ID CM000675; SV 1; linear; genomic DNA; CON; HUM; 115169878 BP. XX AC CM000675; XX PR Project:PRJNA31257; XX DT 09-MAR-2009 (Rel. 100, Created) DT 29-SEP-2009 (Rel. 102, Last updated, Version 2) XX DE Homo sapiens chromosome 13, GRCh37 primary reference assembly. XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RC Erratum:[Nature 2001 Aug 2;412(6846):565] RP 1-115169878 RX DOI; 10.1038/35057062. RX PUBMED; 11237011. RG International Human Genome Sequencing Consortium RA Lander E.S., Linton L.M., Birren B., Nusbaum C., Zody M.C., Baldwin J., RA Devon K., Dewar K., Doyle M., FitzHugh W., Funke R., Gage D., Harris K., RA Heaford A., Howland J., Kann L., Lehoczky J., LeVine R., McEwan P., RA McKernan K., Meldrim J., Mesirov J.P., Miranda C., Morris W., Naylor J., RA Raymond C., Rosetti M., Santos R., Sheridan A., Sougnez C., RA Stange-Thomann N., Stojanovic N., Subramanian A., Wyman D., Rogers J., RA Sulston J., Ainscough R., Beck S., Bentley D., Burton J., Clee C., RA Carter N., Coulson A., Deadman R., Deloukas P., Dunham A., Dunham I., RA Durbin R., French L., Grafham D., Gregory S., Hubbard T., Humphray S., RA Hunt A., Jones M., Lloyd C., McMurray A., Matthews L., Mercer S., Milne S., RA Mullikin J.C., Mungall A., Plumb R., Ross M., Shownkeen R., Sims S., RA Waterston R.H., Wilson R.K., Hillier L.W., McPherson J.D., Marra M.A., RA Mardis E.R., Fulton L.A., Chinwalla A.T., Pepin K.H., Gish W.R., RA Chissoe S.L., Wendl M.C., Delehaunty K.D., Miner T.L., Delehaunty A., RA Kramer J.B., Cook L.L., Fulton R.S., Johnson D.L., Minx P.J., Clifton S.W., RA Hawkins T., Branscomb E., Predki P., Richardson P., Wenning S., Slezak T., RA Doggett N., Cheng J.F., Olsen A., Lucas S., Elkin C., Uberbacher E., RA Frazier M., Gibbs R.A., Muzny D.M., Scherer S.E., Bouck J.B., RA Sodergren E.J., Worley K.C., Rives C.M., Gorrell J.H., Metzker M.L., RA Naylor S.L., Kucherlapati R.S., Nelson D.L., Weinstock G.M., Sakaki Y., RA Fujiyama A., Hattori M., Yada T., Toyoda A., Itoh T., Kawagoe C., RA Watanabe H., Totoki Y., Taylor T., Weissenbach J., Heilig R., Saurin W., RA Artiguenave F., Brottier P., Bruls T., Pelletier E., Robert C., Wincker P., RA Smith D.R., Doucette-Stamm L., Rubenfield M., Weinstock K., Lee H.M., RA Dubois J., Rosenthal A., Platzer M., Nyakatura G., Taudien S., Rump A., RA Yang H., Yu J., Wang J., Huang G., Gu J., Hood L., Rowen L., Madan A., RA Qin S., Davis R.W., Federspiel N.A., Abola A.P., Proctor M.J., Myers R.M., RA Schmutz J., Dickson M., Grimwood J., Cox D.R., Olson M.V., Kaul R., RA Raymond C., Shimizu N., Kawasaki K., Minoshima S., Evans G.A., RA Athanasiou M., Schultz R., Roe B.A., Chen F., Pan H., Ramser J., RA Lehrach H., Reinhardt R., McCombie W.R., de la Bastide M., Dedhia N., RA Blocker H., Hornischer K., Nordsiek G., Agarwala R., Aravind L., RA Bailey J.A., Bateman A., Batzoglou S., Birney E., Bork P., Brown D.G., RA Burge C.B., Cerutti L., Chen H.C., Church D., Clamp M., Copley R.R., RA Doerks T., Eddy S.R., Eichler E.E., Furey T.S., Galagan J., Gilbert J.G., RA Harmon C., Hayashizaki Y., Haussler D., Hermjakob H., Hokamp K., Jang W., RA Johnson L.S., Jones T.A., Kasif S., Kaspryzk A., Kennedy S., Kent W.J., RA Kitts P., Koonin E.V., Korf I., Kulp D., Lancet D., Lowe T.M., RA McLysaght A., Mikkelsen T., Moran J.V., Mulder N., Pollara V.J., RA Ponting C.P., Schuler G., Schultz J., Slater G., Smit A.F., Stupka E., RA Szustakowski J., Thierry-Mieg D., Thierry-Mieg J., Wagner L., Wallis J., RA Wheeler R., Williams A., Wolf Y.I., Wolfe K.H., Yang S.P., Yeh R.F., RA Collins F., Guyer M.S., Peterson J., Felsenfeld A., Wetterstrand K.A., RA Patrinos A., Morgan M.J., de Jong P., Catanese J.J., Osoegawa K., RA Shizuya H., Choi S., Chen Y.J.; RT "Initial sequencing and analysis of the human genome"; RL Nature 409(6822):860-921(2001). XX RN [2] RP 1-115169878 RX DOI; 10.1038/nature02379. RX PUBMED; 15057823. RA Dunham A., Matthews L.H., Burton J., Ashurst J.L., Howe K.L., RA Ashcroft K.J., Beare D.M., Burford D.C., Hunt S.E., Griffiths-Jones S., RA Jones M.C., Keenan S.J., Oliver K., Scott C.E., Ainscough R., Almeida J.P., RA Ambrose K.D., Andrews D.T., Ashwell R.I., Babbage A.K., Bagguley C.L., RA Bailey J., Bannerjee R., Barlow K.F., Bates K., Beasley H., Bird C.P., RA Bray-Allen S., Brown A.J., Brown J.Y., Burrill W., Carder C., Carter N.P., RA Chapman J.C., Clamp M.E., Clark S.Y., Clarke G., Clee C.M., Clegg S.C., RA Cobley V., Collins J.E., Corby N., Coville G.J., Deloukas P., Dhami P., RA Dunham I., Dunn M., Earthrowl M.E., Ellington A.G., Faulkner L., RA Frankish A.G., Frankland J., French L., Garner P., Garnett J., RA Gilbert J.G., Gilson C.J., Ghori J., Grafham D.V., Gribble S.M., RA Griffiths C., Hall R.E., Hammond S., Harley J.L., Hart E.A., Heath P.D., RA Howden P.J., Huckle E.J., Hunt P.J., Hunt A.R., Johnson C., Johnson D., RA Kay M., Kimberley A.M., King A., Laird G.K., Langford C.J., Lawlor S., RA Leongamornlert D.A., Lloyd D.M., Lloyd C., Loveland J.E., Lovell J., RA Martin S., Mashreghi-Mohammadi M., McLaren S.J., McMurray A., Milne S., RA Moore M.J., Nickerson T., Palmer S.A., Pearce A.V., Peck A.I., Pelan S., RA Phillimore B., Porter K.M., Rice C.M., Searle S., Sehra H.K., Shownkeen R., RA Skuce C.D., Smith M., Steward C.A., Sycamore N., Tester J., Thomas D.W., RA Tracey A., Tromans A., Tubby B., Wall M., Wallis J.M., West A.P., RA Whitehead S.L., Willey D.L., Wilming L., Wray P.W., Wright M.W., Young L., RA Coulson A., Durbin R., Hubbard T., Sulston J.E., Beck S., Bentley D.R., RA Rogers J., Ross M.T.; RT "The DNA sequence and analysis of human chromosome 13"; RL Nature 428(6982):522-528(2004). XX RN [3] RP 1-115169878 RX DOI; 10.1038/nature03001. RX PUBMED; 15496913. RG International Human Genome Sequencing Consortium RA ; RT "Finishing the euchromatic sequence of the human genome"; RL Nature 431(7011):931-945(2004). XX RN [4] RP 1-115169878 RG Genome Reference Consortium RA ; RT ; RL Submitted (24-FEB-2009) to the INSDC. RL NCBI, NIH, Bethesda, MD 20892, USA XX CC The DNA sequence is composed of genomic sequence, primarily CC finished clones that were sequenced as part of the Human Genome CC Project. PCR products and WGS shotgun sequence have been added CC where necessary to fill gaps or correct errors. All such additions CC are manually curated by GRC staff. For more information see: CC http://genomereference.org. XX CO join(gap(10000),gap(15990000),gap(3000000),gap(20000), CO GL000111.1:1..67740324,gap(150000),GL000112.1:1..25443670,gap(150000), CO GL000113.1:1..1821999,gap(100000),GL000114.1:1..213955,gap(100000), CO GL000115.1:1..369930,gap(50000),gap(10000)) XX FH Key Location/Qualifiers FH FT source 1..115169878 FT /organism="Homo sapiens" FT /chromosome="13" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT gap 1..10000 FT /estimated_length=10000 FT gap 10001..16000000 FT /estimated_length=15990000 FT gap 16000001..19000000 FT /estimated_length=3000000 FT gap 19000001..19020000 FT /estimated_length=20000 FT misc_feature 19020001..19181183 FT /note="annotated region of clone" FT misc_feature 19020001 FT /note="Clone_left_end: RP11-77P19" FT CDS complement(join(19041312..19044117,19044312..19044342, FT 19055145..19055259,19058871..19058943,19059474..19059588)) FT /pseudo FT /locus_tag="RP11-77P19.1-001" FT /product="novel zinc finger protein pseudogene" FT /note="match: proteins: Sw:O14628 Sw:O43345 Sw:O95780 FT Sw:P16373 Sw:P35789 Sw:Q03936 Sw:Q03938 Sw:Q96JC4 Sw:Q9P255 FT Sw:Q9UII5 Tr:O95779 Tr:Q02313 Tr:Q8TD23 Tr:Q96N22" FT misc_feature 19110623 FT /note="Clone_left_end: RP11-484H12" FT mRNA join(19114637..19115069,19124430..19124837) FT /locus_tag="RP11-77P19.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM675505 Em:BM931437" FT polyA_signal 19124816..19124821 FT polyA_site 19124837 FT mRNA join(19174124..19174259,AL359737.16:8190..8469) FT /locus_tag="RP11-484H12.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA399074" FT misc_feature 19181183 FT /note="Clone_right_end: RP11-77P19" FT misc_feature 19181184..19272490 FT /note="annotated region of clone" FT misc_feature 19183269..19183314 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS 19183272..19183842 FT /pseudo FT /locus_tag="RP11-484H12.2-001" FT /product="novel pseudogene" FT misc_feature 19183316..19183324 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 19183326..19183337 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 19183339..19183342 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 19183344..19183574 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA complement(join(19184438..19184994,19185710..19185815)) FT /locus_tag="RP11-484H12.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM701320 Em:BM715986" FT CDS 19239375..19241361 FT /pseudo FT /locus_tag="RP11-484H12.4-001" FT /product="feminization 1 homolog a (FEM1A) (KIAA1785) FT pseudogene" FT /note="match: proteins: Sw:P17221 Tr:Q8T4I2 Tr:Q96JP0 FT Tr:Q9BSK4 Tr:Q9DBC6 Tr:Q9I7J2 Tr:Q9NPL6 Tr:Q9VFD5 FT Tr:Q9Z2G1" FT polyA_signal 19243059..19243064 FT mRNA join(19246967..19247248,19250128..19250303) FT /locus_tag="RP11-484H12.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI656938 Em:AI917192 Em:BE466698" FT CDS 19254634..19255840 FT /pseudo FT /locus_tag="RP11-484H12.6-001" FT /product="telomeric repeat binding factor FT (NIMA-interacting) 1 (TERF1) pseudogene" FT /note="match: proteins: Sw:O35144 Sw:O55036 Sw:P54274 FT Sw:P54274 Sw:P70371 Sw:P70371 Sw:Q12955 Sw:Q15554 Sw:Q15554 FT Sw:Q9PU53" FT misc_feature 19268491 FT /note="Clone_left_end: RP11-38M15" FT CDS 19271143..19271647 FT /pseudo FT /locus_tag="RP11-484H12.7-001" FT /product="chromosome 21 open reading frame 70 (C21orf70) FT pseudogene" FT /note="match: proteins: Sw:P58468 Sw:Q9NSI2" FT mRNA join(AL138715.11:154124..154259,19187373..19187652) FT /locus_tag="RP11-484H12.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA399074" FT misc_feature 19272491..19456948 FT /note="annotated region of clone" FT misc_feature 19276808 FT /note="Clone_right_end: RP11-484H12" FT mRNA complement(join(19292907..19293290,19293824..19293869)) FT /locus_tag="RP11-38M15.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA621750" FT CDS complement(19298711..19299527) FT /pseudo FT /locus_tag="RP11-38M15.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q96BH4 Tr:Q9VBY3" FT CDS 19300846..19301554 FT /pseudo FT /locus_tag="RP11-38M15.4-001" FT /product="calponin 3, acidic (CNN3) pseudogene" FT /note="match: proteins: Sw:P26932 Sw:P37397 Sw:P37802 FT Sw:P51911 Sw:Q08091 Sw:Q08092 Sw:Q08290 Sw:Q15417 Sw:Q9R1Q8 FT Sw:Q9UI15 Sw:Q9WVA4 Tr:O93547 Tr:Q8VHH3 Tr:Q91VU2" FT CDS 19308220..19309036 FT /pseudo FT /locus_tag="RP11-38M15.5-001" FT /product="zinc finger protein 267 (ZNF267) pseudogene" FT /note="match: proteins: Sw:O95780 Sw:P17032 Sw:P17036 FT Sw:P18716 Sw:P18745 Sw:P24399 Sw:Q14586 Sw:Q8NDW4 Sw:Q96NI8 FT Sw:Q99MD8 Sw:Q9ERU2 Sw:Q9ERU3 Sw:Q9HBT7 Sw:Q9NR11 Sw:Q9UIE0 FT Sw:Q9Z1D8 Tr:O95779 Tr:Q62512 Tr:Q8TF23 Tr:Q9CZ86 Tr:Q9D364 FT Tr:Q9EQK4 Tr:Q9HD74 Tr:Q9R162 Tr:Q9Z116" FT polyA_site complement(19312245) FT polyA_signal complement(19312263..19312268) FT CDS complement(join(19315870..19315991,19316174..19316234, FT 19316561..19316858)) FT /pseudo FT /locus_tag="RP11-38M15.7-001" FT /product="pseudogene similar to part of cytochrome P450, FT family 4, subfamily F CYP4F" FT /note="match: proteins: Sw:P51870 Sw:P51871 Sw:P98187 FT Sw:Q08477 Sw:Q9EP75 Sw:Q9HCS2 Tr:O60389 Tr:Q9D793 FT Tr:Q9EQ70" FT mRNA complement(join(19312245..19312543,19313133..19313243, FT 19314113..19314382,19315124..19315252,19315870..19316060, FT 19317199..19317477)) FT /locus_tag="RP11-38M15.6-001" FT /product="novel transcript similar to chromosome 21 open FT reading frame 15 C21orf15" FT /note="match: cDNAs: Em:AY040090" FT /note="match: ESTs: Em:AA915976 Em:AI033019 Em:AI145105 FT Em:AI261513 Em:AI372769 Em:AJ003450" FT CDS complement(19381419..19382158) FT /pseudo FT /locus_tag="RP11-38M15.8-001" FT /product="pseudogene similar to part of sorting nexin FT associated golgi protein 1 SNAG1" FT /note="match: proteins: Sw:Q91ZR2 Sw:Q96RF0" FT CDS 19383970..19384188 FT /pseudo FT /locus_tag="RP11-38M15.9-001" FT /product="melanoma antigen pseudogene" FT /note="match: proteins: Tr:Q9UMX8" FT CDS complement(19411908..19412238) FT /pseudo FT /locus_tag="RP11-38M15.12-001" FT /product="ras homolog gene family, member T1 (RHOT1) FT pseudogene" FT /note="match: proteins: Sw:Q5E9M9 Sw:Q8BG51 Sw:Q8IXI1 FT Sw:Q8IXI2" FT mRNA join(19433967..19434159,19434587..19434882) FT /locus_tag="RP11-38M15.11-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI656933 Em:BE503472" FT CDS complement(join(19390858..19391086,19392414..19392593, FT 19393180..19393504,19400806..19400935,19402962..19403071, FT 19407857..19407989,19409525..19409909,19412409..19412941, FT 19414117..19414297,19415734..19415853,19419883..19419953, FT 19425912..19425984,19426077..19426105,19428917..19429002, FT 19432944..19433013,19435654..19435684,19442225..19442273, FT 19444808..19444943,19446001..19446107)) FT /pseudo FT /locus_tag="RP11-38M15.10-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q5TYW2 Sw:Q9BXX3 Sw:Q9H560 FT Sw:Q9UPS8 Tr:O60311 Tr:Q96LT0" FT misc_feature 19448588 FT /note="Clone_left_end: RP11-442J17" FT misc_feature 19454948 FT /note="Clone_right_end: RP11-38M15" FT misc_feature 19456949..19550773 FT /note="annotated region of clone" FT CDS complement(19466400..19469370) FT /pseudo FT /locus_tag="RP11-442J17.1-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q92543 Tr:Q99KI8" FT mRNA join(19479579..19479716,19480167..19480250, FT 19480637..19480798,19481775..19481950) FT /locus_tag="RP11-442J17.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG722014" FT mRNA join(19496029..19496549,19497681..19497905) FT /locus_tag="RP11-442J17.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG222051" FT misc_feature 19515703..19515706 FT /note="Sequence from AC015873 sequenced by WIBR" FT mRNA complement(join(19521042..19521134,19525810..19525969, FT 19526661..19526727)) FT /locus_tag="RP11-442J17.4-002" FT /product="centromere protein I (CENPI) pseudogene" FT /note="match: ESTs: Em:DV080080.1" FT mRNA complement(join(19520895..19521134,19525810..19525969, FT 19526661..19526731,19526855..19527033,19529068..19529183, FT 19529677..19529796,19532166..19532557,19533133..19533212, FT 19534236..19534334,19536124..19536229,19536698..19536785, FT 19538089..19538247,19539344..19539435, FT AL137001.23:71457..71570,AL137001.23:72037..72124, FT AL137001.23:73426..73587,AL137001.23:74628..74812, FT AL137001.23:76378..76494,AL137001.23:79870..80038, FT AL137001.23:86058..86185)) FT /locus_tag="RP11-442J17.4-001" FT /product="centromere protein I (CENPI) pseudogene" FT misc_feature 19550574 FT /note="Clone_left_end: RP11-301J16" FT misc_feature 19550774..19702992 FT /note="annotated region of clone" FT mRNA join(19582399..19583279,19583414..19583583, FT 19585573..19585704,19585820..19586699) FT /locus_tag="RP11-301J16.5-003" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC047425.1" FT mRNA join(19582404..19583279,19583443..19583583, FT 19585573..19586727,19589222..19589338) FT /locus_tag="RP11-301J16.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF966214 Em:BG723657 Em:BG772215 FT Em:BI462681" FT /note="match: cDNAs: Em:AB070179" FT CDS complement(join(19589627..19589828,19591328..19591462, FT 19592294..19592418,19592758..19592971,19593374..19593476)) FT /pseudo FT /locus_tag="RP11-301J16.3-001" FT /product="pseudogene similar to part of ubiquitin specific FT protease 24 USP24" FT /note="match: proteins: Sw:Q9UPU5" FT mRNA join(19601977..19602048,19602715..19602841) FT /locus_tag="RP11-301J16.7-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA910764" FT misc_feature 19604564 FT /note="Clone_right_end: RP11-442J17" FT mRNA complement(join(<19600141..19600171,19600343..19600527, FT 19600992..19601125,19606623..>19606766)) FT /locus_tag="RP11-301J16.2-001" FT /product="novel protein similar to general transcription FT factor II, i GTF2I" FT /note="match: ESTs: Em:AA872204 Em:AI803060 Em:AI871128 FT Em:AW058661 Em:AW957837 Em:BE746455 Em:BI692891 FT Em:BM551507" FT /note="match: cDNAs: Em:AF015553 Em:AF035737 Em:AF038967 FT Em:AF038968 Em:AF038969 Em:AF043219 Em:AF043220 Em:BC004472 FT Em:U77948 Em:Y14946" FT CDS complement(join(<19600141..19600171,19600343..19600527, FT 19600992..19601125,19606623..>19606766)) FT /codon_start=3 FT /locus_tag="RP11-301J16.2-001" FT /standard_name="OTTHUMP00000018069" FT /product="novel protein similar to general transcription FT factor II, i GTF2I" FT /note="match: proteins: Sw:P78347 Sw:Q9ESZ8 Tr:Q99NI3" FT /protein_id="CAI13228.1" FT /translation="LKNWPSLRPKWPASQSIKQISLPLELKDRGHNFFSTRKDFQTDFV FT KYCVEEEKRLQRCIKMKSTTQVNQMSVDAVEVATLGKTVEDYFCFCYGKALQKPTEVPV FT PYEKMRQDQSALIVQGLPEDVAFKHPENYDLATLKWILENTAGISFIIKRSFLEPKKHL FT G" FT mRNA complement(join(AL355516.12:64047..64286, FT AL355516.12:68962..69121,AL355516.12:69813..69883, FT AL355516.12:70007..70185,AL355516.12:72220..72335, FT AL355516.12:72829..72948,AL355516.12:75318..75709, FT AL355516.12:76285..76364,AL355516.12:77388..77486, FT AL355516.12:79276..79381,AL355516.12:79850..79937, FT AL355516.12:81241..81399,AL355516.12:82496..82587, FT 19622130..19622243,19622710..19622797,19624099..19624260, FT 19625301..19625485,19627051..19627167,19630543..19630711, FT 19636731..19636858)) FT /locus_tag="RP11-442J17.4-001" FT /product="centromere protein I (CENPI) pseudogene" FT misc_feature 19642019..19642331 FT /note="Sequence from clone PCR only" FT misc_feature 19642332 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 430bp by restriction digest data" FT CDS join(19700539..19700754,19701074..19701154, FT 19701908..19702010,AL139327.18:2174..2265, FT AL139327.18:4440..4557,AL139327.18:4640..4731, FT AL139327.18:12560..12759) FT /pseudo FT /locus_tag="RP11-408E5.1-001" FT /product="centromere protein I (CENPI) pseudogene" FT /note="match: proteins: Sw:Q63517 Sw:Q92674" FT misc_feature 19700893 FT /note="Clone_left_end: RP11-408E5" FT misc_feature 19702993..19850551 FT /note="annotated region of clone" FT polyA_site complement(19725406) FT polyA_signal complement(19725419..19725424) FT CDS complement(join(19725694..19725808,19726018..19726093, FT 19726174..19726225,19726312..19726447)) FT /pseudo FT /locus_tag="RP11-408E5.6-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q96AQ1 Tr:Q96LY2" FT CDS complement(join(19726707..19726821,19726981..19727124, FT 19727269..19727395,19727657..19727832,19728204..19728304, FT 19728778..19728868,19729477..19729622,19736179..19736250, FT 19740105..19740237,19744054..19744203,19744328..19744380, FT 19744487..19744593,19744963..19745038,19745192..19745334)) FT /pseudo FT /locus_tag="RP11-408E5.3-001" FT /product="sphingomyelin phosphodiesterase 4, neutral FT membrane (neutral sphingomyelinase-3) (SMPD4) pseudogene" FT /note="match: proteins: Tr:Q95LS9 Tr:Q9CX74 Tr:Q9H0M2 FT Tr:Q9NW20 Tr:Q9NWL2 Tr:Q9NXE4 Tr:Q9P2C9" FT polyA_site complement(19747910) FT polyA_site complement(19747912) FT polyA_signal complement(19747930..19747935) FT mRNA complement(join(19751175..19751500,19752386..19752534, FT 19753103..19753151)) FT /gene="TUBA3C" FT /locus_tag="RP11-408E5.2-001" FT /product="tubulin, alpha 3c" FT /note="match: ESTs: Em:AA697392 Em:BE798061" FT mRNA complement(join(19751483..19751747,19752386..19752534, FT 19753103..19753151)) FT /gene="TUBA3C" FT /locus_tag="RP11-408E5.2-005" FT /product="tubulin, alpha 3c" FT /note="match: ESTs: Em:BI596415" FT mRNA complement(join(19748056..19748299,19753481..19753704)) FT /gene="TUBA3C" FT /locus_tag="RP11-408E5.2-003" FT /product="tubulin, alpha 3c" FT /note="match: ESTs: Em:BM012564" FT mRNA complement(join(19751149..19751602,19752386..19752534, FT 19753481..19753703)) FT /gene="TUBA3C" FT /locus_tag="RP11-408E5.2-004" FT /product="tubulin, alpha 3c" FT /note="match: ESTs: Em:BI414261" FT mRNA complement(join(19747910..19748299,19751067..19751747, FT 19752386..19752534,19753481..19753703,19755885..19755992)) FT /gene="TUBA3C" FT /locus_tag="RP11-408E5.2-002" FT /product="tubulin, alpha 3c" FT /note="match: ESTs: Em:BY794953.2 Em:DB026664.1" FT /note="match: cDNAs: Em:AB178991.1 Em:BC057810.1" FT CDS complement(join(19748003..19748299,19751067..19751747, FT 19752386..19752534,19753481..19753703,19755885..19755887)) FT /gene="TUBA3C" FT /locus_tag="RP11-408E5.2-002" FT /standard_name="OTTHUMP00000018071" FT /product="tubulin, alpha 3c" FT /note="match: proteins: Sw:P05214.1 Sw:Q13748.3 Sw:Q32KN8.1 FT Sw:Q68FR8.1 Tr:Q1ZYQ1.1 Tr:Q4R4C4.1 Tr:Q5FW91.1 FT Tr:Q7PSI5.2" FT /protein_id="CAH73534.1" FT /translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGG FT DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYA FT RGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGK FT KSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP FT TYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA FT YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRT FT IQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY FT AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEAEAEEGEEY" FT mRNA join(19759362..19759482,19761260..19761504, FT 19761601..19761644) FT /locus_tag="RP11-408E5.4-001" FT /product="novel protein similar to DMPK-like CDC42-binding FT protein kinase beta CDC42BPB" FT /note="match: ESTs: Em:AI832126.1 Em:AW177973.1" FT /note="match: cDNAs: Em:AB032950 Em:AF021936 Em:AF128625" FT CDS join(19759450..19759482,19761260..19761466) FT /locus_tag="RP11-408E5.4-001" FT /standard_name="OTTHUMP00000018070" FT /product="novel protein similar to DMPK-like CDC42-binding FT protein kinase beta CDC42BPB" FT /note="match: proteins: Sw:O54874 Sw:Q7TT49 Sw:Q9Y5S2" FT /protein_id="CAC12715.1" FT /translation="MVWQENEDLRKQLVEASELLKSQAKELKDAHQQQKLALQDFLELC FT ELVAELCSQKQKVWDKEGEMEVAMQKVNTMWQES" FT CDS complement(join(19775777..19775962,19778480..19778649, FT 19782623..19782680,19793850..19793915,19801388..19801572)) FT /pseudo FT /locus_tag="RP11-408E5.7-001" FT /product="paraspeckle component 1 (PSPC1) pseudogene" FT /note="match: proteins: Tr:Q8R326 Tr:Q8WXF1 Tr:Q9CYH1" FT misc_feature 19829445 FT /note="Clone_left_end: RP11-385E5" FT polyA_site complement(19836937) FT mRNA complement(19836937..19837285) FT /locus_tag="RP11-408E5.5-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AA994611.1 Em:AI215068.1" FT /note="match: cDNAs: Em:AB021644 Em:AB028997 Em:AF172850 FT Em:AL137351" FT polyA_site complement(19836940) FT polyA_signal complement(19836956..19836961) FT mRNA complement(join(19836937..19837171,19837350..19837423, FT 19837923..19838013)) FT /locus_tag="RP11-408E5.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA994611.1 Em:AI215068.1" FT /note="match: cDNAs: Em:AB021644 Em:AB028997 Em:AF172850 FT Em:AL137351" FT misc_feature 19848551 FT /note="Clone_right_end: RP11-408E5" FT CDS join(AL137001.23:149866..150081,AL137001.23:150401..150481, FT AL137001.23:151235..151337,19703166..19703257, FT 19705432..19705549,19705632..19705723,19713552..19713751) FT /pseudo FT /locus_tag="RP11-408E5.1-001" FT /product="centromere protein I (CENPI) pseudogene" FT /note="match: proteins: Sw:Q63517 Sw:Q92674" FT misc_feature 19850552..19990328 FT /note="annotated region of clone" FT CDS complement(19878733..19879765) FT /pseudo FT /locus_tag="RP11-385E5.1-001" FT /product="mitochondrial ribosomal protein L3 (MRPL3) FT pseudogene" FT /note="match: proteins: Sw:P09001 Sw:P18665 Sw:Q99N95 FT Tr:Q91XB2" FT CDS complement(join(19864733..19864890,19866287..19867211, FT 19868678..19868815,19869341..19869524,19870775..19870990, FT 19883782..19883922,19888851..19888889,19891027..19891194, FT 19895513..19895679,19903678..19903748,19907539..19907611, FT 19908329..19908393,19910215..19910293,19913597..19913669, FT 19918715..19918965)) FT /pseudo FT /locus_tag="RP11-385E5.8-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q9UPS8 Tr:Q15694 Tr:Q8WP26 FT Tr:Q9HCD1" FT mRNA join(19919189..19919357,19920005..19920889) FT /locus_tag="RP11-385E5.4-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:BC022083" FT /note="match: ESTs: Em:BG721183" FT polyA_signal 19920865..19920870 FT polyA_site 19920889 FT CDS join(19923276..19923341,19924288..19924363, FT 19925468..19925581,19931574..19931711,19933429..19933524, FT 19940708..19940858,19941202..19941286,19943675..19943797, FT 19948055..19948117,19949123..19949254,19950358..19950445, FT 19953007..19953115,19955325..19955491,19955747..19955828, FT 19960114..19960194,19961170..19961265,19961883..19962005, FT 19968222..19968455,19968779..19969604,19971971..19972070, FT 19976589..19976720,19981910..19982102) FT /pseudo FT /locus_tag="RP11-385E5.2-001" FT /product="ADP-ribosyltransferase (NAD+; poly (ADP-ribose) FT polymerase)-like 1 (ADPRTL1) pseudogene" FT /note="match: proteins: Sw:Q9UKK3" FT CDS 19956594..19957212 FT /pseudo FT /locus_tag="RP11-385E5.3-001" FT /product="family with sequence similarity 58, member A FT (FAM58A) pseudogene" FT /note="match: proteins: Sw:O75909 Sw:O88874 Sw:Q52KE7 FT Sw:Q9R1Q2 Sw:Q9UK58 Tr:Q961D1 Tr:Q961G6 Tr:Q9AS36 Tr:Q9C8P7 FT Tr:Q9FKE6 Tr:Q9VE72" FT mRNA complement(join(19978749..19978942,19979154..19979239)) FT /locus_tag="RP11-385E5.7-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI525526" FT polyA_site complement(19982182) FT polyA_signal complement(19982199..19982204) FT mRNA complement(join(19982182..19983076,19983506..19983669)) FT /locus_tag="RP11-385E5.5-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:BC017420" FT /note="match: ESTs: Em:BG527679" FT CDS join(19985371..19985424,19989409..19989571, FT 19990208..19990328) FT /pseudo FT /locus_tag="RP11-385E5.6-001" FT /product="solute carrier family 25 (mitochondrial carrier; FT ornithine transporter) member 15 (SLC25A15) pseudogene" FT /note="match: proteins: Sw:Q9BXI2 Sw:Q9WVD5 Sw:Q9Y619 FT Tr:Q99ML6" FT misc_feature 19990329..20109658 FT /note="annotated region of clone" FT mRNA complement(join(19997192..19997304,19999087..19999157, FT 20000565..20000657,20004608..20004687,20006613..20006718, FT 20010366..20010446,20012232..20012293,20024216..20024304, FT 20024403..20024484,20025305..20025365,20038596..20038660, FT 20039395..20039458,20039605..20039704,20048054..20048215, FT 20066990..20067043,20067588..20067641,20077364..20077417, FT AL359457.12:1178..1344)) FT /gene="TPTE2" FT /locus_tag="RP11-408K19.2-003" FT /product="transmembrane phosphoinositide 3-phosphatase and FT tensin homolog 2" FT /note="match: cDNAs: Em:AJ421032.1" FT misc_feature 19992328 FT /note="Clone_right_end: RP11-385E5" FT polyA_site complement(19997017) FT polyA_signal complement(19997032..19997037) FT polyA_signal complement(20031932..20031937) FT CDS complement(20032538..20032858) FT /pseudo FT /locus_tag="RP11-408K19.3-001" FT /product="cytochrome c, somatic (CYCS) pseudogene" FT /note="match: proteins: Sw:P00008 Sw:P00011 Sw:P00013 FT Sw:P00015 Sw:P00067 Sw:P00069 Sw:P00070 Sw:P15451 Sw:P62896 FT Sw:P62898 Sw:P68098 Sw:P92504 Sw:P99999 Tr:Q56A15 Tr:Q98BN4 FT Tr:Q9TVZ0 Tr:Q9ZSL2" FT misc_feature 20056475 FT /note="Clone_right_end: RP11-470G19" FT mRNA complement(join(19997017..19997304,19999087..19999157, FT 20000565..20000657,20004608..20004687,20006613..20006718, FT 20010366..20010446,20012232..20012293,20024216..20024304, FT 20024403..20024484,20025305..20025365,20038596..20038660, FT 20039395..20039458,20039605..20039704,20048054..20048215, FT 20049713..20049763,20056628..20056687,20066990..20067043, FT 20067588..20067641,20077364..20077417)) FT /gene="TPTE2" FT /locus_tag="RP11-408K19.2-001" FT /product="transmembrane phosphoinositide 3-phosphatase and FT tensin homolog 2" FT /note="match: ESTs: Em:BG187093.1 Em:BG206253.1 FT Em:BG207812.1" FT /note="match: cDNAs: Em:AJ421032" FT CDS complement(join(19997202..19997304,19999087..19999157, FT 20000565..20000657,20004608..20004687,20006613..20006718, FT 20010366..20010446,20012232..20012293,20024216..20024304, FT 20024403..20024484,20025305..20025365,20038596..20038660, FT 20039395..20039458,20039605..20039704,20048054..20048215, FT 20049713..20049763,20056628..20056687,20066990..20067043, FT 20067588..20067641,20077364..20077374)) FT /gene="TPTE2" FT /locus_tag="RP11-408K19.2-001" FT /standard_name="OTTHUMP00000018072" FT /product="transmembrane phosphoinositide 3-phosphatase and FT tensin homolog 2" FT /note="match: proteins: Sw:Q6XPS3" FT /protein_id="CAH73539.1" FT /translation="MNESPQTNEFKGTTEEAPAKESPHTSEFKGAALVSPISKSMLERL FT SKFEVEDAENVASYDSKIKKIVHSIVSSFAFGIFGVFLVLLDVTLLLADLIFTDSKLYI FT PLEYRSISLAIGLFFLMDVLLRVFVEGWTHLVRLLRLIILIRIFHLLHQKRQLEKLMRR FT LVSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQSFYRNPIEEVVRFLDKKHRNHYR FT VYNLCSERAYDPKHFHNRVSRIMIDDHNVPTLHEMVVFTKEVNEWMAQDLENIVAIHCK FT GGKGRTGTMVCALLIASEIFLTAEESLYYFGERRTNKTHSNKFQGVETPSQNRYVGYFA FT QVKHLYNWNLPPRRILFIKRFIIYSIRGDVCDLKVQVVMEKKVVFSSTSLGNCSILHDI FT ETDKILINVYDGPPLYDDVKVQFFSSNLPKYYDNCPFFFWFNTSFIQNNRLCLPRNELD FT NPHKQKAWKIYPPEFAVEILFGEK" FT mRNA complement(join(19997192..19997304,19999087..19999157, FT 19999847..19999973,20004608..20004687,20006613..20006718, FT 20010366..20010446,20012232..20012293,20024216..20024304, FT 20024403..20024484,20025305..20025365,20038596..20038660, FT 20039395..20039458,20039605..20039704,20066990..20067043, FT 20067588..20067641,20077364..20077374)) FT /gene="TPTE2" FT /locus_tag="RP11-408K19.2-002" FT /product="transmembrane phosphoinositide 3-phosphatase and FT tensin homolog 2" FT /note="match: cDNAs: Em:AJ421033" FT CDS complement(join(19997202..19997304,19999087..19999157, FT 20000565..20000657,20004608..20004687,20006613..20006718, FT 20010366..20010446,20012232..20012293,20024216..20024304, FT 20024403..20024484,20025305..20025365,20038596..20038660, FT 20039395..20039458,20039605..20039704,20048054..20048215, FT 20066990..20067043,20067588..20067641,20077364..20077374)) FT /gene="TPTE2" FT /locus_tag="RP11-408K19.2-003" FT /standard_name="OTTHUMP00000176861" FT /product="transmembrane phosphoinositide 3-phosphatase and FT tensin homolog 2" FT /protein_id="CAH73538.1" FT /translation="MNESPQTNEFKGTTEEAPAKESPHTSEFKGAALVSPISKRIFGVF FT LVLLDVTLLLADLIFTDSKLYIPLEYRSISLAIGLFFLMDVLLRVFVEGWTHLVRLLRL FT IILIRIFHLLHQKRQLEKLMRRLVSENKRRYTRDGFDLDLTYVTERIIAMSFPSSGRQS FT FYRNPIEEVVRFLDKKHRNHYRVYNLCSERAYDPKHFHNRVSRIMIDDHNVPTLHEMVV FT FTKEVNEWMAQDLENIVAIHCKGGKGRTGTMVCALLIASEIFLTAEESLYYFGERRTNK FT THSNKFQGVETPSQNRYVGYFAQVKHLYNWNLPPRRILFIKRFIIYSIRGDVCDLKVQV FT VMEKKVVFSSTSLGNCSILHDIETDKILINVYDGPPLYDDVKVQFFSSNLPKYYDNCPF FT FFWFNTSFIQNNRLCLPRNELDNPHKQKAWKIYPPEFAVEILFGEK" FT misc_feature 20109559 FT /note="Clone_left_end: RP11-76K19" FT misc_feature 20109659..20239337 FT /note="annotated region of clone" FT mRNA complement(join(AL590076.4:6864..6976, FT AL590076.4:8759..8829,AL590076.4:10237..10329, FT AL590076.4:14280..14359,AL590076.4:16285..16390, FT AL590076.4:20038..20118,AL590076.4:21904..21965, FT AL590076.4:33888..33976,AL590076.4:34075..34156, FT AL590076.4:34977..35037,AL590076.4:48268..48332, FT AL590076.4:49067..49130,AL590076.4:49277..49376, FT AL590076.4:57726..57887,AL590076.4:76662..76715, FT AL590076.4:77260..77313,AL590076.4:87036..87089, FT 20110736..20110902)) FT /gene="TPTE2" FT /locus_tag="RP11-408K19.2-003" FT /product="transmembrane phosphoinositide 3-phosphatase and FT tensin homolog 2" FT /note="match: cDNAs: Em:AJ421032.1" FT CDS complement(20134153..20135409) FT /pseudo FT /locus_tag="RP11-76K19.2-001" FT /product="estrogen-related receptor alpha pseudogene" FT /note="match: proteins: Sw:O00268 Sw:O08580 Sw:O73673 FT Sw:O95718 Sw:P02452 Sw:P06211 Sw:P10220 Sw:P11474 Sw:P11475 FT Sw:P12813 Sw:P16058 Sw:P16375 Sw:P19785 Sw:P24493 Sw:P31361 FT Sw:P41829 Sw:P43136 Sw:P47845 Sw:P48634 Sw:P50241 Sw:P50242 FT Sw:P51666 Sw:P62509 Sw:Q16643 Sw:Q29040 Sw:Q61539 Sw:Q63ZV0 FT Sw:Q90733 Sw:Q91250 Sw:Q92731 Sw:Q94407 Sw:Q9PVE2 Sw:Q9PVZ9 FT Sw:Q9TTR8 Sw:Q9TV98 Sw:Q9U2R6 Sw:Q9UM47 Sw:Q9YH32 Sw:Q9YHZ7 FT Tr:O56971 Tr:O93251 Tr:O93321 Tr:Q13577 Tr:Q93107 Tr:Q9KDJ2 FT Tr:Q9P6X0 Tr:Q9U7D9 Tr:Q9UFZ5 Tr:Q9VSE9 Tr:Q9VY72" FT CDS complement(join(20138240..20138462,20138555..20139041)) FT /pseudo FT /locus_tag="RP11-76K19.4-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q96EM1" FT CDS complement(join(20126711..20126854,20139671..20139744, FT 20142819..20142959,20144270..20144428)) FT /pseudo FT /locus_tag="RP11-76K19.1-001" FT /product="MRPS31 (mitochondrial ribosomal protein S31) FT pseudogene" FT /note="match: proteins: Sw:Q61733 Sw:Q92665" FT mRNA join(20161258..20161296,20162108..20162490) FT /locus_tag="RP11-76K19.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA442336" FT misc_feature 20200239 FT /note="Clone_left_end: RP11-523H24" FT mRNA join(20207821..20208101,20216255..20216410, FT 20220583..20221431,20222562..20222661,20224143..20224400, FT 20233135..20233260,20233341..20233429,20235838..20235978, FT 20237180..20237266,AL354808.24:1328..1482, FT AL354808.24:3280..3434,AL354808.24:5139..5266, FT AL354808.24:6109..6192,AL354808.24:6737..8344) FT /gene="RP11-523H24.1" FT /locus_tag="RP11-523H24.1-001" FT /product="M-phase phosphoprotein, mpp" FT /note="match: cDNAs: Em:AK056785.1 Em:BC003542.1" FT /note="match: ESTs: Em:BQ722157.1 Em:CB121595.1 FT Em:CN310969.1 Em:DB212674.1" FT CDS join(20207889..20208101,20216255..20216410, FT 20220583..20221431,20222562..20222661,20224143..20224400, FT 20233135..20233260,20233341..20233429,20235838..20235978, FT 20237180..20237266,AL354808.24:1328..1482, FT AL354808.24:3280..3434,AL354808.24:5139..5266, FT AL354808.24:6109..6192,AL354808.24:6737..6778) FT /gene="RP11-523H24.1" FT /locus_tag="RP11-523H24.1-001" FT /standard_name="OTTHUMP00000018074" FT /product="M-phase phosphoprotein, mpp" FT /note="match: proteins: Sw:Q99549.2 Tr:Q5JTQ0.1 FT Tr:Q5RD82.1" FT /protein_id="CAI16671.1" FT /translation="MEQVAEGARVTAVPVSAADSTEELAEVEEGVGVVGEDNDAAARGA FT EAFGDSEEDGEDVFEVEKILDMKTEGGKVLYKVRWKGYTSDDDTWEPEIHLEDCKEVLL FT EFRKKIAENKAKAVRKDIQRLSLNNDIFEANSDSDQQSETKEDTSPKKKKKKLRQREEK FT SPDDLKKKKAKAGKLKDKSKPDLESSLESLVFDLRTKKRISEAKEELKESKKPKKDEVK FT ETKELKKVKKGEIRDLKTKTREDPKENRKTKKEKFVESQVESESSVLNDSPFPEDDSEG FT LHSDSREEKQNTKSARERAGQDMGLEHGFEKPLDSAMSAEEDTDVRGRRKKKTPRKAED FT TRENRKLENKNAFLEKKTVPKKQRNQDRSKSAAELEKLMPVSAQTPKGRRLSGEERGLW FT STDSAEEDKETKRNESKEKYQKRHDSDKEEKGRKEPKGLKTLKEIRNAFDLFKLTPEEK FT NDVSENNRKREEIPLDFKTIDDHKTKENKQSLKERRNTRDETDTWAYIAAEGDQEVLDS FT VCQADENSDGRQQILSLGMDLQLEWMKLEDFQKHLDGKDENFAATDAIPSNVLRDAVKN FT GDYITVKVALNSNEEYNLDQEDSSGMTLVMLAAAGGQDDLLRLLITKGAKVNGRQKNGT FT TALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLVIECGADCN FT ILSKHQNSALHFAKQSNNVLVYDLLKNHLETLSRVAEETIKDYFEARLALLEPVFPIAC FT HRLCEGPDFSTDFNYKPPQNIPEGSGILLFIFHANFLGKEVIARLCGPCSVQAVVLNDK FT FQLPVFLDSHFVYSFSPVAGPNKLFIRLTEAPSAKVKLLIGAYRVQLQ" FT misc_feature 20224925..20224931 FT /note="770 bases of IS1 transposon removed here (Q47053). FT This sequence represents the duplicated flanking sequence FT of the IS1" FT mRNA join(20233135..20233260,20233341..20233429, FT 20235079..20235230) FT /gene="RP11-523H24.1" FT /locus_tag="RP11-523H24.1-002" FT /product="M-phase phosphoprotein, mpp" FT /note="match: ESTs: Em:AW379922" FT misc_feature 20239237 FT /note="Clone_right_end: RP11-76K19" FT misc_feature 20239338..20408540 FT /note="annotated region of clone" FT CDS join(<20242531..20242671,20244376..20244503, FT 20244980..20245104,20245346..20245403) FT /codon_start=3 FT /gene="RP11-523H24.1" FT /locus_tag="RP11-523H24.1-003" FT /standard_name="OTTHUMP00000018075" FT /product="M-phase phosphoprotein, mpp" FT /protein_id="CAI41000.1" FT /translation="EETIKDYFEARLALLEPVFPIACHRLCEGPDFSTDFNYKPPQNIP FT EGSGILLFIFHANFLGKEVIARLCGPCSVQAVVLNDKFQLPVFLTGSRSVVQAGVQWRG FT LQLTGVLTSQAQAILPPQPPNYLGLKMTVILFTHSALLQVPINSS" FT mRNA join(<20242531..20242671,20244376..20244503, FT 20244980..20245104,20245346..20245429,20245974..20246212) FT /gene="RP11-523H24.1" FT /locus_tag="RP11-523H24.1-003" FT /product="M-phase phosphoprotein, mpp" FT /note="match: ESTs: Em:BE714406 Em:BI039672" FT mRNA join(20244480..20244503,20244980..20245429, FT 20245974..20246082) FT /gene="RP11-523H24.1" FT /locus_tag="RP11-523H24.1-004" FT /product="M-phase phosphoprotein, mpp" FT /note="match: ESTs: Em:BM509713" FT mRNA join(20245375..20245429,20245974..20246320, FT 20247167..20247381) FT /gene="RP11-523H24.1" FT /locus_tag="RP11-523H24.1-005" FT /product="M-phase phosphoprotein, mpp" FT /note="match: ESTs: Em:AA761969 Em:AA805766 Em:AW974625 FT Em:BE044255" FT polyA_signal 20247563..20247568 FT polyA_site 20247599 FT polyA_site complement(20248892) FT polyA_signal complement(20248909..20248914) FT polyA_site complement(20249529) FT polyA_signal complement(20249544..20249549) FT mRNA complement(join(20248764..20248872,20249758..20250024)) FT /locus_tag="RP11-523H24.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI193523" FT mRNA complement(join(20248896..20249124,20251864..20252078)) FT /gene="PSPC1" FT /locus_tag="RP11-523H24.2-003" FT /product="paraspeckle component 1" FT /note="match: ESTs: Em:AA973078 Em:AW631490" FT mRNA join(20252830..20252922,20253668..20253837) FT /locus_tag="RP11-523H24.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW179244" FT mRNA complement(join(20397622..20399375,AL355001.20:3077..3289, FT AL355001.20:5256..5421,AL355001.20:6300..6585, FT AL355001.20:18955..19396)) FT /gene="ZMYM5" FT /locus_tag="RP11-523H24.6-002" FT /product="zinc finger, MYM-type 5" FT /note="match: ESTs: Em:AI912659 Em:AI918754 Em:AI922714 FT Em:AV705269 Em:BE933728 Em:BG027926 Em:BG530620 Em:BM021310 FT Em:BM449459 Em:BM664454 Em:BM696175 Em:H83360 Em:H85760" FT /note="match: cDNAs: Em:AF161535 Em:BC023007" FT CDS complement(join(20398617..20399375,AL355001.20:3077..3289, FT AL355001.20:5256..5421,AL355001.20:6300..6585, FT AL355001.20:18955..19012)) FT /gene="ZMYM5" FT /locus_tag="RP11-523H24.6-002" FT /standard_name="OTTHUMP00000018081" FT /product="zinc finger, MYM-type 5" FT /note="match: proteins: Tr:Q8R1W3 Tr:Q9SN25" FT /protein_id="CAI41001.1" FT /translation="MNVAGDLFQNGEFATHHSPDSWISQSASFPSNQKQPGVDSLSPVA FT LLRKQNFQPTAQQQLTKPAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKR FT TQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCT FT ICSKLAEIRHEVSVNNVTHKLCSNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILV FT IGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNAFREENEKQLYGSSNTLLKKIE FT GIPEKKEKTSQLQLSVECGTDTLLIQENVNLPPSSTSTIADTFQEQLEEKNFEDSIVPV FT VLSADPGTWPRILNIKQRDTLVENVPPQVRNFNFPKDNTGRKFSETYYTRILPNGEKTT FT RSWLLYSTSKDSVFCLYCKLFGEGKNQLKNENGCKDWQHLSHILSKHEESEMHVNNSVK FT YSKLKSDLKKNKAIDAAEHRLYENEKNDGVLLLYT" FT polyA_site complement(20276640) FT polyA_signal complement(20276661..20276666) FT polyA_site complement(20277007) FT polyA_signal complement(20277031..20277036) FT misc_feature 20310187..20310320 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 20323876 FT /note="Clone_left_end: RP11-61K9" FT mRNA join(AL359457.12:98263..98543,AL359457.12:106697..106852, FT AL359457.12:111025..111873,AL359457.12:113004..113103, FT AL359457.12:114585..114842,AL359457.12:123577..123702, FT AL359457.12:123783..123871,AL359457.12:126280..126420, FT AL359457.12:127622..127708,20240565..20240719, FT 20242517..20242671,20244376..20244503,20245346..20245429, FT 20245974..20247581) FT /gene="RP11-523H24.1" FT /locus_tag="RP11-523H24.1-001" FT /product="M-phase phosphoprotein, mpp" FT /note="match: ESTs: Em:BQ722157.1 Em:CB121595.1 FT Em:CN310969.1 Em:DB212674.1" FT /note="match: cDNAs: Em:AK056785.1 Em:BC003542.1" FT CDS join(AL359457.12:98331..98543,AL359457.12:106697..106852, FT AL359457.12:111025..111873,AL359457.12:113004..113103, FT AL359457.12:114585..114842,AL359457.12:123577..123702, FT AL359457.12:123783..123871,AL359457.12:126280..126420, FT AL359457.12:127622..127708,20240565..20240719, FT 20242517..20242671,20244376..20244503,20245346..20245429, FT 20245974..20246015) FT /gene="RP11-523H24.1" FT /locus_tag="RP11-523H24.1-001" FT /standard_name="OTTHUMP00000018074" FT /product="M-phase phosphoprotein, mpp" FT /note="match: proteins: Sw:Q99549.2 Tr:Q5JTQ0.1 FT Tr:Q5RD82.1" FT /protein_id="CAI41002.1" FT /translation="MEQVAEGARVTAVPVSAADSTEELAEVEEGVGVVGEDNDAAARGA FT EAFGDSEEDGEDVFEVEKILDMKTEGGKVLYKVRWKGYTSDDDTWEPEIHLEDCKEVLL FT EFRKKIAENKAKAVRKDIQRLSLNNDIFEANSDSDQQSETKEDTSPKKKKKKLRQREEK FT SPDDLKKKKAKAGKLKDKSKPDLESSLESLVFDLRTKKRISEAKEELKESKKPKKDEVK FT ETKELKKVKKGEIRDLKTKTREDPKENRKTKKEKFVESQVESESSVLNDSPFPEDDSEG FT LHSDSREEKQNTKSARERAGQDMGLEHGFEKPLDSAMSAEEDTDVRGRRKKKTPRKAED FT TRENRKLENKNAFLEKKTVPKKQRNQDRSKSAAELEKLMPVSAQTPKGRRLSGEERGLW FT STDSAEEDKETKRNESKEKYQKRHDSDKEEKGRKEPKGLKTLKEIRNAFDLFKLTPEEK FT NDVSENNRKREEIPLDFKTIDDHKTKENKQSLKERRNTRDETDTWAYIAAEGDQEVLDS FT VCQADENSDGRQQILSLGMDLQLEWMKLEDFQKHLDGKDENFAATDAIPSNVLRDAVKN FT GDYITVKVALNSNEEYNLDQEDSSGMTLVMLAAAGGQDDLLRLLITKGAKVNGRQKNGT FT TALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLVIECGADCN FT ILSKHQNSALHFAKQSNNVLVYDLLKNHLETLSRVAEETIKDYFEARLALLEPVFPIAC FT HRLCEGPDFSTDFNYKPPQNIPEGSGILLFIFHANFLGKEVIARLCGPCSVQAVVLNDK FT FQLPVFLDSHFVYSFSPVAGPNKLFIRLTEAPSAKVKLLIGAYRVQLQ" FT misc_feature 20352417..20352431 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 20353355..20353552 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(20248896..20249124,20251864..20251963, FT 20304379..20304484,20315705..20315789,20325411..20325607, FT 20333463..20333558,20346382..20346683,20356526..20357057)) FT /gene="PSPC1" FT /locus_tag="RP11-523H24.2-001" FT /product="paraspeckle component 1" FT /note="match: ESTs: Em:AA204768 Em:AA761602 Em:AA813396 FT Em:AI357228 Em:AW772499 Em:BE300640 Em:BE873885 Em:BG213283 FT Em:BQ008575 Em:H57726" FT /note="match: cDNAs: Em:BC014184" FT mRNA complement(join(20249528..20249793,20251864..20251963, FT 20304379..20304484,20315705..20315789,20325411..20325607, FT 20333463..20333558,20346382..20346683,20356526..20357082)) FT /gene="PSPC1" FT /locus_tag="RP11-523H24.2-005" FT /product="paraspeckle component 1" FT /note="match: ESTs: Em:AI961496 Em:AU155611 Em:BF034310 FT Em:BG288418 Em:BM678008 Em:BQ004831 Em:H82459" FT /note="match: cDNAs: Em:AK001817" FT mRNA complement(join(20276640..20277500,20279802..20279971, FT 20283682..20283739,20304379..20304484,20315705..20315789, FT 20325411..20325607,20333463..20333558,20346382..20346683, FT 20356526..20357057)) FT /gene="PSPC1" FT /locus_tag="RP11-523H24.2-002" FT /product="paraspeckle component 1" FT /note="match: ESTs: Em:AA394029 Em:AI905087 Em:BE572739 FT Em:BE730935 Em:BF211550 Em:BF229584 Em:BG084911 Em:BG347967 FT Em:BG574005" FT /note="match: cDNAs: Em:AF448795 Em:AK011272 Em:AK017689 FT Em:BC026772" FT CDS complement(join(20277315..20277500,20279802..20279971, FT 20283682..20283739,20304379..20304484,20315705..20315789, FT 20325411..20325607,20333463..20333558,20346382..20346683, FT 20356526..20356897)) FT /gene="PSPC1" FT /locus_tag="RP11-523H24.2-002" FT /standard_name="OTTHUMP00000018077" FT /product="paraspeckle component 1" FT /note="match: proteins: Tr:Q8R326 Tr:Q8WXF1 Tr:Q9CYH1.2" FT /protein_id="CAI41004.1" FT /translation="MMLRGNLKQVRIEKNPARLRALESAVGESEPAAAAAMALALAGEP FT APPAPAPPEDHPDEEMGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFER FT YGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNL FT SPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFL FT LTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKA FT LDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQ FT ELQKRKQIQLRHEEEHRRREEEMIRHREQEELRRQQEGFKPNYMENREQEMRMGDMGPR FT GAINMGDAFSPAPAGNQGPPPMMGMNMNNRATIPGPPMGPGPAMGPEGAANMGTPMMPD FT NGAVHNDRFPQGPPSQMGSPMGSRTGSETPQAPMSGVGPVSGGPGGFGRGSQGGNFEGP FT NKRRRY" FT CDS complement(join(<20333487..20333558,20346382..20346683, FT 20356526..20356897)) FT /gene="PSPC1" FT /locus_tag="RP11-523H24.2-004" FT /standard_name="OTTHUMP00000018078" FT /product="paraspeckle component 1" FT /protein_id="CAI41005.1" FT /translation="MMLRGNLKQVRIEKNPARLRALESAVGESEPAAAAAMALALAGEP FT APPAPAPPEDHPDEEMGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEEDFKRLFER FT YGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNL FT SPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFL FT LTTTPRPVIVEPMEQFDDEDGLPEKL" FT mRNA complement(join(<20333487..20333558,20346382..20346683, FT 20356526..20356931,20357057..20357142)) FT /gene="PSPC1" FT /locus_tag="RP11-523H24.2-004" FT /product="paraspeckle component 1" FT /note="match: ESTs: Em:BG772541 Em:BI463460" FT misc_feature 20370329..20370380 FT /note="Sequence from overlapping clone bA61K9 (AL355001). FT Assembly confirmed by restriction digest" FT CDS complement(20392261..20392759) FT /pseudo FT /locus_tag="RP11-523H24.5-001" FT /product="sialyltransferase 7D FT lneuraminyl-2,3-beta-galactosyl-1,3)-N-acetygalactosaminide FT alpha-2,6-sialyltransferase) (SIAT7D) pseudogene" FT /note="match: proteins: Sw:Q9H4F1 Sw:Q9H4F1 Sw:Q9H4F1 FT Sw:Q9H4F1 Sw:Q9R2B6" FT polyA_site complement(20397622) FT polyA_signal complement(20397642..20397647) FT misc_feature 20408440 FT /note="Clone_right_end: RP11-523H24" FT misc_feature 20408541..20488914 FT /note="annotated region of clone" FT polyA_site complement(20411593) FT polyA_signal complement(20411621..20411626) FT mRNA join(20417276..20417449,20417551..20417812) FT /locus_tag="RP11-61K9.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF676058" FT mRNA complement(join(AL354808.24:158385..160138, FT 20409617..20409829,20411796..20411961,20412840..20413125, FT 20425495..20425936)) FT /gene="ZMYM5" FT /locus_tag="RP11-523H24.6-002" FT /product="zinc finger, MYM-type 5" FT /note="match: ESTs: Em:AI912659 Em:AI918754 Em:AI922714 FT Em:AV705269 Em:BE933728 Em:BG027926 Em:BG530620 Em:BM021310 FT Em:BM449459 Em:BM664454 Em:BM696175 Em:H83360 Em:H85760" FT /note="match: cDNAs: Em:AF161535 Em:BC023007" FT CDS complement(join(AL354808.24:159380..160138, FT 20409617..20409829,20411796..20411961,20412840..20413125, FT 20425495..20425552)) FT /gene="ZMYM5" FT /locus_tag="RP11-523H24.6-002" FT /standard_name="OTTHUMP00000018081" FT /product="zinc finger, MYM-type 5" FT /note="match: proteins: Tr:Q8R1W3 Tr:Q9SN25" FT /protein_id="CAI16178.1" FT /translation="MNVAGDLFQNGEFATHHSPDSWISQSASFPSNQKQPGVDSLSPVA FT LLRKQNFQPTAQQQLTKPAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKR FT TQNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCT FT ICSKLAEIRHEVSVNNVTHKLCSNHCFNKYRLANGLIMNCCEHCGEYMPSKSTGNNILV FT IGGQQKRFCCQSCINEYKQMMETKSKKLTASENRKRNAFREENEKQLYGSSNTLLKKIE FT GIPEKKEKTSQLQLSVECGTDTLLIQENVNLPPSSTSTIADTFQEQLEEKNFEDSIVPV FT VLSADPGTWPRILNIKQRDTLVENVPPQVRNFNFPKDNTGRKFSETYYTRILPNGEKTT FT RSWLLYSTSKDSVFCLYCKLFGEGKNQLKNENGCKDWQHLSHILSKHEESEMHVNNSVK FT YSKLKSDLKKNKAIDAAEHRLYENEKNDGVLLLYT" FT CDS complement(join(20411921..20411961,20425495..20425588, FT 20425829..20426320)) FT /gene="ZMYM5" FT /locus_tag="RP11-523H24.6-001" FT /standard_name="OTTHUMP00000018080" FT /product="zinc finger, MYM-type 5" FT /note="match: proteins: Tr:Q5T6E1.1" FT /protein_id="CAI16181.1" FT /translation="MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSR FT SRNSPVEDDDDDDDVVFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSR FT DLASQKGNISETIVIDDEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRS FT KTKTGVRPFNPGRMNVAGDLFQNGEFATHHSPEMHLQRRLMSFFQ" FT CDS complement(join(20411685..20411961,20412840..20413125, FT 20425495..20425588,20425829..20426320)) FT /gene="ZMYM5" FT /locus_tag="RP11-523H24.6-003" FT /standard_name="OTTHUMP00000018082" FT /product="zinc finger, MYM-type 5" FT /note="match: proteins: Sw:Q9UJ78 Sw:Q9UJ78 Sw:Q9UJ78 FT Sw:Q9UJ78.3" FT /protein_id="CAI16180.1" FT /translation="MEKCSVGGLELTEQTPALLGNMAMATSLMDIGDSFGHPACPLVSR FT SRNSPVEDDDDDDDVVFIESIQPPSISAPAIADQRNFIFASSKNEKPQGNYSVIPPSSR FT DLASQKGNISETIVIDDEEDIETNGGAEKKSSCFIEWGLPGTKNKTNDLDFSTSSLSRS FT KTKTGVRPFNPGRMNVAGDLFQNGEFATHHSPDSWISQSASFPSNQKQPGVDSLSPVAL FT LRKQNFQPTAQQQLTKPAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRT FT QNTRSIICKKDASTKKANVILPVESSKSFQEFYSTSCLSPCENNWNLKKGVFNKSRCTI FT CSKLAEVWIFIPKLLFRLTVIILTFKCYYVLFHLHNARVLDV" FT mRNA complement(join(20411593..20411961,20425495..20425588, FT 20425829..20426330,20436539..20436606,20437590..20437648)) FT /gene="ZMYM5" FT /locus_tag="RP11-523H24.6-001" FT /product="zinc finger, MYM-type 5" FT /note="match: cDNAs: Em:BC007048" FT mRNA complement(join(20411605..20411961,20412840..20413125, FT 20425495..20425588,20425829..20426330,20436539..20436606, FT 20437590..20437664)) FT /gene="ZMYM5" FT /locus_tag="RP11-523H24.6-003" FT /product="zinc finger, MYM-type 5" FT /note="match: ESTs: Em:AA307165 Em:AA831734 Em:AU130521 FT Em:BE674462 Em:BI561630 Em:BI919163 Em:BM449459 Em:BM937195 FT Em:BM996386" FT /note="match: cDNAs: Em:AJ133352" FT mRNA complement(join(20411605..20411961,20412840..20413125, FT 20425495..20426330,20436539..20436606,20437590..20437664)) FT /gene="ZMYM5" FT /locus_tag="RP11-523H24.6-004" FT /product="zinc finger, MYM-type 5" FT /note="match: ESTs: Em:AV756843" FT /note="match: cDNAs: Em:AJ133355" FT mRNA complement(join(20411605..20411961,20425495..20426330, FT 20436539..20436606,20437590..20437664)) FT /gene="ZMYM5" FT /locus_tag="RP11-523H24.6-005" FT /product="zinc finger, MYM-type 5" FT /note="match: cDNAs: Em:AJ133354" FT misc_feature 20486914 FT /note="Clone_right_end: RP11-61K9" FT misc_feature 20504213 FT /note="Clone_left_end: RP11-110K18" FT misc_feature 20508213..20648706 FT /note="annotated region of clone" FT misc_feature 20531014..20531021 FT /note="Single clone region. Assembly consistent with FT restriction digest" FT mRNA join(20532817..20532981,20534098..20534166, FT 20567203..20567704,20567966..20568059,20576990..20577275, FT 20579214..20579379,20580514..20580726,20593687..20594103) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-004" FT /product="zinc finger, MYM-type 2" FT /note="match: ESTs: Em:AA553492 Em:AA661527 Em:AA742242 FT Em:AI457500 Em:AI801865 Em:AW291346 Em:BF433584 FT Em:BM562186" FT /note="match: cDNAs: Em:AL136621" FT mRNA join(20532848..20532911,20534098..20534166, FT 20544165..20544211,20567203..20568059,20576990..20577275, FT 20579214..20579379,20580514..20580726,20593687..20593758, FT 20600752..20600902,20601343..20601458,20605459..20605582, FT 20608401..20608544,20610877..20611051,20625581..20625738, FT 20626417..20626451,20632715..20632844,20633587..20633702, FT 20635193..20635364,20636986..20637111,20638591..20638685, FT 20640991..20641159,20641379..20641530, FT AL138688.27:7550..7664,AL138688.27:8315..8566, FT AL138688.27:9190..9310,AL138688.27:11356..14647) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-003" FT /product="zinc finger, MYM-type 2" FT /note="match: ESTs: Em:AA204514 Em:AA421981 Em:AA710968 FT Em:AF150178 Em:AI690992 Em:AI936478 Em:AL044334 Em:AL048788 FT Em:AU130521 Em:AV683458 Em:AW022188 Em:AW068776 Em:AW078958 FT Em:AW203962 Em:AW891015 Em:AW961090 Em:AW966414 Em:AW967560 FT Em:AW996201 Em:BE080724 Em:BE080869 Em:BE169588 Em:BE532756 FT Em:BE553368 Em:BE689052 Em:BE709520 Em:BE843904 Em:BF858132 FT Em:BG958528 Em:BI730745 Em:BI767789 Em:BM069140 Em:BM148198 FT Em:BM313946 Em:BM451170 Em:BM471877 Em:BM543018 Em:BM679757 FT Em:BM699510 Em:BM749035 Em:BQ005035 Em:BQ420835 Em:C83185" FT /note="match: cDNAs: Em:AF035374 Em:AF060181 Em:AK017929 FT Em:Y13472" FT mRNA join(20532923..20532981,20534098..20534166, FT 20544165..20544211,20567203..20568059,20576990..20577275, FT 20579214..20579379,20580514..20580726,20593687..20593758, FT 20600752..20600902,20601343..20601458,20605459..20605582, FT 20608401..20608544,20610877..20611051,20625581..20625738, FT 20626417..20626451,20632715..20632844,20633587..20633702, FT 20635193..20635364,20636986..20637111,20638591..20638685, FT 20640991..20641159,20641379..20641530, FT AL138688.27:7550..7664,AL138688.27:8315..8566, FT AL138688.27:9190..9310,AL138688.27:11356..12280) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-005" FT /product="zinc finger, MYM-type 2" FT /note="match: cDNAs: Em:AJ224901" FT CDS join(20567213..20568059,20576990..20577275, FT 20579214..20579379,20580514..20580726,20593687..20593758, FT 20600752..20600902,20601343..20601458,20605459..20605582, FT 20608401..20608544,20610877..20611051,20625581..20625738, FT 20626417..20626451,20632715..20632844,20633587..20633702, FT 20635193..20635364,20636986..20637111,20638591..20638685, FT 20640991..20641159,20641379..20641530, FT AL138688.27:7550..7664,AL138688.27:8315..8566, FT AL138688.27:9190..9310,AL138688.27:11356..11548) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-003" FT /standard_name="OTTHUMP00000018086" FT /product="zinc finger, MYM-type 2" FT /note="match: proteins: Sw:Q9CU65 Sw:Q9UBW7" FT /protein_id="CAH70133.1" FT /translation="MDTSSVGGLELTDQTPVLLGSTAMATSLTNVGNSFSGPANPLVSR FT SNKFQNSSVEDDDDVVFIEPVQPPPPSVPVVADQRTITFTSSKNEELQGNDSKITPSSK FT ELASQKGSVSETIVIDDEEDMETNQGQEKNSSNFIERRPPETKNRTNDVDFSTSSFSRS FT KVNAGMGNSGITTEPDSEIQIANVTTLETGVSSVNDGQLENTDGRDMNLMITHVTSLQN FT TNLGDVSNGLQSSNFGVNIQTYTPSLTSQTKTGVGPFNPGRMNVAGDVFQNGESATHHN FT PDSWISQSASFPRNQKQPGVDSLSPVASLPKQIFQPSVQQQPTKPVKVTCANCKKPLQK FT GQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQE FT FCSTSCLSLYEDKQNPTKGALNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRM FT ANGLIMNCCEQCGEYLPSKGAGNNVLVIDGQQKRFCCQSCVSEYKQVGSHPSFLKEVRD FT HMQDSFLMQPEKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEPYCSTACMNSHKTKYAK FT SQSLGIICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQALSMQSSPNGQFVAPSDI FT QLKCNYCKNSFCSKPEILEWEASLHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETV FT NFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGATKELDGVVRDFCSED FT CCKKFQDWYYKACDCCKSQGTLKERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGP FT ENLHYDQGCQTSRTKMTGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTKSCQ FT TDDTWRTEYVPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPA FT AIEELKSKVSSDALDTELLTMTDMMSEDEGKTETTNINSVIIETDIIGSDLLKNSDPET FT QSSMPDVPYEPDLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKA FT VSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVKTRQLDEDLLVLDELKSSKSVKLKED FT LLSHTTAELNYGLAHFVNEIRRPNGENYAPDSIYYLCLGIQEYLCGSNRKDNIFIDPGY FT QTFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYF FT GLKTVEQHLRLSFGTVFRHWKKNPLTMENKACLRYQVSSLCGTDNEDKITTGKRKHEDD FT EPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPECSSSTDSPVWYTSTS FT LDRNTLENMLVRVLLVKDIYDKDNYELDEDTD" FT CDS join(20567213..20567704,20567966..20568059, FT 20576990..20577275,20579214..20579379,20580514..20580726, FT 20593687..20593824) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-004" FT /standard_name="OTTHUMP00000018087" FT /product="zinc finger, MYM-type 2" FT /note="match: proteins: Tr:Q5W0T3.1 Tr:Q9H0V5" FT /protein_id="CAH70134.1" FT /translation="MDTSSVGGLELTDQTPVLLGSTAMATSLTNVGNSFSGPANPLVSR FT SNKFQNSSVEDDDDVVFIEPVQPPPPSVPVVADQRTITFTSSKNEELQGNDSKITPSSK FT ELASQKGSVSETIVIDDEEDMETNQGQEKNSSNFIERRPPETKNRTNDVDFSTSSFSRS FT KTKTGVGPFNPGRMNVAGDVFQNGESATHHNPDSWISQSASFPRNQKQPGVDSLSPVAS FT LPKQIFQPSVQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPA FT PKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGALNKSRCTI FT CGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLVI FT DGQQKRFCCQSCVSEYKQVGSHPSFLKEVRDHMQDSFLMQPEVSRNVNGVQGLNIFEHC FT YYCH" FT mRNA join(20599447..20599515,20600752..20600902, FT 20601343..20601458,20602125..20602204,20605459..20605519) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-006" FT /product="zinc finger, MYM-type 2" FT /note="match: ESTs: Em:AL039668" FT mRNA join(20600659..20600902,20601343..20601458, FT 20602125..20602204,20605459..20605582,20608401..20608544, FT 20610877..20611051,20625581..20625738,20626417..20626451, FT 20632715..20632844,20633587..20633702,20635193..20635364, FT 20636986..20637111,20638591..20638685,20640991..20641159, FT 20641379..20641530,AL138688.27:7550..7664, FT AL138688.27:8315..8566,AL138688.27:9190..9310, FT AL138688.27:11356..12281) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-001" FT /product="zinc finger, MYM-type 2" FT /note="match: ESTs: Em:AL039668" FT /note="match: cDNAs: Em:AF012126" FT CDS join(20605468..20605582,20608401..20608544, FT 20610877..20611051,20625581..20625738,20626417..20626451, FT 20632715..20632844,20633587..20633702,20635193..20635364, FT 20636986..20637111,20638591..20638685,20640991..20641159, FT 20641379..20641530,AL138688.27:7550..7664, FT AL138688.27:8315..8566,AL138688.27:9190..9310, FT AL138688.27:11356..11548) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-001" FT /standard_name="OTTHUMP00000018085" FT /product="zinc finger, MYM-type 2" FT /note="match: proteins: Tr:Q5W0Q3.1" FT /protein_id="CAH70135.1" FT /translation="MQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWEASLHQFCSK FT TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRC FT VTCNYCSQLCKKGATKELDGVVRDFCSEDCCKKFQDWYYKACDCCKSQGTLKERVQWRG FT EMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSAPPPSPTPNKE FT MKNKAVLCKPLTMTKATYCKPHMQTKSCQTDDTWRTEYVPVPIPVPVYIPVPMHMYSQN FT IPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEELKSKVSSDALDTELLTMTDMMSEDEG FT KTETTNINSVIIETDIIGSDLLKNSDPETQSSMPDVPYEPDLDIEIDFPRAAEELDMEN FT EFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWK FT HWVKTRQLDEDLLVLDELKSSKSVKLKEDLLSHTTAELNYGLAHFVNEIRRPNGENYAP FT DSIYYLCLGIQEYLCGSNRKDNIFIDPGYQTFEQELNKILRSWQPSILPDGSIFSRVEE FT DYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKKNPLTMENK FT ACLRYQVSSLCGTDNEDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQ FT NLNQRMDVFYLQPECSSSTDSPVWYTSTSLDRNTLENMLVRVLLVKDIYDKDNYELDED FT TD" FT misc_feature 20605534 FT /note="Clone_left_end: RP11-264J4" FT misc_feature 20605536 FT /note="Clone_left_end: RP11-264J4" FT mRNA join(20640718..20641159,20641379..20641530, FT AL138688.27:7548..7664,AL138688.27:8315..8566, FT AL138688.27:9190..9291) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-007" FT /product="zinc finger, MYM-type 2" FT /note="match: ESTs: Em:BM922915" FT mRNA join(20641119..20641159,20641379..20641530, FT 20642229..20642489) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-008" FT /product="zinc finger, MYM-type 2" FT /note="match: ESTs: Em:AI125726" FT CDS complement(join(20644390..20644653,20644960..20645186, FT 20645965..20646276)) FT /pseudo FT /locus_tag="RP11-110K18.2-001" FT /product="HIV-1 rev binding protein 2 (HRB2) pseudogene" FT /note="match: proteins: Sw:O74777 Sw:P25586 Sw:Q13601" FT misc_feature 20648707..20776400 FT /note="annotated region of clone" FT mRNA join(20651665..20651887,20653370..20653696) FT /locus_tag="RP11-264J4.6-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA047058" FT mRNA join(20657150..20657172,20657771..20657916, FT 20659962..20660151) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-002" FT /product="zinc finger, MYM-type 2" FT /note="match: ESTs: Em:BE140127 Em:BE140140" FT polyA_signal 20660811..20660816 FT polyA_site 20660832 FT polyA_signal 20660863..20660868 FT polyA_site 20660887 FT polyA_signal 20663235..20663240 FT polyA_site 20663253 FT misc_feature 20669983 FT /note="Clone_right_end: RP11-110K18" FT mRNA join(AL137119.26:26636..26699,AL137119.26:27886..27954, FT AL137119.26:37953..37999,AL137119.26:60991..61847, FT AL137119.26:70778..71063,AL137119.26:73002..73167, FT AL137119.26:74302..74514,AL137119.26:87475..87546, FT AL137119.26:94540..94690,AL137119.26:95131..95246, FT AL137119.26:99247..99370,AL137119.26:102189..102332, FT AL137119.26:104665..104839,AL137119.26:119369..119526, FT AL137119.26:120205..120239,AL137119.26:126503..126632, FT AL137119.26:127375..127490,AL137119.26:128981..129152, FT AL137119.26:130774..130899,AL137119.26:132379..132473, FT AL137119.26:134779..134947,AL137119.26:135167..135318, FT 20656156..20656270,20656921..20657172,20657796..20657916, FT 20659962..20663253) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-003" FT /product="zinc finger, MYM-type 2" FT /note="match: ESTs: Em:AA204514 Em:AA421981 Em:AA710968 FT Em:AF150178 Em:AI690992 Em:AI936478 Em:AL044334 Em:AL048788 FT Em:AU130521 Em:AV683458 Em:AW022188 Em:AW068776 Em:AW078958 FT Em:AW203962 Em:AW891015 Em:AW961090 Em:AW966414 Em:AW967560 FT Em:AW996201 Em:BE080724 Em:BE080869 Em:BE169588 Em:BE532756 FT Em:BE553368 Em:BE689052 Em:BE709520 Em:BE843904 Em:BF858132 FT Em:BG958528 Em:BI730745 Em:BI767789 Em:BM069140 Em:BM148198 FT Em:BM313946 Em:BM451170 Em:BM471877 Em:BM543018 Em:BM679757 FT Em:BM699510 Em:BM749035 Em:BQ005035 Em:BQ420835 Em:C83185" FT /note="match: cDNAs: Em:AF035374 Em:AF060181 Em:AK017929 FT Em:Y13472" FT mRNA join(AL137119.26:26711..26769,AL137119.26:27886..27954, FT AL137119.26:37953..37999,AL137119.26:60991..61847, FT AL137119.26:70778..71063,AL137119.26:73002..73167, FT AL137119.26:74302..74514,AL137119.26:87475..87546, FT AL137119.26:94540..94690,AL137119.26:95131..95246, FT AL137119.26:99247..99370,AL137119.26:102189..102332, FT AL137119.26:104665..104839,AL137119.26:119369..119526, FT AL137119.26:120205..120239,AL137119.26:126503..126632, FT AL137119.26:127375..127490,AL137119.26:128981..129152, FT AL137119.26:130774..130899,AL137119.26:132379..132473, FT AL137119.26:134779..134947,AL137119.26:135167..135318, FT 20656156..20656270,20656921..20657172,20657796..20657916, FT 20659962..20660886) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-005" FT /product="zinc finger, MYM-type 2" FT /note="match: cDNAs: Em:AJ224901" FT mRNA join(20676840..20676965,20677065..20677369) FT /locus_tag="RP11-264J4.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI150015" FT CDS join(AL137119.26:61001..61847,AL137119.26:70778..71063, FT AL137119.26:73002..73167,AL137119.26:74302..74514, FT AL137119.26:87475..87546,AL137119.26:94540..94690, FT AL137119.26:95131..95246,AL137119.26:99247..99370, FT AL137119.26:102189..102332,AL137119.26:104665..104839, FT AL137119.26:119369..119526,AL137119.26:120205..120239, FT AL137119.26:126503..126632,AL137119.26:127375..127490, FT AL137119.26:128981..129152,AL137119.26:130774..130899, FT AL137119.26:132379..132473,AL137119.26:134779..134947, FT AL137119.26:135167..135318,20656156..20656270, FT 20656921..20657172,20657796..20657916,20659962..20660154) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-003" FT /standard_name="OTTHUMP00000018086" FT /product="zinc finger, MYM-type 2" FT /note="match: proteins: Sw:Q9CU65 Sw:Q9UBW7" FT /protein_id="CAH71822.1" FT /translation="MDTSSVGGLELTDQTPVLLGSTAMATSLTNVGNSFSGPANPLVSR FT SNKFQNSSVEDDDDVVFIEPVQPPPPSVPVVADQRTITFTSSKNEELQGNDSKITPSSK FT ELASQKGSVSETIVIDDEEDMETNQGQEKNSSNFIERRPPETKNRTNDVDFSTSSFSRS FT KVNAGMGNSGITTEPDSEIQIANVTTLETGVSSVNDGQLENTDGRDMNLMITHVTSLQN FT TNLGDVSNGLQSSNFGVNIQTYTPSLTSQTKTGVGPFNPGRMNVAGDVFQNGESATHHN FT PDSWISQSASFPRNQKQPGVDSLSPVASLPKQIFQPSVQQQPTKPVKVTCANCKKPLQK FT GQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQE FT FCSTSCLSLYEDKQNPTKGALNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRM FT ANGLIMNCCEQCGEYLPSKGAGNNVLVIDGQQKRFCCQSCVSEYKQVGSHPSFLKEVRD FT HMQDSFLMQPEKYGKLTTCTGCRTQCRFFDMTQCIGPNGYMEPYCSTACMNSHKTKYAK FT SQSLGIICHFCKRNSLPQYQATMPDGKLYNFCNSSCVAKFQALSMQSSPNGQFVAPSDI FT QLKCNYCKNSFCSKPEILEWEASLHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETV FT NFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGATKELDGVVRDFCSED FT CCKKFQDWYYKACDCCKSQGTLKERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGP FT ENLHYDQGCQTSRTKMTGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQTKSCQ FT TDDTWRTEYVPVPIPVPVYIPVPMHMYSQNIPVPTTVPVPVPVPVFLPAPLDSSEKIPA FT AIEELKSKVSSDALDTELLTMTDMMSEDEGKTETTNINSVIIETDIIGSDLLKNSDPET FT QSSMPDVPYEPDLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKA FT VSGYQSHDDSSDNSECSFPFKYTYGVNAWKHWVKTRQLDEDLLVLDELKSSKSVKLKED FT LLSHTTAELNYGLAHFVNEIRRPNGENYAPDSIYYLCLGIQEYLCGSNRKDNIFIDPGY FT QTFEQELNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYF FT GLKTVEQHLRLSFGTVFRHWKKNPLTMENKACLRYQVSSLCGTDNEDKITTGKRKHEDD FT EPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPECSSSTDSPVWYTSTS FT LDRNTLENMLVRVLLVKDIYDKDNYELDEDTD" FT polyA_site complement(20712394) FT polyA_signal complement(20712412..20712417) FT CDS complement(20716120..20717427) FT /gene="GJA3" FT /locus_tag="RP11-264J4.3-001" FT /standard_name="OTTHUMP00000205445" FT /product="GJA3 gap junction protein, alpha 3, 46kDa" FT /note="match: proteins: Sw:P29415.2 Sw:Q64448.2 Sw:Q9Y6H8.2 FT Tr:Q4RTP1.1 Tr:Q4SEE8.1" FT /protein_id="CAC16957.3" FT /translation="MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVW FT GDEQSDFTCNTQQPGCENVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLHIVRMEE FT KKKEREEEEQLKRESPSPKEPPQDNPSSRDDRGRVRMAGALLRTYVFNIIFKTLFEVGF FT IAGQYFLYGFELKPLYRCDRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEI FT YHLGWKKLKQGVTSRLGPDASEAPLGTADPPPLPPSSRPPAVAIGFPPYYAHTAAPLGQ FT ARAVGYPGAPPPAADFKLLALTEARGKGQSAKLYNGHHHLLMTEQNWANQAAERQPPAL FT KAYPAASTPAAPSPVGSSSPPLAHEAEAGAAPLLLDGSGSSLEGSALAGTPEEEEQAVT FT TAAQMHQPPLPLGDPGRASKASRASSGRARPEDLAI" FT mRNA complement(join(20712394..20717444,20735029..20735188)) FT /gene="GJA3" FT /locus_tag="RP11-264J4.3-001" FT /product="GJA3 gap junction protein, alpha 3, 46kDa" FT /note="match: cDNAs: Em:BC121137.2" FT /note="match: ESTs: Em:AI002686.1 Em:AI733559.1 FT Em:BF726530.1 Em:DR003755.1 Em:EB361123.1" FT misc_feature 20738240..20738247 FT /note="Single clone region. Region confirmed by restriction FT digest" FT mRNA join(AL137119.26:94447..94690,AL137119.26:95131..95246, FT AL137119.26:95913..95992,AL137119.26:99247..99370, FT AL137119.26:102189..102332,AL137119.26:104665..104839, FT AL137119.26:119369..119526,AL137119.26:120205..120239, FT AL137119.26:126503..126632,AL137119.26:127375..127490, FT AL137119.26:128981..129152,AL137119.26:130774..130899, FT AL137119.26:132379..132473,AL137119.26:134779..134947, FT AL137119.26:135167..135318,20656156..20656270, FT 20656921..20657172,20657796..20657916,20659962..20660887) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-001" FT /product="zinc finger, MYM-type 2" FT /note="match: ESTs: Em:AL039668" FT /note="match: cDNAs: Em:AF012126" FT CDS join(AL137119.26:99256..99370,AL137119.26:102189..102332, FT AL137119.26:104665..104839,AL137119.26:119369..119526, FT AL137119.26:120205..120239,AL137119.26:126503..126632, FT AL137119.26:127375..127490,AL137119.26:128981..129152, FT AL137119.26:130774..130899,AL137119.26:132379..132473, FT AL137119.26:134779..134947,AL137119.26:135167..135318, FT 20656156..20656270,20656921..20657172,20657796..20657916, FT 20659962..20660154) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-001" FT /standard_name="OTTHUMP00000018085" FT /product="zinc finger, MYM-type 2" FT /note="match: proteins: Tr:Q5W0Q3.1" FT /protein_id="CAH71823.1" FT /translation="MQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWEASLHQFCSK FT TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRC FT VTCNYCSQLCKKGATKELDGVVRDFCSEDCCKKFQDWYYKACDCCKSQGTLKERVQWRG FT EMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSAPPPSPTPNKE FT MKNKAVLCKPLTMTKATYCKPHMQTKSCQTDDTWRTEYVPVPIPVPVYIPVPMHMYSQN FT IPVPTTVPVPVPVPVFLPAPLDSSEKIPAAIEELKSKVSSDALDTELLTMTDMMSEDEG FT KTETTNINSVIIETDIIGSDLLKNSDPETQSSMPDVPYEPDLDIEIDFPRAAEELDMEN FT EFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQSHDDSSDNSECSFPFKYTYGVNAWK FT HWVKTRQLDEDLLVLDELKSSKSVKLKEDLLSHTTAELNYGLAHFVNEIRRPNGENYAP FT DSIYYLCLGIQEYLCGSNRKDNIFIDPGYQTFEQELNKILRSWQPSILPDGSIFSRVEE FT DYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKKNPLTMENK FT ACLRYQVSSLCGTDNEDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQ FT NLNQRMDVFYLQPECSSSTDSPVWYTSTSLDRNTLENMLVRVLLVKDIYDKDNYELDED FT TD" FT misc_feature 20748674 FT /note="Clone_left_end: RP11-501K3" FT CDS complement(20753117..20753601) FT /pseudo FT /locus_tag="RP11-264J4.4-001" FT /product="peptidylpropyl isomerase D (cylophilin D) (PPID) FT pseudogene" FT /note="match: proteins: Sw:P10111 Sw:P10255 Sw:P14851 FT Sw:P17742 Sw:P29117 Sw:P30405 Sw:P62936 Sw:P62941 Sw:Q08752 FT Sw:Q9TTC6 Tr:Q41119 Tr:Q99009 Tr:Q9U9R3 Tr:Q9Y536" FT polyA_site complement(20761609) FT mRNA complement(20761611..20763919) FT /gene="GJB2" FT /locus_tag="RP11-264J4.2-002" FT /product="gap junction protein, beta 2, 26kDa" FT /note="match: cDNAs: Em:M86849.2" FT polyA_signal complement(20761627..20761632) FT CDS complement(20763040..20763720) FT /gene="GJB2" FT /locus_tag="RP11-264J4.2-001" FT /standard_name="OTTHUMP00000018093" FT /product="gap junction protein, beta 2, 26kDa" FT /note="match: proteins: Sw:P21994.1 Sw:P29033.3 Sw:P46691.1 FT Sw:Q7JGL3.1 Sw:Q8MHW5.1 Sw:Q8MIT8.1 Sw:Q8MIT9.1 Tr:Q27PX1.1 FT Tr:Q6IPV5.1" FT /protein_id="CAC16959.1" FT /translation="MDWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWG FT DEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKR FT KFIKGEIKSEFKDIEEIKTQKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSM FT QRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSGKS FT KKPV" FT mRNA complement(join(20761609..20763742,20766922..20767037)) FT /gene="GJB2" FT /locus_tag="RP11-264J4.2-001" FT /product="gap junction protein, beta 2, 26kDa" FT /note="match: ESTs: Em:BG285873.1 Em:BG679984.1 FT Em:BP227333.1 Em:DA287424.1" FT /note="match: cDNAs: Em:BC017048.1 Em:BC071703.1" FT misc_feature 20776300 FT /note="Clone_right_end: RP11-264J4" FT mRNA join(AL137119.26:134506..134947,AL137119.26:135167..135318, FT 20656154..20656270,20656921..20657172,20657796..20657897) FT /gene="ZMYM2" FT /locus_tag="RP11-264J4.7-007" FT /product="zinc finger, MYM-type 2" FT /note="match: ESTs: Em:BM922915" FT misc_feature 20776401..20936835 FT /note="annotated region of clone" FT polyA_site complement(20796110) FT polyA_signal complement(20796127..20796132) FT CDS complement(20796834..20797619) FT /gene="GJB6" FT /locus_tag="RP11-501K3.1-001" FT /standard_name="OTTHUMP00000018096" FT /product="gap junction protein, beta 6" FT /note="match: proteins: Sw:O95452.2 Sw:P70689.1 Sw:Q5E9Z5.1 FT Tr:Q3URC5.1 Tr:Q3UYK0.1 Tr:Q5T5U0.1 Tr:Q6AZ42.1 Tr:Q6PYU2.1 FT Tr:Q7TSX0.3 Tr:Q9R140.1" FT /protein_id="CAI14832.1" FT /translation="MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWG FT DEQEDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTR FT KFRRGEKRNDFKDIEDIKKQKVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHL FT PWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRS FT KRAQTQKNHPNHALKESKQNEMNELISDSGQNAITGFPS" FT mRNA complement(join(20796110..20797634,20803719..20803888, FT 20805005..20805117)) FT /gene="GJB6" FT /locus_tag="RP11-501K3.1-001" FT /product="gap junction protein, beta 6" FT /note="match: ESTs: Em:BP228254.1 Em:BP309452.1" FT /note="match: cDNAs: Em:BC038934.1" FT mRNA complement(join(20796110..20797634,20803719..20803888, FT 20806333..20806442)) FT /gene="GJB6" FT /locus_tag="RP11-501K3.1-002" FT /product="gap junction protein, beta 6" FT /note="match: ESTs: Em:BM927223.1 Em:BP227986.1" FT mRNA complement(join(20796110..20797634,20803719..20803888, FT 20805521..20805644,20806333..20806440)) FT /gene="GJB6" FT /locus_tag="RP11-501K3.1-003" FT /product="gap junction protein, beta 6" FT /note="match: ESTs: Em:BM549069.1 Em:BM910179.1 FT Em:BX441414.2 Em:CV575718.1" FT /note="match: cDNAs: Em:AY789475.1" FT mRNA complement(join(20796110..20797634,20803719..20803888, FT 20804837..20804946,20805521..20805644,20806333..20806534)) FT /gene="GJB6" FT /locus_tag="RP11-501K3.1-004" FT /product="gap junction protein, beta 6" FT /note="match: ESTs: Em:DB166087.1 Em:DN998505.1" FT /note="match: cDNAs: Em:AK075247.1" FT misc_feature 20840023 FT /note="Clone_left_end: RP11-187L3" FT misc_feature 20922741..20922783 FT /note="Single clone region. assembly confirmed by FT restriction digest data" FT misc_feature 20922826..20923073 FT /note="Single clone region. assembly confirmed by FT restriction digest data" FT misc_feature 20936734 FT /note="Clone_right_end: RP11-501K3" FT misc_feature 20936836..21022914 FT /note="annotated region of clone" FT misc_feature 20939076 FT /note="Clone_left_end: RP11-417B5" FT mRNA complement(join(21001269..21001444,21006241..21006435, FT 21013732..21013893,AL590096.16:19767..19833)) FT /gene="CRYL1" FT /locus_tag="RP11-187L3.1-003" FT /product="crystallin, lambda 1" FT /note="match: ESTs: Em:BF724794" FT misc_feature 20963667..20964290 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 20964389..20964400 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 20964534..20964652 FT /note="Tandem repeat. Single clone region. Assembly FT confirmed by restriction digest data" FT CDS complement(join(20978268..20978381,20978774..20978880, FT 20987421..20987526,21006241..21006435,21013732..21013893, FT AL590096.16:19767..19893,AL590096.16:42840..42922)) FT /gene="CRYL1" FT /locus_tag="RP11-187L3.1-002" FT /standard_name="OTTHUMP00000018098" FT /product="crystallin, lambda 1" FT /note="match: proteins: Sw:Q9Y2S2" FT /protein_id="CAH71073.1" FT /translation="MLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLS FT VEEQLSLISGCPNIQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCL FT MPSKLFAGLVHVKQCIVAHPVNPPYYIPLVELVPHPETAPTTVDRTHALMKKIGQCPMR FT VQKEVAGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLN FT AEGMLSYCDRYSEGIKHVLQTFGPIPEFSRATAEKVNQDMCMKVPDDPEHLAARRQWRD FT ECLMRLAKLKSQVQPQ" FT polyA_site complement(20977806) FT polyA_signal complement(20977828..20977833) FT mRNA complement(join(20977806..20978381,20978774..20978880, FT 20987421..20987526,21006241..21006435,21013732..21013893, FT AL590096.16:19767..19893,AL590096.16:42840..42947, FT AL590096.16:56151..56254)) FT /gene="CRYL1" FT /locus_tag="RP11-187L3.1-001" FT /product="crystallin, lambda 1" FT /note="match: cDNAs: Em:AF160216 Em:AF351609 Em:AK003913 FT Em:AK024041 Em:BC004074 Em:BC008562 Em:BC027064" FT /note="match: ESTs: Em:AA108958 Em:AI385850 Em:AI467853 FT Em:AL553306 Em:AL574045 Em:AL576446 Em:AU143281 Em:AV721277 FT Em:AW258263 Em:BB641062 Em:BG709063 Em:BG818297 Em:BG819826 FT Em:BI458419 Em:BI597516 Em:BI667654 Em:BI754315 Em:BI834560 FT Em:BM546169 Em:BM905621 Em:BQ006686 Em:R18686" FT CDS complement(join(20978268..20978381,20978774..20978880, FT 20987421..20987526,21006241..21006435,21013732..21013893, FT AL590096.16:19767..19893,AL590096.16:42840..42947, FT AL590096.16:56151..56191)) FT /gene="CRYL1" FT /locus_tag="RP11-187L3.1-001" FT /standard_name="OTTHUMP00000018097" FT /product="crystallin, lambda 1" FT /note="match: proteins: Sw:P14755 Sw:Q8SPX7 Sw:Q99KP3 FT Tr:Q9P0G7" FT /protein_id="CAH71074.1" FT /translation="MASSAAGCVVIVGSGVIGRSWAMLFASGGFQVKLYDIEQQQIRNA FT LENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPNIQEAVEGAMHIQECVPEDLELKKK FT IFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQCIVAHPVNPPYYIPLVELVPHPE FT TAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAIISEAWRLVEEGIVSPSDLDL FT VMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHVLQTFGPIPEFSRATAEKVN FT QDMCMKVPDDPEHLAARRQWRDECLMRLAKLKSQVQPQ" FT mRNA complement(join(20977810..20978381,20978774..20978880, FT 20987421..20987526,21006241..21006435,21013732..21013893, FT AL590096.16:19767..19893,AL590096.16:42840..42947, FT AL590096.16:46118..46217,AL590096.16:56151..56254)) FT /gene="CRYL1" FT /locus_tag="RP11-187L3.1-002" FT /product="crystallin, lambda 1" FT /note="match: cDNAs: Em:AF077049" FT misc_feature 21020914 FT /note="Clone_right_end: RP11-187L3" FT misc_feature 21022915..21045742 FT /note="annotated region of clone" FT misc_feature 21041743 FT /note="Clone_left_end: RP11-476H16" FT misc_feature 21045743..21163616 FT /note="annotated region of clone" FT mRNA complement(join(AL161715.24:66434..66609, FT AL161715.24:71406..71600,AL161715.24:78897..79058, FT 21063509..21063575)) FT /gene="CRYL1" FT /locus_tag="RP11-187L3.1-003" FT /product="crystallin, lambda 1" FT /note="match: ESTs: Em:BF724794" FT misc_feature 21069365..21069659 FT /note="Single clone region. Assembly consistent with FT restriction digest data" FT misc_feature 21069630 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 200bp by restriction digest data" FT CDS complement(join(AL161715.24:43433..43546, FT AL161715.24:43939..44045,AL161715.24:52586..52691, FT AL161715.24:71406..71600,AL161715.24:78897..79058, FT 21063509..21063635,21086582..21086664)) FT /gene="CRYL1" FT /locus_tag="RP11-187L3.1-002" FT /standard_name="OTTHUMP00000018098" FT /product="crystallin, lambda 1" FT /note="match: proteins: Sw:Q9Y2S2" FT /protein_id="CAI14388.1" FT /translation="MLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLS FT VEEQLSLISGCPNIQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCL FT MPSKLFAGLVHVKQCIVAHPVNPPYYIPLVELVPHPETAPTTVDRTHALMKKIGQCPMR FT VQKEVAGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLN FT AEGMLSYCDRYSEGIKHVLQTFGPIPEFSRATAEKVNQDMCMKVPDDPEHLAARRQWRD FT ECLMRLAKLKSQVQPQ" FT mRNA complement(join(AL161715.24:42971..43546, FT AL161715.24:43939..44045,AL161715.24:52586..52691, FT AL161715.24:71406..71600,AL161715.24:78897..79058, FT 21063509..21063635,21086582..21086689,21099893..21099996)) FT /gene="CRYL1" FT /locus_tag="RP11-187L3.1-001" FT /product="crystallin, lambda 1" FT /note="match: ESTs: Em:AA108958 Em:AI385850 Em:AI467853 FT Em:AL553306 Em:AL574045 Em:AL576446 Em:AU143281 Em:AV721277 FT Em:AW258263 Em:BB641062 Em:BG709063 Em:BG818297 Em:BG819826 FT Em:BI458419 Em:BI597516 Em:BI667654 Em:BI754315 Em:BI834560 FT Em:BM546169 Em:BM905621 Em:BQ006686 Em:R18686" FT /note="match: cDNAs: Em:AF160216 Em:AF351609 Em:AK003913 FT Em:AK024041 Em:BC004074 Em:BC008562 Em:BC027064" FT CDS complement(join(AL161715.24:43433..43546, FT AL161715.24:43939..44045,AL161715.24:52586..52691, FT AL161715.24:71406..71600,AL161715.24:78897..79058, FT 21063509..21063635,21086582..21086689,21099893..21099933)) FT /gene="CRYL1" FT /locus_tag="RP11-187L3.1-001" FT /standard_name="OTTHUMP00000018097" FT /product="crystallin, lambda 1" FT /note="match: proteins: Sw:P14755 Sw:Q8SPX7 Sw:Q99KP3 FT Tr:Q9P0G7" FT /protein_id="CAI14389.1" FT /translation="MASSAAGCVVIVGSGVIGRSWAMLFASGGFQVKLYDIEQQQIRNA FT LENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPNIQEAVEGAMHIQECVPEDLELKKK FT IFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQCIVAHPVNPPYYIPLVELVPHPE FT TAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAIISEAWRLVEEGIVSPSDLDL FT VMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHVLQTFGPIPEFSRATAEKVN FT QDMCMKVPDDPEHLAARRQWRDECLMRLAKLKSQVQPQ" FT mRNA complement(join(AL161715.24:42975..43546, FT AL161715.24:43939..44045,AL161715.24:52586..52691, FT AL161715.24:71406..71600,AL161715.24:78897..79058, FT 21063509..21063635,21086582..21086689,21089860..21089959, FT 21099893..21099996)) FT /gene="CRYL1" FT /locus_tag="RP11-187L3.1-002" FT /product="crystallin, lambda 1" FT /note="match: cDNAs: Em:AF077049" FT misc_feature 21121142 FT /note="Clone_right_end: RP11-417B5" FT mRNA join(21141208..21141395,21148519..21148614, FT 21157096..21157158,AL161772.17:2334..2390, FT AL161772.17:3490..3543,AL161772.17:4141..4204, FT AL161772.17:4858..4927,AL161772.17:8673..8763, FT AL161772.17:9538..9642,AL161772.17:11174..11276, FT AL161772.17:11974..12088,AL161772.17:14228..14456, FT AL161772.17:17558..17628,AL161772.17:28316..28402, FT AL161772.17:38273..38372,AL161772.17:43539..43625, FT AL161772.17:50855..51041,AL161772.17:53813..53921, FT AL161772.17:55978..56128,AL161772.17:57366..57481, FT AL161772.17:66399..66451,AL161772.17:68888..68953, FT AL161772.17:76021..76127,AL161772.17:83496..83562, FT AL161772.17:103228..103338,AL161772.17:103577..103885) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-001" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: ESTs: Em:AA192503 Em:AA308987 Em:AA428525 FT Em:AA481279 Em:AA481585 Em:AA705430 Em:AI913262 Em:AL602825 FT Em:AU124457 Em:AU128273 Em:AU133199 Em:AW513216 Em:AW959936 FT Em:BE534104 Em:BE768720 Em:BE873323 Em:BE926046 Em:BF015765 FT Em:BF165608 Em:BF562311 Em:BG078210 Em:BG183365 Em:BG189704 FT Em:BG716914 Em:BI464975 Em:BM537972 Em:BQ571494 Em:R14397 FT Em:W72128 Em:W77852" FT /note="match: cDNAs: Em:U20362" FT mRNA join(21141277..21141395,21141809..21141924, FT 21142024..21142136,21148519..21148614,21157096..21157158, FT AL161772.17:2334..2390,AL161772.17:3490..3543, FT AL161772.17:4141..4204,AL161772.17:4858..4927, FT AL161772.17:8673..8763,AL161772.17:9538..9642, FT AL161772.17:11174..11276,AL161772.17:11974..12088, FT AL161772.17:14228..14456,AL161772.17:17558..17628, FT AL161772.17:28316..28402,AL161772.17:38273..38372, FT AL161772.17:43539..43625,AL161772.17:50855..51041, FT AL161772.17:53813..53921,AL161772.17:55978..56128, FT AL161772.17:57366..57481,AL161772.17:66399..66451, FT AL161772.17:68888..68953,AL161772.17:76021..76127, FT AL161772.17:83496..83562,AL161772.17:103228..103338, FT AL161772.17:103577..103887) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-002" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: ESTs: Em:AL704952 Em:AL705221 Em:AL705257 FT Em:AL705597 Em:BG724352 Em:BI460824" FT /note="match: cDNAs: Em:BC030776" FT mRNA join(21141305..21141395,21141809..21142136, FT 21148519..21148614,21157096..>21157155) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-007" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: ESTs: Em:BG723272 Em:BI464276" FT CDS join(21142116..21142136,21148519..21148614, FT 21157096..21157158,AL161772.17:2334..2390, FT AL161772.17:3490..3543,AL161772.17:4141..4204, FT AL161772.17:4858..4927,AL161772.17:8673..8763, FT AL161772.17:9538..9642,AL161772.17:11174..11276, FT AL161772.17:11974..12088,AL161772.17:14228..14456, FT AL161772.17:17558..17628,AL161772.17:28316..28402, FT AL161772.17:38273..38372,AL161772.17:43539..43625, FT AL161772.17:50855..51041,AL161772.17:53813..53921, FT AL161772.17:55978..56128,AL161772.17:57366..57481, FT AL161772.17:66399..66451,AL161772.17:68888..68953, FT AL161772.17:76021..76127,AL161772.17:83496..83562, FT AL161772.17:103228..103338,AL161772.17:103577..103698) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-002" FT /standard_name="OTTHUMP00000018100" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: proteins: Tr:Q8N719.2" FT /protein_id="CAI14390.2" FT /translation="MKFTNTKVQMMQNVHLAPETDEDDLYSGYNDYNPIYDIEELENDA FT AFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGSKTSLASSIGRPMTGAIQDGVTRPM FT TAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKKDSPEEKIKQLEKEVNELVEESCI FT ANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSVNEMY FT AEALNTYQVIVKNKMFSNAGILKMNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRI FT KIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGYNLTICYFAIGDREKMKKAFQKL FT ITVPLEIDEDKYISPSDDPHTNLVTEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVI FT ETSFAAGYDWCVEVVKASQYVELANDLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVK FT SAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAALTNKGNTVFANGDYEKAAEFYK FT EALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEVLYQIANIYELMEN FT PSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL FT GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFP FT ENVECLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIREQRIKSGRDGSGGSRGKREGS FT ASGDSGQNYSASSKGERLSARLRALPGTNEPYESSSNKEIDASYVDPLGPQIERPKTAA FT KKRIDEDDFADEELGDDLLPE" FT CDS join(21148525..21148614,21157096..21157158, FT AL161772.17:2334..2390,AL161772.17:3490..3543, FT AL161772.17:4141..4204,AL161772.17:4858..4927, FT AL161772.17:8673..8763,AL161772.17:9538..9642, FT AL161772.17:11174..11276,AL161772.17:11974..12088, FT AL161772.17:14228..14456,AL161772.17:17558..17628, FT AL161772.17:28316..28402,AL161772.17:38273..38372, FT AL161772.17:43539..43625,AL161772.17:50855..51041, FT AL161772.17:53813..53921,AL161772.17:55978..56128, FT AL161772.17:57366..57481,AL161772.17:66399..66451, FT AL161772.17:68888..68953,AL161772.17:76021..76127, FT AL161772.17:83496..83562,AL161772.17:103228..103338, FT AL161772.17:103577..103698) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-001" FT /standard_name="OTTHUMP00000018099" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: proteins: Sw:Q13099.1" FT /protein_id="CAM20430.1" FT /translation="MMQNVHLAPETDEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTS FT HGRRPPITAKISSTAVTRPIATGYGSKTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFT FT KAALRGSAFDPLSQSRGPASPLEAKKKDSPEEKIKQLEKEVNELVEESCIANSCGDLKL FT ALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSVNEMYAEALNTYQV FT IVKNKMFSNAGILKMNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVT FT FIQAGQYSDAINSYEHIMSMAPNLKAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDE FT DKYISPSDDPHTNLVTEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYD FT WCVEVVKASQYVELANDLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSA FT LYYMGKDFAQASSYADIAVNSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSC FT TEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLM FT QVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQF FT WEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFL FT VRLCTDLGLKDAQEYARKLKRLEKMKEIREQRIKSGRDGSGGSRGKREGSASGDSGQNY FT SASSKGERLSARLRALPGTNEPYESSSNKEIDASYVDPLGPQIERPKTAAKKRIDEDDF FT ADEELGDDLLPE" FT CDS join(21148525..21148614,21157096..>21157155) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-007" FT /standard_name="OTTHUMP00000018101" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /protein_id="CAI14391.1" FT /translation="MMQNVHLAPETDEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTS FT HGRRP" FT misc_feature 21159617 FT /note="Clone_left_end: RP11-172H24" FT misc_feature 21163617..21285195 FT /note="annotated region of clone" FT mRNA join(21179195..21179244,21188496..21188574, FT 21189932..21190018,21199889..21199988,21205155..21206278) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-003" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: cDNAs: Em:AK058172" FT /note="match: ESTs: Em:AF150292" FT CDS 21181407..21182270 FT /pseudo FT /locus_tag="RP11-172H24.3-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:P52178 Sw:Q96K37 Tr:P93642 FT Tr:P93643 Tr:Q94JW4 Tr:Q9H7U6 Tr:Q9MSB5 Tr:Q9SSA0 FT Tr:Q9VR50" FT mRNA join(21189930..21190018,21199889..21199988, FT 21205155..21205241,21228015..21228067,21230504..21230569, FT 21237402..21237525,21237637..21237743,21245112..21245178, FT 21264844..21264954,21265193..21265356) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-005" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: ESTs: Em:BM804746 Em:BM804766" FT mRNA join(21205156..21205241,21212471..21212657, FT 21215429..21215855) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-004" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: ESTs: Em:BF982385" FT misc_feature 21222895 FT /note="Clone_right_end: RP11-476H16" FT mRNA join(21237404..21237743,21245112..21245178) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-006" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT mRNA join(AL590096.16:97466..97653,AL590096.16:104777..104872, FT AL590096.16:113354..113416,21163950..21164006, FT 21165106..21165159,21165757..21165820,21166474..21166543, FT 21170289..21170379,21171154..21171258,21172790..21172892, FT 21173590..21173704,21175844..21176072,21179174..21179244, FT 21189932..21190018,21199889..21199988,21205155..21205241, FT 21212471..21212657,21215429..21215537,21217594..21217744, FT 21218982..21219097,21228015..21228067,21230504..21230569, FT 21237637..21237743,21245112..21245178,21264844..21264954, FT 21265193..21265501) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-001" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: cDNAs: Em:U20362" FT /note="match: ESTs: Em:AA192503 Em:AA308987 Em:AA428525 FT Em:AA481279 Em:AA481585 Em:AA705430 Em:AI913262 Em:AL602825 FT Em:AU124457 Em:AU128273 Em:AU133199 Em:AW513216 Em:AW959936 FT Em:BE534104 Em:BE768720 Em:BE873323 Em:BE926046 Em:BF015765 FT Em:BF165608 Em:BF562311 Em:BG078210 Em:BG183365 Em:BG189704 FT Em:BG716914 Em:BI464975 Em:BM537972 Em:BQ571494 Em:R14397 FT Em:W72128 Em:W77852" FT mRNA join(AL590096.16:97535..97653,AL590096.16:98067..98182, FT AL590096.16:98282..98394,AL590096.16:104777..104872, FT AL590096.16:113354..113416,21163950..21164006, FT 21165106..21165159,21165757..21165820,21166474..21166543, FT 21170289..21170379,21171154..21171258,21172790..21172892, FT 21173590..21173704,21175844..21176072,21179174..21179244, FT 21189932..21190018,21199889..21199988,21205155..21205241, FT 21212471..21212657,21215429..21215537,21217594..21217744, FT 21218982..21219097,21228015..21228067,21230504..21230569, FT 21237637..21237743,21245112..21245178,21264844..21264954, FT 21265193..21265503) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-002" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: cDNAs: Em:BC030776" FT /note="match: ESTs: Em:AL704952 Em:AL705221 Em:AL705257 FT Em:AL705597 Em:BG724352 Em:BI460824" FT CDS join(AL590096.16:98374..98394,AL590096.16:104777..104872, FT AL590096.16:113354..113416,21163950..21164006, FT 21165106..21165159,21165757..21165820,21166474..21166543, FT 21170289..21170379,21171154..21171258,21172790..21172892, FT 21173590..21173704,21175844..21176072,21179174..21179244, FT 21189932..21190018,21199889..21199988,21205155..21205241, FT 21212471..21212657,21215429..21215537,21217594..21217744, FT 21218982..21219097,21228015..21228067,21230504..21230569, FT 21237637..21237743,21245112..21245178,21264844..21264954, FT 21265193..21265314) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-002" FT /standard_name="OTTHUMP00000018100" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: proteins: Tr:Q8N719.2" FT /protein_id="CAH70874.2" FT /translation="MKFTNTKVQMMQNVHLAPETDEDDLYSGYNDYNPIYDIEELENDA FT AFQQAVRTSHGRRPPITAKISSTAVTRPIATGYGSKTSLASSIGRPMTGAIQDGVTRPM FT TAVRAAGFTKAALRGSAFDPLSQSRGPASPLEAKKKDSPEEKIKQLEKEVNELVEESCI FT ANSCGDLKLALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSVNEMY FT AEALNTYQVIVKNKMFSNAGILKMNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRI FT KIMQNIGVTFIQAGQYSDAINSYEHIMSMAPNLKAGYNLTICYFAIGDREKMKKAFQKL FT ITVPLEIDEDKYISPSDDPHTNLVTEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVI FT ETSFAAGYDWCVEVVKASQYVELANDLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVK FT SAAATNLSALYYMGKDFAQASSYADIAVNSDRYNPAALTNKGNTVFANGDYEKAAEFYK FT EALRNDSSCTEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEVLYQIANIYELMEN FT PSQAIEWLMQVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWL FT GAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFP FT ENVECLRFLVRLCTDLGLKDAQEYARKLKRLEKMKEIREQRIKSGRDGSGGSRGKREGS FT ASGDSGQNYSASSKGERLSARLRALPGTNEPYESSSNKEIDASYVDPLGPQIERPKTAA FT KKRIDEDDFADEELGDDLLPE" FT polyA_signal 21265483..21265488 FT polyA_site 21265503 FT CDS join(AL590096.16:104783..104872,AL590096.16:113354..113416, FT 21163950..21164006,21165106..21165159,21165757..21165820, FT 21166474..21166543,21170289..21170379,21171154..21171258, FT 21172790..21172892,21173590..21173704,21175844..21176072, FT 21179174..21179244,21189932..21190018,21199889..21199988, FT 21205155..21205241,21212471..21212657,21215429..21215537, FT 21217594..21217744,21218982..21219097,21228015..21228067, FT 21230504..21230569,21237637..21237743,21245112..21245178, FT 21264844..21264954,21265193..21265314) FT /gene="IFT88" FT /locus_tag="RP11-172H24.2-001" FT /standard_name="OTTHUMP00000018099" FT /product="intraflagellar transport 88 homolog FT (Chlamydomonas)" FT /note="match: proteins: Sw:Q13099.1" FT /protein_id="CAM13405.1" FT /translation="MMQNVHLAPETDEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTS FT HGRRPPITAKISSTAVTRPIATGYGSKTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFT FT KAALRGSAFDPLSQSRGPASPLEAKKKDSPEEKIKQLEKEVNELVEESCIANSCGDLKL FT ALEKAKDAGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSVNEMYAEALNTYQV FT IVKNKMFSNAGILKMNMGNIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVT FT FIQAGQYSDAINSYEHIMSMAPNLKAGYNLTICYFAIGDREKMKKAFQKLITVPLEIDE FT DKYISPSDDPHTNLVTEAIKNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGYD FT WCVEVVKASQYVELANDLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSA FT LYYMGKDFAQASSYADIAVNSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSC FT TEALYNIGLTYEKLNRLDEALDCFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLM FT QVVSVIPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQF FT WEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFL FT VRLCTDLGLKDAQEYARKLKRLEKMKEIREQRIKSGRDGSGGSRGKREGSASGDSGQNY FT SASSKGERLSARLRALPGTNEPYESSSNKEIDASYVDPLGPQIERPKTAAKKRIDEDDF FT ADEELGDDLLPE" FT misc_feature 21275789..21276042 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC FT clone.Restriction digest data confirm the assembly" FT mRNA join(21276266..21277459,21278135..21278225) FT /gene="IL17D" FT /locus_tag="RP11-261P13.1-003" FT /product="interleukin 17D" FT /note="match: ESTs: Em:AA887164 Em:AI123413 Em:AI139970 FT Em:AI358845 Em:AI870345 Em:AI932239 Em:AI948552 Em:AW291768 FT Em:BF342011 Em:N43905" FT misc_feature 21276555..21276695 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC FT clone.Restriction digest data confirm the assembly" FT mRNA join(21277482..21277583,21278135..21278430, FT AL512652.18:10580..12042) FT /gene="IL17D" FT /locus_tag="RP11-261P13.1-001" FT /product="interleukin 17D" FT /note="match: cDNAs: Em:AF458062.1 Em:AY078238.1 FT Em:AY359113.1 Em:BC036243.1" FT /note="match: ESTs: Em:BI561289.1 Em:BI601695.1" FT CDS join(21278141..21278430,AL512652.18:10580..10898) FT /gene="IL17D" FT /locus_tag="RP11-261P13.1-001" FT /standard_name="OTTHUMP00000018104" FT /product="interleukin 17D" FT /note="match: proteins: Sw:Q8TAD2.1 Tr:Q5VUZ7.1" FT /protein_id="CAH70875.1" FT /translation="MLVAGFLLALPPSWAAGAPRAGRRPARPRGCADRPEELLEQLYGR FT LAAGVLSAFHHTLQLGPREQARNASCPAGGRPADRRFRPPTNLRSVSPWAYRISYDPAR FT YPRYLPEAYCLCRGCLTGLFGEEDVRFRSAPVYMPTVVLRRTPACAGGRSVYTEAYVTI FT PVGCTCVPEPEKDADSINSSIDKQGAKLLLGPNDAPAGP" FT mRNA join(21278218..21278430,AL512652.18:6042..6313, FT AL512652.18:10580..10629) FT /gene="IL17D" FT /locus_tag="RP11-261P13.1-002" FT /product="interleukin 17D" FT /note="match: ESTs: Em:AI357592" FT misc_feature 21285196..21420305 FT /note="annotated region of clone" FT misc_feature 21285196 FT /note="Clone_left_end: RP11-261P13" FT polyA_signal 21297215..21297220 FT polyA_site 21297237 FT CDS complement(join(21321174..21321594,21321905..21322196)) FT /pseudo FT /locus_tag="RP11-261P13.3-001" FT /product="RAN, member RAS oncogene family (RAN) pseudogene" FT /note="match: proteins: Sw:O17915 Sw:P32835 Sw:P32836 FT Sw:P38546 Sw:P38547 Sw:P41917 Sw:P41919 Sw:P42558 Sw:P52301 FT Sw:P54765 Sw:P54766 Sw:P62826 Sw:P62826 Sw:P62826 Sw:P62828 FT Sw:Q61820 Sw:Q61820 Sw:Q8H156 Sw:Q8H156 Sw:Q9P4E9 Sw:Q9VZ23 FT Sw:Q9VZ23 Sw:Q9YGC0 Tr:P62827 Tr:Q9FSZ5 Tr:Q9XJ44" FT misc_feature 21329765 FT /note="Clone_right_end: RP11-172H24" FT CDS complement(join(21303219..21303355,21305980..21306260, FT 21311862..21311944,21331594..21331737)) FT /gene="RP11-261P13.2" FT /locus_tag="RP11-261P13.2-001" FT /standard_name="OTTHUMP00000018102" FT /product="novel protein" FT /note="match: proteins: Tr:Q8WVE0.1" FT /protein_id="CAH71794.1" FT /translation="MSDLEDDETPQLSAHALAALQEFYAEQKQQIEPGEDDKYNIGIIE FT ENWQLSQFWYSQETALQLAQEAIAAVGEGGRIACVSAPSVYQKLRELCRENFSIYIFEY FT DKRFAMYGEEFIFYDYNNPLDLPERIAAHSFDIVIADPPYLSEECLRKTSETVKYLTRG FT KILLCTGAIMEEQAAELLGVKMCTFVPRHTRNLANEFRCYVNYDSGLDCGI" FT mRNA complement(join(21353014..21358058,21361104..21361196, FT 21361620..21361737,21362625..21362755,21364601..21364719, FT 21370215..21370395,21370903..21371196,21373304..21373478, FT 21374295..21374464,21374970..21375129,21381596..21381773, FT 21382575..21382720,21383222..21383364,21383930..21384106, FT 21395843..21396017,21396271..21396428,21401206..21401318, FT 21417034..21417187,21417909..21418025, FT AL356285.9:11461..11599,AL356285.9:18551..18692, FT AL356285.9:24430..24535,AL356285.9:58504..58644)) FT /gene="XPO4" FT /locus_tag="RP11-261P13.4-001" FT /product="exportin 4" FT /note="match: cDNAs: Em:AB051508 Em:AF145021 Em:AK023108 FT Em:AK057924" FT /note="match: ESTs: Em:AA348215 Em:AA418037 Em:AA418191 FT Em:AA620183 Em:AI407316 Em:AI432206 Em:AI607237 Em:AI915233 FT Em:AJ448598 Em:AL118883 Em:AL121342 Em:AL707038 Em:AU022767 FT Em:AU130751 Em:AV717740 Em:AW361204 Em:AW375610 Em:AW464673 FT Em:AW609500 Em:AW629415 Em:AW645359 Em:BB482129 Em:BB645212 FT Em:BE017777 Em:BE299367 Em:BE507759 Em:BE682511 Em:BE782951 FT Em:BE908978 Em:BF077512 Em:BF289554 Em:BF432637 Em:BF574405 FT Em:BF701913 Em:BF968638 Em:BG486371 Em:BG870219 Em:BI600355 FT Em:BI976353 Em:BJ001604 Em:BM086940 Em:BM227256 Em:BM230095 FT Em:BM719006 Em:BQ217218 Em:BQ227865 Em:BQ309164 Em:N66938" FT CDS complement(join(21357861..21358058,21361104..21361196, FT 21361620..21361737,21362625..21362755,21364601..21364719, FT 21370215..21370395,21370903..21371196,21373304..21373478, FT 21374295..21374464,21374970..21375129,21381596..21381773, FT 21382575..21382720,21383222..21383364,21383930..21384106, FT 21395843..21396017,21396271..21396428,21401206..21401318, FT 21417034..21417187,21417909..21418025, FT AL356285.9:11461..11599,AL356285.9:18551..18692, FT AL356285.9:24430..24535,AL356285.9:58504..58572)) FT /gene="XPO4" FT /locus_tag="RP11-261P13.4-001" FT /standard_name="OTTHUMP00000018105" FT /product="exportin 4" FT /note="match: proteins: Sw:Q9C0E2 Sw:Q9ESJ0" FT /protein_id="CAH71795.1" FT /translation="MMAAALGPPEVIAQLENAAKVLMAPPSMVNNEQRQHAEHIFLSFR FT KSKSPFAVCKHILETSKVDYVLFQAATAIMEAVVREWILLEKGSIESLRTFLLTYVLQR FT PNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTAL FT LSEFSSSSKTSNIGLSMEFHGNCKRVFQEEDLRQIFMLTVEVLQEFSRRENLNAQMSSV FT FQRYLALANQVLSWNFLPPNLGRHYIAMFESSQNVLLKPTESWRETLLDSRVMELFFTV FT HRKIREDSDMAQDSLQCLAQLASLHGPIFPDEGSQVDYLAHFIEGLLNTINGIEIEDSE FT AVGISSIISNLITVFPRNVLTAIPSELFSSFVNCLTHLTCSFGRSAALEEVLDKDDMVY FT MEAYDKLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASR FT EEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEERVTRLHGQLQRHQQQ FT LLASPGSSTVDNKMLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSSEV FT DINTTLQILGSPGEKASSIPGYNRTDSVIRLLSAILRVSEVESRAIRADLTHLLSPQMG FT KDIVWFLKRWAKTYLLVDEKLYDQISLPFSTAFGADTEGSQWIIGYLLQKVISNLSVWS FT SEQDLANDTVQLLVTLVERRERANLVIQCENWWNLAKQFASRSPPLNFLSSPVQRTLMK FT ALVLGGFAHMDTETKQQYWTEVLQPLQQRFLRVINQENFQQMCQQEEVKQEITATLEAL FT CGIAEATQIDNVAILFNFLMDFLTNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLG FT ESKAMNLYEACLTLLQVYSKNNLGRQRIDVTAEEEQYQDLLLIMELLTNLLSKEFIDFS FT DTDEVFRGHEPGQAANRSVSAADVVLYGVNLILPLMSQDLLKFPTLCNQYYKLITFICE FT IFPEKIPQLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEQCAKAQETDSPLFL FT ATRHFLKLVFDMLVLQKHNTEMTTAAGEAFYTLVCLHQAEYSELVETLLSSQQDPVIYQ FT RLADAFNKLTASSTPPTLDRKQKMAFLKSLEEFMANVGGLLCVK" FT mRNA complement(join(21303070..21303355,21305980..21306260, FT 21311862..21311944,21331594..21331756,21347996..21348057)) FT /gene="RP11-261P13.2" FT /locus_tag="RP11-261P13.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:BG707022.1 Em:BX340977.2 FT Em:CR743424.1" FT /note="match: cDNAs: Em:BC018091" FT mRNA complement(join(21296543..21297545,21302419..21302523, FT 21302870..21303355,21305980..21306260,21331594..21331756, FT 21348060..21348088)) FT /gene="RP11-261P13.2" FT /locus_tag="RP11-261P13.2-003" FT /product="novel protein" FT /note="match: cDNAs: Em:AK055408" FT mRNA complement(join(21302870..21303355,21305980..21306260, FT 21311862..21311944,21331594..21331756,21348060..21348088)) FT /gene="RP11-261P13.2" FT /locus_tag="RP11-261P13.2-002" FT /product="novel protein" FT /note="match: ESTs: Em:BG498110" FT mRNA complement(join(21331368..21331756,21348060..21348097)) FT /gene="RP11-261P13.2" FT /locus_tag="RP11-261P13.2-004" FT /product="novel protein" FT /note="match: ESTs: Em:AL597222" FT polyA_site complement(21353014) FT polyA_signal complement(21353027..21353032) FT misc_feature 21360165..21360209 FT /note="Sequence from clone PCR only" FT misc_feature 21368985 FT /note="Clone_left_end: RP11-26D3" FT mRNA join(AL161772.17:115866..115967,AL161772.17:116519..116814, FT 21295775..21297237) FT /gene="IL17D" FT /locus_tag="RP11-261P13.1-001" FT /product="interleukin 17D" FT /note="match: cDNAs: Em:AF458062.1 Em:AY078238.1 FT Em:AY359113.1 Em:BC036243.1" FT /note="match: ESTs: Em:BI561289.1 Em:BI601695.1" FT CDS join(AL161772.17:116525..116814,21295775..21296093) FT /gene="IL17D" FT /locus_tag="RP11-261P13.1-001" FT /standard_name="OTTHUMP00000018104" FT /product="interleukin 17D" FT /note="match: proteins: Sw:Q8TAD2.1 Tr:Q5VUZ7.1" FT /protein_id="CAH71796.1" FT /translation="MLVAGFLLALPPSWAAGAPRAGRRPARPRGCADRPEELLEQLYGR FT LAAGVLSAFHHTLQLGPREQARNASCPAGGRPADRRFRPPTNLRSVSPWAYRISYDPAR FT YPRYLPEAYCLCRGCLTGLFGEEDVRFRSAPVYMPTVVLRRTPACAGGRSVYTEAYVTI FT PVGCTCVPEPEKDADSINSSIDKQGAKLLLGPNDAPAGP" FT mRNA join(AL161772.17:116602..116814,21291237..21291508, FT 21295775..21295824) FT /gene="IL17D" FT /locus_tag="RP11-261P13.1-002" FT /product="interleukin 17D" FT /note="match: ESTs: Em:AI357592" FT misc_feature 21418306 FT /note="Clone_left_end: RP11-569O4" FT misc_feature 21420306..21599903 FT /note="annotated region of clone" FT CDS complement(join(21549009..21549503,21553830..21553936, FT 21555605..21555787,21557363..21557945,21562020..21563443, FT 21565411..21565543,AL161613.23:19921..20262)) FT /gene="LATS2" FT /locus_tag="RP11-569O4.2-001" FT /standard_name="OTTHUMP00000018106" FT /product="LATS, large tumor suppressor, homolog 2 FT (Drosophila)" FT /note="match: proteins: Sw:Q9NRM7.1 Tr:Q5VZE1.1" FT /protein_id="CAI15861.1" FT /translation="MRPKTFPATTYSGNSRQRLQEIREGLKQPSKSSVQGLPAGPNSDT FT SLDAKVLGSKDATRQQQQMRATPKFGPYQKALREIRYSLLPFANESGTSAAAEVNRQML FT QELVNAGCDQEMAGRALKQTGSRSIEAALEYISKMGYLDPRNEQIVRVIKQTSPGKGLM FT PTPVTRRPSFEGTGDSFASYHQLSGTPYEGPSFGADGPTALEEMPRPYVDYLFPGVGPH FT GPGHQHQHPPKGYGASVEAAGAHFPLQGAHYGRPHLLVPGEPLGYGVQRSPSFQSKTPP FT ETGGYASLPTKGQGGPPGAGLAFPPPAAGLYVPHPHHKQAGPAAHQLHVLGSRSQVFAS FT DSPPQSLLTPSRNSLNVDLYELGSTSVQQWPAATLARRDSLQKPGLEAPPRAHVAFRPD FT CPVPSRTNSFNSHQPRPGPPGKAEPSLPAPNTVTAVTAAHILHPVKSVRVLRPEPQTAV FT GPSHPAWVPAPAPAPAPAPAPAAEGLDAKEEHALALGGAGAFPLDVEYGGPDRRCPPPP FT YPKHLLLRSKSEQYDLDSLCAGMEQSLRAGPNEPEGGDKSRKSAKGDKGGKDKKQIQTS FT PVPVRKNSRDEEKRESRIKSYSPYAFKFFMEQHVENVIKTYQQKVNRRLQLEQEMAKAG FT LCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKIKTLGIGAFGEVCLACKVDTHALY FT AMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDSLYFVMDYIPGGDM FT MSLLIRMEVFPEHLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGL FT CTGFRWTHNSKYYQKGSHVRQDSMEPSDLWDDVSNCRCGDRLKTLEQRARKQHQRCLAH FT SLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWEN FT TLHIPAQVKLSPEARDLITKLCCSADHRLGRNGADDLKAHPFFSAIDFSSDIRKQPAPY FT VPTISHPMDTSNFDPVDEESPWNDASEGSTKAWDTLTSPNNKHPEHAFYEFTFRRFFDD FT NGYPFRCPKPSGAEASQAESSDLESSDLVDQTEGCQPVYV" FT mRNA complement(join(21547171..21549503,21553830..21553936, FT 21555605..21555787,21557363..21557945,21562020..21563443, FT 21565411..21565543,AL161613.23:19921..20466, FT AL161613.23:35582..35783)) FT /gene="LATS2" FT /locus_tag="RP11-569O4.2-001" FT /product="LATS, large tumor suppressor, homolog 2 FT (Drosophila)" FT /note="match: cDNAs: Em:AF207547.1" FT /note="match: ESTs: Em:BM706472.1 Em:BQ898648.1 FT Em:CB053505.1 Em:CN359412.1 Em:DA582717.1" FT mRNA complement(join(21429773..21429904,21436856..21436997, FT 21437108..21437262,21442735..21442840,21476809..21477187)) FT /gene="XPO4" FT /locus_tag="RP11-261P13.4-002" FT /product="exportin 4" FT /note="match: cDNAs: Em:AK021022" FT /note="match: ESTs: Em:BB645234 Em:BB659770" FT mRNA complement(join(21442552..21442840,21476809..21476886)) FT /gene="XPO4" FT /locus_tag="RP11-261P13.4-003" FT /product="exportin 4" FT /note="match: ESTs: Em:BB652792" FT mRNA complement(join(AL512652.18:67819..72863, FT AL512652.18:75909..76001,AL512652.18:76425..76542, FT AL512652.18:77430..77560,AL512652.18:79406..79524, FT AL512652.18:85020..85200,AL512652.18:85708..86001, FT AL512652.18:88109..88283,AL512652.18:89100..89269, FT AL512652.18:89775..89934,AL512652.18:96401..96578, FT AL512652.18:97380..97525,AL512652.18:98027..98169, FT AL512652.18:98735..98911,AL512652.18:110648..110822, FT AL512652.18:111076..111233,AL512652.18:116011..116123, FT AL512652.18:131839..131992,AL512652.18:132714..132830, FT 21429766..21429904,21436856..21436997,21442735..21442840, FT 21476809..21476949)) FT /gene="XPO4" FT /locus_tag="RP11-261P13.4-001" FT /product="exportin 4" FT /note="match: cDNAs: Em:AB051508 Em:AF145021 Em:AK023108 FT Em:AK057924" FT /note="match: ESTs: Em:AA348215 Em:AA418037 Em:AA418191 FT Em:AA620183 Em:AI407316 Em:AI432206 Em:AI607237 Em:AI915233 FT Em:AJ448598 Em:AL118883 Em:AL121342 Em:AL707038 Em:AU022767 FT Em:AU130751 Em:AV717740 Em:AW361204 Em:AW375610 Em:AW464673 FT Em:AW609500 Em:AW629415 Em:AW645359 Em:BB482129 Em:BB645212 FT Em:BE017777 Em:BE299367 Em:BE507759 Em:BE682511 Em:BE782951 FT Em:BE908978 Em:BF077512 Em:BF289554 Em:BF432637 Em:BF574405 FT Em:BF701913 Em:BF968638 Em:BG486371 Em:BG870219 Em:BI600355 FT Em:BI976353 Em:BJ001604 Em:BM086940 Em:BM227256 Em:BM230095 FT Em:BM719006 Em:BQ217218 Em:BQ227865 Em:BQ309164 Em:N66938" FT CDS complement(join(AL512652.18:72666..72863, FT AL512652.18:75909..76001,AL512652.18:76425..76542, FT AL512652.18:77430..77560,AL512652.18:79406..79524, FT AL512652.18:85020..85200,AL512652.18:85708..86001, FT AL512652.18:88109..88283,AL512652.18:89100..89269, FT AL512652.18:89775..89934,AL512652.18:96401..96578, FT AL512652.18:97380..97525,AL512652.18:98027..98169, FT AL512652.18:98735..98911,AL512652.18:110648..110822, FT AL512652.18:111076..111233,AL512652.18:116011..116123, FT AL512652.18:131839..131992,AL512652.18:132714..132830, FT 21429766..21429904,21436856..21436997,21442735..21442840, FT 21476809..21476877)) FT /gene="XPO4" FT /locus_tag="RP11-261P13.4-001" FT /standard_name="OTTHUMP00000018105" FT /product="exportin 4" FT /note="match: proteins: Sw:Q9C0E2 Sw:Q9ESJ0" FT /protein_id="CAI15862.1" FT /translation="MMAAALGPPEVIAQLENAAKVLMAPPSMVNNEQRQHAEHIFLSFR FT KSKSPFAVCKHILETSKVDYVLFQAATAIMEAVVREWILLEKGSIESLRTFLLTYVLQR FT PNLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTAL FT LSEFSSSSKTSNIGLSMEFHGNCKRVFQEEDLRQIFMLTVEVLQEFSRRENLNAQMSSV FT FQRYLALANQVLSWNFLPPNLGRHYIAMFESSQNVLLKPTESWRETLLDSRVMELFFTV FT HRKIREDSDMAQDSLQCLAQLASLHGPIFPDEGSQVDYLAHFIEGLLNTINGIEIEDSE FT AVGISSIISNLITVFPRNVLTAIPSELFSSFVNCLTHLTCSFGRSAALEEVLDKDDMVY FT MEAYDKLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASR FT EEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEERVTRLHGQLQRHQQQ FT LLASPGSSTVDNKMLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSSEV FT DINTTLQILGSPGEKASSIPGYNRTDSVIRLLSAILRVSEVESRAIRADLTHLLSPQMG FT KDIVWFLKRWAKTYLLVDEKLYDQISLPFSTAFGADTEGSQWIIGYLLQKVISNLSVWS FT SEQDLANDTVQLLVTLVERRERANLVIQCENWWNLAKQFASRSPPLNFLSSPVQRTLMK FT ALVLGGFAHMDTETKQQYWTEVLQPLQQRFLRVINQENFQQMCQQEEVKQEITATLEAL FT CGIAEATQIDNVAILFNFLMDFLTNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLG FT ESKAMNLYEACLTLLQVYSKNNLGRQRIDVTAEEEQYQDLLLIMELLTNLLSKEFIDFS FT DTDEVFRGHEPGQAANRSVSAADVVLYGVNLILPLMSQDLLKFPTLCNQYYKLITFICE FT IFPEKIPQLPEDLFKSLMYSLELGMTSMSSEVCQLCLEALTPLAEQCAKAQETDSPLFL FT ATRHFLKLVFDMLVLQKHNTEMTTAAGEAFYTLVCLHQAEYSELVETLLSSQQDPVIYQ FT RLADAFNKLTASSTPPTLDRKQKMAFLKSLEEFMANVGGLLCVK" FT CDS complement(join(21495803..21496667,21497039..21497372)) FT /pseudo FT /locus_tag="RP11-569O4.3-001" FT /product="CCR4-NOT transcription complex, subunit 4 (CNOT4) FT pseudogene" FT /note="match: proteins: Sw:O95628 Sw:Q8BT14" FT polyA_signal complement(21522104..21522109) FT CDS complement(join(21522433..21523104,21523414..21523738)) FT /pseudo FT /locus_tag="RP11-569O4.6-001" FT /product="heterogeneous nuclear ribonucleoprotein A1 FT (HNRNPA1) pseudogene" FT /note="match: proteins: Sw:O75116 Sw:O88569 Sw:P04256 FT Sw:P09867 Sw:P17130 Sw:P21522 Sw:P22626 Sw:P48809 Sw:P48810 FT Sw:P51989 Sw:P51990 Sw:P51991 Sw:P70336 Sw:Q13151 Sw:Q14103 FT Sw:Q22037 Sw:Q28521 Sw:Q60668 Sw:Q62868 Sw:Q96DH6 Sw:Q96EP5 FT Sw:Q98SJ2 Sw:Q99383 Sw:Q9JII5 Sw:Q9JJ54 Tr:O14979 Tr:O77798 FT Tr:O94432 Tr:P09651 Tr:P49312 Tr:Q12771 Tr:Q8VZ63 Tr:Q8W034 FT Tr:Q8W569 Tr:Q90626 Tr:Q91920 Tr:Q91ZR9 Tr:Q9BSM5 Tr:Q9FGJ5 FT Tr:Q9FWK8 Tr:Q9HEH4 Tr:Q9SU99 Tr:Q9TTV2 Tr:Q9U5E3 FT Tr:Q9VBQ1" FT mRNA complement(join(21512703..21512789,21514002..21514074, FT 21516280..21516384,21516481..21516739,21521891..21521993, FT 21523444..21523567)) FT /locus_tag="RP11-569O4.7-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG723634" FT misc_feature 21526582 FT /note="Clone_left_end: RP11-22J15" FT misc_feature 21528418 FT /note="Clone_right_end: RP11-26D3" FT CDS complement(21530318..21530582) FT /pseudo FT /locus_tag="RP11-569O4.4-001" FT /product="peptidylprolyl isomerase A (cyclophilin A) (PPIA) FT pseudogene" FT /note="match: proteins: Sw:P14088 Sw:P14851 Sw:P62936 FT Sw:P62941 Sw:Q9TTC6 Tr:O02614 Tr:O24342 Tr:O24343 Tr:Q26018 FT Tr:Q29564 Tr:Q9GK25 Tr:Q9MZD3 Tr:Q9N138" FT CDS 21535449..21536334 FT /pseudo FT /locus_tag="RP11-569O4.5-001" FT /product="Laminin receptor 1 (67kD, ribosomal protein FT SA)(LAMR1) pseudogene" FT /note="match: proteins: Sw:O29132 Sw:P08865 Sw:P29202 FT Sw:P38983 Sw:P38984 Sw:P46769 Sw:P46770 Sw:P46771 Sw:P57713 FT Sw:Q01291 Sw:Q01661 Sw:Q08682 Sw:Q8H173 Sw:Q8U0F0 Sw:Q9P546 FT Sw:Q9Y7L8 Sw:Q9ZSR8 Tr:Q91V31 Tr:Q9CY13 Tr:Q9XZ65" FT misc_feature 21540209..21540248 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT polyA_site complement(21547175) FT polyA_signal complement(21547189..21547194) FT polyA_site complement(21547398) FT polyA_signal complement(21547426..21547431) FT polyA_site complement(21548563) FT polyA_signal complement(21548616..21548621) FT polyA_site complement(21548767) FT polyA_signal complement(21548783..21548788) FT misc_feature 21574025..21574060 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(21579296..21579840,21592175..21592261) FT /locus_tag="RP11-569O4.8-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BE153775" FT misc_feature 21596732..21596833 FT /note="Sequence from overlapping clone AL161613 FT (RP11-22J15). Assembly confirmed by restriction digest" FT mRNA complement(join(21563149..21563443,21565411..21565543, FT 21597202..21597268)) FT /gene="LATS2" FT /locus_tag="RP11-569O4.2-003" FT /product="LATS, large tumor suppressor, homolog 2 FT (Drosophila)" FT /note="match: ESTs: Em:BF062955" FT misc_feature 21599904..21713275 FT /note="annotated region of clone" FT misc_feature 21601903 FT /note="Clone_right_end: RP11-569O4" FT CDS complement(join(AL356285.9:130704..131198, FT AL356285.9:135525..135631,AL356285.9:137300..137482, FT AL356285.9:139058..139640,AL356285.9:143715..145138, FT AL356285.9:147106..147238,21619824..21620165)) FT /gene="LATS2" FT /locus_tag="RP11-569O4.2-001" FT /standard_name="OTTHUMP00000018106" FT /product="LATS, large tumor suppressor, homolog 2 FT (Drosophila)" FT /note="match: proteins: Sw:Q9NRM7.1 Tr:Q5VZE1.1" FT /protein_id="CAH71526.1" FT /translation="MRPKTFPATTYSGNSRQRLQEIREGLKQPSKSSVQGLPAGPNSDT FT SLDAKVLGSKDATRQQQQMRATPKFGPYQKALREIRYSLLPFANESGTSAAAEVNRQML FT QELVNAGCDQEMAGRALKQTGSRSIEAALEYISKMGYLDPRNEQIVRVIKQTSPGKGLM FT PTPVTRRPSFEGTGDSFASYHQLSGTPYEGPSFGADGPTALEEMPRPYVDYLFPGVGPH FT GPGHQHQHPPKGYGASVEAAGAHFPLQGAHYGRPHLLVPGEPLGYGVQRSPSFQSKTPP FT ETGGYASLPTKGQGGPPGAGLAFPPPAAGLYVPHPHHKQAGPAAHQLHVLGSRSQVFAS FT DSPPQSLLTPSRNSLNVDLYELGSTSVQQWPAATLARRDSLQKPGLEAPPRAHVAFRPD FT CPVPSRTNSFNSHQPRPGPPGKAEPSLPAPNTVTAVTAAHILHPVKSVRVLRPEPQTAV FT GPSHPAWVPAPAPAPAPAPAPAAEGLDAKEEHALALGGAGAFPLDVEYGGPDRRCPPPP FT YPKHLLLRSKSEQYDLDSLCAGMEQSLRAGPNEPEGGDKSRKSAKGDKGGKDKKQIQTS FT PVPVRKNSRDEEKRESRIKSYSPYAFKFFMEQHVENVIKTYQQKVNRRLQLEQEMAKAG FT LCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKIKTLGIGAFGEVCLACKVDTHALY FT AMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDSLYFVMDYIPGGDM FT MSLLIRMEVFPEHLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGL FT CTGFRWTHNSKYYQKGSHVRQDSMEPSDLWDDVSNCRCGDRLKTLEQRARKQHQRCLAH FT SLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWEN FT TLHIPAQVKLSPEARDLITKLCCSADHRLGRNGADDLKAHPFFSAIDFSSDIRKQPAPY FT VPTISHPMDTSNFDPVDEESPWNDASEGSTKAWDTLTSPNNKHPEHAFYEFTFRRFFDD FT NGYPFRCPKPSGAEASQAESSDLESSDLVDQTEGCQPVYV" FT mRNA complement(join(21619838..21620367,21635485..21635718)) FT /gene="LATS2" FT /locus_tag="RP11-569O4.2-002" FT /product="LATS, large tumor suppressor, homolog 2 FT (Drosophila)" FT /note="match: ESTs: Em:BB573626 Em:BB613844 Em:BB616191 FT Em:BB616371 Em:BB640452 Em:BB647562 Em:BI662157 FT Em:BI733369" FT mRNA complement(join(AL356285.9:128866..131198, FT AL356285.9:135525..135631,AL356285.9:137300..137482, FT AL356285.9:139058..139640,AL356285.9:143715..145138, FT AL356285.9:147106..147238,21619824..21620369, FT 21635485..21635686)) FT /gene="LATS2" FT /locus_tag="RP11-569O4.2-001" FT /product="LATS, large tumor suppressor, homolog 2 FT (Drosophila)" FT /note="match: cDNAs: Em:AF207547.1" FT /note="match: ESTs: Em:BM706472.1 Em:BQ898648.1 FT Em:CB053505.1 Em:CN359412.1 Em:DA582717.1" FT CDS complement(21668457..21668853) FT /pseudo FT /locus_tag="RP11-22J15.2-001" FT /product="ribosomal protein S12 (RPS12) pseudogene" FT /note="match: proteins: Sw:P46405 Sw:P47840 Sw:P63324 FT Sw:Q9SKZ3 Sw:Q9SKZ3 Tr:Q6ZWZ6 Tr:Q6ZWZ6 Tr:Q6ZWZ6 Tr:Q76M58 FT Tr:Q76M58 Tr:Q76M58 Tr:Q8T9N6 Tr:Q90YR2" FT CDS complement(join(21677142..21677445,21677721..21677907, FT 21678234..21678510)) FT /pseudo FT /locus_tag="RP11-22J15.3-001" FT /product="chromosome 9 open reading frame 12 (C9orf12) FT pseudogene" FT /note="match: proteins: Sw:Q9H8X2 Sw:Q9H8X2" FT misc_feature 21711276 FT /note="Clone_left_end: RP11-101P17" FT misc_feature 21713276..21883279 FT /note="annotated region of clone" FT mRNA join(21714653..21714820,21715025..21715134, FT 21720944..21721066,21721325..21723221) FT /gene="SAP18" FT /locus_tag="RP11-101P17.13-002" FT /product="Sin3A-associated protein, 18kDa" FT /note="match: ESTs: Em:CD703604.1 Em:DA000160.1 FT Em:DB171768.1" FT /note="match: cDNAs: Em:BC030836.1 Em:CR590892.1 FT Em:CR592416.1 Em:CR608964.1 Em:CR625423.1" FT mRNA join(21714728..21714820,21715025..21715100, FT 21715174..21715630) FT /gene="SAP18" FT /locus_tag="RP11-101P17.13-003" FT /product="Sin3A-associated protein, 18kDa" FT /note="match: ESTs: Em:AA346556 Em:AW953048" FT CDS join(21714749..21714820,21715025..21715134, FT 21720944..21721066,21721325..21721481) FT /gene="SAP18" FT /locus_tag="RP11-101P17.13-002" FT /standard_name="OTTHUMP00000018107" FT /product="Sin3A-associated protein, 18kDa" FT /note="match: proteins: Sw:O00422.1 Sw:O55128.1 Sw:Q3T022.1 FT Sw:Q5RDT5.1 Tr:Q2TTR4.1 Tr:Q90ZH5.1" FT /protein_id="CAH69949.1" FT /translation="MAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDE FT FSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDVKRPGYRVK FT EIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPPSGRMRPY" FT mRNA join(21714751..21714820,21715025..21715758) FT /gene="SAP18" FT /locus_tag="RP11-101P17.13-004" FT /product="Sin3A-associated protein, 18kDa" FT /note="match: ESTs: Em:BI819134" FT mRNA join(21714754..21714820,21715025..21715134, FT 21721325..21721552) FT /gene="SAP18" FT /locus_tag="RP11-101P17.13-006" FT /product="Sin3A-associated protein, 18kDa" FT /note="match: ESTs: Em:BF395563 Em:BI280479" FT mRNA join(21715025..21715134,21720944..21721066, FT 21721306..21721742) FT /gene="SAP18" FT /locus_tag="RP11-101P17.13-005" FT /product="Sin3A-associated protein, 18kDa" FT /note="match: ESTs: Em:AI701117" FT mRNA join(21720603..21721066,21721325..21721530) FT /gene="SAP18" FT /locus_tag="RP11-101P17.13-001" FT /product="Sin3A-associated protein, 18kDa" FT /note="match: ESTs: Em:BQ016555" FT polyA_signal 21721477..21721482 FT polyA_site 21721492 FT polyA_site 21721494 FT polyA_site 21721503 FT polyA_signal 21721724..21721729 FT polyA_site 21721741 FT polyA_signal 21722469..21722474 FT polyA_site 21722494 FT polyA_signal 21722955..21722960 FT polyA_site 21722977 FT polyA_signal 21723198..21723203 FT polyA_site 21723216 FT polyA_site 21723221 FT polyA_site complement(21727734) FT polyA_signal complement(21727752..21727757) FT polyA_site complement(21728025) FT polyA_site complement(21728048) FT polyA_signal complement(21728060..21728065) FT misc_feature 21728908 FT /note="Clone_right_end: RP11-22J15" FT CDS complement(join(21729289..21729289,21729832..21729950, FT 21732061..21732264,21734041..21734126,21735929..21736014, FT 21742127..21742538,21746478..21746562)) FT /gene="C13orf3" FT /locus_tag="RP11-101P17.12-005" FT /standard_name="OTTHUMP00000018108" FT /product="chromosome 13 open reading frame 3" FT /protein_id="CAH69950.1" FT /translation="MEKNSMDIMKIREYFQKYGYSPRVKKNSVHEQEAINSDPELSNCE FT NFQKTDVKDDLSDPPVASSCISEKSPRSPQLSDFGLERYIVSQVLPNPPQAVNNYKEEP FT VIVTPPTKQSLVKVLKTPKCALKMDDFECVTPKLEHFGISEYTMCLNEDYTMGLKNARN FT NKSEEAIDTESRLNDNVFATPSPIIQQLEKSDAEYTNSPLVPTFCTPGLKIPSTKNSIA FT LVSTNYPLSKTNSSSNDLEVEDRTSLVLNSDTCFENLTDPSSPTISSYENLLRTPTPPE FT VTKIPEDILQLLSKYNSNLATPIAIKAVPPSKRFLKHGQNIRDVSNKEN" FT misc_feature 21748871 FT /note="Clone_left_end: RP11-274L20" FT mRNA complement(join(21735929..21736014,21742127..21742538, FT 21746478..21746643,21746759..21746820,21750487..21750690)) FT /gene="C13orf3" FT /locus_tag="RP11-101P17.12-001" FT /product="chromosome 13 open reading frame 3" FT /note="match: ESTs: Em:AL519504 Em:AW238816 Em:BI195674 FT Em:BQ212289" FT mRNA complement(join(21728836..21729289,21729832..21729950, FT 21750514..21750690)) FT /gene="C13orf3" FT /locus_tag="RP11-101P17.12-002" FT /product="chromosome 13 open reading frame 3" FT /note="match: ESTs: Em:AI990227 Em:BF509033 Em:BF541522" FT mRNA complement(join(21727734..21729289,21729832..21729950, FT 21732061..21732264,21734041..21734126,21735929..21736014, FT 21742127..21742538,21746478..21746643,21750514..21750687)) FT /gene="C13orf3" FT /locus_tag="RP11-101P17.12-005" FT /product="chromosome 13 open reading frame 3" FT /note="match: ESTs: Em:AA278591 Em:AA278865 Em:AA729028 FT Em:AI037931 Em:AI199354 Em:AI291972 Em:AI313222 Em:AI362963 FT Em:AI371153 Em:AI374769 Em:AI417671 Em:AI634049 Em:AI652293 FT Em:AI699649 Em:AI829603 Em:AI860573 Em:AJ394562 Em:AL519503 FT Em:AL582382 Em:AW237185 Em:AW340069 Em:AW664945 Em:BE389593 FT Em:BE391381 Em:BE842858 Em:BE890684 Em:BF316732 Em:BF430974 FT Em:BF600621 Em:BF907591 Em:BF970021 Em:BG086132 Em:BG105671 FT Em:BG168841 Em:BG206661 Em:BG259952 Em:BG392826 Em:BG419330 FT Em:BG822985 Em:BI681866 Em:BM015248 Em:BM740763 Em:BM742972 FT Em:BQ218067 Em:BQ278705" FT /note="match: cDNAs: Em:BC013418" FT mRNA complement(join(21727734..21729289,21729832..21729950, FT 21732061..21732264,21734041..21734126,21735929..21736014, FT 21742127..21742538,21746478..21746643,21746759..21746820, FT 21750514..21750710)) FT /gene="C13orf3" FT /locus_tag="RP11-101P17.12-007" FT /product="chromosome 13 open reading frame 3" FT /note="match: ESTs: Em:BG206661.1 Em:BG392826.1 FT Em:BG721796.1 Em:BU506973.1" FT /note="match: cDNAs: Em:AF361358.1 Em:BC048988.1" FT CDS complement(join(21729289..21729289,21729832..21729950, FT 21732061..21732264,21734041..21734126,21735929..21736014, FT 21742127..21742538,21746478..21746643,21746759..21746820, FT 21750514..21750616)) FT /gene="C13orf3" FT /locus_tag="RP11-101P17.12-007" FT /standard_name="OTTHUMP00000176878" FT /product="chromosome 13 open reading frame 3" FT /note="match: proteins: Sw:Q8IX90.2" FT /protein_id="CAM13059.1" FT /translation="MDPIRSFCGKLRSLASTLDCETARLQRALDGEESDFEDYPMRILY FT DLHSEVQTLKDDVNILLDKARLENQEGIDFIKATKVLMEKNSMDIMKIREYFQKYGYSP FT RVKKNSVHEQEAINSDPELSNCENFQKTDVKDDLSDPPVASSCISEKSPRSPQLSDFGL FT ERYIVSQVLPNPPQAVNNYKEEPVIVTPPTKQSLVKVLKTPKCALKMDDFECVTPKLEH FT FGISEYTMCLNEDYTMGLKNARNNKSEEAIDTESRLNDNVFATPSPIIQQLEKSDAEYT FT NSPLVPTFCTPGLKIPSTKNSIALVSTNYPLSKTNSSSNDLEVEDRTSLVLNSDTCFEN FT LTDPSSPTISSYENLLRTPTPPEVTKIPEDILQLLSKYNSNLATPIAIKAVPPSKRFLK FT HGQNIRDVSNKEN" FT mRNA complement(join(21727734..21729289,21732061..21732264, FT 21734041..21734126,21735929..21736014,21742127..21742538, FT 21746478..21746643,21746759..21746820,21750514..21750686)) FT /gene="C13orf3" FT /locus_tag="RP11-101P17.12-008" FT /product="chromosome 13 open reading frame 3" FT /note="match: ESTs: Em:BG493225.1 Em:CN403721.1" FT /note="match: cDNAs: Em:AK090584.1 Em:AX746521.1" FT CDS complement(join(21729242..21729289,21732061..21732264, FT 21734041..21734126,21735929..21736014,21742127..21742538, FT 21746478..21746643,21746759..21746820,21750514..21750616)) FT /gene="C13orf3" FT /locus_tag="RP11-101P17.12-008" FT /standard_name="OTTHUMP00000176879" FT /product="chromosome 13 open reading frame 3" FT /protein_id="CAM13060.1" FT /translation="MDPIRSFCGKLRSLASTLDCETARLQRALDGEESDFEDYPMRILY FT DLHSEVQTLKDDVNILLDKARLENQEGIDFIKATKVLMEKNSMDIMKIREYFQKYGYSP FT RVKKNSVHEQEAINSDPELSNCENFQKTDVKDDLSDPPVASSCISEKSPRSPQLSDFGL FT ERYIVSQVLPNPPQAVNNYKEEPVIVTPPTKQSLVKVLKTPKCALKMDDFECVTPKLEH FT FGISEYTMCLNEDYTMGLKNARNNKSEEAIDTESRLNDNVFATPSPIIQQLEKSDAEYT FT NSPLVPTFCTPGLKIPSTKNSIALVSTNYPLSKTNSSSNDLEVEDRTSLVLNSDTCFEN FT LTDPSSPTISSYENLLRTPTPPEVTKIPEDILQKFQWIYPTQKLNKMR" FT mRNA complement(join(21746408..21746643,21746759..21746820, FT 21750514..21750612)) FT /gene="C13orf3" FT /locus_tag="RP11-101P17.12-003" FT /product="chromosome 13 open reading frame 3" FT /note="match: ESTs: Em:AI272508" FT mRNA join(21750784..21750856,21751051..21753223) FT /gene="MRP63" FT /locus_tag="RP11-101P17.4-001" FT /product="mitochondrial ribosomal protein 63" FT /note="match: ESTs: Em:BG773624.1 Em:BU148955.1 FT Em:BU681712.1" FT /note="match: cDNAs: Em:BC023616.2 Em:BC068492.1" FT mRNA complement(join(21877651..21877959,AL139380.6:2002..2078, FT AL139380.6:3111..3325,AL139380.6:3411..3515, FT AL139380.6:21534..21618,AL139380.6:35626..35746, FT AL139380.6:38272..38499,AL139380.6:39643..39681)) FT /locus_tag="RP11-101P17.9-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA412609 Em:AA417161 Em:AI149050 FT Em:AI206458 Em:BF185586 Em:BQ007438 Em:BQ012787 Em:BQ013768 FT Em:N29332" FT CDS 21751056..21751364 FT /gene="MRP63" FT /locus_tag="RP11-101P17.4-001" FT /standard_name="OTTHUMP00000176880" FT /product="mitochondrial ribosomal protein 63" FT /note="match: proteins: Sw:Q3ZC04.1 Sw:Q9BQC6.1 FT Sw:Q9CQF8.1" FT /protein_id="CAM13061.1" FT /translation="MFLTALLWRGRIPGRQWIGKHRRPRFVSLRAKQNMIRRLEIEAEN FT HYWLSMPYMTREQERGHAAVRRREAFEAIKAAATSKFPPHRFIADQLDHLNVTKKWS" FT polyA_signal 21751631..21751636 FT polyA_site 21751651 FT polyA_signal 21753201..21753206 FT polyA_signal 21753206..21753211 FT polyA_site 21753223 FT misc_feature 21759586 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 100bp by restriction digest data" FT misc_feature 21763428..21763508 FT /note="Sequence from overlapping clone RP11-274L20 FT (AL355600). Assembly confirmed by restriction digest" FT misc_feature 21801386..21801449 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm assembly" FT mRNA join(21808707..21808792,21809025..21809343) FT /locus_tag="RP11-101P17.10-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW117237" FT mRNA join(21834168..21834228,21836612..21836713, FT 21852188..21852241,21854408..21854461,21865513..21865682, FT 21866820..21866982,21867552..21867568) FT /locus_tag="RP11-101P17.6-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AL042800" FT CDS 21834171..21835719 FT /pseudo FT /locus_tag="RP11-101P17.5-001" FT /product="estrogen-related receptor alpha (ESRRA) FT pseudogene" FT /note="match: proteins: Sw:O08537 Sw:O08580 Sw:O09018 FT Sw:O93511 Sw:O95718 Sw:P03372 Sw:P06211 Sw:P06212 Sw:P10589 FT Sw:P11474 Sw:P11475 Sw:P16375 Sw:P19785 Sw:P19793 Sw:P24468 FT Sw:P28700 Sw:P28701 Sw:P28702 Sw:P33244 Sw:P43135 Sw:P48443 FT Sw:P49867 Sw:P50240 Sw:P50241 Sw:P57717 Sw:P57783 Sw:P62509 FT Sw:Q05343 Sw:Q29040 Sw:Q60632 Sw:Q61539 Sw:Q62986 Sw:Q90415 FT Sw:Q90416 Sw:Q90733 Sw:Q91250 Sw:Q92731 Sw:Q95171 Sw:Q9IAL9 FT Sw:Q9PTU5 Sw:Q9PVE2 Sw:Q9PVZ9 Sw:Q9QZJ5 Sw:Q9TTR8 Sw:Q9TU15 FT Sw:Q9XSB5 Sw:Q9XSW2 Sw:Q9YH33 Sw:Q9YHZ7 Tr:O61449 Tr:P43135 FT Tr:Q62681 Tr:Q6LC96 Tr:Q6LDB2 Tr:Q7LCB3 Tr:Q8QGX5 Tr:Q8QHL0 FT Tr:Q8T5C6 Tr:Q8UWA9 Tr:Q8UWB0 Tr:Q8WS79 Tr:Q90WH6 Tr:Q90WS9 FT Tr:Q90WV1 Tr:Q91430 Tr:Q91Z86 Tr:Q95L13 Tr:Q95L53 Tr:Q96I02 FT Tr:Q9HCB2 Tr:Q9IBD5 Tr:Q9U7D9 Tr:Q9VSE9 Tr:Q9W745" FT mRNA join(21861545..21862095,21868872..21868997) FT /locus_tag="RP11-101P17.11-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI018012" FT misc_feature 21863932 FT /note="Clone_left_end: RP11-463M3" FT mRNA join(21872278..21872335,21875558..21875757, FT 21878606..21878694) FT /locus_tag="RP11-101P17.7-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG940872" FT CDS join(21872398..21872578,21875558..21875594, FT 21875621..21875757,21880424..21880512) FT /pseudo FT /locus_tag="RP11-101P17.8-001" FT /product="pseudogene similar to part of mitochondrial FT intermediate peptidase (MIPEP)" FT /note="match: proteins: Sw:Q01992 Sw:Q99797 Tr:Q96G65" FT misc_feature 21881279 FT /note="Clone_right_end: RP11-101P17" FT misc_feature 21883280..21928976 FT /note="annotated region of clone" FT CDS 21893295..21895005 FT /pseudo FT /locus_tag="RP11-463M3.1-001" FT /product="G protein-coupled receptor kinase 6 (GRK6) FT pseudogene" FT /note="match: proteins: Sw:O70293 Sw:O70293 Sw:P21146 FT Sw:P25098 Sw:P26818 Sw:P26819 Sw:P28327 Sw:P32298 Sw:P32866 FT Sw:P35626 Sw:P43249 Sw:P43250 Sw:P43250 Sw:P70507 Sw:P97711 FT Sw:Q09537 Sw:Q15835 Sw:Q62833 Sw:Q64682 Sw:Q8VEB1 Sw:Q8VEB1 FT Sw:Q8WP15 Sw:Q8WTQ7 Sw:Q99MK8 Sw:Q9Z2G7 Tr:O70296 Tr:O73685 FT Tr:O97020 Tr:O97627 Tr:P97548 Tr:P97549 Tr:Q8WMV0 Tr:Q96AD6 FT Tr:Q9EP84 Tr:Q9LE81 Tr:Q9N2R0" FT mRNA complement(join(21897408..21897841,21904713..21904797, FT 21918805..21918984)) FT /locus_tag="RP11-101P17.9-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BG498557 Em:N57024" FT mRNA complement(join(21899764..21899954,21904713..21904797, FT 21918805..21918925,21921451..21921678,21922822..21922860)) FT /locus_tag="RP11-101P17.9-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AA412274 Em:AA446313 Em:AA446493" FT mRNA complement(join(AL158032.32:166376..166684, FT 21885181..21885257,21886290..21886504,21886590..21886694, FT 21904713..21904797,21918805..21918925,21921451..21921678, FT 21922822..21922860)) FT /locus_tag="RP11-101P17.9-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA412609 Em:AA417161 Em:AI149050 FT Em:AI206458 Em:BF185586 Em:BQ007438 Em:BQ012787 Em:BQ013768 FT Em:N29332" FT misc_feature 21928777 FT /note="Clone_left_end: RP11-149B7" FT misc_feature 21928977..22096706 FT /note="annotated region of clone" FT CDS 21932512..21933450 FT /pseudo FT /locus_tag="RP11-149B7.1-001" FT /product="glyceraldehyde-3-phosphate dehydrogenase (GAPDH) FT pseudogene" FT /note="match: proteins: Sw:O43026 Sw:O57479 Sw:O59841 FT Sw:P00355 Sw:P00356 Sw:P00359 Sw:P04406 Sw:P04796 Sw:P04797 FT Sw:P04970 Sw:P07486 Sw:P07486 Sw:P07486 Sw:P07487 Sw:P09317 FT Sw:P0A1P0 Sw:P0A9B5 Sw:P10096 Sw:P10097 Sw:P16858 Sw:P17244 FT Sw:P17329 Sw:P17330 Sw:P17331 Sw:P19089 Sw:P20287 Sw:P25858 FT Sw:P25858 Sw:P26521 Sw:P32636 Sw:P32638 Sw:P32809 Sw:P32810 FT Sw:P34920 Sw:P34922 Sw:P34923 Sw:P35143 Sw:P46406 Sw:P49644 FT Sw:P51469 Sw:P52694 Sw:P54117 Sw:P54270 Sw:P55070 Sw:P56649 FT Sw:P78958 Sw:P80534 Sw:P87197 Sw:Q00640 Sw:Q01077 Sw:Q01558 FT Sw:Q01597 Sw:Q05025 Sw:Q12552 Sw:Q27652 Sw:Q28259 Sw:Q28554 FT Sw:Q59199 Sw:Q8X1X3 Sw:Q92243 Sw:Q96UF1 Sw:Q96UF2 Sw:Q9HFX1 FT Sw:Q9HFX1 Sw:Q9N2D5 Sw:Q9Y796 Sw:Q9Y8E9 Tr:O01373 Tr:O04231 FT Tr:O04863 Tr:O62780 Tr:O96369 Tr:Q27776 Tr:Q712W6 Tr:Q8T6B1 FT Tr:Q8VXE0 Tr:Q8VXM4 Tr:Q8VXN7 Tr:Q8ZEK8 Tr:Q90WD9 Tr:Q90Z48 FT Tr:Q90ZF1 Tr:Q99N41 Tr:Q9C1F0 Tr:Q9C1F1 Tr:Q9FX54 Tr:Q9M7R3 FT Tr:Q9M7R5 Tr:Q9N9Y3 Tr:Q9NL56 Tr:Q9PG45 Tr:Q9PTW5 Tr:Q9QWU4 FT Tr:Q9TUX5 Tr:Q9TUY2 Tr:Q9X6Z1 Tr:Q9XG67" FT mRNA join(21947808..21948423,21950684..21950797) FT /locus_tag="RP11-149B7.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AV714697" FT mRNA complement(join(21951116..21951347,21951806..21952013)) FT /locus_tag="RP11-149B7.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BE042745" FT mRNA complement(join(21955573..21955688,21956040..21956133)) FT /locus_tag="RP11-149B7.2-004" FT /product="novel protein" FT /note="match: ESTs: Em:AW659983" FT mRNA complement(join(21950486..21950794,21955573..21955685, FT 21957059..21957148,21961647..21961696)) FT /locus_tag="RP11-149B7.2-002" FT /product="novel protein" FT /note="match: ESTs: Em:AA454190 Em:AI640293 Em:AI914541 FT Em:BE000640 Em:BG954238" FT mRNA complement(join(21950654..21950794,21955573..21955688, FT 21956040..21956084,21957059..21957148,21961647..21961773, FT 21964334..21964393)) FT /locus_tag="RP11-149B7.2-003" FT /product="novel protein" FT /note="match: ESTs: Em:AA454189 Em:BE863519" FT mRNA complement(join(21950658..21950794,21955573..21955688, FT 21957059..21957148,21961647..21961773,21965861..21965993, FT 21974512..21974632,21975792..21975824,21976936..21977005, FT 21987791..21987911,21995200..21995246)) FT /locus_tag="RP11-149B7.2-006" FT /product="novel protein" FT /note="match: ESTs: Em:BM807303" FT misc_feature 22002380..22002566 FT /note="Sequence from overlapping clone AL139380. Contains FT 10bp single clone. Assembly confirmed by restriction FT digest" FT misc_feature 22002637..22002653 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA complement(join(22084166..22084240,22088492..22088557, FT 22095384..22095466,AL138680.15:136..183, FT AL138680.15:16835..16910,AL138680.15:17190..17221, FT AL138680.15:44330..44477,AL138680.15:60407..60456, FT AL138680.15:81107..81244)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-006" FT /product="EF-hand domain family, member A1" FT /note="match: ESTs: Em:BI461558 Em:BI464643" FT mRNA complement(join(22066839..22067492,22069300..22069457, FT 22070191..22070299,22077065..22077236,22084143..22084240, FT 22088492..22088557,22095384..22095466,AL138680.15:136..183, FT AL138680.15:16835..16910,AL138680.15:17190..17221, FT AL138680.15:44330..44477,AL138680.15:81472..81747)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-001" FT /product="EF-hand domain family, member A1" FT /note="match: ESTs: Em:AL548876.3 Em:BG718051.1 FT Em:BI460185.1 Em:BP348737.1 Em:BQ632783.1 Em:CX781075.1" FT /note="match: cDNAs: Em:BC031089 Em:BC034965.1 FT Em:CR600850.1 Em:CR613170.1" FT CDS complement(join(22067388..22067492,22069300..22069457, FT 22070191..22070299,22077065..22077236,22084143..22084240, FT 22088492..22088557,22095384..22095466,AL138680.15:136..183, FT AL138680.15:16835..16910,AL138680.15:17190..17221, FT AL138680.15:44330..44477,AL138680.15:81472..81681)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-001" FT /standard_name="OTTHUMP00000070404" FT /product="EF-hand domain family, member A1" FT /note="match: proteins: Tr:Q8IYU8.1 Tr:Q8N0T6.1" FT /protein_id="CAH70594.1" FT /translation="MAAAAGSCARVAAWGGKLRRGLAVSRQAVRSPGPLAAAVAGAALA FT GAGAAWHHSRVSVAARDGSFTVSAQKNVEHGIIYIGKPSLRKQRFMQFSSLEHEGEYYM FT TPRDFLFSVMFEQMERKTSVKKLTKKDIEDTLSGIQTAGCGSTFFRDLGDKGLISYTEY FT LFLLTILTKPHSGFHVAFKMLDTDGNEMIEKREFFKLQKIISKQDDLMTVKTNETGYQE FT AIVKEPEINTTLQMRFFGKRGQRKLHYKEFRRFMENLQTEIQEMEFLQFSKGLSFMRKE FT DFAEWLLFFTNTENKDIYWKNVREKLSAGESISLDEFKSFCHFTTHLEDFAIAMQMFSL FT AHRPVRLAEFKRAVKVATGQELSNNILDTVFKIFDLDGDECLSHEEFLGVLKNRMHRGL FT WVPQHQSIQEYWKCVKKESIKGVKEVWKQAGKGLF" FT mRNA complement(join(22084222..22084240,22088492..22088557, FT 22089673..22089700,22095384..22095466,AL138680.15:136..183, FT AL138680.15:16835..16910,AL138680.15:17190..17221, FT AL138680.15:44330..44477,AL138680.15:81472..81714)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-002" FT /product="EF-hand domain family, member A1" FT /note="match: ESTs: Em:BI458567" FT mRNA complement(join(22084166..22084240,22088492..22088557, FT 22095384..22095466,AL138680.15:136..183, FT AL138680.15:16835..16910,AL138680.15:17190..17221, FT AL138680.15:44330..44477,AL138680.15:80277..80351, FT AL138680.15:81472..81698)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-005" FT /product="EF-hand domain family, member A1" FT /note="match: ESTs: Em:BI559746 Em:BI559747" FT mRNA complement(join(21950263..21950794,21952800..21952877, FT 21955573..21955688,21957059..21957148,21961647..21961773, FT 21965861..21965993,21974512..21974632,21975792..21975824, FT 21976936..21977005,21987791..21987911,21995200..21995303, FT 21999791..21999817,22033193..22033509)) FT /locus_tag="RP11-149B7.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA396522 Em:AB040396 Em:AI194396 FT Em:AI225893 Em:AI225894 Em:AI280369 Em:AL525416 Em:AL584415 FT Em:AL653223 Em:AL679867 Em:AU131312 Em:AV985289 Em:AW340676 FT Em:AW505552 Em:AW589790 Em:BB620472 Em:BB644535 Em:BB651876 FT Em:BB776905 Em:BB848667 Em:BB850310 Em:BB857698 Em:BB863089 FT Em:BE380418 Em:BF011472 Em:BF012817 Em:BF044352 Em:BF177950 FT Em:BF513515 Em:BG088098 Em:BG100046 Em:BG662918 Em:BG720734 FT Em:BI248797 Em:BI251249 Em:BI402473 Em:BI404386 Em:BI464803 FT Em:BI561688 Em:BI691477 Em:BI986566 Em:BM807957 Em:BQ176846 FT Em:H53968 Em:N24022 Em:N35416" FT /note="match: cDNAs: Em:AK017158 Em:AK023167 Em:BC019536" FT CDS complement(join(21952840..21952877,21955573..21955688, FT 21957059..21957148,21961647..21961773,21965861..21965993, FT 21974512..21974632,21975792..21975824,21976936..21977005, FT 21987791..21987911,21995200..21995303,21999791..21999817, FT 22033193..22033310)) FT /locus_tag="RP11-149B7.2-001" FT /standard_name="OTTHUMP00000018802" FT /product="novel protein" FT /note="match: proteins: Sw:Q5Y5T1 Sw:Q5Y5T1" FT /protein_id="CAH70596.1" FT /translation="MAPWTLWRCCQRVVGWVPVLFITFVVVWSYYAYVVELCVFTIFGN FT EENGKTVVYLVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQ FT EILRRAARALPIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCV FT GFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFWTNELTDTRAKFHVLFLFFVSAMFFI FT SVLSLFSYHCWLVGKNRTTIESFRAPTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLP FT IFSSLGDGCSFPTRLVGMDPEQASVTNQNEYARSSGSNQPFPIKPLSESKNRLLDSESQ FT WLENGAEEGIVKSGTNNHVTVAIEN" FT misc_feature 22046611 FT /note="Clone_right_end: RP11-463M3" FT polyA_signal complement(22057248..22057253) FT CDS complement(22057973..22058313) FT /pseudo FT /locus_tag="RP11-149B7.4-001" FT /product="H2B histone family, member H (H2BFH) pseudogene" FT /note="match: proteins: Sw:P02281 Sw:P02283 Sw:P14001 FT Sw:P17271 Sw:P19374 Sw:P33778 Sw:P35068 Sw:P62807 Sw:P62807 FT Sw:P62808 Sw:P69070 Sw:Q00729 Sw:Q00729 Sw:Q8CGP2 Sw:Q93079 FT Sw:Q99877 Sw:Q99877 Sw:Q99879 Sw:Q9ZUS0 Tr:Q92130 FT Tr:Q963G1" FT polyA_site complement(22066830) FT polyA_signal complement(22066852..22066857) FT mRNA complement(join(22067243..22067492,22069300..22069457, FT 22070191..22070791)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-003" FT /product="EF-hand domain family, member A1" FT /note="match: ESTs: Em:AA465556 Em:BG401337 Em:BG402543 FT Em:BQ429379" FT mRNA complement(join(22067076..22067492,22069300..22069457, FT 22077065..22077237)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-004" FT /product="EF-hand domain family, member A1" FT /note="match: ESTs: Em:BG202856" FT mRNA complement(join(22066836..22067492,22069300..22070299, FT 22077065..22077212)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-008" FT /product="EF-hand domain family, member A1" FT /note="match: ESTs: Em:BF339170" FT /note="match: cDNAs: Em:AK057745" FT misc_feature 22084580 FT /note="Clone_left_end: RP11-110K8" FT mRNA complement(join(22076966..22077236,22084143..22084240, FT 22088492..22088557,22089673..22089800)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-007" FT /product="EF-hand domain family, member A1" FT /note="match: ESTs: Em:AI789044 Em:AV042404 Em:BI596340" FT misc_feature 22096606 FT /note="Clone_right_end: RP11-149B7" FT misc_feature 22096707..22191699 FT /note="annotated region of clone" FT CDS 22104829..22105462 FT /pseudo FT /locus_tag="RP11-110K8.1-001" FT /product="farnesyltransferase, CAAX box, alpha (FNTA) FT pseudogene" FT /note="match: proteins: Sw:P29702 Sw:P49354 Sw:Q04631 FT Sw:Q61239 Sw:Q61239 Tr:Q541Z2 Tr:Q9MZF6 Tr:Q9VR31" FT polyA_signal 22105948..22105953 FT mRNA complement(join(AL136219.17:155290..155364, FT AL136219.17:159616..159681,AL136219.17:166508..166590, FT 22096742..22096789,22113441..22113516,22113796..22113827, FT 22140936..22141083,22157013..22157062,22177713..22177850)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-006" FT /product="EF-hand domain family, member A1" FT /note="match: ESTs: Em:BI461558 Em:BI464643" FT mRNA complement(join(AL136219.17:137963..138616, FT AL136219.17:140424..140581,AL136219.17:141315..141423, FT AL136219.17:148189..148360,AL136219.17:155267..155364, FT AL136219.17:159616..159681,AL136219.17:166508..166590, FT 22096742..22096789,22113441..22113516,22113796..22113827, FT 22140936..22141083,22178078..22178353)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-001" FT /product="EF-hand domain family, member A1" FT /note="match: cDNAs: Em:BC031089 Em:BC034965.1 FT Em:CR600850.1 Em:CR613170.1" FT /note="match: ESTs: Em:AL548876.3 Em:BG718051.1 FT Em:BI460185.1 Em:BP348737.1 Em:BQ632783.1 Em:CX781075.1" FT CDS complement(join(AL136219.17:138512..138616, FT AL136219.17:140424..140581,AL136219.17:141315..141423, FT AL136219.17:148189..148360,AL136219.17:155267..155364, FT AL136219.17:159616..159681,AL136219.17:166508..166590, FT 22096742..22096789,22113441..22113516,22113796..22113827, FT 22140936..22141083,22178078..22178287)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-001" FT /standard_name="OTTHUMP00000070404" FT /product="EF-hand domain family, member A1" FT /note="match: proteins: Tr:Q8IYU8.1 Tr:Q8N0T6.1" FT /protein_id="CAH70136.1" FT /translation="MAAAAGSCARVAAWGGKLRRGLAVSRQAVRSPGPLAAAVAGAALA FT GAGAAWHHSRVSVAARDGSFTVSAQKNVEHGIIYIGKPSLRKQRFMQFSSLEHEGEYYM FT TPRDFLFSVMFEQMERKTSVKKLTKKDIEDTLSGIQTAGCGSTFFRDLGDKGLISYTEY FT LFLLTILTKPHSGFHVAFKMLDTDGNEMIEKREFFKLQKIISKQDDLMTVKTNETGYQE FT AIVKEPEINTTLQMRFFGKRGQRKLHYKEFRRFMENLQTEIQEMEFLQFSKGLSFMRKE FT DFAEWLLFFTNTENKDIYWKNVREKLSAGESISLDEFKSFCHFTTHLEDFAIAMQMFSL FT AHRPVRLAEFKRAVKVATGQELSNNILDTVFKIFDLDGDECLSHEEFLGVLKNRMHRGL FT WVPQHQSIQEYWKCVKKESIKGVKEVWKQAGKGLF" FT mRNA complement(join(AL136219.17:155346..155364, FT AL136219.17:159616..159681,AL136219.17:160797..160824, FT AL136219.17:166508..166590,22096742..22096789, FT 22113441..22113516,22113796..22113827,22140936..22141083, FT 22178078..22178320)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-002" FT /product="EF-hand domain family, member A1" FT /note="match: ESTs: Em:BI458567" FT mRNA complement(join(AL136219.17:155290..155364, FT AL136219.17:159616..159681,AL136219.17:166508..166590, FT 22096742..22096789,22113441..22113516,22113796..22113827, FT 22140936..22141083,22176883..22176957,22178078..22178304)) FT /gene="EFHA1" FT /locus_tag="RP11-149B7.6-005" FT /product="EF-hand domain family, member A1" FT /note="match: ESTs: Em:BI559746 Em:BI559747" FT misc_feature 22191500 FT /note="Clone_left_end: RP11-271B5" FT misc_feature 22191700..22358302 FT /note="annotated region of clone" FT CDS complement(22202552..22203154) FT /pseudo FT /locus_tag="RP11-271B5.1-001" FT /product="ribosomal protein S7 (40S ribosomal protein S7) FT (RPS7) pseudogene" FT /note="match: proteins: Sw:P02362 Sw:P48155 Sw:P50894 FT Sw:P62081 Sw:P62082 Sw:P62083 Sw:Q10101 Sw:Q90YR7 Sw:Q962S0 FT Sw:Q9ZNS1 Tr:Q29190 Tr:Q967R2" FT /db_xref="PSEUDO:CAC17691.1" FT mRNA join(22245522..22246328,22255181..22255284, FT 22275329..22278637) FT /gene="FGF9" FT /locus_tag="RP11-271B5.2-001" FT /product="fibroblast growth factor 9 (glia-activating FT factor)" FT /note="match: ESTs: Em:BI827161.1 Em:CD613704.1" FT /note="match: cDNAs: Em:BC069692.1 Em:BC103978.1 FT Em:BC103979.1 Em:D14838.1" FT CDS join(22246052..22246328,22255181..22255284, FT 22275329..22275574) FT /gene="FGF9" FT /locus_tag="RP11-271B5.2-001" FT /standard_name="OTTHUMP00000018804" FT /product="fibroblast growth factor 9 (glia-activating FT factor)" FT /note="match: proteins: Sw:P31371.3 Sw:P36364.2 Sw:P54130.1 FT Sw:Q95L12.1 Tr:Q499I9.1 Tr:Q7ZZN4.1" FT /protein_id="CAC17692.1" FT /translation="MAPLGEVGNYFGVQDAVPFGNVPVLPVDSPVLLSDHLGQSEAGGL FT PRGPAVTDLDHLKGILRRRQLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGL FT VSIRGVDSGLYLGMNEKGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRYY FT VALNKDGTPREGTRTKRHQKFTHFLPRPVDPDKVPELYKDILSQS" FT mRNA join(22248141..22248351,22255181..22255284, FT 22275329..22275437) FT /gene="FGF9" FT /locus_tag="RP11-271B5.2-002" FT /product="fibroblast growth factor 9 (glia-activating FT factor)" FT /note="match: ESTs: Em:BE648711" FT mRNA join(22255252..22255392,22275329..22275971) FT /gene="FGF9" FT /locus_tag="RP11-271B5.2-003" FT /product="fibroblast growth factor 9 (glia-activating FT factor)" FT /note="match: ESTs: Em:BI827161" FT misc_feature 22263743 FT /note="Clone_right_end: RP11-110K8" FT misc_feature 22274418 FT /note="Clone_left_end: RP11-282A24" FT polyA_signal 22275604..22275609 FT polyA_site 22275618 FT polyA_signal 22276151..22276156 FT polyA_site 22276187 FT polyA_signal 22278077..22278082 FT polyA_site 22278103 FT polyA_signal 22278612..22278617 FT polyA_site 22278637 FT misc_feature 22358202 FT /note="Clone_right_end: RP11-271B5" FT misc_feature 22358303..22507099 FT /note="annotated region of clone" FT misc_feature 22437385 FT /note="Clone_left_end: RP11-347L8" FT mRNA complement(join(22446909..22447361,22449505..22449705, FT 22449849..22450817)) FT /locus_tag="RP11-107B1.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK057351" FT /note="match: ESTs: Em:AI242212 Em:BE044278" FT misc_feature 22464074..22464294 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 22506999 FT /note="Clone_right_end: RP11-107B1" FT misc_feature 22543489..22543740 FT /note="Tandem repeat. Single clone region. Assembly FT confirmed by restriction digest data" FT misc_feature 22543830..22544132 FT /note="Tandem repeat. Single clone region. Assembly FT confirmed by restriction digest data" FT unsure 22543903 FT /note="Tandem repeat" FT misc_feature 22593899 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 150bp by restriction digest data" FT misc_feature 22613832 FT /note="Clone_right_end: RP11-347L8" FT misc_feature 22621289..22621293 FT /note="1327 bases of IS2 transposon (V00610) removed here. FT This sequence represents the duplicated flanking sequence FT of the IS2" FT misc_feature 22628167 FT /note="Clone_left_end: RP11-273F15" FT misc_feature complement(22632167..22795821) FT /note="annotated region of clone" FT misc_feature complement(22729154..22730110) FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone pcr. Restriction FT digest data confirm the assembly" FT CDS complement(22687258..22687477) FT /pseudo FT /locus_tag="RP11-273F15.1-001" FT /product="mitochondrially encoded NADH dehydrogenase 3 FT (MT-ND3) pseudogene" FT /note="match: proteins: Sw:O21540 Sw:O21549 Sw:O21554 FT Sw:O79434 Sw:P03897 Sw:P41306 Sw:Q36456 Sw:Q95708 Sw:Q9T9V8 FT Sw:Q9T9W7 Sw:Q9T9Y5 Tr:O21525 Tr:O21557 Tr:O79240 Tr:Q8W9G6 FT Tr:Q94N43 Tr:Q953H4 Tr:Q953L3 Tr:Q96114 Tr:Q9B0N1 Tr:Q9B0N2 FT Tr:Q9B6F5 Tr:Q9GA23 Tr:Q9T4E5 Tr:Q9T9Y2" FT misc_feature complement(22674650..22674790) FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS complement(22673302..22673683) FT /pseudo FT /locus_tag="RP11-273F15.2-001" FT /product="non-metastatic cells 1, protein (NM23A) expressed FT in (NME1) pseudogene" FT /note="match: proteins: Sw:O60361 Sw:O81372 Sw:P08879 FT Sw:P15531 Sw:P15532 Sw:P19804 Sw:P22392 Sw:P47922 Sw:P52174 FT Sw:Q02254 Sw:Q05982 Sw:Q39839 Tr:O57560 Tr:P15532 FT Tr:Q9NUF9" FT misc_feature complement(22632167) FT /note="Clone_left_end: RP11-273F15" FT misc_feature 22796381 FT /note="Clone_left_end: RP11-316G23" FT misc_feature 22831296..22831701 FT /note="Single clone region. Sequence from a short insert FT library derived from a clone PCR. Restriction digest data FT confirm assembly" FT misc_feature 22885848..22886269 FT /note="Sequence from overlapping clone AL355507.Assembly FT confirmed by restriction digest" FT misc_feature 22982723 FT /note="Clone_right_end: RP11-316G23" FT misc_feature 23044521 FT /note="Clone_left_end: RP11-26A3" FT misc_feature 23168899 FT /note="Clone_left_end: RP11-274P12" FT misc_feature 23170983..23338996 FT /note="annotated region of clone" FT misc_feature 23211317 FT /note="Clone_right_end: RP11-26A3" FT misc_feature 23253219..23253470 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 23253453 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 400bp by restriction digest data" FT misc_feature 23253924..23253932 FT /note="1329 bases of Tn10 (J01829) removed here. This FT sequence represents the duplicated flanking sequence of the FT Tn10" FT polyA_site complement(23269977) FT polyA_signal complement(23270015..23270020) FT CDS complement(23270162..23270713) FT /pseudo FT /locus_tag="RP11-274P12.1-001" FT /product="ferritin, heavy polypeptide 1 (FTH1) pseudogene" FT /note="match: proteins: Sw:P02794 Sw:P02794 Sw:P02794 FT Sw:P02794 Sw:P02794 Sw:P02794 Sw:P29389 Sw:Q95MP7" FT CDS complement(join(23278878..23279091,23279379..23280345)) FT /pseudo FT /locus_tag="RP11-274P12.2-001" FT /product="DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 39 FT (DDX39) pseudogene" FT /note="match: proteins: Sw:O00148 Sw:O00148 Sw:O13792 FT Sw:P32892 Sw:Q07478 Sw:Q8VDW0 Tr:Q13838 Tr:Q92GV2" FT misc_feature 23330606 FT /note="Clone_left_end: RP11-363G2" FT misc_feature 23335994..23336049 FT /note="Sequence from overlapping clone bA363G2 (AL162853). FT Assembly confirmed by restriction digest" FT misc_feature 23338896 FT /note="Clone_right_end: RP11-274P12" FT misc_feature 23338997..23462589 FT /note="annotated region of clone" FT CDS 23377435..23377787 FT /pseudo FT /locus_tag="RP11-363G2.1-001" FT /product="ribosomal protein L7a (RPL7A) pseudogene." FT /note="match: proteins: Sw:P12970 Sw:P62424 Sw:P62425 FT Sw:Q90YW2 Tr:Q9BY74" FT CDS complement(23411165..23412019) FT /pseudo FT /locus_tag="RP11-363G2.2-001" FT /product="inositol polyphosphate multikinase (IPMK) FT pseudogene" FT /note="match: proteins: Sw:Q92551 Sw:Q9UHH9" FT CDS 23424240..23424700 FT /pseudo FT /locus_tag="RP11-363G2.3-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q8TAC1" FT polyA_signal 23425556..23425561 FT mRNA join(23426135..23426331,23426656..23426991) FT /locus_tag="RP11-363G2.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM720283" FT misc_feature 23462390 FT /note="Clone_left_end: RP11-124N19" FT misc_feature 23462590..23609670 FT /note="annotated region of clone" FT CDS complement(23471480..23472144) FT /pseudo FT /locus_tag="RP11-124N19.1-001" FT /product="brain abundant, membrane attached signal protein FT 1 (BASP1) pseudogene" FT /note="match: proteins: Sw:P80724" FT CDS 23489790..23490662 FT /pseudo FT /locus_tag="RP11-124N19.2-001" FT /product="Novel pseudogene" FT /note="match: proteins: Tr:Q96E22 Tr:Q99LJ8" FT misc_feature 23505583 FT /note="Clone_right_end: RP11-363G2" FT misc_feature 23609471 FT /note="Clone_left_end: RP11-57O2" FT misc_feature 23609671..23791688 FT /note="annotated region of clone" FT misc_feature 23615969 FT /note="Clone_right_end: RP11-124N19" FT misc_feature 23633632..23634346 FT /note="Single clone region. Assembly confirmed by FT restriction digest" FT misc_feature 23634347 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 200bp by restriction digest" FT CDS 23708313..23709394 FT /pseudo FT /locus_tag="RP11-57O2.1-001" FT /product="High-mobility group (nonhistone chromosomal) FT protein pseudogene" FT /note="match: proteins: Sw:P17095 Sw:P17095 Sw:P17095 FT Sw:P17095 Sw:P17096 Sw:P17096 Sw:P17096 Sw:Q9QXP3" FT misc_feature 23713228..23713242 FT /note="Sequence from uni-directional dGTP reads only" FT misc_feature 23732151 FT /note="Clone_left_end: RP11-72P19" FT mRNA join(23743974..23744191,23744691..23744736) FT /locus_tag="RP11-57O2.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA970832" FT mRNA join(23755091..23755214,23777834..23778028, FT AL160256.21:17162..17263,AL160256.21:33181..33268, FT AL160256.21:61910..62029,AL160256.21:77966..78038, FT AL160256.21:103188..103311,AL157766.9:1576..2373) FT /gene="SGCG" FT /locus_tag="RP11-40O20.1-001" FT /product="sarcoglycan, gamma (35kDa dystrophin-associated FT glycoprotein)" FT /note="match: cDNAs: Em:BC074777.2 Em:BC074778.2 FT Em:BC109321.1 Em:U34976.1" FT /note="match: ESTs: Em:BG201553.1 Em:BX098887.1 FT Em:DA896017.1 Em:DW009911.1" FT CDS join(23777834..23778028,AL160256.21:17162..17263, FT AL160256.21:33181..33268,AL160256.21:61910..62029, FT AL160256.21:77966..78038,AL160256.21:103188..103311, FT AL157766.9:1576..1749) FT /gene="SGCG" FT /locus_tag="RP11-40O20.1-001" FT /standard_name="OTTHUMP00000018112" FT /product="sarcoglycan, gamma (35kDa dystrophin-associated FT glycoprotein)" FT /note="match: proteins: Sw:O08597.3 Sw:P82348.1 Sw:Q8SQ72.1 FT Tr:Q28646.3 Tr:Q32M32.1 Tr:Q5T8I2.1 Tr:Q9EQ83.1" FT /protein_id="CAI16053.1" FT /translation="MVREQYTTATEGICIERPENQYVYKIGIYGWRKRCLYLFVLLLLI FT ILVVNLALTIWILKVMWFSPAGMGHLCVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLL FT LQSTQNVTVNARNSEGEVTGRLKVGPKMVEVQNQQFQINSNDGKPLFTVDEKEVVVGTD FT KLRVTGPEGALFEHSVETPLVRADPFQDLRLESPTRSLSMDAPRGVHIQAHAGKIEALS FT QMDILFHSSDGMLVLDAETVCLPKLVQGTWGPSGSSQSLYEICVCPDGKLYLSVAGVST FT TCQEHNHICL" FT misc_feature 23791588 FT /note="Clone_right_end: RP11-57O2" FT misc_feature 23791689..23897031 FT /note="annotated region of clone" FT CDS 23817659..23821323 FT /pseudo FT /locus_tag="RP11-72P19.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q93075" FT misc_feature 23833112 FT /note="Clone_left_end: RP11-40O20" FT CDS 23841645..23843289 FT /pseudo FT /locus_tag="RP11-72P19.3-001" FT /product="novel FLJ10498 pseudogene" FT /note="match: proteins: Tr:Q9H9P6 Tr:Q9NVU7 Tr:Q9V536 FT Tr:Q9V536" FT misc_feature 23896931 FT /note="Clone_right_end: RP11-72P19" FT mRNA join(AL356287.16:145521..145644,AL356287.16:168264..168458, FT 23808750..23808851,23824769..23824856,23853498..23853617, FT 23869554..23869626,23894776..23894899, FT AL157766.9:1576..2373) FT /gene="SGCG" FT /locus_tag="RP11-40O20.1-001" FT /product="sarcoglycan, gamma (35kDa dystrophin-associated FT glycoprotein)" FT /note="match: cDNAs: Em:BC074777.2 Em:BC074778.2 FT Em:BC109321.1 Em:U34976.1" FT /note="match: ESTs: Em:BG201553.1 Em:BX098887.1 FT Em:DA896017.1 Em:DW009911.1" FT CDS join(AL356287.16:168264..168458,23808750..23808851, FT 23824769..23824856,23853498..23853617,23869554..23869626, FT 23894776..23894899,AL157766.9:1576..1749) FT /gene="SGCG" FT /locus_tag="RP11-40O20.1-001" FT /standard_name="OTTHUMP00000018112" FT /product="sarcoglycan, gamma (35kDa dystrophin-associated FT glycoprotein)" FT /note="match: proteins: Sw:O08597.3 Sw:P82348.1 Sw:Q8SQ72.1 FT Tr:Q28646.3 Tr:Q32M32.1 Tr:Q5T8I2.1 Tr:Q9EQ83.1" FT /protein_id="CAI16544.1" FT /translation="MVREQYTTATEGICIERPENQYVYKIGIYGWRKRCLYLFVLLLLI FT ILVVNLALTIWILKVMWFSPAGMGHLCVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLL FT LQSTQNVTVNARNSEGEVTGRLKVGPKMVEVQNQQFQINSNDGKPLFTVDEKEVVVGTD FT KLRVTGPEGALFEHSVETPLVRADPFQDLRLESPTRSLSMDAPRGVHIQAHAGKIEALS FT QMDILFHSSDGMLVLDAETVCLPKLVQGTWGPSGSSQSLYEICVCPDGKLYLSVAGVST FT TCQEHNHICL" FT misc_feature 23897032..23989624 FT /note="annotated region of clone" FT polyA_signal 23899280..23899285 FT polyA_site 23899304 FT polyA_site complement(23902965) FT polyA_signal complement(23902988..23902993) FT CDS complement(23904275..23915764) FT /gene="SACS" FT /locus_tag="RP11-40O20.2-003" FT /standard_name="OTTHUMP00000018111" FT /product="spastic ataxia of Charlevoix-Saguenay (sacsin)" FT /note="match: proteins: Sw:Q9NZJ4-2.2 Sw:Q9NZJ4.2" FT /protein_id="CAI13922.3" FT /translation="MNTFWPGRELIVQWYPFDENRNHPSVSWLKMVWKNLYIHFSEDLT FT LFDEMPLIPRTILEEGQTCVELIRLRIPSLVILDDESEAQLPEFLADIVQKLGGFVLKK FT LDASIQHPLIKKYIHSPLPSAVLQIMEKMPLQKLCNQITSLLPTHKDALRKFLASLTDS FT SEKEKRIIQELAIFKRINHSSDQGISSYTKLKGCKVLHHTAKLPADLRLSISVIDSSDE FT ATIRLANMLKIEQLKTTSCLKLVLKDIENAFYSHEEVTQLMLWVLENLSSLKNENPNVL FT EWLTPLKFIQISQEQMVSAGELFDPDIEVLKDLFCNEEGTYFPPSVFTSPDILHSLRQI FT GLKNEASLKEKDVVQVAKKIEALQVGACPDQDVLLKKAKTLLLVLNKNHTLLQSSEGKM FT TLKKIKWVPACKERPPNYPGSLVWKGDLCNLCAPPDMCDVGHAILIGSSLPLVESIHVN FT LEKALGIFTKPSLSAVLKHFKIVVDWYSSKTFSDEDYYQFQHILLEIYGFMHDHLNEGK FT DSFRALKFPWVWTGKKFCPLAQAVIKPIHDLDLQPYLHNVPKTMAKFHQLFKVCGSIEE FT LTSDHISMVIQKIYLKSDQDLSEQESKQNLHLMLNIIRWLYSNQIPASPNTPVPIHHSK FT NPSKLIMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLI FT NPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNM FT DIRENLLDPGMAACHGPALWSFNNSQFSDSDFVNITRLGESLKRGEVDKVGKFGLGFNS FT VYHITDIPIIMSREFMIMFDPNINHISKHIKDKSNPGIKINWSKQQKRLRKFPNQFKPF FT IDVFGCQLPLTVEAPYSYNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCG FT HRLIIFTQSVKSMYLKYLKIEETNPSLAQDTVIIKKKSCSSKALNTPVLSVLKEAAKLM FT KTCSSSNKKLPSDEPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKS FT GQSKKPSDELSQKTVECTTWLLCTCMDTGEALKFSLSESGRRLGLVPCGAVGVQLSEIQ FT DQKWTVKPHIGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHV FT IVKAYLQVLSVLRDLATSGELMDYTYYAVWPDPDLVHDDFSVICQGFYEDIAHGKGKEL FT TKVFSDGSTWVSMKNVRFLDDSILKRRDVGSAAFKIFLKYLKKTGSKNLCAVELPSSVK FT LGFEEAGCKQILLENTFSEKQFFSEVFFPNIQEIEAELRDPLMIFVLNEKVDEFSGVLR FT VTPCIPCSLEGHPLVLPSRLIHPEGRVAKLFDIKDGRFPYGSTQDYLNPIILIKLVQLG FT MAKDDILWDDMLERAVSVAEINKSDHVAACLRSSILLSLIDEKLKIRDPRAKDFAAKYQ FT TIRFLPFLTKPAGFSLDWKGNSFKPETMFAATDLYTAEHQDIVCLLQPILNENSHSFRG FT CGSVSLAVKEFLGLLKKPTVDLVINQLKEVAKSVDDGITLYQENITNACYKYLHEALMQ FT NEITKMSIIDKLKPFSFILVENAYVDSEKVSFHLNFEAAPYLYQLPNKYKNNFRELFET FT VGVRQSCTVEDFALVLESIDQERGTKQITEENFQLCRRIISEGIWSLIREKKQEFCEKN FT YGKILLPDTNLMLLPAKSLCYNDCPWIKVKDTTVKYCHADIPREVAVKLGAVPKRHKAL FT ERYASNVCFTTLGTEFGQKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVF FT DPRQHPVDRIFDDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPYKTGQYGI FT GFNSVYHITDCPSFISGNDILCIFDPHARYAPGATSISPGRMFRDLDADFRTQFSDVLD FT LYLGTHFKLDNCTMFRFPLRNAEMAKVSEISSVPASDRMVQNLLDKLRSDGAELLMFLN FT HMEKISICEIDKSTGALNVLYSVKGKITDGDRLKRKQFHASVIDSVTKKRQLKDIPVQQ FT ITYTMDTEDSEGNLTTWLICNRSGFSSMEKVSKSVISAHKNQDITLFPRGGVAACITHN FT YKKPHRAFCFLPLSLETGLPFHVNGHFALDSARRNLWRDDNGVGVRSDWNNSLMTALIA FT PAYVELLIQLKKRYFPGSDPTLSVLQNTPIHVVKDTLKKFLSFFPVNRLDLQPDLYCLV FT KALYNCIHEDMKRLLPVVRAPNIDGSDLHSAVIITWINMSTSNKTRPFFDNLLQDELQH FT LKNADYNITTRKTVAENVYRLKHLLLEIGFNLVYNCDETANLYHCLIDADIPVSYVTPA FT DIRSFLMTFSSPDTNCHIGKLPCRLQQTNLKLFHSLKLLVDYCFKDAEENEIEVEGLPL FT LITLDSVLQTFDAKRPKFLTTYHELIPSRKDLFMNTLYLKYSNILLNCKVAKVFDISSF FT ADLLSSVLPREYKTKSCTKWKDNFASESWLKNAWHFISESVSVKEDQEETKPTFDIVVD FT TLKDWALLPGTKFTVSANQLVVPEGDVLLPLSLMHIAVFPNAQSDKVFHALMKAGCIQL FT ALNKICSKDSAFVPLLSCHTANIESPTSILKALHYMVQTSTFRAEKLVENDFEALLMYF FT NCNLNHLMSQDDIKILKSLPCYKSISGRYVSIGKFGTCYVLTKSIPSAEVEKWTQSSSS FT AFLEEKIHLKELYEVIGCVPVDDLEVYLKHLLPKIENLSYDAKLEHLIYLKNRLSSAEE FT LSEIKEQLFEKLESLLIIHDANSRLKQAKHFYDRTVRVFEVMLPEKLFIPNDFFKKLEQ FT LIKPKNHVTFMTSWVEFLRNIGLKYILSQQQLLQFAKEISVRANTENWSKETLQNTVDI FT LLHHIFQERMDLLSGNFLKELSLIPFLCPERAPAEFIRFHPQYQEVNGTLPLIKFNGAQ FT VNPKFKQCDVLQLLWTSCPILPEKATPLSIKEQEGSDLGPQEQLEQVLNMLNVNLDPPL FT DKVINNCRNICNITTLDEEMVKTRAKVLRSIYEFLSAEKREFRFQLRGVAFVMVEDGWK FT LLKPEEVVINLEYESDFKPYLYKLPLELGTFHQLFKHLGTEDIISTKQYVEVLSRIFKN FT SEGKQLDPNEMRTVKRVVSGLFRSLQNDSVKVRSDLENVRDLALYLPSQDGRLVKSSIL FT VFDDAPHYKSRIQGNIGVQMLVDLSQCYLGKDHGFHTKLIMLFPQKLRPRLLSSILEEQ FT LDEETPKVCQFGALCSLQGRLQLLLSSEQFITGLIRIMKHENDNAFLANEEKAIRLCKA FT LREGLKVSCFEKLQTTLRVKGFNPIPHSRSETFAFLKRFGNAVILLYIQHSDSKDINFL FT LALAMTLKSATDNLISDTSYLIAMLGCNDIYRIGEKLDSLGVKYDSSEPSKLELPMPGT FT PIPAEIHYTLLMDPMNVFYPGEYVGYLVDAEGGDIYGSYQPTYTYAIIVQEVEREDADN FT SSFLGKIYQIDIGYSEYKIVSSLDLYKFSRPEESSQSRDSAPSTPTSPTEFLTPGLRSI FT PPLFSGRESHKTSSKHQSPKKLKVNSLPEILKEVTSVVEQAWKLPESERKKIIRRLYLK FT WHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNADRASRRTFSTSASRFQSDKYSF FT QRFYTSWNQEATSHKSERQQQNKEKCPPSAGQTYSQRFFVPPTFKSVGNPVEARRWLRQ FT ARANFSAARNDLHKNANEWVCFKCYLSTKLALIAADYAVRGKSDKDVKPTALAQKIEEY FT SQQLEGLTNDVHTLEAYGVDSLKTRYPDLLPFPQIPNDRFTSEVAMRVMECTACIIIKL FT ENFMQQKV" FT mRNA complement(join(23902972..23903623,23927924..23928015, FT 23928658..>23929622)) FT /gene="SACS" FT /locus_tag="RP11-40O20.2-005" FT /product="spastic ataxia of Charlevoix-Saguenay (sacsin)" FT /note="match: cDNAs: Em:AK090599.1 Em:AX746526.1" FT CDS complement(join(23903556..23903623,23927924..23928015, FT 23928658..>23929622)) FT /codon_start=1 FT /gene="SACS" FT /locus_tag="RP11-40O20.2-005" FT /standard_name="OTTHUMP00000201881" FT /product="spastic ataxia of Charlevoix-Saguenay (sacsin)" FT /protein_id="CAQ52598.1" FT /translation="IVLEEESTKDAQKTSWLVCNSVGGRGISSKLDSLADELKFVPIIG FT IAMPLSSRDDEAKGATSDFSGKAFCFLPLPPGEESSTGLPVHISGFFGLTDNRRSIKWR FT ELDQWRDPAALWNEFLVMNVVPKAYATLILDSIKRLEMEKSSDFPLSVDVIYKLWPEAS FT KVKVHWQPVLEPLFSELLQNAVIYSISCDWVRLEQVYFSELDENLEYTKTVLNYLQSSG FT KQIAKVPGNVDAAVQLTAASGTTPVRKVTPAWVRQVLRKCAHLGCAEEKLHLLEFVLSD FT QAYSELLGLELLPLQNGNFVPFSSSVSDQDVIYITSAEYPRSLFPSLEGRFILDNLKPH FT LVAALKEAAQTRGFLFDEDSNGKLKMVAVLITSC" FT mRNA complement(join(23927875..23928015,23928658..23929029)) FT /gene="SACS" FT /locus_tag="RP11-40O20.2-002" FT /product="spastic ataxia of Charlevoix-Saguenay (sacsin)" FT /note="match: ESTs: Em:AI377467.1 Em:BU623146.1" FT misc_feature 23938153..23938236 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA complement(join(23902969..23903623,23915584..23915829, FT 23927924..23928015,23928658..23930146,23932474..23932620, FT 23939305..23939416,23942541..>23942583)) FT /gene="SACS" FT /locus_tag="RP11-40O20.2-004" FT /product="spastic ataxia of Charlevoix-Saguenay (sacsin)" FT /note="match: cDNAs: Em:BX640926.1" FT CDS complement(join(23903556..23903623,23915584..23915829, FT 23927924..23928015,23928658..23930146,23932474..23932620, FT 23939305..23939416,23942541..>23942583)) FT /codon_start=2 FT /gene="SACS" FT /locus_tag="RP11-40O20.2-004" FT /standard_name="OTTHUMP00000201880" FT /product="spastic ataxia of Charlevoix-Saguenay (sacsin)" FT /protein_id="CAQ52599.1" FT /translation="DILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTETLWSK FT DMAPYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPC FT IFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEISELSDQFAPFVGIFGSTKETFING FT NFPGTFFRFPLRLQPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDVSLYVREA FT DGTEKLVFRVTSSESKALKHERPNSIKILGTAISNYCKKTPSNNITCVTYHVNIVLEEE FT STKDAQKTSWLVCNSVGGRGISSKLDSLADELKFVPIIGIAMPLSSRDDEAKGATSDFS FT GKAFCFLPLPPGEESSTGLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNEFLVMNV FT VPKAYATLILDSIKRLEMEKSSDFPLSVDVIYKLWPEASKVKVHWQPVLEPLFSELLQN FT AVIYSISCDWVRLEQVYFSELDENLEYTKTVLNYLQSSGKQIAKVPGNVDAAVQLTAAS FT GTTPVRKVTPAWVRQVLRKCAHLGCAEEKLHLLEFVLSDQAYSELLGLELLPLQNGNFV FT PFSSSVSDQDVIYITSAEYPRSLFPSLEGRFILDNLKPHLVAALKEAAQTRGRPCTQLQ FT LLNPERFARLIKEVMNTFWPGRELIVQWYPFDENRNHPSVSWLKMVWKNLYIHFSEDLT FT LFDEMPLIPRTILEEGFLFDEDSNGKLKMVAVLITSC" FT CDS join(23947562..23947627,23947968..23948155) FT /pseudo FT /locus_tag="RP11-40O20.4-001" FT /product="ribosomal protein, large, P1 (RPLP1) pseudogene" FT /note="match: proteins: Sw:P05386 Sw:P19944" FT mRNA complement(join(23902965..23915829,23927924..23928015, FT 23928658..23930146,23932474..23932620,23939305..23939416, FT 23942541..23942626,23949258..23949408,23949491..23949682)) FT /gene="SACS" FT /locus_tag="RP11-40O20.2-003" FT /product="spastic ataxia of Charlevoix-Saguenay (sacsin)" FT /note="match: ESTs: Em:AA776169.1 Em:AL710553.1 FT Em:AV716805.2 Em:BF002151.1 Em:BM470780.1 Em:BM471481.1 FT Em:BM476887.1 Em:BP251787.1 Em:BU902029.1 Em:BU902860.1 FT Em:BX473013.1 Em:CN268682.1 Em:CN359237.1 Em:CX786172.1 FT Em:DA340515.1 Em:DA796194.1 Em:DR157007.1" FT /note="match: cDNAs: Em:AK125458.1 Em:BX640926.1" FT mRNA complement(join(23902965..23915829,23927924..23928015, FT 23928658..23930146,23932474..23932620,23939305..23939416, FT 23942541..23942626,23945217..23945304,23949258..23949408, FT 23985359..23985652)) FT /gene="SACS" FT /locus_tag="RP11-40O20.2-001" FT /product="spastic ataxia of Charlevoix-Saguenay (sacsin)" FT /note="match: cDNAs: Em:AK160797.1 Em:CR749427.1" FT /note="match: ESTs: Em:AW294735.1 Em:AW295072.1 FT Em:AW296712.1 Em:BF326199.1 Em:BG615316.1 Em:BI599024.1 FT Em:BM457998.1 Em:BM470780.1 Em:BM471534.1 Em:BM472954.1 FT Em:BM476997.1 Em:BM543193.1 Em:BU742125.1 Em:BU902029.1 FT Em:BX096955.1 Em:CD656838.1 Em:CN263546.1 Em:CR987846.1 FT Em:DA340515.1 Em:DR000792.1 Em:R17106.1" FT CDS complement(join(23904275..23915829,23927924..23928015, FT 23928658..23930146,23932474..23932620,23939305..23939416, FT 23942541..23942626,23945217..23945304,23949258..23949408, FT 23985359..23985378)) FT /gene="SACS" FT /locus_tag="RP11-40O20.2-001" FT /standard_name="OTTHUMP00000018109" FT /product="spastic ataxia of Charlevoix-Saguenay (sacsin)" FT /note="match: proteins: Sw:Q9NZJ4.2" FT /protein_id="CAI13923.3" FT /translation="METKENRWVPVTVLPGCVGCRTVAALASWTVRDVKERIFAETGFP FT VSEQRLWRGGRELSDWIKIGDLTSKNCHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDIL FT RRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTETLWSKDMAPYQGPALYVYNNAV FT FTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLF FT GPHESGQCWNLKDDSKEISELSDQFAPFVGIFGSTKETFINGNFPGTFFRFPLRLQPSQ FT LSSNLYNKQKVLELFESFRADADTVLLFLKSVQDVSLYVREADGTEKLVFRVTSSESKA FT LKHERPNSIKILGTAISNYCKKTPSNNITCVTYHVNIVLEEESTKDAQKTSWLVCNSVG FT GRGISSKLDSLADELKFVPIIGIAMPLSSRDDEAKGATSDFSGKAFCFLPLPPGEESST FT GLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNEFLVMNVVPKAYATLILDSIKRLE FT MEKSSDFPLSVDVIYKLWPEASKVKVHWQPVLEPLFSELLQNAVIYSISCDWVRLEQVY FT FSELDENLEYTKTVLNYLQSSGKQIAKVPGNVDAAVQLTAASGTTPVRKVTPAWVRQVL FT RKCAHLGCAEEKLHLLEFVLSDQAYSELLGLELLPLQNGNFVPFSSSVSDQDVIYITSA FT EYPRSLFPSLEGRFILDNLKPHLVAALKEAAQTRGRPCTQLQLLNPERFARLIKEVMNT FT FWPGRELIVQWYPFDENRNHPSVSWLKMVWKNLYIHFSEDLTLFDEMPLIPRTILEEGQ FT TCVELIRLRIPSLVILDDESEAQLPEFLADIVQKLGGFVLKKLDASIQHPLIKKYIHSP FT LPSAVLQIMEKMPLQKLCNQITSLLPTHKDALRKFLASLTDSSEKEKRIIQELAIFKRI FT NHSSDQGISSYTKLKGCKVLHHTAKLPADLRLSISVIDSSDEATIRLANMLKIEQLKTT FT SCLKLVLKDIENAFYSHEEVTQLMLWVLENLSSLKNENPNVLEWLTPLKFIQISQEQMV FT SAGELFDPDIEVLKDLFCNEEGTYFPPSVFTSPDILHSLRQIGLKNEASLKEKDVVQVA FT KKIEALQVGACPDQDVLLKKAKTLLLVLNKNHTLLQSSEGKMTLKKIKWVPACKERPPN FT YPGSLVWKGDLCNLCAPPDMCDVGHAILIGSSLPLVESIHVNLEKALGIFTKPSLSAVL FT KHFKIVVDWYSSKTFSDEDYYQFQHILLEIYGFMHDHLNEGKDSFRALKFPWVWTGKKF FT CPLAQAVIKPIHDLDLQPYLHNVPKTMAKFHQLFKVCGSIEELTSDHISMVIQKIYLKS FT DQDLSEQESKQNLHLMLNIIRWLYSNQIPASPNTPVPIHHSKNPSKLIMKPIHECCYCD FT IKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLT FT VRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNMDIRENLLDPGMAACHGP FT ALWSFNNSQFSDSDFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMI FT MFDPNINHISKHIKDKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYS FT YNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVKSMYLKY FT LKIEETNPSLAQDTVIIKKKSCSSKALNTPVLSVLKEAAKLMKTCSSSNKKLPSDEPKS FT SCILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKSGQSKKPSDELSQKTVEC FT TTWLLCTCMDTGEALKFSLSESGRRLGLVPCGAVGVQLSEIQDQKWTVKPHIGEVFCYL FT PLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHVIVKAYLQVLSVLRDLAT FT SGELMDYTYYAVWPDPDLVHDDFSVICQGFYEDIAHGKGKELTKVFSDGSTWVSMKNVR FT FLDDSILKRRDVGSAAFKIFLKYLKKTGSKNLCAVELPSSVKLGFEEAGCKQILLENTF FT SEKQFFSEVFFPNIQEIEAELRDPLMIFVLNEKVDEFSGVLRVTPCIPCSLEGHPLVLP FT SRLIHPEGRVAKLFDIKDGRFPYGSTQDYLNPIILIKLVQLGMAKDDILWDDMLERAVS FT VAEINKSDHVAACLRSSILLSLIDEKLKIRDPRAKDFAAKYQTIRFLPFLTKPAGFSLD FT WKGNSFKPETMFAATDLYTAEHQDIVCLLQPILNENSHSFRGCGSVSLAVKEFLGLLKK FT PTVDLVINQLKEVAKSVDDGITLYQENITNACYKYLHEALMQNEITKMSIIDKLKPFSF FT ILVENAYVDSEKVSFHLNFEAAPYLYQLPNKYKNNFRELFETVGVRQSCTVEDFALVLE FT SIDQERGTKQITEENFQLCRRIISEGIWSLIREKKQEFCEKNYGKILLPDTNLMLLPAK FT SLCYNDCPWIKVKDTTVKYCHADIPREVAVKLGAVPKRHKALERYASNVCFTTLGTEFG FT QKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPRQHPVDRIFDDKWAP FT LQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPYKTGQYGIGFNSVYHITDCPSFISG FT NDILCIFDPHARYAPGATSISPGRMFRDLDADFRTQFSDVLDLYLGTHFKLDNCTMFRF FT PLRNAEMAKVSEISSVPASDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKSTGAL FT NVLYSVKGKITDGDRLKRKQFHASVIDSVTKKRQLKDIPVQQITYTMDTEDSEGNLTTW FT LICNRSGFSSMEKVSKSVISAHKNQDITLFPRGGVAACITHNYKKPHRAFCFLPLSLET FT GLPFHVNGHFALDSARRNLWRDDNGVGVRSDWNNSLMTALIAPAYVELLIQLKKRYFPG FT SDPTLSVLQNTPIHVVKDTLKKFLSFFPVNRLDLQPDLYCLVKALYNCIHEDMKRLLPV FT VRAPNIDGSDLHSAVIITWINMSTSNKTRPFFDNLLQDELQHLKNADYNITTRKTVAEN FT VYRLKHLLLEIGFNLVYNCDETANLYHCLIDADIPVSYVTPADIRSFLMTFSSPDTNCH FT IGKLPCRLQQTNLKLFHSLKLLVDYCFKDAEENEIEVEGLPLLITLDSVLQTFDAKRPK FT FLTTYHELIPSRKDLFMNTLYLKYSNILLNCKVAKVFDISSFADLLSSVLPREYKTKSC FT TKWKDNFASESWLKNAWHFISESVSVKEDQEETKPTFDIVVDTLKDWALLPGTKFTVSA FT NQLVVPEGDVLLPLSLMHIAVFPNAQSDKVFHALMKAGCIQLALNKICSKDSAFVPLLS FT CHTANIESPTSILKALHYMVQTSTFRAEKLVENDFEALLMYFNCNLNHLMSQDDIKILK FT SLPCYKSISGRYVSIGKFGTCYVLTKSIPSAEVEKWTQSSSSAFLEEKIHLKELYEVIG FT CVPVDDLEVYLKHLLPKIENLSYDAKLEHLIYLKNRLSSAEELSEIKEQLFEKLESLLI FT IHDANSRLKQAKHFYDRTVRVFEVMLPEKLFIPNDFFKKLEQLIKPKNHVTFMTSWVEF FT LRNIGLKYILSQQQLLQFAKEISVRANTENWSKETLQNTVDILLHHIFQERMDLLSGNF FT LKELSLIPFLCPERAPAEFIRFHPQYQEVNGTLPLIKFNGAQVNPKFKQCDVLQLLWTS FT CPILPEKATPLSIKEQEGSDLGPQEQLEQVLNMLNVNLDPPLDKVINNCRNICNITTLD FT EEMVKTRAKVLRSIYEFLSAEKREFRFQLRGVAFVMVEDGWKLLKPEEVVINLEYESDF FT KPYLYKLPLELGTFHQLFKHLGTEDIISTKQYVEVLSRIFKNSEGKQLDPNEMRTVKRV FT VSGLFRSLQNDSVKVRSDLENVRDLALYLPSQDGRLVKSSILVFDDAPHYKSRIQGNIG FT VQMLVDLSQCYLGKDHGFHTKLIMLFPQKLRPRLLSSILEEQLDEETPKVCQFGALCSL FT QGRLQLLLSSEQFITGLIRIMKHENDNAFLANEEKAIRLCKALREGLKVSCFEKLQTTL FT RVKGFNPIPHSRSETFAFLKRFGNAVILLYIQHSDSKDINFLLALAMTLKSATDNLISD FT TSYLIAMLGCNDIYRIGEKLDSLGVKYDSSEPSKLELPMPGTPIPAEIHYTLLMDPMNV FT FYPGEYVGYLVDAEGGDIYGSYQPTYTYAIIVQEVEREDADNSSFLGKIYQIDIGYSEY FT KIVSSLDLYKFSRPEESSQSRDSAPSTPTSPTEFLTPGLRSIPPLFSGRESHKTSSKHQ FT SPKKLKVNSLPEILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVF FT KHLQNEINRLEKQAFLDQNADRASRRTFSTSASRFQSDKYSFQRFYTSWNQEATSHKSE FT RQQQNKEKCPPSAGQTYSQRFFVPPTFKSVGNPVEARRWLRQARANFSAARNDLHKNAN FT EWVCFKCYLSTKLALIAADYAVRGKSDKDVKPTALAQKIEEYSQQLEGLTNDVHTLEAY FT GVDSLKTRYPDLLPFPQIPNDRFTSEVAMRVMECTACIIIKLENFMQQKV" FT misc_feature 23989425 FT /note="Clone_left_end: RP11-760M1" FT mRNA join(AL356287.16:145521..145644,AL356287.16:168264..168458, FT AL160256.21:17162..17263,AL160256.21:33181..33268, FT AL160256.21:61910..62029,AL160256.21:77966..78038, FT AL160256.21:103188..103311,23898507..23899304) FT /gene="SGCG" FT /locus_tag="RP11-40O20.1-001" FT /product="sarcoglycan, gamma (35kDa dystrophin-associated FT glycoprotein)" FT /note="match: ESTs: Em:BG201553.1 Em:BX098887.1 FT Em:DA896017.1 Em:DW009911.1" FT /note="match: cDNAs: Em:BC074777.2 Em:BC074778.2 FT Em:BC109321.1 Em:U34976.1" FT CDS join(AL356287.16:168264..168458,AL160256.21:17162..17263, FT AL160256.21:33181..33268,AL160256.21:61910..62029, FT AL160256.21:77966..78038,AL160256.21:103188..103311, FT 23898507..23898680) FT /gene="SGCG" FT /locus_tag="RP11-40O20.1-001" FT /standard_name="OTTHUMP00000018112" FT /product="sarcoglycan, gamma (35kDa dystrophin-associated FT glycoprotein)" FT /note="match: proteins: Sw:O08597.3 Sw:P82348.1 Sw:Q8SQ72.1 FT Tr:Q28646.3 Tr:Q32M32.1 Tr:Q5T8I2.1 Tr:Q9EQ83.1" FT /protein_id="CAI13924.1" FT /translation="MVREQYTTATEGICIERPENQYVYKIGIYGWRKRCLYLFVLLLLI FT ILVVNLALTIWILKVMWFSPAGMGHLCVTKDGLRLEGESEFLFPLYAKEIHSRVDSSLL FT LQSTQNVTVNARNSEGEVTGRLKVGPKMVEVQNQQFQINSNDGKPLFTVDEKEVVVGTD FT KLRVTGPEGALFEHSVETPLVRADPFQDLRLESPTRSLSMDAPRGVHIQAHAGKIEALS FT QMDILFHSSDGMLVLDAETVCLPKLVQGTWGPSGSSQSLYEICVCPDGKLYLSVAGVST FT TCQEHNHICL" FT misc_feature 23989625..24158187 FT /note="annotated region of clone" FT mRNA join(23993110..23993440,24001106..24002818) FT /locus_tag="RP11-760M1.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK057396" FT misc_feature 24002462 FT /note="Clone_right_end: RP11-40O20" FT mRNA join(24044186..24044330,24044653..24044829, FT 24060374..24060449) FT /locus_tag="RP11-760M1.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:W42883 Em:W42903" FT mRNA join(24072935..24072981,24076509..24077013) FT /locus_tag="RP11-760M1.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI961232" FT mRNA join(24144509..24144987,AL161422.14:6202..6304, FT AL161422.14:9397..9507,AL161422.14:31919..32097, FT AL161422.14:42759..42844,AL161422.14:75102..75266, FT AL161422.14:76417..76542,AL161422.14:84032..84134, FT AL161422.14:84744..85149,AL161422.14:89424..90941) FT /gene="TNFRSF19" FT /locus_tag="RP11-168G12.1-004" FT /product="tumor necrosis factor receptor superfamily, FT member 19" FT /note="match: cDNAs: Em:BC047321.1" FT /note="match: ESTs: Em:DA192370.1" FT mRNA join(24153498..24153668,AL161422.14:1508..1597, FT AL161422.14:6202..6304,AL161422.14:9397..9507, FT AL161422.14:10279..10463) FT /gene="TNFRSF19" FT /locus_tag="RP11-168G12.1-003" FT /product="tumor necrosis factor receptor superfamily, FT member 19" FT /note="match: cDNAs: Em:BC035796.1" FT mRNA join(24153499..24153668,AL161422.14:6202..6304, FT AL161422.14:9397..9507,AL161422.14:31919..32097, FT AL161422.14:42759..42844,AL161422.14:75102..75266, FT AL161422.14:76417..76542,AL161422.14:84032..84134, FT AL161422.14:84744..85325) FT /gene="TNFRSF19" FT /locus_tag="RP11-168G12.1-001" FT /product="tumor necrosis factor receptor superfamily, FT member 19" FT /note="match: cDNAs: Em:AF167555.1" FT /note="match: ESTs: Em:CD654665.1 Em:DA753166.1 FT Em:DB070677.1 Em:DB222789.1 Em:DB224147.1 Em:DB239235.1 FT Em:DB291895.1 Em:W56629.1" FT mRNA join(24153519..24153668,AL161422.14:6202..6304, FT AL161422.14:9397..9507,AL161422.14:31919..32097, FT AL161422.14:42759..42844,AL161422.14:75102..75266, FT AL161422.14:76417..76542,AL161422.14:84032..84134, FT AL161422.14:84744..85149,AL161422.14:89424..92145) FT /gene="TNFRSF19" FT /locus_tag="RP11-168G12.1-002" FT /product="tumor necrosis factor receptor superfamily, FT member 19" FT /note="match: cDNAs: Em:AY358888.1" FT /note="match: ESTs: Em:BM473137.1 Em:BM555827.1 FT Em:CK903007.1 Em:CN304089.1 Em:DB084653.1" FT misc_feature 24157988 FT /note="Clone_left_end: RP11-168G12" FT misc_feature 24158188..24301507 FT /note="annotated region of clone" FT CDS join(24164323..24164391,24167484..24167594, FT 24190006..24190184,24200846..24200931,24233189..24233353, FT 24234504..24234629,24242119..24242221,24242831..24243263) FT /gene="TNFRSF19" FT /locus_tag="RP11-168G12.1-001" FT /standard_name="OTTHUMP00000018113" FT /product="tumor necrosis factor receptor superfamily, FT member 19" FT /note="match: proteins: Sw:Q9NS68.1 Tr:Q5VZF8.1" FT /protein_id="CAH70838.1" FT /translation="MALKVLLEQEKTFFTLLVLLGYLSCKVTCESGDCRQQEFRDRSGN FT CVPCNQCGPGMELSKECGFGYGEDAQCVTCRLHRFKEDWGFQKCKPCLDCAVVNRFQKA FT NCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCASKVNLVKIASTAS FT SPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRSQDIQYNGSELSCFD FT RPQLHEYAHRACCQCRRDSVQTCGPVRLLPSMCCEEACSPNPATLGCGVHSAASLQARN FT AGPAGEMVPTFFGSLTQSICGEFSDAWPLMQNPMGGDNISFCDSYPELTGEDIHSLNPE FT LESSTSLDSNSSQDLVGGAVPVQSHSENFTAATDLSRYNNTLVESASTQDALTMRSQLD FT QESGAVIHPATQTSLQVRQRLGSL" FT CDS join(24164323..24164391,24167484..24167594, FT 24190006..24190184,24200846..24200931,24233189..24233353, FT 24234504..24234629,24242119..24242221,24242831..24243236, FT 24247511..24247519) FT /gene="TNFRSF19" FT /locus_tag="RP11-168G12.1-002" FT /standard_name="OTTHUMP00000018114" FT /product="tumor necrosis factor receptor superfamily, FT member 19" FT /note="match: proteins: Tr:Q5VZF7.1" FT /protein_id="CAH70837.2" FT /translation="MALKVLLEQEKTFFTLLVLLGYLSCKVTCESGDCRQQEFRDRSGN FT CVPCNQCGPGMELSKECGFGYGEDAQCVTCRLHRFKEDWGFQKCKPCLDCAVVNRFQKA FT NCSATSDAICGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCASKVNLVKIASTAS FT SPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRSQDIQYNGSELSCFD FT RPQLHEYAHRACCQCRRDSVQTCGPVRLLPSMCCEEACSPNPATLGCGVHSAASLQARN FT AGPAGEMVPTFFGSLTQSICGEFSDAWPLMQNPMGGDNISFCDSYPELTGEDIHSLNPE FT LESSTSLDSNSSQDLVGGAVPVQSHSENFTAATDLSRYNNTLVESASTQDALTMRSQLD FT QESGAVIHPATQTSLQEA" FT misc_feature 24167708 FT /note="Clone_right_end: RP11-760M1" FT misc_feature 24205834 FT /note="Clone_left_end: RP11-173N17" FT polyA_signal 24250207..24250212 FT polyA_site 24250226 FT polyA_site 24250232 FT misc_feature 24301407 FT /note="Clone_right_end: RP11-168G12" FT mRNA join(AL354815.10:154985..155463,24164289..24164391, FT 24167484..24167594,24190006..24190184,24200846..24200931, FT 24233189..24233353,24234504..24234629,24242119..24242221, FT 24242831..24243236,24247511..24249028) FT /gene="TNFRSF19" FT /locus_tag="RP11-168G12.1-004" FT /product="tumor necrosis factor receptor superfamily, FT member 19" FT /note="match: cDNAs: Em:BC047321.1" FT /note="match: ESTs: Em:DA192370.1" FT mRNA join(AL354815.10:163974..164144,24159595..24159684, FT 24164289..24164391,24167484..24167594,24168366..24168550) FT /gene="TNFRSF19" FT /locus_tag="RP11-168G12.1-003" FT /product="tumor necrosis factor receptor superfamily, FT member 19" FT /note="match: cDNAs: Em:BC035796.1" FT mRNA join(AL354815.10:163975..164144,24164289..24164391, FT 24167484..24167594,24190006..24190184,24200846..24200931, FT 24233189..24233353,24234504..24234629,24242119..24242221, FT 24242831..24243412) FT /gene="TNFRSF19" FT /locus_tag="RP11-168G12.1-001" FT /product="tumor necrosis factor receptor superfamily, FT member 19" FT /note="match: cDNAs: Em:AF167555.1" FT /note="match: ESTs: Em:CD654665.1 Em:DA753166.1 FT Em:DB070677.1 Em:DB222789.1 Em:DB224147.1 Em:DB239235.1 FT Em:DB291895.1 Em:W56629.1" FT mRNA join(AL354815.10:163995..164144,24164289..24164391, FT 24167484..24167594,24190006..24190184,24200846..24200931, FT 24233189..24233353,24234504..24234629,24242119..24242221, FT 24242831..24243236,24247511..24250232) FT /gene="TNFRSF19" FT /locus_tag="RP11-168G12.1-002" FT /product="tumor necrosis factor receptor superfamily, FT member 19" FT /note="match: cDNAs: Em:AY358888.1" FT /note="match: ESTs: Em:BM473137.1 Em:BM555827.1 FT Em:CK903007.1 Em:CN304089.1 Em:DB084653.1" FT misc_feature 24301508..24383171 FT /note="annotated region of clone" FT polyA_site complement(24304328) FT polyA_signal complement(24304344..24304349) FT misc_feature 24305115 FT /note="Clone_left_end: RP11-520L19" FT mRNA complement(join(24304328..24304584,24330684..24330969)) FT /gene="MIPEP" FT /locus_tag="RP11-173N17.1-005" FT /product="mitochondrial intermediate peptidase" FT /note="match: ESTs: Em:AI201673 Em:AW005754 Em:BM678777 FT Em:BM720497" FT mRNA complement(join(24304328..24304584,24330684..24330757, FT 24334235..24334356,24334672..>24334712)) FT /gene="MIPEP" FT /locus_tag="RP11-173N17.1-004" FT /product="mitochondrial intermediate peptidase" FT /note="match: ESTs: Em:AI141782" FT CDS complement(join(24304546..24304584,24330684..24330757, FT 24334235..24334356,24334672..>24334712)) FT /codon_start=1 FT /gene="MIPEP" FT /locus_tag="RP11-173N17.1-004" FT /standard_name="OTTHUMP00000018122" FT /product="mitochondrial intermediate peptidase" FT /protein_id="CAI39628.1" FT /translation="HTLASTFPPLPRYQPGSCDSATSWGMVLDITLTSCPERSPPWFGR FT SVFYRILSTGLPGSAIAGRCWPTVEAGSPCSWLKVCFRSVLLLMTS" FT CDS complement(24340073..24340243) FT /pseudo FT /locus_tag="RP11-173N17.2-001" FT /product="pseudogene similar to part of mitochondrially FT encoded cytochrome c oxidase III MT-CO3" FT /note="match: proteins: Sw:O21331 Sw:P38597 Sw:P92665 FT Sw:Q00529 Sw:Q36860 Tr:Q7GIK1 Tr:Q7JCA9 Tr:Q8SK58 Tr:Q8WCC6 FT Tr:Q94YD8 Tr:Q9B0P5 Tr:Q9B1P1 Tr:Q9B317 Tr:Q9B318 Tr:Q9B319 FT Tr:Q9B328 Tr:Q9B7D0 Tr:Q9B7D1 Tr:Q9G3E5 Tr:Q9G3R7 Tr:Q9G7S0 FT Tr:Q9MJB0 Tr:Q9TEG5 Tr:Q9XMJ1 Tr:Q9XN26 Tr:Q9XN34" FT mRNA complement(join(24304328..24304584,24330684..24330757, FT 24334235..24334356,24380089..24380208,AL157368.7:918..992, FT AL445985.10:3271..3380,AL445985.10:4583..4787, FT AL445985.10:6680..6757,AL445985.10:8366..8519, FT AL445985.10:25891..25943,AL445985.10:29333..29393, FT AL445985.10:31172..31220,AL445985.10:36323..36479, FT AL445985.10:37044..37226,AL445985.10:41877..41940, FT AL445985.10:46299..46385,AL445985.10:48730..48818, FT AL445985.10:53364..53537,AL445985.10:56163..56450)) FT /gene="MIPEP" FT /locus_tag="RP11-173N17.1-001" FT /product="mitochondrial intermediate peptidase" FT /note="match: ESTs: Em:BG214887.1 Em:BG576150.1 FT Em:BX106440.1 Em:CB306711.1 Em:CF147227.1 Em:CN294807.1 FT Em:DA000292.1" FT /note="match: cDNAs: Em:BC009934.2 Em:CR616891.1 FT Em:CR857347.1 Em:U80034.1" FT CDS complement(join(24304487..24304584,24330684..24330757, FT 24334235..24334356,24380089..24380208,AL157368.7:918..992, FT AL445985.10:3271..3380,AL445985.10:4583..4787, FT AL445985.10:6680..6757,AL445985.10:8366..8519, FT AL445985.10:25891..25943,AL445985.10:29333..29393, FT AL445985.10:31172..31220,AL445985.10:36323..36479, FT AL445985.10:37044..37226,AL445985.10:41877..41940, FT AL445985.10:46299..46385,AL445985.10:48730..48818, FT AL445985.10:53364..53537,AL445985.10:56163..56351)) FT /gene="MIPEP" FT /locus_tag="RP11-173N17.1-001" FT /standard_name="OTTHUMP00000018121" FT /product="mitochondrial intermediate peptidase" FT /note="match: proteins: Sw:Q99797.1 Tr:Q5RF14.1 Tr:Q5T9Q9.1 FT Tr:Q96G65.1" FT /protein_id="CAI39630.1" FT /translation="MLCVGRLGGLGARAAALPPRRAGRGSLEAGIRARRVSTSWSPVGA FT AFNVKPQGSRLDLFGERRGLFGVPELSAPEGFHIAQEKALRKTELLVDRACSTPPGPQT FT VLIFDELSDSLCRVADLADFVKIAHPEPAFREAAEEACRSIGTMVEKLNTNVDLYQSLQ FT KLLADKKLVDSLDPETRRVAELFMFDFEISGIHLDKEKRKRAVDLNVKILDLSSTFLMG FT TNFPNKIEKHLLPEHIRRNFTSAGDHIIIDGLHAESPDDLVREAAYKIFLYPNAGQLKC FT LEELLSSRDLLAKLVGYSTFSHRALQGTIAKNPETVMQFLEKLSDKLSERTLKDFEMIR FT GMKMKLNPQNSEVMPWDPPYYSGVIRAERYNIEPSLYCPFFSLGACMEGLNILLNRLLG FT ISLYAEQPAKGEVWSEDVRKLAVVHESEGLLGYIYCDFFQRADKPHQDCHFTIRGGRLK FT EDGDYQLPVVVLMLNLPRSSRSSPTLLTPSMMENLFHEMGHAMHSMLGRTRYQHVTGTR FT CPTDFAEVPSILMEYFANDYRVVNQFARHYQTGQPLPKNMVSRLCESKKVCAAADMQLQ FT VFYATLDQIYHGKHPLRNSTTDILKETQEKFYGLPYVPNTAWQLRFSHLVGYGARYYSY FT LMSRAVASMVWKECFLQDPFNRAAGERYRREMLAHGGGREPMLMVEGMLQKCPSVDDFV FT SALVSDLDLDFETFLMDSE" FT misc_feature 24383071 FT /note="Clone_right_end: RP11-173N17" FT misc_feature 24383172..24407208 FT /note="annotated region of clone" FT misc_feature 24407009 FT /note="Clone_left_end: RP11-45B20" FT mRNA complement(join(AL139080.11:2921..3177, FT AL139080.11:29277..29350,AL139080.11:32828..32949, FT AL139080.11:78682..78801,24383989..24384063, FT AL445985.10:3271..3380,AL445985.10:4583..4787, FT AL445985.10:6680..6757,AL445985.10:8366..8519, FT AL445985.10:25891..25943,AL445985.10:29333..29393, FT AL445985.10:31172..31220,AL445985.10:36323..36479, FT AL445985.10:37044..37226,AL445985.10:41877..41940, FT AL445985.10:46299..46385,AL445985.10:48730..48818, FT AL445985.10:53364..53537,AL445985.10:56163..56450)) FT /gene="MIPEP" FT /locus_tag="RP11-173N17.1-001" FT /product="mitochondrial intermediate peptidase" FT /note="match: cDNAs: Em:BC009934.2 Em:CR616891.1 FT Em:CR857347.1 Em:U80034.1" FT /note="match: ESTs: Em:BG214887.1 Em:BG576150.1 FT Em:BX106440.1 Em:CB306711.1 Em:CF147227.1 Em:CN294807.1 FT Em:DA000292.1" FT CDS complement(join(AL139080.11:3080..3177, FT AL139080.11:29277..29350,AL139080.11:32828..32949, FT AL139080.11:78682..78801,24383989..24384063, FT AL445985.10:3271..3380,AL445985.10:4583..4787, FT AL445985.10:6680..6757,AL445985.10:8366..8519, FT AL445985.10:25891..25943,AL445985.10:29333..29393, FT AL445985.10:31172..31220,AL445985.10:36323..36479, FT AL445985.10:37044..37226,AL445985.10:41877..41940, FT AL445985.10:46299..46385,AL445985.10:48730..48818, FT AL445985.10:53364..53537,AL445985.10:56163..56351)) FT /gene="MIPEP" FT /locus_tag="RP11-173N17.1-001" FT /standard_name="OTTHUMP00000018121" FT /product="mitochondrial intermediate peptidase" FT /note="match: proteins: Sw:Q99797.1 Tr:Q5RF14.1 Tr:Q5T9Q9.1 FT Tr:Q96G65.1" FT /protein_id="CAI15091.1" FT /translation="MLCVGRLGGLGARAAALPPRRAGRGSLEAGIRARRVSTSWSPVGA FT AFNVKPQGSRLDLFGERRGLFGVPELSAPEGFHIAQEKALRKTELLVDRACSTPPGPQT FT VLIFDELSDSLCRVADLADFVKIAHPEPAFREAAEEACRSIGTMVEKLNTNVDLYQSLQ FT KLLADKKLVDSLDPETRRVAELFMFDFEISGIHLDKEKRKRAVDLNVKILDLSSTFLMG FT TNFPNKIEKHLLPEHIRRNFTSAGDHIIIDGLHAESPDDLVREAAYKIFLYPNAGQLKC FT LEELLSSRDLLAKLVGYSTFSHRALQGTIAKNPETVMQFLEKLSDKLSERTLKDFEMIR FT GMKMKLNPQNSEVMPWDPPYYSGVIRAERYNIEPSLYCPFFSLGACMEGLNILLNRLLG FT ISLYAEQPAKGEVWSEDVRKLAVVHESEGLLGYIYCDFFQRADKPHQDCHFTIRGGRLK FT EDGDYQLPVVVLMLNLPRSSRSSPTLLTPSMMENLFHEMGHAMHSMLGRTRYQHVTGTR FT CPTDFAEVPSILMEYFANDYRVVNQFARHYQTGQPLPKNMVSRLCESKKVCAAADMQLQ FT VFYATLDQIYHGKHPLRNSTTDILKETQEKFYGLPYVPNTAWQLRFSHLVGYGARYYSY FT LMSRAVASMVWKECFLQDPFNRAAGERYRREMLAHGGGREPMLMVEGMLQKCPSVDDFV FT SALVSDLDLDFETFLMDSE" FT misc_feature 24407209..24585639 FT /note="annotated region of clone" FT mRNA complement(join(24416409..24416708,24432999..24433051, FT 24436441..24436501,24438280..24438328,24443431..24443587, FT 24444152..24444334)) FT /gene="MIPEP" FT /locus_tag="RP11-173N17.1-003" FT /product="mitochondrial intermediate peptidase" FT /note="match: ESTs: Em:BM753378 Em:BM765068" FT mRNA complement(join(24455838..24455926,24460472..24460645, FT 24462817..24463537)) FT /gene="MIPEP" FT /locus_tag="RP11-173N17.1-002" FT /product="mitochondrial intermediate peptidase" FT /note="match: ESTs: Em:AU120649 Em:BG723370 Em:BI464994" FT mRNA join(24463028..24463150,24464139..24464181, FT 24465524..24465670,24465752..24466243) FT /locus_tag="RP11-45B20.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AA883836 Em:AI032401 Em:AI217963 FT Em:AW973741 Em:BE041602 Em:BG032839 Em:BG178505" FT mRNA complement(join(AL139080.11:2921..3177, FT AL139080.11:29277..29350,AL139080.11:32828..32949, FT AL139080.11:78682..78801,AL157368.7:918..992, FT 24410379..24410488,24411691..24411895,24413788..24413865, FT 24415474..24415627,24432999..24433051,24436441..24436501, FT 24438280..24438328,24443431..24443587,24444152..24444334, FT 24448985..24449048,24453407..24453493,24455838..24455926, FT 24460472..24460645,24463271..24463558)) FT /gene="MIPEP" FT /locus_tag="RP11-173N17.1-001" FT /product="mitochondrial intermediate peptidase" FT /note="match: ESTs: Em:BG214887.1 Em:BG576150.1 FT Em:BX106440.1 Em:CB306711.1 Em:CF147227.1 Em:CN294807.1 FT Em:DA000292.1" FT /note="match: cDNAs: Em:BC009934.2 Em:CR616891.1 FT Em:CR857347.1 Em:U80034.1" FT CDS complement(join(AL139080.11:3080..3177, FT AL139080.11:29277..29350,AL139080.11:32828..32949, FT AL139080.11:78682..78801,AL157368.7:918..992, FT 24410379..24410488,24411691..24411895,24413788..24413865, FT 24415474..24415627,24432999..24433051,24436441..24436501, FT 24438280..24438328,24443431..24443587,24444152..24444334, FT 24448985..24449048,24453407..24453493,24455838..24455926, FT 24460472..24460645,24463271..24463459)) FT /gene="MIPEP" FT /locus_tag="RP11-173N17.1-001" FT /standard_name="OTTHUMP00000018121" FT /product="mitochondrial intermediate peptidase" FT /note="match: proteins: Sw:Q99797.1 Tr:Q5RF14.1 Tr:Q5T9Q9.1 FT Tr:Q96G65.1" FT /protein_id="CAM20040.1" FT /translation="MLCVGRLGGLGARAAALPPRRAGRGSLEAGIRARRVSTSWSPVGA FT AFNVKPQGSRLDLFGERRGLFGVPELSAPEGFHIAQEKALRKTELLVDRACSTPPGPQT FT VLIFDELSDSLCRVADLADFVKIAHPEPAFREAAEEACRSIGTMVEKLNTNVDLYQSLQ FT KLLADKKLVDSLDPETRRVAELFMFDFEISGIHLDKEKRKRAVDLNVKILDLSSTFLMG FT TNFPNKIEKHLLPEHIRRNFTSAGDHIIIDGLHAESPDDLVREAAYKIFLYPNAGQLKC FT LEELLSSRDLLAKLVGYSTFSHRALQGTIAKNPETVMQFLEKLSDKLSERTLKDFEMIR FT GMKMKLNPQNSEVMPWDPPYYSGVIRAERYNIEPSLYCPFFSLGACMEGLNILLNRLLG FT ISLYAEQPAKGEVWSEDVRKLAVVHESEGLLGYIYCDFFQRADKPHQDCHFTIRGGRLK FT EDGDYQLPVVVLMLNLPRSSRSSPTLLTPSMMENLFHEMGHAMHSMLGRTRYQHVTGTR FT CPTDFAEVPSILMEYFANDYRVVNQFARHYQTGQPLPKNMVSRLCESKKVCAAADMQLQ FT VFYATLDQIYHGKHPLRNSTTDILKETQEKFYGLPYVPNTAWQLRFSHLVGYGARYYSY FT LMSRAVASMVWKECFLQDPFNRAAGERYRREMLAHGGGREPMLMVEGMLQKCPSVDDFV FT SALVSDLDLDFETFLMDSE" FT mRNA join(24465598..24465670,24471008..24471402) FT /locus_tag="RP11-45B20.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF512098" FT polyA_signal 24466219..24466224 FT polyA_site 24466242 FT polyA_site 24466243 FT CDS complement(join(24465616..24465650,24466165..24466200, FT 24468278..24468340,24470960..24471125)) FT /gene="RP11-45B20.2" FT /locus_tag="RP11-45B20.2-002" FT /standard_name="OTTHUMP00000018120" FT /product="novel protein containing a Collagen triple helix FT repeat (20 copies)" FT /protein_id="CAM20041.1" FT /translation="MRIWWLLLAIEICTGNINSQDTCRQGHPGIPGNPGHNGLPGRDGR FT DGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGMFRCLWSKTE" FT CDS complement(join(24465428..24466200,24468278..24468340, FT 24470960..24471125)) FT /gene="RP11-45B20.2" FT /locus_tag="RP11-45B20.2-001" FT /standard_name="OTTHUMP00000018118" FT /product="novel protein containing a Collagen triple helix FT repeat (20 copies)" FT /note="match: proteins: Sw:P25067 Sw:P83371 Sw:P98085 FT Sw:Q03692 Sw:Q05306 Sw:Q9BXJ2 Sw:Q9BXJ5 Tr:Q9D8U4 FT Tr:Q9N178" FT /protein_id="CAM20042.1" FT /translation="MRIWWLLLAIEICTGNINSQDTCRQGHPGIPGNPGHNGLPGRDGR FT DGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKG FT LAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPK FT GEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDVPIK FT FDKILYNEFNHYDTAVGKFTCHIAGVYYFTYHITVFSRNVQVSLVKNGVKILHTRDAYV FT SSEDQASGSIVLQLKLGDEMWLQVTGGERFNGLFADEDDDTTFTGFLLFSSQ" FT polyA_signal 24471376..24471381 FT polyA_site 24471402 FT mRNA complement(join(24465238..24465650,24466165..24466200, FT 24468278..24468340,24470960..24471145,24471261..24471365, FT 24471557..24471641)) FT /gene="RP11-45B20.2" FT /locus_tag="RP11-45B20.2-002" FT /product="novel protein containing a Collagen triple helix FT repeat (20 copies)" FT /note="match: ESTs: Em:BQ072381" FT mRNA complement(join(24465428..24466200,24468278..24468340, FT 24470960..24471145,24472018..24472024,24476756..24476794)) FT /gene="RP11-45B20.2" FT /locus_tag="RP11-45B20.2-001" FT /product="novel protein containing a Collagen triple helix FT repeat (20 copies)" FT /note="match: ESTs: Em:BI833629" FT /note="match: cDNAs: Em:BC040438.1" FT misc_feature 24477237..24477880 FT /note="Sequence from overlapping clone AL157368.Assembly FT confirmed by restriction digest" FT misc_feature 24490160 FT /note="Clone_left_end: RP11-309I15" FT misc_feature 24490270 FT /note="Clone_right_end: RP11-520L19" FT mRNA complement(join(24513696..24515163,24515429..24515608, FT 24515765..24515879,24519889..24520921)) FT /locus_tag="RP11-45B20.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:DB098218.1" FT /note="match: cDNAs: Em:AK128225.1" FT mRNA complement(join(24515108..24515163,24515429..24515608, FT 24515765..24515879,24519889..24520119,24520305..24520363)) FT /locus_tag="RP11-45B20.4-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BI833282.1 Em:CR746569.1" FT misc_feature 24546304..24546820 FT /note="Sequence from overlapping clone AL139324.Assembly FT confirmed by restriction digest" FT mRNA join(24553949..24554063,24557866..24558073, FT AL139324.19:8167..8201,AL139324.19:24013..24269, FT AL139324.19:24421..24506) FT /locus_tag="RP11-309I15.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI836636 Em:BI836636.1" FT misc_feature 24554249..24554361 FT /note="Sequence from overlapping clone AL139324.Assembly FT confirmed by restriction digest" FT misc_feature 24585539 FT /note="Clone_right_end: RP11-45B20" FT misc_feature 24585640..24699770 FT /note="annotated region of clone" FT misc_feature 24632475 FT /note="Clone_left_end: RP11-300N13" FT CDS complement(24696204..24697953) FT /pseudo FT /locus_tag="RP11-309I15.2-001" FT /product="pseudogene similar to part of importin 7 IPO7" FT /note="match: proteins: Sw:O95373 Sw:P46970 Sw:Q9EPL8 FT Tr:O42480 Tr:O59809 Tr:Q9SIP2 Tr:Q9VSD6" FT misc_feature 24697770 FT /note="Clone_right_end: RP11-309I15" FT mRNA join(AL445985.10:146841..146955,AL445985.10:150758..150965, FT 24591806..24591840,24607652..24607908,24608060..24608145) FT /locus_tag="RP11-309I15.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI836636 Em:BI836636.1" FT misc_feature 24728859 FT /note="Clone_left_end: RP11-307N16" FT misc_feature 24729059..24907808 FT /note="annotated region of clone" FT mRNA join(24734887..24735071,24823615..24823980, FT 24825856..24826000,24858273..24858409,24860352..24860531, FT 24860903..24861088,24863137..24863316,24864790..24865022, FT 24868877..24869006,24871501..24871873,24874539..24874613, FT 24876736..24881210) FT /gene="SPATA13" FT /locus_tag="RP11-307N16.3-001" FT /product="spermatogenesis associated 13" FT /note="match: ESTs: Em:AL707817.1 Em:CD694093.1 FT Em:DA181477.1 Em:DA570008.1 Em:DA968672.1 Em:DB227467.1" FT /note="match: cDNAs: Em:AK055770.1" FT misc_feature 24753707..24753769 FT /note="Sequence from overlapping clone RP11-300N13 FT (AL136963) Assembly confirmed by restriction digest" FT misc_feature 24763585..24764299 FT /note="Sequence from overlapping clone RP11-300N13 FT (AL136963) Assembly confirmed by restriction digest" FT misc_feature 24764300 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 200bp by restriction digest data" FT misc_feature 24764301..24764656 FT /note="Sequence from overlapping clone RP11-300N13 FT (AL136963) Assembly confirmed by restriction digest" FT misc_feature 24764921..24764954 FT /note="Sequence from overlapping clone RP11-300N13 FT (AL136963) Assembly confirmed by restriction digest" FT mRNA join(24798379..24798720,24823615..24823801) FT /gene="SPATA13" FT /locus_tag="RP11-307N16.3-002" FT /product="spermatogenesis associated 13" FT /note="match: ESTs: Em:BI039159 Em:BI710847" FT CDS join(24823837..24823980,24825856..24826000, FT 24858273..24858409,24860352..24860531,24860903..24861088, FT 24863137..24863316,24864790..24865022,24868877..24869006, FT 24871501..24871873,24874539..24874613,24876736..24876911) FT /gene="SPATA13" FT /locus_tag="RP11-307N16.3-001" FT /standard_name="OTTHUMP00000018126" FT /product="spermatogenesis associated 13" FT /note="match: proteins: Sw:Q96N96.1" FT /protein_id="CAH72289.1" FT /translation="MTSASPEDQNAPVGCPKGARRRRPISVIGGVSLYGTNQTEELDNL FT LTQPASRPPMPAHQVPPYKAVSARFRPFTFSQSTPIGLDRVGRRRQMRASNVSSDGGTE FT PSALVDDNGSEEDFSYEDLCQASPRYLQPGGEQLAINELISDGNVVCAEALWDHVTMDD FT QELGFKAGDVIQVLEASNKDWWWGRSEDKEAWFPASFVRLRVNQEELSENSSSTPSEEQ FT DEEASQSRHRHCENKQQMRTNVIREIMDTERVYIKHLRDICEGYIRQCRKHTGMFTVAQ FT LATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQNQEGFAIYSEYCNNHPG FT ACLELANLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQ FT EHGDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGLDILDRSSELIH FT SGELTKITKQGKSQQRTFFLFDHQLVSCKKDLLRRDMLYYKGRLDMDEMELVDLGDGRD FT KDCNLSVKNAFKLVSRTTDEVYLFCAKKQEDKARWLQACADERRRVQEDKEMGMEISEN FT QKKLAMLNAQKAGHGKSKGYNRCPVAPPHQGLHPIHQRHITMPTSVPQQQVFGLAEPKR FT KSSLFWHTFNRLTPFRK" FT mRNA join(24825856..24826000,24852752..24852907) FT /gene="SPATA13" FT /locus_tag="RP11-307N16.3-003" FT /product="spermatogenesis associated 13" FT /note="match: ESTs: Em:BI711167" FT mRNA complement(join(24826887..24827094,24827217..24827337, FT 24828474..24828577)) FT /locus_tag="RP11-307N16.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AV761850.1" FT misc_feature 24836494 FT /note="Clone_right_end: RP11-300N13" FT mRNA join(24844826..24845050,24858273..24858409, FT 24860352..24860531,24860903..24861088,24863137..24863316, FT 24864790..24865022,24868877..24869006,24871501..24871873, FT 24874539..24874613,24876736..24878042) FT /gene="SPATA13" FT /locus_tag="RP11-307N16.3-006" FT /product="spermatogenesis associated 13" FT /note="match: ESTs: Em:BB616159 Em:BB851234" FT /note="match: cDNAs: Em:AK123031.1" FT mRNA join(24844979..24845050,24852752..24852959, FT 24858273..24858409,24860352..>24860531) FT /gene="SPATA13" FT /locus_tag="RP11-307N16.3-005" FT /product="spermatogenesis associated 13" FT /note="match: ESTs: Em:AL710545 Em:AL710546" FT CDS join(24844996..24845050,24858273..24858409, FT 24860352..24860531,24860903..24861088,24863137..24863316, FT 24864790..24865022,24868877..24869006,24871501..24871873, FT 24874539..24874613,24876736..24876911) FT /gene="SPATA13" FT /locus_tag="RP11-307N16.3-006" FT /standard_name="OTTHUMP00000018128" FT /product="spermatogenesis associated 13" FT /protein_id="CAH72290.2" FT /translation="MVARGEIARFWSLESLHLVSSDGGTEPSALVDDNGSEEDFSYEDL FT CQASPRYLQPGGEQLAINELISDGNVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNK FT DWWWGRSEDKEAWFPASFVRLRVNQEELSENSSSTPSEEQDEEASQSRHRHCENKQQMR FT TNVIREIMDTERVYIKHLRDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFL FT KDLEKQYNKEEPHLSEIGSCFLQNQEGFAIYSEYCNNHPGACLELANLMKQGKYRHFFE FT ACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHGDYSNIKAAYEAMKNVA FT CLINERKRKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKITKQGKSQQRTFF FT LFDHQLVSCKKDLLRRDMLYYKGRLDMDEMELVDLGDGRDKDCNLSVKNAFKLVSRTTD FT EVYLFCAKKQEDKARWLQACADERRRVQEDKEMGMEISENQKKLAMLNAQKAGHGKSKG FT YNRCPVAPPHQGLHPIHQRHITMPTSVPQQQVFGLAEPKRKSSLFWHTFNRLTPFRK" FT mRNA join(24846827..24847275,24852752..24852907) FT /gene="SPATA13" FT /locus_tag="RP11-307N16.3-004" FT /product="spermatogenesis associated 13" FT /note="match: ESTs: Em:AW206404 Em:BE502293" FT CDS join(24852839..24852959,24858273..24858409, FT 24860352..>24860531) FT /gene="SPATA13" FT /locus_tag="RP11-307N16.3-005" FT /standard_name="OTTHUMP00000018127" FT /product="spermatogenesis associated 13" FT /protein_id="CAH72291.1" FT /translation="MGFIIHIQQVKKQRKKLDQGLILKKEKYRKEKKCASLSFEVSSDG FT GTEPSALVDDNGSEEDFSYEDLCQASPRYLQPGGEQLAINELISDGNVVCAEALWDHVT FT MDDQELGFKAGDVIQVLEASNKDWWWGRSEDKEAWFPASFVR" FT polyA_signal 24881188..24881193 FT polyA_site 24881210 FT mRNA join(24881304..24881366,24890120..24890307, FT 24892956..24893018,24895134..24896673) FT /gene="C1QTNF9" FT /locus_tag="RP11-307N16.1-002" FT /product="C1q and tumor necrosis factor related protein 9" FT /note="match: ESTs: Em:BI767787" FT mRNA join(24883716..24883754,24890120..24890307, FT 24892956..24893018,24895134..24896673) FT /gene="C1QTNF9" FT /locus_tag="RP11-307N16.1-001" FT /product="C1q and tumor necrosis factor related protein 9" FT /note="match: ESTs: Em:BI833629.1 Em:CA425716.1" FT /note="match: cDNAs: Em:AY358145.1 Em:BC040438.1" FT mRNA join(24889624..24889708,24889899..24890004, FT 24890120..24890307,24892956..24893018,24895134..24895169, FT 24895684..24896097) FT /gene="C1QTNF9" FT /locus_tag="RP11-307N16.1-003" FT /product="C1q and tumor necrosis factor related protein 9" FT /note="match: ESTs: Em:BQ072381" FT polyA_site complement(24889863) FT polyA_signal complement(24889878..24889883) FT CDS join(24890142..24890307,24892956..24893018, FT 24895134..24895169,24895684..24895718) FT /gene="C1QTNF9" FT /locus_tag="RP11-307N16.1-003" FT /standard_name="OTTHUMP00000018125" FT /product="C1q and tumor necrosis factor related protein 9" FT /note="match: proteins: Tr:O16640.2" FT /protein_id="CAH72292.1" FT /translation="MRIWWLLLAIEICTGNINSQDTCRQGHPGIPGNPGHNGLPGRDGR FT DGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKEMFRCLWSKME" FT CDS join(24890142..24890307,24892956..24893018, FT 24895134..24895906) FT /gene="C1QTNF9" FT /locus_tag="RP11-307N16.1-001" FT /standard_name="OTTHUMP00000018123" FT /product="C1q and tumor necrosis factor related protein 9" FT /note="match: proteins: Sw:Q5VX65.1 Tr:Q8IUU4.1" FT /protein_id="CAH72293.1" FT /translation="MRIWWLLLAIEICTGNINSQDTCRQGHPGIPGNPGHNGLPGRDGR FT DGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKG FT LAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPK FT GEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIK FT FDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYM FT SSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGFLLFSSP" FT mRNA complement(join(24889863..24890259,24895664..24895736)) FT /locus_tag="RP11-307N16.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF512098" FT polyA_signal 24896078..24896083 FT polyA_site 24896094 FT polyA_signal 24896635..24896640 FT polyA_site 24896673 FT CDS 24902349..24903210 FT /pseudo FT /locus_tag="RP11-307N16.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q96E22 Tr:Q99LJ8" FT misc_feature 24905709 FT /note="Clone_left_end: RP11-169O17" FT misc_feature 24907809..25096573 FT /note="annotated region of clone" FT misc_feature 24928820..24928822 FT /note="Forced join. Forced join in tandem rpt - digest FT shows approx 600 bp missing" FT CDS 24974841..24975167 FT /pseudo FT /locus_tag="RP11-169O17.1-001" FT /product="cytochrome c pseuodgene" FT /note="match: proteins: Sw:O13393 Sw:O93863 Sw:P00007 FT Sw:P00008 Sw:P00011 Sw:P00012 Sw:P00013 Sw:P00014 Sw:P00017 FT Sw:P00020 Sw:P00021 Sw:P00042 Sw:P00043 Sw:P00077 Sw:P19681 FT Sw:P32556 Sw:P35398 Sw:P53698 Sw:P62896 Sw:P62898 Sw:P68096 FT Sw:P68098 Sw:Q41346 Tr:Q9ZDS2" FT /db_xref="PSEUDO:CAC21560.1" FT CDS join(24982295..24982360,24983174..24983251, FT 24983354..24983442,AL359538.8:59326..59387, FT AL359538.8:61167..61247,AL359538.8:64891..64991, FT AL359538.8:66921..67012,AL359538.8:71936..72028, FT AL359538.8:73454..73524,AL359538.8:75052..75325) FT /pseudo FT /locus_tag="RP11-556N21.4-001" FT /product="TPTE and PTEN homologous inositol lipid FT phosphatase (TPIP) pseudogene" FT /note="match: proteins: Sw:P56180 Sw:Q6XPS3 Sw:Q6XPS3 FT Tr:Q91X01 Tr:Q91X02 Tr:Q91X03" FT mRNA join(24993688..24993849,24994273..24995180) FT /locus_tag="RP11-169O17.5-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:BC017420" FT polyA_site complement(24995064) FT polyA_site complement(24995069) FT polyA_signal complement(24995084..24995089) FT misc_feature 25022513 FT /note="Clone_left_end: RP11-556N21" FT mRNA complement(join(25026110..25026731,25027725..25027792, FT 25029155..25029272)) FT /gene="PARP4" FT /locus_tag="RP11-169O17.2-002" FT /product="poly (ADP-ribose) polymerase family, member 4" FT /note="match: ESTs: Em:AU118574 Em:AW363429 Em:AW363435 FT Em:AW363437" FT mRNA complement(join(25030535..25030616,25033182..25033260, FT 25033402..25033620)) FT /gene="PARP4" FT /locus_tag="RP11-169O17.2-003" FT /product="poly (ADP-ribose) polymerase family, member 4" FT /note="match: ESTs: Em:BI022066" FT CDS complement(join(24995257..24995452,25000604..25000736, FT 25005515..25005614,25008533..25009612,25015984..25016106, FT 25016728..25016823,25017788..25017868,25020819..25020899, FT 25021154..25021324,25023856..25023955,25026544..25026731, FT 25027725..25027792,25029155..25029350,25030479..25030616, FT 25033182..25033260,25033402..25033448,25034110..25034274, FT 25043162..25043248,25044032..25044163,25049610..25049734, FT 25051839..25051995,25052231..25052414,25058791..25058886, FT 25060306..25060443,25064806..25064966,25066559..25066732, FT 25067734..25067871,25068711..25068860,25072254..25072367, FT 25073439..25073514,25074454..25074520,25075771..25075972, FT 25077783..25077914)) FT /gene="PARP4" FT /locus_tag="RP11-169O17.2-001" FT /standard_name="OTTHUMP00000018130" FT /product="poly (ADP-ribose) polymerase family, member 4" FT /note="match: proteins: Sw:Q9UKK3.2 Tr:Q5QNZ9.1" FT /protein_id="CAI12394.1" FT /translation="MVMGIFANCIFCLKVKYLPQQQKKKLQTDIKENGGKFSFSLNPQC FT THIILDNADVLSQYQLNSIQKNHVHIANPDFIWKSIREKRLLDVKNYDPYKPLDITPPP FT DQKASSSEVKTEGLCPDSATEEEDTVELTEFGMQNVEIPHLPQDFEVAKYNTLEKVGME FT GGQEAVVVELQCSRDSRDCPFLISSHFLLDDGMETRRQFAIKKTSEDASEYFENYIEEL FT KKQGFLLREHFTPEATQLASEQLQALLLEEVMNSSTLSQEVSDLVEMIWAEALGHLEHM FT LLKPVNRISLNDVSKAEGILLLVKAALKNGETAEQLQKMMTEFYRLIPHKGTMPKEVNL FT GLLAKKADLCQLIRDMVNVCETNLSKPNPPSLAKYRALRCKIEHVEQNTEEFLRVRKEV FT LQNHHSKSPVDVLQIFRVGRVNETTEFLSKLGNVRPLLHGSPVQNIVGILCRGLLLPKV FT VEDRGVQRTDVGNLGSGIYFSDSLSTSIKYSHPGETDGTRLLLICDVALGKCMDLHEKD FT FSLTEAPPGYDSVHGVSQTASVTTDFEDDEFVVYKTNQVKMKYIIKFSMPGDQIKDFHP FT SDHTELEEYRPEFSNFSKVEDYQLPDAKTSSSTKAGLQDASGNLVPLEDVHIKGRIIDT FT VAQVIVFQTYTNKSHVPIEAKYIFPLDDKAAVCGFEAFINGKHIVGEIKEKEEAQQEYL FT EAVTQGHGAYLMSQDAPDVFTVSVGNLPPKAKVLIKITYITELSILGTVGVFFMPATVA FT PWQQDKALNENLQDTVEKICIKEIGTKQSFSLTMSIEMPYVIEFIFSDTHELKQKRTDC FT KAVISTMEGSSLDSSGFSLHIGLSAAYLPRMWVEKHPEKESEACMLVFQPDLDVDLPDL FT ASESEVIICLDCSSSMEGVTFLQAKQIALHALSLVGEKQKVNIIQFGTGYKELFSYPKH FT ITSNTMAAEFIMSATPTMGNTDFWKTLRYLSLLYPARGSRNILLVSDGHLQDESLTLQL FT VKRSRPHTRLFACGIGSTANRHVLRILSQCGAGVFEYFNAKSKHSWRKQIEDQMTRLCS FT PSCHSVSVKWQQLNPDVPEALQAPAQVPSLFLNDRLLVYGFIPHCTQATLCALIQEKEF FT RTMVSTTELQKTTGTMIHKLAARALIRDYEDGILHENETSHEMKKQTLKSLIIKLSKEN FT SLITQFTSFVAVEKRDENESPFPDIPKVSELIAKEDVDFLPYMSWQGEPQEAVRNQSLL FT ASSEWPELRLSKRKHRKIPFSKRKMELSQPEVSEDFEEDGLGVLPAFTSNLERGGVEKL FT LDLSWTESCKPTATEPLFKKVSPWETSTSSFFPILAPAVGSYLPPTARAHSPASLSFAS FT YRQVASFGSAAPPRQFDASQFSQGPVPGTCADWIPQSASCPTGPPQNPPSSPYCGIVFS FT GSSLSSAQSAPLQHPGGFTTRPSAGTFPELDSPQLHFSLPTDPDPIRGFGSYHPSASSP FT FHFQPSAASLTANLRLPMASALPEALCSQSRTTPVDLCLLEESVGSLEGSRCPVFAFQS FT SDTESDELSEVLQDSCFLQIKCDTKDDSILCFLEVKEEDEIVCIQHWQDAVPWTELLSL FT QTEDGFWKLTPELGLILNLNTNGLHSFLKQKGIQSLGVKGRECLLDLIATMLVLQFIRT FT RLEKEGIVFKSLMKMDDASISRNIPWAFEAIKQASEWVRRTEGQYPSICPRLELGNDWD FT SATKQLLGLQPISTVSPLHRVLHYSQG" FT mRNA complement(join(24995064..24995452,25000604..25000736, FT 25005515..25005614,25008533..25009612,25015984..25016106, FT 25016728..25016823,25017788..25017868,25020819..25020899, FT 25021154..25021324,25023856..25023955,25026544..25026731, FT 25027725..25027792,25029155..25029350,25030479..25030616, FT 25033182..25033260,25033402..25033448,25034110..25034274, FT 25043162..25043248,25044032..25044163,25049610..25049734, FT 25051839..25051995,25052231..25052414,25058791..25058886, FT 25060306..25060443,25064806..25064966,25066559..25066732, FT 25067734..25067871,25068711..25068860,25072254..25072367, FT 25073439..25073514,25074454..25074520,25075771..25075972, FT 25077783..25077915,25086844..25086948)) FT /gene="PARP4" FT /locus_tag="RP11-169O17.2-001" FT /product="poly (ADP-ribose) polymerase family, member 4" FT /note="match: ESTs: Em:AU132924.1 Em:BE162965.1 FT Em:BQ641781.1 Em:BU179859.1 Em:BX102015.1 Em:BX425814.2 FT Em:BX436890.2 Em:BX484470.1 Em:BX509186.1 Em:CB142637.1 FT Em:CN407710.1 Em:DA970661.1 Em:DB238428.1" FT /note="match: cDNAs: Em:AF057160.1 Em:AF158255.1 FT Em:BC017815.1 Em:D79999.2" FT misc_feature 25094573 FT /note="Clone_right_end: RP11-169O17" FT misc_feature 25096574..25205118 FT /note="annotated region of clone" FT misc_feature 25101530 FT /note="Clone_left_end: RP11-31H2" FT CDS join(25140981..25141036,25144698..25144866) FT /pseudo FT /locus_tag="RP11-556N21.2-001" FT /product="Paraspeckle protein 1 alpha isoform pseudogene" FT /note="match: proteins: Tr:Q8R326 Tr:Q8WXF1 Tr:Q9CYH1" FT mRNA join(25141011..25141038,25141422..25141534, FT 25143348..25143447,25144701..25144870,25155799..25155860, FT 25157640..25157720,25160600..25160932,25161364..25161464, FT 25163394..25163485,25168409..25168501,25169927..25169997, FT 25171240..25171415,25171525..25171814) FT /locus_tag="RP11-556N21.1-001" FT /product="novel transcript similar to TPTE and PTEN FT homologous inositol lipid phosphatase (TPIP)" FT /note="match: cDNAs: Em:AL137411" FT /note="match: ESTs: Em:AL043520 Em:AL043529" FT mRNA join(25160142..25160932,25161364..25161464, FT 25168409..25168501,25171525..25171814) FT /locus_tag="RP11-556N21.1-002" FT /product="novel transcript similar to TPTE and PTEN FT homologous inositol lipid phosphatase (TPIP)" FT /note="match: cDNAs: Em:AL122103" FT mRNA join(25161362..25161464,25163394..25163485, FT 25168409..25168501,25169927..25169997,25171525..25171814) FT /locus_tag="RP11-556N21.1-003" FT /product="novel transcript similar to TPTE and PTEN FT homologous inositol lipid phosphatase (TPIP)" FT /note="match: ESTs: Em:AL043530" FT polyA_signal 25171794..25171799 FT polyA_site 25171814 FT CDS join(AL359763.9:76487..76552,AL359763.9:77366..77443, FT AL359763.9:77546..77634,25155799..25155860, FT 25157640..25157720,25161364..25161464,25163394..25163485, FT 25168409..25168501,25169927..25169997,25171525..25171798) FT /pseudo FT /locus_tag="RP11-556N21.4-001" FT /product="TPTE and PTEN homologous inositol lipid FT phosphatase (TPIP) pseudogene" FT /note="match: proteins: Sw:P56180 Sw:Q6XPS3 Sw:Q6XPS3 FT Tr:Q91X01 Tr:Q91X02 Tr:Q91X03" FT misc_feature 25205018 FT /note="Clone_right_end: RP11-556N21" FT misc_feature 25205119..25296249 FT /note="annotated region of clone" FT mRNA join(25254715..25254890,25255700..25255858, FT 25259452..25259511,25262457..25262660,25263400..25263513, FT 25264476..25264610,25264742..25264859,25265120..25265388, FT 25266567..25266765,25266925..25267034,25268582..25268716, FT 25272796..25272988,25274885..25275060,25276073..25276209, FT 25280451..25280601,25281161..25281329,25281417..25281571, FT 25283502..25283625,25283821..25283966,25284598..25284731, FT 25284930..25285031,25285456..25285547,25285632..25285911) FT /gene="ATP12A" FT /locus_tag="RP11-31H2.1-001" FT /product="ATPase, H+/K+ transporting, nongastric, alpha FT polypeptide" FT /note="match: ESTs: Em:AI015475 Em:AJ450474 Em:AW956606 FT Em:BE768419 Em:BE912947 Em:BI195944 Em:BI736253 Em:BI822551 FT Em:BM472513 Em:BM492041 Em:BM799732 Em:BM944955 Em:BM951186 FT Em:BM982192 Em:BM986328 Em:BQ049301 Em:BQ443197" FT /note="match: cDNAs: Em:AF023128 Em:AF023129 Em:AF106063 FT Em:D21854 Em:M90398 Em:U02076 Em:U94912 Em:U94913" FT CDS join(25254882..25254890,25255700..25255858, FT 25259452..25259511,25262457..25262660,25263400..25263513, FT 25264476..25264610,25264742..25264859,25265120..25265388, FT 25266567..25266765,25266925..25267034,25268582..25268716, FT 25272796..25272988,25274885..25275060,25276073..25276209, FT 25280451..25280601,25281161..25281329,25281417..25281571, FT 25283502..25283625,25283821..25283966,25284598..25284731, FT 25284930..25285031,25285456..25285547,25285632..25285660) FT /gene="ATP12A" FT /locus_tag="RP11-31H2.1-001" FT /standard_name="OTTHUMP00000018132" FT /product="ATPase, H+/K+ transporting, nongastric, alpha FT polypeptide" FT /note="match: proteins: Sw:P54707 Sw:P54708 Sw:Q64392 FT Sw:Q9TV52 Sw:Q9Z1W8 Sw:Q9Z1W8 Tr:O77803 Tr:Q28624" FT /protein_id="CAH72440.1" FT /translation="MHQKTPEIYSVELSGTKDIVKTDKGDGKEKYRGLKNNCLELKKKN FT HKEEFQKELHLDDHKLSNRELEEKYGTDIIMGLSSTRAAELLARDGPNSLTPPKQTPEI FT VKFLKQMVGGFSILLWVGAFLCWIAYGIQYSSDKSASLNNVYLGCVLGLVVILTGIFAY FT YQEAKSTNIMSSFNKMIPQQALVIRDSEKKTIPSEQLVVGDIVEVKGGDQIPADIRVLS FT SQGCRVDNSSLTGESEPQPRSSEFTHENPLETKNICFYSTTCLEGTVTGMVINTGDRTI FT IGHIASLASGVGNEKTPIAIEIEHFVHIVAGVAVSIGILFFIIAVSLKYQVLDSIIFLI FT GIIVANVPEGLLATVTVTLSLTAKRMAKKNCLVKNLEAVETLGSTSIICSDKTGTLTQN FT RMTVAHLWFDNQIFVADTSEDHSNQVFDQSSRTWASLSKIITLCNRAEFKPGQENVPIM FT KKAVIGDASETALLKFSEVILGDVMEIRKRNRKVAEIPFNSTNKFQLSIHEMDDPHGKR FT FLMVMKGAPERILEKCSTIMINGEEHPLDKSTAKTFHTAYMELGGLGERVLGFCHLYLP FT ADEFPETYSFDIDAMNFPTSNLCFVGLLSMIDPPRSTVPDAVTKCRSAGIKVIMVTGDH FT PITAKAIAKSVGIISANSETVEDIAHRLNIAVEQVNKRDAKAAVVTGMELKDMSSEQLD FT EILANYQEIVFARTSPQQKLIIVEGCQRQDAVVAVTGDGVNDSPALKKADIGIAMGIAG FT SDAAKNAADMVLLDDNFASIVTGVEEGRLIFDNLKKTIAYSLTKNIAELCPFLIYIIVG FT LPLPIGTITILFIDLGTDIIPSIALAYEKAESDIMNRKPRHKNKDRLVNQPLAVYSYLH FT IGLMQALGAFLVYFTVYAQEGFLPRTLINLRVEWEKDYVNDLKDSYGQEWTRYQREYLE FT WTGYTAFFVGILVQQIADLIIRKTRRNSIFQQGLFRNKVIWVGITSQIIIGLILSYGLG FT SVTALSFTMLRAQYWFVAVPHAILIWVYDEVRKLFIRLYPGSWWDKNMYY" FT CDS complement(25278540..25278926) FT /pseudo FT /locus_tag="RP11-31H2.2-001" FT /product="ribosomal protein L26 (RPL26) pseudogene" FT /note="match: proteins: Sw:P12749 Sw:P61254 Sw:P61255 FT Sw:Q95WA0 Sw:Q9UNX3 Tr:O77364 Tr:Q90YU2 Tr:Q962T4 FT Tr:Q9VVU2" FT misc_feature 25283572 FT /note="Clone_left_end: RP11-534K14" FT polyA_signal 25285884..25285889 FT polyA_site 25285911 FT misc_feature 25296149 FT /note="Clone_right_end: RP11-31H2" FT misc_feature 25296250..25414378 FT /note="annotated region of clone" FT misc_feature 25310024 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 300bp by restriction digest data" FT CDS 25319405..25320032 FT /pseudo FT /locus_tag="RP11-534K14.1-001" FT /product="irquois homeobox protein pseudogene" FT /note="match: proteins: Sw:P54269 Sw:P78412 Sw:P78413 FT Sw:P78414 Sw:P81066 Sw:Q24248 Sw:Q9ER75 Sw:Q9JKQ4 Sw:Q9QY61 FT Sw:Q9YGS0 Tr:Q90XW6 Tr:Q98TY0 Tr:Q9PU52 Tr:Q9PUR3" FT CDS complement(25324795..25326309) FT /pseudo FT /locus_tag="RP11-534K14.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q5TYW2 Sw:Q811D2 Sw:Q9H560 FT Sw:Q9UPS8 Sw:Q9UPS8" FT mRNA join(25338290..25338471,25341410..25341504, FT 25348951..25349042,25352433..25352544,25353805..25353885, FT 25355982..25356082,25362126..25362297,25363486..25363562, FT 25363836..25363910,25367180..25367484,25370275..25370433, FT 25373533..25373722,25374504..25374672,25376519..25376709, FT 25378426..25378567,25399757..25399910,25404622..25404737, FT 25405996..25406116,AL354798.13:3801..3921, FT AL354798.13:5504..5731,AL354798.13:6412..6562, FT AL354798.13:6721..6839,AL354798.13:12101..12203, FT AL354798.13:13216..13331,AL354798.13:15615..15904, FT AL354798.13:20761..20924,AL354798.13:23028..23147, FT AL354798.13:24473..24553,AL354798.13:26633..26758, FT AL354798.13:27904..27963,AL354798.13:30360..30476, FT AL354798.13:32331..32499,AL354798.13:35874..36009, FT AL354798.13:38757..38946,AL354798.13:40947..41055, FT AL354798.13:41497..41681) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-003" FT /product="ring finger protein 17" FT /note="match: ESTs: Em:AL048865.1 Em:AU136520.1 FT Em:BI459805.1 Em:BU182455.1 Em:BX378977.2 Em:CD358307.1 FT Em:CD557770.1 Em:DB020533.1 Em:DB071896.1 Em:DB075166.1 FT Em:DB081075.1 Em:DB088295.1 Em:DB097489.1" FT /note="match: cDNAs: Em:BC037275.1" FT mRNA join(25338339..25338471,25341410..25341504, FT 25348951..25349042,25352433..25352544,25353805..25353885, FT 25355982..25356082,25362123..25362297,25363486..25363562, FT 25363836..25363910,25367180..25367484,25368293..25368433, FT 25370275..25370380) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-005" FT /product="ring finger protein 17" FT /note="match: cDNAs: Em:AF285603.1" FT mRNA join(25338339..25338471,25341410..25341504, FT 25348951..25349042,25352433..25352544,25353805..25353885, FT 25355982..25356082,25362123..25362297,25363486..25363562, FT 25363836..25363910,25367180..25367484,25370275..25370433, FT 25373533..25373722,25374504..25374672,25376519..25376709, FT 25398334..25398515) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-004" FT /product="ring finger protein 17" FT /note="match: cDNAs: Em:AF285602.1" FT CDS join(25338342..25338471,25341410..25341504, FT 25348951..25349042,25352433..25352544,25353805..25353885, FT 25355982..25356082,25362126..25362297,25363486..25363562, FT 25363836..25363910,25367180..25367484,25370275..25370433, FT 25373533..25373722,25374504..25374672,25376519..25376709, FT 25378426..25378567,25399757..25399910,25404622..25404737, FT 25405996..25406116,AL354798.13:3801..3921, FT AL354798.13:5504..5731,AL354798.13:6412..6562, FT AL354798.13:6721..6839,AL354798.13:12101..12203, FT AL354798.13:13216..13331,AL354798.13:15615..15904, FT AL354798.13:20761..20924,AL354798.13:23028..23147, FT AL354798.13:24473..24553,AL354798.13:26633..26758, FT AL354798.13:27904..27963,AL354798.13:30360..30476, FT AL354798.13:32331..32499,AL354798.13:35874..36009, FT AL354798.13:38757..38946,AL354798.13:40947..41045) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-003" FT /standard_name="OTTHUMP00000018141" FT /product="ring finger protein 17" FT /protein_id="CAI15248.2" FT /translation="MAAEASKTGPSRSSYQRMGRKSQPWGAAEIQCTRCGRRVSRSSGH FT HCELQCGHAFCELCLLMTEECTTIICPDCEVATAVNTRQRYYPMAGYIKEDSIMEKLQP FT KTIKNCSQDFKKTADQLTTGLERSASTDKTLLNSSAVMLDTNTAEEIDEALNTAHHSFE FT QLSIAGKALEHMQKQTIEERERVIEVVEKQFDQLLAFFDSRKKNLCEEFARTTDDYLSN FT LIKAKSYIEEKKNNLNAAMNIARALQLSPSLRTYCDLNQIIRTLQLTSDSELAQVSSPQ FT LRNPPRLSVNCSEIICMFNNMGKIEFRDSTKCYPQENEIRQNVQKKYNNKKELSCYDTY FT PPLEKKKVDMSVLTSEAPPPPLQPETNDVHLEAKNFQPQKDVATASPKTIAVLPQMGSS FT PDVIIEEIIEDNVESSAELVFVSHVIDPCHFYIRKYSQIKDAKVLEKKVNEFCNRSSHL FT DPSDILELGARIFVSSIKNGMWCRGTITELIPIEGRNTRKPCSPTRLFVHEVALIQIFM FT VDFGNSEVLIVTGVVDTHVRPEHSAKQHIALNDLCLVLRKSEPYTEGLLKDIQPLAQPC FT SLKDIVPQNSNEGWEEEAKVEFLKMVNNKAVSMKVFREEDGVLIVDLQKPPPNKISSDM FT PVSLRDALVFMELAKFKSQSLRSHFEKNTTLHYHPPILPKEMTDVSVTVCHINSPGDFY FT LQLIEGLDILFLLKTIEEFYKSEDGENLEILCPVQDQACVAKFEDGIWYRAKVIGLPGH FT QEVEVKYVDFGNTAKITIKDVRKIKDEFLNAPEKAIKCKLAYIEPYKRTMQWSKEAKEK FT FEEKAQDKFMTCSVIKILEDNVLLVELFDSLGAPEMTTTSINDQLVKEGLASYEIGYIL FT KDNSQKHIEVWDPSPEEIISNEVHNLNPVSAKSLPNENFQSLYNKELPVHICNVISPEK FT IYVQWLLTENLLNSLEEKMIAAYENSKWEPVKWENDMHCAVKIQDKNQWRRGQIIRMVT FT DTLVEVLLYDVGVELVVNVDCLRKLEENLKTMGRLSLECSLVDIRPAGGSDKWTATACD FT CLSLYLTGAVATIILQVDSEENNTTWPLPVKIFCRDEKGERVDVSKYLIKKGLALRERR FT INNLDNSHSLSEKSLEVPLEQEDSVVTNCIKTNFDPDKKTADIISEQKVSEFQEKILEP FT RTTRGYKPPAIPNMNVFEATVSCVGDDGTIFVVPKLSEFELIKMTNEIQSNLKCLGLLE FT PYFWKKGEACAVRGSDTLWYRGKVMEVVGGAVRVQYLDHGFTEKIPQCHLYPILLYPDI FT PQFCIPCQLHNTTPVGNVWQPDAIEVLQQLLSKRQVDIHIMELPKNPWEKLSIHLYFDG FT MSLSYFMAYYKYCTSEHTEEMLKEKPRSDHDKKYEEEQWEIRFEELLSAETDTPLLPPY FT LSSSLPSPGELYAVQVKHVVSPNEVYICLDSIETSNQSNQHSDTDDSGVSGESESESLD FT EALQRVNKKVEALPPLTDFRTEMPCLAEYDDGLWYRAKIVAIKEFNPLSILVQFVDYGS FT TAKLTLNRLCQIPSHLMRYPARAIKVLLAGFKPPLRDLGETRIPYCPKWSMEALWAMID FT CLQGKQLYAVSMAPAPEQIVTLYDDEQHPVHMPLVEMGLADKDE" FT CDS join(25338342..25338471,25341410..25341504, FT 25348951..25349042,25352433..25352544,25353805..25353885, FT 25355982..25356082,25362123..25362297,25363486..25363562, FT 25363836..25363910,25367180..25367484,25370275..25370433, FT 25373533..25373722,25374504..25374672,25376519..25376709, FT 25398334..25398346) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-004" FT /standard_name="OTTHUMP00000178539" FT /product="ring finger protein 17" FT /protein_id="CAI15247.1" FT /translation="MAAEASKTGPSRSSYQRMGRKSQPWGAAEIQCTRCGRRVSRSSGH FT HCELQCGHAFCELCLLMTEECTTIICPDCEVATAVNTRQRYYPMAGYIKEDSIMEKLQP FT KTIKNCSQDFKKTADQLTTGLERSASTDKTLLNSSAVMLDTNTAEEIDEALNTAHHSFE FT QLSIAGKALEHMQKQTIEERERVIEVVEKQFDQLLAFFDSRRKKNLCEEFARTTDDYLS FT NLIKAKSYIEEKKNNLNAAMNIARALQLSPSLRTYCDLNQIIRTLQLTSDSELAQVSSP FT QLRNPPRLSVNCSEIICMFNNMGKIEFRDSTKCYPQENEIRQNVQKKYNNKKELSCYDT FT YPPLEKKKVDMSVLTSEAPPPPLQPETNDVHLEAKNFQPQKDVATASPKTIAVLPQMGS FT SPDVIIEEIIEDNVESSAELVFVSHVIDPCHFYIRKYSQIKDAKVLEKKVNEFCNRSSH FT LDPSDILELGARIFVSSIKNGMWCRGTITELIPIEGRNTRKPCSPTRLFVHEVALIQIF FT MVDFGNSEVLIVTGVVDTHVRPEHSAKQHIALNDLCLVLRKSEPYTEGLLKDIQPLAQP FT CSLKDIVPQNSNEGWEEEAKVEFLKMVNNKAVSMKVFREEDGVLIVDLQKPPPNKISSD FT MPVSLRDALVFMELAKDLI" FT mRNA join(25377872..25378051,25378426..25378567, FT 25399757..25399910,25404622..25404737,25405996..25406116, FT AL354798.13:3801..3921,AL354798.13:5504..5731, FT AL354798.13:6412..6562,AL354798.13:6721..6839, FT AL354798.13:12101..12203,AL354798.13:13216..13331, FT AL354798.13:15615..15904,AL354798.13:20761..20924, FT AL354798.13:23028..23147,AL354798.13:24473..24553, FT AL354798.13:26633..26758,AL354798.13:27904..27963, FT AL354798.13:30360..30476,AL354798.13:32331..32499, FT AL354798.13:35874..>36021) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-001" FT /product="ring finger protein 17" FT /note="match: ESTs: Em:BB014105" FT /note="match: cDNAs: Em:AB071045" FT CDS join(25378505..25378567,25399757..25399910, FT 25404622..25404737,25405996..25406116, FT AL354798.13:3801..3921,AL354798.13:5504..5731, FT AL354798.13:6412..6562,AL354798.13:6721..6839, FT AL354798.13:12101..12203,AL354798.13:13216..13331, FT AL354798.13:15615..15904,AL354798.13:20761..20924, FT AL354798.13:23028..23147,AL354798.13:24473..24553, FT AL354798.13:26633..26758,AL354798.13:27904..27963, FT AL354798.13:30360..30476,AL354798.13:32331..32499, FT AL354798.13:35874..>36021) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-001" FT /standard_name="OTTHUMP00000018139" FT /product="ring finger protein 17" FT /note="match: proteins: Tr:Q95LZ6" FT /protein_id="CAI15249.2" FT /translation="MTDVSVTVCHINSPGDFYLQLIEGLDILFLLKTIEEFYKSEDGEN FT LEILCPVQDQACVAKFEDGIWYRAKVIGLPGHQEVEVKYVDFGNTAKITIKDVRKIKDE FT FLNAPEKAIKCKLAYIEPYKRTMQWSKEAKEKFEEKAQDKFMTCSVIKILEDNVLLVEL FT FDSLGAPEMTTTSINDQLVKEGLASYEIGYILKDNSQKHIEVWDPSPEEIISNEVHNLN FT PVSAKSLPNENFQSLYNKELPVHICNVISPEKIYVQWLLTENLLNSLEEKMIAAYENSK FT WEPVKWENDMHCAVKIQDKNQWRRGQIIRMVTDTLVEVLLYDVGVELVVNVDCLRKLEE FT NLKTMGRLSLECSLVDIRPAGGSDKWTATACDCLSLYLTGAVATIILQVDSEENNTTWP FT LPVKIFCRDEKGERVDVSKYLIKKGLALRERRINNLDNSHSLSEKSLEVPLEQEDSVVT FT NCIKTNFDPDKKTADIISEQKVSEFQEKILEPRTTRGYKPPAIPNMNVFEATVSCVGDD FT GTIFVVPKLSEFELIKMTNEIQSNLKCLGLLEPYFWKKGEACAVRGSDTLWYRGKVMEV FT VGGAVRVQYLDHGFTEKIPQCHLYPILLYPDIPQFCIPCQLHNTTPVGNVWQPDAIEVL FT QQLLSKRQVDIHIMELPKNPWEKLSIHLYFDGMSLSYFMAYYKYCTSEHTEEMLKEKPR FT SDHDKKYEEEQWEIRFEELLSAETDTPLLPPYLSSSLPSPGELYAVQVKHVVSPNEVYI FT CLDSIETSNQSNQHSDTDDSGVSGESESESLDEALQRVNKKVEALPPLTDFRTEMPCLA FT EYDDGLWYRAKIVAIKEFNPLSILVQFVDYGSTAKLTLNRLKI" FT misc_feature 25410379 FT /note="Clone_left_end: RP11-756A22" FT misc_feature 25414379..25577709 FT /note="annotated region of clone" FT misc_feature 25416706..25416779 FT /note="Sequence from overlapping clone bA534K14 (AL391560). FT Assembly confirmed by restriction digest data" FT mRNA join(25418017..25418109,25418790..25418940, FT 25419099..25419217,25424479..25424581,25425594..25425709, FT 25427993..25428282,25433139..25433302,25435406..25435525, FT 25436851..25436931,25440282..25440341,25442738..25442854, FT 25444709..25444877,25448252..25448387,25451135..25451324, FT 25453325..25453433,25453875..25454059) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-002" FT /product="ring finger protein 17" FT /note="match: ESTs: Em:AI650446 Em:AW291016" FT /note="match: cDNAs: Em:AK001907" FT CDS join(25418803..25418940,25419099..25419217, FT 25424479..25424581,25425594..25425709,25427993..25428282, FT 25433139..25433302,25435406..25435525,25436851..25436931, FT 25440282..25440341,25442738..25442854,25444709..25444877, FT 25448252..25448387,25451135..25451324,25453325..25453423) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-002" FT /standard_name="OTTHUMP00000018140" FT /product="ring finger protein 17" FT /note="match: proteins: Sw:Q9NUY9.1" FT /protein_id="CAI16633.1" FT /translation="MIAAYENSKWEPVKWENDMHCAVKIQDKNQWRRGQIIRMVTDTLV FT EVLLYDVGVELVVNVDCLRKLEENLKTMGRLSLECSLVDIRPAGGSDKWTATACDCLSL FT YLTGAVATIILQVDSEENNTTWPLPVKIFCRDEKGERVDVSKYLIKKGLALRERRINNL FT DNSHSLSEKSLEVPLEQEDSVVTNCIKTNFDPDKKTADIISEQKVSEFQEKILEPRTTR FT GYKPPAIPNMNVFEATVSCVGDDGTIFVVPKLSEFELIKMTNEIQSNLKCLGLLEPYFW FT KKGEACAVRGSDTLWYRGKVMEVVGGAVRVQYLDHGFTEKIPQCHLYPILLYPDIPQFC FT IPCQLHNTTPVGNVWQPDAIEVLQQLLSKRQVDIHIMKPRSDHDKKYEEEQWEIRFEEL FT LSAETDTPLLPPYLSSSLPSPGELYAVQVKHVVSPNEVYICLDSIETSNQSNQHSDTDD FT SGVSGESESESLDEALQRVNKKVEALPPLTDFRTEMPCLAEYDDGLWYRAKIVAIKEFN FT PLSILVQFVDYGSTAKLTLNRLCQIPSHLMRYPARAIKVLLAGFKPPLRDLGETRIPYC FT PKWSMEALWAMIDCLQGKQLYAVSMAPAPEQIVTLYDDEQHPVHMPLVEMGLADKDE" FT misc_feature 25432259..25432318 FT /note="Sequence confirmed by AC018739 sequenced by WUGSC" FT polyA_signal 25454040..25454045 FT polyA_site 25454059 FT mRNA join(AL391560.14:44041..44222,AL391560.14:47161..47255, FT AL391560.14:54702..54793,AL391560.14:58184..58295, FT AL391560.14:59556..59636,AL391560.14:61733..61833, FT AL391560.14:67877..68048,AL391560.14:69237..69313, FT AL391560.14:69587..69661,AL391560.14:72931..73235, FT AL391560.14:76026..76184,AL391560.14:79284..79473, FT AL391560.14:80255..80423,AL391560.14:82270..82460, FT AL391560.14:84177..84318,AL391560.14:105508..105661, FT AL391560.14:110373..110488,AL391560.14:111747..111867, FT 25416179..25416299,25417882..25418109,25418790..25418940, FT 25419099..25419217,25424479..25424581,25425594..25425709, FT 25427993..25428282,25433139..25433302,25435406..25435525, FT 25436851..25436931,25439011..25439136,25440282..25440341, FT 25442738..25442854,25444709..25444877,25448252..25448387, FT 25451135..25451324,25453325..25453433,25453875..25454059) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-003" FT /product="ring finger protein 17" FT /note="match: ESTs: Em:AL048865.1 Em:AU136520.1 FT Em:BI459805.1 Em:BU182455.1 Em:BX378977.2 Em:CD358307.1 FT Em:CD557770.1 Em:DB020533.1 Em:DB071896.1 Em:DB075166.1 FT Em:DB081075.1 Em:DB088295.1 Em:DB097489.1" FT /note="match: cDNAs: Em:BC037275.1" FT CDS join(AL391560.14:44093..44222,AL391560.14:47161..47255, FT AL391560.14:54702..54793,AL391560.14:58184..58295, FT AL391560.14:59556..59636,AL391560.14:61733..61833, FT AL391560.14:67877..68048,AL391560.14:69237..69313, FT AL391560.14:69587..69661,AL391560.14:72931..73235, FT AL391560.14:76026..76184,AL391560.14:79284..79473, FT AL391560.14:80255..80423,AL391560.14:82270..82460, FT AL391560.14:84177..84318,AL391560.14:105508..105661, FT AL391560.14:110373..110488,AL391560.14:111747..111867, FT 25416179..25416299,25417882..25418109,25418790..25418940, FT 25419099..25419217,25424479..25424581,25425594..25425709, FT 25427993..25428282,25433139..25433302,25435406..25435525, FT 25436851..25436931,25439011..25439136,25440282..25440341, FT 25442738..25442854,25444709..25444877,25448252..25448387, FT 25451135..25451324,25453325..25453423) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-003" FT /standard_name="OTTHUMP00000018141" FT /product="ring finger protein 17" FT /protein_id="CAM23326.1" FT /translation="MAAEASKTGPSRSSYQRMGRKSQPWGAAEIQCTRCGRRVSRSSGH FT HCELQCGHAFCELCLLMTEECTTIICPDCEVATAVNTRQRYYPMAGYIKEDSIMEKLQP FT KTIKNCSQDFKKTADQLTTGLERSASTDKTLLNSSAVMLDTNTAEEIDEALNTAHHSFE FT QLSIAGKALEHMQKQTIEERERVIEVVEKQFDQLLAFFDSRKKNLCEEFARTTDDYLSN FT LIKAKSYIEEKKNNLNAAMNIARALQLSPSLRTYCDLNQIIRTLQLTSDSELAQVSSPQ FT LRNPPRLSVNCSEIICMFNNMGKIEFRDSTKCYPQENEIRQNVQKKYNNKKELSCYDTY FT PPLEKKKVDMSVLTSEAPPPPLQPETNDVHLEAKNFQPQKDVATASPKTIAVLPQMGSS FT PDVIIEEIIEDNVESSAELVFVSHVIDPCHFYIRKYSQIKDAKVLEKKVNEFCNRSSHL FT DPSDILELGARIFVSSIKNGMWCRGTITELIPIEGRNTRKPCSPTRLFVHEVALIQIFM FT VDFGNSEVLIVTGVVDTHVRPEHSAKQHIALNDLCLVLRKSEPYTEGLLKDIQPLAQPC FT SLKDIVPQNSNEGWEEEAKVEFLKMVNNKAVSMKVFREEDGVLIVDLQKPPPNKISSDM FT PVSLRDALVFMELAKFKSQSLRSHFEKNTTLHYHPPILPKEMTDVSVTVCHINSPGDFY FT LQLIEGLDILFLLKTIEEFYKSEDGENLEILCPVQDQACVAKFEDGIWYRAKVIGLPGH FT QEVEVKYVDFGNTAKITIKDVRKIKDEFLNAPEKAIKCKLAYIEPYKRTMQWSKEAKEK FT FEEKAQDKFMTCSVIKILEDNVLLVELFDSLGAPEMTTTSINDQLVKEGLASYEIGYIL FT KDNSQKHIEVWDPSPEEIISNEVHNLNPVSAKSLPNENFQSLYNKELPVHICNVISPEK FT IYVQWLLTENLLNSLEEKMIAAYENSKWEPVKWENDMHCAVKIQDKNQWRRGQIIRMVT FT DTLVEVLLYDVGVELVVNVDCLRKLEENLKTMGRLSLECSLVDIRPAGGSDKWTATACD FT CLSLYLTGAVATIILQVDSEENNTTWPLPVKIFCRDEKGERVDVSKYLIKKGLALRERR FT INNLDNSHSLSEKSLEVPLEQEDSVVTNCIKTNFDPDKKTADIISEQKVSEFQEKILEP FT RTTRGYKPPAIPNMNVFEATVSCVGDDGTIFVVPKLSEFELIKMTNEIQSNLKCLGLLE FT PYFWKKGEACAVRGSDTLWYRGKVMEVVGGAVRVQYLDHGFTEKIPQCHLYPILLYPDI FT PQFCIPCQLHNTTPVGNVWQPDAIEVLQQLLSKRQVDIHIMELPKNPWEKLSIHLYFDG FT MSLSYFMAYYKYCTSEHTEEMLKEKPRSDHDKKYEEEQWEIRFEELLSAETDTPLLPPY FT LSSSLPSPGELYAVQVKHVVSPNEVYICLDSIETSNQSNQHSDTDDSGVSGESESESLD FT EALQRVNKKVEALPPLTDFRTEMPCLAEYDDGLWYRAKIVAIKEFNPLSILVQFVDYGS FT TAKLTLNRLCQIPSHLMRYPARAIKVLLAGFKPPLRDLGETRIPYCPKWSMEALWAMID FT CLQGKQLYAVSMAPAPEQIVTLYDDEQHPVHMPLVEMGLADKDE" FT polyA_site complement(25457171) FT polyA_signal complement(25457193..25457198) FT mRNA complement(join(25459428..25459524,25459744..25460217)) FT /gene="CENPJ" FT /locus_tag="RP11-756A22.2-003" FT /product="centromere protein J" FT /note="match: ESTs: Em:AI065058" FT misc_feature 25461963..25461976 FT /note="Sequence confirmed by AC018739 sequenced by WUGSC" FT misc_feature 25461980 FT /note="Sequence confirmed by AC018739 sequenced by WUGSC" FT polyA_site complement(25463308) FT polyA_signal complement(25463328..25463333) FT mRNA complement(join(25458468..25458601,25459414..25459524, FT 25459744..25459808,25460373..25460523,25463454..25463493)) FT /gene="CENPJ" FT /locus_tag="RP11-756A22.2-004" FT /product="centromere protein J" FT /note="match: ESTs: Em:AW392342" FT misc_feature 25467051..25467084 FT /note="Sequence confirmed by AC018739 sequenced by WUGSC" FT mRNA complement(join(25463308..25463538,25466781..25467005, FT 25473557..25473722,25478064..>25478132)) FT /gene="CENPJ" FT /locus_tag="RP11-756A22.2-002" FT /product="centromere protein J" FT /note="match: ESTs: Em:AA627098 Em:AI559624" FT /note="match: cDNAs: Em:AF141343" FT CDS complement(join(25463410..25463538,25466781..25467005, FT 25473557..25473722,25478064..>25478132)) FT /codon_start=2 FT /gene="CENPJ" FT /locus_tag="RP11-756A22.2-002" FT /standard_name="OTTHUMP00000018138" FT /product="centromere protein J" FT /note="match: proteins: Tr:Q9C061" FT /protein_id="CAI16634.1" FT /translation="FKAENASLAKLRIERESALEKLRKEIADFEQQKAKELARIEEFKK FT EEMRKLQKERKVFEKYTTAARTFPDKKEREEIQTLKQQIADLREDLKRKETKWSSTHSR FT LRSQIQMLVRENTDLREEIKVMERFRLDAWKRAEAIESSLEVEKKDKLANTSVRFQNSQ FT ISSGTQVEKYKKNYLPMQGKRLHDLFIKHFRM" FT CDS complement(join(25457315..25457507,25458101..25458221, FT 25458299..25458383,25458461..25458601,25459414..25459524, FT 25459744..25459808,25463454..25463538,25466781..25467005, FT 25473557..25473722,25478064..25478196,25479484..25481098, FT 25481229..25481331,25482156..25482264,25483928..25484224, FT 25486084..25486207,25486720..25487163)) FT /gene="CENPJ" FT /locus_tag="RP11-756A22.2-001" FT /standard_name="OTTHUMP00000018137" FT /product="centromere protein J" FT /note="match: proteins: Sw:Q5BQN8.1 Sw:Q9HC77.2 FT Tr:Q2KHM6.1" FT /protein_id="CAI16635.1" FT /translation="MFLMPTSSELNSGQNFLTQWMTNPSRAGVILNRGFPILEADKEKR FT AAVDISTSFPIKGTHFSDSFSFINEEDSLLEEQKLESNNPYKPQSDKSETHTAFPCIKK FT GPQVAACHSAPGHQEENKNDFIPDLASEFKEGAYKDPLFKKLEQLKEVQQKKQEQLKRQ FT QLEQLQRLMEEQEKLLTMVSGQCTLPGLSLLPDDQSQKHRSPGNTTTGERATCCFPSYV FT YPDPTQEETYPSNILSHEQSNFCRTAHGDFVLTSKRASPNLFSEAQYQEAPVEKNNLKE FT ENRNHPTGESILCWEKVTEQIQEANDKNLQKHDDSSEVANIEERPIKAAIGERKQTFED FT YLEEQIQLEEQELKQKQLKEAEGPLPIKAKPKQPFLKRGEGLARFTNAKSKFQKGKESK FT LVTNQSTSEDQPLFKMDRQQLQRKTALKNKELCADNPILKKDSKARTKSGSVTLSQKPK FT MLKCSNRKSLSPSGLKIQTGKKCDGQFRDQIKFENKVTSNNKENVTECPKPCDTGCTGW FT NKTQGKDRLPLSTGPASRLAAKSPIRETMKESESSLDVSLQKKLETWEREKEKENLELD FT EFLFLEQAADEISFSSNSSFVLKILERDQQICKGHRMSSTPVKAVPQKTNPADPISHCN FT RSEDLDHTAREKESECEVAPKQLHSLSSADELREQPCKIRKAVQKSTSENQTEWNARDD FT EGVPNSDSSTDSEEQLDVTIKPSTEDRERGISSREDSPQVCDDKGPFKDTRTQEDKRRD FT VDLDLSDKDYSSDESIMESIKHKVSEPSRSSSLSLSKMDFDDERTWTDLEENLCNHDVV FT LGNESTYGTPQTCYPNNEIGILDKTIKRKIAPVKRGEDLSKSRRSRSPPTSELMMKFFP FT SLKPKPKSDSHLGNELKLNISQDQPPGDNARSQVLREKIIELETEIEKFKAENASLAKL FT RIERESALEKLRKEIADFEQQKAKELARIEEFKKEEMRKLQKERKVFEKYTTAARTFPD FT KKEREEIQTLKQQIADLREDLKRKETKWSSTHSRLRSQIQMLVRENTDLREEIKVMERF FT RLDAWKRAEAIESSLEVEKKDKLANTSVRFQNSQISSGTQVEKYKKNYLPMQGNPPRRS FT KSAPPRDLGNLDKGQAASPREPLEPLNFPDPEYKEEEEDQDIQGEISHPDGKVEKVYKN FT GCRVILFPNGTRKEVSADGKTITVTFFNGDVKQVMPDQRVIYYYAAAQTTHTTYPEGLE FT VLHFSSGQIEKHYPDGRKEITFPDQTVKNLFPDGQEESIFPDGTIVRVQRDGNKLIEFN FT NGQRELHTAQFKRREYPDGTVKTVYANGHQETKYRSGRIRVKDKEGNVLMDTEL" FT mRNA join(AL391560.14:83623..83802,AL391560.14:84177..84318, FT AL391560.14:105508..105661,AL391560.14:110373..110488, FT AL391560.14:111747..111867,25416179..25416299, FT 25417882..25418109,25418790..25418940,25419099..25419217, FT 25424479..25424581,25425594..25425709,25427993..25428282, FT 25433139..25433302,25435406..25435525,25436851..25436931, FT 25439011..25439136,25440282..25440341,25442738..25442854, FT 25444709..25444877,25448252..>25448399) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-001" FT /product="ring finger protein 17" FT /note="match: ESTs: Em:BB014105" FT /note="match: cDNAs: Em:AB071045" FT CDS join(AL391560.14:84256..84318,AL391560.14:105508..105661, FT AL391560.14:110373..110488,AL391560.14:111747..111867, FT 25416179..25416299,25417882..25418109,25418790..25418940, FT 25419099..25419217,25424479..25424581,25425594..25425709, FT 25427993..25428282,25433139..25433302,25435406..25435525, FT 25436851..25436931,25439011..25439136,25440282..25440341, FT 25442738..25442854,25444709..25444877,25448252..>25448399) FT /gene="RNF17" FT /locus_tag="RP11-756A22.1-001" FT /standard_name="OTTHUMP00000018139" FT /product="ring finger protein 17" FT /note="match: proteins: Tr:Q95LZ6" FT /protein_id="CAI16636.2" FT /translation="MTDVSVTVCHINSPGDFYLQLIEGLDILFLLKTIEEFYKSEDGEN FT LEILCPVQDQACVAKFEDGIWYRAKVIGLPGHQEVEVKYVDFGNTAKITIKDVRKIKDE FT FLNAPEKAIKCKLAYIEPYKRTMQWSKEAKEKFEEKAQDKFMTCSVIKILEDNVLLVEL FT FDSLGAPEMTTTSINDQLVKEGLASYEIGYILKDNSQKHIEVWDPSPEEIISNEVHNLN FT PVSAKSLPNENFQSLYNKELPVHICNVISPEKIYVQWLLTENLLNSLEEKMIAAYENSK FT WEPVKWENDMHCAVKIQDKNQWRRGQIIRMVTDTLVEVLLYDVGVELVVNVDCLRKLEE FT NLKTMGRLSLECSLVDIRPAGGSDKWTATACDCLSLYLTGAVATIILQVDSEENNTTWP FT LPVKIFCRDEKGERVDVSKYLIKKGLALRERRINNLDNSHSLSEKSLEVPLEQEDSVVT FT NCIKTNFDPDKKTADIISEQKVSEFQEKILEPRTTRGYKPPAIPNMNVFEATVSCVGDD FT GTIFVVPKLSEFELIKMTNEIQSNLKCLGLLEPYFWKKGEACAVRGSDTLWYRGKVMEV FT VGGAVRVQYLDHGFTEKIPQCHLYPILLYPDIPQFCIPCQLHNTTPVGNVWQPDAIEVL FT QQLLSKRQVDIHIMELPKNPWEKLSIHLYFDGMSLSYFMAYYKYCTSEHTEEMLKEKPR FT SDHDKKYEEEQWEIRFEELLSAETDTPLLPPYLSSSLPSPGELYAVQVKHVVSPNEVYI FT CLDSIETSNQSNQHSDTDDSGVSGESESESLDEALQRVNKKVEALPPLTDFRTEMPCLA FT EYDDGLWYRAKIVAIKEFNPLSILVQFVDYGSTAKLTLNRLKI" FT mRNA complement(join(25457171..25457507,25458101..25458221, FT 25458299..25458383,25458461..25458601,25459414..25459524, FT 25459744..25459808,25463454..25463538,25466781..25467005, FT 25473557..25473722,25478064..25478196,25479484..25481098, FT 25481229..25481331,25482156..25482264,25483928..25484224, FT 25486084..25486207,25486720..25487229,25496899..25497018)) FT /gene="CENPJ" FT /locus_tag="RP11-756A22.2-001" FT /product="centromere protein J" FT /note="match: ESTs: Em:AW386320.1 Em:BE745823.1 FT Em:BG941999.1 Em:BU150232.1 Em:CD643097.1 Em:CN431004.1 FT Em:DA457848.1 Em:DA738267.1 Em:DB062002.1" FT /note="match: cDNAs: Em:AF139625.1 Em:AJ303006.1 FT Em:BC024209.2 Em:BC113110.1" FT mRNA complement(join(25511014..25511908,25512328..25512491)) FT /locus_tag="RP11-756A22.7-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF772543 Em:BG527679" FT /note="match: cDNAs: Em:BC017420" FT CDS join(25517713..25517879,25518514..25518636) FT /pseudo FT /locus_tag="RP11-756A22.4-001" FT /product="pseudogene similar to part of solute carrier FT family 25 (mitochondrial carrier; ornithine transporter) FT member 15 SLC25A15" FT /note="match: proteins: Sw:Q9BXI2 Sw:Q9WVD5 Sw:Q9Y619 FT Tr:Q99ML6" FT misc_feature 25520267..25520432 FT /note="Sequence confirmed by AC018739 sequenced by WUGSC" FT misc_feature 25520467..25520478 FT /note="Sequence confirmed by AC018739 sequenced by WUGSC" FT misc_feature 25530446 FT /note="Clone_left_end: RP11-458I4" FT misc_feature 25538404..25538463 FT /note="Sequence confirmed by AC018739 sequenced by WUGSC" FT mRNA complement(join(25525526..25525628,25527419..25527482, FT 25528911..25529007,25533872..25533950,25535887..25535992, FT 25539638..25539718,25541530..25541592)) FT /locus_tag="RP11-756A22.6-001" FT /product="transmembrane phosphoinositide 3-phosphatase and FT tensin homolog 2 (TPTE2) pseudogene" FT mRNA complement(join(25498815..25499013,25499986..25500032, FT 25507633..25507674,25525535..25525626,25541530..25541591, FT 25542344..25542415)) FT /locus_tag="RP11-756A22.6-002" FT /product="transmembrane phosphoinositide 3-phosphatase and FT tensin homolog 2 (TPTE2) pseudogene" FT /note="match: ESTs: Em:BF062311" FT mRNA complement(join(25514740..25514923,25516125..25516246, FT 25517070..25517159,25525535..25525626,25542344..25542625)) FT /locus_tag="RP11-756A22.6-003" FT /product="transmembrane phosphoinositide 3-phosphatase and FT tensin homolog 2 (TPTE2) pseudogene" FT /note="match: ESTs: Em:BI824022" FT mRNA complement(join(25541380..25541591,25542344..25542593)) FT /locus_tag="RP11-756A22.6-004" FT /product="transmembrane phosphoinositide 3-phosphatase and FT tensin homolog 2 (TPTE2) pseudogene" FT /note="match: ESTs: Em:AL707823" FT CDS complement(25562715..25563063) FT /pseudo FT /locus_tag="RP11-756A22.5-001" FT /product="60S ribisomal protein L34 (RPL34) pseudogene" FT /note="match: proteins: Sw:P11250 Sw:Q29223 Sw:Q90YT5 FT Sw:Q9URT8 Tr:Q8QFW7 Tr:Q8SYG0 Tr:Q8WQI6 Tr:Q9VHE5" FT misc_feature 25579709 FT /note="Clone_right_end: RP11-756A22" FT misc_feature 25603798 FT /note="Clone_left_end: RP11-165I9" FT misc_feature 25605798..25790863 FT /note="annotated region of clone" FT mRNA 25670006..25673392 FT /gene="PABPC3" FT /locus_tag="RP11-165I9.5-001" FT /product="poly(A) binding protein, cytoplasmic 3" FT /note="match: ESTs: Em:BM558071.1 Em:BQ888776.1 FT Em:CX164993.1" FT /note="match: cDNAs: Em:AF132026.1 Em:AL136900.1 FT Em:BC027617.2 Em:BC045608.1" FT CDS 25670337..25672232 FT /gene="PABPC3" FT /locus_tag="RP11-165I9.5-001" FT /standard_name="OTTHUMP00000018142" FT /product="poly(A) binding protein, cytoplasmic 3" FT /note="match: proteins: Sw:Q9H361.2 Tr:Q3ZCS4.1 FT Tr:Q5VX58.1" FT /protein_id="CAH70805.1" FT /translation="MNPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRD FT LITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVK FT NLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLL FT NGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKV FT MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFE FT QMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCF FT SSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPP FT SGYFMTAVPQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFS FT TMRPASSQVPRVMSTQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQ FT HRNAQPQVTMQQLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKI FT TGMLLEIDNSELLYMLESPESLRSKVDEAVAVLQAHQAKEATQKAVNSATGVPTV" FT polyA_site 25672682 FT polyA_signal 25672714..25672719 FT polyA_signal 25673371..25673376 FT polyA_site 25673392 FT misc_feature 25708166 FT /note="Clone_right_end: RP11-458I4" FT CDS <25715674..25716015 FT /codon_start=1 FT /locus_tag="RP11-165I9.3-001" FT /standard_name="OTTHUMP00000018144" FT /product="novel protein" FT /note="match: proteins: Tr:O00247 Tr:O00249" FT /protein_id="CAH70806.1" FT /translation="GLTTPNPQWKQQNSPLNTYFSLPTCSLPVNRTPSPYLPTRQNLNI FT LLDALSSPVHTFSFKPHTEKHRAGVSKCLPGLTAGVVLKLHNFGLIISLRGSPLPCPWG FT RKQDKSTPV" FT mRNA <25715674..25716046 FT /locus_tag="RP11-165I9.3-001" FT /product="novel protein" FT /note="match: cDNAs: Em:U82306 Em:U82311" FT misc_feature 25731239 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 600bp by restriction digest" FT misc_feature 25733814 FT /note="Clone_left_end: RP11-271M24" FT polyA_site complement(25735822) FT polyA_signal complement(25735846..25735851) FT polyA_site complement(25739081) FT polyA_signal complement(25739109..25739114) FT CDS complement(join(25743742..25744619,25744977..25745757)) FT /gene="FAM123A" FT /locus_tag="RP11-165I9.2-001" FT /standard_name="OTTHUMP00000018143" FT /product="family with sequence similarity 123A" FT /note="match: proteins: Tr:Q96NN5.1" FT /protein_id="CAH70807.1" FT /translation="METSRSRGGGGAVSERGGAGASVGVCRRKAEAGAGTGTLAADMDL FT HCDCAAETPAAEPPSGKINKAAFKLFKKRKSGGTMPSIFGVKNKGDGKSSGPTGLVRSR FT THDGLAEVLVLESGRKEEPRGGGDSGGGGGGRPNPGPPRAAGPGGGSLASSSVAKSHSF FT FSLLKKNGRSENGKGEPVDASKAGGKQKRGLRGLFSGMRWHRKDKRAKAEAAEGRAPGG FT GLILPGSLTASLECVKEETPRAAREPEEPSQDAPRDPAGCGDIIADQEEEAGPSCDKHV FT PGPGKPALSKKNPGVVAYQGGGEEMASPDEVDDTYLQEFWDMLSQTEEQGPEPQEGAAK FT VAAALETKVVPETPKDTRCVEAAKDASSVKRRRLNRIPIEPHPKEEPKHPEKEQQEGVP FT NSDEGYWDSTTPGPEEDSSSSGKKAGIPRDSYSGDALYDLYADPDGSPATLPGGKDNEE FT TSSLSRLKPVSPGTITCPLRTPGSLLKDSKIPISIKHLTNLPSSHPVVHQQPSRSEMPR FT TKIPVSKVLVRRVSNRGLAGTTIRATACHDSAKKL" FT mRNA complement(join(25735822..25744619,25744977..25745857, FT 25746051..25746426)) FT /gene="FAM123A" FT /locus_tag="RP11-165I9.2-001" FT /product="family with sequence similarity 123A" FT /note="match: ESTs: Em:AI291362.1 Em:BM564862.1 FT Em:BM723921.1 Em:BP209460.1 Em:BP308702.1 Em:BP346982.1 FT Em:DA210701.1" FT /note="match: cDNAs: Em:AK055049" FT mRNA complement(join(25746966..25747460,25748051..25748225, FT 25750814..25750987,25753915..25754217)) FT /locus_tag="RP11-165I9.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BM666193 Em:BM711212" FT mRNA join(25755579..25755671,25760662..25760837, FT 25763397..25763898) FT /locus_tag="RP11-165I9.8-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BE256198 Em:BE781645" FT mRNA join(25767245..25767351,25784239..25784433) FT /locus_tag="RP11-165I9.6-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG190398" FT CDS 25780187..25780640 FT /pseudo FT /locus_tag="RP11-165I9.7-001" FT /product="60S ribosomal protein L23a (RPL23A) pseudogene" FT /note="match: proteins: Sw:O22644 Sw:P62750 Sw:Q07761 FT Sw:Q8LD46 Sw:Q9AT35 Tr:O97118 Tr:Q90YU4 Tr:Q94CM9 Tr:Q9DFF6 FT Tr:Q9W0A8" FT misc_feature 25788863 FT /note="Clone_right_end: RP11-165I9" FT misc_feature 25790864..25911452 FT /note="annotated region of clone" FT polyA_site complement(25820339) FT polyA_signal complement(25820379..25820384) FT polyA_site complement(25821370) FT polyA_signal complement(25821423..25821429) FT mRNA complement(join(25832759..25832830,25834712..25834825, FT 25835806..25835946)) FT /gene="MTMR6" FT /locus_tag="RP11-271M24.1-002" FT /product="myotubularin related protein 6" FT /note="match: ESTs: Em:BM538374" FT misc_feature 25848030..25848043 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA complement(join(25820339..25823630,25825787..25825913, FT 25825991..25826122,25827902..25828102,25828523..25828572, FT 25831334..25831459,25831874..25831983,25832698..25832830, FT 25835806..25835940,25839957..25840085,25840267..25840424, FT 25841917..25842079,25848209..25848325,25861362..25862147)) FT /gene="MTMR6" FT /locus_tag="RP11-271M24.1-001" FT /product="myotubularin related protein 6" FT /note="match: ESTs: Em:AI222068.1 Em:AW664699.1 FT Em:BU567740.1 Em:BX353169.2 Em:DA458510.1 Em:DA485081.1 FT Em:DB163354.1" FT /note="match: cDNAs: Em:AF072928.1 Em:AL832017.2 FT Em:BC040012.1" FT CDS complement(join(25823370..25823630,25825787..25825913, FT 25825991..25826122,25827902..25828102,25828523..25828572, FT 25831334..25831459,25831874..25831983,25832698..25832830, FT 25835806..25835940,25839957..25840085,25840267..25840424, FT 25841917..25842079,25848209..25848325,25861362..25861385)) FT /gene="MTMR6" FT /locus_tag="RP11-271M24.1-001" FT /standard_name="OTTHUMP00000018145" FT /product="myotubularin related protein 6" FT /note="match: proteins: Sw:Q9Y217.2 Tr:Q5JRG6.1" FT /protein_id="CAI39897.1" FT /translation="MEHIRTTKVEQVKLLDRFSTSNKSLTGTLYLTATHLLFIDSHQKE FT TWILHHHIASVEKLALTTSGCPLVIQCKNFRTVHFIVPRERDCHDIYNSLLQLSKQAKY FT EDLYAFSYNPKQNDSERLQGWQLIDLAEEYKRMGVPNSHWQLSDANRDYKICETYPREL FT YVPRIASKPIIVGSSKFRSKGRFPVLSYYHQDKEAAICRCSQPLSGFSARCLEDEHLLQ FT AISKANPVNRYMYVMDTRPKLNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSL FT QKLLEVNGTKGLSVNDFYSGLESSGWLRHIKAVMDAAIFLAKAITVENASVLVHCSDGW FT DRTSQVCSLGSLLLDSYYRTIKGFMVLIEKDWISFGHKFSERCGQLDGDPKEVSPVFTQ FT FLECVWHLTEQFPQAFEFSEAFLLQIHEHIHSCQFGNFLGNCQKEREELKLKEKTYSLW FT PFLLEDQKKYLNPLYSSESHRFTVLEPNTVSFNFKFWRNMYHQFDRTLHPRQSVFNIIM FT NMNEQNKQLEKDIKDLESKIKQRKNKQTDGILTKELLHSVHPESPNLKTSLCFKEQTLL FT PVNDALRTIEGSSPADNRYSEYAEEFSKSEPAVVSLEYGVARMTC" FT mRNA join(25875662..25876018,25881944..25882086, FT 25883385..25883420,25887021..25887170,25887752..25887889, FT 25889495..25889605,25893464..25893488,25894668..25894733, FT 25895057..25895231,25899127..25899206,25901054..25901172, FT 25901568..25901650,25905495..25905696,25911074..25911172, FT AL646102.4:3322..3417,AL138958.18:2655..5096) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-001" FT /product="nucleoporin like 1" FT /note="match: ESTs: Em:AL701694.1 Em:AU124036.1 FT Em:CX166047.1 Em:DB067003.1" FT /note="match: cDNAs: Em:BC001104.2" FT mRNA join(25875769..25876018,25881944..25882086, FT 25883385..25883420,25887021..25887170,25887752..25887889, FT 25889495..25889605,25893464..25893488,25895057..25895231, FT 25899127..25899206,25901054..25901172,25901568..25901650, FT 25905495..25905696,25911074..25911172, FT AL646102.4:3322..3564) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-002" FT /product="nucleoporin like 1" FT /note="match: cDNAs: Em:AF000900" FT mRNA join(25875769..25876018,25881944..25882086, FT 25883385..25883420,25887021..25887170,25887752..25887889, FT 25889495..25889605,25893464..25893488,25894668..25894733, FT 25895057..25895231,25899127..25899206,25901054..25901172, FT 25901568..25901650,25905495..25910478) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-005" FT /product="nucleoporin like 1" FT /note="match: cDNAs: Em:AB007870" FT mRNA join(25875783..25876018,25881944..25882086, FT 25883385..25883420,25887021..25887170,25887752..25887889, FT 25889495..25889605,25891829..25891961) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-006" FT /product="nucleoporin like 1" FT /note="match: ESTs: Em:BM554335" FT CDS join(25875912..25876018,25881944..25882086, FT 25883385..25883420,25887021..25887170,25887752..25887889, FT 25889495..25889605,25893464..25893488,25894668..25894733, FT 25895057..25895231,25899127..25899206,25901054..25901172, FT 25901568..25901650,25905495..25905696,25911074..25911172, FT AL646102.4:3322..3417,AL138958.18:2655..2824) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-001" FT /standard_name="OTTHUMP00000018146" FT /product="nucleoporin like 1" FT /note="match: proteins: Sw:Q9BVL2.1 Tr:Q5VSY4.1" FT /protein_id="CAI39898.1" FT /translation="MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSVGLNFG FT NLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPATTSAA FT TTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTATTT FT TASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGIDFS FT SSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAML FT KVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA FT APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVAL FT AAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTM FT PNAAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSS FT GFGCSTTGASTFGFGTTNKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASA FT GFGTGGQLLQLKKPPAGNKRGKR" FT CDS join(25875912..25876018,25881944..25882086, FT 25883385..25883420,25887021..25887170,25887752..25887889, FT 25889495..25889605,25893464..25893488,25894668..25894733, FT 25895057..25895231,25899127..25899206,25901054..25901172, FT 25901568..25901650,25905495..25905719) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-005" FT /standard_name="OTTHUMP00000018149" FT /product="nucleoporin like 1" FT /note="match: proteins: Tr:Q5JRG2.1" FT /protein_id="CAI39901.1" FT /translation="MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSVGLNFG FT NLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPATTSAA FT TTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTATTT FT TASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGIDFS FT SSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAML FT KVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA FT APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVAL FT AAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTM FT PNAAAVAMAATLTQQQQPATGLNAFKL" FT CDS join(<25881960..25882086,25887021..25887170, FT 25887752..25887889,25889495..25889605,25893464..25893488, FT 25894668..25894733,25895057..25895231,25899127..25899206, FT 25901054..25901172,25901568..25901650,25905495..25905696, FT 25910351..25910466) FT /codon_start=1 FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-004" FT /standard_name="OTTHUMP00000018148" FT /product="nucleoporin like 1" FT /protein_id="CAI39902.1" FT /translation="LNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGTP FT ATTSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGG FT TTATTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGL FT GGIDFSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRM FT SSKAMLKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPG FT LQHEYAAPADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIY FT QTFVALAAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGP FT TPFSTMPNAAAVAMAATLTQQQQPATGDKWCNVAELKNRTQLSLFVNKLELSCYCVIDL FT LYNEQ" FT mRNA join(<25881960..25882086,25887021..25887170, FT 25887752..25887889,25889495..25889605,25893464..25893488, FT 25894668..25894733,25895057..25895231,25899127..25899206, FT 25901054..25901172,25901568..25901650,25905495..25905696, FT 25910351..25910482) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-004" FT /product="nucleoporin like 1" FT /note="match: cDNAs: Em:AF000901" FT mRNA join(25905571..25905696,25911074..25911172, FT AL646102.4:3322..3417,AL138958.18:12252..12490) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-003" FT /product="nucleoporin like 1" FT /note="match: ESTs: Em:AA781861 Em:AI269727 Em:AW241822 FT Em:BF319694" FT misc_feature 25909452 FT /note="Clone_right_end: RP11-271M24" FT misc_feature 25911453..25913446 FT /note="annotated region of clone" FT mRNA join(AL590787.24:86799..87155,AL590787.24:93081..93223, FT AL590787.24:94522..94557,AL590787.24:98158..98307, FT AL590787.24:98889..99026,AL590787.24:100632..100742, FT AL590787.24:104601..104625,AL590787.24:105805..105870, FT AL590787.24:106194..106368,AL590787.24:110264..110343, FT AL590787.24:112191..112309,AL590787.24:112705..112787, FT AL590787.24:116632..116833,AL590787.24:122211..122309, FT 25912774..25912869,AL138958.18:2655..5096) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-001" FT /product="nucleoporin like 1" FT /note="match: cDNAs: Em:BC001104.2" FT /note="match: ESTs: Em:AL701694.1 Em:AU124036.1 FT Em:CX166047.1 Em:DB067003.1" FT mRNA join(AL590787.24:86906..87155,AL590787.24:93081..93223, FT AL590787.24:94522..94557,AL590787.24:98158..98307, FT AL590787.24:98889..99026,AL590787.24:100632..100742, FT AL590787.24:104601..104625,AL590787.24:106194..106368, FT AL590787.24:110264..110343,AL590787.24:112191..112309, FT AL590787.24:112705..112787,AL590787.24:116632..116833, FT AL590787.24:122211..122309,25912774..25913016) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-002" FT /product="nucleoporin like 1" FT /note="match: cDNAs: Em:AF000900" FT CDS join(AL590787.24:87049..87155,AL590787.24:93081..93223, FT AL590787.24:94522..94557,AL590787.24:98158..98307, FT AL590787.24:98889..99026,AL590787.24:100632..100742, FT AL590787.24:104601..104625,AL590787.24:105805..105870, FT AL590787.24:106194..106368,AL590787.24:110264..110343, FT AL590787.24:112191..112309,AL590787.24:112705..112787, FT AL590787.24:116632..116833,AL590787.24:122211..122309, FT 25912774..25912869,AL138958.18:2655..2824) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-001" FT /standard_name="OTTHUMP00000018146" FT /product="nucleoporin like 1" FT /note="match: proteins: Sw:Q9BVL2.1 Tr:Q5VSY4.1" FT /protein_id="CAH72184.1" FT /translation="MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSVGLNFG FT NLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPATTSAA FT TTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTATTT FT TASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGIDFS FT SSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAML FT KVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA FT APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVAL FT AAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTM FT PNAAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSS FT GFGCSTTGASTFGFGTTNKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASA FT GFGTGGQLLQLKKPPAGNKRGKR" FT mRNA join(AL590787.24:116708..116833,AL590787.24:122211..122309, FT 25912774..25912869,AL138958.18:12252..12490) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-003" FT /product="nucleoporin like 1" FT /note="match: ESTs: Em:AA781861 Em:AI269727 Em:AW241822 FT Em:BF319694" FT misc_feature 25913447..26074421 FT /note="annotated region of clone" FT polyA_signal 25916526..25916531 FT polyA_site 25916554 FT CDS complement(25939937..25940293) FT /pseudo FT /locus_tag="RP11-206I15.2-001" FT /product="transcription elongation factor B (SIII), FT polypeptide 2 (18kD, elongin B) (TCEB2) (LOC246717) FT pseudogene" FT /note="match: proteins: Sw:P62870 Sw:Q15370 Tr:O44226 FT Tr:Q9D7T5" FT misc_feature 25942756..25942821 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 25982400 FT /note="Clone_left_end: RP11-172I24" FT mRNA join(AL590787.24:86799..87155,AL590787.24:93081..93223, FT AL590787.24:94522..94557,AL590787.24:98158..98307, FT AL590787.24:98889..99026,AL590787.24:100632..100742, FT AL590787.24:104601..104625,AL590787.24:105805..105870, FT AL590787.24:106194..106368,AL590787.24:110264..110343, FT AL590787.24:112191..112309,AL590787.24:112705..112787, FT AL590787.24:116632..116833,AL590787.24:122211..122309, FT AL646102.4:3322..3417,25914103..25916544) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-001" FT /product="nucleoporin like 1" FT /note="match: cDNAs: Em:BC001104.2" FT /note="match: ESTs: Em:AL701694.1 Em:AU124036.1 FT Em:CX166047.1 Em:DB067003.1" FT CDS join(AL590787.24:87049..87155,AL590787.24:93081..93223, FT AL590787.24:94522..94557,AL590787.24:98158..98307, FT AL590787.24:98889..99026,AL590787.24:100632..100742, FT AL590787.24:104601..104625,AL590787.24:105805..105870, FT AL590787.24:106194..106368,AL590787.24:110264..110343, FT AL590787.24:112191..112309,AL590787.24:112705..112787, FT AL590787.24:116632..116833,AL590787.24:122211..122309, FT AL646102.4:3322..3417,25914103..25914272) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-001" FT /standard_name="OTTHUMP00000018146" FT /product="nucleoporin like 1" FT /note="match: proteins: Sw:Q9BVL2.1 Tr:Q5VSY4.1" FT /protein_id="CAH71290.1" FT /translation="MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSVGLNFG FT NLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPATTSAA FT TTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTATTT FT TASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGIDFS FT SSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAML FT KVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA FT APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVAL FT AAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTM FT PNAAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSS FT GFGCSTTGASTFGFGTTNKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASA FT GFGTGGQLLQLKKPPAGNKRGKR" FT mRNA join(AL590787.24:116708..116833,AL590787.24:122211..122309, FT AL646102.4:3322..3417,25923700..25923938) FT /gene="NUPL1" FT /locus_tag="RP11-206I15.1-003" FT /product="nucleoporin like 1" FT /note="match: ESTs: Em:AA781861 Em:AI269727 Em:AW241822 FT Em:BF319694" FT mRNA join(26042960..26043259,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:37806..37879, FT AL356316.18:40137..40206,AL356316.18:41737..41864, FT AL356316.18:43109..43220,AL356316.18:51156..51321, FT AL356316.18:53611..53738,AL356316.18:54809..54886, FT AL356316.18:58791..58879,AL356316.18:59539..59583, FT AL356316.18:63774..63849,AL356316.18:70585..70690, FT AL356316.18:71428..71510,AL669971.2:2524..2573, FT AL669971.2:4785..4854,AL669971.2:6531..6615, FT AL669971.2:7524..7663,AL669971.2:9535..9673, FT AL669971.2:17351..17415, FT complement(AL136438.10:129336..129508), FT complement(AL136438.10:59452..59635), FT complement(AL136438.10:53722..53832), FT complement(AL136438.10:489..563),AL157366.12:10483..10605, FT AL157366.12:12866..12944,AL157366.12:33515..33576, FT AL157366.12:34124..34180,AL157366.12:35621..35728, FT complement(AL138815.6:60661..60749), FT complement(AL138815.6:53645..53749), FT complement(AL138815.6:9702..9793), FT complement(AL138815.6:1..2436),AL139004.11:101..3628) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: cDNAs: Em:AF156550.1 Em:AF236871.1 FT Em:AK022096 Em:AK094653.1 Em:AL137256.1 Em:AL390129.1" FT /note="match: ESTs: Em:AA106235 Em:AA442068 Em:AA442172 FT Em:AA446696.1 Em:AA460901 Em:AA621544 Em:AA626648.1 FT Em:AA670338 Em:AA670338.1 Em:AA928117.1 Em:AA934530 FT Em:AA937776.1 Em:AA939001 Em:AI039719 Em:AI290906 FT Em:AI298738 Em:AI301142 Em:AI339371 Em:AI348287 Em:AI376848 FT Em:AI390175.1 Em:AI415030.1 Em:AI457291 Em:AI681185 FT Em:AI694347.1 Em:AI697881 Em:AI702177 Em:AI702879 FT Em:AI871240 Em:AI871743.1 Em:AI873068.1 Em:AI912550 FT Em:AI989494.1 Em:AU121019 Em:AU146927 Em:AV663379.1 FT Em:AV728759 Em:AV753946 Em:AW117250.1 Em:AW117557.1 FT Em:AW135797.1 Em:AW138652 Em:AW204173.1 Em:AW241470.1 FT Em:AW294226 Em:AW341405 Em:AW493861.1 Em:BB625106 FT Em:BB655948.1 Em:BE042974 Em:BE045613.1 Em:BE106535.1 FT Em:BE502898 Em:BE504186 Em:BE504251 Em:BE550833 FT Em:BE550844.1 Em:BE551070 Em:BE551091 Em:BE670616 FT Em:BE671275 Em:BE673741.1 Em:BE864200.1 Em:BE954159.1 FT Em:BF110233 Em:BF224080 Em:BF376997.1 Em:BF377003.1 FT Em:BF433170 Em:BF441770.1 Em:BF441771.1 Em:BF444551.1 FT Em:BF460636 Em:BF469189.1 Em:BF567811 Em:BF567892 FT Em:BF888097.1 Em:BF959693.1 Em:BG055319 Em:BG999387 FT Em:BI392650.1 Em:BI395409 Em:BM541208.1 Em:BM661934 FT Em:BM670763 Em:BM673901.1 Em:BM677716 Em:BM681009 FT Em:BM687871 Em:BM698672 Em:BM701669 Em:BM717038.1 FT Em:BM725997 Em:BM938097.1 Em:BM947495.1 Em:BQ042153 FT Em:BQ339609 Em:BQ570706.1 Em:H09155 Em:H09212 Em:H46725 FT Em:H46798 Em:W25905.1 Em:Z45816" FT mRNA join(26043115..26043259,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:33999..34043) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-003" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: cDNAs: Em:AK016508.1" FT CDS join(26043159..26043259,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:37806..37879, FT AL356316.18:40137..40206,AL356316.18:41737..41864, FT AL356316.18:43109..43220,AL356316.18:51156..51321, FT AL356316.18:53611..53738,AL356316.18:54809..54886, FT AL356316.18:58791..58879,AL356316.18:59539..59583, FT AL356316.18:63774..63849,AL356316.18:70585..70690, FT AL356316.18:71428..71510,AL669971.2:2524..2573, FT AL669971.2:4785..4854,AL669971.2:6531..6615, FT AL669971.2:7524..7663,AL669971.2:9535..9673, FT AL669971.2:17351..17415, FT complement(AL136438.10:129336..129508), FT complement(AL136438.10:59452..59635), FT complement(AL136438.10:53722..53832), FT complement(AL136438.10:489..563),AL157366.12:10483..10605, FT AL157366.12:12866..12944,AL157366.12:33515..33576, FT AL157366.12:34124..34180,AL157366.12:35621..35728, FT complement(AL138815.6:60661..60749), FT complement(AL138815.6:53645..53749), FT complement(AL138815.6:9702..9793), FT complement(AL138815.6:2339..2436)) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /standard_name="OTTHUMP00000018151" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: proteins: Sw:P70704 Sw:P98200 Sw:Q29449 FT Sw:Q9NTI2 Sw:Q9NTI2 Sw:Q9Y2Q0 Tr:O94296 Tr:Q8T0I4 Tr:Q9D4I4 FT Tr:Q9V6P5" FT /protein_id="CAH71291.1" FT /translation="MSRATSVGDQLEAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLP FT RFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHK FT ADNAVNKKKTIVLRNGMWHTIMWKEVAVGDIVKVVNGQYLPADVVLLSSSEPQAMCYVE FT TANLDGETNLKIRQGLSHTADMQTREVLMKLSGTIECEGPNRHLYDFTGNLNLDGKSLV FT ALGPDQILLRGTQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLF FT GILLVMALVSSAGALYWNRSHGEKNWYIKKMDTTSDNFGYNLLTFIILYNNLIPISLLV FT TLEVVKYTQALFINWDTDMYYIGNDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMN FT FKKCSIAGVTYGHFPELAREPSSDDFCRMPPPCSDSCDFDDPRLLKNIEDRHPTAPCIQ FT EFLTLLAVCHTVVPEKDGDNIIYQASSPDEAALVKGAKKLGFVFTARTPFSVIIEAMGQ FT EQTFGILNVLEFSSDRKRMSVIVRTPSGRLRLYCKGADNVIFERLSKDSKYMEETLCHL FT EYFATEGLRTLCVAYADLSENEYEEWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLG FT ATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALILLKED FT SLDATRAAITQHCTDLGNLLGKENDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVIC FT CRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDY FT AIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERW FT CIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYKITQNGEGFNTKVFWGHCINALV FT HSLILFWFPMKALEHDTVLTSGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHL FT AVWGSMLTWLVFFGIYSTIWPTIPIAPDMRGQATMVLSSAHFWLGLFLVPTACLIEDVA FT WRAAKHTCKKTLLEEVQELETKSRVLGKAVLRDSNGKRLNERDRLIKRLGRKTPPTLFR FT GSSLQQGVPHGYAFSQEEHGAVSQEEVIRAYDTTKKKSRKK" FT CDS join(26043159..26043259,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:33999..34037) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-003" FT /standard_name="OTTHUMP00000018152" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /protein_id="CAH71292.1" FT /translation="MSRATSVGDQLEAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLP FT RFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHK FT ADNAVNKKKTIVLRNGMWHTIMWKEENSPPFKEISPL" FT misc_feature 26072423 FT /note="Clone_right_end: RP11-206I15" FT misc_feature 26074422..26148422 FT /note="annotated region of clone" FT misc_feature 26081293..26081348 FT /note="sequence from uni-directional dGTP big dye FT terminator read only" FT misc_feature 26081293..26081575 FT /note="Single clone region. Sequence from clone pcr only" FT misc_feature 26148321 FT /note="Clone_right_end: RP11-172I24" FT mRNA join(AL138958.18:131512..131811,26104137..26104236, FT 26104700..26104798,26106410..26106455,26107411..26107451, FT 26112126..26112199,26114457..26114526,26116057..26116184, FT 26117429..26117540,26125476..26125641,26127931..26128058, FT 26129129..26129206,26133111..26133199,26133859..26133903, FT 26138094..26138169,26144905..26145010,26145748..26145830, FT AL669971.2:2524..2573,AL669971.2:4785..4854, FT AL669971.2:6531..6615,AL669971.2:7524..7663, FT AL669971.2:9535..9673,AL669971.2:17351..17415, FT complement(AL136438.10:129336..129508), FT complement(AL136438.10:59452..59635), FT complement(AL136438.10:53722..53832), FT complement(AL136438.10:489..563),AL157366.12:10483..10605, FT AL157366.12:12866..12944,AL157366.12:33515..33576, FT AL157366.12:34124..34180,AL157366.12:35621..35728, FT complement(AL138815.6:60661..60749), FT complement(AL138815.6:53645..53749), FT complement(AL138815.6:9702..9793), FT complement(AL138815.6:1..2436),AL139004.11:101..3628) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: cDNAs: Em:AF156550.1 Em:AF236871.1 FT Em:AK022096 Em:AK094653.1 Em:AL137256.1 Em:AL390129.1" FT /note="match: ESTs: Em:AA106235 Em:AA442068 Em:AA442172 FT Em:AA446696.1 Em:AA460901 Em:AA621544 Em:AA626648.1 FT Em:AA670338 Em:AA670338.1 Em:AA928117.1 Em:AA934530 FT Em:AA937776.1 Em:AA939001 Em:AI039719 Em:AI290906 FT Em:AI298738 Em:AI301142 Em:AI339371 Em:AI348287 Em:AI376848 FT Em:AI390175.1 Em:AI415030.1 Em:AI457291 Em:AI681185 FT Em:AI694347.1 Em:AI697881 Em:AI702177 Em:AI702879 FT Em:AI871240 Em:AI871743.1 Em:AI873068.1 Em:AI912550 FT Em:AI989494.1 Em:AU121019 Em:AU146927 Em:AV663379.1 FT Em:AV728759 Em:AV753946 Em:AW117250.1 Em:AW117557.1 FT Em:AW135797.1 Em:AW138652 Em:AW204173.1 Em:AW241470.1 FT Em:AW294226 Em:AW341405 Em:AW493861.1 Em:BB625106 FT Em:BB655948.1 Em:BE042974 Em:BE045613.1 Em:BE106535.1 FT Em:BE502898 Em:BE504186 Em:BE504251 Em:BE550833 FT Em:BE550844.1 Em:BE551070 Em:BE551091 Em:BE670616 FT Em:BE671275 Em:BE673741.1 Em:BE864200.1 Em:BE954159.1 FT Em:BF110233 Em:BF224080 Em:BF376997.1 Em:BF377003.1 FT Em:BF433170 Em:BF441770.1 Em:BF441771.1 Em:BF444551.1 FT Em:BF460636 Em:BF469189.1 Em:BF567811 Em:BF567892 FT Em:BF888097.1 Em:BF959693.1 Em:BG055319 Em:BG999387 FT Em:BI392650.1 Em:BI395409 Em:BM541208.1 Em:BM661934 FT Em:BM670763 Em:BM673901.1 Em:BM677716 Em:BM681009 FT Em:BM687871 Em:BM698672 Em:BM701669 Em:BM717038.1 FT Em:BM725997 Em:BM938097.1 Em:BM947495.1 Em:BQ042153 FT Em:BQ339609 Em:BQ570706.1 Em:H09155 Em:H09212 Em:H46725 FT Em:H46798 Em:W25905.1 Em:Z45816" FT mRNA join(AL138958.18:131667..131811,26104137..26104236, FT 26104700..26104798,26106410..26106455,26107411..26107451, FT 26108319..26108363) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-003" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: cDNAs: Em:AK016508.1" FT CDS join(AL138958.18:131711..131811,26104137..26104236, FT 26104700..26104798,26106410..26106455,26107411..26107451, FT 26112126..26112199,26114457..26114526,26116057..26116184, FT 26117429..26117540,26125476..26125641,26127931..26128058, FT 26129129..26129206,26133111..26133199,26133859..26133903, FT 26138094..26138169,26144905..26145010,26145748..26145830, FT AL669971.2:2524..2573,AL669971.2:4785..4854, FT AL669971.2:6531..6615,AL669971.2:7524..7663, FT AL669971.2:9535..9673,AL669971.2:17351..17415, FT complement(AL136438.10:129336..129508), FT complement(AL136438.10:59452..59635), FT complement(AL136438.10:53722..53832), FT complement(AL136438.10:489..563),AL157366.12:10483..10605, FT AL157366.12:12866..12944,AL157366.12:33515..33576, FT AL157366.12:34124..34180,AL157366.12:35621..35728, FT complement(AL138815.6:60661..60749), FT complement(AL138815.6:53645..53749), FT complement(AL138815.6:9702..9793), FT complement(AL138815.6:2339..2436)) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /standard_name="OTTHUMP00000018151" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: proteins: Sw:P70704 Sw:P98200 Sw:Q29449 FT Sw:Q9NTI2 Sw:Q9NTI2 Sw:Q9Y2Q0 Tr:O94296 Tr:Q8T0I4 Tr:Q9D4I4 FT Tr:Q9V6P5" FT /protein_id="CAH70876.1" FT /translation="MSRATSVGDQLEAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLP FT RFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHK FT ADNAVNKKKTIVLRNGMWHTIMWKEVAVGDIVKVVNGQYLPADVVLLSSSEPQAMCYVE FT TANLDGETNLKIRQGLSHTADMQTREVLMKLSGTIECEGPNRHLYDFTGNLNLDGKSLV FT ALGPDQILLRGTQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLF FT GILLVMALVSSAGALYWNRSHGEKNWYIKKMDTTSDNFGYNLLTFIILYNNLIPISLLV FT TLEVVKYTQALFINWDTDMYYIGNDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMN FT FKKCSIAGVTYGHFPELAREPSSDDFCRMPPPCSDSCDFDDPRLLKNIEDRHPTAPCIQ FT EFLTLLAVCHTVVPEKDGDNIIYQASSPDEAALVKGAKKLGFVFTARTPFSVIIEAMGQ FT EQTFGILNVLEFSSDRKRMSVIVRTPSGRLRLYCKGADNVIFERLSKDSKYMEETLCHL FT EYFATEGLRTLCVAYADLSENEYEEWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLG FT ATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALILLKED FT SLDATRAAITQHCTDLGNLLGKENDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVIC FT CRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDY FT AIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERW FT CIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYKITQNGEGFNTKVFWGHCINALV FT HSLILFWFPMKALEHDTVLTSGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHL FT AVWGSMLTWLVFFGIYSTIWPTIPIAPDMRGQATMVLSSAHFWLGLFLVPTACLIEDVA FT WRAAKHTCKKTLLEEVQELETKSRVLGKAVLRDSNGKRLNERDRLIKRLGRKTPPTLFR FT GSSLQQGVPHGYAFSQEEHGAVSQEEVIRAYDTTKKKSRKK" FT CDS join(AL138958.18:131711..131811,26104137..26104236, FT 26104700..26104798,26106410..26106455,26107411..26107451, FT 26108319..26108357) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-003" FT /standard_name="OTTHUMP00000018152" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /protein_id="CAH70877.1" FT /translation="MSRATSVGDQLEAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLP FT RFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHK FT ADNAVNKKKTIVLRNGMWHTIMWKEENSPPFKEISPL" FT misc_feature 26148423..26226499 FT /note="annotated region of clone" FT misc_feature 26222500 FT /note="Clone_left_end: RP11-111G7" FT mRNA join(AL138958.18:131512..131811,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:37806..37879, FT AL356316.18:40137..40206,AL356316.18:41737..41864, FT AL356316.18:43109..43220,AL356316.18:51156..51321, FT AL356316.18:53611..53738,AL356316.18:54809..54886, FT AL356316.18:58791..58879,AL356316.18:59539..59583, FT AL356316.18:63774..63849,AL356316.18:70585..70690, FT AL356316.18:71428..71510,26148946..26148995, FT 26151207..26151276,26152953..26153037,26153946..26154085, FT 26155957..26156095,26163773..26163837, FT complement(AL136438.10:129336..129508), FT complement(AL136438.10:59452..59635), FT complement(AL136438.10:53722..53832), FT complement(AL136438.10:489..563),AL157366.12:10483..10605, FT AL157366.12:12866..12944,AL157366.12:33515..33576, FT AL157366.12:34124..34180,AL157366.12:35621..35728, FT complement(AL138815.6:60661..60749), FT complement(AL138815.6:53645..53749), FT complement(AL138815.6:9702..9793), FT complement(AL138815.6:1..2436),AL139004.11:101..3628) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: cDNAs: Em:AF156550.1 Em:AF236871.1 FT Em:AK022096 Em:AK094653.1 Em:AL137256.1 Em:AL390129.1" FT /note="match: ESTs: Em:AA106235 Em:AA442068 Em:AA442172 FT Em:AA446696.1 Em:AA460901 Em:AA621544 Em:AA626648.1 FT Em:AA670338 Em:AA670338.1 Em:AA928117.1 Em:AA934530 FT Em:AA937776.1 Em:AA939001 Em:AI039719 Em:AI290906 FT Em:AI298738 Em:AI301142 Em:AI339371 Em:AI348287 Em:AI376848 FT Em:AI390175.1 Em:AI415030.1 Em:AI457291 Em:AI681185 FT Em:AI694347.1 Em:AI697881 Em:AI702177 Em:AI702879 FT Em:AI871240 Em:AI871743.1 Em:AI873068.1 Em:AI912550 FT Em:AI989494.1 Em:AU121019 Em:AU146927 Em:AV663379.1 FT Em:AV728759 Em:AV753946 Em:AW117250.1 Em:AW117557.1 FT Em:AW135797.1 Em:AW138652 Em:AW204173.1 Em:AW241470.1 FT Em:AW294226 Em:AW341405 Em:AW493861.1 Em:BB625106 FT Em:BB655948.1 Em:BE042974 Em:BE045613.1 Em:BE106535.1 FT Em:BE502898 Em:BE504186 Em:BE504251 Em:BE550833 FT Em:BE550844.1 Em:BE551070 Em:BE551091 Em:BE670616 FT Em:BE671275 Em:BE673741.1 Em:BE864200.1 Em:BE954159.1 FT Em:BF110233 Em:BF224080 Em:BF376997.1 Em:BF377003.1 FT Em:BF433170 Em:BF441770.1 Em:BF441771.1 Em:BF444551.1 FT Em:BF460636 Em:BF469189.1 Em:BF567811 Em:BF567892 FT Em:BF888097.1 Em:BF959693.1 Em:BG055319 Em:BG999387 FT Em:BI392650.1 Em:BI395409 Em:BM541208.1 Em:BM661934 FT Em:BM670763 Em:BM673901.1 Em:BM677716 Em:BM681009 FT Em:BM687871 Em:BM698672 Em:BM701669 Em:BM717038.1 FT Em:BM725997 Em:BM938097.1 Em:BM947495.1 Em:BQ042153 FT Em:BQ339609 Em:BQ570706.1 Em:H09155 Em:H09212 Em:H46725 FT Em:H46798 Em:W25905.1 Em:Z45816" FT CDS join(AL138958.18:131711..131811,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:37806..37879, FT AL356316.18:40137..40206,AL356316.18:41737..41864, FT AL356316.18:43109..43220,AL356316.18:51156..51321, FT AL356316.18:53611..53738,AL356316.18:54809..54886, FT AL356316.18:58791..58879,AL356316.18:59539..59583, FT AL356316.18:63774..63849,AL356316.18:70585..70690, FT AL356316.18:71428..71510,26148946..26148995, FT 26151207..26151276,26152953..26153037,26153946..26154085, FT 26155957..26156095,26163773..26163837, FT complement(AL136438.10:129336..129508), FT complement(AL136438.10:59452..59635), FT complement(AL136438.10:53722..53832), FT complement(AL136438.10:489..563),AL157366.12:10483..10605, FT AL157366.12:12866..12944,AL157366.12:33515..33576, FT AL157366.12:34124..34180,AL157366.12:35621..35728, FT complement(AL138815.6:60661..60749), FT complement(AL138815.6:53645..53749), FT complement(AL138815.6:9702..9793), FT complement(AL138815.6:2339..2436)) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /standard_name="OTTHUMP00000018151" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: proteins: Sw:P70704 Sw:P98200 Sw:Q29449 FT Sw:Q9NTI2 Sw:Q9NTI2 Sw:Q9Y2Q0 Tr:O94296 Tr:Q8T0I4 Tr:Q9D4I4 FT Tr:Q9V6P5" FT /protein_id="CAH73647.1" FT /translation="MSRATSVGDQLEAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLP FT RFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHK FT ADNAVNKKKTIVLRNGMWHTIMWKEVAVGDIVKVVNGQYLPADVVLLSSSEPQAMCYVE FT TANLDGETNLKIRQGLSHTADMQTREVLMKLSGTIECEGPNRHLYDFTGNLNLDGKSLV FT ALGPDQILLRGTQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLF FT GILLVMALVSSAGALYWNRSHGEKNWYIKKMDTTSDNFGYNLLTFIILYNNLIPISLLV FT TLEVVKYTQALFINWDTDMYYIGNDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMN FT FKKCSIAGVTYGHFPELAREPSSDDFCRMPPPCSDSCDFDDPRLLKNIEDRHPTAPCIQ FT EFLTLLAVCHTVVPEKDGDNIIYQASSPDEAALVKGAKKLGFVFTARTPFSVIIEAMGQ FT EQTFGILNVLEFSSDRKRMSVIVRTPSGRLRLYCKGADNVIFERLSKDSKYMEETLCHL FT EYFATEGLRTLCVAYADLSENEYEEWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLG FT ATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALILLKED FT SLDATRAAITQHCTDLGNLLGKENDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVIC FT CRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDY FT AIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERW FT CIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYKITQNGEGFNTKVFWGHCINALV FT HSLILFWFPMKALEHDTVLTSGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHL FT AVWGSMLTWLVFFGIYSTIWPTIPIAPDMRGQATMVLSSAHFWLGLFLVPTACLIEDVA FT WRAAKHTCKKTLLEEVQELETKSRVLGKAVLRDSNGKRLNERDRLIKRLGRKTPPTLFR FT GSSLQQGVPHGYAFSQEEHGAVSQEEVIRAYDTTKKKSRKK" FT misc_feature complement(26226500..26402818) FT /note="annotated region of clone" FT mRNA join(AL138958.18:131512..131811,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:37806..37879, FT AL356316.18:40137..40206,AL356316.18:41737..41864, FT AL356316.18:43109..43220,AL356316.18:51156..51321, FT AL356316.18:53611..53738,AL356316.18:54809..54886, FT AL356316.18:58791..58879,AL356316.18:59539..59583, FT AL356316.18:63774..63849,AL356316.18:70585..70690, FT AL356316.18:71428..71510,AL669971.2:2524..2573, FT AL669971.2:4785..4854,AL669971.2:6531..6615, FT AL669971.2:7524..7663,AL669971.2:9535..9673, FT AL669971.2:17351..17415,26273311..26273483, FT 26343184..26343367,26348987..26349097,26402256..26402330, FT AL157366.12:10483..10605,AL157366.12:12866..12944, FT AL157366.12:33515..33576,AL157366.12:34124..34180, FT AL157366.12:35621..35728, FT complement(AL138815.6:60661..60749), FT complement(AL138815.6:53645..53749), FT complement(AL138815.6:9702..9793), FT complement(AL138815.6:1..2436),AL139004.11:101..3628) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: cDNAs: Em:AF156550.1 Em:AF236871.1 FT Em:AK022096 Em:AK094653.1 Em:AL137256.1 Em:AL390129.1" FT /note="match: ESTs: Em:AA106235 Em:AA442068 Em:AA442172 FT Em:AA446696.1 Em:AA460901 Em:AA621544 Em:AA626648.1 FT Em:AA670338 Em:AA670338.1 Em:AA928117.1 Em:AA934530 FT Em:AA937776.1 Em:AA939001 Em:AI039719 Em:AI290906 FT Em:AI298738 Em:AI301142 Em:AI339371 Em:AI348287 Em:AI376848 FT Em:AI390175.1 Em:AI415030.1 Em:AI457291 Em:AI681185 FT Em:AI694347.1 Em:AI697881 Em:AI702177 Em:AI702879 FT Em:AI871240 Em:AI871743.1 Em:AI873068.1 Em:AI912550 FT Em:AI989494.1 Em:AU121019 Em:AU146927 Em:AV663379.1 FT Em:AV728759 Em:AV753946 Em:AW117250.1 Em:AW117557.1 FT Em:AW135797.1 Em:AW138652 Em:AW204173.1 Em:AW241470.1 FT Em:AW294226 Em:AW341405 Em:AW493861.1 Em:BB625106 FT Em:BB655948.1 Em:BE042974 Em:BE045613.1 Em:BE106535.1 FT Em:BE502898 Em:BE504186 Em:BE504251 Em:BE550833 FT Em:BE550844.1 Em:BE551070 Em:BE551091 Em:BE670616 FT Em:BE671275 Em:BE673741.1 Em:BE864200.1 Em:BE954159.1 FT Em:BF110233 Em:BF224080 Em:BF376997.1 Em:BF377003.1 FT Em:BF433170 Em:BF441770.1 Em:BF441771.1 Em:BF444551.1 FT Em:BF460636 Em:BF469189.1 Em:BF567811 Em:BF567892 FT Em:BF888097.1 Em:BF959693.1 Em:BG055319 Em:BG999387 FT Em:BI392650.1 Em:BI395409 Em:BM541208.1 Em:BM661934 FT Em:BM670763 Em:BM673901.1 Em:BM677716 Em:BM681009 FT Em:BM687871 Em:BM698672 Em:BM701669 Em:BM717038.1 FT Em:BM725997 Em:BM938097.1 Em:BM947495.1 Em:BQ042153 FT Em:BQ339609 Em:BQ570706.1 Em:H09155 Em:H09212 Em:H46725 FT Em:H46798 Em:W25905.1 Em:Z45816" FT CDS join(AL138958.18:131711..131811,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:37806..37879, FT AL356316.18:40137..40206,AL356316.18:41737..41864, FT AL356316.18:43109..43220,AL356316.18:51156..51321, FT AL356316.18:53611..53738,AL356316.18:54809..54886, FT AL356316.18:58791..58879,AL356316.18:59539..59583, FT AL356316.18:63774..63849,AL356316.18:70585..70690, FT AL356316.18:71428..71510,AL669971.2:2524..2573, FT AL669971.2:4785..4854,AL669971.2:6531..6615, FT AL669971.2:7524..7663,AL669971.2:9535..9673, FT AL669971.2:17351..17415,26273311..26273483, FT 26343184..26343367,26348987..26349097,26402256..26402330, FT AL157366.12:10483..10605,AL157366.12:12866..12944, FT AL157366.12:33515..33576,AL157366.12:34124..34180, FT AL157366.12:35621..35728, FT complement(AL138815.6:60661..60749), FT complement(AL138815.6:53645..53749), FT complement(AL138815.6:9702..9793), FT complement(AL138815.6:2339..2436)) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /standard_name="OTTHUMP00000018151" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: proteins: Sw:P70704 Sw:P98200 Sw:Q29449 FT Sw:Q9NTI2 Sw:Q9NTI2 Sw:Q9Y2Q0 Tr:O94296 Tr:Q8T0I4 Tr:Q9D4I4 FT Tr:Q9V6P5" FT /protein_id="CAH70146.1" FT /translation="MSRATSVGDQLEAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLP FT RFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHK FT ADNAVNKKKTIVLRNGMWHTIMWKEVAVGDIVKVVNGQYLPADVVLLSSSEPQAMCYVE FT TANLDGETNLKIRQGLSHTADMQTREVLMKLSGTIECEGPNRHLYDFTGNLNLDGKSLV FT ALGPDQILLRGTQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLF FT GILLVMALVSSAGALYWNRSHGEKNWYIKKMDTTSDNFGYNLLTFIILYNNLIPISLLV FT TLEVVKYTQALFINWDTDMYYIGNDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMN FT FKKCSIAGVTYGHFPELAREPSSDDFCRMPPPCSDSCDFDDPRLLKNIEDRHPTAPCIQ FT EFLTLLAVCHTVVPEKDGDNIIYQASSPDEAALVKGAKKLGFVFTARTPFSVIIEAMGQ FT EQTFGILNVLEFSSDRKRMSVIVRTPSGRLRLYCKGADNVIFERLSKDSKYMEETLCHL FT EYFATEGLRTLCVAYADLSENEYEEWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLG FT ATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALILLKED FT SLDATRAAITQHCTDLGNLLGKENDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVIC FT CRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDY FT AIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERW FT CIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYKITQNGEGFNTKVFWGHCINALV FT HSLILFWFPMKALEHDTVLTSGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHL FT AVWGSMLTWLVFFGIYSTIWPTIPIAPDMRGQATMVLSSAHFWLGLFLVPTACLIEDVA FT WRAAKHTCKKTLLEEVQELETKSRVLGKAVLRDSNGKRLNERDRLIKRLGRKTPPTLFR FT GSSLQQGVPHGYAFSQEEHGAVSQEEVIRAYDTTKKKSRKK" FT misc_feature complement(26226500) FT /note="Clone_left_end: RP11-111G7" FT misc_feature 26402819..26438251 FT /note="annotated region of clone" FT misc_feature 26404086..26404165 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 26404650..26404715 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 26434252 FT /note="Clone_left_end: RP11-141F12" FT CDS complement(26437388..26437805) FT /pseudo FT /locus_tag="RP11-467D10.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:O00252" FT mRNA join(AL138958.18:131512..131811,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:37806..37879, FT AL356316.18:40137..40206,AL356316.18:41737..41864, FT AL356316.18:43109..43220,AL356316.18:51156..51321, FT AL356316.18:53611..53738,AL356316.18:54809..54886, FT AL356316.18:58791..58879,AL356316.18:59539..59583, FT AL356316.18:63774..63849,AL356316.18:70585..70690, FT AL356316.18:71428..71510,AL669971.2:2524..2573, FT AL669971.2:4785..4854,AL669971.2:6531..6615, FT AL669971.2:7524..7663,AL669971.2:9535..9673, FT AL669971.2:17351..17415, FT complement(AL136438.10:129336..129508), FT complement(AL136438.10:59452..59635), FT complement(AL136438.10:53722..53832), FT complement(AL136438.10:489..563),26411301..26411423, FT 26413684..26413762,26434333..26434394,26434942..26434998, FT 26436439..26436546,complement(AL138815.6:60661..60749), FT complement(AL138815.6:53645..53749), FT complement(AL138815.6:9702..9793), FT complement(AL138815.6:1..2436),AL139004.11:101..3628) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: cDNAs: Em:AF156550.1 Em:AF236871.1 FT Em:AK022096 Em:AK094653.1 Em:AL137256.1 Em:AL390129.1" FT /note="match: ESTs: Em:AA106235 Em:AA442068 Em:AA442172 FT Em:AA446696.1 Em:AA460901 Em:AA621544 Em:AA626648.1 FT Em:AA670338 Em:AA670338.1 Em:AA928117.1 Em:AA934530 FT Em:AA937776.1 Em:AA939001 Em:AI039719 Em:AI290906 FT Em:AI298738 Em:AI301142 Em:AI339371 Em:AI348287 Em:AI376848 FT Em:AI390175.1 Em:AI415030.1 Em:AI457291 Em:AI681185 FT Em:AI694347.1 Em:AI697881 Em:AI702177 Em:AI702879 FT Em:AI871240 Em:AI871743.1 Em:AI873068.1 Em:AI912550 FT Em:AI989494.1 Em:AU121019 Em:AU146927 Em:AV663379.1 FT Em:AV728759 Em:AV753946 Em:AW117250.1 Em:AW117557.1 FT Em:AW135797.1 Em:AW138652 Em:AW204173.1 Em:AW241470.1 FT Em:AW294226 Em:AW341405 Em:AW493861.1 Em:BB625106 FT Em:BB655948.1 Em:BE042974 Em:BE045613.1 Em:BE106535.1 FT Em:BE502898 Em:BE504186 Em:BE504251 Em:BE550833 FT Em:BE550844.1 Em:BE551070 Em:BE551091 Em:BE670616 FT Em:BE671275 Em:BE673741.1 Em:BE864200.1 Em:BE954159.1 FT Em:BF110233 Em:BF224080 Em:BF376997.1 Em:BF377003.1 FT Em:BF433170 Em:BF441770.1 Em:BF441771.1 Em:BF444551.1 FT Em:BF460636 Em:BF469189.1 Em:BF567811 Em:BF567892 FT Em:BF888097.1 Em:BF959693.1 Em:BG055319 Em:BG999387 FT Em:BI392650.1 Em:BI395409 Em:BM541208.1 Em:BM661934 FT Em:BM670763 Em:BM673901.1 Em:BM677716 Em:BM681009 FT Em:BM687871 Em:BM698672 Em:BM701669 Em:BM717038.1 FT Em:BM725997 Em:BM938097.1 Em:BM947495.1 Em:BQ042153 FT Em:BQ339609 Em:BQ570706.1 Em:H09155 Em:H09212 Em:H46725 FT Em:H46798 Em:W25905.1 Em:Z45816" FT CDS join(AL138958.18:131711..131811,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:37806..37879, FT AL356316.18:40137..40206,AL356316.18:41737..41864, FT AL356316.18:43109..43220,AL356316.18:51156..51321, FT AL356316.18:53611..53738,AL356316.18:54809..54886, FT AL356316.18:58791..58879,AL356316.18:59539..59583, FT AL356316.18:63774..63849,AL356316.18:70585..70690, FT AL356316.18:71428..71510,AL669971.2:2524..2573, FT AL669971.2:4785..4854,AL669971.2:6531..6615, FT AL669971.2:7524..7663,AL669971.2:9535..9673, FT AL669971.2:17351..17415, FT complement(AL136438.10:129336..129508), FT complement(AL136438.10:59452..59635), FT complement(AL136438.10:53722..53832), FT complement(AL136438.10:489..563),26411301..26411423, FT 26413684..26413762,26434333..26434394,26434942..26434998, FT 26436439..26436546,complement(AL138815.6:60661..60749), FT complement(AL138815.6:53645..53749), FT complement(AL138815.6:9702..9793), FT complement(AL138815.6:2339..2436)) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /standard_name="OTTHUMP00000018151" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: proteins: Sw:P70704 Sw:P98200 Sw:Q29449 FT Sw:Q9NTI2 Sw:Q9NTI2 Sw:Q9Y2Q0 Tr:O94296 Tr:Q8T0I4 Tr:Q9D4I4 FT Tr:Q9V6P5" FT /protein_id="CAH74073.1" FT /translation="MSRATSVGDQLEAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLP FT RFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHK FT ADNAVNKKKTIVLRNGMWHTIMWKEVAVGDIVKVVNGQYLPADVVLLSSSEPQAMCYVE FT TANLDGETNLKIRQGLSHTADMQTREVLMKLSGTIECEGPNRHLYDFTGNLNLDGKSLV FT ALGPDQILLRGTQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLF FT GILLVMALVSSAGALYWNRSHGEKNWYIKKMDTTSDNFGYNLLTFIILYNNLIPISLLV FT TLEVVKYTQALFINWDTDMYYIGNDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMN FT FKKCSIAGVTYGHFPELAREPSSDDFCRMPPPCSDSCDFDDPRLLKNIEDRHPTAPCIQ FT EFLTLLAVCHTVVPEKDGDNIIYQASSPDEAALVKGAKKLGFVFTARTPFSVIIEAMGQ FT EQTFGILNVLEFSSDRKRMSVIVRTPSGRLRLYCKGADNVIFERLSKDSKYMEETLCHL FT EYFATEGLRTLCVAYADLSENEYEEWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLG FT ATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALILLKED FT SLDATRAAITQHCTDLGNLLGKENDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVIC FT CRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDY FT AIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERW FT CIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYKITQNGEGFNTKVFWGHCINALV FT HSLILFWFPMKALEHDTVLTSGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHL FT AVWGSMLTWLVFFGIYSTIWPTIPIAPDMRGQATMVLSSAHFWLGLFLVPTACLIEDVA FT WRAAKHTCKKTLLEEVQELETKSRVLGKAVLRDSNGKRLNERDRLIKRLGRKTPPTLFR FT GSSLQQGVPHGYAFSQEEHGAVSQEEVIRAYDTTKKKSRKK" FT misc_feature complement(26438252..26596461) FT /note="annotated region of clone" FT polyA_site 26594429 FT polyA_site 26594427 FT polyA_signal 26594404..26594409 FT mRNA join(26541355..26541418,26542713..26542817) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-002" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: ESTs: Em:AI668620 Em:AI733546 Em:AI791937 FT Em:H39762 Em:R83119" FT misc_feature complement(26514120) FT /note="Clone_left_end: RP11-467D10" FT misc_feature complement(26465170) FT /note="Clone_right_end: RP11-398O19" FT mRNA join(AL138958.18:131512..131811,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:37806..37879, FT AL356316.18:40137..40206,AL356316.18:41737..41864, FT AL356316.18:43109..43220,AL356316.18:51156..51321, FT AL356316.18:53611..53738,AL356316.18:54809..54886, FT AL356316.18:58791..58879,AL356316.18:59539..59583, FT AL356316.18:63774..63849,AL356316.18:70585..70690, FT AL356316.18:71428..71510,AL669971.2:2524..2573, FT AL669971.2:4785..4854,AL669971.2:6531..6615, FT AL669971.2:7524..7663,AL669971.2:9535..9673, FT AL669971.2:17351..17415, FT complement(AL136438.10:129336..129508), FT complement(AL136438.10:59452..59635), FT complement(AL136438.10:53722..53832), FT complement(AL136438.10:489..563),AL157366.12:10483..10605, FT AL157366.12:12866..12944,AL157366.12:33515..33576, FT AL157366.12:34124..34180,AL157366.12:35621..35728, FT 26535713..26535801,26542713..26542817,26586669..26586760, FT 26594026..26596461,AL139004.11:101..3628) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: cDNAs: Em:AF156550.1 Em:AF236871.1 FT Em:AK022096 Em:AK094653.1 Em:AL137256.1 Em:AL390129.1" FT /note="match: ESTs: Em:AA106235 Em:AA442068 Em:AA442172 FT Em:AA446696.1 Em:AA460901 Em:AA621544 Em:AA626648.1 FT Em:AA670338 Em:AA670338.1 Em:AA928117.1 Em:AA934530 FT Em:AA937776.1 Em:AA939001 Em:AI039719 Em:AI290906 FT Em:AI298738 Em:AI301142 Em:AI339371 Em:AI348287 Em:AI376848 FT Em:AI390175.1 Em:AI415030.1 Em:AI457291 Em:AI681185 FT Em:AI694347.1 Em:AI697881 Em:AI702177 Em:AI702879 FT Em:AI871240 Em:AI871743.1 Em:AI873068.1 Em:AI912550 FT Em:AI989494.1 Em:AU121019 Em:AU146927 Em:AV663379.1 FT Em:AV728759 Em:AV753946 Em:AW117250.1 Em:AW117557.1 FT Em:AW135797.1 Em:AW138652 Em:AW204173.1 Em:AW241470.1 FT Em:AW294226 Em:AW341405 Em:AW493861.1 Em:BB625106 FT Em:BB655948.1 Em:BE042974 Em:BE045613.1 Em:BE106535.1 FT Em:BE502898 Em:BE504186 Em:BE504251 Em:BE550833 FT Em:BE550844.1 Em:BE551070 Em:BE551091 Em:BE670616 FT Em:BE671275 Em:BE673741.1 Em:BE864200.1 Em:BE954159.1 FT Em:BF110233 Em:BF224080 Em:BF376997.1 Em:BF377003.1 FT Em:BF433170 Em:BF441770.1 Em:BF441771.1 Em:BF444551.1 FT Em:BF460636 Em:BF469189.1 Em:BF567811 Em:BF567892 FT Em:BF888097.1 Em:BF959693.1 Em:BG055319 Em:BG999387 FT Em:BI392650.1 Em:BI395409 Em:BM541208.1 Em:BM661934 FT Em:BM670763 Em:BM673901.1 Em:BM677716 Em:BM681009 FT Em:BM687871 Em:BM698672 Em:BM701669 Em:BM717038.1 FT Em:BM725997 Em:BM938097.1 Em:BM947495.1 Em:BQ042153 FT Em:BQ339609 Em:BQ570706.1 Em:H09155 Em:H09212 Em:H46725 FT Em:H46798 Em:W25905.1 Em:Z45816" FT CDS join(AL138958.18:131711..131811,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:37806..37879, FT AL356316.18:40137..40206,AL356316.18:41737..41864, FT AL356316.18:43109..43220,AL356316.18:51156..51321, FT AL356316.18:53611..53738,AL356316.18:54809..54886, FT AL356316.18:58791..58879,AL356316.18:59539..59583, FT AL356316.18:63774..63849,AL356316.18:70585..70690, FT AL356316.18:71428..71510,AL669971.2:2524..2573, FT AL669971.2:4785..4854,AL669971.2:6531..6615, FT AL669971.2:7524..7663,AL669971.2:9535..9673, FT AL669971.2:17351..17415, FT complement(AL136438.10:129336..129508), FT complement(AL136438.10:59452..59635), FT complement(AL136438.10:53722..53832), FT complement(AL136438.10:489..563),AL157366.12:10483..10605, FT AL157366.12:12866..12944,AL157366.12:33515..33576, FT AL157366.12:34124..34180,AL157366.12:35621..35728, FT 26535713..26535801,26542713..26542817,26586669..26586760, FT 26594026..26594123) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /standard_name="OTTHUMP00000018151" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: proteins: Sw:P70704 Sw:P98200 Sw:Q29449 FT Sw:Q9NTI2 Sw:Q9NTI2 Sw:Q9Y2Q0 Tr:O94296 Tr:Q8T0I4 Tr:Q9D4I4 FT Tr:Q9V6P5" FT /protein_id="CAH70513.1" FT /translation="MSRATSVGDQLEAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLP FT RFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHK FT ADNAVNKKKTIVLRNGMWHTIMWKEVAVGDIVKVVNGQYLPADVVLLSSSEPQAMCYVE FT TANLDGETNLKIRQGLSHTADMQTREVLMKLSGTIECEGPNRHLYDFTGNLNLDGKSLV FT ALGPDQILLRGTQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLF FT GILLVMALVSSAGALYWNRSHGEKNWYIKKMDTTSDNFGYNLLTFIILYNNLIPISLLV FT TLEVVKYTQALFINWDTDMYYIGNDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMN FT FKKCSIAGVTYGHFPELAREPSSDDFCRMPPPCSDSCDFDDPRLLKNIEDRHPTAPCIQ FT EFLTLLAVCHTVVPEKDGDNIIYQASSPDEAALVKGAKKLGFVFTARTPFSVIIEAMGQ FT EQTFGILNVLEFSSDRKRMSVIVRTPSGRLRLYCKGADNVIFERLSKDSKYMEETLCHL FT EYFATEGLRTLCVAYADLSENEYEEWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLG FT ATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALILLKED FT SLDATRAAITQHCTDLGNLLGKENDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVIC FT CRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDY FT AIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERW FT CIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYKITQNGEGFNTKVFWGHCINALV FT HSLILFWFPMKALEHDTVLTSGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHL FT AVWGSMLTWLVFFGIYSTIWPTIPIAPDMRGQATMVLSSAHFWLGLFLVPTACLIEDVA FT WRAAKHTCKKTLLEEVQELETKSRVLGKAVLRDSNGKRLNERDRLIKRLGRKTPPTLFR FT GSSLQQGVPHGYAFSQEEHGAVSQEEVIRAYDTTKKKSRKK" FT misc_feature complement(26438252) FT /note="Clone_left_end: RP11-141F12" FT misc_feature 26596462..26647046 FT /note="annotated region of clone" FT polyA_signal 26599236..26599241 FT polyA_signal 26599968..26599973 FT polyA_site 26599989 FT polyA_site complement(26618735) FT polyA_signal complement(26618751..26618756) FT mRNA complement(join(26618735..26621204,26624780..26625198)) FT /gene="TMEM46" FT /locus_tag="RP11-398O19.4-001" FT /product="transmembrane protein 46" FT /note="match: ESTs: Em:AA312568 Em:AA587314 Em:AA976712 FT Em:AA983251 Em:AI646253 Em:AI694685 Em:AV605540 Em:AW060473 FT Em:AW060815 Em:AW106301 Em:AW416168 Em:AW664964 Em:AW769715 FT Em:AW962864 Em:BB097547 Em:BB832147 Em:BB832382 Em:BE165449 FT Em:BE349943 Em:BE350279 Em:BE464806 Em:BE501619 Em:BF110498 FT Em:BF162640 Em:BF166105 Em:BF196235 Em:BF562643 Em:BF578914 FT Em:BF579209 Em:BG058275 Em:BG109100 Em:BG171225 Em:BG358247 FT Em:BG359291 Em:BG644305 Em:BG800793 Em:BG921846 Em:BG986276 FT Em:BI250841 Em:BI449671 Em:BI650735 Em:BI651477 Em:BI661884 FT Em:BM993116 Em:BM997838" FT /note="match: cDNAs: Em:BC024118" FT CDS complement(join(26620651..26621204,26624780..26625113)) FT /gene="TMEM46" FT /locus_tag="RP11-398O19.4-001" FT /standard_name="OTTHUMP00000018153" FT /product="transmembrane protein 46" FT /note="match: proteins: Sw:Q8QZV2" FT /protein_id="CAH73406.1" FT /translation="MWGARRSSVSSSWNAASLLQLLLAALLAAGARASGEYCHGWLDAQ FT GVWRIGFQCPERFDGGDATICCGSCALRYCCSSAEARLDQGGCDNDRQQGAGEPGRADK FT DGPDGSAVPIYVPFLIVGSVFVAFIILGSLVAACCCRCLRPKQDPQQSRAPGGNRLMET FT IPMIPSASTSRGSSSRQSSTAASSSSSANSGARAPPTRSQTNCCLPEGTMNNVYVNMPT FT NFSVLNCQQATQIVPHQGQYLHPPYVGYTVQHDSVPMTAVPPFMDGLQPGYRQIQSPFP FT HTNSEQKMYPAVTV" FT mRNA complement(join(26626414..26626810,26627486..26627523)) FT /locus_tag="RP11-398O19.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA889663 Em:AI204439 Em:AI913799 FT Em:AI915366 Em:AW183524" FT misc_feature 26646847 FT /note="Clone_left_end: RP11-380N8" FT mRNA join(AL138958.18:131512..131811,AL356316.18:29817..29916, FT AL356316.18:30380..30478,AL356316.18:32090..32135, FT AL356316.18:33091..33131,AL356316.18:37806..37879, FT AL356316.18:40137..40206,AL356316.18:41737..41864, FT AL356316.18:43109..43220,AL356316.18:51156..51321, FT AL356316.18:53611..53738,AL356316.18:54809..54886, FT AL356316.18:58791..58879,AL356316.18:59539..59583, FT AL356316.18:63774..63849,AL356316.18:70585..70690, FT AL356316.18:71428..71510,AL669971.2:2524..2573, FT AL669971.2:4785..4854,AL669971.2:6531..6615, FT AL669971.2:7524..7663,AL669971.2:9535..9673, FT AL669971.2:17351..17415, FT complement(AL136438.10:129336..129508), FT complement(AL136438.10:59452..59635), FT complement(AL136438.10:53722..53832), FT complement(AL136438.10:489..563),AL157366.12:10483..10605, FT AL157366.12:12866..12944,AL157366.12:33515..33576, FT AL157366.12:34124..34180,AL157366.12:35621..35728, FT complement(AL138815.6:60661..60749), FT complement(AL138815.6:53645..53749), FT complement(AL138815.6:9702..9793), FT complement(AL138815.6:1..2436),26596462..26599989) FT /gene="ATP8A2" FT /locus_tag="RP11-141F12.1-001" FT /product="ATPase, aminophospholipid transporter-like, Class FT I, type 8A, member 2" FT /note="match: ESTs: Em:AA106235 Em:AA442068 Em:AA442172 FT Em:AA446696.1 Em:AA460901 Em:AA621544 Em:AA626648.1 FT Em:AA670338 Em:AA670338.1 Em:AA928117.1 Em:AA934530 FT Em:AA937776.1 Em:AA939001 Em:AI039719 Em:AI290906 FT Em:AI298738 Em:AI301142 Em:AI339371 Em:AI348287 Em:AI376848 FT Em:AI390175.1 Em:AI415030.1 Em:AI457291 Em:AI681185 FT Em:AI694347.1 Em:AI697881 Em:AI702177 Em:AI702879 FT Em:AI871240 Em:AI871743.1 Em:AI873068.1 Em:AI912550 FT Em:AI989494.1 Em:AU121019 Em:AU146927 Em:AV663379.1 FT Em:AV728759 Em:AV753946 Em:AW117250.1 Em:AW117557.1 FT Em:AW135797.1 Em:AW138652 Em:AW204173.1 Em:AW241470.1 FT Em:AW294226 Em:AW341405 Em:AW493861.1 Em:BB625106 FT Em:BB655948.1 Em:BE042974 Em:BE045613.1 Em:BE106535.1 FT Em:BE502898 Em:BE504186 Em:BE504251 Em:BE550833 FT Em:BE550844.1 Em:BE551070 Em:BE551091 Em:BE670616 FT Em:BE671275 Em:BE673741.1 Em:BE864200.1 Em:BE954159.1 FT Em:BF110233 Em:BF224080 Em:BF376997.1 Em:BF377003.1 FT Em:BF433170 Em:BF441770.1 Em:BF441771.1 Em:BF444551.1 FT Em:BF460636 Em:BF469189.1 Em:BF567811 Em:BF567892 FT Em:BF888097.1 Em:BF959693.1 Em:BG055319 Em:BG999387 FT Em:BI392650.1 Em:BI395409 Em:BM541208.1 Em:BM661934 FT Em:BM670763 Em:BM673901.1 Em:BM677716 Em:BM681009 FT Em:BM687871 Em:BM698672 Em:BM701669 Em:BM717038.1 FT Em:BM725997 Em:BM938097.1 Em:BM947495.1 Em:BQ042153 FT Em:BQ339609 Em:BQ570706.1 Em:H09155 Em:H09212 Em:H46725 FT Em:H46798 Em:W25905.1 Em:Z45816" FT /note="match: cDNAs: Em:AF156550.1 Em:AF236871.1 FT Em:AK022096 Em:AK094653.1 Em:AL137256.1 Em:AL390129.1" FT misc_feature 26647047..26818106 FT /note="annotated region of clone" FT misc_feature 26650959..26651115 FT /note="sequence from overlapping clone bA398O19 (AL139004). FT Assembly confirmed by restriction digest" FT polyA_signal complement(26689975..26689980) FT CDS complement(join(26691686..26692103,26692265..26692511, FT 26693063..26693102)) FT /pseudo FT /locus_tag="RP11-380N8.1-001" FT /product="prune homolog (Drosophila)(PRUNE) pseudogene" FT /note="match: proteins: Sw:Q9D217 Tr:Q96JU5 Tr:Q9C071 FT Tr:Q9C072 Tr:Q9UIV0" FT polyA_site complement(26706253) FT polyA_signal complement(26706273..26706278) FT misc_feature 26717845 FT /note="Clone_right_end: RP11-398O19" FT CDS complement(join(26688547..26688632,26689181..26689287, FT 26693869..26693944,26694286..26694339,26694979..26695068, FT 26701011..26701088,26702341..26702464,26704238..26704397, FT 26705229..26705339,26706461..26706589,26709666..26709731, FT 26716446..26716513,26718995..26719038,26723305..26723345, FT 26724946..26725044,26728214..26728313)) FT /pseudo FT /locus_tag="RP11-380N8.4-001" FT /product="ATPase, aminophospholipid transporter-like, class FT I, type 8A, member 2 (ATP8A2) pseudogene" FT /note="match: proteins: Sw:P39524 Sw:P70704 Sw:Q29449 FT Sw:Q9Y2Q0 Tr:O94296 Tr:Q9D4I4 Tr:Q9P424 Tr:Q9U280 FT Tr:Q9V6P5" FT polyA_site complement(26786899) FT polyA_site complement(26786905) FT polyA_site complement(26786910) FT polyA_site complement(26786912) FT polyA_signal complement(26786924..26786929) FT CDS complement(join(26787961..26789729,26792648..26792743, FT 26793594..26793786)) FT /gene="RNF6" FT /locus_tag="RP11-380N8.5-001" FT /standard_name="OTTHUMP00000018154" FT /product="ring finger protein (C3H2C3 type) 6" FT /protein_id="CAH73183.1" FT /translation="MNQSRSRSDGGSEETLPQDHNHHENERRWQQERLHREEAYYQFIN FT ELNDEDYRLMRDHNLLGTPGEITSEELQQRLDGVKEQLASQPDLRDGTNYRDSEVPRES FT SHEDSLLEWLNTFRRTGNATRSGQNGNQTWRAVSRTNPNNGEFRFSLEIHVNHENRGFE FT IHGEDYTDIPLSDSNRDHTANRQQRSTSPVARRTRSQTSVNFNGSSSNIPRTRLASRGQ FT NPAEGSFSTLGRLRNGIGGAAGIPRANASRTNFSSHTNQSGGSELRQREGQRFGAAHVW FT ENGARSNVTVRNTNQRLEPIRLRSTSNSRSRSPIQRQSGTVYHNSQRESRPVQQTTRRS FT VRRRGRTRVFLEQDRERERRGTAYTPFSNSRLVSRITVEEGEESSRSSTAVRRHPTITL FT DLQVRRIRPGENRDRDSIANRTRSRVGLAENTVTIESNSGGFRRTISRLERSGIRTYVS FT TITVPLRRISENELVEPSSVALRSILRQIMTGFGELSSLMEADSESELQRNGQHLPDMH FT SELSNLGTDNNRSQHREGSSQDRQAQGDSTEMHGENETTQPHTRNSDSRGGRQLRNPNN FT LVETGTLPILRLAHFFLLNESDDDDRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVC FT ISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSNIANNG" FT mRNA complement(join(26786912..26789729,26792648..26792743, FT 26793594..26793804,26795385..26795467,26795651..26795840)) FT /gene="RNF6" FT /locus_tag="RP11-380N8.5-002" FT /product="ring finger protein (C3H2C3 type) 6" FT /note="match: cDNAs: Em:AY009109" FT mRNA complement(join(26793433..26793804,26795385..26795467, FT 26795651..26795828)) FT /gene="RNF6" FT /locus_tag="RP11-380N8.5-005" FT /product="ring finger protein (C3H2C3 type) 6" FT /note="match: ESTs: Em:BI461505" FT mRNA complement(join(26786905..26789729,26792648..26792743, FT 26793594..26793804,26795385..26795467,26795919..26795979)) FT /gene="RNF6" FT /locus_tag="RP11-380N8.5-001" FT /product="ring finger protein (C3H2C3 type) 6" FT /note="match: cDNAs: Em:AJ010347.1 Em:CR859911.1" FT mRNA complement(join(26789276..26789729,26792648..26792725, FT 26793594..26793804,26795385..26795467,26795919..26795947)) FT /gene="RNF6" FT /locus_tag="RP11-380N8.5-004" FT /product="ring finger protein (C3H2C3 type) 6" FT /note="match: ESTs: Em:BE799140" FT mRNA complement(join(26795390..26795467,26795972..26796226)) FT /gene="RNF6" FT /locus_tag="RP11-380N8.5-003" FT /product="ring finger protein (C3H2C3 type) 6" FT /note="match: ESTs: Em:AA373350" FT mRNA complement(join(26706253..26706589,26789611..26789729, FT 26792648..26792743,26793594..26793804,26795385..26795467, FT 26796140..26796398)) FT /gene="RNF6" FT /locus_tag="RP11-380N8.5-007" FT /product="ring finger protein (C3H2C3 type) 6" FT /note="match: ESTs: Em:N48089" FT /note="match: cDNAs: Em:AF293342" FT mRNA complement(join(26786905..26789729,26792648..26792743, FT 26793594..26793804,26795385..26795467,26796140..26796791)) FT /gene="RNF6" FT /locus_tag="RP11-380N8.5-006" FT /product="ring finger protein (C3H2C3 type) 6" FT /note="match: ESTs: Em:AL549975.3 Em:AW263081.1 FT Em:BG719265.1 Em:CN295073.1 Em:DA851963.1 Em:DA854115.1 FT Em:DA854179.1" FT /note="match: cDNAs: Em:AJ010346.1" FT CDS join(26808350..26808602,26808890..26809277, FT 26809598..26811266) FT /pseudo FT /locus_tag="RP11-380N8.3-001" FT /product="protein-kinase, interferon-inducible double FT stranded RNA dependent inhibitor, repressor of (P58 FT repressor)(PRKRIR) pseudogene" FT /note="match: proteins: Sw:O43422 Sw:Q9CUX1 Tr:Q8R201" FT misc_feature 26818006 FT /note="Clone_right_end: RP11-380N8" FT misc_feature 26818107..26856165 FT /note="annotated region of clone" FT mRNA join(26828276..26828906,AL159159.21:55639..55714, FT AL159159.21:67144..67254,AL159159.21:71812..71952, FT AL159159.21:100886..100943,AL159159.21:103283..103414, FT AL159159.21:111439..111582,AL159159.21:114357..114426, FT AL159159.21:115225..115297,AL159159.21:118525..118622, FT AL159159.21:119341..119419,AL159159.21:119538..119696, FT AL159159.21:122028..123310) FT /gene="CDK8" FT /locus_tag="RP11-88J11.1-001" FT /product="cyclin-dependent kinase 8" FT /note="match: cDNAs: Em:BC104492.1 Em:BC105950.1 FT Em:X85753.1" FT CDS join(26828779..26828906,AL159159.21:55639..55714, FT AL159159.21:67144..67254,AL159159.21:71812..71952, FT AL159159.21:100886..100943,AL159159.21:103283..103414, FT AL159159.21:111439..111582,AL159159.21:114357..114426, FT AL159159.21:115225..115297,AL159159.21:118525..118622, FT AL159159.21:119341..119419,AL159159.21:119538..119696, FT AL159159.21:122028..122153) FT /gene="CDK8" FT /locus_tag="RP11-88J11.1-001" FT /standard_name="OTTHUMP00000018158" FT /product="cyclin-dependent kinase 8" FT /note="match: proteins: Sw:P49336.1 Tr:Q5VUF3.1 FT Tr:Q6P3N6.1" FT /protein_id="CAH72300.1" FT /translation="MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKD FT DKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDL FT WHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG FT PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGC FT IFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK FT DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL FT PTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSSHTQGP FT PLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSATSQQPPQYS FT HQTHRY" FT misc_feature 26855966 FT /note="Clone_left_end: RP11-88J11" FT misc_feature 26856166..27000591 FT /note="annotated region of clone" FT mRNA join(AL590108.5:10270..10900,26911704..26911779, FT 26923209..26923319,26927877..26928017,26956951..26957008, FT 26959348..26959479,26967504..26967647,26970422..26970491, FT 26971290..26971362,26974590..26974687,26975406..26975484, FT 26975603..26975761,26978093..26979375) FT /gene="CDK8" FT /locus_tag="RP11-88J11.1-001" FT /product="cyclin-dependent kinase 8" FT /note="match: cDNAs: Em:BC104492.1 Em:BC105950.1 FT Em:X85753.1" FT CDS join(AL590108.5:10773..10900,26911704..26911779, FT 26923209..26923319,26927877..26928017,26956951..26957008, FT 26959348..26959479,26967504..26967647,26970422..26970491, FT 26971290..26971362,26974590..26974687,26975406..26975484, FT 26975603..26975761,26978093..26978218) FT /gene="CDK8" FT /locus_tag="RP11-88J11.1-001" FT /standard_name="OTTHUMP00000018158" FT /product="cyclin-dependent kinase 8" FT /note="match: proteins: Sw:P49336.1 Tr:Q5VUF3.1 FT Tr:Q6P3N6.1" FT /protein_id="CAI16960.1" FT /translation="MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKD FT DKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDL FT WHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG FT PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGC FT IFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK FT DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL FT PTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSSHTQGP FT PLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSATSQQPPQYS FT HQTHRY" FT mRNA join(26911704..26911779,26923209..26923319, FT 26927877..26928017,26959348..26959479,26967504..26967647, FT 26970422..26970491,26971290..26971362,26974590..26974652) FT /gene="CDK8" FT /locus_tag="RP11-88J11.1-004" FT /product="cyclin-dependent kinase 8" FT /note="match: ESTs: Em:BG208802" FT mRNA join(26959348..26959479,26970422..26970491, FT 26971290..26971362,26974590..26974687,26975406..26975482, FT 26975603..26975736) FT /gene="CDK8" FT /locus_tag="RP11-88J11.1-005" FT /product="cyclin-dependent kinase 8" FT /note="match: ESTs: Em:BE884669" FT mRNA join(26970354..26970491,26971290..26971362, FT 26974590..26974687,26975406..26975484,26975603..26975761, FT 26978093..26979315) FT /gene="CDK8" FT /locus_tag="RP11-88J11.1-002" FT /product="cyclin-dependent kinase 8" FT /note="match: cDNAs: Em:BC025046" FT /note="match: ESTs: Em:BG923533" FT mRNA join(26974210..26974687,26975406..26975484, FT 26975606..26975761,26978093..26979375) FT /gene="CDK8" FT /locus_tag="RP11-88J11.1-003" FT /product="cyclin-dependent kinase 8" FT /note="match: cDNAs: Em:AB052177 Em:L23311" FT /note="match: ESTs: Em:AL535088 Em:AW416368 Em:BQ433338" FT polyA_signal 26979349..26979354 FT polyA_site 26979375 FT misc_feature 27000592..27167378 FT /note="annotated region of clone" FT misc_feature 27000592 FT /note="Clone_left_end: RP11-570F6" FT misc_feature 27034731 FT /note="Clone_right_end: RP11-88J11" FT misc_feature 27046951 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1600bp by restriction digest data" FT misc_feature 27056328..27056582 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 27092500 FT /note="Clone_left_end: RP11-323P14" FT mRNA join(27131887..27131956,AL163538.9:19820..19917, FT AL163538.9:49120..49262,AL163538.9:71887..72021, FT AL163538.9:74376..74529,AL163538.9:78731..78848, FT AL163538.9:83408..83583,AL159978.14:3820..4086, FT AL159978.14:5373..5740,AL159978.14:8454..11714) FT /gene="WASF3" FT /locus_tag="RP11-496O3.2-001" FT /product="WAS protein family, member 3" FT /note="match: cDNAs: Em:AB020707.2 Em:AF454702.1" FT CDS 27151023..27151812 FT /pseudo FT /locus_tag="RP11-570F6.1-001" FT /product="ribosomal protein S3A (RPS3A) pseudogene" FT /note="match: proteins: Sw:O94438 Sw:P33444 Sw:P40910 FT Sw:P49395 Sw:P52813 Sw:P55830 Sw:P61247 Sw:P61247 Sw:P61247 FT Sw:P61247 Sw:P61247 Sw:P61247 Sw:P61247 Sw:Q09781 Tr:O97313 FT Tr:P93765 Tr:Q42108 Tr:Q564F3 Tr:Q564F3 Tr:Q8SS05 Tr:Q8SZD2 FT Tr:Q95P68 Tr:Q95V35 Tr:Q9MBB3 Tr:Q9XET2" FT misc_feature 27167378 FT /note="Clone_right_end: RP11-570F6" FT misc_feature 27167379..27251471 FT /note="annotated region of clone" FT mRNA complement(join(27212586..27212852,27215413..27215501)) FT /locus_tag="RP11-323P14.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA904591 Em:AW070512" FT mRNA join(27216083..27216240,27216398..27216540, FT 27239165..27239299,27241654..27241807,27246009..27246126, FT 27250686..27250761) FT /gene="WASF3" FT /locus_tag="RP11-496O3.2-002" FT /product="WAS protein family, member 3" FT /note="match: ESTs: Em:BG773052" FT CDS join(27216408..27216540,27239165..27239299, FT 27241654..27241807,27246009..27246126,27250686..27250861, FT AL159978.14:3820..4086,AL159978.14:5373..5740, FT AL159978.14:8454..8611) FT /gene="WASF3" FT /locus_tag="RP11-496O3.2-001" FT /standard_name="OTTHUMP00000018160" FT /product="WAS protein family, member 3" FT /note="match: proteins: Sw:Q9UPY6.2 Tr:Q5T8P4.1" FT /protein_id="CAH72487.1" FT /translation="MPLVKRNIEPRHLCRGALPEGITSELECVTNSTLAAIIRQLSSLS FT KHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSS FT TVQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKE FT KMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQ FT SVYHGASSEGSLSPDTRSHASDVTDYSYPATPNHSLHPQPVTPSYAAGDVPPHGPASQA FT AEHEYRPPSASARHMALNRPQQPPPPPPPQAPEGSQASAPMAPADYGMLPAQIIEYYNP FT SGPPPPPPPPVIPSAQTAFVSPLQMPMQPPFPASASSTHAAPPHPPSTGLLVTAPPPPG FT PPPPPPGPPGPGSSLSSSPMHGPPVAEAKRQEPAQPPISDARSDLLAAIRMGIQLKKVQ FT EQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSEFDENDWSD" FT misc_feature 27251272 FT /note="Clone_left_end: RP11-496O3" FT mRNA join(AL353789.18:131296..131365,27187098..27187195, FT 27216398..27216540,27239165..27239299,27241654..27241807, FT 27246009..27246126,27250686..27250861, FT AL159978.14:3820..4086,AL159978.14:5373..5740, FT AL159978.14:8454..11714) FT /gene="WASF3" FT /locus_tag="RP11-496O3.2-001" FT /product="WAS protein family, member 3" FT /note="match: cDNAs: Em:AB020707.2 Em:AF454702.1" FT misc_feature 27251472..27457813 FT /note="annotated region of clone" FT misc_feature 27255855 FT /note="Clone_right_end: RP11-323P14" FT polyA_signal 27262969..27262974 FT polyA_site 27262992 FT polyA_signal 27263041..27263046 FT polyA_site 27263065 FT CDS join(AL163538.9:49130..49262,AL163538.9:71887..72021, FT AL163538.9:74376..74529,AL163538.9:78731..78848, FT AL163538.9:83408..83583,27255191..27255457, FT 27256744..27257111,27259825..27259982) FT /gene="WASF3" FT /locus_tag="RP11-496O3.2-001" FT /standard_name="OTTHUMP00000018160" FT /product="WAS protein family, member 3" FT /note="match: proteins: Sw:Q9UPY6.2 Tr:Q5T8P4.1" FT /protein_id="CAI14691.1" FT /translation="MPLVKRNIEPRHLCRGALPEGITSELECVTNSTLAAIIRQLSSLS FT KHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDSTVEEVSLQDINMKKAFKSS FT TVQDQQVVSKNSIPNPVADIYNQSDKPPPLNILTPYRDDKKDGLKFYTDPSYFFDLWKE FT KMLQDTEDKRKEKRRQKEQKRIDGTTREVKKVRKARNRRQEWNMMAYDKELRPDNRLSQ FT SVYHGASSEGSLSPDTRSHASDVTDYSYPATPNHSLHPQPVTPSYAAGDVPPHGPASQA FT AEHEYRPPSASARHMALNRPQQPPPPPPPQAPEGSQASAPMAPADYGMLPAQIIEYYNP FT SGPPPPPPPPVIPSAQTAFVSPLQMPMQPPFPASASSTHAAPPHPPSTGLLVTAPPPPG FT PPPPPPGPPGPGSSLSSSPMHGPPVAEAKRQEPAQPPISDARSDLLAAIRMGIQLKKVQ FT EQREQEAKREPVGNDVATILSRRIAVEYSDSDDDSEFDENDWSD" FT polyA_site complement(27332447) FT mRNA complement(27332447..27334427) FT /gene="GPR12" FT /locus_tag="RP11-496O3.1-001" FT /product="G protein-coupled receptor 12" FT /note="match: ESTs: Em:AA977663.1 Em:BM727022.1 FT Em:CD559571.2 Em:DA790107.1" FT /note="match: cDNAs: Em:BC067449.1 Em:BC112144.1 FT Em:BC112146.1" FT polyA_signal complement(27332461..27332466) FT polyA_site complement(27332567) FT polyA_signal complement(27332586..27332591) FT CDS complement(27332960..27333964) FT /gene="GPR12" FT /locus_tag="RP11-496O3.1-001" FT /standard_name="OTTHUMP00000018159" FT /product="G protein-coupled receptor 12" FT /note="match: proteins: Sw:P30951.3 Sw:P35412.1 Sw:P47775.1 FT Tr:Q5T8P3.1 Tr:Q6NWS6.1 Tr:Q6NWS7.1 Tr:Q6NWS8.1" FT /protein_id="CAI14692.1" FT /translation="MNEDLKVNLSGLPRDYLDAAAAENISAAVSSRVPAVEPEPELVVN FT PWDIVLCTSGTLISCENAIVVLIIFHNPSLRAPMFLLIGSLALADLLAGIGLITNFVFA FT YLLQSEATKLVTIGLIVASFSASVCSLLAITVDRYLSLYYALTYHSERTVTFTYVMLVM FT LWGTSICLGLLPVMGWNCLRDESTCSVVRPLTKNNAAILSVSFLFMFALMLQLYIQICK FT IVMRHAHQIALQHHFLATSHYVTTRKGVSTLAIILGTFAACWMPFTLYSLIADYTYPSI FT YTYATLLPATYNSIINPVIYAFRNQEIQKALCLICCGCIPSSLAQRARSPSDV" FT mRNA join(AL353789.18:131296..131365,AL163538.9:19820..19917, FT AL163538.9:49120..49262,AL163538.9:71887..72021, FT AL163538.9:74376..74529,AL163538.9:78731..78848, FT AL163538.9:83408..83583,27255191..27255457, FT 27256744..27257111,27259825..27263085) FT /gene="WASF3" FT /locus_tag="RP11-496O3.2-001" FT /product="WAS protein family, member 3" FT /note="match: cDNAs: Em:AB020707.2 Em:AF454702.1" FT misc_feature 27437835 FT /note="Clone_left_end: RP11-545M8" FT misc_feature 27457713 FT /note="Clone_right_end: RP11-496O3" FT misc_feature 27457814..27601979 FT /note="annotated region of clone" FT misc_feature 27474152..27474191 FT /note="Sequence from uni-directional primer reads and dGTP FT big dye terminator reads only" FT CDS 27479499..27479998 FT /pseudo FT /locus_tag="RP11-545M8.1-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q9CRA9 Tr:Q9D7R0 Tr:Q9NVK5 FT Tr:Q9P034" FT misc_feature 27544853..27544904 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 27544905 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 520bp by restriction digest data" FT CDS 27551680..27551926 FT /pseudo FT /locus_tag="RP11-545M8.2-001" FT /product="ribosomal protein S21 (RPS21) pseudogene" FT /note="match: proteins: Sw:P05765 Sw:P63221 Sw:Q90YQ2 FT Sw:Q9CQR2 Tr:Q13666 Tr:Q8WVC2 Tr:Q9BYK1" FT misc_feature 27583302 FT /note="Clone_left_end: RP11-214A3" FT CDS complement(27591691..27592046) FT /pseudo FT /locus_tag="RP11-545M8.3-001" FT /product="ribosomal protein S20 (RPS20) pseudogene" FT /note="match: proteins: Sw:O74893 Sw:P23403 Sw:P35686 FT Sw:P49200 Sw:P49200 Sw:P49200 Sw:P49200 Sw:P55828 Sw:P55828 FT Sw:P55828 Sw:P60866 Sw:P60868 Tr:Q90YH0 Tr:Q90YQ3 Tr:Q962Q9 FT Tr:Q9STY6" FT misc_feature 27599977 FT /note="Clone_right_end: RP11-545M8" FT misc_feature 27602076..27643591 FT /note="annotated region of clone" FT misc_feature 27625504..27625610 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC FT clone.Restriction digest data confirm the assembly" FT misc_feature 27637881..27637973 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR.Restriction FT digest data confirm the assembly" FT misc_feature 27637974 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 150bp by restriction digest data" FT polyA_site complement(27640293) FT polyA_site complement(27640308) FT polyA_signal complement(27640308..27640313) FT polyA_signal complement(27640329..27640334) FT polyA_site complement(27642433) FT polyA_signal complement(27642448..27642453) FT misc_feature 27643390 FT /note="Clone_left_end: RP11-144H23" FT mRNA complement(join(27640293..27643521,AL158062.22:1717..1795, FT AL158062.22:5837..6034,AL158062.22:20529..20612, FT AL158062.22:20728..20804,AL158062.22:26247..26476, FT AL158062.22:36377..36590,AL158062.22:47162..47242, FT AL158062.22:102238..102542)) FT /gene="USP12" FT /locus_tag="RP11-667B21.1-001" FT /product="ubiquitin specific protease 12" FT /note="match: cDNAs: Em:AF022789 Em:AF022792 Em:AF441835 FT Em:AK006739 Em:AK022614 Em:AL049221 Em:BC026072" FT /note="match: ESTs: Em:AA013513 Em:AA014084 Em:AA210876 FT Em:AA347260 Em:AA412636 Em:AA453343 Em:AA858867 Em:AA867196 FT Em:AA893125 Em:AI058795 Em:AI059973 Em:AI073532 Em:AI086515 FT Em:AI265136 Em:AI639241 Em:AI681694 Em:AI742561 Em:AI820101 FT Em:AI892143 Em:AJ003625 Em:AJ397136 Em:AJ452388 Em:AJ454420 FT Em:AJ455925 Em:AL135384 Em:AL526183 Em:AL529085 Em:AL562663 FT Em:AL563335 Em:AL698720 Em:AL700166 Em:AV715654 Em:AW364030 FT Em:AW379045 Em:AW430134 Em:AW501808 Em:AW503248 Em:AW503475 FT Em:AW822773 Em:AW836793 Em:AW953075 Em:AW978732 Em:AW998502 FT Em:AW998519 Em:BB446460 Em:BB727665 Em:BB730626 Em:BB817643 FT Em:BE003494 Em:BE003578 Em:BE115885 Em:BE349295 Em:BE507670 FT Em:BE646993 Em:BE778686 Em:BE856636 Em:BE869010 Em:BE891222 FT Em:BF028623 Em:BF041776 Em:BF046289 Em:BF081354 Em:BF380765 FT Em:BF389599 Em:BF411273 Em:BF467004 Em:BF713158 Em:BF952171 FT Em:BF957314 Em:BF957517 Em:BF959218 Em:BF959888 Em:BF960612 FT Em:BF984548 Em:BG024153 Em:BG024978 Em:BG026747 Em:BG058555 FT Em:BG110747 Em:BG144478 Em:BG288511 Em:BG298812 Em:BG391297 FT Em:BG534961 Em:BG562704 Em:BG620663 Em:BG661213 Em:BG674485 FT Em:BG722192 Em:BI182718 Em:BI184743 Em:BI220807 Em:BI463895 FT Em:BI524158 Em:BI556971 Em:BI558267 Em:BI660048 Em:BI662028 FT Em:BI668157 Em:BI691428 Em:BI753295 Em:BI757327 Em:BI758842 FT Em:BJ043307 Em:BJ072494 Em:BM021108 Em:BM021355 Em:BM023161 FT Em:BM365218 Em:BM684696 Em:BM799746 Em:BM803688 Em:BM923673 FT Em:BM930847 Em:BM936575 Em:BM946882 Em:BM946915 Em:BQ179867 FT Em:BQ227792 Em:BQ268210 Em:BQ423121 Em:BQ446224 Em:BQ448253 FT Em:BQ575351 Em:C05865 Em:C06272 Em:D83868 Em:H97566 FT Em:N26045 Em:N72916 Em:N93303 Em:W39452" FT CDS complement(join(27643420..27643521,AL158062.22:1717..1795, FT AL158062.22:5837..6034,AL158062.22:20529..20612, FT AL158062.22:20728..20804,AL158062.22:26247..26476, FT AL158062.22:36377..36590,AL158062.22:47162..47242, FT AL158062.22:102238..102285)) FT /gene="USP12" FT /locus_tag="RP11-667B21.1-001" FT /standard_name="OTTHUMP00000018161" FT /product="ubiquitin specific protease 12" FT /note="match: proteins: Sw:O75317.2 Sw:P62069.1 FT Sw:Q9D9M2.2" FT /protein_id="CAI16331.1" FT /translation="MEILMTVSKFASICTMGANASALEKEIGPEQFPVNEHYFGLVNFG FT NTCYCNSVLQALYFCRPFREKVLAYKSQPRKKESLLTCLADLFHSIATQKKKVGVIPPK FT KFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDNENN FT NSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNT FT ETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFP FT LELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID FT AQAIEEFYGLTSDISKNSESGYILFYQSRD" FT misc_feature 27643592..27749371 FT /note="annotated region of clone" FT misc_feature 27723652..27723762 FT /note="Sequence from clone PCR only" FT mRNA join(27736992..27737060,27743074..27743272) FT /locus_tag="RP11-144H23.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI204583" FT misc_feature 27745383..27746003 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(AL355473.20:38320..41548, FT 27645208..27645286,27649328..27649525,27664020..27664103, FT 27664219..27664295,27669738..27669967,27679868..27680081, FT 27690653..27690733,27745729..27746033)) FT /gene="USP12" FT /locus_tag="RP11-667B21.1-001" FT /product="ubiquitin specific protease 12" FT /note="match: cDNAs: Em:AF022789 Em:AF022792 Em:AF441835 FT Em:AK006739 Em:AK022614 Em:AL049221 Em:BC026072" FT /note="match: ESTs: Em:AA013513 Em:AA014084 Em:AA210876 FT Em:AA347260 Em:AA412636 Em:AA453343 Em:AA858867 Em:AA867196 FT Em:AA893125 Em:AI058795 Em:AI059973 Em:AI073532 Em:AI086515 FT Em:AI265136 Em:AI639241 Em:AI681694 Em:AI742561 Em:AI820101 FT Em:AI892143 Em:AJ003625 Em:AJ397136 Em:AJ452388 Em:AJ454420 FT Em:AJ455925 Em:AL135384 Em:AL526183 Em:AL529085 Em:AL562663 FT Em:AL563335 Em:AL698720 Em:AL700166 Em:AV715654 Em:AW364030 FT Em:AW379045 Em:AW430134 Em:AW501808 Em:AW503248 Em:AW503475 FT Em:AW822773 Em:AW836793 Em:AW953075 Em:AW978732 Em:AW998502 FT Em:AW998519 Em:BB446460 Em:BB727665 Em:BB730626 Em:BB817643 FT Em:BE003494 Em:BE003578 Em:BE115885 Em:BE349295 Em:BE507670 FT Em:BE646993 Em:BE778686 Em:BE856636 Em:BE869010 Em:BE891222 FT Em:BF028623 Em:BF041776 Em:BF046289 Em:BF081354 Em:BF380765 FT Em:BF389599 Em:BF411273 Em:BF467004 Em:BF713158 Em:BF952171 FT Em:BF957314 Em:BF957517 Em:BF959218 Em:BF959888 Em:BF960612 FT Em:BF984548 Em:BG024153 Em:BG024978 Em:BG026747 Em:BG058555 FT Em:BG110747 Em:BG144478 Em:BG288511 Em:BG298812 Em:BG391297 FT Em:BG534961 Em:BG562704 Em:BG620663 Em:BG661213 Em:BG674485 FT Em:BG722192 Em:BI182718 Em:BI184743 Em:BI220807 Em:BI463895 FT Em:BI524158 Em:BI556971 Em:BI558267 Em:BI660048 Em:BI662028 FT Em:BI668157 Em:BI691428 Em:BI753295 Em:BI757327 Em:BI758842 FT Em:BJ043307 Em:BJ072494 Em:BM021108 Em:BM021355 Em:BM023161 FT Em:BM365218 Em:BM684696 Em:BM799746 Em:BM803688 Em:BM923673 FT Em:BM930847 Em:BM936575 Em:BM946882 Em:BM946915 Em:BQ179867 FT Em:BQ227792 Em:BQ268210 Em:BQ423121 Em:BQ446224 Em:BQ448253 FT Em:BQ575351 Em:C05865 Em:C06272 Em:D83868 Em:H97566 FT Em:N26045 Em:N72916 Em:N93303 Em:W39452" FT CDS complement(join(AL355473.20:41447..41548, FT 27645208..27645286,27649328..27649525,27664020..27664103, FT 27664219..27664295,27669738..27669967,27679868..27680081, FT 27690653..27690733,27745729..27745776)) FT /gene="USP12" FT /locus_tag="RP11-667B21.1-001" FT /standard_name="OTTHUMP00000018161" FT /product="ubiquitin specific protease 12" FT /note="match: proteins: Sw:O75317.2 Sw:P62069.1 FT Sw:Q9D9M2.2" FT /protein_id="CAH70555.1" FT /translation="MEILMTVSKFASICTMGANASALEKEIGPEQFPVNEHYFGLVNFG FT NTCYCNSVLQALYFCRPFREKVLAYKSQPRKKESLLTCLADLFHSIATQKKKVGVIPPK FT KFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDNENN FT NSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNT FT ETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFP FT LELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKID FT AQAIEEFYGLTSDISKNSESGYILFYQSRD" FT mRNA join(27746396..27746509,AL159977.10:9600..9764) FT /locus_tag="RP11-428O18.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW449459" FT misc_feature 27747272 FT /note="Clone_left_end: RP11-428O18" FT misc_feature 27747277 FT /note="Clone_right_end: RP11-667B21" FT misc_feature 27749372..27921336 FT /note="annotated region of clone" FT misc_feature 27797020 FT /note="Clone_right_end: RP11-144H23" FT mRNA complement(join(27810419..27810724,27810835..27810948)) FT /locus_tag="RP11-428O18.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI051530" FT misc_feature 27824642 FT /note="Clone_left_end: RP11-89J10" FT mRNA join(27825446..27825722,27827902..27827980, FT 27828357..27828418,27829379..27829491,27830321..27830471, FT 27830573..27830705) FT /gene="RPL21" FT /locus_tag="RP11-428O18.5-001" FT /product="ribosomal protein L21" FT /note="match: ESTs: Em:BG776769.1 Em:BM562823.1" FT /note="match: cDNAs: Em:BC001603.1 Em:BC062981.1 FT Em:BC070184.1 Em:BC070323.1 Em:BC071902.1" FT mRNA join(27825499..27825722,27827902..27827980, FT 27828357..27828604) FT /gene="RPL21" FT /locus_tag="RP11-428O18.5-002" FT /product="ribosomal protein L21" FT /note="match: ESTs: Em:BM787317" FT mRNA join(27825698..27825722,27827902..27827980, FT 27828357..27828418,27829379..27829486,27830321..27830471, FT 27830573..27830828) FT /gene="RPL21" FT /locus_tag="RP11-428O18.5-007" FT /product="ribosomal protein L21" FT /note="match: ESTs: Em:AL706172 Em:AL706183 Em:AW363853 FT Em:AW835739 Em:BG877869 Em:BG877871" FT mRNA join(27825716..27825793,27827902..27827980, FT 27828357..27828418,27829379..27829491,27830321..27830471, FT 27830573..27830705) FT /gene="RPL21" FT /locus_tag="RP11-428O18.5-003" FT /product="ribosomal protein L21" FT /note="match: ESTs: Em:AV740466 Em:BF240839" FT mRNA join(27825720..27825987,27827902..27827980, FT 27828357..27828418,27829379..27829491,27830321..27830471, FT 27830573..27830705) FT /gene="RPL21" FT /locus_tag="RP11-428O18.5-004" FT /product="ribosomal protein L21" FT /note="match: ESTs: Em:BF663139 Em:BG252672 Em:BG715198 FT Em:BM475399" FT mRNA join(27825734..27825836,27827902..27827980, FT 27828357..27828418,27829379..27829491,27830321..27830471, FT 27830573..27830705) FT /gene="RPL21" FT /locus_tag="RP11-428O18.5-005" FT /product="ribosomal protein L21" FT /note="match: ESTs: Em:BG562835 Em:BM423766 Em:BM550581 FT Em:BM555896 Em:BM559809 Em:BM912408" FT mRNA join(27827842..27827980,27828357..27828418, FT 27829379..27829491,27830321..27830444) FT /gene="RPL21" FT /locus_tag="RP11-428O18.5-009" FT /product="ribosomal protein L21" FT /note="match: ESTs: Em:AI640377" FT mRNA join(27827902..27827980,27828357..27828418, FT 27829379..27829993) FT /gene="RPL21" FT /locus_tag="RP11-428O18.5-006" FT /product="ribosomal protein L21" FT /note="match: ESTs: Em:BG428272" FT mRNA join(27827902..27827980,27829379..27829491, FT 27830321..27830471,27830573..27830682) FT /gene="RPL21" FT /locus_tag="RP11-428O18.5-008" FT /product="ribosomal protein L21" FT /note="match: ESTs: Em:BE737592" FT CDS join(27827914..27827980,27828357..27828418, FT 27829379..27829491,27830321..27830471,27830573..27830662) FT /gene="RPL21" FT /locus_tag="RP11-428O18.5-001" FT /standard_name="OTTHUMP00000018163" FT /product="ribosomal protein L21" FT /note="match: proteins: Sw:O09167.2 Sw:P20280.2 Sw:P46778.1 FT Tr:Q4VA28.1 Tr:Q6GP41.1 Tr:Q6IAX2.1 Tr:Q6PDW2.1 Tr:Q861S4.1 FT Tr:Q9CQM8.1" FT /protein_id="CAH73745.1" FT /translation="MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGM FT GTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDS FT FLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA" FT mRNA join(27829081..27829491,27830321..27830471, FT 27830573..27830685) FT /gene="RPL21" FT /locus_tag="RP11-428O18.5-010" FT /product="ribosomal protein L21" FT /note="match: ESTs: Em:BE695870 Em:BM927538" FT polyA_signal 27830680..27830685 FT polyA_site 27830705 FT mRNA join(27844464..27845205,27845621..27845677, FT 27845776..27845855,27847164..27847827) FT /gene="RASL11A" FT /locus_tag="RP11-428O18.2-001" FT /product="RAS-like, family 11, member A" FT /note="match: ESTs: Em:CA421903.1" FT /note="match: cDNAs: Em:AY439004.1" FT CDS join(27845082..27845205,27845621..27845677, FT 27845776..27845855,27847164..27847631) FT /gene="RASL11A" FT /locus_tag="RP11-428O18.2-001" FT /standard_name="OTTHUMP00000018162" FT /product="RAS-like, family 11, member A" FT /note="match: proteins: Tr:Q6IMB1.1 Tr:Q6T310.1" FT /protein_id="CAH73746.1" FT /translation="MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIV FT RFLTKRFIGDYEPNTGKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQ FT WAEGFLLVYSITDYDSYLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGI FT QLANELGSLFLEISTSENYEDVCDVFQHLCKEVSKMHGLSGERRRASIIPRPRSPNMQD FT LKRRFKQALSPKVKAPSALG" FT mRNA join(27845314..27845341,27845621..27845677, FT 27845776..27845855,27847164..27847413) FT /gene="RASL11A" FT /locus_tag="RP11-428O18.2-002" FT /product="RAS-like, family 11, member A" FT /note="match: ESTs: Em:BM846104" FT mRNA join(27845723..27845855,27847164..27847537) FT /gene="RASL11A" FT /locus_tag="RP11-428O18.2-003" FT /product="RAS-like, family 11, member A" FT /note="match: ESTs: Em:BE863027" FT polyA_signal 27847796..27847801 FT polyA_site 27847826 FT mRNA join(AL158062.22:102905..103018,27756971..27757135) FT /locus_tag="RP11-428O18.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW449459" FT misc_feature 27919336 FT /note="Clone_right_end: RP11-428O18" FT misc_feature 27945791 FT /note="Clone_left_end: RP11-125I23" FT misc_feature complement(27945991..28112031) FT /note="annotated region of clone" FT misc_feature complement(28045164) FT /note="Clone_left_end: RP11-89J10" FT mRNA complement(join(28011287..28011410,28014126..28014586, FT 28015154..28015214,28019225..28019293,28024646..28024728)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-001" FT /product="mitochondrial translational initiation factor 3" FT /note="match: ESTs: Em:BI460170" FT mRNA complement(join(28011382..28011410,28014126..28014288, FT 28014343..28014586,28019225..28019274,28024646..28024724)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-002" FT /product="mitochondrial translational initiation factor 3" FT /note="match: ESTs: Em:AV715123" FT mRNA complement(join(28009780..28010030,28011253..28011410, FT 28014126..28014586,28019225..28019293,28024646..28024711)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-011" FT /product="mitochondrial translational initiation factor 3" FT mRNA complement(join(28009780..28010030,28011253..28011410, FT 28014126..28014586,28015154..28015214,28019225..28019274, FT 28023989..28024055,28024646..28024701)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-010" FT /product="mitochondrial translational initiation factor 3" FT /note="match: ESTs: Em:AV716512 Em:BM985154" FT /note="match: cDNAs: Em:AF265440 Em:AF410851" FT mRNA complement(join(28014418..28014586,28019225..28019293, FT 28024279..28024336)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-007" FT /product="mitochondrial translational initiation factor 3" FT /note="match: ESTs: Em:AV737990" FT mRNA complement(join(28011253..28011410,28014126..28014586, FT 28015154..28015214,28019225..28019274,28024279..28024333)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-003" FT /product="mitochondrial translational initiation factor 3" FT /note="match: ESTs: Em:BG547989" FT mRNA complement(join(28011282..28011410,28014126..28014586, FT 28019225..28019293,28024201..28024301)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-004" FT /product="mitochondrial translational initiation factor 3" FT /note="match: ESTs: Em:AA362800 Em:AW954667 Em:BG720809 FT Em:BM565096 Em:N56848 Em:R74597 Em:T86558" FT mRNA complement(join(28011406..28011410,28014126..28014586, FT 28019225..28019293,28023989..28024055,28024201..28024280)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-005" FT /product="mitochondrial translational initiation factor 3" FT /note="match: ESTs: Em:BI559968" FT mRNA complement(join(28009821..28010030,28011253..28011410, FT 28014126..28014586,28019225..28019274,28024201..28024268)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-006" FT /product="mitochondrial translational initiation factor 3" FT /note="match: ESTs: Em:BQ276475" FT mRNA complement(join(28011254..28011410,28014126..28014586, FT 28019225..28019293,28023989..28024178)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-008" FT /product="mitochondrial translational initiation factor 3" FT /note="match: ESTs: Em:AI806458 Em:BG720218 Em:BI462840 FT Em:BI465099 Em:BI669258" FT mRNA complement(join(28014413..28014586,28015154..28015382)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-009" FT /product="mitochondrial translational initiation factor 3" FT /note="match: ESTs: Em:BM764690" FT CDS complement(join(28009812..28010030,28011253..28011410, FT 28014126..28014585)) FT /gene="RP11-125I23.1" FT /locus_tag="RP11-125I23.1-010" FT /standard_name="OTTHUMP00000018168" FT /product="mitochondrial translational initiation factor 3" FT /note="match: proteins: Tr:Q9CZD5 Tr:Q9H2K0" FT /protein_id="CAH70316.1" FT /translation="MAALFLKRLTLQTVKSENSCIRCFGKHILQKTAPAQLSPIASAPR FT LSFLIHAKAFSTAEDTQNEGKKTKKNKTAFSNVGRKISQRVIHLFDEKGNDLGNMHRAN FT VIRLMDERDLRLVQRNTSTEPAEYQLMTGLQILQERQRLREMEKANPKTGPTLRKELIL FT SSNIGQHDLDTKTKQIQQWIKKKHLVQITIKKGKNVDVSENEMEEIFHQILQTMPGIAT FT FSSRPQAVQGGKALMCVLRAFSKNEEKAYKETQETQERDTLNKDHGNDKESNVLHQ" FT polyA_site 28009832 FT polyA_site 28009825 FT polyA_signal 28009805..28009810 FT polyA_signal complement(28009802..28009807) FT polyA_site complement(28009780) FT mRNA join(28008794..28009171,28009270..28009329, FT 28009570..28009958) FT /gene="GTF3A" FT /locus_tag="RP11-125I23.2-009" FT /product="general transcription factor IIIA" FT /note="match: ESTs: Em:AU144480 Em:BG537269" FT mRNA join(28004095..28004103,28004670..28004758, FT 28006868..28006941,28008276..28008356,28009113..28009171, FT 28009270..28009329,28009570..28009825) FT /gene="GTF3A" FT /locus_tag="RP11-125I23.2-010" FT /product="general transcription factor IIIA" FT /note="match: ESTs: Em:BM734864" FT CDS join(<28004095..28004103,28004670..28004758, FT 28006868..28006941,28008276..28008356,28009113..28009171, FT 28009270..28009329,28009570..28009734) FT /codon_start=1 FT /gene="GTF3A" FT /locus_tag="RP11-125I23.2-010" FT /standard_name="OTTHUMP00000200771" FT /product="general transcription factor IIIA" FT /protein_id="CAX15100.1" FT /translation="QYICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFAS FT PSKLKRHAKAHEGYVCQKGCSFVAKTWTELLKHVRETHKEESRPFVCEHAGCGKTFAMK FT QSLTRHAVVHDPDKKKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNC FT VEDKMLSTVAVLTLG" FT mRNA join(28003350..28003526,28004007..28004103, FT 28004670..28004758,28006868..28006941,28008276..28008356, FT 28008942..28009171) FT /gene="GTF3A" FT /locus_tag="RP11-125I23.2-008" FT /product="general transcription factor IIIA" FT /note="match: ESTs: Em:AW361687.1 Em:BF059084.1" FT mRNA join(27999548..28000478,28001229..28001329, FT 28004007..28004103,28004670..28004758,28006868..28006941, FT 28008276..28008356,28008942..28009171,28009270..28009329, FT 28009570..28009825) FT /gene="GTF3A" FT /locus_tag="RP11-125I23.2-003" FT /product="general transcription factor IIIA" FT /note="match: cDNAs: Em:AK057993" FT mRNA join(27998813..27999302,28001229..28001329, FT 28004007..28004103,28004670..28004758,28006868..28006882) FT /gene="GTF3A" FT /locus_tag="RP11-125I23.2-005" FT /product="general transcription factor IIIA" FT /note="match: ESTs: Em:BE733517" FT mRNA join(27998681..27999075,28001229..28001329, FT 28004007..28004103,28004670..28004758,28006868..28006941, FT 28008276..28008356,28008942..28009171,28009270..28009329, FT 28009570..28009825) FT /gene="GTF3A" FT /locus_tag="RP11-125I23.2-001" FT /product="general transcription factor IIIA" FT /note="match: cDNAs: Em:CR596081.1 Em:CR603004.1 FT Em:CR612806.1 Em:D32257.1" FT /note="match: ESTs: Em:BP254755.1 Em:BQ000123.1 FT Em:BU622969.1 Em:BU743309.1" FT CDS join(27998875..27999075,28001229..28001329, FT 28004007..28004103,28004670..28004758,28006868..28006941, FT 28008276..28008356,28008942..28009171,28009270..28009329, FT 28009570..28009734) FT /gene="GTF3A" FT /locus_tag="RP11-125I23.2-001" FT /standard_name="OTTHUMP00000200767" FT /product="general transcription factor IIIA" FT /note="match: proteins: Sw:P17842.1 Sw:P34694.1 FT Sw:P34695.1" FT /protein_id="CAX15101.1" FT /translation="MDPPAVVAESVSSLTIADAFIAAGESSAPTPPRPALPRRFICSFP FT DCSANYSKAWKLDAHLCKHTGERPFVCDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAA FT NGCDQKFNTKSNLKKHFERKHENQQKQYICSFEDCKKTFKKHQQLKIHQCQHTNEPLFK FT CTQEGCGKHFASPSKLKRHAKAHEGYVCQKGCSFVAKTWTELLKHVRETHKEEILCEVC FT RKTFKRKDYLKQHMKTHAPERDVCRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEH FT AGCGKTFAMKQSLTRHAVVHDPDKKKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLS FT LCQNGESPNCVEDKMLSTVAVLTLG" FT mRNA join(27998799..27999075,28001229..28001329, FT 28004007..28004103,28004670..28004758,28008276..28008356, FT 28008942..28009171,28009270..28009329,28009570..28009825) FT /gene="GTF3A" FT /locus_tag="RP11-125I23.2-002" FT /product="general transcription factor IIIA" FT /note="match: cDNAs: Em:U14134" FT /note="match: ESTs: Em:AA083438 Em:AL527492 Em:AL527493 FT Em:BE887196 Em:BG505888 Em:BG707396 Em:BI914466 Em:BM874571 FT Em:BM909754" FT mRNA join(27998775..27999075,28001229..28001329, FT 28004007..28004103,28004675..28004758,28006868..28006941, FT 28008276..28008306) FT /gene="GTF3A" FT /locus_tag="RP11-125I23.2-004" FT /product="general transcription factor IIIA" FT /note="match: ESTs: Em:BE905944" FT mRNA join(27998903..27998990,28001229..28001329, FT 28004007..28004103,28004670..28004758,28006868..28006941, FT 28008276..28008287) FT /gene="GTF3A" FT /locus_tag="RP11-125I23.2-006" FT /product="general transcription factor IIIA" FT /note="match: ESTs: Em:BM717841" FT misc_feature complement(27986024) FT /note="Clone_right_end: RP11-400I20" FT misc_feature complement(27963131..27963181) FT /note="Assembly confirmed by restriction digest.Sequence FT from overlapping clone bA400I20(AL138699)" FT misc_feature complement(27963130) FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 225bp by restriction digest data" FT mRNA join(27947485..27947691,27948131..27948503) FT /locus_tag="RP11-125I23.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI715219 Em:BM503984" FT misc_feature complement(27945991) FT /note="Clone_left_end: RP11-125I23" FT misc_feature 28112032..28174798 FT /note="annotated region of clone" FT polyA_site complement(28120048) FT polyA_site complement(28120050) FT polyA_site complement(28120054) FT polyA_signal complement(28120067..28120072) FT mRNA complement(join(28120050..28122607,28124470..28124628, FT 28127345..28127576,28130373..28130550,28133979..28134122, FT 28136550..28136918,28141777..28141976,28143166..28143413, FT 28155434..28155940,AL136439.19:19814..19843)) FT /gene="LNX2" FT /locus_tag="RP11-400I20.1-001" FT /product="ligand of numb-protein X 2" FT /note="match: cDNAs: Em:BC036755.2" FT CDS complement(join(28122472..28122607,28124470..28124628, FT 28127345..28127576,28130373..28130550,28133979..28134122, FT 28136550..28136918,28141777..28141976,28143166..28143413, FT 28155434..28155840)) FT /gene="LNX2" FT /locus_tag="RP11-400I20.1-001" FT /standard_name="OTTHUMP00000018170" FT /product="ligand of numb-protein X 2" FT /note="match: proteins: Sw:Q8N448.1" FT /protein_id="CAH73446.1" FT /translation="MGTTSDEMVSVEQTSSSSLNPLCFECGQQHWTRENHLYNYQNEVD FT DDLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSILVH FT KLLDKLLVLCPFSSVCKDVMQRCDLEAHLKNRCPGASHRRVALERRKTSRTQAEIENEN FT GPTLLDPAGTLSPEADCLGTGAVPVERHLTSASLSTWSEEPGLDNPAFEESAGADTTQQ FT PLSLPEGEITTIEIHRSNPYIQLGISIVGGNETPLINIVIQEVYRDGVIARDGRLLAGD FT QILQVNNYNISNVSHNYARAVLSQPCNTLHLTVLRERRFGNRAHNHSDSNSPREEIFQV FT ALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGT FT PELAAQIIQASGERVNLTIARPGKPQPGNTIREAGNHSSSSQHHTPPPYYSRPSSHKDL FT TQCVTCQEKHITVKKEPHESLGMTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGD FT VLLNINGIDLTNLSHSEAVAMLKASAASPAVALKALEVQIVEEATQNAEEQPSTFSENE FT YDASWSPSWVMWLGLPSTLHSCHDIVLRRSYLGSWGFSIVGGYEENHTNQPFFIKTIVL FT GTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQRNKVTLTVICWPGSLV" FT misc_feature 28174599 FT /note="Clone_left_end: RP11-129M14" FT misc_feature 28174799..28286902 FT /note="annotated region of clone" FT misc_feature 28176277..28176583 FT /note="Sequence from overlapping clone bA400I20 (AL138699). FT Assembly confirmed by restriction digest" FT misc_feature 28176584..28176624 FT /note="Sequence from overlapping clone bA400I20 (AL138699). FT Assembly confirmed by restriction digest" FT misc_feature 28176625..28176653 FT /note="Sequence from overlapping clone bA400I20 (AL138699). FT Assembly confirmed by restriction digest" FT misc_feature 28176654..28176659 FT /note="Sequence from overlapping clone bA400I20 (AL138699). FT Assembly confirmed by restriction digest" FT misc_feature 28176661..28176681 FT /note="Sequence from overlapping clone bA400I20 (AL138699). FT Assembly confirmed by restriction digest" FT misc_feature 28176683..28176693 FT /note="Sequence from overlapping clone bA400I20 (AL138699). FT Assembly confirmed by restriction digest" FT mRNA complement(join(AL138699.10:8119..10676, FT AL138699.10:12539..12697,AL138699.10:15414..15645, FT AL138699.10:18442..18619,AL138699.10:22048..22191, FT AL138699.10:24619..24987,AL138699.10:29846..30045, FT AL138699.10:31235..31482,AL138699.10:43503..44009, FT 28194512..28194541)) FT /gene="LNX2" FT /locus_tag="RP11-400I20.1-001" FT /product="ligand of numb-protein X 2" FT /note="match: cDNAs: Em:BC036755.2" FT mRNA join(28194903..28195277,28195474..28196146, FT 28197012..28197589) FT /gene="POLR1D" FT /locus_tag="RP11-87C7.1-003" FT /product="polymerase (RNA) I polypeptide D, 16kDa" FT /note="match: cDNAs: Em:AF077044.1 Em:AK000623.1 FT Em:BC000889.1 Em:CR607657.1" FT mRNA join(28196003..28196146,28222516..28222590, FT 28239823..28241548) FT /gene="POLR1D" FT /locus_tag="RP11-87C7.1-004" FT /product="polymerase (RNA) I polypeptide D, 16kDa" FT /note="match: cDNAs: Em:BC006972.1 Em:BC015319.2 FT Em:BC018528.1" FT mRNA join(28196012..28196146,28222516..28222586, FT 28239823..28241547) FT /gene="POLR1D" FT /locus_tag="RP11-87C7.1-005" FT /product="polymerase (RNA) I polypeptide D, 16kDa" FT /note="match: ESTs: Em:BF031869" FT /note="match: cDNAs: Em:BC006972" FT mRNA join(28196023..28196146,28222516..28222590, FT 28224179..28224846) FT /gene="POLR1D" FT /locus_tag="RP11-87C7.1-001" FT /product="polymerase (RNA) I polypeptide D, 16kDa" FT /note="match: ESTs: Em:BM811602" FT CDS join(28196121..28196146,28197012..28197387) FT /gene="POLR1D" FT /locus_tag="RP11-87C7.1-003" FT /standard_name="OTTHUMP00000018171" FT /product="polymerase (RNA) I polypeptide D, 16kDa" FT /note="match: proteins: Sw:P97304.1 Sw:Q9Y2S0.1 FT Tr:Q545W2.1" FT /protein_id="CAI16933.1" FT /translation="MEEDQELERKISGLKTSMAEGERKTALEMVQAAGTDRHCVTFVLH FT EEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSESKINLRIQTRGTLPAVEPFQRGLNELM FT NVCQHVLDKFEASIKDYKDQKASRNESTF" FT CDS join(28196121..28196146,28222516..28222590, FT 28239823..28240090) FT /gene="POLR1D" FT /locus_tag="RP11-87C7.1-004" FT /standard_name="OTTHUMP00000018172" FT /product="polymerase (RNA) I polypeptide D, 16kDa" FT /note="match: proteins: Tr:Q2YDK5.1 Tr:Q4G058.1 FT Tr:Q96BR3.1" FT /protein_id="CAI16934.1" FT /translation="MEEDQELERKAIEELLKEAKRGKTRAETMGPMGWMKCPLASTNKR FT FLINTIKNTLPSHKEQDHEQKEGDKEPAKSQAQKEENPKKHRSHPYKHSFRARGSASYS FT PPRKRSSQDKYEKRSNRR" FT polyA_signal 28197563..28197568 FT polyA_site 28197586 FT polyA_site 28197589 FT mRNA join(28222147..28222590,28239823..28239890) FT /gene="POLR1D" FT /locus_tag="RP11-87C7.1-002" FT /product="polymerase (RNA) I polypeptide D, 16kDa" FT /note="match: ESTs: Em:AL138217" FT misc_feature 28239535 FT /note="Clone_right_end: RP11-400I20" FT polyA_signal 28241529..28241534 FT polyA_site 28241548 FT polyA_site 28241552 FT polyA_signal complement(28270230..28270235) FT CDS complement(28270530..28271341) FT /pseudo FT /locus_tag="RP11-87C7.2-001" FT /product="nucleophosmin (nucleolar phosphoprotein B23, FT numatrin) (NPM1) pseudogene" FT /note="match: proteins: Sw:O42584 Sw:O75607 Sw:P06748 FT Sw:P13084 Sw:Q61937 Sw:Q9CPP0 Tr:Q91802 Tr:Q9BTI9 FT Tr:Q9NX34" FT misc_feature 28286703 FT /note="Clone_left_end: RP11-438F9" FT misc_feature 28286903..28487635 FT /note="annotated region of clone" FT mRNA join(28366780..28367239,28367703..28368089) FT /gene="GSH1" FT /locus_tag="RP11-438F9.1-001" FT /product="GS homeobox 1" FT /note="match: cDNAs: Em:AB044157.1" FT CDS join(28366828..28367239,28367703..28368085) FT /gene="GSH1" FT /locus_tag="RP11-438F9.1-001" FT /standard_name="OTTHUMP00000018173" FT /product="GS homeobox 1" FT /note="match: proteins: Sw:Q9H4S2.1" FT /protein_id="CAC12721.1" FT /translation="MPRSFLVDSLVLREAGEKKAPEGSPPPLFPYAVPPPHALHGLSPG FT ACHARKAGLLCVCPLCVTASQLHGPPGPPALPLLKASFPPFGSQYCHAPLGRQHSAVSP FT GVAHGPAAAAAAAALYQTSYPLPDPRQFHCISVDSSSNQLPSSKRMRTAFTSTQLLELE FT REFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGSNHRGGGGGGAGGG FT GSAPQGCKCASLSSAKCSEDDDELPMSPSSSGKDDRDLTVTP" FT misc_feature 28381716 FT /note="Clone_right_end: RP11-87C7" FT misc_feature 28382456 FT /note="Clone_left_end: RP11-328P22" FT misc_feature 28487535 FT /note="Clone_right_end: RP11-438F9" FT misc_feature 28487636..28518161 FT /note="annotated region of clone" FT mRNA join(28494157..28494681,28498393..28499394) FT /gene="PDX1" FT /locus_tag="RP11-328P22.1-001" FT /product="pancreatic and duodenal homeobox 1" FT /note="match: cDNAs: Em:BC111592.1 Em:U30329.1 Em:U35632.1 FT Em:X99894.1" FT CDS join(28494276..28494681,28498393..28498838) FT /gene="PDX1" FT /locus_tag="RP11-328P22.1-001" FT /standard_name="OTTHUMP00000018174" FT /product="pancreatic and duodenal homeobox 1" FT /note="match: proteins: Sw:P52945.1 Sw:P52947.1 Sw:P70118.1 FT Tr:Q5VYW2.1" FT /protein_id="CAH72544.1" FT /translation="MNGEEQYYAATQLYKDPCAFQRGPAPEFSASPPACLYMGRQPPPP FT PPHPFPGALGALEQGSPPDISPYEVPPLADDPAVAHLHHHLPAQLALPHPPAGPFPEGA FT EPGVLEEPNRVQLPFPWMKSTKAHAWKGQWAGGAYAAEPEENKRTRTAYTRAQLLELEK FT EFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEEDKKRGGGTAVGGGGVAE FT PEQDCAVTSGEELLALPPPPPPGGAVPPAAPVAAREGRLPPGLSASPQPSSVAPRRPQE FT PR" FT misc_feature 28507216 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 320bp by restriction digest data" FT misc_feature 28514162 FT /note="Clone_left_end: RP11-153M24" FT misc_feature 28518162..28592882 FT /note="annotated region of clone" FT mRNA 28519343..28519727 FT /locus_tag="RP11-153M24.1-001" FT /product="novel protein similar to ATP synthase (H+ FT transporting, mitochondrial F1 complex, epsilon subunit)" FT /note="match: ESTs: Em:AA308273 Em:AV694674 Em:AV706459 FT Em:AV713770 Em:AV756013 Em:BF244539 Em:BG341981 Em:BG621912 FT Em:BG777220 Em:BI835250 Em:BM822062 Em:W68503 Em:W80646" FT /note="match: cDNAs: Em:AF052955 Em:AF077045 Em:AK026556 FT Em:BC001690 Em:BC003671 Em:X16978" FT CDS 28519397..28519552 FT /locus_tag="RP11-153M24.1-001" FT /standard_name="OTTHUMP00000018178" FT /product="novel protein similar to ATP synthase (H+ FT transporting, mitochondrial F1 complex, epsilon subunit)" FT /note="match: proteins: Sw:P05632 Sw:P56381 Sw:P56382 FT Sw:P56382 Tr:Q545F5 Tr:Q545F5" FT /protein_id="CAH70632.1" FT /translation="MVAYWRQAGLSYIRYSQICAKVVRDALKTEFKANAKKTSGNSVKI FT VKVKKE" FT polyA_signal 28519684..28519689 FT polyA_site 28519727 FT misc_feature 28525932..28525996 FT /note="Sequence from overlapping clone RP11-328P22 FT (AL353195). Assembly confirmed by restriction digest" FT polyA_site complement(28536273) FT polyA_signal complement(28536291..28536296) FT mRNA complement(join(28536278..28537506,28539007..28539152, FT 28542603..28543505)) FT /gene="CDX2" FT /locus_tag="RP11-153M24.2-001" FT /product="caudal type homeobox transcription factor 2" FT /note="match: cDNAs: Em:BC014461.1 Em:Y13709.1" FT CDS complement(join(28537252..28537506,28539007..28539152, FT 28542603..28543143)) FT /gene="CDX2" FT /locus_tag="RP11-153M24.2-001" FT /standard_name="OTTHUMP00000018176" FT /product="caudal type homeobox transcription factor 2" FT /note="match: proteins: Sw:Q04649.1 Sw:Q99626.2 FT Tr:Q5VTU7.1" FT /protein_id="CAH70633.1" FT /translation="MYVSYLLDKDVSMYPSSVRHSGGLNLAPQNFVSPPQYPDYGGYHV FT AAAAAAAANLDSAQSPGPSWPAAYGAPLREDWNGYAPGGAAAAANAVAHGLNGGSPAAA FT MGYSSPADYHPHHHPHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPGGQRR FT NLCEWMRKPAQQSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAAT FT LGLSERQVKIWFQNRRAKERKINKKKLQQQQQQQPPQPPPPPPQPPQPQPGPLRSVPEP FT LSPVSSLQASVPGSVPGVLGPTGGVLNPTVTQ" FT misc_feature 28571196..28571250 FT /note="Single clone region. Assembly consistent with FT restriction digest data" FT misc_feature 28571251 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 250bp by restriction digest data" FT misc_feature 28571253..28571285 FT /note="Single clone region. Assembly consistent with FT restriction digest data" FT mRNA complement(join(28577411..28578311,28588589..28588694, FT 28589294..28589393,28589727..28589838,28592595..28592726, FT AL445262.7:6604..6731,AL445262.7:8115..8197, FT AL445262.7:10342..10495,AL445262.7:11432..11542, FT AL445262.7:17141..17245,AL445262.7:17336..17468, FT AL445262.7:17555..17661,AL445262.7:18749..18927, FT AL445262.7:19189..19297,AL445262.7:20439..20542, FT AL356915.19:8508..8676,AL356915.19:9617..9770, FT AL356915.19:9868..10007,AL356915.19:10328..10455, FT AL356915.19:12778..12907,AL356915.19:17580..17695, FT AL356915.19:22100..22302,AL356915.19:30724..30845, FT AL356915.19:60701..60825)) FT /gene="FLT3" FT /locus_tag="RP11-153M24.3-001" FT /product="fms-related tyrosine kinase 3" FT /note="match: ESTs: Em:AI187836 Em:AW057705 Em:AW772610 FT Em:BF523018 Em:BI461248 Em:BM147250 Em:BQ556177 Em:W34175" FT /note="match: cDNAs: Em:L36162 Em:U02687 Em:Z26652" FT CDS complement(join(28578189..28578311,28588589..28588694, FT 28589294..28589393,28589727..28589838,28592595..28592726, FT AL445262.7:6604..6731,AL445262.7:8115..8197, FT AL445262.7:10342..10495,AL445262.7:11432..11542, FT AL445262.7:17141..17245,AL445262.7:17336..17468, FT AL445262.7:17555..17661,AL445262.7:18749..18927, FT AL445262.7:19189..19297,AL445262.7:20439..20542, FT AL356915.19:8508..8676,AL356915.19:9617..9770, FT AL356915.19:9868..10007,AL356915.19:10328..10455, FT AL356915.19:12778..12907,AL356915.19:17580..17695, FT AL356915.19:22100..22302,AL356915.19:30724..30845, FT AL356915.19:60701..60743)) FT /gene="FLT3" FT /locus_tag="RP11-153M24.3-001" FT /standard_name="OTTHUMP00000018181" FT /product="fms-related tyrosine kinase 3" FT /note="match: proteins: Sw:P36888" FT /protein_id="CAH70634.1" FT /translation="MPALARDGGQLPLLVVFSAMIFGTITNQDLPVIKCVLINHKNNDS FT SVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCL FT WVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNT FT LLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLH FT ELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGF FT GLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSA FT LVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDN FT GYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEASASQASCFSDGYP FT LPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAY FT NSLGTSCETILLNSPGPFPFIQDNISFYATIGVCLLFIVVLTLLICHKYKKQFRYESQL FT QMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKT FT GVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYC FT CYGDLLNYLRSKREKFHRTWTEIFKEHNFSFYPTFQSHPNSSMPGSREVQIHPDSDQIS FT GLHGNSFHSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL FT AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNVRLARLPVKWMAPESLFEGIYTIK FT SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWA FT FDSRKRPSFPNLTSFLGCQLADAEEAMYQNVDGRVSECPHTYQNRRPFSREMDLGLLSP FT QAQVEDS" FT polyA_site complement(28577411) FT polyA_signal complement(28577429..28577434) FT misc_feature 28582554 FT /note="Clone_right_end: RP11-328P22" FT misc_feature 28588883 FT /note="Clone_left_end: RP11-9D14" FT misc_feature 28592883..28614004 FT /note="annotated region of clone" FT misc_feature 28611906 FT /note="Clone_left_end: RP11-179F17" FT mRNA complement(join(AL591024.14:61250..62150, FT AL591024.14:72428..72533,AL591024.14:73133..73232, FT AL591024.14:73566..73677,AL591024.14:76434..76565, FT 28597487..28597614,28598998..28599080,28601225..28601378, FT 28602315..28602425,28608024..28608128,28608219..28608351, FT 28608438..28608544,28609632..28609810,28610072..28610180, FT 28611322..28611425,AL356915.19:8508..8676, FT AL356915.19:9617..9770,AL356915.19:9868..10007, FT AL356915.19:10328..10455,AL356915.19:12778..12907, FT AL356915.19:17580..17695,AL356915.19:22100..22302, FT AL356915.19:30724..30845,AL356915.19:60701..60825)) FT /gene="FLT3" FT /locus_tag="RP11-153M24.3-001" FT /product="fms-related tyrosine kinase 3" FT /note="match: cDNAs: Em:L36162 Em:U02687 Em:Z26652" FT /note="match: ESTs: Em:AI187836 Em:AW057705 Em:AW772610 FT Em:BF523018 Em:BI461248 Em:BM147250 Em:BQ556177 Em:W34175" FT CDS complement(join(AL591024.14:62028..62150, FT AL591024.14:72428..72533,AL591024.14:73133..73232, FT AL591024.14:73566..73677,AL591024.14:76434..76565, FT 28597487..28597614,28598998..28599080,28601225..28601378, FT 28602315..28602425,28608024..28608128,28608219..28608351, FT 28608438..28608544,28609632..28609810,28610072..28610180, FT 28611322..28611425,AL356915.19:8508..8676, FT AL356915.19:9617..9770,AL356915.19:9868..10007, FT AL356915.19:10328..10455,AL356915.19:12778..12907, FT AL356915.19:17580..17695,AL356915.19:22100..22302, FT AL356915.19:30724..30845,AL356915.19:60701..60743)) FT /gene="FLT3" FT /locus_tag="RP11-153M24.3-001" FT /standard_name="OTTHUMP00000018181" FT /product="fms-related tyrosine kinase 3" FT /note="match: proteins: Sw:P36888" FT /protein_id="CAI17231.1" FT /translation="MPALARDGGQLPLLVVFSAMIFGTITNQDLPVIKCVLINHKNNDS FT SVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCL FT WVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNT FT LLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLH FT ELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGF FT GLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSA FT LVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDN FT GYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEASASQASCFSDGYP FT LPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAY FT NSLGTSCETILLNSPGPFPFIQDNISFYATIGVCLLFIVVLTLLICHKYKKQFRYESQL FT QMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKT FT GVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYC FT CYGDLLNYLRSKREKFHRTWTEIFKEHNFSFYPTFQSHPNSSMPGSREVQIHPDSDQIS FT GLHGNSFHSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL FT AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNVRLARLPVKWMAPESLFEGIYTIK FT SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWA FT FDSRKRPSFPNLTSFLGCQLADAEEAMYQNVDGRVSECPHTYQNRRPFSREMDLGLLSP FT QAQVEDS" FT misc_feature 28614005..28808424 FT /note="annotated region of clone" FT mRNA complement(join(AL591024.14:61250..62150, FT AL591024.14:72428..72533,AL591024.14:73133..73232, FT AL591024.14:73566..73677,AL591024.14:76434..76565, FT AL445262.7:6604..6731,AL445262.7:8115..8197, FT AL445262.7:10342..10495,AL445262.7:11432..11542, FT AL445262.7:17141..17245,AL445262.7:17336..17468, FT AL445262.7:17555..17661,AL445262.7:18749..18927, FT AL445262.7:19189..19297,AL445262.7:20439..20542, FT 28622412..28622580,28623521..28623674,28623772..28623911, FT 28624232..28624359,28626682..28626811,28631484..28631599, FT 28636004..28636206,28644628..28644749,28674605..28674729)) FT /gene="FLT3" FT /locus_tag="RP11-153M24.3-001" FT /product="fms-related tyrosine kinase 3" FT /note="match: cDNAs: Em:L36162 Em:U02687 Em:Z26652" FT /note="match: ESTs: Em:AI187836 Em:AW057705 Em:AW772610 FT Em:BF523018 Em:BI461248 Em:BM147250 Em:BQ556177 Em:W34175" FT CDS complement(join(AL591024.14:62028..62150, FT AL591024.14:72428..72533,AL591024.14:73133..73232, FT AL591024.14:73566..73677,AL591024.14:76434..76565, FT AL445262.7:6604..6731,AL445262.7:8115..8197, FT AL445262.7:10342..10495,AL445262.7:11432..11542, FT AL445262.7:17141..17245,AL445262.7:17336..17468, FT AL445262.7:17555..17661,AL445262.7:18749..18927, FT AL445262.7:19189..19297,AL445262.7:20439..20542, FT 28622412..28622580,28623521..28623674,28623772..28623911, FT 28624232..28624359,28626682..28626811,28631484..28631599, FT 28636004..28636206,28644628..28644749,28674605..28674647)) FT /gene="FLT3" FT /locus_tag="RP11-153M24.3-001" FT /standard_name="OTTHUMP00000018181" FT /product="fms-related tyrosine kinase 3" FT /note="match: proteins: Sw:P36888" FT /protein_id="CAI12447.1" FT /translation="MPALARDGGQLPLLVVFSAMIFGTITNQDLPVIKCVLINHKNNDS FT SVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCL FT WVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNT FT LLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLH FT ELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGF FT GLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSA FT LVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDN FT GYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEASASQASCFSDGYP FT LPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAY FT NSLGTSCETILLNSPGPFPFIQDNISFYATIGVCLLFIVVLTLLICHKYKKQFRYESQL FT QMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKT FT GVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYC FT CYGDLLNYLRSKREKFHRTWTEIFKEHNFSFYPTFQSHPNSSMPGSREVQIHPDSDQIS FT GLHGNSFHSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL FT AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNVRLARLPVKWMAPESLFEGIYTIK FT SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWA FT FDSRKRPSFPNLTSFLGCQLADAEEAMYQNVDGRVSECPHTYQNRRPFSREMDLGLLSP FT QAQVEDS" FT CDS 28681568..28682014 FT /pseudo FT /locus_tag="RP11-179F17.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q9D1L0 Sw:Q9Y6H1" FT polyA_signal 28682264..28682269 FT mRNA join(28713170..28713224,28748409..28748530, FT 28750630..28750696,28752002..28752072,28771322..28771483, FT 28794368..28794515,AL138712.19:24005..24252, FT AL138712.19:28160..28264,AL138712.19:29114..29171, FT AL138712.19:34428..34589,AL138712.19:34808..34924, FT AL138712.19:35013..35114,AL138712.19:38414..38579, FT AL138712.19:39694..39784,AL138712.19:44950..45089, FT AL138712.19:48125..48254,AL138712.19:49028..49092, FT AL138712.19:55697..55835,AL138712.19:60095..60252) FT /gene="PAN3" FT /locus_tag="RP11-179F17.3-002" FT /product="PAN3 polyA specific ribonuclease subunit homolog FT (S. cerevisiae)" FT /note="match: ESTs: Em:BI185404.1 Em:DR003408.1" FT mRNA join(28713170..28713224,28748409..28748530, FT 28750630..28750696,28752002..28752072,28794368..28794515, FT AL138712.19:24005..24252,AL138712.19:28160..28264, FT AL138712.19:29114..29171,AL138712.19:34428..34589, FT AL138712.19:34808..34924,AL138712.19:35013..35114, FT AL138712.19:38414..38579,AL138712.19:39694..39784, FT AL138712.19:44950..45089,AL138712.19:48125..48254, FT AL138712.19:49028..49092,AL138712.19:55697..55835, FT AL138712.19:60095..63048) FT /gene="PAN3" FT /locus_tag="RP11-179F17.3-001" FT /product="PAN3 polyA specific ribonuclease subunit homolog FT (S. cerevisiae)" FT /note="match: cDNAs: Em:AB107584.1" FT /note="match: ESTs: Em:BF367733.1 Em:BF367739.1 FT Em:BF367749.1" FT CDS join(28748417..28748530,28750630..28750696, FT 28752002..28752072,28794368..28794515, FT AL138712.19:24005..24252,AL138712.19:28160..28264, FT AL138712.19:29114..29171,AL138712.19:34428..34589, FT AL138712.19:34808..34924,AL138712.19:35013..35114, FT AL138712.19:38414..38579,AL138712.19:39694..39784, FT AL138712.19:44950..45089,AL138712.19:48125..48254, FT AL138712.19:49028..49092,AL138712.19:55697..55835, FT AL138712.19:60095..60235) FT /gene="PAN3" FT /locus_tag="RP11-179F17.3-001" FT /standard_name="OTTHUMP00000018179" FT /product="PAN3 polyA specific ribonuclease subunit homolog FT (S. cerevisiae)" FT /note="match: proteins: Tr:Q76E13.1" FT /protein_id="CAI12449.2" FT /translation="MDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKYPLMQRMTNSSS FT SPSLLNDSAKPYSAHDPLTSPASSLFNDFGALNISQRRKTPNPTASEFIPKGGSTSRLS FT NVSQSNMSAFSQVFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHT FT PNPASYMVPSSASTSVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYH FT IYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHS FT LFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMW FT KKIQHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNADAYFTKRKWGQ FT HEGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNC FT VGVFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELV FT TINYSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQ FT NGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHI FT ISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL" FT CDS join(28748417..28748530,28750630..28750696, FT 28752002..28752072,28771322..28771483,28794368..28794515, FT AL138712.19:24005..24252,AL138712.19:28160..28264, FT AL138712.19:29114..29171,AL138712.19:34428..34589, FT AL138712.19:34808..34924,AL138712.19:35013..35114, FT AL138712.19:38414..38579,AL138712.19:39694..39784, FT AL138712.19:44950..45089,AL138712.19:48125..48254, FT AL138712.19:49028..49092,AL138712.19:55697..55835, FT AL138712.19:60095..60235) FT /gene="PAN3" FT /locus_tag="RP11-179F17.3-002" FT /standard_name="OTTHUMP00000018180" FT /product="PAN3 polyA specific ribonuclease subunit homolog FT (S. cerevisiae)" FT /note="match: proteins: Tr:Q58A45.1" FT /protein_id="CAI12450.2" FT /translation="MDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKYPLMQRMTNSSS FT SPSLLNDSAKPYSAHDPLTSPASSLFNDFGALNISQRRKPRKYRLGMLEERLVPMGSKA FT RKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTSRLSNVSQS FT NMSAFSQVFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPAS FT YMVPSSASTSVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPT FT APHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSLFPLE FT PLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQH FT SNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNADAYFTKRKWGQHEGPL FT PRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNCVGVFD FT VLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYS FT SDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLF FT RLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLN FT KLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL" FT misc_feature 28764781 FT /note="Clone_left_end: RP11-502P18" FT misc_feature 28779536 FT /note="Clone_right_end: RP11-9D14" FT CDS 28788650..28790034 FT /pseudo FT /locus_tag="RP11-179F17.4-001" FT /product="eukaryotic translation elongation factor 1 FT alpha-like 1 pseudogene" FT /note="match: proteins: Sw:P02993 Sw:P62630 Sw:P68104 FT Sw:P68105 Tr:P10126 Tr:Q966R9 Tr:Q9NK32 Tr:Q9NK33 FT Tr:Q9NK48" FT misc_feature 28808324 FT /note="Clone_right_end: RP11-179F17" FT misc_feature 28808425..28970943 FT /note="annotated region of clone" FT mRNA join(<28813694..28814174,28830429..28830676) FT /gene="PAN3" FT /locus_tag="RP11-179F17.3-003" FT /product="PAN3 polyA specific ribonuclease subunit homolog FT (S. cerevisiae)" FT /note="match: ESTs: Em:BQ421209.1" FT misc_feature 28829381..28829940 FT /note="Sequence from clone PCR only" FT misc_feature 28832103..28832234 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT polyA_signal 28869451..28869456 FT polyA_site 28869472 FT mRNA complement(join(28874489..28877505,28880815..28880909, FT 28882980..28883064,28885727..28885869,28886130..28886235, FT 28891635..28891734,28893560..28893671,28895600..28895722, FT 28896399..28896496,28896927..28897083,28901599..28901687, FT 28903752..28903865,28908162..28908266,28913305..28913437, FT 28919582..28919688,28931691..28931822,28959022..28959168, FT 28963933..28964241,AL139005.12:254..362, FT AL139005.12:9074..9188,AL139005.12:30453..30612, FT AL139005.12:31046..31215,AL139005.12:33344..33461, FT AL139005.12:34430..34604,AL139005.12:37113..37249, FT AL139005.12:37352..37514,AL139005.12:41515..41639, FT AL139005.12:70197..70423,AL139005.12:70815..70911, FT AL139005.12:98074..98389)) FT /gene="FLT1" FT /locus_tag="RP11-502P18.1-001" FT /product="fms-related tyrosine kinase 1 (vascular FT endothelial growth factor/vascular permeability factor FT receptor)" FT /note="match: cDNAs: Em:AB209050.1 Em:AF063657.2 FT Em:X51602.1" FT CDS complement(join(28877304..28877505,28880815..28880909, FT 28882980..28883064,28885727..28885869,28886130..28886235, FT 28891635..28891734,28893560..28893671,28895600..28895722, FT 28896399..28896496,28896927..28897083,28901599..28901687, FT 28903752..28903865,28908162..28908266,28913305..28913437, FT 28919582..28919688,28931691..28931822,28959022..28959168, FT 28963933..28964241,AL139005.12:254..362, FT AL139005.12:9074..9188,AL139005.12:30453..30612, FT AL139005.12:31046..31215,AL139005.12:33344..33461, FT AL139005.12:34430..34604,AL139005.12:37113..37249, FT AL139005.12:37352..37514,AL139005.12:41515..41639, FT AL139005.12:70197..70423,AL139005.12:70815..70911, FT AL139005.12:98074..98137)) FT /gene="FLT1" FT /locus_tag="RP11-502P18.1-001" FT /standard_name="OTTHUMP00000018183" FT /product="fms-related tyrosine kinase 1 (vascular FT endothelial growth factor/vascular permeability factor FT receptor)" FT /note="match: proteins: Sw:P17948.1 Tr:Q5TAR1.1" FT /protein_id="CAI14846.1" FT /translation="MVSYWDTGVLLCALLSCLLLTGSSSGSKLKDPELSLKGTQHIMQA FT GQTLHLQCRGEAAHKWSLPEMVSKESERLSITKSACGRNGKQFCSTLTLNTAQANHTGF FT YSCKYLAVPTSKKKETESAIYIFISDTGRPFVEMYSEIPEIIHMTEGRELVIPCRVTSP FT NITVTLKKFPLDTLIPDGKRIIWDSRKGFIISNATYKEIGLLTCEATVNGHLYKTNYLT FT HRQTNTIIDVQISTPRPVKLLRGHTLVLNCTATTPLNTRVQMTWSYPDEKNKRASVRRR FT IDQSNSHANIFYSVLTIDKMQNKDKGLYTCRVRSGPSFKSVNTSVHIYDKAFITVKHRK FT QQVLETVAGKRSYRLSMKVKAFPSPEVVWLKDGLPATEKSARYLTRGYSLIIKDVTEED FT AGNYTILLSIKQSNVFKNLTATLIVNVKPQIYEKAVSSFPDPALYPLGSRQILTCTAYG FT IPQPTIKWFWHPCNHNHSEARCDFCSNNEESFILDADSNMGNRIESITQRMAIIEGKNK FT MASTLVVADSRISGIYICIASNKVGTVGRNISFYITDVPNGFHVNLEKMPTEGEDLKLS FT CTVNKFLYRDVTWILLRTVNNRTMHYSISKQKMAITKEHSITLNLTIMNVSLQDSGTYA FT CRARNVYTGEEILQKKEITIRDQEAPYLLRNLSDHTVAISSSTTLDCHANGVPEPQITW FT FKNNHKIQQEPGIILGPGSSTLFIERVTEEDEGVYHCKATNQKGSVESSAYLTVQGTSD FT KSNLELITLTCTCVAATLFWLLLTLFIRKMKRSSSEIKTDYLSIIMDPDEVPLDEQCER FT LPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASE FT YKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFL FT NKDAALHMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGF FT YKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIY FT KNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE FT DFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDLLQANVQQDG FT KDYIPINAILTGNSGFTYSTPAFSEDFFKESISAPKFNSGSSDDVRYVNAFKFMSLERI FT KTFEELLPNATSMFDDYQGDSSTLLASPMLKRFTWTDSKPKASLKIDLRVTSKSKESGL FT SDVSRPSFCHSSCGHVSEGKRRFTYDHAELERKIACCSPPPDYNSVVLYSTPPI" FT mRNA join(AL356915.19:99266..99320,AL356915.19:134505..134626, FT AL356915.19:136726..136792,AL356915.19:138098..138168, FT AL356915.19:157418..157579,AL356915.19:180464..180611, FT 28830429..28830676,28834584..28834688,28835538..28835595, FT 28840852..28841013,28841232..28841348,28841437..28841538, FT 28844838..28845003,28846118..28846208,28851374..28851513, FT 28854549..28854678,28855452..28855516,28862121..28862259, FT 28866519..28866676) FT /gene="PAN3" FT /locus_tag="RP11-179F17.3-002" FT /product="PAN3 polyA specific ribonuclease subunit homolog FT (S. cerevisiae)" FT /note="match: ESTs: Em:BI185404.1 Em:DR003408.1" FT mRNA join(AL356915.19:99266..99320,AL356915.19:134505..134626, FT AL356915.19:136726..136792,AL356915.19:138098..138168, FT AL356915.19:180464..180611,28830429..28830676, FT 28834584..28834688,28835538..28835595,28840852..28841013, FT 28841232..28841348,28841437..28841538,28844838..28845003, FT 28846118..28846208,28851374..28851513,28854549..28854678, FT 28855452..28855516,28862121..28862259,28866519..28869472) FT /gene="PAN3" FT /locus_tag="RP11-179F17.3-001" FT /product="PAN3 polyA specific ribonuclease subunit homolog FT (S. cerevisiae)" FT /note="match: cDNAs: Em:AB107584.1" FT /note="match: ESTs: Em:BF367733.1 Em:BF367739.1 FT Em:BF367749.1" FT misc_feature 28924690 FT /note="Clone_left_end: RP11-95G6" FT CDS join(AL356915.19:134513..134626,AL356915.19:136726..136792, FT AL356915.19:138098..138168,AL356915.19:180464..180611, FT 28830429..28830676,28834584..28834688,28835538..28835595, FT 28840852..28841013,28841232..28841348,28841437..28841538, FT 28844838..28845003,28846118..28846208,28851374..28851513, FT 28854549..28854678,28855452..28855516,28862121..28862259, FT 28866519..28866659) FT /gene="PAN3" FT /locus_tag="RP11-179F17.3-001" FT /standard_name="OTTHUMP00000018179" FT /product="PAN3 polyA specific ribonuclease subunit homolog FT (S. cerevisiae)" FT /note="match: proteins: Tr:Q76E13.1" FT /protein_id="CAI14848.1" FT /translation="MDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKYPLMQRMTNSSS FT SPSLLNDSAKPYSAHDPLTSPASSLFNDFGALNISQRRKTPNPTASEFIPKGGSTSRLS FT NVSQSNMSAFSQVFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHT FT PNPASYMVPSSASTSVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYH FT IYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHS FT LFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMW FT KKIQHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNADAYFTKRKWGQ FT HEGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNC FT VGVFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELV FT TINYSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQ FT NGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHI FT ISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL" FT CDS join(AL356915.19:134513..134626,AL356915.19:136726..136792, FT AL356915.19:138098..138168,AL356915.19:157418..157579, FT AL356915.19:180464..180611,28830429..28830676, FT 28834584..28834688,28835538..28835595,28840852..28841013, FT 28841232..28841348,28841437..28841538,28844838..28845003, FT 28846118..28846208,28851374..28851513,28854549..28854678, FT 28855452..28855516,28862121..28862259,28866519..28866659) FT /gene="PAN3" FT /locus_tag="RP11-179F17.3-002" FT /standard_name="OTTHUMP00000018180" FT /product="PAN3 polyA specific ribonuclease subunit homolog FT (S. cerevisiae)" FT /note="match: proteins: Tr:Q58A45.1" FT /protein_id="CAM20921.1" FT /translation="MDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKYPLMQRMTNSSS FT SPSLLNDSAKPYSAHDPLTSPASSLFNDFGALNISQRRKPRKYRLGMLEERLVPMGSKA FT RKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTSRLSNVSQS FT NMSAFSQVFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPAS FT YMVPSSASTSVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPT FT APHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSLFPLE FT PLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQH FT SNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNADAYFTKRKWGQHEGPL FT PRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNCVGVFD FT VLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYS FT SDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLF FT RLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLN FT KLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL" FT misc_feature 28942181..28942328 FT /note="Sequence from overlapping clone RP11-95G6 FT (AL139005). Assembly confirmed by restriction digest" FT misc_feature 28968943 FT /note="Clone_right_end: RP11-502P18" FT misc_feature 28970944..29072962 FT /note="annotated region of clone" FT misc_feature 29027051 FT /note="Tandem repeat. Forced join. Assembly confirmed by FT restriction digest data" FT misc_feature 29029808 FT /note="Clone_left_end: RP11-57H24" FT mRNA complement(join(AL138712.19:68065..71081, FT AL138712.19:74391..74485,AL138712.19:76556..76640, FT AL138712.19:79303..79445,AL138712.19:79706..79811, FT AL138712.19:85211..85310,AL138712.19:87136..87247, FT AL138712.19:89176..89298,AL138712.19:89975..90072, FT AL138712.19:90503..90659,AL138712.19:95175..95263, FT AL138712.19:97328..97441,AL138712.19:101738..101842, FT AL138712.19:106881..107013,AL138712.19:113158..113264, FT AL138712.19:125267..125398,AL138712.19:152598..152744, FT AL138712.19:157509..157817,28971097..28971205, FT 28979917..28980031,29001296..29001455,29001889..29002058, FT 29004187..29004304,29005273..29005447,29007956..29008092, FT 29008195..29008357,29012358..29012482,29041040..29041266, FT 29041658..29041754,29068917..29069232)) FT /gene="FLT1" FT /locus_tag="RP11-502P18.1-001" FT /product="fms-related tyrosine kinase 1 (vascular FT endothelial growth factor/vascular permeability factor FT receptor)" FT /note="match: cDNAs: Em:AB209050.1 Em:AF063657.2 FT Em:X51602.1" FT CDS complement(join(AL138712.19:70880..71081, FT AL138712.19:74391..74485,AL138712.19:76556..76640, FT AL138712.19:79303..79445,AL138712.19:79706..79811, FT AL138712.19:85211..85310,AL138712.19:87136..87247, FT AL138712.19:89176..89298,AL138712.19:89975..90072, FT AL138712.19:90503..90659,AL138712.19:95175..95263, FT AL138712.19:97328..97441,AL138712.19:101738..101842, FT AL138712.19:106881..107013,AL138712.19:113158..113264, FT AL138712.19:125267..125398,AL138712.19:152598..152744, FT AL138712.19:157509..157817,28971097..28971205, FT 28979917..28980031,29001296..29001455,29001889..29002058, FT 29004187..29004304,29005273..29005447,29007956..29008092, FT 29008195..29008357,29012358..29012482,29041040..29041266, FT 29041658..29041754,29068917..29068980)) FT /gene="FLT1" FT /locus_tag="RP11-502P18.1-001" FT /standard_name="OTTHUMP00000018183" FT /product="fms-related tyrosine kinase 1 (vascular FT endothelial growth factor/vascular permeability factor FT receptor)" FT /note="match: proteins: Sw:P17948.1 Tr:Q5TAR1.1" FT /protein_id="CAI17096.1" FT /translation="MVSYWDTGVLLCALLSCLLLTGSSSGSKLKDPELSLKGTQHIMQA FT GQTLHLQCRGEAAHKWSLPEMVSKESERLSITKSACGRNGKQFCSTLTLNTAQANHTGF FT YSCKYLAVPTSKKKETESAIYIFISDTGRPFVEMYSEIPEIIHMTEGRELVIPCRVTSP FT NITVTLKKFPLDTLIPDGKRIIWDSRKGFIISNATYKEIGLLTCEATVNGHLYKTNYLT FT HRQTNTIIDVQISTPRPVKLLRGHTLVLNCTATTPLNTRVQMTWSYPDEKNKRASVRRR FT IDQSNSHANIFYSVLTIDKMQNKDKGLYTCRVRSGPSFKSVNTSVHIYDKAFITVKHRK FT QQVLETVAGKRSYRLSMKVKAFPSPEVVWLKDGLPATEKSARYLTRGYSLIIKDVTEED FT AGNYTILLSIKQSNVFKNLTATLIVNVKPQIYEKAVSSFPDPALYPLGSRQILTCTAYG FT IPQPTIKWFWHPCNHNHSEARCDFCSNNEESFILDADSNMGNRIESITQRMAIIEGKNK FT MASTLVVADSRISGIYICIASNKVGTVGRNISFYITDVPNGFHVNLEKMPTEGEDLKLS FT CTVNKFLYRDVTWILLRTVNNRTMHYSISKQKMAITKEHSITLNLTIMNVSLQDSGTYA FT CRARNVYTGEEILQKKEITIRDQEAPYLLRNLSDHTVAISSSTTLDCHANGVPEPQITW FT FKNNHKIQQEPGIILGPGSSTLFIERVTEEDEGVYHCKATNQKGSVESSAYLTVQGTSD FT KSNLELITLTCTCVAATLFWLLLTLFIRKMKRSSSEIKTDYLSIIMDPDEVPLDEQCER FT LPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASE FT YKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFL FT NKDAALHMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGF FT YKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIY FT KNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE FT DFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDLLQANVQQDG FT KDYIPINAILTGNSGFTYSTPAFSEDFFKESISAPKFNSGSSDDVRYVNAFKFMSLERI FT KTFEELLPNATSMFDDYQGDSSTLLASPMLKRFTWTDSKPKASLKIDLRVTSKSKESGL FT SDVSRPSFCHSSCGHVSEGKRRFTYDHAELERKIACCSPPPDYNSVVLYSTPPI" FT misc_feature 29072862 FT /note="Clone_right_end: RP11-95G6" FT misc_feature 29072963..29199364 FT /note="annotated region of clone" FT polyA_signal 29083006..29174309 FT misc_feature 29134735 FT /note="Clone_left_end: RP11-97E23" FT misc_feature 29169860..29170041 FT /note="Sequence from overlapping clone bA97E23(AL359454). FT Assembly confirmed by restriction digest" FT CDS 29172970..29174189 FT /pseudo FT /locus_tag="RP11-57H24.1-001" FT /product="Eukaryotic initiation factor 4A (eIF4A) FT pseudogene" FT /note="match: proteins: Sw:P10630 Sw:P29562 Sw:P60842 FT Sw:P60843 Sw:Q14240 Sw:Q9P735 Tr:O42577" FT misc_feature 29199264 FT /note="Clone_right_end: RP11-57H24" FT misc_feature 29199365..29301094 FT /note="annotated region of clone" FT mRNA join(29233241..29233324,29236547..29236644, FT 29238646..29238706,29242610..29242711,29246476..29246569, FT 29252172..29253062) FT /gene="POMP" FT /locus_tag="RP11-97E23.4-001" FT /product="proteasome maturation protein" FT /note="match: cDNAs: Em:AF125097.1 Em:BC003390.1 FT Em:BC014334.1" FT mRNA join(29233241..29233324,29233959..29234056, FT 29236547..29236644,29238646..29238706,29242610..29242711, FT 29246476..29246569,29252172..29253062) FT /gene="POMP" FT /locus_tag="RP11-97E23.4-002" FT /product="proteasome maturation protein" FT /note="match: ESTs: Em:BI668600" FT CDS join(29233322..29233324,29236547..29236644, FT 29238646..29238706,29242610..29242711,29246476..29246569, FT 29252172..29252239) FT /gene="POMP" FT /locus_tag="RP11-97E23.4-001" FT /standard_name="OTTHUMP00000018185" FT /product="proteasome maturation protein" FT /note="match: proteins: Sw:Q3SZV5.1 Sw:Q5R9L9.1 Sw:Q9CQT5.1 FT Sw:Q9Y244.1" FT /protein_id="CAI17157.1" FT /translation="MNARGLGSELKDSIPVTELSASGPFESHDLLRKGFSCVKNELLPS FT HPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQQVQRLPFLSSSNLSLDV FT LRGNDETIGFEDILNDPSQSEVMGEPHLMVEYKLGLL" FT polyA_signal 29253027..29253032 FT polyA_site 29253062 FT polyA_site complement(29274855) FT polyA_signal complement(29274873..29274878) FT misc_feature 29277926 FT /note="Clone_left_end: RP11-161P17" FT mRNA complement(join(29274201..29275718,29278080..29278694)) FT /gene="RP11-97E23.2" FT /locus_tag="RP11-97E23.2-002" FT /product="novel protein" FT /note="match: cDNAs: Em:AK026720" FT CDS complement(join(29275084..29275093,29275638..29275718, FT 29278080..29278236,29284897..29284980,29286817..29287687, FT 29291947..29292135)) FT /gene="RP11-97E23.2" FT /locus_tag="RP11-97E23.2-001" FT /standard_name="OTTHUMP00000018184" FT /product="novel protein" FT /note="match: proteins: Tr:Q5RBM3.1 Tr:Q6P9B3.1 FT Tr:Q96QA1.1" FT /protein_id="CAI17158.1" FT /translation="MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDS FT NISECEKNKSSPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPM FT ILSSVGALATSVWLCLLCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHK FT QKTIRIAIIDFLLGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPV FT KECSSQNVTMSCSEGFKNLFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIF FT ILYELDSPLCWNEVFIGYGSALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMA FT MTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTA FT VSTFNGIYSATVAWYPGFTFLLSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDA FT SDRAC" FT CDS complement(join(29275634..29275718,29278080..29278236, FT 29284897..29284980,29286817..29287687,29291947..29292135)) FT /gene="RP11-97E23.2" FT /locus_tag="RP11-97E23.2-003" FT /standard_name="OTTHUMP00000178553" FT /product="novel protein" FT /note="match: proteins: Tr:Q3ZCV8.1 Tr:Q5BK75.1 Tr:Q6NUK5.1 FT Tr:Q7Z3Q1.1" FT /protein_id="CAM24029.1" FT /translation="MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDS FT NISECEKNKSSPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSISDHYGRKFPM FT ILSSVGALATSVWLCLLCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHK FT QKTIRIAIIDFLLGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPV FT KECSSQNVTMSCSEGFKNLFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIF FT ILYELDSPLCWNEVFIGYGSALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMA FT MTAFASTTLMMFLARVPFLFTIVPFSVLRSMLSKVVRSTEQGTLFACIAFLETLGGVTA FT VSTFNGIYSATVAWYPGFTFLLSAGLLLLPAISLCVVKCTSWNEGSYELLIQEESSEDA FT SDR" FT mRNA complement(join(29274854..29275093,29275638..29275718, FT 29278080..29278236,29284897..29284980,29286817..29287687, FT 29291947..29292159,29292633..29293107)) FT /gene="RP11-97E23.2" FT /locus_tag="RP11-97E23.2-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AF315594.1 Em:BC060850.1 FT Em:CR858615.1" FT mRNA complement(join(29274212..29275718,29278080..29278236, FT 29284897..29284980,29286817..29287687,29291947..29292159, FT 29292633..29292978)) FT /gene="RP11-97E23.2" FT /locus_tag="RP11-97E23.2-003" FT /product="novel protein" FT /note="match: cDNAs: Em:BC068556.1" FT CDS complement(join(29296523..29297504,29297642..29298158)) FT /pseudo FT /locus_tag="RP11-97E23.3-001" FT /product="cytochrome P450, 51 (lanosterol FT 14-alpha-demethylase) (CYP51) pseudogene" FT /note="match: proteins: Sw:P10614 Sw:P93596 Sw:Q02315 FT Sw:Q16850 Tr:Q9P4V9 Tr:Q9P4W0 Tr:Q9UVT0 Tr:Q9UVT1 Tr:Q9UVT2 FT Tr:Q9UVT3 Tr:Q9UVT4" FT misc_feature 29300994 FT /note="Clone_right_end: RP11-97E23" FT misc_feature 29301095..29440871 FT /note="annotated region of clone" FT misc_feature 29341080 FT /note="Clone_left_end: RP11-55F17" FT CDS 29352695..29353074 FT /pseudo FT /locus_tag="RP11-161P17.1-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q9P170" FT misc_feature 29386024 FT /note="Clone_right_end: RP11-656B16" FT misc_feature 29394136..29394260 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 29440771 FT /note="Clone_right_end: RP11-161P17" FT misc_feature 29492498 FT /note="Clone_right_end: RP11-55F17" FT misc_feature 29588469 FT /note="Clone_left_end: RP11-60N6" FT misc_feature 29592469..29763391 FT /note="annotated region of clone" FT CDS join(<29599451..29601040,29608022..29608262, FT 29674913..29675107,AL596092.8:94450..94611, FT AL596092.8:137359..137457,AL607144.5:20167..20378, FT AL596114.10:9593..9659,AL596114.10:49760..49974, FT AL596114.10:57510..57615,AL596114.10:62256..62329, FT AL596114.10:66848..66946,AL596114.10:68028..68147, FT AL596114.10:70707..70804,AL596114.10:72603..72816) FT /codon_start=1 FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-002" FT /standard_name="OTTHUMP00000018188" FT /product="KIAA0774" FT /note="match: proteins: Tr:O94872 Tr:Q9CY74" FT /protein_id="CAI41204.1" FT /translation="RGQIPGGGEGPQKTLPDHAVPAAFPATDSTSEGKSVRHPKPSTSE FT SKQSTPSETQTVGAHVLQVCSEHTSHSAHPEPALNLTLASKEIPSKLEAQLGQGKGEAK FT LDLKYVPPRRVEQEGKAAQEGYLGCHKEENLSALEGRDPCGEAHPEATDALGHLLNSDL FT HHLGVGRGNCEEKRGVNPGEQDSLHTTPKQGSASLGGADNQPTGKISPCAGEKLGERTS FT SSFSPGDSHVAFIPNNLTDSKPLDVIEEERRLGSGNKDSVMVLVFNPSVGENKTEVPEP FT LDPQSGRSEARESKEVTTSVAENRNLLENADKIESTSARADSVLNIPAPLHPETTVNMT FT YQPTTPSSSFQDVSVFGMDAGSPLVVPPPTDSARLLNTSPKVPDKNTCPSGIPKPVFTH FT SKDTPSSQEGMENYQVEKTEERTETKPIIMPKPKHVRPKIITYIRRNPQALGQVDASLV FT PVGLPYAPPTCTMPLPHEEKAAGGDLKPSANLYEKFKPDLQKPRVFSSGLMVSGIKPPG FT HPFSQMSEKFLQEVTDHPGKEEFCSPPYAHYEVPPTFYRSAMLLKPQLGLGAMSRLPSA FT KSRILIASQRSSASAIHPPGPITTATSLYSSDPSDLKKASSSNAAKSNLPKSGLRPPGY FT SRLPAAKLAAFGFVRSSSVSSVSSTQSGDSAQPEQGRPATRSTFGNEEQPVLKASLPSK FT DTPKGAGRVAPPASSSVTAPRRSLLPAPKSTSTPAGTKKDAQKDQDTNKPAVSSPKRVA FT ASTTKLHSPGYPKQRTAAARNGFPPKPDPQAREAERQLVLRLKERCEQQTRQLGVAQGE FT LKRAICGFDALAVATQHFFRKNESALVKEKELSIELANIRDEVAFHTAKCEKLQKEKEE FT LERRFEDEVKRLGWQQQAELQELEERLQLQFEAEMARLQEEHGDQLLSIRCQHQEQVED FT LTASHDAALLEMENNHTVAITILQDDHDHKVQELMSTHELEKKELEENFEKLRLSLQDQ FT VDTLTFQSQSLRDRARRFEEALRKNTEEQLEIALAPYQHLEEDMKSLKQVLEMKNQQIH FT EQEKKILELEKLAEKNIILEEKIQVLQQQNEDLKARIDQNTVVTRQLSEENANLQEYVE FT KETQEKKRLSRTNEELLWKLQTGDPTSPIKLSPTSPVYRGSSSGPSSPARVSTTPR" FT mRNA join(<29599451..29601040,29608022..29608262, FT 29674913..29675107,AL596092.8:94450..94611, FT AL596092.8:137359..137457,AL607144.5:20167..20378, FT AL596114.10:9593..9659,AL596114.10:49760..49974, FT AL596114.10:57510..57615,AL596114.10:62256..62329, FT AL596114.10:66848..66946,AL596114.10:68028..68147, FT AL596114.10:70707..70804,AL596114.10:72603..73365) FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-002" FT /product="KIAA0774" FT /note="match: cDNAs: Em:AB018317 Em:AK002529 Em:AK019985" FT /note="match: ESTs: Em:AA499003 Em:AI818409 Em:AI844429 FT Em:AL702629 Em:BE671488 Em:BF512653 Em:BG083023 Em:BI345752 FT Em:BI873235 Em:BM384721 Em:H04911 Em:R17357 Em:Z43260" FT misc_feature 29653709..29653766 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC FT clone.Restriction digest data confirm the assembly" FT misc_feature 29665989 FT /note="Clone_right_end: RP11-203D17" FT misc_feature 29761391 FT /note="Clone_right_end: RP11-60N6" FT misc_feature 29763392..29915232 FT /note="annotated region of clone" FT CDS join(AL160255.14:<8983..10572,AL160255.14:17554..17794, FT AL160255.14:84445..84639,29855841..29856002, FT 29898750..29898848,AL607144.5:20167..20378, FT AL596114.10:9593..9659,AL596114.10:49760..49974, FT AL596114.10:57510..57615,AL596114.10:62256..62329, FT AL596114.10:66848..66946,AL596114.10:68028..68147, FT AL596114.10:70707..70804,AL596114.10:72603..72816) FT /codon_start=1 FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-002" FT /standard_name="OTTHUMP00000018188" FT /product="KIAA0774" FT /note="match: proteins: Tr:O94872 Tr:Q9CY74" FT /protein_id="CAI40386.1" FT /translation="RGQIPGGGEGPQKTLPDHAVPAAFPATDSTSEGKSVRHPKPSTSE FT SKQSTPSETQTVGAHVLQVCSEHTSHSAHPEPALNLTLASKEIPSKLEAQLGQGKGEAK FT LDLKYVPPRRVEQEGKAAQEGYLGCHKEENLSALEGRDPCGEAHPEATDALGHLLNSDL FT HHLGVGRGNCEEKRGVNPGEQDSLHTTPKQGSASLGGADNQPTGKISPCAGEKLGERTS FT SSFSPGDSHVAFIPNNLTDSKPLDVIEEERRLGSGNKDSVMVLVFNPSVGENKTEVPEP FT LDPQSGRSEARESKEVTTSVAENRNLLENADKIESTSARADSVLNIPAPLHPETTVNMT FT YQPTTPSSSFQDVSVFGMDAGSPLVVPPPTDSARLLNTSPKVPDKNTCPSGIPKPVFTH FT SKDTPSSQEGMENYQVEKTEERTETKPIIMPKPKHVRPKIITYIRRNPQALGQVDASLV FT PVGLPYAPPTCTMPLPHEEKAAGGDLKPSANLYEKFKPDLQKPRVFSSGLMVSGIKPPG FT HPFSQMSEKFLQEVTDHPGKEEFCSPPYAHYEVPPTFYRSAMLLKPQLGLGAMSRLPSA FT KSRILIASQRSSASAIHPPGPITTATSLYSSDPSDLKKASSSNAAKSNLPKSGLRPPGY FT SRLPAAKLAAFGFVRSSSVSSVSSTQSGDSAQPEQGRPATRSTFGNEEQPVLKASLPSK FT DTPKGAGRVAPPASSSVTAPRRSLLPAPKSTSTPAGTKKDAQKDQDTNKPAVSSPKRVA FT ASTTKLHSPGYPKQRTAAARNGFPPKPDPQAREAERQLVLRLKERCEQQTRQLGVAQGE FT LKRAICGFDALAVATQHFFRKNESALVKEKELSIELANIRDEVAFHTAKCEKLQKEKEE FT LERRFEDEVKRLGWQQQAELQELEERLQLQFEAEMARLQEEHGDQLLSIRCQHQEQVED FT LTASHDAALLEMENNHTVAITILQDDHDHKVQELMSTHELEKKELEENFEKLRLSLQDQ FT VDTLTFQSQSLRDRARRFEEALRKNTEEQLEIALAPYQHLEEDMKSLKQVLEMKNQQIH FT EQEKKILELEKLAEKNIILEEKIQVLQQQNEDLKARIDQNTVVTRQLSEENANLQEYVE FT KETQEKKRLSRTNEELLWKLQTGDPTSPIKLSPTSPVYRGSSSGPSSPARVSTTPR" FT mRNA join(AL160255.14:<8983..10572,AL160255.14:17554..17794, FT AL160255.14:84445..84639,29855841..29856002, FT 29898750..29898848,AL607144.5:20167..20378, FT AL596114.10:9593..9659,AL596114.10:49760..49974, FT AL596114.10:57510..57615,AL596114.10:62256..62329, FT AL596114.10:66848..66946,AL596114.10:68028..68147, FT AL596114.10:70707..70804,AL596114.10:72603..73365) FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-002" FT /product="KIAA0774" FT /note="match: cDNAs: Em:AB018317 Em:AK002529 Em:AK019985" FT /note="match: ESTs: Em:AA499003 Em:AI818409 Em:AI844429 FT Em:AL702629 Em:BE671488 Em:BF512653 Em:BG083023 Em:BI345752 FT Em:BI873235 Em:BM384721 Em:H04911 Em:R17357 Em:Z43260" FT mRNA complement(join(29813760..29814095,29816666..29816835, FT 29824552..29824691)) FT /locus_tag="RP11-351N4.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BG187947" FT mRNA complement(join(29813516..29814095,29824552..29824691)) FT /locus_tag="RP11-351N4.3-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BG198112" FT mRNA complement(join(29813924..29814264,29816666..29816835, FT 29824552..29824691)) FT /locus_tag="RP11-351N4.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG204960" FT CDS 29880915..29881922 FT /pseudo FT /locus_tag="RP11-351N4.2-001" FT /product="GAPD (glyceraldehyde-3-phosphate dehydrogenase) FT pseudogene" FT /note="match: proteins: Sw:P00355 Sw:P04406 Sw:P04797 FT Sw:P16858 Sw:P17244 Sw:P46406 Sw:P51469 Sw:Q28259 Sw:Q28554 FT Sw:Q9N2D5 Tr:Q99N41 Tr:Q9QWU4" FT /db_xref="PSEUDO:CAI40387.1" FT misc_feature 29913232 FT /note="Clone_right_end: RP11-351N4" FT misc_feature 29915233..30006526 FT /note="annotated region of clone" FT CDS join(AL160255.14:<8983..10572,AL160255.14:17554..17794, FT AL160255.14:84445..84639,AL596092.8:94450..94611, FT AL596092.8:137359..137457,29933399..29933610, FT AL596114.10:9593..9659,AL596114.10:49760..49974, FT AL596114.10:57510..57615,AL596114.10:62256..62329, FT AL596114.10:66848..66946,AL596114.10:68028..68147, FT AL596114.10:70707..70804,AL596114.10:72603..72816) FT /codon_start=1 FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-002" FT /standard_name="OTTHUMP00000018188" FT /product="KIAA0774" FT /note="match: proteins: Tr:O94872 Tr:Q9CY74" FT /protein_id="CAI40565.1" FT /translation="RGQIPGGGEGPQKTLPDHAVPAAFPATDSTSEGKSVRHPKPSTSE FT SKQSTPSETQTVGAHVLQVCSEHTSHSAHPEPALNLTLASKEIPSKLEAQLGQGKGEAK FT LDLKYVPPRRVEQEGKAAQEGYLGCHKEENLSALEGRDPCGEAHPEATDALGHLLNSDL FT HHLGVGRGNCEEKRGVNPGEQDSLHTTPKQGSASLGGADNQPTGKISPCAGEKLGERTS FT SSFSPGDSHVAFIPNNLTDSKPLDVIEEERRLGSGNKDSVMVLVFNPSVGENKTEVPEP FT LDPQSGRSEARESKEVTTSVAENRNLLENADKIESTSARADSVLNIPAPLHPETTVNMT FT YQPTTPSSSFQDVSVFGMDAGSPLVVPPPTDSARLLNTSPKVPDKNTCPSGIPKPVFTH FT SKDTPSSQEGMENYQVEKTEERTETKPIIMPKPKHVRPKIITYIRRNPQALGQVDASLV FT PVGLPYAPPTCTMPLPHEEKAAGGDLKPSANLYEKFKPDLQKPRVFSSGLMVSGIKPPG FT HPFSQMSEKFLQEVTDHPGKEEFCSPPYAHYEVPPTFYRSAMLLKPQLGLGAMSRLPSA FT KSRILIASQRSSASAIHPPGPITTATSLYSSDPSDLKKASSSNAAKSNLPKSGLRPPGY FT SRLPAAKLAAFGFVRSSSVSSVSSTQSGDSAQPEQGRPATRSTFGNEEQPVLKASLPSK FT DTPKGAGRVAPPASSSVTAPRRSLLPAPKSTSTPAGTKKDAQKDQDTNKPAVSSPKRVA FT ASTTKLHSPGYPKQRTAAARNGFPPKPDPQAREAERQLVLRLKERCEQQTRQLGVAQGE FT LKRAICGFDALAVATQHFFRKNESALVKEKELSIELANIRDEVAFHTAKCEKLQKEKEE FT LERRFEDEVKRLGWQQQAELQELEERLQLQFEAEMARLQEEHGDQLLSIRCQHQEQVED FT LTASHDAALLEMENNHTVAITILQDDHDHKVQELMSTHELEKKELEENFEKLRLSLQDQ FT VDTLTFQSQSLRDRARRFEEALRKNTEEQLEIALAPYQHLEEDMKSLKQVLEMKNQQIH FT EQEKKILELEKLAEKNIILEEKIQVLQQQNEDLKARIDQNTVVTRQLSEENANLQEYVE FT KETQEKKRLSRTNEELLWKLQTGDPTSPIKLSPTSPVYRGSSSGPSSPARVSTTPR" FT mRNA join(AL160255.14:<8983..10572,AL160255.14:17554..17794, FT AL160255.14:84445..84639,AL596092.8:94450..94611, FT AL596092.8:137359..137457,29933399..29933610, FT AL596114.10:9593..9659,AL596114.10:49760..49974, FT AL596114.10:57510..57615,AL596114.10:62256..62329, FT AL596114.10:66848..66946,AL596114.10:68028..68147, FT AL596114.10:70707..70804,AL596114.10:72603..73365) FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-002" FT /product="KIAA0774" FT /note="match: cDNAs: Em:AB018317 Em:AK002529 Em:AK019985" FT /note="match: ESTs: Em:AA499003 Em:AI818409 Em:AI844429 FT Em:AL702629 Em:BE671488 Em:BF512653 Em:BG083023 Em:BI345752 FT Em:BI873235 Em:BM384721 Em:H04911 Em:R17357 Em:Z43260" FT misc_feature 29962145..29962198 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 30002527 FT /note="Clone_left_end: RP11-274A8" FT mRNA join(30002764..30003033,AL596114.10:9593..9659, FT AL596114.10:49760..49974,AL596114.10:57510..57615, FT AL596114.10:62256..62329,AL596114.10:66848..66946, FT AL596114.10:68028..68151,AL596114.10:70711..70804, FT AL596114.10:72603..73346) FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-001" FT /product="KIAA0774" FT /note="match: cDNAs: Em:AK021162" FT /note="match: ESTs: Em:BI838225 Em:BM906724" FT CDS join(30002980..30003033,AL596114.10:9593..9659, FT AL596114.10:49760..49974,AL596114.10:57510..57615, FT AL596114.10:62256..62329,AL596114.10:66848..66946, FT AL596114.10:68028..68151,AL596114.10:70711..70804, FT AL596114.10:72603..72816) FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-001" FT /standard_name="OTTHUMP00000018187" FT /product="KIAA0774" FT /protein_id="CAI40566.1" FT /translation="MGHCCCKPYNCLQCLDKTNESALVKEKELSIELANIRDEVAFHTA FT KCEKLQKEKEELERRFEDEVKRLGWQQQAELQELEERLQLQFEAEMARLQEEHGDQLLS FT IRCQHQEQVEDLTASHDAALLEMENNHTVAITILQDDHDHKVQELMSTHELEKKELEEN FT FEKLRLSLQDQVDTLTFQSQSLRDRARRFEEALRKNTEEQLEIALAPYQHLEEDMKSLK FT QVLEMKNQQIHEQEKKILELEKLVKKNIILEEKIQVLQQQNEDLKARIDQNTVVTRQLS FT EENANLQEYVEKETQEKKRLSRTNEELLWKLQTGDPTSPIKLSPTSPVYRGSSSGPSSP FT ARVSTTPR" FT misc_feature 30006527..30177718 FT /note="annotated region of clone" FT CDS join(AL160255.14:<8983..10572,AL160255.14:17554..17794, FT AL160255.14:84445..84639,AL596092.8:94450..94611, FT AL596092.8:137359..137457,AL607144.5:20167..20378, FT 30014120..30014186,30054287..30054501,30062037..30062142, FT 30066783..30066856,30071375..30071473,30072555..30072674, FT 30075234..30075331,30077130..30077343) FT /codon_start=1 FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-002" FT /standard_name="OTTHUMP00000018188" FT /product="KIAA0774" FT /note="match: proteins: Tr:O94872 Tr:Q9CY74" FT /protein_id="CAI39910.1" FT /translation="RGQIPGGGEGPQKTLPDHAVPAAFPATDSTSEGKSVRHPKPSTSE FT SKQSTPSETQTVGAHVLQVCSEHTSHSAHPEPALNLTLASKEIPSKLEAQLGQGKGEAK FT LDLKYVPPRRVEQEGKAAQEGYLGCHKEENLSALEGRDPCGEAHPEATDALGHLLNSDL FT HHLGVGRGNCEEKRGVNPGEQDSLHTTPKQGSASLGGADNQPTGKISPCAGEKLGERTS FT SSFSPGDSHVAFIPNNLTDSKPLDVIEEERRLGSGNKDSVMVLVFNPSVGENKTEVPEP FT LDPQSGRSEARESKEVTTSVAENRNLLENADKIESTSARADSVLNIPAPLHPETTVNMT FT YQPTTPSSSFQDVSVFGMDAGSPLVVPPPTDSARLLNTSPKVPDKNTCPSGIPKPVFTH FT SKDTPSSQEGMENYQVEKTEERTETKPIIMPKPKHVRPKIITYIRRNPQALGQVDASLV FT PVGLPYAPPTCTMPLPHEEKAAGGDLKPSANLYEKFKPDLQKPRVFSSGLMVSGIKPPG FT HPFSQMSEKFLQEVTDHPGKEEFCSPPYAHYEVPPTFYRSAMLLKPQLGLGAMSRLPSA FT KSRILIASQRSSASAIHPPGPITTATSLYSSDPSDLKKASSSNAAKSNLPKSGLRPPGY FT SRLPAAKLAAFGFVRSSSVSSVSSTQSGDSAQPEQGRPATRSTFGNEEQPVLKASLPSK FT DTPKGAGRVAPPASSSVTAPRRSLLPAPKSTSTPAGTKKDAQKDQDTNKPAVSSPKRVA FT ASTTKLHSPGYPKQRTAAARNGFPPKPDPQAREAERQLVLRLKERCEQQTRQLGVAQGE FT LKRAICGFDALAVATQHFFRKNESALVKEKELSIELANIRDEVAFHTAKCEKLQKEKEE FT LERRFEDEVKRLGWQQQAELQELEERLQLQFEAEMARLQEEHGDQLLSIRCQHQEQVED FT LTASHDAALLEMENNHTVAITILQDDHDHKVQELMSTHELEKKELEENFEKLRLSLQDQ FT VDTLTFQSQSLRDRARRFEEALRKNTEEQLEIALAPYQHLEEDMKSLKQVLEMKNQQIH FT EQEKKILELEKLAEKNIILEEKIQVLQQQNEDLKARIDQNTVVTRQLSEENANLQEYVE FT KETQEKKRLSRTNEELLWKLQTGDPTSPIKLSPTSPVYRGSSSGPSSPARVSTTPR" FT mRNA join(AL160255.14:<8983..10572,AL160255.14:17554..17794, FT AL160255.14:84445..84639,AL596092.8:94450..94611, FT AL596092.8:137359..137457,AL607144.5:20167..20378, FT 30014120..30014186,30054287..30054501,30062037..30062142, FT 30066783..30066856,30071375..30071473,30072555..30072674, FT 30075234..30075331,30077130..30077892) FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-002" FT /product="KIAA0774" FT /note="match: ESTs: Em:AA499003 Em:AI818409 Em:AI844429 FT Em:AL702629 Em:BE671488 Em:BF512653 Em:BG083023 Em:BI345752 FT Em:BI873235 Em:BM384721 Em:H04911 Em:R17357 Em:Z43260" FT /note="match: cDNAs: Em:AB018317 Em:AK002529 Em:AK019985" FT misc_feature 30060380 FT /note="Clone_right_end: RP11-398A16" FT mRNA complement(join(30051033..30051076,30059006..30059443, FT 30061637..30061887)) FT /locus_tag="RP11-274A8.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI223246" FT misc_feature 30063127..30063310 FT /note="Sequence from overlapping clone RP11-218E6 FT (Al391599). Assembly confirmed by restriction digest" FT polyA_signal 30077868..30077873 FT polyA_site 30077892 FT polyA_site complement(30083547) FT polyA_signal complement(30083565..30083570) FT mRNA complement(join(30091004..30091447,30091710..30091927, FT 30093584..30093647)) FT /gene="SLC7A1" FT /locus_tag="RP11-274A8.1-002" FT /product="solute carrier family 7 (cationic amino acid FT transporter, y+ system), member 1" FT /note="match: ESTs: Em:BG744556" FT mRNA join(AL607144.5:89532..89801,30014120..30014186, FT 30054287..30054501,30062037..30062142,30066783..30066856, FT 30071375..30071473,30072555..30072678,30075238..30075331, FT 30077130..30077873) FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-001" FT /product="KIAA0774" FT /note="match: ESTs: Em:BI838225 Em:BM906724" FT /note="match: cDNAs: Em:AK021162" FT CDS join(AL607144.5:89748..89801,30014120..30014186, FT 30054287..30054501,30062037..30062142,30066783..30066856, FT 30071375..30071473,30072555..30072678,30075238..30075331, FT 30077130..30077343) FT /gene="KIAA0774" FT /locus_tag="RP11-274A8.3-001" FT /standard_name="OTTHUMP00000018187" FT /product="KIAA0774" FT /protein_id="CAI39912.1" FT /translation="MGHCCCKPYNCLQCLDKTNESALVKEKELSIELANIRDEVAFHTA FT KCEKLQKEKEELERRFEDEVKRLGWQQQAELQELEERLQLQFEAEMARLQEEHGDQLLS FT IRCQHQEQVEDLTASHDAALLEMENNHTVAITILQDDHDHKVQELMSTHELEKKELEEN FT FEKLRLSLQDQVDTLTFQSQSLRDRARRFEEALRKNTEEQLEIALAPYQHLEEDMKSLK FT QVLEMKNQQIHEQEKKILELEKLVKKNIILEEKIQVLQQQNEDLKARIDQNTVVTRQLS FT EENANLQEYVEKETQEKKRLSRTNEELLWKLQTGDPTSPIKLSPTSPVYRGSSSGPSSP FT ARVSTTPR" FT CDS complement(join(30088617..30088720,30090275..30090383, FT 30091281..30091447,30091710..30091927,30093584..30093686, FT 30096454..30096593,30097403..30097625,30098269..30098390, FT 30104675..30104849,30106961..30107119,30109956..30110325)) FT /gene="SLC7A1" FT /locus_tag="RP11-274A8.1-001" FT /standard_name="OTTHUMP00000018189" FT /product="solute carrier family 7 (cationic amino acid FT transporter, y+ system), member 1" FT /note="match: proteins: Sw:P30825.1 Tr:Q5DT24.1 Tr:Q5JR50.1 FT Tr:Q5R8Z0.1" FT /protein_id="CAI39913.1" FT /translation="MGCKVLLNIGQQMLRRKVVDCSREETRLSRCLNTFDLVALGVGST FT LGAGVYVLAGAVARENAGPAIVISFLIAALASVLAGLCYGEFGARVPKTGSAYLYSYVT FT VGELWAFITGWNLILSYIIGTSSVARAWSATFDELIGRPIGEFSRTHMTLNAPGVLAEN FT PDIFAVIIILILTGLLTLGVKESAMVNKIFTCINVLVLGFIMVSGFVKGSVKNWQLTEE FT DFGNTSGRLCLNNDTKEGKPGVGGFMPFGFSGVLSGAATCFYAFVGFDCIATTGEEVKN FT PQKAIPVGIVASLLICFIAYFGVSAALTLMMPYFCLDNNSPLPDAFKHVGWEGAKYAVA FT VGSLCALSASLLGSMFPMPRVIYAMAEDGLLFKFLANVNDRTKTPIIATLASGAVAAVM FT AFLFDLKDLVDLMSIGTLLAYSLVAACVLVLRYQPEQPNLVYQMASTSDELDPADQNEL FT ASTNDSQLGFLPEAEMFSLKTILSPKNMEPSKISGLIVNISTSLIAVLIITFCIVTVLG FT REALTKGALWAVFLLAGSALLCAVVTGVIWRQPESKTKLSFKVPFLPVLPILSIFVNVY FT LMMQLDQGTWVRFAVWMLIGFIIYFGYGLWHSEEASLDADQARTPDGNLDQCK" FT CDS complement(<30109961..30110325) FT /gene="SLC7A1" FT /locus_tag="RP11-274A8.1-003" FT /standard_name="OTTHUMP00000018191" FT /product="solute carrier family 7 (cationic amino acid FT transporter, y+ system), member 1" FT /protein_id="CAI39914.1" FT /translation="MGCKVLLNIGQQMLRRKVVDCSREETRLSRCLNTFDLVALGVGST FT LGAGVYVLAGAVARENAGPAIVISFLIAALASVLAGLCYGEFGARVPKTGSAYLYSYVT FT VGELWAFITGWNLILSY" FT misc_feature 30111942 FT /note="Clone_left_end: RP11-226D23" FT misc_feature 30130207..30130246 FT /note="Single clone region. Reads generated from a FT transposon library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(<30109961..30110339,30127898..30127997, FT 30160862..30160929)) FT /gene="SLC7A1" FT /locus_tag="RP11-274A8.1-003" FT /product="solute carrier family 7 (cationic amino acid FT transporter, y+ system), member 1" FT /note="match: ESTs: Em:AL596602 Em:AL707645" FT mRNA complement(join(30083547..30088720,30090275..30090383, FT 30091281..30091447,30091710..30091927,30093584..30093686, FT 30096454..30096593,30097403..30097625,30098269..30098390, FT 30104675..30104849,30106961..30107119,30109956..30110339, FT 30127898..30127997,30169553..30169721)) FT /gene="SLC7A1" FT /locus_tag="RP11-274A8.1-001" FT /product="solute carrier family 7 (cationic amino acid FT transporter, y+ system), member 1" FT /note="match: cDNAs: Em:BC063303.1 Em:BC115407.1 FT Em:X57303.1" FT misc_feature 30175719 FT /note="Clone_right_end: RP11-274A8" FT misc_feature 30192707 FT /note="Clone_left_end: RP11-400N12" FT misc_feature 30196707..30367602 FT /note="annotated region of clone" FT misc_feature 30279595..30279631 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 30282576 FT /note="Clone_left_end: RP11-174H18" FT polyA_site complement(30338508) FT polyA_signal complement(30338564..30338569) FT mRNA join(AL139188.14:149133..150305, FT complement(30351292..30351400), FT complement(30346249..30346335), FT complement(30341755..30341832), FT complement(30338508..30341444)) FT /gene="UBL3" FT /locus_tag="RP11-400N12.1-001" FT /product="ubiquitin-like 3" FT /note="match: cDNAs: Em:AK056580.1 Em:BC044582.1 FT Em:BC059385.1" FT CDS join(AL139188.14:150279..150305, FT complement(30351292..30351400), FT complement(30346249..30346335), FT complement(30341755..30341832), FT complement(30341392..30341444)) FT /gene="UBL3" FT /locus_tag="RP11-400N12.1-001" FT /standard_name="OTTHUMP00000018193" FT /product="ubiquitin-like 3" FT /note="match: proteins: Sw:O95164.1 Sw:Q2TA46.1 Sw:Q5BJT2.1 FT Sw:Q9Z2M6.1 Tr:Q3UKM1.1 Tr:Q3UYL1.1 Tr:Q5RL72.1 Tr:Q5ZJ13.1 FT Tr:Q6GNJ9.1 Tr:Q6TGS9.1" FT /protein_id="CAH73447.1" FT /translation="MSSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPM FT DWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRN FT REKTGESNCCVIL" FT misc_feature 30365602 FT /note="Clone_right_end: RP11-400N12" FT misc_feature 30367603..30412515 FT /note="annotated region of clone" FT misc_feature 30412316 FT /note="Clone_left_end: RP11-90M5" FT misc_feature complement(30412516..30573953) FT /note="annotated region of clone" FT misc_feature complement(30525816) FT /note="Clone_left_end: RP11-174H18" FT polyA_site 30524625 FT polyA_signal 30524604..30524609 FT polyA_site 30516704 FT CDS join(30512085..30512146,30521740..30521908, FT 30524454..30524495) FT /locus_tag="RP11-90M5.1-001" FT /standard_name="OTTHUMP00000018192" FT /product="novel protein" FT /protein_id="CAI17022.1" FT /translation="MWHYIGAAECPYLQLPRCRGSSTRYWHKKSRGRLTWPWLLMSQLR FT TCHINSPFPLAVTCGVKFSEAAVPVHLSGCVQKMNICLQLQFSND" FT mRNA join(30512043..30512146,30516234..30516704) FT /locus_tag="RP11-90M5.1-002" FT /product="novel protein" FT /note="match: ESTs: Em:CB250685.1" FT mRNA join(30510042..30510361,30510653..30510838, FT 30511339..30511418,30512043..30512146,30521740..30521908, FT 30524454..30524625) FT /locus_tag="RP11-90M5.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:AI026706.1 Em:BX118434.1" FT mRNA complement(join(30492784..30493209,30500640..30500788)) FT /locus_tag="RP11-90M5.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI829188" FT /note="match: cDNAs: Em:BC039674.1" FT misc_feature complement(30482157) FT /note="Clone_right_end: RP11-629E24" FT mRNA join(30446750..30447285,30462166..30462542) FT /locus_tag="RP11-90M5.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BQ676221.1 Em:BQ677672.1 FT Em:BQ682959.1 Em:BQ892758.1 Em:BU157760.1" FT CDS complement(30440096..30440306) FT /pseudo FT /locus_tag="RP11-90M5.2-001" FT /product="translocase of inner mitochondrial membrane 8 FT homolog B (yeast) (TIMM8B) pseudogene" FT /note="match: proteins: Sw:O60220 Sw:P62078 Sw:Q9VTN3 FT Sw:Q9WVA2 Sw:Q9Y1A3 Sw:Q9Y5J9" FT mRNA complement(join(AL158193.13:143802..146738, FT AL158193.13:147049..147126,AL158193.13:151543..151629, FT AL158193.13:156586..156694,30423649..30424821)) FT /gene="UBL3" FT /locus_tag="RP11-400N12.1-001" FT /product="ubiquitin-like 3" FT /note="match: cDNAs: Em:AK056580.1 Em:BC044582.1 FT Em:BC059385.1" FT CDS complement(join(AL158193.13:146686..146738, FT AL158193.13:147049..147126,AL158193.13:151543..151629, FT AL158193.13:156586..156694,30423649..30423675)) FT /gene="UBL3" FT /locus_tag="RP11-400N12.1-001" FT /standard_name="OTTHUMP00000018193" FT /product="ubiquitin-like 3" FT /note="match: proteins: Sw:O95164.1 Sw:Q2TA46.1 Sw:Q5BJT2.1 FT Sw:Q9Z2M6.1 Tr:Q3UKM1.1 Tr:Q3UYL1.1 Tr:Q5RL72.1 Tr:Q5ZJ13.1 FT Tr:Q6GNJ9.1 Tr:Q6TGS9.1" FT /protein_id="CAI17023.1" FT /translation="MSSNVPADMINLRLILVSGKTKEFLFSPNDSASDIAKHVYDNWPM FT DWEEEQVSSPNILRLIYQGRFLHGNVTLGALKLPFGKTTVMHLVARETLPEPNSQGQRN FT REKTGESNCCVIL" FT misc_feature complement(30412516) FT /note="Clone_left_end: RP11-90M5" FT misc_feature complement(30573954..30711200) FT /note="annotated region of clone" FT misc_feature complement(30697116..30697209) FT /note="Single clone region. Assembly is consistent with FT restriction digest" FT misc_feature complement(30691401) FT /note="Clone_right_end: RP11-490N5" FT mRNA complement(join(30681736..30682108,30682906..30683012)) FT /locus_tag="RP11-629E24.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:T83449.1" FT mRNA complement(join(30677315..30679832,30682906..30683005)) FT /locus_tag="RP11-629E24.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AA410361.1 Em:BQ030378.1 FT Em:BX350339.1 Em:BX370305.1 Em:BX383553.1 Em:BX383554.1" FT polyA_signal complement(30677352..30677357) FT polyA_site complement(30677315) FT mRNA complement(30596158..30597937) FT /locus_tag="RP11-629E24.2-001" FT /product="TEC" FT polyA_site complement(30596158) FT misc_feature complement(30573954) FT /note="Clone_left_end: RP11-629E24" FT misc_feature 30711201..30772715 FT /note="annotated region of clone" FT polyA_site complement(30726023) FT polyA_signal complement(30726051..30726056) FT mRNA complement(join(30726023..30726286,30727171..30733758)) FT /locus_tag="RP11-490N5.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BX648491.1" FT mRNA join(30728203..30728278,30728426..30728723) FT /locus_tag="RP11-490N5.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI203837" FT polyA_site complement(30770580) FT mRNA complement(30770580..30771018) FT /locus_tag="RP11-490N5.3-001" FT /product="TEC" FT /note="match: ESTs: Em:AA744357.1 Em:AW190404.1 FT Em:CA449981.1" FT polyA_site complement(30770592) FT polyA_signal complement(30770610..30770615) FT misc_feature 30772516 FT /note="Clone_left_end: RP11-374F3" FT misc_feature 30772716..30954918 FT /note="annotated region of clone" FT misc_feature 30773058..30773215 FT /note="Sequence from overlapping clones bA490N5(AL157770) FT and bA458M22(AL162380). Assembly confirmed by restriction FT digest" FT polyA_site complement(30776767) FT polyA_site complement(30776769) FT polyA_site complement(30776775) FT polyA_signal complement(30776788..30776793) FT misc_feature 30779826..30779949 FT /note="Sequence from overlapping clones bA490N5(AL157770) FT and bA458M22(AL162380). Assembly confirmed by restriction FT digest" FT misc_feature 30780581 FT /note="Clone_right_end: RP11-490N5" FT polyA_site complement(30782177) FT polyA_signal complement(30782190..30782195) FT mRNA complement(join(30782862..30782875,30784453..30784801)) FT /gene="KATNAL1" FT /locus_tag="RP11-374F3.1-005" FT /product="katanin p60 subunit A-like 1" FT misc_feature 30798677..30798681 FT /note="Sequence from clone PCR only" FT CDS complement(join(30782677..30782875,30784453..30784579, FT 30801549..30801683,30804605..30804731,30805451..30805609, FT 30814597..30814702,30815096..30815223,30829584..30829752, FT 30854200..30854360,30857753..30857914)) FT /gene="KATNAL1" FT /locus_tag="RP11-374F3.1-001" FT /standard_name="OTTHUMP00000018194" FT /product="katanin p60 subunit A-like 1" FT /note="match: proteins: Sw:Q9BW62" FT /protein_id="CAI13718.1" FT /translation="MNLAEICDNAKKGREYALLGNYDSSMVYYQGVMQQIQRHCQSVRD FT PAIKGKWQQVRQELLEEYEQVKSIVSTLESFKIDKPPDFPVSCQDEPFRDPAVWPPPVP FT AEHRAPPQIRRPNREVRPLRKEMAGVGARGPVGRAHPISKSEKPSTSRDKDYRARGRDD FT KGRKNMQDGASDGEMPKFDGAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKKLLRE FT AVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKY FT RGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLIQMDGVG FT GALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVEL FT DPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKEELQMPVTK FT GDFELALKKIAKSVSAADLEKYEKWMVEFGSA" FT CDS complement(join(<30829625..30829752,30854200..30854360, FT 30857753..30857914)) FT /gene="KATNAL1" FT /locus_tag="RP11-374F3.1-003" FT /standard_name="OTTHUMP00000061638" FT /product="katanin p60 subunit A-like 1" FT /protein_id="CAI13720.1" FT /translation="MNLAEICDNAKKGREYALLGNYDSSMVYYQGVMQQIQRHCQSVRD FT PAIKGKWQQVRQELLEEYEQVKSIVSTLESFKIDKPPDFPVSCQDEPFRDPAVWPPPVP FT AEHRAPPQIRRPNREVRPLRKEMAGVGARGPVGRAHPISKSEKPST" FT CDS complement(join(<30829617..30829752,30854200..30854360, FT 30857753..30857914)) FT /gene="KATNAL1" FT /locus_tag="RP11-374F3.1-004" FT /standard_name="OTTHUMP00000190858" FT /product="katanin p60 subunit A-like 1" FT /protein_id="CAM18107.1" FT /translation="MNLAEICDNAKKGREYALLGNYDSSMVYYQGVMQQIQRHCQSVRD FT PAIKGKWQQVRQELLEEYEQVKSIVSTLESFKIDKPPDFPVSCQDEPFRDPAVWPPPVP FT AEHRAPPQIRRPNREVRPLRKEMAGVGARGPVGRAHPISKSEKPSTSRD" FT CDS 30870284..30870872 FT /pseudo FT /locus_tag="RP11-374F3.2-001" FT /product="peroxiredoxin 2 (PRDX2) pseudogene" FT /note="match: proteins: Sw:O24364 Sw:P32119 Sw:P35704 FT Sw:P35705 Sw:Q61171 Sw:Q8T6C4 Sw:Q96291 Tr:O96763 Tr:O96874 FT Tr:Q19265 Tr:Q24841 Tr:Q93X25 Tr:Q95NF5 Tr:Q96291 Tr:Q9BP39 FT Tr:Q9C5R8 Tr:Q9FED5 Tr:Q9FNH9 Tr:Q9FUC5 Tr:Q9NL90" FT mRNA complement(join(<30829625..30829752,30854200..30854360, FT 30857753..30857928,30880850..30881181)) FT /gene="KATNAL1" FT /locus_tag="RP11-374F3.1-003" FT /product="katanin p60 subunit A-like 1" FT /note="match: ESTs: Em:BG913072.1" FT mRNA complement(join(<30829617..30829752,30854200..30854360, FT 30857753..30857928,30880901..30880993)) FT /gene="KATNAL1" FT /locus_tag="RP11-374F3.1-004" FT /product="katanin p60 subunit A-like 1" FT /note="match: ESTs: Em:DA815719.1" FT mRNA complement(join(30782617..30782875,30784453..30784579, FT 30801549..30801683,30804605..30804731,30805451..30805609, FT 30814597..30814702,30815096..30815223,30829584..30829752, FT 30854200..30854360,30857753..30857928,30881077..30881163)) FT /gene="KATNAL1" FT /locus_tag="RP11-374F3.1-002" FT /product="katanin p60 subunit A-like 1" FT /note="match: ESTs: Em:AL702104.1" FT /note="match: cDNAs: Em:AK097423.1 Em:BC030434.1" FT mRNA complement(join(30776767..30782875,30784453..30784579, FT 30801549..30801683,30804605..30804731,30805451..30805609, FT 30814597..30814702,30815096..30815223,30829584..30829752, FT 30854200..30854360,30857753..30857928,30881468..30881621)) FT /gene="KATNAL1" FT /locus_tag="RP11-374F3.1-001" FT /product="katanin p60 subunit A-like 1" FT /note="match: ESTs: Em:AA235041.1 Em:AA235208.1 FT Em:AA280875.1 Em:AA280955.1 Em:AA573312.1 Em:AA699951.1 FT Em:AA713512.1 Em:AA782120.1 Em:AA825997.1 Em:AA908229.1 FT Em:AI039250.1 Em:AI080268.1 Em:AI084499.1 Em:AI367627.1 FT Em:AI379588.1 Em:AI435860.1 Em:AI732299.1 Em:AI732303.1 FT Em:AI807482.1 Em:AI809648.1 Em:AI820721.1 Em:AI820725.1 FT Em:AL600726.1 Em:AL704125.1 Em:AW019882.1 Em:AW892063.1 FT Em:AW960320.1 Em:BE311939.1 Em:BE503628.1 Em:BF510685.1 FT Em:BF515217.1 Em:BF590232.1 Em:BF668356.1 Em:BG055465.1 FT Em:BG057772.1 Em:BG777062.1 Em:BI462044.1 Em:BI462106.1 FT Em:BI490924.1 Em:BM845098.1 Em:BM990828.1 Em:BM993107.1 FT Em:BQ574151.1 Em:BQ574191.1 Em:BQ772434.1 Em:BU431208.1 FT Em:BU537882.1 Em:BU568394.1 Em:BU568862.1 Em:BU634530.1 FT Em:BX098041.1 Em:BX503762.1 Em:CA419634.1 Em:CA434944.1 FT Em:CA437977.1 Em:CB243650.1 Em:CD694916.1 Em:CF242837.1 FT Em:CF455741.1 Em:R49830.1 Em:R50363.1" FT /note="match: cDNAs: Em:BC000612.2 Em:BX647147.1" FT misc_feature 30888748 FT /note="Clone_left_end: RP11-223E19" FT polyA_site complement(30890497) FT polyA_site complement(30890500) FT polyA_signal complement(30890513..30890518) FT mRNA complement(join(30890497..30890771,30893886..30894040)) FT /locus_tag="RP11-374F3.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA424211.1 Em:AA437211.1 FT Em:AA437251.1 Em:AA442274.1 Em:AA905684.1 Em:AW663983.1 FT Em:AW665803.1 Em:BX109554.1" FT misc_feature 30911200 FT /note="Clone_right_end: RP11-458M22" FT polyA_site complement(30914407) FT polyA_signal complement(30914419..30914424) FT mRNA complement(join(30931402..30931529,30931879..30932026, FT 30932391..30932513,30937298..30937363,30938206..30938333)) FT /locus_tag="RP11-374F3.4-004" FT /product="novel transcript" FT /note="match: ESTs: Em:CR745144.1 Em:H30223.1" FT mRNA complement(join(30916597..30917023,30932391..30932513, FT 30937298..30937363,30938206..30938342,30939607..30939898)) FT /locus_tag="RP11-374F3.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BQ420287.1" FT mRNA complement(join(30915496..30915733,30937298..30937363, FT 30938206..30938342,30941738..30941804)) FT /locus_tag="RP11-374F3.4-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AA355210.1 Em:AA747929.1" FT mRNA complement(join(30931882..30932026,30932391..30932513, FT 30937298..30937363,30946422..30946511)) FT /locus_tag="RP11-374F3.4-008" FT /product="novel transcript" FT /note="match: ESTs: Em:BG502921.1" FT mRNA complement(join(30937313..30937363,30941738..30941854, FT 30946422..30946511,30946959..30947169)) FT /locus_tag="RP11-374F3.4-005" FT /product="novel transcript" FT /note="match: ESTs: Em:AA306534.1" FT mRNA complement(join(30914407..30915605,30937298..30937363, FT 30941738..30941854,30946422..30946511,30947920..30948036)) FT /locus_tag="RP11-374F3.4-007" FT /product="novel transcript" FT /note="match: ESTs: Em:AA310998.1 Em:AW962699.1 FT Em:AW962701.1 Em:BM875328.1 Em:BM875575.1 Em:BX414083.1 FT Em:BX443263.1 Em:BX443263.2" FT /note="match: cDNAs: Em:CR598049.1" FT mRNA complement(join(30944609..30944662,30946422..30946511, FT 30947920..30948051)) FT /locus_tag="RP11-374F3.4-009" FT /product="novel transcript" FT /note="match: ESTs: Em:DA815089.1" FT mRNA complement(join(30931879..30932026,30932391..30932513, FT 30937298..30937363,30946422..30946511,30949604..30949913, FT 30950964..30951282)) FT /locus_tag="RP11-374F3.4-003" FT /product="novel transcript" FT /note="match: ESTs: Em:AW402484.1 Em:BI771793.1 FT Em:BI835500.1 Em:CF135620.1" FT mRNA complement(join(30948140..30948230,30949604..30949913, FT 30950964..30951101)) FT /locus_tag="RP11-374F3.4-006" FT /product="novel transcript" FT /note="match: ESTs: Em:BF238111.1 Em:BF238195.1" FT misc_feature 30954818 FT /note="Clone_right_end: RP11-374F3" FT misc_feature 30954919..31016761 FT /note="annotated region of clone" FT misc_feature 30982605..30982622 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 30995901..30996116 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA complement(join(30993656..30994082,30996354..30996374)) FT /locus_tag="RP11-223E19.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:CF138692.1" FT CDS 31002128..31002592 FT /pseudo FT /locus_tag="RP11-223E19.1-001" FT /product="ubiquitin-conjugating enzyme E2L 3 (UBE2L3) FT pseudogene" FT /note="match: proteins: Sw:O14933 Sw:P52487 Sw:P68037 FT Sw:Q9NPD8 Sw:Q9QZU9 Tr:O96840 Tr:Q21633 Tr:Q6PH42 Tr:Q6XHD2 FT Tr:Q6XIX9 Tr:Q7QDD7 Tr:Q8N5D8 Tr:Q9VZ73" FT /db_xref="PSEUDO:CAH71469.1" FT misc_feature 31016762..31150628 FT /note="annotated region of clone" FT misc_feature 31016762 FT /note="Clone_left_end: RP11-550P23" FT misc_feature 31025761..31025803 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 31030900..31030906 FT /note="Single clone region. Sequence from clone PCR only" FT polyA_site complement(31033987) FT polyA_signal complement(31034010..31034015) FT polyA_site complement(31035032) FT polyA_signal complement(31035049..31035054) FT mRNA complement(join(31036483..31036849,31037344..31037401)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-008" FT /product="high-mobility group box 1" FT /note="match: ESTs: Em:BF994388" FT CDS complement(join(31035494..31035670,31036675..31036849, FT 31037344..31037489,31037668..31037817)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-001" FT /standard_name="OTTHUMP00000018196" FT /product="high-mobility group box 1" FT /protein_id="CAI15600.1" FT /translation="MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKC FT SERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL FT FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR FT AKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE" FT CDS complement(join(<31035621..31035670,31036709..31036849, FT 31037344..31037489,31037668..31037817)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-002" FT /standard_name="OTTHUMP00000018197" FT /product="high-mobility group box 1" FT /protein_id="CAI15601.1" FT /translation="MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKC FT SERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL FT FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKILLHIELKESLMQQKR" FT mRNA complement(join(31035032..31035670,31035776..31035825, FT 31036675..31036849,31037344..31037489,31037668..31038384)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-009" FT /product="high-mobility group box 1" FT /note="match: cDNAs: Em:BX647267.1" FT CDS complement(join(31035820..31035825,31036675..31036849, FT 31037344..31037489,31037668..31037817)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-003" FT /standard_name="OTTHUMP00000018198" FT /product="high-mobility group box 1" FT /protein_id="CAI15603.1" FT /translation="MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKC FT SERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL FT FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKF" FT CDS complement(join(<31037348..31037489,31037668..31037817)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-005" FT /standard_name="OTTHUMP00000018200" FT /product="high-mobility group box 1" FT /protein_id="CAI15606.1" FT /translation="MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKC FT SERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR" FT mRNA complement(join(31033987..31035670,31036675..31036849, FT 31037344..31037489,31037668..31037831,31038298..31038447)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-001" FT /product="high-mobility group box 1" FT /note="match: ESTs: Em:AV763680 Em:BG484614 Em:BM706558" FT mRNA complement(join(<31035621..31035670,31036709..31036849, FT 31037344..31037489,31037668..31037831,31038305..31038447)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-002" FT /product="high-mobility group box 1" FT /note="match: ESTs: Em:BG912555 Em:BM510385 Em:BQ477781" FT misc_feature 31038851..31039481 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(31035044..31035670,31036675..31036849, FT 31037344..31037489,31037668..31037831,31039210..31039379)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-011" FT /product="high-mobility group box 1" FT /note="match: cDNAs: Em:CR625918.1" FT mRNA complement(join(31033987..31035670,31036675..31036849, FT 31037344..31037489,31037668..31037831,31039933..31040102)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-004" FT /product="high-mobility group box 1" FT /note="match: ESTs: Em:AA430980.1 Em:BY795027.2" FT /note="match: cDNAs: Em:AB168615.1 Em:CR591935.1 FT Em:CR600442.1 Em:CR608517.1" FT mRNA complement(join(31033990..31035670,31036675..31036849, FT 31037344..31037435,31037687..31037831,31039933..31040036)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-010" FT /product="high-mobility group box 1" FT /note="match: cDNAs: Em:AK057120.1" FT mRNA complement(join(31035633..31035825,31036675..31036849, FT 31037344..31037489,31037668..31037831,31039933..31040075)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-003" FT /product="high-mobility group box 1" FT /note="match: ESTs: Em:BG535387" FT mRNA complement(join(31037448..31037831,31039933..31040051)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-007" FT /product="high-mobility group box 1" FT /note="match: ESTs: Em:AA355829 Em:AV761174 Em:BG942913 FT Em:BM151735" FT mRNA complement(join(<31037348..31037489,31037668..31037831, FT 31040503..31040651)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-005" FT /product="high-mobility group box 1" FT /note="match: ESTs: Em:AV662496" FT misc_feature 31046138..31046221 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 31054409 FT /note="Clone_right_end: RP11-223E19" FT mRNA complement(join(31032884..31035670,31036675..31036849, FT 31037344..31037489,31037668..31037831, FT AL138681.17:42180..43106)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-012" FT /product="high-mobility group box 1" FT misc_feature 31093081 FT /note="Clone_left_end: RP11-121O19" FT misc_feature 31108674..31108684 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS complement(31115780..31117034) FT /pseudo FT /locus_tag="RP11-550P23.4-001" FT /product="microfibrillar-associated protein 1 (MFAP1) FT pseudogene" FT /note="match: proteins: Sw:P55080 Sw:P55081 Sw:Q9CQU1" FT CDS complement(join(31113734..31115102,31117154..31117598)) FT /pseudo FT /locus_tag="RP11-550P23.3-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q22412 Tr:Q93XZ5 Tr:Q95RB1 FT Tr:Q9CXA0 Tr:Q9FL40 Tr:Q9LNV5 Tr:Q9NW64 Tr:Q9ZW36" FT CDS 31127807..31128830 FT /pseudo FT /locus_tag="RP11-550P23.5-001" FT /product="protein tyrosine phosphatase, non-receptor type 2 FT (PTPN2) pseudogene" FT /note="match: proteins: Sw:O02695 Sw:P10586 Sw:P17706 FT Sw:P18031 Sw:P18052 Sw:P20417 Sw:P23467 Sw:P28827 Sw:P28828 FT Sw:P29350 Sw:P34138 Sw:P35821 Sw:P35832 Sw:P35992 Sw:P54637 FT Sw:Q12913 Sw:Q15678 Sw:Q16827 Sw:Q62728 Sw:Q6PB44 Sw:Q99M80 FT Tr:O44329 Tr:P91345 Tr:Q24495 Tr:Q28613 Tr:Q60986 Tr:Q61042 FT Tr:Q62797 Tr:Q64604 Tr:Q90YJ4 Tr:Q91556 Tr:Q91870 Tr:Q91871 FT Tr:Q96AU5 Tr:Q96IA0 Tr:Q9EQ17 Tr:Q9ERM5 Tr:Q9IAJ0 Tr:Q9IB94 FT Tr:Q9JJ07 Tr:Q9JLU0 Tr:Q9N4H5 Tr:Q9NL06 Tr:Q9NL14 Tr:Q9PUM2 FT Tr:Q9QW67 Tr:Q9V7K0 Tr:Q9VJ95 Tr:Q9W323 Tr:Q9W6V5 FT Tr:Q9Y406" FT polyA_signal 31129593..31129598 FT misc_feature 31150628 FT /note="Clone_right_end: RP11-550P23" FT misc_feature 31150629..31274890 FT /note="annotated region of clone" FT misc_feature 31169562..31169710 FT /note="Sequence from clone PCR only" FT mRNA complement(join(AL353648.27:16123..18909, FT AL353648.27:19914..20088,AL353648.27:20583..20728, FT AL353648.27:20907..21070,31190808..31191734)) FT /gene="HMGB1" FT /locus_tag="RP11-550P23.1-012" FT /product="high-mobility group box 1" FT mRNA join(31191830..31192193,31195901..31196029, FT 31204972..31205611) FT /gene="USPL1" FT /locus_tag="RP11-121O19.1-002" FT /product="ubiquitin specific peptidase like 1" FT /note="match: ESTs: Em:AL700779 Em:BI752017 Em:BM478607 FT Em:BM921002" FT mRNA join(31191920..31192193,31195210..31195376, FT 31195901..31196029,31204972..31205611,31211881..31211994, FT 31216765..31216894,31221069..31221194,31227285..31227442, FT 31231611..31233686) FT /gene="USPL1" FT /locus_tag="RP11-121O19.1-001" FT /product="ubiquitin specific peptidase like 1" FT /note="match: ESTs: Em:BG717478.1 Em:CN291824.1 FT Em:DA174047.1 Em:DA803709.1" FT /note="match: cDNAs: Em:BC012594.1 Em:BC036027.1 FT Em:BC038103.2 Em:X59131.1" FT CDS join(31195278..31195376,31195901..31196029, FT 31204972..31205611,31211881..31211994,31216765..31216894, FT 31221069..31221194,31227285..31227442,31231611..31233493) FT /gene="USPL1" FT /locus_tag="RP11-121O19.1-001" FT /standard_name="OTTHUMP00000018203" FT /product="ubiquitin specific peptidase like 1" FT /note="match: proteins: Sw:Q5W0Q7.1 Tr:Q14109.3 Tr:Q8IY30.1 FT Tr:Q8IYE8.1" FT /protein_id="CAH70264.1" FT /translation="MMDSPKIGNGLPVIGPGTDIGISSLHMVGYLGKNFDSAKVPSDEY FT CPACREKGKLKALKTYRISFQESIFLCEDLQCIYPLGSKSLNNLISPDLEECHTPHKPQ FT KRKSLESSYKDSLLLANSKKTRNYIAIDGGKVLNSKHNGEVYDETSSNLPDSSGQQNPI FT RTADSLERNEILEADTVDMATTKDPATVDVSGTGRPSPQNEGCTSKLEMPLESKCTSFP FT QALCVQWKNAYALCWLDCILSALVHSEELKNTVTGLCSKEESIFWRLLTKYNQANTLLY FT TSQLSGVKDGDCKKLTSEIFAEIETCLNEVRDEIFISLQPQLRCTLGDMESPVFAFPLL FT LKLETHIEKLFLYSFSWDFECSQCGHQYQNRHMKSLVTFTNVIPEWHPLNAAHFGPCNN FT CNSKSQIRKMVLEKVSPIFMLHFVEGLPQNDLQHYAFHFEGCLYQITSVIQYRANNHFI FT TWILDADGSWLECDDLKGPCSERHKKFEVPASEIHIVIWERKISQVTDKEAACLPLKKT FT NDQHALSNEKPVSLTSCSVGDAASAETASVTHPKDISVAPRTLSQDTAVTHGDHLLSGP FT KGLVDNILPLTLEETIQKTASVSQLNSEAFLLENKPVAENTGILKTNTLLSQESLMASS FT VSAPCNEKLIQDQFVDISFPSQVVNTNMQSVQLNTEDTVNTKSVNNTDATGLIQGVKSV FT EIEKDAQLKQFLTPKTEQLKPERVTSQVSNLKKKETTADSQTTTSKSLQNQSLKENQKK FT PFVGSWVKGLISRGASFMPLCVSAHNRNTITDLQPSVKGVNNFGGFKTKGINQKASHVS FT KKARKSASKPPPISKPPAGPPSSNGTAAHPHAHAASEVLEKSGSTSCGAQLNHSSYGNG FT ISSANHEDLVEGQIHKLRLKLRKKLKAEKKKLAALMSSPQSRTVRSENLEQVPQDGSPN FT DCESIEDLLNELPYPIDIASESACTTVPGVSLYSSQTHEEILAELLSPTPVSTELSENG FT EGDFRYLGMGDSHIPPPVPSEFNDVSQNTHLRQDHNYCSPTKKNPCEVQPDSLTNNACV FT RTLNLESPMKTDIFDEFFSSSALNALANDTLDLPHFDEYLFENY" FT misc_feature 31201682 FT /note="Clone_left_end: RP11-469L23" FT polyA_signal 31233424..31233429 FT polyA_signal 31233667..31233672 FT polyA_site 31233686 FT misc_feature 31272890 FT /note="Clone_right_end: RP11-121O19" FT misc_feature 31274891..31412145 FT /note="annotated region of clone" FT misc_feature 31284620..31284625 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(31309645..31309812,31318197..31318296, FT 31326189..31326259,31330081..31330162,31338081..31338556) FT /gene="ALOX5AP" FT /locus_tag="RP11-469L23.1-001" FT /product="arachidonate 5-lipoxygenase-activating protein" FT /note="match: ESTs: Em:AL559359.3 Em:BG569867.1" FT /note="match: cDNAs: Em:AB220429.1 Em:BC018538.1 FT Em:X52195.1" FT CDS join(31309743..31309812,31318197..31318296, FT 31326189..31326259,31330081..31330162,31338081..31338243) FT /gene="ALOX5AP" FT /locus_tag="RP11-469L23.1-001" FT /standard_name="OTTHUMP00000018204" FT /product="arachidonate 5-lipoxygenase-activating protein" FT /note="match: proteins: Sw:P20291.1 Sw:P20292.2 Sw:P30355.2 FT Sw:Q2PG08.1 Tr:Q5RJL3.1" FT /protein_id="CAH74084.1" FT /translation="MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRT FT GTLAFERVYTANQNCVDAYPTFLAVLWSAGLLCSQVPAAFAGLMYLFVRQKYFVGYLGE FT RTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFGSDFENYIKTISTTISPLLLIP" FT misc_feature 31311070..31311132 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA join(31316473..31316682,31318197..31318533) FT /gene="ALOX5AP" FT /locus_tag="RP11-469L23.1-002" FT /product="arachidonate 5-lipoxygenase-activating protein" FT /note="match: ESTs: Em:BF892107 Em:BF892870" FT polyA_signal 31338534..31338539 FT polyA_site 31338563 FT mRNA join(31377343..31377729,31384264..31384782) FT /locus_tag="RP11-469L23.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI818416 Em:BI818490" FT misc_feature 31404933..31405076 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 31404944..31404953 FT /note="Single clone region. Sequence from uni-directional FT dGTP big dye terminator reads only" FT misc_feature 31410145 FT /note="Clone_right_end: RP11-469L23" FT misc_feature 31414294..31414330 FT /note="Single clone region" FT misc_feature 31414381..31414674 FT /note="Single clone region" FT misc_feature 31415137..31415142 FT /note="Single clone region" FT misc_feature 31415297..31415303 FT /note="Single clone region" FT misc_feature 31416143..31416482 FT /note="Single clone region" FT misc_feature 31416483 FT /note="Tandem repeat. Forced join. No restriction digest FT data available for estimating gap size" FT misc_feature 31416484..31416527 FT /note="Single clone region" FT misc_feature 31416723..31416754 FT /note="Single clone region" FT misc_feature 31416755..31416808 FT /note="Single clone region. Sequence from a single read FT sequenced with dGTP big dye terminator" FT misc_feature 31416809..31416917 FT /note="Single clone region. Sequence from uni-directional FT dGTP big dye terminator reads only" FT misc_feature 31419395..31419437 FT /note="Single clone region" FT misc_feature 31419517..31419812 FT /note="Single clone region" FT misc_feature 31419814 FT /note="Clone_left_end: WI2-82855E9" FT misc_feature 31419879..31420006 FT /note="Sequence from overlapping clone fW82855E9 FT (BX510662)" FT misc_feature 31428059..31604988 FT /note="annotated region of clone" FT misc_feature 31428059 FT /note="Clone_left_end: RP11-252M21" FT mRNA join(31456688..31456796,31457231..31457532) FT /locus_tag="RP11-252M21.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA514237 Em:AA723332 Em:AA962462 FT Em:AI335021 Em:AW971988 Em:AW971998 Em:BG181812 Em:BG199437 FT Em:BG199438 Em:BG199952 Em:BG216047 Em:BG220295" FT polyA_signal 31457510..31457515 FT polyA_site 31457529 FT mRNA join(31480328..31480930,31491540..31491649, FT 31495151..31495263,31495698..31495983,31498448..31499709) FT /locus_tag="RP11-252M21.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:BM725076.1 Em:BX378017.2" FT /note="match: cDNAs: Em:AK055635.1 Em:BC040165.1 FT Em:BC101624.1 Em:BC101626.1" FT CDS join(31480653..31480930,31491540..31491649, FT 31495151..31495263,31495698..31495983,31498448..31498572) FT /locus_tag="RP11-252M21.2-001" FT /standard_name="OTTHUMP00000018205" FT /product="novel protein" FT /note="match: proteins: Sw:Q5VYS4.1 Tr:Q8BFY2.1 FT Tr:Q96NC8.1" FT /protein_id="CAH71733.1" FT /translation="MAGAACEPVARPSLTSISSGELRSLWTCDCELALLPLAQLLRLQP FT GAFQLSGDQLVVARPGEPAAARGGFNVFGDGLVRLDGQLYRLSSYIKRYVELTNYCDYK FT DYRETILSKPMLFFINVQTKKDTSKERTYAFLVNTRHPKIRRQIEQGMDMVISSVIGES FT YRLQFDFQEAVKNFFPPGNEVVNGENLSFAYEFKADALFDFFYWFGLSNSVVKVNGKVL FT NLSSTSPEKKETIKLFLEKMSEPLIRRSSFSDRKFSVTSRGSIDDVFNCNLSPRSSLTE FT PLLAELPFPSVLESEETPNQFI" FT CDS join(<31480843..31480930,31491540..31491649, FT 31495151..31495263,31498448..31498456) FT /codon_start=3 FT /locus_tag="RP11-252M21.2-002" FT /standard_name="OTTHUMP00000018206" FT /product="novel protein" FT /protein_id="CAH71734.1" FT /translation="AARGGFNVFGDGLVRLDGQLYRLSSYIKRYVELTNYCDYKDYRET FT ILSKPMLFFINVQTKKDTSKERTYAFLVNTRHPKIRRQIEQGMDMVISSVIGESYRLQV FT Q" FT mRNA join(<31480843..31480930,31491540..31491649, FT 31495151..31495263,31498448..31498586) FT /locus_tag="RP11-252M21.2-002" FT /product="novel protein" FT /note="match: ESTs: Em:AI030497" FT polyA_signal 31499686..31499691 FT polyA_site 31499709 FT mRNA complement(join(31504814..31505011,31505383..31505619)) FT /locus_tag="RP11-252M21.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW661841" FT mRNA complement(join(31505766..31506073,31506246..31506337)) FT /locus_tag="RP11-252M21.4-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI809997" FT mRNA complement(join(31505638..31506073,31506413..31506723)) FT /locus_tag="RP11-252M21.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG718883" FT mRNA join(31506840..31506913,31507146..31507327) FT /gene="C13orf26" FT /locus_tag="RP11-252M21.5-002" FT /product="chromosome 13 open reading frame 26" FT /note="match: ESTs: Em:AA382788" FT mRNA join(31506840..31506913,31513831..31513915, FT 31526797..31526962,31531010..31531166,31540359..31540535, FT 31543022..31543183,31548983..31549639) FT /gene="C13orf26" FT /locus_tag="RP11-252M21.5-001" FT /product="chromosome 13 open reading frame 26" FT /note="match: ESTs: Em:BG217246.1 Em:BI827089.1 FT Em:CD705608.1" FT /note="match: cDNAs: Em:BC030277.1" FT CDS join(31506853..31506913,31513831..31513915, FT 31526797..31526962,31531010..31531166,31540359..31540535, FT 31543022..31543183,31548983..31549044) FT /gene="C13orf26" FT /locus_tag="RP11-252M21.5-001" FT /standard_name="OTTHUMP00000018207" FT /product="chromosome 13 open reading frame 26" FT /note="match: proteins: Sw:Q8N6G2.1" FT /protein_id="CAH71735.1" FT /translation="MEQPGPRAPDPSLCHHNLQPTDDPNWDSYATTMRTAFTPKTGAVP FT ALIRQNGIRRLGYTYSLSDPILNQTQYSDEYTWKSHSKEDLIKTETSRGIKSHKSHLNE FT DIFLWTLPHCQQTGTLKNCLPWKIPASMKEVNKALSNQFISLTKRDFVDRSKAQKIKKS FT SHLSLEWKKLLPQPPDTEFRRNYQIPAKIPELQDFSFKYGCYSSLPVASQGLVPSVLHS FT YLRNQEHTKKQTTYQSDYDKTYPDFLMLLNSFTSSQVKEYLQSLSYKDRQIIDRFIRTH FT CDTNKKKK" FT misc_feature 31508366 FT /note="Clone_left_end: RP11-64I8" FT polyA_signal 31549618..31549623 FT polyA_site 31549639 FT mRNA complement(join(31547426..31547618,31548945..31549024, FT 31551697..31551760)) FT /locus_tag="RP11-252M21.6-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI850973" FT mRNA complement(join(31569299..31569612,31570191..31570275)) FT /locus_tag="RP11-252M21.7-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA644401" FT misc_feature 31577739..31577768 FT /note="Sequence from overlapping clone bA64I8 (AL158065) FT only. Assembly confirmed by restriction digest" FT misc_feature 31577761..31577768 FT /note="Single clone region. Assembly confirmed by FT restriction digest" FT misc_feature 31604988 FT /note="Clone_right_end: RP11-252M21" FT misc_feature 31604989..31673189 FT /note="annotated region of clone" FT misc_feature 31608334 FT /note="Clone_left_end: RP11-173P16" FT CDS join(31651391..31651453,31653824..31653988, FT 31663420..31663521,31667111..31667206,AL137142.20:149..199, FT AL137142.20:1219..1264,AL137142.20:2773..2830, FT AL137142.20:6043..6172,AL137142.20:12793..12850, FT AL137142.20:13126..13252,AL137142.20:14896..14920, FT AL137142.20:15532..15586,AL137142.20:16642..16747) FT /pseudo FT /locus_tag="RP11-173P16.2-001" FT /product="novel pseudogene similar to 4930434E21Rik" FT /note="match: proteins: Tr:Q8BN84.1 Tr:Q9D5I8" FT misc_feature 31673089 FT /note="Clone_right_end: RP11-64I8" FT misc_feature 31673190..31786939 FT /note="annotated region of clone" FT polyA_signal complement(31710788..31710793) FT polyA_site complement(31711101) FT polyA_signal complement(31711123..31711128) FT mRNA complement(join(31710762..31711254,31711505..31711661, FT 31712544..>31712705)) FT /gene="HSPH1" FT /locus_tag="RP11-173P16.1-004" FT /product="heat shock 105kDa/110kDa protein 1" FT /note="match: ESTs: Em:AI337175 Em:AL520323 Em:AU133342 FT Em:BE672159 Em:BM971288 Em:BM983480" FT CDS complement(join(31711226..31711254,31711505..31711661, FT 31712544..>31712705)) FT /codon_start=1 FT /gene="HSPH1" FT /locus_tag="RP11-173P16.1-004" FT /standard_name="OTTHUMP00000018211" FT /product="heat shock 105kDa/110kDa protein 1" FT /protein_id="CAI12425.1" FT /translation="DEKYNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKKSLDQDPVVR FT AQEIKTKIKELNNTCEPVVTQPKPKIESPKLERTPNGPNIDKKEEDLEDKNNFGAEPPH FT QNDSCGIVNSY" FT mRNA complement(join(31712676..31712705,31712917..31713037, FT 31713137..31713319)) FT /gene="HSPH1" FT /locus_tag="RP11-173P16.1-005" FT /product="heat shock 105kDa/110kDa protein 1" FT /note="match: ESTs: Em:F07487 Em:F08794" FT CDS join(AL158065.7:46503..46565,AL158065.7:48936..49100, FT AL158065.7:58532..58633,AL158065.7:62223..62318, FT 31673238..31673288,31674308..31674353,31675862..31675919, FT 31679132..31679261,31685882..31685939,31686215..31686341, FT 31687985..31688009,31688621..31688675,31689731..31689836) FT /pseudo FT /locus_tag="RP11-173P16.2-001" FT /product="novel pseudogene similar to 4930434E21Rik" FT /note="match: proteins: Tr:Q8BN84.1 Tr:Q9D5I8" FT misc_feature 31726682 FT /note="Clone_left_end: RP11-367C11" FT mRNA complement(join(31710765..31711661,31712544..31712705, FT 31712918..31713037,31713137..31713244,31714321..31714446, FT 31715259..31715396,31717929..31718060,31719700..31719905, FT 31722096..31722229,31722511..31722617,31724091..31724319, FT 31725084..31725328,31725746..31725879,31726989..31727088, FT 31728770..31728892,31729651..31729791,31732943..31733000, FT 31735613..31736064)) FT /gene="HSPH1" FT /locus_tag="RP11-173P16.1-001" FT /product="heat shock 105kDa/110kDa protein 1" FT /note="match: ESTs: Em:BG532824.1 Em:BG681493.1 FT Em:BU167787.1 Em:CN406506.1 Em:DB099935.1" FT /note="match: cDNAs: Em:AB003334.1 Em:BC037553.1 FT Em:D86956.1" FT CDS complement(join(31711455..31711661,31712544..31712705, FT 31712918..31713037,31713137..31713244,31714321..31714446, FT 31715259..31715396,31717929..31718060,31719700..31719905, FT 31722096..31722229,31722511..31722617,31724091..31724319, FT 31725084..31725328,31725746..31725879,31726989..31727088, FT 31728770..31728892,31729651..31729791,31732943..31733000, FT 31735613..31735719)) FT /gene="HSPH1" FT /locus_tag="RP11-173P16.1-001" FT /standard_name="OTTHUMP00000018208" FT /product="heat shock 105kDa/110kDa protein 1" FT /note="match: proteins: Sw:Q5R606.1 Sw:Q60446.1 Sw:Q66HA8.1 FT Sw:Q92598.1" FT /protein_id="CAI12430.1" FT /translation="MSVVGLDVGSQSCYIAVARAGGIETIANEFSDRCTPSVISFGSKN FT RTIGVAAKNQQITHANNTVSNFKRFHGRAFNDPFIQKEKENLSYDLVPLKNGGVGIKVM FT YMGEEHLFSVEQITAMLLTKLKETAENSLKKPVTDCVISVPSFFTDAERRSVLDAAQIV FT GLNCLRLMNDMTAVALNYGIYKQDLPSLDEKPRIVVFVDMGHSAFQVSACAFNKGKLKV FT LGTAFDPFLGGKNFDEKLVEHFCAEFKTKYKLDAKSKIRALLRLYQECEKLKKLMSSNS FT TDLPLNIECFMNDKDVSGKMNRSQFEELCAELLQKIEVPLYSLLEQTHLKVEDVSAVEI FT VGGATRIPAVKERIAKFFGKDISTTLNADEAVARGCALQCAILSPAFKVREFSVTDAVP FT FPISLIWNHDSEDTEGVHEVFSRNHAAPFSKVLTFLRRGPFELEAFYSDPQGVPYPEAK FT IGRFVVQNVSAQKDGEKSRVKVKVRVNTHGIFTISTASMVEKVPTEENEMSSEADMECL FT NQRPPENPDTDKNVQQDNSEAGTQPQVQTDAQQTSQSPPSPELTSEENKIPDADKANEK FT KVDQPPEAKKPKIKVVNVELPIEANLVWQLGKDLLNMYIETEGKMIMQDKLEKERNDAK FT NAVEEYVYEFRDKLCGPYEKFICEQDHQNFLRLLTETEDWLYEEGEDQAKQAYVDKLEE FT LMKIGTPVKVRFQEAEERPKMFEELGQRLQHYAKIAADFRNKDEKYNHIDESEMKKVEK FT SVNEVMEWMNNVMNAQAKKSLDQDPVVRAQEIKTKIKELNNTCEPVVTQPKPKIESPKL FT ERTPNGPNIDKKEEDLEDKNNFGAEPPHQNGECYPNEKNSVNMDLD" FT mRNA complement(join(31710765..31711661,31712544..31712705, FT 31712918..31713037,31713137..31713244,31714321..31714446, FT 31715259..31715396,31719700..31719905,31722096..31722229, FT 31722511..31722617,31724091..31724319,31725084..31725328, FT 31725746..31725879,31726989..31727088,31728770..31728892, FT 31729651..31729791,31732943..31733000,31735613..31736064)) FT /gene="HSPH1" FT /locus_tag="RP11-173P16.1-002" FT /product="heat shock 105kDa/110kDa protein 1" FT /note="match: cDNAs: Em:AB003333.1" FT CDS complement(join(31711455..31711661,31712544..31712705, FT 31712918..31713037,31713137..31713244,31714321..31714446, FT 31715259..31715396,31719700..31719905,31722096..31722229, FT 31722511..31722617,31724091..31724319,31725084..31725328, FT 31725746..31725879,31726989..31727088,31728770..31728892, FT 31729651..31729791,31732943..31733000,31735613..31735719)) FT /gene="HSPH1" FT /locus_tag="RP11-173P16.1-002" FT /standard_name="OTTHUMP00000018209" FT /product="heat shock 105kDa/110kDa protein 1" FT /protein_id="CAI12428.1" FT /translation="MSVVGLDVGSQSCYIAVARAGGIETIANEFSDRCTPSVISFGSKN FT RTIGVAAKNQQITHANNTVSNFKRFHGRAFNDPFIQKEKENLSYDLVPLKNGGVGIKVM FT YMGEEHLFSVEQITAMLLTKLKETAENSLKKPVTDCVISVPSFFTDAERRSVLDAAQIV FT GLNCLRLMNDMTAVALNYGIYKQDLPSLDEKPRIVVFVDMGHSAFQVSACAFNKGKLKV FT LGTAFDPFLGGKNFDEKLVEHFCAEFKTKYKLDAKSKIRALLRLYQECEKLKKLMSSNS FT TDLPLNIECFMNDKDVSGKMNRSQFEELCAELLQKIEVPLYSLLEQTHLKVEDVSAVEI FT VGGATRIPAVKERIAKFFGKDISTTLNADEAVARGCALQCAILSPAFKVREFSVTDAVP FT FPISLIWNHDSEDTEGVHEVFSRNHAAPFSKVLTFLRRGPFELEAFYSDPQGVPYPEAK FT IGRFVVQNVSAQKDGEKSRVKVKVRVNTHGIFTISTASMVEKVPTEENEMSSEADMECL FT NQRPPENPDTDANEKKVDQPPEAKKPKIKVVNVELPIEANLVWQLGKDLLNMYIETEGK FT MIMQDKLEKERNDAKNAVEEYVYEFRDKLCGPYEKFICEQDHQNFLRLLTETEDWLYEE FT GEDQAKQAYVDKLEELMKIGTPVKVRFQEAEERPKMFEELGQRLQHYAKIAADFRNKDE FT KYNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKKSLDQDPVVRAQEIKTKIKELNNTCE FT PVVTQPKPKIESPKLERTPNGPNIDKKEEDLEDKNNFGAEPPHQNGECYPNEKNSVNMD FT LD" FT mRNA complement(join(31710765..31711661,31712544..31712705, FT 31712918..31713037,31713137..31713244,31714321..31714446, FT 31715259..31715396,31717929..31718060,31719700..31719905, FT 31722096..31722229,31722511..31722617,31724091..31724319, FT 31725084..31725328,31725746..31725879,31726989..31727088, FT 31729651..31729791,31732943..31733000,31735613..31736064)) FT /gene="HSPH1" FT /locus_tag="RP11-173P16.1-003" FT /product="heat shock 105kDa/110kDa protein 1" FT /note="match: ESTs: Em:BE887616" FT /note="match: cDNAs: Em:BC018124" FT CDS complement(join(31711455..31711661,31712544..31712705, FT 31712918..31713037,31713137..31713244,31714321..31714446, FT 31715259..31715396,31717929..31718060,31719700..31719905, FT 31722096..31722229,31722511..31722617,31724091..31724319, FT 31725084..31725328,31725746..31725879,31726989..31727088, FT 31729651..31729791,31732943..31733000,31735613..31735719)) FT /gene="HSPH1" FT /locus_tag="RP11-173P16.1-003" FT /standard_name="OTTHUMP00000018210" FT /product="heat shock 105kDa/110kDa protein 1" FT /protein_id="CAI12429.1" FT /translation="MSVVGLDVGSQSCYIAVARAGGIETIANEFSDRCTPSVISFGSKN FT RTIGVAAKNQQITHANNTVSNFKRFHGRAFNDPFIQKEKENLSYDLVPLKNGGVGIKVP FT SFFTDAERRSVLDAAQIVGLNCLRLMNDMTAVALNYGIYKQDLPSLDEKPRIVVFVDMG FT HSAFQVSACAFNKGKLKVLGTAFDPFLGGKNFDEKLVEHFCAEFKTKYKLDAKSKIRAL FT LRLYQECEKLKKLMSSNSTDLPLNIECFMNDKDVSGKMNRSQFEELCAELLQKIEVPLY FT SLLEQTHLKVEDVSAVEIVGGATRIPAVKERIAKFFGKDISTTLNADEAVARGCALQCA FT ILSPAFKVREFSVTDAVPFPISLIWNHDSEDTEGVHEVFSRNHAAPFSKVLTFLRRGPF FT ELEAFYSDPQGVPYPEAKIGRFVVQNVSAQKDGEKSRVKVKVRVNTHGIFTISTASMVE FT KVPTEENEMSSEADMECLNQRPPENPDTDKNVQQDNSEAGTQPQVQTDAQQTSQSPPSP FT ELTSEENKIPDADKANEKKVDQPPEAKKPKIKVVNVELPIEANLVWQLGKDLLNMYIET FT EGKMIMQDKLEKERNDAKNAVEEYVYEFRDKLCGPYEKFICEQDHQNFLRLLTETEDWL FT YEEGEDQAKQAYVDKLEELMKIGTPVKVRFQEAEERPKMFEELGQRLQHYAKIAADFRN FT KDEKYNHIDESEMKKVEKSVNEVMEWMNNVMNAQAKKSLDQDPVVRAQEIKTKIKELNN FT TCEPVVTQPKPKIESPKLERTPNGPNIDKKEEDLEDKNNFGAEPPHQNGECYPNEKNSV FT NMDLD" FT mRNA join(31774073..31774291,AL138965.10:2349..2398, FT AL138965.10:10250..10289,AL138965.10:16483..16592, FT AL138965.10:34321..34397,AL138965.10:35153..35264, FT AL138965.10:48244..48380,AL138965.10:56512..56575, FT AL138965.10:61807..61926,AL138965.10:64000..64069, FT AL138965.10:71946..72059,AL138965.10:74018..74117, FT AL138965.10:104864..104983,AL138965.10:111049..111193, FT AL138965.10:116799..119574) FT /gene="B3GALTL" FT /locus_tag="RP11-367C11.1-001" FT /product="beta 1,3-galactosyltransferase-like" FT /note="match: ESTs: Em:BM847533.1 Em:BQ888580.1 FT Em:CN261523.1 Em:DA735912.1 Em:DN999521.1" FT /note="match: cDNAs: Em:AY190526.1 Em:BC068595.1" FT CDS join(31774222..31774291,AL138965.10:2349..2398, FT AL138965.10:10250..10289,AL138965.10:16483..16592, FT AL138965.10:34321..34397,AL138965.10:35153..35264, FT AL138965.10:48244..48380,AL138965.10:56512..56575, FT AL138965.10:61807..61926,AL138965.10:64000..64069, FT AL138965.10:71946..72059,AL138965.10:74018..74117, FT AL138965.10:104864..104983,AL138965.10:111049..111193, FT AL138965.10:116799..116966) FT /gene="B3GALTL" FT /locus_tag="RP11-367C11.1-001" FT /standard_name="OTTHUMP00000018218" FT /product="beta 1,3-galactosyltransferase-like" FT /note="match: proteins: Tr:Q6NUI3.1 Tr:Q6Y288.1" FT /protein_id="CAI12432.2" FT /translation="MRPPACWWLLAPPALLALLTCSLAFGLASEDTKKEVKQSQDLEKS FT GISRKNDIDLKGIVFVIQSQSNSFHAKRAEQLKKSILKQAADLTQELPSVLLLHQLAKQ FT EGAWTILPLLPHFSVTYSRNSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHD FT EEATIIHHYAFSENPTVFKYPDFAAGWALSIPLVNKLTKRLKSESLKSDFTIDLKHEIA FT LYIWDKGGGPPLTPVPEFCTNDVDFYCATTFHSFLPLCRKPVKKKDIFVAVKTCKKFHG FT DRIPIVKQTWESQASLIEYYSDYTENSIPTVDLGIPNTDRGHCGKTFAILERFLNRSQD FT KTAWLVIVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLGTGGYSYITGGGGMVFS FT REAVRRLLASKCRCYSNDAPDDMVLGMCFSGLGIPVTHSPLFHQARPVDYPKDYLSHQV FT PISFHKHWNIDPVKVYFTWLAPSDEDKARQETQKGFREEL" FT misc_feature 31774280..31774324 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 31786839 FT /note="Clone_right_end: RP11-173P16" FT misc_feature 31786940..31924998 FT /note="annotated region of clone" FT mRNA join(31834544..31834617,31835083..31835219, FT 31843351..31843414,31848646..31848765,31850839..31850908, FT 31857206..31857443,31858814..31858892) FT /gene="B3GALTL" FT /locus_tag="RP11-367C11.1-002" FT /product="beta 1,3-galactosyltransferase-like" FT /note="match: ESTs: Em:BI460175 Em:BI829955" FT misc_feature 31844723 FT /note="Clone_left_end: RP11-42I11" FT CDS join(31885426..31885789,31886473..31887058) FT /pseudo FT /locus_tag="RP11-367C11.2-001" FT /product="seudogene similar to part of ankyrin repeat FT domain 26 ANKRD26" FT /note="match: proteins: Sw:Q9UPS8 Tr:O60311" FT mRNA join(AL137142.20:100984..101202,31789188..31789237, FT 31797089..31797128,31803322..31803431,31821160..31821236, FT 31821992..31822103,31835083..31835219,31843351..31843414, FT 31848646..31848765,31850839..31850908,31858785..31858898, FT 31860857..31860956,31891703..31891822,31897888..31898032, FT 31903638..31906413) FT /gene="B3GALTL" FT /locus_tag="RP11-367C11.1-001" FT /product="beta 1,3-galactosyltransferase-like" FT /note="match: cDNAs: Em:AY190526.1 Em:BC068595.1" FT /note="match: ESTs: Em:BM847533.1 Em:BQ888580.1 FT Em:CN261523.1 Em:DA735912.1 Em:DN999521.1" FT CDS join(AL137142.20:101133..101202,31789188..31789237, FT 31797089..31797128,31803322..31803431,31821160..31821236, FT 31821992..31822103,31835083..31835219,31843351..31843414, FT 31848646..31848765,31850839..31850908,31858785..31858898, FT 31860857..31860956,31891703..31891822,31897888..31898032, FT 31903638..31903805) FT /gene="B3GALTL" FT /locus_tag="RP11-367C11.1-001" FT /standard_name="OTTHUMP00000018218" FT /product="beta 1,3-galactosyltransferase-like" FT /note="match: proteins: Tr:Q6NUI3.1 Tr:Q6Y288.1" FT /protein_id="CAH73049.2" FT /translation="MRPPACWWLLAPPALLALLTCSLAFGLASEDTKKEVKQSQDLEKS FT GISRKNDIDLKGIVFVIQSQSNSFHAKRAEQLKKSILKQAADLTQELPSVLLLHQLAKQ FT EGAWTILPLLPHFSVTYSRNSSWIFFCEEETRIQIPKLLETLRRYDPSKEWFLGKALHD FT EEATIIHHYAFSENPTVFKYPDFAAGWALSIPLVNKLTKRLKSESLKSDFTIDLKHEIA FT LYIWDKGGGPPLTPVPEFCTNDVDFYCATTFHSFLPLCRKPVKKKDIFVAVKTCKKFHG FT DRIPIVKQTWESQASLIEYYSDYTENSIPTVDLGIPNTDRGHCGKTFAILERFLNRSQD FT KTAWLVIVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLGTGGYSYITGGGGMVFS FT REAVRRLLASKCRCYSNDAPDDMVLGMCFSGLGIPVTHSPLFHQARPVDYPKDYLSHQV FT PISFHKHWNIDPVKVYFTWLAPSDEDKARQETQKGFREEL" FT misc_feature 31892889..31892898 FT /note="Sequence from overlapping clone bA42I11 (AL157695). FT Assembly confirmed by restriction digest" FT polyA_signal 31905640..31905645 FT polyA_site 31905659 FT polyA_signal 31906387..31906392 FT polyA_site 31906413 FT misc_feature 31924898 FT /note="Clone_right_end: RP11-367C11" FT misc_feature 31989951 FT /note="Clone_left_end: RP11-326L9" FT misc_feature 32069139 FT /note="Clone_left_end: RP11-67M3" FT misc_feature 32162411 FT /note="Clone_right_end: RP11-326L9" FT misc_feature 32169197 FT /note="Clone_left_end: RP11-95N14" FT misc_feature 32238679 FT /note="Clone_right_end: RP11-67M3" FT misc_feature 32238780..32329403 FT /note="annotated region of clone" FT mRNA join(32313679..32313843,AL138708.17:3092..3238, FT AL138708.17:6558..6635,AL138708.17:9871..9976, FT AL138708.17:10790..10861,AL138708.17:19454..19525, FT AL138708.17:20152..20223,AL138708.17:22210..22281, FT AL138708.17:23346..23417,AL138708.17:26505..26576, FT AL138708.17:27510..27581,AL138708.17:31217..31288, FT AL138708.17:31400..31471,AL138708.17:33956..34027, FT AL138708.17:36640..36869,AL138708.17:37512..37922, FT AL138708.17:42035..42253,AL138708.17:46980..47706) FT /gene="RXFP2" FT /locus_tag="RP11-432E15.1-001" FT /product="relaxin/insulin-like family peptide receptor 2" FT /note="match: cDNAs: Em:AF403384.2 Em:AF453828.1" FT /note="match: ESTs: Em:CN834096.1 Em:CN834140.1 FT Em:CN838755.1" FT CDS join(32313750..32313843,AL138708.17:3092..3238, FT AL138708.17:6558..6635,AL138708.17:9871..9976, FT AL138708.17:10790..10861,AL138708.17:19454..19525, FT AL138708.17:20152..20223,AL138708.17:22210..22281, FT AL138708.17:23346..23417,AL138708.17:26505..26576, FT AL138708.17:27510..27581,AL138708.17:31217..31288, FT AL138708.17:31400..31471,AL138708.17:33956..34027, FT AL138708.17:36640..36869,AL138708.17:37512..37922, FT AL138708.17:42035..42253,AL138708.17:46980..47239) FT /gene="RXFP2" FT /locus_tag="RP11-432E15.1-001" FT /standard_name="OTTHUMP00000018219" FT /product="relaxin/insulin-like family peptide receptor 2" FT /note="match: proteins: Sw:Q8WXD0.1 Tr:Q5W0N7.1" FT /protein_id="CAI17102.1" FT /translation="MIVFLVFKHLFSLRLITMFFLLHFIVLINVKDFALTQGSMITPSC FT QKGYFPCGNLTKCLPRAFHCDGKDDCGNGADEENCGDTSGWATIFGTVHGNANSVALTQ FT ECFLKQYPQCCDCKETELECVNGDLKSVPMISNNVTLLSLKKNKIHSLPDKVFIKYTKL FT KKIFLQHNCIRHISRKAFFGLCNLQILYLNHNCITTLRPGIFKDLHQLTWLILDDNPIT FT RISQRLFTGLNSLFFLSMVNNYLEALPKQMCAQMPQLNWVDLEGNRIKYLTNSTFLSCD FT SLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNTITELSPHLFKDLKLLQKLNLSSNP FT LMYLHKNQFESLKQLQSLDLERIEIPNINTRMFQPMKNLSHIYFKNFRYCSYAPHVRIC FT MPLTDGISSFEDLLANNILRIFVWVIAFITCFGNLFVIGMRSFIKAENTTHAMSIKILC FT CADCLMGVYLFFVGIFDIKYRGQYQKYALLWMESVQCRLMGFLAMLSTEVSVLLLTYLT FT LEKFLVIVFPFSNIRPGKRQTSVILICIWMAGFLIAVIPFWNKDYFGNFYGKNGVCFPL FT YYDQTEDIGSKGYSLGIFLGVNLLAFLIIVFSYITMFCSIQKTALQTTEVRNCFGREVA FT VANRFFFIVFSDAICWIPVFVVKILSLFRVEIPDTMTSWIVIFFLPVNSALNPILYTLT FT TNFFKDKLKQLLHKHQRKSIFKIKKKSLSTSIVWIEDSSSLKLGVLNKITLGDSIMKPV FT S" FT misc_feature 32329204 FT /note="Clone_left_end: RP11-432E15" FT misc_feature 32329404..32445970 FT /note="annotated region of clone" FT misc_feature 32336558..32336950 FT /note="sequence from overlapping clone bA159O9 FT (AL136106).Assembly confirmed by restriction digest" FT misc_feature 32338178..32338188 FT /note="sequence from overlapping clone FT bA159O9(AL136106).Assembly confirmed by restriction digest" FT misc_feature 32340437..32340534 FT /note="sequence from overlapping clone bA159O9 FT (AL136106).Assembly confirmed by restriction digest" FT misc_feature 32341916..32342183 FT /note="sequence from overlapping clone bA159O9 FT (AL136106).Assembly confirmed by restriction digest" FT misc_feature 32342449 FT /note="Clone_right_end: RP11-95N14" FT misc_feature 32342974..32343430 FT /note="sequence from overlapping clone bA159O9 FT (AL136106).Assembly confirmed by restriction digest" FT misc_feature 32378854..32378923 FT /note="sequence from overlapping clone bA159O9 FT (AL136106).Assembly confirmed by restriction digest" FT misc_feature 32390274..32390281 FT /note="sequence form overlapping clone bA159O9 FT (AL136106).Assembly confirmed by restriction digest" FT misc_feature 32391646..32391707 FT /note="sequence from overlapping clone bA159O9 FT (AL136106).Assembly confirmed by restriction digest" FT mRNA join(AL159161.11:75000..75164,32332395..32332541, FT 32335861..32335938,32339174..32339279,32340093..32340164, FT 32348757..32348828,32349455..32349526,32351513..32351584, FT 32352649..32352720,32355808..32355879,32356813..32356884, FT 32360520..32360591,32360703..32360774,32363259..32363330, FT 32365943..32366172,32366815..32367225,32371338..32371556, FT 32376283..32377009) FT /gene="RXFP2" FT /locus_tag="RP11-432E15.1-001" FT /product="relaxin/insulin-like family peptide receptor 2" FT /note="match: cDNAs: Em:AF403384.2 Em:AF453828.1" FT /note="match: ESTs: Em:CN834096.1 Em:CN834140.1 FT Em:CN838755.1" FT CDS join(AL159161.11:75071..75164,32332395..32332541, FT 32335861..32335938,32339174..32339279,32340093..32340164, FT 32348757..32348828,32349455..32349526,32351513..32351584, FT 32352649..32352720,32355808..32355879,32356813..32356884, FT 32360520..32360591,32360703..32360774,32363259..32363330, FT 32365943..32366172,32366815..32367225,32371338..32371556, FT 32376283..32376542) FT /gene="RXFP2" FT /locus_tag="RP11-432E15.1-001" FT /standard_name="OTTHUMP00000018219" FT /product="relaxin/insulin-like family peptide receptor 2" FT /note="match: proteins: Sw:Q8WXD0.1 Tr:Q5W0N7.1" FT /protein_id="CAH73785.1" FT /translation="MIVFLVFKHLFSLRLITMFFLLHFIVLINVKDFALTQGSMITPSC FT QKGYFPCGNLTKCLPRAFHCDGKDDCGNGADEENCGDTSGWATIFGTVHGNANSVALTQ FT ECFLKQYPQCCDCKETELECVNGDLKSVPMISNNVTLLSLKKNKIHSLPDKVFIKYTKL FT KKIFLQHNCIRHISRKAFFGLCNLQILYLNHNCITTLRPGIFKDLHQLTWLILDDNPIT FT RISQRLFTGLNSLFFLSMVNNYLEALPKQMCAQMPQLNWVDLEGNRIKYLTNSTFLSCD FT SLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSSNTITELSPHLFKDLKLLQKLNLSSNP FT LMYLHKNQFESLKQLQSLDLERIEIPNINTRMFQPMKNLSHIYFKNFRYCSYAPHVRIC FT MPLTDGISSFEDLLANNILRIFVWVIAFITCFGNLFVIGMRSFIKAENTTHAMSIKILC FT CADCLMGVYLFFVGIFDIKYRGQYQKYALLWMESVQCRLMGFLAMLSTEVSVLLLTYLT FT LEKFLVIVFPFSNIRPGKRQTSVILICIWMAGFLIAVIPFWNKDYFGNFYGKNGVCFPL FT YYDQTEDIGSKGYSLGIFLGVNLLAFLIIVFSYITMFCSIQKTALQTTEVRNCFGREVA FT VANRFFFIVFSDAICWIPVFVVKILSLFRVEIPDTMTSWIVIFFLPVNSALNPILYTLT FT TNFFKDKLKQLLHKHQRKSIFKIKKKSLSTSIVWIEDSSSLKLGVLNKITLGDSIMKPV FT S" FT mRNA join(32420978..32421076,AC002525.1:69475..69533, FT AC002525.1:74176..74348,AC002525.1:80662..81639) FT /gene="RP1-257C22.1" FT /locus_tag="RP1-257C22.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC021729.1" FT /note="match: ESTs: Em:BI460115.1" FT repeat_region 32449554..32449580 FT /rpt_family="L1" FT repeat_region complement(32451696..32451987) FT /rpt_family="ALU" FT repeat_region 32453919..32454201 FT /rpt_family="ALU" FT repeat_region 32454970..32455658 FT /rpt_family="L1" FT repeat_region 32456653..32456815 FT /rpt_family="L1" FT repeat_region complement(32456949..32457252) FT /rpt_family="ALU" FT repeat_region 32457254..32457542 FT /rpt_family="ALU" FT repeat_region complement(32457551..32457622) FT /rpt_family="ALU" FT repeat_region 32458172..32458212 FT /rpt_family="L1" FT repeat_region complement(32463248..32463539) FT /rpt_family="ALU" FT repeat_region 32463566..32463607 FT /rpt_family="MER" FT repeat_region complement(32463686..32463705) FT /rpt_family="L1" FT repeat_region complement(32463756..32464047) FT /rpt_family="ALU" FT repeat_region 32464076..32464336 FT /rpt_family="MER" FT repeat_region 32464533..32464828 FT /rpt_family="ALU" FT repeat_region 32465349..32465370 FT /rpt_family="L1" FT repeat_region 32466579..32466869 FT /rpt_family="ALU" FT repeat_region 32468134..32468422 FT /rpt_family="ALU" FT repeat_region 32468866..32468887 FT /rpt_family="L1" FT repeat_region 32470874..32470912 FT /rpt_family="L1" FT repeat_region complement(32471046..32471308) FT /rpt_family="L1" FT repeat_region complement(32471396..32471662) FT /rpt_family="ALU" FT repeat_region complement(32474193..32474484) FT /rpt_family="ALU" FT repeat_region 32475711..32475744 FT /rpt_family="L1" FT repeat_region 32479733..32479881 FT /rpt_family="ALU" FT repeat_region 32483480..32483518 FT /rpt_family="THR" FT repeat_region 32484929..32485212 FT /rpt_family="ALU" FT repeat_region 32488492..32488600 FT /rpt_family="L1" FT repeat_region 32490256..32490469 FT /rpt_family="L1" FT repeat_region 32493852..32493887 FT /rpt_family="L1" FT repeat_region complement(32495768..32496060) FT /rpt_family="ALU" FT repeat_region complement(32496192..32496481) FT /rpt_family="ALU" FT repeat_region 32500124..32500157 FT /rpt_family="L1" FT repeat_region complement(32500532..32500823) FT /rpt_family="ALU" FT repeat_region complement(32502441..32502733) FT /rpt_family="ALU" FT repeat_region 32504686..32504711 FT /rpt_family="THR" FT repeat_region complement(32506426..32506717) FT /rpt_family="ALU" FT repeat_region 32508120..32508398 FT /rpt_family="ALU" FT repeat_region 32511192..32511486 FT /rpt_family="ALU" FT repeat_region complement(32511887..32512111) FT /rpt_family="L1" FT repeat_region complement(32512174..32512871) FT /rpt_family="L1" FT repeat_region complement(32512890..32513173) FT /rpt_family="ALU" FT repeat_region complement(32513175..32513715) FT /rpt_family="L1" FT repeat_region 32516184..32516281 FT /rpt_family="ALU" FT repeat_region 32516542..32516834 FT /rpt_family="ALU" FT misc_feature 32525387..32525614 FT /note="match to EST AA069484 (NID:g1576852) zf74c01.r1" FT misc_feature complement(32525902..32526318) FT /note="match to EST AA069447 (NID:g1576806) zf74c01.s1" FT misc_feature 32526717..32527540 FT /note="probable elongation factor 1-beta pseudogene" FT misc_feature 32526745..32526815 FT /note="similar to EST W19746 (NID:g1295665) zb43g11.r1" FT misc_feature 32526921..32526988 FT /note="similar to EST AA341721 (NID:g1993958)" FT misc_feature 32526988..32527143 FT /note="similar to EST AA341721 (NID:g1993958)" FT misc_feature 32527044..32527159 FT /note="similar to EST AA305811 (NID:g1958139)" FT misc_feature 32527184..32527425 FT /note="similar to EST AA305811 (NID:g1958139)" FT misc_feature 32527184..32527420 FT /note="similar to EST W19746 (NID:g1295665) zb43g11.r1" FT misc_feature 32527198..32527550 FT /note="similar to EST D54062 (NID:g955959)" FT misc_feature complement(32527409..32527459) FT /note="similar to EST T67891 (NID:g679039) yc39g07.s1" FT repeat_region 32528351..32528639 FT /rpt_family="ALU" FT repeat_region 32528650..32528804 FT /rpt_family="ALU" FT repeat_region complement(32530287..32530447) FT /rpt_family="L1" FT repeat_region complement(32530453..32530744) FT /rpt_family="ALU" FT repeat_region complement(32530755..32530982) FT /rpt_family="L1" FT repeat_region 32532161..32532453 FT /rpt_family="ALU" FT misc_feature 32534985..32535367 FT /note="match to EST AA417224 (NID:g2077305) zu05a09.r1" FT misc_feature complement(32535017..32535376) FT /note="match to EST AA417201 (NID:g2077478) zu05a09.s1" FT misc_feature 32535433..32690583 FT /note="annotated region of clone" FT misc_feature 32535433 FT /note="Clone_left_end: RP11-207N4" FT mRNA join(32559822..32559871,32565036..32565134) FT /locus_tag="RP11-207N4.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:DR731308.1" FT mRNA join(32605437..32606002,32652971..32653170, FT 32676100..32676153,AL138692.26:988..1127, FT AL138692.26:7940..8030,AL138692.26:8256..8335, FT AL138692.26:8449..8529,AL138692.26:15326..15494, FT AL138692.26:18558..18650,AL138692.26:18739..18837, FT AL138692.26:20525..20626,AL138692.26:30936..31039, FT AL138692.26:31493..31601,AL138692.26:33402..33488, FT AL138692.26:39145..39316,AL138692.26:40927..41059, FT AL138692.26:44798..44905,AL138692.26:54666..54924, FT AL138692.26:57021..57203,AL138692.26:59200..59286, FT AL138692.26:61831..62090,AL138692.26:62498..62687, FT AL138692.26:63329..63453,AL138692.26:66631..66688, FT AL138692.26:68254..68345,AL138692.26:68630..68802, FT AL138692.26:69914..70074,AL138692.26:71200..71310, FT AL138692.26:77797..77951,AL138692.26:85595..85694, FT AL138692.26:86010..86181,AL138692.26:92507..92763, FT AL138692.26:93239..93385,AL138692.26:94520..94688, FT AL138692.26:95946..96036,AL138692.26:102403..102485, FT AL138692.26:107889..108039,AL138692.26:108587..108690, FT AL138692.26:109443..109628,AL138692.26:112110..112308, FT AL138692.26:114833..114954,AL445212.9:2762..2949, FT AL445212.9:4266..4360,AL445212.9:5567..6174, FT AL445212.9:7440..7537,AL445212.9:7899..8069, FT AL445212.9:12230..12370,AL445212.9:15511..15690, FT AL445212.9:17714..17875,AL445212.9:20066..20140, FT AL445212.9:22412..22582,AL445212.9:29804..30004, FT AL445212.9:30502..30663,AL445212.9:33638..33804, FT AL445212.9:35358..35547,AL445212.9:43030..43179, FT AL445212.9:44652..44750,AL445212.9:46653..46736, FT AL445212.9:57821..57931,AL445212.9:62556..62758, FT AL445212.9:63390..64845) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-001" FT /product="furry homolog (Drosophila)" FT /note="match: cDNAs: Em:AL049784 Em:U50534 Em:U57961" FT /note="match: ESTs: Em:AA351205 Em:AA612910.1 Em:AA864870.1 FT Em:AI235299 Em:AI523826.1 Em:AI606639 Em:AI796288.1 FT Em:AI844428.1 Em:AL047471 Em:AL530241 Em:AL530242 FT Em:AV722809 Em:AW253742 Em:AW269304.1 Em:AW492411 FT Em:AW504462 Em:AW812962 Em:AW920810 Em:BB528464 Em:BE652557 FT Em:BE767066 Em:BE867213 Em:BE947683 Em:BF289260 Em:BF471208 FT Em:BF472497 Em:BF563198 Em:BF602538 Em:BF902975 Em:BF958702 FT Em:BF961963 Em:BG385688 Em:BI345313 Em:BI837076 Em:BM671555 FT Em:BM712797 Em:BQ340400 Em:BQ340482 Em:BQ346273 Em:D80714" FT mRNA complement(join(32599451..32600233,32601340..32601390, FT 32601712..32601803,32605588..32605776)) FT /locus_tag="RP11-207N4.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI547999 Em:W78056 Em:W79150" FT mRNA join(32605692..32606002,32612567..32612757) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-002" FT /product="furry homolog (Drosophila)" FT /note="match: ESTs: Em:AI523826.1" FT CDS join(32605933..32606002,32652971..32653170, FT 32676100..32676153,AL138692.26:988..1127, FT AL138692.26:7940..8030,AL138692.26:8256..8335, FT AL138692.26:8449..8529,AL138692.26:15326..15494, FT AL138692.26:18558..18650,AL138692.26:18739..18837, FT AL138692.26:20525..20626,AL138692.26:30936..31039, FT AL138692.26:31493..31601,AL138692.26:33402..33488, FT AL138692.26:39145..39316,AL138692.26:40927..41059, FT AL138692.26:44798..44905,AL138692.26:54666..54924, FT AL138692.26:57021..57203,AL138692.26:59200..59286, FT AL138692.26:61831..62090,AL138692.26:62498..62687, FT AL138692.26:63329..63453,AL138692.26:66631..66688, FT AL138692.26:68254..68345,AL138692.26:68630..68802, FT AL138692.26:69914..70074,AL138692.26:71200..71310, FT AL138692.26:77797..77951,AL138692.26:85595..85694, FT AL138692.26:86010..86181,AL138692.26:92507..92763, FT AL138692.26:93239..93385,AL138692.26:94520..94688, FT AL138692.26:95946..96036,AL138692.26:102403..102485, FT AL138692.26:107889..108039,AL138692.26:108587..108690, FT AL138692.26:109443..109628,AL138692.26:112110..112308, FT AL138692.26:114833..114954,AL445212.9:2762..2949, FT AL445212.9:4266..4360,AL445212.9:5567..6174, FT AL445212.9:7440..7537,AL445212.9:7899..8069, FT AL445212.9:12230..12370,AL445212.9:15511..15690, FT AL445212.9:17714..17875,AL445212.9:20066..20140, FT AL445212.9:22412..22582,AL445212.9:29804..30004, FT AL445212.9:30502..30663,AL445212.9:33638..33804, FT AL445212.9:35358..35547,AL445212.9:43030..43179, FT AL445212.9:44652..44750,AL445212.9:46653..46736, FT AL445212.9:57821..57931,AL445212.9:62556..62758, FT AL445212.9:63390..63648) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-001" FT /standard_name="OTTHUMP00000018221" FT /product="furry homolog (Drosophila)" FT /note="match: proteins: Tr:Q96KW3 Tr:Q9Y3N6" FT /protein_id="CAI12629.1" FT /translation="MASQQDSGFFEISIKYLLKSWSNTSPVGNGYIKPPVPPASGTHRE FT KGPPTMLPINVDPDSKPGEYVLKSLFVNFTTQAERKIRIIMAEPLEKPLTKSLQRGEDP FT QFDQVISSMSSLSEYCLPSILRTLFDWYKRQNGIEDESHEYRPRTSNKSKSDEQQRDYL FT MERRDLAIDFIFSLVLIEVLKQIPLHPVIDSLIHDVINLAFKHFKYKEGYLGPNTGNMH FT IVADLYAEVIGVLAQAKFPAVKKKFMAELKELRHKEQNPYVVQSIISLIMGMKFFRIKM FT YPVEDFEASLQFMQECAHYFLEVKDKDIKHALAGLFVEILVPVAAAVKNEVNVPCLRNF FT VESLYDTTLELSSRKKHSLALYPLVTCLLCVSQKQLFLNRWHIFLNNCLSNLKNKDPKM FT ARVALESLYRLLWVYMIRIKCESNTATQSRLITIITTLFPKGSRGVVPRDMPLNIFVKI FT IQFIAQERLDFAMKEIIFDFLCVGKPAKAFSLNPERMNIGLRAFLVIADSLQQKDGEPP FT MPVTGAVLPSGNTLRVKKTYLSKTLTEEEAKMIGMSLYYSQVRKAVDNILRHLDKEVGR FT CMMLTNVQMLNKEPEDMITGERKPKIDLFRTCVAAIPRLLPDGMSKLELIDLLARLSIH FT MDDELRHIAQNSLQGLLVDFSDWREDVLFGFTNFLLREVNDMHHTLLDSSLKLLLQLLT FT QWKLVIQTQGKVYEQANKIRNSELIANGSSHRIQSERGPHCSVLHAVEGFALVLLCSFQ FT VATRKLSVLILKEIRALFIALGQPEDDDRPMIDVMDQLSSSILESFIHVAVSDSATLPL FT THNVDLQWLVEWNAVLVNSHYDVKSPSHVWIFAQSVKDPWVLCLFSFLRQENLPKHCPT FT ALSYAWPYAFTRLQSVMPLVDPNSPINAKKTSTAGSGDNYVTLWRNYLILCFGVAKPSI FT MSPGHLRASTPEIMATTPDGTVSYDNKAIGTPSVGVLLKQLVPLMRLESIEITESLVLG FT FGRTNSLVFRELVEELHPLMKEALERRPENKKRRERRDLLRLQLLRIFELLADAGVISD FT STNGALERDTLALGALFLEYVDLTRMLLEAENDKEVEILKDIRAHFSAMVANLIQCVPV FT HHRRFLFPQQSLRHHLFILFSQWAGPFSIMFTPLDRYSDRNHQITRYQYCALKAMSAVL FT CCGPVFDNVGLSPDGYLYKWLDNILACQDLRVHQLGCEVVVLLLELNPDQINLFNWAID FT RCYTGSYQLASGCFKAIATVCGSRNYPFDIVTLLNLVLFKASDTNREIYEISMQLMQIL FT EAKLFVYSKKVAEQRPGSILYGTHGPLPPLYSVSLALLSCELARMYPELTLPLFSEVSQ FT RFPTTHPNGRQIMLTYLLPWLHNIELVDSRLLLPGSSPSSPEDEVKDREGDVTASHGLR FT GNGWGSPEATSLVLNNLMYMTAKYGDEVPGPEMENAWNALANNEKWSNNLRITLQFLIS FT LCGVSSDTVLLPYIKKVAIYLCRNNTIQTMEELLFELQQTEPVNPIVQHCDNPPFYRFT FT ASSKASAAASGTTSSSNTVVAGQENFPDAEENKILKESDERFSNVIRAHTRLESRYSNS FT SGGSYDEDKNDPISPYTGWLLTITETKQPQPLPMPCTGGCWAPLVDYLPETITPRGPLH FT RCNIAVIFMTEMVVDHSVREDWALHLPLLLHAVFLGLDHYRPEVFEHSKKLLLHLLIAL FT SCNSNFHSIASVLLQTREMGEAKTLTVQPAYQPEYLYTGGFDFLREDQSSPVPDSGLSS FT SSTSSSISLGGSSGNLPQMTQEVEDVDTAAETDEKANKLIEFLTTRAFGPLWCHEDITP FT KNQNSKSAEQLTNFLRHVVSVFKDSKSGFHLEHQLSEVALQTALASSSRHYAGRSFQIF FT RALKQPLSAHALSDLLSRLVEVIGEHGDEIQGYVMEALLTLEAAVDNLSDCLKNSDLLT FT VLSRSSSPDLSSSSKLTASRKSTGQLNMNPGTTSGNTATAERSRHQRSFSVPKKFGVID FT RSSDPPRSATLDRIQACTQQGLSSKTRSSSSLKDSLTDPSHINHPTNLLATIFWVTVAL FT MESDFEFEYLMALRLLSRLLAHMPLDKAENREKLEKLQAQLKWADFSGLQQLLLKGFTS FT LTTTDLTLQLFSLLTPVSKISMVDASHAIGFPLNVLCLLPQLIQHFENPNQFCKDIAER FT IAQVCLEEKNPKLSNLAHVMTLYKTHSYTRDCATWVNVVCRYLHEAYADITLNMVTYLA FT ELLEKGLPSVQQPLLQVIYSLLSYMDLSVVPVKQFNVEVLKTIEKYVQSVHWREALNIL FT KLVVSRSASLVLPSYQHSDLSKIEIHRVWTSASKELPGKTLDFHFDISETPIIGRRYDE FT LQNSSGRDGKPRAMAVTRSTSSTSSGSNSNVLVPVSWKRPQYSQKRTKEKLVHVLSLCG FT QEVGLSKNPSVIFSSCGDLDLLEHQTSLVSSEDGAREQENMDDTNSEQQFRVFRDFDFL FT DVELEDGEGESMDNFNWGVRRRSLDSLDKCDMQILEERQLSGSTPSLNKMHHEDSDESS FT EEEDLTASQILEHSDLIMTLSPSEETNPMELLTTACDSTPAEPHSFNTRMSSFDASLPD FT MNNLQISEGSKAEAVREEEDTTVHEDDLSSSINELPAAFECSDSFSLDMTEGEEKGNRA FT LDQFTLASFGEGDRGVSPPPSPFFSAILAAFQPAACDDAEEAWRSHINQLMCDSDGSCA FT VYTFHVFSSLFKNIQKRFCFLTCDAASYLGDNLRGIGSKFVSSSQMLTSCSECPTLFVD FT AETLLSCGLLDKLKFSVLELQEYLDTYNNRKEATLSWLANCKATFAGGSRDGVITCQPG FT DSEEKQLELCQRLYKLHFQLLLLFQSYCKLIGQVHEVSSMPELLNMSRELSDLKKHLKE FT ASAVIAADPLYSDGAWSEPTFTSTEAAIQSMLECLKNNELGKALRQIRECRSLWPNDIF FT GSSSDDEVQTLLNIYFRHQTLGQTGTYALVGSNQSLTEICTKLMELNMEIRDMIRRAQS FT YRVLTTFLPDSSVSGTSL" FT mRNA join(32635001..32635300,32652971..32653170, FT 32676100..32676153,AL138692.26:988..>1124) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-003" FT /product="furry homolog (Drosophila)" FT /note="match: ESTs: Em:BB663518" FT CDS join(32635240..32635300,32652971..32653170, FT 32676100..32676153,AL138692.26:988..>1124) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-003" FT /standard_name="OTTHUMP00000018222" FT /product="furry homolog (Drosophila)" FT /protein_id="CAI12630.1" FT /translation="MEITTACWRRSCVISFIKGLASPVGNGYIKPPVPPASGTHREKGP FT PTMLPINVDPDSKPGEYVLKSLFVNFTTQAERKIRIIMAEPLEKPLTKSLQRGEDPQFD FT QVISSMSSLSEYCLPSILRTLFDWYKRQNGIEDESHEYRPRTSNKS" FT misc_feature 32690583 FT /note="Clone_right_end: RP11-207N4" FT misc_feature 32690584..32806049 FT /note="annotated region of clone" FT misc_feature 32745978..32746475 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR.Restriction FT digest data confirms the assembly" FT mRNA join(AL137143.8:70005..70570,AL137143.8:117539..117738, FT AL137143.8:140668..140721,32691471..32691610, FT 32698423..32698513,32698739..32698818,32698932..32699012, FT 32705809..32705977,32709041..32709133,32709222..32709320, FT 32711008..32711109,32721419..32721522,32721976..32722084, FT 32723885..32723971,32729628..32729799,32731410..32731542, FT 32735281..32735388,32745149..32745407,32747504..32747686, FT 32749683..32749769,32752314..32752573,32752981..32753170, FT 32753812..32753936,32757114..32757171,32758737..32758828, FT 32759113..32759285,32760397..32760557,32761683..32761793, FT 32768280..32768434,32776078..32776177,32776493..32776664, FT 32782990..32783246,32783722..32783868,32785003..32785171, FT 32786429..32786519,32792886..32792968,32798372..32798522, FT 32799070..32799173,32799926..32800111,32802593..32802791, FT 32805316..32805437,AL445212.9:2762..2949, FT AL445212.9:4266..4360,AL445212.9:5567..6174, FT AL445212.9:7440..7537,AL445212.9:7899..8069, FT AL445212.9:12230..12370,AL445212.9:15511..15690, FT AL445212.9:17714..17875,AL445212.9:20066..20140, FT AL445212.9:22412..22582,AL445212.9:29804..30004, FT AL445212.9:30502..30663,AL445212.9:33638..33804, FT AL445212.9:35358..35547,AL445212.9:43030..43179, FT AL445212.9:44652..44750,AL445212.9:46653..46736, FT AL445212.9:57821..57931,AL445212.9:62556..62758, FT AL445212.9:63390..64845) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-001" FT /product="furry homolog (Drosophila)" FT /note="match: cDNAs: Em:AL049784 Em:U50534 Em:U57961" FT /note="match: ESTs: Em:AA351205 Em:AA612910.1 Em:AA864870.1 FT Em:AI235299 Em:AI523826.1 Em:AI606639 Em:AI796288.1 FT Em:AI844428.1 Em:AL047471 Em:AL530241 Em:AL530242 FT Em:AV722809 Em:AW253742 Em:AW269304.1 Em:AW492411 FT Em:AW504462 Em:AW812962 Em:AW920810 Em:BB528464 Em:BE652557 FT Em:BE767066 Em:BE867213 Em:BE947683 Em:BF289260 Em:BF471208 FT Em:BF472497 Em:BF563198 Em:BF602538 Em:BF902975 Em:BF958702 FT Em:BF961963 Em:BG385688 Em:BI345313 Em:BI837076 Em:BM671555 FT Em:BM712797 Em:BQ340400 Em:BQ340482 Em:BQ346273 Em:D80714" FT CDS join(AL137143.8:70501..70570,AL137143.8:117539..117738, FT AL137143.8:140668..140721,32691471..32691610, FT 32698423..32698513,32698739..32698818,32698932..32699012, FT 32705809..32705977,32709041..32709133,32709222..32709320, FT 32711008..32711109,32721419..32721522,32721976..32722084, FT 32723885..32723971,32729628..32729799,32731410..32731542, FT 32735281..32735388,32745149..32745407,32747504..32747686, FT 32749683..32749769,32752314..32752573,32752981..32753170, FT 32753812..32753936,32757114..32757171,32758737..32758828, FT 32759113..32759285,32760397..32760557,32761683..32761793, FT 32768280..32768434,32776078..32776177,32776493..32776664, FT 32782990..32783246,32783722..32783868,32785003..32785171, FT 32786429..32786519,32792886..32792968,32798372..32798522, FT 32799070..32799173,32799926..32800111,32802593..32802791, FT 32805316..32805437,AL445212.9:2762..2949, FT AL445212.9:4266..4360,AL445212.9:5567..6174, FT AL445212.9:7440..7537,AL445212.9:7899..8069, FT AL445212.9:12230..12370,AL445212.9:15511..15690, FT AL445212.9:17714..17875,AL445212.9:20066..20140, FT AL445212.9:22412..22582,AL445212.9:29804..30004, FT AL445212.9:30502..30663,AL445212.9:33638..33804, FT AL445212.9:35358..35547,AL445212.9:43030..43179, FT AL445212.9:44652..44750,AL445212.9:46653..46736, FT AL445212.9:57821..57931,AL445212.9:62556..62758, FT AL445212.9:63390..63648) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-001" FT /standard_name="OTTHUMP00000018221" FT /product="furry homolog (Drosophila)" FT /note="match: proteins: Tr:Q96KW3 Tr:Q9Y3N6" FT /protein_id="CAI13379.1" FT /translation="MASQQDSGFFEISIKYLLKSWSNTSPVGNGYIKPPVPPASGTHRE FT KGPPTMLPINVDPDSKPGEYVLKSLFVNFTTQAERKIRIIMAEPLEKPLTKSLQRGEDP FT QFDQVISSMSSLSEYCLPSILRTLFDWYKRQNGIEDESHEYRPRTSNKSKSDEQQRDYL FT MERRDLAIDFIFSLVLIEVLKQIPLHPVIDSLIHDVINLAFKHFKYKEGYLGPNTGNMH FT IVADLYAEVIGVLAQAKFPAVKKKFMAELKELRHKEQNPYVVQSIISLIMGMKFFRIKM FT YPVEDFEASLQFMQECAHYFLEVKDKDIKHALAGLFVEILVPVAAAVKNEVNVPCLRNF FT VESLYDTTLELSSRKKHSLALYPLVTCLLCVSQKQLFLNRWHIFLNNCLSNLKNKDPKM FT ARVALESLYRLLWVYMIRIKCESNTATQSRLITIITTLFPKGSRGVVPRDMPLNIFVKI FT IQFIAQERLDFAMKEIIFDFLCVGKPAKAFSLNPERMNIGLRAFLVIADSLQQKDGEPP FT MPVTGAVLPSGNTLRVKKTYLSKTLTEEEAKMIGMSLYYSQVRKAVDNILRHLDKEVGR FT CMMLTNVQMLNKEPEDMITGERKPKIDLFRTCVAAIPRLLPDGMSKLELIDLLARLSIH FT MDDELRHIAQNSLQGLLVDFSDWREDVLFGFTNFLLREVNDMHHTLLDSSLKLLLQLLT FT QWKLVIQTQGKVYEQANKIRNSELIANGSSHRIQSERGPHCSVLHAVEGFALVLLCSFQ FT VATRKLSVLILKEIRALFIALGQPEDDDRPMIDVMDQLSSSILESFIHVAVSDSATLPL FT THNVDLQWLVEWNAVLVNSHYDVKSPSHVWIFAQSVKDPWVLCLFSFLRQENLPKHCPT FT ALSYAWPYAFTRLQSVMPLVDPNSPINAKKTSTAGSGDNYVTLWRNYLILCFGVAKPSI FT MSPGHLRASTPEIMATTPDGTVSYDNKAIGTPSVGVLLKQLVPLMRLESIEITESLVLG FT FGRTNSLVFRELVEELHPLMKEALERRPENKKRRERRDLLRLQLLRIFELLADAGVISD FT STNGALERDTLALGALFLEYVDLTRMLLEAENDKEVEILKDIRAHFSAMVANLIQCVPV FT HHRRFLFPQQSLRHHLFILFSQWAGPFSIMFTPLDRYSDRNHQITRYQYCALKAMSAVL FT CCGPVFDNVGLSPDGYLYKWLDNILACQDLRVHQLGCEVVVLLLELNPDQINLFNWAID FT RCYTGSYQLASGCFKAIATVCGSRNYPFDIVTLLNLVLFKASDTNREIYEISMQLMQIL FT EAKLFVYSKKVAEQRPGSILYGTHGPLPPLYSVSLALLSCELARMYPELTLPLFSEVSQ FT RFPTTHPNGRQIMLTYLLPWLHNIELVDSRLLLPGSSPSSPEDEVKDREGDVTASHGLR FT GNGWGSPEATSLVLNNLMYMTAKYGDEVPGPEMENAWNALANNEKWSNNLRITLQFLIS FT LCGVSSDTVLLPYIKKVAIYLCRNNTIQTMEELLFELQQTEPVNPIVQHCDNPPFYRFT FT ASSKASAAASGTTSSSNTVVAGQENFPDAEENKILKESDERFSNVIRAHTRLESRYSNS FT SGGSYDEDKNDPISPYTGWLLTITETKQPQPLPMPCTGGCWAPLVDYLPETITPRGPLH FT RCNIAVIFMTEMVVDHSVREDWALHLPLLLHAVFLGLDHYRPEVFEHSKKLLLHLLIAL FT SCNSNFHSIASVLLQTREMGEAKTLTVQPAYQPEYLYTGGFDFLREDQSSPVPDSGLSS FT SSTSSSISLGGSSGNLPQMTQEVEDVDTAAETDEKANKLIEFLTTRAFGPLWCHEDITP FT KNQNSKSAEQLTNFLRHVVSVFKDSKSGFHLEHQLSEVALQTALASSSRHYAGRSFQIF FT RALKQPLSAHALSDLLSRLVEVIGEHGDEIQGYVMEALLTLEAAVDNLSDCLKNSDLLT FT VLSRSSSPDLSSSSKLTASRKSTGQLNMNPGTTSGNTATAERSRHQRSFSVPKKFGVID FT RSSDPPRSATLDRIQACTQQGLSSKTRSSSSLKDSLTDPSHINHPTNLLATIFWVTVAL FT MESDFEFEYLMALRLLSRLLAHMPLDKAENREKLEKLQAQLKWADFSGLQQLLLKGFTS FT LTTTDLTLQLFSLLTPVSKISMVDASHAIGFPLNVLCLLPQLIQHFENPNQFCKDIAER FT IAQVCLEEKNPKLSNLAHVMTLYKTHSYTRDCATWVNVVCRYLHEAYADITLNMVTYLA FT ELLEKGLPSVQQPLLQVIYSLLSYMDLSVVPVKQFNVEVLKTIEKYVQSVHWREALNIL FT KLVVSRSASLVLPSYQHSDLSKIEIHRVWTSASKELPGKTLDFHFDISETPIIGRRYDE FT LQNSSGRDGKPRAMAVTRSTSSTSSGSNSNVLVPVSWKRPQYSQKRTKEKLVHVLSLCG FT QEVGLSKNPSVIFSSCGDLDLLEHQTSLVSSEDGAREQENMDDTNSEQQFRVFRDFDFL FT DVELEDGEGESMDNFNWGVRRRSLDSLDKCDMQILEERQLSGSTPSLNKMHHEDSDESS FT EEEDLTASQILEHSDLIMTLSPSEETNPMELLTTACDSTPAEPHSFNTRMSSFDASLPD FT MNNLQISEGSKAEAVREEEDTTVHEDDLSSSINELPAAFECSDSFSLDMTEGEEKGNRA FT LDQFTLASFGEGDRGVSPPPSPFFSAILAAFQPAACDDAEEAWRSHINQLMCDSDGSCA FT VYTFHVFSSLFKNIQKRFCFLTCDAASYLGDNLRGIGSKFVSSSQMLTSCSECPTLFVD FT AETLLSCGLLDKLKFSVLELQEYLDTYNNRKEATLSWLANCKATFAGGSRDGVITCQPG FT DSEEKQLELCQRLYKLHFQLLLLFQSYCKLIGQVHEVSSMPELLNMSRELSDLKKHLKE FT ASAVIAADPLYSDGAWSEPTFTSTEAAIQSMLECLKNNELGKALRQIRECRSLWPNDIF FT GSSSDDEVQTLLNIYFRHQTLGQTGTYALVGSNQSLTEICTKLMELNMEIRDMIRRAQS FT YRVLTTFLPDSSVSGTSL" FT mRNA join(AL137143.8:99569..99868,AL137143.8:117539..117738, FT AL137143.8:140668..140721,32691471..>32691607) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-003" FT /product="furry homolog (Drosophila)" FT /note="match: ESTs: Em:BB663518" FT CDS join(AL137143.8:99808..99868,AL137143.8:117539..117738, FT AL137143.8:140668..140721,32691471..>32691607) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-003" FT /standard_name="OTTHUMP00000018222" FT /product="furry homolog (Drosophila)" FT /protein_id="CAI13380.1" FT /translation="MEITTACWRRSCVISFIKGLASPVGNGYIKPPVPPASGTHREKGP FT PTMLPINVDPDSKPGEYVLKSLFVNFTTQAERKIRIIMAEPLEKPLTKSLQRGEDPQFD FT QVISSMSSLSEYCLPSILRTLFDWYKRQNGIEDESHEYRPRTSNKS" FT misc_feature 32805850 FT /note="Clone_left_end: RP11-37E23" FT misc_feature 32806050..32972606 FT /note="annotated region of clone" FT misc_feature 32819324..32819328 FT /note="Sequence from overlapping clone bA321C24 FT (AL138692).Assembly confirmed by restriction digest" FT misc_feature 32823603 FT /note="Clone_right_end: RP11-321B6" FT mRNA join(32823676..32823824,32826015..32826089, FT 32828361..32828531,32832101..32832109,32835753..32835953, FT 32836451..32836612,32839587..32839753,32841307..32841496, FT 32848979..32849096,32850619..32850699,32852602..32852976) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-005" FT /product="furry homolog (Drosophila)" FT /note="match: ESTs: Em:AA007163 Em:AI338798 Em:BI493201" FT CDS join(32823732..32823824,32826015..32826089, FT 32828361..32828531,32832101..32832109,32835753..32835953, FT 32836451..32836612,32839587..32839753,32841307..32841496, FT 32848979..32849096,32850619..32850699,32852602..32852618) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-005" FT /standard_name="OTTHUMP00000018224" FT /product="furry homolog (Drosophila)" FT /protein_id="CAI40475.1" FT /translation="MAVTRSTSSTSSGSNSNVLVPVSWKRPQYSQKRTKEKLVHVLSLC FT GQEVGLSKNPSVIFSSCGDLDLLEHQTSLVSSEDGAREQENMDDTNSEQQFRVFRDFDF FT LDVELEDGEELQGESMDNFNWGVRRRSLDSLDKCDMQILEERQLSGSTPSLNKMHHEDS FT DESSEEEDLTASQILEHSDLIMTLSPSEETNPMELLTTACDSTPAEPHSFNTRMSSFDA FT SLPDMNNLQISEGSKAEAVREEEDTTVHEDDLSSSINELPAAFECSDSFSLDMTEGEEK FT GNRALDQFTLASFGEGDRGVSPPPSPFFSAILAAFQPAACDDAEEAWRSHINQLMCDSD FT GSCAVYTFHVFSSLFKNIQKRFCFLTCDAASYLGDNLRGIGSKFVSSSQMLTSCSAGQA FT QVQCVRTARIFGYLQQQERGHTLLACKL" FT misc_feature 32834688 FT /note="Clone_left_end: RP1-214K23" FT mRNA join(<32836526..32836612,32839587..32839753, FT 32841380..32841496,32848979..32849128,32850601..32850699, FT 32852602..32852685,32863770..32863776) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-006" FT /product="furry homolog (Drosophila)" FT /note="match: ESTs: Em:AL047470 Em:BI837076" FT polyA_signal 32852954..32852959 FT polyA_site 32852976 FT mRNA join(32861988..32862021,32863770..32863880, FT 32868505..32868707,32869339..32869640) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-004" FT /product="furry homolog (Drosophila)" FT /note="match: ESTs: Em:BM671555" FT CDS join(32862007..32862021,32863770..32863880, FT 32868505..32868707,32869339..32869597) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-004" FT /standard_name="OTTHUMP00000018223" FT /product="furry homolog (Drosophila)" FT /protein_id="CAI40477.1" FT /translation="MESLAQLELCQRLYKLHFQLLLLFQSYCKLIGQVHEVSSMPELLN FT MSRELSDLKKHLKEASAVIAADPLYSDGAWSEPTFTSTEAAIQSMLECLKNNELGKALR FT QIRECRSLWPNDIFGSSSDDEVQTLLNIYFRHQTLGQTGTYALVGSNQSLTEICTKLME FT LNMEIRDMIRRAQSYRVLTTFLPDSSVSGTSL" FT polyA_signal 32870761..32870766 FT polyA_site 32870794 FT mRNA join(32872291..32872469,32872592..32872849) FT /locus_tag="RP11-37E23.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA425480" FT mRNA join(AL137143.8:70005..70570,AL137143.8:117539..117738, FT AL137143.8:140668..140721,AL138692.26:988..1127, FT AL138692.26:7940..8030,AL138692.26:8256..8335, FT AL138692.26:8449..8529,AL138692.26:15326..15494, FT AL138692.26:18558..18650,AL138692.26:18739..18837, FT AL138692.26:20525..20626,AL138692.26:30936..31039, FT AL138692.26:31493..31601,AL138692.26:33402..33488, FT AL138692.26:39145..39316,AL138692.26:40927..41059, FT AL138692.26:44798..44905,AL138692.26:54666..54924, FT AL138692.26:57021..57203,AL138692.26:59200..59286, FT AL138692.26:61831..62090,AL138692.26:62498..62687, FT AL138692.26:63329..63453,AL138692.26:66631..66688, FT AL138692.26:68254..68345,AL138692.26:68630..68802, FT AL138692.26:69914..70074,AL138692.26:71200..71310, FT AL138692.26:77797..77951,AL138692.26:85595..85694, FT AL138692.26:86010..86181,AL138692.26:92507..92763, FT AL138692.26:93239..93385,AL138692.26:94520..94688, FT AL138692.26:95946..96036,AL138692.26:102403..102485, FT AL138692.26:107889..108039,AL138692.26:108587..108690, FT AL138692.26:109443..109628,AL138692.26:112110..112308, FT AL138692.26:114833..114954,32808711..32808898, FT 32810215..32810309,32811516..32812123,32813389..32813486, FT 32813848..32814018,32818179..32818319,32821460..32821639, FT 32823663..32823824,32826015..32826089,32828361..32828531, FT 32835753..32835953,32836451..32836612,32839587..32839753, FT 32841307..32841496,32848979..32849128,32850601..32850699, FT 32852602..32852685,32863770..32863880,32868505..32868707, FT 32869339..32870794) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-001" FT /product="furry homolog (Drosophila)" FT /note="match: ESTs: Em:AA351205 Em:AA612910.1 Em:AA864870.1 FT Em:AI235299 Em:AI523826.1 Em:AI606639 Em:AI796288.1 FT Em:AI844428.1 Em:AL047471 Em:AL530241 Em:AL530242 FT Em:AV722809 Em:AW253742 Em:AW269304.1 Em:AW492411 FT Em:AW504462 Em:AW812962 Em:AW920810 Em:BB528464 Em:BE652557 FT Em:BE767066 Em:BE867213 Em:BE947683 Em:BF289260 Em:BF471208 FT Em:BF472497 Em:BF563198 Em:BF602538 Em:BF902975 Em:BF958702 FT Em:BF961963 Em:BG385688 Em:BI345313 Em:BI837076 Em:BM671555 FT Em:BM712797 Em:BQ340400 Em:BQ340482 Em:BQ346273 Em:D80714" FT /note="match: cDNAs: Em:AL049784 Em:U50534 Em:U57961" FT CDS join(AL137143.8:70501..70570,AL137143.8:117539..117738, FT AL137143.8:140668..140721,AL138692.26:988..1127, FT AL138692.26:7940..8030,AL138692.26:8256..8335, FT AL138692.26:8449..8529,AL138692.26:15326..15494, FT AL138692.26:18558..18650,AL138692.26:18739..18837, FT AL138692.26:20525..20626,AL138692.26:30936..31039, FT AL138692.26:31493..31601,AL138692.26:33402..33488, FT AL138692.26:39145..39316,AL138692.26:40927..41059, FT AL138692.26:44798..44905,AL138692.26:54666..54924, FT AL138692.26:57021..57203,AL138692.26:59200..59286, FT AL138692.26:61831..62090,AL138692.26:62498..62687, FT AL138692.26:63329..63453,AL138692.26:66631..66688, FT AL138692.26:68254..68345,AL138692.26:68630..68802, FT AL138692.26:69914..70074,AL138692.26:71200..71310, FT AL138692.26:77797..77951,AL138692.26:85595..85694, FT AL138692.26:86010..86181,AL138692.26:92507..92763, FT AL138692.26:93239..93385,AL138692.26:94520..94688, FT AL138692.26:95946..96036,AL138692.26:102403..102485, FT AL138692.26:107889..108039,AL138692.26:108587..108690, FT AL138692.26:109443..109628,AL138692.26:112110..112308, FT AL138692.26:114833..114954,32808711..32808898, FT 32810215..32810309,32811516..32812123,32813389..32813486, FT 32813848..32814018,32818179..32818319,32821460..32821639, FT 32823663..32823824,32826015..32826089,32828361..32828531, FT 32835753..32835953,32836451..32836612,32839587..32839753, FT 32841307..32841496,32848979..32849128,32850601..32850699, FT 32852602..32852685,32863770..32863880,32868505..32868707, FT 32869339..32869597) FT /gene="FRY" FT /locus_tag="RP11-37E23.6-001" FT /standard_name="OTTHUMP00000018221" FT /product="furry homolog (Drosophila)" FT /note="match: proteins: Tr:Q96KW3 Tr:Q9Y3N6" FT /protein_id="CAI40478.1" FT /translation="MASQQDSGFFEISIKYLLKSWSNTSPVGNGYIKPPVPPASGTHRE FT KGPPTMLPINVDPDSKPGEYVLKSLFVNFTTQAERKIRIIMAEPLEKPLTKSLQRGEDP FT QFDQVISSMSSLSEYCLPSILRTLFDWYKRQNGIEDESHEYRPRTSNKSKSDEQQRDYL FT MERRDLAIDFIFSLVLIEVLKQIPLHPVIDSLIHDVINLAFKHFKYKEGYLGPNTGNMH FT IVADLYAEVIGVLAQAKFPAVKKKFMAELKELRHKEQNPYVVQSIISLIMGMKFFRIKM FT YPVEDFEASLQFMQECAHYFLEVKDKDIKHALAGLFVEILVPVAAAVKNEVNVPCLRNF FT VESLYDTTLELSSRKKHSLALYPLVTCLLCVSQKQLFLNRWHIFLNNCLSNLKNKDPKM FT ARVALESLYRLLWVYMIRIKCESNTATQSRLITIITTLFPKGSRGVVPRDMPLNIFVKI FT IQFIAQERLDFAMKEIIFDFLCVGKPAKAFSLNPERMNIGLRAFLVIADSLQQKDGEPP FT MPVTGAVLPSGNTLRVKKTYLSKTLTEEEAKMIGMSLYYSQVRKAVDNILRHLDKEVGR FT CMMLTNVQMLNKEPEDMITGERKPKIDLFRTCVAAIPRLLPDGMSKLELIDLLARLSIH FT MDDELRHIAQNSLQGLLVDFSDWREDVLFGFTNFLLREVNDMHHTLLDSSLKLLLQLLT FT QWKLVIQTQGKVYEQANKIRNSELIANGSSHRIQSERGPHCSVLHAVEGFALVLLCSFQ FT VATRKLSVLILKEIRALFIALGQPEDDDRPMIDVMDQLSSSILESFIHVAVSDSATLPL FT THNVDLQWLVEWNAVLVNSHYDVKSPSHVWIFAQSVKDPWVLCLFSFLRQENLPKHCPT FT ALSYAWPYAFTRLQSVMPLVDPNSPINAKKTSTAGSGDNYVTLWRNYLILCFGVAKPSI FT MSPGHLRASTPEIMATTPDGTVSYDNKAIGTPSVGVLLKQLVPLMRLESIEITESLVLG FT FGRTNSLVFRELVEELHPLMKEALERRPENKKRRERRDLLRLQLLRIFELLADAGVISD FT STNGALERDTLALGALFLEYVDLTRMLLEAENDKEVEILKDIRAHFSAMVANLIQCVPV FT HHRRFLFPQQSLRHHLFILFSQWAGPFSIMFTPLDRYSDRNHQITRYQYCALKAMSAVL FT CCGPVFDNVGLSPDGYLYKWLDNILACQDLRVHQLGCEVVVLLLELNPDQINLFNWAID FT RCYTGSYQLASGCFKAIATVCGSRNYPFDIVTLLNLVLFKASDTNREIYEISMQLMQIL FT EAKLFVYSKKVAEQRPGSILYGTHGPLPPLYSVSLALLSCELARMYPELTLPLFSEVSQ FT RFPTTHPNGRQIMLTYLLPWLHNIELVDSRLLLPGSSPSSPEDEVKDREGDVTASHGLR FT GNGWGSPEATSLVLNNLMYMTAKYGDEVPGPEMENAWNALANNEKWSNNLRITLQFLIS FT LCGVSSDTVLLPYIKKVAIYLCRNNTIQTMEELLFELQQTEPVNPIVQHCDNPPFYRFT FT ASSKASAAASGTTSSSNTVVAGQENFPDAEENKILKESDERFSNVIRAHTRLESRYSNS FT SGGSYDEDKNDPISPYTGWLLTITETKQPQPLPMPCTGGCWAPLVDYLPETITPRGPLH FT RCNIAVIFMTEMVVDHSVREDWALHLPLLLHAVFLGLDHYRPEVFEHSKKLLLHLLIAL FT SCNSNFHSIASVLLQTREMGEAKTLTVQPAYQPEYLYTGGFDFLREDQSSPVPDSGLSS FT SSTSSSISLGGSSGNLPQMTQEVEDVDTAAETDEKANKLIEFLTTRAFGPLWCHEDITP FT KNQNSKSAEQLTNFLRHVVSVFKDSKSGFHLEHQLSEVALQTALASSSRHYAGRSFQIF FT RALKQPLSAHALSDLLSRLVEVIGEHGDEIQGYVMEALLTLEAAVDNLSDCLKNSDLLT FT VLSRSSSPDLSSSSKLTASRKSTGQLNMNPGTTSGNTATAERSRHQRSFSVPKKFGVID FT RSSDPPRSATLDRIQACTQQGLSSKTRSSSSLKDSLTDPSHINHPTNLLATIFWVTVAL FT MESDFEFEYLMALRLLSRLLAHMPLDKAENREKLEKLQAQLKWADFSGLQQLLLKGFTS FT LTTTDLTLQLFSLLTPVSKISMVDASHAIGFPLNVLCLLPQLIQHFENPNQFCKDIAER FT IAQVCLEEKNPKLSNLAHVMTLYKTHSYTRDCATWVNVVCRYLHEAYADITLNMVTYLA FT ELLEKGLPSVQQPLLQVIYSLLSYMDLSVVPVKQFNVEVLKTIEKYVQSVHWREALNIL FT KLVVSRSASLVLPSYQHSDLSKIEIHRVWTSASKELPGKTLDFHFDISETPIIGRRYDE FT LQNSSGRDGKPRAMAVTRSTSSTSSGSNSNVLVPVSWKRPQYSQKRTKEKLVHVLSLCG FT QEVGLSKNPSVIFSSCGDLDLLEHQTSLVSSEDGAREQENMDDTNSEQQFRVFRDFDFL FT DVELEDGEGESMDNFNWGVRRRSLDSLDKCDMQILEERQLSGSTPSLNKMHHEDSDESS FT EEEDLTASQILEHSDLIMTLSPSEETNPMELLTTACDSTPAEPHSFNTRMSSFDASLPD FT MNNLQISEGSKAEAVREEEDTTVHEDDLSSSINELPAAFECSDSFSLDMTEGEEKGNRA FT LDQFTLASFGEGDRGVSPPPSPFFSAILAAFQPAACDDAEEAWRSHINQLMCDSDGSCA FT VYTFHVFSSLFKNIQKRFCFLTCDAASYLGDNLRGIGSKFVSSSQMLTSCSECPTLFVD FT AETLLSCGLLDKLKFSVLELQEYLDTYNNRKEATLSWLANCKATFAGGSRDGVITCQPG FT DSEEKQLELCQRLYKLHFQLLLLFQSYCKLIGQVHEVSSMPELLNMSRELSDLKKHLKE FT ASAVIAADPLYSDGAWSEPTFTSTEAAIQSMLECLKNNELGKALRQIRECRSLWPNDIF FT GSSSDDEVQTLLNIYFRHQTLGQTGTYALVGSNQSLTEICTKLMELNMEIRDMIRRAQS FT YRVLTTFLPDSSVSGTSL" FT mRNA complement(join(32877837..32878159,32882823..32882897, FT 32884776..32884868,32885409..32886091)) FT /gene="RP11-37E23.4" FT /locus_tag="RP11-37E23.4-001" FT /product="novel protein similar to bovine ZAR1-like FT protein" FT /note="match: cDNAs: Em:BC146956.1 Em:BC146965.1" FT /note="match: ESTs: Em:AW313820 Em:DR731263.1" FT CDS complement(join(32878016..32878159,32882823..32882897, FT 32884776..32884868,32885409..32886062)) FT /gene="RP11-37E23.4" FT /locus_tag="RP11-37E23.4-001" FT /standard_name="OTTHUMP00000204129" FT /product="novel protein similar to bovine ZAR1-like FT protein" FT /note="match: proteins: Sw:A6NP61.2 Sw:Q1XFL1.3" FT /protein_id="CAX14964.1" FT /translation="MERFVRVPYGLYQGYGSTVPLGQPGLSGHKQPDWRQNMGPPTFLA FT RPGLLVPANAPDYCIDPYKRAQLKAILSQMNPSLSPRLCKPNTKEVGVQVSPRVDKAVQ FT CSLGPRTLSSCSPWDGRDPQEPLPACGVTSPATGRRGLIRLRRDGDEAESKALPGPAEA FT SQPQPPSRRSGADRQEEPGQLEESGEKDAPCPQETKSKQVPGDAASEPLRRPNFQFLEP FT KYGYFHCKDCKTRWESAYVWCISGTNKVYFKQLCCKCQKSFNPYRVEAIQCQTCSKSHC FT SCPQKKRHIDLRRPHRQELCGRCKDKRFSCGNIYSFKYVM" FT mRNA join(32889611..32889804,32890559..32890664, FT 32893214..32893462,32899213..32899321,32900238..32900287, FT 32900379..32900419,32900636..32900750,32903580..32903629, FT 32905056..32905167,32906409..32907524,32910402..32915333, FT 32918695..32918790,32920964..32921033,32928998..32929425, FT 32930565..32930746,32931879..32932066,32936660..32936830, FT 32937316..32937670,32944539..32944694,32945093..32945237, FT 32950807..32950928,32953454..32953652,32953887..32954050, FT 32954144..32954282,32968826..32969070,32971035..32971181, FT 32972299..32972606,AL137247.14:101..841) FT /gene="BRCA2" FT /locus_tag="RP11-298P3.3-001" FT /product="breast cancer 2, early onset" FT /note="match: ESTs: Em:AA215820.1 Em:AL601892.1 FT Em:BG772619.1 Em:BG773127.1 Em:BM839248.1 Em:BP220720.1 FT Em:BP289480.1 Em:BQ226936.1 Em:BQ439258.1 Em:BX496533.1 FT Em:BY798783.2 Em:CF143354.1 Em:CN409236.1 Em:DB074188.1" FT /note="match: cDNAs: Em:U43746.1" FT misc_feature 32890361 FT /note="Clone_left_end: RP11-298P3" FT CDS join(32890598..32890664,32893214..32893462, FT 32899213..32899321,32900238..32900287,32900379..32900419, FT 32900636..32900750,32903580..32903629,32905056..32905167, FT 32906409..32907524,32910402..32915333,32918695..32918790, FT 32920964..32921033,32928998..32929425,32930565..32930746, FT 32931879..32932066,32936660..32936830,32937316..32937670, FT 32944539..32944694,32945093..32945237,32950807..32950928, FT 32953454..32953652,32953887..32954050,32954144..32954282, FT 32968826..32969070,32971035..32971181,32972299..32972606, FT AL137247.14:101..401) FT /gene="BRCA2" FT /locus_tag="RP11-298P3.3-001" FT /standard_name="OTTHUMP00000018803" FT /product="breast cancer 2, early onset" FT /note="match: proteins: Sw:P51587.2 Tr:Q5TBJ7.1" FT /protein_id="CAI40479.1" FT /translation="MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSE FT PAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFKLD FT LGRNVPNSRHKSLRTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGS FT LFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFP FT HDTTANVKSYFSNHDESLKKNDRFIASVTDSENTNQREAASHGFGKTSGNSFKVNSCKD FT HIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKIFHEANADE FT CEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLT FT LSGLNGAQMEKIPLLHISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKP FT LNEETVVNKRDEEQHLESHTDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFN FT ASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQNSVALKN FT AGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSAQFEANAFEAPLTFANAD FT SGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSRNETCSNNTVISQDLDYKEAKCN FT KEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDF FT QSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKN FT IPMEKNQDVCALNENYKNVELLPPEKYMRVASPSRKVQFNQNTNLRVIQKNQEETTSIS FT KITVNPDSEELFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTMVLY FT GDTGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDISLNIDKIPEKNNDY FT MNKWAGLLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQYPTSLACVEIV FT NTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQ FT KAEITELSTILEESGSQFEFTQFRKPSYILQKSTFEVPENQMTILKTTSEECRDADLHV FT IMNAPSIGQVDSSKQFEGTVEIKRKFAGLLKNDCNKSASGYLTDENEVGFRGFYSAHGT FT KLNVSTEALQKAVKLFSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVS FT EKNNKCQLILQNNIEMTTGTFVEEITENYKRNTENEDNKYTAASRNSHNLEFDGSDSSK FT NDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVAKAQEACHGN FT TSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAKESFNKIVNFFDQKPEELHNFS FT LNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKIKEPT FT LLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELA FT CETIEITAAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVK FT VHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLREGI FT FDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEV FT YNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAYPQTVNEDICVEELVT FT SSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASGKIVCVSHETIKKVKDIFTDSFSKVI FT KENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHN FT QNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSANTCGIFSTASGKSVQVSDAS FT LQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLISQKGFSYNVVN FT SSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPRVD FT KRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGT FT KVSLVENIHVLGKEQASPKNVKMEIGKTETFSDVPVKTNIEVCSTYSKDSENYFETEAV FT EIAKAFMEDDELTDSKLPSHATHSLFTCPENEEMVLSNSRIGKRRGEPLILVGEPSIKR FT NLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKERQEIQN FT PNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTGRPTKV FT FVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKNNSNQ FT AVAVTFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISL FT KAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLA FT DGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKE FT FANRCLSPERVLLQLKYRYDTEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANI FT SETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELV FT GSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCV FT DVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHE FT ENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQML FT NDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSD FT LYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQIYQPREP FT LHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDI FT IKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDIL FT CNEAENKLMHILHANDPKWSTPTKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLS FT LCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFV FT SPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINT FT QALLSGSTGEKQFISVSESTRTAPTSSEDYLRLKRRCTTSLIKEQESSQASTEECEKNK FT QDTITTKKYI" FT misc_feature 32941949..32942001 FT /note="Sequence from overlapping clone bA298P3 (AL137247). FT Assembly confirmed by restriction digest data" FT misc_feature 32942002..32942035 FT /note="Sequence from overlapping clone bA298P3 (AL137247). FT Assembly confirmed by restriction digest data" FT misc_feature 32942036..32942062 FT /note="Sequence from overlapping clone bA298P3 (AL137247). FT Assembly confirmed by restriction digest data" FT misc_feature 32947519..32947547 FT /note="Sequence from overlapping clone bA298P3 FT (AL137247).Assembly confirmed by restriction digest data" FT mRNA join(32953977..32954050,32954144..32954282, FT 32968826..32969070,32970128..32970253,32971035..32971181, FT 32972299..32972409) FT /gene="BRCA2" FT /locus_tag="RP11-298P3.3-002" FT /product="breast cancer 2, early onset" FT /note="match: ESTs: Em:BE869603" FT CDS 32958797..32960245 FT /pseudo FT /locus_tag="RP11-37E23.3-001" FT /product="interferon-induced protein with tetratricopeptide FT repeats 1 (IFIT1) pseudogene" FT /note="match: proteins: Sw:P09914 Tr:Q9JJT1" FT misc_feature 32961799 FT /note="Clone_right_end: RP1-214K23" FT misc_feature 32972506 FT /note="Clone_right_end: RP11-37E23" FT misc_feature 32972607..33052012 FT /note="annotated region of clone" FT mRNA complement(join(33006554..33007109,33010498..33010542, FT 33012789..33012874,33016525..33018263,33020496..33020617, FT AL353665.13:112..273,AL353665.13:453..500, FT AL353665.13:2815..2862)) FT /locus_tag="RP11-298P3.4-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA593603 Em:AA737293 Em:AA778631 FT Em:AI718289 Em:AU137161 Em:AV726785 Em:AW243426 Em:BM055268 FT Em:BM887924" FT /note="match: cDNAs: Em:AL049802 Em:AL049802.1 Em:U50529 FT Em:U50529.1" FT polyA_site complement(32975713) FT polyA_signal complement(32975739..32975744) FT polyA_site complement(32975810) FT polyA_signal complement(32975828..32975833) FT polyA_site complement(32975869) FT polyA_signal complement(32975892..32975897) FT mRNA complement(join(32975814..32977337,32978458..32978534, FT 32981387..32981475,32981782..32981909,32985665..32985729, FT 32990096..32990166,32990688..32990840)) FT /locus_tag="RP11-298P3.2-003" FT /product="novel protein" FT /note="match: cDNAs: Em:AL049788" FT mRNA complement(join(32975953..32976038,32977045..32977337, FT 32978458..32978534,32981387..32981475,32981782..32981909, FT 33002041..33002270)) FT /locus_tag="RP11-298P3.2-002" FT /product="novel protein" FT /note="match: cDNAs: Em:AL049786.1" FT mRNA complement(join(32975954..32976038,32977287..32977337, FT 32978458..32978534,32981387..32981475,32981782..32981909, FT 33002041..33002151)) FT /locus_tag="RP11-298P3.2-004" FT /product="novel protein" FT /note="match: ESTs: Em:AA931559 Em:BE468215 Em:BF448179" FT mRNA complement(join(32975814..32977337,32978340..32978408, FT 32981387..32981475,32981782..32981909,33002041..33002270)) FT /locus_tag="RP11-298P3.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AI684803.1 Em:BG699837.1 FT Em:DR006425.1" FT /note="match: cDNAs: Em:AL049787.1 Em:U50527.1" FT CDS complement(join(32977281..32977337,32978340..32978408, FT 32981387..32981475,32981782..32981909,33002041..33002219)) FT /locus_tag="RP11-298P3.2-001" FT /standard_name="OTTHUMP00000018226" FT /product="novel protein" FT /note="match: proteins: Tr:Q29S05.1 Tr:Q5TBK0.1" FT /protein_id="CAI13191.1" FT /translation="MEDSFLQSFGRLSLQPQQQQQRQRPPRPPPRGTPPRRHSFRKHLY FT LLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRAR FT KAMRNGISPIIIDNTNLHAWEMKPYAVMVFQTEQKNLFRLEMDMVVFRPEMKKHSWCLK FT RKNPPNERTV" FT CDS complement(join(32977079..32977337,32978458..32978534, FT 32981387..32981475,32981782..32981909,33002041..33002219)) FT /locus_tag="RP11-298P3.2-002" FT /standard_name="OTTHUMP00000018227" FT /product="novel protein" FT /note="match: proteins: Tr:Q5TBK1.1" FT /protein_id="CAI13190.1" FT /translation="MEDSFLQSFGRLSLQPQQQQQRQRPPRPPPRGTPPRRHSFRKHLY FT LLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRAR FT KAMRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIHG FT VSREKIHRMKERYEHDVTFHSVLHAEKPSRMNRNQDRNNALPSNNARYWNSYTEFPNRR FT AHGGFTNESSYHRRGGCHHGY" FT mRNA complement(join(<32977816..32977898,32978458..32978534, FT 32981387..32981475,32981782..32981909,33002041..>33002151)) FT /locus_tag="RP11-298P3.2-005" FT /product="novel protein" FT /note="match: ESTs: Em:AI682225 Em:AI684803" FT CDS complement(join(<32977816..32977898,32978458..32978534, FT 32981387..32981475,32981782..32981909,33002041..>33002151)) FT /codon_start=2 FT /locus_tag="RP11-298P3.2-005" FT /standard_name="OTTHUMP00000018229" FT /product="novel protein" FT /protein_id="CAI13192.1" FT /translation="RPPRPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLARQLQHDFPR FT ALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRARKAMRNGISPIIIDNTNLHAWEMK FT PYAVMALENNYEVIFREPDTRWKFNVQELARQIVSSKWICGLLHQNCLRWLLKSEFMD" FT mRNA complement(join(32980590..32981909,33002041..33002143)) FT /locus_tag="RP11-298P3.2-007" FT /product="novel protein" FT /note="match: cDNAs: Em:AF113009" FT mRNA complement(join(32999059..33000092,33002041..33002151)) FT /locus_tag="RP11-298P3.2-006" FT /product="novel protein" FT /note="match: ESTs: Em:AA761896 Em:AI017069 Em:AI554027 FT Em:AI681179 Em:AW590485 Em:AW977630 Em:BF061850 Em:BF433332 FT Em:BF448287 Em:BF912849 Em:BG656414" FT mRNA complement(join(32999495..33000092,33006926..33007091)) FT /locus_tag="RP11-298P3.2-008" FT /product="novel protein" FT /note="match: ESTs: Em:BG191332" FT mRNA complement(join(33018103..33018263,AL353665.13:2815..2862, FT AL353665.13:40082..40145)) FT /locus_tag="RP11-298P3.4-002" FT /product="novel protein" FT /note="match: ESTs: Em:BE708497.1" FT CDS complement(join(33010519..33010542,33012789..33012874, FT 33016525..33018263,33020496..33020554)) FT /locus_tag="RP11-298P3.4-001" FT /standard_name="OTTHUMP00000018231" FT /product="novel protein" FT /note="match: proteins: Tr:Q96KV2 Tr:Q9Y3H6" FT /protein_id="CAI13193.1" FT /translation="MNFITDIAPWTATRTFTGIRERVLKKTGHRLSKTKQKRNRKRNKK FT QNSQNRIMEENSLEFLSDLTPGDQDPSQSEEEDIEKTRRESEYPFIDGLQNEVGDFVTG FT YKEKRWKNKDPKDSFQNVMSIVELDNTPKNYLSKEGDNLFVSLLLRPNEISVTCPILTQ FT NLSCVTTDDCSGMKVEKHIRNRHTIALDTQDLSAETSCLFMKKREIVDKNLSHEPILCH FT QHGIRMSDKVLREEQVYTTKINHWAFFTTNLSDEDLQLGSDRQPYFGSWPAGPHKFICE FT QRPKKDRACKLAGPDSRGQWIQMIFTSVAASEPGNNPEILTDKLLIGNEDFSPPPETMD FT SFIETNLFRSCLPQPDIPKNALESTKNKKRRKKRIFNLVPNFDLLGQSRIGVKEREKCD FT LLTKNHGLKITLGEEKDRISERNSEEENKQKLMTFDHHPLWFYLDIIKATPLNIDGQRY FT SHCLSFNRLRCSASLYKNYIPSFVLHNLSSIWKPSFTNKKLFLTFESQTRVGNKLNDAG FT FISPEILHSHPDTSCSLGVTSDFHFLNERFDRKLKRWEEPKELPAEDSQDLTSTDYRSL FT ELPLSQGFAFQLVKLFGSPGVPMESLLPDDYVVPLDWKTLKMIYLQWKMSVEKRQKKIG FT " FT misc_feature 33025966 FT /note="Clone_left_end: RP11-11K16" FT CDS join(33051411..33052012,AL353665.13:101..1066) FT /pseudo FT /locus_tag="RP11-298P3.1-001" FT /product="ATPase pseudogene" FT /note="match: proteins: Sw:O43520 Sw:O60423 Sw:P32660 FT Sw:P70704 Sw:P98204 Sw:Q09891 Sw:Q12674 Sw:Q12675 Sw:Q8NB49 FT Sw:Q9LI83 Sw:Q9LK90 Sw:Q9LNQ4 Sw:Q9LVK9 Sw:Q9N0Z4 Sw:Q9SAF5 FT Sw:Q9SLK6 Sw:Q9SX33 Sw:Q9XIE6 Sw:Q9Y2Q0 Tr:O36028 Tr:O77368 FT Tr:Q96UW1 Tr:Q9P424 Tr:Q9U280 Tr:Q9VGD4" FT misc_feature 33051912 FT /note="Clone_right_end: RP11-298P3" FT mRNA join(AL445212.9:83662..83855,AL445212.9:84610..84715, FT AL445212.9:87265..87513,AL445212.9:93264..93372, FT AL445212.9:94289..94338,AL445212.9:94430..94470, FT AL445212.9:94687..94801,AL445212.9:97631..97680, FT AL445212.9:99107..99218,AL445212.9:100460..101575, FT AL445212.9:104453..109384,AL445212.9:112746..112841, FT AL445212.9:115015..115084,AL445212.9:123049..123476, FT AL445212.9:124616..124797,AL445212.9:125930..126117, FT AL445212.9:130711..130881,AL445212.9:131367..131721, FT AL445212.9:138590..138745,AL445212.9:139144..139288, FT AL445212.9:144858..144979,AL445212.9:147505..147703, FT AL445212.9:147938..148101,AL445212.9:148195..148333, FT AL445212.9:162877..163121,AL445212.9:165086..165232, FT AL445212.9:166350..166657,32972607..32973347) FT /gene="BRCA2" FT /locus_tag="RP11-298P3.3-001" FT /product="breast cancer 2, early onset" FT /note="match: ESTs: Em:AA215820.1 Em:AL601892.1 FT Em:BG772619.1 Em:BG773127.1 Em:BM839248.1 Em:BP220720.1 FT Em:BP289480.1 Em:BQ226936.1 Em:BQ439258.1 Em:BX496533.1 FT Em:BY798783.2 Em:CF143354.1 Em:CN409236.1 Em:DB074188.1" FT /note="match: cDNAs: Em:U43746.1" FT CDS join(AL445212.9:84649..84715,AL445212.9:87265..87513, FT AL445212.9:93264..93372,AL445212.9:94289..94338, FT AL445212.9:94430..94470,AL445212.9:94687..94801, FT AL445212.9:97631..97680,AL445212.9:99107..99218, FT AL445212.9:100460..101575,AL445212.9:104453..109384, FT AL445212.9:112746..112841,AL445212.9:115015..115084, FT AL445212.9:123049..123476,AL445212.9:124616..124797, FT AL445212.9:125930..126117,AL445212.9:130711..130881, FT AL445212.9:131367..131721,AL445212.9:138590..138745, FT AL445212.9:139144..139288,AL445212.9:144858..144979, FT AL445212.9:147505..147703,AL445212.9:147938..148101, FT AL445212.9:148195..148333,AL445212.9:162877..163121, FT AL445212.9:165086..165232,AL445212.9:166350..166657, FT 32972607..32972907) FT /gene="BRCA2" FT /locus_tag="RP11-298P3.3-001" FT /standard_name="OTTHUMP00000018803" FT /product="breast cancer 2, early onset" FT /note="match: proteins: Sw:P51587.2 Tr:Q5TBJ7.1" FT /protein_id="CAI13195.1" FT /translation="MPIGSKERPTFFEIFKTRCNKADLGPISLNWFEELSSEAPPYNSE FT PAEESEHKNNNYEPNLFKTPQRKPSYNQLASTPIIFKEQGLTLPLYQSPVKELDKFKLD FT LGRNVPNSRHKSLRTVKTKMDQADDVSCPLLNSCLSESPVVLQCTHVTPQRDKSVVCGS FT LFHTPKFVKGRQTPKHISESLGAEVDPDMSWSSSLATPPTLSSTVLIVRNEEASETVFP FT HDTTANVKSYFSNHDESLKKNDRFIASVTDSENTNQREAASHGFGKTSGNSFKVNSCKD FT HIGKSMPNVLEDEVYETVVDTSEEDSFSLCFSKCRTKNLQKVRTSKTRKKIFHEANADE FT CEKSKNQVKEKYSFVSEVEPNDTDPLDSNVANQKPFESGSDKISKEVVPSLACEWSQLT FT LSGLNGAQMEKIPLLHISSCDQNISEKDLLDTENKRKKDFLTSENSLPRISSLPKSEKP FT LNEETVVNKRDEEQHLESHTDCILAVKQAISGTSPVASSFQGIKKSIFRIRESPKETFN FT ASFSGHMTDPNFKKETEASESGLEIHTVCSQKEDSLCPNLIDNGSWPATTTQNSVALKN FT AGLISTLKKKTNKFIYAIHDETSYKGKKIPKDQKSELINCSAQFEANAFEAPLTFANAD FT SGLLHSSVKRSCSQNDSEEPTLSLTSSFGTILRKCSRNETCSNNTVISQDLDYKEAKCN FT KEKLQLFITPEADSLSCLQEGQCENDPKSKKVSDIKEEVLAAACHPVQHSKVEYSDTDF FT QSQKSLLYDHENASTLILTPTSKDVLSNLVMISRGKESYKMSDKLKGNNYESDVELTKN FT IPMEKNQDVCALNENYKNVELLPPEKYMRVASPSRKVQFNQNTNLRVIQKNQEETTSIS FT KITVNPDSEELFSDNENNFVFQVANERNNLALGNTKELHETDLTCVNEPIFKNSTMVLY FT GDTGDKQATQVSIKKDLVYVLAEENKNSVKQHIKMTLGQDLKSDISLNIDKIPEKNNDY FT MNKWAGLLGPISNHSFGGSFRTASNKEIKLSEHNIKKSKMFFKDIEEQYPTSLACVEIV FT NTLALDNQKKLSKPQSINTVSAHLQSSVVVSDCKNSHITPQMLFSKQDFNSNHNLTPSQ FT KAEITELSTILEESGSQFEFTQFRKPSYILQKSTFEVPENQMTILKTTSEECRDADLHV FT IMNAPSIGQVDSSKQFEGTVEIKRKFAGLLKNDCNKSASGYLTDENEVGFRGFYSAHGT FT KLNVSTEALQKAVKLFSDIENISEETSAEVHPISLSSSKCHDSVVSMFKIENHNDKTVS FT EKNNKCQLILQNNIEMTTGTFVEEITENYKRNTENEDNKYTAASRNSHNLEFDGSDSSK FT NDTVCIHKDETDLLFTDQHNICLKLSGQFMKEGNTQIKEDLSDLTFLEVAKAQEACHGN FT TSNKEQLTATKTEQNIKDFETSDTFFQTASGKNISVAKESFNKIVNFFDQKPEELHNFS FT LNSELHSDIRKNKMDILSYEETDIVKHKILKESVPVGTGNQLVTFQGQPERDEKIKEPT FT LLGFHTASGKKVKIAKESLDKVKNLFDEKEQGTSEITSFSHQWAKTLKYREACKDLELA FT CETIEITAAPKCKEMQNSLNNDKNLVSIETVVPPKLLSDNLCRQTENLKTSKSIFLKVK FT VHENVEKETAKSPATCYTNQSPYSVIENSALAFYTSCSRKTSVSQTSLLEAKKWLREGI FT FDGQPERINTADYVGNYLYENNSNSTIAENDKNHLSEKQDTYLSNSSMSNSYSYHSDEV FT YNDSGYLSKNKLDSGIEPVLKNVEDQKNTSFSKVISNVKDANAYPQTVNEDICVEELVT FT SSSPCKNKNAAIKLSISNSNNFEVGPPAFRIASGKIVCVSHETIKKVKDIFTDSFSKVI FT KENNENKSKICQTKIMAGCYEALDDSEDILHNSLDNDECSTHSHKVFADIQSEEILQHN FT QNMSGLEKVSKISPCDVSLETSDICKCSIGKLHKSVSSANTCGIFSTASGKSVQVSDAS FT LQNARQVFSEIEDSTKQVFSKVLFKSNEHSDQLTREENTAIRTPEHLISQKGFSYNVVN FT SSAFSGFSTASGKQVSILESSLHKVKGVLEEFDLIRTEHSLHYSPTSRQNVSKILPRVD FT KRNPEHCVNSEMEKTCSKEFKLSNNLNVEGGSSENNHSIKVSPYLSQFQQDKQQLVLGT FT KVSLVENIHVLGKEQASPKNVKMEIGKTETFSDVPVKTNIEVCSTYSKDSENYFETEAV FT EIAKAFMEDDELTDSKLPSHATHSLFTCPENEEMVLSNSRIGKRRGEPLILVGEPSIKR FT NLLNEFDRIIENQEKSLKASKSTPDGTIKDRRLFMHHVSLEPITCVPFRTTKERQEIQN FT PNFTAPGQEFLSKSHLYEHLTLEKSSSNLAVSGHPFYQVSATRNEKMRHLITTGRPTKV FT FVPPFKTKSHFHRVEQCVRNINLEENRQKQNIDGHGSDDSKNKINDNEIHQFNKNNSNQ FT AVAVTFTKCEEEPLDLITSLQNARDIQDMRIKKKQRQRVFPQPGSLYLAKTSTLPRISL FT KAAVGGQVPSACSHKQLYTYGVSKHCIKINSKNAESFQFHTEDYFGKESLWTGKGIQLA FT DGGWLIPSNDGKAGKEEFYRALCDTPGVDPKLISRIWVYNHYRWIIWKLAAMECAFPKE FT FANRCLSPERVLLQLKYRYDTEIDRSRRSAIKKIMERDDTAAKTLVLCVSDIISLSANI FT SETSSNKTSSADTQKVAIIELTDGWYAVKAQLDPPLLAVLKNGRLTVGQKIILHGAELV FT GSPDACTPLEAPESLMLKISANSTRPARWYTKLGFFPDPRPFPLPLSSLFSDGGNVGCV FT DVIIQRAYPIQWMEKTSSGLYIFRNEREEEKEAAKYVEAQQKRLEALFTKIQEEFEEHE FT ENTTKPYLPSRALTRQQVRALQDGAELYEAVKNAADPAYLEGYFSEEQLRALNNHRQML FT NDKKQAQIQLEIRKAMESAEQKEQGLSRDVTTVWKLRIVSYSKKEKDSVILSIWRPSSD FT LYSLLTEGKRYRIYHLATSKSKSKSERANIQLAATKKTQYQQLPVSDEILFQIYQPREP FT LHFSKFLDPDFQPSCSEVDLIGFVVSVVKKTGLAPFVYLSDECYNLLAIKFWIDLNEDI FT IKPHMLIAASNLQWRPESKSGLLTLFAGDFSVFSASPKEGHFQETFNKMKNTVENIDIL FT CNEAENKLMHILHANDPKWSTPTKDCTSGPYTAQIIPGTGNKLLMSSPNCEIYYQSPLS FT LCMAKRKSVSTPVSAQMTSKSCKGEKEIDDQKNCKKRRALDFLSRLPLPPPVSPICTFV FT SPAAQKAFQPPRSCGTKYETPIKKKELNSPQMTPFKKFNEISLLESNSIADEELALINT FT QALLSGSTGEKQFISVSESTRTAPTSSEDYLRLKRRCTTSLIKEQESSQASTEECEKNK FT QDTITTKKYI" FT misc_feature 33052013..33117912 FT /note="annotated region of clone" FT mRNA complement(join(AL137247.14:34048..34603, FT AL137247.14:37992..38036,AL137247.14:40283..40368, FT AL137247.14:44019..45757,AL137247.14:47990..48111, FT 33052024..33052185,33052365..33052412,33054727..33054774)) FT /locus_tag="RP11-298P3.4-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA593603 Em:AA737293 Em:AA778631 FT Em:AI718289 Em:AU137161 Em:AV726785 Em:AW243426 Em:BM055268 FT Em:BM887924" FT /note="match: cDNAs: Em:AL049802 Em:AL049802.1 Em:U50529 FT Em:U50529.1" FT mRNA complement(join(33066436..33067206,33067572..33068027, FT 33070344..33072629)) FT /locus_tag="RP11-11K16.3-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AL049782" FT polyA_site complement(33091031) FT polyA_signal complement(33091047..33091052) FT mRNA complement(join(AL137247.14:45597..45757, FT 33054727..33054774,33091994..33092057)) FT /locus_tag="RP11-298P3.4-002" FT /product="novel protein" FT /note="match: ESTs: Em:BE708497.1" FT CDS complement(join(33091939..33092140,33095510..33095586, FT 33096319..33096407,33101545..33101669,33109906..33111164)) FT /gene="RP11-11K16.4" FT /locus_tag="RP11-11K16.4-001" FT /standard_name="OTTHUMP00000018230" FT /product="phosphonoformate immuno-associated protein 5" FT /note="match: proteins: Sw:Q92802.1" FT /protein_id="CAI11042.1" FT /translation="MSYGEIEGKFLGPREEVTSEPRCKKLKSTTESYVFHNHSNADFHR FT IQEKTGNDWVPVTIIDVRGHSYLQENKIKTTDLHRPLHDEMPGNRPDVIESIDSQVLQE FT ARPPLVSADDEIYSTSKAFIGPIYKPPEKKKRNEGRNEAHVLNGINDRGGQKEKQKFNS FT EKSEIDNELFQFYKEIEELEKEKDGFENSCKESEPSQEQFVPFYEGHNNGLLKPDEEKK FT DLSNKAMPSHCDYQQNLGNEPDKYPCNGQVIPTFCDTSFTSFRPEWQSVYPFIVPYGPP FT LPSLNYHLNIQRFSGPPNPPSNIFQAQDDSQIQNGYYVNNCHVNWNCMTFDQNNEYTDC FT SENRSSVHPSGNGCSMQDRYVSNGFCEVRERCWKDHCMDKHNGTDRFVNQQFQEEKLNK FT LQKLLILLRGLPGSGKTTLSRILLGQNRDGIVFSTDDYFHHQDGYRYNVNQLGDAHDWN FT QNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEK FT RNKHGVSRKKIAQMLDRYEYQMSISIVMNSVEPSHKSTQRPPPPQGRQRWGGSLGSHNR FT VCVTNNH" FT mRNA complement(join(33092012..33092140,33096319..33096407, FT 33101545..33101669,33109906..33110006)) FT /gene="RP11-11K16.4" FT /locus_tag="RP11-11K16.4-002" FT /product="phosphonoformate immuno-associated protein 5" FT /note="match: ESTs: Em:AW464719.1" FT mRNA complement(join(33091031..33092140,33095510..33095586, FT 33096319..33096407,33101545..33101669,33109906..33111164, FT 33112755..33112919)) FT /gene="RP11-11K16.4" FT /locus_tag="RP11-11K16.4-001" FT /product="phosphonoformate immuno-associated protein 5" FT /note="match: ESTs: Em:BM413670.1 Em:BU073707.1 FT Em:BX327936.2 Em:BY796849.1 Em:CX164175.1" FT /note="match: cDNAs: Em:AL049783.1 Em:BC010643.1 FT Em:CR857283.1 Em:U50532.1" FT mRNA complement(join(33110564..33111164,33112755..33112821, FT 33112915..33112962)) FT /gene="RP11-11K16.4" FT /locus_tag="RP11-11K16.4-003" FT /product="phosphonoformate immuno-associated protein 5" FT /note="match: ESTs: Em:BI561959.1" FT misc_feature 33117713 FT /note="Clone_left_end: RP1-26H23" FT CDS join(AL137247.14:78905..79506,33052013..33052978) FT /pseudo FT /locus_tag="RP11-298P3.1-001" FT /product="ATPase pseudogene" FT /note="match: proteins: Sw:O43520 Sw:O60423 Sw:P32660 FT Sw:P70704 Sw:P98204 Sw:Q09891 Sw:Q12674 Sw:Q12675 Sw:Q8NB49 FT Sw:Q9LI83 Sw:Q9LK90 Sw:Q9LNQ4 Sw:Q9LVK9 Sw:Q9N0Z4 Sw:Q9SAF5 FT Sw:Q9SLK6 Sw:Q9SX33 Sw:Q9XIE6 Sw:Q9Y2Q0 Tr:O36028 Tr:O77368 FT Tr:Q96UW1 Tr:Q9P424 Tr:Q9U280 Tr:Q9VGD4" FT misc_feature 33117913..33209647 FT /note="annotated region of clone" FT mRNA join(33160564..33160730,Z75889.1:13348..13474, FT Z75889.1:16398..16601,Z75889.1:22833..22919, FT Z75889.1:23028..23125,Z75889.1:23748..23874, FT Z75889.1:32358..32438,Z75889.1:37810..37950, FT Z75889.1:40438..40553,Z75889.1:43429..43523, FT Z75889.1:48472..48617,Z75889.1:51728..51879, FT Z75889.1:53050..53163,Z75889.1:58817..58898, FT Z75889.1:61448..61496,Z75889.1:64324..64463, FT Z75889.1:65917..66032,Z75889.1:71528..71633, FT Z75889.1:74540..74700,Z75889.1:96695..96818, FT Z75889.1:99766..99924,Z75889.1:105675..105743, FT Z75889.1:107186..107322,Z75889.1:110572..110695, FT AL138820.11:3805..4009,AL138820.11:6315..6429, FT AL138820.11:8560..8692,AL138820.11:9007..9126, FT AL138820.11:10101..10163,AL138820.11:11048..11193, FT AL138820.11:14962..15067,AL138820.11:20594..21033, FT AL138820.11:21127..21234,AL138820.11:23662..23797, FT AL138820.11:25490..28492) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-006" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:AB023196.2 Em:AL137201.1 FT Em:U50533.1" FT /note="match: ESTs: Em:BX503455.1 Em:DA856411.1 FT Em:T51543.1" FT mRNA join(33160592..33160730,Z75889.1:13348..13474, FT Z75889.1:16398..16601,Z75889.1:22833..22943) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-011" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: ESTs: Em:DB200933.1" FT mRNA join(33160680..33160730,Z75889.1:13348..13474, FT Z75889.1:16398..16601,Z75889.1:22833..22919, FT Z75889.1:23028..23125,Z75889.1:23748..23874, FT Z75889.1:32358..32438,Z75889.1:37810..37950, FT Z75889.1:40438..40553,Z75889.1:43429..43523, FT Z75889.1:48472..48617,Z75889.1:51728..51879, FT Z75889.1:53050..55862) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-009" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:BC039256.1" FT mRNA join(33160685..33160730,Z75889.1:13348..13474, FT Z75889.1:16398..16601,Z75889.1:22833..22919, FT Z75889.1:23028..23125,Z75889.1:23748..23874, FT Z75889.1:32358..32438,Z75889.1:37810..37950, FT Z75889.1:40438..40553,Z75889.1:43429..43523, FT Z75889.1:48472..48617,Z75889.1:51728..51879, FT Z75889.1:53050..53163,Z75889.1:58817..58898, FT Z75889.1:61448..61496,Z75889.1:64324..64463, FT Z75889.1:65917..66032,Z75889.1:71528..71633, FT Z75889.1:74540..74700,Z75889.1:96695..96818, FT Z75889.1:99766..99924,Z75889.1:105675..105743, FT Z75889.1:107186..107322,Z75889.1:110572..110695, FT AL138820.11:3805..4009,AL138820.11:6315..6429, FT AL138820.11:8560..8692,AL138820.11:9007..9126, FT AL138820.11:10101..10163,AL138820.11:11048..11193, FT AL138820.11:14962..15067,AL138820.11:20594..21033, FT AL138820.11:21127..21351,AL138820.11:25490..26381) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-007" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:U95825.2" FT mRNA join(33160688..33160730,Z75889.1:13348..13474, FT Z75889.1:16398..17199) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-008" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:BC070274.1" FT /note="match: ESTs: Em:AV710229.1 Em:BU930321.1" FT mRNA join(33160706..33160730,Z75889.1:13348..15211) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-002" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:BC026240.2" FT /note="match: ESTs: Em:BG546853.1" FT misc_feature 33209648..33323247 FT /note="annotated region of clone" FT CDS join(33222910..33223017,33225941..33226144, FT 33232376..33232462,33232571..33232668,33233291..33233417, FT 33241901..33241981,33247353..33247493,33249981..33250096, FT 33252972..33253066,33258015..33258160,33261271..33261422, FT 33262593..33262706,33268360..33268441,33270991..33271039, FT 33273867..33274006,33275460..33275575,33281071..33281176, FT 33284083..33284243,33306238..33306361,33309309..33309467, FT 33315218..33315286,33316729..33316865,33320115..33320238, FT AL138820.11:3805..4009,AL138820.11:6315..6429, FT AL138820.11:8560..8692,AL138820.11:9007..9126, FT AL138820.11:10101..10163,AL138820.11:11048..11193, FT AL138820.11:14962..15067,AL138820.11:20594..21033, FT AL138820.11:21127..21234,AL138820.11:23662..23797, FT AL138820.11:25490..25525) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-006" FT /standard_name="OTTHUMP00000018232" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: proteins: Sw:Q6TRW4.2 Sw:Q9NTI5.1" FT /protein_id="CAI10806.2" FT /translation="MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDM FT DQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLK FT DIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFS FT VINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALL FT KRTAQAIEPYITNFFNQVLMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKL FT KSNDNEERLQVVKLLAKMFGAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHC FT LMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLD FT KRWRVRKEAMMGLAQIYKKYALQSAAGKDAAKQIAWIKDKLLHIYYQNSIDDRLLVERI FT FAQYMVPHNLETTERMKCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPK FT TDASVKAIFSKVMVITRNLPDPGKAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQA FT EGCVREITKKLGNPKQPTNPFLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADD FT EDEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKN FT TGSKIEEDFPHIRSALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHK FT SLDPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKLW FT VPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKIS FT KPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGL FT SRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLLSLLPE FT YVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIK FT QTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKSTTYSLESPKDPVLPARFFTQPDKNFSN FT TKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSSAGKQSQTKSSRMETVSNASSSSNPSS FT PGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDKRDDSDLVRSELEKPRGRKKTPVTEQ FT EEKLGMDDLTKLVQEQKPKGSQRSRKRGHTASESDEQQWPEEKRLKEDILENEDEQNSP FT PKKGKRGRPPKPLGGGTPKEEPTMKTSKKGSKKKSGPPAPEEEEEEERQSGNTEQKSKS FT KQHRVSRRAQQRAESPESSAIESTQSTPQKGRGRPSKTPSPSQPKKNVRVGRSKQAATK FT ENDSSEEVDVFQGSSPVDDIPQEETEEEEVSTVNVRRRSAKRERR" FT mRNA join(Z84467.1:42752..42918,33222891..33223017, FT 33225941..33226144,33232376..33232462,33232571..33232668, FT 33233291..33233417,33241901..33241981,33247353..33247493, FT 33249981..33250096,33252972..33253066,33258015..33258160, FT 33261271..33261422,33262593..33262706,33268360..33268441, FT 33270991..33271039,33273867..33274006,33275460..33275575, FT 33281071..33281176,33284083..33284243,33306238..33306361, FT 33309309..33309467,33315218..33315286,33316729..33316865, FT 33320115..33320238,AL138820.11:3805..4009, FT AL138820.11:6315..6429,AL138820.11:8560..8692, FT AL138820.11:9007..9126,AL138820.11:10101..10163, FT AL138820.11:11048..11193,AL138820.11:14962..15067, FT AL138820.11:20594..21033,AL138820.11:21127..21234, FT AL138820.11:23662..23797,AL138820.11:25490..28492) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-006" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:AB023196.2 Em:AL137201.1 FT Em:U50533.1" FT /note="match: ESTs: Em:BX503455.1 Em:DA856411.1 FT Em:T51543.1" FT mRNA join(Z84467.1:42780..42918,33222891..33223017, FT 33225941..33226144,33232376..33232486) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-011" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: ESTs: Em:DB200933.1" FT mRNA join(Z84467.1:42868..42918,33222891..33223017, FT 33225941..33226144,33232376..33232462,33232571..33232668, FT 33233291..33233417,33241901..33241981,33247353..33247493, FT 33249981..33250096,33252972..33253066,33258015..33258160, FT 33261271..33261422,33262593..33265405) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-009" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:BC039256.1" FT mRNA join(Z84467.1:42873..42918,33222891..33223017, FT 33225941..33226144,33232376..33232462,33232571..33232668, FT 33233291..33233417,33241901..33241981,33247353..33247493, FT 33249981..33250096,33252972..33253066,33258015..33258160, FT 33261271..33261422,33262593..33262706,33268360..33268441, FT 33270991..33271039,33273867..33274006,33275460..33275575, FT 33281071..33281176,33284083..33284243,33306238..33306361, FT 33309309..33309467,33315218..33315286,33316729..33316865, FT 33320115..33320238,AL138820.11:3805..4009, FT AL138820.11:6315..6429,AL138820.11:8560..8692, FT AL138820.11:9007..9126,AL138820.11:10101..10163, FT AL138820.11:11048..11193,AL138820.11:14962..15067, FT AL138820.11:20594..21033,AL138820.11:21127..21351, FT AL138820.11:25490..26381) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-007" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:U95825.2" FT mRNA join(Z84467.1:42876..42918,33222891..33223017, FT 33225941..33226742) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-008" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:BC070274.1" FT /note="match: ESTs: Em:AV710229.1 Em:BU930321.1" FT mRNA join(Z84467.1:42894..42918,33222891..33224754) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-002" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:BC026240.2" FT /note="match: ESTs: Em:BG546853.1" FT mRNA join(33275121..33275575,33281071..33281176, FT 33284083..33284205) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-004" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: ESTs: Em:AA687846.1 Em:BF222521.1 FT Em:CA394375.1" FT misc_feature 33323248..33323665 FT /note="annotated region of clone" FT misc_feature 33323666..33492152 FT /note="annotated region of clone" FT misc_feature 33323666 FT /note="Clone_left_end: RP11-380B4" FT mRNA join(<33332307..33332357,33332672..33332791, FT 33333766..33333828,33334713..33334858,33338627..33338726, FT 33344259..>33344684) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-012" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: ESTs: Em:DA165662.1 Em:DA296481.1" FT CDS join(<33332307..33332357,33332672..33332791, FT 33333766..33333828,33334713..33334858,33338627..33338726, FT 33344259..>33344684) FT /codon_start=1 FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-012" FT /standard_name="OTTHUMP00000197490" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /protein_id="CAP58848.1" FT /translation="IKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKSTTYSLESPKDP FT VLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSSAGKQSQTKSS FT RMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDKRDDSDLSEL FT EKPRGRKKTPVTEQEEKLGMDDLTKLVQEQKPKGSQRSRKRGHTASESDEQQWPEEKRL FT KEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTMKTSKKGSKKKSGPPAPEEEEE FT EERQSGNTEQKSKSKQHRVSR" FT CDS join(Z75889.1:13367..13474,Z75889.1:16398..16601, FT Z75889.1:22833..22919,Z75889.1:23028..23125, FT Z75889.1:23748..23874,Z75889.1:32358..32438, FT Z75889.1:37810..37950,Z75889.1:40438..40553, FT Z75889.1:43429..43523,Z75889.1:48472..48617, FT Z75889.1:51728..51879,Z75889.1:53050..53163, FT Z75889.1:58817..58898,Z75889.1:61448..61496, FT Z75889.1:64324..64463,Z75889.1:65917..66032, FT Z75889.1:71528..71633,Z75889.1:74540..74700, FT Z75889.1:96695..96818,Z75889.1:99766..99924, FT Z75889.1:105675..105743,Z75889.1:107186..107322, FT Z75889.1:110572..110695,33327470..33327674, FT 33329980..33330094,33332225..33332357,33332672..33332791, FT 33333766..33333828,33334713..33334858,33338627..33338732, FT 33344259..33344698,33344792..33344899,33347327..33347462, FT 33349155..33349190) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-006" FT /standard_name="OTTHUMP00000018232" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: proteins: Sw:Q6TRW4.2 Sw:Q9NTI5.1" FT /protein_id="CAH73160.2" FT /translation="MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDM FT DQDSEEEKELYLNLALHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLK FT DIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFS FT VINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALL FT KRTAQAIEPYITNFFNQVLMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKL FT KSNDNEERLQVVKLLAKMFGAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHC FT LMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLD FT KRWRVRKEAMMGLAQIYKKYALQSAAGKDAAKQIAWIKDKLLHIYYQNSIDDRLLVERI FT FAQYMVPHNLETTERMKCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPK FT TDASVKAIFSKVMVITRNLPDPGKAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQA FT EGCVREITKKLGNPKQPTNPFLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADD FT EDEGVPTDQAIRAGLELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKN FT TGSKIEEDFPHIRSALLPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHK FT SLDPSNLEHLITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKLW FT VPDEEVSPETMVKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKIS FT KPDMSRLRLAAGSAIVKLAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGL FT SRLRLPLEYMAICALCAKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLLSLLPE FT YVVPYTIHLLAHDPDYVKVQDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIK FT QTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKSTTYSLESPKDPVLPARFFTQPDKNFSN FT TKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSSAGKQSQTKSSRMETVSNASSSSNPSS FT PGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDKRDDSDLVRSELEKPRGRKKTPVTEQ FT EEKLGMDDLTKLVQEQKPKGSQRSRKRGHTASESDEQQWPEEKRLKEDILENEDEQNSP FT PKKGKRGRPPKPLGGGTPKEEPTMKTSKKGSKKKSGPPAPEEEEEEERQSGNTEQKSKS FT KQHRVSRRAQQRAESPESSAIESTQSTPQKGRGRPSKTPSPSQPKKNVRVGRSKQAATK FT ENDSSEEVDVFQGSSPVDDIPQEETEEEEVSTVNVRRRSAKRERR" FT mRNA join(33344328..33344698,33344792..33345217) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-010" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: ESTs: Em:BI859291.1" FT polyA_signal 33352140..33352145 FT polyA_site 33352157 FT mRNA join(Z84467.1:42752..42918,Z75889.1:13348..13474, FT Z75889.1:16398..16601,Z75889.1:22833..22919, FT Z75889.1:23028..23125,Z75889.1:23748..23874, FT Z75889.1:32358..32438,Z75889.1:37810..37950, FT Z75889.1:40438..40553,Z75889.1:43429..43523, FT Z75889.1:48472..48617,Z75889.1:51728..51879, FT Z75889.1:53050..53163,Z75889.1:58817..58898, FT Z75889.1:61448..61496,Z75889.1:64324..64463, FT Z75889.1:65917..66032,Z75889.1:71528..71633, FT Z75889.1:74540..74700,Z75889.1:96695..96818, FT Z75889.1:99766..99924,Z75889.1:105675..105743, FT Z75889.1:107186..107322,Z75889.1:110572..110695, FT 33327470..33327674,33329980..33330094,33332225..33332357, FT 33332672..33332791,33333766..33333828,33334713..33334858, FT 33338627..33338732,33344259..33344698,33344792..33344899, FT 33347327..33347462,33349155..33352157) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-006" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:AB023196.2 Em:AL137201.1 FT Em:U50533.1" FT /note="match: ESTs: Em:BX503455.1 Em:DA856411.1 FT Em:T51543.1" FT mRNA join(Z84467.1:42873..42918,Z75889.1:13348..13474, FT Z75889.1:16398..16601,Z75889.1:22833..22919, FT Z75889.1:23028..23125,Z75889.1:23748..23874, FT Z75889.1:32358..32438,Z75889.1:37810..37950, FT Z75889.1:40438..40553,Z75889.1:43429..43523, FT Z75889.1:48472..48617,Z75889.1:51728..51879, FT Z75889.1:53050..53163,Z75889.1:58817..58898, FT Z75889.1:61448..61496,Z75889.1:64324..64463, FT Z75889.1:65917..66032,Z75889.1:71528..71633, FT Z75889.1:74540..74700,Z75889.1:96695..96818, FT Z75889.1:99766..99924,Z75889.1:105675..105743, FT Z75889.1:107186..107322,Z75889.1:110572..110695, FT 33327470..33327674,33329980..33330094,33332225..33332357, FT 33332672..33332791,33333766..33333828,33334713..33334858, FT 33338627..33338732,33344259..33344698,33344792..33345016, FT 33349155..33350046) FT /gene="PDS5B" FT /locus_tag="RP1-267P19.1-007" FT /product="PDS5, regulator of cohesion maintenance, homolog FT B (S. cerevisiae)" FT /note="match: cDNAs: Em:U95825.2" FT mRNA complement(join(33451569..33451635,33481032..33481155, FT 33484775..33484858,33485161..33485788)) FT /locus_tag="RP11-380B4.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF966435.1 Em:BF966563 FT Em:BG701472.1" FT misc_feature 33492152 FT /note="Clone_right_end: RP11-380B4" FT misc_feature 33492153..33552211 FT /note="annotated region of clone" FT misc_feature 33519471..33519491 FT /note="Sequence from clone PCR only" FT CDS complement(33528195..>33528539) FT /pseudo FT /locus_tag="RP11-218A18.1-001" FT /product="Mitochondrial import receptor Tom22 pseudogene" FT /note="match: proteins: Sw:Q9NS69" FT /db_xref="PSEUDO:CAH71434.2" FT misc_feature 33552012 FT /note="Clone_left_end: RP11-270H22" FT misc_feature 33552212..33674950 FT /note="annotated region of clone" FT misc_feature 33590278..33590323 FT /note="Sequence confirmed by Z92540 sequenced by SC" FT misc_feature 33590413..33590633 FT /note="Sequence from PAC 197I15 (Z92540) only. sequenced by FT SC" FT mRNA join(33590571..33591397,33627904..33628414, FT 33629184..33629502,33634816..33635917,33637986..33638440) FT /gene="KL" FT /locus_tag="RP11-270H22.1-002" FT /product="klotho" FT /note="match: cDNAs: Em:AF064053" FT mRNA join(33590571..33591397,33627904..33628414, FT 33629184..33629452,33634816..33635917,33637986..33640282) FT /gene="KL" FT /locus_tag="RP11-270H22.1-001" FT /product="klotho" FT /note="match: ESTs: Em:BG699357.1 Em:BU149891.1 FT Em:DA851342.1" FT /note="match: cDNAs: Em:AB005142.1 Em:AF064054.1" FT CDS join(33590579..33591397,33627904..33628414, FT 33629184..33629452,33634816..33635917,33637986..33638323) FT /gene="KL" FT /locus_tag="RP11-270H22.1-001" FT /standard_name="OTTHUMP00000018796" FT /product="klotho" FT /note="match: proteins: Sw:Q9UEF7.2" FT /protein_id="CAH71888.1" FT /translation="MPASAPPRRPRPPPPSLSLLLVLLGLGGRRLRAEPGDGAQTWARF FT SRPPAPEAAGLFQGTFPDGFLWAVGSAAYQTEGGWQQHGKGASIWDTFTHHPLAPPGDS FT RNASLPLGAPSPLQPATGDVASDSYNNVFRDTEALRELGVTHYRFSISWARVLPNGSAG FT VPNREGLRYYRRLLERLRELGVQPVVTLYHWDLPQRLQDAYGGWANRALADHFRDYAEL FT CFRHFGGQVKYWITIDNPYVVAWHGYATGRLAPGIRGSPRLGYLVAHNLLLAHAKVWHL FT YNTSFRPTQGGQVSIALSSHWINPRRMTDHSIKECQKSLDFVLGWFAKPVFIDGDYPES FT MKNNLSSILPDFTESEKKFIKGTADFFALCFGPTLSFQLLDPHMKFRQLESPNLRQLLS FT WIDLEFNHPQIFIVENGWFVSGTTKRDDAKYMYYLKKFIMETLKAIKLDGVDVIGYTAW FT SLMDGFEWHRGYSIRRGLFYVDFLSQDKMLLPKSSALFYQKLIEKNGFPPLPENQPLEG FT TFPCDFAWGVVDNYIQVDTTLSQFTDLNVYLWDVHHSKRLIKVDGVVTKKRKSYCVDFA FT AIQPQIALLQEMHVTHFRFSLDWALILPLGNQSQVNHTILQYYRCMASELVRVNITPVV FT ALWQPMAPNQGLPRLLARQGAWENPYTALAFAEYARLCFQELGHHVKLWITMNEPYTRN FT MTYSAGHNLLKAHALAWHVYNEKFRHAQNGKISIALQADWIEPACPFSQKDKEVAERVL FT EFDIGWLAEPIFGSGDYPWVMRDWLNQRNNFLLPYFTEDEKKLIQGTFDFLALSHYTTI FT LVDSEKEDPIKYNDYLEVQEMTDITWLNSPSQVAVVPWGLRKVLNWLKFKYGDLPMYII FT SNGIDDGLHAEDDQLRVYYMQNYINEALKAHILDGINLCGYFAYSFNDRTAPRFGLYRY FT AADQFEPKASMKHYRKIIDSNGFPGPETLERFCPEEFTVCTECSFFHTRKSLLAFIAFL FT FFASIISLSLIFYYSKKGRRSYK" FT misc_feature 33623012 FT /note="Clone_right_end: RP11-218A18" FT polyA_signal 33640241..33640246 FT polyA_site 33640282 FT misc_feature 33674751 FT /note="Clone_left_end: RP11-81F11" FT misc_feature complement(33674951..33841179) FT /note="annotated region of clone" FT misc_feature complement(33836045..33836142) FT /note="Sequence from overlapping clone AL161898. Assembly FT confirmed by restriction digest" FT mRNA complement(join(33764078..33764221,33764966..33765020, FT AL627232.6:10909..11165,AL627232.6:20428..20694)) FT /locus_tag="RP11-81F11.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI792164.1 Em:BI042494.1" FT mRNA complement(join(33729573..33729753,33739474..33739555, FT 33741688..33741761,AL627232.6:20428..20665)) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-002" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: ESTs: Em:BM696449 Em:BM696449.1" FT mRNA complement(join(33712566..33713000,33716447..33716510, FT 33739474..33739555,33741688..33741759, FT AL627232.6:20428..20713)) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-004" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: cDNAs: Em:AY082592.1" FT /note="match: ESTs: Em:AW299902.1" FT CDS complement(join(33679730..33679847,33680895..33681071, FT 33684010..33684227,33684823..33685044,33685915..33686029, FT 33686858..33687068,33692202..33692400,33700218..33700377, FT 33701510..33701683,33703066..33704426,33716447..33716510, FT 33739474..33739555,33741688..33741759, FT AL627232.6:20428..20596)) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-006" FT /standard_name="OTTHUMP00000178559" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: proteins: Sw:Q9Y3M8.2" FT /protein_id="CAM23625.1" FT /translation="MFSQVPRTPASGCYYLNSMTPEGQEMYLRFDQTTRRSPYRMSRIL FT ARHQLVTKIQQEIEAKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVE FT PLCRRLNTLNKCASMKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLL FT PRGDRNGSPGGTGMRNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVM FT LDAPLVSSSLPQPPRDVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRT FT GGLVISGPMLQQEPESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSS FT SGVSTPCLKERKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPK FT DHKPGTFPKALSIESLSPTDSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSI FT YDNVPGSHLYASTGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTL FT VGEPGLSTFPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGA FT SLTRPNRRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSN FT KHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQ FT VGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSE FT TFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAV FT CLAPSLFHLNLLKKESSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLFEVP FT HELVAQSRNSYVEAEIHVPTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKFKGWVT FT CSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKVVET FT LDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVRAV FT VMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIAE FT GPETKI" FT mRNA complement(join(33677307..33679847,33680895..33681071, FT 33684010..33684227,33684823..33685044,33685915..33686029, FT 33686858..33687068,33692202..33692400,33700218..33700377, FT 33701510..33701683,33703066..33704426,33716447..33716510, FT 33739474..33739555,33741688..33741759, FT AL627232.6:20428..20713)) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-006" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: cDNAs: Em:AY082589.1" FT /note="match: ESTs: Em:AL520026.3 Em:AL703607.1 FT Em:BE275022.1 Em:BP231841.1 Em:BX390108.2 Em:DA334078.1 FT Em:DN914714.1 Em:DR004681.1" FT misc_feature complement(33794976) FT /note="Clone_left_end: RP11-270H22" FT mRNA complement(join(33677307..33679847,33680895..33681071, FT 33684010..33684227,33684823..33685044,33685915..33686029, FT 33686858..33687068,33692202..33692400,33700218..33700377, FT 33701510..33701683,33703066..33704426,33716447..33716510, FT 33739474..33739555,33741688..33741759,33779956..33780143)) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-001" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: ESTs: Em:BP233049.1 Em:DA799172.1" FT /note="match: cDNAs: Em:AL049801.1 Em:AY082591.1" FT mRNA complement(join(33677307..33679847,33680895..33681071, FT 33684010..33684227,33684823..33685044,33685915..33686029, FT 33686858..33687068,33692202..33692400,33700218..33700377, FT 33701510..33701683,33703066..33704426,33716447..33716510, FT 33739474..33739555,33741688..33741759,33760015..33760216)) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-003" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: ESTs: Em:BM479064.1" FT /note="match: cDNAs: Em:AY082590.1" FT CDS complement(join(33679730..33679847,33680895..33681071, FT 33684010..33684227,33684823..33685044,33685915..33686029, FT 33686858..33687068,33692202..33692400,33700218..33700377, FT 33701510..33701683,33703066..33704426,33716447..33716510, FT 33739474..33739555,33741688..33741759,33760015..33760159)) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-003" FT /standard_name="OTTHUMP00000178560" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /protein_id="CAM23626.1" FT /translation="MLEPSSVLHANVNQAPLWCLVLRWCRECKDTVCGGKQKSRVNHTF FT QRREIEAKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVEPLCRRLNT FT LNKCASMKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGS FT PGGTGMRNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSS FT SLPQPPRDVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGP FT MLQQEPESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCL FT KERKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFP FT KALSIESLSPTDSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSH FT LYASTGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTLVGEPGLST FT FPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGASLTRPNRR FT LRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSV FT PKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSG FT VKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQY FT VSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFH FT LNLLKKESSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSR FT NSYVEAEIHVPTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKFKGWVTCSSTDNTD FT LAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIY FT QYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLI FT EPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI" FT mRNA complement(join(33732724..33732915,33738287..33738546)) FT /locus_tag="RP11-81F11.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI823424 Em:AI862886" FT CDS complement(join(33679730..33679847,33680895..33681071, FT 33684010..33684227,33684823..33685044,33685915..33686029, FT 33686858..33687068,33692202..33692400,33700218..33700377, FT 33701510..33701683,33703066..33704426,33716447..33716479)) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-001" FT /standard_name="OTTHUMP00000205446" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: proteins: Sw:Q9Y3M8-3.2 Sw:Q9Y3M8.2" FT /protein_id="CAX15160.1" FT /translation="MKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLL FT PRGDRNGSPGGTGMRNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVM FT LDAPLVSSSLPQPPRDVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRT FT GGLVISGPMLQQEPESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSS FT SGVSTPCLKERKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPK FT DHKPGTFPKALSIESLSPTDSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSI FT YDNVPGSHLYASTGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTL FT VGEPGLSTFPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGA FT SLTRPNRRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSN FT KHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQ FT VGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSE FT TFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAV FT CLAPSLFHLNLLKKESSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLFEVP FT HELVAQSRNSYVEAEIHVPTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKFKGWVT FT CSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKVVET FT LDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVRAV FT VMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIAE FT GPETKI" FT mRNA join(33696713..33696920,33697405..33697797) FT /locus_tag="RP11-81F11.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BE151634.1" FT mRNA complement(join(33685921..33686029,33686858..33687330)) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-005" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: ESTs: Em:BI824865.1" FT polyA_signal complement(33677310..33677315) FT polyA_site complement(33677278) FT misc_feature complement(33674951) FT /note="Clone_left_end: RP11-81F11" FT misc_feature 33841180..33894708 FT /note="annotated region of clone" FT mRNA join(33851690..33851833,33853698..33853793, FT 33855166..33855471) FT /locus_tag="RP11-363P13.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA421537 Em:AI028287" FT mRNA join(complement(33859607..33859873), FT complement(33850088..33850344),AL139187.19:76160..76214, FT AL139187.19:76959..77102) FT /locus_tag="RP11-81F11.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI792164.1 Em:BI042494.1" FT mRNA join(complement(33859607..33859844), FT AL139187.19:99419..99492,AL139187.19:101625..101706, FT AL139187.19:111427..111607) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-002" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: ESTs: Em:BM696449 Em:BM696449.1" FT mRNA join(complement(33859607..33859892), FT AL139187.19:99421..99492,AL139187.19:101625..101706, FT AL139187.19:124670..124733,AL139187.19:128180..128614) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-004" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: cDNAs: Em:AY082592.1" FT /note="match: ESTs: Em:AW299902.1" FT CDS join(complement(33859607..33859775), FT AL139187.19:99421..99492,AL139187.19:101625..101706, FT AL139187.19:124670..124733,AL139187.19:136754..138114, FT AL139187.19:139497..139670,AL139187.19:140803..140962, FT AL139187.19:148780..148978,AL139187.19:154112..154322, FT AL139187.19:155151..155265,AL139187.19:156136..156357, FT AL139187.19:156953..157170,AL139187.19:160109..160285, FT AL139187.19:161333..161450) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-006" FT /standard_name="OTTHUMP00000178559" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: proteins: Sw:Q9Y3M8.2" FT /protein_id="CAM17900.1" FT /translation="MFSQVPRTPASGCYYLNSMTPEGQEMYLRFDQTTRRSPYRMSRIL FT ARHQLVTKIQQEIEAKEACDWLRAAGFPQYAQLYEDSQFPINIVAVKNDHDFLEKDLVE FT PLCRRLNTLNKCASMKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLL FT PRGDRNGSPGGTGMRNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVM FT LDAPLVSSSLPQPPRDVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRT FT GGLVISGPMLQQEPESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSS FT SGVSTPCLKERKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPK FT DHKPGTFPKALSIESLSPTDSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSI FT YDNVPGSHLYASTGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTL FT VGEPGLSTFPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGA FT SLTRPNRRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSN FT KHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQ FT VGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSE FT TFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAV FT CLAPSLFHLNLLKKESSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLFEVP FT HELVAQSRNSYVEAEIHVPTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKFKGWVT FT CSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKVVET FT LDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVRAV FT VMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIAE FT GPETKI" FT mRNA join(complement(33859607..33859892), FT AL139187.19:99421..99492,AL139187.19:101625..101706, FT AL139187.19:124670..124733,AL139187.19:136754..138114, FT AL139187.19:139497..139670,AL139187.19:140803..140962, FT AL139187.19:148780..148978,AL139187.19:154112..154322, FT AL139187.19:155151..155265,AL139187.19:156136..156357, FT AL139187.19:156953..157170,AL139187.19:160109..160285, FT AL139187.19:161333..163873) FT /gene="STARD13" FT /locus_tag="RP11-81F11.1-006" FT /product="StAR-related lipid transfer (START) domain FT containing 13" FT /note="match: cDNAs: Em:AY082589.1" FT /note="match: ESTs: Em:AL520026.3 Em:AL703607.1 FT Em:BE275022.1 Em:BP231841.1 Em:BX390108.2 Em:DA334078.1 FT Em:DN914714.1 Em:DR004681.1" FT misc_feature 33890709 FT /note="Clone_left_end: RP11-141M1" FT misc_feature 33894709..33944539 FT /note="annotated region of clone" FT mRNA join(33907983..33908186,33909142..33909403) FT /locus_tag="RP11-141M1.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI652393" FT mRNA complement(join(33929343..33929803,33933602..33933676, FT AL139383.14:13330..13377,AL139383.14:69389..69422, FT AL139383.14:153936..154070,AL139081.21:24619..24709)) FT /locus_tag="RP11-141M1.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BE616861.1" FT polyA_site complement(33922746) FT polyA_signal complement(33922769..33922774) FT mRNA complement(join(33922744..33923353,33924427..33924761)) FT /locus_tag="RP11-141M1.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BE293955.1 Em:BF308228.1" FT misc_feature 33942440 FT /note="Clone_left_end: RP11-87G1" FT misc_feature 33944540..34127356 FT /note="annotated region of clone" FT mRNA complement(join(AL138999.13:36635..37095, FT AL138999.13:40894..40968,33957769..33957816, FT 34013828..34013861,34098375..34098509, FT AL139081.21:24619..24709)) FT /locus_tag="RP11-141M1.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BE616861.1" FT misc_feature 34049308 FT /note="Clone_right_end: RP11-141M1" FT misc_feature 34066870 FT /note="Clone_left_end: RP11-37L2" FT mRNA complement(join(34085467..34085544,34094095..34094286, FT 34098375..34098459)) FT /locus_tag="RP11-141M1.3-003" FT /product="novel transcript" FT /note="match: ESTs: Em:AA923420" FT misc_feature 34127256 FT /note="Clone_right_end: RP11-87G1" FT misc_feature 34127357..34228196 FT /note="annotated region of clone" FT mRNA join(34185104..34185156,34185328..34185659) FT /locus_tag="RP11-37L2.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA833542.1" FT misc_feature 34224197 FT /note="Clone_left_end: RP11-179A7" FT misc_feature 34228197..34411798 FT /note="annotated region of clone" FT mRNA join(34231573..34231608,34232332..34232510, FT 34233899..34234065) FT /locus_tag="RP11-179A7.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AW663561" FT misc_feature 34250115 FT /note="Clone_right_end: RP11-37L2" FT mRNA complement(join(34228796..34228970,34230949..34231079, FT 34235414..34235480,34250815..34250861)) FT /locus_tag="RP11-141M1.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AI025338" FT mRNA complement(join(AL138999.13:36635..37095, FT AL138999.13:40894..40968,AL139383.14:13330..13377, FT AL139383.14:69389..69422,AL139383.14:153936..154070, FT 34250815..34250905)) FT /locus_tag="RP11-141M1.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BE616861.1" FT misc_feature 34352748 FT /note="Clone_left_end: RP11-142E9" FT mRNA join(34392186..34392402,34395269..34395406, FT 34398054..34398121,34399926..34400023,34403973..34404154, FT 34404856..34404992,34405393..34405491,34409285..34409354, FT 34410241..34411633) FT /gene="RFC3" FT /locus_tag="RP11-179A7.3-001" FT /product="replication factor C (activator 1) 3, 38kDa" FT /note="match: ESTs: Em:BM455343.1 Em:BU176632.1 FT Em:DA664611.1" FT /note="match: cDNAs: Em:AK222572.1 Em:BC000149.2 FT Em:BT019668.1 Em:CR598980.1 Em:L07541.1" FT CDS join(34392316..34392402,34395269..34395406, FT 34398054..34398121,34399926..34400023,34403973..34404154, FT 34404856..34404992,34405393..34405491,34409285..34409354, FT 34410241..34410432) FT /gene="RFC3" FT /locus_tag="RP11-179A7.3-001" FT /standard_name="OTTHUMP00000018237" FT /product="replication factor C (activator 1) 3, 38kDa" FT /note="match: proteins: Sw:P40938.2 Sw:Q2TBV1.1 Sw:Q8R323.1 FT Tr:Q3TKD1.1 Tr:Q4QQP4.1 Tr:Q4R5E8.1 Tr:Q53HK8.1 Tr:Q5M830.1 FT Tr:Q5U0C2.1 Tr:Q5W0E8.1 Tr:Q5ZJP0.1" FT /protein_id="CAH70947.1" FT /translation="MSLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSG FT AGKKTRIMCILRELYGVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSD FT RVVIQEMLKTVAQSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLIL FT CCNSTSKVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRN FT LRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYEL FT LTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFM FT ALYKKFMEDGLEGMMF" FT misc_feature 34409798 FT /note="Clone_right_end: RP11-179A7" FT polyA_signal 34411615..34411620 FT polyA_site 34411632 FT misc_feature 34534569 FT /note="Clone_left_end: RP11-218I21" FT misc_feature 34534769..34702741 FT /note="annotated region of clone" FT misc_feature 34553051 FT /note="Clone_right_end: RP11-142E9" FT CDS complement(34656566..34657447) FT /pseudo FT /locus_tag="RP11-218I21.1-001" FT /product="voltage dependent anion channel protein FT pseudogene" FT /note="match: proteins: Sw:P45880 Sw:P81004 Sw:P81155 FT Sw:P81155 Sw:Q9MZ15 Sw:Q9R1Z0 Sw:Q9Z2L0 Tr:Q90X82 FT Tr:Q94920" FT misc_feature 34702641 FT /note="Clone_right_end: RP11-218I21" FT misc_feature 34793562 FT /note="Clone_left_end: RP11-721F14" FT misc_feature 34863176 FT /note="Clone_right_end: RP11-282M24" FT misc_feature 34870846 FT /note="Clone_left_end: RP11-16D22" FT misc_feature 34871047..35036202 FT /note="annotated region of clone" FT misc_feature 34908919..34908943 FT /note="sequence from overlapping clone bA721F14 (AL356751). FT Assembly confirmed by restriction digest data" FT misc_feature 34969929 FT /note="Clone_right_end: RP11-717L20" FT misc_feature 34975506..34975848 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA complement(join(<35009587..35009781, FT AL161716.14:11413..11530,AL161716.14:117730..117810)) FT /locus_tag="RP11-16D22.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI201900 Em:AI972930" FT misc_feature 34991772..34991860 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 34997453 FT /note="Clone_left_end: RP11-269G10" FT misc_feature 35036101 FT /note="Clone_right_end: RP11-16D22" FT misc_feature 35036203..35097112 FT /note="annotated region of clone" FT misc_feature 35080268 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 30bp by restriction digest data" FT misc_feature 35096913 FT /note="Clone_left_end: RP11-266E6" FT misc_feature 35097113..35261357 FT /note="annotated region of clone" FT mRNA complement(join(35107983..35108332,35108425..35108487)) FT /locus_tag="RP11-16D22.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AA628169" FT misc_feature 35114816..35115023 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT CDS complement(35148341..35148803) FT /pseudo FT /locus_tag="RP11-266E6.2-001" FT /product="guanidinoacetate N-methyltransferase (GAMT) FT pseudogene" FT /note="match: proteins: Sw:O35969 Sw:P10868 Sw:Q14353 FT Sw:Q14353 Sw:Q14353" FT misc_feature 35164075 FT /note="Clone_right_end: RP11-269G10" FT misc_feature 35192839 FT /note="Clone_left_end: RP11-254D22" FT mRNA complement(join(AL138956.17:<138642..138836, FT 35108425..35108542,35214742..35214822)) FT /locus_tag="RP11-16D22.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI201900 Em:AI972930" FT misc_feature 35261257 FT /note="Clone_right_end: RP11-266E6" FT misc_feature 35359395 FT /note="Clone_left_end: RP11-307O13" FT misc_feature 35359596..35546088 FT /note="annotated region of clone" FT misc_feature 35372931 FT /note="Clone_right_end: RP11-254D22" FT misc_feature 35482631 FT /note="Tandem repeat. Forced join. Assembly is confirmed by FT restriction digest" FT mRNA join(35516456..35516500,35516797..35517251, FT AL161902.12:69081..69312,AL161902.12:73095..73195, FT AL161902.12:73454..73549,AL161902.12:76711..76832, FT AL161902.12:78417..78543,AL161902.12:84158..84277, FT AL161902.12:86865..87011,AL161902.12:98056..98253, FT AL161902.12:98867..99000,AL356430.19:21907..22015, FT AL356430.19:32900..33052,AL356430.19:34420..34588, FT AL356430.19:41024..41103,AL356430.19:41838..41900, FT AL356430.19:41987..42084,AL356430.19:47092..47184, FT AL356430.19:65879..65987,AL356430.19:79384..79465, FT AL356430.19:79693..79816,AL356430.19:80688..80880, FT AL356430.19:82626..83642,AL356430.19:85360..85577, FT AL356430.19:87966..88119,AL356430.19:94882..95062, FT AL356430.19:97074..97204,AL356430.19:100606..100713, FT AL356430.19:105970..106138,AL356430.19:107586..107681, FT AL356430.19:119474..119912,AL356430.19:132310..132464, FT AL356430.19:134663..134789,AL356430.19:156102..156229, FT AL357083.19:45114..45175,AL357083.19:64253..64317, FT AL357083.19:103833..103941,AL357083.19:106882..107048, FT AL161718.14:52938..53062,AL390071.9:14325..14468, FT AL390071.9:34633..34769,AL390071.9:112710..112827, FT AL390071.9:113163..113265,AL390071.9:117220..117335, FT AL390071.9:129138..129250,AL390071.9:146131..146271, FT AL390071.9:155561..155680,AL390071.9:168659..168811, FT AL139083.15:19322..19489,AL139083.15:37500..37589, FT AL139083.15:40896..41088,AL139083.15:43046..43117, FT AL139083.15:46096..46251,AL139083.15:46820..46990, FT AL139083.15:56326..56427,AL139083.15:58615..58811, FT AL139083.15:59609..59760,AL139083.15:62142..63977) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /product="neurobeachin" FT /note="match: cDNAs: Em:AB046764 Em:AF072371 Em:AF072372 FT Em:AF216648 Em:AF467287 Em:AF467288 Em:AK001059 Em:M83822 FT Em:Y18276 Em:Y18277" FT /note="match: ESTs: Em:AA460540 Em:AA633055 Em:AA668246 FT Em:AA775279 Em:AA986649 Em:AI004739 Em:AI117079 Em:AL649758 FT Em:AU118985 Em:AU170820 Em:AW632580 Em:AW961900 Em:BB253660 FT Em:BB301334 Em:BB542864 Em:BB561085 Em:BB597449 Em:BB640418 FT Em:BB648017 Em:BB861116 Em:BE010932 Em:BE080132 Em:BE534511 FT Em:BE534795 Em:BE571847 Em:BE701712 Em:BE813634 Em:BF141191 FT Em:BF226508 Em:BF328530 Em:BF328578 Em:BF328596 Em:BF328598 FT Em:BF328604 Em:BF328605 Em:BF328619 Em:BF402578 Em:BF467216 FT Em:BF673617 Em:BF675159 Em:BG246662 Em:BG654400 Em:BG655767 FT Em:BG666183 Em:BG800233 Em:BG818231 Em:BI033118 Em:BI033119 FT Em:BI033316 Em:BI342848 Em:BI656305 Em:BI688795 Em:BI988404 FT Em:BM314011 Em:BM546456 Em:BM564753 Em:BM827067 Em:BM925555 FT Em:BM933802 Em:BM939479 Em:BM942885 Em:BM946986 Em:BM982783 FT Em:BQ179118 Em:BQ179840 Em:BQ269526 Em:BQ443056 Em:BQ549977 FT Em:BQ554889 Em:H10235 Em:H15182 Em:R67302 Em:T06397 FT Em:T08985" FT CDS join(35516958..35517251,AL161902.12:69081..69312, FT AL161902.12:73095..73195,AL161902.12:73454..73549, FT AL161902.12:76711..76832,AL161902.12:78417..78543, FT AL161902.12:84158..84277,AL161902.12:86865..87011, FT AL161902.12:98056..98253,AL161902.12:98867..99000, FT AL356430.19:21907..22015,AL356430.19:32900..33052, FT AL356430.19:34420..34588,AL356430.19:41024..41103, FT AL356430.19:41838..41900,AL356430.19:41987..42084, FT AL356430.19:47092..47184,AL356430.19:65879..65987, FT AL356430.19:79384..79465,AL356430.19:79693..79816, FT AL356430.19:80688..80880,AL356430.19:82626..83642, FT AL356430.19:85360..85577,AL356430.19:87966..88119, FT AL356430.19:94882..95062,AL356430.19:97074..97204, FT AL356430.19:100606..100713,AL356430.19:105970..106138, FT AL356430.19:107586..107681,AL356430.19:119474..119912, FT AL356430.19:132310..132464,AL356430.19:134663..134789, FT AL356430.19:156102..156229,AL357083.19:45114..45175, FT AL357083.19:64253..64317,AL357083.19:103833..103941, FT AL357083.19:106882..107048,AL161718.14:52938..53062, FT AL390071.9:14325..14468,AL390071.9:34633..34769, FT AL390071.9:112710..112827,AL390071.9:113163..113265, FT AL390071.9:117220..117335,AL390071.9:129138..129250, FT AL390071.9:146131..146271,AL390071.9:155561..155680, FT AL390071.9:168659..168811,AL139083.15:19322..19489, FT AL139083.15:37500..37589,AL139083.15:40896..41088, FT AL139083.15:43046..43117,AL139083.15:46096..46251, FT AL139083.15:46820..46990,AL139083.15:56326..56427, FT AL139083.15:58615..58811,AL139083.15:59609..59760, FT AL139083.15:62142..62232) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /standard_name="OTTHUMP00000018239" FT /product="neurobeachin" FT /note="match: proteins: Sw:P50851 Sw:Q19317 Sw:Q8NFP9 FT Sw:Q8NFP9 Sw:Q8NFP9 Sw:Q9DDD5 Sw:Q9EPN1 Sw:Q9EPN1 Sw:Q9EPN1 FT Sw:Q9EPN1 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 FT Tr:O18116 Tr:Q9C6Q7 Tr:Q9ESD3 Tr:Q9ESD4 Tr:Q9ESE1" FT /protein_id="CAH72296.1" FT /translation="MASEKPGPGPGLEPQPVGLIAVGAAGGGGGGSGGGGTGGSGMGEL FT RGASGSGSVMLPAGMINPSVPIRNIRMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEF FT DLEMNFIIQDAESITCMTELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQV FT LLKMSAVDDMIADLLVDMLGVLASYSITVKELKLLFSMLRGESGIWPRHAVKLLSVLNQ FT MPQRHGPDTFFNFPGCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLY FT CFRTSKGVGYSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNS FT EIRCYVNGQLVSYGDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAVYVFSEALNP FT AQIFAIHQLGPGYKSTFKFKSESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCL FT ESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLNDS FT QVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLS FT FAKYLDGLSHGAPLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIR FT RVGTVLQLMHTLKYYYWVINPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILK FT DRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVIYKL FT LASKSESIWVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNT FT LYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSTPSAELMEVRRLFLSD FT MIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNSEEQKITEMVYNIFRILLYHAIKY FT EWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQEEENIKKGKKGNVSTISGLSS FT QTTGAKGGMEIREIEDLSQSQSPESETDYPVSTDTRDLLMSTKVSDDILGNSDRPGSGV FT HVEVHDLLVDIKAEKVEATEVKLDDMDLSPETLVGGENGALVEVESLLDNVYSAAVEKL FT QNNVHGSVGIIKKNEEKDNGPLITLADEKEDLPNSSTSFLFDKIPKQEEKLLPELSSNH FT IIPNIQDTQVHLGVSDDLGLLAHMTGSVDLTCTSSIIEEKEFKIHTTSDGMSSISERDL FT ASSTKGLEYAEMTATTLETESSSSKIVPNIDAGSIISDTERSDDGKESGKEIRKIQTTT FT TTQAVQGRSITQQDRDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRL FT LTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILP FT LLSAATSPTTELENIEVTQGMSAETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSS FT GGLMRQCLRLVCCVAVRNCLECRQRQRDRGNKSSHGSSKPQEVPQSVTATAASKTPLEN FT VPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDI FT LEPQRETTRTGSQPGRNIRQEINSPTSTVVVIPSIPHPSLNHGFLAKLIPEQSFGHSFY FT KETPAAFPDTIKEKETPTPGEDIQVESSIPHTDSGIGEEQVASILNGAELETSTGPDAM FT SELLSTLSSEVKKSQESLTENPSETLKPATSISSISQTKGINVKEILKSLVAAPVEIAE FT CGPEPIPYPDPALKRETQAILPMQFHSFDRSVVVPVKKPPPGSLAVTTVGATTAGSGLP FT TGSTSNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFVNGATSKNLPAVQTVAPMPED FT SAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSTSV FT VELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAE FT DVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAW FT GAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVKSKKT FT FRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLS FT ITTTEIYFEVDEDDSAFKKIDTKVLAYTEGLHGKWMFSEIRAVFSRRYLLQNTALEVFM FT ANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQ FT RREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGA FT LNPKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFD FT HPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDL FT PPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGS FT VNLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQ FT DVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLD FT QAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFR FT VYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGD FT NPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPE FT NCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTG FT GDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWH FT YEHQNRY" FT misc_feature 35540792 FT /note="Clone_left_end: RP11-66B8" FT misc_feature 35545988 FT /note="Clone_right_end: RP11-307O13" FT misc_feature 35546089..35651526 FT /note="annotated region of clone" FT mRNA complement(join(35621967..35622347,35623280..35623401)) FT /locus_tag="RP11-66B8.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL133945" FT mRNA join(35644089..35644242,35644856..35645102) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-002" FT /product="neurobeachin" FT /note="match: ESTs: Em:AW892811" FT misc_feature 35650429 FT /note="Clone_left_end: RP11-467B13" FT mRNA join(AL138690.19:156961..157005,AL138690.19:157302..157756, FT 35615070..35615301,35619084..35619184,35619443..35619538, FT 35622700..35622821,35624406..35624532,35630147..35630266, FT 35632854..35633000,35644045..35644242,35644856..35644989, FT AL356430.19:21907..22015,AL356430.19:32900..33052, FT AL356430.19:34420..34588,AL356430.19:41024..41103, FT AL356430.19:41838..41900,AL356430.19:41987..42084, FT AL356430.19:47092..47184,AL356430.19:65879..65987, FT AL356430.19:79384..79465,AL356430.19:79693..79816, FT AL356430.19:80688..80880,AL356430.19:82626..83642, FT AL356430.19:85360..85577,AL356430.19:87966..88119, FT AL356430.19:94882..95062,AL356430.19:97074..97204, FT AL356430.19:100606..100713,AL356430.19:105970..106138, FT AL356430.19:107586..107681,AL356430.19:119474..119912, FT AL356430.19:132310..132464,AL356430.19:134663..134789, FT AL356430.19:156102..156229,AL357083.19:45114..45175, FT AL357083.19:64253..64317,AL357083.19:103833..103941, FT AL357083.19:106882..107048,AL161718.14:52938..53062, FT AL390071.9:14325..14468,AL390071.9:34633..34769, FT AL390071.9:112710..112827,AL390071.9:113163..113265, FT AL390071.9:117220..117335,AL390071.9:129138..129250, FT AL390071.9:146131..146271,AL390071.9:155561..155680, FT AL390071.9:168659..168811,AL139083.15:19322..19489, FT AL139083.15:37500..37589,AL139083.15:40896..41088, FT AL139083.15:43046..43117,AL139083.15:46096..46251, FT AL139083.15:46820..46990,AL139083.15:56326..56427, FT AL139083.15:58615..58811,AL139083.15:59609..59760, FT AL139083.15:62142..63977) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /product="neurobeachin" FT /note="match: cDNAs: Em:AB046764 Em:AF072371 Em:AF072372 FT Em:AF216648 Em:AF467287 Em:AF467288 Em:AK001059 Em:M83822 FT Em:Y18276 Em:Y18277" FT /note="match: ESTs: Em:AA460540 Em:AA633055 Em:AA668246 FT Em:AA775279 Em:AA986649 Em:AI004739 Em:AI117079 Em:AL649758 FT Em:AU118985 Em:AU170820 Em:AW632580 Em:AW961900 Em:BB253660 FT Em:BB301334 Em:BB542864 Em:BB561085 Em:BB597449 Em:BB640418 FT Em:BB648017 Em:BB861116 Em:BE010932 Em:BE080132 Em:BE534511 FT Em:BE534795 Em:BE571847 Em:BE701712 Em:BE813634 Em:BF141191 FT Em:BF226508 Em:BF328530 Em:BF328578 Em:BF328596 Em:BF328598 FT Em:BF328604 Em:BF328605 Em:BF328619 Em:BF402578 Em:BF467216 FT Em:BF673617 Em:BF675159 Em:BG246662 Em:BG654400 Em:BG655767 FT Em:BG666183 Em:BG800233 Em:BG818231 Em:BI033118 Em:BI033119 FT Em:BI033316 Em:BI342848 Em:BI656305 Em:BI688795 Em:BI988404 FT Em:BM314011 Em:BM546456 Em:BM564753 Em:BM827067 Em:BM925555 FT Em:BM933802 Em:BM939479 Em:BM942885 Em:BM946986 Em:BM982783 FT Em:BQ179118 Em:BQ179840 Em:BQ269526 Em:BQ443056 Em:BQ549977 FT Em:BQ554889 Em:H10235 Em:H15182 Em:R67302 Em:T06397 FT Em:T08985" FT CDS join(AL138690.19:157463..157756,35615070..35615301, FT 35619084..35619184,35619443..35619538,35622700..35622821, FT 35624406..35624532,35630147..35630266,35632854..35633000, FT 35644045..35644242,35644856..35644989, FT AL356430.19:21907..22015,AL356430.19:32900..33052, FT AL356430.19:34420..34588,AL356430.19:41024..41103, FT AL356430.19:41838..41900,AL356430.19:41987..42084, FT AL356430.19:47092..47184,AL356430.19:65879..65987, FT AL356430.19:79384..79465,AL356430.19:79693..79816, FT AL356430.19:80688..80880,AL356430.19:82626..83642, FT AL356430.19:85360..85577,AL356430.19:87966..88119, FT AL356430.19:94882..95062,AL356430.19:97074..97204, FT AL356430.19:100606..100713,AL356430.19:105970..106138, FT AL356430.19:107586..107681,AL356430.19:119474..119912, FT AL356430.19:132310..132464,AL356430.19:134663..134789, FT AL356430.19:156102..156229,AL357083.19:45114..45175, FT AL357083.19:64253..64317,AL357083.19:103833..103941, FT AL357083.19:106882..107048,AL161718.14:52938..53062, FT AL390071.9:14325..14468,AL390071.9:34633..34769, FT AL390071.9:112710..112827,AL390071.9:113163..113265, FT AL390071.9:117220..117335,AL390071.9:129138..129250, FT AL390071.9:146131..146271,AL390071.9:155561..155680, FT AL390071.9:168659..168811,AL139083.15:19322..19489, FT AL139083.15:37500..37589,AL139083.15:40896..41088, FT AL139083.15:43046..43117,AL139083.15:46096..46251, FT AL139083.15:46820..46990,AL139083.15:56326..56427, FT AL139083.15:58615..58811,AL139083.15:59609..59760, FT AL139083.15:62142..62232) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /standard_name="OTTHUMP00000018239" FT /product="neurobeachin" FT /note="match: proteins: Sw:P50851 Sw:Q19317 Sw:Q8NFP9 FT Sw:Q8NFP9 Sw:Q8NFP9 Sw:Q9DDD5 Sw:Q9EPN1 Sw:Q9EPN1 Sw:Q9EPN1 FT Sw:Q9EPN1 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 FT Tr:O18116 Tr:Q9C6Q7 Tr:Q9ESD3 Tr:Q9ESD4 Tr:Q9ESE1" FT /protein_id="CAI16334.1" FT /translation="MASEKPGPGPGLEPQPVGLIAVGAAGGGGGGSGGGGTGGSGMGEL FT RGASGSGSVMLPAGMINPSVPIRNIRMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEF FT DLEMNFIIQDAESITCMTELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQV FT LLKMSAVDDMIADLLVDMLGVLASYSITVKELKLLFSMLRGESGIWPRHAVKLLSVLNQ FT MPQRHGPDTFFNFPGCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLY FT CFRTSKGVGYSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNS FT EIRCYVNGQLVSYGDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAVYVFSEALNP FT AQIFAIHQLGPGYKSTFKFKSESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCL FT ESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLNDS FT QVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLS FT FAKYLDGLSHGAPLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIR FT RVGTVLQLMHTLKYYYWVINPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILK FT DRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVIYKL FT LASKSESIWVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNT FT LYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSTPSAELMEVRRLFLSD FT MIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNSEEQKITEMVYNIFRILLYHAIKY FT EWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQEEENIKKGKKGNVSTISGLSS FT QTTGAKGGMEIREIEDLSQSQSPESETDYPVSTDTRDLLMSTKVSDDILGNSDRPGSGV FT HVEVHDLLVDIKAEKVEATEVKLDDMDLSPETLVGGENGALVEVESLLDNVYSAAVEKL FT QNNVHGSVGIIKKNEEKDNGPLITLADEKEDLPNSSTSFLFDKIPKQEEKLLPELSSNH FT IIPNIQDTQVHLGVSDDLGLLAHMTGSVDLTCTSSIIEEKEFKIHTTSDGMSSISERDL FT ASSTKGLEYAEMTATTLETESSSSKIVPNIDAGSIISDTERSDDGKESGKEIRKIQTTT FT TTQAVQGRSITQQDRDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRL FT LTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILP FT LLSAATSPTTELENIEVTQGMSAETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSS FT GGLMRQCLRLVCCVAVRNCLECRQRQRDRGNKSSHGSSKPQEVPQSVTATAASKTPLEN FT VPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDI FT LEPQRETTRTGSQPGRNIRQEINSPTSTVVVIPSIPHPSLNHGFLAKLIPEQSFGHSFY FT KETPAAFPDTIKEKETPTPGEDIQVESSIPHTDSGIGEEQVASILNGAELETSTGPDAM FT SELLSTLSSEVKKSQESLTENPSETLKPATSISSISQTKGINVKEILKSLVAAPVEIAE FT CGPEPIPYPDPALKRETQAILPMQFHSFDRSVVVPVKKPPPGSLAVTTVGATTAGSGLP FT TGSTSNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFVNGATSKNLPAVQTVAPMPED FT SAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSTSV FT VELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAE FT DVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAW FT GAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVKSKKT FT FRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLS FT ITTTEIYFEVDEDDSAFKKIDTKVLAYTEGLHGKWMFSEIRAVFSRRYLLQNTALEVFM FT ANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQ FT RREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGA FT LNPKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFD FT HPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDL FT PPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGS FT VNLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQ FT DVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLD FT QAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFR FT VYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGD FT NPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPE FT NCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTG FT GDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWH FT YEHQNRY" FT misc_feature 35651527..35821412 FT /note="annotated region of clone" FT misc_feature 35723207 FT /note="Clone_right_end: RP11-66B8" FT CDS join(35759431..35760156,35760483..35760816) FT /pseudo FT /locus_tag="RP11-467B13.2-001" FT /product="zinc finger protein 452 (ZNF452) pseudogene" FT /note="match: proteins: Sw:Q6R2W3" FT misc_feature 35799412 FT /note="Clone_left_end: RP11-562P17" FT mRNA join(AL138690.19:156961..157005,AL138690.19:157302..157756, FT AL161902.12:69081..69312,AL161902.12:73095..73195, FT AL161902.12:73454..73549,AL161902.12:76711..76832, FT AL161902.12:78417..78543,AL161902.12:84158..84277, FT AL161902.12:86865..87011,AL161902.12:98056..98253, FT AL161902.12:98867..99000,35672434..35672542, FT 35683427..35683579,35684947..35685115,35691551..35691630, FT 35692365..35692427,35692514..35692611,35697619..35697711, FT 35716406..35716514,35729911..35729992,35730220..35730343, FT 35731215..35731407,35733153..35734169,35735887..35736104, FT 35738493..35738646,35745409..35745589,35747601..35747731, FT 35751133..35751240,35756497..35756665,35758113..35758208, FT 35770001..35770439,35782837..35782991,35785190..35785316, FT 35806629..35806756,AL357083.19:45114..45175, FT AL357083.19:64253..64317,AL357083.19:103833..103941, FT AL357083.19:106882..107048,AL161718.14:52938..53062, FT AL390071.9:14325..14468,AL390071.9:34633..34769, FT AL390071.9:112710..112827,AL390071.9:113163..113265, FT AL390071.9:117220..117335,AL390071.9:129138..129250, FT AL390071.9:146131..146271,AL390071.9:155561..155680, FT AL390071.9:168659..168811,AL139083.15:19322..19489, FT AL139083.15:37500..37589,AL139083.15:40896..41088, FT AL139083.15:43046..43117,AL139083.15:46096..46251, FT AL139083.15:46820..46990,AL139083.15:56326..56427, FT AL139083.15:58615..58811,AL139083.15:59609..59760, FT AL139083.15:62142..63977) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /product="neurobeachin" FT /note="match: cDNAs: Em:AB046764 Em:AF072371 Em:AF072372 FT Em:AF216648 Em:AF467287 Em:AF467288 Em:AK001059 Em:M83822 FT Em:Y18276 Em:Y18277" FT /note="match: ESTs: Em:AA460540 Em:AA633055 Em:AA668246 FT Em:AA775279 Em:AA986649 Em:AI004739 Em:AI117079 Em:AL649758 FT Em:AU118985 Em:AU170820 Em:AW632580 Em:AW961900 Em:BB253660 FT Em:BB301334 Em:BB542864 Em:BB561085 Em:BB597449 Em:BB640418 FT Em:BB648017 Em:BB861116 Em:BE010932 Em:BE080132 Em:BE534511 FT Em:BE534795 Em:BE571847 Em:BE701712 Em:BE813634 Em:BF141191 FT Em:BF226508 Em:BF328530 Em:BF328578 Em:BF328596 Em:BF328598 FT Em:BF328604 Em:BF328605 Em:BF328619 Em:BF402578 Em:BF467216 FT Em:BF673617 Em:BF675159 Em:BG246662 Em:BG654400 Em:BG655767 FT Em:BG666183 Em:BG800233 Em:BG818231 Em:BI033118 Em:BI033119 FT Em:BI033316 Em:BI342848 Em:BI656305 Em:BI688795 Em:BI988404 FT Em:BM314011 Em:BM546456 Em:BM564753 Em:BM827067 Em:BM925555 FT Em:BM933802 Em:BM939479 Em:BM942885 Em:BM946986 Em:BM982783 FT Em:BQ179118 Em:BQ179840 Em:BQ269526 Em:BQ443056 Em:BQ549977 FT Em:BQ554889 Em:H10235 Em:H15182 Em:R67302 Em:T06397 FT Em:T08985" FT CDS join(AL138690.19:157463..157756,AL161902.12:69081..69312, FT AL161902.12:73095..73195,AL161902.12:73454..73549, FT AL161902.12:76711..76832,AL161902.12:78417..78543, FT AL161902.12:84158..84277,AL161902.12:86865..87011, FT AL161902.12:98056..98253,AL161902.12:98867..99000, FT 35672434..35672542,35683427..35683579,35684947..35685115, FT 35691551..35691630,35692365..35692427,35692514..35692611, FT 35697619..35697711,35716406..35716514,35729911..35729992, FT 35730220..35730343,35731215..35731407,35733153..35734169, FT 35735887..35736104,35738493..35738646,35745409..35745589, FT 35747601..35747731,35751133..35751240,35756497..35756665, FT 35758113..35758208,35770001..35770439,35782837..35782991, FT 35785190..35785316,35806629..35806756, FT AL357083.19:45114..45175,AL357083.19:64253..64317, FT AL357083.19:103833..103941,AL357083.19:106882..107048, FT AL161718.14:52938..53062,AL390071.9:14325..14468, FT AL390071.9:34633..34769,AL390071.9:112710..112827, FT AL390071.9:113163..113265,AL390071.9:117220..117335, FT AL390071.9:129138..129250,AL390071.9:146131..146271, FT AL390071.9:155561..155680,AL390071.9:168659..168811, FT AL139083.15:19322..19489,AL139083.15:37500..37589, FT AL139083.15:40896..41088,AL139083.15:43046..43117, FT AL139083.15:46096..46251,AL139083.15:46820..46990, FT AL139083.15:56326..56427,AL139083.15:58615..58811, FT AL139083.15:59609..59760,AL139083.15:62142..62232) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /standard_name="OTTHUMP00000018239" FT /product="neurobeachin" FT /note="match: proteins: Sw:P50851 Sw:Q19317 Sw:Q8NFP9 FT Sw:Q8NFP9 Sw:Q8NFP9 Sw:Q9DDD5 Sw:Q9EPN1 Sw:Q9EPN1 Sw:Q9EPN1 FT Sw:Q9EPN1 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 FT Tr:O18116 Tr:Q9C6Q7 Tr:Q9ESD3 Tr:Q9ESD4 Tr:Q9ESE1" FT /protein_id="CAH74071.1" FT /translation="MASEKPGPGPGLEPQPVGLIAVGAAGGGGGGSGGGGTGGSGMGEL FT RGASGSGSVMLPAGMINPSVPIRNIRMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEF FT DLEMNFIIQDAESITCMTELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQV FT LLKMSAVDDMIADLLVDMLGVLASYSITVKELKLLFSMLRGESGIWPRHAVKLLSVLNQ FT MPQRHGPDTFFNFPGCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLY FT CFRTSKGVGYSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNS FT EIRCYVNGQLVSYGDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAVYVFSEALNP FT AQIFAIHQLGPGYKSTFKFKSESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCL FT ESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLNDS FT QVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLS FT FAKYLDGLSHGAPLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIR FT RVGTVLQLMHTLKYYYWVINPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILK FT DRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVIYKL FT LASKSESIWVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNT FT LYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSTPSAELMEVRRLFLSD FT MIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNSEEQKITEMVYNIFRILLYHAIKY FT EWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQEEENIKKGKKGNVSTISGLSS FT QTTGAKGGMEIREIEDLSQSQSPESETDYPVSTDTRDLLMSTKVSDDILGNSDRPGSGV FT HVEVHDLLVDIKAEKVEATEVKLDDMDLSPETLVGGENGALVEVESLLDNVYSAAVEKL FT QNNVHGSVGIIKKNEEKDNGPLITLADEKEDLPNSSTSFLFDKIPKQEEKLLPELSSNH FT IIPNIQDTQVHLGVSDDLGLLAHMTGSVDLTCTSSIIEEKEFKIHTTSDGMSSISERDL FT ASSTKGLEYAEMTATTLETESSSSKIVPNIDAGSIISDTERSDDGKESGKEIRKIQTTT FT TTQAVQGRSITQQDRDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRL FT LTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILP FT LLSAATSPTTELENIEVTQGMSAETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSS FT GGLMRQCLRLVCCVAVRNCLECRQRQRDRGNKSSHGSSKPQEVPQSVTATAASKTPLEN FT VPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDI FT LEPQRETTRTGSQPGRNIRQEINSPTSTVVVIPSIPHPSLNHGFLAKLIPEQSFGHSFY FT KETPAAFPDTIKEKETPTPGEDIQVESSIPHTDSGIGEEQVASILNGAELETSTGPDAM FT SELLSTLSSEVKKSQESLTENPSETLKPATSISSISQTKGINVKEILKSLVAAPVEIAE FT CGPEPIPYPDPALKRETQAILPMQFHSFDRSVVVPVKKPPPGSLAVTTVGATTAGSGLP FT TGSTSNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFVNGATSKNLPAVQTVAPMPED FT SAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSTSV FT VELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAE FT DVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAW FT GAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVKSKKT FT FRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLS FT ITTTEIYFEVDEDDSAFKKIDTKVLAYTEGLHGKWMFSEIRAVFSRRYLLQNTALEVFM FT ANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQ FT RREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGA FT LNPKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFD FT HPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDL FT PPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGS FT VNLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQ FT DVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLD FT QAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFR FT VYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGD FT NPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPE FT NCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTG FT GDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWH FT YEHQNRY" FT misc_feature 35816742..35817046 FT /note="Sequence from overlapping clone bA562P17 FT (AL357083).Assembly confirmed by restriction digest" FT misc_feature 35820413 FT /note="Clone_right_end: RP11-467B13" FT misc_feature 35821413..35953568 FT /note="annotated region of clone" FT CDS 35825207..35825966 FT /pseudo FT /locus_tag="RP11-562P17.2-001" FT /product="prohibitin (PHB) pseudogene" FT /note="match: proteins: Sw:O35129 Sw:O35129 Sw:P24156 FT Sw:P24156 Sw:P35232 Sw:P35232 Sw:P40961 Sw:P50085 Sw:P67779 FT Sw:Q99623 Sw:Q9BKU4 Tr:O01720 Tr:O04331 Tr:O04361 Tr:O13357 FT Tr:O49460 Tr:O94550 Tr:P67778 Tr:P67778 Tr:Q96CH8 Tr:Q9BSE8 FT Tr:Q9FFH5 Tr:Q9LK25 Tr:Q9M586 Tr:Q9M587 Tr:Q9M588 Tr:Q9M589 FT Tr:Q9P7H3 Tr:Q9SIL6 Tr:Q9ZNT7" FT polyA_signal 35826098..35826103 FT misc_feature 35866828 FT /note="Clone_left_end: RP11-29G24" FT misc_feature 35889690..35889699 FT /note="Sequence from overlapping clone RP11-29G24 FT (AL161718). Assembly confirmed by restriction digest" FT misc_feature 35951568 FT /note="Clone_right_end: RP11-562P17" FT mRNA join(AL138690.19:156961..157005,AL138690.19:157302..157756, FT AL161902.12:69081..69312,AL161902.12:73095..73195, FT AL161902.12:73454..73549,AL161902.12:76711..76832, FT AL161902.12:78417..78543,AL161902.12:84158..84277, FT AL161902.12:86865..87011,AL161902.12:98056..98253, FT AL161902.12:98867..99000,AL356430.19:21907..22015, FT AL356430.19:32900..33052,AL356430.19:34420..34588, FT AL356430.19:41024..41103,AL356430.19:41838..41900, FT AL356430.19:41987..42084,AL356430.19:47092..47184, FT AL356430.19:65879..65987,AL356430.19:79384..79465, FT AL356430.19:79693..79816,AL356430.19:80688..80880, FT AL356430.19:82626..83642,AL356430.19:85360..85577, FT AL356430.19:87966..88119,AL356430.19:94882..95062, FT AL356430.19:97074..97204,AL356430.19:100606..100713, FT AL356430.19:105970..106138,AL356430.19:107586..107681, FT AL356430.19:119474..119912,AL356430.19:132310..132464, FT AL356430.19:134663..134789,AL356430.19:156102..156229, FT 35864526..35864587,35883665..35883729,35923245..35923353, FT 35926294..35926460,AL161718.14:52938..53062, FT AL390071.9:14325..14468,AL390071.9:34633..34769, FT AL390071.9:112710..112827,AL390071.9:113163..113265, FT AL390071.9:117220..117335,AL390071.9:129138..129250, FT AL390071.9:146131..146271,AL390071.9:155561..155680, FT AL390071.9:168659..168811,AL139083.15:19322..19489, FT AL139083.15:37500..37589,AL139083.15:40896..41088, FT AL139083.15:43046..43117,AL139083.15:46096..46251, FT AL139083.15:46820..46990,AL139083.15:56326..56427, FT AL139083.15:58615..58811,AL139083.15:59609..59760, FT AL139083.15:62142..63977) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /product="neurobeachin" FT /note="match: cDNAs: Em:AB046764 Em:AF072371 Em:AF072372 FT Em:AF216648 Em:AF467287 Em:AF467288 Em:AK001059 Em:M83822 FT Em:Y18276 Em:Y18277" FT /note="match: ESTs: Em:AA460540 Em:AA633055 Em:AA668246 FT Em:AA775279 Em:AA986649 Em:AI004739 Em:AI117079 Em:AL649758 FT Em:AU118985 Em:AU170820 Em:AW632580 Em:AW961900 Em:BB253660 FT Em:BB301334 Em:BB542864 Em:BB561085 Em:BB597449 Em:BB640418 FT Em:BB648017 Em:BB861116 Em:BE010932 Em:BE080132 Em:BE534511 FT Em:BE534795 Em:BE571847 Em:BE701712 Em:BE813634 Em:BF141191 FT Em:BF226508 Em:BF328530 Em:BF328578 Em:BF328596 Em:BF328598 FT Em:BF328604 Em:BF328605 Em:BF328619 Em:BF402578 Em:BF467216 FT Em:BF673617 Em:BF675159 Em:BG246662 Em:BG654400 Em:BG655767 FT Em:BG666183 Em:BG800233 Em:BG818231 Em:BI033118 Em:BI033119 FT Em:BI033316 Em:BI342848 Em:BI656305 Em:BI688795 Em:BI988404 FT Em:BM314011 Em:BM546456 Em:BM564753 Em:BM827067 Em:BM925555 FT Em:BM933802 Em:BM939479 Em:BM942885 Em:BM946986 Em:BM982783 FT Em:BQ179118 Em:BQ179840 Em:BQ269526 Em:BQ443056 Em:BQ549977 FT Em:BQ554889 Em:H10235 Em:H15182 Em:R67302 Em:T06397 FT Em:T08985" FT CDS join(AL138690.19:157463..157756,AL161902.12:69081..69312, FT AL161902.12:73095..73195,AL161902.12:73454..73549, FT AL161902.12:76711..76832,AL161902.12:78417..78543, FT AL161902.12:84158..84277,AL161902.12:86865..87011, FT AL161902.12:98056..98253,AL161902.12:98867..99000, FT AL356430.19:21907..22015,AL356430.19:32900..33052, FT AL356430.19:34420..34588,AL356430.19:41024..41103, FT AL356430.19:41838..41900,AL356430.19:41987..42084, FT AL356430.19:47092..47184,AL356430.19:65879..65987, FT AL356430.19:79384..79465,AL356430.19:79693..79816, FT AL356430.19:80688..80880,AL356430.19:82626..83642, FT AL356430.19:85360..85577,AL356430.19:87966..88119, FT AL356430.19:94882..95062,AL356430.19:97074..97204, FT AL356430.19:100606..100713,AL356430.19:105970..106138, FT AL356430.19:107586..107681,AL356430.19:119474..119912, FT AL356430.19:132310..132464,AL356430.19:134663..134789, FT AL356430.19:156102..156229,35864526..35864587, FT 35883665..35883729,35923245..35923353,35926294..35926460, FT AL161718.14:52938..53062,AL390071.9:14325..14468, FT AL390071.9:34633..34769,AL390071.9:112710..112827, FT AL390071.9:113163..113265,AL390071.9:117220..117335, FT AL390071.9:129138..129250,AL390071.9:146131..146271, FT AL390071.9:155561..155680,AL390071.9:168659..168811, FT AL139083.15:19322..19489,AL139083.15:37500..37589, FT AL139083.15:40896..41088,AL139083.15:43046..43117, FT AL139083.15:46096..46251,AL139083.15:46820..46990, FT AL139083.15:56326..56427,AL139083.15:58615..58811, FT AL139083.15:59609..59760,AL139083.15:62142..62232) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /standard_name="OTTHUMP00000018239" FT /product="neurobeachin" FT /note="match: proteins: Sw:P50851 Sw:Q19317 Sw:Q8NFP9 FT Sw:Q8NFP9 Sw:Q8NFP9 Sw:Q9DDD5 Sw:Q9EPN1 Sw:Q9EPN1 Sw:Q9EPN1 FT Sw:Q9EPN1 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 FT Tr:O18116 Tr:Q9C6Q7 Tr:Q9ESD3 Tr:Q9ESD4 Tr:Q9ESE1" FT /protein_id="CAI15737.1" FT /translation="MASEKPGPGPGLEPQPVGLIAVGAAGGGGGGSGGGGTGGSGMGEL FT RGASGSGSVMLPAGMINPSVPIRNIRMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEF FT DLEMNFIIQDAESITCMTELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQV FT LLKMSAVDDMIADLLVDMLGVLASYSITVKELKLLFSMLRGESGIWPRHAVKLLSVLNQ FT MPQRHGPDTFFNFPGCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLY FT CFRTSKGVGYSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNS FT EIRCYVNGQLVSYGDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAVYVFSEALNP FT AQIFAIHQLGPGYKSTFKFKSESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCL FT ESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLNDS FT QVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLS FT FAKYLDGLSHGAPLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIR FT RVGTVLQLMHTLKYYYWVINPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILK FT DRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVIYKL FT LASKSESIWVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNT FT LYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSTPSAELMEVRRLFLSD FT MIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNSEEQKITEMVYNIFRILLYHAIKY FT EWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQEEENIKKGKKGNVSTISGLSS FT QTTGAKGGMEIREIEDLSQSQSPESETDYPVSTDTRDLLMSTKVSDDILGNSDRPGSGV FT HVEVHDLLVDIKAEKVEATEVKLDDMDLSPETLVGGENGALVEVESLLDNVYSAAVEKL FT QNNVHGSVGIIKKNEEKDNGPLITLADEKEDLPNSSTSFLFDKIPKQEEKLLPELSSNH FT IIPNIQDTQVHLGVSDDLGLLAHMTGSVDLTCTSSIIEEKEFKIHTTSDGMSSISERDL FT ASSTKGLEYAEMTATTLETESSSSKIVPNIDAGSIISDTERSDDGKESGKEIRKIQTTT FT TTQAVQGRSITQQDRDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRL FT LTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILP FT LLSAATSPTTELENIEVTQGMSAETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSS FT GGLMRQCLRLVCCVAVRNCLECRQRQRDRGNKSSHGSSKPQEVPQSVTATAASKTPLEN FT VPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDI FT LEPQRETTRTGSQPGRNIRQEINSPTSTVVVIPSIPHPSLNHGFLAKLIPEQSFGHSFY FT KETPAAFPDTIKEKETPTPGEDIQVESSIPHTDSGIGEEQVASILNGAELETSTGPDAM FT SELLSTLSSEVKKSQESLTENPSETLKPATSISSISQTKGINVKEILKSLVAAPVEIAE FT CGPEPIPYPDPALKRETQAILPMQFHSFDRSVVVPVKKPPPGSLAVTTVGATTAGSGLP FT TGSTSNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFVNGATSKNLPAVQTVAPMPED FT SAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSTSV FT VELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAE FT DVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAW FT GAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVKSKKT FT FRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLS FT ITTTEIYFEVDEDDSAFKKIDTKVLAYTEGLHGKWMFSEIRAVFSRRYLLQNTALEVFM FT ANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQ FT RREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGA FT LNPKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFD FT HPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDL FT PPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGS FT VNLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQ FT DVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLD FT QAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFR FT VYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGD FT NPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPE FT NCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTG FT GDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWH FT YEHQNRY" FT misc_feature 35953569..36012004 FT /note="annotated region of clone" FT misc_feature 36011805 FT /note="Clone_left_end: RP11-98D3" FT mRNA join(AL138690.19:156961..157005,AL138690.19:157302..157756, FT AL161902.12:69081..69312,AL161902.12:73095..73195, FT AL161902.12:73454..73549,AL161902.12:76711..76832, FT AL161902.12:78417..78543,AL161902.12:84158..84277, FT AL161902.12:86865..87011,AL161902.12:98056..98253, FT AL161902.12:98867..99000,AL356430.19:21907..22015, FT AL356430.19:32900..33052,AL356430.19:34420..34588, FT AL356430.19:41024..41103,AL356430.19:41838..41900, FT AL356430.19:41987..42084,AL356430.19:47092..47184, FT AL356430.19:65879..65987,AL356430.19:79384..79465, FT AL356430.19:79693..79816,AL356430.19:80688..80880, FT AL356430.19:82626..83642,AL356430.19:85360..85577, FT AL356430.19:87966..88119,AL356430.19:94882..95062, FT AL356430.19:97074..97204,AL356430.19:100606..100713, FT AL356430.19:105970..106138,AL356430.19:107586..107681, FT AL356430.19:119474..119912,AL356430.19:132310..132464, FT AL356430.19:134663..134789,AL356430.19:156102..156229, FT AL357083.19:45114..45175,AL357083.19:64253..64317, FT AL357083.19:103833..103941,AL357083.19:106882..107048, FT 36006406..36006530,AL390071.9:14325..14468, FT AL390071.9:34633..34769,AL390071.9:112710..112827, FT AL390071.9:113163..113265,AL390071.9:117220..117335, FT AL390071.9:129138..129250,AL390071.9:146131..146271, FT AL390071.9:155561..155680,AL390071.9:168659..168811, FT AL139083.15:19322..19489,AL139083.15:37500..37589, FT AL139083.15:40896..41088,AL139083.15:43046..43117, FT AL139083.15:46096..46251,AL139083.15:46820..46990, FT AL139083.15:56326..56427,AL139083.15:58615..58811, FT AL139083.15:59609..59760,AL139083.15:62142..63977) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /product="neurobeachin" FT /note="match: cDNAs: Em:AB046764 Em:AF072371 Em:AF072372 FT Em:AF216648 Em:AF467287 Em:AF467288 Em:AK001059 Em:M83822 FT Em:Y18276 Em:Y18277" FT /note="match: ESTs: Em:AA460540 Em:AA633055 Em:AA668246 FT Em:AA775279 Em:AA986649 Em:AI004739 Em:AI117079 Em:AL649758 FT Em:AU118985 Em:AU170820 Em:AW632580 Em:AW961900 Em:BB253660 FT Em:BB301334 Em:BB542864 Em:BB561085 Em:BB597449 Em:BB640418 FT Em:BB648017 Em:BB861116 Em:BE010932 Em:BE080132 Em:BE534511 FT Em:BE534795 Em:BE571847 Em:BE701712 Em:BE813634 Em:BF141191 FT Em:BF226508 Em:BF328530 Em:BF328578 Em:BF328596 Em:BF328598 FT Em:BF328604 Em:BF328605 Em:BF328619 Em:BF402578 Em:BF467216 FT Em:BF673617 Em:BF675159 Em:BG246662 Em:BG654400 Em:BG655767 FT Em:BG666183 Em:BG800233 Em:BG818231 Em:BI033118 Em:BI033119 FT Em:BI033316 Em:BI342848 Em:BI656305 Em:BI688795 Em:BI988404 FT Em:BM314011 Em:BM546456 Em:BM564753 Em:BM827067 Em:BM925555 FT Em:BM933802 Em:BM939479 Em:BM942885 Em:BM946986 Em:BM982783 FT Em:BQ179118 Em:BQ179840 Em:BQ269526 Em:BQ443056 Em:BQ549977 FT Em:BQ554889 Em:H10235 Em:H15182 Em:R67302 Em:T06397 FT Em:T08985" FT CDS join(AL138690.19:157463..157756,AL161902.12:69081..69312, FT AL161902.12:73095..73195,AL161902.12:73454..73549, FT AL161902.12:76711..76832,AL161902.12:78417..78543, FT AL161902.12:84158..84277,AL161902.12:86865..87011, FT AL161902.12:98056..98253,AL161902.12:98867..99000, FT AL356430.19:21907..22015,AL356430.19:32900..33052, FT AL356430.19:34420..34588,AL356430.19:41024..41103, FT AL356430.19:41838..41900,AL356430.19:41987..42084, FT AL356430.19:47092..47184,AL356430.19:65879..65987, FT AL356430.19:79384..79465,AL356430.19:79693..79816, FT AL356430.19:80688..80880,AL356430.19:82626..83642, FT AL356430.19:85360..85577,AL356430.19:87966..88119, FT AL356430.19:94882..95062,AL356430.19:97074..97204, FT AL356430.19:100606..100713,AL356430.19:105970..106138, FT AL356430.19:107586..107681,AL356430.19:119474..119912, FT AL356430.19:132310..132464,AL356430.19:134663..134789, FT AL356430.19:156102..156229,AL357083.19:45114..45175, FT AL357083.19:64253..64317,AL357083.19:103833..103941, FT AL357083.19:106882..107048,36006406..36006530, FT AL390071.9:14325..14468,AL390071.9:34633..34769, FT AL390071.9:112710..112827,AL390071.9:113163..113265, FT AL390071.9:117220..117335,AL390071.9:129138..129250, FT AL390071.9:146131..146271,AL390071.9:155561..155680, FT AL390071.9:168659..168811,AL139083.15:19322..19489, FT AL139083.15:37500..37589,AL139083.15:40896..41088, FT AL139083.15:43046..43117,AL139083.15:46096..46251, FT AL139083.15:46820..46990,AL139083.15:56326..56427, FT AL139083.15:58615..58811,AL139083.15:59609..59760, FT AL139083.15:62142..62232) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /standard_name="OTTHUMP00000018239" FT /product="neurobeachin" FT /note="match: proteins: Sw:P50851 Sw:Q19317 Sw:Q8NFP9 FT Sw:Q8NFP9 Sw:Q8NFP9 Sw:Q9DDD5 Sw:Q9EPN1 Sw:Q9EPN1 Sw:Q9EPN1 FT Sw:Q9EPN1 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 FT Tr:O18116 Tr:Q9C6Q7 Tr:Q9ESD3 Tr:Q9ESD4 Tr:Q9ESE1" FT /protein_id="CAH72182.1" FT /translation="MASEKPGPGPGLEPQPVGLIAVGAAGGGGGGSGGGGTGGSGMGEL FT RGASGSGSVMLPAGMINPSVPIRNIRMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEF FT DLEMNFIIQDAESITCMTELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQV FT LLKMSAVDDMIADLLVDMLGVLASYSITVKELKLLFSMLRGESGIWPRHAVKLLSVLNQ FT MPQRHGPDTFFNFPGCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLY FT CFRTSKGVGYSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNS FT EIRCYVNGQLVSYGDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAVYVFSEALNP FT AQIFAIHQLGPGYKSTFKFKSESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCL FT ESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLNDS FT QVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLS FT FAKYLDGLSHGAPLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIR FT RVGTVLQLMHTLKYYYWVINPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILK FT DRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVIYKL FT LASKSESIWVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNT FT LYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSTPSAELMEVRRLFLSD FT MIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNSEEQKITEMVYNIFRILLYHAIKY FT EWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQEEENIKKGKKGNVSTISGLSS FT QTTGAKGGMEIREIEDLSQSQSPESETDYPVSTDTRDLLMSTKVSDDILGNSDRPGSGV FT HVEVHDLLVDIKAEKVEATEVKLDDMDLSPETLVGGENGALVEVESLLDNVYSAAVEKL FT QNNVHGSVGIIKKNEEKDNGPLITLADEKEDLPNSSTSFLFDKIPKQEEKLLPELSSNH FT IIPNIQDTQVHLGVSDDLGLLAHMTGSVDLTCTSSIIEEKEFKIHTTSDGMSSISERDL FT ASSTKGLEYAEMTATTLETESSSSKIVPNIDAGSIISDTERSDDGKESGKEIRKIQTTT FT TTQAVQGRSITQQDRDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRL FT LTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILP FT LLSAATSPTTELENIEVTQGMSAETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSS FT GGLMRQCLRLVCCVAVRNCLECRQRQRDRGNKSSHGSSKPQEVPQSVTATAASKTPLEN FT VPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDI FT LEPQRETTRTGSQPGRNIRQEINSPTSTVVVIPSIPHPSLNHGFLAKLIPEQSFGHSFY FT KETPAAFPDTIKEKETPTPGEDIQVESSIPHTDSGIGEEQVASILNGAELETSTGPDAM FT SELLSTLSSEVKKSQESLTENPSETLKPATSISSISQTKGINVKEILKSLVAAPVEIAE FT CGPEPIPYPDPALKRETQAILPMQFHSFDRSVVVPVKKPPPGSLAVTTVGATTAGSGLP FT TGSTSNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFVNGATSKNLPAVQTVAPMPED FT SAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSTSV FT VELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAE FT DVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAW FT GAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVKSKKT FT FRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLS FT ITTTEIYFEVDEDDSAFKKIDTKVLAYTEGLHGKWMFSEIRAVFSRRYLLQNTALEVFM FT ANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQ FT RREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGA FT LNPKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFD FT HPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDL FT PPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGS FT VNLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQ FT DVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLD FT QAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFR FT VYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGD FT NPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPE FT NCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTG FT GDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWH FT YEHQNRY" FT misc_feature 36012005..36182902 FT /note="annotated region of clone" FT misc_feature 36045617 FT /note="Clone_right_end: RP11-29G24" FT polyA_site complement(36048319) FT polyA_signal complement(36048341..36048346) FT polyA_signal complement(36048346..36048351) FT polyA_signal complement(36048355..36048360) FT mRNA complement(36048404..36051346) FT /gene="MAB21L1" FT /locus_tag="RP11-98D3.1-001" FT /product="mab-21-like 1 (C. elegans)" FT /note="match: ESTs: Em:AW950224.1 Em:BM713194.1 FT Em:BM720613.1 Em:BX432951.1 Em:CV030439.1" FT /note="match: cDNAs: Em:AB073388.1 Em:CR624056.1 FT Em:U38810.1" FT CDS complement(36049196..36050275) FT /gene="MAB21L1" FT /locus_tag="RP11-98D3.1-001" FT /standard_name="OTTHUMP00000018238" FT /product="mab-21-like 1 (C. elegans)" FT /note="match: proteins: Tr:O70299.1 Tr:Q13394.1 Tr:Q4RRG7.1 FT Tr:Q6GQD9.1 Tr:Q6I9T5.1 Tr:Q6NYB4.1 Tr:Q8AY65.1 FT Tr:Q8JIW4.1" FT /protein_id="CAI17181.1" FT /translation="MIAAQAKLVYHLNKYYNEKCQARKAAIAKTIREVCKVVSDVLKEV FT EVQEPRFISSLNEMDNRYEGLEVISPTEFEVVLYLNQMGVFNFVDDGSLPGCAVLKLSD FT GRKRSMSLWVEFITASGYLSARKIRSRFQTLVAQAVDKCSYRDVVKMVADTSEVKLRIR FT DRYVVQITPAFKCTGIWPRSAAHWPLPHIPWPGPNRVAEVKAEGFNLLSKECHSLAGKQ FT SSAESDAWVLQFAEAENRLQMGGCRKKCLSILKTLRDRHLELPGQPLNNYHMKTLVSYE FT CEKHPRESDWDESCLGDRLNGILLQLISCLQCRRCPHYFLPNLDLFQGKPHSALENAAK FT QTWRLAREILTNPKSLEKL" FT misc_feature 36124412 FT /note="Clone_left_end: RP11-88O19" FT mRNA join(36167143..36167584,36180563..36180715, FT AL139083.15:19322..19489,AL139083.15:37110..37172, FT AL139083.15:37500..37589,AL139083.15:40896..41088, FT AL139083.15:43046..43117,AL139083.15:46096..46251, FT AL139083.15:46820..46990,AL139083.15:56326..56427, FT AL139083.15:58615..58811,AL139083.15:59609..59760, FT AL139083.15:62142..63976) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-003" FT /product="neurobeachin" FT /note="match: cDNAs: Em:AL137748" FT mRNA join(AL138690.19:156961..157005,AL138690.19:157302..157756, FT AL161902.12:69081..69312,AL161902.12:73095..73195, FT AL161902.12:73454..73549,AL161902.12:76711..76832, FT AL161902.12:78417..78543,AL161902.12:84158..84277, FT AL161902.12:86865..87011,AL161902.12:98056..98253, FT AL161902.12:98867..99000,AL356430.19:21907..22015, FT AL356430.19:32900..33052,AL356430.19:34420..34588, FT AL356430.19:41024..41103,AL356430.19:41838..41900, FT AL356430.19:41987..42084,AL356430.19:47092..47184, FT AL356430.19:65879..65987,AL356430.19:79384..79465, FT AL356430.19:79693..79816,AL356430.19:80688..80880, FT AL356430.19:82626..83642,AL356430.19:85360..85577, FT AL356430.19:87966..88119,AL356430.19:94882..95062, FT AL356430.19:97074..97204,AL356430.19:100606..100713, FT AL356430.19:105970..106138,AL356430.19:107586..107681, FT AL356430.19:119474..119912,AL356430.19:132310..132464, FT AL356430.19:134663..134789,AL356430.19:156102..156229, FT AL357083.19:45114..45175,AL357083.19:64253..64317, FT AL357083.19:103833..103941,AL357083.19:106882..107048, FT AL161718.14:52938..53062,36026229..36026372, FT 36046537..36046673,36124614..36124731,36125067..36125169, FT 36129124..36129239,36141042..36141154,36158035..36158175, FT 36167465..36167584,36180563..36180715, FT AL139083.15:19322..19489,AL139083.15:37500..37589, FT AL139083.15:40896..41088,AL139083.15:43046..43117, FT AL139083.15:46096..46251,AL139083.15:46820..46990, FT AL139083.15:56326..56427,AL139083.15:58615..58811, FT AL139083.15:59609..59760,AL139083.15:62142..63977) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /product="neurobeachin" FT /note="match: ESTs: Em:AA460540 Em:AA633055 Em:AA668246 FT Em:AA775279 Em:AA986649 Em:AI004739 Em:AI117079 Em:AL649758 FT Em:AU118985 Em:AU170820 Em:AW632580 Em:AW961900 Em:BB253660 FT Em:BB301334 Em:BB542864 Em:BB561085 Em:BB597449 Em:BB640418 FT Em:BB648017 Em:BB861116 Em:BE010932 Em:BE080132 Em:BE534511 FT Em:BE534795 Em:BE571847 Em:BE701712 Em:BE813634 Em:BF141191 FT Em:BF226508 Em:BF328530 Em:BF328578 Em:BF328596 Em:BF328598 FT Em:BF328604 Em:BF328605 Em:BF328619 Em:BF402578 Em:BF467216 FT Em:BF673617 Em:BF675159 Em:BG246662 Em:BG654400 Em:BG655767 FT Em:BG666183 Em:BG800233 Em:BG818231 Em:BI033118 Em:BI033119 FT Em:BI033316 Em:BI342848 Em:BI656305 Em:BI688795 Em:BI988404 FT Em:BM314011 Em:BM546456 Em:BM564753 Em:BM827067 Em:BM925555 FT Em:BM933802 Em:BM939479 Em:BM942885 Em:BM946986 Em:BM982783 FT Em:BQ179118 Em:BQ179840 Em:BQ269526 Em:BQ443056 Em:BQ549977 FT Em:BQ554889 Em:H10235 Em:H15182 Em:R67302 Em:T06397 FT Em:T08985" FT /note="match: cDNAs: Em:AB046764 Em:AF072371 Em:AF072372 FT Em:AF216648 Em:AF467287 Em:AF467288 Em:AK001059 Em:M83822 FT Em:Y18276 Em:Y18277" FT CDS join(AL138690.19:157463..157756,AL161902.12:69081..69312, FT AL161902.12:73095..73195,AL161902.12:73454..73549, FT AL161902.12:76711..76832,AL161902.12:78417..78543, FT AL161902.12:84158..84277,AL161902.12:86865..87011, FT AL161902.12:98056..98253,AL161902.12:98867..99000, FT AL356430.19:21907..22015,AL356430.19:32900..33052, FT AL356430.19:34420..34588,AL356430.19:41024..41103, FT AL356430.19:41838..41900,AL356430.19:41987..42084, FT AL356430.19:47092..47184,AL356430.19:65879..65987, FT AL356430.19:79384..79465,AL356430.19:79693..79816, FT AL356430.19:80688..80880,AL356430.19:82626..83642, FT AL356430.19:85360..85577,AL356430.19:87966..88119, FT AL356430.19:94882..95062,AL356430.19:97074..97204, FT AL356430.19:100606..100713,AL356430.19:105970..106138, FT AL356430.19:107586..107681,AL356430.19:119474..119912, FT AL356430.19:132310..132464,AL356430.19:134663..134789, FT AL356430.19:156102..156229,AL357083.19:45114..45175, FT AL357083.19:64253..64317,AL357083.19:103833..103941, FT AL357083.19:106882..107048,AL161718.14:52938..53062, FT 36026229..36026372,36046537..36046673,36124614..36124731, FT 36125067..36125169,36129124..36129239,36141042..36141154, FT 36158035..36158175,36167465..36167584,36180563..36180715, FT AL139083.15:19322..19489,AL139083.15:37500..37589, FT AL139083.15:40896..41088,AL139083.15:43046..43117, FT AL139083.15:46096..46251,AL139083.15:46820..46990, FT AL139083.15:56326..56427,AL139083.15:58615..58811, FT AL139083.15:59609..59760,AL139083.15:62142..62232) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /standard_name="OTTHUMP00000018239" FT /product="neurobeachin" FT /note="match: proteins: Sw:P50851 Sw:Q19317 Sw:Q8NFP9 FT Sw:Q8NFP9 Sw:Q8NFP9 Sw:Q9DDD5 Sw:Q9EPN1 Sw:Q9EPN1 Sw:Q9EPN1 FT Sw:Q9EPN1 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 FT Tr:O18116 Tr:Q9C6Q7 Tr:Q9ESD3 Tr:Q9ESD4 Tr:Q9ESE1" FT /protein_id="CAI17182.1" FT /translation="MASEKPGPGPGLEPQPVGLIAVGAAGGGGGGSGGGGTGGSGMGEL FT RGASGSGSVMLPAGMINPSVPIRNIRMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEF FT DLEMNFIIQDAESITCMTELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQV FT LLKMSAVDDMIADLLVDMLGVLASYSITVKELKLLFSMLRGESGIWPRHAVKLLSVLNQ FT MPQRHGPDTFFNFPGCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLY FT CFRTSKGVGYSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNS FT EIRCYVNGQLVSYGDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAVYVFSEALNP FT AQIFAIHQLGPGYKSTFKFKSESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCL FT ESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLNDS FT QVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLS FT FAKYLDGLSHGAPLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIR FT RVGTVLQLMHTLKYYYWVINPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILK FT DRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVIYKL FT LASKSESIWVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNT FT LYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSTPSAELMEVRRLFLSD FT MIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNSEEQKITEMVYNIFRILLYHAIKY FT EWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQEEENIKKGKKGNVSTISGLSS FT QTTGAKGGMEIREIEDLSQSQSPESETDYPVSTDTRDLLMSTKVSDDILGNSDRPGSGV FT HVEVHDLLVDIKAEKVEATEVKLDDMDLSPETLVGGENGALVEVESLLDNVYSAAVEKL FT QNNVHGSVGIIKKNEEKDNGPLITLADEKEDLPNSSTSFLFDKIPKQEEKLLPELSSNH FT IIPNIQDTQVHLGVSDDLGLLAHMTGSVDLTCTSSIIEEKEFKIHTTSDGMSSISERDL FT ASSTKGLEYAEMTATTLETESSSSKIVPNIDAGSIISDTERSDDGKESGKEIRKIQTTT FT TTQAVQGRSITQQDRDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRL FT LTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILP FT LLSAATSPTTELENIEVTQGMSAETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSS FT GGLMRQCLRLVCCVAVRNCLECRQRQRDRGNKSSHGSSKPQEVPQSVTATAASKTPLEN FT VPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDI FT LEPQRETTRTGSQPGRNIRQEINSPTSTVVVIPSIPHPSLNHGFLAKLIPEQSFGHSFY FT KETPAAFPDTIKEKETPTPGEDIQVESSIPHTDSGIGEEQVASILNGAELETSTGPDAM FT SELLSTLSSEVKKSQESLTENPSETLKPATSISSISQTKGINVKEILKSLVAAPVEIAE FT CGPEPIPYPDPALKRETQAILPMQFHSFDRSVVVPVKKPPPGSLAVTTVGATTAGSGLP FT TGSTSNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFVNGATSKNLPAVQTVAPMPED FT SAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSTSV FT VELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAE FT DVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAW FT GAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVKSKKT FT FRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLS FT ITTTEIYFEVDEDDSAFKKIDTKVLAYTEGLHGKWMFSEIRAVFSRRYLLQNTALEVFM FT ANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQ FT RREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGA FT LNPKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFD FT HPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDL FT PPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGS FT VNLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQ FT DVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLD FT QAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFR FT VYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGD FT NPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPE FT NCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTG FT GDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWH FT YEHQNRY" FT CDS join(36180596..36180715,AL139083.15:19322..19489, FT AL139083.15:37110..37172,AL139083.15:37500..37589, FT AL139083.15:40896..41088,AL139083.15:43046..43117, FT AL139083.15:46096..46251,AL139083.15:46820..46990, FT AL139083.15:56326..56427,AL139083.15:58615..58811, FT AL139083.15:59609..59760,AL139083.15:62142..62232) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-003" FT /standard_name="OTTHUMP00000018240" FT /product="neurobeachin" FT /note="match: proteins: Sw:Q8NFP9" FT /protein_id="CAI17183.1" FT /translation="MFVNSNGYNLGVREDEVVVNDVDLPPWAKKPEDFVRINRMALESE FT FVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREIPEAYFIR FT DPHTFLLTKDFIKAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQ FT DVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLD FT QAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFR FT VYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGD FT NPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPE FT NCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTG FT GDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWH FT YEHQNRY" FT misc_feature 36182802 FT /note="Clone_right_end: RP11-98D3" FT misc_feature complement(36182903..36184896) FT /note="annotated region of clone" FT misc_feature 36184897..36344977 FT /note="annotated region of clone" FT mRNA join(36245187..36245371,36246935..36247159) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-004" FT /product="neurobeachin" FT /note="match: ESTs: Em:AA972023 Em:AW182351" FT polyA_signal 36246843..36246848 FT polyA_signal 36246852..36246857 FT polyA_site 36246873 FT mRNA join(36271661..36271773,36272876..36273138) FT /locus_tag="RP11-270C18.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI217388 Em:AI653118 Em:AI867877 FT Em:AI989878 Em:AW003038 Em:AW235382 Em:AW236995 FT Em:AW450689" FT mRNA join(36271864..36271988,36272876..36273393) FT /locus_tag="RP11-270C18.2-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA758568" FT polyA_site 36273138 FT polyA_signal 36273343..36273348 FT misc_feature 36301217 FT /note="Clone_right_end: RP11-88O19" FT misc_feature 36306415..36306428 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 36306596..36306642 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA join(AL390071.9:155239..155680,AL390071.9:168659..168811, FT 36202218..36202385,36220006..36220068,36220396..36220485, FT 36223792..36223984,36225942..36226013,36228992..36229147, FT 36229716..36229886,36239222..36239323,36241511..36241707, FT 36242505..36242656,36245038..36246872) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-003" FT /product="neurobeachin" FT /note="match: cDNAs: Em:AL137748" FT mRNA join(AL138690.19:156961..157005,AL138690.19:157302..157756, FT AL161902.12:69081..69312,AL161902.12:73095..73195, FT AL161902.12:73454..73549,AL161902.12:76711..76832, FT AL161902.12:78417..78543,AL161902.12:84158..84277, FT AL161902.12:86865..87011,AL161902.12:98056..98253, FT AL161902.12:98867..99000,AL356430.19:21907..22015, FT AL356430.19:32900..33052,AL356430.19:34420..34588, FT AL356430.19:41024..41103,AL356430.19:41838..41900, FT AL356430.19:41987..42084,AL356430.19:47092..47184, FT AL356430.19:65879..65987,AL356430.19:79384..79465, FT AL356430.19:79693..79816,AL356430.19:80688..80880, FT AL356430.19:82626..83642,AL356430.19:85360..85577, FT AL356430.19:87966..88119,AL356430.19:94882..95062, FT AL356430.19:97074..97204,AL356430.19:100606..100713, FT AL356430.19:105970..106138,AL356430.19:107586..107681, FT AL356430.19:119474..119912,AL356430.19:132310..132464, FT AL356430.19:134663..134789,AL356430.19:156102..156229, FT AL357083.19:45114..45175,AL357083.19:64253..64317, FT AL357083.19:103833..103941,AL357083.19:106882..107048, FT AL161718.14:52938..53062,AL390071.9:14325..14468, FT AL390071.9:34633..34769,AL390071.9:112710..112827, FT AL390071.9:113163..113265,AL390071.9:117220..117335, FT AL390071.9:129138..129250,AL390071.9:146131..146271, FT AL390071.9:155561..155680,AL390071.9:168659..168811, FT 36202218..36202385,36220396..36220485,36223792..36223984, FT 36225942..36226013,36228992..36229147,36229716..36229886, FT 36239222..36239323,36241511..36241707,36242505..36242656, FT 36245038..36246873) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /product="neurobeachin" FT /note="match: cDNAs: Em:AB046764 Em:AF072371 Em:AF072372 FT Em:AF216648 Em:AF467287 Em:AF467288 Em:AK001059 Em:M83822 FT Em:Y18276 Em:Y18277" FT /note="match: ESTs: Em:AA460540 Em:AA633055 Em:AA668246 FT Em:AA775279 Em:AA986649 Em:AI004739 Em:AI117079 Em:AL649758 FT Em:AU118985 Em:AU170820 Em:AW632580 Em:AW961900 Em:BB253660 FT Em:BB301334 Em:BB542864 Em:BB561085 Em:BB597449 Em:BB640418 FT Em:BB648017 Em:BB861116 Em:BE010932 Em:BE080132 Em:BE534511 FT Em:BE534795 Em:BE571847 Em:BE701712 Em:BE813634 Em:BF141191 FT Em:BF226508 Em:BF328530 Em:BF328578 Em:BF328596 Em:BF328598 FT Em:BF328604 Em:BF328605 Em:BF328619 Em:BF402578 Em:BF467216 FT Em:BF673617 Em:BF675159 Em:BG246662 Em:BG654400 Em:BG655767 FT Em:BG666183 Em:BG800233 Em:BG818231 Em:BI033118 Em:BI033119 FT Em:BI033316 Em:BI342848 Em:BI656305 Em:BI688795 Em:BI988404 FT Em:BM314011 Em:BM546456 Em:BM564753 Em:BM827067 Em:BM925555 FT Em:BM933802 Em:BM939479 Em:BM942885 Em:BM946986 Em:BM982783 FT Em:BQ179118 Em:BQ179840 Em:BQ269526 Em:BQ443056 Em:BQ549977 FT Em:BQ554889 Em:H10235 Em:H15182 Em:R67302 Em:T06397 FT Em:T08985" FT CDS join(AL138690.19:157463..157756,AL161902.12:69081..69312, FT AL161902.12:73095..73195,AL161902.12:73454..73549, FT AL161902.12:76711..76832,AL161902.12:78417..78543, FT AL161902.12:84158..84277,AL161902.12:86865..87011, FT AL161902.12:98056..98253,AL161902.12:98867..99000, FT AL356430.19:21907..22015,AL356430.19:32900..33052, FT AL356430.19:34420..34588,AL356430.19:41024..41103, FT AL356430.19:41838..41900,AL356430.19:41987..42084, FT AL356430.19:47092..47184,AL356430.19:65879..65987, FT AL356430.19:79384..79465,AL356430.19:79693..79816, FT AL356430.19:80688..80880,AL356430.19:82626..83642, FT AL356430.19:85360..85577,AL356430.19:87966..88119, FT AL356430.19:94882..95062,AL356430.19:97074..97204, FT AL356430.19:100606..100713,AL356430.19:105970..106138, FT AL356430.19:107586..107681,AL356430.19:119474..119912, FT AL356430.19:132310..132464,AL356430.19:134663..134789, FT AL356430.19:156102..156229,AL357083.19:45114..45175, FT AL357083.19:64253..64317,AL357083.19:103833..103941, FT AL357083.19:106882..107048,AL161718.14:52938..53062, FT AL390071.9:14325..14468,AL390071.9:34633..34769, FT AL390071.9:112710..112827,AL390071.9:113163..113265, FT AL390071.9:117220..117335,AL390071.9:129138..129250, FT AL390071.9:146131..146271,AL390071.9:155561..155680, FT AL390071.9:168659..168811,36202218..36202385, FT 36220396..36220485,36223792..36223984,36225942..36226013, FT 36228992..36229147,36229716..36229886,36239222..36239323, FT 36241511..36241707,36242505..36242656,36245038..36245128) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-001" FT /standard_name="OTTHUMP00000018239" FT /product="neurobeachin" FT /note="match: proteins: Sw:P50851 Sw:Q19317 Sw:Q8NFP9 FT Sw:Q8NFP9 Sw:Q8NFP9 Sw:Q9DDD5 Sw:Q9EPN1 Sw:Q9EPN1 Sw:Q9EPN1 FT Sw:Q9EPN1 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 Sw:Q9W4E2 FT Tr:O18116 Tr:Q9C6Q7 Tr:Q9ESD3 Tr:Q9ESD4 Tr:Q9ESE1" FT /protein_id="CAH71882.1" FT /translation="MASEKPGPGPGLEPQPVGLIAVGAAGGGGGGSGGGGTGGSGMGEL FT RGASGSGSVMLPAGMINPSVPIRNIRMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEF FT DLEMNFIIQDAESITCMTELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQV FT LLKMSAVDDMIADLLVDMLGVLASYSITVKELKLLFSMLRGESGIWPRHAVKLLSVLNQ FT MPQRHGPDTFFNFPGCSAAAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLY FT CFRTSKGVGYSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNS FT EIRCYVNGQLVSYGDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAVYVFSEALNP FT AQIFAIHQLGPGYKSTFKFKSESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCL FT ESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLNDS FT QVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLS FT FAKYLDGLSHGAPLLKQLCDHILFNPAIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIR FT RVGTVLQLMHTLKYYYWVINPADSSGITPKGLDGPRPSQKEIISLRAFMLLFLKQLILK FT DRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVIYKL FT LASKSESIWVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMLHTNTVTVTTYNT FT LYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSTPSAELMEVRRLFLSD FT MIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNSEEQKITEMVYNIFRILLYHAIKY FT EWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQEEENIKKGKKGNVSTISGLSS FT QTTGAKGGMEIREIEDLSQSQSPESETDYPVSTDTRDLLMSTKVSDDILGNSDRPGSGV FT HVEVHDLLVDIKAEKVEATEVKLDDMDLSPETLVGGENGALVEVESLLDNVYSAAVEKL FT QNNVHGSVGIIKKNEEKDNGPLITLADEKEDLPNSSTSFLFDKIPKQEEKLLPELSSNH FT IIPNIQDTQVHLGVSDDLGLLAHMTGSVDLTCTSSIIEEKEFKIHTTSDGMSSISERDL FT ASSTKGLEYAEMTATTLETESSSSKIVPNIDAGSIISDTERSDDGKESGKEIRKIQTTT FT TTQAVQGRSITQQDRDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRL FT LTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILP FT LLSAATSPTTELENIEVTQGMSAETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSS FT GGLMRQCLRLVCCVAVRNCLECRQRQRDRGNKSSHGSSKPQEVPQSVTATAASKTPLEN FT VPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDI FT LEPQRETTRTGSQPGRNIRQEINSPTSTVVVIPSIPHPSLNHGFLAKLIPEQSFGHSFY FT KETPAAFPDTIKEKETPTPGEDIQVESSIPHTDSGIGEEQVASILNGAELETSTGPDAM FT SELLSTLSSEVKKSQESLTENPSETLKPATSISSISQTKGINVKEILKSLVAAPVEIAE FT CGPEPIPYPDPALKRETQAILPMQFHSFDRSVVVPVKKPPPGSLAVTTVGATTAGSGLP FT TGSTSNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFVNGATSKNLPAVQTVAPMPED FT SAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGLVCMKSSTSV FT VELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAE FT DVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAW FT GAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIEYGTEEDVVKSKKT FT FRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLIAPVVVAKGTLS FT ITTTEIYFEVDEDDSAFKKIDTKVLAYTEGLHGKWMFSEIRAVFSRRYLLQNTALEVFM FT ANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLYKSSNMTQRWQ FT RREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGA FT LNPKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFD FT HPDRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDL FT PPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGS FT VNLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQ FT DVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLD FT QAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFR FT VYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGD FT NPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPE FT NCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTG FT GDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWH FT YEHQNRY" FT misc_feature 36340978 FT /note="Clone_left_end: RP11-113P14" FT CDS join(AL390071.9:168692..168811,36202218..36202385, FT 36220006..36220068,36220396..36220485,36223792..36223984, FT 36225942..36226013,36228992..36229147,36229716..36229886, FT 36239222..36239323,36241511..36241707,36242505..36242656, FT 36245038..36245128) FT /gene="NBEA" FT /locus_tag="RP11-270C18.1-003" FT /standard_name="OTTHUMP00000018240" FT /product="neurobeachin" FT /note="match: proteins: Sw:Q8NFP9" FT /protein_id="CAH71883.1" FT /translation="MFVNSNGYNLGVREDEVVVNDVDLPPWAKKPEDFVRINRMALESE FT FVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREIPEAYFIR FT DPHTFLLTKDFIKAMEAQIQNFGQTPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQ FT DVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVNRWHNTVGLRGAPGYSLD FT QAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGFWDKSFR FT VYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGD FT NPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPE FT NCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTG FT GDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTLITGMASGSIVAFNIDFNRWH FT YEHQNRY" FT misc_feature 36344978..36451626 FT /note="annotated region of clone" FT polyA_site complement(36345476) FT polyA_signal complement(36345489..36345494) FT polyA_signal complement(36345518..36345523) FT misc_feature 36346322 FT /note="Clone_right_end: RP11-270C18" FT CDS complement(join(36348779..36348836,36362349..36362422, FT 36367503..36367616,36379836..36379916,36382361..36382457, FT 36383155..36383232,36384972..36385105,36396866..36397012, FT 36401772..36401891,36402387..36402444,36410170..36410278, FT 36413229..36413313,36428636..36428730,36445361..36445477, FT AL390029.35:69969..70068,AL157694.7:70263..70609, FT AL160392.12:7917..8292)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-006" FT /standard_name="OTTHUMP00000018250" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: proteins: Tr:Q5VZZ0.1" FT /protein_id="CAH70168.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRSSQHGGSSTSLASTKVCSSMDENDGPGEEVSEEGFQIPATITERYKVGRTIGDG FT NFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVP FT TELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENL FT LVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVI FT TYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQR FT FSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIALDHGFTIK FT RSGSLDYYQQPGMYWIRPPLLIRRGRFSDEDATRM" FT CDS complement(join(36348672..36348836,36367503..36367616, FT 36379836..36379916,36382361..36382457,36383155..36383232, FT 36384972..36385105,36396866..36397012,36401772..36401891, FT 36402387..36402444,36410170..36410278,36413229..36413313, FT 36428636..36428730,36445361..36445477, FT AL390029.35:69969..70068,AL157694.7:70263..70609, FT AL160392.12:7917..8292)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-010" FT /standard_name="OTTHUMP00000018251" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: proteins: Sw:O08875 Sw:O15075 Sw:Q9JLM8 FT Tr:Q9JLM6 Tr:Q9JLM7" FT /protein_id="CAH70167.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRSSQHGGSSTSLASTKVCSSMDENDGPGEEVSEEGFQIPATITERYKVGRTIGDG FT NFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVP FT TELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENL FT LVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVI FT TYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQR FT FSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIATTALDKER FT QVFRRRRNQDVRSRYKAQPAPPELNSESEDYSPSSSETVRSPNSPF" FT CDS complement(join(36424857..36424913,36428636..36428730, FT 36445361..36445477,AL390029.35:69969..70068, FT AL157694.7:70263..70609,AL160392.12:7917..8292)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-001" FT /standard_name="OTTHUMP00000018248" FT /product="doublecortin and CaM kinase-like 1" FT /protein_id="CAH70169.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRDLYRPLSSDDLDSVGDSV" FT mRNA complement(join(36345478..36348836,36362349..36362422, FT 36367503..36367616,36379836..36379916,36382361..36382457, FT 36383155..36383232,36384972..36385105,36396866..36397012, FT 36401772..36401891,36402387..36402444,36410170..36410278, FT 36413229..36413313,36428636..36428730,36445361..36445477, FT AL390029.35:69969..70068,AL157694.7:70263..70609, FT AL160392.12:7917..8311,AL160392.12:13269..13461)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-006" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: ESTs: Em:BP309971.1 Em:BQ711413.1 FT Em:CD652985.1 Em:DA220246.1 Em:DA242816.1 Em:DA337045.1 FT Em:DA803466.1 Em:DB226155.1" FT /note="match: cDNAs: Em:AB002367.1" FT mRNA complement(join(36345478..36348836,36367503..36367616, FT 36379836..36379916,36382361..36382457,36383155..36383232, FT 36384972..36385105,36396866..36397012,36401772..36401891, FT 36402387..36402444,36410170..36410278,36413229..36413313, FT 36428636..36428730,36445361..36445477, FT AL390029.35:69969..70068,AL157694.7:70263..70609, FT AL160392.12:7917..8311,AL160392.12:13269..13461)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-010" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: cDNAs: Em:AF155819 Em:AF155820" FT mRNA complement(join(36424060..36424913,36428636..36428730, FT 36445361..36445477,AL390029.35:69969..70068, FT AL157694.7:70263..70609,AL160392.12:7917..8311, FT AL160392.12:13269..13461)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-001" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: ESTs: Em:BB823604 Em:BB830312 Em:BB831291" FT /note="match: cDNAs: Em:BC021354" FT mRNA complement(join(36361995..36362422,36367503..36367616)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-013" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: ESTs: Em:BB356699" FT mRNA complement(join(36379453..36379916,36382361..36382474)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-012" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: ESTs: Em:AW498483" FT polyA_site complement(36420039) FT polyA_signal complement(36420051..36420056) FT mRNA complement(join(36345478..36348836,36367503..36367616, FT 36379836..36379916,36382361..36382457,36383155..36383232, FT 36384972..36385105,36396866..36397012,36401772..36401891, FT 36402387..36402444,36410170..36410278,36413229..36413313, FT 36428636..36428730,36429647..36429779)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-011" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: ESTs: Em:AV209156 Em:AV209193 Em:BF950327 FT Em:BI546546" FT /note="match: cDNAs: Em:AF155821 Em:U78857" FT CDS complement(join(36348672..36348836,36367503..36367616, FT 36379836..36379916,36382361..36382457,36383155..36383232, FT 36384972..36385105,36396866..36397012,36401772..36401891, FT 36402387..36402444,36410170..36410278,36413229..36413313, FT 36428636..36428730,36429647..36429665)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-011" FT /standard_name="OTTHUMP00000018252" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: proteins: Sw:O08875 Tr:Q9JLM6" FT /protein_id="CAH70170.1" FT /translation="MLELIEVNGTPGSQLSTPRSGKSPSPSPTSPGSLRKQRSSQHGGS FT STSLASTKVCSSMDENDGPGEEVSEEGFQIPATITERYKVGRTIGDGNFAVVKECVERS FT TAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVPTELYLVMELVKG FT GDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLVYEHQDGSKSL FT KLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGFPPFR FT GSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQRFSAVQVLEHPWV FT NDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIATTALDKERQVFRRRRNQDVR FT SRYKAQPAPPELNSESEDYSPSSSETVRSPNSPF" FT mRNA complement(join(36420037..36424913,36428636..36428730, FT 36429647..36429921)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-008" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: ESTs: Em:AA033625 Em:AA360492 Em:AA829556 FT Em:AI129626 Em:AI151863 Em:AI655819 Em:AI919274 Em:AL046966 FT Em:AL710910 Em:BB647689 Em:BB821445 Em:BG167144 Em:BG695599 FT Em:BG705295 Em:BI081848 Em:BI107783 Em:BM682165 Em:BM729248 FT Em:BM933369 Em:BM939613" FT /note="match: cDNAs: Em:AF030089 Em:AF045469" FT misc_feature 36449527 FT /note="Clone_left_end: RP11-560N15" FT misc_feature 36451627..36615843 FT /note="annotated region of clone" FT CDS complement(join(AL157760.9:5802..5859, FT AL157760.9:19372..19445,AL157760.9:24526..24639, FT AL157760.9:36859..36939,AL157760.9:39384..39480, FT AL157760.9:40178..40255,AL157760.9:41995..42128, FT AL157760.9:53889..54035,AL157760.9:58795..58914, FT AL157760.9:59410..59467,AL157760.9:67193..67301, FT AL157760.9:70252..70336,AL157760.9:85659..85753, FT AL157760.9:102384..102500,36521495..36521594, FT AL157694.7:70263..70609,AL160392.12:7917..8292)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-006" FT /standard_name="OTTHUMP00000018250" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: proteins: Tr:Q5VZZ0.1" FT /protein_id="CAI15720.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRSSQHGGSSTSLASTKVCSSMDENDGPGEEVSEEGFQIPATITERYKVGRTIGDG FT NFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVP FT TELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENL FT LVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVI FT TYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQR FT FSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIALDHGFTIK FT RSGSLDYYQQPGMYWIRPPLLIRRGRFSDEDATRM" FT CDS complement(join(AL157760.9:5695..5859, FT AL157760.9:24526..24639,AL157760.9:36859..36939, FT AL157760.9:39384..39480,AL157760.9:40178..40255, FT AL157760.9:41995..42128,AL157760.9:53889..54035, FT AL157760.9:58795..58914,AL157760.9:59410..59467, FT AL157760.9:67193..67301,AL157760.9:70252..70336, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT 36521495..36521594,AL157694.7:70263..70609, FT AL160392.12:7917..8292)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-010" FT /standard_name="OTTHUMP00000018251" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: proteins: Sw:O08875 Sw:O15075 Sw:Q9JLM8 FT Tr:Q9JLM6 Tr:Q9JLM7" FT /protein_id="CAI15721.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRSSQHGGSSTSLASTKVCSSMDENDGPGEEVSEEGFQIPATITERYKVGRTIGDG FT NFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVP FT TELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENL FT LVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVI FT TYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQR FT FSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIATTALDKER FT QVFRRRRNQDVRSRYKAQPAPPELNSESEDYSPSSSETVRSPNSPF" FT CDS complement(join(AL157760.9:81880..81936, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT 36521495..36521594,AL157694.7:70263..70609, FT AL160392.12:7917..8292)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-001" FT /standard_name="OTTHUMP00000018248" FT /product="doublecortin and CaM kinase-like 1" FT /protein_id="CAI15722.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRDLYRPLSSDDLDSVGDSV" FT mRNA complement(join(AL157760.9:2501..5859, FT AL157760.9:19372..19445,AL157760.9:24526..24639, FT AL157760.9:36859..36939,AL157760.9:39384..39480, FT AL157760.9:40178..40255,AL157760.9:41995..42128, FT AL157760.9:53889..54035,AL157760.9:58795..58914, FT AL157760.9:59410..59467,AL157760.9:67193..67301, FT AL157760.9:70252..70336,AL157760.9:85659..85753, FT AL157760.9:102384..102500,36521495..36521594, FT AL157694.7:70263..70609,AL160392.12:7917..8311, FT AL160392.12:13269..13461)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-006" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: cDNAs: Em:AB002367.1" FT /note="match: ESTs: Em:BP309971.1 Em:BQ711413.1 FT Em:CD652985.1 Em:DA220246.1 Em:DA242816.1 Em:DA337045.1 FT Em:DA803466.1 Em:DB226155.1" FT mRNA complement(join(AL157760.9:2501..5859, FT AL157760.9:24526..24639,AL157760.9:36859..36939, FT AL157760.9:39384..39480,AL157760.9:40178..40255, FT AL157760.9:41995..42128,AL157760.9:53889..54035, FT AL157760.9:58795..58914,AL157760.9:59410..59467, FT AL157760.9:67193..67301,AL157760.9:70252..70336, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT 36521495..36521594,AL157694.7:70263..70609, FT AL160392.12:7917..8311,AL160392.12:13269..13461)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-010" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: cDNAs: Em:AF155819 Em:AF155820" FT mRNA complement(join(AL157760.9:81083..81936, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT 36521495..36521594,AL157694.7:70263..70609, FT AL160392.12:7917..8311,AL160392.12:13269..13461)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-001" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: cDNAs: Em:BC021354" FT /note="match: ESTs: Em:BB823604 Em:BB830312 Em:BB831291" FT misc_feature 36513319 FT /note="Clone_right_end: RP11-113P14" FT misc_feature 36531854..36532321 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 36531982..36532228 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 36532322 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 700bp by restriction digest data" FT misc_feature 36538389 FT /note="Clone_left_end: RP11-157B21" FT misc_feature 36556490..36556505 FT /note="Sequence from uni-directional primer reads and dGTP FT big dye terminator reads only" FT misc_feature 36615743 FT /note="Clone_right_end: RP11-560N15" FT misc_feature 36615844..36692082 FT /note="annotated region of clone" FT CDS complement(join(AL157760.9:5802..5859, FT AL157760.9:19372..19445,AL157760.9:24526..24639, FT AL157760.9:36859..36939,AL157760.9:39384..39480, FT AL157760.9:40178..40255,AL157760.9:41995..42128, FT AL157760.9:53889..54035,AL157760.9:58795..58914, FT AL157760.9:59410..59467,AL157760.9:67193..67301, FT AL157760.9:70252..70336,AL157760.9:85659..85753, FT AL157760.9:102384..102500,AL390029.35:69969..70068, FT 36686006..36686352,AL160392.12:7917..8292)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-006" FT /standard_name="OTTHUMP00000018250" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: proteins: Tr:Q5VZZ0.1" FT /protein_id="CAH70657.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRSSQHGGSSTSLASTKVCSSMDENDGPGEEVSEEGFQIPATITERYKVGRTIGDG FT NFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVP FT TELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENL FT LVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVI FT TYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQR FT FSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIALDHGFTIK FT RSGSLDYYQQPGMYWIRPPLLIRRGRFSDEDATRM" FT CDS complement(join(AL157760.9:5695..5859, FT AL157760.9:24526..24639,AL157760.9:36859..36939, FT AL157760.9:39384..39480,AL157760.9:40178..40255, FT AL157760.9:41995..42128,AL157760.9:53889..54035, FT AL157760.9:58795..58914,AL157760.9:59410..59467, FT AL157760.9:67193..67301,AL157760.9:70252..70336, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT AL390029.35:69969..70068,36686006..36686352, FT AL160392.12:7917..8292)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-010" FT /standard_name="OTTHUMP00000018251" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: proteins: Sw:O08875 Sw:O15075 Sw:Q9JLM8 FT Tr:Q9JLM6 Tr:Q9JLM7" FT /protein_id="CAH70656.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRSSQHGGSSTSLASTKVCSSMDENDGPGEEVSEEGFQIPATITERYKVGRTIGDG FT NFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVP FT TELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENL FT LVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVI FT TYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQR FT FSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIATTALDKER FT QVFRRRRNQDVRSRYKAQPAPPELNSESEDYSPSSSETVRSPNSPF" FT CDS complement(join(AL157760.9:81880..81936, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT AL390029.35:69969..70068,36686006..36686352, FT AL160392.12:7917..8292)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-001" FT /standard_name="OTTHUMP00000018248" FT /product="doublecortin and CaM kinase-like 1" FT /protein_id="CAH70658.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRDLYRPLSSDDLDSVGDSV" FT mRNA complement(join(AL157760.9:2501..5859, FT AL157760.9:19372..19445,AL157760.9:24526..24639, FT AL157760.9:36859..36939,AL157760.9:39384..39480, FT AL157760.9:40178..40255,AL157760.9:41995..42128, FT AL157760.9:53889..54035,AL157760.9:58795..58914, FT AL157760.9:59410..59467,AL157760.9:67193..67301, FT AL157760.9:70252..70336,AL157760.9:85659..85753, FT AL157760.9:102384..102500,AL390029.35:69969..70068, FT 36686006..36686352,AL160392.12:7917..8311, FT AL160392.12:13269..13461)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-006" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: cDNAs: Em:AB002367.1" FT /note="match: ESTs: Em:BP309971.1 Em:BQ711413.1 FT Em:CD652985.1 Em:DA220246.1 Em:DA242816.1 Em:DA337045.1 FT Em:DA803466.1 Em:DB226155.1" FT mRNA complement(join(AL157760.9:2501..5859, FT AL157760.9:24526..24639,AL157760.9:36859..36939, FT AL157760.9:39384..39480,AL157760.9:40178..40255, FT AL157760.9:41995..42128,AL157760.9:53889..54035, FT AL157760.9:58795..58914,AL157760.9:59410..59467, FT AL157760.9:67193..67301,AL157760.9:70252..70336, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT AL390029.35:69969..70068,36686006..36686352, FT AL160392.12:7917..8311,AL160392.12:13269..13461)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-010" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: cDNAs: Em:AF155819 Em:AF155820" FT mRNA complement(join(AL157760.9:81083..81936, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT AL390029.35:69969..70068,36686006..36686352, FT AL160392.12:7917..8311,AL160392.12:13269..13461)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-001" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: cDNAs: Em:BC021354" FT /note="match: ESTs: Em:BB823604 Em:BB830312 Em:BB831291" FT misc_feature 36688038 FT /note="Clone_left_end: RP11-560N15" FT misc_feature 36691982 FT /note="Clone_right_end: RP11-157B21" FT misc_feature 36692083..36798567 FT /note="annotated region of clone" FT CDS complement(join(AL157760.9:5802..5859, FT AL157760.9:19372..19445,AL157760.9:24526..24639, FT AL157760.9:36859..36939,AL157760.9:39384..39480, FT AL157760.9:40178..40255,AL157760.9:41995..42128, FT AL157760.9:53889..54035,AL157760.9:58795..58914, FT AL157760.9:59410..59467,AL157760.9:67193..67301, FT AL157760.9:70252..70336,AL157760.9:85659..85753, FT AL157760.9:102384..102500,AL390029.35:69969..70068, FT AL157694.7:70263..70609,36699899..36700274)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-006" FT /standard_name="OTTHUMP00000018250" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: proteins: Tr:Q5VZZ0.1" FT /protein_id="CAH70262.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRSSQHGGSSTSLASTKVCSSMDENDGPGEEVSEEGFQIPATITERYKVGRTIGDG FT NFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVP FT TELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENL FT LVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVI FT TYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQR FT FSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIALDHGFTIK FT RSGSLDYYQQPGMYWIRPPLLIRRGRFSDEDATRM" FT CDS complement(join(AL157760.9:5695..5859, FT AL157760.9:24526..24639,AL157760.9:36859..36939, FT AL157760.9:39384..39480,AL157760.9:40178..40255, FT AL157760.9:41995..42128,AL157760.9:53889..54035, FT AL157760.9:58795..58914,AL157760.9:59410..59467, FT AL157760.9:67193..67301,AL157760.9:70252..70336, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT AL390029.35:69969..70068,AL157694.7:70263..70609, FT 36699899..36700274)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-010" FT /standard_name="OTTHUMP00000018251" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: proteins: Sw:O08875 Sw:O15075 Sw:Q9JLM8 FT Tr:Q9JLM6 Tr:Q9JLM7" FT /protein_id="CAH70261.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRSSQHGGSSTSLASTKVCSSMDENDGPGEEVSEEGFQIPATITERYKVGRTIGDG FT NFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVP FT TELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENL FT LVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVI FT TYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQR FT FSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIATTALDKER FT QVFRRRRNQDVRSRYKAQPAPPELNSESEDYSPSSSETVRSPNSPF" FT CDS complement(join(AL157760.9:81880..81936, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT AL390029.35:69969..70068,AL157694.7:70263..70609, FT 36699899..36700274)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-001" FT /standard_name="OTTHUMP00000018248" FT /product="doublecortin and CaM kinase-like 1" FT /protein_id="CAH70263.1" FT /translation="MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTR FT TLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQG FT VRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAV FT SSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITD FT AIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKS FT TSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGS FT LRKQRDLYRPLSSDDLDSVGDSV" FT mRNA complement(join(AL157760.9:2501..5859, FT AL157760.9:19372..19445,AL157760.9:24526..24639, FT AL157760.9:36859..36939,AL157760.9:39384..39480, FT AL157760.9:40178..40255,AL157760.9:41995..42128, FT AL157760.9:53889..54035,AL157760.9:58795..58914, FT AL157760.9:59410..59467,AL157760.9:67193..67301, FT AL157760.9:70252..70336,AL157760.9:85659..85753, FT AL157760.9:102384..102500,AL390029.35:69969..70068, FT AL157694.7:70263..70609,36699899..36700293, FT 36705251..36705443)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-006" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: ESTs: Em:BP309971.1 Em:BQ711413.1 FT Em:CD652985.1 Em:DA220246.1 Em:DA242816.1 Em:DA337045.1 FT Em:DA803466.1 Em:DB226155.1" FT /note="match: cDNAs: Em:AB002367.1" FT mRNA complement(join(AL157760.9:2501..5859, FT AL157760.9:24526..24639,AL157760.9:36859..36939, FT AL157760.9:39384..39480,AL157760.9:40178..40255, FT AL157760.9:41995..42128,AL157760.9:53889..54035, FT AL157760.9:58795..58914,AL157760.9:59410..59467, FT AL157760.9:67193..67301,AL157760.9:70252..70336, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT AL390029.35:69969..70068,AL157694.7:70263..70609, FT 36699899..36700293,36705251..36705443)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-010" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: cDNAs: Em:AF155819 Em:AF155820" FT mRNA complement(join(AL157760.9:81083..81936, FT AL157760.9:85659..85753,AL157760.9:102384..102500, FT AL390029.35:69969..70068,AL157694.7:70263..70609, FT 36699899..36700293,36705251..36705443)) FT /gene="DCAMKL1" FT /locus_tag="RP11-113P14.1-001" FT /product="doublecortin and CaM kinase-like 1" FT /note="match: ESTs: Em:BB823604 Em:BB830312 Em:BB831291" FT /note="match: cDNAs: Em:BC021354" FT polyA_site complement(36742345) FT polyA_site complement(36742354) FT polyA_site complement(36742378) FT polyA_signal complement(36742378..36742383) FT mRNA complement(join(36742345..36743191,36744668..36744924, FT 36747829..36747947,36748613..36748704,36748859..36749006, FT 36764083..36764193,36765932..36766031,36767758..36767862, FT 36767943..36768004,36776016..36776230,36788616..36788752)) FT /gene="SOHLH2" FT /locus_tag="RP11-121N13.2-001" FT /product="spermatogenesis and oogenesis specific basic FT helix-loop-helix 2" FT /note="match: ESTs: Em:BG723709.1 Em:BU570664.1 FT Em:BX115891.1 Em:DB022954.1" FT /note="match: cDNAs: Em:AK000456.1 Em:AY884305.1" FT CDS complement(join(36743171..36743191,36744668..36744924, FT 36747829..36747947,36748613..36748704,36748859..36749006, FT 36764083..36764193,36765932..36766031,36767758..36767862, FT 36767943..36768004,36776016..36776230,36788616..36788663)) FT /gene="SOHLH2" FT /locus_tag="RP11-121N13.2-001" FT /standard_name="OTTHUMP00000018247" FT /product="spermatogenesis and oogenesis specific basic FT helix-loop-helix 2" FT /note="match: proteins: Tr:Q96QX4.1 Tr:Q9NX45.1" FT /protein_id="CAC42466.1" FT /translation="MASSIICQEHCQISGQAKIDILLVGDVTVGYLADTVQKLFANIAE FT VTITISDTKEAAALLDDCIFNMVLLKVPSSLSAEELEAIKLIRFGKKKNTHSLFVFIIP FT ENFKGCISGHGMDIALTEPLTMEKMSNVVKYWTTCPSNTVKTENATGPEELGLPLQRSY FT SEHLGYFPTDLFACSESLRNGNGLELNASLSEFEKNKKISLLHSSKEKLRRERIKYCCE FT QLRTLLPYVKGRKNDAASVLEATVDYVKYIREKISPAVMAQITEALQSNMRFCKKQQTP FT IELSLPGTVMAQRENSVMSTYSPERGLQFLTNTCWNGCSTPDAESSLDEAVRVPSSSAS FT ENAIGDPYKTHISSAALSLNSLHTVRYYSKVTPSYDATAVTNQNISIHLPSAMPPVSKL FT LPRHCTSGLGQTCTTHPNCLQQFWAY" FT misc_feature 36798368 FT /note="Clone_left_end: RP11-251J8" FT misc_feature 36798568..36952431 FT /note="annotated region of clone" FT polyA_site complement(36801311) FT polyA_site complement(36805215) FT polyA_signal complement(36805232..36805237) FT mRNA complement(join(36801309..36801518,36818594..36818750, FT 36822743..36822819,36827940..36827998)) FT /locus_tag="RP11-251J8.1-003" FT /product="novel protein" FT /note="match: ESTs: Em:AI636904.1" FT misc_feature 36844909 FT /note="Clone_right_end: RP11-121N13" FT CDS complement(join(36801338..36801518,36822743..36822819, FT 36827940..36827993,36828182..36828280,36857606..36857614)) FT /locus_tag="RP11-251J8.1-002" FT /standard_name="OTTHUMP00000018257" FT /product="novel protein" FT /note="match: proteins: Tr:Q9H1T5" FT /protein_id="CAC17477.1" FT /translation="MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNER FT RTYLAEMSQGSGLHQVSKRQQVDQLPRMQENLVKTLLLKEELDPLKVSCLETLGFSAAG FT VAGPENRTCLGQKALWPACLHGSSTLAVCQTHLKS" FT CDS complement(join(36805330..36805429,36822743..36822819, FT 36827940..36827993,36828182..36828280,36857606..36857614)) FT /locus_tag="RP11-251J8.1-001" FT /standard_name="OTTHUMP00000018256" FT /product="novel protein" FT /note="match: proteins: Tr:Q9H1T4" FT /protein_id="CAC17478.1" FT /translation="MPVESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNER FT RTYLAEMSQGSGLHQVSKRQQVDQLPRMQENLVKTGRYNPAKQKTVSAKRGPVKKITRP FT NHLPELHP" FT mRNA complement(join(36801311..36801518,36822743..36822819, FT 36827940..36827993,36828182..36828280,36857606..36857646, FT 36857729..36857839,36871774..36871961)) FT /locus_tag="RP11-251J8.1-002" FT /product="novel protein" FT /note="match: ESTs: Em:AA293855 Em:AA339260 Em:AA861485 FT Em:AI023533 Em:AI636904" FT mRNA complement(join(36805215..36805429,36822743..36822819, FT 36827940..36827993,36828182..36828280,36857606..36857646, FT 36857729..36857839,36871774..36871961)) FT /locus_tag="RP11-251J8.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA293855 Em:AA339260 Em:AA398348 FT Em:AI028190" FT mRNA complement(join(36822753..36822819,36827940..36827993, FT 36828182..36828280,36848439..36848664,36857606..36857646, FT 36857729..36857839,36871774..36871977)) FT /locus_tag="RP11-251J8.1-004" FT /product="novel protein" FT /note="match: ESTs: Em:BI830751.1" FT mRNA complement(join(36822727..36822819,36857729..36857839, FT 36871774..36871973)) FT /locus_tag="RP11-251J8.1-006" FT /product="novel protein" FT /note="match: ESTs: Em:AL707893.1" FT mRNA complement(join(36822739..36822819,36827940..36827993, FT 36828182..36828280,36857729..36857839,36871774..36871969)) FT /locus_tag="RP11-251J8.1-007" FT /product="novel protein" FT /note="match: ESTs: Em:BI464535.1" FT mRNA complement(join(36854194..36855397,36857606..36857646, FT 36857729..36857839,36869915..36869994,36871774..36871969)) FT /locus_tag="RP11-251J8.1-008" FT /product="novel protein" FT /note="match: ESTs: Em:BI829881.1" FT /note="match: cDNAs: Em:BC013944.1" FT mRNA complement(join(36856965..36857543,36857729..36857835, FT 36871774..36871974)) FT /locus_tag="RP11-251J8.1-005" FT /product="novel protein" FT /note="match: ESTs: Em:AL524810.1" FT misc_feature 36874462 FT /note="Clone_left_end: RP11-220O1" FT polyA_site complement(36875775) FT polyA_signal complement(36875795..36875800) FT polyA_site complement(36877156) FT polyA_signal complement(36877177..36877182) FT polyA_site complement(36877739) FT polyA_signal complement(36877755..36877760) FT mRNA complement(join(36878588..36878769,36882556..36882581, FT 36886282..36886372,36886456..36886548)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-005" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: ESTs: Em:BM690313.1" FT mRNA complement(join(36878459..36878769,36886282..36886372, FT 36886456..36886721)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-006" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: ESTs: Em:BG566062.1" FT mRNA complement(join(36886279..36886372,36886456..36886614, FT 36888105..36888219,36888364..36888578)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-007" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: ESTs: Em:BG740782.1" FT mRNA complement(join(36878594..36878769,36886282..36886372, FT 36886456..36886614,36888359..36888558,36900712..36900760)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-008" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: ESTs: Em:AV727623.1" FT CDS complement(join(36878502..36878769,36886282..36886372, FT 36886456..36886614,36888364..36888558,36900712..36900835, FT 36903499..36903654,36905536..36905733,36909158..36909967)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-002" FT /standard_name="OTTHUMP00000018254" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: proteins: Sw:Q8N0X7.1" FT /protein_id="CAC17479.1" FT /translation="MEQEPQNGEPAEIKIIREAYKKAFLFVNKGLNTDELGQKEEAKNY FT YKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEKGLATSLQ FT NDLQEVPKLYPEFPPKDMCEKLPEPQSFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPS FT QSCPAEAPPAYTPQAAEGHYTVSYGTDSGEFSSVGEEFYRNHSQPPPLETLGLDADELI FT LIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDTVLNRPPGFLQVCDWLYPLVPD FT RSPVLKCTAGAYMFPDTMLQAAGCFVGVVLSSELPEDDRELFEDLLRQMSDLRLQANWN FT RAEEENEFQIPGRTRPSSDQLKEASGTDVKQLDQGNKDVRHKGKRGKRAKDTSSEEVNL FT SHIVPCEPVPEEKPKELPEWSEKVAHNILSGASWVSWGLVKGAEITGKAIQKGASKLRE FT RIQPEEKPVEVSPAVTKGLYIAKQATGGAAKVSQFLVDGVCTVANCVGKELAPHVKKHG FT SKLVPESLKKDKDGKSPLDGAMVVAASSVQGFSTVWQGLECAAKCIVNNVSAETVQTVR FT YKYGYNAGEATHHAVDSAVNVGVTAYNINNIGIKAMVKKTATQTGHTLLEDYQIVDNSQ FT RENQEGAANVNVRGEKDEQTKEVKEAKKKDK" FT mRNA complement(join(36903498..36903654,36905536..36905733, FT 36909158..36909318)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-001" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: ESTs: Em:AW239374.1" FT mRNA complement(join(36892632..36892703,36902659..36902838, FT 36909725..36910495)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-010" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: ESTs: Em:BI828072.1" FT /note="match: cDNAs: Em:BC026284.1" FT mRNA complement(join(36909718..36909969,36919662..36919771)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-009" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: ESTs: Em:BQ188481.1" FT mRNA complement(join(36875775..36878769,36886282..36886372, FT 36886456..36886614,36888364..36888558,36900712..36900835, FT 36903499..36903654,36905536..36905733,36909158..36909969, FT 36920362..36920420)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-002" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: ESTs: Em:AU141085.1 Em:BG571910.1 FT Em:BG748157.1 Em:BX431225.2 Em:DB001312.1" FT /note="match: cDNAs: Em:AB011182.1 Em:AY123329.1 FT Em:BC047083.1 Em:BX648004.1" FT mRNA complement(join(36900060..36900835,36903499..36903654, FT 36905536..36905733,36909158..36909969,36920362..36920420)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-003" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: cDNAs: Em:AK001949" FT mRNA join(36920568..36920644,36939637..36939741, FT 36939867..36939980,36942335..36942480,36943625..36943738) FT /locus_tag="RP11-251J8.3-003" FT /product="novel protein" FT /note="match: ESTs: Em:BF732820.1" FT mRNA join(36920569..36920644,36939637..36939741, FT 36939867..36939980,36942335..36942547) FT /locus_tag="RP11-251J8.3-002" FT /product="novel protein" FT /note="match: ESTs: Em:AI220517.1 Em:AW072020.1 FT Em:BF447603.1 Em:BX117912.1" FT mRNA join(36920569..36920644,36934791..36934877, FT 36939637..36939741,36939867..36939980,36942335..36942480, FT 36943625..36943662) FT /locus_tag="RP11-251J8.3-001" FT /product="novel protein" FT /note="match: ESTs: Em:AW292824.1" FT mRNA complement(join(36909370..36909969,36920719..36920914)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-011" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: ESTs: Em:BG748157.1" FT CDS join(36939724..36939741,36939867..36939980, FT 36942335..36942361) FT /locus_tag="RP11-251J8.3-002" FT /standard_name="OTTHUMP00000195706" FT /product="novel protein" FT /protein_id="CAC17482.1" FT /translation="MKDIGHLQHLAQRLQWNRRAVNICGMHGWTKDLSPHSRMPSMLEH FT VKHYMSC" FT polyA_signal 36942523..36942528 FT polyA_site 36942547 FT mRNA complement(join(36877856..36878769,36886282..36886372, FT 36886456..36886614,36888364..36888558,36900712..36900835, FT 36903499..36903654,36905536..36905733,36909158..36909245, FT 36909708..36909969,36944226..36944290)) FT /gene="SPG20" FT /locus_tag="RP11-251J8.4-004" FT /product="spastic paraplegia 20, spartin (Troyer syndrome)" FT /note="match: cDNAs: Em:AK057764.1" FT misc_feature 36945937..36945940 FT /note="IS2 element removed from here" FT misc_feature 36952331 FT /note="Clone_right_end: RP11-251J8" FT misc_feature 36952432..37025745 FT /note="annotated region of clone" FT misc_feature 36981173..36981182 FT /note="Assembly confirmed by restriction digest data" FT misc_feature 36984911..36984917 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA join(37006040..37006303,37007170..37007358, FT 37011766..37011848) FT /gene="CCNA1" FT /locus_tag="RP11-220O1.1-002" FT /product="cyclin A1" FT /note="match: ESTs: Em:BG722580.1" FT mRNA join(37006495..37006866,37007170..37007358, FT 37011766..37012012,37012204..37012328,37012781..37013004, FT 37014116..37014320,37015255..37015368,37016308..37016441, FT 37016751..37017019) FT /gene="CCNA1" FT /locus_tag="RP11-220O1.1-001" FT /product="cyclin A1" FT /note="match: ESTs: Em:BM714028.1 Em:BP203065.1 FT Em:CD617693.1 Em:DA682493.1" FT /note="match: cDNAs: Em:BC035479.1 Em:BC036346.1 FT Em:CR616879.1 Em:U66838.1" FT CDS join(37006759..37006866,37007170..37007358, FT 37011766..37012012,37012204..37012328,37012781..37013004, FT 37014116..37014320,37015255..37015368,37016308..37016441, FT 37016751..37016802) FT /gene="CCNA1" FT /locus_tag="RP11-220O1.1-001" FT /standard_name="OTTHUMP00000018259" FT /product="cyclin A1" FT /note="match: proteins: Sw:P78396.1 Tr:Q5T3V0.1" FT /protein_id="CAI12728.1" FT /translation="METGFPAIMYPGSFIGGWGEEYLSWEGPGLPDFVFQQQPVESEAM FT HCSNPKSGVVLATVARGPDACQILTRAPLGQDPPQRTVLGLLTANGQYRRTCGQGITRI FT RCYSGSENAFPPAGKKALPDCGVQEPPKQGFDIYMDELEQGDRDSCSVREGMAFEDVYE FT VDTGTLKSDLHFLLDFNTVSPMLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREA FT EIRHRPKAHYMKKQPDITEGMRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSV FT LRGKLQLVGTAAMLLASKYEEIYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLT FT VPTTNQFLLQYLRRQGVCVRTENLAKYVAELSLLEADPFLKYLPSLIAAAAFCLANYTV FT NKHFWPETLAAFTGYSLSEIVPCLSELHKAYLDIPHRPQQAIREKYKASKYLCVSLMEP FT PAVLLLQ" FT mRNA join(37011979..37012012,37012204..37012309, FT 37015255..37015368,37016308..37016441,37016751..37017006) FT /gene="CCNA1" FT /locus_tag="RP11-220O1.1-003" FT /product="cyclin A1" FT /note="match: ESTs: Em:AI637969.1" FT polyA_signal 37016987..37016992 FT polyA_site 37017019 FT misc_feature 37021746 FT /note="Clone_left_end: RP11-56M2" FT misc_feature 37025746..37185789 FT /note="annotated region of clone" FT misc_feature 37051723 FT /note="Clone_right_end: RP11-220O1" FT CDS complement(37064215..>37064578) FT /pseudo FT /locus_tag="RP11-56M2.1-001" FT /product="histone pseudogene" FT /note="match: proteins: Sw:O04848 Sw:O65759 Sw:P02273 FT Sw:P02274 Sw:P0C0S9 Sw:P20671 Sw:P35064 Sw:P35065 Sw:Q6GSS7 FT Sw:Q6GSS7 Sw:Q96KK5 Sw:Q9S9K7 Tr:P22752 Tr:P28001 Tr:Q64426 FT Tr:Q78DY0 Tr:Q78DY2 Tr:Q92069 Tr:Q98TZ9 Tr:Q99878 FT Tr:Q9S994" FT misc_feature 37106982..37107339 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 37164780 FT /note="Clone_left_end: RP11-16L6" FT misc_feature 37183789 FT /note="Clone_right_end: RP11-56M2" FT misc_feature 37185790..37341119 FT /note="annotated region of clone" FT misc_feature 37247755..37247796 FT /note="Sequence from AC068070 sequenced by Stanford DNA FT Sequencing and Technology Development Center" FT mRNA join(37248049..37248321,37269043..37271976) FT /gene="C13orf36" FT /locus_tag="RP11-16L6.1-001" FT /product="chromosome 13 open reading frame 36" FT /note="match: ESTs: Em:BI544475.1 Em:BI549127.1" FT /note="match: cDNAs: Em:BC036540.2" FT CDS 37269216..37269539 FT /gene="C13orf36" FT /locus_tag="RP11-16L6.1-001" FT /standard_name="OTTHUMP00000178564" FT /product="chromosome 13 open reading frame 36" FT /note="match: proteins: Tr:Q8CD78.1 Tr:Q8N469.1" FT /protein_id="CAM13388.1" FT /translation="MSEPDTSSGFSGSVENGTFLELFPTSLSTSVDPSSGHLSNVYIYV FT SIFLSLLAFLLLLLIIALQRLKNIISSSSSYPEYPSDAGSSFTNLEVCSISSQRSTFSN FT LSS" FT polyA_signal 37271948..37271953 FT polyA_signal 37271952..37271957 FT polyA_site 37271976 FT CDS 37314178..37315060 FT /pseudo FT /locus_tag="RP11-16L6.2-001" FT /product="glyceraldehyde-3-phosphate dehydrogenase (GAPDH) FT pseudogene" FT /note="match: proteins: Sw:P00355 Sw:P00356 Sw:P04406 FT Sw:P04797 Sw:P10096 Sw:P16858 Sw:P17729 Sw:P46406 Sw:P56649 FT Sw:P80534 Sw:Q9N2D5 Tr:Q8WNY0 Tr:Q90Z48 Tr:Q90ZF1 Tr:Q9NA02 FT Tr:Q9QWU4" FT CDS complement(37316015..37316602) FT /pseudo FT /locus_tag="RP11-16L6.3-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q96EI5 Sw:Q96EI5 Sw:Q96EI5 FT Sw:Q96EI5 Sw:Q9H3H9" FT misc_feature 37324132 FT /note="Clone_left_end: RP11-197L7" FT misc_feature 37341019 FT /note="Clone_right_end: RP11-16L6" FT misc_feature 37341120..37417193 FT /note="annotated region of clone" FT misc_feature 37344971..37344993 FT /note="Sequence from overlapping clone bA297M16. Assembly FT confirmed by restriction digest" FT CDS 37368621..37369187 FT /pseudo FT /locus_tag="RP11-197L7.2-001" FT /product="ADP-ribosylation factor-like 2 binding protein FT (ARL2BP) pseudogene" FT /note="match: proteins: Tr:Q9CQW6 Tr:Q9D385 Tr:Q9D385 FT Tr:Q9Y2Y0" FT polyA_signal 37371118..37371123 FT polyA_site 37371129 FT mRNA join(37393361..37394094,37399565..37399672, FT 37401780..37403241) FT /gene="RFXAP" FT /locus_tag="RP11-197L7.1-001" FT /product="regulatory factor X-associated protein" FT /note="match: ESTs: Em:AI672655.1 Em:BM769875.1" FT /note="match: cDNAs: Em:BC026088.1" FT CDS join(37393495..37394094,37399565..37399672, FT 37401780..37401890) FT /gene="RFXAP" FT /locus_tag="RP11-197L7.1-001" FT /standard_name="OTTHUMP00000018260" FT /product="regulatory factor X-associated protein" FT /note="match: proteins: Sw:O00287.1 Tr:Q5VZM6.1 FT Tr:Q8TC40.1" FT /protein_id="CAH71159.1" FT /translation="MEAQGVAEGAGPGAASGVPHPAALAPAAAPTLAPASVAAAASQFT FT LLVMQPCAGQDEAAAPGGSVGAGKPVRYLCEGAGDGEEEAGEDEADLLDTSDPPGGGES FT AASLEDLEDEETHSGGEGSSGGARRRGSGGGSMSKTCTYEGCSETTSQVAKQRKPWMCK FT KHRNKMYKDKYKKKKSDQALNCGGTASTGSAGNVKLEESADNILSIVKQRTGSFGDRPA FT RPTLLEQVLNQKRLSLLRSPEVVQFLQKQQQLLNQQVLEQRQQQFPGTSM" FT mRNA join(37399563..37399672,37401780..37401886, FT 37402473..37402495,37402941..37403234) FT /gene="RFXAP" FT /locus_tag="RP11-197L7.1-002" FT /product="regulatory factor X-associated protein" FT /note="match: ESTs: Em:AW104577.1" FT polyA_signal 37403216..37403221 FT polyA_site 37403241 FT misc_feature 37416994 FT /note="Clone_left_end: RP11-421P11" FT misc_feature 37417194..37612125 FT /note="annotated region of clone" FT polyA_site complement(37418968) FT polyA_signal complement(37418984..37418989) FT mRNA join(37423503..37423899,37424077..37424183) FT /locus_tag="RP11-421P11.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI122875.1" FT CDS complement(join(37583846..37583946,37586329..37586434, FT 37591382..37591501,37593479..37593534,37595585..37595739, FT 37596148..37596217,37598172..37598330,37598477..37598579, FT 37599457..37599574,37600341..37600373,37600927..37600953, FT 37602285..37602442,37603902..37603973,37605704..37605760, FT 37605876..37606032,37607586..37607725, FT AL391383.15:4417..4470,AL391383.15:4588..4704, FT AL391383.15:8090..8193,AL391383.15:9259..9388, FT AL391383.15:11547..11613,AL391383.15:11890..11948, FT AL391383.15:12576..12611,AL391383.15:15500..15502)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-001" FT /standard_name="OTTHUMP00000018265" FT /product="family with sequence similarity 48, member A" FT /protein_id="CAI14005.1" FT /translation="MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYI FT EECEKEPEVKQKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIR FT LPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSR FT HILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANR FT LLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYD FT LKISKAGNCVDMWKRSPCNLAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVF FT ECEAGTQYQKTKLTILQSLGDPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGS FT KTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGK FT GVKHRPPPIKLPSSSGNSSSGNYFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVS FT MLSPAALSPASSSQRTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAIT FT PAGINLSGLLPSGGLLPNALPSAMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNT FT LQQQQQQLSQFTPQQPQQPTTCSPQQPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSF FT MQSQAAAVAILAASNGYGSSSSTNSSATSSSAYRQPVKK" FT mRNA complement(join(37583453..37583946,37586329..37586434, FT 37591382..37591501,37593479..37593534,37595585..37595739, FT 37596148..37596217,37598172..37598330,37598477..37598579, FT 37599457..37599574,37600341..37600373,37600927..37600953, FT 37602285..37602442,37603902..37603973,37605704..37605760, FT 37605876..37606032,37607586..37607725, FT AL391383.15:4417..4470,AL391383.15:4588..4704, FT AL391383.15:8090..8193,AL391383.15:9259..9388, FT AL391383.15:11547..11613,AL391383.15:11890..11948, FT AL391383.15:12576..12611,AL391383.15:15500..15595, FT AL391383.15:23571..23725)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-001" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:AL526315.3 Em:BM792476.1 FT Em:BM927481.1 Em:BQ424877.1 Em:CN344495.1 Em:CR743389.1 FT Em:CR977576.1 Em:DA593337.1 Em:DA709445.1 Em:DR158475.1" FT /note="match: cDNAs: Em:AF093250.1 Em:AF139179 Em:AK027554 FT Em:BC030686" FT mRNA complement(join(37418968..37422956,37427556..37427812, FT 37439674..37439895,37441410..37441520,37446795..37447052, FT 37453415..37453966)) FT /gene="SMAD9" FT /locus_tag="RP11-421P11.9-002" FT /product="SMAD family member 9" FT /note="match: ESTs: Em:AV750843.1 Em:BE252922.1 FT Em:BX506816.1" FT /note="match: cDNAs: Em:BC104760.1 Em:BC104762.1 FT Em:D83760.1" FT CDS complement(join(37422813..37422956,37427556..37427812, FT 37439674..37439895,37441410..37441520,37446795..37447052, FT 37453415..37453826)) FT /gene="SMAD9" FT /locus_tag="RP11-421P11.9-002" FT /standard_name="OTTHUMP00000018262" FT /product="SMAD family member 9" FT /note="match: proteins: Sw:O15198.1 Tr:Q5TBA1.1" FT /protein_id="CAI14007.1" FT /translation="MHSTTPISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKL FT KKKKGAMDELERALSCPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSH FT HELKPLECCEFPFGSKQKEVCINPYHYRRVETPVLPPVLVPRHSEYNPQLSLLAKFRSA FT SLHSEPLMPHNATYPDSFQQPPCSALPPSPSHAFSQSPCTASYPHSPGSPSEPESPYQH FT SVDTPPLPYHATEASETQSGQPVDATADRHVVLSIPNGDFRPVCYEEPQHWCSVAYYEL FT NNRVGETFQASSRSVLIDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYY FT VGGEVYAECVSDSSIFVQSRNCNYQHGFHPATVCKIPSGCSLKVFNNQLFAQLLAQSVH FT HGFEVVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGS FT PHNPISSVS" FT CDS complement(join(37422813..37422956,37427556..37427812, FT 37439674..37439895,37446795..37447052,37453415..37453826)) FT /gene="SMAD9" FT /locus_tag="RP11-421P11.9-001" FT /standard_name="OTTHUMP00000178565" FT /product="SMAD family member 9" FT /note="match: proteins: Sw:Q9JIW5.2 Tr:Q3UVC6.1" FT /protein_id="CAM19158.1" FT /translation="MHSTTPISSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKL FT KKKKGAMDELERALSCPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSH FT HELKPLECCEFPFGSKQKEVCINPYHYRRVETPVLPPVLVPRHSEYNPQLSLLAKFRSA FT SLHSEPLMPHNATYPDSFQQPPCSALPPSPSHAFSQSPCTASYPHSPGSPSEPESPYQH FT SDFRPVCYEEPQHWCSVAYYELNNRVGETFQASSRSVLIDGFTDPSNNRNRFCLGLLSN FT VNRNSTIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQSRNCNYQHGFHPATVCKIP FT SGCSLKVFNNQLFAQLLAQSVHHGFEVVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPC FT WIEIHLHGPLQWLDKVLTQMGSPHNPISSVS" FT misc_feature 37494093..37494182 FT /note="Single clone region. assembly confirmed by FT restriction digest data" FT mRNA complement(join(37418968..37422956,37427556..37427812, FT 37439674..37439895,37446795..37447052,37453415..37454012, FT 37494253..37494375)) FT /gene="SMAD9" FT /locus_tag="RP11-421P11.9-001" FT /product="SMAD family member 9" FT /note="match: ESTs: Em:BG388323.1" FT /note="match: cDNAs: Em:BC011559.1 Em:BC067766.1" FT mRNA complement(join(37453599..37454012,37494772..37494902)) FT /gene="SMAD9" FT /locus_tag="RP11-421P11.9-003" FT /product="SMAD family member 9" FT /note="match: ESTs: Em:BG390380.1" FT CDS 37496676..37497045 FT /pseudo FT /locus_tag="RP11-421P11.7-001" FT /product="MAP2K1IP1(mitogen-activated protein kinase kinase FT 1 interacting protein 1) pseudogene" FT /note="match: proteins: Sw:Q9UHA4 Sw:Q9VJD2" FT CDS complement(join(37500736..37500958,37501266..37501310)) FT /pseudo FT /locus_tag="RP11-421P11.8-001" FT /product="RPL29 (60S ribosomal protein L29) pseudogene" FT /note="match: proteins: Sw:P25886 Sw:P47914 Sw:P47915 FT Sw:Q95281 Tr:Q5M8M8" FT CDS complement(37512537..37513631) FT /pseudo FT /locus_tag="RP11-421P11.6-001" FT /product="eukaryotic initiation factor pseudogene" FT /note="match: proteins: Sw:P60842" FT misc_feature 37517456 FT /note="Clone_right_end: RP11-197L7" FT polyA_site complement(37523967) FT polyA_signal complement(37523990..37523995) FT mRNA complement(join(37523986..37524194,37526651..37527006)) FT /gene="ALG5" FT /locus_tag="RP11-421P11.2-002" FT /product="asparagine-linked glycosylation 5 homolog (S. FT cerevisiae, dolichyl-phosphate beta-glucosyltransferase)" FT /note="match: ESTs: Em:BE502329.1" FT misc_feature 37532728 FT /note="Clone_left_end: RP11-532O21" FT mRNA complement(join(37524131..37524194,37526651..37526736, FT 37539712..37539863,37541809..37542193)) FT /gene="ALG5" FT /locus_tag="RP11-421P11.2-003" FT /product="asparagine-linked glycosylation 5 homolog (S. FT cerevisiae, dolichyl-phosphate beta-glucosyltransferase)" FT /note="match: ESTs: Em:BM693625.1" FT mRNA join(37572953..37573331,37576410..37576446, FT 37576625..37576688,37577071..37577144,37578653..37578698, FT 37580057..37580162,37580252..37580290) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-004" FT /product="exosome component 8" FT /note="match: ESTs: Em:BI827132.1" FT mRNA complement(join(37523967..37524194,37526651..37526736, FT 37539712..37539863,37546114..37546173,37559764..37559877, FT 37563621..37563713,37567741..37567809,37569126..37569172, FT 37569562..37569733,37573372..37573504)) FT /gene="ALG5" FT /locus_tag="RP11-421P11.2-001" FT /product="asparagine-linked glycosylation 5 homolog (S. FT cerevisiae, dolichyl-phosphate beta-glucosyltransferase)" FT /note="match: ESTs: Em:AL525209.3 Em:BM818909.1 FT Em:BP246765.1" FT /note="match: cDNAs: Em:AF102850.1 Em:AF161498.1 FT Em:BC012531.1" FT CDS complement(join(37524079..37524194,37526651..37526736, FT 37539712..37539863,37546114..37546173,37559764..37559877, FT 37563621..37563713,37567741..37567809,37569126..37569172, FT 37569562..37569733,37573372..37573437)) FT /gene="ALG5" FT /locus_tag="RP11-421P11.2-001" FT /standard_name="OTTHUMP00000018263" FT /product="asparagine-linked glycosylation 5 homolog (S. FT cerevisiae, dolichyl-phosphate beta-glucosyltransferase)" FT /note="match: proteins: Sw:Q9Y673.1 Tr:Q4QQS6.1 Tr:Q5TBA6.1 FT Tr:Q9HC03.1" FT /protein_id="CAI14011.1" FT /translation="MAPLLLQLAVLGAALAAAALVLISIVAFTTATKMPALHRHEEEKF FT FLNAKGQKETLPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALSYLEKRQKRDPAFTYE FT VIVVDDGSKDQTSKVAFKYCQKYGSDKVRVITLVKNRGKGGAIRMGIFSSRGEKILMAD FT ADGATKFPDVEKLEKGLNDLQPWPNQMAIACGSRAHLEKESIAQRSYFRTLLMYGFHFL FT VWFLCVKGIRDTQCGFKLFTREAASRTFSSLHVERWAFDVELLYIAQFFKIPIAEIAVN FT WTEIEGSKLVPFWSWLQMGKDLLFIRLRYLTGAWRLEQTRKMN" FT mRNA complement(join(37559786..37559877,37563621..37563713, FT 37567741..37567809,37569562..37569733,37574069..37574398)) FT /gene="ALG5" FT /locus_tag="RP11-421P11.2-004" FT /product="asparagine-linked glycosylation 5 homolog (S. FT cerevisiae, dolichyl-phosphate beta-glucosyltransferase)" FT /note="match: ESTs: Em:BG614786.1" FT mRNA join(37574678..37574959,37576410..37576446, FT 37576625..37576688,37577071..37577144,37578653..37578698, FT 37580057..37580162,37580252..37580297,37581112..37581208, FT 37582194..37582314,37582866..37582976,37583328..37583538) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-003" FT /product="exosome component 8" FT /note="match: ESTs: Em:BM697343.1" FT /note="match: cDNAs: Em:AF025438 Em:AF279901 Em:AK009584 FT Em:BC016142 Em:BC020773" FT mRNA join(37574920..37574959,37576625..37576688, FT 37577071..37577144,37578653..37578698,37580057..37580162, FT 37580252..37580297,37581112..37581208,37582199..37582314, FT 37582866..37582970) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-008" FT /product="exosome component 8" FT /note="match: ESTs: Em:BQ428670.1" FT mRNA join(37574923..37574959,37575886..37575938, FT 37576410..37576446,37576625..37576688,37577071..37577144, FT 37578653..37578698,37580057..37580162,37580252..37580297, FT 37581112..37581208,37582194..37582314,37582866..37582922) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-005" FT /product="exosome component 8" FT /note="match: ESTs: Em:BG501818.1" FT mRNA join(37574923..37574959,37576625..37576688, FT 37577071..37577144,37578614..37578698,37580057..37580162, FT 37580252..37580297,37581112..37581208,37582194..37582314, FT 37582866..37582936) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-010" FT /product="exosome component 8" FT /note="match: ESTs: Em:BG540700.1" FT mRNA join(37574924..37574959,37576410..37576446, FT 37576625..37576688,37577071..37577345) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-007" FT /product="exosome component 8" FT /note="match: ESTs: Em:AV762968.1" FT mRNA join(37574924..37574959,37576410..37576446, FT 37576625..37576688,37577071..37578698,37580094..37580162, FT 37580252..37580297,37581112..37581208,37582194..37582314, FT 37582866..37582971,37583328..37583538) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-002" FT /product="exosome component 8" FT /note="match: cDNAs: Em:AL050353.1" FT CDS join(37574943..37574959,37576410..37576446, FT 37576625..37576688,37577071..37577144,37578653..37578698, FT 37580057..37580162,37580252..37580297,37581112..37581208, FT 37582194..37582314,37582866..37582976,37583328..37583436) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-003" FT /standard_name="OTTHUMP00000018264" FT /product="exosome component 8" FT /note="match: proteins: Sw:Q96B26 Sw:Q9D753" FT /protein_id="CAI14013.1" FT /translation="MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTA FT DGSALVKLGNTTVICGVKAEFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQV FT ASQFIADVIENSQIIQKEDLCISPGKLVWVLYCDLICLDYDGNILDACTFALLAALKNV FT QLPEVTINEETALAEVNLKKKSYLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTL FT TIVMDEEGKLCCLHKPGIGLTGAKLQDCMSRAVTRHKEVKKLMDEVIKSMKPK" FT mRNA join(37576410..37576446,37576625..37576688, FT 37577071..37577144,37577632..37577654,37578653..37578662) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-006" FT /product="exosome component 8" FT /note="match: ESTs: Em:BF173106.1" FT mRNA join(37578355..37578698,37580057..37580162, FT 37580252..37580297,37581112..37581208,37582194..37582314, FT 37582866..37582969) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-009" FT /product="exosome component 8" FT /note="match: ESTs: Em:BG697677.1" FT mRNA join(37578512..37578698,37580094..37580162, FT 37580252..37580297,37581112..37581208,37582194..37582220) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-011" FT /product="exosome component 8" FT /note="match: ESTs: Em:H30501.1" FT mRNA join(37581115..37581208,37583321..37583750) FT /gene="EXOSC8" FT /locus_tag="RP11-421P11.3-001" FT /product="exosome component 8" FT /note="match: ESTs: Em:BE675929.1" FT polyA_site complement(37583453) FT polyA_signal complement(37583501..37583506) FT polyA_signal 37583510..37583515 FT polyA_site 37583538 FT mRNA complement(join(37583453..37583946,37586329..37586434, FT 37591382..37591501,37593479..37593534,37595585..37595739, FT 37596148..37597106)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-010" FT /product="family with sequence similarity 48, member A" FT /note="match: cDNAs: Em:AK056121.1" FT mRNA complement(join(37596369..37596454,37598172..37598332)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-012" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:AI630193.1" FT mRNA complement(join(37596936..37597181,37598172..37598330, FT 37598477..37598579,37599457..37599575)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-013" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:BM504995.1" FT mRNA complement(join(37583631..37583946,37584689..37584792, FT 37586329..37586434,37591382..37591465,37593479..37593534, FT 37595585..37595739,37596148..37596217,37598477..37598579, FT 37599457..37599574,37600341..37600374)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-009" FT /product="family with sequence similarity 48, member A" FT /note="match: cDNAs: Em:AK026091.1" FT mRNA complement(join(37598271..37598330,37599328..37599574, FT 37600341..37600373,37600927..37600953,37602285..37602445)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-015" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:AW995167.1" FT mRNA complement(join(37597686..37598330,37598477..37598579, FT 37599457..37599574,37600341..37600373,37600927..37600953, FT 37602285..37602442,37603902..37603973,37605704..37605760, FT 37605876..37606032,37607586..37607728)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-011" FT /product="family with sequence similarity 48, member A" FT /note="match: cDNAs: Em:AK027554.1" FT mRNA complement(join(37598288..37598330,37598477..37598579, FT 37600341..37600373,37600927..37600953,37602285..37602442, FT 37605704..37605760,37605876..37606032,37607586..37607616)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-014" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:BM847901.1" FT misc_feature 37612025 FT /note="Clone_right_end: RP11-421P11" FT misc_feature 37612126..37709046 FT /note="annotated region of clone" FT polyA_site complement(37612172) FT polyA_signal complement(37612198..37612203) FT misc_feature 37615947..37615956 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 37620792..37621063 FT /note="Sequence from overlapping clones RP11-484D5 FT (AL356107) and RP11-676B18 (AL356274). Assembly confirmed FT by restriction digest" FT mRNA complement(join(37614548..37614595,37614713..37614829, FT 37618215..37618318,37619384..37619513,37621672..37621738)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-008" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:AJ451672.1" FT mRNA complement(join(37614541..37614595,37614713..37614829, FT 37618215..37618318,37621672..37621738,37622015..37622073, FT 37622701..37622737)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-005" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:AJ452277.1" FT CDS complement(join(AL138706.9:166753..166853, FT AL138706.9:169236..169341,AL138706.9:174289..174408, FT AL138706.9:176386..176441,AL138706.9:178492..178646, FT AL138706.9:179055..179124,AL138706.9:181079..181237, FT AL138706.9:181384..181486,AL138706.9:182364..182481, FT AL138706.9:183248..183280,AL138706.9:183834..183860, FT AL138706.9:185192..185349,AL138706.9:186809..186880, FT AL138706.9:188611..188667,AL138706.9:188783..188939, FT AL138706.9:190493..190632,37614542..37614595, FT 37614713..37614829,37618215..37618318,37619384..37619513, FT 37621672..37621738,37622015..37622073,37622701..37622736, FT 37625625..37625627)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-001" FT /standard_name="OTTHUMP00000018265" FT /product="family with sequence similarity 48, member A" FT /protein_id="CAI15193.1" FT /translation="MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLYI FT EECEKEPEVKQKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIR FT LPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSR FT HILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANR FT LLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYD FT LKISKAGNCVDMWKRSPCNLAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVF FT ECEAGTQYQKTKLTILQSLGDPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGS FT KTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGK FT GVKHRPPPIKLPSSSGNSSSGNYFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVS FT MLSPAALSPASSSQRTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPMLGCNTGAIT FT PAGINLSGLLPSGGLLPNALPSAMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNT FT LQQQQQQLSQFTPQQPQQPTTCSPQQPGEQGSEQGSTSQEQALSAQQAAVINLTGVGSF FT MQSQAAAVAILAASNGYGSSSSTNSSATSSSAYRQPVKK" FT mRNA complement(join(37622039..37622073,37622701..37622736, FT 37625625..37625720,37628272..37628433,37633332..37633611)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-006" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:AL079697.2" FT mRNA complement(join(37614785..37614829,37618221..37618318, FT 37619384..37619510,37621672..37621738,37622015..37622073, FT 37622701..37622736,37625625..37625720,37633617..37633774)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-007" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:BG718850.1" FT mRNA complement(join(37612172..37614595,37614713..37614829, FT 37618215..37618318,37621672..37621738,37622015..37622073, FT 37625625..37625720,37633696..37633776)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-002" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:AI090894 Em:BF082726 Em:BG094416 FT Em:BI651069 Em:BM538490" FT /note="match: cDNAs: Em:AF445026" FT mRNA complement(join(37614554..37614595,37614713..37614827, FT 37618215..37618318,37619384..37619510,37621483..37621545, FT 37621672..37621738,37622015..37622073,37622701..37622736, FT 37625625..37625720,37633696..37633776)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-003" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:BM926756.1" FT mRNA complement(join(37614541..37614595,37614713..37614829, FT 37618215..37618318,37619384..37619510,37621483..37621545, FT 37621672..37621738,37622015..37622073,37625625..37625720, FT 37633696..37633776)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-004" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:BI838737.1" FT mRNA complement(join(AL138706.9:166360..166853, FT AL138706.9:169236..169341,AL138706.9:174289..174408, FT AL138706.9:176386..176441,AL138706.9:178492..178646, FT AL138706.9:179055..179124,AL138706.9:181079..181237, FT AL138706.9:181384..181486,AL138706.9:182364..182481, FT AL138706.9:183248..183280,AL138706.9:183834..183860, FT AL138706.9:185192..185349,AL138706.9:186809..186880, FT AL138706.9:188611..188667,AL138706.9:188783..188939, FT AL138706.9:190493..190632,37614542..37614595, FT 37614713..37614829,37618215..37618318,37619384..37619513, FT 37621672..37621738,37622015..37622073,37622701..37622736, FT 37625625..37625720,37633696..37633850)) FT /gene="FAM48A" FT /locus_tag="RP11-421P11.10-001" FT /product="family with sequence similarity 48, member A" FT /note="match: ESTs: Em:AL526315.3 Em:BM792476.1 FT Em:BM927481.1 Em:BQ424877.1 Em:CN344495.1 Em:CR743389.1 FT Em:CR977576.1 Em:DA593337.1 Em:DA709445.1 Em:DR158475.1" FT /note="match: cDNAs: Em:AF093250.1 Em:AF139179 Em:AK027554 FT Em:BC030686" FT misc_feature 37649158..37649251 FT /note="Sequence from overlapping clone RP11-676B18 FT (AL356274). Assembly confirmed by restriction digest" FT misc_feature 37654998..37655270 FT /note="Sequence from overlapping clone RP11-676B18 FT (AL356274). Assembly confirmed by restriction digest" FT polyA_site complement(37677396) FT mRNA complement(37677396..37679801) FT /gene="CSNK1A1L" FT /locus_tag="RP11-532O21.2-001" FT /product="casein kinase 1, alpha 1-like" FT /note="match: ESTs: Em:BQ223150.1 Em:CV024576.1" FT /note="match: cDNAs: Em:BC028723.2" FT polyA_signal complement(37677410..37677415) FT CDS complement(37678380..37679393) FT /gene="CSNK1A1L" FT /locus_tag="RP11-532O21.2-001" FT /standard_name="OTTHUMP00000018267" FT /product="casein kinase 1, alpha 1-like" FT /note="match: proteins: Sw:P67962.1 Sw:P67963.1 Sw:Q8BK63.2 FT Sw:Q8N752.1 Tr:Q5T2N2.1" FT /protein_id="CAI15195.1" FT /translation="MTNNSGSKAELVVGGKYKLVRKIGSGSFGDVYLGITTTNGEDVAV FT KLESQKVKHPQLLYESKLYTILQGGVGIPHMHWYGQEKDNNVLVMDLLGPSLEDLFNFC FT SRRFTMKTVLMLADQMISRIEYVHTKNFLHRDIKPDNFLMGTGRHCNKLFLIDFGLAKK FT YRDNRTRQHIPYREDKHLIGTVRYASINAHLGIEQSRRDDMESLGYVFMYFNRTSLPWQ FT GLRAMTKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLF FT RILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTQTGKQTEKNKNNVKDN" FT misc_feature 37707046 FT /note="Clone_right_end: RP11-532O21" FT misc_feature 37752225..37752355 FT /note="Sequence from overlapping clone RP11-117O7 FT (AL160267). Assembly confirmed by restriction digest" FT misc_feature 37772140..37772194 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 37772544..37772570 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 37775672 FT /note="Clone_right_end: RP11-676B18" FT misc_feature 37780499..37960676 FT /note="annotated region of clone" FT CDS complement(37794997..37795383) FT /pseudo FT /locus_tag="RP11-495J3.1-001" FT /product="ribosomal protein S12 (RPS12) pseudogene" FT /note="match: proteins: Sw:P25398 Sw:P46405 Sw:P80455 FT Sw:P80455 Sw:Q9XHS0 Tr:Q6ZWZ6 Tr:Q6ZWZ6 Tr:Q6ZWZ6 Tr:Q76M58 FT Tr:Q76M58 Tr:Q76M58 Tr:Q962R7" FT misc_feature 37852597..37852670 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 37942876 FT /note="Clone_left_end: RP11-14O22" FT misc_feature 37958676 FT /note="Clone_right_end: RP11-495J3" FT misc_feature 37960677..38115660 FT /note="annotated region of clone" FT mRNA complement(join(38055604..38055864,38058422..38058530, FT 38058607..38058682,38058842..38058906)) FT /locus_tag="RP11-14O22.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA025782 Em:AA025943" FT misc_feature 38115560 FT /note="Clone_right_end: RP11-14O22" FT misc_feature 38115661..38155979 FT /note="annotated region of clone" FT mRNA complement(join(38136726..38137507,38138656..38138697, FT 38143437..38143520,38143881..38143958,38144717..38144806, FT 38145506..38145595,38148709..38148789,38151890..38151935, FT 38152981..38153048,38153156..38153258,38153366..38153496, FT 38153998..38154128,38154698..38154834, FT AL138679.11:2524..2672,AL138679.11:4127..4261, FT AL138679.11:4874..5086,AL138679.11:6297..6438, FT AL138679.11:6940..7086,AL138679.11:7980..8144, FT AL138679.11:10530..10687,AL138679.11:12258..12322, FT AL138679.11:17342..17440,AL138679.11:18766..19002)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-001" FT /product="periostin, osteoblast specific factor" FT /note="match: cDNAs: Em:D13666.1" FT /note="match: ESTs: Em:AU116857.1 Em:AU139611.1 FT Em:BF525659.1 Em:BP279867.1 Em:BY795054.2" FT CDS complement(join(38137470..38137507,38138656..38138697, FT 38143437..38143520,38143881..38143958,38144717..38144806, FT 38145506..38145595,38148709..38148789,38151890..38151935, FT 38152981..38153048,38153156..38153258,38153366..38153496, FT 38153998..38154128,38154698..38154834, FT AL138679.11:2524..2672,AL138679.11:4127..4261, FT AL138679.11:4874..5086,AL138679.11:6297..6438, FT AL138679.11:6940..7086,AL138679.11:7980..8144, FT AL138679.11:10530..10687,AL138679.11:12258..12322, FT AL138679.11:17342..17440,AL138679.11:18766..18884)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-001" FT /standard_name="OTTHUMP00000018268" FT /product="periostin, osteoblast specific factor" FT /note="match: proteins: Sw:Q15063 Sw:Q15063.2" FT /protein_id="CAH73568.1" FT /translation="MIPFLPMFSLLLLLIVNPINANNHYDKILAHSRIRGRDQGPNVCA FT LQQILGTKKKYFSTCKNWYKKSICGQKTTVLYECCPGYMRMEGMKGCPAVLPIDHVYGT FT LGIVGATTTQRYSDASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLN FT ALHSHMINKRMLTKDLKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQIATNGV FT VHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGHFTLFAPTNEAFEK FT LPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITV FT NGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQLGLASALRP FT DGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQILETIGGKQLR FT VFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDKRFSTFLSLLE FT AADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHLTPGVFIGKG FT FEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKLLYPADTPV FT GNDQLLEILNKLIKYIQIKFVRGSTFKEIPVTVYTTKIITKVVEPKIKVIEGSLQPIIK FT TEGPTLTKVKIEGEPEFRLIKEGETITEVIHGEPIIKKYTKIIDGVPVEITEKETREER FT IITGPEIKYTRISTGGGETEETLKKLLQEEVTKVTKFIEGGDGHLFEDEEIKRLLQGDT FT PVRKLQANKKVQGSRRRLREGRSQ" FT mRNA complement(join(38136771..38137507,38138656..38138697, FT 38143437..38143520,38143881..38143958,38144717..38144806, FT 38151890..38151935,38152981..38153048,38153156..38153258, FT 38153366..38153496,38153998..38154128,38154698..38154834, FT AL138679.11:2524..2672,AL138679.11:4127..4261, FT AL138679.11:4874..5086,AL138679.11:6297..6438, FT AL138679.11:6940..7086,AL138679.11:7980..8144, FT AL138679.11:10530..10687,AL138679.11:12258..12322, FT AL138679.11:17342..17440,AL138679.11:18766..18916)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-002" FT /product="periostin, osteoblast specific factor" FT /note="match: cDNAs: Em:D13665 Em:E05656" FT CDS complement(join(38137470..38137507,38138656..38138697, FT 38143437..38143520,38143881..38143958,38144717..38144806, FT 38151890..38151935,38152981..38153048,38153156..38153258, FT 38153366..38153496,38153998..38154128,38154698..38154834, FT AL138679.11:2524..2672,AL138679.11:4127..4261, FT AL138679.11:4874..5086,AL138679.11:6297..6438, FT AL138679.11:6940..7086,AL138679.11:7980..8144, FT AL138679.11:10530..10687,AL138679.11:12258..12322, FT AL138679.11:17342..17440,AL138679.11:18766..18884)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-002" FT /standard_name="OTTHUMP00000018269" FT /product="periostin, osteoblast specific factor" FT /protein_id="CAH73569.1" FT /translation="MIPFLPMFSLLLLLIVNPINANNHYDKILAHSRIRGRDQGPNVCA FT LQQILGTKKKYFSTCKNWYKKSICGQKTTVLYECCPGYMRMEGMKGCPAVLPIDHVYGT FT LGIVGATTTQRYSDASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLN FT ALHSHMINKRMLTKDLKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQIATNGV FT VHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGHFTLFAPTNEAFEK FT LPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITV FT NGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQLGLASALRP FT DGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQILETIGGKQLR FT VFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDKRFSTFLSLLE FT AADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHLTPGVFIGKG FT FEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKLLYPADTPV FT GNDQLLEILNKLIKYIQIKFVRGSTFKEIPVTVYKPIIKKYTKIIDGVPVEITEKETRE FT ERIITGPEIKYTRISTGGGETEETLKKLLQEEVTKVTKFIEGGDGHLFEDEEIKRLLQG FT DTPVRKLQANKKVQGSRRRLREGRSQ" FT mRNA complement(join(38136728..38137507,38138656..38138697, FT 38143437..38143520,38143881..38143958,38144717..38144806, FT 38145506..38145595,38151890..38151935,38152981..38153048, FT 38153156..38153258,38153366..38153496,38153998..38154128, FT 38154698..38154834,AL138679.11:2524..2672, FT AL138679.11:4127..4261,AL138679.11:4874..5086, FT AL138679.11:6297..6438,AL138679.11:6940..7086, FT AL138679.11:7980..8144,AL138679.11:10530..10687, FT AL138679.11:12258..12322,AL138679.11:17342..17440, FT AL138679.11:18766..18908)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-003" FT /product="periostin, osteoblast specific factor" FT /note="match: cDNAs: Em:D13664 Em:E05655" FT CDS complement(join(38137470..38137507,38138656..38138697, FT 38143437..38143520,38143881..38143958,38144717..38144806, FT 38145506..38145595,38151890..38151935,38152981..38153048, FT 38153156..38153258,38153366..38153496,38153998..38154128, FT 38154698..38154834,AL138679.11:2524..2672, FT AL138679.11:4127..4261,AL138679.11:4874..5086, FT AL138679.11:6297..6438,AL138679.11:6940..7086, FT AL138679.11:7980..8144,AL138679.11:10530..10687, FT AL138679.11:12258..12322,AL138679.11:17342..17440, FT AL138679.11:18766..18884)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-003" FT /standard_name="OTTHUMP00000018270" FT /product="periostin, osteoblast specific factor" FT /protein_id="CAH73570.1" FT /translation="MIPFLPMFSLLLLLIVNPINANNHYDKILAHSRIRGRDQGPNVCA FT LQQILGTKKKYFSTCKNWYKKSICGQKTTVLYECCPGYMRMEGMKGCPAVLPIDHVYGT FT LGIVGATTTQRYSDASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLN FT ALHSHMINKRMLTKDLKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQIATNGV FT VHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGHFTLFAPTNEAFEK FT LPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITV FT NGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQLGLASALRP FT DGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQILETIGGKQLR FT VFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDKRFSTFLSLLE FT AADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHLTPGVFIGKG FT FEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKLLYPADTPV FT GNDQLLEILNKLIKYIQIKFVRGSTFKEIPVTVYRPTLTKVKIEGEPEFRLIKEGETIT FT EVIHGEPIIKKYTKIIDGVPVEITEKETREERIITGPEIKYTRISTGGGETEETLKKLL FT QEEVTKVTKFIEGGDGHLFEDEEIKRLLQGDTPVRKLQANKKVQGSRRRLREGRSQ" FT mRNA complement(join(38136722..38137507,38138656..38138697, FT 38143881..38143958,38144717..38144806,38145506..38145595, FT 38148709..38148789,38151890..38151935,38152981..38153048, FT 38153156..38153258,38153366..38153496,38153998..38154128, FT 38154698..38154834,AL138679.11:2524..2672, FT AL138679.11:4127..4261,AL138679.11:4874..5086, FT AL138679.11:6297..6438,AL138679.11:6940..7086, FT AL138679.11:7980..8144,AL138679.11:10530..10687, FT AL138679.11:12258..12322,AL138679.11:17342..17440, FT AL138679.11:18766..18919)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-004" FT /product="periostin, osteoblast specific factor" FT /note="match: cDNAs: Em:BC007141" FT /note="match: ESTs: Em:AU117696 Em:AW391422 Em:AW815192 FT Em:AW956007 Em:BE156264 Em:BE156274 Em:BI916613 FT Em:BM830791" FT CDS complement(join(38137470..38137507,38138656..38138697, FT 38143881..38143958,38144717..38144806,38145506..38145595, FT 38148709..38148789,38151890..38151935,38152981..38153048, FT 38153156..38153258,38153366..38153496,38153998..38154128, FT 38154698..38154834,AL138679.11:2524..2672, FT AL138679.11:4127..4261,AL138679.11:4874..5086, FT AL138679.11:6297..6438,AL138679.11:6940..7086, FT AL138679.11:7980..8144,AL138679.11:10530..10687, FT AL138679.11:12258..12322,AL138679.11:17342..17440, FT AL138679.11:18766..18884)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-004" FT /standard_name="OTTHUMP00000018271" FT /product="periostin, osteoblast specific factor" FT /protein_id="CAH73571.1" FT /translation="MIPFLPMFSLLLLLIVNPINANNHYDKILAHSRIRGRDQGPNVCA FT LQQILGTKKKYFSTCKNWYKKSICGQKTTVLYECCPGYMRMEGMKGCPAVLPIDHVYGT FT LGIVGATTTQRYSDASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLN FT ALHSHMINKRMLTKDLKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQIATNGV FT VHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGHFTLFAPTNEAFEK FT LPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITV FT NGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQLGLASALRP FT DGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQILETIGGKQLR FT VFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDKRFSTFLSLLE FT AADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHLTPGVFIGKG FT FEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKLLYPADTPV FT GNDQLLEILNKLIKYIQIKFVRGSTFKEIPVTVYTTKIITKVVEPKIKVIEGSLQPIIK FT TEGPTLTKVKIEGEPEFRLIKEGETITEVIHGEPIIKKYTKIIDGVPVEITEKETREER FT IITGPEIKYTRISTGGGETEETLKKLLQEDTPVRKLQANKKVQGSRRRLREGRSQ" FT polyA_site complement(38136722) FT polyA_signal complement(38136737..38136742) FT mRNA complement(join(38136834..38137507,38138656..38139140)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-006" FT /product="periostin, osteoblast specific factor" FT /note="match: ESTs: Em:AU119902 Em:AW834773" FT mRNA complement(join(38139385..38139633,38143437..38143520, FT 38143881..38143927)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-008" FT /product="periostin, osteoblast specific factor" FT /note="match: ESTs: Em:AA329657.1" FT mRNA complement(join(38137358..38137507,38138656..38138697, FT 38143881..38143958,38144717..38144948)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-007" FT /product="periostin, osteoblast specific factor" FT /note="match: ESTs: Em:AW842885 Em:AW843163" FT mRNA complement(join(38142820..38143520,38143881..38143958, FT 38144717..38145672)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-005" FT /product="periostin, osteoblast specific factor" FT /note="match: cDNAs: Em:AK021444" FT /note="match: ESTs: Em:AA906342 Em:AU117023 Em:AU143959 FT Em:AW137148 Em:AW593970 Em:AW863958" FT misc_feature 38151980 FT /note="Clone_left_end: RP11-10M8" FT misc_feature 38155980..38258004 FT /note="annotated region of clone" FT mRNA complement(join(38211002..38211362,38213200..38213266, FT 38213395..38213436,38225402..38225596,38229225..38229420, FT 38237553..38237866,38248365..38248504, FT AL354802.15:8232..8568,AL354802.15:62170..62688, FT AL354802.15:99189..99593,AL356495.15:14744..14951)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-002" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF063824" FT mRNA complement(join(38211002..38211368,38211621..38211762, FT 38213177..38213266,38213395..38213436,38225402..38225596, FT 38229225..38229420,38237553..38237866,38248365..38248504, FT AL354802.15:8232..8568,AL354802.15:62170..62688, FT AL354802.15:99189..99593,AL356495.15:14744..14951)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-003" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF019663 Em:AF063823 Em:AF421359 FT Em:AF421364 Em:AF421365 Em:AF421366 Em:AF421367 Em:U50921" FT mRNA complement(join(38211002..38211368,38211621..38211762, FT 38213177..38213266,38213395..38213436,38229225..38229420, FT 38237553..38237866,38248365..38248504, FT AL354802.15:8232..8568,AL354802.15:62170..62688, FT AL354802.15:99189..99593,AL356495.15:14744..14951)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-004" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF063825" FT mRNA complement(join(38210773..38211762,38213177..38213266, FT 38213395..38213436,38225402..38225596,38229225..38229420, FT 38237553..38237866,38248365..38248504, FT AL354802.15:8232..8568,AL354802.15:62170..62688, FT AL354802.15:99189..99593,AL356495.15:14744..15574)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-001" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF175406.1 Em:BC104725.1 FT Em:BC105641.1 Em:BX648312.1" FT /note="match: ESTs: Em:BP378906.1 Em:BX092795.1 FT Em:CN364203.1 Em:DA189707.1 Em:DB274960.1 Em:DB292271.1" FT mRNA complement(join(AL646087.8:23066..23847, FT AL646087.8:24996..25037,AL646087.8:29777..29860, FT AL646087.8:30221..30298,AL646087.8:31057..31146, FT AL646087.8:31846..31935,AL646087.8:35049..35129, FT AL646087.8:38230..38275,AL646087.8:39321..39388, FT AL646087.8:39496..39598,AL646087.8:39706..39836, FT AL646087.8:40338..40468,AL646087.8:41038..41174, FT 38156503..38156651,38158106..38158240,38158853..38159065, FT 38160276..38160417,38160919..38161065,38161959..38162123, FT 38164509..38164666,38166237..38166301,38171321..38171419, FT 38172745..38172981)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-001" FT /product="periostin, osteoblast specific factor" FT /note="match: cDNAs: Em:D13666.1" FT /note="match: ESTs: Em:AU116857.1 Em:AU139611.1 FT Em:BF525659.1 Em:BP279867.1 Em:BY795054.2" FT CDS complement(join(AL646087.8:23810..23847, FT AL646087.8:24996..25037,AL646087.8:29777..29860, FT AL646087.8:30221..30298,AL646087.8:31057..31146, FT AL646087.8:31846..31935,AL646087.8:35049..35129, FT AL646087.8:38230..38275,AL646087.8:39321..39388, FT AL646087.8:39496..39598,AL646087.8:39706..39836, FT AL646087.8:40338..40468,AL646087.8:41038..41174, FT 38156503..38156651,38158106..38158240,38158853..38159065, FT 38160276..38160417,38160919..38161065,38161959..38162123, FT 38164509..38164666,38166237..38166301,38171321..38171419, FT 38172745..38172863)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-001" FT /standard_name="OTTHUMP00000018268" FT /product="periostin, osteoblast specific factor" FT /note="match: proteins: Sw:Q15063 Sw:Q15063.2" FT /protein_id="CAH70107.1" FT /translation="MIPFLPMFSLLLLLIVNPINANNHYDKILAHSRIRGRDQGPNVCA FT LQQILGTKKKYFSTCKNWYKKSICGQKTTVLYECCPGYMRMEGMKGCPAVLPIDHVYGT FT LGIVGATTTQRYSDASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLN FT ALHSHMINKRMLTKDLKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQIATNGV FT VHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGHFTLFAPTNEAFEK FT LPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITV FT NGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQLGLASALRP FT DGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQILETIGGKQLR FT VFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDKRFSTFLSLLE FT AADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHLTPGVFIGKG FT FEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKLLYPADTPV FT GNDQLLEILNKLIKYIQIKFVRGSTFKEIPVTVYTTKIITKVVEPKIKVIEGSLQPIIK FT TEGPTLTKVKIEGEPEFRLIKEGETITEVIHGEPIIKKYTKIIDGVPVEITEKETREER FT IITGPEIKYTRISTGGGETEETLKKLLQEEVTKVTKFIEGGDGHLFEDEEIKRLLQGDT FT PVRKLQANKKVQGSRRRLREGRSQ" FT mRNA complement(join(AL646087.8:23111..23847, FT AL646087.8:24996..25037,AL646087.8:29777..29860, FT AL646087.8:30221..30298,AL646087.8:31057..31146, FT AL646087.8:38230..38275,AL646087.8:39321..39388, FT AL646087.8:39496..39598,AL646087.8:39706..39836, FT AL646087.8:40338..40468,AL646087.8:41038..41174, FT 38156503..38156651,38158106..38158240,38158853..38159065, FT 38160276..38160417,38160919..38161065,38161959..38162123, FT 38164509..38164666,38166237..38166301,38171321..38171419, FT 38172745..38172895)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-002" FT /product="periostin, osteoblast specific factor" FT /note="match: cDNAs: Em:D13665 Em:E05656" FT CDS complement(join(AL646087.8:23810..23847, FT AL646087.8:24996..25037,AL646087.8:29777..29860, FT AL646087.8:30221..30298,AL646087.8:31057..31146, FT AL646087.8:38230..38275,AL646087.8:39321..39388, FT AL646087.8:39496..39598,AL646087.8:39706..39836, FT AL646087.8:40338..40468,AL646087.8:41038..41174, FT 38156503..38156651,38158106..38158240,38158853..38159065, FT 38160276..38160417,38160919..38161065,38161959..38162123, FT 38164509..38164666,38166237..38166301,38171321..38171419, FT 38172745..38172863)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-002" FT /standard_name="OTTHUMP00000018269" FT /product="periostin, osteoblast specific factor" FT /protein_id="CAH70104.1" FT /translation="MIPFLPMFSLLLLLIVNPINANNHYDKILAHSRIRGRDQGPNVCA FT LQQILGTKKKYFSTCKNWYKKSICGQKTTVLYECCPGYMRMEGMKGCPAVLPIDHVYGT FT LGIVGATTTQRYSDASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLN FT ALHSHMINKRMLTKDLKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQIATNGV FT VHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGHFTLFAPTNEAFEK FT LPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITV FT NGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQLGLASALRP FT DGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQILETIGGKQLR FT VFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDKRFSTFLSLLE FT AADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHLTPGVFIGKG FT FEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKLLYPADTPV FT GNDQLLEILNKLIKYIQIKFVRGSTFKEIPVTVYKPIIKKYTKIIDGVPVEITEKETRE FT ERIITGPEIKYTRISTGGGETEETLKKLLQEEVTKVTKFIEGGDGHLFEDEEIKRLLQG FT DTPVRKLQANKKVQGSRRRLREGRSQ" FT mRNA complement(join(AL646087.8:23068..23847, FT AL646087.8:24996..25037,AL646087.8:29777..29860, FT AL646087.8:30221..30298,AL646087.8:31057..31146, FT AL646087.8:31846..31935,AL646087.8:38230..38275, FT AL646087.8:39321..39388,AL646087.8:39496..39598, FT AL646087.8:39706..39836,AL646087.8:40338..40468, FT AL646087.8:41038..41174,38156503..38156651, FT 38158106..38158240,38158853..38159065,38160276..38160417, FT 38160919..38161065,38161959..38162123,38164509..38164666, FT 38166237..38166301,38171321..38171419,38172745..38172887)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-003" FT /product="periostin, osteoblast specific factor" FT /note="match: cDNAs: Em:D13664 Em:E05655" FT CDS complement(join(AL646087.8:23810..23847, FT AL646087.8:24996..25037,AL646087.8:29777..29860, FT AL646087.8:30221..30298,AL646087.8:31057..31146, FT AL646087.8:31846..31935,AL646087.8:38230..38275, FT AL646087.8:39321..39388,AL646087.8:39496..39598, FT AL646087.8:39706..39836,AL646087.8:40338..40468, FT AL646087.8:41038..41174,38156503..38156651, FT 38158106..38158240,38158853..38159065,38160276..38160417, FT 38160919..38161065,38161959..38162123,38164509..38164666, FT 38166237..38166301,38171321..38171419,38172745..38172863)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-003" FT /standard_name="OTTHUMP00000018270" FT /product="periostin, osteoblast specific factor" FT /protein_id="CAH70105.1" FT /translation="MIPFLPMFSLLLLLIVNPINANNHYDKILAHSRIRGRDQGPNVCA FT LQQILGTKKKYFSTCKNWYKKSICGQKTTVLYECCPGYMRMEGMKGCPAVLPIDHVYGT FT LGIVGATTTQRYSDASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLN FT ALHSHMINKRMLTKDLKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQIATNGV FT VHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGHFTLFAPTNEAFEK FT LPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITV FT NGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQLGLASALRP FT DGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQILETIGGKQLR FT VFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDKRFSTFLSLLE FT AADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHLTPGVFIGKG FT FEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKLLYPADTPV FT GNDQLLEILNKLIKYIQIKFVRGSTFKEIPVTVYRPTLTKVKIEGEPEFRLIKEGETIT FT EVIHGEPIIKKYTKIIDGVPVEITEKETREERIITGPEIKYTRISTGGGETEETLKKLL FT QEEVTKVTKFIEGGDGHLFEDEEIKRLLQGDTPVRKLQANKKVQGSRRRLREGRSQ" FT mRNA complement(join(AL646087.8:23062..23847, FT AL646087.8:24996..25037,AL646087.8:30221..30298, FT AL646087.8:31057..31146,AL646087.8:31846..31935, FT AL646087.8:35049..35129,AL646087.8:38230..38275, FT AL646087.8:39321..39388,AL646087.8:39496..39598, FT AL646087.8:39706..39836,AL646087.8:40338..40468, FT AL646087.8:41038..41174,38156503..38156651, FT 38158106..38158240,38158853..38159065,38160276..38160417, FT 38160919..38161065,38161959..38162123,38164509..38164666, FT 38166237..38166301,38171321..38171419,38172745..38172898)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-004" FT /product="periostin, osteoblast specific factor" FT /note="match: cDNAs: Em:BC007141" FT /note="match: ESTs: Em:AU117696 Em:AW391422 Em:AW815192 FT Em:AW956007 Em:BE156264 Em:BE156274 Em:BI916613 FT Em:BM830791" FT CDS complement(join(AL646087.8:23810..23847, FT AL646087.8:24996..25037,AL646087.8:30221..30298, FT AL646087.8:31057..31146,AL646087.8:31846..31935, FT AL646087.8:35049..35129,AL646087.8:38230..38275, FT AL646087.8:39321..39388,AL646087.8:39496..39598, FT AL646087.8:39706..39836,AL646087.8:40338..40468, FT AL646087.8:41038..41174,38156503..38156651, FT 38158106..38158240,38158853..38159065,38160276..38160417, FT 38160919..38161065,38161959..38162123,38164509..38164666, FT 38166237..38166301,38171321..38171419,38172745..38172863)) FT /gene="POSTN" FT /locus_tag="RP11-412K4.1-004" FT /standard_name="OTTHUMP00000018271" FT /product="periostin, osteoblast specific factor" FT /protein_id="CAH70106.1" FT /translation="MIPFLPMFSLLLLLIVNPINANNHYDKILAHSRIRGRDQGPNVCA FT LQQILGTKKKYFSTCKNWYKKSICGQKTTVLYECCPGYMRMEGMKGCPAVLPIDHVYGT FT LGIVGATTTQRYSDASKLREEIEGKGSFTYFAPSNEAWDNLDSDIRRGLESNVNVELLN FT ALHSHMINKRMLTKDLKNGMIIPSMYNNLGLFINHYPNGVVTVNCARIIHGNQIATNGV FT VHVIDRVLTQIGTSIQDFIEAEDDLSSFRAAAITSDILEALGRDGHFTLFAPTNEAFEK FT LPRGVLERIMGDKVASEALMKYHILNTLQCSESIMGGAVFETLEGNTIEIGCDGDSITV FT NGIKMVNKKDIVTNNGVIHLIDQVLIPDSAKQVIELAGKQQTTFTDLVAQLGLASALRP FT DGEYTLLAPVNNAFSDDTLSMDQRLLKLILQNHILKVKVGLNELYNGQILETIGGKQLR FT VFVYRTAVCIENSCMEKGSKQGRNGAIHIFREIIKPAEKSLHEKLKQDKRFSTFLSLLE FT AADLKELLTQPGDWTLFVPTNDAFKGMTSEEKEILIRDKNALQNIILYHLTPGVFIGKG FT FEPGVTNILKTTQGSKIFLKEVNDTLLVNELKSKESDIMTTNGVIHVVDKLLYPADTPV FT GNDQLLEILNKLIKYIQIKFVRGSTFKEIPVTVYTTKIITKVVEPKIKVIEGSLQPIIK FT TEGPTLTKVKIEGEPEFRLIKEGETITEVIHGEPIIKKYTKIIDGVPVEITEKETREER FT IITGPEIKYTRISTGGGETEETLKKLLQEDTPVRKLQANKKVQGSRRRLREGRSQ" FT polyA_site complement(38210725) FT polyA_signal complement(38210737..38210742) FT mRNA complement(join(38237565..38237861,38248365..38248507)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-007" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: ESTs: Em:BE859447" FT CDS complement(join(38211040..38211362,38213200..38213266, FT 38213395..38213436,38225402..38225596,38229225..38229420, FT 38237553..38237866,38248365..38248504, FT AL354802.15:8232..8568,AL354802.15:62170..62688, FT AL354802.15:99189..99566)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-002" FT /standard_name="OTTHUMP00000018273" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /protein_id="CAH70109.1" FT /translation="MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDY FT ASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAI FT RKEVVGAVELLLNHKKPSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQ FT KGVSVPRPHEVRCNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQ FT LSWELQELSKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQ FT SGNDLARLKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLF FT PVFSVCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPP FT TIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVK FT YSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDIL FT KFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTLFETLQSLFWSIF FT GLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW FT KFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGR FT RAADNLRRHHQYQEVMRNLVKRYVAAMIRDAKTEEVARQQAAGPLERNIQLESRGLASR FT GDLSIPGLSEQCVLVDHRERNTDTLGLQVGKRVCPFKSEKVVVEDTVPIIPKEKHAKEE FT DSSIDYDLNLPDTVTHEDYVTTRL" FT CDS complement(join(38211040..38211368,38211621..38211762, FT 38213177..38213266,38213395..38213436,38225402..38225596, FT 38229225..38229420,38237553..38237866,38248365..38248504, FT AL354802.15:8232..8568,AL354802.15:62170..62688, FT AL354802.15:99189..99566)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-003" FT /standard_name="OTTHUMP00000018274" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: proteins: Tr:Q91ZM0" FT /protein_id="CAH70110.1" FT /translation="MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDY FT ASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAI FT RKEVVGAVELLLNHKKPSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQ FT KGVSVPRPHEVRCNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQ FT LSWELQELSKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQ FT SGNDLARLKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLF FT PVFSVCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPP FT TIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVK FT YSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDIL FT KFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTLFETLQSLFWSIF FT GLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW FT KFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGR FT RAADNLRRHHQYQEVMRNLVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGL FT LRGSKLSTIQSANASKESSNSADSDEKSDSEEEVARQQAAGPLERNIQLESRGLASRGD FT LSIPGLSEQCVLVDHRERNTDTLGLQVGKRVCPFKSEKVVVEDTVPIIPKEKHAKEEDS FT SIDYDLNLPDTVTHEDYVTTRL" FT CDS complement(join(38211040..38211368,38211621..38211762, FT 38213177..38213266,38213395..38213436,38229225..38229420, FT 38237553..38237866,38248365..38248504, FT AL354802.15:8232..8568,AL354802.15:62170..62688, FT AL354802.15:99189..99566)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-004" FT /standard_name="OTTHUMP00000018275" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /protein_id="CAH70111.1" FT /translation="MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDY FT ASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAI FT RKEVVGAVELLLNHKKPSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQ FT KGVSVPRPHEVRCNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQ FT LSWELQELSKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQ FT SGNDLARLKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLF FT PVFSVCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPP FT TIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVK FT YSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDIL FT KFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTLFETLQSLFWSIF FT GLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIARRAADNL FT RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKL FT STIQSANASKESSNSADSDEKSDSEEEVARQQAAGPLERNIQLESRGLASRGDLSIPGL FT SEQCVLVDHRERNTDTLGLQVGKRVCPFKSEKVVVEDTVPIIPKEKHAKEEDSSIDYDL FT NLPDTVTHEDYVTTRL" FT CDS complement(join(38211040..38211762,38213177..38213266, FT 38213395..38213436,38225402..38225596,38229225..38229420, FT 38237553..38237866,38248365..38248504, FT AL354802.15:8232..8568,AL354802.15:62170..62688, FT AL354802.15:99189..99566)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-001" FT /standard_name="OTTHUMP00000018272" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: proteins: Sw:O35119.2 Sw:Q9QUQ5.1 Sw:Q9UBN4.1 FT Tr:Q2M2U7.1 Tr:Q5W0R1.1" FT /protein_id="CAH70112.1" FT /translation="MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDY FT ASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAI FT RKEVVGAVELLLNHKKPSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQ FT KGVSVPRPHEVRCNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQ FT LSWELQELSKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQ FT SGNDLARLKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLF FT PVFSVCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPP FT TIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVK FT YSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDIL FT KFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTLFETLQSLFWSIF FT GLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW FT KFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGR FT RAADNLRRHHQYQEVMRNLVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGL FT LRGSKLSTIQSANASKESSNSADSDEKSDSEGNSKDKKKNFSLFDLTTLIHPRSAAIAS FT ERHNISNGSALVVQEPPREKQRKVNFVTDIKNFGLFHRRSKQNAAEQNANQIFSVSEEV FT ARQQAAGPLERNIQLESRGLASRGDLSIPGLSEQCVLVDHRERNTDTLGLQVGKRVCPF FT KSEKVVVEDTVPIIPKEKHAKEEDSSIDYDLNLPDTVTHEDYVTTRL" FT mRNA complement(join(38210980..38211762,38213177..38213266, FT 38213395..38213436,38225402..38225596,38229225..38229420, FT 38237553..38237866,38248365..38248504, FT AL354802.15:8232..8568,AL354802.15:99189..99566)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-006" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF421362" FT CDS complement(join(38211040..38211762,38213177..38213266, FT 38213395..38213436,38225402..38225596,38229225..38229420, FT 38237553..38237866,38248365..38248504, FT AL354802.15:8232..8568,AL354802.15:99189..99566)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-006" FT /standard_name="OTTHUMP00000018277" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: proteins: Tr:Q96P03" FT /protein_id="CAH70114.1" FT /translation="MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDY FT ASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAI FT RKEVVGAVELLLNHKKPSGEKQFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFII FT GLLFPVFSVCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQ FT GPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIV FT AFVKYSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRML FT LDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTLFETLQSLF FT WSIFGLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHA FT DIEWKFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLIKWIWTHLCKKKMRRKPESFG FT TIGRRAADNLRRHHQYQEVMRNLVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRFE FT VLGLLRGSKLSTIQSANASKESSNSADSDEKSDSEGNSKDKKKNFSLFDLTTLIHPRSA FT AIASERHNISNGSALVVQEPPREKQRKVNFVTDIKNFGLFHRRSKQNAAEQNANQIFSV FT SEEVARQQAAGPLERNIQLESRGLASRGDLSIPGLSEQCVLVDHRERNTDTLGLQVGKR FT VCPFKSEKVVVEDTVPIIPKEKHAKEEDSSIDYDLNLPDTVTHEDYVTTRL" FT mRNA complement(join(38210980..38211762,38213177..38213266, FT 38213395..38213436,38225402..38225596,38229225..38229420, FT 38237553..38237866,38248365..38248504, FT AL354802.15:62170..62688,AL354802.15:99189..99566)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-005" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF421361" FT misc_feature 38255905 FT /note="Clone_left_end: RP11-54O10" FT misc_feature 38258005..38429088 FT /note="annotated region of clone" FT mRNA complement(join(AL138679.11:57023..57383, FT AL138679.11:59221..59287,AL138679.11:59416..59457, FT AL138679.11:71423..71617,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT 38266136..38266472,38320074..38320592,38357093..38357497, FT AL356495.15:14744..14951)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-002" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF063824" FT mRNA complement(join(AL138679.11:57023..57389, FT AL138679.11:57642..57783,AL138679.11:59198..59287, FT AL138679.11:59416..59457,AL138679.11:71423..71617, FT AL138679.11:75246..75441,AL138679.11:83574..83887, FT AL138679.11:94386..94525,38266136..38266472, FT 38320074..38320592,38357093..38357497, FT AL356495.15:14744..14951)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-003" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF019663 Em:AF063823 Em:AF421359 FT Em:AF421364 Em:AF421365 Em:AF421366 Em:AF421367 Em:U50921" FT mRNA complement(join(AL138679.11:57023..57389, FT AL138679.11:57642..57783,AL138679.11:59198..59287, FT AL138679.11:59416..59457,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT 38266136..38266472,38320074..38320592,38357093..38357497, FT AL356495.15:14744..14951)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-004" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF063825" FT mRNA complement(join(AL138679.11:56794..57783, FT AL138679.11:59198..59287,AL138679.11:59416..59457, FT AL138679.11:71423..71617,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT 38266136..38266472,38320074..38320592,38357093..38357497, FT AL356495.15:14744..15574)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-001" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF175406.1 Em:BC104725.1 FT Em:BC105641.1 Em:BX648312.1" FT /note="match: ESTs: Em:BP378906.1 Em:BX092795.1 FT Em:CN364203.1 Em:DA189707.1 Em:DB274960.1 Em:DB292271.1" FT misc_feature 38320459 FT /note="Clone_right_end: RP11-10M8" FT CDS complement(join(AL138679.11:57061..57383, FT AL138679.11:59221..59287,AL138679.11:59416..59457, FT AL138679.11:71423..71617,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT 38266136..38266472,38320074..38320592,38357093..38357470)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-002" FT /standard_name="OTTHUMP00000018273" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /protein_id="CAI15556.1" FT /translation="MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDY FT ASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAI FT RKEVVGAVELLLNHKKPSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQ FT KGVSVPRPHEVRCNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQ FT LSWELQELSKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQ FT SGNDLARLKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLF FT PVFSVCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPP FT TIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVK FT YSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDIL FT KFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTLFETLQSLFWSIF FT GLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW FT KFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGR FT RAADNLRRHHQYQEVMRNLVKRYVAAMIRDAKTEEVARQQAAGPLERNIQLESRGLASR FT GDLSIPGLSEQCVLVDHRERNTDTLGLQVGKRVCPFKSEKVVVEDTVPIIPKEKHAKEE FT DSSIDYDLNLPDTVTHEDYVTTRL" FT CDS complement(join(AL138679.11:57061..57389, FT AL138679.11:57642..57783,AL138679.11:59198..59287, FT AL138679.11:59416..59457,AL138679.11:71423..71617, FT AL138679.11:75246..75441,AL138679.11:83574..83887, FT AL138679.11:94386..94525,38266136..38266472, FT 38320074..38320592,38357093..38357470)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-003" FT /standard_name="OTTHUMP00000018274" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: proteins: Tr:Q91ZM0" FT /protein_id="CAI15557.1" FT /translation="MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDY FT ASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAI FT RKEVVGAVELLLNHKKPSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQ FT KGVSVPRPHEVRCNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQ FT LSWELQELSKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQ FT SGNDLARLKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLF FT PVFSVCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPP FT TIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVK FT YSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDIL FT KFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTLFETLQSLFWSIF FT GLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW FT KFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGR FT RAADNLRRHHQYQEVMRNLVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGL FT LRGSKLSTIQSANASKESSNSADSDEKSDSEEEVARQQAAGPLERNIQLESRGLASRGD FT LSIPGLSEQCVLVDHRERNTDTLGLQVGKRVCPFKSEKVVVEDTVPIIPKEKHAKEEDS FT SIDYDLNLPDTVTHEDYVTTRL" FT CDS complement(join(AL138679.11:57061..57389, FT AL138679.11:57642..57783,AL138679.11:59198..59287, FT AL138679.11:59416..59457,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT 38266136..38266472,38320074..38320592,38357093..38357470)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-004" FT /standard_name="OTTHUMP00000018275" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /protein_id="CAI15558.1" FT /translation="MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDY FT ASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAI FT RKEVVGAVELLLNHKKPSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQ FT KGVSVPRPHEVRCNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQ FT LSWELQELSKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQ FT SGNDLARLKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLF FT PVFSVCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPP FT TIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVK FT YSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDIL FT KFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTLFETLQSLFWSIF FT GLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIARRAADNL FT RRHHQYQEVMRNLVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKL FT STIQSANASKESSNSADSDEKSDSEEEVARQQAAGPLERNIQLESRGLASRGDLSIPGL FT SEQCVLVDHRERNTDTLGLQVGKRVCPFKSEKVVVEDTVPIIPKEKHAKEEDSSIDYDL FT NLPDTVTHEDYVTTRL" FT CDS complement(join(AL138679.11:57061..57783, FT AL138679.11:59198..59287,AL138679.11:59416..59457, FT AL138679.11:71423..71617,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT 38266136..38266472,38320074..38320592,38357093..38357470)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-001" FT /standard_name="OTTHUMP00000018272" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: proteins: Sw:O35119.2 Sw:Q9QUQ5.1 Sw:Q9UBN4.1 FT Tr:Q2M2U7.1 Tr:Q5W0R1.1" FT /protein_id="CAI15561.1" FT /translation="MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDY FT ASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAI FT RKEVVGAVELLLNHKKPSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQ FT KGVSVPRPHEVRCNCVECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQ FT LSWELQELSKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQ FT SGNDLARLKLAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLF FT PVFSVCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPP FT TIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVK FT YSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDIL FT KFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTLFETLQSLFWSIF FT GLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEW FT KFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGR FT RAADNLRRHHQYQEVMRNLVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGL FT LRGSKLSTIQSANASKESSNSADSDEKSDSEGNSKDKKKNFSLFDLTTLIHPRSAAIAS FT ERHNISNGSALVVQEPPREKQRKVNFVTDIKNFGLFHRRSKQNAAEQNANQIFSVSEEV FT ARQQAAGPLERNIQLESRGLASRGDLSIPGLSEQCVLVDHRERNTDTLGLQVGKRVCPF FT KSEKVVVEDTVPIIPKEKHAKEEDSSIDYDLNLPDTVTHEDYVTTRL" FT mRNA complement(join(AL138679.11:57001..57783, FT AL138679.11:59198..59287,AL138679.11:59416..59457, FT AL138679.11:71423..71617,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT 38266136..38266472,38357093..38357470)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-006" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF421362" FT CDS complement(join(AL138679.11:57061..57783, FT AL138679.11:59198..59287,AL138679.11:59416..59457, FT AL138679.11:71423..71617,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT 38266136..38266472,38357093..38357470)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-006" FT /standard_name="OTTHUMP00000018277" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: proteins: Tr:Q96P03" FT /protein_id="CAI15560.1" FT /translation="MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDY FT ASVKKSLEEAEIYFKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAI FT RKEVVGAVELLLNHKKPSGEKQFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFII FT GLLFPVFSVCYLIAPKSPLGLFIRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQ FT GPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIV FT AFVKYSALNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRML FT LDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLTCKGIRCEKQNNAFSTLFETLQSLF FT WSIFGLINLYVTNVKAQHEFTEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHA FT DIEWKFARTKLWMSYFEEGGTLPTPFNVIPSPKSLWYLIKWIWTHLCKKKMRRKPESFG FT TIGRRAADNLRRHHQYQEVMRNLVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRFE FT VLGLLRGSKLSTIQSANASKESSNSADSDEKSDSEGNSKDKKKNFSLFDLTTLIHPRSA FT AIASERHNISNGSALVVQEPPREKQRKVNFVTDIKNFGLFHRRSKQNAAEQNANQIFSV FT SEEVARQQAAGPLERNIQLESRGLASRGDLSIPGLSEQCVLVDHRERNTDTLGLQVGKR FT VCPFKSEKVVVEDTVPIIPKEKHAKEEDSSIDYDLNLPDTVTHEDYVTTRL" FT mRNA complement(join(AL138679.11:57001..57783, FT AL138679.11:59198..59287,AL138679.11:59416..59457, FT AL138679.11:71423..71617,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT 38320074..38320592,38357093..38357470)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-005" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF421361" FT misc_feature 38412030 FT /note="Clone_left_end: RP11-206L1" FT misc_feature 38428988 FT /note="Clone_right_end: RP11-54O10" FT misc_feature 38429089..38602762 FT /note="annotated region of clone" FT mRNA complement(join(AL138679.11:57023..57383, FT AL138679.11:59221..59287,AL138679.11:59416..59457, FT AL138679.11:71423..71617,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT AL354802.15:8232..8568,AL354802.15:62170..62688, FT AL354802.15:99189..99593,38443732..38443939)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-002" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF063824" FT mRNA complement(join(AL138679.11:57023..57389, FT AL138679.11:57642..57783,AL138679.11:59198..59287, FT AL138679.11:59416..59457,AL138679.11:71423..71617, FT AL138679.11:75246..75441,AL138679.11:83574..83887, FT AL138679.11:94386..94525,AL354802.15:8232..8568, FT AL354802.15:62170..62688,AL354802.15:99189..99593, FT 38443732..38443939)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-003" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF019663 Em:AF063823 Em:AF421359 FT Em:AF421364 Em:AF421365 Em:AF421366 Em:AF421367 Em:U50921" FT mRNA complement(join(AL138679.11:57023..57389, FT AL138679.11:57642..57783,AL138679.11:59198..59287, FT AL138679.11:59416..59457,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT AL354802.15:8232..8568,AL354802.15:62170..62688, FT AL354802.15:99189..99593,38443732..38443939)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-004" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF063825" FT mRNA complement(join(AL138679.11:56794..57783, FT AL138679.11:59198..59287,AL138679.11:59416..59457, FT AL138679.11:71423..71617,AL138679.11:75246..75441, FT AL138679.11:83574..83887,AL138679.11:94386..94525, FT AL354802.15:8232..8568,AL354802.15:62170..62688, FT AL354802.15:99189..99593,38443732..38444562)) FT /gene="TRPC4" FT /locus_tag="RP11-10M8.1-001" FT /product="transient receptor potential cation channel, FT subfamily C, member 4" FT /note="match: cDNAs: Em:AF175406.1 Em:BC104725.1 FT Em:BC105641.1 Em:BX648312.1" FT /note="match: ESTs: Em:BP378906.1 Em:BX092795.1 FT Em:CN364203.1 Em:DA189707.1 Em:DB274960.1 Em:DB292271.1" FT misc_feature 38481999 FT /note="Clone_left_end: RP11-93G5" FT misc_feature 38559205..38559215 FT /note="Sequence from overlapping clone bA93G5 (AL356359). FT Assembly confirmed by restriction digest" FT CDS complement(38567222..38568857) FT /pseudo FT /locus_tag="RP11-206L1.2-001" FT /product="heat shock 60kD protein 1 (chaperonin) (HSPD1) FT pseudogene" FT /note="match: proteins: Sw:O32847 Sw:P18687 Sw:P63039 FT Sw:Q42693 Sw:Q929V0 Sw:Q94596 Sw:Q9VMN5 Tr:O46219 FT Tr:Q96RI4" FT misc_feature 38602662 FT /note="Clone_right_end: RP11-206L1" FT misc_feature 38623052 FT /note="Clone_left_end: RP11-196I2" FT misc_feature 38623252..38770145 FT /note="annotated region of clone" FT mRNA complement(join(38628057..38628306,38633656..38633845, FT 38635533..38635590)) FT /locus_tag="RP11-196I2.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BF887749 Em:BF887755" FT mRNA complement(join(38627835..38628306,38635533..38635585)) FT /locus_tag="RP11-196I2.1-003" FT /product="novel transcript" FT /note="match: ESTs: Em:AI761065" FT misc_feature 38659624 FT /note="Clone_right_end: RP11-93G5" FT misc_feature 38697127 FT /note="Clone_left_end: RP11-384M8" FT mRNA complement(join(38624954..38625018,38635533..38635590, FT 38636286..38636371,38663710..38663797,38667563..38667685, FT 38717269..38717369)) FT /locus_tag="RP11-196I2.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BM023585" FT misc_feature 38770045 FT /note="Clone_right_end: RP11-196I2" FT misc_feature 38899178 FT /note="Clone_left_end: RP11-131P10" FT misc_feature 38899378..39022029 FT /note="annotated region of clone" FT mRNA join(38923986..38924058,38924136..38924192, FT 38928376..38929022) FT /gene="UFM1" FT /locus_tag="RP11-131P10.1-002" FT /product="ubiquitin-fold modifier 1" FT /note="match: ESTs: Em:BG944568 Em:BI917716 Em:BM925743" FT mRNA join(38923988..38924058,38924136..38924364, FT 38928376..38928433,38932230..38932269,38933438..38933470, FT 38934848..38935262) FT /gene="UFM1" FT /locus_tag="RP11-131P10.1-003" FT /product="ubiquitin-fold modifier 1" FT /note="match: ESTs: Em:BG533062" FT mRNA join(38924018..38924058,38924136..38924192, FT 38928376..38928433,38932230..38932269,38933438..38933470, FT 38934848..38937140) FT /gene="UFM1" FT /locus_tag="RP11-131P10.1-001" FT /product="ubiquitin-fold modifier 1" FT /note="match: ESTs: Em:BI458294.1 Em:DB106661.1" FT /note="match: cDNAs: Em:AF208844.1 Em:AK095490.1 FT Em:BC005193.1" FT mRNA join(38924023..38924058,38924136..38924364, FT 38928376..38928695) FT /gene="UFM1" FT /locus_tag="RP11-131P10.1-004" FT /product="ubiquitin-fold modifier 1" FT /note="match: ESTs: Em:AV717914" FT CDS join(38924057..38924058,38924136..38924192, FT 38928376..38928433,38932230..38932269,38933438..38933470, FT 38934848..38934915) FT /gene="UFM1" FT /locus_tag="RP11-131P10.1-001" FT /standard_name="OTTHUMP00000018797" FT /product="ubiquitin-fold modifier 1" FT /note="match: proteins: Sw:P61960.1 Sw:P61961.1 Sw:Q2KJG2.1 FT Sw:Q4R4I2.1 Sw:Q5BJP3.1 Sw:Q5R4N5.1 Sw:Q5RJW4.1 FT Sw:Q5ZMK7.1" FT /protein_id="CAH70411.1" FT /translation="MSKVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAA FT TSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRDRVGSC" FT CDS join(<38924133..38924192,38928376..38928433, FT 38932230..38932269,38933438..38933523) FT /codon_start=2 FT /gene="UFM1" FT /locus_tag="RP11-131P10.1-005" FT /standard_name="OTTHUMP00000018801" FT /product="ubiquitin-fold modifier 1" FT /protein_id="CAH70412.1" FT /translation="RSKVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAA FT TSAIITNDGIGINPAQTAGEYLKTHRGVGGVIYVN" FT mRNA join(<38924133..38924192,38928376..38928433, FT 38932230..38932269,38933438..38933918) FT /gene="UFM1" FT /locus_tag="RP11-131P10.1-005" FT /product="ubiquitin-fold modifier 1" FT /note="match: ESTs: Em:AA332707 Em:AV649719 Em:AV649981 FT Em:AV650897" FT CDS join(38924252..38924364,38928376..38928433, FT 38932230..38932269,38933438..38933470,38934848..38934915) FT /gene="UFM1" FT /locus_tag="RP11-131P10.1-003" FT /standard_name="OTTHUMP00000018799" FT /product="ubiquitin-fold modifier 1" FT /protein_id="CAH70414.1" FT /translation="MIRAFPTTTPRSLHLFTSSTFLARALPGAFPTGACEERLSVPEST FT PFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRDRVGSC" FT polyA_signal 38937118..38937123 FT polyA_site 38937140 FT misc_feature 39021830 FT /note="Clone_left_end: RP11-349O10" FT misc_feature 39022030..39151809 FT /note="annotated region of clone" FT misc_feature 39053163 FT /note="Clone_right_end: RP11-131P10" FT mRNA complement(join(39107480..39108157,39119324..39119436)) FT /locus_tag="RP11-349O10.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM927018.1" FT misc_feature 39126672..39126846 FT /note="Sequence from clone PCR only" FT mRNA join(39150777..39150839,39151742..39151809, FT complement(AC017111.4:193750..193787), FT complement(AC017111.4:192466..192731)) FT /locus_tag="RP11-571G1.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI383468.1 Em:AI911760.1" FT repeat_region complement(39344373..39344494) FT /rpt_family="Alu" FT repeat_region complement(39342434..39342713) FT /rpt_family="Alu" FT repeat_region complement(39342140..39342257) FT /rpt_family="L2" FT repeat_region complement(39341285..39341391) FT /rpt_family="MIR" FT repeat_region complement(39341156..39341265) FT /rpt_family="MIR" FT repeat_region complement(39340995..39341059) FT /rpt_family="L2" FT repeat_region complement(39339049..39339346) FT /rpt_family="Alu" FT repeat_region complement(39336583..39336871) FT /rpt_family="Alu" FT repeat_region complement(39336222..39336456) FT /rpt_family="MIR" FT repeat_region complement(39334903..39335108) FT /rpt_family="L2" FT repeat_region complement(39333024..39333186) FT /rpt_family="Alu" FT repeat_region complement(39332447..39332699) FT /rpt_family="L2" FT repeat_region complement(39331729..39332022) FT /rpt_family="Alu" FT repeat_region complement(39330978..39331249) FT /rpt_family="MER2_type" FT repeat_region complement(39330662..39330977) FT /rpt_family="Alu" FT repeat_region complement(39330328..39330661) FT /rpt_family="MER2_type" FT repeat_region complement(39329058..39329337) FT /rpt_family="Alu" FT repeat_region complement(39328626..39328773) FT /rpt_family="MIR" FT repeat_region complement(39325174..39325441) FT /rpt_family="L1" FT repeat_region complement(39325103..39325146) FT /rpt_family="L1" FT repeat_region complement(39324829..39325102) FT /rpt_family="Alu" FT repeat_region complement(39324488..39324828) FT /rpt_family="L1" FT repeat_region complement(39324307..39324483) FT /rpt_family="MaLR" FT repeat_region complement(39323658..39323916) FT /rpt_family="MER1_type" FT repeat_region complement(39322705..39322839) FT /rpt_family="MER103" FT repeat_region complement(39318641..39318928) FT /rpt_family="Alu" FT repeat_region complement(39318341..39318557) FT /rpt_family="Alu" FT repeat_region complement(39316576..39316834) FT /rpt_family="L1" FT repeat_region complement(39315168..39315300) FT /rpt_family="MIR" FT repeat_region complement(39313378..39313489) FT /rpt_family="L2" FT repeat_region complement(39313014..39313247) FT /rpt_family="MIR" FT repeat_region complement(39312729..39313008) FT /rpt_family="L2" FT repeat_region complement(39312422..39312728) FT /rpt_family="Alu" FT repeat_region complement(39311895..39312421) FT /rpt_family="L2" FT repeat_region complement(39311286..39311376) FT /rpt_family="L2" FT repeat_region complement(39309183..39309317) FT /rpt_family="MER1_type" FT repeat_region complement(39308876..39309182) FT /rpt_family="Alu" FT repeat_region complement(39308620..39308875) FT /rpt_family="MER1_type" FT repeat_region complement(39307815..39307944) FT /rpt_family="Alu" FT repeat_region complement(39307564..39307680) FT /rpt_family="MER1_type" FT repeat_region complement(39305609..39305714) FT /rpt_family="MER94" FT repeat_region complement(39302966..39303232) FT /rpt_family="Alu" FT repeat_region complement(39302553..39302849) FT /rpt_family="Alu" FT repeat_region complement(39301705..39301813) FT /rpt_family="L2" FT repeat_region complement(39301434..39301645) FT /rpt_family="Alu" FT repeat_region complement(39300091..39300652) FT /rpt_family="ERVL" FT repeat_region complement(39299316..39299790) FT /rpt_family="L2" FT repeat_region complement(39298476..39298560) FT /rpt_family="MIR" FT repeat_region complement(39297930..39298145) FT /rpt_family="MIR" FT repeat_region complement(39297778..39297918) FT /rpt_family="MER105" FT repeat_region complement(39297087..39297397) FT /rpt_family="Alu" FT repeat_region complement(39297086..39297149) FT /rpt_family="Alu" FT repeat_region complement(39296666..39296779) FT /rpt_family="MER1_type" FT repeat_region complement(39296514..39296569) FT /rpt_family="MER1_type" FT repeat_region complement(39296380..39296496) FT /rpt_family="Alu" FT repeat_region complement(39296150..39296348) FT /rpt_family="Alu" FT repeat_region complement(39296052..39296146) FT /rpt_family="MER1_type" FT repeat_region complement(39295148..39295315) FT /rpt_family="L1" FT repeat_region complement(39293658..39293908) FT /rpt_family="MaLR" FT repeat_region complement(39293359..39293657) FT /rpt_family="Alu" FT repeat_region complement(39293103..39293358) FT /rpt_family="MaLR" FT repeat_region complement(39292948..39293100) FT /rpt_family="MIR" FT repeat_region complement(39291550..39291843) FT /rpt_family="Alu" FT repeat_region complement(39291123..39291284) FT /rpt_family="CR1" FT repeat_region complement(39290645..39290944) FT /rpt_family="Alu" FT repeat_region complement(39288941..39289243) FT /rpt_family="Alu" FT repeat_region complement(39288831..39288926) FT /rpt_family="L1" FT repeat_region complement(39288584..39288833) FT /rpt_family="L1" FT repeat_region complement(39288233..39288343) FT /rpt_family="L2" FT repeat_region complement(39287948..39288158) FT /rpt_family="MER1_type" FT repeat_region complement(39287357..39287522) FT /rpt_family="MIR" FT repeat_region complement(39286263..39286330) FT /rpt_family="Alu" FT repeat_region complement(39286047..39286262) FT /rpt_family="Alu" FT repeat_region complement(39284758..39284840) FT /rpt_family="L2" FT repeat_region complement(39284170..39284354) FT /rpt_family="Alu" FT repeat_region complement(39284000..39284126) FT /rpt_family="Alu" FT repeat_region complement(39282895..39283196) FT /rpt_family="Alu" FT repeat_region complement(39282511..39282819) FT /rpt_family="Alu" FT repeat_region complement(39282279..39282397) FT /rpt_family="L2" FT repeat_region complement(39282201..39282276) FT /rpt_family="MIR" FT repeat_region complement(39279625..39279859) FT /rpt_family="MIR" FT repeat_region complement(39279381..39279567) FT /rpt_family="L2" FT repeat_region complement(39279185..39279329) FT /rpt_family="L2" FT repeat_region complement(39278826..39279184) FT /rpt_family="MaLR" FT repeat_region complement(39278336..39278825) FT /rpt_family="L2" FT repeat_region complement(39275121..39275259) FT /rpt_family="L1" FT repeat_region complement(39274756..39274834) FT /rpt_family="MIR" FT repeat_region complement(39272181..39272354) FT /rpt_family="MER1_type" FT repeat_region complement(39270948..39271236) FT /rpt_family="Alu" FT repeat_region complement(39270163..39270269) FT /rpt_family="Alu" FT misc_feature complement(39261237..39262299) FT /note="CpG_island (%GC=68.1, o/e=0.70, #CpGs=99)" FT repeat_region complement(39257687..39257864) FT /rpt_family="MIR" FT repeat_region complement(39257191..39257266) FT /rpt_family="MIR" FT repeat_region complement(39255979..39256041) FT /rpt_family="MIR" FT repeat_region complement(39255418..39255524) FT /rpt_family="ERVL" FT repeat_region complement(39254864..39254928) FT /rpt_family="MIR" FT repeat_region complement(39254452..39254740) FT /rpt_family="Alu" FT repeat_region complement(39252847..39253214) FT /rpt_family="CR1" FT repeat_region complement(39252776..39252843) FT /rpt_family="MIR" FT misc_feature complement(39252246..39252582) FT /note="similar to EST AW005054 (NID:g5853832) wz94b10.x1" FT misc_feature complement(39252246..39252382) FT /note="similar to EST AA835485 (NID:g2909213) ak75b02.s1" FT repeat_region complement(39251826..39251997) FT /rpt_family="L1" FT repeat_region complement(39251515..39251806) FT /rpt_family="Alu" FT repeat_region complement(39250885..39251228) FT /rpt_family="MER2_type" FT repeat_region complement(39250180..39250353) FT /rpt_family="Alu" FT repeat_region complement(39249994..39250066) FT /rpt_family="MIR" FT repeat_region complement(39249629..39249676) FT /rpt_family="ERVL" FT repeat_region complement(39249233..39249542) FT /rpt_family="ERVL" FT repeat_region complement(39248265..39249232) FT /rpt_family="ERVL" FT repeat_region complement(39247782..39248272) FT /rpt_family="ERVL" FT repeat_region complement(39245984..39246037) FT /rpt_family="L2" FT repeat_region complement(39244815..39245030) FT /rpt_family="MER1_type" FT repeat_region complement(39244398..39244803) FT /rpt_family="ERV" FT repeat_region complement(39243746..39243870) FT /rpt_family="L2" FT repeat_region complement(39242874..39243025) FT /rpt_family="L1" FT repeat_region complement(39242630..39242808) FT /rpt_family="Alu" FT repeat_region complement(39242282..39242628) FT /rpt_family="L1" FT repeat_region complement(39241939..39242199) FT /rpt_family="L1" FT repeat_region complement(39241917..39241942) FT /rpt_family="MaLR" FT repeat_region complement(39241185..39241916) FT /rpt_family="MaLR" FT repeat_region complement(39240868..39241184) FT /rpt_family="MaLR" FT repeat_region complement(39240301..39240593) FT /rpt_family="Alu" FT repeat_region complement(39239443..39239510) FT /rpt_family="MIR" FT repeat_region complement(39237950..39238098) FT /rpt_family="L2" FT repeat_region complement(39237091..39237170) FT /rpt_family="L2" FT repeat_region complement(39232405..39232507) FT /rpt_family="L2" FT repeat_region complement(39232313..39232384) FT /rpt_family="Mariner" FT repeat_region complement(39231927..39232217) FT /rpt_family="Alu" FT repeat_region complement(39231634..39231846) FT /rpt_family="L2" FT repeat_region complement(39229999..39230902) FT /rpt_family="ERV1" FT repeat_region complement(39229058..39229320) FT /rpt_family="Alu" FT repeat_region complement(39228333..39228436) FT /rpt_family="Alu" FT repeat_region complement(39226411..39227038) FT /rpt_family="MER1_type" FT repeat_region complement(39225725..39226410) FT /rpt_family="MER1_type" FT repeat_region complement(39225258..39225459) FT /rpt_family="MIR" FT repeat_region complement(39222327..39222743) FT /rpt_family="ERVL" FT repeat_region complement(39220762..39221065) FT /rpt_family="Alu" FT repeat_region complement(39220271..39220422) FT /rpt_family="L1" FT repeat_region complement(39219416..39219744) FT /rpt_family="L2" FT repeat_region complement(39218656..39218958) FT /rpt_family="Alu" FT repeat_region complement(39218308..39218376) FT /rpt_family="L2" FT repeat_region complement(39218135..39218190) FT /rpt_family="L2" FT repeat_region complement(39217202..39217495) FT /rpt_family="Alu" FT repeat_region complement(39216874..39217154) FT /rpt_family="Alu" FT repeat_region complement(39216416..39216691) FT /rpt_family="Alu" FT repeat_region complement(39215964..39216147) FT /rpt_family="MER1_type" FT repeat_region complement(39214837..39215152) FT /rpt_family="Alu" FT repeat_region complement(39214706..39214824) FT /rpt_family="MIR" FT repeat_region complement(39213737..39213935) FT /rpt_family="L1" FT repeat_region complement(39213398..39213728) FT /rpt_family="L1" FT repeat_region complement(39213018..39213336) FT /rpt_family="L1" FT repeat_region complement(39212532..39212971) FT /rpt_family="L1" FT repeat_region complement(39212266..39212525) FT /rpt_family="L1" FT repeat_region complement(39210124..39210555) FT /rpt_family="ERV1" FT repeat_region complement(39208845..39208924) FT /rpt_family="L2" FT repeat_region complement(39207875..39208159) FT /rpt_family="L2" FT repeat_region complement(39206275..39206599) FT /rpt_family="AcHobo" FT repeat_region complement(39205985..39206274) FT /rpt_family="Alu" FT repeat_region complement(39205893..39205984) FT /rpt_family="AcHobo" FT repeat_region complement(39205464..39205765) FT /rpt_family="Alu" FT repeat_region complement(39205411..39205458) FT /rpt_family="ERVL" FT repeat_region complement(39205210..39205389) FT /rpt_family="AcHobo" FT repeat_region complement(39205043..39205194) FT /rpt_family="MER1_type" FT repeat_region complement(39204739..39204998) FT /rpt_family="L2" FT repeat_region complement(39204074..39204282) FT /rpt_family="MIR" FT repeat_region complement(39202323..39202466) FT /rpt_family="Alu" FT repeat_region complement(39202210..39202322) FT /rpt_family="Alu" FT repeat_region complement(39201764..39201980) FT /rpt_family="L1" FT repeat_region complement(39200985..39201047) FT /rpt_family="MaLR" FT repeat_region complement(39200176..39200236) FT /rpt_family="L2" FT repeat_region complement(39199479..39199845) FT /rpt_family="L1" FT repeat_region complement(39198806..39199477) FT /rpt_family="ERV1" FT repeat_region complement(39198527..39198805) FT /rpt_family="L1" FT repeat_region complement(39197645..39197730) FT /rpt_family="L1" FT repeat_region complement(39197212..39197414) FT /rpt_family="L1" FT repeat_region complement(39197061..39197198) FT /rpt_family="L1" FT repeat_region complement(39196899..39196971) FT /rpt_family="L1" FT repeat_region complement(39195086..39195391) FT /rpt_family="Alu" FT repeat_region complement(39195024..39195083) FT /rpt_family="L2" FT repeat_region complement(39194637..39194831) FT /rpt_family="L1" FT repeat_region complement(39194290..39194647) FT /rpt_family="L1" FT repeat_region complement(39194205..39194283) FT /rpt_family="MaLR" FT repeat_region complement(39193811..39194187) FT /rpt_family="L1" FT repeat_region complement(39193643..39193705) FT /rpt_family="L1" FT repeat_region complement(39192818..39192886) FT /rpt_family="MIR" FT misc_feature complement(39191668..39192120) FT /note="similar to EST AL036694 (NID:g5927861)" FT misc_feature complement(39191426..39192048) FT /note="similar to EST AA880232 (NID:g2989215) vx39d04.r1" FT misc_feature complement(39191639..39192011) FT /note="similar to EST H65049 (NID:g1023789) yr69c10.r1" FT misc_feature complement(39191421..39191910) FT /note="similar to EST W56890 (NID:g1358786) zc01g01.r1" FT misc_feature complement(39191428..39191847) FT /note="similar to EST AW170507 (NID:g6402032) xn62g06.x1" FT misc_feature complement(39191428..39191832) FT /note="similar to EST W02856 (NID:g1274834) za05c04.r1" FT repeat_region complement(39191205..39191416) FT /rpt_family="L1" FT misc_feature complement(39191060..39191160) FT /note="similar to EST W02856 (NID:g1274834) za05c04.r1" FT misc_feature complement(39191028..39191160) FT /note="similar to EST AW170507 (NID:g6402032) xn62g06.x1" FT repeat_region complement(39190886..39191050) FT /rpt_family="L1" FT misc_feature complement(39190773..39190858) FT /note="similar to EST AW170507 (NID:g6402032) xn62g06.x1" FT repeat_region complement(39189797..39190167) FT /rpt_family="MaLR" FT repeat_region complement(39187898..39187985) FT /rpt_family="L2" FT repeat_region complement(39187762..39187872) FT /rpt_family="L2" FT repeat_region complement(39187354..39187761) FT /rpt_family="ERVL" FT repeat_region complement(39187009..39187353) FT /rpt_family="L2" FT repeat_region complement(39185321..39185372) FT /rpt_family="MaLR" FT repeat_region complement(39185275..39185320) FT /rpt_family="MaLR" FT repeat_region complement(39185047..39185252) FT /rpt_family="Alu" FT repeat_region complement(39184963..39185046) FT /rpt_family="Alu" FT repeat_region complement(39184604..39184962) FT /rpt_family="MaLR" FT repeat_region complement(39184314..39184606) FT /rpt_family="MaLR" FT repeat_region complement(39183589..39183724) FT /rpt_family="L2" FT repeat_region complement(39183250..39183329) FT /rpt_family="ERV1" FT repeat_region complement(39183168..39183274) FT /rpt_family="ERV1" FT repeat_region complement(39182863..39183158) FT /rpt_family="Alu" FT repeat_region complement(39182544..39182677) FT /rpt_family="AcHobo" FT repeat_region complement(39182371..39182524) FT /rpt_family="L2" FT repeat_region complement(39180762..39180908) FT /rpt_family="MIR" FT repeat_region complement(39178483..39178976) FT /rpt_family="CR1" FT misc_feature complement(39178045..39178462) FT /note="similar to EST AI809219 (NID:g5395785) wf69c04.x1" FT repeat_region complement(39177229..39177291) FT /rpt_family="L2" FT repeat_region complement(39176434..39176445) FT /rpt_family="L2" FT repeat_region complement(39176129..39176433) FT /rpt_family="Alu" FT repeat_region complement(39175970..39176128) FT /rpt_family="L2" FT repeat_region complement(39175883..39175969) FT /rpt_family="L2" FT repeat_region complement(39174584..39174740) FT /rpt_family="MIR" FT repeat_region complement(39174204..39174495) FT /rpt_family="Alu" FT repeat_region complement(39172939..39174128) FT /rpt_family="L1" FT repeat_region complement(39172857..39172927) FT /rpt_family="L1" FT repeat_region complement(39172420..39172848) FT /rpt_family="ERVL" FT repeat_region complement(39171668..39172411) FT /rpt_family="L1" FT repeat_region complement(39171080..39171408) FT /rpt_family="L1" FT repeat_region complement(39170915..39171043) FT /rpt_family="MER2_type" FT repeat_region complement(39170663..39170917) FT /rpt_family="MER2_type" FT repeat_region complement(39170347..39170449) FT /rpt_family="L1" FT repeat_region complement(39169942..39170318) FT /rpt_family="MaLR" FT repeat_region complement(39169365..39169542) FT /rpt_family="L2" FT repeat_region complement(39168753..39168910) FT /rpt_family="L2" FT repeat_region complement(39168509..39168574) FT /rpt_family="L2" FT repeat_region complement(39168117..39168164) FT /rpt_family="L1" FT repeat_region complement(39167207..39168115) FT /rpt_family="L1" FT repeat_region complement(39165751..39165970) FT /rpt_family="MIR" FT repeat_region complement(39163727..39164894) FT /rpt_family="MER2_type" FT repeat_region complement(39163436..39163726) FT /rpt_family="Alu" FT repeat_region complement(39163390..39163435) FT /rpt_family="MER2_type" FT repeat_region complement(39162144..39162300) FT /rpt_family="MIR" FT repeat_region complement(39161989..39162114) FT /rpt_family="MIR" FT repeat_region complement(39161536..39161668) FT /rpt_family="Alu" FT repeat_region complement(39160352..39160652) FT /rpt_family="MaLR" FT repeat_region complement(39159648..39159913) FT /rpt_family="MIR" FT repeat_region complement(39158239..39158467) FT /rpt_family="MIR" FT repeat_region complement(39157863..39158156) FT /rpt_family="Alu" FT repeat_region complement(39157592..39157732) FT /rpt_family="L2" FT repeat_region complement(39156981..39157489) FT /rpt_family="L2" FT repeat_region complement(39156594..39156827) FT /rpt_family="L1" FT repeat_region complement(39154907..39155124) FT /rpt_family="L1" FT repeat_region complement(39154538..39154902) FT /rpt_family="ERVL" FT repeat_region complement(39154412..39154465) FT /rpt_family="ERVL" FT repeat_region complement(39154286..39154411) FT /rpt_family="L1" FT repeat_region complement(39154050..39154218) FT /rpt_family="Alu" FT repeat_region complement(39153562..39153902) FT /rpt_family="MaLR" FT repeat_region complement(39153160..39153457) FT /rpt_family="Alu" FT misc_feature complement(39152866..39153131) FT /note="similar to EST AI383468 (NID:g4196249) te30g09.x1" FT repeat_region complement(39151810..39151907) FT /rpt_family="MaLR" FT misc_feature complement(39151810..39151847) FT /note="similar to EST AI383468 (NID:g4196249) te30g09.x1" FT misc_feature 39345597..39368193 FT /note="annotated region of clone" FT CDS join(complement(AC017111.4:78943..84115), FT complement(AC017111.4:73673..73762), FT complement(AC017111.4:7010..7156), FT complement(AC017111.4:1652..1882),39357207..39357332, FT 39358694..39358945,AL354819.15:54517..54666, FT AL354819.15:56405..56614,AL354819.15:57982..58179, FT AL354819.15:58888..59052,AL354819.15:59630..59812, FT AL354819.15:64070..64200,AL354819.15:65819..65977, FT AL354819.15:67231..67534,AL354819.15:69375..69506, FT AL354819.15:72219..72550,AL354819.15:80686..80878, FT AL354819.15:82426..82530,AL354819.15:83966..84093, FT AL354819.15:84192..84326,AL354819.15:85061..85187, FT AL354819.15:86078..86265,AL354819.15:86775..86921, FT AL354819.15:88228..88731) FT /gene="FREM2" FT /locus_tag="RP11-7B3.1-001" FT /standard_name="OTTHUMP00000018288" FT /product="FRAS1 related extracellular matrix protein 2" FT /note="match: proteins: Sw:Q5SZK8.2" FT /protein_id="CAI12790.2" FT /translation="MHSAGTPGLSSRRTGNSTSFQPGPPPPPRLLLLLLLLLSLVSRVP FT AQPAAFGRALLSPGLAGAAGVPAEEAIVLANRGLRVPFGREVWLDPLHDLVLQVQPGDR FT CAVSVLDNDALAQRPGRLSPKRFPCDFGPGEVRYSHLGARSPSRDRVRLQLRYDAPGGA FT VVLPLVLEVEVVFTQLEVVTRNLPLVVEELLGTSNALDARSLEFAFQPETEECRVGILS FT GLGALPRYGELLHYPQVPGGAREGGAPETLLMDCKAFQELGVRYRHTAASRSPNRDWIP FT MVVELRSRGAPVGSPALKREHFQVLVRIRGGAENTAPKPSFVAMMMMEVDQFVLTALTP FT DMLAAEDAESPSDLLIFNLTSPFQPGQGYLVSTDDRSLPLSSFTQRDLRLLKIAYQPPS FT EDSDQERLFELELEVVDLEGAASDPFAFMVVVKPMNTMAPVVTRNTGLILYEGQSRPLT FT GPAGSGPQNLVISDEDDLEAVRLEVVAGLRHGHLVILGASSGSSAPKSFTVAELAAGQV FT VYQHDDRDGSLSDNLVLRMVDGGGRHQVQFLFPITLVPVDDQPPVLNANTGLTLAEGET FT VPILPLSLSATDMDSDDSLLLFVLESPFLTTGHLLLRQTHPPHEKQELLRGLWRKEGAF FT YERTVTEWQQQDITEGRLFYRHSGPHSPGPVTDQFTFRVQDNHDPPNQSGLQRFVIRIH FT PVDRLPPELGSGCPLRMVVQESQLTPLRKKWLRYTDLDTDDRELRYTVTQSPTDTDENH FT LPAPLGTLVLTDNPSVVVTHFTQAQINHHKIAYRPPGQELGVATRVAQFQFQVEDRAGN FT VAPGTFTLYLHPVDNQPPEILNTGFTIQEKGHHILSETELHVNDVDTDVAHISFTLTQA FT PKHGHMRVSGQILHVGGLFHLEDIKQGRVSYAHNGDKSLTDSCSLEVSDRHHVVPITLR FT VNVRPVDDEVPILSHPTGTLESYLDVLENGATEITANVIKGTNEETDDLMLTFLLEDPP FT LYGEILVNGIPAEQFTQRDILEGSVVYTHTSGEIGLLPKADSFNLSLSDMSQEWRIGGN FT TIQGVTIWVTILPVDSQAPEIFVGEQLIVMEGDKSVITSVHISAEDVDSLNDDILCTIV FT IQPTSGYVENISPAPGSEKSRAGIAISAFNLKDLRQGHINYVQSVHKGVEPVEDRFVFR FT CSDGINFSERQFFPIVIIPTNDEQPEMFMREFMVMEGMSLVIDTPILNAADADVPLDDL FT TFTITQFPTHGHIMNQLINGTVLVESFTLDQIIESSSIIYEHDDSETQEDSFVIKLTDG FT KHSVEKTVLIIVIPVDDETPRMTINNGLEIEIGDTKIINNKILMATDLDSEDKSLVYII FT RYGPGHGLLQRRKPTGAFENITLGMNFTQDEVDRNLIQYVHLGQEGIRDLIKFDVTDGI FT NPLIDRYFYVSIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSDLNSPDENLVFTIT FT RAPMRGHLECTDQPGVSITSFTQLQLAGNKIYYIHTADDEVKMDSFEFQVTDGRNPVFR FT TFRISISDVDNKKPVVTIHKLVVSESENKLITPFELTVEDRDTPDKLLKFTITQVPIHG FT HLLFNNTRPVMVFTKQDLNENLISYKHDGTESSEDSFSFTVTDGTHTDFYVFPDTVFET FT RRPQVMKIQVLAVDNSVPQIAVNKGASTLRTLATGHLGFMITSKILKVEDRDSLHISLR FT FIVTEAPQHGYLLNLDKGNHSITQFTQADIDDMKICYVLREGANATSDMFYFAVEDGGG FT NKLTYQNFRLNWAWISFEKEYYLVNEDSKFLDVVLKRRGYLGETSFISIGTRDRTAEKD FT KDFKGKAQKQVQFNPGQTRATWRVRILSDGEHEQSETFQVVLSEPVLAALEFPTVATVE FT IVDPGDEPTVFIPQSKYSVEEDVGELFIPIRRSGDVSQELMVVCYTQQGTATGTVPTSV FT LSYSDYISRPEDHTSVVRFDKDEREKLCRIVIIDDSLYEEEETFHVLLSMPMGGRIGSE FT FPGAQVTIVPDKDDEPIFYFGDVEYSVDESAGYVEVQVWRTGTDLSKSSSVTVRSRKTD FT PPSADAGTDYVGISRNLDFAPGVNMQPVRVVILDDLGQPALEGIEKFELVLRMPMNAAL FT GEPSKATVSINDSVSDLPKMQFKERIYTGSESDGQIVTMIHRTGDVQYRSSVRCYTRQG FT SAQVMMDFEERPNTDTSIITFLPGETEKPCILELMDDVLYEEVEELRLVLGTPQSNSPF FT GAAVGEQNETLIRIRDDADKTVIKFGETKFSVTEPKEPGESVVIRIPVIRQGDTSKVSI FT VRVHTKDGSATSGEDYHPVSEEIEFKEGETQHVVEIEVTFDGVREMREAFTVHLKPDEN FT MIAEMQLTKAIVYIEEMSSMADVTFPSVPQIVSLLMYDDTSKAKESAEPMSGYPVICIT FT ACNPKYSDYDKTGSICASENINDTLTRYRWLISAPAGPDGVTSPMREVDFDTFFTSSKM FT VTLDSIYFQPGSRVQCAARAVNTNGDEGLELMSPIVTISREEGLCQPRVPGVVGAEPFS FT AKLRYTGPEDADYTNLIKLTVTMPHIDGMLPVISTRELSNFELTLSPDGTRVGNHKCSN FT LLDYTEVKTHYGFLTDATKNPEIIGETYPYQYSLSIRGSTTLRFYRNLNLEACLWEFVS FT YYDMSELLADCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLKSEL FT RLTFVYDTAILWNDGIGSPPEAELQGSLYPTSMRIGDEGRLAVHFKTEAQFHGLFVLSH FT PASFTSSVIMSADHPGLTFSLRLIRSEPTYNQPVQQWSFVSDFAVRDYSGTYTVKLVPC FT TAPSHQEYRLPVTCNPREPVTFDLDIRFQQVSDPVAAEFSLNTQMYLLSKKSLWLSDGS FT MGFGQESDVAFAEGDIIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYSPMNAE FT YGCLADSPSLLYRFKIVDKAQPETQATSFGNVLFNAKLAVDDPEAILLVNQPGSDGFKV FT DSTPLFQVALGREWYIHTIYTVRSKDNANRGIGKRSVEYHSLVSQGKPQSTTKSRKKRE FT IRSTPSLAWEIGAENSRGTNIQHIALDRTKRQIPHGRAPPDGILPWELNSPSSAVSLVT FT VVGGTTVGLLTICLTVIAVLMCRGKESFRGKDAPKGSSSSEPMVPPQSHHNDSSEV" FT mRNA join(complement(AC017111.4:78943..84331), FT complement(AC017111.4:73673..73762), FT complement(AC017111.4:7010..7156), FT complement(AC017111.4:1652..1882),39357207..39357332, FT 39358694..39358945,AL354819.15:54517..54666, FT AL354819.15:56405..56614,AL354819.15:57982..58179, FT AL354819.15:58888..59052,AL354819.15:59630..59812, FT AL354819.15:64070..64200,AL354819.15:65819..65977, FT AL354819.15:67231..67534,AL354819.15:69375..69506, FT AL354819.15:72219..72550,AL354819.15:80686..80878, FT AL354819.15:82426..82530,AL354819.15:83966..84093, FT AL354819.15:84192..84326,AL354819.15:85061..85187, FT AL354819.15:86078..86265,AL354819.15:86775..86921, FT AL354819.15:88228..93881) FT /gene="FREM2" FT /locus_tag="RP11-7B3.1-001" FT /product="FRAS1 related extracellular matrix protein 2" FT /note="match: cDNAs: Em:AB236662.1 Em:AJ833643.1 FT Em:BX538150.1 Em:BX538304.1 Em:CR933724.1" FT /note="match: ESTs: Em:AI289430.1 Em:AW236058.1 FT Em:BM983495.1 Em:DA454575.1" FT misc_feature 39368194..39519342 FT /note="annotated region of clone" FT mRNA join(39395833..39395985,39420710..39420859, FT 39422598..39422807,39424175..39424372) FT /gene="FREM2" FT /locus_tag="RP11-7B3.1-002" FT /product="FRAS1 related extracellular matrix protein 2" FT /note="match: ESTs: Em:AL119393.1" FT mRNA complement(join(39395935..39396239,39401548..39401707)) FT /locus_tag="RP11-7B3.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI964923.1" FT misc_feature 39425263..39425291 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT CDS join(complement(AC017111.4:78943..84115), FT complement(AC017111.4:73673..73762), FT complement(AC017111.4:7010..7156), FT complement(AC017111.4:1652..1882), FT AL590007.5:137842..137967,AL590007.5:139329..139580, FT 39420710..39420859,39422598..39422807,39424175..39424372, FT 39425081..39425245,39425823..39426005,39430263..39430393, FT 39432012..39432170,39433424..39433727,39435568..39435699, FT 39438412..39438743,39446879..39447071,39448619..39448723, FT 39450159..39450286,39450385..39450519,39451254..39451380, FT 39452271..39452458,39452968..39453114,39454421..39454924) FT /gene="FREM2" FT /locus_tag="RP11-7B3.1-001" FT /standard_name="OTTHUMP00000018288" FT /product="FRAS1 related extracellular matrix protein 2" FT /note="match: proteins: Sw:Q5SZK8.2" FT /protein_id="CAI16761.2" FT /translation="MHSAGTPGLSSRRTGNSTSFQPGPPPPPRLLLLLLLLLSLVSRVP FT AQPAAFGRALLSPGLAGAAGVPAEEAIVLANRGLRVPFGREVWLDPLHDLVLQVQPGDR FT CAVSVLDNDALAQRPGRLSPKRFPCDFGPGEVRYSHLGARSPSRDRVRLQLRYDAPGGA FT VVLPLVLEVEVVFTQLEVVTRNLPLVVEELLGTSNALDARSLEFAFQPETEECRVGILS FT GLGALPRYGELLHYPQVPGGAREGGAPETLLMDCKAFQELGVRYRHTAASRSPNRDWIP FT MVVELRSRGAPVGSPALKREHFQVLVRIRGGAENTAPKPSFVAMMMMEVDQFVLTALTP FT DMLAAEDAESPSDLLIFNLTSPFQPGQGYLVSTDDRSLPLSSFTQRDLRLLKIAYQPPS FT EDSDQERLFELELEVVDLEGAASDPFAFMVVVKPMNTMAPVVTRNTGLILYEGQSRPLT FT GPAGSGPQNLVISDEDDLEAVRLEVVAGLRHGHLVILGASSGSSAPKSFTVAELAAGQV FT VYQHDDRDGSLSDNLVLRMVDGGGRHQVQFLFPITLVPVDDQPPVLNANTGLTLAEGET FT VPILPLSLSATDMDSDDSLLLFVLESPFLTTGHLLLRQTHPPHEKQELLRGLWRKEGAF FT YERTVTEWQQQDITEGRLFYRHSGPHSPGPVTDQFTFRVQDNHDPPNQSGLQRFVIRIH FT PVDRLPPELGSGCPLRMVVQESQLTPLRKKWLRYTDLDTDDRELRYTVTQSPTDTDENH FT LPAPLGTLVLTDNPSVVVTHFTQAQINHHKIAYRPPGQELGVATRVAQFQFQVEDRAGN FT VAPGTFTLYLHPVDNQPPEILNTGFTIQEKGHHILSETELHVNDVDTDVAHISFTLTQA FT PKHGHMRVSGQILHVGGLFHLEDIKQGRVSYAHNGDKSLTDSCSLEVSDRHHVVPITLR FT VNVRPVDDEVPILSHPTGTLESYLDVLENGATEITANVIKGTNEETDDLMLTFLLEDPP FT LYGEILVNGIPAEQFTQRDILEGSVVYTHTSGEIGLLPKADSFNLSLSDMSQEWRIGGN FT TIQGVTIWVTILPVDSQAPEIFVGEQLIVMEGDKSVITSVHISAEDVDSLNDDILCTIV FT IQPTSGYVENISPAPGSEKSRAGIAISAFNLKDLRQGHINYVQSVHKGVEPVEDRFVFR FT CSDGINFSERQFFPIVIIPTNDEQPEMFMREFMVMEGMSLVIDTPILNAADADVPLDDL FT TFTITQFPTHGHIMNQLINGTVLVESFTLDQIIESSSIIYEHDDSETQEDSFVIKLTDG FT KHSVEKTVLIIVIPVDDETPRMTINNGLEIEIGDTKIINNKILMATDLDSEDKSLVYII FT RYGPGHGLLQRRKPTGAFENITLGMNFTQDEVDRNLIQYVHLGQEGIRDLIKFDVTDGI FT NPLIDRYFYVSIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSDLNSPDENLVFTIT FT RAPMRGHLECTDQPGVSITSFTQLQLAGNKIYYIHTADDEVKMDSFEFQVTDGRNPVFR FT TFRISISDVDNKKPVVTIHKLVVSESENKLITPFELTVEDRDTPDKLLKFTITQVPIHG FT HLLFNNTRPVMVFTKQDLNENLISYKHDGTESSEDSFSFTVTDGTHTDFYVFPDTVFET FT RRPQVMKIQVLAVDNSVPQIAVNKGASTLRTLATGHLGFMITSKILKVEDRDSLHISLR FT FIVTEAPQHGYLLNLDKGNHSITQFTQADIDDMKICYVLREGANATSDMFYFAVEDGGG FT NKLTYQNFRLNWAWISFEKEYYLVNEDSKFLDVVLKRRGYLGETSFISIGTRDRTAEKD FT KDFKGKAQKQVQFNPGQTRATWRVRILSDGEHEQSETFQVVLSEPVLAALEFPTVATVE FT IVDPGDEPTVFIPQSKYSVEEDVGELFIPIRRSGDVSQELMVVCYTQQGTATGTVPTSV FT LSYSDYISRPEDHTSVVRFDKDEREKLCRIVIIDDSLYEEEETFHVLLSMPMGGRIGSE FT FPGAQVTIVPDKDDEPIFYFGDVEYSVDESAGYVEVQVWRTGTDLSKSSSVTVRSRKTD FT PPSADAGTDYVGISRNLDFAPGVNMQPVRVVILDDLGQPALEGIEKFELVLRMPMNAAL FT GEPSKATVSINDSVSDLPKMQFKERIYTGSESDGQIVTMIHRTGDVQYRSSVRCYTRQG FT SAQVMMDFEERPNTDTSIITFLPGETEKPCILELMDDVLYEEVEELRLVLGTPQSNSPF FT GAAVGEQNETLIRIRDDADKTVIKFGETKFSVTEPKEPGESVVIRIPVIRQGDTSKVSI FT VRVHTKDGSATSGEDYHPVSEEIEFKEGETQHVVEIEVTFDGVREMREAFTVHLKPDEN FT MIAEMQLTKAIVYIEEMSSMADVTFPSVPQIVSLLMYDDTSKAKESAEPMSGYPVICIT FT ACNPKYSDYDKTGSICASENINDTLTRYRWLISAPAGPDGVTSPMREVDFDTFFTSSKM FT VTLDSIYFQPGSRVQCAARAVNTNGDEGLELMSPIVTISREEGLCQPRVPGVVGAEPFS FT AKLRYTGPEDADYTNLIKLTVTMPHIDGMLPVISTRELSNFELTLSPDGTRVGNHKCSN FT LLDYTEVKTHYGFLTDATKNPEIIGETYPYQYSLSIRGSTTLRFYRNLNLEACLWEFVS FT YYDMSELLADCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLKSEL FT RLTFVYDTAILWNDGIGSPPEAELQGSLYPTSMRIGDEGRLAVHFKTEAQFHGLFVLSH FT PASFTSSVIMSADHPGLTFSLRLIRSEPTYNQPVQQWSFVSDFAVRDYSGTYTVKLVPC FT TAPSHQEYRLPVTCNPREPVTFDLDIRFQQVSDPVAAEFSLNTQMYLLSKKSLWLSDGS FT MGFGQESDVAFAEGDIIYGRVMVDPVQNLGDSFYCSIEKVFLCTGADGYVPKYSPMNAE FT YGCLADSPSLLYRFKIVDKAQPETQATSFGNVLFNAKLAVDDPEAILLVNQPGSDGFKV FT DSTPLFQVALGREWYIHTIYTVRSKDNANRGIGKRSVEYHSLVSQGKPQSTTKSRKKRE FT IRSTPSLAWEIGAENSRGTNIQHIALDRTKRQIPHGRAPPDGILPWELNSPSSAVSLVT FT VVGGTTVGLLTICLTVIAVLMCRGKESFRGKDAPKGSSSSEPMVPPQSHHNDSSEV" FT mRNA join(complement(AC017111.4:78943..84331), FT complement(AC017111.4:73673..73762), FT complement(AC017111.4:7010..7156), FT complement(AC017111.4:1652..1882), FT AL590007.5:137842..137967,AL590007.5:139329..139580, FT 39420710..39420859,39422598..39422807,39424175..39424372, FT 39425081..39425245,39425823..39426005,39430263..39430393, FT 39432012..39432170,39433424..39433727,39435568..39435699, FT 39438412..39438743,39446879..39447071,39448619..39448723, FT 39450159..39450286,39450385..39450519,39451254..39451380, FT 39452271..39452458,39452968..39453114,39454421..39460074) FT /gene="FREM2" FT /locus_tag="RP11-7B3.1-001" FT /product="FRAS1 related extracellular matrix protein 2" FT /note="match: cDNAs: Em:AB236662.1 Em:AJ833643.1 FT Em:BX538150.1 Em:BX538304.1 Em:CR933724.1" FT /note="match: ESTs: Em:AI289430.1 Em:AW236058.1 FT Em:BM983495.1 Em:DA454575.1" FT polyA_signal 39460054..39460059 FT polyA_site 39460074 FT CDS 39476524..39476787 FT /pseudo FT /locus_tag="RP11-7B3.3-001" FT /product="phospholipase A2, group XII (PLA2G12) pseudogene" FT /note="match: proteins: Sw:Q9BZM1 Sw:Q9EPR2" FT CDS complement(join(39496864..39497074,39497650..39497878, FT 39503167..39503290,39505744..39506569,39508399..39508526, FT 39509825..39509876,39510197..39510336)) FT /pseudo FT /locus_tag="RP11-7B3.4-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q5TYW2 Sw:Q9BXX3 Sw:Q9UPS8 FT Tr:O60311 Tr:Q96LT0 Tr:Q9BXX2 Tr:Q9HCD1 Tr:Q9NSI9" FT misc_feature 39517342 FT /note="Clone_right_end: RP11-7B3" FT misc_feature 39523313..39679271 FT /note="annotated region of clone" FT polyA_site complement(39540062) FT polyA_signal complement(39540078..39540083) FT misc_feature 39550249 FT /note="Clone_left_end: RP11-131F1" FT mRNA complement(join(39540062..39541186,39542537..39542671, FT 39544322..39544525,39546649..39546731,39550677..39550749, FT 39550831..39550934,39564807..39565203)) FT /gene="STOML3" FT /locus_tag="RP11-50D16.1-001" FT /product="stomatin (EPB72)-like 3" FT /note="match: ESTs: Em:BU848803.1 Em:CV029445.1 FT Em:DB195868.1 Em:DB348057.1" FT /note="match: cDNAs: Em:BC025760.1" FT CDS complement(join(39540962..39541186,39542537..39542671, FT 39544322..39544525,39546649..39546731,39550677..39550749, FT 39550831..39550934,39564807..39564858)) FT /gene="STOML3" FT /locus_tag="RP11-50D16.1-001" FT /standard_name="OTTHUMP00000018290" FT /product="stomatin (EPB72)-like 3" FT /note="match: proteins: Sw:Q8TAV4.1" FT /protein_id="CAI40973.1" FT /translation="MDSRVSSPEKQDKENFVGVNNKRLGVCGWILFSLSFLLVIITFPI FT SIWMCLKIIKEYERAVVFRLGRIQADKAKGPGLILVLPCIDVFVKVDLRTVTCNIPPQE FT ILTRDSVTTQVDGVVYYRIYSAVSAVANVNDVHQATFLLAQTTLRNVLGTQTLSQILAG FT REEIAHSIQTLLDDATELWGIRVARVEIKDVRIPVQLQRSMAAEAEATREARAKVLAAE FT GEMNASKSLKSASMVLAESPIALQLRYLQTLSTVATEKNSTIVFPLPMNILEGIGGVSY FT DNHKKLPNKA" FT polyA_site complement(39584002) FT polyA_signal complement(39584018..39584023) FT polyA_site complement(39584287) FT polyA_signal complement(39584303..39584308) FT polyA_site complement(39585284) FT polyA_signal complement(39585301..39585306) FT mRNA complement(join(39585513..39585624,39586220..39586612)) FT /gene="C13orf23" FT /locus_tag="RP11-50D16.2-002" FT /product="chromosome 13 open reading frame 23" FT /note="match: ESTs: Em:BF818429.1" FT mRNA complement(join(39585277..39585474,39586220..39586370, FT 39586828..39586915)) FT /gene="C13orf23" FT /locus_tag="RP11-50D16.2-007" FT /product="chromosome 13 open reading frame 23" FT /note="match: ESTs: Em:AI015816.1" FT mRNA complement(join(39584002..39585624,39586220..39586370, FT 39597361..39598067)) FT /gene="C13orf23" FT /locus_tag="RP11-50D16.2-004" FT /product="chromosome 13 open reading frame 23" FT /note="match: ESTs: Em:AU133903.1" FT /note="match: cDNAs: Em:AK024308.1" FT mRNA complement(join(39598614..39598693,39600414..39600609)) FT /gene="C13orf23" FT /locus_tag="RP11-50D16.2-005" FT /product="chromosome 13 open reading frame 23" FT /note="match: ESTs: Em:AW852088.1" FT mRNA complement(join(<39598640..39598693,39600414..39600524, FT 39602364..39602457,39603418..39603512,39605700..39605846)) FT /gene="C13orf23" FT /locus_tag="RP11-50D16.2-006" FT /product="chromosome 13 open reading frame 23" FT /note="match: ESTs: Em:BI029609.1" FT CDS complement(join(<39598640..39598693,39600414..39600524, FT 39602364..39602457,39603418..39603512,39605700..39605816)) FT /gene="C13orf23" FT /locus_tag="RP11-50D16.2-006" FT /standard_name="OTTHUMP00000018293" FT /product="chromosome 13 open reading frame 23" FT /protein_id="CAI40974.1" FT /translation="MFANMLSLELLVLCFQVVDLLRYFSWAEPQLKAMKALQHKMVAVQ FT PTEVVNILNCFTFSKDKLVALELLASNIIDAQNSRPIEDLFRVNMSEKKRCKRILEQAF FT KGGCKAPHAMISSCGTIPGNPYPKGRPSRINGIFPGTPLKKDGEECTNEGKGI" FT mRNA complement(join(39584003..39585624,39586220..39586370, FT 39586828..39588613,39591637..39591681,39596463..39596549, FT 39597189..39597267,39598610..39598693,39600414..39600524, FT 39602364..39602457,39603418..39603512,39605700..39605768, FT 39608268..39608333,39611335..39612213)) FT /gene="C13orf23" FT /locus_tag="RP11-50D16.2-003" FT /product="chromosome 13 open reading frame 23" FT /note="match: ESTs: Em:AW499888.1 Em:BE145290.1 FT Em:BF973556.1 Em:BU193208.1 Em:BX333115.2 Em:CN335916.1 FT Em:CN341881.1 Em:DA875165.1" FT /note="match: cDNAs: Em:AB107354.1 Em:AK074360.1 FT Em:BC064348.1 Em:BX647471.1" FT CDS complement(join(39585502..39585624,39586220..39586370, FT 39586828..39588613,39591637..39591681,39596463..39596549, FT 39597189..39597267,39598610..39598693,39600414..39600524, FT 39602364..39602457,39603418..39603512,39605700..39605768, FT 39608268..39608333,39611335..39611379)) FT /gene="C13orf23" FT /locus_tag="RP11-50D16.2-003" FT /standard_name="OTTHUMP00000018292" FT /product="chromosome 13 open reading frame 23" FT /note="match: proteins: Tr:Q6P2S2.1" FT /protein_id="CAI40975.1" FT /translation="MDKKSFEMVLDEIRKAVLTEYKLKAIEYVHGYFSSEQVVDLLRYF FT SWAEPQLKAMKALQHKMVAVQPTEVVNILNCFTFSKDKLVALELLASNIIDAQNSRPIE FT DLFRVNMSEKKRCKRILEQAFKGGCKAPHAMISSCGTIPGNPYPKGRPSRINGIFPGTP FT LKKDGEECTNEGKGIAARILGPSKPPPSTYNPHKPVPYPIPPCRPHATIAPSAYNNAGL FT VPLANVIAPPPPPYTPNPVGTENEDLSNPSKPIQNQTFSTPASQLFSPHGSNPSTPAAT FT PVPTASPVKAINHPSASAAATVSGMNLLNTVLPVFPGQVSSAVHTPQPSIPNPTVIRTP FT SLPTAPVTSIHSTTTTPVPSIFSGLVSLPGPSATPTAATPTPGPTPRSTLGSSEAFAST FT SAPFTSLPFSTSSSAASTSNPNSASLSSVFAGLPLPLPPTSQGLSNPTPVIAGGSTPSV FT AGPLGVNSPLLSALKGFLTSNDTNLINSSALSSAVTSGLASLSSLTLQNSDSSASAPNK FT CYAPSAIPTPQRTSTPGLALFPGLPSPVANSTSTPLTLPVQSPLATAASASTSVPVSCG FT SSASLLRGPHPGTSDLHISSTPAATTLPVMIKTEPTSPTPSAFKGPSHSGNPSHGTLGL FT SGTLGRAYTSTSVPISLSACLNPALSGLSSLSTPLNGSNPLSSISLPPHGSSTPIAPVF FT TALPSFTSLTNNFPLTGNPSLNPSVSLPGSLIATSSTAATSTSLPHPSSTAAVLSGLSA FT SAPVSAAPFPLNLSTAVPSLFSVTQGPLSSSNPSYPGFSVSNTPSVTPALPSFPGLQAP FT STVAAVTPLPVAATAPSPAPVLPGFASAFSSNFNSALVAQAGLSSGLQAAGSSVFPGLL FT SLPGIPGFPQNPSQSSLQELQHNAAAQSALLQQVHSASALESYPAQPDGFPSYPSAPGT FT PFSLQPSLSQSGWQ" FT mRNA complement(join(<39602364..39602457,39603418..39603512, FT 39605700..39605768,39611335..39611974)) FT /gene="C13orf23" FT /locus_tag="RP11-50D16.2-001" FT /product="chromosome 13 open reading frame 23" FT /note="match: ESTs: Em:AL522407.3 Em:BF110824.1" FT CDS complement(join(<39602364..39602457,39603418..39603512, FT 39605700..39605768,39611335..39611379)) FT /gene="C13orf23" FT /locus_tag="RP11-50D16.2-001" FT /standard_name="OTTHUMP00000018291" FT /product="chromosome 13 open reading frame 23" FT /protein_id="CAI40976.1" FT /translation="MDKKSFEMVLDEIRKVVDLLRYFSWAEPQLKAMKALQHKMVAVQP FT TEVVNILNCFTFSKDKLVALELLASNIIDAQNSRPIEDLFRVNMSEKKRCKRILEQ" FT mRNA join(39612455..39612860,39613273..39613425, FT 39613701..39613848,39616242..39616442,39618227..39618318, FT 39621177..39621289,39621811..39624246) FT /locus_tag="RP11-50D16.3-005" FT /product="novel protein" FT /note="match: ESTs: Em:AA056762.1 Em:AA307225.1 FT Em:AA628063.1 Em:AA765507.1 Em:AA916242.1 Em:AA962570.1 FT Em:AI000008.1 Em:AI129587.1 Em:AI928199.1 Em:AI962506.1 FT Em:AL536879.1 Em:AV252695.2 Em:AV688972.1 Em:AW299270.1 FT Em:AW370820.1 Em:AW974652.1 Em:BB614540.1 Em:BE708029.1 FT Em:BF820514.1 Em:BF946218.1 Em:BG385063.1 Em:BI027058.1 FT Em:BI437822.1 Em:BI766947.1 Em:BM456453.1 Em:BM803298.1" FT mRNA join(39612455..39612860,39613273..39613425, FT 39613701..39614058,39624951..39625205) FT /locus_tag="RP11-50D16.3-006" FT /product="novel protein" FT /note="match: ESTs: Em:AL523331.1" FT mRNA join(39612510..39612602,39613273..39613425, FT 39613701..39613848,39616242..39616432) FT /locus_tag="RP11-50D16.3-001" FT /product="novel protein" FT /note="match: ESTs: Em:BG719308.1" FT CDS join(39612777..39612860,39613273..39613425, FT 39613701..39613848,39616242..39616442,39618227..39618318, FT 39621177..39621289,39621811..39622063) FT /locus_tag="RP11-50D16.3-005" FT /standard_name="OTTHUMP00000018294" FT /product="novel protein" FT /protein_id="CAI40978.1" FT /translation="MARFWVCVAGAGFFLAFLVLHSRFCGSPVLRNFTFAVSWRTEKIL FT YRLDVGWPKHPEYFTGTTFCVAVDSLNGLVYIGQRGDNIPKILVFTEDGYFLRAWNYTV FT DTPHGIFAASTLYEQSVWITDVGSGFFGHTVKKYSSFGDLVQVLGTPGKKGTSLNPLQF FT DNPAELYVEDTGDIYIVDGDGGLNNRLIKLSQDFMILWLHGENGTGPAKFNIPHSVTLD FT SAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLSR FT LSVVAAPPVGSIGECSVISTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNS FT YVPSFGS" FT mRNA join(39613285..39613425,39616242..39616442, FT 39618227..39618318,39621177..39621268) FT /locus_tag="RP11-50D16.3-002" FT /product="novel protein" FT /note="match: ESTs: Em:BI341432.1" FT mRNA join(39613360..39613425,39613701..39614157) FT /locus_tag="RP11-50D16.3-003" FT /product="novel protein" FT /note="match: ESTs: Em:AI276164.1 Em:H96515.1 Em:N25548.1 FT Em:N34494.1" FT mRNA join(39616195..39616442,39618227..39618601) FT /locus_tag="RP11-50D16.3-004" FT /product="novel protein" FT /note="match: ESTs: Em:AV713792.1 Em:BG432007.1" FT polyA_signal 39624219..39624224 FT polyA_site 39624241 FT misc_feature 39677273 FT /note="Clone_right_end: RP11-50D16" FT misc_feature 39683400..39683422 FT /note="Sequence from overlapping clone bA466M19.Assembly FT confirmed by restriction digest" FT misc_feature 39705532 FT /note="Clone_left_end: RP11-527F15" FT misc_feature 39710497 FT /note="Clone_right_end: RP11-131F1" FT misc_feature complement(39710598..39846116) FT /note="annotated region of clone" FT CDS complement(39743773..39744088) FT /pseudo FT /locus_tag="RP11-527F15.1-001" FT /product="NTF2-like export factor 1 (NXT1) pseudogene" FT /note="match: proteins: Sw:Q9NPJ8 Sw:Q9QZV9 Sw:Q9UKK6" FT polyA_signal complement(39743578..39743583) FT misc_feature complement(39710697) FT /note="Clone_right_end: RP11-186J16" FT misc_feature 39846117..39930702 FT /note="annotated region of clone" FT misc_feature 39861408 FT /note="Clone_right_end: RP11-527F15" FT misc_feature 39887516..39887524 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS complement(join(39918073..39918191, FT AL158194.16:23863..23961,AL136358.13:69348..69732)) FT /gene="LHFP" FT /locus_tag="RP11-186J16.1-001" FT /standard_name="OTTHUMP00000018296" FT /product="lipoma HMGIC fusion partner" FT /note="match: proteins: Sw:Q5BJS2.1 Sw:Q8BM86.1 FT Sw:Q9Y693.1" FT /protein_id="CAH71055.1" FT /translation="MASSLTCTGVIWALLSFLCAATSCVGFFMPYWLWGSQLGKPVSFG FT TFRRCSYPVHDESRQMMVMVEECGRYASFQGIPSAEWRICTIVTGLGCGLLLLVALTAL FT MGCCVSDLISRTVGRVAGGIQFLGGLLIGAGCALYPLGWDSEEVRQTCGYTSGQFDLGK FT CEIGWAYYCTGAGATAAMLLCTWLACFSGKKQKHYPY" FT polyA_site complement(39917029) FT polyA_signal complement(39917047..39917052) FT mRNA complement(join(39917029..39918191, FT AL158194.16:23863..23961,AL136358.13:69348..69906, FT AL136358.13:71399..71687)) FT /gene="LHFP" FT /locus_tag="RP11-186J16.1-001" FT /product="lipoma HMGIC fusion partner" FT /note="match: cDNAs: Em:AF098807.1 Em:AL137388.1 FT Em:BC017824.1" FT /note="match: ESTs: Em:BU194683.1 Em:BX439791.2 FT Em:CX872531.1" FT polyA_site complement(39917863) FT polyA_signal complement(39917881..39917886) FT misc_feature 39919518..39919545 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 39928603 FT /note="Clone_left_end: RP11-429E17" FT misc_feature 39930703..40105721 FT /note="annotated region of clone" FT CDS complement(join(AL138685.21:72057..72175, FT 39952565..39952663,AL136358.13:69348..69732)) FT /gene="LHFP" FT /locus_tag="RP11-186J16.1-001" FT /standard_name="OTTHUMP00000018296" FT /product="lipoma HMGIC fusion partner" FT /note="match: proteins: Sw:Q5BJS2.1 Sw:Q8BM86.1 FT Sw:Q9Y693.1" FT /protein_id="CAH73751.1" FT /translation="MASSLTCTGVIWALLSFLCAATSCVGFFMPYWLWGSQLGKPVSFG FT TFRRCSYPVHDESRQMMVMVEECGRYASFQGIPSAEWRICTIVTGLGCGLLLLVALTAL FT MGCCVSDLISRTVGRVAGGIQFLGGLLIGAGCALYPLGWDSEEVRQTCGYTSGQFDLGK FT CEIGWAYYCTGAGATAAMLLCTWLACFSGKKQKHYPY" FT mRNA complement(join(AL138685.21:71013..72175, FT 39952565..39952663,AL136358.13:69348..69906, FT AL136358.13:71399..71687)) FT /gene="LHFP" FT /locus_tag="RP11-186J16.1-001" FT /product="lipoma HMGIC fusion partner" FT /note="match: cDNAs: Em:AF098807.1 Em:AL137388.1 FT Em:BC017824.1" FT /note="match: ESTs: Em:BU194683.1 Em:BX439791.2 FT Em:CX872531.1" FT misc_feature 40010622 FT /note="Clone_right_end: RP11-186J16" FT misc_feature 40060372 FT /note="Clone_left_end: RP11-183L8" FT misc_feature 40103721 FT /note="Clone_right_end: RP11-429E17" FT misc_feature 40105722..40226128 FT /note="annotated region of clone" FT CDS complement(join(AL138685.21:72057..72175, FT AL158194.16:23863..23961,40174969..40175353)) FT /gene="LHFP" FT /locus_tag="RP11-186J16.1-001" FT /standard_name="OTTHUMP00000018296" FT /product="lipoma HMGIC fusion partner" FT /note="match: proteins: Sw:Q5BJS2.1 Sw:Q8BM86.1 FT Sw:Q9Y693.1" FT /protein_id="CAC39629.2" FT /translation="MASSLTCTGVIWALLSFLCAATSCVGFFMPYWLWGSQLGKPVSFG FT TFRRCSYPVHDESRQMMVMVEECGRYASFQGIPSAEWRICTIVTGLGCGLLLLVALTAL FT MGCCVSDLISRTVGRVAGGIQFLGGLLIGAGCALYPLGWDSEEVRQTCGYTSGQFDLGK FT CEIGWAYYCTGAGATAAMLLCTWLACFSGKKQKHYPY" FT mRNA complement(join(AL138685.21:71013..72175, FT AL158194.16:23863..23961,40174969..40175527, FT 40177020..40177308)) FT /gene="LHFP" FT /locus_tag="RP11-186J16.1-001" FT /product="lipoma HMGIC fusion partner" FT /note="match: cDNAs: Em:AF098807.1 Em:AL137388.1 FT Em:BC017824.1" FT /note="match: ESTs: Em:BU194683.1 Em:BX439791.2 FT Em:CX872531.1" FT mRNA complement(join(40175450..40175527,40177020..40177170, FT 40177449..40177665)) FT /gene="LHFP" FT /locus_tag="RP11-186J16.1-002" FT /product="lipoma HMGIC fusion partner" FT /note="match: ESTs: Em:AV727691.1" FT misc_feature 40226028 FT /note="Clone_right_end: RP11-183L8" FT misc_feature 40226129..40343550 FT /note="annotated region of clone" FT CDS join(<40229799..40230016,40233501..40233644, FT 40234947..40235018,40239233..40239291,40251605..40251716, FT 40253675..40253757,40254112..40254182,40256308..40256401, FT 40261640..40261768,40261845..40261936,40263897..40263961, FT 40268771..40268862,40273638..40273755,40293373..40293504, FT 40293797..40293964,40297470..40297577,40298645..40298698, FT 40301606..40301685,AL596306.4:20922..20943) FT /codon_start=3 FT /gene="COG6" FT /locus_tag="RP11-304M3.3-001" FT /standard_name="OTTHUMP00000018297" FT /product="component of oligomeric golgi complex 6" FT /note="match: proteins: Sw:Q9Y2V7" FT /protein_id="CAI16936.1" FT /translation="SRCLRGPCLAEVAAGGGTRSAMAEGSGEVVAVSATGAANGLNNGA FT GGTSATTCNPLSRKLHKILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKS FT LAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSE FT SQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLR FT TNQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQESCDVSPVLTQAMEALQDRPV FT LYKYTLDEFGTARRSTVVRGFIDALTRGGPGGTPRPIEMHSHDPLRYVGDMLAWLHQAT FT ASEKEHLEALLKHVTTQGVEENIQEVVGHITEGVCRPLKVRIEQVIVAEPGAVLLYKIS FT NLLKFYHHTISGIVGNSATALLTTIEEMHLLSKKIFFNSLSLHASKLMDKVELPPPDLG FT PSSALNQTLMLLREVLASHDSSVVPLDARQADFVQVLSCVLDPLLQMCTVSASNLGTAD FT MATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHLDTLINEQASYVLTRVGLSYIYN FT TVQQHKPEQGSLANMPNLDSVTLKAAMVQFDRYLSAPDNLLIPQLNFLLSATVKRPPNG FT P" FT mRNA join(<40229799..40230016,40233501..40233644, FT 40234947..40235018,40239233..40239291,40251605..40251716, FT 40253675..40253757,40254112..40254182,40256308..40256401, FT 40261640..40261768,40261845..40261936,40263897..40263961, FT 40268771..40268862,40273638..40273755,40293373..40293504, FT 40293797..40293964,40297470..40297577,40298645..40298698, FT 40301606..40301685,AL596306.4:20922..24252) FT /gene="COG6" FT /locus_tag="RP11-304M3.3-001" FT /product="component of oligomeric golgi complex 6" FT /note="match: ESTs: Em:AW500299 Em:BB296654 Em:BB620412 FT Em:BB650303 Em:BE632112 Em:BF318915 Em:BI457596 Em:BI463631 FT Em:BI547815 Em:BQ068185" FT /note="match: cDNAs: Em:AB032960" FT mRNA join(40229814..40230016,40233501..40233644, FT 40234947..40235018,40239233..40239291,40251605..40251716, FT 40253675..40253757,40254112..40254182,40256308..40256401, FT 40261640..40261768,40261845..40261936,40263897..40263961, FT 40268771..40268862,40273638..40273755,40293373..40293504, FT 40293797..40293964,40297470..40297577,40298645..40298698, FT 40301606..40301685,40325083..40326633) FT /gene="COG6" FT /locus_tag="RP11-304M3.3-002" FT /product="component of oligomeric golgi complex 6" FT /note="match: ESTs: Em:BE887146.1 Em:CD644124.1 FT Em:DA012577.1 Em:DR002395.1 Em:Z42987.1" FT /note="match: cDNAs: Em:BC051723.1 Em:CR627406.1" FT CDS join(40229864..40230016,40233501..40233644, FT 40234947..40235018,40239233..40239291,40251605..40251716, FT 40253675..40253757,40254112..40254182,40256308..40256401, FT 40261640..40261768,40261845..40261936,40263897..40263961, FT 40268771..40268862,40273638..40273755,40293373..40293504, FT 40293797..40293964,40297470..40297577,40298645..40298698, FT 40301606..40301685,40325083..40325230) FT /gene="COG6" FT /locus_tag="RP11-304M3.3-002" FT /standard_name="OTTHUMP00000018298" FT /product="component of oligomeric golgi complex 6" FT /note="match: proteins: Tr:Q3SZI7.1 Tr:Q68FP9.1 Tr:Q6AI19.1 FT Tr:Q86V49.1 Tr:Q8BSN7.1" FT /protein_id="CAM23735.1" FT /translation="MAEGSGEVVAVSATGAANGLNNGAGGTSATTCNPLSRKLHKILET FT RLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESI FT SEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLT FT SDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETA FT YERLYRWAQSECRTLTQESCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGF FT IDALTRGGPGGTPRPIEMHSHDPLRYVGDMLAWLHQATASEKEHLEALLKHVTTQGVEE FT NIQEVVGHITEGVCRPLKVRIEQVIVAEPGAVLLYKISNLLKFYHHTISGIVGNSATAL FT LTTIEEMHLLSKKIFFNSLSLHASKLMDKVELPPPDLGPSSALNQTLMLLREVLASHDS FT SVVPLDARQADFVQVLSCVLDPLLQMCTVSASNLGTADMATFMVNSLYMMKTTLALFEF FT TDRRLEMLQFQIEAHLDTLINEQASYVLTRVGLSYIYNTVQQHKPEQGSLANMPNLDSV FT TLKAAMVQFDRYLSAPDNLLIPQLNFLLSATVKEQIVKQSTELVCRAYGEVYAAVMNPI FT NEYKDPENILHRSPQQVQTLLS" FT mRNA join(40229881..40230016,40230963..40231027, FT 40233501..40233644,40234947..40235018,40239233..40239291, FT 40251605..40251716,40253675..40253757,40254112..40254182, FT 40256308..40256401,40261640..40261768,40261845..40261936, FT 40263897..40263961,40268771..40268862,40273638..40273755, FT 40293373..40293504,40293797..40293964,40297470..40297577, FT 40298645..40298698,40301606..40301685,40325083..40326637) FT /gene="COG6" FT /locus_tag="RP11-304M3.3-003" FT /product="component of oligomeric golgi complex 6" FT /note="match: ESTs: Em:AL599284" FT /note="match: cDNAs: Em:AF116827" FT CDS join(40233504..40233644,40234947..40235018, FT 40239233..40239291,40251605..40251716,40253675..40253757, FT 40254112..40254182,40256308..40256401,40261640..40261768, FT 40261845..40261936,40263897..40263961,40268771..40268862, FT 40273638..40273755,40293373..40293504,40293797..40293964, FT 40297470..40297577,40298645..40298698,40301606..40301685, FT 40325083..40325230) FT /gene="COG6" FT /locus_tag="RP11-304M3.3-003" FT /standard_name="OTTHUMP00000018299" FT /product="component of oligomeric golgi complex 6" FT /note="match: proteins: Sw:Q8R3I3.1 Sw:Q9Y2V7.1" FT /protein_id="CAI16937.1" FT /translation="MLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEV FT KEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAF FT LSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQM FT ALLQETAYERLYRWAQSECRTLTQESCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARR FT STVVRGFIDALTRGGPGGTPRPIEMHSHDPLRYVGDMLAWLHQATASEKEHLEALLKHV FT TTQGVEENIQEVVGHITEGVCRPLKVRIEQVIVAEPGAVLLYKISNLLKFYHHTISGIV FT GNSATALLTTIEEMHLLSKKIFFNSLSLHASKLMDKVELPPPDLGPSSALNQTLMLLRE FT VLASHDSSVVPLDARQADFVQVLSCVLDPLLQMCTVSASNLGTADMATFMVNSLYMMKT FT TLALFEFTDRRLEMLQFQIEAHLDTLINEQASYVLTRVGLSYIYNTVQQHKPEQGSLAN FT MPNLDSVTLKAAMVQFDRYLSAPDNLLIPQLNFLLSATVKEQIVKQSTELVCRAYGEVY FT AAVMNPINEYKDPENILHRSPQQVQTLLS" FT mRNA join(40253733..40254182,40256308..40256610) FT /gene="COG6" FT /locus_tag="RP11-304M3.3-004" FT /product="component of oligomeric golgi complex 6" FT /note="match: ESTs: Em:BG740666.1" FT mRNA join(40261680..40261936,40263897..40263957) FT /gene="COG6" FT /locus_tag="RP11-304M3.3-005" FT /product="component of oligomeric golgi complex 6" FT /note="match: ESTs: Em:AA326384.1" FT polyA_signal 40326747..40326752 FT polyA_site 40326766 FT misc_feature 40343450 FT /note="Clone_right_end: RP11-87H20" FT misc_feature 40343551..40410577 FT /note="annotated region of clone" FT CDS join(AL512505.8:<3771..3988,AL512505.8:7473..7616, FT AL512505.8:8919..8990,AL512505.8:13205..13263, FT AL512505.8:25577..25688,AL512505.8:27647..27729, FT AL512505.8:28084..28154,AL512505.8:30280..30373, FT AL512505.8:35612..35740,AL512505.8:35817..35908, FT AL512505.8:37869..37933,AL512505.8:42743..42834, FT AL512505.8:47610..47727,AL512505.8:67345..67476, FT AL512505.8:67769..67936,AL512505.8:71442..71549, FT AL512505.8:72617..72670,AL512505.8:75578..75657, FT 40362472..40362493) FT /codon_start=3 FT /gene="COG6" FT /locus_tag="RP11-304M3.3-001" FT /standard_name="OTTHUMP00000018297" FT /product="component of oligomeric golgi complex 6" FT /note="match: proteins: Sw:Q9Y2V7" FT /protein_id="CAH72240.1" FT /translation="SRCLRGPCLAEVAAGGGTRSAMAEGSGEVVAVSATGAANGLNNGA FT GGTSATTCNPLSRKLHKILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKS FT LAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSE FT SQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLR FT TNQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQESCDVSPVLTQAMEALQDRPV FT LYKYTLDEFGTARRSTVVRGFIDALTRGGPGGTPRPIEMHSHDPLRYVGDMLAWLHQAT FT ASEKEHLEALLKHVTTQGVEENIQEVVGHITEGVCRPLKVRIEQVIVAEPGAVLLYKIS FT NLLKFYHHTISGIVGNSATALLTTIEEMHLLSKKIFFNSLSLHASKLMDKVELPPPDLG FT PSSALNQTLMLLREVLASHDSSVVPLDARQADFVQVLSCVLDPLLQMCTVSASNLGTAD FT MATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHLDTLINEQASYVLTRVGLSYIYN FT TVQQHKPEQGSLANMPNLDSVTLKAAMVQFDRYLSAPDNLLIPQLNFLLSATVKRPPNG FT P" FT mRNA join(AL512505.8:<3771..3988,AL512505.8:7473..7616, FT AL512505.8:8919..8990,AL512505.8:13205..13263, FT AL512505.8:25577..25688,AL512505.8:27647..27729, FT AL512505.8:28084..28154,AL512505.8:30280..30373, FT AL512505.8:35612..35740,AL512505.8:35817..35908, FT AL512505.8:37869..37933,AL512505.8:42743..42834, FT AL512505.8:47610..47727,AL512505.8:67345..67476, FT AL512505.8:67769..67936,AL512505.8:71442..71549, FT AL512505.8:72617..72670,AL512505.8:75578..75657, FT 40362472..40365802) FT /gene="COG6" FT /locus_tag="RP11-304M3.3-001" FT /product="component of oligomeric golgi complex 6" FT /note="match: cDNAs: Em:AB032960" FT /note="match: ESTs: Em:AW500299 Em:BB296654 Em:BB620412 FT Em:BB650303 Em:BE632112 Em:BF318915 Em:BI457596 Em:BI463631 FT Em:BI547815 Em:BQ068185" FT CDS complement(40391880..40392186) FT /pseudo FT /locus_tag="RP11-304M3.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q96HQ2 Tr:Q9D211" FT misc_feature 40406578 FT /note="Clone_left_end: RP11-407E23" FT misc_feature 40495269 FT /note="Clone_left_end: RP11-175I15" FT misc_feature 40550357 FT /note="Clone_left_end: RP11-427J23" FT misc_feature 40598144 FT /note="Clone_right_end: RP11-407E23" FT misc_feature 40632056 FT /note="Clone_left_end: RP11-518D7" FT misc_feature 40701522 FT /note="Clone_right_end: RP11-427J23" FT misc_feature 40701623..40802682 FT /note="annotated region of clone" FT mRNA join(40755946..40755999,40760283..40760390, FT 40762058..40762159,40762596..40763165) FT /locus_tag="RP11-518D7.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BE789257" FT misc_feature 40783488 FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 90bp from restriction digest data and FT spanning pUC clone" FT misc_feature 40785451..40785512 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 40785513..40785549 FT /note="Single clone region. Sequence from uni-directional FT dGTP big dye terminator reads only. Assembly consistent FT with restriction digest data" FT misc_feature 40785757..40785909 FT /note="Single clone region. Sequence from uni-directional FT dGTP big dye terminator reads only. Assembly consistent FT with restriction digest data" FT misc_feature 40785910..40786498 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 40786499..40786705 FT /note="Single clone region. Sequence from uni-directional FT dGTP big dye terminator reads only. Assembly confirmed by FT restriction digest data" FT misc_feature 40786706 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 960bp by restriction digest data" FT misc_feature 40786707..40786731 FT /note="Single clone region. Assembly consistent with FT restriction digest data" FT misc_feature 40798683 FT /note="Clone_left_end: RP11-172E9" FT misc_feature 40802683..40949253 FT /note="annotated region of clone" FT misc_feature 40814142 FT /note="Clone_left_end: RP11-83P2" FT misc_feature 40814147 FT /note="Clone_right_end: RP11-518D7" FT misc_feature 40917956 FT /note="Clone_left_end: RP11-350A18" FT mRNA complement(join(40918094..40918342,40924246..40924440)) FT /locus_tag="RP11-172E9.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BE389152.1" FT misc_feature 40947253 FT /note="Clone_right_end: RP11-172E9" FT misc_feature 40949254..41090781 FT /note="annotated region of clone" FT misc_feature 41006021 FT /note="Clone_right_end: RP11-83P2" FT misc_feature 41012745 FT /note="Clone_left_end: RP11-89L15" FT mRNA complement(join(41026794..41026848,41034419..41034546)) FT /locus_tag="RP11-350A18.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BF807895.1" FT mRNA complement(join(41025131..41025340,41034419..41034543, FT 41044133..41044299,41048131..41048232,41055046..41055143)) FT /locus_tag="RP11-350A18.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI520193 Em:BI520831" FT misc_feature 41090681 FT /note="Clone_right_end: RP11-350A18" FT misc_feature 41090782..41172543 FT /note="annotated region of clone" FT polyA_site complement(41129801) FT polyA_signal complement(41129829..41129834) FT mRNA complement(join(41134896..41134997,41136826..41136901)) FT /gene="FOXO1A" FT /locus_tag="RP11-89L15.1-002" FT /product="forkhead box O1A" FT /note="match: ESTs: Em:AI475740.1" FT mRNA complement(join(41129817..41133171,41133646..41134997, FT AL355132.19:60260..61274)) FT /gene="FOXO1A" FT /locus_tag="RP11-89L15.1-001" FT /product="forkhead box O1A" FT /note="match: cDNAs: Em:AF032885.1 Em:BC021981.2 FT Em:BC070065.1 Em:BT007455.1 Em:U02310.1" FT /note="match: ESTs: Em:AI813640.1 Em:BM678665.1" FT CDS complement(join(41133660..41134997, FT AL355132.19:60260..60889)) FT /gene="FOXO1A" FT /locus_tag="RP11-89L15.1-001" FT /standard_name="OTTHUMP00000018301" FT /product="forkhead box O1A" FT /note="match: proteins: Sw:Q12778.1 Tr:Q5VYC7.1" FT /protein_id="CAI16970.1" FT /translation="MAEAPQVVEIDPDFEPLPRPRSCTWPLPRPEFSQSNSATSSPAPS FT GSAAANPDAAAGLPSASAAAVSADFMSNLSLLEESEDFPQAPGSVAAAVAAAAAAAATG FT GLCGDFQGPEAGCLHPAPPQPPPPGPLSQHPPVPPAAAGPLAGQPRKSSSSRRNAWGNL FT SYADLITKAIESSAEKRLTLSQIYEWMVKSVPYFKDKGDSNSSAGWKNSIRHNLSLHSK FT FIRVQNEGTGKSSWWMLNPEGGKSGKSPRRRAASMDNNSKFAKSRSRAAKKKASLQSGQ FT EGAGDSPGSQFSKWPASPGSHSNDDFDNWSTFRPRTSSNASTISGRLSPIMTEQDDLGE FT GDVHSMVYPPSAAKMASTLPSLSEISNPENMENLLDNLNLLSSPTSLTVSTQSSPGTMM FT QQTPCYSFAPPNTSLNSPSPNYQKYTYGQSSMSPLPQMPIQTLQDNKSSYGGMSQYNCA FT PGLLKELLTSDSPPHNDIMTPVDPGVAQPNSRVLGQNVMMGPNSVMSTYGSQASHNKMM FT NPSSHTHPGHAQQTSAVNGRPLPHTVSTMPHTSGMNRLTQVKTPVQVPLPHPMQMSALG FT GYSSVSSCNGYGRMGLLHQEKLPSDLDGMFIERLDCDMESIIRNDLMDGDTLDFNFDNV FT LPNQSFPHSVKTTTHSWVSG" FT misc_feature 41172443 FT /note="Clone_right_end: RP11-89L15" FT misc_feature 41172544..41181460 FT /note="annotated region of clone" FT misc_feature 41177461 FT /note="Clone_left_end: RP11-181D10" FT misc_feature 41181461..41330721 FT /note="annotated region of clone" FT CDS join(41192875..41193135,41193461..41194639, FT 41195246..41195485) FT /pseudo FT /locus_tag="RP11-181D10.2-001" FT /product="ring finger protein 12 (RNF12) pseudogene" FT /note="match: proteins: Sw:Q9NVW2 Sw:Q9WTV7 Tr:Q91X19 FT Tr:Q9CYY2 Tr:Q9W677" FT mRNA complement(join(41303440..41303737,41323274..41323417, FT 41328155..41328228,AL161614.16:2288..2428, FT AL161614.16:4363..4521,AL161614.16:12161..12448, FT AL161614.16:16400..16588)) FT /gene="MRPS31" FT /locus_tag="RP11-181D10.3-001" FT /product="mitochondrial ribosomal protein S31" FT /note="match: cDNAs: Em:BC022045.1 Em:CR610235.1 FT Em:CR614348.1 Em:Z68747.1" FT /note="match: ESTs: Em:AA947589.1 Em:AL525614.3 FT Em:BG615880.1" FT CDS complement(join(41303508..41303737,41323274..41323417, FT 41328155..41328228,AL161614.16:2288..2428, FT AL161614.16:4363..4521,AL161614.16:12161..12448, FT AL161614.16:16400..16551)) FT /gene="MRPS31" FT /locus_tag="RP11-181D10.3-001" FT /standard_name="OTTHUMP00000018305" FT /product="mitochondrial ribosomal protein S31" FT /note="match: proteins: Sw:Q92665.3" FT /protein_id="CAH70977.1" FT /translation="MFPRVSTFLPLRPLSRHPLSSGSPETSAAAIMLLTVRHGTVRYRS FT SALLARTKNNIQRYFGTNSVICSKKDKQSVRTEETSKETSESQDSEKENTKKDLLGIIK FT GMKVELSTVNVRTTKPPKRRPLKSLEATLGRLRRATEYAPKKRIEPLSPELVAAASAVA FT DSLPFDKQTTKSELLSQLQQHEEESRAQRDAKRPKISFSNIISDMKVARSATARVRSRP FT ELRIQFDEGYDNYPGQEKTDDLKKRKNIFTGKRLNIFDMMAVTKEAPETDTSPSLWDVE FT FAKQLATVNEQPLQNGFEELIQWTKEGKLWEFPINNEAGFDDDGSEFHEHIFLEKHLES FT FPKQGPIRHFMELVTCGLSKNPYLSVKQKVEHIEWFRNYFNEKKDILKESNIQFN" FT misc_feature 41238291..41238458 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(AL133318.11:39136..42490, FT AL133318.11:42965..44316,41239720..41240734)) FT /gene="FOXO1A" FT /locus_tag="RP11-89L15.1-001" FT /product="forkhead box O1A" FT /note="match: cDNAs: Em:AF032885.1 Em:BC021981.2 FT Em:BC070065.1 Em:BT007455.1 Em:U02310.1" FT /note="match: ESTs: Em:AI813640.1 Em:BM678665.1" FT CDS complement(join(AL133318.11:42979..44316, FT 41239720..41240349)) FT /gene="FOXO1A" FT /locus_tag="RP11-89L15.1-001" FT /standard_name="OTTHUMP00000018301" FT /product="forkhead box O1A" FT /note="match: proteins: Sw:Q12778.1 Tr:Q5VYC7.1" FT /protein_id="CAH70978.1" FT /translation="MAEAPQVVEIDPDFEPLPRPRSCTWPLPRPEFSQSNSATSSPAPS FT GSAAANPDAAAGLPSASAAAVSADFMSNLSLLEESEDFPQAPGSVAAAVAAAAAAAATG FT GLCGDFQGPEAGCLHPAPPQPPPPGPLSQHPPVPPAAAGPLAGQPRKSSSSRRNAWGNL FT SYADLITKAIESSAEKRLTLSQIYEWMVKSVPYFKDKGDSNSSAGWKNSIRHNLSLHSK FT FIRVQNEGTGKSSWWMLNPEGGKSGKSPRRRAASMDNNSKFAKSRSRAAKKKASLQSGQ FT EGAGDSPGSQFSKWPASPGSHSNDDFDNWSTFRPRTSSNASTISGRLSPIMTEQDDLGE FT GDVHSMVYPPSAAKMASTLPSLSEISNPENMENLLDNLNLLSSPTSLTVSTQSSPGTMM FT QQTPCYSFAPPNTSLNSPSPNYQKYTYGQSSMSPLPQMPIQTLQDNKSSYGGMSQYNCA FT PGLLKELLTSDSPPHNDIMTPVDPGVAQPNSRVLGQNVMMGPNSVMSTYGSQASHNKMM FT NPSSHTHPGHAQQTSAVNGRPLPHTVSTMPHTSGMNRLTQVKTPVQVPLPHPMQMSALG FT GYSSVSSCNGYGRMGLLHQEKLPSDLDGMFIERLDCDMESIIRNDLMDGDTLDFNFDNV FT LPNQSFPHSVKTTTHSWVSG" FT misc_feature 41285482 FT /note="Clone_left_end: RP11-251C7" FT polyA_site complement(41303432) FT polyA_signal complement(41303453..41303458) FT misc_feature 41310484 FT /note="Clone_right_end: RP11-14H2" FT mRNA complement(join(41303432..41303737,41323274..41323749)) FT /gene="MRPS31" FT /locus_tag="RP11-181D10.3-004" FT /product="mitochondrial ribosomal protein S31" FT /note="match: ESTs: Em:AA461355 Em:AW274392 Em:BQ002789 FT Em:W79354" FT mRNA complement(join(41303510..41303737,41323274..41323417, FT 41326409..41326543)) FT /gene="MRPS31" FT /locus_tag="RP11-181D10.3-003" FT /product="mitochondrial ribosomal protein S31" FT /note="match: cDNAs: Em:BM142076" FT misc_feature 41328721 FT /note="Clone_right_end: RP11-181D10" FT misc_feature 41330722..41399667 FT /note="annotated region of clone" FT misc_feature 41343134..41343298 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(41333138..41333242,41340882..41341169, FT 41344885..41345079)) FT /gene="MRPS31" FT /locus_tag="RP11-181D10.3-002" FT /product="mitochondrial ribosomal protein S31" FT /note="match: ESTs: Em:BM693777" FT mRNA complement(join(AL355132.19:123980..124277, FT AL355132.19:143814..143957,AL355132.19:148695..148768, FT 41331009..41331149,41333084..41333242,41340882..41341169, FT 41345121..41345309)) FT /gene="MRPS31" FT /locus_tag="RP11-181D10.3-001" FT /product="mitochondrial ribosomal protein S31" FT /note="match: ESTs: Em:AA947589.1 Em:AL525614.3 FT Em:BG615880.1" FT /note="match: cDNAs: Em:BC022045.1 Em:CR610235.1 FT Em:CR614348.1 Em:Z68747.1" FT CDS complement(join(AL355132.19:124048..124277, FT AL355132.19:143814..143957,AL355132.19:148695..148768, FT 41331009..41331149,41333084..41333242,41340882..41341169, FT 41345121..41345272)) FT /gene="MRPS31" FT /locus_tag="RP11-181D10.3-001" FT /standard_name="OTTHUMP00000018305" FT /product="mitochondrial ribosomal protein S31" FT /note="match: proteins: Sw:Q92665.3" FT /protein_id="CAH72771.1" FT /translation="MFPRVSTFLPLRPLSRHPLSSGSPETSAAAIMLLTVRHGTVRYRS FT SALLARTKNNIQRYFGTNSVICSKKDKQSVRTEETSKETSESQDSEKENTKKDLLGIIK FT GMKVELSTVNVRTTKPPKRRPLKSLEATLGRLRRATEYAPKKRIEPLSPELVAAASAVA FT DSLPFDKQTTKSELLSQLQQHEEESRAQRDAKRPKISFSNIISDMKVARSATARVRSRP FT ELRIQFDEGYDNYPGQEKTDDLKKRKNIFTGKRLNIFDMMAVTKEAPETDTSPSLWDVE FT FAKQLATVNEQPLQNGFEELIQWTKEGKLWEFPINNEAGFDDDGSEFHEHIFLEKHLES FT FPKQGPIRHFMELVTCGLSKNPYLSVKQKVEHIEWFRNYFNEKKDILKESNIQFN" FT misc_feature 41357835..41358104 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA join(41363548..41363799,41367294..41367417, FT 41373193..41373451,41376271..41376436,41379254..41379391, FT 41381430..41381599,41382574..41382606) FT /gene="SLC25A15" FT /locus_tag="RP11-346L13.4-004" FT /product="solute carrier family 25 (mitochondrial carrier; FT ornithine transporter) member 15" FT /note="match: ESTs: Em:BE164680 Em:BI461478" FT mRNA join(41363632..41363799,41367294..41367417, FT 41373193..41373451,41379254..41379391,41381430..41381599, FT 41382574..41382732,41383679..41384287,41385486..41386596) FT /gene="SLC25A15" FT /locus_tag="RP11-346L13.4-003" FT /product="solute carrier family 25 (mitochondrial carrier; FT ornithine transporter) member 15" FT /note="match: ESTs: Em:AL538057 Em:AW106249 Em:BE091273 FT Em:BE384292 Em:BE787948 Em:BG772040 Em:BI550021 Em:BI827925 FT Em:BI918456 Em:BM542295 Em:BM560182 Em:BQ014130 Em:BQ062125 FT Em:BQ430027" FT /note="match: cDNAs: Em:AF112968 Em:AF177333 Em:BC002702" FT mRNA join(41363633..41363799,41367294..41367417, FT 41373193..41373451,41379254..41379391,41381430..41381599, FT 41382574..41382732,41383679..41384247) FT /gene="SLC25A15" FT /locus_tag="RP11-346L13.4-005" FT /product="solute carrier family 25 (mitochondrial carrier; FT ornithine transporter) member 15" FT /note="match: cDNAs: Em:AF177333.1 Em:BC002702.2" FT mRNA join(41367294..41367417,41373193..41373451, FT 41381430..>41381514) FT /gene="SLC25A15" FT /locus_tag="RP11-346L13.4-001" FT /product="solute carrier family 25 (mitochondrial carrier; FT ornithine transporter) member 15" FT /note="match: ESTs: Em:BF599603.1" FT mRNA join(41367294..41367417,41373193..41373308, FT 41379254..41379391,41381430..>41381562) FT /gene="SLC25A15" FT /locus_tag="RP11-346L13.4-002" FT /product="solute carrier family 25 (mitochondrial carrier; FT ornithine transporter) member 15" FT /note="match: ESTs: Em:AI429712 Em:BF533259" FT CDS join(41367363..41367417,41373193..41373451, FT 41381430..>41381514) FT /gene="SLC25A15" FT /locus_tag="RP11-346L13.4-001" FT /standard_name="OTTHUMP00000018302" FT /product="solute carrier family 25 (mitochondrial carrier; FT ornithine transporter) member 15" FT /protein_id="CAH72773.1" FT /translation="MKSNPAIQAAIDLTAGAAGGTACVLTGQPFDTMKVKMQTFPDLYR FT GLTDCCLKTYSQVGFRGFYKGTSPALIANIAENSVLFMCYGFCQQVVRKVAGLDKQAKL FT STVWSVIKSILRKDGPLGFYHGLSSTLLR" FT CDS join(41367363..41367417,41373193..41373451, FT 41379254..41379391,41381430..41381599,41382574..41382732, FT 41383679..41383803) FT /gene="SLC25A15" FT /locus_tag="RP11-346L13.4-005" FT /standard_name="OTTHUMP00000178580" FT /product="solute carrier family 25 (mitochondrial carrier; FT ornithine transporter) member 15" FT /note="match: proteins: Sw:Q9WVD5.1 Sw:Q9Y619.1 Tr:Q2KHW4.1 FT Tr:Q543E2.1 Tr:Q5VZD8.1" FT /protein_id="CAH72774.1" FT /translation="MKSNPAIQAAIDLTAGAAGGTACVLTGQPFDTMKVKMQTFPDLYR FT GLTDCCLKTYSQVGFRGFYKGTSPALIANIAENSVLFMCYGFCQQVVRKVAGLDKQAKL FT SDLQNAAAGSFASAFAALVLCPTELVKCRLQTMYEMETSGKIAKSQNTVWSVIKSILRK FT DGPLGFYHGLSSTLLREVPGYFFFFGGYELSRSFFASGRSKDELGPVPLMLSGGVGGIC FT LWLAVYPVDCIKSRIQVLSMSGKQAGFIRTFINVVKNEGITALYSGLKPTMIRAFPANG FT ALFLAYEYSRKLMMNQLEAY" FT CDS complement(join(41396432..41396511,41398863..41398924, FT AL590064.9:2975..3047,AL590064.9:13027..13145, FT AL590064.9:31130..31223,AL590064.9:31326..31403, FT AL590064.9:32224..32284,AL590064.9:40661..40821)) FT /pseudo FT /locus_tag="RP11-346L13.3-001" FT /product="TPTE and PTEN homologous inositol lipid FT phosphatase (TPIP) pseudogene" FT /note="match: proteins: Sw:P56180 Sw:Q6XPS3 Sw:Q6XPS3 FT Tr:Q91X01 Tr:Q91X02 Tr:Q91X03" FT polyA_signal 41386577..41386582 FT polyA_site 41386596 FT misc_feature 41395668 FT /note="Clone_left_end: RP11-471M10" FT misc_feature 41399668..41471433 FT /note="annotated region of clone" FT polyA_site complement(41400485) FT polyA_signal complement(41400501..41400506) FT misc_feature 41419088..41419101 FT /note="Sequence from overlapping clone RP11-251C7 FT (AL161614). Assembly confirmed by restriction digest" FT misc_feature 41420420..41420454 FT /note="Inconsistency in the number of copies of the repeat FT element between subclones" FT mRNA complement(join(41400642..41400730,41410733..41410824, FT 41410945..41411021,41429891..41429951, FT AL157877.11:26322..26452)) FT /locus_tag="RP11-471M10.1-001" FT /product="novel transcript similar to TPTE and PTEN FT homologous inositol lipid phosphatase (TPIP)" FT /note="match: ESTs: Em:BI669062" FT mRNA complement(join(41400485..41400730,41410733..41410824, FT 41410945..41411021,41428797..41429127)) FT /locus_tag="RP11-471M10.1-002" FT /product="novel transcript similar to TPTE and PTEN FT homologous inositol lipid phosphatase (TPIP)" FT /note="match: ESTs: Em:AA493915.1" FT polyA_signal complement(41437137..41437142) FT CDS complement(41437735..41438038) FT /pseudo FT /locus_tag="RP11-471M10.2-001" FT /product="cytochrome C (HCS) pseudogene" FT /note="match: proteins: Sw:P00008 Sw:P00020 Sw:P00021 FT Sw:P12831 Sw:P62898 Sw:P67882 Sw:P68098 Sw:P68519 Tr:Q56A15 FT Tr:Q56A15 Tr:Q56A15 Tr:Q56A15" FT CDS complement(join(AL161614.16:67711..67790, FT AL161614.16:70142..70203,41400642..41400714, FT 41410694..41410812,41428797..41428890,41428993..41429070, FT 41429891..41429951,41438328..41438488)) FT /pseudo FT /locus_tag="RP11-346L13.3-001" FT /product="TPTE and PTEN homologous inositol lipid FT phosphatase (TPIP) pseudogene" FT /note="match: proteins: Sw:P56180 Sw:Q6XPS3 Sw:Q6XPS3 FT Tr:Q91X01 Tr:Q91X02 Tr:Q91X03" FT misc_feature 41444618 FT /note="Clone_right_end: RP11-251C7" FT misc_feature 41467434 FT /note="Clone_left_end: RP11-2P5" FT misc_feature 41471434..41668000 FT /note="annotated region of clone" FT mRNA complement(join(41482294..41482348,41483522..41483615, FT 41485870..41485941,41486650..41486719,41488151..>41488241)) FT /gene="SUGT1L1" FT /locus_tag="RP11-2P5.2-003" FT /product="SGT1, suppressor of G2 allele of SKP1 like 1 (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AF068289" FT mRNA complement(join(AL590064.9:2975..3063, FT AL590064.9:13066..13157,AL590064.9:13278..13354, FT AL590064.9:32224..32284,41495755..41495885)) FT /locus_tag="RP11-471M10.1-001" FT /product="novel transcript similar to TPTE and PTEN FT homologous inositol lipid phosphatase (TPIP)" FT /note="match: ESTs: Em:BI669062" FT mRNA complement(join(41482295..41482348,41485870..41485941, FT 41486650..41486719,41488151..41488241,41495610..41495667, FT 41495755..41495855)) FT /gene="SUGT1L1" FT /locus_tag="RP11-2P5.2-001" FT /product="SGT1, suppressor of G2 allele of SKP1 like 1 (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AF132856 Em:AJ344097 Em:AK010830 FT Em:AK020433 Em:BC000911 Em:BC009167" FT mRNA complement(join(41486016..41486859,41495610..41495667, FT 41495755..41495910)) FT /gene="SUGT1L1" FT /locus_tag="RP11-2P5.2-002" FT /product="SGT1, suppressor of G2 allele of SKP1 like 1 (S. FT cerevisiae)" FT /note="match: cDNAs: Em:AF086053 Em:BC020814" FT CDS complement(join(41486857..41486859,41495610..41495667, FT 41495755..41495792)) FT /gene="SUGT1L1" FT /locus_tag="RP11-2P5.2-002" FT /standard_name="OTTHUMP00000018307" FT /product="SGT1, suppressor of G2 allele of SKP1 like 1 (S. FT cerevisiae)" FT /protein_id="CAI13219.1" FT /translation="MAAAAAGPAASQRFFQSFSDALIDQDPQAALE" FT polyA_site complement(41506164) FT polyA_signal complement(41506181..41506186) FT misc_feature 41527692 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 200bp by restriction digest data" FT mRNA complement(join(41506168..41508164,41515057..41515506, FT 41517088..41517280,41517978..41518061,41523942..41524109, FT 41525465..41525572,41525720..41525837,41532972..41533152, FT 41556119..41556378)) FT /gene="ELF1" FT /locus_tag="RP11-2P5.1-001" FT /product="E74-like factor 1 (ets domain transcription FT factor)" FT /note="match: ESTs: Em:BF794150" FT /note="match: cDNAs: Em:BC010575" FT CDS complement(join(41507561..41508164,41515057..41515506, FT 41517088..41517280,41517978..41518061,41523942..41524109, FT 41525465..41525572,41532972..41533152,41556119..41556190)) FT /gene="ELF1" FT /locus_tag="RP11-2P5.1-003" FT /standard_name="OTTHUMP00000018310" FT /product="E74-like factor 1 (ets domain transcription FT factor)" FT /note="match: proteins: Sw:P32519.1 Tr:Q8N6F6.1" FT /protein_id="CAI13220.1" FT /translation="MAAVVQQNDLVFEFASNVMEDERQLGDPAIFPAVIVEHVPGADIL FT NSYAGLACVEEPNDMITESSLDVAEEEIIDDDDDDITLTVEASCHDGDETIETIEAAEA FT LLNMDSPGPMLDEKRINNNIFSSPEDDMVVAPVTHVSVTLDGIPEVMETQQVQEKYADS FT PGASSPEQPKRKKGRKTKPPRPDSPATTPNISVKKKNKDGKGNTIYLWEFLLALLQDKA FT TCPKYIKWTQREKGIFKLVDSKAVSRLWGKHKNKPDMNYETMGRALRYYYQRGILAKVE FT GQRLVYQFKEMPKDLIYINDEDPSSSIESSDPSLSSSATSNRNQTSRSRVSSSPGVKGG FT ATTVLKPGNSKAAKPKDPVEVAQPSEVLRTVQPTQSPYPTQLFRTVHVVQPVQAVPEGE FT AARTSTMQDETLNSSVQSIRTIQAPTQVPVVVSPRNQQLHTVTLQTVPLTTVIASTDPS FT AGTGSQKFILQAIPSSQPMTVLKENVMLQSQKAGSPPSIVLGPAQVQQVLTSNVQTICN FT GTVSVASSPSFSATAPVVTFSPRSSQLVAHPPGTVITSVIKTQETKTLTQEVEKKESED FT HLKENTEKTEQQPQPYVMVVSSSNGFTSQVAMKQNELLEPNSF" FT CDS complement(<41556119..41556190) FT /gene="ELF1" FT /locus_tag="RP11-2P5.1-002" FT /standard_name="OTTHUMP00000018309" FT /product="E74-like factor 1 (ets domain transcription FT factor)" FT /protein_id="CAI13221.1" FT /translation="MAAVVQQNDLVFEFASNVMEDERQ" FT CDS complement(join(41566915..41566981,41567005..41567467)) FT /pseudo FT /locus_tag="RP11-2P5.4-001" FT /product="regulator of G-protein signaling 17 (RGS17) FT pseudogene" FT /note="match: proteins: Sw:O76081 Sw:Q9PWA0 Sw:Q9QZB0 FT Sw:Q9UGC6" FT mRNA complement(join(41506170..41508164,41515057..41515506, FT 41517088..41517280,41517978..41518061,41523942..41524109, FT 41525465..41525572,41532972..41533152,41556119..41556418, FT 41593364..41593450)) FT /gene="ELF1" FT /locus_tag="RP11-2P5.1-003" FT /product="E74-like factor 1 (ets domain transcription FT factor)" FT /note="match: ESTs: Em:AL559590.3 Em:BG501760.1 FT Em:BQ229369.1 Em:BX482968.1 Em:DB241233.1" FT /note="match: cDNAs: Em:BC030507.2 Em:M82882.1" FT misc_feature 41625766 FT /note="Clone_left_end: RP11-264M3" FT mRNA complement(join(<41556119..41556418,41634974..41635576)) FT /gene="ELF1" FT /locus_tag="RP11-2P5.1-002" FT /product="E74-like factor 1 (ets domain transcription FT factor)" FT /note="match: ESTs: Em:AA313968 Em:AL598396 Em:AL691606 FT Em:BM728661" FT mRNA join(41635410..41635811,41636780..41636852, FT 41639152..41639214,41639300..41639423,41642697..41642873, FT 41645663..41645709,41646918..41646993,41650180..41650373, FT 41654782..41654945,41656840..41658137) FT /gene="WBP4" FT /locus_tag="RP11-2P5.5-001" FT /product="WW domain binding protein 4 (formin binding FT protein 21)" FT /note="match: ESTs: Em:AL554528.3 Em:BM462928.1 FT Em:CB241394.1" FT /note="match: cDNAs: Em:AF071185.1 Em:AK000979.1 FT Em:AK001557.1 Em:BC104879.1 Em:BC108310.1 Em:CR624814.1" FT CDS join(41635810..41635811,41636780..41636852, FT 41639152..41639214,41639300..41639423,41642697..41642873, FT 41645663..41645709,41646918..41646993,41650180..41650373, FT 41654782..41654945,41656840..41657050) FT /gene="WBP4" FT /locus_tag="RP11-2P5.5-001" FT /standard_name="OTTHUMP00000018311" FT /product="WW domain binding protein 4 (formin binding FT protein 21)" FT /note="match: proteins: Sw:O75554.1 Tr:Q32P29.1" FT /protein_id="CAI13223.1" FT /translation="MADYWKSQPKKFCDYCKCWIADNRPSVEFHERGKNHKENVAKRIS FT EIKQKSLDKAKEEEKASKEFAAMEAAALKAYQEDLKRLGLESEILEPSITPVTSTIPPT FT STSNQQKEKKEKKKRKKDPSKGRWVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKT FT AVKTVWVEGLSEDGFTYYYNTETGESRWEKPDDFIPHTSDLPSSKVNENSLGTLDESKS FT SDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKEKSIQKQNSLGSN FT EEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADGGGEPKVVFKEK FT TVTSLGVMADGVAPVFKKRRTENGKSRNLRQRGDDQ" FT polyA_signal 41658119..41658124 FT polyA_site 41658142 FT misc_feature 41666000 FT /note="Clone_right_end: RP11-2P5" FT misc_feature 41693240 FT /note="Clone_left_end: RP11-74J13" FT misc_feature 41693440..41895904 FT /note="annotated region of clone" FT polyA_site complement(41701705) FT mRNA complement(41701705..41706882) FT /gene="KBTBD6" FT /locus_tag="RP11-74J13.5-001" FT /product="kelch repeat and BTB (POZ) domain containing 6" FT /note="match: ESTs: Em:BP282842.1 Em:BX108050.1" FT /note="match: cDNAs: Em:AK056633.1 Em:BC000560.2 FT Em:CR749688.1" FT polyA_signal complement(41701718..41701723) FT CDS complement(41704623..41706647) FT /gene="KBTBD6" FT /locus_tag="RP11-74J13.5-001" FT /standard_name="OTTHUMP00000018312" FT /product="kelch repeat and BTB (POZ) domain containing 6" FT /note="match: proteins: Sw:Q86V97.1 Tr:Q5T6Y8.1" FT /protein_id="CAI16611.1" FT /translation="MQSREDAPRSRRLASPRGGKRPKKIHKPTVSAFFTGPEELKDTAH FT SAALLAQLKSFYDARLLCDVTIEVVTPGSGPGTGRLFPCNRNVLAAACPYFKSMFTGGM FT YESQQASVTMHDVDAESFEVLVDYCYTGRVSLSEANVERLYAASDMLQLEYVREACASF FT LARRLDLTNCTAILKFADAFGHRKLRSQAQSYIAQNFKQLSHMGSIREETLADLTLAQL FT LAVLRLDSLDVESEQTVCHVAVQWLEAAPKERGPSAAEVFKCVRWMHFTEEDQDYLEGL FT LTKPIVKKYCLDVIEGALQMRYGDLLYKSLVPVPNSSSSSSSSNSLVSAAENPPQRLGM FT CAKEMVIFFGHPRDPFLCCDPYSGDLYKVPSPLTCLAHTRTVTTLAVCISPDHDIYLAA FT QPRTDLWVYKPAQNSWQQLADRLLCREGMDVAYLNGYIYILGGRDPITGVKLKEVECYN FT VKRNQWALVAPLPHSFLSFDLMVIRDYLYALNSKRMFCYDPSHNMWLKCVSLKRNDFQE FT ACVFNEEIYCICDIPVMKVYNPVRAEWRQMNNIPLVSETNNYRIIKHGQKLLLITSRTP FT QWKKNRVTVYEYDIRGDQWINIGTTLGLLQFDSNFFCLSARVYPSCLEPGQSFLTEEEE FT IPSESSTEWDLGGFSEPDSESGSSSSLSDDDFWVRVAPQ" FT CDS complement(41744838..41745284) FT /pseudo FT /locus_tag="RP11-74J13.2-001" FT /product="calmodulin pseudogene" FT /note="match: proteins: Sw:O94739 Sw:P04353 Sw:P11120 FT Sw:P17928 Sw:P27164 Sw:P62158 Sw:Q95NI4 Tr:Q8W0Q0 Tr:Q9LDQ9 FT Tr:Q9M6U0" FT mRNA complement(41763969..41768702) FT /gene="KBTBD7" FT /locus_tag="RP11-74J13.1-001" FT /product="kelch repeat and BTB (POZ) domain containing 7" FT /note="match: ESTs: Em:AW956328.1 Em:BQ880264.1 FT Em:BU070208.1 Em:DA503137.1 Em:DA824440.1 Em:DN993046.1" FT /note="match: cDNAs: Em:AK091344.1 Em:AX746923.1 FT Em:BC022033.2" FT polyA_site complement(41763970) FT polyA_signal complement(41763987..41763992) FT polyA_site complement(41764715) FT polyA_signal complement(41764739..41764744) FT CDS complement(41766339..41768393) FT /gene="KBTBD7" FT /locus_tag="RP11-74J13.1-001" FT /standard_name="OTTHUMP00000018313" FT /product="kelch repeat and BTB (POZ) domain containing 7" FT /note="match: proteins: Sw:Q8WVZ9.1 Tr:Q5T6Y7.1 FT Tr:Q6FI68.1" FT /protein_id="CAI16613.1" FT /translation="MQSREDVPRSRRLASPRGGRRPKRISKPSVSAFFTGPEELKDTAH FT SAALLAQLKSFYDARLLCDVTIEVVTPGSGPGTGRLFSCNRNVLAAACPYFKSMFTGGM FT YESQQASVTMHDVDAESFEVLVDYCYTGRVSLSEANVQRLYAASDMLQLEYVREACASF FT LARRLDLTNCTAILKFADAFDHHKLRSQAQSYIAHNFKQLSRMGSIREETLADLTLAQL FT LAVLRLDSLDIESERTVCHVAVQWLEAAAKERGPSAAEVFKCVRWMHFTEEDQDYLEGL FT LTKPIVKKYCLDVIEGALQMRYGDLLYKSLVPVPNSSSSSSSSNSLVSAAENPPQRLGM FT CAKEMVIFFGHPRDPFLCYDPYSGDIYTMPSPLTSFAHTKTVTSSAVCVSPDHDIYLAA FT QPRKDLWVYKPAQNSWQQLADRLLCREGMDVAYLNGYIYILGGRDPITGVKLKEVECYS FT VQRNQWALVAPVPHSFYSFELIVVQNYLYAVNSKRMLCYDPSHNMWLNCASLKRSDFQE FT ACVFNDEIYCICDIPVMKVYNPARGEWRRISNIPLDSETHNYQIVNHDQKLLLITSTTP FT QWKKNRVTVYEYDTREDQWINIGTMLGLLQFDSGFICLCARVYPSCLEPGQSFITEEDD FT ARSESSTEWDLDGFSELDSESGSSSSFSDDEVWVQVAPQRNAQDQQGSL" FT CDS complement(41773968..41774943) FT /pseudo FT /locus_tag="RP11-74J13.6-001" FT /product="MORF-related gene 15 (MRG15) pseudogene" FT /note="match: proteins: Sw:P60762 Sw:Q9UBU8 Tr:P60762 FT Tr:Q569V4" FT misc_feature 41787010 FT /note="Clone_right_end: RP11-264M3" FT polyA_site complement(41790505) FT polyA_signal complement(41790529..41790534) FT mRNA complement(join(41791111..41791364,41794673..41794779, FT 41797392..41797490,41800568..41800705)) FT /gene="MTRF1" FT /locus_tag="RP11-74J13.3-004" FT /product="mitochondrial translational release factor 1" FT /note="match: ESTs: Em:AA694032 Em:AI051946 Em:AI248927" FT CDS complement(join(41791251..41791364,41797392..41797490, FT 41800568..41800704,41808026..41808143,41814397..41814569, FT 41826781..41826888,41827085..41827166,41828665..41828756, FT 41834629..41835043)) FT /gene="MTRF1" FT /locus_tag="RP11-74J13.3-006" FT /standard_name="OTTHUMP00000018315" FT /product="mitochondrial translational release factor 1" FT /note="match: proteins: Sw:O75570.2" FT /protein_id="CAI16615.1" FT /translation="MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQN FT RNCILHLLSKNWSRRYCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRR FT SLNRRHAELAPLAAIYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKI FT NMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQF FT ELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMS FT VIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERS FT QIKNKEIAFRVLRARLYQQIIEKDKRQQQSARKLQVGTRAQSERIRTYNFTQDRVSDHR FT IAYEVRDIKEFLCGGKGLDQLIQRLLQSADEEAIAELLDEHLKSAK" FT mRNA complement(join(41826420..41826888,41827085..41827166, FT 41828665..41828756,41834629..41834722)) FT /gene="MTRF1" FT /locus_tag="RP11-74J13.3-003" FT /product="mitochondrial translational release factor 1" FT /note="match: ESTs: Em:AA805424 Em:AW070226" FT CDS complement(join(<41826800..41826888,41827085..41827166, FT 41828665..41828756,41834629..41835043)) FT /gene="MTRF1" FT /locus_tag="RP11-74J13.3-009" FT /standard_name="OTTHUMP00000018317" FT /product="mitochondrial translational release factor 1" FT /protein_id="CAI16617.1" FT /translation="MNRHLCVWLFRHPSLNGYLQCHIQLHSHQFRQIHLDTRLQVFRQN FT RNCILHLLSKNWSRRYCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRR FT SLNRRHAELAPLAAIYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKI FT NMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQF FT ELLN" FT mRNA complement(join(<41835569..41835961,41836351..41836467, FT 41837409..41837626)) FT /gene="MTRF1" FT /locus_tag="RP11-74J13.3-002" FT /product="mitochondrial translational release factor 1" FT /note="match: ESTs: Em:BF244562" FT mRNA complement(join(41791111..41791364,41797392..41797490, FT 41800568..41800704,41808026..41808143,41814397..41814569, FT 41826781..41826888,41827085..41827166,41828665..41828756, FT 41834629..41835051,41835827..41835961,41836351..41836467, FT 41837411..41837620)) FT /gene="MTRF1" FT /locus_tag="RP11-74J13.3-007" FT /product="mitochondrial translational release factor 1" FT /note="match: cDNAs: Em:AK055086" FT mRNA complement(join(41790825..41791364,41797392..41797490, FT 41800568..41800704,41808026..41808143,41814397..41814569, FT 41826781..41826888,41827085..41827166,41828665..41828756, FT 41834629..41835051,41837621..41837713)) FT /gene="MTRF1" FT /locus_tag="RP11-74J13.3-006" FT /product="mitochondrial translational release factor 1" FT /note="match: ESTs: Em:AW612002.1 Em:BI752303.1 FT Em:BX099180.1 Em:BX480457.1" FT /note="match: cDNAs: Em:AB169143.1 Em:BC042196.1" FT mRNA complement(join(41814397..41814569,41826418..41826888, FT 41827085..41827166,41828665..41828756,41833713..41833836, FT 41834629..41835051,41836184..41836467,41837621..41837705)) FT /gene="MTRF1" FT /locus_tag="RP11-74J13.3-008" FT /product="mitochondrial translational release factor 1" FT /note="match: cDNAs: Em:BC027731" FT mRNA complement(join(41826841..41826888,41827085..41827166, FT 41828665..41828756,41833713..41833836,41834629..41835051, FT 41837621..41837713)) FT /gene="MTRF1" FT /locus_tag="RP11-74J13.3-005" FT /product="mitochondrial translational release factor 1" FT /note="match: ESTs: Em:BI769930" FT mRNA complement(join(<41826800..41826888,41827085..41827166, FT 41828665..41828756,41834629..41835051,41836547..41836617, FT 41837621..41837683)) FT /gene="MTRF1" FT /locus_tag="RP11-74J13.3-009" FT /product="mitochondrial translational release factor 1" FT /note="match: ESTs: Em:BI335552" FT mRNA complement(join(<41835469..41835961,41836547..41836617, FT 41837621..41837674)) FT /gene="MTRF1" FT /locus_tag="RP11-74J13.3-001" FT /product="mitochondrial translational release factor 1" FT /note="match: ESTs: Em:BM312083" FT CDS complement(41861939..41862456) FT /pseudo FT /locus_tag="RP11-74J13.7-001" FT /product="ras homolog gene family, member G (rho G) (ARHG) FT pseudogene" FT /note="match: proteins: Sw:P34149 Sw:P84096 Sw:Q24816 FT Sw:Q94124" FT mRNA join(41885341..41885718,41890982..41891066, FT 41892942..41893046,41894803..41894960, FT AL590665.9:3288..3422,AL590665.9:5930..6083, FT AL590665.9:8956..9075,AL590665.9:11506..11601, FT AL590665.9:16882..16988,AL590665.9:35376..35448, FT AL590665.9:38536..38705,AL590665.9:39042..39194, FT AL590665.9:42263..42391,AL590665.9:47671..47884, FT AL590665.9:49322..49515,AL590665.9:52435..52543, FT AL731858.10:2206..2304,AL731858.10:3111..3254, FT AL731858.10:4216..4313,AL731858.10:4879..6504) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-003" FT /product="NMDA receptor regulated 1-like" FT /note="match: ESTs: Em:CJ485679.1 Em:CR981013.1 FT Em:CV030426.1 Em:DA223824.1 Em:DA685365.1 Em:DB078940.1 FT Em:DB088970.1 Em:DB100300.1" FT /note="match: cDNAs: Em:AK025707.1 Em:BC028112.1" FT mRNA join(41885416..41885718,41890982..41891066, FT 41892942..41893046,41894803..41894960, FT AL590665.9:3288..3422,AL590665.9:5930..6083, FT AL590665.9:8956..9075,AL590665.9:11506..11601, FT AL590665.9:16882..16988,AL590665.9:35376..35448, FT AL590665.9:38536..38950) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-006" FT /product="NMDA receptor regulated 1-like" FT /note="match: cDNAs: Em:BC064592.1" FT /note="match: ESTs: Em:AI768620.1" FT mRNA join(41885418..41885718,41890982..41891066, FT 41892942..41893046,41894803..41894960, FT AL590665.9:3288..3422,AL590665.9:5930..6083, FT AL590665.9:8956..9075,AL590665.9:11506..11601, FT AL590665.9:35376..35448,AL590665.9:38536..38950) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-002" FT /product="NMDA receptor regulated 1-like" FT /note="match: ESTs: Em:AW236957.1 Em:BE501152.1" FT /note="match: cDNAs: Em:BC032318.1" FT mRNA join(41885431..41885718,41890982..41891066, FT 41892942..41893046,41894803..41894960, FT AL590665.9:3288..3422,AL590665.9:5930..6083, FT AL590665.9:8956..9075,AL590665.9:11506..11601, FT AL590665.9:16882..16988,AL590665.9:35376..35448, FT AL590665.9:38536..38705,AL590665.9:39042..39194, FT AL590665.9:42263..43105,AL590665.9:47671..47884, FT AL590665.9:49322..49436) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-001" FT /product="NMDA receptor regulated 1-like" FT /note="match: cDNAs: Em:AB070089.1 Em:AK097224.1" FT CDS join(41885665..41885718,41890982..41891066, FT 41892942..41893046,41894803..41894960, FT AL590665.9:3288..3422,AL590665.9:5930..6083, FT AL590665.9:8956..9075,AL590665.9:11506..11601, FT AL590665.9:16882..16988,AL590665.9:35376..35448, FT AL590665.9:38536..38705,AL590665.9:39042..39194, FT AL590665.9:42263..42391,AL590665.9:47671..47884, FT AL590665.9:49322..49515,AL590665.9:52435..52543, FT AL731858.10:2206..2304,AL731858.10:3111..3254, FT AL731858.10:4216..4313,AL731858.10:4879..5076) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-003" FT /standard_name="OTTHUMP00000018320" FT /product="NMDA receptor regulated 1-like" FT /note="match: proteins: Sw:Q6N069.2 Sw:Q9DBB4.1" FT /protein_id="CAI16619.1" FT /translation="MPNVLLPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAEH FT GETLAMKGLTLNCLGKKEEAYEFVRKGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKCYR FT NALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIAYHLLKD FT YDMALKLLEEFRQTQQVPPNKIDYEYSELILYQNQVMREADLLQESLEHIEMYEKQICD FT KLLVEEIKGEILLKLGRLKEASEVFKNLIDRNAENWCYYEGLEKALQISTLEERLQIYE FT EISKQHPKAITPRRLPLTLVPGERFRELMDKFLRVNFSKGCPPLFTTLKSLYYNTEKVS FT IIQELVTNYEASLKTCDFFSPYENGEKEPPTTLLWVQYFLAQHFDKLGQYSLALDYINA FT AIASTPTLIELFYMKAKIYKHIGNLKEAAKWMDEAQSLDTADRFINSKCAKYMLRANMI FT KEAEEMCSKFTREGTSAMENLNEMQCMWFQTECISAYQRLGRYGDALKKCHEVERHFFE FT ITDDQFDFHTYCMRKMTLRAYVDLLRLEDILRRHAFYFKAARSAIEIYLKLYDNPLTNE FT SKQQEINSENLSAKELKKMLSKQRRAQKKAKLEEERKHAERERQQKNQKKKRDEEEEEA FT SGLKEELIPEKLERVENPLEEAVKFLIPLKNLVADNIDTHLLAFEIYFRKGKFLLMLQS FT VKRAFAINSNNPWLHECLIRFSKSVSNHSNLPDIVSKVLSQEMQKIFVKKDLESFNEDF FT LKRNATSLQHLLSGAKMMYFLDKSRQEKAIAIATRLDETIKDKDVKTLIKVSEALLDGS FT FGNCSSQYEEYRMACHNLLPFTSAFLPAVNEVDNPNVALNHTANYDVLANEI" FT CDS join(41885665..41885718,41890982..41891066, FT 41892942..41893046,41894803..41894960, FT AL590665.9:3288..3422,AL590665.9:5930..6083, FT AL590665.9:8956..9075,AL590665.9:11506..11601, FT AL590665.9:16882..16988,AL590665.9:35376..35448, FT AL590665.9:38536..38738) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-006" FT /standard_name="OTTHUMP00000198977" FT /product="NMDA receptor regulated 1-like" FT /note="match: proteins: Sw:Q6N069-4.2" FT /protein_id="CAQ06902.1" FT /translation="MPNVLLPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAEH FT GETLAMKGLTLNCLGKKEEAYEFVRKGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKCYR FT NALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIAYHLLKD FT YDMALKLLEEFRQTQQVPPNKIDYEYSELILYQNQVMREADLLQESLEHIEMYEKQICD FT KLLVEEIKGEILLKLGRLKEASEVFKNLIDRNAENWCYYEGLEKALQISTLEERLQIYE FT EISKQHPKAITPRRLPLTLVPGERFRELMDKFLRVNFSKGCPPLFTTLKSLYYNTEKVS FT IIQELVTNYEASLKTCDFFSPYENGEKEPPTTLLWVQYFLAQHFDKLGQYSLALDYINA FT AIASTPTLIELFYMKAKIYKVKSESCFLSS" FT misc_feature 41895804 FT /note="Clone_right_end: RP11-74J13" FT misc_feature 41895905..41946662 FT /note="annotated region of clone" FT mRNA join(41901993..41902186,41902860..41902979, FT 41905410..41905505,41910786..41910823) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-011" FT /product="NMDA receptor regulated 1-like" FT /note="match: ESTs: Em:DB459926.1" FT mRNA join(41932443..41932609,41932946..41933098, FT 41936167..41936295,41941575..41941788,41943226..41943340) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-004" FT /product="NMDA receptor regulated 1-like" FT /note="match: cDNAs: Em:BC017099.1" FT polyA_signal 41932828..41932833 FT polyA_site 41932854 FT mRNA join(41936262..41936295,41936867..41937009, FT 41941575..41941788,41943226..41943419,41946339..41946447, FT AL731858.10:2206..2304,AL731858.10:3111..3154) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-007" FT /product="NMDA receptor regulated 1-like" FT /note="match: ESTs: Em:BB700720.1 Em:BB700743.1 FT Em:BB701344.1 Em:BQ964445.1" FT mRNA join(41936591..41937009,41941575..41941788, FT 41943226..41943419,41946339..41946447, FT AL731858.10:2206..2304,AL731858.10:3111..3254, FT AL731858.10:4216..4313,AL731858.10:4879..6504) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-005" FT /product="NMDA receptor regulated 1-like" FT /note="match: cDNAs: Em:AB049844.1 Em:AK025707.1" FT polyA_site 41943340 FT mRNA join(41943375..41943419,41946339..41946447, FT AL731858.10:2206..2304,AL731858.10:3135..3255) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-008" FT /product="NMDA receptor regulated 1-like" FT /note="match: ESTs: Em:AA076277.1" FT misc_feature 41944662 FT /note="Point of insertion/deletion between clone FT RP11-229H11 (AL590665) and RP11-157L14 (AL354833)" FT mRNA join(AL354696.11:192002..192379,AL354696.11:197643..197727, FT AL354696.11:199603..199707,AL354696.11:201464..201621, FT 41897192..41897326,41899834..41899987,41902860..41902979, FT 41905410..41905505,41910786..41910892,41929280..41929352, FT 41932440..41932609,41932946..41933098,41936167..41936295, FT 41941575..41941788,41943226..41943419,41946339..41946447, FT AL731858.10:2206..2304,AL731858.10:3111..3254, FT AL731858.10:4216..4313,AL731858.10:4879..6504) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-003" FT /product="NMDA receptor regulated 1-like" FT /note="match: cDNAs: Em:AK025707.1 Em:BC028112.1" FT /note="match: ESTs: Em:CJ485679.1 Em:CR981013.1 FT Em:CV030426.1 Em:DA223824.1 Em:DA685365.1 Em:DB078940.1 FT Em:DB088970.1 Em:DB100300.1" FT mRNA join(AL354696.11:192077..192379,AL354696.11:197643..197727, FT AL354696.11:199603..199707,AL354696.11:201464..201621, FT 41897192..41897326,41899834..41899987,41902860..41902979, FT 41905410..41905505,41910786..41910892,41929280..41929352, FT 41932440..41932854) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-006" FT /product="NMDA receptor regulated 1-like" FT /note="match: cDNAs: Em:BC064592.1" FT /note="match: ESTs: Em:AI768620.1" FT mRNA join(AL354696.11:192079..192379,AL354696.11:197643..197727, FT AL354696.11:199603..199707,AL354696.11:201464..201621, FT 41897192..41897326,41899834..41899987,41902860..41902979, FT 41905410..41905505,41929280..41929352,41932440..41932854) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-002" FT /product="NMDA receptor regulated 1-like" FT /note="match: cDNAs: Em:BC032318.1" FT /note="match: ESTs: Em:AW236957.1 Em:BE501152.1" FT mRNA join(AL354696.11:192092..192379,AL354696.11:197643..197727, FT AL354696.11:199603..199707,AL354696.11:201464..201621, FT 41897192..41897326,41899834..41899987,41902860..41902979, FT 41905410..41905505,41910786..41910892,41929280..41929352, FT 41932440..41932609,41932946..41933098,41936167..41937009, FT 41941575..41941788,41943226..41943340) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-001" FT /product="NMDA receptor regulated 1-like" FT /note="match: cDNAs: Em:AB070089.1 Em:AK097224.1" FT CDS join(AL354696.11:192326..192379,AL354696.11:197643..197727, FT AL354696.11:199603..199707,AL354696.11:201464..201621, FT 41897192..41897326,41899834..41899987,41902860..41902979, FT 41905410..41905505,41910786..41910892,41929280..41929352, FT 41932440..41932609,41932946..41933098,41936167..41936295, FT 41941575..41941788,41943226..41943419,41946339..41946447, FT AL731858.10:2206..2304,AL731858.10:3111..3254, FT AL731858.10:4216..4313,AL731858.10:4879..5076) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-003" FT /standard_name="OTTHUMP00000018320" FT /product="NMDA receptor regulated 1-like" FT /note="match: proteins: Sw:Q6N069.2 Sw:Q9DBB4.1" FT /protein_id="CAH71511.1" FT /translation="MPNVLLPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAEH FT GETLAMKGLTLNCLGKKEEAYEFVRKGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKCYR FT NALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIAYHLLKD FT YDMALKLLEEFRQTQQVPPNKIDYEYSELILYQNQVMREADLLQESLEHIEMYEKQICD FT KLLVEEIKGEILLKLGRLKEASEVFKNLIDRNAENWCYYEGLEKALQISTLEERLQIYE FT EISKQHPKAITPRRLPLTLVPGERFRELMDKFLRVNFSKGCPPLFTTLKSLYYNTEKVS FT IIQELVTNYEASLKTCDFFSPYENGEKEPPTTLLWVQYFLAQHFDKLGQYSLALDYINA FT AIASTPTLIELFYMKAKIYKHIGNLKEAAKWMDEAQSLDTADRFINSKCAKYMLRANMI FT KEAEEMCSKFTREGTSAMENLNEMQCMWFQTECISAYQRLGRYGDALKKCHEVERHFFE FT ITDDQFDFHTYCMRKMTLRAYVDLLRLEDILRRHAFYFKAARSAIEIYLKLYDNPLTNE FT SKQQEINSENLSAKELKKMLSKQRRAQKKAKLEEERKHAERERQQKNQKKKRDEEEEEA FT SGLKEELIPEKLERVENPLEEAVKFLIPLKNLVADNIDTHLLAFEIYFRKGKFLLMLQS FT VKRAFAINSNNPWLHECLIRFSKSVSNHSNLPDIVSKVLSQEMQKIFVKKDLESFNEDF FT LKRNATSLQHLLSGAKMMYFLDKSRQEKAIAIATRLDETIKDKDVKTLIKVSEALLDGS FT FGNCSSQYEEYRMACHNLLPFTSAFLPAVNEVDNPNVALNHTANYDVLANEI" FT CDS join(AL354696.11:192326..192379,AL354696.11:197643..197727, FT AL354696.11:199603..199707,AL354696.11:201464..201621, FT 41897192..41897326,41899834..41899987,41902860..41902979, FT 41905410..41905505,41910786..41910892,41929280..41929352, FT 41932440..41932642) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-006" FT /standard_name="OTTHUMP00000198977" FT /product="NMDA receptor regulated 1-like" FT /note="match: proteins: Sw:Q6N069-4.2" FT /protein_id="CAQ09847.1" FT /translation="MPNVLLPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAEH FT GETLAMKGLTLNCLGKKEEAYEFVRKGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKCYR FT NALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIAYHLLKD FT YDMALKLLEEFRQTQQVPPNKIDYEYSELILYQNQVMREADLLQESLEHIEMYEKQICD FT KLLVEEIKGEILLKLGRLKEASEVFKNLIDRNAENWCYYEGLEKALQISTLEERLQIYE FT EISKQHPKAITPRRLPLTLVPGERFRELMDKFLRVNFSKGCPPLFTTLKSLYYNTEKVS FT IIQELVTNYEASLKTCDFFSPYENGEKEPPTTLLWVQYFLAQHFDKLGQYSLALDYINA FT AIASTPTLIELFYMKAKIYKVKSESCFLSS" FT misc_feature 41946663..42016905 FT /note="annotated region of clone" FT mRNA join(41946951..41946966,41947904..41948016, FT 41948878..41948975,41949541..41950318) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-009" FT /product="NMDA receptor regulated 1-like" FT /note="match: ESTs: Em:BM454423.1" FT mRNA join(41948611..41948975,41949541..41949948) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-010" FT /product="NMDA receptor regulated 1-like" FT /note="match: ESTs: Em:AW578523.1 Em:AW604450.1 FT Em:AW604454.1 Em:AW854373.1 Em:W79572.1" FT polyA_signal 41951144..41951149 FT polyA_site 41951163 FT polyA_site 41951166 FT CDS complement(41958909..41959319) FT /pseudo FT /locus_tag="RP11-396A22.4-001" FT /product="Tubulin beta-chain pseudogene" FT /note="match: proteins: Sw:P05304 Sw:P07436 Sw:P07437 FT Sw:P21148 Sw:P30157 Sw:P33188 Sw:P34108 Sw:P41352 Sw:P50262 FT Tr:Q60454 Tr:Q6LC01 Tr:Q76LX4 Tr:Q8UUK8 Tr:Q9JJY6 FT Tr:Q9SWW4" FT misc_feature 41972467 FT /note="Tandem repeat. Forced join. Assembly confirmed by FT restriction digest data" FT mRNA join(AL590665.9:42358..42391,AL590665.9:42963..43105, FT AL590665.9:47671..47884,AL590665.9:49322..49515, FT AL590665.9:52435..52543,41946868..41946966, FT 41947773..41947816) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-007" FT /product="NMDA receptor regulated 1-like" FT /note="match: ESTs: Em:BB700720.1 Em:BB700743.1 FT Em:BB701344.1 Em:BQ964445.1" FT mRNA join(AL590665.9:42687..43105,AL590665.9:47671..47884, FT AL590665.9:49322..49515,AL590665.9:52435..52543, FT 41946868..41946966,41947773..41947916,41948878..41948975, FT 41949541..41951166) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-005" FT /product="NMDA receptor regulated 1-like" FT /note="match: cDNAs: Em:AB049844.1 Em:AK025707.1" FT mRNA join(AL590665.9:49471..49515,AL590665.9:52435..52543, FT 41946868..41946966,41947797..41947917) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-008" FT /product="NMDA receptor regulated 1-like" FT /note="match: ESTs: Em:AA076277.1" FT misc_feature 42000263..42000563 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT CDS complement(42005425..42006446) FT /pseudo FT /locus_tag="RP11-396A22.3-001" FT /product="olfactory receptor, family 7, subfamily E, member FT 36 pseudogene" FT /note="match: proteins: Sw:O76100 Tr:O43789 Tr:O60411 FT Tr:Q8NEI9 Tr:Q8NGD7 Tr:Q8NH45 Tr:Q8NH46 Tr:Q8NH97 Tr:Q8NH98 FT Tr:Q8NH99 Tr:Q8NHA0 Tr:Q8NHA1 Tr:Q8NHB5 Tr:Q8NHC0 Tr:Q8NHC1 FT Tr:Q8VFI6 Tr:Q8VFI7 Tr:Q8VFI8 Tr:Q8VFI9 Tr:Q8VFJ0 Tr:Q8VFJ2 FT Tr:Q8WZ85 Tr:Q9UPJ0 Tr:Q9UPJ1" FT misc_feature 42012906 FT /note="Clone_left_end: RP11-157L14" FT CDS complement(42013952..42015035) FT /pseudo FT /locus_tag="RP11-396A22.2-001" FT /product="seven transmembrane helix receptor pseudogene" FT /note="match: proteins: Sw:O76100 Tr:O43789 Tr:O60411 FT Tr:Q8NEI9 Tr:Q8NGD7 Tr:Q8NH45 Tr:Q8NH46 Tr:Q8NH97 Tr:Q8NH98 FT Tr:Q8NH99 Tr:Q8NHA0 Tr:Q8NHA1 Tr:Q8NHB5 Tr:Q8NHC0 Tr:Q8NHC1 FT Tr:Q8VFJ0 Tr:Q8VFJ2 Tr:Q8VGU7 Tr:Q96CD9 Tr:Q9UPJ0 FT Tr:Q9UPJ1" FT mRNA join(AL354696.11:192002..192379,AL354696.11:197643..197727, FT AL354696.11:199603..199707,AL354696.11:201464..201621, FT AL590665.9:3288..3422,AL590665.9:5930..6083, FT AL590665.9:8956..9075,AL590665.9:11506..11601, FT AL590665.9:16882..16988,AL590665.9:35376..35448, FT AL590665.9:38536..38705,AL590665.9:39042..39194, FT AL590665.9:42263..42391,AL590665.9:47671..47884, FT AL590665.9:49322..49515,AL590665.9:52435..52543, FT 41946868..41946966,41947773..41947916,41948878..41948975, FT 41949541..41951166) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-003" FT /product="NMDA receptor regulated 1-like" FT /note="match: cDNAs: Em:AK025707.1 Em:BC028112.1" FT /note="match: ESTs: Em:CJ485679.1 Em:CR981013.1 FT Em:CV030426.1 Em:DA223824.1 Em:DA685365.1 Em:DB078940.1 FT Em:DB088970.1 Em:DB100300.1" FT CDS join(AL354696.11:192326..192379,AL354696.11:197643..197727, FT AL354696.11:199603..199707,AL354696.11:201464..201621, FT AL590665.9:3288..3422,AL590665.9:5930..6083, FT AL590665.9:8956..9075,AL590665.9:11506..11601, FT AL590665.9:16882..16988,AL590665.9:35376..35448, FT AL590665.9:38536..38705,AL590665.9:39042..39194, FT AL590665.9:42263..42391,AL590665.9:47671..47884, FT AL590665.9:49322..49515,AL590665.9:52435..52543, FT 41946868..41946966,41947773..41947916,41948878..41948975, FT 41949541..41949738) FT /gene="NARG1L" FT /locus_tag="RP11-396A22.1-003" FT /standard_name="OTTHUMP00000018320" FT /product="NMDA receptor regulated 1-like" FT /note="match: proteins: Sw:Q6N069.2 Sw:Q9DBB4.1" FT /protein_id="CAH73370.1" FT /translation="MPNVLLPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAEH FT GETLAMKGLTLNCLGKKEEAYEFVRKGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKCYR FT NALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIAYHLLKD FT YDMALKLLEEFRQTQQVPPNKIDYEYSELILYQNQVMREADLLQESLEHIEMYEKQICD FT KLLVEEIKGEILLKLGRLKEASEVFKNLIDRNAENWCYYEGLEKALQISTLEERLQIYE FT EISKQHPKAITPRRLPLTLVPGERFRELMDKFLRVNFSKGCPPLFTTLKSLYYNTEKVS FT IIQELVTNYEASLKTCDFFSPYENGEKEPPTTLLWVQYFLAQHFDKLGQYSLALDYINA FT AIASTPTLIELFYMKAKIYKHIGNLKEAAKWMDEAQSLDTADRFINSKCAKYMLRANMI FT KEAEEMCSKFTREGTSAMENLNEMQCMWFQTECISAYQRLGRYGDALKKCHEVERHFFE FT ITDDQFDFHTYCMRKMTLRAYVDLLRLEDILRRHAFYFKAARSAIEIYLKLYDNPLTNE FT SKQQEINSENLSAKELKKMLSKQRRAQKKAKLEEERKHAERERQQKNQKKKRDEEEEEA FT SGLKEELIPEKLERVENPLEEAVKFLIPLKNLVADNIDTHLLAFEIYFRKGKFLLMLQS FT VKRAFAINSNNPWLHECLIRFSKSVSNHSNLPDIVSKVLSQEMQKIFVKKDLESFNEDF FT LKRNATSLQHLLSGAKMMYFLDKSRQEKAIAIATRLDETIKDKDVKTLIKVSEALLDGS FT FGNCSSQYEEYRMACHNLLPFTSAFLPAVNEVDNPNVALNHTANYDVLANEI" FT misc_feature 42016906..42173776 FT /note="annotated region of clone" FT CDS 42016906..>42017786 FT /pseudo FT /locus_tag="RP11-157L14.1-001" FT /product="olfactory receptor pseudogene" FT /note="match: proteins: Sw:O43749 Sw:O60403 Sw:O60404 FT Sw:O60412 Sw:O60431 Sw:O76001 Sw:O76100 Sw:P23265 Sw:P23266 FT Sw:P23268 Sw:P23269 Sw:P23271 Sw:P23273 Sw:P30954 Sw:P30955 FT Sw:P34987 Sw:P35894 Sw:P35895 Sw:P35896 Sw:P37067 Sw:P37068 FT Sw:P37069 Sw:P37072 Sw:P70526 Sw:Q95157 Sw:Q9TU86 Sw:Q9TU90 FT Sw:Q9TU94 Sw:Q9TU99 Sw:Q9TUA2 Sw:Q9Y4A9 Tr:O42609 Tr:O43789 FT Tr:O70265 Tr:O70266 Tr:O77549 Tr:Q15618 Tr:Q62942 Tr:Q90806 FT Tr:Q9PSJ6 Tr:Q9PSJ9 Tr:Q9QW35 Tr:Q9QW36 Tr:Q9QZ18 Tr:Q9R0F4 FT Tr:Q9R0F9 Tr:Q9TU84 Tr:Q9TU85 Tr:Q9TU87 Tr:Q9TU98 FT Tr:Q9UDD8" FT mRNA join(42031695..42031892,42032421..42032606, FT 42040959..42041066,42042912..42042974,42044614..42045018) FT /gene="C13orf15" FT /locus_tag="RP11-157L14.4-001" FT /product="chromosome 13 open reading frame 15" FT /note="match: ESTs: Em:BG037019 Em:BG705968 Em:BG714093 FT Em:BI596824 Em:BI666744 Em:BI667848" FT /note="match: cDNAs: Em:AF036548 Em:AF036549" FT CDS join(42031844..42031892,42032421..42032606, FT 42040959..42041066,42042912..42042974,42044614..42044621) FT /gene="C13orf15" FT /locus_tag="RP11-157L14.4-001" FT /standard_name="OTTHUMP00000018322" FT /product="chromosome 13 open reading frame 15" FT /note="match: proteins: Tr:Q9UL69 Tr:Q9Z2P4" FT /protein_id="CAC13101.1" FT /translation="MKPPAAQGSPAAAAAAAPALDSAAAEDLSDALCEFDAVLADFASP FT FHERHFHYEEHLERMKRRSSASVSDSSGFSDSESADSLYRNSFSFSDEKLNSPTDSTPA FT LLSATVTPQKAKLGDTKELEAFIADLDKTLASM" FT misc_feature 42034179..42034193 FT /note="Single clone region. Area consistant with digest" FT mRNA join(42038251..42038316,42040959..42041066, FT 42042912..42042980) FT /gene="C13orf15" FT /locus_tag="RP11-157L14.4-002" FT /product="chromosome 13 open reading frame 15" FT /note="match: ESTs: Em:AA281713" FT polyA_signal 42044990..42044995 FT polyA_site 42045018 FT mRNA complement(join(42140961..42142441,42144604..42144842, FT 42149876..42149974,42161648..42161806,42164776..42164901, FT AL160252.20:7528..7636,AL160252.20:13936..14092, FT AL160252.20:17336..17444,AL161417.17:37387..37588, FT AL161417.17:41656..41737,AL161417.17:51488..51683, FT AL161417.17:55795..55949,AL161417.17:56607..56716, FT AL161417.17:57761..57886,AL161417.17:58315..58379, FT AL161417.17:59303..59413,AL161417.17:65512..65711, FT AL161417.17:67833..67971,AL161417.17:69744..69852, FT AL161417.17:86032..86183,AL161417.17:87811..88016, FT AL161417.17:93635..93754,AL161417.17:95983..96118, FT AL161417.17:98521..98596,AL161417.17:127569..127645, FT AL161417.17:144426..144497,AL161417.17:150236..150342, FT AL161417.17:153878..153984,AL163544.24:22360..22475, FT AL163544.24:27833..27910,AL163544.24:30353..30521, FT AL163544.24:41664..41777,AL163544.24:44506..44666)) FT /locus_tag="RP11-157L14.3-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA009500 Em:AA046556 Em:AA195409 FT Em:AA195461 Em:AA330072 Em:AA648780 Em:AI004186 Em:AI039391 FT Em:AI306395 Em:AI478249 Em:AI540219 Em:AI594834 Em:AL598443 FT Em:AW006330 Em:AW611936 Em:AW646924 Em:AW669823 Em:AW955035 FT Em:AW955667 Em:AW959627 Em:BE160295 Em:BE160377 Em:BE222744 FT Em:BE933900 Em:BF088892 Em:BF301233 Em:BF441249 Em:BF988691 FT Em:BF993598 Em:BG085183 Em:BG387662 Em:BG429599 Em:BG506559 FT Em:BG676678 Em:BG861729 Em:BI657092 Em:BI909632 Em:BM562004 FT Em:BM683190 Em:BM692448 Em:BM719254 Em:BM801292 Em:BM877336 FT Em:R15329 Em:Z21184" FT /note="match: cDNAs: Em:AB011136 Em:AK025432" FT CDS complement(join(42142333..42142441,42144604..42144842, FT 42149876..42149974,42161648..42161806,42164776..42164901, FT AL160252.20:7528..7636,AL160252.20:13936..14092, FT AL160252.20:17336..17444,AL161417.17:37387..37588, FT AL161417.17:41656..41737,AL161417.17:51488..51683, FT AL161417.17:55795..55949,AL161417.17:56607..56716, FT AL161417.17:57761..57886,AL161417.17:58315..58379, FT AL161417.17:59303..59413,AL161417.17:65512..65711, FT AL161417.17:67833..67971,AL161417.17:69744..69852, FT AL161417.17:86032..86183,AL161417.17:87811..88016, FT AL161417.17:93635..93754,AL161417.17:95983..96118, FT AL161417.17:98521..98596,AL161417.17:127569..127645, FT AL161417.17:144426..144497,AL161417.17:150236..150342, FT AL161417.17:153878..153984,AL163544.24:22360..22475, FT AL163544.24:27833..27910,AL163544.24:30353..30521, FT AL163544.24:41664..41777,AL163544.24:44506..44663)) FT /locus_tag="RP11-157L14.3-001" FT /standard_name="OTTHUMP00000018323" FT /product="novel protein" FT /note="match: proteins: Tr:O60310" FT /protein_id="CAI39586.1" FT /translation="MTARDLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNA FT GTLAVLQRLIHDRELSLYDGSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIA FT LAEPPVIGSTAHQWLGPEFLTMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFT FT HKLRETQDPTAQSLAASLSTRQLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSAL FT EKNLADATIEINTDDNLEPELKDYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDN FT IQHVIVMEDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTL FT TLQPSVKDGLIVYEDSPLVKAVKLGHILVVDEADKAPTNVTCILKTLVENGEMILADGR FT RIVANSANVNGRENVVVIHPDFRMIVLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPH FT SELEMLRQYGPNVPEPILQKLVAAFGELRSLADQGIINYPYSTREVVNIVKHLQKFPTE FT GLSSVVRNVFDFDSYNNDMREILINTLHKYGIPIGAKPTSVQLAKELTLPEQTFMGYWT FT IGQARSGMQKLLCPVETHHIDIKGPALINIQEYPIERHEERSLNFTEECASWRIPLDEI FT NIICDIATSHENEQNTLYVVTCNPASLYFMNMTGKSGFFVDFFDIFPRTANGVWHPFVT FT VAPLGSPLKGQVVLHEQQSNVILLLDTTGRALHRLILPSEKFTSKKPFWWNKEEAETYK FT MCKEFSHKNWLVFYKEKGNSLTVLDVLEGRTHTISLPINLKTVFLVAEDKWLLVESKTN FT QKYLLTKPAHIESEGSGVCQLYVLKEEPPSTGFGVTQETEFSIPHKISSDQLSSEHLSS FT AVEQKIASPNRILSDEKNYATIVVGFPDLMSPSEVYSWKRPSSLHKRSGTDTSFYRGKK FT KRGTPKQSNCVTLLDTNQVVRILPPGEVPLKDIYPKDVTPPQTSGYIEVTDLQSKKLRY FT IPIPRSESLSPYTTWLSTISDTDALLAEWDKSGVVTVDMGGHIRLWETGLERLQRSLME FT WRNMIGQDDRNMQITINRDSGEDVSSPKHGKEDPDNMPHVGGNTWAGGTGGRDTAGLGG FT KGGPYRLDAGHTVYQVSQAEKDAVPEEVKRAAREMGQRAFQQRLKEIQMSEYDAATYER FT FSGAVRRQVHSLRIILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGEL FT EPQLGSPQQKPKRLRLVVDVSGSMYRFNRMDGRLERTMEAVCMVMEAFENYEEKFQYDI FT VGHSGDGYNIGLVPMNKIPKDNKQRLEILKTMHAHSQFCMSGDHTLEGTEHAIKEIVKE FT EADEYFVIVLSDANLSRYGIHPAKFAQILTRDPQVNAFAIFIGSLGDQATRLQRTLPAG FT RSFVAMDTKDIPQILQQIFTSTMLSSV" FT polyA_site complement(42140961) FT polyA_signal complement(42140988..42140993) FT misc_feature 42171776 FT /note="Clone_right_end: RP11-157L14" FT misc_feature 42173777..42208149 FT /note="annotated region of clone" FT misc_feature 42205696 FT /note="Clone_left_end: RP11-125A7" FT misc_feature 42206149 FT /note="Clone_right_end: RP11-395K16" FT mRNA complement(join(AL354833.9:126056..127536, FT AL354833.9:129699..129937,AL354833.9:134971..135069, FT AL354833.9:146743..146901,AL354833.9:149871..149996, FT 42179304..42179412,42185712..42185868,42189112..42189220, FT AL161417.17:37387..37588,AL161417.17:41656..41737, FT AL161417.17:51488..51683,AL161417.17:55795..55949, FT AL161417.17:56607..56716,AL161417.17:57761..57886, FT AL161417.17:58315..58379,AL161417.17:59303..59413, FT AL161417.17:65512..65711,AL161417.17:67833..67971, FT AL161417.17:69744..69852,AL161417.17:86032..86183, FT AL161417.17:87811..88016,AL161417.17:93635..93754, FT AL161417.17:95983..96118,AL161417.17:98521..98596, FT AL161417.17:127569..127645,AL161417.17:144426..144497, FT AL161417.17:150236..150342,AL161417.17:153878..153984, FT AL163544.24:22360..22475,AL163544.24:27833..27910, FT AL163544.24:30353..30521,AL163544.24:41664..41777, FT AL163544.24:44506..44666)) FT /locus_tag="RP11-157L14.3-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AB011136 Em:AK025432" FT /note="match: ESTs: Em:AA009500 Em:AA046556 Em:AA195409 FT Em:AA195461 Em:AA330072 Em:AA648780 Em:AI004186 Em:AI039391 FT Em:AI306395 Em:AI478249 Em:AI540219 Em:AI594834 Em:AL598443 FT Em:AW006330 Em:AW611936 Em:AW646924 Em:AW669823 Em:AW955035 FT Em:AW955667 Em:AW959627 Em:BE160295 Em:BE160377 Em:BE222744 FT Em:BE933900 Em:BF088892 Em:BF301233 Em:BF441249 Em:BF988691 FT Em:BF993598 Em:BG085183 Em:BG387662 Em:BG429599 Em:BG506559 FT Em:BG676678 Em:BG861729 Em:BI657092 Em:BI909632 Em:BM562004 FT Em:BM683190 Em:BM692448 Em:BM719254 Em:BM801292 Em:BM877336 FT Em:R15329 Em:Z21184" FT CDS complement(join(AL354833.9:127428..127536, FT AL354833.9:129699..129937,AL354833.9:134971..135069, FT AL354833.9:146743..146901,AL354833.9:149871..149996, FT 42179304..42179412,42185712..42185868,42189112..42189220, FT AL161417.17:37387..37588,AL161417.17:41656..41737, FT AL161417.17:51488..51683,AL161417.17:55795..55949, FT AL161417.17:56607..56716,AL161417.17:57761..57886, FT AL161417.17:58315..58379,AL161417.17:59303..59413, FT AL161417.17:65512..65711,AL161417.17:67833..67971, FT AL161417.17:69744..69852,AL161417.17:86032..86183, FT AL161417.17:87811..88016,AL161417.17:93635..93754, FT AL161417.17:95983..96118,AL161417.17:98521..98596, FT AL161417.17:127569..127645,AL161417.17:144426..144497, FT AL161417.17:150236..150342,AL161417.17:153878..153984, FT AL163544.24:22360..22475,AL163544.24:27833..27910, FT AL163544.24:30353..30521,AL163544.24:41664..41777, FT AL163544.24:44506..44663)) FT /locus_tag="RP11-157L14.3-001" FT /standard_name="OTTHUMP00000018323" FT /product="novel protein" FT /note="match: proteins: Tr:O60310" FT /protein_id="CAI40564.1" FT /translation="MTARDLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNA FT GTLAVLQRLIHDRELSLYDGSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIA FT LAEPPVIGSTAHQWLGPEFLTMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFT FT HKLRETQDPTAQSLAASLSTRQLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSAL FT EKNLADATIEINTDDNLEPELKDYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDN FT IQHVIVMEDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTL FT TLQPSVKDGLIVYEDSPLVKAVKLGHILVVDEADKAPTNVTCILKTLVENGEMILADGR FT RIVANSANVNGRENVVVIHPDFRMIVLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPH FT SELEMLRQYGPNVPEPILQKLVAAFGELRSLADQGIINYPYSTREVVNIVKHLQKFPTE FT GLSSVVRNVFDFDSYNNDMREILINTLHKYGIPIGAKPTSVQLAKELTLPEQTFMGYWT FT IGQARSGMQKLLCPVETHHIDIKGPALINIQEYPIERHEERSLNFTEECASWRIPLDEI FT NIICDIATSHENEQNTLYVVTCNPASLYFMNMTGKSGFFVDFFDIFPRTANGVWHPFVT FT VAPLGSPLKGQVVLHEQQSNVILLLDTTGRALHRLILPSEKFTSKKPFWWNKEEAETYK FT MCKEFSHKNWLVFYKEKGNSLTVLDVLEGRTHTISLPINLKTVFLVAEDKWLLVESKTN FT QKYLLTKPAHIESEGSGVCQLYVLKEEPPSTGFGVTQETEFSIPHKISSDQLSSEHLSS FT AVEQKIASPNRILSDEKNYATIVVGFPDLMSPSEVYSWKRPSSLHKRSGTDTSFYRGKK FT KRGTPKQSNCVTLLDTNQVVRILPPGEVPLKDIYPKDVTPPQTSGYIEVTDLQSKKLRY FT IPIPRSESLSPYTTWLSTISDTDALLAEWDKSGVVTVDMGGHIRLWETGLERLQRSLME FT WRNMIGQDDRNMQITINRDSGEDVSSPKHGKEDPDNMPHVGGNTWAGGTGGRDTAGLGG FT KGGPYRLDAGHTVYQVSQAEKDAVPEEVKRAAREMGQRAFQQRLKEIQMSEYDAATYER FT FSGAVRRQVHSLRIILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGEL FT EPQLGSPQQKPKRLRLVVDVSGSMYRFNRMDGRLERTMEAVCMVMEAFENYEEKFQYDI FT VGHSGDGYNIGLVPMNKIPKDNKQRLEILKTMHAHSQFCMSGDHTLEGTEHAIKEIVKE FT EADEYFVIVLSDANLSRYGIHPAKFAQILTRDPQVNAFAIFIGSLGDQATRLQRTLPAG FT RSFVAMDTKDIPQILQQIFTSTMLSSV" FT misc_feature 42208150..42365001 FT /note="annotated region of clone" FT mRNA complement(join(AL354833.9:126056..127536, FT AL354833.9:129699..129937,AL354833.9:134971..135069, FT AL354833.9:146743..146901,AL354833.9:149871..149996, FT AL160252.20:7528..7636,AL160252.20:13936..14092, FT AL160252.20:17336..17444,42245082..42245283, FT 42249351..42249432,42259183..42259378,42263490..42263644, FT 42264302..42264411,42265456..42265581,42266010..42266074, FT 42266998..42267108,42273207..42273406,42275528..42275666, FT 42277439..42277547,42293727..42293878,42295506..42295711, FT 42301330..42301449,42303678..42303813,42306216..42306291, FT 42335264..42335340,42352121..42352192,42357931..42358037, FT 42361573..42361679,AL163544.24:22360..22475, FT AL163544.24:27833..27910,AL163544.24:30353..30521, FT AL163544.24:41664..41777,AL163544.24:44506..44666)) FT /locus_tag="RP11-157L14.3-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AB011136 Em:AK025432" FT /note="match: ESTs: Em:AA009500 Em:AA046556 Em:AA195409 FT Em:AA195461 Em:AA330072 Em:AA648780 Em:AI004186 Em:AI039391 FT Em:AI306395 Em:AI478249 Em:AI540219 Em:AI594834 Em:AL598443 FT Em:AW006330 Em:AW611936 Em:AW646924 Em:AW669823 Em:AW955035 FT Em:AW955667 Em:AW959627 Em:BE160295 Em:BE160377 Em:BE222744 FT Em:BE933900 Em:BF088892 Em:BF301233 Em:BF441249 Em:BF988691 FT Em:BF993598 Em:BG085183 Em:BG387662 Em:BG429599 Em:BG506559 FT Em:BG676678 Em:BG861729 Em:BI657092 Em:BI909632 Em:BM562004 FT Em:BM683190 Em:BM692448 Em:BM719254 Em:BM801292 Em:BM877336 FT Em:R15329 Em:Z21184" FT CDS complement(join(AL354833.9:127428..127536, FT AL354833.9:129699..129937,AL354833.9:134971..135069, FT AL354833.9:146743..146901,AL354833.9:149871..149996, FT AL160252.20:7528..7636,AL160252.20:13936..14092, FT AL160252.20:17336..17444,42245082..42245283, FT 42249351..42249432,42259183..42259378,42263490..42263644, FT 42264302..42264411,42265456..42265581,42266010..42266074, FT 42266998..42267108,42273207..42273406,42275528..42275666, FT 42277439..42277547,42293727..42293878,42295506..42295711, FT 42301330..42301449,42303678..42303813,42306216..42306291, FT 42335264..42335340,42352121..42352192,42357931..42358037, FT 42361573..42361679,AL163544.24:22360..22475, FT AL163544.24:27833..27910,AL163544.24:30353..30521, FT AL163544.24:41664..41777,AL163544.24:44506..44663)) FT /locus_tag="RP11-157L14.3-001" FT /standard_name="OTTHUMP00000018323" FT /product="novel protein" FT /note="match: proteins: Tr:O60310" FT /protein_id="CAI39490.1" FT /translation="MTARDLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNA FT GTLAVLQRLIHDRELSLYDGSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIA FT LAEPPVIGSTAHQWLGPEFLTMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFT FT HKLRETQDPTAQSLAASLSTRQLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSAL FT EKNLADATIEINTDDNLEPELKDYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDN FT IQHVIVMEDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTL FT TLQPSVKDGLIVYEDSPLVKAVKLGHILVVDEADKAPTNVTCILKTLVENGEMILADGR FT RIVANSANVNGRENVVVIHPDFRMIVLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPH FT SELEMLRQYGPNVPEPILQKLVAAFGELRSLADQGIINYPYSTREVVNIVKHLQKFPTE FT GLSSVVRNVFDFDSYNNDMREILINTLHKYGIPIGAKPTSVQLAKELTLPEQTFMGYWT FT IGQARSGMQKLLCPVETHHIDIKGPALINIQEYPIERHEERSLNFTEECASWRIPLDEI FT NIICDIATSHENEQNTLYVVTCNPASLYFMNMTGKSGFFVDFFDIFPRTANGVWHPFVT FT VAPLGSPLKGQVVLHEQQSNVILLLDTTGRALHRLILPSEKFTSKKPFWWNKEEAETYK FT MCKEFSHKNWLVFYKEKGNSLTVLDVLEGRTHTISLPINLKTVFLVAEDKWLLVESKTN FT QKYLLTKPAHIESEGSGVCQLYVLKEEPPSTGFGVTQETEFSIPHKISSDQLSSEHLSS FT AVEQKIASPNRILSDEKNYATIVVGFPDLMSPSEVYSWKRPSSLHKRSGTDTSFYRGKK FT KRGTPKQSNCVTLLDTNQVVRILPPGEVPLKDIYPKDVTPPQTSGYIEVTDLQSKKLRY FT IPIPRSESLSPYTTWLSTISDTDALLAEWDKSGVVTVDMGGHIRLWETGLERLQRSLME FT WRNMIGQDDRNMQITINRDSGEDVSSPKHGKEDPDNMPHVGGNTWAGGTGGRDTAGLGG FT KGGPYRLDAGHTVYQVSQAEKDAVPEEVKRAAREMGQRAFQQRLKEIQMSEYDAATYER FT FSGAVRRQVHSLRIILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGEL FT EPQLGSPQQKPKRLRLVVDVSGSMYRFNRMDGRLERTMEAVCMVMEAFENYEEKFQYDI FT VGHSGDGYNIGLVPMNKIPKDNKQRLEILKTMHAHSQFCMSGDHTLEGTEHAIKEIVKE FT EADEYFVIVLSDANLSRYGIHPAKFAQILTRDPQVNAFAIFIGSLGDQATRLQRTLPAG FT RSFVAMDTKDIPQILQQIFTSTMLSSV" FT misc_feature 42254857 FT /note="Clone_left_end: RP11-383F12" FT polyA_site complement(42293473) FT polyA_signal complement(42293494..42293499) FT mRNA complement(join(42293473..42293878,42295506..42295711, FT 42301330..42301449,42303678..42303813,42306216..42306291, FT 42335264..42335340,42352121..42352192,42357931..42358037, FT 42361573..42361679,AL163544.24:22360..22475, FT AL163544.24:27833..27910,AL163544.24:30353..30521, FT AL163544.24:41664..41777,AL163544.24:44506..44666, FT AL442203.12:18585..18662,AL442203.12:18751..18885, FT AL442203.12:21195..21326,AL442203.12:36236..36340, FT AL442203.12:38769..38877,AL442203.12:39630..39679, FT AL442203.12:40046..40210,AL442203.12:44269..44436, FT AL442203.12:60435..60545,AL442203.12:64887..65017, FT AL442203.12:102785..102862,AL442203.12:113702..113969)) FT /locus_tag="RP11-157L14.3-002" FT /product="novel protein" FT /note="match: cDNAs: Em:BC019143" FT /note="match: ESTs: Em:AI023894 Em:AV376164 Em:AV753122 FT Em:BB625232 Em:BE244690 Em:BF781789 Em:BG429599 Em:BG506559 FT Em:BG969742 Em:BI103110 Em:BI909632 Em:BJ095126 Em:BM127934 FT Em:BM128258 Em:BM152688 Em:BQ557614" FT CDS complement(join(42293723..42293878,42295506..42295711, FT 42301330..42301449,42303678..42303813,42306216..42306291, FT 42335264..42335340,42352121..42352192,42357931..42358037, FT 42361573..42361679,AL163544.24:22360..22475, FT AL163544.24:27833..27910,AL163544.24:30353..30521, FT AL163544.24:41664..41777,AL163544.24:44506..44666, FT AL442203.12:18585..18662,AL442203.12:18751..18885, FT AL442203.12:21195..21326,AL442203.12:36236..36340, FT AL442203.12:38769..38877,AL442203.12:39630..39679, FT AL442203.12:40046..40210,AL442203.12:44269..44436, FT AL442203.12:60435..60545,AL442203.12:64887..65017, FT AL442203.12:102785..102862,AL442203.12:113702..113864)) FT /locus_tag="RP11-157L14.3-002" FT /standard_name="OTTHUMP00000018324" FT /product="novel protein" FT /note="match: proteins: Tr:Q8VCU3 Tr:Q9DBH4" FT /protein_id="CAI39491.1" FT /translation="MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRL FT LHAGSGADTGDTVNIGDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQ FT DVFLIGPPGPLRRSIAMQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCA FT VRAATEGRTLILEGLEKAERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKK FT ELDSWKIVRVSENFRVIALGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSI FT GANVSAEKVSQLLSFATTLCSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWL FT YPYSILLGHEGKMAVEGVLKRFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADK FT EVTIKVPAGTRLLSQPCASDRFIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAK FT NFADTLGYNIEPIMLYQDMTARDLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIH FT RVNAGTLAVLQRLIHDRELSLYDGSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSF FT RIIALAEPPVIGSTAHQWLGPEFLTMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKL FT LSFTHKLRETQDPTAQSLAASLSTRQLLRISRRLSQYPNENLHSAVTKACLSRFLPSLA FT RSALEKNLADATIEINTDDNLEPELKDYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVL FT FYDNIQHVIVMEDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTT FT VQTLTLQPSVKDGLIVYEDSPLVKAVKLGHILVVDEADKAPTNVTCILKTLVENGEMIL FT ADGRRIVANSANVNGRENVVVIHPDFRMIVLANRPGFPFLGNDFFGTLGDIFSCHAVDN FT PKPHSELEMLRQYGPNVPEPILQKLVAAFGELRSLADQGIINYPYSTREVVNIVKHLQK FT FPTEGLSSVVRNVFDFDSYNNDMREILINTLHKYGIPIGAKPTSVQLAKE" FT misc_feature 42364547 FT /note="Clone_right_end: RP11-125A7" FT misc_feature 42365002..42423287 FT /note="annotated region of clone" FT misc_feature 42386697..42386921 FT /note="Sequence from clone PCR only" FT mRNA complement(join(AL354833.9:126056..127536, FT AL354833.9:129699..129937,AL354833.9:134971..135069, FT AL354833.9:146743..146901,AL354833.9:149871..149996, FT AL160252.20:7528..7636,AL160252.20:13936..14092, FT AL160252.20:17336..17444,AL161417.17:37387..37588, FT AL161417.17:41656..41737,AL161417.17:51488..51683, FT AL161417.17:55795..55949,AL161417.17:56607..56716, FT AL161417.17:57761..57886,AL161417.17:58315..58379, FT AL161417.17:59303..59413,AL161417.17:65512..65711, FT AL161417.17:67833..67971,AL161417.17:69744..69852, FT AL161417.17:86032..86183,AL161417.17:87811..88016, FT AL161417.17:93635..93754,AL161417.17:95983..96118, FT AL161417.17:98521..98596,AL161417.17:127569..127645, FT AL161417.17:144426..144497,AL161417.17:150236..150342, FT AL161417.17:153878..153984,42385361..42385476, FT 42390834..42390911,42393354..42393522,42404665..42404778, FT 42407507..42407667)) FT /locus_tag="RP11-157L14.3-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AB011136 Em:AK025432" FT /note="match: ESTs: Em:AA009500 Em:AA046556 Em:AA195409 FT Em:AA195461 Em:AA330072 Em:AA648780 Em:AI004186 Em:AI039391 FT Em:AI306395 Em:AI478249 Em:AI540219 Em:AI594834 Em:AL598443 FT Em:AW006330 Em:AW611936 Em:AW646924 Em:AW669823 Em:AW955035 FT Em:AW955667 Em:AW959627 Em:BE160295 Em:BE160377 Em:BE222744 FT Em:BE933900 Em:BF088892 Em:BF301233 Em:BF441249 Em:BF988691 FT Em:BF993598 Em:BG085183 Em:BG387662 Em:BG429599 Em:BG506559 FT Em:BG676678 Em:BG861729 Em:BI657092 Em:BI909632 Em:BM562004 FT Em:BM683190 Em:BM692448 Em:BM719254 Em:BM801292 Em:BM877336 FT Em:R15329 Em:Z21184" FT CDS complement(join(AL354833.9:127428..127536, FT AL354833.9:129699..129937,AL354833.9:134971..135069, FT AL354833.9:146743..146901,AL354833.9:149871..149996, FT AL160252.20:7528..7636,AL160252.20:13936..14092, FT AL160252.20:17336..17444,AL161417.17:37387..37588, FT AL161417.17:41656..41737,AL161417.17:51488..51683, FT AL161417.17:55795..55949,AL161417.17:56607..56716, FT AL161417.17:57761..57886,AL161417.17:58315..58379, FT AL161417.17:59303..59413,AL161417.17:65512..65711, FT AL161417.17:67833..67971,AL161417.17:69744..69852, FT AL161417.17:86032..86183,AL161417.17:87811..88016, FT AL161417.17:93635..93754,AL161417.17:95983..96118, FT AL161417.17:98521..98596,AL161417.17:127569..127645, FT AL161417.17:144426..144497,AL161417.17:150236..150342, FT AL161417.17:153878..153984,42385361..42385476, FT 42390834..42390911,42393354..42393522,42404665..42404778, FT 42407507..42407664)) FT /locus_tag="RP11-157L14.3-001" FT /standard_name="OTTHUMP00000018323" FT /product="novel protein" FT /note="match: proteins: Tr:O60310" FT /protein_id="CAI40169.1" FT /translation="MTARDLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNA FT GTLAVLQRLIHDRELSLYDGSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIA FT LAEPPVIGSTAHQWLGPEFLTMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFT FT HKLRETQDPTAQSLAASLSTRQLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSAL FT EKNLADATIEINTDDNLEPELKDYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDN FT IQHVIVMEDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTL FT TLQPSVKDGLIVYEDSPLVKAVKLGHILVVDEADKAPTNVTCILKTLVENGEMILADGR FT RIVANSANVNGRENVVVIHPDFRMIVLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPH FT SELEMLRQYGPNVPEPILQKLVAAFGELRSLADQGIINYPYSTREVVNIVKHLQKFPTE FT GLSSVVRNVFDFDSYNNDMREILINTLHKYGIPIGAKPTSVQLAKELTLPEQTFMGYWT FT IGQARSGMQKLLCPVETHHIDIKGPALINIQEYPIERHEERSLNFTEECASWRIPLDEI FT NIICDIATSHENEQNTLYVVTCNPASLYFMNMTGKSGFFVDFFDIFPRTANGVWHPFVT FT VAPLGSPLKGQVVLHEQQSNVILLLDTTGRALHRLILPSEKFTSKKPFWWNKEEAETYK FT MCKEFSHKNWLVFYKEKGNSLTVLDVLEGRTHTISLPINLKTVFLVAEDKWLLVESKTN FT QKYLLTKPAHIESEGSGVCQLYVLKEEPPSTGFGVTQETEFSIPHKISSDQLSSEHLSS FT AVEQKIASPNRILSDEKNYATIVVGFPDLMSPSEVYSWKRPSSLHKRSGTDTSFYRGKK FT KRGTPKQSNCVTLLDTNQVVRILPPGEVPLKDIYPKDVTPPQTSGYIEVTDLQSKKLRY FT IPIPRSESLSPYTTWLSTISDTDALLAEWDKSGVVTVDMGGHIRLWETGLERLQRSLME FT WRNMIGQDDRNMQITINRDSGEDVSSPKHGKEDPDNMPHVGGNTWAGGTGGRDTAGLGG FT KGGPYRLDAGHTVYQVSQAEKDAVPEEVKRAAREMGQRAFQQRLKEIQMSEYDAATYER FT FSGAVRRQVHSLRIILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGEL FT EPQLGSPQQKPKRLRLVVDVSGSMYRFNRMDGRLERTMEAVCMVMEAFENYEEKFQYDI FT VGHSGDGYNIGLVPMNKIPKDNKQRLEILKTMHAHSQFCMSGDHTLEGTEHAIKEIVKE FT EADEYFVIVLSDANLSRYGIHPAKFAQILTRDPQVNAFAIFIGSLGDQATRLQRTLPAG FT RSFVAMDTKDIPQILQQIFTSTMLSSV" FT misc_feature 42419288 FT /note="Clone_left_end: RP11-12I24" FT mRNA complement(join(AL161417.17:85778..86183, FT AL161417.17:87811..88016,AL161417.17:93635..93754, FT AL161417.17:95983..96118,AL161417.17:98521..98596, FT AL161417.17:127569..127645,AL161417.17:144426..144497, FT AL161417.17:150236..150342,AL161417.17:153878..153984, FT 42385361..42385476,42390834..42390911,42393354..42393522, FT 42404665..42404778,42407507..42407667, FT AL442203.12:18585..18662,AL442203.12:18751..18885, FT AL442203.12:21195..21326,AL442203.12:36236..36340, FT AL442203.12:38769..38877,AL442203.12:39630..39679, FT AL442203.12:40046..40210,AL442203.12:44269..44436, FT AL442203.12:60435..60545,AL442203.12:64887..65017, FT AL442203.12:102785..102862,AL442203.12:113702..113969)) FT /locus_tag="RP11-157L14.3-002" FT /product="novel protein" FT /note="match: cDNAs: Em:BC019143" FT /note="match: ESTs: Em:AI023894 Em:AV376164 Em:AV753122 FT Em:BB625232 Em:BE244690 Em:BF781789 Em:BG429599 Em:BG506559 FT Em:BG969742 Em:BI103110 Em:BI909632 Em:BJ095126 Em:BM127934 FT Em:BM128258 Em:BM152688 Em:BQ557614" FT CDS complement(join(AL161417.17:86028..86183, FT AL161417.17:87811..88016,AL161417.17:93635..93754, FT AL161417.17:95983..96118,AL161417.17:98521..98596, FT AL161417.17:127569..127645,AL161417.17:144426..144497, FT AL161417.17:150236..150342,AL161417.17:153878..153984, FT 42385361..42385476,42390834..42390911,42393354..42393522, FT 42404665..42404778,42407507..42407667, FT AL442203.12:18585..18662,AL442203.12:18751..18885, FT AL442203.12:21195..21326,AL442203.12:36236..36340, FT AL442203.12:38769..38877,AL442203.12:39630..39679, FT AL442203.12:40046..40210,AL442203.12:44269..44436, FT AL442203.12:60435..60545,AL442203.12:64887..65017, FT AL442203.12:102785..102862,AL442203.12:113702..113864)) FT /locus_tag="RP11-157L14.3-002" FT /standard_name="OTTHUMP00000018324" FT /product="novel protein" FT /note="match: proteins: Tr:Q8VCU3 Tr:Q9DBH4" FT /protein_id="CAI40170.1" FT /translation="MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRL FT LHAGSGADTGDTVNIGDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQ FT DVFLIGPPGPLRRSIAMQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCA FT VRAATEGRTLILEGLEKAERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKK FT ELDSWKIVRVSENFRVIALGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSI FT GANVSAEKVSQLLSFATTLCSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWL FT YPYSILLGHEGKMAVEGVLKRFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADK FT EVTIKVPAGTRLLSQPCASDRFIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAK FT NFADTLGYNIEPIMLYQDMTARDLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIH FT RVNAGTLAVLQRLIHDRELSLYDGSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSF FT RIIALAEPPVIGSTAHQWLGPEFLTMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKL FT LSFTHKLRETQDPTAQSLAASLSTRQLLRISRRLSQYPNENLHSAVTKACLSRFLPSLA FT RSALEKNLADATIEINTDDNLEPELKDYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVL FT FYDNIQHVIVMEDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTT FT VQTLTLQPSVKDGLIVYEDSPLVKAVKLGHILVVDEADKAPTNVTCILKTLVENGEMIL FT ADGRRIVANSANVNGRENVVVIHPDFRMIVLANRPGFPFLGNDFFGTLGDIFSCHAVDN FT PKPHSELEMLRQYGPNVPEPILQKLVAAFGELRSLADQGIINYPYSTREVVNIVKHLQK FT FPTEGLSSVVRNVFDFDSYNNDMREILINTLHKYGIPIGAKPTSVQLAKE" FT misc_feature 42423288..42584798 FT /note="annotated region of clone" FT mRNA complement(join(42439727..42439949,42440038..42440172, FT 42442482..42442539)) FT /locus_tag="RP11-157L14.3-004" FT /product="novel protein" FT /note="match: ESTs: Em:AI300333 Em:BI833332" FT misc_feature 42453714..42453864 FT /note="Sequence from uni-directional dGTP reads only" FT misc_feature 42470946..42470998 FT /note="sequence from uni-directional dGTP reads only" FT CDS 42499734..42501485 FT /pseudo FT /locus_tag="RP11-12I24.2-001" FT /product="lysyl-tRNA synthetase (KARS) pseudogene" FT /note="match: proteins: Sw:O67258 Sw:P15180 Sw:Q15046 FT Sw:Q22099 Sw:Q8YPW9 Sw:Q99MN1 Tr:Q8SXM8 Tr:Q95ZQ3 Tr:Q9HB23 FT Tr:Q9LJE2 Tr:Q9UUE6 Tr:Q9W327" FT polyA_signal 42501656..42501661 FT misc_feature 42523577 FT /note="Clone_left_end: RP11-187A9" FT mRNA complement(join(42433443..42434107,42439871..42439949, FT 42440038..42440172,42442482..42442613,42457523..42457627, FT 42460056..42460164,42460917..42460966,42461333..42461497, FT 42465556..42465723,42481722..42481832,42486174..42486304, FT 42524072..42524149,42534989..42535189)) FT /locus_tag="RP11-157L14.3-003" FT /product="novel protein" FT /note="match: cDNAs: Em:AK004956" FT CDS complement(join(42434088..42434107,42439871..42439949, FT 42440038..42440172,42442482..42442613,42457523..42457627, FT 42460056..42460164,42460917..42460966,42461333..42461497, FT 42465556..42465723,42481722..42481832,42486174..42486304, FT 42524072..42524149,42534989..42535151)) FT /locus_tag="RP11-157L14.3-003" FT /standard_name="OTTHUMP00000018325" FT /product="novel protein" FT /protein_id="CAH70372.1" FT /translation="MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRL FT LHAGSGADTGDTVNIGDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQ FT DVFLIGPPGPLRRSIAMQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCA FT VRAATEGRTLILEGLEKAERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKK FT ELDSWKIVRVSENFRVIALGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSI FT GANVSAEKVSQLLSFATTLCSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWL FT YPYSILLGHEGKMAVEGVLKRFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADK FT EVTIKVPAGTRLLSQPCASDRFIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAK FT NFADTLGYNIEPIMLYQEKVPEV" FT mRNA complement(join(AL161417.17:85778..86183, FT AL161417.17:87811..88016,AL161417.17:93635..93754, FT AL161417.17:95983..96118,AL161417.17:98521..98596, FT AL161417.17:127569..127645,AL161417.17:144426..144497, FT AL161417.17:150236..150342,AL161417.17:153878..153984, FT AL163544.24:22360..22475,AL163544.24:27833..27910, FT AL163544.24:30353..30521,AL163544.24:41664..41777, FT AL163544.24:44506..44666,42439872..42439949, FT 42440038..42440172,42442482..42442613,42457523..42457627, FT 42460056..42460164,42460917..42460966,42461333..42461497, FT 42465556..42465723,42481722..42481832,42486174..42486304, FT 42524072..42524149,42534989..42535256)) FT /locus_tag="RP11-157L14.3-002" FT /product="novel protein" FT /note="match: ESTs: Em:AI023894 Em:AV376164 Em:AV753122 FT Em:BB625232 Em:BE244690 Em:BF781789 Em:BG429599 Em:BG506559 FT Em:BG969742 Em:BI103110 Em:BI909632 Em:BJ095126 Em:BM127934 FT Em:BM128258 Em:BM152688 Em:BQ557614" FT /note="match: cDNAs: Em:BC019143" FT CDS complement(join(AL161417.17:86028..86183, FT AL161417.17:87811..88016,AL161417.17:93635..93754, FT AL161417.17:95983..96118,AL161417.17:98521..98596, FT AL161417.17:127569..127645,AL161417.17:144426..144497, FT AL161417.17:150236..150342,AL161417.17:153878..153984, FT AL163544.24:22360..22475,AL163544.24:27833..27910, FT AL163544.24:30353..30521,AL163544.24:41664..41777, FT AL163544.24:44506..44666,42439872..42439949, FT 42440038..42440172,42442482..42442613,42457523..42457627, FT 42460056..42460164,42460917..42460966,42461333..42461497, FT 42465556..42465723,42481722..42481832,42486174..42486304, FT 42524072..42524149,42534989..42535151)) FT /locus_tag="RP11-157L14.3-002" FT /standard_name="OTTHUMP00000018324" FT /product="novel protein" FT /note="match: proteins: Tr:Q8VCU3 Tr:Q9DBH4" FT /protein_id="CAH70373.1" FT /translation="MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRL FT LHAGSGADTGDTVNIGDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQ FT DVFLIGPPGPLRRSIAMQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCA FT VRAATEGRTLILEGLEKAERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKK FT ELDSWKIVRVSENFRVIALGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSI FT GANVSAEKVSQLLSFATTLCSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWL FT YPYSILLGHEGKMAVEGVLKRFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADK FT EVTIKVPAGTRLLSQPCASDRFIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAK FT NFADTLGYNIEPIMLYQDMTARDLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIH FT RVNAGTLAVLQRLIHDRELSLYDGSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSF FT RIIALAEPPVIGSTAHQWLGPEFLTMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKL FT LSFTHKLRETQDPTAQSLAASLSTRQLLRISRRLSQYPNENLHSAVTKACLSRFLPSLA FT RSALEKNLADATIEINTDDNLEPELKDYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVL FT FYDNIQHVIVMEDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLLNRPREYIQLHRDTT FT VQTLTLQPSVKDGLIVYEDSPLVKAVKLGHILVVDEADKAPTNVTCILKTLVENGEMIL FT ADGRRIVANSANVNGRENVVVIHPDFRMIVLANRPGFPFLGNDFFGTLGDIFSCHAVDN FT PKPHSELEMLRQYGPNVPEPILQKLVAAFGELRSLADQGIINYPYSTREVVNIVKHLQK FT FPTEGLSSVVRNVFDFDSYNNDMREILINTLHKYGIPIGAKPTSVQLAKE" FT CDS <42577566..>42577773 FT /pseudo FT /locus_tag="RP11-12I24.3-001" FT /product="ribosomal protein S28 (RPS28) pseudogene" FT /note="match: proteins: Sw:P62857 Sw:P62857 Sw:P62858 FT Sw:P62858 Sw:P62858 Sw:P62859 Sw:Q10421 Sw:Q90YP3 FT Tr:Q99PF7" FT misc_feature 42582798 FT /note="Clone_right_end: RP11-12I24" FT misc_feature 42584799..42648107 FT /note="annotated region of clone" FT misc_feature 42612902..42612969 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(42617863..42618084,42618243..42618383)) FT /locus_tag="RP11-187A9.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:H95008.1" FT misc_feature 42620751..42620863 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT mRNA join(42622889..42623101,AL139328.8:53492..53602, FT AL139328.8:55581..55661,AL139328.8:81320..81424, FT AL139328.8:81696..81828,AL139328.8:85295..85401, FT AL139328.8:86040..86165,AL139328.8:91360..91462, FT AL139328.8:92544..92703,AL139328.8:94469..94577, FT AL139328.8:94708..94847,AL139328.8:100089..100173, FT AL139328.8:104164..104249,AL139328.8:113078..113177, FT AL139328.8:115065..115338,AL139328.8:116432..116554, FT AL139328.8:120914..121045,AL139328.8:124507..124624, FT AL139328.8:125595..125705,AL139328.8:125842..125938, FT AL139328.8:132068..132175,AL139328.8:134988..135101, FT AL139328.8:135360..135494,AL139328.8:136631..136794, FT AL139328.8:140536..140641,AL139328.8:141604..141696, FT AL139328.8:145259..145378,AL139328.8:145715..145823, FT complement(AL136527.9:139402..140055)) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-001" FT /product="diacylglycerol kinase, eta" FT /note="match: cDNAs: Em:AB078967.1 Em:AK098302.1" FT /note="match: ESTs: Em:AI382581.1 Em:BF366005.1 FT Em:BG285439.1 Em:BU101576.1 Em:BU101813.1 Em:BX955520.1 FT Em:DA112118.1 Em:DB060523.1 Em:DB258176.1 Em:DT932679.1" FT mRNA join(42622889..42623101,AL139328.8:53492..53602, FT AL139328.8:55581..55661,AL139328.8:81320..81424, FT AL139328.8:81696..81828,AL139328.8:85295..85401, FT AL139328.8:86040..86165,AL139328.8:91360..91462, FT AL139328.8:92544..92703,AL139328.8:94469..94577, FT AL139328.8:94708..94847,AL139328.8:100089..100173, FT AL139328.8:104164..104249,AL139328.8:113078..113177, FT AL139328.8:115065..115338,AL139328.8:116432..116554, FT AL139328.8:120914..121045,AL139328.8:124507..124624, FT AL139328.8:125595..125705,AL139328.8:125842..125938, FT AL139328.8:132068..132175,AL139328.8:134988..135101, FT AL139328.8:135360..135494,AL139328.8:136631..136794, FT AL139328.8:140536..140641,AL139328.8:141604..141696, FT AL139328.8:145259..145378,AL139328.8:145715..145823, FT AL139328.8:147293..147423, FT complement(AL136527.9:139404..140055)) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-004" FT /product="diacylglycerol kinase, eta" FT /note="match: cDNAs: Em:AB078968.1 Em:AL833883.1" FT CDS join(42622910..42623101,AL139328.8:53492..53602, FT AL139328.8:55581..55661,AL139328.8:81320..81424, FT AL139328.8:81696..81828,AL139328.8:85295..85401, FT AL139328.8:86040..86165,AL139328.8:91360..91462, FT AL139328.8:92544..92703,AL139328.8:94469..94577, FT AL139328.8:94708..94847,AL139328.8:100089..100173, FT AL139328.8:104164..104249,AL139328.8:113078..113177, FT AL139328.8:115065..115338,AL139328.8:116432..116554, FT AL139328.8:120914..121045,AL139328.8:124507..124624, FT AL139328.8:125595..125705,AL139328.8:125842..125938, FT AL139328.8:132068..132175,AL139328.8:134988..135101, FT AL139328.8:135360..135494,AL139328.8:136631..136794, FT AL139328.8:140536..140641,AL139328.8:141604..141696, FT AL139328.8:145259..145378,AL139328.8:145715..145823, FT complement(AL136527.9:140003..140055)) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-001" FT /standard_name="OTTHUMP00000018326" FT /product="diacylglycerol kinase, eta" FT /protein_id="CAH71062.2" FT /translation="MAGAGGQHHPPGAAGGAAAGAGAAVTSAAASAGPGEDSSDSEAEQ FT EGPQKLIRKVSTSGQIRTKTSIKEGQLLKQTSSFQRWKKRYFKLRGRTLYYAKDSKSLI FT FDEVDLSDASVAEASTKNANNSFTIITPFRRLMLCAENRKEMEDWISSLKSVQTREPYE FT VAQFNVEHFSGMHNWYACSHARPTFCNVCRESLSGVTSHGLSCEVCKFKAHKRCAVRAT FT NNCKWTTLASIGKDIIEDEDGVAMPHQWLEGNLPVSAKCAVCDKTCGSVLRLQDWKCLW FT CKTMVHTACKDLYHPICPLGQCKVSIIPPIALNSTDSDGFCRATFSFCVSPLLVFVNSK FT SGDNQGVKFLRRFKQLLNPAQVFDLMNGGPHLGLRLFQKFDNFRILVCGGDGSVGWVLS FT EIDKLNLNKQCQLGVLPLGTGNDLARVLGWGGSYDDDTQLPQILEKLERASTKMLDRWS FT IMTYELKLPPKASLLPGPPEASEEFYMTIYEDSVATHLTKILNSDEHAVVISSAKTLCE FT TVKDFVAKVEKTYDKTLENAVVADAVASKCSVLNEKLEQLLQALHTDSQAAPVLPGLSP FT LIVEEDAVESSSEESLGESKEQLGDDVTKPSSQKAVKPREIMLRANSLKKAVRQVIEEA FT GKVMDDPTVHPCEPANQSSDYDSTETDESKEEAKDDGAKESITVKTAPRSPDARASYGH FT SQTDSVPGPAVAASKENLPVLNTRIICPGLRAGLAASIAGSSIINKMLLANIDPFGATP FT FIDPDLDSVDGYSEKCVMNNYFGIGLDAKISLEFNNKREEHPEKCRSRTKNLMWYGVLG FT TRELLQRSYKNLEQRVQLECDGQYIPLPSLQGIAVLNIPSYAGGTNFWGGTKEDDIFAA FT PSFDDKILEVVAIFDSMQMAVSRVIKLQHHRIAQCRTVKITIFGDEGVPVQVDGEAWVQ FT PPGIIKIVHKNRAQMLTRDRAFESTLKSWEDKQKCDSGKPVLRTHLYIHHAIDLATEEV FT SQMQLCSQAAEELITRICDAATIHCLLEQELAHAVNACSHALNKANPRCPESLTRDTAT FT EIAINVKALYNETESLLVGRVPLQLESPHEERVSNALHSVEVELQKLTEIPWLYYILHP FT NEDEEPPMDCTKRNNRSTVFRIVPKFKKEKVQKQKTSSQPGSGDTESGSCEANSPGN" FT CDS join(42622910..42623101,AL139328.8:53492..53602, FT AL139328.8:55581..55661,AL139328.8:81320..81424, FT AL139328.8:81696..81828,AL139328.8:85295..85401, FT AL139328.8:86040..86165,AL139328.8:91360..91462, FT AL139328.8:92544..92703,AL139328.8:94469..94577, FT AL139328.8:94708..94847,AL139328.8:100089..100173, FT AL139328.8:104164..104249,AL139328.8:113078..113177, FT AL139328.8:115065..115338,AL139328.8:116432..116554, FT AL139328.8:120914..121045,AL139328.8:124507..124624, FT AL139328.8:125595..125705,AL139328.8:125842..125938, FT AL139328.8:132068..132175,AL139328.8:134988..135101, FT AL139328.8:135360..135494,AL139328.8:136631..136794, FT AL139328.8:140536..140641,AL139328.8:141604..141696, FT AL139328.8:145259..145378,AL139328.8:145715..145823, FT AL139328.8:147293..147423, FT complement(AL136527.9:139966..140055)) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-004" FT /standard_name="OTTHUMP00000178584" FT /product="diacylglycerol kinase, eta" FT /note="match: proteins: Sw:Q86XP1.1" FT /protein_id="CAM13770.1" FT /translation="MAGAGGQHHPPGAAGGAAAGAGAAVTSAAASAGPGEDSSDSEAEQ FT EGPQKLIRKVSTSGQIRTKTSIKEGQLLKQTSSFQRWKKRYFKLRGRTLYYAKDSKSLI FT FDEVDLSDASVAEASTKNANNSFTIITPFRRLMLCAENRKEMEDWISSLKSVQTREPYE FT VAQFNVEHFSGMHNWYACSHARPTFCNVCRESLSGVTSHGLSCEVCKFKAHKRCAVRAT FT NNCKWTTLASIGKDIIEDEDGVAMPHQWLEGNLPVSAKCAVCDKTCGSVLRLQDWKCLW FT CKTMVHTACKDLYHPICPLGQCKVSIIPPIALNSTDSDGFCRATFSFCVSPLLVFVNSK FT SGDNQGVKFLRRFKQLLNPAQVFDLMNGGPHLGLRLFQKFDNFRILVCGGDGSVGWVLS FT EIDKLNLNKQCQLGVLPLGTGNDLARVLGWGGSYDDDTQLPQILEKLERASTKMLDRWS FT IMTYELKLPPKASLLPGPPEASEEFYMTIYEDSVATHLTKILNSDEHAVVISSAKTLCE FT TVKDFVAKVEKTYDKTLENAVVADAVASKCSVLNEKLEQLLQALHTDSQAAPVLPGLSP FT LIVEEDAVESSSEESLGESKEQLGDDVTKPSSQKAVKPREIMLRANSLKKAVRQVIEEA FT GKVMDDPTVHPCEPANQSSDYDSTETDESKEEAKDDGAKESITVKTAPRSPDARASYGH FT SQTDSVPGPAVAASKENLPVLNTRIICPGLRAGLAASIAGSSIINKMLLANIDPFGATP FT FIDPDLDSVDGYSEKCVMNNYFGIGLDAKISLEFNNKREEHPEKCRSRTKNLMWYGVLG FT TRELLQRSYKNLEQRVQLECDGQYIPLPSLQGIAVLNIPSYAGGTNFWGGTKEDDIFAA FT PSFDDKILEVVAIFDSMQMAVSRVIKLQHHRIAQCRTVKITIFGDEGVPVQVDGEAWVQ FT PPGIIKIVHKNRAQMLTRDRAFESTLKSWEDKQKCDSGKPVLRTHLYIHHAIDLATEEV FT SQMQLCSQAAEELITRICDAATIHCLLEQELAHAVNACSHALNKANPRCPESLTRDTAT FT EIAINVKALYNETESLLVGRVPLQLESPHEERVSNALHSVEVELQKLTEIPWLYYILHP FT NEDEEPPMDCTKRNNRSTVFRIVPKFKKEKVQKQKTSSQPVQKWGTEEVAAWLDLLNLG FT EYKDIFIRHDIRGAELLHLERRDLKDLGIPKVGHVKRILQGIKELGRSTPQSEV" FT CDS complement(42643068..42645229) FT /pseudo FT /locus_tag="RP11-187A9.2-001" FT /product="mitogen-activated protein kinase 6 (MAPK6) FT pseudogene" FT /note="match: proteins: Sw:P27704 Sw:Q16659 Sw:Q16659 FT Sw:Q61532 Sw:Q61532" FT misc_feature 42648108..42796537 FT /note="annotated region of clone" FT misc_feature 42648108 FT /note="Clone_left_end: RP11-84N7" FT mRNA join(AL157932.21:40091..40303,42701599..42701709, FT 42703688..42703768,42729427..42729531,42729803..42729935, FT 42733402..42733508,42734147..42734272,42739467..42739569, FT 42740651..42740810,42742576..42742684,42742815..42742954, FT 42748196..42748280,42752271..42752356,42761185..42761284, FT 42763172..42763445,42764539..42764661,42769021..42769152, FT 42772614..42772731,42773702..42773812,42773949..42774045, FT 42780175..42780282,42783095..42783208,42783467..42783601, FT 42784738..42784901,42788643..42788748,42789711..42789803, FT 42793366..42793485,42793822..42793930, FT complement(AL136527.9:139402..140055)) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-001" FT /product="diacylglycerol kinase, eta" FT /note="match: cDNAs: Em:AB078967.1 Em:AK098302.1" FT /note="match: ESTs: Em:AI382581.1 Em:BF366005.1 FT Em:BG285439.1 Em:BU101576.1 Em:BU101813.1 Em:BX955520.1 FT Em:DA112118.1 Em:DB060523.1 Em:DB258176.1 Em:DT932679.1" FT mRNA join(AL157932.21:40091..40303,42701599..42701709, FT 42703688..42703768,42729427..42729531,42729803..42729935, FT 42733402..42733508,42734147..42734272,42739467..42739569, FT 42740651..42740810,42742576..42742684,42742815..42742954, FT 42748196..42748280,42752271..42752356,42761185..42761284, FT 42763172..42763445,42764539..42764661,42769021..42769152, FT 42772614..42772731,42773702..42773812,42773949..42774045, FT 42780175..42780282,42783095..42783208,42783467..42783601, FT 42784738..42784901,42788643..42788748,42789711..42789803, FT 42793366..42793485,42793822..42793930,42795400..42795530, FT complement(AL136527.9:139404..140055)) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-004" FT /product="diacylglycerol kinase, eta" FT /note="match: cDNAs: Em:AB078968.1 Em:AL833883.1" FT CDS join(AL157932.21:40112..40303,42701599..42701709, FT 42703688..42703768,42729427..42729531,42729803..42729935, FT 42733402..42733508,42734147..42734272,42739467..42739569, FT 42740651..42740810,42742576..42742684,42742815..42742954, FT 42748196..42748280,42752271..42752356,42761185..42761284, FT 42763172..42763445,42764539..42764661,42769021..42769152, FT 42772614..42772731,42773702..42773812,42773949..42774045, FT 42780175..42780282,42783095..42783208,42783467..42783601, FT 42784738..42784901,42788643..42788748,42789711..42789803, FT 42793366..42793485,42793822..42793930, FT complement(AL136527.9:140003..140055)) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-001" FT /standard_name="OTTHUMP00000018326" FT /product="diacylglycerol kinase, eta" FT /protein_id="CAI16894.2" FT /translation="MAGAGGQHHPPGAAGGAAAGAGAAVTSAAASAGPGEDSSDSEAEQ FT EGPQKLIRKVSTSGQIRTKTSIKEGQLLKQTSSFQRWKKRYFKLRGRTLYYAKDSKSLI FT FDEVDLSDASVAEASTKNANNSFTIITPFRRLMLCAENRKEMEDWISSLKSVQTREPYE FT VAQFNVEHFSGMHNWYACSHARPTFCNVCRESLSGVTSHGLSCEVCKFKAHKRCAVRAT FT NNCKWTTLASIGKDIIEDEDGVAMPHQWLEGNLPVSAKCAVCDKTCGSVLRLQDWKCLW FT CKTMVHTACKDLYHPICPLGQCKVSIIPPIALNSTDSDGFCRATFSFCVSPLLVFVNSK FT SGDNQGVKFLRRFKQLLNPAQVFDLMNGGPHLGLRLFQKFDNFRILVCGGDGSVGWVLS FT EIDKLNLNKQCQLGVLPLGTGNDLARVLGWGGSYDDDTQLPQILEKLERASTKMLDRWS FT IMTYELKLPPKASLLPGPPEASEEFYMTIYEDSVATHLTKILNSDEHAVVISSAKTLCE FT TVKDFVAKVEKTYDKTLENAVVADAVASKCSVLNEKLEQLLQALHTDSQAAPVLPGLSP FT LIVEEDAVESSSEESLGESKEQLGDDVTKPSSQKAVKPREIMLRANSLKKAVRQVIEEA FT GKVMDDPTVHPCEPANQSSDYDSTETDESKEEAKDDGAKESITVKTAPRSPDARASYGH FT SQTDSVPGPAVAASKENLPVLNTRIICPGLRAGLAASIAGSSIINKMLLANIDPFGATP FT FIDPDLDSVDGYSEKCVMNNYFGIGLDAKISLEFNNKREEHPEKCRSRTKNLMWYGVLG FT TRELLQRSYKNLEQRVQLECDGQYIPLPSLQGIAVLNIPSYAGGTNFWGGTKEDDIFAA FT PSFDDKILEVVAIFDSMQMAVSRVIKLQHHRIAQCRTVKITIFGDEGVPVQVDGEAWVQ FT PPGIIKIVHKNRAQMLTRDRAFESTLKSWEDKQKCDSGKPVLRTHLYIHHAIDLATEEV FT SQMQLCSQAAEELITRICDAATIHCLLEQELAHAVNACSHALNKANPRCPESLTRDTAT FT EIAINVKALYNETESLLVGRVPLQLESPHEERVSNALHSVEVELQKLTEIPWLYYILHP FT NEDEEPPMDCTKRNNRSTVFRIVPKFKKEKVQKQKTSSQPGSGDTESGSCEANSPGN" FT CDS join(AL157932.21:40112..40303,42701599..42701709, FT 42703688..42703768,42729427..42729531,42729803..42729935, FT 42733402..42733508,42734147..42734272,42739467..42739569, FT 42740651..42740810,42742576..42742684,42742815..42742954, FT 42748196..42748280,42752271..42752356,42761185..42761284, FT 42763172..42763445,42764539..42764661,42769021..42769152, FT 42772614..42772731,42773702..42773812,42773949..42774045, FT 42780175..42780282,42783095..42783208,42783467..42783601, FT 42784738..42784901,42788643..42788748,42789711..42789803, FT 42793366..42793485,42793822..42793930,42795400..42795530, FT complement(AL136527.9:139966..140055)) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-004" FT /standard_name="OTTHUMP00000178584" FT /product="diacylglycerol kinase, eta" FT /note="match: proteins: Sw:Q86XP1.1" FT /protein_id="CAM23676.1" FT /translation="MAGAGGQHHPPGAAGGAAAGAGAAVTSAAASAGPGEDSSDSEAEQ FT EGPQKLIRKVSTSGQIRTKTSIKEGQLLKQTSSFQRWKKRYFKLRGRTLYYAKDSKSLI FT FDEVDLSDASVAEASTKNANNSFTIITPFRRLMLCAENRKEMEDWISSLKSVQTREPYE FT VAQFNVEHFSGMHNWYACSHARPTFCNVCRESLSGVTSHGLSCEVCKFKAHKRCAVRAT FT NNCKWTTLASIGKDIIEDEDGVAMPHQWLEGNLPVSAKCAVCDKTCGSVLRLQDWKCLW FT CKTMVHTACKDLYHPICPLGQCKVSIIPPIALNSTDSDGFCRATFSFCVSPLLVFVNSK FT SGDNQGVKFLRRFKQLLNPAQVFDLMNGGPHLGLRLFQKFDNFRILVCGGDGSVGWVLS FT EIDKLNLNKQCQLGVLPLGTGNDLARVLGWGGSYDDDTQLPQILEKLERASTKMLDRWS FT IMTYELKLPPKASLLPGPPEASEEFYMTIYEDSVATHLTKILNSDEHAVVISSAKTLCE FT TVKDFVAKVEKTYDKTLENAVVADAVASKCSVLNEKLEQLLQALHTDSQAAPVLPGLSP FT LIVEEDAVESSSEESLGESKEQLGDDVTKPSSQKAVKPREIMLRANSLKKAVRQVIEEA FT GKVMDDPTVHPCEPANQSSDYDSTETDESKEEAKDDGAKESITVKTAPRSPDARASYGH FT SQTDSVPGPAVAASKENLPVLNTRIICPGLRAGLAASIAGSSIINKMLLANIDPFGATP FT FIDPDLDSVDGYSEKCVMNNYFGIGLDAKISLEFNNKREEHPEKCRSRTKNLMWYGVLG FT TRELLQRSYKNLEQRVQLECDGQYIPLPSLQGIAVLNIPSYAGGTNFWGGTKEDDIFAA FT PSFDDKILEVVAIFDSMQMAVSRVIKLQHHRIAQCRTVKITIFGDEGVPVQVDGEAWVQ FT PPGIIKIVHKNRAQMLTRDRAFESTLKSWEDKQKCDSGKPVLRTHLYIHHAIDLATEEV FT SQMQLCSQAAEELITRICDAATIHCLLEQELAHAVNACSHALNKANPRCPESLTRDTAT FT EIAINVKALYNETESLLVGRVPLQLESPHEERVSNALHSVEVELQKLTEIPWLYYILHP FT NEDEEPPMDCTKRNNRSTVFRIVPKFKKEKVQKQKTSSQPVQKWGTEEVAAWLDLLNLG FT EYKDIFIRHDIRGAELLHLERRDLKDLGIPKVGHVKRILQGIKELGRSTPQSEV" FT misc_feature 42712323 FT /note="Clone_right_end: RP11-187A9" FT misc_feature 42712327 FT /note="Clone_right_end: RP11-187A9" FT mRNA join(42714531..42714979,42727886..42728051, FT 42729427..42729531,42729803..42729935,42733402..42733508, FT 42734147..42734272,42739467..42739569,42740651..42740810, FT 42742576..42742684,42742815..42742954,42748196..42748280, FT 42752271..42752356,42761185..42761284,42763172..42763445, FT 42764539..42764661,42769021..42769152,42769899..42770095, FT 42772614..42772729,42773702..42773812,42773949..42774045, FT 42780175..42780282,42783095..42783208,42783467..42783601, FT 42784738..42784901,42788643..42788748,42789711..42789803, FT 42793366..42793485,42793822..42793930, FT complement(AL136527.9:139870..140055)) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-002" FT /product="diacylglycerol kinase, eta" FT /note="match: cDNAs: Em:BC044822.1" FT /note="match: ESTs: Em:BG723110.1" FT misc_feature 42725624..42725675 FT /note="Single clone region. Region is contained within FT inverted repeat. Assembly is consistent with restriction FT digest" FT mRNA join(42788643..42788748,42789711..42789803, FT 42790741..42790823) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-003" FT /product="diacylglycerol kinase, eta" FT /note="match: ESTs: Em:BG181682.1 Em:BG195198.1 FT Em:BG208638.1" FT misc_feature 42796437 FT /note="Clone_left_end: RP11-215B13" FT misc_feature complement(42796538..42943289) FT /note="annotated region of clone" FT misc_feature complement(42922313) FT /note="Clone_left_end: RP11-84N7" FT mRNA join(AL157932.21:40091..40303,AL139328.8:53492..53602, FT AL139328.8:55581..55661,AL139328.8:81320..81424, FT AL139328.8:81696..81828,AL139328.8:85295..85401, FT AL139328.8:86040..86165,AL139328.8:91360..91462, FT AL139328.8:92544..92703,AL139328.8:94469..94577, FT AL139328.8:94708..94847,AL139328.8:100089..100173, FT AL139328.8:104164..104249,AL139328.8:113078..113177, FT AL139328.8:115065..115338,AL139328.8:116432..116554, FT AL139328.8:120914..121045,AL139328.8:124507..124624, FT AL139328.8:125595..125705,AL139328.8:125842..125938, FT AL139328.8:132068..132175,AL139328.8:134988..135101, FT AL139328.8:135360..135494,AL139328.8:136631..136794, FT AL139328.8:140536..140641,AL139328.8:141604..141696, FT AL139328.8:145259..145378,AL139328.8:145715..145823, FT 42803235..42803888) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-001" FT /product="diacylglycerol kinase, eta" FT /note="match: cDNAs: Em:AB078967.1 Em:AK098302.1" FT /note="match: ESTs: Em:AI382581.1 Em:BF366005.1 FT Em:BG285439.1 Em:BU101576.1 Em:BU101813.1 Em:BX955520.1 FT Em:DA112118.1 Em:DB060523.1 Em:DB258176.1 Em:DT932679.1" FT mRNA join(AL157932.21:40091..40303,AL139328.8:53492..53602, FT AL139328.8:55581..55661,AL139328.8:81320..81424, FT AL139328.8:81696..81828,AL139328.8:85295..85401, FT AL139328.8:86040..86165,AL139328.8:91360..91462, FT AL139328.8:92544..92703,AL139328.8:94469..94577, FT AL139328.8:94708..94847,AL139328.8:100089..100173, FT AL139328.8:104164..104249,AL139328.8:113078..113177, FT AL139328.8:115065..115338,AL139328.8:116432..116554, FT AL139328.8:120914..121045,AL139328.8:124507..124624, FT AL139328.8:125595..125705,AL139328.8:125842..125938, FT AL139328.8:132068..132175,AL139328.8:134988..135101, FT AL139328.8:135360..135494,AL139328.8:136631..136794, FT AL139328.8:140536..140641,AL139328.8:141604..141696, FT AL139328.8:145259..145378,AL139328.8:145715..145823, FT AL139328.8:147293..147423,42803235..42803886) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-004" FT /product="diacylglycerol kinase, eta" FT /note="match: cDNAs: Em:AB078968.1 Em:AL833883.1" FT CDS join(AL157932.21:40112..40303,AL139328.8:53492..53602, FT AL139328.8:55581..55661,AL139328.8:81320..81424, FT AL139328.8:81696..81828,AL139328.8:85295..85401, FT AL139328.8:86040..86165,AL139328.8:91360..91462, FT AL139328.8:92544..92703,AL139328.8:94469..94577, FT AL139328.8:94708..94847,AL139328.8:100089..100173, FT AL139328.8:104164..104249,AL139328.8:113078..113177, FT AL139328.8:115065..115338,AL139328.8:116432..116554, FT AL139328.8:120914..121045,AL139328.8:124507..124624, FT AL139328.8:125595..125705,AL139328.8:125842..125938, FT AL139328.8:132068..132175,AL139328.8:134988..135101, FT AL139328.8:135360..135494,AL139328.8:136631..136794, FT AL139328.8:140536..140641,AL139328.8:141604..141696, FT AL139328.8:145259..145378,AL139328.8:145715..145823, FT 42803235..42803287) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-001" FT /standard_name="OTTHUMP00000018326" FT /product="diacylglycerol kinase, eta" FT /protein_id="CAH71399.2" FT /translation="MAGAGGQHHPPGAAGGAAAGAGAAVTSAAASAGPGEDSSDSEAEQ FT EGPQKLIRKVSTSGQIRTKTSIKEGQLLKQTSSFQRWKKRYFKLRGRTLYYAKDSKSLI FT FDEVDLSDASVAEASTKNANNSFTIITPFRRLMLCAENRKEMEDWISSLKSVQTREPYE FT VAQFNVEHFSGMHNWYACSHARPTFCNVCRESLSGVTSHGLSCEVCKFKAHKRCAVRAT FT NNCKWTTLASIGKDIIEDEDGVAMPHQWLEGNLPVSAKCAVCDKTCGSVLRLQDWKCLW FT CKTMVHTACKDLYHPICPLGQCKVSIIPPIALNSTDSDGFCRATFSFCVSPLLVFVNSK FT SGDNQGVKFLRRFKQLLNPAQVFDLMNGGPHLGLRLFQKFDNFRILVCGGDGSVGWVLS FT EIDKLNLNKQCQLGVLPLGTGNDLARVLGWGGSYDDDTQLPQILEKLERASTKMLDRWS FT IMTYELKLPPKASLLPGPPEASEEFYMTIYEDSVATHLTKILNSDEHAVVISSAKTLCE FT TVKDFVAKVEKTYDKTLENAVVADAVASKCSVLNEKLEQLLQALHTDSQAAPVLPGLSP FT LIVEEDAVESSSEESLGESKEQLGDDVTKPSSQKAVKPREIMLRANSLKKAVRQVIEEA FT GKVMDDPTVHPCEPANQSSDYDSTETDESKEEAKDDGAKESITVKTAPRSPDARASYGH FT SQTDSVPGPAVAASKENLPVLNTRIICPGLRAGLAASIAGSSIINKMLLANIDPFGATP FT FIDPDLDSVDGYSEKCVMNNYFGIGLDAKISLEFNNKREEHPEKCRSRTKNLMWYGVLG FT TRELLQRSYKNLEQRVQLECDGQYIPLPSLQGIAVLNIPSYAGGTNFWGGTKEDDIFAA FT PSFDDKILEVVAIFDSMQMAVSRVIKLQHHRIAQCRTVKITIFGDEGVPVQVDGEAWVQ FT PPGIIKIVHKNRAQMLTRDRAFESTLKSWEDKQKCDSGKPVLRTHLYIHHAIDLATEEV FT SQMQLCSQAAEELITRICDAATIHCLLEQELAHAVNACSHALNKANPRCPESLTRDTAT FT EIAINVKALYNETESLLVGRVPLQLESPHEERVSNALHSVEVELQKLTEIPWLYYILHP FT NEDEEPPMDCTKRNNRSTVFRIVPKFKKEKVQKQKTSSQPGSGDTESGSCEANSPGN" FT CDS join(AL157932.21:40112..40303,AL139328.8:53492..53602, FT AL139328.8:55581..55661,AL139328.8:81320..81424, FT AL139328.8:81696..81828,AL139328.8:85295..85401, FT AL139328.8:86040..86165,AL139328.8:91360..91462, FT AL139328.8:92544..92703,AL139328.8:94469..94577, FT AL139328.8:94708..94847,AL139328.8:100089..100173, FT AL139328.8:104164..104249,AL139328.8:113078..113177, FT AL139328.8:115065..115338,AL139328.8:116432..116554, FT AL139328.8:120914..121045,AL139328.8:124507..124624, FT AL139328.8:125595..125705,AL139328.8:125842..125938, FT AL139328.8:132068..132175,AL139328.8:134988..135101, FT AL139328.8:135360..135494,AL139328.8:136631..136794, FT AL139328.8:140536..140641,AL139328.8:141604..141696, FT AL139328.8:145259..145378,AL139328.8:145715..145823, FT AL139328.8:147293..147423,42803235..42803324) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-004" FT /standard_name="OTTHUMP00000178584" FT /product="diacylglycerol kinase, eta" FT /note="match: proteins: Sw:Q86XP1.1" FT /protein_id="CAM14245.1" FT /translation="MAGAGGQHHPPGAAGGAAAGAGAAVTSAAASAGPGEDSSDSEAEQ FT EGPQKLIRKVSTSGQIRTKTSIKEGQLLKQTSSFQRWKKRYFKLRGRTLYYAKDSKSLI FT FDEVDLSDASVAEASTKNANNSFTIITPFRRLMLCAENRKEMEDWISSLKSVQTREPYE FT VAQFNVEHFSGMHNWYACSHARPTFCNVCRESLSGVTSHGLSCEVCKFKAHKRCAVRAT FT NNCKWTTLASIGKDIIEDEDGVAMPHQWLEGNLPVSAKCAVCDKTCGSVLRLQDWKCLW FT CKTMVHTACKDLYHPICPLGQCKVSIIPPIALNSTDSDGFCRATFSFCVSPLLVFVNSK FT SGDNQGVKFLRRFKQLLNPAQVFDLMNGGPHLGLRLFQKFDNFRILVCGGDGSVGWVLS FT EIDKLNLNKQCQLGVLPLGTGNDLARVLGWGGSYDDDTQLPQILEKLERASTKMLDRWS FT IMTYELKLPPKASLLPGPPEASEEFYMTIYEDSVATHLTKILNSDEHAVVISSAKTLCE FT TVKDFVAKVEKTYDKTLENAVVADAVASKCSVLNEKLEQLLQALHTDSQAAPVLPGLSP FT LIVEEDAVESSSEESLGESKEQLGDDVTKPSSQKAVKPREIMLRANSLKKAVRQVIEEA FT GKVMDDPTVHPCEPANQSSDYDSTETDESKEEAKDDGAKESITVKTAPRSPDARASYGH FT SQTDSVPGPAVAASKENLPVLNTRIICPGLRAGLAASIAGSSIINKMLLANIDPFGATP FT FIDPDLDSVDGYSEKCVMNNYFGIGLDAKISLEFNNKREEHPEKCRSRTKNLMWYGVLG FT TRELLQRSYKNLEQRVQLECDGQYIPLPSLQGIAVLNIPSYAGGTNFWGGTKEDDIFAA FT PSFDDKILEVVAIFDSMQMAVSRVIKLQHHRIAQCRTVKITIFGDEGVPVQVDGEAWVQ FT PPGIIKIVHKNRAQMLTRDRAFESTLKSWEDKQKCDSGKPVLRTHLYIHHAIDLATEEV FT SQMQLCSQAAEELITRICDAATIHCLLEQELAHAVNACSHALNKANPRCPESLTRDTAT FT EIAINVKALYNETESLLVGRVPLQLESPHEERVSNALHSVEVELQKLTEIPWLYYILHP FT NEDEEPPMDCTKRNNRSTVFRIVPKFKKEKVQKQKTSSQPVQKWGTEEVAAWLDLLNLG FT EYKDIFIRHDIRGAELLHLERRDLKDLGIPKVGHVKRILQGIKELGRSTPQSEV" FT polyA_site 42897403 FT polyA_signal 42897381..42897386 FT mRNA join(AL139328.8:66424..66872,AL139328.8:79779..79944, FT AL139328.8:81320..81424,AL139328.8:81696..81828, FT AL139328.8:85295..85401,AL139328.8:86040..86165, FT AL139328.8:91360..91462,AL139328.8:92544..92703, FT AL139328.8:94469..94577,AL139328.8:94708..94847, FT AL139328.8:100089..100173,AL139328.8:104164..104249, FT AL139328.8:113078..113177,AL139328.8:115065..115338, FT AL139328.8:116432..116554,AL139328.8:120914..121045, FT AL139328.8:121792..121988,AL139328.8:124507..124622, FT AL139328.8:125595..125705,AL139328.8:125842..125938, FT AL139328.8:132068..132175,AL139328.8:134988..135101, FT AL139328.8:135360..135494,AL139328.8:136631..136794, FT AL139328.8:140536..140641,AL139328.8:141604..141696, FT AL139328.8:145259..145378,AL139328.8:145715..145823, FT 42803235..42803420) FT /gene="DGKH" FT /locus_tag="RP11-215B13.1-002" FT /product="diacylglycerol kinase, eta" FT /note="match: cDNAs: Em:BC044822.1" FT /note="match: ESTs: Em:BG723110.1" FT CDS join(42860485..42860535,42866521..42866637, FT 42869831..42869878,42871184..42871318,42872669..42872933, FT 42873499..42877999,42882590..42882745,42887183..42887266, FT 42888030..42888076,42891664..42891824,42893224..42893364) FT /gene="AKAP11" FT /locus_tag="RP11-215B13.5-001" FT /standard_name="OTTHUMP00000018327" FT /product="A kinase (PRKA) anchor protein 11" FT /note="match: proteins: Sw:Q9UKA4.1" FT /protein_id="CAB89419.1" FT /translation="MATFRNNHMKTKASVRKSFSEDVFQSVKSLLQSQKELCSVTAEDC FT LQQDEHANLTEVTFLGFNEETDAAHIQDLAAVSLELPDILNSLHFCSLNENEIICMKNI FT NKPLDISSDPLNQSHPSGMLCVMRVSPTSPRLRIDFIFSLLSKYATGIRYTLDTFLHQK FT HQLETTDEDDDDTNQSVSSIEDDFVTAFEHLEEEETSKPYNDGMNITVLRSQCDAASQT FT VTGHHLETHDLKILISSGQQKSLAKPSTSSVNVLGHKELPSVKTSVTTSISEPWTQRSF FT YRSSNASDKDSDLQKTFFSSSPAYSSESECSSPSPVIFLDEEGYQKSLKAKLELPKIPV FT MKDDIEDSDSEVSEFFDSFDQFDELEQTLETCLFNKDPVIGKSSQRKGHKHGKSCMNPQ FT KFKFDRPALPANVRKPTPRKPESPYGNLCDAPDSPRPVKASREDSGLFSPIRSSAFSPL FT GGCTPAECFCQTDIGGDRIHENHDSVYYTYEDYAKSISCEVLGSVLRTHHTNTLSNINS FT IKHGENKTVTFKHGNLDQKNKSKNKSLMIKDSIQKFAADLVEKSFGSAFKDLQKGVSSC FT TNALYHLAIKLTSSVLQMAFDELRRQRAFSLKERAISGLANFLVSEALSNALKDLQYVK FT KQIFTNTVARFAADLAEELVFEGIMEVCQFSYPQTPASPQCGSFDFEDKVVKLYAKDLS FT ESVIQEAFIELSQVDVTFTTKAAVSVSTDNIKYVSAESVVPSTQAVTFSPSFHNQAIMV FT TKPVQEYKKEYTVQQALFCTSGIVTSIPVPLAGSALLPYHISSTACQAKAHLSSDDSNS FT NGDSAQVHIATKNREEKAACLRNICLPSEHNPGNQNDFKPTNDDIEMQSSSKLPNDPAI FT ISNFSAAVVHTIVNETLESMTSLEVTKMVDERTDYLTKSLKEKTPPFSHCDQAVLQCSE FT ASSNKDMFADRLSKSIIKHSIDKSKSVIPNIDKNAVYKESLPVSGEESQLTPEKSPKFP FT DSQNQLTHCSLSAAKDCVPECKVSMVHGSSLETLPSCPAVTGQKSDLKESAKDQPLKKH FT NLNSTSLEALSFGQENPFPHSHTFSSTALTCVDGLHVEDKQKVRDRNVIPDTPPSTPLV FT PSRASSEWDIKKLTKKLKGELAKEFAPATPPSTPHNSSVGSLSENEQNTIEKEEFMLKL FT MRSLSEEVESSESGELPEVDVKSEHSGKKVQFAEALATHILSLATEMAASHLDNKIIQE FT PKVKNPCLNVQSQRSVSPTFLNPSDENLKTLCNFAGDLAAEVITEAEKIAKVRNCMLFK FT QKKNSCYADGDEDYKVEEKLDIEAVVHPREVDPFILSLPPSSCMSGLMYKYPSCESVTD FT EYAGHLIQILKQEGGNSELIMDQYANRLAYRSVKSGLQEAAKTTKVQCNSRMFPVPSSQ FT VKTNKELLMFSNKEHHQEADKKRQSKRNEGYFCKNQTCERTLDPYRNEVSQLYSFSTSL FT VHSITKDAKEELTASLVGLPKSLTDSCLFEKSGYEEDNECHVTPELPKSLQPSSQNHRF FT YHSTGSLNGYGCGDNVVQAVEQYAKKVVDDTLELTLGSTVFRVSETTKSADRVTYAEKL FT SPLTGQACRYCDLKELHNCTGNSSQHFFRQGSLASSKPASNPKFSSRYQKSRIFHLSVP FT QIHVNLDKKAVLAEKIVAEAIEKAERELSSTSLAADSGIGQEGASFAESLATETMTAAV FT TNVGHAVSSSKEIEDFQSTESVSSQQMNLSIGDDSTGSWSNLSFEDEHQDESSSFHHLS FT ESNGNSSSWSSLGLEGDLYEDNLSFPTSDSDGPDDKDEEHEDEVEGLGQDGKTLLITNI FT DMEPCTVDPQLRIILQWLIASEAEVAELYFHDSANKEFMLLSKQLQEKGWKVGDLLQAV FT LQYYEVMEKASSEERCKSLFDWLLENA" FT mRNA join(42848464..42848496,42850619..42851124) FT /locus_tag="RP11-215B13.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM503487.1" FT mRNA join(42846289..42846364,42860122..42860171, FT 42860436..42860535,42866521..42866637,42869831..42869878, FT 42871184..42871318,42872669..42872933,42873499..42877999, FT 42882590..42882745,42887183..42887266,42888030..42888076, FT 42891664..42891824,42893224..42897396) FT /gene="AKAP11" FT /locus_tag="RP11-215B13.5-001" FT /product="A kinase (PRKA) anchor protein 11" FT /note="match: ESTs: Em:AL561401.3 Em:AL603337.1 FT Em:BE694434.1 Em:BY800444.1 Em:CN395366.1 Em:DA102648.1 FT Em:DA783616.1 Em:DB047261.1 Em:DB068060.1" FT /note="match: cDNAs: Em:AF176555.1" FT misc_feature complement(42843830) FT /note="Clone_right_end: RP11-413N19" FT polyA_site 42830711 FT CDS <42830009..42830711 FT /pseudo FT /locus_tag="RP11-215B13.2-001" FT /product="fumarate hydratase (FH) pseudogene" FT /note="match: proteins: Sw:P07954" FT polyA_signal 42830692..42830697 FT misc_feature complement(42796538) FT /note="Clone_left_end: RP11-215B13" FT misc_feature 42943290..43071071 FT /note="annotated region of clone" FT CDS complement(42943347..42943793) FT /pseudo FT /locus_tag="RP11-413N19.1-001" FT /product="fatty acid binding protein 3, pseudogene 2" FT /note="match: proteins: Sw:O02772 Sw:P07483 Sw:P07483 FT Sw:P11404 Sw:Q99P61 Tr:Q9XSI5" FT misc_feature 43073066 FT /note="Clone_left_end: RP11-86N24" FT misc_feature 43073071 FT /note="Clone_right_end: RP11-413N19" FT misc_feature complement(43075066..43273789) FT /note="annotated region of clone" FT polyA_site 43182148 FT polyA_signal 43182127..43182132 FT CDS join(43155262..43155429,43174888..43174933, FT 43175019..43175117,43180633..43181054) FT /gene="TNFSF11" FT /locus_tag="RP11-86N24.2-002" FT /standard_name="OTTHUMP00000178585" FT /product="tumor necrosis factor (ligand) superfamily, FT member 11" FT /note="match: proteins: Tr:Q54A98.1" FT /protein_id="CAM23721.1" FT /translation="MDPNRISEDGTHCIYRILRLHENADFQDTTLESQDTKLIPDSCRR FT IKQAFQGAVQKELQHIVGSQHIRAEKAMVDGSWLDLAKRSKLEAQPFAHLTINATDIPS FT GSHKVSLSSWYHDRGWAKISNMTFSNGKLIVNQDGFYYLYANICFRHHETSGDLATEYL FT QLMVYVTKTSIKIPSSHTLMKGGSTKYWSGNSEFHFYSINVGGFFKLRSGEEISIEVSN FT PSLLDPDQDATYFGAFKVRDID" FT mRNA join(43148289..43148658,43155262..43155429, FT 43174888..43174933,43175019..43175117,43180633..43182144) FT /gene="TNFSF11" FT /locus_tag="RP11-86N24.2-001" FT /product="tumor necrosis factor (ligand) superfamily, FT member 11" FT /note="match: cDNAs: Em:AB064269.1 Em:AF019047.1 FT Em:AF053712.1 Em:BC074823.2 Em:BC117286.1 Em:BC117288.1" FT CDS join(43148440..43148658,43155262..43155429, FT 43174888..43174933,43175019..43175117,43180633..43181054) FT /gene="TNFSF11" FT /locus_tag="RP11-86N24.2-001" FT /standard_name="OTTHUMP00000018328" FT /product="tumor necrosis factor (ligand) superfamily, FT member 11" FT /note="match: proteins: Sw:O14788.1 Tr:Q5T9Y4.1" FT /protein_id="CAI16926.1" FT /translation="MRRASRDYTKYLRGSEEMGGGPGAPHEGPLHAPPPPAPHQPPAAS FT RSMFVALLGLGLGQVVCSVALFFYFRAQMDPNRISEDGTHCIYRILRLHENADFQDTTL FT ESQDTKLIPDSCRRIKQAFQGAVQKELQHIVGSQHIRAEKAMVDGSWLDLAKRSKLEAQ FT PFAHLTINATDIPSGSHKVSLSSWYHDRGWAKISNMTFSNGKLIVNQDGFYYLYANICF FT RHHETSGDLATEYLQLMVYVTKTSIKIPSSHTLMKGGSTKYWSGNSEFHFYSINVGGFF FT KLRSGEEISIEVSNPSLLDPDQDATYFGAFKVRDID" FT mRNA join(43136872..43137099,43140757..43140898, FT 43145716..43145874,43155262..43155429,43174888..43174933, FT 43175019..43175117,43180633..43181310) FT /gene="TNFSF11" FT /locus_tag="RP11-86N24.2-002" FT /product="tumor necrosis factor (ligand) superfamily, FT member 11" FT /note="match: ESTs: Em:BM564083.1" FT /note="match: cDNAs: Em:AB037599.1 Em:BC040889.1" FT misc_feature complement(43124268) FT /note="Forced join. Assembly confirmed by restriction FT digest" FT misc_feature complement(43091444) FT /note="Clone_right_end: RP11-117I13" FT misc_feature complement(43075066) FT /note="Clone_left_end: RP11-86N24" FT misc_feature 43273790..43355968 FT /note="annotated region of clone" FT misc_feature 43339490 FT /note="Clone_left_end: RP11-366O17" FT mRNA join(43355751..43355800,AL138819.9:2322..2434, FT AL138819.9:5031..5151,AL138819.9:6859..9815) FT /locus_tag="RP11-366O17.1-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AK098238.1 Em:BC093659.1 FT Em:BC112237.1" FT /note="match: ESTs: Em:DB240124.1 Em:DB241403.1" FT misc_feature 43355969..43442122 FT /note="annotated region of clone" FT CDS join(43358204..43358302,43360899..43361019, FT 43362727..43362926) FT /locus_tag="RP11-366O17.1-001" FT /standard_name="OTTHUMP00000178587" FT /product="novel protein" FT /note="match: proteins: Sw:Q8N7L0.1" FT /protein_id="CAM17952.1" FT /translation="MGQNWKRQQKLWNVPQLPFIRVPPSIYDTSLLKALNQGQQRYFYS FT IMRIYNSRPQWEALQTRYIHSLQHQQLLGYITQREALSYALVLRDSTKRASAKVAPQRT FT IPRKTSAMTRRCPSVLPVSVVLPRAQSKRRQVLRN" FT polyA_signal 43363063..43363068 FT polyA_site 43363082 FT polyA_signal 43365664..43365669 FT polyA_site 43365685 FT mRNA join(43385973..43386074,43386339..>43386428) FT /locus_tag="RP11-366O17.2-001" FT /product="novel protein similar to similar to mesoderm FT specific transcript (mouse) homolog MEST" FT /note="match: cDNAs: Em:AK002086 Em:D78611 Em:D87367 FT Em:Y11534" FT /note="match: ESTs: Em:AA649724 Em:AI038020 Em:AI057156 FT Em:AI424616 Em:AU150829 Em:AV172625 Em:AV222449 Em:AV303239 FT Em:AV366848 Em:AV367311 Em:AV685126 Em:AV752334 Em:AW078843 FT Em:BB022609 Em:BB026124 Em:BB102554 Em:BB413091 Em:BB442339 FT Em:BB467578 Em:BB495367" FT misc_feature 43403100 FT /note="Clone_right_end: RP11-117I13" FT mRNA complement(join(43416550..43416687,43416935..43417023)) FT /locus_tag="RP11-366O17.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA206719.1" FT misc_feature 43441923 FT /note="Clone_left_end: RP11-145J3" FT mRNA join(AL137138.13:98341..98390,43358190..43358302, FT 43360899..43361019,43362727..43365683) FT /locus_tag="RP11-366O17.1-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AK098238.1 Em:BC093659.1 FT Em:BC112237.1" FT /note="match: ESTs: Em:DB240124.1 Em:DB241403.1" FT misc_feature 43442123..43529380 FT /note="annotated region of clone" FT polyA_site complement(43460524) FT polyA_signal complement(43460564..43460569) FT mRNA complement(join(43460524..43462638,43469145..43469244, FT 43474446..43474519,43491677..43491760,43500472..43500565, FT 43528084..43528157,AL445217.3:8111..8194, FT AL445217.3:8922..8995,AL445217.3:13950..14033, FT AL445217.3:15468..15526,AL445217.3:36834..37086)) FT /gene="EPSTI1" FT /locus_tag="RP11-145J3.1-001" FT /product="epithelial stromal interaction 1 (breast)" FT /note="match: cDNAs: Em:AF396928.1" FT /note="match: ESTs: Em:BI837056.1 Em:CB051698.1 FT Em:CD701332.1 Em:DA940572.1" FT CDS complement(join(43462630..43462638,43469145..43469244, FT 43474446..43474519,43491677..43491760,43500472..43500565, FT 43528084..43528157,AL445217.3:8111..8194, FT AL445217.3:8922..8995,AL445217.3:13950..14033, FT AL445217.3:15468..15526,AL445217.3:36834..37021)) FT /gene="EPSTI1" FT /locus_tag="RP11-145J3.1-001" FT /standard_name="OTTHUMP00000018331" FT /product="epithelial stromal interaction 1 (breast)" FT /note="match: proteins: Tr:Q96J88.1" FT /protein_id="CAH70578.1" FT /translation="MNTRNRVVNSGLGASPASRPTRDPQDPSGRQGELSPVEDQREGLE FT AAPKGPSRESVVHAGQRRTSAYTLIAPNINRRNEIQRIAEQELANLEKWKEQNRAKPVH FT LVPRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAELQKMKAIQREK FT SNKLEEKKRLQENLRREAFREHQQYKTAEFLSKLNTESPDRSACQSAVCGPQSSTWARS FT WAYRDSLKAEENRKLQKMKDEQHQKSELLELKRQQQEQERAKIHQTEHRRVNNAFLDRL FT QGKSQPGGLEQSGGCWNMNSGNSWGI" FT mRNA complement(join(43462118..43462638,43463347..43463378, FT 43469145..43469244,43474446..43474519,43491677..43491760, FT 43493436..43493468,43500472..43500565,43528084..43528157, FT AL445217.3:8111..8194,AL445217.3:8922..8995, FT AL445217.3:13950..14033,AL445217.3:15468..15526, FT AL445217.3:36834..37086)) FT /gene="EPSTI1" FT /locus_tag="RP11-145J3.1-003" FT /product="epithelial stromal interaction 1 (breast)" FT /note="match: cDNAs: Em:BC023660.2" FT CDS complement(join(43462386..43462638,43463347..43463378, FT 43469145..43469244,43474446..43474519,43491677..43491760, FT 43493436..43493468,43500472..43500565,43528084..43528157, FT AL445217.3:8111..8194,AL445217.3:8922..8995, FT AL445217.3:13950..14033,AL445217.3:15468..15526, FT AL445217.3:36834..37021)) FT /gene="EPSTI1" FT /locus_tag="RP11-145J3.1-003" FT /standard_name="OTTHUMP00000178586" FT /product="epithelial stromal interaction 1 (breast)" FT /note="match: proteins: Tr:Q8IVC7.1" FT /protein_id="CAM13100.1" FT /translation="MNTRNRVVNSGLGASPASRPTRDPQDPSGRQGELSPVEDQREGLE FT AAPKGPSRESVVHAGQRRTSAYTLIAPNINRRNEIQRIAEQELANLEKWKEQNRAKPVH FT LVPRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAELQKMKAIQREK FT SNKLEEKKRLQENLRREAFREHQQYKTAEFLSKLNTESPDRSACQSAVCGPQSSTWKLP FT ILPRDHSWARSWAYRDSLKAEENRKLQKMKDEQHQKSELLELKRQQQEQERAKIHQTEH FT RRVNNAFLDRLQGKSQPGGLEQSGGCWNMNSGNSWGSLLVFSRHLRVYEKILTPIWPSS FT TDLEKPHEMLFLNVILFSLTVFTLISTAHTLDRAVRSDWLLLVLIYACLEELIPELIFN FT LYCQGNATLFF" FT mRNA complement(join(43493440..43493468,43500472..43500560, FT 43528084..43528157,AL445217.3:8111..8194, FT AL445217.3:8922..8995,AL445217.3:13950..14033, FT AL445217.3:15468..15526,AL445217.3:35955..36038, FT AL445217.3:36834..37036)) FT /gene="EPSTI1" FT /locus_tag="RP11-145J3.1-002" FT /product="epithelial stromal interaction 1 (breast)" FT /note="match: ESTs: Em:BI820131.1" FT misc_feature 43507819 FT /note="Clone_right_end: RP11-366O17" FT CDS 43507994..43509028 FT /pseudo FT /locus_tag="RP11-145J3.3-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:O60069 Sw:Q9NPG8 Sw:Q9Y397" FT misc_feature 43529181 FT /note="Clone_left_end: RP11-335G18" FT misc_feature 43529381..43690979 FT /note="annotated region of clone" FT misc_feature 43539741..43540883 FT /note="Sequence from overlapping clone AL137878. Assembly FT confirmed by restriction digest" FT mRNA complement(join(AL137878.11:18502..20616, FT AL137878.11:27123..27222,AL137878.11:32424..32497, FT AL137878.11:49655..49738,AL137878.11:58450..58543, FT AL137878.11:86062..86135,43537391..43537474, FT 43538202..43538275,43543230..43543313,43544748..43544806, FT 43566114..43566366)) FT /gene="EPSTI1" FT /locus_tag="RP11-145J3.1-001" FT /product="epithelial stromal interaction 1 (breast)" FT /note="match: ESTs: Em:BI837056.1 Em:CB051698.1 FT Em:CD701332.1 Em:DA940572.1" FT /note="match: cDNAs: Em:AF396928.1" FT CDS complement(join(AL137878.11:20608..20616, FT AL137878.11:27123..27222,AL137878.11:32424..32497, FT AL137878.11:49655..49738,AL137878.11:58450..58543, FT AL137878.11:86062..86135,43537391..43537474, FT 43538202..43538275,43543230..43543313,43544748..43544806, FT 43566114..43566301)) FT /gene="EPSTI1" FT /locus_tag="RP11-145J3.1-001" FT /standard_name="OTTHUMP00000018331" FT /product="epithelial stromal interaction 1 (breast)" FT /note="match: proteins: Tr:Q96J88.1" FT /protein_id="CAI13478.1" FT /translation="MNTRNRVVNSGLGASPASRPTRDPQDPSGRQGELSPVEDQREGLE FT AAPKGPSRESVVHAGQRRTSAYTLIAPNINRRNEIQRIAEQELANLEKWKEQNRAKPVH FT LVPRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAELQKMKAIQREK FT SNKLEEKKRLQENLRREAFREHQQYKTAEFLSKLNTESPDRSACQSAVCGPQSSTWARS FT WAYRDSLKAEENRKLQKMKDEQHQKSELLELKRQQQEQERAKIHQTEHRRVNNAFLDRL FT QGKSQPGGLEQSGGCWNMNSGNSWGI" FT mRNA complement(join(AL137878.11:20096..20616, FT AL137878.11:21325..21356,AL137878.11:27123..27222, FT AL137878.11:32424..32497,AL137878.11:49655..49738, FT AL137878.11:51414..51446,AL137878.11:58450..58543, FT AL137878.11:86062..86135,43537391..43537474, FT 43538202..43538275,43543230..43543313,43544748..43544806, FT 43566114..43566366)) FT /gene="EPSTI1" FT /locus_tag="RP11-145J3.1-003" FT /product="epithelial stromal interaction 1 (breast)" FT /note="match: cDNAs: Em:BC023660.2" FT CDS complement(join(AL137878.11:20364..20616, FT AL137878.11:21325..21356,AL137878.11:27123..27222, FT AL137878.11:32424..32497,AL137878.11:49655..49738, FT AL137878.11:51414..51446,AL137878.11:58450..58543, FT AL137878.11:86062..86135,43537391..43537474, FT 43538202..43538275,43543230..43543313,43544748..43544806, FT 43566114..43566301)) FT /gene="EPSTI1" FT /locus_tag="RP11-145J3.1-003" FT /standard_name="OTTHUMP00000178586" FT /product="epithelial stromal interaction 1 (breast)" FT /note="match: proteins: Tr:Q8IVC7.1" FT /protein_id="CAM17275.1" FT /translation="MNTRNRVVNSGLGASPASRPTRDPQDPSGRQGELSPVEDQREGLE FT AAPKGPSRESVVHAGQRRTSAYTLIAPNINRRNEIQRIAEQELANLEKWKEQNRAKPVH FT LVPRRLGGSQSETEVRQKQQLQLMQSKYKQKLKREESVRIKKEAEEAELQKMKAIQREK FT SNKLEEKKRLQENLRREAFREHQQYKTAEFLSKLNTESPDRSACQSAVCGPQSSTWKLP FT ILPRDHSWARSWAYRDSLKAEENRKLQKMKDEQHQKSELLELKRQQQEQERAKIHQTEH FT RRVNNAFLDRLQGKSQPGGLEQSGGCWNMNSGNSWGSLLVFSRHLRVYEKILTPIWPSS FT TDLEKPHEMLFLNVILFSLTVFTLISTAHTLDRAVRSDWLLLVLIYACLEELIPELIFN FT LYCQGNATLFF" FT mRNA complement(join(AL137878.11:51418..51446, FT AL137878.11:58450..58538,AL137878.11:86062..86135, FT 43537391..43537474,43538202..43538275,43543230..43543313, FT 43544748..43544806,43565235..43565318,43566114..43566316)) FT /gene="EPSTI1" FT /locus_tag="RP11-145J3.1-002" FT /product="epithelial stromal interaction 1 (breast)" FT /note="match: ESTs: Em:BI820131.1" FT mRNA join(43597339..43597870,43639822..43639873, FT 43643066..43643139,43652748..43653013) FT /gene="DNAJC15" FT /locus_tag="RP11-335G18.1-002" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 15" FT /note="match: ESTs: Em:AW134748.1" FT mRNA join(43597339..43597870,43639822..43639873, FT 43643066..43643139,43652748..43652824,43659904..43659974, FT 43681314..43683045) FT /gene="DNAJC15" FT /locus_tag="RP11-335G18.1-001" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 15" FT /note="match: ESTs: Em:BF978109.1 Em:DA077874.1 FT Em:DN991860.1" FT /note="match: cDNAs: Em:AF126743.1 Em:AY248898.1 FT Em:AY512565.1 Em:BC010910.1" FT CDS join(43597763..43597870,43639822..43639873, FT 43643066..43643139,43652748..43652824,43659904..43659974, FT 43681314..43681384) FT /gene="DNAJC15" FT /locus_tag="RP11-335G18.1-001" FT /standard_name="OTTHUMP00000018329" FT /product="DnaJ (Hsp40) homolog, subfamily C, member 15" FT /note="match: proteins: Sw:Q5RCP4.1" FT /protein_id="CAI13480.1" FT /translation="MAARGVIAPVGESLRYAEYLQPSAKRPDADVDQQRLVRSLIAVGL FT GVAALAFAGRYAFRIWKPLEQVITETAKKISTPSFSSYYKGGFEQKMSRREAGLILGVS FT PSAGKAKIRTAHRRVMILNHPDKGGSPYVAAKINEAKDLLETTTKH" FT misc_feature 43606512 FT /note="Clone_right_end: RP11-145J3" FT misc_feature 43627819 FT /note="Clone_left_end: RP11-460G11" FT polyA_signal 43681527..43681532 FT polyA_site 43681586 FT polyA_signal 43683014..43683019 FT polyA_site 43683045 FT misc_feature 43690879 FT /note="Clone_right_end: RP11-335G18" FT misc_feature 43690980..43785853 FT /note="annotated region of clone" FT mRNA join(43732767..43733141,43733431..43733602) FT /locus_tag="RP11-460G11.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA620760.1 Em:AV711458.1" FT misc_feature 43783853 FT /note="Clone_right_end: RP11-460G11" FT misc_feature 43785854..43796264 FT /note="annotated region of clone" FT polyA_site complement(43787680) FT polyA_signal complement(43787701..43787706) FT misc_feature 43792265 FT /note="Clone_left_end: RP11-147D24" FT mRNA complement(join(43787654..43788257,AL607148.8:3925..4010, FT AL607148.8:16508..16610,AL607148.8:45270..45326, FT AL607148.8:49342..49449,AL607148.8:78218..78402, FT AL138823.14:22408..22525,AL138823.14:26443..26549, FT AL138823.14:44562..44774,AL138823.14:55943..56176, FT AL138823.14:59875..60081,AL138823.14:61303..61476, FT AL138823.14:111940..112077,AL138823.14:112869..113012, FT AL136959.9:9021..9164,AL161714.8:86753..86855, FT AL162713.19:110497..110753)) FT /gene="RP11-301I17.1" FT /locus_tag="RP11-301I17.1-001" FT /product="novel protein" FT /note="match: cDNAs: Em:BC068521.1" FT /note="match: ESTs: Em:BG723475.1 Em:BI835979.1 FT Em:BP208137.1 Em:BP208577.1 Em:CB119978.1 Em:DA597495.1 FT Em:DB024219.1 Em:DB180978.1 Em:DB267017.1" FT CDS complement(join(43788126..43788257,AL607148.8:3925..4010, FT AL607148.8:16508..16610,AL607148.8:45270..45326, FT AL607148.8:49342..49449,AL607148.8:78218..78402, FT AL138823.14:22408..22525,AL138823.14:26443..26549, FT AL138823.14:44562..44774,AL138823.14:55943..56176, FT AL138823.14:59875..60081,AL138823.14:61303..61476, FT AL138823.14:111940..112077,AL138823.14:112869..112938)) FT /gene="RP11-301I17.1" FT /locus_tag="RP11-301I17.1-001" FT /standard_name="OTTHUMP00000018332" FT /product="novel protein" FT /note="match: proteins: Sw:Q8BHR2.1 Sw:Q8TC92.1 Tr:Q2TU81.1 FT Tr:Q9NWE0.1" FT /protein_id="CAH72199.2" FT /translation="MVDAGGVENITQLPQELPQMMAAAADGLGSIAIDTTQLNMSVTDP FT TAWATAMNNLGMVPVGLPGQQLVSDSICVPGFDPSLNMMTGITPINPMIPGLGLVPPPP FT PTEVAVVKEIIHCKSCTLFPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFE FT QCGDITAIRKSKKNFCHIRFAEEFMVDKAIYLSGYRMRLGSSTDKKDSGRLHVDFAQAR FT DDFYEWECKQRMRAREERHRRKLEEDRLRPPSPPAIMHYSEHEAALLAEKLKDDSKFSE FT AITVLLSWIERGEVNRRSANQFYSMVQSANSHVRRLMNEKATHEQEMEEAKENFKNALT FT GILTQFEQIVAVFNASTRQKAWDHFSKAQRKNIDIWRKHSEELRNAQSEQLMGIRREEE FT MEMSDDENCDSPTKKMRVDESALAAQAYALKEENDSLRWQLDAYRNEVELLKQEKEQLF FT RTEENLTKDQQLQFLQQTMQGMQQQLLTIQEELNNKKSELEQAKEEQSHTQALLKVLQE FT QLKGTKELVETNGHSHEDSNEINVLTVALVNQDRENNIEKRSQGLKSEKEALLIGIIST FT FLHVHPFGANIEYLWSYMQQLDSKISANEIEMLLMRLPRMFKQEFTGVGATLEKRWKLC FT AFEGIKTT" FT misc_feature 43796265..43876112 FT /note="annotated region of clone" FT misc_feature 43872113 FT /note="Clone_left_end: RP11-64J21" FT mRNA complement(join(AL627430.4:3801..4404,43798189..43798274, FT 43810772..43810874,43839534..43839590,43843606..43843713, FT 43872482..43872666,AL138823.14:22408..22525, FT AL138823.14:26443..26549,AL138823.14:44562..44774, FT AL138823.14:55943..56176,AL138823.14:59875..60081, FT AL138823.14:61303..61476,AL138823.14:111940..112077, FT AL138823.14:112869..113012,AL136959.9:9021..9164, FT AL161714.8:86753..86855,AL162713.19:110497..110753)) FT /gene="RP11-301I17.1" FT /locus_tag="RP11-301I17.1-001" FT /product="novel protein" FT /note="match: cDNAs: Em:BC068521.1" FT /note="match: ESTs: Em:BG723475.1 Em:BI835979.1 FT Em:BP208137.1 Em:BP208577.1 Em:CB119978.1 Em:DA597495.1 FT Em:DB024219.1 Em:DB180978.1 Em:DB267017.1" FT CDS complement(join(AL627430.4:4273..4404,43798189..43798274, FT 43810772..43810874,43839534..43839590,43843606..43843713, FT 43872482..43872666,AL138823.14:22408..22525, FT AL138823.14:26443..26549,AL138823.14:44562..44774, FT AL138823.14:55943..56176,AL138823.14:59875..60081, FT AL138823.14:61303..61476,AL138823.14:111940..112077, FT AL138823.14:112869..112938)) FT /gene="RP11-301I17.1" FT /locus_tag="RP11-301I17.1-001" FT /standard_name="OTTHUMP00000018332" FT /product="novel protein" FT /note="match: proteins: Sw:Q8BHR2.1 Sw:Q8TC92.1 Tr:Q2TU81.1 FT Tr:Q9NWE0.1" FT /protein_id="CAH70584.2" FT /translation="MVDAGGVENITQLPQELPQMMAAAADGLGSIAIDTTQLNMSVTDP FT TAWATAMNNLGMVPVGLPGQQLVSDSICVPGFDPSLNMMTGITPINPMIPGLGLVPPPP FT PTEVAVVKEIIHCKSCTLFPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFE FT QCGDITAIRKSKKNFCHIRFAEEFMVDKAIYLSGYRMRLGSSTDKKDSGRLHVDFAQAR FT DDFYEWECKQRMRAREERHRRKLEEDRLRPPSPPAIMHYSEHEAALLAEKLKDDSKFSE FT AITVLLSWIERGEVNRRSANQFYSMVQSANSHVRRLMNEKATHEQEMEEAKENFKNALT FT GILTQFEQIVAVFNASTRQKAWDHFSKAQRKNIDIWRKHSEELRNAQSEQLMGIRREEE FT MEMSDDENCDSPTKKMRVDESALAAQAYALKEENDSLRWQLDAYRNEVELLKQEKEQLF FT RTEENLTKDQQLQFLQQTMQGMQQQLLTIQEELNNKKSELEQAKEEQSHTQALLKVLQE FT QLKGTKELVETNGHSHEDSNEINVLTVALVNQDRENNIEKRSQGLKSEKEALLIGIIST FT FLHVHPFGANIEYLWSYMQQLDSKISANEIEMLLMRLPRMFKQEFTGVGATLEKRWKLC FT AFEGIKTT" FT misc_feature 43876113..44049224 FT /note="annotated region of clone" FT misc_feature 43926916 FT /note="Clone_left_end: RP11-160G19" FT misc_feature 43933316..43933334 FT /note="Single clone region. sequence from clone PCR only" FT mRNA complement(join(43933868..43934193,43935415..43935501)) FT /gene="RP11-301I17.1" FT /locus_tag="RP11-301I17.1-002" FT /product="novel protein" FT /note="match: ESTs: Em:AW293051.1" FT CDS 43968661..43968961 FT /pseudo FT /locus_tag="RP11-64J21.2-001" FT /product="ribosomal protein L36 (RPL36) pseudogene" FT /note="match: proteins: Sw:P39032 Sw:P47964 Sw:P49181 FT Sw:P49630 Sw:Q9LRB8 Sw:Q9Y3U8" FT mRNA complement(join(AL627430.4:3801..4404, FT AL607148.8:3925..4010,AL607148.8:16508..16610, FT AL607148.8:45270..45326,AL607148.8:49342..49449, FT AL607148.8:78218..78402,43896520..43896637, FT 43900555..43900661,43918674..43918886,43930055..43930288, FT 43933987..43934193,43935415..43935588,43986052..43986189, FT 43986981..43987124,AL136959.9:9021..9164, FT AL161714.8:86753..86855,AL162713.19:110497..110753)) FT /gene="RP11-301I17.1" FT /locus_tag="RP11-301I17.1-001" FT /product="novel protein" FT /note="match: cDNAs: Em:BC068521.1" FT /note="match: ESTs: Em:BG723475.1 Em:BI835979.1 FT Em:BP208137.1 Em:BP208577.1 Em:CB119978.1 Em:DA597495.1 FT Em:DB024219.1 Em:DB180978.1 Em:DB267017.1" FT CDS complement(join(AL627430.4:4273..4404, FT AL607148.8:3925..4010,AL607148.8:16508..16610, FT AL607148.8:45270..45326,AL607148.8:49342..49449, FT AL607148.8:78218..78402,43896520..43896637, FT 43900555..43900661,43918674..43918886,43930055..43930288, FT 43933987..43934193,43935415..43935588,43986052..43986189, FT 43986981..43987050)) FT /gene="RP11-301I17.1" FT /locus_tag="RP11-301I17.1-001" FT /standard_name="OTTHUMP00000018332" FT /product="novel protein" FT /note="match: proteins: Sw:Q8BHR2.1 Sw:Q8TC92.1 Tr:Q2TU81.1 FT Tr:Q9NWE0.1" FT /protein_id="CAI16283.2" FT /translation="MVDAGGVENITQLPQELPQMMAAAADGLGSIAIDTTQLNMSVTDP FT TAWATAMNNLGMVPVGLPGQQLVSDSICVPGFDPSLNMMTGITPINPMIPGLGLVPPPP FT PTEVAVVKEIIHCKSCTLFPQNPNLPPPSTRERPPGCKTVFVGGLPENATEEIIQEVFE FT QCGDITAIRKSKKNFCHIRFAEEFMVDKAIYLSGYRMRLGSSTDKKDSGRLHVDFAQAR FT DDFYEWECKQRMRAREERHRRKLEEDRLRPPSPPAIMHYSEHEAALLAEKLKDDSKFSE FT AITVLLSWIERGEVNRRSANQFYSMVQSANSHVRRLMNEKATHEQEMEEAKENFKNALT FT GILTQFEQIVAVFNASTRQKAWDHFSKAQRKNIDIWRKHSEELRNAQSEQLMGIRREEE FT MEMSDDENCDSPTKKMRVDESALAAQAYALKEENDSLRWQLDAYRNEVELLKQEKEQLF FT RTEENLTKDQQLQFLQQTMQGMQQQLLTIQEELNNKKSELEQAKEEQSHTQALLKVLQE FT QLKGTKELVETNGHSHEDSNEINVLTVALVNQDRENNIEKRSQGLKSEKEALLIGIIST FT FLHVHPFGANIEYLWSYMQQLDSKISANEIEMLLMRLPRMFKQEFTGVGATLEKRWKLC FT AFEGIKTT" FT mRNA join(44032601..44032654,44033066..44033259) FT /locus_tag="RP11-64J21.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG220793.1" FT misc_feature 44047224 FT /note="Clone_right_end: RP11-64J21" FT misc_feature 44049225..44071968 FT /note="annotated region of clone" FT misc_feature 44071868 FT /note="Clone_right_end: RP11-160G19" FT mRNA complement(join(AL627430.4:3801..4404, FT AL607148.8:3925..4010,AL607148.8:16508..16610, FT AL607148.8:45270..45326,AL607148.8:49342..49449, FT AL607148.8:78218..78402,AL138823.14:22408..22525, FT AL138823.14:26443..26549,AL138823.14:44562..44774, FT AL138823.14:55943..56176,AL138823.14:59875..60081, FT AL138823.14:61303..61476,AL138823.14:111940..112077, FT AL138823.14:112869..113012,44058145..44058288, FT AL161714.8:86753..86855,AL162713.19:110497..110753)) FT /gene="RP11-301I17.1" FT /locus_tag="RP11-301I17.1-001" FT /product="novel protein" FT /note="match: cDNAs: Em:BC068521.1" FT /note="match: ESTs: Em:BG723475.1 Em:BI835979.1 FT Em:BP208137.1 Em:BP208577.1 Em:CB119978.1 Em:DA597495.1 FT Em:DB024219.1 Em:DB180978.1 Em:DB267017.1" FT misc_feature 44071969..44154925 FT /note="annotated region of clone" FT mRNA join(44118054..44120436,44120669..44122192) FT /locus_tag="RP11-191J12.1-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:AB060217.1" FT misc_feature 44133421 FT /note="Clone_left_end: RP11-184E24" FT misc_feature 44154825 FT /note="Clone_right_end: RP11-191J12" FT misc_feature 44154926..44250391 FT /note="annotated region of clone" FT misc_feature 44250192 FT /note="Clone_left_end: RP11-168P13" FT mRNA complement(join(AL627430.4:3801..4404, FT AL607148.8:3925..4010,AL607148.8:16508..16610, FT AL607148.8:45270..45326,AL607148.8:49342..49449, FT AL607148.8:78218..78402,AL138823.14:22408..22525, FT AL138823.14:26443..26549,AL138823.14:44562..44774, FT AL138823.14:55943..56176,AL138823.14:59875..60081, FT AL138823.14:61303..61476,AL138823.14:111940..112077, FT AL138823.14:112869..113012,AL136959.9:9021..9164, FT 44241578..44241680,AL162713.19:110497..110753)) FT /gene="RP11-301I17.1" FT /locus_tag="RP11-301I17.1-001" FT /product="novel protein" FT /note="match: cDNAs: Em:BC068521.1" FT /note="match: ESTs: Em:BG723475.1 Em:BI835979.1 FT Em:BP208137.1 Em:BP208577.1 Em:CB119978.1 Em:DA597495.1 FT Em:DB024219.1 Em:DB180978.1 Em:DB267017.1" FT misc_feature 44250392..44393406 FT /note="annotated region of clone" FT misc_feature 44294816 FT /note="Clone_right_end: RP11-184E24" FT mRNA complement(join(AL627430.4:3801..4404, FT AL607148.8:3925..4010,AL607148.8:16508..16610, FT AL607148.8:45270..45326,AL607148.8:49342..49449, FT AL607148.8:78218..78402,AL138823.14:22408..22525, FT AL138823.14:26443..26549,AL138823.14:44562..44774, FT AL138823.14:55943..56176,AL138823.14:59875..60081, FT AL138823.14:61303..61476,AL138823.14:111940..112077, FT AL138823.14:112869..113012,AL136959.9:9021..9164, FT AL161714.8:86753..86855,44360788..44361044)) FT /gene="RP11-301I17.1" FT /locus_tag="RP11-301I17.1-001" FT /product="novel protein" FT /note="match: cDNAs: Em:BC068521.1" FT /note="match: ESTs: Em:BG723475.1 Em:BI835979.1 FT Em:BP208137.1 Em:BP208577.1 Em:CB119978.1 Em:DA597495.1 FT Em:DB024219.1 Em:DB180978.1 Em:DB267017.1" FT misc_feature 44363780 FT /note="Clone_left_end: RP11-411O10" FT misc_feature 44379652..44379669 FT /note="weak data. Confirmed by restriction digest" FT misc_feature 44393407..44561281 FT /note="annotated region of clone" FT misc_feature 44393407 FT /note="Clone_left_end: RP11-5G9" FT polyA_site complement(44410488) FT polyA_signal complement(44410511..44410516) FT polyA_site complement(44422844) FT polyA_signal complement(44422861..44422866) FT CDS complement(join(44411416..44411565,44432917..44433033, FT 44433808..44434206,44442830..44442939,44443467..44443512)) FT /gene="RP11-5G9.1" FT /locus_tag="RP11-5G9.1-004" FT /standard_name="OTTHUMP00000178592" FT /product="novel protein" FT /note="match: proteins: Sw:Q5T0U0.1" FT /protein_id="CAI16114.1" FT /translation="MSDNKERKSQGFPKEDNQDTSSLADAVEKVAKQQQSQASEIEKNK FT KVLFNLKNELHELEKEIAAISAETKETERQIYQQDSAIENTKLHCDSLETQIKSLHSEN FT VKLKFDIETAQEDFEEHMIKYNAYYAKIKAHKNSLGEVESKWSFMTELHEKRDFVKKLK FT TMKEELMQDLQNPGGNRITQVQEDITNLKDKIITVKESIIEKTCFLEEEKKTHEKLRKE FT IEVQHKRYDAILKRLHCQVNKLQSNRRQWQWNIQQLEKTAAELRKCIGMQE" FT mRNA complement(join(44398045..44398147,44432917..44433033, FT 44433808..44434206,44448978..44449062)) FT /gene="RP11-5G9.1" FT /locus_tag="RP11-5G9.1-002" FT /product="novel protein" FT /note="match: ESTs: Em:BG210897.1" FT mRNA complement(join(44453402..44453429,44453540..44453864)) FT /gene="RP11-5G9.1" FT /locus_tag="RP11-5G9.1-003" FT /product="novel protein" FT /note="match: ESTs: Em:AA779386.1" FT mRNA join(44453694..44453870,44455088..>44455615) FT /gene="RP11-5G9.2" FT /locus_tag="RP11-5G9.2-002" FT /product="novel protein" FT /note="match: ESTs: Em:BX503941.1 Em:DR001026.1" FT mRNA complement(join(44411379..44411565,44432917..44433033, FT 44433808..44434206,44442830..44442939,44443467..44443625, FT 44448978..44449063,44453767..44453826)) FT /gene="RP11-5G9.1" FT /locus_tag="RP11-5G9.1-004" FT /product="novel protein" FT /note="match: ESTs: Em:AW373287.1 Em:DA739121.1" FT mRNA complement(join(44422864..44423318,44428224..44430758, FT 44432917..44433033,44433808..44434206,44442830..44442939, FT 44443467..44443625,44448978..44449063,44453767..44453827)) FT /gene="RP11-5G9.1" FT /locus_tag="RP11-5G9.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:BM857427.1 Em:CN332766.1" FT /note="match: cDNAs: Em:AK056408.1" FT mRNA join(44453969..44454255,44455088..44455683, FT 44456321..44456499,44457907..44458072,44462893..44463118, FT 44464250..44464410,44465585..44466438) FT /gene="RP11-5G9.2" FT /locus_tag="RP11-5G9.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AW298298.1 Em:BQ025592.1 FT Em:CA441523.1" FT /note="match: cDNAs: Em:AK096044.1 Em:BC035749.1" FT CDS 44455122..>44455615 FT /gene="RP11-5G9.2" FT /locus_tag="RP11-5G9.2-002" FT /standard_name="OTTHUMP00000178594" FT /product="novel protein" FT /protein_id="CAM22538.1" FT /translation="MAEAVLIDLFGLKLNSQKNCHQTLLKTLNAVQYHHAAKAKFLCIM FT CCSNISYERDGEQDNCEIETSNGLSALLEEFEIVSCPSMAATLYTIKQKIDEKNLSSIK FT VIVPRHRKTLMKAFIDQLFTDVYNFEFEDLQVTFRGGLFKQSIEINVITAQELRGIQNE FT I" FT CDS join(44455122..44455683,44456321..44456499, FT 44457907..44458072,44462893..44463118,44464250..44464409) FT /gene="RP11-5G9.2" FT /locus_tag="RP11-5G9.2-001" FT /standard_name="OTTHUMP00000178593" FT /product="novel protein" FT /note="match: proteins: Sw:Q8IV20.1" FT /protein_id="CAM22539.1" FT /translation="MAEAVLIDLFGLKLNSQKNCHQTLLKTLNAVQYHHAAKAKFLCIM FT CCSNISYERDGEQDNCEIETSNGLSALLEEFEIVSCPSMAATLYTIKQKIDEKNLSSIK FT VIVPRHRKTLMKAFIDQLFTDVYNFEFEDLQVTFRGGLFKQSIEINVITAQELRGIQNE FT IETFLRSLPALRGKLTIITSSLIPDIFIHGFTTRTGGISYIPTLSSFNLFSSSKRRDPK FT VVVQENLRRLANAAGFNVEKFYRIKTHHSNDIWIMGRKEPDSYDGITTNQRGVTIAALG FT ADCIPIVFADPVKKACGVAHAGWKGTLLGVAMATVNAMIAEYGCSLEDIVVVLGPSVGP FT CCFTLPRESAEAFHNLHPACVQLFDSPNPCIDIRKATRILLEQGGILPQNIQDQNQDLN FT LCTSCHPDKFFSHVRDGLNFGTQIGFISIKE" FT polyA_signal 44468044..44468049 FT polyA_site 44468068 FT misc_feature 44533562 FT /note="Clone_right_end: RP11-411O10" FT CDS 44542560..>44545335 FT /pseudo FT /locus_tag="RP11-5G9.4-001" FT /product="diacylglycerol kinase pseudogene" FT /note="match: proteins: Sw:O08560 Sw:O75912 Sw:Q09103 FT Sw:Q09103 Sw:Q13574 Tr:Q91YS0" FT misc_feature 44551900 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 1100bp by restriction digest data" FT misc_feature 44561281 FT /note="Clone_right_end: RP11-5G9" FT misc_feature 44561282..44666053 FT /note="annotated region of clone" FT mRNA join(44596624..44596804,44600959..44601030, FT 44602442..44604073) FT /locus_tag="RP11-65B7.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK001941" FT /note="match: ESTs: Em:AU136814 Em:BG429765" FT mRNA join(44599455..44601030,44602442..44604073) FT /locus_tag="RP11-65B7.1-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK001938" FT misc_feature 44662763 FT /note="Clone_left_end: RP11-478K15" FT misc_feature 44664053 FT /note="Clone_right_end: RP11-65B7" FT misc_feature 44666054..44835527 FT /note="annotated region of clone" FT mRNA complement(join(44680514..44680593,44681228..44681353, FT 44711239..44711372)) FT /locus_tag="RP11-478K15.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AW779259.1" FT mRNA join(44716682..44716832,44717693..44717873, FT 44720918..44720991,44722074..44722166) FT /locus_tag="RP11-478K15.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA398010.1 Em:AA399284.1 FT Em:AI478648.1 Em:AI962420.1 Em:Z20455.1" FT mRNA join(44717729..44717873,44720918..44720991, FT 44812964..44813010) FT /locus_tag="RP11-478K15.2-002" FT /product="novel transcript" FT /note="match: ESTs: Em:Z20455.1" FT mRNA complement(join(44720606..44720782,44728082..44728181, FT 44732158..44732358)) FT /locus_tag="RP11-478K15.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI476676.1" FT CDS complement(join(44718054..44718058,44734739..44734991)) FT /locus_tag="RP11-478K15.4-001" FT /standard_name="OTTHUMP00000018333" FT /product="novel protein" FT /note="match: proteins: Tr:Q9BVW6" FT /protein_id="CAI14422.2" FT /translation="MEAGERIDASQLPHRVLETRGHAISILFGFWTSFICDTYIVLAWI FT SKIKGSPDVSASSDEPYARIQQSRRQCHAEEDQSQVPEAG" FT mRNA complement(join(44717679..44718058,44734739..44735067, FT 44735281..44735393)) FT /locus_tag="RP11-478K15.4-001" FT /product="novel protein" FT /note="match: ESTs: Em:BE544712.1" FT /note="match: cDNAs: Em:BC000868.1" FT misc_feature 44754769 FT /note="Clone_left_end: RP11-426K7" FT mRNA complement(join(44806061..44806294,44810107..44810195)) FT /locus_tag="RP11-478K15.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA877355.1 Em:AI732833.1 FT Em:AI792267.1" FT misc_feature 44834236 FT /note="Clone_right_end: RP11-478K15" FT misc_feature 44865827..45010562 FT /note="annotated region of clone" FT mRNA complement(join(45007665..45009019,45010180..45010231, FT AL139184.8:178..519)) FT /gene="TSC22D1" FT /locus_tag="RP11-269C23.2-002" FT /product="TSC22 domain family, member 1" FT /note="match: ESTs: Em:BQ181583.1 Em:BQ181771.1" FT /note="match: cDNAs: Em:CR597214.1 Em:CR608707.1" FT CDS complement(join(45008762..45009019,45010180..45010231, FT AL139184.8:178..302)) FT /gene="TSC22D1" FT /locus_tag="RP11-269C23.2-002" FT /standard_name="OTTHUMP00000018338" FT /product="TSC22 domain family, member 1" FT /note="match: proteins: Sw:Q15714.1 Sw:Q27I66.1 Sw:Q3MHL6.1 FT Sw:Q4R4H5.1 Sw:Q5R4H1.1 Tr:Q6IBU1.1" FT /protein_id="CAI12991.1" FT /translation="MKSQWCRPVAMDLGVYQLRHFSISFLSSLLGTENASVRLDNSSSG FT ASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASP FT EQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSGPTA" FT mRNA complement(join(45008845..45009019,45009929..45010233, FT AL139184.8:178..270)) FT /gene="TSC22D1" FT /locus_tag="RP11-269C23.2-003" FT /product="TSC22 domain family, member 1" FT /note="match: ESTs: Em:BM744424.1 Em:BM757138.1" FT misc_feature 44901873..44901979 FT /note="sequence from overlapping clone bA426K7 FT (AL162379).Assembly confirmed by restriction digest" FT misc_feature 44918012..44918334 FT /note="Sequence from overlapping clone bA426K7 FT (AL162379).Assembly confirmed by restriction digest" FT misc_feature 44921089 FT /note="Clone_left_end: RP11-71C5" FT misc_feature 44921094 FT /note="Clone_right_end: RP11-426K7" FT mRNA complement(join(45007655..45009019,45010180..45010231, FT AL356107.21:62522..65370)) FT /gene="TSC22D1" FT /locus_tag="RP11-269C23.2-001" FT /product="TSC22 domain family, member 1" FT /note="match: cDNAs: Em:AK027071.1" FT misc_feature 44928366..44928462 FT /note="Sequence from overlapping clone bA71C5 FT (AL139184).Assembly confirmed by restriction digest" FT mRNA join(44947801..44947893,44948135..44948245, FT 44953777..44953849,44969920..44970219,44971408..44971577) FT /gene="RP11-269C23.1" FT /locus_tag="RP11-269C23.1-003" FT /product="novel protein" FT /note="match: ESTs: Em:BI830900.1" FT mRNA join(44947978..44948245,44953777..44953849, FT 44971408..44971850) FT /gene="RP11-269C23.1" FT /locus_tag="RP11-269C23.1-001" FT /product="novel protein" FT /note="match: ESTs: Em:AI498284.1 Em:BI753896" FT /note="match: cDNAs: Em:BC029067" FT mRNA join(44948018..44948245,44953777..44953849, FT 44964493..44964714,44971408..44971846) FT /gene="RP11-269C23.1" FT /locus_tag="RP11-269C23.1-002" FT /product="novel protein" FT /note="match: ESTs: Em:AL519949.1" FT CDS join(44948162..44948245,44953777..44953849, FT 44971408..44971448) FT /gene="RP11-269C23.1" FT /locus_tag="RP11-269C23.1-001" FT /standard_name="OTTHUMP00000018334" FT /product="novel protein" FT /note="match: proteins: Tr:Q9R2C1" FT /protein_id="CAI12995.1" FT /translation="MVAKQRIRMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALF FT VFVVCGSAIFQIIQSIRMGM" FT polyA_signal 44971827..44971832 FT polyA_site 44971850 FT mRNA complement(join(44974487..44975091,44979750..44980002)) FT /locus_tag="RP11-269C23.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BE795922.1" FT misc_feature 44996961..44997207 FT /note="Sequence from overlapping clone bA71C5 FT (AL139184).Assembly confirmed by restriction digest" FT misc_feature 45005576..45005706 FT /note="Sequence from overlapping clone bA71C5 FT (AL139184).Assembly confirmed by restriction digest" FT polyA_site complement(45007655) FT polyA_site complement(45007663) FT polyA_signal complement(45007668..45007673) FT mRNA complement(join(45008703..45009019,45009130..45009420)) FT /gene="TSC22D1" FT /locus_tag="RP11-269C23.2-004" FT /product="TSC22 domain family, member 1" FT /note="match: ESTs: Em:BG718171.1" FT misc_feature 45010462 FT /note="Clone_right_end: RP11-269C23" FT misc_feature 45010563..45086777 FT /note="annotated region of clone" FT mRNA complement(join(AL138960.16:141939..143293, FT AL138960.16:144454..144505,45010640..45010981)) FT /gene="TSC22D1" FT /locus_tag="RP11-269C23.2-002" FT /product="TSC22 domain family, member 1" FT /note="match: cDNAs: Em:CR597214.1 Em:CR608707.1" FT /note="match: ESTs: Em:BQ181583.1 Em:BQ181771.1" FT CDS complement(join(AL138960.16:143036..143293, FT AL138960.16:144454..144505,45010640..45010764)) FT /gene="TSC22D1" FT /locus_tag="RP11-269C23.2-002" FT /standard_name="OTTHUMP00000018338" FT /product="TSC22 domain family, member 1" FT /note="match: proteins: Sw:Q15714.1 Sw:Q27I66.1 Sw:Q3MHL6.1 FT Sw:Q4R4H5.1 Sw:Q5R4H1.1 Tr:Q6IBU1.1" FT /protein_id="CAI16499.1" FT /translation="MKSQWCRPVAMDLGVYQLRHFSISFLSSLLGTENASVRLDNSSSG FT ASVVAIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASP FT EQLAQFQAQLQTGSPPATTQPQGTTQPPAQPASQGSGPTA" FT mRNA complement(join(AL138960.16:143119..143293, FT AL138960.16:144203..144507,45010640..45010732)) FT /gene="TSC22D1" FT /locus_tag="RP11-269C23.2-003" FT /product="TSC22 domain family, member 1" FT /note="match: ESTs: Em:BM744424.1 Em:BM757138.1" FT mRNA join(45011343..45011428,45025554..45025639, FT 45026772..45026963,45053716..45053768) FT /locus_tag="RP11-71C5.2-002" FT /product="filamin A interacting protein 1-like (FILIP1L) FT pseudogene" FT /note="match: ESTs: Em:EG328734.1 Em:EG328735.1 FT Em:EG328739.1 Em:EG328740.1" FT mRNA 45026737..45026958 FT /locus_tag="RP11-71C5.2-001" FT /product="filamin A interacting protein 1-like (FILIP1L) FT pseudogene" FT misc_feature 45063654 FT /note="Clone_left_end: RP11-484D5" FT misc_feature 45086677 FT /note="Clone_right_end: RP11-71C5" FT misc_feature 45086778..45225276 FT /note="annotated region of clone" FT mRNA complement(join(45112858..45113024,45113903..45114169, FT 45114250..45114332)) FT /locus_tag="RP11-484D5.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA933010.1 Em:AI268747.1 FT Em:AI733273.1" FT mRNA complement(join(AL138960.16:141929..143293, FT AL138960.16:144454..144505,45147299..45150147)) FT /gene="TSC22D1" FT /locus_tag="RP11-269C23.2-001" FT /product="TSC22 domain family, member 1" FT /note="match: cDNAs: Em:AK027071.1" FT misc_feature 45149828..45149924 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT CDS 45168994..45170218 FT /pseudo FT /locus_tag="RP11-484D5.2-001" FT /product="SMARCE1 (SWI/SNF related, matrix associated, FT actin dependent regulator of chromatin, subfamily e, member FT 1 ) pseudogene" FT /note="match: proteins: Tr:O54941 Tr:Q803S1 Tr:Q8QG95 FT Tr:Q9EQN4" FT misc_feature 45221277 FT /note="Clone_left_end: RP11-442J21" FT misc_feature 45225277..45280227 FT /note="annotated region of clone" FT mRNA join(45225948..45226004,45238031..45238171, FT 45275056..45275152) FT /locus_tag="RP11-442J21.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG959100.1" FT misc_feature 45247412 FT /note="Clone_right_end: RP11-484D5" FT misc_feature 45255594..45255628 FT /note="sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 45277122..45277166 FT /note="sequence from unidirectional dGTP big dye terminator FT reads only" FT misc_feature 45278128 FT /note="Clone_left_end: RP11-96M12" FT misc_feature 45280228..45393011 FT /note="annotated region of clone" FT misc_feature 45281344..45281356 FT /note="Sequence from overlapping clone bA442J21 (AL356515). FT Assembly confirmed by restriction digest data" FT misc_feature 45285368..45285440 FT /note="Sequence from overlapping clone bA442J21 (AL356515). FT Assembly confirmed by restriction digest data" FT misc_feature 45288651..45288771 FT /note="Sequence from overlapping clone bA442J21 (AL356515). FT Assembly confirmed by restriction digest data" FT misc_feature 45307586..45307688 FT /note="Seqeunce from overlapping clone bA442J21 (AL356515). FT Assembly confirmed by restriction digest data" FT misc_feature 45345619..45345901 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 45360601..45360612 FT /note="Sequence from overlapping clone bA442J21 (AL356515). FT Assembly confirmed by restriction digest data" FT misc_feature 45382793..45382973 FT /note="Sequence from overlapping clone bA442J21 (AL356515). FT Assembly confirmed by restriction digest data" FT mRNA complement(join(45373639..45375141,45378856..45379166, FT 45383545..45383766)) FT /locus_tag="RP11-96M12.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK056732.1" FT misc_feature 45392812 FT /note="Clone_left_end: RP11-540M5" FT misc_feature 45393012..45552196 FT /note="annotated region of clone" FT mRNA complement(join(45513384..45515457,45517577..45517809, FT 45523857..45523973,45533516..45533709,45539979..45540071, FT AL359706.18:3129..3205,AL359706.18:3829..3891, FT AL359706.18:4661..4759,AL359706.18:6011..6093, FT AL359706.18:12964..13422)) FT /gene="NUFIP1" FT /locus_tag="RP11-540M5.1-001" FT /product="nuclear fragile X mental retardation protein FT interacting protein 1" FT /note="match: cDNAs: Em:AF159548.1 Em:BC001436.1" FT /note="match: ESTs: Em:DA390585.1" FT CDS complement(join(45515341..45515457,45517577..45517809, FT 45523857..45523973,45533516..45533709,45539979..45540071, FT AL359706.18:3129..3205,AL359706.18:3829..3891, FT AL359706.18:4661..4759,AL359706.18:6011..6093, FT AL359706.18:12964..13375)) FT /gene="NUFIP1" FT /locus_tag="RP11-540M5.1-001" FT /standard_name="OTTHUMP00000018342" FT /product="nuclear fragile X mental retardation protein FT interacting protein 1" FT /note="match: proteins: Sw:Q9UHK0.1" FT /protein_id="CAC40689.2" FT /translation="MAEPTSDFETPIGWHASPELTPTLGPLSDTAPPRDSWMFWAMLPP FT PPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAPPPFDAQILPGAQPPFDAQSPLDSQPQ FT PSGQPWNFHASTSWYWRQSSDRFPRHQKSFNPAVKNSYYPRKYDAKFTDFSLPPSRKQK FT KKKRKEPVFHFFCDTCDRGFKNQEKYDKHMSEHTKCPELDCSFTAHEKIVQFHWRNMHA FT PGMKKIKLDTPEEIARWREERRKNYPTLANIERKKKLKLEKEKRGAVLTTTQYGKMKGM FT SRHSQMAKIRSPGKNHKWKNDNSRQRAVTGSGSHLCDLKLEGPPEANADPLGVLINSDS FT ESDKEEKPQHSVIPKEVTPALCSLMSSYGSLSGSESEPEETPIKTEADVLAENQVLDSS FT APKSPSQDVKATVRNFSEAKSENRKKSFEKTNPKRKKDYHNYQTLFEPRTHHPYLLEML FT LAPDIRHERNVILQCVRYIIKKDFFGLDTNSAKSKDV" FT misc_feature 45427026..45427032 FT /note="bA96M12 readraid data only. (EMBL accession FT #AL136966). Area consistant with digest" FT misc_feature 45427033..45427289 FT /note="bA96M12 readraid data only. (EMBL accession FT #AL136966). Area consistant with digest" FT misc_feature 45489919 FT /note="Clone_left_end: RP11-245H20" FT misc_feature 45489924 FT /note="Clone_right_end: RP11-96M12" FT polyA_site complement(45513384) FT polyA_signal complement(45513398..45513403) FT misc_feature 45552096 FT /note="Clone_right_end: RP11-540M5" FT misc_feature 45552197..45611772 FT /note="annotated region of clone" FT mRNA complement(join(AL354816.5:120473..122546, FT AL354816.5:124666..124898,AL354816.5:130946..131062, FT AL354816.5:140605..140798,AL354816.5:147068..147160, FT 45553325..45553401,45554025..45554087,45554857..45554955, FT 45556207..45556289,45563160..45563618)) FT /gene="NUFIP1" FT /locus_tag="RP11-540M5.1-001" FT /product="nuclear fragile X mental retardation protein FT interacting protein 1" FT /note="match: ESTs: Em:DA390585.1" FT /note="match: cDNAs: Em:AF159548.1 Em:BC001436.1" FT CDS complement(join(AL354816.5:122430..122546, FT AL354816.5:124666..124898,AL354816.5:130946..131062, FT AL354816.5:140605..140798,AL354816.5:147068..147160, FT 45553325..45553401,45554025..45554087,45554857..45554955, FT 45556207..45556289,45563160..45563571)) FT /gene="NUFIP1" FT /locus_tag="RP11-540M5.1-001" FT /standard_name="OTTHUMP00000018342" FT /product="nuclear fragile X mental retardation protein FT interacting protein 1" FT /note="match: proteins: Sw:Q9UHK0.1" FT /protein_id="CAI12865.1" FT /translation="MAEPTSDFETPIGWHASPELTPTLGPLSDTAPPRDSWMFWAMLPP FT PPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAPPPFDAQILPGAQPPFDAQSPLDSQPQ FT PSGQPWNFHASTSWYWRQSSDRFPRHQKSFNPAVKNSYYPRKYDAKFTDFSLPPSRKQK FT KKKRKEPVFHFFCDTCDRGFKNQEKYDKHMSEHTKCPELDCSFTAHEKIVQFHWRNMHA FT PGMKKIKLDTPEEIARWREERRKNYPTLANIERKKKLKLEKEKRGAVLTTTQYGKMKGM FT SRHSQMAKIRSPGKNHKWKNDNSRQRAVTGSGSHLCDLKLEGPPEANADPLGVLINSDS FT ESDKEEKPQHSVIPKEVTPALCSLMSSYGSLSGSESEPEETPIKTEADVLAENQVLDSS FT APKSPSQDVKATVRNFSEAKSENRKKSFEKTNPKRKKDYHNYQTLFEPRTHHPYLLEML FT LAPDIRHERNVILQCVRYIIKKDFFGLDTNSAKSKDV" FT mRNA join(45563687..45563877,45578440..45578572, FT 45580337..45580438,45582930..45583014,45589087..45589218, FT 45589567..45589731,45594465..45594563,45601920..45602405) FT /gene="RP11-245H20.2" FT /locus_tag="RP11-245H20.2-001" FT /product="novel protein" FT /note="match: cDNAs: Em:BC039586.1" FT mRNA join(45563750..45563877,45575838..45576175) FT /gene="RP11-245H20.2" FT /locus_tag="RP11-245H20.2-004" FT /product="novel protein" FT /note="match: ESTs: Em:BG655061.1" FT mRNA join(45563755..45563877,45578440..45578572, FT 45580337..45580438,45582930..45583014,45589087..45589218, FT 45589567..45589731,45594465..45594563,45601920..45602138, FT 45603374..45606242,45607371..45607737) FT /gene="RP11-245H20.2" FT /locus_tag="RP11-245H20.2-003" FT /product="novel protein" FT /note="match: cDNAs: Em:AB051491.1" FT CDS join(45563790..45563877,45578440..45578572, FT 45580337..45580438,45582930..45583014,45589087..45589218, FT 45589567..45589731,45594465..45594563,45601920..45602138) FT /gene="RP11-245H20.2" FT /locus_tag="RP11-245H20.2-001" FT /standard_name="OTTHUMP00000018339" FT /product="novel protein" FT /note="match: proteins: Sw:Q8IXQ4.1" FT /protein_id="CAI12868.2" FT /translation="MARDLIGPALPPGFKARGTAEDEERDPSPVAGPALPPNYKSSSSD FT SSDSDEDSSSLYEEGNQESEEDDSGPTARKQRKNQDDDDDDDDGFFGPALPPGFKKQDD FT SPPRPIIGPALPPGFIKSTQKSDKGRDDPGQQETDSSEDEDIIGPMPAKGPVNYNVTTE FT FEKRAQRMKEKLTKGDDDSSKPIVRESWMTELPPEMKDFGLGPRTFKRRADDTSGDRSI FT WTDTPADRERKAKETQEARKSSSKKDEEHILSGRDKRLAEQVSSYNESKRSESLMDIHH FT KKLKSKAAEDKNKPQERIPFDRDKDLKVNRFDEAQKKALIKKSRELNTRFSHGKGNMFL FT " FT mRNA join(45579245..45579376,45580337..45580438, FT 45582930..45583014,45589087..45589218,45589567..45589731, FT 45594465..45594563,45601920..45602138,45607371..45607742) FT /gene="RP11-245H20.2" FT /locus_tag="RP11-245H20.2-002" FT /product="novel protein" FT /note="match: cDNAs: Em:AF245045.1" FT CDS join(45589189..45589218,45589567..45589731, FT 45594465..45594563,45601920..45602138) FT /gene="RP11-245H20.2" FT /locus_tag="RP11-245H20.2-002" FT /standard_name="OTTHUMP00000018340" FT /product="novel protein" FT /protein_id="CAI12866.2" FT /translation="MKEKLTKGDDDSSKPIVRESWMTELPPEMKDFGLGPRTFKRRADD FT TSGDRSIWTDTPADRERKAKETQEARKSSSKKDEEHILSGRDKRLAEQVSSYNESKRSE FT SLMDIHHKKLKSKAAEDKNKPQERIPFDRDKDLKVNRFDEAQKKALIKKSRELNTRFSH FT GKGNMFL" FT polyA_signal 45602375..45602380 FT polyA_site 45602405 FT mRNA join(45605339..45606242,45607371..45607746) FT /gene="RP11-245H20.2" FT /locus_tag="RP11-245H20.2-006" FT /product="novel protein" FT /note="match: ESTs: Em:BG254965.1" FT /note="match: cDNAs: Em:AJ420573.1" FT mRNA join(45606422..45606565,45607133..45607745) FT /gene="RP11-245H20.2" FT /locus_tag="RP11-245H20.2-005" FT /product="novel protein" FT /note="match: ESTs: Em:BM980773.1" FT polyA_signal 45607721..45607726 FT polyA_site 45607742 FT misc_feature 45607773 FT /note="Clone_left_end: RP11-321C24" FT misc_feature 45611773..45770354 FT /note="annotated region of clone" FT mRNA join(45620725..45620876,45657173..45657260) FT /locus_tag="RP11-321C24.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA968931" FT misc_feature 45635525 FT /note="Clone_right_end: RP11-245H20" FT misc_feature 45647466..45647768 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA join(45694650..45694856,45710868..45710941, FT 45723905..45723923,45725822..45725966, FT AL138963.20:13205..13286,AL138963.20:58652..58751, FT AL138963.20:73014..73157,AL138963.20:89223..89883) FT /gene="GTF2F2" FT /locus_tag="RP11-290D2.2-001" FT /product="general transcription factor IIF, polypeptide 2, FT 30kDa" FT /note="match: cDNAs: Em:BC001771.1 Em:BT019525.1 FT Em:CR598374.1 Em:X16901.1 Em:X59745.1" FT CDS join(45694791..45694856,45710868..45710941, FT 45723905..45723923,45725822..45725966, FT AL138963.20:13205..13286,AL138963.20:58652..58751, FT AL138963.20:73014..73157,AL138963.20:89223..89342) FT /gene="GTF2F2" FT /locus_tag="RP11-290D2.2-001" FT /standard_name="OTTHUMP00000018348" FT /product="general transcription factor IIF, polypeptide 2, FT 30kDa" FT /note="match: proteins: Sw:P13984.2 Sw:Q01750.1 Sw:Q2T9L9.1 FT Sw:Q8R0A0.1 Tr:Q3UMJ4.1 Tr:Q5W0H3.1 Tr:Q63489.1" FT /protein_id="CAH72459.1" FT /translation="MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRI FT AKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGGQTLTVFTESSSDKL FT SLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNI FT EYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILKEIGV FT QNVKGIHKNTWELKPEYRHYQGEEKSD" FT misc_feature 45766355 FT /note="Clone_left_end: RP11-290D2" FT polyA_site complement(45766988) FT mRNA complement(45766988..45768852) FT /gene="KCTD4" FT /locus_tag="RP11-321C24.3-001" FT /product="potassium channel tetramerisation domain FT containing 4" FT /note="match: cDNAs: Em:BC018063.1" FT polyA_signal complement(45767005..45767010) FT CDS complement(45767923..45768702) FT /gene="KCTD4" FT /locus_tag="RP11-321C24.3-001" FT /standard_name="OTTHUMP00000018343" FT /product="potassium channel tetramerisation domain FT containing 4" FT /note="match: proteins: Sw:Q8WVF5.1 Sw:Q9D7X1.1 FT Tr:Q5W0P9.1" FT /protein_id="CAH72460.1" FT /translation="MERKINRREKEKEYEGKHNSLEDTDQGKNCKSTLMTLNVGGYLYI FT TQKQTLTKYPDTFLEGIVNGKILCPFDADGHYFIDRDGLLFRHVLNFLRNGELLLPEGF FT RENQLLAQEAEFFQLKGLAEEVKSRWEKEQLTPRETTFLEITDNHDRSQGLRIFCNAPD FT FISKIKSRIVLVSKSRLDGFPEEFSISSNIIQFKYFIKSENGTRLVLKEDNTFVCTLET FT LKFEAIMMALKCGFRLLTSLDCSKGSIVHSDALHFIK" FT misc_feature 45770355..45929651 FT /note="annotated region of clone" FT mRNA join(45780490..45781640,45827006..45827105, FT 45841368..45841468) FT /gene="GTF2F2" FT /locus_tag="RP11-290D2.2-002" FT /product="general transcription factor IIF, polypeptide 2, FT 30kDa" FT /note="match: ESTs: Em:BG426557 Em:BG677142 Em:F22073 FT Em:F37649" FT misc_feature 45785695 FT /note="Clone_right_end: RP11-321C24" FT misc_feature 45785701 FT /note="Clone_right_end: RP11-321C24" FT mRNA join(45793488..45793754,45795001..45795044, FT 45827006..45827105,45841368..45841498) FT /gene="GTF2F2" FT /locus_tag="RP11-290D2.2-003" FT /product="general transcription factor IIF, polypeptide 2, FT 30kDa" FT /note="match: ESTs: Em:BF574780" FT misc_feature 45817992..45818132 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 45819439..45819495 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 45844851..45844912 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT mRNA join(AL138693.45:84878..85084,AL138693.45:101096..101169, FT AL138693.45:114133..114151,AL138693.45:116050..116194, FT 45781559..45781640,45827006..45827105,45841368..45841511, FT 45857577..45858237) FT /gene="GTF2F2" FT /locus_tag="RP11-290D2.2-001" FT /product="general transcription factor IIF, polypeptide 2, FT 30kDa" FT /note="match: cDNAs: Em:BC001771.1 Em:BT019525.1 FT Em:CR598374.1 Em:X16901.1 Em:X59745.1" FT CDS join(AL138693.45:85019..85084,AL138693.45:101096..101169, FT AL138693.45:114133..114151,AL138693.45:116050..116194, FT 45781559..45781640,45827006..45827105,45841368..45841511, FT 45857577..45857696) FT /gene="GTF2F2" FT /locus_tag="RP11-290D2.2-001" FT /standard_name="OTTHUMP00000018348" FT /product="general transcription factor IIF, polypeptide 2, FT 30kDa" FT /note="match: proteins: Sw:P13984.2 Sw:Q01750.1 Sw:Q2T9L9.1 FT Sw:Q8R0A0.1 Tr:Q3UMJ4.1 Tr:Q5W0H3.1 Tr:Q63489.1" FT /protein_id="CAH72032.1" FT /translation="MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRI FT AKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGGQTLTVFTESSSDKL FT SLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNI FT EYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILKEIGV FT QNVKGIHKNTWELKPEYRHYQGEEKSD" FT polyA_signal 45858214..45858219 FT polyA_site 45858240 FT polyA_site complement(45911008) FT polyA_signal complement(45911025..45911030) FT mRNA complement(join(45911199..45911523,45912795..45912911, FT 45913632..45913983)) FT /gene="TPT1" FT /locus_tag="RP11-290D2.1-005" FT /product="tumor protein, translationally-controlled 1" FT /note="match: ESTs: Em:AI268409 Em:BE838737 Em:BM842804" FT CDS complement(join(45911521..45911523,45912795..45912911, FT 45913632..45913737,45914129..45914319)) FT /gene="TPT1" FT /locus_tag="RP11-290D2.1-002" FT /standard_name="OTTHUMP00000018345" FT /product="tumor protein, translationally-controlled 1" FT /note="match: proteins: Tr:Q8TBK7 Tr:Q8TBK7.1" FT /protein_id="CAH72033.1" FT /translation="MVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQ FT ETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGE FT NMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC" FT mRNA complement(join(45911437..45911523,45912795..45912911, FT 45913632..45913737,45914129..45914319,45914847..45915293)) FT /gene="TPT1" FT /locus_tag="RP11-290D2.1-003" FT /product="tumor protein, translationally-controlled 1" FT /note="match: ESTs: Em:BI602847 Em:BI602945 Em:BI668898 FT Em:BM009748" FT mRNA complement(join(45911313..45911523,45912795..45912911, FT 45913632..45913737,45914129..45914319,45914847..45914920, FT 45915177..45915318)) FT /gene="TPT1" FT /locus_tag="RP11-290D2.1-001" FT /product="tumor protein, translationally-controlled 1" FT /note="match: cDNAs: Em:AK130847.1 Em:AY117678.1 FT Em:CR607344.1 Em:CR615436.1 Em:CR618209.1 Em:CR619808.1" FT CDS complement(join(45911521..45911523,45912795..45912911, FT 45913632..45913737,45914129..45914319,45914847..45914920, FT 45915177..45915204)) FT /gene="TPT1" FT /locus_tag="RP11-290D2.1-001" FT /standard_name="OTTHUMP00000018344" FT /product="tumor protein, translationally-controlled 1" FT /note="match: proteins: Sw:P13693.1 Sw:P43347.1 Sw:P43348.2 FT Sw:P61288.1 Sw:P63028.1 Sw:P63029.1 Sw:Q5E984.1 FT Tr:Q569M9.1" FT /protein_id="CAH72034.1" FT /translation="MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDD FT SLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLE FT EQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFF FT KDGLEMEKC" FT mRNA complement(join(45911008..45911523,45912795..45912911, FT 45913632..45913737,45914129..45914319,45915177..45915347)) FT /gene="TPT1" FT /locus_tag="RP11-290D2.1-002" FT /product="tumor protein, translationally-controlled 1" FT /note="match: cDNAs: Em:BC022436" FT mRNA complement(join(45911312..45911523,45912795..45914319, FT 45915177..45915290)) FT /gene="TPT1" FT /locus_tag="RP11-290D2.1-006" FT /product="tumor protein, translationally-controlled 1" FT /note="match: ESTs: Em:AA844531 Em:AI092700 Em:AI634739 FT Em:AW469975 Em:BG506436 Em:BG542714 Em:BG622858 FT Em:BI909906" FT mRNA complement(join(45912320..45912911,45913632..45913737, FT 45914129..45914319,45914847..45914920,45915177..45915221)) FT /gene="TPT1" FT /locus_tag="RP11-290D2.1-004" FT /product="tumor protein, translationally-controlled 1" FT /note="match: ESTs: Em:AW673970 Em:BM748731" FT CDS complement(join(45912744..45912911,45913632..45913737, FT 45914129..45914319,45914847..45914920,45915177..45915204)) FT /gene="TPT1" FT /locus_tag="RP11-290D2.1-004" FT /standard_name="OTTHUMP00000018347" FT /product="tumor protein, translationally-controlled 1" FT /note="match: proteins: Tr:Q5W0H4.1" FT /protein_id="CAH72035.1" FT /translation="MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDD FT SLIGGNASAEGPEGEGTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLE FT EQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFF FT KDGLEMEKCVSTRKWVKINNVKKTF" FT mRNA join(45918514..45918581,45918889..45919045) FT /locus_tag="RP11-290D2.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BQ053691" FT mRNA join(45924458..45924681,45925400..45925485) FT /locus_tag="RP11-290D2.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF833012" FT misc_feature 45927651 FT /note="Clone_right_end: RP11-290D2" FT misc_feature 46043378..46216966 FT /note="annotated region of clone" FT misc_feature 46057545..46057568 FT /note="1372 bases of IS186 (X03123) removed here. This FT sequence represents the duplicated flanking sequence of the FT IS186" FT mRNA join(46065604..46065673,46066294..46066385, FT 46067482..46067621,46070287..46070447,46077379..46077484, FT 46083827..46083951,46085900..46086133) FT /gene="COG3" FT /locus_tag="RP11-351K3.3-003" FT /product="component of oligomeric golgi complex 3" FT /note="match: ESTs: Em:AL561885 Em:BF845843 Em:BF845951 FT Em:BF845953 Em:BF846475" FT mRNA join(AL606514.3:35055..35340,46050336..46050482, FT 46053140..46053201,46054260..46054425,46055365..46055439, FT 46056516..46056608,46057365..46057490,46060630..46060710, FT 46065050..46065093,46065547..46065673,46066294..46066385, FT 46067482..46067621,46070287..46070447,46077379..46077484, FT 46083827..46083951,46085900..46085989,46090278..46090398, FT 46092897..46092985,46093095..46093229,46099111..46099186, FT 46103926..46104053,46104817..46104915,46108837..46110765) FT /gene="COG3" FT /locus_tag="RP11-351K3.3-001" FT /product="component of oligomeric golgi complex 3" FT /note="match: ESTs: Em:AW241293.1 Em:BQ573703.1" FT /note="match: cDNAs: Em:AF332595.1 Em:AF349676.1" FT CDS join(AL606514.3:35167..35340,46050336..46050482, FT 46053140..46053201,46054260..46054425,46055365..46055439, FT 46056516..46056608,46057365..46057490,46060630..46060710, FT 46065050..46065093,46065547..46065673,46066294..46066385, FT 46067482..46067621,46070287..46070447,46077379..46077484, FT 46083827..46083951,46085900..46085989,46090278..46090398, FT 46092897..46092985,46093095..46093229,46099111..46099186, FT 46103926..46104053,46104817..46104915,46108837..46108866) FT /gene="COG3" FT /locus_tag="RP11-351K3.3-001" FT /standard_name="OTTHUMP00000018352" FT /product="component of oligomeric golgi complex 3" FT /note="match: proteins: Sw:Q96JB2.2 Tr:Q5XHZ8.1" FT /protein_id="CAH72888.1" FT /translation="MAEAALLLLPEAAAERDAREKLALWDRRPDTTAPLTDRQTDSVLE FT LKAAAENLPVPAELPIEDLCSLTSQSLPIELTSVVPESTEDILLKGFTSLGMEEERIET FT AQQFFSWFAKLQTQMDQDEGTKYRQMRDYLSGFQEQCDAILNDVNSALQHLESLQKQYL FT FVSNKTGTLHEACEQLLKEQSELVDLAENIQQKLSYFNELETINTKLNSPTLSVNSDGF FT IPMLAKLDDCITYISSHPNFKDYPIYLLKFKQCLSKALHLMKTYTVNTLQTLTSQLLKR FT DPSSVPNADNAFTLFYVKFRAAAPKVRTLIEQIELRSEKIPEYQQLLNDIHQCYLDQRE FT LLLGPSIACTVAELTSQNNRDHCALVRSGCAFMVHVCQDEHQLYNEFFTKPTSKLDELL FT EKLCVSLYDVFRPLIIHVIHLETLSELCGILKNEVLEDHVQNNAEQLGAFAAGVKQMLE FT DVQERLVYRTHIYIQTDITGYKPAPGDLAYPDKLVMMEQIAQSLKDEQKKVPSEASFSD FT VHLEEGESNSLTKSGSTESLNPRPQTTISPADLHGMWYPTVRRTLVCLSKLYRCIDRAV FT FQGLSQEALSACIQSLLGASESISKNKTQIDGQLFLIKHLLILREQIAPFHTEFTIKEI FT SLDLKKTRDAAFKILNPMTVPRFFRLNSNNALIEFLLEGTPEIREHYLDSKKDVDRHLK FT SACEQFIQQQTKLFVEQLEEFMTKVSALKTMASQGGPKYTLSQQPWAQPAKVNDLAATA FT YKTIKTKLPVTLRSMSLYLSNKDTEFILFKPVRNNIQQVFQKFHALLKEEFSPEDIQII FT ACPSMEQLSLLLLVSK" FT mRNA join(46090282..46090398,46099111..46099186, FT 46103926..46104053,46104817..46104915,46105286..46105444, FT 46106145..46106228) FT /gene="COG3" FT /locus_tag="RP11-351K3.3-004" FT /product="component of oligomeric golgi complex 3" FT /note="match: ESTs: Em:BM684940 Em:BM931883" FT polyA_signal 46110740..46110745 FT polyA_site 46110760 FT polyA_site 46110765 FT CDS complement(46126998..46127271) FT /pseudo FT /locus_tag="RP11-351K3.4-001" FT /product="translocase of inner mitochondrial membrane 9 FT homolog (yeast) (TIMM9) pseudogene" FT /note="match: proteins: Sw:Q9W762 Sw:Q9WV98 Sw:Q9Y5J7" FT mRNA complement(join(46118895..46119120,46124028..46124180, FT 46124294..46124451,46129565..46129602)) FT /locus_tag="RP11-351K3.2-002" FT /product="novel protein" FT /note="match: ESTs: Em:DR008020.1" FT mRNA complement(join(46115432..46115815,46118895..46119120, FT 46124028..46124180,46124366..46124451,46135504..46135661, FT 46137862..46137923,46142450..46142586,46148977..46149065, FT 46154068..46154109,46154738..46154800,46161198..46161367, FT 46164784..46164832,46170504..46171198)) FT /locus_tag="RP11-351K3.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:AI377871 Em:BM666456" FT /note="match: cDNAs: Em:AK057244" FT CDS complement(join(46115597..46115815,46118895..46119120, FT 46124028..46124180,46124366..46124451,46135504..46135661, FT 46137862..46137923,46142450..46142586,46148977..46149065, FT 46154068..46154109,46154738..46154800,46161198..46161367, FT 46164784..46164832,46170504..46171140)) FT /locus_tag="RP11-351K3.2-001" FT /standard_name="OTTHUMP00000018353" FT /product="novel protein" FT /note="match: proteins: Sw:Q5W0A0.1 Tr:Q96MB5" FT /protein_id="CAH72890.1" FT /translation="MSAENNQLSGASPPHPPTTPQYSTQNLPSEKEDTEVELDEESLQD FT ESPFSPEGESLEDKEYLEEEEDLEEEEYLGKEEYLKEEEYLGKEEHLEEEEYLEKAGYL FT EEEEYIEEEEYLGKEGYLEEEEYLGKEEHLEEEEYLGKEGYLEKEDYIEEVDYLGKKAY FT LEEEEYLGKKSYLEEEKALEKEENLEEEEALEKEENLDGKENLYKKYLKEPKASYSSQT FT MLLRDARSPDAGPSQVTTFLTVPLTFATPSPVSESATESSELLLTLYRRSQASQTDWCY FT DRTAVKSLKSKSETEQETTTKLAPEEHVNTKVQQKKEENVLEFASKENFWDGITDESID FT KLEVEDLDENFLNSSYQTVFKTIIKEMAAHNELEEDFDIPLTKLLESENRWKLVIMLKK FT NYEKFKETILRIKRRREAQKLTEMTSFTFHLMSKPTPEKPETEEIQKPQRVVHHRKKLE FT RDKEWIQKKTVVHQGDGKLILYPNKNVYQILFPDGTGQIHYPSGNLAMLILYAKMKKFT FT YIILEDSLEGRIRALINNSGNATFYDENSDIWLNLSSNLGYYFPKDKRQKAWNWWNLNI FT HVHAPPVQPISLKINEYIQVQIRSQDKIIFCFTYEQKQICLNLGTRYKFVIPEVLSEMK FT KKTILEAEPGPTAQKIRVLLGKMNRLLNYATTPDLENFIEAVSISLMDNKYLKKMLSKL FT WF" FT misc_feature 46214868 FT /note="Clone_left_end: RP11-154C3" FT misc_feature 46216967..46328973 FT /note="annotated region of clone" FT misc_feature 46226249 FT /note="Clone_right_end: RP11-351K3" FT CDS 46245980..46246526 FT /pseudo FT /locus_tag="RP11-154C3.1-001" FT /product="cytochrome c oxidase subunit IV (COX4) FT pseudogene" FT /note="match: proteins: Sw:O46585 Sw:O46586 Sw:P00423 FT Sw:P10888 Sw:P13073 Sw:P19783 Sw:Q91W29 Sw:Q91Y94 Sw:Q96KJ9 FT Sw:Q9TTT8 Tr:P19783" FT polyA_signal 46246634..46246639 FT mRNA complement(join(46255225..46255626,46256437..46256554)) FT /locus_tag="RP11-154C3.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG431110" FT polyA_signal complement(46261329..46261334) FT CDS complement(46261683..46262604) FT /pseudo FT /locus_tag="RP11-154C3.3-001" FT /product="aldo-keto reductase family 1, member B10 (aldose FT reductase) (AKR1B10) pseudogene" FT /note="match: proteins: Sw:O60218 Sw:P02532 Sw:P07943 FT Sw:P15121 Sw:P15122 Sw:P16116 Sw:P38715 Sw:P45376 Sw:P80276 FT Sw:Q01213 Tr:Q5M9J9 Tr:Q9QZI2" FT mRNA join(46276446..46276600,46276910..46276990, FT 46287317..46288693) FT /gene="SPERT" FT /locus_tag="RP11-154C3.4-001" FT /product="spermatid associated" FT /note="match: ESTs: Em:AI611034.1" FT /note="match: cDNAs: Em:AK093129.1 Em:AX747942.1" FT CDS join(46276526..46276600,46276910..46276990, FT 46287317..46288507) FT /gene="SPERT" FT /locus_tag="RP11-154C3.4-001" FT /standard_name="OTTHUMP00000018354" FT /product="spermatid associated" FT /note="match: proteins: Tr:Q8NA61.1 Tr:Q95JK3.1" FT /protein_id="CAH70637.1" FT /translation="MSPLECSECFGDQLLHRTYTWQLTLHSRPNYTRKRDTRSESLEIP FT ISVVLPQRGTAEPFPRLHNLYSTPRCAQQAALPRLSRRMASQHSYPLNRFSSVPLDPME FT RPMSQADLELDYNPPRVQLSDEMFVFQDGRWVNENCRLQSPYFSPSASFHHKLHHKRLA FT KECMLQEENKSLREENKALREENRMLSKENKILQVFWEEHKASLGREESRAPSPLLHKD FT SASLEVVKKDHVALQVPRGKEDSTLQLLREENRALQQLLEQKQAYWAQAEDTAAPAEES FT KPAPSPHEEPCSPGLLQDQGSGLSSRFEEPKGPPARQEDSKELRALRKMVSNMSGPSGE FT EEAKVGPGLPDGCQPLQLLREMRQALQALLKENRLLQEENRTLQVLRAEHRGFQEENKA FT LWENNKLKLQQKLVIDTVTEVTARMEMLIEELYAFMPARSQDPKKPSRV" FT mRNA join(46277263..46277726,46287317..46288694) FT /gene="SPERT" FT /locus_tag="RP11-154C3.4-002" FT /product="spermatid associated" FT /note="match: ESTs: Em:DB046717.1 Em:DB052953.1" FT /note="match: cDNAs: Em:BC027609.2" FT CDS join(46277679..46277726,46287317..46288507) FT /gene="SPERT" FT /locus_tag="RP11-154C3.4-002" FT /standard_name="OTTHUMP00000018355" FT /product="spermatid associated" FT /note="match: proteins: Tr:Q8NHV2.1" FT /protein_id="CAH70638.1" FT /translation="MQPEGLKCRMEESNAERGTAEPFPRLHNLYSTPRCAQQAALPRLS FT RRMASQHSYPLNRFSSVPLDPMERPMSQADLELDYNPPRVQLSDEMFVFQDGRWVNENC FT RLQSPYFSPSASFHHKLHHKRLAKECMLQEENKSLREENKALREENRMLSKENKILQVF FT WEEHKASLGREESRAPSPLLHKDSASLEVVKKDHVALQVPRGKEDSTLQLLREENRALQ FT QLLEQKQAYWAQAEDTAAPAEESKPAPSPHEEPCSPGLLQDQGSGLSSRFEEPKGPPAR FT QEDSKELRALRKMVSNMSGPSGEEEAKVGPGLPDGCQPLQLLREMRQALQALLKENRLL FT QEENRTLQVLRAEHRGFQEENKALWENNKLKLQQKLVIDTVTEVTARMEMLIEELYAFM FT PARSQDPKKPSRV" FT polyA_signal 46288658..46288663 FT polyA_site 46288694 FT misc_feature 46328774 FT /note="Clone_left_end: RP11-480G1" FT misc_feature 46328974..46439784 FT /note="annotated region of clone" FT misc_feature 46389421 FT /note="Clone_right_end: RP11-154C3" FT misc_feature 46400397 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 30bp by restriction digest data" FT mRNA complement(join(46353363..46354701,46356871..46356978, FT 46357623..46358192,46425630..46425757)) FT /locus_tag="RP11-480G1.1-002" FT /product="novel protein similar to seven in absentia 2" FT mRNA complement(join(46354405..46358192,46425630..46425871)) FT /locus_tag="RP11-480G1.1-001" FT /product="novel protein similar to seven in absentia 2" FT /note="match: cDNAs: Em:BC041372.2" FT /note="match: ESTs: Em:BI551601" FT CDS complement(join(46357518..46358192,46425630..46425764)) FT /locus_tag="RP11-480G1.1-001" FT /standard_name="OTTHUMP00000209200" FT /product="novel protein similar to seven in absentia 2" FT /note="match: proteins: Sw:Q8IW03.3" FT /protein_id="CAX15065.1" FT /translation="MLFFTQCFGAVLDLIHLRFQHYKAKRVFSAAGQLVCVVNPTHNLK FT YVSSRRAVTQSAPEQGSFHPHHLSHHHCHHRHHHHLRHHAHPHHLHHQEAGLHANPVTP FT CLCMCPLFSCQWEGRLEVVVPHLRQIHRVDILQGAEIVFLATDMHLPAPADWIIMHSCL FT GHHFLLVLRKQERHEGHPQFFATMMLIGTPTQADCFTYRLELNRNHRRLKWEATPRSVL FT ECVDSVITDGDCLVLNTSLAQLFSDNGSLAIGIAITATEVLPSEAEM" FT misc_feature 46435946..46435968 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 46439585 FT /note="Clone_left_end: RP11-71J12" FT misc_feature 46439785..46587787 FT /note="annotated region of clone" FT CDS complement(join(46531262..46531432,46533618..46533781, FT 46537977..46538177,46539415..46539564,46541639..46542163, FT 46542883..46544106,46544497..46544600,46549418..46549973, FT 46553948..46554139,46559432..46559896,46562922..46563232, FT 46577274..46577471,46584483..46584640,46585550..46585689, FT AL157758.10:6897..7005,AL157758.10:28612..28723, FT AL157758.10:31403..31512,AL157758.10:31839..31955)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-001" FT /standard_name="OTTHUMP00000018356" FT /product="zinc finger CCCH-type containing 13" FT /note="match: proteins: Sw:Q5T200.1" FT /protein_id="CAI16505.1" FT /translation="MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNW FT LKTGNCLYGNTCRFVHGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTEPQKRN FT TEESSSPVRKESSRGRHREKEDIKITKERTPESEEENVEWETNRDDSDNGDINYDYVHE FT LSLEMKRQKIQRELMKLEQENMEKREEIIIKKEVSPEVVRSKLSPSPSLRKSSKSPKRK FT SSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPEDIALGKKYK FT EKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSSSSQSGS FT SIQRHSPSPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRHRSPMREKG FT RHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDR FT RDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHR FT KEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSR FT GSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDNR FT ERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERE FT RERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKERERER FT EERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRN FT PRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQ FT ESRSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESS FT RMRAQDIIGHHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDG FT QVFSPKKGQKKKSIEKKRKKSKGDSDISDEEAAQQSKKKRGPRTPPITTKEELVEMCNG FT KNGILEDSQKKEDTAFSDWSDEDVPDRTEVTEAEHTATATTPGSTPSPLSSLLPPPPPV FT ATATATTVPATLAATTAAAATSFSTSAITISTSATPTNTTNNTFANEDSHRKCHRTRVE FT KVETPHVTIEDAQHRKPMDQKRSSSLGSNRSNRSHTSGRLRSPSNDSAHRSGDDQSGRK FT RVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDR FT QVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRER FT ERERERDKRRDLDRERERLISDSVERDRDRDRDRTFESSQIESVKRCEAKLEGEHERDL FT ESTSRDSLALDKERMDKDLGSVQGFEETNKSERTESLEGDDESKLDDAHSLGSGAGEGY FT EPISDDELDEILAGDAEKREDQQDEEKMPDPLDVIDVDWSGLMPKHPKEPREPGAALLK FT FTPGAVMLRVGISKKLAGSELFAKVKETCQRLLEKPKDADNLFEHELGALNMAALLRKE FT ERASLLSNLGPCCKALCFRRDSAIRKQLVKNEKGTIKQAYTSAPMVDNELLRLSLRLFK FT RKTTCHAPGHEKTEDNKLSQSSIQQELCVS" FT CDS complement(join(46537957..46538177,46539415..46539567, FT 46541639..46542163,46542883..46544106,46544497..46544600, FT 46549418..46549973,46553948..46554139,46559432..46559896, FT 46562922..46563232,46577274..46577471,46584483..46584640, FT 46585550..46585689,AL157758.10:6897..7005, FT AL157758.10:28612..28723,AL157758.10:31403..31512, FT AL157758.10:31839..31955)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-002" FT /standard_name="OTTHUMP00000018357" FT /product="zinc finger CCCH-type containing 13" FT /protein_id="CAI16506.2" FT /translation="MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNW FT LKTGNCLYGNTCRFVHGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTEPQKRN FT TEESSSPVRKESSRGRHREKEDIKITKERTPESEEENVEWETNRDDSDNGDINYDYVHE FT LSLEMKRQKIQRELMKLEQENMEKREEIIIKKEVSPEVVRSKLSPSPSLRKSSKSPKRK FT SSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPEDIALGKKYK FT EKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSSSSQSGS FT SIQRHSPSPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRHRSPMREKG FT RHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDR FT RDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHR FT KEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSR FT GSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDNR FT ERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERE FT RERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKERERER FT EERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRN FT PRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQ FT ESRSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESS FT RMRAQDIIGHHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDG FT QVFSPKKGQKKKSIEKKRKKSKGDSDISDEEAAQQSKKKRGPRTPPITTKEELVEMCNG FT KNGILEDSQKKEDTAFSDWSDEDVPDRTEVTEAEHTATATTPGSTPSPLSSLLPPPPPV FT ATATATTVPATLAATTAAAATSFSTSAITISTSATPTNTTNNTFANEDSHRKCHRTRVE FT KVETPHVTIEDAQHRKPMDQKRSSSLGSNRSNRSHTSGRLRSPSNDSAHRSGDDQSGRK FT RVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDR FT QVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRER FT ERERERDKRRDLDRERERLISDSVERDRDRDRDRTFESSQIESVKRCEAKLEGEHERDL FT ESTSRDSLALDKERMDKDLGSVQGFEETNKSERTESLEAGDDESKLDDAHSLGSGAGEG FT YEPISDDELDEILAGDAEKREDQQDEEKMPDPLDVIDVDWSGLMPKHPKEPREPGAALL FT KFTPGAVMLRVGISKKLAGSELFAKVKETCQRLLEKPKGSFILL" FT mRNA complement(join(46528600..46531432,46533618..46533781, FT 46537977..46538177,46539415..46539564,46541639..46542163, FT 46542883..46544106,46544497..46544600,46549418..46549973, FT 46553948..46554139,46559432..46559896,46562922..46563232, FT 46577274..46577471,46584483..46584640,46585550..46585689, FT AL157758.10:6897..7005,AL157758.10:28612..28723, FT AL157758.10:31403..31512,AL157758.10:31839..31961, FT AL157758.10:38852..39194)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-001" FT /product="zinc finger CCCH-type containing 13" FT /note="match: cDNAs: Em:AB020660.1 Em:AK056422.1" FT /note="match: ESTs: Em:AI640521.1 Em:AI694136.1 FT Em:AW629264.1" FT mRNA complement(join(46536314..46538177,46539415..46539567, FT 46541639..46542163,46542883..46544106,46544497..46544600, FT 46549418..46549973,46553948..46554139,46559432..46559896, FT 46562922..46563232,46577274..46577471,46584483..46584640, FT 46585550..46585689,AL157758.10:6897..7005, FT AL157758.10:28612..28723,AL157758.10:31403..31512, FT AL157758.10:31839..31964,AL157758.10:39146..39207)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-002" FT /product="zinc finger CCCH-type containing 13" FT /note="match: cDNAs: Em:AY283618.1" FT misc_feature 46509106 FT /note="Clone_right_end: RP11-480G1" FT polyA_site complement(46528600) FT polyA_signal complement(46528617..46528622) FT polyA_site complement(46536311) FT polyA_signal complement(46536335..46536340) FT misc_feature 46548262 FT /note="Clone_left_end: RP11-106H11" FT mRNA complement(join(46575298..46575595,46577274..46577471, FT 46584483..46584640,46585550..46585690)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-003" FT /product="zinc finger CCCH-type containing 13" FT /note="match: ESTs: Em:BM464558" FT mRNA complement(join(46584285..46584640,46585550..46585690)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-004" FT /product="zinc finger CCCH-type containing 13" FT /note="match: ESTs: Em:AI768338 Em:AI949103" FT misc_feature 46587687 FT /note="Clone_right_end: RP11-71J12" FT misc_feature 46587788..46645784 FT /note="annotated region of clone" FT CDS complement(join(<46616292..46616410,46619090..46619199, FT 46619526..46619642)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-005" FT /standard_name="OTTHUMP00000018358" FT /product="zinc finger CCCH-type containing 13" FT /protein_id="CAI10902.1" FT /translation="MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNW FT LKTGNCLYGNTCRFVHGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTEPQKRN FT TEESSSPVRVG" FT CDS complement(join(AL445232.5:91578..91748, FT AL445232.5:93934..94097,AL445232.5:98293..98493, FT AL445232.5:99731..99880,AL445232.5:101955..102479, FT AL445232.5:103199..104422,AL445232.5:104813..104916, FT AL445232.5:109734..110289,AL445232.5:114264..114455, FT AL445232.5:119748..120212,AL445232.5:123238..123548, FT AL445232.5:137590..137787,AL445232.5:144799..144956, FT AL445232.5:145866..146005,46594584..46594692, FT 46616299..46616410,46619090..46619199,46619526..46619642)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-001" FT /standard_name="OTTHUMP00000018356" FT /product="zinc finger CCCH-type containing 13" FT /note="match: proteins: Sw:Q5T200.1" FT /protein_id="CAI10903.1" FT /translation="MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNW FT LKTGNCLYGNTCRFVHGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTEPQKRN FT TEESSSPVRKESSRGRHREKEDIKITKERTPESEEENVEWETNRDDSDNGDINYDYVHE FT LSLEMKRQKIQRELMKLEQENMEKREEIIIKKEVSPEVVRSKLSPSPSLRKSSKSPKRK FT SSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPEDIALGKKYK FT EKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSSSSQSGS FT SIQRHSPSPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRHRSPMREKG FT RHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDR FT RDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHR FT KEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSR FT GSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDNR FT ERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERE FT RERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKERERER FT EERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRN FT PRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQ FT ESRSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESS FT RMRAQDIIGHHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDG FT QVFSPKKGQKKKSIEKKRKKSKGDSDISDEEAAQQSKKKRGPRTPPITTKEELVEMCNG FT KNGILEDSQKKEDTAFSDWSDEDVPDRTEVTEAEHTATATTPGSTPSPLSSLLPPPPPV FT ATATATTVPATLAATTAAAATSFSTSAITISTSATPTNTTNNTFANEDSHRKCHRTRVE FT KVETPHVTIEDAQHRKPMDQKRSSSLGSNRSNRSHTSGRLRSPSNDSAHRSGDDQSGRK FT RVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDR FT QVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRER FT ERERERDKRRDLDRERERLISDSVERDRDRDRDRTFESSQIESVKRCEAKLEGEHERDL FT ESTSRDSLALDKERMDKDLGSVQGFEETNKSERTESLEGDDESKLDDAHSLGSGAGEGY FT EPISDDELDEILAGDAEKREDQQDEEKMPDPLDVIDVDWSGLMPKHPKEPREPGAALLK FT FTPGAVMLRVGISKKLAGSELFAKVKETCQRLLEKPKDADNLFEHELGALNMAALLRKE FT ERASLLSNLGPCCKALCFRRDSAIRKQLVKNEKGTIKQAYTSAPMVDNELLRLSLRLFK FT RKTTCHAPGHEKTEDNKLSQSSIQQELCVS" FT CDS complement(join(AL445232.5:98273..98493, FT AL445232.5:99731..99883,AL445232.5:101955..102479, FT AL445232.5:103199..104422,AL445232.5:104813..104916, FT AL445232.5:109734..110289,AL445232.5:114264..114455, FT AL445232.5:119748..120212,AL445232.5:123238..123548, FT AL445232.5:137590..137787,AL445232.5:144799..144956, FT AL445232.5:145866..146005,46594584..46594692, FT 46616299..46616410,46619090..46619199,46619526..46619642)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-002" FT /standard_name="OTTHUMP00000018357" FT /product="zinc finger CCCH-type containing 13" FT /protein_id="CAM13064.1" FT /translation="MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNW FT LKTGNCLYGNTCRFVHGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDTEPQKRN FT TEESSSPVRKESSRGRHREKEDIKITKERTPESEEENVEWETNRDDSDNGDINYDYVHE FT LSLEMKRQKIQRELMKLEQENMEKREEIIIKKEVSPEVVRSKLSPSPSLRKSSKSPKRK FT SSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPEDIALGKKYK FT EKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSSSSQSGS FT SIQRHSPSPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRHRSPMREKG FT RHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRDHRDDREPRDGRDR FT RDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDYRDREGRDTHR FT KEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSR FT GSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDNR FT ERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERE FT RERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKERERER FT EERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRN FT PRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQ FT ESRSLSPSHLTEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESS FT RMRAQDIIGHHQSEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDG FT QVFSPKKGQKKKSIEKKRKKSKGDSDISDEEAAQQSKKKRGPRTPPITTKEELVEMCNG FT KNGILEDSQKKEDTAFSDWSDEDVPDRTEVTEAEHTATATTPGSTPSPLSSLLPPPPPV FT ATATATTVPATLAATTAAAATSFSTSAITISTSATPTNTTNNTFANEDSHRKCHRTRVE FT KVETPHVTIEDAQHRKPMDQKRSSSLGSNRSNRSHTSGRLRSPSNDSAHRSGDDQSGRK FT RVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDR FT QVHSRSGSFDSRDRLQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRER FT ERERERDKRRDLDRERERLISDSVERDRDRDRDRTFESSQIESVKRCEAKLEGEHERDL FT ESTSRDSLALDKERMDKDLGSVQGFEETNKSERTESLEAGDDESKLDDAHSLGSGAGEG FT YEPISDDELDEILAGDAEKREDQQDEEKMPDPLDVIDVDWSGLMPKHPKEPREPGAALL FT KFTPGAVMLRVGISKKLAGSELFAKVKETCQRLLEKPKGSFILL" FT mRNA complement(join(<46616292..46616410,46619090..46619199, FT 46619526..46619651,46626067..46626124,46626539..46626820)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-005" FT /product="zinc finger CCCH-type containing 13" FT /note="match: ESTs: Em:AU184959 Em:BE731814 Em:BE891137 FT Em:BE895589" FT mRNA complement(join(AL445232.5:88916..91748, FT AL445232.5:93934..94097,AL445232.5:98293..98493, FT AL445232.5:99731..99880,AL445232.5:101955..102479, FT AL445232.5:103199..104422,AL445232.5:104813..104916, FT AL445232.5:109734..110289,AL445232.5:114264..114455, FT AL445232.5:119748..120212,AL445232.5:123238..123548, FT AL445232.5:137590..137787,AL445232.5:144799..144956, FT AL445232.5:145866..146005,46594584..46594692, FT 46616299..46616410,46619090..46619199,46619526..46619648, FT 46626539..46626881)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-001" FT /product="zinc finger CCCH-type containing 13" FT /note="match: ESTs: Em:AI640521.1 Em:AI694136.1 FT Em:AW629264.1" FT /note="match: cDNAs: Em:AB020660.1 Em:AK056422.1" FT mRNA complement(join(AL445232.5:96630..98493, FT AL445232.5:99731..99883,AL445232.5:101955..102479, FT AL445232.5:103199..104422,AL445232.5:104813..104916, FT AL445232.5:109734..110289,AL445232.5:114264..114455, FT AL445232.5:119748..120212,AL445232.5:123238..123548, FT AL445232.5:137590..137787,AL445232.5:144799..144956, FT AL445232.5:145866..146005,46594584..46594692, FT 46616299..46616410,46619090..46619199,46619526..46619651, FT 46626833..46626894)) FT /gene="ZC3H13" FT /locus_tag="RP11-71J12.1-002" FT /product="zinc finger CCCH-type containing 13" FT /note="match: cDNAs: Em:AY283618.1" FT polyA_site complement(46627330) FT polyA_signal complement(46627348..46627353) FT misc_feature 46645585 FT /note="Clone_left_end: RP11-139H14" FT mRNA join(AL137141.10:147204..147294,AL137141.10:164410..164485, FT AL137141.10:167887..168011,AL137141.10:169681..169789, FT AL137141.10:173329..173430,AL137141.10:178253..178357, FT complement(46638783..46638876), FT complement(46632314..46632516), FT complement(46629897..46629984), FT complement(46627879..46627933), FT complement(46627331..46627826)) FT /gene="CPB2" FT /locus_tag="RP11-106H11.1-002" FT /product="carboxypeptidase B2 (plasma)" FT /note="match: cDNAs: Em:AB011969.1" FT mRNA join(AL137141.10:147204..147294,AL137141.10:164410..164485, FT AL137141.10:167887..168011,AL137141.10:169681..169789, FT AL137141.10:173329..173430,AL137141.10:178253..178357, FT complement(46641442..46641552), FT complement(46638783..46638876), FT complement(46632314..46632516), FT complement(46629897..46629984), FT complement(46627321..46627933)) FT /gene="CPB2" FT /locus_tag="RP11-106H11.1-001" FT /product="carboxypeptidase B2 (plasma)" FT /note="match: cDNAs: Em:BC007057.1 Em:BT006936.1 FT Em:CR626525.1 Em:M75106.1" FT CDS join(AL137141.10:147221..147294,AL137141.10:164410..164485, FT AL137141.10:167887..168011,AL137141.10:169681..169789, FT AL137141.10:173329..173430,AL137141.10:178253..178357, FT complement(46638783..46638876), FT complement(46632314..46632516), FT complement(46629897..46629984), FT complement(46627879..46627933), FT complement(46627775..46627826)) FT /gene="CPB2" FT /locus_tag="RP11-106H11.1-002" FT /standard_name="OTTHUMP00000018365" FT /product="carboxypeptidase B2 (plasma)" FT /protein_id="CAI10904.1" FT /translation="MKLCSLAVLVPIVLFCEQHVFAFQSGQVLAALPRTSRQVQVLQNL FT TTTYEIVLWQPVTADLIVKKKQVHFFVNASDVDNVKAHLNVSGIPCSVLLADVEDLIQQ FT QISNDTVSPRASASYYEQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKV FT SGKEQAAKNAIWIDCGIHAREWISPAFCLWFIGHNRMWRKNRSFYANNHCIGTDLNRNF FT ASKHWCEEGASSSSCSETYCGLYPESEPEVKAVASFLRRNINQIKAYISMHSYSQHIVF FT PYSYTRSKSKDHEELSLVASEAVRAIEKISKNTRYTHGHGSETLYLAPGGGDDWIYDLG FT IKYSVTSNPPVEKLLPLSLK" FT CDS join(AL137141.10:147221..147294,AL137141.10:164410..164485, FT AL137141.10:167887..168011,AL137141.10:169681..169789, FT AL137141.10:173329..173430,AL137141.10:178253..178357, FT complement(46641442..46641552), FT complement(46638783..46638876), FT complement(46632314..46632516), FT complement(46629897..46629984), FT complement(46627749..46627933)) FT /gene="CPB2" FT /locus_tag="RP11-106H11.1-001" FT /standard_name="OTTHUMP00000018364" FT /product="carboxypeptidase B2 (plasma)" FT /note="match: proteins: Sw:Q2KIG3.1 Sw:Q96IY4.1" FT /protein_id="CAI10905.1" FT /translation="MKLCSLAVLVPIVLFCEQHVFAFQSGQVLAALPRTSRQVQVLQNL FT TTTYEIVLWQPVTADLIVKKKQVHFFVNASDVDNVKAHLNVSGIPCSVLLADVEDLIQQ FT QISNDTVSPRASASYYEQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKV FT SGKEQAAKNAIWIDCGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPV FT VNVDGYDYSWKKNRMWRKNRSFYANNHCIGTDLNRNFASKHWCEEGASSSSCSETYCGL FT YPESEPEVKAVASFLRRNINQIKAYISMHSYSQHIVFPYSYTRSKSKDHEELSLVASEA FT VRAIEKISKNTRYTHGHGSETLYLAPGGGDDWIYDLGIKYSFTIELRDTGTYGFLLPER FT YIKPTCREAFAAVSKIAWHVIRNV" FT misc_feature complement(46645785..46826364) FT /note="annotated region of clone" FT CDS join(46787170..46787254,46801647..46802324, FT 46802800..46802868,46808327..46808484,46820662..46820760, FT 46824490..46824626,complement(AL139801.17:135619..135702), FT complement(AL139801.17:<130670..130878)) FT /gene="LRRC63" FT /locus_tag="RP11-139H14.4-001" FT /standard_name="OTTHUMP00000018363" FT /product="leucine rich repeat containing 63" FT /protein_id="CAI12166.2" FT /translation="MQKPPLLLRRPLPPKFTKLSLHEKKTHTAKTGKIESLHVAFTEDE FT TTSIKMDRTRFPDVLRNQSLTPINIQNIFLDHCVQERVTAISSPQKSTKHVREQIPDTA FT TGSIFFPHCNSASTRIFGKQTNKMESSRKFKTMKDVYTEKRLENILILSSKFSKPKSTP FT GSVIAQKLEKMHPKHQPLPESPGYTYQHISRDLSATVPSPPPMTVSMKPEGQWPEHFKS FT TATLTLRVTEFPGFVSLPTPVLPRKPHRQSVIETLVTENGNIESVPKQIPPRPPEGLTK FT TEKIESEIHVVRGEGFKTVAATRYETITAMTNLAIVNCQVYGRNALNLKGFFILNCPDL FT TPLAFQLIYLNLSFNDLHYFPTEILCLKNLQILKLRNNPIKEIPSEIQQLEFLRIFTIA FT FNLITVLPIGLFSLSYLEELDVSYNELTFIPNEIQKLRSLEKLTVDGNELSFFPHGILK FT LNLTKIQFENNFTHPCFWRDNYLNNPQQLTQIISLFIVQNKLHKFYDK" FT mRNA join(46786083..46786394,46787137..46787254, FT 46801647..46802324,46802800..46802868,46808327..46808484, FT 46820662..46820760,46824490..46824626, FT complement(AL139801.17:135619..135702), FT complement(AL139801.17:<130670..130878)) FT /gene="LRRC63" FT /locus_tag="RP11-139H14.4-001" FT /product="leucine rich repeat containing 63" FT /note="match: cDNAs: Em:BC030276.1" FT mRNA complement(join(<46732991..46733124,46733734..46733821, FT 46756246..46756360,46758044..46758107,46768159..46768240, FT 46777236..46777365,46785867..46786006)) FT /gene="LCP1" FT /locus_tag="RP11-139H14.1-005" FT /product="lymphocyte cytosolic protein 1 (L-plastin)" FT /note="match: ESTs: Em:AA306160 Em:BG771583" FT mRNA complement(join(46700096..46701858,46704949..46705073, FT 46708262..46708385,46716427..46716560,46717425..46717539, FT 46718577..46718655,46721043..46721238,46722487..46722582, FT 46725071..46725213,46726915..46727080,46728940..46729021, FT 46730573..46730705,46732657..46732786,46732961..46733124, FT 46733734..46733821,46756246..46756360,46758044..46758107, FT 46777236..46777365,46785428..46785483)) FT /gene="LCP1" FT /locus_tag="RP11-139H14.1-006" FT /product="lymphocyte cytosolic protein 1 (L-plastin)" FT /note="match: ESTs: Em:BG718462.1" FT /note="match: cDNAs: Em:AK223305.1 Em:BC010271.1" FT mRNA complement(join(46733151..46733821,46756246..46756339)) FT /gene="LCP1" FT /locus_tag="RP11-139H14.1-002" FT /product="lymphocyte cytosolic protein 1 (L-plastin)" FT /note="match: ESTs: Em:AL601737 Em:BM914494" FT misc_feature complement(46748967) FT /note="Clone_left_end: RP11-106H11" FT mRNA complement(join(<46726916..46727080,46728940..46729021, FT 46730573..46730705,46732657..46732786,46732961..46733124, FT 46733734..46733821,46742598..46742654)) FT /gene="LCP1" FT /locus_tag="RP11-139H14.1-001" FT /product="lymphocyte cytosolic protein 1 (L-plastin)" FT /note="match: ESTs: Em:AU135940 Em:BM465025" FT CDS complement(join(<46732991..46733124,46733734..46733797)) FT /gene="LCP1" FT /locus_tag="RP11-139H14.1-005" FT /standard_name="OTTHUMP00000018360" FT /product="lymphocyte cytosolic protein 1 (L-plastin)" FT /protein_id="CAI12167.1" FT /translation="MARGSVSDEEMMELREAFAKVDTDGNGYISFNELNDLFKAACLPL FT PGYRVREITENLMATGDLDQD" FT CDS complement(join(<46726916..46727080,46728940..46729021, FT 46730573..46730705,46732657..46732786,46732961..46733124, FT 46733734..46733797)) FT /gene="LCP1" FT /locus_tag="RP11-139H14.1-001" FT /standard_name="OTTHUMP00000018359" FT /product="lymphocyte cytosolic protein 1 (L-plastin)" FT /protein_id="CAI12169.1" FT /translation="MARGSVSDEEMMELREAFAKVDTDGNGYISFNELNDLFKAACLPL FT PGYRVREITENLMATGDLDQDGRISFDEFIKIFHGLKSTDVAKTFRKAINKKEGICAIG FT GTSEQSSVGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTNDLFNAVGDGIVL FT CKMINLSVPDTIDERTINKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPY FT LVLGLLWQVIKIGLFADIELSRNE" FT CDS complement(join(46701726..46701858,46704949..46705073, FT 46708262..46708385,46716427..46716560,46717425..46717539, FT 46718577..46718655,46721043..46721238,46722487..46722582, FT 46725071..46725213,46726915..46727080,46728940..46729021, FT 46730573..46730705,46732657..46732786,46732961..46733124, FT 46733734..46733797)) FT /gene="LCP1" FT /locus_tag="RP11-139H14.1-006" FT /standard_name="OTTHUMP00000018362" FT /product="lymphocyte cytosolic protein 1 (L-plastin)" FT /note="match: proteins: Tr:Q3TJX0.1 Tr:Q3U6Z1.1 Tr:Q3U9M7.1 FT Tr:Q3ZC00.1 Tr:Q5XI38.1 Tr:Q9NTI9.1" FT /protein_id="CAI12168.2" FT /translation="MARGSVSDEEMMELREAFAKVDTDGNGYISFNELNDLFKAACLPL FT PGYRVREITENLMATGDLDQDGRISFDEFIKIFHGLKSTDVAKTFRKAINKKEGICAIG FT GTSEQSSVGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTNDLFNAVGDGIVL FT CKMINLSVPDTIDERTINKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPY FT LVLGLLWQVIKIGLFADIELSRNEALIALLREGESLEDLMKLSPEELLLRWANYHLENA FT GCNKIGNFSTDIKDSKAYYHLLEQVAPKGDEEGVPAVVIDMSGLREKDDIQRAECMLQQ FT AERLGCRQFVTATDVVRGNPKLNLAFIANLFNRYPALHKPENQDIDWGALEGETREERT FT FRNWMNSLGVNPRVNHLYSDLSDALVIFQLYEKIKVPVDWNRVNKPPYPKLGGNMKKLE FT NCNYAVELGKNQAKFSLVGIGGQDLNEGNRTLTLALIWQLMRRYTLNILEEIGGGQKVN FT DDIIVNWVNETLREAKKSSSISSFKDPKISTSLPVLDLIDAIQPGSINYDLLKTENLND FT DEKLNNAKYAISMARKIGARVYALPEDLVEVNPKMVMTVFACLMGKGMKRV" FT mRNA complement(join(46721041..46721238,46722487..46722582, FT 46725071..46725213,46726915..46727080,46727274..46727400)) FT /gene="LCP1" FT /locus_tag="RP11-139H14.1-003" FT /product="lymphocyte cytosolic protein 1 (L-plastin)" FT /note="match: ESTs: Em:BG720579" FT mRNA complement(join(46722487..46722582,46722917..46722943, FT 46725071..46725213,46726915..46727080,46727274..46727378)) FT /gene="LCP1" FT /locus_tag="RP11-139H14.1-004" FT /product="lymphocyte cytosolic protein 1 (L-plastin)" FT /note="match: ESTs: Em:AL043695" FT polyA_signal complement(46700110..46700115) FT polyA_signal complement(46700070..46700075) FT polyA_site complement(46700058) FT mRNA complement(join(AL157758.10:39644..40139, FT AL157758.10:40192..40246,AL157758.10:42210..42297, FT AL157758.10:44627..44829,AL157758.10:51096..51189, FT 46648008..46648112,46652935..46653036,46656576..46656684, FT 46658354..46658478,46661880..46661955,46679071..46679161)) FT /gene="CPB2" FT /locus_tag="RP11-106H11.1-002" FT /product="carboxypeptidase B2 (plasma)" FT /note="match: cDNAs: Em:AB011969.1" FT mRNA complement(join(AL157758.10:39634..40246, FT AL157758.10:42210..42297,AL157758.10:44627..44829, FT AL157758.10:51096..51189,AL157758.10:53755..53865, FT 46648008..46648112,46652935..46653036,46656576..46656684, FT 46658354..46658478,46661880..46661955,46679071..46679161)) FT /gene="CPB2" FT /locus_tag="RP11-106H11.1-001" FT /product="carboxypeptidase B2 (plasma)" FT /note="match: cDNAs: Em:BC007057.1 Em:BT006936.1 FT Em:CR626525.1 Em:M75106.1" FT CDS complement(join(AL157758.10:40088..40139, FT AL157758.10:40192..40246,AL157758.10:42210..42297, FT AL157758.10:44627..44829,AL157758.10:51096..51189, FT 46648008..46648112,46652935..46653036,46656576..46656684, FT 46658354..46658478,46661880..46661955,46679071..46679144)) FT /gene="CPB2" FT /locus_tag="RP11-106H11.1-002" FT /standard_name="OTTHUMP00000018365" FT /product="carboxypeptidase B2 (plasma)" FT /protein_id="CAI12170.1" FT /translation="MKLCSLAVLVPIVLFCEQHVFAFQSGQVLAALPRTSRQVQVLQNL FT TTTYEIVLWQPVTADLIVKKKQVHFFVNASDVDNVKAHLNVSGIPCSVLLADVEDLIQQ FT QISNDTVSPRASASYYEQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKV FT SGKEQAAKNAIWIDCGIHAREWISPAFCLWFIGHNRMWRKNRSFYANNHCIGTDLNRNF FT ASKHWCEEGASSSSCSETYCGLYPESEPEVKAVASFLRRNINQIKAYISMHSYSQHIVF FT PYSYTRSKSKDHEELSLVASEAVRAIEKISKNTRYTHGHGSETLYLAPGGGDDWIYDLG FT IKYSVTSNPPVEKLLPLSLK" FT CDS complement(join(AL157758.10:40062..40246, FT AL157758.10:42210..42297,AL157758.10:44627..44829, FT AL157758.10:51096..51189,AL157758.10:53755..53865, FT 46648008..46648112,46652935..46653036,46656576..46656684, FT 46658354..46658478,46661880..46661955,46679071..46679144)) FT /gene="CPB2" FT /locus_tag="RP11-106H11.1-001" FT /standard_name="OTTHUMP00000018364" FT /product="carboxypeptidase B2 (plasma)" FT /note="match: proteins: Sw:Q2KIG3.1 Sw:Q96IY4.1" FT /protein_id="CAI12171.1" FT /translation="MKLCSLAVLVPIVLFCEQHVFAFQSGQVLAALPRTSRQVQVLQNL FT TTTYEIVLWQPVTADLIVKKKQVHFFVNASDVDNVKAHLNVSGIPCSVLLADVEDLIQQ FT QISNDTVSPRASASYYEQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKV FT SGKEQAAKNAIWIDCGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPV FT VNVDGYDYSWKKNRMWRKNRSFYANNHCIGTDLNRNFASKHWCEEGASSSSCSETYCGL FT YPESEPEVKAVASFLRRNINQIKAYISMHSYSQHIVFPYSYTRSKSKDHEELSLVASEA FT VRAIEKISKNTRYTHGHGSETLYLAPGGGDDWIYDLGIKYSFTIELRDTGTYGFLLPER FT YIKPTCREAFAAVSKIAWHVIRNV" FT mRNA join(46669028..46669138,46672533..46672916, FT 46687319..46687467) FT /locus_tag="RP11-139H14.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI860490" FT misc_feature complement(46645785) FT /note="Clone_left_end: RP11-139H14" FT misc_feature complement(46826365..46971745) FT /note="annotated region of clone" FT mRNA complement(join(46917099..46917632,46918876..46918966, FT 46919582..46919735,46923421..46923482,46924248..46924486, FT 46930567..46930631,46933621..46933766,46935576..46935708, FT 46936673..46936733,46937250..46937348,46942177..46942384, FT 46942868..46942950,46946076..46946732,46961812..46962014, FT 46963920..46964177)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-005" FT /product="chromosome 13 open reading frame 18" FT /note="match: cDNAs: Em:AK093073.1 Em:AX747903.1" FT /note="match: ESTs: Em:AI871730.1 Em:AW328103.1 FT Em:BQ447699.1 Em:DB023436.1 Em:DB029577.1 Em:DB050136.1" FT mRNA complement(join(46917099..46917632,46918876..46918966, FT 46923421..46923482,46924248..46924486,46930567..46930631, FT 46933621..46933766,46935576..46935708,46936673..46936733, FT 46937250..46937348,46942177..46942384,46942868..46942950, FT 46946076..46946732,46961269..46961621)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-001" FT /product="chromosome 13 open reading frame 18" FT /note="match: cDNAs: Em:AK025215.1" FT /note="match: ESTs: Em:BI460391.1 Em:DB132640.1 FT Em:DB138082.1" FT mRNA complement(join(46917099..46917632,46918876..46918966, FT 46919582..46919735,46923421..46923482,46924248..46924486, FT 46930567..46930631,46933621..46933766,46935576..46935708, FT 46936673..46936733,46937250..46937348,46942173..46942384, FT 46942868..46942950,46946076..46946732,46952025..46952140, FT 46961269..46961370)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-003" FT /product="chromosome 13 open reading frame 18" FT /note="match: cDNAs: Em:CR590165.1" FT mRNA complement(join(46917099..46917632,46918876..46918966, FT 46919582..46919735,46923421..46923482,46924248..46924486, FT 46930567..46930631,46933621..46933766,46935576..46935708, FT 46936673..46936733,46937250..46937348,46942177..46942384, FT 46942868..46942950,46946076..46946345,46952025..46952140, FT 46961269..46961368)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-006" FT /product="chromosome 13 open reading frame 18" FT /note="match: cDNAs: Em:BC043488.1" FT /note="match: ESTs: Em:BI770267.1" FT mRNA complement(join(46946188..46946345,46961269..46961367)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-009" FT /product="chromosome 13 open reading frame 18" FT /note="match: ESTs: Em:AW406909" FT mRNA complement(join(<46942209..46942384,46942868..46942950, FT 46946076..46946213,46961269..46961365)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-007" FT /product="chromosome 13 open reading frame 18" FT /note="match: ESTs: Em:BG759716" FT mRNA complement(join(46917099..46917632,46918876..46918966, FT 46919582..46919735,46923421..46923482,46924248..46925151, FT 46929712..46930631,46933621..46933766,46935576..46935708, FT 46937250..46937348,46942177..46942384,46942868..46942950, FT 46946076..46946732,46961269..46961316)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-011" FT /product="chromosome 13 open reading frame 18" FT /note="match: cDNAs: Em:BC032311.1" FT mRNA complement(join(<46946076..46946732,46952025..46952140, FT 46952582..46952780)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-008" FT /product="chromosome 13 open reading frame 18" FT /note="match: ESTs: Em:BI464236.1 Em:DB021847.1 FT Em:DB030978.1 Em:DB051523.1" FT CDS complement(join(46917520..46917632,46918876..46918966, FT 46919582..46919735,46923421..46923482,46924248..46924486, FT 46930567..46930631,46933621..46933766,46935576..46935708, FT 46936673..46936733,46937250..46937344,46942173..46942384, FT 46942868..46942950,46952025..46952088)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-012" FT /standard_name="OTTHUMP00000205782" FT /product="chromosome 13 open reading frame 18" FT /protein_id="CAX15165.1" FT /translation="MVSNHYFLLCVNLPLREIHTPGAVQVSRRTISSNSFSPEVFVLPV FT DVEKENAHFYVADMIISAMEKMKCNILSQQQTESWSKEVSGLLGSDQPDSEMTFDTNIK FT QESGSSTSSYSGYEGNAVLQVSPVTETRTYHDVKEICKCDVDEFVILELGDFNDITETC FT SCSCSSSKSVTYEPDFNSAELLAKELYRVFQKCWILSVVNSQLAGSLSAAGSIVVNEEC FT VRKDFESSMNVVQEIKFKSRIRGTEDWAPPRFQIIFNIHPPLKRDLVVAAQNFFCAGCG FT TPVEPKFVKRLRYCEYLGKYFCDCCHSYAESCIPARILMMWDFKKYYVSNFSKQLLDSI FT WHQPIFNLLSIGQSLYAKAKELDRVKEIQEQLFHIKKLLKTCRFANSALKEFEQVPGHL FT TDELHLFSLEDLVRIKKGLLAPLLKDILKASLAHVAGCELCQGKGFICEFCQNTTVIFP FT FQTATCRRCSACRACFHKQCFQSSECPRCARITARRKLLESVASAAT" FT CDS complement(join(46917520..46917632,46918876..46918966, FT 46919582..46919735,46923421..46923482,46924248..46924486, FT 46930567..46930631,46933621..46933766,46935576..46935708, FT 46936673..46936733,46937250..46937348,46942177..46942384, FT 46942868..46942950,46946076..46946345,46952025..46952088)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-006" FT /standard_name="OTTHUMP00000018368" FT /product="chromosome 13 open reading frame 18" FT /note="match: proteins: Sw:Q9H714-3.2" FT /protein_id="CAH71680.2" FT /translation="MVSNHYFLLCVNLPLREIHTPGPSPSCLGDSLAETTLSEDTTDSV FT GSASPHGSSEKSSSFSLSSTEVHMVRPGYSHRVSLPTSPGILATSPYPETDSAFFEPSH FT LTSAADEGAVQVSRRTISSNSFSPEVFVLPVDVEKENAHFYVADMIISAMEKMKCNILS FT QQQTESWSKEVSGLLGSDQPDSEMTFDTNIKQESGSSTSSYSGYEGCAVLQVSPVTETR FT TYHDVKEICKCDVDEFVILELGDFNDITETCSCSCSSSKSVTYEPDFNSAELLAKELYR FT VFQKCWILSVVNSQLAGSLSAAGSIVVNEECVRKDFESSMNVVQEIKFKSRIRGTEDWA FT PPRFQIIFNIHPPLKRDLVVAAQNFFCAGCGTPVEPKFVKRLRYCEYLGKYFCDCCHSY FT AESCIPARILMMWDFKKYYVSNFSKQLLDSIWHQPIFNLLSIGQSLYAKAKELDRVKEI FT QEQLFHIKKLLKTCRFANSALKEFEQVPGHLTDELHLFSLEDLVRIKKGLLAPLLKDIL FT KASLAHVAGCELCQGKGFICEFCQNTTVIFPFQTATCRRCSACRACFHKQCFQSSECPR FT CARITARRKLLESVASAAT" FT mRNA complement(join(46917099..46917632,46918876..46918966, FT 46919582..46919735,46923421..46923482,46924248..46924284, FT 46946203..46946688)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-002" FT /product="chromosome 13 open reading frame 18" FT /note="match: cDNAs: Em:BC021097.1" FT CDS complement(<46946076..46946610) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-008" FT /standard_name="OTTHUMP00000198243" FT /product="chromosome 13 open reading frame 18" FT /protein_id="CAP19141.1" FT /translation="MVSQSTVRQDSPVEPWEGISDHSGIIDGSPRLLNTDHPPCQLDIR FT LMRHKAVWINPQDVQQQPQDLQSQVPAAGNSGTHFVTDAASPSGPSPSCLGDSLAETTL FT SEDTTDSVGSASPHGSSEKSSSFSLSSTEVHMVRPGYSHRVSLPTSPGILATSPYPETD FT SAFFEPSHLTSAADE" FT CDS complement(join(46917520..46917632,46918876..46918966, FT 46919582..46919735,46923421..46923482,46924248..46924486, FT 46930567..46930631,46933621..46933766,46935576..46935708, FT 46936673..46936733,46937250..46937348,46942177..46942384, FT 46942868..46942950,46946076..46946610)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-005" FT /standard_name="OTTHUMP00000198242" FT /product="chromosome 13 open reading frame 18" FT /protein_id="CAP19142.1" FT /translation="MVSQSTVRQDSPVEPWEGISDHSGIIDGSPRLLNTDHPPCQLDIR FT LMRHKAVWINPQDVQQQPQDLQSQVPAAGNSGTHFVTDAASPSGPSPSCLGDSLAETTL FT SEDTTDSVGSASPHGSSEKSSSFSLSSTEVHMVRPGYSHRVSLPTSPGILATSPYPETD FT SAFFEPSHLTSAADEGAVQVSRRTISSNSFSPEVFVLPVDVEKENAHFYVADMIISAME FT KMKCNILSQQQTESWSKEVSGLLGSDQPDSEMTFDTNIKQESGSSTSSYSGYEGCAVLQ FT VSPVTETRTYHDVKEICKCDVDEFVILELGDFNDITETCSCSCSSSKSVTYEPDFNSAE FT LLAKELYRVFQKCWILSVVNSQLAGSLSAAGSIVVNEECVRKDFESSMNVVQEIKFKSR FT IRGTEDWAPPRFQIIFNIHPPLKRDLVVAAQNFFCAGCGTPVEPKFVKRLRYCEYLGKY FT FCDCCHSYAESCIPARILMMWDFKKYYVSNFSKQLLDSIWHQPIFNLLSIGQSLYAKAK FT ELDRVKEIQEQLFHIKKLLKTCRFANSALKEFEQVPGHLTDELHLFSLEDLVRIKKGLL FT APLLKDILKASLAHVAGCELCQGKGFICEFCQNTTVIFPFQTATCRRCSACRACFHKQC FT FQSSECPRCARITARRKLLESVASAAT" FT CDS complement(join(46917447..46917632,46918876..46918966, FT 46923421..46923482,46924248..46924486,46930567..46930631, FT 46933621..46933766,46935576..46935708,46936673..46936733, FT 46937250..46937348,46942177..46942384,46942868..46942950, FT 46946076..46946610)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-001" FT /standard_name="OTTHUMP00000018366" FT /product="chromosome 13 open reading frame 18" FT /note="match: proteins: Sw:Q9H714.2" FT /protein_id="CAH71682.2" FT /translation="MVSQSTVRQDSPVEPWEGISDHSGIIDGSPRLLNTDHPPCQLDIR FT LMRHKAVWINPQDVQQQPQDLQSQVPAAGNSGTHFVTDAASPSGPSPSCLGDSLAETTL FT SEDTTDSVGSASPHGSSEKSSSFSLSSTEVHMVRPGYSHRVSLPTSPGILATSPYPETD FT SAFFEPSHLTSAADEGAVQVSRRTISSNSFSPEVFVLPVDVEKENAHFYVADMIISAME FT KMKCNILSQQQTESWSKEVSGLLGSDQPDSEMTFDTNIKQESGSSTSSYSGYEGCAVLQ FT VSPVTETRTYHDVKEICKCDVDEFVILELGDFNDITETCSCSCSSSKSVTYEPDFNSAE FT LLAKELYRVFQKCWILSVVNSQLAGSLSAAGSIVVNEECVRKDFESSMNVVQEIKFKSR FT IRGTEDWAPPRFQIIFNIHPPLKRDLVVAAQNFFCAGCGTPVEPKFVKRLRYCEYLGKY FT FCDCCHSYAESCIPARILMMWDFKKYYVSNFSKQLLDSIWHQPIFNLLSIGQSLYAKAK FT ELDRVKEIQEQLFHIKKLLKTCRFANSCVKERALFVNFARIRLSSSHFRQQHVEDVQRA FT GLAFTNSASSPPSAPGVRGSQRGENFWKVWPLQQHDAPEYCEKDCSTCLMITPICVYYW FT " FT CDS complement(join(<46942209..46942384,46942868..46942950, FT 46946076..46946205)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-007" FT /standard_name="OTTHUMP00000018369" FT /product="chromosome 13 open reading frame 18" FT /protein_id="CAH71683.1" FT /translation="MVRPGYSHRVSLPTSPGILATSPYPETDSAFFEPSHLTSAADEGA FT VQVSRRTISSNSFSPEVFVLPVDVEKENAHFYVADMIISAMEKMKCNILSQQQTESWSK FT EVSGLLGSDQPDSEMTFDTNIKQESG" FT CDS join(complement(AL137141.10:39111..39195), FT complement(AL137141.10:24041..24718), FT complement(AL137141.10:23497..23565), FT complement(AL137141.10:17881..18038), FT complement(AL137141.10:5605..5703), FT complement(AL137141.10:1739..1875),46836044..46836127, FT 46840868..>46841076) FT /gene="LRRC63" FT /locus_tag="RP11-139H14.4-001" FT /standard_name="OTTHUMP00000018363" FT /product="leucine rich repeat containing 63" FT /protein_id="CAM14704.1" FT /translation="MQKPPLLLRRPLPPKFTKLSLHEKKTHTAKTGKIESLHVAFTEDE FT TTSIKMDRTRFPDVLRNQSLTPINIQNIFLDHCVQERVTAISSPQKSTKHVREQIPDTA FT TGSIFFPHCNSASTRIFGKQTNKMESSRKFKTMKDVYTEKRLENILILSSKFSKPKSTP FT GSVIAQKLEKMHPKHQPLPESPGYTYQHISRDLSATVPSPPPMTVSMKPEGQWPEHFKS FT TATLTLRVTEFPGFVSLPTPVLPRKPHRQSVIETLVTENGNIESVPKQIPPRPPEGLTK FT TEKIESEIHVVRGEGFKTVAATRYETITAMTNLAIVNCQVYGRNALNLKGFFILNCPDL FT TPLAFQLIYLNLSFNDLHYFPTEILCLKNLQILKLRNNPIKEIPSEIQQLEFLRIFTIA FT FNLITVLPIGLFSLSYLEELDVSYNELTFIPNEIQKLRSLEKLTVDGNELSFFPHGILK FT LNLTKIQFENNFTHPCFWRDNYLNNPQQLTQIISLFIVQNKLHKFYDK" FT mRNA join(complement(AL137141.10:39971..40282), FT complement(AL137141.10:39111..39228), FT complement(AL137141.10:24041..24718), FT complement(AL137141.10:23497..23565), FT complement(AL137141.10:17881..18038), FT complement(AL137141.10:5605..5703), FT complement(AL137141.10:1739..1875),46836044..46836127, FT 46840868..>46841076) FT /gene="LRRC63" FT /locus_tag="RP11-139H14.4-001" FT /product="leucine rich repeat containing 63" FT /note="match: cDNAs: Em:BC030276.1" FT mRNA complement(join(46917102..46917632,46918876..46918966, FT 46919582..46919735,46923421..46923482,46924248..46924486, FT 46930567..46930631,46933621..46933766,46935576..46935708, FT 46936673..46936733,46937250..46937344,46942173..46942384, FT 46942868..46942950,46952025..46952140,46961812..46962014, FT AL138686.14:41775..42580)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-012" FT /product="chromosome 13 open reading frame 18" FT /note="match: cDNAs: Em:AK125950.1" FT mRNA complement(join(46917099..46917632,46918876..46918966, FT 46919582..46919735,46923421..46923482,46924248..46925142)) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-010" FT /product="chromosome 13 open reading frame 18" FT /note="match: cDNAs: Em:AK125750.1" FT /note="match: ESTs: Em:BG397454.1" FT polyA_site complement(46917099) FT misc_feature complement(46877093) FT /note="Clone_right_end: RP11-189B4" FT misc_feature complement(46870086) FT /note="Clone_left_end: RP11-13N21" FT polyA_signal 46846000..46846005 FT CDS 46844212..46844752 FT /pseudo FT /locus_tag="RP11-247M1.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q9NX38 Tr:Q9VFR1" FT misc_feature complement(46826365) FT /note="Clone_left_end: RP11-247M1" FT misc_feature 46971746..47086269 FT /note="annotated region of clone" FT polyA_signal complement(47010881..47010886) FT mRNA join(complement(47011520..47012325),AL139801.17:9732..9934, FT AL139801.17:19606..19721,AL139801.17:28796..28878, FT AL139801.17:29362..29573,AL139801.17:34402..34496, FT AL139801.17:35013..35073,AL139801.17:36038..36170, FT AL139801.17:37980..38125,AL139801.17:41115..41179, FT AL139801.17:47260..47498,AL139801.17:48264..48325, FT AL139801.17:52011..52164,AL139801.17:52780..52870, FT AL139801.17:54114..54644) FT /gene="C13orf18" FT /locus_tag="RP11-247M1.4-012" FT /product="chromosome 13 open reading frame 18" FT /note="match: cDNAs: Em:AK125950.1" FT CDS complement(47011529..47012123) FT /pseudo FT /locus_tag="RP11-189B4.1-001" FT /product="protein phosphatase 1, regulatory (inhibitor) FT subunit 2 (PPP1R2) pseudogene" FT /note="match: proteins: Sw:O14990 Sw:P11845 Sw:P41236 FT Sw:P50411 Sw:Q9DCL8 Tr:Q96PQ5 Tr:Q9CT86 Tr:Q9CZ35 Tr:Q9D5H2 FT Tr:Q9D5I7 Tr:Q9D5P2" FT misc_feature 47016510 FT /note="Clone_left_end: RP11-398G13" FT mRNA join(47029338..47029650,47031979..47032050, FT 47035082..47035157) FT /locus_tag="RP11-189B4.5-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI807181.1 Em:AW269438.1" FT mRNA complement(join(47029488..47029650,47031975..47032373)) FT /locus_tag="RP11-189B4.6-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL046588.1" FT CDS 47034744..47035256 FT /pseudo FT /locus_tag="RP11-189B4.2-001" FT /product="olfactory receptor pseudogene" FT /note="match: proteins: Sw:Q60882 Sw:Q8VG07 Sw:Q96KK4 FT Sw:Q9GZK4 Tr:Q8VES9 Tr:Q8VET1 Tr:Q8VEU6 Tr:Q8VF61 Tr:Q8VFA5 FT Tr:Q8VFG4 Tr:Q8VFJ4 Tr:Q8VFL4 Tr:Q8VFR0 Tr:Q8VFU3 Tr:Q8VFW9 FT Tr:Q8VFX6 Tr:Q8VG20 Tr:Q8VG39 Tr:Q8VG52 Tr:Q8VGA8 Tr:Q8VGD5 FT Tr:Q8VGG9 Tr:Q8VGJ9 Tr:Q8VGU1 Tr:Q8VGU6 Tr:Q8WZ85 Tr:Q920Z0 FT Tr:Q9EQA4 Tr:Q9MYR2 Tr:Q9N215 Tr:Q9P1R1 Tr:Q9QW36 Tr:Q9TSM9 FT Tr:Q9UPJ1" FT CDS 47065065..47065256 FT /pseudo FT /locus_tag="RP11-189B4.3-001" FT /product="COX17 cytochrome c oxidase assembly homolog (S. FT cerevisiae) pseudogene (COX17)" FT /note="match: proteins: Sw:P56394.2 Sw:P81045.1 Sw:Q14061.2 FT Sw:Q6J3Q7.3" FT /db_xref="PSEUDO:CAH71087.1" FT CDS 47079253..47079571 FT /pseudo FT /locus_tag="RP11-189B4.4-001" FT /product="FK506 binding protein 1A, 12kDa (FKBP1A) FT pseudogene" FT /note="match: proteins: Sw:O60046 Sw:O74191 Sw:P18203 FT Sw:P26883 Sw:P45523 Sw:P62943 Sw:P65764 Sw:P68107 Sw:Q09734 FT Sw:Q26486 Sw:Q41649 Sw:Q43207 Sw:Q61576 Sw:Q62658 Sw:Q96AY3 FT Tr:P73037 Tr:Q8XZ41 Tr:Q8Y1A6 Tr:Q8YZA2 Tr:Q8Z1Y4 Tr:Q8ZLL6 FT Tr:Q90ZG0 Tr:Q966Y5 Tr:Q9KLT0 Tr:Q9RJ63" FT misc_feature 47084269 FT /note="Clone_right_end: RP11-189B4" FT misc_feature 47089547 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 230bp by restriction digest data" FT misc_feature 47122277 FT /note="Clone_left_end: RP11-417C20" FT misc_feature 47122477..47287496 FT /note="annotated region of clone" FT mRNA join(47127335..47127838,47224336..47224480, FT 47243165..47243291,47255876..47255981,47260040..47260176, FT 47261987..47262114,47263268..47263331,47266671..47266776, FT 47269028..47269175,47273476..47273538,47275256..47275342, FT 47279203..47279292,47279403..47279439,47285926..47285979, FT 47286660..47286732,AL359880.8:9960..10069, FT AL359880.8:15586..15723,AL359880.8:20660..20737, FT AL359880.8:28381..30334) FT /gene="LRCH1" FT /locus_tag="RP11-147L20.3-001" FT /product="leucine-rich repeats and calponin homology (CH) FT domain containing 1" FT /note="match: cDNAs: Em:AB023233" FT /note="match: ESTs: Em:AA579863 Em:AL530544 Em:AW362925 FT Em:BB612742 Em:BB613925 Em:BG500181 Em:BI132857 Em:BI660611 FT Em:BI769606 Em:BQ213804 Em:BQ229096 Em:D79008" FT CDS join(47127532..47127838,47224336..47224480, FT 47243165..47243291,47255876..47255981,47260040..47260176, FT 47261987..47262114,47263268..47263331,47266671..47266776, FT 47269028..47269175,47273476..47273538,47275256..47275342, FT 47279203..47279292,47279403..47279439,47285926..47285979, FT 47286660..47286732,AL359880.8:9960..10069, FT AL359880.8:15586..15723,AL359880.8:20660..20737, FT AL359880.8:28381..28587) FT /gene="LRCH1" FT /locus_tag="RP11-147L20.3-001" FT /standard_name="OTTHUMP00000018372" FT /product="leucine-rich repeats and calponin homology (CH) FT domain containing 1" FT /note="match: proteins: Sw:O75427 Sw:Q921G6 Sw:Q9Y2L9 FT Tr:Q9NT52" FT /protein_id="CAH73642.1" FT /translation="MATPGSEPQPFVPALSVATLHPLHHPHHHHHHHQHHGGTGAPGGA FT GGGGGGSGGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTVQADL FT SKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEAIVNLQMLTYLNLSRNQLSALPACLC FT GLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRRNY FT LKVLPQELVDLSLVKFDFSCNKVLVIPICFREMKQLQVLLLENNPLQSPPAQICTKGKV FT HIFKYLSIQACQIKTADSLYLHTMERPHLHQHVEDGKKDSDSGVGSDNGDKRLSATEPS FT DEDTVSLNVPMSNIMEEEQIIKEDSCHRLSPVKGEFHQEFQPEPSLLGDSTNSGEERDQ FT FTDRADGLHSEFMNYKARFSGSTTAEDCEELLRIEEDVHWQTEGIISSSKDQDMDIAMI FT EQLREAVDLLQDPNGLSTDITERSVLNLYPMGSAEALELQDSALNGQIQLETSPVCEVQ FT SDLTLQSNGSQYSPNEIRENSPAVSPTTNSTAPFGLKPRSVFLRPQRNLESIDPQFTIR FT RKMEQMREEKELVEQLRESIEMRLKVSLHEDLGAALMDGVVLCHLVNHIRPRSVASIHV FT PSPAVPKLSMAKCRRNVENFLEACRKLGVPEADLCSPCDILQLDFRHIRKTVDTLLALG FT EKAPPPTSALRSRDLIGFCLVHILFIVLVYITYHWNALSA" FT misc_feature 47192871 FT /note="Clone_right_end: RP11-398G13" FT misc_feature 47209682..47210031 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR.Restriction FT digest data confirm the assembly" FT misc_feature 47210095..47210122 FT /note="Number of T's varies between subclones" FT misc_feature 47220132 FT /note="Clone_left_end: RP11-165D6" FT misc_feature 47255681..47255746 FT /note="Single clone region. Sequence from clone PCR only" FT CDS join(<47269027..47269175,47273476..47273538, FT 47275256..47275342,47279203..47279292,47279403..47279439, FT 47285926..47285979,47286660..47286732, FT AL359880.8:9960..10069,AL359880.8:15586..15723, FT AL359880.8:20660..20737,AL136958.9:6114..6224) FT /codon_start=1 FT /gene="LRCH1" FT /locus_tag="RP11-147L20.3-002" FT /standard_name="OTTHUMP00000018373" FT /product="leucine-rich repeats and calponin homology (CH) FT domain containing 1" FT /note="match: proteins: Sw:P41737 Tr:Q9P233" FT /protein_id="CAH73643.1" FT /translation="GEFHQEFQPEPSLLGDSTNSGEERDQFTDRADGLHSEFMNYKARF FT SGSTTAEDCEELLRIEEDVHWQTEGIISSSKDQDMDIAMIEQLREAVDLLQDPNGLSTD FT ITERSVLNLYPMGSAEALELQDSALNGQIQLETSPVCEVQSDLTLQSNGSQYSPNEIRE FT NSPAVSPTTNSTAPFGLKPRSVFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRES FT IEMRLKVSLHEDLGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVPKLSMAKCRRNVEN FT FLEACRKLGVPEEKLCLPHHILEEKGLVKVGITIQALLDITVTKALFT" FT mRNA join(<47269027..47269175,47273476..47273538, FT 47275256..47275342,47279203..47279292,47279403..47279439, FT 47285926..47285979,47286660..47286732, FT AL359880.8:9960..10069,AL359880.8:15586..15723, FT AL359880.8:20660..20737,AL136958.9:6114..8615) FT /gene="LRCH1" FT /locus_tag="RP11-147L20.3-002" FT /product="leucine-rich repeats and calponin homology (CH) FT domain containing 1" FT /note="match: cDNAs: Em:BC026097 Em:X79682" FT /note="match: ESTs: Em:AA001250 Em:AA701916 Em:AA928359 FT Em:AI038371 Em:AI080462 Em:AI245862 Em:AI308154 Em:AI346038 FT Em:AW007739 Em:AW105617 Em:AW235561 Em:AW475035 Em:AW576241 FT Em:AW576824 Em:AW576845 Em:AW576857 Em:AW968261 Em:AW968329 FT Em:BE646323 Em:BE856752 Em:BF198043 Em:BF939093 Em:BF977177 FT Em:BG620457 Em:BG778779 Em:BI858367 Em:BM991796 Em:BM994390 FT Em:BQ010804 Em:BQ293260 Em:BQ421909" FT misc_feature 47287396 FT /note="Clone_right_end: RP11-417C20" FT misc_feature 47287497..47318661 FT /note="annotated region of clone" FT mRNA join(AL138704.12:4959..5462,AL138704.12:101960..102104, FT AL138704.12:120789..120915,AL138704.12:133500..133605, FT AL138704.12:137664..137800,AL138704.12:139611..139738, FT AL138704.12:140892..140955,AL138704.12:144295..144400, FT AL138704.12:146652..146799,AL138704.12:151100..151162, FT AL138704.12:152880..152966,AL138704.12:156827..156916, FT AL138704.12:157027..157063,AL138704.12:163550..163603, FT AL138704.12:164284..164356,47297356..47297465, FT 47302982..47303119,47308056..47308133,47315777..47317730) FT /gene="LRCH1" FT /locus_tag="RP11-147L20.3-001" FT /product="leucine-rich repeats and calponin homology (CH) FT domain containing 1" FT /note="match: cDNAs: Em:AB023233" FT /note="match: ESTs: Em:AA579863 Em:AL530544 Em:AW362925 FT Em:BB612742 Em:BB613925 Em:BG500181 Em:BI132857 Em:BI660611 FT Em:BI769606 Em:BQ213804 Em:BQ229096 Em:D79008" FT CDS join(AL138704.12:5156..5462,AL138704.12:101960..102104, FT AL138704.12:120789..120915,AL138704.12:133500..133605, FT AL138704.12:137664..137800,AL138704.12:139611..139738, FT AL138704.12:140892..140955,AL138704.12:144295..144400, FT AL138704.12:146652..146799,AL138704.12:151100..151162, FT AL138704.12:152880..152966,AL138704.12:156827..156916, FT AL138704.12:157027..157063,AL138704.12:163550..163603, FT AL138704.12:164284..164356,47297356..47297465, FT 47302982..47303119,47308056..47308133,47315777..47315983) FT /gene="LRCH1" FT /locus_tag="RP11-147L20.3-001" FT /standard_name="OTTHUMP00000018372" FT /product="leucine-rich repeats and calponin homology (CH) FT domain containing 1" FT /note="match: proteins: Sw:O75427 Sw:Q921G6 Sw:Q9Y2L9 FT Tr:Q9NT52" FT /protein_id="CAH70792.1" FT /translation="MATPGSEPQPFVPALSVATLHPLHHPHHHHHHHQHHGGTGAPGGA FT GGGGGGSGGFNLPLNRGLERALEEAANSGGLNLSARKLKEFPRTAAPGHDLSDTVQADL FT SKNRLVEVPMELCHFVSLEILNLYHNCIRVIPEAIVNLQMLTYLNLSRNQLSALPACLC FT GLPLKVLIASNNKLGSLPEEIGQLKQLMELDVSCNEITALPQQIGQLKSLRELNVRRNY FT LKVLPQELVDLSLVKFDFSCNKVLVIPICFREMKQLQVLLLENNPLQSPPAQICTKGKV FT HIFKYLSIQACQIKTADSLYLHTMERPHLHQHVEDGKKDSDSGVGSDNGDKRLSATEPS FT DEDTVSLNVPMSNIMEEEQIIKEDSCHRLSPVKGEFHQEFQPEPSLLGDSTNSGEERDQ FT FTDRADGLHSEFMNYKARFSGSTTAEDCEELLRIEEDVHWQTEGIISSSKDQDMDIAMI FT EQLREAVDLLQDPNGLSTDITERSVLNLYPMGSAEALELQDSALNGQIQLETSPVCEVQ FT SDLTLQSNGSQYSPNEIRENSPAVSPTTNSTAPFGLKPRSVFLRPQRNLESIDPQFTIR FT RKMEQMREEKELVEQLRESIEMRLKVSLHEDLGAALMDGVVLCHLVNHIRPRSVASIHV FT PSPAVPKLSMAKCRRNVENFLEACRKLGVPEADLCSPCDILQLDFRHIRKTVDTLLALG FT EKAPPPTSALRSRDLIGFCLVHILFIVLVYITYHWNALSA" FT polyA_signal 47317709..47317714 FT misc_feature 47318462 FT /note="Clone_left_end: RP11-147L20" FT CDS join(AL138704.12:<146651..146799, FT AL138704.12:151100..151162,AL138704.12:152880..152966, FT AL138704.12:156827..156916,AL138704.12:157027..157063, FT AL138704.12:163550..163603,AL138704.12:164284..164356, FT 47297356..47297465,47302982..47303119,47308056..47308133, FT AL136958.9:6114..6224) FT /codon_start=1 FT /gene="LRCH1" FT /locus_tag="RP11-147L20.3-002" FT /standard_name="OTTHUMP00000018373" FT /product="leucine-rich repeats and calponin homology (CH) FT domain containing 1" FT /note="match: proteins: Sw:P41737 Tr:Q9P233" FT /protein_id="CAH70793.1" FT /translation="GEFHQEFQPEPSLLGDSTNSGEERDQFTDRADGLHSEFMNYKARF FT SGSTTAEDCEELLRIEEDVHWQTEGIISSSKDQDMDIAMIEQLREAVDLLQDPNGLSTD FT ITERSVLNLYPMGSAEALELQDSALNGQIQLETSPVCEVQSDLTLQSNGSQYSPNEIRE FT NSPAVSPTTNSTAPFGLKPRSVFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRES FT IEMRLKVSLHEDLGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVPKLSMAKCRRNVEN FT FLEACRKLGVPEEKLCLPHHILEEKGLVKVGITIQALLDITVTKALFT" FT mRNA join(AL138704.12:<146651..146799, FT AL138704.12:151100..151162,AL138704.12:152880..152966, FT AL138704.12:156827..156916,AL138704.12:157027..157063, FT AL138704.12:163550..163603,AL138704.12:164284..164356, FT 47297356..47297465,47302982..47303119,47308056..47308133, FT AL136958.9:6114..8615) FT /gene="LRCH1" FT /locus_tag="RP11-147L20.3-002" FT /product="leucine-rich repeats and calponin homology (CH) FT domain containing 1" FT /note="match: cDNAs: Em:BC026097 Em:X79682" FT /note="match: ESTs: Em:AA001250 Em:AA701916 Em:AA928359 FT Em:AI038371 Em:AI080462 Em:AI245862 Em:AI308154 Em:AI346038 FT Em:AW007739 Em:AW105617 Em:AW235561 Em:AW475035 Em:AW576241 FT Em:AW576824 Em:AW576845 Em:AW576857 Em:AW968261 Em:AW968329 FT Em:BE646323 Em:BE856752 Em:BF198043 Em:BF939093 Em:BF977177 FT Em:BG620457 Em:BG778779 Em:BI858367 Em:BM991796 Em:BM994390 FT Em:BQ010804 Em:BQ293260 Em:BQ421909" FT misc_feature 47318662..47424878 FT /note="annotated region of clone" FT polyA_signal 47325673..47325678 FT polyA_site 47325695 FT polyA_signal 47327153..47327158 FT polyA_site 47327176 FT misc_feature 47328608..47328897 FT /note="Sequence from overlapping clone bA165D6 (AL359880). FT Assembly confirmed by restriction digest" FT polyA_site complement(47345392) FT polyA_signal complement(47345404..47345409) FT mRNA complement(join(47351242..47351758,47354070..47354166)) FT /gene="ESD" FT /locus_tag="RP11-147L20.1-005" FT /product="esterase D/formylglutathione hydrolase" FT /note="match: ESTs: Em:AW977731" FT mRNA complement(join(47349518..47349827,47351591..47351758, FT 47354070..47354168,47355631..47355750,47356802..47356926, FT 47358387..>47358485)) FT /gene="ESD" FT /locus_tag="RP11-147L20.1-004" FT /product="esterase D/formylglutathione hydrolase" FT /note="match: ESTs: Em:BE876462" FT CDS complement(join(47349747..47349827,47351591..47351758, FT 47354070..47354168,47355631..47355750,47356802..47356926, FT 47358387..>47358485)) FT /codon_start=3 FT /gene="ESD" FT /locus_tag="RP11-147L20.1-004" FT /standard_name="OTTHUMP00000018376" FT /product="esterase D/formylglutathione hydrolase" FT /protein_id="CAI12225.1" FT /translation="LTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWD FT FGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALI FT CALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQL FT DILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEHGRVKSGLHSLKRISLRFV FT VIESTTE" FT CDS complement(join(47345551..47345631,47351591..47351758, FT 47354070..47354168,47355631..47355750,47356802..47356926, FT 47358387..47358485,47361156..47361225)) FT /gene="ESD" FT /locus_tag="RP11-147L20.1-003" FT /standard_name="OTTHUMP00000018375" FT /product="esterase D/formylglutathione hydrolase" FT /protein_id="CAI12226.1" FT /translation="MKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEH FT GLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLIN FT ANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYL FT GTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVV FT FRLQEGYDHSYYFIATFITDHIRHHAKYLNA" FT mRNA complement(join(47407513..47409774, FT AL160397.17:41747..41947,AL160397.17:44852..45395)) FT /gene="HTR2A" FT /locus_tag="RP11-147L20.2-001" FT /product="5-hydroxytryptamine (serotonin) receptor 2A" FT /note="match: cDNAs: Em:BC069356.1 Em:BC069576.1 FT Em:BC074848.2 Em:BC074849.2 Em:S71229.1 Em:X57830.1" FT CDS complement(join(47408972..47409774, FT AL160397.17:41747..41947,AL160397.17:44852..45263)) FT /gene="HTR2A" FT /locus_tag="RP11-147L20.2-001" FT /standard_name="OTTHUMP00000018378" FT /product="5-hydroxytryptamine (serotonin) receptor 2A" FT /note="match: proteins: Sw:P28223.2 Sw:P35363.1 Sw:P50128.1 FT Sw:Q5R4Q6.1 Tr:Q5T8C0.1" FT /protein_id="CAI12227.1" FT /translation="MDILCEENTSLSSTTNSLMQLNDDTRLYSNDFNSGEANTSDAFNW FT TVDSENRTNLSCEGCLSPSCLSLLHLQEKNWSALLTAVVIILTIAGNILVIMAVSLEKK FT LQNATNYFLMSLAIADMLLGFLVMPVSMLTILYGYRWPLPSKLCAVWIYLDVLFSTASI FT MHLCAISLDRYVAIQNPIHHSRFNSRTKAFLKIIAVWTISVGISMPIPVFGLQDDSKVF FT KEGSCLLADDNFVLIGSFVSFFIPLTIMVITYFLTIKSLQKEATLCVSDLGTRAKLASF FT SFLPQSSLSSEKLFQRSIHREPGSYTGRRTMQSISNEQKACKVLGIVFFLFVVMWCPFF FT ITNIMAVICKESCNEDVIGALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQY FT KENKKPLQLILVNTIPALAYKSSQLQMGQKKNSKQDAKTTDNDCSMVALGKQHSEEASK FT DNSDGVNEKVSCV" FT CDS complement(join(47345551..47345631,47351591..47351758, FT 47354070..47354168,47355631..47355750,47356802..47356926, FT 47358387..47358485,47361156..47361244,47365481..47365548)) FT /gene="ESD" FT /locus_tag="RP11-147L20.1-001" FT /standard_name="OTTHUMP00000018374" FT /product="esterase D/formylglutathione hydrolase" FT /note="match: proteins: Sw:P10768.2 Sw:Q9GJT2.1 Sw:Q9R0P3.1 FT Tr:Q567K2.1 Tr:Q5TBV0.1" FT /protein_id="CAI12228.1" FT /translation="MALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKC FT PALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAG FT FYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNP FT GKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQ FT GKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYLN FT A" FT mRNA complement(join(47354089..47354168,47355631..47355750, FT 47356802..47356926,47358387..47358485,47359784..47359854, FT 47361156..47361244,47365481..47365555,47367532..47367573)) FT /gene="ESD" FT /locus_tag="RP11-147L20.1-002" FT /product="esterase D/formylglutathione hydrolase" FT /note="match: ESTs: Em:AA425269 Em:BE540181 Em:BM708986" FT mRNA complement(join(47345391..47345631,47351591..47351758, FT 47354070..47354168,47355631..47355750,47356802..47356926, FT 47358387..47358485,47361156..47361244,47365481..47365555, FT 47367532..47367579,47371240..47371367)) FT /gene="ESD" FT /locus_tag="RP11-147L20.1-001" FT /product="esterase D/formylglutathione hydrolase" FT /note="match: ESTs: Em:AA936396.1 Em:AI290379.1 FT Em:CA423386.1 Em:CA446023.1" FT /note="match: cDNAs: Em:AF112219.1 Em:AK098540.1 FT Em:BC001169.1 Em:BT007059.1" FT mRNA complement(join(47345470..47345631,47351591..47351758, FT 47354070..47354168,47355631..47355750,47356802..47356926, FT 47358387..47358485,47361156..47361244,47364732..47364796, FT 47365481..47365555,47367532..47367579,47371240..47371268)) FT /gene="ESD" FT /locus_tag="RP11-147L20.1-003" FT /product="esterase D/formylglutathione hydrolase" FT /note="match: ESTs: Em:AA030897" FT /note="match: cDNAs: Em:BC002483" FT misc_feature 47378866 FT /note="Clone_right_end: RP11-165D6" FT misc_feature 47424679 FT /note="Clone_left_end: RP11-83N23" FT CDS join(AL138704.12:<146651..146799, FT AL138704.12:151100..151162,AL138704.12:152880..152966, FT AL138704.12:156827..156916,AL138704.12:157027..157063, FT AL138704.12:163550..163603,AL138704.12:164284..164356, FT AL359880.8:9960..10069,AL359880.8:15586..15723, FT AL359880.8:20660..20737,47324675..47324785) FT /codon_start=1 FT /gene="LRCH1" FT /locus_tag="RP11-147L20.3-002" FT /standard_name="OTTHUMP00000018373" FT /product="leucine-rich repeats and calponin homology (CH) FT domain containing 1" FT /note="match: proteins: Sw:P41737 Tr:Q9P233" FT /protein_id="CAI12229.1" FT /translation="GEFHQEFQPEPSLLGDSTNSGEERDQFTDRADGLHSEFMNYKARF FT SGSTTAEDCEELLRIEEDVHWQTEGIISSSKDQDMDIAMIEQLREAVDLLQDPNGLSTD FT ITERSVLNLYPMGSAEALELQDSALNGQIQLETSPVCEVQSDLTLQSNGSQYSPNEIRE FT NSPAVSPTTNSTAPFGLKPRSVFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRES FT IEMRLKVSLHEDLGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVPKLSMAKCRRNVEN FT FLEACRKLGVPEEKLCLPHHILEEKGLVKVGITIQALLDITVTKALFT" FT mRNA join(AL138704.12:<146651..146799, FT AL138704.12:151100..151162,AL138704.12:152880..152966, FT AL138704.12:156827..156916,AL138704.12:157027..157063, FT AL138704.12:163550..163603,AL138704.12:164284..164356, FT AL359880.8:9960..10069,AL359880.8:15586..15723, FT AL359880.8:20660..20737,47324675..47327176) FT /gene="LRCH1" FT /locus_tag="RP11-147L20.3-002" FT /product="leucine-rich repeats and calponin homology (CH) FT domain containing 1" FT /note="match: ESTs: Em:AA001250 Em:AA701916 Em:AA928359 FT Em:AI038371 Em:AI080462 Em:AI245862 Em:AI308154 Em:AI346038 FT Em:AW007739 Em:AW105617 Em:AW235561 Em:AW475035 Em:AW576241 FT Em:AW576824 Em:AW576845 Em:AW576857 Em:AW968261 Em:AW968329 FT Em:BE646323 Em:BE856752 Em:BF198043 Em:BF939093 Em:BF977177 FT Em:BG620457 Em:BG778779 Em:BI858367 Em:BM991796 Em:BM994390 FT Em:BQ010804 Em:BQ293260 Em:BQ421909" FT /note="match: cDNAs: Em:BC026097 Em:X79682" FT misc_feature 47424879..47626835 FT /note="annotated region of clone" FT mRNA join(47426278..47426361,47430225..47430434) FT /locus_tag="RP11-83N23.2-003" FT /product="novel transcript" FT /note="match: ESTs: Em:AI216351" FT mRNA join(47426287..47426361,47428074..47428382) FT /locus_tag="RP11-83N23.2-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AW469493" FT mRNA join(47426287..47426361,47428074..47428216, FT 47430225..47430434) FT /locus_tag="RP11-83N23.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI914390" FT polyA_signal 47428342..47428347 FT polyA_site 47428382 FT polyA_signal 47430410..47430415 FT polyA_site 47430432 FT misc_feature 47439755 FT /note="Sequence from overlapping clone bA147L20 (AL136958). FT Assembly confirmed by restriction digest data" FT mRNA complement(join(AL136958.9:88952..91213,47466525..47466725, FT 47469630..47470173)) FT /gene="HTR2A" FT /locus_tag="RP11-147L20.2-001" FT /product="5-hydroxytryptamine (serotonin) receptor 2A" FT /note="match: cDNAs: Em:BC069356.1 Em:BC069576.1 FT Em:BC074848.2 Em:BC074849.2 Em:S71229.1 Em:X57830.1" FT CDS complement(join(AL136958.9:90411..91213,47466525..47466725, FT 47469630..47470041)) FT /gene="HTR2A" FT /locus_tag="RP11-147L20.2-001" FT /standard_name="OTTHUMP00000018378" FT /product="5-hydroxytryptamine (serotonin) receptor 2A" FT /note="match: proteins: Sw:P28223.2 Sw:P35363.1 Sw:P50128.1 FT Sw:Q5R4Q6.1 Tr:Q5T8C0.1" FT /protein_id="CAI16877.1" FT /translation="MDILCEENTSLSSTTNSLMQLNDDTRLYSNDFNSGEANTSDAFNW FT TVDSENRTNLSCEGCLSPSCLSLLHLQEKNWSALLTAVVIILTIAGNILVIMAVSLEKK FT LQNATNYFLMSLAIADMLLGFLVMPVSMLTILYGYRWPLPSKLCAVWIYLDVLFSTASI FT MHLCAISLDRYVAIQNPIHHSRFNSRTKAFLKIIAVWTISVGISMPIPVFGLQDDSKVF FT KEGSCLLADDNFVLIGSFVSFFIPLTIMVITYFLTIKSLQKEATLCVSDLGTRAKLASF FT SFLPQSSLSSEKLFQRSIHREPGSYTGRRTMQSISNEQKACKVLGIVFFLFVVMWCPFF FT ITNIMAVICKESCNEDVIGALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQY FT KENKKPLQLILVNTIPALAYKSSQLQMGQKKNSKQDAKTTDNDCSMVALGKQHSEEASK FT DNSDGVNEKVSCV" FT misc_feature 47474462 FT /note="Clone_right_end: RP11-147L20" FT misc_feature 47475150..47475347 FT /note="Single clone region. Assembly confired by FT restriction digest data" FT misc_feature 47552506..47552708 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone pcr. Restriction FT digest data confirm the assembly" FT misc_feature 47592541..47592621 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 47627168..47627178 FT /note="Sequence from overlapping clone RP11-83N23 FT (AL160397). Assembly confirmed by restriction digest" FT misc_feature 47628835 FT /note="Clone_right_end: RP11-83N23" FT misc_feature 47631870..47631880 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 47631922..47632071 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 47650912 FT /note="Clone_left_end: RP11-184I23" FT misc_feature 47731416 FT /note="Clone_left_end: RP11-94N9" FT misc_feature 47817284 FT /note="Clone_right_end: RP11-184I23" FT misc_feature 47819285..47889310 FT /note="annotated region of clone" FT misc_feature 47861978..47862013 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 47867127..47867172 FT /note="Single clone region. Sequence from clone PCR only" FT CDS 47881217..47881436 FT /pseudo FT /locus_tag="RP11-94N9.1-001" FT /product="guanine nucleotide binding protein (G protein), FT gamma 5 (GNG5) pseudogene" FT /note="match: proteins: Sw:P63219 Sw:Q80SZ7 Sw:Q9Y3K8" FT polyA_signal 47881655..47881660 FT misc_feature 47889111 FT /note="Clone_left_end: RP11-320G21" FT misc_feature 47911957 FT /note="Clone_right_end: RP11-94N9" FT misc_feature 48048441 FT /note="Clone_right_end: RP11-320G21" FT misc_feature 48083022 FT /note="Clone_left_end: RP11-408L13" FT misc_feature 48153424..48153483 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 48210576 FT /note="Clone_left_end: RP11-214O11" FT misc_feature 48212676..48381366 FT /note="annotated region of clone" FT misc_feature 48242469 FT /note="Clone_right_end: RP11-408L13" FT misc_feature 48328336..48328561 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 48328455..48328561 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS 48337595..48338741 FT /pseudo FT /locus_tag="RP11-214O11.1-001" FT /product="nucleosome assembly protein 1-like 1 (NAP1L1) FT pseudogene" FT /note="match: proteins: Sw:P51860 Sw:P55209 Sw:P55209 FT Sw:P78920 Sw:Q78ZA7 Sw:Q794H2 Sw:Q924R9 Sw:Q99457 Sw:Q99733 FT Sw:Q99733 Sw:Q9ULW6 Sw:Q9Z2G8 Tr:P93488 Tr:Q24150 Tr:Q25120 FT Tr:Q9I8H9 Tr:Q9U602 Tr:Q9VAZ1 Tr:Q9W1G7 Tr:Q9ZUP3" FT CDS complement(48340803..48341220) FT /pseudo FT /locus_tag="RP11-214O11.2-001" FT /product="ribosomal protein L27a (RPL27A) pseudogene" FT /note="match: proteins: Sw:O01358 Sw:P02406 Sw:P08978 FT Sw:P14115 Sw:P14115 Sw:P18445 Sw:P36585 Sw:P41092 Sw:P41092 FT Sw:P41092 Sw:P41092 Sw:P46776 Sw:P46776 Sw:P46776 Sw:P46776 FT Sw:P47830 Sw:P48160 Sw:P57728 Sw:P78987 Sw:Q00454 Tr:Q28150 FT Tr:Q8UVF4 Tr:Q90YG8 Tr:Q90YU0 Tr:Q962T8 Tr:Q98TL6 Tr:Q9BKU5 FT Tr:Q9BQQ5 Tr:Q9CQ16 Tr:Q9UVH1" FT misc_feature 48355874 FT /note="Clone_left_end: RP11-279N8" FT misc_feature 48381267 FT /note="Clone_right_end: RP11-214O11" FT misc_feature 48381367..48505784 FT /note="annotated region of clone" FT mRNA complement(join(48399465..48399562,48400274..48400425, FT 48409931..48410091)) FT /locus_tag="RP11-279N8.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF383098" FT mRNA complement(join(48479464..48479533,48481153..48481270, FT 48481466..48481492)) FT /locus_tag="RP11-279N8.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA758995 Em:AL565121" FT misc_feature 48493554..48493662 FT /note="Big dye primer and dGTP big dye chemistries only" FT misc_feature 48496135 FT /note="Clone_left_end: RP11-528D24" FT misc_feature 48505684 FT /note="Clone_right_end: RP11-279N8" FT misc_feature 48505785..48589511 FT /note="annotated region of clone" FT polyA_site complement(48510626) FT polyA_signal complement(48510651..48510656) FT mRNA complement(join(48510634..48510908,48513402..48513498)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-008" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: ESTs: Em:AI285951" FT polyA_site complement(48516791) FT polyA_signal complement(48516806..48516811) FT mRNA complement(join(48510753..48510908,48517480..48517580, FT 48519865..48520074)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-006" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: ESTs: Em:AI341094" FT mRNA complement(join(48510622..48510908,48517480..48517580, FT 48523075..48523163,48523618..48523696)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-007" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: ESTs: Em:BM893738" FT mRNA complement(join(48517496..48517580,48523075..48523163, FT 48523618..48523738,48528275..48528689)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-005" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: ESTs: Em:BG571667" FT mRNA complement(join(48516791..48517580,48523075..48523163, FT 48523618..48523738,48528275..48528417,48528531..48528692, FT 48542730..48542868,48547399..48547527,48562676..48562838, FT 48563017..48563116,48570978..48571158,48575316..48575462)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-001" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: ESTs: Em:BM679226.1 Em:BM931976.1 FT Em:BM976362.1 Em:BQ005709.1 Em:BU740366.1" FT /note="match: cDNAs: Em:AB035863.1 Em:AF058953.1 FT Em:AK001458.1 Em:AK001847.1 Em:BC027587.2 Em:BX640602.1" FT CDS complement(join(48517506..48517580,48523075..48523163, FT 48523618..48523738,48528275..48528417,48528531..48528692, FT 48542730..48542868,48547399..48547527,48562676..48562838, FT 48563017..48563116,48570978..48571158,48575316..48575405)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-001" FT /standard_name="OTTHUMP00000018384" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: proteins: Sw:Q4R517.1 Sw:Q9P2R7.3 Tr:Q5R6V4.1 FT Tr:Q5T9Q4.1" FT /protein_id="CAI15149.1" FT /translation="MAASMFYGRLVAVATLRNHRPRTAQRAAAQVLGSSGLFNNHGLQV FT QQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAG FT GRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYP FT RREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQL FT AQKMGFPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNS FT AYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGG FT TPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLE FT IKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVK FT FQLPI" FT mRNA complement(join(<48528278..48528417,48528531..48528692, FT 48542730..48542868,48547399..48547527,48562676..48562838, FT 48563017..48563116,48575316..>48575376)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-010" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: ESTs: Em:BI667748" FT CDS complement(join(<48528278..48528417,48528531..48528692, FT 48542730..48542868,48547399..48547527,48562676..48562838, FT 48563017..48563116,48575316..>48575376)) FT /codon_start=1 FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-010" FT /standard_name="OTTHUMP00000018388" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /protein_id="CAI15150.1" FT /translation="SGRGHPSEPPASDGPAGCCSGSKDVVIKAQVLAGGRGKGTFESGL FT KGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITME FT RSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIV FT ESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQ FT DWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGG FT ATVHQVTEAFKLITSDK" FT mRNA complement(join(<48528588..48528692,48542730..48542868, FT 48547399..48547527,48575316..48575409)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-009" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: ESTs: Em:BF185198" FT CDS complement(join(<48528588..48528692,48542730..48542868, FT 48547399..48547527,48575316..48575405)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-009" FT /standard_name="OTTHUMP00000018387" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /protein_id="CAI15151.1" FT /translation="MAASMFYGRLVAVATLRNHRPRTAQRAAAQGPVLIGSSHGGVNIE FT DVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENMVKLYSLFLKYDA FT TMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDK" FT mRNA complement(join(48542763..48542868,48547399..48547527, FT 48562676..48562838,48563017..48563116,48568935..48569031, FT 48570978..48571158,48575316..48575402)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-003" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: ESTs: Em:AL533435" FT mRNA complement(join(48562405..48562838,48563017..48563116, FT 48570978..48571158,48575316..48575409)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-004" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: ESTs: Em:AL558175 Em:BI463025" FT mRNA complement(join(48516791..48517580,48523075..48523163, FT 48523618..48523738,48528275..48528417,48528531..48528692, FT 48542730..48542868,48547399..48547527,48562676..48562838, FT 48563017..48563116,48570978..48571110,48575334..48575462)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-002" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: ESTs: Em:AU129080" FT /note="match: cDNAs: Em:AK001458" FT CDS complement(join(48517506..48517580,48523075..48523163, FT 48523618..48523738,48528275..48528417,48528531..48528692, FT 48542730..48542868,48547399..48547527,48562676..48562838, FT 48563017..48563116,48570978..48571110,48575334..48575405)) FT /gene="SUCLA2" FT /locus_tag="RP11-528D24.2-002" FT /standard_name="OTTHUMP00000018385" FT /product="succinate-CoA ligase, ADP-forming, beta subunit" FT /note="match: proteins: Tr:Q5T9Q6.1" FT /protein_id="CAI15153.1" FT /translation="MAASMFYGRLVAVATLRNHRPRTAQQQQRNLSLHEYMSMELLQEA FT GVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPE FT EAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGS FT SHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVESAAENMVKLY FT SLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDERDKD FT AAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTEAFK FT LITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIA FT DSGLKILACDDLDEAARMVVKLSEIVTLAKQAHVDVKFQLPI" FT mRNA join(48575525..48575958,48576571..48576688) FT /locus_tag="RP11-528D24.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI601611" FT /note="match: cDNAs: Em:BC029610" FT misc_feature 48589312 FT /note="Clone_left_end: RP11-90M2" FT misc_feature 48589512..48742005 FT /note="annotated region of clone" FT mRNA join(48611703..48612040,48615056..48615252, FT 48619796..48621282) FT /gene="NUDT15" FT /locus_tag="RP11-90M2.1-001" FT /product="nudix (nucleoside diphosphate linked moiety FT X)-type motif 15" FT /note="match: ESTs: Em:BU622058.1" FT /note="match: cDNAs: Em:AK001818 Em:BC064607.1 FT Em:BC107875.1 Em:CR599539.1" FT CDS join(48611883..48612040,48615056..48615252, FT 48619796..48619935) FT /gene="NUDT15" FT /locus_tag="RP11-90M2.1-001" FT /standard_name="OTTHUMP00000018389" FT /product="nudix (nucleoside diphosphate linked moiety FT X)-type motif 15" FT /note="match: proteins: Sw:Q9NV35.1 Tr:Q32Q27.1" FT /protein_id="CAI17017.1" FT /translation="MTASAQPRGRRPGVGVGVVVTSCKHPRCVLLGKRKGSVGAGSFQL FT PGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFIEKENYHYVTILMKGEVDVT FT HDSEPKNVEPEKNESWEWVPWEELPPLDQLFWGLRCLKEQGYDPFKEDLNHLVGYKGNH FT L" FT misc_feature 48613463..48613863 FT /note="sequence from overlapping clone bA528D24 FT (AL157369).Assembly confirmed by restriction digest" FT polyA_signal 48621337..48621342 FT polyA_site 48621358 FT polyA_site complement(48627459) FT polyA_signal complement(48627474..48627479) FT polyA_site complement(48650716) FT polyA_signal complement(48650731..48650736) FT mRNA join(48651273..48651487,48651578..48651689, FT 48653913..48654127) FT /locus_tag="RP11-90M2.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG189114 Em:BG460082" FT mRNA complement(join(<48627459..48627627,48651289..48651447, FT 48653980..48654111)) FT /gene="MED4" FT /locus_tag="RP11-90M2.2-005" FT /product="mediator complex subunit 4" FT /note="match: ESTs: Em:BM667335.1" FT CDS complement(join(48651275..48651447,48653980..48654111, FT 48655781..48655867,48657507..48657564,48660418..48660588, FT 48664488..48664541)) FT /gene="MED4" FT /locus_tag="RP11-90M2.2-002" FT /standard_name="OTTHUMP00000018391" FT /product="mediator complex subunit 4" FT /protein_id="CAI17018.1" FT /translation="MLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHH FT EMQVLEKEVEKRDSDIQQLQKQLKEAEQILATAVYQAKEKLKSIEKARKGAISSEEIIK FT YAHRISASNAVCAPLTWVPGDPRRPYPTDLEMRSGLLGQMNNPSTNGVNGHLPGDALAA FT GRLPDVLAPQYPWQSNDMSMNMLPPNHSSDFLLEPPGHNKENEDDVEIMSTDSSSSSSE FT SD" FT misc_feature 48666251 FT /note="Clone_right_end: RP11-528D24" FT CDS complement(join(<48651307..48651447,48653980..48654111, FT 48655781..48655867,48657507..48657564,48660418..48660588, FT 48664488..48664554,48667684..48667742)) FT /gene="MED4" FT /locus_tag="RP11-90M2.2-003" FT /standard_name="OTTHUMP00000018392" FT /product="mediator complex subunit 4" FT /protein_id="CAI17019.1" FT /translation="MKLLWWCDWLPERSHVFTQRELIEMLAISRNQKLLQAGEENQVLE FT LLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEKRDSDIQQLQKQLKEAEQILATAVY FT QAKEKLKSIEKARKGAISSEEIIKYAHRISASNAVCAPLTWVPGDPRRPYPTDLEMRSG FT LLGQMNNPSTNGVNGHLPGDALAAGRLPDVLAPQYPWQSNDMSMNMLPPNHSSDFLLEP FT PGHNKENEDDVEIMST" FT mRNA complement(join(48650092..48651447,48653980..48654111, FT 48655781..48655867,48657507..48657564,48660418..48660588, FT 48664488..48664554,48669090..48669240)) FT /gene="MED4" FT /locus_tag="RP11-90M2.2-001" FT /product="mediator complex subunit 4" FT /note="match: ESTs: Em:BM972329.1 Em:BQ014752.1 FT Em:BQ574601.1" FT /note="match: cDNAs: Em:AF161475.1 Em:AF300618.1 FT Em:AK001934.1 Em:AK222713.1 Em:AK223017.1 Em:BC005189.1 FT Em:CR601903.1 Em:CR617886.1" FT CDS complement(join(48651275..48651447,48653980..48654111, FT 48655781..48655867,48657507..48657564,48660418..48660588, FT 48664488..48664554,48669090..48669214)) FT /gene="MED4" FT /locus_tag="RP11-90M2.2-001" FT /standard_name="OTTHUMP00000018390" FT /product="mediator complex subunit 4" FT /note="match: proteins: Sw:Q3SYZ9.1 Sw:Q561Q8.1 Sw:Q9CQA5.1 FT Sw:Q9NPJ6.1 Tr:Q53GB4.1 Tr:Q53H68.1" FT /protein_id="CAI17020.1" FT /translation="MAASSSGEKEKERLGGGLGVAGGNSTRERLLSALEDLEVLSRELI FT EMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEVEKRD FT SDIQQLQKQLKEAEQILATAVYQAKEKLKSIEKARKGAISSEEIIKYAHRISASNAVCA FT PLTWVPGDPRRPYPTDLEMRSGLLGQMNNPSTNGVNGHLPGDALAAGRLPDVLAPQYPW FT QSNDMSMNMLPPNHSSDFLLEPPGHNKENEDDVEIMSTDSSSSSSESD" FT mRNA complement(join(<48651307..48651447,48653980..48654111, FT 48655781..48655867,48657507..48657564,48660418..48660588, FT 48664488..48664554,48667684..48667823,48669090..48669204)) FT /gene="MED4" FT /locus_tag="RP11-90M2.2-003" FT /product="mediator complex subunit 4" FT /note="match: ESTs: Em:BM903930" FT mRNA complement(join(48651154..48651447,48653980..48654098, FT 48660471..48660588,48664488..48664554,48669090..48669238)) FT /gene="MED4" FT /locus_tag="RP11-90M2.2-004" FT /product="mediator complex subunit 4" FT /note="match: ESTs: Em:BG502872 Em:BG505883" FT mRNA complement(join(48651104..48651447,48653980..48654111, FT 48655781..48655867,48657507..48657564,48660418..48660588, FT 48664488..48664554,48669196..48669267)) FT /gene="MED4" FT /locus_tag="RP11-90M2.2-002" FT /product="mediator complex subunit 4" FT /note="match: ESTs: Em:BE565197 Em:BE565886 Em:BE566979 FT Em:BF027819 Em:BF027964 Em:BF243344 Em:BF248477 Em:BF667531 FT Em:BF674549 Em:BG426990 Em:BG428610 Em:BG495545 Em:BG497875 FT Em:BG504294 Em:BG505131 Em:BG565655 Em:BG615394 Em:BG771094 FT Em:BI560289" FT misc_feature 48707702 FT /note="Clone_left_end: RP11-196P14" FT mRNA complement(48708417..48708691) FT /locus_tag="RP11-90M2.3-001" FT /product="novel protein similar to polymerase (RNA) II (DNA FT directed) polypeptide K, 7.0kDa POLR2K" FT /note="match: ESTs: Em:AL558030 Em:BE564243 Em:BE564429 FT Em:BE738085 Em:BE778918 Em:BF027742 Em:BF028489 Em:BF028803 FT Em:BF102754 Em:BF217311 Em:BF247539 Em:BF571698 Em:BF575616 FT Em:BF667211 Em:BF670878 Em:BF673445 Em:BF695759 Em:BG547847 FT Em:BG567235 Em:BG715282 Em:BI259493 Em:BI458153" FT /note="match: cDNAs: Em:AK003023 Em:AK008136 Em:AK008287 FT Em:AK018914 Em:BC000806 Em:BC018157 Em:BC028543 Em:S63758 FT Em:Z47727" FT CDS complement(48708494..48708670) FT /locus_tag="RP11-90M2.3-001" FT /standard_name="OTTHUMP00000018393" FT /product="novel protein similar to polymerase (RNA) II (DNA FT directed) polypeptide K, 7.0kDa POLR2K" FT /note="match: proteins: Sw:P53803 Sw:P53803 Sw:Q63871 FT Tr:Q545V5 Tr:Q8BFX0 Tr:Q9D2S5 Tr:Q9FLM8 Tr:Q9U3I0" FT /protein_id="CAI17021.1" FT /translation="MDTQKDIQTPKQQPMAYNCRECHTENDMKSRDPVKCGECGYRIIY FT KKRTEILVGFDAQ" FT misc_feature 48741905 FT /note="Clone_right_end: RP11-90M2" FT misc_feature 48742006..48862678 FT /note="annotated region of clone" FT misc_feature 48807023 FT /note="Clone_left_end: RP11-305D15" FT mRNA join(48807294..48807613,48827944..48828072, FT 48830313..48830519,48832262..48832372,48832933..48833083, FT 48835275..48836232) FT /gene="ITM2B" FT /locus_tag="RP11-196P14.1-001" FT /product="integral membrane protein 2B" FT /note="match: ESTs: Em:CA310185.1 Em:CA415183.1" FT /note="match: cDNAs: Em:AF152462.1 Em:BC016148.1 FT Em:BC018053.1" FT mRNA join(48807339..48807613,48827944..48828072, FT 48832933..48833083,48835275..48835524) FT /gene="ITM2B" FT /locus_tag="RP11-196P14.1-003" FT /product="integral membrane protein 2B" FT /note="match: ESTs: Em:BG713969" FT CDS join(48807497..48807613,48827944..48828072, FT 48830313..48830519,48832262..48832372,48832933..48833083, FT 48835275..48835360) FT /gene="ITM2B" FT /locus_tag="RP11-196P14.1-001" FT /standard_name="OTTHUMP00000018394" FT /product="integral membrane protein 2B" FT /note="match: proteins: Sw:O89051.1 Sw:Q5R876.1 Sw:Q5XIE8.1 FT Sw:Q60HC1.1 Sw:Q9Y287.1 Tr:Q5W0A3.1 Tr:Q96B24.1 FT Tr:Q9NX12.1" FT /protein_id="CAH71156.1" FT /translation="MVKVTFNSALAQKEAKKDEPKSGEEALIIPPDAVAVDCKDPDDVV FT PVGQRRAWCWCMCFGLAFMLAGVILGGAYLYKYFALQPDDVYYCGIKYIKDDVILNEPS FT ADAPAALYQTIEENIKIFEEEEVEFISVPVPEFADSDPANIVHDFNKKLTAYLDLNLDK FT CYVIPLNTSIVMPPRNLLELLINIKAGTYLPQSYLIHEHMVITDRIENIDHLGFFIYRL FT CHDKETYKLQRRETIKGIQKREASNCFAIRHFENKFAVETLICS" FT CDS join(48807497..48807613,48827944..48828072, FT 48832933..48833083,48835275..48835360) FT /gene="ITM2B" FT /locus_tag="RP11-196P14.1-003" FT /standard_name="OTTHUMP00000018395" FT /product="integral membrane protein 2B" FT /protein_id="CAH71157.1" FT /translation="MVKVTFNSALAQKEAKKDEPKSGEEALIIPPDAVAVDCKDPDDVV FT PVGQRRAWCWCMCFGLAFMLAGVILGGAYLYKYFALQAGTYLPQSYLIHEHMVITDRIE FT NIDHLGFFIYRLCHDKETYKLQRRETIKGIQKREASNCFAIRHFENKFAVETLICS" FT mRNA join(48835273..48835457,48836707..48837063) FT /gene="ITM2B" FT /locus_tag="RP11-196P14.1-002" FT /product="integral membrane protein 2B" FT /note="match: ESTs: Em:AW951472" FT polyA_signal 48835504..48835509 FT polyA_site 48835524 FT polyA_signal 48835983..48835988 FT polyA_site 48836006 FT polyA_signal 48836155..48836160 FT polyA_signal 48836204..48836209 FT polyA_site 48836227 FT misc_feature 48862578 FT /note="Clone_right_end: RP11-196P14" FT misc_feature 48862679..48999920 FT /note="annotated region of clone" FT mRNA complement(join(48985275..48987247,48989836..48989946, FT 48991303..48991456,48996786..48996926, FT AL136960.4:1175..1223)) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-001" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /note="match: cDNAs: Em:AK122856.1" FT mRNA complement(join(48870963..48871266,48876475..48876628, FT 48877427..48877797)) FT /locus_tag="RP11-305D15.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BQ049972" FT mRNA complement(join(48876583..48876628,48877622..48877795)) FT /locus_tag="RP11-305D15.2-002" FT /product="novel transcript" FT /note="match: ESTs: Em:N46751" FT mRNA join(48877911..48878185,48881416..48881542, FT 48916735..48916850,48919216..48919335,48921961..48921999, FT 48923092..48923159,48934153..48934263,48936951..48937093, FT 48939030..48939107,48941630..48941739,48942663..48942740, FT 48947541..48947628,48951054..48951170,48953730..48953786, FT 48954189..48954220,48954301..48954377,48955383..48955579, FT AL136960.4:27309..27427,AL136960.4:30520..30665, FT AL136960.4:34004..34149,AL136960.4:38047..38151, FT AL136960.4:39314..39427,AL136960.4:39521..39684, FT AL136960.4:47676..47706,AL136960.4:51017..51159, FT AL136960.4:51671..51720,AL136960.4:54314..56302) FT /gene="RB1" FT /locus_tag="RP11-174I10.1-002" FT /product="retinoblastoma 1 (including osteosarcoma)" FT /note="match: cDNAs: Em:AF102861 Em:AF230742 Em:AK011246 FT Em:D25233 Em:L07126 Em:L41870 Em:M15400 Em:M26391 Em:M28419 FT Em:M33647 Em:U00113 Em:X72218" FT /note="match: ESTs: Em:AA361277 Em:AA396353 Em:AA763411 FT Em:AA763485 Em:AA955457 Em:AA959709 Em:AA959836 Em:AI074792 FT Em:AI539104 Em:AI573047 Em:AI606529 Em:AI646038 Em:AI646097 FT Em:AI765958 Em:AL120941 Em:AL563757 Em:AL597811 Em:AL599105 FT Em:AL599633 Em:AV715533 Em:AW368234 Em:AW503514 Em:AW535121 FT Em:AW583181 Em:BE082846 Em:BE168095 Em:BE168914 Em:BE463663 FT Em:BE692220 Em:BE931236 Em:BF804092 Em:BF827047 Em:BF998374 FT Em:BF998390 Em:BG253543 Em:BG570456 Em:BI460361 Em:BI462710 FT Em:BI553937 Em:BI562738 Em:BM450031 Em:BM453724 Em:BM471037 FT Em:BM475603 Em:BM561083 Em:BM802736 Em:BQ021681 Em:BQ220275 FT Em:BQ222227 Em:BQ439221" FT mRNA join(48877911..48878185,48934153..48934263, FT 48936951..48937044) FT /gene="RB1" FT /locus_tag="RP11-174I10.1-003" FT /product="retinoblastoma 1 (including osteosarcoma)" FT /note="match: cDNAs: Em:M19701" FT CDS join(48878049..48878185,48881416..48881542, FT 48916735..48916850,48919216..48919335,48921961..48921999, FT 48923092..48923159,48934153..48934263,48936951..48937093, FT 48939030..48939107,48941630..48941739,48942663..48942740, FT 48947541..48947628,48951054..48951170,48953730..48953786, FT 48954189..48954220,48954301..48954377,48955383..48955579, FT AL136960.4:27309..27427,AL136960.4:30520..30665, FT AL136960.4:34004..34149,AL136960.4:38047..38151, FT AL136960.4:39314..39427,AL136960.4:39521..39684, FT AL136960.4:47676..47706,AL136960.4:51017..51159, FT AL136960.4:51671..51720,AL136960.4:54314..54387) FT /gene="RB1" FT /locus_tag="RP11-174I10.1-002" FT /standard_name="OTTHUMP00000018397" FT /product="retinoblastoma 1 (including osteosarcoma)" FT /note="match: proteins: Sw:P06400 Sw:P13405 Sw:P33568 FT Tr:Q90600 Tr:Q91016 Tr:Q98966 Tr:Q98SK2 Tr:Q9BDQ3 Tr:Q9CT40 FT Tr:Q9N122 Tr:Q9PSL2 Tr:Q9YGE5" FT /protein_id="CAH72243.1" FT /translation="MPPKTPRKTAATAAAAAAEPPAPPPPPPPEEDPEQDSGPEDLPLV FT RLEFEETEEPDFTALCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIF FT IAAVDLDEMSFTFTELQKNIEISVHKFFNLLKEIDTSTKVDNAMSRLLKKYDVLFALFS FT KLERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCV FT LDYFIKLSPPMLLKEPYKTAVIPINGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEH FT ECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVENLSKRYEEIYLKNKDLDARLFLDHD FT KTLQTDSIDSFETQRTPRKSNLDEEVNVIPPHTPVRTVMNTIQQLMMILNSASDQPSEN FT LISYFNNCTVNPKESILKRVKDIGYIFKEKFAKAVGQGCVEIGSQRYKLGVRLYYRVME FT SMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWI FT LNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQS FT KDREGPTDHLESACPLNLPLQNNHTAADMYLSPVRSPKKKGSTTRVNSTANAETQATSA FT FQTQKPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYEL FT MRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSII FT VFYNSVFMQRLKTNILQYASTRPPTLSPIPHIPRSPYKFPSSPLRIPGGNIYISPLKSP FT YKISEGLPTPTKMTPRSRILVSIGESFGTSEKFQKINQMVCNSDRVLKRSAEGSNPPKP FT LKKLRFDIEGSDEADGSKHLPGESKFQQKLAEMTSTRTRMQKQKMNDSMDTSNKEEK" FT mRNA complement(join(48985274..48987247,48989836..48989946, FT 48990449..48990700,48991303..48991456,48996786..48996926, FT 48998129..48998255,AL136960.4:18869..19020)) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-003" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /note="match: cDNAs: Em:BC045651.1" FT /note="match: ESTs: Em:AI379745.1 Em:AI379767.1 FT Em:BM150492.1 Em:BQ006077.1" FT mRNA complement(join(48996783..48996925,48998128..48998255, FT AL136960.4:896..1111,AL136960.4:13925..14128, FT AL136960.4:18869..18982)) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-004" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /note="match: ESTs: Em:BI463772.1 Em:BI464509.1" FT CDS complement(48890999..48894611) FT /pseudo FT /locus_tag="RP11-305D15.6-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q8WVV0 Tr:Q9Y4D3" FT misc_feature 48895392..48895436 FT /note="Sequence confirmed by L11910 sequenced by the FT Hospital for Sick Children, Toronto, Canada" FT misc_feature 48896466 FT /note="Clone_left_end: RP11-174I10" FT polyA_signal complement(48900528..48900533) FT CDS complement(48902220..48902700) FT /pseudo FT /locus_tag="RP11-305D15.5-001" FT /product="PEST-containing nuclear protein (PCNP) FT pseudogene" FT /note="match: proteins: Sw:Q8WW12 Sw:Q8WW12 Sw:Q8WW12" FT mRNA complement(join(48963707..48963948,48965536..48965667)) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-008" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /note="match: ESTs: Em:AA883335.1 Em:BG203127.1" FT mRNA complement(join(48963707..48963948,48978317..48978399, FT 48980692..48980845)) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-007" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /note="match: ESTs: Em:AW182595.1" FT polyA_site complement(48985181) FT polyA_signal complement(48985198..48985203) FT polyA_site complement(48985274) FT polyA_signal complement(48985292..48985297) FT CDS complement(48985525..48986559) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-001" FT /standard_name="OTTHUMP00000018396" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /protein_id="CAH72247.1" FT /translation="MVSVNSSHCFYNDSFKYTLYGCMFSMVFVLGLISNCVAIYIFICV FT LKVRNETTTYMINLAMSDLLFVFTLPFRIFYFTTRNWPFGDLLCKISVMLFYTNMYGSI FT LFLTCISVDRFLAIVYPFKSKTLRTKRNAKIVCTGVWLTVIGGSAPAVFVQSTHSQGNN FT ASEACFENFPEATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMVLKTLTKPVTLSRSKI FT NKTKVLKMIFVHLIIFCFCFVPYNINLILYSLVRTQTFVNCSVVAAVRTMYPITLCIAV FT SNCCFDPIVYYFTSDTIQNSIKMKNWSVRRSDFRFSEVHGAENFIQHNLQTLKSKIFDN FT ESAA" FT mRNA complement(join(48985877..48986341,48986557..48986625)) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-002" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /note="match: ESTs: Em:AW195813" FT mRNA complement(join(48963707..48963948,48978317..48978399, FT 48989836..48989952)) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-005" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /note="match: ESTs: Em:AA812590.1" FT mRNA complement(join(48963707..48963948,48989836..48989949)) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-006" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /note="match: ESTs: Em:AI024338.1" FT misc_feature 48999820 FT /note="Clone_right_end: RP11-305D15" FT misc_feature 48999921..49062645 FT /note="annotated region of clone" FT mRNA complement(join(AL392048.9:122697..124669, FT AL392048.9:127258..127368,AL392048.9:128725..128878, FT AL392048.9:134208..134348,49000995..49001043)) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-001" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /note="match: cDNAs: Em:AK122856.1" FT misc_feature 49001489..49001868 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC FT clone.Restriction digest data confirm the assembly" FT mRNA join(AL392048.9:15333..15607,AL392048.9:18838..18964, FT AL392048.9:54157..54272,AL392048.9:56638..56757, FT AL392048.9:59383..59421,AL392048.9:60514..60581, FT AL392048.9:71575..71685,AL392048.9:74373..74515, FT AL392048.9:76452..76529,AL392048.9:79052..79161, FT AL392048.9:80085..80162,AL392048.9:84963..85050, FT AL392048.9:88476..88592,AL392048.9:91152..91208, FT AL392048.9:91611..91642,AL392048.9:91723..91799, FT AL392048.9:92805..93001,49027129..49027247, FT 49030340..49030485,49033824..49033969,49037867..49037971, FT 49039134..49039247,49039341..49039504,49047496..49047526, FT 49050837..49050979,49051491..49051540,49054134..49056122) FT /gene="RB1" FT /locus_tag="RP11-174I10.1-002" FT /product="retinoblastoma 1 (including osteosarcoma)" FT /note="match: cDNAs: Em:AF102861 Em:AF230742 Em:AK011246 FT Em:D25233 Em:L07126 Em:L41870 Em:M15400 Em:M26391 Em:M28419 FT Em:M33647 Em:U00113 Em:X72218" FT /note="match: ESTs: Em:AA361277 Em:AA396353 Em:AA763411 FT Em:AA763485 Em:AA955457 Em:AA959709 Em:AA959836 Em:AI074792 FT Em:AI539104 Em:AI573047 Em:AI606529 Em:AI646038 Em:AI646097 FT Em:AI765958 Em:AL120941 Em:AL563757 Em:AL597811 Em:AL599105 FT Em:AL599633 Em:AV715533 Em:AW368234 Em:AW503514 Em:AW535121 FT Em:AW583181 Em:BE082846 Em:BE168095 Em:BE168914 Em:BE463663 FT Em:BE692220 Em:BE931236 Em:BF804092 Em:BF827047 Em:BF998374 FT Em:BF998390 Em:BG253543 Em:BG570456 Em:BI460361 Em:BI462710 FT Em:BI553937 Em:BI562738 Em:BM450031 Em:BM453724 Em:BM471037 FT Em:BM475603 Em:BM561083 Em:BM802736 Em:BQ021681 Em:BQ220275 FT Em:BQ222227 Em:BQ439221" FT CDS join(AL392048.9:15471..15607,AL392048.9:18838..18964, FT AL392048.9:54157..54272,AL392048.9:56638..56757, FT AL392048.9:59383..59421,AL392048.9:60514..60581, FT AL392048.9:71575..71685,AL392048.9:74373..74515, FT AL392048.9:76452..76529,AL392048.9:79052..79161, FT AL392048.9:80085..80162,AL392048.9:84963..85050, FT AL392048.9:88476..88592,AL392048.9:91152..91208, FT AL392048.9:91611..91642,AL392048.9:91723..91799, FT AL392048.9:92805..93001,49027129..49027247, FT 49030340..49030485,49033824..49033969,49037867..49037971, FT 49039134..49039247,49039341..49039504,49047496..49047526, FT 49050837..49050979,49051491..49051540,49054134..49054207) FT /gene="RB1" FT /locus_tag="RP11-174I10.1-002" FT /standard_name="OTTHUMP00000018397" FT /product="retinoblastoma 1 (including osteosarcoma)" FT /note="match: proteins: Sw:P06400 Sw:P13405 Sw:P33568 FT Tr:Q90600 Tr:Q91016 Tr:Q98966 Tr:Q98SK2 Tr:Q9BDQ3 Tr:Q9CT40 FT Tr:Q9N122 Tr:Q9PSL2 Tr:Q9YGE5" FT /protein_id="CAH70901.1" FT /translation="MPPKTPRKTAATAAAAAAEPPAPPPPPPPEEDPEQDSGPEDLPLV FT RLEFEETEEPDFTALCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIF FT IAAVDLDEMSFTFTELQKNIEISVHKFFNLLKEIDTSTKVDNAMSRLLKKYDVLFALFS FT KLERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCV FT LDYFIKLSPPMLLKEPYKTAVIPINGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEH FT ECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVENLSKRYEEIYLKNKDLDARLFLDHD FT KTLQTDSIDSFETQRTPRKSNLDEEVNVIPPHTPVRTVMNTIQQLMMILNSASDQPSEN FT LISYFNNCTVNPKESILKRVKDIGYIFKEKFAKAVGQGCVEIGSQRYKLGVRLYYRVME FT SMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWI FT LNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQS FT KDREGPTDHLESACPLNLPLQNNHTAADMYLSPVRSPKKKGSTTRVNSTANAETQATSA FT FQTQKPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYEL FT MRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSII FT VFYNSVFMQRLKTNILQYASTRPPTLSPIPHIPRSPYKFPSSPLRIPGGNIYISPLKSP FT YKISEGLPTPTKMTPRSRILVSIGESFGTSEKFQKINQMVCNSDRVLKRSAEGSNPPKP FT LKKLRFDIEGSDEADGSKHLPGESKFQQKLAEMTSTRTRMQKQKMNDSMDTSNKEEK" FT mRNA complement(join(AL392048.9:122696..124669, FT AL392048.9:127258..127368,AL392048.9:127871..128122, FT AL392048.9:128725..128878,AL392048.9:134208..134348, FT AL392048.9:135551..135677,49018689..49018840)) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-003" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /note="match: cDNAs: Em:BC045651.1" FT /note="match: ESTs: Em:AI379745.1 Em:AI379767.1 FT Em:BM150492.1 Em:BQ006077.1" FT mRNA complement(join(AL392048.9:134205..134347, FT AL392048.9:135550..135677,49000716..49000931, FT 49013745..49013948,49018689..49018802)) FT /gene="P2RY5" FT /locus_tag="RP11-305D15.7-004" FT /product="purinergic receptor P2Y, G-protein coupled, 5" FT /note="match: ESTs: Em:BI463772.1 Em:BI464509.1" FT mRNA join(49018964..49019357,49027129..49027247, FT 49030340..49030443) FT /gene="RB1" FT /locus_tag="RP11-174I10.1-004" FT /product="retinoblastoma 1 (including osteosarcoma)" FT /note="match: ESTs: Em:BI462710" FT misc_feature 49034397..49034717 FT /note="Sequence confirmed by L11910 sequenced by WIBR" FT mRNA join(49050583..49050979,49051491..49051540, FT 49054134..49054783) FT /gene="RB1" FT /locus_tag="RP11-174I10.1-001" FT /product="retinoblastoma 1 (including osteosarcoma)" FT /note="match: ESTs: Em:AL598766 Em:AV713264 Em:AV713450 FT Em:AV722384 Em:BG622940 Em:BI769614 Em:BI821116 Em:BM264312 FT Em:BM545881 Em:N41391" FT polyA_signal 49056001..49056006 FT polyA_site 49056026 FT misc_feature 49062446 FT /note="Clone_left_end: RP11-165D7" FT misc_feature 49062646..49177064 FT /note="annotated region of clone" FT polyA_site complement(49063095) FT polyA_signal complement(49063122..49063127) FT misc_feature 49065957 FT /note="Clone_right_end: RP11-174I10" FT mRNA complement(join(49064033..49064387,49065788..49065851, FT 49066576..49066709)) FT /gene="RCBTB2" FT /locus_tag="RP11-165D7.1-003" FT /product="regulator of chromosome condensation (RCC1) and FT BTB (POZ) domain containing protein 2" FT /note="match: ESTs: Em:BI438387" FT misc_feature 49077068..49077095 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS complement(join(49064247..49064387,49070327..49070457, FT 49073757..49073896,49075878..49076004,49076860..49077050, FT 49084765..49084907,49085906..49086013,49086152..49086310, FT 49086865..49087031,49089341..49089491,49089722..49089877, FT 49096034..49096075)) FT /gene="RCBTB2" FT /locus_tag="RP11-165D7.1-001" FT /standard_name="OTTHUMP00000018399" FT /product="regulator of chromosome condensation (RCC1) and FT BTB (POZ) domain containing protein 2" FT /note="match: proteins: Sw:O95199.1 Sw:Q5RCZ7.1 Sw:Q6P798.1 FT Sw:Q99LJ7.1" FT /protein_id="CAH70795.1" FT /translation="MEEELPLFSGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLI FT RQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLS FT YGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH FT SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD FT TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW FT GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQ FT SVILPHLTHFSCTDDVFACFATPAVTWRLLSVEPDDHLTVAESLKREFDNPDTADLKFL FT VDGKYIYAHKVLLKIRCEHFRSSLEDNEDDIVEMSEFSYPVYRAFLEYLYTDSISLSPE FT EAVGLLDLATFYRENRLKKLCQQTIKQGICEENAIALLSAAVKYDAQDLEEFCFRFCIN FT HLTVVTQTSGFAEMDHDLLKNFISKASRVGAFKN" FT mRNA complement(join(49063095..49064387,49070327..49070457, FT 49073757..49073896,49075878..49076004,49076860..49077050, FT 49084765..49084907,49085906..49086013,49086152..49086310, FT 49086865..49087031,49089341..49089491,49089722..49089877, FT 49096034..49096098,49096444..49096539,49098795..49098893, FT 49107164..49107369)) FT /gene="RCBTB2" FT /locus_tag="RP11-165D7.1-001" FT /product="regulator of chromosome condensation (RCC1) and FT BTB (POZ) domain containing protein 2" FT /note="match: ESTs: Em:AI921988.1 Em:BM681889.1 FT Em:CA447434.1 Em:DA779870.1" FT /note="match: cDNAs: Em:AF060219.1 Em:AK023010.1 FT Em:BC029052.1" FT mRNA complement(join(49086268..49086310,49086865..49087031, FT 49089341..49089491,49089722..49089877,49107164..49107316)) FT /gene="RCBTB2" FT /locus_tag="RP11-165D7.1-002" FT /product="regulator of chromosome condensation (RCC1) and FT BTB (POZ) domain containing protein 2" FT /note="match: ESTs: Em:BI754136 Em:BI754283" FT mRNA complement(join(49144775..49144977,49147244..49147453)) FT /locus_tag="RP11-165D7.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI769787" FT mRNA complement(join(49151110..49151995,49152149..49152224)) FT /locus_tag="RP11-165D7.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI307356 Em:AI762913 Em:AI767356 FT Em:AI796352 Em:AW469968 Em:BM472085" FT misc_feature 49176865 FT /note="Clone_left_end: RP11-108P5" FT misc_feature 49177065..49339410 FT /note="annotated region of clone" FT misc_feature 49201701..49202428 FT /note="Sequence from overlapping clone AL157813.Assembly FT confirmed by restriction digest" FT misc_feature 49219341 FT /note="Clone_right_end: RP11-165D7" FT misc_feature 49228344..49228345 FT /note="Single clone region. Sequence from clone PCR only" FT mRNA 49280691..49283498 FT /gene="CYSLTR2" FT /locus_tag="RP11-108P5.1-001" FT /product="cysteinyl leukotriene receptor 2" FT /note="match: cDNAs: Em:AB038269.1 Em:AB041947.1 FT Em:BC069160.1" FT CDS 49280954..49281994 FT /gene="CYSLTR2" FT /locus_tag="RP11-108P5.1-001" FT /standard_name="OTTHUMP00000018401" FT /product="cysteinyl leukotriene receptor 2" FT /note="match: proteins: Sw:Q9NS75.1 Tr:Q5KU17.1" FT /protein_id="CAC29102.1" FT /translation="MERKFMSLQPSISVSEMEPNGTFSNNNSRNCTIENFKREFFPIVY FT LIIFFWGVLGNGLSIYVFLQPYKKSTSVNVFMLNLAISDLLFISTLPFRADYYLRGSNW FT IFGDLACRIMSYSLYVNMYSSIYFLTVLSVVRFLAMVHPFRLLHVTSIRSAWILCGIIW FT ILIMASSIMLLDSGSEQNGSVTSCLELNLYKIAKLQTMNYIALVVGCLLPFFTLSICYL FT LIIRVLLKVEVPESGLRVSHRKALTTIIITLIIFFLCFLPYHTLRTVHLTTWKVGLCKD FT RLHKALVITLALAAANACFNPLLYYFAGENFKDRLKSALRKGHPQKAKTKCVFPVSVWL FT RKETRV" FT misc_feature 49283853 FT /note="Clone_left_end: RP11-278A16" FT misc_feature 49339310 FT /note="Clone_right_end: RP11-108P5" FT misc_feature 49339411..49470517 FT /note="annotated region of clone" FT CDS 49345264..49345963 FT /pseudo FT /locus_tag="RP11-278A16.1-001" FT /product="proteasome (prosome, macropain) activator subunit FT 2 (PA28 beta) (PSME2) pseudogene" FT /note="match: proteins: Sw:P97372 Sw:Q63798 Sw:Q9UL46 FT Sw:Q9UL46 Tr:Q9PUC4" FT polyA_signal 49345984..49345989 FT misc_feature 49421444..49421638 FT /note="Tandem repeat. Tandem repeat contains forced join FT and single clone of 13cyi58f4. Assembly is consistent with FT restriction digest" FT misc_feature 49444874..49444920 FT /note="Single clone region. Region contains reads from FT clone pcr only (oligos 5 & 6). Assembly is consistent with FT restriction digest" FT misc_feature 49472517 FT /note="Clone_right_end: RP11-278A16" FT misc_feature 49474863 FT /note="Clone_left_end: RP11-156K23" FT misc_feature 49476863..49626307 FT /note="annotated region of clone" FT misc_feature 49483288 FT /note="Clone_left_end: RP11-354C11" FT misc_feature 49504320 FT /note="Clone_right_end: RP11-380A6" FT mRNA join(49550205..49550313,49580288..49580425, FT AL359184.11:23218..23293,AL137000.6:38665..38741, FT AL137000.6:55147..55384,AL137000.6:60342..60611, FT AL137000.6:62757..62815,AL137000.6:69788..70857) FT /gene="FNDC3A" FT /locus_tag="RP11-203I16.5-001" FT /product="fibronectin type III domain containing 3A" FT /note="match: cDNAs: Em:AK056071" FT /note="match: ESTs: Em:AA452239 Em:AA771682 Em:AI262173 FT Em:AI469041 Em:AI527798 Em:AI768463 Em:AI925886 Em:AL705287 FT Em:AL707519 Em:AV683287 Em:AV762089 Em:AW005927 Em:AW080585 FT Em:BB600478 Em:BE589982 Em:BE675600 Em:BF062416 Em:BF591883 FT Em:BF732244 Em:BG622338 Em:BI046051 Em:BI335248 FT Em:BM470537" FT CDS join(49580327..49580425,AL359184.11:23218..23293, FT AL137000.6:38665..38741,AL137000.6:55147..55384, FT AL137000.6:60342..60611,AL137000.6:62757..62815, FT AL137000.6:69788..69949) FT /gene="FNDC3A" FT /locus_tag="RP11-203I16.5-001" FT /standard_name="OTTHUMP00000018403" FT /product="fibronectin type III domain containing 3A" FT /note="match: proteins: Tr:Q96N25" FT /protein_id="CAH70653.1" FT /translation="MAEHPPLLDTTQILSSDISLLSAPIVSADGTQQVILVQVNPGEAF FT TIRREDGQFQCITGPAQVPMMSPNGSVPPIYVPPGYAPQVIEDNGVRRVVVVPQAPEFH FT PGSHTVLHRSPHPPLPGFIPVPTMMPPPPRHMYSPVTGAGDMTTQYMPQYQSSQVYGDV FT DAHSTHGRSNFRDERSSKTYERLQKKLKDRQGTQKDKMSSPPSSPQKCPSPINEHNGLI FT KGQIAGGINTGSAKIKSGKGKGGTQVDTEIEEKDEETKAFEALLSNIVKPVASDIQART FT VVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYV" FT CDS complement(join(49618215..49618518,49618821..49619154, FT 49619592..49620930)) FT /pseudo FT /locus_tag="RP11-156K23.2-001" FT /product="RAD17 homolog (S. pombe) pseudogene" FT /note="match: proteins: Sw:O75943 Sw:O75943 Sw:O75943 FT Sw:O75943 Sw:Q9XT62" FT misc_feature 49624307 FT /note="Clone_right_end: RP11-156K23" FT misc_feature 49626308..49650226 FT /note="annotated region of clone" FT misc_feature 49635448..49635662 FT /note="Tandem repeat. Single clone region. Assembly FT confirmed by restriction digest data. Single read sequenced FT with dGTP big dye terminator chemistry" FT misc_feature 49650027 FT /note="Clone_left_end: RP11-203I16" FT mRNA join(AL161421.11:75343..75451,AL161421.11:105426..105563, FT 49649425..49649500,AL137000.6:38665..38741, FT AL137000.6:55147..55384,AL137000.6:60342..60611, FT AL137000.6:62757..62815,AL137000.6:69788..70857) FT /gene="FNDC3A" FT /locus_tag="RP11-203I16.5-001" FT /product="fibronectin type III domain containing 3A" FT /note="match: cDNAs: Em:AK056071" FT /note="match: ESTs: Em:AA452239 Em:AA771682 Em:AI262173 FT Em:AI469041 Em:AI527798 Em:AI768463 Em:AI925886 Em:AL705287 FT Em:AL707519 Em:AV683287 Em:AV762089 Em:AW005927 Em:AW080585 FT Em:BB600478 Em:BE589982 Em:BE675600 Em:BF062416 Em:BF591883 FT Em:BF732244 Em:BG622338 Em:BI046051 Em:BI335248 FT Em:BM470537" FT CDS join(AL161421.11:105465..105563,49649425..49649500, FT AL137000.6:38665..38741,AL137000.6:55147..55384, FT AL137000.6:60342..60611,AL137000.6:62757..62815, FT AL137000.6:69788..69949) FT /gene="FNDC3A" FT /locus_tag="RP11-203I16.5-001" FT /standard_name="OTTHUMP00000018403" FT /product="fibronectin type III domain containing 3A" FT /note="match: proteins: Tr:Q96N25" FT /protein_id="CAH73933.1" FT /translation="MAEHPPLLDTTQILSSDISLLSAPIVSADGTQQVILVQVNPGEAF FT TIRREDGQFQCITGPAQVPMMSPNGSVPPIYVPPGYAPQVIEDNGVRRVVVVPQAPEFH FT PGSHTVLHRSPHPPLPGFIPVPTMMPPPPRHMYSPVTGAGDMTTQYMPQYQSSQVYGDV FT DAHSTHGRSNFRDERSSKTYERLQKKLKDRQGTQKDKMSSPPSSPQKCPSPINEHNGLI FT KGQIAGGINTGSAKIKSGKGKGGTQVDTEIEEKDEETKAFEALLSNIVKPVASDIQART FT VVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYV" FT misc_feature 49650227..49813410 FT /note="annotated region of clone" FT mRNA join(49684449..49684542,49688791..49688867, FT 49705273..49705510,49710468..49710737,49712883..49712941, FT 49719914..49720071,49741380..49741439,49742749..49742887, FT 49746179..49746232,49748571..49748695,49749503..49749677, FT 49752704..49752790,49760100..49760238,49761258..49761326, FT 49762651..49762769,49765151..49765256,49765345..49765520, FT 49771013..49771126,49771861..49772010,49772118..49772401, FT 49772498..49772710,49775936..49776102,49777293..49777420, FT 49781217..49783729) FT /gene="FNDC3A" FT /locus_tag="RP11-203I16.5-002" FT /product="fibronectin type III domain containing 3A" FT /note="match: ESTs: Em:AA187638.1 Em:AI268071.1 FT Em:BM973827.1 Em:R43578.1" FT /note="match: cDNAs: Em:AB023187.2 Em:AJ749707.1 FT Em:BX640739.1 Em:CR858607.1" FT CDS join(49684536..49684542,49688791..49688867, FT 49705273..49705510,49710468..49710737,49712883..49712941, FT 49719914..49720071,49741380..49741439,49742749..49742887, FT 49746179..49746232,49748571..49748695,49749503..49749677, FT 49752704..49752790,49760100..49760238,49761258..49761326, FT 49762651..49762769,49765151..49765256,49765345..49765520, FT 49771013..49771126,49771861..49772010,49772118..49772401, FT 49772498..49772710,49775936..49776102,49777293..49777420, FT 49781217..49781531) FT /gene="FNDC3A" FT /locus_tag="RP11-203I16.5-002" FT /standard_name="OTTHUMP00000018404" FT /product="fibronectin type III domain containing 3A" FT /note="match: proteins: Sw:Q8BX90.2 Sw:Q9Y2H6.3 FT Tr:Q5RBN1.1" FT /protein_id="CAI39726.2" FT /translation="MSGPAQVPMMSPNGSVPPIYVPPGYAPQVIEDNGVRRVVVVPQAP FT EFHPGSHTVLHRSPHPPLPGFIPVPTMMPPPPRHMYSPVTGAGDMTTQYMPQYQSSQVY FT GDVDAHSTHGRSNFRDERSSKTYERLQKKLKDRQGTQKDKMSSPPSSPQKCPSPINEHN FT GLIKGQIAGGINTGSAKIKSGKGKGGTQVDTEIEEKDEETKAFEALLSNIVKPVASDIQ FT ARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDL FT KPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSD FT NGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFS FT EEVLYYTSGCAPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGF FT KPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDKPGIPVKPSVK FT GKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGC FT FYRLRVYCISDGGQSAVSESLLVQTPAVPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGG FT SPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKC FT DITTAPGPPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG FT PGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSVPGIVTCLQEISDDEIE FT NPHYSPSTCLAISWEKPCDHGSEILAYSIDFGDKQSLTVGKVTSYIINNLQPDTTYRIR FT IQALNSLGAGPFSHMIKLKTKPLPPDPPRLECVAFSHQNLKLKWGEGTPKTLSTDSIQY FT HLQMEDKNGRFVSLYRGPCHTYKVQRLNESTSYKFCIQACNEAGEGPLSQEYIFTTPKS FT VPAALKAPKIEKVNDHICEITWECLQPMKGDPVIYSLQVMLGKDSEFKQIYKGPDSSFR FT YSSLQLNCEYRFRVCAIRQCQDSLGHQDLVGPYSTTVLFISQRTEPPASTNRDTVESTR FT TRRALSDEQCAAVILVLFAFFSILIAFIIQYFVIK" FT mRNA join(AL161421.11:75343..75451,AL161421.11:105426..105563, FT AL359184.11:23218..23293,49688791..49688867, FT 49705273..49705510,49710468..49710737,49712883..49712941, FT 49719914..49720983) FT /gene="FNDC3A" FT /locus_tag="RP11-203I16.5-001" FT /product="fibronectin type III domain containing 3A" FT /note="match: ESTs: Em:AA452239 Em:AA771682 Em:AI262173 FT Em:AI469041 Em:AI527798 Em:AI768463 Em:AI925886 Em:AL705287 FT Em:AL707519 Em:AV683287 Em:AV762089 Em:AW005927 Em:AW080585 FT Em:BB600478 Em:BE589982 Em:BE675600 Em:BF062416 Em:BF591883 FT Em:BF732244 Em:BG622338 Em:BI046051 Em:BI335248 FT Em:BM470537" FT /note="match: cDNAs: Em:AK056071" FT CDS join(AL161421.11:105465..105563,AL359184.11:23218..23293, FT 49688791..49688867,49705273..49705510,49710468..49710737, FT 49712883..49712941,49719914..49720075) FT /gene="FNDC3A" FT /locus_tag="RP11-203I16.5-001" FT /standard_name="OTTHUMP00000018403" FT /product="fibronectin type III domain containing 3A" FT /note="match: proteins: Tr:Q96N25" FT /protein_id="CAI39727.1" FT /translation="MAEHPPLLDTTQILSSDISLLSAPIVSADGTQQVILVQVNPGEAF FT TIRREDGQFQCITGPAQVPMMSPNGSVPPIYVPPGYAPQVIEDNGVRRVVVVPQAPEFH FT PGSHTVLHRSPHPPLPGFIPVPTMMPPPPRHMYSPVTGAGDMTTQYMPQYQSSQVYGDV FT DAHSTHGRSNFRDERSSKTYERLQKKLKDRQGTQKDKMSSPPSSPQKCPSPINEHNGLI FT KGQIAGGINTGSAKIKSGKGKGGTQVDTEIEEKDEETKAFEALLSNIVKPVASDIQART FT VVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYV" FT polyA_signal complement(49761503..49761508) FT CDS complement(49761615..49761806) FT /pseudo FT /locus_tag="RP11-203I16.1-001" FT /product="cytochrome c oxidase subunit VIIc pseudogene 1" FT /note="match: proteins: Sw:P00430 Sw:P15954 Sw:P17665 FT Sw:P80334 Tr:O18687" FT polyA_signal 49783892..49783897 FT polyA_site 49783915 FT CDS complement(join(49784558..49785200,49785482..49786430)) FT /pseudo FT /locus_tag="RP11-203I16.3-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q9H7U5 Tr:Q9H9J9 Tr:Q9HA87 FT Tr:Q9HCG0 Tr:Q9NVB6" FT mRNA join(49794474..49795374,49796176..49796513) FT /gene="MLNR" FT /locus_tag="RP11-203I16.6-001" FT /product="motilin receptor" FT /note="match: cDNAs: Em:AY603964.1" FT CDS join(49794474..49795374,49796176..49796513) FT /gene="MLNR" FT /locus_tag="RP11-203I16.6-001" FT /standard_name="OTTHUMP00000018402" FT /product="motilin receptor" FT /note="match: proteins: Sw:O43193.1" FT /protein_id="CAC19107.1" FT /translation="MGSPWNGSDGPEGAREPPWPALPPCDERRCSPFPLGALVPVTAVC FT LCLFVVGVSGNVVTVMLIGRYRDMRTTTNLYLGSMAVSDLLILLGLPFDLYRLWRSRPW FT VFGPLLCRLSLYVGEGCTYATLLHMTALSVERYLAICRPLRARVLVTRRRVRALIAVLW FT AVALLSAGPFLFLVGVEQDPGISVVPGLNGTARIASSPLASSPPLWLSRAPPPSPPSGP FT ETAEAAALFSRECRPSPAQLGALRVMLWVTTAYFFLPFLCLSILYGLIGRELWSSRRPL FT RGPAASGRERGHRQTVRVLLVVVLAFIICWLPFHVGRIIYINTEDSRMMYFSQYFNIVA FT LQLFYLSASINPILYNLISKKYRAAAFKLLLARKSRPRGFHRSRDTAGEVAGDTGGDTV FT GYTETSANVKTMG" FT misc_feature 49813310 FT /note="Clone_right_end: RP11-103J18" FT misc_feature 49813411..49903117 FT /note="annotated region of clone" FT mRNA join(49822061..49822255,49823007..49823101, FT 49829975..49830049,49833482..49833659,49841626..49842195, FT 49848427..49848476,49852486..49852655,49854645..49854834, FT 49860358..49860418,49865820..49867618) FT /gene="CDADC1" FT /locus_tag="RP11-103J18.2-001" FT /product="cytidine and dCMP deaminase domain containing 1" FT /note="match: ESTs: Em:AA831293.1 Em:BM982419.1 FT Em:CA418624.1 Em:CA436992.1" FT /note="match: cDNAs: Em:AB169306.1 Em:AY027525.1 FT Em:BC022801.1 Em:CR858887.1" FT mRNA join(49822072..49822605,49823007..49823101, FT 49829975..49830051) FT /gene="CDADC1" FT /locus_tag="RP11-103J18.2-006" FT /product="cytidine and dCMP deaminase domain containing 1" FT /note="match: ESTs: Em:BG746379 Em:BM702195" FT mRNA join(49822077..49822255,49823007..49823101, FT 49829975..49830049,49833482..49833659,49840015..49840139, FT 49841626..49841661) FT /gene="CDADC1" FT /locus_tag="RP11-103J18.2-003" FT /product="cytidine and dCMP deaminase domain containing 1" FT /note="match: ESTs: Em:BI549617" FT mRNA join(49822083..49822255,49823007..49823101, FT 49829975..49830049,49833622..49833659,49841626..49841921) FT /gene="CDADC1" FT /locus_tag="RP11-103J18.2-002" FT /product="cytidine and dCMP deaminase domain containing 1" FT /note="match: cDNAs: Em:BC009562" FT mRNA join(49822113..49822255,49823007..49823101, FT 49829975..49830049,49833622..49833659,49840015..49840139, FT 49841626..49841793) FT /gene="CDADC1" FT /locus_tag="RP11-103J18.2-004" FT /product="cytidine and dCMP deaminase domain containing 1" FT /note="match: ESTs: Em:BG718057" FT CDS join(49822174..49822255,49823007..49823101, FT 49829975..49830049,49833482..49833659,49841626..49842195, FT 49848427..49848476,49852486..49852655,49854645..49854834, FT 49860358..49860418,49865820..49865893) FT /gene="CDADC1" FT /locus_tag="RP11-103J18.2-001" FT /standard_name="OTTHUMP00000018405" FT /product="cytidine and dCMP deaminase domain containing 1" FT /note="match: proteins: Sw:Q9BWV3.1" FT /protein_id="CAI10890.2" FT /translation="MKEAGQMQNLESARAGRSVSTQTGSMTGQIPRLSKVNLFTLLSLW FT MELFPAEAQRQKSQKNEEGKHGPLGDNEERTRVSTDKRQVKRTGLVVVKNMKIVGLHCS FT SEDLHAGQIALIKHGSRLKNCDLYFSRKPCSACLKMIVNAGVNRISYWPADPEISLLTE FT ASSSEDAKLDAKAVERLKSNSRAHVCVLLQPLVCYMVQFVEETSYKCDFIQKITKTLPD FT ANTDFYYECKQERIKEYEMLFLVSNEEMHKQILMTIGLENLCENPYFSNLRQNMKDLIL FT LLATVASSVPNFKHFGFYRSNPEQINEIHNQSLPQEIARHCMVQARLLAYRTEDHKTGV FT GAVIWAEGKSRSCDGTGAMYFVGCGYNAFPVGSEYADFPHMDDKQKDREIRKFRYIIHA FT EQNALTFRCQEIKPEERSMIFVTKCPCDECVPLIKGAGIKQIYAGDVDVGKKKADISYM FT RFGELEGVSKFTWQLNPSGAYGLEQNEPERRENGVLRPVPQKEEQHQDKKLRLGIH" FT mRNA join(<49822184..49822255,49823007..49823101, FT 49829975..49830049,49840015..>49840062) FT /gene="CDADC1" FT /locus_tag="RP11-103J18.2-005" FT /product="cytidine and dCMP deaminase domain containing 1" FT /note="match: ESTs: Em:AA354909" FT CDS join(<49822184..49822255,49823007..49823101, FT 49829975..49830049,49840015..>49840062) FT /codon_start=3 FT /gene="CDADC1" FT /locus_tag="RP11-103J18.2-005" FT /standard_name="OTTHUMP00000018409" FT /product="cytidine and dCMP deaminase domain containing 1" FT /protein_id="CAI10891.1" FT /translation="GQMQNLESARAGRSVSTQTGSMTGQIPRLSKVNLFTLLSLWMELF FT PAEAQRQKSQKNEEGKHGPLGDNEERTRVSTDKRQDYWKQLRCLDERFTIT" FT CDS complement(join(49884950..49885129,AL136218.26:3066..3209, FT AL136218.26:10796..10861,AL136218.26:15298..15357, FT AL136218.26:21863..21994)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-006" FT /standard_name="OTTHUMP00000205795" FT /product="calcium binding protein 39-like" FT /protein_id="CAX15158.1" FT /translation="MLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDAFATFKD FT LLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFAIMTKY FT ISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIEFLSS FT FQKERTDDEQFADEKNYLIKQIRDLKKTAP" FT mRNA complement(join(49884265..49885129,AL136218.26:3066..3209, FT AL136218.26:10796..10861,AL136218.26:15298..15357, FT AL136218.26:21863..22031,AL136218.26:22140..22246)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-006" FT /product="calcium binding protein 39-like" FT /note="match: cDNAs: Em:AK309011.1" FT /note="match: ESTs: Em:DA302531.1" FT polyA_signal 49841900..49841905 FT polyA_site 49841921 FT mRNA complement(join(49884758..49885129,AL136218.26:3066..3209, FT AL136218.26:10796..10861,AL136218.26:21863..22031, FT AL136218.26:30833..30951,AL136218.26:48086..>48250)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-002" FT /product="calcium binding protein 39-like" FT /note="match: cDNAs: Em:AK013161" FT CDS complement(join(49884950..49885129,AL136218.26:3066..3209, FT AL136218.26:10796..10861,AL136218.26:21863..22031, FT AL136218.26:30833..30951,AL136218.26:48086..>48250)) FT /codon_start=1 FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-002" FT /standard_name="OTTHUMP00000018411" FT /product="calcium binding protein 39-like" FT /protein_id="CAI10892.1" FT /translation="ASEEVSKSLQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLVTL FT IADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHPHILFMLLKGYEAPQIALR FT CGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDAFATFKIFEDYEKLLQSE FT NYVTKRQSLKLLGELILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKV FT FVASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKTAP" FT CDS complement(join(49884950..49885129,AL136218.26:3066..3209, FT AL136218.26:10796..10861,AL136218.26:15298..15357, FT AL136218.26:21863..22031,AL136218.26:30833..30951, FT AL136218.26:48086..48250,AL136218.26:53919..54029)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-005" FT /standard_name="OTTHUMP00000205794" FT /product="calcium binding protein 39-like" FT /protein_id="CAI10893.1" FT /translation="MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKS FT LQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNI FT LRRQIGTRSPTVEYISAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSN FT QFRDFFKYVELSTFDIASDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENY FT VTKRQSLKLLGELILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFV FT ASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKTAP" FT polyA_signal 49867599..49867604 FT polyA_site 49867621 FT polyA_site complement(49882786) FT polyA_signal complement(49882798..49882803) FT polyA_site complement(49883934) FT polyA_signal complement(49883954..49883959) FT mRNA complement(join(49882786..49885129,AL136218.26:3066..3209, FT AL136218.26:10796..10861,AL136218.26:15298..15357, FT AL136218.26:21863..22031,AL136218.26:30833..30951, FT AL136218.26:48086..48250,AL136218.26:53919..54060, FT AL136218.26:72252..72718)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-001" FT /product="calcium binding protein 39-like" FT /note="match: cDNAs: Em:AK022639.1 Em:BC010993.2" FT /note="match: ESTs: Em:AI095742.1 Em:AI252223.1 FT Em:AI341575.1 Em:AI375422.1 Em:AI807383.1 Em:AI906088.1 FT Em:AI956166.1 Em:AW264209.1 Em:BM976125.1 Em:BQ025082.1 FT Em:BU679452.1 Em:CA450475.1 Em:CN285067.1 Em:DB279812.1" FT misc_feature 49902918 FT /note="Clone_left_end: RP11-101D11" FT mRNA complement(join(49884788..49885129,AL136218.26:3066..3209, FT AL136218.26:10796..10861,AL136218.26:15298..15357, FT AL136218.26:21863..22031,AL136218.26:30833..30951, FT AL136218.26:48086..48250,AL136218.26:53919..54060, FT AL136218.26:72252..72389,AL136218.26:104437..104512, FT AL136218.26:105205..105342,AL136218.26:115105..115172)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-005" FT /product="calcium binding protein 39-like" FT /note="match: cDNAs: Em:AY288977.2" FT mRNA complement(join(49883934..49885129,AL136218.26:3066..3209, FT AL136218.26:10796..10861,AL136218.26:15298..15357, FT AL136218.26:21863..22031,AL136218.26:30833..30951, FT AL136218.26:48086..48250,AL136218.26:53919..54060, FT AL136218.26:104437..104512,AL136218.26:105205..105342, FT AL136218.26:115105..115245)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-003" FT /product="calcium binding protein 39-like" FT /note="match: cDNAs: Em:BX647518.1" FT /note="match: ESTs: Em:BF675983 Em:BG717488 Em:BG718664 FT Em:BI768822" FT misc_feature 49903118..50062880 FT /note="annotated region of clone" FT misc_feature 49920867 FT /note="Clone_right_end: RP11-103J18" FT CDS complement(join(AL138875.8:71640..71819,49906083..49906226, FT 49913813..49913878,49918315..49918374,49924880..49925011)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-006" FT /standard_name="OTTHUMP00000205795" FT /product="calcium binding protein 39-like" FT /protein_id="CAX15066.1" FT /translation="MLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDAFATFKD FT LLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFAIMTKY FT ISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIEFLSS FT FQKERTDDEQFADEKNYLIKQIRDLKKTAP" FT mRNA complement(join(AL138875.8:70955..71819,49906083..49906226, FT 49913813..49913878,49918315..49918374,49924880..49925048, FT 49925157..49925263)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-006" FT /product="calcium binding protein 39-like" FT /note="match: cDNAs: Em:AK309011.1" FT /note="match: ESTs: Em:DA302531.1" FT mRNA complement(join(AL138875.8:71448..71819,49906083..49906226, FT 49913813..49913878,49924880..49925048,49933850..49933968, FT 49951103..>49951267)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-002" FT /product="calcium binding protein 39-like" FT /note="match: cDNAs: Em:AK013161" FT CDS complement(join(AL138875.8:71640..71819,49906083..49906226, FT 49913813..49913878,49924880..49925048,49933850..49933968, FT 49951103..>49951267)) FT /codon_start=1 FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-002" FT /standard_name="OTTHUMP00000018411" FT /product="calcium binding protein 39-like" FT /protein_id="CAI10814.1" FT /translation="ASEEVSKSLQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLVTL FT IADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHPHILFMLLKGYEAPQIALR FT CGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDAFATFKIFEDYEKLLQSE FT NYVTKRQSLKLLGELILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKV FT FVASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKTAP" FT misc_feature 49952340..49952840 FT /note="Single clone region. Assembly is confirmed by FT restriction digest" FT CDS complement(join(<49924879..49925048,49933850..49933968, FT 49951103..49951267,49956936..49957046)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-010" FT /standard_name="OTTHUMP00000205798" FT /product="calcium binding protein 39-like" FT /protein_id="CAX15067.1" FT /translation="MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKS FT LQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNI FT LRRQIGTRSPTVEYISAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSN FT QFRDFFKYVELSTFDIASDAFATFK" FT CDS complement(join(<49933860..49933968,49951103..49951267, FT 49956936..49957046)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-008" FT /standard_name="OTTHUMP00000205796" FT /product="calcium binding protein 39-like" FT /protein_id="CAX15068.1" FT /translation="MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKS FT LQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNI FT LRRQIGTRSPTVEYISAHPHILFM" FT CDS complement(join(<49951099..49951267,49956936..49957046)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-009" FT /standard_name="OTTHUMP00000205797" FT /product="calcium binding protein 39-like" FT /protein_id="CAX15069.1" FT /translation="MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKS FT LQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEV" FT CDS complement(join(AL138875.8:71640..71819,49906083..49906226, FT 49913813..49913878,49918315..49918374,49924880..49925048, FT 49933850..49933968,49951103..49951267,49956936..49957046)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-005" FT /standard_name="OTTHUMP00000205794" FT /product="calcium binding protein 39-like" FT /protein_id="CAI10816.1" FT /translation="MKKMPLFSKSHKNPAEIVKILKDNLAILEKQDKKTDKASEEVSKS FT LQAMKEILCGTNEKEPPTEAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNI FT LRRQIGTRSPTVEYISAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSN FT QFRDFFKYVELSTFDIASDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENY FT VTKRQSLKLLGELILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFV FT ASPHKTQPIVEILLKNQPKLIEFLSSFQKERTDDEQFADEKNYLIKQIRDLKKTAP" FT mRNA complement(join(AL138875.8:69476..71819,49906083..49906226, FT 49913813..49913878,49918315..49918374,49924880..49925048, FT 49933850..49933968,49951103..49951267,49956936..49957077, FT 49975269..49975735)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-001" FT /product="calcium binding protein 39-like" FT /note="match: cDNAs: Em:AK022639.1 Em:BC010993.2" FT /note="match: ESTs: Em:AI095742.1 Em:AI252223.1 FT Em:AI341575.1 Em:AI375422.1 Em:AI807383.1 Em:AI906088.1 FT Em:AI956166.1 Em:AW264209.1 Em:BM976125.1 Em:BQ025082.1 FT Em:BU679452.1 Em:CA450475.1 Em:CN285067.1 Em:DB279812.1" FT mRNA complement(join(<49924879..49925048,49933850..49933968, FT 49951103..49951267,49956936..49957077,49975531..49975661)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-010" FT /product="calcium binding protein 39-like" FT /note="match: ESTs: Em:BX483012.1 Em:CD103801.1 FT Em:CD105036.1" FT mRNA complement(join(49956643..49957077,49975269..49975406, FT 49975531..49975723,49987048..49987176)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-004" FT /product="calcium binding protein 39-like" FT /note="match: ESTs: Em:AV725383 Em:DB033467.1" FT mRNA complement(join(<49951099..49951267,49956936..49957077, FT 49987048..49987176,49987860..49987887)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-009" FT /product="calcium binding protein 39-like" FT /note="match: ESTs: Em:DB445306.1 Em:DB457246.1" FT mRNA complement(join(<49933860..49933968,49951103..49951267, FT 49956936..49957077,49967149..49967215,49994462..49994611)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-008" FT /product="calcium binding protein 39-like" FT /note="match: ESTs: Em:DA131423.1" FT misc_feature 50005817 FT /note="Clone_left_end: RP11-185C18" FT mRNA complement(join(AL138875.8:71478..71819,49906083..49906226, FT 49913813..49913878,49918315..49918374,49924880..49925048, FT 49933850..49933968,49951103..49951267,49956936..49957077, FT 49975269..49975406,50007454..50007529,50008222..50008359, FT 50018122..50018189)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-005" FT /product="calcium binding protein 39-like" FT /note="match: cDNAs: Em:AY288977.2" FT mRNA complement(join(AL138875.8:70624..71819,49906083..49906226, FT 49913813..49913878,49918315..49918374,49924880..49925048, FT 49933850..49933968,49951103..49951267,49956936..49957077, FT 50007454..50007529,50008222..50008359,50018122..50018262)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-003" FT /product="calcium binding protein 39-like" FT /note="match: cDNAs: Em:BX647518.1" FT /note="match: ESTs: Em:BF675983 Em:BG717488 Em:BG718664 FT Em:BI768822" FT mRNA complement(join(49975632..49975723,49988140..49988335, FT 50007454..50007529,50008222..50008359,50018122..50018200)) FT /gene="CAB39L" FT /locus_tag="RP11-103J18.3-007" FT /product="calcium binding protein 39-like" FT /note="match: ESTs: Em:DB111113.1" FT mRNA join(50018510..50018993,50025689..50026045, FT 50034243..50034368,50035233..50035298,50038157..50038192, FT 50042000..50042096,50050612..50051175,50054355..50054471, FT 50055083..50055252,50056873..50057098,50057600..50057699, FT 50059766..50059859,50062426..50062766, FT AL139321.28:2178..2266,AL139321.28:3088..3526) FT /gene="SETDB2" FT /locus_tag="RP11-185C18.2-001" FT /product="SET domain, bifurcated 2" FT /note="match: cDNAs: Em:AF334407.1" FT mRNA join(50018820..50018993,50019689..50020088) FT /gene="SETDB2" FT /locus_tag="RP11-185C18.2-002" FT /product="SET domain, bifurcated 2" FT /note="match: cDNAs: Em:AF277186" FT mRNA join(50018895..50018993,50025689..50026045, FT 50034243..50034368,50035233..50035298,50042000..50042096, FT 50050612..50051175,50054355..50054471,50055083..50055252, FT 50056873..50057098,50057600..50057699,50059766..50059947) FT /gene="SETDB2" FT /locus_tag="RP11-185C18.2-003" FT /product="SET domain, bifurcated 2" FT /note="match: cDNAs: Em:CR608721.1" FT CDS join(50026030..50026045,50034243..50034368, FT 50035233..50035298,50038157..50038192,50042000..50042096, FT 50050612..50051175,50054355..50054471,50055083..50055252, FT 50056873..50057098,50057600..50057699,50059766..50059859, FT 50062426..50062766,AL139321.28:2178..2266, FT AL139321.28:3088..3205) FT /gene="SETDB2" FT /locus_tag="RP11-185C18.2-001" FT /standard_name="OTTHUMP00000018417" FT /product="SET domain, bifurcated 2" FT /note="match: proteins: Sw:Q96T68.1 Tr:Q5W0A7.1" FT /protein_id="CAI10817.1" FT /translation="MGEKNGDAKTFWMELEDDGKVDFIFEQVQNVLQSLKQKIKDGSAT FT NKEYIQAMILVNEATIINSSTSIKGASQKEVNAQSSDPMPVTQKEQENKSNAFPSTSCE FT NSFPEDCTFLTTENKEILSLEDKVVDFREKDSSSNLSYQSHDCSGACLMKMPLNLKGEN FT PLQLPIKCHFQRRHAKTNSHSSALHVSYKTPCGRSLRNVEEVFRYLLETECNFLFTDNF FT SFNTYVQLARNYPKQKEVVSDVDISNGVESVPISFCNEIDSRKLPQFKYRKTVWPRAYN FT LTNFSSMFTDSCDCSEGCIDITKCACLQLTARNAKTSPLSSDKITTGYKYKRLQRQIPT FT GIYECSLLCKCNRQLCQNRVVQHGPQVRLQVFKTEQKGWGVRCLDDIDRGTFVCIYSGR FT LLSRANTEKSYGIDENGRDENTMKNIFSKKRKLEVACSDCEVEVLPLGLETHPRTAKTE FT KCPPKFSNNPKELTVETKYDNISRIQYHSVIRDPESKTAIFQHNGKKMEFVSSESVTPE FT DNDGFKPPREHLNSKTKGAQKDSSSNHVDEFEDNLLIESDVIDITKYREETPPRSRCNQ FT ATTLDNQNIKKAIEVQIQKPQEGRSTACQRQQVFCDEELLSETKNTSSDSLTKFNKGNV FT FLLDATKEGNVGRFLNHSCCPNLLVQNVFVETHNRNFPLVAFFTNRYVKARTELTWDYG FT YEAGTVPEKEIFCQCGVNKCRKKIL" FT CDS join(50026030..50026045,50034243..50034368, FT 50035233..50035298,50042000..50042096,50050612..50051175, FT 50054355..50054471,50055083..50055252,50056873..50057098, FT 50057600..50057699,50059766..50059930) FT /gene="SETDB2" FT /locus_tag="RP11-185C18.2-003" FT /standard_name="OTTHUMP00000018418" FT /product="SET domain, bifurcated 2" FT /protein_id="CAI10818.2" FT /translation="MGEKNGDAKTFWMELEDDGKVDFIFEQVQNVLQSLKQKIKDGSAT FT NKEYIQAMILVNEATIINSSTSIKDPMPVTQKEQENKSNAFPSTSCENSFPEDCTFLTT FT ENKEILSLEDKVVDFREKDSSSNLSYQSHDCSGACLMKMPLNLKGENPLQLPIKCHFQR FT RHAKTNSHSSALHVSYKTPCGRSLRNVEEVFRYLLETECNFLFTDNFSFNTYVQLARNY FT PKQKEVVSDVDISNGVESVPISFCNEIDSRKLPQFKYRKTVWPRAYNLTNFSSMFTDSC FT DCSEGCIDITKCACLQLTARNAKTSPLSSDKITTGYKYKRLQRQIPTGIYECSLLCKCN FT RQLCQNRVVQHGPQVRLQVFKTEQKGWGVRCLDDIDRGTFVCIYSGRLLSRANTEKSYG FT IDENGRDENTMKNIFSKKRKLEVACSDCEVEVLPLGLETHPRTAKTEKCPPKFSNNPKE FT LTVETKYDNISRIQYHSVIRDPESKTAIFQHNGKKMEFVSSESVTPEDNDGFKPPREHL FT NSKTKGAQSRLCFFCECLPLLPVSLSLAQYL" FT polyA_signal 50059951..50059956 FT polyA_site 50059984 FT misc_feature 50062780 FT /note="Clone_right_end: RP11-101D11" FT misc_feature 50062881..50170911 FT /note="annotated region of clone" FT CDS join(50063106..50063206,50063383..50063500) FT /pseudo FT /locus_tag="RP11-185C18.4-001" FT /product="small nuclear ribonucleoprotein polypeptide G FT (SNRPG) pseudogene" FT /note="match: proteins: Sw:P62308 Sw:P62309 Sw:P62309" FT polyA_site 50066306 FT mRNA join(50070097..50070231,50080771..50080892, FT 50087195..50087302,50092154..50092287,50095030..50095076, FT 50096179..50096243,50097311..50097377,50098221..50098352, FT 50100523..50100594,50102647..50103123) FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-001" FT /product="novel protein" FT /note="match: ESTs: Em:AA424638 Em:AL559011 Em:AW183631 FT Em:BE621153 Em:BF128753 Em:BG122224 Em:BG480717 Em:BG896445 FT Em:BI488885 Em:BI548064 Em:BM555657 Em:BM808865 Em:BM820323 FT Em:BM913393 Em:BQ437479 Em:BQ581224 Em:BQ581910" FT /note="match: cDNAs: Em:AB011031 Em:AF155105 Em:AK026228 FT Em:BC017212" FT mRNA join(50070120..50070231,50071192..50071353, FT 50080771..50080892,50087195..50087302,50092154..50092287, FT 50095030..50095076,50096179..50096196) FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-002" FT /product="novel protein" FT /note="match: ESTs: Em:BG759124" FT CDS join(50070138..50070231,50080771..50080892, FT 50087195..50087302,50092154..50092287,50095030..50095076, FT 50096179..50096243,50097311..50097377,50098221..50098352, FT 50100523..50100594,50102647..50102801) FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-001" FT /standard_name="OTTHUMP00000018414" FT /product="novel protein" FT /note="match: proteins: Sw:Q9UIL8" FT /protein_id="CAH71044.1" FT /translation="MAQASPPRPERVLGASSPEARPAQEALLLPTGVFQVAEKMEKRTC FT ALCPKDVEYNVLYFAQSENIAAHENCLLYSSGLVECEDQDPLNPDRSFDVESVKKEIQR FT GRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRGIYKLLCQQHAQFP FT IIAQSAKFSGVKRKRGRKKPLSGNHVQPPETMKCNTFIRQVKEEHGRHTDATVKVPFLK FT KCKEAGLLNYLLEEILDKVHSIPEKLMDETTSESDYEEIGSALFDCRLFEDTFVNFQAA FT IEKKIHASQQRWQQLKEEIELLQDLKQTLCSFQENRDLMSSSTSISSLSY" FT CDS join(<50070152..50070231,50087195..50087302, FT 50092154..50092287,50095030..50095076,50096179..50096243, FT 50097311..50097377,50098221..50098352,50100523..50100594, FT 50102647..50102801) FT /codon_start=3 FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-003" FT /standard_name="OTTHUMP00000018415" FT /product="novel protein" FT /protein_id="CAH71045.1" FT /translation="RPGPRGCSAPAARRPGPRRRRSSFPPLYSSGLVECEDQDPLNPDR FT SFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVPQSDGVRG FT IYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHVQPPETMKCNTFIRQVKEEHG FT RHTDATVKVPFLKKCKEAGLLNYLLEEILDKVHSIPEKLMDETTSESDYEEIGSALFDC FT RLFEDTFVNFQAAIEKKIHASQQRWQQLKEEIELLQDLKQTLCSFQENRDLMSSSTSIS FT SLSY" FT mRNA join(<50070152..50070231,50087195..50087302, FT 50092154..50092287,50095030..50095076,50096179..50096243, FT 50097311..50097377,50098221..50098352,50100523..50100594, FT 50102647..50102844) FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-003" FT /product="novel protein" FT /note="match: ESTs: Em:BE787177 Em:BF662927 Em:BF662975 FT Em:BF975113 Em:BF975344 Em:BF975988 Em:BG685447 FT Em:BG755474" FT mRNA join(50070372..50070584,50071192..50071353, FT 50087195..50087302,50092154..50092287,50096179..50096243, FT 50097311..50097361) FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-004" FT /product="novel protein" FT /note="match: ESTs: Em:BI832068 Em:BM924987" FT mRNA join(50070491..50070736,50071192..50071353, FT 50087195..50087302,50092154..50092287,50095030..50095076, FT 50096179..50096243,50097311..50097343) FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-005" FT /product="novel protein" FT /note="match: ESTs: Em:AL552215" FT mRNA join(50070536..50070618,50080771..50080892, FT 50087195..50087302,50092154..50092287,50095030..50095076, FT 50096179..50096243,50097311..>50097361) FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-006" FT /product="novel protein" FT /note="match: ESTs: Em:BI463029" FT CDS join(50080794..50080892,50087195..50087302, FT 50092154..50092287,50095030..50095076,50096179..50096243, FT 50097311..>50097361) FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-006" FT /standard_name="OTTHUMP00000018416" FT /product="novel protein" FT /protein_id="CAH71046.1" FT /translation="MEKRTCALCPKDVEYNVLYFAQSENIAAHENCLLYSSGLVECEDQ FT DPLNPDRSFDVESVKKEIQRGRKLKCKFCHKRGATVGCDLKNCNKNYHFFCAKKDDAVP FT QSDGVRGIYKLLCQQHAQFPIIAQSAKFSGVKRKRGRKKPLSGNHVQPPETMKCNTFIR FT QVKEE" FT mRNA join(50096065..50096243,50097311..50097377, FT 50098221..50098352,50099909..50100073,50100523..50100594, FT 50102647..50102672) FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-008" FT /product="novel protein" FT /note="match: ESTs: Em:AW387527.1 Em:AW387535.1 FT Em:AW581874.1 Em:AW808697.1 Em:AW808890.1 Em:BE141536.1" FT mRNA join(50096073..50096243,50097311..50098216) FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-007" FT /product="novel protein" FT /note="match: ESTs: Em:AA442190.1 Em:BE141730.1 FT Em:BI468324.1" FT mRNA join(50096092..50096243,50097311..50097377, FT 50098221..50098352,50100523..50100594,50101342..50101490) FT /gene="RP11-185C18.3" FT /locus_tag="RP11-185C18.3-009" FT /product="novel protein" FT /note="match: ESTs: Em:BE842073.1" FT polyA_signal 50103093..50103098 FT polyA_site 50103123 FT polyA_site complement(50106082) FT polyA_site complement(50106086) FT polyA_signal complement(50106102..50106107) FT mRNA complement(join(50108054..50108398,50112006..50112219, FT 50113511..50113639)) FT /gene="RCBTB1" FT /locus_tag="RP11-185C18.1-002" FT /product="regulator of chromosome condensation (RCC1) and FT BTB (POZ) domain containing protein 1" FT /note="match: ESTs: Em:BI561760" FT mRNA complement(join(50125307..50125604,50126314..50126388)) FT /gene="RCBTB1" FT /locus_tag="RP11-185C18.1-003" FT /product="regulator of chromosome condensation (RCC1) and FT BTB (POZ) domain containing protein 1" FT /note="match: ESTs: Em:BF927774.1" FT misc_feature 50131821 FT /note="Clone_left_end: RP11-432M24" FT CDS complement(join(50108258..50108398,50115012..50115142, FT 50115812..50115963,50118873..50118999,50123594..50123784, FT 50125462..50125604,50126314..50126421,50129651..50129809, FT 50134054..50134220,50140754..50140904,50141290..50141415)) FT /gene="RCBTB1" FT /locus_tag="RP11-185C18.1-001" FT /standard_name="OTTHUMP00000018413" FT /product="regulator of chromosome condensation (RCC1) and FT BTB (POZ) domain containing protein 1" FT /note="match: proteins: Sw:Q6NXM2.1 Sw:Q8NDN9.1" FT /protein_id="CAH71047.1" FT /translation="MVDVGKWPIFTLLSPQEIASIRKACVFGTSASEALYVTDNDEVFV FT FGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGY FT SQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSG FT STANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL FT TPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV FT EKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFATPA FT VSWRLLSVEHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMF FT QSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSYCENRLKKL FT CQHIIKRGITVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTEVTQTAAFWQMDGPLLK FT EFIAKASKCGAFKN" FT misc_feature 50156466..50156577 FT /note="Sequence from overlapping clone bA432M24(AL135901). FT Assembly confirmed by restriction digest" FT mRNA complement(join(50106090..50108398,50115012..50115142, FT 50115812..50115963,50118873..50118999,50123594..50123784, FT 50125462..50125604,50126314..50126421,50129651..50129809, FT 50134054..50134220,50140754..50140904,50141290..50141456, FT 50154641..50154720,50159580..50159719)) FT /gene="RCBTB1" FT /locus_tag="RP11-185C18.1-001" FT /product="regulator of chromosome condensation (RCC1) and FT BTB (POZ) domain containing protein 1" FT /note="match: ESTs: Em:AI968206.1 Em:BM667627.1 FT Em:BU753113.1 Em:CA443051.1" FT /note="match: cDNAs: Em:AF334406.1 Em:AJ319660.1 FT Em:AK096654.1 Em:AL833821.1" FT misc_feature 50167235..50167323 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 50170811 FT /note="Clone_right_end: RP11-185C18" FT mRNA join(AL136218.26:115493..115976,AL136218.26:122672..123028, FT AL136218.26:131226..131351,AL136218.26:132216..132281, FT AL136218.26:135140..135175,AL136218.26:138983..139079, FT AL136218.26:147595..148158,AL136218.26:151338..151454, FT AL136218.26:152066..152235,AL136218.26:153856..154081, FT AL136218.26:154583..154682,AL136218.26:156749..156842, FT AL136218.26:159409..159749,50064958..50065046, FT 50065868..50066306) FT /gene="SETDB2" FT /locus_tag="RP11-185C18.2-001" FT /product="SET domain, bifurcated 2" FT /note="match: cDNAs: Em:AF334407.1" FT CDS join(AL136218.26:123013..123028,AL136218.26:131226..131351, FT AL136218.26:132216..132281,AL136218.26:135140..135175, FT AL136218.26:138983..139079,AL136218.26:147595..148158, FT AL136218.26:151338..151454,AL136218.26:152066..152235, FT AL136218.26:153856..154081,AL136218.26:154583..154682, FT AL136218.26:156749..156842,AL136218.26:159409..159749, FT 50064958..50065046,50065868..50065985) FT /gene="SETDB2" FT /locus_tag="RP11-185C18.2-001" FT /standard_name="OTTHUMP00000018417" FT /product="SET domain, bifurcated 2" FT /note="match: proteins: Sw:Q96T68.1 Tr:Q5W0A7.1" FT /protein_id="CAH71048.1" FT /translation="MGEKNGDAKTFWMELEDDGKVDFIFEQVQNVLQSLKQKIKDGSAT FT NKEYIQAMILVNEATIINSSTSIKGASQKEVNAQSSDPMPVTQKEQENKSNAFPSTSCE FT NSFPEDCTFLTTENKEILSLEDKVVDFREKDSSSNLSYQSHDCSGACLMKMPLNLKGEN FT PLQLPIKCHFQRRHAKTNSHSSALHVSYKTPCGRSLRNVEEVFRYLLETECNFLFTDNF FT SFNTYVQLARNYPKQKEVVSDVDISNGVESVPISFCNEIDSRKLPQFKYRKTVWPRAYN FT LTNFSSMFTDSCDCSEGCIDITKCACLQLTARNAKTSPLSSDKITTGYKYKRLQRQIPT FT GIYECSLLCKCNRQLCQNRVVQHGPQVRLQVFKTEQKGWGVRCLDDIDRGTFVCIYSGR FT LLSRANTEKSYGIDENGRDENTMKNIFSKKRKLEVACSDCEVEVLPLGLETHPRTAKTE FT KCPPKFSNNPKELTVETKYDNISRIQYHSVIRDPESKTAIFQHNGKKMEFVSSESVTPE FT DNDGFKPPREHLNSKTKGAQKDSSSNHVDEFEDNLLIESDVIDITKYREETPPRSRCNQ FT ATTLDNQNIKKAIEVQIQKPQEGRSTACQRQQVFCDEELLSETKNTSSDSLTKFNKGNV FT FLLDATKEGNVGRFLNHSCCPNLLVQNVFVETHNRNFPLVAFFTNRYVKARTELTWDYG FT YEAGTVPEKEIFCQCGVNKCRKKIL" FT misc_feature 50170912..50320244 FT /note="annotated region of clone" FT CDS 50194450..50194782 FT /pseudo FT /locus_tag="RP11-432M24.4-001" FT /product="novel pseudogene" FT /note="match: proteins: Tr:Q9P0D3" FT mRNA join(50202435..50202751,50204566..50208008) FT /gene="ARL11" FT /locus_tag="RP11-432M24.1-001" FT /product="ADP-ribosylation factor-like 11" FT /note="match: cDNAs: Em:AF441378.1 Em:AK091249.1 FT Em:AX746876.1 Em:BC013150.1 Em:CR600646.1" FT mRNA join(50202659..50202751,50204170..50204235, FT 50206316..50206373) FT /gene="ARL11" FT /locus_tag="RP11-432M24.1-002" FT /product="ADP-ribosylation factor-like 11" FT /note="match: ESTs: Em:AI523278 Em:BF774607 Em:BM482796" FT CDS 50204584..50205174 FT /gene="ARL11" FT /locus_tag="RP11-432M24.1-001" FT /standard_name="OTTHUMP00000018420" FT /product="ADP-ribosylation factor-like 11" FT /note="match: proteins: Sw:Q969Q4.1" FT /protein_id="CAI40715.1" FT /translation="MGSVNSRGHKAEAQVVMMGLDSAGKTTLLYKLKGHQLVETLPTVG FT FNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELT FT EVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERFQDHCWELRGCSALTGEGLP FT EALQSLWSLLKSRSCMCLQARAHGAERGDSKRS" FT polyA_signal 50205953..50205958 FT polyA_signal 50206343..50206348 FT polyA_site 50206373 FT mRNA complement(join(50273447..50276034,50276522..50276616, FT 50279757..50279919,50280234..50280305,50280404..50280508, FT 50283708..50283836,50285027..50285158,50293911..50293955, FT 50296091..50296260,50296613..50296699,50299552..50299637, FT 50306507..50306602,50306741..50306793,50306883..50306912, FT 50307093..50307182,AL136301.21:941..985, FT AL136301.21:46430..46913)) FT /gene="KPNA3" FT /locus_tag="RP11-432M24.3-001" FT /product="karyopherin alpha 3 (importin alpha 4)" FT /note="match: ESTs: Em:AI391613.1 Em:AW452494.1 FT Em:BM979549.1" FT /note="match: cDNAs: Em:AK223480.1 Em:BC024202.2 FT Em:BC035090.2" FT CDS complement(join(50275936..50276034,50276522..50276616, FT 50279757..50279919,50280234..50280305,50280404..50280508, FT 50283708..50283836,50285027..50285158,50293911..50293955, FT 50296091..50296260,50296613..50296699,50299552..50299637, FT 50306507..50306602,50306741..50306793,50306883..50306912, FT 50307093..50307182,AL136301.21:941..985, FT AL136301.21:46430..46498)) FT /gene="KPNA3" FT /locus_tag="RP11-432M24.3-001" FT /standard_name="OTTHUMP00000018426" FT /product="karyopherin alpha 3 (importin alpha 4)" FT /note="match: proteins: Sw:O00505.2 Sw:O35344.1 Tr:Q53F09.1 FT Tr:Q543M7.1 Tr:Q56R18.1 Tr:Q5W0Z8.1 Tr:Q8IYQ9.1" FT /protein_id="CAI40716.1" FT /translation="MAENPSLENHRIKSFKNKGRDVETMRRHRNEVTVELRKNKRDEHL FT LKKRNVPQEESLEDSDVDADFKAQNVTLEAILQNATSDNPVVQLSAVQAARKLLSSDRN FT PPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQAVVQSNAVPLFL FT RLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTW FT VIVNLCRNKDPPPPMETVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVI FT DSGVVPFLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDVLSHFPNLLSHPKE FT KINKEAVWFLSNITAGNQQQVQAVIDAGLIPMIIHQLAKGDFGTQKEAAWAISNLTISG FT RKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLDGLKNILIMAGDEASTIAEIIEECGG FT LEKIEVLQQHENEDIYKLAFEIIDQYFSGDDIDEDPCLIPEATQGGTYNFDPTANLQTK FT EFNF" FT misc_feature 50218038 FT /note="Clone_left_end: RP11-195L15" FT misc_feature 50226677..50226688 FT /note="Area is unidirectional dGTPS" FT polyA_site complement(50234859) FT polyA_site complement(50234862) FT polyA_site complement(50234863) FT polyA_site complement(50234864) FT polyA_signal complement(50234877..50234882) FT polyA_signal complement(50234923..50234928) FT mRNA complement(join(50234859..50235344,50236002..50236063, FT 50237193..50237313,50243913..50243982,50265390..50265599)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-001" FT /product="emopamil binding protein-like" FT /note="match: ESTs: Em:BE616383 Em:BE616600" FT /note="match: cDNAs: Em:BC021021" FT mRNA complement(join(50234862..50235344,50237193..50237331, FT 50243913..50243982,50265390..50265611)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-002" FT /product="emopamil binding protein-like" FT /note="match: cDNAs: Em:AF243433.1" FT CDS complement(join(50235104..50235344,50237193..50237331, FT 50243913..50243982,50265390..50265560)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-002" FT /standard_name="OTTHUMP00000018422" FT /product="emopamil binding protein-like" FT /note="match: proteins: Sw:Q9BY08.1" FT /protein_id="CAI40719.2" FT /translation="MGAEWELGAEAGGSLLLCAALLAAGCALGLRLGRGQGAADRGALI FT WLCYDALVHFALEGPFVYLSLVGNVANSDGLIASLWKEYGKADARWVYFDPTIVSVEIL FT TVALDGSLALFLIYAIVKEKYYRHFLQITLCVCELYGCWMTFLPEWLTRSPNLNTSNWL FT YCWLYLFFFNGVWVLIPGLLLWQSWLELKKMHQKETSSVKKFQ" FT mRNA complement(join(50234859..50235344,50237193..50237313, FT 50265390..50265560)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-003" FT /product="emopamil binding protein-like" FT /note="match: ESTs: Em:AI292009 Em:AI631156 Em:AI858023 FT Em:AW183719 Em:AW193675 Em:AW628966 Em:BE219143 Em:BE326663 FT Em:BE551130" FT mRNA complement(join(50234859..50235344,50243913..50243982, FT 50265390..50265599)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-004" FT /product="emopamil binding protein-like" FT /note="match: ESTs: Em:BE791990" FT CDS complement(join(50235292..50235344,50243913..50243982, FT 50265390..50265560)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-004" FT /standard_name="OTTHUMP00000018423" FT /product="emopamil binding protein-like" FT /protein_id="CAI40718.1" FT /translation="MGAEWELGAEAGGSLLLCAALLAAGCALGLRLGRGQGAADRGALI FT WLCYDALVHFALEGPFVYLSLVGNVANSDGLIASLCISCRSPCACASCMAAG" FT mRNA complement(join(50234859..50235344,50237193..50237313, FT 50243913..50243982,50260611..50260731,50265390..50265599)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-005" FT /product="emopamil binding protein-like" FT /note="match: ESTs: Em:BQ422494" FT mRNA complement(join(50234970..50235344,50265390..50265593)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-007" FT /product="emopamil binding protein-like" FT /note="match: ESTs: Em:BG287035 Em:BI118091" FT CDS complement(join(50235207..50235344,50265390..50265560)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-007" FT /standard_name="OTTHUMP00000018425" FT /product="emopamil binding protein-like" FT /protein_id="CAI40717.1" FT /translation="MGAEWELGAEAGGSLLLCAALLAAGCALGLRLGRGQGAADRGALI FT WLCYDALVHFALAFPADHPVRVRAVWLLDDLPPRVAHQKPQPQHQQLAVLLALPVFF" FT CDS complement(join(50236039..50236063,50237193..50237313, FT 50243913..50243982,50265390..50265560)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-001" FT /standard_name="OTTHUMP00000018421" FT /product="emopamil binding protein-like" FT /protein_id="CAI40720.1" FT /translation="MGAEWELGAEAGGSLLLCAALLAAGCALGLRLGRGQGAADRGALI FT WLCYDALVHFALEGPFVYLSLVGNVANSDGLIASLSDARWVYFDPTIVSVEILTVALDG FT SLALFLIYAIVKEKYYRDRVAWGE" FT mRNA complement(join(50242306..50242705,50243913..50243982, FT 50265390..50265599)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-006" FT /product="emopamil binding protein-like" FT /note="match: ESTs: Em:BI761170" FT CDS complement(join(50242488..50242705,50243913..50243982, FT 50265390..50265560)) FT /gene="EBPL" FT /locus_tag="RP11-432M24.2-006" FT /standard_name="OTTHUMP00000018424" FT /product="emopamil binding protein-like" FT /protein_id="CAI40721.1" FT /translation="MGAEWELGAEAGGSLLLCAALLAAGCALGLRLGRGQGAADRGALI FT WLCYDALVHFALEGPFVYLSLVGNVANSDGLIASLCESRSVPQAGAQWHHLGSLQAPPP FT RFTPFSCLSLPSSWDYRRPPPRLANFFVFLVETGFHHVSQDGLDLLTS" FT polyA_site complement(50273443) FT polyA_site complement(50273455) FT polyA_site complement(50273456) FT polyA_signal complement(50273482..50273487) FT mRNA complement(join(50275346..50275663,50275992..50276034, FT 50276522..50276616,50279757..>50279888)) FT /gene="KPNA3" FT /locus_tag="RP11-432M24.3-002" FT /product="karyopherin alpha 3 (importin alpha 4)" FT /note="match: ESTs: Em:AA431116 Em:AA432131 Em:AI208960" FT CDS complement(join(50275659..50275663,50275992..50276034, FT 50276522..50276616,50279757..>50279888)) FT /codon_start=3 FT /gene="KPNA3" FT /locus_tag="RP11-432M24.3-002" FT /standard_name="OTTHUMP00000018427" FT /product="karyopherin alpha 3 (importin alpha 4)" FT /protein_id="CAI40722.1" FT /translation="PFCNLLSVKDSQVVQVVLDGLKNILIMAGDEASTIAEIIEECGGL FT EKIEVLQQHENEDIYKLAFEIIDQYFSGDDIDEDPCLIPEATQGG" FT misc_feature 50320144 FT /note="Clone_right_end: RP11-432M24" FT misc_feature 50320245..50368874 FT /note="annotated region of clone" FT mRNA complement(join(50351804..50354609,50354651..50354767)) FT /locus_tag="RP11-195L15.2-001" FT /product="putative novel transcript" FT /note="match: cDNAs: Em:AL137645.1" FT mRNA complement(join(AL135901.23:102636..105223, FT AL135901.23:105711..105805,AL135901.23:108946..109108, FT AL135901.23:109423..109494,AL135901.23:109593..109697, FT AL135901.23:112897..113025,AL135901.23:114216..114347, FT AL135901.23:123100..123144,AL135901.23:125280..125449, FT AL135901.23:125802..125888,AL135901.23:128741..128826, FT AL135901.23:135696..135791,AL135901.23:135930..135982, FT AL135901.23:136072..136101,AL135901.23:136282..136371, FT 50321085..50321129,50366574..50367057)) FT /gene="KPNA3" FT /locus_tag="RP11-432M24.3-001" FT /product="karyopherin alpha 3 (importin alpha 4)" FT /note="match: cDNAs: Em:AK223480.1 Em:BC024202.2 FT Em:BC035090.2" FT /note="match: ESTs: Em:AI391613.1 Em:AW452494.1 FT Em:BM979549.1" FT CDS complement(join(AL135901.23:105125..105223, FT AL135901.23:105711..105805,AL135901.23:108946..109108, FT AL135901.23:109423..109494,AL135901.23:109593..109697, FT AL135901.23:112897..113025,AL135901.23:114216..114347, FT AL135901.23:123100..123144,AL135901.23:125280..125449, FT AL135901.23:125802..125888,AL135901.23:128741..128826, FT AL135901.23:135696..135791,AL135901.23:135930..135982, FT AL135901.23:136072..136101,AL135901.23:136282..136371, FT 50321085..50321129,50366574..50366642)) FT /gene="KPNA3" FT /locus_tag="RP11-432M24.3-001" FT /standard_name="OTTHUMP00000018426" FT /product="karyopherin alpha 3 (importin alpha 4)" FT /note="match: proteins: Sw:O00505.2 Sw:O35344.1 Tr:Q53F09.1 FT Tr:Q543M7.1 Tr:Q56R18.1 Tr:Q5W0Z8.1 Tr:Q8IYQ9.1" FT /protein_id="CAH71145.1" FT /translation="MAENPSLENHRIKSFKNKGRDVETMRRHRNEVTVELRKNKRDEHL FT LKKRNVPQEESLEDSDVDADFKAQNVTLEAILQNATSDNPVVQLSAVQAARKLLSSDRN FT PPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQAVVQSNAVPLFL FT RLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTW FT VIVNLCRNKDPPPPMETVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVI FT DSGVVPFLVPLLSHQEVKVQTAALRAVGNIVTGTDEQTQVVLNCDVLSHFPNLLSHPKE FT KINKEAVWFLSNITAGNQQQVQAVIDAGLIPMIIHQLAKGDFGTQKEAAWAISNLTISG FT RKDQVEYLVQQNVIPPFCNLLSVKDSQVVQVVLDGLKNILIMAGDEASTIAEIIEECGG FT LEKIEVLQQHENEDIYKLAFEIIDQYFSGDDIDEDPCLIPEATQGGTYNFDPTANLQTK FT EFNF" FT misc_feature 50368675 FT /note="Clone_left_end: RP11-236M15" FT misc_feature 50368875..50546925 FT /note="annotated region of clone" FT misc_feature 50395979 FT /note="Clone_right_end: RP11-195L15" FT misc_feature 50434443 FT /note="Clone_left_end: RP11-364I19" FT CDS 50464727..50467134 FT /pseudo FT /locus_tag="RP11-236M15.1-001" FT /product="meningioma expressed antigen 6 (coiled-coil FT proline-rich) (MGEA6) pseudogene" FT /note="match: proteins: Sw:O15320 Sw:Q8IX94 Sw:Q96RT6 FT Tr:Q92580 Tr:Q96N90" FT polyA_site complement(50486842) FT polyA_signal complement(50486861..50486866) FT polyA_site complement(50488379) FT polyA_signal complement(50488407..50488412) FT polyA_site complement(50488604) FT mRNA complement(join(50505154..50505270,50509753..50509889)) FT /gene="C13orf1" FT /locus_tag="RP11-236M15.2-002" FT /product="chromosome 13 open reading frame 1" FT /note="match: ESTs: Em:R21946" FT mRNA complement(join(50486846..50487274,50487889..50489296, FT 50495614..50495716,50502055..50502221,50510266..50510623)) FT /gene="C13orf1" FT /locus_tag="RP11-236M15.2-003" FT /product="chromosome 13 open reading frame 1" FT /note="match: ESTs: Em:BG706212" FT /note="match: cDNAs: Em:BC022519" FT mRNA complement(join(50486842..50489296,50495614..50495716, FT 50502055..50502221,50505154..50505270,50510266..50510476)) FT /gene="C13orf1" FT /locus_tag="RP11-236M15.2-001" FT /product="chromosome 13 open reading frame 1" FT /note="match: ESTs: Em:BM677444.1 Em:BX091198.1 FT Em:CR741290.1" FT /note="match: cDNAs: Em:AF052154.1 Em:AF055016.1 FT Em:AF334405.1 Em:BC007076.1" FT CDS complement(join(50489199..50489296,50495614..50495716, FT 50502055..50502221,50505154..50505270,50510266..50510371)) FT /gene="C13orf1" FT /locus_tag="RP11-236M15.2-001" FT /standard_name="OTTHUMP00000018428" FT /product="chromosome 13 open reading frame 1" FT /note="match: proteins: Sw:Q2T9X3.1 Sw:Q5M7T2.1 Sw:Q5ZHV7.1 FT Tr:Q7SX89.1" FT /protein_id="CAH71578.1" FT /translation="MATSVLCCLRCCRDGGTGHIPLKEMPAVQLDTQHMGTDVVIVKNG FT RRICGTGGCLASAPLHQNKSYFEFKIQSTGIWGIGVATQKVNLNQIPLGRDMHSLVMRN FT DGALYHNNEEKNRLPANSLPQEGDVVGITYDHVELNVYLNGKNMHCPASGIRGTVYPVV FT YVDDSAILDCQFSEFYHTPPPGFEKILFEQQIF" FT misc_feature 50546825 FT /note="Clone_right_end: RP11-236M15" FT misc_feature 50546926..50582677 FT /note="annotated region of clone" FT misc_feature 50569035..50569129 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 50569068..50569089 FT /note="Single clone region. Assembly consistent with FT restriction digest data" FT misc_feature 50569090 FT /note="Single clone region. Assembly consistent with FT restriction digest data" FT misc_feature 50569091..50569129 FT /note="Single clone region. Assembly consistent with FT restriction digest data" FT misc_feature 50569130 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 100 bp by restriction digest data" FT mRNA join(50570024..50570111,50571803..50571899, FT 50575131..50575244,AL137060.13:5394..>5786) FT /gene="TRIM13" FT /locus_tag="RP11-34F20.3-002" FT /product="tripartite motif-containing 13" FT /note="match: ESTs: Em:BG718712.1" FT mRNA join(50570639..50570986,50571803..50571899, FT AL137060.13:5394..>6199) FT /gene="TRIM13" FT /locus_tag="RP11-34F20.3-004" FT /product="tripartite motif-containing 13" FT /note="match: ESTs: Em:BG718270 Em:BG723498 Em:BI462388 FT Em:BI520507 Em:BQ420389" FT mRNA join(50570949..50570986,50571803..50571899, FT AL137060.13:13673..13940) FT /gene="KCNRG" FT /locus_tag="RP11-34F20.6-003" FT /product="potassium channel regulator" FT /note="match: ESTs: Em:AA815248.1" FT mRNA join(50571155..50571267,50571803..50571899, FT AL137060.13:5394..7790) FT /gene="TRIM13" FT /locus_tag="RP11-34F20.3-001" FT /product="tripartite motif-containing 13" FT /note="match: cDNAs: Em:AF220127 Em:AF241850 Em:AK001806 FT Em:AL360196" FT /note="match: ESTs: Em:AI082097 Em:AI174535 Em:AI400465 FT Em:AI433784 Em:AI637644 Em:AI675587 Em:AL526848 Em:AU117766 FT Em:AU134155 Em:AU155253 Em:AW874522 Em:AW961863 Em:BG054611 FT Em:BG401428 Em:BI090269 Em:BI183262 Em:BI194225 Em:BI562426 FT Em:BM563515 Em:BM673398 Em:BM682100 Em:BM811480 Em:BQ011072 FT Em:BQ018724" FT mRNA join(50571155..50571267,50571803..50571899, FT AL137060.13:13673..13940) FT /gene="KCNRG" FT /locus_tag="RP11-34F20.6-004" FT /product="potassium channel regulator" FT /note="match: ESTs: Em:AW117349.1 Em:AW118624.1 FT Em:BG899146.1" FT mRNA join(50571195..50571352,50571803..50571899, FT AL137060.13:5394..6627) FT /gene="TRIM13" FT /locus_tag="RP11-34F20.3-003" FT /product="tripartite motif-containing 13" FT /note="match: cDNAs: Em:AY191002.1 Em:BC003579.1" FT misc_feature 50578678 FT /note="Clone_left_end: RP11-34F20" FT misc_feature 50582678..50735564 FT /note="annotated region of clone" FT CDS 50586077..>50586463 FT /gene="TRIM13" FT /locus_tag="RP11-34F20.3-002" FT /standard_name="OTTHUMP00000018430" FT /product="tripartite motif-containing 13" FT /protein_id="CAH72825.1" FT /translation="MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNS FT LWRPAPFKCPTCRKETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNI FT FCLTDMQLICGICATRGEHTKHVFC" FT CDS 50586077..>50586876 FT /gene="TRIM13" FT /locus_tag="RP11-34F20.3-004" FT /standard_name="OTTHUMP00000018433" FT /product="tripartite motif-containing 13" FT /protein_id="CAH72826.1" FT /translation="MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNS FT LWRPAPFKCPTCRKETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNI FT FCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDT FT LETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKL FT NTILQEQRMAFNIAEAFKDVSEPIVFLQQMQEFREKIKVIKETP" FT CDS 50586077..50587300 FT /gene="TRIM13" FT /locus_tag="RP11-34F20.3-001" FT /standard_name="OTTHUMP00000018431" FT /product="tripartite motif-containing 13" FT /note="match: proteins: Sw:O60858 Sw:Q9BYJ4 Sw:Q9CYB0 FT Tr:Q922Y2 Tr:Q9CUD5" FT /protein_id="CAC43391.1" FT /translation="MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNS FT LWRPAPFKCPTCRKETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNI FT FCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDT FT LETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKL FT NTILQEQRMAFNIAEAFKDVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNF FT DTSQWEDIKLVDVDKLSLPQDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSL FT FDDLATWKGCLSNFSSYLTKTADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAE FT FVCKYKLL" FT polyA_signal 50587286..50587291 FT polyA_site 50587306 FT mRNA join(50589390..50590207,50592959..50593056, FT 50594350..50595056) FT /gene="KCNRG" FT /locus_tag="RP11-34F20.6-001" FT /product="potassium channel regulator" FT /note="match: ESTs: Em:AA910541.1 Em:AI633948.1 FT Em:W68737.1" FT /note="match: cDNAs: Em:AY129653.1 Em:AY169387.1 FT Em:BC020887.1" FT mRNA join(50589390..50590207,50594350..50595058) FT /gene="KCNRG" FT /locus_tag="RP11-34F20.6-002" FT /product="potassium channel regulator" FT /note="match: cDNAs: Em:AY169388.1 Em:BC032343.1" FT CDS join(50589630..50590207,50592959..50593056, FT 50594350..50594363) FT /gene="KCNRG" FT /locus_tag="RP11-34F20.6-001" FT /standard_name="OTTHUMP00000178640" FT /product="potassium channel regulator" FT /protein_id="CAM17621.1" FT /translation="MSSQELVTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQEFKMV FT GGQIFVDRDGDLFSFILDFLRTHQLLLPTEFSDYLRLQREALFYELRSLVDLLNPYLLQ FT PRPALVEVHFLSRNTQAFFRVFGSCSKTIEMLTGRITVFTEQPSAPTWNGNFFPPQMTL FT LPLPPQRPSYHDLVFQCGSDSTTDNQTGVRLVCNGVISAHHNLRLWGSSDSPASASRVA FT GITGMFL" FT CDS join(50589630..50590207,50594350..50594590) FT /gene="KCNRG" FT /locus_tag="RP11-34F20.6-002" FT /standard_name="OTTHUMP00000178641" FT /product="potassium channel regulator" FT /note="match: proteins: Sw:Q8N5I3.1" FT /protein_id="CAM17622.1" FT /translation="MSSQELVTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQEFKMV FT GGQIFVDRDGDLFSFILDFLRTHQLLLPTEFSDYLRLQREALFYELRSLVDLLNPYLLQ FT PRPALVEVHFLSRNTQAFFRVFGSCSKTIEMLTGRITVFTEQPSAPTWNGNFFPPQMTL FT LPLPPQRPSYHDLVFQCGSDSTTDNQTGVRYVSIKPDNRKLANGTNVLGLLIDTLLKEG FT FHLVSTRTVSSEDKTECYSFERIKSPEVLITNETPKPETIIIPEQSQIKK" FT polyA_signal 50594578..50594583 FT polyA_site 50594611 FT polyA_signal 50595024..50595029 FT polyA_site 50595058 FT mRNA join(AL391993.20:25099..25186,AL391993.20:26878..26974, FT AL391993.20:30206..30319,50586071..>50586463) FT /gene="TRIM13" FT /locus_tag="RP11-34F20.3-002" FT /product="tripartite motif-containing 13" FT /note="match: ESTs: Em:BG718712.1" FT mRNA join(AL391993.20:25714..26061,AL391993.20:26878..26974, FT 50586071..>50586876) FT /gene="TRIM13" FT /locus_tag="RP11-34F20.3-004" FT /product="tripartite motif-containing 13" FT /note="match: ESTs: Em:BG718270 Em:BG723498 Em:BI462388 FT Em:BI520507 Em:BQ420389" FT mRNA join(AL391993.20:26024..26061,AL391993.20:26878..26974, FT 50594350..50594617) FT /gene="KCNRG" FT /locus_tag="RP11-34F20.6-003" FT /product="potassium channel regulator" FT /note="match: ESTs: Em:AA815248.1" FT mRNA join(AL391993.20:26230..26342,AL391993.20:26878..26974, FT 50586071..50588467) FT /gene="TRIM13" FT /locus_tag="RP11-34F20.3-001" FT /product="tripartite motif-containing 13" FT /note="match: ESTs: Em:AI082097 Em:AI174535 Em:AI400465 FT Em:AI433784 Em:AI637644 Em:AI675587 Em:AL526848 Em:AU117766 FT Em:AU134155 Em:AU155253 Em:AW874522 Em:AW961863 Em:BG054611 FT Em:BG401428 Em:BI090269 Em:BI183262 Em:BI194225 Em:BI562426 FT Em:BM563515 Em:BM673398 Em:BM682100 Em:BM811480 Em:BQ011072 FT Em:BQ018724" FT /note="match: cDNAs: Em:AF220127 Em:AF241850 Em:AK001806 FT Em:AL360196" FT mRNA join(AL391993.20:26230..26342,AL391993.20:26878..26974, FT 50594350..50594617) FT /gene="KCNRG" FT /locus_tag="RP11-34F20.6-004" FT /product="potassium channel regulator" FT /note="match: ESTs: Em:AW117349.1 Em:AW118624.1 FT Em:BG899146.1" FT mRNA join(AL391993.20:26270..26427,AL391993.20:26878..26974, FT 50586071..50587304) FT /gene="TRIM13" FT /locus_tag="RP11-34F20.3-003" FT /product="tripartite motif-containing 13" FT /note="match: cDNAs: Em:AY191002.1 Em:BC003579.1" FT misc_feature 50609105 FT /note="Clone_right_end: RP11-364I19" FT polyA_site complement(50617573) FT polyA_signal complement(50617586..50617591) FT mRNA join(50638816..50639103,50640237..50640735) FT /locus_tag="RP11-34F20.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG531456.1" FT mRNA complement(join(50618523..50618904,50623720..50623798, FT 50642233..50642299,50655958..50656128)) FT /gene="DLEU2" FT /locus_tag="RP11-34F20.2-001" FT /product="deleted in lymphocytic leukemia 2 (non-protein FT coding)" FT /note="match: ESTs: Em:BG613187 Em:BM788401" FT mRNA complement(join(50613528..50613871,50618657..50618904, FT 50619242..50619368,50623720..50623798,50642233..50642299, FT 50649695..50649789,50655959..50656114)) FT /gene="DLEU2" FT /locus_tag="RP11-34F20.2-007" FT /product="deleted in lymphocytic leukemia 2 (non-protein FT coding)" FT /note="match: ESTs: Em:BF130431.1" FT /note="match: cDNAs: Em:BC006995.1" FT mRNA complement(join(50618651..50618904,50623720..50623798, FT 50642233..50642299,50644718..50644777,50649695..50649789, FT 50655959..50656108)) FT /gene="DLEU2" FT /locus_tag="RP11-34F20.2-005" FT /product="deleted in lymphocytic leukemia 2 (non-protein FT coding)" FT /note="match: ESTs: Em:BE737954.1" FT mRNA complement(join(50617572..50618904,50619254..50619368, FT 50623720..50623798,50642233..50642299,50649695..50649789, FT 50655304..50655548,50655959..50656114)) FT /gene="DLEU2" FT /locus_tag="RP11-34F20.2-006" FT /product="deleted in lymphocytic leukemia 2 (non-protein FT coding)" FT /note="match: ESTs: Em:AA640397.1 Em:AU148003.1 FT Em:BG834290.1 Em:BG834992.1" FT /note="match: cDNAs: Em:AF264787.1" FT mRNA complement(join(50618051..50618904,50623720..50623798, FT 50642233..50642299,50649695..50649789,50655959..50656114)) FT /gene="DLEU2" FT /locus_tag="RP11-34F20.2-008" FT /product="deleted in lymphocytic leukemia 2 (non-protein FT coding)" FT /note="match: ESTs: Em:AW955644 Em:BF541521 Em:BG500819 FT Em:BG503261 Em:BG532063 Em:BG615461 Em:BM833794" FT /note="match: cDNAs: Em:BC017819 Em:BC022282 Em:BC026275" FT mRNA complement(join(50623325..50623798,50642233..50642299, FT 50655959..50656109)) FT /gene="DLEU2" FT /locus_tag="RP11-34F20.2-002" FT /product="deleted in lymphocytic leukemia 2 (non-protein FT coding)" FT /note="match: ESTs: Em:BM905770" FT mRNA complement(join(50623326..50623798,50642233..50642299, FT 50649695..50649789,50655959..50656114)) FT /gene="DLEU2" FT /locus_tag="RP11-34F20.2-003" FT /product="deleted in lymphocytic leukemia 2 (non-protein FT coding)" FT /note="match: ESTs: Em:AL536954" FT mRNA join(50656307..50656693,AL158195.11:12361..12454) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-036" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412038" FT mRNA join(50656307..50656693,50657278..50657330, FT AL138696.16:91670..91828,AL158195.11:55576..55713, FT AL158195.11:80166..80276,AL161424.13:26920..27118) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-009" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412056" FT mRNA join(50656307..50656693,AL158195.11:37252..37365, FT AL158195.11:55576..55713,AL161424.13:26920..27118) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-019" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412026" FT mRNA join(50656307..50656693,50657278..50657330, FT AL158195.11:12361..12454,AL158195.11:55576..55713, FT AL158195.11:114814..114924,AL161424.13:26920..27118) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-023" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412055.1" FT mRNA join(50656307..50656693,50657278..50657330, FT AL158195.11:12361..12454,AL158195.11:37252..37365, FT AL158195.11:55576..55713,AL161424.13:27234..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-001" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412057" FT mRNA join(50656307..50656693,50657278..50657330, FT AL158195.11:37252..37365,AL158195.11:55576..55713, FT AL158195.11:114814..114924,AL161424.13:27234..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-002" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412058" FT mRNA join(50656307..50656693,50657278..50657330, FT AL158195.11:12361..12454,AL158195.11:37252..37365, FT AL158195.11:55576..55713,AL158195.11:114814..114924, FT AL161424.13:26920..27118,AL161424.13:27234..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-003" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412059 Em:AJ412061" FT mRNA join(50656307..50656693,50730963..50732212, FT AL158195.11:55576..55713,AL158195.11:114814..114924, FT AL161424.13:26920..27118,AL161424.13:27234..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-005" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412060" FT mRNA join(50656307..50656693,50657278..50657330, FT AL158195.11:12361..12454,AL158195.11:37252..37365, FT AL158195.11:55576..55713,AL161424.13:26920..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-007" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412062" FT mRNA join(50656307..50656693,50657278..50657330, FT 50657946..50658107) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-035" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412025" FT mRNA join(50656307..50656693,50678840..50679433) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-033" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: ESTs: Em:AA196687 Em:AL558389 Em:AL558390 FT Em:AL561217 Em:AL561218 Em:BF185711 Em:BF574874 Em:BF793415 FT Em:BG619964 Em:BI713044 Em:BI857376 Em:BM725594" FT /note="match: cDNAs: Em:AJ412023 Em:BC020692 Em:Y15227" FT mRNA join(50656307..50656693,50657278..50657330, FT 50678840..50679433) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-034" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412024" FT mRNA join(50656307..50656693,50657278..50657330, FT AL138696.16:27926..28040,AL158195.11:37252..37365, FT AL158195.11:55576..55713,AL158195.11:114814..114924) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-017" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412054" FT CDS join(50656573..50656693,50678840..50678955) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-033" FT /standard_name="OTTHUMP00000018435" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: proteins: Sw:O43261" FT /protein_id="CAC43393.1" FT /translation="MRPCIWIHVHLKPPCRLVELLPFSSALQGLSHLSLGTTLPVILPE FT RNEEQNLQELSHNADKYQMGDCCKEEIDDSIFY" FT CDS 50673467..50674004 FT /pseudo FT /locus_tag="RP11-34F20.4-001" FT /product="ribosomal protein L18 (RPL18) pseudogene" FT /note="match: proteins: Sw:O65729 Sw:P02412 Sw:P09897 FT Sw:P12001 Sw:P24558 Sw:P35980 Sw:P50885 Sw:P69091 Sw:Q07020 FT Sw:Q07020 Sw:Q90YV0 Tr:O45946 Tr:Q8UW20 Tr:Q962Y8 Tr:Q98SG3 FT Tr:Q9BML2 Tr:Q9VS34 Tr:Q9W6X7" FT polyA_signal 50679413..50679418 FT polyA_site 50679433 FT misc_feature 50694913 FT /note="Clone_left_end: RP11-480P3" FT mRNA complement(join(50601269..50601542,50603414..50603628, FT 50618787..50618904,50623720..50623798,50642233..50642299, FT 50649695..50649789,50699438..50699856)) FT /gene="DLEU2" FT /locus_tag="RP11-34F20.2-004" FT /product="deleted in lymphocytic leukemia 2 (non-protein FT coding)" FT /note="match: ESTs: Em:AA868558.1 Em:BF541521.1 FT Em:BI907938.1" FT /note="match: cDNAs: Em:AF380424" FT misc_feature 50733564 FT /note="Clone_right_end: RP11-34F20" FT misc_feature 50735565..50821242 FT /note="annotated region of clone" FT CDS 50746225..50747317 FT /pseudo FT /locus_tag="RP11-480P3.1-001" FT /product="suppression of tumorigenicity 13 (colon FT carcinoma) (Hsp70 interacting protein) (ST13) pseudogene" FT /note="match: proteins: Sw:P50502 Sw:P50503 Sw:Q08168 FT Sw:Q99L47 Sw:Q9USI5 Tr:O45786 Tr:O49648 Tr:Q8VWG7 Tr:Q8VZH4 FT Tr:Q93X83 Tr:Q93YR3 Tr:Q9LVI3 Tr:Q9SI76 Tr:Q9STH1 Tr:Q9TX81 FT Tr:Q9W4Q2" FT mRNA join(50760016..50760206,AL138696.16:27926..28040, FT AL158195.11:12361..12454) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-011" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412040 Em:AJ412041" FT mRNA join(50760016..50760206,AL158195.11:12361..12454, FT AL158195.11:37252..37365,AL158195.11:55576..55713, FT AL161424.13:26920..27118) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-012" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412040 Em:AJ412043" FT mRNA join(50760016..50760206,AL158195.11:12361..12454, FT AL158195.11:55576..55713,AL158195.11:114814..114924) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-022" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412040 Em:AJ412042.1" FT misc_feature 50780122..50780141 FT /note="Sequence confirmed by AC013358. Sequenced by UOKNOR" FT misc_feature 50780293..50780624 FT /note="Sequence confirmed by AC013358. Sequenced by UOKNOR" FT misc_feature 50780666..50780679 FT /note="Sequence confirmed by AC013358. Sequenced by UOKNOR" FT mRNA join(50795409..50795435,AL138696.16:1295..1372, FT AL138696.16:88187..88260,AL138696.16:89230..89270, FT AL158195.11:12361..12454,AL158195.11:23389..23529) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-015" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412045" FT mRNA join(50798417..50798513,AL158195.11:12361..12454, FT AL158195.11:23389..23529) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-018" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412046" FT misc_feature 50821043 FT /note="Clone_left_end: RP11-369L4" FT misc_feature 50821243..50952073 FT /note="annotated region of clone" FT mRNA join(AL157367.15:24552..24742,50849068..50849182, FT AL158195.11:12361..12454) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-011" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412040 Em:AJ412041" FT mRNA join(50867558..50867669,AL158195.11:12361..12454, FT AL158195.11:37252..37365) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-013" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412049" FT mRNA join(AL157367.15:59945..59971,50822437..50822514, FT 50909329..50909402,50910372..50910412, FT AL158195.11:12361..12454,AL158195.11:23389..23529) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-015" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412045" FT mRNA join(50884298..50884477,AL158195.11:12361..12454) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-014" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412047 Em:AJ412048" FT misc_feature 50890130 FT /note="Clone_right_end: RP11-480P3" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT 50912812..50912970,AL158195.11:55576..55713, FT AL158195.11:80166..80276,AL161424.13:26920..27118) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-009" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412056" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT 50849068..50849182,AL158195.11:37252..37365, FT AL158195.11:55576..55713,AL158195.11:114814..114924) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-017" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412054" FT mRNA join(50903770..50903848,AL158195.11:11250..11717, FT AL158195.11:12361..12454,AL158195.11:23389..23529) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-016" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412050 Em:AJ412051" FT misc_feature 50919889..50919906 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT CDS complement(50935546..50935899) FT /pseudo FT /locus_tag="RP11-369L4.1-001" FT /product="ribosomal protein L34 (RPL34) pseudogene" FT /note="match: proteins: Sw:O42846 Sw:P11250 Sw:P49207 FT Sw:Q29223 Sw:Q90YT5 Sw:Q9D1R9 Sw:Q9URT8 Tr:Q8QFW7 Tr:Q8SYG0 FT Tr:Q8WQI6 Tr:Q96W42 Tr:Q9VBH8 Tr:Q9VHE5" FT misc_feature 50951874 FT /note="Clone_left_end: RP11-48H1" FT misc_feature 50952074..51075182 FT /note="annotated region of clone" FT mRNA join(50964334..50964427,50989225..50989338, FT 51007549..51007686,AL137880.13:4618..4681, FT AL137880.13:8110..8207,AL137880.13:8493..9034) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-032" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412029.1" FT mRNA join(50964334..50964427,50989225..50989338, FT 51066787..51066897,AL161424.13:26920..27118) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-020" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412028 Em:AJ412028.1" FT mRNA join(50964334..50964427,51007549..51007686, FT AL161424.13:26920..27118) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-026" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412063" FT mRNA join(50964334..50964427,50989225..50989338, FT 51007549..51007686,51066787..51066897, FT AL161424.13:88529..88630,AC007304.11:52790..52842) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-006" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412027.1" FT mRNA join(50971580..50972032,50989225..50989338) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-029" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412052" FT mRNA join(50975362..50975502,50975601..50975775, FT 50978567..50978660,50982190..50982598,50989225..50989338, FT 51007549..51007686,51066787..51066897, FT AL161424.13:26920..27118,AL161424.13:27234..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-010" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412032" FT mRNA join(50975362..50975502,50982188..50983258) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-028" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412030" FT mRNA join(50975362..50975502,50975601..50975775, FT 50978567..50978660,50982190..50982306,50982795..50983011, FT 50987113..50987265,50989225..50989338,51007549..51007686, FT 51066787..51066897,AL161424.13:1866..1934, FT AC007304.11:35477..35799,AC007304.11:57911..58275) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-004" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412031 Em:AJ412053" FT misc_feature 50975943 FT /note="Clone_right_end: RP11-369L4" FT mRNA join(AL157367.15:24552..24742,AL138696.16:27926..28040, FT 50964334..50964427) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-011" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412040 Em:AJ412041" FT mRNA join(AL157367.15:24552..24742,50964334..50964427, FT 50989225..50989338,51007549..51007686, FT AL161424.13:26920..27118) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-012" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412040 Em:AJ412043" FT mRNA join(AL157367.15:24552..24742,50964334..50964427, FT 51007549..51007686,51066787..51066897) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-022" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412040 Em:AJ412042.1" FT mRNA join(50989225..50989338,AL161424.13:26920..27118, FT AL161424.13:27234..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-024" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412035" FT mRNA join(50989225..50989338,51007549..51007686, FT 51066787..51066897,AL161424.13:32248..32915) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-021" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412036.1" FT mRNA join(50989225..50989338,51007549..51007686, FT AL161424.13:26920..27118,AL161424.13:32248..32915) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-025" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412037" FT mRNA join(50989225..50989338,51007549..51007686, FT 51049316..51049702) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-031" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412033.1" FT mRNA join(50989225..50989338,51007549..51007686, FT 51066787..51066897,51067608..51067670,51069312..51069605) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-030" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412034.1" FT mRNA join(AL138696.16:46416..46527,50964334..50964427, FT 50989225..50989338) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-013" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412049" FT mRNA join(AL157367.15:59945..59971,AL138696.16:1295..1372, FT AL138696.16:88187..88260,AL138696.16:89230..89270, FT 50964334..50964427,50975362..50975502) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-015" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412045" FT mRNA join(AL157367.15:62953..63049,50964334..50964427, FT 50975362..50975502) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-018" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412046" FT mRNA join(AL138696.16:63156..63335,50964334..50964427) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-014" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412047 Em:AJ412048" FT misc_feature 51019083 FT /note="Clone_left_end: RP11-175B12" FT mRNA join(AL137060.13:75630..76016,50964334..50964427) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-036" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412038" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT AL138696.16:91670..91828,51007549..51007686, FT 51032139..51032249,AL161424.13:26920..27118) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-009" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412056" FT mRNA join(AL137060.13:75630..76016,50989225..50989338, FT 51007549..51007686,AL161424.13:26920..27118) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-019" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412026" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT 50964334..50964427,51007549..51007686,51066787..51066897, FT AL161424.13:26920..27118) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-023" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412055.1" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT 50964334..50964427,50989225..50989338,51007549..51007686, FT AL161424.13:27234..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-001" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412057" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT 50989225..50989338,51007549..51007686,51066787..51066897, FT AL161424.13:27234..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-002" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412058" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT 50964334..50964427,50989225..50989338,51007549..51007686, FT 51066787..51066897,AL161424.13:26920..27118, FT AL161424.13:27234..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-003" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412059 Em:AJ412061" FT mRNA join(AL137060.13:75630..76016,AL137060.13:150286..151535, FT 51007549..51007686,51066787..51066897, FT AL161424.13:26920..27118,AL161424.13:27234..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-005" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412060" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT 50964334..50964427,50989225..50989338,51007549..51007686, FT AL161424.13:26920..27588) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-007" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412062" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT AL138696.16:27926..28040,50989225..50989338, FT 51007549..51007686,51066787..51066897) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-017" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412054" FT mRNA join(AL138696.16:82628..82706,50963223..50963690, FT 50964334..50964427,50975362..50975502) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-016" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412050 Em:AJ412051" FT mRNA join(51066780..51066897,AL161424.13:11666..11947) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-027" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: ESTs: Em:AA431979.1" FT misc_feature 51075183..51201509 FT /note="annotated region of clone" FT mRNA join(AL158195.11:12361..12454,AL158195.11:37252..37365, FT AL158195.11:114814..114924,51102002..51102200) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-020" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412028 Em:AJ412028.1" FT mRNA join(AL158195.11:12361..12454,AL158195.11:55576..55713, FT 51102002..51102200) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-026" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412063" FT mRNA join(AL158195.11:12361..12454,AL158195.11:37252..37365, FT AL158195.11:55576..55713,AL158195.11:114814..114924, FT 51163611..51163712,AC007304.11:52790..52842) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-006" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412027.1" FT mRNA join(AL158195.11:23389..23529,AL158195.11:23628..23802, FT AL158195.11:26594..26687,AL158195.11:30217..30625, FT AL158195.11:37252..37365,AL158195.11:55576..55713, FT AL158195.11:114814..114924,51102002..51102200, FT 51102316..51102670) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-010" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412032" FT mRNA join(AL158195.11:23389..23529,AL158195.11:23628..23802, FT AL158195.11:26594..26687,AL158195.11:30217..30333, FT AL158195.11:30822..31038,AL158195.11:35140..35292, FT AL158195.11:37252..37365,AL158195.11:55576..55713, FT AL158195.11:114814..114924,51076948..51077016, FT AC007304.11:35477..35799,AC007304.11:57911..58275) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-004" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412031 Em:AJ412053" FT mRNA join(AL157367.15:24552..24742,AL158195.11:12361..12454, FT AL158195.11:37252..37365,AL158195.11:55576..55713, FT 51102002..51102200) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-012" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412040 Em:AJ412043" FT mRNA complement(join(51095069..51095572,51100088..51100143, FT 51101415..51101585)) FT /locus_tag="RP11-175B12.2-001" FT /product="novel protein" FT /note="match: ESTs: Em:BM264234.1" FT mRNA join(AL158195.11:37252..37365,51102002..51102200, FT 51102316..51102670) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-024" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412035" FT mRNA join(AL158195.11:37252..37365,AL158195.11:55576..55713, FT AL158195.11:114814..114924,51107330..51107997) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-021" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412036.1" FT mRNA join(AL158195.11:37252..37365,AL158195.11:55576..55713, FT 51102002..51102200,51107330..51107997) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-025" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412037" FT misc_feature 51124063 FT /note="Clone_left_end: RP11-179K10" FT misc_feature 51138268 FT /note="Clone_right_end: RP11-48H1" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT AL138696.16:91670..91828,AL158195.11:55576..55713, FT AL158195.11:80166..80276,51102002..51102200) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-009" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412056" FT mRNA join(AL137060.13:75630..76016,AL158195.11:37252..37365, FT AL158195.11:55576..55713,51102002..51102200) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-019" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412026" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT AL158195.11:12361..12454,AL158195.11:55576..55713, FT AL158195.11:114814..114924,51102002..51102200) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-023" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412055.1" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT AL158195.11:12361..12454,AL158195.11:37252..37365, FT AL158195.11:55576..55713,51102316..51102670) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-001" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412057" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT AL158195.11:37252..37365,AL158195.11:55576..55713, FT AL158195.11:114814..114924,51102316..51102670) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-002" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412058" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT AL158195.11:12361..12454,AL158195.11:37252..37365, FT AL158195.11:55576..55713,AL158195.11:114814..114924, FT 51102002..51102200,51102316..51102670) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-003" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412059 Em:AJ412061" FT mRNA join(AL137060.13:75630..76016,AL137060.13:150286..151535, FT AL158195.11:55576..55713,AL158195.11:114814..114924, FT 51102002..51102200,51102316..51102670) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-005" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412060" FT mRNA join(AL137060.13:75630..76016,AL137060.13:76601..76653, FT AL158195.11:12361..12454,AL158195.11:37252..37365, FT AL158195.11:55576..55713,51102002..51102670) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-007" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412039 Em:AJ412062" FT mRNA join(AL158195.11:114807..114924,51086748..51087029) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-027" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: ESTs: Em:AA431979.1" FT misc_feature 51201409 FT /note="Clone_right_end: RP11-175B12" FT misc_feature 51290142..51430617 FT /note="annotated region of clone" FT misc_feature 51301235..51301481 FT /note="Sequence from overlapping clone bA405M22 (AL590066). FT Assembly confirmed by restriction digest data" FT mRNA join(AL158195.11:12361..12454,AL158195.11:37252..37365, FT AL158195.11:55576..55713,51293783..51293846, FT 51297275..51297372,51297658..51298199) FT /gene="DLEU1" FT /locus_tag="RP11-175B12.1-032" FT /product="deleted in lymphocytic leukemia, 1" FT /note="match: cDNAs: Em:AJ412029.1" FT misc_feature 51355618 FT /note="Clone_left_end: RP11-405M22" FT mRNA join(51381992..51382122,51382676..51382843, FT 51414093..51414230,51422673..51423145) FT /locus_tag="RP11-233H19.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BM454738.1" FT mRNA complement(join(51397161..51397656,51417324..51417611)) FT /locus_tag="RP11-233H19.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BB650000.1 Em:BF567548.1 FT Em:BF780996.1 Em:BI823430.1" FT misc_feature 51429547 FT /note="Clone_right_end: RP11-40A8" FT misc_feature 51430618..51573841 FT /note="annotated region of clone" FT misc_feature 51444529 FT /note="Clone_right_end: RP11-233H19" FT misc_feature 51449943..51450008 FT /note="Single clone region. Region contains reads from FT clone pcr only (oligos 1&2). Assembly is consistent with FT restriction digest" FT mRNA join(51483814..51484276,51501543..51501614, FT 51503611..51503718,51504819..51504895,51509021..51509135, FT 51517457..51517530,51519563..51519668,51522123..51522204, FT 51523599..51523641,51528041..51528121,51530494..51530866) FT /gene="RNASEH2B" FT /locus_tag="RP11-40A8.1-001" FT /product="ribonuclease H2, subunit B" FT /note="match: ESTs: Em:AI200850.1 Em:BQ016444.1" FT /note="match: cDNAs: Em:AK021774.1 Em:AK223340.1 FT Em:AY764036.1 Em:CR602872.1" FT mRNA join(51483927..51484276,51487131..51487265, FT 51501541..51501602) FT /gene="RNASEH2B" FT /locus_tag="RP11-40A8.1-002" FT /product="ribonuclease H2, subunit B" FT /note="match: ESTs: Em:BM847956.1" FT mRNA join(51483939..51484041,51487129..51487265, FT 51501541..51501614,51503611..51503718,51504819..51504895, FT 51517457..51517519) FT /gene="RNASEH2B" FT /locus_tag="RP11-40A8.1-005" FT /product="ribonuclease H2, subunit B" FT /note="match: ESTs: Em:BI753018.1" FT CDS join(51484213..51484276,51501543..51501614, FT 51503611..51503718,51504819..51504895,51509021..51509135, FT 51517457..51517530,51519563..51519668,51522123..51522204, FT 51523599..51523641,51528041..51528121,51530494..51530610) FT /gene="RNASEH2B" FT /locus_tag="RP11-40A8.1-001" FT /standard_name="OTTHUMP00000018436" FT /product="ribonuclease H2, subunit B" FT /note="match: proteins: Sw:Q5TBB1.1 Tr:Q9HAF7.1" FT /protein_id="CAI13913.1" FT /translation="MAAGVDCGDGVGARQHVFLVSEYLKDASKKMKNGLMFVKLVNPCS FT GEGAIYLFNMCLQQLFEVKVFKEKHHSWFINQSVQSGGLLHFATPVDPLFLLLHYLIKA FT DKEGKFQPLDQVVVDNVFPNCILLLKLPGLEKLLHHVTEEKGNPEIDNKKYYKYSKEKT FT LKWLEKKVNQTVAALKTNNVNVSSRVQSTAFFSGDQASTDKEEDYIRYAHGLISDYIPK FT ELSDDLSKYLKLPEPSASLPNPPSKKIKLSDEPVEAKEDYTKFNTKDLKTEKKNSKMTA FT AQKALAKVDKSGMKSIDTFFGVKNKKKIGKV" FT mRNA complement(join(51456514..51456781,51463745..51463871, FT 51484619..51484848)) FT /locus_tag="RP11-40A8.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BF574759.1" FT mRNA complement(join(51568769..51568947,AL160157.17:4648..4971, FT AL160157.17:7095..7304,AL160157.17:7385..7536, FT AL160157.17:10468..10622,AL160157.17:16576..16722, FT AL160157.17:17311..17459,AL160157.17:20793..21113, FT AL160157.17:24495..24711,AL160157.17:25729..25832, FT AL160157.17:27097..27208,AL160157.17:28603..28799, FT AL160157.17:29989..30088,AL160157.17:34398..34554, FT AL160157.17:48615..48709,AL160157.17:63216..63289, FT AL160157.17:66346..66401)) FT /gene="GUCY1B2" FT /locus_tag="RP11-40A8.2-001" FT /product="guanylate cyclase 1, soluble, beta 2" FT /note="match: cDNAs: Em:AF038499.2" FT misc_feature 51499896 FT /note="Clone_left_end: RP11-547C18" FT mRNA join(51502498..51502644,51503611..51503718, FT 51504819..51504895,51509021..51509135,51517457..51517530, FT 51519563..51519668,51523597..51523641,51528041..51528121) FT /gene="RNASEH2B" FT /locus_tag="RP11-40A8.1-004" FT /product="ribonuclease H2, subunit B" FT /note="match: ESTs: Em:BM559965.1" FT mRNA join(51504250..51504291,51504819..51504895, FT 51517457..51517530,51519563..51519650) FT /gene="RNASEH2B" FT /locus_tag="RP11-40A8.1-003" FT /product="ribonuclease H2, subunit B" FT /note="match: ESTs: Em:BE972426.1" FT mRNA join(51523618..51523641,51524207..51524454, FT 51528041..51528121,51530494..51530638) FT /gene="RNASEH2B" FT /locus_tag="RP11-40A8.1-006" FT /product="ribonuclease H2, subunit B" FT /note="match: ESTs: Em:AW439381.1" FT polyA_signal 51530620..51530625 FT polyA_site 51530639 FT polyA_signal 51530877..51530882 FT polyA_site 51530897 FT polyA_site complement(51568647) FT polyA_signal complement(51568667..51568672) FT misc_feature 51573741 FT /note="Clone_right_end: RP11-40A8" FT misc_feature 51573842..51700968 FT /note="annotated region of clone" FT mRNA complement(join(51578389..51578490,51580836..51581045, FT 51581126..51581277,51581930..51581996)) FT /gene="GUCY1B2" FT /locus_tag="RP11-40A8.2-002" FT /product="guanylate cyclase 1, soluble, beta 2" FT /note="match: ESTs: Em:BF876711.1" FT CDS complement(join(51590302..51590463,51591052..51591200, FT 51594534..51594854,51598236..51598452,51599470..51599573, FT 51600838..51600949,51603730..51603822)) FT /gene="GUCY1B2" FT /locus_tag="RP11-40A8.2-004" FT /standard_name="OTTHUMP00000178642" FT /product="guanylate cyclase 1, soluble, beta 2" FT /protein_id="CAI15432.2" FT /translation="MHHRFVWREEQMGKCFSITTRIEVVCATLYQALQAAFLKMKEKYL FT NVSACPVKKSHWDVVRSIVMFGKGHLMNTFEPIYPERLWIEEKTFCNAFPFHIVFDESL FT QVKQARVNIQKYVPGLQTQNIQLDEYFSIIHPQVTFNIFSIRRFINSQFVLKTRREMMP FT VAWQSRTTLKLQGQMIWMESMWCMVYLCSPKLRSLQELEELNMHLSDIAPNDTTRDLIL FT LNQQRLAEIELSNQLERKKEELQVLSKHLAIEKKKTETLLYAMLPKHVANQLREGKKVA FT AGEFKSCTILFSDVVTFTNICTACEPIQIVNVLNSMYSKFDRLTSVHAVYKVETIGDAY FT MVVGGVPVPIGNHAQRVANFALGMRISAKEVTNPVTGEPIQVESN" FT mRNA complement(join(51589552..51590463,51591052..51591200, FT 51594534..51594854,51598236..51598452,51599470..51599573, FT 51600838..51600949,51603730..51603829,51622356..51622450, FT 51636957..51637030,51640087..51640343)) FT /gene="GUCY1B2" FT /locus_tag="RP11-40A8.2-004" FT /product="guanylate cyclase 1, soluble, beta 2" FT /note="match: cDNAs: Em:CR615161.1" FT mRNA complement(join(AL137881.12:138252..138430, FT 51578389..51578712,51580836..51581045,51581126..51581277, FT 51584209..51584363,51590317..51590463,51591052..51591200, FT 51594534..51594854,51598236..51598452,51599470..51599573, FT 51600838..51600949,51602344..51602540,51603730..51603829, FT 51608139..51608295,51622356..51622450,51636957..51637030, FT 51640087..51640142)) FT /gene="GUCY1B2" FT /locus_tag="RP11-40A8.2-001" FT /product="guanylate cyclase 1, soluble, beta 2" FT /note="match: cDNAs: Em:AF038499.2" FT mRNA join(51657937..51658461,51659455..51659535) FT /locus_tag="RP11-547C18.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AL040612.1 Em:AL040615.1" FT misc_feature 51672279..51672611 FT /note="Single clone region. Sequence from reads from a FT short insert library derived form a single pUC FT clone.Restriction digest data confirm the assembly" FT mRNA complement(join(51659560..51659695,51662064..51662211, FT 51684932..51685078)) FT /locus_tag="RP11-547C18.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:DV080333.1 Em:DV080334.1" FT misc_feature 51700868 FT /note="Clone_right_end: RP11-547C18" FT misc_feature 51701063..51877110 FT /note="annotated region of clone" FT CDS complement(51735859..51736493) FT /pseudo FT /locus_tag="RP11-457D13.1-001" FT /product="RPL5 (60S ribosomal protein 5) pseudogene" FT /note="match: proteins: Sw:O22608 Sw:O44248 Sw:O59953 FT Sw:O65353 Sw:O76190 Sw:P09895 Sw:P15125 Sw:P15126 Sw:P22451 FT Sw:P26321 Sw:P46777 Sw:P49405 Sw:Q26481 Tr:Q9W5R8 FT Tr:Q9Y0H6" FT mRNA join(51796503..51796705,51805484..51805515, FT 51825604..51826337,51854586..51857930) FT /gene="FAM124A" FT /locus_tag="RP11-457D13.2-001" FT /product="family with sequence similarity 124A" FT /note="match: ESTs: Em:AI471639.1 Em:AI613106.1 FT Em:AW207167.1 Em:BM684001.1" FT /note="match: cDNAs: Em:AK055269.1 Em:AY358177.1 FT Em:BC051771.1" FT mRNA join(51796507..51796705,51805484..51805515, FT 51819448..51819555,51825604..51826337,51854586..51855616) FT /gene="FAM124A" FT /locus_tag="RP11-457D13.2-003" FT /product="family with sequence similarity 124A" FT /note="match: cDNAs: Em:AK096364.1" FT mRNA join(51796513..51796705,51799257..51799492, FT 51801391..51801565) FT /gene="FAM124A" FT /locus_tag="RP11-457D13.2-002" FT /product="family with sequence similarity 124A" FT /note="match: ESTs: Em:BI521123.1" FT CDS join(51796638..51796705,51805484..51805515, FT 51825604..51826337,51854586..51855392) FT /gene="FAM124A" FT /locus_tag="RP11-457D13.2-001" FT /standard_name="OTTHUMP00000018438" FT /product="family with sequence similarity 124A" FT /note="match: proteins: Sw:Q5RA50.1 Sw:Q86V42.1 FT Tr:Q96NJ9.1" FT /protein_id="CAI14260.1" FT /translation="MDPKAGGGGEEDDCVDSGAETGGSDYSHLSSTSSELSVEEAQDPF FT LVSIHIIADPGESQPLQEAIDNVLAWIHPDLPLFRVSERRASRRRRKPPKGAQPALAVV FT LFLQEEYGEEQILQLHRTLQQPPWRHHHTEQVHGRFLPYLPCSQDFFTLAPGTPLWAIR FT PVHYGKEIVRFTVYCRYDNYADSLRFYQLILRRSPSQKKADFCIFPIFSNLDVDIQFSL FT KRLPCDQCPVPTDSSVLEFRVRDIGELVPLLPNPCSPISEGRWQTEDHDGNKILLQAQR FT VHKKFPKPGRVHHASEKKRHSTPLPSTAVPSHTPGSSQQSPLNSPHPGPIRTGLPPGHQ FT QEFAGRANSTPNPPWSFQRSKSLFCLPTGGPSLASSAEPQWFSNTGAPGHRASEWRHGH FT LLSIDDLEGAQETDVDTGLRLSSSDLSVVSAYSAPSRFCSTVETPLPSERCSSHWAAHK FT DSREGPLPTVSRVTTEASWASLPFFTKRSSSSSATARAAPPAPSTSTLTDSSPQLPCDT FT PKVKQTDGDMPPPPGSAGPGDNDMEEFYI" FT CDS join(51796638..51796705,51805484..51805515, FT 51819448..51819555,51825604..51826337,51854586..51855392) FT /gene="FAM124A" FT /locus_tag="RP11-457D13.2-003" FT /standard_name="OTTHUMP00000178643" FT /product="family with sequence similarity 124A" FT /note="match: proteins: Tr:Q8N8P9.1" FT /protein_id="CAM20007.1" FT /translation="MDPKAGGGGEEDDCVDSGAETGGSDYSHLSSTSNGFSTWRMPCCL FT FLYCTHGDKEKGRWSLQVEHTWPSGELSVEEAQDPFLVSIHIIADPGESQPLQEAIDNV FT LAWIHPDLPLFRVSERRASRRRRKPPKGAQPALAVVLFLQEEYGEEQILQLHRTLQQPP FT WRHHHTEQVHGRFLPYLPCSQDFFTLAPGTPLWAIRPVHYGKEIVRFTVYCRYDNYADS FT LRFYQLILRRSPSQKKADFCIFPIFSNLDVDIQFSLKRLPCDQCPVPTDSSVLEFRVRD FT IGELVPLLPNPCSPISEGRWQTEDHDGNKILLQAQRVHKKFPKPGRVHHASEKKRHSTP FT LPSTAVPSHTPGSSQQSPLNSPHPGPIRTGLPPGHQQEFAGRANSTPNPPWSFQRSKSL FT FCLPTGGPSLASSAEPQWFSNTGAPGHRASEWRHGHLLSIDDLEGAQETDVDTGLRLSS FT SDLSVVSAYSAPSRFCSTVETPLPSERCSSHWAAHKDSREGPLPTVSRVTTEASWASLP FT FFTKRSSSSSATARAAPPAPSTSTLTDSSPQLPCDTPKVKQTDGDMPPPPGSAGPGDND FT MEEFYI" FT misc_feature 51824593 FT /note="Clone_left_end: RP11-24B19" FT polyA_signal 51855594..51855599 FT polyA_site 51855622 FT polyA_signal 51858353..51858358 FT polyA_site 51858375 FT misc_feature 51877010 FT /note="Clone_right_end: RP11-457D13" FT misc_feature 51877111..51986625 FT /note="annotated region of clone" FT misc_feature 51883340 FT /note="Clone_right_end: RP11-512A18" FT mRNA complement(join(51976665..51976939, FT AL354820.18:10619..10845,AL354820.18:12541..12601)) FT /gene="INTS6" FT /locus_tag="RP11-24B19.2-004" FT /product="integrator complex subunit 6" FT /note="match: ESTs: Em:AI806186.1" FT mRNA join(51909909..51910005,51913447..51913879, FT 51914920..51914997,51915211..51915395) FT /locus_tag="RP11-24B19.1-002" FT /product="Serpin (serine protease inhibitor) pseudogene" FT /note="match: ESTs: Em:DW009938.1 Em:DW009939.1" FT mRNA join(51915312..51915483,51918388..51918621, FT 51921161..51921370,51922349..51922547,51929179..51929279, FT 51935414..51935500,51935946..51936058) FT /locus_tag="RP11-24B19.1-001" FT /product="Serpin (serine protease inhibitor) pseudogene" FT mRNA complement(join(51939363..51939981,51941941..51942034, FT 51943075..51943446,51948344..51948575,51948790..51948932, FT 51950184..51950310,51952375..51952590,51953598..51953708, FT 51956165..51956259,51957465..51957597,51957725..51957877, FT 51961522..51961676,51963455..51963580,51969436..51969619, FT AL354820.18:19805..19894,AL354820.18:40536..40685, FT AL354820.18:41489..41566,AL354820.18:41926..42509)) FT /gene="INTS6" FT /locus_tag="RP11-24B19.2-001" FT /product="integrator complex subunit 6" FT /note="match: cDNAs: Em:AF097645.1 Em:AK074946.1 FT Em:BC013358.2 Em:BC039829.1" FT /note="match: ESTs: Em:AI246882.1 Em:AI741381.1 FT Em:BM684547.1 Em:BQ009083.1 Em:BU737283.1 Em:BU754174.1" FT CDS complement(join(51939888..51939981,51941941..51942034, FT 51943075..51943446,51948344..51948575,51948790..51948932, FT 51950184..51950310,51952375..51952590,51953598..51953708, FT 51956165..51956259,51957465..51957597,51957725..51957877, FT 51961522..51961676,51963455..51963580,51969436..51969619, FT AL354820.18:19805..19894,AL354820.18:40536..40685, FT AL354820.18:41489..41566,AL354820.18:41926..42036)) FT /gene="INTS6" FT /locus_tag="RP11-24B19.2-001" FT /standard_name="OTTHUMP00000018439" FT /product="integrator complex subunit 6" FT /note="match: proteins: Sw:Q9UL03.1" FT /protein_id="CAI12905.1" FT /translation="MPILLFLIDTSASMNQRSHLGTTYLDTAKGAVETFMKLRARDPAS FT RGDRYMLVTFEEPPYAIKAGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRL FT VTGIDNYGQGRNPFFLEPAIIITITDGSKLTTTSGVQDELHLPLNSPLPGSELTKEPFR FT WDQRLFALVLRLPGTMSVESEQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQCLES FT LVQKVQSGVVINFEKAGPDPSPVEDGQPDISRPFGSQPWHSCHKLIYVRPNPKTGVPIG FT HWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPLTQFILE FT RKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDLFKV FT HKAKPTLKWRQSFESYLKTMPPYYLGPLKKAVRMMGAPNLIADSMEYGLSYSVISYLKK FT LSQQAKIESDRVIGSVGKKVVQETGIKVRSRSHGLSMAYRKDFQQLLQGISEDVPHRLL FT DLNMKEYTGFQVALLNKDLKPQTFRNAYDIPRRNLLDHLTRMRSNLLKSTRRFLKGQDE FT DQVHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFV FT AGPQNKHKRPGEPNMQGIPKRRRCMSPLLRGRQQNPVVNNHIGGKGPPAPTTQAQPDLI FT KPLPLHKISETTNDSIIHDVVENHVADQLSSDITPNAMDTEFSASSPASLLERPTNHME FT ALGHDHLGTNDLTVGGFLENHEEPRDKEQCAEENIPASSLNKGKKLMHCRSHEEVNTEL FT KAQIMKEIRKPGRKYERIFTLLKHVQGSLQTRLIFLQNVIKEASRFKKRMLIEQLENFL FT DEIHRRANQINHINSN" FT polyA_site complement(51935701) FT polyA_signal complement(51935730..51935735) FT polyA_site complement(51935772) FT polyA_signal complement(51935790..51935795) FT polyA_site complement(51936795) FT polyA_signal complement(51936824..51936829) FT polyA_site complement(51939363) FT polyA_signal complement(51939375..51939380) FT misc_feature 51952496 FT /note="Clone_left_end: RP11-550E22" FT mRNA complement(join(51956165..51956259,51957465..51957597, FT 51957725..51957877,51958509..51958831)) FT /gene="INTS6" FT /locus_tag="RP11-24B19.2-005" FT /product="integrator complex subunit 6" FT /note="match: ESTs: Em:BG723467.1" FT mRNA complement(join(51957472..51957597,51957725..51957877, FT 51958880..51959361)) FT /gene="INTS6" FT /locus_tag="RP11-24B19.2-006" FT /product="integrator complex subunit 6" FT /note="match: ESTs: Em:BI561247.1" FT misc_feature 51985625 FT /note="Clone_right_end: RP11-24B19" FT misc_feature 51986626..52150612 FT /note="annotated region of clone" FT mRNA complement(join(AL137780.10:100555..100829, FT 51995244..51995470,51997166..51997226)) FT /gene="INTS6" FT /locus_tag="RP11-24B19.2-004" FT /product="integrator complex subunit 6" FT /note="match: ESTs: Em:AI806186.1" FT mRNA complement(join(51997139..51997226,52004430..52004519, FT 52025161..52025310,52026114..52026387)) FT /gene="INTS6" FT /locus_tag="RP11-24B19.2-002" FT /product="integrator complex subunit 6" FT /note="match: ESTs: Em:BE972640.1" FT mRNA complement(join(52024342..52025310,52026114..52026191, FT 52026551..52027151)) FT /gene="INTS6" FT /locus_tag="RP11-24B19.2-003" FT /product="integrator complex subunit 6" FT /note="match: cDNAs: Em:BC018725.1" FT mRNA complement(join(AL137780.10:63253..63871, FT AL137780.10:65831..65924,AL137780.10:66965..67336, FT AL137780.10:72234..72465,AL137780.10:72680..72822, FT AL137780.10:74074..74200,AL137780.10:76265..76480, FT AL137780.10:77488..77598,AL137780.10:80055..80149, FT AL137780.10:81355..81487,AL137780.10:81615..81767, FT AL137780.10:85412..85566,AL137780.10:87345..87470, FT AL137780.10:93326..93509,52004430..52004519, FT 52025161..52025310,52026114..52026191,52026551..52027134)) FT /gene="INTS6" FT /locus_tag="RP11-24B19.2-001" FT /product="integrator complex subunit 6" FT /note="match: cDNAs: Em:AF097645.1 Em:AK074946.1 FT Em:BC013358.2 Em:BC039829.1" FT /note="match: ESTs: Em:AI246882.1 Em:AI741381.1 FT Em:BM684547.1 Em:BQ009083.1 Em:BU737283.1 Em:BU754174.1" FT CDS complement(join(AL137780.10:63778..63871, FT AL137780.10:65831..65924,AL137780.10:66965..67336, FT AL137780.10:72234..72465,AL137780.10:72680..72822, FT AL137780.10:74074..74200,AL137780.10:76265..76480, FT AL137780.10:77488..77598,AL137780.10:80055..80149, FT AL137780.10:81355..81487,AL137780.10:81615..81767, FT AL137780.10:85412..85566,AL137780.10:87345..87470, FT AL137780.10:93326..93509,52004430..52004519, FT 52025161..52025310,52026114..52026191,52026551..52026661)) FT /gene="INTS6" FT /locus_tag="RP11-24B19.2-001" FT /standard_name="OTTHUMP00000018439" FT /product="integrator complex subunit 6" FT /note="match: proteins: Sw:Q9UL03.1" FT /protein_id="CAI15586.1" FT /translation="MPILLFLIDTSASMNQRSHLGTTYLDTAKGAVETFMKLRARDPAS FT RGDRYMLVTFEEPPYAIKAGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRL FT VTGIDNYGQGRNPFFLEPAIIITITDGSKLTTTSGVQDELHLPLNSPLPGSELTKEPFR FT WDQRLFALVLRLPGTMSVESEQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQCLES FT LVQKVQSGVVINFEKAGPDPSPVEDGQPDISRPFGSQPWHSCHKLIYVRPNPKTGVPIG FT HWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPLTQFILE FT RKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDLFKV FT HKAKPTLKWRQSFESYLKTMPPYYLGPLKKAVRMMGAPNLIADSMEYGLSYSVISYLKK FT LSQQAKIESDRVIGSVGKKVVQETGIKVRSRSHGLSMAYRKDFQQLLQGISEDVPHRLL FT DLNMKEYTGFQVALLNKDLKPQTFRNAYDIPRRNLLDHLTRMRSNLLKSTRRFLKGQDE FT DQVHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEADEFV FT AGPQNKHKRPGEPNMQGIPKRRRCMSPLLRGRQQNPVVNNHIGGKGPPAPTTQAQPDLI FT KPLPLHKISETTNDSIIHDVVENHVADQLSSDITPNAMDTEFSASSPASLLERPTNHME FT ALGHDHLGTNDLTVGGFLENHEEPRDKEQCAEENIPASSLNKGKKLMHCRSHEEVNTEL FT KAQIMKEIRKPGRKYERIFTLLKHVQGSLQTRLIFLQNVIKEASRFKKRMLIEQLENFL FT DEIHRRANQINHINSN" FT mRNA join(52028283..52028465,52123846..52124128) FT /locus_tag="RP11-550E22.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA397528.1" FT CDS 52034661..52035532 FT /pseudo FT /locus_tag="RP11-550E22.4-001" FT /product="ribosomal protein S4, X-linked (RPS4X) FT pseudogene" FT /note="match: proteins: Sw:P22090 Sw:P62701 Sw:P62702 FT Sw:P62703 Sw:P79183 Tr:Q545X8 Tr:Q8SRB9 Tr:Q95V34" FT CDS complement(52070156..52070387) FT /pseudo FT /locus_tag="RP11-550E22.5-001" FT /product="small nuclear ribonucleoprotein polypeptide G FT pseudogene" FT /note="match: proteins: Sw:P62308 Sw:P62309" FT misc_feature 52101167 FT /note="Clone_left_end: RP11-39N8" FT misc_feature 52148612 FT /note="Clone_right_end: RP11-550E22" FT misc_feature 52150613..52199960 FT /note="annotated region of clone" FT mRNA join(52158644..52158960,AL136525.17:34872..34939, FT AL136525.17:49446..49519,AL136525.17:77872..77926, FT AL136525.17:93474..93624,AL136525.17:101954..102066, FT AL136525.17:113325..113451,AL136525.17:125586..125691, FT AL136525.17:129634..129735,AL136525.17:130608..130738, FT AL136525.17:132468..132576,AL136525.17:134016..134275) FT /gene="WDFY2" FT /locus_tag="RP11-147H23.1-001" FT /product="WD repeat and FYVE domain containing 2" FT /note="match: cDNAs: Em:AF411978.1 Em:BC014004.2" FT /note="match: ESTs: Em:AI240613.1 Em:BQ574560.1 FT Em:CA308078.1 Em:CA412501.1" FT CDS join(52158824..52158960,AL136525.17:34872..34939, FT AL136525.17:49446..49519,AL136525.17:77872..77926, FT AL136525.17:93474..93624,AL136525.17:101954..102066, FT AL136525.17:113325..113451,AL136525.17:125586..125691, FT AL136525.17:129634..129735,AL136525.17:130608..130738, FT AL136525.17:132468..132576,AL136525.17:134016..134045) FT /gene="WDFY2" FT /locus_tag="RP11-147H23.1-001" FT /standard_name="OTTHUMP00000018795" FT /product="WD repeat and FYVE domain containing 2" FT /note="match: proteins: Sw:Q8BUB4.1 Sw:Q96P53.2 Tr:Q3U9F3.1 FT Tr:Q568X4.1 Tr:Q5W0C0.1 Tr:Q5ZL44.1 Tr:Q6TLF1.1" FT /protein_id="CAH73431.1" FT /translation="MAAEIQPKPLTRKPILLQRMEGSQEVVNMAVIVPKEEGVISVSED FT RTVRVWLKRDSGQYWPSVYHAMPSPCSCMSFNPETRRLSIGLDNGTISEFILSEDYNKM FT TPVKNYQAHQSRVTMILFVLELEWVLSTGQDKQFAWHCSESGQRLGGYRTSAVASGLQF FT DVETRHVFIGDHSGQVTILKLEQENCTLVTTFRGHTGGVTALCWDPVQRVLFSGSSDHS FT VIMWDIGGRKGTAIELQGHNDRVQALSYAQHTRQLISCGGDGGIVVWNMDVERQETPEW FT LDSDSCQKCDQPFFWNFKQMWDSKKIGLRQHHCRKCGKAVCGKCSSKRSSIPLMGFEFE FT VRVCDSCHEAITDEERAPTATFHDSKHNIVHVHFDATRGWLLTSGTDKVIKLWDMTPVV FT S" FT CDS 52172542..52173930 FT /pseudo FT /locus_tag="RP11-39N8.2-001" FT /product="ATP synthase pseudogene" FT /note="match: proteins: Sw:P24539" FT mRNA complement(join(52195049..52195360,52197260..52197358)) FT /locus_tag="RP11-39N8.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:W92796.1" FT misc_feature 52199761 FT /note="Clone_left_end: RP11-147H23" FT misc_feature 52199961..52345200 FT /note="annotated region of clone" FT mRNA join(AL139183.8:8132..8448,52234732..52234799, FT 52249306..52249379,52277732..52277786,52293334..52293484, FT 52301814..52301926,52313185..52313311,52325446..52325551, FT 52329494..52329595,52330468..52330598,52332328..52332436, FT 52333876..52334135) FT /gene="WDFY2" FT /locus_tag="RP11-147H23.1-001" FT /product="WD repeat and FYVE domain containing 2" FT /note="match: cDNAs: Em:AF411978.1 Em:BC014004.2" FT /note="match: ESTs: Em:AI240613.1 Em:BQ574560.1 FT Em:CA308078.1 Em:CA412501.1" FT CDS join(AL139183.8:8312..8448,52234732..52234799, FT 52249306..52249379,52277732..52277786,52293334..52293484, FT 52301814..52301926,52313185..52313311,52325446..52325551, FT 52329494..52329595,52330468..52330598,52332328..52332436, FT 52333876..52333905) FT /gene="WDFY2" FT /locus_tag="RP11-147H23.1-001" FT /standard_name="OTTHUMP00000018795" FT /product="WD repeat and FYVE domain containing 2" FT /note="match: proteins: Sw:Q8BUB4.1 Sw:Q96P53.2 Tr:Q3U9F3.1 FT Tr:Q568X4.1 Tr:Q5W0C0.1 Tr:Q5ZL44.1 Tr:Q6TLF1.1" FT /protein_id="CAH70585.1" FT /translation="MAAEIQPKPLTRKPILLQRMEGSQEVVNMAVIVPKEEGVISVSED FT RTVRVWLKRDSGQYWPSVYHAMPSPCSCMSFNPETRRLSIGLDNGTISEFILSEDYNKM FT TPVKNYQAHQSRVTMILFVLELEWVLSTGQDKQFAWHCSESGQRLGGYRTSAVASGLQF FT DVETRHVFIGDHSGQVTILKLEQENCTLVTTFRGHTGGVTALCWDPVQRVLFSGSSDHS FT VIMWDIGGRKGTAIELQGHNDRVQALSYAQHTRQLISCGGDGGIVVWNMDVERQETPEW FT LDSDSCQKCDQPFFWNFKQMWDSKKIGLRQHHCRKCGKAVCGKCSSKRSSIPLMGFEFE FT VRVCDSCHEAITDEERAPTATFHDSKHNIVHVHFDATRGWLLTSGTDKVIKLWDMTPVV FT S" FT CDS complement(join(52343260..52343429,AL162377.10:857..947, FT AL162377.10:2966..3070,AL162377.10:6096..6157, FT AL162377.10:19047..19128,AL162377.10:20201..20293, FT AL162377.10:28570..28695)) FT /gene="DHRS12" FT /locus_tag="RP11-147H23.2-001" FT /standard_name="OTTHUMP00000018441" FT /product="dehydrogenase/reductase (SDR family) member 12" FT /note="match: proteins: Tr:Q9H8H1.1" FT /protein_id="CAH70586.1" FT /translation="MNLHVKTLSLMTWRSRFLEESFWSLEETAALAKQLPLKSPSENIF FT LHIVDLSDPKQIWKFVENFKQEHKLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYI FT LTTGLIPVLEKEHDPRVITVSSGGMLVQKLNTNDLQSERTPFDGTMVYAQNKRQQVVLT FT ERWAQGHPAIHFSSMHPGWADTPGVRQAMPGFHARFGDRLRSEAQGADTMLWLALSSAA FT AAQPSGRFFQGDFLPGCEGS" FT mRNA complement(join(52342129..52342432,52343292..52343434, FT AL162377.10:857..947,AL162377.10:2966..3070, FT AL162377.10:6096..6157,AL162377.10:19047..19128, FT AL162377.10:20201..20293,AL162377.10:26862..26944, FT AL162377.10:28570..28703,AL162377.10:33090..33159)) FT /gene="DHRS12" FT /locus_tag="RP11-147H23.2-002" FT /product="dehydrogenase/reductase (SDR family) member 12" FT /note="match: cDNAs: Em:BC026024.1" FT mRNA complement(join(52342131..52343429,AL162377.10:857..947, FT AL162377.10:2966..3070,AL162377.10:6096..6157, FT AL162377.10:19047..19128,AL162377.10:20201..20293, FT AL162377.10:28570..28703,AL162377.10:33090..33193)) FT /gene="DHRS12" FT /locus_tag="RP11-147H23.2-001" FT /product="dehydrogenase/reductase (SDR family) member 12" FT /note="match: cDNAs: Em:AK023701.1" FT /note="match: ESTs: Em:AA831151.1 Em:BM674055.1 FT Em:BM989818.1 Em:BQ446223.1 Em:CB306433.1" FT mRNA join(52313284..52313311,52325446..52325551, FT 52327004..52327259) FT /gene="WDFY2" FT /locus_tag="RP11-147H23.1-002" FT /product="WD repeat and FYVE domain containing 2" FT /note="match: ESTs: Em:AA157443.1" FT polyA_signal 52334109..52334114 FT polyA_site 52334135 FT polyA_signal 52334587..52334592 FT polyA_site 52334624 FT polyA_signal 52336149..52336154 FT polyA_site 52336171 FT polyA_site complement(52342129) FT polyA_signal complement(52342162..52342167) FT misc_feature 52345001 FT /note="Clone_left_end: RP11-327P2" FT misc_feature 52345201..52514204 FT /note="annotated region of clone" FT misc_feature 52350251..52350502 FT /note="Sequence from overlapping clone bA147H23 (AL136525). FT Assembly confirmed by restriction digest" FT mRNA complement(join(52345957..52346047,52348057..52348170, FT 52351196..52351257,52351379..52351519)) FT /gene="DHRS12" FT /locus_tag="RP11-147H23.2-004" FT /product="dehydrogenase/reductase (SDR family) member 12" FT /note="match: ESTs: Em:AV722563.1" FT mRNA complement(join(52345957..52346047,52348066..52348170, FT 52350593..52350661,52351196..52351257,52364147..52364212)) FT /gene="DHRS12" FT /locus_tag="RP11-147H23.2-006" FT /product="dehydrogenase/reductase (SDR family) member 12" FT /note="match: ESTs: Em:AI024367.1" FT mRNA complement(join(52346902..52347169,52348066..52348170, FT 52351196..52351257,52364147..52364198)) FT /gene="DHRS12" FT /locus_tag="RP11-147H23.2-005" FT /product="dehydrogenase/reductase (SDR family) member 12" FT /note="match: ESTs: Em:AI939498.1" FT CDS complement(join(AL136525.17:143400..143569, FT 52345957..52346047,52348066..52348170,52351196..52351257, FT 52364147..52364228,52365301..52365393,52373670..52373795)) FT /gene="DHRS12" FT /locus_tag="RP11-147H23.2-001" FT /standard_name="OTTHUMP00000018441" FT /product="dehydrogenase/reductase (SDR family) member 12" FT /note="match: proteins: Tr:Q9H8H1.1" FT /protein_id="CAI13427.1" FT /translation="MNLHVKTLSLMTWRSRFLEESFWSLEETAALAKQLPLKSPSENIF FT LHIVDLSDPKQIWKFVENFKQEHKLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYI FT LTTGLIPVLEKEHDPRVITVSSGGMLVQKLNTNDLQSERTPFDGTMVYAQNKRQQVVLT FT ERWAQGHPAIHFSSMHPGWADTPGVRQAMPGFHARFGDRLRSEAQGADTMLWLALSSAA FT AAQPSGRFFQGDFLPGCEGS" FT mRNA complement(join(52506809..52509165,52509729..52509831, FT 52511412..52511529,52511612..52511815,52513187..52513329, FT AL138821.12:1113..1256,AL138821.12:2418..2586, FT AL138821.12:4141..4323,AL138821.12:6316..6510, FT AL138821.12:9694..9828,AL138821.12:10039..10193, FT AL138821.12:10304..10431,AL138821.12:17548..17639, FT AL138821.12:18343..18576,AL138821.12:20180..20354, FT AL138821.12:21869..21945,AL138821.12:24904..25065, FT AL138821.12:28476..28639,AL138821.12:30524..30781, FT AL138821.12:33967..35200,AL139082.18:29750..29957)) FT /gene="ATP7B" FT /locus_tag="RP11-327P2.1-002" FT /product="ATPase, Cu++ transporting, beta polypeptide" FT /note="match: ESTs: Em:AI074620 Em:AL041073 Em:AW303610 FT Em:AW664651 Em:BE262569 Em:BF313366 Em:BF314537 Em:BF315943 FT Em:BG329406 Em:BG747093 Em:BI453738 Em:BM834965 Em:BM835109 FT Em:BM835274" FT /note="match: cDNAs: Em:L25591 Em:U03464 Em:U11700" FT CDS complement(join(52508892..52509165,52509729..52509831, FT 52511412..52511529,52511612..52511815,52513187..52513329, FT AL138821.12:1113..1256,AL138821.12:2418..2586, FT AL138821.12:4141..4323,AL138821.12:6316..6510, FT AL138821.12:9694..9828,AL138821.12:10039..10193, FT AL138821.12:10304..10431,AL138821.12:17548..17639, FT AL138821.12:18343..18576,AL138821.12:20180..20354, FT AL138821.12:21869..21945,AL138821.12:24904..25065, FT AL138821.12:28476..28639,AL138821.12:30524..30781, FT AL138821.12:33967..35200,AL139082.18:29750..29800)) FT /gene="ATP7B" FT /locus_tag="RP11-327P2.1-002" FT /standard_name="OTTHUMP00000018794" FT /product="ATPase, Cu++ transporting, beta polypeptide" FT /note="match: proteins: Sw:P35670 Sw:Q64446 Sw:Q64535 FT Sw:Q9XT50 Tr:Q9QUG4 Tr:Q9R0T2" FT /protein_id="CAI13428.1" FT /translation="MPEQERQITAREGASRKILSKLSLPTRAWEPAMKKSFAFDNVGYE FT GGLDGLGPSSQVATSTVRILGMTCQSCVKSIEDRISNLKGIISMKVSLEQGSATVKYVP FT SVVCLQQVCHQIGDMGFEASIAEGKAASWPSRSLPAQEAVVKLRVEGMTCQSCVSSIEG FT KVRKLQGVVRVKVSLSNQEAVITYQPYLIQPEDLRDHVNDMGFEAAIKSKVAPLSLGPI FT DIERLQSTNPKRPLSSANQNFNNSETLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQ FT LLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRS FT SSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTA FT TVLYNPSVISPEELRAAIEDMGFEASVVSESCSTNPLGNHSAGNSMVQTTDGTPTSVQE FT VAPHTGRLPANHAPDILAKSPQSTRAVAPQKCFLQIKGMTCASCVSNIERNLQKEAGVL FT SVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNIELTITGMTCA FT SCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLAQRN FT PNAHHLDHKMEIKQWKKSFLCSLVFGIPVMALMIYMLIPSNEPHQSMVLDHNIIPGLSI FT LNLIFFILCTFVQLLGGWYFYVQAYKSLRHRSANMDVLIVLATSIAYVYSLVILVVAVA FT EKAERSPVTFFDTPPMLFVFIALGRWLEHLAKSKTSEALAKLMSLQATEATVVTLGEDN FT LIIREEQVPMELVQRGDIVKVVPGGKFPVDGKVLEGNTMADESLITGEAMPVTKKPGST FT VIAGSINAHGSVLIKATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIII FT MSTLTLVVWIVIGFIDFGVVQRYFPNPNKHISQTEVIIRFAFQTSITVLCIACPCSLGL FT ATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITHGVPRVMRVLLLGDV FT ATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTETLGYCTDFQAVPGCGIGCKVS FT NVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVS FT DAMTDHEMKGQTAILVAIDGVLCGMIAIADAVKQEAALAVHTLQSMGVDVVLITGDNRK FT TARAIATQVGINKVFAEVLPSHKVAKVQELQNKGKKVAMVGDGVNDSPALAQADMGVAI FT GTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLVLALIYNLVGIPIAAGVF FT MPIGIVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDLERYEAQAHGHMKPLTASQVSV FT HIGMDDRWRDSPRATPWDQVSYVSQVSLSSLTSDKPSRHSAAADDDGDKWSLLLNGRDE FT EQYI" FT mRNA complement(join(52345957..52346047,52348066..52348170, FT 52351196..52351257,52364147..52364228,52365301..52365393, FT 52373670..52373803,52378190..52378293)) FT /gene="DHRS12" FT /locus_tag="RP11-147H23.2-003" FT /product="dehydrogenase/reductase (SDR family) member 12" FT /note="match: ESTs: Em:AU139727.1" FT mRNA complement(join(AL136525.17:142269..142572, FT AL136525.17:143432..143574,52345957..52346047, FT 52348066..52348170,52351196..52351257,52364147..52364228, FT 52365301..52365393,52371962..52372044,52373670..52373803, FT 52378190..52378259)) FT /gene="DHRS12" FT /locus_tag="RP11-147H23.2-002" FT /product="dehydrogenase/reductase (SDR family) member 12" FT /note="match: cDNAs: Em:BC026024.1" FT mRNA complement(join(AL136525.17:142271..143569, FT 52345957..52346047,52348066..52348170,52351196..52351257, FT 52364147..52364228,52365301..52365393,52373670..52373803, FT 52378190..52378293)) FT /gene="DHRS12" FT /locus_tag="RP11-147H23.2-001" FT /product="dehydrogenase/reductase (SDR family) member 12" FT /note="match: ESTs: Em:AA831151.1 Em:BM674055.1 FT Em:BM989818.1 Em:BQ446223.1 Em:CB306433.1" FT /note="match: cDNAs: Em:AK023701.1" FT mRNA join(52378433..52378937,52387293..52387356) FT /locus_tag="RP11-327P2.5-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM021905.1" FT misc_feature 52382331..52382339 FT /note="Sequence from overlapping clone bA147H23 (AL136525). FT Assembly confirmed by restriction digest" FT misc_feature 52391742 FT /note="Clone_right_end: RP11-147H23" FT misc_feature 52393646..52393713 FT /note="Weak data" FT misc_feature 52404037 FT /note="Clone_left_end: RP11-381L18" FT mRNA join(52436117..52436365,52439468..52440366) FT /gene="CCDC70" FT /locus_tag="RP11-327P2.2-001" FT /product="coiled-coil domain containing 70" FT /note="match: ESTs: Em:AA742548.1 Em:AI936608.1" FT /note="match: cDNAs: Em:AK098719.1 Em:AK225745.1 FT Em:AL136887.1" FT CDS 52439515..52440216 FT /gene="CCDC70" FT /locus_tag="RP11-327P2.2-001" FT /standard_name="OTTHUMP00000018440" FT /product="coiled-coil domain containing 70" FT /note="match: proteins: Sw:Q6NSX1.1" FT /protein_id="CAI13430.1" FT /translation="MATPPFRLIRKMFSFKVSRWMGLACFRSLAASSPSIRQKKLMHKL FT QEEKAFREEMKIFREKIEDFREEMWTFRGKIHAFRGQILGFWEEERPFWEEEKTFWKEE FT KSFWEMEKSFREEEKTFWKKYRTFWKEDKAFWKEDNALWERDRNLLQEDKALWEEEKAL FT WVEERALLEGEKALWEDKTSLWEEENALWEEERAFWMENNGHIAGEQMLEDGPHNANRG FT QRLLAFSRGRA" FT polyA_signal 52440336..52440341 FT polyA_site 52440368 FT misc_feature 52442368..52442403 FT /note="Sequence from overlapping clone bA147H23 (AL136525). FT Assembly confirmed by restriction digest" FT misc_feature 52470673..52470779 FT /note="Sequence from overlapping clone bA147H23 (AL136525). FT Assembly confirmed by restriction digest" FT misc_feature 52476516..52476557 FT /note="Sequence from overlapping clone bA147H23 (AL136525). FT Assembly confirmed by restriction digest" FT CDS complement(52482354..52484757) FT /pseudo FT /locus_tag="RP11-327P2.3-001" FT /product="CTAGE family, member 5 (CTAGE5) pseudogene" FT /note="match: proteins: Sw:O15320 Sw:Q96RT6" FT polyA_site complement(52506809) FT polyA_signal complement(52506827..52506832) FT misc_feature 52514205..52555773 FT /note="annotated region of clone" FT mRNA complement(join(52518245..52518427,52520420..52520699)) FT /gene="ATP7B" FT /locus_tag="RP11-327P2.1-005" FT /product="ATPase, Cu++ transporting, beta polypeptide" FT /note="match: ESTs: Em:AW630693.1" FT CDS 52540878..52541285 FT /pseudo FT /locus_tag="RP11-381L18.2-001" FT /product="fatty acid binding protein pseudogene" FT /note="match: proteins: Sw:P55052" FT /db_xref="PSEUDO:CAI13742.1" FT mRNA complement(join(AL162377.10:161709..164065, FT AL162377.10:164629..164731,AL162377.10:166312..166429, FT AL162377.10:166512..166715,AL162377.10:168087..168229, FT 52515217..52515360,52516522..52516690,52518245..52518427, FT 52520420..52520614,52523798..52523932,52524143..52524297, FT 52524408..52524535,52531652..52531743,52532447..52532680, FT 52534284..52534458,52535973..52536049,52539008..52539169, FT 52542580..52542743,52544628..52544885,52548071..52549304, FT AL139082.18:29750..29957)) FT /gene="ATP7B" FT /locus_tag="RP11-327P2.1-002" FT /product="ATPase, Cu++ transporting, beta polypeptide" FT /note="match: cDNAs: Em:L25591 Em:U03464 Em:U11700" FT /note="match: ESTs: Em:AI074620 Em:AL041073 Em:AW303610 FT Em:AW664651 Em:BE262569 Em:BF313366 Em:BF314537 Em:BF315943 FT Em:BG329406 Em:BG747093 Em:BI453738 Em:BM834965 Em:BM835109 FT Em:BM835274" FT CDS complement(join(AL162377.10:163792..164065, FT AL162377.10:164629..164731,AL162377.10:166312..166429, FT AL162377.10:166512..166715,AL162377.10:168087..168229, FT 52515217..52515360,52516522..52516690,52518245..52518427, FT 52520420..52520614,52523798..52523932,52524143..52524297, FT 52524408..52524535,52531652..52531743,52532447..52532680, FT 52534284..52534458,52535973..52536049,52539008..52539169, FT 52542580..52542743,52544628..52544885,52548071..52549304, FT AL139082.18:29750..29800)) FT /gene="ATP7B" FT /locus_tag="RP11-327P2.1-002" FT /standard_name="OTTHUMP00000018794" FT /product="ATPase, Cu++ transporting, beta polypeptide" FT /note="match: proteins: Sw:P35670 Sw:Q64446 Sw:Q64535 FT Sw:Q9XT50 Tr:Q9QUG4 Tr:Q9R0T2" FT /protein_id="CAI13743.1" FT /translation="MPEQERQITAREGASRKILSKLSLPTRAWEPAMKKSFAFDNVGYE FT GGLDGLGPSSQVATSTVRILGMTCQSCVKSIEDRISNLKGIISMKVSLEQGSATVKYVP FT SVVCLQQVCHQIGDMGFEASIAEGKAASWPSRSLPAQEAVVKLRVEGMTCQSCVSSIEG FT KVRKLQGVVRVKVSLSNQEAVITYQPYLIQPEDLRDHVNDMGFEAAIKSKVAPLSLGPI FT DIERLQSTNPKRPLSSANQNFNNSETLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQ FT LLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRS FT SSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTA FT TVLYNPSVISPEELRAAIEDMGFEASVVSESCSTNPLGNHSAGNSMVQTTDGTPTSVQE FT VAPHTGRLPANHAPDILAKSPQSTRAVAPQKCFLQIKGMTCASCVSNIERNLQKEAGVL FT SVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNIELTITGMTCA FT SCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLAQRN FT PNAHHLDHKMEIKQWKKSFLCSLVFGIPVMALMIYMLIPSNEPHQSMVLDHNIIPGLSI FT LNLIFFILCTFVQLLGGWYFYVQAYKSLRHRSANMDVLIVLATSIAYVYSLVILVVAVA FT EKAERSPVTFFDTPPMLFVFIALGRWLEHLAKSKTSEALAKLMSLQATEATVVTLGEDN FT LIIREEQVPMELVQRGDIVKVVPGGKFPVDGKVLEGNTMADESLITGEAMPVTKKPGST FT VIAGSINAHGSVLIKATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIII FT MSTLTLVVWIVIGFIDFGVVQRYFPNPNKHISQTEVIIRFAFQTSITVLCIACPCSLGL FT ATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITHGVPRVMRVLLLGDV FT ATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTETLGYCTDFQAVPGCGIGCKVS FT NVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVS FT DAMTDHEMKGQTAILVAIDGVLCGMIAIADAVKQEAALAVHTLQSMGVDVVLITGDNRK FT TARAIATQVGINKVFAEVLPSHKVAKVQELQNKGKKVAMVGDGVNDSPALAQADMGVAI FT GTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLVLALIYNLVGIPIAAGVF FT MPIGIVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDLERYEAQAHGHMKPLTASQVSV FT HIGMDDRWRDSPRATPWDQVSYVSQVSLSSLTSDKPSRHSAAADDDGDKWSLLLNGRDE FT EQYI" FT mRNA complement(join(52515207..52515360,52516522..52516690, FT 52518245..52518427,52520420..52520614,52524143..52524297, FT 52524408..52524535,52531652..52531743,52539008..52539169, FT 52542580..52542743,52544628..52544885,52548071..52548911)) FT /gene="ATP7B" FT /locus_tag="RP11-327P2.1-003" FT /product="ATPase, Cu++ transporting, beta polypeptide" FT /note="match: cDNAs: Em:L25591.1" FT mRNA complement(join(52538910..52539169,52542580..52542743, FT 52544628..52544885,52548071..52548111)) FT /gene="ATP7B" FT /locus_tag="RP11-327P2.1-004" FT /product="ATPase, Cu++ transporting, beta polypeptide" FT /note="match: ESTs: Em:AI074620.1" FT misc_feature 52555574 FT /note="Clone_left_end: RP11-248G5" FT misc_feature 52555774..52743364 FT /note="annotated region of clone" FT misc_feature 52576640 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 170bp by restriction digest data" FT mRNA complement(join(52741844..52743364,AL158066.12:101..175, FT AL158066.12:858..970,AL158066.12:2029..2119, FT AL158066.12:6510..6647,AL158066.12:11453..11525, FT AL158066.12:14847..14985,AL158066.12:17554..17694, FT AL158066.12:20510..21098,AL158066.12:24723..25336)) FT /locus_tag="RP11-64P12.8-003" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK027536.1" FT mRNA complement(join(AL162377.10:161709..164065, FT AL162377.10:164629..164731,AL162377.10:166312..166429, FT AL162377.10:166512..166715,AL162377.10:168087..168229, FT AL138821.12:1113..1256,AL138821.12:2418..2586, FT AL138821.12:4141..4323,AL138821.12:6316..6510, FT AL138821.12:9694..9828,AL138821.12:10039..10193, FT AL138821.12:10304..10431,AL138821.12:17548..17639, FT AL138821.12:18343..18576,AL138821.12:20180..20354, FT AL138821.12:21869..21945,AL138821.12:24904..25065, FT AL138821.12:28476..28639,AL138821.12:30524..30781, FT AL138821.12:33967..35200,52585423..52585630)) FT /gene="ATP7B" FT /locus_tag="RP11-327P2.1-002" FT /product="ATPase, Cu++ transporting, beta polypeptide" FT /note="match: ESTs: Em:AI074620 Em:AL041073 Em:AW303610 FT Em:AW664651 Em:BE262569 Em:BF313366 Em:BF314537 Em:BF315943 FT Em:BG329406 Em:BG747093 Em:BI453738 Em:BM834965 Em:BM835109 FT Em:BM835274" FT /note="match: cDNAs: Em:L25591 Em:U03464 Em:U11700" FT CDS complement(join(AL162377.10:163792..164065, FT AL162377.10:164629..164731,AL162377.10:166312..166429, FT AL162377.10:166512..166715,AL162377.10:168087..168229, FT AL138821.12:1113..1256,AL138821.12:2418..2586, FT AL138821.12:4141..4323,AL138821.12:6316..6510, FT AL138821.12:9694..9828,AL138821.12:10039..10193, FT AL138821.12:10304..10431,AL138821.12:17548..17639, FT AL138821.12:18343..18576,AL138821.12:20180..20354, FT AL138821.12:21869..21945,AL138821.12:24904..25065, FT AL138821.12:28476..28639,AL138821.12:30524..30781, FT AL138821.12:33967..35200,52585423..52585473)) FT /gene="ATP7B" FT /locus_tag="RP11-327P2.1-002" FT /standard_name="OTTHUMP00000018794" FT /product="ATPase, Cu++ transporting, beta polypeptide" FT /note="match: proteins: Sw:P35670 Sw:Q64446 Sw:Q64535 FT Sw:Q9XT50 Tr:Q9QUG4 Tr:Q9R0T2" FT /protein_id="CAI12888.1" FT /translation="MPEQERQITAREGASRKILSKLSLPTRAWEPAMKKSFAFDNVGYE FT GGLDGLGPSSQVATSTVRILGMTCQSCVKSIEDRISNLKGIISMKVSLEQGSATVKYVP FT SVVCLQQVCHQIGDMGFEASIAEGKAASWPSRSLPAQEAVVKLRVEGMTCQSCVSSIEG FT KVRKLQGVVRVKVSLSNQEAVITYQPYLIQPEDLRDHVNDMGFEAAIKSKVAPLSLGPI FT DIERLQSTNPKRPLSSANQNFNNSETLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQ FT LLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRS FT SSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTA FT TVLYNPSVISPEELRAAIEDMGFEASVVSESCSTNPLGNHSAGNSMVQTTDGTPTSVQE FT VAPHTGRLPANHAPDILAKSPQSTRAVAPQKCFLQIKGMTCASCVSNIERNLQKEAGVL FT SVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNIELTITGMTCA FT SCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLAQRN FT PNAHHLDHKMEIKQWKKSFLCSLVFGIPVMALMIYMLIPSNEPHQSMVLDHNIIPGLSI FT LNLIFFILCTFVQLLGGWYFYVQAYKSLRHRSANMDVLIVLATSIAYVYSLVILVVAVA FT EKAERSPVTFFDTPPMLFVFIALGRWLEHLAKSKTSEALAKLMSLQATEATVVTLGEDN FT LIIREEQVPMELVQRGDIVKVVPGGKFPVDGKVLEGNTMADESLITGEAMPVTKKPGST FT VIAGSINAHGSVLIKATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIII FT MSTLTLVVWIVIGFIDFGVVQRYFPNPNKHISQTEVIIRFAFQTSITVLCIACPCSLGL FT ATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITHGVPRVMRVLLLGDV FT ATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTETLGYCTDFQAVPGCGIGCKVS FT NVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVS FT DAMTDHEMKGQTAILVAIDGVLCGMIAIADAVKQEAALAVHTLQSMGVDVVLITGDNRK FT TARAIATQVGINKVFAEVLPSHKVAKVQELQNKGKKVAMVGDGVNDSPALAQADMGVAI FT GTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLVLALIYNLVGIPIAAGVF FT MPIGIVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDLERYEAQAHGHMKPLTASQVSV FT HIGMDDRWRDSPRATPWDQVSYVSQVSLSSLTSDKPSRHSAAADDDGDKWSLLLNGRDE FT EQYI" FT mRNA join(52586534..52586598,52602455..52602916) FT /gene="UTP14C" FT /locus_tag="RP11-248G5.6-003" FT /product="UTP14, U3 small nucleolar ribonucleoprotein, FT homolog C (yeast)" FT /note="match: ESTs: Em:AL598207" FT mRNA join(52586550..52586598,52593049..52593279, FT 52598142..52599073,52602455..52603800) FT /gene="UTP14C" FT /locus_tag="RP11-248G5.6-002" FT /product="UTP14, U3 small nucleolar ribonucleoprotein, FT homolog C (yeast)" FT /note="match: ESTs: Em:AL546916 Em:AL603539 Em:AL603540 FT Em:AL698540 Em:AL699435 Em:AU132282 Em:AW063638 Em:BI544858 FT Em:BM479135" FT /note="match: cDNAs: Em:AK025456 Em:BC010857" FT CDS join(52586555..52586598,52602455..52602521) FT /gene="UTP14C" FT /locus_tag="RP11-248G5.6-003" FT /standard_name="OTTHUMP00000018447" FT /product="UTP14, U3 small nucleolar ribonucleoprotein, FT homolog C (yeast)" FT /protein_id="CAI12889.1" FT /translation="MAAGERSWCLCKLLRSCGVYGSWHNYPCTQFGGPKA" FT CDS join(52586555..52586598,52593049..52593279, FT 52598142..52599073,52602455..52602726) FT /gene="UTP14C" FT /locus_tag="RP11-248G5.6-002" FT /standard_name="OTTHUMP00000018446" FT /product="UTP14, U3 small nucleolar ribonucleoprotein, FT homolog C (yeast)" FT /note="match: proteins: Tr:Q96FI7" FT /protein_id="CAI12890.1" FT /translation="MAAGERSWCLCKLLRFFYSLFFPGLIVCGTLCVCLVIVLWGIRLL FT LQRKKKLVSTSKNGKNQMVIAFFHPYCNAGGGGERVLWCALRALQKKYPEAVYVVYTGD FT VNVNGQQILEGAFRRFNIRLIHPVQFVFLRKRYLVEDSLYPHFTLLGQSLGSIFLGWEA FT LMQCVPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTISTDMLSVVKNQNIGFNNAAF FT ITRNPFLSKVKLIYYYLFAFIYGLVGSCSDVVMVNSSWTLNHILSLWKVGNCTNIVYPP FT CDVQTFLDIPLHEKKMTPGHLLVSVGQFRPEKNHPLQIRAFAKLLNKKMVESPPSLKLV FT LIGGCRNKDDELRVNQLRRLSEDLGVQEYVEFKINIPFDELKNYLSEATIGLHTMWNEH FT FGIGVVECMAAGTIILAHNSGGPKLDIVVPHEGDITGFLAESEEDYAETIAHILSMSAE FT KRLQIRKSARASVSRFSDQEFEVTFLSSVEKLFK" FT misc_feature 52587754 FT /note="Clone_right_end: RP11-381L18" FT mRNA join(52598827..52599073,52602455..52607701) FT /gene="UTP14C" FT /locus_tag="RP11-248G5.6-001" FT /product="UTP14, U3 small nucleolar ribonucleoprotein, FT homolog C (yeast)" FT /note="match: ESTs: Em:AA808024 Em:AA947799 Em:AI076921 FT Em:AL708143 Em:AU136336 Em:AV717206 Em:AW271597 Em:AW958136 FT Em:AW965038 Em:BE795700 Em:BF382632 Em:BG024801 Em:BG169474 FT Em:BG533242 Em:BG576819 Em:BG685545 Em:BI258279 Em:BI855782 FT Em:BI860757 Em:BM023189 Em:BM555489 Em:BM663350 Em:BM683967 FT Em:BM690670 Em:BM763201 Em:BM906895" FT /note="match: cDNAs: Em:D87455" FT CDS 52602941..52605241 FT /gene="UTP14C" FT /locus_tag="RP11-248G5.6-001" FT /standard_name="OTTHUMP00000018445" FT /product="UTP14, U3 small nucleolar ribonucleoprotein, FT homolog C (yeast)" FT /note="match: proteins: Sw:Q5TAP6" FT /protein_id="CAI12891.1" FT /translation="MNVNQVAENLALSHQEELVDLPKNYPLSENEDEGDSDGERKHQKL FT LEAIISLDGKNRRKLAERSEASLKVSEFSVSSEGSGEKLGLADLLEPVKTSSSLATVKK FT QLNRVKSKKVVELPLNKEKIEQIHREVAFSKTSQVLSKWDPIILKNQQAEQLVFPLGKE FT QPAIAPIEHALSGWKARTPLEQEIFNLLHKNKQPVTDPLLTPMEKASLQAMSLEEAKMH FT RAELQRARALQSYYEAKARKEKKIKSKKYHKVVKKGKAKKALKEFEQLQKVNPTVALEE FT MEKIENARMMERMSLKHQNSGKWAKSKAIMAKYDLEARQAMQEQLAKNKELTQKLQVAS FT ESEEEEGGTEVEELLVPHVANEVQMNVDGPNPWMFRSCTSDTKEAATQEDPEQVPELAA FT HEVSASEAEERPVAEEEILLREFEERQSLRKRSELNQDAEPASSQETKDSSSQEVLSEL FT RALSQKLKEKHQSRKQKASSEGTVPQVQREEPAPEEAEPLLLQRSERVQTLEELEELGK FT EDCFQNKELPRPVLEGQQSERTPNNRPDAPKEKKEKEQLINLQNFLTTQSPSVRSLAVP FT TIIEELEDEEERDQRQMIKEAFAGDDVIRDFLKEKREAVEASKPKDVDLTLPGWGEWGG FT VGLKPSAKKRRQFLIKAPEGPPRKDKNLPNVIISEKRNIHAAAHQVQVLPYPFTHHRQF FT ERTIQTPIGSTWNTQRAFQKLTTPKVVTKPGHIIKPIKAEDVGYQSSSRSDLPVIQRNP FT KRITTRHNKEEKL" FT polyA_signal 52607755..52607760 FT polyA_site 52607784 FT misc_feature 52619506..52619541 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 52637991..52638122 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(52660420..52660499,52661474..52661590, FT 52663383..52663455)) FT /locus_tag="RP11-248G5.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AW988570" FT mRNA complement(join(52741844..52743364,AL158066.12:101..175, FT AL158066.12:858..970,AL158066.12:2029..2119, FT AL158066.12:6510..6647,AL158066.12:11453..11525, FT AL158066.12:14847..14985,AL158066.12:17554..17694, FT AL158066.12:20510..20785,AL158066.12:54110..54202, FT AL158066.12:57876..57967,AL158066.12:60197..60302, FT AL158066.12:63935..64015,AL158066.12:66091..66152, FT AL158066.12:84616..84704,AL158066.12:84808..84889, FT AL158066.12:89400..89461,AL158066.12:110712..110776, FT AL158066.12:111523..111586,AL158066.12:111733..111832, FT AL158066.12:114109..114228,AL158066.12:120693..120854, FT AL158066.12:122378..122428)) FT /locus_tag="RP11-64P12.8-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AL137707.1" FT CDS complement(join(52639543..52639745,52646080..52646206, FT 52649894..52649962,52650199..52650279,52656374..52656448, FT 52657396..52657488,52660413..52660499,52661474..52661590, FT 52663383..52663449,52667190..52667371,52673879..52674012, FT 52676069..52676150,52676228..52676428,52678634..52678688, FT 52682454..52682540,52684476..52684546,52684630..52684713, FT 52686404..52686501,52693455..52693551,52701502..52701618)) FT /gene="NEK5" FT /locus_tag="RP11-248G5.4-001" FT /standard_name="OTTHUMP00000018442" FT /product="NIMA (never in mitosis gene a)-related kinase 5" FT /note="match: proteins: Sw:Q6P3R8.1" FT /protein_id="CAI12892.2" FT /translation="MDKYDVIKAIGQGAFGKAYLAKGKSDSKHCVIKEINFEKMPIQEK FT EASKKEVILLEKMKHPNIVAFFNSFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQ FT ILGWFVQISLGLKHIHDRKILHRDIKAQNIFLSKNGMVAKLGDFGIARVLNNSMELART FT CIGTPYYLSPEICQNKPYNNKTDIWSLGCVLYELCTLKHPFEGNNLQQLVLKICQAHFA FT PISPGFSRELHSLISQLFQVSPRDRPSINSILKRPFLENLIPKYLTPEVIQEEFSHMLI FT CRAGAPASRHAGKVVQKCKIQKVRFQGKCPPRSRISVPIKRNAILHRNEWRPPAGAQKA FT RSIKMIERPKIAAVCGHYDYYYAQLDMLRRRAHKPSYHPIPQENTGVEDYGQETRHGPS FT PSQWPAEYLQRKFEAQQYKLKVEKQLGLRPSSAEPNYNQRQELRSNGEEPRFQELPFRK FT NEMKEQEYWKQLEEIRQQYHNDMKEIRKKMGREPEENSKISHKTYLVKKSNLPVHQDAS FT EGEAPVQMEFRSCCPGWSAMARSWLTATSASQDIEKDLKQMRLQNTKESKNPEQKYKAK FT KGVKFEINLDKCISDENILQEEEAMDIPNETLTFEDGMKFKEYECVKEHGDYTDKAFEK FT LHCPEAGFSTQTVAAVGNRRQWDGGAPQTLLQMMAVADITSTCPTGPDSESVLSVSRQE FT GKTKDPYSPVLILM" FT mRNA complement(join(52610605..52611354,52624240..52624357, FT 52635955..52636089,52639620..52639745,52646080..52646206, FT 52649894..52649962,52650199..52650279,52660413..52660499, FT 52661474..52661590,52663383..52663449,52665673..52665785, FT 52667190..52667371,52676069..52676150,52676228..52676428, FT 52678634..52678688,52682454..52682540,52684476..52684546, FT 52684630..52684713,52686404..52686501,52701502..52701640, FT 52701731..52701798,52703158..52703238)) FT /gene="NEK5" FT /locus_tag="RP11-248G5.4-002" FT /product="NIMA (never in mitosis gene a)-related kinase 5" FT /note="match: cDNAs: Em:CR857862.1" FT mRNA complement(join(52638892..52639745,52646080..52646206, FT 52649894..52649962,52650199..52650279,52656374..52656448, FT 52657396..52657488,52660413..52660499,52661474..52661590, FT 52663383..52663449,52667190..52667371,52673879..52674012, FT 52676069..52676150,52676228..52676428,52678634..52678688, FT 52682454..52682540,52684476..52684546,52684630..52684713, FT 52686404..52686501,52693455..52693551,52701502..52701640, FT 52701731..52701798,52703165..52703214)) FT /gene="NEK5" FT /locus_tag="RP11-248G5.4-001" FT /product="NIMA (never in mitosis gene a)-related kinase 5" FT /note="match: ESTs: Em:BB666328" FT /note="match: cDNAs: Em:BC063885.1" FT polyA_site complement(52706783) FT polyA_signal complement(52706798..52706803) FT mRNA complement(join(<52707852..52707951,52709865..52709999, FT 52710252..52710395,52710936..52711038,52718051..52718122, FT 52718826..52719026,52722550..>52722589)) FT /gene="NEK3" FT /locus_tag="RP11-248G5.5-002" FT /product="NIMA (never in mitosis gene a)-related kinase 3" FT /note="match: ESTs: Em:BG742677 Em:BM696814" FT CDS complement(join(<52707852..52707951,52709865..52709999, FT 52710252..52710395,52710936..52711038,52718051..52718122, FT 52718826..52719026,52722550..>52722589)) FT /codon_start=2 FT /gene="NEK3" FT /locus_tag="RP11-248G5.5-002" FT /standard_name="OTTHUMP00000018444" FT /product="NIMA (never in mitosis gene a)-related kinase 3" FT /protein_id="CAI12894.1" FT /translation="GCILYELCTLKHPFQANSWKNLILKVCQGCISPLPSHYSYELQFL FT VKQMFKRNPSHRPSATTLLSRGIVARLVQKCLPPEIIMEYGEEVLEEIKNSKHNTPRKK FT QEEEQDRKGSHTDLESINENLVESALRRVNREEKGNKSVHLRKASSPNLHRRQWEKNVP FT NTALTALENASILTSSLTAEDDRGGSVIKYSKNTTRKQWLKETPDTLLNILKNADLSLA FT FQTYTIYRPGSEGFLKGPLSEETEASDSVDGGHDSVILDPERL" FT misc_feature 52729324 FT /note="Clone_left_end: RP11-64P12" FT CDS complement(join(52707278..52707362,52707825..52707951, FT 52709865..52709999,52710252..52710395,52710936..52711038, FT 52715156..52715192,52718034..52718122,52718826..52719026, FT 52722550..52722604,52725281..52725367,52725460..52725527, FT 52726744..52726827,52728030..52728127,52728215..52728308, FT 52730210..52730326)) FT /gene="NEK3" FT /locus_tag="RP11-248G5.5-001" FT /standard_name="OTTHUMP00000018443" FT /product="NIMA (never in mitosis gene a)-related kinase 3" FT /note="match: proteins: Sw:P51956 Sw:Q9R0A5 Tr:Q99K72" FT /protein_id="CAI12895.1" FT /translation="MDDYMVLRMIGEGSFGRALLVQHESSNQMFAMKEIRLPKSFSNTQ FT NSRKEAVLLAKMKHPNIVAFKESFEAEGHLYIVMEYCDGGDLMQKIKQQKGKLFPEDMI FT LNWFTQMCLGVNHIHKKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLSNPMAFACTYV FT GTPYYVPPEIWENLPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGCISPL FT PSHYSYELQFLVKQMFKRNPSHRPSATTLLSRGIVARLVQKCLPPEIIMEYGEEVLEEI FT KNSKHNTPRKKVRILTEIRIALGNEASTVQEEEQDRKGSHTDLESINENLVESALRRVN FT REEKGNKSVHLRKASSPNLHRRQWEKNVPNTALTALENASILTSSLTAEDDRGGSVIKY FT SKNTTRKQWLKETPDTLLNILKNADLSLAFQTYTIYRPGSEGFLKGPLSEETEASDSVD FT GGHDSVILDPERLEPGLDEEDTDFEEEDDNPDWVSELKKRAGWQGLCDR" FT mRNA complement(join(<52730210..52730383,52733333..52733513)) FT /gene="NEK3" FT /locus_tag="RP11-248G5.5-003" FT /product="NIMA (never in mitosis gene a)-related kinase 3" FT /note="match: ESTs: Em:AI209040.1 Em:BE860266.1 FT Em:H86053.1" FT mRNA complement(join(52706783..52707362,52707825..52707951, FT 52709865..52709999,52710252..52710395,52710936..52711038, FT 52715156..52715192,52718034..52718122,52718826..52719026, FT 52722550..52722604,52725281..52725367,52725460..52725527, FT 52726744..52726827,52728030..52728127,52728215..52728308, FT 52730210..52730383,52733678..52733724)) FT /gene="NEK3" FT /locus_tag="RP11-248G5.5-001" FT /product="NIMA (never in mitosis gene a)-related kinase 3" FT /note="match: ESTs: Em:AA129853 Em:AI026881 Em:AI203671 FT Em:AI360208 Em:AI659549 Em:AI885400 Em:AI971454 Em:AV666755 FT Em:AW134598 Em:AW362976 Em:AW364789 Em:AW364793 Em:AW885868 FT Em:AW960403 Em:BF762035 Em:BF888116 Em:BI093553 Em:BI680950 FT Em:BI754945 Em:BM984985 Em:BQ432111 Em:H15206" FT /note="match: cDNAs: Em:AF093416 Em:AF099066 Em:BC005411 FT Em:BC019916 Em:Z29067" FT polyA_site complement(52741844) FT polyA_signal complement(52741861..52741866) FT misc_feature 52743264 FT /note="Clone_right_end: RP11-248G5" FT misc_feature 52743365..52881465 FT /note="annotated region of clone" FT mRNA complement(join(52793479..52793765,52795871..52795941, FT 52797374..52797466,52801140..52801231,52803461..52803566, FT 52807199..52807279,52809355..52809416,52827880..52827968, FT 52828072..52828153,52832664..52832725,52853976..52854040, FT 52854787..52854850,52854997..52855096,52857373..52857492, FT 52863957..52864118,52865642..52865692,52871901..52871963, FT AL683825.2:2915..2968,AL683825.2:3865..3918, FT BX088550.5:3007..3115,BX088550.5:3557..3696, FT BX088550.5:3793..3894,BX088550.5:5267..5333, FT BX088550.5:5367..5412,BX088550.5:12782..12888, FT BX088550.5:13654..14004)) FT /locus_tag="RP11-64P12.8-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC041889.1" FT /note="match: ESTs: Em:AI004874.1 Em:AL043530.1 FT Em:BF980244.1 Em:BI561603.1" FT mRNA complement(join(AL139082.18:186171..187691, FT 52743365..52743439,52744122..52744234,52745293..52745383, FT 52749774..52749911,52754717..52754789,52758111..52758249, FT 52760818..52760958,52763774..52764362,52767987..52768600)) FT /locus_tag="RP11-64P12.8-003" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK027536.1" FT CDS complement(join(52749774..52749911,52754717..52754789, FT 52758408..52758543,52760818..52760958,52763774..52764049, FT 52768358..52768513)) FT /pseudo FT /locus_tag="RP11-64P12.2-001" FT /product="mitochondrial ribosomal protein S31 (MRPS31) FT pseudogene" FT /note="match: proteins: Sw:Q61733 Sw:Q92665" FT polyA_site complement(52793479) FT polyA_signal complement(52793494..52793499) FT mRNA complement(join(AL139082.18:186171..187691, FT 52743365..52743439,52744122..52744234,52745293..52745383, FT 52749774..52749911,52754717..52754789,52758111..52758249, FT 52760818..52760958,52763774..52764049,52797374..52797466, FT 52801140..52801231,52803461..52803566,52807199..52807279, FT 52809355..52809416,52827880..52827968,52828072..52828153, FT 52832664..52832725,52853976..52854040,52854787..52854850, FT 52854997..52855096,52857373..52857492,52863957..52864118, FT 52865642..52865692)) FT /locus_tag="RP11-64P12.8-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AL137707.1" FT CDS complement(join(52793663..52793765,52795871..52795941, FT 52797374..52797466,52801140..52801231,52803461..52803566, FT 52807199..52807279,52809355..52809416,52827880..52827968, FT 52828072..52828153,52832664..52832725,52853976..52854040, FT 52854787..52854850,52854997..52855096,52857373..52857492, FT 52863957..52864118,52865642..52865692,52871901..52871963)) FT /pseudo FT /locus_tag="RP11-64P12.3-001" FT /product="TPIP (TPTE and PTEN homologous inositol lipid FT phosphatase) pseudogene" FT /note="match: proteins: Sw:P56180 Sw:Q6XPS3 Tr:Q91X01 FT Tr:Q91X02 Tr:Q91X03" FT misc_feature 52881365 FT /note="Clone_right_end: RP11-64P12" FT misc_feature 52881466..52896408 FT /note="annotated region of clone" FT mRNA complement(join(AL158066.12:50215..50501, FT AL158066.12:52607..52677,AL158066.12:54110..54202, FT AL158066.12:57876..57967,AL158066.12:60197..60302, FT AL158066.12:63935..64015,AL158066.12:66091..66152, FT AL158066.12:84616..84704,AL158066.12:84808..84889, FT AL158066.12:89400..89461,AL158066.12:110712..110776, FT AL158066.12:111523..111586,AL158066.12:111733..111832, FT AL158066.12:114109..114228,AL158066.12:120693..120854, FT AL158066.12:122378..122428,AL158066.12:128637..128699, FT 52882381..52882434,52883331..52883384, FT BX088550.5:3007..3115,BX088550.5:3557..3696, FT BX088550.5:3793..3894,BX088550.5:5267..5333, FT BX088550.5:5367..5412,BX088550.5:12782..12888, FT BX088550.5:13654..14004)) FT /locus_tag="RP11-64P12.8-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC041889.1" FT /note="match: ESTs: Em:AI004874.1 Em:AL043530.1 FT Em:BF980244.1 Em:BI561603.1" FT misc_feature 52894409 FT /note="Clone_right_end: RP11-466F15" FT misc_feature 52896409..52940919 FT /note="annotated region of clone" FT mRNA complement(join(52898036..52898302,52907190..52907296, FT 52908062..52908410)) FT /locus_tag="RP11-64P12.8-004" FT /product="novel transcript" FT /note="match: ESTs: Em:BG037125.1" FT mRNA complement(join(AL158066.12:50215..50501, FT AL158066.12:52607..52677,AL158066.12:54110..54202, FT AL158066.12:57876..57967,AL158066.12:60197..60302, FT AL158066.12:63935..64015,AL158066.12:66091..66152, FT AL158066.12:84616..84704,AL158066.12:84808..84889, FT AL158066.12:89400..89461,AL158066.12:110712..110776, FT AL158066.12:111523..111586,AL158066.12:111733..111832, FT AL158066.12:114109..114228,AL158066.12:120693..120854, FT AL158066.12:122378..122428,AL158066.12:128637..128699, FT AL683825.2:2915..2968,AL683825.2:3865..3918, FT 52897415..52897523,52897965..52898104,52898201..52898302, FT 52899675..52899741,52899775..52899820,52907190..52907296, FT 52908062..52908412)) FT /locus_tag="RP11-64P12.8-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC041889.1" FT /note="match: ESTs: Em:AI004874.1 Em:AL043530.1 FT Em:BF980244.1 Em:BI561603.1" FT misc_feature 52936920 FT /note="Clone_left_end: RP11-245D16" FT misc_feature 52940920..53055362 FT /note="annotated region of clone" FT polyA_site complement(52951302) FT polyA_signal complement(52951317..52951322) FT CDS complement(join(52951546..52952924,52960163..52960321, FT 52971367..52972329,52976678..52976735)) FT /gene="THSD1" FT /locus_tag="RP11-245D16.1-001" FT /standard_name="OTTHUMP00000018448" FT /product="thrombospondin, type I, domain containing 1" FT /note="match: proteins: Sw:Q9NS62.1" FT /protein_id="CAH71657.1" FT /translation="MKPMLKDFSNLLLVVLCDYVLGEAEYLLLREPGHVALSNDTVYVD FT FQYFDGANGTLRNVSVLLLEANTNQTVTTKYLLTNQSQGTLKFECFYFKEAGDYWFTMT FT PEATDNSTPFPWWEKSAFLKVEWPVFHVDLNRSAKAAEGTFQVGLFTSQPLCPFPVDKP FT NIVVDVIFTNSLPEARRNSRQPLEIRTSKRTELAQGQWVEFGCAPLGPEAYVTVVLKLL FT GRDSVITSTGPIDLAQKFGYKLVMVPELTCESGVEVTVLPPPCTFVQGVVTVFKEAPRY FT PGKRTIHLAENSLPLGERRTIFNCTLFDMGKNKYCFDFGISSRSHFSAKEECMLIQRNT FT ETWGLWQPWSQCSATCGDGVRERRRVCLTSFPSSPVCPGMSLEASLCSLEECAAFQPSS FT PSPLQPQGPVKSNNIVTVTGISLCLFIIIATVLITLWRRFGRPAKCSTPARHNSIHSPS FT FRKNSDEENICELSEQRGSFSDGGDGPTGSPGDTGIPLTYRRSGPVPPEDDASGSESFQ FT SNAQKIIPPLFSYRLAQQQLKEMKKKGLTETTKVYHVSQSPLTDTAIDAAPSAPLDLES FT PEEAAANKFRIKSPFPEQPAVSAGERPPSRLDLNVTQASCAISPSQTLIRKSQARHVGS FT RGGPSERSHARNAHFRRTASFHEARQARPFRERSMSTLTPRQAPAYSSRTRTCEQAEDR FT FRPQSRGAHLFPEKLEHFQEASGTRGPLNPLPKSYTLGQPLRKPDLGDHQAGLVAGIER FT TEPHRARRGPSPSHKSVSRKQSSPISPKDNYQRVSSLSPSQCRKDKCQSFPTHPEFAFY FT DNTSFGLTEAEQRMLDLPGYFGSNEEDETTSTLSVEKLVI" FT CDS complement(join(52951546..52952924,52971367..52972329, FT 52976678..52976735)) FT /gene="THSD1" FT /locus_tag="RP11-245D16.1-002" FT /standard_name="OTTHUMP00000178678" FT /product="thrombospondin, type I, domain containing 1" FT /note="match: proteins: Sw:Q9NS62-2.1 Sw:Q9NS62.1 FT Tr:Q6P3U1.1" FT /protein_id="CAM14602.1" FT /translation="MKPMLKDFSNLLLVVLCDYVLGEAEYLLLREPGHVALSNDTVYVD FT FQYFDGANGTLRNVSVLLLEANTNQTVTTKYLLTNQSQGTLKFECFYFKEAGDYWFTMT FT PEATDNSTPFPWWEKSAFLKVEWPVFHVDLNRSAKAAEGTFQVGLFTSQPLCPFPVDKP FT NIVVDVIFTNSLPEARRNSRQPLEIRTSKRTELAQGQWVEFGCAPLGPEAYVTVVLKLL FT GRDSVITSTGPIDLAQKFGYKLVMVPELTCESGVEVTVLPPPCTFVQGVVTVFKEAPRY FT PGKRTIHLAENSLPLGERRTIFNCTLFDMGKNKYCFDFGISSRSHFSAKEECMLIQRNT FT AFQPSSPSPLQPQGPVKSNNIVTVTGISLCLFIIIATVLITLWRRFGRPAKCSTPARHN FT SIHSPSFRKNSDEENICELSEQRGSFSDGGDGPTGSPGDTGIPLTYRRSGPVPPEDDAS FT GSESFQSNAQKIIPPLFSYRLAQQQLKEMKKKGLTETTKVYHVSQSPLTDTAIDAAPSA FT PLDLESPEEAAANKFRIKSPFPEQPAVSAGERPPSRLDLNVTQASCAISPSQTLIRKSQ FT ARHVGSRGGPSERSHARNAHFRRTASFHEARQARPFRERSMSTLTPRQAPAYSSRTRTC FT EQAEDRFRPQSRGAHLFPEKLEHFQEASGTRGPLNPLPKSYTLGQPLRKPDLGDHQAGL FT VAGIERTEPHRARRGPSPSHKSVSRKQSSPISPKDNYQRVSSLSPSQCRKDKCQSFPTH FT PEFAFYDNTSFGLTEAEQRMLDLPGYFGSNEEDETTSTLSVEKLVI" FT mRNA complement(join(52951322..52952924,52960163..52960321, FT 52971367..52972329,52976678..52976816,52980166..52980263)) FT /gene="THSD1" FT /locus_tag="RP11-245D16.1-001" FT /product="thrombospondin, type I, domain containing 1" FT /note="match: ESTs: Em:BM971893.1 Em:BM972213.1 FT Em:BM977930.1 Em:BU737349.1" FT /note="match: cDNAs: Em:AB044385.1 Em:CR616305.1 FT Em:CR860043.1" FT mRNA complement(join(52951305..52952924,52971367..52972329, FT 52976678..52976816,52980166..52980629)) FT /gene="THSD1" FT /locus_tag="RP11-245D16.1-002" FT /product="thrombospondin, type I, domain containing 1" FT /note="match: cDNAs: Em:AK096289.1 Em:BC063842.1" FT polyA_site complement(52986741) FT polyA_signal complement(52986764..52986769) FT mRNA complement(join(52987289..52987361,52990152..52990442)) FT /gene="VPS36" FT /locus_tag="RP11-245D16.3-005" FT /product="vacuolar protein sorting 36 (yeast)" FT /note="match: ESTs: Em:AW468106" FT mRNA complement(join(52989660..52990058,52990152..52990296)) FT /gene="VPS36" FT /locus_tag="RP11-245D16.3-006" FT /product="vacuolar protein sorting 36 (yeast)" FT /note="match: ESTs: Em:BF513601" FT mRNA complement(join(52999905..53000201,53001124..53001201, FT 53001322..53001354,53003371..53003502)) FT /gene="VPS36" FT /locus_tag="RP11-245D16.3-004" FT /product="vacuolar protein sorting 36 (yeast)" FT /note="match: ESTs: Em:AW418680" FT mRNA complement(join(53008973..53009017,53010425..53010539, FT 53013233..53013303,53016512..53016580,53024066..53024379)) FT /gene="VPS36" FT /locus_tag="RP11-245D16.3-002" FT /product="vacuolar protein sorting 36 (yeast)" FT /note="match: ESTs: Em:AI221133 Em:N91573" FT mRNA complement(join(52986839..52990058,52990152..52990228, FT 52991192..52991276,52992127..52992191,52997709..52997774, FT 53000067..53000201,53001124..53001201,53001322..53001354, FT 53007797..53007883,53008928..53009017,53010425..53010539, FT 53013233..53013303,53016512..53016580,53024634..53024757)) FT /gene="VPS36" FT /locus_tag="RP11-245D16.3-001" FT /product="vacuolar protein sorting 36 (yeast)" FT /note="match: ESTs: Em:BM674913.1 Em:BM978406.1 FT Em:BM993947.1" FT /note="match: cDNAs: Em:AK023182.1 Em:BC037279.1 FT Em:BX647847.1 Em:CR933653.1" FT CDS complement(join(52989965..52990058,52990152..52990228, FT 52991192..52991276,52992127..52992191,52997709..52997774, FT 53000067..53000201,53001124..53001201,53001322..53001354, FT 53007797..53007883,53008928..53009017,53010425..53010539, FT 53013233..53013303,53016512..53016580,53024634..53024729)) FT /gene="VPS36" FT /locus_tag="RP11-245D16.3-001" FT /standard_name="OTTHUMP00000018449" FT /product="vacuolar protein sorting 36 (yeast)" FT /note="match: proteins: Sw:P0C0A2.1 Sw:Q86VN1.1 Sw:Q91XD6.1 FT Tr:Q3TSR1.1" FT /protein_id="CAH71658.1" FT /translation="MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTH FT RLIWRDQKNHECCMAILLSQIVFIEEQAAGIGKSAKIVVHLHPAPPNKEPGPFQSSKNS FT YIKLSFKEHGQIEFYRRLSEEMTQRRWENMPVSQSLQTNRGPQPGRIRAVGIVGIERKL FT EEKRKETDKNISEAFEDLSKLMIKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLL FT SMGIANPVTRETYGSGTQYHMQLAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMEL FT LSPEDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSE FT EFAKLVGMSVLLAKERLLLAEKMGHLCRDDSVEGLRFYPNLFMTQS" FT mRNA complement(join(53010056..53010539,53013233..53013303, FT 53016512..53016580,53024634..53024763)) FT /gene="VPS36" FT /locus_tag="RP11-245D16.3-003" FT /product="vacuolar protein sorting 36 (yeast)" FT /note="match: ESTs: Em:BG400860" FT mRNA join(53029574..53029761,53030658..53030742, FT 53035034..53035109,53035193..53036061,53036498..53036702, FT 53039430..53039945) FT /gene="CKAP2" FT /locus_tag="RP11-245D16.2-002" FT /product="cytoskeleton associated protein 2" FT /note="match: ESTs: Em:AL529990.3" FT /note="match: cDNAs: Em:AY062262.1 Em:BC010901.1 FT Em:CR590367.1" FT mRNA join(53029574..53029761,53030658..53030742, FT 53035034..53035109,53035193..53036061,53036498..53036702, FT 53039430..53039600,53042413..53042482,53047964..53048219, FT 53049030..53050484) FT /gene="CKAP2" FT /locus_tag="RP11-245D16.2-001" FT /product="cytoskeleton associated protein 2" FT /note="match: ESTs: Em:AI080074.1 Em:BU631631.1 FT Em:BU680762.1 Em:CA416992.1 Em:CA430297.1" FT /note="match: cDNAs: Em:AK022982.1 Em:AY062261.1" FT CDS join(53029692..53029761,53030658..53030742, FT 53035034..53035109,53035193..53036061,53036498..53036702, FT 53039430..53039609) FT /gene="CKAP2" FT /locus_tag="RP11-245D16.2-002" FT /standard_name="OTTHUMP00000018457" FT /product="cytoskeleton associated protein 2" FT /protein_id="CAH71661.2" FT /translation="MSTPAVPQDLQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQ FT ENEMLSSRDQRVVTSEDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKP FT SNELTNSTVVIDTHKPKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQ FT KQDANMPKKPVLGSYRGQIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNT FT SSVTVKSNRSSNMTATTKFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIR FT KGPHEKELLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPV FT DQRRHTAGKAIVDSRSAQPKETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAGQNE FT KPVGSFWTTMAEEDEQRLFTEKVNNTFSECLNLINEGCPKEDILVTLNDLIKNIPDAKK FT LVKYWICLALIEPITSPIENIIAIYEKAILAGAQVR" FT CDS join(53029692..53029761,53030658..53030742, FT 53035034..53035109,53035193..53036061,53036498..53036702, FT 53039430..53039600,53042413..53042482,53047964..53048219, FT 53049030..53049276) FT /gene="CKAP2" FT /locus_tag="RP11-245D16.2-001" FT /standard_name="OTTHUMP00000018455" FT /product="cytoskeleton associated protein 2" FT /note="match: proteins: Tr:Q5R7F8.1" FT /protein_id="CAH71660.2" FT /translation="MSTPAVPQDLQLPPSQRAQSAFKEQRRQKLKEHLLRRKTLFAYKQ FT ENEMLSSRDQRVVTSEDQVQEGTKVLKLKTKMADKENMKRPAESKNNTVVGKHCIPLKP FT SNELTNSTVVIDTHKPKDSNQTPHLLLTEDDPQSQHMTLSQAFHLKNNSKKKQMTTEKQ FT KQDANMPKKPVLGSYRGQIVQSKINSFRKPLQVKDESSAATKKLSATIPKATKPQPVNT FT SSVTVKSNRSSNMTATTKFVSTTSQNTQLVRPPIRSHHSNTRDTVKQGISRTSANVTIR FT KGPHEKELLQSKTALSSVKTSSSQGIIRNKTLSRSIASEVIARPASLSNDKLMEKSEPV FT DQRRHTAGKAIVDSRSAQPKETSEERKARLSEWKAGKGRVLKRPPNSVVTQHEPAGQNE FT KPVGSFWTTMAEEDEQRLFTEKVNNTFSECLNLINEGCPKEDILVTLNDLIKNIPDAKK FT LVKYWICLALIEPITSPIENIIAIYEKAILAGAQPIEEMRHTIVDILTMKSQEKANLGE FT NMEKSCASKEEVKEVSIEDTGVDVDPEKLEMESKLHRNLLFQDCEKEQDNKTKDPTHDV FT KTPNTETRTSCLIKYNVSTTPYLQSVKKKVQFDGTNSAFKELKFLTPVRRSRRLQEKTS FT KLPDMLKDHYPCVSSLEQLTELGRETDAFVCRPNAALCRVYYEADTT" FT polyA_signal 53039940..53039945 FT polyA_site 53039978 FT polyA_signal 53049281..53049286 FT polyA_site 53049300 FT polyA_signal 53050465..53050470 FT polyA_site 53050485 FT polyA_signal 53050740..53050745 FT polyA_site 53050762 FT misc_feature 53053276 FT /note="Clone_left_end: RP11-78J21" FT misc_feature 53055363..53218652 FT /note="annotated region of clone" FT mRNA complement(join(53058296..53058419,53058655..53058815)) FT /locus_tag="RP11-78J21.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG195226" FT mRNA join(53063128..53063478,53064244..53064350, FT 53071697..53071809,53073178..53073279) FT /locus_tag="RP11-78J21.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI561603" FT mRNA join(53063128..53063478,53064244..53064350, FT 53073178..53073440) FT /locus_tag="RP11-78J21.4-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BG037125" FT misc_feature 53066908..53066974 FT /note="Sequence from overlapping clone FT RP11-245D16(AL359513).Assembly confirmed by restriction FT digest" FT CDS join(53096767..53096929,53105737..53105839, FT 53105986..53106040,53106790..53106853,53122018..53122078, FT 53126590..53126665,53126771..53126858,53145366..53145426, FT 53147502..53147580,53151207..53151308,53153490..53153568, FT 53157231..53157321,53158768..53158837,53160945..53161041) FT /pseudo FT /locus_tag="RP11-78J21.5-001" FT /product="transmembrane phosphatase with tensin homology FT (TPTE) pseudogene" FT /note="match: proteins: Sw:P56180 Sw:Q6XPS3.1 Tr:Q91X02 FT Tr:Q91X03" FT misc_feature 53105406 FT /note="Clone_right_end: RP11-245D16" FT CDS join(53191693..53191840,53196121..53196400, FT 53201575..53201710,53203352..53203490,53206555..53206624, FT 53211436..53211581) FT /pseudo FT /locus_tag="RP11-78J21.2-001" FT /product="mitochondrial ribosomal protein S31 (MRPS31) FT pseudogene" FT /note="match: proteins: Sw:Q61733 Sw:Q92665" FT misc_feature 53212374 FT /note="Clone_left_end: RP11-93H24" FT mRNA 53216568..53217915 FT /locus_tag="RP11-78J21.1-001" FT /product="novel protein similar to heterogeneous nuclear FT ribonucleoprotein A1 (HNRPA1)" FT /note="match: ESTs: Em:AI929386 Em:AL513628 Em:AL570559 FT Em:AU118055 Em:BE505095 Em:BE798198 Em:BG528046 Em:BG743252 FT Em:BM479823 Em:BM553186 Em:BM721161 Em:BM916330 FT Em:BM917233" FT /note="match: cDNAs: Em:BC009600 Em:M84334" FT CDS 53216628..53217590 FT /locus_tag="RP11-78J21.1-001" FT /standard_name="OTTHUMP00000018460" FT /product="novel protein similar to heterogeneous nuclear FT ribonucleoprotein A1 (HNRPA1)" FT /note="match: proteins: Sw:P04256 Sw:P09651 Sw:P09867 FT Sw:P49312 Tr:P09651" FT /protein_id="CAI16736.1" FT /translation="MSKSASPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVV FT MRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTV FT KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV FT IQKYHTVKGHNCEVRKALPKQEMASASSSQRGRRGSGNFGGGRGDGFGGNDNFGRGGNF FT SGRGGFGGSCGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNF FT GGRSSGPYGGGGQYFAKPQNQGGYGVSSSSSSYGSGRRF" FT misc_feature 53218552 FT /note="Clone_right_end: RP11-78J21" FT misc_feature 53218653..53285717 FT /note="annotated region of clone" FT mRNA join(53226844..53227093,53227181..53227238, FT 53231667..53231757,53232234..53232361,53232534..53232603, FT 53233314..53233384,53236784..53236837,53237231..53237247, FT 53238170..53238192,53239772..53239784) FT /gene="SUGT1" FT /locus_tag="RP11-93H24.2-001" FT /product="SGT1, suppressor of G2 allele of SKP1 (S. FT cerevisiae)" FT /note="match: ESTs: Em:AL521968 Em:BG492429" FT mRNA join(53226974..53227093,53227181..53227238, FT 53231667..53231757,53232534..53232603,53233314..53233384, FT 53235610..53235705,53236784..53236837,53237231..53237247, FT 53238170..53238192,53239772..53239868,53240947..53241054, FT 53250365..53250455,53254109..53254290,53261869..53262007) FT /gene="SUGT1" FT /locus_tag="RP11-93H24.2-002" FT /product="SGT1, suppressor of G2 allele of SKP1 (S. FT cerevisiae)" FT /note="match: ESTs: Em:AA714758.1 Em:BM979808.1 FT Em:BM981979.1 Em:BQ010259.1 Em:BQ014480.1 Em:BU741531.1 FT Em:CA748527.1 Em:CA748563.1" FT /note="match: cDNAs: Em:AY321358.1" FT mRNA join(53227001..53227093,53227181..53227238, FT 53231667..53231757,53232534..53232603,53233314..53233384, FT 53236784..53236837,53237231..53237247,53238170..53238192, FT 53239772..53239868,53240947..53241054,53250365..53250455, FT 53254109..53254290,53261869..53262433) FT /gene="SUGT1" FT /locus_tag="RP11-93H24.2-003" FT /product="SGT1, suppressor of G2 allele of SKP1 (S. FT cerevisiae)" FT /note="match: cDNAs: Em:BC000911.1" FT CDS join(53227056..53227093,53227181..53227238, FT 53231667..53231757,53232534..53232603,53233314..53233384, FT 53235610..53235705,53236784..53236837,53237231..53237247, FT 53238170..53238192,53239772..53239868,53240947..53241054, FT 53250365..53250455,53254109..53254290,53261869..53261970) FT /gene="SUGT1" FT /locus_tag="RP11-93H24.2-002" FT /standard_name="OTTHUMP00000018461" FT /product="SGT1, suppressor of G2 allele of SKP1 (S. FT cerevisiae)" FT /note="match: proteins: Sw:Q9Y2Z0.2" FT /protein_id="CAM23909.1" FT /translation="MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDDA FT QYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTE FT GQKLDIETGFHRVGQAGLQLLTSSDPPALDSQSAGITGADANFSVWIKRCQEAQNGSES FT EVWTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKL FT ELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSS FT PYTRNWDKLVGEIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFMESGGTVL FT STNWSDVGKRKVEINPPDDMEWKKY" FT CDS join(53227056..53227093,53227181..53227238, FT 53231667..53231757,53232534..53232603,53233314..53233384, FT 53236784..53236837,53237231..53237247,53238170..53238192, FT 53239772..53239868,53240947..53241054,53250365..53250455, FT 53254109..53254290,53261869..53261970) FT /gene="SUGT1" FT /locus_tag="RP11-93H24.2-003" FT /standard_name="OTTHUMP00000178675" FT /product="SGT1, suppressor of G2 allele of SKP1 (S. FT cerevisiae)" FT /note="match: proteins: Tr:Q5TAM6.1" FT /protein_id="CAI17072.1" FT /translation="MAAAAAGTATSQRFFQSFSDALIDEDPQAALEELTKALEQKPDDA FT QYYCQRAYCHILLGNYCVAVADAKKSLELNPNNSTAMLRKGICEYHEKNYAAALETFTE FT GQKLDSADANFSVWIKRCQEAQNGSESEVWTHQSKIKYDWYQTESQVVITLMIKNVQKN FT DVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKPEAVRW FT EKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDKLVGEIKEEEKNEKLEGDAALNRLF FT QQIYSDGSDEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY" FT mRNA complement(join(53277404..53277945,53282671..53282837, FT AL139085.13:1234..1387,AL139085.13:12515..12628, FT AL139085.13:21737..21877,AL139085.13:27549..27689, FT AL139085.13:28148..28298)) FT /gene="LECT1" FT /locus_tag="RP11-93H24.1-001" FT /product="leukocyte cell derived chemotaxin 1" FT /note="match: ESTs: Em:BG900633.1 Em:BQ002945.1 FT Em:CA448941.1 Em:CX757187.1" FT /note="match: cDNAs: Em:AB006000.1 Em:CR541910.1" FT CDS complement(join(53277730..53277945,53282671..53282837, FT AL139085.13:1234..1387,AL139085.13:12515..12628, FT AL139085.13:21737..21877,AL139085.13:27549..27689, FT AL139085.13:28148..28219)) FT /gene="LECT1" FT /locus_tag="RP11-93H24.1-001" FT /standard_name="OTTHUMP00000018466" FT /product="leukocyte cell derived chemotaxin 1" FT /note="match: proteins: Sw:O70367.1 Sw:O75829.1 Sw:Q9Z1F6.1 FT Tr:Q5TAM4.1" FT /protein_id="CAI17074.1" FT /translation="MTENSDKVPIALVGPDDVEFCSPPAYATLTVKPSSPARLLKVGAV FT VLISGAVLLLFGAIGAFYFWKGSDSHIYNVHYTMSINGKLQDGSMEIDAGNNLETFKMG FT SGAEEAIAVNDFQNGITGIRFAGGEKCYIKAQVKARIPEVGAVTKQSISSKLEGKIMPV FT KYEENSLIWVAVDQPVKDNSFLSSKVLELCGDLPIFWLKPTYPKEIQRERREVVRKIVP FT TTTKRPHSGPRSNPGAGRLNNETRPSVQEDSQAFNPDNPYHQQEGESMTFDPRLDHEGI FT CCIECRRSYTHCQKICEPLGGYYPWPYNYQGCRSACRVIMPCSWWVARILGMV" FT polyA_signal 53261970..53261975 FT polyA_site 53261989 FT polyA_signal 53262196..53262201 FT polyA_site 53262219 FT polyA_site 53262234 FT polyA_site complement(53277399) FT polyA_signal complement(53277425..53277430) FT misc_feature 53285518 FT /note="Clone_left_end: RP11-431O22" FT misc_feature 53285718..53458909 FT /note="annotated region of clone" FT mRNA complement(join(<53286851..53287004,53298132..53298245, FT 53307354..53307494,53313166..>53313487)) FT /gene="LECT1" FT /locus_tag="RP11-93H24.1-002" FT /product="leukocyte cell derived chemotaxin 1" FT /note="match: ESTs: Em:BI917056" FT CDS complement(join(<53286851..53287004,53298132..53298245, FT 53307354..53307494,53313166..>53313487)) FT /codon_start=2 FT /gene="LECT1" FT /locus_tag="RP11-93H24.1-002" FT /standard_name="OTTHUMP00000018467" FT /product="leukocyte cell derived chemotaxin 1" FT /protein_id="CAI14107.1" FT /translation="RLQRTLGRERGERGTRRSPGELFPARLPTPWGLPRGARVRWGPQV FT LAAQTRRSLSRPGPQAYATLTVKPSSPARLLKVGAVVLISGAVLLLFGAIGAFYFWKGS FT DSHIYNVHYTMSINGKLQDGSMEIDAGNNLETFKMGSGAEEAIAVNDFQNGITGIRFAG FT GEKCYIKAQVKARIPEVGAVTKQSISSKLEGKIMPVKYEENSLIWVAVDQPVKDNSFLS FT SKVLELCGDLPIFWLKPTYPK" FT mRNA complement(join(AL139089.13:58852..59393, FT AL139089.13:64119..64285,53286851..53287004, FT 53298132..53298245,53307354..53307494,53313166..53313306, FT 53313765..53313915)) FT /gene="LECT1" FT /locus_tag="RP11-93H24.1-001" FT /product="leukocyte cell derived chemotaxin 1" FT /note="match: ESTs: Em:BG900633.1 Em:BQ002945.1 FT Em:CA448941.1 Em:CX757187.1" FT /note="match: cDNAs: Em:AB006000.1 Em:CR541910.1" FT CDS complement(join(AL139089.13:59178..59393, FT AL139089.13:64119..64285,53286851..53287004, FT 53298132..53298245,53307354..53307494,53313166..53313306, FT 53313765..53313836)) FT /gene="LECT1" FT /locus_tag="RP11-93H24.1-001" FT /standard_name="OTTHUMP00000018466" FT /product="leukocyte cell derived chemotaxin 1" FT /note="match: proteins: Sw:O70367.1 Sw:O75829.1 Sw:Q9Z1F6.1 FT Tr:Q5TAM4.1" FT /protein_id="CAI14108.1" FT /translation="MTENSDKVPIALVGPDDVEFCSPPAYATLTVKPSSPARLLKVGAV FT VLISGAVLLLFGAIGAFYFWKGSDSHIYNVHYTMSINGKLQDGSMEIDAGNNLETFKMG FT SGAEEAIAVNDFQNGITGIRFAGGEKCYIKAQVKARIPEVGAVTKQSISSKLEGKIMPV FT KYEENSLIWVAVDQPVKDNSFLSSKVLELCGDLPIFWLKPTYPKEIQRERREVVRKIVP FT TTTKRPHSGPRSNPGAGRLNNETRPSVQEDSQAFNPDNPYHQQEGESMTFDPRLDHEGI FT CCIECRRSYTHCQKICEPLGGYYPWPYNYQGCRSACRVIMPCSWWVARILGMV" FT misc_feature 53364947 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 60bp by restriction digest data" FT misc_feature 53377530 FT /note="Clone_right_end: RP11-93H24" FT misc_feature 53393731 FT /note="Clone_left_end: RP11-103K9" FT CDS 53394632..53395153 FT /pseudo FT /locus_tag="RP11-431O22.2-001" FT /product="peptidylprolyl isomerase A (cyclophilin A) (PPIA) FT pseudogene" FT /note="match: proteins: Sw:P62935.2 Sw:P62936.2 Sw:P62937.2 FT Sw:P62938.2 Sw:Q0ZQL0.3" FT /db_xref="PSEUDO:CAI14109.1" FT misc_feature 53412415..53412444 FT /note="Sequence from overlapping clone bA103K9 (AL136523). FT Assembly confirmed by restriciton digest" FT polyA_site complement(53418109) FT polyA_signal complement(53418132..53418137) FT misc_feature 53419708..53419722 FT /note="Sequence from overlapping clone bA103K9 (AL136523). FT Assembly confirmed by restriciton digest" FT mRNA complement(join(53418109..53419068,53419560..53419767, FT 53419941..53422775)) FT /gene="PCDH8" FT /locus_tag="RP11-431O22.3-001" FT /product="protocadherin 8" FT /note="match: ESTs: Em:CX867223.1" FT /note="match: cDNAs: Em:AF061573.2 Em:BC036025.1" FT CDS complement(join(53418695..53419068,53419560..53419767, FT 53419941..53422571)) FT /gene="PCDH8" FT /locus_tag="RP11-431O22.3-001" FT /standard_name="OTTHUMP00000018464" FT /product="protocadherin 8" FT /note="match: proteins: Sw:O95206.2 Tr:Q5TAN2.1 FT Tr:Q7TSK3.1" FT /protein_id="CAI14110.1" FT /translation="MSPVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTV FT IGTLAEDLHMKVSGDTSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVL FT AFDVVSFSQEQFRLVHVEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDED FT VGANGLQTVRLAEPHSPFRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGR FT PPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDV FT VFAFGARTPPEARRLFRLDPRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKV FT IVRIRDVNDNAPDIAITPLAAPGAPATSPFAAAAAAAALGGADASSPAGAGTPEAGATS FT LVPEGAARESLVALVSTSDRDSGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRE FT RIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENNPPGAYLA FT TVAARDRDLGRNGQVTYRLLEAEVGRAGGAVSTYVSVDPATGAIYALRSFDYETLRQLD FT VRIQASDGGSPQLSSSALVQVRVLDQNDHAPVLVHPAPANGSLEVAVPGRTAKDTVVAR FT VQARDADEGANGELAFELQQQEPREAFAIGRRTGEILLTGDLSQEPPGRVFRALLVISD FT GGRPPLTTTATVSFVVTAGGGRGPAAPASAGSPERSRPPGSRLGVSGSVLQWDTPLIVI FT IVLAGSCTLLLAAIIAIATTCNRRKKEVRKGGALREERPGAAGGGASAPGSPEEAARGA FT GPRPNMFDVLTFPGTGKAPFGSPAADAPPPAVAAAEVPGSEGGSATGESACHFEGQQRL FT RGAHAEPYGASPGFGKEPAPPVAVWKGHSFNTISGREAEKFSGKDSGKGDSDFNDSDSD FT ISGDALKKDLINHMQSGLWACTAECKILGHSDRCWSPSCSGPNAHPSPHPPAQMSTFCK FT STSLPRDPLRRDNYYQAQLPKTVGLQSVYEKVLHRDYDRTVTLLSPPRPGRLPDLQEIG FT VPLYQSPPGRYLSPKKGANENV" FT mRNA complement(join(53418116..53419068,53419560..53419767, FT 53420232..53422640)) FT /gene="PCDH8" FT /locus_tag="RP11-431O22.3-002" FT /product="protocadherin 8" FT /note="match: cDNAs: Em:AK140407.1 Em:AY013873.1" FT CDS complement(join(53418695..53419068,53419560..53419767, FT 53420232..53422571)) FT /gene="PCDH8" FT /locus_tag="RP11-431O22.3-002" FT /standard_name="OTTHUMP00000018465" FT /product="protocadherin 8" FT /note="match: proteins: Tr:Q5TAN1.1 Tr:Q8C824.1" FT /protein_id="CAI14111.1" FT /translation="MSPVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTV FT IGTLAEDLHMKVSGDTSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVL FT AFDVVSFSQEQFRLVHVEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDED FT VGANGLQTVRLAEPHSPFRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGR FT PPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDV FT VFAFGARTPPEARRLFRLDPRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKV FT IVRIRDVNDNAPDIAITPLAAPGAPATSPFAAAAAAAALGGADASSPAGAGTPEAGATS FT LVPEGAARESLVALVSTSDRDSGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRE FT RIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENNPPGAYLA FT TVAARDRDLGRNGQVTYRLLEAEVGRAGGAVSTYVSVDPATGAIYALRSFDYETLRQLD FT VRIQASDGGSPQLSSSALVQVRVLDQNDHAPVLVHPAPANGSLEVAVPGRTAKDTVVAR FT VQARDADEGANGELAFELQQQEPREAFAIGRRTGEILLTGDLSQEPPGRVFRALLVISD FT GGRPPLTTTATVSFVVTAGGGRGPAAPASAGSPERSRPPGSRLGVSGSVLQWDTPLIVI FT IVLAGSCTLLLAAIIAIATTCNRRKKEPYGASPGFGKEPAPPVAVWKGHSFNTISGREA FT EKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGHSDRCWSPS FT CSGPNAHPSPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEKVLHRDYD FT RTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKGANENV" FT misc_feature 53458809 FT /note="Clone_right_end: RP11-431O22" FT misc_feature complement(53504294..53504315) FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature complement(53460909) FT /note="Clone_right_end: RP11-209J19" FT misc_feature 53543769..53667449 FT /note="annotated region of clone" FT misc_feature 53579175 FT /note="Clone_right_end: RP11-103K9" FT mRNA join(53602830..53602951,53603100..53603175, FT 53608483..53608635,53616045..53616167,53624356..53626196) FT /gene="OLFM4" FT /locus_tag="RP11-209J19.1-002" FT /product="olfactomedin 4" FT /note="match: cDNAs: Em:AK000683" FT mRNA join(53602894..53603175,53608483..53608635, FT 53616045..53616257,53617240..53617399,53624104..53626192) FT /gene="OLFM4" FT /locus_tag="RP11-209J19.1-001" FT /product="olfactomedin 4" FT /note="match: ESTs: Em:AI560739.1 Em:AI659775.1 FT Em:AW338713.1 Em:W52120.1" FT /note="match: cDNAs: Em:AY358567.1 Em:BC117329.1" FT CDS join(53602972..53603175,53608483..53608635, FT 53616045..53616257,53617240..53617399,53624104..53624906) FT /gene="OLFM4" FT /locus_tag="RP11-209J19.1-001" FT /standard_name="OTTHUMP00000018468" FT /product="olfactomedin 4" FT /note="match: proteins: Tr:Q6UX06.1" FT /protein_id="CAH71311.2" FT /translation="MRPGLSFLLALLFFLGQAAGDLGDVGPPIPSPGFSSFPGVDSSSS FT FSSSSRSGSSSSRSLGSGGSVSQLFSNFTGSVDDRGTCQCSVSLPDTTFPVDRVERLEF FT TAHVLSQKFEKELSKVREYVQLISVYEKKLLNLTVRIDIMEKDTISYTELDFELIKVEV FT KEMEKLVIQLKESFGGSSEIVDQLEVEIRNMTLLVEKLETLDKNNVLAIRREIVALKTK FT LKECEASKDQNTPVVHPPPTPGSCGHGGVVNISKPSVVQLNWRGFSYLYGAWGRDYSPQ FT HPNKGLYWVAPLNTDGRLLEYYRLYNTLDDLLLYINARELRITYGQGSGTAVYNNNMYV FT NMYNTGNIARVNLTTNTIAVTQTLPNAAYNNRFSYANVAWQDIDFAVDENGLWVIYSTE FT ASTGNMVISKLNDTTLQVLNTWYTKQYKPSASNAFMVCGVLYATRTMNTRTEEIFYYYD FT TNTGKEGKLDIVMHKMQEKVQSINYNPFDQKLYVYNDGYLLNYDLSVLQKPQ" FT misc_feature 53615891..53615899 FT /note="Tn10 transposon removed from here" FT polyA_signal 53626163..53626168 FT polyA_signal 53626171..53626176 FT polyA_site 53626192 FT polyA_site 53626196 FT polyA_signal 53626261..53626266 FT misc_feature complement(53667450..53843405) FT /note="annotated region of clone" FT CDS 53774116..53776547 FT /pseudo FT /locus_tag="RP11-24H2.1-001" FT /product="protocadherin 8 (PCDH8) pseudogene" FT /note="match: proteins: Sw:O95206 Sw:Q9Y5G3 Tr:Q9JKP3 FT Tr:Q9WVR2" FT mRNA complement(join(53720674..53721037,53722392..53722499, FT 53725839..53725943)) FT /locus_tag="RP11-24H2.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AW303400" FT misc_feature complement(53667450) FT /note="Clone_left_end: RP11-24H2" FT misc_feature 53904318 FT /note="Clone_left_end: RP11-384G23" FT misc_feature 53956374 FT /note="Clone_right_end: RP11-190J12" FT misc_feature 54013904..54013951 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 54057332 FT /note="Clone_left_end: RP11-77O2" FT misc_feature 54075756 FT /note="Clone_right_end: RP11-384G23" FT misc_feature 54119339 FT /note="Clone_left_end: RP11-768P11" FT misc_feature 54197084 FT /note="Clone_right_end: RP11-77O2" FT misc_feature 54253586 FT /note="Clone_left_end: RP11-4D11" FT misc_feature 54352724 FT /note="Clone_left_end: RP11-474J1" FT misc_feature 54425349 FT /note="Clone_right_end: RP11-4D11" FT misc_feature 54502404 FT /note="Clone_left_end: RP11-59A15" FT misc_feature 54543748 FT /note="Clone_right_end: RP11-474J1" FT misc_feature 54644128 FT /note="Clone_left_end: RP11-168P6" FT misc_feature 54644328..54725281 FT /note="annotated region of clone" FT misc_feature 54682909 FT /note="Clone_right_end: RP11-59A15" FT mRNA complement(join(54698459..54698890,54701415..54701564, FT 54705009..54705206,54706497..54706748)) FT /locus_tag="RP11-168P6.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC018008 Em:BC020935" FT mRNA complement(join(54689924..54690344,54695071..54695179, FT 54699284..54699407,54701415..54701564,54706748..54707001)) FT /locus_tag="RP11-168P6.1-003" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC026300" FT mRNA complement(join(54700997..54701564,54705009..54705206, FT 54706748..54707001)) FT /locus_tag="RP11-168P6.1-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:BC017942" FT misc_feature 54725082 FT /note="Clone_left_end: RP11-240M20" FT misc_feature 54874765 FT /note="Clone_right_end: RP11-240M20" FT misc_feature 55001573 FT /note="Clone_left_end: RP11-365K22" FT misc_feature 55001773..55085399 FT /note="annotated region of clone" FT mRNA complement(55014797..55015471) FT /locus_tag="RP11-365K22.1-001" FT /product="novel protein similar to ribosomal protein L13a FT RPL13A" FT /note="match: ESTs: Em:BG701888 Em:BG702274 Em:BG702327 FT Em:BG707392 Em:BG714723 Em:BI602604 Em:BI602741 Em:BM564623 FT Em:BM767161 Em:BM990047" FT /note="match: cDNAs: Em:BC001675 Em:BC013230" FT CDS complement(55014839..55015450) FT /locus_tag="RP11-365K22.1-001" FT /standard_name="OTTHUMP00000018470" FT /product="novel protein similar to ribosomal protein L13a FT RPL13A" FT /note="match: proteins: Sw:P19253 Sw:P35427 Sw:P40429 FT Tr:Q5M9M0 Tr:Q9BSQ6 Tr:Q9XSU0" FT /protein_id="CAH73036.1" FT /translation="MAEVQVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISG FT NFYRNKLNYLAFLRKRMNTSPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKV FT SDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEK FT AKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV" FT misc_feature 55035941..55036111 FT /note="Sequence from overlapping clone AL356312. Assembly FT confirmed by restriction digest" FT misc_feature 55085200 FT /note="Clone_left_end: RP11-322F18" FT misc_feature 55181096 FT /note="Clone_right_end: RP11-365K22" FT misc_feature 55250817 FT /note="Clone_right_end: RP11-322F18" FT misc_feature 55259234 FT /note="Clone_left_end: RP11-150L4" FT misc_feature 55392919 FT /note="Clone_right_end: RP11-536C2" FT misc_feature 55411064 FT /note="Clone_right_end: RP11-150L4" FT misc_feature 55525704 FT /note="Clone_left_end: RP11-456B18" FT misc_feature 55563710 FT /note="Clone_right_end: RP11-108H9" FT misc_feature 55633951 FT /note="Clone_left_end: RP11-78L16" FT misc_feature 55640856..55641009 FT /note="Sequence from overlapping clone bA377G2 FT (AL357337).Assembly confirmed by restriction digest" FT misc_feature 55652861..55652971 FT /note="Sequence from overlapping clone bA377G2 FT (AL357337).Assembly confirmed by restriction digest" FT misc_feature 55671803..55671836 FT /note="Sequence from overlapping clone bA377G2 FT (AL357337).Assembly confirmed by restriction digest" FT misc_feature 55706266 FT /note="Clone_right_end: RP11-456B18" FT misc_feature 55756905..55756931 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 55761321 FT /note="Clone_left_end: RP13-407F1" FT misc_feature complement(55765321) FT /note="Clone_left_end: RP13-407F1" FT misc_feature 56122812 FT /note="Clone_left_end: RP11-538N17" FT misc_feature 56131020..56131113 FT /note="Sequence from AC025359. Sequenced by WIBR" FT misc_feature 56210001..56210227 FT /note="Sequence confirmed by AC025359. Sequenced by WIBR" FT misc_feature 56210228..56210446 FT /note="Sequence from AC025359. Sequenced by WIBR" FT misc_feature 56322898 FT /note="Clone_right_end: RP11-538N17" FT misc_feature 56377611 FT /note="Clone_left_end: RP11-154G15" FT misc_feature 56474288 FT /note="Clone_left_end: RP11-478B20" FT misc_feature 56530661 FT /note="Clone_left_end: RP11-10O23" FT misc_feature 56532761..56705002 FT /note="annotated region of clone" FT CDS complement(56573355..56574582) FT /pseudo FT /locus_tag="RP11-10O23.1-001" FT /product="hepatocyte nuclear factor 4, alpha (HNF4A) FT pseudogene" FT /note="match: proteins: Sw:P22449 Sw:P41235 Sw:P49698 FT Sw:P49866 Sw:P51129 Sw:P79926 Sw:Q91766 Sw:Q9WUU6 Tr:O46174 FT Tr:O46175 Tr:Q9JJI9 Tr:Q9VLI7" FT misc_feature 56614408..56614416 FT /note="Sequence from overlapping clone bA144D6 (AL138683) FT Assembly confirmed by restriction digest data" FT misc_feature 56666431..56666454 FT /note="Sequence from overlapping clone bA144D6 (AL138683). FT Assembly confirmed by restriction digest data" FT misc_feature 56703335 FT /note="Clone_right_end: RP11-144D6" FT misc_feature 56704902 FT /note="Clone_right_end: RP11-10O23" FT misc_feature 56705003..56819876 FT /note="annotated region of clone" FT CDS join(56788507..56788679,56789195..56791076) FT /pseudo FT /locus_tag="RP11-252B20.1-001" FT /product="spermatogenesis associated 2 (SPATA2) pseudogene" FT /note="match: proteins: Sw:Q9UM82 Tr:Q91XS7" FT misc_feature 56815877 FT /note="Clone_left_end: RP11-516G5" FT misc_feature 56858050..56858147 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 56903608 FT /note="Clone_left_end: RP11-399N11" FT misc_feature 56954037..56954106 FT /note="Sequence from reads from a short insert library FT derived from a single pUC clone. Restriction digest data FT confirm the assembly" FT misc_feature 56985673 FT /note="Clone_right_end: RP11-516G5" FT misc_feature 56989508 FT /note="Clone_left_end: RP11-505I19" FT misc_feature 56989509 FT /note="Clone_left_end: RP11-505I19" FT misc_feature 57000511..57000767 FT /note="Sequence from overlapping clone AL390375. Assembly FT confirmed by restriction digest data" FT misc_feature 57066824 FT /note="Clone_right_end: RP11-399N11" FT misc_feature 57137743 FT /note="Clone_left_end: RP11-173M10" FT misc_feature 57147237 FT /note="Clone_right_end: RP11-505I19" FT misc_feature 57240760 FT /note="Clone_left_end: RP11-186A13" FT misc_feature 57294770 FT /note="Clone_right_end: RP11-173M10" FT misc_feature 57344391 FT /note="Clone_left_end: RP11-305F4" FT misc_feature 57344584..57344746 FT /note="Sequence from overlapping clone bA186A13 (AL353646). FT Assembly confirmed by restriction digest" FT misc_feature 57405065 FT /note="Clone_right_end: RP11-186A13" FT misc_feature 57443989 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 235bps by restriction digest data" FT misc_feature 57446419..57446682 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm the assembly" FT misc_feature 57452328 FT /note="Clone_left_end: RP11-340B1" FT misc_feature 57493134 FT /note="Clone_right_end: RP11-305F4" FT misc_feature 57625524 FT /note="Clone_left_end: RP11-279F15" FT misc_feature 57637004 FT /note="Clone_right_end: RP11-340B1" FT misc_feature 57702461 FT /note="Clone_left_end: RP11-100C24" FT misc_feature 57713199..57746846 FT /note="Tandem repeat. 5 copies of a 6.5Kb direct repeat. FT Assembly is consistant with restriction digest" FT misc_feature 57714208..57714281 FT /note="Sequence from overlapping clone bA100C24 (AL353657). FT Assembly confirmed by restriction digest data" FT misc_feature 57714282..57714456 FT /note="Sequence from overlapping clone bA100C24 (AL353657). FT Assembly confirmed by restriction digest" FT misc_feature 57720329..57720352 FT /note="Single clone region. Sequence from overlapping clone FT bA100C24 (AL353657) only. Assembly confirmed by restriction FT digest" FT misc_feature 57726888..57726905 FT /note="Single clone region. Single read sequenced with dGTP FT big dye terminator chemistry. Assembly confirmed by FT restriction digest data" FT misc_feature 57733188..57733202 FT /note="Sequence from overlapping clone bA100C24 (AL353657). FT Assembly confirmed by restriction digest" FT misc_feature 57733203..57733319 FT /note="Sequence from overlapping clone bA100C24 (AL353657). FT Assembly confirmed by restriction digest" FT misc_feature 57733320..57733469 FT /note="equence from overlapping clone bA100C24 (AL353657). FT Assembly confirmed by restriction digest" FT misc_feature 57733471..57733485 FT /note="equence from overlapping clone bA100C24 (AL353657). FT Assembly confirmed by restriction digest" FT misc_feature 57740028..57740043 FT /note="Single clone region. Assembly confirmed by FT restriction digest" FT misc_feature 57752461..57831960 FT /note="annotated region of clone" FT CDS 57778513..57778933 FT /pseudo FT /locus_tag="RP11-100C24.1-001" FT /product="mitochondrial cytochrome c oxidase II (MTCO2) FT pseudogene" FT /note="match: proteins: Sw:P00405 Sw:P05490 Sw:P26455 FT Sw:P26857 Sw:P48869 Sw:P98012 Sw:Q37430 Tr:O79028 Tr:O99987 FT Tr:Q7JCZ1 Tr:Q7JD03 Tr:Q94SA0 Tr:Q94VP4 Tr:Q94VQ0 Tr:Q94VQ4 FT Tr:Q94VQ6 Tr:Q94VR6 Tr:Q9B682 Tr:Q9B684 Tr:Q9G1F3 Tr:Q9G5S8 FT Tr:Q9MD65 Tr:Q9MM58 Tr:Q9XK16 Tr:Q9XN08" FT misc_feature 57783312..57783359 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 57783621..57783694 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 57831860 FT /note="Clone_right_end: RP11-100C24" FT misc_feature 57874799 FT /note="Clone_left_end: RP11-640E11" FT misc_feature complement(57874999..57967077) FT /note="annotated region of clone" FT CDS join(57888873..57889599,57889902..57890043) FT /pseudo FT /locus_tag="RP11-640E11.1-001" FT /product="solute carrier family 25 (mitochondrial carrier; FT adenine nucleotide translocator), member 5 (SLC25A5) FT pseudogene" FT /note="match: proteins: Sw:O46373 Sw:P02722 Sw:P05141 FT Sw:P12235 Sw:P12235 Sw:P31691 Sw:P31692 Sw:P48962 Sw:P48962 FT Sw:P51881 Sw:P51881 Sw:Q05962 Sw:Q09073 Sw:Q27238 Sw:Q41629 FT Sw:Q41630 Sw:Q8SQH5 Tr:O01813 Tr:O62526 Tr:O74260 Tr:O76467 FT Tr:P91270 Tr:P91410 Tr:Q17407 Tr:Q18683 Tr:Q21103 Tr:Q21809 FT Tr:Q25129 Tr:Q25692 Tr:Q26006 Tr:Q26130 Tr:Q29368 Tr:Q41628 FT Tr:Q545A2 Tr:Q545A2 Tr:Q7LNP2 Tr:Q7LNP2 Tr:Q8TFA7 Tr:Q91336 FT Tr:Q9FM86 Tr:Q9H0C2 Tr:Q9I9M9 Tr:Q9PRH1 Tr:Q9PRH2 FT Tr:Q9YIC4" FT misc_feature complement(57875098) FT /note="Clone_right_end: RP11-111C7" FT misc_feature complement(57967078) FT /note="Clone_left_end: RP11-111C7" FT misc_feature 58115839..58210211 FT /note="annotated region of clone" FT mRNA join(58205944..58209245,AL445216.6:30491..30549, FT AL445216.6:30676..30856,AL445216.6:88635..89584) FT /gene="PCDH17" FT /locus_tag="RP11-204N9.1-002" FT /product="protocadherin 17" FT /note="match: cDNAs: Em:AF029343" FT mRNA join(58206655..58209245,AL445216.6:30491..30549, FT AL445216.6:30684..30856,AL445216.6:88635..93334) FT /gene="PCDH17" FT /locus_tag="RP11-204N9.1-001" FT /product="protocadherin 17" FT /note="match: cDNAs: Em:AK001134 Em:AL137503 Em:AL137505 FT Em:BC028165" FT /note="match: ESTs: Em:AA249856 Em:AA323033 Em:AA436070 FT Em:AA554165 Em:AA884911 Em:AA928139 Em:AA984931 Em:AI126298 FT Em:AI217125 Em:AI289225 Em:AI638780 Em:AI936680 Em:AU119437 FT Em:AU137547 Em:AW436922 Em:AW469907 Em:AW952705 Em:AW973681 FT Em:BB617928 Em:BE644910 Em:BF079330 Em:BF511144 Em:BG087770 FT Em:BI917026 Em:BM128787 Em:BM272327 Em:BM817816 Em:BM817862 FT Em:BQ180669 Em:BQ557422 Em:F13070 Em:N78414 Em:R15207" FT CDS join(58206681..58209245,AL445216.6:30491..30549, FT AL445216.6:30684..30856,AL445216.6:88635..89317) FT /gene="PCDH17" FT /locus_tag="RP11-204N9.1-001" FT /standard_name="OTTHUMP00000018476" FT /product="protocadherin 17" FT /note="match: proteins: Sw:O14917 Sw:Q8TAB3" FT /protein_id="CAI17092.1" FT /translation="MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGRDARLQ FT PGLPPAERGGGGRSKSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQL FT SLEVFANDKEICMIKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPDAGE FT NGLRTYLLTRDDHGLFGLDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPP FT RSATVQINVKVIDSNDNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYS FT FSSYVPDRVRELFSIDPKTGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVK FT LIDRNDNAPSIGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGG FT GGGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSF FT AIKILDENDNPPRFTKGLYVLQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIG FT DVSIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDV FT NDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHL FT FEIDPSSGEIRTLHPFWEDVTPVVELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPR FT VNGEQHHWDMSLPLIVTLSTISIILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLG FT GGKGKKKKINKNDIMLVQSEVEERNAMNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSE FT VMYLKPASNNLTVPQGHAGCHTSFTGQGTNASETPATRMSIIQTDNFPAEPNYMGSRQQ FT FVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPL FT EQEPEECVNCTDECRVLGHSDRCWMPQFPAANQAENADYRTNLFVPTVEANVETETYET FT VNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPSASSSPTKACIEPCT FT STKGSLDGCEAKPGALAEASSQYLPTDSQYLSPSKQPRDPPFMASDQMARVFADVHSRA FT SRDSSEMGAVLEQLDHPNRDLGRESVDAEEVVREIDKLLQDCRGNDPVAVRK" FT misc_feature 58210012 FT /note="Clone_left_end: RP11-204N9" FT misc_feature 58210212..58309403 FT /note="annotated region of clone" FT misc_feature 58263842 FT /note="Clone_right_end: RP11-95F22" FT mRNA join(AL445288.9:90206..93507,58240602..58240660, FT 58240787..58240967,58298746..58299695) FT /gene="PCDH17" FT /locus_tag="RP11-204N9.1-002" FT /product="protocadherin 17" FT /note="match: cDNAs: Em:AF029343" FT mRNA join(AL445288.9:90917..93507,58240602..58240660, FT 58240795..58240967,58298746..58303445) FT /gene="PCDH17" FT /locus_tag="RP11-204N9.1-001" FT /product="protocadherin 17" FT /note="match: cDNAs: Em:AK001134 Em:AL137503 Em:AL137505 FT Em:BC028165" FT /note="match: ESTs: Em:AA249856 Em:AA323033 Em:AA436070 FT Em:AA554165 Em:AA884911 Em:AA928139 Em:AA984931 Em:AI126298 FT Em:AI217125 Em:AI289225 Em:AI638780 Em:AI936680 Em:AU119437 FT Em:AU137547 Em:AW436922 Em:AW469907 Em:AW952705 Em:AW973681 FT Em:BB617928 Em:BE644910 Em:BF079330 Em:BF511144 Em:BG087770 FT Em:BI917026 Em:BM128787 Em:BM272327 Em:BM817816 Em:BM817862 FT Em:BQ180669 Em:BQ557422 Em:F13070 Em:N78414 Em:R15207" FT CDS join(AL445288.9:90943..93507,58240602..58240660, FT 58240795..58240967,58298746..58299428) FT /gene="PCDH17" FT /locus_tag="RP11-204N9.1-001" FT /standard_name="OTTHUMP00000018476" FT /product="protocadherin 17" FT /note="match: proteins: Sw:O14917 Sw:Q8TAB3" FT /protein_id="CAH71250.1" FT /translation="MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGRDARLQ FT PGLPPAERGGGGRSKSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQL FT SLEVFANDKEICMIKVEIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPDAGE FT NGLRTYLLTRDDHGLFGLDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPP FT RSATVQINVKVIDSNDNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYS FT FSSYVPDRVRELFSIDPKTGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVK FT LIDRNDNAPSIGFVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGG FT GGGLGGPGGSVPFKLEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSF FT AIKILDENDNPPRFTKGLYVLQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIG FT DVSIYTYVSVNPTNGAIYALRSFNFEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDV FT NDNAPVIVLPTLQNDTAELQVPRNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHL FT FEIDPSSGEIRTLHPFWEDVTPVVELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPR FT VNGEQHHWDMSLPLIVTLSTISIILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLG FT GGKGKKKKINKNDIMLVQSEVEERNAMNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSE FT VMYLKPASNNLTVPQGHAGCHTSFTGQGTNASETPATRMSIIQTDNFPAEPNYMGSRQQ FT FVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPL FT EQEPEECVNCTDECRVLGHSDRCWMPQFPAANQAENADYRTNLFVPTVEANVETETYET FT VNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPSASSSPTKACIEPCT FT STKGSLDGCEAKPGALAEASSQYLPTDSQYLSPSKQPRDPPFMASDQMARVFADVHSRA FT SRDSSEMGAVLEQLDHPNRDLGRESVDAEEVVREIDKLLQDCRGNDPVAVRK" FT polyA_signal 58303425..58303430 FT polyA_site 58303445 FT misc_feature 58309204 FT /note="Clone_left_end: RP11-435P18" FT misc_feature 58327035..58327147 FT /note="Clone PCR products only. Assembly is consistent with FT restriction digest" FT misc_feature 58327148..58327179 FT /note="Single clone region. Single clone region consisting FT of PCR product. Assembly consistent with restriction FT digest" FT misc_feature 58376195..58376353 FT /note="Clone PCRs only. Assembly consistent with FT restriction digest" FT misc_feature 58382440 FT /note="Clone_left_end: RP11-425K10" FT misc_feature 58509262 FT /note="Clone_right_end: RP11-435P18" FT misc_feature 58523781 FT /note="Clone_left_end: RP11-98F3" FT misc_feature 58558864 FT /note="Clone_right_end: RP11-425K10" FT misc_feature 58674216..58674279 FT /note="Sequence confirmed by AC016515. Sequenced by WIBR" FT misc_feature 58680713 FT /note="Clone_right_end: RP11-98F3" FT misc_feature 58729367 FT /note="Clone_left_end: RP11-538C21" FT misc_feature 58733367..58882303 FT /note="annotated region of clone" FT mRNA join(58785825..58785962,58789762..58789819, FT 58795273..58795404,58796002..58796063,58801690..58801750, FT 58803272..58803344,58806969..58807251) FT /locus_tag="RP11-538C21.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG190276" FT misc_feature 58880204 FT /note="Clone_left_end: RP11-168J5" FT misc_feature 58896401 FT /note="Clone_right_end: RP11-538C21" FT misc_feature 58996357 FT /note="Clone_left_end: RP11-376H15" FT misc_feature 59046889 FT /note="Clone_right_end: RP11-168J5" FT misc_feature 59046990..59169805 FT /note="annotated region of clone" FT CDS 59102749..59105160 FT /pseudo FT /locus_tag="RP11-339I24.1-001" FT /product="CTAGE family, member 5 (CTAGE5) pseudogene" FT /note="match: proteins: Sw:O15320 Sw:Q8IX94 Tr:Q92580 FT Tr:Q96N90" FT misc_feature 59169705 FT /note="Clone_right_end: RP11-339I24" FT misc_feature 59202565 FT /note="Clone_left_end: RP11-303J13" FT misc_feature 59284659 FT /note="Clone_left_end: RP11-522F22" FT misc_feature 59286759..59443793 FT /note="annotated region of clone" FT misc_feature 59313279 FT /note="Tandem repeat. Forced join. Assembly confirmed by FT restriction digest data" FT CDS complement(59325181..59326367) FT /pseudo FT /locus_tag="RP11-522F22.1-001" FT /product="DnaJ (Hsp40) homolog, subfamily A, member 1 FT (DNAJA1) pseudogene" FT /note="match: proteins: Sw:P31689 Sw:P31689 Sw:P63036 FT Sw:Q8WW22 Sw:Q9JMC3 Tr:Q95JF4 Tr:Q9VFV9" FT misc_feature 59366821 FT /note="Clone_right_end: RP11-303J13" FT misc_feature 59443594 FT /note="Clone_left_end: RP11-334O13" FT misc_feature 59443794..59606456 FT /note="annotated region of clone" FT misc_feature 59453964 FT /note="Clone_right_end: RP11-522F22" FT misc_feature 59469913 FT /note="Weak data" FT misc_feature 59569478 FT /note="Clone_left_end: RP11-105A24" FT CDS complement(59584508..59584740) FT /pseudo FT /locus_tag="RP11-334O13.1-001" FT /product="high-mobility group pseudogene." FT misc_feature 59606356 FT /note="Clone_right_end: RP11-334O13" FT misc_feature 59606457..59720240 FT /note="annotated region of clone" FT misc_feature 59640274..59640925 FT /note="Sequence confirmed by AC024276 sequenced by WIBR" FT CDS complement(59645596..59645937) FT /pseudo FT /locus_tag="RP11-105A24.1-001" FT /product="polymerase (RNA) III (DNA directed) polypeptide K FT (POLR3K) pseudogene" FT /note="match: proteins: Sw:Q9CQZ7 Sw:Q9CQZ7 Sw:Q9CQZ7 FT Sw:Q9Y2Y1 Sw:Q9Y2Y1 Sw:Q9Y2Y1 Tr:Q8SYJ9" FT misc_feature 59648075..59648318 FT /note="Sequence confirmed by AC024276 sequenced by WIBR" FT misc_feature 59675558..59675659 FT /note="Sequence confirmed by AC024276 sequenced by WIBR" FT misc_feature 59675623..59675626 FT /note="Sequence from AC024276 sequenced by WIBR" FT misc_feature 59678584..59678626 FT /note="Sequence confirmed by AC024276 sequenced by WIBR" FT misc_feature 59720041 FT /note="Clone_left_end: RP11-524F1" FT misc_feature 59720260 FT /note="Clone_right_end: RP11-105A24" FT misc_feature 59765956..59765962 FT /note="1012 bases of Tn10 transposon (J01829) removed from FT here. This sequence represents the duplicated flanking FT seqence of the Tn10" FT misc_feature 59840781 FT /note="Clone_left_end: RP11-142D16" FT misc_feature 59886476 FT /note="Clone_right_end: RP11-524F1" FT misc_feature 59901627..59901855 FT /note="Sequence confirmed by AC023923 sequenced by WIBR" FT misc_feature 59901856..59902026 FT /note="Sequence from AC023923 sequenced by WIBR" FT misc_feature 59902362..59902550 FT /note="Sequence confirmed by AC023923 sequenced by WIBR" FT misc_feature 59904422 FT /note="Clone_left_end: RP11-58K5" FT misc_feature 59993894 FT /note="Clone_right_end: RP11-142D16" FT misc_feature 60075489 FT /note="Clone_right_end: RP11-58K5" FT misc_feature 60103949 FT /note="Clone_left_end: RP11-26P21" FT misc_feature 60107949..60312355 FT /note="annotated region of clone" FT mRNA complement(join(60239717..60240980,AL354829.8:5191..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL390878.6:195117..195293, FT AL356502.21:6370..6402,AL356502.21:37000..37271)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-001" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AY750055.1" FT /note="match: ESTs: Em:AA977039.1 Em:CA310418.1" FT CDS complement(join(60240718..60240980,AL354829.8:5191..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL390878.6:195117..195293, FT AL356502.21:6370..6402,AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-001" FT /standard_name="OTTHUMP00000018480" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM15405.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFHLNIRTLTDDMLDKFASIRIPGSKKERPPLPNLKTAFASSDCSA FT APLEMMENFPKPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYINTAS FT KTGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLL FT LDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRH FT PNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVA FT CMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEED FT LFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYF FT KLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFE FT KEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALP FT PPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLK FT PKKEFKPEISMRRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERR FT EEEDIEEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESM FT IQNLIKHLPDQEQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQ FT VNNIKPDIMAVSTACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLK FT DTKSADQKTTLLHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQ FT QLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDV FT KKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKR FT LLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHE FT NQKVQLTEGSRSHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKK FT ETELLGSFSKNESVPEVEALLARLRAL" FT mRNA complement(join(60240718..60240980,AL354829.8:5191..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL390878.6:195117..195293, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-005" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244756.1" FT CDS complement(join(60240718..60240980,AL354829.8:5191..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL390878.6:195117..195293, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-005" FT /standard_name="OTTHUMP00000180578" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM15406.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFLDKFASIRIPGSKKERPPLPNLKTAFASSDCSAAPLEMMENFPK FT PLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYINTASKTGSLKRSRQI FT SPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLLLDILEKLISGK FT IQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRHPNMMTDVVKLL FT SAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVACMQLINALVTS FT PDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEEDLFELSHRLEDI FT RAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYFKLIDECVSQIV FT LHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFEKEFTDHQETQA FT ELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGV FT PPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISM FT RRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSI FT KKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQ FT EQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAV FT STACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTL FT LHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEKELETFPP FT PEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDVKKVSVEDFLTD FT LNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKRLLEMKTEGDET FT GVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHENQKVQLTEGSR FT SHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKKETELLGSFSKN FT ESVPEVEALLARLRAL" FT mRNA complement(join(60240718..60240980,AL354829.8:5191..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-006" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244758.1" FT CDS complement(join(60240718..60240980,AL354829.8:5191..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-006" FT /standard_name="OTTHUMP00000180579" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM15403.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFEDMNLNEDKKAPLREKDFSIKKEMVMQYINTASKTGSLKRSRQI FT SPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLLLDILEKLISGK FT IQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRHPNMMTDVVKLL FT SAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVACMQLINALVTS FT PDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEEDLFELSHRLEDI FT RAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYFKLIDECVSQIV FT LHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFEKEFTDHQETQA FT ELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGV FT PPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISM FT RRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSI FT KKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQ FT EQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAV FT STACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTL FT LHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEKELETFPP FT PEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDVKKVSVEDFLTD FT LNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKRLLEMKTEGDET FT GVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHENQKVQLTEGSR FT SHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKKETELLGSFSKN FT ESVPEVEALLARLRAL" FT mRNA complement(join(60240718..60240980,AL354829.8:5191..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:195117..195293,AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-007" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244757.1" FT CDS complement(join(60240718..60240980,AL354829.8:5191..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:195117..195293,AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-007" FT /standard_name="OTTHUMP00000180580" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM15404.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFLDKFASIRIPGSKKERPPLPNLKTAFASSDCSAAPLEMMENFPK FT PLSENELLELFEKMMGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVS FT WVESFGHEGLGLLLDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEER FT SLSLLAKAVDPRHPNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIV FT EGLRHNSVQLQVACMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLD FT IQLKVFDEHKEEDLFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLL FT LIRNDYFIRQQYFKLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEE FT FEEKASELYKKFEKEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLP FT PSKEGGTGHSALPPPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQ FT NSPPLPILPFGLKPKKEFKPEISMRRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCK FT LENTFCCQQKERREEEDIEEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMM FT ILEVDETRLAESMIQNLIKHLPDQEQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPR FT LSAILFKLQFEEQVNNIKPDIMAVSTACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQ FT TFGFNLSSLCKLKDTKSADQKTTLLHFLVEICEEKYPDILNFVDDLEPLDKASKVSVET FT LEKNLRQMGRQLQQLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEK FT LYQSIIGYYAIDVKKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELA FT ERERLERQQKKKRLLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSP FT MSQRPVLKVCNHENQKVQLTEGSRSHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAE FT KKEACNVESNRKKETELLGSFSKNESVPEVEALLARLRAL" FT misc_feature 60183416..60183445 FT /note="Sequence confirmed by AC021067 sequenced by BCM" FT misc_feature 60228023..60228028 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 60228072..60228160 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT polyA_site complement(60239724) FT polyA_signal complement(60239745..60239750) FT mRNA complement(join(60240875..60240980,60269386..60269579, FT 60270160..60270327)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-004" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: ESTs: Em:BG207236.1" FT misc_feature 60310355 FT /note="Clone_right_end: RP11-26P21" FT misc_feature 60312356..60345132 FT /note="annotated region of clone" FT misc_feature 60341133 FT /note="Clone_left_end: RP11-218B22" FT misc_feature 60345133..60497344 FT /note="annotated region of clone" FT polyA_site complement(60348193) FT polyA_signal complement(60348207..60348212) FT mRNA complement(join(60348193..60348382,60348862..60348957, FT 60384922..60385057,60407241..60407405,60413458..60413582, FT 60435541..60435670,60453363..60453602,60485869..60485970, FT 60490289..60490383,AL390878.6:7882..7977, FT AL390878.6:53051..53165,AL390878.6:53959..54267, FT AL390878.6:57459..57563,AL390878.6:63902..63966, FT AL390878.6:66876..66994,AL390878.6:74265..74381, FT AL390878.6:75175..75293,AL390878.6:75580..75690, FT AL390878.6:91651..91756,AL390878.6:93640..93776, FT AL390878.6:99020..99089,AL390878.6:99178..99252, FT AL390878.6:125797..125927,AL390878.6:176735..176839, FT AL390878.6:195117..195293,AL356502.21:6370..6402, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-003" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AY818645.1" FT /note="match: ESTs: Em:AA780384.1 Em:AW971904.1" FT CDS complement(join(60348303..60348382,60348862..60348957, FT 60384922..60385057,60407241..60407405,60413458..60413582, FT 60435541..60435670,60453363..60453602,60485869..60485970, FT 60490289..60490383,AL390878.6:7882..7977, FT AL390878.6:53051..53165,AL390878.6:53959..54267, FT AL390878.6:57459..57563,AL390878.6:63902..63966, FT AL390878.6:66876..66994,AL390878.6:74265..74381, FT AL390878.6:75175..75293,AL390878.6:75580..75690, FT AL390878.6:91651..91756,AL390878.6:93640..93776, FT AL390878.6:99020..99089,AL390878.6:99178..99252, FT AL390878.6:125797..125927,AL390878.6:176735..176839, FT AL390878.6:195117..195293,AL356502.21:6370..6402, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-003" FT /standard_name="OTTHUMP00000180577" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: proteins: Tr:Q2KPB6.1" FT /protein_id="CAI39757.2" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFHLNIRTLTDDMLDKFASIRIPGSKKERPPLPNLKTAFASSDCSA FT APLEMMENFPKPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYINTAS FT KTGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLL FT LDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRH FT PNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVA FT CMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEED FT LFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYF FT KLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFE FT KEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALP FT PPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLK FT PKKEFKPEISMRRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERR FT EEEDIEEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESM FT IQNLIKHLPDQEQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQ FT VNNIKPDIMAVSTACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLK FT DTKSADQKTTLLHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQ FT QLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDV FT KKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKR FT LLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHG FT NKPYL" FT mRNA complement(join(AL359266.14:133769..135032, FT 60348323..60348382,60348862..60348957,60384922..60385057, FT 60407241..60407405,60413458..60413582,60435541..60435670, FT 60453363..60453602,60485869..60485970,60490289..60490383, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL390878.6:195117..195293, FT AL356502.21:6370..6402,AL356502.21:37000..37271)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-001" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AY750055.1" FT /note="match: ESTs: Em:AA977039.1 Em:CA310418.1" FT CDS complement(join(AL359266.14:134770..135032, FT 60348323..60348382,60348862..60348957,60384922..60385057, FT 60407241..60407405,60413458..60413582,60435541..60435670, FT 60453363..60453602,60485869..60485970,60490289..60490383, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL390878.6:195117..195293, FT AL356502.21:6370..6402,AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-001" FT /standard_name="OTTHUMP00000018480" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM14267.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFHLNIRTLTDDMLDKFASIRIPGSKKERPPLPNLKTAFASSDCSA FT APLEMMENFPKPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYINTAS FT KTGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLL FT LDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRH FT PNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVA FT CMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEED FT LFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYF FT KLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFE FT KEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALP FT PPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLK FT PKKEFKPEISMRRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERR FT EEEDIEEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESM FT IQNLIKHLPDQEQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQ FT VNNIKPDIMAVSTACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLK FT DTKSADQKTTLLHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQ FT QLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDV FT KKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKR FT LLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHE FT NQKVQLTEGSRSHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKK FT ETELLGSFSKNESVPEVEALLARLRAL" FT mRNA complement(join(AL359266.14:134770..135032, FT 60348323..60348382,60348862..60348957,60384922..60385057, FT 60407241..60407405,60413458..60413582,60435541..60435670, FT 60453363..60453602,60485869..60485970,60490289..60490383, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL390878.6:195117..195293, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-005" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244756.1" FT CDS complement(join(AL359266.14:134770..135032, FT 60348323..60348382,60348862..60348957,60384922..60385057, FT 60407241..60407405,60413458..60413582,60435541..60435670, FT 60453363..60453602,60485869..60485970,60490289..60490383, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL390878.6:195117..195293, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-005" FT /standard_name="OTTHUMP00000180578" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAI39756.2" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFLDKFASIRIPGSKKERPPLPNLKTAFASSDCSAAPLEMMENFPK FT PLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYINTASKTGSLKRSRQI FT SPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLLLDILEKLISGK FT IQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRHPNMMTDVVKLL FT SAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVACMQLINALVTS FT PDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEEDLFELSHRLEDI FT RAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYFKLIDECVSQIV FT LHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFEKEFTDHQETQA FT ELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGV FT PPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISM FT RRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSI FT KKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQ FT EQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAV FT STACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTL FT LHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEKELETFPP FT PEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDVKKVSVEDFLTD FT LNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKRLLEMKTEGDET FT GVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHENQKVQLTEGSR FT SHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKKETELLGSFSKN FT ESVPEVEALLARLRAL" FT mRNA complement(join(AL359266.14:134770..135032, FT 60348323..60348382,60348862..60348957,60384922..60385057, FT 60407241..60407405,60413458..60413582,60435541..60435670, FT 60453363..60453602,60485869..60485970,60490289..60490383, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-006" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244758.1" FT CDS complement(join(AL359266.14:134770..135032, FT 60348323..60348382,60348862..60348957,60384922..60385057, FT 60407241..60407405,60413458..60413582,60435541..60435670, FT 60453363..60453602,60485869..60485970,60490289..60490383, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-006" FT /standard_name="OTTHUMP00000180579" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM14265.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFEDMNLNEDKKAPLREKDFSIKKEMVMQYINTASKTGSLKRSRQI FT SPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLLLDILEKLISGK FT IQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRHPNMMTDVVKLL FT SAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVACMQLINALVTS FT PDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEEDLFELSHRLEDI FT RAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYFKLIDECVSQIV FT LHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFEKEFTDHQETQA FT ELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGV FT PPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISM FT RRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSI FT KKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQ FT EQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAV FT STACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTL FT LHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEKELETFPP FT PEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDVKKVSVEDFLTD FT LNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKRLLEMKTEGDET FT GVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHENQKVQLTEGSR FT SHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKKETELLGSFSKN FT ESVPEVEALLARLRAL" FT mRNA complement(join(AL359266.14:134770..135032, FT 60348323..60348382,60348862..60348957,60384922..60385057, FT 60407241..60407405,60413458..60413582,60435541..60435670, FT 60453363..60453602,60485869..60485970,60490289..60490383, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:195117..195293,AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-007" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244757.1" FT CDS complement(join(AL359266.14:134770..135032, FT 60348323..60348382,60348862..60348957,60384922..60385057, FT 60407241..60407405,60413458..60413582,60435541..60435670, FT 60453363..60453602,60485869..60485970,60490289..60490383, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:195117..195293,AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-007" FT /standard_name="OTTHUMP00000180580" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM14266.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFLDKFASIRIPGSKKERPPLPNLKTAFASSDCSAAPLEMMENFPK FT PLSENELLELFEKMMGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVS FT WVESFGHEGLGLLLDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEER FT SLSLLAKAVDPRHPNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIV FT EGLRHNSVQLQVACMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLD FT IQLKVFDEHKEEDLFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLL FT LIRNDYFIRQQYFKLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEE FT FEEKASELYKKFEKEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLP FT PSKEGGTGHSALPPPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQ FT NSPPLPILPFGLKPKKEFKPEISMRRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCK FT LENTFCCQQKERREEEDIEEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMM FT ILEVDETRLAESMIQNLIKHLPDQEQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPR FT LSAILFKLQFEEQVNNIKPDIMAVSTACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQ FT TFGFNLSSLCKLKDTKSADQKTTLLHFLVEICEEKYPDILNFVDDLEPLDKASKVSVET FT LEKNLRQMGRQLQQLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEK FT LYQSIIGYYAIDVKKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELA FT ERERLERQQKKKRLLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSP FT MSQRPVLKVCNHENQKVQLTEGSRSHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAE FT KKEACNVESNRKKETELLGSFSKNESVPEVEALLARLRAL" FT polyA_site complement(60435388) FT polyA_signal complement(60435406..60435411) FT mRNA complement(join(60348297..60348382,60348862..60348957, FT 60384922..60385057,60407241..60407405,60413458..60413582, FT 60435541..60435670,60453363..60453602,60485869..60485970, FT 60490289..60490383,AL390878.6:7882..7977, FT AL390878.6:53051..53165,AL390878.6:53959..54267, FT AL390878.6:57459..57563,AL390878.6:63902..63966, FT AL390878.6:66876..66994,AL390878.6:74265..74381, FT AL390878.6:75175..75293,AL390878.6:75580..75690, FT AL390878.6:91651..91756,AL390878.6:93640..93776, FT AL390878.6:96156..96316)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-008" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:BC034952.1" FT mRNA complement(join(60435388..60435670,60453363..60453602, FT 60485869..60485970,60490289..60490383, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:96156..96285)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-002" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AL137718.1" FT misc_feature 60495344 FT /note="Clone_right_end: RP11-218B22" FT misc_feature 60497345..60700821 FT /note="annotated region of clone" FT mRNA complement(join(AL354829.8:5061..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT 60498909..60499004,60544078..60544192,60544986..60545294, FT 60548486..60548590,60554929..60554993,60557903..60558021, FT 60565292..60565408,60566202..60566320,60566607..60566717, FT 60582678..60582783,60584667..60584803,60590047..60590116, FT 60590205..60590279,60616824..60616954,60667762..60667866, FT 60686144..60686320,AL356502.21:6370..6402, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-003" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AY818645.1" FT /note="match: ESTs: Em:AA780384.1 Em:AW971904.1" FT CDS complement(join(AL354829.8:5171..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT 60498909..60499004,60544078..60544192,60544986..60545294, FT 60548486..60548590,60554929..60554993,60557903..60558021, FT 60565292..60565408,60566202..60566320,60566607..60566717, FT 60582678..60582783,60584667..60584803,60590047..60590116, FT 60590205..60590279,60616824..60616954,60667762..60667866, FT 60686144..60686320,AL356502.21:6370..6402, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-003" FT /standard_name="OTTHUMP00000180577" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: proteins: Tr:Q2KPB6.1" FT /protein_id="CAM19738.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFHLNIRTLTDDMLDKFASIRIPGSKKERPPLPNLKTAFASSDCSA FT APLEMMENFPKPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYINTAS FT KTGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLL FT LDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRH FT PNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVA FT CMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEED FT LFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYF FT KLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFE FT KEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALP FT PPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLK FT PKKEFKPEISMRRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERR FT EEEDIEEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESM FT IQNLIKHLPDQEQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQ FT VNNIKPDIMAVSTACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLK FT DTKSADQKTTLLHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQ FT QLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDV FT KKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKR FT LLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHG FT NKPYL" FT mRNA complement(join(AL359266.14:133769..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,60498909..60499004, FT 60544078..60544192,60544986..60545294,60548486..60548590, FT 60554929..60554993,60557903..60558021,60565292..60565408, FT 60566202..60566320,60566607..60566717,60582678..60582783, FT 60584667..60584803,60590047..60590116,60590205..60590279, FT 60616824..60616954,60667762..60667866,60686144..60686320, FT AL356502.21:6370..6402,AL356502.21:37000..37271)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-001" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AY750055.1" FT /note="match: ESTs: Em:AA977039.1 Em:CA310418.1" FT CDS complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,60498909..60499004, FT 60544078..60544192,60544986..60545294,60548486..60548590, FT 60554929..60554993,60557903..60558021,60565292..60565408, FT 60566202..60566320,60566607..60566717,60582678..60582783, FT 60584667..60584803,60590047..60590116,60590205..60590279, FT 60616824..60616954,60667762..60667866,60686144..60686320, FT AL356502.21:6370..6402,AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-001" FT /standard_name="OTTHUMP00000018480" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAI14158.2" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFHLNIRTLTDDMLDKFASIRIPGSKKERPPLPNLKTAFASSDCSA FT APLEMMENFPKPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYINTAS FT KTGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLL FT LDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRH FT PNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVA FT CMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEED FT LFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYF FT KLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFE FT KEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALP FT PPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLK FT PKKEFKPEISMRRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERR FT EEEDIEEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESM FT IQNLIKHLPDQEQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQ FT VNNIKPDIMAVSTACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLK FT DTKSADQKTTLLHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQ FT QLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDV FT KKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKR FT LLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHE FT NQKVQLTEGSRSHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKK FT ETELLGSFSKNESVPEVEALLARLRAL" FT mRNA complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,60498909..60499004, FT 60544078..60544192,60544986..60545294,60548486..60548590, FT 60554929..60554993,60557903..60558021,60565292..60565408, FT 60566202..60566320,60566607..60566717,60582678..60582783, FT 60584667..60584803,60590047..60590116,60590205..60590279, FT 60616824..60616954,60667762..60667866,60686144..60686320, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-005" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244756.1" FT CDS complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,60498909..60499004, FT 60544078..60544192,60544986..60545294,60548486..60548590, FT 60554929..60554993,60557903..60558021,60565292..60565408, FT 60566202..60566320,60566607..60566717,60582678..60582783, FT 60584667..60584803,60590047..60590116,60590205..60590279, FT 60616824..60616954,60667762..60667866,60686144..60686320, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-005" FT /standard_name="OTTHUMP00000180578" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM19739.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFLDKFASIRIPGSKKERPPLPNLKTAFASSDCSAAPLEMMENFPK FT PLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYINTASKTGSLKRSRQI FT SPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLLLDILEKLISGK FT IQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRHPNMMTDVVKLL FT SAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVACMQLINALVTS FT PDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEEDLFELSHRLEDI FT RAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYFKLIDECVSQIV FT LHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFEKEFTDHQETQA FT ELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGV FT PPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISM FT RRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSI FT KKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQ FT EQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAV FT STACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTL FT LHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEKELETFPP FT PEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDVKKVSVEDFLTD FT LNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKRLLEMKTEGDET FT GVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHENQKVQLTEGSR FT SHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKKETELLGSFSKN FT ESVPEVEALLARLRAL" FT mRNA complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,60498909..60499004, FT 60544078..60544192,60544986..60545294,60548486..60548590, FT 60554929..60554993,60557903..60558021,60565292..60565408, FT 60566202..60566320,60566607..60566717,60582678..60582783, FT 60584667..60584803,60590047..60590116,60590205..60590279, FT 60616824..60616954,60667762..60667866, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-006" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244758.1" FT CDS complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,60498909..60499004, FT 60544078..60544192,60544986..60545294,60548486..60548590, FT 60554929..60554993,60557903..60558021,60565292..60565408, FT 60566202..60566320,60566607..60566717,60582678..60582783, FT 60584667..60584803,60590047..60590116,60590205..60590279, FT 60616824..60616954,60667762..60667866, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-006" FT /standard_name="OTTHUMP00000180579" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM19740.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFEDMNLNEDKKAPLREKDFSIKKEMVMQYINTASKTGSLKRSRQI FT SPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLLLDILEKLISGK FT IQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRHPNMMTDVVKLL FT SAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVACMQLINALVTS FT PDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEEDLFELSHRLEDI FT RAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYFKLIDECVSQIV FT LHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFEKEFTDHQETQA FT ELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGV FT PPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISM FT RRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSI FT KKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQ FT EQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAV FT STACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTL FT LHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEKELETFPP FT PEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDVKKVSVEDFLTD FT LNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKRLLEMKTEGDET FT GVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHENQKVQLTEGSR FT SHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKKETELLGSFSKN FT ESVPEVEALLARLRAL" FT mRNA complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,60498909..60499004, FT 60544078..60544192,60544986..60545294,60548486..60548590, FT 60554929..60554993,60557903..60558021,60565292..60565408, FT 60566202..60566320,60566607..60566717,60582678..60582783, FT 60584667..60584803,60590047..60590116,60590205..60590279, FT 60616824..60616954,60686144..60686320, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-007" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244757.1" FT CDS complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,60498909..60499004, FT 60544078..60544192,60544986..60545294,60548486..60548590, FT 60554929..60554993,60557903..60558021,60565292..60565408, FT 60566202..60566320,60566607..60566717,60582678..60582783, FT 60584667..60584803,60590047..60590116,60590205..60590279, FT 60616824..60616954,60686144..60686320, FT AL356502.21:37000..37179)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-007" FT /standard_name="OTTHUMP00000180580" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM19741.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFLDKFASIRIPGSKKERPPLPNLKTAFASSDCSAAPLEMMENFPK FT PLSENELLELFEKMMGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVS FT WVESFGHEGLGLLLDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEER FT SLSLLAKAVDPRHPNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIV FT EGLRHNSVQLQVACMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLD FT IQLKVFDEHKEEDLFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLL FT LIRNDYFIRQQYFKLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEE FT FEEKASELYKKFEKEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLP FT PSKEGGTGHSALPPPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQ FT NSPPLPILPFGLKPKKEFKPEISMRRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCK FT LENTFCCQQKERREEEDIEEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMM FT ILEVDETRLAESMIQNLIKHLPDQEQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPR FT LSAILFKLQFEEQVNNIKPDIMAVSTACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQ FT TFGFNLSSLCKLKDTKSADQKTTLLHFLVEICEEKYPDILNFVDDLEPLDKASKVSVET FT LEKNLRQMGRQLQQLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEK FT LYQSIIGYYAIDVKKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELA FT ERERLERQQKKKRLLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSP FT MSQRPVLKVCNHENQKVQLTEGSRSHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAE FT KKEACNVESNRKKETELLGSFSKNESVPEVEALLARLRAL" FT mRNA join(60586885..60586992,60595055..60595142, FT 60616815..60616923,60618330..60618491) FT /locus_tag="RP11-442F12.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI018026.1" FT mRNA complement(join(AL354829.8:5165..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT 60498909..60499004,60544078..60544192,60544986..60545294, FT 60548486..60548590,60554929..60554993,60557903..60558021, FT 60565292..60565408,60566202..60566320,60566607..60566717, FT 60582678..60582783,60584667..60584803,60587183..60587343)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-008" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:BC034952.1" FT mRNA complement(join(AL354829.8:92256..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,60498909..60499004, FT 60544078..60544192,60544986..60545294,60548486..60548590, FT 60554929..60554993,60557903..60558021,60565292..60565408, FT 60566202..60566320,60566607..60566717,60582678..60582783, FT 60584667..60584803,60587183..60587312)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-002" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AL137718.1" FT mRNA join(60587437..60587505,60595055..60595142, FT 60616815..60616923,60618330..60618491) FT /locus_tag="RP11-442F12.2-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AW468687.1 Em:BI458826.1" FT mRNA join(60587440..60587505,60616815..60616923, FT 60618330..60618491) FT /locus_tag="RP11-442F12.2-003" FT /product="novel transcript" FT /note="match: ESTs: Em:AI685327.1" FT misc_feature 60668447 FT /note="Clone_left_end: RP11-430I3" FT misc_feature 60694504 FT /note="Clone_right_end: RP11-442F12" FT misc_feature 60700822..60764162 FT /note="annotated region of clone" FT mRNA join(60718832..60718997,60721389..60721479, FT 60727530..60727639) FT /locus_tag="RP11-430I3.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA382138 Em:AA431127" FT mRNA complement(join(AL354829.8:5061..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL390878.6:195117..195293, FT 60707091..60707123,60737721..60737900)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-003" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AY818645.1" FT /note="match: ESTs: Em:AA780384.1 Em:AW971904.1" FT CDS complement(join(AL354829.8:5171..5250, FT AL354829.8:5730..5825,AL354829.8:41790..41925, FT AL354829.8:64109..64273,AL354829.8:70326..70450, FT AL354829.8:92409..92538,AL354829.8:110231..110470, FT AL354829.8:142737..142838,AL354829.8:147157..147251, FT AL390878.6:7882..7977,AL390878.6:53051..53165, FT AL390878.6:53959..54267,AL390878.6:57459..57563, FT AL390878.6:63902..63966,AL390878.6:66876..66994, FT AL390878.6:74265..74381,AL390878.6:75175..75293, FT AL390878.6:75580..75690,AL390878.6:91651..91756, FT AL390878.6:93640..93776,AL390878.6:99020..99089, FT AL390878.6:99178..99252,AL390878.6:125797..125927, FT AL390878.6:176735..176839,AL390878.6:195117..195293, FT 60707091..60707123,60737721..60737900)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-003" FT /standard_name="OTTHUMP00000180577" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: proteins: Tr:Q2KPB6.1" FT /protein_id="CAM19398.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFHLNIRTLTDDMLDKFASIRIPGSKKERPPLPNLKTAFASSDCSA FT APLEMMENFPKPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYINTAS FT KTGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLL FT LDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRH FT PNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVA FT CMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEED FT LFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYF FT KLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFE FT KEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALP FT PPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLK FT PKKEFKPEISMRRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERR FT EEEDIEEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESM FT IQNLIKHLPDQEQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQ FT VNNIKPDIMAVSTACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLK FT DTKSADQKTTLLHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQ FT QLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDV FT KKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKR FT LLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHG FT NKPYL" FT mRNA complement(join(AL359266.14:133769..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,AL390878.6:7882..7977, FT AL390878.6:53051..53165,AL390878.6:53959..54267, FT AL390878.6:57459..57563,AL390878.6:63902..63966, FT AL390878.6:66876..66994,AL390878.6:74265..74381, FT AL390878.6:75175..75293,AL390878.6:75580..75690, FT AL390878.6:91651..91756,AL390878.6:93640..93776, FT AL390878.6:99020..99089,AL390878.6:99178..99252, FT AL390878.6:125797..125927,AL390878.6:176735..176839, FT AL390878.6:195117..195293,60707091..60707123, FT 60737721..60737992)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-001" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AY750055.1" FT /note="match: ESTs: Em:AA977039.1 Em:CA310418.1" FT CDS complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,AL390878.6:7882..7977, FT AL390878.6:53051..53165,AL390878.6:53959..54267, FT AL390878.6:57459..57563,AL390878.6:63902..63966, FT AL390878.6:66876..66994,AL390878.6:74265..74381, FT AL390878.6:75175..75293,AL390878.6:75580..75690, FT AL390878.6:91651..91756,AL390878.6:93640..93776, FT AL390878.6:99020..99089,AL390878.6:99178..99252, FT AL390878.6:125797..125927,AL390878.6:176735..176839, FT AL390878.6:195117..195293,60707091..60707123, FT 60737721..60737900)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-001" FT /standard_name="OTTHUMP00000018480" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAI14102.2" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFHLNIRTLTDDMLDKFASIRIPGSKKERPPLPNLKTAFASSDCSA FT APLEMMENFPKPLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYINTAS FT KTGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLL FT LDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRH FT PNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVA FT CMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEED FT LFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYF FT KLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFE FT KEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALP FT PPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLK FT PKKEFKPEISMRRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERR FT EEEDIEEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESM FT IQNLIKHLPDQEQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQ FT VNNIKPDIMAVSTACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLK FT DTKSADQKTTLLHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQ FT QLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDV FT KKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKR FT LLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHE FT NQKVQLTEGSRSHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKK FT ETELLGSFSKNESVPEVEALLARLRAL" FT mRNA complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,AL390878.6:7882..7977, FT AL390878.6:53051..53165,AL390878.6:53959..54267, FT AL390878.6:57459..57563,AL390878.6:63902..63966, FT AL390878.6:66876..66994,AL390878.6:74265..74381, FT AL390878.6:75175..75293,AL390878.6:75580..75690, FT AL390878.6:91651..91756,AL390878.6:93640..93776, FT AL390878.6:99020..99089,AL390878.6:99178..99252, FT AL390878.6:125797..125927,AL390878.6:176735..176839, FT AL390878.6:195117..195293,60737721..60737900)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-005" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244756.1" FT CDS complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,AL390878.6:7882..7977, FT AL390878.6:53051..53165,AL390878.6:53959..54267, FT AL390878.6:57459..57563,AL390878.6:63902..63966, FT AL390878.6:66876..66994,AL390878.6:74265..74381, FT AL390878.6:75175..75293,AL390878.6:75580..75690, FT AL390878.6:91651..91756,AL390878.6:93640..93776, FT AL390878.6:99020..99089,AL390878.6:99178..99252, FT AL390878.6:125797..125927,AL390878.6:176735..176839, FT AL390878.6:195117..195293,60737721..60737900)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-005" FT /standard_name="OTTHUMP00000180578" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM19399.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFLDKFASIRIPGSKKERPPLPNLKTAFASSDCSAAPLEMMENFPK FT PLSENELLELFEKMMEDMNLNEDKKAPLREKDFSIKKEMVMQYINTASKTGSLKRSRQI FT SPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLLLDILEKLISGK FT IQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRHPNMMTDVVKLL FT SAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVACMQLINALVTS FT PDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEEDLFELSHRLEDI FT RAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYFKLIDECVSQIV FT LHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFEKEFTDHQETQA FT ELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGV FT PPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISM FT RRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSI FT KKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQ FT EQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAV FT STACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTL FT LHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEKELETFPP FT PEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDVKKVSVEDFLTD FT LNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKRLLEMKTEGDET FT GVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHENQKVQLTEGSR FT SHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKKETELLGSFSKN FT ESVPEVEALLARLRAL" FT mRNA complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,AL390878.6:7882..7977, FT AL390878.6:53051..53165,AL390878.6:53959..54267, FT AL390878.6:57459..57563,AL390878.6:63902..63966, FT AL390878.6:66876..66994,AL390878.6:74265..74381, FT AL390878.6:75175..75293,AL390878.6:75580..75690, FT AL390878.6:91651..91756,AL390878.6:93640..93776, FT AL390878.6:99020..99089,AL390878.6:99178..99252, FT AL390878.6:125797..125927,AL390878.6:176735..176839, FT 60737721..60737900)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-006" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244758.1" FT CDS complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,AL390878.6:7882..7977, FT AL390878.6:53051..53165,AL390878.6:53959..54267, FT AL390878.6:57459..57563,AL390878.6:63902..63966, FT AL390878.6:66876..66994,AL390878.6:74265..74381, FT AL390878.6:75175..75293,AL390878.6:75580..75690, FT AL390878.6:91651..91756,AL390878.6:93640..93776, FT AL390878.6:99020..99089,AL390878.6:99178..99252, FT AL390878.6:125797..125927,AL390878.6:176735..176839, FT 60737721..60737900)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-006" FT /standard_name="OTTHUMP00000180579" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM19400.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFEDMNLNEDKKAPLREKDFSIKKEMVMQYINTASKTGSLKRSRQI FT SPQEFIHELKMGSADERLVTCLESLRVSLTSNPVSWVESFGHEGLGLLLDILEKLISGK FT IQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEERSLSLLAKAVDPRHPNMMTDVVKLL FT SAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIVEGLRHNSVQLQVACMQLINALVTS FT PDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLDIQLKVFDEHKEEDLFELSHRLEDI FT RAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIRNDYFIRQQYFKLIDECVSQIV FT LHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEEFEEKASELYKKFEKEFTDHQETQA FT ELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSGGGV FT PPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQNSPPLPILPFGLKPKKEFKPEISM FT RRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCKLENTFCCQQKERREEEDIEEKKSI FT KKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMMILEVDETRLAESMIQNLIKHLPDQ FT EQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPRLSAILFKLQFEEQVNNIKPDIMAV FT STACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQTFGFNLSSLCKLKDTKSADQKTTL FT LHFLVEICEEKYPDILNFVDDLEPLDKASKVSVETLEKNLRQMGRQLQQLEKELETFPP FT PEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYYAIDVKKVSVEDFLTD FT LNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQKKKRLLEMKTEGDET FT GVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSPMSQRPVLKVCNHENQKVQLTEGSR FT SHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAEKKEACNVESNRKKETELLGSFSKN FT ESVPEVEALLARLRAL" FT mRNA complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,AL390878.6:7882..7977, FT AL390878.6:53051..53165,AL390878.6:53959..54267, FT AL390878.6:57459..57563,AL390878.6:63902..63966, FT AL390878.6:66876..66994,AL390878.6:74265..74381, FT AL390878.6:75175..75293,AL390878.6:75580..75690, FT AL390878.6:91651..91756,AL390878.6:93640..93776, FT AL390878.6:99020..99089,AL390878.6:99178..99252, FT AL390878.6:125797..125927,AL390878.6:195117..195293, FT 60737721..60737900)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-007" FT /product="diaphanous homolog 3 (Drosophila)" FT /note="match: cDNAs: Em:AB244757.1" FT CDS complement(join(AL359266.14:134770..135032, FT AL354829.8:5191..5250,AL354829.8:5730..5825, FT AL354829.8:41790..41925,AL354829.8:64109..64273, FT AL354829.8:70326..70450,AL354829.8:92409..92538, FT AL354829.8:110231..110470,AL354829.8:142737..142838, FT AL354829.8:147157..147251,AL390878.6:7882..7977, FT AL390878.6:53051..53165,AL390878.6:53959..54267, FT AL390878.6:57459..57563,AL390878.6:63902..63966, FT AL390878.6:66876..66994,AL390878.6:74265..74381, FT AL390878.6:75175..75293,AL390878.6:75580..75690, FT AL390878.6:91651..91756,AL390878.6:93640..93776, FT AL390878.6:99020..99089,AL390878.6:99178..99252, FT AL390878.6:125797..125927,AL390878.6:195117..195293, FT 60737721..60737900)) FT /gene="DIAPH3" FT /locus_tag="RP11-26P21.1-007" FT /standard_name="OTTHUMP00000180580" FT /product="diaphanous homolog 3 (Drosophila)" FT /protein_id="CAM19401.1" FT /translation="MERHQPRLHHPAQGSAAGTPYPSSASLRGCRESKMPRRKGPQHPP FT PPSGPEEPGEKRPKFLDKFASIRIPGSKKERPPLPNLKTAFASSDCSAAPLEMMENFPK FT PLSENELLELFEKMMGSLKRSRQISPQEFIHELKMGSADERLVTCLESLRVSLTSNPVS FT WVESFGHEGLGLLLDILEKLISGKIQEKVVKKNQHKVIQCLKALMNTQYGLERIMSEER FT SLSLLAKAVDPRHPNMMTDVVKLLSAVCIVGEESILEEVLEALTSAGEEKKIDRFFCIV FT EGLRHNSVQLQVACMQLINALVTSPDDLDFRLHIRNEFMRCGLKEILPNLKCIKNDGLD FT IQLKVFDEHKEEDLFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLL FT LIRNDYFIRQQYFKLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLEE FT FEEKASELYKKFEKEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLP FT PSKEGGTGHSALPPPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFLGGQ FT NSPPLPILPFGLKPKKEFKPEISMRRLNWLKIRPHEMTENCFWIKVNENKYENVDLLCK FT LENTFCCQQKERREEEDIEEKKSIKKKIKELKFLDSKIAQNLSIFLSSFRVPYEEIRMM FT ILEVDETRLAESMIQNLIKHLPDQEQLNSLSQFKSEYSNLCEPEQFVVVMSNVKRLRPR FT LSAILFKLQFEEQVNNIKPDIMAVSTACEEIKKSKSFSKLLELVLLMGNYMNAGSRNAQ FT TFGFNLSSLCKLKDTKSADQKTTLLHFLVEICEEKYPDILNFVDDLEPLDKASKVSVET FT LEKNLRQMGRQLQQLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEK FT LYQSIIGYYAIDVKKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELA FT ERERLERQQKKKRLLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMPKDVRQSLSP FT MSQRPVLKVCNHENQKVQLTEGSRSHYNINCNSTRTPVAKELNYNLDTHTSTGRIKAAE FT KKEACNVESNRKKETELLGSFSKNESVPEVEALLARLRAL" FT misc_feature 60763963 FT /note="Clone_left_end: RP11-359P14" FT misc_feature 60764163..60990922 FT /note="annotated region of clone" FT mRNA complement(join(60788486..60788835,60789012..60789080)) FT /locus_tag="RP11-359P14.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG182233 Em:BG183139 Em:BG221120" FT misc_feature 60793992..60794005 FT /note="Weak data" FT misc_feature 60829347 FT /note="Tandem repeat. Forced join. Assembly confirmed by FT restriction digest data" FT misc_feature 60829348..60829385 FT /note="Sequence from overlapping clone RP11-430I3 FT (AL356502). Assembly confirmed by restriction digest" FT misc_feature 60835910..60835913 FT /note="Sequence from overlapping clone RP11-430I3 FT (AL356502). Assembly confirmed by restriction digest" FT misc_feature 60848269 FT /note="Clone_right_end: RP11-430I3" FT CDS 60848910..>60850140 FT /pseudo FT /locus_tag="RP11-359P14.2-001" FT /product="TAR DNA binding protein (TARDBP) pseudogene" FT /note="match: proteins: Sw:Q13148 Sw:Q921F2 Tr:Q20414" FT misc_feature 60873099..60873103 FT /note="1327 bases of IS2 transposon (V00610) removed here. FT This sequence represents the duplicated flanking sequence FT of the IS2" FT misc_feature 60873104..60873124 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 60922298 FT /note="Clone_left_end: RP11-307D9" FT mRNA join(60971073..60971144,AL354764.14:24898..24984, FT AL354764.14:45592..45752,AL512666.6:7098..7239, FT AL512666.6:23635..23706,AL512666.6:24553..24617, FT AL512666.6:25659..25808,AL512666.6:34295..34435, FT AL512666.6:49402..49779,AL512666.6:50490..50615, FT AL512666.6:68227..68697) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-002" FT /product="tudor domain containing 3" FT /note="match: cDNAs: Em:BC020604 Em:BC020604.1" FT /note="match: ESTs: Em:BG620782" FT mRNA join(60971079..60971144,AL354764.14:24898..24984, FT AL354764.14:29895..29960,AL354764.14:45592..45752, FT AL512666.6:7098..7239,AL512666.6:23635..23706, FT AL512666.6:25659..25808,AL512666.6:34295..34435, FT AL512666.6:49623..49779,AL512666.6:50490..50615, FT AL512666.6:68227..69077,AL512666.6:74968..75093, FT AL512666.6:107385..107510,AL512666.6:113476..113732) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-003" FT /product="tudor domain containing 3" FT /note="match: cDNAs: Em:BC005670" FT mRNA join(60971122..60971144,AL354764.14:24900..24984, FT AL354764.14:29899..29960,AL354764.14:45592..45752, FT AL512666.6:7098..7239,AL512666.6:23635..23706, FT AL512666.6:25659..25808,AL512666.6:34295..34435, FT AL512666.6:49623..49779,AL512666.6:50490..50615, FT AL512666.6:68227..69077,AL512666.6:74968..75093, FT AL512666.6:107385..107510,AL512666.6:113476..113737) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-001" FT /product="tudor domain containing 3" FT /note="match: cDNAs: Em:AK024660.1" FT /note="match: ESTs: Em:AI091156.1 Em:AI342429.1 FT Em:AI741400.1" FT misc_feature 60971366..60971653 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT misc_feature 60990822 FT /note="Clone_right_end: RP11-359P14" FT misc_feature 60990923..61036274 FT /note="annotated region of clone" FT mRNA join(61008183..61008219,61013822..61013906, FT 61018821..61018882,61034514..61034674, FT AL512666.6:7098..7239,AL512666.6:23635..23706, FT AL512666.6:25659..>25759) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-005" FT /product="tudor domain containing 3" FT /note="match: ESTs: Em:BG721821" FT mRNA join(61018821..61018882,61034514..61035134) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-004" FT /product="tudor domain containing 3" FT /note="match: ESTs: Em:BG029629" FT misc_feature 61032275 FT /note="Clone_left_end: RP11-459E2" FT CDS join(61034601..61034674,AL512666.6:7098..7239, FT AL512666.6:23635..23706,AL512666.6:25659..>25759) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-005" FT /standard_name="OTTHUMP00000018486" FT /product="tudor domain containing 3" FT /protein_id="CAH72280.1" FT /translation="MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKNG FT FLLLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQKCVSHVQV FT DSRELDRRKTLQVTMPVKPTNDNDE" FT CDS join(61034601..61034674,AL512666.6:7098..7239, FT AL512666.6:23635..23706,AL512666.6:25659..25808, FT AL512666.6:34295..34435,AL512666.6:49623..49779, FT AL512666.6:50490..50615,AL512666.6:68227..69077, FT AL512666.6:74968..75093,AL512666.6:107385..107501) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-001" FT /standard_name="OTTHUMP00000018483" FT /product="tudor domain containing 3" FT /note="match: proteins: Sw:Q9H7E2.1 Tr:Q5VUZ2.1 FT Tr:Q66HC1.1" FT /protein_id="CAH72281.1" FT /translation="MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKNG FT FLLLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQKCVSHVQV FT DSRELDRRKTLQVTMPVKPTNDNDEFEKQRTAAIAEVAKSKETKTFGGGGGGARSNLNM FT NAAGNRNREVLQKEKSTKSEGKHEGVYRELVDEKALKHITEMGFSKEASRQALMDNGNN FT LEAALNVLLTSNKQKPVMGPPLRGRGKGRGRIRSEDEEDLGNARPSAPSTLFDFLESKM FT GTLNVEEPKSQPQQLHQGQYRSSNTEQNGVKDNNHLRHPPRNDTRQPRNEKPPRFQRDS FT QNSKSVLEGSGLPRNRGSERPSTSSVSEVWAEDRIKCDRPYSRYDRTKDTSYPLGSQHS FT DGAFKKRDNSMQSRSGKGPSFAEAKENPLPQGSVDYNNQKRGKRESQTSIPDYFYDRKS FT QTINNEAFSGIKIEKHFNVNTDYQNPVRSNSFIGVPNGEVEMPLKGRRIGPIKPAGPVT FT AVPCDDKIFYNSGPKRRSGPIKPEKILESSIPMEYAKMWKPGDECFALYWEDNKFYRAE FT VEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQTEAWEEEGTYDQTLEFRRGGDGQPRR FT STRPTQQFYQPPRARN" FT mRNA join(AL359920.15:207011..207082,61013820..61013906, FT 61034514..61034674,AL512666.6:7098..7239, FT AL512666.6:23635..23706,AL512666.6:24553..24617, FT AL512666.6:25659..25808,AL512666.6:34295..34435, FT AL512666.6:49402..49779,AL512666.6:50490..50615, FT AL512666.6:68227..68697) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-002" FT /product="tudor domain containing 3" FT /note="match: cDNAs: Em:BC020604 Em:BC020604.1" FT /note="match: ESTs: Em:BG620782" FT mRNA join(AL359920.15:207017..207082,61013820..61013906, FT 61018817..61018882,61034514..61034674, FT AL512666.6:7098..7239,AL512666.6:23635..23706, FT AL512666.6:25659..25808,AL512666.6:34295..34435, FT AL512666.6:49623..49779,AL512666.6:50490..50615, FT AL512666.6:68227..69077,AL512666.6:74968..75093, FT AL512666.6:107385..107510,AL512666.6:113476..113732) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-003" FT /product="tudor domain containing 3" FT /note="match: cDNAs: Em:BC005670" FT mRNA join(AL359920.15:207060..207082,61013822..61013906, FT 61018821..61018882,61034514..61034674, FT AL512666.6:7098..7239,AL512666.6:23635..23706, FT AL512666.6:25659..25808,AL512666.6:34295..34435, FT AL512666.6:49623..49779,AL512666.6:50490..50615, FT AL512666.6:68227..69077,AL512666.6:74968..75093, FT AL512666.6:107385..107510,AL512666.6:113476..113737) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-001" FT /product="tudor domain containing 3" FT /note="match: cDNAs: Em:AK024660.1" FT /note="match: ESTs: Em:AI091156.1 Em:AI342429.1 FT Em:AI741400.1" FT misc_feature 61036275..61169729 FT /note="annotated region of clone" FT mRNA join(AL354764.14:19261..19297,AL354764.14:24900..24984, FT AL354764.14:29899..29960,AL354764.14:45592..45752, FT 61041372..61041513,61057909..61057980,61059933..>61060033) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-005" FT /product="tudor domain containing 3" FT /note="match: ESTs: Em:BG721821" FT CDS join(AL354764.14:45679..45752,61041372..61041513, FT 61057909..61057980,61059933..>61060033) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-005" FT /standard_name="OTTHUMP00000018486" FT /product="tudor domain containing 3" FT /protein_id="CAH73999.1" FT /translation="MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKNG FT FLLLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQKCVSHVQV FT DSRELDRRKTLQVTMPVKPTNDNDE" FT CDS join(AL354764.14:45679..45752,61041372..61041513, FT 61057909..61057980,61059933..61060082,61068569..61068709, FT 61083897..61084053,61084764..61084889,61102501..61103351, FT 61109242..61109367,61141659..61141775) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-001" FT /standard_name="OTTHUMP00000018483" FT /product="tudor domain containing 3" FT /note="match: proteins: Sw:Q9H7E2.1 Tr:Q5VUZ2.1 FT Tr:Q66HC1.1" FT /protein_id="CAH74000.1" FT /translation="MLRLQMTDGHISCTAVEFSYMSKISLNTPPGTKVKLSGIVDIKNG FT FLLLNDSNTTVLGGEVEHLIEKWELQRSLSKHNRSNIGTEGGPPPFVPFGQKCVSHVQV FT DSRELDRRKTLQVTMPVKPTNDNDEFEKQRTAAIAEVAKSKETKTFGGGGGGARSNLNM FT NAAGNRNREVLQKEKSTKSEGKHEGVYRELVDEKALKHITEMGFSKEASRQALMDNGNN FT LEAALNVLLTSNKQKPVMGPPLRGRGKGRGRIRSEDEEDLGNARPSAPSTLFDFLESKM FT GTLNVEEPKSQPQQLHQGQYRSSNTEQNGVKDNNHLRHPPRNDTRQPRNEKPPRFQRDS FT QNSKSVLEGSGLPRNRGSERPSTSSVSEVWAEDRIKCDRPYSRYDRTKDTSYPLGSQHS FT DGAFKKRDNSMQSRSGKGPSFAEAKENPLPQGSVDYNNQKRGKRESQTSIPDYFYDRKS FT QTINNEAFSGIKIEKHFNVNTDYQNPVRSNSFIGVPNGEVEMPLKGRRIGPIKPAGPVT FT AVPCDDKIFYNSGPKRRSGPIKPEKILESSIPMEYAKMWKPGDECFALYWEDNKFYRAE FT VEALHSSGMTAVVKFIDYGNYEEVLLSNIKPIQTEAWEEEGTYDQTLEFRRGGDGQPRR FT STRPTQQFYQPPRARN" FT mRNA join(61103097..61103351,61109242..>61109560) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-006" FT /product="tudor domain containing 3" FT /note="match: ESTs: Em:BQ003259" FT polyA_signal 61147985..61147990 FT polyA_site 61148010 FT misc_feature 61167630 FT /note="Clone_left_end: RP11-521H3" FT mRNA join(AL359920.15:207011..207082,AL354764.14:24898..24984, FT AL354764.14:45592..45752,61041372..61041513, FT 61057909..61057980,61058827..61058891,61059933..61060082, FT 61068569..61068709,61083676..61084053,61084764..61084889, FT 61102501..61102971) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-002" FT /product="tudor domain containing 3" FT /note="match: cDNAs: Em:BC020604 Em:BC020604.1" FT /note="match: ESTs: Em:BG620782" FT mRNA join(AL359920.15:207017..207082,AL354764.14:24898..24984, FT AL354764.14:29895..29960,AL354764.14:45592..45752, FT 61041372..61041513,61057909..61057980,61059933..61060082, FT 61068569..61068709,61083897..61084053,61084764..61084889, FT 61102501..61103351,61109242..61109367,61141659..61141784, FT 61147750..61148006) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-003" FT /product="tudor domain containing 3" FT /note="match: cDNAs: Em:BC005670" FT mRNA join(AL359920.15:207060..207082,AL354764.14:24900..24984, FT AL354764.14:29899..29960,AL354764.14:45592..45752, FT 61041372..61041513,61057909..61057980,61059933..61060082, FT 61068569..61068709,61083897..61084053,61084764..61084889, FT 61102501..61103351,61109242..61109367,61141659..61141784, FT 61147750..61148011) FT /gene="TDRD3" FT /locus_tag="RP11-459E2.1-001" FT /product="tudor domain containing 3" FT /note="match: cDNAs: Em:AK024660.1" FT /note="match: ESTs: Em:AI091156.1 Em:AI342429.1 FT Em:AI741400.1" FT misc_feature complement(61169730..61319683) FT /note="annotated region of clone" FT mRNA join(61259333..61259486,61264907..61264998, FT 61268585..61268662) FT /locus_tag="RP11-521H3.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI024366" FT mRNA join(61259333..61259486,61264907..61264998, FT 61268046..61268202) FT /locus_tag="RP11-521H3.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AI024366" FT CDS complement(61211022..61212231) FT /pseudo FT /locus_tag="RP11-521H3.2-001" FT /product="eukaryotic translation initiation factor 4A, FT variant 1 (EIF4A1) pseudogene" FT /note="match: proteins: Sw:P10630 Sw:P29562 Sw:P60842 FT Sw:P60843 Sw:Q14240 Sw:Q14240 Sw:Q14240 Tr:O42576 FT Tr:O42577" FT polyA_signal complement(61210898..61210903) FT misc_feature complement(61169730) FT /note="Clone_left_end: RP11-521H3" FT misc_feature 61382298..61382503 FT /note="Sequence from overlapping clone RP11-288O16 FT (AL354717). Assembly confirmed by restriction digest" FT misc_feature 61414445 FT /note="Clone_left_end: RP11-196P2" FT misc_feature 61418445..61576589 FT /note="annotated region of clone" FT mRNA join(61491176..61491372,61491934..61492139) FT /locus_tag="RP11-196P2.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA393276" FT misc_feature 61540974 FT /note="Clone_left_end: RP11-307O11" FT misc_feature 61567221..61567258 FT /note="Single clone region. Assembly confirmed by FT restriction digest data. Single read sequenced with dGTP FT big dye terminator chemistry" FT misc_feature 61574589 FT /note="Clone_right_end: RP11-196P2" FT misc_feature 61669540..61669583 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 61707477..61707553 FT /note="Sequence from clone PCR only" FT misc_feature 61722516 FT /note="Clone_right_end: RP11-307O11" FT misc_feature 61779189..61779487 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm the assembly" FT misc_feature 61798916..61798944 FT /note="Single clone region. Single primer read only. FT Assembly confirmed by restriction digest data" FT misc_feature 61819181 FT /note="Clone_left_end: RP11-310K10" FT misc_feature 61823181..61984411 FT /note="annotated region of clone" FT mRNA complement(join(61983991..61984411,AL592490.8:2001..5688, FT AL592490.8:6749..7244)) FT /gene="PCDH20" FT /locus_tag="RP11-432J3.3-001" FT /product="protocadherin 20" FT /note="match: cDNAs: Em:AF169693.1 Em:AK289924.1 FT Em:BC027907.1" FT /note="match: ESTs: Em:AA040057.1 Em:BU608937.1 FT Em:DA291540.1 Em:DA329518.1 Em:DA340275.1" FT misc_feature 61828699..61828732 FT /note="Sequence from overlapping clone RP11-350G11 FT (AL627427). Assembly confirmed by restriction digest" FT misc_feature 61836333 FT /note="Clone_right_end: RP11-350G11" FT mRNA complement(join(61983991..61984411,AL592490.8:2001..5688, FT AL592490.8:6749..7216,AL592490.8:7490..7606, FT AL592490.8:17642..18937,AL592490.8:19215..19571)) FT /gene="PCDH20" FT /locus_tag="RP11-432J3.3-002" FT /product="protocadherin 20" FT /note="match: cDNAs: Em:AL833830.1" FT misc_feature 61870186 FT /note="Clone_left_end: RP11-432J3" FT misc_feature 61982411 FT /note="Clone_right_end: RP11-310K10" FT polyA_site complement(61983818) FT polyA_signal complement(61983837..61983842) FT polyA_site complement(61983991) FT polyA_signal complement(61984008..61984013) FT misc_feature 61984412..62041683 FT /note="annotated region of clone" FT mRNA complement(join(61985150..61987910,61988052..61988099, FT 61989160..61989293)) FT /gene="PCDH20" FT /locus_tag="RP11-432J3.3-003" FT /product="protocadherin 20" FT /note="match: cDNAs: Em:AK094680.1" FT CDS complement(join(61985376..61988099,61989160..61989291)) FT /gene="PCDH20" FT /locus_tag="RP11-432J3.3-001" FT /standard_name="OTTHUMP00000018487" FT /product="protocadherin 20" FT /note="match: proteins: Sw:Q8N6Y1.1" FT /protein_id="CAH73802.3" FT /translation="MRGRGNARSSQALGVSWCPATWHPRLDMGRLHRPRSSTSYRNLPH FT LFLFFLFVGPFSCLGSYSRATELLYSLNEGLPAGVLIGSLAEDLRLLPRSAGRPDPQSQ FT LPERTGAEWNPPLSFSLASRGLSGQYVTLDNRSGELHTSAQEIDREALCVEGGGGTAWS FT GSVSISSSPSDSCLLLLDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENA FT PVNTRLAIEHPAVDPDVGINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDRE FT TQDQYVSIIIAEDGGSPPLLGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIA FT AVQAVDKDLGTNAQITYSYSQKVPQASKDLFHLDENTGVIKLFSKIGGSVLESHKLTIL FT ANGPGCIPAVITALVSIIKVIFRPPEIVPRYIANEIDGVVYLKELEPVNTPIAFFTIRD FT PEGKYKVNCYLDGEGPFRLSPYKPYNNEYLLETTKPMDYELQQFYEVAVVAWNSEGFHV FT KRVIKVQLLDDNDNAPIFLQPLIELTIEENNSPNAFLTKLYATDADSEERGQVSYFLGP FT DAPSYFSLDSVTGILTVSTQLDREEKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDN FT SPRFINKDFSFFVPENFPGYGEIGVISVTDADAGRNGWVALSVVNQSDIFVIDTGKGML FT RAKVSLDREQQSSYTLWVEAVDGGEPALSSTAKITILLLDINDNPPLVLFPQSNMSYLL FT VLPSTLPGSPVTEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEEALLQ FT TDYGLHRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPEINIEEKEPQ FT ISIEPTHRKVESVSCMPTLVALSVISLGSITLVTGMGIYICLRKGEKHPREDENLEVQI FT PLKGKIDLHMRERKPMDISNI" FT mRNA complement(join(AL162575.15:162811..163231, FT 61984412..61988099,61989160..61989655)) FT /gene="PCDH20" FT /locus_tag="RP11-432J3.3-001" FT /product="protocadherin 20" FT /note="match: cDNAs: Em:AF169693.1 Em:AK289924.1 FT Em:BC027907.1" FT /note="match: ESTs: Em:AA040057.1 Em:BU608937.1 FT Em:DA291540.1 Em:DA329518.1 Em:DA340275.1" FT mRNA complement(join(61998853..61999119,62001626..62002220)) FT /gene="PCDH20" FT /locus_tag="RP11-432J3.3-004" FT /product="protocadherin 20" FT /note="match: ESTs: Em:BI462451 Em:H41066" FT mRNA complement(join(AL162575.15:162811..163231, FT 61984412..61988099,61989160..61989627,61989901..61990017, FT 62000053..62001348,62001626..62001982)) FT /gene="PCDH20" FT /locus_tag="RP11-432J3.3-002" FT /product="protocadherin 20" FT /note="match: cDNAs: Em:AL833830.1" FT misc_feature 62004754..62004898 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 62009275..62009280 FT /note="1327 bases of IS2 transposon (V00610) removed here. FT This sequence represents the duplicated flanking sequence FT of the IS2" FT misc_feature 62037684 FT /note="Clone_left_end: RP11-210L5" FT misc_feature 62116395 FT /note="Clone_left_end: RP11-543A19" FT misc_feature 62213768 FT /note="Clone_right_end: RP11-210L5" FT misc_feature 62278152 FT /note="Clone_right_end: RP11-543A19" FT misc_feature 62361711 FT /note="Clone_left_end: RP11-429G17" FT misc_feature 62365711..62528541 FT /note="annotated region of clone" FT CDS 62379283..62379809 FT /pseudo FT /locus_tag="RP11-429G17.1-001" FT /product="ras-related C3 botulinum toxin substrate 1 (rho FT family, small GTP binding protein Rac1) (RAC1) pseudogene" FT /note="match: proteins: Sw:P34149 Sw:P40792 Sw:P63001 FT Sw:P63001 Tr:Q6LC82 Tr:Q966X0 Tr:Q9D859 Tr:Q9PW31" FT misc_feature 62526541 FT /note="Clone_right_end: RP11-429G17" FT misc_feature 62530536..62632263 FT /note="annotated region of clone" FT misc_feature 62533896..62534468 FT /note="Sequence from overlapping clone RP11-104B16 FT (AL596253). Assembly confirmed by restriction digest" FT misc_feature 62591730..62591865 FT /note="Sequence from overlapping clone RP11-104B16 FT (AL596253). Assembly confirmed by restriction digest" FT mRNA complement(join(62578226..62578643,62603392..62603681)) FT /locus_tag="RP11-71L7.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI464936" FT misc_feature 62607826 FT /note="Clone_right_end: RP11-104B16" FT misc_feature 62615319 FT /note="Clone_left_end: RP11-539I23" FT misc_feature 62630263 FT /note="Clone_right_end: RP11-71L7" FT misc_feature 62632264..62811543 FT /note="annotated region of clone" FT misc_feature 62679165..62679168 FT /note="1199 bases of IS5 transposon (J01735) removed here. FT This sequence represents the duplicated flanking sequence FT of the IS5" FT mRNA join(62798230..62798327,62801767..62801865, FT AL160151.16:12517..12637) FT /locus_tag="RP11-168G22.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI028357 Em:AI028357.1" FT misc_feature 62811324 FT /note="Clone_left_end: RP11-168G22" FT misc_feature 62811443 FT /note="Clone_right_end: RP11-539I23" FT misc_feature 62811544..62965973 FT /note="annotated region of clone" FT mRNA join(62895438..62895519,62896059..62896531) FT /locus_tag="RP11-168G22.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF057195" FT polyA_signal 62896508..62896513 FT mRNA join(62897790..62898087,62902889..62902966) FT /locus_tag="RP11-168G22.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:F01958 Em:R46019 Em:T24087 FT Em:Z39313" FT CDS 62902121..62902517 FT /pseudo FT /locus_tag="RP11-168G22.4-001" FT /product="ribosomal protein L32 (RPL32) pseudogene" FT /note="match: proteins: Sw:P17932 Sw:P62910 Sw:P62910 FT Sw:P62911 Sw:P62911 Sw:P62911 Sw:P62912 Sw:Q6QAT0 Sw:Q90YT6 FT Sw:Q94460 Sw:Q962T1 Tr:Q22716 Tr:Q8UVG1 Tr:Q93WA5 FT Tr:Q9TTX8" FT misc_feature 62959286 FT /note="Clone_left_end: RP11-490P13" FT misc_feature 62965873 FT /note="Clone_right_end: RP11-168G22" FT mRNA join(AL354803.24:166067..166164,AL354803.24:169604..169702, FT 62823960..62824080) FT /locus_tag="RP11-168G22.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI028357 Em:AI028357.1" FT misc_feature 62981531..62981582 FT /note="Sequence from AC016416 sequenced by WIBR" FT misc_feature 63037408..63037447 FT /note="Sequence from clone PCR only" FT misc_feature 63048244..63048255 FT /note="Sequence confirmed by AC016416 sequenced by WIBR" FT misc_feature 63071029..63071152 FT /note="Sequence confirmed by AC016416 sequenced by WIBR" FT misc_feature 63074963..63075248 FT /note="Sequence from AC016416 sequenced by WIBR" FT misc_feature 63075249..63075570 FT /note="Sequence confirmed by AC016416 sequenced by WIBR" FT misc_feature 63099009 FT /note="Clone_left_end: RP11-234O23" FT misc_feature 63103009..63269076 FT /note="annotated region of clone" FT misc_feature 63111149 FT /note="Clone_right_end: RP11-490P13" FT mRNA complement(join(63246418..63246591,63260138..63260227, FT AL606808.4:7673..7754,AL606808.4:39151..39237)) FT /locus_tag="RP11-234O23.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA971462 Em:AW592811" FT polyA_site complement(63246418) FT polyA_signal complement(63246432..63246437) FT misc_feature 63260578 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 500bps by restriction digest data" FT misc_feature 63267076 FT /note="Clone_right_end: RP11-234O23" FT misc_feature 63269077..63312861 FT /note="annotated region of clone" FT mRNA complement(join(AL445668.10:145410..145583, FT AL445668.10:159130..159219,63274749..63274830, FT 63306227..63306313)) FT /locus_tag="RP11-234O23.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA971462 Em:AW592811" FT mRNA complement(join(63305993..63306328,63306427..63306492)) FT /locus_tag="RP11-234O23.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AI911032" FT misc_feature 63308862 FT /note="Clone_left_end: RP11-36B21" FT misc_feature 63328313 FT /note="Clone_right_end: RP11-101F8" FT misc_feature 63453503 FT /note="Clone_left_end: RP11-564H19" FT misc_feature 63461932..63461953 FT /note="Sequence from overlapping clone bA36B21 (AL355853). FT Assembly confirmed by restriction digest" FT misc_feature 63620979 FT /note="Clone_right_end: RP11-564H19" FT misc_feature 63622980..63801202 FT /note="annotated region of clone" FT misc_feature 63635848..63635935 FT /note="Sequence confirmed by AC053537 sequenced by WUGSC" FT misc_feature 63671733..63671761 FT /note="Sequence confirmed by AC053537 sequenced by WUGSC" FT misc_feature 63739859 FT /note="Clone_left_end: RP11-282D7" FT misc_feature 63801102 FT /note="Clone_right_end: RP11-527N12" FT mRNA complement(join(63757234..63757461,63768623..63768664, FT 63801112..63801189)) FT /locus_tag="RP11-527N12.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA759092" FT misc_feature 63907534 FT /note="Clone_right_end: RP11-282D7" FT misc_feature complement(63907735) FT /note="Clone_right_end: RP11-67L17" FT misc_feature 64090621 FT /note="Clone_right_end: RP11-320N6" FT misc_feature 64171944 FT /note="Clone_left_end: RP11-473M10" FT misc_feature 64172144..64335261 FT /note="annotated region of clone" FT misc_feature 64201818 FT /note="Clone_right_end: RP11-67L17" FT polyA_site complement(64241815) FT polyA_signal complement(64241831..64241836) FT mRNA complement(join(64241814..64241972,64261535..64261688, FT 64288485..64288508,64291083..64291151)) FT /locus_tag="RP11-473M10.2-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AI352571" FT mRNA complement(join(64241815..64241966,64301184..64301215, FT 64303522..64303642,64312042..64312151)) FT /locus_tag="RP11-473M10.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AW592306 Em:BE044201" FT misc_feature 64315893..64315956 FT /note="Sequence from uni-directional dGTP Big dye FT terminator reads only" FT CDS 64316498..64316945 FT /pseudo FT /locus_tag="RP11-473M10.1-001" FT /product="olfactory receptor, family 7 (OR7) pseudogene" FT /note="match: proteins: Tr:O43789 Tr:O77549 Tr:O77551 FT Tr:Q15613 Tr:Q15618 Tr:Q28302 Tr:Q62337 Tr:Q8WZ85 Tr:Q9N1Y8 FT Tr:Q9N1Z8 Tr:Q9UPJ0 Tr:Q9UPJ1" FT mRNA join(64322132..64322530,64324837..64325213) FT /locus_tag="RP11-473M10.3-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI698221 Em:AI699410 Em:AL046588 FT Em:AL046589.1 Em:AW183800" FT polyA_signal 64325194..64325199 FT polyA_site 64325213 FT misc_feature 64335161 FT /note="Clone_right_end: RP11-473M10" FT misc_feature 64338873..64511674 FT /note="annotated region of clone" FT CDS complement(64385147..64385741) FT /pseudo FT /locus_tag="RP11-394A14.1-001" FT /product="protein phosphatase 1, regulatory (inhibitor) FT subunit 2 (PPP1R2) pseudogene" FT /note="match: proteins: Sw:O14990 Sw:P11845 Sw:P41236 FT Sw:P41236 Sw:P41236 Sw:P50411 Sw:Q9DCL8 Tr:Q96PQ5 Tr:Q9CT86 FT Tr:Q9CZ35 Tr:Q9D5H2 Tr:Q9D5I7 Tr:Q9D5P2 Tr:Q9N537 Tr:Q9V3C7 FT Tr:Q9VJE7" FT mRNA complement(join(64402902..64403292,64405587..64405985)) FT /locus_tag="RP11-394A14.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI187817 Em:AI698221 Em:AI699410 FT Em:AI807181 Em:AL046588 Em:AW183800 Em:AW269438" FT CDS 64411166..64411589 FT /pseudo FT /locus_tag="RP11-394A14.3-001" FT /product="olfactory receptor pseudogene" FT /note="match: proteins: Sw:O14581 Sw:O76100 Sw:P23271 FT Sw:P47887 Sw:P47887 Sw:Q15612 Sw:Q15612 Sw:Q60891 Sw:Q60892 FT Sw:Q8NGL1 Sw:Q8NGR9 Sw:Q96RA2 Tr:O42212 Tr:O43789 Tr:O43876 FT Tr:O77545 Tr:O77548 Tr:O77549 Tr:O77551 Tr:Q15613 Tr:Q15618 FT Tr:Q28302 Tr:Q62337 Tr:Q8WZ85 Tr:Q96N54 Tr:Q9EPY3 Tr:Q9GKF1 FT Tr:Q9GKG7 Tr:Q9GKG8 Tr:Q9JM21 Tr:Q9MYQ2 Tr:Q9N1L3 Tr:Q9N1M2 FT Tr:Q9N1Y6 Tr:Q9N1Y9 Tr:Q9N1Z2 Tr:Q9N1Z3 Tr:Q9N1Z7 Tr:Q9N1Z8 FT Tr:Q9N206 Tr:Q9N207 Tr:Q9N209 Tr:Q9N213 Tr:Q9N214 Tr:Q9N217 FT Tr:Q9N225 Tr:Q9QWW9 Tr:Q9QWX0 Tr:Q9UPJ0 Tr:Q9UPJ1 Tr:Q9Z1U3 FT Tr:Q9Z1U8" FT misc_feature 64415549 FT /note="Clone_left_end: RP11-520F9" FT misc_feature 64489991 FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 200bp by restriction digest data" FT misc_feature 64509675 FT /note="Clone_right_end: RP11-394A14" FT misc_feature 64511675..64583485 FT /note="annotated region of clone" FT CDS complement(64549584..64550555) FT /pseudo FT /locus_tag="RP11-520F9.1-001" FT /product="nuclear transcription factor Y, alpha (NFYA) FT pseudogene" FT /note="match: proteins: Sw:P18576 Sw:P23511 Sw:P23708 FT Tr:O73743 Tr:Q9DBV7" FT misc_feature 64565122 FT /note="Sequence confirmed by AC025487 sequenced by WIBR" FT misc_feature 64565287..64565333 FT /note="Sequence confirmed by AC025487 sequenced by WIBR" FT misc_feature 64565335..64565350 FT /note="Sequence confirmed by AC025487 sequenced by WIBR" FT misc_feature 64565351..64565357 FT /note="Sequence confirmed by AC025487 sequenced by WIBR" FT mRNA complement(join(64560504..64561172,64564229..64564333, FT 64576518..64576542,64577481..64577598, FT AL354736.10:26995..27185,AL354736.10:67890..68659)) FT /locus_tag="RP11-520F9.2-001" FT /product="novel transcript (FLJ32909)" FT /note="match: cDNAs: Em:AK057471" FT misc_feature 64579486 FT /note="Clone_left_end: RP11-205B18" FT misc_feature 64583486..64739945 FT /note="annotated region of clone" FT mRNA complement(join(AL355879.22:50830..51498, FT AL355879.22:54555..54659,AL355879.22:66844..66868, FT AL355879.22:67807..67924,64608480..64608670, FT 64649375..64650144)) FT /locus_tag="RP11-520F9.2-001" FT /product="novel transcript (FLJ32909)" FT /note="match: cDNAs: Em:AK057471" FT misc_feature 64737945 FT /note="Clone_right_end: RP11-205B18" FT misc_feature 64817829 FT /note="Clone_left_end: RP11-481K24" FT misc_feature 64912074 FT /note="Clone_right_end: RP11-484M8" FT misc_feature 64940636..64940840 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm the assembly" FT misc_feature 64994192 FT /note="Clone_left_end: RP11-468L10" FT misc_feature 65015034 FT /note="Clone_right_end: RP11-481K24" FT misc_feature 65111886..65111908 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 65137782 FT /note="Clone_left_end: RP11-318C5" FT misc_feature 65170013 FT /note="Clone_right_end: RP11-468L10" FT misc_feature 65286085..65286093 FT /note="Sequence from AC025729 sequenced by WUGSC" FT misc_feature 65340319 FT /note="Clone_right_end: RP11-318C5" FT misc_feature 65347449 FT /note="Clone_left_end: RP11-13B15" FT misc_feature 65462070 FT /note="Clone_left_end: RP11-261A1" FT misc_feature complement(65466070..65630559) FT /note="annotated region of clone" FT misc_feature complement(65534804..65534824) FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a clone PCR. Restriction FT digest data confirm the assembly" FT CDS complement(65532229..65533528) FT /pseudo FT /locus_tag="RP11-261A1.1-001" FT /product="legumain (LGMN) (PRSC1) pseudogene" FT /note="match: proteins: Sw:O24326 Sw:P09841 Sw:P42665 FT Sw:P49042 Sw:P49044 Sw:P49046 Sw:Q99538 Sw:Q9R0J8 Tr:O24539 FT Tr:O82102 Tr:Q17945 Tr:Q8VZY0 Tr:Q96CY7 Tr:Q9AUD9 Tr:Q9BTY1 FT Tr:Q9FER7 Tr:Q9LJX8 Tr:Q9LLQ5 Tr:Q9LWZ3 Tr:Q9M4R6 Tr:Q9NFY9 FT Tr:Q9SBX3 Tr:Q9U5N7 Tr:Q9XFZ5 Tr:Q9XG76 Tr:Q9ZP28 FT Tr:Q9ZT14" FT polyA_signal complement(65531718..65531723) FT misc_feature complement(65466070) FT /note="Clone_left_end: RP11-261A1" FT misc_feature 65659612 FT /note="Clone_left_end: RP11-211D10" FT misc_feature 65827666 FT /note="Clone_left_end: RP11-129M14" FT misc_feature 65841932 FT /note="Clone_right_end: RP11-211D10" FT misc_feature 65843933..65890658 FT /note="annotated region of clone" FT CDS complement(join(65883987..65884653,65884884..65885085)) FT /pseudo FT /locus_tag="RP11-129M14.1-001" FT /product="steroidogenic acute regulatory protein (STAR) FT pseudogene" FT /note="match: proteins: Sw:O46689 Sw:P49675 Sw:P49675 FT Sw:P51557 Sw:P51557 Sw:P51557 Sw:P58864 Sw:P70114 Sw:P79245 FT Sw:P79245 Sw:P97826 Sw:Q28918 Sw:Q28996 Sw:Q90ZB9 Sw:Q9DE06 FT Sw:Q9DG08 Sw:Q9DG09 Sw:Q9DG10" FT misc_feature 65886659 FT /note="Clone_left_end: RP11-379K8" FT misc_feature 66000068 FT /note="Clone_right_end: RP11-129M14" FT misc_feature 66021366..66021589 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 66055315 FT /note="Clone_left_end: RP11-229I7" FT misc_feature 66066448 FT /note="Clone_right_end: RP11-379K8" FT misc_feature 66164194 FT /note="Clone_left_end: RP11-326D19" FT misc_feature 66225227 FT /note="Clone_right_end: RP11-229I7" FT misc_feature 66324112 FT /note="Clone_right_end: RP11-326D19" FT misc_feature 66331929 FT /note="Clone_left_end: RP11-223F20" FT misc_feature 66335929..66502825 FT /note="annotated region of clone" FT CDS complement(66362064..66362896) FT /pseudo FT /locus_tag="RP11-223F20.1-001" FT /product="heterogeneous nuclear ribonucleoprotein A3 FT (HNRNPA3) pseudogene" FT /note="match: proteins: Sw:P51991.2 Sw:Q6URK4.1 FT Sw:Q8BG05.1" FT misc_feature 66394038 FT /note="Clone_left_end: RP11-424E21" FT mRNA join(66440306..66440375,66449839..66449901, FT 66451989..66452351) FT /locus_tag="RP11-223F20.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA889679" FT misc_feature 66500825 FT /note="Clone_right_end: RP11-223F20" FT misc_feature 66517070 FT /note="Clone_left_end: RP11-298H15" FT misc_feature 66563462 FT /note="Clone_right_end: RP11-364F8" FT misc_feature 66604441 FT /note="Clone_left_end: RP11-390J12" FT misc_feature 66677084 FT /note="Clone_right_end: RP11-298H15" FT misc_feature 66686703 FT /note="Clone_left_end: RP11-37K18" FT misc_feature 66718129..66718262 FT /note="Sequence from overlapping clone RP11-37K18 FT (AL136145).Assembly confirmed by restriction digest" FT misc_feature 66766248 FT /note="Clone_right_end: RP11-390J12" FT misc_feature 66766349..66848157 FT /note="annotated region of clone" FT CDS 66843129..66844590 FT /pseudo FT /locus_tag="RP11-37K18.1-001" FT /product="tripartite motif-containing 39 (TRIM39) FT pseudogene" FT /note="match: proteins: Sw:Q9ESN2 Sw:Q9HCM9" FT misc_feature 66846157 FT /note="Clone_right_end: RP11-37K18" FT misc_feature 66850152..67013850 FT /note="annotated region of clone" FT misc_feature 66853284..66853535 FT /note="Sequence from overlapping clone RP11-407O11 FT (AL162572). Assembly confirmed by restriction digest" FT CDS complement(join(66878787..66879160, FT AL136999.26:10365..10566,AL603863.7:16726..19761)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-001" FT /standard_name="OTTHUMP00000018490" FT /product="protocadherin 9" FT /note="match: proteins: Sw:Q9HC56.1 Tr:Q5VT83.1 FT Tr:Q7Z3U0.1" FT /protein_id="CAH72612.1" FT /translation="MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPK FT DLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA FT EENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPI FT PSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKI FT KVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADI FT GSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPA FT RATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKV FT ICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVK FT LEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL FT DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNH FT FQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDR FT EQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPG FT SVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVV FT NISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDLIRRTMETPLDRNIGDSSQPYQNEDY FT LTIMIAIIAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKR FT KKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLPAELEEQSIGRFDWGPAPPTTFKP FT NSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSD FT HFSASECSSQGGFKTKGPLHTRQSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISH FT PLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDN FT CWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS FT NEGHFNNGSHMTDIPLANLKSYKQAGGATESPKEHQL" FT mRNA complement(join(66876969..66879160, FT AL136999.26:10365..10566,AL138814.13:111400..111501, FT AL603863.7:16726..19896)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-003" FT /product="protocadherin 9" FT /note="match: cDNAs: Em:AL834258.1" FT /note="match: ESTs: Em:BM801545.1 Em:BP209371.1 FT Em:BP249104.1 Em:DA278856.1 Em:DA410121.1" FT CDS complement(join(66878787..66879160, FT AL136999.26:10365..10566,AL138814.13:111400..111501, FT AL603863.7:16726..19761)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-003" FT /standard_name="OTTHUMP00000178682" FT /product="protocadherin 9" FT /protein_id="CAM17290.1" FT /translation="MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPK FT DLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA FT EENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPI FT PSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKI FT KVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADI FT GSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPA FT RATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKV FT ICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVK FT LEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL FT DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNH FT FQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDR FT EQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPG FT SVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVV FT NISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDLIRRTMETPLDRNIGDSSQPYQNEDY FT LTIMIAIIAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKR FT KKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLPAELEEQSIGRFDWGPAPPTTFKP FT NSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSD FT HFSASECSSQGGFKTKGPLHTRQCNSHSKSDNIPVTPQKCPSSTGFHIQENEESHYESQ FT RRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADG FT NSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFAPQKE FT WVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGSNEGHFNNGSHMTDIPLANLKSYKQA FT GGATESPKEHQL" FT mRNA complement(join(66877252..66879160, FT AL136999.26:10365..10566,AL603863.7:16726..19896, FT AL603863.7:21101..21652)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-001" FT /product="protocadherin 9" FT /note="match: cDNAs: Em:BX537422.1" FT /note="match: ESTs: Em:AI300218.1" FT polyA_site complement(66876966) FT polyA_signal complement(66876982..66876987) FT polyA_site complement(66877045) FT polyA_signal complement(66877055..66877060) FT mRNA join(66878003..66878146,66897306..66897693) FT /locus_tag="RP11-335P18.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG185929 Em:BG221196" FT misc_feature 66947699..66947826 FT /note="Sequence confirmed by AC016202 sequenced by WIBR" FT misc_feature 66947827..66947867 FT /note="Sequence from AC016202 sequenced by WIBR" FT misc_feature 66947868..66947984 FT /note="Sequence confirmed by AC016202 sequenced by WIBR" FT misc_feature 66948553..66948571 FT /note="Sequence confirmed by AC016202 sequenced by WIBR" FT misc_feature 66948579..66948845 FT /note="Sequence confirmed by AC016202 sequenced by WIBR" FT misc_feature 66989567..66989634 FT /note="Sequence confirmed by AC016202 and AC01859 sequenced FT by WIBR" FT misc_feature 66989635..66996081 FT /note="Sequence from AC016202 and AC018599 sequenced by FT WIBR" FT misc_feature 66996082..66996172 FT /note="Sequence confirmed by AC016202 and AC018599 FT sequenced by WIBR" FT misc_feature 67009851 FT /note="Clone_left_end: RP11-109K20" FT misc_feature 67013851..67144291 FT /note="annotated region of clone" FT misc_feature 67048035 FT /note="Clone_right_end: RP11-335P18" FT misc_feature 67142197 FT /note="Clone_left_end: RP11-495K23" FT misc_feature 67144292..67195077 FT /note="annotated region of clone" FT misc_feature 67189026 FT /note="Clone_right_end: RP11-109K20" FT misc_feature 67194878 FT /note="Clone_left_end: RP11-187E23" FT misc_feature 67195078..67366336 FT /note="annotated region of clone" FT CDS complement(join(AL355173.25:30636..31009, FT 67205342..67205543,AL603863.7:16726..19761)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-001" FT /standard_name="OTTHUMP00000018490" FT /product="protocadherin 9" FT /note="match: proteins: Sw:Q9HC56.1 Tr:Q5VT83.1 FT Tr:Q7Z3U0.1" FT /protein_id="CAI12502.1" FT /translation="MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPK FT DLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA FT EENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPI FT PSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKI FT KVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADI FT GSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPA FT RATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKV FT ICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVK FT LEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL FT DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNH FT FQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDR FT EQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPG FT SVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVV FT NISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDLIRRTMETPLDRNIGDSSQPYQNEDY FT LTIMIAIIAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKR FT KKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLPAELEEQSIGRFDWGPAPPTTFKP FT NSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSD FT HFSASECSSQGGFKTKGPLHTRQSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISH FT PLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDN FT CWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS FT NEGHFNNGSHMTDIPLANLKSYKQAGGATESPKEHQL" FT mRNA complement(join(AL355173.25:28818..31009, FT 67205342..67205543,AL138814.13:111400..111501, FT AL603863.7:16726..19896)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-003" FT /product="protocadherin 9" FT /note="match: cDNAs: Em:AL834258.1" FT /note="match: ESTs: Em:BM801545.1 Em:BP209371.1 FT Em:BP249104.1 Em:DA278856.1 Em:DA410121.1" FT CDS complement(join(AL355173.25:30636..31009, FT 67205342..67205543,AL138814.13:111400..111501, FT AL603863.7:16726..19761)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-003" FT /standard_name="OTTHUMP00000178682" FT /product="protocadherin 9" FT /protein_id="CAM13771.1" FT /translation="MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPK FT DLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA FT EENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPI FT PSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKI FT KVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADI FT GSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPA FT RATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKV FT ICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVK FT LEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL FT DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNH FT FQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDR FT EQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPG FT SVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVV FT NISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDLIRRTMETPLDRNIGDSSQPYQNEDY FT LTIMIAIIAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKR FT KKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLPAELEEQSIGRFDWGPAPPTTFKP FT NSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSD FT HFSASECSSQGGFKTKGPLHTRQCNSHSKSDNIPVTPQKCPSSTGFHIQENEESHYESQ FT RRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADG FT NSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFAPQKE FT WVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGSNEGHFNNGSHMTDIPLANLKSYKQA FT GGATESPKEHQL" FT mRNA complement(join(AL355173.25:29101..31009, FT 67205342..67205543,AL603863.7:16726..19896, FT AL603863.7:21101..21652)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-001" FT /product="protocadherin 9" FT /note="match: cDNAs: Em:BX537422.1" FT /note="match: ESTs: Em:AI300218.1" FT misc_feature 67275074 FT /note="Clone_left_end: RP11-465H15" FT misc_feature 67365392 FT /note="Clone_left_end: RP11-10M21" FT misc_feature 67366236 FT /note="Clone_right_end: RP11-187E23" FT misc_feature 67366337..67480526 FT /note="annotated region of clone" FT mRNA complement(join(AL355173.25:28818..31009, FT AL136999.26:10365..10566,67477636..67477737, FT AL603863.7:16726..19896)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-003" FT /product="protocadherin 9" FT /note="match: cDNAs: Em:AL834258.1" FT /note="match: ESTs: Em:BM801545.1 Em:BP209371.1 FT Em:BP249104.1 Em:DA278856.1 Em:DA410121.1" FT CDS complement(join(AL355173.25:30636..31009, FT AL136999.26:10365..10566,67477636..67477737, FT AL603863.7:16726..19761)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-003" FT /standard_name="OTTHUMP00000178682" FT /product="protocadherin 9" FT /protein_id="CAM13066.1" FT /translation="MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPK FT DLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA FT EENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPI FT PSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKI FT KVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADI FT GSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPA FT RATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKV FT ICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVK FT LEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL FT DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNH FT FQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDR FT EQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPG FT SVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVV FT NISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDLIRRTMETPLDRNIGDSSQPYQNEDY FT LTIMIAIIAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKR FT KKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLPAELEEQSIGRFDWGPAPPTTFKP FT NSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSD FT HFSASECSSQGGFKTKGPLHTRQCNSHSKSDNIPVTPQKCPSSTGFHIQENEESHYESQ FT RRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADG FT NSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFAPQKE FT WVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGSNEGHFNNGSHMTDIPLANLKSYKQA FT GGATESPKEHQL" FT mRNA join(67433130..67433252,67450976..67451051, FT 67460132..67460209,AL138682.13:8104..8192, FT AL138682.13:8643..8737) FT /locus_tag="RP11-138D23.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA889658" FT misc_feature 67480327 FT /note="Clone_left_end: RP11-138D23" FT misc_feature 67480527..67645030 FT /note="annotated region of clone" FT polyA_signal 67489144..67489149 FT polyA_site 67489163 FT misc_feature 67523623 FT /note="Clone_right_end: RP11-10M21" FT mRNA join(AL138814.13:66894..67016,AL138814.13:84740..84815, FT AL138814.13:93896..93973,67488530..67488618, FT 67489069..67489163) FT /locus_tag="RP11-138D23.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA889658" FT mRNA join(67551564..67551663,67552505..67552603, FT 67559629..67559908) FT /locus_tag="RP11-138D23.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI073488" FT mRNA join(67565018..67565231,67570354..67570413, FT 67575978..67576139) FT /locus_tag="RP11-138D23.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI809643" FT polyA_signal 67576106..67576111 FT polyA_site 67576132 FT misc_feature 67590870 FT /note="Clone_left_end: RP11-576O3" FT misc_feature 67593521..67593893 FT /note="Sequence from overlapping clone bA576O3 (AL160254). FT Assembly confirmed by restriction digest" FT misc_feature 67630751..67630996 FT /note="Sequence from overlapping clone bA576O3 (AL160254). FT Assembly confirmed by restriction digest" FT misc_feature 67644930 FT /note="Clone_right_end: RP11-138D23" FT misc_feature 67645031..67784811 FT /note="annotated region of clone" FT misc_feature 67716680 FT /note="Clone_left_end: RP11-326B4" FT misc_feature 67784711 FT /note="Clone_right_end: RP11-576O3" FT misc_feature 67784812..67852585 FT /note="annotated region of clone" FT misc_feature 67798024..67798113 FT /note="Sequence from overlapping clone RP11-326B4 FT (AL139325). Assembly confirmed by restriction digest" FT polyA_site complement(67798863) FT polyA_signal complement(67798917..67798922) FT CDS complement(67799474..67802572) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-002" FT /standard_name="OTTHUMP00000018491" FT /product="protocadherin 9" FT /protein_id="CAH72758.1" FT /translation="MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPK FT DLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA FT EENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPI FT PSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKI FT KVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADI FT GSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPA FT RATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKV FT ICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVK FT LEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL FT DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNH FT FQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDR FT EQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPG FT SVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVV FT NISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDLIRRTMETPLDRNIGDSSQPYQNEDY FT LTIMIAIIAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKR FT KKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLPAELEEQSIGRFDWGPAPPTTFKP FT NSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSD FT HFSASECSSQGGFKTKGPLHTRQVNEHFYWSISTAYKCPVNQY" FT CDS complement(join(AL355173.25:30636..31009, FT AL136999.26:10365..10566,67799537..67802572)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-001" FT /standard_name="OTTHUMP00000018490" FT /product="protocadherin 9" FT /note="match: proteins: Sw:Q9HC56.1 Tr:Q5VT83.1 FT Tr:Q7Z3U0.1" FT /protein_id="CAH72759.1" FT /translation="MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPK FT DLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA FT EENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPI FT PSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKI FT KVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADI FT GSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPA FT RATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKV FT ICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVK FT LEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL FT DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNH FT FQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDR FT EQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPG FT SVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVV FT NISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDLIRRTMETPLDRNIGDSSQPYQNEDY FT LTIMIAIIAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKR FT KKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLPAELEEQSIGRFDWGPAPPTTFKP FT NSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSD FT HFSASECSSQGGFKTKGPLHTRQSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISH FT PLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDN FT CWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS FT NEGHFNNGSHMTDIPLANLKSYKQAGGATESPKEHQL" FT mRNA complement(join(AL355173.25:28818..31009, FT AL136999.26:10365..10566,AL138814.13:111400..111501, FT 67799537..67802707)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-003" FT /product="protocadherin 9" FT /note="match: ESTs: Em:BM801545.1 Em:BP209371.1 FT Em:BP249104.1 Em:DA278856.1 Em:DA410121.1" FT /note="match: cDNAs: Em:AL834258.1" FT CDS complement(join(AL355173.25:30636..31009, FT AL136999.26:10365..10566,AL138814.13:111400..111501, FT 67799537..67802572)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-003" FT /standard_name="OTTHUMP00000178682" FT /product="protocadherin 9" FT /protein_id="CAM17491.1" FT /translation="MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPK FT DLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA FT EENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPI FT PSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKI FT KVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADI FT GSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPA FT RATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKV FT ICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVK FT LEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDL FT DRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNH FT FQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDR FT EQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPG FT SVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVV FT NISDLGYPKSLHTLVLVFLYVNDTAGNASYIYDLIRRTMETPLDRNIGDSSQPYQNEDY FT LTIMIAIIAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKR FT KKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLPAELEEQSIGRFDWGPAPPTTFKP FT NSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSD FT HFSASECSSQGGFKTKGPLHTRQCNSHSKSDNIPVTPQKCPSSTGFHIQENEESHYESQ FT RRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADG FT NSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFAPQKE FT WVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGSNEGHFNNGSHMTDIPLANLKSYKQA FT GGATESPKEHQL" FT mRNA complement(join(67798863..67802707,67803912..67804463)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-002" FT /product="protocadherin 9" FT /note="match: ESTs: Em:AA644586 Em:AI791167 Em:AI985544 FT Em:AL560435 Em:AL560436 Em:AW529464 Em:BF666580 Em:BG115127 FT Em:BM473414 Em:BM562629 Em:BM807082" FT /note="match: cDNAs: Em:AB062939" FT mRNA complement(join(AL355173.25:29101..31009, FT AL136999.26:10365..10566,67799537..67802707, FT 67803912..67804463)) FT /gene="PCDH9" FT /locus_tag="RP11-335P18.3-001" FT /product="protocadherin 9" FT /note="match: ESTs: Em:AI300218.1" FT /note="match: cDNAs: Em:BX537422.1" FT polyA_signal complement(67840902..67840907) FT CDS complement(67840977..67841838) FT /pseudo FT /locus_tag="RP11-346A3.2-001" FT /product="laminin receptor 1 (ribosomal protein SA, 67kDa) FT (LAMR1) pseudogene" FT /note="match: proteins: Sw:P08865 Sw:P08865 Sw:P38979 FT Sw:P38980 Sw:P38981 Sw:P38983 Sw:Q01661 Sw:Q8H173 Tr:Q90YS4 FT Tr:Q91V31 Tr:Q96RS2 Tr:Q9CY13 Tr:Q9GRE3 Tr:Q9GRE4 FT Tr:Q9GRE5" FT misc_feature 67852586 FT /note="Clone_left_end: RP11-531B22" FT misc_feature 67867953..67868129 FT /note="Sequence from clone PCR only" FT misc_feature 67913862..67913930 FT /note="Sequence from uni-directional primer reads and dGTP FT big dye terminator reads only" FT misc_feature 67935430 FT /note="Clone_left_end: RP11-631G24" FT misc_feature 67935530..68108312 FT /note="annotated region of clone" FT mRNA join(67946519..67946602,67948997..67949097, FT 67953683..67954108) FT /locus_tag="RP11-631G24.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG210290 Em:BG210291 Em:BG215056" FT polyA_signal 67954101..67954107 FT misc_feature 68021719 FT /note="Clone_right_end: RP11-531B22" FT misc_feature 68108212 FT /note="Clone_right_end: RP11-631G24" FT misc_feature 68181991..68182186 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 68182210 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 50bp by restriction digest data" FT misc_feature 68202476 FT /note="Clone_left_end: RP11-51P14" FT misc_feature 68250025 FT /note="Clone_right_end: RP11-520F22" FT misc_feature 68272887 FT /note="Clone_left_end: RP11-562L19" FT misc_feature 68354373 FT /note="Clone_left_end: RP11-248N6" FT misc_feature complement(68356473..68519067) FT /note="annotated region of clone" FT CDS 68485219..68486080 FT /pseudo FT /locus_tag="RP11-248N6.2-001" FT /product="olfactory receptor pseudogene" FT /note="match: proteins: Sw:O14581 Sw:O76100 Tr:Q8VF15 FT Tr:Q8VF45 Tr:Q8VFF7 Tr:Q8VFJ2 Tr:Q8VFQ2 Tr:Q8VGG4 Tr:Q8VGG6 FT Tr:Q9JM16" FT CDS 68476487..68477374 FT /pseudo FT /locus_tag="RP11-248N6.1-001" FT /product="olfactory receptor pseudogene" FT /note="match: proteins: Sw:O14581 Sw:O76100 Tr:Q8VF15 FT Tr:Q8VF45 Tr:Q8VFF7 Tr:Q8VFJ2 Tr:Q8VFQ2 Tr:Q8VGG4 Tr:Q8VGG6 FT Tr:Q9JM16" FT misc_feature complement(68447766) FT /note="Clone_right_end: RP11-521L15" FT misc_feature complement(68435664) FT /note="Clone_left_end: RP11-562L19" FT CDS complement(68406008..68406959) FT /pseudo FT /locus_tag="RP11-248N6.3-001" FT /product="nucleophosmin (nucleolar phosphoprotein B23, FT numatrin) NPM1 pseudogene" FT /note="match: proteins: Sw:P06748 Sw:P06748 Sw:P07222" FT polyA_signal complement(68405712..68405717) FT misc_feature 68595454 FT /note="Clone_right_end: RP11-521L15" FT misc_feature 68654472..68654614 FT /note="Sequence from overlapping clone RP11-100I7 FT (AL357043). Assembly confirmed by restriction digest" FT misc_feature 68654614 FT /note="Tandem repeat. Forced join. Assembly confirmed by FT restriction digest data" FT misc_feature 68658111 FT /note="Clone_left_end: RP11-157F14" FT misc_feature 68717231..68717235 FT /note="1215 bases of is5B transposon (U59365) removed here FT Flanking repeat sequences are irregular (CTTAA in my FT project CTAG is the recorded flanking sequence)" FT misc_feature 68745382..68745435 FT /note="readraid only area" FT misc_feature 68758359 FT /note="Clone_right_end: RP11-100I7" FT misc_feature 68781898 FT /note="Clone_left_end: RP11-520F24" FT misc_feature 68783998..68943132 FT /note="annotated region of clone" FT misc_feature 68840359 FT /note="Clone_right_end: RP11-157F14" FT CDS complement(68863811..68865412) FT /pseudo FT /locus_tag="RP11-520F24.2-001" FT /product="ELL-related RNA polymerase II, elongation factor FT (ELL2) pseudogene" FT /note="match: proteins: Sw:O00472" FT CDS complement(join(68875737..68876365,68877137..68877434)) FT /pseudo FT /locus_tag="RP11-520F24.1-001" FT /product="novel HNRPA1 (heterogeneous nuclear FT ribonucleoprotein A1) pseudogene" FT /note="match: proteins: Sw:P04256 Sw:P09651 Sw:P09867 FT Sw:P17130 Sw:P49312 Sw:P51968 Sw:P51990 Sw:P51991 Sw:P51992 FT Sw:Q28521" FT misc_feature 68902613 FT /note="Clone_left_end: RP11-23B16" FT CDS complement(68905470..68905745) FT /pseudo FT /locus_tag="RP11-520F24.3-001" FT /product="ribosomal protein L37 (RPL37) pseudogene" FT /note="match: proteins: Sw:P61928 Sw:P79244 Sw:Q90YT1 FT Sw:Q9D823 Tr:Q9D823 Tr:Q9D823 Tr:Q9D823 Tr:Q9D823 Tr:Q9D823 FT Tr:Q9D823" FT misc_feature 68943032 FT /note="Clone_right_end: RP11-520F24" FT misc_feature 68997035 FT /note="Clone_left_end: RP11-321F21" FT misc_feature 69049015 FT /note="Clone_right_end: RP11-23B16" FT misc_feature 69130117 FT /note="Clone_left_end: RP11-430K22" FT misc_feature 69130317..69307155 FT /note="annotated region of clone" FT misc_feature 69186079 FT /note="Clone_right_end: RP11-321F21" FT CDS 69208322..69208618 FT /pseudo FT /locus_tag="RP11-430K22.1-001" FT /product="pseudogene similar to part of ribosomal protein FT S3A RPS3A" FT /note="match: proteins: Sw:P61247 Sw:Q98TX2 Tr:Q564F3" FT CDS 69228704..69229182 FT /pseudo FT /locus_tag="RP11-430K22.2-001" FT /product="60S ribosomal protein L12 (RPL12) pseudogene" FT /note="match: proteins: Sw:O50003 Sw:O75000 Sw:P23358 FT Sw:P30050 Sw:P35979 Sw:P50883 Sw:P61865 Sw:P61866 Sw:Q9C285 FT Sw:Q9LFH5 Tr:Q95V38 Tr:Q9W1B9 Tr:Q9ZSL1" FT misc_feature 69250798..69250816 FT /note="Sequence from uni-directional primer reads and dGTP FT big dye terminator reads only" FT misc_feature 69282701 FT /note="Clone_left_end: RP11-370A2" FT misc_feature 69307055 FT /note="Clone_right_end: RP11-430K22" FT misc_feature 69320727 FT /note="Weak data" FT misc_feature 69320731 FT /note="Weak data" FT misc_feature 69320747 FT /note="Weak data" FT misc_feature 69358630 FT /note="Clone_left_end: RP11-411G9" FT misc_feature 69436507 FT /note="Clone_right_end: RP11-370A2" FT misc_feature 69500397 FT /note="Clone_left_end: RP11-264M20" FT misc_feature 69500597..69637742 FT /note="annotated region of clone" FT misc_feature 69547151 FT /note="Clone_left_end: RP11-452P23" FT CDS 69559190..69560196 FT /pseudo FT /locus_tag="RP11-264M20.1-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:O14345 Sw:P42836 Sw:Q96MV8 FT Sw:Q9JKR5 Sw:Q9UIJ5 Tr:O49656 Tr:Q8SVX7 Tr:Q93VV0 Tr:Q960T3 FT Tr:Q9SR31 Tr:Q9V5F0 Tr:Q9V5F0 Tr:Q9V7Z7" FT misc_feature 69637642 FT /note="Clone_right_end: RP11-264M20" FT misc_feature 69637743..69730889 FT /note="annotated region of clone" FT CDS complement(69675964..69676188) FT /pseudo FT /locus_tag="RP11-452P23.2-001" FT /product="small nuclear ribonucleoprotein polypeptide F FT (SNRPF) pseudogene" FT /note="match: proteins: Sw:P62307 Sw:P62307 Sw:Q24297 FT Sw:Q24297 Tr:P62306" FT misc_feature 69691025 FT /note="Clone_left_end: RP11-231D2" FT misc_feature 69730789 FT /note="Clone_right_end: RP11-452P23" FT misc_feature 69732884..69881838 FT /note="annotated region of clone" FT misc_feature 69759324..69759332 FT /note="Sequence confirmed by AC016709 sequenced by WUGSC" FT misc_feature 69769020..69769099 FT /note="Sequence confirmed by AC016709 sequenced by WUGSC" FT misc_feature 69781870..69781887 FT /note="Sequence from overlapping clone RP11-231D2 FT (AL591383). Assembly confirmed by restriction digest" FT mRNA join(69796478..69796580,69844023..69844083, FT 69849272..69849396,69865759..69866286) FT /locus_tag="RP11-501G6.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG527271.1" FT misc_feature 69865272 FT /note="Clone_right_end: RP11-231D2" FT misc_feature 69877839 FT /note="Clone_left_end: RP11-459J23" FT misc_feature 69881839..70054594 FT /note="annotated region of clone" FT mRNA join(69885465..69885528,69895477..69896233) FT /locus_tag="RP11-459J23.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BM557184" FT misc_feature 69896642 FT /note="Clone_right_end: RP11-501G6" FT misc_feature 69964989..69965040 FT /note="Single clone region. assembly confirmed by FT restriction digest data" FT CDS complement(69982348..69982867) FT /pseudo FT /locus_tag="RP11-459J23.2-001" FT /product="splicing factor, arginine/serine-rich 1 (splicing FT factor 2, alternate splicing factor) (SFRS1) pseudogene" FT /note="match: proteins: Sw:Q07955 Sw:Q9D0B0 Sw:Q9NEW6 FT Tr:Q9CA06 Tr:Q9XFR5" FT misc_feature 69997991 FT /note="Clone_left_end: RP11-237E3" FT misc_feature 70052614 FT /note="Clone_right_end: RP11-459J23" FT misc_feature 70073119 FT /note="Clone_left_end: RP11-480O9" FT misc_feature 70110674 FT /note="Clone_right_end: RP11-62J23" FT misc_feature 70145819 FT /note="Clone_left_end: RP11-394C23" FT misc_feature 70147919..70323638 FT /note="annotated region of clone" FT mRNA complement(join(70274726..70275893,70281757..70281928, FT 70293501..70293713,70314526..70314688, FT AL356384.9:47332..47556,AL356384.9:89570..89756, FT AL353738.16:29983..30195,AL353738.16:87740..87936, FT AL353738.16:109008..109144,AL353738.16:123320..123502, FT AL160391.13:36707..37963)) FT /gene="KLHL1" FT /locus_tag="RP11-394C23.1-001" FT /product="kelch-like 1 (Drosophila)" FT /note="match: cDNAs: Em:AB040923.1 Em:AF252283.1 FT Em:BC022460.1" FT CDS complement(join(70275834..70275893,70281757..70281928, FT 70293501..70293713,70314526..70314688, FT AL356384.9:47332..47556,AL356384.9:89570..89756, FT AL353738.16:29983..30195,AL353738.16:87740..87936, FT AL353738.16:109008..109144,AL353738.16:123320..123502, FT AL160391.13:36707..37203)) FT /gene="KLHL1" FT /locus_tag="RP11-394C23.1-001" FT /standard_name="OTTHUMP00000018492" FT /product="kelch-like 1 (Drosophila)" FT /note="match: proteins: Sw:Q9NR64.1 Tr:Q8TBJ7.1" FT /protein_id="CAH73330.2" FT /translation="MSGSGRKDFDVKHILRLRWKLFSHPSPSTGGPAGGGCLQQDGSGS FT FEHWGPSQSRLLKSQERSGVSTFWKKPSSSSSSSSSPSSSSSSFNPLNGTLLPVATRLQ FT QGAPGQGTQQPARTLFYVESLEEEVVPGMDFPGPHEKGLVLQELKVEPDNSSQATGEGC FT GHRLSSTGHSMTPQSDLDSSSSEEFYQAVHHAEQTFRKMESYLKQQQLCDVILIVGNRK FT IPAHRLVLSSVSDYFAAMFTSDVCEAKQEEIKMEGIDPNALWDLVQFAYTGCLELKEDT FT IENLLAAACLLQLPQVVEVCCHFLMKLLHPSNCLGIRAFADAQGCIELMKVAHSYTMEN FT IMEVIRNQEFLLLPAEELHKLLASDDVNVPDEETIFHALMMWVKYDMQSRCNDLSMLLA FT FIRLPLLPPQILADLENHALFKNDLECQKLILEAMKYHLLPERRTLMQSPRTKPRKSTV FT GTLYAVGGMDNNKGATTIEKYDLRTNLWIQAGMMNGRRLQFGVAVIDDKLFVIGGRDGL FT KTLNTVECYNPKTKTWTVLPPMSTHRHGLGVTVLEGPIYAVGGHDGWSYLNTVERWDPQ FT SQQWTFVASMSIARSTVGVAALNGKLYSVGGRDGSSCLSSMEYYDPHTNKWNMCAPMCK FT RRGGVGVATCDGFLYAVGGHDAPASNHCSRLLDYVERYDPKTDTWTMVAPLSMPRDAVG FT VCLLGDRLYAVGGYDGQTYLNTMESYDPQTNEWTQMASLNIGRAGACVVVIKQP" FT misc_feature 70240530 FT /note="Clone_left_end: RP11-436I5" FT misc_feature 70260229..70260279 FT /note="Single clone region. Sequence from clone PCR only" FT polyA_site complement(70274725) FT polyA_signal complement(70274746..70274751) FT misc_feature 70323538 FT /note="Clone_right_end: RP11-394C23" FT misc_feature 70323639..70417438 FT /note="annotated region of clone" FT mRNA complement(join(AL162378.16:126908..128075, FT AL162378.16:133939..134110,AL162378.16:145683..145895, FT AL162378.16:166708..166870,70370870..70371094, FT 70413108..70413294,AL353738.16:29983..30195, FT AL353738.16:87740..87936,AL353738.16:109008..109144, FT AL353738.16:123320..123502,AL160391.13:36707..37963)) FT /gene="KLHL1" FT /locus_tag="RP11-394C23.1-001" FT /product="kelch-like 1 (Drosophila)" FT /note="match: cDNAs: Em:AB040923.1 Em:AF252283.1 FT Em:BC022460.1" FT CDS complement(join(AL162378.16:128016..128075, FT AL162378.16:133939..134110,AL162378.16:145683..145895, FT AL162378.16:166708..166870,70370870..70371094, FT 70413108..70413294,AL353738.16:29983..30195, FT AL353738.16:87740..87936,AL353738.16:109008..109144, FT AL353738.16:123320..123502,AL160391.13:36707..37203)) FT /gene="KLHL1" FT /locus_tag="RP11-394C23.1-001" FT /standard_name="OTTHUMP00000018492" FT /product="kelch-like 1 (Drosophila)" FT /note="match: proteins: Sw:Q9NR64.1 Tr:Q8TBJ7.1" FT /protein_id="CAH73834.2" FT /translation="MSGSGRKDFDVKHILRLRWKLFSHPSPSTGGPAGGGCLQQDGSGS FT FEHWGPSQSRLLKSQERSGVSTFWKKPSSSSSSSSSPSSSSSSFNPLNGTLLPVATRLQ FT QGAPGQGTQQPARTLFYVESLEEEVVPGMDFPGPHEKGLVLQELKVEPDNSSQATGEGC FT GHRLSSTGHSMTPQSDLDSSSSEEFYQAVHHAEQTFRKMESYLKQQQLCDVILIVGNRK FT IPAHRLVLSSVSDYFAAMFTSDVCEAKQEEIKMEGIDPNALWDLVQFAYTGCLELKEDT FT IENLLAAACLLQLPQVVEVCCHFLMKLLHPSNCLGIRAFADAQGCIELMKVAHSYTMEN FT IMEVIRNQEFLLLPAEELHKLLASDDVNVPDEETIFHALMMWVKYDMQSRCNDLSMLLA FT FIRLPLLPPQILADLENHALFKNDLECQKLILEAMKYHLLPERRTLMQSPRTKPRKSTV FT GTLYAVGGMDNNKGATTIEKYDLRTNLWIQAGMMNGRRLQFGVAVIDDKLFVIGGRDGL FT KTLNTVECYNPKTKTWTVLPPMSTHRHGLGVTVLEGPIYAVGGHDGWSYLNTVERWDPQ FT SQQWTFVASMSIARSTVGVAALNGKLYSVGGRDGSSCLSSMEYYDPHTNKWNMCAPMCK FT RRGGVGVATCDGFLYAVGGHDAPASNHCSRLLDYVERYDPKTDTWTMVAPLSMPRDAVG FT VCLLGDRLYAVGGYDGQTYLNTMESYDPQTNEWTQMASLNIGRAGACVVVIKQP" FT misc_feature 70417439..70428432 FT /note="annotated region of clone" FT misc_feature 70419438 FT /note="Clone_right_end: RP11-436I5" FT misc_feature 70426433 FT /note="Clone_left_end: RP11-206H15" FT misc_feature 70428433..70550838 FT /note="annotated region of clone" FT mRNA complement(join(AL162378.16:126908..128075, FT AL162378.16:133939..134110,AL162378.16:145683..145895, FT AL162378.16:166708..166870,AL356384.9:47332..47556, FT AL356384.9:89570..89756,70456415..70456627, FT 70514172..70514368,70535440..70535576,70549752..70549934, FT AL160391.13:36707..37963)) FT /gene="KLHL1" FT /locus_tag="RP11-394C23.1-001" FT /product="kelch-like 1 (Drosophila)" FT /note="match: cDNAs: Em:AB040923.1 Em:AF252283.1 FT Em:BC022460.1" FT CDS complement(join(AL162378.16:128016..128075, FT AL162378.16:133939..134110,AL162378.16:145683..145895, FT AL162378.16:166708..166870,AL356384.9:47332..47556, FT AL356384.9:89570..89756,70456415..70456627, FT 70514172..70514368,70535440..70535576,70549752..70549934, FT AL160391.13:36707..37203)) FT /gene="KLHL1" FT /locus_tag="RP11-394C23.1-001" FT /standard_name="OTTHUMP00000018492" FT /product="kelch-like 1 (Drosophila)" FT /note="match: proteins: Sw:Q9NR64.1 Tr:Q8TBJ7.1" FT /protein_id="CAH71287.2" FT /translation="MSGSGRKDFDVKHILRLRWKLFSHPSPSTGGPAGGGCLQQDGSGS FT FEHWGPSQSRLLKSQERSGVSTFWKKPSSSSSSSSSPSSSSSSFNPLNGTLLPVATRLQ FT QGAPGQGTQQPARTLFYVESLEEEVVPGMDFPGPHEKGLVLQELKVEPDNSSQATGEGC FT GHRLSSTGHSMTPQSDLDSSSSEEFYQAVHHAEQTFRKMESYLKQQQLCDVILIVGNRK FT IPAHRLVLSSVSDYFAAMFTSDVCEAKQEEIKMEGIDPNALWDLVQFAYTGCLELKEDT FT IENLLAAACLLQLPQVVEVCCHFLMKLLHPSNCLGIRAFADAQGCIELMKVAHSYTMEN FT IMEVIRNQEFLLLPAEELHKLLASDDVNVPDEETIFHALMMWVKYDMQSRCNDLSMLLA FT FIRLPLLPPQILADLENHALFKNDLECQKLILEAMKYHLLPERRTLMQSPRTKPRKSTV FT GTLYAVGGMDNNKGATTIEKYDLRTNLWIQAGMMNGRRLQFGVAVIDDKLFVIGGRDGL FT KTLNTVECYNPKTKTWTVLPPMSTHRHGLGVTVLEGPIYAVGGHDGWSYLNTVERWDPQ FT SQQWTFVASMSIARSTVGVAALNGKLYSVGGRDGSSCLSSMEYYDPHTNKWNMCAPMCK FT RRGGVGVATCDGFLYAVGGHDAPASNHCSRLLDYVERYDPKTDTWTMVAPLSMPRDAVG FT VCLLGDRLYAVGGYDGQTYLNTMESYDPQTNEWTQMASLNIGRAGACVVVIKQP" FT CDS complement(70468233..70469217) FT /pseudo FT /locus_tag="RP11-206H15.2-001" FT /product="proteasome (prosome, macropain) 26S subunit, FT ATPase, 1 (PSMC1) pseudogene" FT /note="match: proteins: Sw:O74894 Sw:P43686 Sw:P54778 FT Sw:Q63570 Sw:Q8SQI9 Sw:Q9SEI4 Tr:Q6ZWN9" FT misc_feature 70475642..70475643 FT /note="Forced join. IS2 transposon excised from this point. FT NB. Flanking repeat sequences were irregular" FT misc_feature 70548838 FT /note="Clone_right_end: RP11-206H15" FT misc_feature 70550839..70646628 FT /note="annotated region of clone" FT misc_feature 70642629 FT /note="Clone_left_end: RP11-121J6" FT misc_feature 70646629..70811385 FT /note="annotated region of clone" FT mRNA complement(join(AL162378.16:126908..128075, FT AL162378.16:133939..134110,AL162378.16:145683..145895, FT AL162378.16:166708..166870,AL356384.9:47332..47556, FT AL356384.9:89570..89756,AL353738.16:29983..30195, FT AL353738.16:87740..87936,AL353738.16:109008..109144, FT AL353738.16:123320..123502,70681335..70682591)) FT /gene="KLHL1" FT /locus_tag="RP11-394C23.1-001" FT /product="kelch-like 1 (Drosophila)" FT /note="match: cDNAs: Em:AB040923.1 Em:AF252283.1 FT Em:BC022460.1" FT CDS complement(join(AL162378.16:128016..128075, FT AL162378.16:133939..134110,AL162378.16:145683..145895, FT AL162378.16:166708..166870,AL356384.9:47332..47556, FT AL356384.9:89570..89756,AL353738.16:29983..30195, FT AL353738.16:87740..87936,AL353738.16:109008..109144, FT AL353738.16:123320..123502,70681335..70681831)) FT /gene="KLHL1" FT /locus_tag="RP11-394C23.1-001" FT /standard_name="OTTHUMP00000018492" FT /product="kelch-like 1 (Drosophila)" FT /note="match: proteins: Sw:Q9NR64.1 Tr:Q8TBJ7.1" FT /protein_id="CAH70258.2" FT /translation="MSGSGRKDFDVKHILRLRWKLFSHPSPSTGGPAGGGCLQQDGSGS FT FEHWGPSQSRLLKSQERSGVSTFWKKPSSSSSSSSSPSSSSSSFNPLNGTLLPVATRLQ FT QGAPGQGTQQPARTLFYVESLEEEVVPGMDFPGPHEKGLVLQELKVEPDNSSQATGEGC FT GHRLSSTGHSMTPQSDLDSSSSEEFYQAVHHAEQTFRKMESYLKQQQLCDVILIVGNRK FT IPAHRLVLSSVSDYFAAMFTSDVCEAKQEEIKMEGIDPNALWDLVQFAYTGCLELKEDT FT IENLLAAACLLQLPQVVEVCCHFLMKLLHPSNCLGIRAFADAQGCIELMKVAHSYTMEN FT IMEVIRNQEFLLLPAEELHKLLASDDVNVPDEETIFHALMMWVKYDMQSRCNDLSMLLA FT FIRLPLLPPQILADLENHALFKNDLECQKLILEAMKYHLLPERRTLMQSPRTKPRKSTV FT GTLYAVGGMDNNKGATTIEKYDLRTNLWIQAGMMNGRRLQFGVAVIDDKLFVIGGRDGL FT KTLNTVECYNPKTKTWTVLPPMSTHRHGLGVTVLEGPIYAVGGHDGWSYLNTVERWDPQ FT SQQWTFVASMSIARSTVGVAALNGKLYSVGGRDGSSCLSSMEYYDPHTNKWNMCAPMCK FT RRGGVGVATCDGFLYAVGGHDAPASNHCSRLLDYVERYDPKTDTWTMVAPLSMPRDAVG FT VCLLGDRLYAVGGYDGQTYLNTMESYDPQTNEWTQMASLNIGRAGACVVVIKQP" FT mRNA join(70681345..70681873,70689273..70689430, FT 70703916..70704016,70704810..70704974) FT /locus_tag="RP11-121J6.2-002" FT /product="novel transcript" FT /note="match: cDNAs: Em:AF126749.1" FT mRNA join(70682044..70682151,70689273..70689430, FT 70703916..70704016,70704810..70705678) FT /locus_tag="RP11-121J6.2-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AF252280" FT polyA_signal 70705656..70705661 FT polyA_site 70705678 FT misc_feature 70809385 FT /note="Clone_right_end: RP11-121J6" FT misc_feature 70890437 FT /note="Clone_right_end: RP11-2J7" FT misc_feature 70915818 FT /note="Clone_left_end: RP11-452L13" FT misc_feature 70980977 FT /note="Clone_right_end: RP11-286B9" FT misc_feature 71016809 FT /note="Clone_left_end: RP11-475F14" FT misc_feature 71107056 FT /note="Clone_right_end: RP11-452L13" FT misc_feature 71118251 FT /note="Clone_left_end: RP11-280J7" FT misc_feature 71168262 FT /note="Clone_right_end: RP11-475F14" FT misc_feature 71295803 FT /note="Clone_right_end: RP11-280J7" FT misc_feature 71359143 FT /note="Clone_right_end: RP11-335H23" FT misc_feature 71396334 FT /note="Clone_left_end: RP11-184L18" FT misc_feature 71400334..71519829 FT /note="annotated region of clone" FT misc_feature 71441394 FT /note="Clone_right_end: RP11-150L15" FT CDS 71497796..71498587 FT /pseudo FT /locus_tag="RP11-184L18.1-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:O94964 Tr:Q9Y4B5" FT misc_feature 71517730 FT /note="Clone_left_end: RP11-1G3" FT misc_feature 71519830..71664298 FT /note="annotated region of clone" FT misc_feature 71555329..71555602 FT /note="Tandem repeat. Contains forced join. Assembly is FT confirmed by restriction digest" FT mRNA join(71589273..71589380, FT complement(AL139803.12:54539..54589), FT complement(AL139803.12:30349..30405), FT complement(AL139803.12:29358..30089)) FT /locus_tag="RP11-77P3.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA431403.1 Em:AA431807 Em:AA431807.1 FT Em:AI480312.1" FT misc_feature 71615509 FT /note="Clone_left_end: RP11-77P3" FT misc_feature 71664198 FT /note="Clone_right_end: RP11-1G3" FT misc_feature complement(71664299..71771906) FT /note="annotated region of clone" FT polyA_site 71742549 FT polyA_signal 71742529..71742534 FT mRNA join(AL139001.14:69544..69651,71717318..71717368, FT 71741502..71741558,71741818..71742549) FT /locus_tag="RP11-77P3.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA431403.1 Em:AA431807 Em:AA431807.1 FT Em:AI480312.1" FT misc_feature complement(71699331) FT /note="Clone_right_end: RP11-209P2" FT misc_feature complement(71664299) FT /note="Clone_left_end: RP11-77P3" FT misc_feature 71771907..71896224 FT /note="annotated region of clone" FT CDS 71870342..71871367 FT /pseudo FT /locus_tag="RP11-209P2.1-001" FT /product="rab9 effector p40 (RAB9P40) pseudogene" FT /note="match: proteins: Tr:O00568 Tr:Q8VCH5 Tr:Q9BWB1" FT misc_feature 71896124 FT /note="Clone_right_end: RP11-209P2" FT misc_feature 71899535 FT /note="Clone_left_end: RP11-512J14" FT misc_feature 71899735..72049216 FT /note="annotated region of clone" FT mRNA join(AL139186.16:44076..45352, FT complement(AL138698.15:29874..29989), FT complement(AL163542.8:155572..155733), FT complement(AL163542.8:97856..98028), FT complement(AL163542.8:84836..84971), FT complement(AL163542.8:82040..82174), FT complement(AL163542.8:14013..14164), FT complement(AL163542.8:4185..4332), FT complement(AL163542.8:722..865), FT complement(AL163542.8:157..225), FT complement(72012098..72014824)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-001" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: cDNAs: Em:AF090437 Em:AF102546 Em:AF129510 FT Em:AF356492 Em:AF427108 Em:AF427110 Em:AF427472 Em:AJ005670 FT Em:AJ308401 Em:AK001000 Em:AL079278 Em:BC021219" FT /note="match: ESTs: Em:AA219327 Em:AA219450 Em:AA252079 FT Em:AA252130 Em:AA677921 Em:AA911675 Em:AI002524 Em:AI204557 FT Em:AI220096 Em:AI355380 Em:AI375131 Em:AI498677 Em:AI522192 FT Em:AI680922 Em:AI741454 Em:AJ410722 Em:AU118230 Em:AU144853 FT Em:AW592446 Em:AW664022 Em:AW772082 Em:AW856344 Em:BB646272 FT Em:BB665221 Em:BE220048 Em:BE549771 Em:BE666944 Em:BE756347 FT Em:BE831600 Em:BF078676 Em:BF684083 Em:BF685404 Em:BG075820 FT Em:BG337852 Em:BG338090 Em:BG705914 Em:BI767381 Em:BI834727 FT Em:BQ424238 Em:BQ440916 Em:BQ549536 Em:D80570 Em:R11546 FT Em:R19271 Em:T11719" FT CDS join(AL139186.16:44499..45352, FT complement(AL138698.15:29874..29989), FT complement(AL163542.8:155572..155733), FT complement(AL163542.8:97856..98028), FT complement(AL163542.8:84836..84971), FT complement(AL163542.8:82040..82174), FT complement(AL163542.8:14013..14164), FT complement(AL163542.8:4185..4332), FT complement(AL163542.8:722..865), FT complement(AL163542.8:157..225), FT complement(72014787..72014824)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-001" FT /standard_name="OTTHUMP00000018493" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: proteins: Sw:P02814 Sw:Q9QYB2 Sw:Q9UI36 FT Tr:P90985 Tr:Q8QHJ0 Tr:Q8QHJ1 Tr:Q8QHJ2 Tr:Q8UUQ4" FT /protein_id="CAI14979.1" FT /translation="MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIG FT PPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGGGSGGGGGSSGNGGGGGGGGGGS FT NCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSS FT SSCGPLPGKPVYSTPSPVENTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLK FT HLVGGLHTVYTKLKRLEITPVVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDC FT TNASSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAI FT AEAMKVKKIKLEAMSNYHASNNQHGADSENGDMNSSVGLELPFMMMPHPLIPVSLPPAS FT VTMAMSQMNHLSTIANMAAAAQVQSPPSRVETSVIKERVPDSPSPAPSLEEGRRPGSHP FT SSHRSSSVSSSPARTESSSDRIPVHQNGLSMNQMLMGLSPNVLPGPKEGDLAGHDMGHE FT SKRMHIEKDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQ FT GLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKE FT KKAKRKLQEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERT FT IQDGRLYLKTTVMY" FT mRNA join(AL139186.16:44499..45352, FT complement(AL138698.15:29874..29989), FT complement(AL163542.8:155572..155733), FT complement(AL163542.8:98434..98589), FT complement(AL163542.8:97856..98028), FT complement(AL163542.8:84836..84971), FT complement(AL163542.8:82040..82174), FT complement(AL163542.8:14013..14164), FT complement(AL163542.8:4185..4332), FT complement(AL163542.8:722..865), FT complement(AL163542.8:157..225), FT complement(72014078..72014824)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-002" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: cDNAs: Em:AF090436 Em:AF102547 Em:AJ005669" FT /note="match: ESTs: Em:AW856344" FT CDS join(AL139186.16:44499..45352, FT complement(AL138698.15:29874..29989), FT complement(AL163542.8:155572..155733), FT complement(AL163542.8:98434..98589), FT complement(AL163542.8:97856..98028), FT complement(AL163542.8:84836..84971), FT complement(AL163542.8:82040..82174), FT complement(AL163542.8:14013..14164), FT complement(AL163542.8:4185..4332), FT complement(AL163542.8:722..865), FT complement(AL163542.8:157..225), FT complement(72014787..72014824)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-002" FT /standard_name="OTTHUMP00000018494" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: proteins: Sw:Q925Q8 Sw:Q96NX9 Sw:Q9QYB2 FT Sw:Q9UI36 Tr:Q8QHJ3 Tr:Q9PTH2" FT /protein_id="CAI14980.1" FT /translation="MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIG FT PPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGGGSGGGGGSSGNGGGGGGGGGGS FT NCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSS FT SSCGPLPGKPVYSTPSPVENTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLK FT HLVGGLHTVYTKLKRLEITPVVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDC FT TNASSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAI FT AEAMKVKKIKLEAMSNYHASNNQHGADSENGDMNSSVGSSDGSWDKETLPSSPSQGPQA FT SITHPRMPGARSLPLSHPLNHLQQSHLLPNGLELPFMMMPHPLIPVSLPPASVTMAMSQ FT MNHLSTIANMAAAAQVQSPPSRVETSVIKERVPDSPSPAPSLEEGRRPGSHPSSHRSSS FT VSSSPARTESSSDRIPVHQNGLSMNQMLMGLSPNVLPGPKEGDLAGHDMGHESKRMHIE FT KDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQGLLKVAI FT DNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKEKKAKRKL FT QEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERTIQDGRLY FT LKTTVMY" FT polyA_site complement(72012098) FT polyA_signal complement(72012113..72012118) FT misc_feature 72020863 FT /note="Clone_right_end: RP11-543G6" FT misc_feature 72049017 FT /note="Clone_left_end: RP11-360I23" FT misc_feature 72049217..72226153 FT /note="annotated region of clone" FT misc_feature 72083223 FT /note="Clone_right_end: RP11-512J14" FT mRNA join(AL139186.16:44076..45352, FT complement(AL138698.15:29874..29989), FT complement(72204688..72204849), FT complement(72146972..72147144), FT complement(72133952..72134087), FT complement(72131156..72131290), FT complement(72063129..72063280), FT complement(72053301..72053448), FT complement(72049838..72049981), FT complement(72049273..72049341), FT complement(AL354995.13:112464..115190)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-001" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: cDNAs: Em:AF090437 Em:AF102546 Em:AF129510 FT Em:AF356492 Em:AF427108 Em:AF427110 Em:AF427472 Em:AJ005670 FT Em:AJ308401 Em:AK001000 Em:AL079278 Em:BC021219" FT /note="match: ESTs: Em:AA219327 Em:AA219450 Em:AA252079 FT Em:AA252130 Em:AA677921 Em:AA911675 Em:AI002524 Em:AI204557 FT Em:AI220096 Em:AI355380 Em:AI375131 Em:AI498677 Em:AI522192 FT Em:AI680922 Em:AI741454 Em:AJ410722 Em:AU118230 Em:AU144853 FT Em:AW592446 Em:AW664022 Em:AW772082 Em:AW856344 Em:BB646272 FT Em:BB665221 Em:BE220048 Em:BE549771 Em:BE666944 Em:BE756347 FT Em:BE831600 Em:BF078676 Em:BF684083 Em:BF685404 Em:BG075820 FT Em:BG337852 Em:BG338090 Em:BG705914 Em:BI767381 Em:BI834727 FT Em:BQ424238 Em:BQ440916 Em:BQ549536 Em:D80570 Em:R11546 FT Em:R19271 Em:T11719" FT CDS join(AL139186.16:44499..45352, FT complement(AL138698.15:29874..29989), FT complement(72204688..72204849), FT complement(72146972..72147144), FT complement(72133952..72134087), FT complement(72131156..72131290), FT complement(72063129..72063280), FT complement(72053301..72053448), FT complement(72049838..72049981), FT complement(72049273..72049341), FT complement(AL354995.13:115153..115190)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-001" FT /standard_name="OTTHUMP00000018493" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: proteins: Sw:P02814 Sw:Q9QYB2 Sw:Q9UI36 FT Tr:P90985 Tr:Q8QHJ0 Tr:Q8QHJ1 Tr:Q8QHJ2 Tr:Q8UUQ4" FT /protein_id="CAH73006.1" FT /translation="MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIG FT PPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGGGSGGGGGSSGNGGGGGGGGGGS FT NCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSS FT SSCGPLPGKPVYSTPSPVENTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLK FT HLVGGLHTVYTKLKRLEITPVVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDC FT TNASSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAI FT AEAMKVKKIKLEAMSNYHASNNQHGADSENGDMNSSVGLELPFMMMPHPLIPVSLPPAS FT VTMAMSQMNHLSTIANMAAAAQVQSPPSRVETSVIKERVPDSPSPAPSLEEGRRPGSHP FT SSHRSSSVSSSPARTESSSDRIPVHQNGLSMNQMLMGLSPNVLPGPKEGDLAGHDMGHE FT SKRMHIEKDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQ FT GLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKE FT KKAKRKLQEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERT FT IQDGRLYLKTTVMY" FT mRNA join(AL139186.16:44499..45352, FT complement(AL138698.15:29874..29989), FT complement(72204688..72204849), FT complement(72147550..72147705), FT complement(72146972..72147144), FT complement(72133952..72134087), FT complement(72131156..72131290), FT complement(72063129..72063280), FT complement(72053301..72053448), FT complement(72049838..72049981), FT complement(72049273..72049341), FT complement(AL354995.13:114444..115190)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-002" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: cDNAs: Em:AF090436 Em:AF102547 Em:AJ005669" FT /note="match: ESTs: Em:AW856344" FT CDS join(AL139186.16:44499..45352, FT complement(AL138698.15:29874..29989), FT complement(72204688..72204849), FT complement(72147550..72147705), FT complement(72146972..72147144), FT complement(72133952..72134087), FT complement(72131156..72131290), FT complement(72063129..72063280), FT complement(72053301..72053448), FT complement(72049838..72049981), FT complement(72049273..72049341), FT complement(AL354995.13:115153..115190)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-002" FT /standard_name="OTTHUMP00000018494" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: proteins: Sw:Q925Q8 Sw:Q96NX9 Sw:Q9QYB2 FT Sw:Q9UI36 Tr:Q8QHJ3 Tr:Q9PTH2" FT /protein_id="CAH73005.1" FT /translation="MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIG FT PPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGGGSGGGGGSSGNGGGGGGGGGGS FT NCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSS FT SSCGPLPGKPVYSTPSPVENTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLK FT HLVGGLHTVYTKLKRLEITPVVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDC FT TNASSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAI FT AEAMKVKKIKLEAMSNYHASNNQHGADSENGDMNSSVGSSDGSWDKETLPSSPSQGPQA FT SITHPRMPGARSLPLSHPLNHLQQSHLLPNGLELPFMMMPHPLIPVSLPPASVTMAMSQ FT MNHLSTIANMAAAAQVQSPPSRVETSVIKERVPDSPSPAPSLEEGRRPGSHPSSHRSSS FT VSSSPARTESSSDRIPVHQNGLSMNQMLMGLSPNVLPGPKEGDLAGHDMGHESKRMHIE FT KDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQGLLKVAI FT DNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKEKKAKRKL FT QEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERTIQDGRLY FT LKTTVMY" FT misc_feature 72226053 FT /note="Clone_right_end: RP11-360I23" FT misc_feature 72226154..72328424 FT /note="annotated region of clone" FT CDS 72249199..>72249601 FT /pseudo FT /locus_tag="RP11-393H6.2-001" FT /product="H3 histone family pseudogene" FT /note="match: proteins: Sw:P84243 Tr:P84244 Tr:Q27880 FT Tr:Q6YP14 Tr:Q8RVQ8 Tr:Q8RVQ9 Tr:Q8S491 Tr:Q9D0H3" FT polyA_signal 72250106..72250111 FT mRNA join(AL139186.16:44076..45352, FT complement(72255927..72256042), FT complement(AL163542.8:155572..155733), FT complement(AL163542.8:97856..98028), FT complement(AL163542.8:84836..84971), FT complement(AL163542.8:82040..82174), FT complement(AL163542.8:14013..14164), FT complement(AL163542.8:4185..4332), FT complement(AL163542.8:722..865), FT complement(AL163542.8:157..225), FT complement(AL354995.13:112464..115190)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-001" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: cDNAs: Em:AF090437 Em:AF102546 Em:AF129510 FT Em:AF356492 Em:AF427108 Em:AF427110 Em:AF427472 Em:AJ005670 FT Em:AJ308401 Em:AK001000 Em:AL079278 Em:BC021219" FT /note="match: ESTs: Em:AA219327 Em:AA219450 Em:AA252079 FT Em:AA252130 Em:AA677921 Em:AA911675 Em:AI002524 Em:AI204557 FT Em:AI220096 Em:AI355380 Em:AI375131 Em:AI498677 Em:AI522192 FT Em:AI680922 Em:AI741454 Em:AJ410722 Em:AU118230 Em:AU144853 FT Em:AW592446 Em:AW664022 Em:AW772082 Em:AW856344 Em:BB646272 FT Em:BB665221 Em:BE220048 Em:BE549771 Em:BE666944 Em:BE756347 FT Em:BE831600 Em:BF078676 Em:BF684083 Em:BF685404 Em:BG075820 FT Em:BG337852 Em:BG338090 Em:BG705914 Em:BI767381 Em:BI834727 FT Em:BQ424238 Em:BQ440916 Em:BQ549536 Em:D80570 Em:R11546 FT Em:R19271 Em:T11719" FT CDS join(AL139186.16:44499..45352, FT complement(72255927..72256042), FT complement(AL163542.8:155572..155733), FT complement(AL163542.8:97856..98028), FT complement(AL163542.8:84836..84971), FT complement(AL163542.8:82040..82174), FT complement(AL163542.8:14013..14164), FT complement(AL163542.8:4185..4332), FT complement(AL163542.8:722..865), FT complement(AL163542.8:157..225), FT complement(AL354995.13:115153..115190)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-001" FT /standard_name="OTTHUMP00000018493" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: proteins: Sw:P02814 Sw:Q9QYB2 Sw:Q9UI36 FT Tr:P90985 Tr:Q8QHJ0 Tr:Q8QHJ1 Tr:Q8QHJ2 Tr:Q8UUQ4" FT /protein_id="CAH73303.1" FT /translation="MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIG FT PPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGGGSGGGGGSSGNGGGGGGGGGGS FT NCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSS FT SSCGPLPGKPVYSTPSPVENTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLK FT HLVGGLHTVYTKLKRLEITPVVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDC FT TNASSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAI FT AEAMKVKKIKLEAMSNYHASNNQHGADSENGDMNSSVGLELPFMMMPHPLIPVSLPPAS FT VTMAMSQMNHLSTIANMAAAAQVQSPPSRVETSVIKERVPDSPSPAPSLEEGRRPGSHP FT SSHRSSSVSSSPARTESSSDRIPVHQNGLSMNQMLMGLSPNVLPGPKEGDLAGHDMGHE FT SKRMHIEKDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQ FT GLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKE FT KKAKRKLQEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERT FT IQDGRLYLKTTVMY" FT mRNA join(AL139186.16:44499..45352, FT complement(72255927..72256042), FT complement(AL163542.8:155572..155733), FT complement(AL163542.8:98434..98589), FT complement(AL163542.8:97856..98028), FT complement(AL163542.8:84836..84971), FT complement(AL163542.8:82040..82174), FT complement(AL163542.8:14013..14164), FT complement(AL163542.8:4185..4332), FT complement(AL163542.8:722..865), FT complement(AL163542.8:157..225), FT complement(AL354995.13:114444..115190)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-002" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: cDNAs: Em:AF090436 Em:AF102547 Em:AJ005669" FT /note="match: ESTs: Em:AW856344" FT CDS join(AL139186.16:44499..45352, FT complement(72255927..72256042), FT complement(AL163542.8:155572..155733), FT complement(AL163542.8:98434..98589), FT complement(AL163542.8:97856..98028), FT complement(AL163542.8:84836..84971), FT complement(AL163542.8:82040..82174), FT complement(AL163542.8:14013..14164), FT complement(AL163542.8:4185..4332), FT complement(AL163542.8:722..865), FT complement(AL163542.8:157..225), FT complement(AL354995.13:115153..115190)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-002" FT /standard_name="OTTHUMP00000018494" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: proteins: Sw:Q925Q8 Sw:Q96NX9 Sw:Q9QYB2 FT Sw:Q9UI36 Tr:Q8QHJ3 Tr:Q9PTH2" FT /protein_id="CAH73304.1" FT /translation="MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIG FT PPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGGGSGGGGGSSGNGGGGGGGGGGS FT NCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSS FT SSCGPLPGKPVYSTPSPVENTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLK FT HLVGGLHTVYTKLKRLEITPVVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDC FT TNASSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAI FT AEAMKVKKIKLEAMSNYHASNNQHGADSENGDMNSSVGSSDGSWDKETLPSSPSQGPQA FT SITHPRMPGARSLPLSHPLNHLQQSHLLPNGLELPFMMMPHPLIPVSLPPASVTMAMSQ FT MNHLSTIANMAAAAQVQSPPSRVETSVIKERVPDSPSPAPSLEEGRRPGSHPSSHRSSS FT VSSSPARTESSSDRIPVHQNGLSMNQMLMGLSPNVLPGPKEGDLAGHDMGHESKRMHIE FT KDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQGLLKVAI FT DNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKEKKAKRKL FT QEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERTIQDGRLY FT LKTTVMY" FT CDS 72278313..72278787 FT /pseudo FT /locus_tag="RP11-393H6.3-001" FT /product="ribosomal protein L21 (RPL21) pseudogene" FT /note="match: proteins: Sw:O09167 Sw:O42706 Sw:P20280 FT Sw:P34334 Sw:P46778 Sw:P46778.2 Sw:P49667 Sw:Q02753 FT Sw:Q12672 Sw:Q43291 Sw:Q9FDZ9 Sw:Q9UUC1 Tr:Q43291 Tr:Q90YU7 FT Tr:Q962T7 Tr:Q9CQM8 Tr:Q9V9M7" FT misc_feature 72293508..72293565 FT /note="Sequece from AC007428, sequenced by WIBR" FT misc_feature 72328225 FT /note="Clone_left_end: RP11-76N11" FT misc_feature complement(72328425..72485405) FT /note="annotated region of clone" FT misc_feature complement(72455021) FT /note="Clone_left_end: RP11-393H6" FT mRNA complement(join(AL354995.13:112464..115190, FT AL163542.8:157..225,AL163542.8:722..865, FT AL163542.8:4185..4332,AL163542.8:14013..14164, FT AL163542.8:82040..82174,AL163542.8:84836..84971, FT AL163542.8:97856..98028,AL163542.8:155572..155733, FT AL138698.15:29874..29989,72440054..72441330)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-001" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: cDNAs: Em:AF090437 Em:AF102546 Em:AF129510 FT Em:AF356492 Em:AF427108 Em:AF427110 Em:AF427472 Em:AJ005670 FT Em:AJ308401 Em:AK001000 Em:AL079278 Em:BC021219" FT /note="match: ESTs: Em:AA219327 Em:AA219450 Em:AA252079 FT Em:AA252130 Em:AA677921 Em:AA911675 Em:AI002524 Em:AI204557 FT Em:AI220096 Em:AI355380 Em:AI375131 Em:AI498677 Em:AI522192 FT Em:AI680922 Em:AI741454 Em:AJ410722 Em:AU118230 Em:AU144853 FT Em:AW592446 Em:AW664022 Em:AW772082 Em:AW856344 Em:BB646272 FT Em:BB665221 Em:BE220048 Em:BE549771 Em:BE666944 Em:BE756347 FT Em:BE831600 Em:BF078676 Em:BF684083 Em:BF685404 Em:BG075820 FT Em:BG337852 Em:BG338090 Em:BG705914 Em:BI767381 Em:BI834727 FT Em:BQ424238 Em:BQ440916 Em:BQ549536 Em:D80570 Em:R11546 FT Em:R19271 Em:T11719" FT CDS complement(join(AL354995.13:115153..115190, FT AL163542.8:157..225,AL163542.8:722..865, FT AL163542.8:4185..4332,AL163542.8:14013..14164, FT AL163542.8:82040..82174,AL163542.8:84836..84971, FT AL163542.8:97856..98028,AL163542.8:155572..155733, FT AL138698.15:29874..29989,72440054..72440907)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-001" FT /standard_name="OTTHUMP00000018493" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: proteins: Sw:P02814 Sw:Q9QYB2 Sw:Q9UI36 FT Tr:P90985 Tr:Q8QHJ0 Tr:Q8QHJ1 Tr:Q8QHJ2 Tr:Q8UUQ4" FT /protein_id="CAI16673.1" FT /translation="MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIG FT PPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGGGSGGGGGSSGNGGGGGGGGGGS FT NCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSS FT SSCGPLPGKPVYSTPSPVENTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLK FT HLVGGLHTVYTKLKRLEITPVVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDC FT TNASSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAI FT AEAMKVKKIKLEAMSNYHASNNQHGADSENGDMNSSVGLELPFMMMPHPLIPVSLPPAS FT VTMAMSQMNHLSTIANMAAAAQVQSPPSRVETSVIKERVPDSPSPAPSLEEGRRPGSHP FT SSHRSSSVSSSPARTESSSDRIPVHQNGLSMNQMLMGLSPNVLPGPKEGDLAGHDMGHE FT SKRMHIEKDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQ FT GLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKE FT KKAKRKLQEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERT FT IQDGRLYLKTTVMY" FT mRNA complement(join(AL354995.13:114444..115190, FT AL163542.8:157..225,AL163542.8:722..865, FT AL163542.8:4185..4332,AL163542.8:14013..14164, FT AL163542.8:82040..82174,AL163542.8:84836..84971, FT AL163542.8:97856..98028,AL163542.8:98434..98589, FT AL163542.8:155572..155733,AL138698.15:29874..29989, FT 72440054..72440907)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-002" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: cDNAs: Em:AF090436 Em:AF102547 Em:AJ005669" FT /note="match: ESTs: Em:AW856344" FT CDS complement(join(AL354995.13:115153..115190, FT AL163542.8:157..225,AL163542.8:722..865, FT AL163542.8:4185..4332,AL163542.8:14013..14164, FT AL163542.8:82040..82174,AL163542.8:84836..84971, FT AL163542.8:97856..98028,AL163542.8:98434..98589, FT AL163542.8:155572..155733,AL138698.15:29874..29989, FT 72440054..72440907)) FT /gene="DACH1" FT /locus_tag="RP11-512J14.1-002" FT /standard_name="OTTHUMP00000018494" FT /product="dachshund homolog 1 (Drosophila)" FT /note="match: proteins: Sw:Q925Q8 Sw:Q96NX9 Sw:Q9QYB2 FT Sw:Q9UI36 Tr:Q8QHJ3 Tr:Q9PTH2" FT /protein_id="CAC12840.2" FT /translation="MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIG FT PPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGGGSGGGGGSSGNGGGGGGGGGGS FT NCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSS FT SSCGPLPGKPVYSTPSPVENTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLK FT HLVGGLHTVYTKLKRLEITPVVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDC FT TNASSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAI FT AEAMKVKKIKLEAMSNYHASNNQHGADSENGDMNSSVGSSDGSWDKETLPSSPSQGPQA FT SITHPRMPGARSLPLSHPLNHLQQSHLLPNGLELPFMMMPHPLIPVSLPPASVTMAMSQ FT MNHLSTIANMAAAAQVQSPPSRVETSVIKERVPDSPSPAPSLEEGRRPGSHPSSHRSSS FT VSSSPARTESSSDRIPVHQNGLSMNQMLMGLSPNVLPGPKEGDLAGHDMGHESKRMHIE FT KDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQGLLKVAI FT DNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKEKKAKRKL FT QEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERTIQDGRLY FT LKTTVMY" FT CDS 72420113..72420449 FT /pseudo FT /locus_tag="RP11-76N11.2-001" FT /product="ribosomal protein L35 (RPL35) pseudogene" FT /note="match: proteins: Sw:O55142 Sw:P02434 Sw:P04646 FT Sw:P18077 Sw:P41056 Sw:P49180" FT misc_feature complement(72378492..72378565) FT /note="Single clone region. Assembly consistent with FT restriction digest" FT misc_feature complement(72373445..72373577) FT /note="Tandem repeat. Contains single clone region. FT Assembly consistent with restriction digest" FT misc_feature complement(72328425) FT /note="Clone_left_end: RP11-76N11" FT misc_feature 72485406..72640031 FT /note="annotated region of clone" FT CDS complement(72487878..72488316) FT /pseudo FT /locus_tag="RP11-117N4.1-001" FT /product="ribosomal protein S10 (RPS10) pseudogene" FT /note="match: proteins: Sw:O77302 Sw:P30427 Sw:P46783 FT Sw:P46784 Sw:P63326 Sw:Q07254 Sw:Q08745 Sw:Q90YR4 Sw:Q962R9 FT Sw:Q9QXS1 Sw:Q9VB14 Sw:Q9VWG3 Sw:Q9VWG3 Tr:P63325 FT Tr:Q9NQ39" FT misc_feature 72639832 FT /note="Clone_left_end: RP11-14B2" FT misc_feature complement(72692925) FT /note="Clone_right_end: RP11-490G20" FT misc_feature complement(72640032) FT /note="Clone_left_end: RP11-14B2" FT misc_feature 72830031 FT /note="Clone_left_end: RP11-339I10" FT misc_feature 72948093 FT /note="Clone_right_end: RP11-490G20" FT misc_feature 72976125 FT /note="Clone_left_end: RP11-335N6" FT misc_feature 73006476 FT /note="Clone_right_end: RP11-339I10" FT misc_feature 73006577..73115985 FT /note="annotated region of clone" FT polyA_signal complement(73034223..73034228) FT CDS complement(73034272..73034467) FT /pseudo FT /locus_tag="RP11-335N6.1-001" FT /product="pseudogene similar to part of ribosomal protein FT L18A RPL18A" FT /note="match: proteins: Sw:O57561 Sw:P62717 Sw:P62718 FT Sw:Q02543 Sw:Q90YU9 Tr:Q76N54" FT misc_feature 73115786 FT /note="Clone_left_end: RP11-11C5" FT misc_feature 73115986..73285773 FT /note="annotated region of clone" FT misc_feature 73123041..73123219 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC clone. FT Restriction digest data confirm the assembly" FT mRNA complement(join(73282495..73284483,AL138695.13:7417..7562, FT AL138695.13:15989..16152)) FT /gene="C13orf37" FT /locus_tag="RP11-11C5.2-001" FT /product="chromosome 13 open reading frame 37" FT /note="match: cDNAs: Em:AK025522 Em:BC013405" FT /note="match: ESTs: Em:AA233472.1 Em:AA314637.1 FT Em:AA736434.1 Em:AI587281.1 Em:AI885466.1 Em:AL711005.1 FT Em:AW136776.1 Em:BF686681.1 Em:BG699590.1 Em:BG700480.1 FT Em:BG708199.1 Em:BM912987.1 Em:BM998447.1" FT CDS complement(join(73284460..73284483,AL138695.13:7417..7562, FT AL138695.13:15989..16067)) FT /gene="C13orf37" FT /locus_tag="RP11-11C5.2-001" FT /standard_name="OTTHUMP00000018497" FT /product="chromosome 13 open reading frame 37" FT /protein_id="CAH70226.1" FT /translation="MASSSGAGAAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLS FT ICVRLCEQGINPEALSSVIKELRKATEALKAAENMTS" FT misc_feature 73167322 FT /note="Clone_right_end: RP11-335N6" FT misc_feature 73244296 FT /note="Clone_left_end: RP11-342J4" FT CDS 73277831..73278276 FT /pseudo FT /locus_tag="RP11-11C5.1-001" FT /product="60S ribosomal protein L21 (RPL21) pseudogene" FT /note="match: proteins: Sw:O09167 Sw:O42706 Sw:P46778 FT Sw:P49666 Sw:Q9UUC1 Tr:Q9CQM8 Tr:Q9V9M7" FT polyA_site complement(73282495) FT polyA_site complement(73282505) FT polyA_signal complement(73282520..73282525) FT polyA_site complement(73283547) FT polyA_signal complement(73283572..73283577) FT polyA_site complement(73283632) FT polyA_signal complement(73283657..73283662) FT misc_feature 73285673 FT /note="Clone_right_end: RP11-11C5" FT misc_feature 73285774..73353946 FT /note="annotated region of clone" FT mRNA complement(join(73329540..73334016,73334667..73334789, FT 73335501..73335659,73335784..73335952,73336061..73336275, FT 73337589..73337745,73340110..73340196,73342923..73343050, FT 73345042..73345126,73345219..73345283,73345933..73346034, FT 73346297..73346413,73346831..73346977,73347822..73347959, FT 73348084..73348197,73349349..73349513,73350063..73350230, FT 73351558..73351631,73352325..73352518, FT AL391384.18:1138..1295,AL391384.18:1897..2225)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-001" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /note="match: ESTs: Em:AA744619.1 Em:AI191776.1 FT Em:BM972526.1 Em:BQ015124.1 Em:BQ020607.1 Em:BU675171.1 FT Em:BU684726.1" FT /note="match: cDNAs: Em:AF330044.1 Em:AL832266.1 FT Em:BC056143.1" FT CDS complement(join(73333933..73334016,73334667..73334789, FT 73335501..73335659,73335784..73335952,73336061..73336275, FT 73337589..73337745,73340110..73340196,73342923..73343050, FT 73345042..73345126,73345219..73345283,73345933..73346034, FT 73346297..73346413,73346831..73346977,73347822..73347959, FT 73348084..73348197,73349349..73349513,73350063..73350230, FT 73351558..73351631,73352325..73352518, FT AL391384.18:1138..1295,AL391384.18:1897..2124)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-001" FT /standard_name="OTTHUMP00000018498" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /note="match: proteins: Sw:Q9Y2L1.2" FT /protein_id="CAH72709.1" FT /translation="MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEG FT PALEPQPQDPASSVCPQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAP FT VYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKM FT SADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLACLSEEGNEIE FT SGKIIFSEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWIHGDNEENKEIILQGLK FT HLNRAVHEDIVAVELLPKSQWVAPSSVVLHDEGQNEEDVEKEEETERMLKTAVSEKMLK FT PTGRVVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASTLEGRRII FT VAIDGWPRNSRYPNGHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWS FT ITEKDMKNREDLRHLCICSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGN FT ALDQESARRGTTVYLCEKRIDMVPELLSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTK FT FTKSVINSKASLTYAEAQLRIDSANMNDDITTSLRGLNKLAKILKKRRIEKGALTLSSP FT EVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAP FT PPSNYEILVKAARSRNLEIKTDTAKSLAESLDQAESPTFPYLNTLLRILATRCMMQAVY FT FCSGMDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELTDKHKLAD FT ICKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAIVVLIPKYGLEG FT TVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFDKVKVKIMLDSSNLQHQKIRMSLVEP FT QIPGISIPTDTSNMDLNGPKKKKMKLGK" FT mRNA complement(join(73331581..73334016,73334667..73334789, FT 73335501..73335659,73335784..73335952,73336061..73336275, FT 73337589..73337745,73340110..73340196,73342923..73343050, FT 73345042..73345126,73345219..73345283,73345933..73346034, FT 73346297..73346413,73346831..73346977,73347822..73347959, FT 73348084..73348197,73349349..73349513,73350063..73350230, FT 73351558..73351631,73352325..73352518, FT AL391384.18:1581..1648,AL391384.18:1897..2217)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-002" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /note="match: ESTs: Em:AW953508.1 Em:BQ228050.1" FT /note="match: cDNAs: Em:AB023225.1" FT CDS complement(join(73333933..73334016,73334667..73334789, FT 73335501..73335659,73335784..73335952,73336061..73336275, FT 73337589..73337745,73340110..73340196,73342923..73343050, FT 73345042..73345126,73345219..73345283,73345933..73346034, FT 73346297..73346413,73346831..73346977,73347822..73347959, FT 73348084..73348197,73349349..73349513,73350063..73350230, FT 73351558..73351631,73352325..73352518, FT AL391384.18:1581..1648,AL391384.18:1897..2124)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-002" FT /standard_name="OTTHUMP00000018499" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /protein_id="CAH72708.1" FT /translation="MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEG FT PALEPQPQDPASSVCPQPHYLLPDTNVLLHQIVSAWRPGTWASVASSLRLPGSLETYVE FT QEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFT FT CEEYVKSLTANPELIDRLACLSEEGNEIESGKIIFSEHLPLSKLQQGIKSGTYLQGTFR FT ASRENYLEATVWIHGDNEENKEIILQGLKHLNRAVHEDIVAVELLPKSQWVAPSSVVLH FT DEGQNEEDVEKEEETERMLKTAVSEKMLKPTGRVVGIIKRNWRPYCGMLSKSDIKESRR FT HLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETE FT TEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGCTDIDD FT ALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSN FT LCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRIDSANMNDDI FT TTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEE FT FMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVKAARSRNLEIKTDTAKSLAES FT LDQAESPTFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIRRYA FT DVIVHRLLAVAIGADCTYPELTDKHKLADICKNLNFRHKMAQYAQRASVAFHTQLFFKS FT KGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVF FT HVFDKVKVKIMLDSSNLQHQKIRMSLVEPQIPGISIPTDTSNMDLNGPKKKKMKLGK" FT mRNA complement(join(73333813..73334016,73334667..73334789, FT 73335501..73335659,73335784..73335952,73336061..73336275, FT 73337589..73337745,73340110..73340196,73342923..73343050, FT 73345219..73345283,73345933..73346034,73346297..73346413, FT 73346831..73346977,73347822..73347959,73348084..73348197, FT 73349349..73349513,73350063..73350230,73351558..73351631, FT 73352325..73352518,AL391384.18:1138..1295, FT AL391384.18:1897..2146)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-003" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /note="match: ESTs: Em:BQ101641.1" FT /note="match: cDNAs: Em:BC027357.1" FT mRNA complement(join(AL356754.18:166610..168598, FT 73293090..73293235,73301662..73301825)) FT /gene="C13orf37" FT /locus_tag="RP11-11C5.2-001" FT /product="chromosome 13 open reading frame 37" FT /note="match: ESTs: Em:AA233472.1 Em:AA314637.1 FT Em:AA736434.1 Em:AI587281.1 Em:AI885466.1 Em:AL711005.1 FT Em:AW136776.1 Em:BF686681.1 Em:BG699590.1 Em:BG700480.1 FT Em:BG708199.1 Em:BM912987.1 Em:BM998447.1" FT /note="match: cDNAs: Em:AK025522 Em:BC013405" FT CDS complement(join(AL356754.18:168575..168598, FT 73293090..73293235,73301662..73301740)) FT /gene="C13orf37" FT /locus_tag="RP11-11C5.2-001" FT /standard_name="OTTHUMP00000018497" FT /product="chromosome 13 open reading frame 37" FT /protein_id="CAH72711.1" FT /translation="MASSSGAGAAAAAAAANLNAVRETMDVLLEISRILNTGLDMETLS FT ICVRLCEQGINPEALSSVIKELRKATEALKAAENMTS" FT mRNA join(<73302061..73302145,73305419..73305525, FT 73309098..73309143,73312100..73312181,73317675..73317740, FT 73318643..73318699,73319119..>73319317) FT /gene="C13orf34" FT /locus_tag="RP11-342J4.2-002" FT /product="chromosome 13 open reading frame 34" FT /note="match: ESTs: Em:BM763113.1" FT CDS join(<73302061..73302145,73305419..73305525, FT 73309098..73309143,73312100..73312181,73317675..73317740, FT 73318643..73318699,73319119..>73319317) FT /codon_start=2 FT /gene="C13orf34" FT /locus_tag="RP11-342J4.2-002" FT /standard_name="OTTHUMP00000018496" FT /product="chromosome 13 open reading frame 34" FT /protein_id="CAH72713.1" FT /translation="KSLCLSWKLAWPPELPGVGTGGFVLYAPTPGKFRWSIDQLAVINP FT VEIDPEDIHRQALYLSHSRIDKDVEDKRQKAIEEFFTKDVIVPSPWTDHEGKQLSQCHS FT SKCTNINSDSPVGKKLTIHSEKSDAACQTLLSLPVDFNLENILGDYFRADEFADQSPGN FT LSSSSLRRKLFLDGNGSISDSLPSASPGSPHSGVQTSLEMFYSIDLSPVK" FT mRNA join(73302063..73302145,73303064..73303231, FT 73309098..73309143,73312100..73312181,73317675..73317740, FT 73318643..73318699,73319119..73319183) FT /gene="C13orf34" FT /locus_tag="RP11-342J4.2-004" FT /product="chromosome 13 open reading frame 34" FT /note="match: ESTs: Em:BE566940.1 Em:BM763444.1" FT mRNA join(73302064..73302145,73303064..73303231, FT 73305419..73305525,73309098..73309143,73312100..73312181, FT 73317675..73317740,73318643..73318699,73319119..73319345, FT 73320082..73320214,73320639..73321249,73327828..73327959, FT 73329289..73330318) FT /gene="C13orf34" FT /locus_tag="RP11-342J4.2-001" FT /product="chromosome 13 open reading frame 34" FT /note="match: ESTs: Em:BU619450.1 Em:CF529405.1" FT /note="match: cDNAs: Em:BC025367.2 Em:BC056876.1" FT mRNA join(73302066..73302145,73303064..73303231, FT 73305419..73305525,73312100..73312181,73317675..73317740, FT 73318643..73318699,73319119..73319274) FT /gene="C13orf34" FT /locus_tag="RP11-342J4.2-003" FT /product="chromosome 13 open reading frame 34" FT /note="match: ESTs: Em:BE564722.1 Em:BM147252.1" FT CDS join(73303079..73303231,73305419..73305525, FT 73309098..73309143,73312100..73312181,73317675..73317740, FT 73318643..73318699,73319119..73319345,73320082..73320214, FT 73320639..73321249,73327828..73327959,73329289..73329354) FT /gene="C13orf34" FT /locus_tag="RP11-342J4.2-001" FT /standard_name="OTTHUMP00000018495" FT /product="chromosome 13 open reading frame 34" FT /note="match: proteins: Sw:Q6PGQ7.2" FT /protein_id="CAH72712.2" FT /translation="MGDVKESKMQITPETPGRIPVLNPFESPSDYSNLHEQTLASPSVF FT KSTKLPTPGKFRWSIDQLAVINPVEIDPEDIHRQALYLSHSRIDKDVEDKRQKAIEEFF FT TKDVIVPSPWTDHEGKQLSQCHSSKCTNINSDSPVGKKLTIHSEKSDAACQTLLSLPVD FT FNLENILGDYFRADEFADQSPGNLSSSSLRRKLFLDGNGSISDSLPSASPGSPHSGVQT FT SLEMFYSIDLSPVKCRSPLQTPSSGQFSSSPIQASAKKYSLGSITSPSPISSPTFSPIE FT FQIGETPLSEQRKFTVHSPDASSGTNSNGITNPCIRSPYIDGCSPIKNWSPMRLQMYSG FT GTQYRTSVIQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLRQFSNEASTHGTHL FT VVTAMSVTQNQSSASEKELALLQDVEREKDNNTVDMVDPIEIADETTWIKEPVDNGSLP FT MTDFVSGIAFSIENSHMCMSPLAESSVIPCESSNIQMDSGYNTQNCGSNIMDTVGAESY FT CKESDAQTCEVESKSQAFNMKQDHTTQRCWMKTASPFQCSSP" FT polyA_site complement(73329540) FT polyA_signal complement(73329555..73329560) FT polyA_signal 73329568..73329573 FT polyA_site 73329587 FT polyA_signal 73330314..73330319 FT polyA_site 73330336 FT polyA_site complement(73332533) FT polyA_site complement(73333092) FT polyA_signal complement(73333093..73333098) FT polyA_signal complement(73333111..73333116) FT polyA_site complement(73333179) FT polyA_signal complement(73333205..73333210) FT mRNA complement(join(73333179..73333265,73345992..73346034, FT 73346297..73346413,73346831..73346977,73347822..73347908)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-005" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /note="match: ESTs: Em:AI160600.1" FT misc_feature 73353747 FT /note="Clone_left_end: RP11-555G22" FT misc_feature 73353947..73509116 FT /note="annotated region of clone" FT mRNA complement(join(73354984..73355141,73355427..73355494, FT 73355743..73356232)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-004" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /note="match: ESTs: Em:BB631774.1 Em:BG722881.1" FT mRNA complement(join(AL138695.13:43867..48343, FT AL138695.13:48994..49116,AL138695.13:49828..49986, FT AL138695.13:50111..50279,AL138695.13:50388..50602, FT AL138695.13:51916..52072,AL138695.13:54437..54523, FT AL138695.13:57250..57377,AL138695.13:59369..59453, FT AL138695.13:59546..59610,AL138695.13:60260..60361, FT AL138695.13:60624..60740,AL138695.13:61158..61304, FT AL138695.13:62149..62286,AL138695.13:62411..62524, FT AL138695.13:63676..63840,AL138695.13:64390..64557, FT AL138695.13:65885..65958,AL138695.13:66652..66845, FT 73354984..73355141,73355743..73356071)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-001" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /note="match: cDNAs: Em:AF330044.1 Em:AL832266.1 FT Em:BC056143.1" FT /note="match: ESTs: Em:AA744619.1 Em:AI191776.1 FT Em:BM972526.1 Em:BQ015124.1 Em:BQ020607.1 Em:BU675171.1 FT Em:BU684726.1" FT CDS complement(join(AL138695.13:48260..48343, FT AL138695.13:48994..49116,AL138695.13:49828..49986, FT AL138695.13:50111..50279,AL138695.13:50388..50602, FT AL138695.13:51916..52072,AL138695.13:54437..54523, FT AL138695.13:57250..57377,AL138695.13:59369..59453, FT AL138695.13:59546..59610,AL138695.13:60260..60361, FT AL138695.13:60624..60740,AL138695.13:61158..61304, FT AL138695.13:62149..62286,AL138695.13:62411..62524, FT AL138695.13:63676..63840,AL138695.13:64390..64557, FT AL138695.13:65885..65958,AL138695.13:66652..66845, FT 73354984..73355141,73355743..73355970)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-001" FT /standard_name="OTTHUMP00000018498" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /note="match: proteins: Sw:Q9Y2L1.2" FT /protein_id="CAI15670.1" FT /translation="MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEG FT PALEPQPQDPASSVCPQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAP FT VYKRIRDVTNNQEKHFYTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKWYNEHLKKM FT SADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLACLSEEGNEIE FT SGKIIFSEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWIHGDNEENKEIILQGLK FT HLNRAVHEDIVAVELLPKSQWVAPSSVVLHDEGQNEEDVEKEEETERMLKTAVSEKMLK FT PTGRVVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASTLEGRRII FT VAIDGWPRNSRYPNGHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWS FT ITEKDMKNREDLRHLCICSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGN FT ALDQESARRGTTVYLCEKRIDMVPELLSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTK FT FTKSVINSKASLTYAEAQLRIDSANMNDDITTSLRGLNKLAKILKKRRIEKGALTLSSP FT EVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAP FT PPSNYEILVKAARSRNLEIKTDTAKSLAESLDQAESPTFPYLNTLLRILATRCMMQAVY FT FCSGMDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELTDKHKLAD FT ICKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAIVVLIPKYGLEG FT TVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFDKVKVKIMLDSSNLQHQKIRMSLVEP FT QIPGISIPTDTSNMDLNGPKKKKMKLGK" FT mRNA complement(join(AL138695.13:45908..48343, FT AL138695.13:48994..49116,AL138695.13:49828..49986, FT AL138695.13:50111..50279,AL138695.13:50388..50602, FT AL138695.13:51916..52072,AL138695.13:54437..54523, FT AL138695.13:57250..57377,AL138695.13:59369..59453, FT AL138695.13:59546..59610,AL138695.13:60260..60361, FT AL138695.13:60624..60740,AL138695.13:61158..61304, FT AL138695.13:62149..62286,AL138695.13:62411..62524, FT AL138695.13:63676..63840,AL138695.13:64390..64557, FT AL138695.13:65885..65958,AL138695.13:66652..66845, FT 73355427..73355494,73355743..73356063)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-002" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /note="match: cDNAs: Em:AB023225.1" FT /note="match: ESTs: Em:AW953508.1 Em:BQ228050.1" FT CDS complement(join(AL138695.13:48260..48343, FT AL138695.13:48994..49116,AL138695.13:49828..49986, FT AL138695.13:50111..50279,AL138695.13:50388..50602, FT AL138695.13:51916..52072,AL138695.13:54437..54523, FT AL138695.13:57250..57377,AL138695.13:59369..59453, FT AL138695.13:59546..59610,AL138695.13:60260..60361, FT AL138695.13:60624..60740,AL138695.13:61158..61304, FT AL138695.13:62149..62286,AL138695.13:62411..62524, FT AL138695.13:63676..63840,AL138695.13:64390..64557, FT AL138695.13:65885..65958,AL138695.13:66652..66845, FT 73355427..73355494,73355743..73355970)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-002" FT /standard_name="OTTHUMP00000018499" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /protein_id="CAI15671.1" FT /translation="MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEG FT PALEPQPQDPASSVCPQPHYLLPDTNVLLHQIVSAWRPGTWASVASSLRLPGSLETYVE FT QEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIEEGIPAFT FT CEEYVKSLTANPELIDRLACLSEEGNEIESGKIIFSEHLPLSKLQQGIKSGTYLQGTFR FT ASRENYLEATVWIHGDNEENKEIILQGLKHLNRAVHEDIVAVELLPKSQWVAPSSVVLH FT DEGQNEEDVEKEEETERMLKTAVSEKMLKPTGRVVGIIKRNWRPYCGMLSKSDIKESRR FT HLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETE FT TEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGCTDIDD FT ALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSN FT LCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRIDSANMNDDI FT TTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEE FT FMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVKAARSRNLEIKTDTAKSLAES FT LDQAESPTFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIRRYA FT DVIVHRLLAVAIGADCTYPELTDKHKLADICKNLNFRHKMAQYAQRASVAFHTQLFFKS FT KGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVF FT HVFDKVKVKIMLDSSNLQHQKIRMSLVEPQIPGISIPTDTSNMDLNGPKKKKMKLGK" FT mRNA complement(join(AL138695.13:48140..48343, FT AL138695.13:48994..49116,AL138695.13:49828..49986, FT AL138695.13:50111..50279,AL138695.13:50388..50602, FT AL138695.13:51916..52072,AL138695.13:54437..54523, FT AL138695.13:57250..57377,AL138695.13:59546..59610, FT AL138695.13:60260..60361,AL138695.13:60624..60740, FT AL138695.13:61158..61304,AL138695.13:62149..62286, FT AL138695.13:62411..62524,AL138695.13:63676..63840, FT AL138695.13:64390..64557,AL138695.13:65885..65958, FT AL138695.13:66652..66845,73354984..73355141, FT 73355743..73355992)) FT /gene="DIS3" FT /locus_tag="RP11-342J4.3-003" FT /product="DIS3 mitotic control homolog (S. cerevisiae)" FT /note="match: cDNAs: Em:BC027357.1" FT /note="match: ESTs: Em:BQ101641.1" FT mRNA join(73356197..73356487,73357561..73357859, FT 73366585..73366685,73369497..73369695,73372045..73372164, FT 73395987..73396120,73401148..73401256,73401871..73402052, FT 73409381..73409506,73428195..73428293,73467922..73468087, FT 73482669..73482819,73491214..73491304,73505303..73505405, FT AL354720.14:30396..30526,AL354720.14:38713..38797, FT AL354720.14:63944..64117,AL354720.14:80991..81575) FT /gene="PIBF1" FT /locus_tag="RP11-505F3.1-001" FT /product="progesterone immunomodulatory binding factor 1" FT /note="match: cDNAs: Em:AF330046.1" FT /note="match: ESTs: Em:AA099685 Em:AA251594 Em:AA307364 FT Em:AA518481 Em:AA806027 Em:AI014561 Em:AI126269 Em:AI222385 FT Em:AI614246 Em:AI741044 Em:AI809069 Em:AI990811 Em:AL361753 FT Em:AU067230 Em:AV688870 Em:AV689008 Em:AV690499 Em:AV692217 FT Em:AV694517 Em:AV703156 Em:AW085186 Em:AW169084 Em:AW273347 FT Em:AW464399 Em:AW769371 Em:AW793587 Em:AW978222 Em:BB471565 FT Em:BE165549 Em:BF218163 Em:D31319 Em:N27300 Em:N40036 FT Em:N77149" FT mRNA join(73356292..73356487,73366585..73366685, FT 73369497..73369695,73372045..73372164) FT /gene="PIBF1" FT /locus_tag="RP11-505F3.1-002" FT /product="progesterone immunomodulatory binding factor 1" FT /note="match: ESTs: Em:BG615126.1" FT CDS join(73357608..73357859,73366585..73366685, FT 73369497..73369695,73372045..73372164,73395987..73396120, FT 73401148..73401256,73401871..73402052,73409381..73409506, FT 73428195..73428293,73467922..73468087,73482669..73482819, FT 73491214..73491304,73505303..73505405, FT AL354720.14:30396..30526,AL354720.14:38713..38797, FT AL354720.14:63944..64117,AL354720.14:80991..81041) FT /gene="PIBF1" FT /locus_tag="RP11-505F3.1-001" FT /standard_name="OTTHUMP00000018501" FT /product="progesterone immunomodulatory binding factor 1" FT /note="match: proteins: Sw:Q8WXW3" FT /protein_id="CAI15673.1" FT /translation="MSRKISKESKKVNISSSLESEDISLETTVPTDDISSSEEREGKVR FT ITRQLIERKELLHNIQLLKIELSQKTMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTL FT RLDNQLAFQQKDASKYQELMKQEMETILLRQKQLEETNLQLREKAGDVRRNLRDFELTE FT EQYIKLKAFPEDQLSIPEYVSVRFYELVNPLRKEICELQVKKNILAEELSTNKNQLKQL FT TETYEEDRKNYSEVQIRCQRLALELADTKQLIQQGDYRQENYDKVKSERDALEQEVIEL FT RRKHEILEASHMIQTKERSELSKEVVTLEQTVTLLQKDKEYLNRQNMELSVRCAHEEDR FT LERLQAQLEESKKAREEMYEKYVASRDHYKTEYENKLHDELEQIRLKTNQEIDQLRNAS FT REMYERENRNLREARDNAVAEKERAVMAEKDALEKHDQLLDRYRELQLSTESKVTEFLH FT QSKLKSFESERVQLLQEETARNLTQCQLECEKYQKKLEVLTKEFYSLQASSEKRITELQ FT AQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERVLFSYGYGANVPTTAKRRLKQ FT SVHLARRVLQLEKQNSLILKDLEHRKDQVTQLSQELDRANSLLNQTQQPYRYLIESVRQ FT RDSKIDSLTESIAQLEKDVSNLNKEKSALLQTKNQMALDLEQLLNHREELAAMKQILVK FT MHSKHSENSLLLTKTEPKHVTENQKSKTLNVPKEHEDNIFTPKPTLFTKKEAPEWSKKQ FT KMKT" FT mRNA join(73372047..73372164,73395987..73396120, FT 73401148..73401256,73409381..73409414) FT /gene="PIBF1" FT /locus_tag="RP11-505F3.1-003" FT /product="progesterone immunomodulatory binding factor 1" FT /note="match: ESTs: Em:BG198883.1" FT misc_feature 73391086 FT /note="Clone_right_end: RP11-342J4" FT mRNA join(73458582..73458809,73467922..73468009) FT /gene="PIBF1" FT /locus_tag="RP11-505F3.1-004" FT /product="progesterone immunomodulatory binding factor 1" FT /note="match: ESTs: Em:BG943946.1" FT misc_feature 73508917 FT /note="Clone_left_end: RP11-505F3" FT misc_feature 73509117..73708898 FT /note="annotated region of clone" FT mRNA join(AL391384.18:2351..2641,AL391384.18:3715..4013, FT AL391384.18:12739..12839,AL391384.18:15651..15849, FT AL391384.18:18199..18318,AL391384.18:42141..42274, FT AL391384.18:47302..47410,AL391384.18:48025..48206, FT AL391384.18:55535..55660,AL391384.18:74349..74447, FT AL391384.18:114076..114241,AL391384.18:128823..128973, FT AL391384.18:137368..137458,AL391384.18:151457..151559, FT 73539412..73539542,73547729..73547813,73572960..73573133, FT 73590007..73590591) FT /gene="PIBF1" FT /locus_tag="RP11-505F3.1-001" FT /product="progesterone immunomodulatory binding factor 1" FT /note="match: ESTs: Em:AA099685 Em:AA251594 Em:AA307364 FT Em:AA518481 Em:AA806027 Em:AI014561 Em:AI126269 Em:AI222385 FT Em:AI614246 Em:AI741044 Em:AI809069 Em:AI990811 Em:AL361753 FT Em:AU067230 Em:AV688870 Em:AV689008 Em:AV690499 Em:AV692217 FT Em:AV694517 Em:AV703156 Em:AW085186 Em:AW169084 Em:AW273347 FT Em:AW464399 Em:AW769371 Em:AW793587 Em:AW978222 Em:BB471565 FT Em:BE165549 Em:BF218163 Em:D31319 Em:N27300 Em:N40036 FT Em:N77149" FT /note="match: cDNAs: Em:AF330046.1" FT CDS join(AL391384.18:3762..4013,AL391384.18:12739..12839, FT AL391384.18:15651..15849,AL391384.18:18199..18318, FT AL391384.18:42141..42274,AL391384.18:47302..47410, FT AL391384.18:48025..48206,AL391384.18:55535..55660, FT AL391384.18:74349..74447,AL391384.18:114076..114241, FT AL391384.18:128823..128973,AL391384.18:137368..137458, FT AL391384.18:151457..151559,73539412..73539542, FT 73547729..73547813,73572960..73573133,73590007..73590057) FT /gene="PIBF1" FT /locus_tag="RP11-505F3.1-001" FT /standard_name="OTTHUMP00000018501" FT /product="progesterone immunomodulatory binding factor 1" FT /note="match: proteins: Sw:Q8WXW3" FT /protein_id="CAI14869.1" FT /translation="MSRKISKESKKVNISSSLESEDISLETTVPTDDISSSEEREGKVR FT ITRQLIERKELLHNIQLLKIELSQKTMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTL FT RLDNQLAFQQKDASKYQELMKQEMETILLRQKQLEETNLQLREKAGDVRRNLRDFELTE FT EQYIKLKAFPEDQLSIPEYVSVRFYELVNPLRKEICELQVKKNILAEELSTNKNQLKQL FT TETYEEDRKNYSEVQIRCQRLALELADTKQLIQQGDYRQENYDKVKSERDALEQEVIEL FT RRKHEILEASHMIQTKERSELSKEVVTLEQTVTLLQKDKEYLNRQNMELSVRCAHEEDR FT LERLQAQLEESKKAREEMYEKYVASRDHYKTEYENKLHDELEQIRLKTNQEIDQLRNAS FT REMYERENRNLREARDNAVAEKERAVMAEKDALEKHDQLLDRYRELQLSTESKVTEFLH FT QSKLKSFESERVQLLQEETARNLTQCQLECEKYQKKLEVLTKEFYSLQASSEKRITELQ FT AQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERVLFSYGYGANVPTTAKRRLKQ FT SVHLARRVLQLEKQNSLILKDLEHRKDQVTQLSQELDRANSLLNQTQQPYRYLIESVRQ FT RDSKIDSLTESIAQLEKDVSNLNKEKSALLQTKNQMALDLEQLLNHREELAAMKQILVK FT MHSKHSENSLLLTKTEPKHVTENQKSKTLNVPKEHEDNIFTPKPTLFTKKEAPEWSKKQ FT KMKT" FT mRNA join(73543741..73543764,73544691..73544846, FT 73547729..73547813,73572960..73573133,73590007..73590199) FT /gene="PIBF1" FT /locus_tag="RP11-505F3.1-005" FT /product="progesterone immunomodulatory binding factor 1" FT /note="match: ESTs: Em:BQ441214.1" FT mRNA join(73543777..73543891,73547729..73547813, FT 73572960..73573133,73590007..73590206) FT /gene="PIBF1" FT /locus_tag="RP11-505F3.1-006" FT /product="progesterone immunomodulatory binding factor 1" FT /note="match: ESTs: Em:BQ429782.1" FT polyA_signal 73590260..73590265 FT polyA_site 73590285 FT polyA_signal 73590554..73590559 FT polyA_site 73590592 FT polyA_site 73590599 FT CDS 73610539..73610986 FT /pseudo FT /locus_tag="RP11-505F3.2-001" FT /product="proteasome (prosome, macropain) 26S subunit, FT non-ATPase, 10 (PSMD10) pseudogene." FT /note="match: proteins: Sw:O75832 Sw:Q9Z2X2 Sw:Q9Z2X3 FT Tr:Q9D383" FT mRNA join(73629114..73629296,73635999..73636799) FT /gene="KLF5" FT /locus_tag="RP11-505F3.5-002" FT /product="Kruppel-like factor 5 (intestinal)" FT /note="match: ESTs: Em:BG717197.1 Em:BG723451.1 FT Em:BG772529.1 Em:BI465189.1 Em:BI560425.1 Em:BI825687.1 FT Em:BI826585.1" FT mRNA join(73632930..73633726,73635999..73636872, FT 73637962..73638021,73649846..73651676) FT /gene="KLF5" FT /locus_tag="RP11-505F3.5-001" FT /product="Kruppel-like factor 5 (intestinal)" FT /note="match: ESTs: Em:AW262708.1 Em:BM142461.1 FT Em:BM982025.1 Em:BQ015830.1 Em:CB851096.1 Em:CK820215.1 FT Em:CN478829.1" FT /note="match: cDNAs: Em:AB030824.1 Em:AF132818.1 FT Em:AF287272.1 Em:BC007695.1 Em:BC042131.1" FT CDS join(73633466..73633726,73635999..73636872, FT 73637962..73638021,73649846..73650024) FT /gene="KLF5" FT /locus_tag="RP11-505F3.5-001" FT /standard_name="OTTHUMP00000018502" FT /product="Kruppel-like factor 5 (intestinal)" FT /note="match: proteins: Sw:Q13887.2 Tr:Q5T6X2.1" FT /protein_id="CAI14871.1" FT /translation="MATRVLSMSARLGPVPQPPAPQDEPVFAQLKPVLGAANPARDAAL FT FPGEELKHAHHRPQAQPAPAQAPQPAQPPATGPRLPPEDLVQTRCEMEKYLTPQLPPVP FT IIPEHKKYRRDSASVVDQFFTDTEGLPYSINMNVFLPDITHLRTGLYKSQRPCVTHIKT FT EPVAIFSHQSETTAPPPAPTQALPEFTSIFSSHQTAAPEVNNIFIKQELPTPDLHLSVP FT TQQGHLYQLLNTPDLDMPSSTNQTAAMDTLNVSMSAAMAGLNTHTSAVPQTAVKQFQGM FT PPCTYTMPSQFLPQQATYFPPSPPSSEPGSPDRQAEMLQNLTPPPSYAATIASKLAIHN FT PNLPTTLPVNSQNIQPVRYNRRSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG FT EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN" FT mRNA join(73634717..73634801,73635999..73636680) FT /gene="KLF5" FT /locus_tag="RP11-505F3.5-003" FT /product="Kruppel-like factor 5 (intestinal)" FT /note="match: ESTs: Em:BG717510.1" FT mRNA join(73636706..73636872,73637962..73638021, FT 73649153..73649211,73649846..73649916) FT /gene="KLF5" FT /locus_tag="RP11-505F3.5-004" FT /product="Kruppel-like factor 5 (intestinal)" FT /note="match: ESTs: Em:AA305544.1" FT polyA_signal 73651657..73651662 FT polyA_site 73651676 FT polyA_site 73651680 FT CDS complement(73674713..73675123) FT /pseudo FT /locus_tag="RP11-505F3.4-001" FT /product="fatty acid binding protein 5 FT (psoriasis-associated) (FABP5) pseudogene" FT /note="match: proteins: Sw:P02689 Sw:P02691 Sw:P55052 FT Sw:P55053 Sw:Q01469 Sw:Q05816 Tr:Q9I896" FT misc_feature 73708798 FT /note="Clone_right_end: RP11-505F3" FT misc_feature 73787391 FT /note="Clone_left_end: RP11-309J13" FT misc_feature 73806500 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT approximately 50bp by restriction digest data" FT misc_feature 73879258 FT /note="Clone_right_end: RP11-309H15" FT misc_feature 73903872 FT /note="Clone_left_end: RP11-30C8" FT misc_feature 73980896 FT /note="Clone_right_end: RP11-309J13" FT misc_feature 73980997..74025519 FT /note="annotated region of clone" FT CDS complement(73981905..73982489) FT /pseudo FT /locus_tag="RP11-30C8.1-001" FT /product="pseudogene similar to part of MAP/microtubule FT affinity-regulating kinase MARK" FT /note="match: proteins: Sw:O08679 Sw:O08875 Sw:O96017 FT Sw:P06782 Sw:P27448 Sw:P52497 Sw:Q00372 Sw:Q03141 Sw:Q7KZI7 FT Sw:Q8VHF0 Sw:Q96L34 Tr:O17048 Tr:P87209 Tr:Q94KH6 Tr:Q95SH0 FT Tr:Q95U75 Tr:Q9FZN7 Tr:Q9JLM6 Tr:Q9QYZ5 Tr:Q9SCM0 Tr:Q9SN43 FT Tr:Q9XFJ3 Tr:Q9XIW0" FT mRNA complement(join(73987610..73987773, FT AL160032.14:19368..19485)) FT /locus_tag="RP11-30C8.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG182794.1" FT misc_feature 74025320 FT /note="Clone_left_end: RP11-245E3" FT misc_feature 74025520..74101593 FT /note="annotated region of clone" FT misc_feature 74037770..74037807 FT /note="Sequence from overlapping clone bA30C8 FT (AL138964).Assembly confirmed by restriction digest data" FT misc_feature 74086091 FT /note="Clone_right_end: RP11-30C8" FT misc_feature 74101394 FT /note="Clone_left_end: RP11-474L7" FT misc_feature 74101594..74282817 FT /note="annotated region of clone" FT mRNA complement(join(74260226..74269808,AL138713.12:6788..6945, FT AL138713.12:56358..56420,AL138713.12:104572..104707, FT AL159972.8:11438..11984,AL159972.8:109592..109681, FT AL139036.12:11189..11248)) FT /gene="KLF12" FT /locus_tag="RP11-474L7.5-001" FT /product="Kruppel-like factor 12" FT /note="match: cDNAs: Em:BC019680.1" FT /note="match: ESTs: Em:AI754391.1 Em:BM682175.1 FT Em:BQ005683.1 Em:BU732372.1 Em:BU739588.1 Em:CA445518.1 FT Em:R44209.1 Em:R44212.1 Em:R44213.1" FT CDS complement(join(74269627..74269808,AL138713.12:6788..6945, FT AL138713.12:56358..56420,AL138713.12:104572..104707, FT AL159972.8:11438..11984,AL159972.8:109592..109681, FT AL139036.12:11189..11221)) FT /gene="KLF12" FT /locus_tag="RP11-474L7.5-001" FT /standard_name="OTTHUMP00000018503" FT /product="Kruppel-like factor 12" FT /note="match: proteins: Sw:O35738.1 Sw:Q9Y4X4.2 Tr:Q6NWV9.1 FT Tr:Q8WWI3.1" FT /protein_id="CAH74171.1" FT /translation="MNIHMKRKTIKNINTFENRMLMLDGMPAVRVKTELLESEQGSPNV FT HNYPDMEAVPLLLNNVKGEPPEDSLSVDHFQTQTEPVDLSINKARTSPTAVSSSPVSMT FT ASASSPSSTSTSSSSSSRLASSPTVITSVSSASSSSTVLTPGPLVASASGVGGQQFLHI FT IHPVPPSSPMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGRGHG FT KAQMDPRGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGN FT RMNNQKFPCSISPFSIESTRRQRRSESPDSRKRRIHRCDFEGCNKVYTKSSHLKAHRRT FT HTGEKPYKCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRH FT MLV" FT mRNA complement(join(AL138964.11:6714..6877,74120861..74120978)) FT /locus_tag="RP11-30C8.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG182794.1" FT mRNA join(74138381..74138439,74161476..74161582, FT 74161817..74162207) FT /locus_tag="RP11-474L7.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AW087731.1 Em:AW592202.1" FT misc_feature 74149070..74149175 FT /note="Single clone region. Assembly confirmed by FT restriction digest data" FT misc_feature 74207159 FT /note="Clone_right_end: RP11-245E3" FT mRNA complement(join(74120525..74120978,74222360..74222390)) FT /locus_tag="RP11-30C8.2-002" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI887618.1" FT misc_feature 74225968 FT /note="Clone_left_end: RP11-552M6" FT polyA_site complement(74260226) FT polyA_signal complement(74260246..74260251) FT polyA_site complement(74268412) FT polyA_site complement(74268425) FT polyA_site complement(74268428) FT polyA_signal complement(74268441..74268446) FT misc_feature 74282717 FT /note="Clone_right_end: RP11-474L7" FT misc_feature 74282818..74404613 FT /note="annotated region of clone" FT mRNA complement(join(74387010..74387424,AL159972.8:11438..11984, FT AL159972.8:109592..109681,AL139036.12:11189..11255)) FT /gene="KLF12" FT /locus_tag="RP11-474L7.5-002" FT /product="Kruppel-like factor 12" FT /note="match: cDNAs: Em:AF113122.1 Em:AF161471.1" FT mRNA complement(join(AL160032.14:158733..168315, FT 74289505..74289662,74339075..74339137,74387289..74387424, FT AL159972.8:11438..11984,AL159972.8:109592..109681, FT AL139036.12:11189..11248)) FT /gene="KLF12" FT /locus_tag="RP11-474L7.5-001" FT /product="Kruppel-like factor 12" FT /note="match: cDNAs: Em:BC019680.1" FT /note="match: ESTs: Em:AI754391.1 Em:BM682175.1 FT Em:BQ005683.1 Em:BU732372.1 Em:BU739588.1 Em:CA445518.1 FT Em:R44209.1 Em:R44212.1 Em:R44213.1" FT CDS complement(join(AL160032.14:168134..168315, FT 74289505..74289662,74339075..74339137,74387289..74387424, FT AL159972.8:11438..11984,AL159972.8:109592..109681, FT AL139036.12:11189..11221)) FT /gene="KLF12" FT /locus_tag="RP11-474L7.5-001" FT /standard_name="OTTHUMP00000018503" FT /product="Kruppel-like factor 12" FT /note="match: proteins: Sw:O35738.1 Sw:Q9Y4X4.2 Tr:Q6NWV9.1 FT Tr:Q8WWI3.1" FT /protein_id="CAI15634.1" FT /translation="MNIHMKRKTIKNINTFENRMLMLDGMPAVRVKTELLESEQGSPNV FT HNYPDMEAVPLLLNNVKGEPPEDSLSVDHFQTQTEPVDLSINKARTSPTAVSSSPVSMT FT ASASSPSSTSTSSSSSSRLASSPTVITSVSSASSSSTVLTPGPLVASASGVGGQQFLHI FT IHPVPPSSPMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGRGHG FT KAQMDPRGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGN FT RMNNQKFPCSISPFSIESTRRQRRSESPDSRKRRIHRCDFEGCNKVYTKSSHLKAHRRT FT HTGEKPYKCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRH FT MLV" FT misc_feature 74348697 FT /note="Clone_left_end: RP11-13H5" FT misc_feature 74404513 FT /note="Clone_right_end: RP11-552M6" FT misc_feature 74404614..74408626 FT /note="annotated region of clone" FT misc_feature 74408427 FT /note="Clone_left_end: RP11-157H4" FT misc_feature 74408627..74558038 FT /note="annotated region of clone" FT mRNA complement(join(AL138713.12:104293..104707, FT 74419964..74420510,74518118..74518207, FT AL139036.12:11189..11255)) FT /gene="KLF12" FT /locus_tag="RP11-474L7.5-002" FT /product="Kruppel-like factor 12" FT /note="match: cDNAs: Em:AF113122.1 Em:AF161471.1" FT mRNA complement(join(AL160032.14:158733..168315, FT AL138713.12:6788..6945,AL138713.12:56358..56420, FT AL138713.12:104572..104707,74419964..74420510, FT 74518118..74518207,AL139036.12:11189..11248)) FT /gene="KLF12" FT /locus_tag="RP11-474L7.5-001" FT /product="Kruppel-like factor 12" FT /note="match: cDNAs: Em:BC019680.1" FT /note="match: ESTs: Em:AI754391.1 Em:BM682175.1 FT Em:BQ005683.1 Em:BU732372.1 Em:BU739588.1 Em:CA445518.1 FT Em:R44209.1 Em:R44212.1 Em:R44213.1" FT CDS complement(join(AL160032.14:168134..168315, FT AL138713.12:6788..6945,AL138713.12:56358..56420, FT AL138713.12:104572..104707,74419964..74420510, FT 74518118..74518207,AL139036.12:11189..11221)) FT /gene="KLF12" FT /locus_tag="RP11-474L7.5-001" FT /standard_name="OTTHUMP00000018503" FT /product="Kruppel-like factor 12" FT /note="match: proteins: Sw:O35738.1 Sw:Q9Y4X4.2 Tr:Q6NWV9.1 FT Tr:Q8WWI3.1" FT /protein_id="CAH70670.1" FT /translation="MNIHMKRKTIKNINTFENRMLMLDGMPAVRVKTELLESEQGSPNV FT HNYPDMEAVPLLLNNVKGEPPEDSLSVDHFQTQTEPVDLSINKARTSPTAVSSSPVSMT FT ASASSPSSTSTSSSSSSRLASSPTVITSVSSASSSSTVLTPGPLVASASGVGGQQFLHI FT IHPVPPSSPMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGRGHG FT KAQMDPRGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGN FT RMNNQKFPCSISPFSIESTRRQRRSESPDSRKRRIHRCDFEGCNKVYTKSSHLKAHRRT FT HTGEKPYKCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRH FT MLV" FT misc_feature 74514924 FT /note="Clone_left_end: RP11-285H24" FT misc_feature 74557938 FT /note="Clone_right_end: RP11-157H4" FT misc_feature 74558039..74667748 FT /note="annotated region of clone" FT mRNA complement(join(AL138713.12:104293..104707, FT AL159972.8:11438..11984,AL159972.8:109592..109681, FT 74569127..74569193)) FT /gene="KLF12" FT /locus_tag="RP11-474L7.5-002" FT /product="Kruppel-like factor 12" FT /note="match: cDNAs: Em:AF113122.1 Em:AF161471.1" FT mRNA complement(join(AL160032.14:158733..168315, FT AL138713.12:6788..6945,AL138713.12:56358..56420, FT AL138713.12:104572..104707,AL159972.8:11438..11984, FT AL159972.8:109592..109681,74569127..74569186)) FT /gene="KLF12" FT /locus_tag="RP11-474L7.5-001" FT /product="Kruppel-like factor 12" FT /note="match: cDNAs: Em:BC019680.1" FT /note="match: ESTs: Em:AI754391.1 Em:BM682175.1 FT Em:BQ005683.1 Em:BU732372.1 Em:BU739588.1 Em:CA445518.1 FT Em:R44209.1 Em:R44212.1 Em:R44213.1" FT CDS complement(join(AL160032.14:168134..168315, FT AL138713.12:6788..6945,AL138713.12:56358..56420, FT AL138713.12:104572..104707,AL159972.8:11438..11984, FT AL159972.8:109592..109681,74569127..74569159)) FT /gene="KLF12" FT /locus_tag="RP11-474L7.5-001" FT /standard_name="OTTHUMP00000018503" FT /product="Kruppel-like factor 12" FT /note="match: proteins: Sw:O35738.1 Sw:Q9Y4X4.2 Tr:Q6NWV9.1 FT Tr:Q8WWI3.1" FT /protein_id="CAH71998.1" FT /translation="MNIHMKRKTIKNINTFENRMLMLDGMPAVRVKTELLESEQGSPNV FT HNYPDMEAVPLLLNNVKGEPPEDSLSVDHFQTQTEPVDLSINKARTSPTAVSSSPVSMT FT ASASSPSSTSTSSSSSSRLASSPTVITSVSSASSSSTVLTPGPLVASASGVGGQQFLHI FT IHPVPPSSPMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGRGHG FT KAQMDPRGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGN FT RMNNQKFPCSISPFSIESTRRQRRSESPDSRKRRIHRCDFEGCNKVYTKSSHLKAHRRT FT HTGEKPYKCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRH FT MLV" FT misc_feature 74667549 FT /note="Clone_left_end: RP11-810G21" FT misc_feature 74680501 FT /note="Clone_right_end: RP11-285H24" FT misc_feature 74686180..74686351 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 74686566..74686864 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 74804709 FT /note="Clone_left_end: RP11-459P23" FT misc_feature 74804909..74934049 FT /note="annotated region of clone" FT mRNA join(74805594..74805889,74831070..74834113) FT /locus_tag="RP11-459P23.1-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK056689" FT /note="match: ESTs: Em:F33908" FT misc_feature 74844185 FT /note="Clone_right_end: RP11-810G21" FT misc_feature 74933850 FT /note="Clone_left_end: RP11-512C24" FT misc_feature 74934050..75092900 FT /note="annotated region of clone" FT polyA_signal complement(74951279..74951284) FT CDS complement(join(74951300..74951424,74951733..74952088)) FT /pseudo FT /locus_tag="RP11-512C24.1-001" FT /product="60S ribososmal protein L21 (RPL21) pseudogene" FT /note="match: proteins: Sw:O09167 Sw:O82574 Sw:P20280 FT Sw:P34334 Sw:P46778 Sw:P49667 Sw:Q02753 Sw:Q12672 FT Tr:Q9V9M7" FT misc_feature 74975423 FT /note="Clone_right_end: RP11-459P23" FT mRNA join(74993310..74993365,74993580..74993676, FT 75000230..75000555,75008640..75008759,75009169..75009296) FT /locus_tag="RP11-512C24.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA397742 Em:AA421131" FT polyA_signal 75009274..75009279 FT polyA_site 75009296 FT misc_feature 75056053 FT /note="Clone_left_end: RP11-285E18" FT misc_feature 75092800 FT /note="Clone_right_end: RP11-512C24" FT misc_feature 75092901..75204150 FT /note="annotated region of clone" FT mRNA join(75126980..75127040,75128794..75128897, FT 75129362..75130021) FT /locus_tag="RP11-285E18.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA429490 Em:BI559711" FT mRNA join(75126987..75127040,75128750..75128897, FT 75129362..75129973) FT /locus_tag="RP11-285E18.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BI561085 Em:BI826954" FT misc_feature 75155942 FT /note="Clone_right_end: RP11-157E18" FT misc_feature 75203951 FT /note="Clone_left_end: RP11-157E11" FT misc_feature 75213689 FT /note="Clone_right_end: RP11-285E18" FT misc_feature 75377488 FT /note="Clone_right_end: RP11-157E11" FT misc_feature 75377589..75413893 FT /note="annotated region of clone" FT misc_feature 75384763 FT /note="Tandem repeat. Forced join. Gap sized to be FT approximately 400bp by restriction digest data" FT CDS 75402690..75404217 FT /pseudo FT /locus_tag="RP11-488P11.1-001" FT /product="sudD suppressor of bimD6 homolog (A.nidulans) FT (SUDD) pseudogene" FT /note="match: proteins: Sw:O14730 Sw:Q9DBU3" FT misc_feature 75413694 FT /note="Clone_left_end: RP11-138N13" FT misc_feature 75457286 FT /note="Clone_left_end: RP11-394J19" FT misc_feature 75560401 FT /note="Clone_right_end: RP11-138N13" FT misc_feature 75620914 FT /note="Clone_left_end: RP11-132L12" FT misc_feature 75621114..75772616 FT /note="annotated region of clone" FT CDS 75710291..75711077 FT /pseudo FT /locus_tag="RP11-132L12.1-001" FT /product="signal sequence receptor, alpha FT (translocon-associated protein alpha) (SSR1) pseudogene" FT /note="match: proteins: Sw:P43307 Sw:P53815" FT misc_feature 75752899 FT /note="Clone_left_end: RP11-159J2" FT misc_feature 75772516 FT /note="Clone_right_end: RP11-132L12" FT misc_feature 75772617..75930826 FT /note="annotated region of clone" FT CDS complement(75812080..75814432) FT /pseudo FT /locus_tag="RP11-159J2.1-001" FT /product="meningioma expressed antigen 6 (coiled-coil FT proline-rich) (MGEA6) pseudogene" FT /note="match: proteins: Sw:O15320 Sw:Q8IX94 Sw:Q96RT6 FT Tr:Q92580 Tr:Q96N90" FT mRNA join(75824616..75824737,75825884..75826148) FT /locus_tag="RP11-159J2.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA442466" FT misc_feature 75849665..75849756 FT /note="Single clone region. Sequence from clone PCR only" FT polyA_site complement(75858808) FT polyA_signal complement(75858826..75858831) FT mRNA complement(join(75869001..75869149,75873466..75873710, FT 75876379..75876537,75876752..75876957)) FT /gene="TBC1D4" FT /locus_tag="RP11-159J2.3-002" FT /product="TBC1 domain family, member 4" FT /note="match: ESTs: Em:BI461342" FT mRNA complement(join(75880602..75880607,75884078..75884287, FT 75886874..75887034,75890608..75890688)) FT /gene="TBC1D4" FT /locus_tag="RP11-159J2.3-005" FT /product="TBC1 domain family, member 4" FT /note="match: ESTs: Em:AW500463.1" FT misc_feature 75892138 FT /note="Clone_left_end: RP11-182M20" FT mRNA complement(join(75858808..75861161,75863070..75863246, FT 75866238..75866407,75868990..75869149,75873466..75873710, FT 75876379..75876537,75880449..75880607,75884078..75884287, FT 75886874..75887034,75894150..75894173,75898373..75898537, FT 75900333..75900559,75901888..75901962,75911057..75911176, FT 75915261..75915371,75915632..75915723,75923306..75923438, FT 75930283..75930387,AL139230.25:3179..3268, FT AL139230.25:5436..6017,AL139230.25:124680..125524)) FT /gene="TBC1D4" FT /locus_tag="RP11-159J2.3-001" FT /product="TBC1 domain family, member 4" FT /note="match: ESTs: Em:AA132179 Em:AI031998 Em:AI131545 FT Em:AI288945 Em:AI701100 Em:AI862666 Em:AI954916 Em:AJ448582 FT Em:AL044718 Em:AU122714 Em:AU131381 Em:AW084628 Em:AW137257 FT Em:AW191700 Em:AW191707 Em:AW241975 Em:AW241996 Em:AW311729 FT Em:AW311740 Em:AW478887 Em:AW500463 Em:AW988132 Em:BB629184 FT Em:BE308166 Em:BE621492 Em:BE732429 Em:BF082890 Em:BF094555 FT Em:BF758705 Em:BG107559 Em:BI064425 Em:BI771486 Em:BI836865 FT Em:BI855001 Em:BM389480 Em:BM471733 Em:BM543202 Em:BM676616 FT Em:BQ422796 Em:T33701 Em:Z28825" FT /note="match: cDNAs: Em:AB011175" FT CDS complement(join(75860928..75861161,75863070..75863246, FT 75866238..75866407,75868990..75869149,75873466..75873710, FT 75876379..75876537,75880449..75880607,75884078..75884287, FT 75886874..75887034,75894150..75894173,75898373..75898537, FT 75900333..75900559,75901888..75901962,75911057..75911176, FT 75915261..75915371,75915632..75915723,75923306..75923438, FT 75930283..75930387,AL139230.25:3179..3268, FT AL139230.25:5436..6017,AL139230.25:124680..125177)) FT /gene="TBC1D4" FT /locus_tag="RP11-159J2.3-001" FT /standard_name="OTTHUMP00000018505" FT /product="TBC1 domain family, member 4" FT /note="match: proteins: Sw:O60343" FT /protein_id="CAI39591.1" FT /translation="MEPPSCIQDEPFPHPLEPEPGVSAQPGPGKPSDKRFRLWYVGGSC FT LDHRTTLPMLPWLMAEIRRRSQKPEAGGCGAPAAREVILVLSAPFLRCVPAPGAGASGG FT TSPSATQPNPAVFIFEHKAQHISRFIHNSHDLTYFAYLIKAQPDDPESQMACHVFRATD FT PSQVPDVISSIRQLSKAAMKEDAKPSKDNEDAFYNSQKFEVLYCGKVTVTHKKAPSSLI FT DDCMEKFSLHEQQRLKIQGEQRGPDPGEDLADLEVVVPGSPGDCLPEEADGTDTHLGLP FT AGASQPALTSSRVCFPERILEDSGFDEQQEFRSRCSSVTGVQRRVHEGSQKSQPRRRHA FT SAPSHVQPSDSEKNRTMLFQVGRFEINLISPDTKSVVLEKNFKDISSCSQGIKHVDHFG FT FICRESPEPGLSQYICYVFQCASESLVDEVMLTLKQAFSTAAALQSAKTQIKLCEACPM FT HSLHKLCERIEGLYPPRAKLVIQRHLSSLTDNEQADIFERVQKMKPVSDQEENELVILH FT LRQLCEAKQKTHVHIGEGPSTISNSTIPENATSSGRFKLDILKNKAKRSLTSSLENIFS FT RGANRMRGRLGSVDSFERSNSLASEKDYSPGDSPPGTPPASPPSSAWQTFPEEDSDSPQ FT FRRRAHTFSHPPSSTKRKLNLQDGRAQGVRSPLLRQSSSEQCSNLSSVRRMYKESNSSS FT SLPSLHTSFSAPSFTAPSFLKSFYQNSGRLSPQYENEIRQDTASESSDGEGRKRTSSTC FT SNESLSVGGTSVTPRRISWRQRIFLRVASPMNKSPSAMQQQDGLDRNELLPLSPLSPTM FT EEEPLVVFLSGEDDPEKIEERKKSKELRSLWRKAIHQQILLLRMEKENQKLEASRDELQ FT SRKVKLDYEEVGACQKEVLITWDKKLLNCRAKIRCDMEDIHTLLKEGVPKSRRGEIWQF FT LALQYRLRHRLPNKQQPPDISYKELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPGQL FT SLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDM FT MSLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFSLGFVARVFDI FT IFLQGTEVIFKVALSLLSSQETLIMECESFENIVEFLKNTLPDMNTSEMEKIITQVFEM FT DISKQLHAYEVEYHVLQDELQESSYSCEDSETLEKLERANSQLKRQNMDLLEKLQVAHT FT KIQALESNLENLLTRETKMKSLIRTLEQEKMAYQKTVEQLRKLLPADALVNCDLLLRDL FT NCNPNNKAKIGNKP" FT mRNA complement(join(75886918..75887034,75898373..75898537, FT 75900333..75900386)) FT /gene="TBC1D4" FT /locus_tag="RP11-159J2.3-003" FT /product="TBC1 domain family, member 4" FT /note="match: ESTs: Em:Z25171" FT mRNA complement(join(<75884171..75884287,75886874..75887034, FT 75900333..75900559,75901888..75901962,75911057..75911176, FT 75915261..75915371,75915632..>75915667)) FT /gene="TBC1D4" FT /locus_tag="RP11-159J2.3-004" FT /product="TBC1 domain family, member 4" FT /note="match: ESTs: Em:AA744876 Em:AA825574 Em:AI459006 FT Em:AI681345 Em:AW137257 Em:AW978954 Em:BE852056 FT Em:BF432965" FT CDS complement(join(<75884171..75884287,75886874..75887034, FT 75900333..75900559,75901888..75901962,75911057..75911176, FT 75915261..75915371,75915632..>75915667)) FT /codon_start=1 FT /gene="TBC1D4" FT /locus_tag="RP11-159J2.3-004" FT /standard_name="OTTHUMP00000018506" FT /product="TBC1 domain family, member 4" FT /protein_id="CAI39592.1" FT /translation="DNEQADIFERVQKMKPVSDQEENELVILHLRQLCEAKQKTHVHIG FT EGPSTISNSTIPENATSSGRFKLDILKNKAKRSLTSSLENIFSRGANRMRGRLGSVDSF FT ERSNSLASEKDYSPGDSPPGTPPASPPSSAWQTFPEEDSDSPQFRRRAHTFSHPPSSTK FT RKLNLQDGRAQGVRSPLLRQSSSEQCSDGEGRKRTSSTCSNESLSVGGTSVTPRRISWR FT QRIFLRVASPMNKSPSAMQQQDGLDRNELLPLSPLSPTMEEEPLVVFLSGEDDPEKIEE FT R" FT misc_feature 75930726 FT /note="Clone_right_end: RP11-159J2" FT misc_feature 75930827..76064088 FT /note="annotated region of clone" FT mRNA join(75949647..75949824,75949987..75950209) FT /locus_tag="RP11-182M20.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AI476347" FT mRNA complement(join(AL162571.9:86292..88645, FT AL162571.9:90554..90730,AL162571.9:93722..93891, FT AL162571.9:96474..96633,AL162571.9:100950..101194, FT AL162571.9:103863..104021,AL162571.9:107933..108091, FT AL162571.9:111562..111771,AL162571.9:114358..114518, FT AL162571.9:121634..121657,AL162571.9:125857..126021, FT AL162571.9:127817..128043,AL162571.9:129372..129446, FT AL162571.9:138541..138660,AL162571.9:142745..142855, FT AL162571.9:143116..143207,AL162571.9:150790..150922, FT AL162571.9:157767..157871,75933905..75933994, FT 75936162..75936743,76055406..76056250)) FT /gene="TBC1D4" FT /locus_tag="RP11-159J2.3-001" FT /product="TBC1 domain family, member 4" FT /note="match: cDNAs: Em:AB011175" FT /note="match: ESTs: Em:AA132179 Em:AI031998 Em:AI131545 FT Em:AI288945 Em:AI701100 Em:AI862666 Em:AI954916 Em:AJ448582 FT Em:AL044718 Em:AU122714 Em:AU131381 Em:AW084628 Em:AW137257 FT Em:AW191700 Em:AW191707 Em:AW241975 Em:AW241996 Em:AW311729 FT Em:AW311740 Em:AW478887 Em:AW500463 Em:AW988132 Em:BB629184 FT Em:BE308166 Em:BE621492 Em:BE732429 Em:BF082890 Em:BF094555 FT Em:BF758705 Em:BG107559 Em:BI064425 Em:BI771486 Em:BI836865 FT Em:BI855001 Em:BM389480 Em:BM471733 Em:BM543202 Em:BM676616 FT Em:BQ422796 Em:T33701 Em:Z28825" FT CDS complement(join(AL162571.9:88412..88645, FT AL162571.9:90554..90730,AL162571.9:93722..93891, FT AL162571.9:96474..96633,AL162571.9:100950..101194, FT AL162571.9:103863..104021,AL162571.9:107933..108091, FT AL162571.9:111562..111771,AL162571.9:114358..114518, FT AL162571.9:121634..121657,AL162571.9:125857..126021, FT AL162571.9:127817..128043,AL162571.9:129372..129446, FT AL162571.9:138541..138660,AL162571.9:142745..142855, FT AL162571.9:143116..143207,AL162571.9:150790..150922, FT AL162571.9:157767..157871,75933905..75933994, FT 75936162..75936743,76055406..76055903)) FT /gene="TBC1D4" FT /locus_tag="RP11-159J2.3-001" FT /standard_name="OTTHUMP00000018505" FT /product="TBC1 domain family, member 4" FT /note="match: proteins: Sw:O60343" FT /protein_id="CAH70991.1" FT /translation="MEPPSCIQDEPFPHPLEPEPGVSAQPGPGKPSDKRFRLWYVGGSC FT LDHRTTLPMLPWLMAEIRRRSQKPEAGGCGAPAAREVILVLSAPFLRCVPAPGAGASGG FT TSPSATQPNPAVFIFEHKAQHISRFIHNSHDLTYFAYLIKAQPDDPESQMACHVFRATD FT PSQVPDVISSIRQLSKAAMKEDAKPSKDNEDAFYNSQKFEVLYCGKVTVTHKKAPSSLI FT DDCMEKFSLHEQQRLKIQGEQRGPDPGEDLADLEVVVPGSPGDCLPEEADGTDTHLGLP FT AGASQPALTSSRVCFPERILEDSGFDEQQEFRSRCSSVTGVQRRVHEGSQKSQPRRRHA FT SAPSHVQPSDSEKNRTMLFQVGRFEINLISPDTKSVVLEKNFKDISSCSQGIKHVDHFG FT FICRESPEPGLSQYICYVFQCASESLVDEVMLTLKQAFSTAAALQSAKTQIKLCEACPM FT HSLHKLCERIEGLYPPRAKLVIQRHLSSLTDNEQADIFERVQKMKPVSDQEENELVILH FT LRQLCEAKQKTHVHIGEGPSTISNSTIPENATSSGRFKLDILKNKAKRSLTSSLENIFS FT RGANRMRGRLGSVDSFERSNSLASEKDYSPGDSPPGTPPASPPSSAWQTFPEEDSDSPQ FT FRRRAHTFSHPPSSTKRKLNLQDGRAQGVRSPLLRQSSSEQCSNLSSVRRMYKESNSSS FT SLPSLHTSFSAPSFTAPSFLKSFYQNSGRLSPQYENEIRQDTASESSDGEGRKRTSSTC FT SNESLSVGGTSVTPRRISWRQRIFLRVASPMNKSPSAMQQQDGLDRNELLPLSPLSPTM FT EEEPLVVFLSGEDDPEKIEERKKSKELRSLWRKAIHQQILLLRMEKENQKLEASRDELQ FT SRKVKLDYEEVGACQKEVLITWDKKLLNCRAKIRCDMEDIHTLLKEGVPKSRRGEIWQF FT LALQYRLRHRLPNKQQPPDISYKELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPGQL FT SLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDM FT MSLQIQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFSLGFVARVFDI FT IFLQGTEVIFKVALSLLSSQETLIMECESFENIVEFLKNTLPDMNTSEMEKIITQVFEM FT DISKQLHAYEVEYHVLQDELQESSYSCEDSETLEKLERANSQLKRQNMDLLEKLQVAHT FT KIQALESNLENLLTRETKMKSLIRTLEQEKMAYQKTVEQLRKLLPADALVNCDLLLRDL FT NCNPNNKAKIGNKP" FT misc_feature 76063889 FT /note="Clone_left_end: RP11-173B14" FT misc_feature 76064089..76247346 FT /note="annotated region of clone" FT misc_feature 76073817 FT /note="Clone_right_end: RP11-182M20" FT polyA_site complement(76099355) FT polyA_signal complement(76099366..76099371) FT polyA_site complement(76100572) FT polyA_signal complement(76100589..76100594) FT mRNA complement(join(76100572..76100775,76104250..76104640)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-009" FT /product="COMM domain containing 6" FT /note="match: ESTs: Em:CB241731.1" FT mRNA complement(join(76100572..76100775,76104250..76104402, FT 76111518..76111754)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-003" FT /product="COMM domain containing 6" FT /note="match: ESTs: Em:AW976851.1" FT CDS complement(join(76100725..76100775,76104250..76104402, FT 76111518..76111616)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-003" FT /standard_name="OTTHUMP00000200354" FT /product="COMM domain containing 6" FT /protein_id="CAQ09794.1" FT /translation="MKAPLPHPALARRMQIKDCWALIRRQLFEARNTLVDFQWKLGMAV FT SSDTCRSLKYPYVAVMLKVADHSGQVKTKCFEMTIPQFQNFYRQFKEIAAVIETV" FT mRNA complement(join(76100572..76100775,76104447..76104541, FT 76111800..76111811,76111900..76111962)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-007" FT /product="COMM domain containing 6" FT /note="match: ESTs: Em:AA421772.1 Em:AI350272.1 FT Em:BP418844.1 Em:N55906.1" FT CDS complement(join(76100725..76100775,76104250..76104402, FT 76111800..76111811,76111900..76111941)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-001" FT /standard_name="OTTHUMP00000018507" FT /product="COMM domain containing 6" FT /note="match: proteins: Sw:Q7Z4G1.1 Tr:Q5TBK4.1" FT /protein_id="CAI12417.1" FT /translation="MEASSEPPLDAKSDVTNQLVDFQWKLGMAVSSDTCRSLKYPYVAV FT MLKVADHSGQVKTKCFEMTIPQFQNFYRQFKEIAAVIETV" FT mRNA complement(join(76100572..76100775,76104447..76104544, FT 76111800..76111811,76111900..76111977)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-004" FT /product="COMM domain containing 6" FT /note="match: ESTs: Em:BG184620.1 Em:BU587226.1" FT mRNA complement(join(76100572..76100775,76101949..76101987, FT 76104250..76104402,76111800..76111811,76111900..76111977)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-005" FT /product="COMM domain containing 6" FT /note="match: ESTs: Em:AA535445.1 Em:AI832754.1 FT Em:AW516002.1 Em:D56237.1 Em:DW440523.1" FT CDS complement(join(76100725..76100775,76101949..76101987, FT 76104250..76104402,76111800..76111811,76111900..76111941)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-005" FT /standard_name="OTTHUMP00000200355" FT /product="COMM domain containing 6" FT /note="match: proteins: Sw:Q7Z4G1-2.1" FT /protein_id="CAQ09795.1" FT /translation="MEASSEPPLDAKSDVTNQLVDFQWKLGMAVSSDTCRSLKYPYVAV FT MLKVADHSGQVKTKCFEMTIPQFQPQLLATSSLLSASNFYRQFKEIAAVIETV" FT mRNA complement(join(76103960..76104402,76111800..76111811, FT 76111900..76111977)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-010" FT /product="COMM domain containing 6" FT /note="match: ESTs: Em:DA216873.1" FT mRNA complement(join(76103845..76104541,76111800..76111811, FT 76111900..76111980)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-008" FT /product="COMM domain containing 6" FT /note="match: ESTs: Em:BG036901.1" FT mRNA complement(join(76099355..76100775,76104250..76104402, FT 76111800..76111811,76111900..76112056,76112889..76112938)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-001" FT /product="COMM domain containing 6" FT /note="match: cDNAs: Em:AF169971.1 Em:AK000009.1 FT Em:BC110837.1 Em:BC117391.1" FT /note="match: ESTs: Em:AA425275.1 Em:AA435526.1 FT Em:AL553995.3 Em:AL553996.3" FT mRNA complement(join(76100572..76100775,76104250..76104395, FT 76111877..76112056,76112889..76112938)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-006" FT /product="COMM domain containing 6" FT /note="match: cDNAs: Em:CR603325.1" FT misc_feature 76123121..76123292 FT /note="Single clone region. Sequence from clone PCR only" FT mRNA complement(join(76100572..76100775,76104250..76104402, FT 76123459..76123564)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-011" FT /product="COMM domain containing 6" FT /note="match: ESTs: Em:DB444470.2 Em:DB509325.2" FT mRNA complement(join(76104250..76104402,76111635..76111811, FT 76123459..76123575)) FT /gene="COMMD6" FT /locus_tag="RP11-173B14.2-012" FT /product="COMM domain containing 6" FT /note="match: ESTs: Em:DB489071.1" FT mRNA join(76123619..76123817,76134889..76135017, FT 76140831..76140987,76141363..76141448,76143596..76143643, FT 76169051..76169126) FT /gene="UCHL3" FT /locus_tag="RP11-173B14.3-002" FT /product="ubiquitin carboxyl-terminal esterase L3 FT (ubiquitin thiolesterase)" FT /note="match: ESTs: Em:BG432835" FT mRNA join(76123927..76123998,76124112..76124123, FT 76134889..76135017,76140831..76140987,76141363..76141448, FT 76143596..76143643,76169051..76169126,76178905..76178963, FT 76179865..76180069) FT /gene="UCHL3" FT /locus_tag="RP11-173B14.3-001" FT /product="ubiquitin carboxyl-terminal esterase L3 FT (ubiquitin thiolesterase)" FT /note="match: ESTs: Em:BU681570.1 Em:CA307428.1 FT Em:CA309382.1" FT /note="match: cDNAs: Em:BC018125.2 Em:BC110247.1 FT Em:BT019359.1 Em:CR456855.1 Em:CR610104.1" FT CDS join(76123957..76123998,76124112..76124123, FT 76134889..76135017,76140831..76140987,76141363..76141448, FT 76143596..76143643,76169051..76169126,76178905..76178963, FT 76179865..76179948) FT /gene="UCHL3" FT /locus_tag="RP11-173B14.3-001" FT /standard_name="OTTHUMP00000018509" FT /product="ubiquitin carboxyl-terminal esterase L3 FT (ubiquitin thiolesterase)" FT /note="match: proteins: Sw:P15374.1 Sw:Q2TBG8.1 Sw:Q91Y78.1 FT Sw:Q9JKB1.2 Tr:Q28GY5.1 Tr:Q5XHE2.1 Tr:Q9PW67.1" FT /protein_id="CAI12419.1" FT /translation="MEGQRWLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMV FT PRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAI FT ANNKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEGQTEAPSID FT EKVDLHFIALVHVDGHLYELDGRKPFPINHGETSDETLLEDAIEVCKKFMERDPDELRF FT NAIALSAA" FT CDS join(<76140846..76140987,76141363..76141448, FT 76143596..76143643,76164074..76164265,76169051..76169126, FT 76178905..76178963,76179865..76179948) FT /codon_start=1 FT /gene="UCHL3" FT /locus_tag="RP11-173B14.3-003" FT /standard_name="OTTHUMP00000018511" FT /product="ubiquitin carboxyl-terminal esterase L3 FT (ubiquitin thiolesterase)" FT /protein_id="CAI12421.1" FT /translation="TEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKM FT HFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEGQTESSSPSSSQPHSS FT HCRTKASSLCHHASLPWVKRNHVGPAKATSPSLRLRRWRPFLRLPSLGLHSVAPSIDEK FT VDLHFIALVHVDGHLYELDGRKPFPINHGETSDETLLEDAIEVCKKFMERDPDELRFNA FT IALSAA" FT mRNA join(<76140846..76140987,76141363..76141448, FT 76143596..76143643,76164074..76164265,76169051..76169126, FT 76178905..76178963,76179865..76180085) FT /gene="UCHL3" FT /locus_tag="RP11-173B14.3-003" FT /product="ubiquitin carboxyl-terminal esterase L3 FT (ubiquitin thiolesterase)" FT /note="match: ESTs: Em:BI059146 Em:BQ552686" FT polyA_signal 76180048..76180053 FT polyA_site 76180069 FT mRNA join(76194570..76196004,76197407..76197456, FT AL137782.9:40072..40142,AL137782.9:53919..53988, FT AL137782.9:87822..87928,AL137782.9:122291..122321, FT AL137782.9:123526..123639,AL137782.9:127574..127772, FT AL137782.9:131179..131431,AL137782.9:136044..136073, FT AL137121.8:6799..6916,AL359392.9:2014..2156, FT AL359392.9:3798..4230,AL359392.9:6186..6494, FT AL359392.9:15672..15786,AL359392.9:16847..17008, FT AL359392.9:17854..17960,AL359392.9:19018..19078, FT AL359392.9:20761..20817,AL359392.9:22706..22731, FT AL359392.9:23012..23116,AL359392.9:23730..23822, FT AL359392.9:24249..24604,AL359392.9:25472..25537, FT AL359392.9:27948..28000,AL359392.9:31700..31913, FT AL359392.9:35713..36009,AL359392.9:37881..37989, FT AL359392.9:39127..39229,AL359392.9:40542..42487) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-001" FT /product="LIM domain 7" FT /note="match: ESTs: Em:AA777749.1 Em:AI768576.1 FT Em:BM997124.1 Em:BQ014473.1 Em:BQ775818.1 Em:BU634243.1 FT Em:BU742211.1" FT /note="match: cDNAs: Em:AF330045.1" FT CDS join(76195830..76196004,76197407..76197456, FT AL137782.9:40072..40142,AL137782.9:53919..53988, FT AL137782.9:87822..87928,AL137782.9:122291..122321, FT AL137782.9:123526..123639,AL137782.9:127574..127772, FT AL137782.9:131179..131431,AL137782.9:136044..136073, FT AL137121.8:6799..6916,AL359392.9:2014..2156, FT AL359392.9:3798..4230,AL359392.9:6186..6494, FT AL359392.9:15672..15786,AL359392.9:16847..17008, FT AL359392.9:17854..17960,AL359392.9:19018..19078, FT AL359392.9:20761..20817,AL359392.9:22706..22731, FT AL359392.9:23012..23116,AL359392.9:23730..23822, FT AL359392.9:24249..24604,AL359392.9:25472..25537, FT AL359392.9:27948..28000,AL359392.9:31700..31913, FT AL359392.9:35713..36009,AL359392.9:37881..37989, FT AL359392.9:39127..39229,AL359392.9:40542..40564) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-001" FT /standard_name="OTTHUMP00000018512" FT /product="LIM domain 7" FT /note="match: proteins: Tr:Q5TBK6.1" FT /protein_id="CAI12422.1" FT /translation="MKKIRICHIFTFYSWMSYDVLFQRTELGALEIWRQLICAHVCICV FT GWLYLRDRVCSKKDIILRTEQNSGRTILIKAVTEKNFETKDFRASLENGVLLCDLINKL FT KPGVIKKINRLSTPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVKQEETD FT RRVKNVLITLYWLGRKAQSNPYYNGPHLNLKAFENLLGQALTKALEDSSFLKRSGRDSG FT YGDIWCPERGEFLAPPRHHKREDSFESLDSLGSRSLTSCSSDITLRGGREGFESDTDSE FT FTFKMQDYNKDDMSYRRISAVEPKTALPFNRFLPNKSRQPSYVPAPLRKKKPDKHEDNR FT RSWASPVYTEADGTFSRLFQKIYGENGSKSMSDVSAEDVQNLRQLRYEEMQKIKSQLKE FT QDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSKRSSKTFKEMLQDRESQN FT QKSTVPSRRRMYSFDDVLEEGKRPPTMTVSEASYQSERVEEKGATYPSEIPKEDSTTFA FT KREDRVTTEIQLPSQSPVEEQSPASLSSLRSRSTQMESTRVSASLPRSYRKTDTVRLTS FT VVTPRPFGSQTRGISSLPRSYTMDDAWKYNGDVEDIKRTPNNVVSTPAPSPDASQLASS FT LSSQKEVAATEEDVTRLPSPTSPFSSLSQDQAATSKATLSSTSGLDLMSESGEGEISPQ FT REVSRSQDQFSDMRISINQTPGKSLDFGFTIKWDIPGIFVASVEAGSPAEFSQLQVDDE FT IIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGKAGSPETKWIDATSGIYNSEK FT SSNLSVTTDFSESLQSSNIESKEINGIHDESNAFESKASESISLKNLKRRSQFFEQGSS FT DSVVPDLPVPTISAPSRWVWDQEEERKRQERWQKEQDRLLQEKYQREQEKLREEWQRAK FT QEAERENSKYLDEELMVLSSNSMSLTTREPSLATWEATWSEGSKSSDREGTRAGEEERR FT QPQEEVVHEDQGKKPQDQLVIERERKWEQQLQEEQEQKRLQAEAEEQKRPAEEQKRQAE FT IERETSVRIYQYRRPVDSYDIPKTEEASSGFLPGDRNKSRSTTELDDYSTNKNGNNKYL FT DQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQRSASVNKEPVS FT LPGIMRRGESLDNLDSPRSNSWRQPPWLNQPTGFYASSSVQDFSRPPPQLVSTSNRAYM FT RNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSASQSGSQLRNRSVSGKRICSYCN FT NILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCNDCYLRFKS FT GRPTAM" FT mRNA complement(join(76203370..76204548,76205407..76206271)) FT /locus_tag="RP11-173B14.4-001" FT /product="novel transcript" FT /note="match: cDNAs: Em:AK027238" FT mRNA join(76210483..76210862,AL137782.9:40072..40142, FT AL137782.9:53919..53988,AL137782.9:87822..>87878) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-004" FT /product="LIM domain 7" FT /note="match: ESTs: Em:BE270452" FT CDS join(76210794..76210862,AL137782.9:40072..40142, FT AL137782.9:53919..53988,AL137782.9:87822..>87878) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-004" FT /standard_name="OTTHUMP00000018515" FT /product="LIM domain 7" FT /protein_id="CAI12423.1" FT /translation="MEGLEEAEANCSVAFAEAQRWVEAVTEKNFETKDFRASLENGVLL FT CDLINKLKPGVIKKINRLSTPIAGLDNINVFLKACEQIGLKEAQ" FT misc_feature 76231793..76231837 FT /note="Single clone region. Sequence from clone PCR only" FT misc_feature 76240911 FT /note="Clone_left_end: RP11-29G8" FT misc_feature 76247246 FT /note="Clone_right_end: RP11-173B14" FT misc_feature 76247347..76386498 FT /note="annotated region of clone" FT CDS complement(76262692..76263333) FT /pseudo FT /locus_tag="RP11-29G8.2-001" FT /product="novel pseudogene" FT /note="match: proteins: Sw:Q9H8W3" FT misc_feature 76309526..76309593 FT /note="Weak data" FT mRNA join(76334580..76334801,76335068..76335174, FT 76369537..76369567,76370772..76370885,76374820..76375018, FT 76378425..76378597) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-005" FT /product="LIM domain 7" FT /note="match: ESTs: Em:BB605043 Em:BB663799 Em:BG716094" FT mRNA join(76334867..76335174,76369537..76369567, FT 76370772..76370885,76374820..76375018,76378425..76378677, FT 76379615..76379896,76381616..76382335,76383290..76383319, FT AL137121.8:6799..6916,AL359392.9:2014..2156, FT AL359392.9:3798..4230,AL359392.9:6186..6494, FT AL359392.9:15672..15786,AL359392.9:16847..17008, FT AL359392.9:17854..17960,AL359392.9:19018..19078, FT AL359392.9:20761..20817,AL359392.9:22706..22731, FT AL359392.9:23012..23116,AL359392.9:23730..23822, FT AL359392.9:24249..24604,AL359392.9:25472..25537, FT AL359392.9:27948..28000,AL359392.9:31700..31913, FT AL359392.9:35713..36009,AL359392.9:39127..39229, FT AL359392.9:40542..41296) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-002" FT /product="LIM domain 7" FT /note="match: cDNAs: Em:AB020665 Em:AF174600" FT /note="match: ESTs: Em:AI754378.1 Em:F05837 Em:H06965 FT Em:H21060 Em:R25540 Em:Z44032" FT mRNA join(76362974..76363223,76369537..76369567, FT 76370772..76370885,76374820..76375018,76378425..76378561) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-006" FT /product="LIM domain 7" FT /note="match: cDNAs: Em:BF673109" FT mRNA join(AL137244.28:130582..132016,AL137244.28:133419..133468, FT 76287318..76287388,76301165..76301234,76335068..76335174, FT 76369537..76369567,76370772..76370885,76374820..76375018, FT 76378425..76378677,76383290..76383319, FT AL137121.8:6799..6916,AL359392.9:2014..2156, FT AL359392.9:3798..4230,AL359392.9:6186..6494, FT AL359392.9:15672..15786,AL359392.9:16847..17008, FT AL359392.9:17854..17960,AL359392.9:19018..19078, FT AL359392.9:20761..20817,AL359392.9:22706..22731, FT AL359392.9:23012..23116,AL359392.9:23730..23822, FT AL359392.9:24249..24604,AL359392.9:25472..25537, FT AL359392.9:27948..28000,AL359392.9:31700..31913, FT AL359392.9:35713..36009,AL359392.9:37881..37989, FT AL359392.9:39127..39229,AL359392.9:40542..42487) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-001" FT /product="LIM domain 7" FT /note="match: cDNAs: Em:AF330045.1" FT /note="match: ESTs: Em:AA777749.1 Em:AI768576.1 FT Em:BM997124.1 Em:BQ014473.1 Em:BQ775818.1 Em:BU634243.1 FT Em:BU742211.1" FT mRNA join(76378423..76378677,AL137121.8:6799..6871) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-007" FT /product="LIM domain 7" FT /note="match: ESTs: Em:AW009050" FT mRNA join(<76378456..76378677,76381616..76382335, FT 76383290..76383319,AL137121.8:6799..6916, FT AL359392.9:2014..2156,AL359392.9:3798..4230, FT AL359392.9:6186..6494,AL359392.9:15672..15786, FT AL359392.9:16847..17008,AL359392.9:17854..17960, FT AL359392.9:19018..19078,AL359392.9:20761..20817, FT AL359392.9:22706..22731,AL359392.9:23012..23116, FT AL359392.9:23730..23822,AL359392.9:24249..24604, FT AL359392.9:25472..25537,AL359392.9:27948..>27989) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-003" FT /product="LIM domain 7" FT /note="match: cDNAs: Em:AK055465" FT CDS join(<76378456..76378677,76381616..76382335, FT 76383290..76383319,AL137121.8:6799..6916, FT AL359392.9:2014..2156,AL359392.9:3798..4230, FT AL359392.9:6186..6494,AL359392.9:15672..15786, FT AL359392.9:16847..17008,AL359392.9:17854..17960, FT AL359392.9:19018..19078,AL359392.9:20761..20817, FT AL359392.9:22706..22731,AL359392.9:23012..23116, FT AL359392.9:23730..23822,AL359392.9:24249..24604, FT AL359392.9:25472..25537,AL359392.9:27948..>27989) FT /codon_start=2 FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-003" FT /standard_name="OTTHUMP00000018514" FT /product="LIM domain 7" FT /protein_id="CAI40006.2" FT /translation="FKMQDYNKDDMSYRRISAVEPKTALPFNRFLPNKSRQPSYVPAPL FT RKKKPDKHEDNRRSWASPVYTEADGTFSSQFLLLQALQTYSDDILSSETHTKIDPTSGP FT RLITRRKNLSYAPGYRRDDLEMAALDPDLENDDFFVRKTGAFHANPYVLRAFEDFRKFS FT EQDDSVERDIILQCREGELVLPDLEKDDMIVRRIPAQKKEVPLSGAPDRYHPVPFPEPW FT TLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQSWKLGTTVPPIS FT FTPGPCSEADLKRWEAIREASRLRHKKRLMVERLFQKIYGENGSKSMSDVSAEDVQNLR FT QLRYEEMQKIKSQLKEQDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSKR FT SSKTFKEMLQDRESQNQKSTVPSRRRMYSFDDVLEEGKRPPTMTVSEASYQSERVEEKG FT ATYPSEIPKEDSTTFAKREDRVTTEIQLPSQSPVEEQSPASLSSLRSRSTQMESTRVSA FT SLPRSYRKTDTVRLTSVVTPRPFGSQTRGISSLPRSYTMDDAWKYNGDVEDIKRTPNNV FT VSTPAPSPDASQLASSLSSQKEVAATEEDVTRLPSPTSPFSSLSQDQAATSKATLSSTS FT GLDLMSESGEGEISPQREVSRSQDQFSDMRISINQTPGKSLDFGFTIKWDIPGIFVASV FT EAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGKAGSP FT ETKWIDATSGIYNSEKSSNLSVTTDFSESLQSSNIESKEINGIHDESNAFESKASESIS FT LKNLKRRSQFFEQGSSDSVVPDLPVPTISAPSRWVWDQEEERKRQERWQKEQDRLLQEK FT YQREQEKLREEWQRAKQEAERENSKYLDEELMVLSSNSMSLTTREPSLATWEATWSEGS FT KSSDREGTRAGEEERRQPQEEVVHEDQGKKPQDQLVIERERKWEQQLQEEQEQKRLQAE FT AEEQKRPAEEQKRQAEIERETSVRIYQYRRPVDSYDIPKTEEASSGFLPGDRNKSRSTT FT ELDDYST" FT CDS join(AL137244.28:131842..132016,AL137244.28:133419..133468, FT 76287318..76287388,76301165..76301234,76335068..76335174, FT 76369537..76369567,76370772..76370885,76374820..76375018, FT 76378425..76378677,76383290..76383319, FT AL137121.8:6799..6916,AL359392.9:2014..2156, FT AL359392.9:3798..4230,AL359392.9:6186..6494, FT AL359392.9:15672..15786,AL359392.9:16847..17008, FT AL359392.9:17854..17960,AL359392.9:19018..19078, FT AL359392.9:20761..20817,AL359392.9:22706..22731, FT AL359392.9:23012..23116,AL359392.9:23730..23822, FT AL359392.9:24249..24604,AL359392.9:25472..25537, FT AL359392.9:27948..28000,AL359392.9:31700..31913, FT AL359392.9:35713..36009,AL359392.9:37881..37989, FT AL359392.9:39127..39229,AL359392.9:40542..40564) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-001" FT /standard_name="OTTHUMP00000018512" FT /product="LIM domain 7" FT /note="match: proteins: Tr:Q5TBK6.1" FT /protein_id="CAI40007.1" FT /translation="MKKIRICHIFTFYSWMSYDVLFQRTELGALEIWRQLICAHVCICV FT GWLYLRDRVCSKKDIILRTEQNSGRTILIKAVTEKNFETKDFRASLENGVLLCDLINKL FT KPGVIKKINRLSTPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVKQEETD FT RRVKNVLITLYWLGRKAQSNPYYNGPHLNLKAFENLLGQALTKALEDSSFLKRSGRDSG FT YGDIWCPERGEFLAPPRHHKREDSFESLDSLGSRSLTSCSSDITLRGGREGFESDTDSE FT FTFKMQDYNKDDMSYRRISAVEPKTALPFNRFLPNKSRQPSYVPAPLRKKKPDKHEDNR FT RSWASPVYTEADGTFSRLFQKIYGENGSKSMSDVSAEDVQNLRQLRYEEMQKIKSQLKE FT QDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSKRSSKTFKEMLQDRESQN FT QKSTVPSRRRMYSFDDVLEEGKRPPTMTVSEASYQSERVEEKGATYPSEIPKEDSTTFA FT KREDRVTTEIQLPSQSPVEEQSPASLSSLRSRSTQMESTRVSASLPRSYRKTDTVRLTS FT VVTPRPFGSQTRGISSLPRSYTMDDAWKYNGDVEDIKRTPNNVVSTPAPSPDASQLASS FT LSSQKEVAATEEDVTRLPSPTSPFSSLSQDQAATSKATLSSTSGLDLMSESGEGEISPQ FT REVSRSQDQFSDMRISINQTPGKSLDFGFTIKWDIPGIFVASVEAGSPAEFSQLQVDDE FT IIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGKAGSPETKWIDATSGIYNSEK FT SSNLSVTTDFSESLQSSNIESKEINGIHDESNAFESKASESISLKNLKRRSQFFEQGSS FT DSVVPDLPVPTISAPSRWVWDQEEERKRQERWQKEQDRLLQEKYQREQEKLREEWQRAK FT QEAERENSKYLDEELMVLSSNSMSLTTREPSLATWEATWSEGSKSSDREGTRAGEEERR FT QPQEEVVHEDQGKKPQDQLVIERERKWEQQLQEEQEQKRLQAEAEEQKRPAEEQKRQAE FT IERETSVRIYQYRRPVDSYDIPKTEEASSGFLPGDRNKSRSTTELDDYSTNKNGNNKYL FT DQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQRSASVNKEPVS FT LPGIMRRGESLDNLDSPRSNSWRQPPWLNQPTGFYASSSVQDFSRPPPQLVSTSNRAYM FT RNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSASQSGSQLRNRSVSGKRICSYCN FT NILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCNDCYLRFKS FT GRPTAM" FT misc_feature 76386398 FT /note="Clone_right_end: RP11-29G8" FT mRNA join(AL137244.28:146495..146874,76287318..76287388, FT 76301165..76301234,76335068..>76335124) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-004" FT /product="LIM domain 7" FT /note="match: ESTs: Em:BE270452" FT CDS join(AL137244.28:146806..146874,76287318..76287388, FT 76301165..76301234,76335068..>76335124) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-004" FT /standard_name="OTTHUMP00000018515" FT /product="LIM domain 7" FT /protein_id="CAI40008.1" FT /translation="MEGLEEAEANCSVAFAEAQRWVEAVTEKNFETKDFRASLENGVLL FT CDLINKLKPGVIKKINRLSTPIAGLDNINVFLKACEQIGLKEAQ" FT misc_feature 76386499..76393515 FT /note="annotated region of clone" FT misc_feature 76389516 FT /note="Clone_left_end: RP11-332E3" FT mRNA join(AL137782.9:87621..87928,AL137782.9:122291..122321, FT AL137782.9:123526..123639,AL137782.9:127574..127772, FT AL137782.9:131179..131431,AL137782.9:132369..132650, FT AL137782.9:134370..135089,AL137782.9:136044..136073, FT 76391297..76391414,AL359392.9:2014..2156, FT AL359392.9:3798..4230,AL359392.9:6186..6494, FT AL359392.9:15672..15786,AL359392.9:16847..17008, FT AL359392.9:17854..17960,AL359392.9:19018..19078, FT AL359392.9:20761..20817,AL359392.9:22706..22731, FT AL359392.9:23012..23116,AL359392.9:23730..23822, FT AL359392.9:24249..24604,AL359392.9:25472..25537, FT AL359392.9:27948..28000,AL359392.9:31700..31913, FT AL359392.9:35713..36009,AL359392.9:39127..39229, FT AL359392.9:40542..41296) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-002" FT /product="LIM domain 7" FT /note="match: cDNAs: Em:AB020665 Em:AF174600" FT /note="match: ESTs: Em:AI754378.1 Em:F05837 Em:H06965 FT Em:H21060 Em:R25540 Em:Z44032" FT mRNA join(AL137244.28:130582..132016,AL137244.28:133419..133468, FT AL137782.9:40072..40142,AL137782.9:53919..53988, FT AL137782.9:87822..87928,AL137782.9:122291..122321, FT AL137782.9:123526..123639,AL137782.9:127574..127772, FT AL137782.9:131179..131431,AL137782.9:136044..136073, FT 76391297..76391414,AL359392.9:2014..2156, FT AL359392.9:3798..4230,AL359392.9:6186..6494, FT AL359392.9:15672..15786,AL359392.9:16847..17008, FT AL359392.9:17854..17960,AL359392.9:19018..19078, FT AL359392.9:20761..20817,AL359392.9:22706..22731, FT AL359392.9:23012..23116,AL359392.9:23730..23822, FT AL359392.9:24249..24604,AL359392.9:25472..25537, FT AL359392.9:27948..28000,AL359392.9:31700..31913, FT AL359392.9:35713..36009,AL359392.9:37881..37989, FT AL359392.9:39127..39229,AL359392.9:40542..42487) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-001" FT /product="LIM domain 7" FT /note="match: cDNAs: Em:AF330045.1" FT /note="match: ESTs: Em:AA777749.1 Em:AI768576.1 FT Em:BM997124.1 Em:BQ014473.1 Em:BQ775818.1 Em:BU634243.1 FT Em:BU742211.1" FT mRNA join(AL137782.9:131177..131431,76391297..76391369) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-007" FT /product="LIM domain 7" FT /note="match: ESTs: Em:AW009050" FT mRNA join(AL137782.9:<131210..131431,AL137782.9:134370..135089, FT AL137782.9:136044..136073,76391297..76391414, FT AL359392.9:2014..2156,AL359392.9:3798..4230, FT AL359392.9:6186..6494,AL359392.9:15672..15786, FT AL359392.9:16847..17008,AL359392.9:17854..17960, FT AL359392.9:19018..19078,AL359392.9:20761..20817, FT AL359392.9:22706..22731,AL359392.9:23012..23116, FT AL359392.9:23730..23822,AL359392.9:24249..24604, FT AL359392.9:25472..25537,AL359392.9:27948..>27989) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-003" FT /product="LIM domain 7" FT /note="match: cDNAs: Em:AK055465" FT CDS join(AL137782.9:<131210..131431,AL137782.9:134370..135089, FT AL137782.9:136044..136073,76391297..76391414, FT AL359392.9:2014..2156,AL359392.9:3798..4230, FT AL359392.9:6186..6494,AL359392.9:15672..15786, FT AL359392.9:16847..17008,AL359392.9:17854..17960, FT AL359392.9:19018..19078,AL359392.9:20761..20817, FT AL359392.9:22706..22731,AL359392.9:23012..23116, FT AL359392.9:23730..23822,AL359392.9:24249..24604, FT AL359392.9:25472..25537,AL359392.9:27948..>27989) FT /codon_start=2 FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-003" FT /standard_name="OTTHUMP00000018514" FT /product="LIM domain 7" FT /protein_id="CAI39479.2" FT /translation="FKMQDYNKDDMSYRRISAVEPKTALPFNRFLPNKSRQPSYVPAPL FT RKKKPDKHEDNRRSWASPVYTEADGTFSSQFLLLQALQTYSDDILSSETHTKIDPTSGP FT RLITRRKNLSYAPGYRRDDLEMAALDPDLENDDFFVRKTGAFHANPYVLRAFEDFRKFS FT EQDDSVERDIILQCREGELVLPDLEKDDMIVRRIPAQKKEVPLSGAPDRYHPVPFPEPW FT TLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQSWKLGTTVPPIS FT FTPGPCSEADLKRWEAIREASRLRHKKRLMVERLFQKIYGENGSKSMSDVSAEDVQNLR FT QLRYEEMQKIKSQLKEQDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSKR FT SSKTFKEMLQDRESQNQKSTVPSRRRMYSFDDVLEEGKRPPTMTVSEASYQSERVEEKG FT ATYPSEIPKEDSTTFAKREDRVTTEIQLPSQSPVEEQSPASLSSLRSRSTQMESTRVSA FT SLPRSYRKTDTVRLTSVVTPRPFGSQTRGISSLPRSYTMDDAWKYNGDVEDIKRTPNNV FT VSTPAPSPDASQLASSLSSQKEVAATEEDVTRLPSPTSPFSSLSQDQAATSKATLSSTS FT GLDLMSESGEGEISPQREVSRSQDQFSDMRISINQTPGKSLDFGFTIKWDIPGIFVASV FT EAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGKAGSP FT ETKWIDATSGIYNSEKSSNLSVTTDFSESLQSSNIESKEINGIHDESNAFESKASESIS FT LKNLKRRSQFFEQGSSDSVVPDLPVPTISAPSRWVWDQEEERKRQERWQKEQDRLLQEK FT YQREQEKLREEWQRAKQEAERENSKYLDEELMVLSSNSMSLTTREPSLATWEATWSEGS FT KSSDREGTRAGEEERRQPQEEVVHEDQGKKPQDQLVIERERKWEQQLQEEQEQKRLQAE FT AEEQKRPAEEQKRQAEIERETSVRIYQYRRPVDSYDIPKTEEASSGFLPGDRNKSRSTT FT ELDDYST" FT CDS join(AL137244.28:131842..132016,AL137244.28:133419..133468, FT AL137782.9:40072..40142,AL137782.9:53919..53988, FT AL137782.9:87822..87928,AL137782.9:122291..122321, FT AL137782.9:123526..123639,AL137782.9:127574..127772, FT AL137782.9:131179..131431,AL137782.9:136044..136073, FT 76391297..76391414,AL359392.9:2014..2156, FT AL359392.9:3798..4230,AL359392.9:6186..6494, FT AL359392.9:15672..15786,AL359392.9:16847..17008, FT AL359392.9:17854..17960,AL359392.9:19018..19078, FT AL359392.9:20761..20817,AL359392.9:22706..22731, FT AL359392.9:23012..23116,AL359392.9:23730..23822, FT AL359392.9:24249..24604,AL359392.9:25472..25537, FT AL359392.9:27948..28000,AL359392.9:31700..31913, FT AL359392.9:35713..36009,AL359392.9:37881..37989, FT AL359392.9:39127..39229,AL359392.9:40542..40564) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-001" FT /standard_name="OTTHUMP00000018512" FT /product="LIM domain 7" FT /note="match: proteins: Tr:Q5TBK6.1" FT /protein_id="CAI39480.1" FT /translation="MKKIRICHIFTFYSWMSYDVLFQRTELGALEIWRQLICAHVCICV FT GWLYLRDRVCSKKDIILRTEQNSGRTILIKAVTEKNFETKDFRASLENGVLLCDLINKL FT KPGVIKKINRLSTPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVKQEETD FT RRVKNVLITLYWLGRKAQSNPYYNGPHLNLKAFENLLGQALTKALEDSSFLKRSGRDSG FT YGDIWCPERGEFLAPPRHHKREDSFESLDSLGSRSLTSCSSDITLRGGREGFESDTDSE FT FTFKMQDYNKDDMSYRRISAVEPKTALPFNRFLPNKSRQPSYVPAPLRKKKPDKHEDNR FT RSWASPVYTEADGTFSRLFQKIYGENGSKSMSDVSAEDVQNLRQLRYEEMQKIKSQLKE FT QDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSKRSSKTFKEMLQDRESQN FT QKSTVPSRRRMYSFDDVLEEGKRPPTMTVSEASYQSERVEEKGATYPSEIPKEDSTTFA FT KREDRVTTEIQLPSQSPVEEQSPASLSSLRSRSTQMESTRVSASLPRSYRKTDTVRLTS FT VVTPRPFGSQTRGISSLPRSYTMDDAWKYNGDVEDIKRTPNNVVSTPAPSPDASQLASS FT LSSQKEVAATEEDVTRLPSPTSPFSSLSQDQAATSKATLSSTSGLDLMSESGEGEISPQ FT REVSRSQDQFSDMRISINQTPGKSLDFGFTIKWDIPGIFVASVEAGSPAEFSQLQVDDE FT IIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGKAGSPETKWIDATSGIYNSEK FT SSNLSVTTDFSESLQSSNIESKEINGIHDESNAFESKASESISLKNLKRRSQFFEQGSS FT DSVVPDLPVPTISAPSRWVWDQEEERKRQERWQKEQDRLLQEKYQREQEKLREEWQRAK FT QEAERENSKYLDEELMVLSSNSMSLTTREPSLATWEATWSEGSKSSDREGTRAGEEERR FT QPQEEVVHEDQGKKPQDQLVIERERKWEQQLQEEQEQKRLQAEAEEQKRPAEEQKRQAE FT IERETSVRIYQYRRPVDSYDIPKTEEASSGFLPGDRNKSRSTTELDDYSTNKNGNNKYL FT DQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQRSASVNKEPVS FT LPGIMRRGESLDNLDSPRSNSWRQPPWLNQPTGFYASSSVQDFSRPPPQLVSTSNRAYM FT RNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSASQSGSQLRNRSVSGKRICSYCN FT NILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCNDCYLRFKS FT GRPTAM" FT misc_feature 76393516..76542003 FT /note="annotated region of clone" FT mRNA join(76397762..76398009,76407187..76407301, FT 76408362..76408523,76409288..76409475,76410533..76410593, FT 76412276..76412588) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-008" FT /product="LIM domain 7" FT /note="match: ESTs: Em:AW978522 Em:BG428956" FT mRNA join(76423112..76423428,76427228..76427524, FT 76429396..76429504,76430642..76430853) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-009" FT /product="LIM domain 7" FT /note="match: ESTs: Em:AW854401 Em:BG087095" FT mRNA join(76429085..76429504,76430642..76430812) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-010" FT /product="LIM domain 7" FT /note="match: ESTs: Em:AW806634" FT polyA_signal 76432545..76432550 FT polyA_site 76432563 FT polyA_site 76432567 FT polyA_signal 76432791..76432796 FT polyA_site 76432813 FT misc_feature 76433295..76433641 FT /note="Sequence from overlapping clone bA122K21 (AL137121). FT Assembly confirmed by restriction digest" FT polyA_site 76433650 FT polyA_signal 76433979..76433984 FT polyA_site 76434006 FT mRNA join(76452849..76452930,76453840..76453918, FT 76455182..76455263) FT /locus_tag="RP11-332E3.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI825938" FT mRNA join(AL137782.9:87621..87928,AL137782.9:122291..122321, FT AL137782.9:123526..123639,AL137782.9:127574..127772, FT AL137782.9:131179..131431,AL137782.9:132369..132650, FT AL137782.9:134370..135089,AL137782.9:136044..136073, FT AL137121.8:6799..6916,76393529..76393671, FT 76395313..76395745,76397701..76398009,76407187..76407301, FT 76408362..76408523,76409369..76409475,76410533..76410593, FT 76412276..76412332,76414221..76414246,76414527..76414631, FT 76415245..76415337,76415764..76416119,76416987..76417052, FT 76419463..76419515,76423215..76423428,76427228..76427524, FT 76430642..76430744,76432057..76432811) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-002" FT /product="LIM domain 7" FT /note="match: cDNAs: Em:AB020665 Em:AF174600" FT /note="match: ESTs: Em:AI754378.1 Em:F05837 Em:H06965 FT Em:H21060 Em:R25540 Em:Z44032" FT misc_feature 76501534 FT /note="Clone_right_end: RP11-122K21" FT mRNA join(AL137244.28:130582..132016,AL137244.28:133419..133468, FT AL137782.9:40072..40142,AL137782.9:53919..53988, FT AL137782.9:87822..87928,AL137782.9:122291..122321, FT AL137782.9:123526..123639,AL137782.9:127574..127772, FT AL137782.9:131179..131431,AL137782.9:136044..136073, FT AL137121.8:6799..6916,76393529..76393671, FT 76395313..76395745,76397701..76398009,76407187..76407301, FT 76408362..76408523,76409369..76409475,76410533..76410593, FT 76412276..76412332,76414221..76414246,76414527..76414631, FT 76415245..76415337,76415764..76416119,76416987..76417052, FT 76419463..76419515,76423215..76423428,76427228..76427524, FT 76429396..76429504,76430642..76430744,76432057..76434002) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-001" FT /product="LIM domain 7" FT /note="match: cDNAs: Em:AF330045.1" FT /note="match: ESTs: Em:AA777749.1 Em:AI768576.1 FT Em:BM997124.1 Em:BQ014473.1 Em:BQ775818.1 Em:BU634243.1 FT Em:BU742211.1" FT mRNA join(AL137782.9:<131210..131431,AL137782.9:134370..135089, FT AL137782.9:136044..136073,AL137121.8:6799..6916, FT 76393529..76393671,76395313..76395745,76397701..76398009, FT 76407187..76407301,76408362..76408523,76409369..76409475, FT 76410533..76410593,76412276..76412332,76414221..76414246, FT 76414527..76414631,76415245..76415337,76415764..76416119, FT 76416987..76417052,76419463..>76419504) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-003" FT /product="LIM domain 7" FT /note="match: cDNAs: Em:AK055465" FT CDS join(AL137782.9:<131210..131431,AL137782.9:134370..135089, FT AL137782.9:136044..136073,AL137121.8:6799..6916, FT 76393529..76393671,76395313..76395745,76397701..76398009, FT 76407187..76407301,76408362..76408523,76409369..76409475, FT 76410533..76410593,76412276..76412332,76414221..76414246, FT 76414527..76414631,76415245..76415337,76415764..76416119, FT 76416987..76417052,76419463..>76419504) FT /codon_start=2 FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-003" FT /standard_name="OTTHUMP00000018514" FT /product="LIM domain 7" FT /protein_id="CAI40208.2" FT /translation="FKMQDYNKDDMSYRRISAVEPKTALPFNRFLPNKSRQPSYVPAPL FT RKKKPDKHEDNRRSWASPVYTEADGTFSSQFLLLQALQTYSDDILSSETHTKIDPTSGP FT RLITRRKNLSYAPGYRRDDLEMAALDPDLENDDFFVRKTGAFHANPYVLRAFEDFRKFS FT EQDDSVERDIILQCREGELVLPDLEKDDMIVRRIPAQKKEVPLSGAPDRYHPVPFPEPW FT TLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQSWKLGTTVPPIS FT FTPGPCSEADLKRWEAIREASRLRHKKRLMVERLFQKIYGENGSKSMSDVSAEDVQNLR FT QLRYEEMQKIKSQLKEQDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSKR FT SSKTFKEMLQDRESQNQKSTVPSRRRMYSFDDVLEEGKRPPTMTVSEASYQSERVEEKG FT ATYPSEIPKEDSTTFAKREDRVTTEIQLPSQSPVEEQSPASLSSLRSRSTQMESTRVSA FT SLPRSYRKTDTVRLTSVVTPRPFGSQTRGISSLPRSYTMDDAWKYNGDVEDIKRTPNNV FT VSTPAPSPDASQLASSLSSQKEVAATEEDVTRLPSPTSPFSSLSQDQAATSKATLSSTS FT GLDLMSESGEGEISPQREVSRSQDQFSDMRISINQTPGKSLDFGFTIKWDIPGIFVASV FT EAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGKAGSP FT ETKWIDATSGIYNSEKSSNLSVTTDFSESLQSSNIESKEINGIHDESNAFESKASESIS FT LKNLKRRSQFFEQGSSDSVVPDLPVPTISAPSRWVWDQEEERKRQERWQKEQDRLLQEK FT YQREQEKLREEWQRAKQEAERENSKYLDEELMVLSSNSMSLTTREPSLATWEATWSEGS FT KSSDREGTRAGEEERRQPQEEVVHEDQGKKPQDQLVIERERKWEQQLQEEQEQKRLQAE FT AEEQKRPAEEQKRQAEIERETSVRIYQYRRPVDSYDIPKTEEASSGFLPGDRNKSRSTT FT ELDDYST" FT CDS join(AL137244.28:131842..132016,AL137244.28:133419..133468, FT AL137782.9:40072..40142,AL137782.9:53919..53988, FT AL137782.9:87822..87928,AL137782.9:122291..122321, FT AL137782.9:123526..123639,AL137782.9:127574..127772, FT AL137782.9:131179..131431,AL137782.9:136044..136073, FT AL137121.8:6799..6916,76393529..76393671, FT 76395313..76395745,76397701..76398009,76407187..76407301, FT 76408362..76408523,76409369..76409475,76410533..76410593, FT 76412276..76412332,76414221..76414246,76414527..76414631, FT 76415245..76415337,76415764..76416119,76416987..76417052, FT 76419463..76419515,76423215..76423428,76427228..76427524, FT 76429396..76429504,76430642..76430744,76432057..76432079) FT /gene="LMO7" FT /locus_tag="RP11-332E3.3-001" FT /standard_name="OTTHUMP00000018512" FT /product="LIM domain 7" FT /note="match: proteins: Tr:Q5TBK6.1" FT /protein_id="CAI40209.1" FT /translation="MKKIRICHIFTFYSWMSYDVLFQRTELGALEIWRQLICAHVCICV FT GWLYLRDRVCSKKDIILRTEQNSGRTILIKAVTEKNFETKDFRASLENGVLLCDLINKL FT KPGVIKKINRLSTPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVKQEETD FT RRVKNVLITLYWLGRKAQSNPYYNGPHLNLKAFENLLGQALTKALEDSSFLKRSGRDSG FT YGDIWCPERGEFLAPPRHHKREDSFESLDSLGSRSLTSCSSDITLRGGREGFESDTDSE FT FTFKMQDYNKDDMSYRRISAVEPKTALPFNRFLPNKSRQPSYVPAPLRKKKPDKHEDNR FT RSWASPVYTEADGTFSRLFQKIYGENGSKSMSDVSAEDVQNLRQLRYEEMQKIKSQLKE FT QDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSKRSSKTFKEMLQDRESQN FT QKSTVPSRRRMYSFDDVLEEGKRPPTMTVSEASYQSERVEEKGATYPSEIPKEDSTTFA FT KREDRVTTEIQLPSQSPVEEQSPASLSSLRSRSTQMESTRVSASLPRSYRKTDTVRLTS FT VVTPRPFGSQTRGISSLPRSYTMDDAWKYNGDVEDIKRTPNNVVSTPAPSPDASQLASS FT LSSQKEVAATEEDVTRLPSPTSPFSSLSQDQAATSKATLSSTSGLDLMSESGEGEISPQ FT REVSRSQDQFSDMRISINQTPGKSLDFGFTIKWDIPGIFVASVEAGSPAEFSQLQVDDE FT IIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGKAGSPETKWIDATSGIYNSEK FT SSNLSVTTDFSESLQSSNIESKEINGIHDESNAFESKASESISLKNLKRRSQFFEQGSS FT DSVVPDLPVPTISAPSRWVWDQEEERKRQERWQKEQDRLLQEKYQREQEKLREEWQRAK FT QEAERENSKYLDEELMVLSSNSMSLTTREPSLATWEATWSEGSKSSDREGTRAGEEERR FT QPQEEVVHEDQGKKPQDQLVIERERKWEQQLQEEQEQKRLQAEAEEQKRPAEEQKRQAE FT IERETSVRIYQYRRPVDSYDIPKTEEASSGFLPGDRNKSRSTTELDDYSTNKNGNNKYL FT DQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQRSASVNKEPVS FT LPGIMRRGESLDNLDSPRSNSWRQPPWLNQPTGFYASSSVQDFSRPPPQLVSTSNRAYM FT RNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSASQSGSQLRNRSVSGKRICSYCN FT NILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCNDCYLRFKS FT GRPTAM" FT misc_feature 76540003 FT /note="Clone_right_end: RP11-332E3" FT misc_feature 76542004..76629767 FT /note="annotated region of clone" FT mRNA join(76587159..76587292,76588495..76588637) FT /locus_tag="RP11-20O12.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG183202" FT misc_feature 76625768 FT /note="Clone_left_end: RP11-191M14" FT misc_feature 76651357 FT /note="Weak data" FT misc_feature 76677962 FT /note="Clone_left_end: RP11-408M7" FT misc_feature 76677967 FT /note="Clone_right_end: RP11-20O12" FT misc_feature 76758578 FT /note="Clone_left_end: RP11-443H16" FT misc_feature 76780830 FT /note="Clone_right_end: RP11-191M14" FT misc_feature 76847364 FT /note="Clone_right_end: RP11-408M7" FT misc_feature 76904752 FT /note="Sequence confirmed by AC027360 sequenced by FT Whitehead Institute\/MIT Centre for Genome Research" FT misc_feature 76904758..76904786 FT /note="Sequence cofirmed by AC027360 sequenced by Whitehead FT Institute\/MIT Centre for Genome Research" FT misc_feature 76904882..76904883 FT /note="Sequence confirmed by AC027360 sequenced by FT Whitehead Institute\/MIT Centre for Genome Research" FT misc_feature 76904905 FT /note="Sequence confirmed by AC027360 sequenced by FT Whitehead Institute\/MIT Centre for Genome Research" FT misc_feature 76918375..76918501 FT /note="Sequence confirmed by AC027360 sequenced by FT Whitehead Institute\/MIT Centre for Genome Research" FT misc_feature 76924165..76924449 FT /note="Sequence confirmed by AC027360 sequenced by FT Whitehead Institute\/MIT Centre for Genome Research" FT misc_feature 76924575..76924595 FT /note="Sequence confirmed by AC027360 sequenced by FT Whitehead Institute\/MIT Centre for Genome Research" FT misc_feature 76925171..76925249 FT /note="Sequence from AC027360 sequenced by Whitehead FT Institute\/MIT Centre for Genome Research" FT misc_feature 76925258..76925677 FT /note="Sequence from AC027360 sequenced by Whitehead FT Institute\/MIT Centre for Genome Research" FT misc_feature 76930639..76930641 FT /note="Sequence confirmed by AC027360 sequenced by FT Whitehead Institute\/MIT Centre for Genome Research" FT misc_feature 76939888 FT /note="Clone_right_end: RP11-443H16" FT misc_feature 76975666 FT /note="Clone_right_end: RP11-16G21" FT misc_feature 76983572..76983616 FT /note="Sequence from uni-directional primer reads and dGTP FT big dye terminator reads only" FT misc_feature 76983617..76983690 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 76983676 FT /note="Tandem repeat. Forced join. Gap size estimated to be FT 180bp by restriction digest" FT misc_feature 77056885 FT /note="Clone_left_end: RP11-19D22" FT misc_feature 77181815 FT /note="Clone_left_end: RP11-267P7" FT misc_feature 77239776 FT /note="Clone_right_end: RP11-19D22" FT misc_feature 77288599 FT /note="Clone_left_end: RP11-275D4" FT misc_feature 77343396 FT /note="Clone_right_end: RP11-267P7" FT misc_feature 77400239..77400365 FT /note="Sequence from uni-directional dGTP big dye FT terminator reads only" FT misc_feature 77427243 FT /note="Clone_left_end: RP11-362P20" FT misc_feature 77448410 FT /note="Clone_left_end: XX-AC000403" FT repeat_region 77452370..77452455 FT /rpt_family="MIR2" FT repeat_region complement(77459704..77459724) FT /rpt_family="GC_rich" FT repeat_region complement(77459848..77459906) FT /rpt_family="GC_rich" FT repeat_region complement(77460227..77460248) FT /rpt_family="GC_rich" FT repeat_region complement(77460390..77460443) FT /rpt_family="(CGG)n" FT repeat_region 77462993..77463128 FT /rpt_family="MIR2" FT repeat_region complement(77463139..77463247) FT /rpt_family="MIR2" FT repeat_region complement(77464215..77464936) FT /rpt_family="MER44C" FT repeat_region 77465475..77465615 FT /rpt_family="AluSg" FT repeat_region complement(77465781..77466014) FT /rpt_family="MIR" FT repeat_region complement(77466057..77466145) FT /rpt_family="MIR" FT repeat_region complement(77466314..77466516) FT /rpt_family="L1PA15" FT repeat_region 77468009..77468143 FT /rpt_family="MIR" FT repeat_region complement(77468876..77468905) FT /rpt_family="MIR2" FT repeat_region complement(77469989..77470335) FT /rpt_family="MLT1A2" FT repeat_region complement(77470315..77471878) FT /rpt_family="TIGGER2" FT repeat_region complement(77471895..77473384) FT /rpt_family="THE1B-INTERNAL" FT repeat_region complement(77473385..77473747) FT /rpt_family="THE1B" FT repeat_region 77474391..77474637 FT /rpt_family="L1MC2" FT repeat_region complement(77475054..77475139) FT /rpt_family="MIR2" FT repeat_region 77476895..77476977 FT /rpt_family="(TGAA)n" FT repeat_region complement(77479526..77479780) FT /rpt_family="MLT1E" FT repeat_region complement(77479842..77479961) FT /rpt_family="MLT2FA" FT repeat_region complement(77479964..77480078) FT /rpt_family="MLT1E" FT repeat_region 77480486..77480520 FT /rpt_family="MER7B" FT repeat_region complement(77481182..77481226) FT /rpt_family="AT_rich" FT repeat_region complement(77481305..77481346) FT /rpt_family="AT_rich" FT repeat_region 77482235..77482536 FT /rpt_family="AluY" FT repeat_region complement(77482672..77482704) FT /rpt_family="(GA)n" FT repeat_region 77482704..77482737 FT /rpt_family="(CA)n" FT repeat_region 77483068..77483171 FT /rpt_family="AluJo" FT repeat_region 77483598..77483663 FT /rpt_family="MER5A" FT repeat_region 77483741..77484043 FT /rpt_family="AluJb" FT repeat_region 77484169..77484284 FT /rpt_family="MER5A" FT repeat_region complement(77485498..77485567) FT /rpt_family="MLT1A2" FT repeat_region complement(77485562..77485664) FT /rpt_family="MLT1A2" FT repeat_region complement(77485873..77485976) FT /rpt_family="L1PA16" FT repeat_region complement(77486183..77486353) FT /rpt_family="MER20" FT repeat_region complement(77486464..77486765) FT /rpt_family="AluSx" FT repeat_region 77487471..77487774 FT /rpt_family="AluSx" FT repeat_region complement(77487855..77487918) FT /rpt_family="MIR" FT repeat_region 77488877..77488919 FT /rpt_family="MER25" FT repeat_region 77488893..77489128 FT /rpt_family="L1" FT repeat_region 77489660..77489785 FT /rpt_family="MIR" FT repeat_region complement(77489847..77489877) FT /rpt_family="AT_rich" FT repeat_region complement(77489925..77490216) FT /rpt_family="AluJo" FT repeat_region 77490768..77491489 FT /rpt_family="TIGGER1" FT repeat_region 77491498..77491911 FT /rpt_family="MER25" FT repeat_region 77492046..77492363 FT /rpt_family="MER25" FT repeat_region 77492367..77492439 FT /rpt_family="MER25" FT repeat_region 77492427..77493389 FT /rpt_family="MER25" FT repeat_region 77493102..77493991 FT /rpt_family="L1" FT repeat_region 77493979..77494209 FT /rpt_family="L1" FT repeat_region 77494074..77494945 FT /rpt_family="L1PB1" FT repeat_region 77494962..77495554 FT /rpt_family="TIGGER1" FT repeat_region complement(77495555..77495852) FT /rpt_family="AluSx" FT repeat_region 77495853..77495969 FT /rpt_family="TIGGER1" FT repeat_region complement(77496019..77496121) FT /rpt_family="MSTC" FT repeat_region complement(77496040..77496146) FT /rpt_family="MLT1A2" FT repeat_region 77499243..77499340 FT /rpt_family="MIR2" FT repeat_region 77501138..77501180 FT /rpt_family="POLY_A" FT repeat_region 77501226..77501587 FT /rpt_family="L1PA9" FT repeat_region complement(77501881..77502083) FT /rpt_family="MER28" FT repeat_region complement(77502299..77502597) FT /rpt_family="TIGGER2" FT repeat_region complement(77503228..77503260) FT /rpt_family="(CA)n" FT repeat_region 77503255..77503336 FT /rpt_family="(CATA)n" FT repeat_region complement(77503337..77503512) FT /rpt_family="TIGGER2" FT repeat_region complement(77503521..77503877) FT /rpt_family="THE1B" FT repeat_region complement(77503881..77504011) FT /rpt_family="TIGGER2" FT repeat_region complement(77504508..77505855) FT /rpt_family="TIGGER2" FT repeat_region 77505851..77506131 FT /rpt_family="L1PA8" FT repeat_region complement(77506155..77506542) FT /rpt_family="TIGGER2" FT repeat_region complement(77506535..77506903) FT /rpt_family="TIGGER2" FT repeat_region 77507058..77507214 FT /rpt_family="MIR" FT repeat_region 77507588..77507893 FT /rpt_family="AluSg" FT repeat_region complement(77508416..77508522) FT /rpt_family="MER5A" FT repeat_region 77508536..77508720 FT /rpt_family="MER5A" FT repeat_region 77509232..77509442 FT /rpt_family="MIR" FT repeat_region complement(77509806..77509969) FT /rpt_family="MER5B" FT repeat_region complement(77510098..77510402) FT /rpt_family="AluSx" FT repeat_region 77511251..77511569 FT /rpt_family="MLT2CA" FT repeat_region 77511251..77511713 FT /rpt_family="MLT2FA" FT repeat_region complement(77514275..77514337) FT /rpt_family="(GA)n" FT repeat_region 77514380..77514698 FT /rpt_family="MER39" FT repeat_region complement(77514718..77515011) FT /rpt_family="AluJb" FT repeat_region 77515027..77515076 FT /rpt_family="MER39" FT repeat_region 77515372..77515711 FT /rpt_family="AluSx" FT repeat_region 77515933..77516071 FT /rpt_family="AluJo" FT repeat_region 77518191..77518411 FT /rpt_family="AluSq" FT repeat_region 77518416..77518465 FT /rpt_family="(GAAAA)n" FT repeat_region 77519106..77519405 FT /rpt_family="AluSx" FT repeat_region complement(77519480..77519576) FT /rpt_family="MIR2" FT repeat_region 77519725..77520360 FT /rpt_family="PABL" FT repeat_region complement(77520391..77520490) FT /rpt_family="AluJb" FT repeat_region complement(77520539..77520739) FT /rpt_family="MER20" FT repeat_region 77520750..77520834 FT /rpt_family="(GAAAA)n" FT repeat_region 77521001..77521229 FT /rpt_family="MLT2G" FT repeat_region complement(77521897..77522202) FT /rpt_family="AluJo" FT repeat_region 77523003..77523110 FT /rpt_family="MIR2" FT repeat_region 77523079..77523110 FT /rpt_family="MIR" FT repeat_region 77523119..77523412 FT /rpt_family="AluY" FT repeat_region complement(77525240..77525368) FT /rpt_family="MER33" FT repeat_region complement(77525374..77525670) FT /rpt_family="AluSq" FT repeat_region complement(77525688..77525850) FT /rpt_family="MER33" FT repeat_region complement(77525859..77526012) FT /rpt_family="MER5A" FT repeat_region 77526081..77526234 FT /rpt_family="MIR" FT repeat_region 77526991..77527295 FT /rpt_family="AluJb" FT repeat_region complement(77527913..77527961) FT /rpt_family="MIR" FT repeat_region complement(77528205..77528233) FT /rpt_family="MIR2" FT repeat_region 77528650..77528702 FT /rpt_family="MER42c" FT repeat_region 77528982..77529281 FT /rpt_family="AluSg" FT repeat_region complement(77530232..77530339) FT /rpt_family="MIR" FT repeat_region complement(77530340..77530634) FT /rpt_family="AluSc" FT repeat_region complement(77530648..77530947) FT /rpt_family="AluSx" FT repeat_region complement(77530948..77531091) FT /rpt_family="MIR" FT repeat_region 77532575..77532675 FT /rpt_family="MIR" FT repeat_region complement(77532967..77533355) FT /rpt_family="THE1C" FT repeat_region complement(77533356..77534959) FT /rpt_family="THE1B-INTERNAL" FT repeat_region complement(77534960..77535336) FT /rpt_family="THE1C" FT repeat_region 77535440..77535731 FT /rpt_family="AluJo" FT repeat_region complement(77535907..77536685) FT /rpt_family="L1MB8" FT repeat_region complement(77536707..77536805) FT /rpt_family="L1" FT repeat_region 77537399..77537560 FT /rpt_family="AluJo" FT repeat_region 77537561..77538300 FT /rpt_family="L1PA2" FT repeat_region 77538302..77538373 FT /rpt_family="(TAAAA)n" FT repeat_region complement(77538393..77538452) FT /rpt_family="AT_rich" FT repeat_region complement(77539031..77539334) FT /rpt_family="AluSx" FT repeat_region complement(77539335..77539560) FT /rpt_family="AluJb" FT repeat_region complement(77540771..77541822) FT /rpt_family="L1" FT repeat_region complement(77542839..77542926) FT /rpt_family="THE1B" FT repeat_region complement(77542928..77543337) FT /rpt_family="L1PA3" FT repeat_region complement(77543400..77543420) FT /rpt_family="AT_rich" FT repeat_region complement(77543561..77543707) FT /rpt_family="MIR2" FT repeat_region 77544358..77544646 FT /rpt_family="AluJo" FT repeat_region 77544696..77544997 FT /rpt_family="AluSp" FT repeat_region 77545505..77545672 FT /rpt_family="FAM" FT repeat_region 77546278..77546554 FT /rpt_family="AluJb" FT repeat_region 77547087..77547366 FT /rpt_family="AluSg" FT repeat_region 77547979..77548111 FT /rpt_family="MLT1F" FT repeat_region 77548640..77548832 FT /rpt_family="MLT1F" FT repeat_region complement(77549067..77549161) FT /rpt_family="MER34" FT repeat_region complement(77549564..77549866) FT /rpt_family="AluSx" FT repeat_region 77550120..77550181 FT /rpt_family="MER5A" FT repeat_region 77550190..77550353 FT /rpt_family="MER5B" FT repeat_region complement(77550350..77550518) FT /rpt_family="MER5B" FT repeat_region complement(77551089..77551117) FT /rpt_family="AT_rich" FT repeat_region 77551206..77551365 FT /rpt_family="MER5B" FT repeat_region complement(77551925..77552012) FT /rpt_family="(TA)n" FT repeat_region 77552066..77552370 FT /rpt_family="AluJo" FT repeat_region 77552606..77552672 FT /rpt_family="MIR2" FT repeat_region 77552934..77553513 FT /rpt_family="L1MB3" FT repeat_region 77553710..77554023 FT /rpt_family="AluSq" FT repeat_region 77554037..77554196 FT /rpt_family="L1PA8" FT repeat_region complement(77554197..77554221) FT /rpt_family="AT_rich" FT repeat_region complement(77555120..77555166) FT /rpt_family="AT_rich" FT repeat_region 77556508..77556647 FT /rpt_family="MIR" FT repeat_region 77556761..77557042 FT /rpt_family="AluSx" FT repeat_region complement(77557744..77557772) FT /rpt_family="AT_rich" FT repeat_region 77557806..77558099 FT /rpt_family="AluJb" FT repeat_region 77558314..77558607 FT /rpt_family="AluJo" FT repeat_region complement(77560764..77560797) FT /rpt_family="(CAT)n" FT repeat_region complement(77563115..77563220) FT /rpt_family="FAM" FT repeat_region 77563964..77564260 FT /rpt_family="AluSx" FT repeat_region complement(77566057..77566079) FT /rpt_family="GC_rich" FT repeat_region complement(77566272..77566304) FT /rpt_family="GC_rich" FT repeat_region 77567291..77567433 FT /rpt_family="MIR" FT repeat_region 77568739..77568773 FT /rpt_family="MIR2" FT repeat_region complement(77570443..77571258) FT /rpt_family="L1PB1" FT repeat_region complement(77571279..77571580) FT /rpt_family="AluSq" FT repeat_region complement(77571586..77571802) FT /rpt_family="L1" FT repeat_region complement(77572091..77572287) FT /rpt_family="MIR" FT repeat_region complement(77572776..77572873) FT /rpt_family="MIR" FT repeat_region 77574213..77574538 FT /rpt_family="AluJo" FT repeat_region complement(77576355..77576458) FT /rpt_family="MIR" FT repeat_region 77577160..77577455 FT /rpt_family="AluSx" FT repeat_region 77577796..77578087 FT /rpt_family="AluSx" FT repeat_region complement(77579163..77579187) FT /rpt_family="AT_rich" FT repeat_region complement(77582693..77582987) FT /rpt_family="AluSx" FT repeat_region complement(77583467..77583641) FT /rpt_family="AluSg" FT repeat_region 77583689..77584389 FT /rpt_family="L1PA2" FT repeat_region 77584768..77585078 FT /rpt_family="MLT1E" FT repeat_region 77585193..77585497 FT /rpt_family="AluSq" FT repeat_region 77585498..77585574 FT /rpt_family="L1MB8" FT repeat_region 77585575..77585877 FT /rpt_family="AluJb" FT repeat_region 77585878..77586044 FT /rpt_family="L1MA10" FT repeat_region 77585979..77586153 FT /rpt_family="L1MB8" FT repeat_region 77586155..77586398 FT /rpt_family="L1MB8" FT repeat_region complement(77586914..77587207) FT /rpt_family="AluSc" FT repeat_region 77587270..77587972 FT /rpt_family="LTR8" FT repeat_region complement(77589725..77589758) FT /rpt_family="AT_rich" FT repeat_region complement(77590137..77590157) FT /rpt_family="AT_rich" FT repeat_region complement(77590338..77590410) FT /rpt_family="(CATA)n" FT repeat_region complement(77590672..77590965) FT /rpt_family="AluJo" FT repeat_region complement(77592553..77592598) FT /rpt_family="AT_rich" FT repeat_region complement(77592886..77592912) FT /rpt_family="AT_rich" FT repeat_region 77593678..77593847 FT /rpt_family="MER5A" FT repeat_region complement(77594866..77595010) FT /rpt_family="AluJo" FT repeat_region 77596498..77596700 FT /rpt_family="MER1B" FT repeat_region 77596951..77597074 FT /rpt_family="MIR" FT repeat_region complement(77597259..77597305) FT /rpt_family="(TGAA)n" FT repeat_region complement(77597306..77597462) FT /rpt_family="AluJb" FT repeat_region complement(77597481..77597508) FT /rpt_family="(CA)n" FT repeat_region 77599580..77599842 FT /rpt_family="AluJb" FT repeat_region complement(77600797..77600893) FT /rpt_family="(CGGG)n" FT repeat_region complement(77600835..77600891) FT /rpt_family="POLY_G" FT repeat_region complement(77601045..77601103) FT /rpt_family="GC_rich" FT repeat_region complement(77601300..77601432) FT /rpt_family="GC_rich" FT repeat_region complement(77601641..77601666) FT /rpt_family="GC_rich" FT repeat_region 77602300..77602606 FT /rpt_family="AluJo" FT repeat_region complement(77603456..77603889) FT /rpt_family="L1MC3" FT repeat_region complement(77603989..77604073) FT /rpt_family="(TAAAA)n" FT repeat_region 77604418..77604725 FT /rpt_family="AluJo" FT repeat_region 77604832..77605094 FT /rpt_family="AluJb" FT repeat_region 77605796..77605947 FT /rpt_family="MLT1-INTERNAL" FT repeat_region 77605965..77606427 FT /rpt_family="MLT1F" FT repeat_region complement(77606636..77606723) FT /rpt_family="AT_rich" FT repeat_region complement(77606892..77607014) FT /rpt_family="FLAM_A" FT repeat_region complement(77607191..77607268) FT /rpt_family="MER46" FT repeat_region complement(77607447..77607537) FT /rpt_family="MER46" FT repeat_region 77607741..77608044 FT /rpt_family="AluSx" FT repeat_region 77609458..77609536 FT /rpt_family="MIR" FT repeat_region 77609548..77609701 FT /rpt_family="AluJo" FT repeat_region 77609704..77609822 FT /rpt_family="MIR" FT repeat_region 77611340..77611709 FT /rpt_family="MSTA" FT repeat_region complement(77612559..77612861) FT /rpt_family="AluSq" FT repeat_region complement(77612862..77613111) FT /rpt_family="L1ME3" FT repeat_region complement(77613427..77613610) FT /rpt_family="MER33" FT repeat_region complement(77613702..77614196) FT /rpt_family="MLT1D" FT repeat_region complement(77615429..77615601) FT /rpt_family="MER46" FT repeat_region 77616296..77616574 FT /rpt_family="AluSx" FT repeat_region 77617767..77618058 FT /rpt_family="AluSx" FT repeat_region 77618213..77618511 FT /rpt_family="AluJo" FT repeat_region complement(77618573..77618613) FT /rpt_family="(TA)n" FT repeat_region complement(77620303..77620332) FT /rpt_family="AT_rich" FT repeat_region 77620657..77620731 FT /rpt_family="MIR" FT repeat_region complement(77621163..77621227) FT /rpt_family="MIR2" FT repeat_region complement(77621323..77621431) FT /rpt_family="MIR" FT repeat_region 77621432..77621516 FT /rpt_family="MIR" FT repeat_region 77621575..77621620 FT /rpt_family="MLT1A1" FT repeat_region 77622067..77622196 FT /rpt_family="LTR9" FT repeat_region 77622233..77622538 FT /rpt_family="MLT1A1" FT repeat_region 77622737..77622861 FT /rpt_family="MIR" FT repeat_region complement(77623780..77624070) FT /rpt_family="AluSx" FT repeat_region complement(77625752..77625772) FT /rpt_family="AT_rich" FT repeat_region complement(77626254..77626331) FT /rpt_family="(GGAA)n" FT repeat_region complement(77626335..77626632) FT /rpt_family="AluJb" FT repeat_region 77626982..77627292 FT /rpt_family="AluJo" FT repeat_region complement(77627379..77627426) FT /rpt_family="AT_rich" FT repeat_region complement(77627958..77627991) FT /rpt_family="(TGAA)n" FT repeat_region complement(77628737..77629035) FT /rpt_family="AluJo" FT repeat_region 77629268..77629331 FT /rpt_family="POLY_A" FT repeat_region complement(77630227..77630294) FT /rpt_family="(CA)n" FT repeat_region complement(77631972..77632274) FT /rpt_family="AluY" FT repeat_region 77632840..77633139 FT /rpt_family="AluSg" FT repeat_region complement(77635023..77635114) FT /rpt_family="MIR" FT repeat_region complement(77635496..77635525) FT /rpt_family="AT_rich" FT repeat_region complement(77636628..77636665) FT /rpt_family="(CAAA)n" FT repeat_region 77637411..77637713 FT /rpt_family="AluSp" FT repeat_region 77637868..77637959 FT /rpt_family="(GAAA)n" FT repeat_region 77638690..77638745 FT /rpt_family="(CAAAA)n" FT repeat_region complement(77639070..77639099) FT /rpt_family="AT_rich" FT repeat_region complement(77642062..77642223) FT /rpt_family="FRAM" FT repeat_region 77643476..77643673 FT /rpt_family="AluYa5" FT repeat_region 77643726..77644015 FT /rpt_family="AluY" FT repeat_region complement(77644441..77644669) FT /rpt_family="MER30" FT repeat_region 77644684..77644740 FT /rpt_family="(CAAA)n" FT repeat_region complement(77644935..77644979) FT /rpt_family="AT_rich" FT repeat_region complement(77645352..77645447) FT /rpt_family="(TA)n" FT repeat_region 77645401..77645444 FT /rpt_family="(CA)n" FT repeat_region complement(77645448..77645524) FT /rpt_family="MIR" FT repeat_region 77646142..77646445 FT /rpt_family="AluY" FT repeat_region 77646497..77646924 FT /rpt_family="L1" FT repeat_region complement(77647128..77647288) FT /rpt_family="L1MB6" FT repeat_region 77647417..77647470 FT /rpt_family="7SLRNA" FT repeat_region 77647466..77648609 FT /rpt_family="L1" FT repeat_region 77648676..77649061 FT /rpt_family="L1ME1" FT repeat_region 77649062..77649360 FT /rpt_family="AluJb" FT repeat_region 77649365..77649465 FT /rpt_family="L1ME1" FT misc_feature 77649715..77722508 FT /note="annotated region of clone" FT mRNA complement(join(77718254..77718693,77720295..77720350, FT AL159154.16:2461..2505)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-004" FT /product="novel protein" FT /note="match: ESTs: Em:BF361171.1" FT mRNA join(77654646..77654805,77655060..77655325) FT /locus_tag="RP11-226E21.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AW265333.1" FT mRNA complement(join(AC001226.1:76311..76902, FT AC001226.1:82406..82571,AC001226.1:83220..83327, FT AC001226.1:86967..87176,AC001226.1:88395..88502, FT AC001226.1:89627..89815,AC001226.1:90932..91035, FT AC001226.1:92578..92710,AC001226.1:93071..93199, FT AC001226.1:94005..94106,AC001226.1:96024..96143, FT AC001226.1:97401..97497,AC001226.1:98990..99273, FT AC001226.1:99974..100240,AC001226.1:102040..102120, FT 77650895..77650984,77651283..77651522,77652959..77653024, FT 77655562..77655786,77655972..77656128,77657167..77657327, FT 77661619..>77661649)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-002" FT /product="novel protein" FT /note="match: cDNAs: Em:AK025250.1" FT /note="match: ESTs: Em:AW489798.1 Em:BM146792.1 FT Em:BQ443874.1" FT CDS complement(join(AC001226.1:76787..76902, FT AC001226.1:82406..82571,AC001226.1:83220..83327, FT AC001226.1:86967..87176,AC001226.1:88395..88502, FT AC001226.1:89627..89815,AC001226.1:90932..91035, FT AC001226.1:92578..92710,AC001226.1:93071..93199, FT AC001226.1:94005..94106,AC001226.1:96024..96143, FT AC001226.1:97401..97497,AC001226.1:98990..99273, FT AC001226.1:99974..100240,AC001226.1:102040..102120, FT 77650895..77650984,77651283..77651522,77652959..77653024, FT 77655562..77655786,77655972..77656128,77657167..77657327, FT 77661619..>77661649)) FT /codon_start=2 FT /gene="AC001226.5" FT /locus_tag="AC001226.5-002" FT /standard_name="OTTHUMP00000018524" FT /product="novel protein" FT /protein_id="CAI39758.1" FT /translation="NKTSKENSEQEKDTRVCEHPLSDIVIAGEAAHPLPHTFHRLLQTI FT SDLMMSLPSGSSLQQMALRCWSLKFKQSDHQFLHQSNVFHHINNILSKSDDGDSEESFS FT ISIQSGFEAMSQELCIVMCLKDLTSIVDIKTSSRPAMIGSLTDGSTETFWESGDEDKNK FT TKNITINCVKGINARYVSVHVDNSRDLGNKVTSMTFLTGKAVEDLCRIKQVDLDSRHIG FT WVTSELPGGDNHIIKIELKGPENTLRVRQVKVLGWKDGESTKIAGQISASVAQQRNCEA FT ETLRVFRLITSQVFGKLISGDAEPTPEQEEKALLSSPEGEEKATSDADLKEHMVGIIFS FT RSKLTNLQKQVCAHIVQAIRMEATRVREEWEHAISSKENANSQPNDEDASSDAYCFELL FT SMVLALSGSNVGRQYLAQQLTLLQDLFSLLHTASPRVQRQVTSLLRRVLPEVTPSRLAS FT IIGVKSLPPADISDIIHSTEKGDWNKLGILDMFLGCIAKALTVQLKAKGTTITGTAGTT FT VGKGVTTVTLPMIFNSSYLRRGESHWWMKGSTPTQISEIIIKLIKDMAAGHLSEAWSRV FT TKNAIAETIIALTKMEEEFRSPVRCIATTRLWLALASLCVLDQDHVDRLSSGRWMGKDG FT QQKQMPMCDNHDDGETAAIILCNVCGNLCTDCDRFLHLHRRTKTHQRQVFKEEEEAIKV FT DLHEGCGRTKLFWLMALADSKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVG FT SVCSDADCQEYAKIACSKTHPCGHPCGGVKNEEHCLPCLHGCDKSATSLKQDADDMCMI FT CFTEALSAAPAIQLDCSHIFHLQCCRRVLENRWLGPRITFGFISCPICKNKINHIVLKD FT LLDPIKELYEDVRRKALMRLEYEGLHKSEAITTPGVRFYNDPAGYAMNRYAYYVCYKCR FT KAYFGGEARCDAEAGRGDDYDPRELICGACSDVSRAQMCPKHGTDFLEYKCRYCCSVAV FT FFCFGTTHFCNACHDDFQRMTSIPKEELPHCPAGPKGKQLEGTECPLHVVHPPTGEEFA FT LGCGVCRNAHTF" FT polyA_signal 77661888..77661893 FT polyA_site 77661913 FT mRNA complement(join(77667422..77667465,77669664..77669735, FT 77670445..77670614,77671503..77671763)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-008" FT /product="novel protein" FT /note="match: ESTs: Em:BG013046.1" FT CDS complement(join(AC001226.1:76787..76902, FT AC001226.1:82406..82571,AC001226.1:83220..83327, FT AC001226.1:86967..87176,AC001226.1:88395..88502, FT AC001226.1:89627..89815,AC001226.1:90932..91035, FT AC001226.1:92578..92710,AC001226.1:93071..93199, FT AC001226.1:94005..94106,AC001226.1:96024..96143, FT AC001226.1:97401..97497,AC001226.1:98990..99273, FT AC001226.1:99974..100240,AC001226.1:102040..102120, FT 77650886..77650984,77651283..77651522,77652959..77653024, FT 77655562..77655786,77655972..77656128,77657167..77657327, FT 77661619..77661768,77662967..77663166,77664241..77664398, FT 77667300..77667467,77669493..77669737,77670447..77670616, FT 77671505..77673148,77695508..77695630,77699471..77699603, FT 77700453..77700677,77713331..77713471,77714182..77714298, FT 77714981..77715078,77718580..77718695,77720297..77720352, FT AL159154.16:2461..2676,AL159154.16:7785..7929, FT AL159154.16:9664..9836,AL159154.16:13633..13682, FT AL159154.16:16181..16268,AL159154.16:17000..17118, FT AL159154.16:18056..18281,AL159154.16:20155..20373, FT AL159154.16:21341..21441,AL159154.16:23219..23361, FT AL159154.16:26038..26216,AL159154.16:28224..28355, FT AL159154.16:29475..29681,AL159154.16:31854..32045, FT AL159154.16:33428..33649,AL159154.16:36830..37104, FT AL159154.16:37598..37790,AL159154.16:40678..40774, FT AL159154.16:41979..42062,AL159154.16:43406..43540, FT AL159154.16:45880..45971,AL159154.16:56983..57110, FT AL159154.16:57200..57325,AL159154.16:58380..58552, FT AL159154.16:62894..63047,AL159154.16:63683..63887, FT AL159154.16:69567..69684,AL159154.16:76178..76259, FT AL159154.16:77162..77281,AL159154.16:84883..84990, FT AL159154.16:94786..94887,AL159154.16:95533..95678, FT AL159154.16:102878..103082,AL159154.16:109398..109556, FT AL159154.16:112155..112319,AL159154.16:112898..113102, FT AL159154.16:113780..113856,AL159154.16:115378..115516, FT AL159154.16:115656..115729,AL159154.16:119568..119664, FT AL159154.16:121719..121790,AL159154.16:122023..122265, FT AL159158.12:335..531,AL159158.12:5621..5774, FT AL159158.12:15024..15239,AL159158.12:23462..23537, FT AL159158.12:53337..53524)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-001" FT /standard_name="OTTHUMP00000018523" FT /product="novel protein" FT /note="match: proteins: Sw:O75592 Sw:O75592" FT /protein_id="CAI39759.1" FT /translation="MPVPDGSVAAAGLGLGLPAADSRGHYQLLLSGRALADRYRRIYTA FT ALNDRDQGGGSAGHPASRNKKILNKKKLKRKQKSKSKVKTRSKSENLENTVIIPDIKLH FT SNPSAFNIYCNVRHCVLEWQKKEISLAAASKNSVQSGESDSDEEEESKEPPIKLPKIIE FT VGLCEVFELIKETRFSHPSLCLRSLQALLNVLQGQQPEGLQSEPPEVLESLFQLLLEIT FT VRSTGMNDSTGQSLTALSCACLFSLVASWGETGRTLQAISAILTNNGSHACQTIQVPTI FT LNSLQRSVQAVLVGKIQIQDWFSNGIKKAALMHKWPLKEISVDEDDQCLLQNDGFFLYL FT LCKDGLYKIGSGYSGTVRGHIYNSTSRIRNRKEKKSWLGYAQGYLLYRDVNNHSMTAIR FT ISPETLEQDGTVMLPDCHTEGQNILFTDGEYINQIAASRDDGFVVRIFATSTEPVLQQE FT LQLKLARKCLHACGISLFDLEKDLHIISTGFDEESAILGAGREFALMKTANGKIYYTGK FT YQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGED FT GESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSS FT LVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENM FT ATAMDEDLEEELDEKDEKSMMCPPGMHKWKLEQCMVCTVCGDCTGYGASCVSSGRPDRV FT PGGICGCGSGESGCAVCGCCKACARELDGQEARQRGILDAVKEMIPLDLLLAVPVPGVN FT IEEHLQLRQEEKRQRVIRRHRLEEGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRD FT KHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQ FT HGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGRPI FT LDVPYWNAKPAPMPNIGSKYGRKATWIGASGDQTFLRIDEALINSHVLATSEIFASKHI FT IGLVPASISEPPPFKCLLINKVDGSCKTFNDSEQEDLQGFGVCLDPVYDVIWRFRPNTR FT ELWCYNAVVADARLPSAADMQSRCSILSPELALPTGSRALTTRSHAALHILGCLDTLAA FT MQDLKMGVASTEEETQAVMKVYSKEDYSVVNRFESHGGGWGYSAHSVEAIRFSADTDIL FT LGGLGLFGGRGEYTAKIKLFELGPDGGDHETDGDLLAETDVLAYDCAAREKYAMMFDEP FT VLLQAGWWYVAWARVSGPSSDCGSHGQASITTDDGVVFQFKSSKKSNNGTDVNAGQIPQ FT LLYRLPTSDGSASKGKQQTSEPVHILKRSFARTVSVECFESLLSILHWSWTTLVLGVEE FT LRGLKGFQFTATLLDLERLRFVGTCCLRLLRVYTCEIYPVSATGKAVVEETSKLAECIG FT KTRTLLRKILSEGVDHCMVKLDNDPQGYLSQPLSLLEAVLQECHNTFTACFHSFYPTPA FT LQWACLCDLLNCLDQDIQEANFKTSSSRLLAAVMSALCHTSVKLTSIFPIAYDGEVLLR FT SIVKQVSTENDSTLVHRFPLLVAHMEKLSQSEENISGMTSFREVLEKMLVIVVLPVRNS FT LRRENELFSSHLVSNTCGLLASIVSELTASALGSEVDGLNSLHSVKASANRFTKTSQGR FT SWNTGNGSPDAICFSVDKPGIVVVGFSVYGGGGIHEYELEVLVDDSEHAGDSTHSHRWT FT SLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYGSRTANGDGGMTTVQCP FT DGVTFTFSTCSLSSNGTNQTRGQIPQILYYRSEFDGDLQSQLLSKANEEDKNCSRALSV FT VSTVVRASKDLLHRALAVDADDIPELLSSSSLFSMLLPLIIAYIGPVAAAIPKVAVEVF FT GLVQQLLPSVAILNQKYAPPAFNPNQSTDSTTGNQPEQGLSACTTSSHYAVIESEHPYK FT PACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVLRLLIPVRTVQNSGYGPKLTSVHEN FT LNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFS FT PGPDEGVIQLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAALQVCKTHSGI FT LGKGLALSHSPTILEALEGNLPLQIQSNEQSFLDDFIACVPGSSGGRLARWLQPDSYAD FT PQKTSLILNKDDIRCGWPTTITVQTKDQYGDVVHVPNMKVEVKAVPVSQKKMSLQQDQA FT KKPQRIPGSPAVTAASSNTDMTYGGLASPKLDVSYEPMIVKEARYIAITMMKVYENYSF FT EELRFASPTPKRPSENMLIRVNNDGTYCANWTPGAIGLYTLHVTIDGIEIDAGLEVKVK FT DPPKGMIPPGTQLVKPKSEPQPNKVRKFVAKDSAGLRIRSHPSLQSEQIGIVKVNGTIT FT FIDEIHNDDGVWLRLNDETIKKYVPNMNGYTEAWCLSFNQHLGKSLLVPVDESKTNTDD FT FFKDINSCCPQEATMQEQDMPFLRGGPGMYKVVKTGPSGHNIRSCPNLRGIPIGMLVLG FT NKVKAVGEVTNSEGTWVQLDQNSMVEFCESDEGEAWSLARDRGGNQYLRHEDEQALLDQ FT NSQTPPPSPFSVQAFNKGASCSAQGFDYGLGNSKGDRGNISTSSKPASTSGKSELSSKH FT SRSLKPDGRMSRTTADQKKPRGTESLSASESLILKSDAAKLRSDSHSRSLSPNHNTLQT FT LKSDGRMPSSSRAESPGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTA FT PVKTKLDPPRERSKSDSYTLDPDTLRKKKMPLTEPLRGRSTSPKPKSVPKDSTDSPGSE FT NRAPSPHVVQENLHSEVVEVCTSSTLKTNSLTDSTCDDSSEFKSVDEGSNKVHFSIGKA FT PLKDEQEMRASPKISRKCANRHTRPKKEKSSFLFKGDGSKPLEPAKQAMSPSVAECARA FT VFASFLWHEGIVHDAMACSSFLKFHPELSKEHAPIRSSLNSQQPTEEKETKLKNRHSLE FT ISSALNMFNIAPHGPDISKMGSINKNKVLSMLKEPPLHEKCEDGKTETTFEMSMHNTMK FT SKSPLPLTLQHLVAFWEDISLATIKAASQNMIFPSPGSCAVLKKKECEKENKKSKKEKK FT KKEKAEVRPRGNLFGEMAQLAVGGPEKDTICELCGESHPYPVTYHMRQAHPGCGRYAGG FT QGYNSIGHFCGGWAGNCGDGGIGGSTWYLVCDRCREKYLREKQAAAREKVKQSRRKPMQ FT VKTPRALPTMEAHQVIKANALFLLSLSSAAEPSILCYHPAKPFQSQLPSVKEGISEDLP FT VKMPCLYLQTLARHHHENFVGYQDDNLFQDEMRYLRSTSVPAPYISVTPDASPNVFEEP FT ESNMKSMPPSLETSPITDTDLAKRTVFQRSYSVVASEYDKQHSILPARVKAIPRRRVNS FT GDTEVGSSLLRHPSPELSRLISAHSSLSKGERNFQWPVLAFVIQHHDLEGLEIAMKQAL FT RKSACRVFAMEAFNWLLCNVIQTTSLHDILWHFVASLTPAPVEPEEEEDEENKTSKENS FT EQEKDTRVCEHPLSDIVIAGEAAHPLPHTFHRLLQTISDLMMSLPSGSSLQQMALRCWS FT LKFKQSDHQFLHQSNVFHHINNILSKSDDGDSEESFSISIQSGFEAMSQELCIVMCLKD FT LTSIVDIKTSSRPAMIGSLTDGSTETFWESGDEDKNKTKNITINCVKGINARYVSVHVD FT NSRDLGNKVTSMTFLTGKAVEDLCRIKQVDLDSRHIGWVTSELPGGDNHIIKIELKGPE FT NTLRVRQVKVLGWKDGESTKIAGQISASVAQQRNCEAETLRVFRLITSQVFGKLISGDA FT EPTPEQEEKALLSSPEGEEKVYNATSDADLKEHMVGIIFSRSKLTNLQKQVCAHIVQAI FT RMEATRVREEWEHAISSKENANSQPNDEDASSDAYCFELLSMVLALSGSNVGRQYLAQQ FT LTLLQDLFSLLHTASPRVQRQVTSLLRRVLPEVTPSRLASIIGVKSLPPADISDIIHST FT EKGDWNKLGILDMFLGCIAKALTVQLKAKGTTITGTAGTTVGKGVTTVTLPMIFNSSYL FT RRGESHWWMKGSTPTQISEIIIKLIKDMAAGHLSEAWSRVTKNAIAETIIALTKMEEEF FT RSPVRCIATTRLWLALASLCVLDQDHVDRLSSGRWMGKDGQQKQMPMCDNHDDGETAAI FT ILCNVCGNLCTDCDRFLHLHRRTKTHQRQVFKEEEEAIKVDLHEGCGRTKLFWLMALAD FT SKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVCSDADCQEYAKIACSKT FT HPCGHPCGGVKNEEHCLPCLHGCDKSATSLKQDADDMCMICFTEALSAAPAIQLDCSHI FT FHLQCCRRVLENRWLGPRITFGFISCPICKNKINHIVLKDLLDPIKELYEDVRRKALMR FT LEYEGLHKSEAITTPGVRFYNDPAGYAMNRYAYYVCYKCRKAYFGGEARCDAEAGRGDD FT YDPRELICGACSDVSRAQMCPKHGTDFLEYKCRYCCSVAVFFCFGTTHFCNACHDDFQR FT MTSIPKEELPHCPAGPKGKQLEGTECPLHVVHPPTGEEFALGCGVCRNAHTF" FT mRNA complement(join(AC001226.1:76066..76902, FT AC001226.1:82406..82571,AC001226.1:83220..83327, FT AC001226.1:86967..87176,AC001226.1:88395..88502, FT AC001226.1:89627..89815,AC001226.1:90932..91035, FT AC001226.1:92578..92710,AC001226.1:93071..93199, FT AC001226.1:94005..94106,AC001226.1:96024..96143, FT AC001226.1:97401..97497,AC001226.1:98990..99273, FT AC001226.1:99974..100240,AC001226.1:102040..102120, FT 77650886..77650984,77651283..77651522,77652959..77653024, FT 77655562..77655786,77655972..77656128,77657167..77657327, FT 77661619..77661768,77662967..77663166,77664241..77664398, FT 77667300..77667467,77669493..77669737,77670447..77670616, FT 77671505..77673148,77695508..77695630,77699471..77699603, FT 77700453..77700677,77713331..77713471,77714182..77714298, FT 77714981..77715078,77718580..77718695,77720297..77720352, FT AL159154.16:2461..2676,AL159154.16:7785..7929, FT AL159154.16:9664..9836,AL159154.16:13633..13682, FT AL159154.16:16181..16268,AL159154.16:17000..17118, FT AL159154.16:18056..18281,AL159154.16:20155..20373, FT AL159154.16:21341..21441,AL159154.16:23219..23361, FT AL159154.16:26038..26216,AL159154.16:28224..28355, FT AL159154.16:29475..29681,AL159154.16:31854..32045, FT AL159154.16:33428..33649,AL159154.16:36830..37104, FT AL159154.16:37598..37790,AL159154.16:40678..40774, FT AL159154.16:41979..42062,AL159154.16:43406..43540, FT AL159154.16:45880..45971,AL159154.16:56983..57110, FT AL159154.16:57200..57325,AL159154.16:58380..58552, FT AL159154.16:62894..63047,AL159154.16:63683..63887, FT AL159154.16:69567..69684,AL159154.16:76178..76259, FT AL159154.16:77162..77281,AL159154.16:84883..84990, FT AL159154.16:94786..94887,AL159154.16:95533..95678, FT AL159154.16:102878..103082,AL159154.16:109398..109556, FT AL159154.16:112155..112319,AL159154.16:112898..113102, FT AL159154.16:113780..113856,AL159154.16:115378..115516, FT AL159154.16:115656..115729,AL159154.16:119568..119664, FT AL159154.16:121719..121790,AL159154.16:122023..122265, FT AL159158.12:335..531,AL159158.12:5621..5774, FT AL159158.12:15024..15239,AL159158.12:23462..23537, FT AL159158.12:53337..53542,AL159158.12:53833..53905)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AB020723.1 Em:AF075587.1 FT Em:AF083244.1 Em:AK023888.1 Em:AK025299.1 Em:BC022619.1 FT Em:BC034100.1 Em:BC037971.1" FT /note="match: ESTs: Em:AA176067.1 Em:AA194512.1 FT Em:AA236471.1 Em:AA287538 Em:AA287538.1 Em:AA312827.1 FT Em:AA348130.1 Em:AA396070.1 Em:AA488899.1 Em:AA488967.1 FT Em:AA545634.1 Em:AA547620.1 Em:AA578559.1 Em:AA734728.1 FT Em:AA794392.1 Em:AI205089.1 Em:AI380181.1 Em:AI427221.1 FT Em:AI761205.1 Em:AL041775.1 Em:AL042591.1 Em:AL046362.1 FT Em:AL046363.1 Em:AL046735.1 Em:AL134630.1 Em:AL701151.1 FT Em:AL704331.1 Em:AL704422.1 Em:AL706888.1 Em:AL865784.1 FT Em:AU016979.1 Em:AU036081.1 Em:AU141436.1 Em:AU144641.1 FT Em:AU158999.1 Em:AU240395.1 Em:AW060295.1 Em:AW068653.1 FT Em:AW068654.1 Em:AW086424.1 Em:AW106226.1 Em:AW107953.1 FT Em:AW165993.1 Em:AW391684.1 Em:AW418339.1 Em:AW426995.1 FT Em:AW440465.1 Em:AW441131.1 Em:AW485738.1 Em:AW491600.1 FT Em:AW503973.1 Em:AW505373.1 Em:AW609667.1 Em:AW609682.1 FT Em:AW866511.1 Em:AW866590.1 Em:AW892805.1 Em:AW935046.1 FT Em:AW954594.1 Em:AW964053.1 Em:AW964505.1 Em:AW968937.1 FT Em:BB059590.2 Em:BB424418.1 Em:BE007025.1 Em:BE007848.1 FT Em:BE081150.1 Em:BE112881.1 Em:BE119322.1 Em:BE150458.1 FT Em:BE368973.1 Em:BE535941.1 Em:BE538774.1 Em:BE614958.1 FT Em:BE649603.1 Em:BE686263.1 Em:BE815141.1 Em:BE815143.1 FT Em:BE815176.1 Em:BE815384.1 Em:BE825496.1 Em:BE825521.1 FT Em:BE825548.1 Em:BE833940.1 Em:BE841205.1 Em:BE878486.1 FT Em:BE886946.1 Em:BE925820.1 Em:BE940722.1 Em:BE951767.1 FT Em:BF080906.1 Em:BF082488.1 Em:BF083274.1 Em:BF142945.1 FT Em:BF242034.1 Em:BF304027.1 Em:BF344699.1 Em:BF373985.1 FT Em:BF469588.1 Em:BF514836.1 Em:BF537239.1 Em:BF574171.1 FT Em:BF575098.1 Em:BF606964.1 Em:BF662898.1 Em:BF670799.1 FT Em:BF879639.1 Em:BF948651.1 Em:BF950020.1 Em:BF956048.1 FT Em:BF975890.1 Em:BF990098.1 Em:BG070742.1 Em:BG083658.1 FT Em:BG091563.1 Em:BG108656.1 Em:BG246721.1 Em:BG292778.1 FT Em:BG294071.1 Em:BG399615.1 Em:BG431735.1 Em:BG468581.1 FT Em:BG611405.1 Em:BG685124.1 Em:BG686737.1 Em:BG740625.1 FT Em:BG759429.1 Em:BG871812.1 Em:BG901059.1 Em:BG911017.1 FT Em:BG915741.1 Em:BG973536.1 Em:BI027800.1 Em:BI039901.1 FT Em:BI040842.1 Em:BI041280.1 Em:BI101896.1 Em:BI113217.1 FT Em:BI401114.1 Em:BI655508.1 Em:BI662628.1 Em:BI790327.1 FT Em:BI828665.1 Em:BI859607.1 Em:BI859936.1 Em:BI908491.1 FT Em:BJ004870.1 Em:BJ042867.1 Em:BM045347.1 Em:BM051979.1 FT Em:BM145645.1 Em:BM146792.1 Em:BM174892.1 Em:BM226215.1 FT Em:BM237430.1 Em:BM238561.1 Em:BM240076.1 Em:BM245124.1 FT Em:BM414719.1 Em:BM414741.1 Em:BM414773.1 Em:BM414792.1 FT Em:BM423221.1 Em:BM423302.1 Em:BM432104.1 Em:BM446128.1 FT Em:BM455738.1 Em:BM464209.1 Em:BM468370.1 Em:BM479042.1 FT Em:BM662246.1 Em:BM691604.1 Em:BM788156.1 Em:BM910075.1 FT Em:BM910563.1 Em:BM911214.1 Em:BM926142.1 Em:BQ008442.1 FT Em:BQ019702.1 Em:BQ025527.1 Em:BQ049194.1 Em:BQ063902.1 FT Em:BQ066905.1 Em:BQ175897.1 Em:BQ201485.1 Em:BQ229176.1 FT Em:BQ339357.1 Em:BQ443689.1 Em:BQ553553.1 Em:BQ571465.1 FT Em:BQ601322.1 Em:BQ721146.1 Em:BQ721568.1 Em:BU146129.1 FT Em:BU147423.1 Em:BU567893.1 Em:BU618933.1 Em:BU633966.1 FT Em:BU683499.1 Em:CA316790.1 Em:CA323280.1 Em:CA391747.1 FT Em:D80469.1 Em:D80472.1 Em:H22773.1 Em:H64629.1 Em:H65959.1 FT Em:N52657.1 Em:W44173.1 Em:W76419.1 Em:Z21226.1" FT mRNA complement(join(77672936..77673146,77677342..77677443, FT 77692473..77692591)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-007" FT /product="novel protein" FT /note="match: ESTs: Em:W26944.1" FT misc_feature 77697726 FT /note="Clone_left_end: RP11-428G23" FT mRNA complement(join(77695359..77695628,77699469..77699561)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-006" FT /product="novel protein" FT /note="match: ESTs: Em:AA610712.1" FT mRNA complement(join(77672203..77673148,77692475..77692654, FT 77695508..77695630,77699471..77699603,77700453..77700651)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-003" FT /product="novel protein" FT /note="match: cDNAs: Em:AK000968.1" FT /note="match: ESTs: Em:AA234580.1 Em:AU117955.1 FT Em:BE967542.1" FT mRNA complement(join(77695506..77695628,77699469..77699601, FT 77700451..77700675,77703289..77703363,77713329..77713469, FT 77714180..77714296,77714979..77715076)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-005" FT /product="novel protein" FT /note="match: ESTs: Em:BE655214.1 Em:BG391609.1 FT Em:W38876.1" FT mRNA join(AC001226.1:106923..106988,77649715..77649717, FT 77650949..77651066,77657143..77657245,77661685..77661911) FT /locus_tag="RP11-226E21.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BG208820.1" FT mRNA join(AC001226.1:106923..106988,77649715..77649717, FT 77650949..77650999,77661685..77661911) FT /locus_tag="RP11-226E21.3-003" FT /product="novel transcript" FT /note="match: ESTs: Em:BG198294.1" FT mRNA join(AC001226.1:106927..106988,77649715..77649717, FT 77650949..77651066,77661685..77661832) FT /locus_tag="RP11-226E21.3-002" FT /product="novel transcript" FT /note="match: ESTs: Em:BG189094.1 Em:BG213973.1" FT misc_feature 77722509..77847372 FT /note="annotated region of clone" FT mRNA complement(join(77844166..77844198,77844431..77844673, FT 77846458..77846535,AL159158.12:335..374)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-009" FT /product="novel protein" FT /note="match: ESTs: Em:AA287873.1" FT mRNA complement(join(AL359257.9:93223..93662, FT AL359257.9:95264..95319,77724869..77724913)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-004" FT /product="novel protein" FT /note="match: ESTs: Em:BF361171.1" FT misc_feature 77768784 FT /note="Clone_right_end: RP11-226E21" FT CDS complement(join(AC001226.1:76787..76902, FT AC001226.1:82406..82571,AC001226.1:83220..83327, FT AC001226.1:86967..87176,AC001226.1:88395..88502, FT AC001226.1:89627..89815,AC001226.1:90932..91035, FT AC001226.1:92578..92710,AC001226.1:93071..93199, FT AC001226.1:94005..94106,AC001226.1:96024..96143, FT AC001226.1:97401..97497,AC001226.1:98990..99273, FT AC001226.1:99974..100240,AC001226.1:102040..102120, FT AL359257.9:25855..25953,AL359257.9:26252..26491, FT AL359257.9:27928..27993,AL359257.9:30531..30755, FT AL359257.9:30941..31097,AL359257.9:32136..32296, FT AL359257.9:36588..36737,AL359257.9:37936..38135, FT AL359257.9:39210..39367,AL359257.9:42269..42436, FT AL359257.9:44462..44706,AL359257.9:45416..45585, FT AL359257.9:46474..48117,AL359257.9:70477..70599, FT AL359257.9:74440..74572,AL359257.9:75422..75646, FT AL359257.9:88300..88440,AL359257.9:89151..89267, FT AL359257.9:89950..90047,AL359257.9:93549..93664, FT AL359257.9:95266..95321,77724869..77725084, FT 77730193..77730337,77732072..77732244,77736041..77736090, FT 77738589..77738676,77739408..77739526,77740464..77740689, FT 77742563..77742781,77743749..77743849,77745627..77745769, FT 77748446..77748624,77750632..77750763,77751883..77752089, FT 77754262..77754453,77755836..77756057,77759238..77759512, FT 77760006..77760198,77763086..77763182,77764387..77764470, FT 77765814..77765948,77768288..77768379,77779391..77779518, FT 77779608..77779733,77780788..77780960,77785302..77785455, FT 77786091..77786295,77791975..77792092,77798586..77798667, FT 77799570..77799689,77807291..77807398,77817194..77817295, FT 77817941..77818086,77825286..77825490,77831806..77831964, FT 77834563..77834727,77835306..77835510,77836188..77836264, FT 77837786..77837924,77838064..77838137,77841976..77842072, FT 77844127..77844198,77844431..77844673,AL159158.12:335..531, FT AL159158.12:5621..5774,AL159158.12:15024..15239, FT AL159158.12:23462..23537,AL159158.12:53337..53524)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-001" FT /standard_name="OTTHUMP00000018523" FT /product="novel protein" FT /note="match: proteins: Sw:O75592 Sw:O75592" FT /protein_id="CAH73736.1" FT /translation="MPVPDGSVAAAGLGLGLPAADSRGHYQLLLSGRALADRYRRIYTA FT ALNDRDQGGGSAGHPASRNKKILNKKKLKRKQKSKSKVKTRSKSENLENTVIIPDIKLH FT SNPSAFNIYCNVRHCVLEWQKKEISLAAASKNSVQSGESDSDEEEESKEPPIKLPKIIE FT VGLCEVFELIKETRFSHPSLCLRSLQALLNVLQGQQPEGLQSEPPEVLESLFQLLLEIT FT VRSTGMNDSTGQSLTALSCACLFSLVASWGETGRTLQAISAILTNNGSHACQTIQVPTI FT LNSLQRSVQAVLVGKIQIQDWFSNGIKKAALMHKWPLKEISVDEDDQCLLQNDGFFLYL FT LCKDGLYKIGSGYSGTVRGHIYNSTSRIRNRKEKKSWLGYAQGYLLYRDVNNHSMTAIR FT ISPETLEQDGTVMLPDCHTEGQNILFTDGEYINQIAASRDDGFVVRIFATSTEPVLQQE FT LQLKLARKCLHACGISLFDLEKDLHIISTGFDEESAILGAGREFALMKTANGKIYYTGK FT YQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGED FT GESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSS FT LVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENM FT ATAMDEDLEEELDEKDEKSMMCPPGMHKWKLEQCMVCTVCGDCTGYGASCVSSGRPDRV FT PGGICGCGSGESGCAVCGCCKACARELDGQEARQRGILDAVKEMIPLDLLLAVPVPGVN FT IEEHLQLRQEEKRQRVIRRHRLEEGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRD FT KHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQ FT HGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGRPI FT LDVPYWNAKPAPMPNIGSKYGRKATWIGASGDQTFLRIDEALINSHVLATSEIFASKHI FT IGLVPASISEPPPFKCLLINKVDGSCKTFNDSEQEDLQGFGVCLDPVYDVIWRFRPNTR FT ELWCYNAVVADARLPSAADMQSRCSILSPELALPTGSRALTTRSHAALHILGCLDTLAA FT MQDLKMGVASTEEETQAVMKVYSKEDYSVVNRFESHGGGWGYSAHSVEAIRFSADTDIL FT LGGLGLFGGRGEYTAKIKLFELGPDGGDHETDGDLLAETDVLAYDCAAREKYAMMFDEP FT VLLQAGWWYVAWARVSGPSSDCGSHGQASITTDDGVVFQFKSSKKSNNGTDVNAGQIPQ FT LLYRLPTSDGSASKGKQQTSEPVHILKRSFARTVSVECFESLLSILHWSWTTLVLGVEE FT LRGLKGFQFTATLLDLERLRFVGTCCLRLLRVYTCEIYPVSATGKAVVEETSKLAECIG FT KTRTLLRKILSEGVDHCMVKLDNDPQGYLSQPLSLLEAVLQECHNTFTACFHSFYPTPA FT LQWACLCDLLNCLDQDIQEANFKTSSSRLLAAVMSALCHTSVKLTSIFPIAYDGEVLLR FT SIVKQVSTENDSTLVHRFPLLVAHMEKLSQSEENISGMTSFREVLEKMLVIVVLPVRNS FT LRRENELFSSHLVSNTCGLLASIVSELTASALGSEVDGLNSLHSVKASANRFTKTSQGR FT SWNTGNGSPDAICFSVDKPGIVVVGFSVYGGGGIHEYELEVLVDDSEHAGDSTHSHRWT FT SLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYGSRTANGDGGMTTVQCP FT DGVTFTFSTCSLSSNGTNQTRGQIPQILYYRSEFDGDLQSQLLSKANEEDKNCSRALSV FT VSTVVRASKDLLHRALAVDADDIPELLSSSSLFSMLLPLIIAYIGPVAAAIPKVAVEVF FT GLVQQLLPSVAILNQKYAPPAFNPNQSTDSTTGNQPEQGLSACTTSSHYAVIESEHPYK FT PACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVLRLLIPVRTVQNSGYGPKLTSVHEN FT LNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFS FT PGPDEGVIQLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAALQVCKTHSGI FT LGKGLALSHSPTILEALEGNLPLQIQSNEQSFLDDFIACVPGSSGGRLARWLQPDSYAD FT PQKTSLILNKDDIRCGWPTTITVQTKDQYGDVVHVPNMKVEVKAVPVSQKKMSLQQDQA FT KKPQRIPGSPAVTAASSNTDMTYGGLASPKLDVSYEPMIVKEARYIAITMMKVYENYSF FT EELRFASPTPKRPSENMLIRVNNDGTYCANWTPGAIGLYTLHVTIDGIEIDAGLEVKVK FT DPPKGMIPPGTQLVKPKSEPQPNKVRKFVAKDSAGLRIRSHPSLQSEQIGIVKVNGTIT FT FIDEIHNDDGVWLRLNDETIKKYVPNMNGYTEAWCLSFNQHLGKSLLVPVDESKTNTDD FT FFKDINSCCPQEATMQEQDMPFLRGGPGMYKVVKTGPSGHNIRSCPNLRGIPIGMLVLG FT NKVKAVGEVTNSEGTWVQLDQNSMVEFCESDEGEAWSLARDRGGNQYLRHEDEQALLDQ FT NSQTPPPSPFSVQAFNKGASCSAQGFDYGLGNSKGDRGNISTSSKPASTSGKSELSSKH FT SRSLKPDGRMSRTTADQKKPRGTESLSASESLILKSDAAKLRSDSHSRSLSPNHNTLQT FT LKSDGRMPSSSRAESPGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTA FT PVKTKLDPPRERSKSDSYTLDPDTLRKKKMPLTEPLRGRSTSPKPKSVPKDSTDSPGSE FT NRAPSPHVVQENLHSEVVEVCTSSTLKTNSLTDSTCDDSSEFKSVDEGSNKVHFSIGKA FT PLKDEQEMRASPKISRKCANRHTRPKKEKSSFLFKGDGSKPLEPAKQAMSPSVAECARA FT VFASFLWHEGIVHDAMACSSFLKFHPELSKEHAPIRSSLNSQQPTEEKETKLKNRHSLE FT ISSALNMFNIAPHGPDISKMGSINKNKVLSMLKEPPLHEKCEDGKTETTFEMSMHNTMK FT SKSPLPLTLQHLVAFWEDISLATIKAASQNMIFPSPGSCAVLKKKECEKENKKSKKEKK FT KKEKAEVRPRGNLFGEMAQLAVGGPEKDTICELCGESHPYPVTYHMRQAHPGCGRYAGG FT QGYNSIGHFCGGWAGNCGDGGIGGSTWYLVCDRCREKYLREKQAAAREKVKQSRRKPMQ FT VKTPRALPTMEAHQVIKANALFLLSLSSAAEPSILCYHPAKPFQSQLPSVKEGISEDLP FT VKMPCLYLQTLARHHHENFVGYQDDNLFQDEMRYLRSTSVPAPYISVTPDASPNVFEEP FT ESNMKSMPPSLETSPITDTDLAKRTVFQRSYSVVASEYDKQHSILPARVKAIPRRRVNS FT GDTEVGSSLLRHPSPELSRLISAHSSLSKGERNFQWPVLAFVIQHHDLEGLEIAMKQAL FT RKSACRVFAMEAFNWLLCNVIQTTSLHDILWHFVASLTPAPVEPEEEEDEENKTSKENS FT EQEKDTRVCEHPLSDIVIAGEAAHPLPHTFHRLLQTISDLMMSLPSGSSLQQMALRCWS FT LKFKQSDHQFLHQSNVFHHINNILSKSDDGDSEESFSISIQSGFEAMSQELCIVMCLKD FT LTSIVDIKTSSRPAMIGSLTDGSTETFWESGDEDKNKTKNITINCVKGINARYVSVHVD FT NSRDLGNKVTSMTFLTGKAVEDLCRIKQVDLDSRHIGWVTSELPGGDNHIIKIELKGPE FT NTLRVRQVKVLGWKDGESTKIAGQISASVAQQRNCEAETLRVFRLITSQVFGKLISGDA FT EPTPEQEEKALLSSPEGEEKVYNATSDADLKEHMVGIIFSRSKLTNLQKQVCAHIVQAI FT RMEATRVREEWEHAISSKENANSQPNDEDASSDAYCFELLSMVLALSGSNVGRQYLAQQ FT LTLLQDLFSLLHTASPRVQRQVTSLLRRVLPEVTPSRLASIIGVKSLPPADISDIIHST FT EKGDWNKLGILDMFLGCIAKALTVQLKAKGTTITGTAGTTVGKGVTTVTLPMIFNSSYL FT RRGESHWWMKGSTPTQISEIIIKLIKDMAAGHLSEAWSRVTKNAIAETIIALTKMEEEF FT RSPVRCIATTRLWLALASLCVLDQDHVDRLSSGRWMGKDGQQKQMPMCDNHDDGETAAI FT ILCNVCGNLCTDCDRFLHLHRRTKTHQRQVFKEEEEAIKVDLHEGCGRTKLFWLMALAD FT SKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVCSDADCQEYAKIACSKT FT HPCGHPCGGVKNEEHCLPCLHGCDKSATSLKQDADDMCMICFTEALSAAPAIQLDCSHI FT FHLQCCRRVLENRWLGPRITFGFISCPICKNKINHIVLKDLLDPIKELYEDVRRKALMR FT LEYEGLHKSEAITTPGVRFYNDPAGYAMNRYAYYVCYKCRKAYFGGEARCDAEAGRGDD FT YDPRELICGACSDVSRAQMCPKHGTDFLEYKCRYCCSVAVFFCFGTTHFCNACHDDFQR FT MTSIPKEELPHCPAGPKGKQLEGTECPLHVVHPPTGEEFALGCGVCRNAHTF" FT mRNA complement(join(AC001226.1:76066..76902, FT AC001226.1:82406..82571,AC001226.1:83220..83327, FT AC001226.1:86967..87176,AC001226.1:88395..88502, FT AC001226.1:89627..89815,AC001226.1:90932..91035, FT AC001226.1:92578..92710,AC001226.1:93071..93199, FT AC001226.1:94005..94106,AC001226.1:96024..96143, FT AC001226.1:97401..97497,AC001226.1:98990..99273, FT AC001226.1:99974..100240,AC001226.1:102040..102120, FT AL359257.9:25855..25953,AL359257.9:26252..26491, FT AL359257.9:27928..27993,AL359257.9:30531..30755, FT AL359257.9:30941..31097,AL359257.9:32136..32296, FT AL359257.9:36588..36737,AL359257.9:37936..38135, FT AL359257.9:39210..39367,AL359257.9:42269..42436, FT AL359257.9:44462..44706,AL359257.9:45416..45585, FT AL359257.9:46474..48117,AL359257.9:70477..70599, FT AL359257.9:74440..74572,AL359257.9:75422..75646, FT AL359257.9:88300..88440,AL359257.9:89151..89267, FT AL359257.9:89950..90047,AL359257.9:93549..93664, FT AL359257.9:95266..95321,77724869..77725084, FT 77730193..77730337,77732072..77732244,77736041..77736090, FT 77738589..77738676,77739408..77739526,77740464..77740689, FT 77742563..77742781,77743749..77743849,77745627..77745769, FT 77748446..77748624,77750632..77750763,77751883..77752089, FT 77754262..77754453,77755836..77756057,77759238..77759512, FT 77760006..77760198,77763086..77763182,77764387..77764470, FT 77765814..77765948,77768288..77768379,77779391..77779518, FT 77779608..77779733,77780788..77780960,77785302..77785455, FT 77786091..77786295,77791975..77792092,77798586..77798667, FT 77799570..77799689,77807291..77807398,77817194..77817295, FT 77817941..77818086,77825286..77825490,77831806..77831964, FT 77834563..77834727,77835306..77835510,77836188..77836264, FT 77837786..77837924,77838064..77838137,77841976..77842072, FT 77844127..77844198,77844431..77844673,AL159158.12:335..531, FT AL159158.12:5621..5774,AL159158.12:15024..15239, FT AL159158.12:23462..23537,AL159158.12:53337..53542, FT AL159158.12:53833..53905)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AB020723.1 Em:AF075587.1 FT Em:AF083244.1 Em:AK023888.1 Em:AK025299.1 Em:BC022619.1 FT Em:BC034100.1 Em:BC037971.1" FT /note="match: ESTs: Em:AA176067.1 Em:AA194512.1 FT Em:AA236471.1 Em:AA287538 Em:AA287538.1 Em:AA312827.1 FT Em:AA348130.1 Em:AA396070.1 Em:AA488899.1 Em:AA488967.1 FT Em:AA545634.1 Em:AA547620.1 Em:AA578559.1 Em:AA734728.1 FT Em:AA794392.1 Em:AI205089.1 Em:AI380181.1 Em:AI427221.1 FT Em:AI761205.1 Em:AL041775.1 Em:AL042591.1 Em:AL046362.1 FT Em:AL046363.1 Em:AL046735.1 Em:AL134630.1 Em:AL701151.1 FT Em:AL704331.1 Em:AL704422.1 Em:AL706888.1 Em:AL865784.1 FT Em:AU016979.1 Em:AU036081.1 Em:AU141436.1 Em:AU144641.1 FT Em:AU158999.1 Em:AU240395.1 Em:AW060295.1 Em:AW068653.1 FT Em:AW068654.1 Em:AW086424.1 Em:AW106226.1 Em:AW107953.1 FT Em:AW165993.1 Em:AW391684.1 Em:AW418339.1 Em:AW426995.1 FT Em:AW440465.1 Em:AW441131.1 Em:AW485738.1 Em:AW491600.1 FT Em:AW503973.1 Em:AW505373.1 Em:AW609667.1 Em:AW609682.1 FT Em:AW866511.1 Em:AW866590.1 Em:AW892805.1 Em:AW935046.1 FT Em:AW954594.1 Em:AW964053.1 Em:AW964505.1 Em:AW968937.1 FT Em:BB059590.2 Em:BB424418.1 Em:BE007025.1 Em:BE007848.1 FT Em:BE081150.1 Em:BE112881.1 Em:BE119322.1 Em:BE150458.1 FT Em:BE368973.1 Em:BE535941.1 Em:BE538774.1 Em:BE614958.1 FT Em:BE649603.1 Em:BE686263.1 Em:BE815141.1 Em:BE815143.1 FT Em:BE815176.1 Em:BE815384.1 Em:BE825496.1 Em:BE825521.1 FT Em:BE825548.1 Em:BE833940.1 Em:BE841205.1 Em:BE878486.1 FT Em:BE886946.1 Em:BE925820.1 Em:BE940722.1 Em:BE951767.1 FT Em:BF080906.1 Em:BF082488.1 Em:BF083274.1 Em:BF142945.1 FT Em:BF242034.1 Em:BF304027.1 Em:BF344699.1 Em:BF373985.1 FT Em:BF469588.1 Em:BF514836.1 Em:BF537239.1 Em:BF574171.1 FT Em:BF575098.1 Em:BF606964.1 Em:BF662898.1 Em:BF670799.1 FT Em:BF879639.1 Em:BF948651.1 Em:BF950020.1 Em:BF956048.1 FT Em:BF975890.1 Em:BF990098.1 Em:BG070742.1 Em:BG083658.1 FT Em:BG091563.1 Em:BG108656.1 Em:BG246721.1 Em:BG292778.1 FT Em:BG294071.1 Em:BG399615.1 Em:BG431735.1 Em:BG468581.1 FT Em:BG611405.1 Em:BG685124.1 Em:BG686737.1 Em:BG740625.1 FT Em:BG759429.1 Em:BG871812.1 Em:BG901059.1 Em:BG911017.1 FT Em:BG915741.1 Em:BG973536.1 Em:BI027800.1 Em:BI039901.1 FT Em:BI040842.1 Em:BI041280.1 Em:BI101896.1 Em:BI113217.1 FT Em:BI401114.1 Em:BI655508.1 Em:BI662628.1 Em:BI790327.1 FT Em:BI828665.1 Em:BI859607.1 Em:BI859936.1 Em:BI908491.1 FT Em:BJ004870.1 Em:BJ042867.1 Em:BM045347.1 Em:BM051979.1 FT Em:BM145645.1 Em:BM146792.1 Em:BM174892.1 Em:BM226215.1 FT Em:BM237430.1 Em:BM238561.1 Em:BM240076.1 Em:BM245124.1 FT Em:BM414719.1 Em:BM414741.1 Em:BM414773.1 Em:BM414792.1 FT Em:BM423221.1 Em:BM423302.1 Em:BM432104.1 Em:BM446128.1 FT Em:BM455738.1 Em:BM464209.1 Em:BM468370.1 Em:BM479042.1 FT Em:BM662246.1 Em:BM691604.1 Em:BM788156.1 Em:BM910075.1 FT Em:BM910563.1 Em:BM911214.1 Em:BM926142.1 Em:BQ008442.1 FT Em:BQ019702.1 Em:BQ025527.1 Em:BQ049194.1 Em:BQ063902.1 FT Em:BQ066905.1 Em:BQ175897.1 Em:BQ201485.1 Em:BQ229176.1 FT Em:BQ339357.1 Em:BQ443689.1 Em:BQ553553.1 Em:BQ571465.1 FT Em:BQ601322.1 Em:BQ721146.1 Em:BQ721568.1 Em:BU146129.1 FT Em:BU147423.1 Em:BU567893.1 Em:BU618933.1 Em:BU633966.1 FT Em:BU683499.1 Em:CA316790.1 Em:CA323280.1 Em:CA391747.1 FT Em:D80469.1 Em:D80472.1 Em:H22773.1 Em:H64629.1 Em:H65959.1 FT Em:N52657.1 Em:W44173.1 Em:W76419.1 Em:Z21226.1" FT misc_feature 77847173 FT /note="Clone_left_end: RP11-81G4" FT misc_feature 77847373..78001954 FT /note="annotated region of clone" FT mRNA complement(join(AL159154.16:121758..121790, FT AL159154.16:122023..122265,AL159154.16:124050..124127, FT 77847607..77847646)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-009" FT /product="novel protein" FT /note="match: ESTs: Em:AA287873.1" FT misc_feature 77895673 FT /note="Clone_right_end: RP11-428G23" FT mRNA complement(join(77870738..77870809,77900609..77901185)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-010" FT /product="novel protein" FT /note="match: ESTs: Em:BB649201.1" FT CDS complement(join(AC001226.1:76787..76902, FT AC001226.1:82406..82571,AC001226.1:83220..83327, FT AC001226.1:86967..87176,AC001226.1:88395..88502, FT AC001226.1:89627..89815,AC001226.1:90932..91035, FT AC001226.1:92578..92710,AC001226.1:93071..93199, FT AC001226.1:94005..94106,AC001226.1:96024..96143, FT AC001226.1:97401..97497,AC001226.1:98990..99273, FT AC001226.1:99974..100240,AC001226.1:102040..102120, FT AL359257.9:25855..25953,AL359257.9:26252..26491, FT AL359257.9:27928..27993,AL359257.9:30531..30755, FT AL359257.9:30941..31097,AL359257.9:32136..32296, FT AL359257.9:36588..36737,AL359257.9:37936..38135, FT AL359257.9:39210..39367,AL359257.9:42269..42436, FT AL359257.9:44462..44706,AL359257.9:45416..45585, FT AL359257.9:46474..48117,AL359257.9:70477..70599, FT AL359257.9:74440..74572,AL359257.9:75422..75646, FT AL359257.9:88300..88440,AL359257.9:89151..89267, FT AL359257.9:89950..90047,AL359257.9:93549..93664, FT AL359257.9:95266..95321,AL159154.16:2461..2676, FT AL159154.16:7785..7929,AL159154.16:9664..9836, FT AL159154.16:13633..13682,AL159154.16:16181..16268, FT AL159154.16:17000..17118,AL159154.16:18056..18281, FT AL159154.16:20155..20373,AL159154.16:21341..21441, FT AL159154.16:23219..23361,AL159154.16:26038..26216, FT AL159154.16:28224..28355,AL159154.16:29475..29681, FT AL159154.16:31854..32045,AL159154.16:33428..33649, FT AL159154.16:36830..37104,AL159154.16:37598..37790, FT AL159154.16:40678..40774,AL159154.16:41979..42062, FT AL159154.16:43406..43540,AL159154.16:45880..45971, FT AL159154.16:56983..57110,AL159154.16:57200..57325, FT AL159154.16:58380..58552,AL159154.16:62894..63047, FT AL159154.16:63683..63887,AL159154.16:69567..69684, FT AL159154.16:76178..76259,AL159154.16:77162..77281, FT AL159154.16:84883..84990,AL159154.16:94786..94887, FT AL159154.16:95533..95678,AL159154.16:102878..103082, FT AL159154.16:109398..109556,AL159154.16:112155..112319, FT AL159154.16:112898..113102,AL159154.16:113780..113856, FT AL159154.16:115378..115516,AL159154.16:115656..115729, FT AL159154.16:119568..119664,AL159154.16:121719..121790, FT AL159154.16:122023..122265,77847607..77847803, FT 77852893..77853046,77862296..77862511,77870734..77870809, FT 77900609..77900796)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-001" FT /standard_name="OTTHUMP00000018523" FT /product="novel protein" FT /note="match: proteins: Sw:O75592 Sw:O75592" FT /protein_id="CAI16842.1" FT /translation="MPVPDGSVAAAGLGLGLPAADSRGHYQLLLSGRALADRYRRIYTA FT ALNDRDQGGGSAGHPASRNKKILNKKKLKRKQKSKSKVKTRSKSENLENTVIIPDIKLH FT SNPSAFNIYCNVRHCVLEWQKKEISLAAASKNSVQSGESDSDEEEESKEPPIKLPKIIE FT VGLCEVFELIKETRFSHPSLCLRSLQALLNVLQGQQPEGLQSEPPEVLESLFQLLLEIT FT VRSTGMNDSTGQSLTALSCACLFSLVASWGETGRTLQAISAILTNNGSHACQTIQVPTI FT LNSLQRSVQAVLVGKIQIQDWFSNGIKKAALMHKWPLKEISVDEDDQCLLQNDGFFLYL FT LCKDGLYKIGSGYSGTVRGHIYNSTSRIRNRKEKKSWLGYAQGYLLYRDVNNHSMTAIR FT ISPETLEQDGTVMLPDCHTEGQNILFTDGEYINQIAASRDDGFVVRIFATSTEPVLQQE FT LQLKLARKCLHACGISLFDLEKDLHIISTGFDEESAILGAGREFALMKTANGKIYYTGK FT YQSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGED FT GESTKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAIYSDSSS FT LVTDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGAMNQGGKGFGVENM FT ATAMDEDLEEELDEKDEKSMMCPPGMHKWKLEQCMVCTVCGDCTGYGASCVSSGRPDRV FT PGGICGCGSGESGCAVCGCCKACARELDGQEARQRGILDAVKEMIPLDLLLAVPVPGVN FT IEEHLQLRQEEKRQRVIRRHRLEEGRGPLVFAGPIFMNHREQALARLRSHPAQLKHKRD FT KHKDGSGERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQ FT HGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTAVLLMDGQVFTFGSFSKGQLGRPI FT LDVPYWNAKPAPMPNIGSKYGRKATWIGASGDQTFLRIDEALINSHVLATSEIFASKHI FT IGLVPASISEPPPFKCLLINKVDGSCKTFNDSEQEDLQGFGVCLDPVYDVIWRFRPNTR FT ELWCYNAVVADARLPSAADMQSRCSILSPELALPTGSRALTTRSHAALHILGCLDTLAA FT MQDLKMGVASTEEETQAVMKVYSKEDYSVVNRFESHGGGWGYSAHSVEAIRFSADTDIL FT LGGLGLFGGRGEYTAKIKLFELGPDGGDHETDGDLLAETDVLAYDCAAREKYAMMFDEP FT VLLQAGWWYVAWARVSGPSSDCGSHGQASITTDDGVVFQFKSSKKSNNGTDVNAGQIPQ FT LLYRLPTSDGSASKGKQQTSEPVHILKRSFARTVSVECFESLLSILHWSWTTLVLGVEE FT LRGLKGFQFTATLLDLERLRFVGTCCLRLLRVYTCEIYPVSATGKAVVEETSKLAECIG FT KTRTLLRKILSEGVDHCMVKLDNDPQGYLSQPLSLLEAVLQECHNTFTACFHSFYPTPA FT LQWACLCDLLNCLDQDIQEANFKTSSSRLLAAVMSALCHTSVKLTSIFPIAYDGEVLLR FT SIVKQVSTENDSTLVHRFPLLVAHMEKLSQSEENISGMTSFREVLEKMLVIVVLPVRNS FT LRRENELFSSHLVSNTCGLLASIVSELTASALGSEVDGLNSLHSVKASANRFTKTSQGR FT SWNTGNGSPDAICFSVDKPGIVVVGFSVYGGGGIHEYELEVLVDDSEHAGDSTHSHRWT FT SLELVKGTYTTDDSPSDIAEIRLDKVVPLKENVKYAVRLRNYGSRTANGDGGMTTVQCP FT DGVTFTFSTCSLSSNGTNQTRGQIPQILYYRSEFDGDLQSQLLSKANEEDKNCSRALSV FT VSTVVRASKDLLHRALAVDADDIPELLSSSSLFSMLLPLIIAYIGPVAAAIPKVAVEVF FT GLVQQLLPSVAILNQKYAPPAFNPNQSTDSTTGNQPEQGLSACTTSSHYAVIESEHPYK FT PACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVLRLLIPVRTVQNSGYGPKLTSVHEN FT LNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFS FT PGPDEGVIQLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAALQVCKTHSGI FT LGKGLALSHSPTILEALEGNLPLQIQSNEQSFLDDFIACVPGSSGGRLARWLQPDSYAD FT PQKTSLILNKDDIRCGWPTTITVQTKDQYGDVVHVPNMKVEVKAVPVSQKKMSLQQDQA FT KKPQRIPGSPAVTAASSNTDMTYGGLASPKLDVSYEPMIVKEARYIAITMMKVYENYSF FT EELRFASPTPKRPSENMLIRVNNDGTYCANWTPGAIGLYTLHVTIDGIEIDAGLEVKVK FT DPPKGMIPPGTQLVKPKSEPQPNKVRKFVAKDSAGLRIRSHPSLQSEQIGIVKVNGTIT FT FIDEIHNDDGVWLRLNDETIKKYVPNMNGYTEAWCLSFNQHLGKSLLVPVDESKTNTDD FT FFKDINSCCPQEATMQEQDMPFLRGGPGMYKVVKTGPSGHNIRSCPNLRGIPIGMLVLG FT NKVKAVGEVTNSEGTWVQLDQNSMVEFCESDEGEAWSLARDRGGNQYLRHEDEQALLDQ FT NSQTPPPSPFSVQAFNKGASCSAQGFDYGLGNSKGDRGNISTSSKPASTSGKSELSSKH FT SRSLKPDGRMSRTTADQKKPRGTESLSASESLILKSDAAKLRSDSHSRSLSPNHNTLQT FT LKSDGRMPSSSRAESPGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTA FT PVKTKLDPPRERSKSDSYTLDPDTLRKKKMPLTEPLRGRSTSPKPKSVPKDSTDSPGSE FT NRAPSPHVVQENLHSEVVEVCTSSTLKTNSLTDSTCDDSSEFKSVDEGSNKVHFSIGKA FT PLKDEQEMRASPKISRKCANRHTRPKKEKSSFLFKGDGSKPLEPAKQAMSPSVAECARA FT VFASFLWHEGIVHDAMACSSFLKFHPELSKEHAPIRSSLNSQQPTEEKETKLKNRHSLE FT ISSALNMFNIAPHGPDISKMGSINKNKVLSMLKEPPLHEKCEDGKTETTFEMSMHNTMK FT SKSPLPLTLQHLVAFWEDISLATIKAASQNMIFPSPGSCAVLKKKECEKENKKSKKEKK FT KKEKAEVRPRGNLFGEMAQLAVGGPEKDTICELCGESHPYPVTYHMRQAHPGCGRYAGG FT QGYNSIGHFCGGWAGNCGDGGIGGSTWYLVCDRCREKYLREKQAAAREKVKQSRRKPMQ FT VKTPRALPTMEAHQVIKANALFLLSLSSAAEPSILCYHPAKPFQSQLPSVKEGISEDLP FT VKMPCLYLQTLARHHHENFVGYQDDNLFQDEMRYLRSTSVPAPYISVTPDASPNVFEEP FT ESNMKSMPPSLETSPITDTDLAKRTVFQRSYSVVASEYDKQHSILPARVKAIPRRRVNS FT GDTEVGSSLLRHPSPELSRLISAHSSLSKGERNFQWPVLAFVIQHHDLEGLEIAMKQAL FT RKSACRVFAMEAFNWLLCNVIQTTSLHDILWHFVASLTPAPVEPEEEEDEENKTSKENS FT EQEKDTRVCEHPLSDIVIAGEAAHPLPHTFHRLLQTISDLMMSLPSGSSLQQMALRCWS FT LKFKQSDHQFLHQSNVFHHINNILSKSDDGDSEESFSISIQSGFEAMSQELCIVMCLKD FT LTSIVDIKTSSRPAMIGSLTDGSTETFWESGDEDKNKTKNITINCVKGINARYVSVHVD FT NSRDLGNKVTSMTFLTGKAVEDLCRIKQVDLDSRHIGWVTSELPGGDNHIIKIELKGPE FT NTLRVRQVKVLGWKDGESTKIAGQISASVAQQRNCEAETLRVFRLITSQVFGKLISGDA FT EPTPEQEEKALLSSPEGEEKVYNATSDADLKEHMVGIIFSRSKLTNLQKQVCAHIVQAI FT RMEATRVREEWEHAISSKENANSQPNDEDASSDAYCFELLSMVLALSGSNVGRQYLAQQ FT LTLLQDLFSLLHTASPRVQRQVTSLLRRVLPEVTPSRLASIIGVKSLPPADISDIIHST FT EKGDWNKLGILDMFLGCIAKALTVQLKAKGTTITGTAGTTVGKGVTTVTLPMIFNSSYL FT RRGESHWWMKGSTPTQISEIIIKLIKDMAAGHLSEAWSRVTKNAIAETIIALTKMEEEF FT RSPVRCIATTRLWLALASLCVLDQDHVDRLSSGRWMGKDGQQKQMPMCDNHDDGETAAI FT ILCNVCGNLCTDCDRFLHLHRRTKTHQRQVFKEEEEAIKVDLHEGCGRTKLFWLMALAD FT SKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVCSDADCQEYAKIACSKT FT HPCGHPCGGVKNEEHCLPCLHGCDKSATSLKQDADDMCMICFTEALSAAPAIQLDCSHI FT FHLQCCRRVLENRWLGPRITFGFISCPICKNKINHIVLKDLLDPIKELYEDVRRKALMR FT LEYEGLHKSEAITTPGVRFYNDPAGYAMNRYAYYVCYKCRKAYFGGEARCDAEAGRGDD FT YDPRELICGACSDVSRAQMCPKHGTDFLEYKCRYCCSVAVFFCFGTTHFCNACHDDFQR FT MTSIPKEELPHCPAGPKGKQLEGTECPLHVVHPPTGEEFALGCGVCRNAHTF" FT mRNA complement(join(AC001226.1:76066..76902, FT AC001226.1:82406..82571,AC001226.1:83220..83327, FT AC001226.1:86967..87176,AC001226.1:88395..88502, FT AC001226.1:89627..89815,AC001226.1:90932..91035, FT AC001226.1:92578..92710,AC001226.1:93071..93199, FT AC001226.1:94005..94106,AC001226.1:96024..96143, FT AC001226.1:97401..97497,AC001226.1:98990..99273, FT AC001226.1:99974..100240,AC001226.1:102040..102120, FT AL359257.9:25855..25953,AL359257.9:26252..26491, FT AL359257.9:27928..27993,AL359257.9:30531..30755, FT AL359257.9:30941..31097,AL359257.9:32136..32296, FT AL359257.9:36588..36737,AL359257.9:37936..38135, FT AL359257.9:39210..39367,AL359257.9:42269..42436, FT AL359257.9:44462..44706,AL359257.9:45416..45585, FT AL359257.9:46474..48117,AL359257.9:70477..70599, FT AL359257.9:74440..74572,AL359257.9:75422..75646, FT AL359257.9:88300..88440,AL359257.9:89151..89267, FT AL359257.9:89950..90047,AL359257.9:93549..93664, FT AL359257.9:95266..95321,AL159154.16:2461..2676, FT AL159154.16:7785..7929,AL159154.16:9664..9836, FT AL159154.16:13633..13682,AL159154.16:16181..16268, FT AL159154.16:17000..17118,AL159154.16:18056..18281, FT AL159154.16:20155..20373,AL159154.16:21341..21441, FT AL159154.16:23219..23361,AL159154.16:26038..26216, FT AL159154.16:28224..28355,AL159154.16:29475..29681, FT AL159154.16:31854..32045,AL159154.16:33428..33649, FT AL159154.16:36830..37104,AL159154.16:37598..37790, FT AL159154.16:40678..40774,AL159154.16:41979..42062, FT AL159154.16:43406..43540,AL159154.16:45880..45971, FT AL159154.16:56983..57110,AL159154.16:57200..57325, FT AL159154.16:58380..58552,AL159154.16:62894..63047, FT AL159154.16:63683..63887,AL159154.16:69567..69684, FT AL159154.16:76178..76259,AL159154.16:77162..77281, FT AL159154.16:84883..84990,AL159154.16:94786..94887, FT AL159154.16:95533..95678,AL159154.16:102878..103082, FT AL159154.16:109398..109556,AL159154.16:112155..112319, FT AL159154.16:112898..113102,AL159154.16:113780..113856, FT AL159154.16:115378..115516,AL159154.16:115656..115729, FT AL159154.16:119568..119664,AL159154.16:121719..121790, FT AL159154.16:122023..122265,77847607..77847803, FT 77852893..77853046,77862296..77862511,77870734..77870809, FT 77900609..77900814,77901105..77901177)) FT /gene="AC001226.5" FT /locus_tag="AC001226.5-001" FT /product="novel protein" FT /note="match: cDNAs: Em:AB020723.1 Em:AF075587.1 FT Em:AF083244.1 Em:AK023888.1 Em:AK025299.1 Em:BC022619.1 FT Em:BC034100.1 Em:BC037971.1" FT /note="match: ESTs: Em:AA176067.1 Em:AA194512.1 FT Em:AA236471.1 Em:AA287538 Em:AA287538.1 Em:AA312827.1 FT Em:AA348130.1 Em:AA396070.1 Em:AA488899.1 Em:AA488967.1 FT Em:AA545634.1 Em:AA547620.1 Em:AA578559.1 Em:AA734728.1 FT Em:AA794392.1 Em:AI205089.1 Em:AI380181.1 Em:AI427221.1 FT Em:AI761205.1 Em:AL041775.1 Em:AL042591.1 Em:AL046362.1 FT Em:AL046363.1 Em:AL046735.1 Em:AL134630.1 Em:AL701151.1 FT Em:AL704331.1 Em:AL704422.1 Em:AL706888.1 Em:AL865784.1 FT Em:AU016979.1 Em:AU036081.1 Em:AU141436.1 Em:AU144641.1 FT Em:AU158999.1 Em:AU240395.1 Em:AW060295.1 Em:AW068653.1 FT Em:AW068654.1 Em:AW086424.1 Em:AW106226.1 Em:AW107953.1 FT Em:AW165993.1 Em:AW391684.1 Em:AW418339.1 Em:AW426995.1 FT Em:AW440465.1 Em:AW441131.1 Em:AW485738.1 Em:AW491600.1 FT Em:AW503973.1 Em:AW505373.1 Em:AW609667.1 Em:AW609682.1 FT Em:AW866511.1 Em:AW866590.1 Em:AW892805.1 Em:AW935046.1 FT Em:AW954594.1 Em:AW964053.1 Em:AW964505.1 Em:AW968937.1 FT Em:BB059590.2 Em:BB424418.1 Em:BE007025.1 Em:BE007848.1 FT Em:BE081150.1 Em:BE112881.1 Em:BE119322.1 Em:BE150458.1 FT Em:BE368973.1 Em:BE535941.1 Em:BE538774.1 Em:BE614958.1 FT Em:BE649603.1 Em:BE686263.1 Em:BE815141.1 Em:BE815143.1 FT Em:BE815176.1 Em:BE815384.1 Em:BE825496.1 Em:BE825521.1 FT Em:BE825548.1 Em:BE833940.1 Em:BE841205.1 Em:BE878486.1 FT Em:BE886946.1 Em:BE925820.1 Em:BE940722.1 Em:BE951767.1 FT Em:BF080906.1 Em:BF082488.1 Em:BF083274.1 Em:BF142945.1 FT Em:BF242034.1 Em:BF304027.1 Em:BF344699.1 Em:BF373985.1 FT Em:BF469588.1 Em:BF514836.1 Em:BF537239.1 Em:BF574171.1 FT Em:BF575098.1 Em:BF606964.1 Em:BF662898.1 Em:BF670799.1 FT Em:BF879639.1 Em:BF948651.1 Em:BF950020.1 Em:BF956048.1 FT Em:BF975890.1 Em:BF990098.1 Em:BG070742.1 Em:BG083658.1 FT Em:BG091563.1 Em:BG108656.1 Em:BG246721.1 Em:BG292778.1 FT Em:BG294071.1 Em:BG399615.1 Em:BG431735.1 Em:BG468581.1 FT Em:BG611405.1 Em:BG685124.1 Em:BG686737.1 Em:BG740625.1 FT Em:BG759429.1 Em:BG871812.1 Em:BG901059.1 Em:BG911017.1 FT Em:BG915741.1 Em:BG973536.1 Em:BI027800.1 Em:BI039901.1 FT Em:BI040842.1 Em:BI041280.1 Em:BI101896.1 Em:BI113217.1 FT Em:BI401114.1 Em:BI655508.1 Em:BI662628.1 Em:BI790327.1 FT Em:BI828665.1 Em:BI859607.1 Em:BI859936.1 Em:BI908491.1 FT Em:BJ004870.1 Em:BJ042867.1 Em:BM045347.1 Em:BM051979.1 FT Em:BM145645.1 Em:BM146792.1 Em:BM174892.1 Em:BM226215.1 FT Em:BM237430.1 Em:BM238561.1 Em:BM240076.1 Em:BM245124.1 FT Em:BM414719.1 Em:BM414741.1 Em:BM414773.1 Em:BM414792.1 FT Em:BM423221.1 Em:BM423302.1 Em:BM432104.1 Em:BM446128.1 FT Em:BM455738.1 Em:BM464209.1 Em:BM468370.1 Em:BM479042.1 FT Em:BM662246.1 Em:BM691604.1 Em:BM788156.1 Em:BM910075.1 FT Em:BM910563.1 Em:BM911214.1 Em:BM926142.1 Em:BQ008442.1 FT Em:BQ019702.1 Em:BQ025527.1 Em:BQ049194.1 Em:BQ063902.1 FT Em:BQ066905.1 Em:BQ175897.1 Em:BQ201485.1 Em:BQ229176.1 FT Em:BQ339357.1 Em:BQ443689.1 Em:BQ553553.1 Em:BQ571465.1 FT Em:BQ601322.1 Em:BQ721146.1 Em:BQ721568.1 Em:BU146129.1 FT Em:BU147423.1 Em:BU567893.1 Em:BU618933.1 Em:BU633966.1 FT Em:BU683499.1 Em:CA316790.1 Em:CA323280.1 Em:CA391747.1 FT Em:D80469.1 Em:D80472.1 Em:H22773.1 Em:H64629.1 Em:H65959.1 FT Em:N52657.1 Em:W44173.1 Em:W76419.1 Em:Z21226.1" FT misc_feature 77964380 FT /note="Clone_left_end: RP11-479J22" FT misc_feature 78001854 FT /note="Clone_right_end: RP11-81G4" FT misc_feature 78032903 FT /note="Clone_left_end: RP11-137M6" FT misc_feature 78033103..78226100 FT /note="annotated region of clone" FT mRNA join(78109859..78109959,78129992..78130053, FT 78130731..78130848,78133939..78133998,78137966..78138034, FT 78142430..78142468,78143506..78143586,78146259..78146324, FT 78163279..78163359,78165530..78165595,78171680..78171724, FT 78173464..78173523,78173824..78173883,78176200..78177270, FT 78178491..78178550,78182191..78182250,78183193..78183252, FT 78184182..78184241,78187026..78187075) FT /gene="SCEL" FT /locus_tag="RP11-137M6.1-003" FT /product="sciellin" FT /note="match: ESTs: Em:BG536948.1" FT /note="match: cDNAs: Em:BC020726.1" FT mRNA join(78109894..78109959,78129992..78130053, FT 78130731..78130848,78133939..78133998,78137966..78138034, FT 78141815..78141883,78142430..78142468,78143506..78143586, FT 78146259..78146324,78163279..78163359,78165530..78165595, FT 78171680..78171724,78173464..78173523,78173824..78173883, FT 78176200..78176259,78176789..78176848,78177211..78177270, FT 78178491..78178550,78182191..78182250,78183193..78183252, FT 78184182..78184241,78187026..78187076,78188028..78188090, FT 78191734..78191793,78191938..78191997,78192139..78192195, FT 78202082..78202144,78208514..78208585,78211255..78211329, FT 78214811..78214919,78216841..78216943,78218393..78219398) FT /gene="SCEL" FT /locus_tag="RP11-137M6.1-001" FT /product="sciellin" FT /note="match: ESTs: Em:AI370883.1 Em:BM973059.1 FT Em:BM976404.1 Em:BU684595.1" FT /note="match: cDNAs: Em:AF045941.1 Em:BC047536.1" FT mRNA join(78109895..78109959,78129992..78130053, FT 78130731..78130848,78133939..78133998,78137966..78138034, FT 78141815..78141883,78142430..78142468,78143506..78143586, FT 78146259..78146324,78163279..78163359,78165530..78165595, FT 78167649..78167708,78171680..78171724,78173464..78173523, FT 78173824..78173883,78176200..78176259,78176789..78176848, FT 78177211..78177270,78178491..78178550,78182191..78182250, FT 78183193..78183252,78184182..78184241,78187026..78187076, FT 78188028..78188090,78191734..78191793,78191938..78191997, FT 78192139..78192195,78202082..78202144,78208514..78208585, FT 78211255..78211329,78214811..78214919,78216841..78216943, FT 78218393..78218644) FT /gene="SCEL" FT /locus_tag="RP11-137M6.1-002" FT /product="sciellin" FT /note="match: cDNAs: Em:AK025320.1 Em:AK222720.1" FT CDS join(78130011..78130053,78130731..78130848, FT 78133939..78133998,78137966..78138034,78141815..78141883, FT 78142430..78142468,78143506..78143586,78146259..78146324, FT 78163279..78163359,78165530..78165595,78171680..78171724, FT 78173464..78173523,78173824..78173883,78176200..78176259, FT 78176789..78176848,78177211..78177270,78178491..78178550, FT 78182191..78182250,78183193..78183252,78184182..78184241, FT 78187026..78187076,78188028..78188090,78191734..78191793, FT 78191938..78191997,78192139..78192195,78202082..78202144, FT 78208514..78208585,78211255..78211329,78214811..78214919, FT 78216841..78216943,78218393..78218409) FT /gene="SCEL" FT /locus_tag="RP11-137M6.1-001" FT /standard_name="OTTHUMP00000018525" FT /product="sciellin" FT /note="match: proteins: Sw:O95171.1 Tr:Q5W0S9.1" FT /protein_id="CAH70475.1" FT /translation="MSNVTLRKMSPTGNEMKSTTQGTTRKQQDFHEVNKRRTFLQDNSW FT IKKRPEEEKDENYGRVVLNRHNSHDALDRKVNERDVPKATISRYSSDDTLDRISDRNDA FT AKTYKANTLDNQLTNRSMSMFRSLEVTKLQPGGSLNANTSNTIASTSATTPVKKKRQSW FT FPPPPPGYNASSSTGTRRREPGVHPPIPPKPSSPVSSPNQLRQDNRQIHPPKPGVYTET FT NRSAERNISEELDNLIKMNKSLNRNQGLDSLFRANPKVEEREKRAKSLESLIYMSTRTD FT KDGKGIQSLGSPIKVNQRTDKNEKGRQNLESVAKVNARMNKTSRRSEDLDNATEVNPKG FT HENTTGKKDLDGLIKVDPETNKNITRGQSLDNLIKVTPEVKRSNQGSKDLNNFIKVYPG FT TEKSTEGGQSLDSLIKVTPERNRTNQGNQDLENLIKVIPSANKSSEQGLDEHINVSPKA FT VKNTDGKQDLDKLIKVNPEIFTNNQRNQDLANLIKVNPAVIRNNQSQDLDNLIKVKPSA FT LRNTNRDQNLENLIEVNSHVSENKNGSSNTGAKQAGPQDTVVYTRTYVENSKSPKDGYQ FT ENISGKYIQTVYSTSDRSVIERDMCTYCRKPLGVETKMILDELQICCHSTCFKCEICKQ FT PLENLQAGDSIWIYRQTIHCEPCYSKIMAKWIP" FT CDS join(78130011..78130053,78130731..78130848, FT 78133939..78133998,78137966..78138034,78141815..78141883, FT 78142430..78142468,78143506..78143586,78146259..78146324, FT 78163279..78163359,78165530..78165595,78167649..78167708, FT 78171680..78171724,78173464..78173523,78173824..78173883, FT 78176200..78176259,78176789..78176848,78177211..78177270, FT 78178491..78178550,78182191..78182250,78183193..78183252, FT 78184182..78184241,78187026..78187076,78188028..78188090, FT 78191734..78191793,78191938..78191997,78192139..78192195, FT 78202082..78202144,78208514..78208585,78211255..78211329, FT 78214811..78214919,78216841..78216943,78218393..78218409) FT /gene="SCEL" FT /locus_tag="RP11-137M6.1-002" FT /standard_name="OTTHUMP00000018526" FT /product="sciellin" FT /note="match: proteins: Tr:Q53H61.1 Tr:Q5W0S8.1" FT /protein_id="CAH70476.1" FT /translation="MSNVTLRKMSPTGNEMKSTTQGTTRKQQDFHEVNKRRTFLQDNSW FT IKKRPEEEKDENYGRVVLNRHNSHDALDRKVNERDVPKATISRYSSDDTLDRISDRNDA FT AKTYKANTLDNQLTNRSMSMFRSLEVTKLQPGGSLNANTSNTIASTSATTPVKKKRQSW FT FPPPPPGYNASSSTGTRRREPGVHPPIPPKPSSPVSSPNQLRQDNRQIHPPKPGVYTET FT NRSAERNIRSQDLDNIVKVATSLQRSDKGEELDNLIKMNKSLNRNQGLDSLFRANPKVE FT EREKRAKSLESLIYMSTRTDKDGKGIQSLGSPIKVNQRTDKNEKGRQNLESVAKVNARM FT NKTSRRSEDLDNATEVNPKGHENTTGKKDLDGLIKVDPETNKNITRGQSLDNLIKVTPE FT VKRSNQGSKDLNNFIKVYPGTEKSTEGGQSLDSLIKVTPERNRTNQGNQDLENLIKVIP FT SANKSSEQGLDEHINVSPKAVKNTDGKQDLDKLIKVNPEIFTNNQRNQDLANLIKVNPA FT VIRNNQSQDLDNLIKVKPSALRNTNRDQNLENLIEVNSHVSENKNGSSNTGAKQAGPQD FT TVVYTRTYVENSKSPKDGYQENISGKYIQTVYSTSDRSVIERDMCTYCRKPLGVETKMI FT LDELQICCHSTCFKCEICKQPLENLQAGDSIWIYRQTIHCEPCYSKIMAKWIP" FT misc_feature 78158169 FT /note="Clone_right_end: RP11-479J22" FT mRNA join(78171163..78171250,78171680..78171724, FT 78173824..78173883,78176200..78176259,78182191..78182250, FT 78183193..78183252,78184182..78184241,78187026..78187076, FT 78188028..78188090,78191734..78191776) FT /gene="SCEL" FT /locus_tag="RP11-137M6.1-004" FT /product="sciellin" FT /note="match: ESTs: Em:AV704404.1" FT mRNA complement(join(78173932..78174149,78176271..78176385, FT 78178406..78178525,78180612..78180651)) FT /locus_tag="RP11-137M6.2-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AI798835.1" FT mRNA complement(join(78173890..78174149,78176271..78176385, FT 78180612..78180686)) FT /locus_tag="RP11-137M6.2-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AI221818.1" FT polyA_site 78187070 FT misc_feature 78215919 FT /note="Clone_left_end: RP11-408O13" FT polyA_signal 78218620..78218625 FT polyA_site 78218644 FT polyA_signal 78219365..78219370 FT polyA_signal 78219371..78219376 FT polyA_site 78219398 FT misc_feature 78226000 FT /note="Clone_right_end: RP11-137M6" FT misc_feature 78226101..78255255 FT /note="annotated region of clone" FT CDS 78233548..78233799 FT /pseudo FT /locus_tag="RP11-408O13.3-001" FT /product="SPTLC1 (serine palmitoyltransferase, long chain FT base subunit 1) pseudogene" FT /note="match: proteins: Sw:O15269 Sw:O35704 Sw:O54695 FT Tr:Q96IX6" FT mRNA join(78236635..78236800,78236924..78237275) FT /locus_tag="RP11-408O13.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BF873765.1 Em:BF873770.1 FT Em:BF873774.1" FT misc_feature 78245078 FT /note="Clone_left_end: RP11-188A23" FT misc_feature 78255256..78399741 FT /note="annotated region of clone" FT mRNA join(78272023..78272063,78293667..78293806, FT 78318418..78318567,78320649..>78320789) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-003" FT /product="SLAIN motif family, member 1" FT /note="match: ESTs: Em:AW452121.1" FT mRNA join(78272558..78272674,78293667..78293806, FT 78317151..78317300,78318418..78318567,78320649..>78320990) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-005" FT /product="SLAIN motif family, member 1" FT /note="match: ESTs: Em:BG835310.1 Em:BI547110.1 FT Em:BQ433296.1 Em:D81144.1" FT mRNA join(78272558..78272674,78293667..78293806, FT 78318418..78318567,78320649..78320990,78327338..>78327417) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-004" FT /product="SLAIN motif family, member 1" FT /note="match: ESTs: Em:BG391962.1 Em:BI819248.1" FT mRNA join(78273017..78273358,78293667..78293844, FT 78318327..78318567,78320649..>78320697) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-006" FT /product="SLAIN motif family, member 1" FT /note="match: ESTs: Em:BG706765.1 Em:BI599720.1 FT Em:BI670499.1" FT CDS join(78293764..78293806,78318418..78318567, FT 78320649..>78320789) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-003" FT /standard_name="OTTHUMP00000018530" FT /product="SLAIN motif family, member 1" FT /protein_id="CAI12503.1" FT /translation="MEAARRSLCFRLEQGYTSRGSPLSPQSSIDSELSTSELEDDSISM FT GYKLQDLTDVQIMARLQEESLRQDYASTSASVSRHSSSVSLSSGKKGTCSDQEYDQYSL FT EDEEEFD" FT CDS join(78293764..78293806,78317151..78317300, FT 78318418..78318567,78320649..>78320990) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-005" FT /standard_name="OTTHUMP00000018532" FT /product="SLAIN motif family, member 1" FT /protein_id="CAI12504.1" FT /translation="MEAARRSLCFRLEQASRWRSLFSSTASLAFPYSPVARLSPYSNGI FT NTPSFSKTSNKAILTPEKTGYTSRGSPLSPQSSIDSELSTSELEDDSISMGYKLQDLTD FT VQIMARLQEESLRQDYASTSASVSRHSSSVSLSSGKKGTCSDQEYDQYSLEDEEEFDHL FT PPPQPRLPRCSPFQRGIPHSQTFSSIRECRRSPSSQYFPSNNYQQQQYYSPQAQTPDQQ FT PNRTNG" FT CDS join(78293764..78293806,78318418..78318567, FT 78320649..78320990,78327338..>78327417) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-004" FT /standard_name="OTTHUMP00000018531" FT /product="SLAIN motif family, member 1" FT /protein_id="CAI12505.1" FT /translation="MEAARRSLCFRLEQGYTSRGSPLSPQSSIDSELSTSELEDDSISM FT GYKLQDLTDVQIMARLQEESLRQDYASTSASVSRHSSSVSLSSGKKGTCSDQEYDQYSL FT EDEEEFDHLPPPQPRLPRCSPFQRGIPHSQTFSSIRECRRSPSSQYFPSNNYQQQQYYS FT PQAQTPDQQPNRTNGDKLRRSMPNLARMPSTTAISSNISSPV" FT mRNA join(78315354..78315575,78318418..78318567, FT 78320649..78320990,78327338..78327493,78334963..>78335125) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-002" FT /product="SLAIN motif family, member 1" FT /note="match: ESTs: Em:AA019671.1 Em:BI544378.1 FT Em:BI544660.1 Em:BI551356.1 Em:BI753838.1" FT mRNA join(78317300..78317300,78318418..78318567, FT 78320649..78320990,78327338..78327493,78334963..78335245, FT 78337280..78338362) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-001" FT /product="SLAIN motif family, member 1" FT /note="match: ESTs: Em:DB057024.1" FT /note="match: cDNAs: Em:AK054608.1" FT CDS join(78318363..78318567,78320649..>78320697) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-006" FT /standard_name="OTTHUMP00000018533" FT /product="SLAIN motif family, member 1" FT /protein_id="CAI12507.1" FT /translation="MYRYQSCRWKNTLFLCVSGYTSRGSPLSPQSSIDSELSTSELEDD FT SISMGYKLQDLTDVQIMARLQEESLRQDYASTSASVSRH" FT CDS join(78318507..78318567,78320649..78320990, FT 78327338..78327493,78334963..>78335125) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-002" FT /standard_name="OTTHUMP00000018529" FT /product="SLAIN motif family, member 1" FT /protein_id="CAI12508.1" FT /translation="MGYKLQDLTDVQIMARLQEESLRQDYASTSASVSRHSSSVSLSSG FT KKGTCSDQEYDQYSLEDEEEFDHLPPPQPRLPRCSPFQRGIPHSQTFSSIRECRRSPSS FT QYFPSNNYQQQQYYSPQAQTPDQQPNRTNGDKLRRSMPNLARMPSTTAISSNISSPVTV FT RNSQSFDSSLHGAGNGISRIQSCIPSPGQLQHRVHSVGHFPVSIRQPLKATAYVSPTVQ FT GSSNMPLSNGLQLYSNTG" FT CDS join(78318507..78318567,78320649..78320990, FT 78327338..78327493,78334963..78335245,78337280..78337355) FT /gene="SLAIN1" FT /locus_tag="RP11-188A23.1-001" FT /standard_name="OTTHUMP00000018528" FT /product="SLAIN motif family, member 1" FT /note="match: proteins: Tr:Q5R6Z0.1 Tr:Q96NV0.1" FT /protein_id="CAI12509.1" FT /translation="MGYKLQDLTDVQIMARLQEESLRQDYASTSASVSRHSSSVSLSSG FT KKGTCSDQEYDQYSLEDEEEFDHLPPPQPRLPRCSPFQRGIPHSQTFSSIRECRRSPSS FT QYFPSNNYQQQQYYSPQAQTPDQQPNRTNGDKLRRSMPNLARMPSTTAISSNISSPVTV FT RNSQSFDSSLHGAGNGISRIQSCIPSPGQLQHRVHSVGHFPVSIRQPLKATAYVSPTVQ FT GSSNMPLSNGLQLYSNTGIPTPNKAAASGIMGRSALPRPSLAINGSNLPRSKIAQPVRS FT FLQPPKPLSSLSTLRDGNWRDGCY" FT polyA_signal 78338343..78338348 FT polyA_site 78338362 FT misc_feature 78394318 FT /note="Clone_right_end: RP11-408O13" FT misc_feature 78399542 FT /note="Clone_left_end: RP11-318G21" FT misc_feature 78399742..78582978 FT /note="annotated region of clone" FT mRNA join(78402357..78402550,78403163..78403237, FT 78404688..78404738,78407500..78407562,78407868..78408085) FT /locus_tag="RP11-318G21.3-001" FT /product="novel transcript" FT /note="match: ESTs: Em:BI459298.1" FT misc_feature 78421931..78422256 FT /note="Sequence from AC018674 sequenced by WUGSC" FT polyA_site complement(78469616) FT polyA_signal complement(78469639..78469644) FT mRNA complement(join(78469624..78472469,78473994..78474102, FT 78474656..78474789,78475193..78475342,78477291..78477495, FT 78477630..78477742,78492226..78492945)) FT /gene="EDNRB" FT /locus_tag="RP11-318G21.1-003" FT /product="endothelin receptor type B" FT /note="match: cDNAs: Em:AB209198.1 Em:BC014472.1 FT Em:CR605578.1 Em:CR608540.1 Em:S44866.1" FT CDS complement(join(78472335..78472469,78473994..78474102, FT 78474656..78474789,78475193..78475342,78477291..78477495, FT 78477630..78477742,78492226..78492708)) FT /gene="EDNRB" FT /locus_tag="RP11-318G21.1-003" FT /standard_name="OTTHUMP00000178736" FT /product="endothelin receptor type B" FT /note="match: proteins: Sw:P21451.2 Sw:P24530.1 Sw:P48302.1 FT Sw:P56497.3 Tr:Q8K1V9.1 Tr:Q9UD23.1" FT /protein_id="CAM16893.1" FT /translation="MQPPPSLCGRALVALVLACGLSRIWGEERGFPPDRATPLLQTAEI FT MTPPTKTLWPKGSNASLARSLAPAEVPKGDRTAGSPPRTISPPPCQGPIEIKETFKYIN FT TVVSCLVFVLGIIGNSTLLRIIYKNKCMRNGPNILIASLALGDLLHIVIDIPINVYKLL FT AEDWPFGAEMCKLVPFIQKASVGITVLSLCALSIDRYRAVASWSRIKGIGVPKWTAVEI FT VLIWVVSVVLAVPEAIGFDIITMDYKGSYLRICLLHPVQKTAFMQFYKTAKDWWLFSFY FT FCLPLAITAFFYTLMTCEMLRKKSGMQIALNDHLKQRREVAKTVFCLVLVFALCWLPLH FT LSRILKLTLYNQNDPNRCELLSFLLVLDYIGINMASLNSCINPIALYLVSKRFKNCFKS FT CLCCWCQSFEEKQSLEEKQSCLKFKANDHGYDNFRSSNKYSSS" FT mRNA complement(join(78492474..78492759,78493142..78493498)) FT /gene="EDNRB" FT /locus_tag="RP11-318G21.1-002" FT /product="endothelin receptor type B" FT /note="match: ESTs: Em:AU135621.1" FT mRNA complement(join(78469616..78472469,78473994..78474102, FT 78474656..78474789,78475193..78475342,78477291..78477495, FT 78477630..78477742,78492226..78492759,78493532..78493903)) FT /gene="EDNRB" FT /locus_tag="RP11-318G21.1-001" FT /product="endothelin receptor type B" FT /note="match: ESTs: Em:AA651686 Em:AI567763 Em:AL571072 FT Em:AL571798 Em:AL699988 Em:AW665874 Em:BE837570 Em:BF109511 FT Em:BG217179 Em:BG620583 Em:BG769122 Em:BI520706 Em:BI858627 FT Em:BM918983 Em:N36494" FT /note="match: cDNAs: Em:AF114165 Em:BC014472 Em:D90402 FT Em:E07650 Em:L06623 Em:M74921 Em:S57283 Em:X99250" FT CDS complement(join(78472335..78472469,78473994..78474102, FT 78474656..78474789,78475193..78475342,78477291..78477495, FT 78477630..78477742,78492226..78492759,78493532..78493750)) FT /gene="EDNRB" FT /locus_tag="RP11-318G21.1-001" FT /standard_name="OTTHUMP00000018534" FT /product="endothelin receptor type B" FT /note="match: proteins: Tr:Q5W0G9.1" FT /protein_id="CAH72430.1" FT /translation="MNKSTCLMAAETPSKRWRLHCLAFSQRFVRAGPACSSREACSSPR FT AGWNPAGFRLPGRWSPFVALHLVCQIREALKLRSGHRTPSGAGSSMQPPPSLCGRALVA FT LVLACGLSRIWGEERGFPPDRATPLLQTAEIMTPPTKTLWPKGSNASLARSLAPAEVPK FT GDRTAGSPPRTISPPPCQGPIEIKETFKYINTVVSCLVFVLGIIGNSTLLRIIYKNKCM FT RNGPNILIASLALGDLLHIVIDIPINVYKLLAEDWPFGAEMCKLVPFIQKASVGITVLS FT LCALSIDRYRAVASWSRIKGIGVPKWTAVEIVLIWVVSVVLAVPEAIGFDIITMDYKGS FT YLRICLLHPVQKTAFMQFYKTAKDWWLFSFYFCLPLAITAFFYTLMTCEMLRKKSGMQI FT ALNDHLKQRREVAKTVFCLVLVFALCWLPLHLSRILKLTLYNQNDPNRCELLSFLLVLD FT YIGINMASLNSCINPIALYLVSKRFKNCFKSCLCCWCQSFEEKQSLEEKQSCLKFKAND FT HGYDNFRSSNKYSSS" FT mRNA complement(join(78513297..78514128,78518940..78519009)) FT /locus_tag="RP11-318G21.4-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BG436360.1 Em:BM557607.1" FT misc_feature 78525069 FT /note="Clone_left_end: RP11-267I18" FT mRNA complement(join(78563507..78563743,78564473..78564781)) FT /locus_tag="RP11-318G21.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:BI825933.1" FT misc_feature 78582878 FT /note="Clone_right_end: RP11-318G21" FT misc_feature 78582979..78693044 FT /note="annotated region of clone" FT mRNA join(78604115..78604215,78605998..78606119, FT 78611331..78611354) FT /locus_tag="RP11-267I18.1-002" FT /product="novel transcript" FT /note="match: ESTs: Em:AI377302.1" FT mRNA join(78605071..78605132,78605998..78606119, FT 78611331..78611354) FT /locus_tag="RP11-267I18.1-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AA906842.1" FT misc_feature 78692845 FT /note="Clone_left_end: RP11-203P2" FT misc_feature 78693045..78866259 FT /note="annotated region of clone" FT misc_feature 78710985 FT /note="Clone_right_end: RP11-267I18" FT mRNA join(78763743..78763831,78848388..78848472) FT /locus_tag="RP11-203P2.1-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AL706733.1 Em:AV723416.1 FT Em:AV723850.1 Em:BI821756.1" FT misc_feature 78800857 FT /note="Clone_left_end: RP11-149J12" FT mRNA complement(join(78849855..78850001,78851455..78851649)) FT /locus_tag="RP11-203P2.2-001" FT /product="putative novel transcript" FT /note="match: ESTs: Em:AA885116" FT misc_feature 78866159 FT /note="Clone_right_end: RP11-203P2" FT misc_feature 78891418..79058913 FT /note="annotated region of clone" FT misc_feature 78891418 FT /note="Clone_left_end: RP11-388E20" FT misc_feature 78959997 FT /note="Clone_right_end: RP11-149J12" FT CDS 78996958..78997327 FT /pseudo FT /locus_tag="RP11-388E20.1-001" FT /product="ribosomal protein L31 (RPL31) pseudogene" FT /note="match: proteins: Sw:P62899 Sw:P62900 Sw:P62902 FT Sw:Q90YT7 Tr:Q9CY93" FT misc_feature 79056914 FT /note="Clone_left_end: RP11-52L5" FT misc_feature 79058914..79214215 FT /note="annotated region of clone" FT CDS 79062317..>79062648 FT /pseudo FT /locus_tag="RP11-52L5.1-001" FT /product="transcription elongation factor B (SIII), FT polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene" FT /note="match: proteins: Sw:P83941 Sw:Q15369 Tr:Q9BKS1 FT Tr:Q9V8V2" FT mRNA complement(join(79188426..79191257,79209245..79209333, FT 79212958..79213206,AL139319.16:4042..4133, FT AL139319.16:6782..6917,AL139319.16:20969..21099)) FT /gene="C13orf7" FT /locus_tag="RP11-52L5.5-001" FT /product="chromosome 13 open reading frame 7" FT /note="match: ESTs: Em:AI201144 Em:AI377424 Em:AI594710 FT Em:AL527144 Em:AW503438 Em:AW504541 Em:AW967442 Em:BB489824 FT Em:BB493044 Em:BF940261 Em:BG076408 Em:BG282581 Em:BG292548 FT Em:BG741490 Em:BG772588 Em:BG772918 Em:BI089587 Em:BI460637 FT Em:BI465033 Em:BI550796 Em:BI559589 Em:BI562500 Em:BI917892 FT Em:BM474679 Em:BM543720 Em:BM674566 Em:BM923609 Em:BM970618 FT Em:BM995757" FT /note="match: cDNAs: Em:AK013314 Em:AK020974 Em:AK023511 FT Em:AL136651 Em:BC028586" FT CDS complement(join(79189715..79191257,79209245..79209333, FT 79212958..79213206,AL139319.16:4042..4133, FT AL139319.16:6782..6917,AL139319.16:20969..21040)) FT /gene="C13orf7" FT /locus_tag="RP11-52L5.5-001" FT /standard_name="OTTHUMP00000018536" FT /product="chromosome 13 open reading frame 7" FT /note="match: proteins: Sw:Q5W0B1 Sw:Q5W0B1 Sw:Q5W0B1 FT Sw:Q8K2Y0 Sw:Q8K2Y0" FT /protein_id="CAI15183.1" FT /translation="MAQTVQNVTLSLTLPITCHICLGKVRQPVICINNHVFCSICIDLW FT LKNNSQCPACRVPITPENPCKEIIGGTSESEPMLSHTVRKHLRKTRLELLHKEYEDEID FT CLQKEVEELKSKNLSLESQIKTILDPLTLVQGNQNEDKHLVTDNPSKINPETVAEWKKK FT LRTANEIYEKVKDDVDKLKEANKKLKLENGGLVRENLRLKAEVDNRSPQKFGRFAVAAL FT QSKVEQYERETNRLKKALERSDKYIEELESQVAQLKNSSEEKEAMNSICQTALSADGKG FT SKGSEEDVVSKNQGDSARKQPGSSTSSSSHLAKPSSSRLCDTSSARQESTSKADLNCSK FT NKDLYQEQVEVMLDVTDTSMDTYLEREWGNKPSDCVPYKDEELYDLPAPCTPLSLSCLQ FT LSTPENRESSVVQAGGSKKHSNHLRKLVFDDFCDSSNVSNKDSSEDDISRSENEKKSEC FT FSSPKTGFWDCCSTSYAQNLDFESSEGNTIANSVGEISSKLSEKSGLCLSKRLNSIRSF FT EMNRTRTSSEASMDAAYLDKISELDSMMSESDNSKSPCNNGFKSLDLDGLSKSSQGSEF FT LEEPDKLEEKTELNLSKGSLTNDQLENGSEWKPTSFFLLSPSDQEMNEDFSLHSSSCPV FT TNEIKPPSCLFQTEFSQGILLSSSHRLFEDQRFGSSLFKMSSEMHSLHNHLQSPWSTSF FT VPEKRNKNVNQSTKRKIQSSLSSASPSKATKS" FT misc_feature 79097385 FT /note="Clone_right_end: RP11-388E20" FT misc_feature 79120165 FT /note="Clone_left_end: RP11-131J24" FT mRNA join(79152611..79152798,79179436..79179579, FT 79181107..79181231) FT /locus_tag="RP11-52L5.4-001" FT /product="novel transcript" FT /note="match: ESTs: Em:AV723416.1 Em:AV723850.1 FT Em:AW957148.1" FT misc_feature 79168292..79168564 FT /note="Sequence from overlapping clone bA131J24(AL139319). FT Assembly confirmed by restriction digest" FT misc_feature 79174241..79174253 FT /note="Single clone region. Sequence from reads from a FT short insert library derived from a single pUC FT clone.Restriction digest data confirm the assembly" FT mRNA complement(join(79173227..79176686,79177339..79177695)) FT /gene="POU4F1" FT /locus_tag="RP11-52L5.2-001" FT /product="POU class 4 homeobox 1" FT /note="match: ESTs: Em:AA779554 Em:AI039110 Em:BE109046 FT Em:BI351020 Em:BI475416 Em:BI533788 Em:BI734030 Em:BI839793 FT Em:BM680352 Em:BM714015 Em:BM724195 Em:BM930796 FT Em:BQ188526" FT /note="match: cDNAs: Em:AF196575 Em:L20433" FT CDS complement(join(79175550..79176686,79177339..79177461)) FT /gene="POU4F1" FT /locus_tag="RP11-52L5.2-001" FT /standard_name="OTTHUMP00000018535" FT /product="POU class 4 homeobox 1" FT /note="match: proteins: Sw:P17208 Sw:Q01851 Tr:Q9QVZ9" FT /protein_id="CAI15184.1" FT /translation="MMSMNSKQPHFAMHPTLPEHKYPSLHSSSEAIRRACLPTPPLQSN FT LFASLDETLLARAEALAAVDIAVSQGKSHPFKPDATYHTMNSVPCTSTSTVPLAHHHHH FT HHHHQALEPGDLLDHISSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGP FT GGGGGGGPGGGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAAAAAMNMPSGLPHPGLVAA FT AAHHGAAAAAAAAAAGQVAAASAAAAVVGAAGLASICDSDTDPRELEAFAERFKQRRIK FT LGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQ FT REKMNKPELFNGGE