199883..2199938, FT 2202699..2202778,2206728..2206796,2207573..2207679, FT 2208934..2208975,2210345..2210509,2210620..2210854, FT 2211098..2211211,2211750..2211841,2213538..2213660, FT 2213848..2213985,2214470..2214595,2216280..2216528, FT 2217771..>2217921) FT /codon_start=2 FT /product="R29381_1" FT /note="Hypothetical human protein (partial CDS)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC08316.1" FT /translation="WVCEEIPDLKLAMENYVLIDYDTKSFESMQRLCDKYNRAIDSIHQ FT LWKGTTQPMKLNTRPSTGLLRHILQQVYNHSVTDPEKLNNYEPFSPEVYGETSFDLVAQ FT MIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKW FT MKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGG FT RIVSSKPFAPLNFRINSRNLSDIGTIMRVVELSPLKGSVSWTGKPVSYYLHTIDRTILE FT NYFSSLKNPKLREGRGQRWGFLWLNLLSFQEEQEAARRRQQRESKSNAATPTKGPEGKV FT AGPADAPMDSGAEEEKAGAATVKKPSPSKARKKKLNKKGRKMAGRKRGRPKKMNTANPE FT RKPKKNQTALDALHAQTVSQTAASSPQDAYRSPHSPFYQLPPSVQRHSPNPLLVAPTPP FT ALQKLLESFKIQYLQFLAYTKTPQYKASLQELLGQEKEKNAQLLGAAQQLLSHCQAQKE FT EIRRLFQQKLDEVVDPRGQLGVKALTYNDLIQAQKEISAHNQQLREQSEQLEQDNRALR FT GQSLQLLKARCEELQLDWATLSLEKLLKEKQALKSQISEKQRHCLELQISIVELEKSQR FT QQELLQLKSCVPPDDALSLHLRGKGALGRELEPDASRLHLELDCTKFSLPHLSSMSPEL FT SMNGQAAGYELCGGLRERAYGSSGELITSLPISIPLSTVQPNKLPVSIPLASVVLPSRA FT ERAV" FT misc_feature 2185854..2185928 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 66.000~~DDS similarity to FT overlapping ESTs:~W45255 zc24d10.r1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 323251 5'; FT (111..185); 98% identity.~~AA262760 zs24d01.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:686113 3'; FT (139..213); 100% identity.~~AA626659 ad09d06.r1 Soares FT NbHFB Homo sapiens cDNA clone 877739 5' similar to FT WP:F55G7.2 CE03424 ; (21..96); 98% identity." FT repeat_region 2186991..2187059 FT /rpt_family="MER21B" FT repeat_region 2187640..2187937 FT /rpt_family="AluY" FT misc_feature 2188196..2188278 FT /note="DDS similarity to W45255 zc24d10.r1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 323251 5'; FT (186..269); 100% identity." FT repeat_region 2188473..2188499 FT /rpt_family="GC_rich" FT misc_feature 2189731..2189794 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA262760 zs24d01.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:686113 3'; FT (214..277); 100% identity.~~AA626659 ad09d06.r1 Soares FT NbHFB Homo sapiens cDNA clone 877739 5' similar to FT WP:F55G7.2 CE03424 ; (97..160); 98% identity." FT misc_feature 2191011..2191239 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to:~(9828..10056) AA626659 ad09d06.r1 Soares FT NbHFB Homo sapiens cDNA clone 877739 5' similar to FT WP:F55G7.2 CE03424 ; (161..389); 99% FT identity.~~(9828..10056) AA262840 zs24d01.r1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:686113 5' similar to FT WP:F55G7.2 CE03424 ; (392..165); 99% FT identity.~~(9828..10033) AA262760 zs24d01.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:686113 3'; (278..482); 99% FT identity." FT repeat_region 2192211..2192326 FT /rpt_family="FLAM_C" FT repeat_region complement(2192328..2192363) FT /rpt_family="AT_rich" FT repeat_region 2192387..2192691 FT /rpt_family="AluSx" FT repeat_region 2192703..2192869 FT /rpt_family="AluJb" FT misc_feature 2193688..2193782 FT /note="DDS similarity to overlapping ESTs:~AA626659 FT ad09d06.r1 Soares NbHFB Homo sapiens cDNA clone 877739 5' FT similar to WP:F55G7.2 CE03424 ; (390..484); 97% FT identity.~~~AA262840 zs24d01.r1 NCI_CGAP_GCB1 Homo sapiens FT cDNA clone IMAGE:686113 5' similar to WP:F55G7.2 CE03424 FT ;~(164..70); 100% identity.~~(12541..12599) W08892 FT ma03b09.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone FT 303449 5'; (281..223); 88% identity.~~(12548..12599) FT AA279545 zs86b05.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:704337 5' similar to WP:F55G7.2 CE03424 ; (425..374); FT 100% identity.~~(12505..12621) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 100.000" FT repeat_region complement(2194168..2194468) FT /rpt_family="AluY" FT misc_feature 2194514..2194576 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 73.000~~DDS similarity to FT overlapping ESTs:~AA626659 ad09d06.r1 Soares NbHFB Homo FT sapiens cDNA clone 877739 5' similar to WP:F55G7.2 CE03424 FT ; (485..547); 97% identity.~~(13331..13399) AA262840 FT zs24d01.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:686113 5' similar to WP:F55G7.2 CE03424 ; 969..1); FT 100% identity.~~(13331..13393) W08892 ma03b09.r1 Soares FT mouse p3NMF19.5 Mus musculus cDNA clone 303449 5'; FT (222..160); 98% identity.~~(13331..13393) AA279545 FT zs86b05.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:704337 5' similar to WP:F55G7.2 CE03424 ; (373..311); FT 100% identity.~" FT misc_feature 2194721..2194829 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 53.000" FT repeat_region 2196299..2196325 FT /rpt_family="Alu" FT repeat_region complement(2196332..2196629) FT /rpt_family="AluSg" FT repeat_region complement(2196630..2196861) FT /rpt_family="L1" FT repeat_region complement(2198726..2199069) FT /rpt_family="L1MB7" FT misc_feature 2199883..2199938 FT /note="DDS similarity to overlapping ESTs:~W08892 FT ma03b09.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone FT 303449 5'; (159..104); 84% identity.~~AA279545 zs86b05.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:704337 5' FT similar to WP:F55G7.2 CE03424 ; (310..255); 100% identity." FT repeat_region complement(2200908..2201026) FT /rpt_family="(CGA)n" FT repeat_region complement(2201034..2201152) FT /rpt_family="(CGA)n" FT misc_feature 2202699..2202778 FT /note="DDS similarity to overlapping ESTs:~W08892 FT ma03b09.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone FT 303449 5'; (103..24); 96% identity.~~AA279545 zs86b05.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:704337 5' FT similar to WP:F55G7.2 CE03424 ; (254..175); 100% FT identity.~~(21538..21595) AA110630 mp52a04.r1 Soares 2NbMT FT Mus musculus cDNA clone 572814 5'; (1..58); 97% identity." FT repeat_region complement(2202922..2203098) FT /rpt_family="AluSg/x" FT repeat_region complement(2203100..2203400) FT /rpt_family="AluSx" FT repeat_region complement(2204082..2204184) FT /rpt_family="(CA)n" FT repeat_region complement(2204185..2204312) FT /rpt_family="(CATG)n" FT repeat_region complement(2204313..2204375) FT /rpt_family="(CA)n" FT repeat_region complement(2204968..2205268) FT /rpt_family="AluY" FT repeat_region complement(2205441..2205500) FT /rpt_family="AluSg/x" FT repeat_region complement(2205691..2205987) FT /rpt_family="AluJo" FT repeat_region complement(2205999..2206284) FT /rpt_family="AluSg" FT repeat_region 2206314..2206540 FT /rpt_family="AluSx" FT misc_feature 2206728..2206796 FT /note="DDS similarity to overlapping ESTs:~AA279545 FT zs86b05.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:704337 5' similar to WP:F55G7.2 CE03424; (174..106); FT 100% identity.~~AA110630 mp52a04.r1 Soares 2NbMT Mus FT musculus cDNA clone 572814 5'; (59..127); 87% identity." FT repeat_region complement(2206865..2207063) FT /rpt_family="MER20" FT misc_feature 2207573..2207679 FT /note="DDS similarity to overlapping ESTs:~AA279545 FT zs86b05.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:704337 5' similar to WP:F55G7.2 CE03424; (105..4); FT 98% identity.~~AA110630 mp52a04.r1 Soares 2NbMT Mus FT musculus cDNA clone 572814 5'; (128..233); 90% FT identity.~~(26390..26553) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 98.000" FT misc_feature 2208934..2208975 FT /note="DDS similarity to AA110630 mp52a04.r1 Soares 2NbMT FT Mus musculus cDNA clone 572814 5'; (234..275); 98% FT identity." FT repeat_region complement(2209112..2209201) FT /rpt_family="(GGAA)n" FT repeat_region complement(2209183..2209303) FT /rpt_family="(GA)n" FT misc_feature 2210345..2210509 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 85.000~~DDS similarity FT to AA110630 mp52a04.r1 Soares 2NbMT Mus musculus cDNA clone FT 572814 5'; (276..384); 74% identity." FT misc_feature 2210620..2210854 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 98.000~~DDS similarity FT to:~(29437..29512) AA110630 mp52a04.r1 Soares 2NbMT Mus FT musculus cDNA clone 572814 5'; (385..460); 82% FT identity.~~(29540..29671) AA013802 mh04d08.r1 Soares mouse FT placenta 4NbMP13.5 14.5 Mus musculus cDNA clone 441519 5'; FT (1..129); 70% identity." FT misc_feature 2211098..2211211 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 91.000~~DDS similarity FT to AA013802 mh04d08.r1 Soares mouse placenta 4NbMP13.5 14.5 FT Mus musculus cDNA clone 441519 5'; (130..243); 86% FT identity." FT repeat_region 2211411..2211533 FT /rpt_family="MER20" FT misc_feature 2211750..2211841 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to:~(30567..30658) AA013802 mh04d08.r1 Soares FT mouse placenta 4NbMP13.5 14.5 Mus musculus cDNA clone FT 441519 5'; (244..335); 88% identity." FT repeat_region complement(2212206..2212458) FT /rpt_family="AluY" FT misc_feature 2213538..2213667 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 93.000" FT misc_feature 2213848..2214042 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature 2214470..2214595 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 2214938..2215125 FT /rpt_family="AluSx" FT repeat_region 2215162..2215274 FT /rpt_family="AluJb" FT misc_feature 2215993..2216197 FT /note="DDS similarity to AA584872 no13f09.s1 NCI_CGAP_Phe1 FT Homo sapiens cDNA clone IMAGE:1100585; Score: 410 Identity: FT 205/205 (100%)." FT misc_feature 2216280..2216526 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 85.000" FT misc_feature 2216615..2216764 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 66.000" FT misc_feature 2216991..2217089 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 51.000" FT misc_feature 2217771..2217917 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(2218393..2218691) FT /rpt_family="AluY" FT repeat_region complement(2218694..2218863) FT /rpt_family="AluY" FT repeat_region complement(2218880..2219170) FT /rpt_family="AluSx" FT repeat_region complement(2219171..2219306) FT /rpt_family="AluSq/x" FT repeat_region complement(2219326..2219415) FT /rpt_family="L1MB6" FT repeat_region complement(2219462..2219638) FT /rpt_family="L1MB6" FT misc_feature 2220107..2220185 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 52.000" FT repeat_region 2220735..2220835 FT /rpt_family="MER58A" FT repeat_region 2220893..2221196 FT /rpt_family="AluSq" FT misc_feature 2221975..2222558 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 65.000" FT repeat_region 2222618..2222901 FT /rpt_family="AluY" FT misc_feature 2223280..2223478 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 93.000" FT repeat_region complement(2223820..2224128) FT /rpt_family="L1MB7" FT repeat_region complement(2224316..2224457) FT /rpt_family="L1MB6" FT repeat_region complement(2224463..2224746) FT /rpt_family="AluSx" FT misc_feature 2225387..2225451 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 72.000" FT misc_feature 2225510..2225710 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 64.000" FT misc_feature 2226182..2226499 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 82.000" FT repeat_region complement(2226839..2226885) FT /rpt_family="GC_rich" FT misc_feature 2226875..2227126 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 75.000~~DDS similarity FT to AA630322 ac08g04.s1 Stratagene HeLa cell s3 937216 Homo FT sapiens cDNA clone 855894 3'; (371..118) 96% identity." FT repeat_region complement(2227134..2227180) FT /rpt_family="GC_rich" FT repeat_region complement(2227513..2227581) FT /rpt_family="GC_rich" FT repeat_region complement(2227900..2228024) FT /rpt_family="(GGA)n" FT misc_feature 2228199..2228381 FT /note="DDS similarity to overlapping ESTs: ~(9091..9273) FT AA621291 zu83f03.s1 Soares testis NHT Homo sapiens cDNA FT clone 744605 3'; (414..232) 98% identity.~(9123..9273) FT AA770189 ah72f05.s1 Soares testis NHT Homo sapiens cDNA FT clone 1321185 3'; (381..232) 97% identity.~(9150..9273) FT AA398687 zt70f02.s1 Soares testis NHT Homo sapiens cDNA FT clone 727707 3'; (356..233) 97% identity.~(9200..9273) FT AA757102 ah55f10.s1 Soares testis NHT Homo sapiens cDNA FT clone 1309579 3'; (307..234) 100% identity.~~Additional EST FT matches:~AI026903, AA991559" FT misc_feature 2229784..2230336 FT /note="DDS similarity to overlapping ESTs: ~(10676..10795) FT AA630322 ac08g04.s1 Stratagene HeLa cell s3 937216 Homo FT sapiens cDNA clone 855894 3'; (117..1) 97% FT identity.~(10676..10909) AA621291 zu83f03.s1 Soares testis FT NHT Homo sapiens cDNA clone 744605 3'; (231..1) 98% FT identity.~(10676..10909) AA770189 ah72f05.s1 Soares testis FT NHT Homo sapiens cDNA clone 1321185 3'; (231..1) 98% FT identity.~(10676..10909) AA398687 zt70f02.s1 Soares testis FT NHT Homo sapiens cDNA clone 727707 3'; (232..1) 99% FT identity.~(10676..10910) AA757102 ah55f10.s1 Soares testis FT NHT Homo sapiens cDNA clone 1309579 3'; (233..1) 96% FT identity.~(10724..11228) N80330 yz91f07.r1 Homo sapiens FT cDNA clone 290437 5'; Score: 876 Identity: 479/505 FT (94%).~~Additional EST matches:~AI026903, AA991559" FT misc_feature complement(2230424..2230692) FT /note="DDS similarity to AA456025 aa03b07.s1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 812149 3';Score: 489 Identity: FT 262/266 (98%)." FT misc_feature 2230774..2231783 FT /note="DDS similarity to overlapping ESTs: ~(11666..12008) FT dbj|D81901|HUM420D08B Human fetal brain cDNA 5'-end FT GEN-420D08; Score: 673 Identity: 341/342 FT (99%).~(11873..12290) AA112521 zm28e02.r1 Stratagene FT pancreas (#937208) Homo sapiens cDNA clone 526970 5'; FT Score: 741 Identity: 404/421 (95%).~(12110..12518) R90929 FT yn01h09.r1 Homo sapiens cDNA clone 167201 5'; Score: 659 FT Identity: 383/416 (92%).~(12349..12675) AA310116|AA310116 FT EST180954 Jurkat T-cells V Homo sapiens cDNA 5' end; Score: FT 622 Identity: 319/327 (97%)." FT misc_feature 2231937..2232577 FT /note="DDS similarity to overlapping ESTs: ~(12829..13226) FT H12870 yj14d09.r1 Homo sapiens cDNA clone 148721 5'; Score: FT 721 Identity: 386/401 (96%).~(12987..13099) AA382606 FT EST95832 Testis I Homo sapiens cDNA 5' end; Score: 190 FT Identity: 104/113 (92%).~(13446..12972) R90930 yn01h09.s1 FT Homo sapiens cDNA clone 167201 3'; Score: 823 Identity: FT 453/478 (94%).~(13468..13068) AA113300 zm28e02.s1 FT Stratagene pancreas (#937208) Homo sapiens cDNA clone FT 526970 3'; Score: 768 Identity: 395/399 FT (98%).~(13468..13095) R89035 ym98f12.s1 Homo sapiens cDNA FT clone 166991 3'; Score: 684 Identity: 364/374 FT (97%).~(13469..13094) R40647 yf78f09.s1 Homo sapiens cDNA FT clone 28420 3'; Score: 711 Identity: 372/383 FT (97%).~(13469..13022) R45214 yg41c07.s1 Homo sapiens cDNA FT clone 35285 3'; Score: 717 Identity: 430/471 (91%)." FT misc_feature 2233149..2233917 FT /note="DDS similarity to overlapping ESTs: ~(14042..14513) FT AA863246 og92e12.s1 NCI_CGAP_Kid5 Homo sapiens cDNA clone FT IMAGE:1455790 3' similar to contains Alu repetitive FT element; contains element MER1 repetitive element; Score: FT 901 Identity: 465/469 (99%).~(14041..14560) AA779798 FT af45a09.s1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 1034584 3' similar to contains Alu repetitive FT element; contains element PTR5 repetitive element; Score: FT 959 Identity: 507/513 (98%).~(14045..14469) AA635977 FT nr35a04.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1169934; Score: 793 Identity: 417/420 FT (99%).~(14512..14254) AA602930 np02g04.s1 NCI_CGAP_Pr2 Homo FT sapiens cDNA clone IMAGE:1115190 similar to contains Alu FT repetitive element; (1..264) 96% identity.~(14218..14044) FT AA602930 np02g04.s1 NCI_CGAP_Pr2 Homo sapiens cDNA clone FT IMAGE:1115190 similar to contains Alu repetitive element; FT (265..493) 99% identity.~(14047..14556) AA704822 zj45a02.s1 FT Soares fetal liver spleen 1NFLS S1 Homo sapiens cDNA clone FT 453194 3' similar to gb:J04809_rna1 ADENYLATE KINASE FT ISOENZYME 1 (HUMAN); Score: 963 Identity: 503/509 FT (98%).~(14809..14370) AA448766 zx10e10.r1 Soares total FT fetus Nb2HF8 9w Homo sapiens cDNA clone 786090 5' similar FT to contains Alu repetitive element; contains element TAR1 FT repetitive element ; Score: 825 Identity: 430/437 FT (98%).~and others." FT repeat_region 2233569..2233756 FT /rpt_family="AluJo" FT misc_feature complement(2233997..2234060) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to AA247474 csg2939.seq.F Human fetal heart, FT Lambda ZAP Express Homo sapiens cDNA 5'; (301..364) 100% FT identity." FT misc_feature complement(2234149..2234239) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 64.000~~DDS similarity to FT AA247474 csg2939.seq.F Human fetal heart, Lambda ZAP FT Express Homo sapiens cDNA 5'; (210..300) 100% identity." FT repeat_region 2234323..2234405 FT /rpt_family="MLT1B" FT repeat_region 2234429..2234715 FT /rpt_family="AluJo" FT repeat_region 2234717..2235017 FT /rpt_family="AluSx" FT repeat_region 2235018..2235318 FT /rpt_family="MLT1B" FT misc_feature complement(2235761..2235827) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 93.000~~DDS similarity FT to AA247474 csg2939.seq.F Human fetal heart, Lambda ZAP FT Express Homo sapiens cDNA 5'; (143..209) 100% identity." FT repeat_region complement(2235840..2235918) FT /rpt_family="GC_rich" FT misc_feature complement(2235922..2235989) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 94.000~~DDS similarity FT to AA247474 csg2939.seq.F Human fetal heart, Lambda ZAP FT Express Homo sapiens cDNA 5'; (75..142) 100% identity." FT repeat_region complement(2236027..2236119) FT /rpt_family="(CGGG)n" FT misc_feature complement(2236154..2236305) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 89.000~~(17119..17046) FT DDS similarity to AA247474 csg2939.seq.F Human fetal heart, FT Lambda ZAP Express Homo sapiens cDNA 5'; (1..74) 100% FT identity." FT repeat_region complement(2236268..2236319) FT /rpt_family="GC_rich" FT misc_feature 2236490..2236788 FT /note="BLASTN similarity to Z58306 (1..299); match: 0.97, FT score: 2.4e-111; database searched: nt; H.sapiens CpG DNA, FT clone 34h8, reverse read cpg34h8.rt1a ." FT repeat_region 2237135..2237428 FT /rpt_family="AluJo" FT repeat_region 2237429..2237601 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(2238022..2238319) FT /rpt_family="AluJb" FT repeat_region complement(2238320..2238390) FT /rpt_family="AluSq/x" FT misc_feature complement(2238407..2238508) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 80.000" FT repeat_region 2239082..2239374 FT /rpt_family="AluSx" FT repeat_region complement(2239600..2239709) FT /rpt_family="(CAAAA)n" FT repeat_region complement(2242309..2242598) FT /rpt_family="MLT1D" FT mRNA 2243418..2248683 FT /gene="SAP62" FT /product="Human spliceosomal protein (SAP 62) mRNA" FT gene 2243418..2248683 FT /gene="SAP62" FT /note="Human spliceosomal protein (SAP 62) gene" FT CDS join(2243418..2243543,2244543..2244614,2244732..2244778, FT 2245445..2245554,2246752..2246801,2246881..2247021, FT 2247593..2247661,2247766..2248545) FT /codon_start=1 FT /gene="SAP62" FT /product="SP62_HUMAN" FT /note="SPLICEOSOME ASSOCIATED PROTEIN 62; SAP 62; SF3A66" FT /protein_id="AAC25613.1" FT /translation="MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPY FT FMKNHLGSYECKLCLTLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKV FT EVKKFVKIGRPGYKVTKQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPD FT RRWQYLLMAAEPYETIAFKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKPPAPPS FT LPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLP FT PPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPA FT PGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPG FT MHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIP FT PPPPTN" FT repeat_region 2244941..2245203 FT /rpt_family="AluSx" FT misc_feature 2246738..2246801 FT /gene="SAP62" FT /note="DDS similarity to overlapping ESTs: ~(27630..27693) FT H27211 yl15h09.r1 Homo sapiens cDNA clone 158369 5'; FT (1..63) 84% identity.~(27652..27693) HSU46230 Human clone FT xs196 mRNA sequence; (1..42) 100% identity." FT misc_feature 2246881..2247021 FT /gene="SAP62" FT /note="DDS similarity to overlapping ESTs: ~(27773..27913) FT H27211 yl15h09.r1 Homo sapiens cDNA clone 158369 5'; FT (64..203) 98% identity.~(27773..27913) HSU46230 Human clone FT xs196 mRNA sequence; (43..183) 94% identity." FT misc_feature 2247593..2247661 FT /gene="SAP62" FT /note="DDS similarity to overlapping ESTs: ~(28485..28553) FT H27211 yl15h09.r1 Homo sapiens cDNA clone 158369 5'; FT (204..272) 100% identity.~(28485..28553) HSU46230 Human FT clone xs196 mRNA sequence; (184..253) 94% identity." FT misc_feature 2247766..2247836 FT /gene="SAP62" FT /note="DDS similarity to overlapping ESTs: ~(28658..28728) FT H27211 yl15h09.r1 Homo sapiens cDNA clone 158369 5'; FT (273..343) 96% identity.~(28658..28683) HSU46230 Human FT clone xs196 mRNA sequence; (254..280) 96% identity." FT misc_feature 2248448..2248683 FT /gene="SAP62" FT /note="DDS similarity to overlapping ESTs: ~(29340..29541) FT T28416 EST43278 Homo sapiens cDNA 5' end similar to FT spliceosomal protein SAP 62 (HT:3194).~Score: 375 Identity: FT 196/201 (97%).~(29411..29575) AA283841 zt19h03.r1 Soares FT ovary tumor NbHOT Homo sapiens cDNA clone 713621 5'; Score: FT 293 Identity: 161/180 (89%)." FT misc_feature complement(2248511..2248889) FT /note="DDS similarity to overlapping ESTs: ~(29781..29403) FT AA588012 nm92f07.s1 NCI_CGAP_Co9 Homo sapiens cDNA clone FT IMAGE:1075717 similar to gb:A18521_cds1 MUELLERIAN FT INHIBITING FACTOR ~PRECURSOR (HUMAN); (127..509) 95% FT identity." FT mRNA 2249122..2252071 FT /product="Human Mullerian inhibiting substance mRNA" FT gene 2249332..2251956 FT /gene="MIS" FT /note="HUMAN MUELLERIAN INHIBITING FACTOR PRECURSOR" FT CDS join(2249332..2249743,2250336..2250478,2250651..2250759, FT 2250848..2251007,2251098..2251956) FT /codon_start=1 FT /gene="MIS" FT /product="MIS_HUMAN" FT /note="MUELLERIAN INHIBITING FACTOR PRECURSOR; FT ANTI-MUELLERIAN HORMONE; AMH; MULLERIAN INHIBITING FT SUBSTANCE" FT /protein_id="AAC25614.1" FT /translation="MRDLPLTSLALVLSALGALLGTEALRAEEPAVGTSGLIFREDLDW FT PPGSPQEPLCLVALGGDSNGSSSPLRVVGALSAYEQAFLGAVQRARWGPRDLATFGVCN FT TGDRQAALPSLRRLGAWLRDPGGQRLVVLHLEEVTWEPTPSLRFQEPPPGGAGPPELAL FT LVLYPGPGPEVTVTRAGLPGAQSLCPSRDTRYLVLAVDRPAGAWRGSGLALTLQPRGED FT SRLSTARLQALLFGDDHRCFTRMTPALLLLPRSEPAPLPAHGQLDTVPFPPPRPSAELE FT ESPPSADPFLETLTRLVRALRVPPARASAPRLALDPDALAGFPQGLVNLSDPAALERLL FT DGEEPLLLLLRPTAATTGDPAPLHDPTSAPWATALARRVAAELQAAAAELRSLPGLPPA FT TAPLLARLLALCPGGPGGLGDPLRALLLLKALQGLRVEWRGRDPRGPGRAQRSAGATAA FT DGPCALRELSVDLRAERSVLIPETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQVRG FT AALARPPCCVPTAYAGKLLISLSEERISAHHVPNMVATECGCR" FT repeat_region complement(2251167..2251216) FT /rpt_family="GC_rich" FT repeat_region 2251586..2251669 FT /rpt_family="GC_rich" FT misc_feature 2251638..2251886 FT /gene="MIS" FT /note="DDS similarity to AA316792 EST188459 HCC cell line FT (matastasis to liver in mouse) II Homo sapiens cDNA 5' end FT similar to Muellerian inhibiting substance; Score: 453 FT Identity: 239/248 (96%)" FT misc_feature complement(2251974..2252229) FT /note="DDS similarity to overlapping ESTs: ~(32963..32866) FT AA588012 nm92f07.s1 NCI_CGAP_Co9 Homo sapiens cDNA clone FT IMAGE:1075717 similar to gb:A18521_cds1 MUELLERIAN FT INHIBITING FACTOR ~PRECURSOR (HUMAN); (29..126) 100% FT identity.~(33121..32920) AA588895 no23b12.s1 NCI_CGAP_Pr22 FT Homo sapiens cDNA clone IMAGE:1101503; Score: 404 Identity: FT 202/202 (100%).~" FT misc_feature 2252273..2252735 FT /note="DDS similarity to overlapping ESTs: ~(33165..33627) FT AA628755 af41h08.s1 Soares total fetus Nb2HF8 9w Homo FT sapiens cDNA clone 1034271 3'; Score: 901 Identity: FT 458/462 (99%).~(33172..33467) AA523549 ng30f08.s1 FT NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:936327; Score: FT 545 Identity: 288/293 (98%)." FT misc_feature complement(2252911..2253062) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 52.000" FT misc_feature complement(2253619..2253792) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 99.000" FT repeat_region 2253722..2253753 FT /rpt_family="(CGG)n" FT misc_feature complement(2254444..2254481) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 66.000" FT repeat_region 2254610..2254845 FT /rpt_family="AluJb" FT misc_feature 2265560..2276074 FT /note="BLASTN similarity to D89870 (1..10524); match: 0.99, FT score: 2.1e-209; database searched: nt; Homo sapiens DNA FT for antizyme, complete cds" FT repeat_region 2265760..2266053 FT /rpt_family="AluSx" FT repeat_region 2266056..2266341 FT /rpt_family="AluSg" FT repeat_region 2266868..2267012 FT /rpt_family="MER20" FT repeat_region 2267012..2267071 FT /rpt_family="AluSc" FT repeat_region complement(2267280..2267573) FT /rpt_family="AluSg" FT repeat_region complement(2267673..2267804) FT /rpt_family="AluSc" FT repeat_region 2267869..2268016 FT /rpt_family="MER20" FT repeat_region 2268126..2268422 FT /rpt_family="AluSx" FT repeat_region complement(2268475..2268515) FT /rpt_family="AT_rich" FT repeat_region complement(2269231..2269292) FT /rpt_family="GC_rich" FT repeat_region complement(2269414..2269484) FT /rpt_family="GC_rich" FT misc_feature 2269544..2269743 FT /note="DDS similarity to overlapping ESTs: AA317001 FT EST188650 HCC cell line (metastasis to liver in mouse) II FT Homo sapiens cDNA 5' end similar to similar to ornithine FT decarboxylase antizyme (1..200); 100% identity.~AA308557 FT EST179376 HCC cell line (matastasis to liver in mouse) II FT Homo sapiens cDNA 5' end similar to similar to ornithine FT decarboxylase antizyme (1..200); 100% FT identity.~(14748..14942) AA307682 EST178550 Colon carcinoma FT (HCC) cell line Homo sapiens cDNA 5' end similar to similar FT to ornithine decarboxylase antizyme (1..195); 100% FT identity.~(14758..14942) L49059|HUM010907F Homo sapiens FT retinal fovea EST HFD010907 sequence.(221..37); 100% FT identity.~Other EST matches: T53070, T47553, T27358, FT T19460" FT CDS join(2269598..2269743,2271384..>2271441) FT /codon_start=1 FT /gene="OAZ" FT /product="ODC antizyme ORF1" FT /note="translation of first 68 residues of ODC antizyme; FT Ornithine decarboxylase antizyme is likely expressed FT through translational frameshifting which results in the FT products of ORF1 and ORF2 being synthesized as a single FT polypeptide. In rat (D10706) the mRNA sequence at the FT junction of the two ORFs, UCC UGA U (253..259, shown as FT ORF1 codons), is decoded as Ser-Asp through +1 FT frameshifting" FT /protein_id="AAC02802.1" FT /translation="MVKSSLQRILNSHCFAREKEGDKPSATIHASRTMPLLSLHSRGGS FT SSESSRVSLHCCSNPGPGPRWCS" FT repeat_region 2269778..2269820 FT /rpt_family="GC_rich" FT repeat_region complement(2270869..2270933) FT /rpt_family="GC_rich" FT misc_feature 2271384..2271529 FT /gene="OAZ" FT /note="DDS similarity to overlapping ESTs: AA317001 FT EST188650 HCC cell line (metastasis to liver in mouse) II FT Homo sapiens cDNA 5' end similar to similar to ornithine FT decarboxylase antizyme (201..346); 99% identity.~AA308557 FT EST179376 HCC cell line (matastasis to liver in mouse) II FT Homo sapiens cDNA 5' end similar to similar to ornithine FT decarboxylase antizyme (201..346); 100% identity.~AA307682 FT EST178550 Colon carcinoma (HCC) cell line Homo sapiens cDNA FT 5' end similar to similar to ornithine decarboxylase FT antizyme (196..341); 100% identity.~(16583..16618) FT L49059|HUM010907F Homo sapiens retinal fovea EST HFD010907 FT sequence.(36..1); 100% identity.~(16642..16728) AA642516 FT nq72e01.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1157880 similar to TR:E183625 E183625 ORNITHINE FT DECARBOXYLASE ANTIZYME ; (613..527); 91% identity.~Other FT EST matches: T27358, T53070, T47553, T36254" FT CDS join(<2271443..2271529,2271781..2271953,2272734..2272819, FT 2272971..2273107) FT /codon_start=1 FT /gene="OAZ" FT /product="ODC antizyme-ORF2" FT /note="remainder of protein past +1 translational FT frameshift in ODC antizyme" FT /protein_id="AAC02803.1" FT /translation="DAPHPPLKIPGGRGNSQRDHNLSANLFYSDDRLNVTEELTSNDKT FT RILNVQSRLTDAKRINWRTVLSGGSLYIEIPGGALPEGSKDSFAVLLEFAEEQLRADHV FT FICFHKNREDRAALLRTFSFLGFEIVRPGHPLVPKRPDACFMAYTFERESSGEEEE" FT misc_feature 2271781..2271953 FT /gene="OAZ" FT /note="DDS similarity to overlapping ESTs: (16980..17105) FT AA317001 EST188650 HCC cell line (metastasis to liver in FT mouse) II Homo sapiens cDNA 5' end similar to similar to FT ornithine decarboxylase antizyme (347..471); 99% FT identity.~(16980..17152) AA308557 EST179376 HCC cell line FT (matastasis to liver in mouse) II Homo sapiens cDNA 5' end FT similar to similar to ornithine decarboxylase antizyme FT (347..519); 99% identity.~(16980..17152) AA307682 EST178550 FT Colon carcinoma (HCC) cell line Homo sapiens cDNA 5' end FT similar to similar to ornithine decarboxylase antizyme FT (342..514); 97% identity.~(16980..17152) AA642516 FT nq72e01.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1157880 similar to TR:E183625 E183625 ORNITHINE FT DECARBOXYLASE ANTIZYME ; (526..355); 99% identity.~Other FT EST matches: T19460, T27358, T35381, T35388, T36254, FT T35475, T35239, T34697, T31540" FT repeat_region complement(2272164..2272459) FT /rpt_family="AluSq" FT misc_feature 2272477..2272625 FT /note="BLASTN similarity to Sanger CpG clone cpg217f10.ft1a FT (5..153); match: 0.98, score: 1.5e-53; database searched: FT Sanger CpG; bases 88 to 240 (SL to QR)" FT misc_feature 2272734..2272819 FT /gene="OAZ" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 91.000~DDS similarity FT to overlapping ESTs: (17933..17968) AA307682 EST178550 FT Colon carcinoma (HCC) cell line Homo sapiens cDNA 5' end FT similar to similar to ornithine decarboxylase antizyme FT (515..550); 94% identity.~(17933..18018) AA642516 FT nq72e01.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1157880 similar to TR:E183625 E183625 ORNITHINE FT DECARBOXYLASE ANTIZYME ; (354..269); 100% FT identity.~(17930..18018) AA632136 np74e09.s1 NCI_CGAP_Br2 FT Homo sapiens cDNA clone IMAGE:1132072 similar to TR:E183625 FT E183625 ORNITHINE DECARBOXYLASE ANTIZYME ; (626..537); 99% FT identity." FT misc_feature 2272971..2273487 FT /note="DDS similarity to overlapping ESTs: (18170..18437) FT AA642516 nq72e01.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1157880 similar to TR:E183625 E183625 ORNITHINE FT DECARBOXYLASE ANTIZYME ; (268..1); 99% FT identity.~(18170..18439) AA643013 nr95d09.s1 NCI_CGAP_Pr25 FT Homo sapiens cDNA clone IMAGE:1175729 similar to TR:E183625 FT E183625 ORNITHINE DECARBOXYLASE ANTIZYME ; (280..12); 98% FT identity.~(18170..18686) AA642516 nq72e01.s1 NCI_CGAP_Pr22 FT Homo sapiens cDNA clone IMAGE:1157880 similar to TR:E183625 FT E183625 ORNITHINE DECARBOXYLASE ANTIZYME ; (536..20); 99% FT identity.~(18170..18302) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: good, score: FT 71.000" FT misc_feature complement(2273133..2273265) FT /note="BLASTN similarity to Sanger CpG clone cpg217f10.ft1a FT (1..133); match: 0.96, score: 1.2e-71; database searched: FT Sanger CpG; bases 108 to 430 (SL to QR)." FT repeat_region 2273296..2273334 FT /rpt_family="AT_rich" FT repeat_region complement(2274282..2274390) FT /rpt_family="LINE2" FT repeat_region complement(2274515..2274595) FT /rpt_family="LINE2" FT repeat_region 2274691..2274926 FT /rpt_family="AluY" FT repeat_region 2274931..2274962 FT /rpt_family="POLY_A" FT repeat_region complement(2274981..2275092) FT /rpt_family="LINE2" FT misc_feature complement(2275409..2276353) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 81.000" FT repeat_region 2275872..2275949 FT /rpt_family="GC_rich" FT repeat_region 2276742..2277030 FT /rpt_family="AluSx" FT repeat_region 2277179..2277533 FT /rpt_family="MSTA" FT repeat_region complement(2277557..2277857) FT /rpt_family="AluSg" FT repeat_region complement(2277867..2278161) FT /rpt_family="AluY" FT repeat_region complement(2278162..2278458) FT /rpt_family="AluSx" FT misc_feature complement(2278313..2278415) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 79.000" FT repeat_region 2278463..2278497 FT /rpt_family="MSTA" FT misc_feature complement(2278722..2278842) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 70.000" FT repeat_region 2279163..2279220 FT /rpt_family="MIR" FT repeat_region 2279221..2279372 FT /rpt_family="AluJb" FT repeat_region 2279374..2279641 FT /rpt_family="AluY" FT repeat_region complement(2279752..2280052) FT /rpt_family="AluSx" FT repeat_region complement(2280060..2280372) FT /rpt_family="AluSx" FT repeat_region complement(2280409..2280648) FT /rpt_family="AluJo" FT misc_feature complement(2280579..2280664) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 64.000" FT repeat_region 2282666..2282728 FT /rpt_family="MIR" FT repeat_region complement(2282971..2283127) FT /rpt_family="FRAM" FT repeat_region complement(2283382..2283547) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(2283549..2283857) FT /rpt_family="AluSx" FT repeat_region 2283887..2284174 FT /rpt_family="AluJo" FT repeat_region complement(2284272..2284315) FT /rpt_family="MER58A" FT repeat_region 2284396..2284704 FT /rpt_family="AluSx" FT repeat_region 2284705..2284986 FT /rpt_family="AluSq" FT repeat_region complement(2285191..2285482) FT /rpt_family="AluSx" FT repeat_region complement(2285492..2285595) FT /rpt_family="MIR" FT repeat_region 2286577..2286605 FT /rpt_family="MIR" FT repeat_region 2286891..2287044 FT /rpt_family="MIR" FT misc_feature complement(2287221..2287321) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 59.000" FT repeat_region complement(2287758..2287841) FT /rpt_family="MIR" FT repeat_region complement(2288959..2289094) FT /rpt_family="(CA)n" FT repeat_region complement(2289163..2289299) FT /rpt_family="(CA)n" FT misc_feature complement(2289727..2291505) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 95.000" FT repeat_region complement(2290021..2290056) FT /rpt_family="GC_rich" FT repeat_region complement(2290387..2290490) FT /rpt_family="GC_rich" FT misc_feature complement(2290711..2291247) FT /note="BLASTX similarity to O02833 (77..255); match: 0.3, FT score: 1.4e-18; database searched: nr; INSULIN-LIKE GROWTH FT FACTOR BINDING PROTEIN COMPLEX ACID LABILE CHAIN PRECURSOR FT (ALS)" FT misc_feature complement(2290714..2291703) FT /note="BLASTX similarity to O02833 (45..374); match: 0.3, FT score: 9.7e-39; database searched: nr; INSULIN-LIKE GROWTH FT FACTOR BINDING PROTEIN COMPLEX ACID LABILE CHAIN PRECURSOR FT (ALS)" FT repeat_region complement(2291692..2291731) FT /rpt_family="GC_rich" FT repeat_region 2291910..2292209 FT /rpt_family="AluJo" FT repeat_region 2292234..2292418 FT /rpt_family="AluJo" FT repeat_region complement(2308035..2308106) FT /rpt_family="GC_rich" FT repeat_region complement(2308109..2308221) FT /rpt_family="(CGG)n" FT repeat_region complement(2308229..2308291) FT /rpt_family="GC_rich" FT repeat_region 2308528..2308574 FT /rpt_family="LINE2" FT repeat_region complement(2308705..2308734) FT /rpt_family="(GAAA)n" FT repeat_region complement(2308735..2309032) FT /rpt_family="AluSx" FT repeat_region complement(2309338..2309640) FT /rpt_family="AluSq" FT repeat_region 2310062..2310163 FT /rpt_family="MIR" FT repeat_region 2310425..2310504 FT /rpt_family="MIR" FT repeat_region 2310586..2310697 FT /rpt_family="LINE2" FT repeat_region complement(2310782..2311089) FT /rpt_family="AluY" FT repeat_region complement(2311096..2311384) FT /rpt_family="AluJo" FT repeat_region complement(2311440..2311616) FT /rpt_family="AluJo" FT repeat_region complement(2311620..2311917) FT /rpt_family="AluSq" FT repeat_region complement(2311932..2312233) FT /rpt_family="AluY" FT repeat_region complement(2312254..2312393) FT /rpt_family="FRAM" FT repeat_region complement(2312402..2312515) FT /rpt_family="MIR" FT repeat_region 2313354..2313627 FT /rpt_family="AluJo" FT repeat_region 2313642..2313764 FT /rpt_family="AluSq/x" FT repeat_region complement(2313949..2314245) FT /rpt_family="AluSg" FT repeat_region complement(2314625..2314651) FT /rpt_family="(GA)n" FT repeat_region complement(2314652..2314964) FT /rpt_family="AluJo" FT repeat_region complement(2314969..2315573) FT /rpt_family="L1" FT repeat_region complement(2315583..2315714) FT /rpt_family="FLAM_C" FT repeat_region complement(2315723..2315790) FT /rpt_family="LINE2" FT repeat_region complement(2316445..2316600) FT /rpt_family="FRAM" FT repeat_region complement(2316963..2317025) FT /rpt_family="(GGGA)n" FT repeat_region complement(2317027..2317328) FT /rpt_family="AluSx" FT repeat_region 2317482..2317568 FT /rpt_family="MIR" FT misc_feature 2317702..2317916 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 51.000" FT repeat_region complement(2318090..2318203) FT /rpt_family="(GA)n" FT repeat_region 2318261..2318433 FT /rpt_family="AluJo" FT repeat_region 2318709..2319005 FT /rpt_family="AluSq" FT repeat_region complement(2319091..2319197) FT /rpt_family="MIR" FT repeat_region 2320388..2320522 FT /rpt_family="AluSq/x" FT repeat_region 2320523..2320809 FT /rpt_family="AluSx" FT repeat_region complement(2320814..2320942) FT /rpt_family="FLAM_C" FT misc_feature complement(2321520..2328574) FT /note="LOC51690 gene; U6 snRNA-associated Sm-like protein FT LSm7" FT misc_feature complement(join(2321520..2321821,2324124..2324195, FT 2328386..2328476,2328560..2328574)) FT /note="Homo sapiens U6 snRNA-associated Sm-like protein FT LSm7 (LOC51690), mRNA" FT STS 2321574..2321750 FT /standard_name="stSG29317" FT /note="RH47890" FT CDS complement(join(2321679..2321821,2324124..2324195, FT 2328386..2328476,2328560..2328565)) FT /codon_start=1 FT /product="U6 snRNA-associated Sm-like protein LSm7" FT /protein_id="AAG45442.1" FT /translation="MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLN FT LVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA" FT CDS complement(join(2321679..2321821,2324124..2324191, FT 2328386..2328461,2328560..2328710)) FT /codon_start=1 FT /product="R30783_1" FT /note="Hypothetical human protein most similar to WP: FT ZK593.7 CE06628" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC25622.1" FT /translation="MSAGARRNQRQMFPSNAPRPRATHAPRMRVGEVKGRGAVPAKSHT FT ARQDGEKGEHLGLVQVHRQDDPGKVPGRPRSGILKGFDPLLNLVLDGTIEYMRDPDDQY FT KLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA" FT misc_feature complement(2321679..2321821) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 93.000~DDS similarity FT to overlapping ESTs: (24455..24153) AA121509 zk88c10.s1 FT Soares pregnant uterus NbHPU Homo sapiens cDNA clone 489906 FT 3' similar to WP: ZK593.7 CE06628 YEAST JTA107 LIKE ; FT (303..1); 99% identity.~(24455..24154) AA215299 zr94b05.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:683313 5' FT similar to WP:ZK593.7 CE06628 YEAST JTA107 LIKE ; (165..1); FT 88% identity.~Additional EST matches: AI018313, AI004446, FT AA989671, AI036173" FT repeat_region 2322257..2322559 FT /rpt_family="AluY" FT repeat_region complement(2322713..2323015) FT /rpt_family="AluJb" FT repeat_region 2323340..2323449 FT /rpt_family="AluJo/FLAM" FT repeat_region complement(2323453..2323750) FT /rpt_family="AluSx" FT repeat_region complement(2323763..2323799) FT /rpt_family="AT_rich" FT misc_feature complement(2324074..2324191) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 95.000~DDS similarity FT to overlapping ESTs: (26829..26758) AA215299 zr94b05.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:683313 5' FT similar to WP:ZK593.7 CE06628 YEAST JTA107 LIKE ; FT (96..164); 98% identity.~(27051..26758) AA121509 zk88c10.s1 FT Soares pregnant uterus NbHPU Homo sapiens cDNA clone 489906 FT 3' similar to WP: ZK593.7 CE06628 YEAST JTA107 LIKE ; FT (593..304); 97% identity." FT repeat_region 2324375..2324658 FT /rpt_family="MER58B" FT repeat_region 2324681..2324959 FT /rpt_family="L1MB7" FT misc_feature complement(2325194..2325242) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 86.000" FT repeat_region complement(2325665..2325880) FT /rpt_family="MER58A" FT repeat_region complement(2326312..2326355) FT /rpt_family="(CA)n" FT repeat_region complement(2326356..2326632) FT /rpt_family="AluSx" FT repeat_region complement(2326634..2326768) FT /rpt_family="AluSq/x" FT repeat_region 2327068..2327163 FT /rpt_family="MLT1E" FT repeat_region complement(2327258..2327539) FT /rpt_family="AluSc" FT repeat_region complement(2327543..2327700) FT /rpt_family="FRAM" FT repeat_region complement(2327817..2327984) FT /rpt_family="MIR" FT repeat_region 2327998..2328288 FT /rpt_family="AluSx" FT misc_feature 2328353..2328576 FT /note="BLASTN similarity to Z63483 (1..224); match: 0.97, FT score: 1.1e-80; database searched: nt; H.sapiens CpG DNA, FT clone 85a8, reverse read cpg85a8.rt1a ." FT misc_feature complement(2328386..2328476) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~(31095..31020) FT AA215299 zr94b05.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:683313 5' similar to WP:ZK593.7 CE06628 YEAST JTA107 FT LIKE ; (17..95); 91% identity." FT misc_feature complement(2328560..2328710) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 85.000" FT mRNA join(<2328680..2328774,2334601..2334720,2337442..2337624, FT 2338751..2338840,2339068..2339207,2339823..>2339925) FT /product="Homo sapiens mRNA for KIAA1532 protein, partial FT cds" FT /note="Start codon is not identified; LOC56928: mRNA for FT hypothetical protein from EUROIMAGE 42353" FT CDS join(<2328682..2328774,2334601..2334720,2337442..2337624, FT 2338751..2338840,2339068..2339207,2339823..>2339925) FT /codon_start=1 FT /product="KIAA1532 protein [Homo sapiens] partial amino FT acid sequence" FT /note="partial CDS, start codon not identified; LOC56928; FT hypothetical protein from EUROIMAGE 42353" FT /protein_id="AAG45441.1" FT /translation="RWLRRAPADMAAAVAAALARLLAAFLLLAAQVACEYGMVHVVSQA FT GGPEGKDYCILYNPQWAHLPHDLSKASFLQLRNWTASLLCSAADLPARGFSNQIPLVAR FT GNCTFYEKVRLAQGSGARGLLIVSRERLVPPGGNKTQYDEIGIPVALLSYKDMLDIFTR FT FGRTVRAALYAPKEPVLDYNMVIIFIMAVGTVAIGGYWAGSRDVKKRYMKHKRDDGPEK FT QEDEAVDVTPVMTCVFVVMCC" FT repeat_region 2329095..2329174 FT /rpt_family="MIR" FT repeat_region 2329721..2329780 FT /rpt_family="LINE2" FT repeat_region complement(2330110..2330413) FT /rpt_family="AluSx" FT repeat_region 2331735..2331924 FT /rpt_family="MER58A" FT repeat_region 2333022..2333162 FT /rpt_family="(GGA)n" FT misc_feature 2334601..2334720 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 66.000" FT repeat_region complement(2335855..2335974) FT /rpt_family="(CA)n" FT repeat_region complement(2336121..2336242) FT /rpt_family="(CA)n" FT repeat_region complement(2336425..2336555) FT /rpt_family="(CA)n" FT repeat_region complement(2336899..2337034) FT /rpt_family="(CA)n" FT misc_feature 2337454..2337624 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 86.000" FT misc_feature 2338751..2338840 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature 2339068..2339207 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature 2339678..2339965 FT /note="DDS similarity to overlapping ESTs:~(126..413) FT R59751 yh07a08.r1 Homo sapiens cDNA clone 42353 5'; FT (1..286); 95% identity.~~(163..381) R26492 yg63d02.r1 Homo FT sapiens cDNA clone 37573 5' gi|788920|gb|R26512|R26512 FT yg63h02.r1 Homo sapiens cDNA clone 37586 5' similar to FT contains L1 repetitive element ;.Score: 380 Identity: FT 207/217 (95%)." FT CDS join(2339830..2339965,2340075..2340195,2340896..2341012, FT 2343209..2343290,2343963..2344037,2344360..2344422, FT 2344551..2344650,2345251..2345328,2351432..2351592, FT 2352944..2353207) FT /codon_start=1 FT /product="fos39554_1" FT /note="Hypothetical 43.4 kDa human protein" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC05601.1" FT /translation="MKHKRDDGPEKQEDEAVDVTPVMTCVFVVMCCSMLVLLYYFYDLL FT VYVVIGIFCLASATGLYSCLAPCVRRLPSASAGESALLAPTIPNNSLPYFHKRPQARML FT LLALFCVAVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKACTLLLLVLFL FT YDIFFVFITPFLTKSGSSIMVEVATGPSDSATREKLPMVLKVPRLNSSPLALCDRPFSL FT LGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGVGLLVTFVALALMQRGQPALL FT YLVPCTLVTSCAVALWRRELGVFWTGSGFAKVLPPSPWAPAPADGPQPPKDSATPLSPQ FT PPSEEPATSPWPAEQSPKSRTSEEMGAGAPMREPGSPAESEGRDQAQPSPVTQPGASA" FT misc_feature 2339830..2339965 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 90.000" FT repeat_region complement(2339968..2340054) FT /rpt_family="GC_rich" FT misc_feature 2340075..2340212 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 75.000~~(523..648) DDS FT similarity to R59751 yh07a08.r1 Homo sapiens cDNA clone FT 42353 5'; (287..409); 80% identity." FT misc_feature 2340896..2341012 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(2341456..2341947) FT /note="DDS similarity to overlapping ESTs:~(2093..1904) FT R61296 yh07a08.s1 Homo sapiens cDNA clone 42353 3' similar FT to contains Alu repetitive element;contains TAR1 repetitive FT element ;. Score: 850 Identity: 473/492 FT (96%).~(2395..2063) R51007 yg63h02.s1 Homo sapiens cDNA FT clone 37586 3' similar to contains Alu repetitive element;. FT Score: 598 Identity: 326/337 (96%)." FT repeat_region 2341816..2341944 FT /rpt_family="FLAM_C" FT repeat_region 2342372..2342666 FT /rpt_family="AluSx" FT misc_feature 2343209..2343290 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature 2343963..2344037 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 86.000~~DDS similarity FT to overlapping ESTs:~AA323675 EST26494 Cerebellum II Homo FT sapiens cDNA 5' end (11..85); 100% identity.~~R51401 FT yg72b05.r1 Homo sapiens cDNA clone 38670 5'; (1..44); 98% FT identity.~~" FT repeat_region complement(2344072..2344188) FT /rpt_family="POLY_G" FT misc_feature 2344360..2344422 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 85.000~~DDS similarity FT to overlapping ESTs:~AA323675 EST26494 Cerebellum II Homo FT sapiens cDNA 5' end (86..148); 98% identity.~~R51401 FT yg72b05.r1 Homo sapiens cDNA clone 38670 5'; (45..107); 98% FT identity.~~AA283631 zt15f03.s1 NCI_CGAP_GCB1 Homo sapiens FT cDNA clone IMAGE:713213 3' similar to WP:C36B1.12 CE05379; FT (1..42); 88% identity." FT misc_feature 2344551..2344650 FT /note="DDS similarity to overlapping ESTs:~AA323675 FT EST26494 Cerebellum II Homo sapiens cDNA 5' end (149..248); FT 100% identity.~R51401 yg72b05.r1 Homo sapiens cDNA clone FT 38670 5'; (108..207); 100% identity.~AA283631 zt15f03.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:713213 3' FT similar to WP:C36B1.12 CE05379; (43..142); 100% identity." FT misc_feature 2345251..2345328 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA323675 EST26494 FT Cerebellum II Homo sapiens cDNA 5' end (249..288); 97% FT identity.~R51401 yg72b05.r1 Homo sapiens cDNA clone 38670 FT 5'; (208..285); 100% identity.~AA283631 zt15f03.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:713213 3' FT similar to WP:C36B1.12 CE05379; (143..220); 100% identity." FT repeat_region complement(2345954..2346065) FT /rpt_family="(GAAAA)n" FT repeat_region 2346382..2346682 FT /rpt_family="AluJo" FT repeat_region complement(2347004..2347116) FT /rpt_family="L1MC4" FT repeat_region complement(2348656..2348772) FT /rpt_family="(GA)n" FT repeat_region complement(2348975..2349076) FT /rpt_family="(GA)n" FT repeat_region complement(2349801..2349921) FT /rpt_family="(GA)n" FT repeat_region complement(2350022..2350146) FT /rpt_family="(GA)n" FT repeat_region complement(2350409..2350510) FT /rpt_family="(GA)n" FT repeat_region complement(2350542..2350811) FT /rpt_family="MER2" FT misc_feature 2351432..2351592 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 93.000~~DDS similarity FT to overlapping ESTs:~R51401 yg72b05.r1 Homo sapiens cDNA FT clone 38670 5'; (286..413); 86% identity.~~AA283631 FT zt15f03.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:713213 3' similar to WP:C36B1.12 CE05379; (221..304); FT 99% identity.~~AA258919 zs35a12.r1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone IMAGE:687166 5' (1..114); 93% identity." FT repeat_region complement(2351807..2351885) FT /rpt_family="GC_rich" FT misc_feature 2352944..2353430 FT /note="DDS similarity to overlapping ESTs:~(13392..13745) FT AA258919 zs35a12.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:687166 5' (115..463); 97% identity.~(13485..13878) FT T54207 ya90b09.r2 Homo sapiens cDNA clone 68921 5'. Score: FT 580 Identity: 355/398 (89%)." FT misc_feature complement(2354259..2354375) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 61.000" FT misc_feature 2354512..2354802 FT /note="DDS similarity to overlapping ESTs:~(14378..13904) FT AA025258 ze73h12.s1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 364679 3'; Score: 751 Identity: 443/480 FT (92%).~(14150..13912) AA489684 aa50c08.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:824366 3'; Score: 466 FT Identity: 236/239 (98%).~(14375..14000) AA454599 zx96b02.s1 FT Soares ovary tumor NbHOT Homo sapiens cDNA clone 811563 3'; FT Score: 709 Identity: 368/375 (98%).~(14342..14014) T54114 FT ya90b09.s2 Homo sapiens cDNA clone 68921 3'. Score: 549 FT Identity: 313/326 (96%).~(14246..14641) W76625 zd63b07.r1 FT Soares fetal heart NbHH19W Homo sapiens cDNA clone 345301 FT 5'; Score: 746 Identity: 391/398 (98%).~(14627..14960) FT W24494 zb60f11.r1 Soares fetal lung NbHL19W Homo sapiens FT cDNA clone 308013 5'; Score: 627 Identity: 328/333 FT (98%).~(15250..14660) AA524740 ng42g03.s1 NCI_CGAP_Co3 Homo FT sapiens cDNA clone IMAGE:937492; Score: 1049 Identity: FT 568/602 (94%).~(15250..14794) AA502920 ne42g09.s1 FT NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:900064; Score: FT 855 Identity: 449/472 (95%).~(15247..14796) AA471016 FT ne22c03.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:881956; Score: 851 Identity: 443/451 (98%)." FT misc_feature complement(2354780..2355023) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 69.000" FT repeat_region complement(2355083..2355196) FT /rpt_family="FLAM_C" FT repeat_region 2355221..2355311 FT /rpt_family="MER58B" FT repeat_region 2355507..2355792 FT /rpt_family="AluJo" FT repeat_region complement(2356783..2356961) FT /rpt_family="(TGGA)n" FT repeat_region complement(2356963..2357024) FT /rpt_family="(TGGA)n" FT repeat_region complement(2357026..2357144) FT /rpt_family="(TGGA)n" FT repeat_region complement(2357154..2357271) FT /rpt_family="(TGGA)n" FT repeat_region complement(2357411..2357652) FT /rpt_family="(TGGA)n" FT repeat_region complement(2357661..2357780) FT /rpt_family="(TGGA)n" FT repeat_region complement(2357891..2358161) FT /rpt_family="(TGGA)n" FT repeat_region 2358994..2359386 FT /rpt_family="L1MD3" FT repeat_region 2359393..2359533 FT /rpt_family="AluJo" FT repeat_region 2359557..2359757 FT /rpt_family="AluJb" FT repeat_region 2359758..2359791 FT /rpt_family="(CA)n" FT repeat_region complement(2360150..2360196) FT /rpt_family="GC_rich" FT misc_feature 2360210..2360294 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 83.000" FT repeat_region complement(2361981..2362109) FT /rpt_family="(CA)n" FT repeat_region complement(2362125..2362243) FT /rpt_family="(CA)n" FT repeat_region complement(2362331..2362510) FT /rpt_family="(CA)n" FT repeat_region complement(2362549..2362679) FT /rpt_family="(CA)n" FT misc_feature 2362610..2362785 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 59.000" FT repeat_region complement(2362829..2362953) FT /rpt_family="(CA)n" FT repeat_region complement(2363779..2363846) FT /rpt_family="(CA)n" FT repeat_region 2363822..2363878 FT /rpt_family="(GA)n" FT repeat_region 2364051..2364189 FT /rpt_family="AluJo/FRAM" FT repeat_region 2364191..2364237 FT /rpt_family="(TGAA)n" FT repeat_region complement(2364414..2364545) FT /rpt_family="FLAM_C" FT repeat_region complement(2364605..2364699) FT /rpt_family="L1MD3" FT repeat_region 2364702..2364996 FT /rpt_family="AluY" FT repeat_region complement(2365025..2365085) FT /rpt_family="L1MD3" FT repeat_region 2365597..2365646 FT /rpt_family="(CAAA)n" FT repeat_region 2365685..2365980 FT /rpt_family="AluJo" FT repeat_region 2366162..2366362 FT /rpt_family="AluJo" FT repeat_region complement(2366405..2366573) FT /rpt_family="MLT1F" FT repeat_region 2366574..2366874 FT /rpt_family="AluY" FT repeat_region complement(2366882..2367144) FT /rpt_family="MLT1F" FT repeat_region 2367245..2367394 FT /rpt_family="MIR" FT repeat_region complement(2367400..2367559) FT /rpt_family="AluSx" FT repeat_region complement(2367560..2367862) FT /rpt_family="AluY" FT repeat_region complement(2367863..2368007) FT /rpt_family="AluSx" FT repeat_region complement(2368381..2368506) FT /rpt_family="LINE2" FT repeat_region complement(2368781..2368949) FT /rpt_family="AluSg/x" FT repeat_region complement(2368950..2369242) FT /rpt_family="AluSq" FT repeat_region complement(2369266..2369408) FT /rpt_family="LINE2" FT repeat_region complement(2369423..2369736) FT /rpt_family="AluJo" FT repeat_region complement(2369747..2369920) FT /rpt_family="MLT1E" FT repeat_region 2369932..2370210 FT /rpt_family="AluSq" FT repeat_region 2370219..2370438 FT /rpt_family="AluY" FT repeat_region complement(2370477..2370626) FT /rpt_family="AluJo" FT repeat_region 2370758..2370972 FT /rpt_family="AluJo" FT misc_feature complement(2371217..2371333) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 60.000" FT repeat_region 2371404..2371715 FT /rpt_family="AluSx" FT repeat_region complement(2371956..2372153) FT /rpt_family="AluSq" FT repeat_region complement(2372835..2373130) FT /rpt_family="AluJo" FT repeat_region complement(2373225..2373469) FT /rpt_family="AluSx" FT misc_feature 2377434..2377717 FT /note="NOTE: Shatter libraries failed to resolve the FT dinucleotide repeat region 3088-3371. False join at 3245." FT misc_feature 2419001 FT /note="NOTE: Shatter libraries failed to resolve FT dinucleotide repeat region. False join at 10251." FT repeat_region complement(2450463..2450523) FT /rpt_family="AluS" FT repeat_region 2450533..2450628 FT /rpt_family="AluSx" FT repeat_region complement(2450668..2450925) FT /rpt_family="AluSg" FT repeat_region 2450958..2451257 FT /rpt_family="AluSx" FT repeat_region complement(2451270..2451458) FT /rpt_family="MER58B" FT misc_feature complement(2451804..2451905) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 63.000" FT repeat_region 2452280..2452443 FT /rpt_family="AluSx" FT repeat_region 2452444..2452740 FT /rpt_family="AluSg" FT repeat_region complement(2453129..2453239) FT /rpt_family="MER20" FT repeat_region 2454009..2454310 FT /rpt_family="AluSx" FT repeat_region complement(2454458..2454570) FT /rpt_family="MIR" FT repeat_region complement(2456554..2456650) FT /rpt_family="GC_rich" FT CDS complement(<2456668..2456871) FT /codon_start=1 FT /product="LAM2_HUMAN, partial CDS" FT /note="Human homolog of mouse lamin B2; Shares over 90% FT residue identity with P21619 LAM2_MOUSE" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC34573.1" FT /translation="MATPLPGRAGGPATPLSPTRLSRLQEKEELRELNDRLAHYIDRVR FT ALELENDRLLLKISEKEEVTTRE" FT repeat_region 2456799..2456912 FT /rpt_family="(CGG)n" FT repeat_region complement(2456958..2457047) FT /rpt_family="GC_rich" FT repeat_region 2457229..2457515 FT /rpt_family="AluSx" FT repeat_region 2457517..2457567 FT /rpt_family="L1MB7" FT repeat_region 2457757..2457893 FT /rpt_family="FLAM_C" FT repeat_region 2457900..2458198 FT /rpt_family="AluSg" FT repeat_region 2458208..2458356 FT /rpt_family="AluJb" FT repeat_region 2458524..2458652 FT /rpt_family="AluJo" FT repeat_region complement(2458653..2458939) FT /rpt_family="AluSg1" FT repeat_region 2458941..2459125 FT /rpt_family="AluJo" FT repeat_region complement(2459128..2459244) FT /rpt_family="MER57_internal" FT repeat_region 2459245..2459535 FT /rpt_family="AluSx" FT repeat_region complement(2459574..2459713) FT /rpt_family="MER20" FT repeat_region complement(2459734..2460035) FT /rpt_family="AluSx" FT repeat_region complement(2460040..2460124) FT /rpt_family="MER20" FT repeat_region 2460376..2460495 FT /rpt_family="AluJo" FT repeat_region complement(2460509..2460801) FT /rpt_family="AluSx" FT repeat_region 2460803..2460969 FT /rpt_family="AluJo" FT repeat_region complement(2460970..2461269) FT /rpt_family="AluSx" FT repeat_region complement(2461495..2461785) FT /rpt_family="AluSx" FT repeat_region complement(2462445..2462540) FT /rpt_family="MIR" FT repeat_region 2462580..2462887 FT /rpt_family="AluSq" FT misc_feature complement(2463021..2463420) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 59.000" FT repeat_region complement(2463587..2463628) FT /rpt_family="LINE2" FT repeat_region 2463678..2463969 FT /rpt_family="AluJb" FT repeat_region 2463973..2464274 FT /rpt_family="AluSx" FT repeat_region complement(2464394..2464507) FT /rpt_family="FLAM_C" FT repeat_region complement(2464515..2464639) FT /rpt_family="MLT1E" FT repeat_region complement(2464756..2464810) FT /rpt_family="MLT2CB" FT repeat_region complement(2464816..2465113) FT /rpt_family="AluSp" FT repeat_region complement(2465114..2465201) FT /rpt_family="MLT2G" FT repeat_region complement(2465206..2465496) FT /rpt_family="AluSx" FT repeat_region complement(2465535..2465814) FT /rpt_family="MLT2G" FT repeat_region 2465816..2466124 FT /rpt_family="AluSx" FT repeat_region 2466145..2466282 FT /rpt_family="AluJo" FT repeat_region complement(2466323..2466614) FT /rpt_family="AluSc" FT repeat_region 2466644..2466720 FT /rpt_family="LTR8" FT repeat_region 2466858..2467158 FT /rpt_family="AluSx" FT repeat_region 2467462..2467791 FT /rpt_family="AluSg1" FT repeat_region complement(2467924..2468224) FT /rpt_family="AluSx" FT repeat_region complement(2468230..2468378) FT /rpt_family="FLAM_C" FT repeat_region 2468421..2468585 FT /rpt_family="FRAM" FT misc_feature complement(2468608..2468686) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 58.000" FT repeat_region complement(2468745..2468842) FT /rpt_family="MER77" FT repeat_region complement(2468854..2469161) FT /rpt_family="AluSx" FT repeat_region complement(2469267..2469376) FT /rpt_family="MIR" FT repeat_region 2469742..2469905 FT /rpt_family="LINE2" FT repeat_region complement(2469923..2470224) FT /rpt_family="AluSx" FT repeat_region complement(2470234..2470402) FT /rpt_family="AluJo" FT repeat_region 2470417..2470696 FT /rpt_family="AluSg" FT repeat_region 2470698..2470997 FT /rpt_family="AluY" FT repeat_region complement(2470998..2471109) FT /rpt_family="AluJo" FT repeat_region 2471118..2471208 FT /rpt_family="AluJb" FT repeat_region complement(2471209..2471287) FT /rpt_family="MLT1A2" FT repeat_region complement(2471321..2471621) FT /rpt_family="AluY" FT repeat_region complement(2471668..2471697) FT /rpt_family="AT_rich" FT repeat_region 2471706..2471999 FT /rpt_family="AluSx" FT misc_feature complement(2472039..2472066) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 94.000" FT repeat_region complement(2472085..2472386) FT /rpt_family="AluJo" FT repeat_region complement(2472467..2472504) FT /rpt_family="MIR" FT repeat_region complement(2472516..2472818) FT /rpt_family="AluSq" FT repeat_region complement(2473214..2473514) FT /rpt_family="AluSx" FT repeat_region complement(2473516..2473652) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(2473678..2473993) FT /rpt_family="AluSx" FT repeat_region complement(2474008..2474283) FT /rpt_family="AluSg" FT repeat_region complement(2474426..2474531) FT /rpt_family="AluSq/x" FT repeat_region complement(2474540..2474569) FT /rpt_family="AT_rich" FT repeat_region complement(2475334..2475356) FT /rpt_family="GC_rich" FT repeat_region complement(2475920..2475981) FT /rpt_family="GC_rich" FT mRNA 2476158..2478257 FT /product="Human myeloid differentiation primary response FT protein MYD118 mRNA" FT /note="Constructed from overlapping ESTs." FT misc_feature 2476158..2476400 FT /note="DDS similarity to overlapping ESTs:~(27626..27868) FT W30818 zc65f11.r1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 327213 5' similar to SW:MY18_MOUSE P22339 FT MYELOID DIFFERENTIATION PRIMARY RESPONSE PROTEIN MYD118. FT [1] ; (1..243); 99% identity.~~~(27825..27868) predicted FT exon, program: grail2exons_human_1.3, frame: 2, quality: FT good, score: 74.000~~Additional EST matches: T35368, FT M77995, T33963, T35563, T29941, T40088" FT CDS join(2476357..2476400,2476527..2476628,2477027..2477249, FT 2477486..2477599) FT /codon_start=1 FT /product="MY18_HUMAN" FT /function="Myeloid differentiation primary response protein FT MYD118" FT /note="Human homolog of mouse protein MYD118; Also similar FT to gb:M60974 GROWTH ARREST AND DNA-DAMAGE-INDUCIBLE PROTEIN FT GADD45 (HUMAN)" FT /protein_id="AAC34572.1" FT /translation="MTLEELVACDNAAQKMQTVTAAVEELLVAAQRQDRLTVGVYESAK FT LMNVDPDSVVLCLLAIDEEEEDDIALQIHFTLIQSFCCDNDINIVRVSGMQRLAQLLGE FT PAETQGTTEARDLHCLLVTNPHTDAWKSHGLVEVASYCEESRGNNQWVPYISLQER" FT misc_feature 2476527..2476628 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~W30818 zc65f11.r1 Soares FT fetal heart NbHH19W Homo sapiens cDNA clone 327213 5' FT similar to SW:MY18_MOUSE P22339 MYELOID DIFFERENTIATION FT PRIMARY RESPONSE PROTEIN MYD118. [1] ; (244..347); 98% FT identity.~~(28047..28096) N30908 yw76g06.s1 Homo sapiens FT cDNA clone 258202 3' similar to gb:M60974 GROWTH ARREST AND FT DNA-DAMAGE-INDUCIBLE PROTEIN GADD45 (HUMAN); (572..523); FT 90% identity.~~Additional EST matches: T35368, M77995, FT T29941, T33963" FT misc_feature 2477027..2477249 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 97.000~~DDS similarity FT to overlapping ESTs:~(28495..28673) W30818 zc65f11.r1 FT Soares fetal heart NbHH19W Homo sapiens cDNA clone 327213 FT 5' similar to SW:MY18_MOUSE P22339 MYELOID DIFFERENTIATION FT PRIMARY RESPONSE PROTEIN MYD118. [1] ; (348..528); 97% FT identity.~~N30908 yw76g06.s1 Homo sapiens cDNA clone 258202 FT 3' similar to gb:M60974 GROWTH ARREST AND FT DNA-DAMAGE-INDUCIBLE PROTEIN GADD45 (HUMAN); (522..297); FT 97% identity.~~(28528..28717) W04530 zb91b07.s1 Soares FT parathyroid tumor NbHPA Homo sapiens cDNA clone 320149 3' FT similar to SW:MY18_MOUSE P22339 MYELOID DIFFERENTIATION FT PRIMARY RESPONSE PROTEIN MYD118. [1] ; (487..297); 96% FT identity. ~~~Additional EST matches: M77995, T33963, FT AI079355, AI079097, AI085175" FT misc_feature 2477486..2478257 FT /note="DDS similarity to overlapping ESTs:~(28954..29247) FT N30908 yw76g06.s1 Homo sapiens cDNA clone 258202 3' similar FT to gb:M60974 GROWTH ARREST AND DNA-DAMAGE-INDUCIBLE PROTEIN FT GADD45 (HUMAN); (522..297); 97% identity.~~(28954..29249) FT |W04530 zb91b07.s1 Soares parathyroid tumor NbHPA Homo FT sapiens cDNA clone 320149 3' similar to SW:MY18_MOUSE FT P22339 MYELOID DIFFERENTIATION PRIMARY RESPONSE PROTEIN FT MYD118. [1] ; (296..1); 98% identity.~~(29076..29566) FT H53941 yq87c09.r1 Homo sapiens cDNA clone 202768 5'. Score: FT 816 Identity: 464/501 (92%).~~(29123..29694) W91926 FT zh47b09.r1 Soares fetal liver spleen 1NFLS S1 Homo sapiens FT cDNA clone 415193 5';~Score: 1004 Identity: 546/572 FT (95%).~~Additional EST matches: H44356, N95168, AA113188, FT D20061, W91956, R62956, AI079097, D31047, AI077549, T30349 FT and many others~~~(28954..29067) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 82.000" FT repeat_region 2479258..2479387 FT /rpt_family="(GGA)n" FT repeat_region complement(2479700..2479976) FT /rpt_family="AluSx" FT repeat_region 2480161..2480272 FT /rpt_family="MIR" FT repeat_region 2480287..2480597 FT /rpt_family="AluJo" FT repeat_region 2480694..2480738 FT /rpt_family="Alu" FT repeat_region 2480773..2481074 FT /rpt_family="AluSx" FT repeat_region complement(2481076..2481192) FT /rpt_family="AluJb" FT repeat_region complement(2481389..2481444) FT /rpt_family="MIR" FT repeat_region 2481817..2481933 FT /rpt_family="(CA)n" FT repeat_region 2481980..2482263 FT /rpt_family="AluSx" FT repeat_region complement(2482264..2482331) FT /rpt_family="AluS" FT repeat_region complement(2482336..2482634) FT /rpt_family="AluJo" FT repeat_region complement(2482650..2482762) FT /rpt_family="MIR" FT repeat_region 2482778..2482903 FT /rpt_family="(CA)n" FT repeat_region complement(2482905..2482963) FT /rpt_family="(TA)n" FT repeat_region complement(2482974..2483307) FT /rpt_family="L1MB7" FT repeat_region 2483324..2483628 FT /rpt_family="AluJo" FT repeat_region 2483851..2483963 FT /rpt_family="LINE2" FT repeat_region complement(2484032..2484076) FT /rpt_family="Alu" FT repeat_region 2484093..2484256 FT /rpt_family="LINE2" FT repeat_region 2484436..2484613 FT /rpt_family="MIR" FT repeat_region complement(2484965..2485246) FT /rpt_family="AluSx" FT repeat_region complement(2485248..2485536) FT /rpt_family="AluJb" FT repeat_region complement(2485539..2485622) FT /rpt_family="LINE2" FT repeat_region 2485736..2485772 FT /rpt_family="MLT1C" FT repeat_region 2485776..2485908 FT /rpt_family="FLAM_C" FT repeat_region 2485914..2486209 FT /rpt_family="AluSc" FT repeat_region complement(2486491..2486523) FT /rpt_family="(TAAAA)n" FT repeat_region complement(2486524..2486825) FT /rpt_family="AluY" FT repeat_region complement(2486828..2487101) FT /rpt_family="AluSq" FT misc_feature complement(2487280..2487382) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 67.000" FT repeat_region complement(2487561..2487688) FT /rpt_family="FLAM_C" FT misc_feature complement(2488558..2488952) FT /note="BLASTN similarity to cpg254e2.rt1a (1..395); match: FT 1, score: 6.9e-158; database searched: Sanger CpG; bases 78 FT to 472 (SL to QR)" FT repeat_region 2489195..2489302 FT /rpt_family="GC_rich" FT repeat_region complement(2489397..2489432) FT /rpt_family="GC_rich" FT misc_feature 2489626..2490064 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 54.000" FT repeat_region complement(2490120..2490434) FT /rpt_family="AluSx" FT repeat_region complement(2490438..2490740) FT /rpt_family="AluSq" FT repeat_region 2491593..2491684 FT /rpt_family="LINE2" FT repeat_region complement(2491955..2492256) FT /rpt_family="AluY" FT repeat_region complement(2492277..2492577) FT /rpt_family="AluSx" FT misc_feature 2492979..2493010 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 56.000" FT repeat_region complement(2493322..2493364) FT /rpt_family="(TAAAA)n" FT repeat_region complement(2493367..2493669) FT /rpt_family="AluSx" FT repeat_region complement(2493693..2493899) FT /rpt_family="L1MC2" FT repeat_region complement(2493905..2493954) FT /rpt_family="MIR" FT repeat_region complement(2494346..2494381) FT /rpt_family="(CA)n" FT repeat_region complement(2494913..2494935) FT /rpt_family="GC_rich" FT repeat_region complement(2495137..2495192) FT /rpt_family="MIR" FT repeat_region complement(2495889..2495935) FT /rpt_family="(GGA)n" FT repeat_region complement(2496381..2496690) FT /rpt_family="AluSx" FT repeat_region complement(2496691..2496939) FT /rpt_family="AluJo" FT repeat_region 2496946..2497085 FT /rpt_family="MIR" FT repeat_region complement(2497406..2497655) FT /rpt_family="MLT1D" FT repeat_region complement(2497719..2498016) FT /rpt_family="AluSp" FT repeat_region complement(2498062..2498363) FT /rpt_family="AluJo" FT repeat_region complement(2498603..2498667) FT /rpt_family="MIR" FT repeat_region 2498697..2498996 FT /rpt_family="AluY" FT repeat_region complement(2499608..2499909) FT /rpt_family="AluY" FT repeat_region complement(2500491..2500792) FT /rpt_family="AluSp" FT repeat_region 2501252..2501553 FT /rpt_family="AluSx" FT repeat_region 2501726..2501846 FT /rpt_family="HERVL" FT repeat_region complement(2501965..2502146) FT /rpt_family="L1MC2" FT repeat_region complement(2502148..2502440) FT /rpt_family="AluSx" FT repeat_region complement(2502441..2502558) FT /rpt_family="L1MC2" FT repeat_region complement(2502606..2502704) FT /rpt_family="MLT1D" FT repeat_region complement(2502718..2503016) FT /rpt_family="AluY" FT repeat_region complement(2503017..2503044) FT /rpt_family="AT_rich" FT repeat_region complement(2503045..2503138) FT /rpt_family="U6" FT repeat_region complement(2503164..2503453) FT /rpt_family="AluSp" FT repeat_region complement(2503569..2503759) FT /rpt_family="MER45" FT misc_feature 2503887..2503911 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 63.000" FT repeat_region 2504178..2504461 FT /rpt_family="MLT1D" FT repeat_region complement(2504462..2504497) FT /rpt_family="AT_rich" FT repeat_region complement(2504580..2504659) FT /rpt_family="L1PA10" FT repeat_region 2504663..2504956 FT /rpt_family="AluSx" FT repeat_region complement(2504957..2505231) FT /rpt_family="L1PA9" FT repeat_region complement(2505232..2505525) FT /rpt_family="AluY" FT repeat_region 2505765..2506069 FT /rpt_family="AluJo" FT repeat_region 2506214..2506527 FT /rpt_family="AluSp" FT repeat_region complement(2506615..2506915) FT /rpt_family="AluSx" FT repeat_region complement(2506960..2506993) FT /rpt_family="AT_rich" FT repeat_region 2507216..2507352 FT /rpt_family="MIR" FT repeat_region complement(2507539..2507656) FT /rpt_family="(GA)n" FT repeat_region complement(2507657..2507955) FT /rpt_family="AluY" FT repeat_region complement(2508004..2508029) FT /rpt_family="(CA)n" FT repeat_region complement(2508030..2508330) FT /rpt_family="AluSx" FT repeat_region complement(2508372..2508676) FT /rpt_family="AluSp" FT repeat_region 2508806..2509106 FT /rpt_family="AluY" FT repeat_region 2509170..2509244 FT /rpt_family="MADE1" FT repeat_region 2509282..2509602 FT /rpt_family="L1MB7" FT repeat_region complement(2509637..2509932) FT /rpt_family="AluSq" FT repeat_region complement(2510048..2510350) FT /rpt_family="AluSq" FT repeat_region complement(2510367..2510671) FT /rpt_family="AluSg" FT repeat_region complement(2510672..2510967) FT /rpt_family="AluSx" FT misc_feature 2511218..2512111 FT /note="DDS similarity to overlapping ESTs:~(25247..25624) FT N49963 yz11b12.s1 Homo sapiens cDNA clone 282719 3'. Score: FT 690 Identity: 372/384 (96%).~~(25247..25714) N47607 FT yy59e06.s1 Homo sapiens cDNA clone 277858 3'. Score: 891 FT Identity: 462/471 (98%).~~(25909..25621) H46880 yo19f02.r1 FT Homo sapiens cDNA clone 178395 5'. Score: 550 Identity: FT 282/289 (97%).~~(26140..25687) W79897 zd79a07.r1 Soares FT fetal heart NbHH19W Homo sapiens cDNA clone 346836 5'; FT Score: 866 Identity: 447/456 (98%).~~Additional EST FT matches:~H46023, and many others" FT repeat_region 2513917..2514215 FT /rpt_family="AluSq" FT mRNA complement(2514448..2520717) FT /product="Homo sapiens mRNA for G-protein gamma 7" FT repeat_region 2514950..2515003 FT /rpt_family="(GA)n" FT CDS complement(join(2515020..2515145,2520606..2520686)) FT /codon_start=1 FT /gene="GNG7" FT /product="GBG7_HUMAN" FT /function="guanine nucleotide binding protein" FT /note="G-protein gamma 7" FT /protein_id="AAC32595.1" FT /translation="MSATNNIAQARKLVEQLRIEAGIERIKVSKAASDLMSYCEQHARN FT DPLLVGVPASENPFKDKKPCIIL" FT repeat_region 2515186..2515423 FT /rpt_family="L1ME1" FT repeat_region complement(2515424..2515723) FT /rpt_family="AluSg" FT repeat_region 2515724..2515920 FT /rpt_family="L1MB7" FT repeat_region 2515931..2516234 FT /rpt_family="AluJb" FT repeat_region complement(2516279..2516521) FT /rpt_family="AluSq" FT repeat_region complement(2516522..2516543) FT /rpt_family="AT_rich" FT repeat_region complement(2517178..2517361) FT /rpt_family="AluJo" FT repeat_region complement(2517363..2517662) FT /rpt_family="AluSx" FT repeat_region complement(2517669..2517809) FT /rpt_family="AluJo" FT misc_feature complement(2518347..2518519) FT /gene="GNG7" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 64.000" FT misc_feature complement(2518557..2518616) FT /gene="GNG7" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 2518725..2518784 FT /rpt_family="MLT2FB" FT repeat_region complement(2518791..2519093) FT /rpt_family="AluSg" FT repeat_region complement(2519147..2519453) FT /rpt_family="AluSx" FT repeat_region complement(2519456..2519583) FT /rpt_family="AluJo/FLAM" FT repeat_region 2519602..2519835 FT /rpt_family="MLT2FB" FT repeat_region 2519896..2520198 FT /rpt_family="AluSx" FT repeat_region complement(2520409..2520518) FT /rpt_family="MIR" FT repeat_region 2520972..2521283 FT /rpt_family="AluY" FT repeat_region 2521372..2521560 FT /rpt_family="MER20" FT repeat_region complement(2521611..2521898) FT /rpt_family="AluSx" FT repeat_region 2522043..2522243 FT /rpt_family="MER20" FT repeat_region 2522491..2522769 FT /rpt_family="AluY" FT repeat_region complement(2522875..2523164) FT /rpt_family="AluSx" FT repeat_region 2523166..2523266 FT /rpt_family="L1MD2" FT repeat_region 2523269..2523501 FT /rpt_family="AluJo" FT repeat_region 2523560..2523834 FT /rpt_family="L1MD2" FT repeat_region complement(2524328..2524399) FT /rpt_family="(CATA)n" FT repeat_region complement(2524401..2524572) FT /rpt_family="(CA)n" FT repeat_region complement(2524591..2524719) FT /rpt_family="(CATG)n" FT repeat_region complement(2524803..2524918) FT /rpt_family="(CA)n" FT misc_feature complement(2525146..2525315) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 76.000" FT repeat_region complement(2525814..2525967) FT /rpt_family="AluSx" FT repeat_region complement(2525970..2526267) FT /rpt_family="AluY" FT repeat_region complement(2526268..2526402) FT /rpt_family="AluSx" FT repeat_region complement(2526412..2526585) FT /rpt_family="(TAAAA)n" FT repeat_region complement(2526651..2526769) FT /rpt_family="(TAAA)n" FT repeat_region complement(2526851..2527141) FT /rpt_family="AluSg" FT repeat_region complement(2527149..2527338) FT /rpt_family="L1MD2" FT repeat_region complement(2527684..2527853) FT /rpt_family="MER20" FT repeat_region 2527985..2528288 FT /rpt_family="AluSx" FT repeat_region 2528289..2528496 FT /rpt_family="AluY" FT repeat_region 2528706..2528766 FT /rpt_family="MIR" FT repeat_region complement(2529214..2529515) FT /rpt_family="AluSx" FT repeat_region 2530129..2530190 FT /rpt_family="AluJ/FLAM" FT repeat_region 2541451..2541754 FT /rpt_family="AluSg" FT repeat_region 2541758..2541930 FT /rpt_family="AluJo" FT repeat_region complement(2542111..2542413) FT /rpt_family="AluSx" FT repeat_region 2542450..2542695 FT /rpt_family="MLT1E" FT repeat_region complement(2542909..2543216) FT /rpt_family="AluSx" FT repeat_region complement(2543220..2543522) FT /rpt_family="AluJb" FT misc_feature 2543744..2543813 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 84.000" FT repeat_region complement(2544434..2544688) FT /rpt_family="AluSq" FT repeat_region 2544691..2544904 FT /rpt_family="MER20" FT repeat_region 2545133..2545325 FT /rpt_family="MER20" FT repeat_region 2545364..2545667 FT /rpt_family="AluSq" FT repeat_region 2545670..2545972 FT /rpt_family="AluSx" FT misc_feature complement(2546213..2546340) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 60.000" FT repeat_region complement(2547247..2547667) FT /rpt_family="MLT1D" FT repeat_region 2548197..2548498 FT /rpt_family="AluSx" FT repeat_region 2548506..2548805 FT /rpt_family="AluSx" FT repeat_region complement(2549292..2549580) FT /rpt_family="AluSg1" FT repeat_region complement(2550227..2550525) FT /rpt_family="AluSx" FT repeat_region 2550659..2550814 FT /rpt_family="MIR" FT misc_feature 2551218..2551356 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 62.000" FT repeat_region 2551492..2551695 FT /rpt_family="(TA)n" FT repeat_region complement(2551696..2551981) FT /rpt_family="AluSx" FT repeat_region 2551988..2552153 FT /rpt_family="MER1A" FT repeat_region 2552157..2552318 FT /rpt_family="AluSx" FT repeat_region 2552320..2552379 FT /rpt_family="MER1A" FT repeat_region complement(2552381..2552682) FT /rpt_family="AluSx" FT repeat_region 2552685..2552931 FT /rpt_family="MER1A" FT repeat_region 2552932..2553121 FT /rpt_family="L1" FT misc_feature 2553158..2553267 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 69.000" FT repeat_region 2553382..2553498 FT /rpt_family="(TA)n" FT repeat_region 2553507..2553628 FT /rpt_family="(CATA)n" FT repeat_region 2553701..2553826 FT /rpt_family="(CATA)n" FT repeat_region 2553918..2554026 FT /rpt_family="(TA)n" FT repeat_region 2554031..2554120 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(2554146..2554179) FT /rpt_family="AT_rich" FT repeat_region complement(2554180..2554499) FT /rpt_family="AluJo" FT repeat_region complement(2554500..2554557) FT /rpt_family="(TA)n" FT repeat_region complement(2554558..2554851) FT /rpt_family="AluSx" FT misc_feature complement(2555147..2555186) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 95.000" FT repeat_region complement(2556748..2556955) FT /rpt_family="MER20" FT repeat_region 2557011..2557154 FT /rpt_family="(CA)n" FT repeat_region 2557158..2557197 FT /rpt_family="(CA)n" FT repeat_region 2557200..2557366 FT /rpt_family="(CA)n" FT repeat_region complement(2557841..2558138) FT /rpt_family="AluY" FT repeat_region complement(2558239..2558530) FT /rpt_family="AluJo" FT repeat_region complement(2558698..2558795) FT /rpt_family="(GAAA)n" FT repeat_region complement(2558797..2559097) FT /rpt_family="AluSx" FT repeat_region 2559126..2559173 FT /rpt_family="(TA)n" FT repeat_region 2559187..2559347 FT /rpt_family="MER82" FT repeat_region complement(2559348..2559516) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(2559517..2559808) FT /rpt_family="AluSp" FT misc_feature complement(2559799..2559921) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 74.000" FT repeat_region 2559922..2560228 FT /rpt_family="MER82" FT repeat_region 2560471..2560581 FT /rpt_family="MER20" FT repeat_region 2560674..2560971 FT /rpt_family="AluSx" FT repeat_region 2561203..2561407 FT /rpt_family="MER20" FT repeat_region 2561594..2561891 FT /rpt_family="AluSq" FT repeat_region complement(2562280..2562461) FT /rpt_family="AluSg/x" FT repeat_region complement(2562941..2563245) FT /rpt_family="AluY" FT repeat_region complement(2563271..2563423) FT /rpt_family="MER20" FT repeat_region complement(2563477..2563779) FT /rpt_family="AluSx" FT misc_feature 2563890..2563959 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 52.000" FT repeat_region 2564118..2564299 FT /rpt_family="MLT1C" FT repeat_region 2564307..2564587 FT /rpt_family="AluSx" FT repeat_region 2564592..2564876 FT /rpt_family="MLT1C" FT repeat_region 2564907..2565036 FT /rpt_family="FLAM_C" FT repeat_region 2565229..2565528 FT /rpt_family="AluSg" FT repeat_region 2565874..2566175 FT /rpt_family="AluSx" FT repeat_region 2566186..2566495 FT /rpt_family="MLT1C" FT repeat_region 2566639..2566812 FT /rpt_family="MER58A" FT repeat_region 2566820..2567129 FT /rpt_family="AluSx" FT repeat_region 2567131..2567173 FT /rpt_family="POLY_A" FT repeat_region complement(2567348..2567623) FT /rpt_family="AluJb" FT repeat_region complement(2567646..2567763) FT /rpt_family="MER58A" FT repeat_region 2567996..2568061 FT /rpt_family="(CA)n" FT repeat_region 2568064..2568199 FT /rpt_family="(CATA)n" FT repeat_region 2568203..2568315 FT /rpt_family="(CA)n" FT repeat_region 2568316..2568450 FT /rpt_family="(CATA)n" FT repeat_region complement(2568457..2568617) FT /rpt_family="(CA)n" FT repeat_region 2568618..2568923 FT /rpt_family="(CATA)n" FT repeat_region 2568995..2569111 FT /rpt_family="(CA)n" FT repeat_region complement(2569272..2569572) FT /rpt_family="AluY" FT repeat_region complement(2569770..2569878) FT /rpt_family="MER20" FT repeat_region 2569952..2570392 FT /rpt_family="MSTB" FT repeat_region complement(2570801..2571098) FT /rpt_family="AluJb" FT repeat_region complement(2571592..2571893) FT /rpt_family="AluSx" FT repeat_region complement(2572019..2572310) FT /rpt_family="AluJo" FT repeat_region complement(2572316..2572368) FT /rpt_family="AluJo" FT repeat_region complement(2572375..2572425) FT /rpt_family="L1MB6" FT repeat_region complement(2572430..2572593) FT /rpt_family="AluSc" FT repeat_region complement(2572596..2572888) FT /rpt_family="AluJo" FT repeat_region complement(2572895..2572963) FT /rpt_family="L1MB6" FT repeat_region complement(2573022..2573320) FT /rpt_family="AluSx" FT misc_feature 2573469..2573520 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 61.000" FT repeat_region 2573533..2573860 FT /rpt_family="AluSx" FT repeat_region complement(2574294..2574866) FT /rpt_family="L1MB5" FT repeat_region complement(2575044..2575080) FT /rpt_family="(GAAA)n" FT repeat_region complement(2575081..2575371) FT /rpt_family="AluJo" FT repeat_region 2575482..2575601 FT /rpt_family="(CAGG)n" FT repeat_region 2575602..2575642 FT /rpt_family="(CA)n" FT repeat_region 2575644..2575765 FT /rpt_family="(CAGG)n" FT repeat_region 2575806..2575980 FT /rpt_family="(CA)n" FT repeat_region 2576021..2576139 FT /rpt_family="(CA)n" FT repeat_region complement(2576543..2576829) FT /rpt_family="AluJo" FT repeat_region complement(2576857..2576981) FT /rpt_family="FLAM_C" FT repeat_region complement(2577131..2577521) FT /rpt_family="MLT1E" FT repeat_region 2577556..2577718 FT /rpt_family="AluSg/x" FT repeat_region complement(2577838..2578134) FT /rpt_family="AluJb" FT repeat_region complement(2579778..2579858) FT /rpt_family="MLT1C" FT misc_feature 2645973..2646163 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 57.000" FT repeat_region 2646406..2646702 FT /rpt_family="AluSg" FT repeat_region complement(2646931..2647029) FT /rpt_family="MER81" FT repeat_region 2647537..2647733 FT /rpt_family="AluJo" FT repeat_region 2647744..2648045 FT /rpt_family="AluSx" FT repeat_region 2648054..2648182 FT /rpt_family="L1MC3" FT repeat_region 2648187..2648402 FT /rpt_family="AluJo" FT repeat_region 2648429..2648514 FT /rpt_family="L1MD3" FT repeat_region complement(2648885..2649040) FT /rpt_family="AluJo" FT repeat_region complement(2649092..2649234) FT /rpt_family="AluJo" FT repeat_region complement(2649396..2649685) FT /rpt_family="AluSg" FT repeat_region complement(2649704..2650171) FT /rpt_family="L1MB7" FT repeat_region complement(2650180..2650467) FT /rpt_family="AluSx" FT repeat_region complement(2651223..2651407) FT /rpt_family="(GGGA)n" FT repeat_region complement(2651408..2651563) FT /rpt_family="(GAAA)n" FT repeat_region complement(2651564..2651863) FT /rpt_family="AluSx" FT repeat_region 2651891..2652190 FT /rpt_family="AluSx" FT repeat_region 2652221..2652309 FT /rpt_family="L1MA7" FT repeat_region 2652337..2652637 FT /rpt_family="AluSx" FT repeat_region 2652650..2652736 FT /rpt_family="L1MA7" FT repeat_region 2652799..2653110 FT /rpt_family="AluJo" FT repeat_region complement(2653569..2653695) FT /rpt_family="MER20" FT repeat_region complement(2654330..2654520) FT /rpt_family="MER20" FT repeat_region complement(2654768..2654941) FT /rpt_family="MER20" FT repeat_region 2654942..2655203 FT /rpt_family="AluJo" FT repeat_region 2655219..2655428 FT /rpt_family="L1M3" FT repeat_region 2655429..2655554 FT /rpt_family="AluSg" FT repeat_region 2655555..2655856 FT /rpt_family="AluY" FT repeat_region 2655866..2656041 FT /rpt_family="AluSg" FT repeat_region 2656045..2656318 FT /rpt_family="L1M3" FT repeat_region 2656320..2656614 FT /rpt_family="AluSg" FT repeat_region complement(2656625..2656831) FT /rpt_family="MER58A" FT repeat_region 2657053..2657353 FT /rpt_family="AluJb" FT repeat_region complement(2657360..2657415) FT /rpt_family="(TA)n" FT repeat_region 2657567..2657692 FT /rpt_family="FLAM_A" FT repeat_region complement(2657699..2657749) FT /rpt_family="L1MC3" FT repeat_region 2657758..2657811 FT /rpt_family="LTR13" FT repeat_region 2657811..2658206 FT /rpt_family="LTR13" FT repeat_region complement(2658207..2658255) FT /rpt_family="L1MD3" FT repeat_region 2658449..2658706 FT /rpt_family="L1MB8" FT repeat_region 2658704..2658914 FT /rpt_family="L1MC2" FT repeat_region complement(2658971..2659266) FT /rpt_family="AluY" FT repeat_region 2659295..2659609 FT /rpt_family="AluSx" FT repeat_region 2659610..2659809 FT /rpt_family="(GGGA)n" FT repeat_region 2660487..2660805 FT /rpt_family="AluJo" FT repeat_region 2660806..2660926 FT /rpt_family="MLT1F" FT repeat_region 2660928..2661228 FT /rpt_family="AluSp" FT repeat_region 2661230..2661361 FT /rpt_family="(GAAA)n" FT repeat_region 2661373..2661689 FT /rpt_family="AluSx" FT repeat_region 2661690..2661728 FT /rpt_family="(GGAA)n" FT repeat_region 2661787..2661871 FT /rpt_family="MLT1F" FT repeat_region 2661976..2662277 FT /rpt_family="AluSx" FT repeat_region 2662279..2663004 FT /rpt_family="MER21B" FT repeat_region 2663038..2663127 FT /rpt_family="MLT1F" FT repeat_region 2663178..2663546 FT /rpt_family="MSTD" FT repeat_region complement(2663828..2664027) FT /rpt_family="MER20" FT misc_feature complement(2664377..2664490) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 53.000" FT repeat_region complement(2664751..2664958) FT /rpt_family="MER20" FT repeat_region complement(2665186..2665383) FT /rpt_family="MER20" FT repeat_region 2665644..2665792 FT /rpt_family="MIR" FT repeat_region complement(2665866..2666130) FT /rpt_family="AluSx" FT repeat_region complement(2666170..2666469) FT /rpt_family="AluSq" FT repeat_region complement(2666479..2666609) FT /rpt_family="FLAM_C" FT repeat_region 2666635..2666854 FT /rpt_family="MER58A" FT repeat_region 2667038..2667337 FT /rpt_family="AluSx" FT repeat_region 2667495..2667629 FT /rpt_family="AluJb" FT repeat_region 2667631..2667930 FT /rpt_family="AluSx" FT repeat_region 2667934..2668210 FT /rpt_family="L1MC3" FT repeat_region complement(2668800..2668970) FT /rpt_family="MER20" FT repeat_region complement(2668989..2669111) FT /rpt_family="MIR" FT repeat_region 2669208..2669505 FT /rpt_family="AluSg" FT repeat_region complement(2669537..2669724) FT /rpt_family="MER58A" FT repeat_region 2669726..2670027 FT /rpt_family="AluSx" FT repeat_region complement(2670620..2670841) FT /rpt_family="MER20" FT repeat_region complement(2671086..2671206) FT /rpt_family="MER20" FT repeat_region complement(2671759..2671794) FT /rpt_family="(TAAAA)n" FT repeat_region 2671804..2672067 FT /rpt_family="AluY" FT repeat_region complement(2672068..2672318) FT /rpt_family="AluSx" FT repeat_region complement(2672445..2672743) FT /rpt_family="AluSx" FT misc_feature 2672813..2672857 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 84.000" FT repeat_region 2672862..2672963 FT /rpt_family="L1MC3" FT repeat_region 2672973..2673275 FT /rpt_family="AluY" FT repeat_region 2673302..2673385 FT /rpt_family="L1MC3" FT repeat_region 2673409..2673711 FT /rpt_family="AluSx" FT repeat_region 2673899..2673938 FT /rpt_family="MLT1F" FT repeat_region 2673980..2674282 FT /rpt_family="AluSx" FT repeat_region complement(2674432..2674733) FT /rpt_family="AluSx" FT misc_feature 2674821..2674907 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 65.000" FT repeat_region 2675703..2675859 FT /rpt_family="MER20" FT repeat_region 2675898..2676288 FT /rpt_family="MLT1C" FT repeat_region complement(2676443..2676713) FT /rpt_family="AluJb" FT repeat_region 2677289..2677488 FT /rpt_family="MER20" FT repeat_region 2677728..2677933 FT /rpt_family="MER20" FT misc_feature 2678626..2678991 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 60.000" FT repeat_region complement(2679060..2679348) FT /rpt_family="AluJo" FT repeat_region complement(2679354..2679386) FT /rpt_family="AT_rich" FT repeat_region 2680030..2680143 FT /rpt_family="AluJo/FLAM" FT repeat_region complement(2680144..2680447) FT /rpt_family="AluSx" FT repeat_region complement(2680457..2680499) FT /rpt_family="AT_rich" FT repeat_region complement(2680571..2680806) FT /rpt_family="AluSp" FT repeat_region complement(2680811..2680929) FT /rpt_family="AluJb" FT repeat_region complement(2680949..2681059) FT /rpt_family="L1M4" FT repeat_region complement(2681083..2681160) FT /rpt_family="AluJb" FT repeat_region complement(2681180..2681480) FT /rpt_family="AluY" FT repeat_region complement(2681481..2681566) FT /rpt_family="AluJ/FLAM" FT repeat_region complement(2681573..2681892) FT /rpt_family="L1MC/D" FT repeat_region complement(2681909..2682206) FT /rpt_family="AluSx" FT repeat_region 2682382..2682673 FT /rpt_family="AluSg" FT misc_feature complement(2682724..2682829) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 52.000" FT repeat_region 2682949..2683254 FT /rpt_family="AluSg" FT repeat_region complement(2683295..2683388) FT /rpt_family="AluS" FT repeat_region 2684037..2684133 FT /rpt_family="AluS" FT repeat_region complement(2684134..2684432) FT /rpt_family="AluSg" FT repeat_region 2684438..2684698 FT /rpt_family="L1MB6" FT repeat_region 2684705..2684839 FT /rpt_family="AluSq/x" FT repeat_region 2684840..2685142 FT /rpt_family="AluSx" FT repeat_region 2685151..2685334 FT /rpt_family="L1MB2" FT repeat_region 2685340..2685639 FT /rpt_family="AluJo" FT repeat_region complement(2686159..2686455) FT /rpt_family="AluSx" FT repeat_region complement(2686748..2687049) FT /rpt_family="AluY" FT repeat_region complement(2687054..2687332) FT /rpt_family="AluJo" FT repeat_region 2687333..2687634 FT /rpt_family="AluSp" FT repeat_region complement(2687635..2687673) FT /rpt_family="AluJo" FT repeat_region 2687693..2687967 FT /rpt_family="AluSq" FT repeat_region 2687970..2688268 FT /rpt_family="AluY" FT repeat_region 2688385..2688763 FT /rpt_family="L1MC3" FT repeat_region 2688783..2689070 FT /rpt_family="AluJo" FT repeat_region 2689093..2689138 FT /rpt_family="MADE1" FT repeat_region 2689140..2689217 FT /rpt_family="POLY_A" FT repeat_region complement(2689255..2689277) FT /rpt_family="AT_rich" FT repeat_region 2689349..2689640 FT /rpt_family="AluSx" FT repeat_region 2689825..2690035 FT /rpt_family="MER58B" FT repeat_region 2690098..2690398 FT /rpt_family="AluSx" FT repeat_region 2690401..2690493 FT /rpt_family="MER58B" FT repeat_region complement(2690591..2690891) FT /rpt_family="AluSx" FT repeat_region 2690892..2691196 FT /rpt_family="L1MC1" FT repeat_region 2691260..2691563 FT /rpt_family="AluSx" FT repeat_region 2691584..2691883 FT /rpt_family="AluSx" FT repeat_region 2691888..2692149 FT /rpt_family="MLT1C" FT repeat_region 2692352..2692650 FT /rpt_family="AluY" FT repeat_region 2692707..2692996 FT /rpt_family="AluJo" FT repeat_region 2693008..2693132 FT /rpt_family="AluJb" FT repeat_region 2693135..2693432 FT /rpt_family="AluJo" FT repeat_region complement(2693567..2693763) FT /rpt_family="MER20" FT repeat_region 2694341..2694498 FT /rpt_family="MER20" FT repeat_region 2694760..2694905 FT /rpt_family="MER20" FT repeat_region 2694941..2695123 FT /rpt_family="AluJo" FT repeat_region 2695875..2696174 FT /rpt_family="AluSx" FT repeat_region 2696204..2696391 FT /rpt_family="(GAAA)n" FT repeat_region 2696393..2696451 FT /rpt_family="(GAAA)n" FT repeat_region 2696511..2696860 FT /rpt_family="L1MB6" FT repeat_region complement(2696861..2697117) FT /rpt_family="AluSx" FT repeat_region 2697671..2697980 FT /rpt_family="AluSx" FT repeat_region 2697983..2698274 FT /rpt_family="AluSx" FT repeat_region 2698280..2698581 FT /rpt_family="AluSx" FT misc_feature complement(2698975..2699043) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 69.000" FT repeat_region complement(2699146..2699446) FT /rpt_family="AluSx" FT repeat_region 2699649..2699825 FT /rpt_family="MER20" FT repeat_region 2700077..2700104 FT /rpt_family="(TAA)n" FT repeat_region complement(2700138..2700440) FT /rpt_family="AluSx" FT repeat_region complement(2702651..2702771) FT /rpt_family="GC_rich" FT repeat_region 2702795..2702907 FT /rpt_family="(CGGG)n" FT repeat_region complement(2703119..2703189) FT /rpt_family="MIR" FT repeat_region 2703245..2703318 FT /rpt_family="MER5A" FT repeat_region complement(2703325..2703622) FT /rpt_family="AluJb" FT repeat_region complement(2703631..2703742) FT /rpt_family="FLAM_C" FT repeat_region 2704114..2704408 FT /rpt_family="AluJo" FT repeat_region 2704416..2704734 FT /rpt_family="L1MA4A" FT repeat_region 2704760..2704839 FT /rpt_family="L1MA4A" FT repeat_region 2704844..2704951 FT /rpt_family="FLAM_C" FT repeat_region complement(2704975..2705248) FT /rpt_family="AluSp" FT repeat_region 2705254..2705547 FT /rpt_family="AluSp" FT repeat_region 2705548..2705712 FT /rpt_family="L1MA4A" FT repeat_region complement(2705839..2706140) FT /rpt_family="AluSq" FT repeat_region complement(2706185..2706434) FT /rpt_family="AluJo" FT repeat_region complement(2706451..2706599) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(2706695..2706872) FT /rpt_family="L1MD1" FT repeat_region 2706873..2707172 FT /rpt_family="AluSp" FT repeat_region complement(2707183..2707308) FT /rpt_family="L1MD2" FT repeat_region complement(2707316..2707612) FT /rpt_family="AluSx" FT repeat_region complement(2707615..2707794) FT /rpt_family="AluJ" FT repeat_region complement(2707796..2707900) FT /rpt_family="L1PA9" FT repeat_region complement(2707903..2708202) FT /rpt_family="AluSx" FT repeat_region complement(2708205..2708503) FT /rpt_family="L1ME1" FT repeat_region complement(2708515..2708634) FT /rpt_family="AluJ" FT repeat_region 2708905..2709201 FT /rpt_family="AluSc" FT repeat_region 2709206..2709380 FT /rpt_family="AluSg/x" FT repeat_region 2709548..2709832 FT /rpt_family="AluSx" FT repeat_region 2709926..2710066 FT /rpt_family="AluJo" FT repeat_region 2710067..2710365 FT /rpt_family="AluY" FT repeat_region 2710366..2710550 FT /rpt_family="AluJo" FT repeat_region 2710551..2710789 FT /rpt_family="L1MD3" FT repeat_region 2710811..2711081 FT /rpt_family="AluSx" FT misc_feature complement(2711568..2711675) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 61.000" FT repeat_region 2711811..2711898 FT /rpt_family="LINE2" FT repeat_region 2711913..2711959 FT /rpt_family="(TGAA)n" FT repeat_region 2712101..2712453 FT /rpt_family="MSTA" FT repeat_region complement(2712480..2712761) FT /rpt_family="AluSq" FT repeat_region 2712764..2712801 FT /rpt_family="MSTA" FT repeat_region complement(2713003..2713175) FT /rpt_family="(GGGA)n" FT repeat_region complement(2713230..2713351) FT /rpt_family="(GGA)n" FT repeat_region complement(2713444..2713605) FT /rpt_family="(TGGA)n" FT repeat_region complement(2713840..2713960) FT /rpt_family="(GGA)n" FT repeat_region complement(2714048..2714164) FT /rpt_family="(TGG)n" FT repeat_region complement(2714242..2714363) FT /rpt_family="(GGA)n" FT misc_feature 2714569..2714729 FT /note="BLASTN similarity to T17295 (1..161); match: 0.97, FT score: 3.2e-56; database searched: est; NIB652 Normalized FT infant brain, Bento Soares Homo sapiens cDNA 3'end." FT misc_feature 2714569..2714916 FT /note="BLASTN similarity to T17421 (1..348); match: 0.97, FT score: 1.1e-130; database searched: est; NIB886 Normalized FT infant brain, Bento Soares Homo sapiens cDNA 3'end." FT repeat_region 2715434..2715713 FT /rpt_family="MLT1E" FT repeat_region 2715968..2716062 FT /rpt_family="(CA)n" FT misc_feature complement(2716402..2716485) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 54.000" FT repeat_region 2717096..2717168 FT /rpt_family="(GGA)n" FT CDS complement(2717208..2717804) FT /codon_start=1 FT /product="BC41195_1 [Homo sapiens]" FT /note="Hypothetical protein similar to RAS-related FT proteins; Hypothetical protein 64% identical to FT hypothetical C. elegans protein encoded by ORF C54A12.4 FT (U28733)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD13119.1" FT /translation="MPEQSNDYRVVVFGAGGVGKSSLVLRFVKGTFRDTYIPTIEDTYR FT QVISCDKSVCTLQITDTTGSHQFPAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLI FT VQIKGSVEDIPVMLVGNKCDETQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQE FT LLTLETRRNMSLNIDGKRSGKQKRTDRVKGKCTLM" FT repeat_region complement(2717808..2717837) FT /rpt_family="GC_rich" FT repeat_region complement(2718522..2718822) FT /rpt_family="AluSp" FT repeat_region complement(2718823..2719117) FT /rpt_family="AluSx" FT misc_feature complement(2719405..2719447) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 58.000" FT repeat_region 2721019..2721298 FT /rpt_family="GC_rich" FT repeat_region complement(2721324..2721450) FT /rpt_family="(CGG)n" FT repeat_region 2721400..2721494 FT /rpt_family="SUBTEL_sat" FT repeat_region complement(2724401..2724527) FT /rpt_family="(TAGA)n" FT repeat_region complement(2724567..2724735) FT /rpt_family="FRAM" FT repeat_region 2724750..2725046 FT /rpt_family="AluSx" FT repeat_region 2725050..2725281 FT /rpt_family="AluYb8" FT repeat_region 2725297..2725591 FT /rpt_family="AluSg" FT repeat_region complement(2725592..2725631) FT /rpt_family="Alu" FT repeat_region complement(2725875..2726173) FT /rpt_family="AluSx" FT repeat_region 2726317..2726437 FT /rpt_family="LINE2" FT repeat_region 2726599..2726791 FT /rpt_family="MER20" FT repeat_region 2726802..2726889 FT /rpt_family="MER5A" FT misc_feature 2727430..2727573 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 91.000" FT misc_feature 2727831..2727950 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 56.000" FT repeat_region complement(2728230..2728529) FT /rpt_family="AluSx" FT repeat_region complement(2728717..2728919) FT /rpt_family="MER20" FT repeat_region 2729354..2729649 FT /rpt_family="AluSx" FT repeat_region 2729653..2729947 FT /rpt_family="AluSg" FT misc_feature 2732525..2732638 FT /note="BLASTN similarity to AI364241 (1..114); match: 0.99, FT score: 8.0e-38; database searched: month.na; qw36d12.x1 FT NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:1993175 3', mRNA FT sequence [Homo sapiens]" FT repeat_region 2732664..2732728 FT /rpt_family="GC_rich" FT misc_feature complement(2732749..2733483) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 84.000" FT misc_feature complement(2732773..2733195) FT /note="BLASTX similarity to 998569 (162..303); match: 0.39, FT score: 3.8e-19; database searched: nr; growth arrest FT inducible gene product [human, ectocervical epithelial FT cells, Peptide, 309 aa]" FT misc_feature complement(2733376..2733447) FT /note="BLASTX similarity to 998569 (101..124); match: 0.54, FT score: 3.8e-19; database searched: nr; growth arrest FT inducible gene product [human, ectocervical epithelial FT cells, Peptide, 309 aa]" FT misc_feature complement(2733399..2733483) FT /note="DDS similarity to overlapping ESTs:~(88685..88601) FT W03418 za04f12.r1 Soares melanocyte 2NbHM Homo sapiens cDNA FT clone 291599 5'; (368..452); 94% identity.~~(88685..88652) FT AA450159 zx42c08.r1 Soares total fetus Nb2HF8 9w Homo FT sapiens cDNA clone 789134 5'; (398..431); 100% identity." FT repeat_region 2733659..2733956 FT /rpt_family="AluSx" FT repeat_region complement(2733973..2734313) FT /rpt_family="MER54" FT repeat_region 2734385..2734476 FT /rpt_family="(CA)n" FT repeat_region 2734477..2734577 FT /rpt_family="MER20" FT misc_feature complement(2734524..2734962) FT /note="DDS similarity to AA535975 nf95a04.s1 NCI_CGAP_Co3 FT Homo sapiens cDNA clone IMAGE:927630 similar to contains FT MER20.t2 MER20 repetitive element ; (439..1); 100% FT identity.~" FT repeat_region complement(2734573..2734729) FT /rpt_family="MER20" FT repeat_region complement(2735365..2735591) FT /rpt_family="MLT1E" FT repeat_region 2736178..2736723 FT /rpt_family="MLT1E" FT misc_feature complement(2737046..2737377) FT /note="DDS similarity to overlapping ESTs:~W03418 FT za04f12.r1 Soares melanocyte 2NbHM Homo sapiens cDNA clone FT 291599 5'; (36..367); 100% identity.~~AA450159 zx42c08.r1 FT Soares total fetus Nb2HF8 9w Homo sapiens cDNA clone 789134 FT 5'; (66..397); 100% identity.~~AA535975 nf95a04.s1 FT NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:927630 similar FT to contains MER20.t2 MER20 repetitive element ; (518..440); FT 94% identity.~~Additional EST matches: R35388, Z46197" FT misc_feature complement(2737046..2737255) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 95.000" FT misc_feature complement(2737156..2737381) FT /note="BLASTN similarity to Z46197 (56..281); match: 0.99, FT score: 2.2e-86; database searched: est; H. sapiens partial FT cDNA sequence" FT repeat_region complement(2737414..2737704) FT /rpt_family="AluSg" FT repeat_region 2737705..2737868 FT /rpt_family="MLT2B" FT repeat_region 2737915..2738217 FT /rpt_family="AluSq" FT repeat_region complement(2738218..2738370) FT /rpt_family="MER3" FT repeat_region 2738450..2738623 FT /rpt_family="LINE2" FT repeat_region 2738626..2738948 FT /rpt_family="AluSx" FT repeat_region 2738949..2739117 FT /rpt_family="AluSg/x" FT repeat_region 2739565..2739682 FT /rpt_family="LINE2" FT repeat_region complement(2739781..2739844) FT /rpt_family="LINE2" FT repeat_region 2739881..2739917 FT /rpt_family="GC_rich" FT misc_feature complement(2739943..2739988) FT /note="DDS similarity to overlapping ESTs:~(95190..95145) FT R35388 yg64d12.r1 Homo sapiens cDNA clone 37610 5'; FT (1..46); 89% identity.~~(95170..95145) AA535975 nf95a04.s1 FT NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:927630 similar FT to contains MER20.t2 MER20 repetitive element ; (544..519); FT 98% identity.~" FT repeat_region 2740435..2740585 FT /rpt_family="L1MA7" FT repeat_region 2740598..2740728 FT /rpt_family="AluJo/FLAM" FT repeat_region complement(2740731..2741020) FT /rpt_family="AluSx" FT repeat_region 2741035..2741223 FT /rpt_family="MLT1E" FT repeat_region 2741192..2741334 FT /rpt_family="MLT1E" FT repeat_region 2741373..2741675 FT /rpt_family="AluSx" FT repeat_region 2741702..2741793 FT /rpt_family="MLT1E" FT repeat_region complement(2741798..2742066) FT /rpt_family="AluJo" FT repeat_region 2742071..2742119 FT /rpt_family="MLT1E" FT repeat_region 2742218..2742519 FT /rpt_family="AluSx" FT repeat_region complement(2742664..2742837) FT /rpt_family="LINE2" FT repeat_region 2742856..2742973 FT /rpt_family="FLAM_C" FT repeat_region complement(2742985..2743259) FT /rpt_family="LINE2" FT repeat_region complement(2743627..2743662) FT /rpt_family="AT_rich" FT repeat_region 2743666..2743788 FT /rpt_family="FLAM_C" FT repeat_region 2744064..2744378 FT /rpt_family="AluJo" FT repeat_region 2744406..2744680 FT /rpt_family="AluSq" FT repeat_region 2744690..2744969 FT /rpt_family="L1MC4" FT repeat_region 2744973..2745264 FT /rpt_family="AluSp" FT repeat_region complement(2745330..2745639) FT /rpt_family="AluSq" FT repeat_region complement(2745641..2745990) FT /rpt_family="L1MC3" FT repeat_region complement(2745998..2746324) FT /rpt_family="AluSx" FT repeat_region complement(2746327..2746457) FT /rpt_family="FLAM_A" FT repeat_region complement(2746553..2746849) FT /rpt_family="AluY" FT repeat_region complement(2746854..2747021) FT /rpt_family="L1ME" FT repeat_region 2747137..2747438 FT /rpt_family="AluSp" FT repeat_region 2747555..2747651 FT /rpt_family="L1ME3" FT repeat_region complement(2747771..2748062) FT /rpt_family="AluSq" FT repeat_region 2748133..2748267 FT /rpt_family="AluJo/FRAM" FT repeat_region 2748289..2748584 FT /rpt_family="AluJo" FT repeat_region 2748587..2748896 FT /rpt_family="AluSx" FT repeat_region 2748897..2748933 FT /rpt_family="AT_rich" FT repeat_region complement(2749483..2749779) FT /rpt_family="AluSx" FT repeat_region 2749780..2749807 FT /rpt_family="AT_rich" FT repeat_region complement(2749808..2750024) FT /rpt_family="AluSg/x" FT repeat_region 2750091..2750396 FT /rpt_family="AluSx" FT repeat_region 2750402..2750568 FT /rpt_family="AluJo" FT repeat_region complement(2750774..2750977) FT /rpt_family="MER20" FT repeat_region 2751580..2751652 FT /rpt_family="MER5A" FT repeat_region 2751653..2751952 FT /rpt_family="AluSx" FT repeat_region 2751957..2752257 FT /rpt_family="AluY" FT repeat_region complement(2752395..2752590) FT /rpt_family="AluJb" FT repeat_region complement(2752591..2752890) FT /rpt_family="AluSq" FT repeat_region complement(2752893..2752980) FT /rpt_family="MER5A" FT repeat_region complement(2753015..2753107) FT /rpt_family="MER20" FT repeat_region complement(2753595..2753899) FT /rpt_family="AluSx" FT repeat_region 2754111..2754405 FT /rpt_family="AluSp" FT mRNA complement(join(2754713..2757455,2757691..2757780, FT 2759255..2759292,2761458..2761520,2762504..2762642, FT 2763651..2763755,2765184..2765283,2767134..2767218, FT 2767578..2767684,2768967..2769091)) FT /product="Homo sapiens mRNA encoding small glutamine-rich FT tetratricopeptide repeat (TPR) containing protein" FT repeat_region 2756209..2756272 FT /rpt_family="POLY_A" FT repeat_region 2756345..2756469 FT /rpt_family="AluJb" FT CDS complement(join(2757341..2757455,2757691..2757780, FT 2759255..2759292,2761458..2761520,2762504..2762642, FT 2763651..2763755,2765184..2765283,2767134..2767218, FT 2767578..2767684,2768967..2769066)) FT /codon_start=1 FT /product="small glutamine-rich tetratricopeptide (SGT)" FT /protein_id="AAD13117.1" FT /translation="MDNKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGV FT TVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKV FT ENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYG FT RMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAPSPTGGVGSFDIA FT GLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDLASLIQAGQQFA FT QQMQQQNPELIEQLRSQIRSRTPSASNDDQQE" FT repeat_region 2757999..2758226 FT /rpt_family="MER20" FT repeat_region 2758245..2758534 FT /rpt_family="AluSx" FT repeat_region 2758554..2759212 FT /rpt_family="L1MB6" FT repeat_region 2759677..2759977 FT /rpt_family="AluSx" FT repeat_region 2760068..2760234 FT /rpt_family="MER58A" FT repeat_region 2760235..2760535 FT /rpt_family="AluSg" FT repeat_region 2760542..2760586 FT /rpt_family="MER58A" FT repeat_region 2761207..2761379 FT /rpt_family="MER20" FT repeat_region complement(2761919..2762233) FT /rpt_family="MER74" FT repeat_region complement(2763310..2763541) FT /rpt_family="MER21B" FT repeat_region 2763865..2763899 FT /rpt_family="MIR" FT repeat_region complement(2764394..2764569) FT /rpt_family="AluSq" FT repeat_region complement(2764572..2764864) FT /rpt_family="AluSx" FT repeat_region complement(2764866..2764979) FT /rpt_family="AluJo" FT repeat_region complement(2765879..2765933) FT /rpt_family="L1MB7" FT repeat_region 2765937..2766232 FT /rpt_family="AluSg" FT repeat_region complement(2766233..2766329) FT /rpt_family="L1MB7" FT repeat_region complement(2766428..2766733) FT /rpt_family="AluSq" FT repeat_region complement(2766742..2766961) FT /rpt_family="L1MB7" FT repeat_region complement(2769175..2769304) FT /rpt_family="MIR" FT repeat_region 2769413..2769536 FT /rpt_family="MER20" FT repeat_region 2770617..2770939 FT /rpt_family="MLT1C" FT repeat_region 2770982..2771040 FT /rpt_family="MIR" FT repeat_region 2771143..2771432 FT /rpt_family="AluSc" FT repeat_region 2771484..2771576 FT /rpt_family="MIR" FT repeat_region 2772532..2772799 FT /rpt_family="MLT1C" FT repeat_region 2773941..2774168 FT /rpt_family="MLT1C" FT repeat_region complement(2774699..2774779) FT /rpt_family="AluJ/FLAM" FT repeat_region complement(2774845..2774879) FT /rpt_family="(CA)n" FT repeat_region 2774952..2775039 FT /rpt_family="MER20" FT repeat_region 2775564..2775850 FT /rpt_family="L1MB7" FT repeat_region 2776254..2776684 FT /rpt_family="L1MB3" FT repeat_region 2776685..2776976 FT /rpt_family="AluSx" FT repeat_region 2776979..2777266 FT /rpt_family="AluSq" FT repeat_region 2777265..2777558 FT /rpt_family="AluJo" FT repeat_region 2777767..2778033 FT /rpt_family="AluSg" FT repeat_region 2778451..2778502 FT /rpt_family="LINE2" FT repeat_region 2778716..2778794 FT /rpt_family="FLAM_A" FT repeat_region 2779790..2780102 FT /rpt_family="AluJo" FT repeat_region 2780745..2780793 FT /rpt_family="MIR" FT repeat_region 2780803..2781083 FT /rpt_family="AluJb" FT repeat_region 2781342..2781555 FT /rpt_family="MER58A" FT repeat_region complement(2781559..2781711) FT /rpt_family="MIR" FT repeat_region complement(2781842..2782087) FT /rpt_family="AluSx" FT repeat_region complement(2782094..2782287) FT /rpt_family="MER20" FT repeat_region complement(2782477..2782592) FT /rpt_family="MIR" FT repeat_region complement(2782737..2782843) FT /rpt_family="MIR" FT repeat_region complement(2783277..2783310) FT /rpt_family="GC_rich" FT misc_feature 2783367..2783644 FT /note="BLASTN similarity to Z56885 (1..278); match: 0.98, FT score: 4.1e-103; database searched: nt; H.sapiens CpG DNA, FT clone 152a4, reverse read cpg152a4.rt1a ." FT repeat_region complement(2783655..2783710) FT /rpt_family="(TGAA)n" FT misc_feature complement(2783944..2784055) FT /note="BLASTN similarity to Z56884 (1..112); match: 0.98, FT score: 6.9e-36; database searched: nt; H.sapiens CpG DNA, FT clone 152a4, forward read cpg152a4.ft1a ." FT repeat_region 2784234..2784539 FT /rpt_family="AluSx" FT repeat_region 2784757..2784779 FT /rpt_family="POLY_A" FT repeat_region 2784783..2785075 FT /rpt_family="AluSc" FT repeat_region 2785487..2785532 FT /rpt_family="GC_rich" FT repeat_region 2785543..2785605 FT /rpt_family="(CGG)n" FT mRNA join(2785574..2785676,2790419..2790631,2794762..2794910, FT 2796079..2796186,2799687..2799789,2805014..2805174, FT 2806915..2807050,2807440..2807806,2808241..2808442, FT 2810302..2810488,2810638..2810766,2811596..2811732, FT 2813113..2813579) FT /product="Human thimet oligopeptidase (THOP1) mRNA, FT complete cds" FT CDS join(2785661..2785676,2790419..2790631,2794762..2794910, FT 2796079..2796186,2799687..2799789,2805014..2805174, FT 2806915..2807050,2807440..2807806,2808241..2808442, FT 2810302..2810488,2810638..2810766,2811596..2811732, FT 2813113..2813274) FT /codon_start=1 FT /product="MEPD_HUMAN" FT /function="METALLOPROTEASE" FT /function="HYDROLASE" FT /EC_number="3.4.24.15" FT /note="THIMET OLIGOPEPTIDASE; [FUNCTION] INVOLVED IN THE FT METABOLISM OF NEUROPEPTIDES UNDER 20 AMINO ACID RESIDUES FT LONG. INVOLVED IN CYTOPLASMIC PEPTIDE DEGRADATION. ABLE TO FT DEGRADE THE BETA-AMYLOID PRECURSOR PROTEIN AND GENERATE FT AMYLOIDOGENIC FRAGMENTS; ENDOPEPTIDASE 24.15; MP78" FT /protein_id="AAD13118.1" FT /translation="MKPPAACAGDMADAASPCSVVNDLRWDLSAQQIEERTRELIEQTK FT RVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHVSPSKDIRTASTEADKK FT LSEFDVEMSMREDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQEN FT IKRIKKKLSLLCIDFNKNLNEDTTFLPFTLQELGGLPEDFLNSLEKMEDGKLKVTLKYP FT HYFPLLKKCHVPETRRKVEEAFNCRCKEENCAILKELVTLRAQKSRLLGFHTHADYVLE FT MNMAKTSQTVATFLDELAQKLKPLGEQERAVILELKRAECERRGLPFDGRIRAWDMRYY FT MNQVEETRYCVDQNLLKEYFPVQVVTHGLLGIYQELLGLAFHHEEGASAWHEDVRLYTA FT RDAASGEVVGKFYLDLYPREGKYGHAACFGLQPGCLRQDGSRQIAIAAMVANFTKPTAD FT APSLLQHDEVETYFHEFGHVMHQLCSQAEFAMFSGTHVERDFVEAPSQMLENWVWEQEP FT LLRMSRHYRTGSAVPRELLEKLIESRQANTGLFNLRQIVLAKVDQALHTQTDADPAEEY FT ARLCQEILGVPATPGTNMPATFGHLAGGYDAQYYGYLWSEVYSMDMFHTRFKQEGVLNS FT KVGMDYRSCILRPGGSEDASAMLRRFLGRDPKQDAFLLSKGLQVGGCEPEPQVC" FT repeat_region complement(2786276..2786535) FT /rpt_family="AluJo" FT repeat_region complement(2786592..2786763) FT /rpt_family="AluSx" FT repeat_region complement(2786764..2787049) FT /rpt_family="AluY" FT repeat_region complement(2787051..2787196) FT /rpt_family="AluSx" FT repeat_region 2787351..2787397 FT /rpt_family="LINE2" FT repeat_region 2787693..2787902 FT /rpt_family="MER20" FT repeat_region complement(2788193..2788330) FT /rpt_family="MIR" FT repeat_region complement(2788486..2788776) FT /rpt_family="AluSq" FT repeat_region complement(2788778..2789058) FT /rpt_family="AluSx" FT repeat_region complement(2789103..2789177) FT /rpt_family="MER58A" FT repeat_region complement(2789751..2790050) FT /rpt_family="AluSg" FT repeat_region complement(2790058..2790229) FT /rpt_family="MER20" FT repeat_region 2791824..2791900 FT /rpt_family="LINE2" FT repeat_region complement(2792224..2792462) FT /rpt_family="AluJ" FT misc_feature complement(2792472..2792580) FT /note="BLASTN similarity to AQ352232 (1..109); match: 0.99, FT score: 5.7e-38; database searched: month.na; FT CITBI-E1-2537J8.TR CITBI-E1 Homo sapiens genomic clone FT 2537J8, genomic survey sequence [Homo sapiens]" FT repeat_region 2792613..2792640 FT /rpt_family="AT_rich" FT repeat_region complement(2792651..2792829) FT /rpt_family="AluJb" FT repeat_region complement(2792835..2792893) FT /rpt_family="L1MB8" FT repeat_region 2792894..2793193 FT /rpt_family="AluSp" FT repeat_region complement(2793200..2793406) FT /rpt_family="L1MB6" FT repeat_region 2793408..2793700 FT /rpt_family="AluSg" FT repeat_region complement(2793701..2793959) FT /rpt_family="L1MB6" FT repeat_region complement(2794011..2794311) FT /rpt_family="AluSx" FT repeat_region 2794596..2794674 FT /rpt_family="AluYa5" FT repeat_region complement(2794939..2795121) FT /rpt_family="AluSq" FT repeat_region complement(2795580..2795678) FT /rpt_family="FLAM_C" FT repeat_region complement(2795835..2796040) FT /rpt_family="L1MB6" FT repeat_region 2797092..2797263 FT /rpt_family="MER74" FT repeat_region 2797310..2797381 FT /rpt_family="MER74" FT repeat_region complement(2797406..2797750) FT /rpt_family="MER47A" FT repeat_region complement(2798029..2798323) FT /rpt_family="AluSx" FT repeat_region 2799043..2799329 FT /rpt_family="AluJb" FT repeat_region 2800164..2800193 FT /rpt_family="AT_rich" FT repeat_region complement(2800194..2800477) FT /rpt_family="AluSx" FT repeat_region complement(2801587..2801790) FT /rpt_family="MLT1A1" FT repeat_region complement(2801858..2801953) FT /rpt_family="MLT1A1" FT repeat_region complement(2802106..2802224) FT /rpt_family="(TGG)n" FT repeat_region complement(2802572..2802673) FT /rpt_family="MLT1A1" FT repeat_region complement(2802804..2802989) FT /rpt_family="L1MC4" FT repeat_region 2803295..2803489 FT /rpt_family="AluJo" FT repeat_region 2805843..2805973 FT /rpt_family="(CGGG)n" FT repeat_region complement(2807820..2807846) FT /rpt_family="GC_rich" FT repeat_region complement(2808605..2808908) FT /rpt_family="MLT1B" FT repeat_region 2808909..2809012 FT /rpt_family="AluSq/x" FT repeat_region 2809108..2809478 FT /rpt_family="MER82" FT repeat_region 2809539..2809584 FT /rpt_family="MER82" FT repeat_region 2814782..2815071 FT /rpt_family="AluJb" FT repeat_region 2817029..2817194 FT /rpt_family="AluSx" FT repeat_region complement(2817262..2817353) FT /rpt_family="LTR10A" FT repeat_region complement(2817463..2817727) FT /rpt_family="LTR10A" FT repeat_region 2818727..2819028 FT /rpt_family="AluY" FT repeat_region complement(2819029..2819095) FT /rpt_family="LTR10A" FT repeat_region 2819145..2819234 FT /rpt_family="AT_rich" FT repeat_region 2819235..2819534 FT /rpt_family="AluSq" FT repeat_region 2819927..2820214 FT /rpt_family="GC_rich" FT repeat_region 2820442..2820578 FT /rpt_family="MER20" FT repeat_region complement(2820683..2820955) FT /rpt_family="AluSx" FT repeat_region complement(2821089..2821354) FT /rpt_family="AluSx" FT repeat_region complement(2821385..2821658) FT /rpt_family="MLT1C" FT repeat_region complement(2821666..2821959) FT /rpt_family="AluSg" FT repeat_region complement(2822047..2822338) FT /rpt_family="AluSx" FT repeat_region 2936892..2937196 FT /rpt_family="AluJo" FT repeat_region 2937201..2937510 FT /rpt_family="AluSp" FT repeat_region complement(2937753..2938054) FT /rpt_family="AluSx" FT repeat_region 2938673..2938973 FT /rpt_family="AluY" FT misc_feature complement(2939274..2939405) FT /note="BLASTX similarity to P52737 (2..45); match: 0.72, FT score: 3.6e-13; database searched: nr; ZINC FINGER PROTEIN FT 136 pir||B57785 zinc finger protein ZNF136 - human FT >gi|487785 (U09367) zinc finger protein ZNF136 [Homo" FT misc_feature complement(2939277..2939399) FT /note="BLASTX similarity to Q13360 (14..54); match: 0.7, FT score: 2.8e-11; database searched: nr; ZINC FINGER PROTEIN FT 177 gi|1049301 (U37263) KRAB zinc finger protein, Method: FT conceptual translation supplied by author" FT repeat_region 2939698..2939993 FT /rpt_family="AluJo" FT repeat_region 2940057..2940164 FT /rpt_family="FLAM_C" FT repeat_region 2940240..2940375 FT /rpt_family="AluSq/x" FT repeat_region 2940391..2940689 FT /rpt_family="AluSc" FT repeat_region 2940892..2941192 FT /rpt_family="AluJb" FT repeat_region 2941194..2941491 FT /rpt_family="AluSx" FT misc_feature complement(2941867..2942036) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 61.000" FT repeat_region complement(2942068..2942366) FT /rpt_family="AluSg" FT repeat_region complement(2942371..2942553) FT /rpt_family="AluJo" FT repeat_region complement(2942816..2943079) FT /rpt_family="AluSq" FT repeat_region complement(2943705..2944007) FT /rpt_family="AluSx" FT misc_feature complement(2945335..2945519) FT /note="BLASTN similarity to cpg29c4.ft1a (4..188); match: FT 0.97, score: 1.3e-66; database searched: CpG; bases 117 to FT 304 (SL to QR)" FT repeat_region 2945531..2945827 FT /rpt_family="AluSq" FT repeat_region 2945839..2946062 FT /rpt_family="MER65A" FT repeat_region 2946063..2946280 FT /rpt_family="AluJb" FT repeat_region 2946282..2946396 FT /rpt_family="MER65A" FT repeat_region 2946676..2946975 FT /rpt_family="AluSx" FT repeat_region complement(2947228..2947340) FT /rpt_family="AluSx" FT repeat_region 2947565..2947866 FT /rpt_family="AluSp" FT repeat_region 2948280..2948578 FT /rpt_family="AluY" FT repeat_region 2948603..2948902 FT /rpt_family="AluSg" FT repeat_region 2949205..2949351 FT /rpt_family="MLT1B" FT repeat_region complement(2949347..2949505) FT /rpt_family="MER20" FT repeat_region complement(2949640..2949780) FT /rpt_family="MIR" FT repeat_region 2951253..2951385 FT /rpt_family="MER30" FT repeat_region complement(2951393..2951691) FT /rpt_family="AluY" FT repeat_region 2951692..2951790 FT /rpt_family="MER30" FT repeat_region 2952140..2952441 FT /rpt_family="AluSp" FT repeat_region complement(2952530..2952841) FT /rpt_family="AluSx" FT repeat_region 2952881..2952998 FT /rpt_family="AluSg/x" FT repeat_region complement(2953325..2953472) FT /rpt_family="LTR8" FT repeat_region complement(2953475..2953739) FT /rpt_family="AluSx" FT repeat_region 2953921..2954226 FT /rpt_family="AluSx" FT repeat_region 2954228..2954583 FT /rpt_family="MER41B" FT repeat_region 2954584..2954844 FT /rpt_family="AluSp" FT repeat_region complement(2954894..2955044) FT /rpt_family="LINE2" FT repeat_region 2955059..2955366 FT /rpt_family="AluSx" FT repeat_region 2955388..2955480 FT /rpt_family="MER2" FT repeat_region 2955482..2955779 FT /rpt_family="AluJb" FT repeat_region 2955785..2956083 FT /rpt_family="AluSq" FT repeat_region 2956098..2956221 FT /rpt_family="MER2" FT repeat_region complement(2956303..2956471) FT /rpt_family="FRAM" FT repeat_region complement(2956660..2956700) FT /rpt_family="(CAAAA)n" FT repeat_region complement(2956701..2957008) FT /rpt_family="AluSp" FT repeat_region 2957108..2957244 FT /rpt_family="L1MC4" FT repeat_region 2957249..2957415 FT /rpt_family="AluJo" FT repeat_region complement(2957416..2957528) FT /rpt_family="AluJ" FT repeat_region complement(2957533..2957831) FT /rpt_family="AluSg1" FT repeat_region complement(2957832..2957954) FT /rpt_family="AluJ" FT repeat_region 2958329..2958640 FT /rpt_family="AluSx" FT repeat_region complement(2958721..2958987) FT /rpt_family="L1MD2" FT repeat_region 2959161..2959350 FT /rpt_family="AluJo" FT repeat_region 2959352..2959403 FT /rpt_family="(GAAA)n" FT repeat_region 2959404..2959480 FT /rpt_family="(CAGG)n" FT repeat_region 2959481..2959782 FT /rpt_family="AluSq" FT repeat_region complement(2959783..2959894) FT /rpt_family="LINE2" FT repeat_region 2959902..2960091 FT /rpt_family="AluJo" FT repeat_region complement(2960214..2960382) FT /rpt_family="AluSg/x" FT repeat_region complement(2960383..2960685) FT /rpt_family="AluSx" FT repeat_region complement(2960686..2960829) FT /rpt_family="AluJb" FT repeat_region 2960860..2961158 FT /rpt_family="AluY" FT repeat_region 2961163..2961357 FT /rpt_family="MER5A" FT repeat_region 2961376..2961475 FT /rpt_family="FLAM_C" FT repeat_region 2961483..2961772 FT /rpt_family="AluSg" FT repeat_region complement(2961810..2962105) FT /rpt_family="AluY" FT repeat_region 2962107..2962232 FT /rpt_family="L1MA10" FT repeat_region complement(2962532..2962833) FT /rpt_family="AluSx" FT repeat_region complement(2962837..2963137) FT /rpt_family="AluSx" FT repeat_region complement(2963233..2963354) FT /rpt_family="FLAM_A" FT repeat_region 2963520..2963815 FT /rpt_family="AluSx" FT repeat_region 2963971..2964102 FT /rpt_family="AluSx" FT repeat_region 2964103..2964412 FT /rpt_family="AluY" FT repeat_region 2964413..2964589 FT /rpt_family="AluSx" FT repeat_region 2964695..2964920 FT /rpt_family="AluJo" FT repeat_region 2964946..2965097 FT /rpt_family="MLT1F" FT repeat_region complement(2965156..2965457) FT /rpt_family="AluSx" FT repeat_region 2965571..2965705 FT /rpt_family="MIR" FT repeat_region 2965768..2966062 FT /rpt_family="AluSc" FT repeat_region 2966063..2966101 FT /rpt_family="MER65A" FT repeat_region 2966102..2966123 FT /rpt_family="POLY_A" FT repeat_region 2966124..2966420 FT /rpt_family="AluY" FT repeat_region 2966426..2966726 FT /rpt_family="AluSq" FT repeat_region 2966738..2966822 FT /rpt_family="MER65A" FT repeat_region 2966824..2967129 FT /rpt_family="AluJo" FT repeat_region complement(2967169..2967324) FT /rpt_family="AluY" FT repeat_region complement(2967325..2967624) FT /rpt_family="AluY" FT repeat_region complement(2967625..2967760) FT /rpt_family="AluY" FT repeat_region complement(2967830..2968131) FT /rpt_family="AluSx" FT repeat_region 2968133..2968338 FT /rpt_family="MER65A" FT repeat_region 2968356..2968476 FT /rpt_family="MLT1C" FT repeat_region 2968478..2968614 FT /rpt_family="AluJb" FT repeat_region 2968616..2968910 FT /rpt_family="AluSc" FT repeat_region 2968911..2968954 FT /rpt_family="MLT1C" FT repeat_region complement(2968980..2969089) FT /rpt_family="AluSg/x" FT repeat_region 2969099..2969408 FT /rpt_family="MLT1C" FT repeat_region 2969560..2969860 FT /rpt_family="AluSg" FT repeat_region 2969898..2970200 FT /rpt_family="AluSq" FT repeat_region 2970353..2970634 FT /rpt_family="AluJo" FT repeat_region 2970638..2970945 FT /rpt_family="AluSx" FT repeat_region 2970949..2971252 FT /rpt_family="AluSx" FT repeat_region complement(2971427..2971701) FT /rpt_family="AluSq" FT repeat_region complement(2971706..2971995) FT /rpt_family="AluJb" FT repeat_region 2972319..2972633 FT /rpt_family="AluSg" FT repeat_region 2972653..2972954 FT /rpt_family="AluJo" FT repeat_region 2972956..2973246 FT /rpt_family="AluSx" FT repeat_region 2973325..2973528 FT /rpt_family="MER3" FT repeat_region 2973647..2973947 FT /rpt_family="AluSx" FT repeat_region 2973950..2974248 FT /rpt_family="AluSg" FT repeat_region 2974711..2974851 FT /rpt_family="FLAM_C" FT repeat_region complement(2974910..2974944) FT /rpt_family="(GGAA)n" FT repeat_region complement(2974946..2975172) FT /rpt_family="AluSq" FT repeat_region complement(2975446..2975640) FT /rpt_family="AluSx" FT repeat_region complement(2975643..2975931) FT /rpt_family="AluY" FT repeat_region complement(2975941..2976051) FT /rpt_family="AluSx" FT repeat_region complement(2976058..2976167) FT /rpt_family="LINE2" FT repeat_region complement(2976213..2976255) FT /rpt_family="(TA)n" FT repeat_region complement(2976256..2976533) FT /rpt_family="AluJo" FT misc_feature 2976555..2976674 FT /note="BLASTN similarity to Z57824 (137..256); match: 0.99, FT score: 2.7e-40; database searched: nt; H.sapiens CpG DNA, FT clone 198b12, reverse read cpg198b12.rt1a ." FT misc_feature complement(2976779..2976991) FT /note="BLASTN similarity to Z57823 (1..213); match: 1, FT score: 1.0e-79; database searched: nt; H.sapiens CpG DNA, FT clone 198b12, forward read cpg198b12.ft1a ." FT misc_feature 2976852..2976936 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 57.000" FT repeat_region 2978466..2978760 FT /rpt_family="AluJo" FT repeat_region complement(2978957..2979191) FT /rpt_family="AluSg" FT CDS join(<2976853..2976936,2982146..2982187,2986827..2986889, FT 2986981..2987202,2989156..2989311,2989533..2989783, FT 2991841..2991982,2993430..2993580,2994017..2994093, FT 2994898..2995002) FT /codon_start=1 FT /product="R26610_1" FT /note="Hypothetical groucho-related gene product; FT Hypothetical protein exhibits 52% identity to Mus musculus FT groucho-related gene product (AF145957) over 298 residues, FT and 36% identity to TLE2_HUMAN (Q04725) over 292 residues. FT CDS constructed from combination of Xgrail predictions and FT EST alignments" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD38076.1" FT /translation="AFVTGLEEQLGKFGDKCIARGWDHQGDPLHKIQQDVAEHHKQIGN FT VLQIVESCSQLQGFQSEEVSPAEPASPGTPQQVKDKTLQESSFEDIMATRSSDWLRRPL FT GEDNQPETQLFWDKEPWFWHDTLTEQLWRIFAGMRILAHGELVLATAISSFTRHVFTCG FT RRGIKVWSLTGQVAEDRFPESHLPIQTPGAFLRTCLLSSNSRSLLTGGYNLASVSVWDL FT AAPSLHVKEQLPCAGLNCQALDANLDANLAFASFTSGVVRIWDLRDQSVVRDLKGYPDG FT VKSIVVKGYNIWTGGPDACLRCWDQRTIMKPLEYQFKSQIMSLSHSPQEDWVLLGMANG FT QQWLQSTSGSQRHMVGQKDSVILSVKFSPFGQWWASVGMDDFLGVYSMPAGTKVFEVPE FT MSPVTCCDVSSNNRLVVTGSGEHASVYQITY" FT repeat_region complement(2978957..2979249) FT /rpt_family="AluSg" FT repeat_region complement(2979268..2979542) FT /rpt_family="AluSq" FT repeat_region complement(2979545..2979565) FT /rpt_family="AT_rich" FT repeat_region 2979657..2979978 FT /rpt_family="AluSg" FT repeat_region complement(2979979..2980011) FT /rpt_family="MADE1" FT repeat_region 2980452..2980755 FT /rpt_family="AluSx" FT repeat_region 2980767..2981068 FT /rpt_family="AluJo" FT repeat_region 2981072..2981364 FT /rpt_family="AluSq" FT repeat_region 2981688..2981977 FT /rpt_family="AluSx" FT repeat_region complement(2982039..2982096) FT /rpt_family="MIR" FT repeat_region 2982254..2982553 FT /rpt_family="AluSx" FT repeat_region complement(2982556..2982696) FT /rpt_family="LINE2" FT repeat_region complement(2983199..2983833) FT /rpt_family="LINE2" FT repeat_region complement(2984468..2984765) FT /rpt_family="AluSx" FT repeat_region 2984967..2985261 FT /rpt_family="AluSx" FT repeat_region complement(2985399..2985716) FT /rpt_family="AluY" FT repeat_region 2985792..2986089 FT /rpt_family="AluSx" FT repeat_region 2986129..2986420 FT /rpt_family="AluJb" FT repeat_region 2986430..2986721 FT /rpt_family="AluSx" FT repeat_region 2988313..2988602 FT /rpt_family="AluY" FT repeat_region 2989994..2990110 FT /rpt_family="MIR" FT repeat_region 2990115..2990211 FT /rpt_family="AluJ/FLAM" FT repeat_region complement(2990223..2990318) FT /rpt_family="AT_rich" FT repeat_region 2990319..2990619 FT /rpt_family="AluY" FT repeat_region 2990620..2990709 FT /rpt_family="(TA)n" FT repeat_region 2990719..2991001 FT /rpt_family="AluSx" FT repeat_region 2991005..2991079 FT /rpt_family="(CATA)n" FT repeat_region 2991080..2991370 FT /rpt_family="AluSx" FT repeat_region complement(2991371..2991474) FT /rpt_family="(TA)n" FT repeat_region 2992052..2992188 FT /rpt_family="AluSq/x" FT repeat_region 2992190..2992479 FT /rpt_family="AluSp" FT repeat_region 2992487..2992791 FT /rpt_family="AluJb" FT repeat_region 2992905..2993216 FT /rpt_family="AluSx" FT repeat_region complement(2993252..2993327) FT /rpt_family="MIR" FT misc_feature 2993521..2993580 FT /note="DDS similarity to AA975026 on59f01.s1 FT Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1560985 FT 3' similar to SW:TLE2_HUMAN Q04725 TRANSDUCIN-LIKE ENHANCER FT PROTEIN 2 ; (415..356); 100% identity." FT repeat_region 2993832..2993938 FT /rpt_family="AluJb" FT misc_feature 2994017..2994093 FT /note="DDS similarity to AA975026 on59f01.s1 FT Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1560985 FT 3' similar to SW:TLE2_HUMAN Q04725 TRANSDUCIN-LIKE ENHANCER FT PROTEIN 2 ; (355..279); 100% identity." FT repeat_region 2994087..2994192 FT /rpt_family="AluJo" FT repeat_region 2994193..2994326 FT /rpt_family="AluJo" FT repeat_region 2994328..2994621 FT /rpt_family="AluY" FT repeat_region 2994642..2994800 FT /rpt_family="AluJo" FT misc_feature 2994898..2995002 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 90.000~~(18383..18661) FT DDS similarity to AA975026 on59f01.s1 Soares_NFL_T_GBC_S1 FT Homo sapiens cDNA clone IMAGE:1560985 3' similar to FT SW:TLE2_HUMAN Q04725 TRANSDUCIN-LIKE ENHANCER PROTEIN 2 ; FT (278..1); 99% identity." FT repeat_region complement(2995293..2995460) FT /rpt_family="FRAM" FT repeat_region 2995482..2995746 FT /rpt_family="AluSp" FT repeat_region complement(2995747..2995872) FT /rpt_family="AluJo/FLAM" FT repeat_region complement(2995873..2995953) FT /rpt_family="AluJ/FLAM" FT repeat_region 2996144..2996328 FT /rpt_family="MER20" FT repeat_region complement(2996598..2996722) FT /rpt_family="FLAM_C" FT repeat_region 2997046..2997331 FT /rpt_family="AluSx" FT mRNA complement(join(2997637..2997953,3000645..3000721, FT 3002351..3002501,3005435..3005582,3005719..3005966, FT 3006418..3006667,3008867..3008943,3009540..3009700, FT 3011020..3011158,3013667..3013816,3014568..3014612, FT 3015651..>3015758)) FT /gene="TLE2" FT /product="Homo sapiens transducin-like enhancer of split 2, FT homolog of Drosophila E(sp1) (TLE2) mRNA" FT CDS complement(join(2997846..2997953,3000645..3000721, FT 3002351..3002501,3005435..3005582,3005719..3005966, FT 3006418..3006667,3008867..3008943,3009540..3009700, FT 3011020..3011158,3013667..3013816,3014568..3014612, FT 3015651..>3015758)) FT /codon_start=1 FT /gene="TLE2" FT /product="TLE2_HUMAN [AA 191-743]" FT /note="TRANSDUCIN-LIKE ENHANCER PROTEIN 2; ESG2" FT /protein_id="AAD38075.1" FT /translation="SASPSPPESLVEEERPSGPGGGGKQRADEKEPSGPYESDEDKSDY FT NLVVDEDQPSEPPSPATTPCGKVPICIPARRDLVDSPASLASSLGSPLPRAKELILNDL FT PASTPASKSCDSSPPQDASTPGPSSASHLCQLAAKPAPSTDSVALRSPLTLSSPFTTSF FT SLGSHSTLNGDLSVPSSYVSLHLSPQVSSSVVYGRSPVMAFESHPHLRGSSVSSSLPSI FT PGGKPAYSFHVSADGQMQPVPFPSDALVGAGIPRHARQLHTLAHGEVVCAVTISGSTQH FT VYTGGKGCVKVWDVGQPGAKTPVAQLDCLNRDNYIRSCKLLPDGRSLIVGGEASTLSIW FT DLAAPTPRIKAELTSSAPACYALAVSPDAKVCFSCCSDGNIVVWDLQNQTMVRQFQGHT FT DGASCIDISDYGTRLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGHCPNQDWLAVG FT MESSNVEILHVRKPEKYQLHLHESCVLSLKFASCGRWFVSTGKDNLLNAWRTPYGASIF FT QSKESSSVLSCDISRNNKYIVTGSGDKKATVYEVVY" FT repeat_region complement(2998075..2998244) FT /rpt_family="AluSq" FT repeat_region complement(2998245..2998274) FT /rpt_family="(CA)n" FT repeat_region complement(2998277..2998575) FT /rpt_family="AluSx" FT repeat_region complement(2998576..2998709) FT /rpt_family="AluSq" FT repeat_region 2998894..2998943 FT /rpt_family="MER58B" FT repeat_region 2999027..2999294 FT /rpt_family="AluSx" FT repeat_region 2999333..2999433 FT /rpt_family="L1M4" FT repeat_region 2999444..2999744 FT /rpt_family="AluY" FT repeat_region 2999750..3000047 FT /rpt_family="AluSx" FT repeat_region complement(3000069..3000371) FT /rpt_family="AluY" FT repeat_region complement(3000376..3000401) FT /rpt_family="AT_rich" FT repeat_region complement(3000823..3000991) FT /rpt_family="AluJo" FT repeat_region 3000992..3001285 FT /rpt_family="AluSx" FT repeat_region complement(3001286..3001412) FT /rpt_family="AluJo" FT repeat_region complement(3001488..3001771) FT /rpt_family="AluJo" FT repeat_region complement(3001793..3002095) FT /rpt_family="AluSq" FT repeat_region complement(3002096..3002166) FT /rpt_family="MER53" FT repeat_region complement(3002167..3002244) FT /rpt_family="MER53" FT repeat_region complement(3002540..3002692) FT /rpt_family="AluJb" FT repeat_region complement(3002700..3002986) FT /rpt_family="AluSx" FT repeat_region 3003354..3003655 FT /rpt_family="AluSx" FT repeat_region complement(3003708..3004004) FT /rpt_family="AluJb" FT repeat_region 3004356..3004631 FT /rpt_family="AluSx" FT repeat_region complement(3006781..3007082) FT /rpt_family="AluSx" FT repeat_region complement(3007090..3007387) FT /rpt_family="AluSx" FT repeat_region complement(3007407..3007547) FT /rpt_family="AluJo" FT repeat_region complement(3007729..3007793) FT /rpt_family="MER3" FT repeat_region 3007802..3008099 FT /rpt_family="AluSx" FT repeat_region complement(3008109..3008230) FT /rpt_family="MER3" FT repeat_region complement(3008219..3008411) FT /rpt_family="MER20" FT repeat_region complement(3008447..3008748) FT /rpt_family="AluSx" FT repeat_region complement(3009215..3009282) FT /rpt_family="MER58A" FT repeat_region complement(3009882..3010022) FT /rpt_family="AluSc" FT repeat_region 3010082..3010382 FT /rpt_family="AluSp" FT repeat_region complement(3010629..3010761) FT /rpt_family="MIR" FT repeat_region 3011244..3011544 FT /rpt_family="AluSx" FT repeat_region 3011566..3011865 FT /rpt_family="AluSq" FT repeat_region 3011964..3012270 FT /rpt_family="AluSx" FT repeat_region complement(3012272..3012514) FT /rpt_family="AluJb" FT repeat_region 3013930..3013984 FT /rpt_family="MIR" FT repeat_region complement(3013987..3014217) FT /rpt_family="AluSx" FT repeat_region complement(3014288..3014359) FT /rpt_family="MIR" FT repeat_region 3014971..3015086 FT /rpt_family="(TAAA)n" FT repeat_region complement(3015308..3015341) FT /rpt_family="LINE2" FT repeat_region complement(3015935..3016232) FT /rpt_family="AluSx" FT repeat_region 3016292..3016353 FT /rpt_family="AluY" FT repeat_region complement(3050308..3050605) FT /rpt_family="AluSx" FT repeat_region complement(3050617..3050688) FT /rpt_family="L1M1" FT repeat_region 3050732..3051039 FT /rpt_family="AluY" FT repeat_region 3051565..3051693 FT /rpt_family="AluJb" FT repeat_region 3051701..3051757 FT /rpt_family="(TA)n" FT repeat_region 3051758..3051939 FT /rpt_family="AluJb" FT repeat_region complement(3052074..3052095) FT /rpt_family="AT_rich" FT repeat_region complement(3052096..3052182) FT /rpt_family="FLAM_A" FT repeat_region complement(3052347..3052508) FT /rpt_family="AluSg/x" FT repeat_region complement(3052509..3052806) FT /rpt_family="AluSq" FT repeat_region complement(3053123..3053146) FT /rpt_family="AT_rich" FT mRNA complement(join(3053160..3054038,3054118..3054192, FT 3055662..3055724,3056310..3056354,3057677..3057740, FT 3061158..3061255,3062172..3062227)) FT /product="Human homolog of Drosophila enhancer of split FT m9/m10 mRNA, complete cds." FT mRNA complement(join(3053173..3054038,3054118..3054192, FT 3055662..3055724,3056310..3056354,3057677..3057740, FT 3061158..3061255,3062172..3062274)) FT /product="Homo sapiens gp130 associated protein GAM mRNA, FT complete cds" FT mRNA complement(join(3053452..3054038,3054118..3054192, FT 3055662..3055724,3056310..3056354,3057677..3057740, FT 3061158..3061255,3062172..3062192)) FT /product="H.sapiens hAES-1 mRNA" FT CDS complement(join(3053817..3054038,3054118..3054192, FT 3055662..3055724,3056310..3056354,3057677..3057740, FT 3061158..3061255,3062172..3062198)) FT /codon_start=1 FT /gene="AES" FT /product="GRG_HUMAN" FT /note="GRG PROTEIN; ESP1 PROTEIN; AMINO ENHANCER OF SPLIT; FT AES-1/AES-2; gp130 associated protein GAM" FT /protein_id="AAC72103.1" FT /translation="MMFPQSRHSGSSHLPQQLKFTTSDSCDRIKDEFQLLQAQYHSLKL FT ECDKLASEKSEMQRHYVMYYEMSYGLNIEMHKQAEIVKRLNGICAQVLPYLSQEHQQQV FT LGAIERAKQVTAPELNSIIRQQLQAHQLSQLQALALPLTPLPVGLQPPSLPAVSAGTGL FT LSLSALGSQAHLSKEDKNGHDGDTHQEDDGEKSD" FT repeat_region 3056239..3056299 FT /rpt_family="(GGA)n" FT repeat_region 3056361..3056526 FT /rpt_family="(GA)n" FT repeat_region 3056813..3056901 FT /rpt_family="LINE2" FT repeat_region complement(3057884..3058008) FT /rpt_family="FLAM_C" FT repeat_region complement(3058275..3058390) FT /rpt_family="MIR" FT repeat_region 3058879..3059072 FT /rpt_family="MIR" FT repeat_region 3059238..3059538 FT /rpt_family="AluSx" FT repeat_region complement(3060331..3060629) FT /rpt_family="AluSq" FT repeat_region 3060917..3060998 FT /rpt_family="MIR" FT misc_feature complement(3061158..3061256) FT /gene="AES" FT /note="BLASTN similarity to AI185676 (77..175); match: 1, FT score: 4.2e-60; database searched: month.na; qe60e08.x1 FT Soares_fetal_lung_NbHL19W Homo sapiens cDNA clone FT IMAGE:1743398 3' similar to gb:M99436 FT TRANSDUCIN-LIKE~~BLASTN similarity to AI205641 (76..150); FT match: 0.97, score: 5.5e-49; database searched: month.na; FT qf83h10.x1 Soares_fetal_lung_NbHL19W Homo sapiens cDNA FT clone IMAGE:1756675 3' similar to gb:M99436 FT TRANSDUCIN-LIKE" FT repeat_region 3061384..3061486 FT /rpt_family="GC_rich" FT repeat_region 3061885..3062069 FT /rpt_family="POLY_G" FT repeat_region complement(3062087..3062167) FT /rpt_family="GC_rich" FT misc_feature complement(3062171..3062247) FT /note="BLASTN similarity to AI205641 (1..77); match: 1, FT score: 5.5e-49; database searched: month.na; qf83h10.x1 FT Soares_fetal_lung_NbHL19W Homo sapiens cDNA clone FT IMAGE:1756675 3' similar to gb:M99436 FT TRANSDUCIN-LIKE~~BLASTN similarity to AI185676 (3..78); FT match: 1, score: 4.2e-60; database searched: month.na; FT qe60e08.x1 Soares_fetal_lung_NbHL19W Homo sapiens cDNA FT clone IMAGE:1743398 3' similar to gb:M99436 FT TRANSDUCIN-LIKE" FT repeat_region complement(3062205..3062279) FT /rpt_family="GC_rich" FT repeat_region complement(3062312..3062464) FT /rpt_family="(CGGG)n" FT repeat_region complement(3062533..3062587) FT /rpt_family="GC_rich" FT repeat_region complement(3062600..3062715) FT /rpt_family="(CGGG)n" FT repeat_region 3062799..3062900 FT /rpt_family="MIR" FT repeat_region complement(3062922..3063310) FT /rpt_family="LINE2" FT repeat_region complement(3063343..3063478) FT /rpt_family="MER45" FT repeat_region complement(3063485..3063590) FT /rpt_family="LINE2" FT repeat_region complement(3063601..3063879) FT /rpt_family="AluSp" FT repeat_region complement(3063882..3064175) FT /rpt_family="AluSx" FT repeat_region complement(3064178..3064292) FT /rpt_family="LINE2" FT repeat_region complement(3064530..3064554) FT /rpt_family="AT_rich" FT repeat_region complement(3064555..3064845) FT /rpt_family="AluY" FT repeat_region complement(3064854..3065022) FT /rpt_family="AluJo" FT repeat_region 3065024..3065321 FT /rpt_family="AluSg" FT repeat_region 3065376..3065677 FT /rpt_family="AluSp" FT repeat_region 3066237..3066535 FT /rpt_family="AluSx" FT repeat_region complement(3066551..3066669) FT /rpt_family="MIR" FT repeat_region 3066778..3066838 FT /rpt_family="AluS" FT repeat_region complement(3066898..3067194) FT /rpt_family="AluJb" FT repeat_region 3067234..3067531 FT /rpt_family="AluSp" FT repeat_region complement(3067605..3067797) FT /rpt_family="MER20" FT repeat_region complement(3068502..3068589) FT /rpt_family="LINE2" FT repeat_region complement(3068619..3068922) FT /rpt_family="AluSq" FT repeat_region 3069054..3069356 FT /rpt_family="AluJb" FT repeat_region 3069357..3069650 FT /rpt_family="AluY" FT repeat_region complement(3069732..3070033) FT /rpt_family="AluY" FT repeat_region complement(3070038..3070190) FT /rpt_family="AluSg/x" FT repeat_region 3070358..3070533 FT /rpt_family="LINE2" FT repeat_region complement(3070779..3071078) FT /rpt_family="AluY" FT repeat_region complement(3071137..3071204) FT /rpt_family="(TAAAA)n" FT repeat_region complement(3071209..3071503) FT /rpt_family="AluSx" FT repeat_region complement(3071555..3071780) FT /rpt_family="AluJo" FT repeat_region complement(3071784..3071967) FT /rpt_family="AluJo" FT repeat_region 3071973..3072047 FT /rpt_family="LINE2" FT repeat_region complement(3072106..3072287) FT /rpt_family="AluSx" FT repeat_region complement(3072288..3072586) FT /rpt_family="AluSc" FT repeat_region complement(3072588..3072721) FT /rpt_family="AluSx" FT repeat_region complement(3072735..3072779) FT /rpt_family="MIR" FT repeat_region 3072971..3073075 FT /rpt_family="LINE2" FT repeat_region complement(3073505..3073810) FT /rpt_family="AluSc" FT repeat_region complement(3073861..3074073) FT /rpt_family="AluJo" FT repeat_region complement(3074649..3074956) FT /rpt_family="AluJo" FT repeat_region complement(3074971..3075261) FT /rpt_family="AluSx" FT repeat_region 3075478..3075681 FT /rpt_family="MER20" FT repeat_region 3075765..3075870 FT /rpt_family="AluJo/FRAM" FT repeat_region 3075881..3075916 FT /rpt_family="(TAGA)n" FT repeat_region complement(3075916..3076051) FT /rpt_family="MER3" FT repeat_region 3076082..3076121 FT /rpt_family="GC_rich" FT repeat_region complement(3076258..3076303) FT /rpt_family="LINE2" FT repeat_region complement(3076342..3076533) FT /rpt_family="MER20" FT repeat_region complement(3076763..3076975) FT /rpt_family="MER20" FT repeat_region complement(3076984..3077284) FT /rpt_family="AluY" FT repeat_region complement(3077341..3077643) FT /rpt_family="AluSq" FT repeat_region 3077683..3077984 FT /rpt_family="AluY" FT repeat_region 3077985..3078099 FT /rpt_family="(GAAA)n" FT repeat_region complement(3078150..3078326) FT /rpt_family="AluSq" FT repeat_region complement(3078510..3078530) FT /rpt_family="AT_rich" FT repeat_region 3078596..3078899 FT /rpt_family="AluSq" FT repeat_region 3078907..3079071 FT /rpt_family="AluJb" FT repeat_region complement(3079138..3079412) FT /rpt_family="AluSx" FT repeat_region complement(3079415..3079601) FT /rpt_family="AluJo" FT repeat_region complement(3079670..3079924) FT /rpt_family="LINE2" FT repeat_region 3079937..3080239 FT /rpt_family="AluSx" FT repeat_region complement(3080760..3080910) FT /rpt_family="FRAM" FT repeat_region complement(3080948..3081172) FT /rpt_family="AluSx" FT repeat_region complement(3081176..3081464) FT /rpt_family="AluSq" FT repeat_region complement(3081472..3081635) FT /rpt_family="MIR" FT repeat_region complement(3081736..3081838) FT /rpt_family="MER66A" FT repeat_region complement(3081839..3082140) FT /rpt_family="AluSx" FT repeat_region complement(3082144..3082441) FT /rpt_family="AluJo" FT repeat_region complement(3082481..3082556) FT /rpt_family="MIR" FT repeat_region complement(3082639..3082711) FT /rpt_family="L1MC/D" FT repeat_region complement(3082712..3082774) FT /rpt_family="(TAAA)n" FT repeat_region complement(3082775..3083074) FT /rpt_family="AluSc" FT repeat_region complement(3083075..3083200) FT /rpt_family="AluSq/x" FT repeat_region complement(3083222..3083515) FT /rpt_family="AluSp" FT repeat_region 3083546..3083836 FT /rpt_family="AluY" FT repeat_region complement(3083837..3083931) FT /rpt_family="L1ME" FT repeat_region complement(3083933..3084235) FT /rpt_family="AluJo" FT repeat_region complement(3084243..3084531) FT /rpt_family="AluSx" FT repeat_region complement(3084550..3084846) FT /rpt_family="AluSx" FT misc_feature 3085028..3085177 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 65.000" FT repeat_region complement(3085396..3085694) FT /rpt_family="AluSp" FT repeat_region complement(3085697..3085760) FT /rpt_family="(GAAAA)n" FT repeat_region complement(3085762..3086063) FT /rpt_family="AluSx" FT repeat_region complement(3086064..3086244) FT /rpt_family="AluJo" FT repeat_region complement(3086249..3086549) FT /rpt_family="AluY" FT repeat_region complement(3086550..3086686) FT /rpt_family="AluJo" FT repeat_region complement(3086775..3087078) FT /rpt_family="AluY" FT repeat_region 3087106..3087404 FT /rpt_family="AluSg" FT repeat_region 3087420..3087720 FT /rpt_family="AluSx" FT repeat_region 3087761..3087810 FT /rpt_family="LINE2" FT repeat_region 3087871..3088128 FT /rpt_family="AluJo" FT repeat_region 3088129..3088428 FT /rpt_family="AluSp" FT repeat_region 3088430..3088463 FT /rpt_family="(GAAA)n" FT repeat_region complement(3088672..3088964) FT /rpt_family="AluY" FT repeat_region complement(3088969..3089100) FT /rpt_family="AluJo" FT repeat_region 3089270..3089562 FT /rpt_family="AluSx" FT repeat_region 3089800..3089827 FT /rpt_family="MIR" FT repeat_region complement(3089904..3090032) FT /rpt_family="FLAM_C" FT repeat_region complement(3090045..3090202) FT /rpt_family="AluJo" FT repeat_region complement(3090302..3090543) FT /rpt_family="AluSx" FT repeat_region complement(3090557..3090678) FT /rpt_family="AluJo" FT repeat_region complement(3090713..3090766) FT /rpt_family="LINE2" FT repeat_region 3090768..3090989 FT /rpt_family="MER58B" FT repeat_region 3090990..3091051 FT /rpt_family="Alu" FT repeat_region complement(3094021..3094083) FT /rpt_family="GC_rich" FT repeat_region complement(3094140..3094179) FT /rpt_family="GC_rich" FT repeat_region complement(3094202..3094334) FT /rpt_family="(CGGG)n" FT repeat_region 3094381..3094512 FT /rpt_family="(CGG)n" FT repeat_region 3094507..3094640 FT /rpt_family="(CGGG)n" FT mRNA 3094530..3121542 FT /product="Human guanine nucleotide-binding regulatory FT protein (G-y-alpha) mRNA" FT gene 3094650..3121177 FT /map="19p13.3" FT /gene="GNA11" FT /note="Human guanine nucleotide-binding regulatory protein FT (G-y-alpha)" FT CDS join(3094650..3094785,3110147..3110331,3113328..3113482, FT 3114942..3115070,3118922..3119051,3119204..3119357, FT 3120987..3121177) FT /codon_start=1 FT /gene="GNA11" FT /product="GB11_HUMAN" FT /note="guanine nucleotide-binding regulatory protein; FT GUANINE NUCLEOTIDE-BINDING PROTEIN G(Y),ALPHA SUBUNIT; FT ALPHA-11" FT /protein_id="AAC25615.1" FT /translation="MTLESMMACCLSDEVKESKRINAEIEKQLRRDKRDARRELKLLLL FT GTGESGKSTFIKQMRIIHGAGYSEEDKRGFTKLVYQNIFTAMQAMIRAMETLKILYKYE FT QNKANALLIREVDVEKVTTFEHQYVSAIKTLWEDPGIQECYDRRREYQLSDSAKYYLTD FT VDRIATLGYLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFEN FT VTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLED FT KILYSHLVDYFPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFV FT FAAVKDTILQLNLKEYNLV" FT repeat_region complement(3097795..3097981) FT /rpt_family="MER20" FT repeat_region complement(3100160..3100340) FT /rpt_family="MER20" FT repeat_region 3100753..3100851 FT /rpt_family="MIR" FT repeat_region 3101810..3102115 FT /rpt_family="AluSx" FT repeat_region 3102574..3102683 FT /rpt_family="MIR" FT repeat_region complement(3103210..3103510) FT /rpt_family="AluSx" FT repeat_region complement(3103529..3103693) FT /rpt_family="AluSx" FT repeat_region complement(3103694..3103982) FT /rpt_family="AluY" FT repeat_region complement(3103983..3104116) FT /rpt_family="AluSx" FT repeat_region complement(3104651..3104745) FT /rpt_family="LINE2" FT repeat_region complement(3105275..3105665) FT /rpt_family="MLT1A1" FT repeat_region complement(3105716..3105850) FT /rpt_family="L1MD1" FT repeat_region complement(3106696..3106830) FT /rpt_family="(CATG)n" FT repeat_region 3106953..3107249 FT /rpt_family="AluSx" FT repeat_region complement(3108646..3109108) FT /rpt_family="MLT1F" FT repeat_region complement(3110795..3111091) FT /rpt_family="AluJb" FT repeat_region complement(3111157..3111789) FT /rpt_family="L1MB8" FT repeat_region complement(3112020..3112135) FT /rpt_family="MER58A" FT repeat_region 3115121..3115422 FT /rpt_family="AluJo" FT repeat_region complement(3116334..3116649) FT /rpt_family="MLT1C" FT repeat_region 3116969..3117043 FT /rpt_family="MLT1C" FT repeat_region complement(3117385..3117679) FT /rpt_family="AluY" FT repeat_region 3121453..3121500 FT /rpt_family="POLY_A" FT repeat_region complement(3121835..3121856) FT /rpt_family="AT_rich" FT repeat_region complement(3122303..3122337) FT /rpt_family="GC_rich" FT repeat_region complement(3122472..3122498) FT /rpt_family="GC_rich" FT misc_feature 3123344..3123595 FT /note="BLASTN similarity to T49255 (1..252); match: 0.96, FT score: 2.5e-68; database searched: est; ya73f10.r1 Homo FT sapiens cDNA clone 67339 5'." FT misc_feature complement(3123789..3124000) FT /note="BLASTN similarity to T06575 (5..215); match: 0.99, FT score: 6.5e-79; database searched: est; EST04464 Homo FT sapiens cDNA clone HFBDV36.~~BLASTN similarity to T30789 FT (1..212); match: 0.99, score: 2.5e-79; database searched: FT est; EST22657 Homo sapiens cDNA 5' end similar to None.." FT repeat_region complement(3124438..3124946) FT /rpt_family="L1MB3" FT repeat_region complement(3124947..3125244) FT /rpt_family="AluSc" FT repeat_region complement(3125245..3125345) FT /rpt_family="L1MB3" FT repeat_region complement(3125528..3125829) FT /rpt_family="AluSx" FT repeat_region complement(3125846..3126214) FT /rpt_family="LINE2" FT repeat_region 3126526..3126592 FT /rpt_family="MER45" FT repeat_region 3126600..3126899 FT /rpt_family="AluSx" FT repeat_region 3126951..3127239 FT /rpt_family="AluSx" FT repeat_region 3127243..3127540 FT /rpt_family="AluY" FT repeat_region 3127580..3127943 FT /rpt_family="L1MB8" FT repeat_region complement(3127967..3128267) FT /rpt_family="AluSx" FT repeat_region 3128297..3128721 FT /rpt_family="L1" FT repeat_region 3128729..3128993 FT /rpt_family="AluY" FT repeat_region 3129002..3129518 FT /rpt_family="L1" FT repeat_region 3129542..3129845 FT /rpt_family="AluSq" FT repeat_region 3129863..3130075 FT /rpt_family="L1MD2" FT repeat_region 3130076..3130199 FT /rpt_family="AluJb" FT repeat_region 3130200..3130502 FT /rpt_family="AluSx" FT repeat_region 3130527..3130656 FT /rpt_family="AluJb" FT rRNA 3130713..3130841 FT /product="Human 60S ribosomal RNA L35" FT repeat_region 3130850..3131154 FT /rpt_family="AluY" FT misc_feature 3131170..3131300 FT /note="BLASTN similarity to T35425 (155..286); match: 0.96, FT score: 1.5e-37; database searched: est; EST84949 Homo FT sapiens cDNA 5' end similar to similar to ribosomal protein FT L35." FT repeat_region 3131414..3131503 FT /rpt_family="(CAAA)n" FT repeat_region 3131512..3131605 FT /rpt_family="L1MD2" FT repeat_region 3131610..3131909 FT /rpt_family="AluY" FT repeat_region 3131910..3131985 FT /rpt_family="(TAAA)n" FT repeat_region complement(3131993..3132192) FT /rpt_family="AluJo" FT repeat_region 3132194..3132289 FT /rpt_family="AluSp/q" FT repeat_region 3132291..3132319 FT /rpt_family="(GAAA)n" FT repeat_region complement(3132320..3132435) FT /rpt_family="AluJo" FT repeat_region 3132443..3132568 FT /rpt_family="L1ME3A" FT repeat_region complement(3132575..3132874) FT /rpt_family="AluSx" FT misc_feature 3133154..3133376 FT /note="BLASTN similarity to cpg14d1.ft1a (1..224); match: FT 0.97, score: 6.6e-78; database searched: Sanger CpG; bases FT 105 to 328 (SL to QR)" FT misc_feature 3133154..3133405 FT /note="BLASTN similarity to cpg14d1.ft1b (1..255); match: FT 0.99, score: 2.2e-81; database searched: Sanger CpG; bases FT 106 to 360 (SL to QR)" FT repeat_region 3133637..3133694 FT /rpt_family="MIR" FT misc_feature complement(3133793..3134084) FT /note="BLASTN similarity to cpg14d1.rt1b (9..300); match: FT 0.98, score: 6.2e-113; database searched: Sanger CpG; bases FT 77 to 376 (SL to QR)" FT misc_feature complement(3133902..3134091) FT /note="BLASTN similarity to cpg14d1.rt1a (1..191); match: FT 0.97, score: 1.3e-65; database searched: Sanger CpG; bases FT 74 to 264 (SL to QR)" FT repeat_region 3134134..3134231 FT /rpt_family="(TA)n" FT repeat_region complement(3134236..3134381) FT /rpt_family="(CATA)n" FT repeat_region complement(3134421..3134715) FT /rpt_family="AluSx" FT repeat_region complement(3134737..3135035) FT /rpt_family="AluSc" FT repeat_region 3135109..3135161 FT /rpt_family="LINE2" FT repeat_region 3135195..3135350 FT /rpt_family="MIR" FT repeat_region complement(3135362..3135458) FT /rpt_family="AluSq/x" FT repeat_region 3135546..3135842 FT /rpt_family="AluSq" FT repeat_region complement(3135843..3135941) FT /rpt_family="(TA)n" FT mRNA 3136230..>3136593 FT /product="Human G-alpha 16 protein mRNA" FT gene 3136449..>3136593 FT /gene="GNA15" FT /note="Human guanine nucleotide binding protein alpha 15" FT CDS 3136449..>3136593 FT /codon_start=1 FT /gene="GNA15" FT /product="GB15_HUMAN" FT /note="GUANINE NUCLEOTIDE-BINDING PROTEIN, ALPHA-15 FT SUBUNIT, PARTIAL CDS; GTP binding protein alpha 15; FT ALPHA-16" FT /protein_id="AAC25616.1" FT /translation="MARSLTWRCCPWCLTEDEKAAARVDQEINRILLEQKKQDRGELKL FT LLL" FT repeat_region complement(3136741..3136798) FT /rpt_family="MIR" FT repeat_region complement(3137078..3137136) FT /rpt_family="(TGAA)n" FT repeat_region 3137363..3137561 FT /rpt_family="AluSx" FT mRNA 3136230..3163017 FT /product="Human G-alpha 16 protein mRNA" FT gene 3136449..3163017 FT /map="19p13.3" FT /gene="GNA15" FT /note="Guanine nucleotide binding protein (G protein) alpha FT 15 (Gq class)" FT CDS join(3136449..3136593,3148589..3148773,3150129..3150283, FT 3151705..3151833,3155821..3155950,3157726..3157879, FT 3162791..3163017) FT /codon_start=1 FT /gene="GNA15" FT /product="GNA15" FT /note="GUANINE NUCLEOTIDE-BINDING PROTEIN, ALPHA-15 FT SUBUNIT; ALPHA-16" FT /protein_id="AAC25612.1" FT /translation="MARSLTWRCCPWCLTEDEKAAARVDQEINRILLEQKKQDRGELKL FT LLLGPGESGKSTFIKQMRIIHGAGYSEEERKGFRPLVYQNIFVSMRAMIEAMERLQIPF FT SRPESKHHASLVMSQDPYKVTTFEKRYAAAMQWLWRDAGIRAYYERRREFHLLDSAVYY FT LSHLERITEEGYVPTAQDVLRSRMPTTGINEYCFSVQKTNLRIVDVGGQKSERKKWIHC FT FENVIALIYLASLSEYDQCLEENNQENRMKESLALFGTILELPWFKSTSVILFLNKTDI FT LEEKIPTSHLATYFPSFQGPKQDAEAAKRFILDMYTRMYTGCVDGPEGSKKGARSRRLF FT SHYTCATDTQNIRKVFKDVRDSVLARYLDEINLL" FT repeat_region 3137501..3137797 FT /rpt_family="AluSc" FT repeat_region 3137799..3137978 FT /rpt_family="AluSx" FT repeat_region 3137996..3138277 FT /rpt_family="AluSq" FT repeat_region complement(3138628..3138935) FT /rpt_family="AluSg" FT repeat_region complement(3138942..3139243) FT /rpt_family="AluSx" FT repeat_region 3139304..3139615 FT /rpt_family="AluJo" FT repeat_region 3139617..3139751 FT /rpt_family="AluY" FT repeat_region 3139752..3140043 FT /rpt_family="AluSq" FT repeat_region complement(3140044..3140084) FT /rpt_family="(TAGA)n" FT misc_feature complement(3140091..3140204) FT /gene="GNA15" FT /note="BLASTN similarity to L13117 (1..114); match: 1, FT score: 6.8e-39; database searched: nt; Human tandem repeat FT polymorphism." FT repeat_region 3140404..3140738 FT /rpt_family="LINE2" FT repeat_region 3140741..3140769 FT /rpt_family="(TGAA)n" FT repeat_region 3141173..3141304 FT /rpt_family="FLAM_A" FT repeat_region complement(3141394..3141694) FT /rpt_family="AluSx" FT repeat_region complement(3141702..3141789) FT /rpt_family="MIR" FT repeat_region 3142587..3142887 FT /rpt_family="AluSx" FT repeat_region 3143136..3143217 FT /rpt_family="MIR" FT repeat_region 3143378..3143670 FT /rpt_family="AluSx" FT repeat_region 3143678..3143831 FT /rpt_family="MIR" FT repeat_region 3143837..3144142 FT /rpt_family="AluY" FT repeat_region complement(3144501..3144525) FT /rpt_family="(TAAA)n" FT repeat_region complement(3144527..3144825) FT /rpt_family="AluY" FT repeat_region complement(3144827..3145150) FT /rpt_family="AluSg" FT repeat_region complement(3145162..3145489) FT /rpt_family="AluJo" FT repeat_region complement(3145495..3145544) FT /rpt_family="L1MC4" FT repeat_region complement(3145546..3145845) FT /rpt_family="AluSx" FT repeat_region complement(3146293..3146335) FT /rpt_family="MIR" FT repeat_region 3146577..3147130 FT /rpt_family="LINE2" FT repeat_region complement(3147224..3147268) FT /rpt_family="AT_rich" FT repeat_region 3147269..3147566 FT /rpt_family="AluSx" FT repeat_region 3147623..3147905 FT /rpt_family="AluY" FT repeat_region complement(3148087..3148385) FT /rpt_family="AluSx" FT repeat_region complement(3148397..3148499) FT /rpt_family="MIR" FT repeat_region 3148940..3149079 FT /rpt_family="(CATA)n" FT repeat_region 3149080..3149181 FT /rpt_family="(CA)n" FT repeat_region 3149190..3149303 FT /rpt_family="(CA)n" FT repeat_region complement(3149308..3149440) FT /rpt_family="(CATG)n" FT repeat_region 3149496..3149614 FT /rpt_family="(CA)n" FT repeat_region 3149749..3149801 FT /rpt_family="MIR" FT repeat_region complement(3152616..3152710) FT /rpt_family="LINE2" FT repeat_region 3153009..3153084 FT /rpt_family="MER51A" FT repeat_region 3153090..3153194 FT /rpt_family="LTR12" FT repeat_region 3153271..3153382 FT /rpt_family="(TGGA)n" FT repeat_region 3153385..3153503 FT /rpt_family="(TGGA)n" FT repeat_region 3153552..3153661 FT /rpt_family="(TGAG)n" FT repeat_region 3153663..3153699 FT /rpt_family="(TGGA)n" FT repeat_region 3153700..3153933 FT /rpt_family="(TGAA)n" FT repeat_region 3153934..3153978 FT /rpt_family="(TGGA)n" FT repeat_region 3153981..3154098 FT /rpt_family="(TGGA)n" FT repeat_region 3154127..3154305 FT /rpt_family="(TGGA)n" FT repeat_region 3154302..3154433 FT /rpt_family="(TGAG)n" FT repeat_region 3154434..3154543 FT /rpt_family="(TGGA)n" FT repeat_region 3154575..3154693 FT /rpt_family="(TGGA)n" FT repeat_region complement(3155442..3155515) FT /rpt_family="MIR" FT repeat_region 3155595..3155675 FT /rpt_family="MIR" FT repeat_region 3156159..3156226 FT /rpt_family="(CA)n" FT repeat_region 3156227..3156370 FT /rpt_family="(CATG)n" FT repeat_region 3156388..3156528 FT /rpt_family="(CA)n" FT repeat_region complement(3156529..3156793) FT /rpt_family="AluY" FT repeat_region complement(3156794..3156977) FT /rpt_family="MLT1C" FT repeat_region complement(3156994..3157296) FT /rpt_family="AluSq" FT repeat_region complement(3157302..3157396) FT /rpt_family="MLT1B" FT repeat_region 3157397..3157444 FT /rpt_family="Alu" FT repeat_region complement(3157453..3157534) FT /rpt_family="MLT1B" FT repeat_region complement(3158147..3158449) FT /rpt_family="AluSc" FT repeat_region complement(3158618..3158930) FT /rpt_family="AluSx" FT repeat_region complement(3159021..3159321) FT /rpt_family="AluY" FT repeat_region complement(3159342..3159640) FT /rpt_family="AluSp" FT repeat_region complement(3160021..3160159) FT /rpt_family="MLT1G" FT repeat_region complement(3160245..3160356) FT /rpt_family="(GA)n" FT repeat_region complement(3160633..3160933) FT /rpt_family="MLT1C" FT repeat_region complement(3160939..3161251) FT /rpt_family="AluJb" FT repeat_region complement(3161252..3161358) FT /rpt_family="MLT1C" FT repeat_region 3161783..3162049 FT /rpt_family="AluSx" FT repeat_region 3162155..3162399 FT /rpt_family="AluSq" FT repeat_region complement(3164082..3164167) FT /rpt_family="MIR" FT repeat_region complement(3164198..3164363) FT /rpt_family="AluSq" FT repeat_region complement(3164365..3164658) FT /rpt_family="AluSx" FT repeat_region complement(3164660..3164833) FT /rpt_family="MLT1C" FT repeat_region 3164846..3165022 FT /rpt_family="AluSg/x" FT repeat_region complement(3165026..3165047) FT /rpt_family="AT_rich" FT repeat_region complement(3165048..3165168) FT /rpt_family="L1MC3" FT repeat_region complement(3165169..3165468) FT /rpt_family="AluY" FT repeat_region complement(3165477..3165758) FT /rpt_family="L1MD3" FT repeat_region complement(3166010..3166311) FT /rpt_family="AluY" FT repeat_region complement(3166315..3166617) FT /rpt_family="AluSq" FT repeat_region complement(3166651..3166782) FT /rpt_family="L1MC4" FT repeat_region complement(3166810..3167177) FT /rpt_family="L1PA6" FT repeat_region complement(3167178..3167478) FT /rpt_family="AluY" FT repeat_region complement(3167479..3167542) FT /rpt_family="L1PA6" FT repeat_region complement(3167646..3167836) FT /rpt_family="MER58A" FT repeat_region complement(3167849..3168010) FT /rpt_family="FRAM" FT repeat_region complement(3168032..3168089) FT /rpt_family="L1M4" FT repeat_region complement(3168110..3168440) FT /rpt_family="L1MC4" FT repeat_region complement(3168441..3168619) FT /rpt_family="AluSg/x" FT repeat_region complement(3168629..3168928) FT /rpt_family="AluSg" FT repeat_region complement(3168999..3169196) FT /rpt_family="AluSq" FT repeat_region complement(3169197..3169431) FT /rpt_family="AluJb" FT repeat_region complement(3169445..3169655) FT /rpt_family="L1MC4" FT repeat_region complement(3169666..3169836) FT /rpt_family="AluSg/x" FT repeat_region complement(3169837..3170078) FT /rpt_family="AluSg" FT misc_feature 3210391..3210486 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 57.000" FT repeat_region complement(3210561..3210917) FT /rpt_family="LINE2" FT repeat_region complement(3211769..3211801) FT /rpt_family="Alu" FT repeat_region 3211803..3212095 FT /rpt_family="AluSx" FT repeat_region complement(3212382..3212561) FT /rpt_family="LINE2" FT repeat_region complement(3212632..3212919) FT /rpt_family="AluSx" FT repeat_region complement(3212925..3213188) FT /rpt_family="AluSx" FT repeat_region complement(3213235..3213400) FT /rpt_family="LINE2" FT repeat_region 3213569..3213865 FT /rpt_family="AluSg" FT repeat_region complement(3214153..3214282) FT /rpt_family="FLAM_C" FT repeat_region complement(3214308..3214491) FT /rpt_family="AluSq" FT repeat_region complement(3214492..3214789) FT /rpt_family="AluSg" FT repeat_region complement(3214790..3214923) FT /rpt_family="AluSq" FT misc_feature 3214968..3215128 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 71.000" FT repeat_region complement(3215251..3215430) FT /rpt_family="AluSg/x" FT repeat_region complement(3215448..3215744) FT /rpt_family="AluJb" FT repeat_region complement(3215766..3216063) FT /rpt_family="AluY" FT repeat_region 3216128..3216162 FT /rpt_family="L1MB3" FT repeat_region 3216168..3216292 FT /rpt_family="AluSx" FT repeat_region 3216293..3216597 FT /rpt_family="AluY" FT repeat_region 3216602..3216766 FT /rpt_family="AluSx" FT repeat_region 3216769..3216836 FT /rpt_family="L1MB3" FT repeat_region 3216956..3217409 FT /rpt_family="L1MB3" FT repeat_region 3217415..3217711 FT /rpt_family="AluSx" FT repeat_region 3217721..3218017 FT /rpt_family="AluJo" FT repeat_region complement(3218058..3218080) FT /rpt_family="AT_rich" FT repeat_region 3218081..3218377 FT /rpt_family="AluSx" FT repeat_region 3218877..3219177 FT /rpt_family="AluY" FT repeat_region complement(3219242..3219541) FT /rpt_family="AluSx" FT repeat_region complement(3219936..3220226) FT /rpt_family="AluJo" FT repeat_region complement(3220227..3220519) FT /rpt_family="AluY" FT repeat_region complement(3220526..3220643) FT /rpt_family="AluSq/x" FT repeat_region complement(3221052..3221348) FT /rpt_family="AluSx" FT repeat_region 3221422..3221539 FT /rpt_family="MIR" FT repeat_region complement(3221551..3221701) FT /rpt_family="L1MB7" FT repeat_region 3221716..3222018 FT /rpt_family="AluJo" FT repeat_region 3222025..3222194 FT /rpt_family="AluSg/x" FT repeat_region 3222213..3222513 FT /rpt_family="AluSx" FT repeat_region 3222545..3222707 FT /rpt_family="AluSg/x" FT repeat_region complement(3222824..3223055) FT /rpt_family="LINE2" FT repeat_region complement(3223072..3223240) FT /rpt_family="AluJb" FT repeat_region complement(3223241..3223543) FT /rpt_family="AluSp" FT repeat_region complement(3223546..3223677) FT /rpt_family="AluJb" FT repeat_region complement(3223982..3224288) FT /rpt_family="AluSq" FT repeat_region complement(3224517..3224594) FT /rpt_family="GC_rich" FT repeat_region 3224613..3224672 FT /rpt_family="(CGGG)n" FT repeat_region complement(3224665..3224743) FT /rpt_family="(CGG)n" FT repeat_region complement(3224791..3224846) FT /rpt_family="GC_rich" FT misc_feature complement(3224849..3224976) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 83.000" FT CDS 3224852..>3224996 FT /codon_start=1 FT /product="R31341_2" FT /note="Hypothetical partial RNP-like protein; Partial CDS FT 81% identical to gi|606976 (U16800) ribonucleoprotein FT [Xenopus laevis]" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC27666.1" FT /translation="MKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTG FT MHK" FT repeat_region complement(3225009..3225162) FT /rpt_family="(GGGA)n" FT repeat_region complement(3225198..3225368) FT /rpt_family="(GA)n" FT repeat_region complement(3225640..3225671) FT /rpt_family="GC_rich" FT misc_feature complement(3225727..3225891) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 92.000" FT repeat_region 3226237..3226301 FT /rpt_family="(TGAA)n" FT repeat_region 3226439..3226474 FT /rpt_family="(CA)n" FT repeat_region complement(3226755..3226791) FT /rpt_family="(GAA)n" FT repeat_region 3227257..3227297 FT /rpt_family="MIR" FT repeat_region 3228106..3228221 FT /rpt_family="(GA)n" FT repeat_region complement(3228614..3228653) FT /rpt_family="GC_rich" FT repeat_region complement(3228872..3228930) FT /rpt_family="(CA)n" FT repeat_region complement(3229237..3229325) FT /rpt_family="LINE2" FT repeat_region complement(3230073..3230118) FT /rpt_family="(TGAA)n" FT repeat_region complement(3230362..3230442) FT /rpt_family="LINE2" FT repeat_region complement(3230498..3230643) FT /rpt_family="LINE2" FT repeat_region 3231172..3231209 FT /rpt_family="LINE2" FT repeat_region 3231292..3231444 FT /rpt_family="(TGGA)n" FT repeat_region 3231446..3231626 FT /rpt_family="(TGGA)n" FT repeat_region 3231627..3231743 FT /rpt_family="(TGGA)n" FT repeat_region 3231789..3232013 FT /rpt_family="(TGAA)n" FT repeat_region 3232108..3232267 FT /rpt_family="MIR" FT repeat_region 3232271..3232568 FT /rpt_family="AluJo" FT repeat_region 3232658..3232784 FT /rpt_family="AluJ" FT repeat_region 3232791..3233092 FT /rpt_family="AluSp" FT repeat_region 3233097..3233128 FT /rpt_family="(TAAA)n" FT repeat_region 3233133..3233304 FT /rpt_family="AluJ" FT repeat_region complement(3233383..3233813) FT /rpt_family="LINE2" FT repeat_region complement(3233848..3233881) FT /rpt_family="MIR" FT repeat_region complement(3234272..3234396) FT /rpt_family="FLAM_C" FT repeat_region 3234402..3234599 FT /rpt_family="MER20" FT repeat_region 3234683..3235478 FT /rpt_family="LINE2" FT repeat_region 3235486..3235579 FT /rpt_family="(TGGA)n" FT repeat_region 3235581..3235860 FT /rpt_family="(TGGA)n" FT repeat_region 3235861..3235930 FT /rpt_family="(TGGA)n" FT repeat_region complement(3236354..3236438) FT /rpt_family="MIR" FT repeat_region 3236701..3237006 FT /rpt_family="AluSx" FT repeat_region 3237029..3237329 FT /rpt_family="AluY" FT repeat_region complement(3237330..3237758) FT /rpt_family="MER41B" FT repeat_region 3237766..3238059 FT /rpt_family="AluY" FT repeat_region 3238070..3238242 FT /rpt_family="AluSq" FT repeat_region complement(3238245..3238290) FT /rpt_family="MER41B" FT repeat_region complement(3238390..3238643) FT /rpt_family="MLT1C" FT repeat_region 3238648..3238944 FT /rpt_family="AluSq" FT repeat_region complement(3238949..3239068) FT /rpt_family="MLT1C" FT repeat_region complement(3239079..3239102) FT /rpt_family="AT_rich" FT repeat_region complement(3239103..3239395) FT /rpt_family="AluJo" FT repeat_region complement(3239399..3239584) FT /rpt_family="AluJo" FT repeat_region 3239790..3239919 FT /rpt_family="LINE2" FT repeat_region complement(3240008..3240314) FT /rpt_family="AluSx" FT repeat_region complement(3240322..3240625) FT /rpt_family="AluSx" FT repeat_region complement(3241061..3241378) FT /rpt_family="AluSc" FT misc_feature 3241462..3241559 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 97.000" FT repeat_region complement(3241774..3242072) FT /rpt_family="AluSx" FT repeat_region 3242250..3242521 FT /rpt_family="AluSx" FT repeat_region 3242523..3242812 FT /rpt_family="AluSg" FT repeat_region 3242813..3242979 FT /rpt_family="AluSg/x" FT repeat_region 3242988..3243131 FT /rpt_family="MIR" FT repeat_region complement(3243145..3243239) FT /rpt_family="(CAAAA)n" FT repeat_region complement(3243274..3243579) FT /rpt_family="AluJb" FT repeat_region complement(3243626..3244060) FT /rpt_family="MLT1C" FT misc_feature 3244126..3244271 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 85.000" FT repeat_region complement(3244344..3244517) FT /rpt_family="(CA)n" FT repeat_region complement(3244609..3244722) FT /rpt_family="(CATA)n" FT repeat_region 3244756..3244859 FT /rpt_family="(CATG)n" FT repeat_region 3244887..3244998 FT /rpt_family="(CATG)n" FT repeat_region complement(3245000..3245105) FT /rpt_family="(CA)n" FT repeat_region complement(3245110..3245228) FT /rpt_family="(CA)n" FT repeat_region complement(3245272..3245410) FT /rpt_family="(CA)n" FT repeat_region 3245813..3246052 FT /rpt_family="L1ME2" FT repeat_region 3246080..3246361 FT /rpt_family="AluSx" FT repeat_region complement(3246362..3246395) FT /rpt_family="(GA)n" FT repeat_region 3246420..3246723 FT /rpt_family="AluJb" FT repeat_region 3246724..3246993 FT /rpt_family="L1ME2" FT repeat_region complement(3247128..3247423) FT /rpt_family="AluY" FT repeat_region complement(3247424..3247559) FT /rpt_family="AluJb" FT repeat_region complement(3247765..3248062) FT /rpt_family="AluSq" FT repeat_region complement(3248063..3248151) FT /rpt_family="L1MB3" FT repeat_region complement(3248152..3248317) FT /rpt_family="FRAM" FT repeat_region complement(3248318..3248832) FT /rpt_family="L1MB3" FT repeat_region complement(3248841..3248950) FT /rpt_family="(GGAA)n" FT repeat_region complement(3249760..3249827) FT /rpt_family="MIR" FT repeat_region complement(3250134..3250204) FT /rpt_family="L1MB3" FT repeat_region 3250205..3250504 FT /rpt_family="AluY" FT repeat_region complement(3250509..3250978) FT /rpt_family="L1MB2" FT misc_feature 3250982..3251071 FT /note="BLASTX similarity to 606976 (49..78); match: 0.83, FT score: 4.8e-10; database searched: nr; (U16800) FT ribonucleoprotein [Xenopus laevis]" FT misc_feature 3250983..3251065 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(3251215..3251260) FT /rpt_family="MIR" FT repeat_region complement(3251227..3251260) FT /rpt_family="LINE2" FT repeat_region complement(3251374..3251481) FT /rpt_family="LINE2" FT repeat_region complement(3251655..3251972) FT /rpt_family="AluSx" FT repeat_region complement(3252044..3252332) FT /rpt_family="AluJo" FT repeat_region 3252755..3252852 FT /rpt_family="MIR" FT repeat_region complement(3252871..3253002) FT /rpt_family="LINE2" FT repeat_region complement(3253221..3253599) FT /rpt_family="MLT1F" FT repeat_region complement(3253646..3253760) FT /rpt_family="MIR" FT repeat_region complement(3254203..3254304) FT /rpt_family="(TGGA)n" FT repeat_region complement(3254346..3254609) FT /rpt_family="(TGGA)n" FT repeat_region complement(3254656..3254772) FT /rpt_family="(TGGA)n" FT repeat_region complement(3254791..3254988) FT /rpt_family="(TGAA)n" FT repeat_region complement(3255193..3255476) FT /rpt_family="AluSx" FT repeat_region 3255631..3255770 FT /rpt_family="MIR" FT repeat_region 3255781..3256076 FT /rpt_family="AluSx" FT misc_feature 3256168..3256256 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 50.000" FT repeat_region complement(3256533..3256565) FT /rpt_family="(TAA)n" FT repeat_region complement(3256566..3256865) FT /rpt_family="AluSx" FT repeat_region complement(3256866..3257096) FT /rpt_family="AluJo" FT repeat_region complement(3257112..3257458) FT /rpt_family="LINE2" FT repeat_region complement(3257471..3257773) FT /rpt_family="AluSp" FT repeat_region complement(3257780..3257815) FT /rpt_family="(TAAA)n" FT repeat_region complement(3257816..3257964) FT /rpt_family="AluJo" FT repeat_region complement(3257965..3258255) FT /rpt_family="AluSq" FT repeat_region complement(3258261..3258281) FT /rpt_family="AT_rich" FT repeat_region complement(3258286..3258419) FT /rpt_family="AluJo" FT repeat_region complement(3258422..3258592) FT /rpt_family="MLT1D" FT repeat_region complement(3258608..3258908) FT /rpt_family="AluJo" FT repeat_region 3259248..3259458 FT /rpt_family="MER20" FT repeat_region 3259697..3259905 FT /rpt_family="MER20" FT repeat_region complement(3259941..3260106) FT /rpt_family="MER33" FT repeat_region complement(3260113..3260424) FT /rpt_family="AluSx" FT repeat_region complement(3260451..3260619) FT /rpt_family="AluJ" FT repeat_region complement(3260620..3260919) FT /rpt_family="AluY" FT repeat_region complement(3260921..3261061) FT /rpt_family="AluJ" FT repeat_region 3261136..3261432 FT /rpt_family="AluSg" FT repeat_region 3261447..3261532 FT /rpt_family="MER33" FT repeat_region 3261534..3261839 FT /rpt_family="AluJo" FT repeat_region complement(3262031..3262326) FT /rpt_family="AluSx" FT repeat_region 3262328..3262421 FT /rpt_family="MER3" FT repeat_region 3262667..3262961 FT /rpt_family="AluSx" FT repeat_region 3262973..3263264 FT /rpt_family="AluSx" FT repeat_region 3263279..3263576 FT /rpt_family="AluSx" FT repeat_region 3263621..3263922 FT /rpt_family="AluSx" FT repeat_region 3264134..3264253 FT /rpt_family="FLAM_A" FT repeat_region complement(3264311..3264380) FT /rpt_family="L1ME" FT repeat_region complement(3264410..3264713) FT /rpt_family="AluY" FT repeat_region complement(3264714..3265011) FT /rpt_family="AluSx" FT repeat_region 3265053..3265286 FT /rpt_family="AluJo" FT repeat_region complement(3265304..3265500) FT /rpt_family="MER66A" FT repeat_region 3265562..3265793 FT /rpt_family="MER41B" FT repeat_region complement(3265803..3266105) FT /rpt_family="AluSx" FT repeat_region complement(3266106..3266367) FT /rpt_family="MER66B" FT repeat_region 3266368..3266439 FT /rpt_family="AluJo" FT repeat_region complement(3266467..3266662) FT /rpt_family="L1ME3" FT misc_feature complement(3266944..3267023) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 59.000" FT repeat_region complement(3267064..3267120) FT /rpt_family="(CA)n" FT repeat_region 3267932..3267973 FT /rpt_family="MIR" FT repeat_region complement(3267995..3268303) FT /rpt_family="AluSx" FT repeat_region 3268385..3268418 FT /rpt_family="(TGAA)n" FT repeat_region complement(3269181..3269475) FT /rpt_family="AluSq" FT repeat_region complement(3269771..3269888) FT /rpt_family="AluJo/FRAM" FT repeat_region 3269899..3269988 FT /rpt_family="MIR" FT misc_feature complement(3270073..3270207) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 64.000" FT repeat_region 3270292..3270423 FT /rpt_family="(GGGA)n" FT repeat_region 3270504..3270625 FT /rpt_family="(CGGG)n" FT repeat_region complement(3270673..3270713) FT /rpt_family="GC_rich" FT repeat_region 3272084..3272385 FT /rpt_family="AluSc" FT misc_feature complement(3272507..3272677) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 79.000" FT repeat_region complement(3273166..3273282) FT /rpt_family="MLT1G" FT repeat_region complement(3273407..3273576) FT /rpt_family="MLT1G" FT repeat_region complement(3274294..3274408) FT /rpt_family="(CA)n" FT repeat_region complement(3274437..3274534) FT /rpt_family="(CA)n" FT repeat_region complement(3274902..3275077) FT /rpt_family="(GA)n" FT repeat_region 3275437..3275467 FT /rpt_family="(CAGA)n" FT misc_feature 3275854..3275982 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature 3274308..3284142 FT /note="Draft Sequence Produced by DOE Joint Genome FT Institute; www.jgi.doe.gov; Finishing Completed at Stanford FT Human Genome Center; www-shgc.stanford.edu; Quality: Phrap FT Quality >=40 99.6% of Sequence; Estimated Total Number of FT Errors is 0.; NOTE: This sequence is not the entire FT sequence of the clone. It is sequence generated to span the FT gap between AC006505 and AC010649. The overlap with FT AC006505 is 7521bp and the overlap with AC010649 is FT 5632bp." FT repeat_region complement(3331283..3331580) FT /rpt_family="MLT1B" FT repeat_region complement(3331581..3331879) FT /rpt_family="AluY" FT repeat_region complement(3331880..3332006) FT /rpt_family="MLT1B" FT repeat_region complement(3332047..3332170) FT /rpt_family="L1ME" FT repeat_region 3332171..3332230 FT /rpt_family="(TTCC)n" FT repeat_region 3332231..3332617 FT /rpt_family="(TTCC)n" FT repeat_region 3332647..3332996 FT /rpt_family="(TTCC)n" FT repeat_region complement(3333003..3333269) FT /rpt_family="AluSx" FT repeat_region 3333276..3333397 FT /rpt_family="CT-rich" FT repeat_region complement(3333399..3333732) FT /rpt_family="AluJo" FT repeat_region complement(3333733..3333913) FT /rpt_family="MLT1C" FT repeat_region complement(3333943..3334239) FT /rpt_family="AluSg" FT repeat_region complement(3334265..3334353) FT /rpt_family="L1ME" FT repeat_region complement(3334377..3334563) FT /rpt_family="AluJ" FT repeat_region 3334564..3334620 FT /rpt_family="(TTCTC)n" FT repeat_region complement(3334621..3334752) FT /rpt_family="AluJ" FT repeat_region 3334925..3335234 FT /rpt_family="AluSx" FT misc_feature 3335311..3335406 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 86.000" FT repeat_region 3336025..3336238 FT /rpt_family="MIR" FT repeat_region complement(3336263..3336444) FT /rpt_family="L2" FT repeat_region 3337707..3337863 FT /rpt_family="MIR" FT repeat_region complement(3337884..3338008) FT /rpt_family="AluJb" FT repeat_region 3338099..3338414 FT /rpt_family="AluSx" FT repeat_region complement(3339116..3339427) FT /rpt_family="AluSx" FT repeat_region complement(3339432..3339443) FT /rpt_family="AluSx" FT repeat_region 3339444..3339480 FT /rpt_family="(TTTA)n" FT repeat_region complement(3339481..3339762) FT /rpt_family="AluSx" FT repeat_region complement(3339981..3340084) FT /rpt_family="MIR" FT repeat_region complement(3340225..3340289) FT /rpt_family="MIR" FT repeat_region 3340799..3340844 FT /rpt_family="MIR" FT repeat_region complement(3340885..3341148) FT /rpt_family="AluSx" FT repeat_region complement(3341153..3341448) FT /rpt_family="AluY" FT repeat_region 3341834..3341887 FT /rpt_family="MIR" FT repeat_region 3341891..3342190 FT /rpt_family="AluSx" FT repeat_region 3342460..3342579 FT /rpt_family="MIR" FT repeat_region 3342607..3342638 FT /rpt_family="(TTTA)n" FT repeat_region complement(3342639..3342922) FT /rpt_family="AluSx" FT repeat_region 3342948..3343019 FT /rpt_family="AluJo/FRAM" FT repeat_region 3343028..3343231 FT /rpt_family="AluJo" FT repeat_region 3343232..3343537 FT /rpt_family="AluSx" FT repeat_region 3343577..3343620 FT /rpt_family="L2" FT repeat_region complement(3343699..3343920) FT /rpt_family="MER20" FT repeat_region complement(3343935..3344026) FT /rpt_family="MIR" FT misc_feature 3344334..3344426 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 60.000" FT repeat_region complement(3344627..3344764) FT /rpt_family="FLAM_C" FT repeat_region complement(3344765..3344826) FT /rpt_family="L2" FT repeat_region complement(3344801..3345103) FT /rpt_family="L2" FT repeat_region 3345100..3345180 FT /rpt_family="MIR" FT repeat_region 3345240..3345717 FT /rpt_family="L2" FT repeat_region 3345718..3346006 FT /rpt_family="AluSx" FT repeat_region 3346007..3346053 FT /rpt_family="L2" FT misc_feature 3346580..3346630 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 69.000" FT misc_feature 3346700..3346865 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 63.000" FT repeat_region 3347482..3347593 FT /rpt_family="AluJo" FT repeat_region 3347594..3347897 FT /rpt_family="AluSx" FT repeat_region 3348159..3348268 FT /rpt_family="MIR" FT repeat_region 3348320..3348401 FT /rpt_family="MIR" FT repeat_region complement(3348597..3348909) FT /rpt_family="AluSx" FT repeat_region complement(3348967..3349276) FT /rpt_family="AluSg" FT repeat_region 3349325..3349420 FT /rpt_family="MIR" FT repeat_region complement(3349424..3349505) FT /rpt_family="AluSq/x" FT repeat_region 3349506..3349802 FT /rpt_family="AluSg" FT repeat_region complement(3349803..3349986) FT /rpt_family="AluSq/x" FT repeat_region complement(3349988..3350281) FT /rpt_family="AluJo" FT repeat_region 3350289..3350538 FT /rpt_family="MER58B" FT repeat_region 3350615..3350917 FT /rpt_family="AluSx" FT repeat_region 3350927..3351240 FT /rpt_family="AluJo" FT repeat_region 3351252..3351550 FT /rpt_family="AluY" FT repeat_region complement(3351769..3351942) FT /rpt_family="MIR" FT repeat_region 3352049..3352356 FT /rpt_family="AluJb" FT repeat_region 3352461..3352493 FT /rpt_family="AT_rich" FT repeat_region complement(3352494..3352781) FT /rpt_family="AluSx" FT repeat_region complement(3352784..3353087) FT /rpt_family="AluJo" FT repeat_region 3353122..3353419 FT /rpt_family="AluSx" FT repeat_region 3353495..3353624 FT /rpt_family="L1MC4" FT repeat_region 3353647..3353709 FT /rpt_family="MER58" FT repeat_region 3353714..3353778 FT /rpt_family="MIR" FT repeat_region 3353781..3353904 FT /rpt_family="AluJo" FT repeat_region complement(3353905..3354199) FT /rpt_family="AluSx" FT repeat_region 3354200..3354398 FT /rpt_family="AluJo" FT repeat_region complement(3354455..3354599) FT /rpt_family="FAM" FT repeat_region 3354620..3354642 FT /rpt_family="(TTTA)n" FT repeat_region complement(3354643..3354848) FT /rpt_family="AluSg/x" FT repeat_region complement(3355200..3355499) FT /rpt_family="AluY" FT repeat_region complement(3355547..3355657) FT /rpt_family="FLAM_A" FT repeat_region 3355819..3355928 FT /rpt_family="MER106" FT repeat_region complement(3355935..3356246) FT /rpt_family="AluY" FT repeat_region complement(3356249..3356545) FT /rpt_family="AluSx" FT repeat_region complement(3356554..3356847) FT /rpt_family="AluJo" FT repeat_region complement(3356854..3357138) FT /rpt_family="L1ME" FT repeat_region 3357187..3357454 FT /rpt_family="MLT1-INTERNAL" FT repeat_region 3357473..3357642 FT /rpt_family="MIR" FT repeat_region 3359251..3359290 FT /rpt_family="(TG)n" FT repeat_region 3359352..3359377 FT /rpt_family="(CCG)n" FT repeat_region 3359395..3359541 FT /rpt_family="G-rich" FT repeat_region 3359544..3359627 FT /rpt_family="C-rich" FT repeat_region 3359854..3359904 FT /rpt_family="GC_rich" FT repeat_region 3359988..3360015 FT /rpt_family="GC_rich" FT repeat_region 3360093..3360176 FT /rpt_family="GC_rich" FT repeat_region 3360215..3360240 FT /rpt_family="GC_rich" FT repeat_region 3360252..3360365 FT /rpt_family="GC_rich" FT mRNA 3359635..>3382241 FT /gene="NFIC" FT /product="Human mRNA for CAAT-box binding transcription FT factor CTF-1" FT CDS join(3359681..3359683,3381710..>3382241) FT /codon_start=1 FT /gene="NFIC" FT /product="CTF-1" FT /note="CAAT-box binding transcription factor CTF-1; First FT two exons shared in alternatively spliced products CTF-1, FT CTF-2 and CTF-3" FT /protein_id="AAC32594.1" FT /translation="MDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEE FT RAVKDELLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGCVLSNPDQKG FT KMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVA FT VKELDLYLAYFVRER" FT repeat_region 3361899..3362014 FT /rpt_family="(CA)n" FT misc_feature 3362086..3362159 FT /gene="NFIC" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 93.000" FT repeat_region complement(3362212..3362314) FT /rpt_family="(CA)n" FT repeat_region complement(3362374..3362431) FT /rpt_family="(CA)n" FT repeat_region complement(3362488..3362638) FT /rpt_family="(CA)n" FT repeat_region 3362706..3362732 FT /rpt_family="MIR" FT repeat_region 3363149..3363267 FT /rpt_family="(TA)n" FT repeat_region complement(3363268..3363569) FT /rpt_family="AluSq" FT repeat_region complement(3363578..3363652) FT /rpt_family="(CA)n" FT repeat_region 3363703..3363905 FT /rpt_family="MER20" FT misc_feature 3364209..3364895 FT /note="DDS similarity to overlapping ESTs: ~(9423..9860) FT R67210 yi31a12.r1 Homo sapiens cDNA clone 140830 5'; Score: FT 773 Identity: 423/445 (95%).~(10109..9592) N47689 FT yy92c09.s1 Homo sapiens cDNA clone 281008 3'; Score: 999 FT Identity: 514/521 (98%)." FT repeat_region complement(3364624..3364671) FT /rpt_family="MIR" FT repeat_region 3365091..3365182 FT /rpt_family="MIR" FT repeat_region 3366371..3366564 FT /rpt_family="(GA)n" FT repeat_region complement(3366591..3366634) FT /rpt_family="GC_rich" FT mRNA 3366613..>3382241 FT /gene="NFIC" FT /product="HSNF1C H.sapiens mRNA for NFI/CAAT-binding FT transcription factor 5 (CTF5)" FT CDS join(3366635..3366664,3381710..>3382241) FT /codon_start=1 FT /gene="NFIC" FT /product="CTF5" FT /function="CCAAT-binding transcription factor" FT /function="DNA binding protein" FT /note="NFI /CCAAT-binding transcription factor 5" FT /protein_id="AAC32593.1" FT /translation="MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKH FT EKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAPGC FT VLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLC FT VQPHHIGVAVKELDLYLAYFVRER" FT repeat_region complement(3366675..3366710) FT /rpt_family="GC_rich" FT repeat_region complement(3367376..3367492) FT /rpt_family="GC_rich" FT repeat_region 3368007..3368055 FT /rpt_family="MIR" FT repeat_region complement(3368866..3368979) FT /rpt_family="(CAGA)n" FT repeat_region complement(3369141..3369273) FT /rpt_family="(CAGA)n" FT repeat_region complement(3369279..3369400) FT /rpt_family="(GA)n" FT repeat_region complement(3370301..3370397) FT /rpt_family="(GA)n" FT repeat_region complement(3370480..3370618) FT /rpt_family="(GA)n" FT repeat_region complement(3370636..3370760) FT /rpt_family="(GA)n" FT repeat_region complement(3371321..3371409) FT /rpt_family="AluSg/x" FT repeat_region 3371437..3371479 FT /rpt_family="LINE2" FT repeat_region 3371480..3371517 FT /rpt_family="(TGAA)n" FT repeat_region complement(3371853..3372040) FT /rpt_family="(GGAA)n" FT repeat_region complement(3372041..3372318) FT /rpt_family="AluSx" FT repeat_region 3372716..3372842 FT /rpt_family="MIR" FT repeat_region complement(3372848..3373142) FT /rpt_family="AluSx" FT repeat_region 3373358..3373867 FT /rpt_family="LINE2" FT repeat_region 3375396..3375477 FT /rpt_family="MIR" FT repeat_region 3376172..3376446 FT /rpt_family="AluJo" FT repeat_region 3376476..3376703 FT /rpt_family="AluJo" FT repeat_region complement(3376724..3377026) FT /rpt_family="AluSq" FT repeat_region 3377069..3377351 FT /rpt_family="AluY" FT repeat_region complement(3377608..3377908) FT /rpt_family="AluJb" FT repeat_region complement(3377916..3377960) FT /rpt_family="AluJb" FT repeat_region 3377962..3378279 FT /rpt_family="AluSq" FT repeat_region complement(3378281..3378392) FT /rpt_family="AluJb" FT repeat_region 3378590..3378626 FT /rpt_family="MIR" FT repeat_region complement(3379056..3379355) FT /rpt_family="AluSg" FT repeat_region complement(3379359..3379643) FT /rpt_family="AluSx" FT repeat_region complement(3379675..3379979) FT /rpt_family="AluJo" FT repeat_region complement(3379997..3380301) FT /rpt_family="AluY" FT repeat_region complement(3380313..3380624) FT /rpt_family="AluSq" FT repeat_region complement(3380630..3380951) FT /rpt_family="AluJo" FT repeat_region 3381107..3381413 FT /rpt_family="AluSq" FT misc_feature 3381844..3382246 FT /note="DDS similarity to EST: ~(27058..27460) AA079197 FT zm95c08.r1 Stratagene colon HT29 (#937221) Homo sapiens FT cDNA clone 545678 5' similar to gb:X12492 CCAAT BOX-BINDING FT TRANSCRIPTION FACTOR 1 (HUMAN); Score: 648 Identity: FT 385/417 (92%)." FT repeat_region 3383836..3383984 FT /rpt_family="MIR" FT repeat_region complement(3384051..3384362) FT /rpt_family="AluJb" FT repeat_region complement(3384385..3384685) FT /rpt_family="AluSq" FT repeat_region 3385265..3385363 FT /rpt_family="MIR" FT repeat_region complement(3385511..3385567) FT /rpt_family="(CAAA)n" FT repeat_region complement(3385569..3385869) FT /rpt_family="AluSx" FT repeat_region complement(3385873..3386004) FT /rpt_family="AluJb" FT repeat_region 3386103..3386242 FT /rpt_family="AluSq/x" FT repeat_region complement(3386319..3386620) FT /rpt_family="AluSx" FT repeat_region complement(3386621..3386738) FT /rpt_family="MIR" FT repeat_region 3387218..3387511 FT /rpt_family="AluSx" FT repeat_region complement(3387538..3387718) FT /rpt_family="LINE2" FT repeat_region complement(3387962..3388050) FT /rpt_family="GC_rich" FT repeat_region complement(3388310..3388515) FT /rpt_family="MIR" FT repeat_region 3388539..3388831 FT /rpt_family="AluJo" FT repeat_region 3388857..3389010 FT /rpt_family="AluSg/x" FT repeat_region 3389140..3389175 FT /rpt_family="(TGAA)n" FT misc_feature complement(3389439..3389471) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 78.000" FT repeat_region 3389574..3389620 FT /rpt_family="MIR" FT repeat_region 3389699..3390000 FT /rpt_family="AluSp" FT repeat_region 3390507..3390673 FT /rpt_family="MIR" FT repeat_region 3390681..3391011 FT /rpt_family="L1MB3" FT repeat_region 3391014..3391250 FT /rpt_family="AluJo" FT repeat_region 3391270..3391314 FT /rpt_family="L1MB3" FT repeat_region 3391367..3391511 FT /rpt_family="AluSq/x" FT repeat_region 3391513..3391803 FT /rpt_family="AluSx" FT misc_feature complement(3391859..3392038) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region 3391943..3392030 FT /rpt_family="MIR" FT repeat_region complement(3392068..3392369) FT /rpt_family="AluSx" FT repeat_region complement(3392842..3392869) FT /rpt_family="MIR" FT repeat_region complement(3392937..3393220) FT /rpt_family="AluSg" FT repeat_region 3393531..3393834 FT /rpt_family="AluSx" FT repeat_region complement(3393843..3393932) FT /rpt_family="MER33" FT repeat_region complement(3393945..3394074) FT /rpt_family="AluSg/x" FT repeat_region 3394195..3394486 FT /rpt_family="AluJo" FT repeat_region complement(3394533..3394614) FT /rpt_family="MER33" FT repeat_region 3394643..3394970 FT /rpt_family="MER1B" FT repeat_region 3395075..3395356 FT /rpt_family="AluSx" FT repeat_region complement(3395491..3395673) FT /rpt_family="AluJo" FT repeat_region complement(3395679..3395958) FT /rpt_family="AluSg" FT repeat_region 3396188..3396489 FT /rpt_family="AluY" FT repeat_region 3396672..3396972 FT /rpt_family="AluSx" FT repeat_region complement(3397068..3397273) FT /rpt_family="MIR" FT repeat_region complement(3407111..3407410) FT /rpt_family="AluY" FT repeat_region complement(3407434..3407729) FT /rpt_family="AluSg" FT misc_feature 3408026..3408416 FT /note="BLASTN similarity to AQ181777 (1..391); match: 0.98, FT score: 1.3e-152; database searched: month.na; FT HS_3225_A1_B06_MR CIT Approved Human Genomic Sperm Library FT D Homo sapiens genomic clone Plate=3225 Col=11 Row=C," FT repeat_region complement(3408446..3408616) FT /rpt_family="AluJo" FT repeat_region complement(3408618..3408880) FT /rpt_family="AluSc" FT repeat_region complement(3408883..3409029) FT /rpt_family="AluJo" FT repeat_region 3409077..3409437 FT /rpt_family="LINE2" FT repeat_region 3409924..3410042 FT /rpt_family="AluJo/FLAM" FT repeat_region complement(3410043..3410252) FT /rpt_family="AluY" FT repeat_region complement(3410343..3410658) FT /rpt_family="LINE2" FT repeat_region complement(3411011..3411317) FT /rpt_family="AluJo" FT repeat_region complement(3411327..3411617) FT /rpt_family="AluSx" FT misc_feature complement(3411787..3411959) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 79.000" FT repeat_region complement(3412081..3412247) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(3412248..3412554) FT /rpt_family="AluJo" FT repeat_region 3412615..3412649 FT /rpt_family="MIR" FT repeat_region complement(3413016..3413246) FT /rpt_family="AluSx" FT repeat_region complement(3413643..3413896) FT /rpt_family="AluSx" FT repeat_region 3413937..3414082 FT /rpt_family="LINE2" FT repeat_region complement(3414116..3414181) FT /rpt_family="MIR" FT repeat_region 3414187..3414268 FT /rpt_family="MER58A" FT repeat_region 3414313..3414610 FT /rpt_family="AluSg" FT repeat_region 3414611..3414654 FT /rpt_family="(TAAAA)n" FT repeat_region complement(3414803..3414835) FT /rpt_family="(CAAA)n" FT repeat_region complement(3414836..3415137) FT /rpt_family="AluSx" FT repeat_region complement(3415154..3415420) FT /rpt_family="AluSx" FT repeat_region complement(3415499..3415595) FT /rpt_family="MIR" FT repeat_region 3415873..3416176 FT /rpt_family="AluJo" FT repeat_region 3416269..3416389 FT /rpt_family="(TA)n" FT repeat_region complement(3416394..3416511) FT /rpt_family="(TA)n" FT repeat_region complement(3416517..3416816) FT /rpt_family="AluSp" FT repeat_region 3416831..3416881 FT /rpt_family="AluSp" FT repeat_region complement(3416885..3417182) FT /rpt_family="AluY" FT repeat_region 3417183..3417286 FT /rpt_family="FLAM_C" FT repeat_region complement(3417623..3417935) FT /rpt_family="AluY" FT repeat_region 3417963..3418094 FT /rpt_family="MER3" FT repeat_region complement(3418095..3418394) FT /rpt_family="AluJo" FT repeat_region 3418568..3418867 FT /rpt_family="AluSq" FT repeat_region 3418882..3419256 FT /rpt_family="L1MB3" FT repeat_region 3419323..3419481 FT /rpt_family="FRAM" FT repeat_region 3419485..3419811 FT /rpt_family="AluSx" FT repeat_region 3419850..3420036 FT /rpt_family="L1" FT repeat_region 3420037..3420338 FT /rpt_family="AluJo" FT repeat_region 3420339..3420569 FT /rpt_family="AluSg/x" FT repeat_region complement(3420729..3421020) FT /rpt_family="AluSx" FT repeat_region complement(3421025..3421118) FT /rpt_family="MIR" FT repeat_region 3421182..3421213 FT /rpt_family="LINE2" FT repeat_region complement(3421783..3421929) FT /rpt_family="AluJ" FT repeat_region complement(3421930..3422232) FT /rpt_family="AluSp" FT repeat_region complement(3422239..3422366) FT /rpt_family="AluJ" FT repeat_region 3422434..3422729 FT /rpt_family="AluY" FT repeat_region 3422914..3423215 FT /rpt_family="AluSx" FT repeat_region complement(3423338..3423404) FT /rpt_family="MIR" FT repeat_region 3423904..3423991 FT /rpt_family="MIR" FT repeat_region complement(3423994..3424023) FT /rpt_family="(TAAAA)n" FT repeat_region complement(3424025..3424325) FT /rpt_family="AluSx" FT repeat_region complement(3424345..3424398) FT /rpt_family="7SLRNA" FT repeat_region complement(3424356..3424405) FT /rpt_family="FLAM_A" FT repeat_region complement(3424411..3424680) FT /rpt_family="AluSx" FT repeat_region complement(3424688..3424810) FT /rpt_family="MIR" FT CDS join(<3425103..3425175,3433516..3433590,3434275..3434398, FT 3435081..3435205,3449012..>3449139) FT /codon_start=1 FT /gene="NFIC" FT /product="NFI1_HUMAN, [AA 188-362]" FT /note="CCAAT BOX-BINDING TRANSCRIPTION FACTOR 1; Exons also FT shared by alternatively spliced products CTF-2/3 (P08652) FT and CTF5 (gi|1359830); CTF-1; NUCLEAR FACTOR 1; NF-I; FT TGGCA-BINDING PROTEIN" FT /protein_id="AAC62842.1" FT /translation="DAEQSGSPRTGMGSDQEDSKPITLDTTDFQESFVTSGVFSVTELI FT QVSRTPVVTGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSSSGSKRHKSGSMEEDV FT DTSPGGDYYTSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFT FT QHHRPVIAVHSG" FT misc_feature 3425104..3425198 FT /gene="NFIC" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 99.000" FT repeat_region complement(3425262..3425373) FT /rpt_family="MIR" FT repeat_region complement(3425456..3425757) FT /rpt_family="AluSx" FT repeat_region complement(3425760..3425930) FT /rpt_family="AluJ" FT repeat_region complement(3425931..3426229) FT /rpt_family="AluSg" FT repeat_region complement(3426243..3426376) FT /rpt_family="AluJ" FT repeat_region 3426450..3426892 FT /rpt_family="LINE2" FT repeat_region complement(3426924..3427223) FT /rpt_family="AluY" FT repeat_region 3427318..3427453 FT /rpt_family="LINE2" FT repeat_region 3427454..3427541 FT /rpt_family="(GAA)n" FT repeat_region 3427545..3427832 FT /rpt_family="AluSx" FT repeat_region 3427837..3427884 FT /rpt_family="(GAAA)n" FT repeat_region 3427886..3428188 FT /rpt_family="AluSp" FT repeat_region 3428209..3428338 FT /rpt_family="AluSq/x" FT repeat_region 3429001..3429131 FT /rpt_family="FLAM_C" FT repeat_region 3429135..3429172 FT /rpt_family="(CA)n" FT repeat_region 3429177..3429245 FT /rpt_family="FLAM_A" FT repeat_region 3429248..3429293 FT /rpt_family="(CA)n" FT repeat_region 3429296..3429601 FT /rpt_family="AluJo" FT repeat_region 3429756..3429853 FT /rpt_family="LINE2" FT repeat_region 3429985..3430057 FT /rpt_family="LINE2" FT repeat_region complement(3430129..3430218) FT /rpt_family="L1MB4" FT repeat_region complement(3430239..3430521) FT /rpt_family="AluSx" FT repeat_region complement(3430522..3430655) FT /rpt_family="L1MB7" FT repeat_region 3430662..3430949 FT /rpt_family="AluSg" FT repeat_region complement(3430965..3431065) FT /rpt_family="L1MB7" FT repeat_region complement(3431071..3431327) FT /rpt_family="AluSq" FT repeat_region complement(3431365..3431665) FT /rpt_family="AluJb" FT repeat_region complement(3431666..3431800) FT /rpt_family="AluJb" FT repeat_region complement(3431802..3431937) FT /rpt_family="L1MB7" FT repeat_region 3431957..3432098 FT /rpt_family="LINE2" FT repeat_region 3432142..3432211 FT /rpt_family="MIR" FT repeat_region complement(3432313..3432451) FT /rpt_family="LINE2" FT repeat_region complement(3432521..3432653) FT /rpt_family="MIR" FT repeat_region complement(3432667..3432966) FT /rpt_family="AluY" FT repeat_region complement(3432975..3433262) FT /rpt_family="AluJo" FT repeat_region 3434690..3434782 FT /rpt_family="MIR" FT repeat_region 3435013..3435039 FT /rpt_family="GC_rich" FT repeat_region complement(3435822..3436125) FT /rpt_family="AluSp" FT repeat_region complement(3436141..3436461) FT /rpt_family="AluJb" FT repeat_region complement(3436470..3436772) FT /rpt_family="AluSx" FT repeat_region 3436793..3436951 FT /rpt_family="MIR" FT repeat_region 3437084..3437380 FT /rpt_family="AluY" FT repeat_region 3437583..3437653 FT /rpt_family="AluS" FT repeat_region complement(3437685..3437993) FT /rpt_family="AluSq" FT repeat_region complement(3438434..3438734) FT /rpt_family="AluY" FT repeat_region 3439024..3439098 FT /rpt_family="MIR" FT repeat_region 3439141..3439351 FT /rpt_family="AluJo" FT repeat_region 3439352..3439373 FT /rpt_family="POLY_A" FT repeat_region 3439374..3439646 FT /rpt_family="AluSq" FT repeat_region complement(3439688..3439985) FT /rpt_family="AluY" FT repeat_region complement(3440176..3440351) FT /rpt_family="MER20" FT repeat_region complement(3440428..3440683) FT /rpt_family="AluSx" FT repeat_region complement(3440687..3440818) FT /rpt_family="AluSq/x" FT repeat_region complement(3440828..3441106) FT /rpt_family="AluJo" FT repeat_region complement(3441179..3441275) FT /rpt_family="MIR" FT repeat_region complement(3442379..3442684) FT /rpt_family="AluSx" FT repeat_region 3442750..3442889 FT /rpt_family="MIR" FT repeat_region 3442919..3443122 FT /rpt_family="MER20" FT repeat_region 3443150..3443439 FT /rpt_family="AluJo" FT repeat_region 3443668..3443858 FT /rpt_family="MER20" FT repeat_region 3444804..3444945 FT /rpt_family="(CATG)n" FT repeat_region 3444974..3445063 FT /rpt_family="(CA)n" FT repeat_region complement(3445065..3445194) FT /rpt_family="(CATG)n" FT repeat_region 3445196..3445240 FT /rpt_family="(CA)n" FT repeat_region 3445902..3446078 FT /rpt_family="MER20" FT repeat_region 3446308..3446513 FT /rpt_family="MER20" FT repeat_region 3446748..3447008 FT /rpt_family="AluJo" FT repeat_region 3447015..3447316 FT /rpt_family="AluSx" FT repeat_region complement(3447894..3448068) FT /rpt_family="AluSp" FT repeat_region complement(3448073..3448370) FT /rpt_family="AluSx" FT repeat_region complement(3449142..3449178) FT /rpt_family="GC_rich" FT repeat_region 3449476..3449773 FT /rpt_family="AluSx" FT repeat_region 3449774..3450060 FT /rpt_family="AluSg" FT repeat_region 3450073..3450359 FT /rpt_family="AluY" FT repeat_region 3450372..3450433 FT /rpt_family="Alu" FT mRNA <3452480..3462975 FT /gene="NFIC" FT /product="H.sapiens mRNA for NFI/CAAT-binding transcription FT factor 5 (CTF5)" FT mRNA <3452480..3462949 FT /gene="NFIC" FT /product="Human mRNA for CAAT-box binding transcription FT factor CTF-1 (syn. CTF/NFI or CTF or NF-I or NF-1)" FT gene <3452480..3462975 FT /gene="NFIC" FT /note="nuclear factor I/C (CCAAT-binding transcription FT factor)" FT CDS join(<3452480..3452664,3462750..3462767) FT /codon_start=3 FT /gene="NFIC" FT /product="CTF5" FT /note="NFI /CAAT-binding transcription factor 5" FT /protein_id="AAC33192.1" FT /translation="IARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLK FT DLVSLACDPASQQPGPSWYLG" FT CDS join(<3452480..3452664,3453761..3453914,3456548..3456633, FT 3462750..3462767) FT /codon_start=3 FT /gene="NFIC" FT /product="NFI1_HUMAN" FT /note="CCAAT BOX-BINDING TRANSCRIPTION FACTOR 1" FT /protein_id="AAC33191.1" FT /translation="IARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLK FT DLVSLACDPASQQPGPLNGSGQLKMPSHCLSAQMLAPPPPGLPRLALPPATKPATTSEG FT GATSPTSPSYSPPDTSPANRSFVGLGPRDPAGIYQAQSWYLG" FT CDS join(<3452480..3452664,3456548..3456598) FT /codon_start=3 FT /gene="NFIC" FT /product="NFI2_HUMAN" FT /note="CCAAT BOX-BINDING TRANSCRIPTION FACTORS 2 AND 3" FT /protein_id="AAC33190.1" FT /translation="IARSPHPSSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLK FT DLVSLACDPASQQPGPPTLRPTRPLQTVPLWD" FT repeat_region 3453634..3453701 FT /rpt_family="GC_rich" FT misc_feature 3453761..3453914 FT /gene="NFIC" FT /note="DDS similarity to AA282279 zt12b08.r1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:712887 5' similar to FT gb:X12492 CCAAT BOX-BINDING TRANSCRIPTION FACTOR 1 (HUMAN); FT (89..242); 100% identity.~~Additional EST matches: FT AI094574" FT repeat_region 3454938..3455035 FT /rpt_family="MIR" FT repeat_region 3455399..3455431 FT /rpt_family="LINE2" FT repeat_region 3455432..3455441 FT /rpt_family="MIR" FT repeat_region 3455794..3455834 FT /rpt_family="MIR" FT misc_feature 3456548..3456633 FT /gene="NFIC" FT /note="DDS similarity to overlapping ESTs:~N20996 FT yx57g02.s1 Homo sapiens cDNA clone 265874 3' similar to FT gb:X12492 CCAAT BOX- BINDING TRANSCRIPTION FACTOR 1 FT (HUMAN); (297..211); 97% identity.~~AA282279 zt12b08.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:712887 5' FT similar to gb:X12492 CCAAT BOX-BINDING TRANSCRIPTION FACTOR FT 1 (HUMAN); (243..328); 100% identity." FT repeat_region complement(3456905..3456998) FT /rpt_family="MIR" FT repeat_region complement(3457342..3457397) FT /rpt_family="MIR" FT misc_feature 3457881..3457987 FT /gene="NFIC" FT /note="DDS similarity to AA282279 zt12b08.r1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:712887 5' similar to FT gb:X12492 CCAAT BOX-BINDING TRANSCRIPTION FACTOR 1 (HUMAN); FT (329..435); 100% identity.~" FT misc_feature complement(3458047..3458411) FT /gene="NFIC" FT /note="DDS similarity to AA282217 zt12b08.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:712887 3'; Score: 704 FT Identity: 361/363 (99%)." FT repeat_region complement(3458739..3458792) FT /rpt_family="LINE2" FT repeat_region 3459647..3459699 FT /rpt_family="(GGGA)n" FT repeat_region 3460325..3460420 FT /rpt_family="MIR" FT repeat_region complement(3460514..3460811) FT /rpt_family="AluSx" FT repeat_region 3460841..3461139 FT /rpt_family="AluSx" FT repeat_region 3461170..3461436 FT /rpt_family="AluJo" FT repeat_region 3461439..3461740 FT /rpt_family="AluSx" FT repeat_region complement(3461745..3461771) FT /rpt_family="AT_rich" FT repeat_region 3461772..3462067 FT /rpt_family="AluSc" FT repeat_region 3462098..3462398 FT /rpt_family="AluSq" FT repeat_region 3462446..3462551 FT /rpt_family="MER53" FT misc_feature 3462750..3462960 FT /gene="NFIC" FT /note="DDS similarity to N20996 yx57g02.s1 Homo sapiens FT cDNA clone 265874 3' similar to gb:X12492 CCAAT BOX- FT BINDING TRANSCRIPTION FACTOR 1 (HUMAN); (210..1); 98% FT identity.~~Additional EST matches: AI094574, AI083745" FT repeat_region 3462932..3462980 FT /rpt_family="(GAA)n" FT repeat_region complement(3463150..3463180) FT /rpt_family="GC_rich" FT misc_feature complement(3463232..3463679) FT /note="BLASTN similarity to AI089816 (15..462); match: FT 0.98, score: 3.6e-180; database searched: month.na; FT qa11c09.x1 NCI_CGAP_Brn23 Homo sapiens cDNA clone FT IMAGE:1686448 3' similar to contains MSR1.t3 MER22 FT repetitive" FT misc_feature 3464305..3465428 FT /note="DDS similarity to overlapping ESTs:~(12659..13136) FT AA497129 aa42c05.r1 Soares NhHMPu S1 Homo sapiens cDNA FT clone 823592 5'; Score: 751 Identity: 436/491 FT (88%).~~(12899..13296) N45485 yy59c07.r1 Homo sapiens cDNA FT clone 277836 5'. Score: 706 Identity: 381/402 FT (94%).~~(13506..13074) AA071297 zm73d09.s1 Stratagene FT neuroepithelium (#937231) Homo sapiens cDNA clone 531281 FT 3'; Score: 709 Identity: 411/442 (92%).~~(13782..13308) FT AA497062 aa42d05.s1 Soares NhHMPu S1 Homo sapiens cDNA FT clone 823593 3'; Score: 938 Identity: 472/475 FT (99%).~~Additional EST matches: AA497052, AI084488, FT AI081631, AI089816, AI095217" FT repeat_region 3465150..3465197 FT /rpt_family="POLY_A" FT repeat_region 3465322..3465462 FT /rpt_family="POLY_A" FT repeat_region complement(3466189..3466271) FT /rpt_family="(GAAAA)n" FT misc_feature complement(3466378..3466434) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 68.000" FT misc_feature complement(3466848..3466896) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 77.000" FT misc_feature 3466969..3467519 FT /note="DDS similarity to overlapping ESTs:~(15323..15764) FT T66221 yc77c09.r1 Homo sapiens cDNA clone 22061 5'. Score: FT 812 Identity: 433/442 (97%).~~(15453..15873) AA291892 FT zt38h07.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 724669 5'; Score: 737 Identity: 396/420 (94%).~~" FT repeat_region complement(3467747..3467787) FT /rpt_family="(TA)n" FT misc_feature 3467798..3468381 FT /note="DDS similarity to overlapping ESTs:~(16152..16427) FT N44238 yy31e07.r1 Homo sapiens cDNA clone 272868 5'. Score: FT 524 Identity: 269/276 (97%).~~(16161..16479) AA350448 FT EST57713 Infant brain Homo sapiens cDNA 5' end; Score: 558 FT Identity: 299/319 (93%).~~(16212..16541) T80464 yd08h03.r1 FT Homo sapiens cDNA clone 25214 5'. Score: 637 Identity: FT 327/329 (99%).~~(16432..16735) T93953 ye06h06.r1 Homo FT sapiens cDNA clone 116987 5' similar to contains HGR FT repetitive element ; Score: 527 Identity: 290/305 FT (95%).~~Additional EST matches: D31115" FT misc_feature complement(3468487..3469151) FT /note="DDS similarity to overlapping ESTs:~(17450..16841) FT N21491 yx58f09.s1 Homo sapiens cDNA clone 265961 3'. Score: FT 1136 Identity: 597/606 (98%).~~(17505..17137) FT F09835|HSC37A092 H. sapiens partial cDNA sequence; clone FT c-37a09. Score: 701 Identity: 361/368 (98%).~~Additional FT EST matches: N35995, T57002, AA493711, AA650030, R39024, FT Z25379, AI093722, AI088818" FT repeat_region complement(3468618..3468734) FT /rpt_family="POLY_A" FT repeat_region complement(3468856..3468892) FT /rpt_family="(GGA)n" FT repeat_region 3469097..3469198 FT /rpt_family="POLY_A" FT repeat_region 3469773..3469943 FT /rpt_family="MER20" FT repeat_region 3470290..3470318 FT /rpt_family="LINE2" FT repeat_region complement(3470355..3470456) FT /rpt_family="LINE2" FT repeat_region 3470500..3470775 FT /rpt_family="AluJo" FT repeat_region complement(3470891..3471145) FT /rpt_family="LINE2" FT misc_feature complement(3471243..3471301) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 3471356..3471634 FT /rpt_family="AluSx" FT repeat_region 3471635..3471802 FT /rpt_family="AluJb" FT repeat_region complement(3471901..3472005) FT /rpt_family="MIR" FT misc_feature complement(3472149..3472214) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 58.000" FT repeat_region 3472557..3472697 FT /rpt_family="AluJo" FT repeat_region 3472698..3472988 FT /rpt_family="AluSx" FT repeat_region 3472993..3473152 FT /rpt_family="AluJo" FT repeat_region 3473204..3473254 FT /rpt_family="Alu" FT repeat_region 3473257..3473479 FT /rpt_family="AluSq" FT repeat_region 3473480..3473525 FT /rpt_family="(GAAA)n" FT repeat_region 3473527..3473848 FT /rpt_family="AluSx" FT repeat_region 3473882..3473999 FT /rpt_family="AluSg/x" FT misc_feature 3474410..3474976 FT /note="DDS similarity to overlapping ESTs:~(22764..23150) FT AA306783 EST177714 Jurkat T-cells VI Homo sapiens cDNA 5' FT end; Score: 770 Identity: 386/387 (99%).~~(22764..23167) FT AA946948 oq54e07.s1 NCI_CGAP_Kid5 Homo sapiens cDNA clone FT IMAGE:1590180 3'; Score: 785 Identity: 404/404 FT (100%).~~(22985..23313) AA758808 ah76b08.s1 Soares testis FT NHT Homo sapiens cDNA clone 1321527 3'; Score: 634 FT Identity: 323/329 (98%).~~(23330..23071) AA336054 EST40775 FT Epididymus Homo sapiens cDNA 5' end; Score: 508 Identity: FT 257/260 (98%)." FT repeat_region complement(3474912..3474992) FT /rpt_family="(GAAA)n" FT repeat_region complement(3475045..3475176) FT /rpt_family="MIR" FT repeat_region 3475185..3475217 FT /rpt_family="(TGGA)n" FT repeat_region 3475364..3475450 FT /rpt_family="(TGGA)n" FT repeat_region 3475452..3475629 FT /rpt_family="(TGGA)n" FT repeat_region 3475663..3475796 FT /rpt_family="(TGAA)n" FT repeat_region 3475812..3475973 FT /rpt_family="(TGGA)n" FT repeat_region 3476052..3476187 FT /rpt_family="(TGAA)n" FT repeat_region 3476216..3476339 FT /rpt_family="(TAGA)n" FT repeat_region 3476361..3476482 FT /rpt_family="(TGGA)n" FT repeat_region 3476737..3476913 FT /rpt_family="(TGGA)n" FT repeat_region 3476976..3477090 FT /rpt_family="(TGAG)n" FT repeat_region 3477091..3477189 FT /rpt_family="(TGGA)n" FT repeat_region 3477190..3477304 FT /rpt_family="(TGGA)n" FT repeat_region 3477305..3477343 FT /rpt_family="(TGGA)n" FT repeat_region 3477344..3477457 FT /rpt_family="(TGAG)n" FT repeat_region 3477481..3477603 FT /rpt_family="(TGGA)n" FT repeat_region complement(3478028..3478101) FT /rpt_family="LINE2" FT misc_feature complement(3478393..3478476) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 80.000" FT CDS complement(join(3478471..3478476,3478816..3478927, FT 3480395..3480455,3482915..3483049,3483200..3483401)) FT /codon_start=1 FT /product="R26529_1" FT /note="Hypothetical human protein with no similarity to FT known proteins" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC33194.1" FT /translation="MPGLAAEGEAEGWSPSPPLYEEYRPPPLDSIRLPRYVLYLLLAAL FT VVVAVAYAIVGHLIKDLAHDLADWAFGPKPDQEAAPRELRPSLTGEDLEGLDLQLALAW FT QGEEDAGGDPGGPSGAGVSAPLPGGGPAGHGASPEAVAGGPGCGSRLPVHRLFGLAGQP FT PLVFQGQG" FT misc_feature complement(3478816..3478927) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 3479723..3479859 FT /rpt_family="(GGA)n" FT repeat_region 3479917..3480052 FT /rpt_family="(GGA)n" FT misc_feature complement(3480395..3480461) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 82.000" FT repeat_region 3480899..3481170 FT /rpt_family="AluJo" FT repeat_region 3481194..3481487 FT /rpt_family="AluJo" FT repeat_region 3482388..3482551 FT /rpt_family="MIR" FT misc_feature complement(3482915..3483049) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 88.000" FT misc_feature complement(3483200..3483401) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 88.000" FT repeat_region 3483578..3483676 FT /rpt_family="LINE2" FT repeat_region complement(3483704..3483916) FT /rpt_family="AluSq" FT repeat_region complement(3484043..3484129) FT /rpt_family="LINE2" FT repeat_region 3484132..3484432 FT /rpt_family="AluSq" FT repeat_region 3484528..3484818 FT /rpt_family="AluJo" FT repeat_region complement(3484829..3485234) FT /rpt_family="LINE2" FT repeat_region complement(3485290..3485603) FT /rpt_family="AluJb" FT repeat_region complement(3485633..3485725) FT /rpt_family="LINE2" FT repeat_region 3485785..3485828 FT /rpt_family="MIR" FT repeat_region 3485931..3486230 FT /rpt_family="AluSg" FT repeat_region 3486249..3486396 FT /rpt_family="FRAM" FT repeat_region complement(3486406..3486426) FT /rpt_family="AT_rich" FT repeat_region complement(3486429..3486726) FT /rpt_family="AluY" FT repeat_region complement(3486740..3486880) FT /rpt_family="AluSg/x" FT repeat_region complement(3486915..3487202) FT /rpt_family="AluSx" FT repeat_region complement(3487206..3487338) FT /rpt_family="LINE2" FT repeat_region 3487382..3487527 FT /rpt_family="MLT1F" FT repeat_region complement(3487561..3487865) FT /rpt_family="AluSx" FT repeat_region complement(3487872..3488006) FT /rpt_family="FLAM_A" FT repeat_region complement(3488040..3488191) FT /rpt_family="MLT1C" FT repeat_region 3488198..3488243 FT /rpt_family="MLT1F" FT repeat_region complement(3488253..3488478) FT /rpt_family="LINE2" FT repeat_region 3488513..3488642 FT /rpt_family="AluSg/x" FT repeat_region 3488644..3488938 FT /rpt_family="AluSx" FT repeat_region 3488939..3489142 FT /rpt_family="AluJo" FT repeat_region 3489147..3489447 FT /rpt_family="AluSg" FT repeat_region 3489448..3489579 FT /rpt_family="AluSq/x" FT repeat_region 3489582..3489872 FT /rpt_family="AluY" FT repeat_region 3489876..3490050 FT /rpt_family="AluSp" FT repeat_region complement(3490093..3490248) FT /rpt_family="MER20" FT misc_feature 3490813..3491697 FT /note="DDS similarity to overlapping ESTs:~(39167..39526) FT AA838566 oe39e07.s1 NCI_CGAP_Pr25 Homo sapiens cDNA clone FT IMAGE:1410948; Score: 679 Identity: 351/359 FT (97%).~~(39180..39692) AA422159 zv31b04.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 755215 5' similar to FT contains element MSR1 repetitive element; Score: 1009 FT Identity: 510/512 (99%).~~(40051..39597) AA293442 FT zt48a09.s1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 725560 3' similar to WP:C14A4.1 CE02138 ; Score: 890 FT Identity: 450/455 (98%). ~~Additional EST matches: R69784, FT AA293509, AA291261, T24681" FT misc_feature complement(3491490..3491809) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 88.000~~DDS similarity FT to ~(40163..40070) AA443087 zx74a02.s1 Soares ovary tumor FT NbHOT Homo sapiens cDNA clone 809450 3' similar to FT WP:C14A4.1 CE02138 ; (94..1); 100% identity." FT CDS complement(join(3491490..3491809,3492260..3492497, FT 3494026..>3494062)) FT /codon_start=2 FT /product="R26529_2, partial CDS" FT /note="Hypothetical human protein most similar to FT Caenorhabditis elegans protein C14A4.1" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC33193.1" FT /translation="ILKQYSSDPVIEVAETCQLAVRRLEWLQQHGGEPAAGPYLSVDPA FT PPAEERDVGRLREALLDESRPLFERYRAMFALRNAGGEEAALALAEGLHCGSALFRHEV FT GYVLGQLQHEAAVPQLAAALARCTENPMVRHECAEALGAIARPACLAALQAHADDPERV FT VRESCEVALDMYEHETGRAFQYADGLEQLRGAPS" FT repeat_region complement(3491867..3491983) FT /rpt_family="FLAM_C" FT misc_feature complement(3492260..3492497) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to AA443087 zx74a02.s1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 809450 3' similar to WP:C14A4.1 FT CE02138 ; (330..95); 98% identity.~~Additional EST matches: FT AI084584" FT repeat_region complement(3492678..3492803) FT /rpt_family="LINE2" FT repeat_region 3493034..3493165 FT /rpt_family="L1MB8" FT repeat_region 3493168..3493296 FT /rpt_family="FLAM_C" FT repeat_region 3493327..3493627 FT /rpt_family="AluY" FT misc_feature complement(3494026..3494062) FT /note="DDS similarity to AA443087 zx74a02.s1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 809450 3' similar to FT WP:C14A4.1 CE02138 ; (367..331); 100% identity." FT repeat_region complement(3497625..3497928) FT /rpt_family="AluJb" FT repeat_region 3497968..3498217 FT /rpt_family="LINE2" FT repeat_region 3498222..3498408 FT /rpt_family="PABL_A" FT repeat_region complement(3498409..3498702) FT /rpt_family="AluSp" FT repeat_region 3498703..3499182 FT /rpt_family="PABL_A" FT repeat_region 3499212..3499478 FT /rpt_family="LINE2" FT repeat_region 3499489..3499789 FT /rpt_family="AluSx" FT repeat_region complement(3499806..3500054) FT /rpt_family="MIR" FT misc_feature 3500406..3500712 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 56.000" FT repeat_region complement(3501118..3501314) FT /rpt_family="LINE2" FT repeat_region 3501315..3501449 FT /rpt_family="AluSq/x" FT repeat_region complement(3501451..3501637) FT /rpt_family="AluSx" FT repeat_region 3501671..3501981 FT /rpt_family="AluSx" FT repeat_region 3501994..3502137 FT /rpt_family="AluJo/FRAM" FT repeat_region 3502160..3502461 FT /rpt_family="AluSx" FT repeat_region complement(3502536..3502660) FT /rpt_family="LINE2" FT repeat_region complement(3502668..3502961) FT /rpt_family="AluY" FT repeat_region complement(3503368..3503563) FT /rpt_family="MLT1C" FT repeat_region complement(3503595..3503892) FT /rpt_family="AluSx" FT repeat_region complement(3504040..3504290) FT /rpt_family="AluSc" FT repeat_region complement(3504307..3504408) FT /rpt_family="L1MB8" FT repeat_region complement(3504413..3504712) FT /rpt_family="AluSx" FT repeat_region complement(3504721..3505175) FT /rpt_family="L1MB7" FT repeat_region complement(3505176..3505478) FT /rpt_family="AluSx" FT repeat_region complement(3505500..3505717) FT /rpt_family="AluSg/x" FT repeat_region 3505725..3505805 FT /rpt_family="LINE2" FT repeat_region complement(3506222..3506289) FT /rpt_family="GC_rich" FT repeat_region 3506358..3506444 FT /rpt_family="(CGG)n" FT repeat_region complement(3506477..3506510) FT /rpt_family="GC_rich" FT repeat_region complement(3508200..3508494) FT /rpt_family="AluSx" FT repeat_region complement(3509472..3509931) FT /rpt_family="L1MB7" FT repeat_region complement(3510134..3510431) FT /rpt_family="AluJb" FT repeat_region 3510746..3510938 FT /rpt_family="MER20" FT repeat_region 3511419..3511562 FT /rpt_family="FLAM_C" FT misc_feature 3511769..3511908 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 55.000" FT repeat_region complement(3512388..3512514) FT /rpt_family="MIR" FT repeat_region 3513441..3513504 FT /rpt_family="MIR" FT misc_feature complement(3514122..3514182) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 58.000" FT repeat_region complement(3514344..3514553) FT /rpt_family="MER20" FT repeat_region 3515485..3515780 FT /rpt_family="AluY" FT repeat_region complement(3516046..3516191) FT /rpt_family="L1MB7" FT misc_feature complement(3516833..3516976) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 58.000" FT repeat_region 3517107..3517398 FT /rpt_family="AluJo" FT repeat_region 3517403..3517706 FT /rpt_family="AluSq" FT repeat_region complement(3517857..3518003) FT /rpt_family="AluJo" FT repeat_region complement(3518011..3518278) FT /rpt_family="AluSx" FT repeat_region complement(3518284..3518358) FT /rpt_family="AluJo" FT repeat_region 3518714..3518874 FT /rpt_family="AluJb" FT repeat_region complement(3520967..3521251) FT /rpt_family="L1ME1" FT repeat_region 3521360..3521504 FT /rpt_family="L1MB3" FT repeat_region complement(3521505..3521797) FT /rpt_family="AluSg" FT repeat_region 3521799..3521852 FT /rpt_family="L1MB2" FT repeat_region complement(3521853..3522013) FT /rpt_family="AluJo/FRAM" FT repeat_region 3522014..3522104 FT /rpt_family="AluJb" FT CDS join(3522988..3523056,3525866..3525991,3526118..3526181, FT 3526257..3526384,3526978..3527060,3527629..3527812, FT 3530790..3530855,3531712..3531814,3531909..3532093, FT 3532415..3532648,3533292..3533396,3534419..3534511, FT 3534793..3534834) FT /codon_start=1 FT /product="R33374_1" FT /note="Hypothetical human protein most similar to fizzy FT related protein; Hypothetical human protein 95% identical FT to (Y14163) fizzy-related protein [Xenopus laevis] and 68% FT identical to Drosophila melanogaster homologue (Y14162)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC62835.1" FT /translation="MDQDYERRLLRQIVIQNENTMPRVTEMRRTLTPASSPVSSPSKHG FT DRFIPSRAGANWSVNFHRINENEKSPSQNRKAKDATSDNGKDGLAYSALLKNELLGAGI FT EKVQDPQTEDRRLQPSTPEKKGLFTYSLSTKRSSPDDGNDVSPYSLSPVSNKSQKLLRS FT PRKPTRKISKIPFKVLDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRL FT CDLSVEGDSVTSVGWSERGNLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNA FT EQLSSGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVW FT NHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTG FT SQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAI FT VTGAGDETLRFWNVFSKTRSTKESVSVLNLFTRIR" FT repeat_region complement(3524582..3525003) FT /rpt_family="MLT1C" FT repeat_region complement(3525439..3525739) FT /rpt_family="AluY" FT misc_feature 3526160..3526181 FT /note="BLASTN similarity to T12230 (4..25); match: 1, FT score: 1.2e-32; database searched: est; A434R Homo sapiens FT cDNA clone A434." FT misc_feature 3526257..3526357 FT /note="BLASTN similarity to T12230 (26..128); match: 0.97, FT score: 1.2e-32; database searched: est; A434R Homo sapiens FT cDNA clone A434." FT repeat_region 3528806..3528992 FT /rpt_family="(TGGA)n" FT repeat_region 3530619..3530740 FT /rpt_family="(TGGA)n" FT repeat_region complement(3532174..3532197) FT /rpt_family="GC_rich" FT misc_feature complement(3533289..3533397) FT /note="BLASTN similarity to AI140392 (303..411); match: FT 0.99, score: 1.1e-70; database searched: month.na; FT qa78a03.x1 Soares_fetal_heart_NbHH19W Homo sapiens cDNA FT clone IMAGE:1692844 3' similar to TR:O42585 O42585 FT FIZZY-RELATED" FT repeat_region 3533939..3534241 FT /rpt_family="AluJo" FT misc_feature complement(3534416..3534512) FT /note="BLASTN similarity to AI140392 (210..306); match: FT 0.98, score: 8.0e-114; database searched: month.na; FT qa78a03.x1 Soares_fetal_heart_NbHH19W Homo sapiens cDNA FT clone IMAGE:1692844 3' similar to TR:O42585 O42585 FT FIZZY-RELATED" FT misc_feature complement(3534791..3535002) FT /note="BLASTN similarity to AI140392 (1..212); match: 0.99, FT score: 8.0e-114; database searched: month.na; qa78a03.x1 FT Soares_fetal_heart_NbHH19W Homo sapiens cDNA clone FT IMAGE:1692844 3' similar to TR:O42585 O42585 FIZZY-RELATED" FT misc_feature complement(3535922..3536182) FT /note="BLASTN similarity to T56726 (1..261); match: 0.97, FT score: 1.5e-95; database searched: est; ya71a07.s2 Homo FT sapiens cDNA clone 67092 3'." FT repeat_region complement(3537961..3538025) FT /rpt_family="LINE2" FT repeat_region complement(3538306..3538750) FT /rpt_family="L1MB5" FT repeat_region complement(3539283..3539312) FT /rpt_family="(GGGA)n" FT repeat_region complement(3539649..3539852) FT /rpt_family="MLT1C" FT repeat_region 3539887..3539932 FT /rpt_family="L1PA8" FT repeat_region 3539947..3540029 FT /rpt_family="AluJ/FLAM" FT repeat_region 3539968..3540083 FT /rpt_family="AluJb" FT repeat_region complement(3540092..3540257) FT /rpt_family="AluSg/x" FT repeat_region complement(3540258..3540552) FT /rpt_family="AluSc" FT repeat_region 3540597..3540887 FT /rpt_family="AluSx" FT repeat_region 3540889..3541184 FT /rpt_family="AluSg" FT repeat_region 3541185..3541342 FT /rpt_family="AluJb" FT repeat_region complement(3541345..3541616) FT /rpt_family="AluSg" FT repeat_region complement(3541812..3542105) FT /rpt_family="AluSx" FT repeat_region complement(3542470..3542779) FT /rpt_family="AluSx" FT misc_feature 3543233..3543678 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 89.000" FT misc_feature complement(3543330..3543471) FT /note="BLASTN similarity to AI138384 (331..472); match: 1, FT score: 9.7e-179; database searched: month.na; qd87d07.x1 FT Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1736461 3', FT mRNA sequence [Homo sapiens]" FT misc_feature complement(3543550..3543678) FT /note="BLASTN similarity to AI138384 (205..333); match: FT 0.99, score: 9.7e-179; database searched: month.na; FT qd87d07.x1 Soares_testis_NHT Homo sapiens cDNA clone FT IMAGE:1736461 3', mRNA sequence [Homo sapiens]" FT misc_feature complement(3543826..3544028) FT /note="BLASTN similarity to AI138384 (3..205); match: 1, FT score: 9.7e-179; database searched: month.na; qd87d07.x1 FT Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1736461 3', FT mRNA sequence [Homo sapiens]" FT misc_feature complement(3544807..3544891) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 78.000" FT repeat_region 3545066..3545558 FT /rpt_family="LINE2" FT repeat_region 3545927..3546047 FT /rpt_family="LINE2" FT misc_feature complement(3546072..3546166) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature complement(3546253..3546423) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(3546611..3546735) FT /rpt_family="MER3" FT repeat_region complement(3546837..3547135) FT /rpt_family="AluY" FT misc_feature complement(3547270..3547362) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 99.000" FT misc_feature complement(3547453..3547545) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(3547846..3548028) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 97.000" FT misc_feature complement(3548105..3548265) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region 3549029..3549153 FT /rpt_family="MIR" FT repeat_region 3549440..3549740 FT /rpt_family="AluSx" FT repeat_region 3549741..3549939 FT /rpt_family="AluSq/x" FT repeat_region 3550038..3550262 FT /rpt_family="MLT1E" FT repeat_region 3550265..3550388 FT /rpt_family="AluJ" FT repeat_region complement(3550390..3550684) FT /rpt_family="AluY" FT repeat_region 3550685..3550870 FT /rpt_family="AluJ" FT misc_feature complement(3550978..3551193) FT /note="BLASTX similarity to 1280135 (117..188); match: FT 0.52, score: 8.4e-19; database searched: nr; (U55376) coded FT for by C. elegans cDNA cm21e6, coded for by C. elegans cDNA FT cm01e2" FT misc_feature complement(3550982..3551192) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 3551751..3552031 FT /rpt_family="LINE2" FT repeat_region complement(3552165..3552465) FT /rpt_family="AluSx" FT repeat_region complement(3552471..3552772) FT /rpt_family="AluSx" FT repeat_region complement(3552830..3552889) FT /rpt_family="MIR" FT repeat_region 3553266..3553305 FT /rpt_family="MIR" FT repeat_region 3553307..3553484 FT /rpt_family="AluJb" FT repeat_region 3553485..3553714 FT /rpt_family="AluY" FT repeat_region 3553727..3553797 FT /rpt_family="POLY_A" FT repeat_region 3553798..3554097 FT /rpt_family="AluSx" FT repeat_region 3554153..3554454 FT /rpt_family="AluSx" FT repeat_region complement(3555114..3555396) FT /rpt_family="AluSx" FT misc_feature complement(3557102..3557149) FT /note="BLASTX similarity to 1280135 (102..117); match: FT 0.43, score: 3.2e-17; database searched: nr; (U55376) coded FT for by C. elegans cDNA cm21e6, coded for by C. elegans cDNA FT cm01e2" FT misc_feature complement(3557104..3557401) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 73.000" FT misc_feature complement(3557159..3557353) FT /note="BLASTX similarity to 1280135 (32..96); match: 0.49, FT score: 3.2e-17; database searched: nr; (U55376) coded for FT by C. elegans cDNA cm21e6, coded for by C. elegans cDNA FT cm01e2" FT repeat_region complement(3557353..3557635) FT /rpt_family="GC_rich" FT repeat_region 3558417..3558714 FT /rpt_family="AluSq" FT repeat_region complement(3558716..3559000) FT /rpt_family="AluJo" FT repeat_region complement(3559031..3559331) FT /rpt_family="AluSx" FT repeat_region 3559355..3559438 FT /rpt_family="AluJ/FRAM" FT repeat_region complement(3559522..3559697) FT /rpt_family="AluSg/x" FT repeat_region complement(3559704..3560005) FT /rpt_family="AluY" FT repeat_region 3560078..3560214 FT /rpt_family="AluJb" FT repeat_region 3560215..3560515 FT /rpt_family="AluSx" FT repeat_region 3560837..3560960 FT /rpt_family="AluSq/x" FT repeat_region 3560962..3561256 FT /rpt_family="AluSg" FT repeat_region 3561382..3561596 FT /rpt_family="AluJo" FT repeat_region complement(3561670..3561691) FT /rpt_family="AT_rich" FT repeat_region complement(3561692..3561900) FT /rpt_family="AluJo" FT repeat_region complement(3561959..3562255) FT /rpt_family="AluSx" FT repeat_region complement(3562258..3562366) FT /rpt_family="MIR" FT repeat_region complement(3562578..3562858) FT /rpt_family="AluSg" FT repeat_region complement(3562866..3563163) FT /rpt_family="AluSx" FT repeat_region complement(3563174..3563470) FT /rpt_family="AluY" FT repeat_region complement(3563480..3563613) FT /rpt_family="AluJb" FT repeat_region 3564422..3564464 FT /rpt_family="MIR" FT repeat_region 3564508..3564798 FT /rpt_family="AluSx" FT repeat_region 3564800..3564968 FT /rpt_family="AluSg/x" FT repeat_region complement(3565004..3565305) FT /rpt_family="AluSg" FT repeat_region complement(3565321..3565531) FT /rpt_family="MER49" FT repeat_region complement(3565532..3565835) FT /rpt_family="AluSx" FT repeat_region complement(3565887..3566012) FT /rpt_family="MER20" FT repeat_region complement(3566065..3566160) FT /rpt_family="MIR" FT repeat_region 3566494..3566792 FT /rpt_family="AluY" FT repeat_region 3566831..3567118 FT /rpt_family="AluSg" FT repeat_region 3567122..3567289 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(3567416..3567546) FT /rpt_family="FLAM_C" FT repeat_region complement(3567561..3567861) FT /rpt_family="AluSx" FT repeat_region complement(3567873..3568054) FT /rpt_family="AluSx" FT misc_feature complement(3568115..3568273) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 68.000" FT misc_feature complement(3568118..3568273) FT /note="BLASTX similarity to 337518 (141..192); match: 0.94, FT score: 2.0e-29; database searched: nr; (M77233) ribosomal FT protein [Homo sapiens]" FT repeat_region complement(3568335..3568627) FT /rpt_family="AluSg" FT repeat_region complement(3568628..3568762) FT /rpt_family="AluSx" FT repeat_region 3568808..3569252 FT /rpt_family="MLT1C" FT repeat_region complement(3569253..3569302) FT /rpt_family="(CA)n" FT repeat_region 3569330..3569627 FT /rpt_family="AluSx" FT repeat_region 3569633..3569935 FT /rpt_family="AluY" FT repeat_region 3570200..3570508 FT /rpt_family="AluSx" FT repeat_region complement(3570535..3570567) FT /rpt_family="L1MA2" FT repeat_region complement(3570746..3571088) FT /rpt_family="L1MB8" FT repeat_region complement(3571089..3571381) FT /rpt_family="AluSx" FT repeat_region complement(3571383..3571639) FT /rpt_family="L1MB8" FT repeat_region complement(3571758..3571812) FT /rpt_family="LINE2" FT repeat_region 3571815..3572105 FT /rpt_family="AluSg1" FT repeat_region complement(3572894..3572943) FT /rpt_family="GC_rich" FT misc_feature 3573182..3573345 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 83.000" FT misc_feature 3573690..3573798 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT mRNA join(3574522..3574584,3575538..3575658,3576259..3576305, FT 3576551..3576623,3576890..3577105,3577979..3578111, FT 3578507..3579041) FT /product="Homo sapiens Sox-like transcriptional factor FT mRNA" FT CDS join(3574540..3574584,3575538..3575658,3576259..3576305, FT 3576551..3576623,3576890..3577105,3577979..3578111, FT 3578507..3578519) FT /codon_start=1 FT /product="R31109_1" FT /note="Most similar to Sox-like transcription factor; FT Seqeunce differences between genomic and cDNA sequences FT encoding Sox-like transcription factor result in shorter FT translation from genomic sequence than product represented FT by accession AF072836. Genomic sequence data is well FT represented on both strands and appears to result in the FT correct translation" FT /protein_id="AAC62837.1" FT /translation="MLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCT FT EKIQEKKIKKEDSSSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELRRL FT RKMNVAFEEQNAVLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTASFAS FT LPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVASEHL" FT repeat_region complement(3574715..3575016) FT /rpt_family="AluSx" FT repeat_region 3575667..3575961 FT /rpt_family="AluSx" FT repeat_region complement(3577149..3577271) FT /rpt_family="POLY_G" FT repeat_region complement(3578118..3578144) FT /rpt_family="GC_rich" FT repeat_region complement(3594068..3594371) FT /rpt_family="AluSp" FT repeat_region complement(3594372..3594506) FT /rpt_family="AluSx" FT mRNA complement(3594778..3600717) FT /product="Human alternatively spliced endothelial FT thromboxane A2 receptor mRNA" FT gene complement(3594832..3606730) FT /gene="TBXA2R" FT /note="THROMBOXANE A2 RECEPTOR" FT CDS complement(join(3594834..3595074,3595735..3595931, FT 3599847..3600632)) FT /codon_start=1 FT /gene="TBXA2R" FT /product="TA2R_HUMAN, BETA ISOFORM" FT /note="THROMBOXANE A2 RECEPTOR, ISOFORM BETA; Sequence FT difference between genomic and cDNA sequences (extra C at FT base 11251 of this accession) results in longer conceptual FT translation of TXA2-R, beta isoform when derived from FT genomic sequence as compared to the published cDNA sequence FT (402 aa vs 369 aa); PROSTANOID TP RECEPTOR" FT /protein_id="AAC24302.1" FT /translation="MWPNGSSLGPCFRPTNITLEERRLIASPWFAASFCVVGLASNLLA FT LSVLAGARQGGSHTRSSFLTFLCGLVLTDFLGLLVTGTIVVSQHAALFEWHAVDPGCRL FT CRFMGVVMIFFGLSPLLLGAAMASERYLGITRPFSRPAVASQRRAWATVGLVWAAALAL FT GLLPLLGVGRYTVQYPGSWCFLTLGAESGDVAFGLLFSMLGGLSVGLSFLLNTVSVATL FT CHVYHGQEAAQQRPRDSEVEMMAQLLGIMVVASVCWLPLLVFIAQTVLRNPPAMSPAGQ FT LSRTTEKELLIYLRVATWNQILDPWVYILFRRAVLRRLQPRLSTRPRRSLTLWPSLEYS FT GTISAHCNLRLPGSSDSRASASRAAGITGVSHCARPCMLFDPEFDLLAGVQLLPFEPPT FT GKALSRKD" FT repeat_region 3594932..3595093 FT /rpt_family="AluSg/x" FT repeat_region 3595095..3595386 FT /rpt_family="AluSx" FT misc_feature 3595479..3595920 FT /gene="TBXA2R" FT /note="DDS similarity to AA039960 zk45a05.r1 Soares FT pregnant uterus NbHPU Homo sapiens cDNA clone 485744 5' FT similar to gb:D38081 THROMBOXANE A2 RECEPTOR (HUMAN); FT (12..459); 94% identity." FT mRNA complement(3595686..3606730) FT /gene="TBXA2R" FT /product="Thromoxane A2 receptor" FT CDS complement(join(3595686..3595931,3599847..3600632)) FT /codon_start=1 FT /gene="TBXA2R" FT /product="TA2R_HUMAN" FT /note="THROMBOXANE A2 RECEPTOR; TXA2-R; PROSTANOID TP FT RECEPTOR" FT /protein_id="AAC24303.1" FT /translation="MWPNGSSLGPCFRPTNITLEERRLIASPWFAASFCVVGLASNLLA FT LSVLAGARQGGSHTRSSFLTFLCGLVLTDFLGLLVTGTIVVSQHAALFEWHAVDPGCRL FT CRFMGVVMIFFGLSPLLLGAAMASERYLGITRPFSRPAVASQRRAWATVGLVWAAALAL FT GLLPLLGVGRYTVQYPGSWCFLTLGAESGDVAFGLLFSMLGGLSVGLSFLLNTVSVATL FT CHVYHGQEAAQQRPRDSEVEMMAQLLGIMVVASVCWLPLLVFIAQTVLRNPPAMSPAGQ FT LSRTTEKELLIYLRVATWNQILDPWVYILFRRAVLRRLQPRLSTRPRSLSLQPQLTQRS FT GLQ" FT misc_feature complement(3595847..3595931) FT /gene="TBXA2R" FT /note="DDS similarity to AA039932 zk45a05.s1 Soares FT pregnant uterus NbHPU Homo sapiens cDNA clone 485744 3' FT similar to gb:D38081 THROMBOXANE A2 RECEPTOR FT (HUMAN);~(320..412); 81% identity." FT repeat_region 3595957..3596000 FT /rpt_family="GC_rich" FT repeat_region complement(3596027..3596327) FT /rpt_family="AluSx" FT repeat_region 3596336..3596389 FT /rpt_family="MIR" FT repeat_region 3596430..3596633 FT /rpt_family="AluJb" FT repeat_region complement(3596662..3596878) FT /rpt_family="AluY" FT repeat_region complement(3596879..3596915) FT /rpt_family="AT_rich" FT repeat_region complement(3596940..3597238) FT /rpt_family="AluSp" FT repeat_region complement(3597260..3597411) FT /rpt_family="(TAA)n" FT repeat_region 3597423..3597645 FT /rpt_family="AluSg/x" FT repeat_region 3597649..3597944 FT /rpt_family="AluY" FT repeat_region complement(3598221..3598267) FT /rpt_family="LINE2" FT repeat_region complement(3598269..3598304) FT /rpt_family="MER58A" FT repeat_region complement(3598308..3598346) FT /rpt_family="(GAAAA)n" FT repeat_region complement(3598347..3598649) FT /rpt_family="AluSx" FT repeat_region complement(3598666..3598965) FT /rpt_family="AluSc" FT repeat_region complement(3598979..3599143) FT /rpt_family="MER58B" FT repeat_region complement(3599149..3599327) FT /rpt_family="AluJo" FT repeat_region complement(3599328..3599627) FT /rpt_family="AluY" FT repeat_region complement(3599629..3599764) FT /rpt_family="AluSq/x" FT misc_feature complement(3599778..3600632) FT /gene="TBXA2R" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 91.000" FT misc_feature complement(3599847..3600161) FT /gene="TBXA2R" FT /note="DDS similarity to AA039932 zk45a05.s1 Soares FT pregnant uterus NbHPU Homo sapiens cDNA clone 485744 3' FT similar to gb:D38081 THROMBOXANE A2 RECEPTOR FT (HUMAN);~(1..319); 96% identity." FT repeat_region complement(3600140..3600217) FT /rpt_family="GC_rich" FT repeat_region complement(3600825..3601051) FT /rpt_family="AluJb" FT repeat_region 3601246..3601533 FT /rpt_family="AluJo" FT repeat_region 3601643..3601936 FT /rpt_family="AluSx" FT repeat_region 3601938..3602238 FT /rpt_family="AluY" FT repeat_region 3602453..3602778 FT /rpt_family="AluSq" FT repeat_region 3602793..3603048 FT /rpt_family="AluY" FT misc_feature complement(3603057..3603513) FT /gene="TBXA2R" FT /note="BLASTN similarity to D15054 (1..457); match: 0.94, FT score: 1.7e-166; database searched: nt; Human gene for FT thromboxane A2 receptor, exon 1b (promoter region II)" FT repeat_region 3604653..3604700 FT /rpt_family="MIR" FT repeat_region 3605369..3605513 FT /rpt_family="(CAGA)n" FT repeat_region 3605519..3605569 FT /rpt_family="(CAGA)n" FT repeat_region 3605577..3605720 FT /rpt_family="(CAGA)n" FT repeat_region 3605733..3605851 FT /rpt_family="(CA)n" FT repeat_region 3605852..3605982 FT /rpt_family="(CAGA)n" FT repeat_region 3606001..3606125 FT /rpt_family="(CA)n" FT misc_feature 3606047..3606322 FT /gene="TBXA2R" FT /note="BLASTN similarity to Z56415 (1..277); match: 0.93, FT score: 9.0e-90; database searched: nt; H.sapiens CpG DNA, FT clone 117c11, reverse read cpg117c11.rt1a ." FT misc_feature 3606047..3606390 FT /gene="TBXA2R" FT /note="BLASTN similarity to cpg256c1.rt1a (1..346); match: FT 0.99, score: 3.6e-128; database searched: Sanger CpG; bases FT 66 to 424 (SL to QR)" FT misc_feature complement(3606516..3607673) FT /note="BLASTN similarity to D15053 (11..1137); match: 0.92, FT score: 0.0; database searched: nt; Human gene for FT thromboxane A2 receptor, exon 1 (promoter region I)" FT misc_feature complement(3607017..3607297) FT /note="BLASTN similarity to cpg256c1.ft1a (1..282); match: FT 0.86, score: 4.8e-99; database searched: Sanger CpG; bases FT 109 to 400 (SL to QR)" FT repeat_region complement(3608585..3608666) FT /rpt_family="MIR" FT repeat_region complement(3608753..3608781) FT /rpt_family="GC_rich" FT repeat_region 3609520..3609637 FT /rpt_family="MIR" FT repeat_region 3609755..3609801 FT /rpt_family="AluJb" FT repeat_region complement(3610217..3610345) FT /rpt_family="MER20" FT misc_feature 3610622..3611054 FT /note="DDS similarity to overlapping ESTs:~(26970..27195) FT R39437 yc95a07.s1 Homo sapiens cDNA clone 23606 3'. Score: FT 391 Identity: 212/225 (94%).~~(26984..27399) R39951 FT yf52g09.s1 Homo sapiens cDNA clone 25915 3'.Score: 713 FT Identity: 402/425 (94%)~ ~(26993..27228) AA348001 EST54391 FT Fetal heart II Homo sapiens cDNA 3' end; Score: 468 FT Identity: 235/236 (99%).~~(26997..27402) AA505656 FT nh82b11.s1 NCI_CGAP_Br1.1 Homo sapiens cDNA clone FT IMAGE:964989; Score: 804 Identity: 404/406 FT (99%).~~Additional matches:~AA975150, AI004052" FT CDS complement(join(3610665..3611074,3611227..3611351, FT 3611925..3612411,3613056..3613363,3613462..3613584, FT 3614395..3614587,3618873..3618987,3619078..3619240, FT 3620125..3620270,3620705..3620800,3623686..>3623963)) FT /codon_start=3 FT /product="R31449_3" FT /note="Hypothetical partial protein; Most similar to FT YB3C_SCHPO HYPOTHETICAL 60.9 KD PROTEIN C2F12.12C IN FT CHROMOSOME II gnl|PID|e325370 (Z97211) hypothetical protein FT [Schizosaccharomyces pombe]" FT /protein_id="AAC24305.1" FT /translation="RSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKR FT ARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEE FT KELKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQED FT NFHLQQAKLRSKIRIRDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDL FT LEDIQVYMELEQGKNADFWRDMTTITEDEISKLRKLEASGKGPGERREGVNASVSSDVQ FT SVFKGKTYNQLQVIFQGIEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLR FT QKLYKLKQEQGVESEPLFPILKQEPQSPSRSLEPEDAAPTPPGPSSEGGPAEAEVDGAT FT PTEGDGDGDGEGEGEGEAVLMEEDLIQQSLDDYDAGRYSPRLLTAHELPLDAHVLEPDE FT DLQRLQLSRQQLQVTGDASESAEDIFFRRAKEGMGQDEAQFSVEMPLTGKAYLWADKYR FT PRKPRFFNRVHTGFEWNKYNQTHYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEA FT CADNKDFAILRFHAGPPYEDIAFKIVNREWEYSHRHGFRCQFANGIFQLWFHFKRYRYR FT RPGPCWRPIRHCRRDPLWTPTLCRDWPPTHPVLAGGVHFPAAGIPPPGLLTGPWSMRPV FT TPSFAHIRTVAPSHSPFSGQEGRGPHGCHSPGRSGPAGRLVLQHPTGTSPTEAKRKVPP FT GPPEGHPTSPVTSPRPPTAPPRHPASSGNSSVCFSKKTCRWEKKSFVLMELAYWQDRMF FT F" FT repeat_region complement(3611731..3611777) FT /rpt_family="MIR" FT misc_feature complement(3611925..3612411) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 94.000" FT misc_feature complement(3613056..3613363) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 91.000" FT repeat_region complement(3613296..3613348) FT /rpt_family="GC_rich" FT misc_feature complement(3613462..3613584) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 94.000" FT misc_feature complement(3614395..3614587) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 3614995..3615100 FT /rpt_family="MIR" FT repeat_region 3616275..3616324 FT /rpt_family="L1PB1" FT repeat_region 3616327..3616619 FT /rpt_family="AluSc" FT repeat_region 3616620..3616670 FT /rpt_family="L1PB1" FT repeat_region 3616713..3616829 FT /rpt_family="AluJ" FT repeat_region 3616840..3617128 FT /rpt_family="AluSc" FT repeat_region 3617129..3617295 FT /rpt_family="AluJ" FT repeat_region 3618187..3618377 FT /rpt_family="MER20" FT misc_feature complement(3618873..3618987) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature complement(3619078..3619240) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature complement(3620125..3620270) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(3620705..3620800) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 99.000" FT repeat_region complement(3621736..3621873) FT /rpt_family="LINE2" FT repeat_region 3622082..3622381 FT /rpt_family="AluSx" FT repeat_region 3622386..3622744 FT /rpt_family="MLT1C" FT repeat_region 3622952..3623242 FT /rpt_family="AluJb" FT repeat_region 3623246..3623536 FT /rpt_family="AluY" FT misc_feature complement(3623686..3623963) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 96.000" FT repeat_region complement(3623862..3623922) FT /rpt_family="(CAG)n" FT repeat_region complement(3624203..3624659) FT /rpt_family="LINE2" FT repeat_region complement(3624900..3624950) FT /rpt_family="Alu" FT repeat_region complement(3624900..3625189) FT /rpt_family="AluJo" FT repeat_region 3625446..3625744 FT /rpt_family="AluSx" FT repeat_region 3625995..3626378 FT /rpt_family="LINE2" FT repeat_region complement(3626571..3626663) FT /rpt_family="(CGG)n" FT repeat_region complement(3627411..3627457) FT /rpt_family="MIR" FT repeat_region 3627760..3628059 FT /rpt_family="AluSx" FT repeat_region 3628081..3628373 FT /rpt_family="AluSg" FT repeat_region 3628645..3628943 FT /rpt_family="AluSx" FT repeat_region complement(3629044..3629231) FT /rpt_family="AluSg/x" FT repeat_region 3629486..3629785 FT /rpt_family="AluSx" FT repeat_region 3629790..3630087 FT /rpt_family="AluY" FT misc_feature 3630179..3631858 FT /note="DDS similarity to overlapping ESTs:~(13795..14230) FT AA621023 ag03c09.s1 Soares testis NHT Homo sapiens cDNA FT clone 1056208 3'; Score: 856 Identity: 432/436 FT (99%).~~(13795..14267) AI018772 ov32e07.x1 FT Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1639044 3' FT similar to contains TAR1.t3 PTR5 repetitive element ; FT Score: 938 Identity: 471/473 (99%).~~(14560..14100) FT AA128938 zo11b12.r1 Stratagene neuroepithelium NT2RAMI FT 937234 Homo sapiens cDNA clone 567359 5'; Score: 886 FT Identity: 453/459 (98%).~~(14913..14564) W94459 ze12e03.r1 FT Soares fetal heart NbHH19W Homo sapiens cDNA clone 358780 FT 5'. Score: 668 Identity: 345/350 (98%). ~~(15439..14978) FT R35135 yg60e12.r1 Homo sapiens cDNA clone 36877 5'. Score: FT 766 Identity: 447/476 (93%).~~(15474..15189) AA323207 FT EST25973 Cerebellum II Homo sapiens cDNA 5' end; Score: 530 FT Identity: 278/284 (97%).~~Additional EST FT matches:~AA975069, AA128939, AA524185, AA482347, H67626, FT H73320, M78980, and many others..." FT mRNA complement(3630182..>3653587) FT /product="Homo sapiens mRNA for KIAA0589 protein" FT /note="Encodes human homolog of mouse FT phosphatidylinositol-4-phosphate 5-kinase I-gamma" FT misc_feature complement(3632029..3632465) FT /note="DDS similarity to overlapping ESTs:~(15842..15645) FT Z42707|HSC0RG021 H. sapiens partial cDNA sequence; clone FT c-0rg02. Score: 388 Identity: 196/198 FT (98%).~~(15884..15653) T31546 EST34519 Homo sapiens cDNA 5' FT end similar to None; Score: 448 Identity: 228/232 FT (98%).~~(16081..15693) AA446775 zw89d06.r1 Soares total FT fetus Nb2HF8 9w Homo sapiens cDNA clone 784139 5'; Score: FT 720 Identity: 377/387 (97%).~~~" FT misc_feature 3632546..3633137 FT /note="DDS similarity to AA527155 ni07c01.s1 NCI_CGAP_Br2 FT Homo sapiens cDNA clone IMAGE:967296; Score: 958 Identity: FT 546/592 (92%)." FT CDS complement(join(3633165..3633167,3633435..3633518, FT 3638882..3639014,3641703..3641807,3642905..3642937, FT 3643241..3643379,3644085..3644249,3645972..3646056, FT 3647336..3647384,3648623..3648706,3651824..3652029, FT 3653288..>3653587)) FT /codon_start=1 FT /product="KIAA0589, partial CDS" FT /function="putative lipid kinase" FT /note="Human homolog of mouse phosphatidylinositol- FT 4-phosphate 5-kinase I-gamma" FT /protein_id="AAC32904.1" FT /translation="NLNQNPRTLLPKFYGLYCVQSGGKNIRVVVMNNILPRVVKMHLKF FT DLKGSTYKRRASKKEKEKSFPTYKDLDFMQDMPEGLLLDADTFSALVKTLQRDCLVLES FT FKIMDYSLLLGVHNIDQHERERQAQGAQSTSDEKRPVGQKALYSTAMESIQGGAARGEA FT IESDDTMGGIPAVNGRGERLLLHIGIIDILQSYRFIKKLEHTWKALVHDGDTVSVHRPS FT FYAERFFKFMSNTVFRKNSSLKSSPSKKGRGGALLAVKPLGPTAAFSASQIPSEREEAQ FT YDLRGARSYPTLEDEGRPDLLPCTPPSFEEATTASIATTLSSTSLSIPERSPSETSEQP FT RYRRRTQSSGQDGRPQEEPPAEEDLQQITVQVEPACSVEIVVPKEEDAGVEASPAGASA FT AVEVETASQASDEEGAPASQASDEEDAPATDIYFPTDERSWVYSPLHYSAQAPPASDGE FT SDT" FT misc_feature complement(3634501..3634566) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 52.000" FT misc_feature complement(3635117..3635237) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 68.000" FT repeat_region 3635263..3635398 FT /rpt_family="AluSx" FT repeat_region 3635400..3635695 FT /rpt_family="AluSx" FT repeat_region 3635696..3635997 FT /rpt_family="AluY" FT repeat_region 3636002..3636174 FT /rpt_family="AluSx" FT repeat_region 3636700..3636740 FT /rpt_family="LINE2" FT misc_feature complement(3637534..3637611) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 64.000" FT misc_feature complement(3638814..3639014) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 76.000" FT repeat_region 3639316..3639401 FT /rpt_family="MIR" FT repeat_region complement(3639426..3639727) FT /rpt_family="AluJb" FT repeat_region complement(3639739..3639865) FT /rpt_family="MIR" FT repeat_region 3640232..3640530 FT /rpt_family="AluSx" FT repeat_region 3640642..3640690 FT /rpt_family="AluSq" FT repeat_region complement(3640691..3640984) FT /rpt_family="AluY" FT repeat_region 3640986..3641231 FT /rpt_family="AluSq" FT repeat_region 3641235..3641292 FT /rpt_family="(TAAAA)n" FT repeat_region complement(3641333..3641546) FT /rpt_family="MER20" FT misc_feature complement(3641703..3641807) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(3642980..3643050) FT /rpt_family="(CAGG)n" FT misc_feature complement(3643241..3643379) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 67.000" FT repeat_region 3643681..3643777 FT /rpt_family="LINE2" FT misc_feature complement(3644085..3644249) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 3644988..3645072 FT /rpt_family="MER63A" FT repeat_region complement(3645678..3645792) FT /rpt_family="MIR" FT misc_feature complement(3645916..3646056) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 97.000" FT repeat_region 3646865..3647078 FT /rpt_family="(GGAA)n" FT repeat_region 3647093..3647184 FT /rpt_family="(GGGA)n" FT repeat_region 3647198..3647321 FT /rpt_family="(GGA)n" FT misc_feature complement(3647286..3647384) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 3647442..3647631 FT /rpt_family="MER20" FT repeat_region 3647664..3647963 FT /rpt_family="AluSx" FT repeat_region complement(3648018..3648315) FT /rpt_family="AluJo" FT misc_feature complement(3648566..3648706) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 3648940..3648995 FT /rpt_family="(CA)n" FT repeat_region 3650452..3650583 FT /rpt_family="MER20" FT repeat_region complement(3650758..3651052) FT /rpt_family="AluSq" FT repeat_region complement(3651054..3651353) FT /rpt_family="AluJb" FT misc_feature complement(3651824..3652029) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(3652763..3652794) FT /rpt_family="MIR" FT repeat_region complement(3652976..3653100) FT /rpt_family="FLAM_C" FT misc_feature complement(3653288..3653587) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 3653950..3654006 FT /rpt_family="(CA)n" FT repeat_region complement(3654011..3654151) FT /rpt_family="AluJb" FT repeat_region complement(3654433..3654531) FT /rpt_family="MER58B" FT repeat_region 3654532..3654593 FT /rpt_family="AluS" FT mRNA complement(<3660964..3700445) FT /product="KIAA00589" FT /note="KIAA0589 transcript isolated from brain. Appears FT homologous to mouse phosphatidylinositol-4-phosphate FT 5-kinase I-gamma, with similarity to many other FT phosphatidylinositol-4-phosphate 5-kinase isoforms." FT CDS complement(join(<3660964..3661081,3661869..3661999, FT 3664820..3664912,3667320..3667351,3700295..3700388)) FT /codon_start=1 FT /product="KIAA0589" FT /note="Human homolog of mouse FT phosphatidylinositol-4-phosphate 5-kinase I-gamma; Human FT homolog is 89% identical to PID|d1026596 (AB006916) FT phosphatidylinositol-4-phosphate 5-kinase I-gamma [Mus FT musculus] over residues 1 to 156" FT /protein_id="AAC15471.1" FT /translation="MELEVPDEAESAEAGAVPSEAAWAAESGAAAGLAQKKAAPTEVLS FT MTAQPGPGHGKKLGHRGVDASGETTYKKTTSSTLKGAIQLGIGYTVGHLSSKPERDVLM FT QDFYVVESIFFPSEGSNLTPAHHFQDFRFKTYAPVAFRYFRELFGIRPDDYL" FT misc_feature 3662218..3662345 FT /note="DDS similarity to AA412577 zt95f09.r1 Soares testis FT NHT Homo sapiens cDNA clone 730121 5'. Score: 231 Identity: FT 131/135 (97%)." FT repeat_region 3662448..3662518 FT /rpt_family="MIR" FT repeat_region complement(3662562..3662862) FT /rpt_family="AluSx" FT repeat_region complement(3662866..3663163) FT /rpt_family="AluSx" FT repeat_region 3663441..3663537 FT /rpt_family="L1MB7" FT repeat_region 3663538..3663664 FT /rpt_family="AluJb" FT repeat_region 3663669..3664378 FT /rpt_family="L1MB7" FT repeat_region complement(3665213..3665382) FT /rpt_family="MER20" FT repeat_region 3666460..3666577 FT /rpt_family="(CA)n" FT repeat_region 3666585..3666703 FT /rpt_family="(CA)n" FT repeat_region 3666718..3666829 FT /rpt_family="(CA)n" FT repeat_region complement(3667207..3667250) FT /rpt_family="MIR" FT repeat_region 3668431..3668603 FT /rpt_family="MLT1D" FT repeat_region 3670218..3670633 FT /rpt_family="MLT1C" FT repeat_region 3673139..3673327 FT /rpt_family="LINE2" FT repeat_region 3674213..3674338 FT /rpt_family="MLT1D" FT repeat_region complement(3674339..3674411) FT /rpt_family="AluSp/q" FT repeat_region complement(3674414..3674486) FT /rpt_family="AluSc" FT repeat_region complement(3674489..3674561) FT /rpt_family="AluSc" FT repeat_region complement(3674564..3674798) FT /rpt_family="AluSc" FT repeat_region 3674888..3675253 FT /rpt_family="L1MB7" FT repeat_region complement(3675735..3675916) FT /rpt_family="MER20" FT repeat_region complement(3676066..3676101) FT /rpt_family="MIR" FT repeat_region 3676846..3677119 FT /rpt_family="AluJo" FT repeat_region 3677296..3677593 FT /rpt_family="AluSx" FT repeat_region 3677688..3677768 FT /rpt_family="(GGGA)n" FT repeat_region 3677774..3677912 FT /rpt_family="(GGGA)n" FT repeat_region 3677898..3678071 FT /rpt_family="(TGGA)n" FT repeat_region 3678090..3678219 FT /rpt_family="(GGGA)n" FT repeat_region 3678200..3678300 FT /rpt_family="(TGGAA)n" FT repeat_region 3678281..3678398 FT /rpt_family="(TGGA)n" FT repeat_region 3678462..3678638 FT /rpt_family="(TGGA)n" FT repeat_region 3678680..3678798 FT /rpt_family="(GGGA)n" FT repeat_region 3678833..3679010 FT /rpt_family="(TGGA)n" FT repeat_region 3679872..3679914 FT /rpt_family="LINE2" FT repeat_region complement(3680185..3680222) FT /rpt_family="(TGGA)n" FT repeat_region complement(3680303..3680597) FT /rpt_family="AluSx" FT repeat_region 3680722..3680753 FT /rpt_family="MER58B" FT repeat_region complement(3681231..3681529) FT /rpt_family="AluSx" FT repeat_region complement(3681620..3681693) FT /rpt_family="MIR" FT repeat_region 3682090..3682387 FT /rpt_family="AluSx" FT repeat_region 3682397..3682703 FT /rpt_family="AluJo" FT repeat_region 3682722..3682883 FT /rpt_family="MLT1F" FT repeat_region 3682926..3683125 FT /rpt_family="LINE2" FT repeat_region complement(3683517..3683673) FT /rpt_family="MIR" FT repeat_region complement(3683687..3683809) FT /rpt_family="LINE2" FT repeat_region 3685447..3685742 FT /rpt_family="AluY" FT repeat_region complement(3685743..3685863) FT /rpt_family="MER58A" FT repeat_region complement(3685870..3686141) FT /rpt_family="AluJo" FT repeat_region 3686196..3686434 FT /rpt_family="AluY" FT repeat_region 3686435..3686736 FT /rpt_family="AluSp" FT repeat_region 3686749..3686904 FT /rpt_family="L1" FT repeat_region 3686909..3687210 FT /rpt_family="AluSx" FT repeat_region 3687211..3687372 FT /rpt_family="AluSg/x" FT repeat_region 3687480..3687619 FT /rpt_family="(CA)n" FT repeat_region complement(3688475..3688727) FT /rpt_family="MER82" FT repeat_region 3688728..3688775 FT /rpt_family="(GA)n" FT repeat_region complement(3689041..3689187) FT /rpt_family="FRAM" FT repeat_region complement(3689192..3689358) FT /rpt_family="MER82" FT repeat_region 3689367..3689666 FT /rpt_family="AluSg" FT repeat_region 3689753..3689838 FT /rpt_family="(CA)n" FT repeat_region 3689850..3689968 FT /rpt_family="L1MC4" FT repeat_region 3690213..3690498 FT /rpt_family="AluJo" FT repeat_region complement(3691296..3691624) FT /rpt_family="MER74" FT repeat_region complement(3691624..3691693) FT /rpt_family="MER74" FT repeat_region complement(3692087..3692203) FT /rpt_family="MIR" FT repeat_region 3692397..3692968 FT /rpt_family="LINE2" FT repeat_region 3693790..3693921 FT /rpt_family="AluJo" FT repeat_region 3693929..3694229 FT /rpt_family="AluY" FT repeat_region 3694880..3695076 FT /rpt_family="MER58A" FT repeat_region complement(3695728..3696028) FT /rpt_family="AluJo" FT repeat_region 3696181..3696232 FT /rpt_family="LINE2" FT repeat_region complement(3696267..3696951) FT /rpt_family="LINE2" FT repeat_region complement(3697535..3697639) FT /rpt_family="LINE2" FT repeat_region 3698517..3698640 FT /rpt_family="MER20" FT repeat_region complement(3699408..3699435) FT /rpt_family="(CGGG)n" FT repeat_region complement(3700182..3700290) FT /rpt_family="GC_rich" FT repeat_region complement(3700295..3700409) FT /rpt_family="(CGG)n" FT repeat_region complement(3700459..3700572) FT /rpt_family="GC_rich" FT repeat_region 3700877..3701166 FT /rpt_family="AluSx" FT repeat_region 3701687..3701976 FT /rpt_family="AluY" FT repeat_region 3702182..3702249 FT /rpt_family="(TA)n" FT repeat_region complement(3702252..3702547) FT /rpt_family="AluSg" FT repeat_region 3702684..3703017 FT /rpt_family="AluJo" FT repeat_region 3703022..3703266 FT /rpt_family="L1MB3" FT repeat_region 3703267..3703567 FT /rpt_family="AluSx" FT repeat_region 3703605..3703895 FT /rpt_family="AluSx" FT repeat_region complement(3703939..3704225) FT /rpt_family="AluSx" FT repeat_region 3704322..3704396 FT /rpt_family="MER5A" FT repeat_region 3704401..3704549 FT /rpt_family="AluJo" FT repeat_region 3704550..3704844 FT /rpt_family="AluSp" FT repeat_region 3704845..3705009 FT /rpt_family="AluJo" FT repeat_region 3705015..3705063 FT /rpt_family="MER5A" FT repeat_region 3705156..3705459 FT /rpt_family="AluSx" FT repeat_region 3705460..3705581 FT /rpt_family="MER5A" FT repeat_region 3705724..3706027 FT /rpt_family="AluSx" FT repeat_region complement(3706304..3706424) FT /rpt_family="LINE2" FT repeat_region complement(3706426..3706721) FT /rpt_family="AluSx" FT repeat_region complement(3706740..3706878) FT /rpt_family="AluJb" FT repeat_region complement(3706891..3707056) FT /rpt_family="AluJ" FT repeat_region 3707071..3707374 FT /rpt_family="AluSx" FT repeat_region 3707378..3707431 FT /rpt_family="(CAA)n" FT repeat_region 3707442..3707747 FT /rpt_family="AluSx" FT repeat_region complement(3707760..3707882) FT /rpt_family="AluJ" FT repeat_region complement(3707891..3707958) FT /rpt_family="MIR" FT repeat_region complement(3709109..3709391) FT /rpt_family="AluSq" FT repeat_region 3709821..3709864 FT /rpt_family="MIR" FT repeat_region 3709866..3710165 FT /rpt_family="AluSg" FT repeat_region complement(3710693..3710832) FT /rpt_family="LINE2" FT repeat_region complement(3710900..3711196) FT /rpt_family="AluY" FT repeat_region complement(3711197..3711496) FT /rpt_family="AluSx" FT repeat_region 3711609..3711739 FT /rpt_family="AluSg" FT repeat_region complement(3711839..3711982) FT /rpt_family="FLAM_C" FT repeat_region 3712032..3712318 FT /rpt_family="AluSx" FT repeat_region complement(3712536..3712567) FT /rpt_family="MIR" FT repeat_region 3712665..3712966 FT /rpt_family="AluJo" FT repeat_region 3713319..3713703 FT /rpt_family="L1MC3" FT repeat_region complement(3713711..3714022) FT /rpt_family="AluY" FT repeat_region complement(3714045..3714341) FT /rpt_family="AluSg" FT repeat_region complement(3714342..3714475) FT /rpt_family="AluSg1" FT repeat_region 3714624..3714715 FT /rpt_family="AluSc" FT repeat_region complement(3715092..3715386) FT /rpt_family="AluY" FT repeat_region complement(3715628..3715745) FT /rpt_family="MER20" FT repeat_region complement(3715777..3716075) FT /rpt_family="AluSq" FT repeat_region complement(3716076..3716370) FT /rpt_family="AluSx" FT repeat_region complement(3716385..3716415) FT /rpt_family="MER20" FT repeat_region 3716497..3716528 FT /rpt_family="MIR" FT repeat_region complement(3716622..3716766) FT /rpt_family="AluJb" FT repeat_region complement(3716800..3716963) FT /rpt_family="AluSx" FT repeat_region complement(3716965..3717262) FT /rpt_family="AluSp" FT repeat_region complement(3717265..3717397) FT /rpt_family="AluSx" FT repeat_region complement(3717404..3717427) FT /rpt_family="(TA)n" FT repeat_region complement(3717429..3717731) FT /rpt_family="AluSq" FT repeat_region complement(3717770..3717916) FT /rpt_family="FRAM" FT repeat_region 3717932..3718209 FT /rpt_family="AluY" FT repeat_region complement(3718211..3718263) FT /rpt_family="(CA)n" FT repeat_region complement(3718264..3718380) FT /rpt_family="FLAM_C" FT repeat_region complement(3718487..3718714) FT /rpt_family="AluSx" FT repeat_region 3718900..3719179 FT /rpt_family="AluSx" FT repeat_region 3719452..3719750 FT /rpt_family="AluSx" FT repeat_region complement(3719904..3720042) FT /rpt_family="AluJo" FT repeat_region complement(3720050..3720189) FT /rpt_family="MIR" FT repeat_region complement(3720822..3720896) FT /rpt_family="(GGAA)n" FT repeat_region complement(3720900..3721197) FT /rpt_family="AluSg" FT misc_feature complement(3721515..3721631) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 58.000" FT repeat_region 3721547..3721579 FT /rpt_family="GC_rich" FT repeat_region 3721712..3721770 FT /rpt_family="(GGA)n" FT repeat_region complement(3722018..3722071) FT /rpt_family="MIR" FT repeat_region 3722175..3722266 FT /rpt_family="MIR" FT repeat_region complement(3722552..3722592) FT /rpt_family="GC_rich" FT repeat_region complement(3722852..3722907) FT /rpt_family="GC_rich" FT repeat_region 3723508..3723807 FT /rpt_family="AluSx" FT repeat_region 3723808..3723840 FT /rpt_family="AT_rich" FT repeat_region complement(3723873..3724007) FT /rpt_family="LINE2" FT repeat_region complement(3724196..3724490) FT /rpt_family="AluY" FT repeat_region complement(3724545..3724836) FT /rpt_family="AluJo" FT repeat_region 3724977..3725272 FT /rpt_family="AluJo" FT repeat_region 3725273..3725296 FT /rpt_family="(CCAA)n" FT repeat_region 3725340..3725472 FT /rpt_family="MIR" FT repeat_region 3725485..3725709 FT /rpt_family="AluSq" FT repeat_region complement(3725834..3725916) FT /rpt_family="MIR" FT repeat_region 3726315..3726579 FT /rpt_family="AluSq" FT repeat_region 3726611..3726813 FT /rpt_family="AluJo" FT repeat_region 3726814..3727091 FT /rpt_family="AluJb" FT repeat_region 3727106..3727199 FT /rpt_family="MIR" FT repeat_region 3727200..3727500 FT /rpt_family="AluSq" FT repeat_region complement(3727555..3727662) FT /rpt_family="LINE2" FT repeat_region 3727664..3727955 FT /rpt_family="AluSx" FT repeat_region 3727956..3728257 FT /rpt_family="AluSx" FT misc_feature 3728374..3728478 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 89.000" FT misc_feature 3728602..3728711 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 87.000" FT repeat_region 3728769..3729063 FT /rpt_family="AluSx" FT repeat_region 3729370..3729435 FT /rpt_family="(GAAA)n" FT repeat_region 3729497..3729796 FT /rpt_family="AluSx" FT repeat_region complement(3729807..3729885) FT /rpt_family="MIR" FT misc_feature 3730026..3730128 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature 3730353..3730779 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 78.000" FT repeat_region 3730528..3730565 FT /rpt_family="GC_rich" FT repeat_region complement(3730771..3730982) FT /rpt_family="AluSq" FT repeat_region 3731188..3731346 FT /rpt_family="MLT1D" FT repeat_region 3731349..3731653 FT /rpt_family="AluSx" FT CDS join(3728374..3728478,3728602..3728711,3730026..3730128, FT 3730353..3730704,3731933..3732036,3733751..3733910, FT 3734283..3734433,3735564..3735637,3735867..3735933, FT 3736163..3736319,3738553..3738661,3738895..3739132, FT 3740550..3740761,3743937..3744032,3746009..3746079, FT 3746483..3746693,3746774..3746874,3747792..3748079, FT 3750136..3750182,3750580..3750682) FT /codon_start=1 FT /product="ZO-3 [Homo sapiens]" FT /note="Human homolog of (AF023617) ZO-3 [Canis familiaris]; FT MAGUK protein family member; canine ZO-3 found at the tight FT junction, interacts with ZO-1 and occludin; Human ortholog FT 84% identical to (AF023617) ZO-3 [Canis familiaris]" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC72274.1" FT /translation="MNLCGLMPIFPAPLDQVADMEELTIWEQHTATLSKDPRRGFGIAI FT SGGRDRPGGSMVVSDVVPGGPAEGRLQTGDHIVMVNGVSMENATSAFAIQILKTCTKMA FT NITVKRPRRIHLPATKASPSSPGRQDSDEDDGPQRVEEVDQGRGYDGDSSSGSGRSWDE FT RSRRPRPGRRGRAGSHGRRSPGGGSEANGLALVSGFKRLPRQDVQMKPVKSVLVKRRDS FT EEFGVKLGSQIFIKHITDSGLAARHRGLQEGDLILQINGVSSQNLSLNDTRRLIEKSEG FT KLSLLVLRDRGQFLVNIPPAVSDSDSSPLEEGVTMADEMSSPPADISDLASELSQAPPS FT HIPPPPRHAQRSPEASQTDSPVESPRLRRESSVDSRTISEPDEQRSELPRESSYDIYRV FT PSSQSMEDRGYSPDTRVVRFLKGKSIGLRLAGGNDVGIFVSGVQAGSPADGQGIQEGDQ FT ILQVNDVPFQNLTREEAVQFLLGLPPGEEMELVTQRKQDIFWKMVQSRVGDSFYIRTHF FT ELEPSPPSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQS FT RAEQLASLEAAQRAVGVGPGSSAGSNARAEFWRLRGLRRGAKKTTQRSREDLSALTRQG FT RYPPYERVVLREASFKRPVVILGPVADIAMQKLTAEMPDQFEIAETVSRTDSPSKIIKL FT DTVRVIAEKDKHALLDVTPSAIERLNYVQYYPIVVFFIPESRPALKALRQWLAPASRRS FT TRRLYAQAQKLRKHSSHLFTATIPLNGTSDTWYQELKAIIREQQTRPIWTAEDQLDGSL FT EDNLDLPHHGLADSSADLSCDSRVNSDYETDGEGGAYTDGEGYTDGEGGPYTDVDDEPP FT APALARSSEPVQADESQSPRDRGRISAHQGAQVDSRHPQGQWRQDSMRTYEREALKKKF FT MRVHDAESSDEDGYDWGPATDL" FT repeat_region complement(3732509..3732801) FT /rpt_family="AluSx" FT repeat_region complement(3732804..3732942) FT /rpt_family="AluSp" FT repeat_region complement(3732997..3733031) FT /rpt_family="(GAAAA)n" FT repeat_region complement(3733033..3733329) FT /rpt_family="AluSx" FT repeat_region complement(3734060..3734184) FT /rpt_family="AluSg/x" FT repeat_region complement(3734549..3734663) FT /rpt_family="MLT1D-internal" FT repeat_region 3734671..3734963 FT /rpt_family="AluSq" FT repeat_region complement(3735014..3735163) FT /rpt_family="AluJo" FT repeat_region complement(3735167..3735190) FT /rpt_family="AT_rich" FT repeat_region complement(3735196..3735496) FT /rpt_family="AluSx" FT repeat_region complement(3736571..3736872) FT /rpt_family="AluSq" FT repeat_region complement(3736877..3737173) FT /rpt_family="AluSx" FT repeat_region 3739208..3739501 FT /rpt_family="AluSc" FT repeat_region complement(3739588..3739949) FT /rpt_family="MLT1D" FT repeat_region 3739950..3740247 FT /rpt_family="AluSc" FT repeat_region 3740250..3740404 FT /rpt_family="AluSg/x" FT repeat_region complement(3740417..3740519) FT /rpt_family="MLT1D" FT repeat_region 3740857..3740974 FT /rpt_family="FLAM_C" FT repeat_region complement(3740999..3741298) FT /rpt_family="AluSg" FT repeat_region 3741322..3741642 FT /rpt_family="AluSq" FT repeat_region 3741684..3741988 FT /rpt_family="AluSq" FT repeat_region complement(3742118..3742142) FT /rpt_family="AT_rich" FT repeat_region 3742150..3742426 FT /rpt_family="AluJo" FT repeat_region 3742659..3742979 FT /rpt_family="AluSx" FT repeat_region 3742982..3743281 FT /rpt_family="AluSg" FT repeat_region 3743403..3743609 FT /rpt_family="MER58A" FT repeat_region complement(3744313..3744345) FT /rpt_family="LINE2" FT repeat_region 3744382..3744678 FT /rpt_family="AluSc" FT repeat_region 3744711..3744943 FT /rpt_family="AluSg/x" FT repeat_region 3744964..3745096 FT /rpt_family="FLAM_C" FT repeat_region complement(3745142..3745441) FT /rpt_family="AluSx" FT repeat_region 3745718..3745778 FT /rpt_family="MIR" FT repeat_region complement(3747062..3747358) FT /rpt_family="AluSx" FT repeat_region 3747382..3747546 FT /rpt_family="AluSc" FT misc_feature complement(3747988..3748082) FT /note="BLASTN similarity to AI218504 (276..370); match: 1, FT score: 4.5e-30; database searched: month.na; qh16g02.x1 FT Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1844882 FT 3' similar to contains MER22.t2 MER22 repetitive" FT repeat_region complement(3748268..3748563) FT /rpt_family="AluSg" FT repeat_region complement(3748566..3748846) FT /rpt_family="AluSp" FT repeat_region complement(3748855..3749165) FT /rpt_family="AluSx" FT repeat_region 3749179..3749272 FT /rpt_family="MIR" FT repeat_region complement(3749337..3749642) FT /rpt_family="AluJo" FT misc_feature complement(3750131..3750182) FT /note="BLASTN similarity to AI218504 (232..283); match: FT 0.98, score: 8.3e-102; database searched: month.na; FT qh16g02.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone FT IMAGE:1844882 3' similar to contains MER22.t2 MER22 FT repetitive" FT misc_feature complement(3750579..3750808) FT /note="BLASTN similarity to AI218504 (3..232); match: 0.98, FT score: 8.3e-102; database searched: month.na; qh16g02.x1 FT Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1844882 FT 3' similar to contains MER22.t2 MER22 repetitive" FT misc_feature 3750888..3751122 FT /note="BLASTN similarity to AI222683 (1..235); match: 0.94, FT score: 1.9e-105; database searched: month.na; qg25d07.x1 FT NCI_CGAP_Kid3 Homo sapiens cDNA clone IMAGE:1762093 3' FT similar to TR:O35430 O35430 NEURONAL MUNC18-1" FT mRNA complement(join(<3751024..3751095,3751187..3751327, FT 3751432..3751551,3752506..3752718,3752818..3752988, FT 3753763..3753924,3754017..3754103,3754193..3754338, FT 3759559..3759598,3759687..>3760262)) FT /product="mint 3 [Homo sapiens]" FT CDS complement(join(3751024..3751095,3751187..3751327, FT 3751432..3751551,3752506..3752718,3752818..3752988, FT 3753763..3753924,3754017..3754103,3754193..3754338, FT 3759559..3759598,3759687..3760262)) FT /codon_start=1 FT /product="mint 3 [Homo sapiens]" FT /note="Human homolog of mint 3 [Rattus norvegicus]; MAGUK FT protein family member; canine ZO-3 protein found at the FT tight junction and interacts with ZO-1 and occludin.~Human FT ortholog 74% identical to rat homolog (AF029109), and 76% FT identical to X11gamma in Mus musculus (AF070975); X11gamma FT [Homo sapiens]" FT /protein_id="AAC72275.1" FT /translation="MDFPTISRSPSGPPAMDLEGPRDILVPSEDLTPDSQWDPMPGGPG FT SLSRMELDESSLQELVQQFEALPGDLVGPSPGGAPCPLHIATGHGLASQEIADAHGLLS FT AEAGRDDLLGLLHCEECPPSQTGPEEPLEPAPRLLQPPEDPDEDSDSPEWVEGASAEQE FT GSRSSSSSPEPWLETVPLVTPEEPPAGAQSPETLASYPAPQEVPGPCDHEDLLDGVIFG FT ARYLGSTQLVSERNPPTSTRMAQAREAMDRVKAPDGETQPMTEVDLFVSTKRIKVLTAD FT SQEAMMDHALHTISYTADIGCVLVLMARRRLARRPAPQDHGRRLYKMLCHVFYAEDAQL FT IAQAIGQAFAAAYSQFLRESGIDPSQVGVHPSPGACHLHNGDLDHFSNSDNCREVHLEK FT RRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLA FT ACQAAVRETKSQTSVTLSIVHCPPVTTAIIHRPHAREQLGFCVEDGIICSLLRGGIAER FT GGIRVGHRIIEINGQSVVATPHARIIELLTEAYGEVHIKTMPAATYRLLTGQEQPVYL" FT misc_feature 3751184..3751327 FT /note="BLASTN similarity to AI222683 (206..349); match: FT 0.72, score: 1.9e-105; database searched: month.na; FT qg25d07.x1 NCI_CGAP_Kid3 Homo sapiens cDNA clone FT IMAGE:1762093 3' similar to TR:O35430 O35430 NEURONAL FT MUNC18-1" FT repeat_region complement(3751386..3751427) FT /rpt_family="GC_rich" FT repeat_region 3751855..3751897 FT /rpt_family="MIR" FT repeat_region 3751926..3752218 FT /rpt_family="AluJb" FT repeat_region 3752266..3752362 FT /rpt_family="MIR" FT repeat_region 3753359..3753661 FT /rpt_family="AluJo" FT repeat_region complement(3754143..3754193) FT /rpt_family="(CGGG)n" FT repeat_region complement(3754677..3754960) FT /rpt_family="AluSx" FT repeat_region 3755510..3755817 FT /rpt_family="AluSx" FT repeat_region 3756062..3756194 FT /rpt_family="MER33" FT repeat_region 3756195..3756495 FT /rpt_family="AluSq" FT repeat_region 3756502..3756571 FT /rpt_family="MER33" FT repeat_region 3756572..3756738 FT /rpt_family="AluSg/x" FT repeat_region 3756742..3756820 FT /rpt_family="MER33" FT repeat_region complement(3757111..3757404) FT /rpt_family="AluJo" FT repeat_region 3757450..3757693 FT /rpt_family="AluSg" FT repeat_region 3757753..3757932 FT /rpt_family="MER58B" FT repeat_region complement(3757933..3758230) FT /rpt_family="AluSg" FT repeat_region complement(3758257..3758556) FT /rpt_family="AluJo" FT repeat_region 3758596..3758887 FT /rpt_family="AluSg" FT repeat_region 3758940..3759233 FT /rpt_family="AluJb" FT repeat_region 3759239..3759323 FT /rpt_family="MER58B" FT repeat_region 3760333..3760459 FT /rpt_family="AluJ" FT repeat_region 3760465..3760761 FT /rpt_family="AluSg" FT repeat_region 3760763..3760926 FT /rpt_family="AluJ" FT repeat_region complement(3761010..3761080) FT /rpt_family="MIR" FT repeat_region 3762087..3762193 FT /rpt_family="MIR" FT repeat_region 3762215..3762322 FT /rpt_family="(TA)n" FT misc_feature 3762665..3762816 FT /note="DDS similarity to AA340000 EST45141 Fetal skin Homo FT sapiens cDNA 5' end; (1..152); 99% identity.~Additional EST FT matches: R37899, N28483, AA523847, C17304, N59853" FT repeat_region complement(3762913..3762977) FT /rpt_family="SUBTEL_sat" FT repeat_region 3763491..3763627 FT /rpt_family="AluJo" FT repeat_region 3763631..3763929 FT /rpt_family="AluSg" FT repeat_region 3763931..3764069 FT /rpt_family="AluJo" FT repeat_region complement(3764077..3764380) FT /rpt_family="AluY" FT repeat_region complement(3764401..3764712) FT /rpt_family="AluSx" FT repeat_region 3764745..3765043 FT /rpt_family="AluY" FT misc_feature 3765164..3765238 FT /note="DDS similarity to AA340000 EST45141 Fetal skin Homo FT sapiens cDNA 5' end; (153..227); 99% identity.~Additional FT EST matches: R37899,N28483,AA523847, C17304, FT N59853~predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 74.000" FT misc_feature 3765164..3765329 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~DDS similarity FT to AA482135 aa53a06.r1 NCI_CGAP_GCB1 Homo sapiens cDNA FT clone IMAGE:824626 5'; (72..237); 100% identity.~Additional FT EST matches: W04390, AA523847, AA813555" FT misc_feature complement(3765235..3765330) FT /note="BLASTN similarity to AI148650 (312..407); match: 1, FT score: 1.7e-30; database searched: month.na; qc69a11.x1 FT Soares_placenta_8to9weeks_2NbHP8to9W Homo sapiens cDNA FT clone IMAGE:1714844 3' similar to WP:F25H5.6 CE15902" FT repeat_region 3765468..3765578 FT /rpt_family="MIR" FT repeat_region 3765615..3765912 FT /rpt_family="AluSx" FT repeat_region complement(3765913..3766076) FT /rpt_family="AluSx" FT repeat_region complement(3766077..3766376) FT /rpt_family="AluSq" FT repeat_region complement(3766380..3766511) FT /rpt_family="AluSx" FT repeat_region complement(3766514..3766904) FT /rpt_family="LINE2" FT misc_feature complement(3767250..3767287) FT /note="BLASTN similarity to AI142668 (278..315); match: FT 0.81, score: 9.1e-112; database searched: month.na; FT ok33g03.s1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA FT clone IMAGE:1509652 3', mRNA sequence [Homo sapiens]" FT misc_feature complement(3767250..3767558) FT /note="BLASTN similarity to AI148650 (13..321); match: FT 0.98, score: 1.0e-116; database searched: month.na; FT qc69a11.x1 Soares_placenta_8to9weeks_2NbHP8to9W Homo FT sapiens cDNA clone IMAGE:1714844 3' similar to WP:F25H5.6 FT CE15902" FT misc_feature 3767259..3767384 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 88.000~DDS similarity FT to overlapping ESTs: (3950..4086) AA482135 aa53a06.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:824626 5'; FT (238..374); 100% identity.~(3950..4258) AA813555 ai66h09.s1 FT Soares testis NHT Homo sapiens cDNA clone 1375841 3'; FT (306.. 5); 98% identity." FT misc_feature complement(3767276..3767558) FT /note="BLASTN similarity to AI142668 (8..290); match: 0.98, FT score: 9.1e-112; database searched: month.na; ok33g03.s1 FT Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone FT IMAGE:1509652 3', mRNA sequence [Homo sapiens]" FT misc_feature complement(3767357..3767710) FT /note="BLASTN similarity to AQ198773 (1..354); match: 0.99, FT score: 2.1e-138; database searched: month.na; FT RPCI11-60H2.TJ RPCI11 Homo sapiens genomic clone R-60H2, FT genomic survey sequence [Homo sapiens]" FT repeat_region 3768784..3769082 FT /rpt_family="LINE2" FT repeat_region complement(3769099..3769385) FT /rpt_family="AluJo" FT repeat_region complement(3770750..3770808) FT /rpt_family="GC_rich" FT misc_feature complement(3770812..3770957) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 69.000" FT misc_feature complement(3770898..3770978) FT /note="BLASTX similarity to 2240028 (174..200); match: FT 0.66, score: 2.9e-57; database searched: nr; (AF001908) FT retinal homeobox protein [Danio rerio]" FT /note="BLASTX similarity to 1932775 (175..201); match: FT 0.74, score: 3.5e-54; database searched: nr; (U73177) FT paired-type homeobox gene [Mus musculus]" FT /note="BLASTX similarity to 2240024 (175..201); match: FT 0.74, score: 3.5e-54; database searched: nr; (AF001906) FT retinal homeobox protein [Mus musculus]" FT misc_feature complement(3771078..3771128) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 55.000" FT misc_feature complement(3771522..3771683) FT /note="BLASTX similarity to 2240024 (129..182); match: 0.9, FT score: 3.5e-54; database searched: nr; (AF001906) retinal FT homeobox protein [Mus musculus]" FT /note="BLASTX similarity to 1932775 (129..182); match: 0.9, FT score: 3.5e-54; database searched: nr; (U73177) paired-type FT homeobox gene [Mus musculus]" FT misc_feature complement(3771522..3771689) FT /note="BLASTX similarity to 2240028 (126..181); match: FT 0.87, score: 2.9e-57; database searched: nr; (AF001908) FT retinal homeobox protein [Danio rerio]" FT misc_feature complement(3771525..3771749) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(3771928..3772025) FT /rpt_family="(CAGA)n" FT misc_feature complement(3772161..3772240) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 94.000" FT repeat_region 3772433..3772499 FT /rpt_family="MIR" FT repeat_region 3772749..3773049 FT /rpt_family="AluSq" FT repeat_region complement(3773087..3773100) FT /rpt_family="LINE2" FT repeat_region complement(3773101..3773144) FT /rpt_family="MIR" FT repeat_region complement(3773145..3773261) FT /rpt_family="LINE2" FT repeat_region complement(3773311..3773608) FT /rpt_family="AluSg" FT repeat_region complement(3773611..3773903) FT /rpt_family="AluSx" FT repeat_region 3774550..3774598 FT /rpt_family="(GAAA)n" FT repeat_region complement(3775624..3775740) FT /rpt_family="MER81" FT repeat_region 3776206..3776335 FT /rpt_family="(TGAA)n" FT repeat_region 3776397..3776518 FT /rpt_family="(TGGA)n" FT repeat_region 3776565..3776741 FT /rpt_family="(TGGA)n" FT repeat_region 3776761..3776888 FT /rpt_family="(TGGA)n" FT repeat_region 3776893..3776993 FT /rpt_family="(TGGA)n" FT repeat_region 3777088..3777231 FT /rpt_family="MIR" FT mRNA complement(join(3777973..3778420,3778507..3778593, FT 3778990..3779185,3779376..3779449,3779531..3779615, FT 3779696..3779795,3781605..3781670,3783124..3783217, FT 3783812..3784031,3784122..3784237,3784336..3784449, FT 3784823..3784882,3785062..3785284,3786167..3786280)) FT /gene="MATK" FT /product="tyrosine kinase MATK" FT CDS complement(join(3778181..3778420,3778507..3778593, FT 3778990..3779185,3779376..3779449,3779531..3779615, FT 3779696..3779795,3781605..3781670,3783124..3783217, FT 3783812..3784031,3784122..3784237,3784336..3784449, FT 3784823..3784882,3785062..3785133)) FT /codon_start=1 FT /gene="MATK" FT /product="MATK_HUMAN" FT /EC_number="2.7.1.112" FT /note="MEGAKARYOCYTE-ASSOCIATED TYROSINE-PROTEIN KINASE; FT TYROSINE-PROTEIN KINASE CTK; PROTEIN KINASE HYL; FT HEMATOPOIETIC CONSENSUS TYROSINE-LACKING KINASE" FT /protein_id="AAC62843.1" FT /translation="MAGRGSLVSWRAFHGCDSAEELPRVSPRFLRAWHPPPVSARMPTR FT RWAPGTQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGA FT LREREALSADPKLSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFG FT RDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAICTKLVRPKRKHGTKSAEEE FT LARAGWLLNLQHLTLGAQIGEGEFGAVLQGEYLGQKVAVKNIKCDVTAQAFLDETAVMT FT KMQHENLVRLLGVILHQGLYIVMEHVSKGNLVNFLRTRGRALVNTAQLLQFSLHVAEGM FT EYLESKKLVHRDLAARNILVSEDLVAKVSDFGLAKAERKGLDSSRLPVKWTAPEALKHG FT KFTSKSDVWSFGVLLWEVFSYGRAPYPKMSLKEVSEAVEKGYRMEPPEGCPGPVHVLMS FT SCWEAEPARRPPFRKLAEKLARELRSAGAPASVSGQDADGSTSPRSQEP" FT repeat_region 3780002..3780303 FT /rpt_family="AluSx" FT repeat_region complement(3780325..3780418) FT /rpt_family="MER58B" FT repeat_region complement(3780434..3780729) FT /rpt_family="AluY" FT repeat_region complement(3780734..3781025) FT /rpt_family="AluJo" FT repeat_region complement(3781026..3781276) FT /rpt_family="MER58B" FT repeat_region complement(3781431..3781550) FT /rpt_family="MIR" FT repeat_region complement(3782484..3782537) FT /rpt_family="LINE2" FT repeat_region complement(3786174..3786231) FT /rpt_family="GC_rich" FT misc_feature complement(3786290..3786754) FT /note="BLASTN similarity to S75144 (1..466); match: 0.99, FT score: 6.8e-163; database searched: nt; FT Matk=megakaryocyte-associated tyrosine kinase [human, FT Genomic, 596 nt, segment 1 of 13]" FT repeat_region complement(3786334..3786450) FT /rpt_family="(CGG)n" FT repeat_region complement(3787129..3787274) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(3787373..3787678) FT /rpt_family="AluSx" FT repeat_region complement(3787929..3788058) FT /rpt_family="FLAM_A" FT repeat_region complement(3788067..3788144) FT /rpt_family="(TAA)n" FT repeat_region complement(3788147..3788204) FT /rpt_family="MLT1D" FT repeat_region 3788205..3788340 FT /rpt_family="AluSq/x" FT repeat_region 3788341..3788636 FT /rpt_family="AluSg1" FT repeat_region complement(3788641..3788747) FT /rpt_family="FLAM_C" FT repeat_region complement(3788749..3788982) FT /rpt_family="AluSx" FT misc_feature complement(3789271..3789339) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(3789721..3789897) FT /rpt_family="AluSg/x" FT repeat_region complement(3789898..3790139) FT /rpt_family="AluSg" FT repeat_region 3790477..3790783 FT /rpt_family="LINE2" FT repeat_region complement(3791350..3791640) FT /rpt_family="AluSq" FT repeat_region 3791824..3792120 FT /rpt_family="AluSx" FT repeat_region complement(3792510..3792815) FT /rpt_family="AluSx" FT repeat_region 3793282..3793419 FT /rpt_family="AluSx" FT repeat_region 3793420..3793717 FT /rpt_family="AluY" FT repeat_region 3793718..3793881 FT /rpt_family="AluSx" FT repeat_region 3794007..3794143 FT /rpt_family="LINE2" FT repeat_region 3794370..3794671 FT /rpt_family="AluJo" FT repeat_region 3794823..3794960 FT /rpt_family="MER58B" FT repeat_region complement(3794974..3795274) FT /rpt_family="AluY" FT repeat_region complement(3795275..3795565) FT /rpt_family="AluSx" FT repeat_region 3795566..3795713 FT /rpt_family="MER58B" FT repeat_region complement(3795758..3796049) FT /rpt_family="AluSx" FT repeat_region complement(3796120..3796153) FT /rpt_family="AT_rich" FT repeat_region complement(3796475..3796499) FT /rpt_family="AT_rich" FT repeat_region complement(3797298..3797581) FT /rpt_family="AluJo" FT repeat_region 3797653..3797739 FT /rpt_family="SVA" FT repeat_region 3797674..3797740 FT /rpt_family="AluJo" FT repeat_region 3797758..3798058 FT /rpt_family="AluSx" FT repeat_region 3798059..3798089 FT /rpt_family="(TAAA)n" FT repeat_region complement(3798216..3798284) FT /rpt_family="(GAAAA)n" FT repeat_region complement(3798508..3798809) FT /rpt_family="AluSq" FT repeat_region complement(3798812..3799102) FT /rpt_family="AluJo" FT repeat_region 3799556..3799852 FT /rpt_family="AluSx" FT repeat_region 3799860..3800159 FT /rpt_family="AluY" FT repeat_region 3800345..3800665 FT /rpt_family="AluSq" FT repeat_region complement(3800857..3801134) FT /rpt_family="AluSx" FT misc_feature 3801400..3801649 FT /note="BLASTN similarity to M78237 (1..250); match: 0.98, FT score: 3.3e-94; database searched: est; EST00385 Homo FT sapiens cDNA clone HEFBA10." FT repeat_region complement(3802170..3802467) FT /rpt_family="AluSq" FT repeat_region 3802705..3803002 FT /rpt_family="AluSx" FT repeat_region complement(3803393..3803492) FT /rpt_family="(GGA)n" FT misc_feature complement(3804023..3804280) FT /note="BLASTN similarity to Z39431 (1..258); match: 0.99, FT score: 2.7e-99; database searched: est; H. sapiens partial FT cDNA sequence" FT repeat_region complement(3804877..3805169) FT /rpt_family="AluJb" FT repeat_region complement(3805368..3805648) FT /rpt_family="AluSx" FT repeat_region complement(3805653..3805794) FT /rpt_family="AluJo" FT misc_feature complement(3805947..3806123) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 70.000" FT repeat_region complement(3806269..3806499) FT /rpt_family="AluSg" FT repeat_region complement(3806269..3806557) FT /rpt_family="AluSg" FT misc_feature complement(3807170..3807267) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 69.000" FT repeat_region complement(3807555..3807679) FT /rpt_family="(CA)n" FT repeat_region 3807684..3807806 FT /rpt_family="(CATG)n" FT repeat_region complement(3807856..3807984) FT /rpt_family="(CATG)n" FT repeat_region complement(3808153..3808271) FT /rpt_family="(CA)n" FT misc_feature complement(3808870..3808981) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 74.000" FT repeat_region complement(3809174..3809306) FT /rpt_family="AluSg/x" FT repeat_region 3809660..3809964 FT /rpt_family="AluSq" FT misc_feature complement(3810724..3810846) FT /note="BLASTX similarity to PID (217..257); match: 0.63, FT score: 2.9e-17; database searched: nr; (X98265) M-phase FT phosphoprotein 4 [Homo sapiens]" FT /note="BLASTX similarity to (218..258); match: 0.63, FT score: 6.2e-18; database searched: nr; transcription factor FT NF-AT 90K chain - human gi|532315 (U10324) NF90 protein FT [Homo sapiens]" FT misc_feature complement(3811249..3811344) FT /note="BLASTX similarity to PID (193..224); match: 0.56, FT score: 2.9e-17; database searched: nr; (X98265) M-phase FT phosphoprotein 4 [Homo sapiens]" FT /note="BLASTX similarity to (194..225); match: 0.53, FT score: 6.2e-18; database searched: nr; transcription factor FT NF-AT 90K chain - human gi|532315 (U10324) NF90 protein FT [Homo sapiens]" FT misc_feature complement(3811349..3811408) FT /note="BLASTX similarity to (82..101); match: 0.45, score: FT 6.2e-18; database searched: nr; transcription factor NF-AT FT 90K chain - human gi|532315 (U10324) NF90 protein [Homo FT sapiens]" FT repeat_region complement(3811459..3811750) FT /rpt_family="AluSx" FT repeat_region complement(3811757..3811938) FT /rpt_family="AluJo" FT repeat_region complement(3811940..3812241) FT /rpt_family="AluSx" FT repeat_region complement(3812245..3812377) FT /rpt_family="AluJo" FT repeat_region 3812795..3813097 FT /rpt_family="AluSx" FT misc_feature complement(3813818..3813956) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 3814160..3814378 FT /rpt_family="L1MB3" FT repeat_region 3814750..3814862 FT /rpt_family="LINE2" FT repeat_region complement(3815086..3815387) FT /rpt_family="AluSx" FT repeat_region complement(3815578..3815748) FT /rpt_family="AluJ" FT repeat_region complement(3815749..3816052) FT /rpt_family="AluY" FT repeat_region complement(3816053..3816197) FT /rpt_family="AluJ" FT repeat_region complement(3816242..3816542) FT /rpt_family="AluSx" FT misc_feature complement(3816672..3816824) FT /note="BLASTX similarity to 1620755 (499..549); match: FT 0.64, score: 1.6e-13; database searched: nr; (U73125) FT zinc-finger protein Zn72D [Drosophila melanogaster]" FT misc_feature complement(3816672..3816843) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 92.000" FT repeat_region 3816924..3816979 FT /rpt_family="MIR" FT repeat_region 3817275..3817575 FT /rpt_family="AluSx" FT repeat_region 3817588..3817773 FT /rpt_family="AluSg/x" FT repeat_region 3817900..3818181 FT /rpt_family="L1MB4" FT repeat_region 3818203..3818484 FT /rpt_family="AluJo" FT misc_feature complement(3819056..3819233) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 95.000" FT misc_feature complement(3819081..3819227) FT /note="BLASTX similarity to 1620755 (410..458); match: FT 0.67, score: 1.3e-14; database searched: nr; (U73125) FT zinc-finger protein Zn72D [Drosophila melanogaster]" FT repeat_region 3819570..3819859 FT /rpt_family="AluSx" FT misc_feature complement(3820180..3820288) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 95.000" FT misc_feature complement(3821305..3821477) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(3821609..3821906) FT /rpt_family="AluSx" FT misc_feature complement(3822079..3822207) FT /note="BLASTX similarity to 1620755 (276..318); match: FT 0.58, score: 2.2e-15; database searched: nr; (U73125) FT zinc-finger protein Zn72D [Drosophila melanogaster]" FT misc_feature complement(3822112..3822198) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 93.000" FT misc_feature 3822131..3822283 FT /note="BLASTN similarity (1..153); match: 1, score: FT 2.7e-60; database searched: CpG; bases 73 to 400 (SL to FT QR)" FT repeat_region complement(3822306..3822468) FT /rpt_family="AluJo/FRAM" FT repeat_region 3822470..3822722 FT /rpt_family="AluJo" FT repeat_region 3824013..3824316 FT /rpt_family="AluJo" FT repeat_region 3824653..3824956 FT /rpt_family="AluSx" FT misc_feature complement(3825228..3825405) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 71.000" FT repeat_region complement(3826434..3826735) FT /rpt_family="AluSx" FT repeat_region 3826964..3827259 FT /rpt_family="AluSq" FT misc_feature complement(3827466..3827657) FT /note="BLASTX similarity to 1620755 (140..203); match: FT 0.59, score: 9.9e-22; database searched: nr; (U73125) FT zinc-finger protein Zn72D [Drosophila melanogaster]" FT misc_feature complement(3827469..3827651) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 96.000" FT repeat_region complement(3827817..3828117) FT /rpt_family="AluSx" FT repeat_region complement(3828144..3828311) FT /rpt_family="AluSg/x" FT repeat_region complement(3828959..3829259) FT /rpt_family="AluSx" FT repeat_region complement(3829450..3829479) FT /rpt_family="(CA)n" FT repeat_region complement(3829477..3829508) FT /rpt_family="(CAA)n" FT repeat_region complement(3829514..3829811) FT /rpt_family="AluJo" FT repeat_region 3830156..3830442 FT /rpt_family="AluJo" FT repeat_region 3830894..3831032 FT /rpt_family="(CA)n" FT repeat_region 3831036..3831155 FT /rpt_family="(CA)n" FT misc_feature complement(3831301..3831431) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 61.000" FT repeat_region 3831437..3831498 FT /rpt_family="(CGG)n" FT misc_feature complement(3831658..3831876) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 81.000" FT repeat_region complement(3832320..3832617) FT /rpt_family="AluSc" FT repeat_region complement(3832634..3832937) FT /rpt_family="AluJo" FT repeat_region 3832967..3833266 FT /rpt_family="AluSx" FT repeat_region 3833293..3833590 FT /rpt_family="AluY" FT misc_feature complement(3833662..3833776) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 85.000" FT misc_feature complement(3834715..3834868) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(3835112..3835248) FT /rpt_family="MIR" FT repeat_region complement(3835329..3835630) FT /rpt_family="AluY" FT repeat_region 3835661..3835970 FT /rpt_family="AluJo" FT repeat_region 3835976..3836309 FT /rpt_family="MER2" FT repeat_region complement(3836332..3836533) FT /rpt_family="AluJb" FT repeat_region complement(3837139..3837242) FT /rpt_family="AluSg/x" FT misc_feature 3837748..3837873 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 64.000" FT repeat_region 3838547..3838617 FT /rpt_family="LINE2" FT repeat_region 3839250..3839556 FT /rpt_family="AluSx" FT repeat_region complement(3839849..3839950) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(3840238..3840534) FT /rpt_family="AluSx" FT repeat_region complement(3840538..3840817) FT /rpt_family="AluJo" FT repeat_region 3840820..3840931 FT /rpt_family="MER3" FT repeat_region 3841404..3841620 FT /rpt_family="AluJo" FT repeat_region 3841660..3841799 FT /rpt_family="FRAM" FT repeat_region complement(3841801..3841951) FT /rpt_family="AluSg/x" FT repeat_region complement(3842009..3842311) FT /rpt_family="AluJo" FT repeat_region complement(3842491..3842614) FT /rpt_family="L1MB8" FT repeat_region complement(3842619..3842922) FT /rpt_family="AluSq" FT repeat_region 3842967..3843186 FT /rpt_family="L1MB3" FT repeat_region 3843187..3843475 FT /rpt_family="AluSx" FT repeat_region 3843477..3843539 FT /rpt_family="L1MB3" FT repeat_region 3843549..3843852 FT /rpt_family="AluY" FT repeat_region 3843853..3844231 FT /rpt_family="L1MB3" FT repeat_region complement(3844366..3844666) FT /rpt_family="AluSx" FT repeat_region complement(3844973..3845266) FT /rpt_family="MLT1B" FT repeat_region 3845338..3845468 FT /rpt_family="FLAM_C" FT repeat_region 3845525..3845810 FT /rpt_family="AluJb" FT repeat_region complement(3845829..3845925) FT /rpt_family="MLT1B" FT repeat_region complement(3845974..3846216) FT /rpt_family="AluSx" FT CDS complement(join(4174406..4174450,4174645..4174947, FT 4175029..4175152,4175681..4175809,4175843..4175938, FT 4177080..4177139,4179105..4179287,4180779..4180906, FT 4182471..4182536)) FT /codon_start=1 FT /product="R33423_1" FT /note="Hypothetical human SIR2-like protein; Replaces FT protein encoded by R33590_2 (gi|3548790). Hypothetical FT protein displays similarity (24%) to the yeast FT transciptional silencer SIR2 (encoded by P06700) and FT putative SIR2- related proteins in multiple species" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD15478.1" FT /translation="MSVNYAAGLSPYADKGKCGLPEIFDPPEELERKVWELARLVWQSS FT SVVFHTGAGISTASGIPDFRGPHGVWTMEERGLAPKFDTTFESARPTQTHMALVQLERV FT GLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATG FT RLCTVAKARGLRACRGGCEAPEDSPQLPHCRGELRDTILDWEDSLPDRDLALADEASRN FT ADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPTKHDRHADLRIHGYVDEVMTRL FT MKHLGLEIPAWDGPRVLERALPPLPRPPTPKLEPKEESPTRINGSIPAGPKQEPCAQHN FT GSEPASPKRERPTSPAPHRPPKRGPLVRFREEATPQR" FT repeat_region complement(4180382..4180621) FT /rpt_family="AluSg" FT misc_feature complement(4180787..4180906) FT /note="TBLASTX identity to AA839912 vw66a07.r1 Stratagene FT mouse heart (#937316) Mus musculus cDNA clone IMAGE:1259892 FT 5', mRNA sequence [Mus musculus]; (69..187); Score: FT 1.8e-39; 98% identity.~" FT repeat_region 4181038..4181352 FT /rpt_family="LINE2" FT repeat_region 4181392..4181491 FT /rpt_family="LINE2" FT repeat_region 4181502..4181805 FT /rpt_family="AluSx" FT misc_feature complement(4182471..4182536) FT /note="TBLASTX identity to AA839912 vw66a07.r1 Stratagene FT mouse heart (#937316) Mus musculus cDNA clone IMAGE:1259892 FT 5', mRNA sequence [Mus musculus]; (3..65); Score: 1.8e-39; FT 100% identity.~" FT repeat_region complement(4182963..4182992) FT /rpt_family="(CA)n" FT repeat_region complement(4182993..4183276) FT /rpt_family="AluSx" FT CDS join(<4183321..4183442,4199872..4199937,4207498..4207604, FT 4207778..4207965,4208761..4208798,4210262..4210369, FT 4212567..>4212695) FT /codon_start=3 FT /product="R33243_2, partial protein" FT /note="Hypothetical human protein; This record extends the FT hypothetical protein encoded by f20887_1 (gi|3510240) an FT additional 62 residues towards the amino terminus. However, FT the amino terminus of this protein has not been identified FT definitively within this genomic accession, and will likely FT require the isolation of cDNA. Displays weak similarity to FT ankyrin motif-containing proteins" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD15479.1" FT /translation="QVLLKVNGAGGLEDSFKNHVLSTYFVLGTLESKGGTIYALSQDWG FT KSDERLLQAVENNDAPRSGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLA FT CEGASPETVEVLLQGGAQPGITDALGQDAAHYGALAGDKLILHLLQEAAQRPSPPSALT FT EDDSGEASSQDDRDAYEEIVRLRQERGRLLQKIRGLEQHKERRQQERQLSLHCCSQVQE FT LQQLLVERQEEKESLGREVESLQSRLSLLE" FT repeat_region complement(4183363..4183408) FT /rpt_family="LINE2" FT repeat_region 4183630..4183925 FT /rpt_family="AluSp" FT repeat_region complement(4183976..4184080) FT /rpt_family="LINE2" FT repeat_region 4184724..4184872 FT /rpt_family="(TGGA)n" FT repeat_region 4184886..4185069 FT /rpt_family="(TGGA)n" FT repeat_region 4185082..4185200 FT /rpt_family="(TGGA)n" FT repeat_region 4185336..4185430 FT /rpt_family="(TGGA)n" FT repeat_region complement(4186174..4186253) FT /rpt_family="MIR" FT misc_feature 4186387..4186458 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 54.000" FT repeat_region complement(4186830..4187125) FT /rpt_family="LINE2" FT repeat_region 4187128..4187429 FT /rpt_family="AluSx" FT repeat_region complement(4187456..4187512) FT /rpt_family="LINE2" FT repeat_region complement(4188072..4188373) FT /rpt_family="AluSq" FT repeat_region complement(4188379..4188676) FT /rpt_family="AluJo" FT repeat_region complement(4188804..4189106) FT /rpt_family="AluSx" FT repeat_region complement(4189109..4189236) FT /rpt_family="(TAAAA)n" FT repeat_region complement(4189241..4189548) FT /rpt_family="AluSx" FT repeat_region complement(4189554..4189677) FT /rpt_family="FLAM_A" FT repeat_region complement(4189729..4189867) FT /rpt_family="MIR" FT repeat_region complement(4190094..4190150) FT /rpt_family="TIGGER2" FT repeat_region 4190151..4190436 FT /rpt_family="AluY" FT repeat_region 4190440..4190752 FT /rpt_family="AluSx" FT repeat_region 4190753..4190805 FT /rpt_family="MER8" FT repeat_region complement(4191425..4191474) FT /rpt_family="(TAAAA)n" FT repeat_region complement(4191478..4191778) FT /rpt_family="AluSx" FT repeat_region complement(4191781..4192085) FT /rpt_family="AluSx" FT repeat_region complement(4192338..4192365) FT /rpt_family="AT_rich" FT repeat_region complement(4192378..4192507) FT /rpt_family="FLAM_C" FT repeat_region complement(4192509..4192561) FT /rpt_family="MER45" FT repeat_region complement(4192565..4192646) FT /rpt_family="LINE2" FT repeat_region 4192647..4192950 FT /rpt_family="AluJo" FT repeat_region 4193016..4193314 FT /rpt_family="AluSq" FT repeat_region complement(4193341..4193554) FT /rpt_family="LINE2" FT repeat_region 4193556..4193831 FT /rpt_family="AluSx" FT repeat_region 4193832..4193891 FT /rpt_family="(GGAA)n" FT /note="Length of repeat region is uncertain at this time, FT and may be larger." FT repeat_region 4194088..4194157 FT /rpt_family="MER58B" FT repeat_region complement(4194159..4194449) FT /rpt_family="AluSx" FT repeat_region 4194451..4194581 FT /rpt_family="MER58B" FT repeat_region complement(4194582..4194923) FT /rpt_family="LINE2" FT repeat_region complement(4194976..4195036) FT /rpt_family="Alu" FT repeat_region complement(4195070..4195370) FT /rpt_family="AluSx" FT repeat_region 4195613..4195908 FT /rpt_family="AluSg" FT repeat_region 4195993..4196146 FT /rpt_family="MER20" FT repeat_region complement(4196160..4196309) FT /rpt_family="MIR" FT repeat_region complement(4196335..4196372) FT /rpt_family="(CAA)n" FT repeat_region complement(4196373..4196671) FT /rpt_family="AluSx" FT repeat_region 4196729..4196794 FT /rpt_family="LINE2" FT repeat_region complement(4196811..4196857) FT /rpt_family="LINE2" FT repeat_region complement(4197011..4197209) FT /rpt_family="MIR" FT repeat_region 4197258..4197491 FT /rpt_family="(TGAA)n" FT repeat_region 4197494..4197588 FT /rpt_family="(TGAA)n" FT repeat_region 4197595..4197718 FT /rpt_family="(TGAA)n" FT repeat_region 4197699..4197817 FT /rpt_family="(TGAG)n" FT repeat_region 4197863..4198006 FT /rpt_family="(TGAA)n" FT repeat_region 4198291..4198372 FT /rpt_family="(CGGG)n" FT repeat_region complement(4198455..4198485) FT /rpt_family="GC_rich" FT repeat_region complement(4198533..4198571) FT /rpt_family="GC_rich" FT repeat_region complement(4199249..4199299) FT /rpt_family="FLAM_A" FT repeat_region complement(4199300..4199508) FT /rpt_family="AluJo" FT repeat_region complement(4200507..4200819) FT /rpt_family="AluJo" FT repeat_region 4201598..4201900 FT /rpt_family="AluJo" FT repeat_region 4202284..4202570 FT /rpt_family="AluSq" FT repeat_region complement(4203043..4203345) FT /rpt_family="AluSx" FT repeat_region complement(4203346..4203645) FT /rpt_family="AluJb" FT repeat_region complement(4203652..4203946) FT /rpt_family="AluSx" FT repeat_region complement(4203959..4204259) FT /rpt_family="AluY" FT repeat_region 4204849..4204951 FT /rpt_family="AluSq/x" FT repeat_region 4204953..4205238 FT /rpt_family="AluY" FT repeat_region complement(4205257..4205335) FT /rpt_family="LINE2" FT repeat_region 4205563..4205855 FT /rpt_family="AluSx" FT repeat_region 4205858..4206159 FT /rpt_family="AluY" FT repeat_region 4206160..4206206 FT /rpt_family="(TAAA)n" FT repeat_region 4206210..4206413 FT /rpt_family="AluJo" FT repeat_region 4206417..4206517 FT /rpt_family="FLAM" FT repeat_region 4206524..4206637 FT /rpt_family="FLAM_C" FT repeat_region 4206673..4206757 FT /rpt_family="MIR" FT repeat_region complement(4206903..4207215) FT /rpt_family="AluJo" FT repeat_region 4207639..4207667 FT /rpt_family="MIR" FT repeat_region complement(4208364..4208579) FT /rpt_family="AluSq" FT repeat_region complement(4209106..4209404) FT /rpt_family="AluSx" FT repeat_region complement(4209445..4209742) FT /rpt_family="AluSx" FT repeat_region 4210435..4210585 FT /rpt_family="LINE2" FT repeat_region complement(4210826..4211129) FT /rpt_family="AluSq" FT repeat_region 4211354..4211651 FT /rpt_family="AluSx" FT repeat_region 4211816..4211858 FT /rpt_family="LINE2" FT repeat_region 4211871..4211908 FT /rpt_family="LINE2" FT repeat_region 4211916..4212215 FT /rpt_family="AluY" FT repeat_region 4212289..4212322 FT /rpt_family="LINE2" FT repeat_region 4212848..4213138 FT /rpt_family="AluSg" FT repeat_region complement(4213217..4213406) FT /rpt_family="(GGAA)n" FT repeat_region complement(4213407..4213450) FT /rpt_family="(GGAA)n" FT repeat_region complement(4213451..4213644) FT /rpt_family="AluSg/x" FT repeat_region complement(4213647..4213929) FT /rpt_family="AluSq" FT repeat_region 4214021..4214154 FT /rpt_family="(CA)n" FT repeat_region complement(4214166..4214414) FT /rpt_family="AluJb" FT repeat_region 4214570..4214866 FT /rpt_family="AluSx" FT repeat_region 4215112..4215200 FT /rpt_family="L1" FT repeat_region 4215201..4215262 FT /rpt_family="Alu" FT CDS join(<4207498..4207604,4207778..4207965,4208761..4208798, FT 4210262..4210369,4212567..4212695,4215975..4216026, FT 4216248..4216399,4216547..4217257,4219588..4219755, FT 4224124..4224189,4224425..4224502) FT /codon_start=1 FT /product="F20887_1, partial CDS" FT /note="Hypothetical human protein most similar to PID FT g1429314 and several ankyrin-like proteins" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC33490.1" FT /translation="SGATPLIIAAQMCHTDLCRLLLQQGAAANDQDLQGRTALMLACEG FT ASPETVEVLLQGGAQPGITDALGQDAAHYGALAGDKLILHLLQEAAQRPSPPSALTEDD FT SGEASSQDDRDAYEEIVRLRQERGRLLQKIRGLEQHKERRQQERQLSLHCCSQVQELQQ FT LLVERQEEKESLGREVESLQSRLSLLENERENTSYDVTTLQDEEGPQGLTLRPPPGAEV FT LLSRQLSPSAQEHLASLQEQVAVLTRQNQELMEKVQILENFEKDETQMEVEALAEVIPL FT ALYDSLRAEFDQLRRQHAEALQALRQQETREVPREEGAACGESEVAGATATKNGPTHME FT LNGSVAPETKVNGAETIDEEAAGDETMEARTMEAEATGAEATGAEATGAKVTETKPTGA FT EVREMETTEEEANMETKPTGAQATDTETTGVEAMGVEATKTKAEEAEMQAYGVGAGQAE FT PPVTGTTNMEATGSRATGMESTGVSATGVENPGVEATVQREALFMKSERHAAEAQLATA FT EQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKEAARDHSSVVALYRSHLLYAIQGQM FT DEDVQRILSQILQMQRLQAQGR" FT repeat_region 4215201..4215478 FT /rpt_family="AluSx" FT repeat_region 4215482..4215785 FT /rpt_family="AluJo" FT misc_feature 4215975..4216026 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 91.000" FT misc_feature 4216281..4216408 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature 4216547..4218160 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 92.000" FT repeat_region complement(4218294..4218596) FT /rpt_family="AluSq" FT repeat_region complement(4218655..4218746) FT /rpt_family="(GGAA)n" FT repeat_region complement(4218747..4218999) FT /rpt_family="AluJo" FT repeat_region 4219001..4219302 FT /rpt_family="AluSx" FT repeat_region 4219303..4219500 FT /rpt_family="AluJb" FT misc_feature 4219588..4219755 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(4219857..4219890) FT /rpt_family="MIR" FT repeat_region complement(4219974..4220266) FT /rpt_family="AluSx" FT repeat_region complement(4220278..4220456) FT /rpt_family="MIR" FT repeat_region complement(4220550..4220851) FT /rpt_family="AluY" FT repeat_region complement(4220901..4221072) FT /rpt_family="AluJ" FT repeat_region complement(4221076..4221364) FT /rpt_family="AluSx" FT repeat_region complement(4221395..4221524) FT /rpt_family="AluJ" FT repeat_region complement(4221535..4221639) FT /rpt_family="MIR" FT repeat_region 4221679..4221751 FT /rpt_family="MIR" FT repeat_region complement(4221786..4221988) FT /rpt_family="MER20" FT repeat_region complement(4222018..4222052) FT /rpt_family="LINE2" FT repeat_region 4222104..4222404 FT /rpt_family="AluSx" FT repeat_region 4222408..4222458 FT /rpt_family="MER58B" FT repeat_region 4222499..4222549 FT /rpt_family="MER58B" FT repeat_region complement(4222945..4223229) FT /rpt_family="AluSg" FT repeat_region complement(4223240..4223363) FT /rpt_family="AluJo/FRAM" FT repeat_region 4223366..4223398 FT /rpt_family="(TA)n" FT repeat_region complement(4223399..4223567) FT /rpt_family="AluSx" FT repeat_region complement(4223572..4223860) FT /rpt_family="AluSc" FT repeat_region complement(4223861..4223996) FT /rpt_family="AluSx" FT misc_feature 4224124..4224189 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 89.000" FT repeat_region 4224217..4224276 FT /rpt_family="MIR" FT misc_feature 4224425..4224502 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 90.000" FT repeat_region complement(4224949..4225246) FT /rpt_family="AluY" FT repeat_region complement(4225247..4225544) FT /rpt_family="AluSx" FT repeat_region 4225648..4225934 FT /rpt_family="AluJo" FT repeat_region complement(4226231..4226532) FT /rpt_family="AluSp" FT repeat_region complement(4226561..4226710) FT /rpt_family="(GA)n" FT repeat_region complement(4226714..4227014) FT /rpt_family="AluY" FT repeat_region complement(4227016..4227331) FT /rpt_family="AluSg" FT repeat_region complement(4227333..4227452) FT /rpt_family="(GAAA)n" FT repeat_region complement(4227474..4227771) FT /rpt_family="AluSx" FT repeat_region complement(4227843..4227961) FT /rpt_family="(CAGA)n" FT repeat_region complement(4227962..4228072) FT /rpt_family="(GA)n" FT repeat_region complement(4228073..4228283) FT /rpt_family="(GA)n" FT repeat_region complement(4228419..4228542) FT /rpt_family="(GA)n" FT repeat_region complement(4228549..4228609) FT /rpt_family="(GA)n" FT repeat_region complement(4228621..4228737) FT /rpt_family="(CAGA)n" FT repeat_region complement(4228712..4228828) FT /rpt_family="(GA)n" FT repeat_region complement(4228957..4229077) FT /rpt_family="(GA)n" FT repeat_region complement(4229083..4229190) FT /rpt_family="(CAGG)n" FT mRNA 4229540..4237525 FT /product="Human cytokine receptor (EBI3) mRNA" FT CDS join(4229548..4229614,4231188..4231320,4233126..4233304, FT 4234664..4234821,4236933..4237085) FT /codon_start=1 FT /product="Human cytokine receptor" FT /note="Novel interleukin-12 p40-related protein induced by FT latent Epstein-Barr virus infection in B lymphocytes" FT /protein_id="AAC33488.1" FT /translation="MTPQLLLALVLWASCPPCSGRKGPPAALTLPRVQCRASRYPIAVD FT CSWTLPPAPNSTSPVSFIATYRLGMAARGHSWPCLQQTPTSTSCTITDVQLFSMAPYVL FT NVTAVHPWGSSSSFVPFITEHIIKPDPPEGVRLSPLAERQLQVQWEPPGSWPFPEIFSL FT KYWIRYKRQGAARFHRVGPIEATSFILRAVRPRARYYVQVAAQDLTDYGELSDWSLPAT FT ATMSLGK" FT repeat_region complement(4229741..4229783) FT /rpt_family="MIR" FT repeat_region complement(4229915..4230220) FT /rpt_family="AluSx" FT repeat_region 4230281..4230589 FT /rpt_family="AluJo" FT repeat_region 4230599..4230889 FT /rpt_family="AluSx" FT repeat_region 4230956..4231022 FT /rpt_family="MIR" FT misc_feature 4231188..4231320 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: marginal, score: 49.000~~(23929..23999) FT DDS similarity to D58879|HUM515A09B Human placenta cDNA FT 5'-end GEN-515A09; (1..71); 100% identity.~~Additional EST FT matches: T48861, T49118, T48687" FT repeat_region 4231485..4231785 FT /rpt_family="AluSx" FT repeat_region 4231796..4231941 FT /rpt_family="AluJb" FT repeat_region 4231942..4232239 FT /rpt_family="AluSc" FT repeat_region 4232240..4232294 FT /rpt_family="(GAAAA)n" FT repeat_region 4232434..4232718 FT /rpt_family="AluJo" FT repeat_region 4232720..4232853 FT /rpt_family="(TGAA)n" FT misc_feature 4233126..4233304 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 96.000~~DDS similarity FT to overlapping ESTs:~(25805..25983) D58879|HUM515A09B Human FT placenta cDNA 5'-end GEN-515A09; (72..250); 100% FT identity.~~(25924..25983)D78905|HUM526C04B Human placenta FT cDNA 5'-end GEN-526C04; (1..60); 100% identity.~~Additional FT EST matches: T53559, T48687" FT repeat_region 4233359..4233913 FT /rpt_family="LINE2" FT repeat_region 4233920..4234222 FT /rpt_family="AluSx" FT repeat_region 4234275..4234424 FT /rpt_family="LINE2" FT repeat_region 4234425..4234572 FT /rpt_family="AluSg/x" FT repeat_region 4234589..4234624 FT /rpt_family="(TGAA)n" FT misc_feature 4234664..4234821 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~D58879|HUM515A09B Human FT placenta cDNA 5'-end GEN-515A09; (251..406); 98% FT identity.~~D78905|HUM526C04B Human placenta cDNA 5'-end FT GEN-526C04; (61..218); 100% identity.~~Additional EST FT matches: T58581" FT repeat_region complement(4235023..4235306) FT /rpt_family="AluSx" FT repeat_region complement(4235333..4235598) FT /rpt_family="AluSx" FT repeat_region 4235643..4235952 FT /rpt_family="AluJb" FT repeat_region 4235963..4236070 FT /rpt_family="AluSx" FT repeat_region 4236071..4236369 FT /rpt_family="AluSg" FT repeat_region 4236370..4236535 FT /rpt_family="AluSx" FT misc_feature 4236933..4237522 FT /note="(29612..29760) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 89.000~~DDS similarity to overlapping ESTs:~(29612..29659) FT D58879|HUM515A09B Human placenta cDNA 5'-end GEN-515A09; FT (407..454); 96% identity.~~(29612..29815) D78905|HUM526C04B FT Human placenta cDNA 5'-end GEN-526C04; (219..421); 99% FT identity.~~(29654..30106) R69150 yi44g01.r1 Homo sapiens FT cDNA clone 142128 3'. Score: 803 Identity: 438/460 FT (95%).~~(29674..30123) R82246 yj17e01.r1 Homo sapiens cDNA FT clone 149016 5'. Score: 785 Identity: 439/461 FT (95%).~~(30201..29756) N30247 yw64f07.s1 Homo sapiens cDNA FT clone 257029 3' similar to contains Alu repetitive FT element;contains element MER22 repetitive element ;.~Score: FT 859 Identity: 443/449 (98%).~~Additional EST matches: FT R66662, T49119, N30819, T54350, T51192, H02168, T58581, FT T48657 and many others" FT repeat_region 4237176..4237279 FT /rpt_family="MIR" FT repeat_region 4237383..4237670 FT /rpt_family="AluJo" FT repeat_region complement(4237671..4237698) FT /rpt_family="(CAAA)n" FT repeat_region 4237712..4238000 FT /rpt_family="AluSg" FT repeat_region 4238024..4238327 FT /rpt_family="AluSx" FT repeat_region 4238508..4238812 FT /rpt_family="AluSg" FT repeat_region 4238999..4239052 FT /rpt_family="LINE2" FT repeat_region 4239223..4239352 FT /rpt_family="AluJo" FT repeat_region 4239355..4239653 FT /rpt_family="AluSg" FT repeat_region 4239674..4239850 FT /rpt_family="AluJo" FT repeat_region 4239854..4240154 FT /rpt_family="AluSc" FT repeat_region 4240155..4240324 FT /rpt_family="AluJo/FRAM" FT repeat_region 4240326..4240628 FT /rpt_family="AluY" FT repeat_region 4240656..4240948 FT /rpt_family="AluJo" FT repeat_region complement(4240953..4241073) FT /rpt_family="AluJb" FT repeat_region 4241125..4241416 FT /rpt_family="AluJo" FT repeat_region 4241420..4241479 FT /rpt_family="MLT1D" FT repeat_region 4241550..4241848 FT /rpt_family="AluSx" FT repeat_region complement(4241938..4242370) FT /rpt_family="LOR1b" FT repeat_region complement(4242446..4242740) FT /rpt_family="AluSg" FT repeat_region complement(4242766..4242844) FT /rpt_family="AluSp/q" FT repeat_region complement(4242991..4243282) FT /rpt_family="AluSg" FT repeat_region complement(4243283..4243533) FT /rpt_family="AluSx" FT repeat_region complement(4243553..4243592) FT /rpt_family="(GA)n" FT repeat_region complement(4243637..4243760) FT /rpt_family="MER57_internal" FT repeat_region 4243807..4244110 FT /rpt_family="AluSp" FT repeat_region complement(4244120..4244194) FT /rpt_family="MER41D" FT repeat_region complement(4244203..4244500) FT /rpt_family="AluSx" FT repeat_region complement(4244515..4244619) FT /rpt_family="MER41D" FT repeat_region 4244620..4244902 FT /rpt_family="AluJb" FT repeat_region complement(4244914..4244963) FT /rpt_family="MER41D" FT repeat_region complement(4244965..4245197) FT /rpt_family="AluSp" FT repeat_region complement(4245198..4245347) FT /rpt_family="AluSp" FT repeat_region complement(4245364..4245679) FT /rpt_family="AluSx" FT repeat_region complement(4245680..4245862) FT /rpt_family="MER41D" FT repeat_region 4245864..4246108 FT /rpt_family="AluSx" FT repeat_region 4246200..4246481 FT /rpt_family="MER41A" FT repeat_region 4246751..4246812 FT /rpt_family="LINE2" FT misc_feature 4247129..4247167 FT /note="BLASTN similarity to F08341 (2..40); match: 1, FT score: 3.7e-50; database searched: est; HSCZRD011 FT normalized infant brain cDNA Homo sapiens cDNA clone FT c-zrd01, mRNA sequence [Homo sapiens]" FT CDS join(4247144..4247167,4249225..>4249325) FT /codon_start=1 FT /product="F20887_2, partial CDS" FT /note="Hypothetical human protein most similar to FT YKJ5_YEAST 32.3 KD PROTEIN" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC33489.1" FT /translation="MSERKVLNKYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNM" FT repeat_region complement(4247576..4247695) FT /rpt_family="(CA)n" FT repeat_region 4247755..4247860 FT /rpt_family="MER68B" FT repeat_region complement(4247862..4248165) FT /rpt_family="AluSq" FT repeat_region 4248167..4248216 FT /rpt_family="MER68A" FT repeat_region complement(4248312..4248432) FT /rpt_family="MIR" FT repeat_region 4248634..4248936 FT /rpt_family="AluSq" FT repeat_region complement(4248950..4249141) FT /rpt_family="MER68A" FT misc_feature complement(4249225..4249325) FT /note="BLASTN similarity to F08341 (41..141); match: 1, FT score: 3.7e-50; database searched: est; HSCZRD011 FT normalized infant brain cDNA Homo sapiens cDNA clone FT c-zrd01, mRNA sequence [Homo sapiens]~~predicted exon, FT program: grail2exons_human_1.3, frame: 2, quality: FT excellent, score: 100.000~" FT repeat_region 4249608..4249692 FT /rpt_family="LINE2" FT repeat_region complement(4249702..4250003) FT /rpt_family="AluSx" FT repeat_region complement(4250286..4250403) FT /rpt_family="LINE2" FT repeat_region complement(4343505..4343538) FT /rpt_family="GC_rich" FT repeat_region complement(4343569..4343654) FT /rpt_family="GC_rich" FT CDS join(<4343705..4343991,4345742..4345978,4352894..4353026, FT 4354042..4354126,4354321..4354417,4357250..4357418, FT 4357512..4357582,4358080..4358169,4359160..4359252, FT 4359913..4359999) FT /codon_start=3 FT /product="R31167_2, partial protein" FT /note="Alternative splice form of hypothetical protein FT R31167_1; CDS constructed from overlapping ESTs from human FT and mouse, combined with GRAIL predictions. Location of FT 5'-end of gene is uncertain, and may be in adjacent clone FT (BAC CIT-B-144d21) or in intervening gap. This alternative FT splice form observed only in human ESTs" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD24593.1" FT /translation="PEPLSPAGGAGEEAPEEDEDEAEAEDPERPNAGAGGGRSGGGGSS FT VSGGGGGGGAGAGGCGGPGGALTRRAVTLRVLLKDALLEPGAGVLSIYYLGKKFLGDLQ FT PDGRIMWQETGQTFNSPSAWATHCKKLVNPAKKSGCGWASVKYKGQKLDKYKATWLRLH FT QLHTPATAADESPASEGEEEELLMEEEEEDVLAGVSAEDKSRRPLGKSPSEPAHPEATT FT PGKRVDSKIRVPVRYCMLGSRDLARNPHTLVEVTSFAAINKFQPFNVAVSSNVLFLLIY FT QSLFLRGLSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQPCLALLCSPYYS FT GNPGPESKISPFWVMPPPEQRPSDYGIPMDVEMAYVQDSFLTNDILHEMMLLVEFYKGS FT PDLVRLQEPWSQEHTYLDKLKISLASRTPKDQSLCHVLEQVCGVLKQGS" FT misc_feature 4343705..4343991 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 71.000~~DDS similarity to FT AA213344 mu74a03.r1 Stratagene mouse embryonic carcinoma FT (#937317) Mus musculus cDNA clone 651244 5'; (1..112); 79% FT identity." FT CDS join(<4343705..4343991,4345742..4345978,4352894..4353026, FT 4354042..4354126,4354321..4354417,4354946..4355018, FT 4355094..4355170,4357250..4357418,4357512..4357582, FT 4358080..4358169,4359160..4359252,4359913..4359999) FT /codon_start=3 FT /product="R31167_1, partial protein" FT /note="Hypothetical human protein; CDS constructed from FT overlapping ESTs from human and mouse, combined with GRAIL FT predictions. Location of 5'-end of gene is uncertain, and FT may be in adjacent clone (BAC CIT-B-144d21) or in FT intervening gap" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD24592.1" FT /translation="PEPLSPAGGAGEEAPEEDEDEAEAEDPERPNAGAGGGRSGGGGSS FT VSGGGGGGGAGAGGCGGPGGALTRRAVTLRVLLKDALLEPGAGVLSIYYLGKKFLGDLQ FT PDGRIMWQETGQTFNSPSAWATHCKKLVNPAKKSGCGWASVKYKGQKLDKYKATWLRLH FT QLHTPATAADESPASEGEEEELLMEEEEEDVLAGVSAEDKSRRPLGKSPSEPAHPEATT FT PGKRVDSKIRVPVRYCMLGSRDLARNPHTLVEVTSFAAINKFQPFNVAVSSNVLFLLDF FT HSHLTRSEVVGYLGGRWDVNSQMLTVLRAFPCRSRLGDAETAAAIEEEIYQSLFLRGLS FT LVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQPCLALLCSPYYSGNPGPESKI FT SPFWVMPPPEQRPSDYGIPMDVEMAYVQDSFLTNDILHEMMLLVEFYKGSPDLVRLQEP FT WSQEHTYLDKLKISLASRTPKDQSLCHVLEQVCGVLKQGS" FT repeat_region 4343740..4343902 FT /rpt_family="(CGG)n" FT misc_feature 4344399..4344666 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 59.000" FT repeat_region 4344599..4344728 FT /rpt_family="MIR" FT repeat_region complement(4344734..4345037) FT /rpt_family="AluSg1" FT repeat_region complement(4345043..4345343) FT /rpt_family="AluSx" FT repeat_region complement(4345347..4345377) FT /rpt_family="(TAA)n" FT repeat_region complement(4345454..4345505) FT /rpt_family="LINE2" FT misc_feature 4345742..4345978 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(8885..9073) AA213344 FT mu74a03.r1 Stratagene mouse embryonic carcinoma (#937317) FT Mus musculus cDNA clone 651244 5'; (113..300); 86% FT identity.~~(8941..9121) T80218 yd03b01.r1 Homo sapiens cDNA FT clone 24532 5'; (1..180); 99% identity." FT repeat_region complement(4346416..4346707) FT /rpt_family="AluJb" FT repeat_region 4346746..4347043 FT /rpt_family="AluSc" FT repeat_region complement(4347071..4347222) FT /rpt_family="MLT2E" FT repeat_region complement(4347241..4347534) FT /rpt_family="AluY" FT misc_feature 4347748..4347849 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: marginal, score: 45.000" FT misc_feature complement(4347775..4347870) FT /note="BLASTX similarity to P41567 (82..113); match: 0.68, FT score: 2.2e-07; database searched: nr; PROTEIN TRANSLATION FT FACTOR SUI1 HOMOLOG (SUI1ISO1) >pir||JC2042 translation FT initiation factor eIF-2A - human" FT repeat_region complement(4347887..4348187) FT /rpt_family="AluSx" FT repeat_region complement(4348256..4348555) FT /rpt_family="AluSg" FT repeat_region complement(4348658..4348951) FT /rpt_family="AluSg" FT misc_feature complement(4348971..4349063) FT /note="BLASTX similarity to P41567 (1..31); match: 0.77, FT score: 3.7e-10; database searched: nr; PROTEIN TRANSLATION FT FACTOR SUI1 HOMOLOG (SUI1ISO1) >pir||JC2042 translation FT initiation factor eIF-2A - human" FT repeat_region complement(4349073..4349372) FT /rpt_family="AluSx" FT misc_feature 4349442..4349499 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 52.000" FT repeat_region complement(4349509..4349795) FT /rpt_family="AluSq" FT repeat_region complement(4349948..4350050) FT /rpt_family="LINE2" FT repeat_region complement(4350073..4350936) FT /rpt_family="LINE2" FT repeat_region complement(4351100..4351398) FT /rpt_family="AluSx" FT repeat_region complement(4351482..4351567) FT /rpt_family="MIR" FT repeat_region 4351578..4351877 FT /rpt_family="AluY" FT repeat_region 4351888..4352189 FT /rpt_family="AluSx" FT repeat_region 4352401..4352700 FT /rpt_family="AluSx" FT misc_feature 4352894..4353026 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 4352906..4352949 FT /rpt_family="(GGA)n" FT repeat_region complement(4353268..4353561) FT /rpt_family="AluSx" FT repeat_region complement(4353562..4353820) FT /rpt_family="AluJb" FT repeat_region complement(4353832..4353978) FT /rpt_family="AluJb" FT misc_feature 4354042..4354126 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 97.000~~DDS similarity FT to AA871862 vq41h10.r1 Barstead bowel MPLRB9 Mus musculus FT cDNA clone 1096867 5'; (17..98); 79% identity." FT misc_feature 4354321..4354417 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 97.000~~DDS similarity FT to overlapping ESTs:~AA871862 vq41h10.r1 Barstead bowel FT MPLRB9 Mus musculus cDNA clone 1096867 5'; (99..194); 88% FT identity.~~AA014480 mi67a04.r1 Soares mouse embryo NbME13.5 FT 14.5 Mus musculus cDNA clone 468558 5'; (1..97); 86% FT identity.~~(17495..17560) AA496318 zv28h10.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 755011 5' ; (1..66); FT 100% identity." FT repeat_region 4354497..4354539 FT /rpt_family="LINE2" FT repeat_region 4354582..4354868 FT /rpt_family="AluSx" FT misc_feature 4354946..4355018 FT /note="DDS similarity to overlapping ESTs:~AA871862 FT vq41h10.r1 Barstead bowel MPLRB9 Mus musculus cDNA clone FT 1096867 5'; (195..267); 88% identity.~~AA014480 mi67a04.r1 FT Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA clone FT 468558 5'; (98..170); 86% identity." FT misc_feature 4354946..4355170 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature 4355094..4355170 FT /note="DDS similarity to overlapping ESTs:~AA871862 FT vq41h10.r1 Barstead bowel MPLRB9 Mus musculus cDNA clone FT 1096867 5'; (268..344); 79% identity.~~AA014480 mi67a04.r1 FT Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA clone FT 468558 5'; (171..247); 80% identity." FT repeat_region complement(4355334..4355630) FT /rpt_family="AluY" FT repeat_region complement(4355631..4355765) FT /rpt_family="AluY" FT repeat_region complement(4355766..4355854) FT /rpt_family="AluY" FT repeat_region complement(4355855..4356148) FT /rpt_family="AluSg" FT repeat_region 4356207..4356243 FT /rpt_family="MIR" FT repeat_region 4356269..4356555 FT /rpt_family="AluJo" FT repeat_region complement(4356636..4356936) FT /rpt_family="AluSx" FT repeat_region complement(4356944..4357012) FT /rpt_family="LINE2" FT misc_feature 4357250..4357418 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 86.000~~DDS similarity FT to overlapping ESTs:~AA871862 vq41h10.r1 Barstead bowel FT MPLRB9 Mus musculus cDNA clone 1096867 5'; (345..513); 91% FT identity.~~AA014480 mi67a04.r1 Soares mouse embryo NbME13.5 FT 14.5 Mus musculus cDNA clone 468558 5'; (248..416); 89% FT identity.~~AA496318 zv28h10.r1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 755011 5' ; (67..235); 100% FT identity.~~(20476..20561) AA229011 nc50b01.s1 NCI_CGAP_Pr3 FT Homo sapiens cDNA clone IMAGE:1011529; (1..85); 87% FT identity." FT misc_feature 4357512..4357582 FT /note="DDS similarity to overlapping ESTs:~AA496318 FT zv28h10.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 755011 5' ; (236..306); 98% identity.~~(20655..20698) FT AA871862 vq41h10.r1 Barstead bowel MPLRB9 Mus musculus cDNA FT clone 1096867 5'; (514..557); 89% identity.~~AA014480 FT mi67a04.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus FT cDNA clone 468558 5'; (417..488); 88% FT identity.~~(20655..20725) AA229011 nc50b01.s1 NCI_CGAP_Pr3 FT Homo sapiens cDNA clone IMAGE:1011529; (86..156); 97% FT identity.~~AA402727 zu47f08.s1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 741159 3' similar to contains FT PTR5.t3 PTR5 repetitive element ; (418..348); 99% FT identity.~" FT repeat_region 4357687..4357749 FT /rpt_family="MIR" FT misc_feature 4358080..4358169 FT /note="DDS similarity to overlapping ESTs:~AA496318 FT zv28h10.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 755011 5' ; (307..398); 100% identity.~~AA229011 nc50b01.s1 FT NCI_CGAP_Pr3 Homo sapiens cDNA clone IMAGE:1011529; FT (157..246); 100% identity.~~AA402727 zu47f08.s1 Soares FT ovary tumor NbHOT Homo sapiens cDNA clone 741159 3' similar FT to contains PTR5.t3 PTR5 repetitive element ; (347..259); FT 99% identity.~~(21168..21312) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 92.000" FT repeat_region 4358514..4358803 FT /rpt_family="AluSx" FT misc_feature 4359160..4359252 FT /note="DDS similarity to overlapping ESTs:~AA229011 FT nc50b01.s1 NCI_CGAP_Pr3 Homo sapiens cDNA clone FT IMAGE:1011529; (247..339); 98% identity.~~(22303..22365) FT AA496318 zv28h10.r1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 755011 5' ; (399..459); 100% identity.~~AA402727 FT zu47f08.s1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 741159 3' similar to contains PTR5.t3 PTR5 repetitive FT element ; (258..166); 100% identity.~~predicted exon, FT program: grail2exons_human_1.3, frame: 0, quality: FT excellent, score: 100.000" FT misc_feature 4359913..4360077 FT /note="DDS similarity to overlapping ESTs:~(23056..23220) FT AA402727 zu47f08.s1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 741159 3' similar to contains PTR5.t3 PTR5 FT repetitive element ; (165..3); 100% FT identity.~~(23056..23106) AA229011 nc50b01.s1 NCI_CGAP_Pr3 FT Homo sapiens cDNA clone IMAGE:1011529; (340..390); 100% FT identity." FT mRNA complement(join(4360368..4361793,4362326..4362382, FT 4362609..4362733,4363367..4363470,4363717..4363875, FT 4364085..4364218,4365479..4365622,4366498..4366570, FT 4366923..4366995)) FT /product="H.sapiens mRNA for protein containing SH3 domain, FT SH3GL1" FT CDS complement(join(4361597..4361793,4362326..4362382, FT 4362609..4362733,4363367..4363470,4363717..4363875, FT 4364085..4364218,4365479..4365622,4366498..4366570, FT 4366923..4366991)) FT /codon_start=1 FT /product="SH3-containing Grb-2-like 1 protein" FT /note="Human homolog of Mus musculus endophilin II (encoded FT by U58885) and Rattus norvegicus SH3p8 (encoded by AF009602 FT and AB008161); SH3-containing protein EEN [Homo sapiens]; FT SH3-domain GRB2-like 1" FT /protein_id="AAD24591.1" FT /translation="MVSEKVGGAEGTKLDDDFKEMEKKVDVTSKAVTEVLARTIEYLQP FT NPASRAKLTMLNTVSKIRGQVKNPGYPQSEGLLGECMIRHGKELGGESNFGDALLDAGE FT SMKRLAEVKDSLDIEVKQNFIDPLQNLCEKDLKEIQHHLKKLEGRRLDFDYKKKRQGKI FT PDEELRQALEKFEESKEVAETSMHNLLETDIEQVSQLSALVDAQLDYHRQAVQILDELA FT EKLKRRMREASSRPKREYKPKPREPFDLGEPEQSNGGFPCTTAPKIAASSSFRSSDKPI FT RTPSRSMPPLDQPSCKALYDFEPENDGELGFHEGDVITLTNQIDENWYEGMLDGQSGFF FT PLSYVEVLVPLPQ" FT repeat_region complement(4364288..4364429) FT /rpt_family="FRAM" FT repeat_region complement(4364442..4364723) FT /rpt_family="AluSg" FT repeat_region complement(4364725..4364753) FT /rpt_family="(CAAAA)n" FT repeat_region complement(4364761..4364864) FT /rpt_family="AluSg/x" FT repeat_region complement(4364873..4364912) FT /rpt_family="(CA)n" FT repeat_region complement(4364913..4365051) FT /rpt_family="AluSp" FT repeat_region 4368787..4369088 FT /rpt_family="AluY" FT misc_feature complement(4369101..4369299) FT /note="BLASTN similarity to U66000 (664..862); match: 1, FT score: 1.5e-71; database searched: nt; Human AML patient FT genomic breakpoint junction with MLL-EEN fusion" FT misc_feature 4369688..4369756 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 81.000" FT repeat_region complement(4371977..4372104) FT /rpt_family="FLAM_C" FT repeat_region 4641871..4641951 FT /rpt_family="MIR" FT repeat_region 4641986..4642208 FT /rpt_family="AluJb" FT repeat_region 4642211..4642510 FT /rpt_family="AluSx" FT repeat_region complement(4642540..4642985) FT /rpt_family="LINE2" FT repeat_region 4643013..4643305 FT /rpt_family="AluSx" FT repeat_region 4643678..4643946 FT /rpt_family="AluSx" FT repeat_region 4643951..4644251 FT /rpt_family="AluSp" FT repeat_region 4644270..4644574 FT /rpt_family="AluJo" FT repeat_region complement(4644623..4644912) FT /rpt_family="AluSx" FT repeat_region 4645278..4645607 FT /rpt_family="AluSx" FT repeat_region 4645635..4645735 FT /rpt_family="AluJ/FLAM" FT repeat_region 4645902..4645995 FT /rpt_family="LINE2" FT repeat_region complement(4646175..4646438) FT /rpt_family="AluSq" FT repeat_region complement(4646441..4646647) FT /rpt_family="L1MB7" FT repeat_region complement(4646648..4646939) FT /rpt_family="AluY" FT repeat_region complement(4646942..4647322) FT /rpt_family="L1MB7" FT repeat_region complement(4647327..4647621) FT /rpt_family="AluSx" FT repeat_region complement(4647632..4647939) FT /rpt_family="AluJo" FT repeat_region 4647995..4648042 FT /rpt_family="LINE2" FT repeat_region complement(4648939..4649241) FT /rpt_family="AluSq" FT repeat_region complement(4649431..4649483) FT /rpt_family="MIR" FT repeat_region 4649620..4649684 FT /rpt_family="MIR" FT repeat_region 4650850..4651013 FT /rpt_family="AluY" FT repeat_region complement(4651014..4651043) FT /rpt_family="AT_rich" FT repeat_region 4651318..4651353 FT /rpt_family="AT_rich" FT repeat_region complement(4651363..4651478) FT /rpt_family="FLAM_C" FT repeat_region complement(4651492..4651758) FT /rpt_family="AluSq" FT misc_feature 4651882..4652442 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 92.000" FT repeat_region 4652854..4653029 FT /rpt_family="MLT1C" FT repeat_region 4653036..4653325 FT /rpt_family="AluY" FT repeat_region 4653346..4653478 FT /rpt_family="AluJ" FT repeat_region 4653487..4653801 FT /rpt_family="AluSc" FT repeat_region 4653816..4653968 FT /rpt_family="AluJ" FT repeat_region 4653992..4654165 FT /rpt_family="MLT1C" FT misc_feature complement(4654096..4654316) FT /note="BLASTN similarity to Z42385 (1..220); match: 0.97, FT score: 9.7e-83; database searched: est; H. sapiens partial FT cDNA sequence" FT misc_feature 4654156..4654321 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 77.000" FT repeat_region complement(4654354..4654619) FT /rpt_family="AluJb" FT repeat_region 4655576..4655696 FT /rpt_family="AluJ" FT repeat_region 4655710..4656010 FT /rpt_family="AluSx" FT repeat_region 4656013..4656171 FT /rpt_family="AluJ" FT repeat_region complement(4656600..4656904) FT /rpt_family="AluJo" FT repeat_region 4656956..4657251 FT /rpt_family="AluJb" FT misc_feature complement(4657557..4658096) FT /note="DDS similarity to overlapping ESTs:~(25329..25201) FT AA477269 zu43c12.s1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 740758 3'; (401..273); 100% FT identity.~~(25329..25201) A477268 zu43c12.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 740758 5'; (221..349); FT 100% identity.~~(25061..24842) A477268 zu43c12.r1 Soares FT ovary tumor NbHOT Homo sapiens cDNA clone 740758 5'; FT (350..570); 98% identity.~~(24792..25272) N32339 yw82g08.s1 FT Homo sapiens cDNA clone 258782 3'. Score: 925 Identity: FT 476/480 (99%).~~(25329..25028) AA579149 nf28a04.s1 FT NCI_CGAP_Pr1 Homo sapiens cDNA clone IMAGE:915054; FT (134..434); 99% identity.~~(24790..25061) AA477269 FT zu43c12.s1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 740758 3'; (272..1); 100% identity.~~Additional EST FT matches:~AA581955, AA467935, AI038745, AI041764, T24716" FT CDS complement(join(4658017..4658096,4659943..4660015, FT 4660681..4660762,4664888..>4664952)) FT /codon_start=1 FT /product="R33729_1" FT /note="Hypothetical partial human protein" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC27824.1" FT /translation="QQWQMSLGTSEDHQHFTCTIWRPQGKSYLYFTQFKAEVRGAEIEY FT AMAYSKAAFERESDVPLKTEEFEVTKTAVAHRPGAFKAELSKLVIVAKASRTEL" FT repeat_region complement(4658789..4658816) FT /rpt_family="AT_rich" FT repeat_region complement(4658817..4659090) FT /rpt_family="AluSg" FT repeat_region complement(4659094..4659254) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(4659255..4659535) FT /rpt_family="AluSx" FT repeat_region complement(4659551..4659672) FT /rpt_family="FLAM_A" FT repeat_region complement(4659677..4659832) FT /rpt_family="MER58B" FT misc_feature complement(4659943..4660015) FT /note="DDS similarity to overlapping ESTs:~AA477269 FT zu43c12.s1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 740758 3'; (474..402); 100% identity.~~A477268 zu43c12.r1 FT Soares ovary tumor NbHOT Homo sapiens cDNA clone 740758 5'; FT (148..220); 100% identity.~~AA579149 nf28a04.s1 FT NCI_CGAP_Pr1 Homo sapiens cDNA clone IMAGE:915054; FT (61..133); 100% identity." FT repeat_region complement(4660144..4660439) FT /rpt_family="AluJo" FT misc_feature complement(4660624..4660762) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 89.000" FT misc_feature complement(4660681..4660762) FT /note="DDS similarity to overlapping ESTs:~(27995..27914) FT AA477268 zu43c12.r1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 740758 5'; (66..147); 100% FT identity.~~(27984..27914) AA477269 zu43c12.s1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 740758 3'; (545..475); FT 100% identity.~~(27966..27914) AA579149 nf28a04.s1 FT NCI_CGAP_Pr1 Homo sapiens cDNA clone IMAGE:915054; (8..60); FT 100% identity.~" FT repeat_region complement(4660979..4661277) FT /rpt_family="AluSx" FT repeat_region complement(4662934..4663056) FT /rpt_family="(GGA)n" FT repeat_region 4663987..4664336 FT /rpt_family="L1MB5" FT repeat_region 4664340..4664520 FT /rpt_family="AluSg/x" FT misc_feature 4664792..4664902 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 78.000" FT misc_feature complement(4664888..4664952) FT /note="DDS similarity to AA477268 zu43c12.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 740758 5'; (1..65); 99% FT identity." FT CDS complement(join(<4659944..4660015,4660681..4660762, FT 4664888..4664949,4668607..4668657,4670158..4670346)) FT /codon_start=1 FT /product="R33729_1, partial CDS" FT /note="Hypothetical partial human protein" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC33800.1" FT /translation="MAAPSGGWNGVGASLWAALLLGAVALRPAEAVSEPTTVAFDVRPG FT GVVHSFSHNVGPGVRATADKYTCMFTYASQGGTNEQWQMSLGTSEDHQHFTCTIWRPQG FT KSYLYFTQFKAEVRGAEIEYAMAYSKAAFERESDVPLKTEEFEVTKTA" FT repeat_region complement(4665233..4665516) FT /rpt_family="AluJb" FT repeat_region 4665552..4665852 FT /rpt_family="AluY" FT repeat_region 4666048..4666168 FT /rpt_family="FLAM_C" FT repeat_region 4666178..4666285 FT /rpt_family="L1MD1" FT repeat_region complement(4666286..4666587) FT /rpt_family="AluSx" FT repeat_region 4666795..4666905 FT /rpt_family="AluSq/x" FT repeat_region complement(4666909..4667061) FT /rpt_family="MLT1E" FT repeat_region complement(4667139..4667438) FT /rpt_family="AluY" FT repeat_region complement(4667440..4667583) FT /rpt_family="AluSq/x" FT repeat_region 4667626..4667722 FT /rpt_family="MLT1E" FT repeat_region complement(4667727..4667923) FT /rpt_family="AluJb" FT repeat_region complement(4667938..4668205) FT /rpt_family="AluSx" FT repeat_region 4668225..4668340 FT /rpt_family="MLT1E" FT misc_feature complement(4668607..4668657) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 73.000" FT repeat_region complement(4668698..4669019) FT /rpt_family="AluJo" FT repeat_region 4669204..4669480 FT /rpt_family="AluSx" FT repeat_region 4669481..4669604 FT /rpt_family="AluSg/x" FT repeat_region complement(4670073..4670133) FT /rpt_family="GC_rich" FT misc_feature complement(4670143..4670346) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 82.000" FT repeat_region complement(4670530..4670573) FT /rpt_family="GC_rich" FT repeat_region complement(4670836..4671107) FT /rpt_family="AluSq" FT repeat_region 4671111..4671285 FT /rpt_family="L1MD3" FT repeat_region 4671298..4671344 FT /rpt_family="MIR" FT repeat_region 4671776..4671895 FT /rpt_family="FLAM_C" FT repeat_region complement(4671913..4672010) FT /rpt_family="(TA)n" FT repeat_region 4672013..4672150 FT /rpt_family="(TA)n" FT repeat_region 4672153..4672186 FT /rpt_family="(TA)n" FT repeat_region complement(4672189..4672307) FT /rpt_family="(TA)n" FT repeat_region 4672310..4672348 FT /rpt_family="(TA)n" FT repeat_region complement(4672352..4672491) FT /rpt_family="(TA)n" FT repeat_region 4672519..4672689 FT /rpt_family="AluSg/x" FT repeat_region 4673068..4673333 FT /rpt_family="AluJb" FT repeat_region 4673346..4673490 FT /rpt_family="AluJo" FT repeat_region complement(4673590..4673894) FT /rpt_family="AluJb" FT repeat_region complement(4673922..4674200) FT /rpt_family="AluJb" FT repeat_region complement(4674213..4674300) FT /rpt_family="FLAM_A" FT repeat_region complement(4674361..4674660) FT /rpt_family="AluJb" FT repeat_region complement(4675344..4675388) FT /rpt_family="POLY_A" FT repeat_region complement(4675781..4676084) FT /rpt_family="AluSp" FT CDS complement(join(4676576..4676691,4679843..4679958, FT 4682708..4682850,4683489..4683641,4684675..4684821, FT 4685638..4685756,4688769..4688904,4689582..4689734, FT 4694650..4694835,4695390..4695567,4697584..>4697663)) FT /codon_start=1 FT /product="R26984_1" FT /note="Hypothetical human protein most similar to protein FT encoded by AF043699 [Caenorhabditis elegans]; Contains FT similarity to the prolyl oligopeptidase family" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC33801.1" FT /translation="IVSTQEKELVQPFSSLFPKVEYIARAGAWAMFLDRPQQWLQLVLL FT PPALFIPSTENEEQRLASARAVPRNVQPYVVYEEVTNVWINVHDIFYPFPQSEGEDELC FT FLRANECKTGFCHLYKVTAVLKSQGYDWSEPFSPGEGEQSLTNAIWVNEETKLVYFQGT FT KDTPLEHHLYVVSYEAAGEIVRLTTPGFSHSCSMSQNFDMFVSHYSSVSTPPCVHVYKL FT SGPDDDPLHKQPRFWASMMEAAKIFHFHTRSDVRLYGMIYKPHALQPGKKHPTVLFVYG FT GPQVQLVNNSFKGIKYLRLNTLASLGYAVVVIDGRGSCQRGLRFEGALKNQMGQVEIED FT QVEGLQFVAEKYGFIDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYD FT TGYTERYMDVPENNQHGYEAGSVALHVEKLPNEPNRLLILHGFLDENVHFFHTNFLVSQ FT LIRAGKPYQLQVALPPVSPQIYPNERHSIRCPESGEHYEVTLLHFLQEYL" FT misc_feature complement(4676576..4676668) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 84.000" FT repeat_region complement(4678123..4678424) FT /rpt_family="AluSx" FT misc_feature complement(4679847..4679958) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 4680010..4680267 FT /rpt_family="AluSg" FT repeat_region 4680269..4680435 FT /rpt_family="AluJo/FRAM" FT repeat_region 4680446..4680667 FT /rpt_family="AluJo" FT repeat_region 4680688..4680984 FT /rpt_family="AluSx" FT repeat_region 4681083..4681122 FT /rpt_family="MER33" FT repeat_region 4681161..4681269 FT /rpt_family="L1MB5" FT repeat_region complement(4681334..4681558) FT /rpt_family="AluSg/x" FT repeat_region complement(4681578..4681844) FT /rpt_family="AluSx" FT repeat_region complement(4681857..4682159) FT /rpt_family="AluY" FT misc_feature complement(4682708..4682850) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region complement(4683130..4683182) FT /rpt_family="GC_rich" FT misc_feature complement(4683485..4683641) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 4683836..4683925 FT /rpt_family="MIR" FT repeat_region 4684281..4684414 FT /rpt_family="MLT1A1" FT misc_feature complement(4684675..4684821) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 99.000" FT misc_feature complement(4685638..4685756) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 97.000" FT repeat_region complement(4685953..4686048) FT /rpt_family="AluJo" FT repeat_region complement(4686161..4686327) FT /rpt_family="AluSx" FT repeat_region complement(4686331..4686631) FT /rpt_family="AluSx" FT repeat_region complement(4686633..4686714) FT /rpt_family="AluSx" FT repeat_region 4686800..4686954 FT /rpt_family="MER58A" FT repeat_region complement(4687816..4688107) FT /rpt_family="AluY" FT repeat_region complement(4688122..4688417) FT /rpt_family="AluJo" FT misc_feature complement(4688769..4688904) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 88.000" FT repeat_region complement(4689053..4689107) FT /rpt_family="MIR" FT misc_feature complement(4689582..4689734) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(4690749..4690840) FT /rpt_family="(CA)n" FT repeat_region 4691215..4691504 FT /rpt_family="AluJo" FT repeat_region complement(4691686..4691989) FT /rpt_family="AluSq" FT repeat_region complement(4692014..4692130) FT /rpt_family="AluJb" FT repeat_region 4693090..4693226 FT /rpt_family="MER20" FT repeat_region 4693241..4693632 FT /rpt_family="LINE2" FT repeat_region 4693744..4694174 FT /rpt_family="LINE2" FT repeat_region 4694208..4694425 FT /rpt_family="MER58A" FT misc_feature complement(4694673..4694835) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 98.000" FT repeat_region 4694878..4695180 FT /rpt_family="AluJo" FT misc_feature complement(4695390..4695620) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 87.000" FT repeat_region complement(4695914..4696212) FT /rpt_family="AluSq" FT repeat_region 4696354..4696488 FT /rpt_family="FLAM_C" FT repeat_region 4696493..4696776 FT /rpt_family="AluSc" FT repeat_region 4696927..4697122 FT /rpt_family="AluJo" FT misc_feature complement(4697562..4697663) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 87.000" FT repeat_region 4697745..4698086 FT /rpt_family="MLT1B" FT repeat_region 4698482..4698778 FT /rpt_family="AluJb" FT repeat_region 4698889..4699125 FT /rpt_family="AluY" FT CDS complement(join(<4697584..4697663,4700228..4700289, FT 4702039..4702161,4702615..4702728,4703898..4704066, FT 4704122..4704316,4705870..4705982,4714093..4714369, FT 4714821..4714982)) FT /codon_start=1 FT /product="R33083_1" FT /note="Hypothetical partial human protein most similar to FT Caenorhabditis elegans ORF encoded by (AF043699) contains FT similarity to the; Should represent 5'-end of hypothetical FT protein R26894_1 encoded by AC005594. Predicted primarily FT on basis of Xgrail and BLAST similarities" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC62840.1" FT /translation="MHSEQEGQHVQRPCGGKEFGLFEELSEGSFGWVTGIRRMRFKGLA FT GVDSSLEVVSLLPPRSFSLNSEGAERMATTGTPTADRGDAAATDDPAARFQVQKHSWDG FT LRSIIHGSRKYSGLIVNKAPHDFQFVQKTDESGPHSHRLYYLGMPYGSRENSLLYSEIP FT KKVRKEALLLLSWKQMLDHFQATPHHGVYSREEELLRERKRLGVFGITSYDFHSESGLF FT LFQASNSLFHCRDGGKNGFMVSPGPGCVSPMKPLEIKTQCSGPRMDPKICPADPAFFSF FT INNSDLWVANIETGEERRLTFCHQGLSNVLDDPKSAGVATFVIQEEFDRFTGYWWCPTA FT SWEEGLKTLRILYEEVDESEVEVIHVPSPALEERKTDSYRYPRTGSKNPKIALKLAEFQ FT TDSQGKIVSTQEKELVQPFSSLFPKVEYIARAG" FT repeat_region 4698889..4699190 FT /rpt_family="AluY" FT misc_feature complement(4700228..4700289) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 4700924..4700985 FT /rpt_family="MIR" FT repeat_region 4701199..4701499 FT /rpt_family="AluJo" FT repeat_region complement(4701521..4701839) FT /rpt_family="MER58B" FT misc_feature complement(4702039..4702192) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 98.000" FT repeat_region 4702286..4702366 FT /rpt_family="MIR" FT misc_feature complement(4702615..4702728) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 4702802..4702884 FT /rpt_family="(GA)n" FT repeat_region complement(4702907..4703086) FT /rpt_family="MER20" FT repeat_region 4703355..4703626 FT /rpt_family="AluSq" FT misc_feature complement(4703898..4704066) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(4704122..4704316) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(4704420..4704537) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 53.000" FT repeat_region 4704755..4705025 FT /rpt_family="AluSg" FT repeat_region complement(4705242..4705495) FT /rpt_family="AluJo" FT misc_feature complement(4705870..4705982) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region 4706227..4706359 FT /rpt_family="FLAM_C" FT repeat_region 4706362..4706428 FT /rpt_family="(GAAA)n" FT repeat_region 4706546..4706838 FT /rpt_family="AluSx" FT repeat_region complement(4706860..4707070) FT /rpt_family="MER20" FT repeat_region 4707085..4707173 FT /rpt_family="MIR" FT repeat_region complement(4707636..4707937) FT /rpt_family="AluSx" FT repeat_region 4708515..4708935 FT /rpt_family="L1PA12" FT repeat_region complement(4708937..4709229) FT /rpt_family="AluSg" FT repeat_region 4709558..4709805 FT /rpt_family="L1MB7" FT repeat_region 4711326..4711502 FT /rpt_family="MLT1C" FT repeat_region 4711503..4711804 FT /rpt_family="AluSx" FT repeat_region 4711820..4712039 FT /rpt_family="MLT1C" FT repeat_region 4712281..4712581 FT /rpt_family="AluJo" FT repeat_region 4713038..4713221 FT /rpt_family="MER20" FT misc_feature complement(4714093..4714349) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(4714574..4714702) FT /rpt_family="FLAM_C" FT repeat_region 4714768..4714991 FT /rpt_family="LINE2" FT repeat_region complement(4715039..4715334) FT /rpt_family="AluSq" FT repeat_region 4715508..4715592 FT /rpt_family="LINE2" FT repeat_region 4716368..4716668 FT /rpt_family="AluY" FT repeat_region complement(4716731..4716836) FT /rpt_family="MIR" FT repeat_region complement(4718099..4718232) FT /rpt_family="FLAM_C" FT repeat_region 4719073..4719358 FT /rpt_family="AluSg" FT repeat_region 4719359..4719382 FT /rpt_family="(TAAA)n" FT repeat_region 4719488..4719694 FT /rpt_family="MER20" FT misc_feature 4719895..4719999 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 82.000" FT repeat_region 4720337..4720520 FT /rpt_family="LINE2" FT repeat_region 4720608..4720815 FT /rpt_family="MER20" FT repeat_region 4721061..4721249 FT /rpt_family="MER20" FT repeat_region 4721267..4721381 FT /rpt_family="LINE2" FT repeat_region 4721512..4721806 FT /rpt_family="AluSx" FT repeat_region 4721896..4722118 FT /rpt_family="MIR" FT repeat_region complement(4723065..4723103) FT /rpt_family="tRNA-Gly-GGA" FT repeat_region complement(4723647..4723707) FT /rpt_family="GC_rich" FT misc_feature complement(4723900..4724173) FT /note="BLASTN similarity to X64281 (1005..1279); match: FT 0.99, score: 2.6e-95; database searched: nt; H.sapiens FT variant gene for tRNA-Val (anticodon:CAC) and tRNA-Gly FT (anticodon:UCC)" FT repeat_region complement(4723910..4723946) FT /rpt_family="GC_rich" FT repeat_region 4724082..4724153 FT /rpt_family="tRNA-Gly-GGA" FT repeat_region complement(4724181..4724372) FT /rpt_family="AluSx" FT repeat_region 4724373..4724408 FT /rpt_family="POLY_G" FT repeat_region complement(4724409..4724508) FT /rpt_family="AluSx" FT misc_feature 4724527..4724739 FT /note="BLASTN similarity to Z59776 (1..214); match: 0.98, FT score: 1.9e-78; database searched: nt; H.sapiens CpG DNA, FT clone 172e6, forward read cpg172e6.ft1a ." FT misc_feature complement(4724527..4724739) FT /note="BLASTN similarity to Z59777 (1..214); match: 0.99, FT score: 1.0e-73; database searched: nt; H.sapiens CpG DNA, FT clone 172e6, reverse read cpg172e6.rt1a ." FT misc_feature complement(4724527..4725095) FT /note="BLASTN similarity to X17515 (82..650); match: 0.99, FT score: 2.4e-234; database searched: nt; Human gene for FT variant cytoplasmic tRNA-Val(CAC)~~BLASTN similarity to FT X64281 (82..650); match: 1, score: 1.9e-234; database FT searched: nt; H.sapiens variant gene for tRNA-Val FT (anticodon:CAC) and tRNA-Gly (anticodon:UCC)" FT repeat_region complement(4724647..4724719) FT /rpt_family="tRNA-Val-GTG" FT misc_feature complement(4725094..4725109) FT /note="BLASTN similarity to X64281 (69..84); match: 1, FT score: 1.9e-234; database searched: nt; H.sapiens variant FT gene for tRNA-Val (anticodon:CAC) and tRNA-Gly FT (anticodon:UCC)~~BLASTN similarity to X17515 (69..84); FT match: 1, score: 2.4e-234; database searched: nt; Human FT gene for variant cytoplasmic tRNA-Val(CAC)" FT repeat_region complement(4725125..4725325) FT /rpt_family="AluJo" FT repeat_region complement(4725328..4725505) FT /rpt_family="AluJb" FT repeat_region complement(4725568..4725849) FT /rpt_family="AluSq" FT repeat_region complement(4726068..4726333) FT /rpt_family="AluSx" FT repeat_region 4726359..4726633 FT /rpt_family="AluY" FT repeat_region 4726653..4726951 FT /rpt_family="AluY" FT repeat_region 4726952..4727026 FT /rpt_family="(TAAA)n" FT repeat_region complement(4727131..4727419) FT /rpt_family="AluJo" FT repeat_region 4727537..4727836 FT /rpt_family="AluSx" FT repeat_region 4727849..4728043 FT /rpt_family="AluJo" FT repeat_region 4728048..4728079 FT /rpt_family="(CA)n" FT repeat_region complement(4728117..4728423) FT /rpt_family="AluY" FT repeat_region complement(4728447..4728737) FT /rpt_family="AluSq" FT repeat_region complement(4728739..4728904) FT /rpt_family="MLT1B" FT repeat_region complement(4729121..4729418) FT /rpt_family="AluSx" FT repeat_region 4729531..4729820 FT /rpt_family="AluSx" FT repeat_region 4729852..4730454 FT /rpt_family="LINE2" FT repeat_region 4730457..4730747 FT /rpt_family="AluSp" FT repeat_region 4730751..4731253 FT /rpt_family="LINE2" FT repeat_region 4731327..4731631 FT /rpt_family="AluSx" FT repeat_region 4732025..4732320 FT /rpt_family="AluSx" FT repeat_region 4732324..4732622 FT /rpt_family="AluY" FT misc_feature 4732985..4733096 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 64.000" FT repeat_region complement(4733025..4733070) FT /rpt_family="MER65C" FT repeat_region 4733105..4733400 FT /rpt_family="AluSx" FT repeat_region 4733530..4733851 FT /rpt_family="AluJo" FT repeat_region 4733852..4733909 FT /rpt_family="(GA)n" FT repeat_region 4733910..4734104 FT /rpt_family="(GA)n" FT repeat_region complement(4734122..4734246) FT /rpt_family="MIR" FT repeat_region complement(4734246..4734342) FT /rpt_family="MIR" FT repeat_region 4734385..4734437 FT /rpt_family="(TAAAA)n" FT repeat_region 4734481..4734776 FT /rpt_family="AluJo" FT repeat_region 4734791..4735088 FT /rpt_family="AluSx" FT repeat_region 4735094..4735173 FT /rpt_family="(GA)n" FT repeat_region 4735284..4735581 FT /rpt_family="AluSp" FT repeat_region 4735891..4736193 FT /rpt_family="AluY" FT repeat_region complement(4736194..4736240) FT /rpt_family="MIR" FT repeat_region complement(4736260..4736413) FT /rpt_family="AluJo/FRAM" FT repeat_region 4736520..4736721 FT /rpt_family="MER20" FT repeat_region 4736917..4737049 FT /rpt_family="AluJo/FRAM" FT repeat_region 4737057..4737358 FT /rpt_family="AluSx" FT repeat_region 4737360..4737535 FT /rpt_family="(CATA)n" FT repeat_region 4737541..4737666 FT /rpt_family="AluJo/FLAM" FT repeat_region 4737669..4737965 FT /rpt_family="AluJo" FT misc_feature complement(4738329..4738371) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 61.000" FT repeat_region complement(4739138..4739437) FT /rpt_family="AluY" FT repeat_region 4739473..4739772 FT /rpt_family="AluSx" FT repeat_region 4739879..4740173 FT /rpt_family="AluSx" FT repeat_region complement(4740254..4740558) FT /rpt_family="AluJo" FT repeat_region complement(4740581..4740822) FT /rpt_family="AluY" FT repeat_region complement(4740581..4740880) FT /rpt_family="AluY" FT repeat_region complement(4740906..4741191) FT /rpt_family="AluJb" FT repeat_region 4741326..4741617 FT /rpt_family="AluSg" FT repeat_region complement(4741647..4741684) FT /rpt_family="(TAA)n" FT repeat_region complement(4741685..4741909) FT /rpt_family="AluSg/x" FT repeat_region complement(4741918..4741938) FT /rpt_family="AT_rich" FT repeat_region complement(4742037..4742200) FT /rpt_family="FRAM" FT repeat_region complement(4742316..4742439) FT /rpt_family="(CA)n" FT repeat_region complement(4742577..4742640) FT /rpt_family="(CA)n" FT repeat_region complement(4742894..4742965) FT /rpt_family="(GGA)n" FT repeat_region 4743251..4743346 FT /rpt_family="(GGGA)n" FT repeat_region 4743413..4743536 FT /rpt_family="(CAGA)n" FT repeat_region 4743506..4743625 FT /rpt_family="(GA)n" FT repeat_region 4743630..4743844 FT /rpt_family="AluJo" FT repeat_region 4743853..4744153 FT /rpt_family="AluSc" FT repeat_region 4744157..4744456 FT /rpt_family="AluY" FT repeat_region 4744470..4744524 FT /rpt_family="AluSq/x" FT repeat_region 4744563..4744766 FT /rpt_family="AluSq" FT repeat_region complement(4745066..4745316) FT /rpt_family="L1M2" FT repeat_region complement(4745321..4745617) FT /rpt_family="AluSg" FT repeat_region complement(4745618..4745756) FT /rpt_family="AluSq/x" FT repeat_region complement(4745765..4746074) FT /rpt_family="AluJo" FT repeat_region complement(4746138..4746322) FT /rpt_family="AluSg/x" FT repeat_region 4746323..4746435 FT /rpt_family="MLT1G" FT repeat_region 4746461..4746593 FT /rpt_family="AluSg1" FT repeat_region 4746594..4746894 FT /rpt_family="AluSx" FT repeat_region 4746895..4747062 FT /rpt_family="AluSg1" FT repeat_region 4747063..4747096 FT /rpt_family="(CAAAA)n" FT repeat_region complement(4747286..4747403) FT /rpt_family="(GA)n" FT repeat_region complement(4747404..4747703) FT /rpt_family="AluSx" FT repeat_region complement(4747730..4747898) FT /rpt_family="(GA)n" FT repeat_region complement(4747891..4748073) FT /rpt_family="(CAGA)n" FT repeat_region complement(4748626..4748750) FT /rpt_family="L1MD3" FT repeat_region 4748986..4749119 FT /rpt_family="FLAM_C" FT repeat_region 4749160..4749442 FT /rpt_family="AluJb" FT repeat_region 4749447..4749755 FT /rpt_family="AluSx" FT repeat_region 4749971..4750089 FT /rpt_family="(CA)n" FT repeat_region complement(4750200..4750279) FT /rpt_family="(GA)n" FT repeat_region complement(4750626..4750926) FT /rpt_family="AluY" FT repeat_region complement(4750938..4751233) FT /rpt_family="AluSx" FT repeat_region complement(4751289..4751323) FT /rpt_family="AT_rich" FT repeat_region complement(4751386..4751539) FT /rpt_family="AluJo/FRAM" FT repeat_region 4751578..4751877 FT /rpt_family="AluSx" FT repeat_region 4751880..4751984 FT /rpt_family="(GGAA)n" FT repeat_region 4751989..4752285 FT /rpt_family="AluSx" FT repeat_region 4752773..4753058 FT /rpt_family="AluSx" FT repeat_region 4753060..4753359 FT /rpt_family="AluY" FT repeat_region 4753360..4753443 FT /rpt_family="AluS" FT repeat_region complement(4753444..4753535) FT /rpt_family="MER66B" FT repeat_region complement(4753541..4753699) FT /rpt_family="AluSx" FT repeat_region complement(4753700..4753990) FT /rpt_family="AluSp" FT repeat_region complement(4753991..4754126) FT /rpt_family="AluSx" FT repeat_region complement(4754135..4754511) FT /rpt_family="MER66B" FT repeat_region complement(4754610..4754893) FT /rpt_family="AluY" FT repeat_region complement(4754967..4755130) FT /rpt_family="MER20" FT repeat_region 4755283..4755584 FT /rpt_family="AluSx" FT repeat_region 4755660..4755795 FT /rpt_family="L1MC4" FT repeat_region 4755846..4755938 FT /rpt_family="L1MC4" FT repeat_region 4755959..4756270 FT /rpt_family="AluY" FT repeat_region 4756306..4756441 FT /rpt_family="AluSq/x" FT repeat_region 4756442..4756733 FT /rpt_family="AluSx" FT repeat_region 4756762..4757051 FT /rpt_family="L1MB4" FT repeat_region 4757067..4757226 FT /rpt_family="FRAM" FT repeat_region 4757280..4757410 FT /rpt_family="AluSc" FT repeat_region 4757411..4757677 FT /rpt_family="MER7B" FT repeat_region 4757679..4757967 FT /rpt_family="AluSx" FT repeat_region complement(4758229..4758402) FT /rpt_family="FAM" FT repeat_region 4758488..4758541 FT /rpt_family="MLT1F" FT repeat_region 4758542..4758839 FT /rpt_family="AluJb" FT repeat_region 4758840..4758879 FT /rpt_family="MLT1F" FT repeat_region complement(4758894..4759196) FT /rpt_family="AluSg" FT repeat_region 4759326..4759441 FT /rpt_family="MIR" FT repeat_region 4759727..4759787 FT /rpt_family="(GGGA)n" FT repeat_region 4760479..4760565 FT /rpt_family="MIR" FT repeat_region 4760577..4760858 FT /rpt_family="AluSx" FT repeat_region 4761115..4761251 FT /rpt_family="FLAM_C" FT repeat_region complement(4761333..4761623) FT /rpt_family="AluSq" FT repeat_region complement(4761677..4761725) FT /rpt_family="LINE2" FT repeat_region complement(4762216..4762507) FT /rpt_family="AluJo" FT repeat_region 4763503..4763643 FT /rpt_family="MIR" FT repeat_region complement(4764242..4764291) FT /rpt_family="(CA)n" FT repeat_region 4764649..4764776 FT /rpt_family="AluSq/x" FT repeat_region 4764778..4765109 FT /rpt_family="L1MD2" FT repeat_region 4765110..4765409 FT /rpt_family="AluSx" FT repeat_region 4765632..4765909 FT /rpt_family="AluJo" FT repeat_region complement(4765929..4766229) FT /rpt_family="AluSg" FT repeat_region complement(4766245..4766289) FT /rpt_family="(GA)n" FT repeat_region complement(4766290..4766581) FT /rpt_family="AluSq" FT repeat_region complement(4766600..4766728) FT /rpt_family="(GAAA)n" FT repeat_region complement(4766754..4767053) FT /rpt_family="AluSp" FT repeat_region complement(4767067..4767367) FT /rpt_family="AluSx" FT repeat_region 4767368..4767458 FT /rpt_family="MIR" FT repeat_region complement(4767991..4768318) FT /rpt_family="AluJo" FT repeat_region complement(4768470..4768511) FT /rpt_family="MIR" FT misc_feature complement(4769688..4769791) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 74.000" FT repeat_region complement(4769918..4770212) FT /rpt_family="AluSg" FT repeat_region complement(4770312..4770503) FT /rpt_family="MIR" FT repeat_region complement(4771122..4771148) FT /rpt_family="AT_rich" FT repeat_region 4771149..4771430 FT /rpt_family="AluSx" FT repeat_region complement(4771463..4771520) FT /rpt_family="AluJ/FLAM" FT repeat_region 4771554..4771808 FT /rpt_family="AluSc" FT repeat_region 4771926..4772059 FT /rpt_family="FLAM_C" FT repeat_region 4772139..4772195 FT /rpt_family="LINE2" FT repeat_region 4772382..4772513 FT /rpt_family="LINE2" FT repeat_region 4772517..4772559 FT /rpt_family="(TGAA)n" FT repeat_region 4773480..4773546 FT /rpt_family="AluJ/FLAM" FT repeat_region complement(4773551..4773697) FT /rpt_family="AluSx" FT repeat_region complement(4773705..4773987) FT /rpt_family="AluSx" FT repeat_region 4774437..4774573 FT /rpt_family="FRAM" FT repeat_region 4774595..4774894 FT /rpt_family="AluSx" FT repeat_region 4774909..4775207 FT /rpt_family="AluY" FT repeat_region 4775297..4775444 FT /rpt_family="FLAM_A" FT repeat_region 4775448..4775743 FT /rpt_family="AluSx" FT repeat_region complement(4775744..4775993) FT /rpt_family="L1MB5" FT repeat_region complement(4776027..4776154) FT /rpt_family="MIR" FT repeat_region complement(4776230..4776528) FT /rpt_family="AluSx" FT repeat_region 4777230..4777530 FT /rpt_family="AluSq" FT repeat_region 4777545..4777847 FT /rpt_family="AluJo" FT repeat_region 4777849..4777874 FT /rpt_family="(CAAAA)n" FT repeat_region complement(4777936..4778226) FT /rpt_family="AluSx" FT repeat_region complement(4778238..4778441) FT /rpt_family="(GGAA)n" FT repeat_region complement(4778445..4778743) FT /rpt_family="AluSx" FT repeat_region 4778745..4778967 FT /rpt_family="L1" FT repeat_region 4778968..4779267 FT /rpt_family="AluY" FT repeat_region 4779332..4779553 FT /rpt_family="AluJo" FT repeat_region complement(4779669..4779968) FT /rpt_family="AluY" FT repeat_region complement(4779970..4780085) FT /rpt_family="AluJo/FLAM" FT repeat_region complement(4780128..4780412) FT /rpt_family="AluJb" FT repeat_region 4780559..4780868 FT /rpt_family="AluY" FT repeat_region 4780920..4781093 FT /rpt_family="MLT1C" FT repeat_region 4781347..4781642 FT /rpt_family="AluY" FT repeat_region 4781776..4781911 FT /rpt_family="LINE2" FT repeat_region 4782045..4782145 FT /rpt_family="L1MC/D" FT repeat_region complement(4782168..4782227) FT /rpt_family="MLT1G" FT repeat_region 4782228..4782505 FT /rpt_family="AluJb" FT repeat_region 4782579..4782637 FT /rpt_family="MLT1C" FT repeat_region complement(4782642..4782935) FT /rpt_family="AluJo" FT repeat_region 4782941..4783057 FT /rpt_family="MLT1C" FT repeat_region complement(4783084..4783381) FT /rpt_family="AluSc" FT repeat_region complement(4783387..4783686) FT /rpt_family="AluSx" FT repeat_region 4783687..4783799 FT /rpt_family="L1PB3" FT repeat_region 4783803..4784088 FT /rpt_family="AluJo" FT repeat_region 4784100..4784175 FT /rpt_family="L1PB3" FT repeat_region 4784176..4784476 FT /rpt_family="AluSx" FT repeat_region 4784477..4784509 FT /rpt_family="(GAAAA)n" FT repeat_region 4784512..4784638 FT /rpt_family="L1PB2" FT repeat_region complement(4784646..4784950) FT /rpt_family="AluY" FT repeat_region 4784974..4785066 FT /rpt_family="LINE2" FT repeat_region complement(4785131..4785160) FT /rpt_family="AT_rich" FT misc_feature 4785133..4785328 FT /note="BLASTN similarity to Z57683 (1..217); match: 0.98, FT score: 9.6e-76; database searched: nt; H.sapiens CpG DNA, FT clone 18d2, forward read cpg18d2.ft1b ." FT misc_feature 4785207..4785328 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 71.000" FT misc_feature complement(4785318..4785554) FT /note="BLASTN similarity to Z57684 (1..237); match: 0.99, FT score: 1.7e-89; database searched: nt; H.sapiens CpG DNA, FT clone 18d2, reverse read cpg18d2.rt1b ." FT misc_feature complement(4785357..4785554) FT /note="BLASTN similarity to cpg17d2.rt1a (1..199); match: FT 0.98, score: 6.1e-71; database searched: Sanger CpG; bases FT 83 to 281 (SL to QR)" FT repeat_region complement(4785687..4785710) FT /rpt_family="(TAA)n" FT repeat_region complement(4785711..4786010) FT /rpt_family="AluSp" FT repeat_region complement(4786011..4786089) FT /rpt_family="LINE2" FT repeat_region complement(4786162..4786237) FT /rpt_family="AluJ/FLAM" FT repeat_region complement(4786375..4786460) FT /rpt_family="AluSg/x" FT repeat_region 4786492..4786692 FT /rpt_family="(GGGA)n" FT repeat_region 4786698..4786798 FT /rpt_family="(GGGA)n" FT repeat_region 4786806..4786894 FT /rpt_family="MER63C" FT repeat_region 4786901..4787199 FT /rpt_family="AluSc" FT repeat_region 4787214..4787368 FT /rpt_family="MER63C" FT repeat_region complement(4787398..4787699) FT /rpt_family="AluSx" FT repeat_region complement(4787710..4787730) FT /rpt_family="AT_rich" FT repeat_region complement(4787731..4788030) FT /rpt_family="AluSx" FT repeat_region complement(4788071..4788175) FT /rpt_family="MIR" FT repeat_region 4788539..4788848 FT /rpt_family="AluSq" FT repeat_region 4788984..4789283 FT /rpt_family="AluSp" FT repeat_region 4789326..4789690 FT /rpt_family="L1ME1" FT repeat_region complement(4789697..4789989) FT /rpt_family="AluY" FT repeat_region complement(4790089..4790382) FT /rpt_family="AluJo" FT repeat_region 4790524..4790751 FT /rpt_family="L1M3" FT repeat_region 4790753..4791051 FT /rpt_family="AluSq" FT repeat_region 4791076..4791186 FT /rpt_family="(TAAA)n" FT misc_feature 4791867..4792654 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 68.000" FT misc_feature 4792842..4793876 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 93.000" FT misc_feature 4793996..4795571 FT /note="DDS similarity to overlapping ESTs:~(27410..26865) FT H17764 ym40g01.r1 Homo sapiens cDNA clone 50705 5'. Score: FT 985 Identity: 549/575 (95%).~~(27792..28253) W49527 FT zc40d12.r1 Soares senescent fibroblasts NbHSF Homo sapiens FT cDNA clone 324791 5'; Score: 870 Identity: 459/468 FT (98%).~~(28442..27863) W72702 zd71c02.s1 Soares fetal heart FT NbHH19W Homo sapiens cDNA clone 346082 3'; Score: 1079 FT Identity: 574/589 (97%).~~(28440..27966) R53537 yg84b08.s1 FT Homo sapiens cDNA clone 39953 3'. Score: 768 Identity: FT 430/465 (92%).~~(28440..28009) W49528 zc40d12.s1 Soares FT senescent fibroblasts NbHSF Homo sapiens cDNA clone 324791 FT 3'; Score: 801 Identity: 430/445 (96%).~~Additional EST FT matches:~H06279, H20710, T51584, W52518, W77942, H06325, FT Z42230, Z25084, AI076244, AI081111 and many others" FT repeat_region complement(4795715..4796007) FT /rpt_family="AluSx" FT repeat_region 4796076..4796176 FT /rpt_family="AluJo" FT repeat_region complement(4796202..4796500) FT /rpt_family="AluSg" FT repeat_region complement(4796641..4796702) FT /rpt_family="LINE2" FT repeat_region complement(4796996..4797008) FT /rpt_family="MIR" FT repeat_region complement(4797009..4797045) FT /rpt_family="LINE2" FT repeat_region complement(4797046..4797093) FT /rpt_family="MIR" FT repeat_region complement(4797176..4797468) FT /rpt_family="AluY" FT misc_feature 4797471..4797503 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 54.000" FT misc_feature 4797590..4797654 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 54.000" FT repeat_region 4797664..4797960 FT /rpt_family="AluJo" FT repeat_region 4797965..4798262 FT /rpt_family="AluY" FT repeat_region 4798340..4798643 FT /rpt_family="AluY" FT repeat_region 4799145..4799443 FT /rpt_family="AluSg" FT repeat_region 4799444..4799475 FT /rpt_family="(CAAA)n" FT repeat_region 4799637..4799936 FT /rpt_family="AluY" FT repeat_region complement(4800018..4800081) FT /rpt_family="MIR" FT misc_feature complement(4800248..4800532) FT /note="BLASTN similarity to Z25242 (2..290); match: 0.97, FT score: 3.9e-93; database searched: est; H. sapiens partial FT cDNA sequence, clone A7H04" FT repeat_region 4800552..4800629 FT /rpt_family="LINE2" FT repeat_region complement(4801195..4801249) FT /rpt_family="AT_rich" FT repeat_region 4801337..4801645 FT /rpt_family="AluJo" FT repeat_region complement(4801676..4801968) FT /rpt_family="AluY" FT repeat_region complement(4801997..4802109) FT /rpt_family="L1MB6" FT repeat_region 4802190..4802316 FT /rpt_family="FLAM_A" FT repeat_region 4802335..4802635 FT /rpt_family="AluSx" FT repeat_region complement(4802649..4802761) FT /rpt_family="FLAM_C" FT repeat_region 4803128..4803216 FT /rpt_family="MIR" FT repeat_region complement(4803280..4803306) FT /rpt_family="AT_rich" FT repeat_region complement(4803307..4803605) FT /rpt_family="AluY" FT repeat_region complement(4803608..4803902) FT /rpt_family="AluSx" FT repeat_region 4804177..4804275 FT /rpt_family="LINE2" FT repeat_region 4804623..4804746 FT /rpt_family="AluJb" FT repeat_region 4804751..4805047 FT /rpt_family="AluJb" FT repeat_region 4805051..4805348 FT /rpt_family="AluJb" FT repeat_region complement(4805349..4805379) FT /rpt_family="AT_rich" FT repeat_region 4805394..4805693 FT /rpt_family="AluSq" FT misc_feature 4805796..4805876 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 66.000" FT repeat_region complement(4805896..4805941) FT /rpt_family="AT_rich" FT repeat_region complement(4805942..4806117) FT /rpt_family="AluSg/x" FT repeat_region complement(4806132..4806291) FT /rpt_family="AluSq" FT repeat_region complement(4806358..4806508) FT /rpt_family="FRAM" FT repeat_region complement(4806512..4806679) FT /rpt_family="LINE2" FT repeat_region complement(4806676..4806764) FT /rpt_family="LINE2" FT repeat_region complement(4806787..4806969) FT /rpt_family="AluSg/x" FT repeat_region complement(4806970..4807270) FT /rpt_family="AluSx" FT repeat_region 4807637..4807926 FT /rpt_family="AluJo" FT repeat_region 4807929..4808011 FT /rpt_family="L1ME1" FT repeat_region complement(4808013..4808313) FT /rpt_family="AluY" FT repeat_region 4808317..4808530 FT /rpt_family="L1MB6" FT repeat_region 4808538..4808599 FT /rpt_family="Alu" FT repeat_region complement(4969277..4969566) FT /rpt_family="GC_rich" FT misc_feature complement(join(4969823..4969854,4970786..4971143)) FT /note="BLASTN similarity to AA992428 ot53h05.s1 FT Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1620537 3' FT (402..371,370..13); match 0.98-1.00; database searched: FT est" FT repeat_region 4972290..4972378 FT /rpt_family="MIR" FT repeat_region complement(4972465..4972627) FT /rpt_family="MER20" FT misc_feature complement(4972801..4972858) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 99.000" FT misc_feature complement(4973126..4973186) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 73.000" FT repeat_region complement(4973201..4973499) FT /rpt_family="AluSx" FT repeat_region 4973755..4973840 FT /rpt_family="L1MC1" FT repeat_region 4973859..4974125 FT /rpt_family="AluSx" FT repeat_region 4974128..4974432 FT /rpt_family="AluY" FT repeat_region 4974468..4974766 FT /rpt_family="AluSx" FT repeat_region 4974815..4975045 FT /rpt_family="LINE2" FT repeat_region 4975166..4975478 FT /rpt_family="MER58B" FT repeat_region complement(4975605..4975903) FT /rpt_family="AluSx" FT repeat_region 4975979..4976278 FT /rpt_family="AluSq" FT misc_feature 4976315..4976391 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 87.000" FT repeat_region complement(4977019..4977131) FT /rpt_family="(GAAA)n" FT misc_feature 4977209..4977364 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 68.000" FT misc_feature 4977618..4977989 FT /note="BLASTN similarity to D44766 HUMSUPY197 Human brain FT cDNA Homo sapiens cDNA clone MF15-S (1..372); match 0.98; FT database searched: est" FT repeat_region 4978236..4978537 FT /rpt_family="AluSx" FT repeat_region 4979035..4979310 FT /rpt_family="AluJo" FT repeat_region complement(4979769..4979831) FT /rpt_family="L1MB7" FT repeat_region 4979832..4980133 FT /rpt_family="AluSx" FT repeat_region complement(4980134..4980427) FT /rpt_family="L1MB8" FT repeat_region complement(4980433..4980738) FT /rpt_family="AluSx" FT repeat_region complement(4980740..4980841) FT /rpt_family="L1M4" FT repeat_region 4982021..4982316 FT /rpt_family="AluSx" FT repeat_region 4982317..4982482 FT /rpt_family="AluSg/x" FT repeat_region complement(4982529..4982574) FT /rpt_family="AT_rich" FT repeat_region complement(4982623..4982921) FT /rpt_family="AluSg" FT repeat_region complement(4982945..4983140) FT /rpt_family="MER33" FT repeat_region 4984084..4984202 FT /rpt_family="MER20" FT repeat_region 4985052..4985347 FT /rpt_family="AluSx" FT repeat_region complement(4986654..4986887) FT /rpt_family="LINE2" FT repeat_region complement(4986968..4987226) FT /rpt_family="AluSx" FT repeat_region complement(4987227..4987687) FT /rpt_family="LTR19A" FT repeat_region complement(4987688..4987735) FT /rpt_family="AluJ/FLAM" FT repeat_region complement(4987760..4987940) FT /rpt_family="LINE2" FT repeat_region complement(4988286..4988585) FT /rpt_family="AluY" FT repeat_region 4988592..4988998 FT /rpt_family="MER21B" FT misc_feature complement(4988987..4989098) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 64.000" FT repeat_region complement(4989302..4989346) FT /rpt_family="(GAAA)n" FT repeat_region complement(4989347..4989651) FT /rpt_family="AluSx" FT repeat_region complement(4989662..4989962) FT /rpt_family="AluSx" FT repeat_region 4990015..4990300 FT /rpt_family="AluJb" FT repeat_region complement(4990819..4990848) FT /rpt_family="AT_rich" FT repeat_region 4990850..4991148 FT /rpt_family="AluSx" FT repeat_region 4991343..4991476 FT /rpt_family="AluJb" FT repeat_region complement(4991481..4991942) FT /rpt_family="L1MD2" FT repeat_region 4992055..4992176 FT /rpt_family="L1ME1" FT repeat_region complement(4992215..4992460) FT /rpt_family="L1" FT repeat_region complement(4992462..4992761) FT /rpt_family="AluJb" FT repeat_region complement(4992762..4993054) FT /rpt_family="L1" FT repeat_region 4993140..4993439 FT /rpt_family="AluSx" FT repeat_region complement(4993440..4993612) FT /rpt_family="L1" FT repeat_region complement(4993620..4993910) FT /rpt_family="AluJb" FT repeat_region complement(4993930..4994048) FT /rpt_family="L1M4" FT repeat_region complement(4994093..4994256) FT /rpt_family="AluJb" FT repeat_region 4994301..4994596 FT /rpt_family="AluSp" FT repeat_region complement(4994630..4994903) FT /rpt_family="L1M4" FT repeat_region complement(4995379..4995589) FT /rpt_family="AluSq" FT repeat_region complement(4996000..4996295) FT /rpt_family="AluSx" FT repeat_region complement(4996386..4996602) FT /rpt_family="AluJo" FT repeat_region complement(4996831..4997010) FT /rpt_family="MER20" FT repeat_region complement(4997058..4997177) FT /rpt_family="MER20" FT repeat_region 4997539..4997651 FT /rpt_family="MIR" FT repeat_region complement(4998367..4998686) FT /rpt_family="L1MC4" FT misc_feature 5019768..5019880 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 77.000" FT repeat_region complement(5020139..5020271) FT /rpt_family="(CAA)n" FT repeat_region complement(5020357..5020526) FT /rpt_family="L1M4" FT repeat_region 5020876..5021172 FT /rpt_family="AluSx" FT repeat_region 5021318..5021601 FT /rpt_family="AluJo" FT repeat_region complement(5021648..5021944) FT /rpt_family="AluSc" FT repeat_region 5022957..5023230 FT /rpt_family="MLT1D" FT repeat_region complement(5023775..5024061) FT /rpt_family="AluJo" FT repeat_region 5024680..5024977 FT /rpt_family="AluSq" FT repeat_region complement(5024979..5025064) FT /rpt_family="L1MB8" FT repeat_region 5025215..5025290 FT /rpt_family="AluJ/FLAM" FT repeat_region 5025513..5025650 FT /rpt_family="LINE2" FT repeat_region complement(5025847..5025889) FT /rpt_family="(TAAA)n" FT repeat_region complement(5025893..5026117) FT /rpt_family="AluSq" FT repeat_region 5026142..5026215 FT /rpt_family="AluJ/FLAM" FT repeat_region complement(5026344..5026492) FT /rpt_family="FRAM" FT repeat_region complement(5027502..5027551) FT /rpt_family="(GAAA)n" FT repeat_region complement(5027556..5027851) FT /rpt_family="AluSq" FT repeat_region complement(5027875..5027983) FT /rpt_family="L1MB8" FT repeat_region complement(5027984..5028281) FT /rpt_family="AluJo" FT repeat_region complement(5028343..5028912) FT /rpt_family="L1MB8" FT repeat_region complement(5028915..5029217) FT /rpt_family="AluJb" FT repeat_region 5029556..5029846 FT /rpt_family="AluJb" FT misc_feature 5030033..5030092 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(5030122..5030281) FT /rpt_family="AluJb" FT misc_feature 5030998..5031151 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 50.000" FT misc_feature 5032877..5033142 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 86.000" FT CDS join(5032902..5033042,5039847..5040022,5041148..>5041304) FT /codon_start=1 FT /product="F16601_1, partial CDS" FT /note="Hypothetical human protein most similar to KIAA0677 FT protein encoded by AB014577 [Homo sapiens]; Hypothetical FT protein shares 77% residue identity with KIAA0677 protein" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC33799.1" FT /translation="MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGL FT AKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANS FT EKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGSLYDDVSMRLRGRTGTSFL" FT repeat_region complement(5033193..5033311) FT /rpt_family="LINE2" FT repeat_region 5033444..5033595 FT /rpt_family="FRAM" FT repeat_region 5033862..5034159 FT /rpt_family="AluJb" FT repeat_region 5034410..5034638 FT /rpt_family="MER58B" FT repeat_region complement(5034835..5035006) FT /rpt_family="AluJb" FT repeat_region complement(5035857..5035914) FT /rpt_family="(CA)n" FT repeat_region complement(5037638..5037844) FT /rpt_family="MER20" FT repeat_region complement(5037845..5037883) FT /rpt_family="(CAG)n" FT repeat_region 5038717..5038750 FT /rpt_family="MIR" FT repeat_region 5039177..5039481 FT /rpt_family="AluJo" FT misc_feature 5039847..5040022 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(5040026..5040067) FT /rpt_family="GC_rich" FT misc_feature 5041148..5041304 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 96.000" FT repeat_region 5042102..5042156 FT /rpt_family="MER46" FT repeat_region complement(5042190..5042230) FT /rpt_family="MSTA" FT repeat_region 5042231..5042528 FT /rpt_family="AluSq" FT repeat_region complement(5042532..5042863) FT /rpt_family="MSTA" FT repeat_region complement(5044460..5044551) FT /rpt_family="L1M4" FT repeat_region complement(5044561..5044701) FT /rpt_family="AluSg/x" FT repeat_region complement(5044702..5045393) FT /rpt_family="L1MC1" FT repeat_region complement(5045398..5045582) FT /rpt_family="AluYa5" FT repeat_region complement(5045617..5045784) FT /rpt_family="AluSc" FT repeat_region complement(5045785..5045862) FT /rpt_family="AluSq/x" FT repeat_region complement(5187248..5187520) FT /rpt_family="Alu" FT repeat_region complement(5186944..5187230) FT /rpt_family="Alu" FT repeat_region complement(5185821..5186222) FT /rpt_family="Alu" FT repeat_region complement(5185379..5185786) FT /rpt_family="Alu" FT repeat_region complement(5184899..5185190) FT /rpt_family="Alu" FT repeat_region 5184099..5184394 FT /rpt_family="Alu" FT repeat_region 5183689..5183963 FT /rpt_family="Alu" FT repeat_region 5183134..5183416 FT /rpt_family="Alu" FT repeat_region 5182083..5182365 FT /rpt_family="Alu" FT repeat_region complement(5181377..5181893) FT /rpt_family="Alu" FT repeat_region 5181046..5181344 FT /rpt_family="Alu" FT repeat_region complement(5180723..5180978) FT /rpt_family="Alu" FT repeat_region 5180280..5180566 FT /rpt_family="Alu" FT repeat_region complement(5179952..5180234) FT /rpt_family="Alu" FT repeat_region complement(5178873..5179007) FT /rpt_family="Alu" FT repeat_region 5178355..5178641 FT /rpt_family="Alu" FT repeat_region 5176434..5177374 FT /rpt_family="Alu" FT repeat_region complement(5175856..5176153) FT /rpt_family="Alu" FT repeat_region complement(5174947..5175537) FT /rpt_family="Alu" FT repeat_region complement(5174435..5174732) FT /rpt_family="Alu" FT repeat_region 5173507..5174095 FT /rpt_family="Alu" FT repeat_region 5172252..5173108 FT /rpt_family="Alu" FT repeat_region 5171941..5172229 FT /rpt_family="Alu" FT repeat_region complement(5171215..5171482) FT /rpt_family="Alu" FT repeat_region 5170778..5171036 FT /rpt_family="Alu" FT repeat_region 5169274..5169521 FT /rpt_family="MER42" FT repeat_region 5168966..5169239 FT /rpt_family="Alu" FT repeat_region complement(5168781..5168909) FT /rpt_family="Alu" FT repeat_region 5168687..5168732 FT /rpt_family="MER42" FT repeat_region 5168505..5168611 FT /rpt_family="Alu" FT repeat_region 5168075..5168363 FT /rpt_family="Alu" FT repeat_region 5167261..5167545 FT /rpt_family="Alu" FT repeat_region 5166939..5167232 FT /rpt_family="Alu" FT repeat_region 5166379..5166550 FT /rpt_family="L1" FT repeat_region 5166020..5166269 FT /rpt_family="Alu" FT repeat_region complement(5165432..5165759) FT /rpt_family="LTR12" FT repeat_region complement(5158483..5158835) FT /rpt_family="LTR12" FT repeat_region 5158173..5158453 FT /rpt_family="Alu" FT repeat_region complement(5157374..5157735) FT /rpt_family="MLT1" FT repeat_region 5156893..5157185 FT /rpt_family="Alu" FT repeat_region 5152840..5153071 FT /rpt_family="Alu" FT mRNA join(5082429..5082515,5110633..5110829,5119664..5119863, FT 5131087..5131556,5131898..5132018,5133894..5134072, FT 5135350..5135572,5137273..5137349,5137632..5137687, FT 5137973..5138081,5143978..5144163,5144259..5144423, FT 5144794..5144913,5150369..5150461,5151346..5153057) FT /product="Homo sapiens mRNA for KIAA0876 protein" FT /note="partial cds" FT CDS join(<5082429..5082515,5110633..5110829,5119664..5119863, FT 5131087..5131556,5131898..5132018,5133894..5134072, FT 5135350..5135572,5137273..5137349,5137632..5137687, FT 5137973..5138081,5143978..5144163,5144259..5144423, FT 5144794..5144913,5150369..5150461,5151346..5151522) FT /codon_start=1 FT /product="KIAA0876 protein" FT /note="partial sequence" FT /protein_id="AAF31271.1" FT /translation="AGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDVFV FT RILQPERYELWKQGKDLTVLDHTRPTALTSPELSSWSASRASLKAKLLRRSHRKRSQPK FT KPKPEDPKFPGEGTAGAALLEEAGGSVKEEAGPEVDPEEEEEEPQPLPHGREAEGAEED FT GRGKLRPTKAKSERKKKSFGLLPPQLPPPPAHFPSEEALWLPSPLEPPVLGPGPAAMEE FT SPLPAPLNVVPPEVPSEELEAKPRPIIPMLYVVPRPGKAAFNQEHVSCQQAFEHFAQKG FT PTWKEPVSPMELTGPEDGAASSGAGRMETKARAGEGQAPSTFSKLKMEIKKSRRHPLGR FT PPTRSPLSVVKQEASSDEEASPFSGEEDVSDPDALRPLLSLQWKNRAASFQAERKFNAA FT AARTEPYCAICTLFYPYCQALQTEKEAPIASLGKGCPATLPSKSRQKTRPLIPEMCFTS FT GGENTEPLPANSYIGDDGTSPLIACGKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWT FT AECCLCNLRGGALQMTTDRRWIHVICAIAVPEARFLNVIERHPVDISAIPEQRWKLKCV FT YCRKRMKKVSGACIQCSYEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCLKHKSGGHA FT VQLLRAVSLGQVVITKNRNGLYYRCRVIGAASQTCYEVNFDDGSYSDNLYPESITSRDC FT VQLGPPSEGELVELRWTDGNLYKAKFISSVTSHIYQVEFEDGSQLTVKRGDIFTLEEEL FT PKRVRSRLSLSTGAPQEPAFSGEEAKAAKRPRVGTPLATEDSGRSQDYVAFVESLLQVQ FT GRPGAPF" FT repeat_region complement(5149356..5149471) FT /rpt_family="Alu" FT repeat_region 5147480..5147771 FT /rpt_family="Alu" FT repeat_region 5146660..5146969 FT /rpt_family="Alu" FT repeat_region 5145319..5145604 FT /rpt_family="Alu" FT repeat_region 5143067..5143347 FT /rpt_family="Alu" FT repeat_region 5140475..5140756 FT /rpt_family="Alu" FT repeat_region complement(5138974..5139215) FT /rpt_family="Alu" FT repeat_region 5138468..5138675 FT /rpt_family="Alu" FT repeat_region complement(5124915..5125187) FT /rpt_family="Alu" FT repeat_region complement(5124638..5124895) FT /rpt_family="Alu" FT repeat_region complement(5122065..5122325) FT /rpt_family="MLT1" FT repeat_region 5120097..5120316 FT /rpt_family="Alu" FT repeat_region 5116157..5116277 FT /rpt_family="Alu" FT repeat_region complement(5113691..5113743) FT /rpt_family="MER20" FT repeat_region 5112004..5112250 FT /rpt_family="Alu" FT repeat_region 5110221..5110468 FT /rpt_family="Alu" FT repeat_region complement(5105452..5105738) FT /rpt_family="Alu" FT repeat_region 5101408..5101557 FT /rpt_family="Alu" FT repeat_region 5100959..5101251 FT /rpt_family="Alu" FT repeat_region complement(5100475..5100715) FT /rpt_family="Alu" FT repeat_region complement(5097282..5097558) FT /rpt_family="Alu" FT repeat_region complement(5096098..5096390) FT /rpt_family="Alu" FT unsure complement(5090731..5090870) FT /note="Single clone coverage, two chemistries" FT repeat_region complement(5084894..5085006) FT /rpt_family="Alu" FT repeat_region 5084689..5084836 FT /rpt_family="Alu" FT repeat_region 5084258..5084404 FT /rpt_family="HSATI" FT repeat_region 5083984..5084265 FT /rpt_family="Alu" FT repeat_region complement(5079747..5079876) FT /rpt_family="Alu" FT repeat_region complement(5075483..5075619) FT /rpt_family="Alu" FT repeat_region 5073872..5074104 FT /rpt_family="Alu" FT repeat_region complement(5072678..5073170) FT /rpt_family="MLT1" FT repeat_region complement(5069323..5069912) FT /rpt_family="Alu" FT repeat_region complement(5062791..5062928) FT /rpt_family="Alu" FT repeat_region 5061601..5061784 FT /rpt_family="Alu" FT repeat_region 5060169..5060461 FT /rpt_family="Alu" FT repeat_region complement(5056417..5056719) FT /rpt_family="Alu" FT repeat_region complement(5054127..5054378) FT /rpt_family="Alu" FT repeat_region 5050635..5050925 FT /rpt_family="Alu" FT mRNA complement(join(<5207933..5208068,5208248..5208402, FT 5210480..5210605,5210690..5210816,5211601..5211779, FT 5211976..5212261,5212348..5212502,5214372..5214491, FT 5214572..5214747,5215300..5215423,5215509..5215606, FT 5216731..5216778,5218431..5218543,5219321..5219478, FT 5219950..5220165,5220271..5220364,5221011..5221264, FT 5222134..5222231,5222700..5223308,5225738..5225855, FT 5229327..5229353,5229502..5229695,5231321..5231626, FT 5238930..5239074,5240210..>5240344)) FT /product="Human protein tyrosine phosphatase sigma mRNA" FT CDS complement(join(<5207933..5208068,5208248..5208402, FT 5210480..5210605,5210690..5210816,5211601..5211779, FT 5211976..5212261,5212348..5212502,5214372..5214491, FT 5214572..5214747,5215300..5215423,5215509..5215606, FT 5216731..5216778,5218431..5218543,5219321..5219478, FT 5219950..5220165,5220271..5220364,5221011..5221264, FT 5222134..5222231,5222700..5223308,5225738..5225855, FT 5229327..5229353,5229502..5229695,5231321..5231626, FT 5238930..5239074,5240210..>5240344)) FT /codon_start=1 FT /product="PTPsigma [AA 524-1926]" FT /note="protein tyrosine phosphatase sigma" FT /protein_id="AAC62834.1" FT /translation="VPGQPMNLRAEARSETSITLSWSPPRQESIIKYELLFREGDHGRE FT VGRTFDPTTSYVVEDLKPNTEYAFRLAARSPQGLGAFTPVVRQRTLQSKPSAPPQDVKC FT VSVRSTAILVSWRPPPPETHNGALVGYSVRYRPLGSEDPEPKEVNGIPPTTTQILLEAL FT EKWTQYRITTVAHTEVGPGPESSPVVVRTDEDVPSAPPRKVEAEALNATAIRVLWRSPA FT PGRQHGQIRGYQVHYVRMEGAEARGPPRIKDVMLADAQWETDDTAEYEMVITNLQPETA FT YSITVAAYTMKGDGARSKPKVVVTKGAVLGRPTLSVQQTPEGSLLARWEPPAGTAEDQV FT LGYRLQFGREDSTPLATLEFPPSEDRYTASGVHKGATYVFRLAARSRGGLGEEAAEVLS FT IPEDTPRGHPQILEAAGNASAGTVLLRWLPPVPAERNGAIVKYTVAVREAGALGPARET FT ELPAAAEPGAENALTLQGLKPDTAYDLQVRAHTRRGPGPFSPPVRYRTFLRDQVSPKNF FT KVKMIMKTSVLLSWEFPDNYNSPTPYKIQYNGLTLDVDGRTTKKLITHLKPHTFYNFVL FT TNRGSSLGGLQQTVTAWTAFNLLNGKPSVAPKPDADGFIMVYLPDGQSPVPVQSYFIVM FT VPLRKSRGGQFLTPLGSPEDMDLEELIQDISRLQRRSLRHSRQLEVPRPYIAARFSVLP FT PTFHPGDQKQYGGFDNRGLEPGHRYVLFVLAVLQKSEPTFAASPFSDPFQLDNPDPQPI FT VDGEEGLIWVIGPVLAVVFIICIVIAILLYKNKRKDSEPRTKCLLNNADLAPHHPKDPV FT EMRRINFQTPDSGLRSPLREPGFHFESMLSHPPIPIADMAEHTERLKANDSLKLSQEYE FT SIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILQPIEGIMGSDYINANYVDGYRC FT QNAYIATQGPLPETFGDFWRMVWEQRSATIVMMTRLEEKSRIKCDQYWPNRGTETYGFI FT QVTLLDTIELATFCVRTFSLHKNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFLRRVK FT TCNPPDAGPIVVHCSAGVGRTGCFIVIDAMLERIKPEKTVDVYGHVTLMRSQRNYMVQT FT EDQYSFIHEALLEAVGCGNTEVPARSLYAYIQKLAQVEPGEHVTGMELEFKRLANSKAH FT TSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIA FT TQGPLAETTEDFWRMLWENNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMA FT EYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQF FT GQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTE" FT repeat_region complement(5220857..5220954) FT /rpt_family="MIR" FT repeat_region 5222452..5222511 FT /rpt_family="(GGA)n" FT repeat_region complement(5223409..5223560) FT /rpt_family="FRAM" FT repeat_region complement(5223572..5223872) FT /rpt_family="AluSx" FT repeat_region 5223904..5224199 FT /rpt_family="AluSx" FT repeat_region complement(5224228..5224362) FT /rpt_family="LINE2" FT repeat_region 5226056..5226340 FT /rpt_family="LINE2" FT repeat_region complement(5226345..5226446) FT /rpt_family="MER63B" FT repeat_region 5226460..5226774 FT /rpt_family="AluSx" FT repeat_region complement(5226776..5227052) FT /rpt_family="MER63B" FT repeat_region complement(5227057..5227360) FT /rpt_family="AluJo" FT repeat_region complement(5227425..5227720) FT /rpt_family="AluSp" FT repeat_region 5227803..5227856 FT /rpt_family="LINE2" FT repeat_region 5228206..5228374 FT /rpt_family="AluSg/x" FT repeat_region complement(5228375..5228654) FT /rpt_family="AluSx" FT repeat_region complement(5228737..5228772) FT /rpt_family="MIR" FT repeat_region 5229363..5229442 FT /rpt_family="(GGA)n" FT repeat_region complement(5229448..5229499) FT /rpt_family="GC_rich" FT repeat_region complement(5229532..5229559) FT /rpt_family="GC_rich" FT repeat_region complement(5229676..5229763) FT /rpt_family="GC_rich" FT repeat_region complement(5229977..5230124) FT /rpt_family="MIR" FT repeat_region complement(5230320..5230472) FT /rpt_family="FRAM" FT repeat_region complement(5230480..5230771) FT /rpt_family="AluJo" FT repeat_region complement(5230883..5230994) FT /rpt_family="MER63A" FT repeat_region complement(5231266..5231310) FT /rpt_family="GC_rich" FT repeat_region 5231695..5231765 FT /rpt_family="(CAAAA)n" FT repeat_region 5231802..5231852 FT /rpt_family="(CGGG)n" FT repeat_region complement(5232027..5232070) FT /rpt_family="MIR" FT repeat_region complement(5232087..5232118) FT /rpt_family="LINE2" FT repeat_region complement(5232088..5232126) FT /rpt_family="MIR" FT repeat_region complement(5232193..5232250) FT /rpt_family="MIR" FT repeat_region complement(5232210..5232262) FT /rpt_family="LINE2" FT repeat_region complement(5232260..5232311) FT /rpt_family="MIR" FT repeat_region complement(5232332..5232372) FT /rpt_family="MIR" FT repeat_region complement(5232451..5232503) FT /rpt_family="LINE2" FT repeat_region complement(5232501..5232552) FT /rpt_family="MIR" FT repeat_region complement(5232630..5232670) FT /rpt_family="MIR" FT repeat_region complement(5232692..5232727) FT /rpt_family="MIR" FT repeat_region complement(5232824..5232857) FT /rpt_family="MIR" FT repeat_region complement(5232943..5232999) FT /rpt_family="LINE2" FT repeat_region complement(5233003) FT /rpt_family="MIR" FT repeat_region complement(5233004..5233034) FT /rpt_family="LINE2" FT repeat_region complement(5233035..5233043) FT /rpt_family="MIR" FT repeat_region complement(5233128..5233165) FT /rpt_family="LINE2" FT repeat_region complement(5233308..5233347) FT /rpt_family="MIR" FT repeat_region complement(5233425..5233465) FT /rpt_family="MIR" FT repeat_region 5233673..5233976 FT /rpt_family="AluSg" FT repeat_region complement(5234591..5234603) FT /rpt_family="MIR" FT repeat_region complement(5234604..5234647) FT /rpt_family="LINE2" FT repeat_region complement(5234648..5234649) FT /rpt_family="MIR" FT repeat_region complement(5234676..5234717) FT /rpt_family="LINE2" FT repeat_region complement(5234730..5234787) FT /rpt_family="MIR" FT repeat_region complement(5234798..5234853) FT /rpt_family="MIR" FT repeat_region complement(5234874..5234923) FT /rpt_family="MIR" FT repeat_region complement(5234952..5235250) FT /rpt_family="AluY" FT repeat_region complement(5235251..5235260) FT /rpt_family="MIR" FT repeat_region complement(5235261..5235304) FT /rpt_family="LINE2" FT repeat_region complement(5235305..5235307) FT /rpt_family="MIR" FT repeat_region complement(5235371..5235438) FT /rpt_family="MIR" FT repeat_region complement(5235551..5235611) FT /rpt_family="MIR" FT repeat_region complement(5235688..5235737) FT /rpt_family="MIR" FT repeat_region complement(5235767..5235814) FT /rpt_family="MIR" FT repeat_region complement(5235890..5235954) FT /rpt_family="MIR" FT repeat_region complement(5236037..5236097) FT /rpt_family="MIR" FT repeat_region complement(5236278..5236376) FT /rpt_family="MIR" FT repeat_region 5239112..5239256 FT /rpt_family="(GA)n" FT repeat_region 5239278..5239400 FT /rpt_family="(CAGA)n" FT repeat_region 5239382..5239508 FT /rpt_family="(CAGA)n" FT repeat_region 5239514..5239632 FT /rpt_family="(GA)n" FT repeat_region 5239648..5239767 FT /rpt_family="(GA)n" FT repeat_region 5239753..5239873 FT /rpt_family="(CAGA)n" FT repeat_region 5239980..5240097 FT /rpt_family="(GA)n" FT repeat_region 5240569..5240869 FT /rpt_family="AluY" FT repeat_region 5240870..5240892 FT /rpt_family="AT_rich" FT repeat_region complement(5240901..5241199) FT /rpt_family="AluSx" FT repeat_region complement(5241293..5241593) FT /rpt_family="AluJo" FT repeat_region complement(5241849..5242144) FT /rpt_family="AluSq" FT repeat_region complement(5242394..5242689) FT /rpt_family="AluSx" FT repeat_region complement(5242711..5242985) FT /rpt_family="AluJo" FT repeat_region complement(5243006..5243128) FT /rpt_family="FLAM_A" FT repeat_region complement(5243139..5243446) FT /rpt_family="AluSq" FT repeat_region complement(5243491..5243557) FT /rpt_family="AluS" FT gene complement(<5238931..>5265208) FT /gene="PTPRS" FT /note="protein tyrosine phosphatase, receptor type, sigma" FT CDS complement(join(<5238935..5239074,5240210..5240343, FT 5243912..5244493,5245787..5246056,5258028..5258138, FT 5265019..>5265208)) FT /codon_start=1 FT /gene="PTPRS" FT /product="PTPsigma, partial CDS" FT /note="protein tyrosine phosphatase sigma [Homo sapiens]" FT /protein_id="AAC27825.1" FT /translation="EDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKD FT FLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVRRV FT APRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTD FT VKDSANYTCVAMSSLGVIEAVAQITVKSLPKAPGTPMVTENTATSITITWDSGNPDPVS FT YYVIEYKSKSQDGPYQIKEDITTTRYSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTR FT TGEQAPASAPRNVQARMLSATTMIVQWEEPVEPNGLIRGYRVYYTMEPEHPVGNWQKHN FT VDDSLLTTVGSLLEDETYTVRVLAFTSVGDGPLSDPIQVKTQQGVPGQPMNLRAEARSE FT TSITLSWSPPRQESIIKYELLFREGDHGREVGRTFDPTTSYVVEDLKPNTEYAFRLAAR FT SPQGLGAFTPVVRQRTL" FT repeat_region complement(5243491..5243782) FT /rpt_family="AluSx" FT repeat_region complement(5244687..5244978) FT /rpt_family="AluY" FT repeat_region complement(5244989..5245300) FT /rpt_family="AluSx" FT repeat_region complement(5245303..5245603) FT /rpt_family="AluJo" FT repeat_region 5246059..5246208 FT /rpt_family="(GAAA)n" FT repeat_region 5246263..5246326 FT /rpt_family="(CAAAA)n" FT repeat_region 5246891..5246971 FT /rpt_family="(GA)n" FT repeat_region 5247014..5247103 FT /rpt_family="(GAAA)n" FT repeat_region 5247189..5247242 FT /rpt_family="(TAA)n" FT repeat_region 5248019..5248110 FT /rpt_family="POLY_G" FT repeat_region 5248284..5248412 FT /rpt_family="POLY_A" FT repeat_region 5248801..5248866 FT /rpt_family="MIR" FT repeat_region 5249043..5249341 FT /rpt_family="AluSx" FT repeat_region complement(5249396..5249547) FT /rpt_family="MIR" FT misc_feature complement(5250844..5251120) FT /gene="PTPRS" FT /note="BLASTN similarity to M85655 (1..267); match: 0.97, FT score: 8.3e-102; database searched: est; EST02172 Homo FT sapiens cDNA clone HFBCL48." FT repeat_region 5250943..5250975 FT /rpt_family="POLY_G" FT repeat_region complement(5251273..5251319) FT /rpt_family="(GGGA)n" FT repeat_region complement(5251441..5251495) FT /rpt_family="POLY_A" FT repeat_region complement(5251625..5251679) FT /rpt_family="LINE2" FT repeat_region 5252306..5252607 FT /rpt_family="AluSx" FT repeat_region 5252609..5252904 FT /rpt_family="AluSq" FT repeat_region complement(5253897..5254084) FT /rpt_family="MIR" FT repeat_region 5254532..5254620 FT /rpt_family="(GA)n" FT repeat_region 5255570..5255666 FT /rpt_family="POLY_A" FT repeat_region complement(5256003..5256060) FT /rpt_family="(CA)n" FT repeat_region complement(5256252..5256301) FT /rpt_family="AT_rich" FT repeat_region complement(5257812..5257900) FT /rpt_family="MIR" FT repeat_region complement(5259936..5260019) FT /rpt_family="MIR" FT repeat_region complement(5260189..5260490) FT /rpt_family="AluSx" FT repeat_region 5260754..5260804 FT /rpt_family="(TGAG)n" FT repeat_region complement(5261685..5261721) FT /rpt_family="MIR" FT repeat_region 5262002..5262295 FT /rpt_family="AluSx" FT repeat_region complement(5264491..5264621) FT /rpt_family="FLAM_C" FT repeat_region complement(5265355..5265650) FT /rpt_family="AluJo" FT repeat_region 5265715..5265861 FT /rpt_family="MER20" FT repeat_region 5265990..5266289 FT /rpt_family="AluSx" FT repeat_region complement(5266310..5266440) FT /rpt_family="AluJb" FT repeat_region complement(5266462..5266670) FT /rpt_family="AluSg" FT repeat_region 5266774..5266909 FT /rpt_family="LINE2" FT repeat_region 5266985..5267077 FT /rpt_family="LINE2" FT repeat_region 5267386..5267685 FT /rpt_family="AluSx" FT repeat_region 5267900..5268200 FT /rpt_family="AluY" FT repeat_region complement(5268214..5268374) FT /rpt_family="MER58A" FT repeat_region complement(5268744..5268837) FT /rpt_family="MIR" FT repeat_region 5269651..5269952 FT /rpt_family="AluSq" FT repeat_region complement(5270315..5270620) FT /rpt_family="AluJo" FT repeat_region complement(5270650..5270935) FT /rpt_family="AluSx" FT repeat_region complement(5271319..5271401) FT /rpt_family="MIR" FT repeat_region complement(5271406..5271708) FT /rpt_family="AluSg" FT repeat_region complement(5271733..5272038) FT /rpt_family="AluSq" FT repeat_region complement(5272041..5272146) FT /rpt_family="MIR" FT repeat_region 5272327..5272626 FT /rpt_family="AluSx" FT repeat_region 5272627..5272651 FT /rpt_family="POLY_A" FT repeat_region complement(5272751..5272865) FT /rpt_family="FLAM_C" FT mRNA complement(join(<5273454..5273594,5274210..5274355, FT 5286061..5286251)) FT /product="Human protein tyrosine phosphatase sigma mRNA, FT complete cds" FT CDS complement(join(<5273454..5273594,5274210..5274355, FT 5286061..5286151)) FT /codon_start=1 FT /product="PTP sigma [AA 1-126]" FT /note="protein tyrosine phosphatase sigma" FT /protein_id="AAC62832.1" FT /translation="MAPTWGPGMVSVVGPMGLLVVLLVGGCAAEEPPRFIKEPKDQIGV FT SGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENV FT YECVAQNSVGEITVHAKLTVLR" FT misc_feature complement(5274546..5274811) FT /note="BLASTN similarity to M62069 (1..266); match: 1, FT score: 2.7e-103; database searched: est; EST00126 Homo FT sapiens cDNA clone HHCH60." FT repeat_region complement(5275080..5275380) FT /rpt_family="AluY" FT repeat_region complement(5275391..5275550) FT /rpt_family="AluJb" FT repeat_region 5275551..5275834 FT /rpt_family="AluSx" FT repeat_region complement(5275848..5275926) FT /rpt_family="FLAM_A" FT repeat_region complement(5275924..5276025) FT /rpt_family="AluJo/FLAM" FT repeat_region complement(5276032..5276122) FT /rpt_family="MIR" FT repeat_region complement(5276235..5276533) FT /rpt_family="AluSx" FT repeat_region complement(5276550..5276842) FT /rpt_family="AluY" FT repeat_region complement(5277069..5277250) FT /rpt_family="AluY" FT repeat_region 5277386..5277680 FT /rpt_family="AluY" FT repeat_region complement(5278238..5278469) FT /rpt_family="AluJo" FT repeat_region complement(5278487..5278785) FT /rpt_family="AluSx" FT repeat_region 5278920..5279213 FT /rpt_family="AluSg" FT repeat_region complement(5279345..5279376) FT /rpt_family="AT_rich" FT repeat_region complement(5279382..5279680) FT /rpt_family="AluJo" FT repeat_region complement(5279693..5279993) FT /rpt_family="AluY" FT repeat_region 5280448..5280752 FT /rpt_family="AluSq" FT repeat_region complement(5280801..5281102) FT /rpt_family="AluSx" FT repeat_region 5281191..5281496 FT /rpt_family="AluSx" FT repeat_region 5282532..5282827 FT /rpt_family="AluSx" FT repeat_region complement(5282831..5282903) FT /rpt_family="MIR" FT repeat_region 5283325..5283607 FT /rpt_family="AluSx" FT repeat_region 5283802..5284028 FT /rpt_family="AluJo" FT repeat_region 5284091..5284376 FT /rpt_family="AluY" FT repeat_region 5284378..5284418 FT /rpt_family="(TAAA)n" FT repeat_region 5284419..5284493 FT /rpt_family="Alu" FT repeat_region complement(5284504..5284568) FT /rpt_family="AluJ/FRAM" FT repeat_region 5284688..5284982 FT /rpt_family="AluJb" FT repeat_region complement(5285188..5285282) FT /rpt_family="MIR" FT repeat_region 5285986..5286041 FT /rpt_family="(CA)n" FT repeat_region 5286416..5286775 FT /rpt_family="MLT1A1" FT repeat_region 5287149..5287269 FT /rpt_family="LINE2" FT repeat_region 5287951..5288094 FT /rpt_family="(CA)n" FT repeat_region 5288343..5288390 FT /rpt_family="(CA)n" FT repeat_region 5289269..5289704 FT /rpt_family="LINE2" FT repeat_region complement(5290241..5290327) FT /rpt_family="MIR" FT misc_feature complement(5291334..5291466) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 54.000" FT repeat_region 5292848..5292910 FT /rpt_family="(GGA)n" FT repeat_region complement(5293101..5293400) FT /rpt_family="GC_rich" FT repeat_region complement(5294251..5294397) FT /rpt_family="MIR" FT repeat_region 5294703..5294741 FT /rpt_family="MIR" FT repeat_region 5295541..5295657 FT /rpt_family="LINE2" FT repeat_region complement(5295763..5296053) FT /rpt_family="AluJb" FT repeat_region complement(5296088..5296254) FT /rpt_family="LINE2" FT repeat_region 5296274..5296531 FT /rpt_family="AluJo" FT repeat_region complement(5296552..5296926) FT /rpt_family="LINE2" FT repeat_region complement(5296966..5297080) FT /rpt_family="LINE2" FT repeat_region complement(5297404..5297769) FT /rpt_family="LINE2" FT repeat_region complement(5297803..5298104) FT /rpt_family="AluSg" FT repeat_region 5298828..5299532 FT /rpt_family="LINE2" FT repeat_region 5299601..5299899 FT /rpt_family="AluSq" FT repeat_region complement(5299921..5299969) FT /rpt_family="MER3" FT repeat_region 5299970..5300270 FT /rpt_family="AluSx" FT repeat_region complement(5300279..5300408) FT /rpt_family="MER3" FT repeat_region 5300500..5300798 FT /rpt_family="AluSx" FT repeat_region complement(5300821..5300859) FT /rpt_family="AT_rich" FT repeat_region complement(5301329..5301625) FT /rpt_family="AluSx" FT repeat_region complement(5301812..5302092) FT /rpt_family="AluSx" FT repeat_region 5302131..5302385 FT /rpt_family="AluJo" FT repeat_region 5302787..5303100 FT /rpt_family="AluY" FT repeat_region 5303169..5303224 FT /rpt_family="MIR" FT repeat_region complement(5303410..5303506) FT /rpt_family="LINE2" FT repeat_region 5303686..5303979 FT /rpt_family="AluSx" FT repeat_region complement(5304078..5304142) FT /rpt_family="LINE2" FT repeat_region 5304195..5304502 FT /rpt_family="AluSg" FT repeat_region 5304503..5304679 FT /rpt_family="AluSg/x" FT repeat_region complement(5304793..5304846) FT /rpt_family="LINE2" FT repeat_region 5305276..5305578 FT /rpt_family="AluJo" FT repeat_region 5305594..5305758 FT /rpt_family="FRAM" FT repeat_region complement(5305759..5305789) FT /rpt_family="AT_rich" FT repeat_region 5305800..5305970 FT /rpt_family="AluY" FT repeat_region complement(5306160..5306455) FT /rpt_family="AluSx" FT repeat_region 5307034..5307338 FT /rpt_family="AluSq" FT repeat_region complement(5307630..5307825) FT /rpt_family="MER3" FT repeat_region complement(5307834..5307965) FT /rpt_family="MER58A" FT repeat_region complement(5307834..5308028) FT /rpt_family="MER58A" FT repeat_region 5308392..5308480 FT /rpt_family="LINE2" FT repeat_region 5309227..5309297 FT /rpt_family="MIR" FT repeat_region 5309621..5310314 FT /rpt_family="LINE2" FT repeat_region complement(5310327..5310628) FT /rpt_family="AluSx" FT repeat_region complement(5310716..5310894) FT /rpt_family="AluJo" FT repeat_region complement(5310895..5311188) FT /rpt_family="AluSc" FT repeat_region complement(5311189..5311319) FT /rpt_family="AluSq/x" FT repeat_region 5311322..5311453 FT /rpt_family="LINE2" FT repeat_region 5311770..5312072 FT /rpt_family="AluY" FT repeat_region 5312390..5312691 FT /rpt_family="AluJo" FT repeat_region complement(5312714..5312921) FT /rpt_family="MIR" FT repeat_region complement(5312930..5313227) FT /rpt_family="AluSx" FT repeat_region 5313825..5313958 FT /rpt_family="AluJo" FT repeat_region 5313986..5314148 FT /rpt_family="AluJo" FT repeat_region 5314177..5314253 FT /rpt_family="MIR" FT repeat_region 5314308..5314404 FT /rpt_family="MIR" FT repeat_region complement(5314546..5314570) FT /rpt_family="AT_rich" FT repeat_region complement(5314573..5314700) FT /rpt_family="FLAM_C" FT repeat_region 5315075..5315200 FT /rpt_family="LINE2" FT repeat_region complement(5315373..5315674) FT /rpt_family="AluJo" FT repeat_region complement(5315678..5315711) FT /rpt_family="Alu" FT repeat_region complement(5315720..5315929) FT /rpt_family="AluJo" FT repeat_region complement(5315971..5316220) FT /rpt_family="AluJo" FT repeat_region complement(5316403..5316703) FT /rpt_family="AluSx" FT repeat_region complement(5316704..5316838) FT /rpt_family="AluSq/x" FT repeat_region 5317128..5317186 FT /rpt_family="LINE2" FT repeat_region 5317201..5317499 FT /rpt_family="AluSx" FT repeat_region complement(5317508..5317591) FT /rpt_family="MIR" FT repeat_region 5317769..5317900 FT /rpt_family="AluSx" FT repeat_region 5317901..5318201 FT /rpt_family="AluY" FT repeat_region 5318202..5318368 FT /rpt_family="AluSx" FT repeat_region 5318474..5318584 FT /rpt_family="MIR" FT repeat_region complement(5318660..5318840) FT /rpt_family="AluJo" FT repeat_region 5319141..5319425 FT /rpt_family="AluSx" FT repeat_region complement(5319426..5319449) FT /rpt_family="AT_rich" FT misc_feature 5319451..5319536 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 75.000" FT repeat_region 5319531..5319956 FT /rpt_family="LINE2" FT repeat_region complement(5320443..5320736) FT /rpt_family="AluSx" FT repeat_region complement(5320772..5320924) FT /rpt_family="MIR" FT repeat_region 5320993..5321303 FT /rpt_family="AluJo" FT repeat_region complement(5321414..5321492) FT /rpt_family="MIR" FT repeat_region complement(5321644..5321691) FT /rpt_family="MIR" FT repeat_region complement(5321700..5321738) FT /rpt_family="MIR" FT repeat_region complement(5321764..5321821) FT /rpt_family="MIR" FT repeat_region complement(5321830..5321888) FT /rpt_family="MIR" FT repeat_region complement(5321959..5322012) FT /rpt_family="MIR" FT repeat_region complement(5322021..5322119) FT /rpt_family="MIR" FT misc_feature 5322333..5322425 FT /note="BLASTN similarity to cpg203d2.ft1a (1..93); match: FT 1, score: 9.0e-32; database searched: Sanger CpG; bases 99 FT to 191 (SL to SR)" FT misc_feature complement(5322334..5322426) FT /note="BLASTN similarity to cpg203d1.rt1a (1..93); match: FT 1, score: 9.0e-32; database searched: Sanger CpG; bases 73 FT to 165 (SL to SR)" FT repeat_region 5322610..5322910 FT /rpt_family="AluSp" FT repeat_region 5322911..5322943 FT /rpt_family="(GAA)n" FT repeat_region 5323086..5323386 FT /rpt_family="AluSx" FT repeat_region complement(5323400..5323935) FT /rpt_family="LINE2" FT repeat_region 5323959..5324257 FT /rpt_family="AluSx" FT repeat_region 5324669..5324769 FT /rpt_family="MIR" FT repeat_region 5325960..5326258 FT /rpt_family="AluSx" FT repeat_region 5326531..5326716 FT /rpt_family="AluJo" FT repeat_region 5326717..5326884 FT /rpt_family="(GGAA)n" FT misc_feature complement(5327006..5327294) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 55.000" FT repeat_region complement(5327392..5327487) FT /rpt_family="MIR" FT repeat_region complement(5327618..5327909) FT /rpt_family="AluJo" FT repeat_region complement(5328126..5328419) FT /rpt_family="AluSx" FT repeat_region complement(5328420..5328548) FT /rpt_family="AluSq/x" FT misc_feature complement(5328554..5328655) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 88.000" FT repeat_region 5328681..5328838 FT /rpt_family="AluSx" FT repeat_region complement(5329274..5329349) FT /rpt_family="MIR" FT repeat_region 5329426..5329494 FT /rpt_family="MER45" FT repeat_region 5329495..5329792 FT /rpt_family="AluY" FT repeat_region 5329806..5330107 FT /rpt_family="AluSx" FT repeat_region 5330108..5330212 FT /rpt_family="MER45" FT repeat_region 5330295..5330394 FT /rpt_family="MIR" FT repeat_region complement(5330656..5330754) FT /rpt_family="MIR" FT misc_feature complement(5331015..5331119) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 58.000" FT repeat_region 5331133..5331160 FT /rpt_family="AT_rich" FT repeat_region complement(5331161..5331442) FT /rpt_family="AluJo" FT repeat_region complement(5331448..5331656) FT /rpt_family="MER20" FT repeat_region complement(5331860..5332050) FT /rpt_family="MIR" FT repeat_region complement(5332142..5332438) FT /rpt_family="AluSx" FT repeat_region 5332713..5332755 FT /rpt_family="MIR" FT repeat_region 5332883..5333176 FT /rpt_family="AluSx" FT misc_feature complement(5333222..5333313) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 69.000" FT repeat_region 5333355..5333518 FT /rpt_family="AluJo" FT repeat_region complement(5333703..5333793) FT /rpt_family="MIR" FT repeat_region 5333843..5333896 FT /rpt_family="(TGAA)n" FT repeat_region complement(5334375..5334601) FT /rpt_family="MIR" FT repeat_region 5334783..5334872 FT /rpt_family="MIR" FT repeat_region complement(5335339..5335403) FT /rpt_family="MIR" FT repeat_region 5335492..5335539 FT /rpt_family="(GGAA)n" FT misc_feature 5336516..5336574 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 54.000" FT misc_feature 5337259..5337350 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 98.000" FT misc_feature 5339063..5339198 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 66.000" FT repeat_region 5339771..5339824 FT /rpt_family="GC_rich" FT repeat_region complement(5340178..5340347) FT /rpt_family="GC_rich" FT repeat_region complement(5340413..5340459) FT /rpt_family="GC_rich" FT repeat_region complement(5340751..5340811) FT /rpt_family="GC_rich" FT repeat_region complement(5340855..5340972) FT /rpt_family="(CGG)n" FT repeat_region 5341064..5341107 FT /rpt_family="(CGG)n" FT repeat_region complement(5341326..5341452) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(5341639..5341939) FT /rpt_family="AluSx" FT repeat_region 5342187..5342261 FT /rpt_family="MIR" FT repeat_region 5342321..5342615 FT /rpt_family="AluSx" FT repeat_region 5343229..5343366 FT /rpt_family="MIR" FT repeat_region 5343413..5343702 FT /rpt_family="AluSx" FT repeat_region 5343709..5343995 FT /rpt_family="AluSx" FT repeat_region complement(5344055..5344114) FT /rpt_family="LINE2" FT repeat_region 5344135..5344379 FT /rpt_family="AluJo" FT repeat_region 5344419..5344665 FT /rpt_family="LINE2" FT repeat_region 5344801..5344843 FT /rpt_family="MIR" FT repeat_region 5344854..5345152 FT /rpt_family="AluY" FT repeat_region 5345269..5345569 FT /rpt_family="AluSq" FT repeat_region complement(5345663..5345964) FT /rpt_family="AluJo" FT misc_feature 5346572..5346730 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 53.000" FT repeat_region 5346806..5347924 FT /rpt_family="L1" FT repeat_region 5347944..5348007 FT /rpt_family="AT_rich" FT repeat_region 5348032..5348171 FT /rpt_family="MLT1B" FT repeat_region 5348172..5348473 FT /rpt_family="AluSq" FT repeat_region complement(5348478..5348584) FT /rpt_family="AluSq/x" FT repeat_region complement(5348585..5348726) FT /rpt_family="MLT1B" FT repeat_region 5453607..5453781 FT /rpt_family="AluSx" FT repeat_region complement(5453783..5453839) FT /rpt_family="AluS" FT repeat_region complement(5453864..5453952) FT /rpt_family="MLT1C" FT repeat_region complement(5454296..5454325) FT /rpt_family="LINE2" FT repeat_region complement(5454376..5454494) FT /rpt_family="LINE2" FT repeat_region complement(5454494..5454585) FT /rpt_family="MIR" FT repeat_region complement(5454837..5455029) FT /rpt_family="LINE2" FT CDS 5455530..5456792 FT /codon_start=1 FT /product="R31343_1" FT /note="Hypothetical human protein most similar to FT (AF037204) RING zinc finger protein [Homo sapiens]" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC62428.1" FT /translation="MPRASRVPVAASLPLSHAVIPTQLPSRPGHRPPGRPRRCPKASCL FT PPPVGPSSTQTAKRVTMGWPRPGRALVAVKALLVLSLLQVPAQAVVRAVLEDNSSSVDF FT ADLPALFGVPLAPEGIRGYLMEVKPANACHPIEAPRLGNRSLGAIVLIRRYDCTFDLKV FT LNAQRAGFEAAIVHNVHSDDLVSMTHVYEDLRGQIAIPSVFVSEAASQDLRVILGCNKS FT AHALLLPDDPPCHDLGCHPVLTVSWVLGCTLALVVSAFFVLNHLWLWAQACCSHRRPVK FT TSTCQKAQVRTFTWHNDLCAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCP FT VCKQSVAATEDSFDSTTYSFRDEDPSLPGHRPPIWAIQVQLRSRRLELLGRASPHCHCS FT TTSLEAEYTTVSSAPPEAPGQ" FT misc_feature complement(5456430..5456869) FT /note="DDS similarity to A913749 om21a11.s2 Soares_NFL_T_ FT GBC_S1 Homo sapiens cDNA clone IMAGE:1541660 3' similar to FT TR:Q90972 Q90972 RING ZINC FINGER PROTEIN. ~Score: 831 FT Identity: 432/439 (98%)." FT repeat_region complement(5457136..5457219) FT /rpt_family="L1MC3" FT repeat_region 5457251..5457336 FT /rpt_family="AluJo" FT repeat_region 5457346..5457646 FT /rpt_family="AluSc" FT repeat_region 5457650..5457805 FT /rpt_family="AluJo" FT repeat_region complement(5457991..5458214) FT /rpt_family="LINE2" FT repeat_region 5458246..5458548 FT /rpt_family="AluJo" FT repeat_region complement(5458592..5458774) FT /rpt_family="LINE2" FT repeat_region 5458785..5459084 FT /rpt_family="AluSc" FT repeat_region 5459129..5459427 FT /rpt_family="AluSx" FT repeat_region 5459435..5459518 FT /rpt_family="MLT1C" FT repeat_region complement(5459527..5459697) FT /rpt_family="MLT1B" FT repeat_region 5459736..5459903 FT /rpt_family="MIR" FT repeat_region complement(5459909..5460201) FT /rpt_family="AluSx" FT repeat_region 5460411..5460711 FT /rpt_family="AluJo" FT repeat_region 5460714..5460828 FT /rpt_family="MIR" FT repeat_region 5461106..5461330 FT /rpt_family="AluSq" FT repeat_region complement(5461352..5461726) FT /rpt_family="THE1C" FT repeat_region 5462521..5462833 FT /rpt_family="AluJo" FT repeat_region complement(5462952..5463378) FT /rpt_family="L1" FT repeat_region complement(5463389..5463476) FT /rpt_family="(GAA)n" FT repeat_region complement(5463478..5463778) FT /rpt_family="AluJo" FT repeat_region complement(5464022..5464235) FT /rpt_family="LINE2" FT repeat_region 5464245..5464612 FT /rpt_family="L1MC4" FT repeat_region 5464614..5464760 FT /rpt_family="AluJo" FT repeat_region 5464761..5465053 FT /rpt_family="AluY" FT repeat_region 5465080..5465252 FT /rpt_family="AluJo" FT repeat_region complement(5465269..5465519) FT /rpt_family="LINE2" FT repeat_region 5465769..5466069 FT /rpt_family="AluSx" FT repeat_region complement(5466326..5466522) FT /rpt_family="MER3" FT repeat_region complement(5466535..5466936) FT /rpt_family="LINE2" FT repeat_region 5467571..5467679 FT /rpt_family="MIR" FT repeat_region 5467717..5468017 FT /rpt_family="AluJo" FT repeat_region 5468029..5468171 FT /rpt_family="AluJo" FT repeat_region 5468173..5468473 FT /rpt_family="AluSx" FT repeat_region 5468474..5468652 FT /rpt_family="AluJo" FT repeat_region 5468655..5468955 FT /rpt_family="AluY" FT repeat_region 5468979..5469218 FT /rpt_family="MER7B" FT repeat_region 5469225..5469524 FT /rpt_family="AluSx" FT repeat_region 5469821..5469929 FT /rpt_family="MIR" FT repeat_region complement(5470092..5470391) FT /rpt_family="AluSx" FT repeat_region 5470421..5470940 FT /rpt_family="L1ME1" FT repeat_region 5470984..5471016 FT /rpt_family="MIR" FT repeat_region 5471047..5471338 FT /rpt_family="AluSq" FT repeat_region 5471350..5471631 FT /rpt_family="AluJb" FT repeat_region complement(5471817..5471985) FT /rpt_family="AluSg/x" FT repeat_region complement(5471986..5472286) FT /rpt_family="AluSx" FT repeat_region 5472873..5473141 FT /rpt_family="MIR" FT repeat_region complement(5473147..5473444) FT /rpt_family="AluSq" FT repeat_region complement(5473640..5473671) FT /rpt_family="MIR" FT repeat_region complement(5474008..5474036) FT /rpt_family="MIR" FT repeat_region complement(5474080..5474151) FT /rpt_family="LINE2" FT repeat_region 5474200..5474480 FT /rpt_family="AluSx" FT repeat_region complement(5474593..5474936) FT /rpt_family="LINE2" FT repeat_region complement(5474950..5475167) FT /rpt_family="LINE2" FT repeat_region complement(5475236..5475509) FT /rpt_family="AluJo" FT repeat_region 5475602..5475684 FT /rpt_family="MLT1D" FT repeat_region 5475713..5476013 FT /rpt_family="AluSg" FT repeat_region 5476014..5476042 FT /rpt_family="(GGGA)n" FT repeat_region 5476079..5476120 FT /rpt_family="MLT1D" FT repeat_region 5476122..5476341 FT /rpt_family="AluJb" FT repeat_region 5476344..5476370 FT /rpt_family="MLT1D" FT repeat_region 5476430..5476726 FT /rpt_family="AluY" FT repeat_region 5476730..5476852 FT /rpt_family="FLAM_C" FT misc_feature complement(5477044..5477189) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 89.000" FT repeat_region complement(5477214..5477269) FT /rpt_family="(GAAAA)n" FT repeat_region complement(5477271..5477583) FT /rpt_family="AluSx" FT repeat_region 5477725..5478069 FT /rpt_family="LINE2" FT repeat_region complement(5478699..5478775) FT /rpt_family="MIR" FT repeat_region 5479361..5479488 FT /rpt_family="MIR" FT repeat_region complement(5479573..5479873) FT /rpt_family="AluSx" FT repeat_region complement(5480373..5480765) FT /rpt_family="LINE2" FT repeat_region 5515249..5515475 FT /rpt_family="AluSq" FT misc_feature 5515153..5515238 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 58.000" FT repeat_region 5514600..5514887 FT /rpt_family="AluSp" FT repeat_region 5513863..5514086 FT /rpt_family="MLT1B" FT repeat_region 5513676..5513855 FT /rpt_family="AluSp" FT repeat_region 5513407..5513670 FT /rpt_family="AluSx" FT repeat_region 5513115..5513404 FT /rpt_family="AluJo" FT misc_feature 5512801..5512927 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 77.000" FT repeat_region complement(5512568..5512653) FT /rpt_family="MIR" FT repeat_region complement(5511898..5512174) FT /rpt_family="AluSx" FT repeat_region complement(5511579..5511850) FT /rpt_family="AluSx" FT repeat_region complement(5511318..5511534) FT /rpt_family="MLT1D" FT repeat_region complement(5511026..5511286) FT /rpt_family="AluSq" FT repeat_region 5510793..5511022 FT /rpt_family="AluSx" FT repeat_region complement(5510710..5510741) FT /rpt_family="(CAAA)n" FT repeat_region complement(5510600..5510693) FT /rpt_family="MLT1D" FT repeat_region 5510137..5510157 FT /rpt_family="AT_rich" FT repeat_region 5509825..5510136 FT /rpt_family="AluSx" FT repeat_region 5509638..5509693 FT /rpt_family="(GA)n" FT repeat_region 5509153..5509462 FT /rpt_family="AluY" FT repeat_region 5508884..5509063 FT /rpt_family="MER53" FT repeat_region 5508579..5508883 FT /rpt_family="AluSx" FT repeat_region 5508542..5508577 FT /rpt_family="MER53" FT repeat_region 5508387..5508408 FT /rpt_family="AT_rich" FT repeat_region complement(5508091..5508383) FT /rpt_family="AluY" FT repeat_region 5507952..5508083 FT /rpt_family="FLAM_C" FT repeat_region 5506837..5507142 FT /rpt_family="AluSx" FT repeat_region 5506675..5506823 FT /rpt_family="FLAM_C" FT repeat_region complement(5506443..5506654) FT /rpt_family="MER20" FT repeat_region 5506174..5506294 FT /rpt_family="LINE2" FT repeat_region complement(5505820..5506119) FT /rpt_family="AluSx" FT repeat_region complement(5505650..5505729) FT /rpt_family="MER47B" FT repeat_region 5505599..5505659 FT /rpt_family="MER47B" FT repeat_region 5505300..5505598 FT /rpt_family="AluSg" FT repeat_region 5504884..5505189 FT /rpt_family="MLT1A2" FT repeat_region 5504104..5504386 FT /rpt_family="LINE2" FT repeat_region complement(5503996..5504047) FT /rpt_family="MIR" FT repeat_region complement(5503437..5503606) FT /rpt_family="MLT1C" FT repeat_region complement(5503135..5503436) FT /rpt_family="AluSg" FT repeat_region complement(5503048..5503134) FT /rpt_family="MLT1B" FT repeat_region 5502733..5503037 FT /rpt_family="AluJo" FT repeat_region complement(5502451..5502525) FT /rpt_family="MLT1B" FT repeat_region 5502224..5502450 FT /rpt_family="MLT1F" FT repeat_region 5502163..5502202 FT /rpt_family="(GAAA)n" FT repeat_region 5502014..5502153 FT /rpt_family="(GA)n" FT repeat_region 5501722..5501986 FT /rpt_family="AluSq" FT repeat_region 5501465..5501700 FT /rpt_family="MLT1F" FT repeat_region complement(5501334..5501403) FT /rpt_family="MIR" FT repeat_region complement(5500941..5501119) FT /rpt_family="MIR" FT misc_feature complement(5500695..5500739) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 58.000" FT repeat_region 5500280..5500586 FT /rpt_family="AluJb" FT repeat_region 5500142..5500274 FT /rpt_family="AluSq" FT repeat_region 5499837..5500131 FT /rpt_family="AluSx" FT misc_feature complement(5499267..5499540) FT /note="BLASTN similarity to Z66205 (1..275); match: 0.92, FT score: 3.1e-98; database searched: nt; H.sapiens CpG DNA, FT clone 81b4, reverse read cpg81b4.rt1a ." FT misc_feature 5499230..5499489 FT /note="BLASTN similarity to Z66204 (262..1); match: 0.72, FT score: 9.9e-75; database searched: nt; H.sapiens CpG DNA, FT clone 81b3, forward read cpg81b3.ft1a ." FT misc_feature 5497695..5497806 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: marginal, score: 49.000" FT repeat_region complement(5497330..5497657) FT /rpt_family="LINE2" FT repeat_region 5496981..5497282 FT /rpt_family="AluSx" FT repeat_region 5496528..5496621 FT /rpt_family="LINE2" FT repeat_region 5495590..5495886 FT /rpt_family="AluSx" FT repeat_region 5495279..5495577 FT /rpt_family="AluSg" FT misc_feature complement(5494787..5495063) FT /note="BLASTN similarity to Z60741 (1..280); match: 0.85, FT score: 1.0e-82; database searched: nt; H.sapiens CpG DNA, FT clone 33c4, forward read cpg33c4.ft1a ." FT misc_feature 5494787..5495055 FT /note="BLASTN similarity to Z60742 (303..31); match: 0.73, FT score: 1.9e-52; database searched: nt; H.sapiens CpG DNA, FT clone 33c4, reverse read cpg33c4.rt1d ." FT repeat_region 5494468..5494770 FT /rpt_family="AluSq" FT repeat_region 5494161..5494464 FT /rpt_family="AluSx" FT repeat_region 5493965..5494152 FT /rpt_family="AluJb" FT repeat_region complement(5493648..5493953) FT /rpt_family="AluSx" FT repeat_region 5492471..5492507 FT /rpt_family="(TGAA)n" FT repeat_region 5492364..5492469 FT /rpt_family="LINE2" FT repeat_region complement(5492268..5492356) FT /rpt_family="MIR" FT repeat_region 5491876..5492175 FT /rpt_family="AluSx" FT repeat_region 5491672..5491874 FT /rpt_family="MER20" FT repeat_region 5490842..5491137 FT /rpt_family="AluSx" FT repeat_region 5490716..5490836 FT /rpt_family="LINE2" FT repeat_region complement(5490251..5490547) FT /rpt_family="AluJb" FT repeat_region complement(5489510..5489544) FT /rpt_family="MIR" FT repeat_region 5489151..5489450 FT /rpt_family="AluSx" FT misc_feature complement(5489096..5489145) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 61.000" FT repeat_region complement(5488723..5489023) FT /rpt_family="AluSx" FT repeat_region complement(5488561..5488652) FT /rpt_family="AluJ/FLAM" FT repeat_region complement(5488198..5488491) FT /rpt_family="AluSx" FT repeat_region complement(5487902..5488185) FT /rpt_family="AluY" FT repeat_region complement(5487720..5487895) FT /rpt_family="FRAM" FT repeat_region complement(5487323..5487464) FT /rpt_family="MIR" FT repeat_region complement(5487024..5487315) FT /rpt_family="AluSx" FT repeat_region 5486531..5486583 FT /rpt_family="AluSc" FT repeat_region 5486220..5486404 FT /rpt_family="AluJo" FT repeat_region complement(5485928..5486217) FT /rpt_family="AluSg" FT repeat_region 5485623..5485903 FT /rpt_family="AluJo" FT repeat_region complement(5484199..5484381) FT /rpt_family="MIR" FT repeat_region complement(5483983..5484188) FT /rpt_family="MER58B" FT repeat_region 5483671..5483967 FT /rpt_family="AluJo" FT repeat_region complement(5483332..5483628) FT /rpt_family="AluY" FT repeat_region complement(5483230..5483292) FT /rpt_family="MIR" FT repeat_region complement(5483032..5483136) FT /rpt_family="MIR" FT repeat_region complement(5482829..5482959) FT /rpt_family="LINE2" FT repeat_region 5482582..5482666 FT /rpt_family="(GGAA)n" FT repeat_region complement(5481951..5482528) FT /rpt_family="MLT1E" FT misc_feature complement(5481823..5481947) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 80.000" FT repeat_region 5481397..5481465 FT /rpt_family="MER3" FT repeat_region complement(5480996..5481394) FT /rpt_family="L1MB3" FT repeat_region 5480876..5480995 FT /rpt_family="AluSq/x" FT repeat_region 5515331..5515540 FT /rpt_family="AluSg/x" FT repeat_region complement(5516365..5516576) FT /rpt_family="MLT1E" FT repeat_region complement(5516594..5516660) FT /rpt_family="(GAA)n" FT repeat_region complement(5516661..5516968) FT /rpt_family="AluJo" FT repeat_region 5517239..5517532 FT /rpt_family="AluJb" FT repeat_region 5517533..5517586 FT /rpt_family="(CA)n" FT repeat_region 5518093..5518399 FT /rpt_family="AluJo" FT repeat_region 5518416..5518707 FT /rpt_family="AluY" FT repeat_region 5518708..5518796 FT /rpt_family="(GAAA)n" FT repeat_region complement(5518943..5519287) FT /rpt_family="AluYb8" FT repeat_region complement(5519462..5519585) FT /rpt_family="FLAM_C" FT repeat_region complement(5519596..5519799) FT /rpt_family="AluJo" FT repeat_region 5519876..5520175 FT /rpt_family="AluY" FT repeat_region 5520189..5520353 FT /rpt_family="AluJb" FT repeat_region 5520455..5520519 FT /rpt_family="AluSp" FT repeat_region 5520662..5520714 FT /rpt_family="MLT1F" FT repeat_region complement(5520730..5520772) FT /rpt_family="MIR" FT repeat_region complement(5520829..5520962) FT /rpt_family="AluSg/x" FT repeat_region 5521143..5521336 FT /rpt_family="L1MB3" FT repeat_region 5521344..5521618 FT /rpt_family="AluJo" FT repeat_region 5521623..5521663 FT /rpt_family="L1MB4" FT repeat_region complement(5521664..5521960) FT /rpt_family="AluSq" FT misc_feature complement(5522030..5522065) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 75.000" FT repeat_region complement(5522095..5522164) FT /rpt_family="MIR" FT repeat_region 5522601..5522702 FT /rpt_family="LINE2" FT repeat_region 5522720..5523016 FT /rpt_family="AluY" FT repeat_region 5523017..5523217 FT /rpt_family="LINE2" FT repeat_region 5523209..5523489 FT /rpt_family="LINE2" FT repeat_region 5523748..5524035 FT /rpt_family="AluSx" FT repeat_region complement(5524125..5524238) FT /rpt_family="(GA)n" FT repeat_region complement(5524729..5524846) FT /rpt_family="(TGGA)n" FT repeat_region complement(5524875..5524993) FT /rpt_family="(TAGG)n" FT repeat_region complement(5524998..5525103) FT /rpt_family="(TGGA)n" FT repeat_region complement(5525104..5525221) FT /rpt_family="(TGGA)n" FT repeat_region complement(5525240..5525449) FT /rpt_family="(TGGA)n" FT repeat_region complement(5525450..5525504) FT /rpt_family="(TGGA)n" FT repeat_region 5525505..5525709 FT /rpt_family="(TGGA)n" FT repeat_region complement(5525721..5525859) FT /rpt_family="(TGGA)n" FT repeat_region 5525838..5525881 FT /rpt_family="(CA)n" FT repeat_region complement(5525885..5526024) FT /rpt_family="LINE2" FT repeat_region complement(5526147..5526197) FT /rpt_family="LINE2" FT repeat_region complement(5526336..5526411) FT /rpt_family="LINE2" FT repeat_region 5526530..5526609 FT /rpt_family="AluJ/FRAM" FT repeat_region complement(5526652..5526685) FT /rpt_family="(TAAAA)n" FT repeat_region complement(5526700..5526867) FT /rpt_family="AluJo" FT repeat_region complement(5527075..5527143) FT /rpt_family="(GGAA)n" FT repeat_region 5527145..5527224 FT /rpt_family="AluSg/x" FT repeat_region complement(5527238..5527312) FT /rpt_family="LINE2" FT repeat_region 5527324..5527632 FT /rpt_family="AluSx" FT repeat_region 5527642..5527684 FT /rpt_family="AluSg/x" FT repeat_region 5527785..5527897 FT /rpt_family="FLAM_A" FT repeat_region complement(5527943..5527975) FT /rpt_family="LINE2" FT repeat_region 5528051..5528352 FT /rpt_family="AluSx" FT repeat_region 5528353..5528423 FT /rpt_family="(GAA)n" FT repeat_region 5528435..5528505 FT /rpt_family="FLAM_A" FT repeat_region complement(5528552..5528843) FT /rpt_family="AluSx" FT repeat_region complement(5528992..5529294) FT /rpt_family="AluSg" FT repeat_region complement(5530042..5530151) FT /rpt_family="MIR" FT repeat_region 5530206..5530329 FT /rpt_family="AluJb" FT repeat_region 5530401..5530701 FT /rpt_family="AluSx" FT repeat_region 5530718..5530808 FT /rpt_family="MIR" FT repeat_region 5531092..5531187 FT /rpt_family="MIR" FT repeat_region 5531231..5531520 FT /rpt_family="AluSg" FT repeat_region complement(5531521..5531662) FT /rpt_family="LINE2" FT repeat_region 5531677..5531962 FT /rpt_family="AluSx" FT repeat_region complement(5531963..5532061) FT /rpt_family="(TA)n" FT repeat_region 5532063..5532202 FT /rpt_family="(TA)n" FT repeat_region 5532208..5532254 FT /rpt_family="(CA)n" FT repeat_region complement(5532256..5532318) FT /rpt_family="LINE2" FT repeat_region complement(5532328..5532628) FT /rpt_family="AluY" FT repeat_region complement(5532629..5532761) FT /rpt_family="LINE2" FT repeat_region complement(5532805..5532964) FT /rpt_family="AluJ" FT repeat_region complement(5532965..5533239) FT /rpt_family="AluSx" FT repeat_region complement(5533240..5533325) FT /rpt_family="AluJ" FT repeat_region complement(5533329..5533645) FT /rpt_family="LINE2" FT repeat_region complement(5534182..5534479) FT /rpt_family="AluY" FT repeat_region complement(5534536..5534691) FT /rpt_family="AluJb" FT repeat_region complement(5534692..5534996) FT /rpt_family="AluJo" FT repeat_region 5535475..5535706 FT /rpt_family="AluJo" FT repeat_region 5535722..5535886 FT /rpt_family="FRAM" FT repeat_region complement(5536024..5536087) FT /rpt_family="LINE2" FT repeat_region complement(5536389..5536459) FT /rpt_family="LINE2" FT repeat_region complement(5536726..5536766) FT /rpt_family="GC_rich" FT repeat_region complement(5537070..5537118) FT /rpt_family="LINE2" FT repeat_region complement(5537121..5537298) FT /rpt_family="AluSg/x" FT repeat_region complement(5537303..5537594) FT /rpt_family="AluJb" FT repeat_region complement(5537608..5537741) FT /rpt_family="FLAM_C" FT repeat_region complement(5537925..5537971) FT /rpt_family="MIR" FT repeat_region complement(5538264..5538432) FT /rpt_family="FLAM_A" FT repeat_region 5538498..5538603 FT /rpt_family="FLAM_C" FT repeat_region complement(5538610..5538630) FT /rpt_family="AT_rich" FT repeat_region complement(5538631..5538931) FT /rpt_family="AluSx" FT repeat_region 5538952..5539124 FT /rpt_family="AluJo" FT misc_feature complement(5539748..5539880) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 59.000" FT repeat_region 5540020..5540301 FT /rpt_family="AluJb" FT misc_feature complement(5540324..5540466) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 68.000" FT repeat_region complement(5540720..5540816) FT /rpt_family="MIR" FT repeat_region 5540849..5541153 FT /rpt_family="AluY" FT repeat_region 5541172..5541475 FT /rpt_family="AluJo" FT repeat_region 5541623..5541686 FT /rpt_family="MIR" FT repeat_region 5541956..5542035 FT /rpt_family="AluJ/FRAM" FT repeat_region 5542054..5542349 FT /rpt_family="AluSx" FT repeat_region 5542350..5542650 FT /rpt_family="AluSx" FT repeat_region 5542997..5543262 FT /rpt_family="AluSx" FT repeat_region 5543297..5543599 FT /rpt_family="AluY" FT misc_feature complement(5543839..5544091) FT /note="BLASTN similarity to Z60257 (1..255); match: 0.99, FT score: 7.8e-90; database searched: nt; H.sapiens CpG DNA, FT clone 198a8, forward read cpg198a8.ft1a ." FT repeat_region complement(5544428..5544724) FT /rpt_family="AluJo" FT repeat_region complement(5544735..5545024) FT /rpt_family="AluSx" FT repeat_region complement(5545201..5545342) FT /rpt_family="MIR" FT repeat_region complement(5545421..5545593) FT /rpt_family="AluSc" FT repeat_region complement(5545594..5545896) FT /rpt_family="AluSx" FT repeat_region 5545898..5545953 FT /rpt_family="MLT2A" FT repeat_region complement(5546710..5546821) FT /rpt_family="AluJb" FT repeat_region 5546828..5546891 FT /rpt_family="AluSp/q" FT repeat_region 5547146..5547229 FT /rpt_family="MER33" FT repeat_region 5547236..5547519 FT /rpt_family="AluSq" FT repeat_region 5547520..5547546 FT /rpt_family="(CA)n" FT repeat_region 5547554..5547637 FT /rpt_family="MER33" FT repeat_region complement(5547638..5547921) FT /rpt_family="AluSp" FT misc_feature 5547955..5548159 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 57.000" FT repeat_region complement(5548278..5548569) FT /rpt_family="AluJb" FT repeat_region 5548587..5549027 FT /rpt_family="LTR7" FT repeat_region 5549028..5549969 FT /rpt_family="HERVH" FT repeat_region complement(5581185..5581479) FT /rpt_family="AluSx" FT repeat_region complement(5581737..5582013) FT /rpt_family="AluJo" FT misc_feature 5582695..5582779 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 77.000" FT repeat_region 5582704..5582792 FT /rpt_family="MLT1C" FT repeat_region 5582799..5583097 FT /rpt_family="AluSq" FT repeat_region complement(5583578..5583881) FT /rpt_family="AluSq" FT repeat_region complement(5584042..5584244) FT /rpt_family="MIR" FT repeat_region 5584377..5584530 FT /rpt_family="FRAM" FT repeat_region 5584531..5584787 FT /rpt_family="L1ME" FT repeat_region 5584888..5585185 FT /rpt_family="AluSx" FT repeat_region 5585196..5585455 FT /rpt_family="MLT1C" FT repeat_region 5586803..5586907 FT /rpt_family="MIR" FT misc_feature 5587010..5587411 FT /note="DDS similarity to overlapping ESTs:~(7072..7473) FT AA554701 nl15d09.s1 NCI_CGAP_Br2 Homo sapiens cDNA clone FT IMAGE:1030385; (1..402); 100% identity.~~(7073..7350) FT T48741 yb02c10.s1 Homo sapiens cDNA clone 70002 3'. Score: FT 549 Identity: 278/279 (99%).~~(7369..7099) T48740 FT yb02c10.r1 Homo sapiens cDNA clone 70002 5' contains Alu FT repetitive element. Score: 527 Identity: 269/272 (98%)." FT repeat_region complement(5587092..5587114) FT /rpt_family="AT_rich" FT gene complement(5587254..5622726) FT /gene="KIAA0138" FT /note="Novel human gene isolated from male myeloblast FT cell_line:KG-1" FT CDS complement(join(5587254..5587410,5587712..5587778, FT 5587879..5587991,5590289..5590419,5591759..5591804, FT 5592758..5592898,5593902..5594189,5595372..5595508, FT 5598804..5598895,5600141..5600271,5604594..5604706, FT 5604798..5604947,5610006..5610106,5610650..5610699, FT 5611131..5611641,5612551..5612578,5613476..5613538, FT 5616143..5616346,5616433..5616497,5621320..5621407, FT 5622541..5622726)) FT /codon_start=1 FT /gene="KIAA0138" FT /product="KIAA0138" FT /note="Novel 107.5 kDa acidic protein; Highly similar (71% FT identity) to (L43631) scaffold attachment factor [Homo FT sapiens]" FT /protein_id="AAC14666.1" FT /translation="MAETLPGSGDSGPGTASLGPGVAETGTRRLSELRVIDLRAELKKR FT NLDTGGNKSVLMERLKKAVKEEGQDPDEIGIELEATSKKSAKRCVKGLKMEEEGTEDNG FT LEDDSRDGQEDMEASLENLQNMGMMDMSVLDETEVANSSAPDFGEDGTDGLLDSFCDSK FT EYVAAQLRQLPAQPPEHAVDGEGFKNTLETSSLNFKVTPDIEESLLEPENEKILDILGE FT TCKSEPVKEESSELEQPFAQDTSSVGPDRKLAEEEDLFDSAHPEEGDLDLASESTAHAQ FT SSKADSLLAVVKREPAEQPGDGERTDCEPVGLEPAVEQSSAASELAEASSEELAEAPTE FT APSPEARDSKEDGRKFDFDACNEVPPAPKESSTSEGADQKMSSFKEEKDIKPIIKDEKG FT RVGSGSGRNLWVSGLSSTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTS FT DEATKCISHLHRTELHGRMISVEKAKNEPAGKKLSDRKECEVKKEKLSSVDRHHSVEIK FT IEKTVIKKEEKIEKKEEKKPEDIKKEEKDQDELKPGPTNRSRVTKSGSRGMERTVVMDK FT SKGEPVISVKTTSRSKERSSKSQDRKSESKEKRDILSFDKIKEQRERERQRQREREIRE FT TERRREREQREREQRLEAFHERKEKARLQRERLQLECQRQRLERERMERERLERERMRV FT ERERRKEQERIHREREELRRQQEQLRYEQERRPGRRPYDLDRRDDAYWPEGKRVAMEDR FT YRADFPRPDHRFHDFDHRDRGQYQDHAIDRREGSRPMMGDHRDGQHYGDDRHGHGGPPE FT RHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGGRDWGEHNQRLEEHQARAWQGAMDAGAA FT SREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVPGGGLEGGGVASQ FT DRGSRVPHPHPHPPPYPHFTRRY" FT misc_feature complement(5587274..5587307) FT /gene="KIAA0138" FT /note="BLASTN similarity to T48740 (1..34); match: 0.88, FT score: 6.5e-103; database searched: est; yb02c10.r1 Homo FT sapiens cDNA clone 70002 5' contains Alu repetitive FT element." FT misc_feature complement(5587282..5587410) FT /gene="KIAA0138" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 61.000" FT repeat_region 5588115..5588896 FT /rpt_family="L1MB7" FT misc_feature 5589220..5589497 FT /gene="KIAA0138" FT /note="DDS similarity to AA368399 EST79650 Placenta I Homo FT sapiens cDNA. Score: 541 Identity: 276/279 (98%)." FT misc_feature complement(5590288..5590389) FT /gene="KIAA0138" FT /note="BLASTN similarity to AA906446 (26..127); match: FT 0.91, score: 2.8e-27; database searched: month.na; FT oj94f11.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone FT IMAGE:1505997 3' similar to TR:Q15424 Q15424 SCAFFOLD FT ATTACHMENT" FT misc_feature complement(5590289..5590419) FT /gene="KIAA0138" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region complement(5591287..5591587) FT /rpt_family="AluSq" FT misc_feature complement(5591949..5592250) FT /gene="KIAA0138" FT /note="DDS similarity to N77965 yv70a05.r1 Soares fetal FT liver spleen 1NFLS Homo sapiens cDNA clone 248048 5'~Score: FT 591 Identity: 300/301 (99%)." FT misc_feature complement(5592697..5592898) FT /gene="KIAA0138" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 91.000" FT repeat_region 5592943..5592984 FT /rpt_family="(GGA)n" FT misc_feature complement(5593902..5594189) FT /gene="KIAA0138" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region 5594752..5594844 FT /rpt_family="FLAM_C" FT repeat_region complement(5594868..5595159) FT /rpt_family="AluJo" FT misc_feature complement(5595372..5595493) FT /gene="KIAA0138" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region 5595994..5596289 FT /rpt_family="AluSg" FT repeat_region complement(5596365..5596653) FT /rpt_family="AluJb" FT repeat_region 5596726..5596875 FT /rpt_family="MER5B" FT repeat_region 5597165..5597215 FT /rpt_family="MIR" FT repeat_region 5597295..5597369 FT /rpt_family="AluJ/FLAM" FT repeat_region 5597431..5597483 FT /rpt_family="POLY_A" FT repeat_region 5597859..5598165 FT /rpt_family="AluSx" FT repeat_region complement(5600185..5600261) FT /rpt_family="(GAA)n" FT repeat_region complement(5601156..5601176) FT /rpt_family="AT_rich" FT repeat_region 5601440..5601741 FT /rpt_family="AluSc" FT repeat_region 5602208..5602510 FT /rpt_family="AluY" FT repeat_region 5602536..5602646 FT /rpt_family="MIR" FT repeat_region 5602999..5603278 FT /rpt_family="AluJo" FT repeat_region complement(5603281..5603318) FT /rpt_family="AT_rich" FT repeat_region 5604140..5604422 FT /rpt_family="AluJb" FT misc_feature complement(5604590..5604706) FT /gene="KIAA0138" FT /standard_name="exon" FT /note="DDS similarity to overlapping ESTs:~(24768..24652) FT T61600 yb86e03.s1 Homo sapiens cDNA clone 78076 3' similar FT to SP:GRPA_MAIZE P10979 GLYCINE-RICH RNA-BINDING, ABSCISIC FT ACID-INDUCIBLE ; (143..1); 98% identity.~~(24768..24735) FT AA607193 vm84e07.r1 Knowles Solter mouse blastocyst B1 Mus FT musculus cDNA clone 1004964 5' similar to TR:G1213639 FT G1213639 SCAFFOLD ATTACHMENT FACTOR; (345..377); 67% FT identity.~~predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 87.000" FT misc_feature complement(5604798..5604947) FT /gene="KIAA0138" FT /standard_name="exon" FT /note="DDS similarity to overlapping ESTs:~AA607193 FT vm84e07.r1 Knowles Solter mouse blastocyst B1 Mus musculus FT cDNA clone 1004964 5' similar to TR:G1213639 G1213639 FT SCAFFOLD ATTACHMENT FACTOR ; (194..344); 80% FT identity.~~T61600 yb86e03.s1 Homo sapiens cDNA clone 78076 FT 3' similar to SP:GRPA_MAIZE P10979 GLYCINE-RICH FT RNA-BINDING, ABSCISIC ACID-INDUCIBLE ; (293..144); 98% FT identity." FT repeat_region complement(5605119..5605415) FT /rpt_family="AluSx" FT repeat_region 5605670..5606352 FT /rpt_family="L1M4" FT repeat_region 5606355..5606648 FT /rpt_family="AluJb" FT repeat_region 5606681..5606987 FT /rpt_family="L1M4" FT repeat_region 5606991..5607291 FT /rpt_family="AluY" FT repeat_region 5607295..5607361 FT /rpt_family="(CAAAA)n" FT repeat_region 5607384..5607684 FT /rpt_family="L1M4" FT repeat_region 5608779..5609082 FT /rpt_family="AluSx" FT repeat_region complement(5609313..5609577) FT /rpt_family="AluSx" FT repeat_region complement(5609818..5609947) FT /rpt_family="FLAM_C" FT misc_feature complement(5610006..5610106) FT /gene="KIAA0138" FT /standard_name="exon" FT /note="DDS similarity to overlapping ESTs:~AA607193 FT vm84e07.r1 Knowles Solter mouse blastocyst B1 Mus musculus FT cDNA clone 1004964 5' similar to TR:G1213639 G1213639 FT SCAFFOLD ATTACHMENT FACTOR ; (93..193); 78% FT identity.~~T61600 yb86e03.s1 Homo sapiens cDNA clone 78076 FT 3' similar to SP:GRPA_MAIZE P10979 GLYCINE-RICH FT RNA-BINDING, ABSCISIC ACID-INDUCIBLE ; (395..294); 99% FT identity.~~predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 68.000" FT misc_feature complement(5610650..5610699) FT /gene="KIAA0138" FT /standard_name="exon" FT /note="DDS similarity to overlapping ESTs:~AA607193 FT vm84e07.r1 Knowles Solter mouse blastocyst B1 Mus musculus FT cDNA clone 1004964 5' similar to TR:G1213639 G1213639 FT SCAFFOLD ATTACHMENT FACTOR ; (43..92); 94% identity.~T61600 FT yb86e03.s1 Homo sapiens cDNA clone 78076 3' similar to FT SP:GRPA_MAIZE P10979 GLYCINE-RICH RNA-BINDING, ABSCISIC FT ACID-INDUCIBLE ; (446..396); 98% identity.~~predicted exon, FT program: grail2exons_human_1.3, frame: 2, quality: FT excellent, score: 93.000" FT misc_feature complement(5611131..5611641) FT /gene="KIAA0138" FT /standard_name="exon" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 78.000~~DDS similarity FT to overlapping ESTs:~(31682..31193) W27364 30h10 Human FT retina cDNA randomly primed sublibrary Homo sapiens FT cDNA.~Score: 653 Identity: 437/502 (87%).~~(31668..31185) FT AA019361 ze59d12.r1 Soares retina N2b4HR Homo sapiens cDNA FT clone 363287 5'~Score: 855 Identity: 470/487 FT (96%).~~(31234..31193) AA607193 vm84e07.r1 Knowles Solter FT mouse blastocyst B1 Mus musculus cDNA clone 1004964 5' FT similar to TR:G1213639 G1213639 SCAFFOLD ATTACHMENT FACTOR FT ; (1..42); 98% identical.~~(31227..31193) T61600 yb86e03.s1 FT Homo sapiens cDNA clone 78076 3' similar to SP:GRPA_MAIZE FT P10979 GLYCINE-RICH RNA-BINDING, ABSCISIC ACID-INDUCIBLE ; FT (481..447); 100% identity." FT misc_feature complement(5613476..5613538) FT /gene="KIAA0138" FT /standard_name="exon" FT /note="DDS similarity to overlapping ESTs:~AA478202 FT zu40e01.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 740472 5' similar to TR:G1213639 G1213639 SCAFFOLD FT ATTACHMENT FACTOR; (81..19); 97% identity.~~W26086 18h10 FT Human retina cDNA randomly primed sublibrary Homo sapiens FT cDNA (77..15); 95% identity.~~predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: good, score: FT 57.000" FT repeat_region complement(5613975..5614263) FT /rpt_family="AluSq" FT repeat_region 5614940..5615079 FT /rpt_family="AluSq/x" FT repeat_region 5615084..5615385 FT /rpt_family="AluSg" FT repeat_region 5615438..5615724 FT /rpt_family="AluJo" FT repeat_region 5615753..5615880 FT /rpt_family="FLAM_A" FT misc_feature complement(5616143..5616346) FT /gene="KIAA0138" FT /standard_name="exon" FT /note="DDS similarity to overlapping ESTs:~AA478202 FT zu40e01.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 740472 5' similar to TR:G1213639 G1213639 SCAFFOLD FT ATTACHMENT FACTOR; (285..82); 100% identity.~~W26086 18h10 FT Human retina cDNA randomly primed sublibrary Homo sapiens FT cDNA (281..78); 99% identity." FT misc_feature complement(5616433..5616497) FT /gene="KIAA0138" FT /standard_name="exon" FT /note="DDS similarity to overlapping ESTs:~AA478202 FT zu40e01.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 740472 5' similar to TR:G1213639 G1213639 SCAFFOLD FT ATTACHMENT FACTOR; (350..286); 100% identity.~~W26086 18h10 FT Human retina cDNA randomly primed sublibrary Homo sapiens FT cDNA. (346..282); 98% identity.~~predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 100.000" FT repeat_region complement(5616661..5616960) FT /rpt_family="AluSg" FT repeat_region 5617612..5617788 FT /rpt_family="MER20" FT repeat_region 5617876..5618147 FT /rpt_family="AluJo" FT repeat_region 5618200..5618391 FT /rpt_family="AluY" FT repeat_region 5619569..5619872 FT /rpt_family="AluSq" FT repeat_region 5620500..5620859 FT /rpt_family="L1MB6" FT misc_feature complement(5621320..5621407) FT /gene="KIAA0138" FT /standard_name="exon" FT /note="DDS similarity to overlapping ESTs:~AA478202 FT zu40e01.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 740472 5' similar to TR:G1213639 G1213639 SCAFFOLD FT ATTACHMENT FACTOR; (438..351); 99% identity.~~W26086 18h10 FT Human retina cDNA randomly primed sublibrary Homo sapiens FT cDNA. (434..347); 96% identity.~~predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 86.000" FT repeat_region complement(5622010..5622137) FT /rpt_family="LINE2" FT repeat_region complement(5622179..5622243) FT /rpt_family="MIR" FT repeat_region complement(5622350..5622390) FT /rpt_family="MIR" FT repeat_region complement(5622450..5622536) FT /rpt_family="GC_rich" FT misc_feature complement(5622541..5622806) FT /note="DDS similarity to overlapping ESTs:~(42868..42603) FT T61684 yb86e03.r1 Homo sapiens cDNA clone 78076 5'; FT (77..346); 87% identity.~~(42653..42603) AA478202 FT zu40e01.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 740472 5' similar to TR:G1213639 G1213639 SCAFFOLD FT ATTACHMENT FACTOR; (488..439); 98% identity~~(42788..42603) FT predicted exon, program: grail2exons_human_1.3, frame: 1, FT quality: excellent, score: 91.000" FT misc_feature 5623166..5623405 FT /note="DDS similarity to AA530797 vj51b03.r1 Stratagene FT mouse heart (#937316) Mus musculus cDNA clone 932525 5' FT similar to TR:G1213639 G1213639 SCAFFOLD ATTACHMENT FACTOR FT ; (572..510); 85% identity.~~BLASTN similarity to AA885667 FT (15..251); match: 0.77, score: 1.3e-67; database searched: FT month.na; oj34a10.s1 NCI_CGAP_Lu5 Homo sapiens cDNA clone FT IMAGE:1500186 3' similar to TR:Q15424 Q15424 SCAFFOLD FT ATTACHMENT" FT gene 5623172..>5626500 FT /map="19p13.3" FT /gene="HET" FT /note="Human Hsp27 ERE-TATA-binding protein; SAFB" FT CDS join(5623217..5623405,5626416..>5626500) FT /codon_start=1 FT /gene="HET" FT /product="Hsp27 ERE-TATA-binding protein" FT /note="Heat shock protein Hsp27 promoter binding protein; FT Extends amino terminus of Homo sapiens scaffold attachment FT factor by approximately 66 residues" FT /protein_id="AAC14667.1" FT /translation="MAETLSGLGDSGAAGAAALSSASSETGTRRLSDLRVIDLRAELRK FT RNVDSSGNKSVLMERLKKAIEDEGGNPDEIEITSEGNKKTSKRSSK" FT misc_feature 5623343..5623405 FT /gene="HET" FT /note="DDS similarity to AA530797 vj51b03.r1 Stratagene FT mouse heart (#937316) Mus musculus cDNA clone 932525 5' FT similar to TR:G1213639 G1213639 SCAFFOLD ATTACHMENT FACTOR FT ; (509..447); 89% identity." FT repeat_region complement(5623456..5623558) FT /rpt_family="GC_rich" FT repeat_region complement(5623752..5623817) FT /rpt_family="MIR" FT misc_feature complement(5623962..5624036) FT /gene="HET" FT /note="DDS similarity to T61684 yb86e03.r1 Homo sapiens FT cDNA clone 78076 5'; (1..76); 97% identity." FT repeat_region 5624273..5624366 FT /rpt_family="MIR" FT repeat_region complement(5626110..5626229) FT /rpt_family="MIR" FT misc_feature 5626416..5626526 FT /note="DDS similarity to overlapping ESTs:~AA530797 FT vj51b03.r1 Stratagene mouse heart (#937316) Mus musculus FT cDNA clone 932525 5' similar to TR:G1213639 G1213639 FT SCAFFOLD ATTACHMENT FACTOR ; (446..340); 74% FT identity.~~AA191316 zp83a12.s1 Stratagene HeLa cell s3 FT 937216 Homo sapiens cDNA clone 626782 3' similar to FT TR:G1213639 G1213639 SCAFFOLD ATTACHMENT FACTOR ;~Score: FT 156 Identity: 88/88 (100%).~~AA191325 zp83b11.s1 FT Stratagene HeLa cell s3 937216 Homo sapiens cDNA clone FT 626781 3' similar to TR:G1213639 G1213639 SCAFFOLD FT ATTACHMENT FACTOR ; (1..88); 100% identity.~~Other FT matches:~AA885667" FT repeat_region 5626777..5626990 FT /rpt_family="AluJb" FT gene 5914301..5915887 FT /map="19p13.3" FT /gene="CAPS" FT misc_feature complement(5915391..5915887) FT /gene="CAPS" FT /note="DDS similarity to overlapiing ESTs:~(10142..9722) FT AA470903 ne20h12.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:881831. Score: 807 Identity: 414/422 (98%).~ FT ~(10147..9727) AA642553 nq73a11.s1 NCI_CGAP_Pr22 Homo FT sapiens cDNA clone IMAGE:1157948. Score: 817 Identity: FT 416/420 (99%).~~(10218..9777) AA125808 zl29e12.s1 Soares FT pregnant uterus NbHPU Homo sapiens cDNA clone 503374 FT 3'.~Score: 851 Identity: 435/441 (98%)~~(10219..9803) FT AA483290 ne39b09.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:899705 similar to TR:G191151 G191151 PRO-ALPHA-1 TYPE FT V COLLAGEN. Score: 804 Identity: 412/415 (99%).~~Other EST FT matches:~AA909760" FT misc_feature 5916150..5917207 FT /note="DDS similarity to overlapping ESTs:~(10481..10889) FT AA442847 zv58g04.s1 Soares testis NHT Homo sapiens cDNA FT clone 757878 3'. Score: 818 Identity: 409/409 FT (100%).~~(10481..10925) AA171712 zp24a06.s1 Stratagene FT neuroepithelium (#937231) Homo sapiens cDNA clone 610354 FT 3'. Score: 853 Identity: 442/445 (99%).~~(10482..10959) FT AA126623 zl23e04.s1 Soares pregnant uterus NbHPU Homo FT sapiens cDNA clone 502782 3'.~Score: 873 Identity: 473/487 FT (97%).~~(11173..10672) D60943|HUM141C12B Human fetal brain FT cDNA 5'-end GEN-141C12. Score: 1004 Identity: 502/502 FT (100%).~~(11187..10721) AA307707 EST178722 Colon carcinoma FT (HCC) cell line Homo sapiens cDNA 5' end; Score: 926 FT Identity: 465/467 (99%).~~(11349..10913) AA652407 FT ns57d05.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1187721; Score: 865 Identity: 436/436 FT (100%).~~(11538..11042) AA292751 zt64a02.r1 Soares testis FT NHT Homo sapiens cDNA clone 727082 5'; Score: 957 Identity: FT 489/496 (98%)." FT misc_feature 5917326..5917664 FT /note="DDS similarity to overlapping ESTs:~(11657..11986) FT AA642429 ns27d09.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:1184849; Score: 636 Identity: 329/330 FT (99%).~~(11995..11663) AA160668 zo75b01.s1 Stratagene FT pancreas (#937208) Homo sapiens cDNA clone 592681 3'; FT (332..1); 98% identity.~~(11664..11975) AA573369 nk98h01.s1 FT NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:1028881; FT (1..311); 99% identity.~~Other EST matches:~AA884083, FT AA909171, T15830, T15723" FT CDS complement(join(5917621..5917664,5917805..5917991, FT 5918507..5918649,5921212..5921332,5923205..5923314, FT 5923823..5923925,5924838..5924916,5925645..5925748, FT 5927979..5928098,5931415..5931542,5932463..5932555, FT 5933425..5933490,5941632..>5941670)) FT /codon_start=3 FT /product="F23487_2" FT /note="Hypothetical human protein; Most similar to (U23510) FT R12C12.2 gene product [Caenorhabditis elegans] and FT sp|P40517|YIG3_YEAST HYPOTHETICAL 36.1 KD PROTEIN IN FT RNR3-SNP1 INTERGENIC REGION pir||S48416 hypothetical FT protein YIL063c - yeast (Saccharomyces cerevisiae) FT gi|557806 (Z38060) orf, len: 327, CAI: 0.17, some FT similarity to NUP2_YEAST P32499 NUCLEOPORIN NUP2 FT [Saccharomyces cerevisiae] gi|763283 (Z47047) unknown" FT /protein_id="AAC14485.1" FT /translation="TSSLTQFPPSQSEERSSGFRLKPPTLIHGQAPSAGLPSQKPKEQQ FT RSVLRPAVLQAPQPKALSQTVPSSGTNGVSLPADCTGAVPAASPDTAAWRSPSEAADEV FT CALEEKEPQKNESSNASEEEACEKKDPATQQAFVFGQNLRDRVKLINESVDEADMENAG FT HPSADTPTATNYFLQYISSSLENSTNSADASSNKFVFGQNMSERVLSPPKLNEVSSDAN FT RENAAAESGSESSSQEATPEKESLAESAAAYTKATARKCLLEKVEVITGEEAESNVLQM FT QCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQM FT QIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQEQEAK FT MPAPEPGAAPSNEEDDSDDDDVLAPSGATAAGAGDEGDGQTTGST" FT misc_feature complement(5917805..5917991) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 99.000~~(12232..12316) FT DDS similarity to AA160668 zo75b01.s1 Stratagene pancreas FT (#937208) Homo sapiens cDNA clone 592681 3' (429..333); FT 100% identity.~~~(12133..12187) BLASTN similarity to FT AA884083 (334..388); match: 1, score: 9.7e-148; database FT searched: month.na; am36b10.s1 Soares NFL T GBC S1 Homo FT sapiens cDNA clone IMAGE:1468891 3'" FT repeat_region 5917957..5918006 FT /rpt_family="MER48" FT misc_feature complement(5918507..5918649) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to M79174 EST01322 Homo sapiens cDNA clone FT HHCPO45 (173..314); 98% identity." FT misc_feature complement(5918564..5918652) FT /note="BLASTN similarity to T35873 (201..289); match: 1, FT score: 1.7e-27; database searched: est; EST92886 Homo FT sapiens cDNA 5' end similar to None.." FT repeat_region 5919628..5919930 FT /rpt_family="AluSq" FT repeat_region 5920132..5920411 FT /rpt_family="AluJo" FT repeat_region complement(5920563..5920858) FT /rpt_family="AluSx" FT misc_feature complement(5921212..5921332) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 62.000~~DDS similarity to FT overlapping ESTs:~M79174 EST01322 Homo sapiens cDNA clone FT HHCPO45; (52..172); 99% identity.~~AA573369 nk98h01.s1 FT NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:1028881; FT (312..421); 98% identity." FT repeat_region 5921601..5922244 FT /rpt_family="L1MB7" FT repeat_region 5922669..5922969 FT /rpt_family="AluSx" FT misc_feature complement(5923205..5923314) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 93.000~~DDS similarity FT to overlapping ESTs:~(17536..17586) M79174 EST01322 Homo FT sapiens cDNA clone HHCPO45; (1..51); 100% FT identity.~~(17572..17645) AA286926 zs56e04.r1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:701502 5' (430..502); 98% FT identity.~~Other EST matches:~T35873, T35870" FT misc_feature complement(5923823..5923925) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA286926 zs56e04.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:701502 5' FT (327..429); 100% identity.~~AA419194 zv33g04.r1 Soares FT ovary tumor NbHOT Homo sapiens cDNA clone 755478 5' FT (297..399); 100% identity.~~Other EST matches:~T35873, FT T35870" FT misc_feature complement(5924838..5924916) FT /note="DDS similarity to overlapping ESTs:~AA286926 FT zs56e04.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:701502 5' (248..326); 100% identity.~~AA419194 FT zv33g04.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 755478 5' (218..296); 100% identity.~~(19247..19070) FT predicted exon, program: grail2exons_human_1.3, frame: 1, FT quality: excellent, score: 95.000" FT misc_feature complement(5925645..5925748) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 79.000~~DDS similarity FT to overlapping ESTs:~AA286926 zs56e04.r1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone IMAGE:701502 5' (144..247); 100% FT identity.~~AA419194 zv33g04.r1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 755478 5' (114..217); 100% FT identity." FT repeat_region complement(5926122..5926266) FT /rpt_family="MIR" FT repeat_region 5926276..5926578 FT /rpt_family="AluSx" FT repeat_region complement(5926945..5927103) FT /rpt_family="MER20" FT repeat_region 5927410..5927606 FT /rpt_family="MER20" FT misc_feature complement(5927979..5928098) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 75.000~~DDS similarity FT to overlapping ESTs:~AA286926 zs56e04.r1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone IMAGE:701502 5' (24..143); 100% FT identity.~~AA419194 zv33g04.r1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 755478 5' (1..113); 98% FT identity.~~R24319 yg32e03.r1 Homo sapiens cDNA clone 33881 FT 5' (325..445); 95% identity." FT repeat_region 5928206..5928345 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(5928588..5928633) FT /rpt_family="(CA)n" FT repeat_region complement(5930587..5930879) FT /rpt_family="AluJb" FT misc_feature complement(5931415..5931542) FT /note="DDS similarity to overlapping ESTs:~R24319 FT yg32e03.r1 Homo sapiens cDNA clone 33881 5' (198..324); 99% FT identity.~~AA041393 zf09h03.s1 Soares fetal heart NbHH19W FT Homo sapiens cDNA clone 376469 3' similar to gb:M10119 FT FERRITIN LIGHT CHAIN (HUMAN); (275..164); 100% FT identity.~~(25768..25746) AA286926 zs56e04.r1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:701502 5' (1..23); 96% FT identity." FT repeat_region 5931725..5931759 FT /rpt_family="POLY_A" FT repeat_region 5931763..5932065 FT /rpt_family="AluJo" FT misc_feature complement(5932463..5932555) FT /note="DDS similarity to overlapping ESTs:~R24319 FT yg32e03.r1 Homo sapiens cDNA clone 33881 5' (106..197); 92% FT identity.~~AA041393 zf09h03.s1 Soares fetal heart NbHH19W FT Homo sapiens cDNA clone 376469 3' similar to gb:M10119 FT FERRITIN LIGHT CHAIN (HUMAN); (367..276); 92% FT identity.~~(26886..26705) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 90.000" FT misc_feature complement(5933425..5933490) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 65.000~~DDS similarity to FT overlapping ESTs:~R24319 yg32e03.r1 Homo sapiens cDNA clone FT 33881 5' (40..105); 100% identity.~~(27816..27756) AA041393 FT zf09h03.s1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 376469 3' similar to gb:M10119 FERRITIN LIGHT CHAIN FT (HUMAN); (429..368); 99% identity." FT repeat_region 5934393..5934558 FT /rpt_family="L1" FT repeat_region 5934563..5934859 FT /rpt_family="AluJo" FT repeat_region 5934908..5935121 FT /rpt_family="L1MB7" FT repeat_region 5936484..5936909 FT /rpt_family="L1MC4" FT repeat_region 5936930..5937086 FT /rpt_family="AluSg/x" FT repeat_region 5937146..5937290 FT /rpt_family="L1MC4" FT repeat_region 5937336..5937491 FT /rpt_family="L1MC4" FT repeat_region 5938419..5938718 FT /rpt_family="AluSq" FT repeat_region 5938914..5939209 FT /rpt_family="AluSq" FT misc_feature complement(5939522..5939593) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 58.000" FT repeat_region complement(5941169..5941211) FT /rpt_family="(CA)n" FT misc_feature complement(5941632..5941670) FT /note="DDS similarity to R24319 yg32e03.r1 Homo sapiens FT cDNA clone 33881 5' (1..39); 100% identity." FT repeat_region 5942506..5942731 FT /rpt_family="AluSg/x" FT repeat_region 5942749..5943045 FT /rpt_family="AluJo" FT repeat_region 5943401..5943463 FT /rpt_family="MER58A" FT repeat_region 5943466..5943526 FT /rpt_family="MER58B" FT repeat_region 5943998..5944074 FT /rpt_family="MIR" FT repeat_region complement(5945327..5945728) FT /rpt_family="L1" FT misc_feature 5946684..5946795 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 68.000" FT repeat_region 5947043..5947343 FT /rpt_family="AluSx" FT repeat_region 5947346..5947382 FT /rpt_family="(GAAA)n" FT misc_feature 5947481..5947618 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 87.000" FT repeat_region 5948180..5948241 FT /rpt_family="Alu" FT repeat_region 5955701..5955816 FT /rpt_family="MER58B" FT repeat_region 5955843..5956136 FT /rpt_family="AluJo" FT repeat_region complement(5957533..5957607) FT /rpt_family="(GGGA)n" FT misc_feature complement(5957736..5957853) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 95.000" FT misc_feature complement(5957929..5957984) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature complement(5959008..5959059) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 53.000" FT repeat_region 5960422..5960604 FT /rpt_family="LINE2" FT repeat_region 5961173..5961440 FT /rpt_family="AluY" FT repeat_region 5961462..5961763 FT /rpt_family="AluSp" FT repeat_region 5962400..5962521 FT /rpt_family="LINE2" FT repeat_region complement(5962559..5962595) FT /rpt_family="MLT2G" FT misc_feature 5962700..5962992 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 51.000" FT repeat_region 5963287..5963581 FT /rpt_family="AluJo" FT misc_feature 5963655..5963700 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 89.000" FT misc_feature 5963862..5964260 FT /note="BLASTN similarity to AQ190228 (3..401); match: 0.97, FT score: 4.6e-155; database searched: month.na; FT HS_3221_A2_A02_MR CIT Approved Human Genomic Sperm Library FT D Homo sapiens genomic clone Plate=3221 Col=4 Row=A," FT misc_feature 5963873..5963933 FT /note="BLASTN similarity to AQ181880 (24..84); match: 1, FT score: 1.5e-186; database searched: month.na; FT HS_3214_B2_F05_T7 CIT Approved Human Genomic Sperm Library FT D Homo sapiens genomic clone Plate=3214 Col=10 Row=L," FT misc_feature 5963934..5964356 FT /note="BLASTN similarity to AQ181880 (86..508); match: FT 0.99, score: 1.5e-186; database searched: month.na; FT HS_3214_B2_F05_T7 CIT Approved Human Genomic Sperm Library FT D Homo sapiens genomic clone Plate=3214 Col=10 Row=L," FT misc_feature 5964257..5964278 FT /note="BLASTN similarity to AQ190228 (397..418); match: FT 0.95, score: 4.6e-155; database searched: month.na; FT HS_3221_A2_A02_MR CIT Approved Human Genomic Sperm Library FT D Homo sapiens genomic clone Plate=3221 Col=4 Row=A," FT repeat_region complement(5965870..5965983) FT /rpt_family="MIR" FT repeat_region 5967750..5968046 FT /rpt_family="AluSx" FT repeat_region 5968286..5968485 FT /rpt_family="MIR" FT misc_feature complement(5969715..5969818) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 93.000" FT repeat_region 5970002..5970224 FT /rpt_family="MER20" FT misc_feature complement(5970015..5970064) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 72.000" FT repeat_region 5970466..5970681 FT /rpt_family="MER20" FT misc_feature complement(5970753..5970883) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 50.000" FT repeat_region 5971053..5971342 FT /rpt_family="MER64B" FT repeat_region complement(5971347..5971473) FT /rpt_family="FLAM_A" FT repeat_region 5971490..5971687 FT /rpt_family="MER64B" FT repeat_region 5972146..5972315 FT /rpt_family="MER5B" FT misc_feature complement(5972355..5972480) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 82.000" FT repeat_region 5973355..5973576 FT /rpt_family="MER20" FT repeat_region complement(5973775..5973995) FT /rpt_family="MIR" FT repeat_region 5974059..5974250 FT /rpt_family="MER20" FT repeat_region 5974493..5974537 FT /rpt_family="L1" FT repeat_region 5974726..5974903 FT /rpt_family="MER5B" FT misc_feature complement(5975371..5975517) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 63.000" FT repeat_region complement(5975524..5975979) FT /rpt_family="LINE2" FT repeat_region complement(5976036..5976359) FT /rpt_family="LINE2" FT repeat_region 5976476..5976773 FT /rpt_family="AluSc" FT repeat_region 5976886..5977018 FT /rpt_family="MIR" FT repeat_region 5978958..5979179 FT /rpt_family="LINE2" FT repeat_region 5979183..5979458 FT /rpt_family="AluJo" FT repeat_region complement(5979459..5979567) FT /rpt_family="(TA)n" FT repeat_region 5979694..5979800 FT /rpt_family="LINE2" FT repeat_region complement(5979922..5979968) FT /rpt_family="(GGGA)n" FT repeat_region complement(5979970..5980261) FT /rpt_family="AluSx" FT repeat_region complement(5980268..5980531) FT /rpt_family="MER58B" FT repeat_region 5980579..5980683 FT /rpt_family="MER63C" FT repeat_region 5980661..5980854 FT /rpt_family="MER63C" FT repeat_region complement(5980865..5981166) FT /rpt_family="AluSx" FT repeat_region 5981201..5981498 FT /rpt_family="AluSg" FT repeat_region 5981511..5981576 FT /rpt_family="MER5A" FT repeat_region 5981578..5981877 FT /rpt_family="AluSx" FT repeat_region 5981888..5982171 FT /rpt_family="AluJo" FT repeat_region 5982188..5982478 FT /rpt_family="AluSx" FT repeat_region complement(5982667..5982967) FT /rpt_family="AluYa5" FT repeat_region 5983574..5984056 FT /rpt_family="MLT1G" FT repeat_region complement(5984102..5984217) FT /rpt_family="LINE2" FT repeat_region complement(5984256..5984556) FT /rpt_family="AluSx" FT misc_feature 6429090..6429580 FT /note="NOTE: Parent cosmid and plasmid subclones unstable FT in dinucleotide repeat region 14620-15110. Unresolved FT number of dinucleotide repeat subunits 14620-15110. False FT join 14925." FT misc_feature complement(7019231..7061671) FT /note="NOTE: Large tandem repeat 63500-105940. There are FT possibly more repeat copies than are represented in this FT assembly. This clone overlaps AC025278 in the tandem repeat FT region." FT gap 7346005..7396004 FT /estimated_length=50000 FT misc_feature 7756375..7757252 FT /note="NOTE: Break in plasmid subclone coverage FT 122300-123191. Unresolved tandem repeat 122800-123177. FT Unresolved number of repeat copies 122800-123177." FT misc_feature 8230706..8230847 FT /note="NOTE: Unresolved number of dinucleotide repeat FT copies 107600-107741. Forced join 107616." FT misc_feature 8336885..8366562 FT /note="NOTE: Large tandem repeat 22153-51830. There are FT possibly more repeat copies than are represented in this FT assembly." FT misc_feature 8410852..8411002 FT /note="NOTE: Transposon sequencing failed to verify number FT of repeat copies 96120-96270. Unstable in BAC and subclone FT templates. Unsure number of repeat copies 96120-96270." FT gap 8687199..8737198 FT /estimated_length=50000 FT misc_feature complement(8851461..8897580) FT /note="NOTE: Large tandem repeat 28600-74719. There are FT more repeat copies than are represented in this assembly. FT Forced joins at 36565 and 47113." FT repeat_region complement(9336858..9337443) FT /rpt_family="LTR10C" FT repeat_region complement(9337572..9337907) FT /rpt_family="L1PA13" FT repeat_region complement(9337908..9338200) FT /rpt_family="AluSc" FT repeat_region complement(9338203..9338426) FT /rpt_family="L1PA7" FT repeat_region complement(9338428..9338728) FT /rpt_family="AluYa5" FT repeat_region complement(9338731..9338893) FT /rpt_family="L1PA7" FT repeat_region 9339406..9339766 FT /rpt_family="L1MA10" FT repeat_region 9339925..9340229 FT /rpt_family="AluSx" FT repeat_region complement(9340723..9341020) FT /rpt_family="AluSp" FT repeat_region complement(9341604..9341898) FT /rpt_family="AluSx" FT repeat_region 9341976..9342275 FT /rpt_family="AluSc" FT repeat_region 9342646..9342933 FT /rpt_family="LTR9" FT repeat_region 9342934..9343234 FT /rpt_family="AluSq" FT repeat_region 9343239..9343514 FT /rpt_family="LTR9" FT repeat_region complement(9344578..9344877) FT /rpt_family="AluSg" FT repeat_region 9345139..9345396 FT /rpt_family="L1MA4A" FT misc_feature 9345820..9346725 FT /note="BLASTX similarity to PID (1..302); match: 0.67, FT score: 1.6e-140; database searched: nr; (Y10530) olfactory FT receptor [Homo sapiens] gi|3290000 (AC005255) BC85395_2 FT [Homo sapiens]" FT misc_feature 9345875..9346758 FT /note="BLASTX similarity to P34987 (1..294); match: 0.77, FT score: 1.8e-138; database searched: nr; GUSTATORY RECEPTOR FT GUST27 pir||A46750 olfactory receptor homolog - rat FT >gnl|PID|d1002747 (D12820) GUST27 protein [Rattus" FT repeat_region 9346907..9347202 FT /rpt_family="AluSc" FT repeat_region complement(9347213..9347291) FT /rpt_family="MADE1" FT repeat_region complement(9347584..9347670) FT /rpt_family="MIR" FT repeat_region complement(9347844..9347959) FT /rpt_family="(GGAA)n" FT repeat_region complement(9347985..9348290) FT /rpt_family="AluY" FT repeat_region complement(9348321..9348651) FT /rpt_family="L1MB5" FT repeat_region 9348672..9348978 FT /rpt_family="AluSx" FT repeat_region complement(9348987..9349246) FT /rpt_family="L1MB5" FT repeat_region complement(9349241..9349838) FT /rpt_family="L1MA8" FT repeat_region complement(9349851..9350146) FT /rpt_family="AluY" FT repeat_region complement(9350157..9350344) FT /rpt_family="L1MA8" FT repeat_region complement(9350384..9350681) FT /rpt_family="AluSx" FT repeat_region complement(9350707..9350847) FT /rpt_family="FLAM_C" FT repeat_region complement(9350862..9351287) FT /rpt_family="L1MA8" FT repeat_region complement(9351318..9351481) FT /rpt_family="L1MA8" FT repeat_region complement(9351492..9351791) FT /rpt_family="AluSx" FT repeat_region 9352160..9352458 FT /rpt_family="AluSx" FT repeat_region complement(9352924..9353225) FT /rpt_family="AluSx" FT repeat_region complement(9353486..9353630) FT /rpt_family="(GGAA)n" FT misc_feature complement(9353919..9353973) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 88.000" FT repeat_region complement(9354021..9354170) FT /rpt_family="FRAM" FT repeat_region complement(9354172..9354262) FT /rpt_family="SVA" FT repeat_region 9354929..9355324 FT /rpt_family="L1MB3" FT repeat_region 9355329..9355596 FT /rpt_family="L1MB3" FT repeat_region 9355598..9355908 FT /rpt_family="AluSx" FT repeat_region 9355910..9356282 FT /rpt_family="L1MB3" FT repeat_region complement(9356744..9357043) FT /rpt_family="AluSg" FT repeat_region complement(9357143..9357191) FT /rpt_family="(CA)n" FT repeat_region 9357227..9357698 FT /rpt_family="L1MB3" FT repeat_region 9357753..9357813 FT /rpt_family="(TAAA)n" FT repeat_region complement(9358378..9358748) FT /rpt_family="L1M4" FT repeat_region complement(9358912..9359126) FT /rpt_family="MIR" FT repeat_region 9360347..9360656 FT /rpt_family="AluSx" FT repeat_region complement(9360790..9361069) FT /rpt_family="AluJo" FT mRNA 9361945..9362842 FT /product="H.sapiens mRNA for putative olfactory receptor FT (clone ht2)" FT CDS 9361948..9362739 FT /codon_start=1 FT /product="BC319430_5" FT /note="Identical to (Y10529) olfactory receptor [Homo FT sapiens]" FT /protein_id="AAD03353.1" FT /translation="MYFFLSNLSLADIGFTSTTVPKMIVDMQTHSRVISYEGCLTQMSF FT FVLFACMDDMLLSVMAYDRFVAICHPLHYRIIMNPRLCGFLILLSFFISLLDSQLHNLI FT MLQLTCFKDVDISNFFCDPSQLLHLRCSDTFINEMVIYFMGAIFGCLPISGILFSYYKI FT VSPILRVPTSDGKYKAFSTCGSHLAVVCLFYGTGLVGYLSSAVLPSPRKSMVASVMYTV FT VTPMLNPFIYSLRNKDIQSALCRLHGRIIKSHHLHPFCYMG" FT repeat_region complement(9363011..9363065) FT /rpt_family="MER6" FT repeat_region 9363137..9363213 FT /rpt_family="MER6" FT repeat_region complement(9363316..9363411) FT /rpt_family="MER5B" FT repeat_region 9363578..9363878 FT /rpt_family="AluSx" FT repeat_region 9363879..9363910 FT /rpt_family="(GAAA)n" FT repeat_region 9364112..9364456 FT /rpt_family="L1MA3" FT repeat_region complement(9364457..9364742) FT /rpt_family="AluSq" FT repeat_region 9364743..9364918 FT /rpt_family="L1MA4A" FT repeat_region 9365019..9365266 FT /rpt_family="AluSc" FT repeat_region complement(9365338..9365638) FT /rpt_family="AluY" FT repeat_region 9365639..9365984 FT /rpt_family="MER57B" FT repeat_region 9365985..9366298 FT /rpt_family="AluSx" FT repeat_region 9366398..9366496 FT /rpt_family="AluS" FT repeat_region 9370003..9371222 FT /rpt_family="pTR5" FT repeat_region complement(9371287..9371588) FT /rpt_family="AluY" FT mRNA complement(9371730..9372201) FT /product="H.sapiens mRNA for TPCR26 protein" FT /note="Note: Sequence discrepancies between the highly FT redundant sequence at this genomic locus and the seqeunce FT from PCR fragment X89673 (TPCR26) suggests that this locus FT is a pseudogene in the individual from which this genomic FT accession is derived." FT repeat_region complement(9372627..9373032) FT /rpt_family="MLT1F" FT repeat_region complement(9373109..9373403) FT /rpt_family="AluSg" FT repeat_region complement(9373634..9373934) FT /rpt_family="AluSx" FT repeat_region 9374131..9374435 FT /rpt_family="AluSx" FT repeat_region complement(9374646..9374809) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(9374813..9375099) FT /rpt_family="AluSx" FT repeat_region 9375362..9375653 FT /rpt_family="AluSg1" FT CDS complement(9376066..9376668) FT /codon_start=1 FT /product="BC319430_7" FT /note="Hypothetical olfactory receptor protein; Product of FT TPCR110 mRNA extended by homology to (Y10529) olfactory FT receptor [Homo sapiens]" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD03354.1" FT /translation="MNDMVLTVMAYDQFVAICHPLRYPVIMNPHLCVFLVLVSFILSLL FT NSQLHNQIVLQFTCFKNVEIFNFFCEPSQLLNLACSDSVINNIFMYLDSVIFGFLPISG FT ILLSYYKIVSSILRIPSSDGKYKAFSTCGSHLAVVCLFYGTGLGAYLSSAASSFPRKGA FT VTSVMYTVVIPMLNPFIYSLRNRDIKSALWRLHSRTV" FT mRNA complement(9376150..9376621) FT /product="H.sapiens mRNA for TPCR110 protein" FT repeat_region 9379135..9379176 FT /rpt_family="(CAT)n" FT repeat_region complement(9379883..9379903) FT /rpt_family="AT_rich" FT repeat_region complement(9379963..9380044) FT /rpt_family="L1MB4" FT repeat_region complement(9380070..9380148) FT /rpt_family="AluS" FT repeat_region complement(9380150..9380210) FT /rpt_family="L1M" FT repeat_region complement(9380271..9380304) FT /rpt_family="AT_rich" FT repeat_region complement(9380964..9381072) FT /rpt_family="MER7B" FT repeat_region complement(9381097..9382155) FT /rpt_family="MER52" FT repeat_region complement(9382146..9382222) FT /rpt_family="MER52" FT repeat_region complement(9382238..9382423) FT /rpt_family="MER7B" FT repeat_region complement(9382443..9382833) FT /rpt_family="L1PA5" FT repeat_region complement(9382841..9383039) FT /rpt_family="MER7B" FT repeat_region complement(9383063..9383189) FT /rpt_family="FLAM_C" FT repeat_region complement(9383192..9383765) FT /rpt_family="MER7B" FT repeat_region complement(9383817..9384119) FT /rpt_family="AluSc" FT repeat_region complement(9384395..9384465) FT /rpt_family="MER31" FT repeat_region 9384489..9384787 FT /rpt_family="AluSc" FT repeat_region complement(9384795..9384827) FT /rpt_family="MER31" FT repeat_region complement(9384911..9385063) FT /rpt_family="MER67B" FT repeat_region complement(9384954..9385070) FT /rpt_family="MER67C" FT repeat_region 9385076..9385372 FT /rpt_family="AluJo" FT repeat_region complement(9385383..9385467) FT /rpt_family="MER67C" FT repeat_region complement(9385403..9385486) FT /rpt_family="MER67B" FT repeat_region complement(9385650..9385719) FT /rpt_family="AluSx" FT repeat_region complement(9385809..9386036) FT /rpt_family="AluSx" FT repeat_region 9386364..9386662 FT /rpt_family="AluSc" FT misc_feature 9386928..9387290 FT /note="BLASTN similarity to T41069 (1..363); match: 0.99, FT score: 3.5e-146; database searched: est; ya30a11.s2 Homo FT sapiens cDNA clone 62108 3'. >gb|G06822|G06822 human STS FT WI-8049." FT misc_feature 9387016..9387318 FT /note="BLASTN similarity to T50111 (1..307); match: 0.96, FT score: 9.9e-104; database searched: est; yb77c03.s1 Homo FT sapiens cDNA clone 77188 3'." FT repeat_region complement(9387471..9387772) FT /rpt_family="AluSp" FT repeat_region complement(9387773..9388031) FT /rpt_family="AluSc" FT repeat_region 9388233..9388321 FT /rpt_family="LINE2" FT repeat_region complement(9388682..9388807) FT /rpt_family="AluJb" FT repeat_region complement(9388820..9389051) FT /rpt_family="AluJo" FT misc_feature complement(9389081..9390045) FT /note="Olfactory receptor [Homo sapiens], pseudogene. Most FT similar to hypothetical olfactory receptor encoded by FT (AC005255) BC85395_1 [Homo sapiens]." FT repeat_region 9390521..9390649 FT /rpt_family="(GGAA)n" FT repeat_region complement(9390930..9391257) FT /rpt_family="AluSx" FT repeat_region complement(9393150..9394704) FT /rpt_family="pTR5" FT repeat_region complement(9395129..9395419) FT /rpt_family="AluSx" FT repeat_region complement(9395497..9395671) FT /rpt_family="MER5A" FT repeat_region complement(9395822..9396053) FT /rpt_family="AluJb" FT repeat_region 9396157..9396448 FT /rpt_family="AluSg" FT repeat_region 9396458..9396515 FT /rpt_family="AT_rich" FT repeat_region complement(9396516..9396810) FT /rpt_family="AluJb" FT repeat_region complement(9396821..9396864) FT /rpt_family="L1MB4" FT repeat_region 9396887..9397191 FT /rpt_family="AluSx" FT repeat_region complement(9397196..9397468) FT /rpt_family="L1MB4" FT repeat_region complement(9397478..9397611) FT /rpt_family="AluJo" FT repeat_region complement(9397619..9398037) FT /rpt_family="L1" FT repeat_region complement(9398045..9398161) FT /rpt_family="L1MA7" FT repeat_region 9398165..9398412 FT /rpt_family="L1PB1" FT repeat_region 9398420..9398649 FT /rpt_family="L1MA7" FT repeat_region 9398651..9398934 FT /rpt_family="AluJo" FT repeat_region 9399138..9399333 FT /rpt_family="AluSg/x" FT repeat_region 9399340..9399603 FT /rpt_family="AluSc" FT repeat_region 9399604..9399631 FT /rpt_family="AT_rich" FT misc_feature 9714278..9714818 FT /note="NOTE: Shatter libraries failed to verify FT dinucleotide repeat 56340-56880. Unsure number of repeat FT copies. Forced join 56433." FT mRNA complement(join(<10252704..10252896,10254442..10254663, FT 10257027..10257200,10259560..10259693,10260129..10260333, FT 10260529..10260644,10262074..10262221,10262426..10262523, FT 10264969..10265155,10265262..10265449,10265581..10265732, FT 10266529..10266621,10267067..10267185,10270334..10270443, FT 10270518..10270598,10270694..10270739,10271060..10271094, FT 10273343..10273424,10274002..10274036,10277274..10277361, FT 10279006..10279040,10283766..10283850,10284547..10284581, FT 10286216..10286294,10287968..10288043,10291026..10291245, FT 10291454..10291561,10292717..>10292753)) FT /product="Homo sapiens DNA (cytosine-5-)-methyltransferase FT 1 (DNMT1) mRNA" FT CDS complement(join(<10252704..10252896,10254442..10254663, FT 10257027..10257200,10259560..10259693,10260129..10260333, FT 10260529..10260644,10262074..10262221,10262426..10262523, FT 10264969..10265155,10265262..10265449,10265581..10265732, FT 10266529..10266621,10267067..10267185,10270334..10270443, FT 10270518..10270598,10270694..10270739,10271060..10271094, FT 10273343..10273424,10274002..10274036,10277274..10277361, FT 10279006..10279040,10283766..10283850,10284547..10284581, FT 10286216..10286294,10287968..10288043,10291026..10291107)) FT /codon_start=1 FT /gene="DNMT" FT /product="MTDM_HUMAN [AA 1-966]" FT /function="METHYLATES CG RESIDUES" FT /EC_number="2.1.1.37" FT /note="DNA (CYTOSINE-5)-METHYLTRANSFERASE; DNA FT METHYLTRANSFERASE; DNA METASE; MCMT; M.HSAI" FT /protein_id="AAD54507.1" FT /translation="MADANSPPKPLSKPRTPRRSKSDGEAKPEPSPSPRITRKSTRQTT FT ITSHFAKGPAKRKPQEESERAKSDESIKEEDKDQDEKRRRVTSRERVARPLPAEEPERA FT KSGTRTEKEEERDEKEEKRLRSQTKEPTPKQKLKEEPDREARAGVQADEDEDGDEKDEK FT KHRSQPKDLAAKRRPEEKEPEKVNPQISDEKDEDEKEEKRRKTTPKEPTEKKMARAKTV FT MNSKTHPPKCIQCGQYLDDPDLKYGQHPPDAVDEPQMLTNEKLSIFDANESGFESYEAL FT PQHKLTCFSVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPI FT NEWWITGFDGGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNS FT DSTYEDLINKIETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGDSDEQPIFLTP FT CMRDLIKLAGVTLGQRRAQARRQTIRHSTREKDRGPTKATTTKLVYQIFDTFFAEQIEK FT DDREDKENAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMK FT EADDDEEVDDNIPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAET FT LEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVLGATSDPLELF FT LVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMDPESLLEGDDGKTYFYQLWYDQDYA FT RFESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILY FT RVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYR FT IGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVV FT DFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLE" FT repeat_region complement(10253900..10254200) FT /rpt_family="AluJo" FT repeat_region 10254804..10255101 FT /rpt_family="AluSg" FT repeat_region complement(10255428..10255650) FT /rpt_family="AluSg/x" FT repeat_region 10255676..10255745 FT /rpt_family="MLT1I" FT repeat_region complement(10256301..10256420) FT /rpt_family="MIR" FT repeat_region complement(10256498..10256806) FT /rpt_family="AluSx" FT repeat_region 10257653..10257938 FT /rpt_family="AluJo" FT repeat_region 10257940..10257972 FT /rpt_family="(TAAA)n" FT repeat_region 10258005..10258312 FT /rpt_family="AluSq" FT repeat_region 10258509..10258823 FT /rpt_family="AluSp" FT repeat_region 10258824..10258851 FT /rpt_family="AT_rich" FT repeat_region 10258891..10259201 FT /rpt_family="AluY" FT repeat_region 10259718..10260028 FT /rpt_family="AluSq" FT repeat_region 10260926..10261147 FT /rpt_family="L2" FT repeat_region 10261487..10261794 FT /rpt_family="AluSx" FT repeat_region 10262554..10262865 FT /rpt_family="AluSq" FT repeat_region 10262939..10262963 FT /rpt_family="AT_rich" FT repeat_region 10263019..10263154 FT /rpt_family="AluJo" FT repeat_region 10263155..10263434 FT /rpt_family="AluJo" FT repeat_region 10263435..10263464 FT /rpt_family="(CAA)n" FT repeat_region 10263494..10263626 FT /rpt_family="FLAM_C" FT repeat_region 10264028..10264335 FT /rpt_family="AluSx" FT repeat_region complement(10266014..10266318) FT /rpt_family="AluSx" FT repeat_region 10266842..10266893 FT /rpt_family="(TA)n" FT repeat_region complement(10266894..10267021) FT /rpt_family="FLAM_C" FT repeat_region complement(10267295..10267592) FT /rpt_family="AluSx" FT repeat_region complement(10267747..10267974) FT /rpt_family="L1MB6" FT misc_feature complement(10268969..10269003) FT /gene="DNMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 83.000" FT repeat_region complement(10269907..10270184) FT /rpt_family="AluSx" FT repeat_region 10271289..10271586 FT /rpt_family="AluSx" FT repeat_region 10271701..10271982 FT /rpt_family="AluSc" FT repeat_region 10271983..10272040 FT /rpt_family="(TAAA)n" FT repeat_region 10272043..10272328 FT /rpt_family="AluJo" FT repeat_region 10272370..10272518 FT /rpt_family="MLT1B" FT repeat_region complement(10272519..10272816) FT /rpt_family="AluSx" FT repeat_region complement(10272818..10272979) FT /rpt_family="AluSg/x" FT repeat_region complement(10272980..10273245) FT /rpt_family="AluSx" FT repeat_region 10273258..10273313 FT /rpt_family="FLAM_A" FT repeat_region complement(10273641..10273942) FT /rpt_family="AluSq" FT misc_feature 10274138..10274327 FT /note="BLASTN similarity to D00835 (1..190); match: 0.94, FT score: 1.9e-110; database searched: nt; Human FT immunodeficiency virus type 2 proviral DNA, complete FT genome" FT repeat_region complement(10274268..10274436) FT /rpt_family="MER58A" FT misc_feature 10274323..10275203 FT /note="BLASTN similarity to D00835 (10563..11443); match: FT 1, score: 1.9e-110; database searched: nt; Human FT immunodeficiency virus type 2 proviral DNA, complete FT genome" FT repeat_region 10274438..10274564 FT /rpt_family="AluJo" FT repeat_region complement(10274853..10275118) FT /rpt_family="AluSq" FT repeat_region 10275119..10275292 FT /rpt_family="AluJo" FT repeat_region 10275293..10275321 FT /rpt_family="(CAAA)n" FT repeat_region 10275323..10275619 FT /rpt_family="AluSx" FT repeat_region 10275620..10275640 FT /rpt_family="AluJo" FT repeat_region 10275661..10275946 FT /rpt_family="AluJb" FT repeat_region complement(10276077..10276368) FT /rpt_family="AluSx" FT misc_feature 10277403..10277605 FT /note="BLASTN similarity to D00835 (10837..11039); match: FT 1, score: 5.0e-75; database searched: nt; Human FT immunodeficiency virus type 2 proviral DNA, complete FT genome" FT repeat_region complement(10277862..10278172) FT /rpt_family="AluSx" FT repeat_region 10278536..10278799 FT /rpt_family="AluSg" FT repeat_region 10278800..10278828 FT /rpt_family="(TTAAA)n" FT repeat_region 10279174..10279253 FT /rpt_family="AluJ/FLAM" FT misc_feature complement(10279259..10279508) FT /note="BLASTN similarity to AQ750248.1 (227..476); match: FT 1, score: 4.3e-97; database searched: month.na; FT HS_5576_A2_E09_SP6 RPCI-11 Human Male BAC Library Homo FT sapiens genomic clone Plate=1152 Col=18 Row=I, genomic FT survey" FT repeat_region complement(10279511..10279805) FT /rpt_family="AluSx" FT repeat_region 10279937..10280236 FT /rpt_family="AluY" FT repeat_region 10280237..10280262 FT /rpt_family="(TAAA)n" FT repeat_region 10280263..10280292 FT /rpt_family="AluY" FT repeat_region 10280293..10280459 FT /rpt_family="AluY" FT repeat_region 10280680..10280989 FT /rpt_family="AluSq" FT repeat_region 10281033..10281336 FT /rpt_family="AluSq" FT repeat_region 10281448..10281487 FT /rpt_family="(TTTG)n" FT repeat_region complement(10281496..10281783) FT /rpt_family="AluJo" FT repeat_region 10282067..10282199 FT /rpt_family="AluSx" FT repeat_region 10282200..10282480 FT /rpt_family="AluY" FT repeat_region 10282481..10282523 FT /rpt_family="(TAAA)n" FT repeat_region 10282534..10282694 FT /rpt_family="AluSx" FT repeat_region 10282695..10282715 FT /rpt_family="AT_rich" FT repeat_region 10282810..10283100 FT /rpt_family="AluSp" FT repeat_region 10283220..10283507 FT /rpt_family="AluSx" FT repeat_region 10283509..10283528 FT /rpt_family="(TAAAA)n" FT misc_feature 10283539..10283676 FT /gene="DNMT" FT /note="BLASTN similarity to T41409 (15..152); match: 0.96, FT score: 8.4e-47; database searched: est; ph3a11_19/1TV Homo FT sapiens cDNA clone ph3a11_19/1TV." FT misc_feature complement(10283577..10283697) FT /gene="DNMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 56.000" FT misc_feature complement(10283762..10283850) FT /gene="DNMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 92.000" FT repeat_region complement(10284155..10284467) FT /rpt_family="AluSx" FT repeat_region 10284892..10285089 FT /rpt_family="AluJb" FT repeat_region 10285090..10285112 FT /rpt_family="(GAAAA)n" FT repeat_region 10285122..10285389 FT /rpt_family="AluSx" FT repeat_region 10285395..10285423 FT /rpt_family="(CAA)n" FT repeat_region 10285427..10285740 FT /rpt_family="AluSq" FT repeat_region 10285749..10285805 FT /rpt_family="(CA)n" FT repeat_region 10285828..10285960 FT /rpt_family="MLT2FB" FT repeat_region 10286009..10286066 FT /rpt_family="(TA)n" FT repeat_region 10286067..10286108 FT /rpt_family="MLT2FB" FT misc_feature complement(10286216..10286294) FT /gene="DNMT" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 97.000" FT repeat_region 10286423..10286561 FT /rpt_family="L1MC5" FT repeat_region 10286562..10286878 FT /rpt_family="AluSx" FT repeat_region 10286879..10287251 FT /rpt_family="L1MC5" FT repeat_region 10287252..10287541 FT /rpt_family="AluSx" FT repeat_region 10287542..10287785 FT /rpt_family="L1MC5" FT repeat_region 10288325..10288638 FT /rpt_family="AluSx" FT repeat_region 10288654..10288949 FT /rpt_family="AluSc" FT repeat_region 10288951..10289109 FT /rpt_family="AluSx" FT repeat_region 10289119..10289152 FT /rpt_family="(TAAAA)n" FT repeat_region 10289153..10289418 FT /rpt_family="AluY" FT repeat_region 10289419..10289448 FT /rpt_family="(TAAAA)n" FT repeat_region 10289521..10289826 FT /rpt_family="AluY" FT repeat_region complement(10289998..10290205) FT /rpt_family="AluSq" FT repeat_region 10290384..10290694 FT /rpt_family="AluSx" FT repeat_region 10290708..10291007 FT /rpt_family="AluSx" FT misc_feature complement(10291026..10291245) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 10291323..10291352 FT /rpt_family="(CAT)n" FT misc_feature complement(10291454..10291561) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region 10291840..10292150 FT /rpt_family="AluJb" FT repeat_region 10292227..10292532 FT /rpt_family="AluSg" FT misc_feature complement(10292539..10292834) FT /note="BLASTN similarity to T41374 (18..313); match: 0.99, FT score: 6.7e-117; database searched: est; ph6a5_19/1TV Homo FT sapiens cDNA clone ph6a5_19/1TV." FT repeat_region 10293050..10293229 FT /rpt_family="(TA)n" FT repeat_region 10293275..10293340 FT /rpt_family="(TA)n" FT repeat_region 10293341..10293367 FT /rpt_family="(CAGA)n" FT repeat_region complement(10293369..10293640) FT /rpt_family="AluSx" FT repeat_region 10293641..10293801 FT /rpt_family="(TA)n" FT repeat_region complement(10293802..10294090) FT /rpt_family="AluSp" FT repeat_region 10294091..10294097 FT /rpt_family="(TA)n" FT repeat_region 10294114..10294249 FT /rpt_family="AluJb" FT repeat_region 10294250..10294551 FT /rpt_family="AluSq" FT repeat_region 10294552..10294580 FT /rpt_family="(TAAAA)n" FT repeat_region 10294585..10294734 FT /rpt_family="AluJb" FT repeat_region 10295182..10295348 FT /rpt_family="FLAM_A" FT repeat_region 10295820..10296116 FT /rpt_family="AluY" FT repeat_region 10296221..10296538 FT /rpt_family="AluJb" FT repeat_region 10297233..10297535 FT /rpt_family="AluSp" FT repeat_region 10297998..10298255 FT /rpt_family="AluJo" FT repeat_region 10298265..10298521 FT /rpt_family="AluJo" FT repeat_region 10298537..10298812 FT /rpt_family="AluJo" FT repeat_region 10298936..10298995 FT /rpt_family="AluS" FT misc_feature 10488342 FT /note="NOTE: Shatter libraries failed to resolve FT dinuncleotide repeat region. Forced Join 30132." FT misc_feature 10868923..10869239 FT /note="NOTE: Shatter libraries failed to resolve FT dinucleotide repeat region 31296-31612. Unsure number of FT repeat copies 31296-31612. Forced join 31416." FT mRNA join(<10912961..10913034,10916592..10916643, FT 10922940..10923053,10930656..10930765,10934464..10934575, FT 10935733..10935897,10939712..10939944,10940803..10941054, FT 10941654..10942579) FT /gene="DNM2" FT /product="Homo sapiens dynamin (DNM) mRNA, partial cds" FT /note="Alternatively spliced." FT mRNA join(<10912961..10913034,10916592..10916643, FT 10919245..10919256,10922940..10923053,10930656..10930765, FT 10934464..10934575,10935733..10935897,10939712..10939944, FT 10940803..10941054,10941654..10942579) FT /gene="DNM2" FT /product="Homo sapiens dynamin II (DYN2) mRNA, partial cds" FT CDS join(<10912961..10913034,10916592..10916643, FT 10922940..10923053,10930656..10930765,10934464..10934575, FT 10935733..10935897,10939712..10939944,10940803..10941054, FT 10941654..10941723) FT /codon_start=1 FT /gene="DNM2" FT /product="dynamin II {AA 474-866] [Homo sapiens]" FT /function="motor protein" FT /function="GTP binding" FT /note="cytoskeletal protein; Function: FT microtubule-associated force-producing protein involved in FT producing microtubule bundles and able to bind and FT hydrolyze gtp. most probably involved in vesicular FT trafficking processes, in particular endocytosis" FT /protein_id="AAD23603.1" FT /translation="QILLLIDIEQSYINTNHEDFIGFANAQQRSTQLNKKRAIPNQVIR FT RGWLTINNISLMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMS FT NKHVFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQAENEDGAQE FT NTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHELLAYL FT YSSADQSSLMEESADQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDDTWLQ FT SASSHSPTPQRRPVSSIHPPGRPPAVRGPTPGPPLIPVPVGAAASFSAPPIPSRPGPQS FT VFANSDLFPAPPQIPSRPVRIPPGIPPGVPSRRPPAAPSRPTIIRPAEPSLLD" FT CDS join(<10912961..10913034,10916592..10916643, FT 10919245..10919256,10922940..10923053,10930656..10930765, FT 10934464..10934575,10935733..10935897,10939712..10939944, FT 10940803..10941054,10941654..10941723) FT /codon_start=1 FT /gene="DNM2" FT /product="DYN2_HUMAN [AA 474-870]" FT /function="motor protein" FT /function="GTP binding" FT /note="DYNAMIN 2; Function: microtubule-associated FT force-producing protein involved in producing microtubule FT bundles and able to bind and hydrolyze gtp. most probably FT involved in vesicular trafficking processes, in particular FT endocytosis" FT /protein_id="AAD23604.1" FT /translation="QILLLIDIEQSYINTNHEDFIGFANAQQRSTQLNKKRAIPNQGEI FT LVIRRGWLTINNISLMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEK FT GFMSNKHVFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQAENED FT GAQENTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHEL FT LAYLYSSADQSSLMEESADQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDD FT TWLQSASSHSPTPQRRPVSSIHPPGRPPAVRGPTPGPPLIPVPVGAAASFSAPPIPSRP FT GPQSVFANSDLFPAPPQIPSRPVRIPPGIPPGVPSRRPPAAPSRPTIIRPAEPSLLD" FT repeat_region 10916030..10916293 FT /rpt_family="AluJb" FT repeat_region 10916914..10917134 FT /rpt_family="AluJo" FT repeat_region 10917185..10917487 FT /rpt_family="AluSx" FT repeat_region complement(10917748..10917915) FT /rpt_family="AluSg/x" FT repeat_region complement(10917916..10918215) FT /rpt_family="AluSg1" FT repeat_region complement(10918223..10918499) FT /rpt_family="AluSx" FT repeat_region 10918537..10918838 FT /rpt_family="AluSx" FT repeat_region complement(10919090..10919206) FT /rpt_family="(GAAAA)n" FT repeat_region complement(10920840..10920936) FT /rpt_family="(CAGG)n" FT repeat_region 10923184..10923482 FT /rpt_family="AluSg" FT repeat_region complement(10924048..10924217) FT /rpt_family="L1MA4A" FT repeat_region 10924218..10924521 FT /rpt_family="AluJo" FT repeat_region 10924557..10924856 FT /rpt_family="AluSx" FT repeat_region 10924859..10925153 FT /rpt_family="AluSp" FT repeat_region complement(10925162..10925494) FT /rpt_family="L1MA5" FT repeat_region 10928465..10928516 FT /rpt_family="(CG)n" FT repeat_region complement(10929096..10929193) FT /rpt_family="MIR" FT repeat_region 10929819..10929932 FT /rpt_family="FLAM_C" FT repeat_region 10930045..10930117 FT /rpt_family="MIR" FT repeat_region complement(10930194..10930249) FT /rpt_family="LINE2" FT repeat_region complement(10930420..10930528) FT /rpt_family="LINE2" FT repeat_region complement(10930989..10931541) FT /rpt_family="LINE2" FT repeat_region complement(10932217..10932506) FT /rpt_family="AluSp" FT repeat_region complement(10932860..10933161) FT /rpt_family="AluJo" FT repeat_region complement(10933177..10933474) FT /rpt_family="AluSx" FT repeat_region 10933501..10933795 FT /rpt_family="AluY" FT repeat_region 10933802..10934100 FT /rpt_family="AluSp" FT repeat_region 10934893..10935191 FT /rpt_family="AluSx" FT repeat_region 10935200..10935502 FT /rpt_family="AluJb" FT repeat_region 10935930..10936064 FT /rpt_family="AluSx" FT repeat_region 10936065..10936363 FT /rpt_family="AluSg" FT repeat_region 10936369..10936549 FT /rpt_family="AluSx" FT repeat_region 10936587..10936729 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(10936862..10937014) FT /rpt_family="MIR" FT repeat_region 10937281..10937571 FT /rpt_family="AluJo" FT repeat_region 10937645..10937772 FT /rpt_family="AluJb" FT repeat_region complement(10938078..10938119) FT /rpt_family="AT_rich" FT repeat_region 10938120..10938257 FT /rpt_family="AluJo/FRAM" FT repeat_region 10938266..10938563 FT /rpt_family="AluSc" FT repeat_region 10938680..10938974 FT /rpt_family="AluSx" FT repeat_region 10938982..10939277 FT /rpt_family="AluY" FT repeat_region 10939401..10939606 FT /rpt_family="AluSg/x" FT repeat_region complement(10941175..10941241) FT /rpt_family="MIR" FT repeat_region complement(10941401..10941481) FT /rpt_family="MIR" FT misc_feature complement(10942218..10942573) FT /note="BLASTN similarity to AI369074 (13..368); match: FT 0.99, score: 3.1e-138; database searched: month.na; FT qw29g12.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone FT IMAGE:1992550 3', mRNA sequence [Homo sapiens]" FT misc_feature 10943109..10943465 FT /note="BLASTN similarity to AI400895 (9..365); match: 0.99, FT score: 1.2e-138; database searched: month.na; th30f09.x1 FT NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:2119817 3', FT mRNA sequence [Homo sapiens]" FT mRNA complement(join(10943139..10943889,10945610..10945793, FT 10945932..10946029,10946685..10946954)) FT /product="Human putative T1/ST2 receptor binding protein FT precursor mRNA, cds" FT CDS complement(join(10943671..10943889,10945610..10945793, FT 10945932..10946029,10946685..10946867)) FT /codon_start=1 FT /product="putative T1/ST2 receptor binding protein FT precursor [Homo sapiens]" FT /protein_id="AAD23605.1" FT /translation="MMAAGAALALALWLLMPPVEVGGAGPPPIQDGEFTFLLPAGRKQC FT FYQSAPANASLETEYQVIGGAGLDVDFTLESPQGVLLVSESRKADGVHTVEPTEAGDYK FT LCFDNSFSTISEKLVFFELIFDSLQDDEEVEGWAEAVEPEEMLDVKMEDIKESIETMRT FT RLERSIQMLTLLRAFEARDRNLQEGNLERVNFWSAVNVAVLLLVAVLQVCTLKRFFQDK FT RPVPT" FT repeat_region 10944024..10944110 FT /rpt_family="MIR" FT repeat_region 10944160..10944339 FT /rpt_family="AluJb" FT repeat_region 10944360..10944570 FT /rpt_family="AluJo" FT repeat_region 10944571..10944849 FT /rpt_family="AluSx" FT repeat_region 10944894..10945072 FT /rpt_family="MIR" FT repeat_region complement(10945133..10945456) FT /rpt_family="AluSq" FT repeat_region complement(10946459..10946579) FT /rpt_family="(GGGA)n" FT misc_feature complement(10947359..10947474) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 79.000" FT repeat_region 10947735..10947887 FT /rpt_family="MIR" FT repeat_region complement(10948142..10948177) FT /rpt_family="POLY_A" FT repeat_region complement(10948181..10948482) FT /rpt_family="AluY" FT repeat_region complement(10948486..10948746) FT /rpt_family="AluJo" FT repeat_region complement(10948756..10948804) FT /rpt_family="L1MB5" FT repeat_region 10948805..10949104 FT /rpt_family="AluY" FT repeat_region complement(10949105..10949225) FT /rpt_family="L1MB4" FT repeat_region complement(10949226..10949582) FT /rpt_family="LTR9" FT repeat_region complement(10949589..10949880) FT /rpt_family="AluSg" FT repeat_region complement(10949881..10950169) FT /rpt_family="LTR9" FT repeat_region complement(10950170..10950399) FT /rpt_family="L1MB4" FT repeat_region complement(10950405..10950697) FT /rpt_family="AluJb" FT repeat_region complement(10950698..10950986) FT /rpt_family="L1MB4" FT repeat_region complement(10950999..10951179) FT /rpt_family="AluSx" FT repeat_region complement(10951194..10951492) FT /rpt_family="AluSc" FT repeat_region complement(10951493..10951610) FT /rpt_family="AluSx" FT repeat_region complement(10951615..10951649) FT /rpt_family="(CAAA)n" FT repeat_region complement(10951666..10951801) FT /rpt_family="L1MB4" FT repeat_region 10951877..10952175 FT /rpt_family="AluJo" FT repeat_region 10952187..10952272 FT /rpt_family="AluY" FT repeat_region 10952368..10952518 FT /rpt_family="AluJ" FT repeat_region complement(10952941..10953234) FT /rpt_family="AluY" FT repeat_region 10953253..10953423 FT /rpt_family="AluJ" FT repeat_region 10953561..10953713 FT /rpt_family="MER52" FT repeat_region 10953939..10954071 FT /rpt_family="MER52" FT repeat_region complement(10954410..10954475) FT /rpt_family="LINE2" FT repeat_region 10954513..10954568 FT /rpt_family="AluS" FT repeat_region 10954513..10954800 FT /rpt_family="AluSx" FT repeat_region 10954801..10955097 FT /rpt_family="AluSg" FT repeat_region 10955106..10955241 FT /rpt_family="AluJo/FLAM" FT repeat_region 10955242..10955541 FT /rpt_family="AluY" FT repeat_region 10955549..10955849 FT /rpt_family="AluJb" FT repeat_region 10956274..10956572 FT /rpt_family="AluY" FT repeat_region 10956593..10956867 FT /rpt_family="AluJo" FT repeat_region complement(10956871..10957041) FT /rpt_family="AluY" FT repeat_region complement(10957042..10957066) FT /rpt_family="AT_rich" FT repeat_region 10957146..10957489 FT /rpt_family="L1" FT repeat_region complement(10957537..10957690) FT /rpt_family="LINE2" FT repeat_region complement(10958047..10958344) FT /rpt_family="AluSp" FT repeat_region complement(10958352..10958427) FT /rpt_family="MIR" FT repeat_region 10958587..10958886 FT /rpt_family="AluSc" FT repeat_region complement(10959750..10959856) FT /rpt_family="(GGGA)n" FT repeat_region complement(10959861..10959994) FT /rpt_family="FLAM_C" FT repeat_region 10959998..10960124 FT /rpt_family="LINE2" FT repeat_region 10960126..10960384 FT /rpt_family="AluSg/x" FT repeat_region complement(10960385..10960406) FT /rpt_family="AT_rich" FT repeat_region 10960458..10960754 FT /rpt_family="AluSx" FT misc_feature 10960935..10961243 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 81.000" FT misc_feature 10960981..10961067 FT /note="DDS similarity to AA461913 vf95h04.r1 Soares mouse FT mammary gland NbMMG Mus musculus cDNA clone 851575 5'; FT (1..87); 82% identity." FT misc_feature 10961157..10961243 FT /note="DDS similarity to AA461913 vf95h04.r1 Soares mouse FT mammary gland NbMMG Mus musculus cDNA clone 851575 5'; FT (88..175); 80% identity." FT repeat_region complement(10961569..10961653) FT /rpt_family="MIR" FT repeat_region complement(10961730..10962026) FT /rpt_family="AluSq" FT repeat_region complement(10962027..10962227) FT /rpt_family="AluJo" FT repeat_region 10962228..10962362 FT /rpt_family="AluSx" FT repeat_region 10962363..10962670 FT /rpt_family="AluYb8" FT repeat_region 10962671..10962841 FT /rpt_family="AluSx" FT repeat_region complement(10962842..10962939) FT /rpt_family="AluS" FT repeat_region 10963143..10963180 FT /rpt_family="tRNA-Gln-CAG" FT repeat_region complement(10963182..10963492) FT /rpt_family="LINE2" FT repeat_region 10963605..10963737 FT /rpt_family="AluJo/FLAM" FT repeat_region complement(10963739..10963954) FT /rpt_family="AluJo" FT repeat_region complement(10963955..10964025) FT /rpt_family="AluSg/x" FT repeat_region complement(10964026..10964260) FT /rpt_family="AluSx" FT repeat_region complement(10964270..10964570) FT /rpt_family="AluY" FT repeat_region complement(10964576..10964599) FT /rpt_family="AT_rich" FT repeat_region 10964620..10964734 FT /rpt_family="AluJb" FT repeat_region complement(10964737..10965039) FT /rpt_family="AluSx" FT repeat_region complement(10965712..10966008) FT /rpt_family="AluSx" FT repeat_region complement(10966012..10966185) FT /rpt_family="AluSx" FT repeat_region complement(10966205..10966503) FT /rpt_family="AluY" FT repeat_region complement(10966504..10966639) FT /rpt_family="AluSx" FT misc_feature 10966941..10967094 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 92.000" FT misc_feature 10966941..10967033 FT /note="DDS similarity to AA461913 vf95h04.r1 Soares mouse FT mammary gland NbMMG Mus musculus cDNA clone 851575 5'; FT (176..264); 73% identity." FT repeat_region complement(10967178..10967479) FT /rpt_family="AluSx" FT repeat_region complement(10967486..10967771) FT /rpt_family="AluJo" FT repeat_region complement(10967917..10968042) FT /rpt_family="(CATA)n" FT repeat_region complement(10968119..10968305) FT /rpt_family="AluSc" FT repeat_region 10968306..10968576 FT /rpt_family="AluSg" FT repeat_region 10968577..10968611 FT /rpt_family="(GAAA)n" FT repeat_region 10968626..10968923 FT /rpt_family="AluSx" FT misc_feature 10968992..10969019 FT /note="DDS similarity to AA461913 vf95h04.r1 Soares mouse FT mammary gland NbMMG Mus musculus cDNA clone 851575 5'; FT (265..292); 75% identity." FT repeat_region complement(10969151..10969319) FT /rpt_family="MIR" FT repeat_region complement(10969613..10969911) FT /rpt_family="AluSp" FT repeat_region complement(10969919..10970055) FT /rpt_family="(CATA)n" FT repeat_region complement(10970061..10970359) FT /rpt_family="AluSx" FT misc_feature 10970591..10970634 FT /note="DDS similarity to AA461913 vf95h04.r1 Soares mouse FT mammary gland NbMMG Mus musculus cDNA clone 851575 5'; FT (293..336); 82% identity." FT repeat_region 10970928..10971230 FT /rpt_family="AluSg" FT repeat_region 10971236..10971536 FT /rpt_family="AluY" FT repeat_region 10971539..10971835 FT /rpt_family="AluSc" FT repeat_region complement(10972072..10972127) FT /rpt_family="LINE2" FT repeat_region complement(10972093..10972127) FT /rpt_family="MIR" FT repeat_region complement(10972255..10972555) FT /rpt_family="AluSx" FT repeat_region complement(10972573..10972875) FT /rpt_family="AluY" FT repeat_region complement(10972879..10973179) FT /rpt_family="AluJo" FT repeat_region 10973224..10973523 FT /rpt_family="AluSx" FT misc_feature 10973846..10973883 FT /note="DDS similarity to AA461913 vf95h04.r1 Soares mouse FT mammary gland NbMMG Mus musculus cDNA clone 851575 5'; FT (337..374); 84% identity." FT repeat_region 10974317..10974609 FT /rpt_family="AluSp" FT repeat_region complement(10974742..10975008) FT /rpt_family="AluSx" FT repeat_region complement(10975172..10975499) FT /rpt_family="LINE2" FT repeat_region complement(10975560..10975640) FT /rpt_family="LINE2" FT repeat_region complement(10975826..10976122) FT /rpt_family="AluSx" FT repeat_region 10976153..10976321 FT /rpt_family="FRAM" FT repeat_region complement(10976498..10976664) FT /rpt_family="AluJo" FT repeat_region complement(10976710..10976880) FT /rpt_family="AluSq" FT repeat_region complement(10976881..10977181) FT /rpt_family="AluSx" FT repeat_region complement(10977182..10977328) FT /rpt_family="AluSq" FT repeat_region complement(10977331..10977616) FT /rpt_family="AluSq" FT repeat_region complement(10977628..10977765) FT /rpt_family="AluSq" FT repeat_region complement(10977766..10977967) FT /rpt_family="L1MB4" FT repeat_region 10978002..10978312 FT /rpt_family="AluSp" FT repeat_region complement(10978327..10978628) FT /rpt_family="AluSx" FT repeat_region complement(10978634..10978801) FT /rpt_family="L1MB4" FT repeat_region complement(10978919..10979035) FT /rpt_family="MIR" FT repeat_region complement(10979188..10979477) FT /rpt_family="AluSx" FT repeat_region complement(10979521..10979720) FT /rpt_family="MIR" FT misc_feature 10979900..10980039 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 54.000" FT repeat_region 10980733..10980882 FT /rpt_family="FRAM" FT repeat_region 10980885..10981185 FT /rpt_family="AluSx" FT misc_feature 10981443..10981564 FT /note="BLASTN similarity to Z57869 (1..122); match: 0.99, FT score: 1.6e-40; database searched: nt; H.sapiens CpG island FT DNA genomic Mse1 fragment, clone 1g3, forward read FT cpg1g3.ft1k" FT repeat_region complement(10981746..10981773) FT /rpt_family="GC_rich" FT repeat_region complement(10981922..10981988) FT /rpt_family="GC_rich" FT repeat_region 10982124..10982214 FT /rpt_family="(CGG)n" FT repeat_region 10982240..10982400 FT /rpt_family="(CGG)n" FT repeat_region complement(10982402..10982453) FT /rpt_family="GC_rich" FT repeat_region complement(10982606..10982713) FT /rpt_family="GC_rich" FT repeat_region 10984013..10984274 FT /rpt_family="AluSx" FT repeat_region complement(10984314..10984614) FT /rpt_family="AluY" FT repeat_region complement(10984796..10984926) FT /rpt_family="FLAM_C" FT repeat_region complement(10985018..10985065) FT /rpt_family="POLY_A" FT repeat_region complement(10985067..10985362) FT /rpt_family="AluJb" FT repeat_region 10985416..10985714 FT /rpt_family="AluSx" FT repeat_region complement(10985751..10985924) FT /rpt_family="MLT1D" FT repeat_region complement(10986003..10986092) FT /rpt_family="FLAM_A" FT repeat_region complement(10986099..10986399) FT /rpt_family="AluY" FT repeat_region complement(10986400..10986543) FT /rpt_family="MLT1C" FT repeat_region complement(10986549..10986854) FT /rpt_family="AluSp" FT repeat_region complement(10986863..10987001) FT /rpt_family="AluJo" FT repeat_region complement(10988101..10988397) FT /rpt_family="AluSx" FT repeat_region complement(10988402..10988681) FT /rpt_family="AluJb" FT repeat_region complement(10988823..10988897) FT /rpt_family="MER58B" FT repeat_region complement(10988926..10988998) FT /rpt_family="MER58A" FT repeat_region complement(10989484..10989762) FT /rpt_family="AluSx" FT misc_feature complement(10989987..10990138) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 55.000" FT repeat_region complement(10990290..10990590) FT /rpt_family="AluSx" FT repeat_region complement(10991020..10991329) FT /rpt_family="AluJo" FT repeat_region 10991460..10991551 FT /rpt_family="MIR" FT repeat_region 10991562..10991851 FT /rpt_family="AluJo" FT repeat_region 10991916..10991946 FT /rpt_family="MIR" FT repeat_region complement(10992170..10992294) FT /rpt_family="LINE2" FT repeat_region 10992765..10992885 FT /rpt_family="MIR" FT repeat_region complement(10993216..10993456) FT /rpt_family="AluSx" FT mRNA join(<11129634..11129699,11130267..11130377, FT 11132401..11132643,11134194..11134307,11135007..11135114, FT 11136098..11136184,11136976..11137022,11138460..11138626, FT 11141406..11141569,11143966..11144193,11144799..11144876, FT 11145590..11145808,11151983..>11152236) FT /gene="SMARCA4" FT /product="Human mRNA for transcriptional activator hSNF2b" FT CDS join(<11129634..11129699,11130267..11130377, FT 11132401..11132643,11134194..11134307,11135007..11135114, FT 11136098..11136184,11136976..11137022,11138460..11138626, FT 11141406..11141569,11143966..11144193,11144443..11144541, FT 11144799..11144876,11145590..11145808,11151983..>11152234) FT /codon_start=1 FT /gene="SMARCA4" FT /product="SN24_HUMAN" FT /note="POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L4; FT nuclear protein GRB1; homeotic gene regulator; SNF2-BETA" FT /protein_id="AAC97987.1" FT /translation="TLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLT FT TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNK FT LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFL FT LRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL FT MNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRA FT TNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFL FT LSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE FT KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASF FT AHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARN FT PKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWL FT KAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPA FT EKLSPNPPNLTKKMKKIVDAVIKYKD" FT CDS join(<11129634..11129699,11130267..11130377, FT 11132401..11132643,11134194..11134307,11135007..11135114, FT 11136098..11136184,11136976..11137022,11138460..11138626, FT 11141406..11141569,11143966..11144193,11144799..11144876, FT 11145590..11145808,11151983..>11152236) FT /codon_start=1 FT /gene="SMARCA4" FT /product="BRG-1-HUMAN [AA 812-1440]" FT /note="BRAHMA PROTEIN HOMOLOG 1; BRG1 contains a conserved FT domain of the SWI2/SNF2 family necessary for normal mitotic FT growth and transcription; nuclear protein GRB1; homeotic FT gene regulator; SNF2-BETA; MITOTIC GROWTH AND TRANSCRIPTION FT ACTIVATOR; POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L4" FT /protein_id="AAC97986.1" FT /translation="TLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLT FT TYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNK FT LPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFL FT LRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTL FT MNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRA FT TNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFL FT LSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE FT KILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQ FT MIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEE FT EKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSS FT TPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKD" FT repeat_region complement(11133645..11133679) FT /rpt_family="AT_rich" FT repeat_region complement(11137174..11137474) FT /rpt_family="AluSq" FT repeat_region 11137523..11137620 FT /rpt_family="MIR" FT repeat_region complement(11140347..11140651) FT /rpt_family="AluSq" FT repeat_region 11143060..11143362 FT /rpt_family="AluSx" FT repeat_region complement(11146965..11147233) FT /rpt_family="AluJo" FT repeat_region complement(11147304..11148573) FT /rpt_family="L1MB8" FT repeat_region complement(11148722..11148975) FT /rpt_family="MLT1C" FT repeat_region 11149615..11149746 FT /rpt_family="AluJo/FLAM" FT repeat_region 11149748..11150044 FT /rpt_family="AluSx" FT repeat_region 11150236..11150352 FT /rpt_family="L1MB4" FT repeat_region 11150372..11150474 FT /rpt_family="FLAM_A" FT repeat_region 11150477..11150775 FT /rpt_family="AluSc" FT repeat_region 11150793..11150967 FT /rpt_family="AluSq" FT repeat_region 11150988..11151286 FT /rpt_family="AluSc" FT repeat_region 11151311..11151612 FT /rpt_family="AluJo" FT repeat_region 11153381..11153662 FT /rpt_family="AluSx" FT repeat_region 11153686..11153983 FT /rpt_family="AluSx" FT repeat_region 11154164..11154347 FT /rpt_family="AluJb" FT repeat_region 11154372..11154669 FT /rpt_family="AluSx" FT repeat_region 11155103..11155714 FT /rpt_family="L1ME3" FT repeat_region 11155715..11156007 FT /rpt_family="AluY" FT repeat_region 11156013..11156211 FT /rpt_family="L1ME3" FT repeat_region 11156478..11156611 FT /rpt_family="FLAM_C" FT repeat_region 11156620..11156914 FT /rpt_family="AluY" FT repeat_region 11157350..11157643 FT /rpt_family="AluJo" FT repeat_region 11157787..11158085 FT /rpt_family="MER77" FT repeat_region complement(11158087..11158381) FT /rpt_family="AluSx" FT repeat_region 11158387..11158633 FT /rpt_family="MER77" FT repeat_region complement(11158906..11159094) FT /rpt_family="AluSg/x" FT repeat_region complement(11160162..11160253) FT /rpt_family="AluSg/x" FT repeat_region 11160496..11160783 FT /rpt_family="AluSx" FT repeat_region 11161069..11161104 FT /rpt_family="MIR" FT repeat_region complement(11162168..11162464) FT /rpt_family="AluSc" FT repeat_region 11162492..11162789 FT /rpt_family="AluSg" FT repeat_region 11162941..11163087 FT /rpt_family="AluJo" FT repeat_region complement(12995613..12995650) FT /rpt_family="LTR" FT /note="repeat match = LTR7; putative" FT CDS complement(join(12995699..12995874,12996131..12996956, FT 12997868..12997954)) FT /codon_start=1 FT /gene="EKLF" FT /product="erythroid Kruppel-like factor" FT /function="erythroid cell-specific transcription factor of FT the Kruppel zinc finger family" FT /note="comment for location 31852-32677; BLASTX (U37106) FT erythroid Kruppel-like factor EKLF [Homo sapiens]; 100% FT identity to residues 31- 292, (Pval= 1.1e-104); comment for FT location 31420-31595; BLASTX (U37106) erythroid FT Kruppel-like factor EKLF [Homo sapiens]; 100% identity to FT residues 306- 362, (Pval- 14.e-39); comment for location FT 33589-33675; BLASTX (U37106) erythroid Kruppel-like factor FT EKLF [Homo sapiens]; 100% identity to residues 1-30, (Pval= FT 3.0e-12); putative" FT /protein_id="AAB51173.1" FT /translation="MATAETALPSISTLTALGPFPDTQDDFLKWWRSEEAQDMGPGPPD FT PTEPPLHVKSEDQPGEEEDDERGADATWDLDLLLTNFSGPEPGGAPQTCALAPSEASGA FT QYPPPPETLGAYAGGPGLVAGLLGSEDHSGWVRPALRARAPDAFVGPALAPAPAPEPKA FT LALQPVYPGPGAGSSGGYFPRTGLSVPAASGAPYGLLSGYPAMYPAPQYQGHFQLFRGL FT QGPAPGPATSPSFLSCLGPGTVGTGLGGTAEDPGVIAETAPSKRGRRSWARKRQAAHTC FT AHPGCGKSYTKSSHLKAHLRTHTGEKPYACTWEGCGWRFARSDELTRHYRKHTGQRPFR FT CQLCPRAFSRSDHLALHMKRHL" FT misc_feature complement(12995702..12995875) FT /gene="EKLF" FT /note="similarity: gi|1049020; (U25096) Kruppel-like factor FT LKLF [Mus musculus]; similarity: gi|1389692; (U37106) FT erythroid Kruppel-like factor EKLF [Homo sapiens]; FT similarity: sp|P46099|EKLF_MOUSE; ERYTHROID KRUEPPEL-LIKE FT TRANSCRIPTION FACTOR (EKLF); putative" FT misc_feature complement(12995705..12995875) FT /gene="EKLF" FT /note="similarity: gi|912488; (U20344) gut-enriched FT Kruppel-like factor [Mus musculus]; putative" FT misc_feature complement(12996126..12996959) FT /gene="EKLF" FT /note="similarity: gi|1389692; (U37106) erythroid FT Kruppel-like factor EKLF [Homo sapiens]; putative" FT misc_feature complement(12996126..12996305) FT /gene="EKLF" FT /note="similarity: sp|P46099|EKLF_MOUSE; ERYTHROID FT KRUEPPEL-LIKE TRANSCRIPTION FACTOR (EKLF); putative" FT misc_feature complement(12996126..12996272) FT /gene="EKLF" FT /note="similarity: gi|912488; (U20344) gut-enriched FT Kruppel-like factor [Mus musculus]; putative" FT misc_feature complement(12996126..12996260) FT /gene="EKLF" FT /note="similarity: gi|1049020; (U25096) Kruppel-like factor FT LKLF [Mus musculus]; putative" FT misc_feature complement(12996288..12996545) FT /gene="EKLF" FT /note="similarity: sp|P46099|EKLF_MOUSE; ERYTHROID FT KRUEPPEL-LIKE TRANSCRIPTION FACTOR (EKLF); putative" FT misc_feature complement(12996564..12996719) FT /gene="EKLF" FT /note="similarity: sp|P46099|EKLF_MOUSE; ERYTHROID FT KRUEPPEL-LIKE TRANSCRIPTION FACTOR (EKLF); putative" FT misc_feature complement(12996717..12996959) FT /gene="EKLF" FT /note="similarity: sp|P46099|EKLF_MOUSE; ERYTHROID FT KRUEPPEL-LIKE TRANSCRIPTION FACTOR (EKLF); putative" FT repeat_region complement(12997420..12997489) FT /rpt_family="Alu" FT /note="repeat match = HSAL00669; putative" FT repeat_region complement(12997450..12997637) FT /rpt_family="Alu" FT /note="repeat match = HSAL09244; putative" FT misc_feature complement(12997863..12998113) FT /note="predicted exon, grail2exons_human_1.3; frame=2, FT reverse strand, quality=excellent; putative" FT repeat_region 12998959..12999167 FT /rpt_family="Alu" FT /note="repeat match = HSAL05507; putative" FT repeat_region 12999052..12999206 FT /rpt_family="Alu" FT /note="repeat match = HSAL01611; putative" FT repeat_region 12999054..12999174 FT /rpt_family="Alu" FT /note="repeat match = HSAL05899; putative" FT repeat_region 12999248..12999319 FT /rpt_family="Alu" FT /note="repeat match = HSAL05437; putative" FT repeat_region 12999264..12999457 FT /rpt_family="Alu" FT /note="repeat match = HSAL03408; putative" FT repeat_region 12999384..12999477 FT /rpt_family="Alu" FT /note="repeat match = HSAL02430; putative" FT repeat_region 12999481..12999767 FT /rpt_family="Alu" FT /note="repeat match = ALU; putative" FT repeat_region 12999486..12999874 FT /rpt_family="Alu" FT /note="repeat match = HSAL06148; putative" FT misc_feature 12999655..13000003 FT /note="ss region (gap in top strand); putative" FT repeat_region 12999799..12999915 FT /rpt_family="Alu" FT /note="repeat match = HSAL17011; putative" FT repeat_region complement(13000233..13000314) FT /rpt_family="Alu" FT /note="repeat match = HSAL04697; putative" FT repeat_region complement(13000252..13000675) FT /rpt_family="Alu" FT /note="repeat match = HSAL00518; putative" FT repeat_region complement(13000642..13000686) FT /rpt_family="Alu" FT /note="repeat match = HSAL00080; putative" FT repeat_region 13000910..13001355 FT /rpt_family="Alu" FT /note="repeat match = HSAL00518; putative" FT repeat_region 13001216..13001392 FT /rpt_family="Alu" FT /note="repeat match = HSAL01630; putative" FT repeat_region 13001307..13001415 FT /rpt_family="Alu" FT /note="repeat match = HSAL03507; putative" FT misc_feature 13002119..13002220 FT /gene="GCDH" FT /note="similarity: gi|260169; glutaryl-CoA dehydrogenase, FT GCDH [human, liver, Peptide, 438 aa]; putative" FT misc_feature 13002119..13002209 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=0, FT forward strand, quality=excellent; putative" FT misc_feature 13002119..13002181 FT /gene="GCDH" FT /note="similarity: gi|1439521; (U18992) glutaryl-CoA FT dehydrogenase precursor [Mus musculus]; putative" FT CDS join(13002119..13002209,13002301..13002336, FT 13002645..13002788,13002930..13002992,13004297..13004467, FT 13006806..13006935,13007019..13007235,13007724..13007827, FT 13008117..13008242,13008517..13008677,13010282..13010355) FT /codon_start=1 FT /gene="GCDH" FT /product="glutaryl Co-A dehydrogenase" FT /function="mitochondrial matrix -associated, FAD-containing FT dehydrogenase; catalyzes oxidative decarboxylation of FT glutaryl-CoA to crotonyl-CoA + CO2" FT /note="comment for location 42527-42656; gi|260169 FT glutaryl-CoA dehydrogenase, GCDH [human, liver, Peptide, FT 438 aa]; 100% identity to residues 169- 210 (Pval= FT 4.2e-23); comment for location 40018-40188; gi|260169 FT glutaryl-CoA dehydrogenase, GCDH [human, liver, Peptide, FT 438 aa]; 100% identity to residues 112- 167, (Pval= FT 1.5e-32); comment for location 43445-43548; gi|260169 FT glutaryl-CoA dehydrogenase, GCDH [human, liver, Peptide, FT 438 aa]; 100% identity to residues 285- 317 (Pval= FT 1.6e-18); comment for location 42740-42956; gi|260169 FT glutaryl-CoA dehydrogenase, GCDH [human, liver, Peptide, FT 438 aa]; 100% identity to residues 213- 283 (Pval= FT 1.3e-43); comment for location 38366-38509; gi|260169 FT glutaryl-CoA dehydrogenase, GCDH [human, liver, Peptide, FT 438 aa]; 100% identity to residues 44- 90, (Pval= 3.9e-45); FT comment for location 38022-38057; gi|260169 glutaryl-CoA FT dehydrogenase, GCDH [human, liver, Peptide, 438 aa]; 100% FT identity to residues 32- 42, (Pval= 0.99); comment for FT location 38651-38713; gi|260169 glutaryl-CoA dehydrogenase, FT GCDH [human, liver, Peptide, 438 aa]; 100% identity to FT residues 92- 111, (Pval= 3.2e-06); comment for location FT 44238-44398; gi|260169 glutaryl-CoA dehydrogenase, GCDH FT [human, liver, Peptide, 438 aa]; 98% identity to residues FT 361- 413, (Pval= 2.3e-30); comment for location FT 43838-43963; gi|260169 glutaryl-CoA dehydrogenase, GCDH FT [human, liver, Peptide, 438 aa]; 100% identity to residues FT 319- 359, (Pval= 1.8e-21); comment for location FT 46003-46076; gi|260169 glutaryl-CoA dehydrogenase, GCDH FT [human, liver, Peptide, 438 aa]; 100% identity to residues FT 415- 437 (Pval= 8.8e-09); comment for location 37840-37930; FT gi|260169 glutaryl-CoA dehydrogenase, GCDH [human, liver, FT Peptide, 438 aa]; 100% identity to residues 1-30, (Pval= FT 3.9e-45); putative" FT /protein_id="AAB51174.1" FT /translation="MALRGVSVRLLSRGPGLHVLRTWVSSAAQTEKGGRTQSQLAKSSR FT PEFDWQDPLVLEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELG FT VLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQK FT YLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLF FT VVWARCEDGCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGAS FT SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADML FT TEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEYH FT VIRHAMNLEAVNTYEGTHDIHALILGRAITGIQAFTASK" FT misc_feature 13002179..13002244 FT /gene="GCDH" FT /note="similarity: gi|1439521; (U18992) glutaryl-CoA FT dehydrogenase precursor [Mus musculus]; putative" FT misc_feature 13002279..13002335 FT /gene="GCDH" FT /note="similarity: gi|260169; glutaryl-CoA dehydrogenase, FT GCDH [human, liver, Peptide, 438 aa]; putative" FT misc_feature 13002303..13002335 FT /gene="GCDH" FT /note="similarity: gi|260168; glutaryl-CoA dehydrogenase, FT GCDH [swine, liver, Peptide Partial, 408...; putative" FT misc_feature 13002635..13002787 FT /gene="GCDH" FT /note="similarity: gi|1439521; (U18992) glutaryl-CoA FT dehydrogenase precursor [Mus musculus]; putative" FT misc_feature 13002644..13002787 FT /gene="GCDH" FT /note="similarity: gi|260169; glutaryl-CoA dehydrogenase, FT GCDH [human, liver, Peptide, 438 aa]; similarity: FT gi|260168; glutaryl-CoA dehydrogenase, GCDH [swine, liver, FT Peptide Partial, 408...; putative" FT misc_feature 13002671..13002800 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=0, FT forward strand, quality=excellent; putative" FT misc_feature 13002894..13002992 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=0, FT forward strand, quality=good; putative" FT misc_feature 13002929..13002994 FT /gene="GCDH" FT /note="similarity: gi|260169; glutaryl-CoA dehydrogenase, FT GCDH [human, liver, Peptide, 438 aa]; similarity: FT gi|1439521; (U18992) glutaryl-CoA dehydrogenase precursor FT [Mus musculus]; similarity: gi|260168; glutaryl-CoA FT dehydrogenase, GCDH [swine, liver, Peptide Partial, 408...; FT putative" FT repeat_region complement(13003071..13003340) FT /rpt_family="Alu" FT /note="repeat match = HSAL04474; putative" FT repeat_region complement(13003130..13003655) FT /rpt_family="Alu" FT /note="repeat match = HSAL02812; putative" FT repeat_region complement(13003132..13003995) FT /rpt_family="Alu" FT /note="repeat match = HSAL00363; putative" FT repeat_region complement(13003787..13004049) FT /rpt_family="Alu" FT /note="repeat match = HSAL02071; putative" FT repeat_region complement(13004012..13004071) FT /rpt_family="Alu" FT /note="repeat match = HSAL05934; putative" FT misc_feature 13004296..13004487 FT /gene="GCDH" FT /note="similarity: gi|1041334; (Z66513) F54D5.7 FT [Caenorhabditis elegans]; putative" FT misc_feature 13004296..13004472 FT /gene="GCDH" FT /note="similarity: gi|260169; glutaryl-CoA dehydrogenase, FT GCDH [human, liver, Peptide, 438 aa]; similarity: FT gi|1439521; (U18992) glutaryl-CoA dehydrogenase precursor FT [Mus musculus]; putative" FT misc_feature 13004296..13004451 FT /gene="GCDH" FT /note="similarity: gi|260168; glutaryl-CoA dehydrogenase, FT GCDH [swine, liver, Peptide Partial, 408 ...; putative" FT misc_feature 13004297..13004467 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=2, FT forward strand, quality=excellent; putative" FT misc_feature 13004434..13004472 FT /gene="GCDH" FT /note="similarity: gi|260168; glutaryl-CoA dehydrogenase, FT GCDH [swine, liver, Peptide Partial, 408 ...; putative" FT repeat_region 13004733..13004778 FT /rpt_family="Alu" FT /note="repeat match = HSAL01587; putative" FT repeat_region 13004744..13004866 FT /rpt_family="Alu" FT /note="repeat match = HSAL10737; putative" FT misc_feature 13004947..13005294 FT /gene="GCDH" FT /note="similarity: sp|P10660|RS6_HUMAN; 40S RIBOSOMAL FT PROTEIN S6 (PHOSPHOPROTEIN NP33).; putative" FT misc_feature 13004947..13005178 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=2, FT forward strand, quality=good; putative" FT misc_feature 13005290..13005691 FT /gene="GCDH" FT /note="similarity: sp|P10660|RS6_HUMAN; 40S RIBOSOMAL FT PROTEIN S6 (PHOSPHOPROTEIN NP33).; putative" FT misc_feature 13005329..13005443 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=0, FT forward strand, quality=good; putative" FT misc_feature 13005506..13005694 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=0, FT forward strand, quality=good; putative" FT misc_feature 13005509..13005691 FT /gene="GCDH" FT /note="similarity: sp|P10660|RS6_HUMAN; 40S RIBOSOMAL FT PROTEIN S6 (PHOSPHOPROTEIN NP33).; putative" FT repeat_region complement(13006074..13006733) FT /rpt_family="Alu" FT /note="repeat match = HSAL00919; putative" FT misc_feature 13006490..13006591 FT /gene="GCDH" FT /note="ss region (gap in bottom strand); putative" FT misc_feature 13006805..13006936 FT /gene="GCDH" FT /note="similarity: gi|1439521; (U18992) glutaryl-CoA FT dehydrogenase precursor [Mus musculus]; similarity: FT gi|260169; glutaryl-CoA dehydrogenase, GCDH [human, liver, FT Peptide, 438 aa]; similarity: gi|1041334; (Z66513) F54D5.7 FT [Caenorhabditis elegans]; similarity: gi|260168; FT glutaryl-CoA dehydrogenase, GCDH [swine, liver, Peptide FT Partial, 408; putative" FT misc_feature 13006842..13006935 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=0, FT forward strand, quality=excellent; putative" FT misc_feature 13007019..13007235 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=2, FT forward strand, quality=excellent; putative" FT misc_feature 13007020..13007238 FT /gene="GCDH" FT /note="similarity: gi|260168; glutaryl-CoA dehydrogenase, FT GCDH [swine, liver, Peptide Partial, 408; putative" FT misc_feature 13007020..13007235 FT /gene="GCDH" FT /note="similarity: gi|260169; glutaryl-CoA dehydrogenase, FT GCDH [human, liver, Peptide, 438 aa]; putative" FT misc_feature 13007020..13007232 FT /gene="GCDH" FT /note="similarity: gi|1439521; (U18992) glutaryl-CoA FT dehydrogenase precursor [Mus musculus]; putative" FT misc_feature 13007020..13007064 FT /gene="GCDH" FT /note="similarity: gi|1041334; (Z66513) F54D5.7 FT [Caenorhabditis elegans]; putative" FT misc_feature 13007080..13007232 FT /gene="GCDH" FT /note="similarity: gi|1041334; (Z66513) F54D5.7 FT [Caenorhabditis elegans]; putative" FT misc_feature 13007709..13007828 FT /gene="GCDH" FT /note="similarity: gi|1439521; (U18992) glutaryl-CoA FT dehydrogenase precursor [Mus musculus]; putative" FT misc_feature 13007712..13007828 FT /gene="GCDH" FT /note="similarity: gi|260169; glutaryl-CoA dehydrogenase, FT GCDH [human, liver, Peptide, 438 aa]; similarity: FT gi|260168; glutaryl-CoA dehydrogenase, GCDH [swine, liver, FT Peptide Partial, 408; putative" FT misc_feature 13007718..13007828 FT /gene="GCDH" FT /note="similarity: gi|1041334; (Z66513) F54D5.7 FT [Caenorhabditis elegans]; putative" FT misc_feature 13007724..13007831 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=1, FT forward strand, quality=excellent; putative" FT misc_feature 13008115..13008243 FT /gene="GCDH" FT /note="similarity: gi|1439521; (U18992) glutaryl-CoA FT dehydrogenase precursor [Mus musculus]; similarity: FT gi|1041334; (Z66513) F54D5.7 [Caenorhabditis elegans]; FT similarity: gi|260169; glutaryl-CoA dehydrogenase, GCDH FT [human, liver, Peptide, 438 aa]; similarity: gi|260168; FT glutaryl-CoA dehydrogenase, GCDH [swine, liver, Peptide FT Partial, 408; putative" FT misc_feature 13008117..13008242 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=2, FT forward strand, quality=excellent; putative" FT misc_feature 13008515..13008679 FT /gene="GCDH" FT /note="similarity: gi|1439521; (U18992) glutaryl-CoA FT dehydrogenase precursor [Mus musculus]; similarity: FT gi|260169; glutaryl-CoA dehydrogenase, GCDH [human, liver, FT Peptide, 438 aa]; similarity: gi|260168; glutaryl-CoA FT dehydrogenase, GCDH [swine, liver, Peptide Partial, 408; FT putative" FT misc_feature 13008517..13008677 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=0, FT forward strand, quality=excellent; putative" FT misc_feature 13008527..13008679 FT /gene="GCDH" FT /note="similarity: gi|1041334; (Z66513) F54D5.7 FT [Caenorhabditis elegans]; putative" FT repeat_region 13009443..13009504 FT /rpt_family="Alu" FT /note="repeat match = HLAL00010; putative" FT repeat_region 13009457..13009607 FT /rpt_family="Alu" FT /note="repeat match = HSAL01694; putative" FT misc_feature 13010282..13010351 FT /gene="GCDH" FT /note="predicted exon, grail2exons_human_1.3; frame=2, FT forward strand, quality=excellent; putative" FT repeat_region 13011562..13011636 FT /rpt_family="Alu" FT /note="repeat match = HSAL07754; putative" FT repeat_region 13011579..13012194 FT /rpt_family="Alu" FT /note="repeat match = HSAL00630; putative" FT repeat_region 13012064..13012329 FT /rpt_family="Alu" FT /note="repeat match = HSAL03283; putative" FT repeat_region 13012233..13012359 FT /rpt_family="Alu" FT /note="repeat match = HSAL06104; putative" FT repeat_region complement(13012408..13012551) FT /rpt_family="Alu" FT /note="repeat match = HSAL04964; putative" FT repeat_region complement(13012440..13012729) FT /rpt_family="Alu" FT /note="repeat match = ALU; putative" FT repeat_region complement(13012683..13012743) FT /rpt_family="Alu" FT /note="repeat match = HSAL13971; putative" FT repeat_region complement(13012762..13013040) FT /rpt_family="MER" FT /note="repeat match = MER7A; putative" FT repeat_region 13013232..13013435 FT /rpt_family="Alu" FT /note="repeat match = HSAL16443; putative" FT repeat_region 13013296..13013612 FT /rpt_family="Alu" FT /note="repeat match = HSAL03102; putative" FT repeat_region 13013498..13013646 FT /rpt_family="Alu" FT /note="repeat match = HSAL02663; putative" FT repeat_region complement(13013734..13013785) FT /rpt_family="Alu" FT /note="repeat match = HSAL02430; putative" FT repeat_region 13013792..13013874 FT /rpt_family="Alu" FT /note="repeat match = HSAL00416; putative" FT repeat_region 13013825..13013887 FT /rpt_family="Alu" FT /note="repeat match = HSAL06165; putative" FT repeat_region complement(13013902..13014488) FT /rpt_family="Alu" FT /note="repeat match = HSAL06169; putative" FT repeat_region complement(13014245..13014556) FT /rpt_family="Alu" FT /note="repeat match = HSAL06431; putative" FT repeat_region complement(13014559..13014623) FT /rpt_family="Alu" FT /note="repeat match = HSAL07965; putative" FT repeat_region complement(13014573..13014700) FT /rpt_family="Alu" FT /note="repeat match = HSAL02075; putative" FT repeat_region complement(13014660..13014711) FT /rpt_family="Alu" FT /note="repeat match = HSAL04383; putative" FT repeat_region 13015534..13015600 FT /rpt_family="Alu" FT /note="repeat match = HSAL01428; putative" FT repeat_region 13015548..13015829 FT /rpt_family="Alu" FT /note="repeat match = HSAL01581; putative" FT repeat_region complement(13016146..13016539) FT /rpt_family="Alu" FT /note="repeat match = HSAL03071; putative" FT repeat_region complement(13016147..13016678) FT /rpt_family="Alu" FT /note="repeat match = HSAL02158; putative" FT repeat_region complement(13016548..13016726) FT /rpt_family="Alu" FT /note="repeat match = HSAL02394; putative" FT repeat_region complement(13016748..13016964) FT /rpt_family="Alu" FT /note="repeat match = HSAL05071; putative" FT repeat_region complement(13016908..13016983) FT /rpt_family="Alu" FT /note="repeat match = HSAL01352; putative" FT repeat_region 13017441..13017717 FT /rpt_family="Alu" FT /note="repeat match = HSAL04932; putative" FT repeat_region 13017441..13017644 FT /rpt_family="Alu" FT /note="repeat match = HSAL06189; putative" FT repeat_region 13017649..13017738 FT /rpt_family="Alu" FT /note="repeat match = HSAL06696; putative" FT repeat_region 13018310..13018391 FT /rpt_family="Alu" FT /note="repeat match = HSAL13218; putative" FT repeat_region 13018334..13018892 FT /rpt_family="Alu" FT /note="repeat match = HSAL04809; putative" FT misc_feature complement(13018552..13018828) FT /note="predicted exon, grail2exons_human_1.3; frame=1, FT reverse strand, quality=excellent; putative" FT repeat_region 13018903..13018956 FT /rpt_family="Alu" FT /note="repeat match = HSAL04644; putative" FT repeat_region 13018914..13018976 FT /rpt_family="Alu" FT /note="repeat match = HSAL06589; putative" FT misc_feature complement(13106467..13106592) FT /note="Bases 51518-51643 is representative of sequence from FT AC004660 only. Forced join 57489." FT repeat_region 13178640..13178938 FT /rpt_family="AluY" FT repeat_region 13179084..13179223 FT /rpt_family="(GGAA)n" FT misc_feature 13180615..13181040 FT /note="BLASTN similarity to AQ511926.1 (34..459); match: FT 0.97, score: 1.6e-160; database searched: month.na; FT HS_5127_A2_D01_T7A RPCI-11 Human Male BAC Library Homo FT sapiens genomic clone Plate=703 Col=2 Row=G, genomic FT survey" FT repeat_region 13183453..13183659 FT /rpt_family="MER20" FT misc_feature 13183782..13183923 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 93.000" FT gene <13183860..13205849 FT /gene="NFIX" FT /note="nuclear factor I/X; synonym: CCAAT-binding FT transcription factor" FT mRNA join(<13183860..13183923,13184236..13184310, FT 13184720..13184840,13186349..13186485,13189427..13189549, FT 13192494..13192669,13198803..13198950,13201113..13201204, FT 13205449..13205849) FT /gene="NFIX" FT /product="NFI-X3" FT /note="alternatively spliced" FT mRNA join(<13183860..13183923,13184236..13184310, FT 13184720..13184840,13186349..13186485,13189427..13189549, FT 13192494..13192669,13201113..13201204,13205449..13205849) FT /gene="NFIX" FT /product="nuclear factor I-X" FT /note="HUMNFI; alternatively spliced" FT CDS join(<13183860..13183923,13184236..13184310, FT 13184720..13184840,13186349..13186485,13189427..13189549, FT 13192494..13192669,13198803..13198950,13201113..13201204, FT 13205449..13205463) FT /codon_start=1 FT /gene="NFIX" FT /product="NFI-X3" FT /note="similar to mouse NFI-X3 transcription factor; FT alternatively spliced" FT /protein_id="AAD38241.1" FT /translation="ESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVS FT QTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPV FT DDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHH FT PLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVC FT SDGSGQATGQPNGSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSP FT SFATTGASSANRFVSIGPRDGNFLNIPQQSQSWFL" FT CDS join(<13183860..13183923,13184236..13184310, FT 13184720..13184840,13186349..13186485,13189427..13189549, FT 13192494..13192669,13201113..13201184) FT /codon_start=1 FT /gene="NFIX" FT /product="nuclear factor I-X" FT /note="alternatively spliced; nuclear factor I/X; FT NFIX_HUMAN NUCLEAR FACTOR 1/X; NFI-X; NF-I/X; TGGCA-BINDING FT PROTEIN; CTF" FT /protein_id="AAD38240.1" FT /translation="ESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVS FT QTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPV FT DDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHH FT PLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVC FT SDGSGQATGQHSQRQAPPLPTGLSASDPGTATF" FT repeat_region complement(13185094..13185150) FT /rpt_family="LINE2" FT repeat_region 13185408..13185471 FT /rpt_family="(GGGA)n" FT repeat_region 13185602..13185903 FT /rpt_family="AluY" FT repeat_region complement(13186851..13187028) FT /rpt_family="MER20" FT repeat_region complement(13187266..13187306) FT /rpt_family="(CA)n" FT repeat_region complement(13191073..13191338) FT /rpt_family="AluJo" FT repeat_region 13191372..13191517 FT /rpt_family="FRAM" FT repeat_region 13191533..13191824 FT /rpt_family="AluY" FT repeat_region 13191832..13192132 FT /rpt_family="AluJb" FT repeat_region 13192208..13192269 FT /rpt_family="MER58A" FT repeat_region complement(13192270..13192301) FT /rpt_family="(TAA)n" FT repeat_region complement(13193049..13193264) FT /rpt_family="MER20" FT repeat_region complement(13193830..13193886) FT /rpt_family="(GGA)n" FT repeat_region complement(13194747..13194904) FT /rpt_family="MER5A" FT repeat_region 13194974..13195278 FT /rpt_family="AluSx" FT repeat_region 13195602..13195903 FT /rpt_family="AluSx" FT repeat_region complement(13197034..13197135) FT /rpt_family="LINE2" FT repeat_region 13197187..13197302 FT /rpt_family="MIR" FT repeat_region complement(13197350..13197516) FT /rpt_family="MER20" FT repeat_region 13198578..13198618 FT /rpt_family="POLY_A" FT repeat_region complement(13199304..13199359) FT /rpt_family="POLY_A" FT repeat_region complement(13199617..13199682) FT /rpt_family="(GAAAA)n" FT repeat_region 13202215..13202243 FT /rpt_family="POLY_A" FT repeat_region complement(13203876..13204054) FT /rpt_family="MER3" FT repeat_region 13204312..13204432 FT /rpt_family="MIR" FT misc_feature complement(13205608..13205897) FT /note="DDS similarity to AA678316 zi16c04.s1 Soares fetal FT liver spleen 1NFLS S1 Homo sapiens cDNA clone 430950 3'; FT (67..355); 99% identity." FT repeat_region complement(13205964..13206027) FT /rpt_family="(GGGA)n" FT misc_feature 13206056..13206529 FT /note="BLASTN similarity to AL047288.1 (9..482); match: FT 0.99, score: 1.8e-186; database searched: month.na; FT DKFZp586I2419_r1 586 (synonym: hute1) Homo sapiens cDNA FT clone DKFZp586I2419, mRNA sequence" FT repeat_region 13207168..13207207 FT /rpt_family="(GGGA)n" FT repeat_region complement(13207404..13207437) FT /rpt_family="GC_rich" FT misc_feature complement(13207438..13207781) FT /note="BLASTN similarity to AL047289.1 (9..352); match: FT 0.99, score: 2.8e-136; database searched: month.na; FT DKFZp586I2419_s1 586 (synonym: hute1) Homo sapiens cDNA FT clone DKFZp586I2419, mRNA sequence" FT repeat_region complement(13207639..13207694) FT /rpt_family="GC_rich" FT misc_feature complement(13207697..13207762) FT /note="DDS similarity to AA678316 zi16c04.s1 Soares fetal FT liver spleen 1NFLS S1 Homo sapiens cDNA clone 430950 3'; FT (1..66); 100% identity." FT repeat_region complement(13207974..13208014) FT /rpt_family="POLY_A" FT repeat_region complement(13208356..13208491) FT /rpt_family="GC_rich" FT misc_feature complement(13209096..13209188) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 78.000" FT repeat_region complement(13209294..13209375) FT /rpt_family="(GGA)n" FT repeat_region complement(13209484..13209507) FT /rpt_family="GC_rich" FT mRNA complement(13209847..>13210263) FT /product="LYL-1 protein" FT /note="HUMLYL1A" FT misc_feature 13209940..13210131 FT /note="BLASTN similarity to Z58795 (1..192); match: 0.97, FT score: 2.3e-67; database searched: nt; H.sapiens CpG island FT DNA genomic Mse1 fragment, clone 50e3, forward read FT cpg50e3.ft1a" FT repeat_region complement(13210175..13210251) FT /rpt_family="GC_rich" FT mRNA complement(13209827..13213539) FT /product="Human LYL-1 protein gene" FT /note="LYL1 mRNA appears to encode two ORFs: LYL1 and a FT partial protein of unknown function." FT misc_feature complement(13210097..13210548) FT /note="DDS similarity to AA020209 mh51h08.r1 Soares mouse FT placenta 4NbMP13.5 14.5 Mus musculus cDNA clone 446079 5' FT similar to gb:M22637 LYL-1 PROTEIN (HUMAN); gb:X57687 FT M.musculus LYL gene (MOUSE); (82..528) 78% identity.~BLASTN FT similarity to AI090978 (1..281); match: 0.96, score: FT 1.8e-123; database searched: month.na; qa45a09.s1 FT Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1689688 3' FT similar to gb:M22637 LYL-1 PROTEIN (HUMAN)~BLASTN FT similarity to AI090978 (285..334); match: 0.9, score: FT 1.8e-123; database searched: month.na; qa45a09.s1 FT Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1689688 3' FT similar to gb:M22637 LYL-1 PROTEIN (HUMAN)" FT CDS complement(join(13210133..13210548,13211471..13211562, FT 13211651..13211946)) FT /codon_start=1 FT /gene="LYL1" FT /product="LYL1_HUMAN" FT /note="LYL1 HELIX-LOOP-HELIX MOTIF-CONTAINING TRANSCRIPTION FT FACTOR; Similarity to other members of the Myc family of FT helix-loop-helix transcription factors" FT /protein_id="AAC33149.1" FT /translation="MTEKAEMVCAPSPAPAPPPKPASPGPPQVEEVGHRGGSSPPRLPP FT GVPVISLGHSRPPGVAMPTTELGTLRPPLLQLSTLGTAPPTLALHYHPHPFLNSVYIGP FT AGPFSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKL FT LPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRKRPVHRVPDDGA FT RRGSGRRAEAAARSQPAPPADPDGSPGGAARPIKMEQTALSPEVR" FT repeat_region complement(13210175..13210277) FT /rpt_family="GC_rich" FT misc_feature complement(13210192..13210548) FT /gene="LYL1" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 82.000~DDS similarity FT to overlapping ESTs: W90856 mf79g08.r1 Soares mouse embryo FT NbME13.5 14.5 Mus musculus cDNA clone 420542 5' similar to FT gb:M22637 LYL-1 PROTEIN (HUMAN); gb:X57687 M.musculus LYL FT gene (MOUSE); (156..535); 79% identity.~(7389..7144) FT AA034821 mi51f02.r1 Soares mouse embryo NbME13.5 14.5 Mus FT musculus cDNA clone 467067 5' similar to gb:M22637 LYL-1 FT PROTEIN (HUMAN); gb:X57687 M.musculus LYL gene (MOUSE); FT (335..579); 83% identity.~(7389..7129) AA050363 mj09f06.r1 FT Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA clone FT 475619 5' similar to gb:M22637 LYL-1 PROTEIN (HUMAN); FT gb:X57687 M.musculus LYL gene (MOUSE); (335..594); 84% FT identity." FT misc_feature complement(13211471..13211562) FT /gene="LYL1" FT /note="DDS similarity to overlapping ESTs: (8403..8312) FT AA034821 mi51f02.r1 Soares mouse embryo NbME13.5 14.5 Mus FT musculus cDNA clone 467067 5' similar to gb:M22637 LYL-1 FT PROTEIN (HUMAN); gb:X57687 M.musculus LYL gene (MOUSE); FT (243..334); 90% identity.~(8393..8312) AA020209 mh51h08.r1 FT Soares mouse placenta 4NbMP13.5 14.5 Mus musculus cDNA FT clone 446079 5' similar to gb:M22637 LYL-1 PROTEIN (HUMAN); FT gb:X57687 M.musculus LYL gene (MOUSE); (1..81) 89% FT identity.~(8403..8312) AA050363 mj09f06.r1 Soares mouse FT embryo NbME13.5 14.5 Mus musculus cDNA clone 475619 5' FT similar to gb:M22637 LYL-1 PROTEIN (HUMAN); gb:X57687 FT M.musculus LYL gene (MOUSE); (243..334); 90% identity." FT misc_feature complement(13211651..13211862) FT /gene="LYL1" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 82.000~DDS similarity FT to (8553..8492) W90856 mf79g08.r1 Soares mouse embryo FT NbME13.5 14.5 Mus musculus cDNA clone 420542 5' similar to FT gb:M22637 LYL-1 PROTEIN (HUMAN); gb:X57687 M.musculus LYL FT gene (MOUSE); (1..62); 74% identity." FT misc_feature complement(13211926..13212009) FT /gene="LYL1" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 60.000~DDS similarity to FT overlapping ESTs: AA034821 mi51f02.r1 Soares mouse embryo FT NbME13.5 14.5 Mus musculus cDNA clone 467067 5' similar to FT gb:M22637 LYL-1 PROTEIN (HUMAN); gb:X57687 M.musculus LYL FT gene (MOUSE); (159..242); 77% identity.~AA050363 mj09f06.r1 FT Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA clone FT 475619 5' similar to gb:M22637 LYL-1 PROTEIN (HUMAN); FT gb:X57687 M.musculus LYL gene (MOUSE); (158..242); 78% FT identity." FT repeat_region complement(13212788..13213092) FT /rpt_family="AluJo" FT repeat_region 13213257..13213290 FT /rpt_family="(TGAA)n" FT repeat_region complement(13213565..13213610) FT /rpt_family="GC_rich" FT repeat_region 13213746..13213779 FT /rpt_family="GC_rich" FT repeat_region 13214729..13215030 FT /rpt_family="AluJb" FT misc_feature complement(13215721..13215895) FT /note="DDS similarity to overlapping ESTs: F15249|DA1C0LH05 FT H. sapiens partial cDNA sequence; (174..1); 99% FT identity.~AA176151 zp24h06.s1 Stratagene neuroepithelium FT (#937231) Homo sapiens cDNA clone 610427 3'; (174..1); 97% FT identity.~Additional EST matches: T15798, AF075055" FT mRNA 13215726..>13220244 FT /product="Human RSU-1/RSP-1 mRNA" FT /note="Only 766 bp of RSU-1/RSP-1 cDNA (6 exons) are FT represented in sequence of this cosmid. The FT protein-encoding portion of this transcript is not found in FT this cosmid.~May represent anti-sense transcript for tRNA FT (Guanine-N2-)- Methyltransferase as intron/exon structure FT is same for two transcripts, but encoded on opposite FT strands.~Rsp-1 product is presumably capable of suppressing FT v-Ras transformant in vitro." FT CDS complement(join(13215749..13215895,13216081..13216210, FT 13216301..13216420,13218388..13218463,13218573..13218673, FT 13220195..13220280,13220364..13220498,13220583..13220652, FT 13220729..13220815,13220972..13221120,13223519..13223631, FT 13223710..13223825,13226093..13226280,13226440..13226582, FT 13226811..13226866,13226960..13227213)) FT /codon_start=1 FT /product="R29425_1" FT /note="Hypothetical human tRNA FT (Guanine-N2-)-Methyltransferase; Hypothetical protein is FT 42% identical to two isoforms of Schizosaccharomyces pombe FT N2,N2-dimethylguanosine tRNA methyltransferase represented FT in accessions AL031158 and AJ224000" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC33150.1" FT /translation="MQGSSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGPYG FT EERPREVQETTVTEGAAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGIQI FT KVPGEKDTQKVVVDLSEQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAAS FT GLRSIRFALEVPGLRSVVANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMYQHQR FT VSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSKYGAMA FT LKSRACHEMALRIVLHSLDLRANCYQRFVVPLLSISADFYVRVFVRVFTGQAKVKASAS FT KQALVFQCVGCGAFHLQRLGKASGVPSGRAKFSAACGPPVTPECEHCGQRHQLGGPMWA FT EPIHDLDFVGRVLEAVSANPGRFHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIHCN FT TPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALWDIMQKECPVKRERLSETSPAF FT RILSVEPRLQANFTIREDANPSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEER FT RRLLQNKRKEPPEDVAQRAARLKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPD FT CPETSNQTPPGPGAAAGPGID" FT misc_feature complement(13216081..13216210) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~DDS similarity FT to overlapping ESTs: (13051..12922) AA176151 zp24h06.s1 FT Stratagene neuroepithelium (#937231) Homo sapiens cDNA FT clone 610427 3'; (306..175); 98% identity.~(13041..12922) FT F15249|DA1C0LH05 H. sapiens partial cDNA sequence; FT (294..175); 100% identity.~Additional EST matches: FT AF075055, T15798" FT misc_feature complement(13216301..13216420) FT /note="DDS similarity to (13261..13142) AA176151 zp24h06.s1 FT Stratagene neuroepithelium (#937231) Homo sapiens cDNA FT clone 610427 3'; (427..307); 97% identity.~(13254..13142) FT predicted exon, program: grail2exons_human_1.3, frame: 0, FT quality: excellent, score: 100.000~Addiitonal EST matches: FT AF075055" FT repeat_region 13216593..13216894 FT /rpt_family="AluSx" FT repeat_region complement(13216896..13217185) FT /rpt_family="AluJo" FT repeat_region complement(13217186..13217266) FT /rpt_family="LINE2" FT repeat_region complement(13217296..13217600) FT /rpt_family="AluSx" FT repeat_region complement(13217636..13217948) FT /rpt_family="AluY" FT repeat_region complement(13217951..13218252) FT /rpt_family="AluSx" FT misc_feature complement(13218388..13218464) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature complement(13218573..13218673) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 57.000" FT repeat_region complement(13218803..13219102) FT /rpt_family="AluSc" FT repeat_region complement(13219103..13219406) FT /rpt_family="AluSx" FT repeat_region complement(13219422..13219723) FT /rpt_family="AluSx" FT repeat_region complement(13219731..13219897) FT /rpt_family="AluJo" FT repeat_region complement(13219900..13219970) FT /rpt_family="(CATA)n" FT repeat_region complement(13219977..13220091) FT /rpt_family="AluJo" FT misc_feature complement(13220195..13220280) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(13220364..13220498) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 96.000" FT misc_feature complement(13220583..13220652) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 69.000" FT misc_feature complement(13220729..13220815) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 50.000" FT misc_feature complement(13220972..13221120) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region 13221197..13221358 FT /rpt_family="MIR" FT repeat_region 13221500..13221784 FT /rpt_family="AluSq" FT repeat_region complement(13221890..13222149) FT /rpt_family="AluJo" FT repeat_region complement(13222197..13222511) FT /rpt_family="AluSq" FT repeat_region complement(13222514..13222812) FT /rpt_family="AluY" FT repeat_region complement(13222815..13223102) FT /rpt_family="AluSq" FT repeat_region complement(13223108..13223207) FT /rpt_family="MIR" FT repeat_region complement(13223224..13223245) FT /rpt_family="AT_rich" FT misc_feature complement(13223519..13223825) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~DDS similarity FT to (20666..20553) AA350606 EST57945 Infant brain Homo FT sapiens cDNA 5' end similar to similar to N2, FT N2-dimethylguanine tRNA methyltransferase; (273..390); 85% FT identity." FT repeat_region 13223899..13223971 FT /rpt_family="MIR" FT repeat_region complement(13223974..13224271) FT /rpt_family="AluSx" FT repeat_region complement(13224422..13224723) FT /rpt_family="AluSx" FT repeat_region complement(13224727..13224855) FT /rpt_family="AluJb" FT repeat_region 13224914..13224982 FT /rpt_family="MER58B" FT repeat_region 13224988..13225051 FT /rpt_family="MER58B" FT repeat_region 13225054..13225198 FT /rpt_family="AluSq" FT repeat_region 13225200..13225493 FT /rpt_family="AluSg" FT repeat_region 13225494..13225672 FT /rpt_family="AluSq" FT repeat_region 13225731..13225839 FT /rpt_family="LINE2" FT repeat_region complement(13225919..13226068) FT /rpt_family="MIR" FT misc_feature complement(13226093..13226280) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 75.000~DDS similarity FT to overlapping ESTs: (23121..22934) AA350606 EST57945 FT Infant brain Homo sapiens cDNA 5' end similar to similar to FT N2, N2-dimethylguanine tRNA methyltransferase; (82..272); FT 98% identity.~(23121..23062) AA682998 ae89d07.s1 Stratagene FT schizo brain S11 Homo sapiens cDNA clone 971341 3' similar FT to SW:TRM1_YEAST P15565 N2,N2-DIMETHYLGUANOSINE TRNA FT METHYLTRANSFERASE PRECURSOR ; (378..438); 97% identity.~" FT misc_feature complement(13226440..13226582) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 95.000~DDS similarity FT to overlapping ESTs: AA682998 ae89d07.s1 Stratagene schizo FT brain S11 Homo sapiens cDNA clone 971341 3' similar to FT SW:TRM1_YEAST P15565 N2,N2-DIMETHYLGUANOSINE TRNA FT METHYLTRANSFERASE PRECURSOR ; (235..377); 100% FT identity.~(23360..23281) AA350606 EST57945 Infant brain FT Homo sapiens cDNA 5' end similar to similar to N2, FT N2-dimethylguanine tRNA methyltransferase; (1..81); 99% FT identity. " FT misc_feature complement(13226811..13226866) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~DDS similarity FT to AA682998 ae89d07.s1 Stratagene schizo brain S11 Homo FT sapiens cDNA clone 971341 3' similar to SW:TRM1_YEAST FT P15565 N2,N2-DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE FT PRECURSOR ; (179..234); 100% identity. " FT misc_feature complement(13226940..13227245) FT /note="DDS similarity to AA349769 EST56880 Infant brain FT Homo sapiens cDNA 5' end similar to similar to N2, FT N2-dimethylguanosine tRNA methyltransferase; (57..364); 94% FT identity. " FT misc_feature complement(13226960..13227154) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 92.000~DDS similarity FT to (23978..23801) AA682998 ae89d07.s1 Stratagene schizo FT brain S11 Homo sapiens cDNA clone 971341 3' similar to FT SW:TRM1_YEAST P15565 N2,N2-DIMETHYLGUANOSINE TRNA FT METHYLTRANSFERASE PRECURSOR ; (1..178); 100% FT identity.~(24086..23804) C17472 Human placenta cDNA 5'-end FT GEN-548A01; (48..330); 99% identity.~Additional EST FT matches: Z42503" FT misc_feature complement(13227467..13227523) FT /note="DDS similarity to overlapping ESTs: (24364..24308) FT AA349769 EST56880 Infant brain Homo sapiens cDNA 5' end FT similar to similar to N2, N2-dimethylguanosine tRNA FT methyltransferase; (1..56); 84% identity.~(24354..24308) FT C17472 Human placenta cDNA 5'-end GEN-548A01; (1..47); 100% FT identity. " FT repeat_region complement(13227708..13227744) FT /rpt_family="MIR" FT repeat_region 13227839..13228029 FT /rpt_family="MIR" FT repeat_region 13228114..13228265 FT /rpt_family="MIR" FT repeat_region 13228277..13228367 FT /rpt_family="MIR" FT repeat_region complement(13228374..13228666) FT /rpt_family="AluSx" FT repeat_region complement(13228787..13228884) FT /rpt_family="MIR" FT repeat_region complement(13228988..13229029) FT /rpt_family="GC_rich" FT repeat_region complement(13229043..13229228) FT /rpt_family="(CGG)n" FT repeat_region complement(13229232..13229322) FT /rpt_family="GC_rich" FT repeat_region 13229571..13229700 FT /rpt_family="(GGA)n" FT repeat_region complement(13230705..13230780) FT /rpt_family="MIR" FT misc_feature complement(13231140..13231241) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 67.000" FT repeat_region complement(13232619..13232714) FT /rpt_family="MIR" FT repeat_region 13233172..13233226 FT /rpt_family="MIR" FT repeat_region 13233261..13233439 FT /rpt_family="MER20" FT repeat_region complement(13233678..13233811) FT /rpt_family="MIR" FT repeat_region 13233997..13234033 FT /rpt_family="LINE2" FT misc_feature 13234151..13234260 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 93.000" FT repeat_region 13234550..13234607 FT /rpt_family="MIR" FT repeat_region 13234617..13234726 FT /rpt_family="MIR" FT repeat_region 13234931..13235230 FT /rpt_family="AluSx" FT repeat_region complement(13235241..13235350) FT /rpt_family="FLAM_C" FT repeat_region 13235614..13235735 FT /rpt_family="AluJo" FT repeat_region complement(13235757..13235798) FT /rpt_family="MER4B" FT repeat_region 13235800..13235990 FT /rpt_family="AluJo" FT repeat_region complement(13235991..13236228) FT /rpt_family="MLT1A1" FT repeat_region complement(13236230..13236533) FT /rpt_family="AluSq" FT repeat_region complement(13236558..13236849) FT /rpt_family="AluSx" FT repeat_region complement(13236863..13237164) FT /rpt_family="AluSc" FT repeat_region complement(13237166..13237247) FT /rpt_family="MLT1A1" FT repeat_region complement(13237628..13237743) FT /rpt_family="LINE2" FT repeat_region 13237768..13237905 FT /rpt_family="AluJo" FT repeat_region 13238030..13238162 FT /rpt_family="AluJo" FT repeat_region complement(13238186..13238214) FT /rpt_family="POLY_A" FT repeat_region 13238229..13238515 FT /rpt_family="AluSx" FT repeat_region 13238516..13238673 FT /rpt_family="AluJo" FT repeat_region complement(13238941..13239053) FT /rpt_family="LINE2" FT repeat_region complement(13239054..13239346) FT /rpt_family="MLT1A2" FT repeat_region complement(13239936..13239992) FT /rpt_family="LINE2" FT repeat_region 13240687..13240770 FT /rpt_family="FLAM_A" FT repeat_region complement(13240814..13240888) FT /rpt_family="(CCAA)n" FT repeat_region complement(13240889..13241191) FT /rpt_family="AluJo" FT repeat_region complement(13241348..13241649) FT /rpt_family="AluSx" FT repeat_region complement(13242053..13242090) FT /rpt_family="MIR" FT repeat_region complement(13242472..13242505) FT /rpt_family="(CAAAA)n" FT misc_feature 13242511..13242565 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 61.000" FT repeat_region 13242949..13243242 FT /rpt_family="AluSx" FT repeat_region complement(13243243..13243277) FT /rpt_family="Alu" FT repeat_region complement(13243527..13243581) FT /rpt_family="L1P2" FT repeat_region 13244133..13244188 FT /rpt_family="Alu" FT repeat_region complement(13244213..13244329) FT /rpt_family="L1MC4" FT misc_feature 13353674..13394307 FT /note="Map and sequence oriented from p telomere to FT centromere. Cosmid R34275 overlaps BAC 246408 to the left FT by approx. 6 kb, and overlaps cosmid R30633 to the right by FT approx. 2 kb. Additional chr 19 map and sequence FT information may be obtained at: FT http://www-bio.llnl.gov/bbrp/genome/genome.html." FT gene complement(<13355996..>13394209) FT /gene="CACNA1A" FT /gene_synonym="Acetazolamide responsive hereditary FT paroxysmal cerebellar ataxia" FT /gene_synonym="APCA" FT /gene_synonym="CACNL1A4" FT /gene_synonym="EA2" FT /gene_synonym="familial periodic cerebellar ataxia/ FT hereditary paroxysmal cerebellar ataxia/ episodic" FT /gene_synonym="FHM" FT /gene_synonym="HPCA" FT /gene_synonym="MHP" FT /gene_synonym="MHP1" FT /gene_synonym="SCA6" FT /gene_synonym="spinocerebellar ataxia 6" FT /note="Calcium channel alpha1 subunit locus; calcium FT channel, voltage-dependent, P/Q type, alpha 1A subunit; FT migraine, hemiplegic 1" FT CDS complement(join(<13355996..13356079,13363805..13363915, FT 13365909..13366073,13368164..13368365,13370378..13370515, FT 13372264..13372424,13373548..13373647,13386664..13386770, FT 13387883..13387942,13394081..>13394209)) FT /codon_start=1 FT /gene="CACNA1A" FT /gene_synonym="Acetazolamide responsive hereditary FT paroxysmal cerebellar ataxia" FT /gene_synonym="APCA" FT /gene_synonym="CACNL1A4" FT /gene_synonym="EA2" FT /gene_synonym="familial periodic cerebellar ataxia/ FT hereditary paroxysmal cerebellar ataxia/ episodic" FT /gene_synonym="FHM" FT /gene_synonym="HPCA" FT /gene_synonym="MHP" FT /gene_synonym="MHP1" FT /gene_synonym="SCA6" FT /gene_synonym="spinocerebellar ataxia 6" FT /product="CACNL1A4" FT /note="calcium channel alpha1 subunit, partial CDS; FT neuronal calcium channel alpha 1A subunit isoform A-1; FT alpha1A-voltage-dependent calcium channel" FT /protein_id="AAC26839.1" FT /translation="LRRLCHYILNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVL FT RYFDYVFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTGNSKG FT KDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVA FT VQLFKGKFFHCTDESKEFEKDCRGKYLLYEKNEVKARDREWKKYEFHYDNVLWALLTLF FT TVSTGEGWPQVLKHSVDATFENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIIT FT FQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNKQSFQYRMWQFVVSPPFEYTI FT MAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFGILNYFRDAWN FT IFDFVTVLGSITDILVTEFG" FT repeat_region complement(13356484..13356783) FT /rpt_family="AluSx" FT repeat_region 13356936..13357043 FT /rpt_family="MIR" FT repeat_region complement(13357438..13357739) FT /rpt_family="AluY" FT repeat_region 13358226..13358530 FT /rpt_family="AluY" FT repeat_region 13358531..13358558 FT /rpt_family="(TAAA)n" FT repeat_region 13359108..13359240 FT /rpt_family="FLAM_C" FT repeat_region 13359375..13359675 FT /rpt_family="AluSx" FT repeat_region complement(13359784..13360082) FT /rpt_family="AluJo" FT repeat_region complement(13360172..13360468) FT /rpt_family="AluJb" FT repeat_region complement(13360877..13361173) FT /rpt_family="AluSx" FT repeat_region complement(13361177..13361209) FT /rpt_family="AT_rich" FT repeat_region complement(13361210..13361509) FT /rpt_family="AluSg" FT repeat_region 13361664..13361960 FT /rpt_family="AluSx" FT repeat_region 13362016..13362310 FT /rpt_family="AluY" FT repeat_region 13362325..13362572 FT /rpt_family="MER80" FT repeat_region complement(13362583..13362879) FT /rpt_family="AluSq" FT repeat_region complement(13362886..13363187) FT /rpt_family="AluJo" FT repeat_region complement(13363202..13363503) FT /rpt_family="AluSp" FT repeat_region complement(13364131..13364249) FT /rpt_family="FLAM_A" FT repeat_region complement(13364261..13364556) FT /rpt_family="AluY" FT repeat_region complement(13364557..13364852) FT /rpt_family="AluSx" FT repeat_region complement(13364855..13365075) FT /rpt_family="MIR" FT repeat_region complement(13365174..13365475) FT /rpt_family="AluSp" FT repeat_region complement(13365671..13365829) FT /rpt_family="LINE2" FT repeat_region complement(13366328..13366433) FT /rpt_family="MIR" FT repeat_region complement(13366473..13366611) FT /rpt_family="(GGGA)n" FT repeat_region complement(13366612..13366660) FT /rpt_family="(GGAA)n" FT repeat_region complement(13366684..13366807) FT /rpt_family="(GGAA)n" FT repeat_region complement(13366808..13367111) FT /rpt_family="AluJo" FT repeat_region complement(13367303..13367603) FT /rpt_family="AluJo" FT repeat_region 13368382..13368496 FT /rpt_family="(GA)n" FT repeat_region complement(13368551..13368853) FT /rpt_family="AluSq" FT repeat_region complement(13368916..13369062) FT /rpt_family="MIR" FT repeat_region complement(13369746..13369921) FT /rpt_family="FRAM" FT repeat_region complement(13369954..13370285) FT /rpt_family="AluSx" FT repeat_region 13371054..13371147 FT /rpt_family="(TA)n" FT repeat_region complement(13371162..13371461) FT /rpt_family="AluY" FT repeat_region complement(13371474..13371764) FT /rpt_family="AluJo" FT misc_feature complement(13372278..13372424) FT /gene="CACNA1A" FT /gene_synonym="Acetazolamide responsive hereditary FT paroxysmal cerebellar ataxia" FT /gene_synonym="APCA" FT /gene_synonym="CACNL1A4" FT /gene_synonym="EA2" FT /gene_synonym="familial periodic cerebellar ataxia/ FT hereditary paroxysmal cerebellar ataxia/ episodic" FT /gene_synonym="FHM" FT /gene_synonym="HPCA" FT /gene_synonym="MHP" FT /gene_synonym="MHP1" FT /gene_synonym="SCA6" FT /gene_synonym="spinocerebellar ataxia 6" FT /note="DDS similarity to AA297200 EST113034 Fetal brain I FT Homo sapiens cDNA 5' end similar to calcium channel, alpha FT 1 subunit; (169..315); 99% identity." FT repeat_region complement(13372895..13373004) FT /rpt_family="FLAM_C" FT misc_feature complement(13373548..13373715) FT /gene="CACNA1A" FT /gene_synonym="Acetazolamide responsive hereditary FT paroxysmal cerebellar ataxia" FT /gene_synonym="APCA" FT /gene_synonym="CACNL1A4" FT /gene_synonym="EA2" FT /gene_synonym="familial periodic cerebellar ataxia/ FT hereditary paroxysmal cerebellar ataxia/ episodic" FT /gene_synonym="FHM" FT /gene_synonym="HPCA" FT /gene_synonym="MHP" FT /gene_synonym="MHP1" FT /gene_synonym="SCA6" FT /gene_synonym="spinocerebellar ataxia 6" FT /note="DDS similarity to AA297200 EST113034 Fetal brain I FT Homo sapiens cDNA 5' end similar to calcium channel, alpha FT 1 subunit; (1..168); 100% identity." FT repeat_region complement(13373982..13374282) FT /rpt_family="AluJb" FT repeat_region complement(13374336..13374634) FT /rpt_family="AluSq" FT repeat_region 13375024..13375112 FT /rpt_family="LINE2" FT repeat_region 13375402..13375480 FT /rpt_family="LINE2" FT repeat_region complement(13375690..13375987) FT /rpt_family="AluSx" FT repeat_region complement(13376660..13376957) FT /rpt_family="AluSp" FT repeat_region complement(13377061..13377192) FT /rpt_family="FRAM" FT repeat_region complement(13377386..13377688) FT /rpt_family="AluSx" FT repeat_region 13377930..13377991 FT /rpt_family="(GA)n" FT repeat_region 13378475..13378591 FT /rpt_family="FLAM_C" FT repeat_region complement(13378596..13378872) FT /rpt_family="AluJb" FT repeat_region complement(13379249..13379546) FT /rpt_family="AluY" FT repeat_region complement(13379714..13379811) FT /rpt_family="Alu" FT repeat_region complement(13379812..13379980) FT /rpt_family="FRAM" FT repeat_region complement(13380076..13380199) FT /rpt_family="MIR" FT repeat_region 13380991..13381028 FT /rpt_family="MIR" FT repeat_region complement(13381008..13381060) FT /rpt_family="MIR" FT repeat_region complement(13382033..13382333) FT /rpt_family="AluSx" FT repeat_region complement(13382581..13382897) FT /rpt_family="AluSx" FT repeat_region 13383399..13383521 FT /rpt_family="(GA)n" FT repeat_region 13383498..13383607 FT /rpt_family="(GGGA)n" FT repeat_region complement(13383780..13384079) FT /rpt_family="AluSx" FT misc_feature complement(13384249..13384539) FT /gene="CACNA1A" FT /gene_synonym="Acetazolamide responsive hereditary FT paroxysmal cerebellar ataxia" FT /gene_synonym="APCA" FT /gene_synonym="CACNL1A4" FT /gene_synonym="EA2" FT /gene_synonym="familial periodic cerebellar ataxia/ FT hereditary paroxysmal cerebellar ataxia/ episodic" FT /gene_synonym="FHM" FT /gene_synonym="HPCA" FT /gene_synonym="MHP" FT /gene_synonym="MHP1" FT /gene_synonym="SCA6" FT /gene_synonym="spinocerebellar ataxia 6" FT /note="BLASTN similarity to AQ039449 (356..646); match: FT 0.98, score: 1.4e-113; database searched: month.na; FT CIT-HSP-2337H4.TR CIT-HSP Homo sapiens genomic clone FT 2337H4" FT repeat_region complement(13384411..13384450) FT /rpt_family="(TAAA)n" FT repeat_region complement(13384556..13384855) FT /rpt_family="AluJo" FT repeat_region 13384896..13385000 FT /rpt_family="(GAAA)n" FT repeat_region 13387003..13387451 FT /rpt_family="LINE2" FT repeat_region complement(13387512..13387825) FT /rpt_family="AluSx" FT repeat_region 13388620..13388915 FT /rpt_family="AluSx" FT repeat_region 13388991..13389560 FT /rpt_family="LINE2" FT repeat_region 13389881..13389913 FT /rpt_family="MIR" FT repeat_region 13389922..13389966 FT /rpt_family="(GGAA)n" FT repeat_region 13390124..13390278 FT /rpt_family="L1M4" FT repeat_region complement(13390298..13390604) FT /rpt_family="AluSx" FT repeat_region complement(13390622..13390886) FT /rpt_family="AluSx" FT repeat_region complement(13390996..13391306) FT /rpt_family="AluJb" FT repeat_region 13391473..13391774 FT /rpt_family="AluSx" FT repeat_region 13391930..13392211 FT /rpt_family="AluJo" FT repeat_region complement(13392287..13392459) FT /rpt_family="MER20" FT repeat_region 13393418..13393588 FT /rpt_family="MIR" FT repeat_region complement(13482974..13483285) FT /rpt_family="AluSx" FT repeat_region 13483337..13483527 FT /rpt_family="MIR" FT repeat_region complement(13483968..13484169) FT /rpt_family="AluJo" FT repeat_region complement(13485060..13485363) FT /rpt_family="AluJo" FT repeat_region complement(13485654..13485783) FT /rpt_family="FLAM_C" FT repeat_region 13485785..13486319 FT /rpt_family="TIGGER1" FT repeat_region 13486320..13486619 FT /rpt_family="AluJo" FT repeat_region 13486644..13487358 FT /rpt_family="TIGGER1" FT repeat_region complement(13487359..13487435) FT /rpt_family="AT_rich" FT repeat_region 13487526..13487640 FT /rpt_family="(TA)n" FT repeat_region complement(13487674..13487787) FT /rpt_family="(TA)n" FT repeat_region complement(13487788..13488075) FT /rpt_family="AluSq" FT repeat_region 13488078..13488187 FT /rpt_family="TIGGER1" FT repeat_region complement(13488188..13488476) FT /rpt_family="AluSx" FT repeat_region 13488477..13488661 FT /rpt_family="TIGGER1" FT repeat_region 13488669..13488792 FT /rpt_family="AluJb" FT repeat_region 13488818..13489463 FT /rpt_family="TIGGER1" FT repeat_region complement(13489477..13489782) FT /rpt_family="AluSx" FT repeat_region complement(13489786..13490088) FT /rpt_family="AluJo" FT repeat_region 13490096..13490281 FT /rpt_family="TIGGER1" FT repeat_region 13490458..13490756 FT /rpt_family="AluSc" FT repeat_region 13490819..13491116 FT /rpt_family="AluSc" FT repeat_region 13491179..13491479 FT /rpt_family="AluSx" FT repeat_region complement(13491483..13491542) FT /rpt_family="MER33" FT repeat_region complement(13491543..13491587) FT /rpt_family="(TAAA)n" FT repeat_region complement(13491588..13491889) FT /rpt_family="AluJb" FT repeat_region 13491918..13492227 FT /rpt_family="AluJo" FT repeat_region complement(13492291..13492340) FT /rpt_family="MER33" FT repeat_region complement(13492355..13492459) FT /rpt_family="LINE2" FT repeat_region 13492476..13492559 FT /rpt_family="LINE2" FT repeat_region complement(13492575..13492902) FT /rpt_family="LINE2" FT repeat_region complement(13493651..13493734) FT /rpt_family="MIR" FT repeat_region complement(13493921..13493966) FT /rpt_family="LINE2" FT repeat_region complement(13494016..13494066) FT /rpt_family="LINE2" FT repeat_region complement(13494095..13494254) FT /rpt_family="LINE2" FT repeat_region 13494259..13494583 FT /rpt_family="LINE2" FT repeat_region complement(13494628..13494929) FT /rpt_family="AluJb" FT repeat_region 13494931..13495008 FT /rpt_family="LINE2" FT repeat_region 13495230..13495521 FT /rpt_family="AluSq" FT misc_feature complement(13495589..13495677) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 67.000" FT repeat_region complement(13495815..13495988) FT /rpt_family="MER3" FT repeat_region complement(13496042..13496341) FT /rpt_family="AluSg" FT repeat_region complement(13496342..13496471) FT /rpt_family="FLAM_A" FT repeat_region complement(13496477..13496509) FT /rpt_family="AT_rich" FT repeat_region 13496515..13496603 FT /rpt_family="LINE2" FT repeat_region 13496691..13496984 FT /rpt_family="AluJo" FT repeat_region 13497321..13497624 FT /rpt_family="AluSx" FT repeat_region complement(13497772..13498069) FT /rpt_family="AluSx" FT repeat_region complement(13498126..13498277) FT /rpt_family="MIR" FT repeat_region 13498571..13498678 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(13499068..13499359) FT /rpt_family="AluSx" FT misc_feature complement(13499536..13499704) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 57.000" FT repeat_region complement(13499712..13500015) FT /rpt_family="AluSq" FT repeat_region complement(13500625..13500922) FT /rpt_family="AluSg" FT repeat_region complement(13500931..13501223) FT /rpt_family="AluJo" FT repeat_region 13501243..13501447 FT /rpt_family="MER3" FT repeat_region complement(13501499..13501705) FT /rpt_family="MIR" FT repeat_region complement(13501709..13501998) FT /rpt_family="AluSc" FT repeat_region 13502430..13502566 FT /rpt_family="AluJo" FT repeat_region 13502569..13502864 FT /rpt_family="AluJb" FT repeat_region 13502865..13503043 FT /rpt_family="AluJo" FT repeat_region 13503407..13503476 FT /rpt_family="L1ME3A" FT repeat_region complement(13503477..13503504) FT /rpt_family="(GGAA)n" FT repeat_region complement(13503555..13503882) FT /rpt_family="AluSx" FT repeat_region 13503883..13504261 FT /rpt_family="L1ME3A" FT repeat_region complement(13504307..13504444) FT /rpt_family="(GGAA)n" FT repeat_region complement(13504425..13504656) FT /rpt_family="(GAAA)n" FT repeat_region complement(13504657..13504752) FT /rpt_family="AluSp/q" FT repeat_region 13504757..13504878 FT /rpt_family="L1ME3A" FT repeat_region complement(13504899..13505088) FT /rpt_family="MIR" FT repeat_region complement(13505535..13505799) FT /rpt_family="MER39b_j" FT repeat_region 13505800..13506107 FT /rpt_family="AluSx" FT repeat_region 13506138..13506445 FT /rpt_family="AluSx" FT repeat_region complement(13506446..13506565) FT /rpt_family="MER39b_j" FT repeat_region complement(13506568..13506643) FT /rpt_family="MER39b_j" FT repeat_region complement(13506649..13506930) FT /rpt_family="MER39b_j" FT repeat_region 13507269..13507471 FT /rpt_family="MER3" FT misc_feature 13507566..13507782 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 62.000" FT repeat_region 13508794..13509096 FT /rpt_family="AluSq" FT repeat_region 13509243..13509356 FT /rpt_family="LINE2" FT repeat_region 13509445..13509648 FT /rpt_family="MIR" FT repeat_region 13510202..13510270 FT /rpt_family="(GAA)n" FT repeat_region 13510770..13510854 FT /rpt_family="MIR" FT misc_feature 13510934..13511009 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 56.000" FT repeat_region 13511433..13511626 FT /rpt_family="MER20" FT repeat_region complement(13511656..13511928) FT /rpt_family="AluSx" FT repeat_region 13512058..13512255 FT /rpt_family="MIR" FT repeat_region complement(13512659..13512790) FT /rpt_family="FLAM_C" FT repeat_region 13513167..13513351 FT /rpt_family="L1PB1" FT repeat_region 13513534..13513672 FT /rpt_family="(TA)n" FT repeat_region complement(13513674..13513730) FT /rpt_family="(TA)n" FT repeat_region 13513789..13513851 FT /rpt_family="LINE2" FT repeat_region 13514015..13514081 FT /rpt_family="LINE2" FT repeat_region complement(13514093..13514277) FT /rpt_family="MIR" FT repeat_region 13514470..13514785 FT /rpt_family="AluJb" FT repeat_region 13514815..13514968 FT /rpt_family="MIR" FT repeat_region 13514969..13515020 FT /rpt_family="(TA)n" FT repeat_region complement(13515720..13516009) FT /rpt_family="AluSx" FT repeat_region complement(13516011..13516319) FT /rpt_family="AluJo" FT repeat_region complement(13516360..13516568) FT /rpt_family="MIR" FT repeat_region complement(13516633..13516739) FT /rpt_family="MIR" FT repeat_region 13516848..13516972 FT /rpt_family="AluJb" FT repeat_region 13516987..13517278 FT /rpt_family="AluSx" FT repeat_region complement(13517280..13517326) FT /rpt_family="(TA)n" FT repeat_region 13517569..13517729 FT /rpt_family="LINE2" FT repeat_region 13517733..13517819 FT /rpt_family="(CA)n" FT repeat_region 13517864..13517927 FT /rpt_family="MIR" FT repeat_region 13518233..13518363 FT /rpt_family="MIR" FT repeat_region 13518535..13518625 FT /rpt_family="AluJb" FT misc_feature 14200888 FT /note="NOTE: Forced join at 127453. Shatter libraries FT failed to resolve GC rich region." FT misc_feature 14325718..14327031 FT /note="NOTE: Shatter libraries failed to resolve FT dinucleotide repeat region 45898-47211. Unsure number of FT repeat copies 45898-47211. Forced join 46439" FT misc_feature 14706609..14707036 FT /note="PCR shatter library only 4615-5042." FT CDS complement(join(<14865764..14865805,14876165..14876209, FT 14876336..14876382,14876470..14876616,14877047..14877194, FT 14877821..14877921,14883154..14883310,14884766..14884866, FT 14885068..14885119,14887548..14887568)) FT /codon_start=1 FT /gene="CD97" FT /product="CD97_HUMAN, partial CDS" FT /note="leucocyte antigen cd97 precursor; FT seven-transmembrane, heterodimeric receptor associated with FT inflammation; seven-span transmembrane protein" FT /protein_id="AAC27673.1" FT /translation="MGGRVFLAFCVWLTLPGAETQDSRGCARWCPQDSSCVNATACRCN FT PGFSSFSEIITTPDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNE FT SENTCQDVDECQQNPRLCKSYGTCVNTLGSYTCQCLPGFKDVNECTSGQNPCHSSTHCL FT NNVGSYQCRCRPGWQPIPGSPNGPNNTVCEDVDECSSGQHQCDSSTVCFNTVGSYSCRC FT RPGWKPRHGIPNNQKDTVCEDMTFSTWTPPPGVHSQTLSRFFDKVQDLGRDHLSSFAVL FT MAHYDV" FT repeat_region complement(14869711..14870235) FT /rpt_family="LTR9" FT repeat_region 14870238..14870299 FT /rpt_family="L1MA4A" FT repeat_region complement(14870316..14870601) FT /rpt_family="AluSx" FT repeat_region complement(14870629..14870929) FT /rpt_family="AluY" FT repeat_region 14870931..14871162 FT /rpt_family="L1MA4A" FT repeat_region 14871178..14871423 FT /rpt_family="L1MB5" FT repeat_region 14871426..14871930 FT /rpt_family="MER4B" FT repeat_region 14871934..14872236 FT /rpt_family="AluY" FT repeat_region 14872272..14872896 FT /rpt_family="LTR9" FT repeat_region 14872897..14872953 FT /rpt_family="MER4D" FT repeat_region 14873018..14873451 FT /rpt_family="L1MB5" FT repeat_region complement(14873455..14873741) FT /rpt_family="AluSx" FT repeat_region 14873763..14873821 FT /rpt_family="L1MB6" FT repeat_region 14873868..14874174 FT /rpt_family="AluY" FT repeat_region complement(14874364..14874491) FT /rpt_family="(GAAA)n" FT repeat_region complement(14874494..14874542) FT /rpt_family="(GGA)n" FT repeat_region complement(14874543..14874662) FT /rpt_family="(GGA)n" FT repeat_region complement(14874663..14874750) FT /rpt_family="(GGA)n" FT repeat_region complement(14874754..14874872) FT /rpt_family="(GAA)n" FT repeat_region complement(14874874..14875097) FT /rpt_family="AluJo" FT repeat_region 14875549..14875836 FT /rpt_family="AluSc" FT repeat_region complement(14878049..14878350) FT /rpt_family="AluY" FT repeat_region complement(14878825..14878891) FT /rpt_family="MSTA" FT repeat_region 14879920..14880059 FT /rpt_family="AluSq/x" FT repeat_region complement(14880510..14880809) FT /rpt_family="AluY" FT repeat_region 14880878..14881296 FT /rpt_family="MSTA" FT repeat_region complement(14881444..14881489) FT /rpt_family="POLY_A" FT repeat_region complement(14881490..14881791) FT /rpt_family="AluSx" FT repeat_region complement(14882453..14882728) FT /rpt_family="AluSc" FT repeat_region complement(14882763..14882991) FT /rpt_family="MIR" FT repeat_region 14883611..14883910 FT /rpt_family="AluSx" FT repeat_region 14883912..14883952 FT /rpt_family="POLY_A" FT repeat_region complement(14884095..14884215) FT /rpt_family="(GGAA)n" FT repeat_region complement(14884218..14884265) FT /rpt_family="AluSp/q" FT repeat_region complement(14884270..14884315) FT /rpt_family="AluSc" FT repeat_region complement(14884322..14884595) FT /rpt_family="AluJo" FT repeat_region complement(14885321..14885476) FT /rpt_family="FRAM" FT repeat_region complement(14885486..14885784) FT /rpt_family="AluSx" FT repeat_region complement(14885813..14886116) FT /rpt_family="AluSx" FT repeat_region complement(14886143..14886234) FT /rpt_family="FLAM_A" FT repeat_region 14886389..14886689 FT /rpt_family="AluSx" FT repeat_region 14886992..14887103 FT /rpt_family="(GA)n" FT repeat_region 14887789..14887840 FT /rpt_family="(CA)n" FT repeat_region 14888160..14888276 FT /rpt_family="AluJb" FT repeat_region complement(14888284..14888311) FT /rpt_family="AT_rich" FT repeat_region complement(14888317..14888948) FT /rpt_family="L1PA2" FT repeat_region 14888949..14889239 FT /rpt_family="AluJo" FT repeat_region complement(14889535..14889742) FT /rpt_family="AluJo" FT repeat_region complement(14889748..14889890) FT /rpt_family="MIR" FT repeat_region complement(14890618..14890797) FT /rpt_family="AluSq" FT repeat_region complement(14890816..14891118) FT /rpt_family="AluSx" FT repeat_region complement(14891125..14891162) FT /rpt_family="(TAA)n" FT repeat_region complement(14891163..14891462) FT /rpt_family="AluSx" FT repeat_region 14891913..14892058 FT /rpt_family="AluSg/x" FT repeat_region complement(14892122..14892295) FT /rpt_family="AluJb" FT repeat_region complement(14892299..14892595) FT /rpt_family="AluSx" FT repeat_region 14892808..14893102 FT /rpt_family="AluSq" FT repeat_region 14893103..14893140 FT /rpt_family="(TAAA)n" FT repeat_region 14893146..14893450 FT /rpt_family="AluJo" FT repeat_region complement(14893592..14893618) FT /rpt_family="AT_rich" FT repeat_region complement(14893704..14893898) FT /rpt_family="AluSg/x" FT repeat_region 14894060..14894356 FT /rpt_family="AluJb" FT repeat_region 14895010..14895128 FT /rpt_family="L1M4" FT repeat_region complement(14895147..14895459) FT /rpt_family="AluSx" FT repeat_region 14896261..14896513 FT /rpt_family="LINE2" FT repeat_region complement(14896527..14896836) FT /rpt_family="AluSx" FT repeat_region complement(14896855..14897003) FT /rpt_family="AluJb" FT repeat_region complement(14897688..14897809) FT /rpt_family="MIR" FT repeat_region complement(14897849..14898115) FT /rpt_family="AluSx" FT repeat_region complement(14898523..14898812) FT /rpt_family="AluSc" FT repeat_region complement(14898917..14899200) FT /rpt_family="AluSx" FT repeat_region complement(14899881..14899917) FT /rpt_family="AT_rich" FT repeat_region complement(14900079..14900111) FT /rpt_family="AT_rich" FT repeat_region complement(14900262..14900559) FT /rpt_family="AluSp" FT repeat_region 14900971..14901195 FT /rpt_family="MER58A" FT repeat_region complement(14901212..14901657) FT /rpt_family="L1MC4" FT repeat_region 14902556..14903073 FT /rpt_family="L1ME1" FT repeat_region 14903780..14904470 FT /rpt_family="L1ME1" FT repeat_region 14904471..14904766 FT /rpt_family="AluSq" FT repeat_region 14904767..14905039 FT /rpt_family="L1ME1" FT repeat_region complement(14905054..14905442) FT /rpt_family="LINE2" FT repeat_region complement(14906088..14906536) FT /rpt_family="LTR8" FT repeat_region complement(14906553..14906854) FT /rpt_family="AluY" FT repeat_region complement(14906855..14907132) FT /rpt_family="LTR8" FT repeat_region 14907167..14907472 FT /rpt_family="AluSc" FT repeat_region 14908028..14908332 FT /rpt_family="AluY" FT repeat_region 14908376..14908556 FT /rpt_family="MER58A" FT repeat_region 14908636..14908705 FT /rpt_family="MLT1C" FT repeat_region 14908817..14909213 FT /rpt_family="MLT1C" FT repeat_region complement(14909241..14909878) FT /rpt_family="LTR9" FT CDS complement(14909986..14910948) FT /codon_start=1 FT /product="BC85395_1" FT /note="Hypothetical OLFR protein; Predicted ORF contains FT human fragment tpcr86 (pir||S58004) from residues 126 to FT 282, and is 98% identical to tpcr86 over this region" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC25625.1" FT /translation="METGNQTHAQEFLLLGFSATSEIQFILFGLFLSMYLVTFTGNLLI FT ILAICSDSHLHTPMYFFLSNLSFADLCFTSTTVPKMLLNILTQNKFITYAGCLSQIFFF FT TSFGCLDNLLLTVMAYDRFVAVCHPLHYTVIMNPQLCGLLVLGSWCISVMGSLLETLTV FT LRLSFCTEMEIPHFFCDLLEVLKLACSDTFINNVVIYFATGVLGVISFTGIFFSYYKIV FT FSILRISSAGRKHKAFSTCGSHLSVVTLFYGTGFGVYLSSAATPSSRTSLVASVMYTMV FT TPMLNPFIYSLRNTDMKRALGRLLSRATFFNGDITAGLS" FT mRNA complement(14910103..14910574) FT /product="H.sapiens mRNA for TPCR86 protein" FT repeat_region 14911186..14911273 FT /rpt_family="MER5A" FT repeat_region 14911315..14911912 FT /rpt_family="LTR9" FT repeat_region complement(14912436..14912819) FT /rpt_family="THE1C" FT repeat_region 14913050..14913351 FT /rpt_family="AluSq" FT repeat_region 14913497..14913602 FT /rpt_family="L1M4" FT repeat_region complement(14913614..14913834) FT /rpt_family="LTR9" FT repeat_region 14913837..14914138 FT /rpt_family="AluSx" FT repeat_region complement(14914143..14914513) FT /rpt_family="LTR9" FT repeat_region complement(14914528..14914820) FT /rpt_family="AluY" FT repeat_region 14914854..14915350 FT /rpt_family="L1M4" FT repeat_region 14915437..14915690 FT /rpt_family="L1MB5" FT repeat_region complement(14915693..14915846) FT /rpt_family="AluJb" FT repeat_region complement(14916226..14916526) FT /rpt_family="AluSx" FT repeat_region complement(14917198..14918065) FT /rpt_family="L1PA8" FT repeat_region 14918481..14918726 FT /rpt_family="AluY" FT repeat_region complement(14918771..14918836) FT /rpt_family="L1M2" FT repeat_region 14918834..14919589 FT /rpt_family="L1PB3" FT repeat_region 14920332..14920462 FT /rpt_family="(GAA)n" FT misc_feature complement(14920622..14920805) FT /note="predicted exon, program: 0, frame: 0, quality: good, FT score: 56.000" FT repeat_region complement(14921190..14921496) FT /rpt_family="AluY" FT repeat_region 14921824..14921959 FT /rpt_family="MER58B" FT repeat_region complement(14921961..14922416) FT /rpt_family="MLT1C" FT repeat_region 14922426..14922500 FT /rpt_family="MER58A" FT repeat_region complement(14922657..14922775) FT /rpt_family="MER1A" FT repeat_region 14923107..14923527 FT /rpt_family="LTR2" FT repeat_region 14923535..14923590 FT /rpt_family="L1" FT repeat_region 14923594..14923901 FT /rpt_family="AluSx" FT repeat_region complement(14924045..14924084) FT /rpt_family="THE1C" FT repeat_region 14924086..14924376 FT /rpt_family="AluY" FT repeat_region complement(14924380..14924710) FT /rpt_family="THE1C" FT repeat_region 14924740..14925229 FT /rpt_family="L1" FT repeat_region complement(14925235..14925536) FT /rpt_family="AluSq" FT repeat_region 14925553..14926408 FT /rpt_family="MER49" FT repeat_region complement(14926578..14926649) FT /rpt_family="(CA)n" FT repeat_region complement(14926650..14926926) FT /rpt_family="AluJb" FT repeat_region 14926976..14927018 FT /rpt_family="L1MA2" FT repeat_region 14927053..14927599 FT /rpt_family="MLT2A" FT repeat_region 14927654..14927681 FT /rpt_family="AT_rich" FT repeat_region complement(14928045..14928232) FT /rpt_family="L1PA8" FT repeat_region complement(14928747..14928767) FT /rpt_family="AT_rich" FT repeat_region complement(14928866..14928899) FT /rpt_family="(TAAA)n" FT repeat_region complement(14928900..14929204) FT /rpt_family="AluY" FT repeat_region complement(14929731..14929932) FT /rpt_family="L1PA4" FT repeat_region complement(14929979..14930411) FT /rpt_family="L1PA9" FT repeat_region complement(14930721..14931021) FT /rpt_family="AluSx" FT repeat_region 14931157..14931379 FT /rpt_family="L1PA8" FT repeat_region complement(14931435..14931566) FT /rpt_family="LINE2" FT repeat_region 14931784..14932070 FT /rpt_family="AluSq" FT repeat_region complement(14932701..14933190) FT /rpt_family="L1MA7" FT repeat_region complement(14933195..14933493) FT /rpt_family="AluSg" FT repeat_region complement(14933496..14933967) FT /rpt_family="L1MA7" FT repeat_region 14933983..14934283 FT /rpt_family="AluSx" FT repeat_region complement(14934285..14934585) FT /rpt_family="L1PB3" FT repeat_region complement(14934584..14934814) FT /rpt_family="L1MA7" FT repeat_region complement(14935041..14935663) FT /rpt_family="L1PA13" FT repeat_region 14935641..14935752 FT /rpt_family="L1MA9" FT repeat_region 14935767..14936063 FT /rpt_family="AluJo" FT repeat_region 14936064..14936293 FT /rpt_family="L1MA9" FT repeat_region 14936635..14936711 FT /rpt_family="MLT1F" FT mRNA complement(14937139..14939276) FT /product="H.sapiens mRNA encoding putative olfactory FT receptor (clone htpcr2)" FT CDS complement(14938094..14939053) FT /codon_start=1 FT /product="BC85395_2" FT /note="Hypothetical human OLFR protein; Hypothetical FT protein is 100% identical to putative olfactory receptor FT encoded by clone htpcr2 (Y10530)" FT /protein_id="AAC25626.1" FT /translation="MEPGNDTQISEFLLLGFSQEPGLQPFLFGLFLSMYLVTVLGNLLI FT ILATISDSHLHTPMYFFLSNLSFADICVTSTTIPKMLMNIQTQNKVITYIACLMQMYFF FT ILFAGFENFLLSVMAYDRFVAICHPLHYMVIMNPHLCGLLVLASWTMSALYSLLQILMV FT VRLSFCTALEIPHFFCELNQVIQLACSDSFLNHMVIYFTVALLGGGPLTGILYSYSKII FT SSIHAISSAQGKYKAFSTCASHLSVVSLFYGAILGVYLSSAATRNSHSSATASVMYTVV FT TPMLNPFIYSLRNKDIKRALGIHLLWGTMKGQFFKKCP" FT repeat_region 14939291..14939590 FT /rpt_family="AluSc" FT repeat_region complement(14939621..14940006) FT /rpt_family="LINE2" FT repeat_region complement(14940015..14940312) FT /rpt_family="AluSx" FT repeat_region 14940648..14940701 FT /rpt_family="(CA)n" FT repeat_region complement(14940714..14940966) FT /rpt_family="AluJo" FT repeat_region complement(14941203..14941306) FT /rpt_family="MER83" FT repeat_region 14941536..14941980 FT /rpt_family="MER83" FT repeat_region complement(14942257..14942554) FT /rpt_family="AluY" FT repeat_region complement(14942721..14943021) FT /rpt_family="AluJo" FT repeat_region complement(14943179..14943236) FT /rpt_family="(GAAA)n" FT repeat_region complement(14943237..14943535) FT /rpt_family="AluSc" FT repeat_region complement(14943575..14943601) FT /rpt_family="AT_rich" FT repeat_region complement(14943690..14943730) FT /rpt_family="AT_rich" FT repeat_region 14943782..14943823 FT /rpt_family="LINE2" FT repeat_region 14944009..14944307 FT /rpt_family="AluSx" FT repeat_region 14944790..14945109 FT /rpt_family="AluJb" FT repeat_region complement(14945155..14945249) FT /rpt_family="MER20" FT repeat_region 14945450..14945581 FT /rpt_family="LINE2" FT repeat_region complement(14946425..14946722) FT /rpt_family="AluSx" FT repeat_region 14947171..14947461 FT /rpt_family="AluSx" FT repeat_region 14947467..14947633 FT /rpt_family="MER20" FT repeat_region complement(14947775..14948071) FT /rpt_family="THE1B" FT repeat_region 14948071..14948692 FT /rpt_family="LTR9" FT repeat_region 14948692..14948769 FT /rpt_family="MSTD" FT repeat_region complement(14949196..14949484) FT /rpt_family="AluSx" FT repeat_region 14949723..14949752 FT /rpt_family="AT_rich" FT repeat_region 14949942..14950240 FT /rpt_family="AluY" FT repeat_region 14950317..14950373 FT /rpt_family="MLT1A2" FT CDS complement(14951760..14952689) FT /codon_start=1 FT /product="BC85395_3" FT /note="Hypothetical human OLFR protein; Hypothetical FT protein is 82% identical to human OLF4" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC25627.1" FT /translation="MKSWNNTIILEFLLLGISEEPELQAFLFGLFLSMYLVTVLGNLLI FT ILATISDSHLHTPMYFFLSNLSFVDICFVSTTVPKMLVNIQTHNKVITYAGCITQMCFF FT LLFVGLDNFLLTVMAYDRFVAICHPLHYMVIMNPQLCGLLVLASWIMSVLNSMLQSLMV FT LPLPFCTHMEIPHFFCEINQVVHLACSDTFLNDIVMYFAVALLGGGPLTGILYSYSKIV FT SSIRAISSAQGKYKAFSTCASHLSVVSLFYGTCLGVYLSSAATHNSHTGAAASVMYTVV FT TPMLNPFIYSLRNKHIKGAMKTFFRGKQ" FT repeat_region 14952707..14952741 FT /rpt_family="(GA)n" FT repeat_region complement(14952893..14953061) FT /rpt_family="L1PA15" FT repeat_region complement(14953063..14953350) FT /rpt_family="AluSx" FT repeat_region complement(14953362..14953752) FT /rpt_family="L1PA15" FT repeat_region 14953758..14954106 FT /rpt_family="L1PA15" FT repeat_region complement(14954101..14954380) FT /rpt_family="L1MA7" FT repeat_region 14954593..14954890 FT /rpt_family="L1PA8" FT repeat_region complement(14955009..14955310) FT /rpt_family="LINE2" FT repeat_region complement(14955477..14955774) FT /rpt_family="AluSx" FT repeat_region 14955864..14955922 FT /rpt_family="(CA)n" FT repeat_region 14956005..14956301 FT /rpt_family="AluSx" FT repeat_region complement(14956625..14956673) FT /rpt_family="MER20" FT repeat_region 14956713..14956976 FT /rpt_family="AluSg" FT repeat_region 14957227..14957326 FT /rpt_family="(TAAAA)n" FT repeat_region 14957369..14957541 FT /rpt_family="AluSg/x" FT repeat_region complement(14958321..14958625) FT /rpt_family="AluY" FT repeat_region 14958655..14958946 FT /rpt_family="AluSg" FT repeat_region complement(14959990..14960145) FT /rpt_family="L1MA8" FT repeat_region complement(14960154..14960264) FT /rpt_family="(GAA)n" FT repeat_region complement(14960268..14960511) FT /rpt_family="AluSc" FT repeat_region complement(14960514..14960975) FT /rpt_family="L1MA8" FT repeat_region 14961318..14961380 FT /rpt_family="(CA)n" FT repeat_region complement(14961679..14962264) FT /rpt_family="L1MA4" FT repeat_region complement(14962275..14962574) FT /rpt_family="AluSx" FT exon 14962844..14963756 FT /pseudo FT /standard_name="OLF4-like" FT repeat_region complement(14963886..14964211) FT /rpt_family="L1MA8" FT repeat_region complement(14964435..14964802) FT /rpt_family="LINE2" FT repeat_region complement(14964957..14965259) FT /rpt_family="AluSg" FT repeat_region 14965500..14965552 FT /rpt_family="(CAAT)n" FT misc_feature complement(14965664..14965747) FT /note="predicted exon, program: 0, frame: 1, quality: FT excellent, score: 85.000" FT repeat_region complement(14966041..14966336) FT /rpt_family="AluSx" FT repeat_region complement(14966480..14966524) FT /rpt_family="L1" FT repeat_region 14966728..14967036 FT /rpt_family="AluSq" FT repeat_region complement(14967113..14967275) FT /rpt_family="L1" FT repeat_region complement(14967281..14967581) FT /rpt_family="AluY" FT repeat_region complement(14967582..14967774) FT /rpt_family="L1" FT repeat_region complement(14967773..14968104) FT /rpt_family="L1MA1" FT repeat_region complement(14968131..14968426) FT /rpt_family="AluSx" FT repeat_region complement(14968428..14968923) FT /rpt_family="L1MA1" FT repeat_region 14968933..14969155 FT /rpt_family="AluSx" FT repeat_region 14970204..14970611 FT /rpt_family="L1MA7" FT repeat_region 14970837..14970909 FT /rpt_family="(TA)n" FT repeat_region 14971179..14971270 FT /rpt_family="MER20" FT repeat_region complement(14971358..14971451) FT /rpt_family="MER5A" FT repeat_region 14971649..14971937 FT /rpt_family="AluSg" FT repeat_region 14971947..14972042 FT /rpt_family="MIR" FT repeat_region complement(14972216..14972242) FT /rpt_family="AT_rich" FT repeat_region 14973400..14973660 FT /rpt_family="AluY" FT repeat_region 14973675..14973699 FT /rpt_family="AT_rich" FT repeat_region complement(14974284..14974583) FT /rpt_family="AluSg" FT misc_feature complement(14974601..14975515) FT /note="BLASTX similarity to 2447219 (5..309); match: 0.8, FT score: 4.3e-169; database searched: nr; (AC002988) OLF4 FT [Homo sapiens]" FT misc_feature complement(14974682..14975152) FT /note="BLASTX similarity to (1..157); match: 0.74, score: FT 1.8e-79; database searched: nr; probable olfactory receptor FT tpcr15 - mouse (fragment) gi|902665 (X89683) putative FT olfactory receptor [Mus musculus]" FT misc_feature complement(14975058..14975540) FT /note="predicted exon, program: 0, frame: 0, quality: FT excellent, score: 88.000" FT repeat_region 14975548..14975614 FT /rpt_family="(CAAA)n" FT repeat_region complement(14975670..14975957) FT /rpt_family="AluSq" FT repeat_region 14976694..14976720 FT /rpt_family="(CAAA)n" FT repeat_region 14976756..14977198 FT /rpt_family="LTR19B" FT repeat_region 14977207..14977502 FT /rpt_family="AluSg" FT repeat_region 14977505..14977605 FT /rpt_family="LTR19B" FT misc_feature complement(14978485..14978659) FT /note="predicted exon, program: 0, frame: 0, quality: FT excellent, score: 86.000" FT repeat_region complement(14978780..14980493) FT /rpt_family="L1MA8" FT repeat_region complement(14980503..14980799) FT /rpt_family="AluSx" FT repeat_region complement(14980957..14981262) FT /rpt_family="LINE2" FT repeat_region 14981477..14981514 FT /rpt_family="(CA)n" FT repeat_region 14981598..14981674 FT /rpt_family="(CA)n" FT repeat_region 14981860..14982468 FT /rpt_family="L1PA13" FT repeat_region 14982656..14983003 FT /rpt_family="L1MA7" FT repeat_region complement(14983007..14983275) FT /rpt_family="L1PA7" FT repeat_region 14983274..14983512 FT /rpt_family="L1PA7" FT repeat_region 14983593..14983623 FT /rpt_family="AT_rich" FT repeat_region complement(14984433..14984466) FT /rpt_family="AT_rich" FT repeat_region complement(14984913..14984973) FT /rpt_family="L1PB1" FT repeat_region complement(14984975..14985271) FT /rpt_family="AluY" FT repeat_region complement(14985274..14985657) FT /rpt_family="L1PB3" FT repeat_region 14986365..14986647 FT /rpt_family="AluSg" FT repeat_region 14986648..14986676 FT /rpt_family="(CAAAA)n" FT repeat_region 14986703..14986905 FT /rpt_family="MER20" FT repeat_region complement(14986973..14987088) FT /rpt_family="MER5A" FT repeat_region complement(14987313..14987625) FT /rpt_family="L1PA8" FT repeat_region 14987622..14987901 FT /rpt_family="L1" FT repeat_region complement(14988443..14988469) FT /rpt_family="AT_rich" FT repeat_region 14988738..14988789 FT /rpt_family="MLT1A2" FT repeat_region complement(14989499..14989787) FT /rpt_family="AluSx" FT repeat_region complement(14989813..14989989) FT /rpt_family="L1MA2" FT repeat_region complement(14990078..14990369) FT /rpt_family="AluSp" FT repeat_region 14990485..14990745 FT /rpt_family="AluSx" FT repeat_region 14990862..14990890 FT /rpt_family="AT_rich" FT repeat_region 14990994..14991043 FT /rpt_family="POLY_A" FT CDS complement(14991238..>14991685) FT /codon_start=2 FT /product="BC85395_4" FT /note="Hypothetical human OLF4-like protein, partial CDS" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC25628.1" FT /translation="MVLWLSFCTDLEIPHFFCELNQVIHLACSDTFLNDMGMYFAAGLL FT AGGPLVGILCSYSKIVSSIRAISSAQGKYKAFSTCASHLSVVSLFCCTGLGVYLTSAAT FT HNSHTSATASVMYTVATPMLNPFIYSLRNKDIKRALKMSFRGKQ" FT misc_feature complement(14991237..14992166) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 82.000" FT CDS complement(14991238..14992167) FT /codon_start=1 FT /product="OLF4" FT /note="olfactory receptor" FT /protein_id="AAB82060.1" FT /translation="MEPENDTGISEFVLLGLSEEPELQPFLFGLFLSMYLVTVLGNLLI FT ILATISDSHLHTPMYFFLSNLSFADICFISTTIPKMLINIQTQSRVITYAGCITQMCFF FT VLFGGLDSLLLAVMAYDRFVAICHPLHYTVIMNPRLCGLLVLASWMIAALNSLSQSLMV FT LWLSFCTDLEIPHFFCELNQVIHLACSDTFLNDMGMYFAAGLLAGGPLVGILCSYSKIV FT SSIRAISSAQGKYKAFSTCASHLSVVSLFCCTGLGVYLTSAATHNSHTSATASVMYTVA FT TPMLNPFIYSLRNKDIKRALKMSFRGKQ" FT exon complement(14991238..14992167) FT /standard_name="OLF4 family" FT /function="olfactory receptor" FT /note="translation product 75% identical to CfOLF4 [Canis FT familiaris](U53682)" FT repeat_region complement(14992252..14992309) FT /rpt_family="Alu" FT repeat_region 14993981..14994270 FT /rpt_family="Alu" FT misc_feature complement(14994291..14994407) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 85.000" FT repeat_region 14995262..14996659 FT /rpt_family="L1" FT misc_feature complement(14995582..14995759) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 51.000" FT misc_feature complement(14996752..14996832) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 99.000" FT repeat_region 14997481..14997655 FT /rpt_family="Alu" FT misc_feature complement(14997779..14997907) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 81.000" FT misc_feature complement(14998365..14998526) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 52.000" FT repeat_region 14998583..14998944 FT /rpt_family="L1" FT repeat_region complement(14999192..15000134) FT /rpt_family="LTR13" FT exon complement(15002693..15003616) FT /pseudo FT /standard_name="OLF4p" FT /function="olfactory receptor" FT /note="69% residue identity to CfOLF4 [Canis familiaris] FT (U53682); non-functional translation product (pseudogene)." FT misc_feature complement(15002959..15003615) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 78.000" FT repeat_region 15003738..15003990 FT /rpt_family="Alu" FT repeat_region 15004852..15004901 FT /rpt_family="Alu" FT misc_feature complement(15006520..15006824) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: marginal, score: 48.000" FT repeat_region complement(15007176..15007491) FT /rpt_family="L1" FT repeat_region 15007499..15007765 FT /rpt_family="L1" FT misc_feature 15008851..15013790 FT /note="2207-7146 is PCR only." FT repeat_region complement(15016423..15016690) FT /rpt_family="L1MA6" FT repeat_region 15016694..15017008 FT /rpt_family="L1" FT repeat_region complement(15017048..15017279) FT /rpt_family="L1MA2" FT repeat_region 15017280..15017580 FT /rpt_family="AluSx" FT repeat_region complement(15017629..15017928) FT /rpt_family="AluJo" FT repeat_region 15017931..15018110 FT /rpt_family="L1MA8" FT repeat_region complement(15018117..15018414) FT /rpt_family="AluSx" FT repeat_region 15018425..15018841 FT /rpt_family="L1MA8" FT repeat_region complement(15018843..15019140) FT /rpt_family="AluSq" FT repeat_region 15019141..15019329 FT /rpt_family="L1MA8" FT repeat_region 15019826..15019966 FT /rpt_family="(TA)n" FT misc_feature 15020205..15020288 FT /note="predicted exon, program: 0, frame: 2, quality: FT excellent, score: 100.000" FT repeat_region complement(15020390..15020426) FT /rpt_family="L1MA8" FT repeat_region 15020427..15020620 FT /rpt_family="AluSx" FT repeat_region complement(15021321..15021621) FT /rpt_family="AluSx" FT repeat_region complement(15021785..15021970) FT /rpt_family="AluY" FT repeat_region complement(15022416..15022709) FT /rpt_family="AluSg" FT repeat_region 15022985..15023085 FT /rpt_family="MER20" FT repeat_region complement(15023548..15024091) FT /rpt_family="LTR10A" FT repeat_region complement(15024378..15024492) FT /rpt_family="(TAAAA)n" FT misc_feature 15024789..15024856 FT /note="predicted exon, program: 0, frame: 1, quality: good, FT score: 64.000" FT repeat_region 15025492..15025557 FT /rpt_family="(CATG)n" FT repeat_region 15025813..15026187 FT /rpt_family="LINE2" FT repeat_region complement(15026201..15026544) FT /rpt_family="AluJb" FT repeat_region 15026776..15027103 FT /rpt_family="L1MA8" FT misc_feature 15027228..15028192 FT /note="BLASTX similarity to 2447219 (1..306); match: 0.87, FT score: 1.2e-173; database searched: nr; (AC002988) OLF4 FT [Homo sapiens]." FT misc_feature 15027549..15027695 FT /note="predicted exon, program: 0, frame: 0, quality: FT excellent, score: 76.000" FT misc_feature 15028086..15028192 FT /note="predicted exon, program: 0, frame: 0, quality: good, FT score: 52.000" FT repeat_region complement(15028389..15028418) FT /rpt_family="(CAAAA)n" FT repeat_region complement(15028560..15028855) FT /rpt_family="AluSq" FT repeat_region 15029096..15029282 FT /rpt_family="AluSg" FT repeat_region 15029323..15029681 FT /rpt_family="THE1B" FT repeat_region complement(15029751..15029873) FT /rpt_family="AluSp" FT repeat_region complement(15030264..15030494) FT /rpt_family="L1PA8" FT repeat_region complement(15031234..15031529) FT /rpt_family="AluY" FT repeat_region complement(15031534..15031592) FT /rpt_family="LINE2" FT repeat_region 15031910..15032211 FT /rpt_family="AluJb" FT repeat_region complement(15032720..15033022) FT /rpt_family="AluSx" FT repeat_region complement(15033313..15033414) FT /rpt_family="(TAAAA)n" FT repeat_region 15033767..15034043 FT /rpt_family="AluSq" FT repeat_region complement(15034368..15034404) FT /rpt_family="POLY_A" FT repeat_region complement(15034405..15034716) FT /rpt_family="L1PB1" FT repeat_region 15034717..15035018 FT /rpt_family="AluSq" FT repeat_region complement(15035021..15035065) FT /rpt_family="L1PB1" FT repeat_region complement(15035178..15035207) FT /rpt_family="AT_rich" FT repeat_region complement(15035361..15035409) FT /rpt_family="(CA)n" FT repeat_region 15035606..15035903 FT /rpt_family="AluY" FT repeat_region 15036064..15036363 FT /rpt_family="AluSx" FT repeat_region 15036438..15036612 FT /rpt_family="LINE2" FT repeat_region complement(15036630..15037044) FT /rpt_family="L1PA13" FT repeat_region 15037063..15037288 FT /rpt_family="LINE2" FT repeat_region complement(15037323..15037625) FT /rpt_family="AluSp" FT misc_feature 15037864..15038848 FT /note="BLASTX similarity to 2447219 (1..308); match: 0.67, FT score: 5.6e-168; database searched: nr; (AC002988) OLF4 FT [Homo sapiens]" FT repeat_region complement(15037943..15037993) FT /rpt_family="U5" FT misc_feature 15038124..15038773 FT /note="BLASTN similarity to U86253 (1..650); match: 0.99, FT score: 3.3e-262; database searched: nt; Homo sapiens FT olfactory receptor (OR19-134) pseudogene, partial sequence" FT repeat_region complement(15038967..15039266) FT /rpt_family="AluY" FT repeat_region complement(15040232..15040729) FT /rpt_family="L1M3/4" FT repeat_region 15040743..15040817 FT /rpt_family="(TAAA)n" FT repeat_region complement(15040823..15041024) FT /rpt_family="MER2" FT repeat_region 15041274..15041361 FT /rpt_family="AluJ/FLAM" FT repeat_region complement(15041367..15042012) FT /rpt_family="PABL_A" FT repeat_region 15042013..15042072 FT /rpt_family="FLAM_A" FT repeat_region 15042441..15042741 FT /rpt_family="AluSx" FT misc_feature 15043054..15043275 FT /note="predicted exon, program: 0, frame: 2, quality: good, FT score: 64.000" FT repeat_region 15043505..15043550 FT /rpt_family="(TAAAA)n" FT repeat_region 15043702..15043775 FT /rpt_family="MIR" FT repeat_region 15043788..15043860 FT /rpt_family="L1MA3" FT repeat_region complement(15043897..15044191) FT /rpt_family="AluSx" FT repeat_region 15044193..15044792 FT /rpt_family="L1MA3" FT repeat_region complement(15044797..15044832) FT /rpt_family="AT_rich" FT repeat_region 15044845..15045144 FT /rpt_family="AluY" FT repeat_region complement(15045434..15046111) FT /rpt_family="L1PA15" FT repeat_region complement(15046187..15046268) FT /rpt_family="L1MC2" FT repeat_region 15046415..15046713 FT /rpt_family="AluSg" FT repeat_region complement(15047004..15047366) FT /rpt_family="L1" FT repeat_region 15047381..15047437 FT /rpt_family="AT_rich" FT repeat_region complement(15047748..15048052) FT /rpt_family="AluSc" FT repeat_region 15048629..15048930 FT /rpt_family="AluSp" FT repeat_region 15048949..15049116 FT /rpt_family="L1MA2" FT repeat_region 15049134..15049376 FT /rpt_family="L1MA2" FT repeat_region complement(15050228..15050525) FT /rpt_family="AluSg" FT repeat_region 15050926..15051108 FT /rpt_family="AluJo" FT repeat_region complement(15051289..15051352) FT /rpt_family="MER5A" FT repeat_region 15051354..15051657 FT /rpt_family="AluSx" FT repeat_region 15051678..15051971 FT /rpt_family="AluSg" FT repeat_region complement(15051973..15052101) FT /rpt_family="MER5A" FT CDS 15052301..15053260 FT /codon_start=1 FT /product="BC62940_2" FT /note="Hypothetical OLFR-like protein; 98% identical to FT (U86255) olfactory receptor [Homo sapiens] over residues FT 68..282 of the hypothetical protein" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC15755.1" FT /translation="MERGNQTEVGNFLLLGFAEDSDMQLLLHGLFLSMYLVTIIGNLLI FT ILTISSDSHLHTPMYFFLSNLSFADICFTSTTVPKMLVNIQTQSKMITFAGCLTQIFFF FT IAFGCLDNLLLTMTAYDRFVAICYPLHYTVIMNPRLCGLLVLGSWCISVMGSLLETLTI FT LRLSFCTNMEIPHFFCDPSEVLKLACSDTFINNIVMYFVTIVLGVFPLCGILFSYSQIF FT SSVLRVSARGQHKAFSTCGSHLSVVSLFYGTGLGVYLSSAVTPPSRTSLAASVMYTMVT FT PMLNPFIYSLRNKDMKGSLGRLLLRATSLKEGTIAKLS" FT repeat_region complement(15053322..15053619) FT /rpt_family="AluSg" FT repeat_region complement(15053622..15053921) FT /rpt_family="AluSx" FT repeat_region complement(15054066..15054132) FT /rpt_family="(CAAAA)n" FT repeat_region complement(15054133..15054432) FT /rpt_family="AluSx" FT repeat_region 15054853..15055017 FT /rpt_family="FRAM" FT repeat_region complement(15055081..15055222) FT /rpt_family="MIR" FT repeat_region 15055298..15055737 FT /rpt_family="MER83" FT repeat_region complement(15056004..15056098) FT /rpt_family="L1MA9" FT repeat_region complement(15056189..15056252) FT /rpt_family="L1MA4" FT repeat_region complement(15056253..15056553) FT /rpt_family="AluY" FT repeat_region complement(15056554..15056923) FT /rpt_family="L1MA4" FT repeat_region complement(15056944..15057245) FT /rpt_family="AluSq" FT repeat_region complement(15057246..15057482) FT /rpt_family="L1MA6" FT repeat_region complement(15057827..15058131) FT /rpt_family="AluSq" FT repeat_region complement(15058216..15058307) FT /rpt_family="MER7B" FT repeat_region complement(15058313..15058612) FT /rpt_family="AluSg" FT repeat_region complement(15058614..15059175) FT /rpt_family="MER7B" FT repeat_region 15059451..15059725 FT /rpt_family="AluSx" FT repeat_region complement(15059726..15059868) FT /rpt_family="(TA)n" FT repeat_region 15059871..15059923 FT /rpt_family="(TA)n" FT repeat_region complement(15059992..15060129) FT /rpt_family="MER77" FT repeat_region complement(15060130..15060157) FT /rpt_family="AT_rich" FT repeat_region complement(15060159..15060246) FT /rpt_family="AluJ/FLAM" FT repeat_region complement(15060263..15060557) FT /rpt_family="AluSc" FT repeat_region complement(15060558..15060617) FT /rpt_family="MER21A" FT misc_feature 15060846..15061149 FT /note="DDS similarity to emb|Z40963|HSC2KF052 H. sapiens FT partial cDNA sequence; clone c-2kf05; Score: 572 Identity: FT 295/304 (97%)." FT CDS complement(join(15061007..15061202,15063740..15063874, FT 15064947..15065141,15067288..15067521,15072814..15073157, FT 15075131..15075173,15079115..15079319,15082549..15082686, FT 15083518..15083722)) FT /codon_start=1 FT /gene="EAAT4" FT /product="EAT4_HUMAN" FT /note="EXCITATORY AMINO ACID TRANSPORTER 4; FT CHLORIDE-DEPENDENT GLUTAMATE/ASPARTATE TRANSPORTER" FT /protein_id="AAC15754.1" FT /translation="MSSHGNSLFLRESGQRLGRVGWLQRLQESLQQRALRTRLRLQTMT FT LEHVLRFLRRNAFILLTVSAVVIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLV FT LPLIVSSLVTGMASLDNKATGRMGMRAAVYYMVTTIIAVFIGILMVTIIHPGKGSKEGL FT HREGRIETIPTADAFMDLIRNMFPPNLVEACFKQFKTQYSTRVVTRTMVRTENGSEPGA FT SMPPPFSVENGTSFLENVTRALGTLQEMLSFEETVPVPGSANGINALGLVVFSVAFGLV FT IGGMKHKGRVLRDFFDSLNEAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLG FT MYTLTVIVGLFLHAGIVLPLIYFLVTHRNPFPFIGGMLQALITAMGTSSSSATLPITFR FT CLEEGLGVDRRITRFVLPVGATVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITA FT TAASVGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAA FT VIEHLSQRELELQEAELTLPSLGKPYKSLMAQEKGASRGRGGNESAM" FT repeat_region 15061492..15061772 FT /rpt_family="AluJo" FT repeat_region 15061776..15062083 FT /rpt_family="AluSg" FT repeat_region complement(15062328..15062629) FT /rpt_family="AluSq" FT repeat_region complement(15062632..15062919) FT /rpt_family="AluJb" FT repeat_region 15062971..15063102 FT /rpt_family="FLAM_A" FT repeat_region 15063105..15063299 FT /rpt_family="AluY" FT repeat_region 15063879..15063962 FT /rpt_family="(GA)n" FT repeat_region 15063982..15064031 FT /rpt_family="L1M3" FT repeat_region complement(15064111..15064365) FT /rpt_family="AluSg" FT repeat_region complement(15064367..15064537) FT /rpt_family="LINE2" FT repeat_region 15066089..15066109 FT /rpt_family="AT_rich" FT repeat_region 15066113..15066450 FT /rpt_family="AluSx" FT repeat_region 15066465..15066765 FT /rpt_family="AluSx" FT repeat_region 15066851..15066944 FT /rpt_family="(GAA)n" FT repeat_region complement(15068054..15068103) FT /rpt_family="LINE2" FT repeat_region 15068134..15068492 FT /rpt_family="MLT1A1" FT repeat_region complement(15068599..15068819) FT /rpt_family="LINE2" FT repeat_region 15068941..15069237 FT /rpt_family="AluSx" FT repeat_region 15069751..15070350 FT /rpt_family="LTR10C" FT repeat_region 15070902..15070992 FT /rpt_family="(GGAA)n" FT repeat_region 15071011..15071149 FT /rpt_family="(TGAA)n" FT repeat_region 15071207..15071323 FT /rpt_family="(TGAA)n" FT repeat_region 15071342..15071741 FT /rpt_family="L1MA8" FT repeat_region complement(15071743..15072018) FT /rpt_family="AluJb" FT repeat_region 15072019..15072169 FT /rpt_family="L1MA8" FT misc_feature 15072110..15072402 FT /note="DDS similarity to H23171 ym56g11.s1 Homo sapiens FT cDNA clone 52422 3'; Score: 527 Identity: 280/288 (97%)." FT repeat_region 15072188..15072327 FT /rpt_family="(TGAA)n" FT repeat_region 15072400..15072537 FT /rpt_family="(TGAA)n" FT repeat_region 15072554..15072676 FT /rpt_family="(TGAA)n" FT misc_feature complement(15073097..15073157) FT /gene="EAAT4" FT /note="DDS similarity to emb|F07883|HSC2KF051 H. sapiens FT partial cDNA sequence; clone c-2kf05 (295..354); 98% FT identity." FT repeat_region 15073324..15073366 FT /rpt_family="(TGAA)n" FT repeat_region 15073369..15073437 FT /rpt_family="L1MA6" FT repeat_region 15073438..15073730 FT /rpt_family="AluSc" FT repeat_region 15073733..15074408 FT /rpt_family="L1MA6" FT repeat_region complement(15074646..15074938) FT /rpt_family="AluJo" FT misc_feature complement(15075131..15075173) FT /gene="EAAT4" FT /note="DDS similarity to emb|F07883|HSC2KF051 H. sapiens FT partial cDNA sequence; clone c-2kf05 (252..294); 100% FT identity." FT repeat_region 15075661..15075831 FT /rpt_family="L1PB2" FT repeat_region complement(15075832..15076129) FT /rpt_family="AluY" FT repeat_region 15076133..15076379 FT /rpt_family="L1PB2" FT repeat_region 15076380..15076681 FT /rpt_family="AluSx" FT repeat_region 15076683..15077001 FT /rpt_family="L1PB2" FT repeat_region 15077022..15077305 FT /rpt_family="AluSx" FT repeat_region 15077335..15077394 FT /rpt_family="AT_rich" FT repeat_region 15077405..15077862 FT /rpt_family="L1PA8" FT repeat_region 15078159..15079076 FT /rpt_family="MER49" FT misc_feature complement(15079115..15079319) FT /gene="EAAT4" FT /note="DDS similarity to overlapping ESTs: (64810..64606) FT emb|F07883|HSC2KF051 H. sapiens partial cDNA sequence; FT clone c-2kf05 (47..251); 98% identity. (68177..68040) FT H23170 ym56g11.r1 Homo sapiens cDNA clone 52422 5' similar FT to SP:GLTP_RAT P24942 BRAIN SODIUM-DEPENDENT FT GLUTAMATE/ASPARTATE TRANSPORTER (336..552); 84% identity. FT (64810..64612) AA351028 EST58606 Infant brain Homo sapiens FT cDNA 5' end similar to aspartate/glutamate transporter FT EAAT4 (143..341); 100% identity." FT misc_feature complement(15079297..15079728) FT /gene="EAAT4" FT /note="DDS similarity to AA326054 EST29161 Cerebellum II FT Homo sapiens cDNA 5' end (1..435); 97% identity." FT repeat_region complement(15079664..15079951) FT /rpt_family="AluSx" FT repeat_region 15080307..15080500 FT /rpt_family="LTR16A" FT repeat_region complement(15080548..15080688) FT /rpt_family="MER58A" FT repeat_region 15080689..15080886 FT /rpt_family="MER28" FT repeat_region complement(15080887..15081182) FT /rpt_family="AluJo" FT repeat_region 15081183..15081239 FT /rpt_family="MER28" FT repeat_region 15081242..15081536 FT /rpt_family="AluY" FT repeat_region 15081537..15081661 FT /rpt_family="TIGGER2" FT repeat_region 15081663..15081958 FT /rpt_family="AluSc" FT repeat_region 15081960..15082027 FT /rpt_family="MER28" FT repeat_region complement(15082030..15082112) FT /rpt_family="MER58B" FT misc_feature complement(15082549..15082690) FT /gene="EAAT4" FT /note="DDS similarity to overlapping ESTs: (68084..68040) FT emb|F07883|HSC2KF051 H. sapiens partial cDNA sequence; FT clone c-2kf05 (1..46); 96% identity. (68181..68040) FT AA351028 EST58606 Infant brain Homo sapiens cDNA 5' end FT similar to aspartate/glutamate transporter EAAT4 (1..142); FT 99% identity. (68177..68040) H23170 ym56g11.r1 Homo sapiens FT cDNA clone 52422 5' similar to SP:GLTP_RAT P24942 BRAIN FT SODIUM-DEPENDENT GLUTAMATE/ASPARTATE TRANSPORTER FT (198..335); 100% identity. (68177..68040) R18167 yf97g11.r1 FT Homo sapiens cDNA clone 30636 5' similar to SP:GLTP_RAT FT P24942 BRAIN SODIUM-DEPENDENT GLUTAMATE/ASPARTATE FT TRANSPORTER (197..336); 97% identity." FT repeat_region complement(15082695..15082731) FT /rpt_family="LINE2" FT repeat_region complement(15082803..15082935) FT /rpt_family="(CA)n" FT repeat_region complement(15083184..15083305) FT /rpt_family="(CA)n" FT misc_feature complement(15083518..15083717) FT /gene="EAAT4" FT /note="DDS similarity to overlapping ESTs: (69208..69009) FT H23170 ym56g11.r1 Homo sapiens cDNA clone 52422 5' similar FT to SP:GLTP_RAT P24942 BRAIN SODIUM-DEPENDENT FT GLUTAMATE/ASPARTATE TRANSPORTER (1..197); 94% identity. FT (69208..69009) R18167 yf97g11.r1 Homo sapiens cDNA clone FT 30636 5' similar to SP:GLTP_RAT P24942 BRAIN FT SODIUM-DEPENDENT GLUTAMATE/ASPARTATE TRANSPORTER (1..196); FT 94% identity." FT repeat_region 15083849..15083946 FT /rpt_family="AluJ/FLAM" FT repeat_region 15083955..15084251 FT /rpt_family="AluJo" FT repeat_region 15084621..15084651 FT /rpt_family="LINE2" FT repeat_region 15084889..15085186 FT /rpt_family="AluSx" FT repeat_region 15085190..15085211 FT /rpt_family="AT_rich" FT repeat_region 15085469..15085585 FT /rpt_family="L1MB6" FT repeat_region 15085596..15085680 FT /rpt_family="AluJ/FLAM" FT repeat_region complement(15085681..15085810) FT /rpt_family="FRAM" FT repeat_region complement(15085815..15085851) FT /rpt_family="AT_rich" FT repeat_region 15085904..15086261 FT /rpt_family="L1MA4" FT repeat_region 15086284..15086584 FT /rpt_family="AluSx" FT repeat_region 15086590..15086731 FT /rpt_family="(GGAA)n" FT repeat_region 15086927..15087130 FT /rpt_family="L1P5" FT repeat_region 15087231..15087358 FT /rpt_family="L1MA2" FT repeat_region complement(15087364..15087494) FT /rpt_family="AluSq/x" FT repeat_region 15087850..15087870 FT /rpt_family="AT_rich" FT repeat_region complement(15088063..15088279) FT /rpt_family="MER58A" FT repeat_region 15088310..15088605 FT /rpt_family="AluJo" FT misc_feature 15089035..15089166 FT /note="predicted exon, program: 0, frame: 2, quality: good, FT score: 68.000" FT repeat_region 15089209..15089341 FT /rpt_family="(CA)n" FT repeat_region 15089480..15089604 FT /rpt_family="(CA)n" FT repeat_region 15089863..15089909 FT /rpt_family="(CA)n" FT repeat_region 15090324..15090435 FT /rpt_family="GC_rich" FT repeat_region 15090714..15090758 FT /rpt_family="GC_rich" FT repeat_region 15090933..15091013 FT /rpt_family="MIR" FT repeat_region 15091323..15091483 FT /rpt_family="AluSg/x" FT repeat_region complement(15091582..15091689) FT /rpt_family="MIR" FT repeat_region 15091761..15091822 FT /rpt_family="MER5B" FT repeat_region 15091824..15092124 FT /rpt_family="AluJo" FT repeat_region 15092129..15092239 FT /rpt_family="MER5B" FT repeat_region complement(15092391..15092464) FT /rpt_family="LINE2" FT repeat_region 15092565..15092685 FT /rpt_family="L1MD3" FT repeat_region 15092693..15092886 FT /rpt_family="FRAM" FT repeat_region 15092899..15093059 FT /rpt_family="L1MC3" FT repeat_region 15093060..15093347 FT /rpt_family="AluSx" FT repeat_region 15093388..15093522 FT /rpt_family="L1MC3" FT repeat_region 15093523..15093834 FT /rpt_family="MER64B" FT repeat_region complement(15093835..15094174) FT /rpt_family="MER82" FT repeat_region 15094214..15094518 FT /rpt_family="AluJb" FT repeat_region 15094520..15094554 FT /rpt_family="POLY_A" FT repeat_region complement(15094569..15094839) FT /rpt_family="MER82" FT repeat_region 15094840..15095165 FT /rpt_family="AluSp" FT repeat_region 15095214..15095688 FT /rpt_family="MER64" FT repeat_region complement(15095694..15095977) FT /rpt_family="AluSx" FT repeat_region 15095978..15096073 FT /rpt_family="MER64" FT repeat_region 15096081..15096494 FT /rpt_family="MSTA" FT repeat_region 15096495..15096787 FT /rpt_family="AluSx" FT repeat_region 15096809..15097046 FT /rpt_family="MER64" FT repeat_region 15097048..15097347 FT /rpt_family="AluSq" FT repeat_region 15097349..15097407 FT /rpt_family="MER64" FT repeat_region complement(15097408..15097683) FT /rpt_family="AluJo" FT repeat_region 15097684..15097957 FT /rpt_family="MER64" FT repeat_region complement(15097958..15097987) FT /rpt_family="LINE2" FT repeat_region 15097999..15098291 FT /rpt_family="AluSg" FT repeat_region 15098292..15098321 FT /rpt_family="AT_rich" FT repeat_region complement(15098374..15098536) FT /rpt_family="LINE2" FT repeat_region complement(15098669..15098813) FT /rpt_family="AluJo/FRAM" FT repeat_region 15098819..15098920 FT /rpt_family="AluSp" FT repeat_region complement(15098936..15099234) FT /rpt_family="LTR19B" FT repeat_region 15099249..15099422 FT /rpt_family="L1ME" FT repeat_region 15099421..15099544 FT /rpt_family="L1PA16" FT repeat_region 15099550..15099849 FT /rpt_family="AluJo" FT repeat_region 15099852..15100084 FT /rpt_family="L1PB3" FT repeat_region complement(15100085..15100371) FT /rpt_family="AluSp" FT repeat_region 15100385..15100481 FT /rpt_family="L1MA8" FT repeat_region 15100505..15100818 FT /rpt_family="AluSx" FT repeat_region 15100819..15101298 FT /rpt_family="L1MA8" FT repeat_region 15101300..15101601 FT /rpt_family="AluSq" FT repeat_region 15101615..15101854 FT /rpt_family="L1MA8" FT repeat_region 15101890..15102154 FT /rpt_family="L1MB5" FT repeat_region 15102160..15102453 FT /rpt_family="AluSx" FT repeat_region complement(15102648..15102935) FT /rpt_family="AluSx" FT repeat_region 15103271..15103483 FT /rpt_family="Alu" FT repeat_region 15104021..15104276 FT /rpt_family="L1MB6" FT repeat_region complement(15104408..15104661) FT /rpt_family="MER83" FT repeat_region 15105462..15105559 FT /rpt_family="MER4A2" FT repeat_region 15105657..15105854 FT /rpt_family="L1MA4" FT repeat_region 15105855..15106156 FT /rpt_family="AluSq" FT repeat_region 15106157..15106202 FT /rpt_family="(GAAA)n" FT repeat_region 15106206..15106503 FT /rpt_family="L1MA8" FT repeat_region complement(15106505..15106535) FT /rpt_family="AT_rich" FT repeat_region 15106967..15107237 FT /rpt_family="L1MB3" FT repeat_region complement(15107269..15107405) FT /rpt_family="(GAA)n" FT repeat_region 15107414..15107577 FT /rpt_family="LINE2" FT repeat_region 15107765..15108298 FT /rpt_family="MER4A2" FT repeat_region complement(15108520..15108751) FT /rpt_family="MLT1C" FT repeat_region complement(15108759..15108875) FT /rpt_family="L1MA8" FT repeat_region 15108876..15109064 FT /rpt_family="MER4B" FT repeat_region 15109071..15109372 FT /rpt_family="AluSx" FT repeat_region 15109434..15109682 FT /rpt_family="MER4D" FT repeat_region complement(15109689..15109989) FT /rpt_family="AluY" FT repeat_region 15109990..15110415 FT /rpt_family="MER4B" FT repeat_region complement(15110416..15110491) FT /rpt_family="L1MA8" FT repeat_region complement(15110548..15110656) FT /rpt_family="MER47A" FT repeat_region complement(15110666..15110865) FT /rpt_family="L1PA4" FT repeat_region complement(15110881..15111072) FT /rpt_family="MER47B" FT repeat_region complement(15111074..15111523) FT /rpt_family="L1MA8" FT repeat_region complement(15111535..15111748) FT /rpt_family="MLT1C" FT repeat_region complement(15111929..15112084) FT /rpt_family="LINE2" FT repeat_region complement(15112121..15112270) FT /rpt_family="LINE2" FT repeat_region complement(15112478..15112772) FT /rpt_family="AluJb" FT repeat_region complement(15112900..15113083) FT /rpt_family="AluJo" FT repeat_region complement(15113115..15113246) FT /rpt_family="AluJo" FT repeat_region complement(15113287..15113469) FT /rpt_family="MLT1C" FT repeat_region complement(15113698..15113789) FT /rpt_family="(CAAA)n" FT repeat_region complement(15113791..15114089) FT /rpt_family="AluSx" FT misc_feature complement(15114158..15114307) FT /note="predicted exon, program: 0, frame: 0, quality: good, FT score: 65.000" FT repeat_region 15114473..15114507 FT /rpt_family="POLY_A" FT repeat_region 15114687..15114975 FT /rpt_family="AluSx" FT repeat_region complement(15114986..15115006) FT /rpt_family="AT_rich" FT repeat_region 15115232..15115527 FT /rpt_family="AluJo" FT repeat_region 15115789..15116089 FT /rpt_family="AluJo" FT repeat_region 15116105..15116341 FT /rpt_family="AluSq" FT misc_feature 15116305..15117029 FT /note="DDS similarity to overlapping ESTs: (101796..102214) FT T91660 ye25c03.r1 Homo sapiens cDNA clone 118756 5' similar FT to contains Alu repetitive element; Score: 767 Identity: FT 410/424 (96%). (102520..102118) T93261 ye25c03.s1 Homo FT sapiens cDNA clone 118756 3'; Score: 774 Identity: 398/403 FT (98%).~(102119..102384) predicted exon, program: 0, frame: FT 0, quality: marginal, score: 48.000." FT repeat_region complement(15116939..15117142) FT /rpt_family="MIR" FT repeat_region 15117454..15117784 FT /rpt_family="AluJo" FT repeat_region complement(15117817..15117921) FT /rpt_family="LINE2" FT repeat_region 15117922..15118373 FT /rpt_family="L1MB5" FT repeat_region complement(15118409..15118479) FT /rpt_family="LINE2" FT repeat_region 15118516..15118554 FT /rpt_family="L1ME" FT repeat_region 15118555..15118852 FT /rpt_family="AluSq" FT repeat_region 15118876..15119172 FT /rpt_family="AluJo" FT repeat_region 15119184..15119513 FT /rpt_family="L1M2" FT repeat_region 15119515..15119819 FT /rpt_family="AluSq" FT repeat_region complement(15119822..15119954) FT /rpt_family="(TA)n" FT repeat_region complement(15119980..15120145) FT /rpt_family="(TA)n" FT repeat_region 15120204..15120575 FT /rpt_family="L1PB2" FT repeat_region complement(15120630..15120687) FT /rpt_family="LINE2" FT repeat_region 15120711..15121017 FT /rpt_family="AluSg" FT repeat_region 15121020..15121074 FT /rpt_family="(GAAAA)n" FT misc_feature 15121603..15122207 FT /note="predicted exon, program: 0, frame: 1, quality: FT excellent, score: 86.000" FT misc_feature complement(15122079..15122158) FT /note="BLASTN similarity to cpg83b2.rt1a (1..80); match: 1, FT score: 2.6e-26; database searched: Sanger CpG; bases 78 to FT 157 (SL to SR)." FT repeat_region 15122299..15122564 FT /rpt_family="AluSp" FT repeat_region 15122620..15122773 FT /rpt_family="FRAM" FT repeat_region 15122787..15123080 FT /rpt_family="AluJo" FT repeat_region 15123104..15123385 FT /rpt_family="AluJo" FT misc_feature 15124484..15124588 FT /note="predicted exon, program: 0, frame: 0, quality: FT excellent, score: 99.000" FT repeat_region complement(15124796..15124900) FT /rpt_family="MIR" FT repeat_region complement(15125143..15125260) FT /rpt_family="LINE2" FT repeat_region 15125464..15125555 FT /rpt_family="(GGA)n" FT repeat_region 15125726..15125998 FT /rpt_family="AluJo" FT repeat_region 15126002..15126054 FT /rpt_family="(GA)n" FT repeat_region 15126075..15126285 FT /rpt_family="LINE2" FT repeat_region 15126349..15126406 FT /rpt_family="LINE2" FT repeat_region 15126412..15126476 FT /rpt_family="L1MB4" FT repeat_region 15126576..15126679 FT /rpt_family="L1MB4" FT repeat_region complement(15127002..15127298) FT /rpt_family="AluSg" FT repeat_region 15127306..15127388 FT /rpt_family="LINE2" FT repeat_region 15127415..15127510 FT /rpt_family="L1ME3" FT repeat_region 15127512..15127683 FT /rpt_family="MER58A" FT repeat_region 15127737..15128049 FT /rpt_family="AluJo" FT repeat_region 15128053..15128200 FT /rpt_family="L1ME3" FT repeat_region 15128725..15128852 FT /rpt_family="FLAM_C" FT repeat_region 15128910..15129131 FT /rpt_family="AluSx" FT repeat_region 15129240..15129528 FT /rpt_family="AluJo" FT repeat_region complement(15129760..15130060) FT /rpt_family="AluJb" FT repeat_region 15130061..15130170 FT /rpt_family="L1MA9" FT repeat_region 15130181..15130345 FT /rpt_family="L1MA7" FT repeat_region 15130518..15130786 FT /rpt_family="AluJo" FT repeat_region 15130843..15131134 FT /rpt_family="AluJo" FT repeat_region complement(15131293..15131353) FT /rpt_family="TIGGER1" FT repeat_region complement(15131692..15131971) FT /rpt_family="AluSx" FT misc_feature 15132165..15132331 FT /note="predicted exon, program: 0, frame: 0, quality: FT excellent, score: 99.000" FT misc_feature 15132591..15132731 FT /note="predicted exon, program: 0, frame: 1, quality: good, FT score: 57.000" FT repeat_region 15132985..15133132 FT /rpt_family="MIR" FT repeat_region complement(15133141..15133440) FT /rpt_family="AluSx" FT repeat_region complement(15151968..15152203) FT /rpt_family="L1PA4" FT repeat_region complement(15152298..15152391) FT /rpt_family="MER81" FT repeat_region complement(15153735..15153768) FT /rpt_family="AT_rich" FT misc_feature complement(15153813..15153882) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 65.000" FT repeat_region complement(15154135..15154247) FT /rpt_family="MER63B" FT repeat_region complement(15154281..15154579) FT /rpt_family="AluSq" FT repeat_region complement(15154586..15154844) FT /rpt_family="L1MA5A" FT repeat_region complement(15154930..15154982) FT /rpt_family="L1PA16" FT repeat_region complement(15154984..15155351) FT /rpt_family="THE1C" FT repeat_region complement(15155353..15155648) FT /rpt_family="L1PA16" FT repeat_region complement(15155674..15155974) FT /rpt_family="AluSx" FT repeat_region complement(15155975..15156044) FT /rpt_family="L1PA16" FT repeat_region 15156045..15156080 FT /rpt_family="(CA)n" FT repeat_region complement(15156081..15156165) FT /rpt_family="L1PA16" FT repeat_region complement(15156164..15156415) FT /rpt_family="L1MA5A" FT repeat_region 15156821..15157120 FT /rpt_family="AluSg" FT repeat_region 15157483..15157776 FT /rpt_family="AluJb" FT repeat_region 15157777..15157956 FT /rpt_family="L1MB8" FT repeat_region 15158147..15158354 FT /rpt_family="L1MB8" FT repeat_region 15158357..15158656 FT /rpt_family="AluJo" FT repeat_region 15158657..15158774 FT /rpt_family="L1MB8" FT misc_feature 15158810..15158960 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 64.000" FT repeat_region complement(15159020..15159113) FT /rpt_family="MER72" FT repeat_region complement(15159531..15159818) FT /rpt_family="AluJo" FT repeat_region 15159831..15159975 FT /rpt_family="MIR" FT repeat_region complement(15160481..15160508) FT /rpt_family="(GA)n" FT repeat_region 15160509..15160561 FT /rpt_family="(CA)n" FT repeat_region complement(15160936..15161061) FT /rpt_family="MIR" FT repeat_region complement(15161106..15161133) FT /rpt_family="(CA)n" FT repeat_region 15161133..15161156 FT /rpt_family="(GA)n" FT repeat_region 15161286..15161409 FT /rpt_family="(TGGA)n" FT repeat_region 15161434..15161657 FT /rpt_family="(TGGA)n" FT repeat_region 15161658..15161780 FT /rpt_family="(TGGA)n" FT repeat_region 15161794..15161927 FT /rpt_family="(TAGA)n" FT repeat_region 15162032..15162332 FT /rpt_family="AluY" FT misc_feature 15162381..15162529 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 76.000" FT repeat_region complement(15163620..15163701) FT /rpt_family="MIR" FT repeat_region 15163712..15163900 FT /rpt_family="MER53" FT repeat_region complement(15163920..15164218) FT /rpt_family="AluJo" FT misc_feature 15164293..15164442 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 67.000" FT misc_feature 15164553..15164769 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature 15164616..15164768 FT /note="BLASTX similarity to P42575 (255..305); match: 0.47, FT score: 9.1e-11; database searched: nr; CASPASE-2 PRECURSOR FT (CASP-2) (ICH-1 PROTEASE) (ICH-1L/1S) >pir||A54821 FT apoptosis regulator ICH-1, stimulatory form L - human" FT repeat_region complement(15164807..15165045) FT /rpt_family="AluJo" FT repeat_region 15165108..15165410 FT /rpt_family="AluJo" FT repeat_region complement(15165452..15165751) FT /rpt_family="AluSx" FT repeat_region complement(15165758..15165930) FT /rpt_family="AluJb" FT misc_feature 15165969..15166085 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 94.000" FT misc_feature 15166241..15166344 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature 15166796..15166900 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 65.000" FT repeat_region complement(15167696..15167757) FT /rpt_family="MIR" FT repeat_region 15168428..15168708 FT /rpt_family="AluJo" FT repeat_region complement(15169253..15169550) FT /rpt_family="AluJo" FT repeat_region complement(15170154..15170373) FT /rpt_family="MER58A" FT repeat_region 15170411..15170589 FT /rpt_family="L1MA5A" FT repeat_region 15170590..15170888 FT /rpt_family="AluSx" FT repeat_region 15170895..15171194 FT /rpt_family="AluY" FT repeat_region 15171195..15171805 FT /rpt_family="L1MA5A" FT repeat_region 15171856..15172150 FT /rpt_family="AluJb" FT repeat_region 15172155..15172336 FT /rpt_family="L1MB8" FT repeat_region complement(15172345..15172405) FT /rpt_family="(CA)n" FT repeat_region 15172406..15172526 FT /rpt_family="L1MB8" FT repeat_region complement(15172543..15172611) FT /rpt_family="MSTA" FT repeat_region 15172617..15172893 FT /rpt_family="AluSx" FT repeat_region complement(15172894..15173208) FT /rpt_family="MSTA" FT repeat_region complement(15173302..15173395) FT /rpt_family="MER69A" FT repeat_region 15173552..15173720 FT /rpt_family="AluJo" FT repeat_region complement(15173881..15174032) FT /rpt_family="L1PA2" FT misc_feature complement(15175049..15175273) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 74.000" FT repeat_region 15175316..15175406 FT /rpt_family="L1MA3" FT repeat_region complement(15175429..15175791) FT /rpt_family="THE1B" FT repeat_region 15175792..15176025 FT /rpt_family="L1PB3" FT repeat_region complement(15176030..15176322) FT /rpt_family="AluSc" FT repeat_region 15176463..15176764 FT /rpt_family="AluJb" FT repeat_region 15176812..15177108 FT /rpt_family="L1MB3" FT repeat_region 15177109..15177398 FT /rpt_family="AluSx" FT repeat_region complement(15177406..15177494) FT /rpt_family="L1P1" FT repeat_region 15177494..15177620 FT /rpt_family="L1PA4" FT repeat_region 15177661..15177710 FT /rpt_family="L1MB4" FT repeat_region 15177722..15177808 FT /rpt_family="L1MB8" FT repeat_region 15177830..15178066 FT /rpt_family="L1MC3" FT repeat_region 15178083..15178202 FT /rpt_family="FLAM_C" FT repeat_region 15178241..15178540 FT /rpt_family="L1MD3" FT repeat_region complement(15178548..15178602) FT /rpt_family="L1M2" FT repeat_region 15178602..15178692 FT /rpt_family="L1MA7" FT repeat_region complement(15179332..15179370) FT /rpt_family="AT_rich" FT repeat_region 15179384..15179454 FT /rpt_family="L1PB2" FT repeat_region 15179485..15179743 FT /rpt_family="AluSc" FT repeat_region 15179794..15179837 FT /rpt_family="L1MB7" FT repeat_region 15179839..15180156 FT /rpt_family="AluJo" FT repeat_region 15180186..15180335 FT /rpt_family="L1MB7" FT repeat_region 15180337..15180636 FT /rpt_family="AluSg" FT repeat_region 15180637..15180799 FT /rpt_family="L1MB7" FT repeat_region complement(15180829..15180965) FT /rpt_family="AluSg/x" FT repeat_region 15180966..15181029 FT /rpt_family="L1MB7" FT repeat_region complement(15181102..15181565) FT /rpt_family="LTR7" FT repeat_region 15181598..15181895 FT /rpt_family="AluSc" FT repeat_region 15182041..15182316 FT /rpt_family="AluY" FT repeat_region complement(15182351..15182563) FT /rpt_family="LINE2" FT repeat_region complement(15182593..15182647) FT /rpt_family="L1MB4" FT repeat_region complement(15182653..15182953) FT /rpt_family="AluSq" FT repeat_region complement(15182958..15183074) FT /rpt_family="L1MB4" FT repeat_region complement(15183088..15183147) FT /rpt_family="LINE2" FT repeat_region 15183259..15183559 FT /rpt_family="AluSx" FT repeat_region complement(15183679..15183807) FT /rpt_family="MER4D" FT repeat_region 15183812..15184197 FT /rpt_family="LTR3" FT repeat_region complement(15184271..15184609) FT /rpt_family="MER4D" FT repeat_region 15184626..15184908 FT /rpt_family="AluSx" FT repeat_region 15184910..15184967 FT /rpt_family="L1MB4" FT repeat_region 15184968..15185268 FT /rpt_family="AluJb" FT repeat_region 15185282..15185588 FT /rpt_family="L1MB4" FT repeat_region 15185589..15185713 FT /rpt_family="MER5B" FT repeat_region 15185944..15186244 FT /rpt_family="AluSx" FT repeat_region 15186352..15186376 FT /rpt_family="L1PA5" FT repeat_region complement(15186377..15186401) FT /rpt_family="AT_rich" FT repeat_region 15186854..15187106 FT /rpt_family="MER7A" FT repeat_region 15187107..15187400 FT /rpt_family="AluSg" FT repeat_region 15187401..15187588 FT /rpt_family="MER7B" FT repeat_region complement(15187589..15187745) FT /rpt_family="L1MA5" FT repeat_region 15187748..15188050 FT /rpt_family="AluSx" FT repeat_region complement(15188064..15188178) FT /rpt_family="MER1A" FT repeat_region 15188320..15188522 FT /rpt_family="L1M1" FT repeat_region 15188523..15188814 FT /rpt_family="AluSx" FT repeat_region 15189309..15189579 FT /rpt_family="AluJo" FT repeat_region 15189581..15189823 FT /rpt_family="L1PA10" FT repeat_region 15189868..15190377 FT /rpt_family="L1PA8" FT repeat_region complement(15191074..15191376) FT /rpt_family="AluSx" FT repeat_region complement(15191429..15191715) FT /rpt_family="AluJb" FT repeat_region complement(15191720..15191747) FT /rpt_family="AT_rich" FT repeat_region complement(15191967..15192258) FT /rpt_family="AluJo" FT repeat_region 15192298..15192580 FT /rpt_family="AluSx" FT repeat_region complement(15192582..15192628) FT /rpt_family="(CAAT)n" FT repeat_region 15193452..15193526 FT /rpt_family="MER5A" FT repeat_region complement(15193621..15193917) FT /rpt_family="AluJo" FT repeat_region complement(15193921..15194206) FT /rpt_family="AluJo" FT repeat_region 15194212..15194271 FT /rpt_family="MER5A" FT repeat_region 15194522..15194807 FT /rpt_family="AluSg" FT repeat_region 15195089..15195387 FT /rpt_family="AluSg" FT repeat_region 15195401..15195543 FT /rpt_family="L1PA9" FT repeat_region 15195675..15195812 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(15195815..15195950) FT /rpt_family="MER47B" FT repeat_region complement(15195942..15195987) FT /rpt_family="(TA)n" FT repeat_region complement(15195988..15196282) FT /rpt_family="AluSq" FT repeat_region complement(15196335..15196750) FT /rpt_family="L1MA8" FT repeat_region 15196844..15196905 FT /rpt_family="AluS" FT repeat_region 15196844..15197144 FT /rpt_family="AluSx" FT misc_feature 15197153..15197194 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 57.000" FT repeat_region complement(15197263..15197555) FT /rpt_family="AluSx" FT CDS 15197877..15198944 FT /codon_start=1 FT /product="F20569_1" FT /note="Hypothetical olfactory receptor-like protein; FT Conceptual translation exhibits 51% identity to FT P30953|OLFI_HUMAN OLFACTORY RECEPTOR-LIKE PROTEIN HGMP07I, FT and 57% identity to gi|112090|pir||B23701 olfactory FT receptor F5 - rat" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC18915.1" FT /translation="MEPEKQTEISEFFLQGLSEKPEHQTLLFTMFLSTYLVTIIGNALI FT ILAIITDSHLHTPMYFFLFNLSLVDTLLSSTTVPKMLANIQAQSRAIPFVGCLTQMYAF FT HLFGTMDSFLLAVMAIDRFVAIVHPQRYLVLMCSPVCGLLLGASWMITNLQSLIHTCLM FT AQLTFCAGSEISHFFCDLMPLLKLSGSDTHTNELVIFAFGIVVGTSPFSCILLSYIRIF FT WTVFKIPSTRGKWKAFSTCGLHLTVVSLSYGTIFAVYLQPTSPSSSQKDKAAALMCGVF FT IPMLNPFIYSIRNKDMKAALGKLIGKVAVPCPRPEQLLDVYHVPGSLLAARDTEMHPIP FT YPGGVQSLAGNRDME" FT repeat_region complement(15198823..15198945) FT /rpt_family="LINE2" FT repeat_region 15199180..15199466 FT /rpt_family="AluJo" FT repeat_region 15199476..15199686 FT /rpt_family="(TAGA)n" FT repeat_region 15199692..15199745 FT /rpt_family="(TAGA)n" FT repeat_region 15199754..15199916 FT /rpt_family="(TGGA)n" FT repeat_region 15200309..15200351 FT /rpt_family="MLT1C" FT repeat_region 15200352..15200666 FT /rpt_family="AluJo" FT repeat_region 15200668..15200981 FT /rpt_family="MLT1C" FT repeat_region complement(15201011..15201310) FT /rpt_family="AluSx" FT repeat_region 15201311..15201391 FT /rpt_family="MLT1C" FT repeat_region complement(15201393..15201700) FT /rpt_family="AluJo" FT repeat_region complement(15202008..15202054) FT /rpt_family="MADE1" FT repeat_region 15202055..15202188 FT /rpt_family="AluSc" FT repeat_region 15202189..15202490 FT /rpt_family="AluY" FT repeat_region 15202492..15202659 FT /rpt_family="AluY" FT repeat_region complement(15202899..15202945) FT /rpt_family="POLY_A" FT repeat_region complement(15203016..15203107) FT /rpt_family="LINE2" FT repeat_region 15203261..15203523 FT /rpt_family="MER58B" FT repeat_region 15203525..15203830 FT /rpt_family="AluJo" FT repeat_region 15203871..15203908 FT /rpt_family="MER58A" FT repeat_region 15204009..15204127 FT /rpt_family="LINE2" FT repeat_region complement(15204235..15204532) FT /rpt_family="AluSx" FT repeat_region 15204699..15205010 FT /rpt_family="AluSx" FT repeat_region complement(15205017..15205049) FT /rpt_family="AT_rich" FT repeat_region complement(15205050..15205351) FT /rpt_family="AluSx" FT repeat_region complement(15205722..15206024) FT /rpt_family="AluJo" FT repeat_region 15206052..15206352 FT /rpt_family="AluSx" FT repeat_region complement(15206414..15206529) FT /rpt_family="MIR" FT repeat_region complement(15206564..15206587) FT /rpt_family="MIR" FT repeat_region 15206829..15206946 FT /rpt_family="MER77" FT repeat_region 15207071..15207294 FT /rpt_family="AluJo" FT repeat_region complement(15207308..15207467) FT /rpt_family="FRAM" FT repeat_region 15207483..15207677 FT /rpt_family="MER77" FT repeat_region complement(15207693..15207963) FT /rpt_family="AluSg1" FT repeat_region complement(15208018..15208093) FT /rpt_family="MER44C" FT repeat_region 15208096..15208396 FT /rpt_family="AluY" FT repeat_region complement(15208431..15208635) FT /rpt_family="L1MA3" FT repeat_region complement(15208644..15208943) FT /rpt_family="AluSx" FT repeat_region complement(15208944..15209111) FT /rpt_family="MER44C" FT repeat_region complement(15209109..15209206) FT /rpt_family="MER44A" FT repeat_region complement(15209204..15209495) FT /rpt_family="MLT1B" FT repeat_region 15209718..15209945 FT /rpt_family="AluSx" FT repeat_region 15209946..15210045 FT /rpt_family="(GAAA)n" FT repeat_region 15210046..15210182 FT /rpt_family="(GAAA)n" FT repeat_region 15210151..15210288 FT /rpt_family="(GGAA)n" FT repeat_region 15210307..15210364 FT /rpt_family="AluJ/FLAM" FT repeat_region complement(15210367..15210464) FT /rpt_family="MLT1B" FT repeat_region 15210465..15210684 FT /rpt_family="MER30" FT repeat_region 15210727..15210932 FT /rpt_family="MER77" FT repeat_region 15211170..15211437 FT /rpt_family="AluSq" FT repeat_region complement(15211452..15211597) FT /rpt_family="FRAM" FT repeat_region 15212735..15213030 FT /rpt_family="AluJo" FT repeat_region 15213031..15213325 FT /rpt_family="AluJb" FT repeat_region 15213326..15213368 FT /rpt_family="AT_rich" FT repeat_region complement(15213369..15213647) FT /rpt_family="AluSg" FT repeat_region 15213682..15213981 FT /rpt_family="AluSg" FT repeat_region complement(15214230..15214253) FT /rpt_family="AT_rich" FT repeat_region 15214641..15214940 FT /rpt_family="AluSx" FT repeat_region complement(15215158..15215673) FT /rpt_family="LINE2" FT repeat_region 15215792..15215952 FT /rpt_family="MLT1G" FT repeat_region complement(15216114..15216238) FT /rpt_family="MER4B" FT repeat_region 15216247..15216311 FT /rpt_family="AluJb" FT repeat_region complement(15216331..15216632) FT /rpt_family="AluSp" FT repeat_region 15216633..15216825 FT /rpt_family="AluJb" FT repeat_region complement(15216828..15217186) FT /rpt_family="MER4A" FT repeat_region complement(15217187..15217497) FT /rpt_family="AluSx" FT repeat_region complement(15217504..15217630) FT /rpt_family="MER4A" FT repeat_region 15218132..15218201 FT /rpt_family="(CGGG)n" FT repeat_region 15218203..15218241 FT /rpt_family="GC_rich" FT CDS join(15218245..15218332,15219867..15220240, FT 15220576..15220711,15221332..15221546,15222124..15222250, FT 15222380..15222603,15223157..15223432,15224371..15224469) FT /codon_start=1 FT /product="F02569_2" FT /note="Hypothetical 55.5 kDa proline- and leucine-rich FT protein; Conceptual translation constructed solely from FT Xgrail predictions. Hypothetical protein has domains FT similar to those found in n-chimaerin nc FT triphosphatase-activating alpha-chimerin and beta-chimaerin FT proteins (BCM BEAUTY/CRSeqAnnot Cluster: 2204.8)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC18917.1" FT /translation="MAEPLLRKTFSRLRGREKLPRKKSDAKERGHPAQRPEPSPPEPEP FT QAPEGSQAGAEGPSSPEASRSPARGAYLQSLEPSSRRWVLGGAKPAEDTSLGPGVPGTG FT EPAGEIWYNPIPEEDPRPPAPEPPGPQPGSAESEGLAPQGKNKLPIPFPKAPLHKDEEA FT AGTAAPPEPARPPGWQGAREGCPCGLRHQPLPPGQQRCQAQQLAVRLEPQGLLYAKLTL FT SEQQEAPATAEPRVFGLPLPLLVERERPPGQVPLIIQKCVGQIERRGLRVVGLYRLCGS FT AAVKKELRDAFERDSAAVCLSEDLYPDINVITAVPSLALEASGALTRGDPVFTGILKDY FT LRELPTPLITQPLYKVVLEAMARDPPNRVPPTTEGTRGLLSCLPDVERATLTLLLDHLR FT LVSSFHAYNRMTPQNLAVCFGPVLLPARQAPTRPRARSSGPGLASAVDFKHHIEVLHYL FT LQSWPGEFMPRACTTNLSQAATIPACPDNLQMSRLTCDPNDSHLCTCRWQTPKW" FT misc_feature 15218245..15218332 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 73.000" FT repeat_region complement(15218844..15218908) FT /rpt_family="MIR" FT repeat_region complement(15219464..15219525) FT /rpt_family="MIR" FT misc_feature 15219867..15220240 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 59.000" FT misc_feature 15220576..15220711 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 72.000" FT repeat_region complement(15220714..15220767) FT /rpt_family="GC_rich" FT misc_feature 15220945..15221159 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 62.000" FT misc_feature 15221332..15221546 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature 15222124..15222250 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature 15222380..15222603 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 95.000" FT repeat_region complement(15222705..15222816) FT /rpt_family="MIR" FT repeat_region 15222857..15222926 FT /rpt_family="MIR" FT misc_feature 15223157..15223432 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 85.000" FT repeat_region complement(15223562..15223689) FT /rpt_family="AluJo" FT repeat_region complement(15223714..15224005) FT /rpt_family="AluSx" FT repeat_region complement(15224009..15224139) FT /rpt_family="AluSq/x" FT misc_feature 15224371..15224764 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 95.000" FT misc_feature 15224922..15226241 FT /note="DDS similarity to overlapping ESTs:~(34398..33954) FT AA919134 ol71e08.s1 NCI_CGAP_Kid3 Homo sapiens cDNA clone FT IMAGE:1535078 3' similar to TR:Q99651 Q99651 ACETOLACTATE FT SYNTHASE HOMOLOG; (445..1); 99% identity.~~(34398..33956) FT AA535315 nf90e10.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:927210; (443..1); 100% identity.~~(34398..33978) FT AA733053 zg79b09.s1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 399545 3' similar to TR:Q99651 Q99651 FT ACETOLACTATE SYNTHASE HOMOLOG; (421..1); 99% FT identity.~~(34398..34247) AA365810 EST76656 Pineal gland II FT Homo sapiens cDNA 5' end; (179..334); 95% FT identity.~~(33079..33575) R77097 yi64h07.r1 Homo sapiens FT cDNA clone 144061 5' similar to contains MER22 repetitive FT element; Score: 767 Identity: 464/514 FT (90%).~~(33079..33576) R77863 yi77e06.r1 Homo sapiens cDNA FT clone 145282 5'. Score: 864 Identity: 476/500 FT (95%).~~(33168..33573) AA031742 zk14d02.r1 Soares pregnant FT uterus NbHPU Homo sapiens cDNA clone 470499 5'. Score: 730 FT Identity: 395/408 (96%).~~(33210..33578) W42611 zc23e01.r1 FT Soares senescent fibroblasts NbHSF Homo sapiens cDNA clone FT 323160 5'.~Score: 677 Identity: 358/368 FT (97%).~~(33451..33880) AA433877 zw31h04.r1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 770935 5'; Score: 685 FT Identity: 391/431 (90%).~~(33994..33463) T51251 yb03f08.s1 FT Homo sapiens cDNA clone 70119 3'. Score: 868 Identity: FT 469/484 (96%).~~And many others..." FT mRNA complement(15225798..>15230892) FT /product="Human acetolactate synthase homolog mRNA" FT CDS complement(join(15226063..15226241,15226377..15226482, FT 15226661..15226732,15226812..15226882,15226963..15227132, FT 15227219..15227333,15228692..15228826,15229977..15230113, FT 15230229..15230326,15230793..>15230892)) FT /codon_start=2 FT /product="Acetolactate synthase" FT /note="Human homolog of bacterial acetolactate synthase" FT /protein_id="AAC18916.1" FT /translation="YLENYLANLFAGAWEPQPEGPLPLDIPQASPQQVQRCVEILSRAK FT RPLMVLGSQALLTPTSADKLRAAVETLGVPCFLGGMARGLLGRNHPLHIRENRSAALKK FT ADVIVLAGTVCDFRLSYGRVLSHSSKIIIVNRNREEMLLNSDIFWKPQEAVQGDVGSFV FT LKLVEGLQGQTWAPDWVEELREADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDN FT SILVVDGGDFVGTAAHLVQPRGPLRWLDPGAFGTLGVGAGFALGAKLCRPDAEVWCLFG FT DGAFGYSLIEFDTFVRHKIPVMALVGNDAGWTQISREQVPSLGSNVACGLAYTDYHKAA FT MGLGARGLLLSRENEDQVVKVLHDAQQQCRDGHPVVVNILIGRTDFRDGSIAV" FT misc_feature complement(15226069..15226241) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 98.000" FT misc_feature complement(15226377..15226482) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 89.000~~DDS similarity FT to overlapping ESTs:~(34585..34534) AA919134 ol71e08.s1 FT NCI_CGAP_Kid3 Homo sapiens cDNA clone IMAGE:1535078 3' FT similar to TR:Q99651 Q99651 ACETOLACTATE SYNTHASE HOMOLOG; FT (497..446); 94% identity.~~(34610..34534) AA535315 FT nf90e10.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:927210; (520..444); 88% identity.~~(34627..34534) FT AA778935 zj38h03.s1 Soares fetal liver spleen 1NFLS S1 Homo FT sapiens cDNA clone 452597 3' similar to TR:Q99651 Q99651 FT ACETOLACTATE SYNTHASE HOMOLOG; (532..440); 95% FT identity.~~(34639..34534) AA733053 zg79b09.s1 Soares fetal FT heart NbHH19W Homo sapiens cDNA clone 399545 3' similar to FT TR:Q99651 Q99651 ACETOLACTATE SYNTHASE HOMOLOG; (527..422); FT 92.4% identity.~~(34639..34534) AA365810 EST76656 Pineal FT gland II Homo sapiens cDNA 5' end; (73..178); 99% FT identity." FT misc_feature complement(15226661..15226732) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA733053 zg79b09.s1 Soares FT fetal heart NbHH19W Homo sapiens cDNA clone 399545 3' FT similar to TR:Q99651 Q99651 ACETOLACTATE SYNTHASE HOMOLOG; FT (599..528); 93% identity.~~AA365810 EST76656 Pineal gland FT II Homo sapiens cDNA 5' end; (1..72); 99% identity." FT misc_feature complement(15226963..15227132) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 94.000" FT misc_feature complement(15227219..15227333) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~T32910 EST55698 Homo FT sapiens cDNA 5' end; (209..324); 98% identity." FT misc_feature complement(15227331..15227638) FT /note="DDS similarity to AA283611 zt16h12.r1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:713351 5'; Score: 607 FT Identity: 307/307 (100%)." FT repeat_region complement(15227723..15227792) FT /rpt_family="MIR" FT repeat_region 15228202..15228509 FT /rpt_family="AluJo" FT misc_feature complement(15228692..15228826) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(36983.. 36849) T32910 FT EST55698 Homo sapiens cDNA 5' end; (74..208); 99% FT identity.~~(36893..36849) T07403 EST05292 Homo sapiens cDNA FT clone HFBEI59; (148..14); 99% identity.~~(36983..36893) FT AA351950 EST59875 Infant brain Homo sapiens cDNA 5' end; FT (383..475); 98% identity." FT repeat_region 15229764..15229818 FT /rpt_family="MLT1G" FT misc_feature complement(15229977..15230113) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(38270..38134) AA351950 FT EST59875 Infant brain Homo sapiens cDNA; (245..382); 98% FT identity.~~(38270..38154) R14923 yf94d08.r1 Homo sapiens FT cDNA clone 30326 5'; (244..361); 94% FT identity.~~(38270..38176) W19709 zb36c07.r1 Soares FT parathyroid tumor NbHPA Homo sapiens cDNA clone 305676 5'; FT (88..15); 97% identity.~~(38257..38134) T07403 EST05292 FT Homo sapiens cDNA clone HFBEI59; (272..149); 100% FT identity.~~(38206..38134) T32910 EST55698 Homo sapiens cDNA FT 5' end; (1..73); 99% identity." FT misc_feature complement(15230229..15230326) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 76.000~~DDS similarity FT to ~AA351950 EST59875 Infant brain Homo sapiens cDNA FT (147..244); 100% identity.~~R14923 yf94d08.r1 Homo sapiens FT cDNA clone 30326 5'; (146..243); 98% identity.~~W19709 FT zb36c07.r1 Soares parathyroid tumor NbHPA Homo sapiens cDNA FT clone 305676 5'; (186..89); 95% identity." FT repeat_region complement(15230360..15230661) FT /rpt_family="AluSx" FT misc_feature complement(15230793..15230892) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 94.000~~DDS similarity FT to:~(39049..38590) AA351950 EST59875 Infant brain Homo FT sapiens cDNA; (47..146); 99% identity.~~(39049..38950) FT R14923 yf94d08.r1 Homo sapiens cDNA clone 30326 5'; FT (46..145); 100% identity.~~(39049..38950) W19709 zb36c07.r1 FT Soares parathyroid tumor NbHPA Homo sapiens cDNA clone FT 305676 5'; (287..187); 92% identity." FT repeat_region 15231177..15231261 FT /rpt_family="MIR" FT repeat_region 15231636..15231697 FT /rpt_family="AluJo/FRAM" FT CDS complement(join(15226063..15226241,15226377..15226482, FT 15226661..15226732,15226812..15226882,15226963..15227132, FT 15227219..15227333,15228692..15228826,15229977..15230113, FT 15230229..15230326,15230793..15230892,15233504..15233615, FT 15233703..15233841,15233927..15234054,15234186..15234387, FT 15235736..15235870)) FT /codon_start=1 FT /product="acetolactate synthase" FT /note="human homolog of acetolactate synthase; DPS FT similarity to Accession: gi|1730288 (U61263) acetolactate FT synthase homolog [Homo sapiens]~Score: 2820 Identity: FT 622/632 (98%) Strand: minus.~" FT /protein_id="AAB94632.1" FT /translation="METPAAAAPAGSLFPSFLLLACGTLVAALLGAAHRLGLFYQLLHK FT VDKASVRHGGENVAAVLRAHGVRFIFTLVGGHISPLLVACEKLGIRVVDTRHEVTAVFA FT ADAMARLSGTVGVAAVTAGPGLTNTVTAVKNAQMAQSPILLLGGAASTLLQNRGALQAV FT DQLSLFRPLCKFCVSVRRVRDIVPTLRAAMAAAQSGTPGPVFVELPVDVLYPYFMVQKE FT MVPAKPPKGLVGRVVSWYLENYLANLFAGAWEPQPEGPLPLDIPQASPQQVQRCVEILS FT RAKRPLMVLGSQALLTPTSADKLRAAVETLGVPCFLGGMARGLLGRNHPLHIRENRSAA FT LKKADVIVLAGTVCDFRLSYGRVLSHSSKIIIVNRNREEMLLNSDIFWKPQEAVQGDVG FT SFVLKLVEGLQGQTWAPDWVEELREADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETL FT PDNSILVVDGGDFVGTAAHLVQPRGPLRWLDPGAFGTLGVGAGFALGAKLCRPDAEVWC FT LFGDGAFGYSLIEFDTFVRHKIPVMALVGNDAGWTQISREQVPSLGSNVACGLAYTDYH FT KAAMGLGARGLLLSRENEDQVVKVLHDAQQQCRDGHPVVVNILIGRTDFRDGSIAV" FT repeat_region 15231636..15231751 FT /rpt_family="Alu" FT repeat_region 15231886..15232077 FT /rpt_family="Alu" FT repeat_region 15232356..15232638 FT /rpt_family="Alu" FT repeat_region complement(15232711..15233015) FT /rpt_family="Alu" FT misc_feature 15232889..15233182 FT /note="DDS similarity to H99617 yx30h11.s1 Homo sapiens FT cDNA clone 263301 3' similar to contains Alu repetitive FT element;contains element MER22 repetitive element ;.~Score: FT 512 Identity: 284/300 (94%)." FT repeat_region 15233018..15233088 FT /rpt_family="MIR" FT misc_feature complement(15233504..15233615) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~Other FT overlappimg matches:~(10786..10671) W19709 zb36c07.r1 FT Soares parathyroid tumor NbHPA Homo sapiens cDNA clone FT 305676 5' (404..288);96% identity.~~(10716..10671) AA351950 FT EST59875 Infant brain Homo sapiens cDNA 5' end (2..46); FT 100% identity." FT misc_feature complement(15233703..15233841) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 59.000~~Other overlapping FT matches:~(10979..10871) W19709 zb36c07.r1 Soares FT parathyroid tumor NbHPA Homo sapiens cDNA clone 305676 5' FT (511..403); 83% identity." FT misc_feature complement(15233927..15234054) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 56.000~~Other overlapping FT matches:~(11221..11177) N89966 zb36c07.s1 Soares FT parathyroid tumor NbHPA Homo sapiens cDNA clone 305676 3' FT (299..344); 93% identity." FT misc_feature complement(15234186..15234387) FT /note="DDS similarity to N89966 zb36c07.s1 Soares FT parathyroid tumor NbHPA Homo sapiens cDNA clone 305676 3' FT (96..298); 99% identity.~~predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 100.000~~Other overlaping matches:~(11554..11432) N91760 FT zb47b10.s1 Soares fetal lung NbHL19W Homo sapiens cDNA FT clone 306715 3' (96..220); 98% identity." FT misc_feature complement(15235128..15235736) FT /note="DDS similarity to N89966 zb36c07.s1 Soares FT parathyroid tumor NbHPA Homo sapiens cDNA clone 305676 3' FT (1..95); 95% identity.~~Other overlapping FT matches:~(12995..12903) N91760 zb47b10.s1 Soares fetal lung FT NbHL19W Homo sapiens cDNA clone 306715 3' (1..95); 95% FT identity." FT misc_feature complement(15235715..15235880) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(15236559..15236597) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 52.000" FT repeat_region 15237052..15237307 FT /rpt_family="MER42" FT repeat_region 15237674..15238078 FT /rpt_family="Alu" FT repeat_region complement(15238362..15238410) FT /rpt_family="MLT1" FT repeat_region complement(15238604..15238906) FT /rpt_family="Alu" FT repeat_region 15239452..15239909 FT /rpt_family="Alu" FT repeat_region 15240024..15240316 FT /rpt_family="Alu" FT misc_feature 15240742..15240911 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 50.000" FT repeat_region 15241511..15242048 FT /rpt_family="Alu" FT repeat_region 15242471..15242766 FT /rpt_family="Alu" FT repeat_region complement(15243377..15243663) FT /rpt_family="Alu" FT repeat_region 15243767..15244046 FT /rpt_family="Alu" FT repeat_region 15244654..15244953 FT /rpt_family="Alu" FT repeat_region 15245245..15245541 FT /rpt_family="Alu" FT repeat_region 15245826..15246431 FT /rpt_family="Alu" FT repeat_region complement(15246666..15246910) FT /rpt_family="Alu" FT repeat_region complement(15248064..15248255) FT /rpt_family="THE1" FT repeat_region 15248251..15248437 FT /rpt_family="Alu" FT misc_feature complement(15248505..15248543) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 62.000" FT repeat_region complement(15248801..15248889) FT /rpt_family="MLT1" FT repeat_region 15249151..15249428 FT /rpt_family="Alu" FT repeat_region complement(15250256..15250350) FT /rpt_family="L1" FT repeat_region 15250639..15250916 FT /rpt_family="Alu" FT repeat_region 15251262..15251555 FT /rpt_family="Alu" FT repeat_region complement(15251614..15251896) FT /rpt_family="Alu" FT misc_feature complement(15251916..15252506) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 83.000" FT misc_feature complement(15251943..15252855) FT /note="DPS similarity to gi|1171893|sp|P23275 |OLF3_MOUSE FT OLFACTORY RECEPTOR OR3; gi|423527|pir|A46247 olfactory FT receptor OR3 - mouse gi|200154 (M84005) olfactory receptor FT [Mus musculus]; Score: 575 Identity: 120/312 FT (38%).~~Accession: gi|1016362 (L34074) OL1 receptor [Rattus FT norvegicus]Score: 642 Identity: 129/313 (41%).~~Accession: FT gi|400672|sp|P30954|OLFJ_HUMAN OLFACTORY RECEPTOR-LIKE FT PROTEIN HGMP07J gi|107232|pir||S20573 olfactory receptor - FT human gi|32093 (X64995) HGMP07J gene product [Homo sapiens] FT gi|228481|prf||1804351C olfactory receptor HGMP07J [Homo FT sapiens]; Score: 678 Identity: 142/320 (44%)." FT misc_feature complement(15252632..15252855) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 94.000" FT repeat_region 15252969..15253221 FT /rpt_family="Alu" FT repeat_region 15253868..15254152 FT /rpt_family="Alu" FT repeat_region 15254710..15255114 FT /rpt_family="THE1" FT repeat_region 15256451..15256738 FT /rpt_family="Alu" FT repeat_region 15256776..15256953 FT /rpt_family="L1" FT repeat_region 15257089..15257355 FT /rpt_family="Alu" FT repeat_region 15257743..15257984 FT /rpt_family="Alu" FT repeat_region complement(15259466..15259591) FT /rpt_family="Alu" FT repeat_region complement(15260112..15260404) FT /rpt_family="Alu" FT misc_feature 15260568..15260754 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 55.000" FT repeat_region 15261648..15262119 FT /rpt_family="Alu" FT repeat_region 15262207..15262490 FT /rpt_family="Alu" FT repeat_region complement(15265879..15266159) FT /rpt_family="Alu" FT repeat_region 15266431..15267144 FT /rpt_family="Alu" FT misc_feature 15267337..15267447 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 51.000" FT repeat_region 15268867..15269041 FT /rpt_family="MER20" FT repeat_region 15269099..15269399 FT /rpt_family="AluSq" FT misc_feature 15270445..15271527 FT /note="DDS similarity to overlapping ESTs: ~(2791..3277) FT AA348213 EST54656 Hippocampus I Homo sapiens cDNA 3' end; FT Score: 908 Identity: 473/485 (97%).~(2791..3279) AA557201 FT nl74h09.s1 NCI_CGAP_Br2 Homo sapiens cDNA clone FT IMAGE:1056449; Score: 966 Identity: 486/489 FT (99%).~(2791..3285) AA495983 zw06d07.s1 Soares NhHMPu S1 FT Homo sapiens cDNA clone 768493 3'; Score: 986 Identity: FT 494/495 (99%).~(2795..3310) AA007598 zh99b03.s1 Soares FT fetal liver spleen 1NFLS S1 Homo sapiens cDNA clone 429389 FT 3'; Score: 831 Identity: 479/521 (91%).~(3280..2819) FT W92249 ze14c12.r1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 358966 5'; Score: 780 Identity: 445/472 FT (94%).~(2880..3286) AA481651 zv06b10.r1 Soares NhHMPu S1 FT Homo sapiens cDNA clone 752827 5'; Score: 802 Identity: FT 404/407 (99%).~(3312..2802) H04572 yj16c08.r1 Homo sapiens FT cDNA clone 148910 5'; Score: 729 Identity: 465/488 FT (95%).~(3409..2991) AA484871 ne81d05.s1 NCI_CGAP_Ew1 Homo FT sapiens cDNA clone IMAGE: 910665; Score: 797 Identity: FT 413/418 (98%).~(3523..3037) AA195359 zr33h05.r1 Soares FT NhHMPu S1 Homo sapiens cDNA clone 665241 5'; Score: 928 FT Identity: 478/485 (98%).~(3463..3075) AA481418 zv06b10.s1 FT Soares NhHMPu S1 Homo sapiens cDNA clone 752827 3'; Score: FT 766 Identity: 386/389 (99%).~(3621..3269) T79722 FT yd71g05.r1 Homo sapiens cDNA clone 113720 5'; Score: 634 FT Identity: 349/361 (96%).~(3707..3365) AA348214 EST54657 FT Hippocampus I Homo sapiens cDNA 5' end; Score: 674 FT Identity: 340/343 (99%)~(3873..3616) AA301460 EST14422 FT Testis tumor Homo sapiens cDNA 5' end; Score: 504 Identity: FT 255/258 (98%).~Additional EST matches:~T47069 and T47068." FT repeat_region 15271050..15271082 FT /rpt_family="AT_rich" FT repeat_region 15271111..15271149 FT /rpt_family="POLY_A" FT repeat_region 15271339..15271430 FT /rpt_family="(GAAA)n" FT CDS complement(join(15271473..15272525,15273276..15273373, FT 15276179..15276326,15276598..15276902,15278060..15278222, FT 15280897..15280981,15281142..15281364,15281482..15281636, FT 15284879..15285211,15288336..15288901,15289634..15289752, FT 15289836..15290093,15290175..15290307,15290883..15291067, FT 15291492..15291639,15291772..15291973,15292387..15292612, FT 15295106..15295261,15295717..15295830,15296068..15296219, FT 15296298..15296490,15297689..15297799,15297916..15298149, FT 15298692..15298805,15299046..15299159,15299800..15299985, FT 15300084..15300239,15302235..15302468,15302556..15302678, FT 15302771..15303109,15303188..15303330,15308311..>15308389)) FT /codon_start=3 FT /gene="NOTCH3" FT /product="Notch 3" FT /note="Notch protein homolog 3- Human; Residues 1..41 of FT Notch3 protein can be found in cosmid clone R33209 FT (AC004257) which overlaps to the right of cosmid R29783" FT /protein_id="AAC15789.1" FT /translation="PPCLDGSPCANGGRCTQLPSREAACLCPPGWVGERCQLEDPCHSG FT PCAGRGVCQSSVVAGTARFSCRCPRGFRGPDCSLPDPCLSSPCAHGARCSVGPDGRFLC FT SCPPGYQGRSCRSDVDECRVGEPCRHGGTCLNTPGSFRCQCPAGYTGPLCENPAVPCAP FT SPCRNGGTCRQSGDLTYDCACLPGFEGQNCEVNVDDCPGHRCLNGGTCVDGVNTYNCQC FT PPEWTGQFCTEDVDECQLQPNACHNGGTCFNTLGGHSCVCVNGWTGESCSQNIDDCATA FT VCFHGATCHDRVASFYCACPMGKTGLLCHLDDACVSNPCHEDAICDTNPVNGRAICTCP FT PGFTGGACDQDVDECSIGANPCEHLGRCVNTQGSFLCQCGRGYTGPRCETDVNECLSGP FT CRNQATCLDRIGQFTCICMAGFTGTYCEVDIDECQSSPCVNGGVCKDRVNGFSCTCPSG FT FSGSTCQLDVDECASTPCRNGAKCVDQPDGYECRCAEGFEGTLCDRNVDDCSPDPCHHG FT RCVDGIASFSCACAPGYTGTRCESQVDECRSQPCRHGGKCLDLVDKYLCRCPSGTTGVN FT CEVNIDDCASNPCTFGVCRDGINRYDCVCQPGFTGPLCNVEINECASSPCGEGGSCVDG FT ENGFRCLCPPGSLPPLCLPPSHPCAHEPCSHGICYDAPGGFRCVCEPGWSGPRCSQSLA FT RDACESQPCRAGGTCSSDGMGFHCTCPPGVQGRQCELLSPCTPNPCEHGGRCESAPGQL FT PVCSCPQGWQGPRCQQDVDECAGPAPCGPHGICTNLAGSFSCTCHGGYTGPSCDQDIND FT CDPNPCLNGGSCQDGVGSFSCSCLPGFAGPRCARDVDECLSNPCGPGTCTDHVASFTCT FT CPPGYGGFHCEQDLPDCSPSSCFNGGTCVDGVNSFSCLCRPGYTGAHCQHEADPCLSRP FT CLHGGVCSAAHPGFRCTCLESFTGPQCQTLVDWCSRQPCQNGGRCVQTGAYCLCPPGWS FT GRLCDIRSLPCREAAAQIGVRLEQLCQAGGQCVDEDSSHYCVCPEGRTGSHCEQEVDPC FT LAQPCQHGGTCRGYMGGYMCECLPGYNGDNCEDDVDECASQPCQHGGSCIDLVARYLCS FT CPPGTLGVLCEINEDDCGPGPPLDSGPRCLHNGTCVDLVGGFRCTCPPGYTGLRCEADI FT NECRSGACHAAHTRDCLQDPGGGFRCLCHAGFSGPRCQTVLSPCESQPCQHGGQCRPSP FT GPGGGLTFTCHCAQPFWGPRCERVARSCRELQCPVGVPCQQTPRGPRCACPPGLSGPSC FT RSFPGSPPGASNASCAAAPCLHGGSCRPAPLAPFFRCACAQGWTGPRCEAPAAAPEVSE FT EPRCPRAACQAKRGDQRCDRECNSPGCGWDGGDCSLSVGDPWRQCEALQCWRLFNNSRC FT DPACSSPACLYDNFDCHAGGRERTCNPVYEKYCADHFADGRCDQGCNTEECGWDGLDCA FT SEVPALLARGVLVLTVLLPPEELLRSSADFLQRLSAILRTSLRFRLDAHGQAMVFPYHR FT PSPGSEPRARRELAPEVIGSVVMLEIDNRLCLQSPENDHCFPDAQSAADYLGALSAVER FT LDFPYPLRDVRGEPLEPPEPSVPLLPLLVAGAVLLLVILVLGVMVARRKREHSTLWFPE FT GFSLHKDVASGHKGRREPVGQDALGMKNMAKGESLMGEVATDWMDTECPEAKRLKVEEP FT GMGAEEAVDCRQWTQHHLVAADIRVAPAMALTPPQGDADADGMDVNVRGPDGFTPLMLA FT SFCGGALEPMPTEEDEADDTSASIISDLICQGAQLGARTDRTGETALHLAARYARADAA FT KRLLDAGADTNAQDHSGRTPLHTAVTADAQGVFQILIRNRSTDLDARMADGSTALILAA FT RLAVEGMVEELIASHADVNAVDELGKSALHWAAAVNNVEATLALLKNGANKDMQDSKEE FT TPLFLAAREGSYEAAKLLLDHFANREITDHLDRLPRDVAQERLHQDIVRLLDQPSGPRS FT PPGPHGLGPLLCPPGAFLPGLKAAQSGSKKSRRPPGKAGLGPQGPRGRGKKLTLACPGP FT LADSSVTLSPVDSLDSPRPFGGPPASPGGFPLEGPYAAATATAVSLAQLGGPGRAGLGR FT QPPGGCVLSLGLLNPVAVPLDWARLPPPAPPGPSFLLPLAPGPQLLNPGTPVSPQERPP FT PYLAVPGHGEEYPAAGAHSSPPKARFLRVPSEHPYLTPSPESPEHWASPSPPSLSDWSE FT STPSPATATGAMATTTGALPAQPLPLSVPSSLAQAQTQLGPQPEVTPKRQVLA" FT repeat_region complement(15272196..15272245) FT /rpt_family="GC_rich" FT repeat_region 15272608..15272690 FT /rpt_family="MIR" FT repeat_region complement(15272794..15273092) FT /rpt_family="AluSx" FT repeat_region complement(15273170..15273232) FT /rpt_family="Alu" FT repeat_region complement(15273565..15273623) FT /rpt_family="(CA)n" FT repeat_region complement(15273720..15274015) FT /rpt_family="AluJb" FT repeat_region 15274051..15274354 FT /rpt_family="L1" FT repeat_region 15274360..15274661 FT /rpt_family="AluJo" FT repeat_region 15274663..15275032 FT /rpt_family="L1MB8" FT repeat_region 15275073..15275372 FT /rpt_family="AluSq" FT repeat_region complement(15275391..15275529) FT /rpt_family="MER3" FT repeat_region 15275540..15275604 FT /rpt_family="MER20" FT repeat_region complement(15275607..15275887) FT /rpt_family="AluJb" FT misc_feature complement(15276598..15276902) FT /gene="NOTCH3" FT /note="DDS similarity to N23491 yx13d12.r1 Homo sapiens FT cDNA clone 261623 5' similar to SP :NOTC_XENLA P21783 XOTCH FT (328..23); 98% identity." FT misc_feature complement(15278060..15278247) FT /gene="NOTCH3" FT /note="DDS similarity to N23491 yx13d12.r1 Homo sapiens FT cDNA clone 261623 5' similar to SP :NOTC_XENLA P21783 XOTCH FT (512..329); 92% identity." FT repeat_region complement(15278369..15278645) FT /rpt_family="AluSx" FT repeat_region complement(15278696..15278725) FT /rpt_family="POLY_A" FT repeat_region complement(15278748..15278897) FT /rpt_family="AluJo/FRAM" FT repeat_region 15278930..15279021 FT /rpt_family="MIR" FT repeat_region 15279363..15279662 FT /rpt_family="AluSx" FT repeat_region complement(15279735..15279887) FT /rpt_family="FRAM" FT repeat_region 15279889..15279981 FT /rpt_family="MLT1B" FT repeat_region complement(15279994..15280047) FT /rpt_family="(GA)n" FT repeat_region 15280053..15280220 FT /rpt_family="MLT1B" FT repeat_region complement(15280272..15280427) FT /rpt_family="AluSq" FT repeat_region complement(15281865..15282142) FT /rpt_family="AluSx" FT repeat_region complement(15282161..15282473) FT /rpt_family="AluJb" FT repeat_region complement(15282482..15282693) FT /rpt_family="AluSc" FT repeat_region complement(15282705..15283006) FT /rpt_family="AluSp" FT repeat_region complement(15283475..15283763) FT /rpt_family="AluSx" FT repeat_region complement(15283775..15283915) FT /rpt_family="(GAA)n" FT repeat_region complement(15283916..15283939) FT /rpt_family="POLY_A" FT repeat_region 15283951..15284252 FT /rpt_family="AluY" FT repeat_region complement(15284261..15284343) FT /rpt_family="FLAM_A" FT repeat_region 15284378..15284555 FT /rpt_family="AluSg/x" FT repeat_region 15284556..15284622 FT /rpt_family="(GAA)n" FT misc_feature 15284882..15284984 FT /note="DDS similarity to R48628 yj68b06.r1 Homo sapiens FT cDNA clone 153875 5' (1..103); Score: 190 Identity: 99/103 FT (96%)" FT repeat_region complement(15285383..15285684) FT /rpt_family="AluSx" FT repeat_region complement(15285695..15285859) FT /rpt_family="FRAM" FT repeat_region complement(15285874..15285993) FT /rpt_family="LINE2" FT repeat_region 15286062..15286364 FT /rpt_family="AluSq" FT repeat_region complement(15286365..15286440) FT /rpt_family="(TA)n" FT repeat_region complement(15286494..15286729) FT /rpt_family="LINE2" FT repeat_region 15286787..15286904 FT /rpt_family="(CAGA)n" FT repeat_region complement(15286975..15287272) FT /rpt_family="AluSp" FT repeat_region 15287290..15287593 FT /rpt_family="AluJb" FT repeat_region 15287603..15287902 FT /rpt_family="AluSg" FT repeat_region 15287908..15288076 FT /rpt_family="AluSg/x" FT repeat_region 15288148..15288269 FT /rpt_family="(CAGA)n" FT repeat_region 15288243..15288329 FT /rpt_family="(TGGA)n" FT repeat_region complement(15288566..15288819) FT /rpt_family="GC_rich" FT misc_feature complement(15288763..15288901) FT /gene="NOTCH3" FT /note="DDS similarity to overlapping ESTs:~(21247..21109) FT AA284113 zc40b04.T7 Soares senescent fibroblasts NbHSF Homo FT sapiens cDNA clone 324751 3' similar to TR:G483581 G483581 FT NOTCH 3 (353..488); 95% identity.~(21247..21110) W47159 FT zc40b04.s1 Soares senescent fibroblasts NbHSF Homo sapiens FT cDNA clone 324751 3' similar to PIR:S45306 S45306 notch 3 FT protein - mouse (136..1); 89% identity." FT repeat_region 15288919..15289038 FT /rpt_family="(GGAA)n" FT repeat_region complement(15289201..15289494) FT /rpt_family="AluSx" FT misc_feature complement(15289616..15289752) FT /gene="NOTCH3" FT /note="DDS similarity to overlapping ESTs: ~(22098..21962) FT W47280 zc40b04.r1 Soares senescent fibroblasts NbHSF Homo FT sapiens cDNA clone 324751 5' similar to PIR:S45306 S45306 FT notch 3 protein - mouse (237..383); 87% identity. FT ~(22098..21980) AA284113 zc40b04.T7 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 324751 3' similar FT to TR:G483581 G483581 NOTCH 3 (234..352); 100% FT identity.~(22098..21980) W47159 zc40b04.s1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 324751 3' similar FT to PIR:S45306 S45306 notch 3 protein - mouse (254..137); FT 98% identity." FT misc_feature complement(15289836..15290072) FT /gene="NOTCH3" FT /note="DDS similarity to overlapping ESTs:~(22418..22182) FT W47280 zc40b04.r1 Soares senescent fibroblasts NbHSF Homo FT sapiens cDNA clone 324751 5' similar to PIR:S45306 S45306 FT notch 3 protein - mouse (1..236); 99% identity. FT ~(22355..22182) W47159 zc40b04.s1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 324751 3' similar FT to PIR:S45306 S45306 notch 3 protein - mouse (422..255); FT 88% identity.~(22416..22182) AA284113 zc40b04.T7 Soares FT senescent fibroblasts NbHSF Homo sapiens cDNA clone 324751 FT 3' similar to TR:G483581 G483581 NOTCH 3 (1..233); 99% FT identity." FT repeat_region 15290435..15290711 FT /rpt_family="AluSx" FT misc_feature complement(15292443..15292612) FT /gene="NOTCH3" FT /note="DDS similarity to overlapping ESTs:~(24958..24789) FT emb|F13534|HSC32B031 H. sapiens partial cDNA sequence; FT clone c-32b03 (91..260); 98% identity.~(24958..24845) FT T65500 yc73f03.r1 Homo sapiens cDNA clone 21534 5' similar FT to SP:NOTC_XENLA P21783 XOTCH (79..191); 95% identity." FT repeat_region 15292912..15293034 FT /rpt_family="MER33" FT repeat_region 15293036..15293337 FT /rpt_family="AluJb" FT repeat_region 15293338..15293450 FT /rpt_family="MER33" FT repeat_region complement(15293451..15293752) FT /rpt_family="AluSp" FT repeat_region complement(15293754..15293795) FT /rpt_family="AT_rich" FT repeat_region 15293811..15294081 FT /rpt_family="AluJo" FT repeat_region 15294083..15294190 FT /rpt_family="MER33" FT repeat_region complement(15294209..15294509) FT /rpt_family="AluSp" FT repeat_region 15294580..15294868 FT /rpt_family="AluJo" FT repeat_region 15294888..15295002 FT /rpt_family="MIR" FT misc_feature complement(15295717..15295796) FT /gene="NOTCH3" FT /note="DDS similarity to overlapping ESTs:~(28412..28063) FT T65500 yc73f03.r1 Homo sapiens cDNA clone 21534 5' similar FT to SP:NOTC_XENLA P21783 XOTCH (1..78); 94% identity. FT ~(28150..28063) emb|F13534|HSC32B031 H. sapiens partial FT cDNA sequence; clone c-32b03 (1..90); 92% identity." FT repeat_region complement(15296716..15296886) FT /rpt_family="AluJ" FT repeat_region complement(15296948..15297075) FT /rpt_family="AluJ" FT repeat_region complement(15297177..15297230) FT /rpt_family="(CA)n" FT repeat_region complement(15297231..15297515) FT /rpt_family="AluSx" FT repeat_region complement(15300328..15300629) FT /rpt_family="AluSq" FT repeat_region complement(15300681..15300757) FT /rpt_family="L1MC4" FT repeat_region 15300804..15301103 FT /rpt_family="AluJo" FT repeat_region complement(15301393..15301697) FT /rpt_family="AluJo" FT repeat_region complement(15301705..15301831) FT /rpt_family="FLAM_C" FT repeat_region complement(15301840..15302143) FT /rpt_family="AluSx" FT repeat_region 15303445..15303745 FT /rpt_family="AluSx" FT repeat_region complement(15303753..15303948) FT /rpt_family="LINE2" FT repeat_region 15303978..15304051 FT /rpt_family="MLT1D" FT repeat_region complement(15304052..15304213) FT /rpt_family="AluSg/x" FT repeat_region 15304309..15304601 FT /rpt_family="AluSx" FT repeat_region 15304613..15304910 FT /rpt_family="AluSg" FT repeat_region 15304911..15305072 FT /rpt_family="AluJo/FRAM" FT repeat_region 15305096..15305335 FT /rpt_family="MLT1C" FT repeat_region complement(15305391..15305479) FT /rpt_family="LINE2" FT repeat_region 15305487..15305785 FT /rpt_family="AluSp" FT repeat_region 15305819..15305883 FT /rpt_family="(CA)n" FT repeat_region complement(15306513..15306705) FT /rpt_family="GC_rich" FT repeat_region complement(15306983..15307009) FT /rpt_family="GC_rich" FT repeat_region complement(15307565..15307631) FT /rpt_family="MIR" FT repeat_region complement(15307780..15307855) FT /rpt_family="MIR" FT repeat_region complement(15308544..15308570) FT /rpt_family="GC_rich" FT repeat_region 15309165..15309278 FT /rpt_family="(GA)n" FT repeat_region 15309280..15309572 FT /rpt_family="AluSq" FT repeat_region 15309573..15309738 FT /rpt_family="AluSc" FT repeat_region complement(15309955..15310082) FT /rpt_family="(CA)n" FT repeat_region complement(15310112..15310233) FT /rpt_family="(CA)n" FT repeat_region complement(15310302..15310449) FT /rpt_family="(CA)n" FT repeat_region complement(15310672..15310762) FT /rpt_family="GC_rich" FT repeat_region complement(15310862..15311051) FT /rpt_family="GC_rich" FT repeat_region 15311135..15311200 FT /rpt_family="GC_rich" FT CDS complement(<15311599..15311716) FT /codon_start=1 FT /gene="NOTCH3" FT /product="Notch3" FT /note="NEUROGENIC LOCUS NOTCH 3 PROTEIN" FT /protein_id="AAC04897.1" FT /translation="MGPGARGRRRRRRPMSPPPPPPPVRALPLLLLLAGPGAA" FT repeat_region 15311620..15311732 FT /rpt_family="(CGG)n" FT repeat_region complement(15311814..15311924) FT /rpt_family="(CGGG)n" FT repeat_region 15312235..15312536 FT /rpt_family="AluSx" FT repeat_region complement(15312797..15312985) FT /rpt_family="AluSx" FT repeat_region complement(15312999..15313302) FT /rpt_family="AluY" FT repeat_region complement(15313303..15313434) FT /rpt_family="AluSx" FT repeat_region complement(15313699..15313770) FT /rpt_family="LINE2" FT misc_feature complement(15313932..15313965) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 51.000" FT repeat_region complement(15314102..15314388) FT /rpt_family="AluSx" FT repeat_region complement(15314397..15314696) FT /rpt_family="AluSp" FT repeat_region complement(15314699..15315001) FT /rpt_family="AluSx" FT repeat_region 15315038..15315193 FT /rpt_family="BC200" FT repeat_region 15315211..15315486 FT /rpt_family="AluJo" FT repeat_region complement(15315490..15315781) FT /rpt_family="L1MC4" FT repeat_region 15315784..15316081 FT /rpt_family="AluJo" FT repeat_region 15316087..15316388 FT /rpt_family="AluSx" FT repeat_region complement(15316476..15316605) FT /rpt_family="AluSg/x" FT repeat_region complement(15316612..15316686) FT /rpt_family="AluSg/x" FT repeat_region complement(15316692..15317014) FT /rpt_family="L1MC4" FT repeat_region complement(15317077..15317178) FT /rpt_family="L1MC4" FT repeat_region complement(15317182..15317242) FT /rpt_family="(CAA)n" FT repeat_region complement(15317243..15317427) FT /rpt_family="AluJo" FT repeat_region complement(15317428..15317732) FT /rpt_family="L1MB6" FT repeat_region complement(15317734..15317778) FT /rpt_family="(TAA)n" FT repeat_region complement(15317779..15318093) FT /rpt_family="AluSc" FT repeat_region complement(15318094..15318169) FT /rpt_family="L1MB6" FT repeat_region complement(15318185..15318475) FT /rpt_family="AluSg1" FT repeat_region complement(15318484..15318774) FT /rpt_family="AluSg" FT repeat_region 15318847..15318977 FT /rpt_family="AluJ" FT repeat_region 15318978..15319276 FT /rpt_family="AluSg" FT repeat_region 15319280..15319333 FT /rpt_family="AluJ" FT repeat_region 15319334..15319636 FT /rpt_family="AluY" FT repeat_region 15319644..15319760 FT /rpt_family="AluJ" FT repeat_region 15319786..15320082 FT /rpt_family="AluSg" FT repeat_region 15320220..15320521 FT /rpt_family="AluSq" FT repeat_region 15320582..15320731 FT /rpt_family="FRAM" FT repeat_region 15320734..15320956 FT /rpt_family="AluJo" FT repeat_region 15320986..15321136 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(15321704..15322003) FT /rpt_family="AluSq" FT repeat_region complement(15322030..15322333) FT /rpt_family="AluJo" FT repeat_region 15322535..15322836 FT /rpt_family="AluJb" FT repeat_region 15323007..15323297 FT /rpt_family="AluSc" FT repeat_region complement(15323482..15323590) FT /rpt_family="AluSg/x" FT repeat_region 15323810..15324130 FT /rpt_family="AluSx" FT repeat_region 15324135..15324435 FT /rpt_family="AluY" FT repeat_region complement(15325169..15325299) FT /rpt_family="LINE2" FT repeat_region 15325310..15325448 FT /rpt_family="AluJo" FT repeat_region complement(15325449..15325745) FT /rpt_family="AluSg" FT repeat_region 15325760..15325930 FT /rpt_family="AluJo" FT repeat_region 15325931..15326233 FT /rpt_family="AluSx" FT repeat_region complement(15326303..15326595) FT /rpt_family="LINE2" FT repeat_region complement(15326597..15326760) FT /rpt_family="AluSg/x" FT repeat_region complement(15326761..15327055) FT /rpt_family="AluSp" FT repeat_region complement(15327065..15327362) FT /rpt_family="AluSx" FT repeat_region complement(15327363..15327551) FT /rpt_family="AluJo" FT repeat_region complement(15327558..15327850) FT /rpt_family="AluSc" FT repeat_region complement(15327889..15327973) FT /rpt_family="AluJ/FLAM" FT misc_feature 15328125..15328296 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 80.000" FT repeat_region complement(15328230..15328332) FT /rpt_family="MER1A" FT repeat_region complement(15328335..15328634) FT /rpt_family="AluSp" FT repeat_region complement(15328658..15328958) FT /rpt_family="AluSx" FT repeat_region complement(15328969..15329265) FT /rpt_family="AluSx" FT repeat_region complement(15329266..15329645) FT /rpt_family="MER1A" FT repeat_region 15329850..15329984 FT /rpt_family="AluSx" FT repeat_region 15329985..15330280 FT /rpt_family="AluSx" FT repeat_region 15330281..15330450 FT /rpt_family="AluSx" FT repeat_region 15330453..15330513 FT /rpt_family="AluS" FT repeat_region 15330519..15330809 FT /rpt_family="AluSx" FT repeat_region 15331020..15331322 FT /rpt_family="AluSq" FT repeat_region complement(15331622..15331756) FT /rpt_family="FLAM_C" FT repeat_region complement(15331936..15331964) FT /rpt_family="(CAAAA)n" FT repeat_region complement(15331969..15332270) FT /rpt_family="AluSx" FT repeat_region complement(15332275..15332577) FT /rpt_family="AluJb" FT repeat_region 15332582..15332682 FT /rpt_family="LINE2" FT repeat_region complement(15332683..15332977) FT /rpt_family="AluSg" FT repeat_region complement(15332983..15333272) FT /rpt_family="AluY" FT repeat_region complement(15334006..15334041) FT /rpt_family="tRNA-Gly-GGG" FT repeat_region 15334050..15334087 FT /rpt_family="(TGAG)n" FT repeat_region 15334334..15334369 FT /rpt_family="GC_rich" FT repeat_region 15334833..15335073 FT /rpt_family="LINE2" FT repeat_region 15335096..15335219 FT /rpt_family="AluJ" FT repeat_region 15335221..15335483 FT /rpt_family="AluSx" FT repeat_region 15335484..15335649 FT /rpt_family="AluJ" FT repeat_region 15335804..15335934 FT /rpt_family="AluSg" FT repeat_region 15335936..15336234 FT /rpt_family="AluY" FT repeat_region 15336235..15336412 FT /rpt_family="AluSg" FT repeat_region complement(15337022..15337318) FT /rpt_family="AluY" FT repeat_region 15337383..15337415 FT /rpt_family="MER33" FT repeat_region 15337418..15337720 FT /rpt_family="AluSx" FT misc_feature complement(15338260..15338340) FT /note="BLASTX similarity to PID (313..339); match: 0.33, FT score: 4.4e-11; database searched: nr; (Z71181) K07C5.5 FT [Caenorhabditis elegans]" FT misc_feature complement(15338279..15338473) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 85.000" FT misc_feature complement(15338398..15338466) FT /note="BLASTX similarity to PID (273..295); match: 0.34, FT score: 4.4e-11; database searched: nr; (Z71181) K07C5.5 FT [Caenorhabditis elegans]" FT repeat_region 15338484..15338517 FT /rpt_family="(CAGA)n" FT misc_feature complement(15338566..15338670) FT /note="BLASTX similarity to PID (239..273); match: 0.54, FT score: 4.4e-11; database searched: nr; (Z71181) K07C5.5 FT [Caenorhabditis elegans]" FT misc_feature complement(15338582..15338718) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 85.000~(35217..35202) FT DDS similarity to AA160909 zo79e05.s1 Stratagene pancreas FT (#937208) Homo sapiens cDNA clone 593120 3' similar to FT WP:K02F3.6 CE01352 ; (16..1); 100% identity." FT misc_feature complement(15338771..15338911) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 93.000" FT misc_feature complement(15338778..15338879) FT /note="BLASTX similarity to PID (196..229); match: 0.23, FT score: 4.4e-11; database searched: nr; (Z71181) K07C5.5 FT [Caenorhabditis elegans]" FT misc_feature complement(15338808..15338911) FT /note="DDS similarity to A160909 zo79e05.s1 Stratagene FT pancreas (#937208) Homo sapiens cDNA clone 593120 3' FT similar to WP:K02F3.6 CE01352 ; (120..17); 100% identity." FT repeat_region complement(15339189..15339275) FT /rpt_family="LINE2" FT repeat_region complement(15339328..15339629) FT /rpt_family="AluY" FT repeat_region 15339632..15339817 FT /rpt_family="AluJo" FT repeat_region complement(15339837..15339903) FT /rpt_family="LINE2" FT repeat_region 15339909..15340129 FT /rpt_family="AluSx" FT repeat_region 15340130..15340421 FT /rpt_family="AluSx" FT repeat_region 15340424..15340716 FT /rpt_family="AluSc" FT repeat_region 15340717..15340767 FT /rpt_family="POLY_A" FT repeat_region 15340823..15340870 FT /rpt_family="MIR" FT repeat_region complement(15340978..15341281) FT /rpt_family="AluSx" FT repeat_region complement(15341290..15341602) FT /rpt_family="AluSq" FT misc_feature complement(15341773..15341901) FT /note="DDS similarity to overlapping ESTs: (38400..38272) FT AA160909 zo79e05.s1 Stratagene pancreas (#937208) Homo FT sapiens cDNA clone 593120 3' similar to WP:K02F3.6 CE01352 FT ; (254..121); 92% identity.~AA159939 zo79e05.r1 Stratagene FT pancreas (#937208) Homo sapiens cDNA clone 593120 5' FT similar to WP:K02F3.6 CE01352 ; (120..245); 93% identity." FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature complement(15341804..15341884) FT /note="BLASTX similarity to PID (148..174); match: 0.4, FT score: 3.2e-20; database searched: nr; (Z71181) K07C5.5 FT [Caenorhabditis elegans]" FT misc_feature complement(15341807..15341902) FT /note="BLASTX similarity to 485136 (266..297); match: 0.53, FT score: 1.6e-29; database searched: nr; (U00052) similar to FT epoxide hydrolase [Caenorhabditis elegans]" FT misc_feature complement(15342042..15342158) FT /note="BLASTX similarity to 485136 (230..268); match: 0.61, FT score: 1.6e-29; database searched: nr; (U00052) similar to FT epoxide hydrolase [Caenorhabditis elegans]" FT misc_feature complement(15342050..15342169) FT /note="DDS similarity to overlapping ESTs: (38668..38549) FT AA159939 zo79e05.r1 Stratagene pancreas (#937208) Homo FT sapiens cDNA clone 593120 5' similar to WP:K02F3.6 CE01352 FT ; (1..119); 97% identity.~(38600..38549) AA160909 FT zo79e05.s1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 593120 3' similar to WP:K02F3.6 CE01352 ; (306..255); FT 100% identity." FT misc_feature complement(15342050..15342207) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature complement(15342060..15342206) FT /note="BLASTX similarity to PID (90..138); match: 0.36, FT score: 3.2e-20; database searched: nr; (Z71181) K07C5.5 FT [Caenorhabditis elegans]" FT misc_feature complement(15342165..15342206) FT /note="BLASTX similarity to 485136 (153..166); match: 0.5, FT score: 1.6e-29; database searched: nr; (U00052) similar to FT epoxide hydrolase [Caenorhabditis elegans]" FT misc_feature complement(15342577..15342663) FT /note="BLASTX similarity to PID (64..92); match: 0.51, FT score: 3.2e-20; database searched: nr; (Z71181) K07C5.5 FT [Caenorhabditis elegans]" FT /note="BLASTX similarity to 485136 (127..155); match: 0.62, FT score: 1.6e-29; database searched: nr; (U00052) similar to FT epoxide hydrolase [Caenorhabditis elegans]" FT misc_feature complement(15342780..15343156) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 77.000" FT repeat_region complement(15342828..15342877) FT /rpt_family="GC_rich" FT repeat_region 15343406..15343707 FT /rpt_family="AluSq" FT repeat_region 15344594..15344886 FT /rpt_family="AluY" FT repeat_region complement(15344954..15345072) FT /rpt_family="MIR" FT repeat_region complement(15345192..15345412) FT /rpt_family="AluJo" FT repeat_region complement(15345810..15346116) FT /rpt_family="AluSx" FT misc_feature 15346334..15346589 FT /note="DDS similarity to T51949 yb29a03.s1 Homo sapiens FT cDNA clone 72556 3'. Score: 452 Identity: 247/270 (91%)." FT misc_feature 15346330..15346899 FT /note="DDS similarity to overlapping ESTs: (455..714) FT T51949 yb29a03.s1 Homo sapiens cDNA clone 72556 3'; Score: FT 452 Identity: 247/270 (91%). (1024..669) T52030 yb29a03.r1 FT Homo sapiens cDNA clone 72556 5'; Score: 615 Identity: FT 351/367 (95%)." FT misc_feature 15347646..15348208 FT /note="DDS similarity to overlapping ESTs: (1774..2177) FT N23663 yw40b10.s1 Homo sapiens cDNA clone 254683 3'. Score: FT 741 Identity: 399/407 (98%). (1774..2208) AA648513 FT ns21h09.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:1184321 similar to contains element LTR4 repetitive FT element; Score: 812 Identity: 431/438 (98%). (1771..2333) FT AA534457 nf80d06.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:926219; Score: 1019 Identity: 542/568 (95%). FT (1776..2180) AA278745 zs79g12.s1 NCI_CGAP_GCB1 Homo sapiens FT cDNA clone IMAGE:703750 3'; Score: 781 Identity: 402/404 FT (99%). (1800..2152) R34240 yh80f09.s1 Homo sapiens cDNA FT clone 136073 3' similar to contains TAR1 repetitive FT element; Score: 614 Identity: 346/363 (95%). (2249..1897) FT |N71602 yw40b10.r1 Homo sapiens cDNA clone 254683 5' FT similar to contains element MER6 repetitive element; Score: FT 588 Identity: 335/357 (93%). (2212..1967) AA304114 FT EST16821 Aorta endothelial cells, TNF alpha-treated Homo FT sapiens cDNA 5' end; Score: 443 Identity: 239/255 (93%)." FT repeat_region 15347822..15347848 FT /rpt_family="POLY_A" FT repeat_region 15347971..15348051 FT /rpt_family="(CAAAA)n" FT repeat_region complement(15348161..15348214) FT /rpt_family="POLY_A" FT misc_feature 15348188..15348948 FT /note="DDS similarity to overlapping ESTs: (2340..2685) FT AA458860 aa26d05.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:814377 3'; Score: 683 Identity: 345/345 (100%). FT (2787..2313) AA278877 zs79g12.r1 NCI_CGAP_GCB1 Homo sapiens FT cDNA clone IMAGE:703750 5' similar to contains element FT MER22 repetitive element; Score: 930 Identity: 473/475 FT (99%). (2341..2692) AA573302 nm52e03.s1 NCI_CGAP_Br2 Homo FT sapiens cDNA clone IMAGE:1071868; Score: 684 Identity: FT 347/352 (98%). (2342..2769) AA579808 nk43f03.s1 FT NCI_CGAP_GC2 Homo sapiens cDNA clone IMAGE:1016285; Score: FT 848 Identity: 426/428 (99%). (2345..2777) AA121152 FT zl88e01.s1 Stratagene colon (#937204) Homo sapiens cDNA FT clone 511704 3'; Score: 842 Identity: 430/433 (99%). FT (3003..2614) AA121132 zl88e01.r1 Stratagene colon (#937204) FT Homo sapiens cDNA clone 511704 5'; Score: 726 Identity: FT 383/386 (99%). (2496..2807) T07432 EST05321 Homo sapiens FT cDNA clone HFBEI95; Score: 565 Identity: 306/317 (96%). FT (2950..2560) R68397 yh99h03.r1 Homo sapiens cDNA clone FT 137909 5'. Score: 687 Identity: 382/396 (96%). FT (3073..2821) T85539 yd78h03.r1 Homo sapiens cDNA clone FT 114389 5'.Score: 463 Identity: 244/254 (96%). (3055..2902) FT AA666963 vr86d06.s1 Knowles Solter mouse 2 cell Mus FT musculus cDNA clone 1135595 5'; (355..514) 80% identity. FT And many others..." FT repeat_region 15348385..15348464 FT /rpt_family="POLY_A" FT repeat_region complement(15349651..15349733) FT /rpt_family="(CAG)n" FT misc_feature complement(15350277..15350333) FT /note="DDS similarity to AA666963 vr86d06.s1 Knowles Solter FT mouse 2 cell Mus musculus cDNA clone 1135595 5'; (298..354) FT 88% identity." FT misc_feature complement(15350470..15350632) FT /note="DDS similarity to AA666963 vr86d06.s1 Knowles Solter FT mouse 2 cell Mus musculus cDNA clone 1135595 5'; (135..297) FT 86% identity." FT misc_feature complement(15350721..15350848) FT /note="DDS similarity to AA666963 vr86d06.s1 Knowles Solter FT mouse 2 cell Mus musculus cDNA clone 1135595 5'; (1..134) FT 84% identity." FT repeat_region 15351143..15351183 FT /rpt_family="MER5A" FT repeat_region complement(15352622..15352924) FT /rpt_family="AluSx" FT repeat_region 15353897..15354020 FT /rpt_family="(TGG)n" FT misc_feature complement(15354026..15354280) FT /note="DDS similarity to AA057523 zf56e09.r1 Soares retina FT N2b4HR Homo sapiens cDNA clone 380968 5' similar to FT contains element MSR1 repetitive element; Score: 434 FT Identity: 236/255 (92%" FT repeat_region 15355275..15355415 FT /rpt_family="(TGG)n" FT repeat_region 15355415..15355461 FT /rpt_family="(CAGA)n" FT repeat_region complement(15355945..15356049) FT /rpt_family="MIR" FT misc_feature 15357869..15359460 FT /note="DDS similarity to overlapping ESTs: (11994..12459) FT N49889 yv24b06.s1 Homo sapiens cDNA clone 243635 3; Score: FT 893 Identity: 461/467 (98%). (12541..12078) AA493873 FT nh03d10.s1 NCI_CGAP_Thy1 Homo sapiens cDNA clone FT IMAGE:943219; Score: 809 Identity: 443/457 (96%). FT (12197..12697) AA429349 zv50g01.s1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 757104 3'; Score: 978 Identity: FT 495/501 (98%). (12197..12702) AA291401 zt38f02.s1 Soares FT ovary tumor NbHOT Homo sapiens cDNA clone 724635 3'; Score: FT 976 Identity: 500/506 (98%). (12197..12788) N45196 FT yz14a11.s1 Homo sapiens cDNA clone 283004 3; Score: 1068 FT Identity: 573/584 (98%). (12880..12348) AA625129 af70a09.r1 FT Soares NhHMPu S1 Homo sapiens cDNA clone 1047352 5'; Score: FT 1017 Identity: 527/528 (99%). (13237..12768) AA291565 FT zt38f02.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 724635 5'; Score: 895 Identity: 466/469 (99%). FT (13237..12850) AA428761 zv50g01.r1 Soares ovary tumor NbHOT FT Homo sapiens cDNA clone 757104 5'; Score: 776 Identity: FT 388/388 (100%).~Other overlapping EST matches: T51194" FT mRNA complement(15359330..>15383944) FT /gene="HUNK1" FT /product="H. sapiens HUNK1 (Y12059)" FT misc_feature complement(15359460..15360088) FT /gene="HUNK1" FT /note="DDS similarity to overlapping ESTs: (13964..13585) FT R84483 yo36f05.r1 Homo sapiens cDNA clone 180033 5'; Score: FT 668 Identity: 360/380 (94%). (14132..13748) AA349685 FT EST56553 Infant brain Homo sapiens cDNA 5' end; Score: 743 FT Identity: 380/386 (98%). (14213..13751) H30841 yo78c10.r1 FT Homo sapiens cDNA clone 184050 5'; Score: 885 Identity: FT 457/462 (98%). (14213..13839) R88182 ym90f03.r1 Homo FT sapiens cDNA clone 166205 5'; Score: 724 Identity: FT 372/377 (98%). (14226..14171) R29034 F0-114D 22 week old FT human fetal liver cDNA library Homo sapiens cDNA clone FT F0-114D 5'; (56..1) 100% identity. And many others." FT repeat_region 15362250..15362278 FT /rpt_family="POLY_G" FT misc_feature 15363445..15363893 FT /note="DDS similarity to AA262797 zs24f07.r1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:686149 5'; Score: 833 FT Identity: 435/446 (97%)." FT misc_feature complement(15364169..15364498) FT /gene="HUNK1" FT /note="DDS similarity to AA262781 zs24f07.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:686149 3'Score: 660 Identity: FT 330/330 (100%)." FT misc_feature 15364524..15365073 FT /note="DDS similarity to overlapping ESTs: (18649..19119) FT N23192 yx76h09.s1 Homo sapiens cDNA clone 267713 3'; Score: FT 901 Identity: 465/470 (98%). (19198..19052) N32654 FT yx76h09.r1 Homo sapiens cDNA clone 267713 5' similar to FT gb:D42040 RING3 PROTEIN (HUMAN); (291..441) 95% identity. FT (19198..19088) R29034 F0-114D 22 week old human fetal liver FT cDNA library Homo sapiens cDNA clone F0-114D 5'; (167..57) FT 100% identity." FT CDS complement(join(15364958..15365073,15366108..15366403, FT 15366875..15367074,15367775..15367984,15374231..15374359, FT 15375215..15375577,15376165..15376454,15378227..15378362, FT 15379716..15379853,15383626..>15383944)) FT /codon_start=2 FT /gene="HUNK1" FT /product="R31546_1" FT /note="Hypothetical partial human protein with strong FT homology to human RING3 sequence; Conceptual translation FT matches that of accession Y12059 encoded by Human HUNK1 FT mRNA" FT /protein_id="AAC27978.1" FT /translation="VPGEECDGITSMSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQ FT PQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLN FT LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA FT LEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTP FT QPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQS FT HPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVK FT PPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLH FT DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQ FT DVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEE FT RAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKA FT KEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINK FT LPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQA FT EKVDVIAGSSKMKGFSSSESESSSESSSSDSEDSETG" FT misc_feature complement(15366108..15366398) FT /gene="HUNK1" FT /note="DDS similarity to overlapping ESTs: (20290..20233) FT R29034 F0-114D 22 week old human fetal liver cDNA library FT Homo sapiens cDNA clone F0-114D 5' ; (226..168) 97% FT identity. (20523..20233) N32654 yx76h09.r1 Homo sapiens FT cDNA clone 267713 5' similar to gb:D42040 RING3 PROTEIN FT (HUMAN); (1..290) 97% identity. (20292..20487) AA592514 FT vo21g06.r1 Barstead mouse myotubes MPLRB5 Mus musculus cDNA FT clone 1050586 5' similar to gb:D42040 RING3 PROTEIN FT (HUMAN); (484..289) 80% identity." FT misc_feature 15366917..15367076 FT /note="DDS similarity to overlapping ESTs: (21199..21127) FT AA563817 nj20g08.s1 NCI_CGAP_AA1 Homo sapiens cDNA clone FT IMAGE:993086 similar to gb:D42040 RING3 PROTEIN (HUMAN); FT (280..73) 99% identity. (21199..21119) AA115650 zl88e11.s1 FT Stratagene colon (#937204) Homo sapiens cDNA clone 511724 FT 3' similar to gb:D42040 RING3 PROTEIN (HUMAN); (80..1) 90% FT identity. (21199..21042) C77300 Mus musculus 3.5-dpc FT blastocyst cDNA 3'-end sequence, similar to Human mRNA for FT KIAA0043 gene, complete cds; (158..1) 93% identity. FT (21150..21201) H90698 yv03f06.s1 Homo sapiens cDNA clone FT 241667 3' similar to gb:D42040 RING3 PROTEIN (HUMAN); FT (1..52) 98% identity." FT repeat_region complement(15366925..15367023) FT /rpt_family="(GAAAA)n" FT misc_feature 15367775..15367987 FT /note="DDS similarity to overlapping ESTs: (22109..21900) FT AA563817 nj20g08.s1 NCI_CGAP_AA1 Homo sapiens cDNA clone FT IMAGE:993086 similar to gb:D42040 RING3 PROTEIN (HUMAN); FT (280..98) 99% identity. (22109..21900) AA115650 zl88e11.s1 FT Stratagene colon (#937204) Homo sapiens cDNA clone 511724 FT 3' similar to gb:D42040 RING3 PROTEIN (HUMAN); (289..81) FT 99% identity. (22109..21900) C77300 Mus musculus 3.5-dpc FT blastocyst cDNA 3'-end sequence, similar to Human mRNA for FT KIAA0043 gene, complete cds; (368..159) 86% identity. FT (21902..22112) H90698 yv03f06.s1 Homo sapiens cDNA clone FT 241667 3' similar to gb:D42040 RING3 PROTEIN (HUMAN); FT (53..263) 99% identity. (22109..22018) AA115649 zl88e11.r1 FT Stratagene colon (#937204) Homo sapiens cDNA clone 511724 FT 5' similar to gb:D42040 RING3 PROTEIN (HUMAN); (433..525) FT 89% identity." FT repeat_region complement(15369144..15369394) FT /rpt_family="AluSg1" FT repeat_region complement(15369415..15369704) FT /rpt_family="AluJb" FT repeat_region 15372016..15372312 FT /rpt_family="AluSg" FT repeat_region 15372470..15372647 FT /rpt_family="AluJb" FT repeat_region complement(15372701..15372735) FT /rpt_family="AT_rich" FT repeat_region 15373238..15373351 FT /rpt_family="AluJo" FT repeat_region 15373381..15373553 FT /rpt_family="AluJo" FT misc_feature 15373576..15374021 FT /note="DDS similarity to AA514314 nf56a03.s1 NCI_CGAP_Co3 FT Homo sapiens cDNA clone IMAGE:923884; Score: 892 Identity: FT 446/446 (100%)." FT misc_feature 15374231..15374359 FT /note="DDS similarity to overlapping ESTs: (28484..28356) FT AA563817 nj20g08.s1 NCI_CGAP_AA1 Homo sapiens cDNA clone FT IMAGE:993086 similar to gb:D42040 RING3 PROTEIN (HUMAN); FT (408..281) 99% identity. (28484..28356) AA115650 zl88e11.s1 FT Stratagene colon (#937204) Homo sapiens cDNA clone 511724 FT 3' similar to gb:D42040 RING3 PROTEIN (HUMAN); (417..290) FT 99% identity. (28484..28356) C77300 Mus musculus 3.5-dpc FT blastocyst cDNA 3'-end sequence, similar to Human mRNA for FT KIAA0043 gene, complete cds; (496..369) 88% identity. FT (28358..28462) H90698 yv03f06.s1 Homo sapiens cDNA clone FT 241667 3' similar to gb:D42040 RING3 PROTEIN (HUMAN); FT (263..368) 96% identity. (28484..28356) AA115649 zl88e11.r1 FT Stratagene colon (#937204) Homo sapiens cDNA clone 511724 FT 5' similar to gb:D42040 RING3 PROTEIN (HUMAN); (305..432) FT 99% identity." FT misc_feature complement(15375215..15375519) FT /gene="HUNK1" FT /note="DDS similarity to overlapping ESTs: (29374..29340) FT AA563817 nj20g08.s1 NCI_CGAP_AA1 Homo sapiens cDNA clone FT IMAGE:993086 similar to gb:D42040 RING3 PROTEIN (HUMAN); FT (443..409) 100% identity. (29402..29340) AA115650 FT zl88e11.s1 Stratagene colon (#937204) Homo sapiens cDNA FT clone 511724 3' similar to gb:D42040 RING3 PROTEIN (HUMAN); FT (484..418) 91% identity. (29427..29340) dbj|C77300|C77300 FT Mus musculus 3.5-dpc blastocyst cDNA 3'-end sequence, FT similar to Human mRNA for KIAA0043 gene, complete cds; FT (584..497) 92% identity. (29644..29340) AA115649 zl88e11.r1 FT Stratagene colon (#937204) Homo sapiens cDNA clone 511724 FT 5' similar to gb:D42040 RING3 PROTEIN (HUMAN); (1..304) 99% FT identity." FT misc_feature complement(15376230..15376377) FT /gene="HUNK1" FT /note="DDS similarity to overlapping ESTs: (30502..30356) FT T99211 ye63a02.s1 Homo sapiens cDNA clone 122378 3' similar FT to contains MER4 repetitive element; Score: 192 Identity: FT 137/155 (88%). (30355..30438) T91045 yd59b02.s1 Homo FT sapiens cDNA clone 112491 3' similar to gb:J05158 FT CARBOXYPEPTIDASE N 83 KD CHAIN (HUMAN);contains MER4 FT repetitive element; Score: 121 Identity: 80/88 (90%)." FT misc_feature complement(15378271..15378362) FT /gene="HUNK1" FT /note="DDS similarity to overlapping ESTs: (32487..32343) FT AA085917 zl90b09.r1 Stratagene colon (#937204) Homo sapiens FT cDNA clone 511865 5' similar to gb:D42040 RING3 PROTEIN FT (HUMAN); (251..400) 93% identity. (32487..32396) AA158664 FT zo78a09.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 592984 5' similar to gb:D42040 RING3 PROTEIN (HUMAN); FT (341..434) 86% identity. (32487..32460) R22342 yh26g12.r1 FT Homo sapiens cDNA clone 130918 5' similar to gb:D42040 FT RING3 PROTEIN (HUMAN); (396..425) 80% identity." FT misc_feature complement(15378965..15379051) FT /gene="HUNK1" FT /note="DDS similarity to R22342 yh26g12.r1 Homo sapiens FT cDNA clone 130918 5' similar to gb:D42040 RING3 PROTEIN FT (HUMAN); (306..395) 92% identity." FT misc_feature complement(15379716..15379853) FT /gene="HUNK1" FT /note="DDS similarity to overlapping ESTs: (33978..33841) FT AA085917 zl90b09.r1 Stratagene colon (#937204) Homo sapiens FT cDNA clone 511865 5' similar to gb:D42040 RING3 PROTEIN FT (HUMAN); (113..250) 100% identity. (33978..33841) |AA158664 FT zo78a09.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 592984 5' similar to gb:D42040 RING3 PROTEIN (HUMAN); FT (201..340) 98% identity. (33978..33841) R22342 yh26g12.r1 FT Homo sapiens cDNA clone 130918 5' similar to gb:D42040 FT RING3 PROTEIN (HUMAN); (168..305) 100% identity." FT repeat_region complement(15380524..15380547) FT /rpt_family="AT_rich" FT repeat_region 15382116..15382266 FT /rpt_family="LINE2" FT misc_feature complement(15383626..15383824) FT /gene="HUNK1" FT /note="DDS similarity to overlapping ESTs: (37862..37751) FT AA085917 zl90b09.r1 Stratagene colon (#937204) Homo sapiens FT cDNA clone 511865 5' similar to gb:D42040 RING3 PROTEIN FT (HUMAN); (1..112) 98% identity. (37949..37751) AA158664 FT zo78a09.r1 Stratagene pancreas (#937208) Homo sapiens cDNA FT clone 592984 5' similar to gb:D42040 RING3 PROTEIN (HUMAN); FT (1..200) 100% identity. (37917..37751) R22342 yh26g12.r1 FT Homo sapiens cDNA clone 130918 5' similar to gb:D42040 FT RING3 PROTEIN (HUMAN); (1..167) 100% identity." FT misc_feature 15384636..15385236 FT /note="DDS similarity to overlapping ESTs: (38761..39361) FT AA521443 aa69d02.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:826179 3'; Score: 1035 Identity: 568/594 (95%). FT (38772..39248) AA599108 ae51h08.s1 Stratagene lung FT carcinoma 937218 Homo sapiens cDNA clone 950463 3'; Score: FT 945 Identity: 476/476 (100%)." FT repeat_region complement(15385677..15385967) FT /rpt_family="AluSx" FT repeat_region complement(15386157..15386199) FT /rpt_family="MIR" FT repeat_region 15386536..15386825 FT /rpt_family="AluSq" FT repeat_region 15388313..15388372 FT /rpt_family="Alu" FT repeat_region 15422331..15422366 FT /rpt_family="Alu" FT repeat_region 15422146..15422204 FT /rpt_family="L1" FT repeat_region 15421840..15422119 FT /rpt_family="Alu" FT repeat_region complement(15421025..15421596) FT /rpt_family="Alu" FT misc_feature 15420296..15420497 FT /note="DPS similarity to sp|P25440|RNG3_HUMAN RING3 PROTEIN FT (KIAA9001) gi|1082363|pir||A56619 female sterile homeotic FT (fsh) homolog RING3 - human; gi|31472 (X62083) FSH gene FT product [Homo sapiens]; gi| 182769 (M80613) putative [Homo FT sapiens]; (67..1); 72% identity.~(2211..1893) predicted FT exon, program: grail2exons_human_1.3, frame: 2, quality: FT excellent, score: 77.000~(2005..1893) DDS similarity to FT AA085917 zl90b09.r1 Stratagene colon (#937204) Homo sapiens FT cDNA clone 511865 5' similar to gb:D42040 RING3 PROTEIN FT (HUMAN);(1..113); 97% identity.~(1893..2050) DDS similarity FT to AA087177 mk20h07.r1 Soares mouse p3NMF19.5 Mus musculus FT cDNA clone 493501 5' similar to gb:D42040 RING3 PROTEIN FT (HUMAN);(139..296); 80% identity.~2060..1893) DDS FT similarity to R22328 yh26e12.r1 Homo sapiens cDNA clone FT 130894 5' similar to gb:D42040 RING3 PROTEIN FT (HUMAN);(1..168); 100% identity." FT repeat_region 15419549..15420166 FT /rpt_family="Alu" FT repeat_region 15419070..15419410 FT /rpt_family="Alu" FT repeat_region 15418652..15418944 FT /rpt_family="Alu" FT repeat_region complement(15416161..15417842) FT /rpt_family="Tigger1" FT repeat_region complement(15417111..15417413) FT /rpt_family="Alu" FT misc_feature 15416141..15416245 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 52.000" FT repeat_region complement(15415836..15416141) FT /rpt_family="Alu" FT misc_feature complement(15414550..15414683) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 57.000" FT repeat_region 15413512..15413836 FT /rpt_family="Alu" FT repeat_region 15413264..15413497 FT /rpt_family="Alu" FT repeat_region 15412101..15412989 FT /rpt_family="Alu" FT repeat_region 15411371..15411540 FT /rpt_family="L1" FT repeat_region 15411101..15411386 FT /rpt_family="Alu" FT misc_feature complement(15410794..15411131) FT /note="DDS similarity to H00081 ph8c08u_19/1TV Homo sapiens FT cDNA clone ph8c08u_19/1TV. Score: 642 Identity: 332/336 FT (98%).~(11404..114940 predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: marginal, score: FT 45.000" FT repeat_region 15410800..15411041 FT /rpt_family="Alu" FT repeat_region 15409167..15409449 FT /rpt_family="Alu" FT repeat_region 15406871..15407079 FT /rpt_family="Alu" FT repeat_region 15406508..15406791 FT /rpt_family="Alu" FT repeat_region 15403308..15403606 FT /rpt_family="Alu" FT misc_feature complement(15402969..15403171) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 54.000" FT misc_feature complement(15401673..15402325) FT /note="Overlapping EST matches: (20057..20345) DDS FT similarity to AA004308 zh91c04.s1 Soares fetal liver spleen FT 1NFLS S1 Homo sapiens cDNA clone 428646 3'.Score: 465 FT Identity: 271/294 (92%).~(20709..20262) DDS similarity to FT AA004397 zh91c04.r1 Soares fetal liver spleen 1NFLS S1 Homo FT sapiens cDNA clone 428646 5'. Score: 697 Identity: 427/467 FT (91%)." FT repeat_region 15400089..15400351 FT /rpt_family="Alu" FT misc_feature 15400190..15400277 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 95.000" FT repeat_region 15399130..15399215 FT /rpt_family="Alu" FT repeat_region complement(15398589..15398867) FT /rpt_family="Alu" FT repeat_region complement(15398223..15398343) FT /rpt_family="Alu" FT repeat_region complement(15397601..15397660) FT /rpt_family="MER3" FT repeat_region complement(15397280..15397341) FT /rpt_family="MER33" FT repeat_region 15396144..15396392 FT /rpt_family="Alu" FT misc_feature 15395361..15395557 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 88.000" FT repeat_region 15393660..15393762 FT /rpt_family="Alu" FT repeat_region 15392557..15392823 FT /rpt_family="Alu" FT repeat_region complement(15389659..15389943) FT /rpt_family="Alu" FT misc_feature complement(15389348..15389457) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 74.000~(33133..32791) DDS FT similarity to M78531 EST00679 Homo sapiens cDNA clone FT HFBCD86. Score: 675 Identity: 342/344 (99%)." FT repeat_region 15389085..15389372 FT /rpt_family="Alu" FT repeat_region 15388657..15388934 FT /rpt_family="Alu" FT misc_feature complement(15388629..15388787) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 55.000" FT repeat_region 15388322..15388605 FT /rpt_family="Alu" FT repeat_region 15422320..15422631 FT /rpt_family="AluSq" FT repeat_region 15422647..15422840 FT /rpt_family="L1MB1" FT repeat_region 15423038..15423159 FT /rpt_family="AluSq/x" FT repeat_region 15423163..15423462 FT /rpt_family="AluSq" FT repeat_region 15423465..15423757 FT /rpt_family="AluSx" FT repeat_region 15423768..15423889 FT /rpt_family="AluJb" FT repeat_region 15423901..15424203 FT /rpt_family="AluY" FT repeat_region 15424204..15424493 FT /rpt_family="AluSq" FT repeat_region 15424653..15424718 FT /rpt_family="LINE2" FT repeat_region 15425372..15425499 FT /rpt_family="LINE2" FT repeat_region complement(15425544..15425643) FT /rpt_family="MER3" FT misc_feature complement(15426164..15426273) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 52.000" FT repeat_region 15426384..15426664 FT /rpt_family="AluSq" FT repeat_region 15426685..15426986 FT /rpt_family="AluY" FT repeat_region 15427160..15427422 FT /rpt_family="AluSq" FT repeat_region 15427941..15428084 FT /rpt_family="MIR" FT repeat_region 15428414..15428454 FT /rpt_family="(TGG)n" FT repeat_region 15429999..15430278 FT /rpt_family="AluJb" FT repeat_region 15430279..15430442 FT /rpt_family="AluJo/FRAM" FT repeat_region 15430462..15430766 FT /rpt_family="AluJb" FT repeat_region 15431763..15432054 FT /rpt_family="AluSx" FT repeat_region 15432056..15432128 FT /rpt_family="(GAAA)n" FT repeat_region complement(15433082..15433200) FT /rpt_family="AluY" FT repeat_region 15433240..15433371 FT /rpt_family="AluY" FT repeat_region 15433383..15433697 FT /rpt_family="AluY" FT repeat_region 15433698..15433880 FT /rpt_family="AluYa5" FT repeat_region 15433899..15434005 FT /rpt_family="FLAM_A" FT repeat_region complement(15434077..15434136) FT /rpt_family="MIR" FT repeat_region complement(15434787..15434879) FT /rpt_family="MIR" FT misc_feature 15435748..15435913 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 83.000" FT repeat_region complement(15435972..15436086) FT /rpt_family="MIR" FT repeat_region 15436539..15436828 FT /rpt_family="AluSp" FT repeat_region complement(15436962..15436985) FT /rpt_family="AT_rich" FT repeat_region 15436986..15437308 FT /rpt_family="AluSx" FT misc_feature 15437539..15437647 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 80.000" FT repeat_region 15437984..15438067 FT /rpt_family="L1MB8" FT repeat_region 15438068..15438374 FT /rpt_family="AluSx" FT repeat_region 15438375..15438814 FT /rpt_family="L1MB8" FT repeat_region complement(15439479..15439585) FT /rpt_family="LINE2" FT repeat_region complement(15439586..15439882) FT /rpt_family="AluSp" FT repeat_region 15440270..15440567 FT /rpt_family="AluSc" FT misc_feature 15440583..15440845 FT /note="BLASTN similarity to T41380 (105..368); match: 0.99, FT score: 3.8e-100; database searched: est; ph1b12_19/1TV Homo FT sapiens cDNA clone ph1b12_19/1TV." FT repeat_region 15441295..15441580 FT /rpt_family="AluSx" FT repeat_region complement(15442544..15442678) FT /rpt_family="GC_rich" FT repeat_region complement(15442679..15442706) FT /rpt_family="(GGA)n" FT repeat_region complement(15442748..15442832) FT /rpt_family="(CGGG)n" FT repeat_region complement(15442859..15443011) FT /rpt_family="GC_rich" FT repeat_region complement(15443114..15443229) FT /rpt_family="(CGGG)n" FT repeat_region complement(15443226..15443347) FT /rpt_family="(CGG)n" FT repeat_region 15443359..15443436 FT /rpt_family="(CG)n" FT repeat_region complement(15443887..15444162) FT /rpt_family="AluJo" FT repeat_region 15444196..15444341 FT /rpt_family="AluSx" FT repeat_region 15444342..15444634 FT /rpt_family="AluY" FT repeat_region 15444635..15444812 FT /rpt_family="AluSx" FT repeat_region complement(15445069..15445361) FT /rpt_family="AluJo" FT repeat_region 15445407..15445706 FT /rpt_family="AluSx" FT repeat_region 15445743..15446045 FT /rpt_family="AluSx" FT repeat_region complement(15446333..15446461) FT /rpt_family="FRAM" FT repeat_region 15446474..15446611 FT /rpt_family="AluSx" FT repeat_region 15446614..15446948 FT /rpt_family="AluSq" FT repeat_region 15446949..15447115 FT /rpt_family="AluSx" FT repeat_region complement(15447116..15447194) FT /rpt_family="AluJb" FT repeat_region 15447554..15447846 FT /rpt_family="AluY" FT repeat_region complement(15448224..15448520) FT /rpt_family="AluSx" FT repeat_region complement(15448524..15448708) FT /rpt_family="AluJo" FT repeat_region complement(15448716..15448877) FT /rpt_family="FAM" FT repeat_region complement(15448971..15449271) FT /rpt_family="AluSx" FT repeat_region complement(15449292..15449384) FT /rpt_family="7SLRNA" FT repeat_region 15449476..15449769 FT /rpt_family="AluSx" FT misc_feature 15449801..15449998 FT /note="BLASTX similarity to 619788 (14..79); match: 0.5, FT score: 6.7e-17; database searched: nr; (L38826) L21 FT ribosomal protein [Homo sapiens]" FT misc_feature 15449914..15450024 FT /note="BLASTX similarity to 619788 (52..88); match: 0.81, FT score: 7.0e-15; database searched: nr; (L38826) L21 FT ribosomal protein [Homo sapiens]" FT repeat_region 15450036..15450270 FT /rpt_family="AluSg/x" FT repeat_region 15450351..15450655 FT /rpt_family="AluJb" FT repeat_region 15450666..15450967 FT /rpt_family="AluSx" FT repeat_region 15451163..15451237 FT /rpt_family="MER58B" FT repeat_region complement(15451260..15451550) FT /rpt_family="AluSx" FT repeat_region complement(15451551..15451723) FT /rpt_family="AluJ" FT repeat_region complement(15451725..15452023) FT /rpt_family="AluSg" FT repeat_region complement(15452026..15452167) FT /rpt_family="AluJ" FT repeat_region 15452188..15452336 FT /rpt_family="MER58B" FT repeat_region complement(15452337..15452357) FT /rpt_family="AT_rich" FT repeat_region complement(15452358..15452657) FT /rpt_family="AluSp" FT repeat_region 15452661..15452757 FT /rpt_family="MER58B" FT repeat_region 15452840..15453138 FT /rpt_family="AluY" FT repeat_region complement(15453138..15453413) FT /rpt_family="AluJb" FT repeat_region complement(15453469..15453515) FT /rpt_family="L1MC2" FT repeat_region 15453516..15453814 FT /rpt_family="AluSx" FT repeat_region 15453820..15454115 FT /rpt_family="AluSp" FT repeat_region complement(15454116..15454337) FT /rpt_family="L1MC2" FT repeat_region 15454338..15454637 FT /rpt_family="AluJb" FT repeat_region complement(15454665..15454967) FT /rpt_family="AluJo" FT repeat_region complement(15454995..15455314) FT /rpt_family="AluSp" FT repeat_region complement(15455315..15455439) FT /rpt_family="AluJb" FT repeat_region complement(15455459..15455758) FT /rpt_family="AluSp" FT repeat_region 15456461..15456756 FT /rpt_family="AluSx" FT repeat_region 15456781..15457072 FT /rpt_family="AluJo" FT repeat_region 15457185..15457218 FT /rpt_family="(CA)n" FT repeat_region 15457337..15457638 FT /rpt_family="AluSq" FT repeat_region complement(15457673..15457965) FT /rpt_family="AluY" FT repeat_region complement(15457967..15457995) FT /rpt_family="AT_rich" FT repeat_region 15457996..15458291 FT /rpt_family="AluSx" FT repeat_region 15458297..15458583 FT /rpt_family="AluSg" FT repeat_region 15458594..15458877 FT /rpt_family="AluSc" FT repeat_region 15458950..15459247 FT /rpt_family="AluSc" FT repeat_region 15459358..15459657 FT /rpt_family="AluSx" FT repeat_region 15459658..15459958 FT /rpt_family="AluY" FT repeat_region complement(15460048..15460347) FT /rpt_family="AluSx" FT repeat_region complement(15460368..15460667) FT /rpt_family="AluSg1" FT repeat_region complement(15460670..15460959) FT /rpt_family="AluSx" FT repeat_region complement(15460976..15461151) FT /rpt_family="AluSx" FT repeat_region complement(15461152..15461459) FT /rpt_family="AluSq" FT repeat_region complement(15461461..15461595) FT /rpt_family="AluSx" FT repeat_region 15461625..15461832 FT /rpt_family="L1" FT repeat_region 15461834..15462135 FT /rpt_family="AluSx" FT repeat_region 15462142..15462444 FT /rpt_family="AluY" FT repeat_region complement(15462523..15462760) FT /rpt_family="AluSq" FT mRNA complement(join(15464969..15466181,15469778..15469873, FT 15471659..15471789,15472540..15472633,15472921..15473062, FT 15479046..15479133,15480957..15480990,15482763..15482809, FT 15483029..15483158,15483662..15484151,15484597..15484876, FT 15485414..15485446,15487787..15487825,15490524..15490603)) FT /product="H.sapiens mRNA for A-kinase anchoring protein FT AKAP95" FT repeat_region 15465359..15465397 FT /rpt_family="POLY_A" FT CDS complement(join(15465726..15466181,15469778..15469873, FT 15471659..15471789,15472540..15472633,15472921..15473062, FT 15479046..15479133,15480957..15480990,15482763..15482809, FT 15483029..15483158,15483662..15484151,15484597..15484876, FT 15485414..15485446,15487787..15487825,15490524..15490542)) FT /codon_start=1 FT /product="A-kinase anchoring protein 95" FT /protein_id="AAC62838.1" FT /translation="MDQGYGGYGAWSAGPANTQGAYGTGVASWQGYENYNYYGAQNTSV FT TTGATYSYGPASWEAAKANDGGLAAGAPAMHMASYGPEPCTDNSDSLIAKINQRLDMMS FT KEGGRGGSGGGGEGIQDRESSFRFQPFESYDSRPCLPEHNPYRPSYSYDYEFDLGSDRN FT GSFGGQYSECRDPARERGSLDGFMRGRGQGRFQDRSNPGTFMRSDPFVPPAASSEPLST FT PWNELNYVGGRGLGGPSPSRPPPSLFSQSMAPDYGVMGMQGAGGYDSTMPYGCGRSQPR FT MRDRDRPKRRGFDRFGPDGTGRKRKQFQLYEEPDTKLARVDSEGDFSENDDAAGDFRSG FT DEEFKGEDELCDSGRQRGEKEDEDEDVKKRREKQRRRDRTRDRAADRIQFACSVCKFRS FT FDDEEIQKHLQSKFHKETLRFISTKLPDKTVEFLQEYIVNRNKKIEKRRQELMEKETAK FT PKPDPFKGIGQEHFFKKIEAAHCLACDMLIPAQPQLLQRHLHSVDHNHNRRLAAEQFKK FT TSLHVAKSVLNNRHIVKMLEKYLKGEDPFTSETVDPEMEGDDNLGGEDKKETPEEVAAD FT VLAEVITAAVRAVDGEGAPAPESSGEPAEDEGPTDTAEAGSDPQAEQLLEEQVPCGTAH FT EKGVPKARSEAAEAGNGAETMAAEAESAQTRVAPAPAAADAEVEQTDAESKDAVPTE" FT repeat_region complement(15466373..15466548) FT /rpt_family="AluSg/x" FT repeat_region complement(15466553..15466846) FT /rpt_family="AluSp" FT repeat_region 15466930..15467243 FT /rpt_family="AluY" FT repeat_region 15467298..15467397 FT /rpt_family="FLAM_C" FT repeat_region 15467541..15467768 FT /rpt_family="AluY" FT repeat_region complement(15467770..15468069) FT /rpt_family="AluSg1" FT repeat_region 15468082..15468259 FT /rpt_family="AluY" FT repeat_region 15468260..15468426 FT /rpt_family="AluJo" FT repeat_region complement(15468523..15468793) FT /rpt_family="AluJb" FT repeat_region complement(15469168..15469450) FT /rpt_family="AluJo" FT repeat_region 15470250..15470539 FT /rpt_family="AluSx" FT repeat_region 15470663..15470966 FT /rpt_family="AluSq" FT repeat_region complement(15471007..15471113) FT /rpt_family="MIR" FT repeat_region complement(15472161..15472462) FT /rpt_family="AluY" FT repeat_region complement(15473170..15473994) FT /rpt_family="SVA" FT repeat_region complement(15474001..15474871) FT /rpt_family="SVA" FT repeat_region 15474872..15474938 FT /rpt_family="(TAAA)n" FT repeat_region complement(15474970..15475154) FT /rpt_family="AluSp" FT repeat_region complement(15475160..15475459) FT /rpt_family="AluSg" FT repeat_region complement(15475462..15475729) FT /rpt_family="AluJo" FT repeat_region 15476552..15476854 FT /rpt_family="AluSx" FT repeat_region 15476934..15477000 FT /rpt_family="POLY_A" FT repeat_region 15477020..15477103 FT /rpt_family="FLAM_C" FT repeat_region complement(15477104..15477138) FT /rpt_family="AT_rich" FT repeat_region complement(15477342..15477420) FT /rpt_family="AluS" FT repeat_region complement(15477429..15477719) FT /rpt_family="AluSp" FT repeat_region complement(15477722..15478016) FT /rpt_family="AluSx" FT repeat_region 15478059..15478357 FT /rpt_family="AluSg" FT repeat_region complement(15479063..15479135) FT /rpt_family="(GGA)n" FT repeat_region complement(15481441..15481740) FT /rpt_family="AluSg" FT repeat_region complement(15482303..15482594) FT /rpt_family="AluSx" FT repeat_region 15483284..15483612 FT /rpt_family="L1MB7" FT repeat_region complement(15486226..15486298) FT /rpt_family="MER58B" FT repeat_region 15486312..15486443 FT /rpt_family="L1MC2" FT repeat_region complement(15486446..15486748) FT /rpt_family="AluY" FT repeat_region complement(15486749..15487029) FT /rpt_family="AluJb" FT repeat_region 15487052..15487307 FT /rpt_family="AluSg" FT repeat_region complement(15487611..15487689) FT /rpt_family="MER58B" FT repeat_region complement(15488285..15488578) FT /rpt_family="AluY" FT repeat_region complement(15490049..15490077) FT /rpt_family="GC_rich" FT repeat_region complement(15490771..15490835) FT /rpt_family="(CGGG)n" FT repeat_region complement(15490899..15490954) FT /rpt_family="GC_rich" FT repeat_region 15491051..15491119 FT /rpt_family="(CGG)n" FT repeat_region complement(15491148..15491214) FT /rpt_family="(GGA)n" FT misc_feature complement(15491302..15491423) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(15493019..15493313) FT /rpt_family="AluSx" FT repeat_region 15493334..15493467 FT /rpt_family="MER46" FT repeat_region 15493498..15493672 FT /rpt_family="FAM" FT repeat_region 15493674..15493726 FT /rpt_family="MER46" FT repeat_region complement(15494018..15494304) FT /rpt_family="AluJo" FT repeat_region complement(15494742..15495040) FT /rpt_family="AluSg1" FT repeat_region complement(15495114..15495411) FT /rpt_family="AluSq" FT repeat_region complement(15495682..15495786) FT /rpt_family="AluY" FT repeat_region complement(15495787..15496087) FT /rpt_family="AluYa5" FT repeat_region complement(15496089..15496290) FT /rpt_family="AluY" FT repeat_region complement(15496409..15496709) FT /rpt_family="AluJb" FT repeat_region complement(15496723..15497020) FT /rpt_family="AluY" FT repeat_region complement(15497475..15497769) FT /rpt_family="AluSq" FT repeat_region 15498490..15498763 FT /rpt_family="AluSg" FT repeat_region 15498988..15499203 FT /rpt_family="L1M4" FT repeat_region 15499445..15499735 FT /rpt_family="AluY" FT repeat_region 15499744..15500055 FT /rpt_family="AluY" FT repeat_region 15500056..15500294 FT /rpt_family="L1M4" FT repeat_region 15500302..15500593 FT /rpt_family="AluSc" FT repeat_region 15500605..15500754 FT /rpt_family="L1M3/4" FT repeat_region complement(15500910..15500934) FT /rpt_family="AT_rich" FT repeat_region 15500945..15501249 FT /rpt_family="AluJb" FT repeat_region 15501257..15501986 FT /rpt_family="L1" FT repeat_region 15501990..15502288 FT /rpt_family="AluY" FT repeat_region complement(15502314..15502349) FT /rpt_family="AT_rich" FT repeat_region complement(15502350..15502647) FT /rpt_family="AluY" FT repeat_region complement(15502648..15502944) FT /rpt_family="AluJo" FT repeat_region complement(15502952..15502982) FT /rpt_family="AT_rich" FT repeat_region 15503025..15503324 FT /rpt_family="AluJb" FT repeat_region 15503325..15503424 FT /rpt_family="L1" FT repeat_region 15503426..15503720 FT /rpt_family="AluSq" FT repeat_region 15503723..15503844 FT /rpt_family="L1" FT repeat_region 15503847..15504450 FT /rpt_family="L1M4" FT repeat_region 15504451..15504511 FT /rpt_family="AluJ/FLAM" FT repeat_region 15504451..15504734 FT /rpt_family="AluSp" FT repeat_region 15504745..15505342 FT /rpt_family="L1MB7" FT repeat_region complement(15505356..15505518) FT /rpt_family="FRAM" FT repeat_region 15505519..15505590 FT /rpt_family="L1MB8" FT repeat_region complement(15505847..15506111) FT /rpt_family="AluY" FT repeat_region complement(15506135..15506423) FT /rpt_family="AluSc" FT repeat_region 15506514..15506813 FT /rpt_family="AluY" FT repeat_region 15506814..15506903 FT /rpt_family="LINE2" FT misc_feature complement(15507961..15508091) FT /note="DDS similarity to AA194868 zp75h05.r1 Stratagene FT HeLa cell s3 937216 Homo sapiens cDNA clone 626073 5' FT similar to TR:G1254984 AKAP95 ; (191..321); 99% FT identity.~~~DDS similarity to AA530390 vj48f02.r1 FT Stratagene mouse heart (#937316) Mus musculus cDNA clone FT 932283 5' similar to TR:G1254984 AKAP95 ; (351..481); 88% FT identity.~~(6458..6363) DDS similarity to AA426181 FT zw11d10.r1 Soares NhHMPu S1 Homo sapiens cDNA clone 768979 FT 5' similar to TR:G1254984 AKAP95 ; (386..480); 99% FT identity.~~(6458..6315) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 100.000" FT misc_feature complement(15508331..15508436) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to AA194868 zp75h05.r1 Stratagene HeLa cell s3 FT 937216 Homo sapiens cDNA clone 626073 5' similar to FT TR:G1254984 AKAP95 ; (85..190); 99% identity.~~DDS FT similarity to AA530390 vj48f02.r1 Stratagene mouse heart FT (#937316) Mus musculus cDNA clone 932283 5' similar to FT TR:G1254984 AKAP95 ; (244..350); 84% identity.~~DDS FT similarity to AA426181 zw11d10.r1 Soares NhHMPu S1 Homo FT sapiens cDNA clone 768979 5' similar to TR:G1254984 AKAP95 FT ; (280..385); 99% identity.~~(6803..6742) DDS similarity to FT AA315634 EST187399 Colon carcinoma (HCC) cell line II Homo FT sapiens cDNA 5' end similar to similar to A-kinase anchor FT protein 95; (324..385); 100% identity." FT misc_feature complement(15508525..15508666) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~(6975..6892) FT DDS similarity to AA194868 zp75h05.r1 Stratagene HeLa cell FT s3 937216 Homo sapiens cDNA clone 626073 5' similar to FT TR:G1254984 AKAP95 ; (1..84); 100% identity.~~DDS FT similarity to AA530390 vj48f02.r1 Stratagene mouse heart FT (#937316) Mus musculus cDNA clone 932283 5' similar to FT TR:G1254984 AKAP95 ; (102..243); 91% identity.~~DDS FT similarity to AA426181 zw11d10.r1 Soares NhHMPu S1 Homo FT sapiens cDNA clone 768979 5' similar to TR:G1254984 AKAP95 FT ; (138..279); 100% identity.~~DDS similarity to AA315634 FT EST187399 Colon carcinoma (HCC) cell line II Homo sapiens FT cDNA 5' end similar to similar to A-kinase anchor protein FT 95; (182..323); 99% identity." FT misc_feature complement(15509441..15509577) FT /note="DDS similarity to AA426181 zw11d10.r1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 768979 5' similar to TR:G1254984 FT AKAP95 ; (1..137); 98% identity.~~DDS similarity to FT AA315634 EST187399 Colon carcinoma (HCC) cell line II Homo FT sapiens cDNA 5' end similar to similar to A-kinase anchor FT protein 95; (45..181); 99% identity.~" FT misc_feature complement(15510113..15510221) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~(8581..8480) FT DDS similarity to AA530390 vj48f02.r1 Stratagene mouse FT heart (#937316) Mus musculus cDNA clone 932283 5' similar FT to TR:G1254984 AKAP95 ; (1..101); 87% FT identity.~~(8523..8480) DDS similarity to AA315634 FT EST187399 Colon carcinoma (HCC) cell line II Homo sapiens FT cDNA 5' end similar to similar to A-kinase anchor protein FT 95; (1..44); 89% identity.~" FT misc_feature complement(15511106..15511169) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 91.000" FT repeat_region complement(15511117..15511171) FT /rpt_family="(GAA)n" FT repeat_region complement(15511225..15511304) FT /rpt_family="MER41C" FT misc_feature complement(15511605..15511675) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 99.000~~(10042..9618) FT DDS similarity to AA523271 ni39g05.s1 NCI_CGAP_Lu1 Homo FT sapiens cDNA clone IMAGE:979256; (424..1); 97% FT identity.~~(9579..9964) AA548307 nj99g04.s1 NCI_CGAP_Pr11 FT Homo sapiens cDNA clone IMAGE:1000662; 3'-end; Score: 768 FT Identity: 385/386 (99%)." FT misc_feature complement(15511758..15511854) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to AA523271 ni39g05.s1 NCI_CGAP_Lu1 Homo sapiens FT cDNA clone IMAGE:979256; (521..425); 97% identity.~~DDS FT similarity to R35395 yg64f11.r1 Homo sapiens cDNA clone FT 37409 5'; (458..523); 80% identity.~" FT misc_feature complement(15511961..15512414) FT /note="DDS similarity to R35395 yg64f11.r1 Homo sapiens FT cDNA clone 37409 5'; (1..457); 94% FT identity.~~(10325..10691) AI083553 ox79c04.x1 FT Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1662534 3' FT similar to TR:Q63014 AKAP95; Score: 722 Identity: 364/367 FT (99%)." FT misc_feature complement(15511961..15512104) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to AA523271 ni39g05.s1 NCI_CGAP_Lu1 Homo sapiens FT cDNA clone IMAGE:979256; (611..522); 85% identity." FT misc_feature complement(15512089..15512215) FT /note="DDS similarity to overlapping ESTs:~H46982 FT yo16b01.s1 Homo sapiens cDNA clone 178057 3'; (186..64); FT 92% identity.~~H20329 yn62h06.s1 Homo sapiens cDNA clone FT 173051 3'; (188..63); 91% identity.~" FT misc_feature complement(15512288..15512414) FT /note="DDS similarity to overlapping ESTs:~H46982 FT yo16b01.s1 Homo sapiens cDNA clone 178057 3'; (313..187); FT 99% identity.~~H20329 yn62h06.s1 Homo sapiens cDNA clone FT 173051 3'; (315..189); 99% identity.~~(10781..10738) H18281 FT yn48f04.r1 Homo sapiens cDNA clone 171679 5' similar to FT contains L1 repetitive element; (415..463); 73% FT identity.~~(10781..10615) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 93.000" FT misc_feature complement(15514286..15514526) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(12893..12653) H18281 FT yn48f04.r1 Homo sapiens cDNA clone 171679 5' similar to FT contains L1 repetitive element; (167..414); 96% FT identity.~~(12893..12653) H46461 yo16f01.r1 Homo sapiens FT cDNA clone 178105 5'; (166..422); 93% FT identity.~~(12893..12653) AA064098 mj63b12.r1 Soares mouse FT p3NMF19.5 Mus musculus cDNA clone 480767 5' similar to FT TR:G1254984 G1254984 AKAP95; (192..432); 94% FT identity.~~(12893..12672) AA289773 vb21f10.r1 Soares mouse FT 3NbMS Mus musculus cDNA clone 749611 5'; (189..410); 96% FT identity.~(12790..12653) H46982 yo16b01.s1 Homo sapiens FT cDNA clone 178057 3'; (454..314); 91% FT identity.~~(12789..12653) H20329 yn62h06.s1 Homo sapiens FT cDNA clone 173051 3'; (459..316); 85% identity." FT repeat_region 15514530..15514609 FT /rpt_family="(CAGA)n" FT misc_feature complement(15514821..15514853) FT /note="DDS similarity to overlapping ESTs:~AA064098 FT mj63b12.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone FT 480767 5' similar to TR:G1254984 G1254984 AKAP95; FT (159..191); 100% identity.~~AA289773 vb21f10.r1 Soares FT mouse 3NbMS Mus musculus cDNA clone 749611 5'; (156..188); FT 100% identity.~~H18281 yn48f04.r1 Homo sapiens cDNA clone FT 171679 5' similar to contains L1 repetitive element; FT (134..166); 97% identity.~~H46461 yo16f01.r1 Homo sapiens FT cDNA clone 178105 5'; (133..165); 100% identity." FT repeat_region 15516063..15516358 FT /rpt_family="AluSx" FT repeat_region 15516457..15516752 FT /rpt_family="AluSg" FT repeat_region 15517174..15517215 FT /rpt_family="(GA)n" FT repeat_region complement(15517224..15517290) FT /rpt_family="(TA)n" FT repeat_region complement(15517291..15517575) FT /rpt_family="AluJb" FT repeat_region 15517792..15518086 FT /rpt_family="AluJo" FT repeat_region 15518379..15518818 FT /rpt_family="L1" FT repeat_region 15518824..15518955 FT /rpt_family="AluSq/x" FT repeat_region 15518979..15519088 FT /rpt_family="L1" FT repeat_region 15519094..15519394 FT /rpt_family="AluSp" FT repeat_region 15519413..15519701 FT /rpt_family="AluY" FT repeat_region 15519728..15520111 FT /rpt_family="L1" FT repeat_region complement(15520761..15521053) FT /rpt_family="AluSc" FT misc_feature complement(15521331..15521405) FT /note="DDS similarity to overlapping ESTs:~AA064098 FT mj63b12.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone FT 480767 5' similar to TR:G1254984 G1254984 AKAP95; FT (84..158); 86% identity.~~AA289773 vb21f10.r1 Soares mouse FT 3NbMS Mus musculus cDNA clone 749611 5'; (81..155); 87% FT identity.~~H18281 yn48f04.r1 Homo sapiens cDNA clone 171679 FT 5' similar to contains L1 repetitive element; (59..133); FT 100% identity.~~H46461 yo16f01.r1 Homo sapiens cDNA clone FT 178105 5'; (58..132); 100% identity." FT repeat_region complement(15521627..15521924) FT /rpt_family="AluJb" FT repeat_region 15522187..15522454 FT /rpt_family="AluJb" FT repeat_region 15522582..15522720 FT /rpt_family="AluSx" FT repeat_region 15522743..15523035 FT /rpt_family="AluSg" FT repeat_region 15523040..15523212 FT /rpt_family="AluSx" FT repeat_region complement(15523371..15523652) FT /rpt_family="AluSc" FT repeat_region complement(15524873..15525167) FT /rpt_family="AluSp" FT repeat_region complement(15525298..15525598) FT /rpt_family="AluY" FT repeat_region complement(15525609..15525876) FT /rpt_family="AluJb" FT repeat_region 15525963..15526261 FT /rpt_family="AluJo" FT repeat_region complement(15526313..15526410) FT /rpt_family="AluJo/FRAM" FT repeat_region 15526417..15526716 FT /rpt_family="AluY" FT repeat_region complement(15526722..15526934) FT /rpt_family="AluJo" FT repeat_region 15527172..15527486 FT /rpt_family="MLT1F" FT repeat_region complement(15528184..15528395) FT /rpt_family="MER20" FT repeat_region 15528766..15528970 FT /rpt_family="LINE2" FT misc_feature complement(15529722..15529779) FT /note="DDS similarity to overlapping ESTs:~H18281 FT yn48f04.r1 Homo sapiens cDNA clone 171679 5' similar to FT contains L1 repetitive element; (1..58); 100% FT identity.~~H46461 yo16f01.r1 Homo sapiens cDNA clone 178105 FT 5'; (1..57); 100% identity." FT repeat_region 15531654..15531945 FT /rpt_family="AluJb" FT repeat_region 15533793..15533866 FT /rpt_family="(GAA)n" FT CDS complement(join(15533887..15534046,15534994..15535189, FT 15535424..15535843,15536052..15536579,15537793..15538344, FT 15540397..>15540902)) FT /codon_start=2 FT /product="Human homolog of Mus musculus wizS protein [AA FT 171-934]" FT /note="One isoform product of a novel zinc finger gene FT 'wiz' in the cerebellum" FT /protein_id="AAC97985.1" FT /translation="AQSLTTCEVCGACFETRKGLSSHARSHLRQLGVAESESSGAPIDL FT LYELVKQKGLPDAHLGLPPGLAKKSSSLKEVVAGAPRPGLLSLAKPLDAPAVNKAIKSP FT PGFSAKGLGHPPSSPLLKKTPLALAGSPTPKNPEDKSPQLSLSPRPASPKAQWPQSEDE FT GPLNLTSGPEPARDIRCEFCGEFFENRKGLSSHARSHLRQMGVTEWYVNGSPIDTLREI FT LKRRTQSRPGGPPNPPGPSPKALAKMMGGAGPGSSLEARSPSDLHISPLAKKLPPPPGS FT PLGHSPTASPPPTARKMFPGLAAPSLPKKLKPEQIRVEIKREMLPGALHGELHPSEGPW FT GAPREDMTPLNLSSRAEPVRDIRCEFCGEFFENRKGLSSHARSHLRQMGVTEWSVNGSP FT IDTLREILKKKSKPCLIKKEPPAGDLAPALAEDGPPTVAPGPVQSPLPLSPLAGRPGKP FT GAGPAQVPRELSLTPITGAKPSATGYLGSVAAKRPLQEDRLLPAEVKAKTYIQTELPFK FT AKTLHEKTSHSSTEACCELCGLYFENRKALASHARAHLRQFGVTEWCVNGSPIETLSEW FT IKHRPQKVGAYRSYIQGGRPFTKKFRSAGHGRDSDKRPSLGLAPGGLAVVGRSAGGEPG FT PEAGRAADGGERPLAASPPGTVKAEEHQRQNINKFERRQARPPDASAARGGEDTNDLQQ FT KLEEVRQPPPRVRPVPSLVPRPPQTSLVKFVGNIYTLKCRFCEVEFQGPLSIQEEWVRH FT LQRHILEMNFSKADPPPEESQAPQAQTAAAEAP" FT misc_feature complement(15533933..15534046) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 91.000~~DDS similarity FT to ~(32413..32222) H85735 yv87b05.r1 Homo sapiens cDNA FT clone 249681 5'; (137..333); 95% identity." FT repeat_region 15534431..15534559 FT /rpt_family="MIR" FT repeat_region complement(15534609..15534820) FT /rpt_family="MIR" FT misc_feature complement(15534994..15535189) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(33556..33361) AA926846 FT om07c12.s1 Soares_NFL_T_GBC_ S1 Homo sapiens cDNA clone FT IMAGE:1540342 3'; (179..374); 98% identity.~(33420..33361) FT H85735 yv87b05.r1 Homo sapiens cDNA clone 249681 5'; FT (77..136); 100% identity." FT misc_feature complement(15535403..15535843) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 89.000~~DDS similarity FT to overlapping ESTs:~(34210..34065) AA937911 of72c12.s1 FT NCI_CGAP_Co8 Homo sapiens cDNA clone IMAGE:1435894 3'; FT (142..1); 95% identity.~~(34210..34066) AA402821 zu55g05.s1 FT Soares ovary tumor NbHOT Homo sapiens cDNA clone 741944 3'; FT (144..1); 99% identity.~~(34210..34066) AI082209 ox75h03.x1 FT Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1662197 3'; FT (145..1); 100% identity.~~(34210..34066) AI089392 FT qb09g09.x1 Soares _pregnant_uterus_NbHPU Homo sapiens cDNA FT clone IMAGE:1695808 3'; (145..1); 100% FT identity.~~(33969..33791) AA926846 om07c12.s1 FT Soares_NFL_T_GBC_ S1 Homo sapiens cDNA clone IMAGE:1540342 FT 3'; (1..178); 90% identity." FT misc_feature complement(15536052..15536579) FT /note="DDS similarity to overlapping ESTs:~(34946..34466) FT AA625249 af68a11.r1 Soares NhHMPu S1 Homo sapiens cDNA FT clone 1047164 5'; (129..590); 91% identity.~~(34697..34419) FT AI089392 qb09g09.x1 Soares_ pregnant_uterus_NbHPU Homo FT sapiens cDNA clone IMAGE:1695808 3'; (424..146); 100% FT identity.~~(34671..34419) AI082209 ox75h03.x1 FT Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1662197 3'; FT (398..146); 100% identity.~~(34653..34419) AA402821 FT zu55g05.s1 Soares ovary tumor NbHOT Homo sapiens cDNA clone FT 741944 3'; (379..145); 99% identity.~~(34561..34419) FT AA937911 of72c12.s1 NCI_CGAP_Co8 Homo sapiens cDNA clone FT IMAGE:1435894 3'; (285..143); 100% identity.~" FT misc_feature complement(15536309..15536579) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 89.000" FT repeat_region 15536600..15536738 FT /rpt_family="(GGA)n" FT repeat_region 15536926..15537021 FT /rpt_family="MIR" FT repeat_region complement(15537227..15537407) FT /rpt_family="MIR" FT misc_feature complement(15537793..15538338) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 89.000~~DDS similarity FT to overlapping ESTs:~(36711..36235) AA402169 zu55g07.r1 FT Soares ovary tumor NbHOT Homo sapiens cDNA clone 741948 5'; FT (155..630); 99% identity.~~(36288..36160) AA625249 FT af68a11.r1 Soares NhHMPu S1 Homo sapiens cDNA clone 1047164 FT 5'; (1..128); 98% identity." FT misc_feature complement(15538938..15539377) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 65.000" FT repeat_region complement(15539071..15539121) FT /rpt_family="GC_rich" FT misc_feature complement(15539090..15539319) FT /note="DDS similarity to overlapping ESTs:~(37686..37457) FT AA862545 oh44a10.s1 NCI_CGAP_GC4 Homo sapiens cDNA clone FT IMAGE:1469466 3'; (227..1); 96% identity.~~(37686..37519) FT AA864631 od45d10.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:1370899 3'; (167..1); 99% identity.~~(37686..37541) FT AA743120 ny19h05.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:1272249; (145..1); 99% identity." FT misc_feature complement(15540397..15540900) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 75.000~~DDS similarity FT to overlapping ESTs:~(39271..38944) AA474548 vh07h10.r1 FT Soares mouse mammary gland NbMMG Mus musculus cDNA clone FT 874819 5'~Score: 446 Identity: 278/326 FT (85%).~~(39265..39069) AA617630 np34g11.s1 NCI_CGAP_Lu1 FT Homo sapiens cDNA clone IMAGE:1118276; (186..384); 96% FT identity.~~(39088..38764) AA864631 od45d10.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:1370899 3'; (489..168); 93% FT identity.~~(38903..38764) AA743120 ny19h05.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:1272249; (283..146); 98% FT identity.~~(38864..38764) AA862545 oh44a10.s1 NCI_CGAP_GC4 FT Homo sapiens cDNA clone IMAGE:1469466 3'; (329..228); 78% FT identity." FT repeat_region complement(15540650..15540671) FT /rpt_family="GC_rich" FT repeat_region complement(15541090..15541149) FT /rpt_family="MIR" FT CDS complement(join(15533887..15534046,15534994..15535189, FT 15535424..15535843,15536052..15536579,15537793..15538344, FT 15540397..15540900,15547617..15547940,15549389..>15551411)) FT /codon_start=1 FT /product="Human homolog of Mus musculus wizL protein [AA FT 4-1561]" FT /protein_id="AAD19818.1" FT /translation="EAGEGILSERRFEDSVIVRTMKPHAELEGSRRFLHHRGEPRLLEK FT HAQGRPRFDWLQDEDEQGSPQDAGLHLDLPAQPPPLAPFRRVFVPVEDTPKTLDMAVVG FT GREDLEDLEGLAQPSEWGLPTSASEVATQTWTVNSEASVERLQPLLPPIRTGPYLCELL FT EEVAEGVASPDEDEDEEPAVFPCIECSIYFKQKEHLLEHMSQHRRAPGQEPPADLAPLA FT CGECGWAFADPTALEQHRQLHQASREKIIEEIQKLKQVPGDEGREARLQCPKCVFGTNS FT SRAYVQHAKLHMREPPGQTTKEPFGGSSGAGSPSPEASALLYQPYGAAVGLSACVFCGF FT PAPSESLLREHVRLVHAHPHWEEDGEAYEEDPASQPGTSQDAHACFPDTAVDYFGKAEP FT SLAPMWRENPAGYDPSLAFGPGCQQLSIRDFPLSKPLLHGTGQRPLGRLAFPSTLASTP FT YSLQLGRNKSTVHPQGLGERRRPWSEEEEEEEEEEDVVLTSEMDFSPENGVFSPLATPS FT LIPQAALELKQAFREALQAVEATQGQQQQLRGMVPIVLVAKLGPQVMAAARVPPRLQPE FT ELGLAGAHPLDFLLLDAPLGGPLGLDTLLDGDPAMALKHEERKCPYCPDRFHNGIGLAN FT HVRGHLNRVGVSYNVRHFISAEEVKAIERRFSFQKKKKKVANFDPGTFSLMRCDFCGAG FT FDTRAGLSSHARAHLRDFGITNWELTVSPINILQELLATSAAEQPPSPLGREPGGPPGS FT FLTSRRPRLPLTVPFPPTWAEDPGPAYGDAQSLTTCEVCGACFETRKGLSSHARSHLRQ FT LGVAESESSGAPIDLLYELVKQKGLPDAHLGLPPGLAKKSSSLKEVVAGAPRPGLLSLA FT KPLDAPAVNKAIKSPPGFSAKGLGHPPSSPLLKKTPLALAGSPTPKNPEDKSPQLSLSP FT RPASPKAQWPQSEDEGPLNLTSGPEPARDIRCEFCGEFFENRKGLSSHARSHLRQMGVT FT EWYVNGSPIDTLREILKRRTQSRPGGPPNPPGPSPKALAKMMGGAGPGSSLEARSPSDL FT HISPLAKKLPPPPGSPLGHSPTASPPPTARKMFPGLAAPSLPKKLKPEQIRVEIKREML FT PGALHGELHPSEGPWGAPREDMTPLNLSSRAEPVRDIRCEFCGEFFENRKGLSSHARSH FT LRQMGVTEWSVNGSPIDTLREILKKKSKPCLIKKEPPAGDLAPALAEDGPPTVAPGPVQ FT SPLPLSPLAGRPGKPGAGPAQVPRELSLTPITGAKPSATGYLGSVAAKRPLQEDRLLPA FT EVKAKTYIQTELPFKAKTLHEKTSHSSTEACCELCGLYFENRKALASHARAHLRQFGVT FT EWCVNGSPIETLSEWIKHRPQKVGAYRSYIQGGRPFTKKFRSAGHGRDSDKRPSLGLAP FT GGLAVVGRSAGGEPGPEAGRAADGGERPLAASPPGTVKAEEHQRQNINKFERRQARPPD FT ASAARGGEDTNDLQQKLEEVRQPPPRVRPVPSLVPRPPQTSLVKFVGNIYTLKCRFCEV FT EFQGPLSIQEEWVRHLQRHILEMNFSKADPPPEESQAPQAQTAAAEAP" FT CDS complement(join(15533887..15534046,15534994..15535189, FT 15535424..15535843,15536052..15536579,15537793..15538344, FT 15540397..15540900,15547617..>15547940)) FT /codon_start=3 FT /product="Human homolog of Mus musculus wizS protein [AA FT 64-934]" FT /protein_id="AAD19817.1" FT /translation="ANFDPGTFSLMRCDFCGAGFDTRAGLSSHARAHLRDFGITNWELT FT VSPINILQELLATSAAEQPPSPLGREPGGPPGSFLTSRRPRLPLTVPFPPTWAEDPGPA FT YGDAQSLTTCEVCGACFETRKGLSSHARSHLRQLGVAESESSGAPIDLLYELVKQKGLP FT DAHLGLPPGLAKKSSSLKEVVAGAPRPGLLSLAKPLDAPAVNKAIKSPPGFSAKGLGHP FT PSSPLLKKTPLALAGSPTPKNPEDKSPQLSLSPRPASPKAQWPQSEDEGPLNLTSGPEP FT ARDIRCEFCGEFFENRKGLSSHARSHLRQMGVTEWYVNGSPIDTLREILKRRTQSRPGG FT PPNPPGPSPKALAKMMGGAGPGSSLEARSPSDLHISPLAKKLPPPPGSPLGHSPTASPP FT PTARKMFPGLAAPSLPKKLKPEQIRVEIKREMLPGALHGELHPSEGPWGAPREDMTPLN FT LSSRAEPVRDIRCEFCGEFFENRKGLSSHARSHLRQMGVTEWSVNGSPIDTLREILKKK FT SKPCLIKKEPPAGDLAPALAEDGPPTVAPGPVQSPLPLSPLAGRPGKPGAGPAQVPREL FT SLTPITGAKPSATGYLGSVAAKRPLQEDRLLPAEVKAKTYIQTELPFKAKTLHEKTSHS FT STEACCELCGLYFENRKALASHARAHLRQFGVTEWCVNGSPIETLSEWIKHRPQKVGAY FT RSYIQGGRPFTKKFRSAGHGRDSDKRPSLGLAPGGLAVVGRSAGGEPGPEAGRAADGGE FT RPLAASPPGTVKAEEHQRQNINKFERRQARPPDASAARGGEDTNDLQQKLEEVRQPPPR FT VRPVPSLVPRPPQTSLVKFVGNIYTLKCRFCEVEFQGPLSIQEEWVRHLQRHILEMNFS FT KADPPPEESQAPQAQTAAAEAP" FT misc_feature complement(15541823..15541993) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA617630 np34g11.s1 FT NCI_CGAP_Lu1 Homo sapiens cDNA clone IMAGE:1118276; FT (16..186); 100% identity.~~AA853859 NHTBCae09d12f1 Normal FT Human Trabecular Bone Cells Homo sapiens cDNA clone FT NHTBCae09d12; (126..296); 98% identity.~" FT repeat_region complement(15543244..15543291) FT /rpt_family="GC_rich" FT repeat_region 15543305..15543415 FT /rpt_family="(CGG)n" FT repeat_region complement(15543416..15543468) FT /rpt_family="GC_rich" FT repeat_region complement(15543523..15543631) FT /rpt_family="GC_rich" FT misc_feature complement(15543976..15544083) FT /note="DDS similarity to AA853859 NHTBCae09d12f1 Normal FT Human Trabecular Bone Cells Homo sapiens cDNA clone FT NHTBCae09d12; (19..125); 98% identity.~" FT repeat_region 15544784..15545088 FT /rpt_family="AluSx" FT repeat_region 15545091..15545412 FT /rpt_family="AluY" FT repeat_region 15545759..15546053 FT /rpt_family="AluSg" FT repeat_region 15546133..15546263 FT /rpt_family="FLAM_C" FT repeat_region 15546364..15546640 FT /rpt_family="AluSx" FT repeat_region 15546652..15546947 FT /rpt_family="AluSx" FT repeat_region complement(15546994..15547113) FT /rpt_family="MER3" FT repeat_region 15547134..15547372 FT /rpt_family="MIR" FT misc_feature complement(15547617..15547940) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 91.000~~(24161..24027) FT DDS similarity to AA402169 zu55g07.r1 Soares ovary tumor FT NbHOT Homo sapiens cDNA clone 741948 5'; (19..154); 99% FT identity." FT repeat_region 15548193..15548488 FT /rpt_family="AluJo" FT repeat_region 15548806..15548845 FT /rpt_family="(CA)n" FT repeat_region 15549023..15549143 FT /rpt_family="LINE2" FT misc_feature complement(15549330..15551351) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 93.000" FT repeat_region complement(15549931..15549967) FT /rpt_family="(GGA)n" FT repeat_region 15552123..15552183 FT /rpt_family="MIR" FT repeat_region complement(15552642..15552665) FT /rpt_family="AT_rich" FT repeat_region 15552716..15553013 FT /rpt_family="AluSx" FT repeat_region complement(15553101..15553205) FT /rpt_family="MIR" FT repeat_region complement(15553890..15554182) FT /rpt_family="AluSx" FT repeat_region 15554183..15554387 FT /rpt_family="LINE2" FT repeat_region 15554421..15554615 FT /rpt_family="LINE2" FT repeat_region complement(15555204..15555408) FT /rpt_family="MER20" FT misc_feature 15555738..15555893 FT /note="BLASTN similarity to AQ343322 (4..159); match: 0.99, FT score: 2.2e-55; database searched: month.na; FT RPCI11-112L5.TV RPCI11 Homo sapiens genomic clone R-112L5, FT genomic survey sequence [Homo sapiens]" FT repeat_region 15707709..15710239 FT /rpt_family="LINE" FT /note="repeat match = L1000324; putative" FT misc_feature 15707721..15708064 FT /note="predicted exon, grail2exons_human_1.3; frame=2, FT forward strand, quality=good; putative" FT misc_feature 15709370..15709490 FT /note="predicted exon, grail2exons_human_1.3; frame=0, FT forward strand, quality=good; putative" FT misc_feature 15709850..15709984 FT /note="predicted exon, grail2exons_human_1.3; frame=2, FT forward strand, quality=marginal; putative" FT misc_feature 15710022..15710090 FT /note="predicted exon, grail2exons_human_1.3; frame=1, FT forward strand, quality=excellent; putative" FT repeat_region 15710201..15710254 FT /rpt_family="LINE" FT /note="repeat match = L1000316; putative" FT misc_feature 15710263..15710318 FT /note="predicted exon, grail2exons_human_1.3; frame=0, FT forward strand, quality=excellent; putative" FT repeat_region 15710498..15711088 FT /rpt_family="Alu" FT /note="repeat match = HSAL00432; putative" FT repeat_region 15710917..15711133 FT /rpt_family="Alu" FT /note="repeat match = HSAL00778; putative" FT repeat_region 15711516..15711623 FT /rpt_family="Alu" FT /note="repeat match = HSAL09402; putative" FT repeat_region 15711538..15711827 FT /rpt_family="Alu" FT /note="repeat match = HSAL06183; putative" FT repeat_region complement(15711943..15712023) FT /rpt_family="Alu" FT /note="repeat match = HSAL02579; putative" FT repeat_region complement(15711961..15712244) FT /rpt_family="Alu" FT /note="repeat match = HSAL02151; putative" FT repeat_region complement(15712391..15712675) FT /rpt_family="Alu" FT /note="repeat match = HSAL01910; putative" FT repeat_region complement(15712577..15712700) FT /rpt_family="Alu" FT /note="repeat match = HSAL10157; putative" FT repeat_region complement(15712835..15713710) FT /rpt_family="LINE" FT /note="repeat match = L1PA15; putative" FT misc_feature 15713026..15713056 FT /note="ss region (gap in bottom strand); putative" FT repeat_region complement(15713064..15714552) FT /rpt_family="LINE" FT /note="repeat match = L1000324; putative" FT repeat_region 15714579..15714877 FT /rpt_family="Alu" FT /note="repeat match = HSAL06264; putative" FT repeat_region complement(15714883..15714953) FT /rpt_family="LINE" FT /note="repeat match = L1000266; putative" FT repeat_region complement(15716153..15716243) FT /rpt_family="Alu" FT /note="repeat match = HSAL13023; putative" FT repeat_region complement(15716173..15716461) FT /rpt_family="Alu" FT /note="repeat match = ALU; putative" FT repeat_region complement(15717139..15717292) FT /rpt_family="Alu" FT /note="repeat match = HSAL04651; putative" FT repeat_region complement(15717170..15717459) FT /rpt_family="Alu" FT /note="repeat match = ALU; putative" FT repeat_region complement(15717960..15718264) FT /rpt_family="Alu" FT /note="repeat match = HSAL05084; putative" FT repeat_region complement(15718205..15718280) FT /rpt_family="Alu" FT /note="repeat match = HSAL12740; putative" FT repeat_region 15718439..15720021 FT /note="pTR5 repeat family; putative" FT repeat_region complement(15718446..15719372) FT /rpt_family="pTR5" FT /note="repeat match = PTR5; putative" FT misc_feature 15718609..15718733 FT /note="predicted exon, grail2exons_human_1.3; frame=0, FT forward strand, quality=excellent; putative" FT repeat_region complement(15719027..15720020) FT /rpt_family="pTR5" FT /note="repeat match = PTR5; putative" FT repeat_region 15720024..15720339 FT /rpt_family="Alu" FT /note="repeat match = HSAL02220; putative" FT repeat_region 15721136..15721416 FT /rpt_family="Alu" FT /note="repeat match = HSAL02480; putative" FT misc_feature 15721136..15721201 FT /note="similarity: sp|P39193; ALU; putative" FT repeat_region 15721218..15721455 FT /rpt_family="Alu" FT /note="repeat match = HSAL06455; putative" FT repeat_region 15722054..15722343 FT /rpt_family="Alu" FT /note="repeat match = ALU; putative" FT repeat_region 15722252..15722375 FT /rpt_family="Alu" FT /note="repeat match = HSAL03290; putative" FT misc_feature 15722467..15722934 FT /note="predicted exon, grail2exons_human_1.3; frame=1, FT forward strand, quality=excellent; putative" FT rRNA 15722474..15722955 FT /note="60S ribosomal RNA L23a; putative" FT misc_feature 15722475..15722933 FT /note="similarity: sp|P39024; ribsomomal (RL2B_Human); FT putative" FT repeat_region complement(15787533..15787662) FT /rpt_family="(TGAA)n" FT repeat_region complement(15787682..15787813) FT /rpt_family="(TGAG)n" FT repeat_region complement(15787826..15787953) FT /rpt_family="(TGAG)n" FT repeat_region complement(15787995..15788111) FT /rpt_family="(TGAG)n" FT repeat_region complement(15788137..15788284) FT /rpt_family="(TGAG)n" FT repeat_region complement(15788298..15788425) FT /rpt_family="(GGA)n" FT repeat_region complement(15788396..15788512) FT /rpt_family="(GGGA)n" FT repeat_region complement(15788522..15788574) FT /rpt_family="(TGAG)n" FT repeat_region complement(15788575..15788696) FT /rpt_family="(GGAA)n" FT repeat_region complement(15788701..15788755) FT /rpt_family="(TGAG)n" FT repeat_region complement(15788761..15788892) FT /rpt_family="(TGAG)n" FT repeat_region complement(15788926..15789041) FT /rpt_family="MLT2" FT CDS join(<15789071..15789215,15791054..15791107, FT 15791202..15791329,15793199..15793320,15794303..15794573, FT 15795626..15795692,15795878..15796007,15806746..15806879, FT 15806971..15807035,15807240..15807322,15807718..15807895) FT /codon_start=1 FT /product="F22329_1" FT /note="Hypothetical CYP4F2-like protein; DDS similarity to FT gi|408451 (U02388) Cytochrome P450 4F2 [Homo sapiens]. FT Score: 1600 Identity: 365/479 (76%).~~69% identical to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC11543.1" FT /translation="ITPTEEGLKNSTQMSATYSQGFTIWLGPIIPFIVLCHPDTIRSIT FT NASAAIAPKDNLFIRFLKPWLGEGILLSGGDKWSRHRRMLTPAFHFNILKSYITIFNKS FT ANIMLDKWQHLASEGSSCLDMFEHISLMTLDSLQKCIFSFDSHCQERPSEYIATILELS FT ALVEKRSQHILQHMDFLYYLSHDGRRFHRACRLVHDFTDAVIRERRRTLPTQGIDDFFK FT DKAKSKTLDFIDVLLLSKDEDGKALSDEDIRAEADTFMFGGHDTTASGLSWVLYNLARH FT PEYQERCRQEVQELLKDRDPKEIEWDDLAQLPFLTMCVKESLRLHPPAPFISRCCTQDI FT VLPDGRVIPKGITCLIDIIGVHHNPTVWPDPEVYDPFRFDPENSKGRSPLAFIPFSAGP FT RNCIGQAFAMAEMKVVLALMLLHFRFLPDHTEPRRKLELIMRAEGGLWLRVEPLNVSLQ FT " FT misc_feature 15791047..15791107 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 72.000~~DDS similarity to FT overlapping ESTs:~(5437..5494) AA277579 va77c04.r1 Soares FT mouse NML Mus musculus cDNA clone 737382 5' similar to FT SW:CP4F_RAT P33274 CYTOCHROME P450 IVF1 ; (116..173); 83% FT identity.~~(5449..5494) AA059667 mj77a08.r1 Soares mouse FT p3NMF19.5 Mus musculus cDNA clone 482102 5' similar to FT SW:CPF3_HUMAN Q08477 CYTOCHROME P450 IVF3 ; (136..181); 72% FT identity." FT misc_feature 15791202..15791329 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 99.000~~DDS similarity FT to overlapping ESTs:~AA277579 va77c04.r1 Soares mouse NML FT Mus musculus cDNA clone 737382 5' similar to SW:CP4F_RAT FT P33274 CYTOCHROME P450 IVF1 ; (174..301); 80% FT identity.~~AA059667 mj77a08.r1 Soares mouse p3NMF19.5 Mus FT musculus cDNA clone 482102 5' similar to SW:CPF3_HUMAN FT Q08477 CYTOCHROME P450 IVF3 ; (182..309); 77% identity." FT repeat_region 15791413..15791498 FT /rpt_family="MIR" FT repeat_region complement(15792709..15792905) FT /rpt_family="MIR" FT misc_feature 15793199..15793320 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~(7586..7694) FT DDS similarity to AA277579 va77c04.r1 Soares mouse NML Mus FT musculus cDNA clone 737382 5' similar to SW:CP4F_RAT P33274 FT CYTOCHROME P450 IVF1 ; (302..409); 81% FT identity.~~(7586..7701) AA059667 mj77a08.r1 Soares mouse FT p3NMF19.5 Mus musculus cDNA clone 482102 5' similar to FT SW:CPF3_HUMAN Q08477 CYTOCHROME P450 IVF3 ; (310..431); 85% FT identity." FT repeat_region complement(15793693..15793845) FT /rpt_family="AluSq" FT repeat_region 15793863..15793932 FT /rpt_family="(GA)n" FT repeat_region 15795089..15795127 FT /rpt_family="(GA)n" FT repeat_region complement(15795567..15795609) FT /rpt_family="(CA)n" FT misc_feature 15795626..15795692 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: FT 100.000~~(10060..10079) DDS similarity to AA316671 FT EST188348 HCC cell line (metastasis to liver in mouse) II FT Homo sapiens cDNA 5' end similar to similar to leukotriene FT B4 omega-hydroxylase; (19..37); 100% identity.~" FT misc_feature 15795878..15796007 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 97.000~~DDS similarity FT to AA316671 EST188348 HCC cell line (metastasis to liver in FT mouse) II Homo sapiens cDNA 5' end similar to similar to FT leukotriene B4 omega-hydroxylase; (38..167); 100% FT identity." FT repeat_region 15796991..15797109 FT /rpt_family="FLAM_A" FT repeat_region 15797216..15797377 FT /rpt_family="(GA)n" FT repeat_region complement(15797447..15797579) FT /rpt_family="LINE2" FT repeat_region 15797821..15798104 FT /rpt_family="AluY" FT repeat_region 15798256..15799147 FT /rpt_family="L1M1/2" FT repeat_region 15799169..15800915 FT /rpt_family="L1PB2" FT repeat_region complement(15801009..15801516) FT /rpt_family="L1MA7" FT repeat_region complement(15801664..15801728) FT /rpt_family="(TAGA)n" FT repeat_region complement(15801999..15802191) FT /rpt_family="L1MC/D" FT repeat_region complement(15802290..15802319) FT /rpt_family="AT_rich" FT repeat_region complement(15802767..15803028) FT /rpt_family="AluSx" FT repeat_region complement(15803166..15803257) FT /rpt_family="(TAAAA)n" FT repeat_region 15803603..15803909 FT /rpt_family="AluSq" FT repeat_region complement(15804269..15805533) FT /rpt_family="L1PA2" FT repeat_region 15805533..15806317 FT /rpt_family="L1PA2" FT repeat_region complement(15806339..15806401) FT /rpt_family="L1" FT misc_feature 15806746..15806879 FT /note="DDS similarity to AA316671 EST188348 HCC cell line FT (metastasis to liver in mouse) II Homo sapiens cDNA 5' end FT similar to similar to leukotriene B4 omega-hydroxylase; FT (168..301); 100% identity." FT misc_feature 15806971..15807035 FT /note="DDS similarity to overlapping ESTs:~(21358..21422) FT AA316671 EST188348 HCC cell line (metastasis to liver in FT mouse) II Homo sapiens cDNA 5' end similar to similar to FT leukotriene B4 omega-hydroxylase; (302..366); 100% FT identity.~~(21381..21422) AA494546 ne38g09.s1 NCI_CGAP_Co3 FT Homo sapiens cDNA clone IMAGE:899680 similar to gb:J02871 FT CYTOCHROME P450 IVB1 (HUMAN); (357..316); 100% FT identity.~~(21359..21687) 98080 ye56d02.r1 Homo sapiens FT cDNA clone 121731 5' similar to SP:CP4F_RAT P33274 FT CYTOCHROME P450 IVF1 ; (21..361); 95% identity." FT misc_feature 15807240..15807322 FT /note="DDS similarity to overlapping ESTs:~(21627..21709) FT AA316671 EST188348 HCC cell line (metastasis to liver in FT mouse) II Homo sapiens cDNA 5' end similar to similar to FT leukotriene B4 omega-hydroxylase; (367..452); 98% FT identity.~~(21628..21709) AA494546 ne38g09.s1 NCI_CGAP_Co3 FT Homo sapiens cDNA clone IMAGE:899680 similar to gb:J02871 FT CYTOCHROME P450 IVB1 (HUMAN); (315..234); 100% FT identity.~~(21707..21629) T98002 ye56d02.s1 Homo sapiens FT cDNA clone 121731 3' similar to SP:A46661 A46661 FT LEUKOTRIENE B4 OMEGA-HYDROXYLASE, P-450LTB OMEGA=CYTOCHROME FT P-450 SUPERFAMILY MEMBER - ; (250..331); 96% FT identity.~~(21662..21709) W88598 zh73b04.r1 Soares fetal FT liver spleen 1NFLS S1 Homo sapiens cDNA clone 417679 5' FT similar to SW:CPF3_HUMAN Q08477 CYTOCHROME P450 IVF3; FT (1..47); 96% identity." FT misc_feature 15807718..15807956 FT /note="DDS similarity to overlapping ESTs:~(22105..22339) FT AA494546 ne38g09.s1 NCI_CGAP_Co3 Homo sapiens cDNA clone FT IMAGE:899680 similar to gb:J02871 CYTOCHROME P450 IVB1 FT (HUMAN); (233..1); 99% identity.~~(22335..22102) T98002 FT ye56d02.s1 Homo sapiens cDNA clone 121731 3' similar to FT SP:A46661 A46661 LEUKOTRIENE B4 OMEGA-HYDROXYLASE, P-450LTB FT OMEGA=CYTOCHROME P-450 SUPERFAMILY MEMBER - ; (8..249); 97% FT identity.~~(22105..22340) W88598 zh73b04.r1 Soares fetal FT liver spleen 1NFLS S1 Homo sapiens cDNA clone 417679 5' FT similar to SW:CPF3_HUMAN Q08477 CYTOCHROME P450 IVF3; FT (48..283); 93% identity.~~(22340..22105) W89099 zh73b04.s1 FT Soares fetal liver spleen 1NFLS S1 Homo sapiens cDNA clone FT 417679 3' similar to gb:J02871 CYTOCHROME P450 IVB1 FT (HUMAN); (4..239); 97% identity.~~(22343..22105) R08175 FT yf18d02.s1 Homo sapiens cDNA clone 127203 3' similar to FT SP:CP4F_RAT P33274 CYTOCHROME P450 IVF1 ; (21..261); 92% FT identity.~~(22330..22105) R11209 yf41e08.s1 Homo sapiens FT cDNA clone 129446 3' similar to SP:A46661 A46661 FT LEUKOTRIENE B4 OMEGA-HYDROXYLASE, P-450LTB OMEGA=CYTOCHROME FT P-450 SUPERFAMILY MEMBER - ;contains Alu repetitive FT element: (1..229); 95% identity." FT repeat_region complement(15808134..15808191) FT /rpt_family="LINE2" FT repeat_region 15808709..15808925 FT /rpt_family="MIR" FT repeat_region complement(15809342..15809694) FT /rpt_family="L1" FT repeat_region complement(15809799..15809892) FT /rpt_family="L1M1/2" FT repeat_region complement(15809901..15809969) FT /rpt_family="L1M2" FT repeat_region 15809972..15810265 FT /rpt_family="L1" FT repeat_region complement(15810267..15810575) FT /rpt_family="MER1B" FT repeat_region complement(15810590..15810726) FT /rpt_family="L1" FT repeat_region 15810739..15810791 FT /rpt_family="(TA)n" FT repeat_region 15810820..15811111 FT /rpt_family="AluSq" FT repeat_region 15811140..15812257 FT /rpt_family="L1M2" FT repeat_region 15812277..15812563 FT /rpt_family="L1M1/2" FT repeat_region 15812702..15812809 FT /rpt_family="L1M1/2" FT repeat_region 15812993..15814037 FT /rpt_family="L1M1/2" FT misc_feature complement(15813476..15813556) FT /note="BLASTX similarity to 1894913 (1..27); match: 0.7, FT score: 1.8e-06; database searched: nr; (U67319) Lice2 beta FT cysteine protease [Homo sapiens]" FT repeat_region complement(15814060..15814340) FT /rpt_family="AluSg" FT repeat_region 15814344..15815186 FT /rpt_family="L1M1/2" FT repeat_region 15815224..15816262 FT /rpt_family="L1M1/2" FT repeat_region complement(15816398..15816470) FT /rpt_family="(TAAA)n" FT repeat_region complement(15816476..15818180) FT /rpt_family="L1PA2" FT repeat_region 15818180..15819406 FT /rpt_family="L1PA2" FT repeat_region 15819407..15820076 FT /rpt_family="L1M1" FT repeat_region 15820077..15820300 FT /rpt_family="AluY" FT repeat_region 15820301..15822424 FT /rpt_family="L1M1" FT repeat_region complement(15822425..15822474) FT /rpt_family="MLT2A" FT repeat_region complement(15822500..15822951) FT /rpt_family="MLT2A" FT repeat_region 15822952..15823449 FT /rpt_family="L1M1" FT repeat_region complement(15823456..15823788) FT /rpt_family="L1" FT repeat_region complement(15824149..15824188) FT /rpt_family="MSTA" FT repeat_region complement(15824191..15824944) FT /rpt_family="L1P1" FT repeat_region 15824942..15825227 FT /rpt_family="L1HS" FT repeat_region 15825234..15825357 FT /rpt_family="POLY_A" FT repeat_region 15825360..15825490 FT /rpt_family="FLAM_C" FT repeat_region complement(15825512..15825869) FT /rpt_family="MSTA" FT repeat_region 15826872..15826908 FT /rpt_family="(TGG)n" FT repeat_region complement(15826985..15827011) FT /rpt_family="AT_rich" FT repeat_region complement(15851385..15851567) FT /rpt_family="L1MC4" FT repeat_region 15851701..15851798 FT /rpt_family="(TAAA)n" FT repeat_region complement(15851990..15852086) FT /rpt_family="MIR" FT misc_feature 15852192..15852574 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 86.000" FT misc_feature 15852203..15852304 FT /note="BLASTX similarity to 2996652 (1..34); match: 0.41, FT score: 5.0e-152; database searched: nr; (AC004510) R30385_1 FT [Homo sapiens]" FT CDS 15852203..15853153 FT /codon_start=1 FT /product="F20722_2" FT /note="Hypothetical odorant receptor gene; Most similar to FT hypothetical odorant receptor (AC004510) R30385_1 [Homo FT sapiens] ( 65% identity) and (X92969) odorant receptor [Mus FT musculus] ( 39% identity)" FT /protein_id="AAC14389.1" FT /translation="MPGQNYRTISEFILSGFSAFPQQLLPVLFLLYLLMFLFTLLGNLL FT IMATVWIERRLHTPMYLFLCALSISEILFTVAITPRMLADLLFTHRSITFVACAIQMFF FT SFMFGFTHSFLLMVMGYDHYVTICHPLHYNMLMSPRGCAHLVAWTWAGGSVMGMMVTMM FT VFHLTFCGSNVIHHFLCHVLSLLKLACGSKTSSVIMGVMLVCVTALIGCLFLIILSFVF FT IVAAILRIPSAEGRHKTFSTCVSHLTVVVMHYSFASLIYLKPKGLHSMYSDALMATTYT FT VFTPFLSPIIFSLRNKELKNAINKNFCRRFCPLSS" FT misc_feature 15852203..15852313 FT /note="BLASTX similarity to PID (1..37); match: 0.24, FT score: 4.1e-83; database searched: nr; (X92969) odorant FT receptor [Mus musculus]" FT misc_feature 15852281..15853141 FT /note="BLASTX similarity to 2996652 (26..312); match: 0.73, FT score: 5.0e-152; database searched: nr; (AC004510) R30385_1 FT [Homo sapiens]" FT misc_feature 15852284..15852736 FT /note="BLASTX similarity to PID (27..177); match: 0.44, FT score: 4.1e-83; database searched: nr; (X92969) odorant FT receptor [Mus musculus]" FT misc_feature 15852722..15852799 FT /note="BLASTX similarity to PID (172..197); match: 0.34, FT score: 4.1e-83; database searched: nr; (X92969) odorant FT receptor [Mus musculus]" FT misc_feature 15852797..15853153 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 67.000" FT misc_feature 15852845..15853111 FT /note="BLASTX similarity to PID (212..300); match: 0.55, FT score: 4.1e-83; database searched: nr; (X92969) odorant FT receptor [Mus musculus]" FT repeat_region 15853191..15853257 FT /rpt_family="MIR" FT repeat_region complement(15853637..15853929) FT /rpt_family="AluSc" FT repeat_region 15854043..15854122 FT /rpt_family="(GA)n" FT repeat_region complement(15854913..15855011) FT /rpt_family="L1M4" FT repeat_region 15855029..15855298 FT /rpt_family="AluY" FT repeat_region complement(15855760..15856253) FT /rpt_family="L1M4" FT repeat_region complement(15856241..15856463) FT /rpt_family="L1PA10" FT repeat_region complement(15856454..15856833) FT /rpt_family="L1M4" FT repeat_region complement(15856834..15856923) FT /rpt_family="(GGA)n" FT repeat_region complement(15856924..15857221) FT /rpt_family="AluJo" FT repeat_region complement(15857251..15857753) FT /rpt_family="L1M4" FT repeat_region complement(15857747..15858058) FT /rpt_family="L1" FT repeat_region complement(15858057..15858176) FT /rpt_family="L1PA8" FT repeat_region 15858176..15858257 FT /rpt_family="L1PA8" FT repeat_region 15858387..15858797 FT /rpt_family="L1PA16" FT misc_feature complement(15858693..15858779) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 85.000" FT repeat_region complement(15858804..15859326) FT /rpt_family="L1M4" FT repeat_region 15859746..15859869 FT /rpt_family="FLAM_C" FT misc_feature complement(15860241..15860371) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 54.000" FT misc_feature complement(15860649..15860713) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 64.000" FT repeat_region complement(15861199..15861483) FT /rpt_family="L1PA8" FT repeat_region 15861595..15862728 FT /rpt_family="L1" FT repeat_region complement(15862747..15863576) FT /rpt_family="L1MA4" FT repeat_region complement(15863586..15865582) FT /rpt_family="L1PB3" FT misc_feature complement(15865184..15865245) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 67.000" FT repeat_region complement(15865599..15865882) FT /rpt_family="AluSx" FT repeat_region complement(15865884..15869032) FT /rpt_family="L1PB3" FT misc_feature complement(15867107..15867259) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 54.000" FT repeat_region complement(15869089..15869461) FT /rpt_family="L1PB3" FT repeat_region complement(15869463..15869747) FT /rpt_family="L1" FT repeat_region 15869744..15869780 FT /rpt_family="L1" FT repeat_region complement(15870195..15870410) FT /rpt_family="MIR" FT misc_feature complement(15871068..15871230) FT /pseudo FT /standard_name="exon" FT /note="DPS similarity to sp|Q08477|CPF3_HUMAN CYTOCHROME FT P450 IVF3 (LEUKOTRIENE-B4 OMEGA-HYDROXYLASE) FT (LEUKOTRIENE-B4 20-MONOOXYGENASE) (CYTOCHROME FT P450-LTB-OMEGA) gi|422975|pir||A46661 leukotriene B4 FT omega-hydroxylase, P-450LTB omega=cytochrome P-450 FT superfamily member - human gi|391716 (D12620) cytochrome FT P-450LTBV [Homo sapiens]; (residues 467..520); 67% identity FT (overall).~(35366..35193) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 100.000" FT misc_feature complement(15871625..15871707) FT /pseudo FT /standard_name="exon" FT /note="DPS similarity to sp|Q08477|CPF3_HUMAN CYTOCHROME FT P450 IVF3 (LEUKOTRIENE-B4 OMEGA-HYDROXYLASE) FT (LEUKOTRIENE-B4 20-MONOOXYGENASE) (CYTOCHROME FT P450-LTB-OMEGA) gi|422975|pir||A46661 leukotriene B4 FT omega-hydroxylase, P-450LTB omega=cytochrome P-450 FT superfamily member - human gi|391716 (D12620) cytochrome FT P-450LTBV [Homo sapiens]; (residues 439..466); 67% identity FT (overall).~predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(15871895..15871959) FT /pseudo FT /standard_name="exon" FT /note="DPS similarity to sp|Q08477|CPF3_HUMAN CYTOCHROME FT P450 IVF3 (LEUKOTRIENE-B4 OMEGA-HYDROXYLASE) FT (LEUKOTRIENE-B4 20-MONOOXYGENASE) (CYTOCHROME FT P450-LTB-OMEGA) gi|422975|pir||A46661 leukotriene B4 FT omega-hydroxylase, P-450LTB omega=cytochrome P-450 FT superfamily member - human gi|391716 (D12620) cytochrome FT P-450LTBV [Homo sapiens]; (residues 418..438); 67% identity FT (overall)." FT misc_feature complement(15872052..15872185) FT /pseudo FT /standard_name="exon" FT /note="DPS similarity to sp|Q08477|CPF3_HUMAN CYTOCHROME FT P450 IVF3 (LEUKOTRIENE-B4 OMEGA-HYDROXYLASE) FT (LEUKOTRIENE-B4 20-MONOOXYGENASE) (CYTOCHROME FT P450-LTB-OMEGA) gi|422975|pir||A46661 leukotriene B4 FT omega-hydroxylase, P-450LTB omega=cytochrome P-450 FT superfamily member - human gi|391716 (D12620) cytochrome FT P-450LTBV [Homo sapiens]; (residues 373..417); 67% identity FT (overall). " FT repeat_region 15872528..15872717 FT /rpt_family="L1" FT repeat_region complement(15872894..15872923) FT /rpt_family="AT_rich" FT repeat_region complement(15872959..15873265) FT /rpt_family="AluSx" FT repeat_region complement(15873396..15873416) FT /rpt_family="AT_rich" FT repeat_region 15873779..15873893 FT /rpt_family="L1" FT repeat_region 15874160..15874235 FT /rpt_family="POLY_A" FT repeat_region 15874450..15874658 FT /rpt_family="L1ME3A" FT repeat_region 15874894..15874974 FT /rpt_family="(TAGA)n" FT repeat_region 15875144..15875650 FT /rpt_family="L1MA6" FT repeat_region 15875708..15876008 FT /rpt_family="AluSg" FT repeat_region complement(15876066..15877820) FT /rpt_family="L1PB2" FT misc_feature 15876079..15876135 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 51.000" FT repeat_region complement(15877826..15878719) FT /rpt_family="L1M1/2" FT misc_feature 15889005..15890165 FT /note="NOTE: Transposon libraries failed to resolve the FT number of repeat copies 17740-18900." FT repeat_region complement(15929176..15929499) FT /rpt_family="L1M1" FT repeat_region complement(15929722..15929757) FT /rpt_family="LINE2" FT repeat_region 15929853..15930146 FT /rpt_family="AluSg" FT repeat_region 15930497..15930604 FT /rpt_family="AluJb" FT repeat_region complement(15930605..15930634) FT /rpt_family="AT_rich" FT repeat_region complement(15931042..15931158) FT /rpt_family="MER63C" FT repeat_region complement(15931166..15931668) FT /rpt_family="MER1A" FT repeat_region 15932301..15932569 FT /rpt_family="AluSx" FT repeat_region 15932579..15932604 FT /rpt_family="(CA)n" FT misc_feature complement(15932619..15932750) FT /note="BLASTX similarity to P52737 (190..233); match: 0.61, FT score: 8.3e-49; database searched: nr; ZINC FINGER PROTEIN FT 136 pir||B57785 zinc finger protein ZNF136 - human FT >gi|487785 (U09367) zinc finger protein ZNF136 [Homo" FT misc_feature complement(15932761..15933036) FT /note="BLASTX similarity to P52737 (94..185); match: 0.48, FT score: 4.7e-51; database searched: nr; ZINC FINGER PROTEIN FT 136 pir||B57785 zinc finger protein ZNF136 - human FT >gi|487785 (U09367) zinc finger protein ZNF136 [Homo" FT CDS complement(join(15932803..15933092,15934570..15934597)) FT /codon_start=1 FT /product="R30385_2" FT /note="Hypothetical ZNF-like protein; DPS similarity to FT (U56862) pancreas only zinc finger protein [Rattus FT norvegicus]; (D45210) zinc finger protein [Mus musculus]" FT /protein_id="AAC08455.1" FT /translation="MWLSTSPYRKGSQCGEAFSQIPGHNLNKKTPPGVKPPESHVCGEV FT GVGYPSTERHIRDRLGRKPCEYQECRQKAYTCKPCGNAFRFHHSFHIHERPHSGENLYE FT C" FT repeat_region complement(15933145..15933175) FT /rpt_family="AT_rich" FT repeat_region complement(15933206..15933456) FT /rpt_family="AluSq" FT repeat_region complement(15933598..15933902) FT /rpt_family="AluJo" FT repeat_region complement(15934165..15934206) FT /rpt_family="AT_rich" FT repeat_region complement(15934244..15934369) FT /rpt_family="AluSc" FT misc_feature complement(15934494..15934614) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 72.000" FT misc_feature complement(15934500..15934607) FT /note="BLASTX similarity to P16415 (39..74); match: 0.77, FT score: 8.7e-10; database searched: nr; ZINC FINGER PROTEIN FT ZFP-36 pir||S08686 finger protein ZFP-36 - human (fragment) FT >gi|930123 (X51760) zinc finger protein" FT repeat_region complement(15934937..15935069) FT /rpt_family="MER68A" FT repeat_region 15935076..15935635 FT /rpt_family="L1M4" FT misc_feature complement(15935702..15935734) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 58.000" FT repeat_region 15935782..15936081 FT /rpt_family="AluY" FT repeat_region 15936085..15936365 FT /rpt_family="L1" FT repeat_region 15936351..15936749 FT /rpt_family="L1" FT repeat_region 15936750..15936829 FT /rpt_family="MER57_internal" FT repeat_region complement(15937078..15937104) FT /rpt_family="AT_rich" FT repeat_region complement(15937223..15937246) FT /rpt_family="(TGG)n" FT repeat_region complement(15937328..15937633) FT /rpt_family="AluSx" FT repeat_region 15938308..15938591 FT /rpt_family="AluSx" FT repeat_region 15938748..15938874 FT /rpt_family="FLAM_C" FT repeat_region 15939548..15940008 FT /rpt_family="LTR7" FT repeat_region 15940012..15941174 FT /rpt_family="HERVH" FT repeat_region 15941519..15944038 FT /rpt_family="HERVH" FT repeat_region 15944104..15945535 FT /rpt_family="HERVH" FT misc_feature 15945663..15946367 FT /note="DPS similarity to (U60315) MC132L [Molluscum FT contagiosum virus subtype 1]; Score: 397 Identity: 97/229 FT (42%)." FT repeat_region 15946501..15946978 FT /rpt_family="LTR7" FT repeat_region 15948094..15948158 FT /rpt_family="LTR10C" FT repeat_region complement(15948159..15948742) FT /rpt_family="LTR10C" FT repeat_region 15948743..15949265 FT /rpt_family="LTR10C" FT repeat_region complement(15949400..15949679) FT /rpt_family="MER4A" FT repeat_region complement(15949680..15949811) FT /rpt_family="MER4A2" FT repeat_region complement(15950336..15950455) FT /rpt_family="MER41B" FT repeat_region 15950457..15950759 FT /rpt_family="AluSx" FT repeat_region complement(15950760..15951199) FT /rpt_family="MER41A" FT repeat_region complement(15951250..15951367) FT /rpt_family="MER41A" FT repeat_region 15951369..15951667 FT /rpt_family="AluSc" FT repeat_region complement(15951668..15952006) FT /rpt_family="MER41B" FT repeat_region complement(15952011..15952311) FT /rpt_family="AluSx" FT repeat_region complement(15952381..15952404) FT /rpt_family="(GAAA)n" FT repeat_region complement(15952405..15952706) FT /rpt_family="AluSx" FT repeat_region 15952863..15952922 FT /rpt_family="MIR" FT repeat_region complement(15953050..15953100) FT /rpt_family="LINE2" FT repeat_region 15953505..15953801 FT /rpt_family="AluSx" FT repeat_region complement(15953815..15953854) FT /rpt_family="L1" FT repeat_region complement(15953922..15954199) FT /rpt_family="L1MA8" FT repeat_region 15954197..15954259 FT /rpt_family="L1M4" FT repeat_region 15954243..15954745 FT /rpt_family="L1" FT repeat_region 15954746..15954870 FT /rpt_family="AluJb" FT repeat_region complement(15954873..15955174) FT /rpt_family="AluSq" FT repeat_region 15955177..15955200 FT /rpt_family="AT_rich" FT repeat_region 15955216..15955275 FT /rpt_family="AluJ/FLAM" FT repeat_region 15955216..15955339 FT /rpt_family="AluJb" FT repeat_region complement(15955616..15955698) FT /rpt_family="LINE2" FT repeat_region 15955969..15956267 FT /rpt_family="AluSx" FT repeat_region 15956316..15956454 FT /rpt_family="(GAA)n" FT repeat_region 15956465..15956755 FT /rpt_family="AluSx" FT repeat_region complement(15957080..15957216) FT /rpt_family="LINE2" FT repeat_region complement(15957448..15957748) FT /rpt_family="AluSq" FT misc_feature complement(15958075..15958191) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 68.000" FT repeat_region complement(15958334..15958635) FT /rpt_family="AluSx" FT repeat_region 15958786..15958904 FT /rpt_family="MIR" FT repeat_region complement(15959429..15959702) FT /rpt_family="AluSq" FT repeat_region complement(15959717..15959876) FT /rpt_family="MLT1A2" FT misc_feature 15959991..15960086 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 88.000" FT repeat_region complement(15960112..15960436) FT /rpt_family="AluJb" FT repeat_region complement(15960790..15961086) FT /rpt_family="AluSq" FT repeat_region complement(15961102..15961261) FT /rpt_family="THE1B" FT repeat_region 15961430..15961806 FT /rpt_family="MER4B" FT repeat_region complement(15961809..15962105) FT /rpt_family="AluSx" FT repeat_region 15962106..15962402 FT /rpt_family="MER4B" FT repeat_region 15963393..15963498 FT /rpt_family="MIR" FT repeat_region 15963705..15964158 FT /rpt_family="MLT1C" FT repeat_region 15964258..15964899 FT /rpt_family="L1PA14" FT repeat_region 15964914..15964985 FT /rpt_family="TIGGER1" FT repeat_region 15965093..15965396 FT /rpt_family="AluSq" FT repeat_region 15965831..15965867 FT /rpt_family="MADE1" FT repeat_region 15965874..15965907 FT /rpt_family="L1PB1" FT repeat_region 15965908..15966209 FT /rpt_family="AluSp" FT repeat_region 15966211..15966421 FT /rpt_family="L1PB1" FT repeat_region 15966423..15966527 FT /rpt_family="(TA)n" FT repeat_region 15966547..15966687 FT /rpt_family="(TA)n" FT repeat_region 15966693..15967006 FT /rpt_family="L1PB1" FT repeat_region complement(15967013..15967087) FT /rpt_family="AluS" FT repeat_region complement(15967088..15967121) FT /rpt_family="L1P5" FT repeat_region complement(15967128..15967164) FT /rpt_family="MADE1" FT repeat_region 15967317..15967348 FT /rpt_family="L1PB1" FT repeat_region complement(15967353..15967385) FT /rpt_family="MADE1" FT repeat_region 15967483..15967786 FT /rpt_family="AluY" FT repeat_region 15967787..15967823 FT /rpt_family="(TA)n" FT repeat_region 15968102..15968395 FT /rpt_family="AluSx" FT repeat_region 15969075..15969371 FT /rpt_family="AluSx" FT repeat_region 15969420..15969718 FT /rpt_family="AluSq" FT repeat_region 15969760..15970069 FT /rpt_family="AluY" FT repeat_region 15970082..15970297 FT /rpt_family="MER20" FT repeat_region complement(15970450..15970693) FT /rpt_family="MER82" FT repeat_region complement(15970700..15970938) FT /rpt_family="AluSg" FT repeat_region complement(15970939..15971145) FT /rpt_family="MER82" FT repeat_region 15971146..15971415 FT /rpt_family="AluSx" FT repeat_region complement(15971417..15971595) FT /rpt_family="MER82" FT repeat_region 15971640..15971928 FT /rpt_family="L1MA9" FT repeat_region complement(15971936..15971978) FT /rpt_family="(GAAA)n" FT repeat_region complement(15971979..15972280) FT /rpt_family="AluSq" FT repeat_region 15972282..15972358 FT /rpt_family="L1MA9" FT repeat_region complement(15972425..15972729) FT /rpt_family="AluSx" FT repeat_region 15972730..15972805 FT /rpt_family="L1MA6" FT repeat_region complement(15972812..15972845) FT /rpt_family="AT_rich" FT repeat_region 15973133..15973216 FT /rpt_family="AluJ/FLAM" FT repeat_region 15973221..15973340 FT /rpt_family="(GGGA)n" FT repeat_region complement(15973368..15973496) FT /rpt_family="MIR" FT repeat_region complement(15974101..15974206) FT /rpt_family="MIR" FT repeat_region complement(15974610..15974633) FT /rpt_family="AT_rich" FT repeat_region complement(15974641..15974938) FT /rpt_family="AluY" FT repeat_region complement(15975269..15975570) FT /rpt_family="AluSg" FT repeat_region 15976203..15977002 FT /rpt_family="L1PA13" FT repeat_region 15977015..15977311 FT /rpt_family="AluSx" FT repeat_region complement(15977313..15977714) FT /rpt_family="L1P1" FT repeat_region 15977715..15977944 FT /rpt_family="L1" FT repeat_region 15978034..15978107 FT /rpt_family="MLT1E" FT repeat_region complement(15978129..15978422) FT /rpt_family="AluSx" FT repeat_region complement(15978424..15978486) FT /rpt_family="7SLRNA" FT repeat_region 15978824..15979118 FT /rpt_family="AluSx" FT repeat_region 15979127..15979317 FT /rpt_family="(GAAA)n" FT repeat_region 15979298..15979413 FT /rpt_family="(GAAAA)n" FT repeat_region 15979414..15979489 FT /rpt_family="AluSc" FT repeat_region complement(15979495..15979792) FT /rpt_family="AluSx" FT repeat_region 15979820..15979860 FT /rpt_family="L1M4" FT repeat_region complement(15980438..15980772) FT /rpt_family="LINE2" FT repeat_region 15980973..15981273 FT /rpt_family="AluSg" FT repeat_region 15981300..15981597 FT /rpt_family="AluSx" FT repeat_region complement(15981767..15981897) FT /rpt_family="MIR" FT misc_feature complement(15982481..15982664) FT /note="DPS similarity to P51869|CPF4_RAT CYTOCHROME P450 FT IVF4 gi|1146436 (U39206) cytochrome P450 4F4 [Rattus FT norvegicus]; Score: 136 Identity: 39/62 (62%)." FT misc_feature complement(15982508..15982693) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 88.000" FT repeat_region 15983081..15983369 FT /rpt_family="AluSc" FT repeat_region complement(15983373..15983432) FT /rpt_family="(TAAAA)n" FT repeat_region complement(15983433..15983730) FT /rpt_family="AluSx" FT repeat_region 15983756..15983889 FT /rpt_family="L1M4" FT repeat_region 15984053..15984348 FT /rpt_family="AluSx" FT repeat_region 15984352..15984399 FT /rpt_family="(CAAA)n" FT repeat_region 15984540..15984634 FT /rpt_family="AluSx" FT repeat_region 15984635..15985096 FT /rpt_family="LTR10A" FT repeat_region 15985108..15985347 FT /rpt_family="AluSx" FT repeat_region 15985348..15985673 FT /rpt_family="L1M" FT repeat_region 15985681..15986236 FT /rpt_family="LTR9" FT repeat_region complement(15986238..15986538) FT /rpt_family="AluSp" FT repeat_region 15986539..15986643 FT /rpt_family="LTR9" FT repeat_region 15986644..15987089 FT /rpt_family="L1MD2" FT repeat_region 15987163..15987438 FT /rpt_family="AluSx" FT repeat_region 15987759..15988053 FT /rpt_family="AluSx" FT repeat_region 15988090..15988192 FT /rpt_family="AluJo/FRAM" FT repeat_region 15988195..15988243 FT /rpt_family="(CAAAA)n" FT repeat_region 15988361..15988445 FT /rpt_family="MIR" FT misc_feature 15988764..15988936 FT /note="DDS similarity to AA377259 EST89796 Small intestine FT II Homo sapiens cDNA 3' end similar to cytochrome P450, FT subfamily IVF, polypeptide 2; Score: 334 Identity: 170/173 FT (98%)." FT misc_feature complement(15988834..15988941) FT /note="BLASTN similarity to U02388 (2261..2368); match: 1, FT score: 2.2e-34; database searched: nt; Human cytochrome FT P450 4F2 (CYP4F2) mRNA, complete cds." FT repeat_region complement(15988937..15989277) FT /rpt_family="L1MB5" FT mRNA complement(15988834..16008882) FT /product="Human cytochrome P450 4F2 (CYP4F2) mRNA" FT repeat_region complement(15988937..15989537) FT /rpt_family="L1MB5" FT CDS complement(join(15989581..15989746,15990156..15990238, FT 15990414..15990478,15990574..15990707,15996734..15996863, FT 15997052..15997118,16000233..16000503,16001122..16001243, FT 16003119..16003246,16003339..16003392,16006316..16006460, FT 16008224..16008421)) FT /codon_start=1 FT /gene="CYP4F2" FT /product="CYP4F2" FT /note="cytochrome P450 4F2; leukotriene B4 FT omega-hydroxylase; LEUKOTRIENE-B4 20-MONOOXYGENASE; FT YTOCHROME P450-LTB-OMEGA; LEUKOTRIENE-B4 OMEGA-HYDROXYLASE" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC27730.1" FT /translation="MSQLSLSWLGLWPVAASPWLLLLLVGASWLLAHVLAWTYAFYDNC FT RRLRCFPQPPRRNWFWGHQGMVNPTEEGMRVLTQLVATYPQGFKVWMGPISPLLSLCHP FT DIIRSVINASAAIAPKDKFFYSFLEPWLGDGLLLSAGDKWSRHRRMLTPAFHFNILKPY FT MKIFNESVNIMHAKWQLLASEGSACLDMFEHISLMTLDSLQKCVFSFDSHCQEKPSEYI FT AAILELSALVSKRHHEILLHIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRRTLPSQ FT GVDDFLQAKAKSKTLDFIDVLLLSKDEDGKKLSDEDIRAEADTFMFEGHDTTASGLSWV FT LYHLAKHPEYQERCRQEVQELLKDREPKEIEWDDLAHLPFLTMCMKESLRLHPPVPVIS FT RHVTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEVYDPFRFDPENIKERSPLAF FT IPFSAGPRNCIGQTFAMAEMKVVLALTLLRFRVLPDHTEPRRKPELVLRAEGGLWLRVE FT PLS" FT repeat_region 15991157..15991445 FT /rpt_family="AluY" FT repeat_region 15991723..15991956 FT /rpt_family="L1MD2" FT repeat_region 15991968..15992046 FT /rpt_family="L1MA7" FT repeat_region 15992174..15992285 FT /rpt_family="(TAGA)n" FT repeat_region 15992286..15992415 FT /rpt_family="(TAGA)n" FT repeat_region 15992574..15992772 FT /rpt_family="L1MA7" FT repeat_region 15992773..15993074 FT /rpt_family="AluSg" FT repeat_region 15993089..15993392 FT /rpt_family="L1MA7" FT repeat_region 15993392..15993536 FT /rpt_family="L1MA7" FT repeat_region 15993857..15994587 FT /rpt_family="L1MA4" FT repeat_region 15994589..15994888 FT /rpt_family="AluSg" FT repeat_region 15994891..15994924 FT /rpt_family="(GA)n" FT repeat_region 15994933..15995440 FT /rpt_family="L1MA4" FT repeat_region 15995638..15995903 FT /rpt_family="LINE2" FT repeat_region complement(15995904..15995966) FT /rpt_family="(GA)n" FT repeat_region complement(15997616..15997666) FT /rpt_family="(GA)n" FT repeat_region 15997952..15998074 FT /rpt_family="(CA)n" FT repeat_region 15998128..15998252 FT /rpt_family="(CA)n" FT repeat_region 15998559..15998678 FT /rpt_family="(CA)n" FT repeat_region 15998750..15998866 FT /rpt_family="(CA)n" FT repeat_region 15998967..15999086 FT /rpt_family="(CAAA)n" FT repeat_region 15999124..15999242 FT /rpt_family="(CA)n" FT repeat_region 15999244..15999318 FT /rpt_family="(CA)n" FT repeat_region 15999320..15999490 FT /rpt_family="(CA)n" FT repeat_region 15999493..15999609 FT /rpt_family="(CA)n" FT repeat_region 16001542..16001801 FT /rpt_family="MIR" FT repeat_region complement(16002964..16003036) FT /rpt_family="MIR" FT repeat_region complement(16004926..16004997) FT /rpt_family="MIR" FT repeat_region 16006490..16006572 FT /rpt_family="MLT2D" FT repeat_region complement(16006585..16006722) FT /rpt_family="(TAGA)n" FT repeat_region complement(16006767..16006953) FT /rpt_family="(TGGA)n" FT repeat_region complement(16006946..16007086) FT /rpt_family="(TAGA)n" FT repeat_region 16009052..16009250 FT /rpt_family="(TAGA)n" FT repeat_region 16009252..16009311 FT /rpt_family="(TAGA)n" FT repeat_region 16009483..16009524 FT /rpt_family="POLY_A" FT repeat_region complement(16009604..16009640) FT /rpt_family="(TGG)n" FT misc_feature complement(16009611..16009704) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 82.000" FT misc_feature complement(16009948..16010070) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 80.000" FT repeat_region 16009956..16010080 FT /rpt_family="pTR5" FT repeat_region complement(16010082..16010124) FT /rpt_family="(GAAAA)n" FT repeat_region complement(16010129..16010335) FT /rpt_family="L1PA2" FT repeat_region 16010335..16010426 FT /rpt_family="L1PA2" FT misc_feature complement(16010418..16010910) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 57.000" FT repeat_region 16010445..16011122 FT /rpt_family="pTR5" FT repeat_region 16011123..16011198 FT /rpt_family="MER51A" FT repeat_region 16011199..16011430 FT /rpt_family="pTR5" FT misc_feature 16011429..16011641 FT /note="BLASTN similarity to AQ036765 (315..527); match: FT 0.98, score: 6.1e-79; database searched: month.na; FT CIT-HSP-2331C14.TF CIT-HSP Homo sapiens genomic clone FT 2331C14" FT repeat_region 16012112..16012483 FT /rpt_family="MSTA" FT repeat_region complement(16012502..16012588) FT /rpt_family="AluJ/FLAM" FT repeat_region 16012589..16012627 FT /rpt_family="MSTA" FT misc_feature complement(16013136..16014049) FT /note="Mitochondrial RNA polymerase pseudogene, partial FT CDS: FT CNGLQHYAALGRDSVGAASVNLEPSDVPQDVYSGVAAQVEVFRRQDAQRGMRVAQVLE FT AFITRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELNDFPQEFVWEASHYLVRQVFRSL FT QEMFSGTRAIQHWLIESAHLVSHTGSVVEWVTPLGVPIIQPYRLESKVKQSGGGIQSI FT TYTHNRDISRKPNTPKQKNGFRPNFIHSLDSSHMMLTTLHCYRKGLTFVSVHDCYRTH FT AADVSIMNQVCREQFACTASPSCRTCPGSWSGGSALSPRRSWRPAR" FT repeat_region 16014050..16014318 FT /rpt_family="L1" FT repeat_region complement(16014326..16014803) FT /rpt_family="L1M2" FT repeat_region 16014804..16015254 FT /rpt_family="MLT2A" FT repeat_region 16015280..16015329 FT /rpt_family="MLT2A" FT repeat_region 16015351..16015404 FT /rpt_family="MLT2A" FT repeat_region complement(16015405..16018384) FT /rpt_family="L1M2" FT repeat_region complement(16020175..16020207) FT /rpt_family="AT_rich" FT repeat_region 16021080..16021373 FT /rpt_family="AluY" FT repeat_region 16022865..16022927 FT /rpt_family="(CAG)n" FT repeat_region 16022983..16023235 FT /rpt_family="L1" FT repeat_region complement(16023491..16023627) FT /rpt_family="(CA)n" FT repeat_region complement(16023781..16023999) FT /rpt_family="MIR" FT misc_feature complement(16024094..16024261) FT /note="DDS similarity to AA335970 EST40465 Epididymus Homo FT sapiens cDNA 5' end; Score: 332 Identity: 167/168 (99%)." FT CDS complement(join(16024542..16024719,16025114..16025197, FT 16025428..>16025448)) FT /codon_start=2 FT /product="F20191_1, partial CDS" FT /note="CYP 4F2-like protein" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC27731.1" FT /translation="IHYNPTVSTTPSVSTKRTSRRGHLWLLFPSRQGPGNCIGQAFAMA FT EMKVVLALTLLHFRILPTHTEPRRKPELILRAEGGLWLRVEPLGANSQ" FT misc_feature complement(16024559..16024719) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 99.000~DDS similarity FT to overlapping ESTs: AA991369 os51g09.s1 NCI_CGAP_Br2 Homo FT sapiens cDNA clone IMAGE:1608928 3' similar to gb:J02871 FT CYTOCHROME P450 IVB1 (HUMAN); (240..1); 99% FT identity.~T69576 yc44c03.s1 Homo sapiens cDNA clone 83524 FT 3' similar to gb:J02871 CYTOCHROME P450 IVB1 (HUMAN); FT (234..1); 94% identity.~Additional EST matches: T56269" FT misc_feature complement(16025115..16025197) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~DDS similarity FT to overlapping ESTs: AA991369 os51g09.s1 NCI_CGAP_Br2 Homo FT sapiens cDNA clone IMAGE:1608928 3' similar to gb:J02871 FT CYTOCHROME P450 IVB1 (HUMAN); (323..241); 100% FT identity.~T69576 yc44c03.s1 Homo sapiens cDNA clone 83524 FT 3' similar to gb:J02871 CYTOCHROME P450 IVB1 (HUMAN); FT (316..235); 95% identity.~Additional EST matches: T56269" FT misc_feature complement(16025412..16025448) FT /note="DDS similarity to AA991369 os51g09.s1 NCI_CGAP_Br2 FT Homo sapiens cDNA clone IMAGE:1608928 3' similar to FT gb:J02871 CYTOCHROME P450 IVB1 (HUMAN); (358..324); 98% FT identity. " FT misc_feature 16042336..16044893 FT /note="NOTE: Transposon sequencing failed to verify the FT number of repeat copies 3019-5576. Unsure number of repeat FT copies 3019-5576." FT repeat_region 16077342..16077639 FT /rpt_family="AluSq" FT misc_feature 16077831..16078016 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 60.000" FT repeat_region 16078016..16078099 FT /rpt_family="(GGAA)n" FT repeat_region 16078117..16078611 FT /rpt_family="L1MC2" FT repeat_region 16078613..16078909 FT /rpt_family="AluSq" FT repeat_region 16078915..16079340 FT /rpt_family="L1MC2" FT repeat_region 16079358..16080622 FT /rpt_family="L1PA2" FT repeat_region 16080648..16081038 FT /rpt_family="L1MC2" FT repeat_region 16081039..16081326 FT /rpt_family="AluJb" FT repeat_region 16081359..16081554 FT /rpt_family="L1MC2" FT repeat_region 16081562..16081867 FT /rpt_family="AluSx" FT repeat_region 16081868..16082656 FT /rpt_family="L1MC2" FT repeat_region 16082657..16082882 FT /rpt_family="AluJb" FT repeat_region 16082893..16083127 FT /rpt_family="(GAAA)n" FT repeat_region 16083128..16083228 FT /rpt_family="(GAAA)n" FT repeat_region 16083230..16083621 FT /rpt_family="L1MC2" FT repeat_region 16083624..16083909 FT /rpt_family="AluJo" FT repeat_region complement(16084161..16084642) FT /rpt_family="L1PA10" FT repeat_region 16084764..16084797 FT /rpt_family="MER76" FT repeat_region 16084799..16085097 FT /rpt_family="AluSx" FT repeat_region 16085101..16085616 FT /rpt_family="MER76" FT repeat_region 16085682..16086056 FT /rpt_family="THE1C" FT repeat_region 16086782..16086838 FT /rpt_family="MER51B" FT repeat_region 16087241..16087275 FT /rpt_family="(GA)n" FT repeat_region complement(16087367..16087941) FT /rpt_family="LTR9" FT repeat_region complement(16087938..16088504) FT /rpt_family="LTR9" FT repeat_region 16088879..16089353 FT /rpt_family="LTR19A" FT repeat_region complement(16089538..16089748) FT /rpt_family="MIR" FT exon complement(16090630..16090792) FT /pseudo FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 467..520); 81% identity." FT repeat_region complement(16090894..16091045) FT /rpt_family="MIR" FT exon complement(16091719..16091801) FT /pseudo FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 439..466); 89% identity." FT exon complement(16091984..16092048) FT /pseudo FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 418..448); 81% identity." FT exon complement(16092144..16092277) FT /pseudo FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 373..417); 91% identity." FT repeat_region 16092413..16092531 FT /rpt_family="(TAAAA)n" FT repeat_region complement(16092858..16092960) FT /rpt_family="(TAA)n" FT repeat_region complement(16093179..16093201) FT /rpt_family="AT_rich" FT repeat_region 16093330..16093629 FT /rpt_family="AluSg" FT repeat_region 16094572..16094872 FT /rpt_family="AluJo" FT repeat_region 16095695..16095805 FT /rpt_family="(TAGA)n" FT repeat_region 16095961..16096483 FT /rpt_family="L1MA7" FT repeat_region complement(16096537..16096674) FT /rpt_family="(TA)n" FT repeat_region complement(16096703..16097005) FT /rpt_family="AluSx" FT repeat_region 16097249..16098243 FT /rpt_family="L1MA4A" FT repeat_region 16098255..16098559 FT /rpt_family="AluSq" FT repeat_region 16098610..16098825 FT /rpt_family="LINE2" FT repeat_region complement(16099428..16099560) FT /rpt_family="(GA)n" FT repeat_region complement(16099563..16099863) FT /rpt_family="AluSg" FT repeat_region complement(16099880..16100063) FT /rpt_family="L1PB2" FT repeat_region complement(16100068..16100531) FT /rpt_family="L1PB2" FT exon complement(16100727..16100856) FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 330..372); 84% identity." FT exon complement(16101057..16101123) FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 307..329); 87% identity." FT repeat_region 16101140..16101178 FT /rpt_family="(CA)n" FT repeat_region complement(16101613..16101678) FT /rpt_family="(GA)n" FT repeat_region 16102030..16102149 FT /rpt_family="(CAGA)n" FT repeat_region 16102169..16102289 FT /rpt_family="(CAGA)n" FT repeat_region 16102341..16102453 FT /rpt_family="(CAAAA)n" FT exon complement(16102924..16103146) FT /pseudo FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 233..306); 66% identity." FT repeat_region 16103119..16103210 FT /rpt_family="THE1-INTERNAL" FT exon complement(16103221..16103266) FT /pseudo FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 217..232); 81% identity." FT exon complement(16103902..16104023) FT /pseudo FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 176..216); 90% identity." FT repeat_region 16105488..16105857 FT /rpt_family="THE1C" FT repeat_region 16105858..16107372 FT /rpt_family="THE1C-internal" FT repeat_region 16107373..16107837 FT /rpt_family="THE1B" FT repeat_region complement(16107881..16107915) FT /rpt_family="LINE2" FT repeat_region complement(16107959..16108060) FT /rpt_family="MIR" FT exon complement(16108113..16108240) FT /pseudo FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 134..175); 76% identity." FT exon complement(16108338..16108391) FT /pseudo FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 116..133); 72% identity." FT exon complement(16109702..16109831) FT /pseudo FT /note="Exon, CYP4F3-like pseudogene. DPS similarity to FT sp|Q08477|CPF3_HUMAN CYTOCHROME P450 IVF3 (LEUKOTRIENE-B4 FT OMEGA-HYDROXYLASE) (LEUKOTRIENE-B4 20-MONOOXYGENASE) FT (CYTOCHROME P450-LTB-OMEGA) gi|422975|pir||A46661 FT leukotriene B4 omega- hydroxylase, P-450LTB FT omega=cytochrome P-450 superfamily member - human gi|391716 FT (D12620) cytochrome P-450LTBV [Homo sapiens]; (residues FT 72..115); 34% identity." FT repeat_region 16109856..16110009 FT /rpt_family="AluSg/x" FT repeat_region complement(16110043..16111162) FT /rpt_family="HERVE" FT repeat_region complement(16111333..16111624) FT /rpt_family="HERVE" FT misc_feature complement(16111660..16111773) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 76.000" FT repeat_region complement(16112065..16112232) FT /rpt_family="HERVR" FT repeat_region complement(16112007..16112629) FT /rpt_family="HERVE" FT repeat_region complement(16113940..16114127) FT /rpt_family="HSRIRT" FT repeat_region complement(16114146..16114277) FT /rpt_family="LTR4" FT repeat_region 16114668..16115964 FT /rpt_family="L1PA15" FT repeat_region 16116196..16116497 FT /rpt_family="AluSq" FT repeat_region 16117128..16117429 FT /rpt_family="AluSx" FT repeat_region complement(16117588..16117608) FT /rpt_family="AT_rich" FT repeat_region 16117849..16118150 FT /rpt_family="AluJb" FT repeat_region complement(16118436..16118734) FT /rpt_family="AluSx" FT repeat_region 16118735..16118800 FT /rpt_family="MLT2A" FT repeat_region 16119044..16119159 FT /rpt_family="MER4_internal" FT repeat_region 16119171..16119462 FT /rpt_family="AluSg" FT repeat_region complement(16119492..16119517) FT /rpt_family="AT_rich" FT repeat_region 16119539..16119850 FT /rpt_family="AluJo" FT repeat_region complement(16120255..16120551) FT /rpt_family="AluSx" FT repeat_region 16120662..16120935 FT /rpt_family="MER4_internal" FT repeat_region 16120936..16121239 FT /rpt_family="AluSx" FT repeat_region 16121253..16121466 FT /rpt_family="AluJo" FT repeat_region 16121469..16121917 FT /rpt_family="MER4_internal" FT repeat_region complement(16121918..16122219) FT /rpt_family="AluY" FT repeat_region 16122235..16123085 FT /rpt_family="MER4_internal" FT repeat_region complement(16123099..16123308) FT /rpt_family="LTR3" FT misc_feature complement(16123344..16123492) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 61.000" FT repeat_region 16123627..16123767 FT /rpt_family="AluSq/x" FT repeat_region 16123772..16124066 FT /rpt_family="AluSx" FT repeat_region complement(16124856..16125809) FT /rpt_family="LTR13" FT misc_feature 16127814..16127883 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 57.000" FT repeat_region complement(16127962..16128117) FT /rpt_family="SN5" FT repeat_region 16132227..16132528 FT /rpt_family="AluSx" FT misc_feature 16134526..16134640 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 83.000" FT repeat_region 16134801..16135105 FT /rpt_family="AluSq" FT repeat_region complement(16136371..16136647) FT /rpt_family="SN5" FT misc_feature complement(16137946..16138251) FT /note="BLASTN similarity to AA933992 (1..305); match: 0.95, FT score: 5.5e-92; database searched: month.na; on95h02.s1 FT Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1564467 FT 3'" FT repeat_region 16138580..16138882 FT /rpt_family="AluJb" FT repeat_region 16138960..16139259 FT /rpt_family="AluSx" FT repeat_region 16139546..16139838 FT /rpt_family="AluSx" FT repeat_region 16139840..16139974 FT /rpt_family="(GAA)n" FT repeat_region 16140246..16140318 FT /rpt_family="AluJ/FLAM" FT repeat_region complement(16140555..16140600) FT /rpt_family="(GGAA)n" FT repeat_region 16140738..16140862 FT /rpt_family="FLAM_C" FT repeat_region complement(16140912..16141870) FT /rpt_family="LTR13" FT misc_feature 16141912..16142599 FT /note="DDS similarity to overlapping ESTs: ~(32138..32554) FT AA085390 zn07c08.s1 Stratagene hNT neuron (#937233) Homo FT sapiens cDNA clone 546734 3'; Score: 792 Identity: 410/419 FT (97%).~(32825..32443) AA082877 zn07c08.r1 Stratagene hNT FT neuron (#937233) Homo sapiens cDNA clone 546734 5' similar FT to contains element MSR1 repetitive element; Score: 649 FT Identity: 368/392 (93%). ~(32825..32547) AA082877 FT zn07c08.r1 Stratagene hNT neuron (#937233) Homo sapiens FT cDNA clone 546734 5' similar to contains element MSR1 FT repetitive element; Score: 547 Identity: 278/280 (99%)." FT misc_feature 16142285..16142421 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 58.000" FT misc_feature 16142786..16142874 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 63.000" FT repeat_region 16145322..16145365 FT /rpt_family="(GGAA)n" FT misc_feature complement(16146083..16146180) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 60.000" FT misc_feature complement(16146219..16146869) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 66.000" FT repeat_region 16147566..16147796 FT /rpt_family="SN5" FT repeat_region 16149642..16149732 FT /rpt_family="SN5" FT misc_feature complement(16150307..16150388) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 88.000" FT misc_feature complement(16151088..16151363) FT /note="DDS similarity to AA426343 zv53h01.s1 Soares testis FT NHT Homo sapiens cDNA clone 757393 3'; Score: 529 Identity: FT 272/277 (98%)." FT misc_feature 16180349 FT /note="NOTE: Forced join 28806" FT misc_feature 16285563..16285673 FT /note="NOTE: 113bp single subclone 54713-54823" FT repeat_region 17934095..17934400 FT /rpt_family="AluSx" FT repeat_region complement(17934408..17934455) FT /rpt_family="MIR" FT repeat_region complement(17934816..17934889) FT /rpt_family="(GA)n" FT repeat_region complement(17934894..17935185) FT /rpt_family="AluSx" FT repeat_region complement(17935957..17936038) FT /rpt_family="MIR" FT repeat_region 17936429..17936729 FT /rpt_family="AluY" FT repeat_region 17936782..17936891 FT /rpt_family="FLAM_A" FT repeat_region 17936913..17937213 FT /rpt_family="AluSx" FT mRNA complement(join(17936961..17937719,17940917..17941027, FT 17941312..17941429,17942037..17942209,17942483..17942607, FT 17943328..17943517,17943599..17943738,17945380..17945530, FT 17945661..17945812,17945892..17946024,17946733..17946860, FT 17947938..17948022,17948741..17948872,17949072..17949199, FT 17950286..17950472,17951039..17951150,17952198..17952355, FT 17952449..17952571,17953125..17953419,17953836..17953981, FT 17954189..17954300,17954586..17954709,17955043..17955282)) FT /gene="JAK3" FT /product="Human JAK family protein tyrosine kinase (JAK3) FT mRNA, complete cds." FT repeat_region complement(17937459..17937515) FT /rpt_family="MIR" FT CDS complement(join(17937552..17937719,17940917..17941027, FT 17941312..17941429,17942037..17942209,17942483..17942607, FT 17943328..17943517,17943599..17943738,17945380..17945530, FT 17945661..17945812,17945892..17946024,17946733..17946860, FT 17947938..17948022,17948741..17948872,17949072..17949199, FT 17950286..17950472,17951039..17951150,17952198..17952355, FT 17952449..17952571,17953125..17953419,17953836..17953981, FT 17954189..17954300,17954586..17954709,17955043..17955226)) FT /codon_start=1 FT /gene="JAK3" FT /product="JAK3_HUMAN" FT /note="TYROSINE-PROTEIN KINASE JAK3; JANUS KINASE 3; JAK-3; FT LEUKOCYTE JANUS KINASE; L-JAK" FT /protein_id="AAD22741.1" FT /translation="MAPPSEETPLIPQRSCSLLSTEAGALHVLLPARGPGPPQRLSFSF FT GDHLAEDLCVQAAKASGILPVYHSLFALATEDLSCWFPPSHIFSVEDASTQVLLYRIRF FT YFPNWFGLEKCHRFGLRKDLASAILDLPVLEHLFAQHRSDLVSGRLPVGLSLKEQGECL FT SLAVLDLARMAREQAQRPGELLKTVSYKACLPPSLRDLIQGLSFVTRRRIRRTVRRALR FT RVAACQADRHSLMAKYIMDLERLDPAGAAETFHVGLPGALGGHDGLGLLRVAGDGGIAW FT TQGEQEVLQPFCDFPEIVDISIKQAPRVGPAGEHRLVTVTRTDNQILEAEFPGLPEALS FT FVALVDGYFRLTTDSQHFFCKEVAPPRLLEEVAEQCHGPITLDFAINKLKTGGSRPGSY FT VLRRSPQDFDSFLLTVCVQNPLGPDYKGCLIRRSPTGTFLLVGLSRPHSSLRELLATCW FT DGGLHVDGVAVTLTSCCIPRPKEKSNLIVVQRGHSPPTSSLVQPQSQYQLSQMTFHKIP FT ADSLEWHENLGHGSFTKIYRGCRHEVVDGEARKTEVLLKVMDAKHKNCMESFLEAASLM FT SQVSYRHLVLLHGVCMAGDSTMVQEFVHLGAIDMYLRKRGHLVPASWKLQVVKQLAYAL FT NYLEDKGLPHGNVSARKVLLAREGADGSPPFIKLSDPGVSPAVLSLEMLTDRIPWVAPE FT CLREAQTLSLEADKWGFGATVWEVFSGVTMPISALDPAKKLQFYEDRQQLPAPKWTELA FT LLIQQCMAYEPVQRPSFRAVIRDLNSLISSDYELLSDPTPGALAPRDGLWNGAQLYACQ FT DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE FT IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS FT SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS FT PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALC FT RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCET FT HAFTAHPEGKHHSLSFS" FT repeat_region complement(17937790..17938083) FT /rpt_family="AluSx" FT repeat_region complement(17938154..17938455) FT /rpt_family="AluSq" FT repeat_region 17938484..17938731 FT /rpt_family="AluSp" FT repeat_region complement(17939028..17939063) FT /rpt_family="(CAAAA)n" FT repeat_region complement(17939064..17939358) FT /rpt_family="AluJb" FT repeat_region complement(17939359..17939497) FT /rpt_family="AluJb" FT repeat_region 17939542..17939607 FT /rpt_family="LINE2" FT repeat_region 17939686..17939945 FT /rpt_family="AluJo" FT repeat_region complement(17939972..17940267) FT /rpt_family="AluSx" FT repeat_region 17940286..17940579 FT /rpt_family="AluJo" FT repeat_region complement(17940603..17940796) FT /rpt_family="MIR" FT repeat_region 17942802..17943087 FT /rpt_family="AluSx" FT repeat_region complement(17943117..17943197) FT /rpt_family="MIR" FT repeat_region 17944237..17944366 FT /rpt_family="FLAM_A" FT repeat_region 17944380..17944681 FT /rpt_family="AluSx" FT repeat_region complement(17944694..17944848) FT /rpt_family="AluJb" FT repeat_region 17944875..17945183 FT /rpt_family="AluSx" FT repeat_region complement(17947090..17947380) FT /rpt_family="AluSx" FT repeat_region complement(17948223..17948523) FT /rpt_family="AluSx" FT repeat_region complement(17948530..17948652) FT /rpt_family="FLAM_C" FT repeat_region complement(17948953..17949019) FT /rpt_family="MIR" FT repeat_region complement(17949344..17949522) FT /rpt_family="AluSg/x" FT repeat_region complement(17949523..17949823) FT /rpt_family="AluSx" FT repeat_region complement(17950548..17950847) FT /rpt_family="AluSc" FT repeat_region 17951291..17951591 FT /rpt_family="AluY" FT repeat_region complement(17951633..17951925) FT /rpt_family="AluJo" FT repeat_region 17954405..17954505 FT /rpt_family="MIR" FT repeat_region complement(17955106..17955137) FT /rpt_family="GC_rich" FT repeat_region 17955326..17955625 FT /rpt_family="AluSx" FT repeat_region 17955626..17955651 FT /rpt_family="(GAAA)n" FT repeat_region 17955894..17955973 FT /rpt_family="AluJ/FLAM" FT repeat_region complement(17955975..17956263) FT /rpt_family="AluSx" FT repeat_region 17956264..17956327 FT /rpt_family="AluJo/FLAM" FT repeat_region 17956330..17956573 FT /rpt_family="AluS" FT repeat_region complement(17956634..17956926) FT /rpt_family="AluSx" FT repeat_region complement(17957393..17957693) FT /rpt_family="AluSx" FT repeat_region complement(17957696..17958006) FT /rpt_family="AluSx" FT repeat_region 17958036..17958160 FT /rpt_family="FLAM_A" FT repeat_region complement(17958270..17958352) FT /rpt_family="FLAM" FT repeat_region 17959263..17959396 FT /rpt_family="AluSq/x" FT repeat_region 17959397..17959682 FT /rpt_family="AluSx" FT repeat_region 17960264..17960566 FT /rpt_family="AluSx" FT repeat_region 17960584..17960897 FT /rpt_family="AluJb" FT repeat_region complement(17961020..17961088) FT /rpt_family="LINE2" FT repeat_region 17961717..17962016 FT /rpt_family="AluSx" FT repeat_region complement(17962017..17962038) FT /rpt_family="AT_rich" FT repeat_region 17962367..17962664 FT /rpt_family="AluJb" FT repeat_region 17962670..17962783 FT /rpt_family="L1" FT repeat_region 17962785..17962908 FT /rpt_family="AluY" FT repeat_region 17962921..17963243 FT /rpt_family="AluSg" FT repeat_region 17963246..17963404 FT /rpt_family="AluJb" FT repeat_region 17963435..17963547 FT /rpt_family="FLAM_A" FT repeat_region 17963557..17963800 FT /rpt_family="L1" FT repeat_region 17963805..17963957 FT /rpt_family="MLT1A1" FT repeat_region 17963960..17964130 FT /rpt_family="AluJb" FT repeat_region 17964131..17964365 FT /rpt_family="AluSp" FT repeat_region 17964370..17964677 FT /rpt_family="AluSx" FT repeat_region complement(17965176..17965474) FT /rpt_family="AluSx" FT repeat_region 17965499..17965799 FT /rpt_family="AluSx" FT repeat_region 17965807..17965997 FT /rpt_family="AluSp" FT repeat_region complement(17966370..17966452) FT /rpt_family="MIR" FT repeat_region complement(17966829..17967114) FT /rpt_family="AluSx" FT repeat_region 17967232..17967448 FT /rpt_family="AluJo" FT repeat_region 17967450..17967616 FT /rpt_family="AluJb" FT repeat_region 17967617..17967917 FT /rpt_family="AluY" FT repeat_region 17967944..17968240 FT /rpt_family="AluSx" FT repeat_region 17968321..17968621 FT /rpt_family="AluSx" FT repeat_region 17968632..17968933 FT /rpt_family="AluSx" FT repeat_region 17969055..17969356 FT /rpt_family="AluSq" FT repeat_region complement(17969481..17969782) FT /rpt_family="AluSx" FT repeat_region complement(17969785..17969912) FT /rpt_family="AluSg/x" FT repeat_region complement(17970424..17970444) FT /rpt_family="GC_rich" FT misc_feature 17970766..17970783 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 62.000" FT misc_feature 17971286..17971383 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 84.000" FT mRNA join(17970747..17970783,17972102..17972281, FT 17972903..17973032,17973727..17973836,17973980..17974124) FT /product="Human ribosomal protein L18a homologue mRNA" FT CDS join(17970766..17970783,17972102..17972281, FT 17972903..17973032,17973727..17973836,17973980..17974072) FT /codon_start=1 FT /product="ribosomal protein L18a" FT /protein_id="AAC62828.1" FT /translation="MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFW FT YFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAG FT AVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQH FT KPRFTTKRPNTFF" FT repeat_region 17972370..17972404 FT /rpt_family="AluJb" FT repeat_region complement(17975008..17975155) FT /rpt_family="FRAM" FT repeat_region complement(17975653..17975942) FT /rpt_family="AluSg" FT repeat_region 17976136..17976406 FT /rpt_family="AluJb" FT repeat_region complement(17977152..17977261) FT /rpt_family="(TGGA)n" FT repeat_region complement(17977263..17977441) FT /rpt_family="(TGGA)n" FT repeat_region complement(17977443..17977539) FT /rpt_family="(TGGA)n" FT repeat_region 17977736..17977902 FT /rpt_family="AluJb" FT repeat_region complement(17978445..17978747) FT /rpt_family="AluSq" FT repeat_region complement(17978799..17978978) FT /rpt_family="AluJ" FT repeat_region 17978979..17979111 FT /rpt_family="AluSq/x" FT repeat_region complement(17979130..17979250) FT /rpt_family="AluJ" FT misc_feature 17979725..17979922 FT /note="BLASTN similarity to AQ181525 (8..205); match: 1, FT score: 2.0e-75; database searched: month.na; FT HS_3219_A1_F04_MR CIT Approved Human Genomic Sperm Library FT D Homo sapiens genomic clone Plate=3219 Col=7 Row=K," FT repeat_region 17979783..17979898 FT /rpt_family="LINE2" FT repeat_region complement(17979935..17980071) FT /rpt_family="AluJb" FT repeat_region 17980126..17980180 FT /rpt_family="LINE2" FT repeat_region complement(17980380..17980658) FT /rpt_family="AluSc" FT repeat_region complement(17980681..17980977) FT /rpt_family="AluSx" FT repeat_region complement(17981311..17981616) FT /rpt_family="AluJo" FT misc_feature 17981634..17982886 FT /note="BLASTN similarity to AJ224353 (150..1402); match: FT 0.99, score: 0.0; database searched: nt; Homo sapiens NIS FT gene, promoter region and partial CDS" FT misc_feature 17981634..17983181 FT /note="BLASTN similarity to AF059566 (193..1740); match: FT 0.99, score: 0.0; database searched: nt; Homo sapiens FT sodium-iodide symporter gene, promoter and partial cds" FT repeat_region 17982016..17982072 FT /rpt_family="(TGAA)n" FT repeat_region complement(17982118..17982195) FT /rpt_family="MIR" FT repeat_region 17982451..17982525 FT /rpt_family="MIR" FT mRNA join(17982782..17983485,17984947..17985012, FT 17985303..17985354,17985473..17985540,17986761..17986915, FT 17988532..17988672,17988773..17988902,17991674..17991762, FT 17992769..17992881,17992958..17993028,17994490..17994576, FT 17994659..17994855,17999140..17999264,18001695..18001810, FT 18004522..18004897) FT /product="Human sodium iodide symporter mRNA" FT repeat_region 17982872..17982942 FT /rpt_family="(CAGA)n" FT CDS join(17983129..17983485,17984947..17985012, FT 17985303..17985354,17985473..17985540,17986761..17986915, FT 17988532..17988672,17988773..17988902,17991674..17991762, FT 17992769..17992881,17992958..17993028,17994490..17994576, FT 17994659..17994855,17999140..17999264,18001695..18001810, FT 18004522..18004686) FT /codon_start=1 FT /product="sodium iodide symporter" FT /protein_id="AAC62827.1" FT /translation="MEAVETGERPTFGAWDYGVFALMLLVSTGIGLWVGLARGGQRSAE FT DFFTGGRRLAALPVGLSLSASFMSAVQVLGVPSEAYRYGLKFLWMCLGQLLNSVLTALL FT FMPVFYRLGLTSTYEYLEMRFSRAVRLCGTLQYIVATMLYTGIVIYAPALILNQVTGLD FT IWASLLSTGIICTFYTAVGGMKAVVWTDVFQVVVMLSGFWVVLARGVMLVGGPRQVLTL FT AQNHSRINLMDFNPDPRSRYTFWTFVVGGTLVWLSMYGVNQAQVQRYVACRTEKQAKLA FT LLINQVGLFLIVSSAACCGIVMFVFYTDCDPLLLGRISAPDQYMPLLVLDIFEDLPGVP FT GLFLACAYSGTLSTASTSINAMAAVTVEDLIKPRLRSLAPRKLVIISKGLSLIYGSACL FT TVAALSSLLGGGVLQGSFTVMGVISGPLLGAFILGMFLPACNTPGVLAGLGAGLALSLW FT VALGATLYPPSEQTMRVLPSSAARCVALSVNASGLLDPALLPANDSSRAPSSGMDASRP FT ALADSFYAISYLYYGALGTLTTVLCGALISCLTGPTKRSTLAPGLLWWDLARQTASVAP FT KEEVAILDDNLVKGPEELPTGNKKPPGFLPTNEDRLFFLGQKELEGAGSWTPCVGHDGG FT RDQQETNL" FT repeat_region complement(17983274..17983309) FT /rpt_family="GC_rich" FT repeat_region complement(17983723..17983745) FT /rpt_family="GC_rich" FT repeat_region 17983844..17983975 FT /rpt_family="MIR" FT repeat_region 17983988..17984278 FT /rpt_family="AluSx" FT repeat_region 17984285..17984564 FT /rpt_family="AluSg" FT repeat_region 17985897..17986196 FT /rpt_family="AluSx" FT repeat_region 17986292..17986600 FT /rpt_family="AluJo" FT repeat_region complement(17986601..17986684) FT /rpt_family="MIR" FT repeat_region 17986963..17987254 FT /rpt_family="AluJb" FT repeat_region 17987255..17987387 FT /rpt_family="AluSp" FT repeat_region 17987391..17987689 FT /rpt_family="AluSc" FT repeat_region 17987690..17987856 FT /rpt_family="AluSp" FT repeat_region complement(17988092..17988123) FT /rpt_family="AT_rich" FT repeat_region complement(17988124..17988416) FT /rpt_family="AluSx" FT repeat_region complement(17988967..17989025) FT /rpt_family="LINE2" FT repeat_region 17989033..17989333 FT /rpt_family="AluSx" FT repeat_region 17989503..17989803 FT /rpt_family="AluSx" FT repeat_region 17989820..17990122 FT /rpt_family="AluSp" FT repeat_region complement(17990313..17990407) FT /rpt_family="MIR" FT repeat_region 17990514..17990600 FT /rpt_family="MIR" FT repeat_region complement(17990714..17991009) FT /rpt_family="AluSx" FT repeat_region complement(17991023..17991323) FT /rpt_family="AluSq" FT repeat_region 17991324..17991523 FT /rpt_family="AluJo" FT repeat_region complement(17991996..17992032) FT /rpt_family="(GGAA)n" FT repeat_region complement(17992036..17992074) FT /rpt_family="LINE2" FT repeat_region complement(17992075..17992375) FT /rpt_family="AluSx" FT repeat_region complement(17993148..17993483) FT /rpt_family="AluJo" FT repeat_region complement(17993491..17993790) FT /rpt_family="AluY" FT repeat_region complement(17993795..17993928) FT /rpt_family="AluSq/x" FT repeat_region 17994155..17994242 FT /rpt_family="AluSg/x" FT repeat_region complement(17994583..17994618) FT /rpt_family="GC_rich" FT repeat_region complement(17994961..17995003) FT /rpt_family="LINE2" FT repeat_region complement(17995105..17995217) FT /rpt_family="AluJb" FT repeat_region 17995302..17995598 FT /rpt_family="AluSq" FT repeat_region complement(17995599..17995654) FT /rpt_family="L1MB6" FT repeat_region complement(17995667..17995802) FT /rpt_family="AluSq/x" FT repeat_region complement(17995814..17996105) FT /rpt_family="AluJo" FT repeat_region complement(17996124..17996159) FT /rpt_family="(TAAA)n" FT repeat_region complement(17996185..17996489) FT /rpt_family="AluJb" FT repeat_region complement(17996493..17996663) FT /rpt_family="L1MB7" FT repeat_region complement(17996682..17996947) FT /rpt_family="AluSx" FT repeat_region 17996962..17997023 FT /rpt_family="Alu" FT repeat_region complement(17997024..17997113) FT /rpt_family="L1MB7" FT repeat_region complement(17997119..17997416) FT /rpt_family="AluSx" FT repeat_region complement(17997417..17997680) FT /rpt_family="L1MB7" FT repeat_region 17997681..17997903 FT /rpt_family="AluJb" FT repeat_region complement(17997915..17998097) FT /rpt_family="L1MB7" FT repeat_region complement(17998098..17998394) FT /rpt_family="AluSx" FT repeat_region complement(17998407..17998714) FT /rpt_family="AluY" FT repeat_region complement(17998717..17998843) FT /rpt_family="L1MB7" FT repeat_region 17999398..17999454 FT /rpt_family="(CAT)n" FT repeat_region complement(17999455..17999727) FT /rpt_family="AluSx" FT repeat_region complement(17999782..17999900) FT /rpt_family="(TA)n" FT repeat_region 17999924..18000225 FT /rpt_family="AluSq" FT repeat_region 18000227..18000300 FT /rpt_family="(GAAA)n" FT repeat_region complement(18000302..18000462) FT /rpt_family="AluJo" FT repeat_region complement(18000758..18000835) FT /rpt_family="LINE2" FT repeat_region complement(18000877..18001178) FT /rpt_family="AluSq" FT repeat_region complement(18001200..18001495) FT /rpt_family="AluJo" FT repeat_region complement(18001507..18001550) FT /rpt_family="MIR" FT repeat_region complement(18002013..18002314) FT /rpt_family="AluSx" FT repeat_region 18002825..18003118 FT /rpt_family="AluSx" FT repeat_region 18003121..18003163 FT /rpt_family="(GGAA)n" FT repeat_region 18003164..18003466 FT /rpt_family="AluSq" FT repeat_region 18003467..18003496 FT /rpt_family="(GA)n" FT repeat_region complement(18003497..18003672) FT /rpt_family="LINE2" FT repeat_region complement(18003785..18003903) FT /rpt_family="POLY_A" FT repeat_region complement(18003908..18004211) FT /rpt_family="AluJb" FT repeat_region complement(18004955..18005256) FT /rpt_family="AluSx" FT repeat_region complement(18005285..18005438) FT /rpt_family="AluSq/x" FT repeat_region 18005587..18006028 FT /rpt_family="MLT1C" FT repeat_region complement(18006044..18006336) FT /rpt_family="AluSx" FT repeat_region 18006465..18006748 FT /rpt_family="AluSx" FT repeat_region 18006749..18006804 FT /rpt_family="(TA)n" FT repeat_region complement(18006987..18007135) FT /rpt_family="L1ME1" FT repeat_region 18007136..18007261 FT /rpt_family="FLAM_C" FT repeat_region complement(18007276..18007581) FT /rpt_family="AluY" FT repeat_region complement(18007641..18007939) FT /rpt_family="AluSx" FT repeat_region complement(18007973..18008274) FT /rpt_family="AluSx" FT repeat_region 18008484..18008767 FT /rpt_family="AluSx" FT repeat_region 18008768..18008795 FT /rpt_family="(CAAT)n" FT repeat_region complement(18009111..18009190) FT /rpt_family="L1ME1" FT repeat_region 18009193..18009490 FT /rpt_family="AluJb" FT repeat_region complement(18009490..18009745) FT /rpt_family="AluSq" FT repeat_region 18009807..18009983 FT /rpt_family="THE1A" FT repeat_region complement(18009999..18010303) FT /rpt_family="AluSq" FT repeat_region 18010304..18010502 FT /rpt_family="THE1A" FT repeat_region 18010503..18012079 FT /rpt_family="THE1A-internal" FT repeat_region 18012080..18012430 FT /rpt_family="THE1A" FT repeat_region complement(18012431..18012607) FT /rpt_family="L1MB7" FT repeat_region complement(18012622..18012700) FT /rpt_family="L1MB7" FT repeat_region complement(18048541..18048841) FT /rpt_family="AluSp" FT repeat_region 18048872..18049163 FT /rpt_family="AluJo" FT repeat_region complement(18049402..18049705) FT /rpt_family="AluJb" FT repeat_region 18049924..18050223 FT /rpt_family="AluSx" FT repeat_region complement(18050326..18050404) FT /rpt_family="MIR" FT repeat_region complement(18050439..18050731) FT /rpt_family="AluSx" FT repeat_region complement(18050732..18051021) FT /rpt_family="AluSx" FT repeat_region 18051155..18051286 FT /rpt_family="MER58B" FT repeat_region 18051294..18051573 FT /rpt_family="AluSg" FT repeat_region 18051575..18051875 FT /rpt_family="AluY" FT repeat_region 18052038..18052335 FT /rpt_family="AluSx" FT repeat_region 18053085..18053209 FT /rpt_family="LINE2" FT misc_feature 18053465..18053772 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 97.000~~BLASTN matches FT to: AI094423, T52136," FT misc_feature 18054070..18054184 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~BLASTN FT matches to: M78422, T47623, AI094423" FT misc_feature 18054317..18054520 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 85.000~~BLASTN matches FT to: T47623, M78422, AI094423, AF086307, T04884, T52023" FT misc_feature 18054373..18054783 FT /note="BLASTN similarity to AF086307 (1..411); match: 1, FT score: 6.7e-163; database searched: month.na; Homo sapiens FT full length insert cDNA clone ZD51E04" FT misc_feature complement(18054522..18054560) FT /note="BLASTN similarity to T04884 (236..274); match: 0.76, FT score: 6.2e-90; database searched: est; EST02772 Homo FT sapiens cDNA clone HFBCB84." FT misc_feature complement(18054562..18054793) FT /note="BLASTN similarity to T04884 (1..232); match: 0.97, FT score: 6.2e-90; database searched: est; EST02772 Homo FT sapiens cDNA clone HFBCB84." FT misc_feature complement(18054639..18054794) FT /note="BLASTN similarity to T52023 (35..190); match: 0.95, FT score: 6.6e-52; database searched: est; yb29h07.s1 Homo FT sapiens cDNA clone 72637 3' similar to gb:D00096 FT TRANSTHYRETIN PRECURSOR (HUMAN)." FT repeat_region 18055575..18055868 FT /rpt_family="AluSx" FT repeat_region 18056230..18056519 FT /rpt_family="AluSx" FT repeat_region 18056809..18057110 FT /rpt_family="AluJo" FT repeat_region 18057446..18057735 FT /rpt_family="AluSx" FT repeat_region 18057736..18057894 FT /rpt_family="AluSp" FT repeat_region 18058053..18058083 FT /rpt_family="tRNA-Leu-CTG" FT repeat_region 18058089..18058232 FT /rpt_family="MIR" FT repeat_region 18058609..18058653 FT /rpt_family="GC_rich" FT repeat_region complement(18058742..18058803) FT /rpt_family="GC_rich" FT repeat_region complement(18058881..18058936) FT /rpt_family="GC_rich" FT repeat_region complement(18059109..18059201) FT /rpt_family="GC_rich" FT repeat_region 18059226..18059392 FT /rpt_family="(GGA)n" FT repeat_region 18059414..18059521 FT /rpt_family="(GGGA)n" FT repeat_region 18059659..18059755 FT /rpt_family="MER53" FT repeat_region complement(18061012..18061156) FT /rpt_family="LINE2" FT repeat_region 18061916..18061960 FT /rpt_family="POLY_A" FT repeat_region 18062735..18062770 FT /rpt_family="MIR" FT repeat_region 18062919..18063050 FT /rpt_family="GC_rich" FT repeat_region complement(18063671..18063745) FT /rpt_family="MIR" FT repeat_region 18064470..18064723 FT /rpt_family="AluJb" FT repeat_region 18065027..18065285 FT /rpt_family="AluSx" FT repeat_region 18065565..18065863 FT /rpt_family="AluSx" FT repeat_region 18065906..18066079 FT /rpt_family="FAM" FT repeat_region 18066088..18066390 FT /rpt_family="AluSq" FT repeat_region complement(18066398..18066437) FT /rpt_family="AT_rich" FT repeat_region complement(18066737..18067046) FT /rpt_family="AluSx" FT repeat_region complement(18067126..18067238) FT /rpt_family="LINE2" FT repeat_region 18067271..18067571 FT /rpt_family="AluJo" FT CDS join(<18208606..18208641,18218397..18218428, FT 18232495..18232583,18232660..18232732,18233483..18233561, FT 18234027..18234184,18234390..18234465,18234749..18234958, FT 18235075..18235176,18235452..18235584,18239210..18239268, FT 18239676..18239761,18241304..18241512,18242719..18242857, FT 18245389..18245521,18245627..>18245791) FT /codon_start=1 FT /product="KIAA0561 protein [AA 1-593]" FT /note="putative serine/threonine protein kinase; KIAA0561 FT protein most similar to serine/threonine family of protein FT kinases: 71% identical to microtubule-associated FT serine/threonine protein kinase MAST205 - mouse >gi|406058 FT (U02313) protein kinase [Mus musculus]; 89% identical over FT 240 residues to (AD000092) hypothetical human FT serine-threonine protein kinase R31240_1 [Homo sapiens]; FT 42% identical over 217 residues to FT serine/threonine-specific protein kinase (EC 2.7.1.-), FT Rho-associated - human >gi|1276901 (U43195)~Rho-associated, FT coiled-coil containing protein kinase p160ROCK [Homo FT sapiens]" FT /protein_id="AAC62830.1" FT /translation="DESSLLRRRGLQKELSLPRRGRGCRSGNRKSLVVGTPSPTLSRPL FT SPLSVPTAGSSPLDSPRNFSAASALNFPFARRADGRRWSLASLPSSGYGTNTPSSTLSS FT SSSSRERLHQLPFQPTPDELHFLSKHFRSSENVLDEEGGRSPRLRPRSRSLSPGRATGT FT FDNEIVMMNHVYRERFPKATAQMEGRLQEFLTAYAPGARLALADGVLGFIHHQIVELAR FT DCLAKSGENLVTSRYFLEMQEKLERLLQDAHERSDSEEVSFIVQLVRKLLIIISRPARL FT LECLEFDPEEFYHLLEAAEGHAREGQGIKTDLPQYIIGQLGLAKDPLEEMVPLSHLEEE FT QPPAPESPESRALVGQSRRKPCESDFETIKLISNGAYGAVYLVRHRDTRQRFAIKKINK FT QNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETRRHLCMVMEYVEGGDCATLLKNM FT GPLPVDMARLYFAETVLALEYLHNYGIVHRDLKPDNLLITSLGHIKLTDFGLSKIGLMS FT MATNLYEGHIEKDAREFIDKQVCGTPEYIAPEVIFRQGYGKPVDWWAMGVVLYEFLVGC FT VPFFGDTPEELFGQVVS" FT repeat_region 18214067..18214367 FT /rpt_family="AluSx" FT repeat_region complement(18214525..18214619) FT /rpt_family="MIR" FT repeat_region 18214740..18215009 FT /rpt_family="AluJb" FT repeat_region complement(18215010..18215031) FT /rpt_family="AT_rich" FT misc_feature complement(18215308..18215458) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 73.000" FT repeat_region complement(18215736..18215789) FT /rpt_family="MIR" FT repeat_region 18215896..18216193 FT /rpt_family="AluSx" FT repeat_region 18216211..18216502 FT /rpt_family="AluSq" FT repeat_region complement(18216897..18217064) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(18217065..18217346) FT /rpt_family="AluSc" FT repeat_region complement(18217351..18217378) FT /rpt_family="(TAAA)n" FT repeat_region complement(18217379..18217680) FT /rpt_family="AluSq" FT repeat_region complement(18217704..18217925) FT /rpt_family="AluJb" FT repeat_region complement(18218618..18218687) FT /rpt_family="MIR" FT repeat_region 18218820..18219119 FT /rpt_family="AluSx" FT repeat_region complement(18219176..18219477) FT /rpt_family="AluSx" FT repeat_region complement(18219663..18219730) FT /rpt_family="LINE2" FT repeat_region complement(18219834..18220041) FT /rpt_family="LINE2" FT repeat_region complement(18220695..18220737) FT /rpt_family="GC_rich" FT repeat_region complement(18220801..18220988) FT /rpt_family="GC_rich" FT repeat_region complement(18221012..18221053) FT /rpt_family="(CGGA)n" FT repeat_region 18221654..18221698 FT /rpt_family="MIR" FT repeat_region complement(18222028..18222067) FT /rpt_family="MIR" FT repeat_region complement(18222343..18222625) FT /rpt_family="AluSg" FT repeat_region complement(18222855..18222960) FT /rpt_family="LINE2" FT repeat_region complement(18222974..18223141) FT /rpt_family="AluSx" FT repeat_region complement(18223144..18223444) FT /rpt_family="AluSx" FT repeat_region complement(18223445..18223580) FT /rpt_family="AluSx" FT repeat_region complement(18224104..18224266) FT /rpt_family="AluSx" FT repeat_region complement(18224272..18224571) FT /rpt_family="AluSq" FT repeat_region complement(18224572..18224707) FT /rpt_family="AluSx" FT repeat_region 18224728..18224920 FT /rpt_family="LINE2" FT repeat_region complement(18224998..18225298) FT /rpt_family="AluSx" FT repeat_region complement(18225911..18225973) FT /rpt_family="LINE2" FT repeat_region 18226511..18226704 FT /rpt_family="LINE2" FT repeat_region complement(18226902..18227086) FT /rpt_family="AluSg/x" FT repeat_region complement(18227100..18227404) FT /rpt_family="AluSq" FT repeat_region 18227438..18227735 FT /rpt_family="AluSq" FT repeat_region complement(18228144..18228171) FT /rpt_family="MIR" FT repeat_region complement(18228599..18228621) FT /rpt_family="GC_rich" FT repeat_region complement(18228697..18228801) FT /rpt_family="(CGGG)n" FT repeat_region complement(18228843..18228960) FT /rpt_family="GC_rich" FT repeat_region 18229554..18229675 FT /rpt_family="MIR" FT repeat_region 18230289..18230328 FT /rpt_family="MIR" FT repeat_region complement(18231347..18231528) FT /rpt_family="AluSx" FT repeat_region complement(18231534..18231830) FT /rpt_family="AluSp" FT repeat_region complement(18231831..18231965) FT /rpt_family="AluSx" FT repeat_region complement(18231966..18232266) FT /rpt_family="AluJo" FT repeat_region complement(18233019..18233069) FT /rpt_family="LINE2" FT repeat_region 18235634..18235935 FT /rpt_family="AluSx" FT repeat_region 18236270..18236568 FT /rpt_family="AluSg" FT repeat_region 18236581..18236881 FT /rpt_family="AluSx" FT repeat_region 18236884..18237050 FT /rpt_family="AluJo/FRAM" FT repeat_region 18237300..18237590 FT /rpt_family="AluJo" FT repeat_region complement(18237591..18237889) FT /rpt_family="AluY" FT repeat_region 18237890..18238067 FT /rpt_family="AluJo" FT repeat_region 18238076..18238211 FT /rpt_family="AluSx" FT repeat_region 18238212..18238511 FT /rpt_family="AluSx" FT repeat_region 18238512..18238687 FT /rpt_family="AluSx" FT repeat_region 18240486..18240752 FT /rpt_family="AluSx" FT repeat_region 18240779..18240919 FT /rpt_family="AluJo" FT repeat_region 18241949..18242217 FT /rpt_family="AluSx" FT repeat_region 18242229..18242529 FT /rpt_family="AluSc" FT repeat_region complement(18242660..18242691) FT /rpt_family="GC_rich" FT repeat_region complement(18243494..18243521) FT /rpt_family="LINE2" FT repeat_region 18243631..18243922 FT /rpt_family="AluSx" FT repeat_region complement(18244190..18244362) FT /rpt_family="AluSg/x" FT repeat_region complement(18244363..18244662) FT /rpt_family="AluSx" FT repeat_region 18244927..18245025 FT /rpt_family="AluSq/x" FT repeat_region 18245038..18245074 FT /rpt_family="(CA)n" FT repeat_region 18245080..18245288 FT /rpt_family="AluJo" FT repeat_region 18245993..18246292 FT /rpt_family="AluSx" FT repeat_region complement(18246293..18246486) FT /rpt_family="LINE2" FT repeat_region complement(18246501..18246542) FT /rpt_family="(GGGA)n" FT mRNA join(<18248048..18248171,18249825..18249934, FT 18252692..18252825,18254573..18254817,18255276..18255503, FT 18255813..18256039,18256553..18256675,18257691..18257827, FT 18258253..18258434,18260001..18262494) FT /product="Homo sapiens mRNA for KIAA0561 protein, partial FT cds" FT CDS join(<18248048..18248171,18249825..18249934, FT 18252692..18252825,18254573..18254817,18255276..18255503, FT 18255813..18256039,18256553..18256675,18257691..18257827, FT 18258253..18258434,18260001..18260536) FT /codon_start=1 FT /product="KIAA0561 protein [AA 628-1308]" FT /protein_id="AAD22670.1" FT /translation="GGTHEVKQHPFFLALDWAGLLRHKAEFVPQLEAEDDTSYFDTRSE FT RYRHLGSEDDETNDEESSTEIPQFSSCSHRFSKVYSSSEFLAVQPTPTFAERSFSEDRE FT EGWERSEVDYGRRLSADIRLRSWTSSGSSCQSSSSQPERGPSPSLLNTISLDTMPKFAF FT SSEDEGVGPGPAGPKRPVFILGEPDPPPAATPVMPKPSSLSADTAALSHARLRSNSIGA FT RHSTPRPLDAGRGRRLGGPRDPAPEKSRASSSGGSGGGSGGRVPKSASVSALSLIITAD FT DGSGGPLMSPLSPRSLSSNPSSRDSSPSRDPSPVCGSLRPPIVIHSSGKKYGFSLRAIR FT VYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKSG FT NKISLRTTALENTSIKVGPARKNVAKGRMARRSKRSRRRETQDRRKSLFKKISKQTSVL FT HTSRSFSSGLHHSLSSSESLPGSPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSS FT SPASPAAAGHTRPSSLHGLAAKLGPPRPKTGRRKSTSSIPPSPLACPPISAPPPRSPSP FT LPGHPPAPARSPRLRRGQSADKLGTGERLDGEAGRRTRGPEAELVVMRRLHLSERRDSF FT KKQEAVQEVSFDEPQEEATGLPTSVPQIAVEGEEAVPVALGPTGRD" FT repeat_region 18248664..18248702 FT /rpt_family="MIR" FT repeat_region 18248733..18249038 FT /rpt_family="AluSp" FT repeat_region complement(18249131..18249294) FT /rpt_family="AluSg/x" FT repeat_region complement(18249306..18249608) FT /rpt_family="AluSx" FT repeat_region 18249651..18249754 FT /rpt_family="LINE2" FT repeat_region complement(18250019..18250122) FT /rpt_family="FLAM_C" FT repeat_region complement(18250133..18250434) FT /rpt_family="AluSx" FT repeat_region complement(18250440..18250570) FT /rpt_family="AluSg" FT repeat_region complement(18250571..18250616) FT /rpt_family="(CAAAA)n" FT repeat_region complement(18250628..18250928) FT /rpt_family="AluY" FT repeat_region 18250954..18251206 FT /rpt_family="AluSx" FT repeat_region complement(18251207..18251576) FT /rpt_family="L1MB5" FT repeat_region complement(18251605..18251903) FT /rpt_family="AluSx" FT repeat_region 18252051..18252084 FT /rpt_family="MIR" FT repeat_region complement(18252184..18252482) FT /rpt_family="AluSx" FT repeat_region complement(18252533..18252664) FT /rpt_family="FLAM_C" FT repeat_region complement(18253160..18253459) FT /rpt_family="AluY" FT repeat_region complement(18253460..18253638) FT /rpt_family="AluJo" FT repeat_region 18253639..18253941 FT /rpt_family="AluSx" FT repeat_region complement(18253953..18254073) FT /rpt_family="AluJo" FT repeat_region 18254105..18254395 FT /rpt_family="AluSx" FT repeat_region 18256967..18257272 FT /rpt_family="AluJo" FT repeat_region complement(18257912..18258212) FT /rpt_family="AluSx" FT repeat_region 18258684..18258828 FT /rpt_family="AluJ" FT repeat_region 18258830..18259122 FT /rpt_family="AluSp" FT repeat_region 18259123..18259291 FT /rpt_family="AluJ" FT repeat_region 18259433..18259723 FT /rpt_family="AluSx" FT repeat_region 18259724..18259876 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(18260158..18260255) FT /rpt_family="(CGGG)n" FT repeat_region complement(18260796..18261095) FT /rpt_family="AluSg" FT repeat_region 18261961..18262020 FT /rpt_family="MIR" FT repeat_region complement(18262039..18262209) FT /rpt_family="MIR" FT repeat_region complement(18262751..18262849) FT /rpt_family="AluJb" FT repeat_region 18262881..18263182 FT /rpt_family="AluSp" FT repeat_region 18263988..18264101 FT /rpt_family="(CGG)n" FT repeat_region complement(18264156..18264187) FT /rpt_family="GC_rich" FT repeat_region complement(18264547..18264644) FT /rpt_family="GC_rich" FT repeat_region 18264679..18264722 FT /rpt_family="MIR" FT repeat_region 18265538..18265593 FT /rpt_family="MIR" FT repeat_region 18265605..18265741 FT /rpt_family="AluJo/FLAM" FT repeat_region 18265742..18266026 FT /rpt_family="AluSx" FT repeat_region complement(18266077..18266204) FT /rpt_family="MIR" FT mRNA join(18266450..18267011,18271281..18271373, FT 18271729..18271779,18271864..18271995,18272089..18272305, FT 18272776..18272861,18273012..18273120,18273218..18273316, FT 18273777..18273957,18274073..18274198,18276970..18277112, FT 18277940..18278116,18279285..18279356,18279536..18279706, FT 18279897..18280716) FT /gene="PIK3R2" FT /product="H.sapiens mRNA for p85 beta subunit of FT phosphatidyl-inositol-3-kinase" FT CDS join(18266690..18267011,18271281..18271373, FT 18271729..18271779,18271864..18271995,18272089..18272305, FT 18272776..18272861,18273012..18273120,18273218..18273316, FT 18273777..18273957,18274073..18274198,18276970..18277112, FT 18277940..18278116,18279285..18279356,18279536..18279706, FT 18279897..18280104) FT /codon_start=1 FT /gene="PIK3R2" FT /product="P85B_HUMAN" FT /function="BINDS TO ACTIVATED (PHOSPHORYLATED) FT PROTEIN-TYROSINEKINASES, THROUGH ITS SH2 DOMAIN, AND ACTS FT AS AN ADAPTER, MEDIATING THE ASSOCIATION OF THE P110 FT CATALYTIC UNIT TO THE PLASMA MEMBRANE" FT /note="PI3-KINASE P85-BETA SUBUNIT; PTDINS-3-KINASE FT P85-BETA" FT /protein_id="AAD22671.1" FT /translation="MAGPEGFQYRALYPFRRERPEDLELLPGDVLVVSRAALQALGVAE FT GGERCPQSVGWMPGLNERTRQRGDFPGTYVEFLGPVALARPGPRPRGPRPLPARPRDGA FT PEPGLTLPDLPEQFSPPDVAPPLLVKLVEAIERTGLDSESHYRPELPAPRTDWSLSDVD FT QWDTAALADGIKSFLLALPAPLVTPEASAEARRALREAAGPVGPALEPPTLPLHRALTL FT RFLLQHLGRVASRAPALGPAVRALGATFGPLLLRAPPPPSSPPPGGAPDGSEPSPDFPA FT LLVEKLLQEHLEEQEVAPPALPPKPPKAKPASTVLANGGSPPSLQDAEWYWGDISREEV FT NEKLRDTPDGTFLVRDASSKIQGEYTLTLRKGGNNKLIKVFHRDGHYGFSEPLTFCSVV FT DLINHYRHESLAQYNAKLDTRLLYPVSKYQQDQIVKEDSVEAVGAQLKVYHQQYQDKSR FT EYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQTQEKCSKEYLERFRREGNEKE FT MQRILLNSERLKSRIAEIHESRTKLEQQLRAQASDNREIDKRMNSLKPDLMQLRKIRDQ FT YLVWLTQKGARQKKINEWLGIKNETEDQYALMEDEDDLPHHEERTWYVGKINRTQAEEM FT LSGKRDGTFLIRESSQRGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNLYGSLKELVL FT HYQHASLVQHNDALTVTLAHPVRAPGPGPPPAAR" FT repeat_region 18266923..18266991 FT /rpt_family="GC_rich" FT repeat_region 18268223..18268280 FT /rpt_family="MIR" FT repeat_region 18268352..18268423 FT /rpt_family="MIR" FT repeat_region 18269017..18269319 FT /rpt_family="AluSx" FT repeat_region 18269336..18269449 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(18269454..18269549) FT /rpt_family="MIR" FT repeat_region complement(18269567..18269628) FT /rpt_family="MLT1C" FT repeat_region complement(18269651..18269951) FT /rpt_family="AluSq" FT repeat_region complement(18269962..18270096) FT /rpt_family="FLAM_C" FT repeat_region complement(18270101..18270175) FT /rpt_family="MLT1C" FT repeat_region complement(18270253..18270554) FT /rpt_family="AluSx" FT repeat_region complement(18270562..18270847) FT /rpt_family="AluSx" FT repeat_region complement(18270851..18271025) FT /rpt_family="MLT1C" FT repeat_region complement(18271940..18271996) FT /rpt_family="GC_rich" FT repeat_region complement(18272090..18272115) FT /rpt_family="GC_rich" FT repeat_region complement(18272177..18272234) FT /rpt_family="GC_rich" FT repeat_region complement(18272243..18272287) FT /rpt_family="(CGG)n" FT repeat_region 18273412..18273711 FT /rpt_family="AluSq" FT repeat_region 18274360..18274646 FT /rpt_family="AluJo" FT repeat_region 18274655..18274956 FT /rpt_family="AluSq" FT repeat_region 18275080..18275110 FT /rpt_family="MIR" FT repeat_region 18275172..18275302 FT /rpt_family="FLAM_A" FT repeat_region complement(18275446..18275710) FT /rpt_family="AluSx" FT repeat_region 18275712..18275751 FT /rpt_family="POLY_A" FT repeat_region 18275756..18275897 FT /rpt_family="AluSx" FT repeat_region 18275899..18276192 FT /rpt_family="AluSg" FT repeat_region 18276193..18276354 FT /rpt_family="AluSx" FT repeat_region complement(18276355..18276475) FT /rpt_family="FLAM_A" FT repeat_region complement(18276479..18276541) FT /rpt_family="MIR" FT repeat_region 18277239..18277537 FT /rpt_family="AluSx" FT repeat_region 18277663..18277899 FT /rpt_family="AluJo" FT repeat_region 18278382..18278693 FT /rpt_family="AluSq" FT repeat_region complement(18278847..18278951) FT /rpt_family="MIR" FT repeat_region 18280065..18280101 FT /rpt_family="GC_rich" FT repeat_region complement(18280238..18280329) FT /rpt_family="(GA)n" FT repeat_region 18280737..18281039 FT /rpt_family="AluSx" FT repeat_region 18281640..18281713 FT /rpt_family="MIR" FT repeat_region complement(18281901..18282113) FT /rpt_family="AluJo" FT repeat_region 18282115..18282419 FT /rpt_family="AluSx" FT repeat_region complement(18282420..18282515) FT /rpt_family="FLAM_A" FT repeat_region complement(18283710..18283747) FT /rpt_family="MIR" FT misc_feature 18283951..18284029 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 51.000" FT repeat_region complement(18284614..18284702) FT /rpt_family="(CAG)n" FT CDS join(<18284627..18284783,18285850..>18285996) FT /codon_start=2 FT /product="INIP_HUMAN [AA 4-104]" FT /note="GAMMA-INTERFERON-INDUCIBLE PROTEIN IP-30 PRECURSOR" FT /protein_id="AAD22672.1" FT /translation="RHTFAPAAMTLSPLLLFLPPLLLLLDVPTAAVQASPLQALDFFGN FT GPPVNYKTGNLYLRGPLKKSNAPLVNVTLYYEALCGGCRAFLIRELFPTWLLVMEI" FT repeat_region 18285402..18285694 FT /rpt_family="AluSc" FT mRNA join(<18285993..18286032,18286121..18286195, FT 18286415..18286507,18287950..18288102,18288521..18288574, FT 18288659..18288923) FT /gene="IFI30" FT /product="IFI30" FT /note="Multiple mismatches with IFI30 (IP-30) mRNA FT accession J03909." FT repeat_region complement(18286953..18287257) FT /rpt_family="AluSx" FT repeat_region complement(18287320..18287389) FT /rpt_family="L2" FT repeat_region complement(18287620..18287755) FT /rpt_family="L2" FT repeat_region 18288186..18288257 FT /rpt_family="AluSp/q" FT STS 18288770..18288908 FT /gene="IFI30" FT /standard_name="SHGC-32638" FT /note="amplicon size: 138" FT repeat_region 18288983..18289180 FT /rpt_family="AluSq" FT repeat_region 18289193..18289474 FT /rpt_family="AluJo" FT repeat_region complement(18289475..18289782) FT /rpt_family="AluSp" FT repeat_region complement(18289926..18290055) FT /rpt_family="FLAM_C" FT repeat_region 18290136..18290271 FT /rpt_family="AluSq/x" FT repeat_region 18290272..18290407 FT /rpt_family="AluSx" FT repeat_region 18290408..18290715 FT /rpt_family="AluY" FT repeat_region 18290716..18290887 FT /rpt_family="AluSx" FT repeat_region complement(18290970..18291136) FT /rpt_family="MER31-int" FT repeat_region complement(18291137..18291758) FT /rpt_family="AluSp" FT repeat_region complement(18291759..18291861) FT /rpt_family="MER31-int" FT repeat_region complement(18291909..18292063) FT /rpt_family="AluJb" FT repeat_region complement(18292064..18292360) FT /rpt_family="AluSc" FT repeat_region complement(18292361..18292505) FT /rpt_family="AluJb" FT repeat_region complement(18292522..18292640) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(18292641..18292892) FT /rpt_family="AluSg" FT repeat_region 18293171..18293293 FT /rpt_family="AluJb" FT repeat_region 18293294..18293586 FT /rpt_family="AluSp" FT repeat_region 18293587..18293766 FT /rpt_family="AluJb" FT repeat_region complement(18293842..18294139) FT /rpt_family="AluJb" FT repeat_region complement(18294163..18294483) FT /rpt_family="AluJb" FT repeat_region complement(18294596..18294823) FT /rpt_family="MER31-int" FT repeat_region 18294824..18294959 FT /rpt_family="AluSp" FT repeat_region 18294960..18295263 FT /rpt_family="AluSx" FT repeat_region complement(18295413..18295514) FT /rpt_family="MER66A" FT repeat_region complement(18295517..18295799) FT /rpt_family="AluJo" FT repeat_region complement(18295827..18296122) FT /rpt_family="AluSx" FT repeat_region complement(18296127..18296434) FT /rpt_family="AluSx" FT repeat_region complement(18296583..18296683) FT /rpt_family="MER34" FT repeat_region complement(18296692..18296853) FT /rpt_family="AluJb" FT repeat_region 18296864..18297168 FT /rpt_family="AluSx" FT repeat_region 18297189..18297487 FT /rpt_family="AluSx" FT repeat_region complement(18297491..18297597) FT /rpt_family="MER34" FT repeat_region complement(18297662..18297963) FT /rpt_family="AluSx" FT repeat_region complement(18297980..18298294) FT /rpt_family="AluJb" FT repeat_region complement(18298304..18298601) FT /rpt_family="AluSx" FT repeat_region 18298679..18298803 FT /rpt_family="LTR54B" FT repeat_region complement(18298839..18298983) FT /rpt_family="FLAM_C" FT repeat_region 18299016..18299308 FT /rpt_family="AluY" FT repeat_region 18299313..18299383 FT /rpt_family="LTR54B" FT repeat_region complement(18299412..18299710) FT /rpt_family="AluY" FT repeat_region 18299711..18299731 FT /rpt_family="AT_rich" FT repeat_region 18299732..18300095 FT /rpt_family="L1" FT repeat_region complement(18300097..18300246) FT /rpt_family="L1PA7" FT repeat_region 18300247..18300539 FT /rpt_family="AluY" FT repeat_region complement(18300540..18300646) FT /rpt_family="L1PA7" FT repeat_region complement(18300647..18300812) FT /rpt_family="AluSg/x" FT repeat_region 18300815..18300850 FT /rpt_family="(TTTG)n" FT repeat_region complement(18300851..18301131) FT /rpt_family="AluSc" FT repeat_region 18301232..18301360 FT /rpt_family="FLAM_C" FT repeat_region 18301490..18301781 FT /rpt_family="AluSx" FT repeat_region 18301849..18301927 FT /rpt_family="MER58" FT repeat_region complement(18301928..18301961) FT /rpt_family="MER4E" FT repeat_region 18301962..18302256 FT /rpt_family="AluY" FT repeat_region complement(18302257..18302323) FT /rpt_family="MER4E" FT repeat_region complement(18302324..18302624) FT /rpt_family="AluSx" FT repeat_region complement(18302645..18302719) FT /rpt_family="MER58" FT repeat_region 18302720..18303104 FT /rpt_family="MER51B" FT repeat_region complement(18303105..18303129) FT /rpt_family="MER58" FT repeat_region 18303173..18303476 FT /rpt_family="AluSx" FT repeat_region complement(18305118..18305168) FT /rpt_family="L2" FT repeat_region 18305711..18305765 FT /rpt_family="(CCCCG)n" FT repeat_region 18306074..18306357 FT /rpt_family="AluSx" FT repeat_region 18306363..18306661 FT /rpt_family="AluY" FT repeat_region 18307402..18307552 FT /rpt_family="FLAM_C" FT mRNA complement(join(18308205..18308470,18309535..18309659, FT 18311137..18311255,18313323..18313550,18314706..18314732)) FT /gene="RAB3A" FT /product="RAB3A, member RAS oncogene family" FT CDS complement(join(18308280..18308470,18309535..18309659, FT 18311137..18311255,18313323..18313550)) FT /codon_start=1 FT /gene="RAB3A" FT /product="RAB3A, member RAS oncogene family" FT /note="RAS-associated protein RAB3A" FT /protein_id="AAF67385.1" FT /translation="MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADD FT SFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI FT TNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFE FT ASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC" FT repeat_region complement(18308554..18308624) FT /rpt_family="MER103" FT repeat_region complement(18308684..18308851) FT /rpt_family="FRAM" FT repeat_region 18309114..18309194 FT /rpt_family="L2" FT repeat_region 18309352..18309406 FT /rpt_family="L2" FT repeat_region complement(18309868..18309969) FT /rpt_family="FLAM_C" FT repeat_region complement(18309973..18310264) FT /rpt_family="AluSg" FT repeat_region complement(18310343..18310633) FT /rpt_family="AluSp" FT repeat_region 18310809..18311117 FT /rpt_family="AluJb" FT repeat_region 18311464..18311754 FT /rpt_family="AluJo" FT repeat_region 18311771..18312104 FT /rpt_family="AluSx" FT repeat_region 18312110..18312424 FT /rpt_family="AluSx" FT repeat_region complement(18312428..18312613) FT /rpt_family="L2" FT repeat_region 18312644..18312753 FT /rpt_family="FLAM_A" FT repeat_region 18312761..18313068 FT /rpt_family="AluJb" FT repeat_region 18314341..18314439 FT /rpt_family="(CACG)n" FT repeat_region 18316638..18316924 FT /rpt_family="AluJo" FT repeat_region 18317176..18317484 FT /rpt_family="AluSx" FT repeat_region complement(18317487..18317552) FT /rpt_family="L2" FT repeat_region 18317553..18317848 FT /rpt_family="AluSq" FT repeat_region complement(18317849..18317942) FT /rpt_family="L2" FT repeat_region 18318047..18318391 FT /rpt_family="AluSg" FT repeat_region 18318394..18318405 FT /rpt_family="L1ME4A" FT repeat_region complement(18318406..18318698) FT /rpt_family="AluY" FT repeat_region 18318699..18318865 FT /rpt_family="L1ME4A" FT repeat_region 18319365..18319431 FT /rpt_family="MIR" FT repeat_region complement(18319923..18320061) FT /rpt_family="AluSq" FT repeat_region complement(18320062..18320358) FT /rpt_family="AluSg" FT repeat_region complement(18320359..18320497) FT /rpt_family="AluSq" FT mRNA complement(18320498..>18322086) FT /gene="PDE4C" FT /product="PDE4C" FT repeat_region complement(18320498..18320803) FT /rpt_family="AluSx" FT repeat_region complement(18320819..18321131) FT /rpt_family="AluJo" FT CDS complement(18321739..>18322086) FT /codon_start=1 FT /gene="PDE4C" FT /product="PDE4C [amino acids 597-712]" FT /note="phosphodiesterase 4C, cAMP-specific (dunce FT (Drosophila)-homolog phosphodiesterase E1)" FT /protein_id="AAF67386.1" FT /translation="VGFIDYIAHPLWETWADLVHPDAQDLLDTLEDNREWYQSKIPRSP FT SDLTNPERDGPDRFQFELTLEEAEEEDEEEEEEGEETALAKEALELPDTELLSPEAGPD FT PGDLPLDNQRT" FT repeat_region 18321844..18321892 FT /rpt_family="CT-rich" FT repeat_region 18322133..18322273 FT /rpt_family="L2" FT mRNA complement(join(<18320856..18322086,18322569..18322751, FT 18324178..18324300,18327551..18327699,18328959..18329058, FT 18329144..18329308,18329750..18329848,18330044..18330207, FT 18331036..18331129,18331213..18331325,18331684..18331733, FT 18331915..18331988,18332071..18332107,18332942..18333133, FT 18343748..18344003)) FT /gene="PDE4C" FT /product="H.sapiens HSPDE4C1 gene for 3',5'-cyclic AMP FT phosphodiesterase, partial CDS" FT mRNA complement(join(18321362..18322086,18322569..18322751, FT 18324178..18324300,18327551..18327705,18328959..18329058, FT 18329144..18329308,18329750..18329848,18330044..18330469, FT 18331036..18331129,18331213..18331988,18332071..18332107, FT 18332942..18333135,18343748..18344183)) FT /gene="PDE4C" FT /product="Homo sapiens cAMP phosphodiesterase (PDE4C) mRNA, FT 4C-426 isoform, complete cds" FT mRNA complement(join(18321418..18322086,18322569..18322751, FT 18324178..18324300,18327551..18327705,18328959..18329058, FT 18329144..18329308,18329750..18329848,18330044..18330207, FT 18331036..18331129,18331213..18331325,18331684..18331733, FT 18331915..18331988,18332071..18332107,18332942..18333133, FT 18343748..>18344199)) FT /gene="PDE4C" FT /product="Homo sapiens cAMP phosphodiesterase (PDE4C) mRNA, FT 4C-791 isoform" FT mRNA complement(join(18321739..18322086,18322569..18322751, FT 18324178..18324300,18327551..18327705,18328959..18329058, FT 18329750..18329848,18330044..18330207,18331036..18331129, FT 18331915..18331932)) FT /gene="PDE4C" FT /product="Homo sapiens cAMP phosphodiesterase (PDE4C) mRNA, FT 4C-delta109 isoform, partial cds" FT mRNA complement(join(18321739..18322086,18322569..18322751, FT 18324178..18324300,18327551..18327705,18328959..18329058, FT 18329144..18329308,18329750..18329848,18330044..18330207, FT 18331036..18331129,18331915..>18332042)) FT /gene="PDE4C" FT /product="Homo sapiens cAMP phosphodiesterase (PDE4C) mRNA, FT 4C-delta54 isoform, partial cds" FT CDS complement(join(18321739..18322086,18322569..18322751, FT 18324178..18324300,18327551..18327705,18328959..18329058, FT 18329144..18329308,18329750..18329848,18330044..18330207, FT 18331036..18331129,18331213..18331325,18331684..18331733, FT 18331915..18331988,18332071..18332107,18332942..18333133, FT 18343748..>18344199)) FT /codon_start=1 FT /gene="PDE4C" FT /product="PDE4C-791" FT /note="ISOFORM OF CAMP-DEPENDENT 3',5'-CYCLIC FT PHOSPHODIESTERASE 4C" FT /protein_id="AAC83050.1" FT /translation="APSGHRQLLGVGPTLSPSSTFYRFSTSGADSSSLSPPLPALGRTR FT EQTLLGARSRGRVLLPAIPDPFLWRMENLGVGEGAEACSRLSRSRGRHSMTRAPKHLWR FT QPRRPIRIQQRFYSDPDKSAGCRERDLSPRPELRKSRLSWPVSSCRRFDLENGLSCGRR FT ALDPQSSPGLGRIMQAPVPHSQRRESFLYRSDSDYELSPKAMSRNSSVASDLHGEDMIV FT TPFAQVLASLRTVRSNVAALARQQCLGAAKQGPVGNPSSSNQLPPAEDTGQKLALETLD FT ELDWCLDQLETLQTRHSVGEMASNKFKRILNRELTHLSETSRSGNQVSEYISRTFLDQQ FT TEVELPKVTAEEAPQPMSRISGLHGLCHSASLSSATVPRFGVQTDQEEQLAKELEDTNK FT WGLDVFKVAELSGNRPLTAIIFSIFQERDLLKTFQIPADTLATYLLMLEGHYHANVAYH FT NSLHAADVAQSTHVLLATPALEAVFTDLEILAALFASAIHDVDHPGVSNQFLINTNSEL FT ALMYNDASVLENHHLAVGFKLLQAENCDIFQNLSAKQRLSLRRMVIDMVLATDMSKHMN FT LLADLKTMVETKKVTSLGVLLLDNYSDRIQVLQNLVHCADLSNPTKPLPLYRQWTDRIM FT AEFFQQGDRERESGLDISPMCDKHTASVEKSQVGFIDYIAHPLWETWADLVHPDAQDLL FT DTLEDNREWYQSKIPRSPSDLTNPERDGPDRFQFELTLEEAEEEDEEEEEEGEETALAK FT EALELPDTELLSPEAGPDPGDLPLDNQRT" FT CDS complement(join(18321739..18322086,18322569..18322751, FT 18324178..18324300,18327551..18327699,18328959..18329058, FT 18329144..18329308,18329750..18329848,18330044..18330207, FT 18331036..18331129,18331213..18331325,18331684..18331733, FT 18331915..18331988,18332071..18332107,18332942..18333133, FT 18343748..18343989)) FT /codon_start=1 FT /gene="PDE4C" FT /product="CN4C_HUMAN" FT /function="ADENOSINE 3',5'-CYCLIC PHOSPHODIESTERASE" FT /EC_number="3.1.4.17" FT /note="CAMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE 4C; FT DPDE1; PDE21" FT /protein_id="AAC83047.1" FT /translation="MENLGVGEGAEACSRLSRSRGRHSMTRAPKHLWRQPRRPIRIQQR FT FYSDPDKSAGCRERDLSPRPELRKSRLSWPVSSCRRFDLENGLSCGRRALDPQSSPGLG FT RIMQAPVPHSQRRESFLYRSDSDYELSPKAMSRNSSVASDLHGEDMIVTPFAQVLASLR FT TVRSNVAALARQQCLGAAKQGPVGNPSSSNQLPPAEDTGQKLALETLDELDWCLDQLET FT LQTRHSVGEMASNKFKRILNRELTHLSETSRSGNQVSEYISRTFLDQQTEVELPKVTAE FT EAPQPMSRISGLHGLCHSASLSSATVPRFGVQTDQEEQLAKELEDTNKWGLDVFKVAEL FT SGNRPLTAIIFSIFQERDLLKTFQIPADTLATYLLMLEGHYHANVAYHNSLHAADVAQS FT THVLLATPALEAVFTDLEILAALFASAIHDVDHPGVSNQFLINTKLALMYNDASVLENH FT HLAVGFKLLQAENCDIFQNLSAKQRLSLRRMVIDMVLATDMSKHMNLLADLKTMVETKK FT VTSLGVLLLDNYSDRIQVLQNLVHCADLSNPTKPLPLYRQWTDRIMAEFFQQGDRERES FT GLDISPMCDKHTASVEKSQVGFIDYIAHPLWETWADLVHPDAQDLLDTLEDNREWYQSK FT IPRSPSDLTNPERDGPDRFQFELTLEEAEEEDEEEEEEGEETALAKEALELPDTELLSP FT EAGPDPGDLPLDNQRT" FT CDS complement(join(18321739..18322086,18322569..18322751, FT 18324178..18324300,18327551..18327705,18328959..18329058, FT 18329750..18329848,18330044..18330207,18331036..18331129, FT 18331915..18331932)) FT /codon_start=1 FT /gene="PDE4C" FT /product="PDE4C-delta109" FT /note="ISOFORM OF CAMP-DEPENDENT 3',5'-CYCLIC FT PHOSPHODIESTERASE 4C" FT /protein_id="AAC83048.1" FT /translation="MPRSSQFKRILNRELTHLSETSRSGNQVSEYISRTFLDQQTEVEL FT PKVTAEEAPQPMSRISGLHGLCHSASLSSATVPRFGVQTDQEEQLAKELEDTNKWGLDV FT FKVAELSGNRPLTAIIFSIFQAVFTDLEILAALFASAIHDVDHPGVSNQFLINTNSELA FT LMYNDASVLENHHLAVGFKLLQAENCDIFQNLSAKQRLSLRRMVIDMVLATDMSKHMNL FT LADLKTMVETKKVTSLGVLLLDNYSDRIQVLQNLVHCADLSNPTKPLPLYRQWTDRIMA FT EFFQQGDRERESGLDISPMCDKHTASVEKSQVGFIDYIAHPLWETWADLVHPDAQDLLD FT TLEDNREWYQSKIPRSPSDLTNPERDGPDRFQFELTLEEAEEEDEEEEEEGEETALAKE FT ALELPDTELLSPEAGPDPGDLPLDNQRT" FT CDS complement(join(18321739..18322086,18322569..18322751, FT 18324178..18324300,18327551..18327705,18328959..18329058, FT 18329144..18329308,18329750..18329848,18330044..18330207, FT 18331036..18331129,18331915..>18332040)) FT /codon_start=1 FT /gene="PDE4C" FT /product="PDE4C-delta54" FT /note="ISOFORM OF CAMP-DEPENDENT 3',5'-CYCLIC FT PHOSPHODIESTERASE 4C" FT /protein_id="AAC83051.1" FT /translation="PLRIRPLLPTAYHLLPTGPGQSADRSEQRGGPCPPAMPRSSQFKR FT ILNRELTHLSETSRSGNQVSEYISRTFLDQQTEVELPKVTAEEAPQPMSRISGLHGLCH FT SASLSSATVPRFGVQTDQEEQLAKELEDTNKWGLDVFKVAELSGNRPLTAIIFSIFQER FT DLLKTFQIPADTLATYLLMLEGHYHANVAYHNSLHAADVAQSTHVLLATPALEAVFTDL FT EILAALFASAIHDVDHPGVSNQFLINTNSELALMYNDASVLENHHLAVGFKLLQAENCD FT IFQNLSAKQRLSLRRMVIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYSDR FT IQVLQNLVHCADLSNPTKPLPLYRQWTDRIMAEFFQQGDRERESGLDISPMCDKHTASV FT EKSQVGFIDYIAHPLWETWADLVHPDAQDLLDTLEDNREWYQSKIPRSPSDLTNPERDG FT PDRFQFELTLEEAEEEDEEEEEEGEETALAKEALELPDTELLSPEAGPDPGDLPLDNQR FT T" FT CDS complement(join(18321739..18322086,18322569..18322751, FT 18324178..18324300,18327551..18327705,18328959..18329058, FT 18329144..18329308,18329750..18329848,18330044..18330151)) FT /codon_start=1 FT /gene="PDE4C" FT /product="PDE4C-426" FT /note="ISOFORM OF CAMP-DEPENDENT 3',5'-CYCLIC FT PHOSPHODIESTERASE 4C" FT /protein_id="AAC83049.1" FT /translation="MSRISGLHGLCHSASLSSATVPRFGVQTDQEEQLAKELEDTNKWG FT LDVFKVAELSGNRPLTAIIFSIFQERDLLKTFQIPADTLATYLLMLEGHYHANVAYHNS FT LHAADVAQSTHVLLATPALEAVFTDLEILAALFASAIHDVDHPGVSNQFLINTNSELAL FT MYNDASVLENHHLAVGFKLLQAENCDIFQNLSAKQRLSLRRMVIDMVLATDMSKHMNLL FT ADLKTMVETKKVTSLGVLLLDNYSDRIQVLQNLVHCADLSNPTKPLPLYRQWTDRIMAE FT FFQQGDRERESGLDISPMCDKHTASVEKSQVGFIDYIAHPLWETWADLVHPDAQDLLDT FT LEDNREWYQSKIPRSPSDLTNPERDGPDRFQFELTLEEAEEEDEEEEEEGEETALAKEA FT LELPDTELLSPEAGPDPGDLPLDNQRT" FT repeat_region complement(18322845..18322886) FT /rpt_family="MIR" FT repeat_region complement(18322996..18323283) FT /rpt_family="AluJb" FT repeat_region complement(18323284..18323448) FT /rpt_family="FRAM" FT repeat_region complement(18323497..18323794) FT /rpt_family="AluSg1" FT repeat_region 18323822..18324107 FT /rpt_family="AluY" FT repeat_region 18324389..18324429 FT /rpt_family="MIR" FT repeat_region 18324686..18324740 FT /rpt_family="LINE2" FT repeat_region 18324787..18325079 FT /rpt_family="AluY" FT repeat_region 18325478..18325778 FT /rpt_family="AluSx" FT repeat_region 18326214..18326256 FT /rpt_family="LINE2" FT repeat_region complement(18326334..18326621) FT /rpt_family="AluSc" FT repeat_region complement(18326638..18326940) FT /rpt_family="AluSx" FT repeat_region complement(18327072..18327384) FT /rpt_family="AluSx" FT repeat_region complement(18327393..18327428) FT /rpt_family="MIR" FT repeat_region complement(18327975..18328275) FT /rpt_family="AluJb" FT repeat_region 18328427..18328724 FT /rpt_family="AluSx" FT repeat_region 18330352..18330648 FT /rpt_family="AluSq" FT repeat_region 18331441..18331530 FT /rpt_family="MIR" FT repeat_region complement(18331877..18331905) FT /rpt_family="GC_rich" FT repeat_region complement(18332435..18332735) FT /rpt_family="AluSx" FT repeat_region complement(18333392..18333506) FT /rpt_family="(GA)n" FT repeat_region complement(18333508..18333809) FT /rpt_family="AluJo" FT repeat_region complement(18333824..18334019) FT /rpt_family="AluSg" FT repeat_region complement(18334020..18334319) FT /rpt_family="AluSp" FT repeat_region complement(18334321..18334453) FT /rpt_family="AluSg" FT repeat_region 18336854..18336959 FT /rpt_family="(GA)n" FT repeat_region complement(18337150..18337220) FT /rpt_family="GC_rich" FT repeat_region complement(18337416..18337715) FT /rpt_family="AluJo" FT repeat_region complement(18337960..18337987) FT /rpt_family="MIR" FT repeat_region complement(18338712..18338747) FT /rpt_family="MIR" FT repeat_region complement(18339169..18339318) FT /rpt_family="MIR" FT repeat_region complement(18339445..18339472) FT /rpt_family="AT_rich" FT repeat_region complement(18339716..18339741) FT /rpt_family="(TAAAA)n" FT repeat_region complement(18339747..18340058) FT /rpt_family="AluSp" FT repeat_region complement(18340059..18340346) FT /rpt_family="AluSx" FT repeat_region complement(18340474..18340536) FT /rpt_family="MIR" FT repeat_region 18340597..18340791 FT /rpt_family="LINE2" FT repeat_region 18340940..18341030 FT /rpt_family="LINE2" FT repeat_region 18341034..18341334 FT /rpt_family="AluSq" FT repeat_region 18341371..18341555 FT /rpt_family="LINE2" FT misc_feature 18552804..18553449 FT /note="NOTE: Shatter libraries failed to resolve FT dinucleotide repeat region 56719-57364. Unsure number of FT repeat copies 56719-57364. Forced join 57179." FT repeat_region complement(18633816..18634114) FT /rpt_family="AluSx" FT repeat_region complement(18634117..18634423) FT /rpt_family="AluSq" FT repeat_region complement(18634475..18634516) FT /rpt_family="L1MB6" FT repeat_region complement(18634524..18634821) FT /rpt_family="AluSq" FT repeat_region 18634956..18635268 FT /rpt_family="AluJo" FT repeat_region 18635289..18635570 FT /rpt_family="AluSg" FT repeat_region complement(18635677..18635984) FT /rpt_family="AluSx" FT repeat_region complement(18635987..18636299) FT /rpt_family="AluJb" FT repeat_region complement(18636311..18636599) FT /rpt_family="AluSq" FT repeat_region 18636637..18636939 FT /rpt_family="AluY" FT repeat_region 18637034..18637178 FT /rpt_family="MIR" FT repeat_region complement(18637660..18637951) FT /rpt_family="AluY" FT repeat_region 18638057..18638350 FT /rpt_family="AluSx" FT repeat_region 18638426..18638600 FT /rpt_family="FRAM" FT repeat_region 18638660..18638954 FT /rpt_family="AluSg" FT repeat_region complement(18639028..18639300) FT /rpt_family="AluSq" FT repeat_region 18639306..18639403 FT /rpt_family="AluSg/x" FT repeat_region 18639422..18639619 FT /rpt_family="AluSg/x" FT repeat_region 18639620..18639920 FT /rpt_family="AluSg" FT repeat_region 18640039..18640264 FT /rpt_family="AluSg/x" FT repeat_region 18640265..18640341 FT /rpt_family="AluSg/x" FT repeat_region complement(18641062..18641324) FT /rpt_family="AluSg1" FT repeat_region complement(18641330..18641439) FT /rpt_family="FLAM_C" FT repeat_region 18641465..18641765 FT /rpt_family="AluY" FT repeat_region 18641768..18642065 FT /rpt_family="AluSc" FT repeat_region complement(18642109..18642193) FT /rpt_family="AluJo/FRAM" FT repeat_region 18642395..18642434 FT /rpt_family="MIR" FT misc_feature 18642567..18642999 FT /note="DDS similarity to overlapping ESTs:~(23630..24055) FT AA069831 zm67b07.s1 Stratagene neuroepithelium (#937231) FT Homo sapiens cDNA clone 530677 3'; Score: 627 Identity: FT 395/449 (87%).~~(23623..23966) W48683 zc45h08.s1 Soares FT senescent fibroblasts NbHSF Homo sapiens cDNA clone 325311 FT 3';~Score: 609 Identity: 326/345 (94%).~~Additional EST FT matches:~H16570, H45028, R37825, Z40550, F02707, M79056" FT CDS complement(join(18642979..18643065,18643474..18643605, FT 18644080..18644157,18648411..18648583,18649026..18649243, FT 18650181..18650269,18650361..18650530,18652489..18652609)) FT /codon_start=1 FT /gene="FKBP38" FT /product="FK-506 binding protein homologue" FT /protein_id="AAC28753.1" FT /translation="MGQPPAEEAEQPGALAREFLAAMEPEPAPAPAPEEWLDILGNGLL FT RKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEEPELVFTLGDCDVIQALDLSVP FT LMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAVDGPDLEMLTGQERVAL FT ANRKRECGNAHYQRADFVLAANSYDLAIKAITSSAKVDMTFEEEAQLLQLKVKCLNNLA FT ASQLKLDHYRAALRSCSLVLEHQPDNIKALFRKGKVLAQQGEYSEAIPILRAALKLEPS FT NKTIHAELSKLVKKHAAQRSTETALYRKMLGNPSRLPAKCPGKGAWSIPWKWLFGATAV FT ALGGVALSVVIAARN" FT misc_feature complement(18644081..18644158) FT /gene="FKBP38" FT /note="DDS similarity to HSU53083 Human clone 5/24 mRNA FT sequence; (85..7); 97% identity." FT repeat_region 18644227..18644314 FT /rpt_family="AluSg/x" FT repeat_region 18644317..18644533 FT /rpt_family="AluSg/x" FT repeat_region 18644535..18644833 FT /rpt_family="AluY" FT repeat_region 18644834..18645136 FT /rpt_family="AluY" FT repeat_region complement(18645390..18645568) FT /rpt_family="AluJo" FT repeat_region complement(18645572..18645595) FT /rpt_family="AT_rich" FT repeat_region complement(18645599..18645894) FT /rpt_family="AluSx" FT repeat_region complement(18645898..18645918) FT /rpt_family="AT_rich" FT repeat_region complement(18645948..18646170) FT /rpt_family="AluJo" FT repeat_region 18646301..18646549 FT /rpt_family="AluSg1" FT repeat_region complement(18647169..18647471) FT /rpt_family="AluJo" FT repeat_region complement(18647484..18647567) FT /rpt_family="LINE2" FT repeat_region complement(18647618..18647849) FT /rpt_family="LINE2" FT repeat_region 18647868..18648168 FT /rpt_family="AluSx" FT repeat_region 18648198..18648297 FT /rpt_family="MIR" FT misc_feature complement(18648411..18648583) FT /gene="FKBP38" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 95.000~~DDS similarity FT to overlapping ESTs:~HSU53083 Human clone 5/24 mRNA FT sequence; (258..86); 97% identity.~~R61694 yh05c11.r1 Homo FT sapiens cDNA clone 42196 5'; (194..368); 98% FT identity.~~Additional EST matches:~T08452" FT misc_feature complement(18649026..18649243) FT /gene="FKBP38" FT /note="DDS similarity to overlapping ESTs:~(30299..30181) FT F06416|HSC17E071 H. sapiens partial cDNA sequence; clone FT c-17e07; (243..361); 98% identity.~~(30273..30082) FT HSU53083 Human clone 5/24 mRNA sequence; (458..259); 85% FT identity.~~(30276..30082) R61694 yh05c11.r1 Homo sapiens FT cDNA clone 42196 5'; (1..193); 97% identity.~~Additional FT EST matches:~T08452" FT repeat_region complement(18649457..18649624) FT /rpt_family="AluJo" FT repeat_region complement(18649625..18649923) FT /rpt_family="AluY" FT repeat_region complement(18649924..18650068) FT /rpt_family="AluJo" FT misc_feature complement(18650181..18650269) FT /gene="FKBP38" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(31325..31237) FT F06416|HSC17E071 H. sapiens partial cDNA sequence; clone FT c-17e07; (154..242); 98% identity.~~(31325..31269) M62106 FT EST00165 Homo sapiens cDNA clone HHCJ35; (334..390); 95% FT identity.~~Additional EST matches:~T08452" FT misc_feature complement(18650361..18650530) FT /gene="FKBP38" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~M62106 EST00165 Homo FT sapiens cDNA clone HHCJ35; (164..333); 99% FT identity.~~(31571..31417) F06416|HSC17E071 H. sapiens FT partial cDNA sequence; clone c-17e07; (1..153); 97% FT identity.~~Additional EST matches:~T08452, Z44717, T09208" FT repeat_region complement(18650796..18650823) FT /rpt_family="POLY_A" FT repeat_region 18651139..18651346 FT /rpt_family="AluJo" FT repeat_region 18651400..18651697 FT /rpt_family="AluSx" FT repeat_region complement(18651706..18651827) FT /rpt_family="(TAA)n" FT repeat_region complement(18652081..18652131) FT /rpt_family="7SLRNA" FT repeat_region 18652223..18652296 FT /rpt_family="MIR" FT misc_feature complement(18652443..18652805) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 89.000~~DDS similarity FT to overlapping ESTs:~(33707..33545) M62106 EST00165 Homo FT sapiens cDNA clone HHCJ35; (1..163); 100% FT identity.~~(33876..33560) H16612 ym26b04.r1 Homo sapiens FT cDNA clone 49255 5' similar to contains MSR1 repetitive FT element; (33..334); 98% identity.~~Additional EST FT matches:~T09208, D31343" FT repeat_region complement(18652638..18652700) FT /rpt_family="(GGA)n" FT repeat_region 18652900..18653046 FT /rpt_family="MIR" FT repeat_region complement(18653042..18653194) FT /rpt_family="MIR" FT repeat_region complement(18654109..18654228) FT /rpt_family="(CGGG)n" FT repeat_region complement(18654328..18654440) FT /rpt_family="(CGG)n" FT repeat_region complement(18654538..18654595) FT /rpt_family="GC_rich" FT repeat_region 18654656..18654694 FT /rpt_family="MIR" FT repeat_region 18655295..18655349 FT /rpt_family="(TGGA)n" FT repeat_region complement(18655560..18655854) FT /rpt_family="AluSp" FT repeat_region complement(18655866..18656127) FT /rpt_family="AluSc" FT repeat_region complement(18656150..18656310) FT /rpt_family="AluJ" FT repeat_region complement(18656311..18656608) FT /rpt_family="AluY" FT repeat_region complement(18656610..18656736) FT /rpt_family="AluJ" FT repeat_region 18656938..18657167 FT /rpt_family="AluSx" FT repeat_region 18657186..18657416 FT /rpt_family="AluSx" FT repeat_region complement(18657471..18657622) FT /rpt_family="AluSg/x" FT repeat_region complement(18657623..18657907) FT /rpt_family="AluSg" FT repeat_region 18657927..18658068 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(18658069..18658113) FT /rpt_family="AT_rich" FT repeat_region complement(18658190..18658426) FT /rpt_family="AluSg" FT repeat_region 18658433..18658471 FT /rpt_family="(CAAAA)n" FT repeat_region complement(18658541..18658833) FT /rpt_family="AluSx" FT repeat_region 18658926..18659220 FT /rpt_family="AluSc" FT repeat_region complement(18659250..18659553) FT /rpt_family="AluJo" FT repeat_region complement(18659558..18659634) FT /rpt_family="L1M4" FT repeat_region complement(18659652..18659730) FT /rpt_family="AluSc" FT repeat_region 18659698..18659770 FT /rpt_family="AluSp/q" FT repeat_region 18660050..18660346 FT /rpt_family="AluSx" FT repeat_region 18660366..18660659 FT /rpt_family="AluSg" FT repeat_region 18660688..18660986 FT /rpt_family="AluSg" FT repeat_region 18660997..18661291 FT /rpt_family="AluSx" FT repeat_region 18661298..18661600 FT /rpt_family="AluYa5" FT repeat_region 18661616..18661914 FT /rpt_family="AluSg" FT repeat_region 18661968..18662265 FT /rpt_family="AluY" FT repeat_region complement(18662286..18662546) FT /rpt_family="AluJo" FT repeat_region 18663047..18663347 FT /rpt_family="AluSp" FT repeat_region 18663366..18663661 FT /rpt_family="AluSp" FT repeat_region 18663670..18663962 FT /rpt_family="AluSq" FT repeat_region complement(18663998..18664169) FT /rpt_family="AluJb" FT repeat_region complement(18664170..18664468) FT /rpt_family="AluSg" FT repeat_region complement(18664492..18664769) FT /rpt_family="AluSx" FT repeat_region complement(18664770..18664911) FT /rpt_family="AluJb" FT repeat_region complement(18664919..18665082) FT /rpt_family="FRAM" FT repeat_region 18665083..18665157 FT /rpt_family="L1MD3" FT repeat_region 18665083..18665161 FT /rpt_family="L1MD3" FT repeat_region complement(18665162..18665461) FT /rpt_family="AluSx" FT repeat_region complement(18665464..18665793) FT /rpt_family="AluSx" FT repeat_region complement(18665797..18665853) FT /rpt_family="(GAAA)n" FT repeat_region complement(18665854..18666155) FT /rpt_family="AluSp" FT repeat_region complement(18666156..18666447) FT /rpt_family="AluSq" FT repeat_region 18666453..18666610 FT /rpt_family="L1MC4" FT repeat_region complement(18666621..18666919) FT /rpt_family="AluY" FT repeat_region complement(18667015..18667325) FT /rpt_family="AluSx" FT repeat_region complement(18667328..18667485) FT /rpt_family="AluSg/x" FT repeat_region complement(18667588..18667890) FT /rpt_family="AluSg" FT repeat_region 18667961..18668263 FT /rpt_family="AluSp" FT repeat_region 18668373..18668449 FT /rpt_family="MIR" FT repeat_region complement(18668778..18668840) FT /rpt_family="GC_rich" FT repeat_region complement(18669434..18669501) FT /rpt_family="MIR" FT repeat_region complement(18669793..18670089) FT /rpt_family="AluSx" FT repeat_region 18670514..18670596 FT /rpt_family="MIR" FT repeat_region complement(18670678..18670814) FT /rpt_family="(GA)n" FT repeat_region complement(18670817..18671117) FT /rpt_family="AluSx" FT repeat_region complement(18671522..18671814) FT /rpt_family="AluSg" FT repeat_region 18671931..18672062 FT /rpt_family="FLAM_C" FT repeat_region 18672083..18672381 FT /rpt_family="AluSq" FT misc_feature 18672846..18672967 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(16355..16421) W94871 FT ze09c08.s1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 358478 3'; (1..67); 94% identity.~~(16357..16421) FT W52028 zd13a07.s1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 340500 3'; (1..65); 96% FT identity.~~(16356..16421) W32524 zc06c05.s1 Soares FT parathyroid tumor NbHPA Homo sapiens cDNA clone 321512 3'; FT (1..66); 93% identity.~~Additional EST matches:~W84343" FT CDS join(<18672846..18672967,18675679..18675831, FT 18677942..18677988,18679212..18679441) FT /codon_start=1 FT /product="R26445_1" FT /note="Hypothetical partial human protein most similar to FT hypothetical protein encoded by U97006 [Caenorhabditis FT elegans]" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC25583.1" FT /translation="AAEEEKEMDLPDSASRVFCGRILSMVNTDDVNAIILAQKNMLDRF FT EKTNEMLLNFNNLSSARLQQMSERFLHHTRTLVEMKRDLDSIFRRIRTLKGKLARQHPE FT AFSHIPEASFLEEEDEDPIPPSTTTTIATSEQSTGSCDTSPDTVSPSLSPGFEDLSHVQ FT PGSPAINGRSQTDDEEMTGE" FT repeat_region complement(18673268..18673571) FT /rpt_family="AluSp" FT repeat_region complement(18673768..18673982) FT /rpt_family="MER30" FT repeat_region complement(18674155..18674322) FT /rpt_family="AluSx" FT repeat_region complement(18674323..18674611) FT /rpt_family="AluSc" FT repeat_region complement(18674612..18674701) FT /rpt_family="AluSx" FT repeat_region complement(18674702..18674993) FT /rpt_family="AluSg" FT repeat_region 18675150..18675439 FT /rpt_family="AluY" FT misc_feature 18675679..18675831 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~W94871 ze09c08.s1 Soares FT fetal heart NbHH19W Homo sapiens cDNA clone 358478 3'; FT (68..219); 99% identity.~~W52028 zd13a07.s1 Soares fetal FT heart NbHH19W Homo sapiens cDNA clone 340500 3'; (66..217); FT 99% identity.~~W32524 zc06c05.s1 Soares parathyroid tumor FT NbHPA Homo sapiens cDNA clone 321512 3'; (67..218); 99% FT identity.~~Additional EST matches:~W84343" FT misc_feature 18675680..18675832 FT /note="BLASTX similarity to 1938460 (60..110); match: 0.45, FT score: 1.6e-07; database searched: nr; ( ) No definition FT line found [Caenorhabditis elegans]" FT repeat_region complement(18676041..18676341) FT /rpt_family="AluY" FT repeat_region complement(18676342..18676496) FT /rpt_family="AluSx" FT repeat_region complement(18676497..18676784) FT /rpt_family="AluSx" FT repeat_region complement(18676803..18676940) FT /rpt_family="AluSx" FT repeat_region 18676979..18677284 FT /rpt_family="AluY" FT repeat_region 18677319..18677618 FT /rpt_family="AluSx" FT misc_feature 18677942..18677988 FT /note="DDS similarity to overlapping ESTs:~W94871 FT ze09c08.s1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 358478 3'; (220..267); 100% identity.~~W52028 FT zd13a07.s1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 340500 3'; (218..264); 100% identity.~~W32524 FT zc06c05.s1 Soares parathyroid tumor NbHPA Homo sapiens cDNA FT clone 321512 3'; (219..265); 100% identity.~~Additional EST FT matches:~W84343" FT repeat_region 18678797..18679093 FT /rpt_family="AluSp" FT misc_feature 18679212..18680171 FT /note="(22666..22895) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 87.000~~DDS similarity to overlapping ESTs:~(22666..22882) FT W94871 ze09c08.s1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 358478 3'; (267..485); 98% FT identity.~~(22666..22996) W52028 zd13a07.s1 Soares fetal FT heart NbHH19W Homo sapiens cDNA clone 340500 3'; FT (265..590); 94% identity.~~(22666..22846) W32524 zc06c05.s1 FT Soares parathyroid tumor NbHPA Homo sapiens cDNA clone FT 321512 3'; (266..447); 99% identity.~~(22868..23303) C16627 FT Human placenta cDNA 5'-end GEN-504H10; Score: 842 FT Identity: 431/434 (99%).~~(23625..23031) W52761 zd13a07.r1 FT Soares fetal heart NbHH19W Homo sapiens cDNA clone 340500 FT 5'; Score: 1076 Identity: 582/597 (97%). ~~Additional EST FT matches:~W84343, N24383, AA056616, W78018, T16453, F16117, FT Z45452, AI027431, AI003556, AI031577, AI042117, and many FT others..." FT repeat_region 18680562..18680858 FT /rpt_family="AluSq" FT repeat_region complement(18681011..18681308) FT /rpt_family="AluJo" FT repeat_region complement(18681321..18681496) FT /rpt_family="AluSg/x" FT repeat_region complement(18681498..18681785) FT /rpt_family="AluSp" FT repeat_region 18681847..18682140 FT /rpt_family="AluSp" FT gene 18682146..18685960 FT /gene="UBA52" FT /note="Ubiquitin-52 amino acid fusion protein gene" FT misc_feature 18682680..18682719 FT /gene="UBA52" FT /note="DDS similarity to W03001 za02g04.r1 Soares FT melanocyte 2NbHM Homo sapiens cDNA clone 291414 5' similar FT to gb:Y00361 60S RIBOSOMAL PROTEIN (HUMAN); (1..40); 90% FT identity." FT misc_feature 18683008..18683111 FT /gene="UBA52" FT /note="BLASTN similarity to Z57470 (1..104); match: 1, FT score: 1.1e-34; database searched: nt; H.sapiens CpG DNA, FT clone 179a1, forward read cpg179a1.ft1a ." FT repeat_region complement(18683145..18683439) FT /rpt_family="AluSx" FT misc_feature 18684103..18684213 FT /gene="UBA52" FT /note="DDS similarity to overlapping ESTs:~W03001 FT za02g04.r1 Soares melanocyte 2NbHM Homo sapiens cDNA clone FT 291414 5' similar to gb:Y00361 60S RIBOSOMAL PROTEIN FT (HUMAN); (41..151); 95% identity.~~N36269 yx98c09.r1 Homo FT sapiens cDNA clone 269776 5' similar to gb:Y00361 60S FT RIBOSOMAL PROTEIN (HUMAN); (1..127); 91% identity.~~W49585 FT zc42f10.s1 Soares senescent fibroblasts NbHSF Homo sapiens FT cDNA clone 325003 3' similar to gb:Y00361 60S RIBOSOMAL FT PROTEIN (HUMAN); (493..368); 92% identity.~~Additional EST FT matches: ~T47040~~(27557..27671) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: excellent, score: FT 100.000" FT CDS join(18684111..18684213,18684472..18684558, FT 18685680..18685782,18685867..18685960) FT /codon_start=1 FT /gene="UBA52" FT /product="ubiquitin-52 amino acid fusion protein" FT /note="ubiquitin / ribosomal protein CEP52" FT /protein_id="AAC25582.1" FT /translation="MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF FT AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLH FT PRAVNCRKKKCGHTNNLRPKKKVK" FT misc_feature 18684472..18684601 FT /gene="UBA52" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 96.000~~DDS similarity FT to overlapping ESTs:~W03001 za02g04.r1 Soares melanocyte FT 2NbHM Homo sapiens cDNA clone 291414 5' similar to FT gb:Y00361 60S RIBOSOMAL PROTEIN (HUMAN); (152..238); 100% FT identity.~~N36269 yx98c09.r1 Homo sapiens cDNA clone 269776 FT 5' similar to gb:Y00361 60S RIBOSOMAL PROTEIN (HUMAN); FT (128..214); 100% identity.~~W49585 zc42f10.s1 Soares FT senescent fibroblasts NbHSF Homo sapiens cDNA clone 325003 FT 3' similar to gb:Y00361 60S RIBOSOMAL PROTEIN (HUMAN); FT (367..281); 100% identity.~~Additional EST matches:~T47040" FT repeat_region 18684815..18685025 FT /rpt_family="AluSc" FT repeat_region complement(18685113..18685321) FT /rpt_family="AluSg/x" FT misc_feature 18685680..18685782 FT /gene="UBA52" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 96.000~~DDS similarity FT to overlapping ESTs:~W03001 za02g04.r1 Soares melanocyte FT 2NbHM Homo sapiens cDNA clone 291414 5' similar to FT gb:Y00361 60S RIBOSOMAL PROTEIN (HUMAN); (239..341); 100% FT identity.~~N36269 yx98c09.r1 Homo sapiens cDNA clone 269776 FT 5' similar to gb:Y00361 60S RIBOSOMAL PROTEIN (HUMAN); FT (215..317); 100% identity.~~W49585 zc42f10.s1 Soares FT senescent fibroblasts NbHSF Homo sapiens cDNA clone 325003 FT 3' similar to gb:Y00361 60S RIBOSOMAL PROTEIN (HUMAN); FT (280..178); 100% identity.~~Additional EST FT matches:~AA987342, AI027257, T28411" FT misc_feature 18685867..18685960 FT /gene="UBA52" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 91.000~~DDS similarity FT to overlapping ESTs:~W03001 za02g04.r1 Soares melanocyte FT 2NbHM Homo sapiens cDNA clone 291414 5' similar to FT gb:Y00361 60S RIBOSOMAL PROTEIN (HUMAN); (342..523);90% FT identity.~~N36269 yx98c09.r1 Homo sapiens cDNA clone 269776 FT 5' similar to gb:Y00361 60S RIBOSOMAL PROTEIN (HUMAN); FT (318..474); 98% identity.~~W49585 zc42f10.s1 Soares FT senescent fibroblasts NbHSF Homo sapiens cDNA clone 325003 FT 3' similar to gb:Y00361 60S RIBOSOMAL PROTEIN (HUMAN); FT (177..6);98% identity.~~Additional EST matches:~AA987342, FT AI027257, AI001191, T28411~~" FT repeat_region complement(18686403..18686533) FT /rpt_family="FLAM_C" FT repeat_region complement(18686555..18686855) FT /rpt_family="AluY" FT repeat_region complement(18686870..18686934) FT /rpt_family="tRNA-Cys-TGC" FT repeat_region complement(18686987..18687135) FT /rpt_family="AluJo" FT repeat_region complement(18687241..18687449) FT /rpt_family="AluJo" FT repeat_region complement(18687472..18687777) FT /rpt_family="AluSq" FT repeat_region complement(18687793..18687909) FT /rpt_family="AluJo" FT misc_feature 18687933..18687980 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 89.000" FT misc_feature complement(18688059..18688186) FT /note="BLASTN similarity to Z20793 (1..128); match: 0.97, FT score: 1.0e-46; database searched: est; H. sapiens FT putatively transcribed partial sequence, UK-HGMP sequence FT ID AAACWNE" FT repeat_region 18688129..18688382 FT /rpt_family="LTR12" FT repeat_region 18688401..18688863 FT /rpt_family="HERV17" FT repeat_region complement(18688927..18689224) FT /rpt_family="AluSg" FT misc_feature 18689247..18689318 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 78.000" FT repeat_region 18690018..18692428 FT /rpt_family="HERV9" FT repeat_region complement(18692430..18692706) FT /rpt_family="AluY" FT repeat_region 18692713..18694586 FT /rpt_family="HERV17" FT repeat_region 18694587..18694884 FT /rpt_family="AluY" FT repeat_region 18694885..18695495 FT /rpt_family="HERV9" FT repeat_region complement(18695648..18695934) FT /rpt_family="AluYa5" FT LTR 18691419..18697678 FT /standard_name="endogenous retroviral sequence" FT /note="HERV9 retroviral sequence" FT repeat_region complement(18696667..18696945) FT /rpt_family="Alu" FT repeat_region 18698113..18698416 FT /rpt_family="Alu" FT repeat_region 18698520..18698697 FT /rpt_family="LTR12" FT misc_feature complement(18698607..18698667) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 63.000" FT misc_feature complement(18698791..18698834) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 75.000" FT repeat_region complement(18699090..18699285) FT /rpt_family="Alu" FT misc_feature 18699571..18699710 FT /note="DDS similarity to AA047548 zf15e02.r1 Soares fetal FT heart NbHH19W Homo sapiens cDNA clone 377018 5' (1..138); FT 96% identity.~~Other overlapping matches:~(10435..10548) FT DDS similarity to AA136115 zk90b04.r1 Soares pregnant FT uterus NbHPU Homo sapiens cDNA clone 490063 5' (1..110); FT 93% identity.~~(10466..10548) DDS similarity to AA452628 FT zx33f04.r1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 788287 5' (1..82); 95% identity.~~(10486..10548) DDS FT similarity to AA009412 ze82h02.r1 Soares fetal heart FT NbHH19W Homo sapiens cDNA clone 365523 5' (1..61); 97% FT identity." FT misc_feature 18699805..18699887 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to AA047548 zf15e02.r1 Soares fetal heart FT NbHH19W Homo sapiens cDNA clone 377018 5' (139..221); 100% FT identity.~~DDS similarity to AA136115 zk90b04.r1 Soares FT pregnant uterus NbHPU Homo sapiens cDNA clone 490063 5' FT (111..192); 99% identity.~~DDS similarity to AA452628 FT zx33f04.r1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 788287 5' (83..165); 100% identity.~~DDS similarity FT to AA009412 ze82h02.r1 Soares fetal heart NbHH19W Homo FT sapiens cDNA clone 365523 5' (62..144); 100% identity." FT misc_feature 18700289..18700493 FT /note="DDS similarity to AA136115 zk90b04.r1 Soares FT pregnant uterus NbHPU Homo sapiens cDNA clone 490063 5' FT (193..394); 94% identity.~~DDS similarity to AA009412 FT ze82h02.r1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 365523 5' (145..346); 96% identity.~~(11121..11331) FT DDS similarity to AA009693 ze82h02.s1 Soares fetal heart FT NbHH19W Homo sapiens cDNA clone 365523 3' (429..307); 95% FT identity.~~~(11127..11246) DDS similarity to AA047548 FT zf15e02.r1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 377018 5' (222..341); 97% identity.~~(11061..11331) FT predicted exon, program: grail2exons_human_1.3, frame: 0, FT quality: good, score: 73.000~~(11061..11209) DDS similarity FT to AA452628 zx33f04.r1 Soares total fetus Nb2HF8 9w Homo FT sapiens cDNA clone 788287 5' (167..313); 98% identity." FT repeat_region complement(18701031..18701323) FT /rpt_family="Alu" FT misc_feature 18701664..18701743 FT /note="DDS similarity to AA136115 zk90b04.r1 Soares FT pregnant uterus NbHPU Homo sapiens cDNA clone 490063 5' FT (395..477); 92% identity.~~DDS similarity to AA009412 FT ze82h02.r1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 365523 5' (347..427); 94% identity.~~DDS similarity FT to AA009693 ze82h02.s1 Soares fetal heart NbHH19W Homo FT sapiens cDNA clone 365523 3' (306..228); 99% identity.~~DDS FT similarity to AA450010 zx33f04.s1 Soares total fetus Nb2HF8 FT 9w Homo sapiens cDNA clone 788287 3' (309..229); 99% FT identity.~" FT repeat_region complement(18702128..18702402) FT /rpt_family="Alu" FT repeat_region complement(18702436..18702693) FT /rpt_family="Alu" FT misc_feature complement(18702918..18703191) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 61.000~~Other overlapping FT matches:~(13756..13826) DDS similarity to AA009412 FT ze82h02.r1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 365523 5' (428..496); 97% identity.~~(13756..13984) FT DDS similarity to AA009693 ze82h02.s1 Soares fetal heart FT NbHH19W Homo sapiens cDNA clone 365523 3' (227..1); 98% FT identity.~~(13756..13984) DDS similarity to AA450010 FT zx33f04.s1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 788287 3' (228..1); 99% identity.~" FT repeat_region complement(18703262..18703834) FT /rpt_family="Alu" FT misc_feature 18704047..18704479 FT /note="DDS similarity to AA406406 zv11e07.s1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 753348 3' (1..433); Score: 858 FT Identity: 431/433 (99%).~~~(14884..15237) DDS similarity to FT W37175 zb21a02.r1 Soares fetal lung NbHL19W Homo sapiens FT cDNA clone 302666 5' (1..355); 94% FT identity.~~(15227..14885) DDS similarity to AA121532 FT zk89c11.s1 Soares pregnant uterus NbHPU Homo sapiens cDNA FT clone 490004 3' (342..1); 99% identity.~~(15227..14885) DDS FT similarity to AA127694 zk89c11.r1 Soares pregnant uterus FT NbHPU Homo sapiens cDNA clone 490004 5' (126..467); 99% FT identity.~~(15227..14897) DDS similarity to W46603 FT zc32h10.r1 Soares senescent fibroblasts NbHSF Homo sapiens FT cDNA clone 324067 5 (328..1); 98% identity.~~(15227..15088) FT DDS similarity to W46604 zc32h10.s1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 324067 3' FT (322..465); 96% identity." FT misc_feature 18704875..18704922 FT /note="DDS similarity to AA121532 zk89c11.s1 Soares FT pregnant uterus NbHPU Homo sapiens cDNA clone 490004 3' FT (389..343); 99% identity.~~DDS similarity to AA127694 FT zk89c11.r1 Soares pregnant uterus NbHPU Homo sapiens cDNA FT clone 490004 5' (77..125); 90% identity.~~(15735..15713) FT DDS similarity to W46603 zc32h10.r1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 324067 5' FT (351..329); 100% identity.~~(15735..15713) DDS similarity FT to W46604 zc32h10.s1 Soares senescent fibroblasts NbHSF FT Homo sapiens cDNA clone 324067 3' (299..321); 100% FT identity." FT misc_feature complement(18705057..18705244) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 81.000~~Other FT overlapping matches:~(15936..15895) DDS similarity to FT AA121532 zk89c11.s1 Soares pregnant uterus NbHPU Homo FT sapiens cDNA clone 490004 3' (431..390); 100% FT identity.~~(15970..15895) DDS similarity toAA127694 FT zk89c11.r1 Soares pregnant uterus NbHPU Homo sapiens cDNA FT clone 490004 5' (1..76); 100% identity." FT repeat_region 18707088..18707352 FT /rpt_family="Alu" FT misc_feature complement(18707432..18707600) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: FT 100.000~~(18438..18284) DDS similarity to W66776 me17b11.r1 FT Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA clone FT 387741 5' similar to PIR:B38252 B38252 granulocyte FT colony-stimulating factor receptor precursor (157..1); 82% FT identity.~~(18438..18406) DDS similarity to |AA049280 FT mj45d02.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus FT cDNA clone 479043 5' similar to SW:IL6B_MOUSE Q00560 FT INTERLEUKIN-6 RECEPTOR BETA PRECURSOSR (432..464); 88% FT identity." FT misc_feature complement(18707702..18707859) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to W66776 me17b11.r1 Soares mouse embryo FT NbME13.5 14.5 Mus musculus cDNA clone 387741 5' similar to FT PIR:B38252 B38252 granulocyte colony-stimulating factor FT receptor precursor (316..158); 92% identity.~~DDS FT similarity to AA049280 mj45d02.r1 Soares mouse embryo FT NbME13.5 14.5 Mus musculus cDNA clone 479043 5' similar to FT SW:IL6B_MOUSE Q00560 INTERLEUKIN-6 RECEPTOR BETA CHAIN FT PRECURSOR (274..431); 93% identity.~~" FT repeat_region complement(18708242..18708541) FT /rpt_family="Alu" FT misc_feature complement(18709242..18709411) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to AA049280 mj45d02.r1 Soares mouse embryo FT NbME13.5 14.5 Mus musculus cDNA clone 479043 5' similar to FT SW:IL6B_MOUSE Q00560 INTERLEUKIN-6 RECEPTOR BETA CHAIN FT PRECURSOR (104..273); 86% identity.~~~(20245..20080) DDS FT similarity to W66776 me17b11.r1 Soares mouse embryo FT NbME13.5 14.5 Mus musculus cDNA clone 387741 5' similar to FT PIR:B38252 B38252 granulocyte colony-stimulating factor FT receptor precursor (482..317); 86% identity." FT misc_feature complement(18709582..18709711) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: FT 100.000~~(20522..20420) DDS similarity to AA049280 FT mj45d02.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus FT cDNA clone 479043 5' similar to SW:IL6B_MOUSE Q00560 FT INTERLEUKIN-6 RECEPTOR BETA CHAIN PRECURSOR ~(1..103); 85% FT identity.~~(20549..20479) DDS similarity to AA042914 FT zk56f01.s1 Soares pregnant uterus NbHPU Homo sapiens cDNA FT clone 486841 3' (338..410); 96% identity.~" FT repeat_region complement(18709941..18710205) FT /rpt_family="Alu" FT misc_feature complement(18710371..18710656) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 94.000~~Other FT overlapping matches:~(21494..21213) DDS similarity to FT AA042914 zk56f01.s1 Soares pregnant uterus NbHPU Homo FT sapiens cDNA clone 486841 3' (55..337); 99% FT identity.~(21362..21268) DDS similarity to W46603 FT zc32h10.r1 Soares senescent fibroblasts NbHSF Homo sapiens FT cDNA clone 324067 5' (448..352); 97% FT identity.~~(21494..21268) DDS similarity to W46604 FT zc32h10.s1 Soares senescent fibroblasts NbHSF Homo sapiens FT cDNA clone 324067 3' (73..298); 99% identity." FT repeat_region complement(18711016..18711927) FT /rpt_family="Alu" FT repeat_region complement(18712090..18712498) FT /rpt_family="Alu" FT repeat_region 18713145..18713442 FT /rpt_family="Alu" FT repeat_region complement(18713594..18713820) FT /rpt_family="Alu" FT misc_feature complement(18721812..18721858) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 74.000" FT misc_feature 18723874..18723939 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 69.000" FT misc_feature 18724682..18724826 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~Other FT overlapping matches:~(35559..35664) DDS similarity to FT R59871 yh07c12.r1 Homo sapiens cDNA clone 42571 5' FT (1..107); 94% identity.~~(35575..35664) DDS similarity to FT R89669 ym97f05.r1 Homo sapiens cDNA clone 166881 5' FT (1..90); 100% identity." FT misc_feature 18724914..18725005 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 98.000~~DDS similarity FT to 59871 yh07c12.r1 Homo sapiens cDNA clone 42571 FT 5'(108..199); 97% identity.~~DDS similarity to R89669 FT ym97f05.r1 Homo sapiens cDNA clone 166881 5' (91..181); 97% FT identity.~~DDS similarity to N99345 IMAGE:59425 Homo FT sapiens cDNA clone 59425 (17..111); 100% identity." FT repeat_region complement(18725805..18726082) FT /rpt_family="Alu" FT repeat_region complement(18726433..18726709) FT /rpt_family="Alu" FT misc_feature 18726785..18726937 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 65.000~~DDS similarity to FT 59871 yh07c12.r1 Homo sapiens cDNA clone 42571 5' FT (200..353); 99% identity.~~DDS similarity to R89669 FT ym97f05.r1 Homo sapiens cDNA clone 166881 5' (182..337); FT 98% identity.~~DDS similarity to N99345 IMAGE:59425 Homo FT sapiens cDNA clone 59425 (112..264); 100% FT identity.~~(37624..37775) DDS similarity to AA424113 FT zv80e08.r1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 759974 5' (1..152); 99% identity." FT repeat_region complement(18727191..18727501) FT /rpt_family="Alu" FT misc_feature 18727810..18727912 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 84.000~~DDS similarity FT to N99345 IMAGE:59425 Homo sapiens cDNA clone 59425 FT (265..363); 96% identity.~~DDS similarity to AA424113 FT zv80e08.r1 Soares total fetus Nb2HF8 9w Homo sapiens cDNA FT clone 759974 5' (153..254); 99% identity.~~DDS similarity FT to AA378559 EST91296 Synovial sarcoma Homo sapiens cDNA 5' FT end (23..124); 100% identity." FT misc_feature 18728965..18729082 FT /note="DDS similarity to N99345 IMAGE:59425 Homo sapiens FT cDNA clone 59425 (364..480); 99% identity.~~DDS similarity FT AA378559 EST91296 Synovial sarcoma Homo sapiens cDNA 5' end FT (125..242); 100% identity.~~(39812..39941) predicted exon, FT program: grail2exons_human_1.3, frame: 0, quality: FT excellent, score: 94.000~~(39803..39870) DDS similarity to FT AA424113 zv80e08.r1 Soares total fetus Nb2HF8 9w Homo FT sapiens cDNA clone 759974 5' (255..322); 100% identity." FT misc_feature 18729185..18729302 FT /note="DDS similarity to N99345 IMAGE:59425 Homo sapiens FT cDNA clone 59425 (481..598); 100% identity.~~DDS similarity FT to AA378559 EST91296 Synovial sarcoma Homo sapiens cDNA 5' FT end (243..308); 94% identity.~~(40023..40102) DS similarity FT to AA424113 zv80e08.r1 Soares total fetus Nb2HF8 9w Homo FT sapiens cDNA clone 759974 5' (323..402); 100% FT identity.~~(40081..40140) predicted exon, program: FT grail2exons_human_1.3, frame: 0, quality: marginal, score: FT 44.000" FT repeat_region complement(18729515..18729819) FT /rpt_family="Alu" FT repeat_region complement(18772715..18772873) FT /rpt_family="AluJb" FT repeat_region complement(18774710..18775016) FT /rpt_family="L1MB6" FT misc_feature 18775071..18775253 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~H14008 EST00034 Homo FT sapiens genomic clone D2-12 5'; (5..180); 94% FT identity.~~H14012 EST00038 Homo sapiens genomic clone D2-32 FT 5'; (5..186); 97% identity." FT repeat_region complement(18775395..18775693) FT /rpt_family="AluSg" FT repeat_region complement(18775866..18776165) FT /rpt_family="AluY" FT repeat_region complement(18776175..18776268) FT /rpt_family="LINE2" FT repeat_region complement(18777972..18778313) FT /rpt_family="AluSq" FT misc_feature 18778474..18780022 FT /note="(8951..10499) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 95.000~~DDS similarity to overlapping ESTs:~(9000..9197) FT AA252986 zr51h01.r1 Soares NhHMPu S1 Homo sapiens cDNA FT clone 666961 5'; Score: 369 Identity: 193/199 FT (96%).~~(9180..8945) AA252987 zr51h01.s1 Soares NhHMPu S1 FT Homo sapiens cDNA clone 666961 3' similar to SW:KELC_DROME FT Q04652 RING CANAL PROTEIN ; (1..234); 91% FT identity.~~(9806..10088) AA389380 mp22f03.r1 Life Tech FT mouse embryo 8 5dpc 10664019 Mus musculus cDNA clone 569981 FT 5' similar to SW:KELC_DROME Q04652 RING CANAL PROTEIN; FT Score: 298 Identity: 216/283 (76%).~~(10557..10137) FT AA024139 mh97f02.r1 Soares mouse placenta 4NbMP13.5 14.5 FT Mus musculus cDNA clone 458907 5'; Score: 504 Identity: FT 351/417 (84%).~~(10280..10450) AA504278 aa61d09.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:825425 3'; FT Score: 304 Identity: 164/169 (97%).~~(10294..10715) R17597 FT yg14g10.r1 Homo sapiens cDNA clone 32343 5'. Score: 682 FT Identity: 393/426 (92%).~~(10293..10684) R15180 yf86c10.r1 FT Homo sapiens cDNA clone 29369 5'. Score: 629 Identity: FT 364/387 (94%).~~" FT repeat_region 18778918..18778939 FT /rpt_family="GC_rich" FT misc_feature 18780435..18780743 FT /note="DDS similarity to overlapping ESTs:~(10912..11068) FT W24834 zc65g08.r1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 327230 5'; Score: 301 Identity: 155/156 FT (99%).~~(10986..11139) AA295803 EST101028 Pancreas tumor I FT Homo sapiens cDNA 5' end; Score: 304 Identity: 153/154 FT (99%).~~(10987..11220) AA295034 EST100228 Pancreas tumor I FT Homo sapiens cDNA 5' end; Score: 435 Identity: 227/233 FT (97%).~~" FT misc_feature 18780874..18781630 FT /note="DDS similarity to overlapping ESTs:~(11351..11756) FT H38487 yp69f02.r1 Homo sapiens cDNA clone 192699 5'. Score: FT 765 Identity: 397/405 (98%).~~(11789..11314) 42934 FT yg14g10.s1 Homo sapiens cDNA clone 32343 3'. Score: 795 FT Identity: 456/493 (92%).~~(11730..11423) W02776 zc65g08.s1 FT Soares fetal heart NbHH19W Homo sapiens cDNA clone 327230 FT 3'; Score: 593 Identity: 306/311 (98%).~~(11784..11445) FT N47890 yy96c11.s1 Homo sapiens cDNA clone 281396 3'. Score: FT 680 Identity: 340/340 (100%).~~(11796..11496) AA640691 FT nt70d08.s1 NCI_CGAP_Pr3 Homo sapiens cDNA clone FT IMAGE:1203855; Score: 534 Identity: 289/315 FT (91%).~~(11785..11497) T59620 yb66c05.s1 Homo sapiens cDNA FT clone 76136 3'. Score: 519 Identity: 276/290 FT (95%).~~(11779..12112) AA570797 nf22a05.s1 NCI_CGAP_Pr1 FT Homo sapiens cDNA clone IMAGE:914480 similar to contains FT Alu repetitive element; (1..334); 99% FT identity.~~(12107..11779) AA568198 nf13g06.s1 NCI_CGAP_Pr1 FT Homo sapiens cDNA clone IMAGE:913690 similar to contains FT Alu repetitive element; (330..4); 99% identity." FT repeat_region complement(18781520..18781820) FT /rpt_family="AluSx" FT repeat_region complement(18782334..18782360) FT /rpt_family="GC_rich" FT misc_feature 18782439..18782531 FT /note="DDS similarity to overlapping ESTs:~(12921..12988) FT AA570797 nf22a05.s1 NCI_CGAP_Pr1 Homo sapiens cDNA clone FT IMAGE:914480 similar to contains Alu repetitive element; FT (335..402); 100% identity.~~(13008..12916) AA568198 FT nf13g06.s1 NCI_CGAP_Pr1 Homo sapiens cDNA clone FT IMAGE:913690 similar to contains Alu repetitive element; FT (423..331); 97% identity.~" FT misc_feature 18782573..18782736 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 54.000" FT repeat_region 18782665..18782770 FT /rpt_family="(CA)n" FT repeat_region 18783765..18784019 FT /rpt_family="AluJo" FT repeat_region complement(18784075..18784368) FT /rpt_family="AluSx" FT repeat_region complement(18784378..18784513) FT /rpt_family="FLAM_C" FT repeat_region 18784560..18784863 FT /rpt_family="AluSx" FT repeat_region complement(18785101..18785131) FT /rpt_family="(GAAA)n" FT repeat_region 18785142..18785413 FT /rpt_family="AluJo" FT repeat_region complement(18785701..18785837) FT /rpt_family="MLT1F" FT repeat_region complement(18786020..18786175) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(18786188..18786488) FT /rpt_family="AluSx" FT repeat_region complement(18786943..18787050) FT /rpt_family="FLAM_C" FT repeat_region complement(18787532..18787702) FT /rpt_family="MIR" FT repeat_region complement(18787754..18787952) FT /rpt_family="AluSx" FT repeat_region 18787953..18788030 FT /rpt_family="AluSg/x" FT repeat_region complement(18788278..18788384) FT /rpt_family="LINE2" FT repeat_region complement(18788429..18788730) FT /rpt_family="AluSx" FT repeat_region 18789324..18789620 FT /rpt_family="AluSx" FT repeat_region 18789621..18789799 FT /rpt_family="AluSg/x" FT repeat_region complement(18789895..18790194) FT /rpt_family="AluSp" FT repeat_region 18790355..18790656 FT /rpt_family="AluSx" FT repeat_region 18790767..18791064 FT /rpt_family="AluJb" FT repeat_region complement(18791167..18791426) FT /rpt_family="AluSx" FT repeat_region complement(18791478..18791776) FT /rpt_family="AluSx" FT repeat_region complement(18791790..18792088) FT /rpt_family="AluJo" FT repeat_region 18792359..18792656 FT /rpt_family="AluSq" FT repeat_region 18792663..18792832 FT /rpt_family="AluSg/x" FT repeat_region complement(18792875..18792896) FT /rpt_family="AT_rich" FT repeat_region 18793396..18793695 FT /rpt_family="AluSq" FT misc_feature 18793710..18793969 FT /note="BLASTN similarity to Z64221 (1..260); match: 0.94, FT score: 3.9e-92; database searched: nt; H.sapiens CpG DNA, FT clone 99d1, reverse read cpg99d1.rt1a ." FT repeat_region 18793848..18794025 FT /rpt_family="LINE2" FT repeat_region 18794298..18794413 FT /rpt_family="(CG)n" FT repeat_region 18794331..18794435 FT /rpt_family="SUBTEL_sat" FT repeat_region 18794450..18794505 FT /rpt_family="(GGA)n" FT misc_feature 18794513..18794638 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 91.000" FT repeat_region 18794668..18794766 FT /rpt_family="POLY_G" FT repeat_region 18796186..18796487 FT /rpt_family="AluSq" FT repeat_region complement(18796744..18797159) FT /rpt_family="L1MB6" FT repeat_region 18797176..18797475 FT /rpt_family="AluSx" FT repeat_region 18797627..18797821 FT /rpt_family="MER20" FT repeat_region complement(18797824..18798133) FT /rpt_family="AluSx" FT misc_feature complement(18798401..18798550) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 71.000" FT repeat_region 18798750..18798815 FT /rpt_family="MIR" FT repeat_region complement(18799249..18799547) FT /rpt_family="AluSx" FT repeat_region complement(18799563..18799748) FT /rpt_family="L1MB7" FT repeat_region complement(18799755..18800056) FT /rpt_family="AluSx" FT repeat_region complement(18800058..18800226) FT /rpt_family="L1MB7" FT repeat_region 18800258..18800365 FT /rpt_family="AluSg/x" FT repeat_region complement(18800391..18800481) FT /rpt_family="L1MB4" FT repeat_region complement(18800508..18800714) FT /rpt_family="L1MB7" FT repeat_region complement(18800778..18800911) FT /rpt_family="LINE2" FT repeat_region 18801374..18801548 FT /rpt_family="MLT1C" FT repeat_region 18801554..18801855 FT /rpt_family="AluY" FT repeat_region 18801858..18802021 FT /rpt_family="AluJo/FRAM" FT repeat_region 18802044..18802351 FT /rpt_family="AluJo" FT repeat_region 18802352..18802522 FT /rpt_family="MLT1C" FT repeat_region complement(18802523..18802822) FT /rpt_family="AluSx" FT repeat_region complement(18803156..18803219) FT /rpt_family="MLT1F" FT repeat_region 18803221..18803430 FT /rpt_family="AluSp" FT repeat_region 18803604..18803904 FT /rpt_family="AluY" FT repeat_region 18803919..18804210 FT /rpt_family="AluSg" FT repeat_region complement(18804290..18804589) FT /rpt_family="AluY" FT repeat_region 18804666..18804962 FT /rpt_family="AluSx" FT repeat_region 18804963..18805127 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(18805222..18805290) FT /rpt_family="MER58A" FT repeat_region complement(18805304..18805544) FT /rpt_family="AluJo" FT repeat_region complement(18805702..18805979) FT /rpt_family="AluSx" FT repeat_region complement(18805980..18806114) FT /rpt_family="AluSg" FT repeat_region 18806256..18806392 FT /rpt_family="MER20" FT repeat_region 18806394..18806694 FT /rpt_family="AluY" FT repeat_region 18806699..18806782 FT /rpt_family="MER20" FT repeat_region complement(18807248..18807407) FT /rpt_family="MIR" FT repeat_region complement(18808169..18808419) FT /rpt_family="AluSx" FT misc_feature complement(18808826..18808961) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 61.000" FT misc_feature complement(18809337..18809791) FT /note="DDS similarity to AA252697 zq43h03.r1 Stratagene hNT FT neuron (#937233) Homo sapiens cDNA clone 632501 5';~Score: FT 897 Identity: 453/454 (99%)." FT repeat_region complement(18810547..18810748) FT /rpt_family="LINE2" FT repeat_region complement(18811306..18811339) FT /rpt_family="AT_rich" FT repeat_region 18812085..18812217 FT /rpt_family="MIR" FT repeat_region complement(18812415..18812723) FT /rpt_family="AluSx" FT repeat_region complement(18812733..18813031) FT /rpt_family="AluSp" FT repeat_region complement(18813033..18813308) FT /rpt_family="AluJo" FT repeat_region complement(18813342..18813620) FT /rpt_family="AluSp" FT repeat_region complement(18813762..18814022) FT /rpt_family="AluYb8" FT repeat_region complement(18814027..18814142) FT /rpt_family="AluY" FT repeat_region complement(18814146..18814198) FT /rpt_family="L1MD3" FT repeat_region complement(18814268..18814571) FT /rpt_family="AluSx" FT repeat_region complement(18814572..18814706) FT /rpt_family="AluSq/x" FT repeat_region complement(18814708..18814913) FT /rpt_family="L1MC4" FT repeat_region complement(18814932..18815198) FT /rpt_family="AluJo" FT repeat_region 18815240..18815541 FT /rpt_family="AluSx" FT repeat_region complement(18815544..18816134) FT /rpt_family="L1MB3" FT misc_feature 18815766..18815826 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 70.000" FT repeat_region complement(18816136..18816428) FT /rpt_family="AluSx" FT repeat_region complement(18816432..18816579) FT /rpt_family="L1MB3" FT repeat_region complement(18816642..18816811) FT /rpt_family="L1MB3" FT repeat_region complement(18816846..18817007) FT /rpt_family="L1" FT repeat_region complement(18817013..18817316) FT /rpt_family="AluSx" FT repeat_region complement(18817317..18817531) FT /rpt_family="L1" FT repeat_region complement(18817528..18818502) FT /rpt_family="L1M4" FT repeat_region 18818523..18818656 FT /rpt_family="AluJb" FT repeat_region 18818672..18818747 FT /rpt_family="MIR" FT repeat_region 18820649..18820776 FT /rpt_family="LINE2" FT repeat_region 18820824..18820940 FT /rpt_family="LINE2" FT repeat_region complement(18821420..18821725) FT /rpt_family="AluSx" FT repeat_region complement(18822762..18823055) FT /rpt_family="AluJo" FT repeat_region complement(18823067..18823369) FT /rpt_family="AluSx" FT repeat_region complement(18823372..18823479) FT /rpt_family="L1MB5" FT repeat_region 18823489..18823784 FT /rpt_family="AluSx" FT repeat_region complement(18823789..18824284) FT /rpt_family="L1MB7" FT misc_feature 18824609..18824692 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 52.000" FT repeat_region complement(18825123..18825415) FT /rpt_family="AluSg" FT repeat_region complement(18825781..18826036) FT /rpt_family="MLT1C" FT repeat_region complement(18826039..18826205) FT /rpt_family="AluSg/x" FT repeat_region complement(18826211..18826365) FT /rpt_family="MLT1C" FT repeat_region complement(18827066..18827359) FT /rpt_family="AluSg" FT repeat_region complement(18827580..18827657) FT /rpt_family="LINE2" FT misc_feature 18827608..18827689 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 76.000" FT repeat_region complement(18827773..18827923) FT /rpt_family="(CA)n" FT repeat_region complement(18828807..18829146) FT /rpt_family="L1MB5" FT repeat_region complement(18829147..18829452) FT /rpt_family="AluJb" FT repeat_region complement(18829453..18829680) FT /rpt_family="L1MB5" FT misc_feature complement(18830655..18830752) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 79.000" FT repeat_region complement(18830974..18831152) FT /rpt_family="AluSx" FT repeat_region complement(18831160..18831475) FT /rpt_family="AluY" FT repeat_region complement(18831476..18831610) FT /rpt_family="AluSx" FT repeat_region complement(18831728..18832001) FT /rpt_family="MLT1C" FT repeat_region complement(18832002..18832302) FT /rpt_family="AluY" FT repeat_region complement(18832303..18832603) FT /rpt_family="AluJo" FT repeat_region complement(18832609..18832701) FT /rpt_family="MLT1C" FT repeat_region 18833134..18833418 FT /rpt_family="MLT1C" FT repeat_region complement(18833419..18833755) FT /rpt_family="L1MB5" FT repeat_region complement(18833757..18834054) FT /rpt_family="AluSx" FT repeat_region complement(18834058..18834112) FT /rpt_family="L1MB5" FT repeat_region complement(18835245..18835683) FT /rpt_family="MLT1C" FT repeat_region 18837294..18837451 FT /rpt_family="MLT1C" FT repeat_region 18837456..18837759 FT /rpt_family="AluSg" FT repeat_region 18837775..18838076 FT /rpt_family="AluJo" FT repeat_region 18838110..18838410 FT /rpt_family="AluY" FT repeat_region 18838418..18838519 FT /rpt_family="MLT1B" FT repeat_region complement(18838530..18838835) FT /rpt_family="AluSx" FT repeat_region 18838852..18838938 FT /rpt_family="MLT1B" FT repeat_region complement(18839316..18839625) FT /rpt_family="AluSq" FT repeat_region complement(18839626..18839922) FT /rpt_family="AluSx" FT repeat_region 18839954..18840255 FT /rpt_family="AluY" FT repeat_region 18840273..18840570 FT /rpt_family="AluJb" FT repeat_region complement(18841758..18841792) FT /rpt_family="(GGGA)n" FT repeat_region complement(18841793..18841967) FT /rpt_family="AluJb" FT repeat_region complement(18841969..18842375) FT /rpt_family="MLT1C" FT repeat_region 18842966..18843359 FT /rpt_family="MLT1A2" FT repeat_region 18843619..18843911 FT /rpt_family="AluJo" FT repeat_region 18844566..18844639 FT /rpt_family="L1" FT repeat_region 18844644..18844923 FT /rpt_family="AluSx" FT repeat_region 18844925..18845151 FT /rpt_family="L1MB6" FT repeat_region 18845228..18845507 FT /rpt_family="AluJo" FT repeat_region 18848366..18848434 FT /rpt_family="MLT1C" FT repeat_region 18848435..18848848 FT /rpt_family="MER28" FT repeat_region 18848852..18849146 FT /rpt_family="AluJb" FT repeat_region 18849176..18849247 FT /rpt_family="TIGGER2" FT repeat_region 18849331..18849629 FT /rpt_family="AluSq" FT repeat_region complement(18850303..18850355) FT /rpt_family="(TGAA)n" FT repeat_region 18850656..18850780 FT /rpt_family="MER77" FT repeat_region 18850781..18851076 FT /rpt_family="AluSx" FT repeat_region 18851077..18851173 FT /rpt_family="MER77" FT repeat_region 18851247..18851479 FT /rpt_family="MER77" FT repeat_region 18851532..18851832 FT /rpt_family="AluSx" FT mRNA join(<18853720..18853836,18854918..18854965, FT 18856633..18856770,18857863..18857924,18860591..18860685, FT 18864310..18864395,18870361..18870401,18870818..18871038, FT 18876214..18876338,18879295..>18879603) FT /product="Homo sapiens mRNA for KIAA0616 protein, partial FT cds" FT /note="non-consensus splice sites at positions 20647 and FT 21740" FT CDS join(<18853720..18853836,18854918..18854965, FT 18856633..18856770,18857863..18857924,18860591..18860685, FT 18864310..18864395,18870361..18870401,18870818..18871038, FT 18876214..18876338,18879295..>18879603) FT /codon_start=1 FT /product="KIAA0616 protein" FT /note="non-consensus splice sites at positions 20647 and FT 21740" FT /protein_id="AAC97072.1" FT /translation="LQLQKSQYLQLGPSRGQYYGGSLPNVNQIGSGTMDLPFQPSGFLG FT EALAAAPVSLTPFQSSGLDTSRTTRHHGLVDRVYRERGRLGSPHRRPLSVDKHGRQADS FT CPYGTMYLSPPADTSWRRTNSDSALHQSTMTPTQPESFSSGSQDVHQKRVLLLTVPGME FT ETTSEADKNLSKQAWDTKKTGSRPKSCEVPGINIFPSADQENTTALIPATHNTGGSLPD FT LTNIHFPSPLPTPLDPEEPTFPALSSSSSTGNLAANLTHLGIGGAGQGMSTPGSSPQHR FT PAGVSPLSLSTEARRQQASPTLSPLSPITQAVAMDALSLEQQLPYAFFTQAGSQQPPPQ FT PQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVTVPSSLPQSP FT PENPGQPSMGIDIAS" FT repeat_region 18855284..18855342 FT /rpt_family="(CA)n" FT repeat_region 18858165..18858454 FT /rpt_family="AluSx" FT repeat_region 18858606..18858904 FT /rpt_family="AluJo" FT repeat_region 18858943..18859032 FT /rpt_family="L1MB3" FT repeat_region complement(18859067..18859328) FT /rpt_family="AluSg" FT repeat_region 18859345..18859528 FT /rpt_family="AluJo" FT repeat_region 18859530..18859576 FT /rpt_family="(CA)n" FT repeat_region complement(18859650..18859827) FT /rpt_family="MIR" FT repeat_region complement(18860267..18860373) FT /rpt_family="FLAM_A" FT repeat_region 18861517..18861544 FT /rpt_family="(GGA)n" FT repeat_region 18862052..18862353 FT /rpt_family="AluSg" FT repeat_region 18862688..18862977 FT /rpt_family="AluSx" FT repeat_region complement(18863127..18863428) FT /rpt_family="AluJb" FT repeat_region complement(18863449..18863747) FT /rpt_family="AluSx" FT repeat_region 18863794..18864105 FT /rpt_family="AluY" FT repeat_region 18864628..18864930 FT /rpt_family="AluSx" FT repeat_region 18865058..18865337 FT /rpt_family="AluJo" FT repeat_region complement(18865735..18865792) FT /rpt_family="(TAAAA)n" FT repeat_region complement(18865794..18866078) FT /rpt_family="AluSx" FT repeat_region complement(18866079..18866289) FT /rpt_family="AluJo" FT repeat_region complement(18866411..18866711) FT /rpt_family="AluSx" FT repeat_region complement(18866713..18866781) FT /rpt_family="AluJo" FT repeat_region 18866862..18867164 FT /rpt_family="AluSq" FT repeat_region 18867175..18867437 FT /rpt_family="AluJo" FT repeat_region 18868404..18868536 FT /rpt_family="AluJ" FT repeat_region 18868545..18868849 FT /rpt_family="AluY" FT repeat_region 18868891..18869189 FT /rpt_family="AluY" FT repeat_region 18869841..18870030 FT /rpt_family="AluJ" FT repeat_region complement(18873757..18873908) FT /rpt_family="MER7A" FT repeat_region complement(18873910..18874210) FT /rpt_family="AluSx" FT repeat_region complement(18874212..18874404) FT /rpt_family="MER7B" FT repeat_region 18876490..18876786 FT /rpt_family="AluJb" FT repeat_region complement(18876844..18876934) FT /rpt_family="L1" FT repeat_region complement(18876935..18877248) FT /rpt_family="AluSx" FT repeat_region complement(18877270..18877556) FT /rpt_family="AluSx" FT repeat_region complement(18877557..18877661) FT /rpt_family="L1" FT repeat_region complement(18877659..18877714) FT /rpt_family="L1" FT repeat_region 18877738..18877777 FT /rpt_family="Alu" FT repeat_region complement(18877778..18877937) FT /rpt_family="L1" FT repeat_region complement(18877980..18878006) FT /rpt_family="AT_rich" FT repeat_region complement(18878007..18878305) FT /rpt_family="AluSx" FT repeat_region complement(18879366..18879464) FT /rpt_family="(CGG)n" FT repeat_region complement(18881377..18881435) FT /rpt_family="(CA)n" FT repeat_region complement(18881440..18881511) FT /rpt_family="(CATG)n" FT repeat_region complement(18881536..18881660) FT /rpt_family="(CA)n" FT repeat_region complement(18881671..18881806) FT /rpt_family="(CATG)n" FT repeat_region complement(18881808..18881922) FT /rpt_family="(CATA)n" FT misc_feature 18881917..18882188 FT /note="DDS similarity to T82171 yd95g06.r1 Homo sapiens FT cDNA clone 116026 5' similar to contains TAR1 repetitive FT element.Score: 478 Identity: 262/274 (95%). ~ ~Other FT overlapping matches:~(11993..12136) predicted exon, FT program: grail2exons_human_1.3, frame: 2, quality: FT excellent, score: 81.000~(12176..11917) DDS similarity to FT T95404 ye43g01.r1 Homo sapiens cDNA clone 120528 5'. Score: FT 471 Identity: 258/263 (98%).~~(12713..11917) DDS FT similarity to T84000 yd66d10.r1 Homo sapiens cDNA clone FT 113203 5'. Score: 400 Identity: 257/275 FT (93%).~~(11965..12181) DDS similarity to T95320 ye43g01.s1 FT Homo sapiens cDNA clone 120528 3' similar to gb:M64241 QM FT PROTEIN (HUMAN).Score: 334 Identity: 203/218 (93%)." FT misc_feature 18882252..18882356 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 52.000~~DDS similarity to FT AA378771 EST91505 Synovial sarcoma Homo sapiens cDNA 5' end FT (61..165). 96% identity.~" FT misc_feature 18883677..18883706 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 54.000" FT misc_feature 18884356..18884458 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 77.000" FT misc_feature 18885675..18885796 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 65.000" FT misc_feature 18885710..18885765 FT /note="DDS similarity to AA378771 EST91505 Synovial sarcoma FT Homo sapiens cDNA 5' end (166..221); 99% identity.~" FT misc_feature 18886451..18886631 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature 18887230..18887317 FT /note="DDS similarity to T95918 ye42a04.r1 Homo sapiens FT cDNA clone 120366 5'. Score: 163 Identity: 86/87 (98%)." FT misc_feature 18888024..18888188 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT misc_feature 18888534..18888758 FT /note="DDS similarity to AA252605 zs14b02.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone 685131 3' end. Score: 424 Identity: FT 225/225 (100%)." FT misc_feature 18890683..18892268 FT /note="DDS similarity to overlapping ESTS:~(20682..21075) FT AA350958 EST58512 Infant brain Homo sapiens cDNA 5' end; FT Score: 776 Identity: 391/394 (99%).~(20863..21259) R87396 FT ym88h07.r1 Homo sapiens cDNA clone 166045 5'. Score: 748 FT Identity: 391/401 (97%).~(20874..21249) AA349930 EST57030 FT Infant brain Homo sapiens cDNA 5' end; Score: 748 Identity: FT 375/376 (99%).~(21125..21574) R19558 yg26h07.r1 Homo FT sapiens cDNA clone 33726 5'. Score: 811 Identity: 440/457 FT (96%).~(21589..22030) H30788 yo79f06.r1 Homo sapiens cDNA FT clone 184163 5' similar to gb:M33326 NONSPECIFIC FT CROSS-REACTING ANTIGEN NCA-95 (HUMAN);contains Alu FT repetitive element. Score: 817 Identity: 433/443 FT (97%).~(22007..22267) AA322326 EST24948 Cerebellum II Homo FT sapiens cDNA 5' end; Score: 479 Identity: 252/262 (96%).~" FT repeat_region complement(18891513..18891627) FT /rpt_family="Alu" FT misc_feature 18892507..18892981 FT /note="DDS similarity to R88263 ym90h09.s1 Homo sapiens FT cDNA clone 166241 3'. Score: 837 Identity: 455/478 FT (95%).~~Other overlapping matches:~(23013..22497) H05926 FT yl71f07.s1 Homo sapiens cDNA clone 43353 3'. Score: 872 FT Identity: 497/527 (94%).~(22971..22534) AA446916 zw85a01.s1 FT Soares total fetus Nb2HF8 9w Homo sapiens cDNA clone 783720 FT 3'; Score: 857 Identity: 436/437 FT (99%)~(22971..22561)W95490 ze02g07.s1 Soares fetal heart FT NbHH19W Homo sapiens cDNA clone 357852 3';~Score: 774 FT Identity: 399/411 (97%).~(22566..22949) W95528 ze02g07.r1 FT Soares fetal heart NbHH19W Homo sapiens cDNA clone 357852 FT 5';Score: 674 Identity: 366/382 (95%).~(22996..22634) FT T33668 EST58674 Homo sapiens cDNA 3' end similar to None..; FT Score: 710 Identity: 359/363 (98%)." FT misc_feature complement(18893577..18893771) FT /note="DDS similarity to N94385 zb76d06.s1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 309515 3'~ FT similar to gb:Z19585 THROMBOSPONDIN 4 PRECURSOR (HUMAN); FT (194..1); 92% identity.~~Other overlapping FT matches:~(23724..23770) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: good, score: FT 74.000~~(23770..23664) DDS similarity to W36954 mb82e10.r1 FT Soares mouse p3NMF19.5 Mus musculus cDNA clone 335946 5' FT similar to ~gb:Z19585 THROMBOSPONDIN 4 PRECURSOR (HUMAN); FT gb:M86620 Mouse thrombospondin 3 (MOUSE) (307..423); 63% FT identity." FT gene complement(18893684..18902078) FT /gene="COMP" FT /note="CARTILAGE OLIGOMERIC MATRIX PROTEIN PRECURSOR FT (COMP)" FT CDS complement(join(18893725..18893771,18893684..18894003, FT 18895001..18895173,18895706..18895902,18896308..18896356, FT 18896483..18896661,18896775..18896956,18897049..18897101, FT 18897342..18897460,18898300..18898459,18899021..18899128, FT 18899219..18899323,18899401..18899559,18899648..18899722, FT 18899969..18900106,18900751..18900923,18901371..18901422, FT 18901659..18901744,18902000..18902078)) FT /codon_start=1 FT /gene="COMP" FT /product="COMP_HUMAN" FT /note="CARTILAGE OLIGOMERIC MATRIX PROTEIN PRECURSOR FT (COMP)" FT /protein_id="AAB86501.1" FT /translation="MVPDTACVLLLTLAALGASGQGQSPLGSDLGPQMLRELQETNAAL FT QDVRELLRQQVREITFLKNTVMECDACGMQQSVRTGLPSVRPLLHCAPGFCFPGVACIQ FT TESGARCGPCPAGFTGNGSHCTDVNECNAHPCFPRVRCINTSPGFRCEACPPGYSGPTH FT QGVGLAFAKANKQVCTDINECETGQHNCVPNSVCINTRGSFQCGPCQPGFVGDQASGCQ FT RRAQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCGRDTDLDGFPDEKLR FT CPERQCRKDNCVTVPNSGQEDVDRDGIGDACDPDADGDGVPNEKDNCPLVRNPDQRNTD FT EDKWGDACDNCRSQKNDDQKDTDQDGRGDACDDDIDGDRIRNQADNCPRVPNSDQKDSD FT GDGIGDACDNCPQKSNPDQADVDHDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQED FT SDHDGQGDACDDDDDNDGVPDSRDNCRLVPNPGQEDADRDGVGDVCQDDFDADKVVDKI FT DVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWVVLNQGREIVQTMNSDPGLAVGYTA FT FNGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGI FT QLKAVKSSTGPGEQLRNALWHTGDTESQVRLLWKDPRNVGWKDKKSYRWFLQHRPQVGY FT IRVRFYEGPELVADSNVVLDTTMRGGRLGVFCFSQENIIWANLRYRCNGEPRASGPWAG FT SLHTGPAGLLSPHPPALSLQTPSQRTMRPISCGKPRDQGEDPPDDSHPHHTIPEDYETH FT QLRQA" FT misc_feature complement(18893864..18894003) FT /gene="COMP" FT /note="DDS similarity to N94385 zb76d06.s1 Soares senescent FT fibroblasts NbHSF Homo sapiens cDNA clone 309515 3'~ FT similar to gb:Z19585 THROMBOSPONDIN 4 PRECURSOR FT (HUMAN);(333..195); 98% identity~~Other overlapping FT matches:~predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to W36954 mb82e10.r1 Soares mouse p3NMF19.5 Mus FT musculus cDNA clone 335946 5' similar to gb:Z19585 FT THROMBOSPONDIN 4 PRECURSOR (HUMAN); gb:M86620 Mouse FT thrombospondin 3 (MOUSE) (167..306); 89% identity.~" FT repeat_region complement(18894299..18894412) FT /rpt_family="Alu" FT repeat_region complement(18894422..18894849) FT /rpt_family="Alu" FT misc_feature complement(18895001..18895172) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 90.000~Other FT overlapping matches:~DDS similarity to N94385 zb76d06.s1 FT Soares senescent fibroblasts NbHSF Homo sapiens cDNA clone FT 309515 3'~ similar to gb:Z19585 THROMBOSPONDIN 4 PRECURSOR FT (HUMAN); (505..334); 91% identity.~~DDS similarity to FT W36954 mb82e10.r1 Soares mouse p3NMF19.5 Mus musculus cDNA FT clone 335946 5' similar to gb:Z19585 THROMBOSPONDIN 4 FT PRECURSOR (HUMAN); gb:M86620 Mouse thrombospondin 3 (MOUSE) FT (76..166); 87% identity.~" FT misc_feature complement(18895674..18895901) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~Other FT overlapping matches:~(25810..25737) W36954 mb82e10.r1 FT Soares mouse p3NMF19.5 Mus musculus cDNA clone 335946 5' FT similar to ~gb:Z19585 THROMBOSPONDIN 4 PRECURSOR (HUMAN); FT gb:M86620 Mouse thrombospondin 3 (MOUSE); (1..75); 89% FT identity." FT misc_feature complement(18896307..18896355) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(18896465..18896660) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(18896751..18896955) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature complement(18897048..18897100) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 94.000" FT misc_feature complement(18897341..18897459) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(18897584..18897869) FT /rpt_family="Alu" FT misc_feature complement(18898300..18898457) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~Other FT overlapping matches:~(28435..28299) DDS similarity to FT H13980 EST00006 Homo sapiens genomic clone D4-13 5' similar FT to human germline oligomeric matrix protein (COMP). Score: FT 274 Identity: 137/137 (100%)" FT repeat_region complement(18898724..18898989) FT /rpt_family="Alu" FT misc_feature complement(18898996..18899127) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 94.000" FT misc_feature complement(18899218..18899322) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(18899400..18899558) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 94.000" FT misc_feature complement(18899647..18899721) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(18899968..18900105) FT /gene="COMP" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(18900725..18900923) FT /gene="COMP" FT /note="DDS similarity to AA015397 mh21h08.r1 Soares mouse FT placenta 4NbMP13.5 14.5 Mus musculus cDNA clone 443~199 5' FT similar to SW:COMP_RAT P35444 CARTILAGE OLIGOMERIC MATRIX FT PROTEIN PRECURSOR ;(229..425); 72% FT identity.~~(30922..30748) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 95.000" FT misc_feature complement(18901371..18901422) FT /gene="COMP" FT /note="DDS similarity to AA015397 mh21h08.r1 Soares mouse FT placenta 4NbMP13.5 14.5 Mus musculus cDNA clone 443~199 5' FT similar to SW:COMP_RAT P35444 CARTILAGE OLIGOMERIC MATRIX FT PROTEIN PRECURSOR ; (177..228); 86% identity.~~predicted FT exon, program: grail2exons_human_1.3, frame: 1, quality: FT excellent, score: 88.000" FT misc_feature complement(18901659..18901744) FT /gene="COMP" FT /note="DDS similarity to AA015397 mh21h08.r1 Soares mouse FT placenta 4NbMP13.5 14.5 Mus musculus cDNA clone 443~199 5' FT similar to SW:COMP_RAT P35444 CARTILAGE OLIGOMERIC MATRIX FT PROTEIN PRECURSOR ; (91..176); 79% FT identity.~~~~(31743..31645) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 100.000" FT misc_feature complement(18902000..18902097) FT /note="DDS similarity to AA015397 mh21h08.r1 Soares mouse FT placenta 4NbMP13.5 14.5 Mus musculus cDNA clone 443~199 5' FT similar to SW:COMP_RAT P35444 CARTILAGE OLIGOMERIC MATRIX FT PROTEIN PRECURSOR ;(1..90); 73% identity.~~predicted exon, FT program: grail2exons_human_1.3, frame: 2, quality: FT marginal, score: 45.000" FT repeat_region complement(18902454..18902607) FT /rpt_family="Alu" FT repeat_region 18902837..18902964 FT /rpt_family="Alu" FT misc_feature complement(18904411..18904523) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 50.000" FT repeat_region complement(18905125..18905575) FT /rpt_family="Alu" FT repeat_region 18905666..18905760 FT /rpt_family="MIR" FT repeat_region 18905883..18906176 FT /rpt_family="Alu" FT repeat_region complement(18906888..18907027) FT /rpt_family="Alu" FT repeat_region 18907323..18907375 FT /rpt_family="MIR" FT repeat_region 18907500..18907802 FT /rpt_family="Alu" FT repeat_region complement(18907990..18908254) FT /rpt_family="Alu" FT repeat_region 18908530..18909197 FT /rpt_family="Alu" FT misc_feature complement(18909498..18909727) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 55.000" FT repeat_region complement(18912381..18912670) FT /rpt_family="Alu" FT repeat_region 18912854..18912983 FT /rpt_family="Alu" FT repeat_region complement(18912983..18913227) FT /rpt_family="Alu" FT repeat_region complement(18913605..18913864) FT /rpt_family="Alu" FT repeat_region 18914134..18914374 FT /rpt_family="Alu" FT misc_feature 18915116..18915342 FT /note="DDS similarity to H14014 EST00040 Homo sapiens FT genomic clone D4-12 5'; (1..220); Score: 375 Identity: FT 216/220 (98%)." FT repeat_region complement(18915714..18915811) FT /rpt_family="Alu" FT repeat_region complement(18916193..18916249) FT /rpt_family="Alu" FT repeat_region complement(18916168..18916467) FT /rpt_family="AluJb" FT repeat_region 18916507..18916811 FT /rpt_family="AluSx" FT repeat_region 18916830..18917127 FT /rpt_family="AluY" FT repeat_region 18917147..18917260 FT /rpt_family="AluJb" FT repeat_region complement(18917261..18917560) FT /rpt_family="AluSg" FT repeat_region 18917588..18917696 FT /rpt_family="AluSx" FT repeat_region 18917697..18917995 FT /rpt_family="AluSc" FT repeat_region 18917999..18918195 FT /rpt_family="AluSx" FT repeat_region 18918196..18918227 FT /rpt_family="AT_rich" FT repeat_region complement(18919144..18919456) FT /rpt_family="AluJb" FT repeat_region 18919544..18919845 FT /rpt_family="AluSx" FT repeat_region 18920181..18920312 FT /rpt_family="AluSg/x" FT repeat_region complement(18920318..18920755) FT /rpt_family="L1MB6" FT misc_feature complement(18920565..18920697) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 75.000" FT repeat_region complement(18920769..18920948) FT /rpt_family="AluSx" FT repeat_region complement(18920954..18921252) FT /rpt_family="AluSg" FT repeat_region complement(18921253..18921389) FT /rpt_family="AluSx" FT repeat_region complement(18921390..18921562) FT /rpt_family="AluJb" FT repeat_region complement(18921567..18921862) FT /rpt_family="AluSp" FT repeat_region 18921900..18922097 FT /rpt_family="AluJb" FT repeat_region complement(18922098..18922378) FT /rpt_family="AluSx" FT repeat_region complement(18922404..18922556) FT /rpt_family="MLT2CB" FT repeat_region complement(18922582..18922880) FT /rpt_family="AluSg" FT repeat_region complement(18922884..18923165) FT /rpt_family="AluJb" FT repeat_region 18923401..18923693 FT /rpt_family="AluJo" FT repeat_region 18923744..18924046 FT /rpt_family="AluSx" FT repeat_region complement(18924627..18924930) FT /rpt_family="AluSx" FT repeat_region complement(18925261..18925560) FT /rpt_family="AluSx" FT repeat_region complement(18925564..18925695) FT /rpt_family="FLAM_A" FT repeat_region 18925811..18925943 FT /rpt_family="AluJ" FT repeat_region 18925947..18926245 FT /rpt_family="AluSp" FT repeat_region 18926249..18926407 FT /rpt_family="AluJ" FT repeat_region complement(18926574..18926650) FT /rpt_family="MIR" FT repeat_region complement(18926789..18927092) FT /rpt_family="AluSx" FT repeat_region complement(18927096..18927396) FT /rpt_family="AluJo" FT repeat_region 18927673..18927971 FT /rpt_family="AluSx" FT repeat_region complement(18928150..18928445) FT /rpt_family="AluSx" FT repeat_region 18928528..18928597 FT /rpt_family="MIR" FT repeat_region complement(18928643..18928764) FT /rpt_family="MER20" FT repeat_region 18928767..18928896 FT /rpt_family="MER53" FT repeat_region 18928899..18929190 FT /rpt_family="AluSg" FT repeat_region 18929192..18929268 FT /rpt_family="L1" FT repeat_region complement(18929269..18929568) FT /rpt_family="AluY" FT repeat_region complement(18929622..18929903) FT /rpt_family="AluJo" FT repeat_region complement(18929913..18929993) FT /rpt_family="MLT1A2" FT repeat_region complement(18929994..18930294) FT /rpt_family="AluY" FT repeat_region complement(18930297..18930341) FT /rpt_family="MLT1A2" FT repeat_region complement(18930351..18930647) FT /rpt_family="AluSx" FT repeat_region 18930690..18930865 FT /rpt_family="L1" FT repeat_region complement(18930867..18931013) FT /rpt_family="AluSx" FT repeat_region complement(18931016..18931317) FT /rpt_family="AluY" FT repeat_region complement(18931318..18931453) FT /rpt_family="AluSx" FT repeat_region complement(18931469..18931754) FT /rpt_family="AluJb" FT repeat_region 18931757..18932171 FT /rpt_family="MLT2CB" FT repeat_region 18932178..18932473 FT /rpt_family="AluSx" FT repeat_region 18932484..18932616 FT /rpt_family="FLAM_C" FT repeat_region 18932646..18932707 FT /rpt_family="MLT2CB" FT repeat_region complement(18932772..18933070) FT /rpt_family="AluJb" FT repeat_region complement(18933084..18933292) FT /rpt_family="HERVL" FT repeat_region complement(18933300..18933521) FT /rpt_family="AluY" FT repeat_region complement(18933522..18933817) FT /rpt_family="AluSx" FT repeat_region 18933862..18933924 FT /rpt_family="AluJo" FT repeat_region 18933929..18934228 FT /rpt_family="AluY" FT repeat_region 18934272..18934443 FT /rpt_family="AluJo" FT repeat_region complement(18934444..18934531) FT /rpt_family="L1" FT repeat_region complement(18934537..18934842) FT /rpt_family="AluJb" FT repeat_region complement(18934947..18934967) FT /rpt_family="AT_rich" FT repeat_region complement(18934968..18935268) FT /rpt_family="AluSc" FT repeat_region complement(18935282..18935401) FT /rpt_family="L1" FT repeat_region complement(18935402..18935703) FT /rpt_family="AluSp" FT repeat_region complement(18935722..18936021) FT /rpt_family="AluSg" FT repeat_region complement(18936102..18936386) FT /rpt_family="AluJo" FT repeat_region complement(18936392..18936512) FT /rpt_family="L1" FT repeat_region complement(18936518..18936816) FT /rpt_family="AluSx" FT repeat_region complement(18936829..18937312) FT /rpt_family="L1" FT repeat_region 18937313..18937614 FT /rpt_family="AluSx" FT repeat_region 18937636..18937937 FT /rpt_family="AluJb" FT repeat_region complement(18937941..18938068) FT /rpt_family="AluJo/FLAM" FT repeat_region complement(18938074..18938177) FT /rpt_family="L1M3/4" FT repeat_region complement(18938179..18938486) FT /rpt_family="AluSx" FT repeat_region complement(18938492..18938592) FT /rpt_family="POLY_A" FT repeat_region 18938727..18939019 FT /rpt_family="AluJo" FT repeat_region complement(18939238..18939356) FT /rpt_family="AluJb" FT repeat_region 18939388..18939680 FT /rpt_family="AluSx" FT repeat_region complement(18939943..18940047) FT /rpt_family="LINE2" FT repeat_region complement(18940082..18940226) FT /rpt_family="(TA)n" FT repeat_region 18940286..18940339 FT /rpt_family="(TA)n" FT repeat_region 18940372..18940474 FT /rpt_family="(TA)n" FT repeat_region complement(18940476..18940755) FT /rpt_family="AluSx" FT repeat_region 18940787..18940906 FT /rpt_family="AluJb" FT repeat_region complement(18941123..18941143) FT /rpt_family="AT_rich" FT repeat_region complement(18941159..18941207) FT /rpt_family="Alu" FT repeat_region complement(18941278..18941327) FT /rpt_family="(TA)n" FT repeat_region complement(18941332..18941465) FT /rpt_family="AluJ" FT repeat_region complement(18941489..18941585) FT /rpt_family="MIR" FT repeat_region 18941610..18941650 FT /rpt_family="(TAA)n" FT repeat_region complement(18941725..18941892) FT /rpt_family="AluJ" FT repeat_region complement(18941893..18942190) FT /rpt_family="AluY" FT repeat_region complement(18942191..18942323) FT /rpt_family="AluJ" FT repeat_region complement(18942377..18942403) FT /rpt_family="MIR" FT repeat_region 18942746..18942848 FT /rpt_family="(CGG)n" FT gene 18942788..>18943255 FT /gene="pNORF1" FT /note="regulator of nonsense transcript stability; FT KIAA0221; HUPF1; Type 1 RNA helicase; human homolog of FT yeast UPF1" FT CDS 18943019..>18943255 FT /codon_start=1 FT /gene="pNORF1" FT /product="pNORF1" FT /note="regulator of nonsense transcript stability; FT Remainder of pNORF1 CDS in downstream cosmid R33485 FT (AC003972)" FT /protein_id="AAC09016.1" FT /translation="MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQ FT TPPGGPGGPGGGGAGGPGGAGAGAAAGQLDAQVS" FT misc_feature 18943019..18943300 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 80.000" FT repeat_region complement(18943155..18943233) FT /rpt_family="GC_rich" FT misc_feature 18944293..18944503 FT /note="BLASTN similarity to cpg266h4.ft1a (1..211); match: FT 0.97, score: 5.2e-77; database searched: Sanger CpG; bases FT 86 to 296 (SL to QR)" FT misc_feature complement(18944540..18944733) FT /note="BLASTN similarity to cpg266h4.rt1a (11..204); match: FT 0.97, score: 6.4e-70; database searched: Sanger CpG; bases FT 61 to 264 (SL to QR)" FT repeat_region complement(18945748..18946054) FT /rpt_family="L1MB5" FT repeat_region complement(18946114..18946144) FT /rpt_family="L1M4" FT repeat_region complement(18946149..18946448) FT /rpt_family="AluSg" FT repeat_region complement(18946449..18946642) FT /rpt_family="L1MB5" FT repeat_region 18947160..18947520 FT /rpt_family="L1ME1" FT repeat_region complement(18947561..18947860) FT /rpt_family="AluY" FT repeat_region complement(18947900..18948195) FT /rpt_family="AluJb" FT repeat_region 18948238..18948380 FT /rpt_family="L1M4" FT misc_feature 18948248..18948761 FT /note="DDS similarity to AA313476 EST185361 Colon carcinoma FT (HCC) cell line Homo sapiens cDNA 5' end. Score: 1019 FT Identity: 513/513 (100%)." FT repeat_region 18949000..18949171 FT /rpt_family="FRAM" FT repeat_region 18949176..18949469 FT /rpt_family="AluSp" FT repeat_region complement(18949907..18950202) FT /rpt_family="AluSx" FT repeat_region complement(18951028..18951081) FT /rpt_family="(CA)n" FT repeat_region 18952745..18952920 FT /rpt_family="AluJo" FT repeat_region complement(18953496..18953519) FT /rpt_family="AT_rich" FT repeat_region 18953528..18953810 FT /rpt_family="AluSp" FT repeat_region complement(18953817..18953931) FT /rpt_family="FLAM_C" FT repeat_region complement(18954006..18954092) FT /rpt_family="LINE2" FT repeat_region complement(18954328..18954529) FT /rpt_family="AluSg/x" FT repeat_region complement(18954530..18954561) FT /rpt_family="(CA)n" FT repeat_region complement(18954573..18954845) FT /rpt_family="AluJo" FT repeat_region complement(18955128..18955383) FT /rpt_family="AluSq" FT CDS join(18943019..18943249,18956789..18956928, FT 18958553..18958642,18960884..18961051,18961497..18961677, FT 18962944..18963105,18963796..18963880,18964061..18964159, FT 18965410..18965518,18965688..18965847,18965933..18966051, FT 18966734..18966898,18966995..18967109,18967686..18967829, FT 18968129..18968342,18971130..18971247,18971635..18971791, FT 18972819..18972961,18974247..18974421,18974979..18975060, FT 18976098..18976259,18976370..18976587,18976853..18976972) FT /codon_start=1 FT /product="pNORF1" FT /note="human type 1 RNA helicase; DPS similarity to FT (U59323) type 1 RNA helicase pNORF1 [Homo sapiens]; Score: FT 5190 Identity: 1103/1118 (98%); ~gi|1575536 (U65533) FT regulator of nonsense transcript stability [Homo sapiens]; FT Score: 5170 Identity: 1100/1118 (98%); FT gi|1944407|gnl|PID|d1020441 (D86988) KIAA0221 [Homo FT sapiens]; Score: 5257 Identity: 1115/1129 (98%)" FT /protein_id="AAB94785.1" FT /translation="MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQ FT TPPGGPGGPGGGGAGGPGGAGAGAAAGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELN FT FEEDEEDTYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRA FT KCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDI FT NWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLE FT KPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKK FT RIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSV FT GAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ FT LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPV FT LVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK FT LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILI FT DESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIR FT PIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQG FT QEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGS FT LHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVI FT IVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFM FT TTAMYDAREAIIPGSVYDRSSQGRPSSMYFQTHDQIGMISAGPSHVAAMNIPIPFNLVM FT PPMPPPGYFGQANGPAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQP FT FSQGALTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAY FT QHGGVTGLSQY" FT repeat_region complement(18955130..18955432) FT /rpt_family="Alu" FT misc_feature complement(18956763..18956922) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 71.000~~Other overlapping FT matches:~(14664..14800) DDS similarity to H13969 EST00061 FT Homo sapiens genomic clone D4-1 5' (1..137); 100% FT identity.~~(14687..14800) DDS similarity to H13971 EST00063 FT Homo sapiens genomic clone D4-16 5' (1..114); 99% FT identity." FT repeat_region 18957527..18957786 FT /rpt_family="Alu" FT misc_feature 18958553..18958642 FT /note="DDS similarity to overlapping ESTs:~~(16425..16489) FT H13969 EST00061 Homo sapiens genomic clone D4-1 FT 5'(138..194); 96% identity.~~(16425..16514) H13971 EST00063 FT Homo sapiens genomic clone D4-16 5' (115..203); 96% FT identity." FT misc_feature 18964061..18964181 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 52.000~~Other overlapping FT matches:~(21960..22031) DDS similarity to AA170942 FT ms50b01.r1 Life Tech mouse embryo 13 5dpc 10666014~ Mus FT musculus cDNA clone 614953 5' similar to SW:YAC6_SCHPO FT Q09820 HYPOTHETICAL 105.6 KD PROTEIN C16C9.06C IN FT CHROMOSOME I; (1..72); 90% identity." FT misc_feature 18965410..18965518 FT /note="DDS similarity to AA170942 ms50b01.r1 Life Tech FT mouse embryo 13 5dpc 10666014 Mus musculus cDNA clone FT 614953 5' similar to SW:YAC6_SCHPO Q09820 HYPOTHETICAL FT 105.6 KD PROTEIN C16C9.06C IN CHROMOSOME I; (73..182); 88% FT identity." FT misc_feature 18965688..18966004 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 78.000" FT misc_feature 18965688..18965859 FT /note="DDS similarity to AA170942 ms50b01.r1 Life Tech FT mouse embryo 13 5dpc 10666014 Mus musculus cDNA clone FT 614953 5' similar to SW:YAC6_SCHPO Q09820 HYPOTHETICAL FT 105.6 KD PROTEIN C16C9.06C IN CHROMOSOME I; (183..342); 86% FT identity." FT misc_feature 18965933..18966043 FT /note="DDS similarity to AA170942 ms50b01.r1 Life Tech FT mouse embryo 13 5dpc 10666014 Mus musculus cDNA clone FT 614953 5' similar to SW:YAC6_SCHPO Q09820 HYPOTHETICAL FT 105.6 KD PROTEIN C16C9.06C IN CHROMOSOME I; (343..453); 85% FT identity." FT repeat_region 18966446..18966662 FT /rpt_family="Alu" FT misc_feature 18966995..18967109 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~Other FT overlapping matches:~(24883..24981) DDS similarity to FT H14015 EST00042 Homo sapiens genomic clone D5-25 5'. Score: FT 173 Identity: 95/96 (98%)." FT misc_feature 18967337..18967805 FT /note="DDS similarity to AA309347 EST180284 Liver III Homo FT sapiens cDNA 5' end similar to similar to NAM7 protein; FT Score: 922 Identity: 465/469 (99%)." FT misc_feature 18968129..18968342 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 99.000" FT misc_feature complement(18970601..18970912) FT /note="DDS similarity to AA309352 EST180289 Liver III Homo FT sapiens cDNA 5' end; Score: 620 Identity: 311/312 (99%)." FT misc_feature 18971130..18971247 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~Other FT overlapping matches:~(29041..29119) AA416671 zu18a07.r1 FT Soares NhHMPu S1 Homo sapiens cDNA clone 738324 5' similar FT to SW:NAM7_YEAST P30771 NAM7 PROTEIN ; (1..79) 100% FT identity." FT misc_feature 18971524..18972079 FT /note="DDS similarity to AA573895 nk09a05.s1 NCI_CGAP_Co2 FT Homo sapiens cDNA clone IMAGE:1012976 similar to FT SW:NAM7_YEAST P30771 NAM7 PROTEIN ; (1..557)~Score: 1081 FT Identity: 550/557 (98%)" FT misc_feature 18971635..18971791 FT /note="DDS similarity to AA416671 zu18a07.r1 Soares NhHMPu FT S1 Homo sapiens cDNA clone 738324 5' similar to FT SW:NAM7_YEAST P30771 NAM7 PROTEIN ;(80..235); 99% FT identity." FT repeat_region 18972388..18972649 FT /rpt_family="Alu" FT misc_feature 18972782..18972961 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 98.000~~Other FT overlapping matches:~(30691..30833) DDS similarity to FT |AA416671 zu18a07.r1 Soares NhHMPu S1 Homo sapiens cDNA FT clone 738324 5' similar to SW:NAM7_YEAST P30771 NAM7 FT PROTEIN; (236..378); 100% identity." FT misc_feature 18972913..18972961 FT /note="DDS similarity to AA393082 zt69a12.r1 Soares testis FT NHT Homo sapiens cDNA clone 727582 5' similar to FT SW:NAM7_YEAST P30771 NAM7 PROTEIN (1..49); 88% identity." FT repeat_region 18973386..18973658 FT /rpt_family="Alu" FT misc_feature 18974245..18974421 FT /note="DDS similarity to overlapping ESTs:~~(32119..32171) FT AA416671 zu18a07.r1 Soares NhHMPu S1 Homo sapiens cDNA FT clone 738324 5' similar to SW:NAM7_YEAST P30771 NAM7 FT PROTEIN; (379..431); 100% identity.~~(32119..32293) FT AA393082 zt69a12.r1 Soares testis NHT Homo sapiens cDNA FT clone 727582 5' similar to SW:NAM7_YEAST P30771 NAM7 FT PROTEIN (50..222); 99% identity.~~(32117..32293) AA410212 FT zv22h03.r1 Soares NhHMPu S1 Homo sapiens cDNA clone 754421 FT 5' similar to SW:NAM7_YEAST P30771 NAM7 PROTEIN (1..176); FT 99% identity.~~(32119..32293) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 100.000" FT misc_feature 18974979..18975060 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~Other FT overlapping matches:~(32851..32932) DDS similarity to FT AA410212 zv22h03.r1 Soares NhHMPu S1 Homo sapiens cDNA FT clone 754421 5' similar to SW:NAM7_YEAST P30771 NAM7 FT PROTEIN (177..257); 99% identity.~~(32851..32932) DDS FT similarity to AA393082 zt69a12.r1 Soares testis NHT Homo FT sapiens cDNA clone 727582 5' similar to SW:NAM7_YEAST FT P30771 NAM7 PROTEIN (223..303); 99% identity.~" FT repeat_region complement(18975399..18975843) FT /rpt_family="Alu" FT misc_feature 18976098..18976259 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 90.000~~Other FT overlapping matches:~(33970..34131) DDS similarity to FT AA393082 zt69a12.r1 Soares testis NHT Homo sapiens cDNA FT clone 727582 5' similar to SW:NAM7_YEAST P30771 NAM7 FT PROTEIN (304..465); 100% identity.~~(33970..34131) FT |AA410212 zv22h03.r1 Soares NhHMPu S1 Homo sapiens cDNA FT clone 754421 5' similar to SW:NAM7_YEAST P30771 NAM7 FT PROTEIN (258..419); 100% identity.~~(34071..34131) |T03660 FT IB693 Infant brain, Bento Soares Homo sapiens cDNA clone FT IB693 3'end (480..420); 83% identity." FT misc_feature 18976370..18976587 FT /note="DDS similarity to T03660 IB693 Infant brain, Bento FT Soares Homo sapiens cDNA clone IB693 3'end (419..202); 100% FT identity." FT misc_feature 18976549..18976587 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 52.000" FT misc_feature 18976853..18976972 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 84.000" FT misc_feature complement(18977994..18978249) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 63.000" FT CDS complement(join(18979406..18980199,18980792..18981116)) FT /codon_start=1 FT /product="GDF-1" FT /note="embryonic growth/differentiation factor; DPS FT similarity to gi|121105|sp|P27539|GDF1_HUMAN EMBRYONIC FT GROWTH/DIFFERENTIATION FACTOR GDF-1 PRECURSOR; FT gi|106077|pir||C39364 GDF-1 embryonic growth factor - FT human; gi|183052 (M62302) ~growth/differentiation factor 1 FT [Homo sapiens]~Score: 1940 Identity: 370/372 FT (99%)~~~gi|109860|pir||A39364 GDF-1 embryonic growth factor FT - mouse; gi|193460 (M62301) growth/ differentiation factor FT 1 [Mus musculus]; Score: 1111 Identity: 255/357 (71%)" FT /protein_id="AAB94786.1" FT /translation="MPPPQQGPCGHHLLLLLALLLPSLPLTRAPVPPGPAAALLQALGL FT RDEPQGAPRLRPVPPVMWRLFRRRDPQETRSGSRRTSPGVTLQPCHVEELGVAGNIVRH FT IPDRGAPTRASEPASAAGHCPEWTVVFDLSAVEPAERPSRARLELRFAAAAAAAPEGGW FT ELSVAQAGQGAGADPGPVLLRQLVPALGPPVRAELLGAAWARNASWPRSLRLALALRPR FT APAACARLAEASLLLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYVSFREVGW FT HRWVIAPRGFLANYCQGQCALPVALSGSGGPPALNHAVLRALMHAAAPGAADLPCCVPA FT RLSPISVLFFDNSDNVVLRQYEDMVVDECGCR" FT misc_feature complement(18981386..18981428) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 84.000" FT repeat_region complement(18981904..18982456) FT /rpt_family="Alu" FT repeat_region complement(18983150..18983748) FT /rpt_family="Alu" FT repeat_region 18984235..18984665 FT /rpt_family="Alu" FT misc_feature complement(18984935..18985041) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 79.000" FT repeat_region complement(18985112..18985287) FT /rpt_family="AluJb" FT repeat_region 18985764..18986062 FT /rpt_family="AluJo" FT repeat_region 18986073..18986370 FT /rpt_family="AluSx" FT repeat_region 18986371..18986512 FT /rpt_family="LTR20" FT repeat_region 18986555..18986850 FT /rpt_family="MLT1C" FT repeat_region complement(18986866..18987094) FT /rpt_family="AluSx" FT repeat_region complement(18987160..18987346) FT /rpt_family="AluJb" FT repeat_region complement(18987500..18987854) FT /rpt_family="L1MD3" FT repeat_region 18988278..18988585 FT /rpt_family="AluJb" FT repeat_region 18988704..18988795 FT /rpt_family="LINE2" FT misc_feature 18988725..18989168 FT /note="BLASTN similarity to AI017572 (5..448); match: 1, FT score: 1.0e-176; database searched: month.na; ou23f08.x1 FT Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1627143 FT 3'" FT mRNA complement(<18989738..19006905) FT /product="HUMGDF1 Human growth/differentiation factor 1 FT (GDF-1) mRNA" FT /note="growth/differentiation factor 1; transforming growth FT factor-beta.~~UOG1 and GDF1 presumably translated from FT bicistronic GDF-1 mRNA (M62302)." FT CDS complement(join(<18989738..18989848,18990050..18990197, FT 18991083..18991244,18994896..18995076,19004225..19004384, FT 19006633..19006881)) FT /codon_start=1 FT /product="UOG1_HUMAN" FT /note="HYPOTHETICAL UOG-1 PROTEIN; GDF-1 embryonic growth FT factor 5' hypothetical protein" FT /protein_id="AAC24611.1" FT /translation="MAAAGPAAGPTGPEPMPSYAQLVQRGWGSALAAARGCTDCGWGLA FT RRGLAEHAHLAPPELLLLALGALGWTALRSAATARLFRPLAKRCCLQPRDAAKMPESAW FT KFLFYLGSWSYSAYLLFGTDYPFFHDPPSVFYDWTPGMAVPRDIAAAYLLQGSFYGHSI FT YATLYMDTWRKDSVVMLLHHVVTLILIVSSYAFRYHNVGILVLFLHDISDVQLEFTKLN FT IYFKSRGGSYHRLHALAADLGCLSFGFSWFWFRLYWFPLKVLYATSHCSLRTVPDIPFY FT FFFNALLLLLTLMNLYWFLYIVAFAAKVLTGQVHELKDLREYDTAEAQSLKPSKAE" FT misc_feature complement(18989739..18989848) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature complement(18990050..18990197) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region complement(18990456..18990597) FT /rpt_family="(GGGA)n" FT misc_feature complement(18991083..18991244) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region complement(18991512..18991807) FT /rpt_family="AluJo" FT misc_feature complement(18991876..18991995) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 88.000" FT repeat_region complement(18992024..18992328) FT /rpt_family="AluSp" FT repeat_region 18992458..18992595 FT /rpt_family="LINE2" FT repeat_region complement(18992638..18992918) FT /rpt_family="AluSx" FT repeat_region 18993013..18993161 FT /rpt_family="MER3" FT repeat_region 18993162..18993464 FT /rpt_family="AluSx" FT repeat_region complement(18993507..18993799) FT /rpt_family="AluY" FT repeat_region complement(18993806..18993932) FT /rpt_family="FLAM_A" FT repeat_region complement(18994024..18994194) FT /rpt_family="MER33" FT repeat_region 18994196..18994361 FT /rpt_family="FRAM" FT misc_feature complement(18994896..18995055) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT repeat_region complement(18995227..18995515) FT /rpt_family="AluY" FT repeat_region complement(18995522..18995824) FT /rpt_family="AluSx" FT repeat_region complement(18995831..18995995) FT /rpt_family="L1MC2" FT repeat_region complement(18996038..18996305) FT /rpt_family="AluJo" FT repeat_region complement(18996327..18996627) FT /rpt_family="AluSg" FT repeat_region 18996933..18997076 FT /rpt_family="AluJb" FT repeat_region 18997077..18997383 FT /rpt_family="AluY" FT repeat_region 18997800..18998306 FT /rpt_family="L1MB6" FT repeat_region 18998313..18998571 FT /rpt_family="AluSq" FT repeat_region complement(18998617..18998837) FT /rpt_family="L1MB3" FT repeat_region 18998897..18999177 FT /rpt_family="AluSx" FT repeat_region 18999178..18999348 FT /rpt_family="AluSg/x" FT repeat_region 18999358..18999657 FT /rpt_family="AluSp" FT repeat_region complement(18999699..19000000) FT /rpt_family="AluSx" FT repeat_region complement(19000238..19000538) FT /rpt_family="AluJb" FT repeat_region 19000655..19000770 FT /rpt_family="LINE2" FT repeat_region 19000904..19000954 FT /rpt_family="LINE2" FT repeat_region 19000992..19001252 FT /rpt_family="LINE2" FT repeat_region 19001305..19001609 FT /rpt_family="AluJo" FT repeat_region 19001651..19001946 FT /rpt_family="AluSx" FT repeat_region complement(19002406..19002674) FT /rpt_family="AluJb" FT repeat_region complement(19002703..19003005) FT /rpt_family="AluSx" FT repeat_region 19003142..19003438 FT /rpt_family="AluY" FT repeat_region 19003515..19003558 FT /rpt_family="LINE2" FT repeat_region complement(19003725..19004021) FT /rpt_family="AluY" FT repeat_region complement(19004023..19004168) FT /rpt_family="AluJo/FRAM" FT misc_feature complement(19004225..19004384) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 99.000" FT misc_feature complement(19006453..19006881) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 72.000" FT repeat_region complement(19006651..19006810) FT /rpt_family="GC_rich" FT repeat_region complement(19006847..19006968) FT /rpt_family="(CGG)n" FT repeat_region 19006962..19007072 FT /rpt_family="(CGGG)n" FT repeat_region complement(19007173..19007267) FT /rpt_family="GC_rich" FT repeat_region 19008152..19008562 FT /rpt_family="LINE2" FT repeat_region complement(19008619..19008911) FT /rpt_family="AluSx" FT misc_feature complement(19010320..19010535) FT /note="DDS similarity to overlapping ESTs:~(27911..27696) FT AA102451 zn38b04.s1 Stratagene endothelial cell 937223 Homo FT sapiens cDNA clone 549679 3' similar to TR:G440389 G440389 FT EPSILON-COP; (212..1); 94% identity.~~(27911..27700) N24774 FT yx56g07.s1 Homo sapiens cDNA clone 265788 3'. (210..1); 95% FT identity.~~(27911..27706) F17431|HSPD01971 H.sapiens EST FT sequence (008-T2-27) from skeletal muscle; (123..325); 99% FT identity.~~(27911..27712) AA088664 zl83a07.s1 Stratagene FT colon (#937204) Homo sapiens cDNA clone 511188 3' similar FT to TR:G440389 G440389 EPSILON-COP; (198..1); 96% FT identity.~~(27911.27718) AA205564 zq68a08.s1 Stratagene FT neuroepithelium (#937231) Homo sapiens cDNA clone 646742 3' FT similar to TR:G525196 G525196 EPSILON-COP, LDLFP; (191..1); FT 95% identity.~~Additional EST matches:~AA969529, AA971044, FT AA974441, AI004901, T58022, AA971121, F01865, AA968695, FT AA995822, AA976926, F02931,AA148225 and many others." FT CDS complement(join(19010488..19010535,19010682..19010756, FT 19011190..19011258,19014077..19014232,19015580..19015661, FT 19016385..19016438,19017769..19017921,19021780..>19021880)) FT /codon_start=1 FT /product="COPE_HUMAN" FT /note="COATOMER EPSILON SUBUNIT; EPSILON-COAT PROTEIN; FT EPSILON-COP; LDLF" FT /protein_id="AAC24612.1" FT /translation="RKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREM FT SRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARK FT ELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACH FT MAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHP FT FIKEYQAKENDFDRLVLQYAPSA" FT misc_feature complement(19010682..19010756) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA102451 zn38b04.s1 FT Stratagene endothelial cell 937223 Homo sapiens cDNA clone FT 549679 3' similar to TR:G440389 G440389 EPSILON-COP; FT (287..213); 100% identity.~~N24774 yx56g07.s1 Homo sapiens FT cDNA clone 265788 3'. (285..211); 100% FT identity.~~F17431|HSPD01971 H.sapiens EST sequence FT (008-T2-27) from skeletal muscle; (44..118); 100% FT identity.~~AA088664 zl83a07.s1 Stratagene colon (#937204) FT ~Homo sapiens cDNA clone 511188 3' similar to TR:G440389 FT G440389 EPSILON-COP; (273..199); 100% identity.~~AA205564 FT zq68a08.s1 Stratagene neuroepithelium (#937231) Homo FT sapiens cDNA clone 646742 3' similar to TR:G525196 G525196 FT EPSILON-COP, LDLFP; (266..192); 100% identity.~~AA397788 FT zt88d11.r1 Soares testis NHT Homo sapiens cDNA clone 729429 FT 5' similar to TR:G440389 G440389 EPSILON-COP; (419..493); FT 100% identity.~~~Additional EST matches:~AA971121, F02931, FT T58022, AA974441, AA995822, AA971044, AA968695, AA969529, FT AI004901, AA148225, and others." FT misc_feature complement(19011190..19011258) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA102451 zn38b04.s1 FT Stratagene endothelial cell 937223 Homo sapiens cDNA clone FT 549679 3' similar to TR:G440389 G440389 EPSILON-COP; FT (355..288); 97% identity.~~N24774 yx56g07.s1 Homo sapiens FT cDNA clone 265788 3'. (355..286); 94% identity. ~~AA088664 FT zl83a07.s1 Stratagene colon (#937204) ~Homo sapiens cDNA FT clone 511188 3' similar to TR:G440389 G440389 EPSILON-COP; FT (342..274); 99% identity.~~AA397788 zt88d11.r1 Soares FT testis NHT Homo sapiens cDNA clone 729429 5' similar to FT TR:G440389 G440389 EPSILON-COP; (350..418); 100% FT identity.~~(28608..28566) F17431|HSPD01971 H.sapiens EST FT sequence (008-T2-27) from skeletal muscle; (1..43); 88% FT identity.~~AA205564 zq68a08.s1 Stratagene neuroepithelium FT (#937231) Homo sapiens cDNA clone 646742 3' similar to FT TR:G525196 G525196 EPSILON-COP, LDLFP; (335..267); 97% FT identity.~~Additional EST matches:~T58022, AI004901, FT AA995822, AA971044, AA974441, AA971121, AA976926, AA968695, FT AA148225, and others." FT repeat_region 19011440..19011469 FT /rpt_family="MIR" FT repeat_region 19012457..19012609 FT /rpt_family="AluJo" FT repeat_region 19012708..19013008 FT /rpt_family="AluY" FT repeat_region 19013013..19013149 FT /rpt_family="AluJo" FT repeat_region 19013192..19013493 FT /rpt_family="AluSx" FT repeat_region 19013497..19013640 FT /rpt_family="(GGAA)n" FT misc_feature complement(19014077..19014232) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 97.000~~DDS similarity FT to overlapping ESTs:~AA102451 zn38b04.s1 Stratagene FT endothelial cell 937223 Homo sapiens cDNA clone 549679 3' FT similar to TR:G440389 G440389 EPSILON-COP; (511..356); 93% FT identity.~~AA397788 zt88d11.r1 Soares testis NHT Homo FT sapiens cDNA clone 729429 5' similar to TR:G440389 G440389 FT EPSILON-COP; (194..349); 99% identity.~~(31563..31453) FT N24774 yx56g07.s1 Homo sapiens cDNA clone 265788 3'. FT (466..356); 96% identity.~~(31542..31453) AA088664 FT zl83a07.s1 Stratagene colon (#937204) Homo sapiens cDNA FT clone 511188 3' similar to TR:G440389 G440389 EPSILON-COP; FT (431..343); 93% identity.~~Additional EST FT matches:~AA976926, AA968695, AA963071, AA981126, AA148225" FT repeat_region complement(19014781..19015073) FT /rpt_family="AluSp" FT misc_feature complement(19015580..19015661) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA205564 zq68a08.s1 FT Stratagene neuroepithelium (#937231) Homo sapiens cDNA FT clone 646742 3' similar to TR:G525196 G525196 EPSILON-COP, FT LDLFP; (418..336); 99% identity.~~AA397788 zt88d11.r1 FT Soares testis NHT Homo sapiens cDNA clone 729429 5' similar FT to TR:G440389 G440389 EPSILON-COP; (112..193); 100% FT identity ~~(33009..32956) AA102451 zn38b04.s1 Stratagene FT endothelial cell 937223 Homo sapiens cDNA clone 549679 3' FT similar to TR:G440389 G440389 EPSILON-COP; (565..512); 89% FT identity." FT misc_feature complement(19016385..19016438) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA205564 zq68a08.s1 FT Stratagene neuroepithelium (#937231) Homo sapiens cDNA FT clone 646742 3' similar to TR:G525196 G525196 EPSILON-COP, FT LDLFP; (472..419); 100% identity.~~AA156391 zo54c11.r1 FT Stratagene pancreas (#937208) Homo sapiens cDNA clone FT 590708 5' similar to TR:G525196 EPSILON-COP, LDLFP; FT (253..308); 100% identity.~~(33871..33761) AA397788 FT zt88d11.r1 Soares testis NHT Homo sapiens cDNA clone 729429 FT 5' similar to TR:G440389 G440389 EPSILON-COP; (1.. 111); FT 100% identity." FT repeat_region complement(19016997..19017163) FT /rpt_family="AluJb" FT misc_feature complement(19017769..19017921) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA205564 zq68a08.s1 FT Stratagene neuroepithelium (#937231) Homo sapiens cDNA FT clone 646742 3' similar to TR:G525196 G525196 EPSILON-COP, FT LDLFP; (618..473); 89% identity.~~AA156391 zo54c11.r1 FT Stratagene pancreas (#937208) Homo sapiens cDNA clone FT 590708 5' similar to TR:G525196 EPSILON-COP, LDLFP; FT (100..252); 100% identity." FT repeat_region 19018959..19019245 FT /rpt_family="AluJb" FT repeat_region 19019266..19019323 FT /rpt_family="AluJb" FT repeat_region complement(19019325..19019625) FT /rpt_family="AluY" FT repeat_region 19019627..19019824 FT /rpt_family="AluJb" FT repeat_region complement(19020062..19020320) FT /rpt_family="MLT1C" FT repeat_region complement(19020329..19020621) FT /rpt_family="AluSx" FT repeat_region complement(19020633..19020802) FT /rpt_family="MLT1C" FT repeat_region 19021150..19021413 FT /rpt_family="AluSx" FT repeat_region complement(19021571..19021637) FT /rpt_family="MIR" FT misc_feature complement(19021780..19021880) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 93.000~~(39254.39156) FT DDS similarity to AA156391 zo54c11.r1 Stratagene pancreas FT (#937208) Homo sapiens cDNA clone 590708 5' similar to FT TR:G525196 G525196 EPSILON-COP, LDLFP; (1..99); 100% FT identity.~~Additional EST matches:~T30170, T08752" FT misc_feature complement(19022050..19022182) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 83.000" FT repeat_region complement(19022365..19022602) FT /rpt_family="AluY" FT gene complement(<19017769..19030157) FT /map="19p12" FT /gene="Epsilon- COP" FT /note="clathrin-ordered protein; identified by sequence FT homology to Cricetulus griseus epsilon-COP mRNA (Z32554)" FT CDS complement(join(<19017769..19017921,19021780..19021880, FT 19023793..19023855,19030032..19030157)) FT /codon_start=1 FT /gene="Epsilon- COP" FT /product="epsilon-COP" FT /note="clathrin -ordered protein; Identified through FT sequence homology to epsilon-COP product from C.griseus FT (87% identity; Z32554) and B. taurus (89% identity; FT X76980).~Human EST matches: AA143411, AA205346, AA312499, FT AA488261" FT /protein_id="AAB81543.1" FT /translation="MAPPAPGPASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLSS FT PERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAEL FT DREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLE" FT repeat_region complement(19022365..19023241) FT /rpt_family="Alu" FT repeat_region 19023290..19023565 FT /rpt_family="Alu" FT repeat_region 19025067..19025344 FT /rpt_family="Alu" FT repeat_region 19025459..19025537 FT /rpt_family="Alu" FT repeat_region complement(19025565..19025825) FT /rpt_family="Alu" FT repeat_region 19025867..19026038 FT /rpt_family="Alu" FT repeat_region 19026839..19027771 FT /rpt_family="Alu" FT repeat_region complement(19027801..19027979) FT /rpt_family="MLT1" FT repeat_region complement(19028178..19028471) FT /rpt_family="Alu" FT repeat_region 19028727..19029012 FT /rpt_family="Alu" FT repeat_region complement(19029288..19029528) FT /rpt_family="Alu" FT CDS join(19030551..19030665,19031389..19031512, FT 19032472..19032557,19032652..19032773,19033135..19033322, FT 19033413..19033553,19035042..19035117,19035432..19035508, FT 19035691..19035788,19037112..19037186,19038575..19038663, FT 19038774..19038845,19038937..19039125) FT /codon_start=1 FT /product="R27090_2" FT /note="Hypothetical 56kDa human ATP-dependent RNA helicase; FT Putative ATP-dependent RNA helicase of DEAD box family. FT Most similar (57% identical)to probable ATP-dependent RNA FT helicase Dbp45A (S38329)- fruit fly (Drosophila FT melanogaster)~Human EST matches: AA534472, H08289, FT AA464032, AA196836, AA569862, AA573466, AA464741, W46150, FT AA535538, AA488261, W46162, R00974, AA378518, R26194, FT R15246, AA359638, etc.~Mouse EST matches: FT AA271508~Drosophila EST matches: AA540379~Rat EST match: FT H35240" FT /protein_id="AAB81544.1" FT /translation="MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGC FT AKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCII FT VGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCT FT DFTVDLEAILAAVPARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQR FT YLLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSM FT MKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTA FT RAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKL FT EAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKNRRFKEKVEETLKRQKAGR FT AGHKGRPPRTPSGSHSGPVPSQGLV" FT repeat_region 19031679..19031964 FT /rpt_family="Alu" FT repeat_region 19034070..19034301 FT /rpt_family="Alu" FT repeat_region complement(19034619..19034907) FT /rpt_family="Alu" FT repeat_region 19035947..19036369 FT /rpt_family="Alu" FT repeat_region 19037611..19038388 FT /rpt_family="Alu" FT misc_feature complement(19039144..19039217) FT /note="BLASTN similarity to Z41188 (216..289); match: 0.85, FT score: 3.5e-33; database searched: est; H. sapiens partial FT cDNA sequence" FT misc_feature complement(19039178..19039438) FT /note="BLASTN similarity to T16014 (1..261); match: 0.94, FT score: 1.1e-90; database searched: est; IB2449 Infant FT brain, Bento Soares Homo sapiens cDNA 3'end." FT misc_feature complement(19039182..19039392) FT /note="BLASTN similarity to Z41188 (42..252); match: 0.92, FT score: 8.5e-89; database searched: est; H. sapiens partial FT cDNA sequence" FT misc_feature complement(19039366..19039432) FT /note="BLASTN similarity to Z41188 (1..67); match: 0.94, FT score: 8.5e-89; database searched: est; H. sapiens partial FT cDNA sequence" FT CDS complement(join(19040252..19040443,19042134..19042220, FT 19042318..19042434,19042785..19042941,19043733..19043854, FT 19045073..19045219,19049162..19049293,19049537..19049693, FT 19049778..19049791)) FT /codon_start=1 FT /product="R27090_3" FT /note="Hypothetical 41.3 kDa human protein most similar to FT Vesl and GLGF proteins of rat; Residues 1-128 of FT hypothetical protein R27090_3 are 81% identical to Rat GLGF FT protein (U92079) and 83% identical to Rat Vesl protein FT (AB003726); both proteins are expressed in brain and FT upregulated during seizures.~Human EST matches: W42820, FT AA121538, W42730, AA127702~Mouse EST matches: AA407944, FT AA408331, AA013888, AA035853, AA212542~Drosophila EST FT matches: AA391781, AA202338, AA201147, AA202832,AA246370" FT /protein_id="AAB81545.1" FT /translation="MSTAREQPIFSTRAHVFQIDPATKRNWIPAGKHALTVSYFYDATR FT NVYRIISIGGAKAIINSTVTPNMTFTKTSQKFGQWADSRANTVYGLGFASEQHLTQFAE FT KFQEVKEAARLAREKSQDGGELTSPALGLASHQVSTPYSPMPAWAPVPPSPLVSANGPG FT EEKLFRSQSADAPGPTERERLKKMLSEGSVGEVQWEAEFFALQDSNNKLAGALREANAA FT AAQWRQQLEAQRAEAERLRQRVAELEAQAASEVTPTGEKEGLGQGQSLEQLEALVQTKD FT QEIQTLKSQTGGPREALEAAEREETQQKVQDLETRNAELEHQLRAMERSLEEARAERER FT ARAEVGRAAQLLDVSLFELSELREGLARLAEAAP" FT repeat_region complement(19040635..19040783) FT /rpt_family="Alu" FT repeat_region 19040798..19041074 FT /rpt_family="Alu" FT repeat_region 19041100..19041833 FT /rpt_family="Alu" FT repeat_region complement(19044521..19044814) FT /rpt_family="Alu" FT repeat_region complement(19045492..19045651) FT /rpt_family="Alu" FT repeat_region complement(19045676..19045930) FT /rpt_family="Alu" FT repeat_region complement(19045944..19046232) FT /rpt_family="Alu" FT repeat_region 19046547..19047488 FT /rpt_family="Alu" FT repeat_region 19047517..19048134 FT /rpt_family="Alu" FT repeat_region 19048224..19048498 FT /rpt_family="Alu" FT repeat_region 19048730..19048987 FT /rpt_family="Alu" FT repeat_region 19050003..19050260 FT /rpt_family="Alu" FT repeat_region 19051821..19052114 FT /rpt_family="TAR1" FT repeat_region complement(19053104..19053388) FT /rpt_family="Alu" FT repeat_region complement(19053818..19053928) FT /rpt_family="Alu" FT repeat_region 19054881..19055350 FT /rpt_family="Alu" FT repeat_region complement(19055838..19056136) FT /rpt_family="AluSc" FT repeat_region 19056220..19056369 FT /rpt_family="MIR" FT repeat_region complement(19056378..19056677) FT /rpt_family="AluSx" FT repeat_region complement(19056703..19057004) FT /rpt_family="AluJb" FT misc_feature complement(19057896..19058002) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 68.000" FT repeat_region 19058167..19058468 FT /rpt_family="AluSg" FT repeat_region complement(19058518..19058814) FT /rpt_family="AluSx" FT repeat_region complement(19058998..19059240) FT /rpt_family="LINE2" FT repeat_region complement(19060235..19060537) FT /rpt_family="AluY" FT repeat_region complement(19060543..19060837) FT /rpt_family="AluJo" FT repeat_region complement(19060841..19060895) FT /rpt_family="MIR" FT repeat_region 19060910..19061041 FT /rpt_family="AluSq/x" FT repeat_region 19061046..19061346 FT /rpt_family="AluY" FT repeat_region 19061362..19061666 FT /rpt_family="AluSx" FT repeat_region 19061667..19061965 FT /rpt_family="AluY" FT repeat_region 19061976..19062277 FT /rpt_family="AluSx" FT repeat_region 19062449..19062491 FT /rpt_family="MIR" FT repeat_region complement(19062694..19062933) FT /rpt_family="LINE2" FT repeat_region complement(19062935..19063118) FT /rpt_family="AluJb" FT repeat_region 19063130..19063426 FT /rpt_family="AluSx" FT repeat_region 19063436..19063481 FT /rpt_family="Alu" FT repeat_region 19063713..19064014 FT /rpt_family="AluSx" FT repeat_region 19064022..19064196 FT /rpt_family="AluJo" FT repeat_region complement(19064952..19065014) FT /rpt_family="(TGGA)n" FT repeat_region complement(19065020..19065138) FT /rpt_family="(TGGA)n" FT repeat_region complement(19065495..19065618) FT /rpt_family="(TGGA)n" FT repeat_region complement(19065683..19065945) FT /rpt_family="(TGGA)n" FT repeat_region complement(19065975..19066087) FT /rpt_family="(TGGA)n" FT repeat_region complement(19066090..19066210) FT /rpt_family="(TGGA)n" FT repeat_region 19066578..19066694 FT /rpt_family="MIR" FT repeat_region 19066844..19067144 FT /rpt_family="AluJb" FT repeat_region complement(19067243..19067410) FT /rpt_family="AluSx" FT repeat_region complement(19067411..19067715) FT /rpt_family="AluSg" FT repeat_region complement(19067716..19067850) FT /rpt_family="AluSx" FT repeat_region 19068085..19068129 FT /rpt_family="LINE2" FT repeat_region complement(19068196..19068223) FT /rpt_family="POLY_A" FT repeat_region complement(19068414..19068712) FT /rpt_family="AluSx" FT repeat_region complement(19068745..19069067) FT /rpt_family="7SLRNA" FT repeat_region 19069242..19069367 FT /rpt_family="FLAM_C" FT repeat_region complement(19069375..19069653) FT /rpt_family="AluSx" FT repeat_region complement(19069887..19070185) FT /rpt_family="AluSx" FT repeat_region 19070224..19070526 FT /rpt_family="AluJo" FT repeat_region 19070536..19070818 FT /rpt_family="AluJb" FT repeat_region 19070850..19071148 FT /rpt_family="AluSx" FT repeat_region complement(19071295..19071363) FT /rpt_family="AluJ/FLAM" FT repeat_region complement(19071371..19071403) FT /rpt_family="MIR" FT repeat_region complement(19071478..19071647) FT /rpt_family="AluSg/x" FT repeat_region complement(19071648..19071951) FT /rpt_family="AluY" FT repeat_region complement(19071952..19072250) FT /rpt_family="AluSx" FT repeat_region 19073125..19073249 FT /rpt_family="LINE2" FT repeat_region 19073417..19073715 FT /rpt_family="AluSx" FT repeat_region 19073776..19074076 FT /rpt_family="AluSq" FT repeat_region 19074211..19074511 FT /rpt_family="AluSx" FT repeat_region 19074530..19074829 FT /rpt_family="AluJo" FT repeat_region 19074832..19075128 FT /rpt_family="AluSq" FT repeat_region 19075129..19075205 FT /rpt_family="(CAA)n" FT repeat_region 19075228..19075335 FT /rpt_family="AluY" FT repeat_region 19075303..19075396 FT /rpt_family="LTR9" FT repeat_region complement(19075403..19075702) FT /rpt_family="AluSq" FT repeat_region complement(19075703..19075991) FT /rpt_family="AluSg" FT repeat_region complement(19076014..19076315) FT /rpt_family="AluSq" FT repeat_region 19076326..19076503 FT /rpt_family="LTR9" FT repeat_region 19076519..19076786 FT /rpt_family="AluSq" FT repeat_region 19076790..19076850 FT /rpt_family="LTR9" FT repeat_region 19076853..19077142 FT /rpt_family="AluSg" FT repeat_region 19077160..19077255 FT /rpt_family="LTR9" FT repeat_region 19077238..19077499 FT /rpt_family="LTR9" FT repeat_region 19077513..19077604 FT /rpt_family="AluJb" FT repeat_region 19077605..19077906 FT /rpt_family="AluSx" FT repeat_region 19077910..19078229 FT /rpt_family="AluSx" FT repeat_region 19078610..19078653 FT /rpt_family="(TAAA)n" FT repeat_region 19078872..19078920 FT /rpt_family="MIR" FT repeat_region complement(19078928..19078955) FT /rpt_family="AT_rich" FT repeat_region complement(19078956..19079219) FT /rpt_family="AluSg" FT repeat_region 19079244..19079334 FT /rpt_family="L1" FT repeat_region 19079462..19079571 FT /rpt_family="FLAM_C" FT repeat_region complement(19079596..19079889) FT /rpt_family="AluSx" FT repeat_region complement(19079890..19079967) FT /rpt_family="MLT1A1" FT repeat_region complement(19080104..19080404) FT /rpt_family="AluSx" FT repeat_region complement(19080408..19080699) FT /rpt_family="MER44C" FT repeat_region complement(19080692..19080884) FT /rpt_family="MER44A" FT repeat_region 19080912..19081207 FT /rpt_family="AluJo" FT repeat_region complement(19081306..19081604) FT /rpt_family="AluSx" FT repeat_region complement(19081696..19081757) FT /rpt_family="(CA)n" FT repeat_region complement(19081787..19082088) FT /rpt_family="AluSq" FT repeat_region 19082162..19082454 FT /rpt_family="AluSx" FT repeat_region complement(19082466..19082511) FT /rpt_family="Alu" FT repeat_region complement(19082517..19082730) FT /rpt_family="AluSq" FT repeat_region complement(19082739..19083041) FT /rpt_family="AluSq" FT repeat_region complement(19083505..19083809) FT /rpt_family="AluJb" FT repeat_region 19084120..19084236 FT /rpt_family="AluJb" FT repeat_region complement(19084301..19084600) FT /rpt_family="AluSp" FT repeat_region complement(19084613..19084782) FT /rpt_family="AluSq" FT repeat_region complement(19084783..19085065) FT /rpt_family="AluY" FT repeat_region complement(19085125..19085337) FT /rpt_family="AluSx" FT repeat_region complement(19085352..19085652) FT /rpt_family="AluSg" FT repeat_region 19085728..19086046 FT /rpt_family="AluJo" FT repeat_region 19086190..19086481 FT /rpt_family="AluSx" FT repeat_region 19086491..19086783 FT /rpt_family="AluSx" FT repeat_region 19087046..19087342 FT /rpt_family="AluSx" FT repeat_region complement(19087362..19087395) FT /rpt_family="AT_rich" FT repeat_region complement(19087398..19087527) FT /rpt_family="FLAM_C" FT repeat_region 19087528..19087589 FT /rpt_family="MLT2E" FT repeat_region complement(19087598..19087898) FT /rpt_family="AluSp" FT repeat_region 19087899..19088074 FT /rpt_family="MLT2E" FT repeat_region complement(19088077..19088348) FT /rpt_family="AluJo" FT repeat_region 19088377..19088460 FT /rpt_family="MLT2CB" FT repeat_region complement(19088523..19088823) FT /rpt_family="AluSx" FT repeat_region 19089202..19089495 FT /rpt_family="AluSx" FT repeat_region 19089593..19090048 FT /rpt_family="L1MB6" FT repeat_region 19090058..19090359 FT /rpt_family="AluSx" FT repeat_region 19090431..19090626 FT /rpt_family="AluJo" FT repeat_region complement(19090631..19090702) FT /rpt_family="LINE2" FT repeat_region complement(19090759..19090928) FT /rpt_family="AluSg" FT repeat_region complement(19090929..19091229) FT /rpt_family="AluY" FT repeat_region complement(19091230..19091361) FT /rpt_family="AluSg" FT repeat_region complement(19091853..19092148) FT /rpt_family="AluSx" FT repeat_region complement(19092234..19092270) FT /rpt_family="MIR" FT repeat_region complement(19092344..19092617) FT /rpt_family="AluSq" FT repeat_region complement(19092627..19092915) FT /rpt_family="AluJo" FT repeat_region 19092979..19093279 FT /rpt_family="AluSp" FT repeat_region 19093896..19094192 FT /rpt_family="AluJb" FT repeat_region 19094274..19094314 FT /rpt_family="MIR" FT repeat_region 19094469..19094783 FT /rpt_family="AluSx" FT repeat_region 19094784..19094816 FT /rpt_family="(GAA)n" FT repeat_region 19095388..19095455 FT /rpt_family="AluSp" FT repeat_region 19095388..19095551 FT /rpt_family="FRAM" FT repeat_region complement(19095568..19095860) FT /rpt_family="AluSx" FT repeat_region 19095861..19096067 FT /rpt_family="AluJb" FT repeat_region 19096068..19096104 FT /rpt_family="(TGAA)n" FT repeat_region complement(19096178..19096234) FT /rpt_family="MIR" FT repeat_region complement(19096568..19096863) FT /rpt_family="AluJo" FT repeat_region complement(19096871..19096932) FT /rpt_family="MIR" FT repeat_region complement(19097005..19097303) FT /rpt_family="AluSq" FT repeat_region complement(19097416..19097513) FT /rpt_family="MIR" FT misc_feature complement(19097634..19097693) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 78.000" FT repeat_region complement(19097858..19097981) FT /rpt_family="(CATA)n" FT repeat_region complement(19098212..19098435) FT /rpt_family="AluJo" FT repeat_region complement(19099543..19099670) FT /rpt_family="FRAM" FT repeat_region complement(19099677..19099977) FT /rpt_family="AluSp" FT misc_feature complement(19100015..19100320) FT /note="DDS similarity to AA372398 EST84291 Colon FT adenocarcinoma IV Homo sapiens cDNA 5' end; Score: 579 FT Identity: 303/309 (98%)." FT repeat_region 19100497..19100539 FT /rpt_family="MADE1" FT repeat_region complement(19100589..19100648) FT /rpt_family="MIR" FT misc_feature complement(19101702..19101958) FT /note="DDS similarity to overlapping ESTs:~W93047 FT zd93f07.s1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 357061 3'; (266..11); 100% identity.~~W55877 FT zc03a09.r1 Soares parathyroid tumor NbHPA Homo sapiens cDNA FT clone 321208 5'; (320..580); 98% identity.~" FT misc_feature 19101703..19102889 FT /note="DDS similarity to overlapping ESTs:~(14988..15461) FT AA281628 zt03d01.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:712033 3'; Score: 926 Identity: 471/472 FT (99%).~~(14988..15490) AA417963 zv97b07.s1 Soares NhHMPu S1 FT Homo sapiens cDNA clone 767701 3'; Score: 976 Identity: FT 498/501 (99%).~~(14988..15495) AA290608 zs45d01.s1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:700417 3'; FT Score: 981 Identity: 503/505 (99%).~~(15561..15070) FT AA446216 zw66f11.r1 Soares testis NHT Homo sapiens cDNA FT clone 781197 5'; Score: 933 Identity: 483/489 FT (98%).~~(15662..15079) AA418140 zv97b06.r1 Soares NhHMPu S1 FT Homo sapiens cDNA clone 767699 5'; Score: 1156 Identity: FT 583/586 (99%).~~(16174..15655) AA290720 zs44c02.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:700322 5'; FT Score: 1036 Identity: 519/520 (99%)." FT repeat_region complement(19102862..19103157) FT /rpt_family="AluSc" FT repeat_region complement(19103158..19103460) FT /rpt_family="AluSx" FT mRNA complement(19103176..19136727) FT /product="KIAA0365 [homo sapiens]" FT /note="Novel mRNA isolated from human male brain" FT misc_feature complement(19103829..19104094) FT /note="BLASTN similarity to T49932 (1..267); match: 0.89, FT score: 7.8e-97; database searched: est; ya99d09.r1 Homo FT sapiens cDNA clone 69809 5'.~~(17158..17379) BLASTN FT similarity to T49998 (1..225); match: 0.93, score: 2.8e-71; FT database searched: est; yb04c02.r2 Homo sapiens cDNA clone FT 70178 5'." FT misc_feature complement(19104135..19104274) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 62.000" FT misc_feature 19104379..19104815 FT /note="DDS similarity to AA280842 zs99f06.s1 NCI_CGAP_GCB1 FT Homo sapiens cDNA clone IMAGE:711779 3'; Score: 854 FT Identity: 435/437 (99%).~~(18022..17802) BLASTN similarity FT to T08398 (1..220); match: 0.96, score: 1.4e-47; database FT searched: est; EST06289 Homo sapiens cDNA clone HIBBD74 5' FT end." FT misc_feature complement(19104736..19104823) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 66.000" FT misc_feature complement(19105175..19105295) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 89.000~~DDS similarity FT to overlapping ESTs:~W93047 zd93f07.s1 Soares fetal heart FT NbHH19W Homo sapiens cDNA clone 357061 3' (388..267); 99% FT identity.~~W55877 zc03a09.r1 Soares parathyroid tumor NbHPA FT Homo sapiens cDNA clone 321208 5'; (198..320); 99% FT identity.~~BLASTN similarity to AA839050 (111..233); match: FT 0.76, score: 4.0e-39; database searched: month.na; FT vw47a01.r1 Soares mouse mammary gland NbMMG Mus musculus FT cDNA clone 1246920 5'~" FT CDS complement(join(19105802..19106089,19112422..19112483, FT 19114977..19115455,19119126..19119237,19120664..19121151, FT 19129918..19130038,19135428..>19136727)) FT /codon_start=1 FT /product="KIAA0365" FT /note="Novel human transcript identified in brain" FT /protein_id="AAC06129.1" FT /translation="WEQDFGHPVSQESSWSQEYSFGPSAVLGDFGSSRLIEKECLEKES FT RDYDVDHPGEADSVLRGGSQVQARGRALNIVDQEGSLLGKGETQGLLTAKGGVGKLVTL FT RNVSTKKIPTVNRITPKTQGTNQIQKNTPSPDVTLGTNPGTEDIQFPIQKIPLGLDLKN FT LRLPRRKMSFDIIDKSDVFSRFGIEIIKWAGFHTIKDDIKFSQLFQTLFELETETCAKM FT LASFKCSLKPEHRDFCFFTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFEIIKP FT FDKYIMRLQDRLLKSVTPLLMACNAYELSVKMKTLSNPLDLALALETTNSLCRKSLALL FT GQTFSLASSFRQEKILEAVGLQDIAPSPAAFPNFEDSTLFGREYIDHLKAWLVSSGCPL FT QVKKAEPEPMREEEKMIPPTKPEIQAKAPSSLSDAVPQRADHRVVGTIDQLVKRVIEGS FT LSPKERTLLKEDPAYWFLSDENSLEYKYYKLKLAEMQRMSENLRGADQKPTSADCAVRA FT MLYSRAVRNLKKKLLPWQRRGLLRAQGLRGWKARRATTGTQTLLSSGTRLKHHGRQAPG FT LSQAKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGPSPKPAGVDISEAPQTSSPCPSA FT DIDMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFEL FT CPSICFTSSPHNLHTGGGDTTGSQESPVDLMEGEAEFEDEPPPREAELESPEVMPEEED FT EDDEDGGEEAPAPGGAGKSEGSTPADGLPGEAAEDDLAGAPALSQASSGTCFPRKRISS FT KSLKVGMIPAPKRVCLIQEPKVHEPVRIAYDRPRGRPMSKKKKPKDLDFAQQKLTDKNL FT GFQMLQKMGWKEGHGLGSLGKGIREPVSVYAAGSLGWEWVGPQSFHLQPAAWLLHSQDG FT LQLAVDFCFLNRRHLQMRS" FT misc_feature complement(19105953..19106089) FT /note="DDS similarity to overlapping ESTs:~W93047 FT zd93f07.s1 Soares fetal heart NbHH19W Homo sapiens cDNA FT clone 357061 3'; (528..389); 95% identity.~~W55877 FT zc03a09.r1 Soares parathyroid tumor NbHPA Homo sapiens cDNA FT clone 321208 5'; (62..197); 99% identity.~~(19260..19348) FT BLASTN similarity to AA839050 (1..89); match: 0.84, score: FT 4.0e-39; database searched: month.na; vw47a01.r1 Soares FT mouse mammary gland NbMMG Mus musculus cDNA clone 1246920 FT 5'~~(19374..19217) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 100.000~" FT repeat_region 19106924..19107222 FT /rpt_family="AluSx" FT repeat_region complement(19107235..19107358) FT /rpt_family="FLAM_A" FT repeat_region complement(19107367..19107663) FT /rpt_family="AluSx" FT repeat_region 19108087..19108167 FT /rpt_family="(GGGA)n" FT repeat_region 19108312..19108611 FT /rpt_family="AluSg" FT repeat_region complement(19109103..19109254) FT /rpt_family="FRAM" FT repeat_region complement(19109386..19109477) FT /rpt_family="(CA)n" FT misc_feature complement(19109733..19109794) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 53.000" FT repeat_region complement(19110163..19110317) FT /rpt_family="MIR" FT repeat_region 19110641..19110759 FT /rpt_family="LINE2" FT repeat_region complement(19111394..19111508) FT /rpt_family="AluJb" FT repeat_region complement(19111520..19111803) FT /rpt_family="AluJb" FT repeat_region complement(19111824..19112124) FT /rpt_family="AluY" FT misc_feature complement(19112422..19112483) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 89.000~~DDS similarity FT to:~(25767..25707) W55877 zc03a09.r1 Soares parathyroid FT tumor NbHPA Homo sapiens cDNA clone 321208 5'; (1..61); FT 100% identity." FT repeat_region 19112907..19113205 FT /rpt_family="AluSq" FT repeat_region complement(19113320..19113620) FT /rpt_family="AluSp" FT repeat_region complement(19113787..19113915) FT /rpt_family="FLAM_C" FT repeat_region 19114248..19114492 FT /rpt_family="L1ME1" FT misc_feature complement(19115090..19115455) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 95.000~~DDS similarity FT to :~(28740..28644) A292894 zt66c07.r1 Soares testis NHT FT Homo sapiens cDNA clone 727308 5'; (363..459); 100% FT identity." FT repeat_region complement(19115190..19115229) FT /rpt_family="(GGA)n" FT repeat_region complement(19116496..19116650) FT /rpt_family="FRAM" FT repeat_region 19116651..19116728 FT /rpt_family="(CA)n" FT repeat_region 19116759..19117048 FT /rpt_family="AluSx" FT repeat_region complement(19118267..19118564) FT /rpt_family="AluSq" FT repeat_region complement(19118567..19118808) FT /rpt_family="AluSx" FT repeat_region 19118967..19119096 FT /rpt_family="FLAM_A" FT misc_feature complement(19119110..19119237) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 54.000~~DDS similarity FT to:~(32522..32411) A292894 zt66c07.r1 Soares testis NHT FT Homo sapiens cDNA clone 727308 5'; (251..362); 100% FT identity.~(32522..32414) AA436057 zu01d03.r1 Soares testis FT NHT Homo sapiens cDNA clone 730565 5'; (337..448); 100% FT identity." FT repeat_region complement(19119721..19120020) FT /rpt_family="AluSx" FT misc_feature complement(19120664..19121151) FT /note="DDS similarity to overlapping ESTs: ~(34285..33949) FT AA436057 zu01d03.r1 Soares testis NHT Homo sapiens cDNA FT clone 730565 5'; (1..336); 99% identity.~~(34199..33949) FT A292894 zt66c07.r1 Soares testis NHT Homo sapiens cDNA FT clone 727308 5'; (1..250); 97% identity.~~(34361..33999) FT AA306314 EST177278 Jurkat T-cells VI Homo sapiens cDNA 5' FT end; Score: 710 Identity: 359/363 (98%).~~(34436..34013) FT W17328 zb18h11.r1 Soares fetal lung NbHL19W Homo sapiens FT cDNA clone 302469 5'; (126..533); 93% identity." FT misc_feature complement(19120975..19121151) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 92.000~~DDS similarity FT to:~(34436..34354) Z19615|HSAAAAAVG H. sapiens putatively FT transcribed partial sequence; UK-HGMP sequence ID AAAAAVG; FT single read (85..1); 94% identity." FT repeat_region 19121668..19121962 FT /rpt_family="AluJo" FT repeat_region complement(19122020..19122256) FT /rpt_family="AluJb" FT repeat_region 19122528..19122655 FT /rpt_family="FLAM_C" FT repeat_region 19123314..19123522 FT /rpt_family="MIR" FT repeat_region complement(19123678..19123974) FT /rpt_family="AluSx" FT repeat_region complement(19124817..19125100) FT /rpt_family="AluSq" FT repeat_region 19125331..19125628 FT /rpt_family="AluJo" FT repeat_region 19125730..19126028 FT /rpt_family="AluY" FT repeat_region complement(19126029..19126053) FT /rpt_family="AT_rich" FT repeat_region complement(19126312..19126613) FT /rpt_family="AluSx" FT repeat_region complement(19126969..19127117) FT /rpt_family="AluY" FT repeat_region 19127424..19127608 FT /rpt_family="MIR" FT repeat_region 19127916..19128013 FT /rpt_family="AluJo/FRAM" FT repeat_region 19128099..19128282 FT /rpt_family="MER20" FT repeat_region 19128299..19128598 FT /rpt_family="AluSx" FT repeat_region 19128772..19128905 FT /rpt_family="AluSq/x" FT repeat_region 19129006..19129140 FT /rpt_family="AluSg/x" FT repeat_region 19129215..19129515 FT /rpt_family="AluY" FT misc_feature complement(19129914..19130086) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: marginal, score: 46.000" FT misc_feature complement(19129918..19130038) FT /note="DDS similarity to overlapping ESTs:~(43323..43203) FT W17328 zb18h11.r1 Soares fetal lung NbHL19W Homo sapiens FT cDNA clone 302469 5'; (5..125); 98% FT identity.~~(43323..43203) Z19615|HSAAAAAVG H. sapiens FT putatively transcribed partial sequence; UK-HGMP sequence FT ID AAAAAVG; single read; (205..86); 98% FT identity.~~(43323..43203) W92502 ze44c05.r1 Soares retina FT N2b4HR Homo sapiens cDNA clone 361832 5'; (346..468); 97% FT identity." FT repeat_region 19130645..19130669 FT /rpt_family="POLY_A" FT repeat_region 19130675..19130805 FT /rpt_family="AluSq/x" FT repeat_region 19130864..19130901 FT /rpt_family="(TAAA)n" FT repeat_region 19130957..19131259 FT /rpt_family="AluY" FT repeat_region complement(19131260..19131546) FT /rpt_family="AluJb" FT repeat_region 19131687..19131988 FT /rpt_family="AluSp" FT repeat_region 19132371..19132427 FT /rpt_family="L1ME" FT repeat_region complement(19132480..19132773) FT /rpt_family="AluSx" FT repeat_region complement(19132793..19133092) FT /rpt_family="AluY" FT repeat_region complement(19134128..19134300) FT /rpt_family="FAM" FT repeat_region 19134426..19134722 FT /rpt_family="AluJb" FT repeat_region complement(19134924..19135217) FT /rpt_family="AluSx" FT misc_feature complement(19135375..19137192) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 92.000~~DDS similarity FT to :~(48795..48713) Z19615|HSAAAAAVG H. sapiens putatively FT transcribed partial sequence; UK-HGMP sequence ID AAAAAVG; FT single read; (287..206); 92% identity.~~(49057..48713) FT W92502 ze44c05.r1 Soares retina N2b4HR Homo sapiens cDNA FT clone 361832 5'; (1..345); 98% identity." FT repeat_region 19137807..19137938 FT /rpt_family="FLAM_C" FT repeat_region complement(19138199..19138431) FT /rpt_family="LINE2" FT repeat_region complement(19138437..19138739) FT /rpt_family="AluSg" FT repeat_region complement(19138942..19139067) FT /rpt_family="MER5B" FT repeat_region complement(19139125..19139343) FT /rpt_family="LINE2" FT repeat_region complement(19139510..19139795) FT /rpt_family="AluSx" FT repeat_region complement(19139797..19139954) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(19139956..19140242) FT /rpt_family="AluY" FT repeat_region 19140495..19140770 FT /rpt_family="AluSg" FT repeat_region 19140842..19140974 FT /rpt_family="AluJo" FT repeat_region 19141017..19141343 FT /rpt_family="AluSq" FT repeat_region 19141450..19141614 FT /rpt_family="AluJo" FT misc_feature complement(19141799..19141891) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT repeat_region 19141936..19142055 FT /rpt_family="AluSx" FT repeat_region 19142061..19142361 FT /rpt_family="AluSx" FT repeat_region 19142367..19142523 FT /rpt_family="AluSx" FT repeat_region complement(19142640..19142725) FT /rpt_family="AluSq/x" FT repeat_region complement(19142972..19143268) FT /rpt_family="AluSq" FT repeat_region 19143829..19143868 FT /rpt_family="MIR" FT repeat_region complement(19144060..19144180) FT /rpt_family="GC_rich" FT repeat_region complement(19144216..19144313) FT /rpt_family="(CGG)n" FT misc_feature complement(19144298..19144479) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 55.000~~" FT repeat_region complement(19144352..19144437) FT /rpt_family="SUBTEL_sat" FT misc_feature 19144442..19144800 FT /note="DDS similarity to overlapping ESTs:~(57727..58085) FT AA171586 zp23b07.r1 Stratagene neuroepithelium (#937231) FT Homo sapiens cDNA clone 610261 5' (1..369); 83% FT identity.~~(57756..58024) AA071016 zm66g02.r1 Stratagene FT neuroepithelium (#937231) Homo sapiens cDNA clone 530642 FT 5'; (1..267); 95% identity." FT repeat_region complement(19144926..19144995) FT /rpt_family="LINE2" FT repeat_region complement(19145199..19145270) FT /rpt_family="LINE2" FT repeat_region complement(19145402..19145673) FT /rpt_family="AluSx" FT repeat_region complement(19145674..19145972) FT /rpt_family="AluY" FT repeat_region complement(19145973..19146112) FT /rpt_family="AluSq/x" FT repeat_region complement(19146541..19146733) FT /rpt_family="MER4A2" FT repeat_region complement(19146724..19146794) FT /rpt_family="MER4A" FT repeat_region complement(19146871..19147170) FT /rpt_family="AluSx" FT repeat_region complement(19147172..19147346) FT /rpt_family="MER4A" FT repeat_region complement(19147573..19147705) FT /rpt_family="MIR" FT repeat_region 19147713..19148008 FT /rpt_family="AluSx" FT repeat_region complement(19148184..19148444) FT /rpt_family="AluJb" FT repeat_region 19148671..19149198 FT /rpt_family="MER1A" FT repeat_region complement(19149386..19149665) FT /rpt_family="AluSq" FT repeat_region 19149706..19149736 FT /rpt_family="(CA)n" FT repeat_region complement(19149737..19149855) FT /rpt_family="FLAM_C" FT repeat_region complement(19149896..19149936) FT /rpt_family="L1MB8" FT repeat_region complement(19149945..19150245) FT /rpt_family="AluJo" FT repeat_region complement(19150252..19150604) FT /rpt_family="L1MB6" FT repeat_region complement(19150736..19150922) FT /rpt_family="MER3" FT repeat_region complement(19151261..19151386) FT /rpt_family="FLAM_A" FT repeat_region complement(19151464..19151635) FT /rpt_family="AluSg/x" FT repeat_region complement(19151704..19151943) FT /rpt_family="FLAM_C" FT repeat_region complement(19151947..19152112) FT /rpt_family="L1MC4" FT repeat_region complement(19152168..19152456) FT /rpt_family="AluSx" FT repeat_region complement(19152501..19152680) FT /rpt_family="L1MA9" FT repeat_region complement(19152719..19153006) FT /rpt_family="AluJb" FT repeat_region complement(19153160..19153333) FT /rpt_family="AluJb" FT misc_feature 19153525..19153686 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to:~(66805..66929) AA071016 zm66g02.r1 FT Stratagene neuroepithelium (#937231) Homo sapiens cDNA FT clone 530642 5' (268..397); 95% identity.~~(66807..66972) FT H14000 EST00026 Homo sapiens genomic clone C4-32 5'. Score: FT 296 Identity: 164/170 (96%).~~(66831..66971) AA613525 FT nq22d04.s1 NCI_CGAP_Co10 Homo sapiens cDNA clone FT IMAGE:1144615; (406..266); 100% identity.~~(66851..66945) FT AA106335 mm18h03.r1 Stratagene mouse diaphragm (#937303) FT Mus musculus cDNA clone 521909 5' (300..394); 82% FT identity." FT misc_feature 19154801..19154883 FT /note="DDS similarity to AA613525 nq22d04.s1 NCI_CGAP_Co10 FT Homo sapiens cDNA clone IMAGE:1144615; (265..183); 100% FT identity.~" FT repeat_region complement(19155465..19155601) FT /rpt_family="MIR" FT repeat_region complement(19155802..19155823) FT /rpt_family="AT_rich" FT repeat_region complement(19155824..19156121) FT /rpt_family="AluSx" FT repeat_region complement(19156300..19156463) FT /rpt_family="AluSg/x" FT repeat_region complement(19156464..19156759) FT /rpt_family="AluY" FT repeat_region complement(19156805..19156913) FT /rpt_family="MIR" FT repeat_region complement(19157006..19157305) FT /rpt_family="AluY" FT repeat_region complement(19157308..19157603) FT /rpt_family="AluSx" FT repeat_region complement(19157606..19157731) FT /rpt_family="AluJo/FLAM" FT repeat_region complement(19157761..19157946) FT /rpt_family="AluSg/x" FT repeat_region complement(19158510..19158734) FT /rpt_family="MER4D" FT repeat_region 19158738..19158873 FT /rpt_family="AluSx" FT repeat_region 19158874..19159175 FT /rpt_family="AluSq" FT repeat_region 19159176..19159343 FT /rpt_family="AluSx" FT repeat_region complement(19159349..19159659) FT /rpt_family="MER4D" FT CDS join(<19144471..19144739,19153520..19153686, FT 19154801..19154883,19162431..19163004,19164961..19165130, FT 19166074..19166205,19166600..19166737,19168225..19168437) FT /codon_start=1 FT /product="R30923_1" FT /note="Hypothetical human protein (partial)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD03162.1" FT /translation="AKHFPAGGGDHRERPGRGGKDASVAHEVASLALPWFAVVLGYRER FT PRVSGRPSLGAPQRLRAYGGRKGLEAAPWVTTARPTFPHVAAKTGSGASIGCTPTSTQA FT KMVSKRIAQETFDAAVRENIEEFAMGPEEAVKEAVEQFESQGVDLSNIVKTAPKVSADG FT SQEPTHDILQMLSDLQESVASSRPQEVSAYLTRFCDQCKQDKACRFLAAQKGAYPIIFT FT AWKLATAGDQGLLLQSLNALSVLTDGQPDLLDAQGLQLLVATLTQNADEADLTCSGIRC FT VRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHHTDVVREACWALRVMTFDDDIRVPFG FT HAHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAIRNEFCQEVVDLGGL FT SILVSLLADCNDHQMRDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVAAMT FT QHLTSPQVCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACML FT IRNLVAHGQAFSKPILDLGAEALIMQARSAHRDCEDVAKAALRDLGCHVELRELWTGQR FT GNLAP" FT repeat_region complement(19159872..19160180) FT /rpt_family="Alu" FT repeat_region 19160570..19160842 FT /rpt_family="Alu" FT repeat_region complement(19160970..19161319) FT /rpt_family="Alu" FT misc_feature 19162428..19162565 FT /note="BLASTN similarity to Z36779 (116..253); match: 0.92, FT score: 3.9e-41; database searched: nt; H.sapiens (xs12) FT mRNA, 268bp" FT misc_feature 19162431..19163004 FT /note="predicted exon, program: 0, frame: 0, quality: FT excellent, score: 91.000" FT misc_feature 19162505..19163004 FT /note="Multiple EST matches:~(18807..18867) DDS similarity FT to T08156 (1..317) EST06047 Homo sapiens cDNA clone HIBAC92 FT 5' end; Score: 626 Identity: 315/317 (99%)~(19207..19305) FT DDS similarity to W95148 ze04d10.r1 Soares fetal heart FT NbHH19W Homo sapiens cDNA clone 358003 5' (1..278); Score: FT 805 Identity: 452/459 (98%).~(19096..19306) DDS similarity FT to AA280709 zs98h08.r1 NCI_CGAP_GCB1 Homo sapiens cDNA FT clone 711711 5' (1..210); 99% identity.~(19115..19306) FT BLASTN similarity to Z43195 (1..192) H. sapiens partial FT cDNA sequence; score: 4.5e-64.~(19099..19306) DDS FT similarity to R20119 yg18c07.r1 Homo sapiens cDNA clone FT 32752 5' (1..214); 96% identity." FT repeat_region 19163996..19164302 FT /rpt_family="Alu" FT misc_feature 19164961..19165130 FT /note="predicted exon, program: 0, frame: 0, quality: FT excellent, score: 100.000~~Other overlapping FT matches:~(21263..21432) DDS similarity to W95148 ze04d10.r1 FT Soares fetal heart NbHH19W Homo sapiens cDNA clone 358003 FT 5' (279..457); 96% identity. Also AA280709 zs98h08.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone~ 711711 5' FT (211..379); 99% identity.~(21263..21432) DDS similarity to FT R20119 yg18c07.r1 Homo sapiens cDNA clone 32752 5' FT (215..385); 96% identity.~" FT misc_feature complement(19165189..19165497) FT /note="DDS similarity to R07227 yf14c04.r1 Homo sapiens FT cDNA clone 126822 5'(1..313). Score: 574 Identity: 305/313 FT (97%)." FT misc_feature 19166074..19166205 FT /note="predicted exon, program: 0, frame: 1, quality: FT excellent, score: 96.000~~Other overlapping FT matches:~(22376..22414) DDS similarity to AA280709 FT zs98h08.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone 711711 5' FT (380..418); 100% identity.~(22376..22462) DDS similarity to FT R20119 yg18c07.r1 Homo sapiens cDNA clone 32752 5' FT (386..480); 81% identity." FT misc_feature 19166600..19166737 FT /note="predicted exon, program: 0, frame: 2, quality: FT excellent, score: 100.000~~Other overlapping FT matches:~(22959..23039) DDS similarity to H57475 yr05g01.r1 FT Homo sapiens cDNA clone 204432 5' (1..81); 100% identity." FT repeat_region complement(19167073..19167362) FT /rpt_family="Alu" FT misc_feature 19168080..19168586 FT /note="DDS similarity to R86185 yp88h01.r1 Homo sapiens FT cDNA clone 194545 5'. Score: 770 Identity: 480/529 (90%)." FT misc_feature 19168225..19168403 FT /note="predicted exon, program: 0, frame: 1, quality: FT excellent, score: 87.000~~Other overlapping FT matches:~(24527..24881) DDS similarity to H57475 yr05g01.r1 FT Homo sapiens cDNA clone 204432 5' (82..451); 91% FT identity.~(24530..24849) DDS similarity to AA349189 FT EST55783 Infant adrenal gland II Homo sapiens cDNA 5' end FT (1..320). Score: 600 Identity: 313/320 FT (97%).~(24534..24784) DDS similarity to AA365317 EST76085 FT Pineal gland II Homo sapiens cDNA 5' end (1..257).~Score: FT 416 Identity: 237/257 (92%).~" FT misc_feature complement(19168476..19168983) FT /note="DDS similarity to AA172256 zp23b07.s1 Stratagene FT neuroepithelium (#937231) Homo sapiens cDNA clone 610261 3' FT (1..511). Score: 919 Identity: 498/511 (97%).~~Other FT overlapping matches:~(24966..25287) BLASTN similarity to FT T15554 (1..322); match: 0.73, score: 2.6e-34; database FT searched: est; IB1539 Infant brain, Bento Soares Homo FT sapiens cDNA 3'end.~~(25286..24847) AA070864 zm66g02.s1 FT Stratagene neuroepithelium (#937231) Homo sapiens cDNA FT clone 530642 3' (1..447) Score: 811 Identity: 438/447 FT (97%).~(24879..25271) AA047737 zf14e05.r1 Soares fetal FT heart NbHH19W Homo sapiens cDNA clone 376928 5'~Score: 608 FT Identity: 359/399 (89%).~(25289..24485) R42360 yg01d03.s1 FT Homo sapiens cDNA clone 31121 3'. Score: 656 Identity: FT 379/413 (91%).~~And others: AA493390, Z39273, etc." FT repeat_region 19169457..19169747 FT /rpt_family="Alu" FT repeat_region 19170546..19170632 FT /rpt_family="Alu" FT repeat_region complement(19171450..19171709) FT /rpt_family="Alu" FT misc_feature 19171729..19171823 FT /note="predicted exon, program: 0, frame: 0, quality: FT excellent, score: 81.000" FT repeat_region 19173841..19173947 FT /rpt_family="MIR" FT repeat_region complement(19176668..19176965) FT /rpt_family="Alu" FT repeat_region complement(19177263..19177548) FT /rpt_family="Alu" FT repeat_region 19177698..19177848 FT /rpt_family="Alu" FT repeat_region 19178143..19178405 FT /rpt_family="Alu" FT misc_feature 19178556..19178588 FT /note="predicted exon, program: 0, frame: 0, quality: FT excellent, score: 92.000" FT repeat_region 19178883..19179180 FT /rpt_family="Alu" FT repeat_region 19179204..19179649 FT /rpt_family="Alu" FT repeat_region 19179683..19179851 FT /rpt_family="Alu" FT repeat_region complement(19180224..19180341) FT /rpt_family="MLT1" FT repeat_region complement(19180509..19181400) FT /rpt_family="Alu" FT repeat_region complement(19181411..19181558) FT /rpt_family="MLT1" FT misc_feature complement(19181645..19181703) FT /note="predicted exon, program: 0, frame: 0, quality: good, FT score: 56.000" FT repeat_region complement(19181802..19182085) FT /rpt_family="Alu" FT repeat_region 19182402..19182697 FT /rpt_family="Alu" FT misc_feature complement(19182459..19182892) FT /note="DDS similarity to T57653 yb59g09.s1 Homo sapiens FT cDNA clone 75520 3' contains Alu repetitive element.~Score: FT 781 Identity: 428/443 (96%)." FT repeat_region complement(19182869..19182950) FT /rpt_family="Alu" FT misc_feature complement(19183098..19183129) FT /note="predicted exon, program: 0, frame: 2, quality: FT excellent, score: 100.000" FT repeat_region complement(19183192..19183481) FT /rpt_family="Alu" FT repeat_region complement(19183498..19183697) FT /rpt_family="Alu" FT repeat_region complement(19183498..19183803) FT /rpt_family="AluJb" FT repeat_region complement(19184388..19184681) FT /rpt_family="AluSx" FT repeat_region complement(19184682..19184816) FT /rpt_family="AluJb" FT misc_feature 19185026..19185365 FT /note="DDS similarity to overlapping ESTs: (11806..12145) FT T96088 ye47d12.r1 Homo sapiens cDNA clone 120887 5'. Score: FT 651 Identity: 334/339 (98%).~(11807..12138) T80652 FT yd22a06.r1 Homo sapiens cDNA clone 108946 5'. Score: 607 FT Identity: 326/335 (97%)." FT repeat_region complement(19185469..19185599) FT /rpt_family="(CA)n" FT repeat_region 19185678..19185974 FT /rpt_family="AluJo" FT misc_feature 19185873..19186392 FT /note="DDS similarity to AA311428 EST182227 Jurkat T-cells FT V Homo sapiens cDNA 5' end similar to EST containing Alu FT repeat. Score: 1024 Identity: 516/520 (99%)." FT repeat_region 19186990..19187295 FT /rpt_family="AluSx" FT repeat_region complement(19187478..19187683) FT /rpt_family="L1ME3" FT repeat_region 19187711..19188013 FT /rpt_family="AluJo" FT repeat_region complement(19188015..19188336) FT /rpt_family="L1MB3" FT repeat_region 19188416..19188707 FT /rpt_family="AluSx" FT repeat_region complement(19188708..19188885) FT /rpt_family="L1ME3" FT misc_feature 19189295..19189423 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 67.000" FT repeat_region complement(19189667..19189743) FT /rpt_family="AluY" FT repeat_region complement(19189745..19189825) FT /rpt_family="L1MB4" FT repeat_region complement(19189826..19189851) FT /rpt_family="AT_rich" FT repeat_region complement(19189868..19190164) FT /rpt_family="AluSx" FT repeat_region complement(19190165..19190539) FT /rpt_family="L1MB7" FT repeat_region complement(19190545..19190679) FT /rpt_family="FLAM_C" FT repeat_region complement(19190681..19190853) FT /rpt_family="L1MB7" FT repeat_region complement(19190960..19191037) FT /rpt_family="MIR" FT repeat_region 19191310..19191445 FT /rpt_family="AluJo" FT repeat_region 19191447..19191752 FT /rpt_family="AluJb" FT repeat_region 19191768..19191940 FT /rpt_family="AluJo" FT repeat_region 19191941..19192006 FT /rpt_family="(GAAA)n" FT misc_feature 19192253..19192327 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 62.000" FT repeat_region complement(19192923..19193131) FT /rpt_family="MLT1D" FT repeat_region complement(19193186..19193471) FT /rpt_family="AluSx" FT repeat_region complement(19193472..19193624) FT /rpt_family="AluJ" FT repeat_region complement(19193625..19193920) FT /rpt_family="AluSx" FT repeat_region complement(19193921..19194053) FT /rpt_family="AluJ" FT repeat_region complement(19194058..19194248) FT /rpt_family="MLT1D" FT repeat_region 19194424..19194951 FT /rpt_family="VNTR" FT /rpt_type=TANDEM FT /note="approximately 60bp repeat" FT repeat_region 19195621..19195756 FT /rpt_family="FLAM_A" FT repeat_region 19196041..19196108 FT /rpt_family="MIR" FT repeat_region complement(19196189..19196480) FT /rpt_family="AluSx" FT repeat_region 19196604..19196668 FT /rpt_family="(GGAA)n" FT repeat_region complement(19196946..19197242) FT /rpt_family="AluSx" FT repeat_region complement(19197249..19197348) FT /rpt_family="L1MC4" FT repeat_region complement(19197369..19197408) FT /rpt_family="AT_rich" FT repeat_region complement(19197448..19197665) FT /rpt_family="AluJb" FT repeat_region complement(19197666..19198094) FT /rpt_family="L1MA9" FT repeat_region complement(19198095..19198395) FT /rpt_family="AluSx" FT repeat_region complement(19198403..19198530) FT /rpt_family="L1MC4" FT misc_feature complement(19198822..19198937) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(19199013..19199314) FT /rpt_family="AluY" FT repeat_region complement(19199316..19199606) FT /rpt_family="AluSg" FT repeat_region complement(19199615..19199913) FT /rpt_family="AluSx" FT repeat_region 19200055..19200356 FT /rpt_family="AluSg" FT repeat_region complement(19200357..19200382) FT /rpt_family="AT_rich" FT repeat_region 19200396..19200696 FT /rpt_family="AluSx" FT repeat_region 19201123..19201354 FT /rpt_family="MER39" FT repeat_region 19201355..19201470 FT /rpt_family="FLAM_C" FT repeat_region 19201494..19201628 FT /rpt_family="MER39b_j" FT misc_feature complement(19201523..19201630) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 84.000" FT repeat_region 19201984..19202286 FT /rpt_family="AluSq" FT repeat_region 19202404..19202710 FT /rpt_family="AluJo" FT repeat_region complement(19202919..19203116) FT /rpt_family="MLT1C" FT misc_feature complement(19203005..19203107) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 78.000" FT repeat_region complement(19203832..19204123) FT /rpt_family="AluJb" FT repeat_region complement(19204131..19204487) FT /rpt_family="L1MC3" FT repeat_region complement(19204489..19204784) FT /rpt_family="AluSg" FT repeat_region complement(19204785..19205385) FT /rpt_family="L1MC3" FT repeat_region 19205571..19205716 FT /rpt_family="AluJo" FT repeat_region 19205723..19206032 FT /rpt_family="AluSx" FT repeat_region 19206049..19206126 FT /rpt_family="AluJo/FRAM" FT repeat_region 19206141..19206441 FT /rpt_family="AluSx" FT misc_feature 19206464..19206612 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 70.000" FT repeat_region 19206614..19206663 FT /rpt_family="MIR" FT misc_feature 19206900..19207018 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 69.000 DDS similarity to FT AA062554 zf68d07.r1 Soares pineal gland N3HPG Homo sapiens FT cDNA clone 382093 5' (103..220); 97% FT identity.~(33682..33794) DDS similarity to H13995 EST00021 FT Homo sapiens genomic clone C3-7 5'. Score: 204 Identity: FT 110/111 (99%)." FT CDS join(19206971..19207018,19212590..19212695, FT 19215722..19215747,19216370..19216536,19217078..19217194, FT 19218703..>19218885) FT /codon_start=1 FT /product="R29893_1" FT /note="Hypothetical protein most similar to Grave's disease FT carrier protein" FT /protein_id="AAC02758.1" FT /translation="MRMLRLSCPRPSHQRQRDHRQVLSSLLSGALAGALAKTAVAPLDR FT TKIIFQVSSKRFSAKEAFRVLYYTYLNEGFLSLWRGNSATMVRVVPYAAIQFSAHEEYK FT RILGSYYGFRGEALPPWPRLFAGALAGTTAASLTYPLDLVRARMAVTPKEMYSNIFHVF FT IRISREEGLKTLYHGFMPTVLGVIPYAGLSFFTYETLKSLHRGKESWEHEEGT" FT repeat_region 19207464..19207762 FT /rpt_family="AluSx" FT misc_feature 19207980..19208264 FT /note="DDS similarity to AA346339 EST52466 Greater omentum FT tumor Homo sapiens cDNA 5' end. Score: 547 Identity: FT 281/286 (98%).~(34820..35051) DDS similarity to HHEA15R H. FT sapiens partial cDNA sequence; clone HEA15R; single read. FT Score: 417 Identity: 226/243 (93%)." FT repeat_region 19208491..19208787 FT /rpt_family="AluSx" FT repeat_region 19209125..19209413 FT /rpt_family="AluJo" FT repeat_region 19209446..19209745 FT /rpt_family="AluSx" FT repeat_region complement(19210544..19210836) FT /rpt_family="AluSx" FT repeat_region 19210869..19211169 FT /rpt_family="AluSx" FT misc_feature 19212590..19212695 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 91.000~DDS similarity FT to AA062554 zf68d07.r1 Soares pineal gland N3HPG Homo FT sapiens cDNA clone 382093 5' (221..325); 99% FT identity.~(39630..39475) AA631622 np59c12.s1 NCI_CGAP_Br2 FT Homo sapiens cDNA clone IMAGE:1130614 similar to FT SW:BT1_MAIZE P29518 BRITTLE-1 PROTEIN PRECURSOR. FT (330..214); 96% identity.~(39370..39475) H13997 EST00023 FT Homo sapiens genomic clone C3-30 5'. Score: 183 Identity: FT 100/105 (95%).~(39424..39475) AA632137 np74e10.s1 FT NCI_CGAP_Br2 Homo sapiens cDNA clone IMAGE:1132074 similar FT to SW:GDC_BOVIN Q01888 GRAVE'S DISEASE CARRIER PROTEIN FT (529..478); 100% identity." FT repeat_region complement(19212816..19213117) FT /rpt_family="AluY" FT repeat_region complement(19213118..19213230) FT /rpt_family="FLAM_A" FT repeat_region 19213273..19213570 FT /rpt_family="AluSx" FT repeat_region 19213571..19213596 FT /rpt_family="AT_rich" FT repeat_region complement(19213609..19213888) FT /rpt_family="MLT1C" FT repeat_region complement(19213901..19214203) FT /rpt_family="AluSx" FT repeat_region complement(19214206..19214383) FT /rpt_family="MLT1C" FT repeat_region 19214565..19214670 FT /rpt_family="MIR" FT repeat_region complement(19214714..19215021) FT /rpt_family="AluSx" FT misc_feature 19215722..19215747 FT /note="DDS similarity to AA062554 zf68d07.r1 Soares pineal FT gland N3HPG Homo sapiens cDNA clone 382093 5' (326..351); FT 96% identity.~AA632137 np74e10.s1 NCI_CGAP_Br2 Homo sapiens FT cDNA clone IMAGE:1132074 similar to SW:GDC_BOVIN Q01888 FT GRAVE'S DISEASE CARRIER PROTEIN ;(477..452); 100% identity" FT misc_feature 19216370..19216536 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~DDS similarity FT to AA062554 zf68d07.r1 Soares pineal gland N3HPG Homo FT sapiens cDNA clone 382093 5' (352..405); 87% identity.~DDS FT similarity to AA632137 np74e10.s1 NCI_CGAP_Br2 Homo sapiens FT cDNA clone IMAGE:1132074 similar to SW:GDC_BOVIN Q01888 FT GRAVE'S DISEASE CARRIER PROTEIN ; (451..285); 99% FT identity.~(43177..43316) AA063161 zf68d07.s1 Soares pineal FT gland N3HPG Homo sapiens cDNA clone 382093 3' similar to FT SW:GDC_BOVIN Q01888 GRAVE'S DISEASE CARRIER PROTEIN FT (430..287); 97% identity.~(43150..43270) BLASTX similarity FT to PID (53..100); match: 0.54, score: 9.3e-17; database FT searched: nr; (Z79755) F43G9.3 [Caenorhabditis elegans]" FT misc_feature 19217078..19217194 FT /note="DDS similarity to AA631622 np59c12.s1 NCI_CGAP_Br2 FT Homo sapiens cDNA clone IMAGE:1130614 similar to FT SW:BT1_MAIZE P29518 BRITTLE-1 PROTEIN PRECURSOR. (213..95); FT 100% identity.~DDS similarity to AA632137 np74e10.s1 FT NCI_CGAP_Br2 Homo sapiens cDNA clone IMAGE:1132074 similar FT to SW:GDC_BOVIN Q01888 GRAVE'S DISEASE CARRIER PROTEIN FT ;(284..168); 100% identity.~DDS similarity to AA063161 FT zf68d07.s1 Soares pineal gland N3HPG Homo sapiens cDNA FT clone 382093 3' similar to SW:GDC_BOVIN Q01888 GRAVE'S FT DISEASE CARRIER PROTEIN ;(286..168); 98% identity.~BLASTX FT similarity to PID (110..143); match: 0.5, score: 9.3e-17; FT database searched: nr; (Z79755) F43G9.3 [Caenorhabditis FT elegans]" FT repeat_region 19217460..19217763 FT /rpt_family="AluSx" FT repeat_region 19217847..19218144 FT /rpt_family="AluJo" FT repeat_region 19218160..19218455 FT /rpt_family="AluSx" FT misc_feature 19218703..19218885 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~DDS similarity FT to overlapping ESTs: (45483..45645) AA632137 np74e10.s1 FT NCI_CGAP_Br2 Homo sapiens cDNA clone IMAGE:1132074 similar FT to SW:GDC_BOVIN Q01888 GRAVE'S DISEASE CARRIER PROTEIN FT ;(167..1); 95% identity.~(45483..45578) AA631622 np59c12.s1 FT NCI_CGAP_Br2 Homo sapiens cDNA clone IMAGE:1130614 similar FT to SW:BT1_MAIZE P29518 BRITTLE-1 PROTEIN PRECURSOR. FT (96..1); 99% identity.~(45483..45652) AA063161 zf68d07.s1 FT Soares pineal gland N3HPG Homo sapiens cDNA clone 382093 3' FT similar to SW:GDC_BOVIN Q01888 GRAVE'S DISEASE CARRIER FT PROTEIN ;(167..15); 99% identity.~BLASTX similarity to PID FT (145..195); match: 0.58, score: 1.3e-14; database searched: FT nr; (Z79755) F43G9.3 [Caenorhabditis elegans]" FT repeat_region 19219083..19219373 FT /rpt_family="AluJb" FT repeat_region complement(19219600..19219732) FT /rpt_family="FLAM_C" FT repeat_region complement(19220251..19220526) FT /rpt_family="ALU" FT repeat_region 19220874..19221163 FT /rpt_family="ALU" FT CDS <19221378..19221685 FT /codon_start=3 FT /product="R31240_1" FT /note="hypothetical partial orf most similar to orf from C. FT elegans cosmid F43G9.3 (Z79755); putative exon, Xgrail FT 1.3c, excellent" FT /protein_id="AAB86983.1" FT /translation="YSGRRQPYPFERMIFGACAGLIGQSASYPLDVVRRRMQTAGVTGY FT PRASIARTLRTIVREEGAVRGLYKGLSMNWVKGPIAVGISFTTFDLMQILLRHLQS" FT misc_feature 19222245..19222479 FT /note="BLASTN similarity to H67311 (1..236); match: 1, FT score: 4.1e-83; database searched: est; yu51b02.r1 Homo FT sapiens cDNA clone 229611 5'." FT misc_feature complement(19222477..19222799) FT /note="BLASTN similarity to Z43933 (1..323); match: 0.98, FT score: 5.1e-132; database searched: est; H. sapiens partial FT cDNA sequence" FT misc_feature 19222478..19222808 FT /note="BLASTN similarity to R11790 (1..332); match: 0.99, FT score: 2.8e-130; database searched: est; yf50e02.r1 Homo FT sapiens cDNA clone 25319 5'." FT misc_feature 19222757..19222792 FT /note="BLASTN similarity to R10954 (3..38); match: 1, FT score: 1.5e-115; database searched: est; yf38f01.r1 Homo FT sapiens cDNA clone 129145 5'." FT misc_feature complement(19222779..19222825) FT /note="BLASTN similarity to Z43933 (304..350); match: 0.82, FT score: 5.1e-132; database searched: est; H. sapiens partial FT cDNA sequence" FT misc_feature 19222780..19222981 FT /note="BLASTN similarity to R10954 (25..226); match: 0.98, FT score: 1.5e-115; database searched: est; yf38f01.r1 Homo FT sapiens cDNA clone 129145 5'." FT misc_feature 19222808..19222838 FT /note="BLASTN similarity to R11790 (333..363); match: 0.93, FT score: 2.8e-130; database searched: est; yf50e02.r1 Homo FT sapiens cDNA clone 25319 5'." FT misc_feature 19222818..19222865 FT /note="BLASTN similarity to R11790 (344..391); match: 0.7, FT score: 2.3e-128; database searched: est; yf50e02.r1 Homo FT sapiens cDNA clone 25319 5'." FT misc_feature 19222903..19223165 FT /note="BLASTN similarity to R22558 (1..263); match: 0.99, FT score: 2.2e-120; database searched: est; yh23h12.r1 Homo FT sapiens cDNA clone 130631 5'." FT misc_feature 19222904..19223177 FT /note="BLASTN similarity to H03191 (1..274); match: 0.99, FT score: 3.8e-105; database searched: est; yj47b08.r1 Homo FT sapiens cDNA clone 151863 5'." FT misc_feature 19222987..19223074 FT /note="BLASTN similarity to R10954 (234..321); match: 1, FT score: 1.5e-115; database searched: est; yf38f01.r1 Homo FT sapiens cDNA clone 129145 5'." FT misc_feature complement(19222997..19223049) FT /note="BLASTN similarity to Z16004 (1..53); match: 0.94, FT score: 1.3e-114; database searched: est; H. sapiens partial FT cDNA sequence, clone 56B12" FT misc_feature 19223040..19223350 FT /note="BLASTN similarity to R48116 (2..312); match: 0.98, FT score: 2.0e-134; database searched: est; yj63g05.r1 Homo FT sapiens cDNA clone 153464 5'." FT misc_feature complement(19223043..19223253) FT /note="BLASTN similarity to Z16004 (48..258); match: 0.95, FT score: 1.3e-114; database searched: est; H. sapiens partial FT cDNA sequence, clone 56B12" FT misc_feature 19223162..19223179 FT /note="BLASTN similarity to R22558 (261..278); match: 1, FT score: 2.2e-120; database searched: est; yh23h12.r1 Homo FT sapiens cDNA clone 130631 5'." FT misc_feature complement(19223239..19223323) FT /note="BLASTN similarity to Z16004 (245..329); match: 0.92, FT score: 1.3e-114; database searched: est; H. sapiens partial FT cDNA sequence, clone 56B12" FT misc_feature 19223276..19223307 FT /note="BLASTN similarity to R22558 (385..416); match: 1, FT score: 2.2e-120; database searched: est; yh23h12.r1 Homo FT sapiens cDNA clone 130631 5'." FT misc_feature complement(19223280..19223319) FT /note="BLASTN similarity to H03990 (387..426); match: 0.9, FT score: 3.4e-142; database searched: est; yj47b08.s1 Homo FT sapiens cDNA clone 151863 3'." FT misc_feature complement(19223317..19223358) FT /note="BLASTN similarity to H03990 (347..388); match: 0.95, FT score: 3.4e-142; database searched: est; yj47b08.s1 Homo FT sapiens cDNA clone 151863 3'." FT misc_feature complement(19223329..19223358) FT /note="BLASTN similarity to R10902 (336..365); match: 0.76, FT score: 2.1e-117; database searched: est; yf38f01.s1 Homo FT sapiens cDNA clone 129145 3'." FT misc_feature complement(19223340..19223358) FT /note="BLASTN similarity to R22559 (356..374); match: 0.94, FT score: 1.1e-108; database searched: est; yh23h12.s1 Homo FT sapiens cDNA clone 130631 3'. >gb|G30262|G30262 human STS FT SHGC-36640" FT misc_feature complement(19223344..19223392) FT /note="BLASTN similarity to R10902 (301..349); match: 0.85, FT score: 2.8e-125; database searched: est; yf38f01.s1 Homo FT sapiens cDNA clone 129145 3'." FT misc_feature complement(19223355..19223392) FT /note="BLASTN similarity to H03990 (312..349); match: 0.73, FT score: 3.1e-97; database searched: est; yj47b08.s1 Homo FT sapiens cDNA clone 151863 3'." FT misc_feature complement(19223371..19223506) FT /note="BLASTN similarity to H03990 (197..332); match: 0.97, FT score: 3.4e-142; database searched: est; yj47b08.s1 Homo FT sapiens cDNA clone 151863 3'." FT misc_feature complement(19223371..19223395) FT /note="BLASTN similarity to R48002 (306..330); match: 0.92, FT score: 1.1e-95; database searched: est; yj63g05.s1 Homo FT sapiens cDNA clone 153464 3'." FT misc_feature complement(19223372..19223695) FT /note="BLASTN similarity to Z39994 (1..324); match: 0.99, FT score: 6.2e-126; database searched: est; H. sapiens partial FT cDNA sequence" FT misc_feature complement(19223384..19223506) FT /note="BLASTN similarity to R10902 (186..308); match: 0.97, FT score: 2.8e-125; database searched: est; yf38f01.s1 Homo FT sapiens cDNA clone 129145 3'." FT misc_feature complement(19223384..19223436) FT /note="BLASTN similarity to R22559 (272..324); match: 0.83, FT score: 1.1e-108; database searched: est; yh23h12.s1 Homo FT sapiens cDNA clone 130631 3'. >gb|G30262|G30262 human STS FT SHGC-36640" FT misc_feature 19223384..19223413 FT /note="BLASTN similarity to R48116 (353..382); match: 0.8, FT score: 2.0e-134; database searched: est; yj63g05.r1 Homo FT sapiens cDNA clone 153464 5'." FT misc_feature complement(19223396..19223436) FT /note="BLASTN similarity to R48002 (262..302); match: 0.97, FT score: 1.1e-95; database searched: est; yj63g05.s1 Homo FT sapiens cDNA clone 153464 3'." FT misc_feature 19223406..19223471 FT /note="BLASTN similarity to R48116 (379..444); match: 0.74, FT score: 2.0e-134; database searched: est; yj63g05.r1 Homo FT sapiens cDNA clone 153464 5'." FT misc_feature complement(19223410..19223506) FT /note="BLASTN similarity to H68521 (192..288); match: 0.97, FT score: 2.9e-106; database searched: est; yu51b02.s1 Homo FT sapiens cDNA clone 229611 3'." FT misc_feature complement(19223413..19223465) FT /note="BLASTN similarity to R22559 (242..294); match: 0.66, FT score: 5.6e-102; database searched: est; yh23h12.s1 Homo FT sapiens cDNA clone 130631 3'. >gb|G30262|G30262 human STS FT SHGC-36640" FT misc_feature complement(19223445..19223698) FT /note="BLASTN similarity to Z16003 (1..254); match: 0.95, FT score: 3.5e-89; database searched: est; H. sapiens partial FT cDNA sequence, clone 56B12" FT misc_feature complement(19223449..19223703) FT /note="BLASTN similarity to R22559 (2..256); match: 0.98, FT score: 1.1e-108; database searched: est; yh23h12.s1 Homo FT sapiens cDNA clone 130631 3'. >gb|G30262|G30262 human STS FT SHGC-36640" FT misc_feature complement(19223449..19223694) FT /note="BLASTN similarity to R48002 (1..246); match: 0.91, FT score: 1.1e-95; database searched: est; yj63g05.s1 Homo FT sapiens cDNA clone 153464 3'." FT misc_feature complement(19223503..19223703) FT /note="BLASTN similarity to H03990 (1..201); match: 0.97, FT score: 3.4e-142; database searched: est; yj47b08.s1 Homo FT sapiens cDNA clone 151863 3'." FT misc_feature complement(19223503..19223697) FT /note="BLASTN similarity to H68521 (2..196); match: 0.99, FT score: 2.9e-106; database searched: est; yu51b02.s1 Homo FT sapiens cDNA clone 229611 3'." FT misc_feature complement(19223503..19223692) FT /note="BLASTN similarity to R10902 (1..190); match: 0.99, FT score: 2.8e-125; database searched: est; yf38f01.s1 Homo FT sapiens cDNA clone 129145 3'." FT misc_feature complement(19223540..19223688) FT /note="BLASTN similarity to F00735 (2..150); match: 1, FT score: 1.7e-53; database searched: est; H. sapiens partial FT cDNA sequence, clone 40E07" FT misc_feature complement(19223541..19223589) FT /note="BLASTN similarity to R37709 (117..165); match: 0.71, FT score: 1.0e-42; database searched: est; yf50e02.s1 Homo FT sapiens cDNA clone 25319 3'." FT misc_feature complement(19223586..19223695) FT /note="BLASTN similarity to R37709 (10..119); match: 1, FT score: 1.0e-42; database searched: est; yf50e02.s1 Homo FT sapiens cDNA clone 25319 3'." FT repeat_region 19224492..19224871 FT /rpt_family="ALU" FT misc_feature 19224944..19225032 FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= good" FT repeat_region complement(19225444..19225736) FT /rpt_family="ALU" FT repeat_region complement(19225769..19226057) FT /rpt_family="ALU" FT repeat_region complement(19226470..19226774) FT /rpt_family="ALU" FT repeat_region 19227234..19227501 FT /rpt_family="ALU" FT repeat_region 19227536..19227614 FT /rpt_family="Alu" FT repeat_region complement(19227630..19227911) FT /rpt_family="ALU" FT repeat_region complement(19228143..19228228) FT /rpt_family="MER20" FT repeat_region 19228324..19228766 FT /rpt_family="ALU" FT repeat_region complement(19228873..19229145) FT /rpt_family="ALU" FT repeat_region complement(19229265..19229546) FT /rpt_family="ALU" FT repeat_region complement(19229963..19230248) FT /rpt_family="ALU" FT misc_feature complement(19230422..19230647) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= good" FT misc_feature 19230424..19230728 FT /note="BLASTN similarity to R56908 (21..325); match: 0.91, FT score: 9.9e-106; database searched: est; yg95g07.s1 Homo FT sapiens cDNA clone 41325 3'. >gb|G24476|G24476 human STS FT WI-14120." FT misc_feature complement(19230516..19230558) FT /note="BLASTN similarity to AA249521 (157..199); match: FT 0.83, score: 2.6e-43; database searched: month.na; FT jj4246.seq.F Human fetal heart, Lambda ZAP Express Homo FT sapiens cDNA 5'" FT misc_feature 19230696..19230730 FT /note="BLASTN similarity to R56908 (294..328); match: 0.82, FT score: 9.9e-106; database searched: est; yg95g07.s1 Homo FT sapiens cDNA clone 41325 3'. >gb|G24476|G24476 human STS FT WI-14120." FT misc_feature complement(19230739..19230935) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= good" FT misc_feature complement(19230750..19230965) FT /note="BLASTN similarity to R74881 (184..399); match: 0.74, FT score: 5.0e-82; database searched: est; MDB0204 Mouse FT brain, Stratagene Mus musculus cDNA 3'end." FT misc_feature complement(19230755..19230796) FT /note="BLASTN similarity to AA249521 (136..177); match: FT 0.95, score: 1.3e-46; database searched: month.na; FT jj4246.seq.F Human fetal heart, Lambda ZAP Express Homo FT sapiens cDNA 5'" FT misc_feature complement(19230794..19230874) FT /note="BLASTN similarity to AA249521 (59..139); match: FT 0.96, score: 1.3e-46; database searched: month.na; FT jj4246.seq.F Human fetal heart, Lambda ZAP Express Homo FT sapiens cDNA 5'" FT misc_feature complement(19230901..19230936) FT /note="BLASTN similarity to AA249521 (1..36); match: 1, FT score: 1.3e-46; database searched: month.na; jj4246.seq.F FT Human fetal heart, Lambda ZAP Express Homo sapiens cDNA 5'" FT misc_feature complement(19231491..19231670) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT misc_feature complement(19231571..19231673) FT /note="BLASTN similarity to R74881 (54..156); match: 0.86, FT score: 5.0e-82; database searched: est; MDB0204 Mouse FT brain, Stratagene Mus musculus cDNA 3'end." FT misc_feature complement(19231799..19231856) FT /note="BLASTN similarity to R74881 (1..58); match: 0.86, FT score: 5.0e-82; database searched: est; MDB0204 Mouse FT brain, Stratagene Mus musculus cDNA 3'end." FT misc_feature complement(19231801..19231975) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT misc_feature complement(19232117..19232230) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT misc_feature complement(19232317..19232477) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT misc_feature complement(19232505..19232558) FT /note="BLASTN similarity to R15300 (349..402); match: 0.7, FT score: 9.1e-94; database searched: est; yf89c12.r1 Homo FT sapiens cDNA clone 29770 5' similar to contains Alu FT repetitive element" FT misc_feature complement(19232508..19232558) FT /note="BLASTN similarity to R15300 (348..398); match: 0.82, FT score: 9.4e-98; database searched: est; yf89c12.r1 Homo FT sapiens cDNA clone 29770 5' similar to contains Alu FT repetitive element" FT misc_feature complement(19232544..19232577) FT /note="BLASTN similarity to R15300 (328..361); match: 0.79, FT score: 3.4e-92; database searched: est; yf89c12.r1 Homo FT sapiens cDNA clone 29770 5' similar to contains Alu FT repetitive element" FT misc_feature complement(19232576..19232807) FT /note="BLASTN similarity to R15300 (97..328); match: 0.99, FT score: 9.4e-98; database searched: est; yf89c12.r1 Homo FT sapiens cDNA clone 29770 5' similar to contains Alu FT repetitive element" FT repeat_region 19232836..19233111 FT /rpt_family="ALU" FT repeat_region 19233337..19233592 FT /rpt_family="ALU" FT repeat_region 19234594..19234876 FT /rpt_family="ALU" FT repeat_region 19235494..19235790 FT /rpt_family="ALU" FT repeat_region complement(19236190..19236614) FT /rpt_family="ALU" FT repeat_region 19236661..19236988 FT /rpt_family="ALU" FT repeat_region 19237274..19237868 FT /rpt_family="ALU" FT repeat_region 19237891..19238127 FT /rpt_family="L1" FT repeat_region complement(19238129..19238421) FT /rpt_family="ALU" FT repeat_region 19238468..19238765 FT /rpt_family="ALU" FT repeat_region 19238776..19239026 FT /rpt_family="L1" FT repeat_region complement(19239041..19239328) FT /rpt_family="ALU" FT repeat_region complement(19239347..19239636) FT /rpt_family="ALU" FT repeat_region 19239652..19239736 FT /rpt_family="L1" FT misc_feature complement(19240146..19240197) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= good" FT repeat_region 19240282..19240733 FT /rpt_family="ALU" FT misc_feature complement(19240965..19241123) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT repeat_region 19241475..19241734 FT /rpt_family="ALU" FT repeat_region 19241757..19242040 FT /rpt_family="ALU" FT repeat_region complement(19242375..19242759) FT /rpt_family="ALU" FT misc_feature complement(19243126..19243317) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT misc_feature complement(19243300..19243324) FT /note="BLASTN similarity to R56756 (310..334); match: 0.88, FT score: 8.2e-70; database searched: est; yg95g07.r1 Homo FT sapiens cDNA clone 41325 5'." FT misc_feature complement(19243455..19243563) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT misc_feature complement(19243475..19243564) FT /note="BLASTN similarity to R56756 (216..305); match: 0.98, FT score: 8.2e-70; database searched: est; yg95g07.r1 Homo FT sapiens cDNA clone 41325 5'." FT misc_feature complement(19243934..19244022) FT /note="BLASTN similarity to R56756 (133..221); match: 0.98, FT score: 8.2e-70; database searched: est; yg95g07.r1 Homo FT sapiens cDNA clone 41325 5'." FT misc_feature complement(19243939..19244019) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT repeat_region complement(19244289..19244797) FT /rpt_family="ALU" FT repeat_region 19245144..19245382 FT /rpt_family="ALU" FT misc_feature complement(19245591..19245697) FT /note="BLASTN similarity to R56756 (31..137); match: 0.99, FT score: 2.3e-34; database searched: est; yg95g07.r1 Homo FT sapiens cDNA clone 41325 5'." FT misc_feature complement(19245593..19245696) FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT repeat_region complement(19246378..19246749) FT /rpt_family="ALU" FT repeat_region 19247191..19247473 FT /rpt_family="ALU" FT repeat_region complement(19250266..19250552) FT /rpt_family="ALU" FT repeat_region 19251235..19251505 FT /rpt_family="ALU" FT repeat_region 19251519..19251923 FT /rpt_family="ALU" FT repeat_region 19251964..19252080 FT /rpt_family="ALU" FT repeat_region 19252094..19252381 FT /rpt_family="ALU" FT repeat_region 19252416..19252701 FT /rpt_family="ALU" FT repeat_region complement(19253481..19254067) FT /rpt_family="ALU" FT repeat_region complement(19254474..19254893) FT /rpt_family="ALU" FT repeat_region complement(19254942..19255226) FT /rpt_family="ALU" FT repeat_region 19255313..19255396 FT /rpt_family="ALU" FT repeat_region 19255656..19255929 FT /rpt_family="ALU" FT 3'UTR complement(19256376..19256502) FT CDS complement(join(19256503..19256831,19257364..19257457, FT 19257551..19257684,19257845..19257992,19258507..19258641, FT 19260035..19260238,19261491..19261544)) FT /codon_start=1 FT /product="XMEF2" FT /note="myocyte-specific enhancer factor" FT /protein_id="AAB86982.1" FT /translation="MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIAL FT IIFNSANRLFQYASTDMDRVLLKYTEYSEPHESRTNTDILETLKRRGIGLDGPELEPDE FT GPEEPGEKFRRLAGEGGDPALPRPRLYPAAPAMPSPDVVYGALPPPGCDPSGLGEALPA FT QSRPSPFRPAAPKAGPPGLVHPLFSPSHLTSKTPPPLYLPTEGRRSDLPGGLAGPRGGL FT NTSRSLYSGLQNPCSTATPGPPLGSFPFLPGGPPVGAEAWARRVPQPAAPPRRPPQSAS FT SLSASLRPPGAPATFLRPSPIPCSSPGPWQSLCGLGPPCAGCPWPTAGPGRRSPGGTSP FT ERSPGTARARGDPTSLQASSEKTQQ" FT misc_feature 19256511..19256735 FT /note="BLASTN similarity to H38850 (1..225); match: 0.82, FT score: 2.2e-55; database searched: est; yp48f04.s1 Homo FT sapiens cDNA clone 190687 3' similar to SP:A39481 A39481, FT SERUM RESPONSE FACTOR-RELATED PROTEIN 2 -" FT repeat_region 19258991..19259288 FT /rpt_family="ALU" FT repeat_region complement(19259533..19259811) FT /rpt_family="ALU" FT misc_feature complement(19260079..19260238) FT /note="BLASTN similarity to H13976 (1..160); match: 0.99, FT score: 2.6e-58; database searched: est; EST00002 Homo FT sapiens genomic clone C5-1 5' similar to human FT myocyte-specific enhancer factor 2." FT repeat_region 19260615..19260910 FT /rpt_family="ALU" FT repeat_region 19261062..19261350 FT /rpt_family="ALU" FT 5'UTR complement(join(19261545..19261573,19293382..19293492, FT 19297702..19297814)) FT /standard_name="MEF2B" FT repeat_region 19261789..19262034 FT /rpt_family="ALU" FT repeat_region 19262659..19262750 FT /rpt_family="ALU" FT repeat_region complement(19262769..19263043) FT /rpt_family="ALU" FT repeat_region 19263080..19263207 FT /rpt_family="ALU" FT repeat_region 19263253..19263515 FT /rpt_family="ALU" FT repeat_region complement(19264280..19264850) FT /rpt_family="ALU" FT repeat_region complement(19264986..19265266) FT /rpt_family="ALU" FT repeat_region complement(19265276..19265541) FT /rpt_family="ALU" FT repeat_region complement(19267466..19267691) FT /rpt_family="ALU" FT repeat_region 19267709..19267809 FT /rpt_family="ALU" FT repeat_region 19267941..19268182 FT /rpt_family="L1" FT repeat_region 19268395..19268671 FT /rpt_family="ALU" FT repeat_region complement(19268902..19269181) FT /rpt_family="ALU" FT repeat_region 19269220..19269271 FT /rpt_family="ALU" FT repeat_region 19269294..19269719 FT /rpt_family="ALU" FT repeat_region complement(19269749..19270038) FT /rpt_family="ALU" FT repeat_region 19270065..19270242 FT /rpt_family="ALU" FT repeat_region complement(19270778..19271068) FT /rpt_family="ALU" FT repeat_region complement(19272616..19272896) FT /rpt_family="ALU" FT repeat_region complement(19272937..19273233) FT /rpt_family="ALU" FT repeat_region complement(19274009..19274258) FT /rpt_family="ALU" FT repeat_region complement(19274467..19274767) FT /rpt_family="ALU" FT repeat_region complement(19274815..19275063) FT /rpt_family="ALU" FT repeat_region 19275349..19275547 FT /rpt_family="ALU" FT repeat_region 19276126..19276238 FT /rpt_family="ALU" FT repeat_region 19277303..19277465 FT /rpt_family="ALU" FT repeat_region 19277601..19277679 FT /rpt_family="ALU" FT repeat_region 19277739..19278335 FT /rpt_family="ALU" FT repeat_region complement(19279082..19279376) FT /rpt_family="ALU" FT repeat_region complement(19279434..19279559) FT /rpt_family="ALU" FT repeat_region 19279598..19280170 FT /rpt_family="ALU" FT repeat_region complement(19280220..19280311) FT /rpt_family="ALU" FT repeat_region complement(19282191..19282439) FT /rpt_family="ALU" FT repeat_region 19283729..19284025 FT /rpt_family="ALU" FT repeat_region 19284050..19284194 FT /rpt_family="ALU" FT repeat_region complement(19284475..19284669) FT /rpt_family="ALU" FT repeat_region complement(19285196..19285474) FT /rpt_family="ALU" FT repeat_region complement(19285496..19285760) FT /rpt_family="ALU" FT repeat_region complement(19286199..19286610) FT /rpt_family="ALU" FT repeat_region 19286652..19286914 FT /rpt_family="ALU" FT misc_feature 19287095..19287185 FT /note="BLASTN similarity to H14001 (1..91); match: 1, FT score: 1.2e-32; database searched: est; EST00027 Homo FT sapiens genomic clone C4-35 5'." FT misc_feature 19287181..19287200 FT /note="BLASTN similarity to H14001 (89..108); match: 0.9, FT score: 1.2e-32; database searched: est; EST00027 Homo FT sapiens genomic clone C4-35 5'." FT misc_feature 19287715..19287855 FT /note="BLASTN similarity to T96125 (2..142); match: 0.99, FT score: 3.9e-129; database searched: est; ye48c05.s1 Homo FT sapiens cDNA clone 120968 3'." FT misc_feature 19287726..19288044 FT /note="BLASTN similarity to H44376 (8..326); match: 0.95, FT score: 1.3e-115; database searched: est; yp18f10.s1 Homo FT sapiens cDNA clone 187819 3'." FT misc_feature 19287747..19287849 FT /note="BLASTN similarity to R66715 (1..103); match: 0.83, FT score: 1.5e-105; database searched: est; yi33f08.s1 Homo FT sapiens cDNA clone 141063 3'." FT misc_feature 19287747..19287841 FT /note="BLASTN similarity to R67595 (2..96); match: 0.85, FT score: 4.9e-116; database searched: est; yi34f08.s1 Homo FT sapiens cDNA clone 141159 3'." FT misc_feature 19287817..19288036 FT /note="BLASTN similarity to R66715 (72..291); match: 0.97, FT score: 1.5e-105; database searched: est; yi33f08.s1 Homo FT sapiens cDNA clone 141063 3'." FT misc_feature 19287817..19288010 FT /note="BLASTN similarity to R67595 (73..266); match: 0.97, FT score: 4.9e-116; database searched: est; yi34f08.s1 Homo FT sapiens cDNA clone 141159 3'." FT misc_feature 19287818..19288057 FT /note="BLASTN similarity to T96125 (104..343); match: 0.9, FT score: 3.9e-129; database searched: est; ye48c05.s1 Homo FT sapiens cDNA clone 120968 3'." FT misc_feature 19288004..19288050 FT /note="BLASTN similarity to R67595 (261..307); match: 0.65, FT score: 4.9e-116; database searched: est; yi34f08.s1 Homo FT sapiens cDNA clone 141159 3'." FT misc_feature 19288033..19288075 FT /note="BLASTN similarity to R67595 (293..335); match: 0.88, FT score: 1.6e-113; database searched: est; yi34f08.s1 Homo FT sapiens cDNA clone 141159 3'." FT misc_feature 19288065..19288096 FT /note="BLASTN similarity to R67595 (326..357); match: 0.93, FT score: 4.9e-116; database searched: est; yi34f08.s1 Homo FT sapiens cDNA clone 141159 3'." FT misc_feature 19288106..19288134 FT /note="BLASTN similarity to R67595 (369..397); match: 0.93, FT score: 4.9e-116; database searched: est; yi34f08.s1 Homo FT sapiens cDNA clone 141159 3'." FT repeat_region 19288165..19288414 FT /rpt_family="ALU" FT repeat_region complement(19288685..19288836) FT /rpt_family="ALU" FT repeat_region 19289487..19289782 FT /rpt_family="ALU" FT repeat_region 19291731..19292017 FT /rpt_family="ALU" FT repeat_region 19292048..19292116 FT /rpt_family="ALU" FT misc_feature 19292685..19292741 FT /note="BLASTN similarity to R41645 (10..66); match: 0.78, FT score: 3.5e-65; database searched: est; yf86h09.s1 Homo FT sapiens cDNA clone 29487 3'." FT misc_feature complement(19292686..19292958) FT /note="BLASTN similarity to Z41032 (1..273); match: 0.98, FT score: 1.4e-103; database searched: est; H. sapiens partial FT cDNA sequence" FT misc_feature complement(19292686..19292888) FT /note="BLASTN similarity to F01638 (1..203); match: 0.98, FT score: 2.9e-74; database searched: est; H. sapiens partial FT cDNA sequence" FT misc_feature complement(19292693..19292938) FT /note="BLASTN similarity to F01637 (1..246); match: 0.97, FT score: 8.9e-91; database searched: est; H. sapiens partial FT cDNA sequence" FT misc_feature 19292715..19293060 FT /note="BLASTN similarity to R41645 (41..394); match: 1, FT score: 1.4e-107; database searched: est; yf86h09.s1 Homo FT sapiens cDNA clone 29487 3'." FT misc_feature complement(19293357..19293396) FT /note="BLASTN similarity to R15197 (302..341); match: 0.82, FT score: 1.4e-30; database searched: est; yf86h09.r1 Homo FT sapiens cDNA clone 29487 5'." FT misc_feature complement(19293386..19293490) FT /note="BLASTN similarity to T96207 (203..307); match: 0.98, FT score: 2.1e-32; database searched: est; ye48c05.r1 Homo FT sapiens cDNA clone 120968 5'." FT misc_feature complement(19293403..19293497) FT /note="BLASTN similarity to F07960 (202..296); match: 0.97, FT score: 1.9e-28; database searched: est; H. sapiens partial FT cDNA sequence" FT misc_feature complement(19293406..19293490) FT /note="BLASTN similarity to R15197 (206..290); match: 1, FT score: 1.4e-30; database searched: est; yf86h09.r1 Homo FT sapiens cDNA clone 29487 5'." FT misc_feature complement(19293409..19293497) FT /note="BLASTN similarity to F05384 (201..289); match: 0.97, FT score: 7.2e-26; database searched: est; H. sapiens partial FT cDNA sequence" FT repeat_region 19293828..19294234 FT /rpt_family="ALU" FT repeat_region complement(19294398..19294974) FT /rpt_family="ALU" FT repeat_region complement(19295115..19295408) FT /rpt_family="ALU" FT repeat_region complement(19295413..19295690) FT /rpt_family="ALU" FT repeat_region 19296223..19296510 FT /rpt_family="ALU" FT repeat_region 19297198..19297554 FT /rpt_family="THE1" FT misc_feature complement(19297664..19297816) FT /note="BLASTN similarity to R82529 (109..261); match: 0.75, FT score: 9.4e-27; database searched: est; yj19a06.r1 Homo FT sapiens cDNA clone 149170 5'." FT /note="BLASTN similarity to T81538 (23..175); match: 0.76, FT score: 1.0e-27; database searched: est; yd28a05.r1 Homo FT sapiens cDNA clone 109520 5'." FT /note="BLASTN similarity to R66253 (59..211); match: 0.75, FT score: 1.1e-26; database searched: est; yi34f08.r1 Homo FT sapiens cDNA clone 141159 5'." FT misc_feature complement(19297701..19297816) FT /note="BLASTN similarity to F05384 (26..141); match: 0.98, FT score: 7.3e-40; database searched: est; H. sapiens partial FT cDNA sequence" FT /note="BLASTN similarity to F05385 (26..141); match: 0.99, FT score: 1.7e-40; database searched: est; H. sapiens partial FT cDNA sequence" FT /note="BLASTN similarity to T29821 (1..116); match: 1, FT score: 3.2e-41; database searched: est; EST96632 Homo FT sapiens cDNA 5' end similar to serum response FT factor-related protein RSRFR2 (HT:1569)." FT /note="BLASTN similarity to F07960 (27..142); match: 1, FT score: 2.1e-41; database searched: est; H. sapiens partial FT cDNA sequence" FT misc_feature complement(19297701..19297769) FT /note="BLASTN similarity to T96207 (69..137); match: 1, FT score: 3.4e-34; database searched: est; ye48c05.r1 Homo FT sapiens cDNA clone 120968 5'." FT misc_feature complement(19297770..19297816) FT /note="BLASTN similarity to T96207 (23..69); match: 1, FT score: 3.4e-34; database searched: est; ye48c05.r1 Homo FT sapiens cDNA clone 120968 5'." FT repeat_region 19298012..19298298 FT /rpt_family="ALU" FT repeat_region complement(19298353..19298640) FT /rpt_family="ALU" FT repeat_region complement(19298659..19298779) FT /rpt_family="ALU" FT repeat_region complement(19298853..19299255) FT /rpt_family="ALU" FT repeat_region complement(19299644..19299941) FT /rpt_family="ALU" FT repeat_region 19300461..19300738 FT /rpt_family="ALU" FT repeat_region 19301324..19301610 FT /rpt_family="ALU" FT repeat_region 19301668..19301872 FT /rpt_family="MER2" FT repeat_region 19301901..19302318 FT /rpt_family="ALU" FT repeat_region complement(19302391..19302664) FT /rpt_family="ALU" FT misc_feature 19302879..19302973 FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT misc_feature complement(19302890..19302985) FT /note="BLASTN similarity to R82529 (15..110); match: 1, FT score: 4.9e-30; database searched: est; yj19a06.r1 Homo FT sapiens cDNA clone 149170 5'." FT misc_feature complement(19302945..19303367) FT /note="BLASTN similarity to H44375 (1..423); match: 0.91, FT score: 3.6e-143; database searched: est; yp18f10.r1 Homo FT sapiens cDNA clone 187819 5'." FT misc_feature complement(19303147..19303367) FT /note="BLASTN similarity to H26825 (1..221); match: 0.96, FT score: 4.3e-78; database searched: est; yl63f07.r1 Homo FT sapiens cDNA clone 162949 5'." FT misc_binding 19303380..19303639 FT /bound_moiety="CpG island" FT /note=">95% identity to CpG island clones cpg194f12 and FT cpg59a1 (Z61792, Z61793) from Sanger CpG island database" FT misc_feature 19303681..19303911 FT /note="BLASTN similarity to H52764 (8..238); match: 0.95, FT score: 2.6e-80; database searched: est; yo22e01.r1 Homo FT sapiens cDNA clone 178680 5'." FT misc_feature 19303764..19303911 FT /note="BLASTN similarity to R70674 (14..161); match: 0.99, FT score: 4.6e-51; database searched: est; yi41b12.r1 Homo FT sapiens cDNA clone 141791 5'." FT misc_feature 19303768..19303911 FT /note="BLASTN similarity to R50219 (13..156); match: 0.99, FT score: 1.1e-49; database searched: est; yj61e07.r1 Homo FT sapiens cDNA clone 153252 5'." FT misc_feature 19303778..19303911 FT /note="BLASTN similarity to T35325 (1..134); match: 0.97, FT score: 1.2e-45; database searched: est; EST82872 Homo FT sapiens cDNA 5' end similar to None." FT misc_feature 19303781..19303911 FT /note="BLASTN similarity to R25737 (11..141); match: 0.98, FT score: 2.2e-43; database searched: est; yh43b01.r1 Homo FT sapiens cDNA clone 132457 5'." FT misc_feature 19303783..19303911 FT /note="BLASTN similarity to H71632 (1..129); match: 0.99, FT score: 3.8e-43; database searched: est; ys10b11.r1 Homo FT sapiens cDNA clone 214365 5'." FT repeat_region complement(19304110..19304184) FT /rpt_family="MIR" FT repeat_region complement(19304228..19304511) FT /rpt_family="ALU" FT misc_feature 19304746..19304953 FT /note="BLASTN similarity to R50219 (153..360); match: 0.96, FT score: 9.8e-77; database searched: est; yj61e07.r1 Homo FT sapiens cDNA clone 153252 5'." FT misc_feature 19304746..19304947 FT /note="BLASTN similarity to H52764 (235..436); match: 0.95, FT score: 5.5e-72; database searched: est; yo22e01.r1 Homo FT sapiens cDNA clone 178680 5'." FT misc_feature 19304746..19304942 FT /note="BLASTN similarity to H71632 (126..322); match: 1, FT score: 2.0e-77; database searched: est; ys10b11.r1 Homo FT sapiens cDNA clone 214365 5'." FT /note="BLASTN similarity to H63462 (77..273); match: 0.99, FT score: 1.4e-76; database searched: est; yr53e02.r1 Homo FT sapiens cDNA clone 209018 5'." FT misc_feature 19304746..19304932 FT /note="BLASTN similarity to R70674 (158..344); match: 0.99, FT score: 4.4e-73; database searched: est; yi41b12.r1 Homo FT sapiens cDNA clone 141791 5'." FT misc_feature 19304746..19304880 FT /note="BLASTN similarity to T35325 (131..265); match: 1, FT score: 2.7e-49; database searched: est; EST82872 Homo FT sapiens cDNA 5' end similar to None." FT misc_feature 19304746..19304858 FT /note="BLASTN similarity to R25737 (138..250); match: 0.99, FT score: 7.7e-51; database searched: est; yh43b01.r1 Homo FT sapiens cDNA clone 132457 5'." FT misc_feature 19304746..19304846 FT /note="BLASTN similarity to T12131 (53..153); match: 1, FT score: 1.0e-34; database searched: est; A663F Homo sapiens FT cDNA clone A663." FT misc_feature 19304748..19304926 FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT misc_feature 19304855..19304895 FT /note="BLASTN similarity to R25737 (248..288); match: 0.9, FT score: 7.7e-51; database searched: est; yh43b01.r1 Homo FT sapiens cDNA clone 132457 5'." FT misc_feature 19304882..19304918 FT /note="BLASTN similarity to R25737 (276..312); match: 0.91, FT score: 8.7e-50; database searched: est; yh43b01.r1 Homo FT sapiens cDNA clone 132457 5'." FT misc_feature 19304913..19304937 FT /note="BLASTN similarity to R25737 (308..332); match: 0.88, FT score: 7.7e-51; database searched: est; yh43b01.r1 Homo FT sapiens cDNA clone 132457 5'." FT misc_feature 19304928..19304946 FT /note="BLASTN similarity to R70674 (341..359); match: 0.94, FT score: 4.4e-73; database searched: est; yi41b12.r1 Homo FT sapiens cDNA clone 141791 5'." FT repeat_region complement(19305053..19305609) FT /rpt_family="ALU" FT repeat_region complement(19305847..19306004) FT /rpt_family="ALU" FT repeat_region complement(19306140..19306408) FT /rpt_family="ALU" FT repeat_region complement(19306552..19306850) FT /rpt_family="ALU" FT repeat_region 19307107..19307698 FT /rpt_family="ALU" FT misc_feature 19307775..19307855 FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT misc_feature 19307995..19308060 FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT misc_feature 19308330..19308430 FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT repeat_region 19308547..19308836 FT /rpt_family="ALU" FT misc_feature 19308916..19309041 FT /standard_name="putative exon" FT /note="Xgrail 1.3c, quality= excellent" FT CDS join(<19307775..19307855,19307995..19308060, FT 19308330..19308430,19308916..19309041,19309466..19309532, FT 19309963..19310043,19312458..19312528) FT /codon_start=3 FT /product="F14150_1" FT /note="Hypothetical partial protein; Hypotthetical partial FT peptide with ankyrin-like motifs. Most similar to S30385 FT (G9a protein - human /gi|287865; PVal= 5.2e-19) and FT (L40632) ankyrin 3 [Mus musculus]; PVal= 1.7e-16" FT /protein_id="AAB86654.1" FT /translation="SSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEH FT LRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG FT YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPM FT DLAVALGYRKVQQVIENHILKLFQSNLVPADPE" FT misc_feature 19309963..19310043 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to AA290933 zs45c10.r1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone 700434 5' similar to SW:ANKC_HUMAN FT Q01485 ANKYRIN, BRAIN VARIANT 2 ; (304..383); 99% FT identity.~~Other overlapping matches:~DDS similarity to FT AA411028 zv40f01.s1 Soares ovary tumor NbHOT Homo sapiens FT cDNA clone 756121 3' similar to TR:G710549 G710549 ANKYRIN FT 3. ;(297..217); 100% identity.~~BLASTN similarity to T12132 FT (211..113); match: 0.91, score: 2.4e-50; database searched: FT est; A663R Homo sapiens cDNA clone A663." FT repeat_region complement(19310809..19312176) FT /rpt_family="Alu" FT misc_feature 19312222..19312865 FT /note="Several EST matches, including:~AA147752 zl50g01.s1 FT Soares pregnant uterus NbHPU Homo sapiens cDNA clone 505392 FT 3';Score: 904 Identity: 464/468 (99%) .~AA085586 FT zl83d10.s1 Stratagene colon (#937204) Homo sapiens cDNA FT clone 511219 3'Score: 987 Identity: 510/516 (98%).~N66652 FT yy71a02.s1 Homo sapiens cDNA clone 278954 3'.~Score: 887 FT Identity: 460/469 (98%).~" FT misc_feature 19312458..19312673 FT /note="DDS similarity to AA411028 zv40f01.s1 Soares ovary FT tumor NbHOT Homo sapiens cDNA clone 756121 3' similar to FT TR:G710549 G710549 ANKYRIN 3. ;(216..1); 99% FT identity~~(5137..5268)DDS similarity to AA290933 zs45c10.r1 FT NCI_CGAP_GCB1 Homo sapiens cDNA clone 700434 5' similar to FT SW:ANKC_HUMAN Q01485 ANKYRIN, BRAIN VARIANT 2 ;(384..515); FT 100% identity.~~Other overlapping matches:~BLASTN FT similarity to T12132 (126..5); match: 0.94, score: 2.8e-35; FT database searched: est; A663R Homo sapiens cDNA clone FT A663.~~and others..." FT misc_feature complement(19312739..19312833) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~~Other FT overlapping matches:~(5528..5211) DDS similarity to FT AA311632 EST182361 Jurkat T-cells VI Homo sapiens cDNA FT (251..568); 100% identity." FT misc_feature complement(19313139..19313207) FT /note="DDS similarity to AA311632 EST182361 Jurkat T-cells FT VI Homo sapiens cDNA (182..250); 100% identity.~~Other FT overlapping matches:~(5886..5422) DDS similarity to FT AA129372 zn84h07.r1 Stratagene lung carcinoma 937218 Homo FT sapiens cDNA clone 564925 5' (108..572); 99% identity; FT incompletely spliced?~" FT misc_feature complement(19313278..19313383) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 90.000~~Other FT overlapping matches:~(6065..5958) DDS similarity toAA129372 FT zn84h07.r1 Stratagene lung carcinoma 937218 Homo sapiens FT cDNA clone 564925 5' (1..107); 99% identity.~" FT misc_feature complement(19313600..19313690) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to AA311632 EST182361 Jurkat T-cells VI Homo FT sapiens cDNA (91..181); 100% identity." FT misc_feature complement(19313832..19313921) FT /note="DDS similarity to AA311632 EST182361 Jurkat T-cells FT VI Homo sapiens cDNA (1..90); 100% identity." FT repeat_region complement(19314467..19315078) FT /rpt_family="Alu" FT repeat_region complement(19315424..19315695) FT /rpt_family="Alu" FT misc_feature complement(19315786..19315974) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 65.000" FT repeat_region 19316628..19316692 FT /rpt_family="MIR" FT repeat_region complement(19319605..19319855) FT /rpt_family="Alu" FT repeat_region complement(19319882..19320163) FT /rpt_family="Alu" FT repeat_region complement(19320597..19321186) FT /rpt_family="Alu" FT repeat_region complement(19321429..19321719) FT /rpt_family="Alu" FT repeat_region 19321808..19322098 FT /rpt_family="Alu" FT misc_feature 19322003..19322343 FT /note="DDS similarity to H13990 EST00016 Homo sapiens FT genomic clone C2-5 5'. Score: 238 Identity: 147/153 (96%)" FT repeat_region 19322439..19322525 FT /rpt_family="MIR" FT repeat_region complement(19325398..19325472) FT /rpt_family="MIR" FT misc_feature 19325675..19325848 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 59.000" FT repeat_region complement(19326800..19326867) FT /rpt_family="MIR" FT repeat_region complement(19326983..19327543) FT /rpt_family="Alu" FT repeat_region 19327575..19327668 FT /rpt_family="MIR" FT misc_feature 19327763..19327835 FT /gene="NEUR" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 92.000~~Other FT overlapping matches:~(20460..20514) DDS similarity to FT H39035 yp65g02.s1 Homo sapiens cDNA clone 192338 3' FT (1..55); 87% identity.~~(20460..20514) DDS similarity to FT H14064 ym63a04.s3 Homo sapiens cDNA clone 163566 3' similar FT to SP:S2~8764 S28764 NEUROCAN - (1..55); 93% identity." FT gene 19327763..>19339399 FT /gene="NEUR" FT /note="neurocan chondroitin sulfate proteoglycan" FT CDS join(19327763..19327835,19329724..19330125, FT 19334830..19335004,19335115..19335242,19335786..19336079, FT 19337295..19337882,19338090..>19339399) FT /codon_start=1 FT /gene="NEUR" FT /product="PGCN_HUMAN" FT /note="NEUROCAN CORE PROTEIN PRECURSOR; Human homolog of FT mouse neurocan core protein precursor gene FT (X84727)-incomplete coding sequence; human and mouse share FT 60% identity at residue level over first 2/3 of protein" FT /protein_id="AAB86655.1" FT /translation="MGAPFVWALGLLMLQMLLFVAGEQGTQDITDASERGLHMQKLGSG FT SVQAALAELVALPCLFTLQPRPSAARDAPRIKWTKVRTASGQRQDLPILVAKDNVVRVA FT KSWQGRVSLPSYPRRRANATLLLGPLRASDSGLYRCQVVRGIEDEQDLVPLEVTGVVFH FT YRSARDRYALTFAEAQEACRLSSAIIAAPRHLQAAFEDGFDNCDAGWLSDRTVRYPITQ FT SRPGCYGDRSSLPGVRSYGRRNPQELYDVYCFARELGGEVFYVGPARRLTLAGARAQCR FT RQGAALASVGQLHLAWHEGLDQCDPGWLADGSVRYPIQTPRRRCGGPAPGVRTVYRFAN FT RTGFPSPAERFDAYCFRAHHPTSQHGDLETPSSGDEGEILSAEGPPVRELEPTLEEEEV FT VTPDFQEPLVSSGEEETLILEEKQESQQTLSPTPGDPMLASWPTGEVWLSTVAPSPSDM FT GAGTAASSHTEVAPTDPMPRRRGRFKGLNGRYFQQQEPEPGLQGGMEASAQPPTSEAAV FT NQMEPPLAMAVTEMLGSGQSRSPWADLTNEVDMPGAGSAGGKSSPEPWLWPPTMVPPSI FT SGHSRAPVLELEKAEGPSARPATPDLFWSPLEATVSAPSPAPWEAFPVATSPDLPMMAM FT LRGPKEWMLPHPTPISTEANRVEAHGEATATAPPSPAAETKVYSLPLSLTPTGQGGEAM FT PTTPESPRADFRETGETSPAQVNKAEHSSSSPWPSVNRNVAVGFVPTETATEPTGLRGI FT PGSESGVFDTAESPTSGLQATVDEVQDPWPSVYSKGLDASSPSAPLGSPGVFLVPKVTP FT NLEPWVATDEGPTVNPMDSTVTPAPSDASGIWEPGSQVFEEAESTTLSPQVALDTSIVT FT PLTTLEQGDKVGVPAMSTLGSSSSQPHPEPEDQVETQGTSGASVPPHQSSPLGKPAVPP FT GTPTAASVGESASVSSGEPTVPWDPSSTLLPVTLGIEDFELEVLAGSPGVESFWEEVAS FT G" FT repeat_region 19328546..19329265 FT /rpt_family="Alu" FT repeat_region complement(19329281..19329560) FT /rpt_family="Alu" FT misc_feature 19329724..19330125 FT /gene="NEUR" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 82.000~~Other FT overlapping matches:~(22403..22447) DDS similarity to FT H39035 yp65g02.s1 Homo sapiens cDNA clone 192338 3' FT (56..100); 100% identity.~(22403..22572) DDS similarity to FT H14064 ym63a04.s3 Homo sapiens cDNA clone 163566 3' similar FT to SP:S2~8764 S28764 NEUROCAN (56..225); 93% FT identity.~~BLASTX similarity to P55066 (29..158); match: FT 0.85, score: 1.7e-70; database searched: nr; NEUROCAN FT PRECURSOR pir||S52781 neurocan - mouse >gi|758630 (X84727) FT neurocan [Mus musculus]" FT repeat_region 19330242..19330499 FT /rpt_family="Alu" FT repeat_region 19330584..19330848 FT /rpt_family="Alu" FT repeat_region complement(19330970..19331036) FT /rpt_family="Alu" FT repeat_region complement(19331266..19331558) FT /rpt_family="Alu" FT repeat_region 19331628..19332355 FT /rpt_family="Alu" FT repeat_region 19332426..19332685 FT /rpt_family="Alu" FT repeat_region complement(19333104..19333367) FT /rpt_family="Alu" FT repeat_region 19333636..19333922 FT /rpt_family="Alu" FT repeat_region complement(19334275..19334569) FT /rpt_family="Alu" FT misc_feature 19334830..19335004 FT /gene="NEUR" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~BLASTX FT similarity to P55066 (159..216); match: 0.96, score: FT 2.1e-139; database searched: nr; NEUROCAN PRECURSOR FT pir||S52781 neurocan - mouse >gi|758630 (X84727) neurocan FT [Mus musculus]" FT misc_feature 19335115..19335242 FT /gene="NEUR" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 88.000~~BLASTX FT similarity to P55066 (215..260); match: 0.95, score: FT 2.1e-139; database searched: nr; NEUROCAN PRECURSOR FT pir||S52781 neurocan - mouse >gi|758630 (X84727) neurocan FT [Mus musculus]" FT misc_feature 19335786..19336079 FT /gene="NEUR" FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 98.000~~BLASTX FT similarity to P55066 (259..356); match: 0.95, score: FT 2.1e-139; database searched: nr; NEUROCAN PRECURSOR FT pir||S52781 neurocan - mouse >gi|758630 (X84727) neurocan FT [Mus musculus]" FT repeat_region complement(19336738..19337033) FT /rpt_family="Alu" FT misc_feature 19337295..19337882 FT /gene="NEUR" FT /note="BLASTX similarity to P55067 (357..550); match: 0.56, FT score: 1.9e-108; database searched: nr; NEUROCAN PRECURSOR FT (245 KD EARLY POSTNATAL CORE GLYCOPROTEIN) (CONTAINS: 150 FT KD ADULT CORE GLYCOPROTEIN)~~BLASTX similarity to P55066 FT (357..550); match: 0.65, score: 3.4e-113; database FT searched: nr; NEUROCAN PRECURSOR pir||S52781 neurocan - FT mouse >gi|758630 (X84727) neurocan [Mus FT musculus]~~(30335..30561) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: good, score: FT 65.000~~" FT misc_feature 19338090..19339567 FT /note="Composite of EST and BLAST matches:~(30769..31795) FT BLASTX similarity to P55067 (551..884); match: 0.46, score: FT 1.9e-108; database searched: nr; NEUROCAN PRECURSOR (245 KD FT EARLY POSTNATAL CORE GLYCOPROTEIN) (CONTAINS: 150 KD ADULT FT CORE GLYCOPROTEIN)~(31011..32246) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 80.000~~Other overlapping matches:~(31038..31238) DDS FT similarity to Z42170|HSC0BC101 H. sapiens partial cDNA FT sequence; clone c-0bc10.~Score: 382 Identity: 196/201 FT (97%).~~(31666..32125) DDS similarity to R56456 yg93c09.r1 FT Homo sapiens cDNA clone 41261 5' similar to SP:S28~764 FT S28764 NEUROCAN - (1..469); Score: 819 Identity: 449/469 FT (95%)" FT repeat_region 19339735..19340026 FT /rpt_family="Alu" FT repeat_region 19340617..19340744 FT /rpt_family="Alu" FT repeat_region complement(19340854..19341141) FT /rpt_family="Alu" FT repeat_region complement(19341213..19341415) FT /rpt_family="Alu" FT misc_feature 19341456..19341494 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: marginal, score: 46.000" FT repeat_region complement(19341541..19341832) FT /rpt_family="Alu" FT repeat_region complement(19342140..19342428) FT /rpt_family="Alu" FT repeat_region 19342508..19342799 FT /rpt_family="Alu" FT repeat_region 19343461..19343590 FT /rpt_family="MER3" FT repeat_region complement(19343753..19344030) FT /rpt_family="Alu" FT repeat_region complement(19376259..19376517) FT /rpt_family="Alu" FT misc_feature complement(19377299..19377418) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~Other FT overlapping matches: (11888..11769) DDS similarity to FT AA473108 vd44h04.r1 Barstead MPLRB1 Mus musculus cDNA clone FT 803479 5' (352..471); 92% identity.~(11888..11769) W35723 FT mc15a07.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone FT 348564 5' (111..230); 84% identity." FT repeat_region 19377896..19378194 FT /rpt_family="Alu" FT misc_feature complement(19378430..19378522) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 96.000~Other FT overlapping matches: (12992..12900) DDS similarity to FT AA473108 vd44h04.r1 Barstead MPLRB1 Mus musculus cDNA clone FT 803479 5' (259..351); 90% identity.~(13009..12900) W35723 FT mc15a07.r1 Soares mouse p3NMF19.5 Mus musculus cDNA clone FT 348564 5' (1..110); 86% identity.~(12992..12905) H13986 FT EST00012 Homo sapiens genomic clone C1-32 5' (104..186); FT 93% identity.~(12992..12900) H14020 EST00047 Homo sapiens FT genomic clone C1-2 5' (107..191); 86% identity." FT misc_feature complement(19378795..19378896) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 97.000~Other FT overlapping matches: (13366..13265) DDS similarity to FT AA473108 vd44h04.r1 Barstead MPLRB1 Mus musculus cDNA clone FT 803479 5' (157..258); 77% identity.~(13366..13265) H13986 FT EST00012 Homo sapiens genomic clone C1-32 5' (1..103); 98% FT identity.~(13366..13264)H14020 EST00047 Homo sapiens FT genomic clone C1-2 5' (1..106); 88% identity." FT repeat_region complement(19379018..19379308) FT /rpt_family="Alu" FT misc_feature complement(19379439..19379570) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 97.000~Other FT overlapping matches: (14064..13909) AA473108 vd44h04.r1 FT Barstead MPLRB1 Mus musculus cDNA clone 803479 5' (1..156); FT 72% identity." FT repeat_region complement(19379649..19379920) FT /rpt_family="Alu" FT misc_feature complement(19380496..19380578) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 94.000" FT misc_feature complement(19380982..19381085) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~Other FT overlapping matches: (15555..15465) DDS similarity to FT AA255036 mz79a03.r1 Soares mouse NML Mus musculus cDNA FT clone 719596 5' (307..397); 79% identity." FT misc_feature complement(19381154..19381251) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~Other FT overlapping matches: (15721..15624) DDS similarity to FT AA255036 mz79a03.r1 Soares mouse NML Mus musculus cDNA FT clone 719596 5' (209..306); 81% identity." FT misc_feature complement(19381831..19381934) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000~Other FT overlapping matches: (16404..16301) DDS similarity to FT AA255036 mz79a03.r1 Soares mouse NML Mus musculus cDNA FT clone 719596 5' (105..208); 78% identity." FT repeat_region complement(19382358..19382634) FT /rpt_family="Alu" FT misc_feature complement(19383930..19384108) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 84.000~Other FT overlapping matches: (18503..18400) DDS similarity to FT AA255036 mz79a03.r1 Soares mouse NML Mus musculus cDNA FT clone 719596 5' (1..104); 77% identity." FT repeat_region complement(19384626..19384893) FT /rpt_family="Alu" FT CDS complement(join(19387457..19387483,19387756..19387885, FT 19388543..19388688,19389499..19389605,19390022..19390199, FT 19390994..19391100,19407798..19408153,19413074..19413197, FT 19414157..19414257,19414533..19414656,19416658..19416836, FT 19420932..19421009,19427231..>19427402)) FT /codon_start=3 FT /product="F23858_1" FT /note="Hypothetical human protein; Similar to novel FT proteins encoded by (AC004447) KIAA0365 [Homo sapiens] and FT (Y08265) DAN26 [Homo sapiens]" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAC08052.1" FT /translation="KANRWFGVAPPKSGKMNMNILHQEELIAQKKREIEAKMEQKAKQN FT QVASPQPPHPGEITNAHNSSCISNKFANDGSFLQQFLNAGKRSLLISRRTGLGLASLPG FT PVKSYSHAKQLPVAHRPSVFQSPDEDEEEDYEQWLEIKVSPPEGAETRKVIEKLARFVA FT EGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRKEAQKSQAASQKVSPPE FT DEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFRK FT AKASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAPAAPGKPASAA FT TVKRKRKSRWGPEEDKVELPPAELVQRDVDASPSPLSVQDLKGLGYEKGKPVGLVGVTE FT LSDAQKKQLKEQQEMQQMYDMIMQHKRAMQDMQLLWEKAVQQHQHGYDSDEEVDSELGT FT WEHQLRRMEMDKTREWAEQLTKMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSE FT YKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGAGFGIDRPAELS FT KEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY" FT misc_feature complement(19387756..19387885) FT /note="DDS similarity to overlapping ESTs:~AA435539 FT zt85e04.s1 Soares testis NHT Homo sapiens cDNA clone 729150 FT 3' similar to TR:G1184064 G1184064 DXS8237E ; (293..164); FT 98% identity.~~N31236 yx53f03.r1 Homo sapiens cDNA clone FT 265469 5'; (140..265); 96% identity.~~T90095 yd39d08.s1 FT Homo sapiens cDNA clone 110607 3'; (263..135); 98% FT identity.~~AA478829 zv09f05.r1 Soares NhHMPu S1 Homo FT sapiens cDNA clone 753153 5' similar to TR:G1184064 FT G1184064 DXS8237E ; (202..330); 99% identity.~~predicted FT exon, program: grail2exons_human_1.3, frame: 1, quality: FT excellent, score: 100.000~~BLASTN similarity to AA853263 FT (257..301); match: 1, score: 7.6e-89; database searched: FT month.na; NHTBCae04e03f1 Normal Human Trabecular Bone Cells FT Homo sapiens cDNA clone NHTBCae04e03" FT /note="DDS similarity to overlapping ESTs:~AA435539 FT zt85e04.s1 Soares testis NHT Homo sapiens cDNA clone 729150 FT 3' similar to TR:G1184064 G1184064 DXS8237E ; (293..164); FT 98% identity.~~N31236 yx53f03.r1 Homo sapiens cDNA clone FT 265469 5'; (140..265); 96% identity.~~T90095 yd39d08.s1 FT Homo sapiens cDNA clone 110607 3'; (263..135); 98% FT identity.~~AA478829 zv09f05.r1 Soares NhHMPu S1 Homo FT sapiens cDNA clone 753153 5' similar to TR:G1184064 FT G1184064 DXS8237E ; (202..330); 99% identity.~~BLASTN FT similarity to AA853263 (257..301); match: 1, score: FT 7.6e-89; database searched: month.na; NHTBCae04e03f1 Normal FT Human Trabecular Bone Cells Homo sapiens cDNA clone FT NHTBCae04e03" FT repeat_region complement(19388047..19388074) FT /rpt_family="GC_rich" FT misc_feature complement(19388543..19388688) FT /note="DDS similarity to overlapping ESTs:~(2506..2361) FT AA478829 zv09f05.r1 Soares NhHMPu S1 Homo sapiens cDNA FT clone 753153 5' similar to TR:G1184064 G1184064 DXS8237E ; FT (56..201); 100% identity.~~(2506..2361) H81211 yu99f11.r1 FT Homo sapiens cDNA clone 241389 5'; (160..305); 98% FT identity.~~~(2490..2361) AA435539 zt85e04.s1 Soares testis FT NHT Homo sapiens cDNA clone 729150 3' similar to FT TR:G1184064 G1184064 DXS8237E ; (423..294); 100% FT identity.~~(2506..2388) AA230751 my32e11.r1 Barstead mouse FT pooled organs MPLRB4 Mus musculus cDNA clone 697580 5'; FT (422..540); 89% identity.~~(2500..2361) N31236 yx53f03.r1 FT Homo sapiens cDNA clone 265469 5'; (1..139); 94% FT identity.~~(2404..2361) T90095 yd39d08.s1 Homo sapiens cDNA FT clone 110607 3'; (307..264); 93% identity.~~(" FT misc_feature complement(19388551..19388688) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 88.000" FT misc_feature complement(19389499..19389605) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(3423..3317) H81211 FT yu99f11.r1 Homo sapiens cDNA clone 241389 5'; (53..159); FT 100% identity.~~(3423..3317) AA230751 my32e11.r1 Barstead FT mouse pooled organs MPLRB4 Mus musculus cDNA clone 697580 FT 5'; (315..421); 91% identity.~~(3371..3317) AA478829 FT zv09f05.r1 Soares NhHMPu S1 Homo sapiens cDNA clone 753153 FT 5' similar to TR:G1184064 G1184064 DXS8237E ; (1..55); 100% FT identity.~" FT misc_feature complement(19390022..19390199) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 91.000~~DDS similarity FT to overlapping ESTs:~(4017..3840) AA230751 my32e11.r1 FT Barstead mouse pooled organs MPLRB4 Mus musculus cDNA clone FT 697580 5'; (137..314); 90% identity.~~(3893..3840) H81211 FT yu99f11.r1 Homo sapiens cDNA clone 241389 5'; (1..52); 88% FT identity.~~AA373090 EST85334 HSC172 cells I Homo sapiens FT cDNA 5' end; (50..227); 98% identity." FT misc_feature complement(19390994..19391100) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~(4944..4812) AA230751 FT my32e11.r1 Barstead mouse pooled organs MPLRB4 Mus musculus FT cDNA clone 697580 5'; (1..136); 83% identity.~~(4860..4812) FT AA373090 EST85334 HSC172 cells I Homo sapiens cDNA 5' end; FT (1..49); 98% identity." FT repeat_region complement(19391333..19391423) FT /rpt_family="MIR" FT repeat_region complement(19392790..19393088) FT /rpt_family="AluSx" FT repeat_region 19393126..19393266 FT /rpt_family="FLAM_C" FT repeat_region 19393298..19393433 FT /rpt_family="MER7B" FT repeat_region 19393434..19393602 FT /rpt_family="TIGGER2" FT repeat_region 19393605..19393899 FT /rpt_family="AluY" FT repeat_region 19393903..19394071 FT /rpt_family="TIGGER2" FT repeat_region complement(19394082..19394260) FT /rpt_family="AluSg" FT repeat_region complement(19394263..19394562) FT /rpt_family="AluSx" FT repeat_region complement(19394565..19394692) FT /rpt_family="AluSg" FT repeat_region 19394695..19394955 FT /rpt_family="TIGGER2" FT repeat_region 19394979..19395111 FT /rpt_family="AluSg/x" FT repeat_region 19395112..19395680 FT /rpt_family="TIGGER2" FT repeat_region complement(19395681..19395975) FT /rpt_family="AluY" FT repeat_region complement(19395985..19396275) FT /rpt_family="AluSx" FT repeat_region 19396279..19396370 FT /rpt_family="TIGGER2" FT repeat_region complement(19396375..19396673) FT /rpt_family="AluJb" FT repeat_region 19396675..19397406 FT /rpt_family="TIGGER2" FT repeat_region 19397571..19397729 FT /rpt_family="AluSx" FT repeat_region 19397774..19397797 FT /rpt_family="(CAA)n" FT repeat_region 19397802..19398083 FT /rpt_family="AluSx" FT repeat_region 19398093..19398379 FT /rpt_family="AluSx" FT repeat_region 19398390..19398858 FT /rpt_family="TIGGER2" FT repeat_region 19398888..19398974 FT /rpt_family="AluSp/q" FT repeat_region complement(19399007..19399146) FT /rpt_family="FRAM" FT repeat_region 19399165..19399324 FT /rpt_family="MER28" FT repeat_region 19399326..19399573 FT /rpt_family="AluJb" FT repeat_region complement(19399594..19399892) FT /rpt_family="AluSg" FT repeat_region 19399893..19399958 FT /rpt_family="MER28" FT repeat_region 19399959..19400128 FT /rpt_family="MER7A" FT repeat_region 19400129..19400274 FT /rpt_family="AluSq/x" FT repeat_region 19400275..19400576 FT /rpt_family="AluSx" FT repeat_region complement(19400612..19400725) FT /rpt_family="MER21B" FT repeat_region 19401173..19401471 FT /rpt_family="AluSq" FT repeat_region complement(19401587..19401633) FT /rpt_family="(TAAA)n" FT repeat_region 19401646..19401945 FT /rpt_family="AluSg" FT repeat_region 19401948..19402415 FT /rpt_family="L1" FT repeat_region 19402417..19402702 FT /rpt_family="AluY" FT repeat_region 19402703..19402742 FT /rpt_family="(CA)n" FT repeat_region 19402801..19403101 FT /rpt_family="AluSx" FT repeat_region 19403106..19403228 FT /rpt_family="L1" FT repeat_region 19403229..19403494 FT /rpt_family="AluSq" FT repeat_region 19403496..19403709 FT /rpt_family="L1" FT repeat_region complement(19403714..19404018) FT /rpt_family="AluSx" FT repeat_region 19404021..19404101 FT /rpt_family="L1" FT repeat_region 19404114..19404407 FT /rpt_family="AluSx" FT repeat_region 19404408..19404709 FT /rpt_family="L1" FT repeat_region 19404712..19405014 FT /rpt_family="AluJb" FT repeat_region 19405053..19405336 FT /rpt_family="AluJb" FT repeat_region 19405337..19405500 FT /rpt_family="L1MB6" FT repeat_region 19405652..19405829 FT /rpt_family="L1MB6" FT repeat_region 19405831..19405948 FT /rpt_family="FLAM_C" FT repeat_region 19405956..19406131 FT /rpt_family="AluSx" FT repeat_region 19406132..19406434 FT /rpt_family="AluSg" FT repeat_region 19406439..19406487 FT /rpt_family="AluSx" FT repeat_region 19406489..19406686 FT /rpt_family="AluJo" FT repeat_region 19406697..19406847 FT /rpt_family="L1MB6" FT repeat_region 19406856..19406966 FT /rpt_family="AluJb" FT repeat_region 19406987..19407081 FT /rpt_family="L1MB6" FT repeat_region 19407083..19407201 FT /rpt_family="AluSq/x" FT repeat_region 19407203..19407475 FT /rpt_family="AluY" FT repeat_region 19407482..19407761 FT /rpt_family="L1MB6" FT misc_feature complement(19408031..19408153) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 84.000~~DDS similarity FT to overlapping ESTs:~(21971..21898) A624768 vn91c02.r1 FT Stratagene mouse heart (#937316) Mus musculus cDNA clone FT 1039298 5' similar to TR:G899298 G899298 HUMAN SPLICING FT FACTOR; (503..576); 85% identity.~(21971..21785) R52170 FT yg85a05.r1 Homo sapiens cDNA clone 40189 5'; (282..475); FT 91% identity.~~(21928..21626) |AA326545 EST29825 Cerebellum FT II Homo sapiens cDNA 5' end. Score: 582 Identity: 297/303 FT (98%).~~(21977..21675) AA353879 EST62063 Jurkat T-cells V FT Homo sapiens cDNA 5' end. Score: 583 Identity: 299/304 FT (98%)." FT misc_feature complement(19408541..19408987) FT /note="DDS similarity to R17105 EST20k12 Clontech adult FT human fat cell library HL1108A Homo sapiens cDNA clone FT 20k12. Score: 875 Identity: 444/448 (99%)." FT repeat_region 19409025..19409320 FT /rpt_family="AluSx" FT repeat_region complement(19410180..19410490) FT /rpt_family="AluY" FT repeat_region complement(19410598..19410886) FT /rpt_family="AluSp" FT repeat_region complement(19410890..19411184) FT /rpt_family="AluSx" FT misc_feature complement(19413074..19413197) FT /note="DDSs similarity to overlapping ESTs:~R52170 FT yg85a05.r1 Homo sapiens cDNA clone 40189 5'; (157..281); FT 98% identity.~~A624768 vn91c02.r1 Stratagene mouse heart FT (#937316) Mus musculus cDNA clone 1039298 5' similar to FT TR:G899298 G899298 HUMAN SPLICING FACTOR; (379..502); 93% FT identity. ~~(27003..26892) predicted exon, program: FT grail2exons_human_1.3, frame: 1, quality: excellent, score: FT 100.000" FT misc_feature complement(19414157..19414257) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 67.000~~DDS similarity to FT overlapping ESTs:~R52170 yg85a05.r1 Homo sapiens cDNA clone FT 40189 5'; (56..156); 100% identity.~~A624768 vn91c02.r1 FT Stratagene mouse heart (#937316) Mus musculus cDNA clone FT 1039298 5' similar to TR:G899298 G899298 HUMAN SPLICING FT FACTOR; (278..378); 84% identity. ~" FT misc_feature complement(19414533..19414656) FT /note="DDS similarity to overlapping ESTs:~(28474..28351) FT A624768 vn91c02.r1 Stratagene mouse heart (#937316) Mus FT musculus cDNA clone 1039298 5' similar to TR:G899298 FT G899298 HUMAN SPLICING FACTOR; (154..277); 94% FT identity.~(28405..28351) R52170 yg85a05.r1 Homo sapiens FT cDNA clone 40189 5'; (1..55); 98% identity.~~(28462..28351) FT predicted exon, program: grail2exons_human_1.3, frame: 0, FT quality: good, score: 70.000" FT repeat_region complement(19415114..19415400) FT /rpt_family="L1MC4" FT misc_feature complement(19416658..19416836) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 91.000~~DDS similarity FT to:~(30628..30476) A624768 vn91c02.r1 Stratagene mouse FT heart (#937316) Mus musculus cDNA clone 1039298 5' similar FT to TR:G899298 G899298 HUMAN SPLICING FACTOR; (1..153); 85% FT identity." FT repeat_region complement(19417020..19417056) FT /rpt_family="MIR" FT repeat_region complement(19417857..19418157) FT /rpt_family="AluJo" FT repeat_region complement(19418466..19418771) FT /rpt_family="AluSx" FT repeat_region complement(19418837..19419143) FT /rpt_family="AluSx" FT misc_feature 19419373..19419503 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 69.000" FT repeat_region complement(19419679..19419975) FT /rpt_family="AluSq" FT repeat_region 19420012..19420301 FT /rpt_family="AluJo" FT repeat_region 19420307..19420437 FT /rpt_family="AluY" FT repeat_region 19420438..19420730 FT /rpt_family="AluY" FT repeat_region complement(19420731..19420757) FT /rpt_family="AT_rich" FT misc_feature complement(19420914..19421009) FT /note="DDS similarity to overlapping ESTs:~(34827..34732) FT AA190696 zp89a02.r1 Stratagene HeLa cell s3 937216 Homo FT sapiens cDNA clone 627338 5'; (196..295); 93% FT identity.~~(34827..34768) AA205891 zq47a04.r1 Stratagene FT hNT neuron (#937233) Homo sapiens cDNA clone 632814 5'; FT (172..231); 90% identity.~~BLASTN similarity to AA853264 FT (142..245); match: 1, score: 1.0e-34; database searched: FT month.na; NHTBCae04e03r1 Normal Human Trabecular Bone Cells FT Homo sapiens cDNA clone NHTBCae04e03" FT misc_feature 19421070..19421211 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 86.000" FT repeat_region complement(19421454..19421751) FT /rpt_family="AluSx" FT repeat_region complement(19421754..19422000) FT /rpt_family="AluJo" FT repeat_region 19422255..19422555 FT /rpt_family="AluY" FT repeat_region 19422624..19422805 FT /rpt_family="AluJo" FT repeat_region 19422846..19423052 FT /rpt_family="AluJb" FT repeat_region 19423515..19423816 FT /rpt_family="AluY" FT repeat_region 19423817..19423839 FT /rpt_family="AT_rich" FT repeat_region 19423921..19424218 FT /rpt_family="AluSx" FT repeat_region 19424238..19424527 FT /rpt_family="AluJo" FT repeat_region 19424530..19424661 FT /rpt_family="AluSx" FT repeat_region 19424665..19424964 FT /rpt_family="AluSx" FT repeat_region 19424974..19425143 FT /rpt_family="AluSx" FT repeat_region complement(19425144..19425171) FT /rpt_family="AT_rich" FT repeat_region 19425562..19425849 FT /rpt_family="AluSp" FT repeat_region 19425860..19426156 FT /rpt_family="AluJo" FT repeat_region complement(19426639..19426938) FT /rpt_family="AluSx" FT misc_feature complement(19427231..19427402) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000~~DDS FT similarity to overlapping ESTs:~AA190696 zp89a02.r1 FT Stratagene HeLa cell s3 937216 Homo sapiens cDNA clone FT 627338 5'; (22..195); 99% identity.~~AA205891 zq47a04.r1 FT Stratagene hNT neuron (#937233) Homo sapiens cDNA clone FT 632814 5'; (1..171); 99% identity.~~Other BLASTN EST FT matches: AA853264" FT repeat_region 19427665..19427965 FT /rpt_family="AluSx" FT repeat_region complement(19427975..19428215) FT /rpt_family="LINE2" FT CDS join(<19446527..19446544,19446931..19446996, FT 19447979..19448074,19449654..19449748,19451655..19451682, FT 19452061..19452216,19453344..19453490,19453585..19453675, FT 19454646..19454749,19456113..19456178,19459698..19459747, FT 19459964..19460041,19460134..19460245,19465164..19465254, FT 19466073..19466208,19478782..19478992) FT /codon_start=1 FT /product="R29828_1" FT /note="Hypothetical human protein (partial)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD03161.1" FT /translation="WLISQQIPQFEDVKFEAASLLSELYCQENSVDAAKPLLRKAIQIS FT QQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLL FT MERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQ FT LQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTD FT KALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEGLYCVSVNCMDNAE FT AQFTTALRLYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKRFLRETLK FT MSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLR FT DLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITVRVGHWEGIAATRLPV FT AFMEGQSTTTLYSADIWKHIQEDTEGSESAWAPVFRCEIKSLRPQTRAIILLPPLD" FT misc_feature 19447979..19448074 FT /note="DDS similarity to overlapping ESTs:~AA963316 FT UI-R-E1-gi-c-06-0-UI.s1 UI-R-E1 Rattus norvegicus cDNA FT clone UI-R-E1- gi-c-06-0-UI 3'; (304..399); 89% FT identity.~~AA893275 EST197078 Normalized rat kidney, Bento FT Soares Rattus sp. cDNA clone RKIBE38 3' end; (324..419); FT 89% identity.~~(6480..6660) predicted exon, program: FT grail2exons_human_1.3, frame: 2, quality: excellent, score: FT 76.000" FT misc_feature 19449654..19449748 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 94.000~~DDS similarity FT to overlapping ESTs:~(8155..8237) AA963316 FT UI-R-E1-gi-c-06-0-UI.s1 UI-R-E1 Rattus norvegicus cDNA FT clone UI-R-E1- gi-c-06-0-UI 3'; (400..482); 88% FT identity.~~(8155..8240) AA893275 EST197078 Normalized rat FT kidney, Bento Soares Rattus sp. cDNA clone RKIBE38 3' end; FT (420..505); 85% identity." FT repeat_region 19449850..19449976 FT /rpt_family="AluJb" FT repeat_region 19449979..19450267 FT /rpt_family="AluSc" FT misc_feature 19450277..19450336 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 83.000" FT repeat_region complement(19450371..19450495) FT /rpt_family="AluJb" FT repeat_region 19450551..19450695 FT /rpt_family="AluSx" FT repeat_region 19450696..19450992 FT /rpt_family="AluY" FT repeat_region 19450993..19451157 FT /rpt_family="AluSx" FT repeat_region 19451167..19451466 FT /rpt_family="AluY" FT misc_feature 19451655..19451682 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 86.000" FT misc_feature 19452061..19452220 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 100.000" FT misc_feature 19453344..19453490 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 97.000" FT misc_feature 19453585..19453675 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 96.000" FT misc_feature 19454646..19454749 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 19454939..19455240 FT /rpt_family="AluSx" FT misc_feature 19456113..19456178 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature 19457962..19458246 FT /note="DDS similarity to AA212842 mw82d12.r1 Soares mouse FT NML Mus musculus cDNA clone 677207 5'; (200..468); 80% FT identity." FT repeat_region 19458894..19459186 FT /rpt_family="AluJb" FT misc_feature 19459698..19459747 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 89.000" FT misc_feature 19459964..19460041 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature 19460134..19460245 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 97.000" FT repeat_region complement(19460785..19460808) FT /rpt_family="POLY_A" FT repeat_region 19460822..19461122 FT /rpt_family="AluSx" FT repeat_region 19461131..19461427 FT /rpt_family="AluSx" FT repeat_region 19461428..19461725 FT /rpt_family="AluY" FT repeat_region 19461733..19461840 FT /rpt_family="AluJo/FLAM" FT repeat_region complement(19461843..19462154) FT /rpt_family="AluJo" FT repeat_region 19462198..19462498 FT /rpt_family="AluJb" FT repeat_region complement(19462656..19462948) FT /rpt_family="AluSx" FT misc_feature 19465164..19465254 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 100.000" FT misc_feature 19466073..19466200 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 95.000" FT repeat_region 19468730..19468908 FT /rpt_family="AluJo" FT repeat_region complement(19469903..19470203) FT /rpt_family="AluSg" FT repeat_region 19470318..19470461 FT /rpt_family="AluJo" FT repeat_region 19470464..19470758 FT /rpt_family="AluSx" FT repeat_region 19470768..19470930 FT /rpt_family="AluSg/x" FT repeat_region 19470931..19471008 FT /rpt_family="AluJo" FT repeat_region complement(19471048..19471415) FT /rpt_family="L1MB6" FT repeat_region complement(19471421..19471717) FT /rpt_family="AluSg" FT repeat_region complement(19471718..19472005) FT /rpt_family="AluJb" FT repeat_region complement(19472008..19472111) FT /rpt_family="L1MB6" FT repeat_region complement(19472277..19472448) FT /rpt_family="AluJb" FT repeat_region complement(19472449..19472748) FT /rpt_family="AluSx" FT misc_feature complement(19473143..19473289) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 82.000" FT repeat_region 19473324..19473456 FT /rpt_family="AluJo/FRAM" FT repeat_region 19473469..19473667 FT /rpt_family="AluJo" FT repeat_region 19473668..19473714 FT /rpt_family="AluJo/FLAM" FT repeat_region 19473718..19474014 FT /rpt_family="AluSx" FT repeat_region 19474019..19474096 FT /rpt_family="AluS" FT repeat_region complement(19474099..19474122) FT /rpt_family="(CAAAA)n" FT repeat_region complement(19474125..19474413) FT /rpt_family="AluY" FT repeat_region 19474414..19474641 FT /rpt_family="AluSg" FT repeat_region 19474645..19474949 FT /rpt_family="AluSx" FT repeat_region 19474969..19475146 FT /rpt_family="AluSg/x" FT repeat_region complement(19475150..19475171) FT /rpt_family="AT_rich" FT repeat_region 19475179..19475467 FT /rpt_family="AluSx" FT repeat_region 19475470..19475633 FT /rpt_family="AluJb" FT repeat_region complement(19475737..19475962) FT /rpt_family="MLT1A1" FT repeat_region 19475963..19476265 FT /rpt_family="AluJb" FT repeat_region 19476267..19476609 FT /rpt_family="AluSq" FT repeat_region 19476643..19476773 FT /rpt_family="AluSq/x" FT repeat_region 19476774..19477075 FT /rpt_family="AluSq" FT repeat_region complement(19477221..19477521) FT /rpt_family="AluSq" FT repeat_region complement(19478072..19478164) FT /rpt_family="LINE2" FT repeat_region 19478305..19478601 FT /rpt_family="AluSq" FT misc_feature 19478782..19478906 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 71.000" FT repeat_region complement(19479467..19479488) FT /rpt_family="AT_rich" FT repeat_region 19479517..19479815 FT /rpt_family="AluY" FT repeat_region 19479816..19479922 FT /rpt_family="AluSg" FT repeat_region 19479923..19480210 FT /rpt_family="AluSx" FT repeat_region 19480224..19480519 FT /rpt_family="AluSx" FT repeat_region 19480531..19480823 FT /rpt_family="AluSq" FT repeat_region 19480848..19480978 FT /rpt_family="AluJb" FT repeat_region 19481046..19481347 FT /rpt_family="AluSx" FT repeat_region complement(19481348..19481373) FT /rpt_family="AT_rich" FT repeat_region complement(19481374..19481546) FT /rpt_family="AluJo" FT repeat_region complement(19481569..19481871) FT /rpt_family="AluSc" FT repeat_region complement(19481875..19481993) FT /rpt_family="AluJo" FT repeat_region complement(19482456..19482763) FT /rpt_family="AluSq" FT repeat_region complement(19482861..19482994) FT /rpt_family="FLAM_C" FT repeat_region complement(19482999..19483172) FT /rpt_family="AluJo" FT repeat_region complement(19483191..19483481) FT /rpt_family="AluSx" FT repeat_region complement(19483482..19483621) FT /rpt_family="AluJo" FT repeat_region complement(19483779..19483879) FT /rpt_family="MER53" FT repeat_region complement(19484164..19484459) FT /rpt_family="AluSq" FT repeat_region complement(19484466..19484619) FT /rpt_family="FRAM" FT repeat_region complement(19484633..19484934) FT /rpt_family="AluSg" FT repeat_region 19484962..19485075 FT /rpt_family="FLAM_A" FT repeat_region complement(19485081..19485381) FT /rpt_family="AluY" FT repeat_region 19485395..19485416 FT /rpt_family="AT_rich" FT repeat_region 19485420..19485723 FT /rpt_family="AluJb" FT repeat_region complement(19486363..19486543) FT /rpt_family="AluSg/x" FT repeat_region complement(19486562..19486842) FT /rpt_family="AluSx" FT repeat_region complement(19487002..19487306) FT /rpt_family="AluY" FT repeat_region complement(19487372..19487410) FT /rpt_family="(TA)n" FT repeat_region complement(19487422..19487575) FT /rpt_family="AluSc" FT repeat_region complement(19487587..19487896) FT /rpt_family="AluSp" FT repeat_region complement(19487897..19488028) FT /rpt_family="AluSc" FT repeat_region complement(19488169..19488452) FT /rpt_family="AluJo" FT repeat_region complement(19488899..19488944) FT /rpt_family="POLY_A" FT repeat_region complement(19488958..19489125) FT /rpt_family="AluSq" FT repeat_region complement(19489126..19489420) FT /rpt_family="AluY" FT repeat_region complement(19489423..19489567) FT /rpt_family="AluSq" FT repeat_region 19489721..19489997 FT /rpt_family="AluSg" FT repeat_region 19489998..19490299 FT /rpt_family="AluSq" FT repeat_region 19490301..19490470 FT /rpt_family="AluSg/x" FT repeat_region complement(19490787..19491087) FT /rpt_family="AluY" FT repeat_region complement(19491113..19491395) FT /rpt_family="AluSp" FT repeat_region complement(19491396..19491692) FT /rpt_family="AluSx" FT repeat_region complement(19491694..19491816) FT /rpt_family="AluJo" FT repeat_region 19492441..19492564 FT /rpt_family="FLAM_A" FT repeat_region 19492572..19492873 FT /rpt_family="AluSx" FT repeat_region 19493149..19493233 FT /rpt_family="FLAM_C" FT repeat_region complement(19493239..19493267) FT /rpt_family="AT_rich" FT repeat_region 19493276..19493574 FT /rpt_family="AluSg" FT repeat_region 19493577..19493749 FT /rpt_family="AluJo" FT repeat_region complement(19493789..19493892) FT /rpt_family="AluJb" FT repeat_region 19494087..19494365 FT /rpt_family="AluSx" FT repeat_region complement(19494395..19494695) FT /rpt_family="AluY" FT repeat_region complement(19494846..19495137) FT /rpt_family="AluSx" FT repeat_region complement(19495143..19495452) FT /rpt_family="AluJb" FT repeat_region 19496414..19496434 FT /rpt_family="GC_rich" FT repeat_region complement(19496707..19496852) FT /rpt_family="(CGG)n" FT repeat_region complement(19498132..19498427) FT /rpt_family="AluSx" FT repeat_region complement(19498868..19499165) FT /rpt_family="AluSp" FT repeat_region complement(19500573..19500872) FT /rpt_family="AluJb" FT repeat_region 19501143..19501193 FT /rpt_family="LINE2" FT repeat_region complement(19502095..19502165) FT /rpt_family="(GAAA)n" FT repeat_region complement(19502282..19502306) FT /rpt_family="AT_rich" FT misc_feature 19714020..19714093 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 81.000" FT repeat_region complement(19714120..19714369) FT /rpt_family="ALU" FT repeat_region 19714495..19714778 FT /rpt_family="ALU" FT repeat_region 19715008..19715287 FT /rpt_family="ALU" FT repeat_region complement(19715417..19715708) FT /rpt_family="ALU" FT repeat_region 19715905..19716227 FT /rpt_family="ALU" FT repeat_region 19716271..19716420 FT /rpt_family="ALU" FT repeat_region complement(19716462..19716565) FT /rpt_family="ALU" FT repeat_region 19717267..19717333 FT /rpt_family="MLT1" FT repeat_region 19717517..19717803 FT /rpt_family="ALU" FT repeat_region complement(19717864..19718137) FT /rpt_family="ALU" FT repeat_region 19718880..19719172 FT /rpt_family="ALU" FT repeat_region 19720098..19720666 FT /rpt_family="ALU" FT misc_feature complement(19720707..19720800) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: marginal, score: 42.000" FT repeat_region 19720950..19721199 FT /rpt_family="ALU" FT repeat_region 19721288..19721541 FT /rpt_family="ALU" FT repeat_region 19722208..19722505 FT /rpt_family="ALU" FT repeat_region 19722676..19723100 FT /rpt_family="ALU" FT repeat_region complement(19723648..19723920) FT /rpt_family="ALU" FT repeat_region 19723997..19724272 FT /rpt_family="ALU" FT repeat_region 19724881..19725145 FT /rpt_family="ALU" FT repeat_region 19725172..19725477 FT /rpt_family="ALU" FT repeat_region 19725571..19726166 FT /rpt_family="ALU" FT repeat_region 19726435..19726677 FT /rpt_family="ALU" FT misc_feature 19726715..19726959 FT /note="BLASTN similarity to T41418 (88..332); match: 0.95, FT score: 4.0e-87; database searched: est; ph1h3_19/1TV Homo FT sapiens cDNA clone ph1h3_19/1TV." FT misc_feature complement(19726771..19726806) FT /note="BLASTN similarity to T41379 (299..334); match: 0.72, FT score: 1.9e-133; database searched: est; ph1d3_19/1TV Homo FT sapiens cDNA clone ph1d3_19/1TV." FT misc_feature complement(19726781..19727103) FT /note="BLASTN similarity to T41379 (1..323); match: 0.99, FT score: 1.9e-133; database searched: est; ph1d3_19/1TV Homo FT sapiens cDNA clone ph1d3_19/1TV." FT misc_feature complement(19726801..19726848) FT /note="BLASTN similarity to T41320 (268..315); match: 0.97, FT score: 7.1e-117; database searched: est; ph1c2_19/1TV Homo FT sapiens cDNA clone ph1c2_19/1TV." FT misc_feature complement(19726848..19726882) FT /note="BLASTN similarity to T41320 (235..269); match: 1, FT score: 7.1e-117; database searched: est; ph1c2_19/1TV Homo FT sapiens cDNA clone ph1c2_19/1TV." FT misc_feature complement(19726884..19726973) FT /note="BLASTN similarity to T41320 (146..235); match: 0.93, FT score: 7.1e-117; database searched: est; ph1c2_19/1TV Homo FT sapiens cDNA clone ph1c2_19/1TV." FT misc_feature complement(19726965..19727043) FT /note="BLASTN similarity to T41320 (78..156); match: 1, FT score: 7.1e-117; database searched: est; ph1c2_19/1TV Homo FT sapiens cDNA clone ph1c2_19/1TV." FT misc_feature complement(19727045..19727103) FT /note="BLASTN similarity to T41320 (20..78); match: 1, FT score: 7.1e-117; database searched: est; ph1c2_19/1TV Homo FT sapiens cDNA clone ph1c2_19/1TV." FT repeat_region complement(19727145..19727404) FT /rpt_family="ALU" FT repeat_region complement(19727502..19727782) FT /rpt_family="ALU" FT repeat_region complement(19728082..19728381) FT /rpt_family="ALU" FT repeat_region 19728693..19728984 FT /rpt_family="ALU" FT misc_feature complement(19729319..19729437) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 78.000" FT repeat_region 19730438..19730700 FT /rpt_family="ALU" FT repeat_region 19731160..19731382 FT /rpt_family="ALU" FT repeat_region complement(19731618..19731905) FT /rpt_family="ALU" FT misc_feature 19798457..19799866 FT /note="NOTE: Small insert shatter libraries failed to FT resolve dinucleotide repeat region 67003-68412. Unsure FT number of repeat copies 67003-68412." FT repeat_region complement(20018354..20018635) FT /rpt_family="AluSx" FT misc_feature complement(20019080..20019127) FT /note="BLASTX similarity to (179..194); match: 0.43, FT score: 2.2e-16; database searched: nr; E1B FT 19K/Bcl-2-interacting protein Nip3 - human gi|558846 FT (U15174) BCL2/adenovirus E1B 19kD-interacting protein 3 FT [Homo sapiens]" FT misc_feature complement(20019112..20019279) FT /note="BLASTX similarity to (128..183); match: 0.64, FT score: 2.2e-16; database searched: nr; E1B FT 19K/Bcl-2-interacting protein Nip3 - human gi|558846 FT (U15174) BCL2/adenovirus E1B 19kD-interacting protein 3 FT [Homo sapiens]" FT repeat_region 20019370..20019672 FT /rpt_family="AluSp" FT misc_feature complement(20019684..20019761) FT /note="BLASTX similarity to (71..96); match: 0.73, score: FT 5.2e-29; database searched: nr; E1B 19K/Bcl-2-interacting FT protein Nip3 - human gi|558846 (U15174) BCL2/adenovirus E1B FT 19kD-interacting protein 3 [Homo sapiens]" FT misc_feature complement(20019754..20019792) FT /note="BLASTX similarity to (60..72); match: 0.84, score: FT 5.2e-29; database searched: nr; E1B 19K/Bcl-2-interacting FT protein Nip3 - human gi|558846 (U15174) BCL2/adenovirus E1B FT 19kD-interacting protein 3 [Homo sapiens]" FT misc_feature complement(20019809..20019946) FT /note="BLASTX similarity to (9..54); match: 0.69, score: FT 5.2e-29; database searched: nr; E1B 19K/Bcl-2-interacting FT protein Nip3 - human gi|558846 (U15174) BCL2/adenovirus E1B FT 19kD-interacting protein 3 [Homo sapiens]" FT repeat_region 20020123..20020526 FT /rpt_family="MER67C" FT repeat_region complement(20022562..20022857) FT /rpt_family="AluSg" FT repeat_region 20023317..20023337 FT /rpt_family="AT_rich" FT repeat_region 20023932..20024003 FT /rpt_family="MER5A" FT repeat_region complement(20024078..20024221) FT /rpt_family="MER5B" FT misc_feature complement(20024869..20025038) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 65.000" FT repeat_region complement(20025222..20025424) FT /rpt_family="L1MC4" FT repeat_region 20025593..20025680 FT /rpt_family="MER5A" FT mRNA join(20026098..20026215,20027369..20027464, FT 20037920..20044349) FT /product="Human Krueppel-related DNA-binding protein (TF34) FT gene, partial cds" FT CDS join(<20026098..20026215,20027369..20027464, FT 20043991..20045627) FT /codon_start=1 FT /product="BC273239_1" FT /note="HTF34-like ZNF gene" FT /protein_id="AAD22981.1" FT /translation="QFRDVAIEFSLEEWHCLDTAQRNLYRNVMLENYSNLVFLGIVVSK FT PDLIAHLEQGKKPLTMKRHEMVANPSVICSHFAQDLWPEQNIKDSFQKVILRRYEKRGH FT GNLQLIKRCESVDECKVHTGGYNGLNQCSTTTQSKVFQCDKYGKVFHKFSNSNRHNIRH FT TEKKPFKCIECGKAFNQFSTLITHKKIHTGEKPYICEECGKAFKYSSALNTHKRIHTGE FT KPYKCDKCDKAFIASSTLSKHEIIHTGKKPYKCEECGKAFNQSSTLTKHKKIHTGEKPY FT KCEECGKAFNQSSTLTKHKKIHTGEKPYVCEECGKAFKYSRILTTHKRIHTGEKPYKCN FT KCGKAFIASSTLSRHEFIHMGKKHYKCEECGKAFIWSSVLTRHKRVHTGEKPYKCEECG FT KAFKYSSTLSSHKRSHTGEKPYKCEECGKAFVASSTLSKHEIIHTGKKPYKCEECGKAF FT NQSSSLTKHKKIHTGEKPYKCEECGKAFNQSSSLTKHKKIHTGEKPYKCEECGKAFNQS FT STLIKHKKIHTREKPYKCEECGKAFHLSTHLTTHKILHTGEKPYRCRECGKAFNHSATL FT SSHKKIHSGEKPYECDKCGKAFISPSSLSRHEIIHTGEKP" FT repeat_region 20026376..20026666 FT /rpt_family="AluSx" FT repeat_region complement(20026874..20027205) FT /rpt_family="AluSg" FT repeat_region complement(20027867..20028252) FT /rpt_family="L1PA15" FT repeat_region complement(20028321..20028389) FT /rpt_family="(TAAA)n" FT repeat_region complement(20028396..20028623) FT /rpt_family="AluSq" FT repeat_region complement(20028691..20028766) FT /rpt_family="(GAAA)n" FT repeat_region complement(20028769..20034864) FT /rpt_family="L1PA2" FT repeat_region complement(20034894..20035199) FT /rpt_family="AluSq" FT repeat_region complement(20035397..20035699) FT /rpt_family="AluSp" FT repeat_region complement(20036092..20036217) FT /rpt_family="FLAM_C" FT repeat_region complement(20036888..20037187) FT /rpt_family="AluSx" FT repeat_region complement(20037297..20037478) FT /rpt_family="AluSg/x" FT repeat_region complement(20037857..20037919) FT /rpt_family="L1MB4" FT repeat_region 20037920..20038173 FT /rpt_family="AluJo" FT repeat_region complement(20038176..20038584) FT /rpt_family="L1MB2" FT repeat_region complement(20038586..20038855) FT /rpt_family="AluSq" FT repeat_region complement(20038987..20039149) FT /rpt_family="L1" FT repeat_region complement(20039340..20039618) FT /rpt_family="AluJo" FT repeat_region 20039753..20040152 FT /rpt_family="MSTB" FT repeat_region complement(20040184..20040399) FT /rpt_family="L1" FT repeat_region complement(20040402..20040465) FT /rpt_family="LTR13" FT repeat_region 20040466..20040766 FT /rpt_family="AluYa5" FT repeat_region complement(20040771..20041354) FT /rpt_family="LTR13" FT repeat_region complement(20041352..20041717) FT /rpt_family="LTR13" FT repeat_region complement(20041718..20041940) FT /rpt_family="L1" FT repeat_region complement(20041943..20041996) FT /rpt_family="(TAAA)n" FT repeat_region complement(20041997..20042299) FT /rpt_family="AluSq" FT repeat_region complement(20042303..20042338) FT /rpt_family="Alu" FT repeat_region complement(20042343..20042450) FT /rpt_family="AluJb" FT repeat_region complement(20042523..20042639) FT /rpt_family="(TAAAA)n" FT repeat_region 20042820..20043052 FT /rpt_family="AluSc" FT repeat_region complement(20043062..20043363) FT /rpt_family="L1MB2" FT repeat_region complement(20043477..20043761) FT /rpt_family="L1" FT misc_feature 20043991..20045627 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 75.000" FT repeat_region 20046294..20046543 FT /rpt_family="L1" FT repeat_region 20046561..20046860 FT /rpt_family="AluSx" FT repeat_region 20046896..20047172 FT /rpt_family="AluSc" FT repeat_region 20047185..20047547 FT /rpt_family="L1" FT repeat_region complement(20047639..20047716) FT /rpt_family="LINE2" FT misc_feature complement(20047922..20048017) FT /note="BLASTX similarity to P35789 (41..72); match: 0.84, FT score: 9.2e-34; database searched: nr; ZINC FINGER PROTEIN FT 93 (ZINC FINGER PROTEIN HTF34) >gi|1124876 (M61873) FT Krueppel-related DNA-binding protein [Homo" FT misc_feature complement(20048514..20048630) FT /note="BLASTX similarity to P35789 (1..39); match: 0.84, FT score: 9.2e-34; database searched: nr; ZINC FINGER PROTEIN FT 93 (ZINC FINGER PROTEIN HTF34) >gi|1124876 (M61873) FT Krueppel-related DNA-binding protein [Homo" FT repeat_region 20048842..20048880 FT /rpt_family="AT_rich" FT repeat_region complement(20049075..20049376) FT /rpt_family="AluSp" FT repeat_region 20049603..20049791 FT /rpt_family="L1MC4" FT repeat_region complement(20051231..20051340) FT /rpt_family="MIR" FT repeat_region 20052082..20052358 FT /rpt_family="AluSg" FT repeat_region complement(20053933..20054341) FT /rpt_family="MER67C" FT repeat_region 20055677..20055904 FT /rpt_family="HERVH" FT repeat_region complement(20056000..20056123) FT /rpt_family="(GGA)n" FT repeat_region 20056730..20058907 FT /rpt_family="HERVH" FT repeat_region 20059162..20060395 FT /rpt_family="HERVH" FT repeat_region 20061772..20061900 FT /rpt_family="HERVH" FT repeat_region 20061946..20062011 FT /rpt_family="L1PA8" FT repeat_region 20062013..20062329 FT /rpt_family="AluJb" FT repeat_region 20062341..20062459 FT /rpt_family="L1PA8" FT repeat_region 20062463..20062758 FT /rpt_family="AluSp" FT repeat_region 20062771..20063048 FT /rpt_family="L1PA13" FT repeat_region 20063646..20063937 FT /rpt_family="MER21B" FT repeat_region complement(20064176..20064470) FT /rpt_family="AluSq" FT repeat_region 20065054..20065311 FT /rpt_family="AluSp" FT repeat_region 20065320..20065384 FT /rpt_family="(CA)n" FT repeat_region complement(20065550..20065839) FT /rpt_family="AluSg" FT repeat_region complement(20066013..20066081) FT /rpt_family="AluS" FT repeat_region 20066312..20067297 FT /rpt_family="LTR5" FT repeat_region complement(20067880..20068112) FT /rpt_family="MER57_internal" FT repeat_region 20068219..20068441 FT /rpt_family="AluSx" FT repeat_region complement(20068442..20068523) FT /rpt_family="LTR8" FT repeat_region complement(20069499..20070138) FT /rpt_family="LTR13" FT repeat_region complement(20070137..20070502) FT /rpt_family="LTR13" FT repeat_region 20071120..20071770 FT /rpt_family="HERVL" FT repeat_region complement(20072296..20072396) FT /rpt_family="AluY" FT repeat_region 20072398..20073391 FT /rpt_family="LTR5" FT misc_feature 20073453..20073525 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 80.000" FT misc_feature 20073928..20074036 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 89.000" FT repeat_region complement(20075722..20076252) FT /rpt_family="L1P3/4" FT repeat_region complement(20076255..20076556) FT /rpt_family="AluSx" FT repeat_region complement(20076557..20077303) FT /rpt_family="L1P3/4" FT repeat_region 20077496..20077947 FT /rpt_family="LTR10B" FT repeat_region complement(20077949..20078273) FT /rpt_family="L1P3/4" FT repeat_region complement(20078285..20080437) FT /rpt_family="L1" FT repeat_region complement(20080240..20080814) FT /rpt_family="L1M1/2" FT repeat_region 20080816..20081116 FT /rpt_family="AluY" FT repeat_region complement(20081125..20081635) FT /rpt_family="L1M1/2" FT repeat_region complement(20081640..20081940) FT /rpt_family="AluSp" FT repeat_region complement(20081943..20083095) FT /rpt_family="L1M1/2" FT repeat_region complement(20083165..20083209) FT /rpt_family="POLY_A" FT repeat_region complement(20083210..20083489) FT /rpt_family="AluSp" FT repeat_region complement(20083533..20083581) FT /rpt_family="(TAAA)n" FT repeat_region complement(20083846..20083925) FT /rpt_family="L1" FT repeat_region complement(20083926..20084216) FT /rpt_family="AluJb" FT repeat_region complement(20084217..20084604) FT /rpt_family="L1" FT repeat_region 20084855..20085153 FT /rpt_family="AluSg" FT repeat_region complement(20085612..20085660) FT /rpt_family="AT_rich" FT repeat_region 20085696..20085781 FT /rpt_family="(TA)n" FT misc_feature 20085803..20085944 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 82.000" FT repeat_region complement(20085982..20086280) FT /rpt_family="AluSg" FT repeat_region 20086348..20086634 FT /rpt_family="MSTA" FT repeat_region complement(20086635..20086798) FT /rpt_family="LTR14" FT repeat_region 20086977..20087101 FT /rpt_family="MSTA" FT repeat_region complement(20087575..20087598) FT /rpt_family="AT_rich" FT repeat_region complement(20087891..20088180) FT /rpt_family="L1MB8" FT repeat_region complement(20088181..20088481) FT /rpt_family="AluSg" FT repeat_region complement(20088483..20089000) FT /rpt_family="L1ME1" FT repeat_region complement(20089049..20089378) FT /rpt_family="LTR10A" FT repeat_region 20089800..20090101 FT /rpt_family="AluSq" FT misc_feature complement(20090135..20090301) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 83.000" FT repeat_region 20090309..20090353 FT /rpt_family="(CAAA)n" FT repeat_region 20090607..20090675 FT /rpt_family="(CA)n" FT repeat_region complement(20090882..20090903) FT /rpt_family="AT_rich" FT repeat_region complement(20090971..20091088) FT /rpt_family="MIR" FT repeat_region 20091157..20091434 FT /rpt_family="AluSg" FT repeat_region 20091836..20092670 FT /rpt_family="L1PA15" FT repeat_region 20092679..20092990 FT /rpt_family="AluSg" FT repeat_region 20092994..20093721 FT /rpt_family="L1PA15" FT repeat_region 20093723..20094027 FT /rpt_family="AluSq" FT repeat_region 20094028..20094156 FT /rpt_family="L1PA16" FT repeat_region 20094575..20094824 FT /rpt_family="AluSx" FT repeat_region 20095097..20095396 FT /rpt_family="AluSp" FT repeat_region 20095397..20097664 FT /rpt_family="L1M1/2" FT repeat_region 20097604..20097942 FT /rpt_family="L1PA2" FT repeat_region 20097948..20097984 FT /rpt_family="(TAAA)n" FT repeat_region 20097985..20098839 FT /rpt_family="L1" FT repeat_region 20098840..20099165 FT /rpt_family="L1P5" FT repeat_region complement(20099177..20099456) FT /rpt_family="LTR10B" FT repeat_region 20099808..20100564 FT /rpt_family="L1P5" FT repeat_region 20100565..20100866 FT /rpt_family="AluSx" FT repeat_region 20100867..20101383 FT /rpt_family="L1P3/4" FT misc_feature complement(20103235..20103380) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 74.000" FT repeat_region 20103895..20104190 FT /rpt_family="AluSc" FT repeat_region complement(20105155..20105361) FT /rpt_family="HERVL" FT repeat_region 20107058..20107635 FT /rpt_family="L1PB3" FT repeat_region complement(20109275..20109498) FT /rpt_family="MLT1F" FT repeat_region 20109746..20110059 FT /rpt_family="MLT1A1" FT repeat_region complement(20110345..20110642) FT /rpt_family="AluSx" FT repeat_region complement(20110655..20110743) FT /rpt_family="MIR" FT misc_feature 20111419..20111574 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 59.000" FT misc_feature 20111633..20111740 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region complement(20112393..20112652) FT /rpt_family="MLT1B" FT repeat_region complement(20112393..20112712) FT /rpt_family="MLT1B" FT repeat_region complement(20112894..20113165) FT /rpt_family="AluSg" FT repeat_region complement(20113275..20113364) FT /rpt_family="LINE2" FT repeat_region 20113718..20114019 FT /rpt_family="AluY" FT repeat_region 20114232..20114532 FT /rpt_family="AluY" FT misc_feature complement(20115229..20115556) FT /note="DDS similarity to AA603590 np27b02.s1 NCI_CGAP_Pr22 FT Homo sapiens cDNA clone IMAGE:1117515 similar to gb:M61866 FT ZINC FINGER PROTEIN 85 (HUMAN); (328..1); 100% identity." FT CDS complement(join(20115546..20115556,20133813..20133908, FT 20135059..20135185,20150152..20150154)) FT /codon_start=1 FT /product="BC39498_3" FT /note="Hypothetical fingerless ZNF gene; Hypothetical FT protein 70% identical to the amino terminus of (AF054180) FT hematopoietic cell derived zinc finger protein [Homo FT sapiens] and 69% identical to the amino terminus of ZNF141 FT (Q15928)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD14471.1" FT /translation="MELLTFRDVTIEFSLEEWEFLNPAQQSLYRKVMLENYRNLVSLGL FT TVSKPELISRLEQRQEPWNVKRHETIAKPPVSV" FT repeat_region complement(20115828..20115855) FT /rpt_family="AT_rich" FT repeat_region complement(20115890..20116171) FT /rpt_family="AluY" FT CDS complement(join(20116814..20118084,20166739..20166771, FT 20167277..20167310)) FT /codon_start=1 FT /product="BC39498_2" FT /note="Hypothetical ZNF-like protein; Hypothetical protein FT 60% identical to ZN85_HUMAN ZINC FINGER PROTEIN 85 (ZINC FT FINGER PROTEIN HPF4) (HTF1) and 60% identical to ZN91_HUMAN FT ZINC FINGER PROTEIN 91 (ZINC FINGER PROTEIN HTF10) (HPF7)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD14470.1" FT /translation="MLENYRNLIFLGIVVSKQDLITSMSSHYTEDLLPEQCMQDSFQKV FT ILRRYGSCGLEDLHLRKDGENVGECKDQKEIYNGLNQCLSTLPSKIFPYNKCVKVFSKS FT SNLNRENIRHTTEKLFKCMQCGKVFKSHSGLSYHKIIHTEEKLCICEECGKTFKWFSYL FT TKHKRIHTGEKPYKCEECGKAFNWCSSLTKHKRIHTGEKPYKCEECGKAFHWCSPFVRH FT KKIHTGEKPYTCEDCGRAFNRHSHLTKHKTIHTGKKPYKCKECGKAFNHCSLLTIHERT FT HTGEKPYKCEECGKAFNSSSILTEHKVIHSGEKPYKCEKCDKVFKRFSYLTKHKRIHTG FT EKPYKCEECGKAFNWSSILTEHKRIHTGEKPYNCEECGKAFNRCSHLTRHKKIHTAVKR FT YKCEECGKAFKRCSHLNEHKRVQRGEKSCKYKKCGEAFNHCSNLTT" FT CDS complement(join(20116814..20118084,20133813..20133908, FT 20135059..20135185,20150152..20150154)) FT /codon_start=1 FT /product="BC39498_1" FT /note="Hypothetical ZNF-like protein; Hypothetical protein FT 62% identical to ZN85_HUMAN ZINC FINGER PROTEIN 85 (ZINC FT FINGER PROTEIN HPF4) (HTF1) and 62% identical to ZN91_HUMAN FT ZINC FINGER PROTEIN 91 (ZINC FINGER PROTEIN HTF10) (HPF7)" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="AAD14472.1" FT /translation="MELLTFRDVTIEFSLEEWEFLNPAQQSLYRKVMLENYRNLVSLGL FT TVSKPELISRLEQRQEPWNVKRHETIAKPPAMSSHYTEDLLPEQCMQDSFQKVILRRYG FT SCGLEDLHLRKDGENVGECKDQKEIYNGLNQCLSTLPSKIFPYNKCVKVFSKSSNLNRE FT NIRHTTEKLFKCMQCGKVFKSHSGLSYHKIIHTEEKLCICEECGKTFKWFSYLTKHKRI FT HTGEKPYKCEECGKAFNWCSSLTKHKRIHTGEKPYKCEECGKAFHWCSPFVRHKKIHTG FT EKPYTCEDCGRAFNRHSHLTKHKTIHTGKKPYKCKECGKAFNHCSLLTIHERTHTGEKP FT YKCEECGKAFNSSSILTEHKVIHSGEKPYKCEKCDKVFKRFSYLTKHKRIHTGEKPYKC FT EECGKAFNWSSILTEHKRIHTGEKPYNCEECGKAFNRCSHLTRHKKIHTAVKRYKCEEC FT GKAFKRCSHLNEHKRVQRGEKSCKYKKCGEAFNHCSNLTT" FT repeat_region 20118179..20118445 FT /rpt_family="L1P4" FT repeat_region 20118537..20118776 FT /rpt_family="L1P4" FT repeat_region 20118844..20118942 FT /rpt_family="L1P4" FT repeat_region 20119727..20119977 FT /rpt_family="L1P4" FT repeat_region 20119980..20120545 FT /rpt_family="L1P5" FT repeat_region 20120548..20120848 FT /rpt_family="AluSx" FT repeat_region 20120855..20121185 FT /rpt_family="L1" FT repeat_region 20121187..20121483 FT /rpt_family="AluSx" FT repeat_region 20121500..20121786 FT /rpt_family="AluSc" FT repeat_region 20121803..20122556 FT /rpt_family="L1" FT repeat_region 20122565..20122860 FT /rpt_family="AluSg" FT repeat_region 20122866..20123194 FT /rpt_family="L1" FT repeat_region 20123192..20123292 FT /rpt_family="L1" FT repeat_region 20123296..20123595 FT /rpt_family="AluY" FT repeat_region 20123603..20123701 FT /rpt_family="L1M" FT repeat_region 20123759..20124387 FT /rpt_family="L1" FT repeat_region complement(20124389..20124688) FT /rpt_family="AluSp" FT repeat_region 20124690..20124803 FT /rpt_family="L1" FT repeat_region 20124758..20125122 FT /rpt_family="L1" FT repeat_region 20125135..20125288 FT /rpt_family="L1MB2" FT repeat_region 20125299..20125603 FT /rpt_family="AluSc" FT repeat_region 20125608..20125940 FT /rpt_family="L1MB2" FT repeat_region 20126262..20126299 FT /rpt_family="AT_rich" FT repeat_region 20126839..20127027 FT /rpt_family="AluJb" FT repeat_region complement(20127043..20127066) FT /rpt_family="AT_rich" FT repeat_region complement(20127297..20127339) FT /rpt_family="AT_rich" FT repeat_region 20127496..20127610 FT /rpt_family="L1M3/4" FT repeat_region 20127844..20128729 FT /rpt_family="L1M3/4" FT repeat_region 20128736..20128846 FT /rpt_family="L1M4" FT repeat_region complement(20128901..20129202) FT /rpt_family="AluYa5" FT repeat_region 20129232..20130192 FT /rpt_family="L1M4" FT repeat_region 20130188..20130623 FT /rpt_family="L1MA9" FT repeat_region 20130626..20130722 FT /rpt_family="L1PB3" FT repeat_region 20130739..20130871 FT /rpt_family="FLAM_C" FT repeat_region 20130898..20131024 FT /rpt_family="L1MA9" FT repeat_region 20131025..20131318 FT /rpt_family="AluSg" FT repeat_region 20131330..20131831 FT /rpt_family="L1MA9" FT repeat_region 20131832..20132035 FT /rpt_family="MER30" FT repeat_region 20132104..20132311 FT /rpt_family="AluSx" FT repeat_region 20132327..20132447 FT /rpt_family="L1MA9" FT repeat_region 20132698..20132992 FT /rpt_family="AluSx" FT repeat_region 20133126..20133174 FT /rpt_family="(CAAAA)n" FT repeat_region 20133195..20133490 FT /rpt_family="AluSp" FT repeat_region complement(20133558..20133608) FT /rpt_family="LINE2" FT misc_feature complement(20133813..20133908) FT /note="DDS similarity to overlapping ESTs:~(51855..51760) FT AA603590 np27b02.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1117515 similar to gb:M61866 ZINC FINGER PROTEIN 85 FT (HUMAN); (424..329); 95% identity.~~(51855..51821) N87781 FT K0082F Fetal heart, Lambda ZAP Express Homo sapiens cDNA FT clone K0082 5' similar to ZINC FINGER KRUPPEL RELATED; FT (288..321); 85% identity." FT repeat_region 20134026..20134325 FT /rpt_family="AluSc" FT repeat_region 20134509..20134809 FT /rpt_family="AluSx" FT misc_feature complement(20135059..20135185) FT /note="DDS similarity to overlapping ESTs:~(53132..53006) FT N87781 K0082F Fetal heart, Lambda ZAP Express Homo sapiens FT cDNA clone K0082 5' similar to ZINC FINGER KRUPPEL RELATED; FT (165..287); 95% identity.~~(53132..53041) N84282 KK7017F FT Homo sapiens cDNA clone KK7017 5' similar to ZINC FINGER FT KRUPPEL RELATED; (165..256); 98% identity.~~(53055..53006) FT AA603590 np27b02.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone FT IMAGE:1117515 similar to gb:M61866 ZINC FINGER PROTEIN 85 FT (HUMAN); (474..425); 98% identity." FT repeat_region 20135365..20135632 FT /rpt_family="AluSx" FT repeat_region complement(20135856..20135926) FT /rpt_family="MER5A" FT repeat_region 20136078..20136198 FT /rpt_family="L1MC4" FT repeat_region 20136205..20136505 FT /rpt_family="AluY" FT repeat_region 20136830..20137121 FT /rpt_family="AluY" FT repeat_region complement(20137275..20137574) FT /rpt_family="AluSx" FT repeat_region 20138287..20138587 FT /rpt_family="AluSp" FT repeat_region 20138613..20138740 FT /rpt_family="AluSg/x" FT repeat_region complement(20139024..20139320) FT /rpt_family="AluSx" FT repeat_region complement(20139686..20139727) FT /rpt_family="MIR" FT repeat_region complement(20139789..20140089) FT /rpt_family="AluSx" FT repeat_region 20140128..20140425 FT /rpt_family="AluSx" FT repeat_region 20140624..20140647 FT /rpt_family="AT_rich" FT repeat_region 20141097..20141400 FT /rpt_family="AluSx" FT repeat_region 20142470..20142667 FT /rpt_family="AluY" FT repeat_region complement(20143433..20143789) FT /rpt_family="MER67C" FT repeat_region 20143794..20144099 FT /rpt_family="AluSx" FT misc_feature 20144267..20144353 FT /note="BLASTX similarity to (6..34); match: 0.62, score: FT 3.9e-07; database searched: nr; E1B 19K/Bcl-2-interacting FT protein Nip3 - human gi|558846 (U15174) BCL2/adenovirus E1B FT 19kD-interacting protein 3 [Homo sapiens]" FT repeat_region complement(20144367..20144662) FT /rpt_family="AluSx" FT misc_feature 20144685..20145141 FT /note="BLASTX similarity to (40..194); match: 0.75, score: FT 2.3e-63; database searched: nr; E1B 19K/Bcl-2-interacting FT protein Nip3 - human gi|558846 (U15174) BCL2/adenovirus E1B FT 19kD-interacting protein 3 [Homo sapiens]" FT repeat_region 20145306..20145603 FT /rpt_family="AluSp" FT repeat_region 20145624..20145909 FT /rpt_family="AluSx" FT repeat_region complement(20146037..20146332) FT /rpt_family="AluSq" FT repeat_region complement(20146546..20146844) FT /rpt_family="AluSx" FT repeat_region complement(20147138..20147179) FT /rpt_family="AluSp/q" FT repeat_region 20147180..20147435 FT /rpt_family="AluSq" FT repeat_region complement(20147436..20147493) FT /rpt_family="MER67C" FT repeat_region 20147494..20147800 FT /rpt_family="AluJo" FT repeat_region complement(20147816..20147925) FT /rpt_family="MER67C" FT misc_feature complement(20150152..20150315) FT /note="DDS similarity to overlapping ESTs:~N84282 KK7017F FT Homo sapiens cDNA clone KK7017 5' similar to ZINC FINGER FT KRUPPEL RELATED; (1..164); 99% identity.~~N87781 K0082F FT Fetal heart, Lambda ZAP Express Homo sapiens cDNA clone FT K0082 5' similar to ZINC FINGER KRUPPEL RELATED; (1..164); FT 100% identity." FT repeat_region complement(20150722..20150785) FT /rpt_family="MER33" FT repeat_region 20150786..20151082 FT /rpt_family="AluJo" FT repeat_region 20151307..20151555 FT /rpt_family="AluSx" FT repeat_region 20151635..20151748 FT /rpt_family="MER5B" FT repeat_region complement(20151778..20152076) FT /rpt_family="AluSq" FT repeat_region 20152367..20152676 FT /rpt_family="AluSg" FT repeat_region complement(20152833..20153118) FT /rpt_family="AluSx" FT repeat_region complement(20153211..20153303) FT /rpt_family="L1ME3A" FT repeat_region complement(20153544..20153584) FT /rpt_family="AT_rich" FT repeat_region 20154042..20154337 FT /rpt_family="AluSg" FT repeat_region 20154517..20154584 FT /rpt_family="AT_rich" FT misc_feature complement(20155446..20155823) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 61.000" FT repeat_region 20156427..20156923 FT /rpt_family="LTR10C" FT repeat_region complement(20157426..20157456) FT /rpt_family="AT_rich" FT repeat_region complement(20157535..20157656) FT /rpt_family="(TAAAA)n" FT repeat_region 20157723..20158024 FT /rpt_family="AluY" FT repeat_region 20158028..20158049 FT /rpt_family="AT_rich" FT repeat_region complement(20158217..20158514) FT /rpt_family="AluSx" FT repeat_region 20159430..20159729 FT /rpt_family="AluSq" FT repeat_region complement(20159917..20160247) FT /rpt_family="MLT1A1" FT repeat_region complement(20161317..20161688) FT /rpt_family="THE1B" FT repeat_region 20164030..20164330 FT /rpt_family="AluSp" FT repeat_region 20164371..20164457 FT /rpt_family="(TAAAA)n" FT repeat_region 20164458..20164755 FT /rpt_family="AluSc" FT repeat_region 20164761..20164890 FT /rpt_family="(TAAAA)n" FT repeat_region 20164891..20165147 FT /rpt_family="AluJb" FT repeat_region 20165151..20165448 FT /rpt_family="AluSg" FT repeat_region 20165561..20165860 FT /rpt_family="AluSx" FT repeat_region complement(20166128..20166429) FT /rpt_family="AluSg" FT repeat_region 20166447..20166479 FT /rpt_family="AT_rich" FT repeat_region 20167409..20167445 FT /rpt_family="(CA)n" FT repeat_region complement(20167704..20167944) FT /rpt_family="AluSg" FT repeat_region complement(20167945..20168421) FT /rpt_family="MER9" FT repeat_region complement(20168444..20168507) FT /rpt_family="AluSg" FT repeat_region complement(20168687..20168709) FT /rpt_family="AT_rich" FT repeat_region complement(20168716..20168906) FT /rpt_family="AluSg" FT repeat_region 20168977..20169272 FT /rpt_family="AluSg" FT repeat_region 20170417..20170869 FT /rpt_family="LTR7" FT repeat_region complement(20171457..20171756) FT /rpt_family="MER67C" FT repeat_region 20171815..20172110 FT /rpt_family="AluSx" FT repeat_region complement(20172117..20172196) FT /rpt_family="(TA)n" FT repeat_region 20172942..20172997 FT /rpt_family="Alu" FT repeat_region complement(20173004..20173407) FT /rpt_family="MER67C" FT misc_feature 20173566..20174106 FT /note="BLASTX similarity to (3..183); match: 0.71, score: FT 2.8e-63; database searched: nr; E1B 19K/Bcl-2-interacting FT protein Nip3 - human gi|558846 (U15174) BCL2/adenovirus E1B FT 19kD-interacting protein 3 [Homo sapiens]" FT repeat_region complement(20174181..20174215) FT /rpt_family="AT_rich" FT repeat_region complement(20174249..20174344) FT /rpt_family="POLY_A" FT repeat_region 20174345..20174693 FT /rpt_family="SVA" FT repeat_region 20174994..20176102 FT /rpt_family="SVA" FT repeat_region 20176180..20176275 FT /rpt_family="AluSq/x" FT repeat_region 20176297..20176512 FT /rpt_family="AluSx" FT repeat_region complement(20176516..20176597) FT /rpt_family="LTR8" FT repeat_region complement(20176729..20177026) FT /rpt_family="AluYa5" FT misc_feature 20178260..20178349 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 51.000" FT misc_feature 20178662..20178760 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 87.000" FT repeat_region complement(20179615..20180016) FT /rpt_family="LTR7" FT repeat_region 20180354..20180441 FT /rpt_family="L1" FT repeat_region 20180442..20180750 FT /rpt_family="AluYb8" FT repeat_region 20180751..20181672 FT /rpt_family="L1" FT repeat_region 20181663..20182161 FT /rpt_family="L1P3/4" FT repeat_region 20182162..20182463 FT /rpt_family="AluSx" FT repeat_region 20182471..20182742 FT /rpt_family="L1P3/4" FT repeat_region 20182743..20183045 FT /rpt_family="AluY" FT repeat_region 20183046..20183303 FT /rpt_family="L1P3/4" FT repeat_region complement(20183390..20183674) FT /rpt_family="AluY" FT repeat_region 20183724..20183826 FT /rpt_family="(CATA)n" FT misc_feature complement(20185092..20185382) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 66.000" FT repeat_region 20185907..20186175 FT /rpt_family="AluSc" FT repeat_region 20186178..20186231 FT /rpt_family="AluSc" FT repeat_region complement(20186501..20186760) FT /rpt_family="AluSg" FT repeat_region complement(20187449..20187749) FT /rpt_family="AluY" FT repeat_region 20187921..20188000 FT /rpt_family="LTR8" FT repeat_region complement(20188003..20188225) FT /rpt_family="AluSx" FT repeat_region 20188283..20188358 FT /rpt_family="(TAAAA)n" FT repeat_region 20188405..20188569 FT /rpt_family="MER57_internal" FT misc_feature complement(20188723..20188892) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 80.000" FT repeat_region 20189335..20189413 FT /rpt_family="AluS" FT misc_feature 20189415..20189603 FT /note="BLASTN similarity to Z63242 (94..284); match: 0.98, FT score: 3.6e-72; database searched: nt; H.sapiens CpG DNA, FT clone 7g11, forward read cpg7g11.ft1d ." FT repeat_region 20189556..20189649 FT /rpt_family="LTR10A" FT repeat_region 20189650..20189944 FT /rpt_family="AluSg" FT repeat_region 20190595..20190627 FT /rpt_family="Alu" FT repeat_region 20190596..20190636 FT /rpt_family="Alu" FT misc_feature complement(20190668..20190718) FT /note="BLASTX similarity to P09058 (156..172); match: 0.76, FT score: 3.7e-07; database searched: nr; 40S RIBOSOMAL FT PROTEIN S8 pir||R3RT8 ribosomal protein S8 - rat FT >pir||S25022 ribosomal protein S8 - human >pir||S42110" FT repeat_region complement(20190745..20190955) FT /rpt_family="AluSp" FT misc_feature complement(20190984..20191348) FT /note="BLASTX similarity to P09058 (63..122); match: 0.81, FT score: 9.6e-66; database searched: nr; 40S RIBOSOMAL FT PROTEIN S8 pir||R3RT8 ribosomal protein S8 - rat FT >pir||S25022 ribosomal protein S8 - human >pir||S42110" FT misc_feature complement(20191198..20191348) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 62.000" FT repeat_region complement(20191388..20191642) FT /rpt_family="MER21B" FT repeat_region complement(20191999..20192295) FT /rpt_family="AluSg" FT repeat_region complement(20192572..20192872) FT /rpt_family="AluY" FT repeat_region complement(20192885..20193150) FT /rpt_family="L1PA15" FT repeat_region 20193151..20194112 FT /rpt_family="LTR5" FT misc_feature 20260365..20260675 FT /note="NOTE: Transposon sequencing failed to verify number FT of repeat copies 69810-70120. Unsure number of repeat FT copies 69810-70120. 69810-70120 unstable in parent BAC FT clone and plasmid subclones." FT repeat_region complement(20359245..20359546) FT /rpt_family="LTR5" FT repeat_region complement(20360547..20360835) FT /rpt_family="Alu" FT repeat_region 20361405..20361685 FT /rpt_family="Alu" FT repeat_region complement(20361878..20362074) FT /rpt_family="L1" FT repeat_region 20362311..20362597 FT /rpt_family="Alu" FT repeat_region 20362838..20363086 FT /rpt_family="Alu" FT repeat_region complement(20364183..20364472) FT /rpt_family="Alu" FT repeat_region complement(20365081..20365223) FT /rpt_family="Alu" FT repeat_region complement(20365633..20365934) FT /rpt_family="Alu" FT repeat_region 20366016..20366258 FT /rpt_family="Alu" FT repeat_region complement(20366533..20366698) FT /rpt_family="L1" FT repeat_region complement(20367089..20367300) FT /rpt_family="Alu" FT repeat_region complement(20367433..20367689) FT /rpt_family="Alu" FT repeat_region complement(20368027..20368310) FT /rpt_family="Alu" FT misc_feature join(20368463..20368652,20369163..20371054, FT 20371355..20371613,20371854..20372185) FT /note="Similarity to ACTR2 mRNA (AF006082)" FT repeat_region 20371044..20371359 FT /rpt_family="Alu" FT repeat_region complement(20371622..20371852) FT /rpt_family="Alu" FT repeat_region complement(20372201..20372599) FT /rpt_family="LTR7" FT repeat_region complement(20374158..20374452) FT /rpt_family="Alu" FT repeat_region 20374547..20374679 FT /rpt_family="Alu" FT repeat_region 20374752..20375396 FT /rpt_family="Alu" FT repeat_region complement(20376546..20377158) FT /rpt_family="Alu" FT repeat_region 20379258..20379552 FT /rpt_family="Alu" FT repeat_region 20379872..20380146 FT /rpt_family="Alu" FT repeat_region 20380284..20380561 FT /rpt_family="Alu" FT repeat_region 20381235..20382198 FT /rpt_family="L1" FT repeat_region 20382210..20382493 FT /rpt_family="Alu" FT repeat_region complement(20382704..20382996) FT /rpt_family="Alu" FT repeat_region complement(20383357..20383637) FT /rpt_family="Alu" FT repeat_region 20383737..20383924 FT /rpt_family="Alu" FT repeat_region 20384563..20384613 FT /rpt_family="Alu" FT repeat_region 20384827..20385091 FT /rpt_family="Alu" FT repeat_region 20386392..20386678 FT /rpt_family="Alu" FT repeat_region complement(20386707..20386958) FT /rpt_family="Alu" FT repeat_region 20387400..20388383 FT /rpt_family="LTR5" FT repeat_region 20393447..20393762 FT /rpt_family="Alu" FT repeat_region 20396561..20397513 FT /rpt_family="LTR5" FT repeat_region complement(20397730..20397906) FT /rpt_family="MER21" FT repeat_region complement(20398872..20399150) FT /rpt_family="Alu" FT repeat_region complement(20399173..20399257) FT /rpt_family="L1" FT repeat_region complement(20399308..20399881) FT /rpt_family="Alu" FT repeat_region complement(20399899..20400878) FT /rpt_family="L1" FT repeat_region complement(20400919..20401208) FT /rpt_family="Alu" FT repeat_region complement(20401836..20401998) FT /rpt_family="Alu" FT repeat_region 20402097..20402363 FT /rpt_family="Alu" FT repeat_region 20404582..20404872 FT /rpt_family="Alu" FT repeat_region 20406195..20406462 FT /rpt_family="Alu" FT repeat_region complement(20406660..20406833) FT /rpt_family="Alu" FT repeat_region complement(20406853..20406994) FT /rpt_family="Alu" FT repeat_region 20407592..20407916 FT /rpt_family="LTR5" FT repeat_region 20407922..20408021 FT /rpt_family="LTR5" FT repeat_region complement(20408179..20408466) FT /rpt_family="Alu" FT repeat_region complement(20409213..20409503) FT /rpt_family="L1" FT repeat_region complement(20409941..20410234) FT /rpt_family="Alu" FT repeat_region complement(20410350..20410620) FT /rpt_family="Alu" FT repeat_region complement(20411413..20411540) FT /rpt_family="L1" FT repeat_region complement(20412772..20413065) FT /rpt_family="Alu" FT repeat_region complement(20413106..20413367) FT /rpt_family="Alu" FT repeat_region complement(20414711..20414999) FT /rpt_family="Alu" FT repeat_region 20416348..20416633 FT /rpt_family="Alu" FT repeat_region 20417163..20417430 FT /rpt_family="Alu" FT repeat_region complement(20418128..20418398) FT /rpt_family="Alu" FT repeat_region complement(20419585..20419842) FT /rpt_family="Alu" FT repeat_region 20420252..20420456 FT /rpt_family="LTR10" FT repeat_region complement(20420479..20420778) FT /rpt_family="Alu" FT repeat_region 20421392..20421660 FT /rpt_family="Alu" FT repeat_region complement(20421902..20422099) FT /rpt_family="Alu" FT repeat_region 20422596..20422874 FT /rpt_family="Alu" FT repeat_region complement(20423090..20423371) FT /rpt_family="Alu" FT repeat_region 20423861..20424440 FT /rpt_family="Alu" FT repeat_region 20427050..20427337 FT /rpt_family="Alu" FT repeat_region 20427786..20428001 FT /rpt_family="Alu" FT repeat_region 20428049..20428287 FT /rpt_family="Alu" FT repeat_region complement(20430671..20430855) FT /rpt_family="L1" FT repeat_region complement(20433565..20434356) FT /rpt_family="Alu" FT repeat_region complement(20436926..20437158) FT /rpt_family="Alu" FT repeat_region complement(20439774..20440069) FT /rpt_family="Alu" FT repeat_region 20440254..20440513 FT /rpt_family="Alu" FT repeat_region complement(20441115..20441457) FT /rpt_family="Alu" FT repeat_region 20441892..20442224 FT /rpt_family="Alu" FT repeat_region complement(20442835..20443027) FT /rpt_family="L1" FT repeat_region complement(20443231..20443497) FT /rpt_family="Alu" FT repeat_region complement(20443868..20444153) FT /rpt_family="Alu" FT repeat_region complement(20444994..20445239) FT /rpt_family="Alu" FT repeat_region 20446795..20446993 FT /rpt_family="Alu" FT repeat_region complement(20447240..20447517) FT /rpt_family="Alu" FT repeat_region 20448246..20448573 FT /rpt_family="Alu" FT repeat_region complement(20449022..20449267) FT /rpt_family="Alu" FT repeat_region 20449870..20450429 FT /rpt_family="Alu" FT repeat_region 20451848..20451890 FT /rpt_family="Alu" FT repeat_region complement(20452629..20452768) FT /rpt_family="Alu" FT repeat_region 20452857..20453072 FT /rpt_family="Alu" FT repeat_region complement(20453187..20453426) FT /rpt_family="Alu" FT repeat_region 20453684..20453971 FT /rpt_family="Alu" FT repeat_region 20454546..20454831 FT /rpt_family="Alu" FT repeat_region 20454859..20454931 FT /rpt_family="Alu" FT repeat_region 20455034..20455638 FT /rpt_family="Alu" FT repeat_region 20455885..20456167 FT /rpt_family="Alu" FT repeat_region complement(20456246..20456530) FT /rpt_family="Alu" FT repeat_region 20456621..20457155 FT /rpt_family="Alu" FT repeat_region 20458191..20458399 FT /rpt_family="Alu" FT repeat_region 20459451..20459735 FT /rpt_family="Alu" FT repeat_region 20463354..20463624 FT /rpt_family="Alu" FT repeat_region complement(20463917..20464066) FT /rpt_family="L1" FT repeat_region complement(20464323..20464641) FT /rpt_family="Alu" FT repeat_region 20464739..20465064 FT /rpt_family="Alu" FT repeat_region 20465108..20466082 FT /rpt_family="L1" FT repeat_region 20466098..20466222 FT /rpt_family="Alu" FT repeat_region 20466491..20466775 FT /rpt_family="Alu" FT repeat_region 20466787..20467078 FT /rpt_family="Alu" FT repeat_region 20467666..20468003 FT /rpt_family="Alu" FT repeat_region complement(20468036..20468097) FT /rpt_family="LTR8" FT repeat_region 20468236..20468300 FT /rpt_family="LTR10" FT repeat_region complement(20469642..20469749) FT /rpt_family="L1" FT repeat_region complement(20469654..20469755) FT /rpt_family="MER25" FT repeat_region 20469981..20470351 FT /rpt_family="LTR7" FT repeat_region complement(20470948..20471226) FT /rpt_family="LTR10" FT repeat_region 20472538..20472813 FT /rpt_family="Alu" FT repeat_region 20480182..20480690 FT /rpt_family="LTR6" FT repeat_region 20485467..20485763 FT /rpt_family="Alu" FT repeat_region complement(20486630..20486862) FT /rpt_family="LTR10" FT repeat_region 20487035..20487103 FT /rpt_family="Alu" FT repeat_region 20487113..20487247 FT /rpt_family="LTR7" FT repeat_region 20487377..20487617 FT /rpt_family="Alu" FT repeat_region complement(20488867..20489159) FT /rpt_family="Alu" FT repeat_region complement(20489264..20489559) FT /rpt_family="Alu" FT repeat_region complement(20489883..20490015) FT /rpt_family="Alu" FT repeat_region complement(20490039..20491332) FT /rpt_family="L1" FT repeat_region complement(20490556..20490852) FT /rpt_family="Alu" FT repeat_region complement(20492007..20492160) FT /rpt_family="L1" FT repeat_region complement(20492165..20492447) FT /rpt_family="Alu" FT repeat_region complement(20492600..20492864) FT /rpt_family="Alu" FT repeat_region complement(20494180..20494482) FT /rpt_family="Alu" FT repeat_region complement(20496522..20496804) FT /rpt_family="Alu" FT repeat_region complement(20498178..20498274) FT /rpt_family="Alu" FT repeat_region 20499837..20500059 FT /rpt_family="Alu" FT repeat_region 20500715..20501000 FT /rpt_family="Alu" FT repeat_region complement(20501709..20501994) FT /rpt_family="Alu" FT repeat_region complement(20502651..20502962) FT /rpt_family="Alu" FT repeat_region complement(20503089..20503377) FT /rpt_family="Alu" FT repeat_region complement(20504347..20504425) FT /rpt_family="Alu" FT repeat_region complement(20504453..20504723) FT /rpt_family="Alu" FT STS 20505482..20505602 FT /standard_name="WIAF-3719-STS" FT /note="WIAF-3718-STS" FT repeat_region complement(20505981..20506238) FT /rpt_family="Alu" FT repeat_region 20507439..20507687 FT /rpt_family="Alu" FT repeat_region 20507816..20508083 FT /rpt_family="Alu" FT repeat_region 20510193..20510489 FT /rpt_family="Alu" FT repeat_region 20510512..20510741 FT /rpt_family="Alu" FT repeat_region 20511339..20511602 FT /rpt_family="Alu" FT repeat_region 20511635..20511906 FT /rpt_family="Alu" FT repeat_region complement(20512971..20513256) FT /rpt_family="Alu" FT repeat_region 20513274..20513347 FT /rpt_family="Alu" FT repeat_region 20513837..20514327 FT /rpt_family="Alu" FT repeat_region 20515355..20515627 FT /rpt_family="Alu" FT repeat_region 20515984..20516527 FT /rpt_family="L1" FT repeat_region 20516682..20516937 FT /rpt_family="Alu" FT repeat_region 20517056..20517331 FT /rpt_family="Alu" FT repeat_region 20517384..20517490 FT /rpt_family="L1" FT repeat_region complement(20520067..20520271) FT /rpt_family="Alu" FT repeat_region complement(20521123..20521419) FT /rpt_family="Alu" FT repeat_region 20521732..20522027 FT /rpt_family="Alu" FT gap 20523416..20573415 FT /estimated_length=50000 FT repeat_region 21441459..21441676 FT /rpt_family="HERV17" FT repeat_region 21441710..21442700 FT /rpt_family="SVA" FT repeat_region 21442702..21442968 FT /rpt_family="SVA" FT repeat_region 21443010..21443275 FT /rpt_family="SVA" FT repeat_region 21443319..21443773 FT /rpt_family="SVA" FT repeat_region 21443775..21444630 FT /rpt_family="SVA" FT repeat_region 21444667..21444802 FT /rpt_family="(GAAA)n" FT repeat_region 21444786..21444836 FT /rpt_family="(CAGG)n" FT repeat_region 21444853..21446591 FT /rpt_family="HSRIRT" FT repeat_region 21446592..21447085 FT /rpt_family="LTR15" FT repeat_region 21447086..21447137 FT /rpt_family="L1PA15" FT repeat_region complement(21447155..21447560) FT /rpt_family="SVA" FT repeat_region complement(21447563..21448028) FT /rpt_family="SVA" FT repeat_region complement(21448033..21448184) FT /rpt_family="SVA" FT repeat_region 21448311..21448416 FT /rpt_family="L1PA15" FT repeat_region 21448426..21448510 FT /rpt_family="AluS" FT repeat_region 21448511..21448808 FT /rpt_family="AluSc" FT repeat_region 21448821..21449042 FT /rpt_family="AluJb" FT repeat_region 21449112..21449412 FT /rpt_family="AluSx" FT repeat_region 21449414..21449745 FT /rpt_family="L1PA15" FT repeat_region 21450343..21450639 FT /rpt_family="MER21B" FT repeat_region 21450839..21451288 FT /rpt_family="MER41A" FT repeat_region 21451653..21451953 FT /rpt_family="AluSc" FT misc_feature 21452470..21452520 FT /note="predicted exon, program: grail1aexons_human_1.3, FT frame: 1, quality: good, score: 42.000" FT misc_feature 21452662..21452750 FT /note="predicted exon, program: grail1aexons_human_1.3, FT frame: 1, quality: good, score: 40.000" FT repeat_region 21453067..21453364 FT /rpt_family="AluSq" FT repeat_region complement(21453365..21453515) FT /rpt_family="MER57_internal" FT repeat_region complement(21453620..21454081) FT /rpt_family="L1" FT repeat_region complement(21454082..21455857) FT /rpt_family="L1M1/2" FT misc_feature 21727616..21831091 FT /note="Draft Sequence Produced by DOE Joint Genome FT Institute; www.jgi.doe.gov; Finishing Completed at Stanford FT Human Genome Center; www-shgc.stanford.edu; Quality: Phrap FT Quality >=40 99.9% of Sequence; Estimated Total Number of FT Errors is 0.1.; NOTE: This insert is not the entire FT sequence of the clone (entire sequence is 215kb). It is FT clipped at the overlaps with AC010615 and AC010617. The FT number of bases overlapped with AC010615 is 15547 and with FT AC010617 is 9721." FT repeat_region 22235886..22236186 FT /rpt_family="Alu" FT repeat_region complement(22234830..22235000) FT /rpt_family="Alu" FT repeat_region complement(22234408..22234700) FT /rpt_family="Alu" FT repeat_region 22234203..22234391 FT /rpt_family="MER33" FT repeat_region 22233894..22234177 FT /rpt_family="Alu" FT repeat_region 22233254..22233432 FT /rpt_family="Alu" FT misc_feature complement(22232744..22232850) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 59.000" FT misc_feature 22231436..22231497 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 70.000" FT misc_feature 22231306..22231366 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 69.000" FT repeat_region 22229259..22229543 FT /rpt_family="Alu" FT repeat_region 22227822..22228124 FT /rpt_family="Alu" FT repeat_region 22222248..22222516 FT /rpt_family="Alu" FT repeat_region 22221664..22221928 FT /rpt_family="Alu" FT repeat_region complement(22220864..22221148) FT /rpt_family="Alu" FT repeat_region 22219863..22220134 FT /rpt_family="Alu" FT misc_feature 22219233..22219324 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 64.000" FT misc_feature complement(22216905..22217228) FT /note="DDS similarity to AA435922 zt87e09.s1 Soares testis FT NHT Homo sapiens cDNA clone 729352 3' (324..6); 99% FT identity." FT repeat_region complement(22216610..22216900) FT /rpt_family="Alu" FT repeat_region 22215379..22215437 FT /rpt_family="BSR" FT misc_feature complement(22214111..22214319) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: marginal, score: 49.000" FT misc_feature complement(22212832..22213100) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 52.000" FT repeat_region 22212442..22212719 FT /rpt_family="Alu" FT repeat_region 22212308..22212366 FT /rpt_family="BSR" FT misc_feature complement(22210977..22211138) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 97.000" FT misc_feature complement(22208744..22208831) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 71.000" FT repeat_region complement(22207976..22208494) FT /rpt_family="MLT2B2" FT repeat_region complement(22207495..22207701) FT /rpt_family="Alu" FT repeat_region complement(22204551..22207366) FT /rpt_family="HERVL" FT /note="Match in HERVL from bases 388..3236.~BLASTX FT similarity to PID (1..484); match: 0.65, score: 1.7e-154; FT database searched: nr; (Y12713) Pro-Pol-dUTPase polyprotein FT [Murine endogenous retrovirus]" FT repeat_region 22204245..22204524 FT /rpt_family="Alu" FT repeat_region complement(22203315..22204221) FT /rpt_family="HERVL" FT /note="Match in HERVL from bases 3222..4135.~BLASTX FT similarity to PID (485..786); match: 0.6, score: 4.1e-103; FT database searched: nr; (Y12713) Pro-Pol-dUTPase polyprotein FT [Murine endogenous retrovirus]" FT repeat_region complement(22202767..22202886) FT /rpt_family="Alu" FT repeat_region 22202389..22202723 FT /rpt_family="L1" FT repeat_region complement(22201763..22202034) FT /rpt_family="Alu" FT repeat_region complement(22200781..22201058) FT /rpt_family="Alu" FT repeat_region 22199129..22200685 FT /rpt_family="L1" FT misc_feature 22200220..22200522 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 63.000" FT repeat_region complement(22198623..22198917) FT /rpt_family="Alu" FT repeat_region complement(22198131..22198630) FT /rpt_family="L1" FT repeat_region complement(22197834..22198120) FT /rpt_family="Alu" FT repeat_region complement(22197361..22197672) FT /rpt_family="Alu" FT repeat_region complement(22196012..22197210) FT /rpt_family="L1" FT repeat_region complement(22196323..22196619) FT /rpt_family="Alu" FT repeat_region complement(22195697..22195983) FT /rpt_family="Alu" FT repeat_region complement(22195225..22195464) FT /rpt_family="Alu" FT repeat_region 22194853..22194922 FT /rpt_family="Alu" FT repeat_region complement(22194615..22194772) FT /rpt_family="Alu" FT repeat_region 22194127..22194428 FT /rpt_family="Alu" FT misc_feature 22194138..22194227 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 84.000" FT misc_feature complement(22193594..22193712) FT /note="DDS similarity to AA135651 zl10a07.r1 Soares FT pregnant uterus NbHPU Homo sapiens cDNA clone 501492 5' FT similar to gb:L11672 ZINC FINGER PROTEIN 91 FT (HUMAN);(1..119); 100% identity." FT CDS complement(join(22153485..22153540,22154004..22154887, FT 22154972..22156146,22156447..22157609,22170018..22170113, FT 22171585..22171711,22193594..22193596)) FT /codon_start=1 FT /product="ZNF91L" FT /note="hypothetical zinc finger transcription factor; FT non-consensus splice at position 82362" FT /protein_id="AAB94784.1" FT /translation="MGSLTFRDVAIEFSLEEWQCLDTAQQNLYRNVMLENYRNLVFLGI FT AAFKPDLIIFLEEGKESWNMKRHEMVEESPVICSHFAQDLWPEQGIEDSFQKVILRRYE FT KCGHENLHLKIGYTNVDECKVHKEGYNKLNQSLTTTQSKVFQRGKYANVFHKCSNSNRH FT KIRHTGKKHLQCKEYVRSFCMLSHLSQHKRIYTRENSYKCEEGGKAFNWSSTLTYYKSA FT HTGEKPYRCKECGKAFSKFSILTKHKVIHTGEKSYKCEECGKAFNQSAILTKHKIIHTG FT EKPNKCEECGKAFSKVSTLTTHKAIHAGEKPYKCKECGKAFSKVSTLITHKAIHAGEKP FT YKCKECGKAFSKFSILTKHKVIHTGEKPYKCEECGKAYKWPSTLSYHKKIHTGEKPYKC FT EECGKGFSMFSILTKHEVIHTGEKPYKCEECGKAFNWSSNLMEHKKIHTGETPYKCEEC FT GKGFSWSSTLSYHKKIHTVEKPYKCEECGKAFNQSAILIKHKRIHTGEKPYKCEECGKT FT FSKVSTLTTHKAIHAGEKPYKCKECGKTFIKVSTLTTHKAIHAGEKPYKCKECGKAFSK FT FSILTKHKVIHTGEKPYKCEECGKAFNWSSNLMEHKRIHTGEKPYKCEECGKSFSTFSV FT LTKHKVIHTGEKPYKCEECGKAYKWSSTLSYHKKIHTVEKPYKCEECGKAFNRSAILIK FT HKRIHTDEKPYKCEECGKTFSKVSTLTTHKAIHAGEKPYKCKECGKAFSKFSILTKHKV FT IHTGEKPYKCEECGKAYKWPSTLSYHKKIHTGEKPYKCEECGKGFSMFSILTKHEVIHT FT GEKPYKCEECGKAFSWLSVFSKHKKTHAGEKFYKCEACGKAYNTFSILTKHKVIHTGEK FT PYKCEECGKAFNWSSNLMEHKKIHTGETPYKCEECDKAFSWPSSLTEHKATHAGEKPYK FT CEECGKAFSWPSRLTEHKATHAGEEPYKCEECGKAFNWSSNLMEHKRIHTGEKPYKCEE FT CGKSFSTFSILTKHKVIHTGEKPYKCEECGKAYKWSSTLSYHKKIHTVEKPYKCEECGK FT GFVMFSILAKHKVIHTGEKLYKCEECGKAYKWPSTLRYHKKIHTGEKPYKCEECGKAFS FT TFSILTKHKVIHTGEKPYKCEECGKAFSWLSVFSKHKKIHTGVPNPPTHKKIHAGEKLY FT K" FT repeat_region 22192706..22192992 FT /rpt_family="Alu" FT repeat_region 22192279..22192566 FT /rpt_family="Alu" FT repeat_region 22190521..22191123 FT /rpt_family="Alu" FT repeat_region 22190040..22190324 FT /rpt_family="Alu" FT misc_feature 22188879..22188986 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 71.000" FT repeat_region 22187347..22187722 FT /rpt_family="L1" FT repeat_region 22187047..22187317 FT /rpt_family="Alu" FT repeat_region 22186713..22186996 FT /rpt_family="Alu" FT repeat_region 22182885..22186709 FT /rpt_family="L1" FT repeat_region 22184420..22184712 FT /rpt_family="Alu" FT repeat_region 22183817..22184091 FT /rpt_family="Alu" FT misc_feature 22181543..22181647 FT /note="DPS similarity to Accession: gi|558846 (U15174) Nip3 FT [Homo sapiens];(AF002697) E1B 19K/Bcl-2-binding protein FT Nip3 [Homo sapiens]; (160..194); 60% identity. " FT repeat_region complement(22181282..22181526) FT /rpt_family="Alu" FT repeat_region complement(22180960..22181257) FT /rpt_family="Alu" FT misc_feature 22180445..22180918 FT /note="DPS similarity to Accession: gi|558846 (U15174) Nip3 FT [Homo sapiens];(AF002697) E1B 19K/Bcl-2-binding protein FT Nip3 [Homo sapiens]; (1..159); 61% identity." FT repeat_region complement(22177757..22178032) FT /rpt_family="Alu" FT repeat_region 22174271..22174560 FT /rpt_family="Alu" FT misc_feature complement(22173653..22174119) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 59.000" FT repeat_region complement(22171889..22174108) FT /rpt_family="L1" FT misc_feature complement(22173155..22173439) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 66.000" FT misc_feature complement(22172291..22172947) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: marginal, score: 40.000" FT misc_feature complement(22171585..22171711) FT /note="DDS similarity to AA135651 zl10a07.r1 Soares FT pregnant uterus NbHPU Homo sapiens cDNA clone 501492 5' FT similar to gb:L11672 ZINC FINGER PROTEIN 91 (HUMAN); FT (120..247); 98% identity.~BLASTX similarity to Q03923 FT (2..44); match: 0.93, score: 4.3e-22; database searched: FT nr; ZINC FINGER PROTEIN 85 (ZINC FINGER PROTEIN HPF4) FT (HTF1) >gi|1017722 (U35376) repressor transcriptional FT factor [Homo sapiens]~BLASTX similarity to Q03938 (2..44); FT match: 0.88, score: 2.3e-23; database searched: nr; ZINC FT FINGER PROTEIN 90 (ZINC FINGER PROTEIN HTF9) >pir||E39384 FT finger protein HTF9 - human (fragment) >gi|184452~Other FT overlapping matches: (64655..64855) predicted exon, FT program: grail2exons_human_1.3, frame: 1, quality: FT marginal, score: 49.000" FT misc_feature complement(22171521..22171541) FT /note="BLASTX similarity to Q03938 (79..85); match: 0.85, FT score: 2.3e-23; database searched: nr; ZINC FINGER PROTEIN FT 90 (ZINC FINGER PROTEIN HTF9) >pir||E39384 finger protein FT HTF9 - human (fragment) >gi|184452" FT repeat_region 22171132..22171517 FT /rpt_family="LTR3" FT misc_feature complement(22169800..22170113) FT /note="DDS similarity to AA135651 zl10a07.r1 Soares FT pregnant uterus NbHPU Homo sapiens cDNA clone 501492 5' FT similar to gb:L11672 ZINC FINGER PROTEIN 91 (HUMAN); FT (248..568); 95% identity." FT misc_feature complement(22170018..22170113) FT /note="BLASTX similarity to Q05481 (53..85); match: 0.69, FT score: 5.1e-07; database searched: nr; ZINC FINGER PROTEIN FT 91 (ZINC FINGER PROTEIN HTF10) (HPF7) >pir||S35305 finger FT protein ZNF91 - human >gi|186774 (L11672) zinc~BLASTX FT similarity to (38..70); match: 0.69, score: 2.6e-07; FT database searched: nr; finger protein HTF10 - human FT (fragment)~predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 100.000" FT repeat_region 22169352..22169577 FT /rpt_family="L1" FT misc_feature 22169091..22169150 FT /note="BLASTX similarity to (206..225); match: 0.55, FT score: 3.2e-12; database searched: nr; hypothetical L1 FT protein (third intron of gene TS) - human >prf||1510254A L1 FT repetitive element ORF [Homo sapiens]" FT misc_feature 22168051..22168142 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 56.000" FT repeat_region 22167083..22167387 FT /rpt_family="Alu" FT repeat_region 22160085..22166810 FT /rpt_family="L1" FT misc_feature 22166505..22166656 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 60.000" FT repeat_region 22164900..22165177 FT /rpt_family="Alu" FT repeat_region 22161814..22161892 FT /rpt_family="MER25" FT repeat_region complement(22159376..22159653) FT /rpt_family="Alu" FT misc_feature complement(22153993..22157609) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 89.000" FT misc_feature complement(22156447..22157609) FT /note="BLASTX similarity to Q05481 (86..472); match: 0.69, FT score: 0.0; database searched: nr; ZINC FINGER PROTEIN 91 FT (ZINC FINGER PROTEIN HTF10) (HPF7) >pir||S35305 finger FT protein ZNF91 - human >gi|186774 (L11672) zinc" FT misc_feature complement(22154972..22156146) FT /note="BLASTX similarity to Q05481 (473..864); match: 0.71, FT score: 0.0; database searched: nr; ZINC FINGER PROTEIN 91 FT (ZINC FINGER PROTEIN HTF10) (HPF7) >pir||S35305 finger FT protein ZNF91 - human >gi|186774 (L11672) zinc" FT misc_feature complement(22154004..22154887) FT /note="BLASTX similarity to Q05481 (865..1159); match: FT 0.71, score: 0.0; database searched: nr; ZINC FINGER FT PROTEIN 91 (ZINC FINGER PROTEIN HTF10) (HPF7) >pir||S35305 FT finger protein ZNF91 - human >gi|186774 (L11672) zinc" FT misc_feature complement(22153439..22153540) FT /note="BLASTX similarity to Q05481 (1160..1191); match: FT 0.71, score: 0.0; database searched: nr; ZINC FINGER FT PROTEIN 91 (ZINC FINGER PROTEIN HTF10) (HPF7) >pir||S35305 FT finger protein ZNF91 - human >gi|186774 (L11672) zinc" FT misc_feature complement(22152826..22153176) FT /note="BLASTX similarity to P28160 (301..417); match: 0.5, FT score: 1.6e-75; database searched: nr; ZINC FINGER PROTEIN FT 43 (ZINC PROTEIN HTF6) pir||S26823 finger protein ZNF43 - FT human >gi|38032 (X59244) ZNF43 gene product" FT repeat_region complement(22151925..22152028) FT /rpt_family="Alu" FT repeat_region 22151716..22151899 FT /rpt_family="Alu" FT repeat_region complement(22150487..22151660) FT /rpt_family="L1PA16" FT repeat_region complement(22150244..22150486) FT /rpt_family="AluSx" FT repeat_region complement(22148918..22150204) FT /rpt_family="L1PA16" FT repeat_region 22146667..22146933 FT /rpt_family="L1MA7" FT repeat_region complement(22143905..22145022) FT /rpt_family="MER11A" FT repeat_region 22143718..22143768 FT /rpt_family="Tigger2" FT repeat_region 22141758..22141896 FT /rpt_family="Alu" FT repeat_region complement(22140640..22140947) FT /rpt_family="L1" FT repeat_region complement(22139853..22140119) FT /rpt_family="Alu" FT repeat_region complement(22136559..22139764) FT /rpt_family="L1" FT repeat_region complement(22138223..22138408) FT /rpt_family="MER25" FT misc_feature complement(22136937..22137677) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 68.000" FT repeat_region 22134483..22136550 FT /rpt_family="L1" FT repeat_region 22135516..22135979 FT /rpt_family="MER25" FT repeat_region complement(22133296..22133576) FT /rpt_family="Alu" FT repeat_region 22132097..22132841 FT /rpt_family="HERV9" FT repeat_region 22131403..22131559 FT /rpt_family="HERV17" FT repeat_region 22130970..22131048 FT /rpt_family="HERV17" FT misc_feature 22130400..22130531 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 92.000" FT misc_feature 22129547..22129658 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 65.000" FT misc_feature 22127678..22127860 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 61.000" FT repeat_region complement(22125462..22125742) FT /rpt_family="Alu" FT misc_feature 22123917..22124069 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 73.000" FT repeat_region 22122838..22122921 FT /rpt_family="Alu" FT repeat_region complement(22122048..22122315) FT /rpt_family="Alu" FT repeat_region 22120585..22120752 FT /rpt_family="Alu" FT misc_feature complement(22118294..22118442) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 59.000" FT misc_feature complement(22117887..22118034) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 64.000" FT misc_feature complement(22113046..22113168) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 65.000" FT repeat_region complement(22110630..22110692) FT /rpt_family="BSR" FT repeat_region 22108311..22108600 FT /rpt_family="Alu" FT repeat_region 22107076..22107519 FT /rpt_family="MER41" FT misc_feature 22102328..22102400 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 70.000" FT repeat_region 22101389..22101797 FT /rpt_family="LTR7" FT repeat_region complement(22100563..22100867) FT /rpt_family="Alu" FT repeat_region complement(22097559..22097981) FT /rpt_family="Alu" FT repeat_region 22096301..22096829 FT /rpt_family="LTR9" FT repeat_region complement(22612453..22613291) FT /rpt_family="MER4-internal" FT repeat_region complement(22613943..22614192) FT /rpt_family="MER4-internal" FT repeat_region complement(22614193..22614487) FT /rpt_family="AluJo" FT repeat_region complement(22614488..22614557) FT /rpt_family="MER4-internal" FT repeat_region 22614558..22614852 FT /rpt_family="AluSc" FT repeat_region complement(22614853..22614944) FT /rpt_family="MER4-internal" FT repeat_region 22614945..22614996 FT /rpt_family="MER51B" FT repeat_region 22615172..22615197 FT /rpt_family="AT_rich" FT repeat_region complement(22615510..22615800) FT /rpt_family="AluSx" FT repeat_region complement(22615808..22615865) FT /rpt_family="MER5B" FT repeat_region 22615994..22616249 FT /rpt_family="AluSx" FT repeat_region complement(22616253..22616338) FT /rpt_family="BUR1" FT repeat_region complement(22616350..22616651) FT /rpt_family="AluSx" FT repeat_region complement(22616662..22616968) FT /rpt_family="AluSg" FT repeat_region 22616970..22617157 FT /rpt_family="MER57-internal" FT repeat_region 22617158..22617460 FT /rpt_family="AluSx" FT repeat_region 22617461..22618481 FT /rpt_family="MER57-internal" FT repeat_region 22618705..22618991 FT /rpt_family="AluSg" FT repeat_region complement(22619087..22619487) FT /rpt_family="L1PA8" FT repeat_region complement(22619492..22619789) FT /rpt_family="AluSq" FT repeat_region 22619801..22620092 FT /rpt_family="MER57-internal" FT repeat_region 22620093..22620403 FT /rpt_family="AluSg" FT repeat_region 22620405..22620578 FT /rpt_family="AluSg/x" FT repeat_region 22620625..22620869 FT /rpt_family="MER51-internal" FT repeat_region 22620870..22621300 FT /rpt_family="MER57-internal" FT repeat_region complement(22621301..22621601) FT /rpt_family="AluSx" FT repeat_region 22621602..22621898 FT /rpt_family="MER57-internal" FT repeat_region 22621911..22622197 FT /rpt_family="AluSc" FT repeat_region 22622198..22622309 FT /rpt_family="LTR54" FT repeat_region 22622311..22622419 FT /rpt_family="MER57-internal" FT repeat_region 22622420..22622729 FT /rpt_family="AluSx" FT repeat_region 22622730..22622809 FT /rpt_family="MER57-internal" FT repeat_region complement(22622810..22623105) FT /rpt_family="AluSx" FT repeat_region 22623106..22623153 FT /rpt_family="MER57-internal" FT repeat_region complement(22623156..22623379) FT /rpt_family="AluSp" FT repeat_region complement(22623412..22623732) FT /rpt_family="MER93" FT repeat_region 22623733..22623772 FT /rpt_family="CT-rich" FT repeat_region complement(22623783..22623952) FT /rpt_family="AluSq" FT repeat_region complement(22623999..22624150) FT /rpt_family="AluSg/x" FT repeat_region complement(22624151..22624449) FT /rpt_family="AluSq" FT repeat_region complement(22624450..22624609) FT /rpt_family="AluSx" FT repeat_region complement(22624610..22624931) FT /rpt_family="AluSp" FT repeat_region complement(22624932..22625030) FT /rpt_family="AluSx" FT repeat_region complement(22625031..22625045) FT /rpt_family="AluSg/x" FT repeat_region complement(22625049..22625535) FT /rpt_family="L1P" FT repeat_region 22625536..22625845 FT /rpt_family="AluY" FT repeat_region complement(22625846..22625911) FT /rpt_family="L1P" FT repeat_region complement(22625912..22626171) FT /rpt_family="AluSx" FT repeat_region complement(22626172..22626436) FT /rpt_family="L1P" FT repeat_region 22626437..22626740 FT /rpt_family="AluSx" FT repeat_region complement(22626741..22628510) FT /rpt_family="L1P" FT repeat_region complement(22628541..22628753) FT /rpt_family="AluY" FT repeat_region complement(22628764..22628876) FT /rpt_family="BUR1" FT repeat_region 22628877..22629022 FT /rpt_family="MER67C" FT repeat_region complement(22629023..22629336) FT /rpt_family="AluSg1" FT misc_feature 22629219..22629603 FT /note="BLASTN similarity to AW088843 (1..385); match 1.0, FT score 4e-55; database searched: est; AW088843 NCI_CGAP_Ov23 FT Homo sapiens cDNA clone IMAGE:2595371 3' similar to FT contains Alu repetitive element; contains element LTR2 FT repetitive element" FT repeat_region complement(22629337..22629443) FT /rpt_family="BUR1" FT repeat_region 22629469..22629489 FT /rpt_family="AT_rich" FT repeat_region complement(22629863..22630132) FT /rpt_family="AluSg" FT repeat_region complement(22630154..22630325) FT /rpt_family="AluSg/x" FT repeat_region complement(22630862..22631153) FT /rpt_family="AluSx" FT repeat_region 22631705..22632135 FT /rpt_family="MER67C" FT repeat_region complement(22632138..22632225) FT /rpt_family="BUR1" FT repeat_region complement(22632234..22632494) FT /rpt_family="BUR1" FT repeat_region 22632498..22632605 FT /rpt_family="LTR56" FT repeat_region complement(22632606..22632902) FT /rpt_family="AluSx" FT repeat_region 22632903..22633260 FT /rpt_family="LTR56" FT repeat_region complement(22633261..22633814) FT /rpt_family="BUR1" FT repeat_region 22633815..22634112 FT /rpt_family="AluSx" FT repeat_region complement(22634113..22635380) FT /rpt_family="BUR1" FT repeat_region 22635381..22635455 FT /rpt_family="MIR" FT repeat_region complement(22635456..22635891) FT /rpt_family="BUR1" FT repeat_region complement(22635892..22635938) FT /rpt_family="MADE1" FT repeat_region complement(22635939..22636683) FT /rpt_family="BUR1" FT repeat_region 22636690..22636733 FT /rpt_family="(TTTA)n" FT repeat_region complement(22636734..22637010) FT /rpt_family="AluY" FT repeat_region complement(22637013..22637318) FT /rpt_family="L1P" FT repeat_region complement(22637319..22637624) FT /rpt_family="AluSx" FT repeat_region complement(22637625..22638928) FT /rpt_family="L1P" FT repeat_region complement(22638929..22639076) FT /rpt_family="BUR1" FT repeat_region 22639077..22639301 FT /rpt_family="MER67C" FT repeat_region complement(22640300..22640602) FT /rpt_family="AluSx" FT repeat_region 22641168..22641455 FT /rpt_family="MER67C" FT repeat_region 22641482..22641632 FT /rpt_family="MER67C" FT repeat_region complement(22641633..22642113) FT /rpt_family="BUR1" FT repeat_region 22642114..22642546 FT /rpt_family="LTR56" FT repeat_region complement(22642547..22644097) FT /rpt_family="BUR1" FT repeat_region 22644099..22644121 FT /rpt_family="(TTA)n" FT repeat_region complement(22644122..22644405) FT /rpt_family="AluSq" FT repeat_region complement(22644406..22644697) FT /rpt_family="BUR1" FT repeat_region 22644698..22644813 FT /rpt_family="MIR" FT repeat_region complement(22644814..22645019) FT /rpt_family="BUR1" FT repeat_region 22645020..22645123 FT /rpt_family="MER5A" FT repeat_region complement(22645124..22646319) FT /rpt_family="BUR1" FT repeat_region complement(22646424..22646635) FT /rpt_family="BUR1" FT repeat_region 22646636..22646717 FT /rpt_family="(TG)n" FT repeat_region complement(22646718..22646960) FT /rpt_family="BUR1" FT misc_feature 22647349..22647444 FT /pseudo FT /gene="ZNF85p" FT /note="DPS similarity to gi|1731445|sp|Q03923|ZN85_HUMAN FT ZINC FINGER PROTEIN 85 (ZINC FINGER PROTEIN HPF4) (HTF1) FT gi|1017722 (U35376) repressor transcriptional factor [Homo FT sapiens] (45..76); 62% identity." FT repeat_region complement(22647855..22648551) FT /rpt_family="L1" FT repeat_region complement(22648555..22649338) FT /rpt_family="L1M3a" FT repeat_region complement(22649339..22649450) FT /rpt_family="SINE" FT /note="FLAM_A repeat" FT repeat_region complement(22649464..22649568) FT /rpt_family="L1M3a" FT repeat_region complement(22650591..22650646) FT /rpt_family="L1MB2" FT repeat_region 22650647..22650777 FT /rpt_family="AluJo" FT repeat_region complement(22650925..22652484) FT /rpt_family="L1MB2" FT repeat_region complement(22652495..22652601) FT /rpt_family="L1" FT repeat_region complement(22652602..22652819) FT /rpt_family="AluJb" FT misc_feature 22653756..22654963 FT /pseudo FT /gene="ZNF85p" FT /note="DPS similarity to gi|1731445|sp|Q03923|ZN85_HUMAN FT ZINC FINGER PROTEIN 85 (ZINC FINGER PROTEIN HPF4) (HTF1) FT gi|1017722 (U35376) repressor transcriptional factor [Homo FT sapiens] (77..478)." FT misc_feature 22655134..22655485 FT /pseudo FT /gene="ZNF85p" FT /note="DPS similarity to gi|1731445|sp|Q03923|ZN85_HUMAN FT ZINC FINGER PROTEIN 85 (ZINC FINGER PROTEIN HPF4) (HTF1) FT gi|1017722 (U35376) repressor transcriptional factor [Homo FT sapiens] (479..595)." FT repeat_region 22655875..22656150 FT /rpt_family="Alu" FT misc_feature 22656781..22656847 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 64.000" FT repeat_region complement(22657051..22657364) FT /rpt_family="Alu" FT repeat_region complement(22660068..22660364) FT /rpt_family="Alu" FT repeat_region complement(22660439..22660706) FT /rpt_family="Alu" FT repeat_region complement(22661098..22661376) FT /rpt_family="Alu" FT repeat_region complement(22661393..22662814) FT /rpt_family="L1" FT repeat_region 22662825..22665120 FT /rpt_family="L1M1" FT repeat_region complement(22665153..22665213) FT /rpt_family="L1" FT repeat_region complement(22666535..22666822) FT /rpt_family="Alu" FT repeat_region complement(22666978..22667243) FT /rpt_family="LTR4" FT repeat_region complement(22667338..22668398) FT /rpt_family="HSRIRT" FT /note="LTR/Retroviral repeat" FT repeat_region complement(22668433..22670741) FT /rpt_family="HERV3" FT repeat_region complement(22672099..22672379) FT /rpt_family="Alu" FT repeat_region complement(22674167..22674410) FT /rpt_family="L1MA9" FT repeat_region 22674607..22675270 FT /rpt_family="LTR1" FT repeat_region complement(22675916..22675975) FT /rpt_family="microsatellite" FT /rpt_type=TANDEM FT /rpt_unit_seq="(GAAAA)n" FT repeat_region complement(22676436..22676724) FT /rpt_family="Alu" FT misc_feature 22676440..22676858 FT /note="DDS similarity to AA130809 zo11a08.s1 Stratagene FT neuroepithelium NT2RAMI 937234 Homo sapiens cDNA clone FT 567350 3' similar to contains Alu repetitive~element; FT Score: 825 Identity: 417/418 (99%)." FT repeat_region 22677496..22678151 FT /rpt_family="HERV17" FT repeat_region 22678723..22678889 FT /rpt_family="LTR1" FT repeat_region 22679969..22680246 FT /rpt_family="Alu" FT repeat_region 22680234..22680791 FT /rpt_family="MER42" FT repeat_region complement(22680989..22681705) FT /rpt_family="LTR12" FT repeat_region complement(22682881..22683151) FT /rpt_family="Alu" FT repeat_region complement(22683680..22683765) FT /rpt_family="MIR" FT misc_feature 22684890..22685222 FT /note="DDS similarity to overlapping ESTs:~(38419..38590) FT AA583271 nn41g04.s1 NCI_CGAP_GC5 Homo sapiens cDNA clone FT IMAGE:1086486; Score: 344 Identity: 172/172 FT (100%).~~(38433..38751) AA130848 zo11g06.s1 Stratagene FT neuroepithelium NT2RAMI 937234 Homo sapiens cDNA clone FT 567418 3'; Score: 631 Identity: 319/320 (99%)." FT misc_feature complement(22686460..22686705) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 66.000" FT repeat_region 22686726..22686931 FT /rpt_family="L1" FT misc_feature 22688187..22688372 FT /note="BLASTX similarity to 181851 (3..64); match: 0.72, FT score: 5.2e-21; database searched: nr; (L07808) dynamin FT [Homo sapiens]" FT repeat_region complement(22688968..22689214) FT /rpt_family="Alu" FT repeat_region complement(22689549..22689876) FT /rpt_family="Alu" FT repeat_region complement(22690107..22690223) FT /rpt_family="Alu" FT misc_feature 23506915..23507124 FT /note="NOTE: Unresolved dinucleotide repeat region FT 39116-39325. Forced join 39166." FT misc_feature 23648570..23650760 FT /note="NOTE: Shatter libraries failed to resolve FT dinucleotide repeat region from 2790 to 4980. False joins FT at 3580 and 4280." FT misc_feature 24602541..24631782 FT /note="NOTE: Large tandem repeat 147700-176941. There are FT possibly more repeat copies than are represented in this FT assembly." FT gap 24631783..24681782 FT /estimated_length=50000 FT gap 24681783..27681782 FT /estimated_length=3000000 FT gap 27681783..27731782 FT /estimated_length=50000 FT repeat_region complement(28155926..28156065) FT /rpt_family="ALR" FT repeat_region complement(28156257..28156389) FT /rpt_family="ALR" FT repeat_region complement(28156421..28156564) FT /rpt_family="ALR" FT repeat_region complement(28156586..28156746) FT /rpt_family="ALR" FT repeat_region complement(28156758..28156913) FT /rpt_family="ALR" FT repeat_region complement(28157962..28158118) FT /rpt_family="ALR" FT repeat_region complement(28158649..28158809) FT /rpt_family="ALR" FT repeat_region complement(28158821..28158965) FT /rpt_family="ALR" FT repeat_region complement(28159098..28159238) FT /rpt_family="ALR" FT repeat_region complement(28159264..28159412) FT /rpt_family="ALR" FT repeat_region complement(28159431..28159589) FT /rpt_family="ALR" FT repeat_region complement(28159601..28159760) FT /rpt_family="ALR" FT repeat_region complement(28159902..28160024) FT /rpt_family="ALR" FT repeat_region complement(28160036..28160189) FT /rpt_family="ALR" FT misc_feature complement(28161557..28161656) FT /note="BLASTN similarity to U92458 (157..256); match: 1, FT score: 1.1e-33; database searched: nt; Human metabotropic FT glutamate receptor 7 mRNA, complete cds" FT repeat_region 28161661..28161952 FT /rpt_family="AluSc" FT repeat_region complement(28169415..28169701) FT /rpt_family="LTR5" FT repeat_region complement(28170179..28170454) FT /rpt_family="AluSc" FT repeat_region 28171100..28171370 FT /rpt_family="AluSx" FT repeat_region complement(28171822..28171994) FT /rpt_family="ALR" FT repeat_region complement(28171994..28172147) FT /rpt_family="ALR" FT repeat_region complement(28172337..28172490) FT /rpt_family="ALR" FT repeat_region complement(28172677..28172830) FT /rpt_family="ALR" FT repeat_region complement(28172848..28173016) FT /rpt_family="ALR" FT repeat_region complement(28173702..28173862) FT /rpt_family="ALR" FT repeat_region complement(28173959..28174026) FT /rpt_family="ALR" FT repeat_region complement(28174568..28174714) FT /rpt_family="ALR" FT repeat_region complement(28175075..28175225) FT /rpt_family="ALR" FT repeat_region complement(28175586..28175736) FT /rpt_family="ALR" FT repeat_region 28176186..28176215 FT /rpt_family="POLY_A" FT repeat_region complement(28176297..28176458) FT /rpt_family="ALR" FT repeat_region complement(28176640..28176784) FT /rpt_family="ALR" FT repeat_region complement(28176811..28176961) FT /rpt_family="ALR" FT repeat_region complement(28176980..28177133) FT /rpt_family="ALR" FT repeat_region complement(28177163..28177308) FT /rpt_family="ALR" FT repeat_region complement(28177482..28177642) FT /rpt_family="ALR" FT repeat_region complement(28177659..28177814) FT /rpt_family="ALR" FT repeat_region complement(28177831..28177979) FT /rpt_family="ALR" FT repeat_region complement(28177998..28178158) FT /rpt_family="ALR" FT repeat_region complement(28178175..28178315) FT /rpt_family="ALR" FT repeat_region complement(28178516..28178655) FT /rpt_family="ALR" FT repeat_region complement(28179204..28179349) FT /rpt_family="ALR" FT repeat_region complement(28179541..28179696) FT /rpt_family="ALR" FT repeat_region complement(28179777..28179872) FT /rpt_family="ALR" FT repeat_region complement(28179880..28180033) FT /rpt_family="ALR" FT repeat_region complement(28180224..28180379) FT /rpt_family="ALR" FT repeat_region complement(28186144..28186241) FT /rpt_family="ALR" FT repeat_region complement(28186356..28192495) FT /rpt_family="L1PA2" FT repeat_region complement(28192497..28192637) FT /rpt_family="ALR" FT repeat_region complement(28193010..28193163) FT /rpt_family="ALR" FT repeat_region 28193262..28193294 FT /rpt_family="POLY_A" FT repeat_region complement(28194366..28195284) FT /rpt_family="MER11B" FT repeat_region complement(28195283..28195434) FT /rpt_family="MER11A" FT repeat_region complement(28195521..28196369) FT /rpt_family="HERVK" FT repeat_region complement(28196987..28197204) FT /rpt_family="HERVK" FT misc_feature complement(28197407..28197581) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 65.000" FT repeat_region complement(28197570..28199380) FT /rpt_family="HERVK" FT repeat_region complement(28197570..28201943) FT /rpt_family="HERVK" FT repeat_region complement(28202753..28202962) FT /rpt_family="HERVK" FT repeat_region complement(28203150..28204071) FT /rpt_family="MER11B" FT repeat_region complement(28204070..28204218) FT /rpt_family="MER11A" FT repeat_region complement(28204427..28204579) FT /rpt_family="ALR" FT repeat_region complement(28204597..28204757) FT /rpt_family="ALR" FT repeat_region complement(28205113..28205273) FT /rpt_family="ALR" FT repeat_region complement(28205457..28205623) FT /rpt_family="ALR" FT repeat_region complement(28205635..28205781) FT /rpt_family="ALR" FT repeat_region complement(28205971..28206129) FT /rpt_family="ALR" FT repeat_region complement(28206500..28206654) FT /rpt_family="ALR" FT repeat_region complement(28212120..28212271) FT /rpt_family="ALR" FT repeat_region complement(28212283..28212440) FT /rpt_family="ALR" FT repeat_region complement(28212452..28212619) FT /rpt_family="ALR" FT repeat_region complement(28212624..28212783) FT /rpt_family="ALR" FT repeat_region complement(28213126..28213284) FT /rpt_family="ALR" FT repeat_region complement(28213304..28213456) FT /rpt_family="ALR" FT repeat_region complement(28213468..28213623) FT /rpt_family="ALR" FT repeat_region complement(28213811..28213970) FT /rpt_family="ALR" FT repeat_region complement(28214219..28214320) FT /rpt_family="ALR" FT repeat_region complement(28214331..28214483) FT /rpt_family="ALR" FT repeat_region complement(28214502..28214663) FT /rpt_family="ALR" FT repeat_region complement(28215018..28215170) FT /rpt_family="ALR" FT repeat_region complement(28215194..28215336) FT /rpt_family="ALR" FT repeat_region complement(28215372..28215500) FT /rpt_family="ALR" FT repeat_region complement(28215752..28215845) FT /rpt_family="ALR" FT repeat_region complement(28215865..28216021) FT /rpt_family="ALR" FT repeat_region complement(28216036..28216183) FT /rpt_family="ALR" FT repeat_region complement(28216210..28216369) FT /rpt_family="ALR" FT repeat_region complement(28216456..28216589) FT /rpt_family="ALR" FT repeat_region complement(28216594..28216744) FT /rpt_family="ALR" FT repeat_region complement(28216763..28216916) FT /rpt_family="ALR" FT repeat_region complement(28216934..28217094) FT /rpt_family="ALR" FT repeat_region complement(28217111..28217246) FT /rpt_family="ALR" FT repeat_region complement(28217794..28217954) FT /rpt_family="ALR" FT repeat_region complement(28217966..28218126) FT /rpt_family="ALR" FT repeat_region complement(28218142..28218297) FT /rpt_family="ALR" FT repeat_region 28218422..28218691 FT /rpt_family="AluY" FT repeat_region complement(28218846..28218947) FT /rpt_family="ALR" FT repeat_region complement(28218959..28219118) FT /rpt_family="ALR" FT repeat_region complement(28219473..28219627) FT /rpt_family="ALR" FT repeat_region complement(28219818..28219985) FT /rpt_family="ALR" FT repeat_region complement(28220169..28220316) FT /rpt_family="ALR" FT repeat_region complement(28220519..28220672) FT /rpt_family="ALR" FT repeat_region complement(28220764..28220854) FT /rpt_family="ALR" FT repeat_region complement(28220865..28221020) FT /rpt_family="ALR" FT misc_feature complement(28221173..28221615) FT /note="DDS similarity to AA487467 ab23b06.s1 Stratagene FT lung (#937210) Homo sapiens cDNA clone 841619 3'; (443..1); FT 99% identity.~" FT repeat_region complement(28221347..28221506) FT /rpt_family="ALR" FT repeat_region complement(28222069..28222231) FT /rpt_family="ALR" FT repeat_region complement(28222236..28222392) FT /rpt_family="ALR" FT repeat_region complement(28222578..28222730) FT /rpt_family="ALR" FT repeat_region complement(28222755..28222899) FT /rpt_family="ALR" FT repeat_region complement(28223428..28223574) FT /rpt_family="ALR" FT misc_feature complement(28223704..28223754) FT /note="DDS similarity to AA487467 ab23b06.s1 Stratagene FT lung (#937210) Homo sapiens cDNA clone 841619 3'; FT (494..444); 98% identity.~" FT misc_feature complement(28223715..28223876) FT /note="BLASTN similarity to R16242 (169..330); match: 1, FT score: 5.3e-58; database searched: est; ya49d06.r2 Homo FT sapiens cDNA clone 53391 5'." FT repeat_region complement(28223775..28223928) FT /rpt_family="ALR" FT repeat_region complement(28223956..28224114) FT /rpt_family="ALR" FT misc_feature 28237900..28238057 FT /note="BLASTN similarity to cpg7g3.f1a (1..156); match: FT 0.97, score: 4.8e-46; database searched: Sanger CpG; bases FT 101 to 256 (SL to QR)" FT misc_feature complement(28238106..28238283) FT /note="BLASTN similarity to cpg7g3.rpt1h (15..192); match: FT 0.97, score: 8.4e-64; database searched: Sanger CpG; bases FT 73 to 264 (SL to QR)" FT repeat_region 28238488..28239783 FT /rpt_family="HERVK" FT repeat_region 28239846..28240036 FT /rpt_family="HERVKC4" FT repeat_region 28240039..28240346 FT /rpt_family="AluY" FT repeat_region 28240352..28240560 FT /rpt_family="HERVKC4" FT repeat_region 28240663..28240840 FT /rpt_family="IAP" FT repeat_region 28241161..28241838 FT /rpt_family="HERVKC4" FT repeat_region complement(28247990..28248061) FT /rpt_family="POLY_A" FT repeat_region 28248072..28248101 FT /rpt_family="(TA)n" FT repeat_region complement(28248109..28248254) FT /rpt_family="L1PA4" FT misc_feature complement(28262571..28262740) FT /note="BLASTN similarity to R16242 (1..170); match: 1, FT score: 1.6e-61; database searched: est; ya49d06.r2 Homo FT sapiens cDNA clone 53391 5'." FT repeat_region complement(28262630..28262720) FT /rpt_family="AluJb" FT repeat_region 28262906..28262936 FT /rpt_family="(GA)n" FT repeat_region complement(28264897..28264997) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(28265465..28265555) FT /rpt_family="AluJo/FRAM" FT repeat_region complement(28266299..28266413) FT /rpt_family="(TAAA)n" FT repeat_region complement(28266550..28266640) FT /rpt_family="AluJo/FRAM" FT misc_feature complement(28267353..28267677) FT /note="BLASTN similarity to Z54221 (1..341); match: 0.89, FT score: 2.2e-109; database searched: nt; H.sapiens DNA for FT matrix attachment region" FT repeat_region complement(28267509..28267547) FT /rpt_family="(CAGA)n" FT misc_feature 28268256..28268543 FT /note="BLASTN similarity to AI376552 (119..406); match: FT 0.99, score: 2.8e-114; database searched: month.na; FT te64e11.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone FT IMAGE:2091500 3', mRNA sequence [Homo sapiens]" FT repeat_region complement(28268585..28268725) FT /rpt_family="(TAAA)n" FT repeat_region complement(28268943..28269248) FT /rpt_family="AluSc" FT misc_feature complement(28269420..28269644) FT /note="BLASTN similarity to Z28482 (2..226); match: 0.99, FT score: 1.1e-85; database searched: est; H. sapiens partial FT cDNA sequence, clone 20F10" FT repeat_region complement(28269464..28269564) FT /rpt_family="(TAAA)n" FT misc_feature complement(28269548..28269951) FT /note="DDS similarity to AA397527 zt87g04.r1 Soares testis FT NHT Homo sapiens cDNA clone 729366 5'; (34..438); 99% FT identity.~" FT repeat_region complement(28269787..28269937) FT /rpt_family="POLY_A" FT repeat_region 28269960..28269991 FT /rpt_family="(GA)n" FT repeat_region complement(28270030..28270111) FT /rpt_family="(TAAA)n" FT repeat_region complement(28270635..28270793) FT /rpt_family="AluJb" FT repeat_region complement(28270813..28271071) FT /rpt_family="AluSg/x" FT repeat_region complement(28271256..28271380) FT /rpt_family="(TAAA)n" FT repeat_region complement(28271491..28271575) FT /rpt_family="AluJo/FRAM" FT repeat_region 28271779..28271833 FT /rpt_family="AluJ/FRAM" FT repeat_region 28271836..28271886 FT /rpt_family="(GA)n" FT repeat_region complement(28272009..28272324) FT /rpt_family="AluJb" FT repeat_region complement(28272661..28272741) FT /rpt_family="LINE2" FT repeat_region 28273692..28273971 FT /rpt_family="AluSc" FT repeat_region 28274906..28275040 FT /rpt_family="L1MC2" FT repeat_region 28275041..28275165 FT /rpt_family="FLAM_C" FT repeat_region 28275172..28277611 FT /rpt_family="L1MC2" FT repeat_region 28277722..28278733 FT /rpt_family="L1M3/4" FT repeat_region 28278753..28279052 FT /rpt_family="AluSx" FT repeat_region 28279074..28279349 FT /rpt_family="L1" FT repeat_region complement(28279352..28279601) FT /rpt_family="AluSc" FT repeat_region 28279609..28280096 FT /rpt_family="L1" FT repeat_region complement(28280059..28280245) FT /rpt_family="L1PA2" FT repeat_region 28280243..28281369 FT /rpt_family="L1PA2" FT repeat_region 28281389..28282042 FT /rpt_family="L1" FT repeat_region 28282045..28282484 FT /rpt_family="L1" FT repeat_region 28282524..28282825 FT /rpt_family="AluSc" FT repeat_region 28282982..28283030 FT /rpt_family="(CATA)n" FT repeat_region 28283246..28283448 FT /rpt_family="L1M4" FT misc_feature complement(28283908..28283940) FT /note="DDS similarity to AA397527 zt87g04.r1 Soares testis FT NHT Homo sapiens cDNA clone 729366 5'; (1..33); 100% FT identity.~" FT misc_feature 28284203..28284449 FT /note="BLASTN similarity to cpg25a9.ft1a (1..248); match: FT 0.95, score: 5.5e-84; database searched: CpG; bases 113 to FT 360 (QL to QR)" FT misc_feature 28284396..28284558 FT /note="DDS similarity to overlapping ESTs:~(86827..86989) FT W95964 ze08f02.r1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 358395 5'; (1..162); 98% FT identity.~~(86898..86989) H05847 yl73c03.r1 Homo sapiens FT cDNA clone 43815 5'; (1..92); 100% identity.~~" FT misc_feature 28284397..28284517 FT /note="DDS similarity to overlapping ESTs:~AA357601 FT EST66378 LNCAP cells I Homo sapiens cDNA 5' end; (1..121); FT 98% identity.~~AA279579 zs86d09.r1 NCI_CGAP_GCB1 Homo FT sapiens cDNA clone IMAGE:704369 5'; (1..120); 99% FT identity.~~" FT repeat_region 28287005..28287334 FT /rpt_family="L1PB2" FT repeat_region complement(28287353..28287394) FT /rpt_family="AT_rich" FT repeat_region 28288385..28288477 FT /rpt_family="L1M4" FT misc_feature 28288662..28288977 FT /note="DDS similarity to overlapping ESTs:~(91093..91378) FT AA357601 EST66378 LNCAP cells I Homo sapiens cDNA 5' end; FT (122..407); 97% identity.~~(91093..91396) AA279579 FT zs86d09.r1 NCI_CGAP_GCB1 Homo sapiens cDNA clone FT IMAGE:704369 5'; (121..422); 98% identity.~~(91093..91408) FT W95964 ze08f02.r1 Soares fetal heart NbHH19W Homo sapiens FT cDNA clone 358395 5'; (163..485); 97% FT identity.~~(91093..91397) H05847 yl73c03.r1 Homo sapiens FT cDNA clone 43815 5'; (93..414); 91% identity." FT repeat_region 28289194..28289231 FT /rpt_family="POLY_A" FT repeat_region complement(28289282..28289480) FT /rpt_family="AluSg/x" FT repeat_region 28289628..28289668 FT /rpt_family="AT_rich" FT repeat_region 28290156..28290221 FT /rpt_family="MER53" FT repeat_region 28290222..28290370 FT /rpt_family="MER11A" FT repeat_region 28290369..28291283 FT /rpt_family="MER11B" FT repeat_region 28291365..28291397 FT /rpt_family="(CA)n" FT repeat_region complement(28292739..28293385) FT /rpt_family="LTR13" FT repeat_region complement(28293383..28293750) FT /rpt_family="LTR13" FT repeat_region 28293753..28293929 FT /rpt_family="MLT1D" FT repeat_region complement(28295141..28295196) FT /rpt_family="AT_rich" FT repeat_region 28295320..28295610 FT /rpt_family="AluSx" FT misc_feature complement(28296335..28296463) FT /note="BLASTX similarity to PID (276..318); match: 0.76, FT score: 1.2e-112; database searched: nr; (X96924) FT mitochondrial citrate transport protein [Homo sapiens]" FT misc_feature complement(28296475..28296495) FT /note="BLASTX similarity to PID (264..270); match: 0.85, FT score: 1.2e-112; database searched: nr; (X96924) FT mitochondrial citrate transport protein [Homo sapiens]" FT misc_feature complement(28296492..28296737) FT /note="BLASTX similarity to PID (183..264); match: 0.65, FT score: 1.2e-112; database searched: nr; (X96924) FT mitochondrial citrate transport protein [Homo sapiens]" FT misc_feature complement(28296707..28296883) FT /note="BLASTX similarity to PID (131..189); match: 0.55, FT score: 1.2e-112; database searched: nr; (X96924) FT mitochondrial citrate transport protein [Homo sapiens]" FT misc_feature complement(28296880..28296933) FT /note="BLASTX similarity to PID (114..131); match: 0.66, FT score: 1.2e-112; database searched: nr; (X96924) FT mitochondrial citrate transport protein [Homo sapiens]" FT misc_feature complement(28296941..28297012) FT /note="BLASTX similarity to PID (83..106); match: 0.7, FT score: 1.2e-112; database searched: nr; (X96924) FT mitochondrial citrate transport protein [Homo sapiens]" FT misc_feature complement(28297045..28297116) FT /note="BLASTX similarity to PID (46..69); match: 0.75, FT score: 1.2e-112; database searched: nr; (X96924) FT mitochondrial citrate transport protein [Homo sapiens]" FT repeat_region complement(28297116..28297182) FT /rpt_family="(GGAA)n" FT repeat_region complement(28297183..28297477) FT /rpt_family="AluSq" FT misc_feature 28297630..28297955 FT /note="BLASTN similarity to AQ352311 (1..326); match: 0.99, FT score: 2.2e-139; database searched: month.na; FT CITBI-E1-2536H3.TF CITBI-E1 Homo sapiens genomic clone FT 2536H3, genomic survey sequence [Homo sapiens]" FT repeat_region 28297942..28298719 FT /rpt_family="L1" FT misc_feature 28297945..28297997 FT /note="BLASTN similarity to AQ352311 (314..366); match: FT 0.66, score: 2.2e-136; database searched: month.na; FT CITBI-E1-2536H3.TF CITBI-E1 Homo sapiens genomic clone FT 2536H3, genomic survey sequence [Homo sapiens]" FT repeat_region 28298718..28300045 FT /rpt_family="L1MA1" FT repeat_region complement(28300066..28300270) FT /rpt_family="AluSq" FT repeat_region 28300282..28300461 FT /rpt_family="L1MA2" FT repeat_region 28300462..28300580 FT /rpt_family="(TAAAA)n" FT repeat_region complement(28300743..28300903) FT /rpt_family="L1M" FT repeat_region complement(28300904..28301203) FT /rpt_family="AluSx" FT repeat_region complement(28301205..28302124) FT /rpt_family="L1" FT repeat_region 28302230..28302300 FT /rpt_family="(TA)n" FT repeat_region complement(28302356..28302383) FT /rpt_family="AT_rich" FT repeat_region 28302443..28302720 FT /rpt_family="AluSq" FT repeat_region 28302734..28302823 FT /rpt_family="(TAA)n" FT repeat_region 28302836..28303645 FT /rpt_family="L1MB5" FT repeat_region complement(28304402..28304446) FT /rpt_family="(CA)n" FT repeat_region 28305162..28305388 FT /rpt_family="LTR5" FT repeat_region 28305389..28305712 FT /rpt_family="L1PA4" FT repeat_region 28305715..28306460 FT /rpt_family="LTR5" FT repeat_region complement(28306736..28307969) FT /rpt_family="L1PA15" FT repeat_region complement(28307986..28308285) FT /rpt_family="L1PA8" FT repeat_region complement(28308258..28308938) FT /rpt_family="L1" FT repeat_region 28308939..28309195 FT /rpt_family="AluY" FT repeat_region complement(28309196..28310233) FT /rpt_family="L1" FT repeat_region 28310241..28311635 FT /rpt_family="L1PA6" FT repeat_region 28311638..28311658 FT /rpt_family="AT_rich" FT repeat_region complement(28311659..28314125) FT /rpt_family="L1P5" FT repeat_region 28314620..28314987 FT /rpt_family="MER31" FT repeat_region complement(28316355..28316436) FT /rpt_family="LINE2" FT repeat_region complement(28317612..28318094) FT /rpt_family="L1" FT repeat_region complement(28318096..28318238) FT /rpt_family="L1" FT repeat_region complement(28318874..28318946) FT /rpt_family="L1MB7" FT repeat_region complement(28318947..28319240) FT /rpt_family="AluJb" FT repeat_region complement(28319241..28319397) FT /rpt_family="L1MB7" FT repeat_region 28319464..28319688 FT /rpt_family="AluSx" FT repeat_region complement(28319702..28319949) FT /rpt_family="L1MB7" FT repeat_region complement(28319947..28320417) FT /rpt_family="L1" FT repeat_region complement(28320479..28320542) FT /rpt_family="L1" FT repeat_region complement(28320543..28320841) FT /rpt_family="AluSq" FT repeat_region complement(28320842..28321464) FT /rpt_family="L1" FT repeat_region complement(28322738..28323030) FT /rpt_family="AluSq" FT repeat_region complement(28323641..28323716) FT /rpt_family="(TAAAA)n" FT repeat_region complement(28323721..28324006) FT /rpt_family="AluJb" FT repeat_region complement(28324426..28324545) FT /rpt_family="MIR" FT repeat_region 28324977..28325005 FT /rpt_family="AT_rich" FT repeat_region 28325109..28325204 FT /rpt_family="(TA)n" FT repeat_region complement(28325303..28325493) FT /rpt_family="AluSg/x" FT repeat_region 28325599..28325902 FT /rpt_family="AluSq" FT repeat_region 28325995..28327007 FT /rpt_family="L1M3/4" FT misc_feature 28327008..28327192 FT /note="BLASTN similarity to AQ350110 (213..397); match: 1, FT score: 3.7e-70; database searched: month.na; FT RPCI11-109F17.TJB RPCI11 Homo sapiens genomic clone FT R-109F17, genomic survey sequence [Homo sapiens]" FT repeat_region complement(28327017..28327157) FT /rpt_family="MLT2" FT repeat_region 28327158..28327189 FT /rpt_family="(GA)n" FT repeat_region complement(28327216..28327519) FT /rpt_family="AluSq" FT repeat_region complement(28327522..28327664) FT /rpt_family="MLT2" FT repeat_region complement(28327678..28327952) FT /rpt_family="AluJo" FT repeat_region 28328211..28328312 FT /rpt_family="(TAA)n" FT repeat_region complement(28328443..28329837) FT /rpt_family="HERVL" FT repeat_region complement(28329868..28330083) FT /rpt_family="AluJo" FT repeat_region complement(28330175..28330236) FT /rpt_family="(CA)n" FT repeat_region complement(28330938..28331161) FT /rpt_family="AluJo" FT repeat_region complement(28331695..28331741) FT /rpt_family="POLY_A" FT repeat_region 28331780..28331889 FT /rpt_family="MER4A2" FT repeat_region 28331890..28332182 FT /rpt_family="AluSx" FT repeat_region 28332183..28332527 FT /rpt_family="MER4A" FT repeat_region complement(28332529..28332726) FT /rpt_family="AluSq" FT repeat_region complement(28333007..28333141) FT /rpt_family="HERVL" FT repeat_region complement(28333235..28333401) FT /rpt_family="HERV9" FT repeat_region complement(28333427..28335849) FT /rpt_family="HERVH" FT repeat_region complement(28336662..28337021) FT /rpt_family="HERVH" FT repeat_region complement(28337842..28338098) FT /rpt_family="PABL_B" FT repeat_region complement(28338103..28338213) FT /rpt_family="AluSq" FT repeat_region 28343613..28349727 FT /rpt_family="L1PA2" FT misc_feature 28350857..28351516 FT /note="BLASTN similarity to AQ350323 (1..660); match: 0.99, FT score: 3.6e-265; database searched: month.na; FT RPCI11-133D2.TJ RPCI11 Homo sapiens genomic clone R-133D2, FT genomic survey sequence [Homo sapiens]" FT repeat_region 28353379..28353416 FT /rpt_family="(TA)n" FT repeat_region complement(28353421..28356862) FT /rpt_family="L1PA2" FT repeat_region 28357843..28357875 FT /rpt_family="AT_rich" FT repeat_region complement(28358137..28358428) FT /rpt_family="AluY" FT repeat_region complement(28358434..28358727) FT /rpt_family="AluJb" FT repeat_region complement(28358736..28358849) FT /rpt_family="MLT1E" FT repeat_region complement(28359641..28359943) FT /rpt_family="AluSp" FT repeat_region complement(28359963..28360024) FT /rpt_family="(TAAAA)n" FT repeat_region 28360885..28362876 FT /rpt_family="L1MC1" FT repeat_region 28362927..28363000 FT /rpt_family="L1MD1" FT repeat_region 28363074..28363172 FT /rpt_family="LINE2" FT repeat_region 28363281..28363396 FT /rpt_family="AluJo/FRAM" FT repeat_region complement(28363402..28363538) FT /rpt_family="(CAT)n" FT repeat_region 28363859..28364159 FT /rpt_family="AluSx" FT repeat_region complement(28364429..28364463) FT /rpt_family="POLY_A" FT repeat_region complement(28365521..28365939) FT /rpt_family="MSTA" FT repeat_region complement(28366010..28366061) FT /rpt_family="AT_rich" FT repeat_region 28367859..28368494 FT /rpt_family="LTR9" FT repeat_region 28369113..28369231 FT /rpt_family="HERV17" FT repeat_region 28369482..28373903 FT /rpt_family="HERV17" FT repeat_region 28376100..28376186 FT /rpt_family="HERV9" FT repeat_region 28376210..28376352 FT /rpt_family="LTR9" FT repeat_region 28376489..28376826 FT /rpt_family="LTR9" FT repeat_region 28376841..28376926 FT /rpt_family="MIR" FT repeat_region complement(28376981..28377370) FT /rpt_family="L1MA2" FT repeat_region complement(28378226..28378315) FT /rpt_family="MIR" FT repeat_region complement(28378373..28378713) FT /rpt_family="THE1C" FT repeat_region 28382738..28383115 FT /rpt_family="THE1C" FT misc_feature complement(28383755..28383841) FT /note="BLASTX similarity to 2160517 (463..491); match: FT 0.48, score: 9.8e-91; database searched: nr; (U42408) FT ladinin [Homo sapiens]" FT misc_feature complement(28384416..28384475) FT /note="BLASTX similarity to 2160517 (392..411); match: 0.7, FT score: 9.8e-91; database searched: nr; (U42408) ladinin FT [Homo sapiens]" FT repeat_region 28385010..28385088 FT /rpt_family="LINE2" FT misc_feature complement(28387420..28387623) FT /note="BLASTX similarity to 2160517 (276..343); match: FT 0.52, score: 9.8e-91; database searched: nr; (U42408) FT ladinin [Homo sapiens]" FT misc_feature complement(28387845..28387991) FT /note="BLASTX similarity to 2160517 (181..229); match: FT 0.65, score: 9.8e-91; database searched: nr; (U42408) FT ladinin [Homo sapiens]" FT misc_feature complement(28388017..28388115) FT /note="BLASTX similarity to 2160517 (139..171); match: FT 0.72, score: 9.8e-91; database searched: nr; (U42408) FT ladinin [Homo sapiens]" FT misc_feature complement(28388157..28388249) FT /note="BLASTX similarity to 2160517 (94..124); match: 0.58, FT score: 1.3e-07; database searched: nr; (U42408) ladinin FT [Homo sapiens]" FT misc_feature complement(28388235..28388297) FT /note="BLASTX similarity to 2160517 (76..96); match: 0.57, FT score: 1.3e-07; database searched: nr; (U42408) ladinin FT [Homo sapiens]" FT repeat_region 28389357..28389429 FT /rpt_family="MIR" FT misc_feature complement(28389720..28389803) FT /note="BLASTX similarity to 2160517 (23..50); match: 0.5, FT score: 1.3e-07; database searched: nr; (U42408) ladinin FT [Homo sapiens]" FT repeat_region 28389939..28390193 FT /rpt_family="MER33" FT repeat_region complement(28390230..28390436) FT /rpt_family="MER20" FT repeat_region complement(28391935..28392756) FT /rpt_family="LINE2" FT repeat_region complement(28393145..28393191) FT /rpt_family="L1ME3" FT repeat_region 28394513..28394551 FT /rpt_family="MIR" FT repeat_region complement(28394667..28394745) FT /rpt_family="MIR" FT repeat_region 28394759..28395060 FT /rpt_family="AluSx" FT repeat_region 28397343..28397475 FT /rpt_family="MIR" FT repeat_region complement(28397492..28397788) FT /rpt_family="AluJb" FT repeat_region 28397804..28397862 FT /rpt_family="AT_rich" FT repeat_region complement(28398002..28398047) FT /rpt_family="(CAT)n" FT repeat_region complement(28398527..28398582) FT /rpt_family="(TA)n" FT repeat_region complement(28398601..28398728) FT /rpt_family="FLAM_C" FT repeat_region 28399181..28399224 FT /rpt_family="AT_rich" FT repeat_region 28399889..28400004 FT /rpt_family="AluJo" FT repeat_region complement(28400875..28400981) FT /rpt_family="(CAGG)n" FT repeat_region complement(28403856..28404135) FT /rpt_family="MER58B" FT repeat_region complement(28404555..28405318) FT /rpt_family="L1MB8" FT repeat_region complement(28405463..28405576) FT /rpt_family="L1" FT repeat_region complement(28405619..28405893) FT /rpt_family="AluJb" FT repeat_region complement(28406002..28406190) FT /rpt_family="L1PA7" FT repeat_region complement(28406210..28406484) FT /rpt_family="L1" FT repeat_region complement(28406485..28406604) FT /rpt_family="L1MA10" FT repeat_region complement(28406754..28407026) FT /rpt_family="L1" FT repeat_region complement(28407024..28407314) FT /rpt_family="L1PA16" FT repeat_region complement(28407918..28407945) FT /rpt_family="AT_rich" FT repeat_region 28408070..28408331 FT /rpt_family="L1MB4" FT repeat_region 28408350..28408417 FT /rpt_family="(CATA)n" FT misc_feature 28409256..28409292 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 72.000" FT misc_feature 28409871..28409955 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 92.000" FT misc_feature 28412232..28412341 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 83.000" FT misc_feature 28412424..28412479 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 55.000" FT repeat_region 28412627..28412905 FT /rpt_family="AluJo" FT repeat_region 28413507..28413587 FT /rpt_family="(GA)n" FT repeat_region complement(28414858..28415149) FT /rpt_family="AluSq" FT repeat_region complement(28415260..28415559) FT /rpt_family="AluSg" FT repeat_region complement(28415638..28415938) FT /rpt_family="AluSq" FT misc_feature 28417982..28418069 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 55.000" FT repeat_region complement(28419478..28419712) FT /rpt_family="AluJo" FT misc_feature 28420038..28420277 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 65.000" FT repeat_region complement(28420283..28420354) FT /rpt_family="(GAAAA)n" FT repeat_region complement(28420805..28420896) FT /rpt_family="POLY_A" FT repeat_region complement(28421012..28421313) FT /rpt_family="THE1B" FT repeat_region 28422626..28422874 FT /rpt_family="LTR4" FT repeat_region 28423364..28423508 FT /rpt_family="LINE2" FT repeat_region complement(28423908..28423947) FT /rpt_family="AT_rich" FT repeat_region complement(28424068..28424092) FT /rpt_family="AT_rich" FT misc_feature complement(28424424..28424581) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 87.000" FT repeat_region complement(28424845..28424914) FT /rpt_family="LINE2" FT repeat_region 28425795..28425904 FT /rpt_family="MIR" FT repeat_region 28425941..28425977 FT /rpt_family="LINE2" FT repeat_region 28426395..28426553 FT /rpt_family="MIR" FT repeat_region 28428684..28428992 FT /rpt_family="AluSx" FT repeat_region complement(28429858..28430156) FT /rpt_family="AluSc" FT repeat_region complement(28430405..28430444) FT /rpt_family="AT_rich" FT repeat_region complement(28430488..28430626) FT /rpt_family="FLAM_A" FT repeat_region complement(28432417..28433064) FT /rpt_family="LINE2" FT repeat_region 28433154..28433376 FT /rpt_family="L1MC/D" FT repeat_region complement(28433403..28434587) FT /rpt_family="L1PA8" FT repeat_region complement(28436244..28440727) FT /rpt_family="L1" FT repeat_region 28440738..28440945 FT /rpt_family="L1PA5" FT repeat_region 28441010..28441308 FT /rpt_family="AluY" FT repeat_region complement(28441899..28442197) FT /rpt_family="AluJo" FT repeat_region 28442255..28442553 FT /rpt_family="AluY" FT misc_feature complement(28444790..28444967) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 77.000" FT repeat_region 28446494..28446827 FT /rpt_family="MER61" FT repeat_region complement(28447956..28448369) FT /rpt_family="MSTA" FT repeat_region 28448978..28449039 FT /rpt_family="(TAGA)n" FT repeat_region complement(28449040..28449200) FT /rpt_family="AluSg/x" FT misc_feature complement(28451635..28451754) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 65.000" FT repeat_region 28451934..28452015 FT /rpt_family="AT_rich" FT repeat_region complement(28452047..28452335) FT /rpt_family="AluSx" FT repeat_region 28452463..28452673 FT /rpt_family="AluJo" FT repeat_region 28455834..28455996 FT /rpt_family="MER5B" FT repeat_region 28456035..28456088 FT /rpt_family="MIR" FT repeat_region complement(28456786..28456813) FT /rpt_family="AT_rich" FT misc_feature 28457047..28457082 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 62.000" FT repeat_region complement(28457334..28457506) FT /rpt_family="MER20" FT repeat_region 28457509..28457646 FT /rpt_family="MER64" FT repeat_region 28457672..28458080 FT /rpt_family="MER64" FT repeat_region complement(28458094..28458718) FT /rpt_family="L1PA15" FT repeat_region 28458726..28459192 FT /rpt_family="MER64" FT repeat_region 28459231..28459275 FT /rpt_family="MER64B" FT repeat_region complement(28459277..28459363) FT /rpt_family="L1P3" FT repeat_region 28459374..28459470 FT /rpt_family="MER64" FT repeat_region complement(28459634..28459706) FT /rpt_family="(TAA)n" FT repeat_region complement(28459742..28459769) FT /rpt_family="AT_rich" FT repeat_region complement(28459770..28460082) FT /rpt_family="AluSg" FT repeat_region complement(28460839..28460960) FT /rpt_family="MER33" FT misc_feature 28461313..28461423 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 89.000" FT repeat_region 28461522..28461826 FT /rpt_family="AluSx" FT repeat_region complement(28462626..28462753) FT /rpt_family="LINE2" FT repeat_region 28462975..28463272 FT /rpt_family="AluJb" FT repeat_region complement(28463424..28464064) FT /rpt_family="LINE2" FT misc_feature 28465605..28465670 FT /note="BLASTX similarity to P34624 (231..252); match: 0.68, FT score: 1.9e-12; database searched: nr; HYPOTHETICAL 63.5 KD FT PROTEIN ZK353.1 IN CHROMOSOME III >pir||S44654 ZK353.1 FT protein - Caenorhabditis elegans >gi|289757" FT misc_feature 28465642..28465770 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 87.000" FT misc_feature 28465649..28465771 FT /note="BLASTX similarity to P34624 (246..286); match: 0.41, FT score: 1.9e-12; database searched: nr; HYPOTHETICAL 63.5 KD FT PROTEIN ZK353.1 IN CHROMOSOME III >pir||S44654 ZK353.1 FT protein - Caenorhabditis elegans >gi|289757" FT misc_feature 28466551..28466641 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 59.000" FT repeat_region 28466867..28468702 FT /rpt_family="L1M3/4" FT repeat_region 28468694..28469445 FT /rpt_family="L1MA3" FT repeat_region 28469568..28470557 FT /rpt_family="L1MA3" FT repeat_region 28470573..28470845 FT /rpt_family="AluY" FT repeat_region complement(28470846..28470867) FT /rpt_family="GC_rich" FT repeat_region 28472180..28472477 FT /rpt_family="AluJo" FT repeat_region complement(28473338..28473377) FT /rpt_family="AT_rich" FT misc_feature 28474319..28474481 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 99.000" FT misc_feature 28474320..28474481 FT /note="BLASTX similarity to P34624 (287..340); match: 0.54, FT score: 5.1e-52; database searched: nr; HYPOTHETICAL 63.5 KD FT PROTEIN ZK353.1 IN CHROMOSOME III >pir||S44654 ZK353.1 FT protein - Caenorhabditis elegans >gi|289757" FT repeat_region complement(28826220..28826398) FT /rpt_family="AluJb" FT repeat_region complement(28826887..28826926) FT /rpt_family="AT_rich" FT misc_feature complement(28827012..28827204) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: excellent, score: 83.000" FT repeat_region 28827752..28828138 FT /rpt_family="L1PA16" FT repeat_region complement(28828784..28829441) FT /rpt_family="L1PA14" FT repeat_region complement(28829442..28829741) FT /rpt_family="AluSc" FT repeat_region complement(28829743..28830600) FT /rpt_family="L1PA14" FT repeat_region 28830613..28830978 FT /rpt_family="MSTA" FT repeat_region complement(28830979..28831652) FT /rpt_family="L1PA14" FT repeat_region complement(28831814..28831898) FT /rpt_family="MIR" FT misc_feature 28832016..28832419 FT /note="BLASTN similarity to AQ227986 (2..405); match: 0.98, FT score: 5.6e-155; database searched: month.na; FT HS_2022_B2_H07_MR CIT Approved Human Genomic Sperm Library FT D Homo sapiens genomic clone Plate=2022 Col=14 Row=P," FT repeat_region complement(28833912..28833933) FT /rpt_family="AT_rich" FT repeat_region 28833938..28834245 FT /rpt_family="AluY" FT repeat_region 28834564..28834681 FT /rpt_family="AluJb" FT repeat_region complement(28834759..28834804) FT /rpt_family="AT_rich" FT misc_feature 28836219..28836333 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 66.000" FT repeat_region 28838205..28838319 FT /rpt_family="(GAAAA)n" FT repeat_region complement(28838666..28838967) FT /rpt_family="AluSx" FT repeat_region 28839154..28839446 FT /rpt_family="AluSq" FT repeat_region 28840171..28840245 FT /rpt_family="L1MC4" FT repeat_region 28840287..28840522 FT /rpt_family="L1MC4" FT repeat_region complement(28840572..28840700) FT /rpt_family="MIR" FT repeat_region complement(28840773..28840832) FT /rpt_family="L1MC2" FT misc_feature 28840947..28841015 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 58.000" FT repeat_region 28842374..28842673 FT /rpt_family="AluSg" FT repeat_region 28843409..28845203 FT /rpt_family="L1M3/4" FT repeat_region 28845225..28845369 FT /rpt_family="(TA)n" FT repeat_region 28845370..28845771 FT /rpt_family="L1" FT repeat_region 28845785..28845910 FT /rpt_family="MLT1A1" FT repeat_region 28845911..28846342 FT /rpt_family="MER1A" FT repeat_region 28846343..28846430 FT /rpt_family="MLT1A1" FT repeat_region 28846431..28847262 FT /rpt_family="L1MA8" FT repeat_region 28847267..28847559 FT /rpt_family="AluSg" FT repeat_region 28847561..28847776 FT /rpt_family="L1MA9" FT repeat_region 28847799..28847956 FT /rpt_family="L1" FT repeat_region complement(28847957..28848317) FT /rpt_family="MLT1B" FT repeat_region 28848348..28848504 FT /rpt_family="L1" FT repeat_region 28848348..28849195 FT /rpt_family="L1MB6" FT repeat_region 28849203..28850285 FT /rpt_family="L1MB6" FT repeat_region 28852024..28852100 FT /rpt_family="(TAAA)n" FT repeat_region complement(28853434..28853526) FT /rpt_family="LINE2" FT repeat_region complement(28853804..28854059) FT /rpt_family="LINE2" FT misc_feature complement(28854052..28854430) FT /note="BLASTN similarity to AQ072052 (1..379); match: 0.98, FT score: 8.3e-145; database searched: month.na; FT HS_3020_A2_E01_T7 CIT Approved Human Genomic Sperm Library FT D Homo sapiens genomic clone Plate=3020 Col=2 Row=I" FT repeat_region complement(28854060..28854600) FT /rpt_family="MLT1F" FT misc_feature complement(28854068..28854464) FT /note="BLASTN similarity to AQ071961 (1..397); match: 0.99, FT score: 2.6e-155; database searched: month.na; FT HS_3020_A2_E01_MR CIT Approved Human Genomic Sperm Library FT D Homo sapiens genomic clone Plate=3020 Col=2 Row=I" FT repeat_region complement(28854604..28854911) FT /rpt_family="LINE2" FT repeat_region 28855008..28855163 FT /rpt_family="(TGGA)n" FT repeat_region 28855813..28856111 FT /rpt_family="AluSx" FT repeat_region complement(28856582..28856616) FT /rpt_family="AT_rich" FT repeat_region complement(28856650..28856787) FT /rpt_family="MIR" FT repeat_region complement(28856835..28857004) FT /rpt_family="MIR" FT misc_feature complement(28857294..28857418) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 52.000" FT repeat_region complement(28857467..28857776) FT /rpt_family="AluJo" FT repeat_region 28858481..28858967 FT /rpt_family="LINE2" FT repeat_region complement(28858970..28859110) FT /rpt_family="(GAAA)n" FT repeat_region complement(28859135..28859410) FT /rpt_family="AluJb" FT repeat_region 28859415..28859468 FT /rpt_family="LINE2" FT repeat_region 28859683..28859817 FT /rpt_family="MIR" FT repeat_region complement(28859927..28860013) FT /rpt_family="MER58B" FT repeat_region complement(28860017..28860084) FT /rpt_family="MER58A" FT repeat_region complement(28860432..28860479) FT /rpt_family="AT_rich" FT repeat_region complement(28860525..28860809) FT /rpt_family="AluSx" FT misc_feature 28861752..28861829 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 52.000" FT repeat_region complement(28861993..28862498) FT /rpt_family="L1PB2" FT repeat_region 28862627..28863027 FT /rpt_family="MSTB" FT repeat_region complement(28863034..28863793) FT /rpt_family="MER21B" FT repeat_region 28864862..28864896 FT /rpt_family="MIR" FT repeat_region 28866508..28866570 FT /rpt_family="(TAA)n" FT repeat_region 28866661..28866966 FT /rpt_family="AluJo" FT repeat_region 28867109..28868033 FT /rpt_family="L1PB3" FT repeat_region complement(28868055..28868083) FT /rpt_family="AT_rich" FT repeat_region complement(28868173..28868439) FT /rpt_family="AluSg" FT repeat_region complement(28868440..28868472) FT /rpt_family="(GAAAA)n" FT repeat_region complement(28868475..28868775) FT /rpt_family="AluSx" FT repeat_region complement(28868791..28868941) FT /rpt_family="L1MA10" FT repeat_region complement(28868984..28869174) FT /rpt_family="L1MB1" FT repeat_region complement(28869211..28869399) FT /rpt_family="MIR" FT repeat_region 28869443..28869541 FT /rpt_family="MER5A" FT repeat_region complement(28869700..28869744) FT /rpt_family="(CA)n" FT repeat_region 28870522..28870669 FT /rpt_family="MIR" FT misc_feature 28870841..28870943 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: excellent, score: 92.000" FT repeat_region 28872499..28872645 FT /rpt_family="MER20" FT repeat_region 28872700..28872871 FT /rpt_family="AluJo" FT misc_feature 28874017..28874092 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 0, quality: good, score: 68.000" FT repeat_region complement(28874152..28874190) FT /rpt_family="(GA)n" FT misc_feature 28875854..28875959 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 50.000" FT repeat_region 28876048..28876213 FT /rpt_family="HERVL" FT repeat_region complement(28876528..28876604) FT /rpt_family="AT_rich" FT repeat_region 28877087..28877401 FT /rpt_family="L1M4" FT repeat_region 28878305..28878563 FT /rpt_family="L1M4" FT repeat_region 28878564..28878660 FT /rpt_family="(CA)n" FT repeat_region 28878727..28879176 FT /rpt_family="L1M4" FT repeat_region complement(28879327..28879558) FT /rpt_family="L1MA6" FT repeat_region 28879559..28879880 FT /rpt_family="MSTB" FT repeat_region complement(28879925..28880392) FT /rpt_family="L1MA6" FT repeat_region 28880392..28880665 FT /rpt_family="L1MA6" FT repeat_region complement(28880681..28880966) FT /rpt_family="AluJb" FT repeat_region 28880972..28881149 FT /rpt_family="L1MA7" FT repeat_region complement(28881240..28881750) FT /rpt_family="LINE2" FT repeat_region complement(28881751..28882051) FT /rpt_family="AluSx" FT repeat_region complement(28882052..28882117) FT /rpt_family="LINE2" FT repeat_region complement(28882675..28882968) FT /rpt_family="AluSq" FT repeat_region complement(28883374..28883405) FT /rpt_family="(CAAAA)n" FT repeat_region 28883536..28883671 FT /rpt_family="AluSq/x" FT repeat_region 28883672..28883972 FT /rpt_family="AluSx" FT repeat_region 28883990..28884117 FT /rpt_family="FLAM_A" FT repeat_region 28884875..28885172 FT /rpt_family="MER4D" FT repeat_region complement(28885511..28885575) FT /rpt_family="MIR" FT repeat_region complement(28889594..28889888) FT /rpt_family="AluSx" FT repeat_region complement(28889890..28889930) FT /rpt_family="AT_rich" FT repeat_region complement(28889957..28890331) FT /rpt_family="L1PA16" FT repeat_region 28890670..28890697 FT /rpt_family="(CA)n" FT repeat_region 28890706..28890741 FT /rpt_family="LINE2" FT repeat_region complement(28891586..28891819) FT /rpt_family="MIR" FT misc_feature complement(28892100..28892206) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 66.000" FT repeat_region 28892767..28892791 FT /rpt_family="(CAA)n" FT repeat_region 28894417..28895018 FT /rpt_family="LINE2" FT repeat_region complement(28895377..28895833) FT /rpt_family="MER4C" FT misc_feature 28895833..28896051 FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 71.000" FT misc_feature 28896633..28896814 FT /note="BLASTN similarity to Z61583 (1..183); match: 0.97, FT score: 2.7e-62; database searched: nt; H.sapiens CpG DNA, FT clone 54e4, reverse read cpg54e4.rt1a ." FT misc_feature complement(28896708..28896860) FT /note="BLASTN similarity to Z61582 (1..153); match: 0.99, FT score: 3.5e-54; database searched: nt; H.sapiens CpG DNA, FT clone 54e4, forward read cpg54e4.ft1a ." FT repeat_region 28897026..28897083 FT /rpt_family="(CA)n" FT repeat_region complement(28897628..28897762) FT /rpt_family="(GA)n" FT repeat_region 28898421..28898941 FT /rpt_family="L1MB2" FT repeat_region 28899623..28899737 FT /rpt_family="AluY" FT misc_feature complement(28899749..28899892) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 52.000" FT repeat_region complement(28900243..28900399) FT /rpt_family="L1PA10" FT repeat_region complement(28900516..28900554) FT /rpt_family="(CA)n" FT repeat_region 28901254..28901346 FT /rpt_family="MIR" FT repeat_region 28901954..28902156 FT /rpt_family="MER3" FT misc_feature complement(28903634..28903753) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: good, score: 60.000" FT repeat_region 28904045..28904174 FT /rpt_family="LINE2" FT repeat_region complement(28904727..28905025) FT /rpt_family="AluSg1" FT repeat_region complement(28905130..28906317) FT /rpt_family="L1MA2" FT repeat_region complement(28906318..28906543) FT /rpt_family="L1M3/4" FT repeat_region complement(28906547..28906834) FT /rpt_family="AluSx" FT repeat_region complement(28906850..28909114) FT /rpt_family="L1M3/4" FT misc_feature complement(28909414..28909631) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 2, quality: good, score: 64.000" FT repeat_region 28909901..28910191 FT /rpt_family="AluJo" FT misc_feature complement(28910747..28910818) FT /note="predicted exon, program: grail2exons_human_1.3, FT frame: 1, quality: excellent, score: 90.000" FT repeat_region complement(28910973..28911291) FT /rpt_family="AluJo" FT misc_feature